# Contreras-Moreira,B. (2010) 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic Acids Research, 38: D91-D97 # Thu Dec 21 12:55:20 2023 # Legend: DG(C1):DC(D12) corresponds to a GC base pair including nucleotide 1 from chain C # and nucleotide 12 from chain D found in the original Protein Data Bank coordinates. # WARNING: check out base numbers in case there are breaks (missing unpaired nucleotides) with respect to original PDB coordinates >10mh_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND HEMIMETHYLATED DNA CONTAINING 5,6-DIHYDRO-5-AZACYTOSINE AT THE TARGET organism=Haemophilus haemolyticus DNA sequence DC(B402):DG(C433) DC(B403):DG(C432) DA(B404):DT(C431) DT(B405):DA(C430) DG(B406):DC(C429) 5CM(B407):DG(C428) DG(B408):5NC(C427) DC(B409):DG(C426) DT(B410):DA(C425) DG(B411):DC(C424) DA(B412):DT(C423) DC(B413):DG(C422) chainA ( 81) CYS81 0 0 0 0 0 0 7 0 0 0 0 0 ( 86) ILE86 0 0 0 0 0 0 0 0 3 1 0 0 ( 87) SER87 0 0 0 0 0 6 0 6 0 0 0 0 (119) GLU119 0 0 0 0 0 0 11 0 0 0 0 0 (121) VAL121 0 0 0 0 0 0 5 0 0 0 0 0 (163) ARG163 0 0 0 0 0 0 4 0 0 0 0 0 (165) ARG165 0 0 0 0 0 0 9 0 0 0 0 0 (237) GLN237 0 0 0 0 0 42 7 31 0 0 0 0 (239) GLU239 0 0 0 0 0 8 0 0 0 0 0 0 (240) ARG240 0 0 0 0 0 0 0 11 6 0 0 0 (260) ALA260 0 0 0 1 0 0 0 0 0 0 0 0 (304) ASN304 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgeRiystrgiaitlsaygggifAktggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy >1a02_FJN:p53-like_transcription_factors;E_set_domains;A_DNA-binding_domain_in_eukaryotic_transcription_factors;"Winged_helix"_DNA-binding_domain;Leucine_zipper_domain; title=STRUCTURE OF THE DNA BINDING DOMAINS OF NFAT, FOS AND JUN BOUND TO DNA organism=HOMO SAPIENS DNA sequence DG(A4003):DC(B5020) DG(A4004):DC(B5019) DA(A4005):DT(B5018) DA(A4006):DT(B5017) DA(A4007):DT(B5016) DA(A4008):DT(B5015) DT(A4009):DA(B5014) DT(A4010):DA(B5013) DT(A4011):DA(B5012) DG(A4012):DC(B5011) DT(A4013):DA(B5010) DT(A4014):DA(B5009) DT(A4015):DA(B5008) DC(A4016):DG(B5007) DA(A4017):DT(B5006) DT(A4018):DA(B5005) DA(A4019):DT(B5004) DG(A4020):DC(B5003) chainN ( 23) ARG421 5 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) TYR424 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLU427 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG430 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG537 0 0 0 0 0 1 2 3 0 0 0 0 0 0 0 0 0 0 (173) GLN571 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG572 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 8) ASN147 0 0 0 0 0 0 0 0 0 0 0 0 4 8 8 5 0 0 ( 11) ALA150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 12) ALA151 0 0 0 0 0 0 0 0 0 0 0 1 2 0 1 0 0 0 ( 16) ARG155 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 chainJ ( 6) ASN272 0 0 0 0 0 0 0 1 4 7 0 0 0 0 0 0 0 0 ( 9) ALA275 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 13) SER279 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 14) ARG280 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 prot.sequence rrirrerNkmAAaksRnrrreltdtlqaetdqledeksalqteianllkekek/rkrmrNriAaskSRkrkleriarleekvktlkaqnselastanmlreqvaql/wplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQRsahelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv >1a02_J:Leucine_zipper_domain;A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=STRUCTURE OF THE DNA BINDING DOMAINS OF NFAT, FOS AND JUN BOUND TO DNA organism=HOMO SAPIENS DNA sequence DG(A4003):DC(B5020) DG(A4004):DC(B5019) DA(A4005):DT(B5018) DA(A4006):DT(B5017) DA(A4007):DT(B5016) DA(A4008):DT(B5015) DT(A4009):DA(B5014) DT(A4010):DA(B5013) DT(A4011):DA(B5012) DG(A4012):DC(B5011) DT(A4013):DA(B5010) DT(A4014):DA(B5009) DT(A4015):DA(B5008) DC(A4016):DG(B5007) DA(A4017):DT(B5006) DT(A4018):DA(B5005) DA(A4019):DT(B5004) DG(A4020):DC(B5003) chainJ ( 6) ASN272 0 0 0 0 0 0 0 1 4 7 0 0 0 0 0 0 0 0 ( 9) ALA275 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 13) SER279 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 14) ARG280 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 prot.sequence rkrmrNriAaskSRkrkleriarleekvktlkaqnselastanmlreqvaql >1a0a_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO4/DNA COMPLEX organism=Saccharomyces cerevisiae DNA sequence DC(C1):DG(D17) DT(C2):DA(D16) DC(C3):DG(D15) DA(C4):DT(D14) DC(C5):DG(D13) DA(C6):DT(D12) DC(C7):DG(D11) DG(C8):DC(D10) DT(C9):DA(D9) DG(C10):DC(D8) DG(C11):DC(D7) DG(C12):DC(D6) DA(C13):DT(D5) DC(C14):DG(D4) DT(C15):DA(D3) DA(C16):DT(D2) DG(C17):DC(D1) chainA ( 2) LYS1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) HIS5 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 ( 10) GLU9 0 0 0 0 12 14 0 0 0 0 0 0 0 0 0 0 0 ( 13) ARG12 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ARG13 0 0 0 0 0 1 5 6 0 0 0 0 0 0 0 0 0 chainB ( 3) ARG2 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 ( 6) HIS5 0 0 0 0 0 0 0 0 12 10 13 0 0 0 0 0 0 ( 7) LYS6 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 10) GLU9 0 0 0 0 0 0 0 0 5 14 22 0 0 0 0 0 0 ( 13) ARG12 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 14) ARG13 0 0 0 0 0 1 7 7 2 0 0 0 0 0 0 0 0 prot.sequence mKResHkhaEqaRRnrlavalhelaslipaewkqqnvsaapskattveaacryirhlqqngst/mkResHKhaEqaRRnrlavalhelaslipaewkqqnvsaapskattveaacryirhlqqngst >1a0a_B:HLH,_helix-loop-helix_DNA-binding_domain; title=PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO4/DNA COMPLEX organism=Saccharomyces cerevisiae DNA sequence DC(D1):DG(C17) DT(D2):DA(C16) DA(D3):DT(C15) DG(D4):DC(C14) DT(D5):DA(C13) DC(D6):DG(C12) DC(D7):DG(C11) DC(D8):DG(C10) DA(D9):DT(C9) DC(D10):DG(C8) DG(D11):DC(C7) DT(D12):DA(C6) DG(D13):DC(C5) DT(D14):DA(C4) DG(D15):DC(C3) DA(D16):DT(C2) DG(D17):DC(C1) chainB ( 3) ARG2 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 ( 6) HIS5 0 0 0 0 0 0 13 10 12 0 0 0 0 0 0 0 0 ( 7) LYS6 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 10) GLU9 0 0 0 0 0 0 22 14 5 0 0 0 0 0 0 0 0 ( 13) ARG12 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 14) ARG13 0 0 0 0 0 0 0 0 2 7 7 1 0 0 0 0 0 prot.sequence mkResHKhaEqaRRnrlavalhelaslipaewkqqnvsaapskattveaacryirhlqqngst >1a1f_A:beta-beta-alpha_zinc_fingers; title=DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE) organism=Mus musculus DNA sequence DG(C52):DC(B11) DG(C53):DC(B10) DT(C54):DA(B9) DC(C55):DG(B8) DC(C56):DG(B7) DC(C57):DG(B6) DA(C58):DT(B5) DC(C59):DG(B4) DG(C60):DC(B3) DC(C61):DG(B2) chainA ( 16) ASP118 0 10 1 0 0 0 0 0 0 0 ( 18) SER120 7 5 0 0 0 0 0 0 0 0 ( 19) ASN121 0 1 10 4 0 0 0 0 0 0 ( 22) ARG124 0 0 4 12 15 0 0 0 0 0 ( 44) ARG146 0 0 0 2 10 6 0 0 0 0 ( 45) SER147 0 0 1 0 0 0 0 0 0 0 ( 46) ASP148 0 0 10 5 2 0 0 0 0 0 ( 47) HIS149 0 0 0 0 0 11 24 0 0 0 ( 50) THR152 0 0 0 0 0 0 1 0 0 0 ( 72) ARG174 0 0 0 0 0 0 8 11 17 0 ( 73) SER175 0 0 0 0 1 1 0 0 0 0 ( 74) ASP176 0 0 0 0 0 4 5 1 0 0 ( 75) GLU177 0 0 0 0 0 0 0 0 6 3 ( 78) ARG180 0 0 0 0 0 0 0 0 4 12 prot.sequence rpyacpvescdrrfsDsSNltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRSDErkRhtkihl >1a1g_A:beta-beta-alpha_zinc_fingers; title=DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE) organism=Mus musculus DNA sequence DG(B2):DC(C61) DC(B3):DG(C60) DG(B4):DC(C59) DT(B5):DA(C58) DG(B6):DC(C57) DG(B7):DC(C56) DG(B8):DC(C55) DC(B9):DG(C54) DG(B10):DC(C53) DT(B11):DA(C52) chainA ( 18) SER120 0 0 0 0 0 0 0 0 0 1 ( 19) ASN121 0 0 0 0 0 0 2 9 0 0 ( 22) ARG124 0 0 0 0 0 10 11 4 0 0 ( 44) ARG146 0 0 0 0 11 12 4 0 0 0 ( 46) ASP148 0 0 0 0 0 2 8 3 0 0 ( 47) HIS149 0 0 0 28 12 0 0 0 0 0 ( 50) THR152 0 0 0 1 0 0 0 0 0 0 ( 72) ARG174 0 16 14 10 0 0 0 0 0 0 ( 74) ASP176 0 0 1 4 1 0 0 0 0 0 ( 75) GLU177 1 5 0 0 0 0 0 0 0 0 ( 78) ARG180 12 9 0 0 0 0 0 0 0 0 prot.sequence rpyacpvescdrrfsdsSNltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihl >1a1h_A:C2H2_and_C2HC_zinc_fingers; title=QGSR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE) organism=Mus musculus DNA sequence DG(C52):DC(B11) DT(C53):DA(B10) DG(C54):DC(B9) DC(C55):DG(B8) DC(C56):DG(B7) DC(C57):DG(B6) DA(C58):DT(B5) DC(C59):DG(B4) DG(C60):DC(B3) DC(C61):DG(B2) chainA ( 16) GLN118 4 11 11 0 0 0 0 0 0 0 ( 19) SER121 0 0 3 0 0 0 0 0 0 0 ( 22) ARG124 0 0 4 11 12 0 0 0 0 0 ( 44) ARG146 0 0 0 2 13 12 0 0 0 0 ( 45) SER147 0 0 1 0 0 0 0 0 0 0 ( 46) ASP148 0 0 4 6 1 0 0 0 0 0 ( 47) HIS149 0 0 0 0 0 11 26 0 0 0 ( 50) THR152 0 0 0 0 0 0 1 0 0 0 ( 72) ARG174 0 0 0 0 0 0 11 13 16 0 ( 74) ASP176 0 0 0 0 0 1 5 1 0 0 ( 75) GLU177 0 0 0 0 0 0 0 0 6 1 ( 78) ARG180 0 0 0 0 0 0 0 0 8 14 prot.sequence rpyacpvescdrrfsQsgSltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlr >1a1i_A:beta-beta-alpha_zinc_fingers; title=RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE) organism=Mus musculus DNA sequence DG(C52):DC(B11) DT(C53):DA(B10) DG(C54):DC(B9) DC(C55):DG(B8) DC(C56):DG(B7) DC(C57):DG(B6) DA(C58):DT(B5) DC(C59):DG(B4) DG(C60):DC(B3) DC(C61):DG(B2) chainA ( 16) ARG118 0 0 4 0 0 0 0 0 0 0 ( 19) ASP121 0 0 8 0 0 0 0 0 0 0 ( 22) ARG124 0 0 7 11 8 0 0 0 0 0 ( 44) ARG146 0 0 0 2 12 12 0 0 0 0 ( 45) SER147 0 0 1 0 0 0 0 0 0 0 ( 46) ASP148 0 0 4 7 1 0 0 0 0 0 ( 47) HIS149 0 0 0 0 0 10 26 0 0 0 ( 50) THR152 0 0 0 0 0 0 1 0 0 0 ( 72) ARG174 0 0 0 0 0 0 12 13 13 0 ( 74) ASP176 0 0 0 0 0 1 6 1 0 0 ( 75) GLU177 0 0 0 0 0 0 0 0 6 1 ( 78) ARG180 0 0 0 0 0 0 0 0 6 11 prot.sequence rpyacpvescdrrfsRsaDltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlr >1a1j_A:beta-beta-alpha_zinc_fingers; title=RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE) organism=Mus musculus DNA sequence DG(B2):DC(C61) DC(B3):DG(C60) DG(B4):DC(C59) DT(B5):DA(C58) DG(B6):DC(C57) DG(B7):DC(C56) DG(B8):DC(C55) DC(B9):DG(C54) DG(B10):DC(C53) DT(B11):DA(C52) chainA ( 16) ARG118 0 0 0 0 0 0 0 4 0 0 ( 19) ASP121 0 0 0 0 0 0 1 7 0 0 ( 22) ARG124 0 0 0 0 0 10 11 6 0 0 ( 44) ARG146 0 0 0 0 14 14 5 0 0 0 ( 46) ASP148 0 0 0 0 0 1 9 3 0 0 ( 47) HIS149 0 0 0 30 12 0 0 0 0 0 ( 50) THR152 0 0 0 1 0 0 0 0 0 0 ( 72) ARG174 0 14 13 9 0 0 0 0 0 0 ( 74) ASP176 0 0 0 3 1 0 0 0 0 0 ( 75) GLU177 0 6 0 0 0 0 0 0 0 0 ( 78) ARG180 11 9 0 0 0 0 0 0 0 0 prot.sequence rpyacpvescdrrfsRsaDltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihl >1a1k_A:beta-beta-alpha_zinc_fingers; title=RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE) organism=Mus musculus DNA sequence DG(C52):DC(B11) DG(C53):DC(B10) DT(C54):DA(B9) DC(C55):DG(B8) DC(C56):DG(B7) DC(C57):DG(B6) DA(C58):DT(B5) DC(C59):DG(B4) DG(C60):DC(B3) DC(C61):DG(B2) chainA ( 16) ARG118 0 3 2 0 0 0 0 0 0 0 ( 19) ASP121 0 0 1 6 0 0 0 0 0 0 ( 22) ARG124 0 0 7 13 11 0 0 0 0 0 ( 44) ARG146 0 0 0 2 14 12 0 0 0 0 ( 45) SER147 0 0 1 0 0 0 0 0 0 0 ( 46) ASP148 0 0 10 7 1 0 0 0 0 0 ( 47) HIS149 0 0 0 0 0 12 27 0 0 0 ( 50) THR152 0 0 0 0 0 0 1 0 0 0 ( 72) ARG174 0 0 0 0 0 0 12 14 15 0 ( 74) ASP176 0 0 0 0 0 1 5 2 0 0 ( 75) GLU177 0 0 0 0 0 0 0 0 7 1 ( 78) ARG180 0 0 0 0 0 0 0 0 7 12 prot.sequence rpyacpvescdrrfsRsaDltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlr >1a1l_A:beta-beta-alpha_zinc_fingers; title=ZIF268 ZINC FINGER-DNA COMPLEX (GCAC SITE) organism=Mus musculus DNA sequence DG(C52):DC(B11) DT(C53):DA(B10) DG(C54):DC(B9) DC(C55):DG(B8) DC(C56):DG(B7) DC(C57):DG(B6) DA(C58):DT(B5) DC(C59):DG(B4) DG(C60):DC(B3) DC(C61):DG(B2) chainA ( 16) ARG118 0 0 2 0 0 0 0 0 0 0 ( 19) GLU121 0 0 4 2 0 0 0 0 0 0 ( 22) ARG124 0 0 6 11 9 0 0 0 0 0 ( 44) ARG146 0 0 0 2 12 13 0 0 0 0 ( 46) ASP148 0 0 3 6 2 0 0 0 0 0 ( 47) HIS149 0 0 0 0 0 12 28 0 0 0 ( 50) THR152 0 0 0 0 0 0 1 0 0 0 ( 72) ARG174 0 0 0 0 0 0 10 11 16 0 ( 74) ASP176 0 0 0 0 0 1 4 1 0 0 ( 75) GLU177 0 0 0 0 0 0 0 0 8 1 ( 78) ARG180 0 0 0 0 0 0 0 0 9 12 prot.sequence rpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlr >1a31_A:DNA_breaking-rejoining_enzymes;Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment; title=HUMAN RECONSTITUTED DNA TOPOISOMERASE I IN COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX organism=Homo sapiens DNA sequence DA(D101):DT(C22) DA(D102):5IU(C21) DA(D103):5IU(C20) DA(D104):5IU(C19) DA(D105):5IU(C18) DT(D106):DA(C17) 5IU(D107):DA(C16) 5IU(D108):DA(C15) 5IU(D109):DA(C14) 5IU(D110):DA(C13) DC(D111):DG(C12) DA(D112):DT(C11) DA(D113):5IU(C10) DA(D114):5IU(C9) DG(D115):DC(C8) DT(D116):DA(C7) DC(D117):DG(C6) DT(D118):DA(C5) DT(D119):DA(C4) DT(D120):DA(C3) DT(D121):DA(C2) DT(D122):DA(C1) chainA (150) ARG364 0 0 0 0 0 0 0 0 0 0 6 1 3 0 0 0 0 0 0 0 0 0 (212) TYR426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 (214) MET428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (277) ASN491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (318) LYS532 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 (415) ASN722 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence ikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkerianfkieppglfrgRgnhpkmgmlkrrimpediiincskdakvpspppghkwkevrhdnkvtwlvswteniqgsiKYiMlnpssrikgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNekeegetadtvgccslrvehinlhpeldgqeyvvefdflgKdsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynranravklNldpritvawckkwgvpiekiynktqrekfawaidmadedyef >1a35_A:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes; title=HUMAN TOPOISOMERASE I/DNA COMPLEX organism=Homo sapiens DNA sequence DA(D101):DT(C22) DA(D102):DT(C21) DA(D103):DT(C20) DA(D104):BRU(C19) DA(D105):BRU(C18) DT(D106):DA(C17) BRU(D107):DA(C16) BRU(D108):DA(C15) BRU(D109):DA(C14) BRU(D110):DA(C13) DC(D111):DG(C12) BRU(D112):DA(C11) DA(D113):DT(C10) DA(D114):DT(C9) DG(D115):DC(C8) DT(D116):DA(C7) DC(D117):DG(C6) DT(D118):DA(C5) DT(D119):DA(C4) DT(D120):DA(C3) BRU(D121):DA(C2) DT(D122):DA(C1) chainA (138) ASN352 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (150) ARG364 0 0 0 0 0 0 0 0 0 0 9 3 1 0 0 0 0 0 0 0 0 0 (212) TYR426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 (214) MET428 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (277) ASN491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (279) LYS493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (318) LYS532 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 (427) THR718 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (431) ASN722 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence ikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkerianfkieppglfrgRgnhpkmgmlkrrimpediiincskdakvpspppghkwkevrhdnkvtwlvswteniqgsiKYiMlnpssrikgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNeKeegetadtvgccslrvehinlhpeldgqeyvvefdflgKDsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltaKvfrtynasitlqqqlkeltapdenipakilsynranravailcnhqraqialgTsklNfldpritvawckkwgvpiekiynktqrekfawaidmadedyef >1a36_A:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes;Eukaryotic_DNA_topoisomerase_I,_dispensable_insert_domain; title=TOPOISOMERASE I/DNA COMPLEX organism=Homo sapiens DNA sequence DA(B1):DT(C122) DA(B2):DT(C121) DA(B3):DT(C120) DA(B4):DT(C119) DA(B5):DT(C118) DG(B6):DC(C117) DA(B7):DT(C116) DC(B8):DG(C115) DT(B9):DA(C114) DT(B10):DA(C113) DA(B11):DT(C112) DG(B12):DC(C111) DA(B13):DT(C110) DA(B14):DT(C109) DA(B15):DT(C108) DA(B16):DT(C107) DA(B17):DT(C106) DT(B18):DA(C105) DT(B19):DA(C104) DT(B20):DA(C103) DT(B21):DA(C102) DT(B22):DA(C101) chainA (138) ASN352 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (150) ARG364 0 0 0 0 0 0 0 0 0 0 1 14 0 0 0 0 0 0 0 0 0 0 (212) TYR426 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) MET428 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) ASN491 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) LYS493 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) LYS532 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 (497) THR718 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 (501) ASN722 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (524) ASN745 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence ikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkeriaNfkieppglfrgRgnhpkmgmlkrrimpediiincskdakvpspppghkwkevrhdnkvtwlvswteniqgsikYiMlnpssrikgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNeKeegetadtvgccslrvehinlhpeldgqeyvvefdflgKdsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynranravailcnhqeksmmnlqtkidakkeqladarrdlksakadakvmkdaktkkvveskkkavqrleeqlmklevqatdreenkqialgTsklNfldpritvawckkwgvpiekiyNktqrekfawaidmadedyef >1a3q_A:p53-like_transcription_factors;E_set_domains; title=HUMAN NF-KAPPA-B P52 BOUND TO DNA organism=Homo sapiens DNA sequence DG(D605):DC(C515) DG(D606):DC(C514) DG(D607):DC(C513) DG(D608):DC(C512) DA(D609):DT(C511) DT(D610):DA(C510) DT(D611):DA(C509) DC(D612):DG(C508) DC(D613):DG(C507) DC(D614):DG(C506) DC(D615):DG(C505) chainA ( 16) ARG52 0 8 10 7 0 0 0 0 0 0 0 ( 18) ARG54 5 10 1 0 0 0 0 0 0 0 0 ( 19) TYR55 0 0 0 2 8 0 0 0 0 0 0 ( 21) CYS57 0 0 0 1 0 0 0 0 0 0 0 ( 22) GLU58 0 2 6 8 0 0 0 0 0 0 0 ( 26) HIS62 12 4 0 0 0 0 0 0 0 0 0 (179) LYS221 0 0 0 8 2 0 0 0 0 0 0 prot.sequence gpylviveqpkqrgfRfRYgCEgpsHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrslplkpvisqpihdsKspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyyp >1a3q_AB:p53-like_transcription_factors;E_set_domains; title=HUMAN NF-KAPPA-B P52 BOUND TO DNA organism=Homo sapiens DNA sequence DG(C505):DC(D615) DG(C506):DC(D614) DG(C507):DC(D613) DG(C508):DC(D612) DA(C509):DT(D611) DA(C510):DT(D610) DT(C511):DA(D609) DC(C512):DG(D608) DC(C513):DG(D607) DC(C514):DG(D606) DC(C515):DG(D605) chainA ( 16) ARG52 0 0 0 0 0 0 0 7 10 8 0 ( 18) ARG54 0 0 0 0 0 0 0 0 1 10 5 ( 19) TYR55 0 0 0 0 0 0 8 2 0 0 0 ( 21) CYS57 0 0 0 0 0 0 0 1 0 0 0 ( 22) GLU58 0 0 0 0 0 0 0 8 6 2 0 ( 26) HIS62 0 0 0 0 0 0 0 0 0 4 12 (179) LYS221 0 0 0 0 0 0 2 8 0 0 0 chainB ( 16) ARG52 0 8 6 4 0 0 0 0 0 0 0 ( 18) ARG54 3 10 1 0 0 0 0 0 0 0 0 ( 19) TYR55 0 0 0 1 9 0 0 0 0 0 0 ( 21) CYS57 0 0 0 1 0 0 0 0 0 0 0 ( 22) GLU58 0 1 9 10 0 0 0 0 0 0 0 ( 26) HIS62 4 4 0 0 0 0 0 0 0 0 0 (179) LYS221 0 0 1 7 5 0 0 0 0 0 0 (210) LYS252 0 0 0 0 0 1 0 0 0 0 0 prot.sequence gpylviveqpkqrgfRfRYgCEgpsHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrslplkpvisqpihdsKspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyyp/gpylviveqpkqrgfRfRYgCEgpsHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrslplkpvisqpihdsKspgasnlkisrmdktagsvrggdevyllcdKvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyyp >1a66_A:p53-like_transcription_factors; title=SOLUTION NMR STRUCTURE OF THE CORE NFATC1/DNA COMPLEX, 18 STRUCTURES organism=HOMO SAPIENS DNA sequence DC(B315):DG(C351) DG(B316):DC(C350) DA(B317):DT(C349) DG(B318):DC(C348) DG(B319):DC(C347) DA(B320):DT(C346) DA(B321):DT(C345) DA(B322):DT(C344) DA(B323):DT(C343) DT(B324):DA(C342) DT(B325):DA(C341) DG(B326):DC(C340) chainA ( 26) ARG26 0 0 0 21 12 2 0 0 0 0 0 0 ( 28) ARG28 0 0 12 13 0 0 0 0 0 0 0 0 ( 29) TYR29 0 0 0 0 0 6 5 0 0 0 0 0 ( 32) GLU32 0 0 0 1 8 1 0 0 0 0 0 0 ( 35) ARG35 0 14 16 1 0 0 0 0 0 0 0 0 (125) LYS125 0 0 0 0 0 0 1 0 0 0 0 0 (142) ARG142 0 0 0 0 0 0 0 0 2 1 0 0 (176) GLN176 0 0 0 0 4 14 2 0 0 0 0 0 (177) ARG177 0 0 0 0 0 0 0 0 6 0 0 0 prot.sequence mkdwqlpshsgpyelrievqpkshhRaRYetEgsRgavkasagghpivqlhgyleneplmlqlfigtaddrllrphafyqvhritgktvsttsheailsntkvleipllpensmravidcagilKlrnsdielrkgetdigRkntrvrlvfrvhvpqpsgrtlslqvasnpiecsQRs >1a6y_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=REVERBA ORPHAN NUCLEAR RECEPTOR/DNA COMPLEX organism=Homo sapiens DNA sequence DC(D621):DG(C619) DT(D622):DA(C618) DG(D623):DC(C617) DA(D624):DT(C616) DC(D625):DG(C615) DC(D626):DG(C614) DT(D627):DA(C613) DA(D628):5IU(C612) DG(D629):DC(C611) DT(D630):DA(C610) DG(D631):DC(C609) DA(D632):DT(C608) DC(D633):DG(C607) DC(D634):DG(C606) DT(D635):DA(C605) DA(D636):DT(C604) DG(D637):DC(C603) DT(D638):DA(C602) DT(D639):DA(C601) DG(D640):DC(C600) chainA ( 14) HIS112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 21) GLU119 0 0 0 0 0 0 0 0 0 0 0 6 10 1 0 0 0 0 0 0 ( 24) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 1 6 9 0 0 0 0 0 ( 28) ARG126 0 0 0 0 0 0 0 0 0 0 0 5 16 8 0 0 0 0 0 0 ( 29) ARG127 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 ( 76) PHE173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 prot.sequence llckvcgdvasgfHygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrFgr >1a6y_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=REVERBA ORPHAN NUCLEAR RECEPTOR/DNA COMPLEX organism=Homo sapiens DNA sequence DC(D621):DG(C619) DT(D622):DA(C618) DG(D623):DC(C617) DA(D624):DT(C616) DC(D625):DG(C615) DC(D626):DG(C614) DT(D627):DA(C613) DA(D628):5IU(C612) DG(D629):DC(C611) DT(D630):DA(C610) DG(D631):DC(C609) DA(D632):DT(C608) DC(D633):DG(C607) DC(D634):DG(C606) DT(D635):DA(C605) DA(D636):DT(C604) DG(D637):DC(C603) DT(D638):DA(C602) DT(D639):DA(C601) DG(D640):DC(C600) chainA ( 14) HIS112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 21) GLU119 0 0 0 0 0 0 0 0 0 0 0 6 10 1 0 0 0 0 0 0 ( 24) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 1 6 9 0 0 0 0 0 ( 28) ARG126 0 0 0 0 0 0 0 0 0 0 0 5 16 8 0 0 0 0 0 0 ( 29) ARG127 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 ( 76) PHE173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 chainB ( 24) GLU119 0 0 0 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS122 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG126 0 0 0 2 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG127 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) PHE173 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG175 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 prot.sequence llckvcgdvasgfHygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrFgr/gmvllckvcgdvasgfhygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrfgRipk >1a73_A:His-Me_finger_endonucleases; title=INTRON-ENCODED ENDONUCLEASE I-PPOI COMPLEXED WITH DNA organism=Physarum polycephalum DNA sequence DT(E2):DA(D21) DG(E3):DC(D20) DA(E4):DT(D19) DC(E5):DG(D18) DT(E6):DA(D17) DC(E7):DG(D16) DT(E8):DA(D15) DC(E9):DG(D14) DT(E10):DA(C13) DT(E11):DA(C12) DA(E12):DT(C11) DA(E13):DT(C10) DG(F14):DC(C9) DA(F15):DT(C8) DG(F16):DC(C7) DA(F17):DT(C6) DG(F18):DC(C5) DT(F19):DA(C4) DC(F20):DG(C3) DA(F21):DT(C2) chainA ( 54) ALA55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 56) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 4 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 ( 64) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 5 ( 66) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 71) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 10 0 0 0 (115) LEU116 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 0 1 6 3 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >1a73_AB:His-Me_finger_endonucleases; title=INTRON-ENCODED ENDONUCLEASE I-PPOI COMPLEXED WITH DNA organism=Physarum polycephalum DNA sequence DT(C2):DA(F21) DG(C3):DC(F20) DA(C4):DT(F19) DC(C5):DG(F18) DT(C6):DA(F17) DC(C7):DG(F16) DT(C8):DA(F15) DC(C9):DG(F14) DT(C10):DA(E13) DT(C11):DA(E12) DA(C12):DT(E11) DA(C13):DT(E10) DG(D14):DC(E9) DA(D15):DT(E8) DG(D16):DC(E7) DA(D17):DT(E6) DG(D18):DC(E5) DT(D19):DA(E4) DC(D20):DG(E3) DA(D21):DT(E2) chainA ( 54) ALA55 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN57 0 0 0 0 4 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS65 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR67 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL72 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 10 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) LEU116 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 chainB ( 54) ALA55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 56) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 6 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 7 13 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 ( 64) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 6 ( 66) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 11 0 0 0 (115) LEU116 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv/altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvvhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >1a74_AB:His-Me_finger_endonucleases; title=I-PPOL HOMING ENDONUCLEASE/DNA COMPLEX organism=Physarum polycephalum DNA sequence DT(C402):DA(D421) DG(C403):DC(D420) DA(C404):DT(D419) DC(C405):DG(D418) DT(C406):DA(D417) DC(C407):DG(D416) DT(C408):DA(D415) DC(C409):DG(D414) DT(C410):DA(D413) DT(C411):DA(D412) DA(C412):DT(D411) DA(C413):DT(D410) DG(C414):DC(D409) DA(C415):DT(D408) DG(C416):DC(D407) DA(C417):DT(D406) DG(C418):DC(D405) DT(C419):DA(D404) DC(C420):DG(D403) DA(C421):DT(D402) chainA ( 54) ALA55 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN57 0 0 0 0 4 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 10 13 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS65 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR67 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL72 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 8 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) LEU116 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 chainB ( 54) ALA55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 56) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 6 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 ( 64) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 7 ( 66) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 8 0 0 0 (115) LEU116 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv/altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvvhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >1a74_B:His-Me_finger_endonucleases; title=I-PPOL HOMING ENDONUCLEASE/DNA COMPLEX organism=Physarum polycephalum DNA sequence DT(D402):DA(C421) DG(D403):DC(C420) DA(D404):DT(C419) DC(D405):DG(C418) DT(D406):DA(C417) DC(D407):DG(C416) DT(D408):DA(C415) DC(D409):DG(C414) DT(D410):DA(C413) DT(D411):DA(C412) DA(D412):DT(C411) DA(D413):DT(C410) DG(D414):DC(C409) DA(D415):DT(C408) DG(D416):DC(C407) DA(D417):DT(C406) DG(D418):DC(C405) DT(D419):DA(C404) DC(D420):DG(C403) DA(D421):DT(C402) chainB ( 54) ALA55 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN57 0 0 0 0 6 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS65 7 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR67 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) LEU116 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvvhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >1aay_A:beta-beta-alpha_zinc_fingers; title=ZIF268 ZINC FINGER-DNA COMPLEX organism=Mus musculus DNA sequence DA(C52):DT(B11) DC(C53):DG(B10) DG(C54):DC(B9) DC(C55):DG(B8) DC(C56):DG(B7) DC(C57):DG(B6) DA(C58):DT(B5) DC(C59):DG(B4) DG(C60):DC(B3) DC(C61):DG(B2) chainA ( 16) ARG118 9 12 13 0 0 0 0 0 0 0 ( 18) ASP120 6 1 1 0 0 0 0 0 0 0 ( 19) GLU121 0 0 4 2 0 0 0 0 0 0 ( 22) ARG124 0 0 5 12 8 0 0 0 0 0 ( 44) ARG146 0 0 0 2 14 14 0 0 0 0 ( 46) ASP148 0 0 3 7 2 0 0 0 0 0 ( 47) HIS149 0 0 0 0 0 12 26 0 0 0 ( 50) THR152 0 0 0 0 0 0 1 0 0 0 ( 72) ARG174 0 0 0 0 0 0 11 12 13 0 ( 74) ASP176 0 0 0 0 0 1 7 1 0 0 ( 75) GLU177 0 0 0 0 0 0 0 0 5 1 ( 78) ARG180 0 0 0 0 0 0 0 0 4 12 prot.sequence rpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlr >1ahd_P:Homeodomain-like; title=DETERMINATION OF THE NMR SOLUTION STRUCTURE OF AN ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX organism=DROSOPHILA SUBOBSCURA DNA sequence DC(B15):DG(A14) DT(B16):DA(A13) DC(B17):DG(A12) DT(B18):DA(A11) DA(B19):DT(A10) DA(B20):DT(A9) DT(B21):DA(A8) DG(B22):DC(A7) DG(B23):DC(A6) DC(B24):DG(A5) DT(B25):DA(A4) DT(B26):DA(A3) DT(B27):DA(A2) DC(B28):DG(A1) chainP ( 4) ARG3 0 5 11 3 0 0 0 0 0 0 0 0 0 0 ( 29) ARG28 0 0 0 0 0 0 0 0 0 0 0 6 1 0 ( 47) LYS46 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 48) ILE47 0 0 0 0 0 5 1 0 0 0 0 0 0 0 ( 51) GLN50 0 0 0 0 0 1 5 10 2 0 0 0 0 0 ( 52) ASN51 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 55) MET54 0 0 0 0 0 0 0 6 0 0 0 0 0 0 prot.sequence mrkRgrqtytryqtlelekefhfnryltRrrrieiahalslterqiKIwfQNrrMkwkkenktkgepg >1ais_A:TATA-box_binding_protein-like; title=TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI organism=PYROCOCCUS WOESEI DNA sequence DA(C1401):DT(E1434) DA(C1402):DT(E1433) DC(C1403):DG(E1432) DT(C1404):DA(E1431) DT(C1405):DA(E1430) DA(C1406):DT(E1429) DC(C1407):DG(E1428) DT(C1408):DA(E1427) DT(C1409):DA(E1426) DT(C1410):DA(E1425) 5IU(C1411):DA(E1424) 5IU(C1412):DA(E1423) DA(C1413):DT(E1422) DA(C1414):DT(E1421) DA(C1415):DT(E1420) DG(C1416):DC(E1419) DC(C1417):DG(E1418) chainA ( 13) ASN13 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 ( 15) VAL15 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 ( 43) PHE43 0 0 0 0 0 0 0 0 0 0 0 0 0 16 2 0 0 ( 44) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 ( 58) LEU58 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 ( 60) PHE60 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 66) VAL66 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 ( 68) THR68 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 (104) ASN104 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 (106) VAL106 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 (134) PHE134 0 0 0 0 0 0 0 9 15 0 0 0 0 0 0 0 0 (135) PRO135 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (149) LEU149 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 (151) PHE151 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (157) VAL157 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 (159) SER159 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 prot.sequence mvdmskvklrieNiVasvdlfaqldlekvldlcpnskynpeeFPgiichlddpkvalLiFssgklVvTgaksvqdieravaklaqklksigvkfkrapqidvqnmVfsgdigrefnldvvaltlpnceyepeqFPgviyrvkepksviLlFssgkiVcSgakseadaweavrkllreldky >1ais_AB:TATA-box_binding_protein-like;Cyclin-like; title=TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI organism=PYROCOCCUS WOESEI DNA sequence DG(E1418):DC(C1417) DC(E1419):DG(C1416) DT(E1420):DA(C1415) DT(E1421):DA(C1414) DT(E1422):DA(C1413) DA(E1423):5IU(C1412) DA(E1424):5IU(C1411) DA(E1425):DT(C1410) DA(E1426):DT(C1409) DA(E1427):DT(C1408) DG(E1428):DC(C1407) DT(E1429):DA(C1406) DA(E1430):DT(C1405) DA(E1431):DT(C1404) DG(E1432):DC(C1403) DT(E1433):DA(C1402) DT(E1434):DA(C1401) chainA ( 13) ASN13 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 ( 15) VAL15 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 ( 43) PHE43 0 0 2 16 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PRO44 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) LEU58 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PHE60 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) VAL66 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR68 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 (104) ASN104 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 (106) VAL106 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 (134) PHE134 0 0 0 0 0 0 0 0 15 9 0 0 0 0 0 0 0 (135) PRO135 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (149) LEU149 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 (151) PHE151 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (157) VAL157 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 (159) SER159 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 chainB prot.sequence mvdmskvklrieNiVasvdlfaqldlekvldlcpnskynpeeFPgiichlddpkvalLiFssgklVvTgaksvqdieravaklaqklksigvkfkrapqidvqnmVfsgdigrefnldvvaltlpnceyepeqFPgviyrvkepksviLlFssgkiVcSgakseadaweavrkllreldky/nlafalseldriTaQlklprhveeeaarlyreavrkglirgrSIesvmaacvyaacrLlKvprtlDeIadiarvdkkeigrsyrfiarnlnltpkklfvkptdyvNkfadelglsekvrrraieildeaykrgLTsgkspaglvaaalYiAsllegEkRtqrevaevarvtevtvrnrykelveklkikvpia >1akh_A:Homeodomain-like; title=MAT A1/ALPHA2/DNA TERNARY COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(D24):DA(C21) DG(D25):DC(C20) DA(D26):DT(C19) DT(D27):DA(C18) DG(D28):DC(C17) DT(D29):DA(C16) DA(D30):DT(C15) DA(D31):DT(C14) DA(D32):DT(C13) DT(D33):DA(C12) DT(D34):DA(C11) DT(D35):DA(C10) DT(D36):DA(C9) DT(D37):DA(C8) DA(D38):DT(C7) DC(D39):DG(C6) DA(D40):DT(C5) DT(D41):DA(C4) DG(D42):DC(C3) chainA ( 39) ARG115 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 ( 40) VAL116 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ILE119 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ASN120 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) MET123 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG124 13 15 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ispqarafleevfrrkqslnskekeevakkcgitplqvRVwfINkrMRs >1akh_AB:Homeodomain-like; title=MAT A1/ALPHA2/DNA TERNARY COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(D24):DA(C21) DG(D25):DC(C20) DA(D26):DT(C19) DT(D27):DA(C18) DG(D28):DC(C17) DT(D29):DA(C16) DA(D30):DT(C15) DA(D31):DT(C14) DA(D32):DT(C13) DT(D33):DA(C12) DT(D34):DA(C11) DT(D35):DA(C10) DT(D36):DA(C9) DT(D37):DA(C8) DA(D38):DT(C7) DC(D39):DG(C6) DA(D40):DT(C5) DT(D41):DA(C4) DG(D42):DC(C3) chainA ( 39) ARG115 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 ( 40) VAL116 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ILE119 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ASN120 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) MET123 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG124 13 15 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 5) ARG132 0 0 0 0 0 0 0 0 0 0 0 0 2 13 8 1 0 0 0 ( 8) ARG135 0 0 0 0 0 0 0 0 0 1 7 7 2 0 0 0 0 0 0 ( 51) ASN178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 54) SER181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 ( 55) ASN182 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 2 0 0 0 ( 58) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 17 0 0 prot.sequence ispqarafleevfrrkqslnskekeevakkcgitplqvRVwfINkrMRs/tkpyRghRftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvSNrrRkektitiapeladllsgepl >1am9_A:HLH,_helix-loop-helix_DNA-binding_domain; title=HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER organism=Homo sapiens DNA sequence DA(F22):DT(G55) DG(F23):DC(G54) DA(F24):DT(G53) DT(F25):DA(G52) DC(F26):DG(G51) DA(F27):DT(G50) DC(F28):DG(G49) DC(F29):DG(G48) DC(F30):DG(G47) DC(F31):DG(G46) DA(F32):DT(G45) DC(F33):DG(G44) DT(F34):DA(G43) DG(F35):DC(G42) DC(F36):DG(G41) DA(F37):DT(G40) DA(F38):DT(G39) chainA ( 10) HIS328 0 0 1 7 14 10 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASN329 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 13) ILE331 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) GLU332 0 0 0 4 11 15 2 0 0 0 0 0 0 0 0 0 0 ( 17) TYR335 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG336 0 0 0 0 0 1 7 13 0 0 0 0 0 0 0 0 0 prot.sequence qsrgekrtaHNaIEkrYRssindkiielkdlvvgteaklnksavlrkaidyirflqhsnqklkqenlslrtavhkskslk >1am9_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER organism=Homo sapiens DNA sequence DA(F22):DT(G55) DG(F23):DC(G54) DA(F24):DT(G53) DT(F25):DA(G52) DC(F26):DG(G51) DA(F27):DT(G50) DC(F28):DG(G49) DC(F29):DG(G48) DC(F30):DG(G47) DC(F31):DG(G46) DA(F32):DT(G45) DC(F33):DG(G44) DT(F34):DA(G43) DG(F35):DC(G42) DC(F36):DG(G41) DA(F37):DT(G40) DA(F38):DT(G39) chainA ( 10) HIS328 0 0 1 7 14 10 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASN329 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 13) ILE331 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) GLU332 0 0 0 4 11 15 2 0 0 0 0 0 0 0 0 0 0 ( 17) TYR335 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG336 0 0 0 0 0 1 7 13 0 0 0 0 0 0 0 0 0 chainB ( 6) ARG325 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 ( 9) HIS328 0 0 0 0 0 0 0 0 0 2 10 11 4 0 0 0 0 ( 10) ASN329 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 12) ILE331 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 ( 13) GLU332 0 0 0 0 0 0 0 3 11 8 3 0 0 0 0 0 0 ( 16) TYR335 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 ( 17) ARG336 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 prot.sequence qsrgekrtaHNaIEkrYRssindkiielkdlvvgteaklnksavlrkaidyirflqhsnqklkqenlslrtavhkskslk/srgekRtaHNaIEkrYRssindkiielkdlvvgteaklnksavlrkaidyirflqhsnqklkqenlslrtavhks >1am9_CD:HLH,_helix-loop-helix_DNA-binding_domain; title=HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER organism=Homo sapiens DNA sequence DA(H60):DT(E17) DG(H61):DC(E16) DA(H62):DT(E15) DT(H63):DA(E14) DC(H64):DG(E13) DA(H65):DT(E12) DC(H66):DG(E11) DC(H67):DG(E10) DC(H68):DG(E9) DC(H69):DG(E8) DA(H70):DT(E7) DC(H71):DG(E6) DT(H72):DA(E5) DG(H73):DC(E4) DC(H74):DG(E3) DA(H75):DT(E2) DA(H76):DT(E1) chainC ( 10) HIS328 0 0 0 7 16 8 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASN329 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 13) ILE331 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) GLU332 0 0 0 4 11 14 2 0 0 0 0 0 0 0 0 0 0 ( 17) TYR335 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG336 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 chainD ( 7) ARG325 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 ( 10) HIS328 0 0 0 0 0 0 0 0 0 2 11 11 4 0 0 0 0 ( 11) ASN329 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 13) ILE331 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 ( 14) GLU332 0 0 0 0 0 0 0 2 11 8 3 0 0 0 0 0 0 ( 17) TYR335 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 ( 18) ARG336 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 prot.sequence qsrgekrtaHNaIEkrYRssindkiielkdlvvgteaklnksavlrkaidyirflqhsnqklkqenlslrtavhkskslkdl/qsrgekRtaHNaIEkrYRssindkiielkdlvvgteaklnksavlrkaidyirflqhsnqklkqenlslrtavhks >1an2_A:HLH,_helix-loop-helix_DNA-binding_domain; title=RECOGNITION BY MAX OF ITS COGNATE DNA THROUGH A DIMERIC B/HLH/Z DOMAIN organism=Mus musculus DNA sequence DG(B1) DT(B2) DG(B3) DT(B4) DA(B5) DG(B6) DG(B7) DT(B8) DC(B9) DA(B10) DC(B11) DG(B12) DT(B13) DG(B14) DA(B15) DC(B16) DC(B17) DT(B18) DA(B19) DC(B20) DA(B21) DC(B22) chainA ( 7) HIS28 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 ( 8) ASN29 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 11) GLU32 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 ( 15) ARG36 0 0 0 0 0 0 0 0 0 0 11 8 1 0 0 0 0 0 0 0 0 0 prot.sequence adkrahHNalErkrRdhikdsfhslrdsvpslqgekasraqildkateyiqymrrknhthqqdiddlkrqnalleqqvralekars >1an4_A:HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURE AND FUNCTION OF THE B/HLH/Z DOMAIN OF USF organism=Homo sapiens DNA sequence DA(C302):DT(D342) DC(C303):DG(D341) DC(C304):DG(D340) DC(C305):DG(D339) DG(C306):DC(D338) DG(C307):DC(D337) DT(C308):DA(D336) DC(C309):DG(D335) DA(C310):DT(D334) DC(C311):DG(D333) DG(C312):DC(D332) DT(C313):DA(D331) DG(C314):DC(D330) DG(C315):DC(D329) DC(C316):DG(D328) DC(C317):DG(D327) DT(C318):DA(D326) DA(C319):DT(D325) DC(C320):DG(D324) DA(C321):DT(D323) chainA ( 8) GLN203 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) VAL207 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) GLU208 0 0 0 0 0 0 8 9 5 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG211 0 0 0 0 0 0 3 14 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG212 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 ( 43) GLN238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mdekrraQhneVErrRRdkinnwivqlskiipdssmestksgQskggilskasdyiqelrqsnhr >1an4_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURE AND FUNCTION OF THE B/HLH/Z DOMAIN OF USF organism=Homo sapiens DNA sequence DA(C302):DT(D342) DC(C303):DG(D341) DC(C304):DG(D340) DC(C305):DG(D339) DG(C306):DC(D338) DG(C307):DC(D337) DT(C308):DA(D336) DC(C309):DG(D335) DA(C310):DT(D334) DC(C311):DG(D333) DG(C312):DC(D332) DT(C313):DA(D331) DG(C314):DC(D330) DG(C315):DC(D329) DC(C316):DG(D328) DC(C317):DG(D327) DT(C318):DA(D326) DA(C319):DT(D325) DC(C320):DG(D324) DA(C321):DT(D323) chainA ( 8) GLN203 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) VAL207 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) GLU208 0 0 0 0 0 0 8 9 5 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG211 0 0 0 0 0 0 3 14 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG212 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 ( 43) GLN238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB ( 5) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 0 0 ( 9) HIS204 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 ( 13) GLU208 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 ( 16) ARG211 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 17) ARG212 0 0 0 0 0 0 0 0 0 3 7 3 0 0 0 0 0 0 0 0 prot.sequence mdekrraQhneVErrRRdkinnwivqlskiipdssmestksgQskggilskasdyiqelrqsnhr/mdekRraqHnevErrRRdkinnwivqlskiipdssmestksgqskggilskasdyiqelrqsnhr >1aoi_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=COMPLEX BETWEEN NUCLEOSOME CORE PARTICLE (H3,H4,H2A,H2B) AND 146 BP LONG DNA FRAGMENT organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 39) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 21) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 5) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/gkqggktrakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/kkrRKtrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/latkaarksapatggvkkphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/kkrrKtrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1aoi_D:Histone-fold; title=COMPLEX BETWEEN NUCLEOSOME CORE PARTICLE (H3,H4,H2A,H2B) AND 146 BP LONG DNA FRAGMENT organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainD ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkrRKtrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1apl_CD:Homeodomain-like; title=CRYSTAL STRUCTURE OF A MAT-ALPHA2 HOMEODOMAIN-OPERATOR COMPLEX SUGGESTS A GENERAL MODEL FOR HOMEODOMAIN-DNA INTERACTIONS organism=Saccharomyces cerevisiae DNA sequence DC(A2):DG(B42) DA(A3):DT(B41) DT(A4):DA(B40) DG(A5):DC(B39) DT(A6):DA(B38) DA(A7):DT(B37) DA(A8):DT(B36) DT(A9):DA(B35) DT(A10):DA(B34) DC(A11):DG(B33) DA(A12):DT(B32) DT(A13):DA(B31) DT(A14):DA(B30) DT(A15):DA(B29) DA(A16):DT(B28) DC(A17):DG(B27) DA(A18):DT(B26) DC(A19):DG(B25) DG(A20):DC(B24) DC(A21):DG(B23) chainC ( 1) TYR131 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 5) ARG135 0 0 0 0 0 0 0 0 0 0 6 8 2 0 0 0 0 0 0 0 ( 48) ASN178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 51) SER181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 52) ASN182 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 1 0 0 0 0 ( 55) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 12 0 0 0 chainD ( 4) ARG135 0 0 0 0 0 0 1 10 6 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN178 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER181 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN182 0 0 0 1 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG185 0 0 11 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence YrghRftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvSNrrRkekt/rghRftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvSNrrRkekt >1apl_D:Homeodomain-like; title=CRYSTAL STRUCTURE OF A MAT-ALPHA2 HOMEODOMAIN-OPERATOR COMPLEX SUGGESTS A GENERAL MODEL FOR HOMEODOMAIN-DNA INTERACTIONS organism=Saccharomyces cerevisiae DNA sequence DC(A2):DG(B42) DA(A3):DT(B41) DT(A4):DA(B40) DG(A5):DC(B39) DT(A6):DA(B38) DA(A7):DT(B37) DA(A8):DT(B36) DT(A9):DA(B35) DT(A10):DA(B34) DC(A11):DG(B33) DA(A12):DT(B32) DT(A13):DA(B31) DT(A14):DA(B30) DT(A15):DA(B29) DA(A16):DT(B28) DC(A17):DG(B27) DA(A18):DT(B26) DC(A19):DG(B25) DG(A20):DC(B24) DC(A21):DG(B23) chainD ( 4) ARG135 0 0 0 0 0 0 1 10 6 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN178 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER181 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN182 0 0 0 1 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG185 0 0 11 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rghRftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvSNrrRkekt >1au7_A:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=PIT-1 MUTANT/DNA COMPLEX organism=Rattus norvegicus DNA sequence DT(C449):DA(D498) DC(C450):DG(D497) DC(C451):DG(D496) DT(C452):DA(D495) DC(C453):DG(D494) DA(C454):DT(D493) DT(C455):DA(D492) DG(C456):DC(D491) DT(C457):DA(D490) DA(C458):DT(D489) DT(C459):DA(D488) DA(C460):DT(D487) DT(C461):DA(D486) DA(C462):DT(D485) DC(C463):DG(D484) DA(C464):DT(D483) DT(C465):DA(D482) DG(C466):DC(D481) DA(C467):DT(D480) DG(C468):DC(D479) DG(C469):DC(D478) DA(C470):DT(D477) DA(C471):DT(D476) DG(C472):DC(D475) chainA ( 39) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 40) GLN44 0 0 0 0 0 0 0 0 0 0 19 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR45 0 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 0 0 0 0 0 0 0 0 ( 44) CYS48 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 15 0 0 0 0 0 0 0 0 ( 51) LEU55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 55) ASN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 75) ARG105 0 0 0 0 0 0 0 10 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG146 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) VAL147 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) CYS150 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) ASN151 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) GLN154 0 0 0 0 6 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ARG155 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gmraleqfanefkvrriklgytqtnvgealaavhgsefSQTtiCRfenlqLsfkNacklkailskwleeaeqkrRttisiaakdalerhfgehskpssqeimrmaeelnlekevvRVwfCNrrQRekrvk >1au7_AB:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=PIT-1 MUTANT/DNA COMPLEX organism=Rattus norvegicus DNA sequence DT(C449):DA(D498) DC(C450):DG(D497) DC(C451):DG(D496) DT(C452):DA(D495) DC(C453):DG(D494) DA(C454):DT(D493) DT(C455):DA(D492) DG(C456):DC(D491) DT(C457):DA(D490) DA(C458):DT(D489) DT(C459):DA(D488) DA(C460):DT(D487) DT(C461):DA(D486) DA(C462):DT(D485) DC(C463):DG(D484) DA(C464):DT(D483) DT(C465):DA(D482) DG(C466):DC(D481) DA(C467):DT(D480) DG(C468):DC(D479) DG(C469):DC(D478) DA(C470):DT(D477) DA(C471):DT(D476) DG(C472):DC(D475) chainA ( 39) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 40) GLN44 0 0 0 0 0 0 0 0 0 0 19 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR45 0 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 0 0 0 0 0 0 0 0 ( 44) CYS48 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 15 0 0 0 0 0 0 0 0 ( 51) LEU55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 55) ASN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 75) ARG105 0 0 0 0 0 0 0 10 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG146 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) VAL147 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) CYS150 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) ASN151 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) GLN154 0 0 0 0 6 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ARG155 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) GLN27 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER43 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN44 0 0 0 0 0 0 0 0 0 0 10 17 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR45 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) CYS48 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG49 0 0 0 0 0 0 15 17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) LEU55 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 (114) ARG146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (115) VAL147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 (118) CYS150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (119) ASN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 (122) GLN154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 9 0 0 0 0 0 0 prot.sequence gmraleqfanefkvrriklgytqtnvgealaavhgsefSQTtiCRfenlqLsfkNacklkailskwleeaeqkrRttisiaakdalerhfgehskpssqeimrmaeelnlekevvRVwfCNrrQRekrvk/gmraleqfanefkvrriklgytQtnvgealaavhgsefSQTtiCRfenlqLsfknacklkailskwleeakrRttisiaakdalerhfgehskpssqeimrmaeelnlekevvRVwfCNrrQrekrvk >1awc_A:"Winged_helix"_DNA-binding_domain; title=MOUSE GABP ALPHA/BETA DOMAIN BOUND TO DNA organism=MUS MUSCULUS DNA sequence DT(E23):DA(D21) DC(E24):DG(D20) DC(E25):DG(D19) DG(E26):CBR(D18) DG(E27):DC(D17) BRU(E28):DA(D16) DG(E29):CBR(D15) BRU(E30):DA(D14) DA(E31):DT(D13) DC(E32):DG(D12) DT(E33):DA(D11) DT(E34):DA(D10) DC(E35):DG(D9) DC(E36):DG(D8) DG(E37):DC(D7) DG(E38):DC(D6) DT(E39):DA(D5) DC(E40):DG(D4) DA(E41):BRU(D3) DT(E42):DA(D2) chainA ( 54) LYS373 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 57) ARG376 0 0 0 0 0 0 0 0 0 0 1 9 19 21 0 0 0 0 0 0 ( 58) ALA377 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 60) ARG379 0 0 0 0 0 0 0 0 0 0 0 0 0 13 13 0 0 0 0 0 ( 61) TYR380 0 0 0 0 0 0 0 0 0 9 14 4 0 0 0 0 0 0 0 0 prot.sequence iqlwqfllelltdkdardciswvgdegefklnqpelvaqkwgqrknkptmnyeKlsRAlRYyydgdmickvqgkrfvykfvcdlktligysaaelnrlvieceqkklarm >1az0_A:Restriction_endonuclease-like; title=ECORV ENDONUCLEASE/DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DA(C902):DT(D811) DA(C903):DT(D810) DG(C904):DC(D809) DA(C905):DT(D808) DT(C906):DA(D807) DA(C907):DT(D806) DT(C908):DA(D805) DC(C909):DG(D804) DT(C910):DA(D803) DT(C911):DA(D802) chainA (103) LYS104 0 0 0 0 0 0 0 0 1 0 (105) THR106 0 0 0 0 0 0 9 0 0 0 (175) SER183 0 0 0 0 0 0 7 3 0 0 (177) ASN185 0 0 0 0 0 0 11 16 0 0 (178) THR186 0 0 0 0 5 4 8 0 0 0 (180) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqnhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1az0_AB:Restriction_endonuclease-like; title=ECORV ENDONUCLEASE/DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DA(D802):DT(C911) DA(D803):DT(C910) DG(D804):DC(C909) DA(D805):DT(C908) DT(D806):DA(C907) DA(D807):DT(C906) DT(D808):DA(C905) DC(D809):DG(C904) DT(D810):DA(C903) DT(D811):DA(C902) chainA (103) LYS104 0 1 0 0 0 0 0 0 0 0 (105) THR106 0 0 0 9 0 0 0 0 0 0 (175) SER183 0 0 3 7 0 0 0 0 0 0 (177) ASN185 0 0 16 11 0 0 0 0 0 0 (178) THR186 0 0 0 8 4 5 0 0 0 0 (180) ASN188 0 0 0 4 0 0 0 0 0 0 chainB ( 65) ASN70 0 0 4 4 0 0 0 0 0 0 ( 96) THR106 0 0 0 0 0 0 9 0 0 0 (167) SER183 0 0 0 0 0 0 7 4 0 0 (169) ASN185 0 0 0 0 0 0 11 18 0 0 (170) THR186 0 0 0 0 5 3 8 0 0 0 (172) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqnhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydedvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnikfTlggytsfirnntknivypfdqyiahwiigyvytrvslktynielneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1azp_A:Chromo_domain-like; title=HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DG(C109):DC(B108) DC(C110):DG(B107) DG(C111):DC(B106) DA(C112):DT(B105) DT(C113):DA(B104) DC(C114):DG(B103) DG(C115):DC(B102) DC(C116):DG(B101) chainA ( 8) TYR8 0 0 0 0 1 0 0 0 ( 24) TRP24 0 0 0 0 2 10 0 0 ( 26) VAL26 0 0 0 0 0 7 7 0 ( 29) MET29 0 0 0 0 0 13 12 0 ( 31) SER31 0 0 0 0 0 4 0 0 ( 42) ARG42 0 0 8 7 0 0 0 0 prot.sequence mvkvkfkYkgeekevdtskikkvWrVgkMvSftyddngktgRgavsekdapkelldmlaraerekk >1azq_A:Chromo_domain-like; title=HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DG(C109):DC(B108) DT(C110):DA(B107) DA(C111):DT(B106) DA(C112):DT(B105) DT(C113):DA(B104) DT(C114):DA(B103) DA(C115):DT(B102) DC(C116):DG(B101) chainA ( 24) TRP24 0 0 0 4 7 0 0 0 ( 26) VAL26 0 0 0 0 14 9 0 0 ( 29) MET29 0 0 0 0 7 15 0 0 ( 31) SER31 0 0 0 0 2 0 0 0 ( 42) ARG42 0 7 7 1 0 0 0 0 ( 44) ALA44 0 0 0 0 1 0 0 0 prot.sequence mvkvkfkYkgeekevdtskikkvWrVgkMvSftyddngktgRgAvsekdapkelldmlaraerekk >1b01_AB:Ribbon-helix-helix; title=TRANSCRIPTIONAL REPRESSOR COPG/DNA COMPLEX organism=Streptococcus agalactiae DNA sequence DA(F111):DT(E110) DG(F112):DC(E109) DT(F113):DA(E108) DG(F114):DC(E107) DC(F115):DG(E106) DA(F116):DT(E105) DC(F117):DG(E104) DG(F118):DC(E103) DG(F119):DC(E102) chainA ( 4) ARG4 0 0 15 8 13 3 0 0 0 ( 6) THR6 0 0 0 0 1 9 1 0 0 chainB ( 4) ARG4 0 0 0 0 0 5 9 15 0 ( 6) THR6 0 0 6 6 5 1 0 0 0 ( 8) THR8 0 6 3 0 0 0 0 0 0 prot.sequence mkkRlTitlsesvlenlekmaremglsksamisvalenykkgq/mkkRlTiTlsesvlenlekmaremglsksamisvalenykkgq >1b01_B:Ribbon-helix-helix; title=TRANSCRIPTIONAL REPRESSOR COPG/DNA COMPLEX organism=Streptococcus agalactiae DNA sequence DA(F111):DT(E110) DG(F112):DC(E109) DT(F113):DA(E108) DG(F114):DC(E107) DC(F115):DG(E106) DA(F116):DT(E105) DC(F117):DG(E104) DG(F118):DC(E103) DG(F119):DC(E102) chainB ( 4) ARG4 0 0 0 0 0 5 9 15 0 ( 6) THR6 0 0 6 6 5 1 0 0 0 ( 8) THR8 0 6 3 0 0 0 0 0 0 prot.sequence mkkRlTiTlsesvlenlekmaremglsksamisvalenykkgq >1b3t_A:Viral_DNA-binding_domain; title=EBNA-1 NUCLEAR PROTEIN/DNA COMPLEX organism=Human herpesvirus 4 DNA sequence DG(D201):DC(C118) DG(D202):DC(C117) DG(D203):DC(C116) DA(D204):DT(C115) DA(D205):DT(C114) DG(D206):DC(C113) DC(D207):DG(C112) DA(D208):DT(C111) DT(D209):DA(C110) DA(D210):DT(C109) DT(D211):DA(C108) DG(D212):DC(C107) DC(D213):DG(C106) DT(D214):DA(C105) DT(D215):DA(C104) DC(D216):DG(C103) DC(D217):DG(C102) DC(D218):DG(C101) chainA ( 1) LYS461 0 0 6 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TRP464 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 5) PHE465 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG469 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 15) ASN475 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS477 11 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) PHE478 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 55) THR515 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) TYR518 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN519 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG522 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KggWFgkhRgqggsNpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlp >1b3t_AB:Viral_DNA-binding_domain; title=EBNA-1 NUCLEAR PROTEIN/DNA COMPLEX organism=Human herpesvirus 4 DNA sequence DG(D201):DC(C118) DG(D202):DC(C117) DG(D203):DC(C116) DA(D204):DT(C115) DA(D205):DT(C114) DG(D206):DC(C113) DC(D207):DG(C112) DA(D208):DT(C111) DT(D209):DA(C110) DA(D210):DT(C109) DT(D211):DA(C108) DG(D212):DC(C107) DC(D213):DG(C106) DT(D214):DA(C105) DT(D215):DA(C104) DC(D216):DG(C103) DC(D217):DG(C102) DC(D218):DG(C101) chainA ( 1) LYS461 0 0 6 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TRP464 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 5) PHE465 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG469 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 15) ASN475 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS477 11 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) PHE478 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 55) THR515 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) TYR518 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN519 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG522 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 1) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 2 0 0 ( 4) TRP464 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 5) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 9) ARG469 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 17) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 7 ( 18) PHE478 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 55) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 58) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 ( 59) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 62) ARG522 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence KggWFgkhRgqggsNpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlp/KggWFgkhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlp >1b69_A:DNA-binding_domain; title=THE SOLUTION STRUCTURE OF TN916 INTEGRASE N-TERMINAL DOMAIN/DNA COMPLEX organism=ENTEROCOCCUS FAECALIS DNA sequence DG(C114):DC(B113) DA(C115):DT(B112) DA(C116):DT(B111) DT(C117):DA(B110) DT(C118):DA(B109) DT(C119):DA(B108) DA(C120):DT(B107) DC(C121):DG(B106) DT(C122):DA(B105) DA(C123):DT(B104) DC(C124):DG(B103) DT(C125):DA(B102) DC(C126):DG(B101) chainA ( 18) ARG20 0 0 0 0 0 0 10 9 0 0 0 0 0 ( 19) LYS21 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 22) ARG24 0 0 0 0 1 3 0 0 0 0 0 0 0 ( 24) LEU26 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 26) LYS28 0 0 0 0 0 0 0 0 6 5 9 0 0 ( 28) ILE30 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 34) PRO36 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 36) PHE38 0 0 0 0 0 0 0 23 9 1 0 0 0 ( 38) TYR40 0 0 0 0 0 1 14 2 0 0 0 0 0 prot.sequence ekrrdnrgrilktgesqRKdgRyLyKyIdsfgePqFvYswklvatdrvpagkrdaislrekiaelqkdi >1b72_A:Homeodomain-like; title=PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX organism=HOMO SAPIENS DNA sequence DC(D2):DG(E40) DT(D3):DA(E39) DC(D4):DG(E38) DT(D5):DA(E37) DA(D6):DT(E36) DT(D7):DA(E35) DG(D8):DC(E34) DA(D9):DT(E33) DT(D10):DA(E32) DT(D11):DA(E31) DG(D12):DC(E30) DA(D13):DT(E29) DT(D14):DA(E28) DC(D15):DG(E27) DG(D16):DC(E26) DG(D17):DC(E25) DC(D18):DG(E24) DT(D19):DA(E23) DG(D20):DC(E22) chainA ( 11) ARG207 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 ( 53) ILE249 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 ( 56) GLN252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 ( 57) ASN253 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 ( 60) MET256 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 prot.sequence artfdwmkvlRtnfttrqltelekefhfnkylsrarrveiaatlelnetqvkIwfQNrrMkqkkrere >1b72_AB:Homeodomain-like; title=PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX organism=HOMO SAPIENS DNA sequence DC(D2):DG(E40) DT(D3):DA(E39) DC(D4):DG(E38) DT(D5):DA(E37) DA(D6):DT(E36) DT(D7):DA(E35) DG(D8):DC(E34) DA(D9):DT(E33) DT(D10):DA(E32) DT(D11):DA(E31) DG(D12):DC(E30) DA(D13):DT(E29) DT(D14):DA(E28) DC(D15):DG(E27) DG(D16):DC(E26) DG(D17):DC(E25) DC(D18):DG(E24) DT(D19):DA(E23) DG(D20):DC(E22) chainA ( 11) ARG207 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 ( 53) ILE249 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 ( 56) GLN252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 ( 57) ASN253 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 ( 60) MET256 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 chainB ( 3) ARG237 0 0 0 1 9 6 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ASN282 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 52) ASN286 0 0 0 0 0 0 4 11 2 0 0 0 0 0 0 0 0 0 0 ( 55) ILE289 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 56) ARG290 0 0 0 0 0 21 11 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence artfdwmkvlRtnfttrqltelekefhfnkylsrarrveiaatlelnetqvkIwfQNrrMkqkkrere/rkRrnfnkqateilneyfyshlsnpypseeakeelakkcgitvsqvsNwfgNkrIRykknigkfqeeaniyaa >1b8i_A:Homeodomain-like; title=STRUCTURE OF THE HOMEOTIC UBX/EXD/DNA TERNARY COMPLEX organism=DROSOPHILA MELANOGASTER DNA sequence DC(C3):DG(D30) DG(C4):DC(D29) DC(C5):DG(D28) DC(C6):DG(D27) DA(C7):DT(D26) DT(C8):DA(D25) DA(C9):DT(D24) DA(C10):DT(D23) DA(C11):DT(D22) DT(C12):DA(D21) DC(C13):DG(D20) DA(C14):DT(D19) DC(C15):DG(D18) chainA ( 7) ARG105 0 0 0 0 0 0 6 11 7 0 0 0 0 ( 49) ILE147 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 52) GLN150 0 2 10 3 0 0 0 0 0 0 0 0 0 ( 53) ASN151 0 0 0 0 0 10 8 0 0 0 0 0 0 ( 56) MET154 0 0 0 4 0 0 0 0 0 0 0 0 0 prot.sequence fypwmaRqtytryqtlelekefhtnhyltrrrriemahalslterqikIwfQNrrMklkkei >1b8i_AB:Homeodomain-like; title=STRUCTURE OF THE HOMEOTIC UBX/EXD/DNA TERNARY COMPLEX organism=DROSOPHILA MELANOGASTER DNA sequence DC(C3):DG(D30) DG(C4):DC(D29) DC(C5):DG(D28) DC(C6):DG(D27) DA(C7):DT(D26) DT(C8):DA(D25) DA(C9):DT(D24) DA(C10):DT(D23) DA(C11):DT(D22) DT(C12):DA(D21) DC(C13):DG(D20) DA(C14):DT(D19) DC(C15):DG(D18) chainA ( 7) ARG105 0 0 0 0 0 0 6 11 7 0 0 0 0 ( 49) ILE147 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 52) GLN150 0 2 10 3 0 0 0 0 0 0 0 0 0 ( 53) ASN151 0 0 0 0 0 10 8 0 0 0 0 0 0 ( 56) MET154 0 0 0 4 0 0 0 0 0 0 0 0 0 chainB ( 1) ARG205 0 0 0 0 0 0 0 0 0 0 11 11 8 ( 46) ASN250 0 0 0 0 0 0 0 0 3 1 0 0 0 ( 50) ASN254 0 0 0 0 0 0 0 0 1 11 5 0 0 ( 54) ARG258 0 0 0 0 0 0 0 0 0 4 14 15 0 prot.sequence fypwmaRqtytryqtlelekefhtnhyltrrrriemahalslterqikIwfQNrrMklkkei/RrnfskqaseilneyfyshlsnpypseeakeelarkcgitvsqvsNwfgNkriRykkn >1b94_A:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE ECORV WITH CALCIUM organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) DT(D6):DA(C7) DA(D7):DT(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) DT(D11):DA(C2) chainA ( 69) ASN70 0 0 0 0 0 3 7 5 0 0 (103) LYS104 0 2 0 0 0 0 0 0 0 0 (105) THR106 0 0 0 9 0 0 0 0 0 0 (182) SER183 0 0 3 8 0 0 0 0 0 0 (184) ASN185 0 0 18 10 0 0 0 0 0 0 (185) THR186 0 0 0 8 3 5 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1b94_AB:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE ECORV WITH CALCIUM organism=Escherichia coli DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainA ( 69) ASN70 0 0 5 7 3 0 0 0 0 0 (103) LYS104 0 0 0 0 0 0 0 0 2 0 (105) THR106 0 0 0 0 0 0 9 0 0 0 (182) SER183 0 0 0 0 0 0 8 3 0 0 (184) ASN185 0 0 0 0 0 0 10 18 0 0 (185) THR186 0 0 0 0 5 3 8 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 chainB ( 37) LYS38 0 0 0 0 0 1 0 0 0 0 ( 69) ASN70 0 0 0 0 0 1 4 4 0 0 (103) LYS104 0 1 0 0 0 0 0 0 0 0 (105) THR106 0 0 0 8 0 0 0 0 0 0 (182) SER183 0 0 4 8 0 0 0 0 0 0 (184) ASN185 0 0 18 11 0 0 0 0 0 0 (185) THR186 0 0 0 9 3 5 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtKvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1b95_AB:Restriction_endonuclease-like; title=ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUP organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) DT(D6):DA(C7) DA(D7):DT(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) DT(D11):DA(C2) chainA ( 69) ASN70 0 0 0 0 0 3 7 6 0 0 (103) LYS104 0 1 0 0 0 0 0 0 0 0 (105) THR106 0 0 1 9 0 0 0 0 0 0 (182) SER183 0 0 5 8 0 0 0 0 0 0 (184) ASN185 0 0 18 10 0 0 0 0 0 0 (185) THR186 0 0 0 8 3 5 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 chainB ( 37) LYS38 0 0 0 0 1 0 0 0 0 0 ( 69) ASN70 0 0 3 3 0 0 0 0 0 0 (103) LYS104 0 0 0 0 0 0 0 0 1 0 (105) THR106 0 0 0 0 0 0 9 1 0 0 (182) SER183 0 0 0 0 0 0 7 4 0 0 (184) ASN185 0 0 0 0 0 0 12 18 0 0 (185) THR186 0 0 0 0 5 3 9 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtKvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1b95_B:Restriction_endonuclease-like; title=ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUP organism=Escherichia coli DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainB ( 37) LYS38 0 0 0 0 0 1 0 0 0 0 ( 69) ASN70 0 0 0 0 0 0 3 3 0 0 (103) LYS104 0 1 0 0 0 0 0 0 0 0 (105) THR106 0 0 1 9 0 0 0 0 0 0 (182) SER183 0 0 4 7 0 0 0 0 0 0 (184) ASN185 0 0 18 12 0 0 0 0 0 0 (185) THR186 0 0 0 9 3 5 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtKvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1b96_A:Restriction_endonuclease-like; title=ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUP organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) DT(D6):DA(C7) DA(D7):DT(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) DT(D11):DA(C2) chainA ( 69) ASN70 0 0 0 0 0 1 7 5 0 0 (103) LYS104 0 1 0 0 0 0 0 0 0 0 (105) THR106 0 0 1 11 0 0 0 0 0 0 (182) SER183 0 0 5 8 0 0 0 0 0 0 (184) ASN185 0 0 16 10 0 0 0 0 0 0 (185) THR186 0 0 0 8 3 6 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqeNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1b96_AB:Restriction_endonuclease-like; title=ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUP organism=Escherichia coli DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainA ( 69) ASN70 0 0 5 7 1 0 0 0 0 0 (103) LYS104 0 0 0 0 0 0 0 0 1 0 (105) THR106 0 0 0 0 0 0 11 1 0 0 (182) SER183 0 0 0 0 0 0 8 5 0 0 (184) ASN185 0 0 0 0 0 0 10 16 0 0 (185) THR186 0 0 0 0 6 3 8 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 chainB ( 69) ASN70 0 0 0 0 0 0 3 2 0 0 (103) LYS104 0 2 0 0 0 0 0 0 0 0 (105) THR106 0 0 0 8 0 0 0 0 0 0 (182) SER183 0 0 4 7 0 0 0 0 0 0 (184) ASN185 0 0 18 11 0 0 0 0 0 0 (185) THR186 0 0 0 8 4 6 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqeNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtKvlstifelfsrpiinkiaekhgyiveepkqeNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1b97_AB:Restriction_endonuclease-like; title=ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUP organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) DT(D6):DA(C7) DA(D7):DT(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) DT(D11):DA(C2) chainA ( 69) ASN70 0 0 0 0 0 4 3 1 0 0 (103) LYS104 0 1 0 0 0 0 0 0 0 0 (105) THR106 0 0 1 10 0 0 0 0 0 0 (182) SER183 0 0 4 7 0 0 0 0 0 0 (184) ASN185 0 0 16 10 0 0 0 0 0 0 (185) THR186 0 0 0 8 3 5 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 chainB ( 69) ASN70 0 0 3 2 0 0 0 0 0 0 (103) LYS104 0 0 0 0 0 0 0 0 2 0 (105) THR106 0 0 0 0 0 0 9 1 0 0 (182) SER183 0 0 0 0 0 0 7 2 0 0 (184) ASN185 0 0 0 0 0 0 10 16 0 0 (185) THR186 0 0 0 0 5 3 9 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqlNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqlNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1b97_B:Restriction_endonuclease-like; title=ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUP organism=Escherichia coli DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainB ( 69) ASN70 0 0 0 0 0 0 2 3 0 0 (103) LYS104 0 2 0 0 0 0 0 0 0 0 (105) THR106 0 0 1 9 0 0 0 0 0 0 (182) SER183 0 0 2 7 0 0 0 0 0 0 (184) ASN185 0 0 16 10 0 0 0 0 0 0 (185) THR186 0 0 0 9 3 5 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqlNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1bbx_C:Chromo_domain-like; title=NON-SPECIFIC PROTEIN-DNA INTERACTIONS IN THE SSO7D-DNA COMPLEX, NMR, 1 STRUCTURE organism=SULFOLOBUS SOLFATARICUS DNA sequence DC(B13):DG(A12) DT(B14):DA(A11) DA(B15):DT(A10) DG(B16):DC(A9) DC(B17):DG(A8) DG(B18):DC(A7) DC(B19):DG(A6) DG(B20):DC(A5) DC(B21):DG(A4) DT(B22):DA(A3) DA(B23):DT(A2) DG(B24):DC(A1) chainC ( 23) TRP23 0 0 0 0 0 0 0 1 4 0 0 0 ( 25) VAL25 0 0 0 0 0 0 6 9 0 0 0 0 ( 27) LYS27 0 0 0 0 0 0 6 9 0 0 0 0 ( 30) SER30 0 0 0 0 0 0 0 1 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 6 18 0 0 0 prot.sequence atvkfkykgeekqvdiskikkvWrVgKmiSftydegggktgRgavsekdapkellqmlekqkk >1bbx_CD:Chromo_domain-like; title=NON-SPECIFIC PROTEIN-DNA INTERACTIONS IN THE SSO7D-DNA COMPLEX, NMR, 1 STRUCTURE organism=SULFOLOBUS SOLFATARICUS DNA sequence DC(A1):DG(B24) DT(A2):DA(B23) DA(A3):DT(B22) DG(A4):DC(B21) DC(A5):DG(B20) DG(A6):DC(B19) DC(A7):DG(B18) DG(A8):DC(B17) DC(A9):DG(B16) DT(A10):DA(B15) DA(A11):DT(B14) DG(A12):DC(B13) chainC ( 23) TRP23 0 0 0 4 1 0 0 0 0 0 0 0 ( 25) VAL25 0 0 0 0 9 6 0 0 0 0 0 0 ( 27) LYS27 0 0 0 0 9 6 0 0 0 0 0 0 ( 30) SER30 0 0 0 0 1 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 18 6 0 0 0 0 0 0 0 chainD ( 23) TRP23 0 0 0 0 0 0 0 1 4 0 0 0 ( 25) VAL25 0 0 0 0 0 0 6 9 0 0 0 0 ( 27) LYS27 0 0 0 0 0 0 6 9 0 0 0 0 ( 30) SER30 0 0 0 0 0 0 0 1 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 6 18 0 0 0 prot.sequence atvkfkykgeekqvdiskikkvWrVgKmiSftydegggktgRgavsekdapkellqmlekqkk/atvkfkykgeekqvdiskikkvWrVgKmiSftydegggktgRgavsekdapkellqmlekqkk >1bc7_C:"Winged_helix"_DNA-binding_domain; title=SERUM RESPONSE FACTOR ACCESSORY PROTEIN 1A (SAP-1)/DNA COMPLEX organism=Homo sapiens DNA sequence DC(B12):DG(A11) DA(B13):DT(A10) DC(B14):DG(A9) DA(B15):DT(A8) DT(B16):DA(A7) DC(B17):DG(A6) DC(B18):DG(A5) DT(B19):DA(A4) DG(B20):DC(A3) DT(B21):DA(A2) DC(B22):DG(A1) chainC ( 58) LYS58 0 0 0 0 5 0 0 0 0 0 0 ( 61) ARG61 0 0 0 0 8 20 24 0 0 0 0 ( 64) ARG64 0 0 0 0 0 0 14 10 2 0 0 ( 65) TYR65 0 0 11 6 4 0 0 0 0 0 0 prot.sequence mdsaitlwqfllqllqkpqnkhmicwtsndgqfkllqaeevarlwgirknkpnmnydKlsRalRYyyvkniikkvngqkfvykfvsypeilnm >1bc8_C:"Winged_helix"_DNA-binding_domain; title=STRUCTURES OF SAP-1 BOUND TO DNA SEQUENCES FROM THE E74 AND C-FOS PROMOTERS PROVIDE INSIGHTS INTO HOW ETS PROTEINS DISCRIMINATE BETWEEN RELATED DNA TARGETS organism=Homo sapiens DNA sequence DA(B12):DT(A10) DC(B13):DG(A9) DT(B14):DA(A8) DT(B15):DA(A7) DC(B16):DG(A6) DC(B17):DG(A5) DG(B18):DC(A4) DG(B19):DC(A3) DT(B20):DA(A2) chainC ( 58) LYS58 0 0 0 5 0 0 0 0 0 ( 61) ARG61 0 0 1 8 17 24 0 0 0 ( 62) ALA62 0 0 1 0 0 0 0 0 0 ( 64) ARG64 0 0 0 0 0 13 17 0 0 ( 65) TYR65 0 5 10 6 1 0 0 0 0 prot.sequence mdsaitlwqfllqllqkpqnkhmicwtsndgqfkllqaeevarlwgirknkpnmnyDKlsRAlRYyyvkniikkvngqkfvykfvsypeilnm >1bdh_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX organism=Escherichia coli DNA sequence DT(B699) DA(B700) DC(B701) DG(B702) DC(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DG(B712) DC(B713) DG(B714) DT(B715) chainA ( 12) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 3 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 24 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 ( 53) ALA55 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLAvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1bdi_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX organism=ESCHERICHIA COLI DNA sequence DT(B699) DA(B700) DC(B701) DG(B702) DC(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DG(B712) DC(B713) DG(B714) DT(B715) chainA ( 12) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 23 11 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1bdt_ABCD:Ribbon-helix-helix; title=WILD TYPE GENE-REGULATING PROTEIN ARC/DNA COMPLEX organism=Enterobacteria phage P22 DNA sequence DA(F2):DT(E22) DT(F3):DA(E21) DG(F4):DC(E20) DA(F5):DT(E19) DT(F6):DA(E18) DA(F7):DT(E17) DG(F8):DC(E16) DA(F9):DT(E15) DA(F10):DT(E14) DG(F11):DC(E13) DC(F12):DG(E12) DA(F13):DT(E11) DC(F14):DG(E10) DT(F15):DA(E9) DC(F16):DG(E8) DT(F17):DA(E7) DA(F18):DT(E6) DC(F19):DG(E5) DT(F20):DA(E4) DA(F21):DT(E3) DT(F22):DA(E2) chainA ( 4) MET4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 ( 9) GLN9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 3 0 0 0 ( 11) ASN11 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 11 0 0 0 0 0 ( 13) ARG13 0 0 0 0 0 0 0 0 0 0 0 0 0 14 5 4 0 0 0 0 0 chainB ( 4) MET4 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 5) SER5 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 9) GLN9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 14 0 0 0 0 ( 11) ASN11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 ( 13) ARG13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 9 0 chainC ( 4) MET4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) SER5 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) GLN9 0 0 0 3 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASN11 0 0 0 0 0 9 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ARG13 0 0 0 0 0 4 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) MET4 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) SER5 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 ( 9) GLN9 0 0 0 0 16 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASN11 0 0 0 1 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ARG13 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkgMskmpQfNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegrig/mkgMSkmpQfNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegriga/mkgMSkmpQfNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegr/mkgMSkmpQfNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegr >1bdt_C:Ribbon-helix-helix; title=WILD TYPE GENE-REGULATING PROTEIN ARC/DNA COMPLEX organism=Enterobacteria phage P22 DNA sequence DA(E2):DT(F22) DT(E3):DA(F21) DA(E4):DT(F20) DG(E5):DC(F19) DT(E6):DA(F18) DA(E7):DT(F17) DG(E8):DC(F16) DA(E9):DT(F15) DG(E10):DC(F14) DT(E11):DA(F13) DG(E12):DC(F12) DC(E13):DG(F11) DT(E14):DA(F10) DT(E15):DA(F9) DC(E16):DG(F8) DT(E17):DA(F7) DA(E18):DT(F6) DT(E19):DA(F5) DC(E20):DG(F4) DA(E21):DT(F3) DT(E22):DA(F2) chainC ( 4) MET4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 ( 5) SER5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 ( 9) GLN9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 3 0 0 0 ( 11) ASN11 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 9 0 0 0 0 0 ( 13) ARG13 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 4 0 0 0 0 0 prot.sequence mkgMSkmpQfNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegr >1bdv_ABCD:Ribbon-helix-helix; title=ARC FV10 COCRYSTAL organism=Enterobacteria phage P22 DNA sequence DA(E2):DT(F22) DT(E3):DA(F21) DA(E4):DT(F20) DG(E5):DC(F19) DT(E6):DA(F18) DA(E7):DT(F17) DG(E8):DC(F16) DA(E9):DT(F15) DG(E10):DC(F14) DT(E11):DA(F13) DG(E12):DC(F12) DC(E13):DG(F11) DT(E14):DA(F10) DT(E15):DA(F9) DC(E16):DG(F8) DT(E17):DA(F7) DA(E18):DT(F6) DT(E19):DA(F5) DC(E20):DG(F4) DA(E21):DT(F3) DT(E22):DA(F2) chainA ( 3) GLN9 0 0 0 3 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ASN11 0 0 0 0 2 12 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG13 0 0 0 0 0 6 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 4) MET4 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) SER5 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 9) GLN9 0 0 0 0 14 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASN11 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ARG13 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 3) GLN9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 ( 5) ASN11 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 12 0 0 0 0 0 ( 7) ARG13 0 0 0 0 0 0 0 0 0 0 0 0 1 8 4 4 0 0 0 0 0 chainD ( 4) MET4 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 5) SER5 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 9) GLN9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 0 0 0 0 ( 11) ASN11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 1 0 0 0 ( 13) ARG13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 5 0 prot.sequence mpQvNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegrig/mkgMSkmpQvNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegriga/mpQvNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkeg/mkgMSkmpQvNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegr >1bdv_D:Ribbon-helix-helix; title=ARC FV10 COCRYSTAL organism=Enterobacteria phage P22 DNA sequence DA(F2):DT(E22) DT(F3):DA(E21) DG(F4):DC(E20) DA(F5):DT(E19) DT(F6):DA(E18) DA(F7):DT(E17) DG(F8):DC(E16) DA(F9):DT(E15) DA(F10):DT(E14) DG(F11):DC(E13) DC(F12):DG(E12) DA(F13):DT(E11) DC(F14):DG(E10) DT(F15):DA(E9) DC(F16):DG(E8) DT(F17):DA(E7) DA(F18):DT(E6) DC(F19):DG(E5) DT(F20):DA(E4) DA(F21):DT(E3) DT(F22):DA(E2) chainD ( 4) MET4 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) SER5 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 ( 9) GLN9 0 0 0 0 13 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASN11 0 0 0 1 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ARG13 0 5 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkgMSkmpQvNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegr >1bf4_A:Chromo_domain-like; title=CHROMOSOMAL DNA-BINDING PROTEIN SSO7D/D(GCGAACGC) COMPLEX organism=Sulfolobus acidocaldarius DNA sequence DG(B101):DC(C116) DC(B102):DG(C115) DG(B103):DC(C114) DT(B104):DA(C113) 5IU(B105):DA(C112) DC(B106):DG(C111) DG(B107):DC(C110) DC(B108):DG(C109) chainA ( 7) TYR8 0 0 0 1 0 0 0 0 ( 23) TRP24 0 0 12 4 0 0 0 0 ( 25) VAL26 0 6 9 0 0 0 0 0 ( 28) MET29 0 19 11 0 0 0 0 0 ( 30) SER31 0 0 4 0 0 0 0 0 ( 42) ARG43 0 0 0 0 9 8 0 0 ( 44) ALA45 0 0 1 0 0 0 0 0 prot.sequence atvkfkYKgeekevdiskikkvWrVgkMiSftydegggktgRgAvsekdapkellqmlekqkk >1bf5_A:p53-like_transcription_factors;SH2_domain;STAT; title=TYROSINE PHOSPHORYLATED STAT-1/DNA COMPLEX organism=HOMO SAPIENS DNA sequence DC(B1002):DG(C2018) DA(B1003):DT(C2017) DG(B1004):DC(C2016) DT(B1005):DA(C2015) DT(B1006):DA(C2014) DT(B1007):DA(C2013) DC(B1008):DG(C2012) DC(B1009):DG(C2011) DC(B1010):DG(C2010) DG(B1011):DC(C2009) DT(B1012):DA(C2008) DA(B1013):DT(C2007) DA(B1014):DT(C2006) DA(B1015):DT(C2005) DT(B1016):DA(C2004) DG(B1017):DC(C2003) DC(B1018):DG(C2002) chainA (187) LYS336 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 (272) GLU421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 23 (310) SER459 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 (311) ASN460 0 0 0 0 0 0 0 0 0 7 14 9 1 0 0 0 0 (312) VAL461 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (313) SER462 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (314) GLN463 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence ldkqkeldskvrnvkdkvmcieheiksledlqdeydfkcktlqnrehlllkkmylmldnkrkevvhkiiellnvteltqnalindelvewkrrqqsaciggppnacldqlqnwftivaeslqqvrqqlkkleeleqkytyehdpitknkqvlwdrtfslfqqliqssfvverqpcmpthpqrplvlKtgvqftvklrllvklqelnynlkvkvlfdkdvnerntvkgfrkfnilgthtkvmnmeestngslaaefrhlqlkeqknagtrtnEgplivteelhslsfetqlcqpglvidlettslpvvviSNVSQlpsgwasilwynmlvaeprnlsffltppcarwaqlsevlswqfssvtkrglnvdqlnmlgekllgpnaspdglipwtrfckenindknfpfwlwiesilelikkhllplwndgcimgfiskererallkdqqpgtfllrfsessregaitftwversqnggepdfhavepytkkelsavtfpdiirnykvmaaenipenplkylypnidkdhafgkyysrgiktelisvs >1bg1_A:p53-like_transcription_factors;STAT;SH2_domain; title=TRANSCRIPTION FACTOR STAT3B/DNA COMPLEX organism=Mus musculus DNA sequence DT(B1001) DG(B1002) DC(B1003) DA(B1004) DT(B1005) DT(B1006) DT(B1007) DC(B1008) DC(B1009) DC(B1010) DG(B1011) DT(B1012) DA(B1013) DA(B1014) DA(B1015) DT(B1016) DC(B1017) DT(B1018) chainA (321) SER465 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 (322) ASN466 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 (325) GLN469 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vvtekqqmleqhlqdvrkrvqdleqkmkvvenlqddfdfnyktlksqgdsvtrqkmqqleqmltaldqmrrsivselagllsameyvqktltdeeladwkrrqqiaciggppnicldrlenwitslaesqlqtrqqikkleelqqkvsykgdpivqhrpmleerivelfrnlmksafvverqpcmpmhpdrplviktgvqfttkvrllvkfpelnyqlkikvcidkdsgdvaalrgsrkfnilgtntkvmnmeesnngslsaefkhltlreqrcgnggrancdaslivteelhlitfetevyhqglkidlethslpvvviSNicQmpnawasilwynmltnnpknvnfftkppigtwdqvaevlswqfssttkrglsieqlttlaekllgpgvnysgcqitwakfckenmagkgfsfwvwldniidlvkkyilalwnegyimgfiskererailstkppgtfllrfsesskeggvtftwvekdisgstqiqsvepytkqqlnnmsfaeiimgykimdatnilvsplvylypdipkeeafgkycraaplktkficvtpf >1bgb_A:Restriction_endonuclease-like; title=ECORV ENDONUCLEASE COMPLEX WITH 5'-CGGGATATCCC DNA organism=Escherichia coli DNA sequence DG(C802):DC(D911) DG(C803):DC(D910) DG(C804):DC(D909) DA(C805):DT(D908) DT(C806):DA(D907) DA(C807):DT(D906) DT(C808):DA(D905) DC(C809):DG(D904) DC(C810):DG(D903) DC(C811):DG(D902) chainA (105) THR106 0 0 1 9 0 0 0 0 0 0 (175) SER183 0 0 2 5 0 0 0 0 0 0 (177) ASN185 0 0 15 10 0 0 0 0 0 0 (178) THR186 0 0 0 8 4 6 0 0 0 0 (180) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqQnhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1bgb_AB:Restriction_endonuclease-like; title=ECORV ENDONUCLEASE COMPLEX WITH 5'-CGGGATATCCC DNA organism=Escherichia coli DNA sequence DG(D902):DC(C811) DG(D903):DC(C810) DG(D904):DC(C809) DA(D905):DT(C808) DT(D906):DA(C807) DA(D907):DT(C806) DT(D908):DA(C805) DC(D909):DG(C804) DC(D910):DG(C803) DC(D911):DG(C802) chainA (105) THR106 0 0 0 0 0 0 9 1 0 0 (175) SER183 0 0 0 0 0 0 5 2 0 0 (177) ASN185 0 0 0 0 0 0 10 15 0 0 (178) THR186 0 0 0 0 6 4 8 0 0 0 (180) ASN188 0 0 0 0 0 0 4 0 0 0 chainB ( 62) ASN70 0 0 0 0 0 1 4 4 0 0 ( 94) THR106 0 0 0 7 0 0 0 0 0 0 (166) SER183 0 0 2 5 0 0 0 0 0 0 (168) ASN185 0 0 15 10 0 0 0 0 0 0 (169) THR186 0 0 0 9 3 5 0 0 0 0 (171) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqnhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinaldvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkiKfTlggytsfirnntknivypfdqyiahwiigyvytrvslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1bhm_A:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA organism=Bacillus amyloliquefaciens DNA sequence DA(C2):DT(D11) DT(C3):DA(D10) DG(C4):DC(D9) DG(C5):DC(D8) DA(C6):DT(D7) DT(C7):DA(D6) DC(C8):DG(D5) DC(C9):DG(D4) DA(C10):DT(D3) DT(C11):DA(D2) chainA (116) ASN116 0 0 0 7 7 0 0 0 0 0 (122) ARG122 0 0 0 0 0 0 2 1 0 0 (153) THR153 0 0 0 0 3 0 0 0 0 0 (154) ASP154 0 0 4 5 0 0 0 0 0 0 (155) ARG155 0 24 20 5 0 0 0 0 0 0 (156) VAL156 0 0 0 0 1 0 0 0 0 0 (196) ASP196 0 0 0 0 0 9 5 1 0 0 (198) MET198 0 0 0 0 1 0 0 0 0 0 prot.sequence mevekefitdeakellskdkliqqaynevktsicspiwpatsktftinntekncngvvpikelcytlledtynwyrekpldilklekkkggpidvykefienselkrvgmefetgNissahRsmnklllglkhgeidlaiilmpikqlayylTDRVtnfeelepyfeltegqpfifigfnaeaynsnvplipkgsDgM >1bhm_AB:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA organism=Bacillus amyloliquefaciens DNA sequence DA(C2):DT(D11) DT(C3):DA(D10) DG(C4):DC(D9) DG(C5):DC(D8) DA(C6):DT(D7) DT(C7):DA(D6) DC(C8):DG(D5) DC(C9):DG(D4) DA(C10):DT(D3) DT(C11):DA(D2) chainA (116) ASN116 0 0 0 7 7 0 0 0 0 0 (122) ARG122 0 0 0 0 0 0 2 1 0 0 (153) THR153 0 0 0 0 3 0 0 0 0 0 (154) ASP154 0 0 4 5 0 0 0 0 0 0 (155) ARG155 0 24 20 5 0 0 0 0 0 0 (156) VAL156 0 0 0 0 1 0 0 0 0 0 (196) ASP196 0 0 0 0 0 9 5 1 0 0 (198) MET198 0 0 0 0 1 0 0 0 0 0 chainB (116) ASN116 0 0 0 0 0 9 6 0 0 0 (122) ARG122 0 0 4 2 0 0 0 0 0 0 (153) THR153 0 0 0 0 0 4 0 0 0 0 (154) ASP154 0 0 0 0 0 0 6 5 0 0 (155) ARG155 0 0 0 0 0 0 6 15 21 0 (156) VAL156 0 0 0 0 0 1 0 0 0 0 prot.sequence mevekefitdeakellskdkliqqaynevktsicspiwpatsktftinntekncngvvpikelcytlledtynwyrekpldilklekkkggpidvykefienselkrvgmefetgNissahRsmnklllglkhgeidlaiilmpikqlayylTDRVtnfeelepyfeltegqpfifigfnaeaynsnvplipkgsDgM/mevekefitdeakellskdkliqqaynevktsicspiwpatsktftinnteKncngvvpikelcytlledtynwyrekpldilklekkkggpidvykefienselkrvgmefetgNissahRsmnklllglkhgeidlaiilmpikqlayylTDRVtnfeelepyfeltegqpfifigfnaeaynsnvplipkgsdgmskrsikkwkd >1bl0_A:Homeodomain-like; title=MULTIPLE ANTIBIOTIC RESISTANCE PROTEIN (MARA)/DNA COMPLEX organism=Escherichia coli DNA sequence DG(B403):DC(C448) DG(B404):DC(C447) DA(B405):DT(C446) DT(B406):DA(C445) DT(B407):DA(C444) DT(B408):DA(C443) DA(B409):DT(C442) DG(B410):DC(C441) DC(B411):DG(C440) DA(B412):DT(C439) DA(B413):DT(C438) DA(B414):DT(C437) DA(B415):DT(C436) DC(B416):DG(C435) DG(B417):DC(C434) DT(B418):DA(C433) DG(B419):DC(C432) DG(B420):DC(C431) DC(B421):DG(C430) DA(B422):DT(C429) DT(B423):DA(C428) DC(B424):DG(C427) chainA ( 32) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 34) TRP42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 9 0 0 0 0 ( 35) HIS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 37) GLN45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 ( 38) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 6 2 0 0 ( 83) GLN91 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) GLN92 0 0 0 1 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) THR95 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG96 0 0 0 0 0 0 1 7 12 15 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence daitihsildwiednlesplslekvsersgySkWHlQRmfkketghslgqyirsrkmteiaqklkesnepilylaerygfesQQtlTRtfknyfdvpphkyrmtnmqgesrflhpl >1bnk_A:FMT_C-terminal_domain-like; title=HUMAN 3-METHYLADENINE DNA GLYCOSYLASE COMPLEXED TO DNA organism=Homo sapiens DNA sequence DG(D1):DC(E25) DA(D2):DT(E24) DC(D3):DG(E23) DA(D4):DT(E22) DT(D5):DA(E21) DG(D6):DC(E20) YRR(D7):DT(E19) DT(D8):DA(E18) DT(D9):DA(E17) DG(D10):DC(E16) DC(D11):DG(E15) DC(D12):DG(E14) chainA ( 83) TYR162 0 0 0 0 0 44 1 41 0 0 0 0 ( 85) MET164 0 0 0 0 0 0 2 3 0 0 0 0 ( 86) TYR165 0 0 0 0 0 0 0 5 1 0 0 0 prot.sequence kghltrlgleffdqpavplaraflgqvlvrrlpngtelrgriveteaylgpedeaahsrggrqtprnrgmfmkpgtlyvyiiYgMYfcmnissqgdgacvllraleplegletmrqlrsrvlkdrelcsgpsklcqalainksfdqrdlaqdeavwleravvaaarvgvghagewarkplrfyvrgspwvsvvdrvaeqd >1bnz_A:Chromo_domain-like; title=SSO7D HYPERTHERMOPHILE PROTEIN/DNA COMPLEX organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DG(C74):DC(B73) DT(C75):DA(B72) DA(C76):DT(B71) DA(C77):DT(B70) DT(C78):DA(B69) DT(C79):DA(B68) DA(C80):DT(B67) DC(C81):DG(B66) chainA ( 24) TRP24 0 0 0 4 8 0 0 0 ( 26) VAL26 0 0 0 0 13 6 0 0 ( 29) MET29 0 0 0 0 8 20 0 0 ( 31) SER31 0 0 0 0 4 0 0 0 ( 43) ARG43 0 8 7 1 0 0 0 0 ( 45) ALA45 0 0 0 0 1 0 0 0 prot.sequence matvkfkYkgeekevdiskikkvWrVgkMiSftydegggktgRgAvsekdapkellqmlekqkk >1bp7_AB:Homing_endonucleases; title=GROUP I MOBILE INTRON ENDONUCLEASE I-CREI COMPLEXED WITH HOMING SITE DNA organism=Chlamydomonas reinhardtii DNA sequence DC(21):DG(124) DG(22):DC(123) DA(23):DT(122) DA(24):DT(121) DA(25):DT(120) DC(26):DG(119) DT(27):DA(118) DG(28):DC(117) DT(29):DA(116) DC(210):DG(115) DT(211):DA(114) DC(212):DG(113) DA(213):DT(112) DC(214):DG(111) DG(215):DC(110) DA(216):DT(19) DC(217):DG(18) DG(218):DC(17) DT(219):DA(16) DT(220):DA(15) DT(221):DA(14) DT(222):DA(13) DG(223):DC(12) DC(224):DG(11) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 20 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 10 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 12 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 4 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 11 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 4 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 11 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 17 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 74) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsDyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld >1bp7_CD:Homing_endonucleases; title=GROUP I MOBILE INTRON ENDONUCLEASE I-CREI COMPLEXED WITH HOMING SITE DNA organism=Chlamydomonas reinhardtii DNA sequence DC(41):DG(324) DG(42):DC(323) DA(43):DT(322) DA(44):DT(321) DA(45):DT(320) DC(46):DG(319) DT(47):DA(318) DG(48):DC(317) DT(49):DA(316) DC(410):DG(315) DT(411):DA(314) DC(412):DG(313) DA(413):DT(312) DC(414):DG(311) DG(415):DC(310) DA(416):DT(39) DC(417):DG(38) DG(418):DC(37) DT(419):DA(36) DT(420):DA(35) DT(421):DA(34) DT(422):DA(33) DG(423):DC(32) DC(424):DG(31) chainC ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 1 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 5 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 17 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 4 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 10 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 20 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 ( 74) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 chainD ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 4 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 13 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 13 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 10 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsDyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >1bp7_D:Homing_endonucleases; title=GROUP I MOBILE INTRON ENDONUCLEASE I-CREI COMPLEXED WITH HOMING SITE DNA organism=Chlamydomonas reinhardtii DNA sequence DC(41):DG(324) DG(42):DC(323) DA(43):DT(322) DA(44):DT(321) DA(45):DT(320) DC(46):DG(319) DT(47):DA(318) DG(48):DC(317) DT(49):DA(316) DC(410):DG(315) DT(411):DA(314) DC(412):DG(313) DA(413):DT(312) DC(414):DG(311) DG(415):DC(310) DA(416):DT(39) DC(417):DG(38) DG(418):DC(37) DT(419):DA(36) DT(420):DA(35) DT(421):DA(34) DT(422):DA(33) DG(423):DC(32) DC(424):DG(31) chainD ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 4 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 13 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 13 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 10 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >1bpx_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA/DNA COMPLEX organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 30) HIS34 0 0 0 0 39 ( 31) LYS35 0 0 0 0 9 ( 34) ALA38 0 0 0 0 4 prot.sequence kapqetlnggitdmltelanfeknvsqaiHKyNAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1bpy_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA COMPLEXED WITH GAPPED DNA AND DDCTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 41 0 0 0 0 ( 26) LYS35 2 0 0 0 0 ( 29) ALA38 3 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1bpz_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DT(P10):DA(T7) DG(P11):DC(T6) chainA (230) LYS234 0 0 0 0 0 0 0 3 0 0 0 (267) TYR271 0 0 0 0 0 0 0 0 0 0 9 prot.sequence kapqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1bss_AB:Restriction_endonuclease-like; title=ECORV-T93A/DNA/CA2+ organism=Escherichia coli DNA sequence DA(D802):DT(C911) DA(D803):DT(C910) DG(D804):DC(C909) DA(D805):DT(C908) DT(D806):DA(C907) DA(D807):DT(C906) DT(D808):DA(C905) DC(D809):DG(C904) DT(D810):DA(C903) DT(D811):DA(C902) chainA ( 67) ASN70 0 0 0 0 0 1 7 5 0 0 ( 98) THR106 0 0 1 9 0 0 0 0 0 0 (168) SER183 0 0 4 7 0 0 0 0 0 0 (170) ASN185 0 0 16 13 0 0 0 0 0 0 (171) THR186 0 0 0 7 7 7 0 0 0 0 (173) ASN188 0 0 0 6 2 0 0 0 0 0 chainB ( 63) ASN70 0 0 6 7 0 0 0 0 0 0 ( 93) LYS104 0 0 0 0 0 0 0 0 1 0 ( 95) THR106 0 0 0 0 0 0 8 0 0 0 (166) SER183 0 0 0 0 0 0 6 4 0 0 (168) ASN185 0 0 0 0 0 0 11 16 0 0 (169) THR186 0 0 0 0 6 8 8 0 0 0 (171) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence lrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepqqNhypdftlykpsepnkkiaidikatytkikfTlggytsfirnntknivypfdqyiahwiigyvytrvktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikatytnkiKfTlggytsfirnntknivypfdqyiahwiigyvytrslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1bss_B:Restriction_endonuclease-like; title=ECORV-T93A/DNA/CA2+ organism=Escherichia coli DNA sequence DA(D802):DT(C911) DA(D803):DT(C910) DG(D804):DC(C909) DA(D805):DT(C908) DT(D806):DA(C907) DA(D807):DT(C906) DT(D808):DA(C905) DC(D809):DG(C904) DT(D810):DA(C903) DT(D811):DA(C902) chainB ( 63) ASN70 0 0 6 7 0 0 0 0 0 0 ( 93) LYS104 0 0 0 0 0 0 0 0 1 0 ( 95) THR106 0 0 0 0 0 0 8 0 0 0 (166) SER183 0 0 0 0 0 0 6 4 0 0 (168) ASN185 0 0 0 0 0 0 11 16 0 0 (169) THR186 0 0 0 0 6 8 8 0 0 0 (171) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikatytnkiKfTlggytsfirnntknivypfdqyiahwiigyvytrslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1bsu_AB:Restriction_endonuclease-like; title=STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASE organism=Escherichia coli DNA sequence DA(D802):DT(C911) DA(D803):DT(C910) DG(D804):DC(C909) DA(D805):DT(C908) 5CM(D806):DI(C907) DI(D807):5CM(C906) DT(D808):DA(C905) DC(D809):DG(C904) DT(D810):DA(C903) DT(D811):DA(C902) chainA ( 69) ASN70 0 0 0 0 0 0 2 2 0 0 (103) LYS104 0 1 0 0 0 0 0 0 0 0 (105) THR106 0 0 0 9 0 0 0 0 0 0 (175) SER183 0 0 4 8 0 0 0 0 0 0 (177) ASN185 0 0 16 11 0 0 0 0 0 0 (178) THR186 0 0 0 8 7 6 0 0 0 0 (180) ASN188 0 0 0 4 0 0 0 0 0 0 chainB ( 65) ASN70 0 0 4 6 1 0 0 0 0 0 ( 94) LYS104 0 0 0 0 0 0 0 0 1 0 ( 96) THR106 0 0 0 0 0 0 9 0 0 0 (168) SER183 0 0 0 0 0 0 6 3 0 0 (170) ASN185 0 0 0 0 0 0 10 16 0 0 (171) THR186 0 0 0 0 6 6 8 0 0 0 (173) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgr/slrsdlinalydedvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytniKfTlggytsfirnntknivypfdqyiahwiigyvytrvslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgr >1bsu_B:Restriction_endonuclease-like; title=STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASE organism=Escherichia coli DNA sequence DA(D802):DT(C911) DA(D803):DT(C910) DG(D804):DC(C909) DA(D805):DT(C908) 5CM(D806):DI(C907) DI(D807):5CM(C906) DT(D808):DA(C905) DC(D809):DG(C904) DT(D810):DA(C903) DT(D811):DA(C902) chainB ( 65) ASN70 0 0 4 6 1 0 0 0 0 0 ( 94) LYS104 0 0 0 0 0 0 0 0 1 0 ( 96) THR106 0 0 0 0 0 0 9 0 0 0 (168) SER183 0 0 0 0 0 0 6 3 0 0 (170) ASN185 0 0 0 0 0 0 10 16 0 0 (171) THR186 0 0 0 0 6 6 8 0 0 0 (173) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydedvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytniKfTlggytsfirnntknivypfdqyiahwiigyvytrvslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgr >1bua_A:Restriction_endonuclease-like; title=STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASE organism=Escherichia coli DNA sequence DA(C902):DT(D811) DA(C903):DT(D810) DG(C904):DC(D809) DA(C905):DT(D808) DC(C906):DI(D807) DI(C907):DC(D806) DT(C908):DA(D805) DC(C909):DG(D804) DT(C910):DA(D803) DT(C911):DA(D802) chainA ( 68) ASN70 0 0 5 7 1 0 0 0 0 0 (100) THR106 0 0 0 0 0 0 9 1 0 0 (170) SER183 0 0 0 0 0 0 7 2 0 0 (172) ASN185 0 0 0 0 0 0 12 16 0 0 (173) THR186 0 0 0 0 3 8 8 0 0 0 (175) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepqqNhypdftlykpsepnkkiaidikttytekikfTlggytsfirnntknivypfdqyiahwiigyvytrvktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgr >1bua_AB:Restriction_endonuclease-like; title=STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASE organism=Escherichia coli DNA sequence DA(C902):DT(D811) DA(C903):DT(D810) DG(C904):DC(D809) DA(C905):DT(D808) DC(C906):DI(D807) DI(C907):DC(D806) DT(C908):DA(D805) DC(C909):DG(D804) DT(C910):DA(D803) DT(C911):DA(D802) chainA ( 68) ASN70 0 0 5 7 1 0 0 0 0 0 (100) THR106 0 0 0 0 0 0 9 1 0 0 (170) SER183 0 0 0 0 0 0 7 2 0 0 (172) ASN185 0 0 0 0 0 0 12 16 0 0 (173) THR186 0 0 0 0 3 8 8 0 0 0 (175) ASN188 0 0 0 0 0 0 4 0 0 0 chainB ( 65) ASN70 0 0 0 0 0 6 5 3 0 0 ( 95) LYS104 0 1 0 0 0 0 0 0 0 0 ( 97) THR106 0 0 0 9 0 0 0 0 0 0 (168) SER183 0 0 4 6 0 0 0 0 0 0 (170) ASN185 0 0 19 10 0 0 0 0 0 0 (171) THR186 0 0 0 8 8 4 0 0 0 0 (173) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepqqNhypdftlykpsepnkkiaidikttytekikfTlggytsfirnntknivypfdqyiahwiigyvytrvktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgr/slrsdlinalydedvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkiKfTlggytsfirnntknivypfdqyiahwiigyvytrslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgr >1by4_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNA organism=Homo sapiens DNA sequence DC(F1531):DG(E1509) DT(F1532):DA(E1508) DG(F1533):DC(E1507) DA(F1534):DT(E1506) DC(F1535):DG(E1505) DC(F1536):DG(E1504) DT(F1537):DA(E1503) DT(F1538):DA(E1502) DT(F1539):DA(E1501) DG(F1540):DC(E1500) DA(F1541):DT(E1499) DC(F1542):DG(E1498) DC(F1543):DG(E1497) DT(F1544):DA(E1496) DA(F1545):DT(E1495) chainA ( 23) GLU1153 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 ( 26) LYS1156 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 ( 30) LYS1160 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 ( 31) ARG1161 0 0 0 0 0 0 0 0 12 8 0 0 0 0 0 prot.sequence tkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeer >1by4_BC:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNA organism=Homo sapiens DNA sequence DT(E1495):DA(F1545) DA(E1496):DT(F1544) DG(E1497):DC(F1543) DG(E1498):DC(F1542) DT(E1499):DA(F1541) DC(E1500):DG(F1540) DA(E1501):DT(F1539) DA(E1502):DT(F1538) DA(E1503):DT(F1537) DG(E1504):DC(F1536) DG(E1505):DC(F1535) DT(E1506):DA(F1534) DC(E1507):DG(F1533) DA(E1508):DT(F1532) DG(E1509):DC(F1531) DT(G2495):DA(H2545) DA(G2496):DT(H2544) DG(G2497):DC(H2543) DG(G2498):DC(H2542) DT(G2499):DA(H2541) DC(G2500):DG(H2540) DA(G2501):DT(H2539) DA(G2502):DT(H2538) DA(G2503):DT(H2537) DG(G2504):DC(H2536) DG(G2505):DC(H2535) DT(G2506):DA(H2534) DC(G2507):DG(H2533) DA(G2508):DT(H2532) DG(G2509):DC(H2531) chainB ( 26) GLU1253 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS1256 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) LYS1260 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG1261 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 22) GLU2153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 9 0 0 0 0 0 0 0 0 0 0 ( 25) LYS2156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS2160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG2161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 0 0 0 0 0 0 prot.sequence gsftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeer/khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeer >1c0w_ABCD:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain;C-terminal_domain_of_transcriptional_repressors; title=CRYSTAL STRUCTURE OF THE COBALT-ACTIVATED DIPHTHERIA TOXIN REPRESSOR- DNA COMPLEX REVEALS A METAL BINDING SH-LIKE DOMAIN organism=Corynebacterium diphtheriae DNA sequence DA(E401):DT(F521) DT(E402):DA(F520) DT(E403):DA(F519) DA(E404):DT(F518) DG(E405):DC(F517) DG(E406):DC(F516) DT(E408):DA(F514) DA(E409):DT(F513) DG(E410):DC(F512) DC(E411):DG(F511) DC(E412):DG(F510) DT(E413):DA(F509) DA(E414):DT(F508) DC(E416):DG(F506) DC(E417):DG(F505) DT(E418):DA(F504) DA(E419):DT(F503) DA(E420):DT(F502) DT(E421):DA(F501) chainA ( 36) SER37 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 38) PRO39 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR40 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 ( 42) GLN43 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 ( 46) ARG47 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 chainB ( 36) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 ( 38) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 3 4 0 ( 39) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 ( 41) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 42) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 chainC ( 36) SER37 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 38) PRO39 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 ( 39) THR40 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 ( 42) GLN43 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 ( 46) ARG47 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 chainD ( 36) SER37 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PRO39 0 5 3 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR40 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER42 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN43 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kdlvdttemylrtiyeleeegvtplrariaerleqSgPTvsQtvaRmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeacrwehvmsdeverrlvkvlkdvsrspfgnpipgldelgvivqineifqvetdqftqlldavellddlahtiri/kdlvdttemylrtiyeleeegvtplrariaerleqSgPTvSQtvarmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeacrwehvmsdeverrlvkvlkdvsrspfgnpipgldelgvapgtrvidaatsmprkvrivqineifqvetdqftqlldadirvgseveivdrdghitlshngkdvellddlahtirieel/kdlvdttemylrtiyeleeegvtplrariaerleqSgPTvsQtvaRmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeacrwehvmsdeverrlvkvlkdvsrspfgnpipgldelgvivqineifqvetdqftqlldadirvellddlahtir/kdlvdttemylrtiyeleeegvtplrariaerleqSgPTvSQtvarmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeacrwehvmsdeverrlvkvlkdvsrspfgnpipgldelgvvqineifqvetdqftqlldadirvvellddlahtir >1c0w_D:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain;C-terminal_domain_of_transcriptional_repressors; title=CRYSTAL STRUCTURE OF THE COBALT-ACTIVATED DIPHTHERIA TOXIN REPRESSOR- DNA COMPLEX REVEALS A METAL BINDING SH-LIKE DOMAIN organism=Corynebacterium diphtheriae DNA sequence DA(F501):DT(E421) DT(F502):DA(E420) DT(F503):DA(E419) DA(F504):DT(E418) DG(F505):DC(E417) DG(F506):DC(E416) DT(F508):DA(E414) DA(F509):DT(E413) DG(F510):DC(E412) DG(F511):DC(E411) DC(F512):DG(E410) DT(F513):DA(E409) DA(F514):DT(E408) DC(F516):DG(E406) DC(F517):DG(E405) DT(F518):DA(E404) DA(F519):DT(E403) DA(F520):DT(E402) DT(F521):DA(E401) chainD ( 36) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 ( 38) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 5 0 ( 39) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 ( 41) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 42) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 prot.sequence kdlvdttemylrtiyeleeegvtplrariaerleqSgPTvSQtvarmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeacrwehvmsdeverrlvkvlkdvsrspfgnpipgldelgvvqineifqvetdqftqlldadirvvellddlahtir >1c7u_A:SRF-like; title=COMPLEX OF THE DNA BINDING CORE DOMAIN OF THE TRANSCRIPTION FACTOR MEF2A WITH A 20MER OLIGONUCLEOTIDE organism=HOMO SAPIENS DNA sequence DC(C201):DG(D240) DT(C202):DA(D239) DC(C203):DG(D238) DG(C204):DC(D237) DG(C205):DC(D236) DC(C206):DG(D235) DT(C207):DA(D234) DA(C208):DT(D233) DT(C209):DA(D232) DT(C210):DA(D231) DA(C211):DT(D230) DA(C212):DT(D229) DT(C213):DA(D228) DA(C214):DT(D227) DG(C215):DC(D226) DC(C216):DG(D225) DC(C217):DG(D224) DG(C218):DC(D223) DA(C219):DT(D222) DG(C220):DC(D221) chainA ( 2) ARG2 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ARG14 0 0 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL18 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS22 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqitrimdeRnrqVtftKrkfglmkkayelsvladaeialiifnssnklfqyastdmdkvllkyteynep >1c7u_AB:SRF-like; title=COMPLEX OF THE DNA BINDING CORE DOMAIN OF THE TRANSCRIPTION FACTOR MEF2A WITH A 20MER OLIGONUCLEOTIDE organism=HOMO SAPIENS DNA sequence DC(D221):DG(C220) DT(D222):DA(C219) DC(D223):DG(C218) DG(D224):DC(C217) DG(D225):DC(C216) DC(D226):DG(C215) DT(D227):DA(C214) DA(D228):DT(C213) DT(D229):DA(C212) DT(D230):DA(C211) DA(D231):DT(C210) DA(D232):DT(C209) DT(D233):DA(C208) DA(D234):DT(C207) DG(D235):DC(C206) DC(D236):DG(C205) DC(D237):DG(C204) DG(D238):DC(C203) DA(D239):DT(C202) DG(D240):DC(C201) chainA ( 2) ARG2 0 0 0 0 0 0 0 0 0 0 0 0 12 7 0 0 0 0 0 0 ( 14) ARG14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 ( 18) VAL18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 22) LYS22 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 chainB ( 2) ARG102 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ARG114 0 0 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL118 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS122 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqitrimdeRnrqVtftKrkfglmkkayelsvladaeialiifnssnklfqyastdmdkvllkyteynep/gRkkiqitrimdeRnrqVtftKrkfglmkkayelsvladaeialiifnssnklfqyastdmdkvllkyteynep >1c8c_A:Chromo_domain-like; title=CRYSTAL STRUCTURES OF THE CHROMOSOMAL PROTEINS SSO7D/SAC7D BOUND TO DNA CONTAINING T-G MISMATCHED BASE PAIRS organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(B101):DC(C116) DT(B102):DG(C115) DG(B103):DC(C114) DA(B104):DT(C113) DT(B105):DA(C112) DC(B106):DG(C111) DG(B107):DT(C110) DC(B108):DG(C109) chainA ( 8) TYR8 0 0 0 1 0 0 0 0 ( 24) TRP24 0 0 10 2 0 0 0 0 ( 26) VAL26 0 6 5 0 0 0 0 0 ( 29) MET29 0 17 10 0 0 0 0 0 ( 31) SER31 0 0 5 0 0 0 0 0 ( 43) ARG43 0 0 0 0 7 8 0 0 ( 45) ALA45 0 0 1 0 0 0 0 0 prot.sequence matvkfkYkgeekqvdiskikkvWrVgkMiSftydegggktgRgAvsekdapkellqmlakqkk >1c9b_AEIM:Cyclin-like;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF A HUMAN TBP CORE DOMAIN-HUMAN TFIIB CORE DOMAIN COMPLEX BOUND TO AN EXTENDED, MODIFIED ADENOVIRAL MAJOR LATE PROMOTER (ADMLP) organism=HOMO SAPIENS DNA sequence DC(P102):DG(O18) DC(P103):DG(O17) DC(P104):DG(O16) DC(P105):DG(O15) DT(P106):DA(O14) DT(P107):DA(O13) DT(P108):DA(O12) DT(P109):DA(O11) DA(P110):DT(O10) DT(P111):DA(O9) DA(P112):DT(O8) DG(P113):DC(O7) DG(P114):DC(O6) DC(P115):DG(O5) DG(P116):DC(O4) DC(P117):DG(O3) DC(P118):DG(O2) DC(H101):DG(O1) DC(H102):DG(G18) DC(H103):DG(G17) DC(H104):DG(G16) DC(H105):DG(G15) DT(H106):DA(G14) DT(H107):DA(G13) DT(H108):DA(G12) DT(H109):DA(G11) DA(H110):DT(G10) DT(H111):DA(G9) DA(H112):DT(G8) DG(H113):DC(G7) DG(H114):DC(G6) DC(H115):DG(G5) DG(H116):DC(G4) DC(H117):DG(G3) DC(H118):DG(G2) DC(D101):DG(G1) DC(D102):DG(C18) DC(D103):DG(C17) DC(D104):DG(C16) DC(D105):DG(C15) DT(D106):DA(C14) DT(D107):DA(C13) DT(D108):DA(C12) DT(D109):DA(C11) DA(D110):DT(C10) DT(D111):DA(C9) DA(D112):DT(C8) DG(D113):DC(C7) DG(D114):DC(C6) DC(D115):DG(C5) DG(D116):DC(C4) DC(D117):DG(C3) DC(D118):DG(C2) DC(L101):DG(C1) DC(L102):DG(K18) DC(L103):DG(K17) DC(L104):DG(K16) DC(L105):DG(K15) DT(L106):DA(K14) DT(L107):DA(K13) DT(L108):DA(K12) DT(L109):DA(K11) DA(L110):DT(K10) DT(L111):DA(K9) DA(L112):DT(K8) DG(L113):DC(K7) DG(L114):DC(K6) DC(L115):DG(K5) DG(L116):DC(K4) DC(L117):DG(K3) DC(L118):DG(K2) chainA (174) VAL283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (174) VAL283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (174) VAL283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainM (174) VAL283 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadVtiRqsyrliyprapdlfptdfkfdtpvdklpql/sdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvaDVtiRqsyrliyprapdlfptdfkfdtpvdklpql/sdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadVtirqsyrliyprapdlfptdfkfdtpvdklpql/sdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadVtiRqsyrliyprapdlfptdfkfdtpvdklpql >1c9b_M:Cyclin-like; title=CRYSTAL STRUCTURE OF A HUMAN TBP CORE DOMAIN-HUMAN TFIIB CORE DOMAIN COMPLEX BOUND TO AN EXTENDED, MODIFIED ADENOVIRAL MAJOR LATE PROMOTER (ADMLP) organism=HOMO SAPIENS DNA sequence DG(K2):DC(L118) DG(K3):DC(L117) DC(K4):DG(L116) DG(K5):DC(L115) DC(K6):DG(L114) DC(K7):DG(L113) DT(K8):DA(L112) DA(K9):DT(L111) DT(K10):DA(L110) DA(K11):DT(L109) DA(K12):DT(L108) DA(K13):DT(L107) DA(K14):DT(L106) DG(K15):DC(L105) DG(K16):DC(L104) DG(K17):DC(L103) DG(K18):DC(L102) DG(C1):DC(L101) DG(C2):DC(D118) DG(C3):DC(D117) DC(C4):DG(D116) DG(C5):DC(D115) DC(C6):DG(D114) DC(C7):DG(D113) DT(C8):DA(D112) DA(C9):DT(D111) DT(C10):DA(D110) DA(C11):DT(D109) DA(C12):DT(D108) DA(C13):DT(D107) DA(C14):DT(D106) DG(C15):DC(D105) DG(C16):DC(D104) DG(C17):DC(D103) DG(C18):DC(D102) DG(G1):DC(D101) DG(G2):DC(H118) DG(G3):DC(H117) DC(G4):DG(H116) DG(G5):DC(H115) DC(G6):DG(H114) DC(G7):DG(H113) DT(G8):DA(H112) DA(G9):DT(H111) DT(G10):DA(H110) DA(G11):DT(H109) DA(G12):DT(H108) DA(G13):DT(H107) DA(G14):DT(H106) DG(G15):DC(H105) DG(G16):DC(H104) DG(G17):DC(H103) DG(G18):DC(H102) DG(O1):DC(H101) DG(O2):DC(P118) DG(O3):DC(P117) DC(O4):DG(P116) DG(O5):DC(P115) DC(O6):DG(P114) DC(O7):DG(P113) DT(O8):DA(P112) DA(O9):DT(P111) DT(O10):DA(P110) DA(O11):DT(P109) DA(O12):DT(P108) DA(O13):DT(P107) DA(O14):DT(P106) DG(O15):DC(P105) DG(O16):DC(P104) DG(O17):DC(P103) DG(O18):DC(P102) chainM (174) VAL283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadVtiRqsyrliyprapdlfptdfkfdtpvdklpql >1c9b_QR:Cyclin-like;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF A HUMAN TBP CORE DOMAIN-HUMAN TFIIB CORE DOMAIN COMPLEX BOUND TO AN EXTENDED, MODIFIED ADENOVIRAL MAJOR LATE PROMOTER (ADMLP) organism=HOMO SAPIENS DNA sequence DC(T102):DG(S18) DC(T103):DG(S17) DC(T104):DG(S16) DC(T105):DG(S15) DT(T106):DA(S14) DT(T107):DA(S13) DT(T108):DA(S12) DT(T109):DA(S11) DA(T110):DT(S10) DT(T111):DA(S9) DA(T112):DT(S8) DG(T113):DC(S7) DG(T114):DC(S6) DC(T115):DG(S5) DG(T116):DC(S4) DC(T117):DG(S3) DC(T118):DG(S2) chainQ (174) VAL283 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainR ( 10) ASN167 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 ( 12) VAL169 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 ( 40) PHE197 0 0 0 4 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) LEU212 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 ( 57) PHE214 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) VAL220 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 ( 65) THR222 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 (100) ASN257 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 (102) VAL259 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 (131) PHE288 0 0 0 0 0 0 0 0 0 19 6 0 0 0 0 0 0 (132) PRO289 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (146) LEU303 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 (148) PHE305 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (154) VAL311 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 (156) THR313 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 prot.sequence sdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadVtirqsyrliyprapdlfptdfkfdtpvdklpql/gsgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk >1ca6_A:Chromo_domain-like; title=INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DG(C109):DC(B108) DT(C110):DG(B107) DG(C111):DC(B106) DA(C112):DT(B105) DT(C113):DA(B104) DC(C114):DG(B103) DG(C115):DT(B102) DC(C116):DG(B101) chainA ( 8) TYR8 0 0 0 0 1 0 0 0 ( 24) TRP24 0 0 0 0 3 11 0 0 ( 26) VAL26 0 0 0 0 0 6 6 0 ( 29) MET29 0 0 0 0 0 11 18 0 ( 31) SER31 0 0 0 0 0 4 0 0 ( 42) ARG42 0 0 8 6 1 0 0 0 ( 44) ALA44 0 0 0 0 0 1 0 0 prot.sequence mvkvkfkYkgeekevdtskikkvWrVgkMvSftyddngktgRgAvsekdapkelldmlaraerekk >1cdw_A:TATA-box_binding_protein-like; title=HUMAN TBP CORE DOMAIN COMPLEXED WITH DNA organism=Homo sapiens DNA sequence DC(B1):DG(C116) DT(B2):DA(C115) DG(B3):DC(C114) DC(B4):DG(C113) DT(B5):DA(C112) DA(B6):DT(C111) DT(B7):DA(C110) DA(B8):DT(C109) DA(B9):DT(C108) DA(B10):DT(C107) DA(B11):DT(C106) DG(B12):DC(C105) DG(B13):DC(C104) DC(B14):DG(C103) DT(B15):DA(C102) DG(B16):DC(C101) chainA ( 9) ASN163 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 ( 11) VAL165 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 39) PHE193 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 ( 54) LEU208 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 56) PHE210 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 ( 62) VAL216 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 64) THR218 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 99) ASN253 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 (101) VAL255 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 (130) PHE284 0 0 0 0 8 26 0 0 0 0 0 0 0 0 0 0 (131) PRO285 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (145) LEU299 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 (147) PHE301 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (153) VAL307 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 (155) THR309 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 prot.sequence sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseensrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk >1cez_A:DNA/RNA_polymerases; title=CRYSTAL STRUCTURE OF A T7 RNA POLYMERASE-T7 PROMOTER COMPLEX organism=Enterobacteria phage T7 DNA sequence DT(N101):DA(T17) DA(N102):DT(T16) DA(N103):DT(T15) DT(N104):DA(T14) DA(N105):DT(T13) DC(N106):DG(T12) DG(N107):DC(T11) DA(N108):DT(T10) DC(N109):DG(T9) DT(N110):DA(T8) DC(N111):DG(T7) DA(N112):DT(T6) DC(N113):DG(T5) chainA ( 75) ARG96 14 12 7 0 0 0 0 0 0 0 0 0 0 ( 77) LYS98 0 0 0 2 8 1 0 0 0 0 0 0 0 (210) ARG231 0 0 0 0 0 0 0 0 0 0 0 1 0 (216) VAL237 0 0 0 0 0 0 0 0 0 0 0 0 20 (219) ASP240 0 0 0 0 0 0 0 0 0 0 0 0 9 (725) ARG746 0 0 0 0 0 0 0 0 0 0 10 15 0 (727) ASN748 0 0 0 0 0 1 8 1 0 0 0 0 0 (735) ARG756 0 0 0 0 0 0 0 8 14 11 0 0 0 (737) GLN758 0 0 0 0 0 0 0 0 0 10 10 0 0 (739) THR760 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence iakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmfplittllpkmiarindwfeevkakRgKrptafqflqeikpeavayitikttlacltsadnttvqavasaigraiedearfgrirdleakhfkknveeqlnkrvghvykkafmqvveadmlskgllggeawsswhkedsihvgvrciemliestgmvslhRqnagvVgqDsetielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiereelpmkpedidmnpealtawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvtvtdentgeisekvklgtkalagqwlaygvtrsvtkrsvmtlaygskefgfrqqvledtiqpaidsgkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtRlNlmflgqfRlQpTintnkdseidahkqesgiapnfvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa >1cf7_A:"Winged_helix"_DNA-binding_domain; title=STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP organism=HOMO SAPIENS DNA sequence DT(C501):DA(D615) DT(C502):DA(D614) DT(C503):DA(D613) DT(C504):DA(D612) DC(C505):DG(D611) DG(C506):DC(D610) DC(C507):DG(D609) DG(C508):DC(D608) DC(C509):DG(D607) DG(C510):DC(D606) DG(C511):DC(D605) DT(C512):DA(D604) DT(C513):DA(D603) DT(C514):DA(D602) DT(C515):DA(D601) chainA ( 2) ARG17 0 0 1 4 6 6 0 0 0 0 0 0 0 0 0 ( 41) ARG56 0 0 0 0 0 0 0 14 13 11 0 0 0 0 0 ( 42) ARG57 0 0 0 0 0 0 13 10 0 0 0 0 0 0 0 ( 44) TYR59 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 prot.sequence sRhekslgllttkfvsllqeakdgvldlklaadtlavrqkRRiYditnvlegigliekksknsiqwk >1cf7_AB:"Winged_helix"_DNA-binding_domain; title=STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP organism=HOMO SAPIENS DNA sequence DA(D601):DT(C515) DA(D602):DT(C514) DA(D603):DT(C513) DA(D604):DT(C512) DC(D605):DG(C511) DC(D606):DG(C510) DG(D607):DC(C509) DC(D608):DG(C508) DG(D609):DC(C507) DC(D610):DG(C506) DG(D611):DC(C505) DA(D612):DT(C504) DA(D613):DT(C503) DA(D614):DT(C502) DA(D615):DT(C501) chainA ( 2) ARG17 0 0 0 0 0 0 0 0 0 6 6 4 1 0 0 ( 41) ARG56 0 0 0 0 0 11 13 14 0 0 0 0 0 0 0 ( 42) ARG57 0 0 0 0 0 0 0 10 13 0 0 0 0 0 0 ( 44) TYR59 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 chainB ( 51) ASN118 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 54) ARG121 0 0 0 0 0 0 0 0 5 13 15 0 0 0 0 ( 55) ARG122 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 ( 57) TYR124 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 prot.sequence sRhekslgllttkfvsllqeakdgvldlklaadtlavrqkRRiYditnvlegigliekksknsiqwk/gkglrhfsmkvcekvqrkgttsynevadelvseftnsnnhlaadsaydqkNirRRvYdalnvlmamniiskekkeikwiglp >1cf7_B:"Winged_helix"_DNA-binding_domain; title=STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP organism=HOMO SAPIENS DNA sequence DT(C501):DA(D615) DT(C502):DA(D614) DT(C503):DA(D613) DT(C504):DA(D612) DC(C505):DG(D611) DG(C506):DC(D610) DC(C507):DG(D609) DG(C508):DC(D608) DC(C509):DG(D607) DG(C510):DC(D606) DG(C511):DC(D605) DT(C512):DA(D604) DT(C513):DA(D603) DT(C514):DA(D602) DT(C515):DA(D601) chainB ( 51) ASN118 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 54) ARG121 0 0 0 0 15 13 5 0 0 0 0 0 0 0 0 ( 55) ARG122 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 ( 57) TYR124 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 prot.sequence gkglrhfsmkvcekvqrkgttsynevadelvseftnsnnhlaadsaydqkNirRRvYdalnvlmamniiskekkeikwiglp >1cgp_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'- CYCLIC-MONOPHOSPHATE organism=ESCHERICHIA COLI DNA sequence DC(E17):DG(D15) DG(E18):DC(D14) DA(E19):DT(D13) DA(E20):DT(D12) DA(E21):DT(D11) DA(E22):DT(D10) DG(E23):DC(D9) DT(E24):DA(D8) DG(E25):DC(D7) DT(E26):DA(D6) DG(E27):DC(D5) DA(E28):DT(D4) DC(E29):DG(D3) DA(E30):DT(C33) DT(E31):DA(C32) DA(E32):DT(C31) DT(E33):DA(C30) DG(F3):DC(C29) DT(F4):DA(C28) DC(F5):DG(C27) DA(F6):DT(C26) DC(F7):DG(C25) DA(F8):DT(C24) DC(F9):DG(C23) DT(F10):DA(C22) DT(F11):DA(C21) DT(F12):DA(C20) DT(F13):DA(C19) DC(F14):DG(C18) DG(F15):DC(C17) chainA (171) SER179 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG180 0 0 0 0 0 0 0 19 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLU181 0 0 0 0 0 0 0 0 0 4 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR182 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG185 0 0 0 0 0 0 0 0 0 3 8 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcSRETvgRilkmledqnlisahgktivv >1cgp_AB:C-terminal_domain_of_RNA_polymerase_alpha_subunit;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'- CYCLIC-MONOPHOSPHATE organism=ESCHERICHIA COLI DNA sequence DC(C17):DG(F15) DG(C18):DC(F14) DA(C19):DT(F13) DA(C20):DT(F12) DA(C21):DT(F11) DA(C22):DT(F10) DG(C23):DC(F9) DT(C24):DA(F8) DG(C25):DC(F7) DT(C26):DA(F6) DG(C27):DC(F5) DA(C28):DT(F4) DC(C29):DG(F3) DA(C30):DT(E33) DT(C31):DA(E32) DA(C32):DT(E31) DT(C33):DA(E30) DG(D3):DC(E29) DT(D4):DA(E28) DC(D5):DG(E27) DA(D6):DT(E26) DC(D7):DG(E25) DA(D8):DT(E24) DC(D9):DG(E23) DT(D10):DA(E22) DT(D11):DA(E21) DT(D12):DA(E20) DT(D13):DA(E19) DC(D14):DG(E18) DG(D15):DC(E17) chainA (171) SER179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (172) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 19 0 0 0 0 0 0 0 (173) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 4 0 0 0 0 0 0 0 0 0 (174) THR182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (177) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 8 3 0 0 0 0 0 0 0 0 0 chainB (171) SER179 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG180 0 0 0 0 0 0 0 19 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLU181 0 0 0 0 0 0 0 0 0 6 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR182 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG185 0 0 0 0 0 0 0 0 0 6 5 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcSRETvgRilkmledqnlisahgktivv/ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcSRETvgRilkmledqnlisahgktivv >1cit_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=DNA-BINDING MECHANISM OF THE MONOMERIC ORPHAN NUCLEAR RECEPTOR NGFI-B organism=Rattus norvegicus DNA sequence DC(B402):DG(C434) DC(B403):DG(C433) DG(B404):DC(C432) DA(B405):DT(C431) DA(B406):DT(C430) DA(B407):DT(C429) DA(B408):DT(C428) DG(B409):DC(C427) DG(B410):DC(C426) DT(B411):DA(C425) DC(B412):DG(C424) DA(B413):DT(C423) DT(B414):DA(C422) DG(B415):DC(C421) DC(B416):DG(C420) DG(B417):DC(C419) chainA ( 12) CYS241 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 21) GLU250 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 ( 24) LYS253 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 ( 28) LYS257 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 29) ARG258 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 ( 82) ARG311 0 0 0 0 0 1 12 11 0 0 0 0 0 0 0 0 ( 84) ARG313 0 0 3 16 8 0 0 0 0 0 0 0 0 0 0 0 prot.sequence grcavcgdnasCqhygvrtcEgcKgffKRtvqksakyiclankdcpvdkrrrnrcqfcrfqkclavgmvkevvrtdslkgrRgRlpskp >1cjg_A:lambda_repressor-like_DNA-binding_domains; title=NMR STRUCTURE OF LAC REPRESSOR HP62-DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DG(C1):DC(D22) DA(C2):DT(D21) DA(C3):DT(D20) DT(C4):DA(D19) DT(C5):DA(D18) DG(C6):DC(D17) DT(C7):DA(D16) DG(C8):DC(D15) DA(C9):DT(D14) DG(C10):DC(D13) DC(C11):DG(D12) DG(C12):DC(D11) DC(C13):DG(D10) DT(C14):DA(D9) DC(C15):DG(D8) DA(C16):DT(D7) DC(C17):DG(D6) DA(C18):DT(D5) DA(C19):DT(D4) DT(C20):DA(D3) DT(C21):DA(D2) DC(C22):DG(D1) chainA ( 6) LEU6 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) TYR7 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) HIS29 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkpvtLYdvaeyagvsYQtvsrvvnqasHvsaktrekveaamaelnyipnrvAqqLAgkqsl >1cjg_AB:lambda_repressor-like_DNA-binding_domains; title=NMR STRUCTURE OF LAC REPRESSOR HP62-DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DG(C1):DC(D22) DA(C2):DT(D21) DA(C3):DT(D20) DT(C4):DA(D19) DT(C5):DA(D18) DG(C6):DC(D17) DT(C7):DA(D16) DG(C8):DC(D15) DA(C9):DT(D14) DG(C10):DC(D13) DC(C11):DG(D12) DG(C12):DC(D11) DC(C13):DG(D10) DT(C14):DA(D9) DC(C15):DG(D8) DA(C16):DT(D7) DC(C17):DG(D6) DA(C18):DT(D5) DA(C19):DT(D4) DT(C20):DA(D3) DT(C21):DA(D2) DC(C22):DG(D1) chainA ( 6) LEU6 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) TYR7 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) HIS29 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 chainB ( 6) LEU6 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 7) TYR7 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 2 0 0 0 0 0 ( 29) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 prot.sequence mkpvtLYdvaeyagvsYQtvsrvvnqasHvsaktrekveaamaelnyipnrvAqqLAgkqsl/mkpvtLYdvaeyagvsYQtvsrvvnqasHvsaktrekveaamaelnyipnrvAqqLAgkqsl >1ckq_A:Restriction_endonuclease-like; title=PRE-TRANSITION STATE ECO RI ENDONUCLEASE/COGNATE DNA (TCGCGAATTCGCG) COMPLEX organism=ESCHERICHIA COLI DNA sequence DT(B1) DC(B2) DG(B3) DC(B4) DG(B5) DA(B6) DA(B7) DT(B8) DT(B9) DC(B10) DG(B11) DC(B12) DG(B13) chainA ( 99) GLN115 0 0 0 0 0 0 0 4 0 0 0 0 0 (121) MET137 0 0 0 0 0 0 0 0 2 1 0 0 0 (122) ALA138 0 0 0 0 0 0 0 0 0 3 1 0 0 (125) ASN141 0 0 0 0 0 0 0 3 0 0 0 0 0 (126) ALA142 0 0 0 0 0 0 6 5 0 0 0 0 0 (129) ARG145 0 0 0 0 0 5 11 0 0 0 0 0 0 prot.sequence sqgvigifgdyakahdlavgevsklvkkalsneypqlsfryrdsikkteinealkkidpdlggtlfvsnssikpdggivevkddygewrvvlvaeakhQgkdiinirngllvgkrgdqdlMAagNAieRshkniseianfmlseshfpyvlflegsnfltenisitrpdgrvvnleynsgilnrldrltaanygmpinsnlcinkfvnhkdksimlqaasiytqgdgrewdskimfeimfdisttslrvlgrdlfeqltsk >1ckt_A:HMG-box; title=CRYSTAL STRUCTURE OF HMG1 DOMAIN A BOUND TO A CISPLATIN-MODIFIED DNA DUPLEX organism=Rattus norvegicus DNA sequence DC(B101):DG(C216) DC(B102):DG(C215) 5IU(B103):DA(C214) DC(B104):DG(C213) DT(B105):DA(C212) DC(B106):DG(C211) DT(B107):DA(C210) DG(B108):DC(C209) DG(B109):DC(C208) DA(B110):DT(C207) DC(B111):DG(C206) DC(B112):DG(C205) DT(B113):DA(C204) DT(B114):DA(C203) DC(B115):DG(C202) DC(B116):DG(C201) chainA ( 9) TYR15 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 13) VAL19 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 31) PHE37 0 0 0 0 0 0 0 36 46 0 0 0 0 0 0 0 ( 35) SER41 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 prot.sequence kprgkmssYaffVqtcreehkkkhpdasvnFsefSkkcserwktmsakekgkfedmakadkaryeremkty >1cl8_A:Restriction_endonuclease-like; title=A PRE-TRANSITION STATE ECO RI ENDONUCLEASE/COGNATE DNA (TCGCGAPTTCGCG) COMPLEX WITH DNA BASE ANALOG PURINE (P) organism=? DNA sequence DT(B1) DC(B2) DG(B3) DC(B4) DG(B5) DA(B6) DT(B8) DT(B9) DC(B10) DG(B11) DC(B12) DG(B13) chainA ( 99) GLN115 0 0 0 0 0 0 4 0 0 0 0 0 (121) MET137 0 0 0 0 0 0 0 2 2 0 0 0 (122) ALA138 0 0 0 0 0 0 0 0 3 1 0 0 (125) ASN141 0 0 0 0 0 0 3 0 0 0 0 0 (126) ALA142 0 0 0 0 0 0 5 0 0 0 0 0 (129) ARG145 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence sqgvigifgdyakahdlavgevsklvkkalsneypqlsfryrdsikkteinealkkidpdlggtlfvsnssikpdggivevkddygewrvvlvaeakhQgkdiinirngllvgkrgdqdlMAagNAieRshkniseianfmlseshfpyvlflegsnfltenisitrpdgrvvnleynsgilnrldrltaanygmpinsnlcinkfvnhkdksimlqaasiytqgdgrewdskimfeimfdisttslrvlgrdlfeqltsk >1clq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF A REPLICATION FORK DNA POLYMERASE EDITING COMPLEX AT 2.7 A RESOLUTION organism=Enterobacteria phage RB69 DNA sequence DG(E2):DG(D3) DG(E4):DC(D4) DG(E5):DC(D5) DA(E6):DT(D6) DA(E7):DT(D7) DC(E8):DG(D8) DT(E9):DA(D9) DA(E10):DT(D10) DC(E11):DG(D11) DT(E12):DA(D12) chainA (217) ASN217 5 0 0 0 0 0 0 0 0 0 (220) SER220 7 0 0 0 0 0 0 0 0 0 (255) ASN255 0 0 4 0 0 0 0 0 0 0 (260) ARG260 15 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwNveSfdipyvynriknifgestakrlsphrktrvkvieNmygsReiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniidvyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkkryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >1cma_A:Ribbon-helix-helix; title=MET REPRESSOR/DNA COMPLEX + S-ADENOSYL-METHIONINE organism=ESCHERICHIA COLI DNA sequence DA(D11):DT(C10) DG(D12):DC(C9) DA(D13):DT(C8) DC(D14):DG(C7) DG(D15):DC(C6) DT(D16):DA(C5) DC(D17):DG(C4) DT(D18):DA(C3) DA(D19):DT(C2) chainA ( 23) LYS23 7 9 0 0 0 0 0 0 0 ( 25) THR25 0 0 0 0 3 6 2 0 0 prot.sequence aewsgeyispyaehgkkseqvkKiTvsiplkvlkiltdertrrqvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey >1cma_AB:Ribbon-helix-helix; title=MET REPRESSOR/DNA COMPLEX + S-ADENOSYL-METHIONINE organism=ESCHERICHIA COLI DNA sequence DT(C2):DA(D19) DA(C3):DT(D18) DG(C4):DC(D17) DA(C5):DT(D16) DC(C6):DG(D15) DG(C7):DC(D14) DT(C8):DA(D13) DC(C9):DG(D12) DT(C10):DA(D11) chainA ( 23) LYS23 0 0 0 0 0 0 0 9 7 ( 25) THR25 0 0 2 6 3 0 0 0 0 chainB ( 23) LYS23 0 3 7 1 0 0 0 0 0 ( 25) THR25 0 0 0 0 0 1 6 3 0 prot.sequence aewsgeyispyaehgkkseqvkKiTvsiplkvlkiltdertrrqvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvsiplkvlkiltdertrrqvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey >1co0_A:TrpR-like; title=NMR STUDY OF TRP REPRESSOR-MTR OPERATOR DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DT(E1):DA(F20) DG(E2):DC(F19) DT(E3):DA(F18) DA(E4):DT(F17) DC(E5):DG(F16) DT(E6):DA(F15) DC(E7):DG(F14) DG(E8):DC(F13) DT(E9):DA(F12) DG(E10):DC(F11) DT(E11):DA(F10) DA(E12):DT(F9) DC(E13):DG(F8) DT(E14):DA(F7) DG(E15):DC(F6) DG(E16):DC(F5) DT(E17):DA(F4) DA(E18):DT(F3) DC(E19):DG(F2) DA(E20):DT(F1) chainA ( 66) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 19 21 0 ( 69) LYS72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 12 0 0 ( 74) ALA77 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 76) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 11 1 0 0 0 ( 77) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 1 0 0 0 0 ( 78) THR81 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 79) ILE82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 80) THR83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 ( 81) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 prot.sequence qspysaamaeqrhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsqRelKnelgAgIATITRgsnslkaapvelrqwleevllksd >1co0_AB:TrpR-like; title=NMR STUDY OF TRP REPRESSOR-MTR OPERATOR DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DT(E1):DA(F20) DG(E2):DC(F19) DT(E3):DA(F18) DA(E4):DT(F17) DC(E5):DG(F16) DT(E6):DA(F15) DC(E7):DG(F14) DG(E8):DC(F13) DT(E9):DA(F12) DG(E10):DC(F11) DT(E11):DA(F10) DA(E12):DT(F9) DC(E13):DG(F8) DT(E14):DA(F7) DG(E15):DC(F6) DG(E16):DC(F5) DT(E17):DA(F4) DA(E18):DT(F3) DC(E19):DG(F2) DA(E20):DT(F1) chainA ( 66) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 19 21 0 ( 69) LYS72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 12 0 0 ( 74) ALA77 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 76) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 11 1 0 0 0 ( 77) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 1 0 0 0 0 ( 78) THR81 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 79) ILE82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 80) THR83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 ( 81) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 chainB ( 76) ILE79 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ALA80 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR83 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG84 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qspysaamaeqrhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsqRelKnelgAgIATITRgsnslkaapvelrqwleevllksd/qspysaamaeqrhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsqrelknelgagIAtiTRgsnslkaapvelrqwleevllksd >1cqt_AI:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=CRYSTAL STRUCTURE OF A TERNARY COMPLEX CONTAINING AN OCA-B PEPTIDE, THE OCT-1 POU DOMAIN, AND AN OCTAMER ELEMENT organism=HOMO SAPIENS DNA sequence DC(N217):DG(M215) DC(N218):DG(M214) DT(N219):DA(M213) DT(N220):DA(M212) DA(N221):DT(M211) DT(N222):DA(M210) DT(N223):DA(M209) DT(N224):DA(M208) DG(N225):DC(M207) DC(N226):DG(M206) DA(N227):DT(M205) DT(N228):DA(M204) DA(N229):DT(M203) DC(N230):DG(M202) chainA ( 42) SER43 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 10 11 0 ( 44) THR45 0 0 0 0 0 0 0 0 5 5 8 0 0 0 ( 47) SER48 0 0 0 0 0 0 0 0 0 0 2 1 0 0 ( 48) ARG49 0 0 0 0 0 0 0 8 17 2 1 0 0 0 ( 54) LEU55 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 58) ASN59 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 75) ARG102 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 78) ARG105 0 0 0 0 0 0 6 12 18 0 0 0 0 0 (120) VAL147 0 0 0 0 1 2 0 0 0 0 0 0 0 0 (123) CYS150 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (124) ASN151 0 0 0 0 1 10 6 0 0 0 0 0 0 0 (127) GLN154 0 0 0 14 10 1 0 0 0 0 0 0 0 0 chainI ( 4) TYR303 0 0 0 0 0 0 0 0 4 1 0 0 0 0 ( 7) VAL306 0 0 0 0 0 3 5 6 0 0 0 0 0 0 ( 9) VAL308 0 0 0 0 0 0 1 1 0 0 0 0 0 0 prot.sequence epsdleeleqfaktfkqrriklgftqgdvglamgklygndfSQTtiSRfealnLsfkNmcklkpllekwlndaeRkkRtsietnirvaleksflenqkptseeitmiadqlnmekevirVwfCNrrQkekrinp/arpYqgVrVkepvkellrrkrg >1cqt_BJ:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=CRYSTAL STRUCTURE OF A TERNARY COMPLEX CONTAINING AN OCA-B PEPTIDE, THE OCT-1 POU DOMAIN, AND AN OCTAMER ELEMENT organism=HOMO SAPIENS DNA sequence DG(O702):DC(P730) DT(O703):DA(P729) DA(O704):DT(P728) DT(O705):DA(P727) DG(O706):DC(P726) DC(O707):DG(P725) DA(O708):DT(P724) DA(O709):DT(P723) DA(O710):DT(P722) DT(O711):DA(P721) DA(O712):DT(P720) DA(O713):DT(P719) chainB ( 38) SER543 0 0 0 0 0 1 0 0 0 0 0 0 ( 39) GLN544 0 11 14 3 0 0 0 0 0 0 0 0 ( 40) THR545 0 0 0 3 5 10 0 0 0 0 0 0 ( 41) THR546 0 0 0 0 0 0 1 0 0 0 0 0 ( 43) SER548 0 0 1 1 0 0 0 0 0 0 0 0 ( 44) ARG549 0 0 0 0 1 12 10 0 0 0 0 0 ( 50) LEU555 0 0 0 0 0 0 1 0 0 0 0 0 ( 54) ASN559 0 0 0 0 0 0 1 0 0 0 0 0 ( 74) ARG605 0 0 0 0 1 14 4 7 0 0 0 0 (115) VAL647 0 0 0 0 0 0 0 0 2 0 0 0 (118) CYS650 0 0 0 0 0 0 0 0 0 0 0 1 (119) ASN651 0 0 0 0 0 0 0 4 8 3 0 0 (122) GLN654 0 0 0 0 0 0 0 0 3 13 10 0 chainJ ( 7) VAL806 0 0 0 0 0 0 8 7 5 0 0 0 prot.sequence dleeleqfaktfkqrriklgftqgdvglamgklyndfSQTTiSRfealnLsfkNmcklkpllekwlndaerkkRtsietnirvaleksflenqktseeitmiadqlnmekevirVwfCNrrQkekrinp/arpyqgVrvkepvkellrrkrgh >1cqt_I: title=CRYSTAL STRUCTURE OF A TERNARY COMPLEX CONTAINING AN OCA-B PEPTIDE, THE OCT-1 POU DOMAIN, AND AN OCTAMER ELEMENT organism=HOMO SAPIENS DNA sequence DC(N217):DG(M215) DC(N218):DG(M214) DT(N219):DA(M213) DT(N220):DA(M212) DA(N221):DT(M211) DT(N222):DA(M210) DT(N223):DA(M209) DT(N224):DA(M208) DG(N225):DC(M207) DC(N226):DG(M206) DA(N227):DT(M205) DT(N228):DA(M204) DA(N229):DT(M203) DC(N230):DG(M202) chainI ( 4) TYR303 0 0 0 0 0 0 0 0 4 1 0 0 0 0 ( 7) VAL306 0 0 0 0 0 3 5 6 0 0 0 0 0 0 ( 9) VAL308 0 0 0 0 0 0 1 1 0 0 0 0 0 0 prot.sequence arpYqgVrVkepvkellrrkrg >1crx_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRE RECOMBINASE/DNA COMPLEX REACTION INTERMEDIATE I organism=Enterobacteria phage P1 DNA sequence DA(E2):DT(D19) DT(E3):DA(D18) DA(E4):DT(D17) DA(E5):DT(D16) DC(E6):DG(D15) DT(E7):DA(D14) DT(E8):DA(D13) DC(E9):DG(D12) DG(E10):DC(D11) DT(E11):DA(D10) DA(E12):DT(D9) DT(E13):DA(D8) DA(E14):DT(D7) DG(E15):DC(D6) DC(E16):DG(D5) DA(F1):DT(D4) DT(F2):DA(D3) chainA ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 7 6 7 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 6 5 4 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (225) LYS244 7 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 2 8 14 18 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcrvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled >1cyq_A:His-Me_finger_endonucleases; title=INTRON ENCODED HOMING ENDONUCLEASE I-PPOI (H98A)/DNA HOMING SITE COMPLEX organism=Physarum polycephalum DNA sequence DT(D502):DA(C421) DG(D503):DC(C420) DA(D504):DT(C419) DC(D505):DG(C418) DT(D506):DA(C417) DC(D507):DG(C416) DT(D508):DA(C415) DC(D509):DG(C414) DT(D510):DA(C413) DT(D511):DA(C412) DA(D512):DT(C411) DA(D513):DT(C410) DG(D514):DC(C409) DA(D515):DT(C408) DG(D516):DC(C407) DA(D517):DT(C406) DG(D518):DC(C405) DT(D519):DA(C404) DC(D520):DG(C403) DA(D521):DT(C402) chainA ( 54) ALA55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 56) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 5 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 ( 64) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 5 ( 66) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 71) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 10 0 0 0 (115) LEU116 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasalchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >1cyq_AB:His-Me_finger_endonucleases; title=INTRON ENCODED HOMING ENDONUCLEASE I-PPOI (H98A)/DNA HOMING SITE COMPLEX organism=Physarum polycephalum DNA sequence DT(C402):DA(D521) DG(C403):DC(D520) DA(C404):DT(D519) DC(C405):DG(D518) DT(C406):DA(D517) DC(C407):DG(D516) DT(C408):DA(D515) DC(C409):DG(D514) DT(C410):DA(D513) DT(C411):DA(D512) DA(C412):DT(D511) DA(C413):DT(D510) DG(C414):DC(D509) DA(C415):DT(D508) DG(C416):DC(D507) DA(C417):DT(D506) DG(C418):DC(D505) DT(C419):DA(D504) DC(C420):DG(D503) DA(C421):DT(D502) chainA ( 54) ALA55 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN57 0 0 0 0 5 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 11 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS65 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR67 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL72 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 10 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) LEU116 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 chainB ( 54) ALA255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 56) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 5 0 0 0 0 ( 60) ARG261 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 ( 62) GLN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 ( 64) LYS265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 7 ( 66) THR267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 10 0 0 0 (115) LEU316 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 (119) LYS320 0 0 0 0 0 0 0 0 0 1 3 2 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasalchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv/altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvvhRwgshtvpfllepdningktctasalchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >1cz0_AB:His-Me_finger_endonucleases; title=INTRON ENCODED HOMING ENDONUCLEASE I-PPOI/DNA COMPLEX LACKING CATALYTIC METAL ION organism=Physarum polycephalum DNA sequence DT(C402):DA(D521) DG(C403):DC(D520) DA(C404):DT(D519) DC(C405):DG(D518) DT(C406):DA(D517) DC(C407):DG(D516) DT(C408):DA(D515) DC(C409):DG(D514) DT(C410):DA(D513) DT(C411):DA(D512) DA(C412):DT(D511) DA(C413):DT(D510) DG(C414):DC(D509) DA(C415):DT(D508) DG(C416):DC(D507) DA(C417):DT(D506) DG(C418):DC(D505) DT(C419):DA(D504) DC(C420):DG(D503) DA(C421):DT(D502) chainA ( 54) ALA55 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN57 0 0 0 0 4 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS65 5 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR67 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL72 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 10 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) LEU116 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 chainB ( 54) ALA255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 56) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 4 0 0 0 0 ( 60) ARG261 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 ( 62) GLN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 ( 64) LYS265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 5 ( 66) THR267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 11 0 0 0 (115) LEU316 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 (119) LYS320 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv/altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvvhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >1cz0_B:His-Me_finger_endonucleases; title=INTRON ENCODED HOMING ENDONUCLEASE I-PPOI/DNA COMPLEX LACKING CATALYTIC METAL ION organism=Physarum polycephalum DNA sequence DT(D502):DA(C421) DG(D503):DC(C420) DA(D504):DT(C419) DC(D505):DG(C418) DT(D506):DA(C417) DC(D507):DG(C416) DT(D508):DA(C415) DC(D509):DG(C414) DT(D510):DA(C413) DT(D511):DA(C412) DA(D512):DT(C411) DA(D513):DT(C410) DG(D514):DC(C409) DA(D515):DT(C408) DG(D516):DC(C407) DA(D517):DT(C406) DG(D518):DC(C405) DT(D519):DA(C404) DC(D520):DG(C403) DA(D521):DT(C402) chainB ( 54) ALA255 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN257 0 0 0 0 4 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG261 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN263 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS265 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR267 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG274 0 0 0 11 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) LEU316 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 (119) LYS320 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvvhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >1d02_A:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF MUNI RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNA organism=MYCOPLASMA DNA sequence DG(C1):DC(D10) DC(C2):DG(D9) DC(C3):DG(D8) DA(C4):DT(D7) DA(C5):DT(D6) DT(C6):DA(D5) DT(C7):DA(D4) DG(C8):DC(D3) DG(C9):DC(D2) DC(C10):DG(D1) chainA ( 40) LYS45 0 0 0 0 0 0 0 0 0 2 ( 97) GLN102 0 0 0 0 4 0 0 0 0 0 (110) ARG115 0 7 17 13 0 0 0 0 0 0 (112) ASN117 0 0 7 10 7 0 0 0 0 0 (113) ALA118 0 0 0 0 5 6 0 0 0 0 (116) ARG121 0 0 0 0 0 10 4 0 0 0 prot.sequence lsgrlnwqalaglkasgaeqnlynvfnavfegtkyvlyeKpkhlknlyaqvvlpddvikeifnplidlsttqwgvspafaientethkilfgeikrQdgwvegkdpsagRgNAheRscklftpgllkayrtiggindeeilpfwvvfegditrdpkrvreitfwydhyqdnyfmwrpnesgeklvqhfneklkkyld >1d02_AB:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF MUNI RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNA organism=MYCOPLASMA DNA sequence DG(D1):DC(C10) DC(D2):DG(C9) DC(D3):DG(C8) DA(D4):DT(C7) DA(D5):DT(C6) DT(D6):DA(C5) DT(D7):DA(C4) DG(D8):DC(C3) DG(D9):DC(C2) DC(D10):DG(C1) chainA ( 40) LYS45 2 0 0 0 0 0 0 0 0 0 ( 97) GLN102 0 0 0 0 0 4 0 0 0 0 (110) ARG115 0 0 0 0 0 0 13 17 7 0 (112) ASN117 0 0 0 0 0 7 10 7 0 0 (113) ALA118 0 0 0 0 6 5 0 0 0 0 (116) ARG121 0 0 0 4 10 0 0 0 0 0 chainB (100) GLN102 0 0 0 0 4 0 0 0 0 0 (113) ARG115 0 7 17 12 0 0 0 0 0 0 (115) ASN117 0 0 7 10 7 0 0 0 0 0 (116) ALA118 0 0 0 0 5 6 0 0 0 0 (119) ARG121 0 0 0 0 0 10 5 0 0 0 prot.sequence lsgrlnwqalaglkasgaeqnlynvfnavfegtkyvlyeKpkhlknlyaqvvlpddvikeifnplidlsttqwgvspafaientethkilfgeikrQdgwvegkdpsagRgNAheRscklftpgllkayrtiggindeeilpfwvvfegditrdpkrvreitfwydhyqdnyfmwrpnesgeklvqhfneklkkyld/kselsgrlnwqalaglkasgaeqnlynvfnavfegtkyvlyeKpkhlknlyaqvvlpddvikeifnplidlsttqwgvspafaientethkilfgeikrQdgwvegkdpsagRgNAheRscklftpgllkayrtiggindeeilpfwvvfegditrdpkrvreitfwydhyqdnyfmwrpnesgeklvqhfneklkkyld >1d0e_A:DNA/RNA_polymerases; title=CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN organism=Moloney murine leukemia virus DNA sequence DC(F4):DG(E11) DA(F5):DT(E10) DT(F6):DA(E9) DG(F7):DC(E8) DC(F8):DG(E7) DA(F9):DT(E6) DT(F10):DA(E5) DG(F11):DC(E4) chainA ( 80) LEU99 0 0 0 0 0 0 0 9 ( 82) VAL101 0 0 0 0 0 0 0 1 ( 93) VAL112 0 0 0 0 0 0 0 5 ( 97) ARG116 0 0 0 0 0 0 9 10 prot.sequence gshmtwlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiqrlldqgilvpcqspwntplLpVkkpgtndyrpVqdlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >1d1u_A:DNA/RNA_polymerases; title=USE OF AN N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE TO FACILITATE CRYSTALLIZATION AND ANALYSIS OF A PSEUDO-16-MER DNA MOLECULE CONTAINING G-A MISPAIRS organism=Moloney murine leukemia virus DNA sequence DC(B1):DG(C16) DT(B2):DA(C15) DC(B3):DG(C14) DG(B4):DC(C13) DT(B5):DA(C12) DG(B6):DC(C11) chainA ( 41) TYR64 6 0 0 0 0 0 ( 76) LEU99 20 0 0 0 0 0 ( 91) ASP114 15 0 0 0 0 0 ( 93) ARG116 8 6 4 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >1d2i_A:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE BGLII COMPLEXED WITH DNA 16-MER organism=BACILLUS SUBTILIS DNA sequence DT(C3):DA(D32) DT(C4):DA(D31) DA(C5):DT(D30) DT(C6):DA(D29) DA(C7):DT(D28) DG(C8):DC(D27) DA(C9):DT(D26) DT(C10):DA(D25) DC(C11):DG(D24) DT(C12):DA(D23) DA(C13):DT(D22) DT(C14):DA(D21) DA(C15):DT(D20) DA(C16):DT(D19) chainA ( 39) GLN39 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 97) SER97 0 0 0 0 0 4 7 1 0 0 0 0 0 0 ( 98) ASN98 0 0 0 0 0 0 2 8 0 0 0 0 0 0 ( 99) TYR99 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (101) PHE101 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (139) SER139 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (140) ASN140 0 0 0 0 0 0 0 0 3 9 10 1 0 0 (141) SER141 0 0 0 0 0 0 0 0 4 7 7 0 0 0 (142) SER142 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (190) TYR190 0 0 0 0 0 9 3 1 0 0 0 0 0 0 prot.sequence mkiditdynhadeilnpqlwkeieetllkmplhvkasdQaskvgslifdpvgtnqyikdelvpkhwknnipipkrfdflgtdidfgkrdtlvevqfSNYpFllnntvrselfhksnmdideegmkvaiiitkghmfpaSNSSlyyeqaqnqlnslaeynvfdvpirlvgliedfetdidivsttyadkrYsRtitkrdtvkgkvidtntpntrrrkrgtivty >1d2i_AB:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE BGLII COMPLEXED WITH DNA 16-MER organism=BACILLUS SUBTILIS DNA sequence DT(D19):DA(C16) DT(D20):DA(C15) DA(D21):DT(C14) DT(D22):DA(C13) DA(D23):DT(C12) DG(D24):DC(C11) DA(D25):DT(C10) DT(D26):DA(C9) DC(D27):DG(C8) DT(D28):DA(C7) DA(D29):DT(C6) DT(D30):DA(C5) DA(D31):DT(C4) DA(D32):DT(C3) chainA ( 39) GLN39 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 97) SER97 0 0 0 0 0 0 1 7 4 0 0 0 0 0 ( 98) ASN98 0 0 0 0 0 0 8 2 0 0 0 0 0 0 ( 99) TYR99 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (101) PHE101 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (139) SER139 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (140) ASN140 0 0 1 10 9 3 0 0 0 0 0 0 0 0 (141) SER141 0 0 0 7 7 4 0 0 0 0 0 0 0 0 (142) SER142 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (190) TYR190 0 0 0 0 0 0 1 3 9 0 0 0 0 0 chainB ( 39) GLN39 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 97) SER97 0 0 0 0 0 4 7 1 0 0 0 0 0 0 ( 98) ASN98 0 0 0 0 0 0 2 8 0 0 0 0 0 0 ( 99) TYR99 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (101) PHE101 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (139) SER139 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (140) ASN140 0 0 0 0 0 0 0 0 3 9 8 0 0 0 (141) SER141 0 0 0 0 0 0 0 0 4 7 6 0 0 0 (142) SER142 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (190) TYR190 0 0 0 0 0 8 3 0 0 0 0 0 0 0 prot.sequence mkiditdynhadeilnpqlwkeieetllkmplhvkasdQaskvgslifdpvgtnqyikdelvpkhwknnipipkrfdflgtdidfgkrdtlvevqfSNYpFllnntvrselfhksnmdideegmkvaiiitkghmfpaSNSSlyyeqaqnqlnslaeynvfdvpirlvgliedfetdidivsttyadkrYsRtitkrdtvkgkvidtntpntrrrkrgtivty/mkiditdynhadeilnpqlwkeieetllkmplhvkasdQaskvgslifdpvgtnqyikdelvpkhwknnipipkrfdflgTdidfgkrdtlvevqfSNYpFllnntvrselfhksnmdideegmkvaiiitkghmfpaSNSSlyyeqaqnqlnslaeynvfdvpirlvgliedfetdidivsttyadkrYsrtitkrdtvkgkvidtntrkrgtivty >1d3u_A:TATA-box_binding_protein-like; title=TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/BRE+TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI organism=PYROCOCCUS WOESEI DNA sequence DA(C1401):DT(D1448) DG(C1402):DC(D1447) DA(C1403):DT(D1446) DG(C1404):DC(D1445) DT(C1405):DA(D1444) DA(C1406):DT(D1443) DA(C1407):DT(D1442) DA(C1408):DT(D1441) DG(C1409):DC(D1440) DT(C1410):DA(D1439) DT(C1411):DA(D1438) DT(C1412):DA(D1437) DA(C1413):DT(D1436) DA(C1414):DT(D1435) DA(C1415):DT(D1434) DT(C1416):DA(D1433) DA(C1417):DT(D1432) DC(C1418):DG(D1431) DT(C1419):DA(D1430) DT(C1420):DA(D1429) DA(C1421):DT(D1428) DT(C1422):DA(D1427) DA(C1423):DT(D1426) chainA ( 13) ASN13 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 ( 15) VAL15 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 ( 43) PHE43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 9 0 0 0 0 0 0 ( 44) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 58) LEU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 60) PHE60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 66) VAL66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 ( 68) THR68 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 (104) ASN104 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 (106) VAL106 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 (134) PHE134 0 0 0 0 0 0 0 0 0 5 13 0 0 0 0 0 0 0 0 0 0 0 0 (135) PRO135 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) LEU149 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 (151) PHE151 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (157) VAL157 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 (159) SER159 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 prot.sequence mvdmskvklrieNiVasvdlfaqldlekvldlcpnskynpeeFPgiichlddpkvalLiFssgklVvTgaksvqdieravaklaqklksigvkfkrapqidvqNmVfsgdigrefnldvvaltlpnceyepeqFPgviyrvkepksviLlFssgkiVcSgakseadaweavrkllreldky >1d3u_AB:TATA-box_binding_protein-like;Cyclin-like; title=TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/BRE+TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI organism=PYROCOCCUS WOESEI DNA sequence DA(C1401):DT(D1448) DG(C1402):DC(D1447) DA(C1403):DT(D1446) DG(C1404):DC(D1445) DT(C1405):DA(D1444) DA(C1406):DT(D1443) DA(C1407):DT(D1442) DA(C1408):DT(D1441) DG(C1409):DC(D1440) DT(C1410):DA(D1439) DT(C1411):DA(D1438) DT(C1412):DA(D1437) DA(C1413):DT(D1436) DA(C1414):DT(D1435) DA(C1415):DT(D1434) DT(C1416):DA(D1433) DA(C1417):DT(D1432) DC(C1418):DG(D1431) DT(C1419):DA(D1430) DT(C1420):DA(D1429) DA(C1421):DT(D1428) DT(C1422):DA(D1427) DA(C1423):DT(D1426) chainA ( 13) ASN13 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 ( 15) VAL15 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 ( 43) PHE43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 9 0 0 0 0 0 0 ( 44) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 58) LEU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 60) PHE60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 66) VAL66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 ( 68) THR68 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 (104) ASN104 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 (106) VAL106 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 (134) PHE134 0 0 0 0 0 0 0 0 0 5 13 0 0 0 0 0 0 0 0 0 0 0 0 (135) PRO135 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) LEU149 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 (151) PHE151 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (157) VAL157 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 (159) SER159 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 chainB (179) THR1278 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) VAL1280 0 0 0 1 4 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) THR1281 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ARG1283 0 0 15 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ASN1284 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mvdmskvklrieNiVasvdlfaqldlekvldlcpnskynpeeFPgiichlddpkvalLiFssgklVvTgaksvqdieravaklaqklksigvkfkrapqidvqNmVfsgdigrefnldvvaltlpnceyepeqFPgviyrvkepksviLlFssgkiVcSgakseadaweavrkllreldky/mvsdaaernlafalseldritaqlklprhveeeaarlyreavrkglirgrsiesvmaacvyaacrllkvprtldeiadiarvdkkeigrsyrfiarnlnltpkklfvkptdyvnkfadelglsekvrrraieildeaykrgltsgkspaglvaaalyiasllegekrtqrevaevarvTeVTvRNrykelveklkikvpia >1d5y_AB: title=CRYSTAL STRUCTURE OF THE E. COLI ROB TRANSCRIPTION FACTOR IN COMPLEX WITH DNA organism=Escherichia coli DNA sequence DC(N2):DG(M21) DT(N3):DA(M20) DT(N4):DA(M19) DT(N5):DA(M18) DG(N6):DC(M17) DA(N7):DT(M16) DC(N8):DG(M15) DA(N9):DT(M14) DT(N10):DA(M13) DT(N11):DA(M12) DC(N12):DG(M11) DA(N13):DT(M10) DG(N14):DC(M9) DT(N15):DA(M8) DG(N16):DC(M7) DC(N17):DG(M6) DT(N18):DA(M5) DG(N19):DC(M4) DT(N20):DA(M3) DC(N21):DG(M2) chainA ( 32) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 34) TRP36 0 0 0 0 0 0 0 0 0 0 0 0 2 10 27 6 0 0 0 0 ( 35) HIS37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 ( 37) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 ( 38) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 1 0 0 0 chainB ( 88) ARG90 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence qagiirdlliwleghldqplsldnvaakagySkWHlQRmfkdvtghaigayirarrlsksavalrltarpildialqyrfdsqqtftrafkkqfaqtpalyrrspewsafgirpplrlgeftmpehkfvtledtpligvtqsyscsleqisdfrhemryqfwhdflgnaptippvlyglnetrpsqdkddeqevfyttalaqdqadgyvltghpvmlqggeyvmftyeglgtgvqefiltvygtcmpmlnltrrkgqdieryypaeddrpinlrcellipirrklaaa/qagiirdlliwleghldqplsldnvaakagyskwhlqrmfkdvtghaigayirarrlsksavalrltarpildialqyrfdsqqtftRafkkqfaqtpalyrrspewsafgirpplrlgeftmpehkfvtledtpligvtqsyscsleqisdfrhemryqfwhdflgnaptippvlyglnetrpsqdkddeqevfyttalaqdqadgyvltghpvmlqggeyvmftyeglgtgvqefiltvygtcmpmlnltrrkgqdieryypaeddrpinlrcellipirrklaaa >1d5y_C:Probable_bacterial_effector-binding_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF THE E. COLI ROB TRANSCRIPTION FACTOR IN COMPLEX WITH DNA organism=Escherichia coli DNA sequence DG(O2):DC(P21) DA(O3):DT(P20) DC(O4):DG(P19) DA(O5):DT(P18) DG(O6):DC(P17) DC(O7):DG(P16) DA(O8):DT(P15) DC(O9):DG(P14) DT(O10):DA(P13) DG(O11):DC(P12) DA(O12):DT(P11) DA(O13):DT(P10) DT(O14):DA(P9) DG(O15):DC(P8) DT(O16):DA(P7) DC(O17):DG(P6) DA(O18):DT(P5) DA(O19):DT(P4) DA(O20):DT(P3) DG(O21):DC(P2) chainC ( 32) SER34 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) TRP36 0 0 0 0 9 20 9 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) HIS37 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN39 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG40 0 0 0 1 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qagiirdlliwleghldqplsldnvaakagySkWHlQRmfkdvtghaigayirarrlsksavalrltarpildialqyrfdsqqtftrafkkqfaqtpalyrrspewsafgirpplrlgeftmpehkfvtledtpligvtqsyscsleqisdfrhemryqfwhdflgnaptippvlyglnetrpsqdkddeqevfyttalaqdqadgyvltghpvmlqggeyvmftyeglgtgvqefiltvygtcmpmlnltrrkgqdieryypaeddrpinlrcellipirrklaaa >1d5y_CD: title=CRYSTAL STRUCTURE OF THE E. COLI ROB TRANSCRIPTION FACTOR IN COMPLEX WITH DNA organism=Escherichia coli DNA sequence DG(O2):DC(P21) DA(O3):DT(P20) DC(O4):DG(P19) DA(O5):DT(P18) DG(O6):DC(P17) DC(O7):DG(P16) DA(O8):DT(P15) DC(O9):DG(P14) DT(O10):DA(P13) DG(O11):DC(P12) DA(O12):DT(P11) DA(O13):DT(P10) DT(O14):DA(P9) DG(O15):DC(P8) DT(O16):DA(P7) DC(O17):DG(P6) DA(O18):DT(P5) DA(O19):DT(P4) DA(O20):DT(P3) DG(O21):DC(P2) chainD chainC ( 32) SER34 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) TRP36 0 0 0 0 9 20 9 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) HIS37 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN39 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG40 0 0 0 1 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qagiirdlliwleghldqplsldnvaakagySkWHlQRmfkdvtghaigayirarrlsksavalrltarpildialqyrfdsqqtftrafkkqfaqtpalyrrspewsafgirpplrlgeftmpehkfvtledtpligvtqsyscsleqisdfrhemryqfwhdflgnaptippvlyglnetrpsqdkddeqevfyttalaqdqadgyvltghpvmlqggeyvmftyeglgtgvqefiltvygtcmpmlnltrrkgqdieryypaeddrpinlrcellipirrklaaa/qagiirdlliwleghldqplsldnvaakagySkWHlQRmfkdvtghaigayirarrlsksavalrltarpildialqyrfdsqqtftrafkkqfaqtpalyrrspewsafgirpplrlgeftmpehkfvtledtpligvtqsyscsleqisdfrhemryqfwhdflgnaptippvlyglnetrpsqdkddeqevfyttalaqdqadgyvltghpvmlqggeyvmftyeglgtgvqefiltvygtcmpmlnltrrkgqdieryypaeddrpinlrcellipirrklaaa >1d66_AB:Zn2/Cys6_DNA-binding_domain; title=DNA RECOGNITION BY GAL4: STRUCTURE OF A PROTEIN/DNA COMPLEX organism=Saccharomyces cerevisiae DNA sequence DC(E20):DG(D19) DC(E21):DG(D18) DG(E22):DC(D17) DG(E23):DC(D16) DA(E24):DT(D15) DG(E25):DC(D14) DG(E26):DC(D13) DA(E27):DT(D12) DC(E28):DG(D11) DT(E29):DA(D10) DG(E30):DC(D9) DT(E31):DA(D8) DC(E32):DG(D7) DC(E33):DG(D6) DT(E34):DA(D5) DC(E35):DG(D4) DC(E36):DG(D3) DG(E37):DC(D2) DG(E38):DC(D1) chainA ( 8) ARG15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 11) LYS18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 15 11 0 ( 12) LEU19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainB ( 11) LYS18 0 21 14 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eqacdicRlkKLkcskekpkcakclknnwecryspktkrspltrahltevesrlerl/eqacdicrlkKlkcskekpkcakclknnwecryspktkrspltrahltevesrlerl >1d66_B:Zn2/Cys6_DNA-binding_domain; title=DNA RECOGNITION BY GAL4: STRUCTURE OF A PROTEIN/DNA COMPLEX organism=Saccharomyces cerevisiae DNA sequence DC(D1):DG(E38) DC(D2):DG(E37) DG(D3):DC(E36) DG(D4):DC(E35) DA(D5):DT(E34) DG(D6):DC(E33) DG(D7):DC(E32) DA(D8):DT(E31) DC(D9):DG(E30) DA(D10):DT(E29) DG(D11):DC(E28) DT(D12):DA(E27) DC(D13):DG(E26) DC(D14):DG(E25) DT(D15):DA(E24) DC(D16):DG(E23) DC(D17):DG(E22) DG(D18):DC(E21) DG(D19):DC(E20) chainB ( 11) LYS18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 14 21 0 prot.sequence eqacdicrlkKlkcskekpkcakclknnwecryspktkrspltrahltevesrlerl >1dc1_A:Restriction_endonuclease-like; title=RESTRICTION ENZYME BSOBI/DNA COMPLEX STRUCTURE: ENCIRCLEMENT OF THE DNA AND HISTIDINE-CATALYZED HYDROLYSIS WITHIN A CANONICAL RESTRICTION ENZYME FOLD organism=Geobacillus stearothermophilus DNA sequence DT(W2):DA(C12) DA(W3):DT(C11) DC(W4):DG(C10) DT(W5):DA(C9) DC(W6):DG(C8) DG(W7):DC(C7) DA(W8):DT(C6) DG(W9):DC(C5) DT(W10):DA(C4) DA(W11):DT(C3) DT(W12):DA(C2) chainA ( 77) LYS81 0 0 0 0 0 0 9 11 0 0 0 (127) ARG131 0 0 0 4 14 9 4 0 0 0 0 (128) ASN132 0 0 0 0 0 0 8 11 1 0 0 (233) ASP246 0 0 0 0 4 0 0 0 0 0 0 (235) ALA248 0 4 2 0 0 0 0 0 0 0 0 (239) GLU252 0 0 1 3 6 0 0 0 0 0 0 (240) HIS253 0 0 0 0 11 17 0 0 0 0 0 prot.sequence kpfenhlksvddlkttyeeyragfiafaleknkrstpyieraralkvaasvaktpkdllylediqdallyasgisdKakkflteddkkesinnlienflepageefidelifryllfqgdslggtmRNiagalaqqkltraiisaldianipykwldsrdkkytnwmdkpeddyeletfakgiswtingkhrtlmynitvslvkknvdiclfncepqqpekylllgelkggiDpAgadEHwktantaltrirnkfsekglspktifigaaiehsmaeeiwdqlqsgsltnsanltkteqvgslcrwiini >1dc1_AB:Restriction_endonuclease-like; title=RESTRICTION ENZYME BSOBI/DNA COMPLEX STRUCTURE: ENCIRCLEMENT OF THE DNA AND HISTIDINE-CATALYZED HYDROLYSIS WITHIN A CANONICAL RESTRICTION ENZYME FOLD organism=Geobacillus stearothermophilus DNA sequence DT(W2):DA(C12) DA(W3):DT(C11) DC(W4):DG(C10) DT(W5):DA(C9) DC(W6):DG(C8) DG(W7):DC(C7) DA(W8):DT(C6) DG(W9):DC(C5) DT(W10):DA(C4) DA(W11):DT(C3) DT(W12):DA(C2) chainA ( 77) LYS81 0 0 0 0 0 0 9 11 0 0 0 (127) ARG131 0 0 0 4 14 9 4 0 0 0 0 (128) ASN132 0 0 0 0 0 0 8 11 1 0 0 (233) ASP246 0 0 0 0 4 0 0 0 0 0 0 (235) ALA248 0 4 2 0 0 0 0 0 0 0 0 (239) GLU252 0 0 1 3 6 0 0 0 0 0 0 (240) HIS253 0 0 0 0 11 17 0 0 0 0 0 chainB ( 78) LYS81 0 0 11 9 0 0 0 0 0 0 0 (128) ARG131 0 0 0 4 8 10 4 0 0 0 0 (129) ASN132 0 1 11 8 0 0 0 0 0 0 0 (234) ASP246 0 0 0 0 0 4 0 0 0 0 0 (236) ALA248 0 0 0 0 0 0 0 2 4 0 0 (240) GLU252 0 0 0 0 0 6 4 1 0 0 0 (241) HIS253 0 0 0 0 21 11 0 0 0 0 0 prot.sequence kpfenhlksvddlkttyeeyragfiafaleknkrstpyieraralkvaasvaktpkdllylediqdallyasgisdKakkflteddkkesinnlienflepageefidelifryllfqgdslggtmRNiagalaqqkltraiisaldianipykwldsrdkkytnwmdkpeddyeletfakgiswtingkhrtlmynitvslvkknvdiclfncepqqpekylllgelkggiDpAgadEHwktantaltrirnkfsekglspktifigaaiehsmaeeiwdqlqsgsltnsanltkteqvgslcrwiini/qkpfenhlksvddlkttyeeyragfiafaleknkrstpyieraralkvaasvaktpkdllylediqdallyasgisdKakkflteddkkesinnlienflepageefidelifryllfqgdslggtmRNiagalaqqkltraiisaldianipykwldsrdkkytnwmdkpeddyeletfakgiswtingkhrtlmynitvslvkknvdiclfncepqqpekylllgelkggiDpAgadEHwktantaltrirnkfsekglspktifigaaiehsmaeeiwdqlqsgsltnsanltkteqvgslcrwiini >1dct_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=DNA (CYTOSINE-5) METHYLASE FROM HAEIII COVALENTLY BOUND TO DNA organism=HAEMOPHILUS INFLUENZAE BIOTYPE AEGYPTIUS DNA sequence DC(G3):DG(N17) DA(G4):DT(N16) DG(G5):DC(N15) DC(G6):DG(N14) DA(G7):DT(N13) DG(G8):DC(N12) DG(G9):5CM(N11) C49(G10):DG(N10) DC(G11):DG(N9) DA(G12):DT(N8) DC(G13):DG(N7) DC(G14):DG(N6) DA(G15):DT(N5) DG(G16):DC(N4) DT(G17):DA(N3) DG(G18):DC(N2) chainB ( 71) CYS71 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 ( 72) GLN72 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 0 4 16 0 0 0 0 0 0 0 0 0 (109) GLU109 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 (110) ASN110 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (111) VAL111 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (153) ARG153 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (155) ARG155 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 (219) SER219 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 (220) THR220 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (221) ILE221 0 0 0 0 0 0 22 23 3 0 0 0 0 0 0 0 (224) SER224 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 (225) ARG225 0 0 0 0 14 19 30 0 0 0 0 0 0 0 0 0 (227) ARG227 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 (239) GLN239 0 0 0 0 0 0 2 0 8 0 0 0 0 0 0 0 (243) ARG243 0 0 0 0 0 0 0 0 13 33 0 0 0 0 0 0 (244) GLN244 0 0 0 0 0 0 0 4 11 0 0 0 0 0 0 0 (260) ASN260 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 (306) ASN306 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 prot.sequence mnlislfsgaggldlgfqkagfriicaneydksiwktyesnhsaklikgdiskissdefpkcdgiiggppcqswsEggslrgiddprgklfyeyirilkqkkpifflaenvkgmmaqrhnkavqefiqefdnagydvhiillnandygvaqdrkrvfyigfrkelninylppiphlikptfkdviwdlkdnpipaldknktngnkciypnheyfigsySTIfmsRnRvrqwnepaftvQasgRQcqlhpqapvmlkvsknlnkfvegkehlyrrltvrecarvqgfpddfifhyeslndgykmignavpvnlayeiaktiksal >1ddn_ABCD:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain;C-terminal_domain_of_transcriptional_repressors; title=DIPHTHERIA TOX REPRESSOR (C102D MUTANT)/TOX DNA OPERATOR COMPLEX organism=Corynebacterium diphtheriae DNA sequence DT(F402):DA(E333) DA(F403):DT(E332) DA(F404):DT(E331) DA(F405):DT(E330) DA(F406):DT(E329) DT(F407):DA(E328) DA(F408):DT(E327) DA(F409):DT(E326) DT(F410):DA(E325) DT(F411):DA(E324) DA(F412):DT(E323) DG(F413):DC(E322) DG(F414):DC(E321) DT(F415):DA(E320) DA(F416):DT(E319) DA(F417):DT(E318) DA(F418):DT(E317) DG(F419):DC(E316) DC(F420):DG(E315) DT(F421):DA(E314) DA(F422):DT(E313) DT(F423):DA(E312) DC(F424):DG(E311) DC(F425):DG(E310) DT(F426):DA(E309) DA(F427):DT(E308) DA(F428):DT(E307) DT(F429):DA(E306) DT(F430):DA(E305) DA(F431):DT(E304) DT(F432):DA(E303) DA(F433):DT(E302) chainA ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainB ( 35) SER37 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 3 4 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 2 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 prot.sequence dlvdttemylrtiyeleeegvtplrariaerleqSgPTvsQtvaRmerdglvvvasdRslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeadrwehvmsdeverrlvkvl/dlvdttemylrtiyeleeegvtplrariaerleqSgPTvSQtvaRmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeadrwehvmsdeverrlvkvl/dlvdttemylrtiyeleeegvtplrariaerleqSgPTvsQtvaRmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeadrwehvmsdeverrlvkvl/dlvdttemylrtiyeleeegvtplrariaerleqSgPTvSQtvaRmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeadrwehvmsdeverrlvkvl >1ddn_B:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain; title=DIPHTHERIA TOX REPRESSOR (C102D MUTANT)/TOX DNA OPERATOR COMPLEX organism=Corynebacterium diphtheriae DNA sequence DT(F402):DA(E333) DA(F403):DT(E332) DA(F404):DT(E331) DA(F405):DT(E330) DA(F406):DT(E329) DT(F407):DA(E328) DA(F408):DT(E327) DA(F409):DT(E326) DT(F410):DA(E325) DT(F411):DA(E324) DA(F412):DT(E323) DG(F413):DC(E322) DG(F414):DC(E321) DT(F415):DA(E320) DA(F416):DT(E319) DA(F417):DT(E318) DA(F418):DT(E317) DG(F419):DC(E316) DC(F420):DG(E315) DT(F421):DA(E314) DA(F422):DT(E313) DT(F423):DA(E312) DC(F424):DG(E311) DC(F425):DG(E310) DT(F426):DA(E309) DA(F427):DT(E308) DA(F428):DT(E307) DT(F429):DA(E306) DT(F430):DA(E305) DA(F431):DT(E304) DT(F432):DA(E303) DA(F433):DT(E302) chainB ( 35) SER37 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 3 4 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dlvdttemylrtiyeleeegvtplrariaerleqSgPTvSQtvaRmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeadrwehvmsdeverrlvkvl >1de8_B:DNase_I-like; title=HUMAN APURINIC/APYRIMIDINIC ENDONUCLEASE-1 (APE1) BOUND TO ABASIC DNA organism=Homo sapiens DNA sequence DG(X1):DC(Y22) DC(X2):DG(Y21) DT(X3):DA(Y20) DA(X4):DT(Y19) DC(X5):DG(Y18) 3DR(X6):DG(Y17) DG(X7):DC(Y16) DA(X8):DT(Y15) DT(X9):DA(Y14) DC(X10):DG(Y13) DG(X11):DC(Y12) chainB (135) ARG177 0 0 0 0 2 0 26 0 0 0 0 (187) ASN229 0 0 0 0 0 0 2 0 0 0 0 (227) TYR269 0 0 0 0 6 0 0 0 0 0 0 (228) MET270 0 0 0 0 26 0 3 0 0 0 0 (229) MET271 0 0 0 0 0 0 2 1 0 0 0 (266) ASP308 0 0 0 0 2 0 0 0 0 0 0 prot.sequence alyedppdhktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqetkcsenklpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMMnarsknvgwrldyfllshsllpalcdskirskalgsDhcpitlylal >1dew_B:DNase_I-like; title=CRYSTAL STRUCTURE OF HUMAN APE1 BOUND TO ABASIC DNA organism=Homo sapiens DNA sequence DG(X1):DC(Y30) DC(X2):DG(Y29) DG(X3):DC(Y28) DT(X4):DA(Y27) DC(X5):DG(Y26) DC(X6):DG(Y25) 3DR(X7):DG(Y24) DC(X8):DG(Y23) DG(X9):DC(Y22) DA(X10):DT(Y21) DC(X11):DG(Y20) DG(X12):DC(Y19) DA(X13):DT(Y18) DC(X14):DG(Y17) chainB ( 59) LYS98 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (138) ARG177 0 0 0 0 0 8 2 7 0 0 0 0 0 0 (190) ASN229 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (230) TYR269 0 0 0 0 0 12 0 0 0 0 0 0 0 0 (231) MET270 0 0 0 0 0 12 1 4 0 0 0 0 0 0 (232) MET271 0 0 0 0 0 0 0 4 4 0 0 0 0 0 prot.sequence egpalyedppdhktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMMnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >1dfm_A:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE BGLII COMPLEXED WITH DNA 16-MER organism=Bacillus subtilis DNA sequence DT(C3):DA(D32) DT(C4):DA(D31) DA(C5):DT(D30) DT(C6):DA(D29) DA(C7):DT(D28) DG(C8):DC(D27) DA(C9):DT(D26) DT(C10):DA(D25) DC(C11):DG(D24) DT(C12):DA(D23) DA(C13):DT(D22) DT(C14):DA(D21) DA(C15):DT(D20) DA(C16):DT(D19) chainA ( 39) GLN39 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 97) SER97 0 0 0 0 0 4 7 1 0 0 0 0 0 0 ( 98) ASN98 0 0 0 0 0 0 2 8 0 0 0 0 0 0 ( 99) TYR99 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (101) PHE101 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (139) SER139 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (140) ASN140 0 0 0 0 0 0 0 0 3 9 8 0 0 0 (141) SER141 0 0 0 0 0 0 0 0 4 7 7 0 0 0 (142) SER142 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (190) TYR190 0 0 0 0 0 8 3 0 0 0 0 0 0 0 prot.sequence mkiditdynhadeilnpqlwkeieetllkmplhvkasdQaskvgslifdpvgtnqyikdelvpkhwknnipipkrfdflgtdidfgkrdtlvevqfSNYpFllnntvrselfhksnmdideegmkvaiiitkghmfpaSNSSlyyeqaqnqlnslaeynvfdvpirlvgliedfetdidivsttyadkrYsRtitkrdtvkgkvidtntpntrrrkrgtivty >1dfm_AB:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE BGLII COMPLEXED WITH DNA 16-MER organism=Bacillus subtilis DNA sequence DT(D19):DA(C16) DT(D20):DA(C15) DA(D21):DT(C14) DT(D22):DA(C13) DA(D23):DT(C12) DG(D24):DC(C11) DA(D25):DT(C10) DT(D26):DA(C9) DC(D27):DG(C8) DT(D28):DA(C7) DA(D29):DT(C6) DT(D30):DA(C5) DA(D31):DT(C4) DA(D32):DT(C3) chainA ( 39) GLN39 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 97) SER97 0 0 0 0 0 0 1 7 4 0 0 0 0 0 ( 98) ASN98 0 0 0 0 0 0 8 2 0 0 0 0 0 0 ( 99) TYR99 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (101) PHE101 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (139) SER139 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (140) ASN140 0 0 0 8 9 3 0 0 0 0 0 0 0 0 (141) SER141 0 0 0 7 7 4 0 0 0 0 0 0 0 0 (142) SER142 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (190) TYR190 0 0 0 0 0 0 0 3 8 0 0 0 0 0 chainB ( 39) GLN39 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 97) SER97 0 0 0 0 0 4 7 1 0 0 0 0 0 0 ( 98) ASN98 0 0 0 0 0 0 2 8 0 0 0 0 0 0 ( 99) TYR99 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (101) PHE101 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (139) SER139 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (140) ASN140 0 0 0 0 0 0 0 0 3 9 8 0 0 0 (141) SER141 0 0 0 0 0 0 0 0 3 7 5 0 0 0 (142) SER142 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (190) TYR190 0 0 0 0 0 9 3 0 0 0 0 0 0 0 prot.sequence mkiditdynhadeilnpqlwkeieetllkmplhvkasdQaskvgslifdpvgtnqyikdelvpkhwknnipipkrfdflgtdidfgkrdtlvevqfSNYpFllnntvrselfhksnmdideegmkvaiiitkghmfpaSNSSlyyeqaqnqlnslaeynvfdvpirlvgliedfetdidivsttyadkrYsRtitkrdtvkgkvidtntpntrrrkrgtivty/mkiditdynhadeilnpqlwkeieetllkmplhvkasdQaskvgslifdpvgtnqyikdelvpkhwknnipipkrfdflgTdidfgkrdtlvevqfSNYpFllnntvrselfhksnmdideegmkvaiiitkghmfpaSNSSlyyeqaqnqlnslaeynvfdvpirlvgliedfetdidivsttyadkrYsrtitkrdtvkgkvidtntrkrgtivty >1dgc_A:Leucine_zipper_domain; title=THE X-RAY STRUCTURE OF THE GCN4-BZIP BOUND TO ATF/CREB SITE DNA SHOWS THE COMPLEX DEPENDS ON DNA FLEXIBILITY organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(B-10) DG(B-9) DG(B-8) DA(B-7) DG(B-6) DA(B-5) DT(B-4) DG(B-3) DA(B-2) DC(B-1) DG(B1) DT(B2) DC(B3) DA(B4) DT(B5) DC(B6) DT(B7) DC(B8) DC(B9) chainA ( 9) ASN235 0 0 0 0 0 0 0 0 0 0 0 3 5 2 0 0 0 0 0 ( 10) THR236 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 13) ALA239 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 17) ARG243 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 prot.sequence paalkrarNTeaArrsRarklqrmkqledkveellsknyhlenevarlkklvger >1dh3_AC:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF A CREB BZIP-CRE COMPLEX REVEALS THE BASIS FOR CREB FAIMLY SELECTIVE DIMERIZATION AND DNA BINDING organism=Mus musculus DNA sequence DC(D-10):DG(B10) DT(D-9):DA(B9) DT(D-8):DA(B8) DG(D-7):DC(B7) DG(D-6):DC(B6) DC(D-5):DG(B5) DT(D-4):DA(B4) DG(D-3):DC(B3) DA(D-2):DT(B2) DC(D-1):DG(B1) DG(D1):DC(B-1) DT(D2):DA(B-2) DC(D3):DG(B-3) DA(D4):DT(B-4) DG(D5):DC(B-5) DC(D6):DG(B-6) DC(D7):DG(B-7) DA(D8):DT(B-8) DA(D9):DT(B-9) DG(D10):DC(B-10) chainA ( 9) ASN293 0 0 0 0 0 0 2 9 3 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG294 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 12) ALA296 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ALA297 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER300 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG301 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 chainC ( 9) ASN293 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 ( 12) ALA296 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 13) ALA297 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 ( 16) SER300 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 17) ARG301 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 prot.sequence krevrlmkNReAAreSRrkkkeyvkslenrvavlenqnktlieelkalkdlyshk/krevrlmkNreAAreSRrkkkeyvkslenrvavlenqnktlieelkalkdlyshk >1dh3_C:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF A CREB BZIP-CRE COMPLEX REVEALS THE BASIS FOR CREB FAIMLY SELECTIVE DIMERIZATION AND DNA BINDING organism=Mus musculus DNA sequence DC(B-10):DG(D10) DT(B-9):DA(D9) DT(B-8):DA(D8) DG(B-7):DC(D7) DG(B-6):DC(D6) DC(B-5):DG(D5) DT(B-4):DA(D4) DG(B-3):DC(D3) DA(B-2):DT(D2) DC(B-1):DG(D1) DG(B1):DC(D-1) DT(B2):DA(D-2) DC(B3):DG(D-3) DA(B4):DT(D-4) DG(B5):DC(D-5) DC(B6):DG(D-6) DC(B7):DG(D-7) DA(B8):DT(D-8) DA(B9):DT(D-9) DG(B10):DC(D-10) chainC ( 9) ASN293 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ALA296 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ALA297 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER300 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG301 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 prot.sequence krevrlmkNreAAreSRrkkkeyvkslenrvavlenqnktlieelkalkdlyshk >1diz_B:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF E. COLI 3-METHYLADENINE DNA GLYCOSYLASE (ALKA) COMPLEXED WITH DNA organism=Escherichia coli DNA sequence DG(D14):DC(C12) DG(D15):DC(C11) DC(D16):DG(C10) DA(D17):DT(C9) DA(D18):NRI(C8) DT(D19):DA(C7) DC(D20):DG(C6) DA(D21):DT(C5) DT(D22):DA(C4) DG(D23):DC(C3) DT(D24):DA(C2) DC(D25):DG(C1) chainB (125) LEU125 0 0 0 12 6 24 0 0 0 0 0 0 (126) VAL126 0 0 0 0 0 2 0 0 0 0 0 0 (178) ARG178 0 0 0 2 0 0 0 0 0 0 0 0 (239) TYR239 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLVsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkRaealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddYlikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >1dmu_A:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF THE RESTRICTION ENDONUCLEASE BGLI (E.C.3.1.21.4) BOUND TO ITS DNA RECOGNITION SEQUENCE organism=Bacillus subtilis DNA sequence DA(F-8) DT(F-7) DC(F-6) DG(F-5) DC(F-4) DC(F-3) DT(F-2) DA(F-1) DA(F0) DT(F1) DA(F2) DG(F3) DG(F4) DC(F5) DG(F6) DA(F7) DT(F8) chainA ( 73) LYS73 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (150) ASP150 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 (266) LYS266 0 0 0 0 0 0 0 0 0 0 0 14 12 2 0 0 0 (271) LYS271 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (277) ARG277 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 prot.sequence mynlhrekifmsynqnkqylednpeiqekielyglnllnevisdneeeiradyneanflhpfwmnyppldRgKmpkgdqipwievgekavgskltrlvsqreditvreiglptgpderylltsptiysltngftdsimmfvdiksvgprDsdydlvlspnqvsgngdwaqleggiqnnqqtiqgprssqiflptipplyilsdgtiapvvhlfikpiyamrsltkgdtgqslykiklasvpnglglfcnpgyafdsaykflfrpgKDdrtKsllqkRvrvdlrvldkigprvmtidmdk >1dnk_A:DNase_I-like; title=THE X-RAY STRUCTURE OF THE DNASE I-D(GGTATACC)2 COMPLEX AT 2.3 ANGSTROMS RESOLUTION organism=BOS TAURUS DNA sequence DG(C310):DC(B307) DT(C311):DA(B306) DA(C312):DT(B305) DT(C313):DA(B304) DA(C314):DT(B303) DC(C315):DG(B302) DC(C316):DG(B301) chainA ( 41) ARG41 0 3 8 0 0 0 0 ( 75) SER75 0 1 0 0 0 0 0 ( 76) TYR76 0 0 1 2 0 0 0 (165) TYR175 0 0 0 0 0 1 1 prot.sequence lkiaafnirtfgetkmsnatlasyivrivrrydivliqevRdshlvavgklldylnqddpntyhyvvseplgrnSYkerylflfrpnkvsvldtyqysfsrepavvkfsshstkvkefaivalhsapsdavaeinslydvyldvqqkwhlndvmlmgdfnadcsYvtssqwssirlrtsstfqwlipdsadttatstncaydrivvagsllqssvvpgsaapfdfqaayglsnemalaisdhypvevtlt >1dp7_P:"Winged_helix"_DNA-binding_domain; title=COCRYSTAL STRUCTURE OF RFX-DBD IN COMPLEX WITH ITS COGNATE X-BOX BINDING SITE organism=? DNA sequence DC(D1) DG(D2) DT(D4) DA(D5) DC(D6) DC(D7) DA(D8) DG(D10) DG(D11) DT(D12) DA(D13) DA(D14) DC(D15) DG(D16) chainP ( 41) ALA41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 45) LYS45 0 0 0 2 6 0 0 0 0 0 0 0 0 0 ( 58) ARG58 0 0 0 0 0 0 0 11 12 0 0 0 0 0 ( 62) ARG62 0 0 0 0 0 0 0 0 0 0 0 4 1 0 ( 67) TYR67 0 0 0 0 0 0 0 9 0 0 0 0 0 0 prot.sequence tvqwlldnyetaegvslprstlynhyllhsqeqklepvnaAsfgKlirsvfmglrtrRlgtRgnskYhyyglrika >1drg_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF TRIMERIC CRE RECOMBINASE-LOX COMPLEX organism=Enterobacteria phage P1 DNA sequence DA(B2):DT(C19) DT(B3):DA(C18) DA(B4):DT(C17) DA(B5):DT(C16) DC(B6):DG(C15) DT(B7):DA(C14) DT(B8):DA(C13) DC(B9):DG(C12) DG(B10):DC(C11) DT(B11):DA(C10) DA(B12):DT(C9) DT(B13):DA(C8) DA(B14):DT(C7) DG(B15):DC(C6) DC(B16):DG(C5) chainA ( 20) HIS40 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 ( 21) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 23) LYS43 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 ( 24) MET44 0 0 0 0 0 0 0 0 0 2 4 7 0 0 0 ( 27) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 66) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 11 10 1 ( 67) THR87 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 ( 70) GLN90 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 ( 74) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (211) ARG241 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (213) ARG243 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 (214) LYS244 8 14 2 0 0 0 0 0 0 0 0 0 0 0 0 (227) SER257 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 (229) ARG259 0 0 0 0 0 0 12 19 14 0 0 0 0 0 0 (232) GLU262 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 (252) ARG282 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 (290) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence devrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnIvmnfirnldsetgamvrlledgd >1dsz_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE OF THE RXR/RAR DNA-BINDING DOMAIN HETERODIMER IN COMPLEX WITH THE RETINOIC ACID RESPONSE ELEMENT DR1 organism=HOMO SAPIENS DNA sequence DC(D1531):DG(C1509) DT(D1532):DA(C1508) DG(D1533):DC(C1507) DA(D1534):DT(C1506) DC(D1535):DG(C1505) DC(D1536):DG(C1504) DT(D1537):DA(C1503) DT(D1538):DA(C1502) DT(D1539):DA(C1501) DG(D1540):DC(C1500) DA(D1541):DT(C1499) DC(D1542):DG(C1498) DC(D1543):DG(C1497) DT(D1544):DA(C1496) DG(D1545):DC(C1495) chainA ( 20) GLU1153 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 ( 23) LYS1156 0 0 0 0 0 0 0 0 0 0 0 2 9 2 0 ( 27) ARG1160 0 0 0 0 0 0 0 0 0 0 2 3 3 0 0 ( 28) ARG1161 0 0 0 0 0 0 0 0 13 7 0 0 0 0 0 prot.sequence pcfvcqdkssgyhygvsacEgcKgffRRsiqknmvytchrdknciinkvtrnrcqycrlqkcfevgmskesvrnd >1dsz_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE OF THE RXR/RAR DNA-BINDING DOMAIN HETERODIMER IN COMPLEX WITH THE RETINOIC ACID RESPONSE ELEMENT DR1 organism=HOMO SAPIENS DNA sequence DC(C1495):DG(D1545) DA(C1496):DT(D1544) DG(C1497):DC(D1543) DG(C1498):DC(D1542) DT(C1499):DA(D1541) DC(C1500):DG(D1540) DA(C1501):DT(D1539) DA(C1502):DT(D1538) DA(C1503):DT(D1537) DG(C1504):DC(D1536) DG(C1505):DC(D1535) DT(C1506):DA(D1534) DC(C1507):DG(D1533) DA(C1508):DT(D1532) DG(C1509):DC(D1531) chainA ( 20) GLU1153 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 ( 23) LYS1156 0 2 9 2 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG1160 0 0 3 3 2 0 0 0 0 0 0 0 0 0 0 ( 28) ARG1161 0 0 0 0 0 7 13 0 0 0 0 0 0 0 0 chainB ( 26) GLU1253 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 ( 29) LYS1256 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 ( 33) LYS1260 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 34) ARG1261 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 prot.sequence pcfvcqdkssgyhygvsacEgcKgffRRsiqknmvytchrdknciinkvtrnrcqycrlqkcfevgmskesvrnd/gsftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeRqr >1du0_A:Homeodomain-like; title=ENGRAILED HOMEODOMAIN Q50A VARIANT DNA COMPLEX organism=Drosophila melanogaster DNA sequence DT(C202):DA(D321) DT(C203):DA(D320) DT(C204):DA(D319) DG(C205):DC(D318) DC(C206):DG(D317) DC(C207):DG(D316) DA(C208):DT(D315) DT(C209):DA(D314) DG(C210):DC(D313) DT(C211):DA(D312) DA(C212):DT(D311) DA(C213):DT(D310) DT(C214):DA(D309) DT(C215):DA(D308) DA(C216):DT(D307) DC(C217):DG(D306) DC(C218):DG(D305) DT(C219):DA(D304) DA(C220):DT(D303) DA(C221):DT(D302) chainA ( 41) ILE47 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 44) ALA50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 45) ASN51 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 ( 49) LYS55 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence afsseqlarlkrefnenrylterrrqqlsselglneaqikIwfANkraKikks >1du0_AB:Homeodomain-like; title=ENGRAILED HOMEODOMAIN Q50A VARIANT DNA COMPLEX organism=Drosophila melanogaster DNA sequence DT(C202):DA(D321) DT(C203):DA(D320) DT(C204):DA(D319) DG(C205):DC(D318) DC(C206):DG(D317) DC(C207):DG(D316) DA(C208):DT(D315) DT(C209):DA(D314) DG(C210):DC(D313) DT(C211):DA(D312) DA(C212):DT(D311) DA(C213):DT(D310) DT(C214):DA(D309) DT(C215):DA(D308) DA(C216):DT(D307) DC(C217):DG(D306) DC(C218):DG(D305) DT(C219):DA(D304) DA(C220):DT(D303) DA(C221):DT(D302) chainA ( 41) ILE47 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 44) ALA50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 45) ASN51 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 ( 49) LYS55 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainB ( 45) ILE147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 48) ALA150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 51) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence afsseqlarlkrefnenrylterrrqqlsselglneaqikIwfANkraKikks/rprtafsseqlarlkrefnenrylterrrqqlsselglneaqikIwfANkRakikk >1dux_F:"Winged_helix"_DNA-binding_domain; title=ELK-1/DNA STRUCTURE REVEALS HOW RESIDUES DISTAL FROM DNA-BINDING SURFACE AFFECT DNA-RECOGNITION organism=Homo sapiens DNA sequence DA(E1):DT(D13) DC(E2):DG(D12) DA(E3):DT(D11) DC(E4):DG(D10) DT(E5):DA(D9) DT(E6):DA(D8) DC(E7):DG(D7) DC(E8):DG(D6) DG(E9):DC(D5) DG(E10):DC(D4) DT(E11):DA(D3) DC(E12):DG(D2) DA(E13):DT(D1) chainF ( 54) ASP58 0 0 0 0 0 0 1 8 1 0 0 0 0 ( 55) LYS59 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 58) ARG62 0 0 0 0 1 10 16 21 0 0 0 0 0 ( 61) ARG65 0 0 0 0 0 0 0 13 16 0 0 0 0 ( 62) TYR66 0 0 3 7 0 0 0 0 0 0 0 0 0 prot.sequence vtlwqfllqllreqgnghiiswtsrdggefklvdaeevarlwglrknktnmnyDKlSRalRYyydkniirkvsgqkfvykfvsype >1e3m_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH A G:T MISMATCH organism=ESCHERICHIA COLI DNA sequence DA(F14):DT(E17) DC(F15):DG(E16) DT(F16):DA(E15) DG(F17):DC(E14) DG(F18):DC(E13) DT(F19):DA(E12) DG(F20):DC(E11) DC(F21):DG(E10) DT(F22):DG(E9) DT(F23):DA(E8) DG(F24):DC(E7) DG(F25):DC(E6) DC(F26):DG(E5) DA(F27):DT(E4) DG(F28):DC(E3) DC(F29):DG(E2) DT(F30):DA(E1) chainA ( 32) MET33 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 0 49 17 0 0 0 0 0 0 0 ( 37) GLU38 0 0 0 0 0 0 0 5 13 0 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 1 8 3 0 0 0 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 chainB prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgDFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/mqqylrlkaqhpeillfyrmgdfyelfyddaKrASqLldisltpmagipyhavenyLaklvnqgesVaicErkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgtfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >1e3o_C:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=CRYSTAL STRUCTURE OF OCT-1 POU DIMER BOUND TO MORE organism=Homo sapiens DNA sequence DT(B201):DA(A211) DC(B202):DG(A210) DC(B203):DG(A209) DT(B204):DA(A208) DC(B205):DG(A207) DA(B206):DT(A206) DT(B207):DA(A205) DG(B208):DC(A204) DC(B209):DG(A203) DA(B210):DT(A202) DT(B211):DA(A201) chainC ( 43) SER43 0 0 0 0 0 0 0 1 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 2 10 ( 45) THR45 0 0 0 0 0 0 0 3 6 12 0 ( 48) SER48 0 0 0 0 0 0 0 0 0 2 3 ( 49) ARG49 0 0 0 0 0 0 7 16 2 0 0 ( 55) LEU55 0 0 0 0 0 0 1 0 0 0 0 ( 59) ASN59 0 0 0 0 0 0 1 0 0 0 0 (118) ARG146 0 0 0 1 0 0 0 0 0 0 0 (119) VAL147 0 0 0 0 0 2 2 0 0 0 0 (122) SER150 0 0 0 1 1 0 0 0 0 0 0 (123) ASN151 0 0 0 0 0 0 10 9 0 0 0 (126) GLN154 0 0 0 0 12 6 2 0 0 0 0 prot.sequence eepsdleeleqfaktfkqrriklgftqgdvglamgklygndfSQTtiSRfealnLsfkNmsklkpllekwlndaekrtsietnirvaleksfmenqkptseditliaeqlnmekeviRVwfSNrrQkekRin >1e7j_A:HMG-box; title=HMG-D COMPLEXED TO A BULGE DNA organism=DROSOPHILA MELANOGASTER DNA sequence DC(B1):DG(C26) DG(B2):DC(C25) DA(B3):DT(C24) DT(B4):DA(C23) DA(B5):DT(C22) DT(B6):DA(C21) DT(B7):DA(C20) DA(B8):DC(C19) DA(B9):DT(C18) DG(B10):DC(C17) DA(B11):DG(C16) DG(B12):DG(C15) chainA ( 10) SER10 0 0 1 1 0 0 0 0 0 0 0 0 ( 12) TYR12 0 0 0 1 0 0 0 0 0 0 0 0 ( 13) MET13 0 0 0 2 11 0 0 0 0 0 0 0 ( 32) VAL32 0 0 0 0 0 1 0 0 0 0 0 0 ( 33) THR33 0 0 0 0 0 2 0 0 0 0 0 0 ( 36) ALA36 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence msdkpkrplSaYMlwlnsaresikrenpgikVTevAkrggelwramkdkseweakaakakddydravkefeang >1ea4_DEFG:Ribbon-helix-helix; title=TRANSCRIPTIONAL REPRESSOR COPG/22BP DSDNA COMPLEX organism=STREPTOCOCCUS AGALACTIAE DNA sequence DG(X202):DC(W222) DA(X203):DT(W221) DT(X204):DA(W220) DT(X205):DA(W219) DG(X206):DC(W218) DC(X207):DG(W217) DA(X208):DT(W216) DT(X209):DA(W215) DT(X210):DA(W214) DG(X211):DC(W213) DA(X212):DT(W212) DG(X213):DC(W211) DT(X214):DA(W210) DG(X215):DC(W209) DC(X216):DG(W208) DA(X217):DT(W207) DC(X218):DG(W206) DG(X219):DC(W205) DG(X220):DC(W204) DT(X221):DA(W203) chainD ( 4) ARG4 0 0 0 1 5 5 16 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) THR6 0 0 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG4 1 6 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) THR6 0 0 0 0 3 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) THR8 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 4) ARG4 0 0 0 0 0 0 0 0 0 0 0 0 14 6 10 0 0 0 0 0 ( 6) THR6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 chainG ( 4) ARG4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 13 0 0 ( 6) THR6 0 0 0 0 0 0 0 0 0 0 0 0 6 5 5 0 0 0 0 0 ( 8) THR8 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 prot.sequence mkkRlTitlsesvlenlekmaremglsksamisvalenykkgq/mkkRlTiTlsesvlenlekmaremglsksamisvalenykkgqe/mkkRlTitlsesvlenlekmaremglsksamisvalenykkgqek/mkkRlTiTlsesvlenlekmaremglsksamisvalenykkg >1ea4_H:Ribbon-helix-helix; title=TRANSCRIPTIONAL REPRESSOR COPG/22BP DSDNA COMPLEX organism=STREPTOCOCCUS AGALACTIAE DNA sequence DT(V204):DA(U220) DT(V205):DA(U219) DG(V206):DC(U218) DC(V207):DG(U217) DA(V208):DT(U216) DT(V209):DA(U215) DT(V210):DA(U214) DG(V211):DC(U213) DA(V212):DT(U212) DG(V213):DC(U211) DT(V214):DA(U210) DG(V215):DC(U209) DC(V216):DG(U208) DA(V217):DT(U207) DC(V218):DG(U206) DG(V219):DC(U205) DG(V220):DC(U204) chainH ( 3) ARG4 0 0 0 0 0 0 0 0 0 0 16 6 12 0 0 0 0 ( 5) THR6 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 prot.sequence kkRlTitlsesvlenlekmaremglsksamisvalenykkgqek >1ea4_HKL:Ribbon-helix-helix; title=TRANSCRIPTIONAL REPRESSOR COPG/22BP DSDNA COMPLEX organism=STREPTOCOCCUS AGALACTIAE DNA sequence DT(V204):DA(U220) DT(V205):DA(U219) DG(V206):DC(U218) DC(V207):DG(U217) DA(V208):DT(U216) DT(V209):DA(U215) DT(V210):DA(U214) DG(V211):DC(U213) DA(V212):DT(U212) DG(V213):DC(U211) DT(V214):DA(U210) DG(V215):DC(U209) DC(V216):DG(U208) DA(V217):DT(U207) DC(V218):DG(U206) DG(V219):DC(U205) DG(V220):DC(U204) chainH ( 3) ARG4 0 0 0 0 0 0 0 0 0 0 16 6 12 0 0 0 0 ( 5) THR6 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 chainK ( 4) ARG4 0 0 6 6 13 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) THR6 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 4) ARG4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) THR6 0 0 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) THR8 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkRlTitlsesvlenlekmaremglsksamisvalenykkgqek/mkkRlTitlsesvlenlekmaremglsksamisvalenykkgq/mkkRlTiTlsesvlenlekmaremglsksamisvalenykkgqe >1ebm_A:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE HUMAN 8-OXOGUANINE GLYCOSYLASE (HOGG1) BOUND TO A SUBSTRATE OLIGONUCLEOTIDE organism=Homo sapiens DNA sequence DG(D2):DC(C32) DG(D3):DC(C31) DT(D4):DA(C30) DA(D5):DT(C29) DG(D6):DC(C28) DA(D7):DT(C27) DC(D8):DG(C26) DC(D9):8OG(C25) DT(D10):DA(C24) DG(D11):DC(C23) DG(D12):DC(C22) DA(D13):DT(C21) DC(D14):DG(C20) DG(D15):DC(C19) DC(D16):DG(C18) chainA ( 37) PHE45 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (133) PHE144 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (136) SER147 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (138) ASN149 0 0 0 0 0 0 62 5 5 0 0 0 0 0 0 (140) ASN151 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 (141) ILE152 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (143) ARG154 0 0 0 0 0 0 0 10 10 0 0 0 0 0 0 (144) ILE155 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (192) TYR203 0 0 0 0 0 0 14 16 0 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (196) TYR207 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (238) GLN249 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (246) MET257 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (255) PRO266 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (257) ASP268 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 (260) MET271 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (304) GLN315 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (308) PHE319 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficsSNnNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtqvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwgpyagwaqavlfsadlrq >1ecr_A:Replication_terminator_protein_Tus; title=ESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN (TUS) COMPLEXED WITH DNA organism=Escherichia coli DNA sequence DA(C328):DT(B325) DG(C329):DC(B324) DT(C330):DA(B323) DA(C331):DT(B322) DT(C332):DA(B321) DG(C333):DC(B320) DT(C334):DA(B319) DT(C335):DA(B318) DG(C336):DC(B317) DT(C337):DA(B316) DA(C338):DT(B315) DA(C339):DT(B314) DC(C340):DG(B313) DT(C341):DA(B312) chainA ( 85) LYS89 0 0 0 9 4 1 0 0 0 0 0 0 0 0 ( 89) ARG93 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (132) THR136 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (149) LEU153 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (169) ALA173 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (171) LYS175 0 0 0 0 0 0 0 0 3 9 9 1 0 0 (173) ILE177 0 0 0 0 0 1 7 3 0 0 0 0 0 0 (174) ILE178 0 0 0 0 0 0 0 0 7 1 0 0 0 0 (194) ARG198 10 7 0 0 0 0 0 0 0 0 0 0 0 0 (228) ARG232 0 0 0 0 25 8 0 0 0 0 0 0 0 0 (230) VAL234 0 0 0 0 0 0 7 4 0 0 0 0 0 0 (233) GLN237 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (235) ILE239 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (237) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 4 5 (246) GLN250 0 0 0 0 0 0 0 0 0 0 0 0 5 9 (248) GLN252 0 0 0 0 0 0 0 0 0 1 5 3 2 0 (250) ALA254 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (284) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 2 5 (286) LYS290 0 0 0 0 0 0 0 0 0 0 0 6 6 3 prot.sequence dlvdrlnttfrqmeqelaifaahleqhkllvarvfslpevkkedehnplnrievkqhlgndaqslalrhfrhlfiqqqsenrssKaavRlpgvlcyqvdnlsqaalvshiqhinklkttfehivtveselpTaarfewvhrhlpglitLnayrtltvlhdpatlrfgwAnKhIIknlhrdevlaqlekslkspRsvapwtreewqrklereyqdiaalpqnaklkikRpVkvQpIaRvwykgdqkQvQhAcptplialinrdngagvpdvgellnydadnvqhRyKpqaqplrliiprlhlyvad >1efa_AB:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE LAC REPRESSOR DIMER BOUND TO OPERATOR AND THE ANTI-INDUCER ONPF organism=Escherichia coli DNA sequence DT(D5):DA(E18) DG(D6):DC(E17) DT(D7):DA(E16) DG(D8):DC(E15) DA(D9):DT(E14) DG(D10):DC(E13) DC(D11):DG(E12) DG(D12):DC(E11) DC(D13):DG(E10) DT(D14):DA(E9) DC(D15):DG(E8) DA(D16):DT(E7) DC(D17):DG(E6) DA(D18):DT(E5) DA(D19):DT(E4) DT(D20):DA(E3) DT(D21):DA(E2) chainA ( 5) LEU6 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 ( 15) SER16 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) TYR17 0 0 12 8 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) GLN18 0 3 7 7 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER21 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG22 14 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA53 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 3 3 3 0 0 0 0 0 0 0 0 0 0 chainB ( 5) LEU6 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 15) SER16 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 16) TYR17 0 0 0 0 0 0 0 0 0 3 7 16 0 0 0 0 0 ( 17) GLN18 0 0 0 0 0 0 0 0 0 1 9 9 7 0 0 0 0 ( 20) SER21 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 21) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 8 21 0 0 0 ( 28) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 ( 52) ALA53 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 0 3 3 1 0 0 0 0 0 0 0 prot.sequence kpvtLYdvaeyagvSYQtvSRvvnqashvsaktrekveaamaelnyipnrvAqqLAgkqslligvatsslalhapsqivaaiksradqlgasvvvsmversgveacktavhnllaqrvsgliinyplddqdaiaveaactnvpalfldvsdqtpinsiifshedgtrlgvehlvalghqqiallagplssvsarlrlagwhkyltrnqiqpiaeregdwsamsgfqqtmqmlnegivptamlvandqmalgamraitesglrvgadisvvgyddtedsscyipplttikqdfrllgqtsvdrllqlsqgqavkgnqllpvslvkrktt/kpvtLYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrvAqqLAgkqslligvatsslalhapsqivaaiksradqlgasvvvsmversgveacktavhnllaqrvsgliinyplddqdaiaveaactnvpalfldvsdqtpinsiifshedgtrlgvehlvalghqqiallagplssvsarlrlagwhkyltrnqiqpiaeregdwsamsgfqqtmqmlnegivptamlvandqmalgamraitesglrvgadisvvgyddtedsscyipplttikqdfrllgqtsvdrllqlsqgqavkgnqllpvslvkrkttla >1efa_B:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE LAC REPRESSOR DIMER BOUND TO OPERATOR AND THE ANTI-INDUCER ONPF organism=Escherichia coli DNA sequence DT(D5):DA(E18) DG(D6):DC(E17) DT(D7):DA(E16) DG(D8):DC(E15) DA(D9):DT(E14) DG(D10):DC(E13) DC(D11):DG(E12) DG(D12):DC(E11) DC(D13):DG(E10) DT(D14):DA(E9) DC(D15):DG(E8) DA(D16):DT(E7) DC(D17):DG(E6) DA(D18):DT(E5) DA(D19):DT(E4) DT(D20):DA(E3) DT(D21):DA(E2) chainB ( 5) LEU6 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 15) SER16 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 16) TYR17 0 0 0 0 0 0 0 0 0 3 7 16 0 0 0 0 0 ( 17) GLN18 0 0 0 0 0 0 0 0 0 1 9 9 7 0 0 0 0 ( 20) SER21 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 21) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 8 21 0 0 0 ( 28) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 ( 52) ALA53 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 0 3 3 1 0 0 0 0 0 0 0 prot.sequence kpvtLYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrvAqqLAgkqslligvatsslalhapsqivaaiksradqlgasvvvsmversgveacktavhnllaqrvsgliinyplddqdaiaveaactnvpalfldvsdqtpinsiifshedgtrlgvehlvalghqqiallagplssvsarlrlagwhkyltrnqiqpiaeregdwsamsgfqqtmqmlnegivptamlvandqmalgamraitesglrvgadisvvgyddtedsscyipplttikqdfrllgqtsvdrllqlsqgqavkgnqllpvslvkrkttla >1egw_A:SRF-like; title=CRYSTAL STRUCTURE OF MEF2A CORE BOUND TO DNA organism=Homo sapiens DNA sequence DA(E2):DT(F17) DA(E3):DT(F16) DG(E4):DC(F15) DC(E5):DG(F14) DT(E6):DA(F13) DA(E7):DT(F12) DT(E8):DA(F11) DT(E9):DA(F10) DA(E10):DT(F9) DT(E11):DA(F8) DT(E12):DA(F7) DA(E13):DT(F6) DG(E14):DC(F5) DC(E15):DG(F4) DT(E16):DA(F3) DT(E17):DA(F2) chainA ( 2) ARG3 0 0 0 10 14 8 0 0 0 0 0 0 0 0 0 0 ( 14) ARG15 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqitrimdeRnrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkytey >1egw_AB:SRF-like; title=CRYSTAL STRUCTURE OF MEF2A CORE BOUND TO DNA organism=Homo sapiens DNA sequence DA(E2):DT(F17) DA(E3):DT(F16) DG(E4):DC(F15) DC(E5):DG(F14) DT(E6):DA(F13) DA(E7):DT(F12) DT(E8):DA(F11) DT(E9):DA(F10) DA(E10):DT(F9) DT(E11):DA(F8) DT(E12):DA(F7) DA(E13):DT(F6) DG(E14):DC(F5) DC(E15):DG(F4) DT(E16):DA(F3) DT(E17):DA(F2) chainA ( 2) ARG3 0 0 0 10 14 8 0 0 0 0 0 0 0 0 0 0 ( 14) ARG15 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) ARG3 0 0 0 0 0 0 0 0 0 0 7 14 10 0 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 prot.sequence gRkkiqitrimdeRnrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkytey/gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteyn >1ej9_A:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes; title=CRYSTAL STRUCTURE OF HUMAN TOPOISOMERASE I DNA COMPLEX organism=Homo sapiens DNA sequence DA(C1):DT(D122) DA(C2):DT(D121) DA(C3):DT(D120) DA(C4):DT(D119) DA(C5):DT(D118) DG(C6):DC(D117) DA(C7):DT(D116) DC(C8):DG(D115) DT(C9):DA(D114) DC(C10):DG(D113) DA(C11):DT(D112) DG(C12):DC(D111) DA(C13):DT(D110) DA(C14):DT(D109) DA(C15):DT(D108) DA(C16):DT(D107) DA(C17):DT(D106) DT(C18):DA(D105) DT(C19):DA(D104) DT(C20):DA(D103) DT(C21):DA(D102) DT(C22):DA(D101) chainA (150) ASN352 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (162) ARG364 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (222) ILE424 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) TYR426 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) MET428 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) ASN491 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) LYS532 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 (331) ASP533 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wkwweeerypegikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkeriaNfkieppglfrgRgnhpkmgmlkrrimpediiincskdakvpspppghkwkevrhdnkvtwlvswteniqgsIkYiMlnpssrikgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNekeegetadtvgccslrvehinlhpeldgqeyvvefdflgKDsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynranravailcnhqialgtsklNfldpritvawckkwgvpiekiynktqrekfawaidmadedyef >1emh_A:Uracil-DNA_glycosylase-like; title=CRYSTAL STRUCTURE OF HUMAN URACIL-DNA GLYCOSYLASE BOUND TO UNCLEAVED SUBSTRATE-CONTAINING DNA organism=Homo sapiens DNA sequence DA(C22):DT(B10) DA(C23):DT(B9) DG(C24):DC(B8) DA(C25):DT(B7) DT(C26):DA(B6) DA(C27):P2U(B5) DA(C28):DT(B4) DC(C29):DG(B3) DA(C30):DT(B2) chainA ( 63) GLN144 0 0 0 0 0 2 0 0 0 ( 66) TYR147 0 0 0 0 0 15 0 0 0 ( 76) CYS157 0 0 0 0 0 1 0 0 0 ( 77) PHE158 0 0 0 0 0 19 0 0 0 (123) ASN204 0 0 0 0 0 11 0 0 0 (187) HIS268 0 0 0 0 0 7 0 0 0 (190) PRO271 0 0 0 0 0 0 6 0 0 (191) LEU272 0 0 0 0 22 0 13 0 0 prot.sequence meffgeswkkhlsgefgkpyfiklmgfvaeerkhytvyppphqvftwtqmcdikdvkvvilgqdpyhgpnqahglcfsvqrpvppppsleniykelstdiedfvhpghgdlsgwakqgvlllnavltvrahqanshkergweqftdavvswlnqnsnglvfllwgsyaqkkgsaidrkrhhvlqtahpsPLsvyRgffgcrhfsktnellqksgkkpidwkel >1emj_A:Uracil-DNA_glycosylase-like; title=URACIL-DNA GLYCOSYLASE BOUND TO DNA CONTAINING A 4'-THIO- 2'DEOXYURIDINE ANALOG PRODUCT organism=Homo sapiens DNA sequence DA(C22):DT(B10) DA(C23):DT(B9) DG(C24):DC(B8) DA(C25):DT(B7) DT(C26):DA(B6) DA(C27):ASU(B5) DA(C28):DT(B4) DC(C29):DG(B3) DA(C30):DT(B2) chainA (190) PRO271 0 0 0 0 0 0 5 0 0 (191) LEU272 0 0 0 0 20 3 19 0 0 (194) TYR275 0 0 0 0 0 1 0 0 0 (195) ARG276 0 0 0 1 4 0 0 0 0 prot.sequence meffgeswkkhlsgefgkpyfiklmgfvaeerkhytvyppphqvftwtqmcdikdvkvvilgqdpyhgpnqahglcfsvqrpvppppsleniykelstdiedfvhpghgdlsgwakqgvlllnavltvrahqanshkergweqftdavvswlnqnsnglvfllwgsyaqkkgsaidrkrhhvlqtahpsPLsvYRgffgcrhfsktnellqksgkkpidwkel >1eo3_AB:Restriction_endonuclease-like; title=INHIBITION OF ECORV ENDONUCLEASE BY DEOXYRIBO-3'-S- PHOSPHOROTHIOLATES: A HIGH RESOLUTION X-RAY CRYSTALLOGRAPHIC STUDY organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) TSP(D6):DA(C7) DA(D7):TSP(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) chainA ( 69) ASN70 0 0 0 0 0 3 7 6 0 (103) LYS104 0 1 0 0 0 0 0 0 0 (105) THR106 0 0 1 11 0 0 0 0 0 (179) SER183 0 0 3 6 0 0 0 0 0 (181) ASN185 0 0 17 11 0 0 0 0 0 (182) THR186 0 0 0 8 1 5 0 0 0 (184) ASN188 0 0 0 4 0 0 0 0 0 chainB (102) THR106 0 0 0 0 0 0 9 0 0 (174) SER183 0 0 0 0 0 0 7 4 0 (176) ASN185 0 0 0 0 0 0 10 16 0 (177) THR186 0 0 0 0 5 1 8 0 0 (179) ASN188 0 0 0 0 0 0 4 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatksslktynilneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqnhypdftlykpsepnkkiaidikttytnekikfTlggytsfirnntknivypfdqyiahwiigyvytrvslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1eo3_B:Restriction_endonuclease-like; title=INHIBITION OF ECORV ENDONUCLEASE BY DEOXYRIBO-3'-S- PHOSPHOROTHIOLATES: A HIGH RESOLUTION X-RAY CRYSTALLOGRAPHIC STUDY organism=Escherichia coli DNA sequence DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) TSP(C6):DA(D7) DA(C7):TSP(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainB (102) THR106 0 0 9 0 0 0 0 0 0 (174) SER183 0 4 7 0 0 0 0 0 0 (176) ASN185 0 16 10 0 0 0 0 0 0 (177) THR186 0 0 8 1 5 0 0 0 0 (179) ASN188 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqnhypdftlykpsepnkkiaidikttytnekikfTlggytsfirnntknivypfdqyiahwiigyvytrvslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1eo4_AB:Restriction_endonuclease-like; title=ECORV BOUND TO MN2+ AND COGNATE DNA CONTAINING A 3'S SUBSTITION AT THE CLEAVAGE SITE organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) TSP(D6):DA(C7) DA(D7):TSP(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) chainA ( 69) ASN70 0 0 0 0 0 5 3 3 0 (105) THR106 0 0 1 10 0 0 0 0 0 (177) SER183 0 0 3 7 0 0 0 0 0 (179) ASN185 0 0 13 10 0 0 0 0 0 (180) THR186 0 0 0 9 3 5 0 0 0 (182) ASN188 0 0 0 4 0 0 0 0 0 chainB ( 69) ASN70 0 0 3 3 6 0 0 0 0 (102) THR106 0 0 0 0 0 0 7 0 0 (174) SER183 0 0 0 0 0 0 7 2 0 (176) ASN185 0 0 0 0 0 0 10 14 0 (177) THR186 0 0 0 0 5 3 8 0 0 (179) ASN188 0 0 0 0 0 0 4 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvksslktynilneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkkikfTlggytsfirnntknivypfdqyiahwiigyvytrvslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1eo4_B:Restriction_endonuclease-like; title=ECORV BOUND TO MN2+ AND COGNATE DNA CONTAINING A 3'S SUBSTITION AT THE CLEAVAGE SITE organism=Escherichia coli DNA sequence DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) TSP(C6):DA(D7) DA(C7):TSP(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainB ( 69) ASN70 0 0 0 0 6 3 3 0 0 (102) THR106 0 0 7 0 0 0 0 0 0 (174) SER183 0 2 7 0 0 0 0 0 0 (176) ASN185 0 14 10 0 0 0 0 0 0 (177) THR186 0 0 8 3 5 0 0 0 0 (179) ASN188 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkkikfTlggytsfirnntknivypfdqyiahwiigyvytrvslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1eon_A:Restriction_endonuclease-like; title=ECORV BOUND TO 3'-S-PHOSPHOROTHIOLATE DNA AND CA2+ organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) TSP(D6):DA(C7) DA(D7):TSP(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) DT(D11):DA(C2) chainA ( 69) ASN70 0 0 0 0 0 3 6 5 0 0 (105) THR106 0 0 1 10 0 0 0 0 0 0 (174) SER183 0 0 4 7 0 0 0 0 0 0 (176) ASN185 0 0 17 10 0 0 0 0 0 0 (177) THR186 0 0 0 8 3 5 0 0 0 0 (179) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvksslktyniipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1eon_AB:Restriction_endonuclease-like; title=ECORV BOUND TO 3'-S-PHOSPHOROTHIOLATE DNA AND CA2+ organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) TSP(D6):DA(C7) DA(D7):TSP(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) DT(D11):DA(C2) chainA ( 69) ASN70 0 0 0 0 0 3 6 5 0 0 (105) THR106 0 0 1 10 0 0 0 0 0 0 (174) SER183 0 0 4 7 0 0 0 0 0 0 (176) ASN185 0 0 17 10 0 0 0 0 0 0 (177) THR186 0 0 0 8 3 5 0 0 0 0 (179) ASN188 0 0 0 4 0 0 0 0 0 0 chainB (101) THR106 0 0 0 0 0 0 9 1 0 0 (173) SER183 0 0 0 0 0 0 6 3 0 0 (175) ASN185 0 0 0 0 0 0 11 17 0 0 (176) THR186 0 0 0 0 5 4 9 0 0 0 (178) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvksslktyniipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqnhypdftlykpsepnkkiaidikttytnkikfTlggytsfirnntknivypfdqyiahwiigyvytrvslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrnkynniseyrnwiyrgrk >1eoo_A:Restriction_endonuclease-like; title=ECORV BOUND TO COGNATE DNA organism=Escherichia coli DNA sequence DG(C1):DC(D12) DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) DC(C12):DG(D1) chainA ( 69) ASN70 0 0 0 1 2 9 0 0 0 0 0 0 (105) THR106 0 0 0 0 0 0 0 10 1 0 0 0 (182) SER183 0 0 0 0 0 0 0 6 2 0 0 0 (184) ASN185 0 0 0 0 0 0 0 13 12 0 0 0 (185) THR186 0 0 0 0 0 5 4 9 1 0 0 0 (187) ASN188 0 0 0 0 0 0 0 4 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1eoo_AB:Restriction_endonuclease-like; title=ECORV BOUND TO COGNATE DNA organism=Escherichia coli DNA sequence DG(C1):DC(D12) DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) DC(C12):DG(D1) chainA ( 69) ASN70 0 0 0 1 2 9 0 0 0 0 0 0 (105) THR106 0 0 0 0 0 0 0 10 1 0 0 0 (182) SER183 0 0 0 0 0 0 0 6 2 0 0 0 (184) ASN185 0 0 0 0 0 0 0 13 12 0 0 0 (185) THR186 0 0 0 0 0 5 4 9 1 0 0 0 (187) ASN188 0 0 0 0 0 0 0 4 0 0 0 0 chainB ( 69) ASN70 0 0 0 0 0 0 6 2 1 0 0 0 (105) THR106 0 0 0 1 9 0 0 0 0 0 0 0 (182) SER183 0 0 0 2 6 0 0 0 0 0 0 0 (184) ASN185 0 0 0 17 11 0 0 0 0 0 0 0 (185) THR186 0 0 0 0 8 3 5 0 0 0 0 0 (187) ASN188 0 0 0 0 4 0 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1eop_A:Restriction_endonuclease-like; title=ECORV BOUND TO COGNATE DNA organism=Escherichia coli DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainA ( 64) ASN70 0 0 6 6 2 0 0 0 0 0 ( 98) LYS104 0 0 0 0 0 0 0 0 2 0 (100) THR106 0 0 0 0 0 0 9 1 0 0 (177) SER183 0 0 0 0 0 0 7 3 0 0 (179) ASN185 0 0 0 0 0 0 12 16 0 0 (180) THR186 0 0 0 0 5 5 6 0 0 0 (182) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydevcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgr >1eop_AB:Restriction_endonuclease-like; title=ECORV BOUND TO COGNATE DNA organism=Escherichia coli DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainA ( 64) ASN70 0 0 6 6 2 0 0 0 0 0 ( 98) LYS104 0 0 0 0 0 0 0 0 2 0 (100) THR106 0 0 0 0 0 0 9 1 0 0 (177) SER183 0 0 0 0 0 0 7 3 0 0 (179) ASN185 0 0 0 0 0 0 12 16 0 0 (180) THR186 0 0 0 0 5 5 6 0 0 0 (182) ASN188 0 0 0 0 0 0 4 0 0 0 chainB ( 69) ASN70 0 0 0 0 0 6 2 1 0 0 (105) THR106 0 0 0 6 0 0 0 0 0 0 (179) SER183 0 0 4 5 0 0 0 0 0 0 (181) ASN185 0 0 19 10 0 0 0 0 0 0 (182) THR186 0 0 0 8 5 5 0 0 0 0 (184) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydevcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgr/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1eqz_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE AT 2.5 A RESOLUTION organism=GALLUS GALLUS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA chainB ( 12) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) LYS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 12) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 36) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 32) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (121) SER122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainF chainG ( 25) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 25) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgrgkqggkarakaksrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkktdshka/vtktqkkgdkkRkKsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/apatggvkkphRYrpgtvalreiryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/gakrhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakktvtamdvvyalkrqgrtlygfgg/grgkqggkarakaksrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkktdShkakak/tktqkkgdkkrkksrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/prkqlatkaarksapatggvkkphRyrpgtvalreirryqkstellirLpfqrlvreiaqdktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarirgera/kglgkggakrhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >1eqz_E:Histone-fold; title=X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE AT 2.5 A RESOLUTION organism=GALLUS GALLUS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainE (121) SER122 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence grgkqggkarakaksrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkktdShkakak >1eri_A:Restriction_endonuclease-like; title=X-RAY STRUCTURE OF THE DNA-ECO RI ENDONUCLEASE-DNA RECOGNITION COMPLEX: THE RECOGNITION NETWORK AND THE INTEGRATION OF RECOGNITION AND CLEAVAGE organism=ESCHERICHIA COLI DNA sequence DT(B1) DC(B2) DG(B3) DC(B4) DG(B5) DA(B6) DA(B7) DT(B8) DT(B9) DC(B10) DG(B11) DC(B12) DG(B13) chainA ( 73) LYS89 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 99) GLN115 0 0 0 0 0 0 0 4 0 0 0 0 0 (121) MET137 0 0 0 0 0 0 0 0 2 1 0 0 0 (122) ALA138 0 0 0 0 0 0 0 0 0 3 1 0 0 (125) ASN141 0 0 0 0 0 0 0 1 0 0 0 0 0 (126) ALA142 0 0 0 0 0 0 5 5 0 0 0 0 0 (129) ARG145 0 0 0 0 0 5 11 0 0 0 0 0 0 prot.sequence sqgvigifgdyakahdlavgevsklvkkalsneypqlsfryrdsikkteinealkkidpdlggtlfvsnssiKpdggivevkddygewrvvlvaeakhQgkdiinirngllvgkrgdqdlMAagNAieRshkniseianfmlseshfpyvlflegsnfltenisitrpdgrvvnleynsgilnrldrltaanygmpinsnlcinkfvnhkdksimlqaasiytqgdgrewdskimfeimfdisttslrvlgrdlfeqltsk >1esg_A:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE BAMHI BOUND TO A NON-SPECIFIC DNA. organism=Bacillus amyloliquefaciens DNA sequence DT(D1):DA(C8) DG(D2):DC(C7) DA(D3):DT(C6) DA(D4):DT(C5) DT(D5):DA(C4) DC(D6):DG(C3) DC(D7):DG(C2) DA(D8):DT(C1) chainA (155) ARG155 17 5 0 0 0 0 0 0 (195) SER195 0 0 0 0 0 0 0 4 (196) ASP196 0 0 0 0 0 0 0 1 prot.sequence mevekefitdeakellskdkliqqaynevktsicspiwpatsktftinntekncngvvpikelcytlledtynwyrekpldilklekkkggpidvykefienselkrvgmefetgnissahrsmnklllglkhgeidlaiilmpikqlayyltdRvtnfeelepyfeltegqpfifigfnaeaynsnvplipkgSDgmskrsikkwkdk >1esg_AB:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE BAMHI BOUND TO A NON-SPECIFIC DNA. organism=Bacillus amyloliquefaciens DNA sequence DT(D1):DA(C8) DG(D2):DC(C7) DA(D3):DT(C6) DA(D4):DT(C5) DT(D5):DA(C4) DC(D6):DG(C3) DC(D7):DG(C2) DA(D8):DT(C1) chainA (155) ARG155 17 5 0 0 0 0 0 0 (195) SER195 0 0 0 0 0 0 0 4 (196) ASP196 0 0 0 0 0 0 0 1 chainB (155) ARG155 0 0 0 0 0 3 5 0 prot.sequence mevekefitdeakellskdkliqqaynevktsicspiwpatsktftinntekncngvvpikelcytlledtynwyrekpldilklekkkggpidvykefienselkrvgmefetgnissahrsmnklllglkhgeidlaiilmpikqlayyltdRvtnfeelepyfeltegqpfifigfnaeaynsnvplipkgSDgmskrsikkwkdk/mevekefitdeakellskdkliqqaynevktsicspiwpatsktftinntekncngvvpikelcytlledtynwyrekpldilklekkkggpidvykefienselkrvgmefetgnissahrsmnklllglkhgeidlaiilmpikqlayyltdRvtnfeelepyfeltegqpfifigfnaeaynsnvplipkgsdgmskrsikkwkdkven >1evw_AB:His-Me_finger_endonucleases; title=L116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA. organism=Physarum polycephalum DNA sequence DT(F1):DA(M21) DG(F2):DC(M20) DA(F3):DT(M19) DC(F4):DG(M18) DT(F5):DA(M17) DC(F6):DG(M16) DT(F7):DA(M15) DC(F8):DG(M14) DT(F9):DA(E13) DT(F10):DA(E12) DA(F11):DT(E11) DA(F12):DT(E10) DG(O13):DC(E9) DG(O14):DC(E8) DT(O15):DA(E7) DA(O16):DT(E6) DG(O17):DC(E5) DC(O18):DG(E4) DC(O19):DG(E3) DA(O20):DT(E2) chainA ( 54) ALA55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 56) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 24 11 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 ( 64) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 7 ( 66) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 71) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 13 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB ( 54) ALA55 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN57 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 11 23 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS65 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR67 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL72 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 1 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesaddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv/altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesaddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >1evw_B:His-Me_finger_endonucleases; title=L116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA. organism=Physarum polycephalum DNA sequence DT(E2):DA(O20) DG(E3):DC(O19) DG(E4):DC(O18) DC(E5):DG(O17) DT(E6):DA(O16) DA(E7):DT(O15) DC(E8):DG(O14) DC(E9):DG(O13) DT(E10):DA(F12) DT(E11):DA(F11) DA(E12):DT(F10) DA(E13):DT(F9) DG(M14):DC(F8) DA(M15):DT(F7) DG(M16):DC(F6) DA(M17):DT(F5) DG(M18):DC(F4) DT(M19):DA(F3) DC(M20):DG(F2) DA(M21):DT(F1) chainB ( 54) ALA55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 56) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 23 11 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 ( 64) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 ( 66) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 71) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 1 0 0 (119) LYS120 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesaddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >1evw_CD:His-Me_finger_endonucleases; title=L116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA. organism=Physarum polycephalum DNA sequence DT(G2):DA(P20) DG(G3):DC(P19) DG(G4):DC(P18) DC(G5):DG(P17) DT(G6):DA(P16) DA(G7):DT(P15) DC(G8):DG(P14) DC(G9):DG(P13) DT(G10):DA(H12) DT(G11):DA(H11) DA(G12):DT(H10) DA(G13):DT(H9) DG(N14):DC(H8) DA(N15):DT(H7) DG(N16):DC(H6) DA(N17):DT(H5) DG(N18):DC(H4) DT(N19):DA(H3) DC(N20):DG(H2) DA(N21):DT(H1) chainC ( 54) ALA55 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN57 0 0 0 0 5 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 16 28 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS65 11 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL72 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainD ( 54) ALA55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 56) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 2 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 27 13 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 0 0 0 0 ( 64) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 ( 66) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 71) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 73) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 10 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrtinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesaddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv/altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesaddnkgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >1ewn_A:FMT_C-terminal_domain-like; title=CRYSTAL STRUCTURE OF THE HUMAN AAG DNA REPAIR GLYCOSYLASE COMPLEXED WITH 1,N6-ETHENOADENINE-DNA organism=Homo sapiens DNA sequence DG(D1):DC(E25) DA(D2):DT(E24) DC(D3):DG(E23) DA(D4):DT(E22) DT(D5):DA(E21) DG(D6):DC(E20) EDA(D7):DT(E19) DT(D8):DA(E18) DT(D9):DA(E17) DG(D10):DC(E16) DC(D11):DG(E15) chainA ( 46) TYR127 0 0 0 0 0 0 49 0 0 0 0 ( 54) ALA135 0 0 0 0 0 0 2 0 0 0 0 ( 55) HIS136 0 0 0 0 0 0 25 0 0 0 0 ( 68) MET149 0 0 0 0 0 0 3 0 0 0 0 ( 76) TYR157 0 0 0 0 0 0 3 0 0 0 0 ( 78) TYR159 0 0 0 0 0 0 15 0 0 0 0 ( 81) TYR162 0 0 0 0 0 24 1 48 0 0 0 ( 83) MET164 0 0 0 0 0 0 1 6 0 0 0 ( 84) TYR165 0 0 0 0 0 0 0 5 1 0 0 ( 88) ASN169 0 0 0 0 0 0 10 0 0 0 0 ( 97) CYS178 0 0 0 0 0 0 2 0 0 0 0 ( 99) LEU180 0 0 0 0 0 0 8 0 0 0 0 prot.sequence hltrlgleffdqpavplaraflgqvlvrrlpngtelrgrivetqaylgpedeaahsrggrqtprnrgmfmkpgtlyvyiiYgMYfcmnissqgdgacvllraleplegletmrqlrstvlkdrelcsgpsklcqalainksfdqrdlaqdeavwlergpavvaaarvgvghagewarkplrfyvrgspwvsvvdrvaeqd >1ewq_A:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE TAQ MUTS COMPLEXED WITH A HETERODUPLEX DNA AT 2.2 A RESOLUTION organism=Thermus aquaticus DNA sequence DC(C1902):DG(D1972) DG(C1903):DC(D1971) DA(C1904):DT(D1970) DC(C1905):DG(D1969) DG(C1906):DC(D1968) DC(C1907):DG(D1967) DT(C1908):DA(D1966) DA(C1909):DT(D1965) DG(C1910):DC(D1964) DC(C1911):DG(D1963) DG(C1912):DC(D1962) DG(C1914):DC(D1961) DC(C1915):DG(D1960) DG(C1916):DC(D1959) DG(C1917):DC(D1958) DC(C1918):DG(D1957) DT(C1919):DA(D1956) DC(C1920):DG(D1955) DG(C1921):DC(D1954) DT(C1922):DA(D1953) DC(C1923):DG(D1952) chainA ( 39) PHE39 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 prot.sequence megmlkgegpgplppllqqyvelrdqypdylllfqvgdFyecfgedaerlaralglvlthktskdfttpmagiplrafeayaerllkmgfrlavadqvepaeeaeglvrrevtqlltpgtllqesllpreanylaaiatgdgwglafldvstgefkgtvlksksalydelfrhrpaevllapellengafldefrkrfpvmlseapfepegegplalrrargallayaqrtqggalslqpfrfydpgafmrlpeatlralevfeplrgqdtlfsvldetrtapgrrllqswlrhplldrgplearldrvegfvregalregvrrllyrladlerlatrlelgraspkdlgalrrslqilpelrallgeevglpdlsplkeeleaalvedpplkvseggliregydpdldalraahregvayfleleererertgiptlkvgynavfgyylevtrpyyervpkeyrpvqtlkdrqrytlpemkekerevyrlealirrreeevflevrerakrqaealreaarilaeldvyaalaevavrygyvrprfgdrlqiragrhpvverrtefvpndlemahelvlitgpnmagkstflrqtaliallaqvgsfvpaeeahlplfdgiytrigagkstfmvemeevalilkeatenslvlldevgrgtssldgvaiatavaealherraytlfathyfeltalglprlknlhvaareeagglvfyhqvlpgpasksygvevaamaglpkevvararallqamaar >1ewq_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE TAQ MUTS COMPLEXED WITH A HETERODUPLEX DNA AT 2.2 A RESOLUTION organism=Thermus aquaticus DNA sequence DC(C1902):DG(D1972) DG(C1903):DC(D1971) DA(C1904):DT(D1970) DC(C1905):DG(D1969) DG(C1906):DC(D1968) DC(C1907):DG(D1967) DT(C1908):DA(D1966) DA(C1909):DT(D1965) DG(C1910):DC(D1964) DC(C1911):DG(D1963) DG(C1912):DC(D1962) DG(C1914):DC(D1961) DC(C1915):DG(D1960) DG(C1916):DC(D1959) DG(C1917):DC(D1958) DC(C1918):DG(D1957) DT(C1919):DA(D1956) DC(C1920):DG(D1955) DG(C1921):DC(D1954) DT(C1922):DA(D1953) DC(C1923):DG(D1952) chainA ( 39) PHE39 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 chainB prot.sequence megmlkgegpgplppllqqyvelrdqypdylllfqvgdFyecfgedaerlaralglvlthktskdfttpmagiplrafeayaerllkmgfrlavadqvepaeeaeglvrrevtqlltpgtllqesllpreanylaaiatgdgwglafldvstgefkgtvlksksalydelfrhrpaevllapellengafldefrkrfpvmlseapfepegegplalrrargallayaqrtqggalslqpfrfydpgafmrlpeatlralevfeplrgqdtlfsvldetrtapgrrllqswlrhplldrgplearldrvegfvregalregvrrllyrladlerlatrlelgraspkdlgalrrslqilpelrallgeevglpdlsplkeeleaalvedpplkvseggliregydpdldalraahregvayfleleererertgiptlkvgynavfgyylevtrpyyervpkeyrpvqtlkdrqrytlpemkekerevyrlealirrreeevflevrerakrqaealreaarilaeldvyaalaevavrygyvrprfgdrlqiragrhpvverrtefvpndlemahelvlitgpnmagkstflrqtaliallaqvgsfvpaeeahlplfdgiytrigagkstfmvemeevalilkeatenslvlldevgrgtssldgvaiatavaealherraytlfathyfeltalglprlknlhvaareeagglvfyhqvlpgpasksygvevaamaglpkevvararallqamaar/megmlkgegpgplppllqqyvelrdqypdylllfqvgdFyecfgedaerlaralglvlthktskdfttpmagiplrafeayaerllkmgfrlavadqvepvrrevtqlltpgtllqesllpreanylaaiatgdgwglafldvstgefkgtvlksksalydelfrhrpaevllapellengafldefrkrfpvmlseapfepegegplalrrargallayaqrtqggalslqpfrfydpgafmrlpeatlralevfeplrgqdtlfsvldetrtapgrrllqswlrhplldrgplearldrvegfvregalregvrrllyrladlerlatrlelgraspkdlgalrrslqilpelrallgeevglpdlsplkeeleaalvedpplkvseggliregydpdldalraahregvayfleleererertgiptlkvgynavfgyylevtrpyyervpkeyrpvqtlkdrqrytlpemkekerevyrlealirrreeevflevrerakrqaealreaarilaeldvyaalaevavrygyvrprfgdrlqiragrhpvverrtefvpndlemahelvlitgpnmagkstflrqtaliallaqvgsfvpaeeahlplfdgiytrigagkstfmvemeevalilkeatenslvlldevgrgtssldgvaiatavaealherraytlfathyfeltalglprlknlhvaareeagglvfyhqvlpgpasksygvevaamaglpkevvararallqam >1exi_A:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPSB organism=Bacillus subtilis DNA sequence DA(M-11) DC(M-10) DC(M-9) DC(M-8) DT(M-7) DC(M-6) DC(M-5) DC(M-4) DC(M-3) DT(M-2) DT(M1) DA(M2) DG(M3) DG(M4) DG(M5) DG(M6) DA(M7) DG(M8) DG(M9) DG(M10) DT(M11) chainA ( 21) ARG23 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR42 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esyysigevsklanvsikalRyydkidlfkpayvdpdtsYryytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaegigpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkiria >1exj_A:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPP organism=Bacillus subtilis DNA sequence DA(M-11) DC(M-10) DC(M-9) DC(M-8) DT(M-7) DC(M-6) DC(M-5) DC(M-4) DC(M-3) DT(M-2) DT(M1) DA(M2) DG(M3) DG(M4) DG(M5) DG(M6) DA(M7) DG(M8) DG(M9) DG(M10) DT(M11) chainA ( 21) ARG23 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR42 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esyysigevsklanvsikalRyydkidlfkpayvdpdtsYryytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaegigpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkiria >1eyu_AB:Restriction_endonuclease-like; title=HIGH RESOLUTION STRUCTURE OF THE PVUII ENDONCULEASE/COGNATE DNA COMPLEX AT PH 4.6 organism=Proteus vulgaris DNA sequence DG(D3):DC(C14) DA(D4):DT(C13) DC(D5):DG(C12) DC(D6):DG(C11) DA(D7):DT(C10) DG(D8):DC(C9) DC(D9):DG(C8) DT(D10):DA(C7) DG(D11):DC(C6) DG(D12):DC(C5) DT(D13):DA(C4) chainA ( 33) ASP34 0 0 0 0 0 5 2 0 0 0 0 ( 76) THR77 0 0 0 0 0 0 0 0 0 0 1 ( 80) SER81 0 0 0 0 0 0 0 8 2 0 0 ( 83) HIS84 0 0 0 0 0 0 13 25 0 0 0 (139) ASN140 0 0 0 0 0 0 0 10 14 0 0 (140) ASN141 0 0 0 0 0 0 0 22 9 0 0 (142) LYS143 0 0 0 0 0 0 0 0 10 9 1 chainB ( 33) ASP34 0 0 0 0 0 2 6 0 0 0 0 ( 77) SER81 0 0 0 2 8 0 0 0 0 0 0 ( 80) HIS84 0 0 0 0 27 14 0 0 0 0 0 (136) ASN140 0 0 0 14 10 0 0 0 0 0 0 (137) ASN141 0 0 0 9 22 0 0 0 0 0 0 (139) LYS143 0 0 9 10 0 0 0 0 0 0 0 prot.sequence shpdlnkllelwphiqeyqdlalkhgindifQDnggkllqvllitgltvlpgregndavdnagqeyelksinidlTkgfSthHhmnpviiakyrqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy/shpdlnkllelwphiqeyqdlalkhgindifQDnggkllqvllitgltvlpgndavdnagqeyelksinidlTkgfSthHhmnpviiakyrqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy >1eyu_B:Restriction_endonuclease-like; title=HIGH RESOLUTION STRUCTURE OF THE PVUII ENDONCULEASE/COGNATE DNA COMPLEX AT PH 4.6 organism=Proteus vulgaris DNA sequence DG(D3):DC(C14) DA(D4):DT(C13) DC(D5):DG(C12) DC(D6):DG(C11) DA(D7):DT(C10) DG(D8):DC(C9) DC(D9):DG(C8) DT(D10):DA(C7) DG(D11):DC(C6) DG(D12):DC(C5) DT(D13):DA(C4) chainB ( 33) ASP34 0 0 0 0 0 2 6 0 0 0 0 ( 77) SER81 0 0 0 2 8 0 0 0 0 0 0 ( 80) HIS84 0 0 0 0 27 14 0 0 0 0 0 (136) ASN140 0 0 0 14 10 0 0 0 0 0 0 (137) ASN141 0 0 0 9 22 0 0 0 0 0 0 (139) LYS143 0 0 9 10 0 0 0 0 0 0 0 prot.sequence shpdlnkllelwphiqeyqdlalkhgindifQDnggkllqvllitgltvlpgndavdnagqeyelksinidlTkgfSthHhmnpviiakyrqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy >1f0o_AB:Restriction_endonuclease-like; title=PVUII ENDONUCLEASE/COGNATE DNA COMPLEX (GLUTARALDEHYDE-CROSSLINKED CRYSTAL) AT PH 7.5 WITH TWO CALCIUM IONS AT EACH ACTIVE SITE organism=Proteus vulgaris DNA sequence DG(D3):DC(C14) DA(D4):DT(C13) DC(D5):DG(C12) DC(D6):DG(C11) DA(D7):DT(C10) DG(D8):DC(C9) DC(D9):DG(C8) DT(D10):DA(C7) DG(D11):DC(C6) DG(D12):DC(C5) DT(D13):DA(C4) chainA ( 33) ASP34 0 0 0 0 0 7 1 0 0 0 0 ( 78) SER81 0 0 0 0 0 0 0 11 2 0 0 ( 81) HIS84 0 0 0 0 0 0 9 23 0 0 0 (137) ASN140 0 0 0 0 0 0 0 10 13 0 0 (138) ASN141 0 0 0 0 0 0 0 18 8 0 0 (140) LYS143 0 0 0 0 0 0 0 0 10 10 1 chainB ( 30) GLN33 0 0 0 0 0 0 2 0 0 0 0 ( 31) ASP34 0 0 0 0 0 0 8 0 0 0 0 ( 76) SER81 0 0 0 2 8 0 0 0 0 0 0 ( 79) HIS84 0 0 0 0 24 12 0 0 0 0 0 (135) ASN140 0 0 0 14 10 0 0 0 0 0 0 (136) ASN141 0 0 0 7 20 0 0 0 0 0 0 (138) LYS143 0 1 8 10 0 0 0 0 0 0 0 prot.sequence shpdlnkllelwphiqeyqdlalkhgindifqDnggkllqvllitgltvlpegndavdnagqeyelksinidlTkgfSthHhmnpviiakyrqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy/pdlnkllelwphiqeyqdlalkhgindifQDnggkllqvllitgltvlpegndavdnagqeyelksinidltkgfSthHhmnpviiakyrqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy >1f0o_B:Restriction_endonuclease-like; title=PVUII ENDONUCLEASE/COGNATE DNA COMPLEX (GLUTARALDEHYDE-CROSSLINKED CRYSTAL) AT PH 7.5 WITH TWO CALCIUM IONS AT EACH ACTIVE SITE organism=Proteus vulgaris DNA sequence DA(C4):DT(D13) DC(C5):DG(D12) DC(C6):DG(D11) DA(C7):DT(D10) DG(C8):DC(D9) DC(C9):DG(D8) DT(C10):DA(D7) DG(C11):DC(D6) DG(C12):DC(D5) DT(C13):DA(D4) DC(C14):DG(D3) chainB ( 30) GLN33 0 0 0 0 2 0 0 0 0 0 0 ( 31) ASP34 0 0 0 0 8 0 0 0 0 0 0 ( 76) SER81 0 0 0 0 0 0 8 2 0 0 0 ( 79) HIS84 0 0 0 0 0 12 24 0 0 0 0 (135) ASN140 0 0 0 0 0 0 10 14 0 0 0 (136) ASN141 0 0 0 0 0 0 20 7 0 0 0 (138) LYS143 0 0 0 0 0 0 0 10 8 1 0 prot.sequence pdlnkllelwphiqeyqdlalkhgindifQDnggkllqvllitgltvlpegndavdnagqeyelksinidltkgfSthHhmnpviiakyrqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy >1f2i_GH:C2H2_and_C2HC_zinc_fingers; title=COCRYSTAL STRUCTURE OF SELECTED ZINC FINGER DIMER BOUND TO DNA organism=Mus musculus DNA sequence DA(B2001):DT(A1014) DT(B2002):DA(A1013) DG(B2003):DC(A1012) DG(B2004):DC(A1011) DG(B2005):DC(A1010) DC(B2006):DG(A1009) DG(B2007):DC(A1008) DC(B2008):DG(A1007) DG(B2009):DC(A1006) DC(B2010):DG(A1005) DC(B2011):DG(A1004) DC(B2012):DG(A1003) DA(B2013):DT(A1002) DT(B2014):DA(A1001) chainG ( 26) ARG1118 0 0 0 0 0 0 2 12 20 0 0 0 0 0 ( 28) ASP1120 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 29) GLU1121 0 0 0 0 0 0 0 0 5 6 0 0 0 0 ( 32) ARG1124 0 0 0 0 0 0 0 0 8 7 0 0 0 0 ( 54) ARG1146 0 0 0 0 0 0 0 0 0 2 13 18 0 0 ( 56) ASP1148 0 0 0 0 0 0 0 0 3 6 1 0 0 0 ( 57) HIS1149 0 0 0 0 0 0 0 0 0 0 0 12 28 0 chainH ( 26) ARG2118 0 0 0 0 0 20 12 1 0 0 0 0 0 0 ( 28) ASP2120 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 29) GLU2121 0 0 0 0 6 4 0 0 0 0 0 0 0 0 ( 32) ARG2124 0 0 0 7 11 4 0 0 0 0 0 0 0 0 ( 54) ARG2146 0 0 17 12 2 0 0 0 0 0 0 0 0 0 ( 56) ASP2148 0 0 0 1 6 4 0 0 0 0 0 0 0 0 ( 57) HIS2149 0 28 11 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nllnyvvpkmrpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRsDHltthirtht/nllnyvvpkmrpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRsDHltthirtht >1f2i_IJ:C2H2_and_C2HC_zinc_fingers; title=COCRYSTAL STRUCTURE OF SELECTED ZINC FINGER DIMER BOUND TO DNA organism=Mus musculus DNA sequence DA(C3001):DT(D4014) DT(C3002):DA(D4013) DG(C3003):DC(D4012) DG(C3004):DC(D4011) DG(C3005):DC(D4010) DC(C3006):DG(D4009) DG(C3007):DC(D4008) DC(C3008):DG(D4007) DG(C3009):DC(D4006) DC(C3010):DG(D4005) DC(C3011):DG(D4004) DC(C3012):DG(D4003) DA(C3013):DT(D4002) DT(C3014):DA(D4001) chainI ( 26) ARG3118 0 0 0 0 0 19 8 3 0 0 0 0 0 0 ( 28) ASP3120 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 29) GLU3121 0 0 0 0 6 4 0 0 0 0 0 0 0 0 ( 32) ARG3124 0 0 0 4 9 4 0 0 0 0 0 0 0 0 ( 54) ARG3146 0 0 21 10 2 0 0 0 0 0 0 0 0 0 ( 56) ASP3148 0 0 0 0 4 2 0 0 0 0 0 0 0 0 ( 57) HIS3149 0 25 11 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 26) ARG4118 0 0 0 0 0 0 0 11 22 0 0 0 0 0 ( 28) ASP4120 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 29) GLU4121 0 0 0 0 0 0 0 0 4 6 0 0 0 0 ( 32) ARG4124 0 0 0 0 0 0 0 0 4 14 9 0 0 0 ( 54) ARG4146 0 0 0 0 0 0 0 0 0 2 14 16 0 0 ( 56) ASP4148 0 0 0 0 0 0 0 0 5 6 2 0 0 0 ( 57) HIS4149 0 0 0 0 0 0 0 0 0 0 0 10 26 0 prot.sequence nllnyvvpkmrpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRSDHltthirtht/nllnyvvpkmrpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRsDHltthirtht >1f2i_J:C2H2_and_C2HC_zinc_fingers; title=COCRYSTAL STRUCTURE OF SELECTED ZINC FINGER DIMER BOUND TO DNA organism=Mus musculus DNA sequence DA(C3001):DT(D4014) DT(C3002):DA(D4013) DG(C3003):DC(D4012) DG(C3004):DC(D4011) DG(C3005):DC(D4010) DC(C3006):DG(D4009) DG(C3007):DC(D4008) DC(C3008):DG(D4007) DG(C3009):DC(D4006) DC(C3010):DG(D4005) DC(C3011):DG(D4004) DC(C3012):DG(D4003) DA(C3013):DT(D4002) DT(C3014):DA(D4001) chainJ ( 26) ARG4118 0 0 0 0 0 0 0 11 22 0 0 0 0 0 ( 28) ASP4120 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 29) GLU4121 0 0 0 0 0 0 0 0 4 6 0 0 0 0 ( 32) ARG4124 0 0 0 0 0 0 0 0 4 14 9 0 0 0 ( 54) ARG4146 0 0 0 0 0 0 0 0 0 2 14 16 0 0 ( 56) ASP4148 0 0 0 0 0 0 0 0 5 6 2 0 0 0 ( 57) HIS4149 0 0 0 0 0 0 0 0 0 0 0 10 26 0 prot.sequence nllnyvvpkmrpyacpvescdrrfsRsDeltRhirihtgqkpfqcricmrnfsRsDHltthirtht >1f2i_KL:C2H2_and_C2HC_zinc_fingers; title=COCRYSTAL STRUCTURE OF SELECTED ZINC FINGER DIMER BOUND TO DNA organism=Mus musculus DNA sequence DA(E5001):DT(F6014) DT(E5002):DA(F6013) DG(E5003):DC(F6012) DG(E5004):DC(F6011) DG(E5005):DC(F6010) DC(E5006):DG(F6009) DG(E5007):DC(F6008) DC(E5008):DG(F6007) DG(E5009):DC(F6006) DC(E5010):DG(F6005) DC(E5011):DG(F6004) DC(E5012):DG(F6003) DA(E5013):DT(F6002) DT(E5014):DA(F6001) chainK ( 23) ARG5118 0 0 0 0 0 19 11 2 0 0 0 0 0 0 ( 25) ASP5120 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 26) GLU5121 0 0 0 0 4 5 0 0 0 0 0 0 0 0 ( 29) ARG5124 0 0 0 8 10 4 0 0 0 0 0 0 0 0 ( 51) ARG5146 0 0 15 10 2 0 0 0 0 0 0 0 0 0 ( 53) ASP5148 0 0 0 1 10 4 0 0 0 0 0 0 0 0 ( 54) HIS5149 0 14 11 0 0 0 0 0 0 0 0 0 0 0 chainL ( 26) ARG6118 0 0 0 0 0 0 2 13 24 0 0 0 0 0 ( 28) ASP6120 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 29) GLU6121 0 0 0 0 0 0 0 0 4 6 0 0 0 0 ( 32) ARG6124 0 0 0 0 0 0 0 0 4 11 5 0 0 0 ( 54) ARG6146 0 0 0 0 0 0 0 0 0 2 9 17 0 0 ( 56) ASP6148 0 0 0 0 0 0 0 0 3 5 2 0 0 0 ( 57) HIS6149 0 0 0 0 0 0 0 0 0 0 0 11 25 0 prot.sequence nyvvpkmrpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRsDHltthirtht/nllnyvvpkmrpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRsDHltthirtht >1f44_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF TRIMERIC CRE RECOMBINASE-LOX COMPLEX organism=Enterobacteria phage P1 DNA sequence DG(N5):DC(M16) DC(N6):DG(M15) DT(N7):DA(M14) DA(N8):DT(M13) DT(N9):DA(M12) DA(N10):DT(M11) DC(N11):DG(M10) DG(N12):DC(M9) DA(N13):DT(M8) DA(N14):DT(M7) DG(N15):DC(M6) DT(N16):DA(M5) DT(N17):DA(M4) DA(N18):DT(M3) DT(N19):DA(M2) chainA ( 21) HIS40 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 2 5 1 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 6 7 4 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (214) ARG241 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (216) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 (217) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 2 11 8 (230) SER257 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 (232) ARG259 0 0 0 0 0 0 13 14 8 2 0 0 0 0 0 (235) GLU262 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 (255) ARG282 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 (293) ILE320 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrgvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnIvmnfirnldsetgamvrlledgd >1f4k_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE REPLICATION TERMINATOR PROTEIN/B-SITE DNA COMPLEX organism=Bacillus subtilis DNA sequence DC(D1):DG(E21) DT(D2):DA(E20) DA(D3):DT(E19) DT(D4):DA(E18) DG(D5):DC(E17) DA(D6):DT(E16) DA(D7):DT(E15) DC(D8):DG(E14) DA(D9):DT(E13) DT(D10):DA(E12) DA(D11):DT(E11) DA(D12):DT(E10) DT(D13):DA(E9) DG(D14):DC(E8) DT(D15):DA(E7) DT(D16):DA(E6) DC(D17):DG(E5) DA(D18):DT(E4) DT(D19):DA(E3) DA(D20):DT(E2) DG(D21):DC(E1) chainA ( 9) ARG16 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 28) LEU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 ( 46) ASN53 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 ( 47) HIS54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 2 0 0 0 ( 48) THR55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 ( 49) GLU56 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 51) TYR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 ( 52) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 20 11 0 0 0 0 0 0 0 chainB ( 9) ARG16 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU35 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASN53 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) HIS54 0 0 0 5 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) THR55 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLU56 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TYR58 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG59 0 0 0 0 0 0 1 12 19 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stgflvkqRaflklymitmteqerlygLkllevlrsefkeigfkpNHTEvYRslhellddgilkqikvkkegaklqevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf/stgflvkqRaflklymitmteqerlygLkllevlrsefkeigfkpNHTEvYRslhellddgilkqikvkkegaklqevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf >1f4k_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE REPLICATION TERMINATOR PROTEIN/B-SITE DNA COMPLEX organism=Bacillus subtilis DNA sequence DC(D1):DG(E21) DT(D2):DA(E20) DA(D3):DT(E19) DT(D4):DA(E18) DG(D5):DC(E17) DA(D6):DT(E16) DA(D7):DT(E15) DC(D8):DG(E14) DA(D9):DT(E13) DT(D10):DA(E12) DA(D11):DT(E11) DA(D12):DT(E10) DT(D13):DA(E9) DG(D14):DC(E8) DT(D15):DA(E7) DT(D16):DA(E6) DC(D17):DG(E5) DA(D18):DT(E4) DT(D19):DA(E3) DA(D20):DT(E2) DG(D21):DC(E1) chainB ( 9) ARG16 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU35 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASN53 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) HIS54 0 0 0 5 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) THR55 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLU56 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TYR58 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG59 0 0 0 0 0 0 1 12 19 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stgflvkqRaflklymitmteqerlygLkllevlrsefkeigfkpNHTEvYRslhellddgilkqikvkkegaklqevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf >1f4r_A:FMT_C-terminal_domain-like; title=CRYSTAL STRUCTURE OF THE HUMAN AAG DNA REPAIR GLYCOSYLASE COMPLEXED WITH 1,N6-ETHENOADENINE-DNA organism=Homo sapiens DNA sequence DG(D1):DC(E25) DA(D2):DT(E24) DC(D3):DG(E23) DA(D4):DT(E22) DT(D5):DA(E21) DG(D6):DC(E20) EDA(D7):DT(E19) DT(D8):DA(E18) DT(D9):DA(E17) DG(D10):DC(E16) DC(D11):DG(E15) chainA ( 46) TYR127 0 0 0 0 0 0 51 0 0 0 0 ( 54) ALA135 0 0 0 0 0 0 2 0 0 0 0 ( 55) HIS136 0 0 0 0 0 0 19 0 0 0 0 ( 68) MET149 0 0 0 0 0 0 3 0 0 0 0 ( 76) TYR157 0 0 0 0 0 0 3 0 0 0 0 ( 78) TYR159 0 0 0 0 0 0 15 0 0 0 0 ( 81) TYR162 0 0 0 0 0 28 0 47 0 0 0 ( 83) MET164 0 0 0 0 0 0 1 6 0 0 0 ( 84) TYR165 0 0 0 0 0 0 0 5 2 0 0 ( 88) ASN169 0 0 0 0 0 0 10 0 0 0 0 ( 97) CYS178 0 0 0 0 0 0 2 0 0 0 0 ( 99) LEU180 0 0 0 0 0 0 8 0 0 0 0 prot.sequence hltrlgleffdqpavplaraflgqvlvrrlpngtelrgriveteaylgpedeaahsrggrqtprnrgmfmkpgtlyvyiiYgMYfcmnissqgdgacvllraleplegletmrqlrstvlkdrelcsgpsklcqalainksfdqrdlaqdeavwlergpavvaaarvgvghagewarkplrfyvrgspwvsvvdrvaeq >1f4s_P:Zn2/Cys6_DNA-binding_domain; title=STRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET DNA organism=EMERICELLA NIDULANS DNA sequence DC(A1):DG(B10) DG(A2):DC(B9) DT(A3):DA(B8) DG(A4):DC(B7) DC(A5):DG(B6) DG(A6):DC(B5) DG(A7):DC(B4) DA(A8):DT(B3) DT(A9):DA(B2) DC(A10):DG(B1) chainP ( 3) MET1 0 0 0 0 0 0 0 2 15 4 ( 7) ARG5 0 0 0 0 0 0 12 26 0 0 ( 8) ARG6 0 0 0 0 0 0 0 9 12 5 ( 18) ARG16 0 0 0 0 0 0 0 1 0 0 ( 21) LYS19 0 0 0 0 8 24 17 0 0 0 ( 22) ARG20 0 0 0 1 24 6 0 0 0 0 ( 23) ARG21 0 0 0 0 0 4 4 0 0 0 ( 46) ARG44 0 14 14 0 0 0 0 0 0 0 ( 47) TRP45 0 2 19 13 0 0 0 0 0 0 prot.sequence gsMadtRRrqnhscdpcRkgKRRcdapenrneanengwvscsnckRWnkdctfnwlssqrsknss >1f5e_P:Zn2/Cys6_DNA-binding_domain; title=STRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET DNA organism=EMERICELLA NIDULANS DNA sequence DC(A1):DG(B10) DG(A2):DC(B9) DT(A3):DA(B8) DG(A4):DC(B7) DC(A5):DG(B6) DG(A6):DC(B5) DG(A7):DC(B4) DA(A8):DT(B3) DT(A9):DA(B2) DC(A10):DG(B1) chainP ( 7) ARG5 0 0 0 0 0 0 18 36 0 0 ( 8) ARG6 0 0 0 0 0 0 0 8 20 3 ( 18) ARG16 0 0 0 0 0 0 0 2 0 0 ( 21) LYS19 0 0 0 0 8 21 16 0 0 0 ( 22) ARG20 0 0 0 3 25 7 0 0 0 0 ( 23) ARG21 0 0 0 0 0 3 4 0 0 0 ( 46) ARG44 0 6 12 1 0 0 0 0 0 0 ( 47) TRP45 0 2 19 13 0 0 0 0 0 0 prot.sequence gsmadtRRrqnhscdpcRkgKRRcdapenrneanengwvscsnckRWnkdctfnwlssqrsknss >1f5t_A:"Winged_helix"_DNA-binding_domain;Iron-dependent_repressor_protein,_dimerization_domain; title=DIPHTHERIA TOX REPRESSOR (C102D MUTANT) COMPLEXED WITH NICKEL AND DTXR CONSENSUS BINDING SEQUENCE organism=Corynebacterium diphtheriae DNA sequence DC(E297):DG(F438) DA(E298):DT(F437) DT(E299):DA(F436) DG(E300):DC(F435) DC(E301):DG(F434) DA(E302):DT(F433) DA(E303):DT(F432) DG(E304):DC(F431) DG(E305):DC(F430) DC(E306):DG(F429) DT(E307):DA(F428) DA(E308):DT(F427) DA(E309):DT(F426) DG(E310):DC(F425) DG(E311):DC(F424) DT(E312):DA(F423) DT(E313):DA(F422) DA(E314):DT(F421) DG(E315):DC(F420) DC(E316):DG(F419) DC(E317):DG(F418) DT(E318):DA(F417) DA(E319):DT(F416) DA(E320):DT(F415) DC(E321):DG(F414) DC(E322):DG(F413) DT(E323):DA(F412) DT(E324):DA(F411) DA(E325):DT(F410) DG(E326):DC(F409) DC(E327):DG(F408) DC(E328):DG(F407) DT(E329):DA(F406) DT(E330):DA(F405) DG(E331):DC(F404) DC(E332):DG(F403) DA(E333):DT(F402) DT(E334):DA(F401) DG(E335):DC(F400) DT(E336):DA(F399) DT(E337):DA(F398) chainA ( 36) SER1037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PRO1039 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR1040 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN1043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG1047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kdlvdttemylrtiyeleeegvtplrariaerleqSgPTvsQtvaRmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeadrwehvmsdeverrlvkvlk >1f5t_ABCD:"Winged_helix"_DNA-binding_domain;Iron-dependent_repressor_protein,_dimerization_domain; title=DIPHTHERIA TOX REPRESSOR (C102D MUTANT) COMPLEXED WITH NICKEL AND DTXR CONSENSUS BINDING SEQUENCE organism=Corynebacterium diphtheriae DNA sequence DC(E297):DG(F438) DA(E298):DT(F437) DT(E299):DA(F436) DG(E300):DC(F435) DC(E301):DG(F434) DA(E302):DT(F433) DA(E303):DT(F432) DG(E304):DC(F431) DG(E305):DC(F430) DC(E306):DG(F429) DT(E307):DA(F428) DA(E308):DT(F427) DA(E309):DT(F426) DG(E310):DC(F425) DG(E311):DC(F424) DT(E312):DA(F423) DT(E313):DA(F422) DA(E314):DT(F421) DG(E315):DC(F420) DC(E316):DG(F419) DC(E317):DG(F418) DT(E318):DA(F417) DA(E319):DT(F416) DA(E320):DT(F415) DC(E321):DG(F414) DC(E322):DG(F413) DT(E323):DA(F412) DT(E324):DA(F411) DA(E325):DT(F410) DG(E326):DC(F409) DC(E327):DG(F408) DC(E328):DG(F407) DT(E329):DA(F406) DT(E330):DA(F405) DG(E331):DC(F404) DC(E332):DG(F403) DA(E333):DT(F402) DT(E334):DA(F401) DG(E335):DC(F400) DT(E336):DA(F399) DT(E337):DA(F398) chainA ( 36) SER1037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PRO1039 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR1040 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN1043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG1047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 1) LYS2002 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER2037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PRO2039 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR2040 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER2042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN2043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG2047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 36) SER3037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PRO3039 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR3040 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER3042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN3043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG3047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) LYS4002 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER4037 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PRO4039 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR4040 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER4042 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN4043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG4047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kdlvdttemylrtiyeleeegvtplrariaerleqSgPTvsQtvaRmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeadrwehvmsdeverrlvkvlk/KdlvdttemylrtiyeleeegvtplrariaerleqSgPTvSQtvaRmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeadrwehvmsdeverrlvkvlk/kdlvdttemylrtiyeleeegvtplrariaerleqSgPTvSQtvaRmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeadrwehvmsdeverrlvkvlk/KdlvdttemylrtiyeleeegvtplrariaerleqSgPTvSQtvaRmerdglvvvasdrslqmtptgrtlatavmrkhrlaerlltdiigldinkvhdeadrwehvmsdeverrlvkvlk >1f66_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=2.6 A CRYSTAL STRUCTURE OF A NUCLEOSOME CORE PARTICLE CONTAINING THE VARIANT HISTONE H2A.Z organism=HOMO SAPIENS / XENOPUS LAEVIS / MUS MUSCULUS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 5) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 8) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) TYR641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 33) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 16) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 30) ARG1045 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/avsrsqraglqfpvgrihrhlkSrttshgrvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksli/ktrkesyaiyvykvlkqvhpdtGisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/gevkkphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/avsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksligkkg/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1f6o_A:FMT_C-terminal_domain-like; title=CRYSTAL STRUCTURE OF THE HUMAN AAG DNA REPAIR GLYCOSYLASE COMPLEXED WITH DNA organism=Homo sapiens DNA sequence DG(D1):DC(E25) DA(D2):DT(E24) DC(D3):DG(E23) DA(D4):DT(E22) DT(D5):DA(E21) DG(D6):DC(E20) YRR(D7):DT(E19) DT(D8):DA(E18) DT(D9):DA(E17) DG(D10):DC(E16) DC(D11):DG(E15) DC(D12):DG(E14) chainA ( 83) TYR162 0 0 0 0 0 38 1 45 0 0 0 0 ( 85) MET164 0 0 0 0 0 0 3 3 0 0 0 0 ( 86) TYR165 0 0 0 0 0 0 0 5 1 0 0 0 prot.sequence kghltrlgleffdqpavplaraflgqvlvrrlpngtelrgriveteaylgpedeaahsrggrqtprnrgmfmkpgtlyvyiiYgMYfcmnissqgdgacvllraleplegletmrqlrstlsrvlkdrelcsgpsklcqalainksfdqrdlaqdeavwlergplepsepavvaaarvgvghagewarkplrfyvrgspwvsvvdrvaeqd >1fiu_AB:Restriction_endonuclease-like; title=TETRAMERIC RESTRICTION ENDONUCLEASE NGOMIV IN COMPLEX WITH CLEAVED DNA organism=Neisseria gonorrhoeae DNA sequence DG(F2):DC(I11) DC(F3):DG(I10) DG(F4):DC(I9) DC(J5):DG(I8) DC(J6):DG(I7) DG(J7):DC(I6) DG(J8):DC(I5) DC(J9):DG(E4) DG(J10):DC(E3) DC(J11):DG(E2) chainA ( 34) ASP34 0 0 0 0 0 0 0 8 2 0 ( 36) SER36 0 0 0 0 0 0 0 6 4 0 ( 63) GLN63 0 1 7 8 0 0 0 0 0 0 (191) ARG191 0 0 0 0 0 14 16 11 0 0 (192) SER192 0 0 0 0 0 0 0 3 0 0 (193) ASP193 0 0 0 0 0 5 12 0 0 0 (194) ARG194 0 0 0 0 16 13 0 0 0 0 (227) ARG227 0 0 0 0 0 0 0 6 4 0 chainB ( 34) ASP34 0 4 9 0 0 0 0 0 0 0 ( 36) SER36 0 4 6 0 0 0 0 0 0 0 ( 63) GLN63 0 0 0 0 0 0 8 7 1 0 (191) ARG191 0 0 11 17 13 0 0 0 0 0 (192) SER192 0 0 3 0 0 0 0 0 0 0 (193) ASP193 0 0 0 12 5 0 0 0 0 0 (194) ARG194 0 0 0 0 13 16 0 0 0 0 (227) ARG227 0 5 6 0 0 0 0 0 0 0 prot.sequence mqplftqerrifhkklldgnilatnnrgvvsnaDgSntrsfniakgiadllhsetvserlpgQtsgnafeaicsefvqsafeklqhirpgdwnvkqvgsrnrleiaryqqyahltalakaaeenpelaaalgsdytitpdiivtrnliadaeinrneflvdeniatyaslragngnmpllhasisckwtiRSDRaqnarseglnlvrnrkgrlphivvvtaeptpsRissialgtgeidcvyhfalyeleqilqslnyedaldlfyimvngkrlkdisdlpldlav/mqplftqerrifhkklldgnilatnnrgvvsnaDgSntrsfniakgiadllhsetvserlpgQtsgnafeaicsefvqsafeklqhirpgdwnvkqvgsrnrleiaryqqyahltalakaaeenpelaaalgsdytitpdiivtrnliadaeinrneflvdeniatyaslragngnmpllhasisckwtiRSDRaqnarseglnlvrnrkgrlphivvvtaeptpsRissialgtgeidcvyhfalyeleqilqslnyedaldlfyimvngkrlkdisdlpldlav >1fiu_B:Restriction_endonuclease-like; title=TETRAMERIC RESTRICTION ENDONUCLEASE NGOMIV IN COMPLEX WITH CLEAVED DNA organism=Neisseria gonorrhoeae DNA sequence DG(E2):DC(J11) DC(E3):DG(J10) DG(E4):DC(J9) DC(I5):DG(J8) DC(I6):DG(J7) DG(I7):DC(J6) DG(I8):DC(J5) DC(I9):DG(F4) DG(I10):DC(F3) DC(I11):DG(F2) chainB ( 34) ASP34 0 0 0 0 0 0 0 9 4 0 ( 36) SER36 0 0 0 0 0 0 0 6 4 0 ( 63) GLN63 0 1 7 8 0 0 0 0 0 0 (191) ARG191 0 0 0 0 0 13 17 11 0 0 (192) SER192 0 0 0 0 0 0 0 3 0 0 (193) ASP193 0 0 0 0 0 5 12 0 0 0 (194) ARG194 0 0 0 0 16 13 0 0 0 0 (227) ARG227 0 0 0 0 0 0 0 6 5 0 prot.sequence mqplftqerrifhkklldgnilatnnrgvvsnaDgSntrsfniakgiadllhsetvserlpgQtsgnafeaicsefvqsafeklqhirpgdwnvkqvgsrnrleiaryqqyahltalakaaeenpelaaalgsdytitpdiivtrnliadaeinrneflvdeniatyaslragngnmpllhasisckwtiRSDRaqnarseglnlvrnrkgrlphivvvtaeptpsRissialgtgeidcvyhfalyeleqilqslnyedaldlfyimvngkrlkdisdlpldlav >1fiu_CD:Restriction_endonuclease-like; title=TETRAMERIC RESTRICTION ENDONUCLEASE NGOMIV IN COMPLEX WITH CLEAVED DNA organism=Neisseria gonorrhoeae DNA sequence DG(G2):DC(L11) DC(G3):DG(L10) DG(G4):DC(L9) DC(K5):DG(L8) DC(K6):DG(L7) DG(K7):DC(L6) DG(K8):DC(L5) DC(K9):DG(H4) DG(K10):DC(H3) DC(K11):DG(H2) chainC ( 34) ASP34 0 0 0 0 0 0 0 9 3 0 ( 36) SER36 0 0 0 0 0 0 0 6 4 0 ( 63) GLN63 0 5 7 8 0 0 0 0 0 0 (191) ARG191 0 0 0 0 0 14 16 11 0 0 (192) SER192 0 0 0 0 0 0 0 3 0 0 (193) ASP193 0 0 0 0 0 5 12 0 0 0 (194) ARG194 0 0 0 0 16 12 0 0 0 0 (227) ARG227 0 0 0 0 0 0 0 5 4 0 chainD ( 34) ASP34 0 0 10 0 0 0 0 0 0 0 ( 36) SER36 0 0 4 0 0 0 0 0 0 0 ( 63) GLN63 0 0 0 0 0 0 8 7 2 0 (191) ARG191 0 0 10 17 12 0 0 0 0 0 (192) SER192 0 0 3 0 0 0 0 0 0 0 (193) ASP193 0 0 0 12 5 0 0 0 0 0 (194) ARG194 0 0 0 0 12 17 0 0 0 0 (227) ARG227 0 5 5 0 0 0 0 0 0 0 prot.sequence mqplftqerrifhkklldgnilatnnrgvvsnaDgSntrsfniakgiadllhsetvserlpgQtsgnafeaicsefvqsafeklqhirpgdwnvkqvgsrnrleiaryqqyahltalakaaeenpelaaalgsdytitpdiivtrnliadaeinrneflvdeniatyaslragngnmpllhasisckwtiRSDRaqnarseglnlvrnrkgrlphivvvtaeptpsRissialgtgeidcvyhfalyeleqilqslnyedaldlfyimvngkrlkdisdlpldlav/mqplftqerrifhkklldgnilatnnrgvvsnaDgSNtrsfniakgiadllhsetvserlpgQtsgnafeaicsefvqsafeklqhirpgdwnvkqvgsrnrleiaryqqyahltalakaaeenpelaaalgsdytitpdiivtrnliadaeinrneflvdeniatyaslragngnmpllhasisckwtiRSDRaqnarseglnlvrnrkgrlphivvvtaeptpsRissialgtgeidcvyhfalyeleqilqslnyedaldlfyimvngkrlkdisdlpldlav >1fjl_B:Homeodomain-like; title=HOMEODOMAIN FROM THE DROSOPHILA PAIRED PROTEIN BOUND TO A DNA OLIGONUCLEOTIDE organism=Drosophila melanogaster DNA sequence DA(D2):DT(E14) DT(D3):DA(E13) DA(D4):DT(E12) DA(D5):DT(E11) DT(D6):DA(E10) DC(D7):DG(E9) DT(D8):DA(E8) DG(D9):DC(E7) DA(D10):DT(E6) DT(D11):DA(E5) DT(D12):DA(E4) DA(D13):DT(E3) DC(D14):DG(E2) chainB ( 2) ARG2 0 0 0 0 0 0 0 0 0 8 9 0 0 ( 5) ARG5 0 0 0 0 0 0 0 0 0 0 5 10 13 ( 47) VAL47 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 50) GLN50 0 0 0 0 0 0 4 0 1 0 0 0 0 ( 51) ASN51 0 0 0 0 0 0 0 0 1 10 6 0 0 prot.sequence qRrsRttfsasqldelerafertqypdiytreelaqrtnlteariqVwfQNrrarlrk >1fjx_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF TERNARY COMPLEX OF HHAI METHYLTRANSFERASE MUTANT (T250G) IN COMPLEX WITH DNA AND ADOHCY organism=HAEMOPHILUS HAEMOLYTICUS DNA sequence DG(C402):DC(D433) DA(C403):DT(D432) DT(C404):DA(D431) DA(C405):DT(D430) DG(C406):DC(D429) DC(C407):DG(D428) DC(C409):DG(D426) DT(C410):DA(D425) DA(C411):DT(D424) DT(C412):DA(D423) DC(C413):DG(D422) chainA ( 86) ILE86 0 0 0 0 0 0 1 5 1 0 0 ( 87) SER87 0 0 0 0 0 8 8 0 0 0 0 (228) ARG228 0 0 0 0 0 0 0 2 0 0 0 (237) GLN237 0 0 0 0 0 26 30 0 0 0 0 (239) GLU239 0 0 0 0 1 3 0 0 0 0 0 (240) ARG240 0 0 0 0 0 0 8 11 0 0 0 (254) TYR254 0 0 0 0 1 0 0 0 0 0 0 (260) ALA260 0 0 0 1 0 0 0 0 0 0 0 (296) SER296 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgERiystrgiaiglsaYgggifAktggylvngktrklhprecarvmgypdsykvhpstSqaykqfgnsvvinvlqyiaynigsslnfkpy >1flo_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=FLP RECOMBINASE-HOLLIDAY JUNCTION COMPLEX I organism=Saccharomyces cerevisiae DNA sequence DA(E-16):DT(F16) DA(E-15):DT(F15) DG(E-14):DC(F14) DT(E-13):DA(F13) DT(E-12):DA(F12) DC(E-11):DG(F11) DC(E-10):DG(F10) DT(E-9):DA(F9) DA(E-8):DT(F8) DT(E-7):DA(F7) DT(E-6):DA(F6) DC(E-5):DG(F5) DT(J-3):DA(F4) DT(J-2):DA(F3) DT(J-1):DA(F2) chainA ( 54) ALA55 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 55) THR56 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 59) TYR60 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 61) THR62 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 81) LYS82 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 (159) ARG170 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) LYS223 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 (267) ASN278 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (270) ARG281 0 0 0 1 7 15 21 0 0 0 0 0 0 0 0 (271) SER282 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (274) LYS285 0 0 2 8 1 0 0 0 0 0 0 0 0 0 0 prot.sequence pqfdilcktppkvlvrqfverferpsgekialcaaeltylcwmithngtaikrATfmSYnTiisnslsfdivnkslqfkyKtqkatileaslkklipaweftiipyysditdivsslqlqfeskgnshskkmlkallsegesiweitekilnsfeytsRftktktlyqflflatfincgrfsdiknvdpksfklvqnkylgviiqclvtetKtsvsrhiyffsargridplvyldeflrnsepvlkrvnrtgnsssnkqeyqllkdNlvRSynKalkknapysifaikngpkshigrhlmtsflsmkglteltnvvgnwsdkttythqitaipdhyfalvsryyaydpiskemialkdetnpieewqhieqlkgsaegsirypawngiisqevldylssyinrri >1fn7_A:DNA-glycosylase;TATA-box_binding_protein-like; title=COUPLING OF DAMAGE RECOGNITION AND CATALYSIS BY A HUMAN BASE-EXCISION DNA REPAIR PROTEIN organism=Homo sapiens DNA sequence DG(D16):DC(C15) DC(D17):DG(C14) DG(D18):DC(C13) DT(D19):DA(C12) DC(D20):DG(C11) DC(D21):DG(C10) DA(D22):DT(C9) 3DR(D23):DC(C8) DG(D24):DC(C7) DT(D25):DA(C6) DC(D26):DG(C5) DT(D27):DA(C4) DA(D28):DT(C3) DC(D29):DG(C2) DC(D30):DG(C1) chainA (138) ASN149 0 0 0 0 0 0 12 5 36 0 0 0 0 0 0 (139) ASN150 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (140) ASN151 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 (143) ARG154 0 0 0 0 0 0 28 10 0 0 0 0 0 0 0 (192) TYR203 0 0 0 0 0 0 0 17 10 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficssNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRaryvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwgpyagwaqavlfsadlrq >1fok_A:Restriction_endonuclease-like;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF RESTRICTION ENDONUCLEASE FOKI BOUND TO DNA organism=PLANOMICROBIUM OKEANOKOITES DNA sequence DT(C922):DA(B920) DG(C923):DC(B919) DA(C924):DT(B918) DC(C925):DG(B917) DT(C926):DA(B916) DA(C927):DT(B915) DG(C928):DC(B914) DC(C929):DG(B913) DG(C930):DC(B912) DT(C931):DA(B911) DT(C932):DA(B910) DA(C933):DT(B909) DT(C934):DA(B908) DC(C935):DG(B907) DA(C936):DT(B906) DT(C937):DA(B905) DC(C938):DG(B904) DC(C939):DG(B903) DG(C940):DC(B902) chainA ( 9) GLN12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 8 0 0 0 ( 10) ASN13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 17 0 0 ( 76) ARG79 0 0 0 0 0 0 0 0 0 0 0 0 2 16 6 0 0 0 0 ( 92) GLN95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 (100) ASP103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (101) ASN104 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (102) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 7 21 9 3 0 0 0 (214) ASN217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 (215) ASN218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 (217) GLU220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 (219) SER222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (222) LYS225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 1 0 (225) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 4 (226) MET229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence kirtfgwvQNpgkfenlkrvvqvfdrnskvhnevknikiptlvkeskiqkelvaimnqhdliytykelvgtgtsiRseapcdaiiqatiadQgnkkgyiDNWssdgflrwahalgfieyinksdsfvitdvglaysksadgsaiekeilieaissyppairiltlledgqhltkfdlgknlgfsgesgftslpegilldtlanampkdkgeirNNwEgSsdKyaRMiggwldklglvkqgkkefiiptpdnkefishafkitgeglkvlrrakgsvpkrvywemlatnltdkeyvrtrralileilikagslkieqiqdnlkklgfdevietiendikglintgifieikgrfyqlkdhilqfvipnrgvtkqlvkseleekkselrhklkyvpheyielieiarnstqdrilemkvmeffmkvygyrgkhlggsrkpdgaiytvgspidygvivdtkaysggynlpigqademqryveenqtrnkhinpnewwkvypssvtefkflfvsghfkgnykaqltrlnhitncngavlsveelliggemikagtltleevrrkfnngeinf >1fos_EF:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=TWO HUMAN C-FOS:C-JUN:DNA COMPLEXES organism=HOMO SAPIENS DNA sequence DA(A2):DT(B40) DT(A3):DA(B39) DG(A4):DC(B38) DG(A5):DC(B37) DA(A6):DT(B36) DT(A7):DA(B35) DG(A8):DC(B34) DA(A9):DT(B33) DG(A10):DC(B32) DT(A11):DA(B31) DC(A12):DG(B30) DA(A13):DT(B29) DT(A14):DA(B28) DA(A15):DT(B27) DG(A16):DC(B26) DG(A17):DC(B25) DA(A18):DT(B24) DG(A19):DC(B23) DA(A20):DT(B22) chainE ( 9) ASN147 0 0 0 0 0 0 0 0 0 2 5 8 1 0 0 0 0 0 0 ( 12) ALA150 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 13) ALA151 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 17) ARG155 0 0 0 0 0 0 0 15 9 1 0 0 0 0 0 0 0 0 0 chainF ( 6) ASN271 0 0 0 0 1 2 5 3 0 0 0 0 0 0 0 0 0 0 0 ( 9) ALA274 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ALA275 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 14) ARG279 0 0 0 0 0 0 0 4 11 7 0 0 0 0 0 0 0 0 0 prot.sequence krrirrerNkmAAaksRnrrreltdtlqaetdqledeksalqteianllkekeklefila/rkrmrNriAAsksRkrkleriarleekvktlkaqnselastanmlreqvaqlkqkvm >1fos_GH:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=TWO HUMAN C-FOS:C-JUN:DNA COMPLEXES organism=HOMO SAPIENS DNA sequence DA(C2):DT(D40) DT(C3):DA(D39) DG(C4):DC(D38) DG(C5):DC(D37) DA(C6):DT(D36) DT(C7):DA(D35) DG(C8):DC(D34) DA(C9):DT(D33) DG(C10):DC(D32) DT(C11):DA(D31) DC(C12):DG(D30) DA(C13):DT(D29) DT(C14):DA(D28) DA(C15):DT(D27) DG(C16):DC(D26) DG(C17):DC(D25) DA(C18):DT(D24) DG(C19):DC(D23) DA(C20):DT(D22) chainG ( 4) ARG143 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ASN147 0 0 0 0 2 9 6 3 0 0 0 0 0 0 0 0 0 0 0 ( 11) ALA150 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ALA151 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG155 0 0 0 0 0 0 0 0 6 16 0 0 0 0 0 0 0 0 0 chainH ( 7) ASN271 0 0 0 0 0 0 0 0 0 5 8 2 1 0 0 0 0 0 0 ( 10) ALA274 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 11) ALA275 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 14) SER278 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 15) ARG279 0 0 0 0 0 0 0 15 12 4 0 0 0 0 0 0 0 0 0 prot.sequence rriRrerNkmAAaksRnrrreltdtlqaetdqledeksalqteianllkekeklefila/erkrmrNriAAskSRkrkleriarleekvktlkaqnselastanmlreqvaqlkqkvm >1fos_H:Leucine_zipper_domain;A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=TWO HUMAN C-FOS:C-JUN:DNA COMPLEXES organism=HOMO SAPIENS DNA sequence DT(D22):DA(C20) DC(D23):DG(C19) DT(D24):DA(C18) DC(D25):DG(C17) DC(D26):DG(C16) DT(D27):DA(C15) DA(D28):DT(C14) DT(D29):DA(C13) DG(D30):DC(C12) DA(D31):DT(C11) DC(D32):DG(C10) DT(D33):DA(C9) DC(D34):DG(C8) DA(D35):DT(C7) DT(D36):DA(C6) DC(D37):DG(C5) DC(D38):DG(C4) DA(D39):DT(C3) DT(D40):DA(C2) chainH ( 7) ASN271 0 0 0 0 0 0 1 2 8 5 0 0 0 0 0 0 0 0 0 ( 10) ALA274 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 11) ALA275 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 14) SER278 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG279 0 0 0 0 0 0 0 0 0 4 12 15 0 0 0 0 0 0 0 prot.sequence erkrmrNriAAskSRkrkleriarleekvktlkaqnselastanmlreqvaqlkqkvm >1fw6_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF A TAQ MUTS-DNA-ADP TERNARY COMPLEX organism=Thermus aquaticus DNA sequence DC(C1902):DG(D1972) DG(C1903):DC(D1971) DA(C1904):DT(D1970) DC(C1905):DG(D1969) DG(C1906):DC(D1968) DC(C1907):DG(D1967) DT(C1908):DA(D1966) DA(C1909):DT(D1965) DG(C1910):DC(D1964) DC(C1911):DG(D1963) DG(C1912):DC(D1962) DG(C1914):DC(D1961) DC(C1915):DG(D1960) DG(C1916):DC(D1959) DG(C1917):DC(D1958) DC(C1918):DG(D1957) DT(C1919):DA(D1956) DC(C1920):DG(D1955) DG(C1921):DC(D1954) DT(C1922):DA(D1953) DC(C1923):DG(D1952) chainA ( 39) PHE39 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 chainB prot.sequence megmlkgegpgplppllqqyvelrdqypdylllfqvgdFyecfgedaerlaralglvlthktskdfttpmagiplrafeayaerllkmgfrlavadqvepaeeaeglvrrevtqlltpgtllqesllpreanylaaiatgdgwglafldvstgefkgtvlksksalydelfrhrpaevllapellengafldefrkrfpvmlseapfepegegplalrrargallayaqrtqggalslqpfrfydpgafmrlpeatlralevfeplrgqdtlfsvldetrtapgrrllqswlrhplldrgplearldrvegfvregalregvrrllyrladlerlatrlelgraspkdlgalrrslqilpelrallgeevglpdlsplkeeleaalvedpplkvseggliregydpdldalraahregvayfleleererertgiptlkvgynavfgyylevtrpyyervpkeyrpvqtlkdrqrytlpemkekerevyrlealirrreeevflevrerakrqaealreaarilaeldvyaalaevavrygyvrprfgdrlqiragrhpvverrtefvpndlemahelvlitgpnmagkstflrqtaliallaqvgsfvpaeeahlplfdgiytrigagkstfmvemeevalilkeatenslvlldevgrgtssldgvaiatavaealherraytlfathyfeltalglprlknlhvaareeagglvfyhqvlpgpasksygvevaamaglpkevvararallqamaar/megmlkgegpgplppllqqyvelrdqypdylllfqvgdFyecfgedaerlaralglvlthktskdfttpmagiplrafeayaerllkmgfrlavadqvepvrrevtqlltpgtllqesllpreanylaaiatgdgwglafldvstgefkgtvlksksalydelfrhrpaevllapellengafldefrkrfpvmlseapfepegegplalrrargallayaqrtqggalslqpfrfydpgafmrlpeatlralevfeplrgqdtlfsvldetrtapgrrllqswlrhplldrgplearldrvegfvregalregvrrllyrladlerlatrlelgraspkdlgalrrslqilpelrallgeevglpdlsplkeeleaalvedpplkvseggliregydpdldalraahregvayfleleererertgiptlkvgynavfgyylevtrpyyervpkeyrpvqtlkdrqrytlpemkekerevyrlealirrreeevflevrerakrqaealreaarilaeldvyaalaevavrygyvrprfgdrlqiragrhpvverrtefvpndlemahelvlitgpnmagkstflrqtaliallaqvgsfvpaeeahlplfdgiytrigagkstfmvemeevalilkeatenslvlldevgrgtssldgvaiatavaealherraytlfathyfeltalglprlknlhvaareeagglvfyhqvlpgpasksygvevaamaglpkevvararallqam >1g2d_F:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (CLONE #2) organism=Mus musculus DNA sequence DG(D52):DC(E82) DA(D53):DT(E81) DC(D54):DG(E80) DG(D55):DC(E79) DC(D56):DG(E78) DT(D57):DA(E77) DA(D58):DT(E76) DT(D59):DA(E75) DA(D60):DT(E74) DA(D61):DT(E73) DA(D62):DT(E72) DA(D63):DT(E71) DG(D64):DC(E70) DG(D65):DC(E69) DA(D66):DT(E68) chainF ( 18) GLN218 0 0 0 0 0 0 0 0 0 0 6 10 1 0 0 ( 20) THR220 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 ( 21) ASN221 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 ( 46) GLN246 0 0 0 0 0 0 0 16 11 2 0 0 0 0 0 ( 47) HIS247 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 ( 48) THR248 0 0 0 0 0 0 0 3 10 7 0 0 0 0 0 ( 52) GLN252 0 0 0 0 0 9 10 2 0 0 0 0 0 0 0 ( 74) THR274 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 75) LEU275 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 76) HIS276 0 0 0 0 8 16 9 0 0 0 0 0 0 0 0 ( 77) THR277 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 ( 79) ASP279 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 80) ARG280 0 0 20 11 10 0 0 0 0 0 0 0 0 0 0 prot.sequence merpyacpvescdrrfsQkTNldthirihtgqkpfqcricmrnfsQHTglnQhirthtgekpfacdicgrkfaTLHTrDRhtkihlrq >1g2f_F:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (TATAZF;CLONE #6) organism=Mus musculus DNA sequence DT(E68):DA(D66) DC(E69):DG(D65) DC(E70):DG(D64) DT(E71):DA(D63) DT(E72):DA(D62) DT(E73):DA(D61) DT(E74):DA(D60) DA(E75):DT(D59) DT(E76):DA(D58) DA(E77):DT(D57) DG(E78):DC(D56) DC(E79):DG(D55) DG(E80):DC(D54) DT(E81):DA(D53) DC(E82):DG(D52) chainF ( 17) GLN218 0 0 2 12 7 0 0 0 0 0 0 0 0 0 0 ( 19) THR220 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 ( 20) ASN221 0 0 0 0 11 10 0 0 0 0 0 0 0 0 0 ( 44) SER245 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 45) GLN246 0 0 0 0 0 2 11 15 0 0 0 0 0 0 0 ( 46) GLN247 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 47) ALA248 0 0 0 0 0 3 3 1 0 0 0 0 0 0 0 ( 48) SER249 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 50) ASN251 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 51) ALA252 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 73) THR274 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 74) LEU275 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 ( 75) HIS276 0 0 0 0 0 0 0 0 11 17 7 0 0 0 0 ( 76) THR277 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 ( 79) ARG280 0 0 0 0 0 0 0 0 0 0 9 12 20 0 0 prot.sequence erpyacpvescdrrfsQkTNldthirihtgqkpfqcricmrnfsQqaSlnahirthtgekpfacdicgrkfaTlHTrtRhtkihlrq >1g38_A:DNA_methylase_specificity_domain;S-adenosyl-L-methionine-dependent_methyltransferases; title=ADENINE-SPECIFIC METHYLTRANSFERASE M. TAQ I/DNA COMPLEX organism=Thermus aquaticus DNA sequence DG(B601):DC(C710) DT(B602):DA(C709) DT(B603):6MA(C708) DC(B604):DG(C707) DG(B605):DC(C706) DA(B606):DT(C705) DT(B607):DA(C704) DG(B608):DC(C703) DT(B609):DA(C702) DC(B610):DG(C701) chainA ( 1) VAL21 0 0 0 0 0 8 0 0 0 0 ( 85) ASN105 0 0 0 0 0 10 0 0 0 0 ( 88) TYR108 0 0 0 0 0 50 0 0 0 0 ( 96) LYS116 0 0 0 6 12 0 0 0 0 0 ( 97) TYR117 0 0 6 5 0 0 0 0 0 0 (119) LYS139 0 0 7 5 0 0 0 0 0 0 (176) PHE196 0 0 0 0 0 12 0 0 0 0 (179) LYS199 0 0 0 0 0 7 0 0 0 0 (180) LYS200 0 0 0 0 0 0 18 8 3 0 (181) VAL201 0 0 0 0 0 1 0 0 0 0 (248) PHE268 0 0 4 0 0 0 0 0 0 0 (251) ARG271 0 10 15 10 6 0 0 0 0 0 (252) SER272 0 0 0 3 0 0 0 0 0 0 (253) PRO273 0 0 2 1 0 0 0 0 0 0 (254) GLU274 0 1 0 0 0 0 0 0 0 0 (276) ARG296 0 0 0 0 0 0 0 2 0 0 (303) ARG323 0 1 0 0 0 0 0 0 0 0 (315) HIS335 0 0 0 4 0 0 0 0 0 0 (316) THR336 0 0 0 0 4 3 2 0 0 0 (333) ARG353 0 0 0 0 2 0 0 0 0 0 (334) GLU354 0 0 0 0 18 0 0 0 0 0 (373) PRO393 0 0 0 0 4 2 11 0 0 0 (374) HIS394 0 0 0 4 22 2 0 0 0 0 prot.sequence VetppevvdfmvslaeaprggrvlepacahgpflrafreahgtgyrfvgveidpkaldlppwaegiladfllwepgeafdlilgNppYgivgeasKYpihvfkavkdlykkafstwkgKynlygaflekavrllkpggvlvfvvpatwlvledfallreflaregktsvyylgevFpqKKVsavvirfqksgkglslwdtqesesgftpilwaeyphwegeiirfeteetrkleisgmplgdlfhirFaaRSPEfkkhpavrkepgpglvpvltgRnlkpgwvdyeknhsglwmpkerakelRdfyatphlvvaHTkgtrvvaawderaypwREefhllpkegvrldpsslvqwlnseamqkhvrtlyrdfvPHltlrmlerlpvrreygfht >1g4d_A:Putative_DNA-binding_domain; title=NMR STRUCTURE OF THE MU BACTERIOPHAGE REPRESSOR DNA-BINDING DOMAIN/DNA COMPLEX organism=ENTEROBACTERIA PHAGE MU DNA sequence DC(B102):DG(C135) DC(B103):DG(C134) DT(B104):DA(C133) DT(B105):DA(C132) DT(B106):DA(C131) DT(B107):DA(C130) DC(B108):DG(C129) DA(B109):DT(C128) DG(B110):DC(C127) DT(B111):DA(C126) DA(B112):DT(C125) DA(B113):DT(C124) DT(B114):DA(C123) DC(B115):DG(C122) DT(B116):DA(C121) DG(B117):DC(C120) chainA ( 19) SER31 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ALA33 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 24) HIS36 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 25) TYR37 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) LYS53 0 0 0 0 0 0 0 0 1 6 7 2 0 0 0 0 ( 44) LYS56 0 0 0 0 0 0 7 8 5 0 0 0 0 0 0 0 prot.sequence ksiwcspqeimaadgmpgSvAgvHYranvqgwtkrkkegvKggKaveydvmsmptkereqviahlglst >1g9y_A:Homing_endonucleases; title=HOMING ENDONUCLEASE I-CREI / DNA SUBSTRATE COMPLEX WITH CALCIUM organism=Chlamydomonas reinhardtii DNA sequence DC(C401):DG(D524) DG(C402):DC(D523) DA(C403):DT(D522) DA(C404):DT(D521) DA(C405):DT(D520) DC(C406):DG(D519) DT(C407):DA(D518) DG(C408):DC(D517) DT(C409):DA(D516) DC(C410):DG(D515) DT(C411):DA(D514) DC(C412):DG(D513) DA(C413):DT(D512) DC(C414):DG(D511) DG(C415):DC(D510) DA(C416):DT(D509) DC(C417):DG(D508) DG(C418):DC(D507) DT(C419):DA(D506) DT(C420):DA(D505) DT(C421):DA(D504) DT(C422):DA(D503) DG(C423):DC(D502) DC(C424):DG(D501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 12 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 9 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 16 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >1g9y_AB:Homing_endonucleases; title=HOMING ENDONUCLEASE I-CREI / DNA SUBSTRATE COMPLEX WITH CALCIUM organism=Chlamydomonas reinhardtii DNA sequence DG(D501):DC(C424) DC(D502):DG(C423) DA(D503):DT(C422) DA(D504):DT(C421) DA(D505):DT(C420) DA(D506):DT(C419) DC(D507):DG(C418) DG(D508):DC(C417) DT(D509):DA(C416) DC(D510):DG(C415) DG(D511):DC(C414) DT(D512):DA(C413) DG(D513):DC(C412) DA(D514):DT(C411) DG(D515):DC(C410) DA(D516):DT(C409) DC(D517):DG(C408) DA(D518):DT(C407) DG(D519):DC(C406) DT(D520):DA(C405) DT(D521):DA(C404) DT(D522):DA(C403) DC(D523):DG(C402) DG(D524):DC(C401) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 12 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 3 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 9 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 16 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB ( 21) SER222 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE224 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN226 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS228 0 0 0 0 3 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN230 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER232 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR233 0 21 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN238 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN244 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR246 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR266 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG268 0 0 0 0 0 0 10 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG270 0 0 0 0 0 0 0 0 15 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL273 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS339 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR340 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgSVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >1g9z_A:Homing_endonucleases; title=LAGLIDADG HOMING ENDONUCLEASE I-CREI / DNA PRODUCT COMPLEX WITH MAGNESIUM organism=Chlamydomonas reinhardtii DNA sequence DG(C501):DC(F624) DC(C502):DG(F623) DA(C503):DT(F622) DA(C504):DT(F621) DA(C505):DT(F620) DA(C506):DT(F619) DC(C507):DG(F618) DG(C508):DC(F617) DT(C509):DA(F616) DC(C510):DG(F615) DG(C511):DC(E614) DT(C512):DA(E613) DG(C513):DC(E612) DA(C514):DT(E611) DG(D515):DC(E610) DA(D516):DT(E609) DC(D517):DG(E608) DA(D518):DT(E607) DG(D519):DC(E606) DT(D520):DA(E605) DT(D521):DA(E604) DT(D522):DA(E603) DC(D523):DG(E602) DG(D524):DC(E601) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 15 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 5 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 10 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 14 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgSVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >1g9z_AB:Homing_endonucleases; title=LAGLIDADG HOMING ENDONUCLEASE I-CREI / DNA PRODUCT COMPLEX WITH MAGNESIUM organism=Chlamydomonas reinhardtii DNA sequence DG(C501):DC(F624) DC(C502):DG(F623) DA(C503):DT(F622) DA(C504):DT(F621) DA(C505):DT(F620) DA(C506):DT(F619) DC(C507):DG(F618) DG(C508):DC(F617) DT(C509):DA(F616) DC(C510):DG(F615) DG(C511):DC(E614) DT(C512):DA(E613) DG(C513):DC(E612) DA(C514):DT(E611) DG(D515):DC(E610) DA(D516):DT(E609) DC(D517):DG(E608) DA(D518):DT(E607) DG(D519):DC(E606) DT(D520):DA(E605) DT(D521):DA(E604) DT(D522):DA(E603) DC(D523):DG(E602) DG(D524):DC(E601) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 15 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 5 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 10 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 14 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 chainB ( 21) SER222 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE224 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN226 0 0 0 0 0 1 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS228 0 0 0 0 2 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN230 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER232 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR233 0 22 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN238 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN244 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR246 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG268 0 0 0 0 0 0 7 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG270 0 0 0 0 0 0 0 0 16 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL273 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS339 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR340 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgSVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >1ga5_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA- BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT organism=Homo sapiens DNA sequence DC(C600):DG(D640) DA(C601):5IU(D639) DA(C602):DT(D638) DC(C603):DG(D637) DT(C604):DA(D636) DA(C605):DT(D635) DG(C606):DC(D634) DG(C607):DC(D633) DT(C608):DA(D632) DC(C609):DG(D631) DA(C610):DT(D630) DC(C611):DG(D629) DT(C612):DA(D628) DA(C613):DT(D627) DG(C614):DC(D626) DG(C615):DC(D625) DT(C616):DA(D624) DC(C617):DG(D623) DA(C618):DT(D622) DG(C619):DC(D621) chainA ( 22) GLU19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 ( 25) LYS22 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 2 0 0 0 0 ( 29) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 ( 30) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 ( 77) PHE73 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 ( 79) ARG75 0 0 0 0 0 0 0 0 8 0 1 0 0 0 0 0 0 0 0 0 chainB ( 15) HIS12 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU19 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS22 0 0 0 0 0 6 7 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG26 0 0 0 0 0 0 6 9 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG27 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 ( 77) PHE73 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vllckvcgdvasgfhygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrFgRipk/vllckvcgdvasgfHygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrFgr >1ga5_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA- BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT organism=Homo sapiens DNA sequence DC(C600):DG(D640) DA(C601):5IU(D639) DA(C602):DT(D638) DC(C603):DG(D637) DT(C604):DA(D636) DA(C605):DT(D635) DG(C606):DC(D634) DG(C607):DC(D633) DT(C608):DA(D632) DC(C609):DG(D631) DA(C610):DT(D630) DC(C611):DG(D629) DT(C612):DA(D628) DA(C613):DT(D627) DG(C614):DC(D626) DG(C615):DC(D625) DT(C616):DA(D624) DC(C617):DG(D623) DA(C618):DT(D622) DG(C619):DC(D621) chainB ( 15) HIS12 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU19 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS22 0 0 0 0 0 6 7 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG26 0 0 0 0 0 0 6 9 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG27 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 ( 77) PHE73 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vllckvcgdvasgfHygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrFgr >1ga5_EF:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA- BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT organism=Homo sapiens DNA sequence DC(G600):DG(H640) DA(G601):5IU(H639) DA(G602):DT(H638) DC(G603):DG(H637) DT(G604):DA(H636) DA(G605):DT(H635) DG(G606):DC(H634) DG(G607):DC(H633) DT(G608):DA(H632) DC(G609):DG(H631) DA(G610):DT(H630) DC(G611):DG(H629) DT(G612):DA(H628) DA(G613):DT(H627) DG(G614):DC(H626) DG(G615):DC(H625) DT(G616):DA(H624) DC(G617):DG(H623) DA(G618):DT(H622) DG(G619):DC(H621) chainE ( 22) GLU19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 8 0 0 0 ( 25) LYS22 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 1 0 0 0 0 ( 29) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 ( 30) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 0 ( 77) PHE73 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 79) ARG75 0 0 0 0 0 0 0 0 9 2 1 0 0 0 0 0 0 0 0 0 chainF ( 22) GLU19 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS22 0 0 0 0 0 5 9 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG26 0 0 0 0 0 0 4 7 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG27 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 ( 77) PHE73 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vllckvcgdvasgfhygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrFgRip/vllckvcgdvasgfhygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrFg >1gat_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=SOLUTION STRUCTURE OF THE SPECIFIC DNA COMPLEX OF THE ZINC CONTAINING DNA BINDING DOMAIN OF THE ERYTHROID TRANSCRIPTION FACTOR GATA-1 BY MULTIDIMENSIONAL NMR organism=GALLUS GALLUS DNA sequence DG(C120):DC(B113) DT(C121):DA(B112) DT(C122):DA(B111) DT(C123):DA(B110) DA(C124):DT(B109) DT(C125):DA(B108) DC(C126):DG(B107) DT(C127):DA(B106) chainA ( 16) THR16 0 0 0 0 4 4 0 0 ( 17) LEU17 0 0 0 0 0 4 9 11 ( 29) ASN29 0 0 0 0 1 2 1 0 ( 33) LEU33 0 0 0 8 3 0 0 0 ( 37) LEU37 0 0 2 0 0 0 0 0 ( 57) LYS57 0 0 0 0 3 1 0 0 prot.sequence kragtvcsncqtsttTLwrrspmgdpvcNacgLyykLhqvnrpltmrkdgiqtrnrKvss >1gau_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=SOLUTION STRUCTURE OF THE SPECIFIC DNA COMPLEX OF THE ZINC CONTAINING DNA BINDING DOMAIN OF THE ERYTHROID TRANSCRIPTION FACTOR GATA-1 BY MULTIDIMENSIONAL NMR organism=? DNA sequence DG(C120):DC(B113) DT(C121):DA(B112) DT(C122):DA(B111) DT(C123):DA(B110) DA(C124):DT(B109) DT(C125):DA(B108) DC(C126):DG(B107) DT(C127):DA(B106) chainA ( 16) THR16 0 0 0 0 4 4 0 0 ( 17) LEU17 0 0 0 0 0 9 13 6 ( 29) ASN29 0 0 0 0 2 1 0 0 ( 33) LEU33 0 0 0 8 3 0 0 0 ( 37) LEU37 0 0 3 2 0 0 0 0 ( 57) LYS57 0 0 0 0 2 0 0 0 prot.sequence kragtvcsncqtsttTLwrrspmgdpvcNacgLyykLhqvnrpltmrkdgiqtrnrKvss >1gcc_A:DNA-binding_domain; title=SOLUTION NMR STRUCTURE OF THE COMPLEX OF GCC-BOX BINDING DOMAIN OF ATERF1 AND GCC-BOX DNA, MINIMIZED AVERAGE STRUCTURE organism=ARABIDOPSIS THALIANA DNA sequence DT(B3):DA(C24) DA(B4):DT(C23) DG(B5):DC(C22) DC(B6):DG(C21) DC(B7):DG(C20) DG(B8):DC(C19) DC(B9):DG(C18) DC(B10):DG(C17) DA(B11):DT(C16) DG(B12):DC(C15) DC(B13):DG(C14) chainA ( 7) ARG150 0 0 0 4 13 20 1 0 0 0 0 ( 9) ARG152 0 0 9 11 4 0 0 0 0 0 0 ( 11) TRP154 11 12 0 0 0 0 0 0 0 0 0 ( 17) GLU160 0 0 0 0 1 1 1 0 0 0 0 ( 19) ARG162 0 0 0 0 0 0 4 15 11 0 0 ( 27) ARG170 0 0 0 0 14 8 0 0 0 0 0 ( 29) TRP172 0 0 8 9 0 0 0 0 0 0 0 prot.sequence khyrgvRqRpWgkfaaEiRdpakngaRvWlgtfetaedaalaydraafrmrgsrallnfplrv >1gd2_G:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF BZIP TRANSCRIPTION FACTOR PAP1 BOUND TO DNA organism=Schizosaccharomyces pombe DNA sequence DG(C-6):DC(D6) DG(C-5):DC(D5) DT(C-4):DA(D4) DT(C-3):DA(D3) DA(C-2):DT(D2) DC(C-1):DG(D1) DG(C1):DC(D-1) DT(C2):DA(D-2) DA(C3):DT(D-3) DA(C4):DT(D-4) DC(C5):DG(D-5) DC(C6):DG(D-6) chainG ( 7) ARG82 0 0 0 0 0 0 0 0 0 1 4 12 ( 10) GLN85 0 0 0 0 0 0 0 0 0 0 0 4 ( 11) ASN86 0 0 0 0 0 0 0 1 11 4 1 0 ( 12) ARG87 0 0 0 0 0 0 0 1 0 0 0 0 ( 14) ALA89 0 0 0 0 0 0 0 0 0 1 2 0 ( 15) GLN90 0 0 0 0 0 0 4 12 8 4 0 0 ( 18) PHE93 0 0 0 0 0 0 0 0 6 5 0 0 ( 19) ARG94 0 0 0 0 0 18 7 0 0 0 0 0 prot.sequence qepsskRkaQNRaAQraFRkrkedhlkaletqvvtlkelhssttlendqlrqkvrqleeelril >1gdt_A:Resolvase-like;Homeodomain-like; title=CRYSTAL STRUCTURE OF A SITE-SPECIFIC RECOMBINASE, GAMMA-DELTA RESOLVASE COMPLEXED WITH A 34 BP CLEAVAGE SITE organism=Escherichia coli DNA sequence DC(E2):DG(D35) DA(E3):DT(D34) DG(E4):DC(D33) DT(E5):DA(D32) DG(E6):DC(D31) DT(E7):DA(D30) DC(E8):DG(D29) DC(E9):DG(D28) DG(E10):DC(D27) DA(E11):DT(D26) DT(E12):DA(D25) DA(E13):DT(D24) DA(E14):DT(D23) DT(E15):DA(C22) DT(E16):DA(C21) DT(E17):DA(C20) DA(E18):DT(C19) DT(E19):DA(C18) DA(E20):DT(C17) DA(E21):DT(C16) DA(E22):DT(C15) DT(F23):DA(C14) DT(F24):DA(C13) DA(F25):DT(C12) DT(F26):DA(C11) DC(F27):DG(C10) DG(F28):DC(C9) DG(F29):DC(C8) DA(F30):DT(C7) DC(F31):DG(C6) DA(F32):DT(C5) DC(F33):DG(C4) DT(F34):DA(C3) DG(F35):DC(C2) chainA (122) ILE122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ARG125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) THR126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 11 3 0 0 0 0 0 0 0 0 0 (171) ALA171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 (172) ARG172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 14 0 0 0 (173) SER173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 4 0 0 0 0 0 0 (174) THR174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (176) TYR176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 (177) LYS177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 prot.sequence mrlfgyarvstsqqsldiqvralkdagvkanriftdkasgsssdrkgldllrmkveegdvilvkkldrlgrdtadmiqlikefdaqgvsirfiddgistdgemgkmvvtilsavaqaerqrIleRTnegRqeamakgvvFgRkrkidrdavlnmwqqglgashisktmniARSTvYKvinesn >1gdt_AB:Resolvase-like;Homeodomain-like; title=CRYSTAL STRUCTURE OF A SITE-SPECIFIC RECOMBINASE, GAMMA-DELTA RESOLVASE COMPLEXED WITH A 34 BP CLEAVAGE SITE organism=Escherichia coli DNA sequence DC(C2):DG(F35) DA(C3):DT(F34) DG(C4):DC(F33) DT(C5):DA(F32) DG(C6):DC(F31) DT(C7):DA(F30) DC(C8):DG(F29) DC(C9):DG(F28) DG(C10):DC(F27) DA(C11):DT(F26) DT(C12):DA(F25) DA(C13):DT(F24) DA(C14):DT(F23) DT(C15):DA(E22) DT(C16):DA(E21) DT(C17):DA(E20) DA(C18):DT(E19) DT(C19):DA(E18) DA(C20):DT(E17) DA(C21):DT(E16) DA(C22):DT(E15) DT(D23):DA(E14) DT(D24):DA(E13) DA(D25):DT(E12) DT(D26):DA(E11) DC(D27):DG(E10) DG(D28):DC(E9) DG(D29):DC(E8) DA(D30):DT(E7) DC(D31):DG(E6) DA(D32):DT(E5) DC(D33):DG(E4) DT(D34):DA(E3) DG(D35):DC(E2) chainA (122) ILE122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ARG125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) THR126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 11 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) ARG142 0 0 0 0 0 0 0 0 0 3 11 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ALA171 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG172 0 0 0 14 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) SER173 0 0 0 0 0 0 4 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR174 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) TYR176 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) LYS177 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (126) THR126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 8 1 0 0 0 0 0 0 0 0 0 (171) ALA171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 (172) ARG172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 8 0 0 0 (173) SER173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 7 0 0 0 0 0 0 (174) THR174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 (176) TYR176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 1 0 0 0 (177) LYS177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence mrlfgyarvstsqqsldiqvralkdagvkanriftdkasgsssdrkgldllrmkveegdvilvkkldrlgrdtadmiqlikefdaqgvsirfiddgistdgemgkmvvtilsavaqaerqrIleRTnegRqeamakgvvFgRkrkidrdavlnmwqqglgashisktmniARSTvYKvinesn/mrlfgyarvstsqqsldiqvralkdagvkanriftdkasgsssdrkgldllrmkveegdvilvkkldrlgrdtadmiqlikefdaqgvsirfiddgistdgemgkmvvtilsavaqaerqrilerTnegrqeamakgvvFgRkrkidrdavlnmwqqglgashisktmniARSTvYKvinesn >1gji_A:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF C-REL BOUND TO DNA organism=Gallus gallus DNA sequence DG(C1):DC(D320) DG(C2):DC(D319) DG(C3):DC(D318) DT(C4):DA(D317) DT(C5):DA(D316) DT(C6):DA(D315) DA(C7):DT(D314) DA(C8):DT(D313) DA(C9):DT(D312) DG(C10):DC(D311) DA(C11):DT(D310) DA(C12):DT(D309) DA(C13):DT(D308) DT(C14):DA(D307) DT(C15):DA(D306) DC(C16):DG(D305) DC(C17):DG(D304) DA(C18):DT(D303) DG(C19):DC(D302) DA(C20):DT(D301) chainA ( 15) ARG21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 23 0 0 0 ( 17) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 ( 18) TYR24 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 ( 20) CYS26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 21) GLU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 2 0 0 0 (172) ARG178 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 prot.sequence pyieifeqprqrgmRfRYkCEgrsagsipgehstdnnktfpsiqilnyfgkvkirttlvtknepykphphdlvgkdcrdgyyeaefgperrvlsfqnlgiqcvkkkdlkesislriskkinpfnvpeeqlhnideydlnvvrlcfqaflpdehgnytlalpplisnpiydnRapntaelricrvnkncgsvkggdeifilcdkvqkddievrfvldnweakgsfsqadvhrqvaivfrtppflrditepitvkmqlrrpsdqevsepmdfrylpd >1gji_AB:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF C-REL BOUND TO DNA organism=Gallus gallus DNA sequence DT(D301):DA(C20) DC(D302):DG(C19) DT(D303):DA(C18) DG(D304):DC(C17) DG(D305):DC(C16) DA(D306):DT(C15) DA(D307):DT(C14) DT(D308):DA(C13) DT(D309):DA(C12) DT(D310):DA(C11) DC(D311):DG(C10) DT(D312):DA(C9) DT(D313):DA(C8) DT(D314):DA(C7) DA(D315):DT(C6) DA(D316):DT(C5) DA(D317):DT(C4) DC(D318):DG(C3) DC(D319):DG(C2) DC(D320):DG(C1) chainA ( 15) ARG21 0 0 0 23 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG23 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) TYR24 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) CYS26 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU27 0 0 0 2 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG178 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 15) ARG21 0 0 0 0 0 0 0 0 0 1 12 5 0 0 0 0 0 0 0 0 ( 17) ARG23 0 0 0 0 0 0 0 0 0 0 2 3 2 0 0 0 0 0 0 0 ( 18) TYR24 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 ( 20) CYS26 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 21) GLU27 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 (172) ARG178 0 0 0 0 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 0 (203) LYS209 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pyieifeqprqrgmRfRYkCEgrsagsipgehstdnnktfpsiqilnyfgkvkirttlvtknepykphphdlvgkdcrdgyyeaefgperrvlsfqnlgiqcvkkkdlkesislriskkinpfnvpeeqlhnideydlnvvrlcfqaflpdehgnytlalpplisnpiydnRapntaelricrvnkncgsvkggdeifilcdkvqkddievrfvldnweakgsfsqadvhrqvaivfrtppflrditepitvkmqlrrpsdqevsepmdfrylpd/pyieifeqprqrgmRfRYkCEgrsagsipgehstdnnktfpsiqilnyfgkvkirttlvtknepykphphdlvgkdcrdgyyeaefgperrvlsfqnlgiqcvkkkdlkesislriskkinpfnvpeeqlhnideydlnvvrlcfqaflpdehgnytlalpplisnpiydnRapntaelricrvnkncgsvkggdeifilcdKvqkddievrfvldnweakgsfsqadvhrqvaivfrtppflrditepitvkmqlrrpsdqevsepmdfrylpd >1glu_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNA organism=Rattus norvegicus DNA sequence DC(C-9):DG(D9) DA(C-8):DT(D8) DG(C-7):DC(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DC(C-4):DG(D4) DA(C-3):DT(D3) DT(C-2):DA(D2) DC(C-1):DG(D1) DG(C1):DC(D-1) DA(C2):DT(D-2) DT(C3):DA(D-3) DG(C4):DC(D-4) DT(C5):DA(D-5) DT(C6):DA(D-6) DC(C7):DG(D-7) DT(C8):DA(D-8) DG(C9):DC(D-9) chainA ( 28) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 ( 29) VAL462 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 33) ARG466 0 0 0 0 0 0 0 0 0 0 0 15 11 0 0 0 0 0 ( 78) LYS511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence mkparpclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearKtkk >1glu_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNA organism=Rattus norvegicus DNA sequence DC(D-9):DG(C9) DA(D-8):DT(C8) DG(D-7):DC(C7) DA(D-6):DT(C6) DA(D-5):DT(C5) DC(D-4):DG(C4) DA(D-3):DT(C3) DT(D-2):DA(C2) DC(D-1):DG(C1) DG(D1):DC(C-1) DA(D2):DT(C-2) DT(D3):DA(C-3) DG(D4):DC(C-4) DT(D5):DA(C-5) DT(D6):DA(C-6) DC(D7):DG(C-7) DT(D8):DA(C-8) DG(D9):DC(C-9) chainA ( 28) LYS461 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) VAL462 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG466 0 0 0 0 0 11 15 0 0 0 0 0 0 0 0 0 0 0 ( 78) LYS511 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 28) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 ( 33) ARG466 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence mkparpclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearKtkk/mkparpclvcsdeasgchygvltcgscKvffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkk >1gm5_A:P-loop_containing_nucleoside_triphosphate_hydrolases;Nucleic_acid-binding_proteins;RecG,_N-terminal_domain; title=STRUCTURE OF RECG BOUND TO THREE-WAY DNA JUNCTION organism=THERMOTOGA MARITIMA DNA sequence DC(X1):DG(Y20) DA(X2):DT(Y19) DG(X3):DC(Y18) DC(X4):DG(Y17) DT(X5):DA(Y16) DC(X6):DG(Y15) DC(X7):DG(Y14) DA(X8):DT(Y13) DT(X9):DA(Y12) DG(X10):DC(Y11) chainA (179) MET185 0 0 0 0 0 0 0 0 0 3 (198) PHE204 0 0 0 0 0 0 0 0 0 59 (199) ASN205 0 0 0 0 0 0 0 0 0 7 (200) GLN206 0 0 0 0 0 0 0 0 0 18 (234) ASN240 0 0 0 0 0 0 0 0 0 2 prot.sequence ftsslflwgealptlleeflnevekmlknqvntrrihqllkelddpllenkdleeklqafldyvkeipnlpearkryriqkslemieklrswflidylecsgeevdlstdiqyakgvgpnrkkklkklgietlrdlleffprdyedrrkifklndllpgekvttqgkivsvetkkfqnMniltavlsdglvhvplkwFNQdylqtylkqltgkevfvtgtvksnaytgqyeihNaevtpkegeyvrrilpiyrltsgisqkqmrkifeenipslccslketlperilekrkllgvkdayygmhfpktfyhlekarerlayeelfvlqlafqkirkerekhggipkkiegklaeefikslpfkltnaqkrahqeirndmisekpmnrllqgdvgsgktvvaqlaildnyeagfqtafmvptsilaiqhyrrtvesfskfnihvalligattpsekekiksglrngqidvvigthaliqedvhfknlglviideqhrfealmnkgkmvdtlvmsatpiprsmalafygdldvtvidemppgrkevqtmlvpmdrvnevyefvrqevmrggqafivypliksavemyeylskevfklglmhgrlsqeekdrvmlefaegrydilvsttvievgidvpranvmvienperfglaqlhqlrgrvgrggqeaycflvvgdvgeeamerlrfftlntdgfkiaeydlktrgpgekqhglsgfkvadlyrdlkllew >1gt0_C:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=CRYSTAL STRUCTURE OF A POU/HMG/DNA TERNARY COMPLEX organism=HOMO SAPIENS DNA sequence DT(B26):DA(A24) DC(B27):DG(A23) DC(B28):DG(A22) DC(B29):DG(A21) DA(B30):DT(A20) DT(B31):DA(A19) DT(B32):DA(A18) DA(B33):DT(A17) DG(B34):DC(A16) DC(B35):DG(A15) DA(B36):DT(A14) DT(B37):DA(A13) DC(B38):DG(A12) DC(B39):DG(A11) DA(B40):DT(A10) DA(B41):DT(A9) DA(B42):DT(A8) DC(B43):DG(A7) DA(B44):DT(A6) DA(B45):DT(A5) DA(B46):DT(A4) DG(B47):DC(A3) DA(B48):DT(A2) chainC ( 41) SER43 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN44 0 0 0 0 0 0 0 0 0 0 1 10 9 0 0 0 0 0 0 0 0 0 0 ( 43) THR45 0 0 0 0 0 0 0 0 5 6 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) SER48 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG49 0 0 0 0 0 0 0 0 7 9 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG105 0 0 0 0 0 0 5 8 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) VAL147 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) SER150 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ASN151 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) GLN154 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence psdleeleqfaktfkqrriklgftqgdvglamgklygndfSQTtiSRfealnlsfknmsklkpllekwlndaenlglsrrrkkRtsietnirvaleksflenqkptseeitmiadqlnmekevirVwfSNrrQkekr >1gt0_CD:lambda_repressor-like_DNA-binding_domains;Homeodomain-like;HMG-box; title=CRYSTAL STRUCTURE OF A POU/HMG/DNA TERNARY COMPLEX organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DT(A2):DA(B48) DC(A3):DG(B47) DT(A4):DA(B46) DT(A5):DA(B45) DT(A6):DA(B44) DG(A7):DC(B43) DT(A8):DA(B42) DT(A9):DA(B41) DT(A10):DA(B40) DG(A11):DC(B39) DG(A12):DC(B38) DA(A13):DT(B37) DT(A14):DA(B36) DG(A15):DC(B35) DC(A16):DG(B34) DT(A17):DA(B33) DA(A18):DT(B32) DA(A19):DT(B31) DT(A20):DA(B30) DG(A21):DC(B29) DG(A22):DC(B28) DG(A23):DC(B27) DA(A24):DT(B26) chainC ( 41) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 42) GLN44 0 0 0 0 0 0 0 0 0 0 9 10 1 0 0 0 0 0 0 0 0 0 0 ( 43) THR45 0 0 0 0 0 0 0 0 0 0 0 0 10 6 5 0 0 0 0 0 0 0 0 ( 46) SER48 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 47) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 7 9 7 0 0 0 0 0 0 0 0 ( 84) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 8 5 0 0 0 0 0 0 (126) VAL147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 (129) SER150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (130) ASN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 (133) GLN154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 chainD ( 5) ARG5 0 0 0 0 0 8 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ASN8 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) PHE10 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) MET11 0 0 0 13 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN30 0 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER31 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER34 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) TYR72 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG76 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence psdleeleqfaktfkqrriklgftqgdvglamgklygndfSQTtiSRfealnlsfknmsklkpllekwlndaenlglsrrrkkRtsietnirvaleksflenqkptseeitmiadqlnmekevirVwfSNrrQkekr/drvkRpmNaFMvwsrgqRrkmaqenpkmhNSeiSkrlgaewkllsetekrpfideakrlralhmkehpdykYrprRktk >1gtw_A:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE TOM-1A PROMOTER organism=HOMO SAPIENS DNA sequence DA(C2):DT(D116) DT(C3):DA(D115) DG(C4):DC(D114) DT(C5):DA(D113) DG(C6):DC(D112) DG(C7):DC(D111) DC(C8):DG(D110) DG(C9):DC(D109) DC(C10):DG(D108) DA(C11):DT(D107) DA(C12):DT(D106) DT(C13):DA(D105) DC(C14):DG(D104) DC(C15):DG(D103) DT(C16):DA(D102) chainA ( 11) ARG278 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 1 7 6 3 0 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 2 6 2 0 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 22) ARG289 0 0 0 0 0 0 16 14 6 2 0 0 0 0 0 prot.sequence dkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk >1gtw_AB:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE TOM-1A PROMOTER organism=HOMO SAPIENS DNA sequence DA(D102):DT(C16) DG(D103):DC(C15) DG(D104):DC(C14) DA(D105):DT(C13) DT(D106):DA(C12) DT(D107):DA(C11) DG(D108):DC(C10) DC(D109):DG(C9) DG(D110):DC(C8) DC(D111):DG(C7) DC(D112):DG(C6) DA(D113):DT(C5) DC(D114):DG(C4) DA(D115):DT(C3) DT(D116):DA(C2) chainA ( 11) ARG278 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 ( 14) ASN281 0 0 0 3 6 7 1 0 0 0 0 0 0 0 0 ( 17) ALA284 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 18) VAL285 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 ( 21) SER288 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 22) ARG289 0 0 0 0 0 2 6 14 16 0 0 0 0 0 0 chainB ( 11) ARG278 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 0 0 7 8 3 0 0 ( 15) ASN282 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 0 1 2 3 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 22) ARG289 0 0 0 0 0 0 0 1 12 7 2 0 0 0 0 prot.sequence dkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk/dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql >1gu4_A:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A HIGH AFFINITY DNA FRAGMENT organism=HOMO SAPIENS DNA sequence DA(C2):DT(D116) DG(C3):DC(D115) DG(C4):DC(D114) DA(C5):DT(D113) DT(C6):DA(D112) DT(C7):DA(D111) DG(C8):DC(D110) DC(C9):DG(D109) DG(C10):DC(D108) DC(C11):DG(D107) DA(C12):DT(D106) DA(C13):DT(D105) DT(C14):DA(D104) DA(C15):DT(D103) DT(C16):DA(D102) chainA ( 11) ARG278 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 0 1 7 5 1 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 0 2 6 2 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 22) ARG289 0 0 0 0 0 0 0 15 13 6 2 0 0 0 0 prot.sequence dkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk >1gu4_AB:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A HIGH AFFINITY DNA FRAGMENT organism=HOMO SAPIENS DNA sequence DA(D102):DT(C16) DT(D103):DA(C15) DA(D104):DT(C14) DT(D105):DA(C13) DT(D106):DA(C12) DG(D107):DC(C11) DC(D108):DG(C10) DG(D109):DC(C9) DC(D110):DG(C8) DA(D111):DT(C7) DA(D112):DT(C6) DT(D113):DA(C5) DC(D114):DG(C4) DC(D115):DG(C3) DT(D116):DA(C2) chainA ( 11) ARG278 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 ( 14) ASN281 0 0 1 5 7 1 0 0 0 0 0 0 0 0 0 ( 17) ALA284 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL285 0 0 0 2 6 2 0 0 0 0 0 0 0 0 0 ( 21) SER288 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 22) ARG289 0 0 0 0 2 6 13 15 0 0 0 0 0 0 0 chainB ( 11) ARG278 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 0 7 7 3 0 0 0 ( 15) ASN282 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 2 4 2 0 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 22) ARG289 0 0 0 0 0 0 0 4 9 15 0 0 0 0 0 prot.sequence dkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk/dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql >1gu5_A:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE MIM-1 PROMOTER organism=HOMO SAPIENS DNA sequence DT(C2):DA(D116) DG(C3):DC(D115) DT(C4):DA(D114) DG(C5):DC(D113) DT(C6):DA(D112) DT(C7):DA(D111) DG(C8):DC(D110) DG(C9):DC(D109) DC(C10):DG(D108) DC(C11):DG(D107) DA(C12):DT(D106) DA(C13):DT(D105) DT(C14):DA(D104) DC(C15):DG(D103) DA(C16):DT(D102) chainA ( 11) ARG278 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 0 1 7 7 1 0 0 ( 15) ASN282 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 0 3 5 3 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 22) ARG289 0 0 0 0 0 0 0 0 2 12 14 0 0 0 0 prot.sequence dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk >1gu5_AB:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE MIM-1 PROMOTER organism=HOMO SAPIENS DNA sequence DT(D102):DA(C16) DG(D103):DC(C15) DA(D104):DT(C14) DT(D105):DA(C13) DT(D106):DA(C12) DG(D107):DC(C11) DG(D108):DC(C10) DC(D109):DG(C9) DC(D110):DG(C8) DA(D111):DT(C7) DA(D112):DT(C6) DC(D113):DG(C5) DA(D114):DT(C4) DC(D115):DG(C3) DA(D116):DT(C2) chainA ( 11) ARG278 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 ( 14) ASN281 0 0 1 7 7 1 0 0 0 0 0 0 0 0 0 ( 15) ASN282 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 17) ALA284 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL285 0 0 0 3 5 3 0 0 0 0 0 0 0 0 0 ( 21) SER288 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 22) ARG289 0 0 0 0 14 12 2 0 0 0 0 0 0 0 0 chainB ( 11) ARG278 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 0 7 8 3 0 0 0 ( 15) ASN282 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 3 5 3 0 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 ( 22) ARG289 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk/dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql >1gxp_A:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=PHOB EFFECTOR DOMAIN IN COMPLEX WITH PHO BOX DNA. organism=ESCHERICHIA COLI DNA sequence DC(D2):DG(C23) DC(D3):DG(C22) DG(D4):DC(C21) DT(D5):DA(C20) DG(D6):DC(C19) DA(D7):DT(C18) DC(D8):DG(C17) DA(D9):DT(C16) DA(D10):DT(C15) DC(D11):DG(C14) DT(D12):DA(C13) DT(D13):DA(C12) DT(D14):DA(C11) DA(D15):DT(C10) DT(D16):DA(C9) DG(D17):DC(C8) DA(D18):DT(C7) DC(D19):DG(C6) DA(D20):DT(C5) DG(D21):DC(C4) DC(D22):DG(C3) DT(D23):DA(C2) chainA ( 67) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 ( 68) THR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 70) ASP196 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 71) VAL197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 8 0 0 0 0 0 ( 74) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 75) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 8 0 0 0 ( 93) ARG219 0 0 0 0 0 0 0 0 0 8 8 4 0 0 0 0 0 0 0 0 0 0 prot.sequence aveeviemqglsldptshrvmageeplemgptefkllhffmthpervysreqllnhvwgtnvyvedRTvDVhiRRlrkalepgghdrmvqtvRgtgyrfstrf >1gxp_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=PHOB EFFECTOR DOMAIN IN COMPLEX WITH PHO BOX DNA. organism=ESCHERICHIA COLI DNA sequence DA(C2):DT(D23) DG(C3):DC(D22) DC(C4):DG(D21) DT(C5):DA(D20) DG(C6):DC(D19) DT(C7):DA(D18) DC(C8):DG(D17) DA(C9):DT(D16) DT(C10):DA(D15) DA(C11):DT(D14) DA(C12):DT(D13) DA(C13):DT(D12) DG(C14):DC(D11) DT(C15):DA(D10) DT(C16):DA(D9) DG(C17):DC(D8) DT(C18):DA(D7) DC(C19):DG(D6) DA(C20):DT(D5) DC(C21):DG(D4) DG(C22):DC(D3) DG(C23):DC(D2) chainA ( 67) ARG193 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR194 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASP196 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL197 0 0 0 0 0 8 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG200 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG201 0 0 0 8 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG219 0 0 0 0 0 0 0 0 0 0 4 8 8 0 0 0 0 0 0 0 0 0 chainB ( 65) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 66) THR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 69) VAL197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 1 0 0 0 ( 72) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 ( 73) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 2 0 0 0 0 0 ( 91) ARG219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence aveeviemqglsldptshrvmageeplemgptefkllhffmthpervysreqllnhvwgtnvyvedRTvDVhiRRlrkalepgghdrmvqtvRgtgyrfstrf/eeviemqglsldptshrvmageeplemgptefkllhffmthpervysreqllnhvwgtnvyvedRTvdVhiRRlrkalepgghdrmvqtvRgtgyrfstrf >1gxp_EF:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=PHOB EFFECTOR DOMAIN IN COMPLEX WITH PHO BOX DNA. organism=ESCHERICHIA COLI DNA sequence DA(G2):DT(H23) DG(G3):DC(H22) DC(G4):DG(H21) DT(G5):DA(H20) DG(G6):DC(H19) DT(G7):DA(H18) DC(G8):DG(H17) DA(G9):DT(H16) DT(G10):DA(H15) DA(G11):DT(H14) DA(G12):DT(H13) DA(G13):DT(H12) DG(G14):DC(H11) DT(G15):DA(H10) DT(G16):DA(H9) DG(G17):DC(H8) DT(G18):DA(H7) DC(G19):DG(H6) DA(G20):DT(H5) DC(G21):DG(H4) DG(G22):DC(H3) DG(G23):DC(H2) chainE ( 66) ARG193 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR194 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) VAL197 0 0 0 0 0 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG200 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG201 0 0 0 5 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG219 0 0 0 0 0 0 0 0 0 0 5 5 3 0 0 0 0 0 0 0 0 0 chainF ( 66) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 67) THR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 70) VAL197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 ( 73) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 ( 74) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 1 0 0 0 0 0 ( 92) ARG219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence veeviemqglsldptshrvmageeplemgptefkllhffmthpervysreqllnhvwgtnvyvedRTvdVhiRRlrkalepgghdrmvqtvRgtgyrfstrf/veeviemqglsldptshrvmageeplemgptefkllhffmthpervysreqllnhvwgtnvyvedRTvdVhiRRlrkalepgghdrmvqtvRgtgyrfstrf >1h0m_AB:Pheromone-binding_domain_of_LuxR-like_quorum-sensing_transcription_factors;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=THREE-DIMENSIONAL STRUCTURE OF THE QUORUM SENSING PROTEIN TRAR BOUND TO ITS AUTOINDUCER AND TO ITS TARGET DNA organism=Rhizobium radiobacter DNA sequence DA(E1):DT(F18) DT(E2):DA(F17) DG(E3):DC(F16) DT(E4):DA(F15) DG(E5):DC(F14) DC(E6):DG(F13) DA(E7):DT(F12) DG(E8):DC(F11) DA(E9):DT(F10) DT(E10):DA(F9) DC(E11):DG(F8) DT(E12):DA(F7) DG(E13):DC(F6) DC(E14):DG(F5) DA(E15):DT(F4) DC(E16):DG(F3) DA(E17):DT(F2) DT(E18):DA(F1) chainA (198) TYR202 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (199) ASN203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (202) ARG206 0 0 0 0 0 0 0 0 0 0 0 2 5 12 12 0 0 0 (203) VAL207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 (206) ARG210 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 2 0 0 chainB (198) TYR202 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (199) ASN203 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ARG206 0 0 0 3 11 6 1 0 0 0 0 0 0 0 0 0 0 0 (203) VAL207 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ARG210 0 0 4 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) GLU211 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mqhwldkltdlaaiegdecilktgladiadhfgftgyaylhiqhrhitavtnyhrqwqstyfdkkfealdpvvkrarsrkhiftwsgeherptlskderafydhasdfgirsgitipiktangfmsmftmasdkpvidldreidavaaaatigqiharisflrttdaawldpkeatylrwiavgktmeeiadvegvkYNsvRVklReamkrfdvrskahltalairrkli/mqhwldkltdlaaiegdecilktgladiadhfgftgyaylhiqhrhitavtnyhrqwqstyfdkkfealdpvvkrarsrkhiftwsgeherptlskderafydhasdfgirsgitipiktangfmsmftmasdkpvididavaaaatigqiharisflrttptaedaawldpkeatylrwiavgktmeeiadvegvkYNsvRVklREamkrfdvrskahltalairrkli >1h0m_C:Pheromone-binding_domain_of_LuxR-like_quorum-sensing_transcription_factors;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=THREE-DIMENSIONAL STRUCTURE OF THE QUORUM SENSING PROTEIN TRAR BOUND TO ITS AUTOINDUCER AND TO ITS TARGET DNA organism=Rhizobium radiobacter DNA sequence DA(G1):DT(H18) DT(G2):DA(H17) DG(G3):DC(H16) DT(G4):DA(H15) DG(G5):DC(H14) DC(G6):DG(H13) DA(G7):DT(H12) DG(G8):DC(H11) DA(G9):DT(H10) DT(G10):DA(H9) DC(G11):DG(H8) DT(G12):DA(H7) DG(G13):DC(H6) DC(G14):DG(H5) DA(G15):DT(H4) DC(G16):DG(H3) DA(G17):DT(H2) DT(G18):DA(H1) chainC (196) TYR202 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (197) ASN203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (200) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 6 14 9 0 0 0 (201) VAL207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 (204) ARG210 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 2 0 0 prot.sequence mqhwldkltdlaaiegdecilktgladiadhfgftgyaylhiqhrhitavtnyhrqwqstyfdkkfealdpvvkrarsrkhiftwsgeherptlskderafydhasdfgirsgitipiktangfmsmftmasdkpvidldreidavaaaatigqiharisflrtaawldpkeatylrwiavgktmeeiadvegvkYNsvRVklReamkrfdvrskahltalairrkli >1h0m_CD:Pheromone-binding_domain_of_LuxR-like_quorum-sensing_transcription_factors;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=THREE-DIMENSIONAL STRUCTURE OF THE QUORUM SENSING PROTEIN TRAR BOUND TO ITS AUTOINDUCER AND TO ITS TARGET DNA organism=Rhizobium radiobacter DNA sequence DA(G1):DT(H18) DT(G2):DA(H17) DG(G3):DC(H16) DT(G4):DA(H15) DG(G5):DC(H14) DC(G6):DG(H13) DA(G7):DT(H12) DG(G8):DC(H11) DA(G9):DT(H10) DT(G10):DA(H9) DC(G11):DG(H8) DT(G12):DA(H7) DG(G13):DC(H6) DC(G14):DG(H5) DA(G15):DT(H4) DC(G16):DG(H3) DA(G17):DT(H2) DT(G18):DA(H1) chainC (196) TYR202 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (197) ASN203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (200) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 6 14 9 0 0 0 (201) VAL207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 (204) ARG210 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 2 0 0 chainD (197) TYR202 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (198) ASN203 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) ARG206 0 0 0 3 11 8 2 0 0 0 0 0 0 0 0 0 0 0 (202) VAL207 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) ARG210 0 0 2 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) GLU211 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mqhwldkltdlaaiegdecilktgladiadhfgftgyaylhiqhrhitavtnyhrqwqstyfdkkfealdpvvkrarsrkhiftwsgeherptlskderafydhasdfgirsgitipiktangfmsmftmasdkpvidldreidavaaaatigqiharisflrtaawldpkeatylrwiavgktmeeiadvegvkYNsvRVklReamkrfdvrskahltalairrkli/qhwldkltdlaaiegdecilktgladiadhfgftgyaylhiqhrhitavtnyhrqwqstyfdkkfealdpvvkrarsrkhiftwsgeherptlskderafydhasdfgirsgitipiktangfmsmftmasdkpvididavaaaatigqiharisflrttptaedaawldpkeatylrwiavgktmeeiadvegvkYNsvRVklREamkrfdvrskahltalairrkli >1h38_C:DNA/RNA_polymerases; title=STRUCTURE OF A T7 RNA POLYMERASE ELONGATION COMPLEX AT 2.9A RESOLUTION organism=BACTERIOPHAGE T7 DNA sequence DG(K2):DC(M9) DG(K3):DC(M8) DA(K4):DT(M7) DA(K5):DT(M6) DT(K6):DA(M5) DC(K7):DG(M4) DG(K8):DC(M3) DA(K9):DT(M2) chainC (627) PHE644 0 0 0 0 0 0 0 45 prot.sequence ntiniakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmferqlkagevadnaaakplittllpkmiarindwfeevkakrgkrptafqflqeikpeavayitikttlacltsadnttvqavasaigraiedearfgrirdleakhfkknveeqlnkrvghvykkafmqvveadmlskgllggeawsswhkedsihvgvrciemliestgmvslhrqnagvvgqdsetielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiealtawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvtvtdentgeisekvklgtkalagqwlaygvtrsvtkrsvmtlaygskeFgfrqqvledtiqpaidsgkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtrlnlmflgqfrdseidahkqesgiapnfvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa >1h6f_AB:p53-like_transcription_factors; title=HUMAN TBX3, A TRANSCRIPTION FACTOR RESPONSIBLE FOR ULNAR-MAMMARY SYNDROME, BOUND TO A PALINDROMIC DNA SITE organism=HOMO SAPIENS DNA sequence DA(C3):DT(D24) DT(C4):DA(D23) DT(C5):DA(D22) DT(C6):DA(D21) DC(C7):DG(D20) DA(C8):DT(D19) DC(C9):DG(D18) DA(C10):DT(D17) DC(C11):DG(D16) DC(C12):DG(D15) DT(C13):DA(D14) DA(C14):DT(D13) DG(C15):DC(D12) DG(C16):DC(D11) DT(C17):DA(D10) DG(C18):DC(D9) DT(C19):DA(D8) DG(C20):DC(D7) DA(C21):DT(D6) DA(C22):DT(D5) DA(C23):DT(D4) DT(C24):DA(D3) chainA ( 29) ARG130 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR262 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) ALA263 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) PHE279 0 0 0 0 0 0 0 0 3 4 3 0 0 0 0 0 0 0 0 0 0 0 (182) PHE283 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 31) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 (163) THR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 (164) ALA263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (180) PHE279 0 0 0 0 0 0 0 0 0 0 0 3 3 4 0 0 0 0 0 0 0 0 (184) PHE283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 prot.sequence dpkvhleakelwdqfhkrgtemvitksgRrmfppfkvrcsgldkkakyillmdiiaaddcrykfhnsrwmvagkadpempkrmyihpdspatgeqwmskvvtfhklkltnnisdkhgftilnsmhkyqprfhivrandilklpystfrtylfpetefiavTAyqndkitqlkidnnpFakgFrd/kddpkvhleakelwdqfhkrgtemvitksgRrmfppfkvrcsgldkkakyillmdiiaaddcrykfhnsrwmvagkadpempkrmyihpdspatgeqwmskvvtfhklkltnnisdkhgftilnsmhkyqprfhivrandilklpystfrtylfpetefiavTAyqndkitqlkidnnpFakgFrd >1h6f_B:p53-like_transcription_factors; title=HUMAN TBX3, A TRANSCRIPTION FACTOR RESPONSIBLE FOR ULNAR-MAMMARY SYNDROME, BOUND TO A PALINDROMIC DNA SITE organism=HOMO SAPIENS DNA sequence DA(C3):DT(D24) DT(C4):DA(D23) DT(C5):DA(D22) DT(C6):DA(D21) DC(C7):DG(D20) DA(C8):DT(D19) DC(C9):DG(D18) DA(C10):DT(D17) DC(C11):DG(D16) DC(C12):DG(D15) DT(C13):DA(D14) DA(C14):DT(D13) DG(C15):DC(D12) DG(C16):DC(D11) DT(C17):DA(D10) DG(C18):DC(D9) DT(C19):DA(D8) DG(C20):DC(D7) DA(C21):DT(D6) DA(C22):DT(D5) DA(C23):DT(D4) DT(C24):DA(D3) chainB ( 31) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 (163) THR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 (164) ALA263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (180) PHE279 0 0 0 0 0 0 0 0 0 0 0 3 3 4 0 0 0 0 0 0 0 0 (184) PHE283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 prot.sequence kddpkvhleakelwdqfhkrgtemvitksgRrmfppfkvrcsgldkkakyillmdiiaaddcrykfhnsrwmvagkadpempkrmyihpdspatgeqwmskvvtfhklkltnnisdkhgftilnsmhkyqprfhivrandilklpystfrtylfpetefiavTAyqndkitqlkidnnpFakgFrd >1h88_ABC:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX1 organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DA(D2):DT(E26) DT(D3):DA(E25) DG(D4):DC(E24) DT(D5):DA(E23) DG(D6):DC(E22) DG(D7):DC(E21) DC(D8):DG(E20) DG(D9):DC(E19) DC(D10):DG(E18) DA(D11):DT(E17) DA(D12):DT(E16) DT(D13):DA(E15) DC(D14):DG(E14) DC(D15):DG(E13) DT(D16):DA(E12) DT(D17):DA(E11) DA(D18):DT(E10) DA(D19):DT(E9) DC(D20):DG(E8) DG(D21):DC(E7) DG(D22):DC(E6) DA(D23):DT(E5) DC(D24):DG(E4) DT(D25):DA(E3) DG(D26):DC(E2) chainA ( 12) ARG278 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ASN281 0 0 0 0 0 0 0 0 0 9 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ALA284 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) VAL285 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) SER288 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG289 0 0 0 0 0 0 9 13 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 13) ARG278 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ASN281 0 0 3 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ASN282 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ALA284 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL285 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) SER288 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG289 0 0 0 0 4 6 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 90) LYS128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 8 0 0 0 ( 93) ARG131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 94) GLU132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 1 0 0 0 0 0 (140) ASP178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (141) ASN179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 (144) LYS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 0 (145) ASN183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 2 0 0 0 0 0 0 0 (148) ASN186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (149) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 prot.sequence vdkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe/tvdkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe/gktrwtreedeklkklveqngtddwkvianylpnrtdvqcqhrwqkvlnpelikgpwtkeedqrviklvqkygpkrwsviakhlkgrigKqcRErwhnhlnpevkktswteeedriiyqahkrlgnrwaeiakllpgrtDNaiKNhwNStmr >1h88_C:Homeodomain-like; title=CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX1 organism=MUS MUSCULUS DNA sequence DC(E2):DG(D26) DA(E3):DT(D25) DG(E4):DC(D24) DT(E5):DA(D23) DC(E6):DG(D22) DC(E7):DG(D21) DG(E8):DC(D20) DT(E9):DA(D19) DT(E10):DA(D18) DA(E11):DT(D17) DA(E12):DT(D16) DG(E13):DC(D15) DG(E14):DC(D14) DA(E15):DT(D13) DT(E16):DA(D12) DT(E17):DA(D11) DG(E18):DC(D10) DC(E19):DG(D9) DG(E20):DC(D8) DC(E21):DG(D7) DC(E22):DG(D6) DA(E23):DT(D5) DC(E24):DG(D4) DA(E25):DT(D3) DT(E26):DA(D2) chainC ( 90) LYS128 0 0 0 8 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG131 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) GLU132 0 0 0 0 0 1 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) ASP178 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) ASN179 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) LYS182 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) ASN183 0 0 0 0 0 0 0 2 10 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ASN186 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) SER187 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gktrwtreedeklkklveqngtddwkvianylpnrtdvqcqhrwqkvlnpelikgpwtkeedqrviklvqkygpkrwsviakhlkgrigKqcRErwhnhlnpevkktswteeedriiyqahkrlgnrwaeiakllpgrtDNaiKNhwNStmr >1h89_A:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX2 organism=HOMO SAPIENS DNA sequence DA(D2):DT(E26) DT(D3):DA(E25) DG(D4):DC(E24) DT(D5):DA(E23) DG(D6):DC(E22) DG(D7):DC(E21) DC(D8):DG(E20) DG(D9):DC(E19) DC(D10):DG(E18) DA(D11):DT(E17) DA(D12):DT(E16) DT(D13):DA(E15) DC(D14):DG(E14) DC(D15):DG(E13) DT(D16):DA(E12) DT(D17):DA(E11) DA(D18):DT(E10) DA(D19):DT(E9) DC(D20):DG(E8) DG(D21):DC(E7) DG(D22):DC(E6) DA(D23):DT(E5) DC(D24):DG(E4) DT(D25):DA(E3) DG(D26):DC(E2) chainA ( 6) ARG278 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ASN281 0 0 0 0 0 0 0 0 0 8 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ALA284 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) VAL285 0 0 0 0 0 0 0 0 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER288 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG289 0 0 0 0 0 0 10 12 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe >1h89_ABC:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX2 organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DC(E2):DG(D26) DA(E3):DT(D25) DG(E4):DC(D24) DT(E5):DA(D23) DC(E6):DG(D22) DC(E7):DG(D21) DG(E8):DC(D20) DT(E9):DA(D19) DT(E10):DA(D18) DA(E11):DT(D17) DA(E12):DT(D16) DG(E13):DC(D15) DG(E14):DC(D14) DA(E15):DT(D13) DT(E16):DA(D12) DT(E17):DA(D11) DG(E18):DC(D10) DC(E19):DG(D9) DG(E20):DC(D8) DC(E21):DG(D7) DC(E22):DG(D6) DA(E23):DT(D5) DC(E24):DG(D4) DA(E25):DT(D3) DT(E26):DA(D2) chainA ( 6) ARG278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 ( 9) ASN281 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 0 0 0 0 0 0 0 ( 12) ALA284 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 13) VAL285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 2 0 0 0 0 0 0 0 0 ( 16) SER288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 17) ARG289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 12 10 0 0 0 0 0 0 chainB ( 6) ARG278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 ( 9) ASN281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 3 0 0 ( 10) ASN282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 12) ALA284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 13) VAL285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 5 0 0 0 ( 16) SER288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 17) ARG289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 7 4 0 0 0 0 chainC ( 52) LYS128 0 0 0 7 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ARG131 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLU132 0 0 0 0 0 1 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ASN179 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) LYS182 0 0 0 0 0 4 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ASN183 0 0 0 0 0 0 0 2 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ASN186 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) SER187 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe/eykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe/qcqhrwqkvlnpelikgpwtkeedqrviklvqkygpkrwsviakhlkgrigKqcRErwhnhlnpevkktswteeedriiyqahkrlgnrwaeiakllpgrtdNaiKNhwNStmrr >1h8a_ABC:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX3 organism=HOMO SAPIENS / AVIAN MYELOBLASTOSIS VIRUS DNA sequence DC(E2):DG(D26) DA(E3):DT(D25) DG(E4):DC(D24) DT(E5):DA(D23) DC(E6):DG(D22) DC(E7):DG(D21) DG(E8):DC(D20) DT(E9):DA(D19) DT(E10):DA(D18) DA(E11):DT(D17) DA(E12):DT(D16) DG(E13):DC(D15) DG(E14):DC(D14) DA(E15):DT(D13) DT(E16):DA(D12) DT(E17):DA(D11) DG(E18):DC(D10) DC(E19):DG(D9) DG(E20):DC(D8) DC(E21):DG(D7) DC(E22):DG(D6) DA(E23):DT(D5) DC(E24):DG(D4) DA(E25):DT(D3) DT(E26):DA(D2) chainA ( 12) ARG278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 ( 15) ASN281 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 7 1 0 0 0 0 0 0 0 0 ( 18) ALA284 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 19) VAL285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 0 0 ( 22) SER288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 23) ARG289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 13 11 0 0 0 0 0 0 chainB ( 11) ARG278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 8 3 0 0 ( 15) ASN282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 5 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 22) ARG289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 7 2 0 0 0 0 chainC ( 42) LYS128 0 0 0 7 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG131 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) GLU132 0 0 0 0 0 2 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ASN179 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) LYS182 0 0 0 0 0 4 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN183 0 0 0 0 0 0 0 2 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASN186 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) SER187 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vdkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql/dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql/npelnkgpwtkeedqrviehvqkygpkrwsdiakhlkgrigKqcRErwhnhlnpevkktswteeedriiyqahkrlgnrwaeiakllpgrtdNavKNhwNStmrr >1h8a_B:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX3 organism=? DNA sequence DA(D2):DT(E26) DT(D3):DA(E25) DG(D4):DC(E24) DT(D5):DA(E23) DG(D6):DC(E22) DG(D7):DC(E21) DC(D8):DG(E20) DG(D9):DC(E19) DC(D10):DG(E18) DA(D11):DT(E17) DA(D12):DT(E16) DT(D13):DA(E15) DC(D14):DG(E14) DC(D15):DG(E13) DT(D16):DA(E12) DT(D17):DA(E11) DA(D18):DT(E10) DA(D19):DT(E9) DC(D20):DG(E8) DG(D21):DC(E7) DG(D22):DC(E6) DA(D23):DT(E5) DC(D24):DG(E4) DT(D25):DA(E3) DG(D26):DC(E2) chainB ( 11) ARG278 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ASN281 0 0 3 8 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ASN282 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ALA284 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL285 0 0 0 5 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) SER288 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG289 0 0 0 0 2 7 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql >1h9d_C:p53-like_transcription_factors; title=AML1/CBF-BETA/DNA COMPLEX organism=HOMO SAPIENS DNA sequence DC(H1):DG(G10) DA(H2):DT(G9) DA(H3):DT(G8) DC(H4):DG(G7) DC(H5):DG(G6) DG(H6):DC(G5) DC(H7):DG(G4) DA(H8):DT(G3) DA(H9):DT(G2) DC(H10):DG(G1) chainC ( 27) ARG80 0 0 0 0 0 4 14 3 0 0 ( 89) ARG142 7 6 0 0 0 0 0 0 0 0 (117) VAL170 0 0 0 2 4 0 0 0 0 0 (118) ASP171 0 0 0 9 6 4 0 0 0 0 (121) ARG174 0 0 0 2 9 17 0 0 0 0 (124) ARG177 0 0 4 8 8 0 0 0 0 0 prot.sequence vladhpgelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepRr >1h9t_AB:Fatty_acid_responsive_transcription_factor_FadR,_C-terminal_domain;"Winged_helix"_DNA-binding_domain;GntR_ligand-binding_domain-like; title=FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN COMPLEX WITH FADB OPERATOR organism=ESCHERICHIA COLI DNA sequence DG(Y1):DC(X19) DA(Y2):DT(X18) DT(Y3):DA(X17) DC(Y4):DG(X16) DT(Y5):DA(X15) DG(Y6):DC(X14) DG(Y7):DC(X13) DT(Y8):DA(X12) DC(Y9):DG(X11) DG(Y10):DC(X10) DT(Y11):DA(X9) DA(Y12):DT(X8) DC(Y13):DG(X7) DC(Y14):DG(X6) DA(Y15):DT(X5) DG(Y16):DC(X4) DA(Y17):DT(X3) DT(Y18):DA(X2) DG(Y19):DC(X1) chainA ( 31) ARG35 0 0 0 0 6 7 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR44 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 41) ARG45 0 0 0 0 0 7 14 4 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR46 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 45) ARG49 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 ( 46) GLU50 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 61) HIS65 0 0 0 2 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 31) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 3 14 4 0 0 0 0 ( 40) THR44 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 41) ARG45 0 0 0 0 0 0 0 0 0 0 0 2 15 8 0 0 0 0 0 ( 42) THR46 0 0 0 0 0 0 0 0 4 6 1 0 0 0 0 0 0 0 0 ( 45) ARG49 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 ( 46) GLU50 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 61) HIS65 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 prot.sequence aqspagfaeeyiiesiwnnrfppgtilpaeRelseligvTRTtlREvlqrlardgwltiqHgkptkvnnfwetsglniletlarldhesvpqlidnllsvrtnistifirtafrqhpdkaqevlatanevadhadafaeldynifrglafasgnpiyglilngmkglytrigrhyfanpearslalgfyhklsalcsegahdqvyetvrryghesgeiwhrmqknllaiqgr/aqspagfaeeyiiesiwnnrfppgtilpaeRelseligvTRTtlREvlqrlardgwltiqHgkptkvnnfwetsglniletlarldhesvpqlidnllsvrtnistifirtafrqhpdkaqevlatanevadhadafaeldynifrglafasgnpiyglilngmkglytrigrhyfanpearslalgfyhklsalcsegahdqvyetvrryghesgeiwhrmqknl >1h9t_B:Fatty_acid_responsive_transcription_factor_FadR,_C-terminal_domain;"Winged_helix"_DNA-binding_domain; title=FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN COMPLEX WITH FADB OPERATOR organism=ESCHERICHIA COLI DNA sequence DG(Y1):DC(X19) DA(Y2):DT(X18) DT(Y3):DA(X17) DC(Y4):DG(X16) DT(Y5):DA(X15) DG(Y6):DC(X14) DG(Y7):DC(X13) DT(Y8):DA(X12) DC(Y9):DG(X11) DG(Y10):DC(X10) DT(Y11):DA(X9) DA(Y12):DT(X8) DC(Y13):DG(X7) DC(Y14):DG(X6) DA(Y15):DT(X5) DG(Y16):DC(X4) DA(Y17):DT(X3) DT(Y18):DA(X2) DG(Y19):DC(X1) chainB ( 31) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 3 14 4 0 0 0 0 ( 40) THR44 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 41) ARG45 0 0 0 0 0 0 0 0 0 0 0 2 15 8 0 0 0 0 0 ( 42) THR46 0 0 0 0 0 0 0 0 4 6 1 0 0 0 0 0 0 0 0 ( 45) ARG49 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 ( 46) GLU50 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 61) HIS65 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 prot.sequence aqspagfaeeyiiesiwnnrfppgtilpaeRelseligvTRTtlREvlqrlardgwltiqHgkptkvnnfwetsglniletlarldhesvpqlidnllsvrtnistifirtafrqhpdkaqevlatanevadhadafaeldynifrglafasgnpiyglilngmkglytrigrhyfanpearslalgfyhklsalcsegahdqvyetvrryghesgeiwhrmqknl >1hao_H:?;Trypsin-like_serine_proteases;?;?; title=COMPLEX OF HUMAN ALPHA-THROMBIN WITH A 15MER OLIGONUCLEOTIDE GGTTGGTGTGGTTGG (BASED ON NMR MODEL OF DNA) organism=HOMO SAPIENS DNA sequence DG(D414) DT(D413) DT(D412) DG(D411) DG(D410) DT(D409) DG(D408) DT(D407) DG(D406) DG(D401):DG(D406) DG(D402):DG(D405) DT(D404) DT(D403) chainH ( 9) ILE24 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 66) HIS71 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 70) ARG75 0 5 3 10 0 0 0 0 0 0 12 4 0 ( 71) TYR76 0 0 0 0 0 0 0 0 0 0 0 4 18 ( 72) GLU77 0 0 10 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77A 24 12 0 0 0 0 0 0 0 0 1 7 0 ( 74) ASN78 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 75) ILE79 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 78) ILE82 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence ivegsdaeIgmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkHsrtRYeRNIekIsmlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketwgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfge >1hbx_A:SRF-like; title=TERNARY COMPLEX OF SAP-1 AND SRF WITH SPECIFIC SRE DNA organism=HOMO SAPIENS DNA sequence DA(W-16):DT(C-16) DC(W-15):DG(C-15) DA(W-14):DT(C-14) DC(W-13):DG(C-13) DC(W-12):DG(C-12) DG(W-11):DC(C-11) DG(W-10):DC(C-10) DA(W-9):DT(C-9) DA(W-8):DT(C-8) DG(W-7):DC(C-7) DT(W-6):DA(C-6) DC(W-5):DG(C-5) DC(W-4):DG(C-4) DT(W-3):DA(C-3) DA(W-2):DT(C-2) DA(W-1):DT(C-1) DT(W1):DA(C1) DT(W2):DA(C2) DA(W3):DT(C3) DG(W4):DC(C4) DG(W5):DC(C5) DC(W6):DG(C6) DC(W7):DG(C7) DA(W8):DT(C8) DT(W9):DA(C9) chainA ( 4) THR140 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG143 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 9 0 0 0 0 0 0 0 0 0 ( 22) TYR158 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS163 0 0 0 0 0 0 0 0 0 0 6 5 5 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gkkTrgRvkikmefidnklrrYttfsKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclnspd >1hbx_ABG:SRF-like; title=TERNARY COMPLEX OF SAP-1 AND SRF WITH SPECIFIC SRE DNA organism=HOMO SAPIENS DNA sequence DA(C9):DT(W9) DT(C8):DA(W8) DG(C7):DC(W7) DG(C6):DC(W6) DC(C5):DG(W5) DC(C4):DG(W4) DT(C3):DA(W3) DA(C2):DT(W2) DA(C1):DT(W1) DT(C-1):DA(W-1) DT(C-2):DA(W-2) DA(C-3):DT(W-3) DG(C-4):DC(W-4) DG(C-5):DC(W-5) DA(C-6):DT(W-6) DC(C-7):DG(W-7) DT(C-8):DA(W-8) DT(C-9):DA(W-9) DC(C-10):DG(W-10) DC(C-11):DG(W-11) DG(C-12):DC(W-12) DG(C-13):DC(W-13) DT(C-14):DA(W-14) DG(C-15):DC(W-15) DT(C-16):DA(W-16) chainA ( 4) THR140 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG143 0 0 0 0 0 0 0 0 0 9 13 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) TYR158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 27) LYS163 0 0 0 0 0 0 0 0 0 0 0 0 5 5 6 0 0 0 0 0 0 0 0 0 0 chainB ( 3) THR140 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG143 0 0 0 0 0 0 8 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR159 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) SER162 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS163 0 0 0 4 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 57) LYS58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 15 28 0 0 0 0 0 ( 63) ARG64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 18 2 0 0 0 ( 64) TYR65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 1 0 0 0 0 0 0 prot.sequence gkkTrgRvkikmefidnklrrYttfsKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclnspd/kkTrgRvkikmefidnklrryTtfSKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclnspd/dsaitlwqfllqllqkpqnkhmicwtsndgqfkllqaeevarlwgirknkpnmnydKlsRalRYyyvkniikkvngqkfvykfvsypeilnmsrndyihsglyssftlnsln >1hbx_DH:SRF-like; title=TERNARY COMPLEX OF SAP-1 AND SRF WITH SPECIFIC SRE DNA organism=HOMO SAPIENS DNA sequence DA(X-16):DT(F-16) DC(X-15):DG(F-15) DA(X-14):DT(F-14) DC(X-13):DG(F-13) DC(X-12):DG(F-12) DG(X-11):DC(F-11) DG(X-10):DC(F-10) DA(X-9):DT(F-9) DA(X-8):DT(F-8) DG(X-7):DC(F-7) DT(X-6):DA(F-6) DC(X-5):DG(F-5) DC(X-4):DG(F-4) DT(X-3):DA(F-3) DA(X-2):DT(F-2) DA(X-1):DT(F-1) DT(X1):DA(F1) DT(X2):DA(F2) DA(X3):DT(F3) DG(X4):DC(F4) DG(X5):DC(F5) DC(X6):DG(F6) DC(X7):DG(F7) DA(X8):DT(F8) DT(X9):DA(F9) chainD ( 3) THR140 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG143 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 8 0 0 0 0 0 0 0 0 0 ( 21) TYR158 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS163 0 0 0 0 0 0 0 0 0 0 5 6 6 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 55) ASP57 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) LYS58 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG61 0 0 0 0 0 23 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG64 0 0 0 0 18 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR65 0 0 0 0 0 0 0 3 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkTrgRvkikmefidnklrrYttfsKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclnspd/saitlwqfllqllqkpqnkhmicwtsndgqfkllqaeevarlwgirknkpnmnyDKlsRalRYyyvkniikkvngqkfvykfvsypeilnmsrndyihsglyssftlns >1hcq_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF THE ESTROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO DNA: HOW RECEPTORS DISCRIMINATE BETWEEN THEIR RESPONSE ELEMENTS organism=Homo sapiens DNA sequence DC(C2):DG(D36) DA(C3):DT(D35) DG(C4):DC(D34) DG(C5):DC(D33) DT(C6):DA(D32) DC(C7):DG(D31) DA(C8):DT(D30) DC(C9):DG(D29) DA(C10):DT(D28) DG(C11):DC(D27) DT(C12):DA(D26) DG(C13):DC(D25) DA(C14):DT(D24) DC(C15):DG(D23) DC(C16):DG(D22) DT(C17):DA(D21) DG(C18):DC(D20) chainA ( 25) GLU25 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS28 0 3 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ALA29 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 32) LYS32 0 0 1 8 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG33 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 chainB ( 22) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 ( 25) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 4 0 ( 26) ALA29 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 29) LYS32 0 0 0 0 0 0 0 0 0 0 0 0 3 7 1 0 0 ( 30) ARG33 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 prot.sequence mketrycavcndyasgyhygvwscEgcKAffKRsiqghndymcpatnqctidknrrkscqacrlrkcyevgmmk/trycavcndyasgyhygvwscEgcKAffKRsiqghndymcpatnqctidknrrkscqacrlrkcyevgmmk >1hcq_E:Glucocorticoid_receptor-like_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF THE ESTROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO DNA: HOW RECEPTORS DISCRIMINATE BETWEEN THEIR RESPONSE ELEMENTS organism=Homo sapiens DNA sequence DC(G2):DG(H36) DA(G3):DT(H35) DG(G4):DC(H34) DG(G5):DC(H33) DT(G6):DA(H32) DC(G7):DG(H31) DA(G8):DT(H30) DC(G9):DG(H29) DA(G10):DT(H28) DG(G11):DC(H27) DT(G12):DA(H26) DG(G13):DC(H25) DA(G14):DT(H24) DC(G15):DG(H23) DC(G16):DG(H22) DT(G17):DA(H21) DG(G18):DC(H20) chainE ( 25) GLU25 0 0 1 9 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS28 0 3 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ALA29 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 32) LYS32 0 0 1 8 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG33 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 prot.sequence mketrycavcndyasgyhygvwscEgcKAffKRsiqghndymcpatnqctidknrrkscqacrlrkcyevgmmk >1hcq_EF:Glucocorticoid_receptor-like_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF THE ESTROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO DNA: HOW RECEPTORS DISCRIMINATE BETWEEN THEIR RESPONSE ELEMENTS organism=Homo sapiens DNA sequence DC(H20):DG(G18) DA(H21):DT(G17) DG(H22):DC(G16) DG(H23):DC(G15) DT(H24):DA(G14) DC(H25):DG(G13) DA(H26):DT(G12) DC(H27):DG(G11) DT(H28):DA(G10) DG(H29):DC(G9) DT(H30):DA(G8) DG(H31):DC(G7) DA(H32):DT(G6) DC(H33):DG(G5) DC(H34):DG(G4) DT(H35):DA(G3) DG(H36):DC(G2) chainE ( 25) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 5 9 1 0 0 ( 28) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 3 0 ( 29) ALA29 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 32) LYS32 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 0 ( 33) ARG33 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 chainF ( 24) GLU25 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ALA29 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 31) LYS32 0 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG33 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 prot.sequence mketrycavcndyasgyhygvwscEgcKAffKRsiqghndymcpatnqctidknrrkscqacrlrkcyevgmmk/ketrycavcndyasgyhygvwscEgcKAffKRsiqgdymcpatnqctidknrrkscqacrlrkcyevgmmk >1hcr_A:Homeodomain-like; title=HIN RECOMBINASE BOUND TO DNA: THE ORIGIN OF SPECIFICITY IN MAJOR AND MINOR GROOVE INTERACTIONS organism=? DNA sequence DT(C17):DA(B15) DC(C18):DG(B14) DT(C19):DA(B13) DT(C20):DA(B12) DA(C21):DT(B11) DT(C22):DA(B10) DC(C23):DG(B9) DA(C24):DT(B8) DA(C25):DT(B7) DA(C26):DT(B6) DA(C27):DT(B5) DA(C28):DT(B4) DC(C29):DG(B3) chainA ( 2) ARG140 0 0 0 0 0 0 0 2 3 13 7 0 0 ( 36) SER174 0 0 0 0 7 11 1 0 0 0 0 0 0 ( 37) THR175 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 39) TYR177 0 0 13 3 0 0 0 0 0 0 0 0 0 ( 40) ARG178 0 0 0 0 0 0 8 10 0 0 0 0 0 ( 47) ILE185 5 7 0 0 0 0 0 0 0 0 0 0 0 ( 48) LYS186 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 49) LYS187 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 52) ASN190 0 0 0 0 0 9 8 0 0 0 0 0 0 prot.sequence gRprainkheqeqisrllekghprqqlaiifgigvSTlYRyfpassIKKrmN >1hdd_C:Homeodomain-like; title=CRYSTAL STRUCTURE OF AN ENGRAILED HOMEODOMAIN-DNA COMPLEX AT 2.8 ANGSTROMS RESOLUTION: A FRAMEWORK FOR UNDERSTANDING HOMEODOMAIN-DNA INTERACTIONS organism=Drosophila melanogaster DNA sequence DT(A2):DA(B42) DT(A3):DA(B41) DT(A4):DA(B40) DG(A5):DC(B39) DC(A6):DG(B38) DC(A7):DG(B37) DA(A8):DT(B36) DT(A9):DA(B35) DG(A10):DC(B34) DT(A11):DA(B33) DA(A12):DT(B32) DA(A13):DT(B31) DT(A14):DA(B30) DT(A15):DA(B29) DA(A16):DT(B28) DC(A17):DG(B27) DC(A18):DG(B26) DT(A19):DA(B25) DA(A20):DT(B24) DA(A21):DT(B23) chainC ( 1) ARG3 0 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 0 0 ( 3) ARG5 0 0 0 0 0 0 0 0 10 8 2 0 0 0 0 0 0 0 0 0 ( 45) ILE47 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 ( 48) GLN50 0 0 0 0 0 0 0 0 0 0 0 0 2 0 4 0 0 0 0 0 ( 49) ASN51 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence RpRtafsseqlarlkrefnenrylterrrqqlsselglneaqikIwfQNkraKikks >1hdd_CD:Homeodomain-like; title=CRYSTAL STRUCTURE OF AN ENGRAILED HOMEODOMAIN-DNA COMPLEX AT 2.8 ANGSTROMS RESOLUTION: A FRAMEWORK FOR UNDERSTANDING HOMEODOMAIN-DNA INTERACTIONS organism=Drosophila melanogaster DNA sequence DT(B23):DA(A21) DT(B24):DA(A20) DA(B25):DT(A19) DG(B26):DC(A18) DG(B27):DC(A17) DT(B28):DA(A16) DA(B29):DT(A15) DA(B30):DT(A14) DT(B31):DA(A13) DT(B32):DA(A12) DA(B33):DT(A11) DC(B34):DG(A10) DA(B35):DT(A9) DT(B36):DA(A8) DG(B37):DC(A7) DG(B38):DC(A6) DC(B39):DG(A5) DA(B40):DT(A4) DA(B41):DT(A3) DA(B42):DT(A2) chainC ( 1) ARG3 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 ( 3) ARG5 0 0 0 0 0 0 0 0 0 2 8 10 0 0 0 0 0 0 0 0 ( 45) ILE47 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 ( 48) GLN50 0 0 0 0 0 4 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ASN51 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainD ( 45) ILE47 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) GLN50 1 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RpRtafsseqlarlkrefnenrylterrrqqlsselglneaqikIwfQNkraKikks/rprtafsseqlarlkrefnenrylterrrqqlsselglneaqikIwfQnkrakikks >1hf0_AB:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF OCT-1 BOUND TO DNA AS A DIMER organism=HOMO SAPIENS DNA sequence DC(N1):DG(M22) DT(N2):DA(M21) DC(N3):DG(M20) DC(N4):DG(M19) DA(N5):DT(M18) DT(N6):DA(M17) DT(N7):DA(M16) DT(N8):DA(M15) DG(N9):DC(M14) DC(N10):DG(M13) DC(N11):DG(M12) DT(N12):DA(M11) DT(N13):DA(M10) DT(N14):DA(M9) DC(N15):DG(M8) DA(N16):DT(M7) DA(N17):DT(M6) DA(N18):DT(M5) DT(N19):DA(M4) DG(N20):DC(M3) DT(N21):DA(M2) DG(N22):DC(M1) chainA ( 22) GLN27 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 38) SER43 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN44 0 0 0 0 0 0 0 0 0 0 1 13 8 0 0 0 0 0 0 0 0 0 ( 40) THR45 0 0 0 0 0 0 0 0 5 6 5 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER48 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 0 14 16 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG102 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG105 0 0 0 0 0 0 5 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG146 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) VAL147 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) SER150 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) ASN151 0 0 0 0 1 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) GLN154 0 0 0 15 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) GLN27 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 38) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 39) GLN44 0 0 0 0 0 0 0 0 0 0 2 11 3 0 0 0 0 0 0 0 0 0 ( 40) THR45 0 0 0 0 0 0 0 0 0 0 0 0 8 7 7 0 0 0 0 0 0 0 ( 43) SER48 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 15 0 0 0 0 0 0 ( 71) ARG102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 74) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 7 0 0 0 0 0 (116) VAL147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 (119) SER150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (120) ASN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 (123) GLN154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 16 0 0 prot.sequence leeleqfaktfkqrriklgftQgdvglamgklygndfSQTtiSRfealnlsfknmsklkpllekwlndaeRkkRtsietnirvaleksflenqkptseeitmiadqlnmekeviRVwfSNrrQkekri/leeleqfaktfkqrriklgftQgdvglamgklygndfSQTtiSRfealnlsfknmsklkpllekwlndaeRkkRtsietnirvaleksflenqkptseeitmiadqlnmekevirVwfSNrrQkekri >1hf0_B:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF OCT-1 BOUND TO DNA AS A DIMER organism=HOMO SAPIENS DNA sequence DC(N1):DG(M22) DT(N2):DA(M21) DC(N3):DG(M20) DC(N4):DG(M19) DA(N5):DT(M18) DT(N6):DA(M17) DT(N7):DA(M16) DT(N8):DA(M15) DG(N9):DC(M14) DC(N10):DG(M13) DC(N11):DG(M12) DT(N12):DA(M11) DT(N13):DA(M10) DT(N14):DA(M9) DC(N15):DG(M8) DA(N16):DT(M7) DA(N17):DT(M6) DA(N18):DT(M5) DT(N19):DA(M4) DG(N20):DC(M3) DT(N21):DA(M2) DG(N22):DC(M1) chainB ( 22) GLN27 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 38) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 39) GLN44 0 0 0 0 0 0 0 0 0 0 2 11 3 0 0 0 0 0 0 0 0 0 ( 40) THR45 0 0 0 0 0 0 0 0 0 0 0 0 8 7 7 0 0 0 0 0 0 0 ( 43) SER48 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 15 0 0 0 0 0 0 ( 71) ARG102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 74) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 7 0 0 0 0 0 (116) VAL147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 (119) SER150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (120) ASN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 (123) GLN154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 16 0 0 prot.sequence leeleqfaktfkqrriklgftQgdvglamgklygndfSQTtiSRfealnlsfknmsklkpllekwlndaeRkkRtsietnirvaleksflenqkptseeitmiadqlnmekevirVwfSNrrQkekri >1hht_R:DNA/RNA_polymerases; title=RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 PLUS TEMPLATE organism=BACTERIOPHAGE PHI-6 DNA sequence DT(F3) DT(F4) DT(F5) DC(F6) DC(F7) chainR ( 26) GLN26 4 0 0 0 0 ( 30) ARG30 5 3 0 0 0 (144) LYS144 0 0 0 0 2 (202) VAL202 0 0 3 0 0 (204) ARG204 0 0 17 3 0 (272) ALA272 0 0 5 0 0 (288) GLN288 0 0 0 0 13 (393) SER393 0 0 5 0 0 (398) THR398 0 0 0 1 0 (530) TYR530 0 0 2 0 0 (626) ASN626 0 0 0 1 0 (629) GLN629 0 0 0 23 0 (633) THR633 0 0 0 0 5 (634) GLU634 0 0 0 0 13 (642) HIS642 0 0 0 0 5 (646) MET646 0 0 0 0 4 prot.sequence prrapafplsdikaqmlfannikaqQaskRsfkegaietyegllsvdprflsfknelsryltdhfpanvdeygrvygngvrtnffgmrhmngfpmipatwplasnlkkradadladgpvserdnllfraavrlmfsdlepvplKirkgsstcipyfsndmgtkieiaeralekaeeagnlmlqgkfddayqlhqmggayyvVyRaqstdaitldpktgkfvskdrmvadfeyavtggeqgslfaaskdasrlkeqygidvpdgffcerrrtAmggpfalnapimavaQpvrnkiyskyaytfhhttrlnkeekvkewslcvatdvsdhdtfwpgwlrdlicdellnmgyapwwvklfetslklpvyvgapapeqghtllgdpsnpdlevglsSgqgaTdlmgtllmsitylvmqldhtaphlnsrikdmpsacrfldsywqgheeirqisksddamlgwtkgralvgghrlfemlkegkvnpspymkisyehggaflgdillydsrrepgsaifvgninsmlnnqfspeYgvqsgvrdrskrkrpfpglawasmkdtygacpiysdvleaiercwwnafgesyrayredmlkrdtlelsryvasmarqaglaeltpidlevladpNklQykwTEadvsaniHevlMhgvsvekterflrsvmpr >1hjb_ABC:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DA(G2):DT(H26) DA(G3):DT(H25) DG(G4):DC(H24) DA(G5):DT(H23) DT(G6):DA(H22) DT(G7):DA(H21) DT(G8):DA(H20) DC(G9):DG(H19) DC(G10):DG(H18) DA(G11):DT(H17) DA(G12):DT(H16) DA(G13):DT(H15) DC(G14):DG(H14) DT(G15):DA(H13) DC(G16):DG(H12) DT(G17):DA(H11) DG(G18):DC(H10) DT(G19):DA(H9) DG(G20):DC(H8) DG(G21):DC(H7) DT(G22):DA(H6) DT(G23):DA(H5) DG(G24):DC(H4) DC(G25):DG(H3) DG(G26):DC(H2) chainA ( 11) ARG278 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ASN281 0 0 0 1 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ALA284 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL285 0 0 0 0 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) SER288 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG289 0 0 0 0 0 0 4 15 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 11) ARG278 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ASN282 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG289 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 21) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 ( 83) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 (111) VAL170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (112) ASP171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 (115) ARG174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 10 2 0 0 0 0 0 (118) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 11 5 0 0 0 0 prot.sequence dkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkq/dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql/gelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepRrh >1hjb_D:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER organism=? DNA sequence DC(J2):DG(I26) DG(J3):DC(I25) DC(J4):DG(I24) DA(J5):DT(I23) DA(J6):DT(I22) DC(J7):DG(I21) DC(J8):DG(I20) DA(J9):DT(I19) DC(J10):DG(I18) DA(J11):DT(I17) DG(J12):DC(I16) DA(J13):DT(I15) DG(J14):DC(I14) DT(J15):DA(I13) DT(J16):DA(I12) DT(J17):DA(I11) DG(J18):DC(I10) DG(J19):DC(I9) DA(J20):DT(I8) DA(J21):DT(I7) DA(J22):DT(I6) DT(J23):DA(I5) DC(J24):DG(I4) DT(J25):DA(I3) DT(J26):DA(I2) chainD ( 11) ARG278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 2 0 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 22) ARG289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 4 0 0 0 0 0 0 prot.sequence dkhsdeykirRerNniaVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlp >1hjb_DEF:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DA(I2):DT(J26) DA(I3):DT(J25) DG(I4):DC(J24) DA(I5):DT(J23) DT(I6):DA(J22) DT(I7):DA(J21) DT(I8):DA(J20) DC(I9):DG(J19) DC(I10):DG(J18) DA(I11):DT(J17) DA(I12):DT(J16) DA(I13):DT(J15) DC(I14):DG(J14) DT(I15):DA(J13) DC(I16):DG(J12) DT(I17):DA(J11) DG(I18):DC(J10) DT(I19):DA(J9) DG(I20):DC(J8) DG(I21):DC(J7) DT(I22):DA(J6) DT(I23):DA(J5) DG(I24):DC(J4) DC(I25):DG(J3) DG(I26):DC(J2) chainD ( 11) ARG278 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ASN281 0 0 0 2 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL285 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) SER288 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG289 0 0 0 0 0 0 4 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 11) ARG278 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 0 0 4 5 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ASN282 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 1 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG289 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 ( 83) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 7 0 0 (112) ASP171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 (115) ARG174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 14 2 0 0 0 0 0 (118) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 6 0 0 0 0 prot.sequence dkhsdeykirRerNniaVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlp/dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlp/gelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitvDgpRepRrh >1hjc_D:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER organism=MUS MUSCULUS DNA sequence DA(E12):DT(F16) DA(E13):DT(F15) DC(E14):DG(F14) DT(E15):DA(F13) DC(E16):DG(F12) DT(E17):DA(F11) DG(E18):DC(F10) DT(E19):DA(F9) DG(E20):DC(F8) DG(E21):DC(F7) DT(E22):DA(F6) DT(E23):DA(F5) DG(E24):DC(F4) DC(E25):DG(F3) DG(E26):DC(F2) chainD ( 21) ARG80 0 0 0 0 0 12 12 0 0 0 0 0 0 0 0 ( 83) ARG142 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 (111) VAL170 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 (112) ASP171 0 0 0 0 0 0 0 1 6 6 0 0 0 0 0 (115) ARG174 0 0 0 0 0 0 0 20 8 1 0 0 0 0 0 (118) ARG177 0 0 0 0 0 0 0 0 9 11 6 0 0 0 0 prot.sequence gelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepR >1hlo_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF AN INTACT HUMAN MAX-DNA COMPLEX: NEW INSIGHTS INTO MECHANISMS OF TRANSCRIPTIONAL CONTROL organism=Homo sapiens DNA sequence DC(C102):DG(D126) DA(C103):DT(D125) DC(C104):DG(D124) DC(C105):DG(D123) DA(C106):DT(D122) DC(C107):DG(D121) DG(C108):DC(D120) DT(C109):DA(D119) DG(C110):DC(D118) DG(C111):DC(D117) DT(C112):DA(D116) chainA ( 16) HIS18 0 0 0 0 0 0 0 7 11 5 0 ( 17) ASN19 0 0 0 0 0 0 0 4 0 0 0 ( 20) GLU22 0 0 0 0 0 0 2 11 7 0 0 ( 23) ARG25 0 0 0 0 0 0 0 0 9 1 0 ( 24) ARG26 0 0 0 0 0 10 9 0 0 0 0 chainB ( 9) HIS18 0 0 9 15 3 0 0 0 0 0 0 ( 10) ASN19 0 0 0 0 4 0 0 0 0 0 0 ( 12) LEU21 1 0 0 0 0 0 0 0 0 0 0 ( 13) GLU22 0 0 2 9 9 0 0 0 0 0 0 ( 16) ARG25 0 0 2 9 1 0 0 0 0 0 0 ( 17) ARG26 0 0 0 0 0 7 11 0 0 0 0 prot.sequence nddievesdadkrahHNalErkRRdhikdsfhslrdsvpslqgekasraqildkateyiqymrrknhthqqdiddlkrqn/sdadkrahHNaLErkRRdhikdsfhslrdsvpslqgekasraqildkateyiqymrrknhthqqdiddlkrqn >1hlo_B:HLH,_helix-loop-helix_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF AN INTACT HUMAN MAX-DNA COMPLEX: NEW INSIGHTS INTO MECHANISMS OF TRANSCRIPTIONAL CONTROL organism=Homo sapiens DNA sequence DA(D116):DT(C112) DC(D117):DG(C111) DC(D118):DG(C110) DA(D119):DT(C109) DC(D120):DG(C108) DG(D121):DC(C107) DT(D122):DA(C106) DG(D123):DC(C105) DG(D124):DC(C104) DT(D125):DA(C103) DG(D126):DC(C102) chainB ( 9) HIS18 0 0 0 0 0 0 3 15 9 0 0 ( 10) ASN19 0 0 0 0 0 0 4 0 0 0 0 ( 12) LEU21 0 0 0 0 0 0 0 0 0 0 1 ( 13) GLU22 0 0 0 0 0 0 9 9 2 0 0 ( 16) ARG25 0 0 0 0 0 0 1 9 2 0 0 ( 17) ARG26 0 0 0 0 11 7 0 0 0 0 0 prot.sequence sdadkrahHNaLErkRRdhikdsfhslrdsvpslqgekasraqildkateyiqymrrknhthqqdiddlkrqn >1hlv_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF CENP-B(1-129) COMPLEXED WITH THE CENP-B BOX DNA organism=HOMO SAPIENS DNA sequence DG(B1):DC(C21) DC(B2):DG(C20) DC(B3):DG(C19) DT(B4):DA(C18) DT(B5):DA(C17) DC(B6):DG(C16) DG(B7):DC(C15) DT(B8):DA(C14) DT(B9):DA(C13) DG(B10):DC(C12) DG(B11):DC(C11) DA(B12):DT(C10) DA(B13):DT(C9) DA(B14):DT(C8) DC(B15):DG(C7) DG(B16):DC(C6) DG(B17):DC(C5) DG(B18):DC(C4) DA(B19):DT(C3) DT(B20):DA(C2) DT(B21):DA(C1) chainA ( 5) ARG5 0 0 0 0 0 0 0 12 9 9 0 0 0 0 0 0 0 0 0 0 0 ( 7) GLN7 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER40 0 0 0 0 3 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR41 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER43 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR44 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LYS70 0 0 0 0 0 0 0 0 0 0 0 7 3 1 0 0 0 0 0 0 0 (119) SER119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 (120) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 9 0 0 (124) ASP124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 (125) ARG125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 15 2 0 0 0 0 prot.sequence mgpkRrQltfreksriiqeveenpdlrkgeiarrfnipPSTlSTilknkrailaserkygvastcrkTnKlspydkleglliawfqqiraaglpvkgiilkekalriaeelgmddftaSNgwlDRfrrrrs >1hlz_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA- BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT organism=Homo sapiens DNA sequence DC(D621):DG(C619) DT(D622):DA(C618) DG(D623):DC(C617) DA(D624):DT(C616) DC(D625):DG(C615) DC(D626):DG(C614) DT(D627):DA(C613) DA(D628):DT(C612) DG(D629):DC(C611) DT(D630):DA(C610) DG(D631):DC(C609) DA(D632):DT(C608) DC(D633):DG(C607) DC(D634):DG(C606) DT(D635):DA(C605) DA(D636):DT(C604) DG(D637):DC(C603) DT(D638):DA(C602) DT(D639):DA(C601) DG(D640):DC(C600) chainA ( 22) GLU19 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS22 0 0 0 0 1 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG26 0 0 0 4 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG27 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ARG75 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainB ( 24) GLU19 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 ( 27) LYS22 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 0 0 0 0 0 ( 31) ARG26 0 0 0 0 0 0 0 0 0 0 0 3 12 1 0 0 0 0 0 0 ( 32) ARG27 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 ( 79) PHE73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 ( 81) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 1 prot.sequence vllckvcgdvasgfhygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrfgRip/gmvllckvcgdvasgfhygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrFgR >1hlz_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA- BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT organism=Homo sapiens DNA sequence DC(D621):DG(C619) DT(D622):DA(C618) DG(D623):DC(C617) DA(D624):DT(C616) DC(D625):DG(C615) DC(D626):DG(C614) DT(D627):DA(C613) DA(D628):DT(C612) DG(D629):DC(C611) DT(D630):DA(C610) DG(D631):DC(C609) DA(D632):DT(C608) DC(D633):DG(C607) DC(D634):DG(C606) DT(D635):DA(C605) DA(D636):DT(C604) DG(D637):DC(C603) DT(D638):DA(C602) DT(D639):DA(C601) DG(D640):DC(C600) chainB ( 24) GLU19 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 ( 27) LYS22 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 0 0 0 0 0 ( 31) ARG26 0 0 0 0 0 0 0 0 0 0 0 3 12 1 0 0 0 0 0 0 ( 32) ARG27 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 ( 79) PHE73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 ( 81) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 1 prot.sequence gmvllckvcgdvasgfhygvlacEgcKgffRRsiqqniqykrclknencsivrinrnrcqqcrfkkclsvgmsrdavrFgR >1hry_A:HMG-box; title=THE 3D STRUCTURE OF THE HUMAN SRY-DNA COMPLEX SOLVED BY MULTID- DIMENSIONAL HETERONUCLEAR-EDITED AND-FILTERED NMR organism=? DNA sequence DG(C1):DC(B8) DT(C2):DA(B7) DT(C3):DA(B6) DT(C4):DA(B5) DG(C5):DC(B4) DT(C6):DA(B3) DG(C7):DC(B2) DC(C8):DG(B1) chainA ( 8) ASN10 0 0 0 4 10 0 0 0 ( 10) PHE12 0 0 3 12 0 0 0 0 ( 11) ILE13 0 0 13 6 0 0 0 0 ( 18) ARG20 2 0 0 0 0 0 0 0 ( 31) SER33 6 1 0 0 0 0 0 0 ( 34) SER36 0 3 0 0 0 0 0 0 ( 72) TYR74 0 0 0 0 1 19 1 0 prot.sequence drvkrpmNaFIvwsrdqRrkmalenprmrnSeiSkqlgyqwkmlteaekwpffqeaqklqamhrekypnykYr >1hrz_A:HMG-box; title=THE 3D STRUCTURE OF THE HUMAN SRY-DNA COMPLEX SOLVED BY MULTI- DIMENSIONAL HETERONUCLEAR-EDITED AND-FILTERED NMR organism=? DNA sequence DG(C9):DC(B8) DT(C10):DA(B7) DT(C11):DA(B6) DT(C12):DA(B5) DG(C13):DC(B4) DT(C14):DA(B3) DG(C15):DC(B2) DC(C16):DG(B1) chainA ( 8) ASN10 0 0 0 2 9 0 0 0 ( 10) PHE12 0 0 3 11 0 0 0 0 ( 11) ILE13 0 0 11 5 0 0 0 0 ( 15) ARG17 0 1 0 0 0 0 0 0 ( 18) ARG20 2 2 0 0 0 0 0 0 ( 31) SER33 5 0 0 0 0 0 0 0 ( 33) ILE35 1 0 0 0 0 0 0 0 ( 34) SER36 0 3 0 0 0 0 0 0 ( 72) TYR74 0 0 0 0 1 18 0 0 prot.sequence drvkrpmNaFIvwsRdqRrkmalenprmrnSeISkqlgyqwkmlteaekwpffqeaqklqamhrekypnykYr >1hu0_A:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN HOGG1-DNA BOROHYDRIDE TRAPPED INTERMEDIATE COMPLEX organism=Homo sapiens DNA sequence DG(D1):DC(E30) DG(D2):DC(E29) DT(D3):DA(E28) DA(D4):DT(E27) DG(D5):DC(E26) DA(D6):DT(E25) DC(D7):DG(E24) DC(D8):DA(E22) DT(D9):DC(E21) DG(D10):DC(E20) DG(D11):DT(E19) DA(D12):DG(E18) DC(D13):DC(E17) DG(D14):DG(E16) chainA (138) ASN149 0 0 0 0 0 0 33 13 0 0 0 0 0 0 (139) ASN150 0 0 0 0 0 0 0 2 1 0 0 0 0 0 (140) ASN151 0 0 0 0 0 0 0 4 0 1 0 0 0 0 (143) ARG154 0 0 0 0 0 0 0 10 12 0 0 0 0 0 (192) TYR203 0 0 0 0 0 0 14 17 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (196) TYR207 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (282) PRO293 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (283) GLN294 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficsSNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpsPQtnkelgnffrslwgpyagwaqavlfsadlrq >1hut_H:Trypsin-like_serine_proteases; title=THE STRUCTURE OF ALPHA-THROMBIN INHIBITED BY A 15-MER SINGLE-STRANDED DNA APTAMER organism=HOMO SAPIENS DNA sequence DG(D401) DG(D402) DT(D403) DT(D404) DG(D405) DG(D406) DT(D407) DG(D408) DT(D409) DG(D410) DG(D411) DT(D412) DT(D413) DG(D414) DG(D415) chainH ( 9) ILE24 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 66) HIS71 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 ( 70) ARG75 13 0 0 0 0 14 0 17 0 0 0 0 0 0 0 ( 71) TYR76 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 72) GLU77 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 ( 73) ARG77A 0 0 0 0 0 0 0 3 0 15 0 0 0 0 0 ( 75) ILE79 0 0 0 0 0 0 18 0 3 0 0 0 0 0 0 (114) TYR117 0 0 0 0 0 0 5 0 5 0 0 0 0 0 0 prot.sequence ivegsdaeIgmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkHsrtRYeRnIekismlekiyihprynwrenldrdialmklkkpvafsdYihpvclpdretaasllqagykgrvtgwgnlketwgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfge >1hut_HL:Trypsin-like_serine_proteases; title=THE STRUCTURE OF ALPHA-THROMBIN INHIBITED BY A 15-MER SINGLE-STRANDED DNA APTAMER organism=HOMO SAPIENS DNA sequence DG(D401) DG(D402) DT(D403) DT(D404) DG(D405) DG(D406) DT(D407) DG(D408) DT(D409) DG(D410) DG(D411) DT(D412) DT(D413) DG(D414) DG(D415) chainL chainH ( 9) ILE24 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 66) HIS71 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 ( 70) ARG75 13 0 0 0 0 14 0 17 0 0 0 0 0 0 0 ( 71) TYR76 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 72) GLU77 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 ( 73) ARG77A 0 0 0 0 0 0 0 3 0 15 0 0 0 0 0 ( 75) ILE79 0 0 0 0 0 0 18 0 3 0 0 0 0 0 0 (114) TYR117 0 0 0 0 0 0 5 0 5 0 0 0 0 0 0 prot.sequence ivegsdaeIgmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkHsrtRYeRnIekismlekiyihprynwrenldrdialmklkkpvafsdYihpvclpdretaasllqagykgrvtgwgnlketwgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfge/tfgsgeadCglrplfekksledkterellesyidgr >1huz_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF DNA POLYMERASE COMPLEXED WITH DNA AND CR-PCP organism=Rattus norvegicus DNA sequence DA(T4):DT(P8) DG(T5):DC(P7) DG(T6):DC(P6) DC(T7):DG(P5) DG(T8):DC(P4) DT(T9):DA(P3) DC(T10):DG(P2) DG(T11):DC(P1) chainA (225) LYS234 0 0 2 5 0 0 0 0 (262) TYR271 4 8 0 0 0 0 0 0 (267) ASP276 12 0 0 0 0 0 0 0 (270) ASN279 3 0 0 0 0 0 0 0 (274) ARG283 10 3 0 0 0 0 0 0 prot.sequence tlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrknedklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetKfmgvcqlpsendeneyphrridirlipkdqyycgvlYftgsDifNknmRahalekgftineytirplgvtgvageplpvdseqdifdyiqwryrepkdrs >1hw2_A:GntR_ligand-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ECHERICHIA COLI organism=Escherichia coli DNA sequence DC(E2):DG(D20) DA(E3):DT(D19) DT(E4):DA(D18) DC(E5):DG(D17) DT(E6):DA(D16) DG(E7):DC(D15) DG(E8):DC(D14) DT(E9):DA(D13) DC(E10):DG(D12) DG(E11):DC(D11) DG(E12):DC(D10) DA(E13):DT(D9) DC(E14):DG(D8) DC(E15):DG(D7) DA(E16):DT(D6) DG(E17):DC(D5) DA(E18):DT(D4) DT(E19):DA(D3) chainA ( 29) ARG35 0 0 0 0 2 10 2 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR44 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 39) ARG45 0 0 0 0 0 3 10 2 0 0 0 0 0 0 0 0 0 0 ( 40) THR46 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 ( 43) ARG49 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 ( 44) GLU50 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 59) HIS65 0 0 0 5 6 11 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spagfaeeyiiesiwnnrfppgtilpaeRelseligvTRTtlREvlqrlardgwltiqHgkptkvnnfwetsglniletlarldhesvpqlidnllsvrtnistifirtafrqhpdkaqevlatanevadhadafaeldynifrglafasgnpiyglilngmkglytrigrhyfanpearslalgfyhklsalcsegahdqvyetvrryghesgeiwhrmqk >1hw2_AB:Fatty_acid_responsive_transcription_factor_FadR,_C-terminal_domain;"Winged_helix"_DNA-binding_domain;GntR_ligand-binding_domain-like; title=FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ECHERICHIA COLI organism=Escherichia coli DNA sequence DC(E2):DG(D20) DA(E3):DT(D19) DT(E4):DA(D18) DC(E5):DG(D17) DT(E6):DA(D16) DG(E7):DC(D15) DG(E8):DC(D14) DT(E9):DA(D13) DC(E10):DG(D12) DG(E11):DC(D11) DG(E12):DC(D10) DA(E13):DT(D9) DC(E14):DG(D8) DC(E15):DG(D7) DA(E16):DT(D6) DG(E17):DC(D5) DA(E18):DT(D4) DT(E19):DA(D3) chainA ( 29) ARG35 0 0 0 0 2 10 2 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR44 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 39) ARG45 0 0 0 0 0 3 10 2 0 0 0 0 0 0 0 0 0 0 ( 40) THR46 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 ( 43) ARG49 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 ( 44) GLU50 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 59) HIS65 0 0 0 5 6 11 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 29) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 4 13 7 0 0 0 ( 38) THR44 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 ( 39) ARG45 0 0 0 0 0 0 0 0 0 0 0 1 10 6 0 0 0 0 ( 40) THR46 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 ( 43) ARG49 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 ( 44) GLU50 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 59) HIS65 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 2 0 0 prot.sequence spagfaeeyiiesiwnnrfppgtilpaeRelseligvTRTtlREvlqrlardgwltiqHgkptkvnnfwetsglniletlarldhesvpqlidnllsvrtnistifirtafrqhpdkaqevlatanevadhadafaeldynifrglafasgnpiyglilngmkglytrigrhyfanpearslalgfyhklsalcsegahdqvyetvrryghesgeiwhrmqk/spagfaeeyiiesiwnnrfppgtilpaeRelseligvTRTtlREvlqrlardgwltiqHgkptkvnnfwetsglniletlarldhesvpqlidnllsvrtnistifirtafrqhpdkaqevlatanevadhadafaeldynifrglafasgnpiyglilngmkglytrigrhyfanpearslalgfyhklsalcsegahdqvyetvrryghesgeiwhrmqk >1hwt_C:Zn2/Cys6_DNA-binding_domain; title=STRUCTURE OF A HAP1/DNA COMPLEX REVEALS DRAMATICALLY ASYMMETRIC DNA BINDING BY A HOMODIMERIC PROTEIN organism=Saccharomyces cerevisiae DNA sequence DG(A1):DC(B20) DC(A2):DG(B19) DG(A3):DC(B18) DC(A4):DG(B17) DT(A5):DA(B16) DA(A6):DT(B15) DT(A7):DA(B14) DT(A8):DA(B13) DA(A9):DT(B12) DT(A10):DA(B11) DC(A11):DG(B10) DG(A12):DC(B9) DC(A13):DG(B8) DT(A14):DA(B7) DA(A15):DT(B6) DT(A16):DA(B5) DT(A17):DA(B4) DA(A18):DT(B3) DG(A19):DC(B2) DC(A20):DG(B1) chainC ( 12) ARG70 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 13) LYS71 0 0 0 0 0 0 0 0 0 0 16 13 10 0 0 0 0 0 0 0 ( 14) VAL72 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 prot.sequence riplscticrkRKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektl >1hwt_CD:Zn2/Cys6_DNA-binding_domain;Leucine_zipper_domain; title=STRUCTURE OF A HAP1/DNA COMPLEX REVEALS DRAMATICALLY ASYMMETRIC DNA BINDING BY A HOMODIMERIC PROTEIN organism=Saccharomyces cerevisiae DNA sequence DG(A1):DC(B20) DC(A2):DG(B19) DG(A3):DC(B18) DC(A4):DG(B17) DT(A5):DA(B16) DA(A6):DT(B15) DT(A7):DA(B14) DT(A8):DA(B13) DA(A9):DT(B12) DT(A10):DA(B11) DC(A11):DG(B10) DG(A12):DC(B9) DC(A13):DG(B8) DT(A14):DA(B7) DA(A15):DT(B6) DT(A16):DA(B5) DT(A17):DA(B4) DA(A18):DT(B3) DG(A19):DC(B2) DC(A20):DG(B1) chainC ( 12) ARG70 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 13) LYS71 0 0 0 0 0 0 0 0 0 0 16 13 10 0 0 0 0 0 0 0 ( 14) VAL72 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG57 0 0 0 0 0 0 0 10 11 20 0 0 0 0 0 0 0 0 0 0 ( 5) ARG59 0 0 0 0 0 3 7 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS71 0 16 16 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence riplscticrkRKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektl/rkRnRiplscticrkrKvkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektl >1hwt_GH:Zn2/Cys6_DNA-binding_domain;Leucine_zipper_domain; title=STRUCTURE OF A HAP1/DNA COMPLEX REVEALS DRAMATICALLY ASYMMETRIC DNA BINDING BY A HOMODIMERIC PROTEIN organism=Saccharomyces cerevisiae DNA sequence DG(F1):DC(E20) DC(F2):DG(E19) DT(F3):DA(E18) DA(F4):DT(E17) DA(F5):DT(E16) DT(F6):DA(E15) DA(F7):DT(E14) DG(F8):DC(E13) DC(F9):DG(E12) DG(F10):DC(E11) DA(F11):DT(E10) DT(F12):DA(E9) DA(F13):DT(E8) DA(F14):DT(E7) DT(F15):DA(E6) DA(F16):DT(E5) DG(F17):DC(E4) DC(F18):DG(E3) DG(F19):DC(E2) DC(F20):DG(E1) chainG ( 12) ARG70 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 13) LYS71 0 0 0 0 0 0 0 16 13 9 0 0 0 0 0 0 0 0 0 0 ( 14) VAL72 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG57 0 0 0 0 0 0 0 0 0 0 14 9 9 0 0 0 0 0 0 0 ( 4) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 8 8 5 0 0 0 0 0 ( 16) LYS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 13 17 0 prot.sequence riplscticrkRKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektl/kRnRiplscticrkrKvkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektl >1hys_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A POLYPURINE TRACT RNA:DNA organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DC(F878) DT(F879) DT(F880) DT(F881) DT(F882) DC(F883) DT(F884) DT(F885) DT(F886) DT(F887) DA(F888) DA(F889) DA(F890) DA(F891) DA(F892) DG(F893) DT(F894) DG(F895) DG(F896) DC(F897) DT(F898) DG(F899) chainA (115) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (258) GLN258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (266) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (448) ARG448 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiQklvgklnWasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiQklvgklnWasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvkl >1i3j_A:DNA-binding_domain_of_intron-encoded_endonucleases; title=CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF INTRON ENDONUCLEASE I- TEVI WITH ITS SUBSTRATE organism=Enterobacteria phage T4 DNA sequence DT(B2):DA(C51) DC(B3):DG(C50) DT(B4):DA(C49) DT(B5):DA(C48) DG(B6):DC(C47) DG(B7):DC(C46) DG(B8):DC(C45) DT(B9):DA(C44) DC(B10):DG(C43) DT(B11):DA(C42) DA(B12):DT(C41) DC(B13):DG(C40) DC(B14):DG(C39) DG(B15):DC(C38) DT(B16):DA(C37) DT(B17):DA(C36) DT(B18):DA(C35) DA(B19):DT(C34) DA(B20):DT(C33) DT(B21):DA(C32) chainA ( 10) GLN158 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG168 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG170 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ASN175 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER176 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) PHE177 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) HIS182 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ILE190 0 0 0 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 ( 46) MET194 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 ( 51) PRO199 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 ( 53) ASN201 0 0 0 0 0 0 0 0 0 0 1 9 6 0 0 0 0 0 0 0 ( 77) SER225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 78) SER226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 80) LEU228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 ( 82) THR230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 ( 83) TYR231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 prot.sequence kfckcgvriQtsaytcskcRnRsgenNSFfnhkHsditkskIsekMkgkkPsNikkiscdgvifdcaadaarhfkiSSgLvTYrvksdkwnwfyin >1i6h_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(D1) DA(D2) DA(D3) DT(D4) DG(D5) DC(D6) DC(D7) DT(D8) DG(D9) DG(D10) DT(D11) DC(D12) DT(D13) chainA (414) PRO448 0 0 0 0 2 0 0 0 0 0 0 0 0 (797) THR831 0 0 0 6 0 0 0 0 0 0 0 0 0 (798) ALA832 0 0 0 3 0 0 0 0 0 0 0 0 0 (1322) ARG1386 9 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpseddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqapvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi >1i6h_AB: title=RNA POLYMERASE II ELONGATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(D1) DA(D2) DA(D3) DT(D4) DG(D5) DC(D6) DC(D7) DT(D8) DG(D9) DG(D10) DT(D11) DC(D12) DT(D13) chainA (414) PRO448 0 0 0 0 2 0 0 0 0 0 0 0 0 (797) THR831 0 0 0 6 0 0 0 0 0 0 0 0 0 (798) ALA832 0 0 0 3 0 0 0 0 0 0 0 0 0 (1322) ARG1386 9 0 0 0 0 0 0 0 0 0 0 0 0 chainB (970) HIS1097 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpseddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqapvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgagvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrHmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >1i6j_A:DNA/RNA_polymerases; title=CRYSTAL STRUCTURE OF A PSEUDO-16-MER DNA WITH STACKED GUANINES AND TWO G-A MISPAIRS COMPLEXED WITH THE N-TERMINAL FRAGMENT OF MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE organism=Moloney murine leukemia virus DNA sequence DG(B1):DC(C16) DT(B2):DA(C15) DC(B3):DG(C14) DG(B4):DC(C13) DT(B5):DA(C12) DC(B6):DG(C11) chainA ( 77) LEU99 22 0 0 0 0 0 ( 90) VAL112 2 0 0 0 0 0 ( 92) ASP114 8 0 0 0 0 0 ( 94) ARG116 8 12 3 0 0 0 prot.sequence mtwlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >1iaw_AB: title=CRYSTAL STRUCTURE OF NAEI COMPLEXED WITH 17MER DNA organism=LECHEVALIERIA AEROCOLONIGENES DNA sequence DG(E2):DC(F17) DC(E3):DG(F16) DC(E4):DG(F15) DA(E5):DT(F14) DC(E6):DG(F13) DG(E7):DC(F12) DC(E8):DG(F11) DC(E9):DG(F10) DG(E10):DC(F9) DG(E11):DC(F8) DC(E12):DG(F7) DG(E13):DC(F6) DT(E14):DA(F5) DG(E15):DC(F4) DG(E16):DC(F3) DC(E17):DG(F2) chainA ( 50) LYS59 0 0 0 0 0 8 5 1 0 0 0 0 0 0 0 0 ( 51) THR60 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 54) THR63 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 ( 97) MET106 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 (135) ASN144 0 0 0 0 5 15 8 0 0 0 0 0 0 0 0 0 (136) ARG145 0 0 0 0 0 2 16 1 0 0 0 0 0 0 0 0 (137) ASP146 0 0 0 0 0 0 2 0 4 9 0 0 0 0 0 0 (139) LYS148 0 0 0 0 0 0 8 7 2 0 0 0 0 0 0 0 (141) ARG150 0 0 0 2 9 5 0 0 0 0 0 0 0 0 0 0 chainB ( 50) LYS59 0 0 0 0 0 0 0 0 1 6 7 0 0 0 0 0 ( 51) THR60 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 54) THR63 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 ( 97) MET106 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 (135) ASN144 0 0 0 0 0 0 0 0 0 9 13 4 0 0 0 0 (136) ARG145 0 0 0 0 0 0 0 0 1 16 2 0 0 0 0 0 (137) ASP146 0 0 0 0 0 0 9 5 1 2 0 0 0 0 0 0 (139) LYS148 0 0 0 0 0 0 0 3 9 13 0 0 0 0 0 0 (141) ARG150 0 0 0 0 0 0 0 0 0 0 6 12 4 0 0 0 prot.sequence epdddlervratlysldpdgdrtagvlrdtldqlydgqrtgrwnfdqlhKTekThmgtlveinlhrefqfgdgfetdyeiagvqvdckfsmsqgawMlppesighiclviwasdqqcawtaglvkvipqflgtaNRDlKrRltpegraqvvklwpdhgklqenlllhipgdvrdqifsakssrgnqhgqarvnelfrrvhgrligraviatvaqqddfmkrvrgsggarsilrpegiiilghqdndpkvandlglpvprkgqvvaarvvpadegdqrqtaeiqgrrwavavpgdpiveapvvpr/epdddlervratlysldpdgdrtagvlrdtldqlydgqrtgrwnfdqlhKTekThmgtlveinlhrefqfgdgfetdyeiagvqvdckfsmsqgawMlppesighiclviwasdqqcawtaglvkvipqflgtaNRDlKrRltpegraqvvklwpdhgklqenlllhipgdvrdqifsakssrgnqhgqarvnelfrrvhgrligraviatvaqqddfmkrvrgsggarsilrpegiiilghqdndpkvandlglpvprkgqvvaarvvpadegdqrqtaeiqgrrwavavpgdpiveapvvpr >1iaw_B:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF NAEI COMPLEXED WITH 17MER DNA organism=LECHEVALIERIA AEROCOLONIGENES DNA sequence DG(F2):DC(E17) DC(F3):DG(E16) DC(F4):DG(E15) DA(F5):DT(E14) DC(F6):DG(E13) DG(F7):DC(E12) DC(F8):DG(E11) DC(F9):DG(E10) DG(F10):DC(E9) DG(F11):DC(E8) DC(F12):DG(E7) DG(F13):DC(E6) DT(F14):DA(E5) DG(F15):DC(E4) DG(F16):DC(E3) DC(F17):DG(E2) chainB ( 50) LYS59 0 0 0 0 0 7 6 1 0 0 0 0 0 0 0 0 ( 51) THR60 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 54) THR63 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 ( 97) MET106 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 (135) ASN144 0 0 0 0 4 13 9 0 0 0 0 0 0 0 0 0 (136) ARG145 0 0 0 0 0 2 16 1 0 0 0 0 0 0 0 0 (137) ASP146 0 0 0 0 0 0 2 1 5 9 0 0 0 0 0 0 (139) LYS148 0 0 0 0 0 0 13 9 3 0 0 0 0 0 0 0 (141) ARG150 0 0 0 4 12 6 0 0 0 0 0 0 0 0 0 0 prot.sequence epdddlervratlysldpdgdrtagvlrdtldqlydgqrtgrwnfdqlhKTekThmgtlveinlhrefqfgdgfetdyeiagvqvdckfsmsqgawMlppesighiclviwasdqqcawtaglvkvipqflgtaNRDlKrRltpegraqvvklwpdhgklqenlllhipgdvrdqifsakssrgnqhgqarvnelfrrvhgrligraviatvaqqddfmkrvrgsggarsilrpegiiilghqdndpkvandlglpvprkgqvvaarvvpadegdqrqtaeiqgrrwavavpgdpiveapvvpr >1ic8_AB:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=HEPATOCYTE NUCLEAR FACTOR 1A BOUND TO DNA : MODY3 GENE PRODUCT organism=Homo sapiens DNA sequence DC(F402):DG(E320) DT(F403):DA(E319) DG(F404):DC(E318) DG(F405):DC(E317) DT(F406):DA(E316) DG(F407):DC(E315) DA(F408):DT(E314) DA(F409):DT(E313) DT(F410):DA(E312) DT(F411):DA(E311) DA(F412):DT(E310) DT(F413):DA(E309) DT(F414):DA(E308) DA(F415):DT(E307) DA(F416):DT(E306) DC(F417):DG(E305) DC(F418):DG(E304) DA(F419):DT(E303) DA(F420):DT(E302) DG(F421):DC(E301) chainA ( 54) ASN140 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) GLN141 0 0 0 0 0 0 0 2 10 6 0 0 0 0 0 0 0 0 0 0 ( 56) SER142 0 0 0 0 0 3 7 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) HIS143 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) SER145 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 60) GLN146 0 0 0 0 0 4 5 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PRO153 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) TYR265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (160) ASN266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (164) ASN270 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 (167) LYS273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 10 0 0 chainB ( 56) ASN140 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 57) GLN141 0 0 0 0 0 0 0 0 0 10 8 2 0 0 0 0 0 0 0 0 ( 58) SER142 0 0 0 0 0 0 0 0 0 0 0 8 6 8 0 0 0 0 0 0 ( 59) HIS143 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 ( 61) SER145 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 62) GLN146 0 0 0 0 0 0 0 0 0 0 0 4 7 3 0 0 0 0 0 0 ( 68) THR152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 69) PRO153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 98) ARG203 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) TYR265 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) ASN266 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ALA269 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ASN270 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) LYS273 0 0 8 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kelenlspeeaahqkavvetllqedpwrvakmvksylqqhnipqrevvdttglNQSHlSQhlnkgtPmktqkraalytwyvrkqrevaqqftharnrfkwgpasqqilfqayerqknpskeeretlveecnraeciqrgvspsqaqglgsnlvtevrvYNwfaNrrKeea/ilkelenlspeeaahqkavvetllqedpwrvakmvksylqqhnipqrevvdttglNQSHlSQhlnkgTPmktqkraalytwyvrkqrevaqqfthrnRfkwgpasqqilfqayerqknpskeeretlveecnraeciqrgvspsqaqglgsnlvtevrvYNwfANrrKeeafr >1ic8_B:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=HEPATOCYTE NUCLEAR FACTOR 1A BOUND TO DNA : MODY3 GENE PRODUCT organism=Homo sapiens DNA sequence DC(F402):DG(E320) DT(F403):DA(E319) DG(F404):DC(E318) DG(F405):DC(E317) DT(F406):DA(E316) DG(F407):DC(E315) DA(F408):DT(E314) DA(F409):DT(E313) DT(F410):DA(E312) DT(F411):DA(E311) DA(F412):DT(E310) DT(F413):DA(E309) DT(F414):DA(E308) DA(F415):DT(E307) DA(F416):DT(E306) DC(F417):DG(E305) DC(F418):DG(E304) DA(F419):DT(E303) DA(F420):DT(E302) DG(F421):DC(E301) chainB ( 56) ASN140 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 57) GLN141 0 0 0 0 0 0 0 0 0 10 8 2 0 0 0 0 0 0 0 0 ( 58) SER142 0 0 0 0 0 0 0 0 0 0 0 8 6 8 0 0 0 0 0 0 ( 59) HIS143 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 ( 61) SER145 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 62) GLN146 0 0 0 0 0 0 0 0 0 0 0 4 7 3 0 0 0 0 0 0 ( 68) THR152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 69) PRO153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 98) ARG203 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) TYR265 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) ASN266 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ALA269 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ASN270 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) LYS273 0 0 8 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ilkelenlspeeaahqkavvetllqedpwrvakmvksylqqhnipqrevvdttglNQSHlSQhlnkgTPmktqkraalytwyvrkqrevaqqfthrnRfkwgpasqqilfqayerqknpskeeretlveecnraeciqrgvspsqaqglgsnlvtevrvYNwfANrrKeeafr >1id3_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE YEAST NUCLEOSOME CORE PARTICLE REVEALS FUNDAMENTAL DIFFERENCES IN INTER-NUCLEOSOME INTERACTIONS organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DT(I20):DT(J274) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DG(I125):DT(J169) DA(I126):DC(J168) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 28) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 15) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRykpgtvalreirrfqkstellirkLpfqrlvreiaqdfktdlRfqssaigalqesveaylvslfedtnlaaihakrvtiqkkeiklarrlrger/dniqgitkpairrlarrggvkRisgliyeevravlksflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfgg/qsrsakagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihqnllpkksakat/Rketyssyiykvlkqthpdtgisqksmsilnsfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkyssst/phRYkpgtvalreirrfqkstellirklpfqrlvreiaqdfktdlRfqssaigalqesveaylvslfedtnlaaihakrvtiqkkeiklarrlrger/hrkilrdniqgitkPairrlarrggvkrisgliyeevravlksflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfgg/kasqsrsakagltfPvgrvhrllrrgnyaqrigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihqnllpkk/vrketyssyiykvlKqthpdtgisqksmsilnsfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkyssstqa >1id3_E:Histone-fold; title=CRYSTAL STRUCTURE OF THE YEAST NUCLEOSOME CORE PARTICLE REVEALS FUNDAMENTAL DIFFERENCES IN INTER-NUCLEOSOME INTERACTIONS organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DC(J168):DA(I126) DT(J169):DG(I125) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DT(J274):DT(I20) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYkpgtvalreirrfqkstellirklpfqrlvreiaqdfktdlRfqssaigalqesveaylvslfedtnlaaihakrvtiqkkeiklarrlrger >1if1_AB:"Winged_helix"_DNA-binding_domain; title=INTERFERON REGULATORY FACTOR 1 (IRF-1) COMPLEX WITH DNA organism=Mus musculus DNA sequence DG(C200):DC(C225) DA(C201):DT(C224) DG(C202):DC(C223) DA(C203):DT(C222) DA(C204):DT(C221) DG(C205):DC(C220) DT(C206):DA(C219) DG(C207):DC(C218) DA(C208):DT(C217) DA(C209):DT(C216) DA(C210):DT(C215) DG(C211):DC(C214) DT(C212):DA(C213) DA(D513):DT(D512) DC(D514):DG(D511) DT(D515):DA(D510) DT(D516):DA(D509) DT(D517):DA(D508) DC(D518):DG(D507) DA(D519):DT(D506) DC(D520):DG(D505) DT(D521):DA(D504) DT(D522):DA(D503) DC(D523):DG(D502) DT(D524):DA(D501) DC(D525):DG(D500) chainA ( 74) ASN80 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG82 0 0 0 0 0 0 9 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) CYS83 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) SER87 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 33) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 73) ASN80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 75) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 10 0 0 0 0 0 0 ( 76) CYS83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 1 0 0 0 0 0 0 0 ( 79) ASN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 80) SER87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 prot.sequence rmrpwlemqinsnqipgliwinkeemifqipwkhaakhgwdinkdaclfrswaihtgrykagekepdpktwkaNfRCamnSlpdieevkdqsrnkgssavrvyrm/mrpwlemqinsnqipgliwinkeemifqipwkHaakhgwdinkdaclfrswaihtgrykagekepdpktwkaNfRCamNSlpdieevkdqsrnkgssavrvyrm >1if1_B:"Winged_helix"_DNA-binding_domain; title=INTERFERON REGULATORY FACTOR 1 (IRF-1) COMPLEX WITH DNA organism=Mus musculus DNA sequence DG(C200):DC(C225) DA(C201):DT(C224) DG(C202):DC(C223) DA(C203):DT(C222) DA(C204):DT(C221) DG(C205):DC(C220) DT(C206):DA(C219) DG(C207):DC(C218) DA(C208):DT(C217) DA(C209):DT(C216) DA(C210):DT(C215) DG(C211):DC(C214) DT(C212):DA(C213) DA(D513):DT(D512) DC(D514):DG(D511) DT(D515):DA(D510) DT(D516):DA(D509) DT(D517):DA(D508) DC(D518):DG(D507) DA(D519):DT(D506) DC(D520):DG(D505) DT(D521):DA(D504) DT(D522):DA(D503) DC(D523):DG(D502) DT(D524):DA(D501) DC(D525):DG(D500) chainB ( 33) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 73) ASN80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 75) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 10 0 0 0 0 0 0 ( 76) CYS83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 1 0 0 0 0 0 0 0 ( 79) ASN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 80) SER87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 prot.sequence mrpwlemqinsnqipgliwinkeemifqipwkHaakhgwdinkdaclfrswaihtgrykagekepdpktwkaNfRCamNSlpdieevkdqsrnkgssavrvyrm >1ig4_A:DNA-binding_domain; title=SOLUTION STRUCTURE OF THE METHYL-CPG-BINDING DOMAIN OF HUMAN MBD1 IN COMPLEX WITH METHYLATED DNA organism=HOMO SAPIENS DNA sequence DG(C113):DC(B112) DT(C114):DA(B111) DA(C115):DT(B110) DT(C116):DA(B109) DC(C117):DG(B108) 5CM(C118):DG(B107) DG(C119):5CM(B106) DG(C120):DC(B105) DA(C121):DT(B104) DT(C122):DA(B103) DA(C123):DT(B102) DC(C124):DG(B101) chainA ( 20) VAL20 0 0 0 0 0 0 1 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 7 14 0 0 0 0 0 ( 27) THR27 0 0 0 0 0 6 1 0 0 0 0 0 ( 32) ASP32 0 0 0 0 0 1 0 0 0 0 0 0 ( 34) TYR34 0 0 0 0 0 2 7 0 0 0 0 0 ( 44) ARG44 0 0 0 0 0 4 6 8 0 0 0 0 ( 45) SER45 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence maedwldcpalgpgwkrrevfRksgaTcgrsDtYyqsptgdriRskveltrylgpacdltlfdfkqgilcypapk >1ig7_A:Homeodomain-like; title=MSX-1 HOMEODOMAIN/DNA COMPLEX STRUCTURE organism=Mus musculus DNA sequence DC(B4):DG(C30) DA(B5):DT(C29) DC(B6):DG(C28) DT(B7):DA(C27) DA(B8):DT(C26) DA(B9):DT(C25) DT(B10):DA(C24) DT(B11):DA(C23) DG(B12):DC(C22) DA(B13):DT(C21) DA(B14):DT(C20) DG(B15):DC(C19) DG(B16):DC(C18) chainA ( 1) ARG102 0 0 0 0 5 6 0 0 0 0 0 0 0 ( 4) ARG105 0 0 12 9 6 0 0 0 0 0 0 0 0 ( 45) LYS146 0 0 0 0 0 0 0 0 0 2 1 0 0 ( 46) ILE147 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 49) GLN150 0 0 0 0 0 0 1 4 10 2 0 0 0 ( 50) ASN151 0 0 0 0 9 11 1 0 0 0 0 0 0 ( 57) ARG158 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence RkpRtpfttaqllalerkfrqkqylsiaeraefssslsltetqvKIwfQNrrakakRl >1ig9_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF THE REPLICATING COMPLEX OF A POL ALPHA FAMILY DNA POLYMERASE organism=Enterobacteria phage RB69 DNA sequence DA(T3):TTP(A1005) DG(T4):DOC(P115) DG(T5):DC(P114) DT(T6):DA(P113) DA(T7):DT(P112) DA(T8):DT(P111) DG(T9):DC(P110) DC(T10):DG(P109) DA(T11):DT(P108) DG(T12):DC(P107) DT(T13):DA(P106) DC(T14):DG(P105) DC(T15):DG(P104) DG(T16):DC(P103) DC(T17):DG(P102) chainA (361) PRO361 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ASP411 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) THR413 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) SER414 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) LEU415 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) ARG482 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) LYS486 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (560) LYS560 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (561) LEU561 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (564) ASN564 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (565) SER565 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (567) TYR567 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (623) ASP623 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 (800) LYS800 0 0 0 0 0 0 0 2 4 3 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkLlinSlYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygDTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >1ign_A:Homeodomain-like; title=DNA-BINDING DOMAIN OF RAP1 IN COMPLEX WITH TELOMERIC DNA SITE organism=Saccharomyces cerevisiae DNA sequence DC(C2):DG(D38) DG(C3):DC(D37) DC(C4):DG(D36) DA(C5):DT(D35) DC(C6):DG(D34) DA(C7):DT(D33) DC(C8):DG(D32) DC(C9):DG(D31) DC(C10):DG(D30) DA(C11):DT(D29) DC(C12):DG(D28) DA(C13):DT(D27) DC(C14):DG(D26) DA(C15):DT(D25) DC(C16):DG(D24) DC(C17):DG(D23) DA(C18):DT(D22) DG(C19):DC(D21) DC(F21):DG(E19) DT(F22):DA(E18) DG(F23):DC(E17) DG(F24):DC(E16) DT(F25):DA(E15) DG(F26):DC(E14) DT(F27):DA(E13) DG(F28):DC(E12) DT(F29):DA(E11) DG(F30):DC(E10) DG(F31):DC(E9) DG(F32):DC(E8) DT(F33):DA(E7) DG(F34):DC(E6) DT(F35):DA(E5) DG(F36):DC(E4) DC(F37):DG(E3) DG(F38):DC(E2) chainA ( 1) LYS360 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) HIS385 0 0 0 0 0 0 2 10 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ASN401 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER402 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG404 0 0 0 0 0 0 7 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) HIS405 0 0 0 2 15 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG408 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TYR410 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) LYS446 0 0 0 0 0 0 0 0 0 2 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ASN539 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ASP543 0 0 0 0 0 0 0 0 0 0 0 1 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) ARG546 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) LYS547 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR578 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) THR588 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) PRO589 0 0 0 0 0 0 0 0 2 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ASN591 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KasftdeedefildvvrknptrrttHtlydeishyvpnhtgNSiRHrfRvYlskrleyvyevdkfgklvrdddgnliktkvlppsiKrkfsadedytlaiavkkqfyrdlfqidpdtgrslirtqsrrgpiareffkhfaeehaahteNawRDrfRKfllaygiddyisyyeaeepmknlTpTPgNyns >1ign_AB:Homeodomain-like; title=DNA-BINDING DOMAIN OF RAP1 IN COMPLEX WITH TELOMERIC DNA SITE organism=Saccharomyces cerevisiae DNA sequence DC(E2):DG(F38) DG(E3):DC(F37) DC(E4):DG(F36) DA(E5):DT(F35) DC(E6):DG(F34) DA(E7):DT(F33) DC(E8):DG(F32) DC(E9):DG(F31) DC(E10):DG(F30) DA(E11):DT(F29) DC(E12):DG(F28) DA(E13):DT(F27) DC(E14):DG(F26) DA(E15):DT(F25) DC(E16):DG(F24) DC(E17):DG(F23) DA(E18):DT(F22) DG(E19):DC(F21) DC(D21):DG(C19) DT(D22):DA(C18) DG(D23):DC(C17) DG(D24):DC(C16) DT(D25):DA(C15) DG(D26):DC(C14) DT(D27):DA(C13) DG(D28):DC(C12) DT(D29):DA(C11) DG(D30):DC(C10) DG(D31):DC(C9) DG(D32):DC(C8) DT(D33):DA(C7) DG(D34):DC(C6) DT(D35):DA(C5) DG(D36):DC(C4) DC(D37):DG(C3) DG(D38):DC(C2) chainA ( 1) LYS360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 ( 26) HIS385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 10 2 0 0 0 0 0 0 ( 42) ASN401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 ( 43) SER402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 45) ARG404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 7 0 0 0 0 0 0 ( 46) HIS405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 15 2 0 0 0 ( 49) ARG408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 ( 51) TYR410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 87) LYS446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 2 0 0 0 0 0 0 0 0 0 (149) ASN539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ASP543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 1 0 0 0 0 0 0 0 0 0 0 0 (156) ARG546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) LYS547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (183) THR588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 (184) PRO589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 2 0 0 0 0 0 0 0 0 (186) ASN591 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 chainB ( 1) LYS360 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) HIS385 0 0 0 0 0 0 1 8 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ASN401 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER402 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG404 0 0 0 0 0 0 6 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) HIS405 0 0 0 2 17 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG408 0 0 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TYR410 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) LYS446 0 0 0 0 0 0 0 0 0 2 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ASN539 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ASP543 0 0 0 0 0 0 0 0 0 0 0 1 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) ARG546 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) LYS547 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR578 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) THR588 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) PRO589 0 0 0 0 0 0 0 0 2 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ASN591 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KasftdeedefildvvrknptrrttHtlydeishyvpnhtgNSiRHrfRvYlskrleyvyevdkfgklvrdddgnliktkvlppsiKrkfsadedytlaiavkkqfyrdlfqidpdtgrslirtqsrrgpiareffkhfaeehaahteNawRDrfRKfllaygiddyisyyeaeepmknlTpTPgNyns/KasftdeedefildvvrknptrrttHtlydeishyvpnhtgNSiRHrfRvYlskrleyvyevdkfgklvrdddgnliktkvlppsiKrkfsadedytlaiavkkqfyrdlfqidpdtgrslirtqsrrgpiareffkhfaeehaahteNawRDrfRKfllaygiddyisyyeaeepmknlTpTPgNyns >1ihf_A:IHF-like_DNA-binding_proteins; title=INTEGRATION HOST FACTOR/DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DG(D16):DC(C-16) DC(D17):DG(C-17) DC(D18):DG(C-18) DA(D19):DT(C-19) DA(D20):DT(C-20) DA(D21):DT(C-21) DA(D22):DT(C-22) DA(D23):DT(C-23) DA(D24):DT(C-24) DG(D25):DC(C-25) DC(D26):DG(C-26) DA(D27):DT(C-27) DT(D28):DA(C-28) DT(D29):DA(C-29) DG(E30):DC(C-30) DC(E31):DG(C-31) DT(E32):DA(C-32) DT(E33):DA(C-33) DA(E34):DT(C-34) DT(E35):DA(C-35) DC(E36):DG(C-36) DA(E37):DT(C-37) DA(E38):DT(C-38) DT(E39):DA(C-39) DT(E40):DA(C-40) DT(E41):DA(C-41) DG(E42):DC(C-42) DT(E43):DA(C-43) DT(E44):DA(C-44) DG(E45):DC(C-45) DC(E46):DG(C-46) DA(E47):DT(C-47) DC(E48):DG(C-48) DC(E49):DG(C-49) chainA ( 59) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 24 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 ( 72) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence altkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenaspk >1ihf_AB:IHF-like_DNA-binding_proteins; title=INTEGRATION HOST FACTOR/DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DG(C-49):DC(E49) DG(C-48):DC(E48) DT(C-47):DA(E47) DG(C-46):DC(E46) DC(C-45):DG(E45) DA(C-44):DT(E44) DA(C-43):DT(E43) DC(C-42):DG(E42) DA(C-41):DT(E41) DA(C-40):DT(E40) DA(C-39):DT(E39) DT(C-38):DA(E38) DT(C-37):DA(E37) DG(C-36):DC(E36) DA(C-35):DT(E35) DT(C-34):DA(E34) DA(C-33):DT(E33) DA(C-32):DT(E32) DG(C-31):DC(E31) DC(C-30):DG(E30) DA(C-29):DT(D29) DA(C-28):DT(D28) DT(C-27):DA(D27) DG(C-26):DC(D26) DC(C-25):DG(D25) DT(C-24):DA(D24) DT(C-23):DA(D23) DT(C-22):DA(D22) DT(C-21):DA(D21) DT(C-20):DA(D20) DT(C-19):DA(D19) DG(C-18):DC(D18) DG(C-17):DC(D17) DC(C-16):DG(D16) chainA ( 59) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN64 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 24 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS66 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 46) ARG46 0 0 0 0 5 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 17 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence altkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenaspk/mtkselierlatqqshipaktvedavkemlehmastlaqgerieiRgfgsfslhyrapRtgRNPKtgdkvelegkyvphfkpgkelrdraniyg >1ijw_C:Homeodomain-like; title=TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS. organism=? DNA sequence DG(A3):DC(B29) DT(A4):DA(B28) DT(A5):DA(B27) DT(A6):DA(B26) DT(A7):DA(B25) DT(A8):DA(B24) DG(A9):DC(B23) DA(A10):DT(B22) DT(A11):DA(B21) DA(A12):DT(B20) DA(A13):DT(B19) chainC ( 2) ARG140 0 0 5 17 5 2 0 0 0 0 0 ( 36) SER174 0 0 0 0 0 0 6 10 4 0 0 ( 37) THR175 0 0 0 0 0 0 2 0 0 0 0 ( 39) TYR177 0 0 0 0 0 0 0 0 0 5 6 ( 40) ARG178 0 0 0 0 0 11 9 0 0 0 0 prot.sequence gRprainkheqeqisrllekghprqqlaiifgigvSTlYRyfpassi >1imh_C:E_set_domains;p53-like_transcription_factors; title=TONEBP/DNA COMPLEX organism=Homo sapiens DNA sequence DC(B5003):DG(A4015) DT(B5004):DA(A4014) DA(B5005):DT(A4013) DT(B5006):DA(A4012) DT(B5007):DA(A4011) DT(B5008):DA(A4010) DT(B5009):DA(A4009) DT(B5010):DA(A4008) DC(B5011):DG(A4007) DC(B5012):DG(A4006) DA(B5013):DT(A4005) DG(B5014):DC(A4004) DC(B5015):DG(A4003) chainC ( 30) ARG217 0 0 0 0 0 0 0 4 10 4 0 0 0 ( 33) TYR220 0 0 0 0 0 0 7 5 0 0 0 0 0 ( 35) THR222 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 36) GLU223 0 0 0 0 0 0 0 6 4 0 0 0 0 ( 39) ARG226 0 0 0 0 0 0 0 0 2 10 10 0 0 (177) GLN364 0 0 0 0 0 0 1 11 3 0 0 0 0 prot.sequence kkspmlcgqypvksegkelkivvqpetqhRarYlTEgsRgsvkdrtqqgfptvkleghnepvvlqvfvgndsgrvkphgfyqacrvtgrnttpckevdiegttvievgldpsnnmtlavdcvgilklrnadvearigiagskkkstrarlvfrvnimrkdgstltlqtpsspilctQpagvpeilkkslhscsvkgeeevfligknflkgtkvifqenvsdenswkseaeidmelfhqnhlivkvppyhdqhitlpvsvgiyvvtnagrshdvqpftytpd >1imh_CD:E_set_domains;p53-like_transcription_factors; title=TONEBP/DNA COMPLEX organism=Homo sapiens DNA sequence DG(A4003):DC(B5015) DC(A4004):DG(B5014) DT(A4005):DA(B5013) DG(A4006):DC(B5012) DG(A4007):DC(B5011) DA(A4008):DT(B5010) DA(A4009):DT(B5009) DA(A4010):DT(B5008) DA(A4011):DT(B5007) DA(A4012):DT(B5006) DT(A4013):DA(B5005) DA(A4014):DT(B5004) DG(A4015):DC(B5003) chainC ( 30) ARG217 0 0 0 4 10 4 0 0 0 0 0 0 0 ( 33) TYR220 0 0 0 0 0 5 7 0 0 0 0 0 0 ( 35) THR222 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 36) GLU223 0 0 0 0 4 6 0 0 0 0 0 0 0 ( 39) ARG226 0 0 10 10 2 0 0 0 0 0 0 0 0 (177) GLN364 0 0 0 0 3 11 1 0 0 0 0 0 0 chainD ( 33) TYR220 0 0 0 0 0 0 0 0 0 3 2 0 0 ( 35) THR222 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 36) GLU223 0 0 0 0 0 0 0 0 0 0 1 1 5 prot.sequence kkspmlcgqypvksegkelkivvqpetqhRarYlTEgsRgsvkdrtqqgfptvkleghnepvvlqvfvgndsgrvkphgfyqacrvtgrnttpckevdiegttvievgldpsnnmtlavdcvgilklrnadvearigiagskkkstrarlvfrvnimrkdgstltlqtpsspilctQpagvpeilkkslhscsvkgeeevfligknflkgtkvifqenvsdenswkseaeidmelfhqnhlivkvppyhdqhitlpvsvgiyvvtnagrshdvqpftytpd/kkspmlcgqypvksegkelkivvqpetqhrarYlTEgsrgsvkdrtqqgfptvkleghnepvvlqvfvgndsgrvkphgfyqacrvtgrnttpckevdiegttvievgldpsnnmtlavdcvgilklrnadvearigiagskkkstrarlvfrvnimrkdgstltlqtpsspilctqpagvpeilkkslhscsvkgeeevfligknflkgtkvifqenvsdenswkseaeidmelfhqnhlivkvppyhdqhitlpvsvgiyvvtnagrshdvqpftytpd >1io4_A:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN-CBFBETA CORE DOMAIN HETERODIMER AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER organism=HOMO SAPIENS DNA sequence DC(F2):DG(E26) DG(F3):DC(E25) DC(F4):DG(E24) DA(F5):DT(E23) DA(F6):DT(E22) DC(F7):DG(E21) DC(F8):DG(E20) DA(F9):DT(E19) DC(F10):DG(E18) DA(F11):DT(E17) DG(F12):DC(E16) DA(F13):DT(E15) DG(F14):DC(E14) DT(F15):DA(E13) DT(F16):DA(E12) DT(F17):DA(E11) DG(F18):DC(E10) DG(F19):DC(E9) DA(F20):DT(E8) DA(F21):DT(E7) DA(F22):DT(E6) DT(F23):DA(E5) DC(F24):DG(E4) DT(F25):DA(E3) DT(F26):DA(E2) chainA ( 10) ARG278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 ( 13) ASN281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 2 0 0 0 ( 14) ASN282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 16) ALA284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 17) VAL285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 0 0 0 0 ( 20) SER288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 ( 21) ARG289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 2 0 0 0 0 0 0 prot.sequence khsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlf >1io4_ABC:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN-CBFBETA CORE DOMAIN HETERODIMER AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DA(E2):DT(F26) DA(E3):DT(F25) DG(E4):DC(F24) DA(E5):DT(F23) DT(E6):DA(F22) DT(E7):DA(F21) DT(E8):DA(F20) DC(E9):DG(F19) DC(E10):DG(F18) DA(E11):DT(F17) DA(E12):DT(F16) DA(E13):DT(F15) DC(E14):DG(F14) DT(E15):DA(F13) DC(E16):DG(F12) DT(E17):DA(F11) DG(E18):DC(F10) DT(E19):DA(F9) DG(E20):DC(F8) DG(E21):DC(F7) DT(E22):DA(F6) DT(E23):DA(F5) DG(E24):DC(F4) DC(E25):DG(F3) DG(E26):DC(F2) chainA ( 10) ARG278 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ASN281 0 0 0 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ASN282 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ALA284 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL285 0 0 0 0 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER288 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG289 0 0 0 0 0 0 2 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 14) ARG278 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ASN281 0 0 0 0 0 0 0 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ASN282 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ALA284 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) VAL285 0 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) SER288 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG289 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 21) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 ( 83) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 (111) VAL170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (112) ASP171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 0 0 0 (115) ARG174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 14 2 0 0 0 0 0 (118) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 14 8 0 0 0 0 prot.sequence khsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlf/ktvdkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql/gelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepRrh >1ipp_A:His-Me_finger_endonucleases; title=HOMING ENDONUCLEASE/DNA COMPLEX organism=Physarum polycephalum DNA sequence DT(D202):DA(C221) DG(D203):DC(C220) DA(D204):DT(C219) DC(D205):DG(C218) DT(D206):DA(C217) DC(D207):DG(C216) DT(D208):DA(C215) DC(D209):DG(C214) DT(D210):DA(C213) DT(D211):DA(C212) DA(D212):DT(C211) DA(D213):DT(C210) DG(D214):DC(C209) DA(D215):DT(C208) DG(D216):DC(C207) DA(D217):DT(C206) DG(D218):DC(C205) DT(D219):DA(C204) DC(D220):DG(C203) DA(D221):DT(C202) chainA ( 54) ALA55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 56) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 6 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 1 0 0 0 ( 64) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 8 ( 66) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 71) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 13 0 0 0 (115) LEU116 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 0 1 7 4 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >1ipp_AB:His-Me_finger_endonucleases; title=HOMING ENDONUCLEASE/DNA COMPLEX organism=Physarum polycephalum DNA sequence DT(D202):DA(C221) DG(D203):DC(C220) DA(D204):DT(C219) DC(D205):DG(C218) DT(D206):DA(C217) DC(D207):DG(C216) DT(D208):DA(C215) DC(D209):DG(C214) DT(D210):DA(C213) DT(D211):DA(C212) DA(D212):DT(C211) DA(D213):DT(C210) DG(D214):DC(C209) DA(D215):DT(C208) DG(D216):DC(C207) DA(D217):DT(C206) DG(D218):DC(C205) DT(D219):DA(C204) DC(D220):DG(C203) DA(D221):DT(C202) chainA ( 54) ALA55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 56) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 6 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 1 0 0 0 ( 64) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 8 ( 66) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 71) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 13 0 0 0 (115) LEU116 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 0 1 7 4 0 0 0 0 0 0 0 0 chainB ( 54) ALA55 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN57 0 0 0 0 6 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS65 8 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR67 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) LEU116 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv/altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvvhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >1iu3_CF: title=CRYSTAL STRUCTURE OF THE E.COLI SEQA PROTEIN COMPLEXED WITH HEMIMETHYLATED DNA organism=ESCHERICHIA COLI DNA sequence DA(A202):DT(B219) DG(A203):DC(B218) DG(A204):DC(B217) DA(A205):DT(B216) DT(A206):DA(B215) DC(A207):DG(B214) DC(A208):DG(B213) DA(A209):DT(B212) DA(A210):DT(B211) DT(E211):DA(D210) DT(E212):DA(D209) DG(E213):DC(D208) DG(E214):DC(D207) DA(E215):DT(D206) DT(E216):DA(D205) DC(E217):DG(D204) DC(E218):DG(D203) DT(E219):DA(D202) chainC ( 50) ARG51 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 ( 52) ARG53 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLN69 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN85 0 0 5 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ASN87 0 0 0 6 8 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG90 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainF ( 50) ARG51 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 52) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 68) GLN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 84) ASN85 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 1 0 0 ( 86) ASN87 0 0 0 0 0 0 0 0 0 0 0 0 1 8 2 0 0 0 ( 89) ARG90 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence plgsamrelllsdeyaeqkravnrfmlllstlysldaqafaeateslhgRtRvyfaadeqtllkngnQtkpkhvpgtpywvitNtNtgRkcsmiehimqsmqfpaeliekvcgti/plgsamrelllsdeyaeqkravnrfmlllstlysldaqafaeateslhgRtRvyfaadeqtllkngnQtkpkhvpgtpywvitNtNtgRkcsmiehimqsmqfpaeliekvcgti >1iu3_F:Replication_modulator_SeqA,_C-terminal_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE E.COLI SEQA PROTEIN COMPLEXED WITH HEMIMETHYLATED DNA organism=ESCHERICHIA COLI DNA sequence DA(A202):DT(B219) DG(A203):DC(B218) DG(A204):DC(B217) DA(A205):DT(B216) DT(A206):DA(B215) DC(A207):DG(B214) DC(A208):DG(B213) DA(A209):DT(B212) DA(A210):DT(B211) DT(E211):DA(D210) DT(E212):DA(D209) DG(E213):DC(D208) DG(E214):DC(D207) DA(E215):DT(D206) DT(E216):DA(D205) DC(E217):DG(D204) DC(E218):DG(D203) DT(E219):DA(D202) chainF ( 50) ARG51 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 52) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 68) GLN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 84) ASN85 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 1 0 0 ( 86) ASN87 0 0 0 0 0 0 0 0 0 0 0 0 1 8 2 0 0 0 ( 89) ARG90 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence plgsamrelllsdeyaeqkravnrfmlllstlysldaqafaeateslhgRtRvyfaadeqtllkngnQtkpkhvpgtpywvitNtNtgRkcsmiehimqsmqfpaeliekvcgti >1iv6_A:Homeodomain-like; title=SOLUTION STRUCTURE OF THE DNA COMPLEX OF HUMAN TRF1 organism=HOMO SAPIENS DNA sequence DC(C14):DG(B13) DC(C15):DG(B12) DC(C16):DG(B11) DT(C17):DA(B10) DA(C18):DT(B9) DA(C19):DT(B8) DC(C20):DG(B7) DC(C21):DG(B6) DC(C22):DG(B5) DT(C23):DA(B4) DA(C24):DT(B3) DA(C25):DT(B2) DC(C26):DG(B1) chainA ( 3) ARG380 0 0 0 8 7 11 0 0 0 0 0 0 0 ( 40) SER417 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 41) VAL418 0 0 0 0 0 0 0 3 1 0 2 0 0 ( 42) MET419 0 0 0 0 0 0 3 1 0 0 0 0 0 ( 44) LYS421 0 0 0 0 0 0 0 0 4 6 0 0 0 ( 45) ASP422 0 0 0 0 0 0 11 5 0 0 0 0 0 ( 48) ARG425 0 0 0 0 0 0 7 15 11 0 0 0 0 ( 49) THR426 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence rkRqawlweedknlrsgvrkygegnwskillhykfnnrtSVMlKDrwRTmkklklis >1j1v_A:TrpR-like; title=CRYSTAL STRUCTURE OF DNAA DOMAINIV COMPLEXED WITH DNAABOX DNA organism=ESCHERICHIA COLI DNA sequence DT(B101):DA(C213) DG(B102):DC(C212) DT(B103):DA(C211) DT(B104):DA(C210) DA(B105):DT(C209) DT(B106):DA(C208) DC(B107):DG(C207) DC(B108):DG(C206) DA(B109):DT(C205) DC(B110):DG(C204) DA(B111):DT(C203) DG(B112):DC(C202) DG(B113):DC(C201) chainA ( 26) ARG399 0 0 1 5 7 0 0 0 0 0 0 0 0 ( 49) LEU422 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 50) PRO423 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 60) ASP433 0 0 0 0 0 0 1 6 0 0 0 0 0 ( 61) HIS434 0 0 0 0 0 0 0 0 0 10 14 0 0 ( 62) THR435 0 0 0 0 0 0 5 6 5 1 0 0 0 ( 63) THR436 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 65) LEU438 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 66) HIS439 0 0 0 0 5 6 0 0 0 0 0 0 0 prot.sequence vtidniqktvaeyykikvadllskrRsrsvarprqmamalakeltnhsLPeigdafggrDHTTvLHacrkieqlreeshdikedfsnlirtlss >1j3e_A:Replication_modulator_SeqA,_C-terminal_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE E.COLI SEQA PROTEIN COMPLEXED WITH N6- METHYLADENINE- GUANINE MISMATCH DNA organism=ESCHERICHIA COLI DNA sequence DA(B201):DT(C220) DA(B202):DT(C219) DG(B203):DC(C218) DG(B204):DC(C217) 6MA(B205):DG(C216) DT(B206):DA(C215) DC(B207):DG(C214) DC(B208):DG(C213) DA(B209):DT(C212) DA(B210):DT(C211) chainA ( 50) ARG51 0 0 0 0 0 0 0 0 3 0 ( 52) ARG53 0 0 0 0 0 5 0 0 0 0 ( 70) LYS71 0 0 1 1 0 0 0 0 0 0 ( 84) ASN85 0 0 0 5 8 8 0 0 0 0 ( 86) ASN87 0 0 0 0 3 9 1 0 0 0 ( 89) ARG90 0 0 0 0 0 0 0 4 0 0 prot.sequence plgsamrelllsdeyaeqkravnrfmlllstlysldaqafaeateslhgRtRvyfaadeqtllkngnqtKpkhvpgtpywvitNtNtgRkcsmiehimqsmqfpaeliekvcgti >1j46_A:HMG-box; title=3D SOLUTION NMR STRUCTURE OF THE WILD TYPE HMG-BOX DOMAIN OF THE HUMAN MALE SEX DETERMINING FACTOR SRY COMPLEXED TO DNA organism=HOMO SAPIENS DNA sequence DC(B101):DG(C128) DC(B102):DG(C127) DT(B103):DA(C126) DG(B104):DC(C125) DC(B105):DG(C124) DA(B106):DT(C123) DC(B107):DG(C122) DA(B108):DT(C121) DA(B109):DT(C120) DA(B110):DT(C119) DC(B111):DG(C118) DA(B112):DT(C117) DC(B113):DG(C116) DC(B114):DG(C115) chainA ( 7) ARG7 0 0 0 0 1 10 3 0 0 0 0 0 0 0 ( 10) ASN10 0 0 0 0 0 0 6 1 0 0 0 0 0 0 ( 12) PHE12 0 0 0 0 0 0 0 5 4 0 0 0 0 0 ( 13) ILE13 0 0 0 0 0 0 0 9 8 0 0 0 0 0 ( 20) ARG20 0 0 0 0 0 0 0 0 3 10 0 0 0 0 ( 32) ASN32 0 0 0 0 0 0 0 0 0 7 15 0 0 0 ( 33) SER33 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 36) SER36 0 0 0 0 0 0 0 0 1 5 0 0 0 0 ( 74) TYR74 0 0 0 0 7 9 0 0 0 0 0 0 0 0 ( 76) PRO76 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence mqdrvkRpmNaFIvwsrdqRrkmalenprmrNSeiSkqlgyqwkmlteaekwpffqeaqklqamhrekypnykYrPrrkakmlpk >1j47_A:HMG-box; title=3D SOLUTION NMR STRUCTURE OF THE M9I MUTANT OF THE HMG-BOX DOMAIN OF THE HUMAN MALE SEX DETERMINING FACTOR SRY COMPLEXED TO DNA organism=HOMO SAPIENS DNA sequence DC(B101):DG(C128) DC(B102):DG(C127) DT(B103):DA(C126) DG(B104):DC(C125) DC(B105):DG(C124) DA(B106):DT(C123) DC(B107):DG(C122) DA(B108):DT(C121) DA(B109):DT(C120) DA(B110):DT(C119) DC(B111):DG(C118) DA(B112):DT(C117) DC(B113):DG(C116) DC(B114):DG(C115) chainA ( 7) ARG7 0 0 0 0 0 4 5 0 0 0 0 0 0 0 ( 10) ASN10 0 0 0 0 0 1 8 0 0 0 0 0 0 0 ( 12) PHE12 0 0 0 0 0 0 0 8 4 0 0 0 0 0 ( 13) ILE13 0 0 0 0 0 0 0 6 7 0 0 0 0 0 ( 20) ARG20 0 0 0 0 0 0 0 0 0 11 0 0 0 0 ( 32) ASN32 0 0 0 0 0 0 0 0 0 4 19 0 0 0 ( 33) SER33 0 0 0 0 0 0 0 0 0 1 7 0 0 0 ( 36) SER36 0 0 0 0 0 0 0 0 1 5 0 0 0 0 ( 74) TYR74 0 0 0 0 4 8 0 0 0 0 0 0 0 0 ( 76) PRO76 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 1 1 0 0 0 0 0 0 0 0 0 0 prot.sequence mqdrvkRpiNaFIvwsrdqRrkmalenprmrNSeiSkqlgyqwkmlteaekwpffqeaqklqamhrekypnykYrPrRkakmlpk >1j4w_A:Eukaryotic_type_KH-domain_KH-domain_type_I; title=COMPLEX OF THE KH3 AND KH4 DOMAINS OF FBP WITH A SINGLE_STRANDED 29MER DNA OLIGONUCLEOTIDE FROM THE FUSE ELEMENT OF THE C-MYC ONCOGENE organism=HOMO SAPIENS DNA sequence DT(B204) DA(B205) DT(B206) DT(B207) DC(B208) DC(B209) DC(B210) DT(B211) DA(B216) DT(B217) DT(B218) DT(B219) DT(B220) DT(B221) DT(B222) chainA ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 14) VAL14 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 18) ILE18 0 0 0 0 0 0 0 0 0 0 6 14 0 0 0 ( 37) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 48) ARG48 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 86) THR115 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) LEU117 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ILE119 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ILE126 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (107) ARG136 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 (109) GLU138 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (110) LEU139 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gshmidvpipRfaVgivIgrngemikkiqndagvriQFkpddgttpeRiaqitgppdraqhaaeiitdllrsvqqefnfivptgkTgLiIgkggetIksisqqsgaRiELqrnpppnadpnmklftirgtpqqidyarqlieeki >1j59_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'- CYCLIC-MONOPHOSPHATE organism=Escherichia coli DNA sequence DC(E26):DG(D26) DG(E25):DC(D25) DA(E24):DT(D24) DA(E23):DT(D23) DA(E22):DT(D22) DA(E21):DT(D21) DG(E20):DC(D20) DT(E19):DA(D19) DG(E18):DC(D18) DT(E17):DA(D17) DG(E16):DC(D16) DA(E15):DT(D15) DC(E14):DG(D14) DA(F13):DT(D13) DT(F12):DA(D12) DA(F11):DT(D11) DT(F10):DA(D10) DG(F9):DC(C9) DT(F8):DA(C8) DC(F7):DG(C7) DA(F6):DT(C6) DC(F5):DG(C5) DA(F4):DT(C4) DC(F3):DG(C3) DT(F2):DA(C2) DT(F1):DA(C1) DT(F-1):DA(C-1) DT(F-2):DA(C-2) DC(F-3):DG(C-3) DG(F-4):DC(C-4) chainA (162) GLN170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (171) SER179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (172) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 14 0 0 0 0 0 0 0 (173) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 8 1 0 0 0 0 0 0 0 0 (177) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 6 0 0 0 0 0 0 0 0 0 prot.sequence ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcSREtvgRilkmledqnlisahgktivvyg >1j5n_A:HMG-box; title=SOLUTION STRUCTURE OF THE NON-SEQUENCE-SPECIFIC HMGB PROTEIN NHP6A IN COMPLEX WITH SRY DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(B101):DC(C130) DG(B102):DC(C129) DG(B103):DC(C128) DG(B104):DC(C127) DT(B105):DA(C126) DG(B106):DC(C125) DA(B107):DT(C124) DT(B108):DA(C123) DT(B109):DA(C122) DG(B110):DC(C121) DT(B111):DA(C120) DT(B112):DA(C119) DC(B113):DG(C118) DA(B114):DT(C117) DG(B115):DC(C116) chainA ( 3) THR3 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 0 7 4 2 2 0 0 0 ( 11) THR11 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 ( 13) ARG13 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 23) ARG23 0 0 0 0 0 8 20 9 0 0 0 0 0 0 0 ( 26) SER26 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 ( 28) TYR28 0 0 0 0 0 0 0 0 12 22 0 0 0 0 0 ( 29) MET29 0 0 0 0 0 0 0 0 12 18 0 0 0 0 0 ( 48) PHE48 0 0 0 0 0 0 0 0 0 0 11 22 0 0 0 prot.sequence mvTprepkkRTtRkkkdpnapkRalSaYMffanenrdivrsenpditFgqvgkklgekwkaltpeekqpyeakaqadkkryesekelynatla >1j5o_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF MET184ILE MUTANT OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DOUBLE STRANDED DNA TEMPLATE-PRIMER organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(T802):DA(P838) DG(T803):DC(P837) DG(T804):DC(P836) DC(T805):DG(P835) DG(T806):DC(P834) DC(T807):DG(P833) DC(T808):DG(P832) DC(T809):DG(P831) DG(T810):DC(P830) DA(T811):DT(P829) DA(T812):DT(P828) DC(T813):DG(P827) DA(T814):DT(P826) DG(T815):DC(P825) DG(T816):DC(P824) DG(T817):DC(P823) DA(T818):DT(P822) DC(T819):DG(P821) chainA ( 94) ILE94 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ILE184 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (266) TRP266 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYIddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNWasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk/pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYIddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNWasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqle >1jb7_B:Nucleic_acid-binding_proteins; title=DNA G-QUARTETS IN A 1.86 A RESOLUTION STRUCTURE OF AN OXYTRICHA NOVA TELOMERIC PROTEIN-DNA COMPLEX organism=STERKIELLA NOVA DNA sequence DG(D11) DG(D10) DG(D9) DT(D8) DT(D7) DT(D6) DT(D5) DG(D4) DG(D3) DG(D1) DG(D2):DG(D3) chainB ( 36) LYS44 0 0 0 0 0 1 0 0 0 0 0 ( 37) GLU45 0 0 13 0 0 4 0 0 0 0 0 ( 40) PRO48 0 0 1 0 0 0 0 0 0 0 0 ( 41) HIS49 0 0 15 0 0 0 0 0 0 0 0 ( 43) LEU51 0 0 3 0 0 0 0 0 0 0 0 ( 50) PHE58 0 0 1 0 0 0 0 0 0 0 0 ( 98) PHE106 0 0 10 0 0 0 0 0 0 0 0 (101) TYR109 0 5 0 0 0 0 0 0 0 0 0 (126) TYR134 0 0 0 0 0 0 1 51 0 0 0 (132) ARG140 0 37 0 0 0 0 0 0 0 0 0 (137) LYS145 0 6 0 0 0 0 0 0 0 0 0 prot.sequence qqqsafkqlytelfnnegdfskvssnlkkplkcyvKEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >1je8_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=TWO-COMPONENT RESPONSE REGULATOR NARL/DNA COMPLEX: DNA BENDING FOUND IN A HIGH AFFINITY SITE organism=Escherichia coli DNA sequence DC(C1):DG(D40) DG(C2):DC(D39) DT(C3):DA(D38) DA(C4):DT(D37) DC(C5):DG(D36) DC(C6):DG(D35) DC(C7):DG(D34) DA(C8):DT(D33) DT(C9):DA(D32) DT(C10):DA(D31) DA(C11):DT(D30) DA(C12):DT(D29) DT(C13):DA(D28) DG(C14):DC(D27) DG(C15):DC(D26) DG(C16):DC(D25) DT(C17):DA(D24) DA(C18):DT(D23) DC(C19):DG(D22) DG(C20):DC(D21) chainA ( 35) SER185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 36) THR186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 ( 38) LYS188 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 ( 39) VAL189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 3 0 0 ( 40) HIS190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 42) LYS192 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 5 0 0 0 0 chainB ( 35) SER185 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR186 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS188 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 39) VAL189 0 0 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS190 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) LYS192 0 0 0 0 4 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif/rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif >1je8_EF:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=TWO-COMPONENT RESPONSE REGULATOR NARL/DNA COMPLEX: DNA BENDING FOUND IN A HIGH AFFINITY SITE organism=Escherichia coli DNA sequence DC(G1):DG(H40) DG(G2):DC(H39) DT(G3):DA(H38) DA(G4):DT(H37) DC(G5):DG(H36) DC(G6):DG(H35) DC(G7):DG(H34) DA(G8):DT(H33) DT(G9):DA(H32) DT(G10):DA(H31) DA(G11):DT(H30) DA(G12):DT(H29) DT(G13):DA(H28) DG(G14):DC(H27) DG(G15):DC(H26) DG(G16):DC(H25) DT(G17):DA(H24) DA(G18):DT(H23) DC(G19):DG(H22) DG(G20):DC(H21) chainE ( 36) SER185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 37) THR186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 ( 39) LYS188 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 ( 40) VAL189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 3 0 0 ( 41) HIS190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 43) LYS192 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 6 0 0 0 0 chainF ( 35) SER185 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR186 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS188 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 39) VAL189 0 0 3 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS190 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) LYS192 0 0 0 0 6 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence erdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif/rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif >1je8_F:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=TWO-COMPONENT RESPONSE REGULATOR NARL/DNA COMPLEX: DNA BENDING FOUND IN A HIGH AFFINITY SITE organism=Escherichia coli DNA sequence DC(H21):DG(G20) DG(H22):DC(G19) DT(H23):DA(G18) DA(H24):DT(G17) DC(H25):DG(G16) DC(H26):DG(G15) DC(H27):DG(G14) DA(H28):DT(G13) DT(H29):DA(G12) DT(H30):DA(G11) DA(H31):DT(G10) DA(H32):DT(G9) DT(H33):DA(G8) DG(H34):DC(G7) DG(H35):DC(G6) DG(H36):DC(G5) DT(H37):DA(G4) DA(H38):DT(G3) DC(H39):DG(G2) DG(H40):DC(G1) chainF ( 35) SER185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 36) THR186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 ( 38) LYS188 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 ( 39) VAL189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 3 0 0 ( 40) HIS190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 42) LYS192 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 6 0 0 0 0 prot.sequence rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif >1jey_AB:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=CRYSTAL STRUCTURE OF THE KU HETERODIMER BOUND TO DNA organism=HOMO SAPIENS DNA sequence DG(C1):DC(D34) DT(C2):DA(D33) DT(C3):DA(D32) DT(C4):DA(D31) DT(C5):DA(D30) DT(C6):DA(D29) DA(C7):DT(D28) DG(C8):DC(D27) DT(C9):DA(D26) DT(C10):DA(D25) DT(C11):DA(D24) DA(C12):DT(D23) DT(C13):DA(D22) DT(C14):DA(D21) DG(C15):DT(D20) DG(C16):DC(D19) DG(C17):DG(D18) DC(C18):DA(D17) chainA chainB (385) ARG400 0 0 0 0 0 0 0 0 0 3 10 2 5 0 0 0 0 0 prot.sequence grdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisvhfeesskledllrkvraketrkralsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkk >1jfi_ABC:TATA-box_binding_protein-like;Histone-fold; title=CRYSTAL STRUCTURE OF THE NC2-TBP-DNA TERNARY COMPLEX organism=HOMO SAPIENS DNA sequence DT(D602):DA(E718) DG(D603):DC(E717) DG(D604):DC(E716) DC(D605):DG(E715) DT(D606):DA(E714) DA(D607):DT(E713) DT(D608):DA(E712) DA(D609):DT(E711) DA(D610):DT(E710) DA(D611):DT(E709) DA(D612):DT(E708) DG(D613):DC(E707) DG(D614):DC(E706) DG(D615):DC(E705) DC(D616):DG(E704) DT(D617):DA(E703) DC(D618):DG(E702) chainA ( 20) LYS29 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 chainB ( 94) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 chainC ( 12) ASN367 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 ( 14) VAL369 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 ( 42) PHE397 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 ( 57) LEU412 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 59) PHE414 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 ( 65) VAL420 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 ( 67) THR422 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (102) ASN457 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 (104) VAL459 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 (133) PHE488 0 0 0 0 8 14 0 0 0 0 0 0 0 0 0 0 0 (134) PRO489 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 (148) LEU503 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 (150) PHE505 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (156) VAL511 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 (158) THR513 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 prot.sequence arfpparikkimqtdeeigKvaaavpviisralelflesllkkacqvtqsrtmttshlkqcie/ddltipraainkmiketlpnvrvandarelvvncctefihlisseaneicnksekktispehviqaleslgfgsyisevkevlqecktvalkrRkassrlenlgipeeellrqqqelfakarqqqaelaqqewlq/shmsgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrkt >1jfi_B:Histone-fold; title=CRYSTAL STRUCTURE OF THE NC2-TBP-DNA TERNARY COMPLEX organism=HOMO SAPIENS DNA sequence DT(D602):DA(E718) DG(D603):DC(E717) DG(D604):DC(E716) DC(D605):DG(E715) DT(D606):DA(E714) DA(D607):DT(E713) DT(D608):DA(E712) DA(D609):DT(E711) DA(D610):DT(E710) DA(D611):DT(E709) DA(D612):DT(E708) DG(D613):DC(E707) DG(D614):DC(E706) DG(D615):DC(E705) DC(D616):DG(E704) DT(D617):DA(E703) DC(D618):DG(E702) chainB ( 94) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 prot.sequence ddltipraainkmiketlpnvrvandarelvvncctefihlisseaneicnksekktispehviqaleslgfgsyisevkevlqecktvalkrRkassrlenlgipeeellrqqqelfakarqqqaelaqqewlq >1jfs_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=PURINE REPRESSOR MUTANT-HYPOXANTHINE-PURF OPERATOR COMPLEX organism=Escherichia coli DNA sequence DT(B699) DA(B700) DC(B701) DG(B702) DC(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DG(B712) DC(B713) DG(B714) DT(B715) chainA ( 13) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) THR16 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG26 0 0 21 11 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) LEU54 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 ( 54) LYS55 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 prot.sequence atikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdfgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1jft_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=PURINE REPRESSOR MUTANT-HYPOXANTHINE-PURF OPERATOR COMPLEX organism=Escherichia coli DNA sequence DT(B699) DA(B700) DC(B701) DG(B702) DC(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DG(B712) DC(B713) DG(B714) DT(B715) chainA ( 13) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) THR16 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG26 0 0 21 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) LEU54 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 ( 54) LYS55 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 prot.sequence atikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdageakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyrr >1jgg_AB:Homeodomain-like; title=EVEN-SKIPPED HOMEODOMAIN COMPLEXED TO AT-RICH DNA organism=Drosophila melanogaster DNA sequence DA(D211):DT(C210) DA(D212):DT(C209) DT(D213):DA(C208) DT(D214):DA(C207) DC(D215):DG(C206) DA(D216):DT(C205) DA(D217):DT(C204) DT(D218):DA(C203) DT(D219):DA(C202) DA(D220):DT(C201) chainA ( 1) ARG103 0 0 10 13 0 0 0 0 0 0 ( 2) TYR104 0 0 0 13 4 0 0 0 0 0 ( 3) ARG105 0 0 0 0 3 6 0 0 0 0 ( 45) VAL147 0 2 2 0 0 0 0 0 0 0 ( 49) ASN151 0 2 12 7 0 0 0 0 0 0 ( 52) MET154 7 8 1 0 0 0 0 0 0 0 ( 56) ARG158 0 0 2 0 0 0 0 0 0 0 chainB ( 1) ARG303 0 0 0 0 0 0 1 8 10 0 ( 2) TYR304 0 0 0 0 0 0 0 0 15 3 ( 3) ARG305 0 0 0 0 0 0 0 0 0 5 ( 45) VAL347 0 0 0 0 0 0 3 2 0 0 ( 48) GLN350 0 0 0 0 0 3 8 0 0 0 ( 49) ASN351 0 0 0 0 0 0 2 11 6 0 ( 52) MET354 0 0 0 0 0 0 6 4 0 0 ( 53) LYS355 0 0 0 0 0 0 0 0 0 2 ( 56) ARG358 0 0 0 0 0 0 1 3 0 0 prot.sequence RYRtaftrdqlgrlekefykenyvsrprrcelaaqlnlpestikVwfQNrrMkdkRq/RYRtaftrdqlgrlekefykenyvsrprrcelaaqlnlpestikVwfQNrrMKdkRq >1jgg_B:Homeodomain-like; title=EVEN-SKIPPED HOMEODOMAIN COMPLEXED TO AT-RICH DNA organism=Drosophila melanogaster DNA sequence DT(C201):DA(D220) DA(C202):DT(D219) DA(C203):DT(D218) DT(C204):DA(D217) DT(C205):DA(D216) DG(C206):DC(D215) DA(C207):DT(D214) DA(C208):DT(D213) DT(C209):DA(D212) DT(C210):DA(D211) chainB ( 1) ARG303 0 10 8 1 0 0 0 0 0 0 ( 2) TYR304 3 15 0 0 0 0 0 0 0 0 ( 3) ARG305 5 0 0 0 0 0 0 0 0 0 ( 45) VAL347 0 0 2 3 0 0 0 0 0 0 ( 48) GLN350 0 0 0 8 3 0 0 0 0 0 ( 49) ASN351 0 6 11 2 0 0 0 0 0 0 ( 52) MET354 0 0 4 6 0 0 0 0 0 0 ( 53) LYS355 2 0 0 0 0 0 0 0 0 0 ( 56) ARG358 0 0 3 1 0 0 0 0 0 0 prot.sequence RYRtaftrdqlgrlekefykenyvsrprrcelaaqlnlpestikVwfQNrrMKdkRq >1jh9_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=PURINE REPRESSOR MUTANT-HYPOXANTHINE-PURF OPERATOR COMPLEX organism=Escherichia coli DNA sequence DA(B699) DA(B700) DC(B701) DG(B702) DA(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DT(B712) DC(B713) DG(B714) DT(B715) chainA ( 13) SER14 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR15 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 15) THR16 0 0 0 6 6 3 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG26 0 0 23 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) LEU54 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 ( 54) LYS55 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 prot.sequence atikdvakranvSTTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdrgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1jj4_AB:Viral_DNA-binding_domain; title=HUMAN PAPILLOMAVIRUS TYPE 18 E2 DNA-BINDING DOMAIN BOUND TO ITS DNA TARGET organism=Human papillomavirus type 18 DNA sequence DC(C602):DG(D917) DA(C603):DT(D916) DA(C604):DT(D915) DC(C605):DG(D914) DC(C606):DG(D913) DG(C607):DC(D912) DA(C608):DT(D911) DA(C609):DT(D910) DT(C610):DA(D909) DT(C611):DA(D908) DC(C612):DG(D907) DG(C613):DC(D906) DG(C614):DC(D905) DT(C615):DA(D904) DT(C616):DA(D903) DG(C617):DC(D902) chainA ( 12) ASN297 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 ( 15) LYS300 0 0 0 0 0 0 0 0 0 0 5 16 7 0 0 0 ( 16) CYS301 0 0 0 0 0 0 0 0 0 0 0 0 2 1 4 0 ( 19) TYR304 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 ( 20) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 chainB ( 13) ASN297 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LYS300 0 0 0 7 16 6 0 0 0 0 0 0 0 0 0 0 ( 17) CYS301 0 4 4 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) TYR304 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG305 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mtpiihlkgdrNslKClrYRlrkhsdhyrdisstwhwtktgiltvtyhsetqrtkflntvaipdsvqilvgymt/hmtpiihlkgdrNslKClrYRlrkhsdhyrdisstwhwtektgiltvtyhsetqrtkflntvaipdsvqilvgymt >1jj4_B:Viral_DNA-binding_domain; title=HUMAN PAPILLOMAVIRUS TYPE 18 E2 DNA-BINDING DOMAIN BOUND TO ITS DNA TARGET organism=Human papillomavirus type 18 DNA sequence DC(C602):DG(D917) DA(C603):DT(D916) DA(C604):DT(D915) DC(C605):DG(D914) DC(C606):DG(D913) DG(C607):DC(D912) DA(C608):DT(D911) DA(C609):DT(D910) DT(C610):DA(D909) DT(C611):DA(D908) DC(C612):DG(D907) DG(C613):DC(D906) DG(C614):DC(D905) DT(C615):DA(D904) DT(C616):DA(D903) DG(C617):DC(D902) chainB ( 13) ASN297 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LYS300 0 0 0 7 16 6 0 0 0 0 0 0 0 0 0 0 ( 17) CYS301 0 4 4 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) TYR304 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG305 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmtpiihlkgdrNslKClrYRlrkhsdhyrdisstwhwtektgiltvtyhsetqrtkflntvaipdsvqilvgymt >1jj6_C:Homeodomain-like; title=TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS. organism=? DNA sequence DC(B18):DG(A14) DT(B19):DA(A13) DT(B20):DA(A12) DA(B21):DT(A11) DT(B22):DA(A10) DC(B23):DG(A9) DA(B24):DT(A8) DA(B25):DT(A7) DA(B26):DT(A6) DA(B27):5IU(A5) DA(B28):DT(A4) DC(B29):DG(A3) chainC ( 2) ARG140 0 0 0 0 0 0 1 4 14 4 0 0 ( 36) SER174 0 0 0 4 9 5 0 0 0 0 0 0 ( 37) THR175 0 0 0 0 0 2 0 0 0 0 0 0 ( 39) TYR177 0 5 5 0 0 0 0 0 0 0 0 0 ( 40) ARG178 0 0 0 0 0 9 11 0 0 0 0 0 prot.sequence gRprainkheqeqisrllekghprqqlaiifgigvSTlYRyfpassi >1jj8_C:Homeodomain-like; title=TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS organism=? DNA sequence DG(A3):DC(B29) 5IU(A4):DA(B28) DT(A5):DA(B27) DT(A6):DA(B26) DT(A7):DA(B25) DT(A8):DA(B24) DG(A9):DC(B23) DA(A10):DT(B22) DT(A11):DA(B21) DA(A12):DT(B20) DA(A13):DT(B19) DG(A14):DC(B18) chainC ( 2) ARG140 0 0 4 14 6 1 0 0 0 0 0 0 ( 36) SER174 0 0 0 0 0 0 6 10 4 0 0 0 ( 37) THR175 0 0 0 0 0 0 4 0 0 0 0 0 ( 39) TYR177 0 0 0 0 0 0 0 0 0 7 10 0 ( 40) ARG178 0 0 0 0 0 9 8 0 0 0 0 0 prot.sequence gRprainkheqeqisrllekghprqqlaiifgigvSTlYRyfpassikk >1jk1_A:beta-beta-alpha_zinc_fingers; title=ZIF268 D20A MUTANT BOUND TO WT DNA SITE organism=MUS MUSCULUS DNA sequence DC(C52):DG(B11) DC(C53):DG(B10) DG(C54):DC(B9) DC(C55):DG(B8) DC(C56):DG(B7) DC(C57):DG(B6) DA(C58):DT(B5) DC(C59):DG(B4) DG(C60):DC(B3) DC(C61):DG(B2) chainA ( 16) ARG118 7 12 5 0 0 0 0 0 0 0 ( 18) ALA120 2 0 0 0 0 0 0 0 0 0 ( 19) GLU121 0 0 12 0 0 0 0 0 0 0 ( 22) ARG124 0 0 4 11 8 0 0 0 0 0 ( 44) ARG146 0 0 0 3 13 13 0 0 0 0 ( 46) ASP148 0 0 4 6 1 0 0 0 0 0 ( 47) HIS149 0 0 0 0 0 11 27 0 0 0 ( 50) THR152 0 0 0 0 0 0 1 0 0 0 ( 72) ARG174 0 0 0 0 0 0 11 12 14 0 ( 74) ASP176 0 0 0 0 0 1 7 2 0 0 ( 75) GLU177 0 0 0 0 0 0 0 0 5 1 ( 78) ARG180 0 0 0 0 0 0 0 0 5 11 prot.sequence rpyacpvescdrrfsRsAEltRhirihtgqkpfqcricmrnfsRsDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlr >1jk2_A:beta-beta-alpha_zinc_fingers; title=ZIF268 D20A MUTANT BOUND TO THE GCT DNA SITE organism=MUS MUSCULUS DNA sequence DG(B2):DC(C61) DC(B3):DG(C60) DG(B4):DC(C59) DT(B5):DA(C58) DG(B6):DC(C57) DG(B7):DC(C56) DG(B8):DC(C55) DC(B9):DG(C54) DT(B10):DA(C53) DG(B11):DC(C52) chainA ( 16) ARG118 0 0 0 0 0 0 0 6 3 0 ( 18) ALA120 0 0 0 0 0 0 0 0 0 1 ( 19) GLU121 0 0 0 0 0 0 2 10 0 0 ( 22) ARG124 0 0 0 0 0 10 10 4 0 0 ( 44) ARG146 0 0 0 0 13 13 3 0 0 0 ( 46) ASP148 0 0 0 0 0 1 6 3 0 0 ( 47) HIS149 0 0 0 27 12 0 0 0 0 0 ( 50) THR152 0 0 0 1 0 0 0 0 0 0 ( 72) ARG174 0 16 14 11 0 0 0 0 0 0 ( 74) ASP176 0 0 1 5 1 0 0 0 0 0 ( 75) GLU177 1 5 0 0 0 0 0 0 0 0 ( 78) ARG180 11 5 0 0 0 0 0 0 0 0 prot.sequence rpyacpvescdrrfsRsAEltRhirihtgqkpfqcricmrnfsRsDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlr >1jko_C:Homeodomain-like; title=TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS organism=? DNA sequence DG(A3):DC(B29) DT(A4):DA(B28) DT(A5):DA(B27) DT(A6):DA(B26) DT(A7):DA(B25) DT(A8):DA(B24) DG(A9):DC(B23) DG(A10):DC(B22) DT(A11):DA(B21) DA(A12):DT(B20) DA(A13):DT(B19) DG(A14):DC(B18) chainC ( 2) ARG140 0 0 3 15 6 3 0 0 0 0 0 0 ( 36) SER174 0 0 0 0 0 0 7 9 6 0 0 0 ( 37) THR175 0 0 0 0 0 0 2 0 0 0 0 0 ( 39) TYR177 0 0 0 0 0 0 0 0 0 5 3 0 ( 40) ARG178 0 0 0 0 0 8 7 0 0 0 0 0 prot.sequence gRprainkheqeqisrllekghprqqlaiifgigvSTlYRyfpass >1jkp_C:Homeodomain-like; title=TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS organism=? DNA sequence DG(A3):DC(B29) DT(A4):DA(B28) DT(A5):DA(B27) DT(A6):DA(B26) DT(A7):DA(B25) DT(A8):DA(B24) DG(A9):DC(B23) DA(A10):DT(B22) DG(A11):DC(B21) DA(A12):DT(B20) DA(A13):DT(B19) DG(A14):DC(B18) chainC ( 2) ARG140 0 0 4 15 3 1 0 0 0 0 0 0 ( 36) SER174 0 0 0 0 0 0 3 9 3 0 0 0 ( 37) THR175 0 0 0 0 0 0 2 0 0 0 0 0 ( 39) TYR177 0 0 0 0 0 0 0 0 0 5 3 0 ( 40) ARG178 0 0 0 0 0 9 6 0 0 0 0 0 prot.sequence gRprainkheqeqisrllekghprqqlaiifgigvSTlYRyfpassi >1jkq_C:Homeodomain-like; title=TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS organism=? DNA sequence DG(A3):DC(B29) DT(A4):DA(B28) DT(A5):DA(B27) DT(A6):DA(B26) DT(A7):DA(B25) DT(A8):DA(B24) DT(A9):DA(B23) DA(A10):DT(B22) DT(A11):DA(B21) DA(A12):DT(B20) DA(A13):DT(B19) DG(A14):DC(B18) chainC ( 1) ARG140 0 0 1 12 7 1 0 0 0 0 0 0 ( 35) SER174 0 0 0 0 0 0 2 7 4 0 0 0 ( 36) THR175 0 0 0 0 0 0 3 0 0 0 0 0 ( 38) TYR177 0 0 0 0 0 0 0 0 0 5 3 0 ( 39) ARG178 0 0 0 0 0 2 3 0 0 0 0 0 prot.sequence RprainkheqeqisrllekghprqqlaiifgigvSTlYRyfpassi >1jkr_C:Homeodomain-like; title=TESTING THE WATER-MEDIATED HIN RECOMBINASE DNA RECOGNITION BY SYSTEMATIC MUTATIONS organism=? DNA sequence DG(A3):DC(B29) DT(A4):DA(B28) DT(A5):DA(B27) DT(A6):DA(B26) DT(A7):DA(B25) DT(A8):DA(B24) DG(A9):DC(B23) DA(A10):DT(B22) DC(A11):DG(B21) DA(A12):DT(B20) DA(A13):DT(B19) DG(A14):DC(B18) chainC ( 2) ARG140 0 0 5 14 5 1 0 0 0 0 0 0 ( 36) SER174 0 0 0 0 0 0 5 9 3 0 0 0 ( 37) THR175 0 0 0 0 0 0 2 0 0 0 0 0 ( 39) TYR177 0 0 0 0 0 0 0 0 0 5 2 0 ( 40) ARG178 0 0 0 0 0 10 7 0 0 0 0 0 prot.sequence gRprainkheqeqisrllekghprqqlaiifgigvSTlYRyfpass >1jnm_A:A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=CRYSTAL STRUCTURE OF THE JUN/CRE COMPLEX organism=Homo sapiens DNA sequence DC(D301):DG(C220) DG(D302):DC(C219) DT(D303):DA(C218) DC(D304):DG(C217) DG(D305):DC(C216) DA(D306):DT(C215) DT(D307):DA(C214) DG(D308):DC(C213) DA(D309):DT(C212) DC(D310):DG(C211) DG(D311):DC(C210) DT(D312):DA(C209) DC(D313):DG(C208) DA(D314):DT(C207) DT(D315):DA(C206) DC(D316):DG(C205) DG(D317):DC(C204) DA(D318):DT(C203) DC(D319):DG(C202) DG(D320):DC(C201) chainA ( 9) ASN262 0 0 0 0 0 2 8 6 5 0 0 0 0 0 0 0 0 0 0 0 ( 12) ALA265 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ALA266 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 16) SER269 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG270 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 prot.sequence kaerKrmrNriAAskSRkrkleriarleekvktlkaqnselastanmlreqvaqlk >1jnm_AB:Leucine_zipper_domain;A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=CRYSTAL STRUCTURE OF THE JUN/CRE COMPLEX organism=Homo sapiens DNA sequence DC(C201):DG(D320) DG(C202):DC(D319) DT(C203):DA(D318) DC(C204):DG(D317) DG(C205):DC(D316) DA(C206):DT(D315) DT(C207):DA(D314) DG(C208):DC(D313) DA(C209):DT(D312) DC(C210):DG(D311) DG(C211):DC(D310) DT(C212):DA(D309) DC(C213):DG(D308) DA(C214):DT(D307) DT(C215):DA(D306) DC(C216):DG(D305) DG(C217):DC(D304) DA(C218):DT(D303) DC(C219):DG(D302) DG(C220):DC(D301) chainA ( 9) ASN262 0 0 0 0 0 0 0 0 0 0 0 5 6 8 2 0 0 0 0 0 ( 12) ALA265 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 13) ALA266 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 16) SER269 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 17) ARG270 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 chainB ( 9) ASN262 0 0 0 0 0 1 8 6 5 0 0 0 0 0 0 0 0 0 0 0 ( 12) ALA265 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ALA266 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER269 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG270 0 0 0 0 0 0 0 0 4 8 11 0 0 0 0 0 0 0 0 0 prot.sequence kaerKrmrNriAAskSRkrkleriarleekvktlkaqnselastanmlreqvaqlk/kaerkrmrNriAAskSRkrkleriarleekvktlkaqnselastanmlreqvaqlkq >1jt0_ABCD:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF A COOPERATIVE QACR-DNA COMPLEX organism=STAPHYLOCOCCUS AUREUS DNA sequence DC(E7):DG(F34) DT(E8):DA(F33) DT(E9):DA(F32) DA(E10):DT(F31) DT(E11):DA(F30) DA(E12):DT(F29) DG(E13):DC(F28) DA(E14):DT(F27) DC(E15):DG(F26) DC(E16):DG(F25) DG(E17):DC(F24) DA(E18):DT(F23) DT(E19):DA(F22) DC(E20):DG(F21) DG(E21):DC(F20) DA(E22):DT(F19) DT(E23):DA(F18) DC(E24):DG(F17) DG(E25):DC(F16) DG(E26):DC(F15) DT(E27):DA(F14) DC(E28):DG(F13) DT(E29):DA(F12) DA(E30):DT(F11) DT(E31):DA(F10) DA(E32):DT(F9) DA(E33):DT(F8) DG(E34):DC(F7) chainA ( 24) THR25 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER35 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS36 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ASN38 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR40 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 9 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 24) THR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 35) LYS36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ASN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 39) TYR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 7 0 0 0 0 0 0 0 chainC ( 24) THR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 34) SER35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 ( 35) LYS36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 17 4 3 0 0 0 0 0 0 ( 37) ASN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 ( 39) TYR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 chainD ( 24) THR25 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER35 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS36 0 0 0 0 0 0 2 4 17 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ASN38 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR40 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nlkdkilgvakelfikngynattTgeivklsesSKgNlYYhfktkenlfleilnieeskwqeqwkkeqikaktnrekfylynelsltteyyyplqnaiiefyteyyktnsinekmnklenkyidayhvifkegnlngewsindvnavskiaanavngivtftheqnineriklmnkfsqiflnglskh/nlkdkilgvakelfikngynattTgeivklsesSKgNlYYhfktkenlfleilnieeskwqeqwkkeqikaktnrekfylynelsltteyyyplqnaiiefyteyyktnsinekmnklenkyidayhvifkegnlngewsindvnavskiaanavngivtftheqnineriklmnkfsqiflnglskh/nlkdkilgvakelfikngynattTgeivklsesSKgNlYYhfktkenlfleilnieeskwqeqwkkeqikaktnrekfylynelsltteyyyplqnaiiefyteyyktnsinekmnklenkyidayhvifkegnlngewsindvnavskiaanavngivtftheqnineriklmnkfsqiflnglskh/nlkdkilgvakelfikngynattTgeivklsesSKgNlYYhfktkenlfleilnieeskwqeqwkkeqikaktnrekfylynelsltteyyyplqnaiiefyteyyktnsinekmnklenkyidayhvifkegnlngewsindvnavskiaanavngivtftheqnineriklmnkfsqiflngl >1jt0_C:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF A COOPERATIVE QACR-DNA COMPLEX organism=STAPHYLOCOCCUS AUREUS DNA sequence DC(F7):DG(E34) DT(F8):DA(E33) DT(F9):DA(E32) DA(F10):DT(E31) DT(F11):DA(E30) DA(F12):DT(E29) DG(F13):DC(E28) DA(F14):DT(E27) DC(F15):DG(E26) DC(F16):DG(E25) DG(F17):DC(E24) DA(F18):DT(E23) DT(F19):DA(E22) DC(F20):DG(E21) DG(F21):DC(E20) DA(F22):DT(E19) DT(F23):DA(E18) DC(F24):DG(E17) DG(F25):DC(E16) DG(F26):DC(E15) DT(F27):DA(E14) DC(F28):DG(E13) DT(F29):DA(E12) DA(F30):DT(E11) DT(F31):DA(E10) DA(F32):DT(E9) DA(F33):DT(E8) DG(F34):DC(E7) chainC ( 24) THR25 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER35 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS36 0 0 0 0 0 0 3 4 17 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ASN38 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR40 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nlkdkilgvakelfikngynattTgeivklsesSKgNlYYhfktkenlfleilnieeskwqeqwkkeqikaktnrekfylynelsltteyyyplqnaiiefyteyyktnsinekmnklenkyidayhvifkegnlngewsindvnavskiaanavngivtftheqnineriklmnkfsqiflnglskh >1jwl_AB:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF THE DIMERIC LAC REPRESSOR/OPERATOR O1/ONPF COMPLEX organism=Escherichia coli DNA sequence DG(E6):DC(D19) DT(E7):DA(D18) DT(E8):DA(D17) DA(E9):DT(D16) DT(E10):DA(D15) DC(E11):DG(D14) DC(E12):DG(D13) DG(E13):DC(D12) DC(E14):DG(D11) DT(E15):DA(D10) DC(E16):DG(D9) DA(E17):DT(D8) DC(E18):DG(D7) DA(E19):DT(D6) chainA ( 17) GLN18 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 28) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 52) ALA53 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 0 1 1 0 0 0 0 0 chainB ( 17) GLN18 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 28) HIS29 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA53 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 3 3 0 0 0 0 0 0 0 prot.sequence kpvtlydvaeyagvsyQtvsrvvnqasHvsaktrekveaamaelnyipnrvAqqLAgkqslligvatsslalhapsqivaaiksradqlgasvvvsmversgveacktavhnllaqrvsgliinyplddqdaiaveaactnvpalfldvsdqtpinsiifshedgtrlgvehlvalghqqiallagplssvsarlrlagwhkyltrnqiqpiaeregdwsamsgfqqtmqmlnegivptamlvandqmalgamraitesglrvgadisvvgyddtedsscyipplttikqdfrllgqtsvdrllqlsqgqavkgnqllpvslvkrkttl/kpvtlydvaeyagvsyQtvsrvvnqasHvsaktrekveaamaelnyipnrvAqqLAgkqslligvatsslalhapsqivaaiksradqlgasvvvsmversgveacktavhnllaqrvsgliinyplddqdaiaveaactnvpalfldvsdqtpinsiifshedgtrlgvehlvalghqqiallagplssvsarlrlagwhkyltrnqiqpiaeregdwsamsgfqqtmqmlnegivptamlvandqmalgamraitesglrvgadisvvgyddtedsscyipplttikqdfrllgqtsvdrllqlsqgqavkgnqllpvslvkrkttl >1jwl_B:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF THE DIMERIC LAC REPRESSOR/OPERATOR O1/ONPF COMPLEX organism=Escherichia coli DNA sequence DT(D6):DA(E19) DG(D7):DC(E18) DT(D8):DA(E17) DG(D9):DC(E16) DA(D10):DT(E15) DG(D11):DC(E14) DC(D12):DG(E13) DG(D13):DC(E12) DG(D14):DC(E11) DA(D15):DT(E10) DT(D16):DA(E9) DA(D17):DT(E8) DA(D18):DT(E7) DC(D19):DG(E6) chainB ( 17) GLN18 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 28) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 52) ALA53 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 0 3 3 0 0 0 0 0 prot.sequence kpvtlydvaeyagvsyQtvsrvvnqasHvsaktrekveaamaelnyipnrvAqqLAgkqslligvatsslalhapsqivaaiksradqlgasvvvsmversgveacktavhnllaqrvsgliinyplddqdaiaveaactnvpalfldvsdqtpinsiifshedgtrlgvehlvalghqqiallagplssvsarlrlagwhkyltrnqiqpiaeregdwsamsgfqqtmqmlnegivptamlvandqmalgamraitesglrvgadisvvgyddtedsscyipplttikqdfrllgqtsvdrllqlsqgqavkgnqllpvslvkrkttl >1jx4_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF A Y-FAMILY DNA POLYMERASE IN A TERNARY COMPLEX WITH DNA SUBSTRATES AND AN INCOMING NUCLEOTIDE organism=Sulfolobus solfataricus DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DC(P11):DG(T8) DT(P12):DA(T7) DA(P13):DT(T6) ADI(A1014):DT(T5) chainA ( 7) ASP7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 10) TYR10 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 11) PHE11 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 44) ALA44 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 45) THR45 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 48) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 51) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 76) MET76 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (105) ASP105 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (159) LYS159 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (244) SER244 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (332) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (336) ARG336 0 0 0 0 0 0 0 0 0 0 3 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeaKakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >1jxl_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF A Y-FAMILY DNA POLYMERASE IN A TERNARY COMPLEX WITH DNA SUBSTRATES AND AN INCOMING NUCLEOTIDE organism=Sulfolobus solfataricus DNA sequence DC(T3):DG3(A401) DA(T5):DT(P12) DA(T6):DT(P11) BRU(T7):DA(P10) DC(T8):DG(P9) DC(T9):DG(P8) DT(T10):DA(P7) BRU(T11):DA(P6) DC(T12):DG(P5) DC(T13):DG(P4) DC(T14):DG(P3) DC(T15):DG(P2) DC(T16):DG(P1) chainA ( 7) ASP7 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) TYR10 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) PHE11 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL32 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA44 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR45 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG51 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 5 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP105 5 0 0 0 0 0 0 0 0 0 0 0 0 (106) GLU106 3 0 0 0 0 0 0 0 0 0 0 0 0 (159) LYS159 2 0 0 0 0 0 0 0 0 0 0 0 0 (244) SER244 0 0 0 1 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 3 2 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >1k3w_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A TRAPPED REACTION INTERMEDIATE OF THE DNA REPAIR ENZYME ENDONUCLEASE VIII WITH DNA organism=Escherichia coli DNA sequence DC(C422):DG(B412) DA(C423):DT(B411) DG(C424):DC(B410) DG(C425):DC(B409) DA(C426):DT(B408) DG(C428):DC(B406) DA(C429):DT(B405) chainA ( 69) GLN69 0 0 0 0 0 19 0 ( 70) LEU70 0 0 0 0 10 12 0 ( 71) TYR71 0 0 0 0 12 0 0 (244) ARG252 0 0 0 0 0 6 0 prot.sequence pegpeirraadnleaaikgkpltdvwfafpqlktyqsqligqhvthvetrgkallthfsndltlyshnQLYgvwrvvdtgeepqttrvlrvklqtadktillysasdiemlrpeqltthpflqrvgpdvldpnltpevvkerllsprfrnrqfagllldqaflaglgnylrveilwqvgltgnhkakdlnaaqldalahalleiprfsyatrgqalfrfkvfhrdgepcercgsiiekttlssRpfywcpgcqh >1k3x_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A TRAPPED REACTION INTERMEDIATE OF THE DNA REPAIR ENZYME ENDONUCLEASE VIII WITH BROMINATED-DNA organism=Escherichia coli DNA sequence DC(C422):DG(B412) DA(C423):BRU(B411) DG(C424):DC(B410) DG(C425):DC(B409) DA(C426):BRU(B408) DG(C428):DC(B406) DA(C429):BRU(B405) DA(C430):BRU(B404) DG(C431):DC(B403) chainA ( 69) GLN69 0 0 0 0 0 23 0 0 0 ( 70) LEU70 0 0 0 0 10 12 0 0 0 ( 71) TYR71 0 0 0 0 12 0 0 0 0 (242) SER251 0 0 0 0 0 0 0 2 0 (243) ARG252 0 0 0 0 0 7 0 0 0 prot.sequence pegpeirraadnleaaikgkpltdvwfafpqlktyqsqligqhvthvetrgkallthfsndltlyshnQLygvwrvvdtgeepqttrvlrvklqtadktillysasdiemlrpeqltthpflqrvgpdvldpnltpevvkerllsprfrnrqfagllldqaflaglgnylrveilwqvgltgnhkakdlnaaqldalahalleiprfsyatrgalfrfkvfhrdgepcercgsiiekttlssRpfywcpgcqh >1k4t_A:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes;Eukaryotic_DNA_topoisomerase_I,_dispensable_insert_domain; title=HUMAN DNA TOPOISOMERASE I (70 KDA) IN COMPLEX WITH THE POISON TOPOTECAN AND COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX organism=Homo sapiens DNA sequence DA(D113):DT(B10) DA(D114):DT(B9) DG(D115):DC(B8) DT(D116):DA(B7) DC(D117):DG(B6) DT(D118):DA(B5) DT(D119):DA(B4) DT(D120):DA(B3) DT(D121):DA(B2) DT(D122):DA(B1) chainA (164) ARG364 6 0 0 0 0 0 0 0 0 0 (226) TYR426 0 0 2 6 0 0 0 0 0 0 (228) MET428 0 0 1 0 0 0 0 0 0 0 (236) LYS436 0 1 0 0 0 0 0 0 0 0 (291) ASN491 0 0 0 1 3 0 0 0 0 0 (332) LYS532 4 3 0 0 0 0 0 0 0 0 (522) ASN722 3 0 0 0 0 0 0 0 0 0 prot.sequence qkwkwweeerypegikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkerianfkieppglfrgRgnhpkmgmlkrrimpediiincskdakvpspppghkwkevrhdnkvtwlvswteniqgsiKYiMlnpssriKgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNekeegetadtvgccslrvehinlhpeldgqeyvvefdflgKdsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynranravailcnhqrappktfeksmmnlqtkidakkeqladarrdlksakadakvmkdaktkkvveskkkavqrleeqlmklevqatdreenkqialgtsklNldpritvawckkwgvpiekiynktqrekfawaidmadedyef >1k61_ABCD:Homeodomain-like; title=MATALPHA2 HOMEODOMAIN BOUND TO DNA organism=? DNA sequence DC(E2):DG(F42) DA(E3):DT(F41) DT(E4):DA(F40) DG(E5):DC(F39) DT(E6):DA(F38) DA(E7):DT(F37) DA(E8):DT(F36) DT(E9):DA(F35) DT(E10):DA(F34) DC(E11):DG(F33) DA(E12):DT(F32) DT(E13):DA(F31) DT(E14):DA(F30) DT(E15):DA(F29) DA(E16):DT(F28) DC(E17):DG(F27) DA(E18):DT(F26) DC(E19):DG(F25) DG(E20):DC(F24) DC(E21):DG(F23) chainA ( 3) HIS134 0 0 0 0 0 0 0 0 0 0 0 5 7 4 0 0 0 0 0 0 ( 4) ARG135 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 0 0 0 0 ( 47) ASN178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 ( 50) SER181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 51) ASN182 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 ( 54) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 14 14 0 0 0 chainB ( 3) HIS134 0 0 0 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG135 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN178 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER181 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN182 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG185 0 0 14 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 45) ASN178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 ( 49) ASN182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 52) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 7 chainD ( 1) ARG132 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ILE174 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) LYS177 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 ( 47) ASN178 0 0 0 0 0 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN182 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rgHRftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvSNrrRkektit/rgHRftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvSNrrRkekti/hrftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvsNrrRkekt/RghrftkenvrileswfaknienpyldtkglenlmkntslsrIqiKNwvSNrrrkekt >1k61_B:Homeodomain-like; title=MATALPHA2 HOMEODOMAIN BOUND TO DNA organism=? DNA sequence DG(F23):DC(E21) DC(F24):DG(E20) DG(F25):DC(E19) DT(F26):DA(E18) DG(F27):DC(E17) DT(F28):DA(E16) DA(F29):DT(E15) DA(F30):DT(E14) DA(F31):DT(E13) DT(F32):DA(E12) DG(F33):DC(E11) DA(F34):DT(E10) DA(F35):DT(E9) DT(F36):DA(E8) DT(F37):DA(E7) DA(F38):DT(E6) DC(F39):DG(E5) DA(F40):DT(E4) DT(F41):DA(E3) DG(F42):DC(E2) chainB ( 3) HIS134 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 0 0 0 0 0 ( 4) ARG135 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 ( 47) ASN178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 ( 50) SER181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 ( 51) ASN182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 ( 54) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 13 14 0 0 prot.sequence rgHRftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvSNrrRkekti >1k6o_ABC:"Winged_helix"_DNA-binding_domain;SRF-like; title=CRYSTAL STRUCTURE OF A TERNARY SAP-1/SRF/C-FOS SRE DNA COMPLEX organism=HOMO SAPIENS DNA sequence DT(E201):DA(D123) DG(E202):DC(D122) DT(E203):DA(D121) DC(E204):DG(D120) DC(E205):DG(D119) DT(E206):DA(D118) DA(E207):DT(D117) DA(E208):DT(D116) DT(E209):DA(D115) DA(E210):DT(D114) DT(E211):DA(D113) DG(E212):DC(D112) DG(E213):DC(D111) DA(E214):DT(D110) DC(E215):DG(D109) DA(E216):DT(D108) DT(E217):DA(D107) DC(E218):DG(D106) DC(E219):DG(D105) DT(E220):DA(D104) DG(E221):DC(D103) DT(E222):DA(D102) DG(E223):DC(D101) chainA ( 56) LYS358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 59) ARG361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 19 25 0 0 0 0 ( 62) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 15 2 0 0 ( 63) TYR365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 2 0 0 0 0 0 chainB ( 4) THR140 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 ( 7) ARG143 0 0 0 0 0 0 0 0 7 10 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) SER162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 27) LYS163 0 0 0 0 0 0 0 0 0 0 0 5 4 7 0 0 0 0 0 0 0 0 0 chainC ( 3) THR140 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG143 0 0 0 0 2 6 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR158 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS163 0 0 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence saitlwqfllqllqkpqnkhmicwtsndgqfkllqaeevarlwgirknkpnmnydKlsRalRYyyvkniikkvngqkfvykfvsypeil/gkkTrgRvkikmefidnklrryttfSKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclns/kkTrgRvkikmefidnklrrYttfsKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclns >1k6o_C:SRF-like; title=CRYSTAL STRUCTURE OF A TERNARY SAP-1/SRF/C-FOS SRE DNA COMPLEX organism=HOMO SAPIENS DNA sequence DT(E201):DA(D123) DG(E202):DC(D122) DT(E203):DA(D121) DC(E204):DG(D120) DC(E205):DG(D119) DT(E206):DA(D118) DA(E207):DT(D117) DA(E208):DT(D116) DT(E209):DA(D115) DA(E210):DT(D114) DT(E211):DA(D113) DG(E212):DC(D112) DG(E213):DC(D111) DA(E214):DT(D110) DC(E215):DG(D109) DA(E216):DT(D108) DT(E217):DA(D107) DC(E218):DG(D106) DC(E219):DG(D105) DT(E220):DA(D104) DG(E221):DC(D103) DT(E222):DA(D102) DG(E223):DC(D101) chainC ( 3) THR140 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG143 0 0 0 0 2 6 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR158 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS163 0 0 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkTrgRvkikmefidnklrrYttfsKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclns >1k78_A:Homeodomain-like; title=PAX5(1-149)+ETS-1(331-440)+DNA organism=HOMO SAPIENS DNA sequence DG(C3):DC(D27) DT(C4):DA(D26) DG(C5):DC(D25) DC(C6):DG(D24) DC(C7):DG(D23) DG(C8):DC(D22) DG(C9):DC(D21) DA(C10):DT(D20) DG(C11):DC(D19) DA(C12):DT(D18) DT(C13):DA(D17) DG(C14):DC(D16) DG(C15):DC(D15) DG(C16):DC(D14) DC(C17):DG(D13) DT(C18):DA(D12) DC(C19):DG(D11) DC(C20):DG(D10) DA(C21):DT(D9) DG(C22):DC(D8) DT(C23):DA(D7) DG(C24):DC(D6) DG(C25):DC(D5) DC(C26):DG(D4) DC(C27):DG(D3) DT(G1):DA(D2) DG(G3):DC(H27) DT(G4):DA(H26) DG(G5):DC(H25) DC(G6):DG(H24) DC(G7):DG(H23) DG(G8):DC(H22) DG(G9):DC(H21) DA(G10):DT(H20) DG(G11):DC(H19) DA(G12):DT(H18) DT(G13):DA(H17) DG(G14):DC(H16) DG(G15):DC(H15) DG(G16):DC(H14) DC(G17):DG(H13) DT(G18):DA(H12) DC(G19):DG(H11) DC(G20):DG(H10) DA(G21):DT(H9) DG(G22):DC(H8) DT(G23):DA(H7) DG(G24):DC(H6) DG(G25):DC(H5) DC(G26):DG(H4) DC(G27):DG(H3) chainA ( 11) ASN29 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER61 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) HIS62 0 0 0 0 0 0 0 15 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) SER66 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS67 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ILE83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) SER86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) SER131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) SER133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) SER134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) ASN136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ARG137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvnqlggvfvNgRplpdvvrqrivelahqgvrpcdisrqlrvSHgcvSKilgryyetgsikpgvIggSkpkvatpkvvekiaeykrqnptmfaweirdrllaervcdndtvpSvSSiNRiirtk >1k78_BI:Homeodomain-like; title=PAX5(1-149)+ETS-1(331-440)+DNA organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DG(D3):DC(C27) DG(D4):DC(C26) DC(D5):DG(C25) DC(D6):DG(C24) DA(D7):DT(C23) DC(D8):DG(C22) DT(D9):DA(C21) DG(D10):DC(C20) DG(D11):DC(C19) DA(D12):DT(C18) DG(D13):DC(C17) DC(D14):DG(C16) DC(D15):DG(C15) DC(D16):DG(C14) DA(D17):DT(C13) DT(D18):DA(C12) DC(D19):DG(C11) DT(D20):DA(C10) DC(D21):DG(C9) DC(D22):DG(C8) DG(D23):DC(C7) DG(D24):DC(C6) DC(D25):DG(C5) DA(D26):DT(C4) DC(D27):DG(C3) chainB ( 54) LYS388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 57) ARG391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 16 24 0 0 0 0 0 ( 60) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 17 0 0 0 0 ( 61) TYR395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 chainI ( 3) SER86 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) SER131 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER133 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG137 0 0 0 0 0 0 10 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG140 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk/ggSkpkvatpkvvekiaeykrqnptmfaweirdrllaervcdndtvpSvSsinRiiRt >1k78_EF:Homeodomain-like; title=PAX5(1-149)+ETS-1(331-440)+DNA organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DG(H3):DC(G27) DG(H4):DC(G26) DC(H5):DG(G25) DC(H6):DG(G24) DA(H7):DT(G23) DC(H8):DG(G22) DT(H9):DA(G21) DG(H10):DC(G20) DG(H11):DC(G19) DA(H12):DT(G18) DG(H13):DC(G17) DC(H14):DG(G16) DC(H15):DG(G15) DC(H16):DG(G14) DA(H17):DT(G13) DT(H18):DA(G12) DC(H19):DG(G11) DT(H20):DA(G10) DC(H21):DG(G9) DC(H22):DG(G8) DG(H23):DC(G7) DG(H24):DC(G6) DC(H25):DG(G5) DA(H26):DT(G4) DC(H27):DG(G3) chainE ( 11) ASN29 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 ( 44) HIS62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 15 0 0 0 0 0 0 0 ( 48) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 49) LYS67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 65) ILE83 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) SER86 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) SER131 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) SER133 0 1 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ARG137 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 54) GLU387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 55) LYS388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 58) ARG391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 18 25 0 0 0 0 0 ( 61) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 17 0 0 0 0 ( 62) TYR395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 prot.sequence gvnqlggvfvNgrplpdvvrqrivelahqgvrpcdisrqlrvSHgcvSKilgryyetgsikpgvIggSkpkvatpkvvekiaeykrqnptmfaweirdrllaervcdndtvpSvSsinRiirtk/piqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk >1k79_D:"Winged_helix"_DNA-binding_domain; title=ETS-1(331-440)+GGAA DUPLEX organism=Mus musculus DNA sequence DA(F2):DT(E15) DC(F3):DG(E14) DA(F4):DT(E13) DT(F5):DA(E12) DT(F6):DA(E11) DT(F7):DA(E10) DC(F8):DG(E9) DC(F9):DG(E8) DG(F10):DC(E7) DG(F11):DC(E6) DC(F12):DG(E5) DA(F13):DT(E4) DC(F14):DG(E3) DT(F15):DA(E2) chainD ( 56) LYS388 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 59) ARG391 0 0 0 0 1 4 17 26 0 0 0 0 0 0 ( 62) ARG394 0 0 0 0 0 0 0 13 13 0 0 0 0 0 ( 63) TYR395 0 0 0 8 8 6 1 0 0 0 0 0 0 0 prot.sequence gpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk >1k7a_A:"Winged_helix"_DNA-binding_domain; title=ETS-1(331-440)+GGAG DUPLEX organism=Mus musculus DNA sequence DC(C3):DG(B14) DA(C4):DT(B13) DT(C5):DA(B12) DC(C6):DG(B11) DT(C7):DA(B10) DC(C8):DG(B9) DC(C9):DG(B8) DG(C10):DC(B7) DG(C11):DC(B6) DC(C12):DG(B5) DA(C13):DT(B4) DC(C14):DG(B3) DT(C15):DA(B2) chainA ( 56) LYS388 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 59) ARG391 0 0 0 0 8 12 24 0 0 0 0 0 0 ( 62) ARG394 0 0 0 0 0 0 16 14 0 0 0 0 0 ( 63) TYR395 0 0 13 7 6 0 0 0 0 0 0 0 0 prot.sequence gpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk >1k82_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF E.COLI FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FPG) COVALENTLY TRAPPED WITH DNA organism=Escherichia coli DNA sequence DC(f1):DG(e13) DC(f2):DG(e12) DA(f3):DT(e11) DG(f4):DC(e10) DG(f5):DC(e9) DA(f6):DT(e8) DG(f7):DC(e7) DA(f8):DC(e6) DA(f9):DT(e5) DG(f10):DT(e4) DC(f11):DC(e3) DC(f12):DG(e2) DG(f13):DG(e1) chainA ( 33) ARG33 0 0 0 0 0 0 10 5 3 0 0 0 0 ( 73) MET73 0 0 0 0 0 0 14 0 0 0 0 0 0 (108) ARG108 0 0 0 0 0 39 17 1 0 0 0 0 0 (110) PHE110 0 0 0 0 0 0 29 25 0 0 0 0 0 (149) LYS149 0 0 0 0 0 0 0 0 0 0 0 0 1 (159) ASP159 0 0 0 0 0 0 0 0 0 0 0 0 1 (248) ALA256 0 0 0 0 0 0 0 0 0 0 1 0 0 (249) GLN257 0 0 0 0 0 0 0 0 0 6 0 0 0 (250) ARG258 0 0 0 0 0 0 6 1 0 0 0 0 0 prot.sequence pelpevetsrrgiephlvgatilhavvrngrlRwpvseeiyrlsdqpvlsvqrrakylllelpegwiiihlgMsgslrilpeelppekhdhvdlvmsngkvlrytdpRrFgawlwtkeleghnvlthlgpeplsddfngeylhqkcakKktaikpwlmDnklvvgvgniyaseslfaagihpdrlasslslaecellarvikavllrsieqggttlkpgyfaqelqvygrkgepcrvcgtpivatkhAQRatfycrqcqk >1k82_AB:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF E.COLI FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FPG) COVALENTLY TRAPPED WITH DNA organism=Escherichia coli DNA sequence DC(e14):DG(f25) DC(e15):DG(f24) DA(e16):DT(f23) DG(e17):DC(f22) DG(e18):DC(f21) DA(e19):DT(f20) DG(e20):DC(f19) DA(e21):DC(f18) DA(e22):DT(f17) DG(e23):DT(f16) DC(e24):DC(f15) DC(e25):DG(f14) chainA chainB ( 33) ARG33 0 0 0 0 0 0 11 5 3 0 0 0 ( 73) MET73 0 0 0 0 0 0 13 0 0 0 0 0 (108) ARG108 0 0 0 0 0 36 15 1 0 0 0 0 (110) PHE110 0 0 0 0 0 0 26 24 0 0 0 0 (248) ALA256 0 0 0 0 0 0 0 0 0 0 1 0 (249) GLN257 0 0 0 0 0 0 0 0 0 6 0 0 (250) ARG258 0 0 0 0 0 0 5 1 0 0 0 0 prot.sequence pelpevetsrrgiephlvgatilhavvrngrlrwpvseeiyrlsdqpvlsvqrrakylllelpegwiiihlgmsgslrilpeelppekhdhvdlvmsngkvlrytdprrfgawlwtkeleghnvlthlgpeplsddfngeylhqkcakkktaikpwlmdnklvvgvgniyaseslfaagihpdrlasslslaecellarvikavllrsieqggttlkpgyfaqelqvygrkgepcrvcgtpivatkhaqratfycrqcqk/pelpevetsrrgiephlvgatilhavvrngrlRwpvseeiyrlsdqpvlsvqrrakylllelpegwiiihlgMsgslrilpeelppekhdhvdlvmsngkvlrytdpRrFgawlwtkeleghnvlthlgpeplsddfngeylhqkcakkktaikpwlmdnklvvgvgniyaseslfaagihpdrlasslslaecellarvikavllrsieqggttlkpgyfaqelqvygrkgepcrvcgtpivatkhAQRatfycrqcqk >1k82_CD:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF E.COLI FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FPG) COVALENTLY TRAPPED WITH DNA organism=Escherichia coli DNA sequence DC(g14):DG(h25) DC(g15):DG(h24) DA(g16):DT(h23) DG(g17):DC(h22) DG(g18):DC(h21) DA(g19):DT(h20) DG(g20):DC(h19) DA(g21):DC(h18) DA(g22):DT(h17) DG(g23):DT(h16) DC(g24):DC(h15) DC(g25):DG(h14) chainC chainD ( 33) ARG33 0 0 0 0 0 0 11 6 3 0 0 0 ( 73) MET73 0 0 0 0 0 0 12 0 0 0 0 0 (108) ARG108 0 0 0 0 0 37 15 1 0 0 0 0 (110) PHE110 0 0 0 0 0 0 29 27 0 0 0 0 (248) ALA256 0 0 0 0 0 0 0 0 0 0 1 0 (249) GLN257 0 0 0 0 0 0 0 0 0 2 0 0 (250) ARG258 0 0 0 0 0 0 6 1 0 0 0 0 prot.sequence pelpevetsrrgiephlvgatilhavvrngrlrwpvseeiyrlsdqpvlsvqrrakylllelpegwiiihlgmsgslrilpeelppekhdhvdlvmsngkvlrytdprrfgawlwtkeleghnvlthlgpeplsddfngeylhqkcakkktaikpwlmdnklvvgvgniyaseslfaagihpdrlasslslaecellarvikavllrsieqggttlkpgyfaqelqvygrkgepcrvcgtpivatkhaqratfycrqcqk/pelpevetsrrgiephlvgatilhavvrngrlRwpvseeiyrlsdqpvlsvqrrakylllelpegwiiihlgMsgslrilpeelppekhdhvdlvmsngkvlrytdpRrFgawlwtkeleghnvlthlgpeplsddfngeylhqkcakkktaikpwlmdnklvvgvgniyaseslfaagihpdrlasslslaecellarvikavllrsieqggttlkpgyfaqelqvygrkgepcrvcgtpivatkhAQRatfycrqcqk >1kb2_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF VDR DNA-BINDING DOMAIN BOUND TO MOUSE OSTEOPONTIN (SPP) RESPONSE ELEMENT organism=Homo sapiens DNA sequence DT(D419):DA(C418) DG(D420):DC(C417) DA(D421):DT(C416) DA(D422):DT(C415) DC(D423):DG(C414) DC(D424):DG(C413) DT(D425):DA(C412) DC(D426):DG(C411) DG(D427):DC(C410) DT(D428):DA(C409) DG(D429):DC(C408) DA(D430):DT(C407) DA(D431):DT(C406) DC(D432):DG(C405) DC(D433):DG(C404) DG(D434):DC(C403) DT(D435):DA(C402) DG(D436):DC(C401) chainA ( 21) GLU42 0 0 0 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 ( 24) LYS45 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 ( 28) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 ( 29) ARG50 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 ( 82) LYS103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainB ( 21) GLU242 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS245 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG249 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG250 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ricgvcgdratgfhfnamtcEgcKgffRRsmkrkalftcpfngdcritkdnrrhcqacrlkrcvdigmmkefiltdeevqrKremilkr/ricgvcgdratgfhfnamtcEgcKgffRRsmkrkalftcpfngdcritkdnrrhcqacrlkrcvdigmmkefiltdeevqrkrem >1kb2_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF VDR DNA-BINDING DOMAIN BOUND TO MOUSE OSTEOPONTIN (SPP) RESPONSE ELEMENT organism=Homo sapiens DNA sequence DT(D419):DA(C418) DG(D420):DC(C417) DA(D421):DT(C416) DA(D422):DT(C415) DC(D423):DG(C414) DC(D424):DG(C413) DT(D425):DA(C412) DC(D426):DG(C411) DG(D427):DC(C410) DT(D428):DA(C409) DG(D429):DC(C408) DA(D430):DT(C407) DA(D431):DT(C406) DC(D432):DG(C405) DC(D433):DG(C404) DG(D434):DC(C403) DT(D435):DA(C402) DG(D436):DC(C401) chainB ( 21) GLU242 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS245 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG249 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG250 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ricgvcgdratgfhfnamtcEgcKgffRRsmkrkalftcpfngdcritkdnrrhcqacrlkrcvdigmmkefiltdeevqrkrem >1kb4_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF VDR DNA-BINDING DOMAIN BOUND TO A CANONICAL DIRECT REPEAT WITH THREE BASE PAIR SPACER (DR3) RESPONSE ELEMENT organism=Homo sapiens DNA sequence DC(C401):DG(D436) DA(C402):DT(D435) DC(C403):DG(D434) DA(C404):DT(D433) DG(C405):DC(D432) DG(C406):DC(D431) DT(C407):DA(D430) DC(C408):DG(D429) DA(C409):DT(D428) DC(C410):DG(D427) DG(C411):DC(D426) DA(C412):DT(D425) DA(C413):DT(D424) DG(C414):DC(D423) DG(C415):DC(D422) DT(C416):DA(D421) DC(C417):DG(D420) DA(C418):DT(D419) chainA ( 21) GLU42 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS45 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG49 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG50 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 ( 82) LYS103 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ricgvcgdratgfhfnamtcEgcKgffRRsmkrkalftcpfngdcritkdnrrhcqacrlkrcvdigmmkefiltdeevqrKremilkrkeee >1kb4_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF VDR DNA-BINDING DOMAIN BOUND TO A CANONICAL DIRECT REPEAT WITH THREE BASE PAIR SPACER (DR3) RESPONSE ELEMENT organism=Homo sapiens DNA sequence DC(C401):DG(D436) DA(C402):DT(D435) DC(C403):DG(D434) DA(C404):DT(D433) DG(C405):DC(D432) DG(C406):DC(D431) DT(C407):DA(D430) DC(C408):DG(D429) DA(C409):DT(D428) DC(C410):DG(D427) DG(C411):DC(D426) DA(C412):DT(D425) DA(C413):DT(D424) DG(C414):DC(D423) DG(C415):DC(D422) DT(C416):DA(D421) DC(C417):DG(D420) DA(C418):DT(D419) chainA ( 21) GLU42 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS45 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG49 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG50 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 ( 82) LYS103 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) GLU242 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 4 0 0 ( 24) LYS245 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 ( 28) ARG249 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 29) ARG250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 prot.sequence ricgvcgdratgfhfnamtcEgcKgffRRsmkrkalftcpfngdcritkdnrrhcqacrlkrcvdigmmkefiltdeevqrKremilkrkeee/ricgvcgdratgfhfnamtcEgcKgffRRsmkrkalftcpfngdcritkdnrrhcqacrlkrcvdigmmkefiltdeevqrkremilkrkeeealkdsl >1kb6_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF VDR DNA-BINDING DOMAIN BOUND TO RAT OSTEOCALCIN (OC) RESPONSE ELEMENT organism=Homo sapiens DNA sequence DC(C401):DG(D436) DA(C402):DT(D435) DC(C403):DG(D434) DG(C404):DC(D433) DG(C405):DC(D432) DG(C406):DC(D431) DT(C407):DA(D430) DG(C408):DC(D429) DA(C409):DT(D428) DA(C410):DT(D427) DT(C411):DA(D426) DG(C412):DC(D425) DA(C413):DT(D424) DG(C414):DC(D423) DG(C415):DC(D422) DA(C416):DT(D421) DC(C417):DG(D420) DA(C418):DT(D419) chainA ( 22) GLU42 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS45 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG49 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG50 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 ( 83) LYS103 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pricgvcgdratgfhfnamtcEgcKgffRRsmkrkalftcpfngdcritkdnrrhcqacrlkrcvdigmmkefiltdeevqrKremilkrkeee >1kb6_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF VDR DNA-BINDING DOMAIN BOUND TO RAT OSTEOCALCIN (OC) RESPONSE ELEMENT organism=Homo sapiens DNA sequence DC(C401):DG(D436) DA(C402):DT(D435) DC(C403):DG(D434) DG(C404):DC(D433) DG(C405):DC(D432) DG(C406):DC(D431) DT(C407):DA(D430) DG(C408):DC(D429) DA(C409):DT(D428) DA(C410):DT(D427) DT(C411):DA(D426) DG(C412):DC(D425) DA(C413):DT(D424) DG(C414):DC(D423) DG(C415):DC(D422) DA(C416):DT(D421) DC(C417):DG(D420) DA(C418):DT(D419) chainA ( 22) GLU42 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS45 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG49 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG50 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 ( 83) LYS103 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) GLU242 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 3 0 0 ( 25) LYS245 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 ( 29) ARG249 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 ( 30) ARG250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 8 prot.sequence pricgvcgdratgfhfnamtcEgcKgffRRsmkrkalftcpfngdcritkdnrrhcqacrlkrcvdigmmkefiltdeevqrKremilkrkeee/pricgvcgdratgfhfnamtcEgcKgffRRsmkrkalftcpfngdcritkdnrrhcqacrlkrcvdigmmkefiltdeevqrkremilkrkeeealkdslr >1kbu_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRE RECOMBINASE BOUND TO A LOXP HOLLIDAY JUNCTION organism=Enterobacteria phage P1 DNA sequence DA(C1):DT(D34) DT(C2):DA(D33) DA(C3):DT(D32) DA(C4):DT(D31) DG(C5):DC(D30) DT(C6):DA(D29) DT(C7):DA(D28) DC(C8):DG(D27) DG(C9):DC(D26) DT(C10):DA(D25) DA(C11):DT(D24) DT(C12):DA(D23) DA(C13):DT(D22) DA(C14):DT(D21) DT(C15):DA(D20) DG(C16):DC(D19) chainA chainB ( 22) HIS40 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 ( 23) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 25) LYS43 0 0 0 0 0 0 0 1 9 9 0 0 0 0 0 0 ( 26) MET44 0 0 0 0 0 0 0 0 0 3 6 8 0 0 0 0 ( 29) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 68) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 6 7 1 0 ( 69) THR87 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 72) GLN90 0 0 0 0 0 0 0 0 0 0 0 15 9 2 0 0 ( 76) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (183) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 6 6 1 0 (223) ARG241 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (225) ARG243 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS244 5 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER257 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 (241) ARG259 0 0 0 0 0 1 12 17 15 0 0 0 0 0 0 0 (244) GLU262 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 (264) ARG282 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 prot.sequence atsdevrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdyllylqarglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcrvrkngvaapsatsqlstralegifeathrliygakddsgqrylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled/tsdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiQQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnlgamvrlled >1kc6_A:Restriction_endonuclease-like; title=HINCII BOUND TO COGNATE DNA organism=Haemophilus influenzae DNA sequence DC(E2):DG(F13) DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DT(E6):DA(F9) DC(E7):DG(F8) DG(E8):DC(F7) DA(E9):DT(F6) DC(E10):DG(F5) DC(E11):DG(F4) DG(E12):DC(F3) DG(E13):DC(F2) chainA (100) GLN109 0 0 0 0 0 0 7 6 2 0 0 0 (101) ASN110 0 0 0 0 0 0 0 2 1 0 0 0 (128) ALA137 0 0 0 1 0 0 0 0 0 0 0 0 (129) GLN138 0 0 42 24 0 0 0 0 0 0 0 0 (131) PRO140 0 0 0 1 2 0 0 0 0 0 0 0 (132) ASN141 0 0 0 0 15 7 3 0 0 0 0 0 (190) TYR199 0 0 4 0 0 0 0 0 0 0 0 0 (192) ASN201 0 0 2 9 0 0 0 0 0 0 0 0 (194) ALA203 0 0 0 0 1 0 0 0 0 0 0 0 (195) ALA204 0 0 0 3 3 0 0 0 0 0 0 0 (196) ALA205 0 0 0 0 0 0 3 3 0 0 0 0 (198) GLN207 0 0 0 0 0 0 2 0 0 0 0 0 (200) GLN209 0 0 0 6 1 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrpaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrnisksAQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil >1kc6_CD:Restriction_endonuclease-like; title=HINCII BOUND TO COGNATE DNA organism=Haemophilus influenzae DNA sequence DC(G2):DG(H13) DC(G3):DG(H12) DG(G4):DC(H11) DG(G5):DC(H10) DT(G6):DA(H9) DC(G7):DG(H8) DG(G8):DC(H7) DA(G9):DT(H6) DC(G10):DG(H5) DC(G11):DG(H4) DG(G12):DC(H3) DG(G13):DC(H2) chainC ( 86) GLN109 0 0 0 0 0 0 4 4 3 0 0 0 (114) GLN138 0 0 32 23 0 0 0 0 0 0 0 0 (116) PRO140 0 0 0 1 2 0 0 0 0 0 0 0 (117) ASN141 0 0 0 0 13 8 2 0 0 0 0 0 (177) ASN201 0 0 0 8 0 0 0 0 0 0 0 0 (179) ALA203 0 0 0 0 1 0 0 0 0 0 0 0 (180) ALA204 0 0 0 3 4 0 0 0 0 0 0 0 (181) ALA205 0 0 0 0 0 0 2 5 0 0 0 0 (183) GLN207 0 0 0 0 0 0 1 0 0 0 0 0 (185) GLN209 0 0 0 6 1 0 0 0 0 0 0 0 chainD ( 94) GLN109 0 0 0 0 3 3 0 0 0 0 0 0 ( 95) ASN110 0 0 0 1 1 0 0 0 0 0 0 0 (123) GLN138 0 0 0 0 0 0 0 0 30 38 0 0 (125) PRO140 0 0 0 0 0 0 0 2 0 0 0 0 (126) ASN141 0 0 0 0 0 1 7 16 0 0 0 0 (178) TYR199 0 0 0 0 0 0 0 0 0 4 0 0 (180) ASN201 0 0 0 0 0 0 0 0 9 1 0 0 (182) ALA203 0 0 0 0 0 0 0 1 0 0 0 0 (183) ALA204 0 0 0 0 0 0 0 3 3 0 0 0 (184) ALA205 0 0 0 0 4 2 0 0 0 0 0 0 (186) GLN207 0 0 0 0 0 3 0 0 0 0 0 0 (188) GLN209 0 0 0 0 0 0 0 1 6 0 0 0 prot.sequence sfikpiyqdinsiligqkvkagepfeklvykflkenlsdltfkqyeylndlfhearyklfnsptllfllsrgkaatenwsifeekQndtadillvkqfyelldvktrnisksaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselyiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi/sfikpiyqdinsiligqkgepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrnisksaQaPNiisayklaqtcakmidnkefdlfdinylevdwlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >1kfv_B:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF LACTOCOCCUS LACTIS FORMAMIDO-PYRIMIDINE DNA GLYCOSYLASE (ALIAS FPG OR MUTM) NON COVALENTLY BOUND TO AN AP SITE CONTAINING DNA. organism=Lactococcus lactis DNA sequence DC(G1):DG(H26) DT(G2):DA(H25) DC(G3):DG(H24) DT(G4):DA(H23) DT(G5):DA(H22) DT(G6):DA(H21) PDI(G7):DC(H20) DT(G8):DA(H19) DT(G9):DA(H18) DT(G10):DA(H17) DC(G11):DG(H16) DT(G12):DA(H15) DC(G13):DG(H14) chainB ( 2) GLU2 0 0 0 0 0 0 7 0 0 0 0 0 0 ( 74) ARG74 0 0 0 0 0 0 0 10 4 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 3 15 0 0 0 0 0 (109) ARG109 0 0 0 0 0 60 14 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 0 10 31 0 0 0 0 0 (171) ASN171 0 0 0 0 0 0 5 0 0 0 0 0 0 (172) ILE172 0 0 0 0 0 0 4 0 0 0 0 0 0 (227) TYR238 0 0 0 0 0 0 3 0 0 0 0 0 0 (249) ARG260 0 0 0 0 0 0 1 8 2 0 0 0 0 prot.sequence gelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMegkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggsgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >1kln_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DG(B2):DC(C29) DC(B3):DG(C28) DC(B4):DG(C27) DT(B5):DA(C26) DC(B6):DG(C25) DG(B7):DC(C24) DC(B8):DG(C23) DG(B9):DC(C21) DG(B10):DC(C20) DC(B11):DG(C19) chainA (132) ARG455 0 0 0 0 0 0 0 0 0 7 (330) VAL663 0 0 0 0 0 0 0 0 0 2 prot.sequence visydnyvtildeetlkawiaklekapvfafatetdsldnisanlvglsfaiepgvaayipvahdyldapdqisreralellkplledekalkvgqnlkydrgilanygielrgiafdtmlesyilnsvagRhdmdslaerwlkhktitfeeiagkgknqltfnqialeeagryaaedadvtlqlhlkmwpdlqkhkgplnvfeniemplvpvlsrierngvkidpkvlhnhseeltlrlaelekkaheiageefnlssqlqtilfekqgikplktseevleelaldyplpkvileyrglaklkstytdklplminpktgrvhtsyhqaVtatgrlsstdpnlqnipvrneegrrirqafiapedyvivsadysqielrimahlsrdkglltafaegkdihrataaevfglpletvtseqrrsakainfgliygmsafglarqlniprkeaqkymdlyferypgvleymertraqakeqgyvetldgrrlylpdikssngarraaaeraainapmqgtaadiikramiavdawlqaeqprvrmimqvhdelvfevhkddvdavakqihqlmenctrldvpllvevgsgenwdqah >1kqq_A:ARID-like; title=SOLUTION STRUCTURE OF THE DEAD RINGER ARID-DNA COMPLEX organism=DROSOPHILA MELANOGASTER DNA sequence DC(C416):DG(B415) DC(C417):DG(B414) DA(C418):DT(B413) DC(C419):DG(B412) DA(C420):DT(B411) DT(C421):DA(B410) DC(C422):DG(B409) DA(C423):DT(B408) DA(C424):DT(B407) DT(C425):DA(B406) DA(C426):DT(B405) DC(C427):DG(B404) DA(C428):DT(B403) DG(C429):DC(B402) DG(C430):DC(B401) chainA ( 90) THR92 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 ( 91) SER93 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 ( 94) LEU96 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 (129) ARG131 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gwsfeeqfkqvrqlyeinddpkrkeflddlfsfmqkrgtpinrlpimaksvldlyelynlviargglvdvinkklwqeiikglhlpssiTSaaLtlrtqymkylypyecekknlstpaelqaaidgnrReg >1ksx_ABEF:Origin_of_replication-binding_domain,_RBD-like; title=CRYSTAL STRUCTURES OF TWO INTERMEDIATES IN THE ASSEMBLY OF THE PAPILLOMAVIRUS REPLICATION INITIATION COMPLEX organism=Bovine papillomavirus DNA sequence DA(C4):DT(G21) DT(C5):DA(G20) DT(C6):DA(G19) DG(C7):DC(G18) DT(C8):DA(G17) DT(C9):DA(G16) DG(C10):DC(G15) DT(C11):DA(G14) DT(C12):DA(G13) DA(C13):DT(G12) DA(C14):DT(G11) DC(C15):DG(G10) DA(C16):DT(G9) DA(C17):DT(G8) DC(C18):DG(G7) DA(C19):DT(G6) DA(C20):DT(G5) DT(C21):DA(G4) chainA ( 26) ASN184 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS186 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) THR187 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) THR188 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ASN184 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS186 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) THR187 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) THR188 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainE ( 26) ASN184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 28) LYS186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 ( 29) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 ( 30) THR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainF ( 26) ASN184 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 28) LYS186 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 30) THR188 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln/atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln/atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln/atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln >1ksx_I:Origin_of_replication-binding_domain,_RBD-like; title=CRYSTAL STRUCTURES OF TWO INTERMEDIATES IN THE ASSEMBLY OF THE PAPILLOMAVIRUS REPLICATION INITIATION COMPLEX organism=Bovine papillomavirus DNA sequence DA(K4):DT(O21) DT(K5):DA(O20) DT(K6):DA(O19) DG(K7):DC(O18) DT(K8):DA(O17) DT(K9):DA(O16) DG(K10):DC(O15) DT(K11):DA(O14) DT(K12):DA(O13) DA(K13):DT(O12) DA(K14):DT(O11) DC(K15):DG(O10) DA(K16):DT(O9) DA(K17):DT(O8) DC(K18):DG(O7) DA(K19):DT(O6) DA(K20):DT(O5) DT(K21):DA(O4) chainI ( 26) ASN184 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS186 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) THR187 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) THR188 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln >1ksx_IM:Origin_of_replication-binding_domain,_RBD-like; title=CRYSTAL STRUCTURES OF TWO INTERMEDIATES IN THE ASSEMBLY OF THE PAPILLOMAVIRUS REPLICATION INITIATION COMPLEX organism=Bovine papillomavirus DNA sequence DA(O4):DT(K21) DT(O5):DA(K20) DT(O6):DA(K19) DG(O7):DC(K18) DT(O8):DA(K17) DT(O9):DA(K16) DG(O10):DC(K15) DT(O11):DA(K14) DT(O12):DA(K13) DA(O13):DT(K12) DA(O14):DT(K11) DC(O15):DG(K10) DA(O16):DT(K9) DA(O17):DT(K8) DC(O18):DG(K7) DA(O19):DT(K6) DA(O20):DT(K5) DT(O21):DA(K4) chainI ( 26) ASN184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 28) LYS186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 ( 29) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 ( 30) THR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainM ( 26) ASN184 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS186 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) THR187 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) THR188 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln/atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln >1ksx_JN:Origin_of_replication-binding_domain,_RBD-like; title=CRYSTAL STRUCTURES OF TWO INTERMEDIATES IN THE ASSEMBLY OF THE PAPILLOMAVIRUS REPLICATION INITIATION COMPLEX organism=Bovine papillomavirus DNA sequence DA(K4):DT(O21) DT(K5):DA(O20) DT(K6):DA(O19) DG(K7):DC(O18) DT(K8):DA(O17) DT(K9):DA(O16) DG(K10):DC(O15) DT(K11):DA(O14) DT(K12):DA(O13) DA(K13):DT(O12) DA(K14):DT(O11) DC(K15):DG(O10) DA(K16):DT(O9) DA(K17):DT(O8) DC(K18):DG(O7) DA(K19):DT(O6) DA(K20):DT(O5) DT(K21):DA(O4) chainJ ( 26) ASN184 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS186 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) THR187 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) THR188 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 chainN ( 26) ASN184 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 28) LYS186 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 30) THR188 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln/atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln >1ksy_A:Origin_of_replication-binding_domain,_RBD-like; title=CRYSTAL STRUCTURES OF TWO INTERMEDIATES IN THE ASSEMBLY OF THE PAPILLOMAVIRUS REPLICATION INITIATION COMPLEX organism=Bovine papillomavirus DNA sequence DA(D1):DT(F21) DT(D2):DA(F20) DA(D3):DT(F19) DA(D4):DT(F18) DT(D5):DA(F17) DT(D6):DA(F16) DG(D7):DC(F15) DT(D8):DA(F14) DT(D9):DA(F13) DG(D10):DC(F12) DT(D11):DA(F11) DC(D12):DG(F10) DA(D13):DT(F9) DA(D14):DT(F8) DC(D15):DG(F7) DA(D16):DT(F6) DA(D17):DT(F5) DT(D18):DA(F4) DT(D19):DA(F3) DA(D20):DT(F2) DT(D21):DA(F1) chainA ( 26) ASN184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 28) LYS186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 ( 29) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 30) THR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln >1ksy_AC:Origin_of_replication-binding_domain,_RBD-like; title=CRYSTAL STRUCTURES OF TWO INTERMEDIATES IN THE ASSEMBLY OF THE PAPILLOMAVIRUS REPLICATION INITIATION COMPLEX organism=Bovine papillomavirus DNA sequence DA(F1):DT(D21) DT(F2):DA(D20) DA(F3):DT(D19) DA(F4):DT(D18) DT(F5):DA(D17) DT(F6):DA(D16) DG(F7):DC(D15) DT(F8):DA(D14) DT(F9):DA(D13) DG(F10):DC(D12) DA(F11):DT(D11) DC(F12):DG(D10) DA(F13):DT(D9) DA(F14):DT(D8) DC(F15):DG(D7) DA(F16):DT(D6) DA(F17):DT(D5) DT(F18):DA(D4) DT(F19):DA(D3) DA(F20):DT(D2) DT(F21):DA(D1) chainA ( 26) ASN184 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS186 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) THR187 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) THR188 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 26) ASN184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 28) LYS186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 ( 29) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 30) THR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln/atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln >1ku7_A:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF THERMUS AQUATICS RNA POLYMERASE SIGMAA SUBUNIT REGION 4 BOUND TO-35 ELEMENT DNA organism=Thermus aquaticus DNA sequence DC(C14):DG(B11) DT(C15):DA(B10) DT(C16):DA(B9) DT(C17):DA(B8) DG(C18):DC(B7) DT(C19):DA(B6) DC(C20):DG(B5) DA(C21):DT(B4) DA(C22):DT(B3) DG(C23):DC(B2) chainA ( 33) LEU398 0 0 0 0 1 0 0 0 0 0 ( 43) THR408 0 0 0 0 0 0 0 3 3 0 ( 44) ARG409 0 0 0 9 16 6 0 0 0 0 ( 45) GLU410 0 0 0 0 0 3 11 9 3 0 ( 46) ARG411 0 0 0 0 0 0 0 0 3 7 ( 48) ARG413 0 0 0 0 0 4 4 0 0 0 ( 49) GLN414 0 0 0 0 0 0 0 0 9 6 prot.sequence seelekalsklsereamvlkmrkglidgrehtLeevgayfgvTRERiRQienkalrklkyhesrtrklrdfle >1kx3_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE, NCP146, AT 2.0 A RESOLUTION organism=XENOPUS LAEVIS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DT(J-53):DA(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DA(J52):DT(I-52) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 17) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1kx3_C:Histone-fold; title=X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE, NCP146, AT 2.0 A RESOLUTION organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-52):DA(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DT(I2):DA(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DA(I53):DT(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainC prot.sequence aktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt >1kx4_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE, NCP146B, AT 2.6 A RESOLUTION organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DT(I-69):DA(J69) DC(I-68):DG(J68) DC(I-67):DG(J67) DA(I-66):DT(J66) DA(I-65):DT(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DC(I-60):DG(J60) DC(I-59):DG(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DT(I-56):DA(J56) DG(I-55):DC(J55) DC(I-54):DG(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DA(I-51):DT(J51) DT(I-50):DA(J50) DC(I-49):DG(J49) DG(I-48):DC(J48) DT(I-47):DA(J47) DA(I-46):DT(J46) DG(I-45):DC(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DA(I-42):DT(J42) DA(I-40):DT(J40) DG(I-39):DC(J39) DT(I-38):DA(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DT(I-34):DA(J34) DC(I-33):DG(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DG(I-25):DC(J25) DC(I-24):DG(J24) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DA(I-11):DT(J11) DC(I-10):DG(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DT(I2):DA(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DT(I6):DA(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DC(I17):DG(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DC(I26):DG(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DG(I34):DC(J-34) DA(I35):DT(J-35) DC(I36):DG(J-36) DA(I37):DT(J-37) DC(I38):DG(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DT(I41):DA(J-41) DT(I42):DA(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DC(I46):DG(J-46) DT(I47):DA(J-47) DA(I48):DT(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DT(I52):DA(J-52) DC(I53):DG(J-53) DC(I54):DG(J-54) DG(I55):DC(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I59):DC(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DA(I62):DT(J-62) DT(I63):DA(J-63) DA(I64):DT(J-64) DT(I65):DA(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DG(I68):DC(J-68) DG(I69):DC(J-69) DA(I70):DT(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/kvLRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllRkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/kkRrktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1kx4_G:Histone-fold; title=X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE, NCP146B, AT 2.6 A RESOLUTION organism=? DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DT(J-70):DA(I70) DC(J-69):DG(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DA(J-65):DT(I65) DT(J-64):DA(I64) DA(J-63):DT(I63) DT(J-62):DA(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DC(J-59):DG(I59) DT(J-57):DA(I57) DG(J-56):DC(I56) DC(J-55):DG(I55) DG(J-54):DC(I54) DG(J-53):DC(I53) DA(J-52):DT(I52) DC(J-50):DG(I50) DG(J-49):DC(I49) DT(J-48):DA(I48) DA(J-47):DT(I47) DG(J-46):DC(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DA(J-42):DT(I42) DA(J-41):DT(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DG(J-38):DC(I38) DT(J-37):DA(I37) DG(J-36):DC(I36) DT(J-35):DA(I35) DC(J-34):DG(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DG(J-26):DC(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DG(J-17):DC(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DA(J-6):DT(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DG(J10):DC(I-10) DT(J11):DA(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J24):DC(I-24) DC(J25):DG(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DG(J33):DC(I-33) DA(J34):DT(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DA(J38):DT(I-38) DC(J39):DG(I-39) DT(J40):DA(I-40) DT(J42):DA(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DC(J45):DG(I-45) DT(J46):DA(I-46) DA(J47):DT(I-47) DC(J48):DG(I-48) DG(J49):DC(I-49) DA(J50):DT(I-50) DT(J51):DA(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DG(J54):DC(I-54) DC(J55):DG(I-55) DA(J56):DT(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DG(J59):DC(I-59) DG(J60):DC(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DT(J65):DA(I-65) DT(J66):DA(I-66) DG(J67):DC(I-67) DG(J68):DC(I-68) DA(J69):DT(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >1kx5_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE, NCP147, AT 1.9 A RESOLUTION organism=XENOPUS LAEVIS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 40) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 17) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) LYS128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 9) LYS9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 39) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 40) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 1) SER1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 5) LYS5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 27) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence artkqtarkstggkaprkqlatkaarksapatggvkkpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/sgrgkggkglgkggakRhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/sgrgkqggktrakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkktessksksK/aksapapkKgskkavtktqkkdgKkRRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/artkqtarkstggkaprkqlatkaarksapatggvkkpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/SgrgkggkglgkggakrhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/sgrgKqggktraKaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkktessksksk/aksapapkkgskkavtktqkkdgkkrRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1kx5_G:Histone-fold; title=X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE, NCP147, AT 1.9 A RESOLUTION organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainG ( 5) LYS5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgrgKqggktraKaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkktessksksk >1l1m_AB:lambda_repressor-like_DNA-binding_domains; title=SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1 organism=ESCHERICHIA COLI DNA sequence DG(C1):DC(D23) DA(C2):DT(D22) DA(C3):DT(D21) DT(C4):DA(D20) DT(C5):DA(D19) DG(C6):DC(D18) DT(C7):DA(D17) DG(C8):DC(D16) DA(C9):DT(D15) DG(C10):DC(D14) DC(C11):DG(D13) DG(C12):DC(D12) DG(C13):DC(D11) DA(C14):DT(D10) DT(C15):DA(D9) DA(C16):DT(D8) DA(C17):DT(D7) DC(C18):DG(D6) DA(C19):DT(D5) DA(C20):DT(D4) DT(C21):DA(D3) DT(C22):DA(D2) DT(C23):DA(D1) chainA ( 6) LEU6 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) TYR7 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 5 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 3 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 4 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) HIS29 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 7) TYR7 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 0 14 14 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 20 31 0 0 0 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 3 0 0 0 0 ( 29) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 22 8 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 prot.sequence mkpvtLYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl/mkpvtlYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl >1l1m_B:lambda_repressor-like_DNA-binding_domains; title=SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1 organism=ESCHERICHIA COLI DNA sequence DG(C1):DC(D23) DA(C2):DT(D22) DA(C3):DT(D21) DT(C4):DA(D20) DT(C5):DA(D19) DG(C6):DC(D18) DT(C7):DA(D17) DG(C8):DC(D16) DA(C9):DT(D15) DG(C10):DC(D14) DC(C11):DG(D13) DG(C12):DC(D12) DG(C13):DC(D11) DA(C14):DT(D10) DT(C15):DA(D9) DA(C16):DT(D8) DA(C17):DT(D7) DC(C18):DG(D6) DA(C19):DT(D5) DA(C20):DT(D4) DT(C21):DA(D3) DT(C22):DA(D2) DT(C23):DA(D1) chainB ( 7) TYR7 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 0 14 14 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 20 31 0 0 0 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 3 0 0 0 0 ( 29) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 22 8 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 prot.sequence mkpvtlYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl >1l1t_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM (FPG) BOUND TO ABASIC-SITE CONTAINING DNA organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DG(C13):DC(B12) DT(C14):DA(B11) DC(C15):DG(B10) DC(C16):DG(B9) DA(C17):DT(B8) HPD(C18):DC(B7) DG(C19):DC(B6) DT(C20):DA(B5) DC(C21):DG(B4) DT(C22):DA(B3) DA(C23):DT(B2) DC(C24):DG(B1) chainA ( 75) ARG76 0 0 0 0 0 0 7 3 0 0 0 0 ( 76) MET77 0 0 0 0 0 0 10 0 0 0 0 0 (111) ARG112 0 0 0 0 64 14 0 0 0 0 0 0 (113) PHE114 0 0 0 0 0 10 37 0 0 0 0 0 (249) ARG264 0 0 0 0 0 0 3 2 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMEgryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldqtvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkggsfqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >1l1z_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM (FPG) COVALENT-DNA INTERMEDIATE organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DG(B1):DC(C24) DT(B2):DA(C23) DA(B3):DT(C22) DG(B4):DC(C21) DA(B5):DT(C20) DC(B6):DG(C19) DC(B7):PED(C18) DT(B8):DA(C17) DG(B9):DC(C16) DG(B10):DC(C15) DA(B11):DT(C14) DC(B12):DG(C13) chainA ( 75) ARG76 0 0 0 0 1 8 0 0 0 0 0 0 ( 76) MET77 0 0 0 0 0 18 0 0 0 0 0 0 (111) ARG112 0 0 0 0 0 0 15 31 0 0 0 0 (113) PHE114 0 0 0 0 0 72 9 0 0 0 0 0 (253) ARG264 0 0 0 0 2 6 0 0 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMEgryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldqtvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkggstvgtfqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >1l2b_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM (FPG) DNA END-PRODUCT STRUCTURE organism=? DNA sequence DG(B1):DC(D24) DT(B2):DA(D23) DA(B3):DT(D22) DG(B4):DC(D21) DA(B5):DT(D20) DC(B6):DG(D19) chainA ( 75) ARG76 0 0 0 0 1 4 ( 76) MET77 0 0 0 0 0 9 (111) ARG112 0 0 0 0 0 2 (113) PHE114 0 0 0 0 0 40 (254) ARG264 0 0 0 0 4 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldqtvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkggstvrgtfqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >1l2c_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM (FPG)-DNA ESTRANGED THYMINE MISMATCH RECOGNITION COMPLEX organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DG(B1):DC(C24) DT(B2):DA(C23) DA(B3):DT(C22) DG(B4):DC(C21) DA(B5):DT(C20) DC(B6):DG(C19) DT(B7):HPD(C18) DT(B8):DA(C17) DG(B9):DC(C16) DG(B10):DC(C15) DA(B11):DT(C14) DC(B12):DG(C13) chainA ( 75) ARG76 0 0 0 0 1 12 0 0 0 0 0 0 ( 76) MET77 0 0 0 0 0 22 0 0 0 0 0 0 ( 77) GLU78 0 0 0 0 0 0 0 1 0 0 0 0 (110) VAL111 0 0 0 0 0 0 0 1 0 0 0 0 (111) ARG112 0 0 0 0 0 0 9 38 0 0 0 0 (113) PHE114 0 0 0 0 0 68 8 0 0 0 0 0 (249) ARG264 0 0 0 0 0 6 0 0 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMEgryavasaleplephthvvfcftdgselryrdVRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldqtvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkggsfqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >1l2d_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM (FPG)-DNA ESTRANGED GUANINE MISMATCH RECOGNITION COMPLEX organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DG(C13):DC(B12) DT(C14):DA(B11) DC(C15):DG(B10) DC(C16):DG(B9) DA(C17):DT(B8) HPD(C18):DG(B7) DG(C19):DC(B6) DT(C20):DA(B5) DC(C21):DG(B4) DT(C22):DA(B3) DC(C24):DG(B1) chainA ( 75) ARG76 0 0 0 0 0 0 7 1 0 0 0 ( 76) MET77 0 0 0 0 0 0 11 0 0 0 0 (111) ARG112 0 0 0 0 72 16 0 0 0 0 0 (113) PHE114 0 0 0 0 0 15 32 0 0 0 0 (249) ARG264 0 0 0 0 0 0 4 1 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldqtvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkggsfqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >1l3l_A:Pheromone-binding_domain_of_LuxR-like_quorum-sensing_transcription_factors;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF A BACTERIAL QUORUM-SENSING TRANSCRIPTION FACTOR COMPLEXED WITH PHEROMONE AND DNA organism=Agrobacterium tumefaciens DNA sequence DG(H101):DC(F120) DA(H102):DT(F119) DT(H103):DA(F118) DG(H104):DC(F117) DT(H105):DA(F116) DG(H106):DC(F115) DC(H107):DG(F114) DA(H108):DT(F113) DG(H109):DC(F112) DA(H110):DT(F111) DT(H111):DA(F110) DC(H112):DG(F109) DT(H113):DA(F108) DG(H114):DC(F107) DC(H115):DG(F106) DA(H116):DT(F105) DC(H117):DG(F104) DA(H118):DT(F103) DT(H119):DA(F102) DC(H120):DG(F101) chainA (190) MET191 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (201) TYR202 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (202) ASN203 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) ARG206 0 0 0 0 9 12 6 1 0 0 0 0 0 0 0 0 0 0 0 0 (206) VAL207 0 0 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG210 0 0 0 5 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) GLU211 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qhwldkltdlaaiegdecilktgladiadhfgftgyaylhiqhrhitavtnyhrqwqstyfdkkfealdpvvkrarsrkhiftwsgeherptlskderafydhasdfgirsgitipiktangfmsmftmasdkpvidldreidavaaaatigqiharisflrttptaedaawldpkeatylrwiavgktMeeiadvegvkYNsvRVklREamkrfdvrskahltalairrkli >1l3l_AC:Pheromone-binding_domain_of_LuxR-like_quorum-sensing_transcription_factors;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF A BACTERIAL QUORUM-SENSING TRANSCRIPTION FACTOR COMPLEXED WITH PHEROMONE AND DNA organism=Agrobacterium tumefaciens DNA sequence DG(H101):DC(F120) DA(H102):DT(F119) DT(H103):DA(F118) DG(H104):DC(F117) DT(H105):DA(F116) DG(H106):DC(F115) DC(H107):DG(F114) DA(H108):DT(F113) DG(H109):DC(F112) DA(H110):DT(F111) DT(H111):DA(F110) DC(H112):DG(F109) DT(H113):DA(F108) DG(H114):DC(F107) DC(H115):DG(F106) DA(H116):DT(F105) DC(H117):DG(F104) DA(H118):DT(F103) DT(H119):DA(F102) DC(H120):DG(F101) chainA (190) MET191 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (201) TYR202 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (202) ASN203 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) ARG206 0 0 0 0 9 12 6 1 0 0 0 0 0 0 0 0 0 0 0 0 (206) VAL207 0 0 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG210 0 0 0 5 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) GLU211 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (182) MET191 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (193) TYR202 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (194) ASN203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (197) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 1 7 13 8 0 0 0 0 (198) VAL207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 (201) ARG210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 4 0 0 0 prot.sequence qhwldkltdlaaiegdecilktgladiadhfgftgyaylhiqhrhitavtnyhrqwqstyfdkkfealdpvvkrarsrkhiftwsgeherptlskderafydhasdfgirsgitipiktangfmsmftmasdkpvidldreidavaaaatigqiharisflrttptaedaawldpkeatylrwiavgktMeeiadvegvkYNsvRVklREamkrfdvrskahltalairrkli/mqhwldkltdlaaiegdecilktgladiadhfgftgyaylhiqhrhitavtnyhrqwqstyfdkkfealdpvvkrarsrkhiftwsgeherptlskderafydhasdfgirsgitipiktangfmsmftmasdkpvidldreidavaaaatigqiharisflawldpkeatylrwiavgktMeeiadvegvkYNsvRVklReamkrfdvrskahltalairrkli >1l3l_BD:Pheromone-binding_domain_of_LuxR-like_quorum-sensing_transcription_factors;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF A BACTERIAL QUORUM-SENSING TRANSCRIPTION FACTOR COMPLEXED WITH PHEROMONE AND DNA organism=Agrobacterium tumefaciens DNA sequence DG(E1):DC(G20) DA(E2):DT(G19) DT(E3):DA(G18) DG(E4):DC(G17) DT(E5):DA(G16) DG(E6):DC(G15) DC(E7):DG(G14) DA(E8):DT(G13) DG(E9):DC(G12) DA(E10):DT(G11) DT(E11):DA(G10) DC(E12):DG(G9) DT(E13):DA(G8) DG(E14):DC(G7) DC(E15):DG(G6) DA(E16):DT(G5) DC(E17):DG(G4) DA(E18):DT(G3) DT(E19):DA(G2) DC(E20):DG(G1) chainB (190) MET191 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (201) TYR202 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (202) ASN203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (205) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 1 6 10 10 0 0 0 0 (206) VAL207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 3 0 0 (209) ARG210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 5 0 0 0 (210) GLU211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 chainD (182) MET191 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (193) TYR202 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (194) ASN203 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ARG206 0 0 0 0 9 11 6 2 0 0 0 0 0 0 0 0 0 0 0 0 (198) VAL207 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) ARG210 0 0 0 4 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qhwldkltdlaaiegdecilktgladiadhfgftgyaylhiqhrhitavtnyhrqwqstyfdkkfealdpvvkrarsrkhiftwsgeherptlskderafydhasdfgirsgitipiktangfmsmftmasdkpvidldreidavaaaatigqiharisflrttptaedaawldpkeatylrwiavgktMeeiadvegvkYNsvRVklREamkrfdvrskahltalairrkli/mqhwldkltdlaaiegdecilktgladiadhfgftgyaylhiqhrhitavtnyhrqwqstyfdkkfealdpvvkrarsrkhiftwsgeherptlskderafydhasdfgirsgitipiktangfmsmftmasdkpvidldreidavaaaatigqiharisflawldpkeatylrwiavgktMeeiadvegvkYNsvRVklReamkrfdvrskahltalairrkli >1l3s_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNA. organism=Geobacillus stearothermophilus DNA sequence DC(C6):DG(B29) DG(C7):DC(B28) DT(C8):DA(B27) DG(C9):DC(B26) DA(C10):DT(B25) DT(C11):DA(B24) DC(C12):DG(B23) DG(C13):DC(B22) DC(C14):DG(B21) chainA (286) LYS582 0 0 0 5 3 0 0 0 0 (291) TYR587 0 0 1 0 0 0 0 0 0 (319) ARG615 11 3 0 0 0 0 0 0 0 (329) ASN625 0 1 6 2 0 0 0 0 0 (333) ARG629 4 7 0 0 0 0 0 0 0 (418) TYR714 46 0 0 0 0 0 0 0 0 (501) GLN797 4 0 0 0 0 0 0 0 0 (533) HIS829 0 1 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1l3t_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 10 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF A SINGLE DTTP RESIDUE organism=Geobacillus stearothermophilus DNA sequence DG(B20):DC(C13) DC(B21):DG(C12) DG(B22):DC(C11) DA(B23):DT(C10) DT(B24):DA(C9) DC(B25):DG(C8) DA(B26):DT(C7) DC(B27):DG(C6) DG(B28):DC(C5) DT(B29):DA(C4) chainA (286) LYS582 0 0 0 0 0 3 5 0 0 0 (291) TYR587 0 0 0 0 0 0 0 1 0 0 (319) ARG615 0 0 0 0 0 0 0 0 3 7 (326) ASN622 0 0 0 0 0 0 0 1 0 0 (329) ASN625 0 0 0 0 0 0 1 7 1 0 (418) TYR714 0 0 0 0 0 0 0 0 0 46 (501) GLN797 0 0 0 0 0 0 0 0 0 2 (533) HIS829 0 0 0 0 0 0 0 0 1 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1l3u_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 11 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF A DTTP AND A DATP RESIDUE. organism=Geobacillus stearothermophilus DNA sequence DT(C4):DA(B29) DA(C5):DT(B28) DC(C6):DG(B27) DG(C7):DC(B26) DT(C8):DA(B25) DG(C9):DC(B24) DA(C10):DT(B23) DT(C11):DA(B22) DC(C12):DG(B21) DG(C13):DC(B20) DC(C14):DG(B19) chainA (286) LYS582 0 0 0 5 3 0 0 0 0 0 0 (291) TYR587 0 0 1 0 0 0 0 0 0 0 0 (319) ARG615 8 2 0 0 0 0 0 0 0 0 0 (326) ASN622 0 0 1 0 0 0 0 0 0 0 0 (329) ASN625 0 1 11 2 0 0 0 0 0 0 0 (333) ARG629 4 9 0 0 0 0 0 0 0 0 0 (418) TYR714 49 0 0 0 0 0 0 0 0 0 0 (501) GLN797 3 0 0 0 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1l3v_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 15 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF DTTP, DATP, DCTP, AND DGTP RESIDUES. organism=Geobacillus stearothermophilus DNA sequence DG(B20):DC(C18) DC(B21):DG(C17) DG(B22):DC(C16) DA(B23):DT(C15) DT(B24):DA(C14) DC(B25):DG(C13) DA(B26):DT(C12) DC(B27):DG(C11) DG(B28):DC(C10) DT(B29):DA(C9) DA(B30):DT(C8) DC(B31):DG(C7) DG(B32):DC(C6) DT(B33):DA(C5) DC(B34):DG(C4) chainA (286) LYS582 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 (291) TYR587 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (319) ARG615 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 (326) ASN622 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (329) ASN625 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 (418) TYR714 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 (501) GLN797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1l5u_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 12 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF A DTTP, A DATP, AND A DCTP RESIDUE. organism=Geobacillus stearothermophilus DNA sequence DG(B18):DC(C15) DC(B19):DG(C14) DG(B20):DC(C13) DA(B21):DT(C12) DT(B22):DA(C11) DC(B23):DG(C10) DA(B24):DT(C9) DC(B25):DG(C8) DG(B26):DC(C7) DT(B27):DA(C6) DA(B28):DT(C5) DC(B29):DG(C4) chainA (286) LYS582 0 0 0 0 0 0 0 3 6 0 0 0 (291) TYR587 0 0 0 0 0 0 0 0 0 1 0 0 (319) ARG615 0 0 0 0 0 0 0 0 0 0 2 9 (329) ASN625 0 0 0 0 0 0 0 0 2 4 1 0 (418) TYR714 0 0 0 0 0 0 0 0 0 0 0 54 (501) GLN797 0 0 0 0 0 0 0 0 0 0 0 4 (533) HIS829 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1lat_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR MUTANT/DNA COMPLEX organism=Rattus norvegicus DNA sequence DT(D2):DA(C19) DC(D3):DG(C18) DC(D4):DG(C17) DA(D5):DT(C16) DG(D6):DC(C15) DA(D7):DT(C14) DA(D8):DT(C13) DC(D9):DG(C12) DA(D10):DT(C11) DT(D11):DA(C10) DG(D12):DC(C9) DT(D13):DA(C8) DT(D14):DA(C7) DC(D15):DG(C6) DT(D16):DA(C5) DG(D17):DC(C4) DG(D18):DC(C3) DA(D19):DT(C2) chainA ( 21) GLU458 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 ( 24) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 1 9 6 0 0 0 ( 25) ALA462 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 29) ARG466 0 0 0 0 0 0 0 0 0 22 13 0 0 0 0 0 0 0 prot.sequence rpclvcsdeasgchygvltcEgcKAffkRavegqhnylckyegkciidkirrkncpacryrkclqagmnle >1lat_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR MUTANT/DNA COMPLEX organism=Rattus norvegicus DNA sequence DT(C2):DA(D19) DC(C3):DG(D18) DC(C4):DG(D17) DA(C5):DT(D16) DG(C6):DC(D15) DA(C7):DT(D14) DA(C8):DT(D13) DC(C9):DG(D12) DA(C10):DT(D11) DT(C11):DA(D10) DG(C12):DC(D9) DT(C13):DA(D8) DT(C14):DA(D7) DC(C15):DG(D6) DT(C16):DA(D5) DG(C17):DC(D4) DG(C18):DC(D3) DA(C19):DT(D2) chainA ( 21) GLU458 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS461 0 0 0 6 9 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ALA462 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 29) ARG466 0 0 0 0 0 0 0 13 22 0 0 0 0 0 0 0 0 0 chainB ( 22) GLU458 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 1 9 5 0 0 0 ( 26) ALA462 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 18 11 0 0 0 0 0 0 0 ( 74) ARG510 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 prot.sequence rpclvcsdeasgchygvltcEgcKAffkRavegqhnylckyegkciidkirrkncpacryrkclqagmnle/arpclvcsdeasgchygvltcEgcKAffkRavegqhnylckyegkciidkirrkncpacryrkclqagmnleaR >1lb2_ABE:C-terminal_domain_of_RNA_polymerase_alpha_subunit;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE E. COLI ALPHA C-TERMINAL DOMAIN OF RNA POLYMERASE IN COMPLEX WITH CAP AND DNA organism=ESCHERICHIA COLI DNA sequence DA(J14):DT(K14) DT(J15):DA(K15) DC(J16):DG(K16) DA(J17):DT(K17) DC(J18):DG(K18) DA(J19):DT(K19) DT(J20):DA(K20) DT(J21):DA(K21) DT(J22):DA(K22) DT(J23):DA(K23) DA(J24):DT(K24) DG(J25):DC(K25) DG(J26):DC(K26) DA(J27):DT(K27) DA(J28):DT(K28) DA(J29):DT(K29) DA(J30):DT(K30) DA(J31):DT(K31) DA(J32):DT(K32) DG(J33):DC(K33) chainA (162) GLN170 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) SER179 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG180 0 0 0 2 9 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLU181 0 6 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR182 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG185 1 10 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 chainE ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 prot.sequence ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcSRETvgRilkmledqnlisahgktivvygtr/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenw/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslg >1lb2_B:C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=STRUCTURE OF THE E. COLI ALPHA C-TERMINAL DOMAIN OF RNA POLYMERASE IN COMPLEX WITH CAP AND DNA organism=ESCHERICHIA COLI DNA sequence DC(K33):DG(J33) DT(K32):DA(J32) DT(K31):DA(J31) DT(K30):DA(J30) DT(K29):DA(J29) DT(K28):DA(J28) DT(K27):DA(J27) DC(K26):DG(J26) DC(K25):DG(J25) DT(K24):DA(J24) DA(K23):DT(J23) DA(K22):DT(J22) DA(K21):DT(J21) DA(K20):DT(J20) DT(K19):DA(J19) DG(K18):DC(J18) DT(K17):DA(J17) DG(K16):DC(J16) DA(K15):DT(J15) DT(K14):DA(J14) chainB ( 16) ARG265 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenw >1lcc_A:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF THE COMPLEX OF LAC REPRESSOR HEADPIECE AND AN 11 BASE- PAIR HALF-OPERATOR DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS organism=ESCHERICHIA COLI DNA sequence DC(C1):DG(B11) DG(C2):DC(B10) DC(C3):DG(B9) DT(C4):DA(B8) DC(C5):DG(B7) DA(C6):DT(B6) DC(C7):DG(B5) DA(C8):DT(B4) DA(C9):DT(B3) DT(C10):DA(B2) DT(C11):DA(B1) chainA ( 17) TYR17 0 0 9 8 0 2 0 0 0 0 0 ( 18) GLN18 0 0 0 9 10 14 4 0 0 0 0 ( 19) THR19 0 0 0 0 0 0 0 1 0 0 0 ( 21) SER21 0 0 0 4 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 4 8 9 5 0 0 0 ( 26) GLN26 0 0 0 0 11 6 0 0 0 0 0 ( 29) HIS29 0 0 0 0 0 0 0 1 11 0 0 prot.sequence mkpvtlYdvaeyagvsYQTvSRvvnQasHvsaktrekveaamaelnyipNr >1lcd_A:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF THE COMPLEX OF LAC REPRESSOR HEADPIECE AND AN 11 BASE- PAIR HALF-OPERATOR DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS organism=ESCHERICHIA COLI DNA sequence DA(B1):DT(C11) DA(B2):DT(C10) DT(B3):DA(C9) DT(B4):DA(C8) DG(B5):DC(C7) DT(B6):DA(C6) DG(B7):DC(C5) DA(B8):DT(C4) DG(B9):DC(C3) DC(B10):DG(C2) DG(B11):DC(C1) chainA ( 17) TYR17 0 0 0 0 0 0 0 7 7 0 0 ( 18) GLN18 0 0 0 0 3 4 9 12 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 4 0 0 0 ( 22) ARG22 0 0 0 1 7 9 8 0 0 0 0 ( 26) GLN26 0 0 0 0 0 8 8 0 0 0 0 ( 29) HIS29 0 0 10 1 0 0 0 0 0 0 0 prot.sequence mkpvtlydvaeyagvsYQtvSRvvnQasHvsaktrekveaamaelnyipnr >1le5_A:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO AN IFNB-KB organism=MUS MUSCULUS DNA sequence DA(D14):DT(C12) DG(D15):DC(C11) DG(D16):DC(C10) DA(D17):DT(C9) DA(D18):DT(C8) DT(D19):DA(C7) DT(D20):DA(C6) DT(D21):DA(C5) DC(D22):DG(C4) DC(D23):DG(C3) DC(D24):DG(C2) chainA ( 16) ARG33 0 12 12 0 0 0 0 0 0 0 0 ( 18) ARG35 0 1 4 5 0 0 0 0 0 0 0 ( 19) TYR36 0 0 0 4 3 0 0 0 0 0 0 ( 21) CYS38 0 0 0 2 0 0 0 0 0 0 0 ( 22) GLU39 0 0 11 25 0 0 0 0 0 0 0 ( 26) ALA43 1 0 0 0 0 0 0 0 0 0 0 (170) ARG187 0 0 1 7 7 0 0 0 0 0 0 prot.sequence mayveiieqpkqrgmRfRYkCEgrsAgsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd >1le5_AB:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO AN IFNB-KB organism=MUS MUSCULUS DNA sequence DA(D14):DT(C12) DG(D15):DC(C11) DG(D16):DC(C10) DA(D17):DT(C9) DA(D18):DT(C8) DT(D19):DA(C7) DT(D20):DA(C6) DT(D21):DA(C5) DC(D22):DG(C4) DC(D23):DG(C3) DC(D24):DG(C2) chainA ( 16) ARG33 0 12 12 0 0 0 0 0 0 0 0 ( 18) ARG35 0 1 4 5 0 0 0 0 0 0 0 ( 19) TYR36 0 0 0 4 3 0 0 0 0 0 0 ( 21) CYS38 0 0 0 2 0 0 0 0 0 0 0 ( 22) GLU39 0 0 11 25 0 0 0 0 0 0 0 ( 26) ALA43 1 0 0 0 0 0 0 0 0 0 0 (170) ARG187 0 0 1 7 7 0 0 0 0 0 0 chainB ( 17) ARG54 0 0 0 0 0 0 2 13 7 3 0 ( 20) TYR57 0 0 0 0 0 0 12 4 0 0 0 ( 23) GLU60 0 0 0 0 0 0 0 13 5 0 0 ( 27) HIS64 0 0 0 0 0 0 0 0 0 11 13 (204) LYS241 0 0 0 0 0 4 8 2 0 0 0 (206) PRO243 0 0 0 0 0 2 0 0 0 0 0 (235) LYS272 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mayveiieqpkqrgmRfRYkCEgrsAgsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/mgpylqileqpkqrgfRfrYvcEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKaPnasnlkivrmdrtagcvtggeeiyllcdKvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >1le5_EF:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO AN IFNB-KB organism=MUS MUSCULUS DNA sequence DA(H14):DT(G12) DG(H15):DC(G11) DG(H16):DC(G10) DA(H17):DT(G9) DA(H18):DT(G8) DT(H19):DA(G7) DT(H20):DA(G6) DT(H21):DA(G5) DC(H22):DG(G4) DC(H23):DG(G3) DC(H24):DG(G2) chainE ( 16) ARG33 0 14 10 0 0 0 0 0 0 0 0 ( 18) ARG35 5 9 2 0 0 0 0 0 0 0 0 ( 19) TYR36 0 0 0 4 5 0 0 0 0 0 0 ( 21) CYS38 0 0 0 1 0 0 0 0 0 0 0 ( 22) GLU39 0 0 5 8 0 0 0 0 0 0 0 (170) ARG187 0 0 2 12 4 0 0 0 0 0 0 (229) ARG246 0 0 0 0 0 0 0 3 0 0 0 chainF ( 17) ARG54 0 0 0 0 0 0 0 2 13 6 0 ( 19) ARG56 0 0 0 0 0 0 0 0 2 13 5 ( 20) TYR57 0 0 0 0 0 0 7 6 0 0 0 ( 22) CYS59 0 0 0 0 0 0 0 3 0 0 0 ( 23) GLU60 0 0 0 0 0 0 0 14 6 1 0 ( 27) HIS64 0 0 0 0 0 0 0 0 0 3 16 (204) LYS241 0 0 0 0 0 0 3 3 0 0 0 (235) LYS272 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mayveiieqpkqrgmRfRYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhRqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/mgpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdKvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >1le8_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE MATA1/MATALPHA2-3A HETERODIMER BOUND TO DNA COMPLEX organism=? DNA sequence DT(D24):DA(C21) DG(D25):DC(C20) DA(D26):DT(C19) DT(D27):DA(C18) DG(D28):DC(C17) DT(D29):DA(C16) DA(D30):DT(C15) DA(D31):DT(C14) DA(D32):DT(C13) DT(D33):DA(C12) DT(D34):DA(C11) DT(D35):DA(C10) DT(D36):DA(C9) DT(D37):DA(C8) DA(D38):DT(C7) DC(D39):DG(C6) DA(D40):DT(C5) DT(D41):DA(C4) DG(D42):DC(C3) chainA ( 42) ARG115 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 ( 43) VAL116 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ILE119 0 0 0 0 3 6 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN120 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) MET123 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG124 11 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kssispqarafleqvfrrkqslnskekeevakkcgitplqvRVwfINkrMRsk >1le8_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE MATA1/MATALPHA2-3A HETERODIMER BOUND TO DNA COMPLEX organism=Saccharomyces cerevisiae DNA sequence DT(D24):DA(C21) DG(D25):DC(C20) DA(D26):DT(C19) DT(D27):DA(C18) DG(D28):DC(C17) DT(D29):DA(C16) DA(D30):DT(C15) DA(D31):DT(C14) DA(D32):DT(C13) DT(D33):DA(C12) DT(D34):DA(C11) DT(D35):DA(C10) DT(D36):DA(C9) DT(D37):DA(C8) DA(D38):DT(C7) DC(D39):DG(C6) DA(D40):DT(C5) DT(D41):DA(C4) DG(D42):DC(C3) chainA ( 42) ARG115 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 ( 43) VAL116 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ILE119 0 0 0 0 3 6 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN120 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) MET123 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG124 11 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 3) HIS134 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 ( 4) ARG135 0 0 0 0 0 0 0 0 0 0 4 2 1 0 0 0 0 0 0 ( 47) ASN178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 1 0 0 ( 50) ALA181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 51) ALA182 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 54) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence kssispqarafleqvfrrkqslnskekeevakkcgitplqvRVwfINkrMRsk/rgHRftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvAArrAkektitiapeladllsgepl >1le8_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE MATA1/MATALPHA2-3A HETERODIMER BOUND TO DNA COMPLEX organism=Saccharomyces cerevisiae DNA sequence DT(D24):DA(C21) DG(D25):DC(C20) DA(D26):DT(C19) DT(D27):DA(C18) DG(D28):DC(C17) DT(D29):DA(C16) DA(D30):DT(C15) DA(D31):DT(C14) DA(D32):DT(C13) DT(D33):DA(C12) DT(D34):DA(C11) DT(D35):DA(C10) DT(D36):DA(C9) DT(D37):DA(C8) DA(D38):DT(C7) DC(D39):DG(C6) DA(D40):DT(C5) DT(D41):DA(C4) DG(D42):DC(C3) chainB ( 3) HIS134 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 ( 4) ARG135 0 0 0 0 0 0 0 0 0 0 4 2 1 0 0 0 0 0 0 ( 47) ASN178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 1 0 0 ( 50) ALA181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 51) ALA182 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 54) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence rgHRftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvAArrAkektitiapeladllsgepl >1le9_A:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO THE IG/HIV-KB SITI organism=? DNA sequence DT(C701):DC(D724) DG(C703):DC(D723) DG(C704):DC(D722) DA(C705):DT(D721) DC(C706):DG(D720) DT(C707):DA(D719) DT(C708):DA(D718) DT(C709):DA(D717) DC(C710):DG(D716) DC(C711):DG(D715) DT(C712):DA(D714) chainA ( 15) ARG33 0 0 0 0 0 0 0 0 9 11 0 ( 17) ARG35 0 0 0 0 0 0 0 0 1 8 7 ( 18) TYR36 0 0 0 0 0 0 4 6 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 1 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 7 6 0 0 ( 25) ALA43 0 0 0 0 0 0 0 0 0 0 1 (169) ARG187 0 0 0 0 0 0 1 9 1 0 0 prot.sequence ayveiieqpkqrgmRfRYkCEgrsAgsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd >1le9_AB:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO THE IG/HIV-KB SITI organism=MUS MUSCULUS DNA sequence DA(D714):DT(C712) DG(D715):DC(C711) DG(D716):DC(C710) DA(D717):DT(C709) DA(D718):DT(C708) DA(D719):DT(C707) DG(D720):DC(C706) DT(D721):DA(C705) DC(D722):DG(C704) DC(D723):DG(C703) DC(D724):DT(C701) chainA ( 15) ARG33 0 11 9 0 0 0 0 0 0 0 0 ( 17) ARG35 7 8 1 0 0 0 0 0 0 0 0 ( 18) TYR36 0 0 0 6 4 0 0 0 0 0 0 ( 20) CYS38 0 0 0 1 0 0 0 0 0 0 0 ( 21) GLU39 0 0 6 7 0 0 0 0 0 0 0 ( 25) ALA43 1 0 0 0 0 0 0 0 0 0 0 (169) ARG187 0 0 1 9 1 0 0 0 0 0 0 chainB ( 16) ARG54 0 0 0 0 0 0 0 1 6 10 0 ( 18) ARG56 0 0 0 0 0 0 0 0 0 15 0 ( 19) TYR57 0 0 0 0 0 0 3 3 0 0 0 ( 21) CYS59 0 0 0 0 0 0 0 1 0 0 0 ( 22) GLU60 0 0 0 0 0 0 0 7 4 2 0 ( 26) HIS64 0 0 0 0 0 0 0 0 0 6 1 (203) LYS241 0 0 0 0 0 5 8 2 0 0 0 prot.sequence ayveiieqpkqrgmRfRYkCEgrsAgsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/gpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >1le9_EF:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO THE IG/HIV-KB SITI organism=MUS MUSCULUS DNA sequence DG(G803):DC(H823) DG(G804):DC(H822) DA(G805):DT(H821) DC(G806):DG(H820) DT(G807):DA(H819) DT(G808):DA(H818) DT(G809):DG(H816) DC(G810):DG(H815) chainE ( 15) ARG33 0 0 0 0 0 0 0 5 ( 17) ARG35 0 0 0 0 0 0 0 1 ( 18) TYR36 0 0 0 0 0 7 4 0 ( 20) CYS38 0 0 0 0 0 0 4 0 ( 21) GLU39 0 0 0 0 0 0 13 10 (169) ARG187 0 0 0 0 0 13 3 1 chainF ( 16) ARG54 0 16 9 0 0 0 0 0 ( 18) ARG56 0 8 0 0 0 0 0 0 ( 19) TYR57 0 0 0 5 0 0 0 0 ( 22) GLU60 0 24 2 0 0 0 0 0 ( 26) HIS64 1 0 0 0 0 0 0 0 (203) LYS241 0 0 0 3 4 0 0 0 prot.sequence ayveiieqpkqrgmRfRYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/gpylqileqpkqrgfRfRYvcEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >1lei_AB:p53-like_transcription_factors;E_set_domains; title=THE KB DNA SEQUENCE FROM THE HLV-LTR FUNCTIONS AS AN ALLOSTERIC REGULATOR OF HIV TRANSCRIPTION organism=MUS MUSCULUS DNA sequence DC(D2):DG(C16) DT(D3):DA(C15) DG(D4):DC(C14) 5IU(D5):DA(C13) DA(D6):DT(C12) DC(D7):DG(C11) 5IU(D8):DA(C10) 5IU(D9):DA(C9) 5IU(D10):DA(C8) DC(D11):DG(C7) DC(D12):DG(C6) DC(D13):DG(C5) DT(D14):DA(C4) DG(D15):DC(C3) DA(D16):DT(C2) DG(D17):DC(C1) chainA ( 15) ARG33 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG35 0 15 9 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) TYR36 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU39 0 0 3 14 13 0 0 0 0 0 0 0 0 0 0 0 (169) ARG187 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 chainB ( 16) ARG54 0 0 0 0 0 0 0 0 1 6 9 0 0 0 0 0 ( 18) ARG56 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 ( 19) TYR57 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 ( 21) CYS59 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 22) GLU60 0 0 0 0 0 0 0 0 15 8 0 0 0 0 0 0 ( 26) HIS64 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 (203) LYS241 0 0 0 0 0 0 0 13 5 0 0 0 0 0 0 0 prot.sequence ayveiieqpkqrgmrfRYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/gpylqileqpkqrgfRfRyvcEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydskapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >1lei_B:p53-like_transcription_factors;E_set_domains; title=THE KB DNA SEQUENCE FROM THE HLV-LTR FUNCTIONS AS AN ALLOSTERIC REGULATOR OF HIV TRANSCRIPTION organism=MUS MUSCULUS DNA sequence DC(D2):DG(C16) DT(D3):DA(C15) DG(D4):DC(C14) 5IU(D5):DA(C13) DA(D6):DT(C12) DC(D7):DG(C11) 5IU(D8):DA(C10) 5IU(D9):DA(C9) 5IU(D10):DA(C8) DC(D11):DG(C7) DC(D12):DG(C6) DC(D13):DG(C5) DT(D14):DA(C4) DG(D15):DC(C3) DA(D16):DT(C2) DG(D17):DC(C1) chainB ( 16) ARG54 0 0 0 0 0 0 0 0 1 6 9 0 0 0 0 0 ( 18) ARG56 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 ( 19) TYR57 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 ( 21) CYS59 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 22) GLU60 0 0 0 0 0 0 0 0 15 8 0 0 0 0 0 0 ( 26) HIS64 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 (203) LYS241 0 0 0 0 0 0 0 13 5 0 0 0 0 0 0 0 prot.sequence gpylqileqpkqrgfRfRyvcEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydskapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >1lfu_P:Homeodomain-like; title=NMR SOLUTION STRUCTURE OF THE EXTENDED PBX HOMEODOMAIN BOUND TO DNA organism=MUS MUSCULUS DNA sequence DG(B15):DC(A14) DG(B16):DC(A13) DG(B17):DC(A12) DC(B18):DG(A11) DA(B19):DT(A10) DA(B20):DT(A9) DT(B21):DA(A8) DC(B22):DG(A7) DA(B23):DT(A6) DT(B24):DA(A5) DG(B25):DC(A4) DC(B26):DG(A3) DG(B27):DC(A2) DC(B28):DG(A1) chainP ( 4) ARG3 0 0 0 0 0 3 9 0 0 0 0 0 0 0 ( 5) LYS4 0 0 0 0 0 0 0 0 11 17 2 0 0 0 ( 6) ARG5 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 51) ASN47 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 55) ASN51 0 0 0 0 0 2 6 0 0 0 0 0 0 0 ( 58) ILE54 0 0 0 0 6 1 0 0 0 0 0 0 0 0 prot.sequence marRKRrnfnkqateilneyfyshlsnpypseeakeelakksgitvsqvsNwfgNkrIrykknigkfqeeaniyaaktavta >1lli_AB:lambda_repressor-like_DNA-binding_domains; title=THE CRYSTAL STRUCTURE OF A MUTANT PROTEIN WITH ALTERED BUT IMPROVED HYDROPHOBIC CORE PACKING organism=Enterobacteria phage lambda DNA sequence DA(D2):DT(E20) DT(D3):DA(E19) DA(D4):DT(E18) DC(D5):DG(E17) DC(D6):DG(E16) DA(D7):DT(E15) DC(D8):DG(E14) DT(D9):DA(E13) DG(D10):DC(E12) DG(D11):DC(E11) DC(D12):DG(E10) DG(D13):DC(E9) DG(D14):DC(E8) DT(D15):DA(E7) DG(D16):DC(E6) DA(D17):DT(E5) DT(D18):DA(E4) DA(D19):DT(E3) DT(D20):DA(E2) chainA ( 1) LYS4 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN44 0 13 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER45 0 0 0 4 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ASN55 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 chainB ( 1) SER1 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 ( 2) THR2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 3) LYS3 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 ( 4) LYS4 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 11 0 ( 45) SER45 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 5 0 0 0 ( 54) ILE54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 55) ASN55 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 prot.sequence KkpltqeqledarrlkaiyekkknelglsqesladklgmgQSgigalfngiNalnaynaallakilkvsveefspsiareiyemyeavs/STKKkpltqeqledarrlkaiyekkknelglsqesladklgmgQSgigalfngINalnaynaallakilkvsveefspsiareiyemyeavs >1lli_B:lambda_repressor-like_DNA-binding_domains; title=THE CRYSTAL STRUCTURE OF A MUTANT PROTEIN WITH ALTERED BUT IMPROVED HYDROPHOBIC CORE PACKING organism=Enterobacteria phage lambda DNA sequence DA(D2):DT(E20) DT(D3):DA(E19) DA(D4):DT(E18) DC(D5):DG(E17) DC(D6):DG(E16) DA(D7):DT(E15) DC(D8):DG(E14) DT(D9):DA(E13) DG(D10):DC(E12) DG(D11):DC(E11) DC(D12):DG(E10) DG(D13):DC(E9) DG(D14):DC(E8) DT(D15):DA(E7) DG(D16):DC(E6) DA(D17):DT(E5) DT(D18):DA(E4) DA(D19):DT(E3) DT(D20):DA(E2) chainB ( 1) SER1 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 ( 2) THR2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 3) LYS3 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 ( 4) LYS4 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 11 0 ( 45) SER45 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 5 0 0 0 ( 54) ILE54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 55) ASN55 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 prot.sequence STKKkpltqeqledarrlkaiyekkknelglsqesladklgmgQSgigalfngINalnaynaallakilkvsveefspsiareiyemyeavs >1llm_CD:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF A ZIF23-GCN4 CHIMERA BOUND TO DNA organism=MUS MUSCULUS, SACCHAROMYCES CEREVISIAE DNA sequence DC(A2):DG(B33) DC(A3):DG(B32) DC(A4):DG(B31) DA(A5):DT(B30) DC(A6):DG(B29) DG(A7):DC(B28) DC(A8):DG(B27) DG(A9):DC(B26) DT(A10):DA(B25) DG(A11):DC(B24) DG(A12):DC(B23) DG(A13):DC(B22) chainC ( 15) ARG115 10 14 16 0 0 0 0 0 0 0 0 0 ( 17) ASP117 12 1 0 0 0 0 0 0 0 0 0 0 ( 18) HIS118 0 0 11 26 0 0 0 0 0 0 0 0 ( 21) THR121 0 0 0 1 0 0 0 0 0 0 0 0 ( 43) ARG143 0 0 0 11 13 12 0 0 0 0 0 0 ( 45) ASP145 0 0 5 8 2 0 0 0 0 0 0 0 ( 46) GLU146 0 0 0 0 0 6 2 0 0 0 0 0 ( 49) ARG149 0 0 0 4 6 5 0 0 0 0 0 0 chainD ( 15) ARG215 0 0 0 0 0 0 0 0 0 11 14 3 ( 17) ASP217 0 0 0 0 0 0 0 0 0 0 2 8 ( 18) HIS218 0 0 0 0 0 0 0 0 26 11 0 0 ( 21) THR221 0 0 0 0 0 0 0 0 1 0 0 0 ( 43) ARG243 0 0 0 0 0 0 12 12 11 0 0 0 ( 45) ASP245 0 0 0 0 0 0 0 2 8 3 0 0 ( 46) GLU246 0 0 0 0 0 1 6 0 0 0 0 0 ( 49) ARG249 0 0 0 0 3 7 8 6 0 0 0 0 prot.sequence mkpfqcricmrnfsRsDHltThirthtgekpfacdicgrkfaRsDErkRhrdiqhilpiledkveellsknyhlenevarlkklvge/mkpfqcricmrnfsRsDHltThirthtgekpfacdicgrkfaRsDErkRhrdiqhilpiledkveellsknyhlenevarlkklv >1llm_D:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF A ZIF23-GCN4 CHIMERA BOUND TO DNA organism=MUS MUSCULUS, SACCHAROMYCES CEREVISIAE DNA sequence DC(B22):DG(A13) DC(B23):DG(A12) DC(B24):DG(A11) DA(B25):DT(A10) DC(B26):DG(A9) DG(B27):DC(A8) DC(B28):DG(A7) DG(B29):DC(A6) DT(B30):DA(A5) DG(B31):DC(A4) DG(B32):DC(A3) DG(B33):DC(A2) chainD ( 15) ARG215 3 14 11 0 0 0 0 0 0 0 0 0 ( 17) ASP217 8 2 0 0 0 0 0 0 0 0 0 0 ( 18) HIS218 0 0 11 26 0 0 0 0 0 0 0 0 ( 21) THR221 0 0 0 1 0 0 0 0 0 0 0 0 ( 43) ARG243 0 0 0 11 12 12 0 0 0 0 0 0 ( 45) ASP245 0 0 3 8 2 0 0 0 0 0 0 0 ( 46) GLU246 0 0 0 0 0 6 1 0 0 0 0 0 ( 49) ARG249 0 0 0 0 6 8 7 3 0 0 0 0 prot.sequence mkpfqcricmrnfsRsDHltthirthtgekpfacdicgrkfaRsDerkRhrdiqhilpiledkveellsknyhlenevarlkklv >1lmb_34:lambda_repressor-like_DNA-binding_domains; title=REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR- OPERATOR COMPLEX organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DA(12):DT(240) DT(13):DA(239) DA(14):DT(238) DC(15):DG(237) DC(16):DG(236) DA(17):DT(235) DC(18):DG(234) DT(19):DA(233) DG(110):DC(232) DG(111):DC(231) DC(112):DG(230) DG(113):DC(229) DG(114):DC(228) DT(115):DA(227) DG(116):DC(226) DA(117):DT(225) DT(118):DA(224) DA(119):DT(223) DT(120):DA(222) chain3 ( 29) GLU34 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN44 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER45 0 0 0 6 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN55 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 chain4 ( 3) LYS3 0 0 0 0 0 0 0 0 0 10 10 14 0 0 0 0 0 0 0 ( 4) LYS4 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 ( 34) GLU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 11 0 ( 45) SER45 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 5 0 0 0 ( 55) ASN55 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 prot.sequence pltqeqledarrlkaiyekkknelglsqEsvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavs/stKKkpltqeqledarrlkaiyekkknelglsqEsvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavs >1lmb_4:lambda_repressor-like_DNA-binding_domains; title=REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR- OPERATOR COMPLEX organism=? DNA sequence DA(222):DT(120) DT(223):DA(119) DA(224):DT(118) DT(225):DA(117) DC(226):DG(116) DA(227):DT(115) DC(228):DG(114) DC(229):DG(113) DG(230):DC(112) DC(231):DG(111) DC(232):DG(110) DA(233):DT(19) DG(234):DC(18) DT(235):DA(17) DG(236):DC(16) DG(237):DC(15) DT(238):DA(14) DA(239):DT(13) DT(240):DA(12) chain4 ( 3) LYS3 0 0 0 0 0 0 0 14 10 10 0 0 0 0 0 0 0 0 0 ( 4) LYS4 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 ( 34) GLU34 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN44 0 11 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) SER45 0 0 0 5 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ASN55 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stKKkpltqeqledarrlkaiyekkknelglsqEsvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavs >1lo1_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=ESTROGEN RELATED RECEPTOR 2 DNA BINDING DOMAIN IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DC(C14):DG(B13) DG(C15):DC(B12) DT(C16):DA(B11) DG(C17):DC(B10) DA(C18):DT(B9) DC(C19):DG(B8) DC(C20):DG(B7) DT(C21):DA(B6) DT(C22):DA(B5) DG(C23):DC(B4) DA(C24):DT(B3) DG(C25):DC(B2) DC(C26):DG(B1) chainA ( 18) HIS114 0 0 0 0 0 0 3 4 0 0 0 0 0 ( 25) GLU121 0 0 0 0 5 11 1 0 0 0 0 0 0 ( 26) ALA122 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 28) LYS124 0 0 0 0 1 6 7 0 0 0 0 0 0 ( 29) ALA125 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 32) LYS128 0 0 0 0 2 4 0 0 0 0 0 0 0 ( 33) ARG129 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 83) ARG179 0 0 0 0 0 0 10 12 2 0 0 0 0 ( 86) ARG182 0 0 0 0 0 0 0 0 0 9 9 5 0 prot.sequence aipkrlclvcgdiasgyHygvascEAcKAffKRtiqgnieyscpatneceitkrrrkscqacrfmkalkvgmlkegvrldrvRggRqkyk >1lpq_A:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes;Eukaryotic_DNA_topoisomerase_I,_dispensable_insert_domain; title=HUMAN DNA TOPOISOMERASE I (70 KDA) IN NON-COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX CONTAINING AN 8-OXOG LESION organism=Homo sapiens DNA sequence DA(C101):DT(B22) DA(C102):DT(B21) DA(C103):DT(B20) DA(C104):DT(B19) DA(C105):DT(B18) DT(C106):DA(B17) DT(C107):DA(B16) DT(C108):DA(B15) DT(C109):DA(B14) DT(C110):DA(B13) DC(C111):DG(B12) DC(C112):8OG(B11) DA(C113):DT(B10) DA(C114):DT(B9) DG(C115):DC(B8) DT(C116):DA(B7) DC(C117):DG(B6) DT(C118):DA(B5) DT(C119):DA(B4) DT(C120):DA(B3) DT(C121):DA(B2) DT(C122):DA(B1) chainA (163) ARG364 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (225) TYR426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 (227) MET428 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (290) ASN491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 (331) LYS532 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 (510) THR718 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (514) ASN722 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence kwkwweeerypegikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkerianfkieppglfrgRgnhpkmgmlkrrimpediiincskdakvpspppghkwkevrhdnkvtwlvswteniqgsikYiMlnpssrikgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNekeegetadtvgccslrvehinlhpeldgqeyvvefdflgKdsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynranravailcnhqeksmmnlqtkidakkeqladarrdlksakadakvmkdaktkkvveskkkavqrleeqlmklevqatdreenkqialgtsklnfldpritvawckkwgvpiekiynktqrekfawaidmadedyef >1lq1_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=DNA COMPLEXED STRUCTURE OF THE KEY TRANSCRIPTION FACTOR INITIATING DEVELOPMENT IN SPORULATION BACTERIA organism=Bacillus subtilis DNA sequence DC(H116):DG(G16) DA(H117):DT(G15) DA(H118):DT(G14) DA(H119):DT(G13) DA(H120):DT(G12) DT(H121):DA(G11) DT(H122):DA(G10) DC(H123):DG(G9) DG(H124):DC(G8) DA(H125):DT(G7) DC(H126):DG(G6) DA(H127):DT(G5) DC(H128):DG(G4) DG(H129):DC(G3) DA(H130):DT(G2) chainA ( 45) THR194 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 61) SER210 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 64) GLU213 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 ( 65) ARG214 0 0 0 0 0 0 0 0 0 11 13 7 0 0 0 ( 68) ARG217 0 0 0 0 0 0 0 17 11 0 0 0 0 0 0 ( 69) HIS218 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 chainB ( 63) ARG214 12 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) HIS218 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kknldasitsiiheigvpahikgylylreaismvyndiellgsiTkvlypdiakkfnttaSrvERaiRHaievawsrgnidsisslfakptnsefiamvadklrleh/nldasitsiiheigvpahikgylylreaismvyndiellgsitkvlypdiakkfnttasrveRairHaievawsrgnidsisslfakptnsefiamvadklrl >1lq1_D:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=DNA COMPLEXED STRUCTURE OF THE KEY TRANSCRIPTION FACTOR INITIATING DEVELOPMENT IN SPORULATION BACTERIA organism=Bacillus subtilis DNA sequence DT(E2):DA(F130) DC(E3):DG(F129) DG(E4):DC(F128) DT(E5):DA(F127) DG(E6):DC(F126) DT(E7):DA(F125) DC(E8):DG(F124) DG(E9):DC(F123) DA(E10):DT(F122) DA(E11):DT(F121) DT(E12):DA(F120) DT(E13):DA(F119) DT(E14):DA(F118) DT(E15):DA(F117) DG(E16):DC(F116) chainD ( 44) THR194 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 60) SER210 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 63) GLU213 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 ( 64) ARG214 0 0 0 6 16 13 0 0 0 0 0 0 0 0 0 ( 67) ARG217 0 0 0 0 0 1 14 19 0 0 0 0 0 0 0 ( 68) HIS218 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence knldasitsiiheigvpahikgylylreaismvyndiellgsiTkvlypdiakkfnttaSrvERaiRHaievawsrgnidsisslfkakptnsefiamvadklrleh >1lrr_A:Replication_modulator_SeqA,_C-terminal_DNA-binding_domain; title=CRYSTAL STRUCTURE OF E. COLI SEQA COMPLEXED WITH HEMIMETHYLATED DNA organism=Escherichia coli DNA sequence DA(C1):DT(B12) DG(C2):DC(B11) DT(C3):DA(B10) DC(C4):DG(B9) DG(C5):DC(B8) 6MA(C6):DT(B7) DT(C7):DA(B6) DC(C8):DG(B5) DG(C9):DC(B4) DG(C10):DC(B3) DT(C11):DA(B2) DG(C12):DC(B1) chainA ( 53) ARG116 0 0 0 0 0 0 0 0 0 5 1 0 ( 55) ARG118 0 0 0 0 0 0 7 0 0 0 0 0 ( 71) GLN134 0 0 0 0 2 3 0 0 0 0 0 0 ( 87) ASN150 0 0 0 0 4 11 7 0 0 0 0 0 ( 89) ASN152 0 0 0 0 0 6 9 1 0 0 0 0 ( 92) ARG155 0 0 0 0 0 0 0 0 4 0 0 0 prot.sequence tikdkvramrelllsdeyaeqkravnrfmlllstlysldaqafaeateslhgRtRvyfaadeqtllkngnQtkpkhvpgtpywvitNtNtgRkcsmiehimqsmqfpaeliekvcgti >1lv5_B:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE CLOSED CONFORMATION OF BACILLUS DNA POLYMERASE I FRAGMENT BOUND TO DNA AND DCTP organism=Geobacillus stearothermophilus DNA sequence DG(E20):DC(F13) DG(E21):DC(F12) DA(E22):DT(F11) DT(E23):DA(F10) DC(E24):DG(F9) DA(E25):DT(F8) DG(E26):DC(F7) DC(E27):DG(F6) DG(E28):DC(F5) DA(E29):DT(F4) chainB (286) LYS582 0 0 0 0 0 1 10 2 0 0 (291) TYR587 0 0 0 0 0 0 0 2 0 0 (319) ARG615 0 0 0 0 0 0 0 0 4 11 (329) ASN625 0 0 0 0 0 0 1 8 1 0 (501) GLN797 0 0 0 0 0 0 0 0 0 1 (533) HIS829 0 0 0 0 0 0 0 0 1 0 prot.sequence akmaftladrvteemladkaalvvevveenyhaapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepnlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1lws_A:Hedgehog/intein_Hint_domain;Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE INTEIN HOMING ENDONUCLEASE PI-SCEI BOUND TO ITS RECOGNITION SEQUENCE organism=Saccharomyces cerevisiae DNA sequence DA(C4):DT(B35) DT(C5):DA(B34) DT(C6):DA(B33) DT(C7):DA(B32) DC(C8):DG(B31) DA(C9):DT(B30) DT(C10):DA(B29) DT(C11):DA(B28) DA(C12):DT(B27) DC(C13):DG(B26) DC(C14):DG(B25) DT(C15):DA(B24) DC(C16):DG(B23) DT(C17):DA(B22) DT(C18):DA(B21) DT(C19):DA(B20) DC(C20):DG(B19) DT(C21):DA(B18) DC(C22):DG(B17) DC(C23):DG(B16) DG(C24):DC(B15) DC(C25):DG(B14) DA(C26):DT(B13) DC(C27):DG(B12) DC(C28):DG(B11) DC(C29):DG(B10) DG(C30):DC(B9) DA(C31):DT(B8) DC(C32):DG(B7) DA(C33):DT(B6) DT(C34):DA(B5) DA(C35):DT(B4) DG(C36):DC(B3) DA(C37):DT(B2) chainA ( 55) GLN55 0 0 0 0 0 0 0 0 0 0 0 0 12 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG57 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG90 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG94 0 0 1 6 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ILE96 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) GLU103 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) SER127 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) SER129 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) SER169 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) HIS170 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) LEU220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (219) ARG223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (301) TYR328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) HIS333 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) LYS336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) LYS340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ASN364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) GLU366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ASP371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) THR375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (350) HIS377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 12 0 0 0 0 0 0 0 0 0 0 0 0 (353) SER380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) TYR384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence cfakgtnvlmadgsiecienievgnkvmgkdgrpreviklprgretmysvvqksQhRahksdssrevpellkftcnathelvvrtprsvRrlsRtIkgvfEvitfemgqkkapdgrivelvkevSkSypisperanelvesyrkasnkayfewtieardlsllgSHvrkatyqtyapilyendhffdymqkskfhltiegpkvlayllglwigdgLsdRatfsvdsrdtslmervteyaeklnlcavaktvnlysenplwdaivglgflkdgvknipsflstdnigtretflaglidsdgYvtdeHgiKatiKtihtsvrdglvslarslglvvsvNaEpakvDmngTkHkiSyaiYmsggdvllnvlskcagskkfrpapaaafarecrgfyfelqelkeddyygitlsddsdhqfllanqvvvhn >1lwt_A:Hedgehog/intein_Hint_domain;Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE INTEIN HOMING ENDONUCLEASE PI-SCEI BOUND TO ITS SUBSTRATE DNA (CA2+ FREE) organism=Saccharomyces cerevisiae DNA sequence DT(B2):DA(C37) DC(B3):DG(C36) DT(B4):DA(C35) DA(B5):DT(C34) DT(B6):DA(C33) DG(B7):DC(C32) DT(B8):DA(C31) DC(B9):DG(C30) DG(B10):DC(C29) DG(B11):DC(C28) DG(B12):DC(C27) DT(B13):DA(C26) DG(B14):DC(C25) DC(B15):DG(C24) DG(B16):DC(C23) DG(B17):DC(C22) DA(B18):DT(C21) DG(B19):DC(C20) DA(B20):DT(C19) DA(B21):DT(C18) DA(B22):DT(C17) DG(B23):DC(C16) DA(B24):DT(C15) DG(B25):DC(C14) DG(B26):DC(C13) DT(B27):DA(C12) DA(B28):DT(C11) DA(B29):DT(C10) DT(B30):DA(C9) DG(B31):DC(C8) DA(B32):DT(C7) DA(B33):DT(C6) DA(B34):DT(C5) DT(B35):DA(C4) DG(B36):DC(C3) DG(B37):DC(C2) chainA ( 55) GLN55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 17 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 ( 90) LEU92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 92) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 8 0 0 0 0 0 ( 94) ILE96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 95) LYS97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 99) TYR101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (101) GLU103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (123) GLU125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (125) SER127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (127) SER129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (167) SER169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (168) HIS170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 (171) LYS173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (221) ARG223 0 0 0 0 10 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (322) TYR328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) LYS340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ASN364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (360) GLU366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (363) LYS369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) ASP371 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (367) ASN373 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) THR375 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) HIS377 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) TYR384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence cfakgtnvlmadgsiecienievgnkvmgkdgrpreviklprgretmysvvqksQhrahkssrevpellkftcnathelvvrtprsvRrLsRtIKgveYfEvitfemgqkkapdgrivelvkEvSkSypisegperanelvesyrkasnkayfewtieardlsllgSHvrKatyqtyapilyendhffdymqkskfhltiegpkvlayllglwigdglsdRatfsvdsrdtslmervteyaeklnlcaeykdrkaktvnlyskvvrgngirnnlntenplwdaivglgflkdgvknipsflstdnigtretflaglidsdgYvtdehgikatiKtihtsvrdglvslarslglvvsvNaEpaKvDmNgTkHkisyaiYmsggdvllnvlskcagskkfrpapaaafarecrgfyfelqelkeddyygitlsddsdhqfllanqvvvhn >1lwv_A:DNA-glycosylase;TATA-box_binding_protein-like; title=BOROHYDRIDE-TRAPPED HOGG1 INTERMEDIATE STRUCTURE CO-CRYSTALLIZED WITH 8-AMINOGUANINE organism=Homo sapiens DNA sequence DG(D1):DC(E30) DG(D2):DC(E29) DT(D3):DA(E28) DA(D4):DT(E27) DG(D5):DC(E26) DA(D6):DT(E25) DC(D7):DG(E24) DC(D8):DA(E22) DT(D9):DC(E21) DG(D10):DC(E20) DG(D11):DT(E19) DA(D12):DG(E18) DC(D13):DC(E17) DG(D14):DG(E16) chainA (138) ASN149 0 0 0 0 0 0 31 11 0 0 0 0 0 0 (139) ASN150 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (140) ASN151 0 0 0 0 0 0 0 4 0 1 0 0 0 0 (143) ARG154 0 0 0 0 0 0 0 11 15 0 0 0 0 0 (192) TYR203 0 0 0 0 0 0 12 15 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (282) PRO293 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficsSNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRaryvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaqavlfsadlrq >1lww_A:DNA-glycosylase;TATA-box_binding_protein-like; title=BOROHYDRIDE-TRAPPED HOGG1 INTERMEDIATE STRUCTURE CO-CRYSTALLIZED WITH 8-BROMOGUANINE organism=Homo sapiens DNA sequence DG(D1):DC(E30) DG(D2):DC(E29) DT(D3):DA(E28) DA(D4):DT(E27) DG(D5):DC(E26) DA(D6):DT(E25) DC(D7):DG(E24) DC(D8):DA(E22) DT(D9):DC(E21) DG(D10):DC(E20) DG(D11):DT(E19) DA(D12):DG(E18) DC(D13):DC(E17) DG(D14):DG(E16) chainA (138) ASN149 0 0 0 0 0 0 32 13 0 0 0 0 0 0 (139) ASN150 0 0 0 0 0 0 0 2 1 0 0 0 0 0 (140) ASN151 0 0 0 0 0 0 0 5 0 1 0 0 0 0 (143) ARG154 0 0 0 0 0 0 0 10 11 0 0 0 0 0 (192) TYR203 0 0 0 0 0 0 17 15 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (196) TYR207 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (282) PRO293 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficsSNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaqavlfsadlrq >1lwy_A:DNA-glycosylase;TATA-box_binding_protein-like; title=HOGG1 BOROHYDRIDE-TRAPPED INTERMEDIATE WITHOUT 8-OXOGUANINE organism=Homo sapiens DNA sequence DG(D2):DC(E29) DT(D3):DA(E28) DA(D4):DT(E27) DG(D5):DC(E26) DA(D6):DT(E25) DC(D7):DG(E24) DC(D8):PED(E23) DT(D9):DA(E22) DG(D10):DC(E21) DG(D11):DC(E20) DA(D12):DT(E19) DC(D13):DG(E18) DG(D14):DC(E17) DC(D15):DG(E16) chainA (138) ASN149 0 0 0 0 0 60 5 8 0 0 0 0 0 0 (139) ASN150 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (140) ASN151 0 0 0 0 0 0 0 4 1 0 0 0 0 0 (143) ARG154 0 0 0 0 0 0 11 10 0 0 0 0 0 0 (192) TYR203 0 0 0 0 0 28 13 0 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (196) TYR207 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (282) PRO293 0 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficssNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaqavlfsadlrq >1m0e_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=ZEBULARINE: A NOVEL DNA METHYLATION INHIBITOR THAT FORMS A COVALENT COMPLEX WITH DNA METHYLTRANSFERASE organism=Haemophilus haemolyticus DNA sequence DG(D422):DC(C413) DT(D423):DA(C412) DC(D424):DG(C411) DA(D425):DT(C410) DG(D426):DC(C409) DG(D428):DC(C407) DC(D429):DG(C406) DA(D430):DT(C405) DT(D431):DA(C404) DG(D432):DC(C403) DG(D433):DC(C402) chainA ( 86) ILE86 0 0 2 2 1 0 0 0 0 0 0 ( 87) SER87 0 0 0 0 10 8 0 0 0 0 0 (228) ARG228 0 0 0 1 0 0 0 0 0 0 0 (237) GLN237 0 0 0 0 34 23 0 0 0 0 0 (239) GLU239 0 0 0 0 0 1 1 0 0 0 0 (240) ARG240 0 0 0 9 12 0 0 0 0 0 0 (254) TYR254 0 0 0 0 0 0 1 0 0 0 0 (260) ALA260 0 0 0 0 0 0 0 1 0 0 0 (261) LYS261 0 0 0 0 0 0 0 2 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgERiystrgiaitlsaYgggifAKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy >1m18_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=LIGAND BINDING ALTERS THE STRUCTURE AND DYNAMICS OF NUCLEOSOMAL DNA organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 2) HIS439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 4) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 13) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/trkesyaiyvykvlkqvhpdtgisskamSimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/kvlrdniqgitkPaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfPvgRvhrllrkgnYaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/trkesyaiyvykVlkQvhpdtgissKamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1m19_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=LIGAND BINDING ALTERS THE STRUCTURE AND DYNAMICS OF NUCLEOSOMAL DNA organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 5) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 30) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR641 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 16) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG1042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence kkphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllRkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/trkesyaiyvykvlkqvhpdtGisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/trkesyaiyvykvlkqvhpdtgisskaMsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1m19_G:Histone-fold; title=LIGAND BINDING ALTERS THE STRUCTURE AND DYNAMICS OF NUCLEOSOMAL DNA organism=? DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainG ( 28) ARG1042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk >1m1a_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=LIGAND BINDING ALTERS THE STRUCTURE AND DYNAMICS OF NUCLEOSOMAL DNA organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 4) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 36) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG1042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 8) ILE1436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssragLqfpvgrvhrllrKgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/trkesyaiyVykvlkqvhpdtgIsskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/lgkggakrhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/trkesyaIyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >1m1a_E:Histone-fold; title=LIGAND BINDING ALTERS THE STRUCTURE AND DYNAMICS OF NUCLEOSOMAL DNA organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainE ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >1m3h_A:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF HOGG1 D268E MUTANT WITH PRODUCT OLIGONUCLEOTIDE organism=Homo sapiens DNA sequence DG(B1):DC(D30) DG(B2):DC(D29) DT(B3):DA(D28) DA(B4):DT(D27) DG(B5):DC(D26) DA(B6):DT(D25) DC(B7):DG(D24) chainA (138) ASN149 0 0 0 0 0 0 29 (192) TYR203 0 0 0 0 0 0 9 (196) TYR207 0 0 0 0 0 1 0 (282) PRO293 0 0 1 0 0 0 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficssNnniaritgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYrarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvevhmwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaqavlfsadlrq >1m3q_A:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF HOGG1 D268E MUTANT WITH BASE-EXCISED DNA AND 8- AMINOGUANINE organism=Homo sapiens DNA sequence DG(C16):DC(B15) DC(C17):DG(B14) DG(C18):DC(B13) DT(C19):DA(B12) DC(C20):DG(B11) DC(C21):DG(B10) DA(C22):DT(B9) DG(C24):DC(B8) DT(C25):DC(B7) DC(C26):DA(B6) DT(C27):DG(B5) DA(C28):DA(B4) DC(C29):DT(B3) DC(C30):DG(B2) chainA (138) ASN149 0 0 0 0 0 0 9 31 4 0 0 0 0 0 (139) ASN150 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (140) ASN151 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (143) ARG154 0 0 0 0 0 0 7 5 0 0 0 0 0 0 (192) TYR203 0 0 0 0 0 0 0 24 3 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (196) TYR207 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (282) PRO293 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficssNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvevhmwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaqavlfsadlrq >1m5x_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-MSOI BOUND TO ITS DNA SUBSTRATE organism=Monomastix sp. DNA sequence DG(C501):DC(D574) DC(C502):DG(D573) DA(C503):DT(D572) DG(C504):DC(D571) DA(C505):DT(D570) DA(C506):DT(D569) DC(C507):DG(D568) DG(C508):DC(D567) DT(C509):DA(D566) DC(C510):DG(D565) DG(C511):DC(D564) DT(C512):DA(D563) DG(C513):DC(D562) DA(C514):DT(D561) DG(C515):DC(D560) DA(C516):DT(D559) DC(C517):DG(D558) DA(C518):DT(D557) DG(C519):DC(D556) DT(C520):DA(D555) DT(C521):DA(D554) DC(C522):DG(D553) DC(C523):DG(D552) DG(C524):DC(D551) chainA ( 19) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 0 0 0 0 ( 23) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 ( 27) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 0 0 ( 29) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 30) TYR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 ( 36) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 44) ILE49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 16 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 20 0 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 ( 76) ASP81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 80) ILE85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence tlqpteaayiagfldgdgSiYaKlipRpDYkdikyQvslaiSfIqrkdkfpylqdiydqlgkrgnlRkdRgDgIaDyTiIgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki >1m5x_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-MSOI BOUND TO ITS DNA SUBSTRATE organism=Monomastix sp. DNA sequence DG(C501):DC(D574) DC(C502):DG(D573) DA(C503):DT(D572) DG(C504):DC(D571) DA(C505):DT(D570) DA(C506):DT(D569) DC(C507):DG(D568) DG(C508):DC(D567) DT(C509):DA(D566) DC(C510):DG(D565) DG(C511):DC(D564) DT(C512):DA(D563) DG(C513):DC(D562) DA(C514):DT(D561) DG(C515):DC(D560) DA(C516):DT(D559) DC(C517):DG(D558) DA(C518):DT(D557) DG(C519):DC(D556) DT(C520):DA(D555) DT(C521):DA(D554) DC(C522):DG(D553) DC(C523):DG(D552) DG(C524):DC(D551) chainA ( 19) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 0 0 0 0 ( 23) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 ( 27) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 0 0 ( 29) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 30) TYR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 ( 36) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 44) ILE49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 16 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 20 0 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 ( 76) ASP81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 80) ILE85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 chainB ( 19) SER224 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR226 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LYS228 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ILE230 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG232 0 0 21 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASP234 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) TYR235 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE249 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG272 0 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG275 0 0 0 0 0 0 0 0 23 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASP277 0 0 0 0 0 0 0 0 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ILE279 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ILE285 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tlqpteaayiagfldgdgSiYaKlipRpDYkdikyQvslaiSfIqrkdkfpylqdiydqlgkrgnlRkdRgDgIaDyTiIgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki/tlqpteaayiagfldgdgSiYaKlIpRpDYkdikyqvslaiSfIqrkdkfpylqdiydqlgkrgnlRkdRgDgIaDyTiIgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki >1m6x_D:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=FLPE-HOLLIDAY JUNCTION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(H2):DT(J32) DA(H3):DT(J31) DG(H4):DC(J30) DT(H5):DA(J29) DT(H6):DA(J28) DC(H7):DG(J27) DC(H8):DG(J26) DT(H9):DA(J25) DA(H10):DT(J24) DT(H11):DA(J23) DT(H12):DA(J22) DC(H13):DG(J21) DT(H14):DA(J20) DT(H15):DA(J19) DT(H16):DA(J18) chainD ( 54) ALA55 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 55) THR56 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 57) MET58 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 58) SER59 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 59) TYR60 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 61) THR62 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 81) LYS82 0 0 0 0 0 0 0 0 0 0 1 9 2 0 0 (157) ARG170 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) LYS223 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 (261) ASN278 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 (264) ARG281 0 0 0 3 12 19 24 0 0 0 0 0 0 0 0 (265) SER282 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (267) ASN284 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (268) LYS285 0 1 8 7 0 0 0 0 0 0 0 0 0 0 0 (316) LYS333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence sqfdilcktppkvlvrqfverferpsgekiascaaeltylcwmithngtaikrATfMSYnTiisnslsfdivnkslqfkyKtqkatileaslkklipaweftiipynsditdivsslqlqfesnshskkmlkallsegesiweitekilnsfeytsRftktktlyqflflatfincgrfsdiknvdpksfklvqnkylgviiqclvtetKtsvsrhiyffsargridplvyldeflrnsepvlkrvnrtgnkqeyqllkdNlvRSyNKalkknapypifaikngpkshigrhlmtsflsmkglteltnvvgnwsdKrasavarttthqitaipdhyfalvsryyaydpiskemialkdetnpieewqhieqegsirypawngiisqevldylssyinrr >1ma7_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF CRE SITE-SPECIFIC RECOMBINASE COMPLEXED WITH A MUTANT DNA SUBSTRATE, LOXP-A8/T27 organism=Enterobacteria phage P1 DNA sequence DA(D1):DT(C34) DT(D2):DA(C33) DA(D3):DT(C32) DA(D4):DT(C31) DC(D5):DG(C30) DT(D6):DA(C29) DT(D7):DA(C28) DA(D8):DT(C27) DG(D9):DC(C26) DT(D10):DA(C25) DA(D11):DT(C24) DT(D12):DA(C23) DA(D13):DT(C22) DG(D14):DC(C21) DC(D15):DG(C20) DA(D18):DT(C19) DC(D19):DG(C16) DA(D20):DT(C15) DT(D21):DA(C14) DT(D22):DA(C13) DA(D23):DT(C12) DT(D24):DA(C11) DA(D25):DT(C10) DC(D26):DG(C9) DT(D27):DA(C8) DA(D28):DT(C7) DA(D29):DT(C6) DG(D30):DC(C5) DT(D31):DA(C4) DT(D32):DA(C3) DA(D33):DT(C2) DT(D34):DA(C1) chainA ( 22) HIS40 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) THR41 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS43 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) MET44 0 0 0 0 0 0 0 0 0 5 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER47 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR87 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN90 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) ARG241 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS244 8 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER257 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) ARG259 0 0 0 0 0 3 9 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) GLU262 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) ARG282 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tsdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled >1ma7_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF CRE SITE-SPECIFIC RECOMBINASE COMPLEXED WITH A MUTANT DNA SUBSTRATE, LOXP-A8/T27 organism=Enterobacteria phage P1 DNA sequence DA(D1):DT(C34) DT(D2):DA(C33) DA(D3):DT(C32) DA(D4):DT(C31) DC(D5):DG(C30) DT(D6):DA(C29) DT(D7):DA(C28) DA(D8):DT(C27) DG(D9):DC(C26) DT(D10):DA(C25) DA(D11):DT(C24) DT(D12):DA(C23) DA(D13):DT(C22) DG(D14):DC(C21) DC(D15):DG(C20) DA(D18):DT(C19) DC(D19):DG(C16) DA(D20):DT(C15) DT(D21):DA(C14) DT(D22):DA(C13) DA(D23):DT(C12) DT(D24):DA(C11) DA(D25):DT(C10) DC(D26):DG(C9) DT(D27):DA(C8) DA(D28):DT(C7) DA(D29):DT(C6) DG(D30):DC(C5) DT(D31):DA(C4) DT(D32):DA(C3) DA(D33):DT(C2) DT(D34):DA(C1) chainA ( 22) HIS40 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) THR41 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS43 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) MET44 0 0 0 0 0 0 0 0 0 5 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER47 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR87 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN90 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) ARG241 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS244 8 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER257 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) ARG259 0 0 0 0 0 3 9 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) GLU262 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) ARG282 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 4 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 11 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (224) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 (225) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 6 (238) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 9 1 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 prot.sequence tsdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrriRkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirngamvrlled >1mdm_AB:Homeodomain-like;"Winged_helix"_DNA-binding_domain; title=INHIBITED FRAGMENT OF ETS-1 AND PAIRED DOMAIN OF PAX5 BOUND TO DNA organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DA(D2):DT(C26) DG(D3):DC(C25) DG(D4):DC(C24) DC(D5):DG(C23) DC(D6):DG(C22) DA(D7):DT(C21) DC(D8):DG(C20) DT(D9):DA(C19) DG(D10):DC(C18) DG(D11):DC(C17) DA(D12):DT(C16) DG(D13):DC(C15) DC(D14):DG(C14) DC(D15):DG(C13) DC(D16):DG(C12) DA(D17):DT(C11) DT(D18):DA(C10) DC(D19):DG(C9) DT(D20):DA(C8) DC(D21):DG(C7) DC(D22):DG(C6) DG(D23):DC(C5) DG(D24):DC(C4) DC(D25):DG(C3) DA(D26):DT(C2) chainA ( 11) ASN29 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 ( 44) HIS62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 17 0 0 0 0 0 0 ( 48) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 49) LYS67 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 65) ILE83 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) SER86 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) SER131 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) SER133 0 0 3 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) SER134 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) ASN136 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ARG137 0 0 0 0 1 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 79) GLU387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 80) LYS388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 83) ARG391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 19 26 0 0 0 0 ( 86) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 15 0 0 0 ( 87) TYR395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 prot.sequence gvnqlggvfvNgrplpdvvrqrivelahqgvrpcdisrqlrvSHgcvSKilgryyetgsikpgvIggSkpkvatpkvvekiaeykrqnptmfaweirdrllaervcdndtvpSvSSiNRiirtk/rdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkp >1mdm_B:"Winged_helix"_DNA-binding_domain; title=INHIBITED FRAGMENT OF ETS-1 AND PAIRED DOMAIN OF PAX5 BOUND TO DNA organism=MUS MUSCULUS DNA sequence DA(D2):DT(C26) DG(D3):DC(C25) DG(D4):DC(C24) DC(D5):DG(C23) DC(D6):DG(C22) DA(D7):DT(C21) DC(D8):DG(C20) DT(D9):DA(C19) DG(D10):DC(C18) DG(D11):DC(C17) DA(D12):DT(C16) DG(D13):DC(C15) DC(D14):DG(C14) DC(D15):DG(C13) DC(D16):DG(C12) DA(D17):DT(C11) DT(D18):DA(C10) DC(D19):DG(C9) DT(D20):DA(C8) DC(D21):DG(C7) DC(D22):DG(C6) DG(D23):DC(C5) DG(D24):DC(C4) DC(D25):DG(C3) DA(D26):DT(C2) chainB ( 79) GLU387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 80) LYS388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 83) ARG391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 19 26 0 0 0 0 ( 86) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 15 0 0 0 ( 87) TYR395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 prot.sequence rdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkp >1mdy_AB: title=CRYSTAL STRUCTURE OF MYOD BHLH DOMAIN BOUND TO DNA: PERSPECTIVES ON DNA RECOGNITION AND IMPLICATIONS FOR TRANSCRIPTIONAL ACTIVATION organism=MUS MUSCULUS DNA sequence DT(E1):DA(F28) DC(E2):DG(F27) DA(E3):DT(F26) DA(E4):DT(F25) DC(E5):DG(F24) DA(E6):DT(F23) DG(E7):DC(F22) DC(E8):DG(F21) DT(E9):DA(F20) DG(E10):DC(F19) DT(E11):DA(F18) DT(E12):DA(F17) DG(E13):DC(F16) DA(E14):DT(F15) chainA ( 13) ARG111 0 0 0 0 6 4 0 0 0 0 0 0 0 0 ( 17) THR115 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 19) ARG117 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 20) GLU118 0 0 0 0 10 8 0 0 0 0 0 0 0 0 ( 23) ARG121 0 0 0 2 5 0 0 0 0 0 0 0 0 0 chainB ( 7) ARG111 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 11) THR115 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 13) ARG117 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 14) GLU118 0 0 0 0 0 0 0 1 8 10 0 0 0 0 ( 17) ARG121 0 0 0 0 0 0 0 0 0 6 1 0 0 0 prot.sequence melkrkttnadrRkaaTmRErrRlskvneafetlkrstssnpnqrlpkveilrnairyieglqallrd/ttnadrRkaaTmRErrRlskvneafetlkrstssnpnqrlpkveilrnairyieglqallrd >1mdy_C:HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MYOD BHLH DOMAIN BOUND TO DNA: PERSPECTIVES ON DNA RECOGNITION AND IMPLICATIONS FOR TRANSCRIPTIONAL ACTIVATION organism=MUS MUSCULUS DNA sequence DT(G29):DA(H56) DC(G30):DG(H55) DA(G31):DT(H54) DA(G32):DT(H53) DC(G33):DG(H52) DA(G34):DT(H51) DG(G35):DC(H50) DC(G36):DG(H49) DT(G37):DA(H48) DG(G38):DC(H47) DT(G39):DA(H46) DT(G40):DA(H45) DG(G41):DC(H44) DA(G42):DT(H43) chainC ( 7) ARG111 0 0 0 0 7 3 0 0 0 0 0 0 0 0 ( 11) THR115 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 13) ARG117 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 14) GLU118 0 0 0 1 10 8 0 0 0 0 0 0 0 0 ( 17) ARG121 0 0 0 2 7 0 0 0 0 0 0 0 0 0 prot.sequence ttnadrRkaaTmRErrRlskvneafetlkrstssnpnqrlpkveilrnairyieglqallrd >1mdy_CD: title=CRYSTAL STRUCTURE OF MYOD BHLH DOMAIN BOUND TO DNA: PERSPECTIVES ON DNA RECOGNITION AND IMPLICATIONS FOR TRANSCRIPTIONAL ACTIVATION organism=MUS MUSCULUS DNA sequence DT(H43):DA(G42) DC(H44):DG(G41) DA(H45):DT(G40) DA(H46):DT(G39) DC(H47):DG(G38) DA(H48):DT(G37) DG(H49):DC(G36) DC(H50):DG(G35) DT(H51):DA(G34) DG(H52):DC(G33) DT(H53):DA(G32) DT(H54):DA(G31) DG(H55):DC(G30) DA(H56):DT(G29) chainC ( 7) ARG111 0 0 0 0 0 0 0 0 3 7 0 0 0 0 ( 11) THR115 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 13) ARG117 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 14) GLU118 0 0 0 0 0 0 0 0 8 10 1 0 0 0 ( 17) ARG121 0 0 0 0 0 0 0 0 0 7 2 0 0 0 chainD ( 7) ARG111 0 0 0 0 6 8 0 0 0 0 0 0 0 0 ( 13) ARG117 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 14) GLU118 0 0 0 2 10 6 0 0 0 0 0 0 0 0 ( 17) ARG121 0 0 0 2 7 0 0 0 0 0 0 0 0 0 prot.sequence ttnadrRkaaTmRErrRlskvneafetlkrstssnpnqrlpkveilrnairyieglqallrd/ttnadrRkaatmRErrRlskvneafetlkrstssnpnqrlpkveilrnairyieglqallrd >1mey_C:C2H2_and_C2HC_zinc_fingers; title=CRYSTAL STRUCTURE OF A DESIGNED ZINC FINGER PROTEIN BOUND TO DNA organism=? DNA sequence DA(E2):DT(D13) DG(E3):DC(D12) DT(E4):DA(D11) DT(E5):DA(D10) DC(E6):DG(D9) DT(E7):DA(D8) DG(E8):DC(D7) DC(E9):DG(D6) DC(E10):DG(D5) DT(E11):DA(D4) DA(B13):DG(D3) DA(E13):DT(D2) DT(B1):DA(D1) DA(B2):DT(A13) DG(B3):DC(A12) DT(B4):DA(A11) DT(B5):DA(A10) DC(B6):DG(A9) DT(B7):DA(A8) DG(B8):DC(A7) DC(B9):DG(A6) DC(B10):DG(A5) DT(B11):DA(A4) DA(B13):DG(A3) chainC ( 15) GLN16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 9 0 0 0 0 0 0 0 ( 17) SER18 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 2 0 0 0 0 0 0 0 0 ( 18) ASN19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 7 0 0 0 0 0 0 ( 21) LYS22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 7 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 10 0 0 0 0 ( 44) SER45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 45) SER46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 1 0 0 0 0 0 ( 46) ASP47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 ( 49) LYS50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 ( 71) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 5 0 ( 73) ASP74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 2 0 0 ( 74) HIS75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 ( 77) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 prot.sequence ekpykcpecgksfsQsSNlqKhqrthtgekpykcpecgksfsQsSDlqKhqrthtgekpykcpecgksfsRsDHlsRhqrthq >1mey_CF:C2H2_and_C2HC_zinc_fingers; title=CRYSTAL STRUCTURE OF A DESIGNED ZINC FINGER PROTEIN BOUND TO DNA organism=? DNA sequence DG(A3):DA(B13) DA(A4):DT(B11) DG(A5):DC(B10) DG(A6):DC(B9) DC(A7):DG(B8) DA(A8):DT(B7) DG(A9):DC(B6) DA(A10):DT(B5) DA(A11):DT(B4) DC(A12):DG(B3) DT(A13):DA(B2) DA(D1):DT(B1) DT(D2):DA(E13) DG(D3):DA(B13) DA(D4):DT(E11) DG(D5):DC(E10) DG(D6):DC(E9) DC(D7):DG(E8) DA(D8):DT(E7) DG(D9):DC(E6) DA(D10):DT(E5) DA(D11):DT(E4) DC(D12):DG(E3) DT(D13):DA(E2) chainC ( 15) GLN16 0 0 0 0 0 0 0 9 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) SER18 0 0 0 0 0 0 0 0 2 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ASN19 0 0 0 0 0 0 7 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LYS22 0 0 0 0 0 7 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 10 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) SER45 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) SER46 0 0 0 0 0 1 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASP47 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS50 0 0 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG72 0 5 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ASP74 0 0 2 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) HIS75 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG78 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 16) GLN16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 0 0 ( 18) SER18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 2 ( 19) ASN19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 1 0 0 ( 22) LYS22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 2 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 ( 45) SER45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 46) SER46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 4 0 0 0 ( 47) ASP47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 2 0 0 0 0 0 ( 50) LYS50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 15 2 0 0 0 0 0 0 0 ( 74) ASP74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 ( 75) HIS75 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 19 14 2 0 0 0 0 0 0 0 0 0 prot.sequence ekpykcpecgksfsQsSNlqKhqrthtgekpykcpecgksfsQSSDlqKhqrthtgekpykcpecgksfsRsDHlsRhqrthq/mekpykcpecgksfsQsSNlqKhqrthtgekpykcpecgksfsQSSDlqKhqrthtgekpykcpecgksfsRsDHlsRhqrthq >1mhd_AB:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF A SMAD MH1 DOMAIN BOUND TO DNA organism=HOMO SAPIENS DNA sequence DC(C1001):DG(D2013) DA(C1002):DT(D2012) DG(C1003):DC(D2011) DT(C1004):DA(D2010) DC(C1005):DG(D2009) DT(C1006):DA(D2008) DA(C1007):DT(D2007) DG(C1008):DC(D2006) DA(C1009):DT(D2005) DC(C1010):DG(D2004) DA(C1011):DT(D2003) DT(C1012):DA(D2002) DA(C1013):DT(D2001) chainA ( 65) ARG74 0 0 0 0 0 0 0 0 2 13 16 0 0 ( 67) GLN76 0 0 0 0 0 5 9 2 0 0 0 0 0 ( 72) LYS81 0 0 0 0 0 0 4 7 3 0 0 0 0 chainB ( 65) ARG74 0 9 11 1 0 0 0 0 0 0 0 0 0 ( 67) GLN76 0 0 0 0 2 8 5 0 0 0 0 0 0 ( 72) LYS81 0 0 0 4 6 4 0 0 0 0 0 0 0 prot.sequence pivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvshrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet/pivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvshrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet >1mhd_B:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF A SMAD MH1 DOMAIN BOUND TO DNA organism=HOMO SAPIENS DNA sequence DC(C1001):DG(D2013) DA(C1002):DT(D2012) DG(C1003):DC(D2011) DT(C1004):DA(D2010) DC(C1005):DG(D2009) DT(C1006):DA(D2008) DA(C1007):DT(D2007) DG(C1008):DC(D2006) DA(C1009):DT(D2005) DC(C1010):DG(D2004) DA(C1011):DT(D2003) DT(C1012):DA(D2002) DA(C1013):DT(D2001) chainB ( 65) ARG74 0 9 11 1 0 0 0 0 0 0 0 0 0 ( 67) GLN76 0 0 0 0 2 8 5 0 0 0 0 0 0 ( 72) LYS81 0 0 0 4 6 4 0 0 0 0 0 0 0 prot.sequence pivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvshrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet >1mht_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=COVALENT TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE, DNA AND S- ADENOSYL-L-HOMOCYSTEINE organism=Haemophilus haemolyticus DNA sequence DG(B402):DC(C433) DA(B403):DT(C432) DT(B404):DA(C431) DA(B405):DT(C430) DG(B406):DC(C429) C36(B407):DG(C428) DC(B409):DG(C426) DT(B410):DA(C425) DA(B411):DT(C424) DT(B412):DA(C423) DC(B413):DG(C422) chainA ( 86) ILE86 0 0 0 0 0 0 1 3 3 0 0 ( 87) SER87 0 0 0 0 0 8 5 0 0 0 0 (237) GLN237 0 0 0 0 0 23 28 0 0 0 0 (239) GLU239 0 0 0 0 0 4 0 0 0 0 0 (240) ARG240 0 0 0 0 0 0 8 5 0 0 0 (252) SER252 0 0 0 0 0 1 0 0 0 0 0 (254) TYR254 0 0 0 0 1 0 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvrlgivgkggQgeRiystrgiaitlSaYgggifaktggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy >1mj2_A:Ribbon-helix-helix; title=METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO A CONSENSUS OPERATOR SEQUENCE organism=Escherichia coli DNA sequence DT(F0):DA(G17) DA(F1):DT(G16) DG(F2):DC(G15) DA(F3):DT(G14) DC(F4):DG(G13) DG(F5):DC(G12) DT(F6):DA(G11) DC(F7):DG(G10) DT(F8):DA(G9) DA(F9):DT(G8) DG(F10):DC(G7) DA(F11):DT(G6) DC(F12):DG(G5) DG(F13):DC(G4) DT(F14):DA(G3) DC(F15):DG(G2) DT(F16):DA(G1) DA(F17):DT(G0) chainA ( 23) LYS23 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 ( 25) THR25 0 0 3 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) SER27 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey >1mj2_ABCD:Ribbon-helix-helix; title=METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO A CONSENSUS OPERATOR SEQUENCE organism=Escherichia coli DNA sequence DT(G0):DA(F17) DA(G1):DT(F16) DG(G2):DC(F15) DA(G3):DT(F14) DC(G4):DG(F13) DG(G5):DC(F12) DT(G6):DA(F11) DC(G7):DG(F10) DT(G8):DA(F9) DA(G9):DT(F8) DG(G10):DC(F7) DA(G11):DT(F6) DC(G12):DG(F5) DG(G13):DC(F4) DT(G14):DA(F3) DC(G15):DG(F2) DT(G16):DA(F1) DA(G17):DT(F0) chainA ( 23) LYS23 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 ( 25) THR25 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 3 0 0 ( 27) SER27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainB ( 23) LYS23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 ( 25) THR25 0 0 0 0 0 0 0 0 0 0 7 9 3 0 0 0 0 0 ( 27) SER27 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainC ( 23) LYS23 0 0 0 0 0 0 0 11 6 0 0 0 0 0 0 0 0 0 ( 25) THR25 0 0 3 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) SER27 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 23) LYS23 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) THR25 0 0 0 0 0 1 10 5 0 0 0 0 0 0 0 0 0 0 ( 27) SER27 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey >1mjm_AB:Ribbon-helix-helix; title=METHIONINE APOREPRESSOR MUTANT (Q44K) COMPLEXED TO HALF OF THE CONSENSUS OPERATOR SEQUENCE organism=Escherichia coli DNA sequence DG(D411):DC(C410) DA(D412):DT(C409) DG(D413):DC(C408) DA(D414):DT(C407) DC(D415):DG(C406) DG(D416):DC(C405) DT(D417):DA(C404) DC(D418):DG(C403) DT(D419):DA(C402) DC(D420):DG(C401) chainA ( 23) LYS23 0 7 8 0 0 0 0 0 0 0 ( 25) THR25 0 0 0 0 0 4 7 3 0 0 chainB ( 23) LYS23 0 0 0 0 0 0 0 10 7 0 ( 25) THR25 0 0 4 9 4 0 0 0 0 0 prot.sequence aewsgeyispyaehgkkseqvkKiTvsiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvsiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey >1mjm_B:Ribbon-helix-helix; title=METHIONINE APOREPRESSOR MUTANT (Q44K) COMPLEXED TO HALF OF THE CONSENSUS OPERATOR SEQUENCE organism=Escherichia coli DNA sequence DG(D411):DC(C410) DA(D412):DT(C409) DG(D413):DC(C408) DA(D414):DT(C407) DC(D415):DG(C406) DG(D416):DC(C405) DT(D417):DA(C404) DC(D418):DG(C403) DT(D419):DA(C402) DC(D420):DG(C401) chainB ( 23) LYS23 0 0 0 0 0 0 0 10 7 0 ( 25) THR25 0 0 4 9 4 0 0 0 0 0 prot.sequence aewsgeyispyaehgkkseqvkKiTvsiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey >1mjo_ABCD:Ribbon-helix-helix; title=METHIONINE HOLOREPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO THE MINIMAL MET CONSENSUS OPERATOR WITH THE CENTRAL TA STEP MUTATED TO AT organism=Escherichia coli DNA sequence DT(G0):DA(F17) DA(G1):DT(F16) DG(G2):DC(F15) DA(G3):DT(F14) DC(G4):DG(F13) DG(G5):DC(F12) DT(G6):DA(F11) DC(G7):DG(F10) DA(G8):DT(F9) DT(G9):DA(F8) DG(G10):DC(F7) DA(G11):DT(F6) DC(G12):DG(F5) DG(G13):DC(F4) DT(G14):DA(F3) DC(G15):DG(F2) DT(G16):DA(F1) DA(G17):DT(F0) chainA ( 23) LYS23 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 ( 25) THR25 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 3 0 0 ( 27) SER27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainB ( 23) LYS23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 ( 25) THR25 0 0 0 0 0 0 0 0 0 0 7 10 1 0 0 0 0 0 chainC ( 23) LYS23 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 ( 25) THR25 0 0 1 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) SER27 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 23) LYS23 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) THR25 0 0 0 0 0 2 10 6 0 0 0 0 0 0 0 0 0 0 ( 27) SER27 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvsiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey >1mjo_B:Ribbon-helix-helix; title=METHIONINE HOLOREPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO THE MINIMAL MET CONSENSUS OPERATOR WITH THE CENTRAL TA STEP MUTATED TO AT organism=Escherichia coli DNA sequence DT(G0):DA(F17) DA(G1):DT(F16) DG(G2):DC(F15) DA(G3):DT(F14) DC(G4):DG(F13) DG(G5):DC(F12) DT(G6):DA(F11) DC(G7):DG(F10) DA(G8):DT(F9) DT(G9):DA(F8) DG(G10):DC(F7) DA(G11):DT(F6) DC(G12):DG(F5) DG(G13):DC(F4) DT(G14):DA(F3) DC(G15):DG(F2) DT(G16):DA(F1) DA(G17):DT(F0) chainB ( 23) LYS23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 ( 25) THR25 0 0 0 0 0 0 0 0 0 0 7 10 1 0 0 0 0 0 prot.sequence aewsgeyispyaehgkkseqvkKiTvsiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey >1mjp_A:Ribbon-helix-helix; title=METHIONINE APOREPRESSOR MUTANT (Q44K) COMPLEXED TO THE MINIMAL MET CONSENSUS OPERATOR organism=Escherichia coli DNA sequence DA(D1):DT(C10) DG(D2):DC(C9) DA(D3):DT(C8) DC(D4):DG(C7) DG(D5):DC(C6) DT(D6):DA(C5) DC(D7):DG(C4) DT(D8):DA(C3) DA(D9):DT(C2) chainA ( 23) LYS23 8 9 0 0 0 0 0 0 0 ( 25) THR25 0 0 0 1 3 2 0 0 0 ( 27) SER27 0 0 0 0 0 0 0 1 0 prot.sequence aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey >1mjp_AB:Ribbon-helix-helix; title=METHIONINE APOREPRESSOR MUTANT (Q44K) COMPLEXED TO THE MINIMAL MET CONSENSUS OPERATOR organism=Escherichia coli DNA sequence DT(C2):DA(D9) DA(C3):DT(D8) DG(C4):DC(D7) DA(C5):DT(D6) DC(C6):DG(D5) DG(C7):DC(D4) DT(C8):DA(D3) DC(C9):DG(D2) DT(C10):DA(D1) chainA ( 23) LYS23 0 0 0 0 0 0 0 9 8 ( 25) THR25 0 0 0 2 3 1 0 0 0 ( 27) SER27 0 1 0 0 0 0 0 0 0 chainB ( 23) LYS23 0 4 8 0 0 0 0 0 0 ( 25) THR25 0 0 0 0 0 3 9 2 0 ( 27) SER27 0 0 0 0 0 0 0 0 1 prot.sequence aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey >1mjq_A:Ribbon-helix-helix; title=METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO AN ALTERED MET CONSENSUS OPERATOR SEQUENCE organism=Escherichia coli DNA sequence DT(E0):DA(F17) DA(E1):DT(F16) DG(E2):DC(F15) DA(E3):DT(F14) DT(E4):DA(F13) DA(E5):DT(F12) DT(E6):DA(F11) DC(E7):DG(F10) DT(E8):DA(F9) DA(E9):DT(F8) DG(E10):DC(F7) DA(E11):DT(F6) DT(E12):DA(F5) DA(E13):DT(F4) DT(E14):DA(F3) DC(E15):DG(F2) DT(E16):DA(F1) DA(E17):DT(F0) chainA ( 23) LYS23 0 0 0 0 0 0 0 12 6 0 0 0 0 0 0 0 0 0 ( 25) THR25 0 0 1 4 7 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) SER27 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey >1mjq_ABCD:Ribbon-helix-helix; title=METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO AN ALTERED MET CONSENSUS OPERATOR SEQUENCE organism=Escherichia coli DNA sequence DT(F0):DA(E17) DA(F1):DT(E16) DG(F2):DC(E15) DA(F3):DT(E14) DT(F4):DA(E13) DA(F5):DT(E12) DT(F6):DA(E11) DC(F7):DG(E10) DT(F8):DA(E9) DA(F9):DT(E8) DG(F10):DC(E7) DA(F11):DT(E6) DT(F12):DA(E5) DA(F13):DT(E4) DT(F14):DA(E3) DC(F15):DG(E2) DT(F16):DA(E1) DA(F17):DT(E0) chainA ( 23) LYS23 0 0 0 0 0 0 0 0 0 6 12 0 0 0 0 0 0 0 ( 25) THR25 0 0 0 0 0 0 0 0 0 0 0 0 1 7 4 1 0 0 ( 27) SER27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainB ( 23) LYS23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 6 0 ( 25) THR25 0 0 0 0 0 0 0 0 0 0 5 9 4 0 0 0 0 0 chainC ( 23) LYS23 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 ( 25) THR25 0 0 2 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) SER27 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 23) LYS23 0 8 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) THR25 0 0 0 0 0 4 10 5 0 0 0 0 0 0 0 0 0 0 ( 27) SER27 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvsiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey >1mjq_GHIJ:Ribbon-helix-helix; title=METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO AN ALTERED MET CONSENSUS OPERATOR SEQUENCE organism=Escherichia coli DNA sequence DT(L0):DA(K17) DA(L1):DT(K16) DG(L2):DC(K15) DA(L3):DT(K14) DT(L4):DA(K13) DA(L5):DT(K12) DT(L6):DA(K11) DC(L7):DG(K10) DT(L8):DA(K9) DA(L9):DT(K8) DG(L10):DC(K7) DA(L11):DT(K6) DT(L12):DA(K5) DA(L13):DT(K4) DT(L14):DA(K3) DC(L15):DG(K2) DT(L16):DA(K1) DA(L17):DT(K0) chainG ( 23) LYS23 0 0 0 0 0 0 0 0 0 7 12 1 0 0 0 0 0 0 ( 25) THR25 0 0 0 0 0 0 0 0 0 0 0 0 1 7 4 2 0 0 ( 27) SER27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainH ( 23) LYS23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 7 0 ( 25) THR25 0 0 0 0 0 0 0 0 0 0 5 12 4 0 0 0 0 0 ( 27) SER27 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainI ( 23) LYS23 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 ( 25) THR25 0 0 3 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) SER27 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 23) LYS23 0 9 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) THR25 0 0 0 0 0 4 12 5 0 0 0 0 0 0 0 0 0 0 ( 27) SER27 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey/aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey >1mm8_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF TN5 TRANSPOSASE COMPLEXED WITH ME DNA organism=Escherichia coli DNA sequence DG(B101):DC(C220) DA(B102):DT(C219) DG(B103):DC(C218) DA(B104):DT(C217) DT(B105):DA(C216) DG(B106):DC(C215) DT(B107):DA(C214) DG(B108):DC(C213) DT(B109):DA(C212) DA(B110):DT(C211) DT(B111):DA(C210) DA(B112):DT(C209) DA(B113):DT(C208) DG(B114):DC(C207) DA(B115):DT(C206) DG(B116):DC(C205) DA(B117):DT(C204) DC(B118):DG(C203) chainA (238) PRO242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (239) GLN243 0 0 0 0 0 0 0 0 0 0 0 0 0 15 11 0 0 0 (240) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 13 (251) ASN255 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (252) ARG256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (319) TRP323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (326) LYS330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 (416) SER438 0 0 0 0 0 0 0 0 0 0 0 0 2 6 6 0 0 0 (417) LYS439 0 0 0 0 0 0 0 0 0 0 0 0 12 10 8 0 0 0 (418) ARG440 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 prot.sequence alhraadwaksvfssaalgdprrtarlvnvaaqlakysgksitissegskaaqegayrfirnpnvsaeairkagamqtvklaqefpellaiedttslsyrhqvaeelgklgsiqdksrgwwvhsvllleattfrtvgllhqewwmrpddpadadekesgkwlaaaatsrlrmgsmmsnviavcdreadihaylqdklahnerfvvrskhprkdvesglylydhlknqpelggyqisiPQKgvvdkrgkrkNRparkaslslrsgritlkqgnitlnavlaeeinppkgetplkwllltsepveslaqalrvidiythrWrieefhKawktgagaerqrmekpdnlermvsilsfvavrllqlresftpqsaetvltpdecqllgyldkgkrkrkekagslqwaymaiarlggfmdSKRtgiaswgalwegwealqskldgflaakdlmaqgikig >1mnm_A:SRF-like; title=YEAST MATALPHA2/MCM1/DNA TERNARY TRANSCRIPTION COMPLEX CRYSTAL STRUCTURE organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(E2):DT(F52) DT(E3):DA(F51) DT(E4):DA(F50) DA(E5):DT(F49) DC(E6):DG(F48) DC(E7):DG(F47) DT(E8):DA(F46) DA(E9):DT(F45) DA(E10):DT(F44) DT(E11):DA(F43) DA(E12):DT(F42) DG(E13):DC(F41) DG(E14):DC(F40) DG(E15):DC(F39) DA(E16):DT(F38) DA(E17):DT(F37) DA(E18):DT(F36) DT(E19):DA(F35) DT(E20):DA(F34) DT(E21):DA(F33) DA(E22):DT(F32) DC(E23):DG(F31) DA(E24):DT(F30) DC(E25):DG(F29) DG(E26):DC(F28) chainA ( 5) ARG19 0 0 0 0 0 21 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) THR30 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL34 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS38 0 0 0 1 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qkerRkieikfienkTrrhVtfsKrkhgimkkafelsvltgtqvlllvvsetglvytfstpkfepivtqqegrnliqaclnapdd >1mnm_ABCD:SRF-like;Homeodomain-like; title=YEAST MATALPHA2/MCM1/DNA TERNARY TRANSCRIPTION COMPLEX CRYSTAL STRUCTURE organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(E2):DT(F52) DT(E3):DA(F51) DT(E4):DA(F50) DA(E5):DT(F49) DC(E6):DG(F48) DC(E7):DG(F47) DT(E8):DA(F46) DA(E9):DT(F45) DA(E10):DT(F44) DT(E11):DA(F43) DA(E12):DT(F42) DG(E13):DC(F41) DG(E14):DC(F40) DG(E15):DC(F39) DA(E16):DT(F38) DA(E17):DT(F37) DA(E18):DT(F36) DT(E19):DA(F35) DT(E20):DA(F34) DT(E21):DA(F33) DA(E22):DT(F32) DC(E23):DG(F31) DA(E24):DT(F30) DC(E25):DG(F29) DG(E26):DC(F28) chainA ( 5) ARG19 0 0 0 0 0 21 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) THR30 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL34 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS38 0 0 0 1 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 1) ARG18 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 ( 20) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 ( 21) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 11 6 7 4 0 0 0 0 0 0 0 0 0 chainC ( 20) ARG132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 12 6 0 0 0 ( 23) ARG135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 6 0 0 0 0 0 0 ( 66) ASN178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 69) SER181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 ( 70) ASN182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 3 0 0 0 ( 73) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 11 0 0 chainD ( 19) TYR131 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG135 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN178 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN182 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG185 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qkerRkieikfienkTrrhVtfsKrkhgimkkafelsvltgtqvlllvvsetglvytfstpkfepivtqqegrnliqaclnapdd/RrkieikfienktrrhVtfSKrkhgimkkafelsvltgtqvlllvvsetglvytfstpkfepivtqqegrnliqaclnapd/glvfnvvtqdminkstkpyRghRftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvSNrrRkekt/glvfnvvtqdminkstkpYrghRftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvsNrrRkekt >1mnm_C:Homeodomain-like; title=YEAST MATALPHA2/MCM1/DNA TERNARY TRANSCRIPTION COMPLEX CRYSTAL STRUCTURE organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(F28):DG(E26) DG(F29):DC(E25) DT(F30):DA(E24) DG(F31):DC(E23) DT(F32):DA(E22) DA(F33):DT(E21) DA(F34):DT(E20) DA(F35):DT(E19) DT(F36):DA(E18) DT(F37):DA(E17) DT(F38):DA(E16) DC(F39):DG(E15) DC(F40):DG(E14) DC(F41):DG(E13) DT(F42):DA(E12) DA(F43):DT(E11) DT(F44):DA(E10) DT(F45):DA(E9) DA(F46):DT(E8) DG(F47):DC(E7) DG(F48):DC(E6) DT(F49):DA(E5) DA(F50):DT(E4) DA(F51):DT(E3) DT(F52):DA(E2) chainC ( 20) ARG132 0 0 0 6 12 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG135 0 0 0 0 0 0 6 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN178 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER181 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN182 0 0 0 3 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG185 0 0 11 13 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence glvfnvvtqdminkstkpyRghRftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvSNrrRkekt >1mnn_A:p53-like_transcription_factors; title=STRUCTURE OF THE SPORULATION SPECIFIC TRANSCRIPTION FACTOR NDT80 BOUND TO DNA organism=Saccharomyces cerevisiae DNA sequence DG(B2):DC(C14) DC(B3):DG(C13) DG(B4):DC(C12) DA(B5):DT(C11) DC(B6):DG(C10) DA(B7):DT(C9) DC(B8):DG(C8) DA(B9):DT(C7) DA(B10):DT(C6) DA(B11):DT(C5) DA(B12):DT(C4) DA(B13):DT(C3) DC(B14):DG(C2) chainA ( 25) PRO57 0 0 0 0 0 0 6 4 1 0 0 0 0 ( 26) ARG58 0 0 0 0 0 0 0 0 10 7 1 0 0 ( 79) ARG111 0 0 0 4 13 22 0 0 0 0 0 0 0 ( 80) ASN112 0 0 0 0 0 1 0 0 0 0 0 0 0 (139) ARG177 0 0 0 0 0 7 12 21 0 0 0 0 0 (140) ASP178 0 0 0 0 1 0 0 0 0 0 0 0 0 (281) ARG326 0 12 13 7 0 0 0 0 0 0 0 0 0 prot.sequence viltqlnedgttsnyfdkrklkiaPRstlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykRNyftlvstfetancdldtflkssfdllvgrlrvqyfaikikaknddddteinlvqhtakRDkgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvilgavvdpdgipydelalkngskgmfvylqemktppliirgRspsnyassq >1mow_A:Homing_endonucleases; title=E-DREI organism=? DNA sequence DC(C401):DG(B323) DG(C402):DC(B322) DC(C403):DG(B321) DC(C404):DG(B320) DG(C405):DC(B319) DG(C406):DC(B318) DA(C407):DT(B317) DA(C408):DT(B316) DC(C409):DG(B315) DT(C410):DA(B314) DT(C411):DA(B313) DG(C412):DC(B312) DA(C413):DT(B311) DG(C414):DC(B310) DA(C415):DT(B309) DC(C416):DG(B308) DA(C417):DT(B307) DG(C418):DC(B306) DT(C419):DA(B305) DT(C420):DA(B304) DT(C421):DA(B303) DG(C422):DC(B302) DG(C423):DC(B301) chainA ( 21) TYR25 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) TYR29 0 0 2 3 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG33 5 15 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER34 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) GLU35 0 0 4 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG37 0 0 0 0 6 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR41 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL72 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASP75 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR76 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 0 0 0 0 6 15 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 6 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) SER83 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) SER119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (117) ILE121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 (119) GLN123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 (121) LYS125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 (123) ASN127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (125) SER129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 (126) TYR130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 18 0 (131) GLN135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 4 0 0 (137) GLN141 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 (139) THR143 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (159) TYR163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (161) ARG165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 15 0 0 0 0 0 0 (163) ARG167 0 0 0 0 0 0 0 0 0 0 0 0 0 12 14 0 0 0 0 0 0 0 0 (166) VAL170 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (233) THR237 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 prot.sequence envsgisayllgliwgdgglYkLkYkgnRSEyRvviTqksenlikqfiaprmqflidelnvkskiQiVkgDTRyElRvSskklyyyfanmlerirlfngnrflaylagivdgdgSiIaQiKpNqSYkfkhQlsltfQvTqkterrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflnfkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravldsl >1mq2_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA COMPLEXED WITH GAPPED DNA CONTAINING AN 8- OXO-7,8-DIHYDRO-GUANINE AND DAMP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 30 ( 26) LYS35 0 0 0 0 8 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1mq3_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA COMPLEXED WITH GAPPED DNA CONTAINING AN 8- OXO-7,8-DIHYDRO-GUANINE TEMPLATE PAIRED WITH DCTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 43 0 0 0 0 ( 26) LYS35 7 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1mse_C:Homeodomain-like; title=SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES organism=MUS MUSCULUS DNA sequence DC(A1):DG(B32) DC(A2):DG(B31) DT(A3):DA(B30) DA(A4):DT(B29) DA(A5):DT(B28) DC(A6):DG(B27) DT(A7):DA(B26) DG(A8):DC(B25) DA(A9):DT(B24) DC(A10):DG(B23) DA(A11):DT(B22) chainC ( 40) LYS128 0 0 0 0 0 0 12 11 6 0 0 ( 43) ARG131 0 0 0 0 0 0 0 9 7 0 0 ( 44) GLU132 0 0 0 0 0 13 7 5 0 0 0 ( 48) ASN136 0 0 0 6 0 0 0 0 0 0 0 ( 90) ASP178 0 0 0 0 0 0 3 3 0 0 0 ( 91) ASN179 0 0 0 0 0 1 0 0 0 0 0 ( 94) LYS182 0 0 0 0 0 9 11 0 0 0 0 ( 95) ASN183 0 0 20 14 1 0 0 0 0 0 0 ( 98) ASN186 0 0 0 0 4 0 0 0 0 0 0 ( 99) SER187 0 3 7 1 0 0 0 0 0 0 0 (100) THR188 0 2 0 0 0 0 0 0 0 0 0 prot.sequence mlikgpwtkeedqrviklvqkygpkrwsviakhlkgrigKqcRErwhNhlnpevkktswteeedriiyqahkrlgnrwaeiakllpgrtDNaiKNhwNSTmrrkv >1msf_C:Homeodomain-like; title=SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES organism=MUS MUSCULUS DNA sequence DC(A1):DG(B32) DC(A2):DG(B31) DT(A3):DA(B30) DA(A4):DT(B29) DA(A5):DT(B28) DC(A6):DG(B27) DT(A7):DA(B26) DG(A8):DC(B25) DA(A9):DT(B24) DC(A10):DG(B23) DA(A11):DT(B22) chainC ( 40) LYS128 0 0 0 0 0 0 6 0 0 0 0 ( 43) ARG131 0 0 0 0 0 3 1 0 3 0 0 ( 44) GLU132 0 0 0 0 0 8 4 0 0 0 0 ( 48) ASN136 0 0 0 6 0 0 0 0 0 0 0 ( 90) ASP178 0 0 0 0 0 0 1 3 0 0 0 ( 91) ASN179 0 0 0 0 4 5 0 0 0 0 0 ( 94) LYS182 0 0 0 0 0 11 10 0 0 0 0 ( 95) ASN183 0 0 12 11 3 0 0 0 0 0 0 ( 96) HIS184 0 0 1 0 0 0 0 0 0 0 0 ( 98) ASN186 0 0 0 0 3 0 0 0 0 0 0 ( 99) SER187 0 4 2 1 0 0 0 0 0 0 0 (100) THR188 1 2 0 0 0 0 0 0 0 0 0 prot.sequence mlikgpwtkeedqrviklvqkygpkrwsviakhlkgrigKqcRErwhNhlnpevkktswteeedriiyqahkrlgnrwaeiakllpgrtDNaiKNHwNSTmrrkv >1msw_D:DNA/RNA_polymerases; title=STRUCTURAL BASIS FOR THE TRANSITION FROM INITIATION TO ELONGATION TRANSCRIPTION IN T7 RNA POLYMERASE organism=Enterobacteria phage T7 DNA sequence DG(T130):DC(N30) DC(T129):DG(N29) DG(N28):DG(T127) DC(T128):DC(N27) DT(T126):DA(N26) DC(T124):DG(N24) DG(T123):DC(N23) DC(T122):DG(N22) DA(T121):DT(N21) chainD (163) LYS164 0 0 0 0 0 0 0 0 2 (582) THR602 0 0 0 0 0 0 1 0 0 (624) PHE644 0 0 0 0 0 0 0 0 31 (627) ARG647 0 0 0 0 0 0 0 0 2 prot.sequence ntiniakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmferqlkagevadnaaakplittllpkmiarindwfeevkakrgkrptafqflqeikpeavayitikttlacltsadnttvqavasaigraiedearfgrirdleakhfkKnveeqlnkrvghvykkafmqvveadmlskgllggeawsswhkedsihvgvrciemliestgmvslhrqsetielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiereelpmktawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvtvtdenTgeisekvklgtkalagqwlaygvtrsvtkrsvmtlaygskeFgfRqqvledtiqpaidsgkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtrlnlmflgqfrlqptintnkdseidahkqesgiapnfvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa >1mtl_A:Uracil-DNA_glycosylase-like; title=NON-PRODUCTIVE MUG-DNA COMPLEX organism=Escherichia coli DNA sequence DC(C201):DG(D224) DG(C202):DC(D223) DC(C203):DG(D222) DG(C204):DC(D221) DA(C205):DT(D220) DG(C206):AAB(D219) AAB(C207):DG(D218) DT(C208):DA(D217) DC(C209):DG(D216) DG(C210):DC(D215) DC(C211):DG(D214) DG(C212):DC(D213) chainA ( 72) GLU79 1 0 0 0 0 0 0 0 0 0 0 0 (103) GLN110 0 0 1 6 14 0 0 0 0 0 0 0 (137) LEU144 9 0 0 0 0 0 0 0 0 0 0 0 (139) ARG146 5 10 2 0 0 0 0 0 0 0 0 0 prot.sequence vedilapglrvvfcginpglssagtgfpfahpanrfwkviyqagftdrqlkpqeaqhlldyrcgvtklvanEvskqelhaggrkliekiedyqpqalailgkQayeqgfsqrgaqwgkqtltigstqiwvlpnpsgLsRvsleklveayreldqalv >1mtl_AB:Uracil-DNA_glycosylase-like; title=NON-PRODUCTIVE MUG-DNA COMPLEX organism=Escherichia coli DNA sequence DC(C201):DG(D224) DG(C202):DC(D223) DC(C203):DG(D222) DG(C204):DC(D221) DA(C205):DT(D220) DG(C206):AAB(D219) AAB(C207):DG(D218) DT(C208):DA(D217) DC(C209):DG(D216) DG(C210):DC(D215) DC(C211):DG(D214) DG(C212):DC(D213) chainA ( 72) GLU79 1 0 0 0 0 0 0 0 0 0 0 0 (103) GLN110 0 0 1 6 14 0 0 0 0 0 0 0 (137) LEU144 9 0 0 0 0 0 0 0 0 0 0 0 (139) ARG146 5 10 2 0 0 0 0 0 0 0 0 0 chainB ( 32) HIS32 1 0 0 0 0 0 0 0 0 0 0 0 ( 33) PRO33 4 0 0 0 0 0 0 0 0 0 0 0 ( 34) ALA34 10 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG36 7 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vedilapglrvvfcginpglssagtgfpfahpanrfwkviyqagftdrqlkpqeaqhlldyrcgvtklvanEvskqelhaggrkliekiedyqpqalailgkQayeqgfsqrgaqwgkqtltigstqiwvlpnpsgLsRvsleklveayreldqalv/mvedilapglrvvfcginpglssagtgfpfaHPAnRfwkviyqagftdrqlkpqeaqhlldyrcgvtklvdrpnevskqelhaggrkliekiedyqpqalailgkqayeqgfsqrgaqwgkqtltigstqiwvlpnpsglsrvsleklveayreldqalv >1muh_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF TN5 TRANSPOSASE COMPLEXED WITH TRANSPOSON END DNA organism=Escherichia coli DNA sequence DG(C3):DC(B18) DA(C4):DT(B17) DC(C5):DG(B16) DT(C6):DA(B15) DC(C7):DG(B14) DT(C8):DA(B13) DT(C9):DA(B12) DA(C10):DT(B11) DT(C11):DA(B10) DA(C12):DT(B9) DC(C13):DG(B8) DA(C14):DT(B7) DC(C15):DG(B6) DA(C16):DT(B5) DA(C17):DT(B4) DG(C18):DC(B3) DT(C19):DA(B2) DC(C20):DG(B1) chainA (239) GLN243 0 0 0 9 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) LYS244 5 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) TRP323 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) LYS330 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (416) SER438 0 0 0 4 6 3 0 0 0 0 0 0 0 0 0 0 0 0 (417) LYS439 0 0 0 11 11 10 0 0 0 0 0 0 0 0 0 0 0 0 (418) ARG440 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 prot.sequence alhraadwaksvfssaalgdprrtarlvnvaaqlakysgksitissegskaaqegayrfirnpnvsaeairkagamqtvklaqefpellaiedttslsyrhqvaeelgklgsiqdksrgwwvhsvllleattfrtvgllhqewwmrpddpadadekesgkwlaaaatsrlrmgsmmsnviavcdreadihaylqdklahnerfvvrskhprkdvesglylydhlknqpelggyqisipQKgvvdkrgkrknrparkaslslrsgritlkqgnitlnavlaeeinppkgetplkwllltsepveslaqalrvidiythrWrieefhKawktgagaerqrmeepdnlermvsilsfvavrllqlresftpqsaetvltpdecqllgyldkgkrkrkekagslqwaymaiarlggfmdSKRtgiaswgalwegwealqskldgflaakdlmaqgikig >1mus_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF TN5 TRANSPOSASE COMPLEXED WITH RESOLVED OUTSIDE END DNA organism=Escherichia coli DNA sequence DG(B1):DC(C20) DA(B2):DT(C19) DC(B3):DG(C18) DT(B4):DA(C17) DT(B5):DA(C16) DG(B6):DC(C15) DT(B7):DA(C14) DG(B8):DC(C13) DT(B9):DA(C12) DA(B10):DT(C11) DT(B11):DA(C10) DA(B12):DT(C9) DA(B13):DT(C8) DG(B14):DC(C7) DA(B15):DT(C6) DG(B16):DC(C5) DT(B17):DA(C4) DC(B18):DG(C3) chainA (240) GLN243 0 0 0 0 0 0 0 0 0 0 0 0 0 15 10 1 0 0 (241) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 9 (244) VAL247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (327) LYS330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 (419) SER438 0 0 0 0 0 0 0 0 0 0 0 0 2 7 5 0 0 0 (420) LYS439 0 0 0 0 0 0 0 0 0 0 0 0 10 11 9 1 0 0 (421) ARG440 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence salhraadwaksvfssaalgdprrtarlvnvaaqlakysgksitissegskaaqegayrfirnpnvsaeairkagamqtvklaqefpellaiedttslsyrhqvaeelgklgsiqkasrgwwvhsvllleattfrtvgllhqewwmrpddpadadekesgkwlaaaatsrlrmgsmmsnviavcdreadihaylqdklahnerfvvrskhprkdvesglylydhlknqpelggyqisipQKgvVdkrgkrknrparkaslslrsgritlkqgnitlnavlaeeinppkgetplkwllltsepveslaqalrvidiythrwrieefhKawktgagaerqrmekpdnlermvsilsfvavrllqlresftppsqsaetvltpdecqllgyldkgkrkrkekagslqwaymaiarlggfmdSKRtgiaswgalwegwealqskldgflaakdlmaqgikig >1mwi_A:Uracil-DNA_glycosylase-like; title=CRYSTAL STRUCTURE OF A MUG-DNA PRODUCT COMPLEX organism=Escherichia coli DNA sequence DC(D1) DG(D2) DC(D3) DG(D4) DA(D5) DG(D6) DT(D8) DC(D9) DG(D10) DC(D11) DG(D12) chainA (144) LEU144 0 0 0 0 0 0 0 0 0 0 1 (146) ARG146 0 0 0 0 0 0 0 0 0 25 45 prot.sequence mvedilapglrvvfcginpglssagtgfpfahpanrfwkviyqagftdrqlkpqeaqhlldyrcgvtklvdrptvqanevskqelhaggrkliekiedyqpqalailgkqayeqgfsqrgaqwgkqtltigstqiwvlpnpsgLsRvsleklveayreldqalvv >1mwj_A:Uracil-DNA_glycosylase-like; title=CRYSTAL STRUCTURE OF A MUG-DNA PSEUDO SUBSTRATE COMPLEX organism=Escherichia coli DNA sequence DC(D1) DG(D2) DC(D3) DG(D4) DA(D5) DG(D6) DU(D7) DT(D8) DC(D9) DG(D10) DC(D11) DG(D12) chainA (146) ARG146 0 0 0 0 0 0 0 0 0 0 25 38 prot.sequence mvedilapglrvvfcginpglssagtgfpfahpanrfwkviyqagftdrqlkpqeaqhlldyrcgvtklvdrptvqanevskqelhaggrkliekiedyqpqalailgkqayeqgfsqrgaqwgkqtltigstqiwvlpnpsglsRvsleklveayreldqalvv >1n39_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURAL AND BIOCHEMICAL EXPLORATION OF A CRITICAL AMINO ACID IN HUMAN 8-OXOGUANINE GLYCOSYLASE organism=Homo sapiens DNA sequence DG(C16):DC(B15) DC(C17):DG(B14) DG(C18):DC(B13) DT(C19):DA(B12) DC(C20):DG(B11) DC(C21):DG(B10) DA(C22):DT(B9) 3DR(C23):DC(B8) DG(C24):DC(B7) DT(C25):DA(B6) DC(C26):DG(B5) DT(C27):DA(B4) DA(C28):DT(B3) DC(C29):DG(B2) DC(C30):DG(B1) chainA (138) ASN149 0 0 0 0 0 0 16 4 32 0 0 0 0 0 0 (139) ASN150 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (140) ASN151 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 (143) ARG154 0 0 0 0 0 0 30 12 0 0 0 0 0 0 0 (192) TYR203 0 0 0 0 0 0 0 16 8 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficssNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRaryvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvevhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwgpyagwaqavlfsadlrq >1n3a_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURAL AND BIOCHEMICAL EXPLORATION OF A CRITICAL AMINO ACID IN HUMAN 8-OXOGUANINE GLYCOSYLASE organism=Homo sapiens DNA sequence DG(B1):DC(C30) DG(B2):DC(C29) DT(B3):DA(C28) DA(B4):DT(C27) DG(B5):DC(C26) DA(B6):DT(C25) DC(B7):DG(C24) DC(B8):3DR(C23) DT(B9):DA(C22) DG(B10):DC(C21) DG(B11):DC(C20) DA(B12):DT(C19) DC(B13):DG(C18) DG(B14):DC(C17) DC(B15):DG(C16) chainA (138) ASN149 0 0 0 0 0 0 62 5 8 0 0 0 0 0 0 (139) ASN150 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (140) ASN151 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 (143) ARG154 0 0 0 0 0 0 0 11 12 0 0 0 0 0 0 (192) TYR203 0 0 0 0 0 0 20 15 0 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (196) TYR207 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (282) PRO293 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficssNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvqvhmwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaqavlfsadlrq >1n3c_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURAL AND BIOCHEMICAL EXPLORATION OF A CRITICAL AMINO ACID IN HUMAN 8-OXOGUANINE GLYCOSYLASE organism=Homo sapiens DNA sequence DG(C16):DC(B15) DC(C17):DG(B14) DG(C18):DC(B13) DT(C19):DA(B12) DC(C20):DG(B11) DC(C21):DG(B10) DA(C22):DT(B9) 8OG(C23):DC(B8) DG(C24):DC(B7) DT(C25):DA(B6) DC(C26):DG(B5) DT(C27):DA(B4) DA(C28):DT(B3) DC(C29):DG(B2) DC(C30):DG(B1) chainA ( 37) PHE45 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (133) PHE144 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (136) SER147 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (138) ASN149 0 0 0 0 0 0 14 5 34 0 0 0 0 0 0 (139) ASN150 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (140) ASN151 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 (141) ILE152 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (143) ARG154 0 0 0 0 0 0 26 10 0 0 0 0 0 0 0 (144) ILE155 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (192) TYR203 0 0 0 0 0 0 0 18 9 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (196) TYR207 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (238) LYS249 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (242) CYS253 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (246) MET257 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (255) PRO266 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (257) ASN268 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (304) GLN315 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (308) PHE319 0 0 0 0 0 0 0 39 0 0 0 0 0 0 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficssNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvnvhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwgpyagwaqavlfsadlrq >1n3e_ABGH:Homing_endonucleases; title=CRYSTAL STRUCTURE OF I-CREI BOUND TO A PALINDROMIC DNA SEQUENCE I (PALINDROME OF LEFT SIDE OF WILDTYPE DNA TARGET SEQUENCE) organism=Chlamydomonas reinhardtii DNA sequence DC(C401):DG(F474) DG(C402):DC(F473) DA(C403):DT(F472) DA(C404):DT(F471) DA(C405):DT(F470) DA(C406):DT(F469) DC(C407):DG(F468) DG(C408):DC(F467) DT(C409):DA(F466) DC(C410):DG(F465) DG(C411):DC(E464) DT(C412):DA(E463) DA(C413):DT(E462) DC(C414):DG(E461) DG(D415):DC(E460) DA(D416):DT(E459) DC(D417):DG(E458) DG(D418):DC(E457) DT(D419):DA(E456) DT(D420):DA(E455) DT(D421):DA(E454) DT(D422):DA(E453) DC(D423):DG(E452) DG(D424):DC(E451) DC(K951):DG(J924) DG(K952):DC(J923) DA(K953):DT(J922) DA(K954):DT(J921) DA(K955):DT(J920) DA(K956):DT(J919) DC(K957):DG(J918) DG(K958):DC(J917) DT(K959):DA(J916) DC(K960):DG(J915) DG(K961):DC(I914) DT(K962):DA(I913) DA(K963):DT(I912) DC(K964):DG(I911) DG(L965):DC(I910) DA(L966):DT(I909) DC(L967):DG(I908) DG(L968):DC(I907) DT(L969):DA(I906) DT(L970):DA(I905) DT(L971):DA(I904) DT(L972):DA(I903) DC(L973):DG(I902) DG(L974):DC(I901) chainA ( 20) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 20) SER222 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE224 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN226 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS228 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER232 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR233 0 8 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN238 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN244 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR246 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) TYR266 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG268 0 0 0 0 0 0 7 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG270 0 0 0 0 0 0 0 0 13 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL273 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) THR340 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 20) SER522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN544 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) TYR566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG570 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) THR640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 20) SER722 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 22) ILE724 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 24) GLN726 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 ( 26) LYS728 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 ( 30) SER732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 ( 31) TYR733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 9 0 ( 36) GLN738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 ( 42) GLN744 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 ( 44) THR746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 64) TYR766 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 66) ARG768 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 9 0 0 0 0 0 0 ( 68) ARG770 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 15 0 0 0 0 0 0 0 0 ( 71) VAL773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 (138) THR840 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 prot.sequence tkynkefllylagfvdgdgSiIaQiKpnqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld/tkynkefllylagfvdgdgSiIaQiKpnqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld/tkynkefllylagfvdgdgSiIaQiKpnqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld/tkynkefllylagfvdgdgSiIaQiKpnqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld >1n3e_G:Homing_endonucleases; title=CRYSTAL STRUCTURE OF I-CREI BOUND TO A PALINDROMIC DNA SEQUENCE I (PALINDROME OF LEFT SIDE OF WILDTYPE DNA TARGET SEQUENCE) organism=Chlamydomonas reinhardtii DNA sequence DC(I901):DG(L974) DG(I902):DC(L973) DA(I903):DT(L972) DA(I904):DT(L971) DA(I905):DT(L970) DA(I906):DT(L969) DC(I907):DG(L968) DG(I908):DC(L967) DT(I909):DA(L966) DC(I910):DG(L965) DG(I911):DC(K964) DT(I912):DA(K963) DA(I913):DT(K962) DC(I914):DG(K961) DG(J915):DC(K960) DA(J916):DT(K959) DC(J917):DG(K958) DG(J918):DC(K957) DT(J919):DA(K956) DT(J920):DA(K955) DT(J921):DA(K954) DT(J922):DA(K953) DC(J923):DG(K952) DG(J924):DC(K951) DC(E451):DG(D424) DG(E452):DC(D423) DA(E453):DT(D422) DA(E454):DT(D421) DA(E455):DT(D420) DA(E456):DT(D419) DC(E457):DG(D418) DG(E458):DC(D417) DT(E459):DA(D416) DC(E460):DG(D415) DG(E461):DC(C414) DT(E462):DA(C413) DA(E463):DT(C412) DC(E464):DG(C411) DG(F465):DC(C410) DA(F466):DT(C409) DC(F467):DG(C408) DG(F468):DC(C407) DT(F469):DA(C406) DT(F470):DA(C405) DT(F471):DA(C404) DT(F472):DA(C403) DC(F473):DG(C402) DG(F474):DC(C401) chainG ( 20) SER522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN544 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR546 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) TYR566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG570 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL573 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) THR640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tkynkefllylagfvdgdgSiIaQiKpnqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld >1n3f_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF I-CREI BOUND TO A PALINDROMIC DNA SEQUENCE II (PALINDROME OF RIGHT SIDE OF WILDTYPE DNA TARGET SEQUENCE) organism=Chlamydomonas reinhardtii DNA sequence DC(E451):DG(D424) DG(E452):DC(D423) DA(E453):DT(D422) DA(E454):DT(D421) DA(E455):DT(D420) DC(E456):DG(D419) DT(E457):DA(D418) DG(E458):DC(D417) DT(E459):DA(D416) DC(E460):DG(D415) DT(E461):DA(C414) DC(E462):DG(C413) DG(E463):DC(C412) DA(E464):DT(C411) DG(F465):DC(C410) DA(F466):DT(C409) DC(F467):DG(C408) DA(F468):DT(C407) DG(F469):DC(C406) DT(F470):DA(C405) DT(F471):DA(C404) DT(F472):DA(C403) DC(F473):DG(C402) DG(F474):DC(C401) chainA ( 20) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 22) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 24) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 ( 26) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 2 0 0 0 0 ( 28) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 ( 30) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 ( 31) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 15 0 ( 36) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 ( 42) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 ( 44) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 ( 64) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 66) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 11 0 0 0 0 0 0 ( 68) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 16 0 0 0 0 0 0 0 0 ( 71) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (137) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (138) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 prot.sequence tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvrav >1n3f_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF I-CREI BOUND TO A PALINDROMIC DNA SEQUENCE II (PALINDROME OF RIGHT SIDE OF WILDTYPE DNA TARGET SEQUENCE) organism=Chlamydomonas reinhardtii DNA sequence DC(C401):DG(F474) DG(C402):DC(F473) DA(C403):DT(F472) DA(C404):DT(F471) DA(C405):DT(F470) DC(C406):DG(F469) DT(C407):DA(F468) DG(C408):DC(F467) DT(C409):DA(F466) DC(C410):DG(F465) DT(C411):DA(E464) DC(C412):DG(E463) DG(C413):DC(E462) DA(C414):DT(E461) DG(D415):DC(E460) DA(D416):DT(E459) DC(D417):DG(E458) DA(D418):DT(E457) DG(D419):DC(E456) DT(D420):DA(E455) DT(D421):DA(E454) DT(D422):DA(E453) DC(D423):DG(E452) DG(D424):DC(E451) chainA ( 20) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE24 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN26 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS28 0 0 0 0 2 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASN30 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER32 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR33 0 15 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN38 0 0 4 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN44 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR46 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) TYR66 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG68 0 0 0 0 0 0 11 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG70 0 0 0 0 0 0 0 0 16 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL73 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 (137) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) THR140 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 20) SER222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 22) ILE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 24) GLN226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 ( 26) LYS228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 4 0 0 0 0 ( 28) ASN230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 ( 30) SER232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 ( 31) TYR233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 13 0 ( 36) GLN238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 3 0 0 ( 42) GLN244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 ( 44) THR246 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 ( 64) TYR266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 66) ARG268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 6 0 0 0 0 0 0 ( 68) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 14 0 0 0 0 0 0 0 0 ( 71) VAL273 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (137) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (138) THR340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvrav/tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvrav >1n3f_GH:Homing_endonucleases; title=CRYSTAL STRUCTURE OF I-CREI BOUND TO A PALINDROMIC DNA SEQUENCE II (PALINDROME OF RIGHT SIDE OF WILDTYPE DNA TARGET SEQUENCE) organism=Chlamydomonas reinhardtii DNA sequence DC(K951):DG(J924) DG(K952):DC(J923) DA(K953):DT(J922) DA(K954):DT(J921) DA(K955):DT(J920) DC(K956):DG(J919) DT(K957):DA(J918) DG(K958):DC(J917) DT(K959):DA(J916) DC(K960):DG(J915) DT(K961):DA(I914) DC(K962):DG(I913) DG(K963):DC(I912) DA(K964):DT(I911) DG(L965):DC(I910) DA(L966):DT(I909) DC(L967):DG(I908) DA(L968):DT(I907) DG(L969):DC(I906) DT(L970):DA(I905) DT(L971):DA(I904) DT(L972):DA(I903) DC(L973):DG(I902) DG(L974):DC(I901) chainG ( 20) SER522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 22) ILE524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 24) GLN526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 ( 26) LYS528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 3 0 0 0 0 ( 28) ASN530 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 30) SER532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 ( 31) TYR533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 20 0 ( 36) GLN538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 ( 42) GLN544 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 ( 44) THR546 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 64) TYR566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 66) ARG568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 7 0 0 0 0 0 0 ( 68) ARG570 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 20 0 0 0 0 0 0 0 0 ( 71) VAL573 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (137) LYS639 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (138) THR640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 chainH ( 20) SER722 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE724 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN726 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS728 0 0 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASN730 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER732 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR733 0 11 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN738 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN744 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR746 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) TYR766 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG768 0 0 0 0 0 0 9 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG770 0 0 0 0 0 0 0 0 17 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL773 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 (137) LYS839 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) THR840 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvrav/tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvrav >1n48_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=Y-FAMILY DNA POLYMERASE DPO4 IN COMPLEX WITH DNA CONTAINING ABASIC LESION organism=Sulfolobus solfataricus DNA sequence DT(C1906):ATP(B1814) DA(C1907):DT(B1812) DG(C1908):DC(B1811) DT(C1909):DA(B1810) DC(C1910):DG(B1809) DC(C1911):DG(B1808) DT(C1912):DA(B1807) DT(C1913):DA(B1806) DC(C1914):DG(B1805) DC(C1915):DG(B1804) DC(C1916):DG(B1803) DC(C1917):DG(B1802) DC(C1918):DG(B1801) chainA ( 7) ASP7 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) TYR10 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) TYR48 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG51 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 4 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP105 5 0 0 0 0 0 0 0 0 0 0 0 0 (106) GLU106 1 0 0 0 0 0 0 0 0 0 0 0 0 (159) LYS159 5 0 0 0 0 0 0 0 0 0 0 0 0 (243) LYS243 0 0 0 0 0 0 0 1 7 8 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrKsigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvrfskfie >1n56_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=Y-FAMILY DNA POLYMERASE DPO4 IN COMPLEX WITH DNA CONTAINING ABASIC LESION organism=Sulfolobus solfataricus DNA sequence DT(F1905):ATP(B1804) DA(F1907):DT(E1812) DG(F1908):DC(E1811) DT(F1909):DA(E1810) DC(F1910):DG(E1809) DC(F1911):DG(E1808) DT(F1912):DA(E1807) DT(F1913):DA(E1806) DC(F1914):DG(E1805) DC(F1915):ATP(B1804) DC(F1916):DG(E1803) DC(F1917):DG(E1802) DC(F1918):DG(E1801) chainB ( 7) ASP7 6 0 0 0 0 0 0 0 0 6 0 0 0 ( 9) ASP9 1 0 0 0 0 0 0 0 0 1 0 0 0 ( 10) TYR10 2 0 0 0 0 0 0 0 0 2 0 0 0 ( 11) PHE11 1 0 0 0 0 0 0 0 0 1 0 0 0 ( 32) VAL32 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA44 2 0 0 0 0 0 0 0 0 2 0 0 0 ( 45) THR45 4 0 0 0 0 0 0 0 0 4 0 0 0 ( 48) TYR48 5 0 0 0 0 0 0 0 0 5 0 0 0 ( 51) ARG51 11 0 0 0 0 0 0 0 0 11 0 0 0 ( 57) ALA57 4 0 0 0 0 0 0 0 0 4 0 0 0 ( 76) MET76 1 0 0 0 0 0 0 0 0 1 0 0 0 (105) ASP105 4 0 0 0 0 0 0 0 0 4 0 0 0 (106) GLU106 1 0 0 0 0 0 0 0 0 1 0 0 0 (159) LYS159 6 0 0 0 0 0 0 0 0 6 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeaKakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvrfskfi >1n5y_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO POST-TRANSLOCATION AZTMP- TERMINATED DNA (COMPLEX P) organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) ATM(P822):DA(T706) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 (184) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 (258) CYS258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (283) LEU283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (356) ARG356 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 (448) ARG448 0 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk/pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >1n6j_A:SRF-like; title=STRUCTURAL BASIS OF SEQUENCE-SPECIFIC RECRUITMENT OF HISTONE DEACETYLASES BY MYOCYTE ENHANCER FACTOR-2 organism=HOMO SAPIENS DNA sequence DA(C3):DT(D16) DG(C4):DC(D15) DC(C5):DG(D14) DT(C6):DA(D13) DA(C7):DT(D12) DT(C8):DA(D11) DT(C9):DA(D10) DT(C10):DA(D9) DA(C11):DT(D8) DT(C12):DA(D7) DA(C13):DT(D6) DA(C14):DT(D5) DG(C15):DC(D4) DC(C16):DG(D3) chainA ( 2) ARG3 0 0 15 12 7 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 1 2 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrrgig >1n6j_AB:SRF-like; title=STRUCTURAL BASIS OF SEQUENCE-SPECIFIC RECRUITMENT OF HISTONE DEACETYLASES BY MYOCYTE ENHANCER FACTOR-2 organism=HOMO SAPIENS DNA sequence DA(C3):DT(D16) DG(C4):DC(D15) DC(C5):DG(D14) DT(C6):DA(D13) DA(C7):DT(D12) DT(C8):DA(D11) DT(C9):DA(D10) DT(C10):DA(D9) DA(C11):DT(D8) DT(C12):DA(D7) DA(C13):DT(D6) DA(C14):DT(D5) DG(C15):DC(D4) DC(C16):DG(D3) chainA ( 2) ARG3 0 0 15 12 7 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 1 2 0 0 0 0 0 0 0 0 0 0 chainB ( 2) ARG3 0 0 0 0 0 0 0 0 0 9 14 2 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 4 1 0 0 prot.sequence gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrrgig/gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr >1n6q_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO PRE-TRANSLOCATION AZTMP- TERMINATED DNA (COMPLEX N) organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DA(T705):ATM(P823) DT(T706):DA(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 94) ILE94 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) CYS258 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) VAL261 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) LEU283 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 6 0 0 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpQgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk >1n6q_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO PRE-TRANSLOCATION AZTMP- TERMINATED DNA (COMPLEX N) organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DA(T705):ATM(P823) DT(T706):DA(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 94) ILE94 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) CYS258 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) VAL261 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) LEU283 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 6 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpQgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk/pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpQgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >1nfk_A:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF THE NUCLEAR FACTOR KAPPA-B (NF-KB) P50 HOMODIMER organism=MUS MUSCULUS DNA sequence DG(D2):DC(C11) DG(D3):DC(C10) DG(D4):DC(C9) DA(D5):DT(C8) DA(D6):DT(C7) DT(D7):DA(C6) DT(D8):DA(C5) DC(D9):DG(C4) DC(D10):DG(C3) DC(D11):DG(C2) chainA ( 16) ARG54 12 11 2 0 0 0 0 0 0 0 ( 18) ARG56 13 1 0 0 0 0 0 0 0 0 ( 19) TYR57 0 0 2 12 0 0 0 0 0 0 ( 21) CYS59 0 0 3 0 0 0 0 0 0 0 ( 22) GLU60 0 8 11 0 0 0 0 0 0 0 (203) LYS241 0 0 4 4 0 0 0 0 0 0 (205) PRO243 0 0 0 0 1 0 0 0 0 0 (234) LYS272 0 0 0 1 3 0 0 0 0 0 (267) ARG305 0 0 0 0 0 0 5 4 0 0 prot.sequence gpylqileqpkqrgfRfRYvCEgpshgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKaPnasnlkivrmdrtagcvtggeeiyllcdKvqkddiqirfyeeeenggvwegfgdfsptdvhRqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >1nfk_AB:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF THE NUCLEAR FACTOR KAPPA-B (NF-KB) P50 HOMODIMER organism=MUS MUSCULUS DNA sequence DG(D2):DC(C11) DG(D3):DC(C10) DG(D4):DC(C9) DA(D5):DT(C8) DA(D6):DT(C7) DT(D7):DA(C6) DT(D8):DA(C5) DC(D9):DG(C4) DC(D10):DG(C3) DC(D11):DG(C2) chainA ( 16) ARG54 12 11 2 0 0 0 0 0 0 0 ( 18) ARG56 13 1 0 0 0 0 0 0 0 0 ( 19) TYR57 0 0 2 12 0 0 0 0 0 0 ( 21) CYS59 0 0 3 0 0 0 0 0 0 0 ( 22) GLU60 0 8 11 0 0 0 0 0 0 0 (203) LYS241 0 0 4 4 0 0 0 0 0 0 (205) PRO243 0 0 0 0 1 0 0 0 0 0 (234) LYS272 0 0 0 1 3 0 0 0 0 0 (267) ARG305 0 0 0 0 0 0 5 4 0 0 chainB ( 16) ARG54 0 0 0 0 0 0 0 3 9 13 ( 18) ARG56 0 0 0 0 0 0 0 0 0 13 ( 19) TYR57 0 0 0 0 0 0 9 2 0 0 ( 21) CYS59 0 0 0 0 0 0 0 3 0 0 ( 22) GLU60 0 0 0 0 0 0 0 14 7 3 (203) LYS241 0 0 0 0 0 0 0 8 4 0 (205) PRO243 0 0 0 0 0 1 0 0 0 0 (234) LYS272 0 0 0 0 0 1 0 0 0 0 (267) ARG305 0 0 1 0 0 0 0 0 0 0 prot.sequence gpylqileqpkqrgfRfRYvCEgpshgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKaPnasnlkivrmdrtagcvtggeeiyllcdKvqkddiqirfyeeeenggvwegfgdfsptdvhRqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype/gpylqileqpkqrgfRfRYvCEgpshgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKaPnasnlkivrmdrtagcvtggeeiyllcdKvqkddiqirfyeeeenggvwegfgdfsptdvhRqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >1ng9_A:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=E.COLI MUTS R697A: AN ATPASE-ASYMMETRY MUTANT organism=Escherichia coli DNA sequence DA(E1):DT(F30) DG(E2):DC(F29) DC(E3):DG(F28) DT(E4):DA(F27) DG(E5):DC(F26) DC(E6):DG(F25) DC(E7):DG(F24) DA(E8):DT(F23) DG(E9):DT(F22) DG(E10):DC(F21) DC(E11):DG(F20) DA(E12):DT(F19) DC(E13):DG(F18) DC(E14):DG(F17) DA(E15):DT(F16) DG(E16):DC(F15) DT(E17):DA(F14) chainA ( 33) MET33 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 36) PHE36 0 0 0 0 0 0 0 21 45 0 0 0 0 0 0 0 0 ( 38) GLU38 0 0 0 0 0 0 0 0 13 5 0 0 0 0 0 0 0 ( 58) ARG58 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 ( 68) MET68 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 72) PRO72 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 prot.sequence msaienfdahtpmmqqylrlkaqhpeillfyrMgdFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgagrstfmvemtetanilhnateyslvlmdeigagtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >1ng9_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=E.COLI MUTS R697A: AN ATPASE-ASYMMETRY MUTANT organism=Escherichia coli DNA sequence DA(E1):DT(F30) DG(E2):DC(F29) DC(E3):DG(F28) DT(E4):DA(F27) DG(E5):DC(F26) DC(E6):DG(F25) DC(E7):DG(F24) DA(E8):DT(F23) DG(E9):DT(F22) DG(E10):DC(F21) DC(E11):DG(F20) DA(E12):DT(F19) DC(E13):DG(F18) DC(E14):DG(F17) DA(E15):DT(F16) DG(E16):DC(F15) DT(E17):DA(F14) chainA ( 33) MET33 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 36) PHE36 0 0 0 0 0 0 0 21 45 0 0 0 0 0 0 0 0 ( 38) GLU38 0 0 0 0 0 0 0 0 13 5 0 0 0 0 0 0 0 ( 58) ARG58 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 ( 68) MET68 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 72) PRO72 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 chainB prot.sequence msaienfdahtpmmqqylrlkaqhpeillfyrMgdFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgagrstfmvemtetanilhnateyslvlmdeigagtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/ahtpmmqqylrlkaqhpeillfyrmgdfyelfYddAkRasqlldisltpipmagipyHavenylaklVnqgEsvaiceqverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgastfmvemtetanilhnateyslvlmdeigagtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >1ngm_I:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF A YEAST BRF1-TBP-DNA TERNARY COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(L1):DT(K19) DA(L2):DT(K18) DA(L3):DT(K17) DA(L4):DT(K16) DA(L5):DT(K15) DA(L6):DT(K14) DC(L7):DG(K13) DA(L8):DT(K12) DT(L9):DA(K11) DT(L10):DA(K10) DT(L11):DA(K9) DT(L12):DA(K8) DT(L13):DA(K7) DT(L14):DA(K6) DT(L15):DA(K5) DA(L16):DT(K4) DT(L17):DA(K3) DA(L18):DT(K2) DG(L19):DC(K1) chainI ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 9 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 prot.sequence sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm >1nh2_AC:Transcription_factor_IIA_TFIIA,_beta-barrel_domain;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF A YEAST TFIIA/TBP/DNA COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(F1):DC(E16) DT(F2):DA(E15) DT(F3):DA(E14) DT(F4):DA(E13) DT(F5):DA(E12) DA(F6):5IU(E11) DT(F7):DA(E10) DA(F8):DT(E9) DT(F9):DA(E8) DA(F10):DT(E7) DC(F11):DG(E6) DA(F12):5IU(E5) DT(F13):DA(E4) DA(F14):DT(E3) DC(F15):DG(E2) DA(F16):DT(E1) chainA ( 9) ASN69 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 26 9 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 chainC prot.sequence sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm/dylienlmLcLydkvtrtkarwkcslkdgvvtinrndyTfqkaqveaewv >1nh3_A:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes; title=HUMAN TOPOISOMERASE I ARA-C COMPLEX organism=Homo sapiens DNA sequence DA(D114):DU(B9) DG(D115):DC(B8) DU(D116):DA(B7) DC(D117):DG(B6) DU(D118):DA(B5) DU(D119):DA(B4) DU(D120):DA(B3) DU(D121):DA(B2) DT(D122):DA(B1) chainA (222) ILE424 0 0 0 3 0 0 0 0 0 (224) TYR426 0 2 10 1 0 0 0 0 0 (226) MET428 0 2 0 0 0 0 0 0 0 (289) ASN491 0 0 4 2 0 0 0 0 0 (330) LYS532 5 1 0 0 0 0 0 0 0 prot.sequence wkwweeerypegikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkerianfkieppglfrgrgnhpkmgmlkrrimpediiincskdakvpspppghkwkevrhdnkvtwlvswteniqgsIkYiMlnpssrikgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNekeegetadtvgccslrvehinlhpeldgqeyvvefdflgKdsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynranravsklnldpritvawckkwgvpiekiynktqrekfawaidmadedyef >1njw_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=GUANINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE organism=Geobacillus stearothermophilus DNA sequence DG(B19):DC(C14) DC(B20):DG(C13) DG(B21):DC(C12) DA(B22):DT(C11) DT(B23):DA(C10) DC(B24):DG(C9) DA(B25):DT(C8) DG(B26):DC(C7) DC(B27):DG(C6) DG(B28):DC(C5) DG(B29):DT(C4) chainA (286) LYS582 0 0 0 0 0 0 3 6 0 0 0 (319) ARG615 0 0 0 0 0 0 0 0 0 0 7 (326) ASN622 0 0 0 0 0 0 0 0 1 0 0 (329) ASN625 0 0 0 0 0 0 0 2 7 1 0 (414) PHE710 0 0 0 0 0 0 0 0 0 0 8 (418) TYR714 0 0 0 0 0 0 0 0 0 0 35 (420) ILE716 0 0 0 0 0 0 0 0 0 0 4 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1njx_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=THYMINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE organism=Geobacillus stearothermophilus DNA sequence DG(C4):DT(B29) DA(C5):DT(B28) DG(C6):DC(B27) DC(C7):DG(B26) DA(C8):DT(B25) DT(C9):DA(B24) DC(C10):DG(B23) DA(C11):DT(B22) DT(C12):DA(B21) DG(C13):DC(B20) DC(C14):DG(B19) chainA (286) LYS582 0 0 0 6 2 0 0 0 0 0 0 (326) ASN622 0 0 1 0 0 0 0 0 0 0 0 (329) ASN625 0 1 7 2 0 0 0 0 0 0 0 (414) PHE710 11 0 0 0 0 0 0 0 0 0 0 (418) TYR714 36 0 0 0 0 0 0 0 0 0 0 (420) ILE716 3 0 0 0 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgrlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1njy_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=THYMINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE organism=Geobacillus stearothermophilus DNA sequence DT(C4):DT(B29) DA(C5):DT(B28) DC(C6):DG(B27) DG(C7):DC(B26) DT(C8):DA(B25) DG(C9):DC(B24) DA(C10):DT(B23) DT(C11):DA(B22) DC(C12):DG(B21) DG(C13):DC(B20) DC(C14):DG(B19) chainA (286) LYS582 0 0 0 5 3 0 0 0 0 0 0 (291) TYR587 0 0 1 0 0 0 0 0 0 0 0 (319) ARG615 7 1 0 0 0 0 0 0 0 0 0 (326) ASN622 0 0 1 0 0 0 0 0 0 0 0 (329) ASN625 0 1 9 2 0 0 0 0 0 0 0 (418) TYR714 45 0 0 0 0 0 0 0 0 0 0 (501) GLN797 3 0 0 0 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1njz_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CYTOSINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE organism=Geobacillus stearothermophilus DNA sequence DG(B20):DC(C15) DC(B21):DG(C14) DG(B22):DC(C13) DA(B23):DT(C12) DT(B24):DA(C11) DC(B25):DG(C10) DA(B26):DT(C9) DG(B27):DC(C8) DC(B28):DG(C7) DC(B29):DT(C6) chainA (286) LYS582 0 0 0 0 0 2 5 0 0 0 (319) ARG615 0 0 0 0 0 0 0 0 5 5 (326) ASN622 0 0 0 0 0 0 0 1 0 0 (329) ASN625 0 0 0 0 0 0 1 9 0 0 (418) TYR714 0 0 0 0 0 0 0 0 0 48 (501) GLN797 0 0 0 0 0 0 0 0 0 3 (533) HIS829 0 0 0 0 0 0 0 0 2 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1nk0_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=ADENINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE organism=Geobacillus stearothermophilus DNA sequence DG(C4):DA(B29) DT(C5):DA(B28) DG(C6):DC(B27) DC(C7):DG(B26) DT(C8):DA(B25) DG(C9):DC(B24) DA(C10):DT(B23) DT(C11):DA(B22) DC(C12):DG(B21) DG(C13):DC(B20) DC(C14):DG(B19) chainA (286) LYS582 0 0 0 6 3 0 0 0 0 0 0 (319) ARG615 4 0 0 0 0 0 0 0 0 0 0 (326) ASN622 0 0 1 0 0 0 0 0 0 0 0 (329) ASN625 0 1 7 2 0 0 0 0 0 0 0 (333) ARG629 4 7 0 0 0 0 0 0 0 0 0 (414) PHE710 6 0 0 0 0 0 0 0 0 0 0 (418) TYR714 40 0 0 0 0 0 0 0 0 0 0 (420) ILE716 3 0 0 0 0 0 0 0 0 0 0 (501) GLN797 1 0 0 0 0 0 0 0 0 0 0 (533) HIS829 2 0 0 0 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgIsdyglaqNlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1nk2_P:Homeodomain-like; title=VND/NK-2 HOMEODOMAIN/DNA COMPLEX, NMR, 20 STRUCTURES organism=DROSOPHILA MELANOGASTER DNA sequence DC(B18):DG(A15) DA(B19):DT(A14) DG(B20):DC(A13) DC(B22):DG(A12) DA(B23):DT(A10) DC(B24):DG(A9) DT(B25):DA(A8) DT(B26):DA(A7) DG(B27):DC(A6) DA(B28):DT(A5) DC(B29):DG(A4) DA(B30):DT(A3) DC(B31):DG(A2) chainP ( 11) LYS111 0 0 0 0 0 0 7 5 6 0 0 0 0 ( 13) ARG113 0 0 0 0 0 0 0 0 7 4 5 0 0 ( 55) ILE155 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 58) GLN158 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 59) ASN159 0 0 0 0 0 0 7 10 0 0 0 0 0 ( 62) TYR162 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 66) ARG166 0 0 0 0 0 2 3 0 0 0 0 0 0 prot.sequence asdglpnkkrKrRvlftkaqtyelerrfrqqrylsaperehlaslirltptqvkIwfQNhrYktkRaqnekgyeghp >1nk3_P:Homeodomain-like; title=VND/NK-2 HOMEODOMAIN/DNA COMPLEX, NMR, MINIMIZED AVERAGE STRUCTURE organism=DROSOPHILA MELANOGASTER DNA sequence DG(A2):DC(B31) DT(A3):DA(B30) DG(A4):DC(B29) DT(A5):DA(B28) DC(A6):DG(B27) DA(A7):DT(B26) DA(A8):DT(B25) DG(A9):DC(B24) DT(A10):DA(B23) DG(A11):DC(B22) DG(A12):DC(B21) DC(A13):DG(B20) DT(A14):DA(B19) chainP ( 4) LYS103 0 0 0 0 4 1 0 0 0 0 0 0 0 ( 6) ARG105 0 0 6 3 6 0 0 0 0 0 0 0 0 ( 48) ILE147 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 51) GLN150 0 0 0 0 0 0 0 0 0 5 2 0 0 ( 52) ASN151 0 0 0 0 0 8 5 0 0 0 0 0 0 ( 55) TYR154 0 0 0 0 0 0 0 0 4 0 0 0 0 prot.sequence kkrKrRvlftkaqtyelerrfrqqrylsaperehlaslirltptqvkIwfQNhrYktkraqne >1nk4_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=GUANINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE organism=Geobacillus stearothermophilus DNA sequence DG(C4):DG(B29) DC(C5):DG(B28) DT(C6):DA(B27) DG(C7):DC(B26) DA(C8):DT(B25) DT(C9):DA(B24) DC(C10):DG(B23) DG(C11):DC(B22) DC(C12):DG(B21) chainA (286) LYS582 0 0 0 5 2 0 0 0 0 (319) ARG615 4 0 0 0 0 0 0 0 0 (329) ASN625 0 1 6 2 0 0 0 0 0 (414) PHE710 11 0 0 0 0 0 0 0 0 (418) TYR714 30 0 0 0 0 0 0 0 0 (420) ILE716 2 0 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1nk5_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=ADENINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITE organism=Geobacillus stearothermophilus DNA sequence DC(B17):DG(C16) DA(B18):DT(C15) DT(B19):DA(C14) DG(B20):DC(C13) DG(B21):DC(C12) DC(B22):DG(C11) DA(B23):DT(C10) DT(B24):DA(C9) DT(B25):DA(C8) DG(B26):DC(C7) DA(B27):DT(C6) DT(B28):DA(C5) DA(B29):DT(C4) chainA (286) LYS582 0 0 0 0 0 0 0 0 3 6 0 0 0 (319) ARG615 0 0 0 0 0 0 0 0 0 0 0 3 7 (329) ASN625 0 0 0 0 0 0 0 0 0 2 6 1 0 (333) ARG629 0 0 0 0 0 0 0 0 0 0 0 5 5 (418) TYR714 0 0 0 0 0 0 0 0 0 0 0 0 49 (501) GLN797 0 0 0 0 0 0 0 0 0 0 0 1 3 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1nk6_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CYTOSINE-CYTOSINE MISMATCH AT THE POLYMERASE ACTIVE SITE organism=Geobacillus stearothermophilus DNA sequence DG(B22):DC(C11) DC(B23):DG(C10) DA(B24):DT(C9) DT(B25):DA(C8) DG(B26):DC(C7) DA(B27):DT(C6) DT(B28):DA(C5) DC(B29):DG(C4) chainA (286) LYS582 0 0 0 3 6 0 0 0 (291) TYR587 0 0 0 0 0 1 0 0 (329) ASN625 0 0 0 0 2 6 1 0 (414) PHE710 0 0 0 0 0 0 0 11 (418) TYR714 0 0 0 0 0 0 0 12 (420) ILE716 0 0 0 0 0 0 0 6 (533) HIS829 0 0 0 0 0 0 2 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgrlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1nk8_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE- THYMINE MISMATCH AFTER A SINGLE ROUND OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP. organism=Geobacillus stearothermophilus DNA sequence DG(C4):DC(B29) DT(C5):DG(B28) DG(C6):DC(B27) DC(C7):DG(B26) DT(C8):DA(B25) DG(C9):DC(B24) DA(C10):DT(B23) DT(C11):DA(B22) DC(C12):DG(B21) DG(C13):DC(B20) DC(C14):DG(B19) chainA (286) LYS582 0 0 0 6 3 0 0 0 0 0 0 (319) ARG615 6 0 0 0 0 0 0 0 0 0 0 (326) ASN622 0 0 1 1 0 0 0 0 0 0 0 (329) ASN625 0 0 7 2 0 0 0 0 0 0 0 (414) PHE710 5 0 0 0 0 0 0 0 0 0 0 (418) TYR714 38 0 0 0 0 0 0 0 0 0 0 (420) ILE716 3 0 0 0 0 0 0 0 0 0 0 (533) HIS829 0 1 0 0 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1nk9_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE- THYMINE MISMATCH AFTER TWO ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP AND DGTP. organism=Geobacillus stearothermophilus DNA sequence DG(B18):DC(C15) DC(B19):DG(C14) DG(B20):DC(C13) DA(B21):DT(C12) DT(B22):DA(C11) DC(B23):DG(C10) DA(B24):DT(C9) DG(B25):DC(C8) DC(B26):DG(C7) DG(B27):DT(C6) DC(B28):DG(C5) DG(B29):DC(C4) chainA (286) LYS582 0 0 0 0 0 0 0 5 6 0 0 0 (319) ARG615 0 0 0 0 0 0 0 0 0 0 1 11 (329) ASN625 0 0 0 0 0 0 0 0 3 8 1 0 (333) ARG629 0 0 0 0 0 0 0 0 0 0 7 4 (418) TYR714 0 0 0 0 0 0 0 0 0 0 0 26 (501) GLN797 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1nkb_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE- THYMINE MISMATCH AFTER THREE ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP, DGTP, AND DTTP. organism=Geobacillus stearothermophilus DNA sequence DG(B17):DC(C16) DC(B18):DG(C15) DG(B19):DC(C14) DA(B20):DT(C13) DT(B21):DA(C12) DC(B22):DG(C11) DA(B23):DT(C10) DG(B24):DC(C9) DC(B25):DG(C8) DG(B26):DT(C7) DC(B27):DG(C6) DG(B28):DC(C5) DT(B29):DA(C4) chainA (286) LYS582 0 0 0 0 0 0 0 0 1 6 0 0 0 (291) TYR587 0 0 0 0 0 0 0 0 0 0 1 0 0 (319) ARG615 0 0 0 0 0 0 0 0 0 0 0 3 8 (326) ASN622 0 0 0 0 0 0 0 0 0 3 1 0 0 (329) ASN625 0 0 0 0 0 0 0 0 0 2 7 1 0 (414) PHE710 0 0 0 0 0 0 0 0 0 0 0 0 1 (418) TYR714 0 0 0 0 0 0 0 0 0 0 0 0 41 (501) GLN797 0 0 0 0 0 0 0 0 0 0 0 0 2 (533) HIS829 0 0 0 0 0 0 0 0 0 0 0 1 1 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1nkc_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE- THYMINE MISMATCH AFTER FIVE ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP, DGTP, DTTP, AND DATP. organism=Geobacillus stearothermophilus DNA sequence DG(B2):DC(C41) DC(B3):DG(C40) DG(B4):DC(C39) DA(B5):DT(C38) DT(B6):DA(C37) DC(B7):DG(C36) DA(B8):DT(C35) DG(B9):DC(C34) DC(B10):DG(C33) DG(B11):DT(C32) DC(B12):DG(C31) DG(B13):DC(C30) DT(B14):DA(C29) DA(B15):DT(C28) DC(B16):DG(C27) chainA (286) LYS582 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 (291) TYR587 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (319) ARG615 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 (329) ASN625 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 (418) TYR714 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53 (501) GLN797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1nke_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A CYTOSINE- THYMINE MISMATCH AFTER A SINGLE ROUND OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP. organism=Geobacillus stearothermophilus DNA sequence DG(C6):DC(B29) DT(C7):DC(B28) DG(C8):DC(B27) DC(C9):DG(B26) DT(C10):DA(B25) DG(C11):DC(B24) DA(C12):DT(B23) DT(C13):DA(B22) DC(C14):DG(B21) DG(C15):DC(B20) DC(C16):DG(B19) chainA (286) LYS582 0 0 0 6 3 0 0 0 0 0 0 (291) TYR587 0 0 1 0 0 0 0 0 0 0 0 (319) ARG615 9 1 0 0 0 0 0 0 0 0 0 (326) ASN622 0 0 1 0 0 0 0 0 0 0 0 (329) ASN625 0 1 7 2 0 0 0 0 0 0 0 (418) TYR714 50 0 0 0 0 0 0 0 0 0 0 (501) GLN797 4 0 0 0 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1nkp_A:HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MYC-MAX RECOGNIZING DNA organism=HOMO SAPIENS DNA sequence DG(F102):DC(G319) DA(F103):DT(G318) DG(F104):DC(G317) DT(F105):DA(G316) DA(F106):DT(G315) DG(F107):DC(G314) DC(F108):DG(G313) DA(F109):DT(G312) DC(F110):DG(G311) DG(F111):DC(G310) DT(F112):DA(G309) DG(F113):DC(G308) DC(F114):DG(G307) DT(F115):DA(G306) DA(F116):DT(G305) DC(F117):DG(G304) DT(F118):DA(G303) DC(F119):DG(G302) chainA ( 6) LYS902 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) HIS906 0 0 0 0 0 5 11 16 0 0 0 0 0 0 0 0 0 0 ( 11) ASN907 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 14) GLU910 0 0 0 0 0 2 9 10 0 0 0 0 0 0 0 0 0 0 ( 17) ARG913 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG914 0 0 0 0 0 0 0 2 10 13 0 0 0 0 0 0 0 0 prot.sequence ghmnvKrrtHNvlErqRRnelkrsffalrdqipelennekapkvvilkkatayilsvqaeeqkliseedllrkrreqlkhkleqlggc >1nkp_AB: title=CRYSTAL STRUCTURE OF MYC-MAX RECOGNIZING DNA organism=HOMO SAPIENS DNA sequence DG(F102):DC(G319) DA(F103):DT(G318) DG(F104):DC(G317) DT(F105):DA(G316) DA(F106):DT(G315) DG(F107):DC(G314) DC(F108):DG(G313) DA(F109):DT(G312) DC(F110):DG(G311) DG(F111):DC(G310) DT(F112):DA(G309) DG(F113):DC(G308) DC(F114):DG(G307) DT(F115):DA(G306) DA(F116):DT(G305) DC(F117):DG(G304) DT(F118):DA(G303) DC(F119):DG(G302) chainA ( 6) LYS902 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) HIS906 0 0 0 0 0 5 11 16 0 0 0 0 0 0 0 0 0 0 ( 11) ASN907 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 14) GLU910 0 0 0 0 0 2 9 10 0 0 0 0 0 0 0 0 0 0 ( 17) ARG913 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG914 0 0 0 0 0 0 0 2 10 13 0 0 0 0 0 0 0 0 chainB ( 6) HIS207 0 0 0 0 0 0 0 0 0 0 9 10 4 0 0 0 0 0 ( 7) ASN208 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 10) GLU211 0 0 0 0 0 0 0 0 0 0 10 9 1 0 0 0 0 0 ( 13) ARG214 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 ( 14) ARG215 0 0 0 0 0 0 0 0 13 2 0 0 0 0 0 0 0 0 prot.sequence ghmnvKrrtHNvlErqRRnelkrsffalrdqipelennekapkvvilkkatayilsvqaeeqkliseedllrkrreqlkhkleqlggc/dkrahHNalErkRRdhikdsfhslrdsvpslqgekasraqildkateyiqymrrknhthqqdiddlkrqnalleqqvralggc >1nkp_DE: title=CRYSTAL STRUCTURE OF MYC-MAX RECOGNIZING DNA organism=HOMO SAPIENS DNA sequence DG(J802):DC(H619) DA(J803):DT(H618) DG(J804):DC(H617) DT(J805):DA(H616) DA(J806):DT(H615) DG(J807):DC(H614) DC(J808):DG(H613) DA(J809):DT(H612) DC(J810):DG(H611) DG(J811):DC(H610) DT(J812):DA(H609) DG(J813):DC(H608) DC(J814):DG(H607) DT(J815):DA(H606) DA(J816):DT(H605) DC(J817):DG(H604) DT(J818):DA(H603) DC(J819):DG(H602) chainD ( 8) HIS506 0 0 0 0 0 3 12 14 0 0 0 0 0 0 0 0 0 0 ( 9) ASN507 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 12) GLU510 0 0 0 0 0 1 8 11 1 0 0 0 0 0 0 0 0 0 ( 15) ARG513 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG514 0 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 chainE ( 4) HIS707 0 0 0 0 0 0 0 0 0 0 9 11 4 0 0 0 0 0 ( 5) ASN708 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 8) GLU711 0 0 0 0 0 0 0 0 0 0 10 10 1 0 0 0 0 0 ( 11) ARG714 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 ( 12) ARG715 0 0 0 0 0 0 0 0 13 9 2 0 0 0 0 0 0 0 prot.sequence mnvkrrtHNvlErqRRnelkrsffalrdqipelennekapkvvilkkatayilsvqaeeqkliseedllrkrreqlkhkleql/rahHNalErkRRdhikdsfhslrdsvpslqgekasraqildkateyiqymrrknhthqqdiddlkrqnalleqqvralggc >1nlw_A:HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MAD-MAX RECOGNIZING DNA organism=HOMO SAPIENS DNA sequence DG(F102):DC(G319) DA(F103):DT(G318) DG(F104):DC(G317) DT(F105):DA(G316) DA(F106):DT(G315) DG(F107):DC(G314) DC(F108):DG(G313) DA(F109):DT(G312) DC(F110):DG(G311) DG(F111):DC(G310) DT(F112):DA(G309) DG(F113):DC(G308) DC(F114):DG(G307) DT(F115):DA(G306) DA(F116):DT(G305) DC(F117):DG(G304) DT(F118):DA(G303) DC(F119):DG(G302) chainA ( 5) HIS6 0 0 0 0 0 0 0 0 0 0 7 8 5 0 0 0 0 0 ( 6) ASN7 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 9) GLU10 0 0 0 0 0 0 0 0 0 0 11 10 1 0 0 0 0 0 ( 12) ARG13 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 ( 13) ARG14 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 prot.sequence srstHNemEknRRahlrlsleklkglvplgpdssrhttlslltkaklhikkledsdrkavhqidqlqreqrhlkrqlek >1nlw_AB: title=CRYSTAL STRUCTURE OF MAD-MAX RECOGNIZING DNA organism=HOMO SAPIENS DNA sequence DG(F102):DC(G319) DA(F103):DT(G318) DG(F104):DC(G317) DT(F105):DA(G316) DA(F106):DT(G315) DG(F107):DC(G314) DC(F108):DG(G313) DA(F109):DT(G312) DC(F110):DG(G311) DG(F111):DC(G310) DT(F112):DA(G309) DG(F113):DC(G308) DC(F114):DG(G307) DT(F115):DA(G306) DA(F116):DT(G305) DC(F117):DG(G304) DT(F118):DA(G303) DC(F119):DG(G302) chainA ( 5) HIS6 0 0 0 0 0 0 0 0 0 0 7 8 5 0 0 0 0 0 ( 6) ASN7 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 9) GLU10 0 0 0 0 0 0 0 0 0 0 11 10 1 0 0 0 0 0 ( 12) ARG13 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 ( 13) ARG14 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 chainB ( 1) LYS203 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) HIS207 0 0 0 0 0 4 11 7 0 0 0 0 0 0 0 0 0 0 ( 6) ASN208 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 9) GLU211 0 0 0 0 0 1 10 8 0 0 0 0 0 0 0 0 0 0 ( 12) ARG214 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 ( 13) ARG215 0 0 0 0 0 0 0 2 9 14 0 0 0 0 0 0 0 0 prot.sequence srstHNemEknRRahlrlsleklkglvplgpdssrhttlslltkaklhikkledsdrkavhqidqlqreqrhlkrqlek/KrahHNalErkRRdhikdsfhslrdsvpslqgekasraqildkateyiqymrrknhthqqdiddlkrqnalleqqv >1nlw_DE: title=CRYSTAL STRUCTURE OF MAD-MAX RECOGNIZING DNA organism=HOMO SAPIENS DNA sequence DG(H602):DC(J819) DA(H603):DT(J818) DG(H604):DC(J817) DT(H605):DA(J816) DA(H606):DT(J815) DG(H607):DC(J814) DC(H608):DG(J813) DA(H609):DT(J812) DC(H610):DG(J811) DG(H611):DC(J810) DT(H612):DA(J809) DG(H613):DC(J808) DC(H614):DG(J807) DT(H615):DA(J806) DA(H616):DT(J805) DC(H617):DG(J804) DT(H618):DA(J803) DC(H619):DG(J802) chainD ( 5) HIS506 0 0 0 0 0 0 0 0 0 0 8 16 6 0 0 0 0 0 ( 6) ASN507 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 8) MET509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 9) GLU510 0 0 0 0 0 0 0 0 0 0 11 9 1 0 0 0 0 0 ( 12) ARG513 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 ( 13) ARG514 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 chainE ( 3) HIS707 0 0 0 0 0 6 9 4 0 0 0 0 0 0 0 0 0 0 ( 4) ASN708 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 7) GLU711 0 0 0 0 0 1 10 10 1 0 0 0 0 0 0 0 0 0 ( 10) ARG714 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG715 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 prot.sequence srstHNeMEknRRahlrlsleklkglvplgpdssrhttlslltkaklhikkledsdrkavhqidqlqreqrhlkrql/ahHNalErkRRdhikdsfhslrdsvpslqgekasraqildkateyiqymrrknhthqqdiddlkrqnalleqqv >1nne_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF THE MUTS-ADPBEF3-DNA COMPLEX organism=THERMUS AQUATICUS DNA sequence DC(C1902):DG(D1972) DG(C1903):DC(D1971) DA(C1904):DT(D1970) DC(C1905):DG(D1969) DG(C1906):DC(D1968) DC(C1907):DG(D1967) DT(C1908):DA(D1966) DA(C1909):DT(D1965) DG(C1910):DC(D1964) DC(C1911):DG(D1963) DG(C1912):DC(D1962) DG(C1914):DC(D1961) DC(C1915):DG(D1960) DG(C1916):DC(D1959) DG(C1917):DC(D1958) DC(C1918):DG(D1957) DT(C1919):DA(D1956) DC(C1920):DG(D1955) DG(C1921):DC(D1954) DT(C1922):DA(D1953) DC(C1923):DG(D1952) chainA ( 39) PHE39 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 chainB (466) ASP1472 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence megmlkgegpgplppllqqyvelrdqypdylllfqvgdFyecfgedaerlaralglvlthktskdfttpmagiplrafeayaerllkmgfrlavadqvepaeeaeglvrrevtqlltpgtllqesllpreanylaaiatgdgwglafldvstgefkgtvlksksalydelfrhrpaevllapellengafldefrkrfpvmlseapfepegegplalrrargallayaqrtqggalslqpfrfydpgafmrlpeatlralevfeplrgqdtlfsvldetrtapgrrllqswlrhplldrgplearldrvegfvregalregvrrllyrladlerlatrlelgraspkdlgalrrslqilpelrallgeevglpdlsplkeeleaalvedpplkvseggliregydpdldalraahregvayfleleererertgiptlkvgynavfgyylevtrpyyervpkeyrpvqtlkdrqrytlpemkekerevyrlealirrreeevflevrerakrqaealreaarilaeldvyaalaevavrygyvrprfgdrlqiragrhpvverrtefvpndlemahelvlitgpnmagkstflrqtaliallaqvgsfvpaeeahlplfdgiytrigagkstfmvemeevalilkeatenslvlldevgrgtssldgvaiatavaealherraytlfathyfeltalglprlknlhvaareeagglvfyhqvlpgpasksygvevaamaglpkevvararallqamaar/megmlkgegpgplppllqqyvelrdqypdylllfqvgdfyecfgedaerlaralglvlthktskdfttpmagiplrafeayaerllkmgfrlavadqveplvrrevtqlltpgtllqesllpreanylaaiatgdgwglafldvstgefkgtvlksksalydelfrhrpaevllapellengafldefrkrfpvmlseapfepegegplalrrargallayaqrtqggalslqpfrfydpgafmrlpeatlralevfeplrgqdtlfsvldetrtapgrrllqswlrhplldrgplearldrvegfvregalregvrrllyrladlerlatrlelgraspkdlgalrrslqilpelrallgeevglpdlsplkeeleaalvedpplkvseggliregydpdldalraahregvayfleleererertgiptlkvgynavfgyylevtrpyyervpkeyrpvqtlkDrqrytlpemkekerevyrlealirrreeevflevrerakrqaealreaarilaeldvyaalaevavrygyvrprfgdrlqiragrhpvverrtefvpndlemahelvlitgpnmagkstflrqtaliallaqvgsfvpaeeahlplfdgiytrigasddlaggkstfmvemeevalilkeatenslvlldevgrgtssldgvaiatavaealherraytlfathyfeltalglprlknlhvaareeagglvfyhqvlpgpasksygvevaamaglpkevvararallqamaar >1nne_B:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF THE MUTS-ADPBEF3-DNA COMPLEX organism=? DNA sequence DC(C1902):DG(D1972) DG(C1903):DC(D1971) DA(C1904):DT(D1970) DC(C1905):DG(D1969) DG(C1906):DC(D1968) DC(C1907):DG(D1967) DT(C1908):DA(D1966) DA(C1909):DT(D1965) DG(C1910):DC(D1964) DC(C1911):DG(D1963) DG(C1912):DC(D1962) DG(C1914):DC(D1961) DC(C1915):DG(D1960) DG(C1916):DC(D1959) DG(C1917):DC(D1958) DC(C1918):DG(D1957) DT(C1919):DA(D1956) DC(C1920):DG(D1955) DG(C1921):DC(D1954) DT(C1922):DA(D1953) DC(C1923):DG(D1952) chainB (466) ASP1472 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence megmlkgegpgplppllqqyvelrdqypdylllfqvgdfyecfgedaerlaralglvlthktskdfttpmagiplrafeayaerllkmgfrlavadqveplvrrevtqlltpgtllqesllpreanylaaiatgdgwglafldvstgefkgtvlksksalydelfrhrpaevllapellengafldefrkrfpvmlseapfepegegplalrrargallayaqrtqggalslqpfrfydpgafmrlpeatlralevfeplrgqdtlfsvldetrtapgrrllqswlrhplldrgplearldrvegfvregalregvrrllyrladlerlatrlelgraspkdlgalrrslqilpelrallgeevglpdlsplkeeleaalvedpplkvseggliregydpdldalraahregvayfleleererertgiptlkvgynavfgyylevtrpyyervpkeyrpvqtlkDrqrytlpemkekerevyrlealirrreeevflevrerakrqaealreaarilaeldvyaalaevavrygyvrprfgdrlqiragrhpvverrtefvpndlemahelvlitgpnmagkstflrqtaliallaqvgsfvpaeeahlplfdgiytrigasddlaggkstfmvemeevalilkeatenslvlldevgrgtssldgvaiatavaealherraytlfathyfeltalglprlknlhvaareeagglvfyhqvlpgpasksygvevaamaglpkevvararallqamaar >1nnj_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE COMPLEX BETWEEN THE LACTOCOCCUS LACTIS FPG AND AN ABASIC SITE CONTAINING DNA organism=Lactococcus lactis DNA sequence DT(D2):DA(E28) DC(D3):DG(E27) DT(D4):DA(E26) DT(D5):DA(E25) DT(D6):DA(E24) PDI(D7):DC(E23) DT(D8):DA(E22) DT(D9):DA(E21) DT(D10):DA(E20) DC(D11):DG(E19) DT(D12):DA(E18) DC(D13):DG(E17) DG(D14):DC(E16) chainA ( 2) GLU2 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 74) ARG74 0 0 0 0 0 0 6 4 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 5 13 0 0 0 0 0 0 (109) ARG109 0 0 0 0 66 15 1 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 11 37 0 0 0 0 0 0 (171) ASN171 0 0 0 0 0 5 0 0 0 0 0 0 0 (172) ILE172 0 0 0 0 0 3 0 0 0 0 0 0 0 (234) TYR238 0 0 0 0 0 3 0 0 0 0 0 0 0 (256) ARG260 0 0 0 0 0 2 5 1 0 0 0 0 0 prot.sequence gelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssialgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >1nvp_AC:TATA-box_binding_protein-like;Transcription_factor_IIA_TFIIA,_beta-barrel_domain; title=HUMAN TFIIA/TBP/DNA COMPLEX organism=HOMO SAPIENS DNA sequence DG(E1):DC(F17) DG(E2):DC(F16) DG(E3):DC(F15) DG(E4):DC(F14) DG(E5):DC(F13) DG(E6):DC(F12) DG(E7):DC(F11) DC(E8):DG(F10) DT(E9):DA(F9) DA(E10):DT(F8) DT(E11):DA(F7) DA(E12):DT(F6) DA(E13):DT(F5) DA(E14):DT(F4) DA(E15):DT(F3) DG(E16):DC(F2) DG(E17):DC(F1) chainA ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 9 26 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 chainC prot.sequence sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrkt/dtenvvvcQyDkihrsknkwkfhlkdgimnlngrdyifSkaigdaew >1nwq_AC:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF C/EBPALPHA-DNA COMPLEX organism=Rattus norvegicus DNA sequence DA(D-11):DT(B11) DA(D-10):DT(B10) DC(D-9):DG(B9) DT(D-8):DA(B8) DG(D-7):DC(B7) DG(D-6):DC(B6) DA(D-5):DT(B5) DT(D-4):DA(B4) DT(D-3):DA(B3) DG(D-2):DC(B2) DC(D-1):DG(B1) DG(D1):DC(B-1) DC(D2):DG(B-2) DA(D3):DT(B-3) DA(D4):DT(B-4) DT(D5):DA(B-5) DA(D6):DT(B-6) DG(D7):DC(B-7) DG(D8):DC(B-8) DA(D9):DT(B-9) chainA ( 9) ARG289 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 ( 12) ASN292 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 1 0 0 0 0 ( 13) ASN293 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 15) ALA295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 16) VAL296 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 ( 20) ARG300 0 0 0 0 0 0 0 0 0 0 4 11 4 0 0 0 0 0 0 0 chainC ( 9) ARG289 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 ( 12) ASN292 0 0 0 0 0 0 2 8 6 0 0 0 0 0 0 0 0 0 0 0 ( 15) ALA295 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) VAL296 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 0 0 0 0 ( 19) SER299 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG300 0 0 0 0 0 0 0 0 6 8 12 3 0 0 0 0 0 0 0 0 prot.sequence nsneyrvrRerNNiAVrksRdkakqrnvetqqkvleltsdndrlrkrveqlsreldtlrg/nsneyrvrRerNniAVrkSRdkakqrnvetqqkvleltsdndrlrkrveqlsreldtlrg >1nwq_C:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF C/EBPALPHA-DNA COMPLEX organism=Rattus norvegicus DNA sequence DT(B-9):DA(D9) DC(B-8):DG(D8) DC(B-7):DG(D7) DT(B-6):DA(D6) DA(B-5):DT(D5) DT(B-4):DA(D4) DT(B-3):DA(D3) DG(B-2):DC(D2) DC(B-1):DG(D1) DG(B1):DC(D-1) DC(B2):DG(D-2) DA(B3):DT(D-3) DA(B4):DT(D-4) DT(B5):DA(D-5) DC(B6):DG(D-6) DC(B7):DG(D-7) DA(B8):DT(D-8) DG(B9):DC(D-9) DT(B10):DA(D-10) DT(B11):DA(D-11) chainC ( 9) ARG289 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 ( 12) ASN292 0 0 0 0 0 0 0 0 0 0 0 6 8 2 0 0 0 0 0 0 ( 15) ALA295 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 16) VAL296 0 0 0 0 0 0 0 0 0 0 1 5 4 0 0 0 0 0 0 0 ( 19) SER299 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 20) ARG300 0 0 0 0 0 0 0 0 3 12 8 6 0 0 0 0 0 0 0 0 prot.sequence nsneyrvrRerNniAVrkSRdkakqrnvetqqkvleltsdndrlrkrveqlsreldtlrg >1nzb_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF WILD TYPE CRE RECOMBINASE-LOXP SYNAPSE organism=Enterobacteria phage P1 DNA sequence DG(D101):DC(C136) DA(D102):DT(C135) DT(D103):DA(C134) DA(D104):DT(C133) DA(D105):DT(C132) DC(D106):DG(C131) DT(D107):DA(C130) DT(D108):DA(C129) DC(D109):DG(C128) DG(D110):DC(C127) DT(D111):DA(C126) DA(D112):DT(C125) DT(D113):DA(C124) DA(D114):DT(C123) DG(D115):DC(C122) DC(D116):DG(C121) DA(D117):DT(C120) DT(D118):DA(C119) DA(D119):DT(C118) DC(D120):DG(C117) DA(D121):DT(C116) DT(D122):DA(C115) DT(D123):DA(C114) DA(D124):DT(C113) DT(D125):DA(C112) DA(D126):DT(C111) DC(D127):DG(C110) DG(D128):DC(C109) DA(D129):DT(C108) DA(D130):UMP(C107) DG(D131):DC(C106) DT(D132):DA(C105) DT(D133):DA(C104) DA(D134):DT(C103) DT(D135):DA(C102) DC(D136):DG(C101) chainA ( 31) HIS40 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) MET44 0 0 0 0 0 0 0 0 0 0 2 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER47 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) THR87 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 5 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ARG241 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) LYS244 1 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) SER257 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) ARG259 0 0 0 0 0 0 1 10 16 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) GLU262 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (273) ARG282 0 0 0 0 0 0 0 0 0 0 5 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 5 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (225) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 7 0 (238) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 16 11 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ASN319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nlpalpvdatsdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvNivmnyirnldsetgamvrlled >1nzb_B:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF WILD TYPE CRE RECOMBINASE-LOXP SYNAPSE organism=Enterobacteria phage P1 DNA sequence DG(C101):DC(D136) DA(C102):DT(D135) DT(C103):DA(D134) DA(C104):DT(D133) DA(C105):DT(D132) DC(C106):DG(D131) UMP(C107):DA(D130) DT(C108):DA(D129) DC(C109):DG(D128) DG(C110):DC(D127) DT(C111):DA(D126) DA(C112):DT(D125) DT(C113):DA(D124) DA(C114):DT(D123) DA(C115):DT(D122) DT(C116):DA(D121) DG(C117):DC(D120) DT(C118):DA(D119) DA(C119):DT(D118) DT(C120):DA(D117) DG(C121):DC(D116) DC(C122):DG(D115) DT(C123):DA(D114) DA(C124):DT(D113) DT(C125):DA(D112) DA(C126):DT(D111) DC(C127):DG(D110) DG(C128):DC(D109) DA(C129):DT(D108) DA(C130):DT(D107) DG(C131):DC(D106) DT(C132):DA(D105) DT(C133):DA(D104) DA(C134):DT(D103) DT(C135):DA(D102) DC(C136):DG(D101) chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 5 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 7 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 0 7 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 11 16 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ASN319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvNivmnyirnldsetgamvrlled >1o3q_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES organism=Escherichia coli DNA sequence DA(B-2):DT(C-2) DA(B-1):DT(C-1) DA(B1):DT(C1) DA(B2):DT(C2) DA(B3):DT(C3) DT(B4):DA(C4) DG(B5):DC(C5) DT(B6):DA(C6) DG(B7):DC(C7) DA(B8):DT(C8) DT(B9):DA(C9) chainA (172) SER179 0 0 0 0 0 0 0 0 0 2 0 (173) ARG180 0 0 0 0 0 9 13 6 0 0 0 (174) GLU181 0 0 0 0 0 0 0 3 6 8 0 (175) THR182 0 0 0 0 0 0 0 0 0 0 1 (178) ARG185 0 0 0 0 0 0 0 0 4 7 1 prot.sequence dptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcSRETvgRilkmledqnlisahgktivvyg >1o3r_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES organism=Escherichia coli DNA sequence DA(B-2):DT(C-2) DA(B-1):DT(C-1) DA(B1):DT(C1) DA(B2):DT(C2) DA(B3):DT(C3) DT(B4):DA(C4) DG(B5):DC(C5) DC(B6):DG(C6) DG(B7):DC(C7) DA(B8):DT(C8) DT(B9):DA(C9) chainA (172) SER179 0 0 0 0 0 0 0 0 0 1 1 (173) ARG180 0 0 0 0 0 12 14 2 0 0 0 (174) GLU181 0 0 0 0 0 0 0 4 9 5 0 (178) ARG185 0 0 0 0 0 0 0 1 7 8 2 (194) LYS201 0 0 1 0 0 0 0 0 0 0 0 prot.sequence dptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcSREtvgRilkmledqnlisahgKtivvyg >1o3s_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES organism=Escherichia coli DNA sequence DA(B-2):DT(C-2) DA(B-1):DT(C-1) DA(B1):DT(C1) DA(B2):DT(C2) DA(B3):DT(C3) DT(B4):DA(C4) DG(B5):DC(C5) DC(B6):DG(C6) DG(B7):DC(C7) DA(B8):DT(C8) DT(B9):DA(C9) chainA (172) SER179 0 0 0 0 0 0 0 0 0 1 0 (173) ARG180 0 0 0 0 0 3 7 1 0 0 0 (174) ASP181 0 0 0 0 0 0 1 5 3 5 0 (178) ARG185 0 0 0 0 0 0 0 3 8 7 0 prot.sequence dptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcSRDtvgRilkmledqnlisahgktivvyg >1o3t_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES organism=Escherichia coli DNA sequence DA(D9):DT(C9) DT(D8):DA(C8) DC(D7):DG(C7) DG(D6):DC(C6) DC(D5):DG(C5) DA(D4):DT(C4) DT(D3):DA(C3) DT(D2):DA(C2) DT(D1):DA(C1) DT(D-1):DA(C-1) DT(D-2):DA(C-2) DC(D-3):DG(C-3) DG(D-4):DC(C-4) chainA (162) GLN170 0 0 0 0 0 1 0 0 0 0 0 0 0 (172) ARG180 0 0 1 0 0 0 0 0 0 0 0 0 0 (173) GLU181 0 5 7 0 0 0 0 0 0 0 0 0 0 (177) ARG185 1 8 4 0 0 0 0 0 0 0 0 0 0 prot.sequence ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcsREtvgRilkmledqnlisahgktivvyg >1o4x_A:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=TERNARY COMPLEX OF THE DNA BINDING DOMAINS OF THE OCT1 AND SOX2 TRANSCRIPTION FACTORS WITH A 19MER OLIGONUCLEOTIDE FROM THE HOXB1 REGULATORY ELEMENT organism=HOMO SAPIENS DNA sequence DC(D320):DG(C319) DA(D321):DT(C318) DT(D322):DA(C317) DT(D323):DA(C316) DA(D324):DT(C315) DG(D325):DC(C314) DC(D326):DG(C313) DA(D327):DT(C312) DT(D328):DA(C311) DG(D329):DC(C310) DA(D330):DT(C309) DC(D331):DG(C308) DA(D332):DT(C307) DA(D333):DT(C306) DA(D334):DT(C305) DG(D335):DC(C304) DA(D336):DT(C303) DC(D337):DG(C302) DA(D338):DT(C301) chainA ( 43) SER47 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN48 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 ( 45) THR49 0 0 0 0 0 1 6 8 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG53 0 0 0 0 0 5 5 5 0 0 0 0 0 0 0 0 0 0 0 (116) VAL150 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) ASN154 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) GLN157 9 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) ARG161 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eepsdleeleqfaktfkqrriklgftqgdvglamgklygndfSQTtisRfealnlsfknmaklkpllekwlndaesietnirvaleksflenqkptseeitmiadqlnmekevirVwfcNrrQkekRin >1o4x_AB:lambda_repressor-like_DNA-binding_domains;Homeodomain-like;HMG-box; title=TERNARY COMPLEX OF THE DNA BINDING DOMAINS OF THE OCT1 AND SOX2 TRANSCRIPTION FACTORS WITH A 19MER OLIGONUCLEOTIDE FROM THE HOXB1 REGULATORY ELEMENT organism=HOMO SAPIENS DNA sequence DC(D320):DG(C319) DA(D321):DT(C318) DT(D322):DA(C317) DT(D323):DA(C316) DA(D324):DT(C315) DG(D325):DC(C314) DC(D326):DG(C313) DA(D327):DT(C312) DT(D328):DA(C311) DG(D329):DC(C310) DA(D330):DT(C309) DC(D331):DG(C308) DA(D332):DT(C307) DA(D333):DT(C306) DA(D334):DT(C305) DG(D335):DC(C304) DA(D336):DT(C303) DC(D337):DG(C302) DA(D338):DT(C301) chainA ( 43) SER47 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN48 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 ( 45) THR49 0 0 0 0 0 1 6 8 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG53 0 0 0 0 0 5 5 5 0 0 0 0 0 0 0 0 0 0 0 (116) VAL150 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) ASN154 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) GLN157 9 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) ARG161 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 5) ARG210 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 ( 8) ASN213 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 ( 10) PHE215 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 ( 11) MET216 0 0 0 0 0 0 0 0 0 0 0 0 11 13 0 0 0 0 0 ( 18) ARG223 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 ( 30) ASN235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 16 0 0 0 ( 31) SER236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 34) SER239 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 ( 72) TYR277 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 prot.sequence eepsdleeleqfaktfkqrriklgftqgdvglamgklygndfSQTtisRfealnlsfknmaklkpllekwlndaesietnirvaleksflenqkptseeitmiadqlnmekevirVwfcNrrQkekRin/drvkRpmNaFMvwsrgqRrkmaqenpkmhNSeiSkrlgaewkllsetekrpfideakrlralhmkehpdykYrprrk >1o4x_B:HMG-box; title=TERNARY COMPLEX OF THE DNA BINDING DOMAINS OF THE OCT1 AND SOX2 TRANSCRIPTION FACTORS WITH A 19MER OLIGONUCLEOTIDE FROM THE HOXB1 REGULATORY ELEMENT organism=HOMO SAPIENS DNA sequence DT(C301):DA(D338) DG(C302):DC(D337) DT(C303):DA(D336) DC(C304):DG(D335) DT(C305):DA(D334) DT(C306):DA(D333) DT(C307):DA(D332) DG(C308):DC(D331) DT(C309):DA(D330) DC(C310):DG(D329) DA(C311):DT(D328) DT(C312):DA(D327) DG(C313):DC(D326) DC(C314):DG(D325) DT(C315):DA(D324) DA(C316):DT(D323) DA(C317):DT(D322) DT(C318):DA(D321) DG(C319):DC(D320) chainB ( 5) ARG210 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 ( 8) ASN213 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 ( 10) PHE215 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) MET216 0 0 0 0 0 13 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG223 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN235 0 0 0 16 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER236 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER239 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) TYR277 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 prot.sequence drvkRpmNaFMvwsrgqRrkmaqenpkmhNSeiSkrlgaewkllsetekrpfideakrlralhmkehpdykYrprrk >1oct_C:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=CRYSTAL STRUCTURE OF THE OCT-1 POU DOMAIN BOUND TO AN OCTAMER SITE: DNA RECOGNITION WITH TETHERED DNA-BINDING MODULES organism=? DNA sequence DG(A202):DC(B230) DT(A203):DA(B229) DA(A204):DT(B228) DT(A205):DA(B227) DG(A206):DC(B226) DC(A207):DG(B225) DA(A208):DT(B224) DA(A209):DT(B223) DA(A210):DT(B222) DT(A211):DA(B221) DA(A212):DT(B220) DA(A213):DT(B219) DG(A214):DC(B218) DG(A215):DC(B217) chainC ( 39) SER43 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 40) GLN44 0 9 9 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR45 0 0 0 10 6 3 0 0 0 0 0 0 0 0 ( 44) SER48 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 45) ARG49 0 0 0 0 7 8 4 0 0 0 0 0 0 0 ( 51) LEU55 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 72) ARG102 0 0 0 0 0 0 1 3 3 0 0 0 0 0 ( 75) ARG105 0 0 0 0 1 17 10 3 0 0 0 0 0 0 (117) VAL147 0 0 0 0 0 0 0 0 2 3 0 0 0 0 (120) CYS150 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (121) ASN151 0 0 0 0 0 0 0 3 8 0 0 0 0 0 prot.sequence dleeleqfaktfkqrriklgftqgdvglamgklygndfSQTtiSRfealnLsfknmcklkpllekwlndaeRkkRtsietnirvaleksflenqkptseeitmiadqlnmekevirVwfCNrrqkekrinp >1odg_A:Restriction_endonuclease-like; title=VERY-SHORT-PATCH DNA REPAIR ENDONUCLEASE BOUND TO ITS REACTION PRODUCT SITE organism=ESCHERICHIA COLI DNA sequence DT(W1):DG(F8) DA(W2):DT(F7) DG(W3):5CM(F6) DG(W4):DC(F5) DC(W5):DG(F4) 5CM(W6):DG(F3) DT(W7):DA(F2) DG(W8):DT(F1) chainA ( 45) PHE67 0 5 0 0 0 0 0 0 ( 46) TRP68 66 20 0 0 0 0 0 0 ( 47) HIS69 3 0 0 0 0 0 0 0 ( 57) PRO79 0 2 0 0 0 0 0 0 ( 63) PHE85 4 0 0 0 0 0 0 0 ( 64) TRP86 11 4 0 0 0 0 0 0 ( 67) LYS89 13 0 0 0 0 0 0 0 ( 71) ASN93 9 0 0 0 0 0 0 0 prot.sequence aiekrlaslltgqglafrvqdaslpgrpdfvvdeyrcvifthgcFWHhhhcylfkvPatrteFWleKigkNverdrrdisrlqelgwrvlivwecalrgrekltdealterleewicgegasaqidtqgihlla >1odh_A:GCM_domain; title=STRUCTURE OF THE GCM DOMAIN BOUND TO DNA organism=MUS MUSCULUS DNA sequence DT(D1014):DA(C1013) DG(D1015):DC(C1012) DC(D1016):DG(C1011) DA(D1017):DT(C1010) DC(D1018):DG(C1009) DC(D1019):DG(C1008) DC(D1020):DG(C1007) DG(D1021):DC(C1006) DC(D1022):DG(C1005) DA(D1023):DT(C1004) DT(D1024):DA(C1003) DC(D1025):DG(C1002) DG(D1026):DC(C1001) chainA ( 50) ASN63 0 0 0 0 0 0 0 9 7 0 0 0 0 ( 51) THR64 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 52) ASN65 0 0 0 0 6 10 18 0 0 0 0 0 0 ( 54) HIS67 0 0 0 1 12 5 0 0 0 0 0 0 0 ( 87) ILE100 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence lswdindvklpqnvkttdwfqewpdsyvkhiyssddrnaqrhlsswamrNTNnHnsrilkksclgvvvcsrdcsteegrkiylrpaIcdkarqkqqrkscpncngplklipcrghggfpvtnfwrhdgrfiffqskgehdhprpetkleaearramk >1oe4_B:Uracil-DNA_glycosylase-like; title=XENOPUS SMUG1, AN ANTI-MUTATOR URACIL-DNA GLYCOSYLASE organism=XENOPUS LAEVIS DNA sequence DC(E281) DC(E282) DC(E283) DG(E284) DT(E285) DG(E286) DA(E287) DG(E288) DT(E289) DC(E290) DC(E291) DG(E292) chainB (112) VAL147 0 0 0 0 0 0 0 0 0 0 0 5 (116) ARG151 0 0 0 0 0 0 0 0 0 0 0 9 (218) PRO253 0 0 0 0 0 0 0 0 0 0 0 7 (224) ASN259 0 0 0 0 0 0 0 0 0 0 0 17 prot.sequence espadsflkvelelnlklsnlvfqdpvqyvynplvyawaphenyvqtyckskkevlflgmnpgpfgmaqtgvpfgevnhvrdwlqiegpvskpevehpkrrirgfecpqseVsgaRfwslfkslcgqpetffkhcfvhnhcplifmnhsgknltptdlpkaqrdtlleicdealcqavrvlgvklvigvgrfseqrarkalmaegidvtvkgimhpsPrnpqaNkgwegivrgqllelgvlsllt >1oe5_B:Uracil-DNA_glycosylase-like; title=XENOPUS SMUG1, AN ANTI-MUTATOR URACIL-DNA GLYCOSYLASE organism=XENOPUS LAEVIS DNA sequence DC(E281) DC(E282) DC(E283) DG(E284) DT(E285) DG(E286) DA(E287) DG(E288) DT(E289) DC(E290) DC(E291) DG(E292) chainB (112) VAL147 0 0 0 0 0 0 0 0 0 0 0 5 (116) ARG151 0 0 0 0 0 0 0 0 0 0 0 8 (218) PRO253 0 0 0 0 0 0 0 0 0 0 0 7 (224) ASN259 0 0 0 0 0 0 0 0 0 0 0 17 prot.sequence espadsflkvelelnlklsnlvfqdpvqyvynplvyawaphenyvqtyckskkevlflgmnpgpfgmaqtgvpfgevnhvrdwlqiegpvskpevehpkrrirgfecpqseVsgaRfwslfkslcgqpetffkhcfvhnhcplifmnhsgknltptdlpkaqrdtlleicdealcqavrvlgvklvigvgrfseqrarkalmaegidvtvkgimhpsPrnpqaNkgwegivrgqllelgvlsllt >1oe6_B:Uracil-DNA_glycosylase-like; title=XENOPUS SMUG1, AN ANTI-MUTATOR URACIL-DNA GLYCOSYLASE organism=XENOPUS LAEVIS DNA sequence DC(E281) DC(E282) DC(E283) DG(E284) DT(E285) DG(E286) DA(E287) DG(E288) DT(E289) DC(E290) DC(E291) DG(E292) chainB (112) VAL147 0 0 0 0 0 0 0 0 0 0 0 6 (116) ARG151 0 0 0 0 0 0 0 0 0 0 0 8 (218) PRO253 0 0 0 0 0 0 0 0 0 0 0 5 (224) ASN259 0 0 0 0 0 0 0 0 0 0 0 18 prot.sequence espadsflkvelelnlklsnlvfqdpvqyvynplvyawaphenyvqtyckskkevlflgmnpgpfgmaqtgvpfgevnhvrdwlqiegpvskpevehpkrrirgfecpqseVsgaRfwslfkslcgqpetffkhcfvhnhcplifmnhsgknltptdlpkaqrdtlleicdealcqavrvlgvklvigvgrfseqrarkalmaegidvtvkgimhpsPrnpqaNkgwegivrgqllelgvlsllt >1oh5_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH A C:A MISMATCH organism=ESCHERICHIA COLI DNA sequence DA(E1):DT(F30) DG(E2):DC(F29) DC(E3):DG(F28) DT(E4):DA(F27) DG(E5):DC(F26) DC(E6):DG(F25) DC(E7):DG(F24) DA(E8):DT(F23) DC(E9):DA(F22) DG(E10):DC(F21) DC(E11):DG(F20) DA(E12):DT(F19) DC(E13):DG(F18) DC(E14):DG(F17) DA(E15):DT(F16) DG(E16):DC(F15) DT(E17):DA(F14) chainA ( 34) ASP35 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 17 51 0 0 0 0 0 0 0 0 ( 37) GLU38 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 chainB prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrmgDFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/mqqylrlkaqhpeillfyrmgdfyelfyddakrASqLldisltpmagipyhavenyLaklvnqgesVaicErkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgtfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >1oh6_A:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH AN A:A MISMATCH organism=ESCHERICHIA COLI DNA sequence DC(F15):DG(E16) DT(F16):DA(E15) DG(F17):DC(E14) DG(F18):DC(E13) DT(F19):DA(E12) DG(F20):DC(E11) DC(F21):DG(E10) DA(F22):DA(E9) DT(F23):DA(E8) DG(F24):DC(E7) DG(F25):DC(E6) DC(F26):DG(E5) DA(F27):DT(E4) DG(F28):DC(E3) DC(F29):DG(E2) DT(F30):DA(E1) chainA ( 32) MET33 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 51 17 0 0 0 0 0 0 0 ( 37) GLU38 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgDFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >1oh6_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH AN A:A MISMATCH organism=ESCHERICHIA COLI DNA sequence DC(F15):DG(E16) DT(F16):DA(E15) DG(F17):DC(E14) DG(F18):DC(E13) DT(F19):DA(E12) DG(F20):DC(E11) DC(F21):DG(E10) DA(F22):DA(E9) DT(F23):DA(E8) DG(F24):DC(E7) DG(F25):DC(E6) DC(F26):DG(E5) DA(F27):DT(E4) DG(F28):DC(E3) DC(F29):DG(E2) DT(F30):DA(E1) chainA ( 32) MET33 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 51 17 0 0 0 0 0 0 0 ( 37) GLU38 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 chainB prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgDFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/mqqylrlkaqhpeillfyrmgdfyelfyddaKrASqLldisltpmagipyhavenyLaklvnqgesVaicErkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgtfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >1oh7_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH A G:G MISMATCH organism=ESCHERICHIA COLI DNA sequence DA(F14):DT(E17) DC(F15):DG(E16) DT(F16):DA(E15) DG(F17):DC(E14) DG(F18):DC(E13) DT(F19):DA(E12) DG(F20):DC(E11) DC(F21):DG(E10) DG(F22):DG(E9) DT(F23):DA(E8) DG(F24):DC(E7) DG(F25):DC(E6) DC(F26):DG(E5) DA(F27):DT(E4) DG(F28):DC(E3) DC(F29):DG(E2) DT(F30):DA(E1) chainA ( 32) MET33 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 0 57 20 0 0 0 0 0 0 0 ( 37) GLU38 0 0 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 chainB prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgDFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/mqqylrlkaqhpeillfyrmgdfyelfyddaKrASqLldisltpmagipyhavenyLaklvnqgesVaicErkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgtfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >1oh8_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH AN UNPAIRED THYMIDINE organism=ESCHERICHIA COLI DNA sequence DG(F17):DC(E13) DT(F18):DA(E12) DG(F19):DC(E11) DC(F21):DG(E10) DT(F22):DG(E9) DT(F23):DA(E8) DG(F24):DC(E7) DG(F25):DC(E6) DC(F26):DG(E5) DA(F27):DT(E4) DG(F28):DC(E3) DC(F29):DG(E2) DT(F30):DA(E1) chainA ( 32) MET33 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 50 20 0 0 0 0 0 0 0 ( 37) GLU38 0 0 0 2 11 0 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 11 0 0 0 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 3 0 0 0 0 0 0 0 chainB prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgDFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/mqqylrlkaqhpeillfyrmgdfyelfyddaKrASqLldisltpmagipyhavenyLaklvnqgesVaicErkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgtfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >1omh_A:Origin_of_replication-binding_domain,_RBD-like; title=CONJUGATIVE RELAXASE TRWC IN COMPLEX WITH ORIT DNA. METAL-FREE STRUCTURE. organism=Escherichia coli DNA sequence DG(B3):DC(B16) DC(B4):DG(B15) DA(B5):DT(B14) DC(B6):DG(B13) DC(B7):DG(B12) DG(B8):DA(B10) chainA ( 62) ALA73 0 0 0 5 2 0 ( 64) ARG75 0 4 10 7 0 0 ( 70) ARG81 3 0 0 0 0 0 (117) ARG128 8 12 10 0 0 0 (119) LYS130 0 0 0 10 0 0 (167) ARG178 0 0 0 0 0 2 (170) LYS181 1 0 0 0 0 0 prot.sequence mlshmvltrqdigraasyygdasewqgkgaeelglsgevdskrfrellagnigeghrimrsAtRqdskeRigldltfsapksvslqalvagdaeiikahdravartleqaearaqaRqKiqgktriettgnlvigkfrhetsrerdpqlhthavilnmtkrsdgqwRalKndeivkatrylgavynaelahelqklgyqlrygkdgnfdlahidrqqiegfskrteqiaewyaargldpnsvsleqkqaakvlsrakktsvdrealraewqatakelgidfs >1orn_A:DNA-glycosylase; title=STRUCTURE OF A TRAPPED ENDONUCLEASE III-DNA COVALENT INTERMEDIATE: ESTRANGED-GUANINE COMPLEX organism=Geobacillus stearothermophilus DNA sequence DG(C13):DC(B11) DT(C14):DA(B10) DC(C15):DG(B9) DC(C16):DG(B8) DA(C17):DT(B7) PED(C18):DG(B6) DG(C19):DC(B5) DT(C20):DA(B4) DC(C21):DG(B3) DT(C22):DA(B2) chainA ( 42) GLN42 0 0 0 0 2 5 25 0 0 0 ( 43) CYS43 0 0 0 0 0 1 0 0 0 0 ( 44) THR44 0 0 0 0 2 0 0 0 0 0 ( 82) LEU82 0 0 0 0 0 18 8 0 0 0 prot.sequence mltkqqirycldemakmfpdahcelvhrnpfelliavvlsaQCTdalvnkvtkrlfekyrtphdyiavpleeleqdirsigLyrnkarniqklcamlidkyngevprdrdelmklpgvgrktanvvvsvafgvpaiavdthvervskrlgfcrwddsvlevektlmkiipkeewsithhrmiffgryhckaqspqcpscpllhlcregkkrmrk >1orp_A:DNA-glycosylase; title=STRUCTURE OF A TRAPPED ENDONUCLEASE III-DNA COVALENT INTERMEDIATE: ESTRANGED-ADENINE COMPLEX organism=Geobacillus stearothermophilus DNA sequence DG(C13):DC(B11) DT(C14):DA(B10) DC(C15):DG(B9) DC(C16):DG(B8) DA(C17):DT(B7) PED(C18):DA(B6) DG(C19):DC(B5) DT(C20):DA(B4) DC(C21):DG(B3) DT(C22):DA(B2) chainA ( 42) GLN42 0 0 0 0 4 2 24 0 0 0 ( 44) THR44 0 0 0 0 2 0 0 0 0 0 ( 82) LEU82 0 0 0 0 0 15 10 0 0 0 ( 85) ASN85 0 0 0 0 0 0 1 0 0 0 prot.sequence mltkqqirycldemakmfpdahcelvhrnpfelliavvlsaQcTdalvnkvtkrlfekyrtphdyiavpleeleqdirsigLyrNkarniqklcamlidkyngevprdrdelmklpgvgrktanvvvsvafgvpaiavdthvervskrlgfcrwddsvlevektlmkiipkeewsithhrmiffgryhckaqspqcpscpllhlcregkkrmr >1osb_C:Origin_of_replication-binding_domain,_RBD-like; title=CONJUGATIVE RELAXASE TRWC IN COMPLEX WITH ORIT DNA. METAL-FREE STRUCTURE. organism=Escherichia coli DNA sequence DG(D3):DC(D16) DC(D4):DG(D15) DA(D5):DT(D14) DC(D6):DG(D13) DC(D7):DG(D12) DG(D8):DA(D10) chainC ( 63) ALA73 0 0 0 4 2 0 ( 65) ARG75 0 4 7 2 0 0 ( 71) ARG81 1 0 0 0 0 0 (118) ARG128 9 13 8 0 0 0 (120) LYS130 0 0 2 8 0 0 prot.sequence mlshmvltrqdigraasyyegdasewqgkgaeelglsgevdskrfrellagnigeghrimrsAtRqdskeRigldltfsapksvslqalvagdaeiikahdravartleqaearaqaRqKiqgktriettgnlvigkfrhetsrerdpqlhthavilnmtkrsdgqwralkndeivkatrylgavynaelahelqklgyqlrygkdgnfdlahidrqqiegfskrteqiaewyaargldpnsvsleqkqaakvlsrakktsvdrealraewqatakelgidf >1osl_AB:lambda_repressor-like_DNA-binding_domains; title=SOLUTION STRUCTURE OF A DIMERIC LACTOSE DNA-BINDING DOMAIN COMPLEXED TO A NONSPECIFIC DNA SEQUENCE organism=ESCHERICHIA COLI DNA sequence DC(D1):DG(C18) DG(D2):DC(C17) DA(D3):DT(C16) DT(D4):DA(C15) DA(D5):DT(C14) DA(D6):DT(C13) DG(D7):DC(C12) DA(D8):DT(C11) DT(D9):DA(C10) DA(D10):DT(C9) DT(D11):DA(C8) DC(D12):DG(C7) DT(D13):DA(C6) DT(D14):DA(C5) DA(D15):DT(C4) DT(D16):DA(C3) DC(D17):DG(C2) DG(D18):DC(C1) chainA ( 7) TYR7 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 0 0 0 0 0 0 2 8 9 0 0 0 0 ( 19) THR19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 0 0 ( 29) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 51) ARG51 0 0 0 0 0 0 0 3 4 3 0 0 0 0 0 0 0 0 chainB ( 7) TYR7 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 1 11 8 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS59 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 prot.sequence mkpvtlYdvaeyagvsYQTvSRvvnqasHvsaktrekveaamaelnyipnRcaqqlagkqsl/mkpvtlYdvaeyagvSYQtvsRvvnqashvsaktrekveaamaelnyipnrcaqqlagKqsl >1osl_B:lambda_repressor-like_DNA-binding_domains; title=SOLUTION STRUCTURE OF A DIMERIC LACTOSE DNA-BINDING DOMAIN COMPLEXED TO A NONSPECIFIC DNA SEQUENCE organism=ESCHERICHIA COLI DNA sequence DC(D1):DG(C18) DG(D2):DC(C17) DA(D3):DT(C16) DT(D4):DA(C15) DA(D5):DT(C14) DA(D6):DT(C13) DG(D7):DC(C12) DA(D8):DT(C11) DT(D9):DA(C10) DA(D10):DT(C9) DT(D11):DA(C8) DC(D12):DG(C7) DT(D13):DA(C6) DT(D14):DA(C5) DA(D15):DT(C4) DT(D16):DA(C3) DC(D17):DG(C2) DG(D18):DC(C1) chainB ( 7) TYR7 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 1 11 8 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS59 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 prot.sequence mkpvtlYdvaeyagvSYQtvsRvvnqashvsaktrekveaamaelnyipnrcaqqlagKqsl >1otc_AB:Nucleic_acid-binding_proteins; title=THE O. NOVA TELOMERE END BINDING PROTEIN COMPLEXED WITH SINGLE STRAND DNA organism=STERKIELLA NOVA DNA sequence DG(D1) DG(D2) DG(D3) DG(D4) DT(D5) DT(D6) DT(D7) DT(D8) DG(D9) DG(D10) DG(D11) DG(D12) chainA ( 24) ASP60 0 0 1 0 0 0 0 0 0 0 0 0 ( 26) THR62 0 0 0 5 0 0 0 0 0 0 0 0 ( 27) PHE63 0 0 0 0 0 0 0 0 0 0 9 0 ( 29) TYR65 0 0 0 10 0 0 0 0 0 0 0 0 ( 30) LYS66 0 0 0 0 0 0 0 2 0 0 0 0 ( 36) TYR72 0 0 0 0 0 0 0 7 0 0 0 0 ( 41) LYS77 0 0 6 0 0 0 0 0 0 0 0 0 ( 71) PHE107 0 0 0 0 0 0 0 0 0 0 5 14 ( 76) ILE112 0 0 0 0 0 0 0 0 0 0 6 0 ( 78) HIS114 0 0 0 0 0 0 0 0 0 0 2 0 ( 92) ARG128 0 2 0 0 0 0 0 0 0 0 0 0 ( 94) TYR130 0 37 0 0 0 0 0 0 0 0 0 0 ( 99) GLN135 0 11 0 0 0 0 0 0 0 0 0 0 (187) ASP223 0 0 9 11 0 0 0 0 0 0 0 0 (189) ASP225 0 0 15 0 0 0 0 0 0 0 0 0 (201) ASP237 0 0 0 0 0 0 0 0 0 1 0 0 (203) TYR239 0 0 0 0 0 0 0 0 0 44 0 0 (204) THR240 0 0 0 0 0 0 0 0 0 2 0 0 (222) LEU258 0 0 0 0 0 0 0 0 0 1 0 0 (224) LEU260 0 0 0 0 0 0 0 0 0 0 13 0 (225) LYS261 0 0 0 0 0 0 0 0 0 0 2 0 (236) ARG272 0 0 1 0 0 0 0 0 0 0 0 0 (238) ARG274 0 0 35 10 0 0 0 0 0 0 0 0 (239) SER275 0 0 0 6 0 0 0 0 0 0 0 0 (255) SER291 0 0 0 0 4 0 0 0 0 0 0 0 (256) HIS292 0 0 0 0 5 32 0 0 0 0 0 0 (257) TYR293 0 0 0 38 18 0 0 0 0 0 0 0 chainB ( 35) LYS44 0 0 0 0 0 0 0 0 1 0 0 0 ( 36) GLU45 0 0 0 0 0 0 3 0 15 0 0 0 ( 39) PRO48 0 0 0 0 0 0 0 0 1 0 0 0 ( 40) HIS49 0 0 0 0 0 0 0 0 11 0 0 0 ( 42) LEU51 0 0 0 0 0 0 0 0 3 0 0 0 ( 49) PHE58 0 0 0 0 0 0 0 0 2 0 0 0 ( 97) PHE106 0 0 0 0 0 0 0 0 11 0 0 0 (100) TYR109 0 0 0 0 0 0 0 0 0 4 0 0 (125) TYR134 0 0 0 0 32 4 1 0 0 0 0 0 (131) ARG140 0 0 0 0 0 0 0 0 0 36 0 0 (136) LYS145 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence eyvelakasltsaqpqhfyavviDaTFpYKtnqerYicslKivdptlylkqqkgagdasdyatlvlyakrFedlpIiHragdiirvhratlRlYngqrQfnanvfyssswalfstdkrsvtqeinnqdavsdttpfsfsskhatiekneisilqnlrkwanqyfssysvissdmytalnkaqaqkgDfDvvakilqvhelDeYTnelklkdasgqvfytlsLkLKfphvrtgevvRiRSatydetstqkkvlilSHYsniitfiqssklakelrakiqddhsvevaslkknvslnavvltevdkkhaalpstslqdlfhhadsdkelqaqdtfrtqfyvtkiepsdvkewvkgydrktkkssslkgasgkgdnifqvqflvkdastqlnnntyrvllytqdglganffnvkadnlhknadarkkledsaelltkfnsyvdavverrngfylikdtkliy/qqsafkqlytelfnnegdfskvssnlkkplkcyvKEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqe >1otc_B:Nucleic_acid-binding_proteins; title=THE O. NOVA TELOMERE END BINDING PROTEIN COMPLEXED WITH SINGLE STRAND DNA organism=STERKIELLA NOVA DNA sequence DG(D1) DG(D2) DG(D3) DG(D4) DT(D5) DT(D6) DT(D7) DT(D8) DG(D9) DG(D10) DG(D11) DG(D12) chainB ( 35) LYS44 0 0 0 0 0 0 0 0 1 0 0 0 ( 36) GLU45 0 0 0 0 0 0 3 0 15 0 0 0 ( 39) PRO48 0 0 0 0 0 0 0 0 1 0 0 0 ( 40) HIS49 0 0 0 0 0 0 0 0 11 0 0 0 ( 42) LEU51 0 0 0 0 0 0 0 0 3 0 0 0 ( 49) PHE58 0 0 0 0 0 0 0 0 2 0 0 0 ( 97) PHE106 0 0 0 0 0 0 0 0 11 0 0 0 (100) TYR109 0 0 0 0 0 0 0 0 0 4 0 0 (125) TYR134 0 0 0 0 32 4 1 0 0 0 0 0 (131) ARG140 0 0 0 0 0 0 0 0 0 36 0 0 (136) LYS145 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence qqsafkqlytelfnnegdfskvssnlkkplkcyvKEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqe >1oup_A:His-Me_finger_endonucleases; title=CRYSTAL STRUCTURE OF THE PERIPLASMIC ENDONUCLEASE VVN COMPLEXED WITH OCTAMER DOUBLE STRANDED DNA organism=VIBRIO VULNIFICUS DNA sequence DG(F9):DC(G8) DC(F10):DG(G7) DG(F11):DC(E6) DA(F12):DT(E5) DT(F13):DA(E4) DC(F14):DG(E3) DG(F15):DC(E2) DC(F16):DG(E1) chainA ( 54) ARG72 0 0 4 0 0 0 0 0 ( 82) LYS100 5 4 0 0 0 0 0 0 prot.sequence appssfsaakqqavkiyqdhpisfycgcdiewqgkkgipnletcgyqvrkqqtRasrieweavvpawqfghhrqcwqkggrKncskndqqfrlmeadlhnltpaigevngdrsnfnfsqwngvdgvsygrcemqvnfkqrkvmppdrargsiartylymsqeygfqlskqqqqlmqawnksypvdewectrddriakiqgnhnpfvqqscqtq >1ouq_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE organism=Enterobacteria phage P1 DNA sequence DG(D101):DC(X136) DA(D102):DT(X135) DT(D103):DA(X134) DA(D104):DT(X133) DA(D105):DT(X132) DC(D106):DG(X131) DT(D107):DA(X130) DT(D108):DA(X129) DC(D109):DG(X128) DG(D110):DC(X127) DT(D111):DA(X126) DA(D112):DT(X125) DT(D113):DA(X124) DA(D114):DT(X123) DG(D115):DC(X122) DC(D116):DG(X121) DA(D117):DT(X120) DT(D118):DA(X119) DA(D119):DT(X118) DC(D120):DG(X117) DA(D121):DT(X116) DT(D122):A3P(C115) DT(D123):DA(C114) DA(D124):DT(C113) DT(D125):DA(C112) DA(D126):DT(C111) DC(D127):DG(C110) DG(D128):DC(C109) DA(D129):DT(C108) DA(D130):UMP(C107) DG(D131):DC(C106) DT(D132):DA(C105) DT(D133):DA(C104) DA(D134):DT(C103) DT(D135):DA(C102) DC(D136):DG(C101) chainA ( 31) HIS40 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) MET44 0 0 0 0 0 0 0 0 0 0 4 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER47 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) THR87 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ARG241 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) LYS244 1 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) SER257 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) ARG259 0 0 0 0 0 0 2 9 15 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) GLU262 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (273) ARG282 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nlpalpvdatsdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnldsetgamvrlled >1ouq_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE organism=Enterobacteria phage P1 DNA sequence DG(C101):DC(D136) DA(C102):DT(D135) DT(C103):DA(D134) DA(C104):DT(D133) DA(C105):DT(D132) DC(C106):DG(D131) UMP(C107):DA(D130) DT(C108):DA(D129) DC(C109):DG(D128) DG(C110):DC(D127) DT(C111):DA(D126) DA(C112):DT(D125) DT(C113):DA(D124) DA(C114):DT(D123) A3P(C115):DT(D122) DT(X116):DA(D121) DG(X117):DC(D120) DT(X118):DA(D119) DA(X119):DT(D118) DT(X120):DA(D117) DG(X121):DC(D116) DC(X122):DG(D115) DT(X123):DA(D114) DA(X124):DT(D113) DT(X125):DA(D112) DA(X126):DT(D111) DC(X127):DG(D110) DG(X128):DC(D109) DA(X129):DT(D108) DA(X130):DT(D107) DG(X131):DC(D106) DT(X132):DA(D105) DT(X133):DA(D104) DA(X134):DT(D103) DT(X135):DA(D102) DC(X136):DG(D101) chainA ( 31) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 ( 32) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 4 0 0 0 0 0 0 0 0 0 0 ( 38) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 77) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (235) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 6 1 (248) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (250) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 9 2 0 0 0 0 0 0 (253) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 (273) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 (308) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 3 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 7 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG243 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 1 11 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 1 8 14 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nlpalpvdatsdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnIvmnyirnldsetgamvrlled >1ouq_EF:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE organism=Enterobacteria phage P1 DNA sequence DG(G101):DC(H136) DA(G102):DT(H135) DT(G103):DA(H134) DA(G104):DT(H133) DA(G105):DT(H132) DC(G106):DG(H131) UMP(G107):DA(H130) DT(G108):DA(H129) DC(G109):DG(H128) DG(G110):DC(H127) DT(G111):DA(H126) DA(G112):DT(H125) DT(G113):DA(H124) DA(G114):DT(H123) A3P(G115):DT(H122) DT(Y116):DA(H121) DG(Y117):DC(H120) DT(Y118):DA(H119) DA(Y119):DT(H118) DT(Y120):DA(H117) DG(Y121):DC(H116) DC(Y122):DG(H115) DT(Y123):DA(H114) DA(Y124):DT(H113) DT(Y125):DA(H112) DA(Y126):DT(H111) DC(Y127):DG(H110) DG(Y128):DC(H109) DA(Y129):DT(H108) DA(Y130):DT(H107) DG(Y131):DC(H106) DT(Y132):DA(H105) DT(Y133):DA(H104) DA(Y134):DT(H103) DT(Y135):DA(H102) DC(Y136):DG(H101) chainE ( 20) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 ( 21) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 2 0 0 0 0 0 0 0 0 0 0 ( 27) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 66) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (224) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 9 1 (237) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (239) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 14 8 2 0 0 0 0 0 0 (242) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 (262) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 (296) THR316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 7 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 0 4 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 7 12 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ASN319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence devrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwTNvnivmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvNIvmnyirnldsetgamvrlled >1ouz_A:IHF-like_DNA-binding_proteins; title=CRYSTAL STRUCTURE OF A MUTANT IHF (BETAE44A) COMPLEXED WITH A VARIANT H' SITE (T44A) organism=ESCHERICHIA COLI DNA sequence DG(C49):DC(E49) DG(C48):DC(E48) DT(C47):DA(E47) DG(C46):DC(E46) DC(C45):DG(E45) DT(C44):DA(E44) DA(C43):DT(E43) DC(C42):DG(E42) DA(C41):DT(E41) DA(C40):DT(E40) DA(C39):DT(E39) DT(C38):DA(E38) DT(C37):DA(E37) DG(C36):DC(E36) DA(C35):DT(E35) DT(C34):DA(E34) DA(C33):DT(E33) DA(C32):DT(E32) DG(C31):DC(E31) DC(C30):DG(E30) DA(C29):DT(D29) DA(C28):DT(D28) DT(C27):DA(D27) DG(C26):DC(D26) DC(C25):DG(D25) DT(C24):DA(D24) DT(C23):DA(D23) DT(C22):DA(D22) DT(C21):DA(D21) DT(C20):DA(D20) DT(C19):DA(D19) DG(C18):DC(D18) DG(C17):DC(D17) DC(C16):DG(D16) chainA ( 59) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN64 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 23 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS66 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence altkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenaspk >1ouz_AB:IHF-like_DNA-binding_proteins; title=CRYSTAL STRUCTURE OF A MUTANT IHF (BETAE44A) COMPLEXED WITH A VARIANT H' SITE (T44A) organism=ESCHERICHIA COLI DNA sequence DG(C49):DC(E49) DG(C48):DC(E48) DT(C47):DA(E47) DG(C46):DC(E46) DC(C45):DG(E45) DT(C44):DA(E44) DA(C43):DT(E43) DC(C42):DG(E42) DA(C41):DT(E41) DA(C40):DT(E40) DA(C39):DT(E39) DT(C38):DA(E38) DT(C37):DA(E37) DG(C36):DC(E36) DA(C35):DT(E35) DT(C34):DA(E34) DA(C33):DT(E33) DA(C32):DT(E32) DG(C31):DC(E31) DC(C30):DG(E30) DA(C29):DT(D29) DA(C28):DT(D28) DT(C27):DA(D27) DG(C26):DC(D26) DC(C25):DG(D25) DT(C24):DA(D24) DT(C23):DA(D23) DT(C22):DA(D22) DT(C21):DA(D21) DT(C20):DA(D20) DT(C19):DA(D19) DG(C18):DC(D18) DG(C17):DC(D17) DC(C16):DG(D16) chainA ( 59) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN64 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 23 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS66 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 46) ARG46 0 0 0 0 17 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 14 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence altkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenaspk/mtkselierlatqqshipaktvedavkemlehmastlaqgeriaiRgfgsfslhyrapRtgRNPKtgdkvelegkyvphfkpgkelrdraniyg >1owf_A:IHF-like_DNA-binding_proteins; title=CRYSTAL STRUCTURE OF A MUTANT IHF (BETAE44A) COMPLEXED WITH THE NATIVE H' SITE organism=ESCHERICHIA COLI DNA sequence DG(D16):DC(C16) DC(D17):DG(C17) DC(D18):DG(C18) DA(D19):DT(C19) DA(D20):DT(C20) DA(D21):DT(C21) DA(D22):DT(C22) DA(D23):DT(C23) DA(D24):DT(C24) DG(D25):DC(C25) DC(D26):DG(C26) DA(D27):DT(C27) DT(D28):DA(C28) DT(D29):DA(C29) DG(E30):DC(C30) DC(E31):DG(C31) DT(E32):DA(C32) DT(E33):DA(C33) DA(E34):DT(C34) DT(E35):DA(C35) DC(E36):DG(C36) DA(E37):DT(C37) DA(E38):DT(C38) DT(E39):DA(C39) DT(E40):DA(C40) DT(E41):DA(C41) DG(E42):DC(C42) DT(E43):DA(C43) DT(E44):DA(C44) DG(E45):DC(C45) DC(E46):DG(C46) DA(E47):DT(C47) DC(E48):DG(C48) DC(E49):DG(C49) chainA ( 59) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 20 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 ( 72) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence altkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenaspk >1owf_AB:IHF-like_DNA-binding_proteins; title=CRYSTAL STRUCTURE OF A MUTANT IHF (BETAE44A) COMPLEXED WITH THE NATIVE H' SITE organism=ESCHERICHIA COLI DNA sequence DG(C49):DC(E49) DG(C48):DC(E48) DT(C47):DA(E47) DG(C46):DC(E46) DC(C45):DG(E45) DA(C44):DT(E44) DA(C43):DT(E43) DC(C42):DG(E42) DA(C41):DT(E41) DA(C40):DT(E40) DA(C39):DT(E39) DT(C38):DA(E38) DT(C37):DA(E37) DG(C36):DC(E36) DA(C35):DT(E35) DT(C34):DA(E34) DA(C33):DT(E33) DA(C32):DT(E32) DG(C31):DC(E31) DC(C30):DG(E30) DA(C29):DT(D29) DA(C28):DT(D28) DT(C27):DA(D27) DG(C26):DC(D26) DC(C25):DG(D25) DT(C24):DA(D24) DT(C23):DA(D23) DT(C22):DA(D22) DT(C21):DA(D21) DT(C20):DA(D20) DT(C19):DA(D19) DG(C18):DC(D18) DG(C17):DC(D17) DC(C16):DG(D16) chainA ( 59) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN64 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 20 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS66 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 46) ARG46 0 0 0 0 5 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 15 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence altkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenaspk/mtkselierlatqqshipaktvedavkemlehmastlaqgeriaiRgfgsfslhyrapRtgRNPKtgdkvelegkyvphfkpgkelrdraniyg >1owf_B:IHF-like_DNA-binding_proteins; title=CRYSTAL STRUCTURE OF A MUTANT IHF (BETAE44A) COMPLEXED WITH THE NATIVE H' SITE organism=ESCHERICHIA COLI DNA sequence DG(C49):DC(E49) DG(C48):DC(E48) DT(C47):DA(E47) DG(C46):DC(E46) DC(C45):DG(E45) DA(C44):DT(E44) DA(C43):DT(E43) DC(C42):DG(E42) DA(C41):DT(E41) DA(C40):DT(E40) DA(C39):DT(E39) DT(C38):DA(E38) DT(C37):DA(E37) DG(C36):DC(E36) DA(C35):DT(E35) DT(C34):DA(E34) DA(C33):DT(E33) DA(C32):DT(E32) DG(C31):DC(E31) DC(C30):DG(E30) DA(C29):DT(D29) DA(C28):DT(D28) DT(C27):DA(D27) DG(C26):DC(D26) DC(C25):DG(D25) DT(C24):DA(D24) DT(C23):DA(D23) DT(C22):DA(D22) DT(C21):DA(D21) DT(C20):DA(D20) DT(C19):DA(D19) DG(C18):DC(D18) DG(C17):DC(D17) DC(C16):DG(D16) chainB ( 46) ARG46 0 0 0 0 5 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 15 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mtkselierlatqqshipaktvedavkemlehmastlaqgeriaiRgfgsfslhyrapRtgRNPKtgdkvelegkyvphfkpgkelrdraniyg >1owg_A:IHF-like_DNA-binding_proteins; title=CRYSTAL STRUCTURE OF WT IHF COMPLEXED WITH AN ALTERED H' SITE (T44A) organism=ESCHERICHIA COLI DNA sequence DG(D16):DC(C16) DC(D17):DG(C17) DC(D18):DG(C18) DA(D19):DT(C19) DA(D20):DT(C20) DA(D21):DT(C21) DA(D22):DT(C22) DA(D23):DT(C23) DA(D24):DT(C24) DG(D25):DC(C25) DC(D26):DG(C26) DA(D27):DT(C27) DT(D28):DA(C28) DT(D29):DA(C29) DG(E30):DC(C30) DC(E31):DG(C31) DT(E32):DA(C32) DT(E33):DA(C33) DA(E34):DT(C34) DT(E35):DA(C35) DC(E36):DG(C36) DA(E37):DT(C37) DA(E38):DT(C38) DT(E39):DA(C39) DT(E40):DA(C40) DT(E41):DA(C41) DG(E42):DC(C42) DT(E43):DA(C43) DA(E44):DT(C44) DG(E45):DC(C45) DC(E46):DG(C46) DA(E47):DT(C47) DC(E48):DG(C48) DC(E49):DG(C49) chainA ( 59) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 22 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 ( 72) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence altkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenaspk >1owg_AB:IHF-like_DNA-binding_proteins; title=CRYSTAL STRUCTURE OF WT IHF COMPLEXED WITH AN ALTERED H' SITE (T44A) organism=ESCHERICHIA COLI DNA sequence DG(D16):DC(C16) DC(D17):DG(C17) DC(D18):DG(C18) DA(D19):DT(C19) DA(D20):DT(C20) DA(D21):DT(C21) DA(D22):DT(C22) DA(D23):DT(C23) DA(D24):DT(C24) DG(D25):DC(C25) DC(D26):DG(C26) DA(D27):DT(C27) DT(D28):DA(C28) DT(D29):DA(C29) DG(E30):DC(C30) DC(E31):DG(C31) DT(E32):DA(C32) DT(E33):DA(C33) DA(E34):DT(C34) DT(E35):DA(C35) DC(E36):DG(C36) DA(E37):DT(C37) DA(E38):DT(C38) DT(E39):DA(C39) DT(E40):DA(C40) DT(E41):DA(C41) DG(E42):DC(C42) DT(E43):DA(C43) DA(E44):DT(C44) DG(E45):DC(C45) DC(E46):DG(C46) DA(E47):DT(C47) DC(E48):DG(C48) DC(E49):DG(C49) chainA ( 59) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 22 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 ( 72) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 46) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 17 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN63 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO64 0 0 0 0 0 0 0 0 0 0 0 0 36 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence altkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenaspk/mtkselierlatqqshipaktvedavkemlehmastlaqgerieiRgfgsfslhyrapRtgRNPKtgdkvelegkyvphfkpgkelrdraniyg >1owr_P:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF HUMAN NFAT1 BOUND MONOMERICALLY TO DNA organism=Homo sapiens DNA sequence DG(E4003):DC(F5015) DC(E4004):DG(F5014) DT(E4005):DA(F5013) DG(E4006):DC(F5012) DG(E4007):DC(F5011) DA(E4008):DT(F5010) DA(E4009):DT(F5009) DA(E4010):DT(F5008) DA(E4011):DT(F5007) DA(E4012):DT(F5006) DT(E4013):DA(F5005) DA(E4014):DT(F5004) DG(E4015):DC(F5003) chainP ( 27) ARG421 0 0 0 4 12 4 0 0 0 0 0 0 0 ( 30) TYR424 0 0 0 0 0 4 7 0 0 0 0 0 0 ( 32) THR426 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 33) GLU427 0 0 0 1 5 2 0 0 0 0 0 0 0 ( 36) ARG430 0 0 7 10 3 0 0 0 0 0 0 0 0 (143) ARG537 0 0 0 0 0 0 0 0 0 1 1 0 0 (177) GLN571 0 0 0 0 2 7 0 0 0 0 0 0 0 (178) ARG572 0 0 0 0 0 0 0 5 7 0 0 0 0 prot.sequence vplewplssqsgsyelrievqpkphhRahYeTEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQRsahelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv >1ozj_AB:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD3-MH1 BOUND TO DNA AT 2.4 A RESOLUTION organism=Homo sapiens DNA sequence DT(C1001):DA(D2015) DC(C1002):DG(D2014) DA(C1003):DT(D2013) DG(C1004):DC(D2012) DT(C1005):DA(D2011) DC(C1006):DG(D2010) DT(C1007):DA(D2009) DA(C1008):DT(D2008) DG(C1009):DC(D2007) DA(C1010):DT(D2006) DC(C1011):DG(D2005) DA(C1012):DT(D2004) DT(C1013):DA(D2003) DA(C1014):DT(D2002) DC(C1015):DG(D2001) chainA ( 68) ARG74 0 0 0 0 0 0 0 0 0 2 14 15 0 0 0 ( 70) GLN76 0 0 0 0 0 0 5 8 2 0 0 0 0 0 0 ( 73) HIS79 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 75) LYS81 0 0 0 0 0 0 0 6 7 4 0 0 0 0 0 chainB ( 66) ARG74 0 0 6 12 2 0 0 0 0 0 0 0 0 0 0 ( 68) GLN76 0 0 0 0 0 2 8 5 0 0 0 0 0 0 0 ( 73) LYS81 0 0 0 0 8 9 5 0 0 0 0 0 0 0 0 prot.sequence ftppivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvsHrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet/ppivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvshrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet >1ozj_B:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD3-MH1 BOUND TO DNA AT 2.4 A RESOLUTION organism=Homo sapiens DNA sequence DT(C1001):DA(D2015) DC(C1002):DG(D2014) DA(C1003):DT(D2013) DG(C1004):DC(D2012) DT(C1005):DA(D2011) DC(C1006):DG(D2010) DT(C1007):DA(D2009) DA(C1008):DT(D2008) DG(C1009):DC(D2007) DA(C1010):DT(D2006) DC(C1011):DG(D2005) DA(C1012):DT(D2004) DT(C1013):DA(D2003) DA(C1014):DT(D2002) DC(C1015):DG(D2001) chainB ( 66) ARG74 0 0 6 12 2 0 0 0 0 0 0 0 0 0 0 ( 68) GLN76 0 0 0 0 0 2 8 5 0 0 0 0 0 0 0 ( 73) LYS81 0 0 0 0 8 9 5 0 0 0 0 0 0 0 0 prot.sequence ppivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvshrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet >1p34_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS439 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 11) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakavtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkGnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/rkesyaiyvykvlkqvhpdtgisskAmsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakavtimpkdiqlarrirge/lrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssragLqfpvgrvhrllrKgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ksRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >1p3a_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 2) HIS439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) HIS639 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 12) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakhvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/esyaiyvykvlkqvhpdtgisskamsimNsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakhvtimpkdiqlarrirgera/vlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/trssraglqfpVgrvhrllrkgnyAervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/kesyaiyvykvLkqvhpdtgisskAmsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1p3b_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DG(J271):DC(I22) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) HIS439 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 65) ARG877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 4) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 11) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence kpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/niQGitkpairrlarrggvkaisgliyeEtrgvlkvflenvirdavTytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/srkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqTavrlllpgelakhavsegtkavtkytsak/kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/lrdniqgitkPairrlarrggvkaisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqFpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/kesyaiyvykVlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1p3b_F:Histone-fold; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DG(J271):DC(I22) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainF ( 11) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lrdniqgitkPairrlarrggvkaisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >1p3f_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) HIS439 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 3) HIS639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 4) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 12) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rdNIqgitkpairrlarrggvkcisgliYeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktRSsraglqfpvgrvhrllrkgnyaerVgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/esYAiyvykvlkqvhpdtgisskamsimNsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkPairrlarrggvkcisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglQfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ksRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1p3g_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR441 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 17) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dnIQgitkpairrlarrggvkeisgliYeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/akTRssraglqfpvgrvhrllrkgnyaErvgagapvylaavleylTaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/rkESyaiyvykvlkqvhpdtgisskamSimnsfvndvferiageaSrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkPairrlarrggvkeisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvGrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/kesyaiyvykvlkqvhPdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1p3i_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS439 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 28) ARG842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG1230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 9) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) TYR641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 34) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 9) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 2) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dNIqgitkpairrlarrggvkhisgliYeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/ksRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/tgeskkphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkPairrlarrggvkhisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglQfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/sRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1p3k_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 3) HIS639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 4) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 11) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ARG235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG1042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence hRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvaimpkdiqlarrirgera/dNiqgitkpairrlarrggvkrisglIyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfgg/kTrssraglqfpvgrvhrllrkgnyaErvgagapvylaavleylTaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/kEsyaiyvykvlkqvhpdtgisskamSimnsfvndvferiageaSrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvaimpkdiqlarrirgera/lrdniqgitkPaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/srkesyaiyvykvlkqvhpdtgisskamSimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1p3k_G:Histone-fold; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=? DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainG ( 29) ARG1042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk >1p3l_A:Histone-fold; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvhimpkdiqlarrirgera >1p3l_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 4) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 13) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvhimpkdiqlarrirgera/dnIqgitkpairrlarrggvkrisgliYeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/ktRssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltAeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/keSyaiyvykvlkqvhpdtgisskamsImnsfvndvferiageasRlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvhimpkdiqlarrirgera/kvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/rakaktrssragLqfpvgrvhrllrKgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ksRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1p3m_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 4) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR441 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) HIS639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 4) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 12) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrviimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/kesyaiyvykvlkqvhpdtgisskamsiMnsfvndvferiageasrlahynkrstitsreiqtAvrlllpgelakhavsegtkavtkytsak/kpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrviimpkdiqlarrirgera/vlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfPvgrvhrllrkgnYaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/esyaiyvykvlKqvhpdtgisskaMsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1p3o_A:Histone-fold; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR441 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >1p3o_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 64) ARG877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 9) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG1042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggakRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/kesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtAvrlllpgelakhavsegtkavtkytsak/hRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkPairrlarrggakRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/kesyaiyvykvlkqvhpdtgisskamsiMnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1p3p_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 5) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR441 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 64) ARG877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 5) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 30) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 12) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 4) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/lrdniqgitkpairrlarrggikRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqTavrlllpgelakhavsegtkavtkytsak/kkphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkPairrlarrggikRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssragLqfpvgrvhrllrKgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/rksRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1p3p_H:Histone-fold; title=CRYSTALLOGRAPHIC STUDIES OF NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS organism=? DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainH ( 4) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rksRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1p47_A:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF TANDEM ZIF268 MOLECULES COMPLEXED TO DNA organism=Mus musculus DNA sequence DT(C2):DA(D63) DG(C3):DC(D62) DG(C4):DC(D61) DC(C5):DG(D60) DG(C6):DC(D59) DT(C7):DA(D58) DG(C8):DC(D57) DG(C9):DC(D56) DG(C10):DC(D55) DC(C11):DG(D54) DG(C12):DC(D53) DG(C13):DC(D52) DC(C14):DG(D51) DG(C15):DC(D50) DT(C16):DA(D49) DG(C17):DC(D48) DG(C18):DC(D47) DG(C19):DC(D46) DC(C20):DG(D45) DG(C21):DC(D44) DT(C22):DA(D43) chainA ( 17) ARG118 0 0 0 0 0 0 0 0 0 11 11 2 0 0 0 0 0 0 0 0 0 ( 19) ASP120 0 0 0 0 0 0 0 0 0 0 1 10 4 0 0 0 0 0 0 0 0 ( 20) GLU121 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG124 0 0 0 0 0 0 0 7 11 5 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG146 0 0 0 0 0 0 8 14 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASP148 0 0 0 0 0 0 0 2 6 4 0 0 0 0 0 0 0 0 0 0 0 ( 48) HIS149 0 0 0 0 0 28 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) THR152 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG174 0 0 0 13 13 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ASP176 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) GLU177 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ARG180 0 15 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence erpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRsDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlrq >1p47_AB:beta-beta-alpha_zinc_fingers;C2H2_and_C2HC_zinc_fingers; title=CRYSTAL STRUCTURE OF TANDEM ZIF268 MOLECULES COMPLEXED TO DNA organism=Mus musculus DNA sequence DA(D43):DT(C22) DC(D44):DG(C21) DG(D45):DC(C20) DC(D46):DG(C19) DC(D47):DG(C18) DC(D48):DG(C17) DA(D49):DT(C16) DC(D50):DG(C15) DG(D51):DC(C14) DC(D52):DG(C13) DC(D53):DG(C12) DG(D54):DC(C11) DC(D55):DG(C10) DC(D56):DG(C9) DC(D57):DG(C8) DA(D58):DT(C7) DC(D59):DG(C6) DG(D60):DC(C5) DC(D61):DG(C4) DC(D62):DG(C3) DA(D63):DT(C2) chainA ( 17) ARG118 0 0 0 0 0 0 0 0 0 2 11 11 0 0 0 0 0 0 0 0 0 ( 19) ASP120 0 0 0 0 0 0 0 0 4 10 1 0 0 0 0 0 0 0 0 0 0 ( 20) GLU121 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 ( 23) ARG124 0 0 0 0 0 0 0 0 0 0 0 5 11 7 0 0 0 0 0 0 0 ( 45) ARG146 0 0 0 0 0 0 0 0 0 0 0 0 3 14 8 0 0 0 0 0 0 ( 47) ASP148 0 0 0 0 0 0 0 0 0 0 0 4 6 2 0 0 0 0 0 0 0 ( 48) HIS149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 28 0 0 0 0 0 ( 51) THR152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 73) ARG174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 13 0 0 0 ( 75) ASP176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 ( 76) GLU177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 ( 79) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 15 0 chainB ( 16) ARG118 6 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ASP120 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) GLU121 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG124 0 0 5 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG146 0 0 0 2 11 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) SER147 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASP148 0 0 2 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) HIS149 0 0 0 0 0 11 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) THR152 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG174 0 0 0 0 0 0 11 11 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP176 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLU177 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG180 0 0 0 0 0 0 0 0 10 12 7 0 0 0 0 0 0 0 0 0 0 prot.sequence erpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRsDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlrq/rpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihl >1p4e_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=FLPE W330F MUTANT-DNA HOLLIDAY JUNCTION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(H18):DT(I16) DA(H19):DT(I15) DA(H20):DT(I14) DG(H21):DC(E13) DA(H22):DT(E12) DA(H23):DT(E11) DT(H24):DA(E10) DA(H25):DT(E9) DG(H26):DC(E8) DG(H27):DC(E7) DA(H28):DT(E6) DA(H29):DT(E5) DC(H30):DG(E4) DT(H31):DA(E3) DT(H32):DA(E2) chainA ( 54) ALA55 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 55) THR56 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 57) MET58 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 58) SER59 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 ( 59) TYR60 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 61) THR62 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 81) LYS82 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 (160) ARG170 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 (213) LYS223 0 0 1 6 4 0 0 0 0 0 0 0 0 0 0 (268) ASN278 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 (271) ARG281 0 0 0 0 0 0 0 0 24 19 7 0 0 0 0 (272) SER282 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (274) ASN284 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (275) LYS285 0 0 0 0 0 0 0 0 0 0 0 7 7 2 0 (321) SER331 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sqfdilcktppkvlvrqfverferpsgekiascaaeltylcwmithngtaikrATfMSYnTiisnslsfdivnkslqfkyKtqkatileaslkklipaweftiipyngqsditdivsslqlqfesgnshskkmlkallsegesiweitekilnsfeytsRftktktlyqflflatfincgrfsdiknvdpksfklvqnkylgviiqclvtetKtsvsrhiyffsargridplvyldeflrnsepvlkrvnrtgnsssnkqeyqllkdNlvRSyNKalkknapypifaikngpkshigrhlmtsflsmkglteltnvvgnfSdkqitaipdhyfalvsryyaydpiskemialkdetnpieewqhieqlkgsaegsirypawngiisqevldylssyinrr >1p59_A:DNA-glycosylase; title=STRUCTURE OF A NON-COVALENT ENDONUCLEASE III-DNA COMPLEX organism=Geobacillus stearothermophilus DNA sequence DA(B2):DT(C22) DG(B3):DC(C21) DA(B4):DG(C19) DC(B5):DA(C17) DG(B6):DC(C16) DG(B8):DC(C15) DG(B9):DG(C13) chainA ( 41) ALA41 0 0 1 0 0 0 0 ( 42) GLN42 0 0 23 4 6 0 0 ( 43) CYS43 0 0 0 0 1 0 0 ( 44) THR44 0 0 0 1 0 0 0 ( 82) LEU82 0 0 2 8 17 0 0 prot.sequence mltkqqirycldemakmfpdahcelvhrnpfelliavvlsAQCTdalvnkvtkrlfekyrtphdyiavpleeleqdirsigLyrnkarniqklcamlidkyngevprdrdelmklpgvgrktanvvvstafgvpaiavdthvervskrlgfcrwddsvlevektlmkiipkeewsithhrmiffgryhckaqspqcpscpllhlcregkkrmrk >1p5w_A:ssDNA_viruses; title=THE STRUCTURES OF HOST RANGE CONTROLLING REGIONS OF THE CAPSIDS OF CANINE AND FELINE PARVOVIRUSES AND MUTANTS organism=Canine parvovirus DNA sequence DT(B2) DA(B3) DC(B4) DC(B5) DT(B6) DC(B7) DT(B8) DT(B9) DG(B10) DC(B11) chainA (105) PHE141 4 0 0 0 0 0 0 0 0 0 (107) GLN143 4 0 0 0 0 0 0 0 0 0 (137) LEU177 12 0 0 0 0 0 0 0 0 0 (139) SER179 3 0 0 0 0 0 0 0 0 0 (142) THR182 0 0 0 1 0 0 0 0 0 0 (204) TYR244 0 0 0 5 0 0 0 0 0 0 (223) THR263 11 0 0 0 0 0 0 0 0 0 (226) PHE266 5 29 0 0 0 0 0 0 0 0 (227) PHE267 0 3 0 0 0 0 0 0 0 0 (452) ASN492 0 0 5 0 0 0 0 0 0 0 (453) ASN493 0 7 2 0 0 0 0 0 0 0 (455) PRO495 3 0 0 0 0 0 0 0 0 0 prot.sequence gvgistgtfnnqtefkflengwveitanssrlvhlnmpesenyrrvvvnnmdktavrgnmalddihaqivtpwslvdanawgvwfnpgdwqlivntmselhlvsFeQeifnvvlktvsepptkvynndltaslmvaLdSnnTmpftpaamrsetlgfypwkptiptpwryyfqwdrtlipshtgtsgtptniyhgtdpddvqfYtiensvpvhllrtgdefaTgtFFfdckpcrlthtwqtnralglppflnslpqsegatnfgdigvqqdkrrgvtqmgntnyiteatimrpaevgysapyysfeastqgpfktpiaagrggaqtdenqaadgnpryafgrqhgqkttttgetperftyiahqdtgrypegdwiqninfnlpvtndnvllptdpiggktginytnifntygpltalnnvppvypngqiwdkefdtdlkprlhvnapfvcqNNcPgqlfvkvapnltneydpdasanmsrivtysdfwwkgklvfkaklrashtwnpiqqmsinvdnqfnyvpsniggmkivyeksqlaprkly >1p71_AB:IHF-like_DNA-binding_proteins; title=ANABAENA HU-DNA CORCRYSTAL STRUCTURE (TR3) organism=Anabaena sp. DNA sequence DG(D2):DC(C20) DC(D3):DA(C19) DT(D4):DC(C18) DT(D5):DG(C17) DA(D6):DT(C16) DT(D7):DT(C15) DC(D8):DG(C14) DA(D9):DT(C13) DA(D10):DT(C12) DT(D11):DT(C11) DT(D12):DA(C10) DT(D13):DA(C9) DG(D14):DC(C8) DT(D15):DT(C7) DT(D16):DA(C6) DG(D17):DT(C5) DC(D18):DT(C4) DA(D19):DC(C3) DC(D20):DG(C2) chainA ( 58) ARG58 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 ( 61) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 ( 63) PRO63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 15 0 0 0 ( 64) LYS64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 ( 71) ILE71 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainB ( 58) ARG58 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 ( 61) ARG61 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) PRO63 0 0 0 15 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS64 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ILE71 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnkgelvdavaekasvtkkqadavltaaletiieavssgdkvtlvgfgsfesrerkaRegRnPKtnekmeIpatrvpafsagklfrekvappka/mnkgelvdavaekasvtkkqadavltaaletiieavssgdkvtlvgfgsfesrerkaRegRnPKtnekmeIpatrvpafsagklfrekvappk >1p71_B:IHF-like_DNA-binding_proteins; title=ANABAENA HU-DNA CORCRYSTAL STRUCTURE (TR3) organism=Anabaena sp. DNA sequence DG(D2):DC(C20) DC(D3):DA(C19) DT(D4):DC(C18) DT(D5):DG(C17) DA(D6):DT(C16) DT(D7):DT(C15) DC(D8):DG(C14) DA(D9):DT(C13) DA(D10):DT(C12) DT(D11):DT(C11) DT(D12):DA(C10) DT(D13):DA(C9) DG(D14):DC(C8) DT(D15):DT(C7) DT(D16):DA(C6) DG(D17):DT(C5) DC(D18):DT(C4) DA(D19):DC(C3) DC(D20):DG(C2) chainB ( 58) ARG58 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 ( 61) ARG61 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) PRO63 0 0 0 15 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS64 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ILE71 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnkgelvdavaekasvtkkqadavltaaletiieavssgdkvtlvgfgsfesrerkaRegRnPKtnekmeIpatrvpafsagklfrekvappk >1p78_AB:IHF-like_DNA-binding_proteins; title=ANABAENA HU-DNA COCRYSTAL STRUCTURE (AHU2) organism=Anabaena sp. DNA sequence DT(C1):DA(D19) DG(C2):DC(D18) DC(C3):DG(D17) DA(C4):DT(D16) DT(C5):DT(D15) DA(C6):DG(D14) DT(C7):DT(D13) DC(C8):DT(D12) DA(C9):DT(D11) DA(C10):DA(D10) DT(C11):DA(D9) DT(C12):DC(D8) DT(C13):DT(D7) DG(C14):DA(D6) DT(C15):DT(D5) DT(C16):DA(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA ( 58) ARG58 0 0 0 0 0 8 4 0 4 0 0 0 0 0 0 0 0 0 0 ( 61) ARG61 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) PRO63 0 0 0 7 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS64 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ILE71 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 58) ARG58 0 0 0 0 0 0 0 0 0 0 2 0 3 9 0 0 0 0 0 ( 61) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 ( 63) PRO63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 9 0 0 0 ( 64) LYS64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 ( 71) ILE71 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mnkgelvdavaekasvtkkqadavltaaletiieavssgdkvtlvgfgsfesrerkaRegRnPKtnekmeIpatrvpafsagklfrekvapp/mnkgelvdavaekasvtkkqadavltaaletiieavssgdkvtlvgfgsfesrerkaRegRnPKtnekmeIpatrvpafsagklfrekvapp >1p78_B:IHF-like_DNA-binding_proteins; title=ANABAENA HU-DNA COCRYSTAL STRUCTURE (AHU2) organism=Anabaena sp. DNA sequence DT(C1):DA(D19) DG(C2):DC(D18) DC(C3):DG(D17) DA(C4):DT(D16) DT(C5):DT(D15) DA(C6):DG(D14) DT(C7):DT(D13) DC(C8):DT(D12) DA(C9):DT(D11) DA(C10):DA(D10) DT(C11):DA(D9) DT(C12):DC(D8) DT(C13):DT(D7) DG(C14):DA(D6) DT(C15):DT(D5) DT(C16):DA(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainB ( 58) ARG58 0 0 0 0 0 0 0 0 0 0 2 0 3 9 0 0 0 0 0 ( 61) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 ( 63) PRO63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 9 0 0 0 ( 64) LYS64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 ( 71) ILE71 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mnkgelvdavaekasvtkkqadavltaaletiieavssgdkvtlvgfgsfesrerkaRegRnPKtnekmeIpatrvpafsagklfrekvapp >1p7d_B:DNA_breaking-rejoining_enzymes; title=CRYSTAL STRUCTURE OF THE LAMBDA INTEGRASE (RESIDUES 75-356) BOUND TO DNA organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DA(F21):DG(F19) DG(F22):DC(F18) DC(F23):DG(F17) DA(F24):DT(F16) DA(F25):DT(F15) DA(F26):DT(F14) DA(F27):DT(E13) DA(F28):DT(E12) DA(F29):DT(E11) DG(F30):DC(E10) DT(F31):DA(E9) DT(F32):DA(E8) DG(F33):DC(E7) DG(F34):DC(E6) DC(F35):DG(E5) DA(F36):DT(E4) DT(F37):DA(E3) DT(F38):DA(E2) DG(F39):DC(E1) chainB ( 22) LYS95 0 0 0 0 0 0 0 0 8 8 2 0 0 0 0 0 0 0 0 ( 23) THR96 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN99 0 0 0 0 0 0 0 8 14 2 0 0 0 0 0 0 0 0 0 ( 27) TYR100 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER102 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 30) LYS103 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 62) ALA138 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 ( 63) SER139 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 66) LEU142 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 (159) LYS235 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 (210) SER286 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (211) ARG287 0 0 0 0 0 0 0 0 0 0 0 17 12 5 0 0 0 0 0 (212) TYR288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (259) SER335 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) GLN341 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mtlhswldryekilasrgikqKTliNYmSKikairrglpdaplttkeiaamlngyidegkaASakLirstlsdafreaiaeghittnhvaatraaksevrrsrltadeylkiyqaaesspcwlrlamelavvtgqrvgdlcemkwsdivdgylyveqsKtgvkiaiptalhidalgismketldkckeilggetiiastrreplssgtvSRYfmrarkasglsfegdpptfhelrslsarlyekqisdkfaqhllghkSdtmasQrddrgrewdkieik >1p7h_L:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF NFAT1 BOUND AS A DIMER TO THE HIV-1 LTR KB ELEMENT organism=Homo sapiens DNA sequence DT(D3):DA(C15) DG(D4):DC(C14) DG(D5):DC(C13) DA(D6):DT(C12) DA(D7):DT(C11) DA(D8):DT(C10) DG(D9):DC(C9) DT(D10):DA(C8) DC(D11):DG(C7) DC(D12):DG(C6) DC(D13):DG(C5) DC(D14):DG(C4) DA(D15):DT(C3) DT(B1):DA(C2) DT(B2):DA(C1) DT(B3):DA(A15) DG(B4):DC(A14) DG(B5):DC(A13) DA(B6):DT(A12) DA(B7):DT(A11) DA(B8):DT(A10) DG(B9):DC(A9) DT(B10):DA(A8) DC(B11):DG(A7) DC(B12):DG(A6) DC(B13):DG(A5) DC(B14):DG(A4) chainL ( 29) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 4 0 0 0 0 0 0 0 0 ( 32) TYR424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 ( 34) THR426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 35) GLU427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 ( 38) ARG430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 3 0 0 0 0 0 0 0 0 0 (145) ARG537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 (179) GLN571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 1 0 0 0 0 0 0 0 (272) LYS664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (273) ARG665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence ssvplewplssqsgsyelrievqpkphhRahYeTEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQrsahelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingKRkrsqpqhftyhpv >1p7h_LN:p53-like_transcription_factors;E_set_domains;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF NFAT1 BOUND AS A DIMER TO THE HIV-1 LTR KB ELEMENT organism=Homo sapiens DNA sequence DT(D3):DA(C15) DG(D4):DC(C14) DG(D5):DC(C13) DA(D6):DT(C12) DA(D7):DT(C11) DA(D8):DT(C10) DG(D9):DC(C9) DT(D10):DA(C8) DC(D11):DG(C7) DC(D12):DG(C6) DC(D13):DG(C5) DC(D14):DG(C4) DA(D15):DT(C3) DT(B1):DA(C2) DT(B2):DA(C1) DT(B3):DA(A15) DG(B4):DC(A14) DG(B5):DC(A13) DA(B6):DT(A12) DA(B7):DT(A11) DA(B8):DT(A10) DG(B9):DC(A9) DT(B10):DA(A8) DC(B11):DG(A7) DC(B12):DG(A6) DC(B13):DG(A5) DC(B14):DG(A4) chainL ( 29) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 4 0 0 0 0 0 0 0 0 ( 32) TYR424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 ( 34) THR426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 35) GLU427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 ( 38) ARG430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 3 0 0 0 0 0 0 0 0 0 (145) ARG537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 (179) GLN571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 1 0 0 0 0 0 0 0 (272) LYS664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (273) ARG665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainN ( 29) ARG421 0 0 0 0 0 0 0 0 4 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR424 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLU427 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG430 0 0 0 0 0 0 0 0 0 4 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) ARG537 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) GLN571 0 0 0 0 0 0 0 1 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) LYS664 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (273) ARG665 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssvplewplssqsgsyelrievqpkphhRahYeTEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQrsahelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingKRkrsqpqhftyhpv/ssvplewplssqsgsyelrievqpkphhRahYeTEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQrsahelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingKRkrsqpqhftyhpv >1p8k_Z:Homing_endonucleases; title=THE STRUCTURE AND DNA RECOGNITION OF A BIFUNCTIONAL HOMING ENDONUCLEASE AND GROUP I INTRON SPLICING FACTOR organism=Emericella nidulans DNA sequence DG(A399):DC(D530) DC(A400):DG(D529) DG(A401):DC(D528) DC(A402):DG(D527) DG(A403):DC(D526) DC(A404):DG(D525) DT(A405):DA(D524) DG(A406):DC(D523) DA(A407):DT(D522) DG(A408):DC(D521) DG(A409):DC(D520) DA(A410):DT(D519) DG(A411):DC(D518) DG(A412):DC(D517) DT(A413):DA(C516) DT(A414):DA(C515) DT(A415):DA(C514) DC(A416):DG(C513) DT(B417):DA(C512) DC(B418):DG(C511) DT(B419):DA(C510) DG(B420):DC(C509) DT(B421):DA(C508) DA(B422):DT(C507) DA(B423):DT(C506) DA(B424):DT(C505) DG(B425):DC(C504) DC(B426):DG(C503) DG(B427):DC(C502) DC(B428):DG(C501) chainZ ( 18) TYR18 0 0 0 0 0 0 0 0 0 0 0 2 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER20 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR22 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS24 0 0 0 0 0 0 6 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) TYR27 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) THR29 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 16 17 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ILE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) MET66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG70 0 0 0 0 0 0 0 0 0 1 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG72 0 0 0 0 0 0 0 0 5 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) CYS150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (152) SER152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (154) TYR154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 17 4 0 0 0 0 0 0 0 (156) LEU156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 7 1 0 0 0 0 (162) TYR162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 (164) ILE164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (166) SER166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (168) ASP168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 2 0 0 0 0 0 0 0 0 0 (170) ALA170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (192) TYR192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (198) CYS198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (200) LYS200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 4 1 0 0 0 0 0 0 0 0 0 (202) LYS202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 (204) THR204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (243) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence gsdltyaylvglfegdgYfSiTkKgkYlTyelgiElsikdvqliykikkilgigivsfRkRneIeMvalRiRdknhlksfilpifekypmfsnkqydylrfrnallsgiisledlpdytrsdeplnsiesiintsyfsawlvgfieaegCfSvYkLnkdddYlIaSfDiAqrdgdilisairkylsfttkvYldktnCsKlKvTsvrsveniikflqnapvkllgnkklqyllwlkqlrkisRysekikipsny >1pa6_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGAGG organism=STERKIELLA NOVA DNA sequence DG(D11) DA(D10) DG(D9) DT(D8) DG(D1) DG(D2) DG(D3) DG(D4) DT(D5):DT(D8) DT(D6) DT(D7) chainB ( 36) LYS44 0 0 1 0 0 0 0 0 0 1 0 ( 37) GLU45 0 0 11 0 0 0 0 0 0 4 0 ( 40) PRO48 0 0 1 0 0 0 0 0 0 0 0 ( 41) HIS49 0 0 13 0 0 0 0 0 0 0 0 ( 43) LEU51 0 0 3 0 0 0 0 0 0 0 0 ( 94) SER102 0 1 0 0 0 0 0 0 0 0 0 ( 98) PHE106 0 0 12 0 0 0 0 0 0 0 0 (101) TYR109 0 2 0 0 0 0 0 0 0 0 0 (126) TYR134 0 0 0 0 0 0 0 51 2 0 0 (132) ARG140 0 24 0 0 0 0 0 0 0 0 0 (137) LYS145 0 2 0 0 0 0 0 0 0 0 0 prot.sequence qqqsafkqlytelfnnegdfskvssnlkkplkcyvKEsyPHfLvtdgyffvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnSaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >1par_ABCD:Ribbon-helix-helix; title=DNA RECOGNITION BY BETA-SHEETS IN THE ARC REPRESSOR-OPERATOR CRYSTAL STRUCTURE organism=ENTEROBACTERIA PHAGE P22 DNA sequence DA(E2):DT(F22) DT(E3):DA(F21) DA(E4):DT(F20) DG(E5):DC(F19) DT(E6):DA(F18) DA(E7):DT(F17) DG(E8):DC(F16) DA(E9):DT(F15) DG(E10):DC(F14) DT(E11):DA(F13) DG(E12):DC(F12) DC(E13):DG(F11) DT(E14):DA(F10) DT(E15):DA(F9) DC(E16):DG(F8) DT(E17):DA(F7) DA(E18):DT(F6) DT(E19):DA(F5) DC(E20):DG(F4) DA(E21):DT(F3) DT(E22):DA(F2) chainA ( 4) MET4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) GLN9 0 0 0 3 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASN11 0 0 0 0 1 9 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ARG13 0 0 0 0 0 5 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 4) MET4 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) GLN9 0 0 0 0 13 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASN11 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ARG13 0 8 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 4) MET4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 ( 5) SER5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 ( 9) GLN9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 3 0 0 0 ( 11) ASN11 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 10 0 0 0 0 0 ( 13) ARG13 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 4 0 0 0 0 0 chainD ( 4) MET4 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 ( 5) SER5 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 9) GLN9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 6 0 0 0 0 ( 11) ASN11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 ( 13) ARG13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 10 0 prot.sequence mkgMskmpQfNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegrig/mkgMskmpQfNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegriga/mkgMSkmpQfNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegr/mkgMSkmpQfNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegriga >1par_B:Ribbon-helix-helix; title=DNA RECOGNITION BY BETA-SHEETS IN THE ARC REPRESSOR-OPERATOR CRYSTAL STRUCTURE organism=ENTEROBACTERIA PHAGE P22 DNA sequence DA(F2):DT(E22) DT(F3):DA(E21) DG(F4):DC(E20) DA(F5):DT(E19) DT(F6):DA(E18) DA(F7):DT(E17) DG(F8):DC(E16) DA(F9):DT(E15) DA(F10):DT(E14) DG(F11):DC(E13) DC(F12):DG(E12) DA(F13):DT(E11) DC(F14):DG(E10) DT(F15):DA(E9) DC(F16):DG(E8) DT(F17):DA(E7) DA(F18):DT(E6) DC(F19):DG(E5) DT(F20):DA(E4) DA(F21):DT(E3) DT(F22):DA(E2) chainB ( 4) MET4 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 9) GLN9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 13 0 0 0 0 ( 11) ASN11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 ( 13) ARG13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 8 0 prot.sequence mkgMskmpQfNlRwprevldlvrkvaeengrsvnseiyqrvmesfkkegriga >1pdn_C:Homeodomain-like; title=CRYSTAL STRUCTURE OF A PAIRED DOMAIN-DNA COMPLEX AT 2.5 ANGSTROMS RESOLUTION REVEALS STRUCTURAL BASIS FOR PAX DEVELOPMENTAL MUTATIONS organism=Drosophila melanogaster DNA sequence DG(B18):DC(A15) DT(B19):DA(A14) DC(B20):DG(A13) DA(B21):DT(A12) DA(B22):DT(A11) DC(B23):DG(A10) DC(B24):DG(A9) DG(B25):DC(A8) DT(B26):DA(A7) DG(B27):DC(A6) DA(B28):DT(A5) DC(B29):DG(A4) DG(B30):DC(A3) chainC ( 13) ASN14 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 45) SER46 0 0 0 0 0 0 0 0 4 1 0 0 0 ( 46) HIS47 0 0 0 0 0 0 0 0 0 0 5 9 17 ( 48) CYS49 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 50) SER51 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 51) LYS52 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 67) ILE68 0 0 0 1 3 1 0 0 0 0 0 0 0 ( 70) SER71 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qgrvnqlggvfiNgrplpnnirlkivemaadgirpcvisrqlrvSHgCvSKilnryqetgsirpgvIggSkpriatpeienrieeykrsspgmfsweirekliregvcdrstapsvsaisrlv >1per_L:lambda_repressor-like_DNA-binding_domains; title=THE COMPLEX BETWEEN PHAGE 434 REPRESSION DNA-BINDING DOMAIN AND OPERATOR SITE OR3: STRUCTURAL DIFFERENCES BETWEEN CONSENSUS AND NON- CONSENSUS HALF-SITES organism=PHAGE 434 DNA sequence DA(A2):DT(B20) DG(A3):DC(B19) DT(A4):DA(B18) DA(A5):DT(B17) DC(A6):DG(B16) DA(A7):DT(B15) DG(A8):DC(B14) DT(A9):DA(B13) DT(A10):DA(B12) DT(A11):DA(B11) DT(A12):DA(B10) DT(A13):DA(B9) DC(A14):DG(B8) DT(A15):DA(B7) DT(A16):DA(B6) DG(A17):DC(B5) DT(A18):DA(B4) DA(A19):DT(B3) DT(A20):DA(B2) chainL ( 17) GLN17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 27) THR27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 28) GLN28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 0 ( 29) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 1 18 15 6 0 0 ( 30) SER30 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 32) GLU32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 ( 33) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 4 9 1 0 0 0 0 ( 38) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 43) ARG43 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 prot.sequence sissrvkskriqlglnQaelaqkvgtTQQSiEQlengKtkrpRflpelasalgvsvdwllngt >1per_LR:lambda_repressor-like_DNA-binding_domains; title=THE COMPLEX BETWEEN PHAGE 434 REPRESSION DNA-BINDING DOMAIN AND OPERATOR SITE OR3: STRUCTURAL DIFFERENCES BETWEEN CONSENSUS AND NON- CONSENSUS HALF-SITES organism=PHAGE 434 DNA sequence DA(B2):DT(A20) DT(B3):DA(A19) DA(B4):DT(A18) DC(B5):DG(A17) DA(B6):DT(A16) DA(B7):DT(A15) DG(B8):DC(A14) DA(B9):DT(A13) DA(B10):DT(A12) DA(B11):DT(A11) DA(B12):DT(A10) DA(B13):DT(A9) DC(B14):DG(A8) DT(B15):DA(A7) DG(B16):DC(A6) DT(B17):DA(A5) DA(B18):DT(A4) DC(B19):DG(A3) DT(B20):DA(A2) chainL ( 17) GLN17 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) THR27 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLN28 0 14 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN29 0 0 6 15 18 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER30 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) GLU32 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) GLN33 0 0 0 0 1 9 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS38 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG43 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 chainR ( 17) GLN17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 27) THR27 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 28) GLN28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 14 0 0 ( 29) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 16 15 4 0 0 0 ( 30) SER30 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 32) GLU32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 prot.sequence sissrvkskriqlglnQaelaqkvgtTQQSiEQlengKtkrpRflpelasalgvsvdwllngt/sissrvkskriqlglnQaelaqkvgtTQQSiEqlengktkrprflpelasalgvsvdwllngt >1ph1_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGGGT organism=STERKIELLA NOVA DNA sequence DG(D12) DG(D11) DG(D10) DG(D9) DG(D1) DG(D2) DG(D3) DG(D4) DT(D5) DT(D6):DG(D9) DT(D7) DT(D8) chainB ( 37) LYS44 0 0 1 0 0 0 0 0 0 0 2 0 ( 38) GLU45 0 0 11 0 0 0 0 0 0 0 4 0 ( 41) PRO48 0 0 1 0 0 0 0 0 0 0 0 0 ( 42) HIS49 0 0 12 0 0 0 0 0 0 0 0 0 ( 44) LEU51 0 0 3 0 0 0 0 0 0 0 0 0 ( 51) PHE58 0 0 1 0 0 0 0 0 0 0 0 0 ( 99) PHE106 0 0 11 0 0 0 0 0 0 0 0 0 (102) TYR109 0 4 0 0 0 0 0 0 0 0 0 0 (127) TYR134 0 0 0 0 0 0 0 0 34 3 1 0 (133) ARG140 0 35 0 0 0 0 0 0 0 0 0 0 (138) LYS145 0 6 0 0 0 0 0 0 0 0 0 0 prot.sequence pqqqsafkqlytelfnnegdfskvssnlkkplkcyvKEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >1ph2_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTG organism=STERKIELLA NOVA DNA sequence DT(D8) DT(D7) DT(D6) DT(D5) DG(D4) DG(D3) DG(D1) DG(D2):DG(D3) chainB ( 37) GLU45 8 0 0 0 0 0 0 0 ( 41) HIS49 7 0 0 0 0 0 0 0 ( 43) LEU51 3 0 0 0 0 0 0 0 ( 50) PHE58 1 0 0 0 0 0 0 0 ( 98) PHE106 21 0 0 0 0 0 0 0 (126) TYR134 0 0 0 3 38 0 0 0 prot.sequence qqqsafkqlytelfnnegdfskvssnlkkplkcyvkEsypHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvNlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >1ph3_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGTG organism=STERKIELLA NOVA DNA sequence DT(D11) DG(D10) DG(D9) DT(D8) DT(D7) DT(D6) DT(D5) DG(D4) DG(D3) DG(D1) DG(D2):DG(D3) chainB ( 37) GLU45 0 0 13 0 0 4 0 0 0 0 0 ( 40) PRO48 0 0 1 0 0 0 0 0 0 0 0 ( 41) HIS49 0 0 16 0 0 0 0 0 0 0 0 ( 43) LEU51 0 0 3 0 0 0 0 0 0 0 0 ( 50) PHE58 0 0 1 0 0 0 0 0 0 0 0 ( 98) PHE106 0 0 10 0 0 0 0 0 0 0 0 (101) TYR109 0 6 0 0 0 0 0 0 0 0 0 (126) TYR134 0 0 0 0 0 0 3 48 0 0 0 (132) ARG140 0 37 0 0 0 0 0 0 0 0 0 (137) LYS145 0 6 0 0 0 0 0 0 0 0 0 prot.sequence qqqsafkqlytelfnnegdfskvssnlkkplkcyvkEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >1ph4_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGCG organism=STERKIELLA NOVA DNA sequence DC(D11) DG(D10) DG(D9) DT(D8) DT(D7) DT(D6) DT(D5) DG(D4) DG(D3) DG(D1) DG(D2):DG(D3) chainB ( 36) LYS44 0 0 1 0 0 1 0 0 0 0 0 ( 37) GLU45 0 0 13 0 0 4 0 0 0 0 0 ( 40) PRO48 0 0 1 0 0 0 0 0 0 0 0 ( 41) HIS49 0 0 17 0 0 0 0 0 0 0 0 ( 43) LEU51 0 0 3 0 0 0 0 0 0 0 0 ( 50) PHE58 0 0 1 0 0 0 0 0 0 0 0 ( 98) PHE106 0 0 13 0 0 0 0 0 0 0 0 (101) TYR109 0 5 0 0 0 0 0 0 0 0 0 (126) TYR134 0 0 0 0 0 0 3 48 0 0 0 (132) ARG140 0 36 0 0 0 0 0 0 0 0 0 (137) LYS145 0 7 0 0 0 0 0 0 0 0 0 prot.sequence qqqsafkqlytelfnnegdfskvssnlkkplkcyvKEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >1ph5_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTG(3DR)GG organism=STERKIELLA NOVA DNA sequence DG(D2) DG(D3) DG(D4) DT(D5) DT(D6):DG(D12) DT(D7) DT(D8) DG(D9) DG(D11) chainB ( 36) LYS44 0 0 0 0 0 0 0 1 0 ( 37) GLU45 0 0 0 0 0 3 0 11 0 ( 40) PRO48 0 0 0 0 0 0 0 1 0 ( 41) HIS49 0 0 0 0 0 0 0 10 0 ( 43) LEU51 0 0 0 0 0 0 0 3 0 ( 50) PHE58 0 0 0 0 0 0 0 1 0 ( 98) PHE106 0 0 0 0 0 0 0 16 0 (126) TYR134 0 0 0 40 3 0 0 0 0 prot.sequence qqqsafkqlytelfnnegdfskvssnlkkplkcyvKEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsyanlearlivhsfkpnlqerlnptrYpvnlfrddefkttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >1ph6_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGTGG organism=STERKIELLA NOVA DNA sequence DG(D11) DT(D10) DG(D9) DT(D8) DT(D7) DT(D6) DT(D5) DG(D4) DG(D2) DG(D3):DG(D4) chainB ( 38) GLU45 0 0 12 0 2 0 0 0 0 0 ( 41) PRO48 0 0 1 0 0 0 0 0 0 0 ( 42) HIS49 0 0 13 0 0 0 0 0 0 0 ( 44) LEU51 0 0 3 0 0 0 0 0 0 0 ( 51) PHE58 0 0 1 0 0 0 0 0 0 0 ( 99) PHE106 0 0 16 0 0 0 0 0 0 0 (102) TYR109 0 3 0 0 0 0 0 0 0 0 (127) TYR134 0 0 0 0 0 3 33 0 0 0 (133) ARG140 0 28 0 0 0 0 0 0 0 0 (138) LYS145 0 5 0 0 0 0 0 0 0 0 prot.sequence pqqqsafkqlytelfnnegdfskvssnlkkplkcyvkEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >1ph7_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGIGG organism=STERKIELLA NOVA DNA sequence DG(D2) DG(D3) DG(D4) DT(D5) DT(D6) DT(D7) DT(D8) DG(D9) DI(D10) DG(D11) DG(D12) chainB ( 36) LYS44 0 0 0 0 0 0 0 1 0 0 0 ( 37) GLU45 0 0 0 0 0 3 0 12 0 0 0 ( 40) PRO48 0 0 0 0 0 0 0 1 0 0 0 ( 41) HIS49 0 0 0 0 0 0 0 13 0 0 0 ( 43) LEU51 0 0 0 0 0 0 0 3 0 0 0 ( 50) PHE58 0 0 0 0 0 0 0 1 0 0 0 ( 98) PHE106 0 0 0 0 0 0 0 14 0 0 0 (101) TYR109 0 0 0 0 0 0 0 0 5 0 0 (126) TYR134 0 0 0 43 3 0 0 0 0 0 0 (132) ARG140 0 0 0 0 0 0 0 0 34 0 0 (137) LYS145 0 0 0 0 0 0 0 0 5 0 0 prot.sequence qqqsafkqlytelfnnegdfskvssnlkkplkcyvKEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >1ph8_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGCGG organism=STERKIELLA NOVA DNA sequence DG(D2) DG(D3) DG(D4) DT(D5) DT(D6) DT(D7) DT(D8) DG(D9) DC(D10) DG(D11) DG(D12) chainB ( 36) LYS44 0 0 0 0 0 0 0 1 0 0 0 ( 37) GLU45 0 0 0 0 0 3 0 13 0 0 0 ( 40) PRO48 0 0 0 0 0 0 0 1 0 0 0 ( 41) HIS49 0 0 0 0 0 0 0 11 0 0 0 ( 43) LEU51 0 0 0 0 0 0 0 3 0 0 0 ( 50) PHE58 0 0 0 0 0 0 0 1 0 0 0 ( 98) PHE106 0 0 0 0 0 0 0 14 0 0 0 (101) TYR109 0 0 0 0 0 0 0 0 3 0 0 (126) TYR134 0 0 0 40 3 0 0 0 0 0 0 (132) ARG140 0 0 0 0 0 0 0 0 29 0 0 (137) LYS145 0 0 0 0 0 0 0 0 5 0 0 prot.sequence qqqsafkqlytelfnnegdfskvssnlkkplkcyvKEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >1ph9_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGAGG organism=STERKIELLA NOVA DNA sequence DG(D2) DG(D3) DG(D4) DT(D5) DT(D6) DT(D7) DT(D8) DG(D9) DA(D10) DG(D11) DG(D12) chainB ( 36) LYS44 0 0 0 0 0 0 0 1 0 0 0 ( 37) GLU45 0 0 0 0 0 1 0 11 0 0 0 ( 40) PRO48 0 0 0 0 0 0 0 1 0 0 0 ( 41) HIS49 0 0 0 0 0 0 0 10 0 0 0 ( 43) LEU51 0 0 0 0 0 0 0 3 0 0 0 ( 50) PHE58 0 0 0 0 0 0 0 1 0 0 0 ( 94) SER102 0 0 0 0 0 0 0 0 2 0 0 ( 98) PHE106 0 0 0 0 0 0 0 8 0 0 0 (101) TYR109 0 0 0 0 0 0 0 0 2 0 0 (126) TYR134 0 0 0 42 3 0 0 0 0 0 0 (132) ARG140 0 0 0 0 0 0 0 0 23 0 0 (137) LYS145 0 0 0 0 0 0 0 0 4 0 0 prot.sequence qqqsafkqlytelfnnegdfskvssnlkkplkcyvKEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnSaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >1phj_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GG(3DR)GTTTTGGGG organism=STERKIELLA NOVA DNA sequence DG(D11) DG(D10) DG(D9) DT(D8) DT(D7) DT(D6) DT(D5) DG(D4) DG(D1) DG(D2):DG(D4) chainB ( 35) LYS44 0 0 1 0 0 0 0 0 0 0 ( 36) GLU45 0 0 13 0 3 0 0 0 0 0 ( 39) PRO48 0 0 1 0 0 0 0 0 0 0 ( 40) HIS49 0 0 9 0 0 0 0 0 0 0 ( 42) LEU51 0 0 3 0 0 0 0 0 0 0 ( 49) PHE58 0 0 1 0 0 0 0 0 0 0 ( 97) PHE106 0 0 7 0 0 0 0 0 0 0 (100) TYR109 0 4 0 0 0 0 0 0 0 0 (125) TYR134 0 0 0 0 1 3 30 0 0 0 (131) ARG140 0 34 0 0 0 0 0 0 0 0 (136) LYS145 0 6 0 0 0 0 0 0 0 0 prot.sequence qqsafkqlytelfnnegdfskvssnlkkplkcyvKEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >1pji_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF WILD TYPE LACTOCOCCUS LACTIS FPG COMPLEXED TO A 1,3 PROPANEDIOL CONTAINING DNA organism=Lactococcus lactis subsp. cremoris DNA sequence DC(E16):DG(D14) DG(E17):DC(D13) DA(E18):DT(D12) DG(E19):DC(D11) DA(E20):DT(D10) DA(E21):DT(D9) DA(E22):DT(D8) DC(E23):PDI(D7) DA(E24):DT(D6) DA(E25):DT(D5) DA(E26):DT(D4) DG(E27):DC(D3) DA(E28):DT(D2) chainA ( 2) GLU2 0 0 0 0 0 0 0 6 0 0 0 0 0 ( 74) ARG74 0 0 0 0 0 4 16 0 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 24 5 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 2 15 34 0 0 0 0 (111) PHE111 0 0 0 0 0 0 76 10 0 0 0 0 0 (171) ASN171 0 0 0 0 0 0 0 5 0 0 0 0 0 (172) ILE172 0 0 0 0 0 0 0 3 0 0 0 0 0 (234) TYR238 0 0 0 0 0 0 0 3 0 0 0 0 0 (256) ARG260 0 0 0 0 0 1 10 2 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggsssalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >1pjj_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=COMPLEX BETWEEN THE LACTOCOCCUS LACTIS FPG AND AN ABASIC SITE CONTAINING DNA. organism=Lactococcus lactis DNA sequence DT(D2):DA(E28) DC(D3):DG(E27) DT(D4):DA(E26) DT(D5):DA(E25) DT(D6):DA(E24) 3DR(D7):DC(E23) DT(D8):DA(E22) DT(D9):DA(E21) DT(D10):DA(E20) DC(D11):DG(E19) DT(D12):DA(E18) DC(D13):DG(E17) DG(D14):DC(E16) chainA ( 74) ARG74 0 0 0 0 0 0 7 4 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 13 0 0 0 0 0 0 (109) ARG109 0 0 0 0 76 15 0 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 10 37 0 0 0 0 0 0 (260) ARG260 0 0 0 0 0 0 5 1 0 0 0 0 0 prot.sequence gelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMegkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssirtysalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >1pm5_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF WILD TYPE LACTOCOCCUS LACTIS FPG COMPLEXED TO A TETRAHYDROFURAN CONTAINING DNA organism=Lactococcus lactis subsp. cremoris DNA sequence DT(D2):DA(E28) DC(D3):DG(E27) DT(D4):DA(E26) DT(D5):DA(E25) DT(D6):DA(E24) 3DR(D7):DC(E23) DT(D8):DA(E22) DT(D9):DA(E21) DT(D10):DA(E20) DC(D11):DG(E19) DT(D12):DA(E18) DC(D13):DG(E17) DG(D14):DC(E16) chainA ( 74) ARG74 0 0 0 0 0 0 7 4 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 13 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 2 0 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 74 15 1 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 10 36 0 0 0 0 0 0 (260) ARG260 0 0 0 0 0 0 5 1 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssirtysalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >1pnr_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=PURINE REPRESSOR-HYPOXANTHINE-PURF-OPERATOR COMPLEX organism=ESCHERICHIA COLI DNA sequence DA(B699) DA(B700) DC(B701) DG(B702) DA(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DT(B712) DC(B713) DG(B714) DT(B715) chainA ( 12) SER14 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 2 6 3 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 23 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1pp7_U:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE T. VAGINALIS INITIATOR BINDING PROTEIN BOUND TO THE FERREDOXIN INR organism=Trichomonas vaginalis DNA sequence DG(E26):DC(F15) DT(E27):DA(F14) DT(E28):DA(F13) DA(E29):DT(F12) DC(E30):DG(F11) DT(E31):DA(F10) DT(E32):DA(F9) DC(E33):DG(F8) DA(E34):DT(F7) DC(E35):DG(F6) DT(E36):DA(F5) DT(E37):DA(F4) chainU ( 21) LYS25 0 0 6 1 0 0 0 0 0 0 0 0 ( 24) ARG28 3 9 4 0 0 0 0 0 0 0 0 0 ( 77) ASN81 0 0 0 0 0 0 3 7 8 4 0 0 ( 78) THR82 0 0 0 0 0 0 3 0 0 0 0 0 ( 80) ASN84 0 0 0 0 0 0 0 0 0 0 2 0 ( 81) VAL85 0 0 0 0 0 1 3 0 1 0 0 0 ( 82) ASN86 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence dleasftsrlppeivaalkrKssRdpnsrfprklhmlltylasnpqleeeiglswisdtefkmkkknvalvmgiklNTlNVNlrdlafeqlqhdkggwtqwkrsgftrnsvfed >1pp8_F:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE T. VAGINALIS IBP39 INITIATOR BINDING DOMAIN (IBD) BOUND TO THE ALPHA-SCS INR ELEMENT organism=Trichomonas vaginalis DNA sequence DA(J4):DT(K37) DT(J5):DA(K36) DG(J6):DC(K35) DT(J7):DA(K34) DG(J8):DC(K33) DA(J9):DT(K32) DA(J10):DT(K31) DG(J11):DC(K30) DT(J12):DA(K29) DG(J13):DC(K28) DA(J14):DT(K27) DC(R3):DG(K26) DA(R4):DT(Y37) DT(R5):DA(Y36) DG(R6):DC(Y35) DT(R7):DA(Y34) DG(R8):DC(Y33) DA(R9):DT(Y32) DA(R10):DT(Y31) DG(R11):DC(Y30) DT(R12):DA(Y29) DG(R13):DC(Y28) DA(R14):DT(Y27) DC(G3):DG(Y26) DA(G4):DT(E37) DT(G5):DA(E36) DG(G6):DC(E35) DT(G7):DA(E34) DG(G8):DC(E33) DA(G9):DT(E32) DA(G10):DT(E31) DG(G11):DC(E30) DT(G12):DA(E29) DG(G13):DC(E28) DA(G14):DT(E27) DC(T3):DG(E26) DA(T4):DT(I37) DT(T5):DA(I36) DG(T6):DC(I35) DT(T7):DA(I34) DG(T8):DC(I33) DA(T9):DT(I32) DA(T10):DT(I31) DG(T11):DC(I30) DT(T12):DA(I29) DG(T13):DC(I28) DA(T14):DT(I27) chainF ( 24) LYS25 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) SER26 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG28 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ASN81 0 0 4 8 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) THR82 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) VAL85 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dsndleasftsrlppeivaalkrKSsRdpnsrfprklhmlltylasnpqleeeiglswisdtefkmkkknvalvmgiklNTlnVnlrdlafeqlqhdkggwtqwkrsgftrns >1pp8_FMU:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE T. VAGINALIS IBP39 INITIATOR BINDING DOMAIN (IBD) BOUND TO THE ALPHA-SCS INR ELEMENT organism=Trichomonas vaginalis DNA sequence DA(J4):DT(K37) DT(J5):DA(K36) DG(J6):DC(K35) DT(J7):DA(K34) DG(J8):DC(K33) DA(J9):DT(K32) DA(J10):DT(K31) DG(J11):DC(K30) DT(J12):DA(K29) DG(J13):DC(K28) DA(J14):DT(K27) DC(R3):DG(K26) DA(R4):DT(Y37) DT(R5):DA(Y36) DG(R6):DC(Y35) DT(R7):DA(Y34) DG(R8):DC(Y33) DA(R9):DT(Y32) DA(R10):DT(Y31) DG(R11):DC(Y30) DT(R12):DA(Y29) DG(R13):DC(Y28) DA(R14):DT(Y27) DC(G3):DG(Y26) DA(G4):DT(E37) DT(G5):DA(E36) DG(G6):DC(E35) DT(G7):DA(E34) DG(G8):DC(E33) DA(G9):DT(E32) DA(G10):DT(E31) DG(G11):DC(E30) DT(G12):DA(E29) DG(G13):DC(E28) DA(G14):DT(E27) DC(T3):DG(E26) DA(T4):DT(I37) DT(T5):DA(I36) DG(T6):DC(I35) DT(T7):DA(I34) DG(T8):DC(I33) DA(T9):DT(I32) DA(T10):DT(I31) DG(T11):DC(I30) DT(T12):DA(I29) DG(T13):DC(I28) DA(T14):DT(I27) chainU ( 24) LYS25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) SER26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 ( 80) ASN81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) THR82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) VAL85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ASN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 24) LYS25 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) SER26 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG28 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ASN81 0 0 4 8 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) THR82 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) VAL85 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 25) LYS25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) SER26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ASN81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) THR82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) VAL85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dsndleasftsrlppeivaalkrKSsRdpnsrfprklhmlltylasnpqleeeiglswisdtefkmkkknvalvmgiklNTlnVnlrdlafeqlqhdkggwtqwkrsgftrns/mdsndleasftsrlppeivaalkrKSsRdpnsrfprklhmlltylasnpqleeeiglswisdtefkmkkknvalvmgiklNTlNVnlrdlafeqlqhdkggwtqwkrsgftrnsvfed/dsndleasftsrlppeivaalkrKSsRdpnsrfprklhmlltylasnpqleeeiglswisdtefkmkkknvalvmgiklNTlnVNlrdlafeqlqhdkggwtqwkrsgftr >1pt3_AB: title=CRYSTAL STRUCTURES OF NUCLEASE-COLE7 COMPLEXED WITH OCTAMER DNA organism=ESCHERICHIA COLI STR. K12 SUBSTR. DNA sequence DG(C1):DC(D16) DC(C2):DG(D15) DG(C3):DC(D14) DA(C4):DT(D13) DT(C5):DA(D12) DC(C6):DG(D11) DG(C7):DC(D10) DC(C8):DG(D9) DG(G1):DC(H16) DC(G2):DG(H15) DG(G3):DC(H14) DA(G4):DT(H13) DT(G5):DA(H12) DC(G6):DG(H11) DG(G7):DC(H10) DC(G8):DG(H9) DG(F9):DC(E8) DC(F10):DG(E7) DG(F11):DC(E6) DA(F12):DT(E5) DT(F13):DA(E4) DC(F14):DG(E3) DG(F15):DC(E2) DC(F16):DG(E1) chainA ( 45) ASP493 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG496 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS497 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG538 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 45) ASP493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 ( 46) ASP494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 48) ARG496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 49) LYS497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 ( 90) ARG538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 prot.sequence kpgkatgkgkpvnnkwlnnagkdlgspvpdrianklrdkefksfDdfRKkfweevskdpelskqfsrnnndrmkvgkapktrtqdvsgkRtsfelhhekpisqnggvydmdnisvvtpkrhidihrgk/kpgkatgkgkpvnnkwlnnagkdlgspvpdrianklrdkefksfDDfRKkfweevskdpelskqfsrnnndrmkvgkapktrtqdvsgkRtsfelhhekpisqnggvydmdnisvvtpkrhidihrgk >1pt3_B:His-Me_finger_endonucleases; title=CRYSTAL STRUCTURES OF NUCLEASE-COLE7 COMPLEXED WITH OCTAMER DNA organism=ESCHERICHIA COLI STR. K12 SUBSTR. DNA sequence DG(C1):DC(D16) DC(C2):DG(D15) DG(C3):DC(D14) DA(C4):DT(D13) DT(C5):DA(D12) DC(C6):DG(D11) DG(C7):DC(D10) DC(C8):DG(D9) DG(G1):DC(H16) DC(G2):DG(H15) DG(G3):DC(H14) DA(G4):DT(H13) DT(G5):DA(H12) DC(G6):DG(H11) DG(G7):DC(H10) DC(G8):DG(H9) DG(F9):DC(E8) DC(F10):DG(E7) DG(F11):DC(E6) DA(F12):DT(E5) DT(F13):DA(E4) DC(F14):DG(E3) DG(F15):DC(E2) DC(F16):DG(E1) chainB ( 45) ASP493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 ( 46) ASP494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 48) ARG496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 49) LYS497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 ( 90) ARG538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 prot.sequence kpgkatgkgkpvnnkwlnnagkdlgspvpdrianklrdkefksfDDfRKkfweevskdpelskqfsrnnndrmkvgkapktrtqdvsgkRtsfelhhekpisqnggvydmdnisvvtpkrhidihrgk >1pue_E:"Winged_helix"_DNA-binding_domain; title=PU.1 ETS DOMAIN-DNA COMPLEX organism=Mus musculus DNA sequence DC(B18):DG(A16) DC(B19):DG(A15) DC(B20):DG(A14) DA(B21):DT(A13) DC(B22):DG(A12) DT(B23):DA(A11) DT(B24):DA(A10) DC(B25):DG(A9) DC(B26):DG(A8) DC(B27):DG(A7) DC(B28):DG(A6) DT(B29):DA(A5) DT(B30):DA(A4) DT(B31):DA(A3) DT(B32):DA(A2) chainE ( 58) GLU228 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 ( 59) LYS229 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 ( 62) ARG232 0 0 0 0 0 2 14 15 13 0 0 0 0 0 0 ( 63) ALA233 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 65) ARG235 0 0 0 0 0 0 0 0 9 12 0 0 0 0 0 ( 66) ASN236 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyEKmaRAlRNygktgevkkvkkkltyqfsgev >1puf_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF HOXA9 AND PBX1 HOMEODOMAINS BOUND TO DNA organism=MUS MUSCULUS DNA sequence DA(E22):DT(D20) DG(E23):DC(D19) DC(E24):DG(D18) DG(E25):DC(D17) DT(E26):DA(D16) DC(E27):DG(D15) DG(E28):DC(D14) DT(E29):DA(D13) DA(E30):DT(D12) DA(E31):DT(D11) DA(E32):DT(D10) DT(E33):DA(D9) DC(E34):DG(D8) DA(E35):DT(D7) DT(E36):DA(D6) DA(E37):DT(D5) DG(E38):DC(D4) DA(E39):DT(D3) DG(E40):DC(D2) chainA ( 14) ARG206 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 ( 17) ARG209 0 0 0 0 0 0 0 0 8 11 7 0 0 0 0 0 0 0 0 ( 59) ILE251 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN254 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN255 0 0 0 0 0 0 2 11 8 0 0 0 0 0 0 0 0 0 0 ( 66) MET258 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nnpaanwlharstRkkRcpytkhqtlelekeflfnmyltrdrryevarllnlterqvkIwfQNrrMkmkkinkdrak >1puf_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF HOXA9 AND PBX1 HOMEODOMAINS BOUND TO DNA organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DC(D2):DG(E40) DT(D3):DA(E39) DC(D4):DG(E38) DT(D5):DA(E37) DA(D6):DT(E36) DT(D7):DA(E35) DG(D8):DC(E34) DA(D9):DT(E33) DT(D10):DA(E32) DT(D11):DA(E31) DT(D12):DA(E30) DA(D13):DT(E29) DC(D14):DG(E28) DG(D15):DC(E27) DA(D16):DT(E26) DC(D17):DG(E25) DG(D18):DC(E24) DC(D19):DG(E23) DT(D20):DA(E22) chainA ( 14) ARG206 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 ( 17) ARG209 0 0 0 0 0 0 0 0 7 11 8 0 0 0 0 0 0 0 0 ( 59) ILE251 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 62) GLN254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 ( 63) ASN255 0 0 0 0 0 0 0 0 0 0 8 11 2 0 0 0 0 0 0 ( 66) MET258 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chainB ( 5) ARG237 0 0 0 3 4 7 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN282 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 ( 54) ASN286 0 0 0 0 0 0 6 10 1 0 0 0 0 0 0 0 0 0 0 ( 57) ILE289 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 58) ARG290 0 0 0 0 0 13 11 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nnpaanwlharstRkkRcpytkhqtlelekeflfnmyltrdrryevarllnlterqvkIwfQNrrMkmkkinkdrak/arrkRrnfnkqateilneyfyshlsnpypseeakeelakkcgitvsqvsNwfgNkrIRykknigkfqeeaniy >1puf_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF HOXA9 AND PBX1 HOMEODOMAINS BOUND TO DNA organism=HOMO SAPIENS DNA sequence DC(D2):DG(E40) DT(D3):DA(E39) DC(D4):DG(E38) DT(D5):DA(E37) DA(D6):DT(E36) DT(D7):DA(E35) DG(D8):DC(E34) DA(D9):DT(E33) DT(D10):DA(E32) DT(D11):DA(E31) DT(D12):DA(E30) DA(D13):DT(E29) DC(D14):DG(E28) DG(D15):DC(E27) DA(D16):DT(E26) DC(D17):DG(E25) DG(D18):DC(E24) DC(D19):DG(E23) DT(D20):DA(E22) chainB ( 5) ARG237 0 0 0 3 4 7 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN282 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 ( 54) ASN286 0 0 0 0 0 0 6 10 1 0 0 0 0 0 0 0 0 0 0 ( 57) ILE289 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 58) ARG290 0 0 0 0 0 13 11 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence arrkRrnfnkqateilneyfyshlsnpypseeakeelakkcgitvsqvsNwfgNkrIRykknigkfqeeaniy >1pv4_A:P-loop_containing_nucleoside_triphosphate_hydrolases;Nucleic_acid-binding_proteins;Rho_termination_factor,_N-terminal_domain; title=X-RAY CRYSTAL STRUCTURE OF THE RHO TRANSCRIPTION TERMINATION FACTOR IN COMPLEX WITH SINGLE STRANDED DNA organism=Escherichia coli DNA sequence DC(G3) DC(G4) chainA ( 58) LEU58 0 4 ( 64) PHE64 0 34 ( 66) ARG66 0 14 ( 74) ALA74 0 3 ( 78) ASP78 0 4 ( 80) TYR80 23 0 (102) ARG102 2 0 (108) GLU108 19 0 (109) ARG109 4 0 (110) TYR110 9 13 (112) ALA112 1 0 prot.sequence mnltelkntpvselitlgenmglenlarmrkqdiifailkqhaksgedifgdgvleiLqdgfgFlRsadssylAgpdDiYvspsqirrfnlrtgdtisgkiRppkegERYfAllkvnevnfdkpennkilfenltplhansrlrmgstedltarvldlaspigrgqrglivappkagktmllqniaqsiaynhpdcvlmvlliderpeevtemqrlvkgevvastfdepasrhvqvaemviekakrlvehkkdviilldsitrlarayntvvpavltggvdanalhrpkrffgaarnveeggsltiiatalidtgskmdeviyeefkgtgnmelhlsrkiaekrvfpaidynrsgtrkeellttqeelqkmwilrkiihpmgeidameflinklamtktnddffemmk >1pvi_A:Restriction_endonuclease-like; title=STRUCTURE OF PVUII ENDONUCLEASE WITH COGNATE DNA organism=PROTEUS VULGARIS DNA sequence DG(C3):DC(D14) DA(C4):DT(D13) DC(C5):DG(D12) DC(C6):DG(D11) DA(C7):DT(D10) DG(C8):DC(D9) DC(C9):DG(D8) DT(C10):DA(D7) DG(C11):DC(D6) DG(C12):DC(D5) DT(C13):DA(D4) DC(C14):DG(D3) chainA ( 33) ASP34 0 0 0 0 0 3 6 0 0 0 0 0 ( 80) SER81 0 0 0 2 8 0 0 0 0 0 0 0 ( 83) HIS84 0 0 0 0 24 13 0 0 0 0 0 0 (139) ASN140 0 0 0 12 8 0 0 0 0 0 0 0 (140) ASN141 0 0 0 8 15 0 0 0 0 0 0 0 (142) LYS143 0 0 8 11 0 0 0 0 0 0 0 0 prot.sequence shpdlnkllelwphiqeyqdlalkhgindifqDnggkllqvllitgltvlpgregndavdnagqeyelksinidltkgfSthHhmnpviiakyrqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy >1pvi_AB:Restriction_endonuclease-like; title=STRUCTURE OF PVUII ENDONUCLEASE WITH COGNATE DNA organism=PROTEUS VULGARIS DNA sequence DG(C3):DC(D14) DA(C4):DT(D13) DC(C5):DG(D12) DC(C6):DG(D11) DA(C7):DT(D10) DG(C8):DC(D9) DC(C9):DG(D8) DT(C10):DA(D7) DG(C11):DC(D6) DG(C12):DC(D5) DT(C13):DA(D4) DC(C14):DG(D3) chainA ( 33) ASP34 0 0 0 0 0 3 6 0 0 0 0 0 ( 80) SER81 0 0 0 2 8 0 0 0 0 0 0 0 ( 83) HIS84 0 0 0 0 24 13 0 0 0 0 0 0 (139) ASN140 0 0 0 12 8 0 0 0 0 0 0 0 (140) ASN141 0 0 0 8 15 0 0 0 0 0 0 0 (142) LYS143 0 0 8 11 0 0 0 0 0 0 0 0 chainB ( 33) ASP34 0 0 0 0 0 4 1 0 0 0 0 0 ( 80) SER81 0 0 0 0 0 0 0 6 2 0 0 0 ( 83) HIS84 0 0 0 0 0 0 12 34 0 0 0 0 (139) ASN140 0 0 0 0 0 0 0 10 11 0 0 0 (140) ASN141 0 0 0 0 0 0 0 17 9 1 0 0 (142) LYS143 0 0 0 0 0 0 0 0 9 9 1 0 prot.sequence shpdlnkllelwphiqeyqdlalkhgindifqDnggkllqvllitgltvlpgregndavdnagqeyelksinidltkgfSthHhmnpviiakyrqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy/shpdlnkllelwphiqeyqdlalkhgindifqDnggkllqvllitgltvlpgregndavdnagqeyelksinidltkgfSthHhmnpviiakyrqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy >1pvp_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, ALSHG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 organism=Escherichia phage P1 DNA sequence DC(D19):DG(C16) DA(D20):DT(C15) DT(D21):DA(C14) DT(D22):DA(C13) DA(D23):DT(C12) DT(D24):DA(C11) DA(D25):DT(C10) DT(D26):DA(C9) DA(D27):DT(C8) DG(D28):DC(C7) DA(D29):DT(C6) DG(D30):DC(C5) DT(D31):DA(C4) DT(D32):DA(C3) DA(D33):DT(C2) DT(D34):DA(C1) chainA chainB ( 22) HIS40 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 ( 23) THR41 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS43 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 ( 26) MET44 0 0 0 0 8 7 2 0 0 0 0 0 0 0 0 0 ( 29) SER47 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 68) LYS86 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR87 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN90 0 0 4 8 11 0 0 0 0 0 0 0 0 0 0 0 ( 76) GLN94 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (183) LYS201 0 1 6 5 0 0 0 0 0 0 0 0 0 0 0 0 (223) ARG241 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 (225) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 (226) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 3 (239) SER257 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (241) SER259 0 0 0 0 0 0 0 0 1 6 5 0 0 0 0 0 (244) HIS262 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (264) ARG282 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 (299) ASN317 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tsdevrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdyllylqarglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllraaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcrvrkngvaapsatsqlslsalhgifgathrliygakddsgqrylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled/tsdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllraaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlSlSalHgifgathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirtgamvrlled >1pvq_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 organism=Escherichia phage P1 DNA sequence DA(D1):DT(C34) DT(D2):DA(C33) DA(D3):DT(C32) DA(D4):DT(C31) DC(D5):DG(C30) DT(D6):DA(C29) DC(D7):DG(C28) DT(D8):DA(C27) DA(D9):DT(C26) DT(D10):DA(C25) DA(D11):DT(C24) DT(D12):DA(C23) DA(D13):DT(C22) DG(D14):DC(C21) DC(D15):DG(C20) DA(D18):DT(C19) DC(D19):DG(C16) DA(D20):DT(C15) DT(D21):DA(C14) DT(D22):DA(C13) DA(D23):DT(C12) DT(D24):DA(C11) DA(D25):DT(C10) DT(D26):DA(C9) DA(D27):DT(C8) DG(D28):DC(C7) DA(D29):DT(C6) DG(D30):DC(C5) DT(D31):DA(C4) DT(D32):DA(C3) DA(D33):DT(C2) DT(D34):DA(C1) chainA ( 26) MET44 0 0 0 0 0 0 0 0 0 5 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR87 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN90 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) ARG241 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS244 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER257 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) SER259 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) ARG282 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tsdevrknlmdmfrdrqafsehtwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavkTiqQhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllrlaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlSnSalggifgathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled >1pvq_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 organism=Escherichia phage P1 DNA sequence DA(C1):DT(D34) DT(C2):DA(D33) DA(C3):DT(D32) DA(C4):DT(D31) DC(C5):DG(D30) DT(C6):DA(D29) DC(C7):DG(D28) DT(C8):DA(D27) DA(C9):DT(D26) DT(C10):DA(D25) DA(C11):DT(D24) DT(C12):DA(D23) DA(C13):DT(D22) DA(C14):DT(D21) DT(C15):DA(D20) DG(C16):DC(D19) chainA chainB ( 22) HIS40 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 ( 23) THR41 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 25) LYS43 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 ( 26) MET44 0 0 0 0 0 0 0 0 0 1 6 7 0 0 0 0 ( 29) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 68) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 ( 69) THR87 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 72) GLN90 0 0 0 0 0 0 0 0 0 0 0 14 9 2 0 0 ( 76) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (183) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 6 7 2 0 (223) ARG241 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (225) ARG243 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS244 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER257 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (241) SER259 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 (264) ARG282 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 (302) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence tsdevrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdyllylqarglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllrlaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcrvrkngvaapsatsqlsnsalggifgathrliygakddsgqrylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled/tsdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllrlaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlSnSalggifgathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnIvmnyirntgamvrlled >1pvr_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE LOXP (WILDTYPE) RECOGNITION SITE organism=Enterobacteria phage P1 DNA sequence DA(D1):DT(C34) DT(D2):DA(C33) DA(D3):DT(C32) DA(D4):DT(C31) DC(D5):DG(C30) DT(D6):DA(C29) DT(D7):DA(C28) DC(D8):DG(C27) DG(D9):DC(C26) DT(D10):DA(C25) DA(D11):DT(C24) DT(D12):DA(C23) DA(D13):DT(C22) DG(D14):DC(C21) DC(D15):DG(C20) DA(D16):DT(C19) DT(D17):DA(C18) DC(D19):DG(C16) DA(D20):DT(C15) DT(D21):DA(C14) DT(D22):DA(C13) DA(D23):DT(C12) DT(D24):DA(C11) DA(D25):DT(C10) DC(D26):DG(C9) DG(D27):DC(C8) DA(D28):DT(C7) DA(D29):DT(C6) DG(D30):DC(C5) DT(D31):DA(C4) DT(D32):DA(C3) DA(D33):DT(C2) DT(D34):DA(C1) chainA ( 27) MET44 0 0 0 0 0 0 0 0 0 5 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR87 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN90 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG241 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) LYS244 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) SER257 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) SER259 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ARG282 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence atsdevrknlmdmfrdrqafsehtwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavkTiqQhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllrlaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlSnSalggifgathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled >1pvr_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE LOXP (WILDTYPE) RECOGNITION SITE organism=Enterobacteria phage P1 DNA sequence DA(C1):DT(D34) DT(C2):DA(D33) DA(C3):DT(D32) DA(C4):DT(D31) DC(C5):DG(D30) DT(C6):DA(D29) DT(C7):DA(D28) DC(C8):DG(D27) DG(C9):DC(D26) DT(C10):DA(D25) DA(C11):DT(D24) DT(C12):DA(D23) DA(C13):DT(D22) DA(C14):DT(D21) DT(C15):DA(D20) DG(C16):DC(D19) chainA chainB ( 22) HIS40 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 ( 23) THR41 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 25) LYS43 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 ( 26) MET44 0 0 0 0 0 0 0 0 0 2 3 8 0 0 0 0 ( 29) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 68) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 8 8 1 0 ( 69) THR87 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 72) GLN90 0 0 0 0 0 0 0 0 0 0 0 13 8 2 0 0 ( 76) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (183) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 6 7 2 0 (223) ARG241 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (225) ARG243 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS244 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER257 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 (241) SER259 0 0 0 0 0 0 6 7 1 0 0 0 0 0 0 0 (264) ARG282 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 (302) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence atsdevrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdyllylqarglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllrlaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcrvrkngvaapsatsqlsnsalggifgathrliygakddsgqrylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled/tsdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllrlaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlSnSalggifgathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnIvmnyirnltgamvrlled >1pyi_A:Zn2/Cys6_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A PPR1-DNA COMPLEX: DNA RECOGNITION BY PROTEINS CONTAINING A ZN2CYS6 BINUCLEAR CLUSTER organism=Saccharomyces cerevisiae DNA sequence DT(D1):DA(E28) DC(D2):DG(E27) DG(D3):DC(E26) DG(D4):DC(E25) DC(D5):DG(E24) DA(D6):DT(E23) DA(D7):DT(E22) DT(D8):DA(E21) DT(D9):DA(E20) DG(D10):DC(E19) DC(D11):DG(E18) DC(D12):DG(E17) DG(D13):DC(E16) DA(D14):DT(E15) chainA ( 11) LYS40 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) LYS41 0 12 13 18 0 0 0 0 0 0 0 0 0 0 ( 13) ILE42 1 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence srtackrcrlKKIkcdqefpsckrcaklevpcvsldpatgkdvprsyvffledrlavmmrvlkeygvdptkirgnipatsddepfdlk >1pyi_AB:Zn2/Cys6_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A PPR1-DNA COMPLEX: DNA RECOGNITION BY PROTEINS CONTAINING A ZN2CYS6 BINUCLEAR CLUSTER organism=Saccharomyces cerevisiae DNA sequence DT(E15):DA(D14) DC(E16):DG(D13) DG(E17):DC(D12) DG(E18):DC(D11) DC(E19):DG(D10) DA(E20):DT(D9) DA(E21):DT(D8) DT(E22):DA(D7) DT(E23):DA(D6) DG(E24):DC(D5) DC(E25):DG(D4) DC(E26):DG(D3) DG(E27):DC(D2) DA(E28):DT(D1) chainA ( 11) LYS40 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 12) LYS41 0 0 0 0 0 0 0 0 0 0 18 13 12 0 ( 13) ILE42 0 0 0 0 0 0 0 0 0 0 0 0 1 1 chainB ( 11) LYS40 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) LYS41 0 6 4 10 0 0 0 0 0 0 0 0 0 0 ( 13) ILE42 2 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence srtackrcrlKKIkcdqefpsckrcaklevpcvsldpatgkdvprsyvffledrlavmmrvlkeygvdptkirgnipatsddepfdlk/srtackrcrlKKIkcdqefpsckrcaklevpcvsldpatgkdvprsyvffledrlavmmrvlkeygvdpt >1pzu_BHIM:p53-like_transcription_factors;E_set_domains;"Winged_helix"_DNA-binding_domain; title=AN ASYMMETRIC NFAT1-RHR HOMODIMER ON A PSEUDO-PALINDROMIC, KAPPA-B SITE organism=Homo sapiens DNA sequence DG(T3):DC(W14) DA(T4):DT(W13) DG(T5):DC(W12) DG(T6):DC(W11) DA(T7):DT(W10) DA(T8):DT(W9) DT(T9):DA(W8) DT(T10):DA(W7) DT(T11):DA(W6) DC(T12):DG(W5) DC(T13):DG(W4) DA(T14):DT(W3) DT(V1):DA(W2) DT(V2):DA(W1) DG(V3):DC(Z14) DA(V4):DT(Z13) DG(V5):DC(Z12) DG(V6):DC(Z11) DA(V7):DT(Z10) DA(V8):DT(Z9) DT(V9):DA(Z8) DT(V10):DA(Z7) DT(V11):DA(Z6) DC(V12):DG(Z5) DC(V13):DG(Z4) DA(V14):DT(Z3) DT(X1):DA(Z2) DT(X2):DA(Z1) DG(X3):DC(Y14) DA(X4):DT(Y13) DG(X5):DC(Y12) DG(X6):DC(Y11) DA(X7):DT(Y10) DA(X8):DT(Y9) DT(X9):DA(Y8) DT(X10):DA(Y7) DT(X11):DA(Y6) DC(X12):DG(Y5) DC(X13):DG(Y4) DA(X14):DT(Y3) chainB ( 23) ARG421 0 0 0 0 0 0 0 0 5 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) TYR424 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLU427 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG430 0 0 0 0 0 0 0 0 0 4 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG537 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLN571 0 0 0 0 0 0 0 1 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 23) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) TYR424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLU427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLN571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI ( 23) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) TYR424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLU427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLN571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 23) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 2 0 0 0 0 0 0 0 ( 26) TYR424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 ( 29) GLU427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 ( 32) ARG430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 1 0 0 0 0 0 0 0 0 (139) ARG537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 (173) GLN571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 1 0 0 0 0 0 0 prot.sequence wplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv/wplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv/wplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv/wplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv >1pzu_M:p53-like_transcription_factors;E_set_domains; title=AN ASYMMETRIC NFAT1-RHR HOMODIMER ON A PSEUDO-PALINDROMIC, KAPPA-B SITE organism=Homo sapiens DNA sequence DT(Y3):DA(X14) DG(Y4):DC(X13) DG(Y5):DC(X12) DA(Y6):DT(X11) DA(Y7):DT(X10) DA(Y8):DT(X9) DT(Y9):DA(X8) DT(Y10):DA(X7) DC(Y11):DG(X6) DC(Y12):DG(X5) DT(Y13):DA(X4) DC(Y14):DG(X3) DA(Z1):DT(X2) DA(Z2):DT(X1) DT(Z3):DA(V14) DG(Z4):DC(V13) DG(Z5):DC(V12) DA(Z6):DT(V11) DA(Z7):DT(V10) DA(Z8):DT(V9) DT(Z9):DA(V8) DT(Z10):DA(V7) DC(Z11):DG(V6) DC(Z12):DG(V5) DT(Z13):DA(V4) DC(Z14):DG(V3) DA(W1):DT(V2) DA(W2):DT(V1) DT(W3):DA(T14) DG(W4):DC(T13) DG(W5):DC(T12) DA(W6):DT(T11) DA(W7):DT(T10) DA(W8):DT(T9) DT(W9):DA(T8) DT(W10):DA(T7) DC(W11):DG(T6) DC(W12):DG(T5) DT(W13):DA(T4) DC(W14):DG(T3) chainM ( 23) ARG421 0 0 0 0 0 0 0 2 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) TYR424 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLU427 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG430 0 0 0 0 0 0 0 0 1 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG537 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLN571 0 0 0 0 0 0 1 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv >1q0t_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=TERNARY STRUCTURE OF T4DAM WITH ADOHCY AND DNA organism=Enterobacteria phage T4 DNA sequence DA(C402):DT(D433) DC(C403):DG(D432) DA(C404):DT(D431) DG(C405):DC(D430) DG(C406):DC(D429) DA(C407):DT(D428) DT(C408):DA(D427) DC(C409):DG(D426) DC(C410):DG(D425) DT(C411):DA(D424) DG(C412):DC(D423) DT(C413):DA(D422) chainA (135) ASN135 0 0 0 0 0 0 0 0 0 2 0 0 (138) LYS138 0 0 0 0 0 0 0 0 0 0 2 0 chainB prot.sequence mlgaiaytgnkqsllpelkshfpkynrfvdlfcgglsvslnvngpvlandiqepiiemykrlinvswddvlkvikqyklsktskeeflklredynktrdplllyvlhfhgfsnmirindkgnfttpfgkrtinkNseKqynhfkqncdkiifsslhfkdvkildgdfvyvdppylitvadynkfwsedeekdllnlldslndrgikfgqsnvlehhgkentllkewskkynvkhlevyifn/mlgaiaytgnkqsllpelkshfpkynrfvdlfcgglsvslnvngpvlandiqepiiemykrlinvswddvlkvikqyklsktskeeflklredynktrdplllyvlhfhgfsnmirindkgnfttpfgkrtinkNseKqynhfkqncdkiifsslhfkdvkildgdfvyvdppylitvadynkfwsedeekdllnlldslndrgikfgqsnvlehhgkentllkewskkynvkhlevyifn >1q3f_A:Uracil-DNA_glycosylase-like; title=URACIL DNA GLYCOSYLASE BOUND TO A CATIONIC 1-AZA-2'-DEOXYRIBOSE- CONTAINING DNA organism=Homo sapiens DNA sequence DA(C22):DT(B10) DA(C23):DT(B9) DG(C24):DC(B8) DA(C25):DT(B7) DT(C26):DA(B6) DA(C27):NRI(B5) DA(C28):DT(B4) DC(C29):DG(B3) DA(C30):DT(B2) chainA (190) PRO271 0 0 0 0 0 0 6 0 0 (191) LEU272 0 0 0 0 32 3 21 0 0 (194) TYR275 0 0 0 0 0 0 1 0 0 (195) ARG276 0 0 0 1 2 0 0 0 0 prot.sequence meffgeswkkhlsgefgkpyfiklmgfvaeerkhytvyppphqvftwtqmcdikdvkvvilgqdpyhgpnqahglcfsvqrpvppppsleniykelstdiedfvhpghgdlsgwakqgvlllnavltvrahqanshkergweqftdavvswlnqnsnglvfllwgsyaqkkgsaidrkrhhvlqtahpsPLsvYRgffgcrhfsktnellqksgkkpidwkel >1q3u_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF A WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE: PRE- CLEAVAGE COMPLEX organism=Enterobacteria phage P1 DNA sequence DG(C101):DC(D136) DA(C102):DT(D135) DT(C103):DA(D134) DA(C104):DT(D133) DA(C105):DT(D132) DC(C106):DG(D131) UMP(C107):DA(D130) DT(C108):DA(D129) DC(C109):DG(D128) DG(C110):DC(D127) DT(C111):DA(D126) DA(C112):DT(D125) DT(C113):DA(D124) DA(C114):DT(D123) DA(C115):DT(D122) DT(C116):DA(D121) DG(C117):DC(D120) DT(C118):DA(D119) DA(C119):DT(D118) DT(C120):DA(D117) DG(C121):DC(D116) DC(C122):DG(D115) DT(C123):DA(D114) DA(C124):DT(D113) DT(C125):DA(D112) DA(C126):DT(D111) DC(C127):DG(D110) DG(C128):DC(D109) DA(C129):DT(D108) DA(C130):DT(D107) DG(C131):DC(D106) DT(C132):DA(D105) DT(C133):DA(D104) DA(C134):DT(D103) DT(C135):DA(D102) DC(C136):DG(D101) chainA ( 31) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 ( 32) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 3 0 0 0 0 0 0 0 0 0 0 ( 38) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 77) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (235) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 3 (248) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (250) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 19 11 0 0 0 0 0 0 0 (251) ALA260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (253) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 (273) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 (308) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nlpalpvdatsdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRAlEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnldsetgamvrlled >1q3v_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF A WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE: PHOSPHOTYROSINE COVALENT INTERMEDIATE organism=Enterobacteria phage P1 DNA sequence DG(D101):DC(X136) DA(D102):DT(X135) DT(D103):DA(X134) DA(D104):DT(X133) DA(D105):DT(X132) DC(D106):DG(X131) DT(D107):DA(X130) DT(D108):DA(X129) DC(D109):DG(X128) DG(D110):DC(X127) DT(D111):DA(X126) DA(D112):DT(X125) DT(D113):DA(X124) DA(D114):DT(X123) DG(D115):DC(X122) DC(D116):DG(X121) DA(D117):DT(X120) DT(D118):DA(X119) DA(D119):DT(X118) DC(D120):DG(X117) DA(D121):DT(X116) DT(D122):A3P(C115) DT(D123):DA(C114) DA(D124):DT(C113) DT(D125):DA(C112) DA(D126):DT(C111) DC(D127):DG(C110) DG(D128):DC(C109) DA(D129):DT(C108) DA(D130):UMP(C107) DG(D131):DC(C106) DT(D132):DA(C105) DT(D133):DA(C104) DA(D134):DT(C103) DT(D135):DA(C102) DC(D136):DG(C101) chainA ( 31) HIS40 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) MET44 0 0 0 0 0 0 0 0 0 0 2 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER47 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) THR87 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ARG241 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) ARG243 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) LYS244 1 6 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) SER257 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) ARG259 0 0 0 0 0 0 2 10 13 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) GLU262 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (273) ARG282 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nlpalpvdatsdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnldsetgamvrlled >1q3v_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF A WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE: PHOSPHOTYROSINE COVALENT INTERMEDIATE organism=Enterobacteria phage P1 DNA sequence DG(C101):DC(D136) DA(C102):DT(D135) DT(C103):DA(D134) DA(C104):DT(D133) DA(C105):DT(D132) DC(C106):DG(D131) UMP(C107):DA(D130) DT(C108):DA(D129) DC(C109):DG(D128) DG(C110):DC(D127) DT(C111):DA(D126) DA(C112):DT(D125) DT(C113):DA(D124) DA(C114):DT(D123) A3P(C115):DT(D122) DT(X116):DA(D121) DG(X117):DC(D120) DT(X118):DA(D119) DA(X119):DT(D118) DT(X120):DA(D117) DG(X121):DC(D116) DC(X122):DG(D115) DT(X123):DA(D114) DA(X124):DT(D113) DT(X125):DA(D112) DA(X126):DT(D111) DC(X127):DG(D110) DG(X128):DC(D109) DA(X129):DT(D108) DA(X130):DT(D107) DG(X131):DC(D106) DT(X132):DA(D105) DT(X133):DA(D104) DA(X134):DT(D103) DT(X135):DA(D102) DC(X136):DG(D101) chainA ( 31) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 ( 32) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 2 0 0 0 0 0 0 0 0 0 0 ( 38) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 77) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (234) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (235) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 6 1 (248) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 (250) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 13 10 2 0 0 0 0 0 0 (253) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 (273) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 (308) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 2 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 7 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG243 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 0 7 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 5 14 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ASN319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nlpalpvdatsdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvNIvmnyirnldsetgamvrlled >1q3v_EF:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF A WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE: PHOSPHOTYROSINE COVALENT INTERMEDIATE organism=Enterobacteria phage P1 DNA sequence DG(G101):DC(H136) DA(G102):DT(H135) DT(G103):DA(H134) DA(G104):DT(H133) DA(G105):DT(H132) DC(G106):DG(H131) UMP(G107):DA(H130) DT(G108):DA(H129) DC(G109):DG(H128) DG(G110):DC(H127) DT(G111):DA(H126) DA(G112):DT(H125) DT(G113):DA(H124) DA(G114):DT(H123) A3P(G115):DT(H122) DT(Y116):DA(H121) DG(Y117):DC(H120) DT(Y118):DA(H119) DA(Y119):DT(H118) DT(Y120):DA(H117) DG(Y121):DC(H116) DC(Y122):DG(H115) DT(Y123):DA(H114) DA(Y124):DT(H113) DT(Y125):DA(H112) DA(Y126):DT(H111) DC(Y127):DG(H110) DG(Y128):DC(H109) DA(Y129):DT(H108) DA(Y130):DT(H107) DG(Y131):DC(H106) DT(Y132):DA(H105) DT(Y133):DA(H104) DA(Y134):DT(H103) DT(Y135):DA(H102) DC(Y136):DG(H101) chainE ( 20) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 ( 21) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 2 0 0 0 0 0 0 0 0 0 0 ( 27) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 66) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 (224) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 7 0 (237) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (239) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 17 11 1 0 0 0 0 0 0 (242) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 (262) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 (296) THR316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 1 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 9 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 1 7 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 8 14 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ASN319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence devrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwTNvnivmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvNivmnyirnldsetgamvrlled >1q9x_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF ENTEROBACTERIA PHAGE RB69 GP43 DNA POLYMERASE COMPLEXED WITH TETRAHYDROFURAN CONTAINING DNA organism=Enterobacteria phage RB69 DNA sequence DG(H914):DC(L952) DT(H915):DA(L951) DA(H916):DT(L950) DA(H917):DT(L949) DG(H918):DC(L948) DC(H919):DG(L947) DA(H920):DT(L946) DG(H921):DC(L945) DT(H922):DA(L944) DC(H923):DG(L943) DC(H924):DG(L942) DG(H925):DC(L941) DC(H926):DG(L940) chainD (706) LYS706 7 5 0 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 1 0 0 0 0 0 0 0 0 0 0 (800) LYS800 0 0 0 0 0 0 3 5 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >1q9y_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF ENTEROBACTERIA PHAGE RB69 GP43 DNA POLYMERASE COMPLEXED WITH 8-OXOGUANOSINE CONTAINING DNA organism=Enterobacteria phage RB69 DNA sequence DG(T911):DC(P937) DT(T912):DA(P936) DA(T913):DT(P935) DA(T914):DT(P934) DG(T915):DC(P933) DC(T916):DG(P932) DA(T917):DT(P931) DG(T918):DC(P930) DT(T919):DA(P929) DC(T920):DG(P928) DC(T921):DG(P927) DG(T922):DC(P926) DC(T923):DG(P925) chainA (709) LYS709 6 4 0 0 0 0 0 0 0 0 0 0 0 (737) LYS737 0 0 1 2 0 0 0 0 0 0 0 0 0 (803) LYS803 0 0 0 0 0 0 3 3 0 0 0 0 0 prot.sequence hgsmkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfd >1qai_AB:DNA/RNA_polymerases; title=CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN organism=Moloney murine leukemia virus DNA sequence DC(C1):DG(D8) DA(C2):DT(D7) DT(C3):DA(D6) DG(C4):DC(D5) DC(C5):DG(D4) DA(C6):DT(D3) DT(C7):DA(D2) DG(C8):DC(D1) chainA ( 76) LEU99 9 0 0 0 0 0 0 0 ( 91) ASP114 16 0 0 0 0 0 0 0 ( 93) ARG116 7 9 4 0 0 0 0 0 chainB ( 41) TYR64 0 0 0 0 0 0 0 10 ( 76) LEU99 0 0 0 0 0 0 0 17 ( 91) ASP114 0 0 0 0 0 0 0 13 ( 93) ARG116 0 0 0 0 0 3 9 6 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllk/twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllk >1qai_B:DNA/RNA_polymerases; title=CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN organism=Moloney murine leukemia virus DNA sequence DC(C1):DG(D8) DA(C2):DT(D7) DT(C3):DA(D6) DG(C4):DC(D5) DC(C5):DG(D4) DA(C6):DT(D3) DT(C7):DA(D2) DG(C8):DC(D1) chainB ( 41) TYR64 0 0 0 0 0 0 0 10 ( 76) LEU99 0 0 0 0 0 0 0 17 ( 91) ASP114 0 0 0 0 0 0 0 13 ( 93) ARG116 0 0 0 0 0 3 9 6 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllk >1qaj_A:DNA/RNA_polymerases; title=CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN organism=Moloney murine leukemia virus DNA sequence DC(C1):DG(D8) DA(C2):DT(D7) DT(C3):DA(D6) DG(C4):DC(D5) DC(C5):DG(D4) DA(C6):DT(D3) DT(C7):DA(D2) DG(C8):DC(D1) chainA ( 80) LEU99 10 0 0 0 0 0 0 0 ( 82) VAL101 3 0 0 0 0 0 0 0 ( 93) VAL112 6 0 0 0 0 0 0 0 ( 95) ASP114 6 0 0 0 0 0 0 0 ( 97) ARG116 4 11 5 0 0 0 0 0 prot.sequence gshmtwlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiqrlldqgilvpcqspwntplLpVkkpgtndyrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >1qbj_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ZALPHA Z-DNA COMPLEX organism=Homo sapiens DNA sequence DC(F1) DG(F2) DC(F3) DG(F4) DC(F5) DG(F6) chainC ( 41) ARG174 0 0 0 0 0 7 ( 44) TYR177 0 0 0 16 0 0 prot.sequence siyqdqeqrilkfleelgegkattahdlsgklgtpkkeinRvlYslakkgklqkeagtpplwkiav >1qln_A:DNA/RNA_polymerases; title=STRUCTURE OF A TRANSCRIBING T7 RNA POLYMERASE INITIATION COMPLEX organism=BACTERIOPHAGE T7 DNA sequence DA(T9):DT(N114) DG(T10):DC(N113) DT(T11):DA(N112) DG(T12):DC(N111) DA(T13):DT(N110) DG(T14):DC(N109) DT(T15):DA(N108) DC(T16):DG(N107) DG(T17):DC(N106) DT(T18):DA(N105) DA(T19):DT(N104) DT(T20):DA(N103) DT(T21):DA(N102) DA(T22):DT(N101) chainA ( 75) ARG96 0 0 0 0 0 0 0 0 0 0 0 7 10 14 ( 77) LYS98 0 0 0 0 0 0 0 0 2 8 2 0 0 0 (114) GLN135 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) SER139 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) LYS206 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) ARG231 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (213) ALA234 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) VAL237 0 18 0 0 0 0 0 0 0 0 0 0 0 0 (219) ASP240 0 9 0 0 0 0 0 0 0 0 0 0 0 0 (725) ARG746 0 0 18 10 0 0 0 0 0 0 0 0 0 0 (727) ASN748 0 0 0 0 0 0 1 8 2 0 0 0 0 0 (735) ARG756 0 0 0 0 9 11 6 0 0 0 0 0 0 0 (737) GLN758 0 0 0 9 9 0 0 0 0 0 0 0 0 0 (739) THR760 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (740) ILE761 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (741) ASN762 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmfplittllpkmiarindwfeevkakRgKrptafqflqeikpeavayitikttlacltsadnttvQavaSaigraiedearfgrirdleakhfkknveeqlnkrvghvykkafmqvveadmlskgllggeawsswhKedsihvgvrciemliestgmvslhRqnAgvVgqDsetielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiereelpmkpedidmnpealtawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvtvtdentgeisekvklgtkalagqwlaygvtrsvtkrsvmtlaygskefgfrqqvledtiqpaidsgkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtRlNlmflgqfRlQpTINtnkdseidahkqesgiapnfvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa >1qn3_A:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE C(-25) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION. organism=ARABIDOPSIS THALIANA DNA sequence DG(C201):DC(D228) DC(C202):DG(D227) DT(C203):DA(D226) DA(C204):DT(D225) DT(C205):DA(D224) DA(C206):DT(D223) DA(C207):DT(D222) DA(C208):DT(D221) DC(C209):DG(D220) DG(C210):DC(D219) DG(C211):DC(D218) DG(C212):DC(D217) DC(C213):DG(D216) DA(C214):DT(D215) chainA ( 12) ASN27 0 0 0 0 0 8 5 0 0 0 0 0 0 0 ( 14) VAL29 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 42) PHE57 0 0 0 0 0 0 0 0 16 7 0 0 0 0 ( 57) LEU72 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 59) PHE74 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 65) VAL80 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 67) THR82 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (102) ASN117 0 0 0 0 0 5 6 0 0 0 0 0 0 0 (104) VAL119 0 0 0 0 2 5 0 0 0 0 0 0 0 0 (133) PHE148 0 0 8 24 0 0 0 0 0 0 0 0 0 0 (134) PRO149 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (148) LEU163 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (150) PHE165 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (156) VAL171 0 0 0 1 4 0 0 0 0 0 0 0 0 0 (158) THR173 0 0 0 0 2 8 0 0 0 0 0 0 0 0 prot.sequence khpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >1qn4_A:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE T(-24) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION. organism=ARABIDOPSIS THALIANA DNA sequence DT(D215):DA(C214) DG(D216):DC(C213) DC(D217):DG(C212) DC(D218):DG(C211) DA(D219):DT(C210) DT(D220):DA(C209) DT(D221):DA(C208) DT(D222):DA(C207) DT(D223):DA(C206) DA(D224):DT(C205) DT(D225):DA(C204) DA(D226):DT(C203) DG(D227):DC(C202) DC(D228):DG(C201) chainA ( 12) ASN27 0 0 0 0 0 0 0 5 8 0 0 0 0 0 ( 14) VAL29 0 0 0 0 0 0 2 5 0 0 0 0 0 0 ( 42) PHE57 0 0 0 0 10 23 0 0 0 0 0 0 0 0 ( 57) LEU72 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 59) PHE74 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 65) VAL80 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 67) THR82 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (102) ASN117 0 0 0 0 0 0 0 6 4 0 0 0 0 0 (104) VAL119 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (133) PHE148 0 0 0 0 0 0 0 0 0 0 28 8 0 0 (134) PRO149 0 0 0 0 0 0 0 0 0 0 0 6 3 0 (148) LEU163 0 0 0 0 0 0 0 0 0 2 3 0 0 0 (150) PHE165 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (156) VAL171 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (158) THR173 0 0 0 0 0 0 0 0 6 2 0 0 0 0 prot.sequence khpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >1qn5_B:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE G(-26) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION. organism=ARABIDOPSIS THALIANA DNA sequence DG(E201):DC(F228) DC(E202):DG(F227) DT(E203):DA(F226) DA(E204):DT(F225) DT(E205):DA(F224) DA(E206):DT(F223) DA(E207):DT(F222) DG(E208):DC(F221) DA(E209):DT(F220) DG(E210):DC(F219) DG(E211):DC(F218) DG(E212):DC(F217) DC(E213):DG(F216) DA(E214):DT(F215) chainB ( 16) ASN27 0 0 0 0 0 8 5 0 0 0 0 0 0 0 ( 18) VAL29 0 0 0 0 0 0 5 4 0 0 0 0 0 0 ( 46) PHE57 0 0 0 0 0 0 0 0 17 8 0 0 0 0 ( 61) LEU72 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 63) PHE74 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 69) VAL80 0 0 0 0 0 0 0 3 3 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 0 2 5 0 0 0 0 0 0 (106) ASN117 0 0 0 0 0 5 6 0 0 0 0 0 0 0 (108) VAL119 0 0 0 0 2 5 0 0 0 0 0 0 0 0 (137) PHE148 0 0 11 26 0 0 0 0 0 0 0 0 0 0 (138) PRO149 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (152) LEU163 0 0 0 3 4 0 0 0 0 0 0 0 0 0 (154) PHE165 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (160) VAL171 0 0 0 3 5 0 0 0 0 0 0 0 0 0 (162) THR173 0 0 0 0 1 6 0 0 0 0 0 0 0 0 prot.sequence vdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrk >1qn6_B:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE T(-26) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION. organism=ARABIDOPSIS THALIANA DNA sequence DG(E201):DC(F228) DC(E202):DG(F227) DT(E203):DA(F226) DA(E204):DT(F225) DT(E205):DA(F224) DA(E206):DT(F223) DA(E207):DT(F222) DT(E208):DA(F221) DA(E209):DT(F220) DG(E210):DC(F219) DG(E211):DC(F218) DG(E212):DC(F217) DC(E213):DG(F216) DA(E214):DT(F215) chainB ( 16) ASN27 0 0 0 0 0 8 5 0 0 0 0 0 0 0 ( 18) VAL29 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 46) PHE57 0 0 0 0 0 0 0 0 18 11 0 0 0 0 ( 61) LEU72 0 0 0 0 0 0 0 3 3 0 0 0 0 0 ( 63) PHE74 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 69) VAL80 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (106) ASN117 0 0 0 0 0 4 7 0 0 0 0 0 0 0 (108) VAL119 0 0 0 0 2 5 0 0 0 0 0 0 0 0 (137) PHE148 0 0 8 27 0 0 0 0 0 0 0 0 0 0 (138) PRO149 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (152) LEU163 0 0 0 3 3 0 0 0 0 0 0 0 0 0 (154) PHE165 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (160) VAL171 0 0 0 3 6 0 0 0 0 0 0 0 0 0 (162) THR173 0 0 0 0 2 8 0 0 0 0 0 0 0 0 prot.sequence vdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >1qn7_B:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE T(-27) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION. organism=ARABIDOPSIS THALIANA DNA sequence DT(F215):DA(E214) DG(F216):DC(E213) DC(F217):DG(E212) DC(F218):DG(E211) DC(F219):DG(E210) DT(F220):DA(E209) DT(F221):DA(E208) DA(F222):DT(E207) DT(F223):DA(E206) DA(F224):DT(E205) DT(F225):DA(E204) DA(F226):DT(E203) DG(F227):DC(E202) DC(F228):DG(E201) chainB ( 16) ASN27 0 0 0 0 0 0 0 6 9 0 0 0 0 0 ( 18) VAL29 0 0 0 0 0 0 2 6 0 0 0 0 0 0 ( 46) PHE57 0 0 0 0 7 16 0 0 0 0 0 0 0 0 ( 61) LEU72 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 63) PHE74 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 69) VAL80 0 0 0 0 0 4 4 0 0 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 0 3 4 0 0 0 0 0 0 (106) ASN117 0 0 0 0 0 0 0 8 5 0 0 0 0 0 (108) VAL119 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (137) PHE148 0 0 0 0 0 0 0 0 0 0 24 11 0 0 (138) PRO149 0 0 0 0 0 0 0 0 0 0 0 7 3 0 (152) LEU163 0 0 0 0 0 0 0 0 0 4 3 0 0 0 (154) PHE165 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (160) VAL171 0 0 0 0 0 0 0 0 0 5 3 0 0 0 (162) THR173 0 0 0 0 0 0 0 0 9 2 0 0 0 0 prot.sequence vdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrk >1qn8_B:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE T(-28) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION. organism=ARABIDOPSIS THALIANA DNA sequence DT(F215):DA(E214) DG(F216):DC(E213) DC(F217):DG(E212) DC(F218):DG(E211) DC(F219):DG(E210) DT(F220):DA(E209) DT(F221):DA(E208) DT(F222):DA(E207) DA(F223):DT(E206) DA(F224):DT(E205) DT(F225):DA(E204) DA(F226):DT(E203) DG(F227):DC(E202) DC(F228):DG(E201) chainB ( 16) ASN27 0 0 0 0 0 0 0 5 6 0 0 0 0 0 ( 18) VAL29 0 0 0 0 0 0 2 5 0 0 0 0 0 0 ( 46) PHE57 0 0 0 0 10 18 0 0 0 0 0 0 0 0 ( 61) LEU72 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 63) PHE74 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 69) VAL80 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 0 3 2 0 0 0 0 0 0 (106) ASN117 0 0 0 0 0 0 0 5 5 0 0 0 0 0 (108) VAL119 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (137) PHE148 0 0 0 0 0 0 0 0 0 0 27 11 0 0 (138) PRO149 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (152) LEU163 0 0 0 0 0 0 0 0 0 3 3 0 0 0 (154) PHE165 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (160) VAL171 0 0 0 0 0 0 0 0 0 4 3 0 0 0 (162) THR173 0 0 0 0 0 0 0 0 5 2 0 0 0 0 prot.sequence vdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >1qn9_B:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE C(-29) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION. organism=ARABIDOPSIS THALIANA DNA sequence DG(E201):DC(F228) DC(E202):DG(F227) DT(E203):DA(F226) DA(E204):DT(F225) DC(E205):DG(F224) DA(E206):DT(F223) DA(E207):DT(F222) DA(E208):DT(F221) DA(E209):DT(F220) DG(E210):DC(F219) DG(E211):DC(F218) DG(E212):DC(F217) DC(E213):DG(F216) DA(E214):DT(F215) chainB ( 16) ASN27 0 0 0 0 0 9 5 0 0 0 0 0 0 0 ( 18) VAL29 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 46) PHE57 0 0 0 0 0 0 0 0 19 7 0 0 0 0 ( 61) LEU72 0 0 0 0 0 0 0 1 3 0 0 0 0 0 ( 63) PHE74 0 0 0 0 0 0 0 0 7 0 0 0 0 0 ( 69) VAL80 0 0 0 0 0 0 0 2 2 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (106) ASN117 0 0 0 0 0 5 6 0 0 0 0 0 0 0 (108) VAL119 0 0 0 0 3 5 0 0 0 0 0 0 0 0 (137) PHE148 0 0 7 16 0 0 0 0 0 0 0 0 0 0 (138) PRO149 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (152) LEU163 0 0 0 3 3 0 0 0 0 0 0 0 0 0 (154) PHE165 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (160) VAL171 0 0 0 1 4 0 0 0 0 0 0 0 0 0 (162) THR173 0 0 0 0 3 7 0 0 0 0 0 0 0 0 prot.sequence vdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrk >1qna_B:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE T(-30) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION. organism=ARABIDOPSIS THALIANA DNA sequence DG(E201):DC(F228) DC(E202):DG(F227) DT(E203):DA(F226) DT(E204):DA(F225) DT(E205):DA(F224) DA(E206):DT(F223) DA(E207):DT(F222) DA(E208):DT(F221) DA(E209):DT(F220) DG(E210):DC(F219) DG(E211):DC(F218) DG(E212):DC(F217) DC(E213):DG(F216) DA(E214):DT(F215) chainB ( 16) ASN27 0 0 0 0 0 8 5 0 0 0 0 0 0 0 ( 18) VAL29 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 46) PHE57 0 0 0 0 0 0 0 0 16 9 0 0 0 0 ( 61) LEU72 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 63) PHE74 0 0 0 0 0 0 0 0 6 0 0 0 0 0 ( 69) VAL80 0 0 0 0 0 0 0 3 3 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (106) ASN117 0 0 0 0 0 5 6 0 0 0 0 0 0 0 (108) VAL119 0 0 0 0 2 5 0 0 0 0 0 0 0 0 (137) PHE148 0 0 9 19 0 0 0 0 0 0 0 0 0 0 (138) PRO149 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (152) LEU163 0 0 0 3 3 0 0 0 0 0 0 0 0 0 (154) PHE165 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (160) VAL171 0 0 0 2 5 0 0 0 0 0 0 0 0 0 (162) THR173 0 0 0 0 2 9 0 0 0 0 0 0 0 0 prot.sequence vdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrk >1qnb_A:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE T(-25) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION. organism=ARABIDOPSIS THALIANA DNA sequence DT(D215):DA(C214) DG(D216):DC(C213) DC(D217):DG(C212) DC(D218):DG(C211) DC(D219):DG(C210) DA(D220):DT(C209) DT(D221):DA(C208) DT(D222):DA(C207) DT(D223):DA(C206) DA(D224):DT(C205) DT(D225):DA(C204) DA(D226):DT(C203) DG(D227):DC(C202) DC(D228):DG(C201) chainA ( 12) ASN27 0 0 0 0 0 0 0 5 10 0 0 0 0 0 ( 14) VAL29 0 0 0 0 0 0 2 5 0 0 0 0 0 0 ( 42) PHE57 0 0 0 0 8 28 0 0 0 0 0 0 0 0 ( 57) LEU72 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 59) PHE74 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 65) VAL80 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 67) THR82 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (102) ASN117 0 0 0 0 0 0 0 6 5 0 0 0 0 0 (104) VAL119 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (133) PHE148 0 0 0 0 0 0 0 0 0 0 23 12 0 0 (134) PRO149 0 0 0 0 0 0 0 0 0 0 0 6 0 0 (148) LEU163 0 0 0 0 0 0 0 0 0 3 3 0 0 0 (150) PHE165 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (156) VAL171 0 0 0 0 0 0 0 0 0 5 1 0 0 0 (158) THR173 0 0 0 0 0 0 0 0 7 2 0 0 0 0 prot.sequence khpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >1qnc_A:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE A(-31) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION. organism=ARABIDOPSIS THALIANA DNA sequence DT(D215):DA(C214) DG(D216):DC(C213) DC(D217):DG(C212) DC(D218):DG(C211) DC(D219):DG(C210) DT(D220):DA(C209) DT(D221):DA(C208) DT(D222):DA(C207) DT(D223):DA(C206) DA(D224):DT(C205) DT(D225):DA(C204) DT(D226):DA(C203) DG(D227):DC(C202) DC(D228):DG(C201) chainA ( 12) ASN27 0 0 0 0 0 0 0 5 9 0 0 0 0 0 ( 14) VAL29 0 0 0 0 0 0 2 5 0 0 0 0 0 0 ( 42) PHE57 0 0 0 0 6 16 0 0 0 0 0 0 0 0 ( 57) LEU72 0 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 59) PHE74 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 65) VAL80 0 0 0 0 0 1 3 0 0 0 0 0 0 0 ( 67) THR82 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (102) ASN117 0 0 0 0 0 0 0 6 4 0 0 0 0 0 (104) VAL119 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (133) PHE148 0 0 0 0 0 0 0 0 0 0 26 8 0 0 (134) PRO149 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (148) LEU163 0 0 0 0 0 0 0 0 0 3 3 0 0 0 (150) PHE165 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (156) VAL171 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (158) THR173 0 0 0 0 0 0 0 0 6 2 0 0 0 0 prot.sequence khpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >1qne_B:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE ADENOVIRUS MAJOR LATE PROMOTER TATA BOX BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). organism=ARABIDOPSIS THALIANA DNA sequence DT(F215):DA(E214) DG(F216):DC(E213) DC(F217):DG(E212) DC(F218):DG(E211) DC(F219):DG(E210) DT(F220):DA(E209) DT(F221):DA(E208) DT(F222):DA(E207) DT(F223):DA(E206) DA(F224):DT(E205) DT(F225):DA(E204) DA(F226):DT(E203) DG(F227):DC(E202) DC(F228):DG(E201) chainB ( 17) ASN27 0 0 0 0 0 0 0 5 9 0 0 0 0 0 ( 19) VAL29 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 47) PHE57 0 0 0 0 8 17 0 0 0 0 0 0 0 0 ( 62) LEU72 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 64) PHE74 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 70) VAL80 0 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 72) THR82 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (107) ASN117 0 0 0 0 0 0 0 6 4 0 0 0 0 0 (109) VAL119 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (138) PHE148 0 0 0 0 0 0 0 0 0 0 22 11 0 0 (139) PRO149 0 0 0 0 0 0 0 0 0 0 0 6 2 0 (153) LEU163 0 0 0 0 0 0 0 0 0 3 3 0 0 0 (155) PHE165 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (161) VAL171 0 0 0 0 0 0 0 0 0 6 3 0 0 0 (163) THR173 0 0 0 0 0 0 0 0 9 2 0 0 0 0 prot.sequence pvdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >1qp0_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=PURINE REPRESSOR-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX organism=Escherichia coli DNA sequence DT(M699) DA(M700) DC(M701) DG(M702) DC(M703) DA(M704) DA(M705) DC(M706) DC(M707) DG(M708) DG(M709) DT(M710) DT(M711) DG(M712) DC(M713) DG(M714) DT(M715) chainA ( 12) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) THR15 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 2 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 25 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvSTTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1qp4_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=PURINE REPRESSOR-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX organism=Escherichia coli DNA sequence DT(M699) DA(M700) DC(M701) DG(M702) DC(M703) DA(M704) DA(M705) DT(M706) DC(M707) DG(M708) DA(M709) DT(M710) DT(M711) DG(M712) DC(M713) DG(M714) DT(M715) chainA ( 12) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 3 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 24 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 1 6 4 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1qp7_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX organism=Escherichia coli DNA sequence DT(M699) DA(M700) DC(M701) DG(M702) DC(M703) DA(M704) DA(M705) DC(M706) DC(M707) DG(M708) DG(M709) DT(M710) DT(M711) DG(M712) DC(M713) DG(M714) DT(M715) chainA ( 12) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 3 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 24 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 ( 53) ALA55 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLAvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1qp9_A:Leucine_zipper_domain;Zn2/Cys6_DNA-binding_domain; title=STRUCTURE OF HAP1-PC7 COMPLEXED TO THE UAS OF CYC7 organism=Saccharomyces cerevisiae DNA sequence DA(E1):DT(F20) DC(E2):DG(F19) DG(E3):DC(F18) DC(E4):DG(F17) DT(E5):DA(F16) DA(E6):DT(F15) DT(E7):DA(F14) DT(E8):DA(F13) DA(E9):DT(F12) DT(E10):DA(F11) DC(E11):DG(F10) DG(E12):DC(F9) DC(E13):DG(F8) DT(E14):DA(F7) DA(E15):DT(F6) DT(E16):DA(F5) DT(E17):DA(F4) DA(E18):DT(F3) DG(E19):DC(F2) DT(E20):DA(F1) chainA ( 1) ARG55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 6 16 0 ( 16) ARG70 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 17) LYS71 0 0 0 0 0 0 0 0 0 0 14 12 15 0 0 0 0 0 0 0 ( 18) VAL72 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 prot.sequence RkrnriplgcticrkRKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektlsk >1qp9_AB:Zn2/Cys6_DNA-binding_domain;Leucine_zipper_domain; title=STRUCTURE OF HAP1-PC7 COMPLEXED TO THE UAS OF CYC7 organism=Saccharomyces cerevisiae DNA sequence DA(E1):DT(F20) DC(E2):DG(F19) DG(E3):DC(F18) DC(E4):DG(F17) DT(E5):DA(F16) DA(E6):DT(F15) DT(E7):DA(F14) DT(E8):DA(F13) DA(E9):DT(F12) DT(E10):DA(F11) DC(E11):DG(F10) DG(E12):DC(F9) DC(E13):DG(F8) DT(E14):DA(F7) DA(E15):DT(F6) DT(E16):DA(F5) DT(E17):DA(F4) DA(E18):DT(F3) DG(E19):DC(F2) DT(E20):DA(F1) chainA ( 1) ARG55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 6 16 0 ( 16) ARG70 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 17) LYS71 0 0 0 0 0 0 0 0 0 0 14 12 15 0 0 0 0 0 0 0 ( 18) VAL72 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 chainB ( 2) ARG57 0 0 0 0 0 0 0 9 9 11 0 0 0 0 0 0 0 0 0 0 ( 4) ARG59 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LYS71 0 12 13 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RkrnriplgcticrkRKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektlsk/kRnRiplgcticrkrKvkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektls >1qp9_CD:Zn2/Cys6_DNA-binding_domain;Leucine_zipper_domain; title=STRUCTURE OF HAP1-PC7 COMPLEXED TO THE UAS OF CYC7 organism=Saccharomyces cerevisiae DNA sequence DC(G2):DG(H19) DG(G3):DC(H18) DC(G4):DG(H17) DT(G5):DA(H16) DA(G6):DT(H15) DT(G7):DA(H14) DT(G8):DA(H13) DA(G9):DT(H12) DT(G10):DA(H11) DC(G11):DG(H10) DG(G12):DC(H9) DC(G13):DG(H8) DT(G14):DA(H7) DA(G15):DT(H6) DT(G16):DA(H5) DT(G17):DA(H4) DA(G18):DT(H3) chainC ( 14) LYS71 0 0 0 0 0 0 0 0 0 11 12 8 0 0 0 0 0 ( 15) VAL72 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainD ( 3) ARG57 0 0 0 0 0 0 10 11 13 0 0 0 0 0 0 0 0 ( 5) ARG59 0 0 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 ( 17) LYS71 7 12 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL72 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nriplgcticrkrKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektl/rkRnRiplgcticrkrKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektls >1qpi_A:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF TETRACYCLINE REPRESSOR/OPERATOR COMPLEX organism=Escherichia coli DNA sequence DC(M1) DC(M2) DT(M3) DA(M4) DT(M5) DC(M6) DA(M7) DA(M8) DT(M9) DG(M10) DA(M11) DT(M12) DA(M13) DG(M14) DA(M15) chainA ( 25) ARG28 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 36) PRO39 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR40 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TRP43 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lnresvidaalellnetgidglttRklaqklgieqPTlyWhvknkralldalaveilarhhdyslpaageswqsflrnnamsfrrallryrdgakvhlgtrpdekqydtvetqlrfmtengfslrdglyaisavshftlgavleqqehtaalenlppllrealqimdsddgeqaflhgleslirgfevqltallq >1qpz_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=PURINE REPRESSOR-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX organism=Escherichia coli DNA sequence DT(M699) DA(M700) DC(M701) DG(M702) DC(M703) DA(M704) DA(M705) DA(M706) DC(M707) DG(M708) DT(M709) DT(M710) DT(M711) DG(M712) DC(M713) DG(M714) DT(M715) chainA ( 13) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) THR16 0 0 0 5 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG26 0 0 26 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) LEU54 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 ( 54) LYS55 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 prot.sequence atikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1qqa_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX organism=Escherichia coli DNA sequence DT(M699) DA(M700) DC(M701) DG(M702) DC(M703) DA(M704) DA(M705) DG(M706) DC(M707) DG(M708) DC(M709) DT(M710) DT(M711) DG(M712) DC(M713) DG(M714) DT(M715) chainA ( 12) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 4 8 2 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 24 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 ( 53) ALA55 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLAvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1qqb_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX organism=Escherichia coli DNA sequence DT(M699) DA(M700) DC(M701) DG(M702) DC(M703) DA(M704) DA(M705) DT(M706) DC(M707) DG(M708) DA(M709) DT(M710) DT(M711) DG(M712) DC(M713) DG(M714) DT(M715) chainA ( 12) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 5 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 24 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 ( 53) ALA55 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLAvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1qrh_A:Restriction_endonuclease-like; title=X-RAY STRUCTURE OF THE DNA-ECO RI ENDONUCLEASE COMPLEXES WITH AN R145K MUTATION AT 2.7 A organism=ESCHERICHIA COLI DNA sequence DT(M1) DC(M2) DG(M3) DC(M4) DG(M5) DA(M6) DA(M7) DT(M8) DT(M9) DC(M10) DG(M11) DC(M12) DG(M13) chainA ( 99) GLN115 0 0 0 0 0 0 0 4 0 0 0 0 0 (121) MET137 0 0 0 0 0 0 0 0 1 2 0 0 0 (122) ALA138 0 0 0 0 0 0 0 0 0 2 1 0 0 (125) ASN141 0 0 0 0 0 0 0 2 0 0 0 0 0 (126) ALA142 0 0 0 0 0 0 5 4 0 0 0 0 0 (129) LYS145 0 0 0 0 0 2 6 0 0 0 0 0 0 prot.sequence sqgvigifgdyakahdlavgevsklvkkalsneypqlsfryrdsikkteinealkkidpdlggtlfvsnssikpdggivevkddygewrvvlvaeakhQgkdiinirngllvgkrgdqdlMAagNAieKshkniseianfmlseshfpyvlflegsnfltenisitrpdgrvvnleynsgilnrldrltaanygmpinsnlcinkfvnhkdksimlqaasiytqgdgrewdskimfeimfdisttslrvlgrdlfeqltsk >1qri_A:Restriction_endonuclease-like; title=X-RAY STRUCTURE OF THE DNA-ECO RI ENDONUCLEASE COMPLEXES WITH AN E144D MUTATION AT 2.7 A organism=ESCHERICHIA COLI DNA sequence DT(M1) DC(M2) DG(M3) DC(M4) DG(M5) DA(M6) DA(M7) DT(M8) DT(M9) DC(M10) DG(M11) DC(M12) DG(M13) chainA ( 99) GLN115 0 0 0 0 0 0 0 4 0 0 0 0 0 (121) MET137 0 0 0 0 0 0 0 0 2 2 0 0 0 (122) ALA138 0 0 0 0 0 0 0 0 0 3 1 0 0 (125) ASN141 0 0 0 0 0 0 0 1 0 0 0 0 0 (126) ALA142 0 0 0 0 0 0 5 5 0 0 0 0 0 (129) ARG145 0 0 0 0 0 5 12 0 0 0 0 0 0 prot.sequence sqgvigifgdyakahdlavgevsklvkkalsneypqlsfryrdsikkteinealkkidpdlggtlfvsnssiKpdggivevkddygewrvvlvaeakhQgkdiinirngllvgkrgdqdlMAagNAidRshkniseianfmlseshfpyvlflegsnfltenisitrpdgrvvnleynsgilnrldrltaanygmpinsnlcinkfvnhkdksimlqaasiytqgdgrewdskimfeimfdisttslrvlgrdlfeqltsk >1qrv_A:HMG-box; title=CRYSTAL STRUCTURE OF THE COMPLEX OF HMG-D AND DNA organism=Drosophila melanogaster DNA sequence DC(D12):DG(C9) DG(D13):DC(C8) DA(D14):DT(C7) DT(D15):DA(C6) DA(D16):DT(C5) DT(D17):DA(C4) DC(D18):DG(C3) DG(D19):DC(C2) DC(D20):DG(C1) chainA ( 6) ARG7 3 5 0 0 0 0 0 0 0 ( 11) TYR12 0 0 0 6 6 0 0 0 0 ( 12) MET13 0 0 0 12 13 0 0 0 0 ( 15) LEU16 0 0 0 0 3 0 0 0 0 ( 19) ARG20 0 0 0 0 3 2 0 0 0 ( 31) VAL32 0 0 0 0 0 3 4 0 0 ( 32) THR33 0 0 0 0 0 5 5 0 0 ( 35) ALA36 0 0 0 0 4 4 0 0 0 prot.sequence sdkpkRplSaYMlwLnsaResikrenpgikVTevAkrggelwramkdkseweakaakakddydravkefeang >1qrv_AB:HMG-box; title=CRYSTAL STRUCTURE OF THE COMPLEX OF HMG-D AND DNA organism=Drosophila melanogaster DNA sequence DG(C1):DC(D20) DC(C2):DG(D19) DG(C3):DC(D18) DA(C4):DT(D17) DT(C5):DA(D16) DA(C6):DT(D15) DT(C7):DA(D14) DC(C8):DG(D13) DG(C9):DC(D12) chainA ( 6) ARG7 0 0 0 0 0 0 0 5 3 ( 11) TYR12 0 0 0 0 6 6 0 0 0 ( 12) MET13 0 0 0 0 13 12 0 0 0 ( 15) LEU16 0 0 0 0 3 0 0 0 0 ( 19) ARG20 0 0 0 2 3 0 0 0 0 ( 31) VAL32 0 0 4 3 0 0 0 0 0 ( 32) THR33 0 0 5 5 0 0 0 0 0 ( 35) ALA36 0 0 0 4 4 0 0 0 0 chainB ( 7) LEU9 12 0 0 0 0 0 0 0 0 ( 11) MET13 8 0 0 0 0 0 0 0 0 ( 15) ASN17 10 0 0 0 0 0 0 0 0 ( 18) ARG20 1 0 0 0 0 0 0 0 0 prot.sequence sdkpkRplSaYMlwLnsaResikrenpgikVTevAkrggelwramkdkseweakaakakddydravkefeang/dkpkrpLsayMlwlNsaResikrenpgikvtevakrggelwramkdkseweakaakakddydravkefean >1qss_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=DDGTP-TRAPPED CLOSED TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS organism=Thermus aquaticus DNA sequence DC(C204):DG3(A113) DC(C205):DDG(B112) DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (248) LYS540 0 0 0 0 4 5 0 0 0 0 0 0 0 (253) TYR545 0 0 0 1 0 0 0 0 0 0 0 0 0 (281) ARG573 0 11 4 0 0 0 0 0 0 0 0 0 0 (288) ASN580 0 0 0 1 0 0 0 0 0 0 0 0 0 (291) ASN583 0 0 1 10 0 0 0 0 0 0 0 0 0 (295) ARG587 0 4 7 0 0 0 0 0 0 0 0 0 0 (318) ASP610 7 0 0 0 0 0 0 0 0 0 0 0 0 (320) SER612 1 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN613 1 0 0 0 0 0 0 0 0 0 0 0 0 (322) ILE614 3 0 0 0 0 0 0 0 0 0 0 0 0 (323) GLU615 2 0 0 0 0 0 0 0 0 0 0 0 0 (347) HIS639 7 0 0 0 0 0 0 0 0 0 0 0 0 (367) ARG659 5 0 0 0 0 0 0 0 0 0 0 0 0 (368) ARG660 8 2 0 0 0 0 0 0 0 0 0 0 0 (371) LYS663 11 0 0 0 0 0 0 0 0 0 0 0 0 (372) THR664 3 0 0 0 0 0 0 0 0 0 0 0 0 (375) PHE667 30 0 0 0 0 0 0 0 0 0 0 0 0 (379) TYR671 10 0 0 0 0 0 0 0 0 0 0 0 0 (381) MET673 1 0 0 0 0 0 0 0 0 0 0 0 0 (385) ARG677 6 0 0 0 0 0 0 0 0 0 0 0 0 (458) ASN750 1 1 0 0 0 0 0 0 0 0 0 0 0 (462) GLN754 0 4 0 0 0 0 0 0 0 0 0 0 0 (492) HIS784 0 0 1 0 0 0 0 0 0 0 0 0 0 (493) ASP785 8 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeergllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlkstYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvRtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraakTinfgvlYgMsahRlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsak >1qsy_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=DDATP-TRAPPED CLOSED TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS organism=Thermus aquaticus DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (248) LYS540 0 1 4 4 0 0 0 0 0 0 0 (253) TYR545 0 1 0 0 0 0 0 0 0 0 0 (281) ARG573 5 0 0 0 0 0 0 0 0 0 0 (288) ASN580 0 1 0 0 0 0 0 0 0 0 0 (291) ASN583 1 10 0 0 0 0 0 0 0 0 0 (462) GLN754 1 0 0 0 0 0 0 0 0 0 0 (492) HIS784 1 0 0 0 0 0 0 0 0 0 0 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeergllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlkstYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsak >1qtm_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=DDTTP-TRAPPED CLOSED TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) 2DT(B112):DA(C205) TTP(A113):DA(C204) chainA (248) LYS540 0 0 0 0 0 0 0 4 4 0 0 0 0 (253) TYR545 0 0 0 0 0 0 0 0 0 1 0 0 0 (281) ARG573 0 0 0 0 0 0 0 0 0 0 5 4 0 (288) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 0 (291) ASN583 0 0 0 0 0 0 0 0 0 10 1 0 0 (318) ASP610 0 0 0 0 0 0 0 0 0 0 0 0 8 (320) SER612 0 0 0 0 0 0 0 0 0 0 0 0 2 (322) ILE614 0 0 0 0 0 0 0 0 0 0 0 0 3 (323) GLU615 0 0 0 0 0 0 0 0 0 0 0 0 1 (347) HIS639 0 0 0 0 0 0 0 0 0 0 0 0 5 (367) ARG659 0 0 0 0 0 0 0 0 0 0 0 0 5 (368) ARG660 0 0 0 0 0 0 0 0 0 0 0 3 0 (371) LYS663 0 0 0 0 0 0 0 0 0 0 0 0 14 (372) THR664 0 0 0 0 0 0 0 0 0 0 0 0 2 (375) PHE667 0 0 0 0 0 0 0 0 0 0 0 0 23 (379) TYR671 0 0 0 0 0 0 0 0 0 0 0 0 6 (381) MET673 0 0 0 0 0 0 0 0 0 0 0 0 2 (385) ARG677 0 0 0 0 0 0 0 0 0 0 0 0 6 (462) GLN754 0 0 0 0 0 0 0 0 0 0 1 2 0 (492) HIS784 0 0 0 0 0 0 0 0 0 0 1 0 0 (493) ASP785 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraakTinFgvlYgMsahRlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsak >1qum_A:Xylose_isomerase-like; title=CRYSTAL STRUCTURE OF ESCHERICHIA COLI ENDONUCLEASE IV IN COMPLEX WITH DAMAGED DNA organism=Escherichia coli DNA sequence DC(C908):DG(D938) DG(C909):DC(D937) DA(C910):DT(D936) DC(C911):DG(D935) DG(C912):DC(D934) DA(C913):DT(D933) chainA ( 35) ASN35 9 6 0 0 0 0 ( 36) GLN36 5 0 0 0 0 0 ( 37) ARG37 48 0 0 0 0 0 ( 38) GLN38 7 5 0 0 0 0 prot.sequence mkyigahvsaagglanaairaaeidatafalftkNQRQwraaplttqtidefkaacekyhytsaqilphdsylinlghpvtealeksrdafidemqrceqlglsllnfhpgshlmqiseedclariaesinialdktqgvtavientagqgsnlgfkfehlaaiidgvedksrvgvcidtchafaagydlrtpaecektfadfartvgfkylrgmhlndakstfgsrvdrhhslgegnighdafrwimqddrfdgipliletinpdiwaeeiawlkaqq >1qx0_A:Origin_of_replication-binding_domain,_RBD-like; title=CONJUGATIVE RELAXASE TRWC IN COMPLEX WITH ORIT DNA. METAL-BOUND STRUCTURE organism=Escherichia coli DNA sequence DG(B3):DC(B16) DC(B4):DG(B15) DA(B5):DT(B14) DC(B6):DG(B13) DC(B7):DG(B12) DG(B8):DA(B10) chainA ( 69) ALA73 0 0 0 5 2 1 ( 71) ARG75 0 4 9 6 0 0 ( 77) ARG81 1 0 0 0 0 0 (124) ARG128 9 13 11 0 0 0 (126) LYS130 0 0 0 8 0 0 prot.sequence mlshmvltrqdigraasyyedgaddyydasewqgkgaeelglsgevdskrfrellagnigeghrimrsAtRqdskeRigldltfsapksvslqalvagdaeiikahdravartleqaearaqaRqKiqgktriettgnlvigkfrhetsrerdpqlhthavilnmtkrsdgqwralkndeivkatrylgavynaelahelqklgyqlrygkdgnfdlahidrqqiegfskrteqiaewyaargldpnsvsleqkqaakvlsrakktsvdrealraewqatakelgidfs >1r0a_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE COVALENTLY TETHERED TO DNA TEMPLATE-PRIMER SOLVED TO 2.8 ANGSTROMS organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(T706):2DA(P822) DC(T707):DG(P821) DG(T708):DC(P820) DG(T709):DC(P819) DC(T710):DG(P818) DG(T711):DC(P817) DC(T712):DG(P816) DT(T713):DA(P815) DC(T714):DG(P814) DG(T715):DC(P813) DA(T716):DT(P812) DA(T717):DT(P811) DC(T718):DG(P810) DA(T719):DT(P809) DG(T720):DC(P808) DG(T721):DC(P807) DG(T722):DC(P806) DA(T723):DT(P805) DC(T724):DG(P804) DG(T725):DC(P803) chainA ( 94) ILE94 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) ARG356 0 0 0 0 0 0 0 1 0 3 1 0 0 0 0 0 0 0 0 0 (358) ARG358 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmRgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk/pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmRgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >1r0n_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HETERODIMERIC ECDSYONE RECEPTOR DNA BINDING COMPLEX organism=HOMO SAPIENS DNA sequence DC(C2):DG(D36) DG(C3):DC(D35) DA(C4):DT(D34) DG(C5):DC(D33) DG(C6):DC(D32) DT(C7):DA(D31) DC(C8):DG(D30) DA(C9):DT(D29) DA(C10):DT(D28) DT(C11):DA(D27) DG(C12):DC(D26) DA(C13):DT(D25) DC(C14):DG(D24) DC(C15):DG(D23) DT(C16):DA(D22) DC(C17):DG(D21) DG(C18):DC(D20) chainA ( 21) GLU119 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS122 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS126 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG127 0 0 0 0 0 0 9 12 0 0 0 0 0 0 0 0 0 prot.sequence hicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqaaaa >1r0n_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HETERODIMERIC ECDSYONE RECEPTOR DNA BINDING COMPLEX organism=DROSOPHILA MELANOGASTER / HOMO SAPIENS DNA sequence DC(C2):DG(D36) DG(C3):DC(D35) DA(C4):DT(D34) DG(C5):DC(D33) DG(C6):DC(D32) DT(C7):DA(D31) DC(C8):DG(D30) DA(C9):DT(D29) DA(C10):DT(D28) DT(C11):DA(D27) DG(C12):DC(D26) DA(C13):DT(D25) DC(C14):DG(D24) DC(C15):DG(D23) DT(C16):DA(D22) DC(C17):DG(D21) DG(C18):DC(D20) chainA ( 21) GLU119 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS122 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS126 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG127 0 0 0 0 0 0 9 12 0 0 0 0 0 0 0 0 0 chainB ( 15) TYR213 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 21) GLU219 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 24) LYS222 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 0 ( 28) ARG226 0 0 0 0 0 0 0 0 0 0 0 1 9 2 0 0 0 ( 29) ARG227 0 0 0 0 0 0 0 0 0 13 7 0 0 0 0 0 0 ( 53) ARG251 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence hicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqaaaa/elclvcgdrasgyhYnaltcEgcKgffRRsvtksavycckfgracemdmymrRkcqecrlkkclavgmrpecvvpenqcamkrrek >1r0o_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HETERODIMERIC ECDYSONE RECEPTOR DNA-BINDING COMPLEX organism=DROSOPHILA MELANOGASTER DNA sequence DC(D19):DG(C19) DG(D20):DC(C18) DA(D21):DT(C17) DG(D22):DC(C16) DG(D23):DC(C15) DT(D24):DA(C14) DC(D25):DG(C13) DA(D26):DT(C12) DT(D27):DA(C10) DT(D30):DA(C9) DG(D31):DC(C8) DA(D32):DT(C7) DC(D33):DG(C6) DC(D34):DG(C5) DT(D35):DA(C4) DC(D36):DG(C3) DG(D37):DC(C2) chainA ( 21) GLU25 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 ( 24) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 28) LYS32 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 12 7 0 0 0 0 0 0 chainB ( 16) TYR19 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU25 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS28 0 0 1 8 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG32 0 0 0 3 9 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG33 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 prot.sequence hlcsicgdrasgkhygvyscEgcKgffKRtvrkdltyacrenrnciidkrqrnrcqycryqkcltcgmkreavqee/eelclvcgdrasgyhYnaltcEgcKgffRRsvtksavycckfgracemdmymrrkcqecrlkkclavgmrpecvvpen >1r0o_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HETERODIMERIC ECDYSONE RECEPTOR DNA-BINDING COMPLEX organism=DROSOPHILA MELANOGASTER DNA sequence DC(C2):DG(D37) DG(C3):DC(D36) DA(C4):DT(D35) DG(C5):DC(D34) DG(C6):DC(D33) DT(C7):DA(D32) DC(C8):DG(D31) DA(C9):DT(D30) DA(C10):DT(D27) DT(C12):DA(D26) DG(C13):DC(D25) DA(C14):DT(D24) DC(C15):DG(D23) DC(C16):DG(D22) DT(C17):DA(D21) DC(C18):DG(D20) DG(C19):DC(D19) chainB ( 16) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 22) GLU25 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 ( 25) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 0 ( 29) ARG32 0 0 0 0 0 0 0 0 0 0 0 2 9 3 0 0 0 ( 30) ARG33 0 0 0 0 0 0 0 0 0 12 7 0 0 0 0 0 0 prot.sequence eelclvcgdrasgyhYnaltcEgcKgffRRsvtksavycckfgracemdmymrrkcqecrlkkclavgmrpecvvpen >1r2y_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM (FPG) BOUND TO 8-OXOGUANINE (OXOG) CONTAINING DNA organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DG(C13):DC(B12) DT(C14):DA(B11) DC(C15):DG(B10) DC(C16):DG(B9) DA(C17):DT(B8) 8OG(C18):DC(B7) DG(C19):DC(B6) DT(C20):DA(B5) DC(C21):DG(B4) DT(C22):DA(B3) DA(C23):DT(B2) DC(C24):DG(B1) chainA ( 2) GLN3 0 0 0 0 0 5 0 0 0 0 0 0 ( 5) GLU6 0 0 0 0 0 10 0 0 0 0 0 0 ( 75) ARG76 0 0 0 0 0 0 14 3 0 0 0 0 ( 76) MET77 0 0 0 0 0 2 8 0 0 0 0 0 ( 77) GLU78 0 0 0 0 0 4 0 0 0 0 0 0 ( 79) ARG80 0 0 0 0 0 5 0 0 0 0 0 0 (110) VAL111 0 0 0 0 2 0 0 0 0 0 0 0 (111) ARG112 0 0 0 0 72 14 2 0 0 0 0 0 (113) PHE114 0 0 0 0 0 12 32 0 0 0 0 0 (174) ILE175 0 0 0 0 0 4 0 0 0 0 0 0 (220) THR221 0 0 0 0 0 2 0 0 0 0 0 0 (221) VAL222 0 0 0 0 0 6 0 0 0 0 0 0 (222) ARG223 0 0 0 2 10 12 0 0 0 0 0 0 (223) THR224 0 0 0 0 0 4 0 0 0 0 0 0 (224) TYR225 0 0 0 0 0 9 0 0 0 0 0 0 (263) ARG264 0 0 0 0 0 0 3 4 0 0 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdVRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldqtvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkggstvRtyvntqgeagtfqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >1r2z_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM (FPG) BOUND TO 5,6-DIHYDROURACIL (DHU) CONTAINING DNA organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DG(B1):DC(C24) DT(B2):DA(C23) DA(B3):DT(C22) DG(B4):DC(C21) DA(B5):DT(C20) DC(B6):DG(C19) DC(B7):UMP(C18) DT(B8):DA(C17) DG(B9):DC(C16) DG(B10):DC(C15) DA(B11):DT(C14) DC(B12):DG(C13) chainA ( 2) GLN3 0 0 0 0 0 0 4 0 0 0 0 0 ( 5) GLU6 0 0 0 0 0 0 8 0 0 0 0 0 ( 75) ARG76 0 0 0 0 0 24 0 0 0 0 0 0 ( 76) MET77 0 0 0 0 0 16 0 0 0 0 0 0 ( 77) GLU78 0 0 0 0 0 0 0 1 0 0 0 0 (111) ARG112 0 0 0 0 0 2 15 36 0 0 0 0 (113) PHE114 0 0 0 0 0 72 11 0 0 0 0 0 (174) ILE175 0 0 0 0 0 0 4 0 0 0 0 0 (221) VAL222 0 0 0 0 0 0 6 0 0 0 0 0 (222) ARG223 0 0 0 0 0 0 4 0 0 0 0 0 (224) TYR225 0 0 0 0 0 0 5 0 0 0 0 0 (263) ARG264 0 0 0 0 1 6 0 0 0 0 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMEgryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldqtvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkggstvrtyvntqgeagtfqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >1r49_A:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes;Eukaryotic_DNA_topoisomerase_I,_dispensable_insert_domain; title=HUMAN TOPOISOMERASE I (TOPO70) DOUBLE MUTANT K532R/Y723F organism=Homo sapiens DNA sequence DA(B2):DT(C121) DA(B3):DT(C120) DA(B4):DT(C119) DA(B5):DT(C118) DG(B6):DC(C117) DA(B7):DT(C116) DC(B8):DG(C115) DT(B9):DA(C114) DT(B10):DA(C113) DA(B11):DT(C112) DG(B12):DC(C111) DA(B13):DT(C110) DA(B14):DT(C109) DA(B15):DT(C108) DA(B16):DT(C107) DA(B17):DT(C106) DT(B18):DA(C105) DT(B19):DA(C104) DT(B20):DA(C103) DT(B21):DA(C102) DT(B22):DA(C101) chainA (163) ARG364 0 0 0 0 0 0 0 0 2 2 12 0 0 0 0 0 0 0 0 0 0 (224) TYR426 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) MET428 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) ASN491 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) LYS493 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) ARG532 0 0 0 0 0 0 1 10 9 0 0 0 0 0 0 0 0 0 0 0 0 (505) ASN722 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kwkwweeerypegikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkerianfkieppglfrgRgnhpkmgmlkrrimpediiincsdakvpspppghkwkevrhdnkvtwlvswteniqgsikYiMlnpssrikgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNeKeegetadtvgccslrvehinlhpeldgqeyvvefdflgRdsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynranravailcnhqmmnlqtkidakkeqladarrdlksakadakvmkdaktkkvveskkkavqrleeqlmklevqatdreenkqsklNfldpritvawckkwgvpiekiynktqrekfawaidmadedyef >1r4i_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ANDROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO A DIRECT REPEAT RESPONSE ELEMENT organism=Rattus norvegicus DNA sequence DC(C1):DG(D36) DC(C2):DG(D35) DA(C3):DT(D34) DG(C4):DC(D33) DA(C5):DT(D32) DA(C6):DT(D31) DC(C7):DG(D30) DA(C8):DT(D29) DT(C9):DA(D28) DC(C10):DG(D27) DA(C11):DT(D26) DA(C12):DT(D25) DG(C13):DC(D24) DA(C14):DT(D23) DA(C15):DT(D22) DC(C16):DG(D21) DA(C17):DT(D20) DG(C18):DC(D19) chainA ( 26) LYS563 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) VAL564 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG568 0 0 0 0 0 0 7 17 0 0 0 0 0 0 0 0 0 0 prot.sequence pqktclicgdeasgahygaltcgscKVffkRaaegkqkylcasrndctidkfrrkncpscrlrkcyeagmtlga >1r4i_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ANDROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO A DIRECT REPEAT RESPONSE ELEMENT organism=Rattus norvegicus DNA sequence DC(C1):DG(D36) DC(C2):DG(D35) DA(C3):DT(D34) DG(C4):DC(D33) DA(C5):DT(D32) DA(C6):DT(D31) DC(C7):DG(D30) DA(C8):DT(D29) DT(C9):DA(D28) DC(C10):DG(D27) DA(C11):DT(D26) DA(C12):DT(D25) DG(C13):DC(D24) DA(C14):DT(D23) DA(C15):DT(D22) DC(C16):DG(D21) DA(C17):DT(D20) DG(C18):DC(D19) chainA ( 26) LYS563 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) VAL564 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG568 0 0 0 0 0 0 7 17 0 0 0 0 0 0 0 0 0 0 chainB ( 14) HIS553 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 24) LYS563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 5 0 ( 25) VAL564 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 28) LYS567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 29) ARG568 0 0 0 0 0 0 0 0 0 0 0 6 10 2 0 0 0 0 prot.sequence pqktclicgdeasgahygaltcgscKVffkRaaegkqkylcasrndctidkfrrkncpscrlrkcyeagmtlga/ktclicgdeasgaHygaltcgscKVffKRaaegkqkylcasrndctidkfrrkncpscrlrkcyeagmtlg >1r4o_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNA organism=Rattus norvegicus DNA sequence DC(C2):DG(D19) DA(C3):DT(D18) DG(C4):DC(D17) DA(C5):DT(D16) DA(C6):DT(D15) DC(C7):DG(D14) DA(C8):DT(D13) DT(C9):DA(D12) DC(C10):DG(D11) DG(C11):DC(D10) DA(C12):DT(D9) DT(C13):DA(D8) DG(C14):DC(D7) DT(C15):DA(D6) DT(C16):DA(D5) DC(C17):DG(D4) DT(C18):DA(D3) DG(C19):DC(D2) chainA ( 28) LYS461 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) VAL462 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG466 0 0 0 0 1 14 15 0 0 0 0 0 0 0 0 0 0 0 ( 78) LYS511 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 28) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 29) VAL462 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 33) ARG466 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 prot.sequence mkparpclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearKtk/mkparpclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktk >1r4o_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNA organism=Rattus norvegicus DNA sequence DC(C2):DG(D19) DA(C3):DT(D18) DG(C4):DC(D17) DA(C5):DT(D16) DA(C6):DT(D15) DC(C7):DG(D14) DA(C8):DT(D13) DT(C9):DA(D12) DC(C10):DG(D11) DG(C11):DC(D10) DA(C12):DT(D9) DT(C13):DA(D8) DG(C14):DC(D7) DT(C15):DA(D6) DT(C16):DA(D5) DC(C17):DG(D4) DT(C18):DA(D3) DG(C19):DC(D2) chainB ( 28) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 29) VAL462 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 33) ARG466 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 prot.sequence mkparpclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktk >1r4r_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNA organism=Rattus norvegicus DNA sequence DC(C2):DG(D19) DA(C3):DT(D18) DG(C4):DC(D17) DA(C5):DT(D16) DA(C6):DT(D15) DC(C7):DG(D14) DA(C8):DT(D13) DT(C9):DA(D12) DG(C10):DC(D11) DA(C11):DT(D10) DT(C12):DA(D9) DG(C13):DC(D8) DT(C14):DA(D7) DT(C15):DA(D6) DC(C16):DG(D5) DT(C17):DA(D4) DC(C18):DG(D3) DA(C19):DT(D2) chainA ( 24) LYS461 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL462 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS465 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG466 0 0 0 0 3 8 18 0 0 0 0 0 0 0 0 0 0 0 chainB ( 18) HIS451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 28) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 ( 29) VAL462 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 ( 33) ARG466 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 prot.sequence rpclvcsdeasgchygvltcgscKVffKRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear/mkparpclvcsdeasgcHygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear >1r4r_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNA organism=Rattus norvegicus DNA sequence DT(D2):DA(C19) DG(D3):DC(C18) DA(D4):DT(C17) DG(D5):DC(C16) DA(D6):DT(C15) DA(D7):DT(C14) DC(D8):DG(C13) DA(D9):DT(C12) DT(D10):DA(C11) DC(D11):DG(C10) DA(D12):DT(C9) DT(D13):DA(C8) DG(D14):DC(C7) DT(D15):DA(C6) DT(D16):DA(C5) DC(D17):DG(C4) DT(D18):DA(C3) DG(D19):DC(C2) chainB ( 18) HIS451 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS461 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) VAL462 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG466 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 prot.sequence mkparpclvcsdeasgcHygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear >1r71_AB:KorB_DNA-binding_domain-like; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF KORB IN COMPLEX WITH THE OPERATOR DNA organism=Escherichia coli DNA sequence DC(F1):DG(E17) BRU(F2):DA(E16) DT(F3):DA(E15) DT(F4):DA(E14) DT(F5):DA(E13) DA(F6):DT(E12) DG(F7):DC(E11) DC(F8):DG(E10) DC(F9):DG(E9) DG(F10):DC(E8) DC(F11):DG(E7) DT(F12):DA(E6) DA(F13):DT(E5) DA(F14):DT(E4) DA(F15):DT(E3) DA(F16):BRU(E2) BRU(F17):DA(E1) chainA ( 43) SER181 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 44) PRO182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 ( 45) ALA183 0 0 0 0 0 0 0 0 0 0 0 4 2 4 0 0 0 ( 46) PHE184 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 48) THR186 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 ( 49) GLN187 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 ( 71) ASP209 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 73) THR211 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (102) ARG240 0 0 0 0 0 0 0 0 12 9 6 0 0 0 0 0 0 chainB ( 45) SER181 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 46) PRO182 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ALA183 0 0 0 4 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 48) PHE184 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 50) THR186 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN187 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 ( 73) ASP209 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 75) THR211 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (104) ARG240 0 0 0 0 0 0 6 10 15 0 0 0 0 0 0 0 0 prot.sequence eadqvienlqrneltpreiadfigrelakgkkkgdiakeigkSPAFiTQhvtlldlpekiadafntgrvrDvTvvnElvtafkkrpeeveawldddtqeitRgtvkllreflde/yneadqvienlqrneltpreiadfigrelakgkkkgdiakeigkSPAFiTQhvtlldlpekiadafntgrvrDvTvvnElvtafkkrpeeveawldddtqeitRgtvkllreflde >1r71_B:KorB_DNA-binding_domain-like; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF KORB IN COMPLEX WITH THE OPERATOR DNA organism=Escherichia coli DNA sequence DC(F1):DG(E17) BRU(F2):DA(E16) DT(F3):DA(E15) DT(F4):DA(E14) DT(F5):DA(E13) DA(F6):DT(E12) DG(F7):DC(E11) DC(F8):DG(E10) DC(F9):DG(E9) DG(F10):DC(E8) DC(F11):DG(E7) DT(F12):DA(E6) DA(F13):DT(E5) DA(F14):DT(E4) DA(F15):DT(E3) DA(F16):BRU(E2) BRU(F17):DA(E1) chainB ( 45) SER181 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 46) PRO182 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ALA183 0 0 0 4 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 48) PHE184 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 50) THR186 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN187 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 ( 73) ASP209 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 75) THR211 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (104) ARG240 0 0 0 0 0 0 6 10 15 0 0 0 0 0 0 0 0 prot.sequence yneadqvienlqrneltpreiadfigrelakgkkkgdiakeigkSPAFiTQhvtlldlpekiadafntgrvrDvTvvnElvtafkkrpeeveawldddtqeitRgtvkllreflde >1r71_CD:KorB_DNA-binding_domain-like; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF KORB IN COMPLEX WITH THE OPERATOR DNA organism=Escherichia coli DNA sequence DA(G1):BRU(H17) BRU(G2):DA(H16) DT(G3):DA(H15) DT(G4):DA(H14) DT(G5):DA(H13) DA(G6):DT(H12) DG(G7):DC(H11) DC(G8):DG(H10) DG(G9):DC(H9) DG(G10):DC(H8) DC(G11):DG(H7) DT(G12):DA(H6) DA(G13):DT(H5) DA(G14):DT(H4) DA(G15):DT(H3) DA(G16):BRU(H2) DG(G17):DC(H1) chainC ( 42) SER181 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 43) PRO182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 ( 44) ALA183 0 0 0 0 0 0 0 0 0 0 0 4 2 4 0 0 0 ( 45) PHE184 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 47) THR186 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 ( 48) GLN187 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 ( 70) ASP209 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 72) THR211 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 (101) ARG240 0 0 0 0 0 0 0 0 16 8 5 0 0 0 0 0 0 chainD ( 44) SER181 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 45) PRO182 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ALA183 0 0 0 3 1 3 0 0 0 0 0 0 0 0 0 0 0 ( 49) THR186 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) GLN187 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 ( 72) ASP209 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 74) THR211 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (103) ARG240 0 0 0 0 0 0 6 11 13 0 0 0 0 0 0 0 0 prot.sequence adqvienlqrneltpreiadfigrelakgkkkgdiakeigkSPAFiTQhvtlldlpekiadafntgrvrDvTvvnElvtafkkrpeeveawldddtqeitRgtvkllrefld/neadqvienlqrneltpreiadfigrelakgkkkgdiakeigkSPAfiTQhvtlldlpekiadafntgrvrDvTvvnElvtafkkrpeeveawldddtqeitRgtvkllreflde >1r7m_B:Homing_endonucleases; title=THE HOMING ENDONUCLEASE I-SCEI BOUND TO ITS DNA RECOGNITION REGION organism=Saccharomyces cerevisiae DNA sequence DG(F2):DC(E25) DT(F3):DA(E24) DA(F4):DT(E23) DT(F5):DA(E22) DT(F6):DA(E21) DA(F7):DT(E20) DC(F8):DG(E19) DC(F9):DG(E18) DC(F10):DG(E17) DT(F11):DA(E16) DG(F12):DC(E15) DT(F13):DA(E14) DT(F14):DA(E13) DA(F15):DT(E12) DT(F16):DA(E11) DC(F17):DG(E10) DC(F18):DG(E9) DC(F19):DG(E8) DT(F20):DA(E7) DA(F21):DT(E6) DG(F22):DC(E5) DC(F23):DG(E4) DG(F24):DC(E3) DT(F25):DA(E2) chainB ( 12) PRO314 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ASN315 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TYR346 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG348 0 0 0 0 0 0 0 11 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG350 0 0 0 0 0 1 10 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) GLN359 0 0 0 0 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLU361 0 0 0 0 0 0 0 0 0 1 8 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) LYS386 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG388 0 0 0 0 0 0 0 0 0 22 13 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) VAL396 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (100) GLN402 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ASP450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (149) TYR451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 1 0 0 0 0 0 (150) ASN452 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 7 0 0 0 (161) ASN463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (163) GLN465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (190) ASN492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 5 1 0 0 0 0 0 0 (191) LYS493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 7 0 0 0 0 0 0 0 prot.sequence nikknqvmnlgPNskllkeyksqlielnieqfeagiglilgdaYiRsRdegktycmQfEwknkaymdhvcllydqwvlspphkKeRvnhlgnlVitwgaQtfkhqafnklanlfivnnkktipnnlvenyltpmslaywfmddggkwDYNknstnksivlNtQsftfeeveylvkglrnkfqlncyvkiNKnkpiiyidsmsylifynlikpylipqmmyklp >1r8d_AB:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MTAN BOUND TO DNA organism=Bacillus subtilis DNA sequence DG(C-12):DC(D12) DA(C-11):DT(D11) DC(C-10):DG(D10) DC(C-9):DG(D9) DC(C-8):DG(D8) DT(C-7):DA(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DC(C-4):DG(D4) DG(C-3):DC(D3) DT(C-2):DA(D2) DT(C1):DA(D1) DG(C2):DC(D-2) DC(C3):DG(D-3) DG(C4):DC(D-4) DT(C5):DA(D-5) DG(C6):DC(D-6) DA(C7):DT(D-7) DT(C8):DA(D-8) DT(C9):DA(D-9) DG(C10):DC(D-10) DT(C11):DA(D-11) DT(C12):DA(D-12) chainA ( 17) ARG17 0 0 0 0 0 0 0 16 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) HIS20 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) HIS21 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) TYR38 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 17) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 14 0 0 0 0 0 0 0 ( 20) HIS20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 21) HIS21 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 ( 38) TYR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 prot.sequence mkyqvkqvaeisgvsiRtlHHydniellnpsaltdagYrlysdadlerlqqilffkeigfrldeikemldhpnfdrkaalqsqkeilmkkkqrmdemiqtidrtllsvd/mkyqvkqvaeisgvsiRtlHHydniellnpsaltdagYrlysdadlerlqqilffkeigfrldeikemldhpnfdrkaalqsqkeilmkkkqrmdemiqtidrtlls >1r8d_B:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MTAN BOUND TO DNA organism=Bacillus subtilis DNA sequence DA(D-12):DT(C12) DA(D-11):DT(C11) DC(D-10):DG(C10) DA(D-9):DT(C9) DA(D-8):DT(C8) DT(D-7):DA(C7) DC(D-6):DG(C6) DA(D-5):DT(C5) DC(D-4):DG(C4) DG(D-3):DC(C3) DC(D-2):DG(C2) DA(D1):DT(C1) DA(D2):DT(C-2) DC(D3):DG(C-3) DG(D4):DC(C-4) DT(D5):DA(C-5) DT(D6):DA(C-6) DA(D7):DT(C-7) DG(D8):DC(C-8) DG(D9):DC(C-9) DG(D10):DC(C-10) DT(D11):DA(C-11) DC(D12):DG(C-12) chainB ( 17) ARG17 0 0 0 0 0 0 0 14 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) HIS20 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) HIS21 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) TYR38 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkyqvkqvaeisgvsiRtlHHydniellnpsaltdagYrlysdadlerlqqilffkeigfrldeikemldhpnfdrkaalqsqkeilmkkkqrmdemiqtidrtlls >1r8e_A:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BMRR BOUND TO DNA AT 2.4A RESOLUTION organism=Bacillus subtilis DNA sequence DG(B-12) DA(B-11) DC(B-10) DC(B-9) DC(B-8) DT(B-7) DC(B-6) DC(B-5) DC(B-4) DC(B-3) DT(B-2) DT(B1) DA(B2) DG(B3) DG(B4) DG(B5) DG(B6) DA(B7) DG(B8) DG(B9) DG(B10) DT(B11) DC(B12) chainA ( 18) LYS20 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG23 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR42 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esyysigevsklanvsiKalRyydkidlfkpayvdpdtsYryytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaegigpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkiria >1r9s_AB: title=RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MATCHED NUCLEOTIDE organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T1) DC(T2) DG(T3) DA(T4) DT(T5) DC(T6) DC(T7) DT(T8) DC(T9) DT(T10) DC(T11) DG(T12) DA(T13) DT(T14) chainA (316) ARG350 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (413) GLN447 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (414) PRO448 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (797) THR831 0 0 0 13 0 0 0 0 0 0 0 0 0 0 (798) ALA832 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (1322) ARG1386 6 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpseddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqapvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldRkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgagvsqvlnrytysstlshlrrtntpiakpRQlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedvIIgkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >1ram_AB:p53-like_transcription_factors;E_set_domains; title=A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER organism=Mus musculus DNA sequence DC(C1):DG(D20) DG(C2):DC(D19) DG(C3):DC(D18) DC(C4):DG(D17) DT(C5):DA(D16) DG(C6):DC(D15) DG(C7):DC(D14) DA(C8):DT(D13) DA(C9):DT(D12) DA(C10):DT(D11) DT(C11):DA(D10) DT(C12):DA(D9) DT(C13):DA(D8) DC(C14):DG(D7) DC(C15):DG(D6) DA(C16):DT(D5) DG(C17):DC(D4) DC(C18):DG(D3) DC(C19):DG(D2) DG(C20):DC(D1) chainA ( 15) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 4 13 7 0 0 0 0 0 ( 17) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 9 0 0 0 0 ( 18) TYR36 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 0 (169) ARG187 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 (200) LYS218 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB ( 18) TYR36 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (169) ARG187 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence pyveiieqpkqrgmRfRYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdKvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/pyveiieqpkqrgmrfrYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd >1ram_B:p53-like_transcription_factors;E_set_domains; title=A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER organism=Mus musculus DNA sequence DC(C1):DG(D20) DG(C2):DC(D19) DG(C3):DC(D18) DC(C4):DG(D17) DT(C5):DA(D16) DG(C6):DC(D15) DG(C7):DC(D14) DA(C8):DT(D13) DA(C9):DT(D12) DA(C10):DT(D11) DT(C11):DA(D10) DT(C12):DA(D9) DT(C13):DA(D8) DC(C14):DG(D7) DC(C15):DG(D6) DA(C16):DT(D5) DG(C17):DC(D4) DC(C18):DG(D3) DC(C19):DG(D2) DG(C20):DC(D1) chainB ( 18) TYR36 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (169) ARG187 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence pyveiieqpkqrgmrfrYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd >1rcs_A:TrpR-like; title=NMR STUDY OF TRP REPRESSOR-OPERATOR DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DC(F1):DG(E20) DG(F2):DC(E19) DT(F3):DA(E18) DA(F4):DT(E17) DC(F5):DG(E16) DT(F6):DA(E15) DA(F7):DT(E14) DG(F8):DC(E13) DT(F9):DA(E12) DT(F10):DA(E11) DA(F11):DT(E10) DA(F12):DT(E9) DC(F13):DG(E8) DT(F14):DA(E7) DA(F15):DT(E6) DG(F16):DC(E5) DT(F17):DA(E4) DA(F18):DT(E3) DC(F19):DG(E2) DG(F20):DC(E1) chainA ( 65) GLN68 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG69 0 11 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) LYS72 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ILE79 0 0 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ALA80 0 0 0 0 2 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) THR81 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR83 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG84 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qspysaamaeqrhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelKnelgagIATiTRgsnslkaapvelrqwleevllks >1rcs_AB:TrpR-like; title=NMR STUDY OF TRP REPRESSOR-OPERATOR DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DC(E1):DG(F20) DG(E2):DC(F19) DT(E3):DA(F18) DA(E4):DT(F17) DC(E5):DG(F16) DT(E6):DA(F15) DA(E7):DT(F14) DG(E8):DC(F13) DT(E9):DA(F12) DT(E10):DA(F11) DA(E11):DT(F10) DA(E12):DT(F9) DC(E13):DG(F8) DT(E14):DA(F7) DA(E15):DT(F6) DG(E16):DC(F5) DT(E17):DA(F4) DA(E18):DT(F3) DC(E19):DG(F2) DG(E20):DC(F1) chainA ( 65) GLN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 66) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 0 ( 69) LYS72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 76) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 0 0 0 ( 77) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 2 0 0 0 0 ( 78) THR81 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 80) THR83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 81) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 chainB ( 65) GLN568 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG569 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) LYS572 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ILE579 0 0 0 6 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ALA580 0 0 0 0 2 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) THR581 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR583 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG584 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qspysaamaeqrhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelKnelgagIATiTRgsnslkaapvelrqwleevllks/qspysaamaeqrhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelKnelgagIATiTRgsnslkaapvelrqwleevllks >1rep_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF REPLICATION INITIATOR PROTEIN REPE54 OF MINI-F PLASMID COMPLEXED WITH AN ITERON DNA organism=Escherichia coli DNA sequence DC(B23):DG(A21) DT(B24):DA(A20) DG(B25):DC(A19) DA(B26):DT(A18) DG(B27):DC(A17) DG(B28):DC(A16) DG(B29):DC(A15) DC(B30):DG(A14) DA(B31):DT(A13) DA(B32):DT(A12) DT(B33):DA(A11) DT(B34):DA(A10) DT(B35):DA(A9) DG(B36):DC(A8) DT(B37):DA(A7) DC(B38):DG(A6) DA(B39):DT(A5) DC(B40):DG(A4) DA(B41):DT(A3) DG(B42):DC(A2) DG(B43):DC(A1) chainC ( 55) SER75 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ALA76 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) GLU77 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) SER79 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS80 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG83 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG124 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (166) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 (168) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 12 4 0 0 (170) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 (171) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 2 0 0 0 0 (174) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 12 0 0 0 0 (175) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 13 18 5 0 0 0 0 0 0 (201) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence sprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyesfpwfikpahspsRglysvhinpylipffiglqnrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdit >1rh6_AB:Putative_DNA-binding_domain; title=BACTERIOPHAGE LAMBDA EXCISIONASE (XIS)-DNA COMPLEX organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DC(D16):DG(C15) DA(D17):DT(C14) DA(D18):DT(C13) DC(D19):DG(C12) DA(D20):DT(C11) DG(D21):DC(C10) DA(D22):DT(C9) DC(D23):DG(C8) DT(D24):DA(C7) DA(D25):DT(C6) DC(D26):DG(C5) DA(D27):DT(C4) DT(D28):DA(C3) DA(D29):DT(C2) chainA chainB ( 19) GLU19 0 0 0 0 0 0 0 6 4 2 0 0 0 0 ( 20) THR20 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 22) ARG22 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 23) ARG23 0 0 0 0 0 0 0 0 4 6 12 4 0 0 ( 26) ARG26 0 0 0 0 0 0 3 6 0 0 0 0 0 0 ( 39) ARG39 0 1 6 9 0 0 0 0 0 0 0 0 0 0 prot.sequence myltlqewnarqrrprsletvrrwvresrifpppvkdgreylfhesavkvdlnrp/myltlqewnarqrrprslETvRRwvResrifpppvkdgReylfhesavkvdl >1rh6_B:Putative_DNA-binding_domain; title=BACTERIOPHAGE LAMBDA EXCISIONASE (XIS)-DNA COMPLEX organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DT(C2):DA(D29) DA(C3):DT(D28) DT(C4):DA(D27) DG(C5):DC(D26) DT(C6):DA(D25) DA(C7):DT(D24) DG(C8):DC(D23) DT(C9):DA(D22) DC(C10):DG(D21) DT(C11):DA(D20) DG(C12):DC(D19) DT(C13):DA(D18) DT(C14):DA(D17) DG(C15):DC(D16) chainB ( 19) GLU19 0 0 0 0 2 4 6 0 0 0 0 0 0 0 ( 20) THR20 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 23) ARG23 0 0 4 12 6 4 0 0 0 0 0 0 0 0 ( 26) ARG26 0 0 0 0 0 0 6 3 0 0 0 0 0 0 ( 39) ARG39 0 0 0 0 0 0 0 0 0 0 9 6 1 0 prot.sequence myltlqewnarqrrprslETvRRwvResrifpppvkdgReylfhesavkvdl >1rio_A:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF BACTERIOPHAGE LAMBDA CI-NTD IN COMPLEX WITH SIGMA- REGION4 OF THERMUS AQUATICUS BOUND TO DNA organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DC(U1):DG(T27) DG(U2):DC(T26) DG(U3):DC(T25) DT(U4):DA(T24) DA(U5):DT(T23) DT(U6):DA(T22) DC(U7):DG(T21) DA(U8):DT(T20) DC(U9):DG(T19) DC(U10):DG(T18) DG(U11):DC(T17) DC(U12):DG(T16) DC(U13):DG(T15) DA(U14):DT(T14) DG(U15):DC(T13) DT(U16):DA(T12) DG(U17):DC(T11) DC(U18):DG(T10) DT(U19):DA(T9) DT(U20):DA(T8) DG(U21):DC(T7) DA(U22):DT(T6) DC(U23):DG(T5) DA(U24):DT(T4) DT(U25):DA(T3) DG(U26):DC(T2) DG(U27):DC(T1) chainA ( 3) LYS4 0 0 0 0 0 0 0 0 0 14 13 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) LYS5 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN45 0 0 0 11 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) SER46 0 0 0 0 0 1 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ASN56 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stKKkpltqeqledarrlkaiyekkknelglsqesvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavhhhhhh >1rio_ABH:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF BACTERIOPHAGE LAMBDA CI-NTD IN COMPLEX WITH SIGMA- REGION4 OF THERMUS AQUATICUS BOUND TO DNA organism=THERMUS AQUATICUS / ENTEROBACTERIA PHAGE LAMBDA DNA sequence DC(U1):DG(T27) DG(U2):DC(T26) DG(U3):DC(T25) DT(U4):DA(T24) DA(U5):DT(T23) DT(U6):DA(T22) DC(U7):DG(T21) DA(U8):DT(T20) DC(U9):DG(T19) DC(U10):DG(T18) DG(U11):DC(T17) DC(U12):DG(T16) DC(U13):DG(T15) DA(U14):DT(T14) DG(U15):DC(T13) DT(U16):DA(T12) DG(U17):DC(T11) DC(U18):DG(T10) DT(U19):DA(T9) DT(U20):DA(T8) DG(U21):DC(T7) DA(U22):DT(T6) DC(U23):DG(T5) DA(U24):DT(T4) DT(U25):DA(T3) DG(U26):DC(T2) DG(U27):DC(T1) chainH ( 43) THR408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 ( 44) ARG409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 7 0 0 0 ( 45) GLU410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 11 4 0 0 0 0 0 ( 46) ARG411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 48) ARG413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 ( 49) GLN414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 chainA ( 3) LYS4 0 0 0 0 0 0 0 0 0 14 13 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) LYS5 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN45 0 0 0 11 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) SER46 0 0 0 0 0 1 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ASN56 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 4) LYS5 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 8 0 0 0 0 0 0 0 ( 45) SER46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 5 0 0 0 0 0 0 0 0 0 ( 55) ASN56 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stKKkpltqeqledarrlkaiyekkknelglsqesvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavhhhhhh/stkKkpltqeqledarrlkaiyekkknelglsqesvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavhhhhh/seelekalsklsereamvlklrkglidgrehtleevgayfgvTRERiRQienkalrklkyh >1rm1_A:TATA-box_binding_protein-like; title=STRUCTURE OF A YEAST TFIIA/TBP/TATA-BOX DNA COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(E19):DG(D18) DG(E20):DC(D17) DT(E21):DA(D16) DT(E22):DA(D15) DT(E23):DA(D14) DT(E24):DA(D13) DA(E25):DT(D12) DT(E26):DA(D11) DA(E27):DT(D10) DT(E28):DA(D9) DC(E29):DG(D8) DG(E30):DC(D7) DA(E31):DT(D6) DT(E32):DA(D5) DC(E33):DG(D4) DG(E34):DC(D3) DA(E35):DT(D2) DT(E36):DA(D1) chainA ( 9) ASN69 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 25 11 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm >1rm1_AC:TATA-box_binding_protein-like;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain; title=STRUCTURE OF A YEAST TFIIA/TBP/TATA-BOX DNA COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(E19):DG(D18) DG(E20):DC(D17) DT(E21):DA(D16) DT(E22):DA(D15) DT(E23):DA(D14) DT(E24):DA(D13) DA(E25):DT(D12) DT(E26):DA(D11) DA(E27):DT(D10) DT(E28):DA(D9) DC(E29):DG(D8) DG(E30):DC(D7) DA(E31):DT(D6) DT(E32):DA(D5) DC(E33):DG(D4) DG(E34):DC(D3) DA(E35):DT(D2) DT(E36):DA(D1) chainA ( 9) ASN69 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 25 11 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 chainC prot.sequence sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm/snaeasrvYeIivesvvnevredfenagideqtlqdlkNiwqkkltetkvttfSwDnqfndYlIsedgpdenlmlclydkvtrtkarwkcslkdgvvtInRndytfqkaqveaewv >1rpe_LR:lambda_repressor-like_DNA-binding_domains; title=THE PHAGE 434 OR2/R1-69 COMPLEX AT 2.5 ANGSTROMS RESOLUTION organism=PHAGE 434 DNA sequence DC(A22):DG(B20) DA(A23):DT(B19) DA(A24):DT(B18) DA(A25):DT(B17) DC(A26):DG(B16) DA(A27):DT(B15) DA(A28):DT(B14) DG(A29):DC(B13) DA(A30):DT(B12) DT(A31):DA(B11) DA(A32):DT(B10) DC(A33):DG(B9) DA(A34):DT(B8) DT(A35):DA(B7) DT(A36):DA(B6) DG(A37):DC(B5) DT(A38):DA(B4) DA(A39):DT(B3) DT(A40):DA(B2) chainL ( 17) GLN17 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) THR27 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLN28 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 4 7 13 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER30 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) GLU32 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) GLN33 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG43 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 chainR ( 27) THR27 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 ( 28) GLN28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 ( 29) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 2 18 7 4 0 0 ( 30) SER30 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 32) GLU32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 ( 33) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 prot.sequence sissrvkskriqlglnQaelaqkvgtTQQSiEQlengKtkrpRflpelasalgvsvdwllngt/sissrvkskriqlglnqaelaqkvgtTQQSiEQlengktkrprflpelasalgvsvdwllngt >1rpe_R:lambda_repressor-like_DNA-binding_domains; title=THE PHAGE 434 OR2/R1-69 COMPLEX AT 2.5 ANGSTROMS RESOLUTION organism=? DNA sequence DC(A22):DG(B20) DA(A23):DT(B19) DA(A24):DT(B18) DA(A25):DT(B17) DC(A26):DG(B16) DA(A27):DT(B15) DA(A28):DT(B14) DG(A29):DC(B13) DA(A30):DT(B12) DT(A31):DA(B11) DA(A32):DT(B10) DC(A33):DG(B9) DA(A34):DT(B8) DT(A35):DA(B7) DT(A36):DA(B6) DG(A37):DC(B5) DT(A38):DA(B4) DA(A39):DT(B3) DT(A40):DA(B2) chainR ( 27) THR27 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 ( 28) GLN28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 ( 29) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 2 18 7 4 0 0 ( 30) SER30 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 32) GLU32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 ( 33) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 prot.sequence sissrvkskriqlglnqaelaqkvgtTQQSiEQlengktkrprflpelasalgvsvdwllngt >1rr8_C:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes; title=STRUCTURAL MECHANISMS OF CAMPTOTHECIN RESISTANCE BY MUTATIONS IN HUMAN TOPOISOMERASE I organism=Homo sapiens DNA sequence DA(A1):DT(B122) DA(A2):DT(B121) DA(A3):DT(B120) DA(A4):DT(B119) DA(A5):DT(B118) DG(A6):DC(B117) DA(A7):DT(B116) DC(A8):DG(B115) DT(A9):DA(B114) DT(A10):DA(B113) DG(A11):DC(B112) DG(A12):DC(B111) DA(A13):DT(B110) DA(A14):DT(B109) DA(A15):DT(B108) DA(A16):DT(B107) DA(A17):DT(B106) DT(A18):DA(B105) DT(A19):DA(B104) DT(A20):DA(B103) DT(A21):DA(B102) DT(A22):DA(B101) chainC (156) GLU356 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (164) ARG364 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 (225) LYS425 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 (226) TYR426 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) MET428 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) LYS436 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) ASN491 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) LYS532 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 (451) ASN722 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aawkwweeerypegikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkerianfkiEppglsrgRgnhpkmgmlkrrimpediiincskdakvpspppghkwkevrhdnkvtwlvswteniqgsiKYiMlnpssriKgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNekeegetadtvgccslrvehinlhpeldgqeyvvefdflgKdsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynranravailcnhqqapreenkqialgtsklNldpritvawckkwgvpiekiynktqrekfawaidmadedyef >1rrj_A:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes;Eukaryotic_DNA_topoisomerase_I,_dispensable_insert_domain; title=STRUCTURAL MECHANISMS OF CAMPTOTHECIN RESISTANCE BY MUTATIONS IN HUMAN TOPOISOMERASE I organism=Homo sapiens DNA sequence DA(C101):DT(B22) DA(C102):DT(B21) DA(C103):DT(B20) DA(C104):DT(B19) DA(C105):DT(B18) DT(C106):DA(B17) DT(C107):DA(B16) DT(C108):DA(B15) DT(C109):DA(B14) DT(C110):DA(B13) DC(C111):DG(B12) DC(C112):DG(B11) DA(C113):DT(B10) DA(C114):DT(B9) DG(C115):DC(B8) DT(C116):DA(B7) DC(C117):DG(B6) DT(C118):DA(B5) DT(C119):DA(B4) DT(C120):DA(B3) DT(C121):DA(B2) DT(C122):DA(B1) chainA (156) GLU356 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 (164) ARG364 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 (225) LYS425 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (226) TYR426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 (228) MET428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (236) LYS436 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (291) ASN491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 (332) LYS532 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 (440) PHE640 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qkwkwweeerypegikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkerianfkiEppglfrgRgnhpkmgmlkrrimpediiincskdakvpspppghkwkevrhdnkvtwlvswteniqgsiKYiMlnpssriKgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNekeegetadtvgccslrvehinlhpeldgqeyvvefdflgKdsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynranravailcnhqrappktFeksmmnlqtkidakkeqladarrdlksakadakvmkdaktkkvveskkkavqrleeqlmklevqatdreenkqialgtsklsldpritvawckkwgvpiekiynktqrekfawaidmadedyef >1rrq_A:Nudix;DNA-glycosylase; title=MUTY ADENINE GLYCOSYLASE IN COMPLEX WITH DNA CONTAINING AN A:OXOG PAIR organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DG(C13):DC(B11) DT(C14):DA(B10) DC(C15):DG(B9) DC(C16):DG(B8) DA(C17):DT(B7) DA(C18):8OG(B6) DG(C19):DC(B5) DT(C20):DA(B4) DC(C21):DG(B3) DT(C22):DA(B2) chainA ( 18) ARG26 0 0 0 0 0 5 0 0 0 0 ( 20) LEU28 0 0 0 0 0 1 0 0 0 0 ( 22) TRP30 0 0 0 0 0 2 0 0 0 0 ( 23) ARG31 0 0 0 0 0 2 0 0 0 0 ( 35) GLU43 0 0 0 0 0 7 0 0 0 0 ( 38) LEU46 0 0 0 0 0 10 0 0 0 0 ( 40) GLN48 0 0 0 0 12 4 19 0 0 0 ( 41) THR49 0 0 0 0 0 5 0 0 0 0 ( 42) ARG50 0 0 2 11 28 0 0 0 0 0 ( 43) VAL51 0 0 0 0 0 4 0 0 0 0 ( 80) TYR88 0 0 0 0 0 39 33 0 0 0 ( 83) ARG91 0 0 0 0 0 1 0 0 0 0 (118) TYR126 0 0 0 0 0 3 0 0 0 0 (136) ASN144 0 0 0 0 0 1 0 0 0 0 (156) CYS164 0 0 0 0 0 0 0 0 0 3 (183) ILE191 0 0 0 0 0 10 0 0 0 0 (184) GLU192 0 0 0 0 0 2 0 0 0 0 (187) ALA195 0 0 0 0 0 2 0 0 0 0 (291) PHE307 0 0 0 0 0 3 0 0 0 0 (292) SER308 0 0 0 0 2 9 3 0 0 0 (293) HIS309 0 0 0 0 0 0 3 0 0 0 prot.sequence parefqrdlldwfarerRdLpWRkdrdpykvwvsEvmLQQtRVeTvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpYtvgavlslaygvpepavNgnvmrvlsrlflvtddiakCstrkrfeqivreimayenpgafnealIElgAlvctprrpscllcpvqaycqafaegvaeelpvkmvkqvplavavladdegrvlirkrdstgllanlwefpscetdgadgkekleqmvglqveltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >1rrs_A:DNA-glycosylase;Nudix; title=MUTY ADENINE GLYCOSYLASE IN COMPLEX WITH DNA CONTAINING AN ABASIC SITE organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DG(C13):DC(B11) DT(C14):DA(B10) DC(C15):DG(B9) DC(C16):DG(B8) DA(C17):DT(B7) HPD(C18):8OG(B6) DG(C19):DC(B5) DT(C20):DA(B4) DC(C21):DG(B3) DT(C22):DA(B2) chainA ( 40) GLN48 0 0 0 0 10 4 22 0 0 0 ( 41) THR49 0 0 0 0 0 4 0 0 0 0 ( 42) ARG50 0 0 0 0 2 0 0 0 0 0 ( 80) TYR88 0 0 0 0 0 39 35 0 0 0 ( 83) ARG91 0 0 0 0 0 2 0 0 0 0 (292) PHE307 0 0 0 0 0 3 0 0 0 0 (293) SER308 0 0 0 0 2 9 4 0 0 0 (294) HIS309 0 0 0 0 0 0 4 0 0 0 prot.sequence parefqrdlldwfarerrdlpwrkdrdpykvwvsevmlQQtRvetvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavngnvmrvlsrlflvtddiakpstrkrfeqivreimayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkvkqvplavavladdegrvlirkrdstgllanlwefpscetdgadgkekleqmvglqveltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >1rtd_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF A CATALYTIC COMPLEX OF HIV-1 REVERSE TRANSCRIPTASE: IMPLICATIONS FOR NUCLEOSIDE ANALOG DRUG RESISTANCE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DC(F2):DG(E26) DA(F3):DT(E25) DG(F4):DC(E24) DT(F5):DA(E23) DC(F6):DG(E22) DC(F7):DG(E21) DC(F8):DG(E20) DT(F9):DA(E19) DG(F10):DC(E18) DT(F11):DA(E17) DT(F12):DA(E16) DC(F13):DG(E15) DG(F14):DC(E14) DA(F15):DT(E13) DG(F16):DC(E12) DC(F17):DG(E11) DG(F18):DC(E10) DC(F19):DG(E9) DC(F20):DG(E8) DG(F21):DC(E7) DG(F22):DC(E6) TTP(A700):DA(E5) chainA ( 61) PHE61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 65) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 ( 74) LEU74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 (110) ASP110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (113) ASP113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (114) ALA114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (115) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 (151) GLN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (157) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 (184) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (185) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (258) CYS258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (448) ARG448 0 0 2 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence kispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiCklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltdttnQktqlqaiylalqdsglevnivtdsqyalgiiqaqpdeseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaIkkkdstkwrklvDfrelnkrtqdfwevqlgipHpaglkkkksvtvldvgdayfSvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaIfqssmtkilepfrkqnpdiviyqymDDlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypGikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >1rtd_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF A CATALYTIC COMPLEX OF HIV-1 REVERSE TRANSCRIPTASE: IMPLICATIONS FOR NUCLEOSIDE ANALOG DRUG RESISTANCE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DC(H2):DG(G26) DA(H3):DT(G25) DG(H4):DC(G24) DT(H5):DA(G23) DC(H6):DG(G22) DC(H7):DG(G21) DC(H8):DG(G20) DT(H9):DA(G19) DG(H10):DC(G18) DT(H11):DA(G17) DT(H12):DA(G16) DC(H13):DG(G15) DG(H14):DC(G14) DA(H15):DT(G13) DG(H16):DC(G12) DC(H17):DG(G11) DG(H18):DC(G10) DC(H19):DG(G9) DC(H20):DG(G8) DG(H21):DC(G7) DG(H22):DC(G6) TTP(C705):DA(G5) chainC ( 61) PHE61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 65) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 ( 74) LEU74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 (110) ASP110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (113) ASP113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (114) ALA114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (115) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 (116) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (151) GLN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (157) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 (184) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (185) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (258) CYS258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (448) ARG448 0 0 2 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence kispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiCklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltdttnQktqlqaiylalqdsglevnivtdsqyalgiiqaqpdeseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaIkkkdstkwrklvDfrelnkrtqdfwevqlgipHpaglkkkksvtvldvgdayfSvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaIfqssmtkilepfrkqnpdiviyqymDDlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypGikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >1run_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'- CYCLIC-MONOPHOSPHATE organism=Escherichia coli DNA sequence DC(C-4):DG(F-4) DG(C-3):DC(F-3) DA(C-2):DT(F-2) DA(C-1):DT(F-1) DA(C1):DT(F1) DA(C2):DT(F2) DA(C3):DT(F3) DT(C4):DA(F4) DG(C5):DC(F5) DT(C6):DA(F6) DG(C7):DC(F7) DA(C8):DT(F8) DT(C9):DA(F9) chainA (171) SER179 0 0 0 0 0 0 0 0 0 0 0 1 1 (172) ARG180 0 0 0 0 0 0 0 10 16 2 0 0 0 (173) GLU181 0 0 0 0 0 0 0 0 1 6 6 9 0 (177) ARG185 0 0 0 0 0 0 0 0 0 8 14 6 0 prot.sequence ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcSREtvgRilkmledqnlisahgktivvygtr >1ruo_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CATABOLITE GENE ACTIVATOR PROTEIN (CAP) MUTANT/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE organism=Escherichia coli DNA sequence DC(C-4):DG(F-4) DG(C-3):DC(F-3) DA(C-2):DT(F-2) DA(C-1):DT(F-1) DA(C1):DT(F1) DA(C2):DT(F2) DA(C3):DT(F3) DT(C4):DA(F4) DG(C5):DC(F5) DT(C6):DA(F6) DG(C7):DC(F7) DA(C8):DT(F8) DT(C9):DA(F9) chainA (162) GLN170 0 0 0 0 0 0 0 1 0 0 0 0 0 (171) SER179 0 0 0 0 0 0 0 0 0 0 0 1 0 (172) ARG180 0 0 0 0 0 0 0 9 13 1 0 0 0 (173) PHE181 0 0 0 0 0 0 0 0 9 19 20 8 0 (174) THR182 0 0 0 0 0 0 0 0 0 0 0 0 1 (177) ARG185 0 0 0 0 0 0 0 0 0 1 8 8 2 prot.sequence ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcSRFTvgRilkmledqnlisahgktivvy >1rv5_A:Restriction_endonuclease-like; title=COMPLEX OF ECORV ENDONUCLEASE WITH D(AAAGAT)/D(ATCTT) organism=ESCHERICHIA COLI DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) DT(D6):DA(C7) DA(D7):DT(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) DT(D11):DA(C2) chainA ( 69) ASN70 0 0 0 0 0 0 1 0 0 0 (103) LYS104 0 2 0 0 0 0 0 0 0 0 (105) THR106 0 0 0 9 0 0 0 0 0 0 (178) SER183 0 0 4 5 0 0 0 0 0 0 (180) ASN185 0 0 16 12 0 0 0 0 0 0 (181) THR186 0 0 0 5 6 3 0 0 0 0 (183) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvsslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1rv5_AB:Restriction_endonuclease-like; title=COMPLEX OF ECORV ENDONUCLEASE WITH D(AAAGAT)/D(ATCTT) organism=ESCHERICHIA COLI DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) DT(D6):DA(C7) DA(D7):DT(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) DT(D11):DA(C2) chainA ( 69) ASN70 0 0 0 0 0 0 1 0 0 0 (103) LYS104 0 2 0 0 0 0 0 0 0 0 (105) THR106 0 0 0 9 0 0 0 0 0 0 (178) SER183 0 0 4 5 0 0 0 0 0 0 (180) ASN185 0 0 16 12 0 0 0 0 0 0 (181) THR186 0 0 0 5 6 3 0 0 0 0 (183) ASN188 0 0 0 4 0 0 0 0 0 0 chainB ( 62) ASN70 0 0 4 7 1 0 0 0 0 0 ( 94) THR106 0 0 0 0 0 0 9 1 0 0 (165) SER183 0 0 0 0 0 0 5 4 0 0 (167) ASN185 0 0 0 0 0 0 10 19 0 0 (168) THR186 0 0 0 0 5 4 5 0 0 0 (170) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvsslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinaldvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkikfTlggytsfirnntknivypfdqyiahwiigyvytrvlktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1rva_AB:Restriction_endonuclease-like; title=MG2+ BINDING TO THE ACTIVE SITE OF ECO RV ENDONUCLEASE: A CRYSTALLOGRAPHIC STUDY OF COMPLEXES WITH SUBSTRATE AND PRODUCT DNA AT 2 ANGSTROMS RESOLUTION organism=Escherichia coli DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainA ( 69) ASN70 0 0 3 4 3 0 0 0 0 0 (103) LYS104 0 0 0 0 0 0 0 0 1 0 (105) THR106 0 0 0 0 0 0 9 0 0 0 (182) SER183 0 0 0 0 0 0 6 3 0 0 (184) ASN185 0 0 0 0 0 0 10 17 0 0 (185) THR186 0 0 0 0 5 3 9 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 chainB ( 37) LYS38 0 0 0 0 0 3 0 0 0 0 ( 69) ASN70 0 0 0 0 0 1 4 4 0 0 (105) THR106 0 0 0 9 0 0 0 0 0 0 (182) SER183 0 0 2 7 0 0 0 0 0 0 (184) ASN185 0 0 18 11 0 0 0 0 0 0 (185) THR186 0 0 0 9 3 5 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtKvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1rva_B:Restriction_endonuclease-like; title=MG2+ BINDING TO THE ACTIVE SITE OF ECO RV ENDONUCLEASE: A CRYSTALLOGRAPHIC STUDY OF COMPLEXES WITH SUBSTRATE AND PRODUCT DNA AT 2 ANGSTROMS RESOLUTION organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) DT(D6):DA(C7) DA(D7):DT(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) DT(D11):DA(C2) chainB ( 37) LYS38 0 0 0 0 3 0 0 0 0 0 ( 69) ASN70 0 0 4 4 1 0 0 0 0 0 (105) THR106 0 0 0 0 0 0 9 0 0 0 (182) SER183 0 0 0 0 0 0 7 2 0 0 (184) ASN185 0 0 0 0 0 0 11 18 0 0 (185) THR186 0 0 0 0 5 3 9 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtKvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1rvb_A:Restriction_endonuclease-like; title=MG2+ BINDING TO THE ACTIVE SITE OF ECO RV ENDONUCLEASE: A CRYSTALLOGRAPHIC STUDY OF COMPLEXES WITH SUBSTRATE AND PRODUCT DNA AT 2 ANGSTROMS RESOLUTION organism=Escherichia coli DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainA ( 69) ASN70 0 0 5 7 3 0 0 0 0 0 (103) LYS104 0 0 0 0 0 0 0 0 1 0 (105) THR106 0 0 0 0 0 0 9 1 0 0 (182) SER183 0 0 0 0 0 0 6 4 0 0 (184) ASN185 0 0 0 0 0 0 10 17 0 0 (185) THR186 0 0 0 0 5 4 9 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1rvb_AB:Restriction_endonuclease-like; title=MG2+ BINDING TO THE ACTIVE SITE OF ECO RV ENDONUCLEASE: A CRYSTALLOGRAPHIC STUDY OF COMPLEXES WITH SUBSTRATE AND PRODUCT DNA AT 2 ANGSTROMS RESOLUTION organism=Escherichia coli DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainA ( 69) ASN70 0 0 5 7 3 0 0 0 0 0 (103) LYS104 0 0 0 0 0 0 0 0 1 0 (105) THR106 0 0 0 0 0 0 9 1 0 0 (182) SER183 0 0 0 0 0 0 6 4 0 0 (184) ASN185 0 0 0 0 0 0 10 17 0 0 (185) THR186 0 0 0 0 5 4 9 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 chainB ( 69) ASN70 0 0 0 0 0 1 4 4 0 0 (105) THR106 0 0 1 10 0 0 0 0 0 0 (182) SER183 0 0 4 6 0 0 0 0 0 0 (184) ASN185 0 0 18 10 0 0 0 0 0 0 (185) THR186 0 0 0 9 3 5 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1rvc_A:Restriction_endonuclease-like; title=MG2+ BINDING TO THE ACTIVE SITE OF ECO RV ENDONUCLEASE: A CRYSTALLOGRAPHIC STUDY OF COMPLEXES WITH SUBSTRATE AND PRODUCT DNA AT 2 ANGSTROMS RESOLUTION organism=Escherichia coli DNA sequence DA(E2):DT(D11) DA(E3):DT(D10) DG(E4):DC(D9) DA(E5):DT(D8) DT(E6):DA(D7) DA(F7):DT(C6) DT(F8):DA(C5) DC(F9):DG(C4) DT(F10):DA(C3) DT(F11):DA(C2) chainA (103) LYS104 0 1 0 0 0 0 0 0 0 0 (105) THR106 0 0 1 9 0 0 0 0 0 0 (182) SER183 0 0 4 5 0 0 0 0 0 0 (184) ASN185 0 0 16 10 0 0 0 0 0 0 (185) THR186 0 0 0 8 4 5 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqnhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1rvc_AB:Restriction_endonuclease-like; title=MG2+ BINDING TO THE ACTIVE SITE OF ECO RV ENDONUCLEASE: A CRYSTALLOGRAPHIC STUDY OF COMPLEXES WITH SUBSTRATE AND PRODUCT DNA AT 2 ANGSTROMS RESOLUTION organism=Escherichia coli DNA sequence DA(C2):DT(F11) DA(C3):DT(F10) DG(C4):DC(F9) DA(C5):DT(F8) DT(C6):DA(F7) DA(D7):DT(E6) DT(D8):DA(E5) DC(D9):DG(E4) DT(D10):DA(E3) DT(D11):DA(E2) chainA (103) LYS104 0 0 0 0 0 0 0 0 1 0 (105) THR106 0 0 0 0 0 0 9 1 0 0 (182) SER183 0 0 0 0 0 0 5 4 0 0 (184) ASN185 0 0 0 0 0 0 10 16 0 0 (185) THR186 0 0 0 0 5 4 8 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 chainB ( 69) ASN70 0 0 0 0 0 0 6 4 0 0 (103) LYS104 0 2 0 0 0 0 0 0 0 0 (105) THR106 0 0 1 9 0 0 0 0 0 0 (182) SER183 0 0 4 5 0 0 0 0 0 0 (184) ASN185 0 0 18 12 0 0 0 0 0 0 (185) THR186 0 0 0 8 2 5 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqnhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1rxw_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF A. FULGIDUS FEN-1 BOUND TO DNA organism=Archaeoglobus fulgidus DNA sequence DA(C8):DT(B9) DG(C7):DC(B10) DC(C6):DG(B11) DA(C5):DT(B12) DT(C4):DA(B13) DC(C3):DG(B14) DG(C2):DC(B15) chainA ( 36) ILE38 0 0 0 0 0 0 3 ( 37) ILE39 0 0 0 0 0 0 16 ( 45) LEU47 0 0 0 0 0 0 15 ( 57) SER59 0 0 0 0 0 0 1 (295) ARG314 0 0 0 0 0 2 0 prot.sequence adigdlfereeveleyfsgkkiavdafntlyqfisIIrqpdgtpLkdsqgritshlSgilyrvsnmvevgirpvfvfdgeppefkkaeieerkkrraeaeemwiaalqagdkdakkyaqaagrvdeyivdsaktllsymgipfvdapsegeaqaaymaakgdveytgsqdydsllfgsprlarnlaidvkpeiiilesnlkrlgltreqlidiailvgtdynegvkgvgvkkalnyiktygdifralkalkvveeirnfflnppvtddyriefrepdfekaieflceehdfsreRvekaleklka >1ryr_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION organism=Sulfolobus solfataricus DNA sequence DT(C1905):ATP(A1814) DG(C1906):DC(B1813) DA(C1907):DT(B1812) DA(C1908):DT(B1811) DT(C1909):DA(B1810) DC(C1910):DG(B1809) DC(C1911):DG(B1808) DT(C1912):DA(B1807) DT(C1913):DA(B1806) DC(C1914):DG(B1805) DC(C1915):DG(B1804) DC(C1916):DG(B1803) DC(C1917):DG(B1802) DC(C1918):DG(B1801) chainA ( 7) ASP7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) TYR10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) PHE11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR45 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG51 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP105 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) LYS159 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) SER244 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 0 4 2 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfsKfi >1rys_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION organism=Sulfolobus solfataricus DNA sequence DT(F1904):ATP(B1815) DT(F1905):DA(E1814) DG(F1906):DC(E1813) DA(F1907):DT(E1812) DA(F1908):DT(E1811) DT(F1909):DA(E1810) DC(F1910):DG(E1809) DC(F1911):DG(E1808) DT(F1912):DA(E1807) DT(F1913):DA(E1806) DC(F1914):DG(E1805) DC(F1915):DG(E1804) DC(F1916):DG(E1803) DC(F1917):DG(E1802) chainB ( 7) ASP7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) TYR10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) PHE11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL32 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR45 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) TYR48 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG51 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP105 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) LYS159 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) ILE295 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (332) ARG332 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldIvsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >1rz9_ABCDE:Origin_of_replication-binding_domain,_RBD-like; title=CRYSTAL STRUCTURE OF AAV REP COMPLEXED WITH THE REP-BINDING SEQUENCE organism=Adeno-associated virus - 5 DNA sequence DC(F1):DG(G26) DG(F2):DC(G25) DC(F3):DG(G24) DG(F4):DC(G23) DT(F5):DA(G22) DT(F6):DA(G21) DC(F7):DG(G20) DG(F8):DC(G19) DC(F9):DG(G18) DT(F10):DA(G17) DC(F11):DG(G16) DG(F12):DC(G15) DC(F13):DG(G14) DT(F14):DA(G13) DC(F15):DG(G12) DG(F16):DC(G11) DC(F17):DG(G10) DT(F18):DA(G9) DG(F19):DC(G8) DG(F20):DC(G7) DC(F21):DG(G6) DT(F22):DA(G5) DC(F23):DG(G4) DG(F24):DC(G3) DT(F25):DA(G2) DG(F26):DC(G1) chainA (102) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 (106) ARG106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 6 0 0 (137) LYS137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 3 0 0 0 0 0 0 0 0 0 (138) LYS138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainB (102) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 (106) ARG106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 7 0 0 0 0 0 0 (137) LYS137 0 0 0 0 0 0 0 0 0 0 3 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS138 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (102) MET102 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (106) ARG106 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 2 0 0 0 0 0 0 0 0 0 0 (137) LYS137 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS138 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (102) MET102 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ARG106 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) LYS137 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS138 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (102) MET102 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ARG106 0 0 0 0 0 2 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) LYS137 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence matfyevivrvpfdveehlpgisdsfvdwvtgqiwelppesdlnltlveqpqltvadrirrvflyewnkfskqeskffvqfekgseyfhlhtlvetsgissMvlgRyvsqiraqlvkvvfqgiepqindwvaitkvKKggankvvdsgyipayllpkvqpelqwawtnldeyklaalnleerkrlvaqflaes/matfyevivrvpfdveehlpgisdsfvdwvtgqiwelppesdlnltlveqpqltvadrirrvflyewnkfskqeskffvqfekgseyfhlhtlvetsgissMvlgRyvsqiraqlvkvvfqgiepqindwvaitkvKKggankvvdsgyipayllpkvqpelqwawtnldeyklaalnleerkrlvaqflaes/matfyevivrvpfdveehlpgisdsfvdwvtgqiwelppesdlnltlveqpqltvadrirrvflyewnkfskqeskffvqfekgseyfhlhtlvetsgissMvlgRyvsqiraqlvkvvfqgiepqindwvaitkvKKggankvvdsgyipayllpkvqpelqwawtnldeyklaalnleerkrlvaqflaes/matfyevivrvpfdveehlpgisdsfvdwvtgqiwelppesdlnltlveqpqltvadrirrvflyewnkfskqeskffvqfekgseyfhlhtlvetsgissMvlgRyvsqiraqlvkvvfqgiepqindwvaitkvKKggankvvdsgyipayllpkvqpelqwawtnldeyklaalnleerkrlvaqflaes/matfyevivrvpfdveehlpgisdsfvdwvtgqiwelppesdlnltlveqpqltvadrirrvflyewnkfskqeskffvqfekgseyfhlhtlvetsgissMvlgRyvsqiraqlvkvvfqgiepqindwvaitkvKkggankvvdsgyipayllpkvqpelqwawtnldeyklaalnleerkrlvaqflaes >1rz9_B:Origin_of_replication-binding_domain,_RBD-like; title=CRYSTAL STRUCTURE OF AAV REP COMPLEXED WITH THE REP-BINDING SEQUENCE organism=Adeno-associated virus - 5 DNA sequence DC(G1):DG(F26) DA(G2):DT(F25) DC(G3):DG(F24) DG(G4):DC(F23) DA(G5):DT(F22) DG(G6):DC(F21) DC(G7):DG(F20) DC(G8):DG(F19) DA(G9):DT(F18) DG(G10):DC(F17) DC(G11):DG(F16) DG(G12):DC(F15) DA(G13):DT(F14) DG(G14):DC(F13) DC(G15):DG(F12) DG(G16):DC(F11) DA(G17):DT(F10) DG(G18):DC(F9) DC(G19):DG(F8) DG(G20):DC(F7) DA(G21):DT(F6) DA(G22):DT(F5) DC(G23):DG(F4) DG(G24):DC(F3) DC(G25):DG(F2) DG(G26):DC(F1) chainB (102) MET102 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ARG106 0 0 0 0 0 0 7 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) LYS137 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 3 0 0 0 0 0 0 0 0 0 0 (138) LYS138 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence matfyevivrvpfdveehlpgisdsfvdwvtgqiwelppesdlnltlveqpqltvadrirrvflyewnkfskqeskffvqfekgseyfhlhtlvetsgissMvlgRyvsqiraqlvkvvfqgiepqindwvaitkvKKggankvvdsgyipayllpkvqpelqwawtnldeyklaalnleerkrlvaqflaes >1rzr_AD: title=CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR-PHOSPHOPROTEIN-DNA COMPLEX organism=BACILLUS MEGATERIUM DNA sequence DC(B700):DG(E715) DT(B701):DA(E714) DG(B702):DC(E713) DT(B703):DA(E712) DT(B704):DA(E711) DA(B705):DT(E710) DG(B706):DC(E709) DC(B707):DG(E708) DG(B708):DC(E707) DC(B709):DG(E706) DT(B710):DA(E705) DT(B711):DA(E704) DT(B712):DA(E703) DC(B713):DG(E702) DA(B714):DT(E701) DG(B715):DC(E700) chainA ( 5) ILE5 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 15) SER15 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 16) MET16 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 ( 17) ALA17 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 ( 20) SER20 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 21) ARG21 0 0 0 0 0 0 0 0 0 0 0 1 5 12 14 0 ( 52) ALA52 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 55) LEU55 0 0 0 0 0 0 0 3 12 0 0 0 0 0 0 0 ( 56) ALA56 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 chainD ( 5) ILE5 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 15) SER15 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET16 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 ( 17) ALA17 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER20 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 21) ARG21 0 16 14 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA52 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 55) LEU55 0 0 0 0 0 0 0 12 4 0 0 0 0 0 0 0 ( 56) ALA56 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 prot.sequence mnvtIydvareasvSMAtvSRvvngnpnvkpstrkkvletierlgyrpnavArgLAskktttvgviipdisnifyaelargiediatmykyniilsnsdqnqdkelhllnnmlgkqvdgiifmsgnvteehveelkkspvpvvlaasiestnqipsvtidyeqaafdavqslidsghkniafvsgtleepinhakkvkgykraltesglpvrdsyivegdytydsgieaveklleedekptaifvgtdemalgvihgaqdrglnvpndleiigfdntrlstmvrpqltsvvqpmydigavamrlltkymnketvdssivqlphriefrqstk/mnvtIydvareasvSMAtvSRvvngnpnvkpstrkkvletierlgyrpnavArgLAskktttvgviipdisnifyaelargiediatmykyniilsnsdqnqdkelhllnnmlgkqvdgiifmsgnvteehveelkkspvpvvlaasiestnqipsvtidyeqaafdavqslidsghkniafvsgtleepinhakkvkgykraltesglpvrdsyivegdytydsgieaveklleedekptaifvgtdemalgvihgaqdrglnvpndleiigfdntrlstmvrpqltsvvqpmydigavamrlltkymnketvdssivqlphriefrqstk >1rzr_CG: title=CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR-PHOSPHOPROTEIN-DNA COMPLEX organism=BACILLUS MEGATERIUM DNA sequence DC(H700):DG(R715) DT(H701):DA(R714) DG(H702):DC(R713) DA(H703):DT(R712) DA(H704):DT(R711) DA(H705):DT(R710) DG(H706):DC(R709) DC(H707):DG(R708) DG(H708):DC(R707) DC(H709):DG(R706) DT(H710):DA(R705) DA(H711):DT(R704) DA(H712):DT(R703) DC(H713):DG(R702) DA(H714):DT(R701) DG(H715):DC(R700) chainG ( 5) ILE5 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 15) SER15 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET16 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 ( 17) ALA17 0 0 2 3 3 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER20 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 21) ARG21 0 19 9 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA52 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 55) LEU55 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 ( 56) ALA56 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 chainC ( 5) ILE5 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 15) SER15 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 16) MET16 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 ( 17) ALA17 0 0 0 0 0 0 0 0 0 0 0 1 5 3 0 0 ( 18) THR18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 20) SER20 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 21) ARG21 0 0 0 0 0 0 0 0 0 0 0 0 0 9 33 0 ( 29) VAL29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 52) ALA52 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 55) LEU55 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 ( 56) ALA56 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 prot.sequence mnvtIydvareasvSMATvSRvvngnpnVkpstrkkvletierlgyrpnavArgLAskktttvgviipdisnifyaelargiediatmykyniilsnsdqnqdkelhllnnmlgkqvdgiifmsgnvteehveelkkspvpvvlaasiestnqipsvtidyeqaafdavqslidsghkniafvsgtleepinhakkvkgykraltesglpvrdsyivegdytydsgieaveklleedekptaifvgtdemalgvihgaqdrglnvpndleiigfdntrlstmvrpqltsvvqpmydigavamrlltkymnketvdssivqlphriefrqstk/mnvtIydvareasvSMAtvSRvvngnpnvkpstrkkvletierlgyrpnavArgLAskktttvgviipdisnifyaelargiediatmykyniilsnsdqnqdkelhllnnmlgkqvdgiifmsgnvteehveelkkspvpvvlaasiestnqipsvtidyeqaafdavqslidsghkniafvsgtleepinhakkvkgykraltesglpvrdsyivegdytydsgieaveklleedekptaifvgtdemalgvihgaqdrglnvpndleiigfdntrlstmvrpqltsvvqpmydigavamrlltkymnketvdssivqlphriefrqstk >1rzr_D:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR-PHOSPHOPROTEIN-DNA COMPLEX organism=? DNA sequence DC(E700):DG(B715) DT(E701):DA(B714) DG(E702):DC(B713) DA(E703):DT(B712) DA(E704):DT(B711) DA(E705):DT(B710) DG(E706):DC(B709) DC(E707):DG(B708) DG(E708):DC(B707) DC(E709):DG(B706) DT(E710):DA(B705) DA(E711):DT(B704) DA(E712):DT(B703) DC(E713):DG(B702) DA(E714):DT(B701) DG(E715):DC(B700) chainD ( 5) ILE5 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 15) SER15 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 16) MET16 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 ( 17) ALA17 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 ( 20) SER20 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 21) ARG21 0 0 0 0 0 0 0 0 0 0 0 0 1 14 16 0 ( 52) ALA52 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 55) LEU55 0 0 0 0 0 0 0 4 12 0 0 0 0 0 0 0 ( 56) ALA56 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 prot.sequence mnvtIydvareasvSMAtvSRvvngnpnvkpstrkkvletierlgyrpnavArgLAskktttvgviipdisnifyaelargiediatmykyniilsnsdqnqdkelhllnnmlgkqvdgiifmsgnvteehveelkkspvpvvlaasiestnqipsvtidyeqaafdavqslidsghkniafvsgtleepinhakkvkgykraltesglpvrdsyivegdytydsgieaveklleedekptaifvgtdemalgvihgaqdrglnvpndleiigfdntrlstmvrpqltsvvqpmydigavamrlltkymnketvdssivqlphriefrqstk >1rzt_E:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF DNA POLYMERASE LAMBDA COMPLEXED WITH A TWO NUCLEOTIDE GAP DNA MOLECULE organism=Homo sapiens DNA sequence DG(H1):DC(F4) DC(H2):DG(F3) DC(H3):DG(F2) DG(H4):DC(F1) DC(J1):DG(L4) DG(J2):DC(L3) DG(J3):DC(L2) DC(J4):DG(L1) chainE ( 25) TRP274 43 0 0 0 0 0 0 0 ( 26) ARG275 9 0 0 0 0 0 0 0 ( 28) LEU277 2 0 0 0 0 0 0 0 prot.sequence tnhnlhiteklevlakaysvqgdkWRaLgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >1rzt_EI:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;DNA_polymerase_beta-like,_second_domain;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF DNA POLYMERASE LAMBDA COMPLEXED WITH A TWO NUCLEOTIDE GAP DNA MOLECULE organism=Homo sapiens DNA sequence DG(H1):DC(F4) DC(H2):DG(F3) DC(H3):DG(F2) DG(H4):DC(F1) DC(J1):DG(L4) DG(J2):DC(L3) DG(J3):DC(L2) DC(J4):DG(L1) chainE ( 25) TRP274 43 0 0 0 0 0 0 0 ( 26) ARG275 9 0 0 0 0 0 0 0 ( 28) LEU277 2 0 0 0 0 0 0 0 chainI ( 25) TRP274 0 0 0 0 0 0 0 45 ( 26) ARG275 0 0 0 0 0 0 0 11 ( 28) LEU277 0 0 0 0 0 0 0 2 prot.sequence tnhnlhiteklevlakaysvqgdkWRaLgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw/tnhnlhiteklevlakaysvqgdkWRaLgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >1s0m_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF A BENZO[A]PYRENE DIOL EPOXIDE ADDUCT IN A TERNARY COMPLEX WITH A DNA POLYMERASE organism=Sulfolobus solfataricus DNA sequence DA(F1906):DT(E1813) DA(F1907):DT(E1812) DA(F1908):DT(E1811) DT(F1909):DA(E1810) DC(F1910):DG(E1809) DC(F1911):DG(E1808) DT(F1912):DA(E1807) DT(F1913):DA(E1806) DC(F1914):DG(E1805) DC(F1915):DG(E1804) DC(F1916):DG(E1803) DC(F1917):DG(E1802) DC(F1918):DG(E1801) chainB (244) SER244 0 0 0 1 0 0 0 0 0 0 0 0 0 (332) ARG332 7 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 2 1 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >1s0n_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=SNAPSHOTS OF REPLICATION THROUGH AN ABASIC LESION: STRUCTURAL BASIS FOR BASE SUBSTITUTION AND FRAMESHIFT organism=Sulfolobus solfataricus DNA sequence DC(T6):DG(P13) DG(T7):DC(P12) DT(T8):DA(P11) DG(T9):DC(P10) DA(T10):DT(P9) DT(T11):DA(P8) DC(T12):DG(P7) DA(T13):DT(P6) DG(T14):DC(P5) DT(T15):DA(P4) DG(T16):DC(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA (332) ARG332 2 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >1s0o_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=SNAPSHOTS OF REPLICATION THROUGH AN ABASIC LESION: STRUCTURAL BASIS FOR BASE SUBSTITUTION AND FRAMESHIFT organism=Sulfolobus solfataricus DNA sequence DG(E1801):DC(F1918) DG(E1802):DC(F1917) DG(E1803):DC(F1916) DG(E1804):DC(F1915) DG(E1805):DC(F1914) DA(E1806):DT(F1913) DA(E1807):DT(F1912) DG(E1808):DC(F1911) DG(E1809):DC(F1910) DA(E1810):DT(F1909) DC(E1811):DG(F1908) DT(E1812):DA(F1907) DC(E1813):DG(F1905) TTP(B804):DA(F1904) chainB ( 7) ASP7 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 9) ASP9 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 10) TYR10 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 11) PHE11 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 12) TYR12 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 44) ALA44 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 45) THR45 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 48) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 51) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 76) MET76 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (105) ASP105 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (106) GLU106 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (159) LYS159 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (332) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (336) ARG336 0 0 0 0 0 0 0 0 0 5 10 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvAtanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >1s0v_A:DNA/RNA_polymerases; title=STRUCTURAL BASIS FOR SUBSTRATE SELECTION BY T7 RNA POLYMERASE organism=ENTEROBACTERIA PHAGE T7 DNA sequence DG(G1):DT(E10) DT(G2):DA(E9) DC(G3):DG(E8) DG(G4):DC(E7) DA(G5):DT(E6) DT(G6):DA(E5) DT(G7):DA(E4) DC(G8):DG(E3) DC(G9):DG(E2) chainA (622) TYR639 1 0 0 0 0 0 0 0 0 (627) PHE644 3 50 0 0 0 0 0 0 0 (632) GLN649 11 0 0 0 0 0 0 0 0 prot.sequence ntiniakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmferqlkagevadnaaakplittllpkmiarindwfeevkakrgkrptafqflqeikpeavayitikttlacltsadnttvqavasaigraiedearfgrirdleakhfkknveeqlnkrvghvykkafmqvveadmlskgllggeawsswhkedsihvgvrciemliestgmvslhrqnagvvgqdsetielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiealtawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvtvtdentgeisekvklgtkalagqwlaygvtrsvtkrsvmtlaYgskeFgfRqQvleDtiqpaidsgkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtrlnlmflgqfrdseidahkqesgiapnfvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa >1s10_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=SNAPSHOTS OF REPLICATION THROUGH AN ABASIC LESION: STRUCTURAL BASIS FOR BASE SUBSTITUTION AND FRAMESHIFT organism=Sulfolobus solfataricus DNA sequence DT(C1906):DA(B1813) DA(C1907):DT(B1812) DG(C1908):DC(B1811) DT(C1909):DA(B1810) DC(C1910):DG(B1809) DC(C1911):DG(B1808) DT(C1912):DA(B1807) DT(C1913):DA(B1806) DC(C1914):DG(B1805) DC(C1915):DG(B1804) DC(C1916):DG(B1803) DC(C1917):DG(B1802) DC(C1918):DG(B1801) chainA (336) ARG336 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivSrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >1s32_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=MOLECULAR RECOGNITION OF THE NUCLEOSOMAL 'SUPERGROOVE' organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR441 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 5) ARG1226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG1230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 18) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 2) ARG1426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllRkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/dgkkRrktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/akrhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/kRrktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1s32_D:Histone-fold; title=MOLECULAR RECOGNITION OF THE NUCLEOSOMAL 'SUPERGROOVE' organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainD ( 5) ARG1226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG1230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dgkkRrktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1s40_A:Nucleic_acid-binding_proteins; title=SOLUTION STRUCTURE OF THE CDC13 DNA-BINDING DOMAIN COMPLEXED WITH A SINGLE-STRANDED TELOMERIC DNA 11-MER organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(B1) DT(B2) DG(B3) DT(B4) DG(B5) DG(B6) DG(B7) DT(B8) DG(B9) DT(B10) DG(B11) chainA ( 20) GLU24 3 0 0 0 0 0 0 0 0 0 0 ( 21) THR25 1 0 0 0 0 0 0 0 0 0 0 ( 23) TYR27 6 0 0 0 0 0 0 0 0 0 0 ( 34) SER38 0 0 0 0 0 8 0 0 0 0 0 ( 36) ASP40 0 0 0 0 0 1 0 0 0 0 0 ( 37) LYS41 0 0 0 0 0 25 0 0 0 0 0 ( 39) ALA43 0 0 0 3 0 0 0 0 0 0 0 ( 40) PHE44 0 0 0 2 0 0 0 0 0 0 0 ( 42) SER46 0 0 0 0 0 5 5 0 0 0 0 ( 44) VAL48 0 0 0 0 0 0 1 0 0 0 0 ( 56) ASN60 0 0 0 0 5 0 2 1 0 0 0 ( 57) TYR61 0 0 0 0 0 0 4 9 0 0 0 ( 58) LEU62 0 0 0 0 0 0 2 0 0 0 0 ( 59) TYR63 0 0 0 0 0 0 14 0 0 0 0 ( 66) TYR70 0 0 0 0 0 0 0 0 0 1 18 ( 77) LYS81 0 0 0 0 18 2 16 0 0 0 0 ( 81) TYR85 0 0 0 22 0 0 0 0 0 0 0 (107) ARG111 0 0 0 0 0 0 0 0 0 0 2 (108) ASP112 0 0 0 0 0 0 0 0 0 0 28 (110) ASN114 0 0 0 0 0 0 0 0 0 0 19 (123) LYS127 0 6 0 0 0 0 0 0 0 0 0 (127) TYR131 0 0 0 0 4 0 0 0 0 0 0 (132) ASN136 0 0 0 0 12 0 0 0 0 0 0 (133) ALA137 0 0 0 0 1 0 0 0 0 0 0 (136) ARG140 0 1 0 0 0 0 0 0 0 0 0 prot.sequence kmarkdptiefcqlgldtfETkYitmfgmlvscSfDKpAFiSfVfsdftkndivqNYLYdrylidYenklelnegfKaimYknqfetfdsklrkifnnglrdlqngRDeNlsqygivckmniKvkmYngklNAivRecepvphsqissiaspsqcehlrlfyqrafkrigesaisryfeeyrrffpi >1s6m_A:Origin_of_replication-binding_domain,_RBD-like; title=CONJUGATIVE RELAXASE TRWC IN COMPLEX WITH ORIT DNA. METAL-BOUND STRUCTURE organism=ESCHERICHIA COLI DNA sequence DG(B3):DC(B16) DC(B4):DG(B15) DA(B5):DT(B14) DC(B6):DG(B13) DC(B7):DG(B12) DG(B8):DA(B10) chainA ( 68) ALA73 0 0 0 5 2 0 ( 70) ARG75 0 3 10 4 0 0 ( 76) ARG81 1 0 0 0 0 0 (123) ARG128 6 13 10 0 0 0 (125) LYS130 0 0 0 7 0 0 prot.sequence mlshmvltrqdigraasyyedgaddydasewqgkgaeelglsgevdskrfrellagnigeghrimrSAtRqdskeRigldltfsapksvslqalvagdaeiikahdravartleqaearaqaRqKiqgktriettgnlvigkfrhetsrerdpqlhthavilnmtkrsdgqwralKndeivkatrylgavynaelahelqklgyqlrygkdgnfdlahidrqqiegfskrteqiaewyaargldpnsvsleqkqaakvlsrakktsvdrealraewqatakelgidfs >1s76_D:DNA/RNA_polymerases; title=T7 RNA POLYMERASE ALPHA BETA METHYLENE ATP ELONGATION COMPLEX organism=Enterobacteria phage T7 DNA sequence DT(N14):DG(T114) DT(N15):DC(T115) DT(N16):DC(T116) DA(N17):DG(T117) DC(N18):DC(T118) DG(N19):DT(T119) DT(N20):DT(T120) DT(N21):DA(T121) DG(N22):DC(T122) DC(N23):DG(T123) DG(N24):DC(T124) DC(N25):DG(T125) DA(N26):DT(T126) DC(N27):DG(T127) DG(N28):DC(T128) DG(N29):DC(T129) DC(N30):DG(T130) chainD (153) LYS164 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (157) GLU168 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 (161) LYS172 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) ARG173 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) VAL174 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) TYR178 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (343) ARG379 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 (349) TYR385 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) TYR427 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (578) ARG632 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 0 (582) THR636 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 (585) TYR639 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (587) SER641 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (590) PHE644 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 (593) ARG647 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 (595) GLN649 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (616) PRO670 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (617) ASN671 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 (726) PRO780 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (730) HIS784 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdielaaipfntladhygerlareqlalehesyemgearfrkmferqlkagevadnaaakplittllpkmiarindwfeevkakrgkrptafqflqeikpeavayitikttlacltsadnttvqavasaigraiedearfgrirdleakhfkKnveEqlnKRVghvYkkafmqvveadmlskgawsswhkedsihvgvrciemliestgmvslhrqsetielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiereelpmtawkRaaaavYrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvYavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnegtkalagqwlaygvtrsvtkRsvmTlaYgSkeFgfRqQvledtiqpaidsgkglmftqPNqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtrlnlmflgqfrlqptintnkdseidahkqesgiaPnfvHsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa >1s77_D:DNA/RNA_polymerases; title=T7 RNAP PRODUCT PYROPHOSPHATE ELONGATION COMPLEX organism=Enterobacteria phage T7 DNA sequence DT(N14):DG(T114) DT(N15):DC(T115) DT(N16):DC(T116) DA(N17):DG(T117) DC(N18):DC(T118) DG(N19):DT(T119) DT(N20):DT(T120) DT(N21):DA(T121) DG(N22):DC(T122) DC(N23):DG(T123) DG(N24):DC(T124) DC(N25):DG(T125) DA(N26):DT(T126) DC(N27):DG(T127) DG(N28):DC(T128) DG(N29):DC(T129) DC(N30):DG(T130) chainD (154) ASN165 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (157) GLU168 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 (161) LYS172 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) ARG173 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) TYR178 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) TYR385 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) TYR427 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (577) ARG632 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (581) THR636 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (584) TYR639 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (586) SER641 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (589) PHE644 0 0 0 0 0 0 7 25 0 0 0 0 0 0 0 0 0 (592) ARG647 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 (594) GLN649 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (614) GLN669 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (615) PRO670 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (616) ASN671 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 (725) PRO780 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (729) HIS784 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdielaaipfntladhygerlareqlalehesyemgearfrkmferqlkagevadnaaakplittllpkmiarindwfeevkakrgkrptafqflqeikpeavayitikttlacltsadnttvqavasaigraiedearfgrirdleakhfkkNveEqlnKRvghvYkkafmqvveadmlskgawsswhkedsihvgvrciemliestgmvslhsetielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiereelpwkraaaavYrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvYavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvklgtkalagqwlaygvtrsvtkRsvmTlaYgSkeFgfRqQvledtiqpaidsgkglmftQPNqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtrlnlmflgqfrlqptintnkdseidahkqesgiaPnfvHsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa >1s97_C:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 WITH GT MISMATCH organism=Sulfolobus solfataricus DNA sequence DG(G1):DC(K18) DG(G2):DC(K17) DG(G3):DC(K16) DG(G4):DC(K15) DG(G5):DC(K14) DA(G6):DT(K13) DA(G7):DT(K12) DG(G8):DC(K11) DG(G9):DC(K10) DA(G10):DT(K9) DC(G11):DG(K8) DT(G12):DA(K7) DG(G13):DT(K6) DCT(C602):DG(K5) chainC ( 7) ASP7 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 9) ASP9 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 10) TYR10 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 11) PHE11 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 44) ALA44 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 45) THR45 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 48) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 51) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (105) ASP105 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (106) GLU106 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (156) ASP156 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (159) LYS159 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (244) SER244 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (332) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (336) ARG336 0 0 0 0 0 0 0 0 0 1 5 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvAtanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >1s9f_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO WITH AT MATCHED organism=Sulfolobus solfataricus DNA sequence DT(I6):DA(E13) DA(I7):DT(E12) DG(I8):DC(E11) DT(I9):DA(E10) DC(I10):DG(E9) DC(I11):DG(E8) DT(I12):DA(E7) DT(I13):DA(E6) DC(I14):DG(E5) DC(I15):DG(E4) DC(I16):DG(E3) DC(I17):DG(E2) DC(I18):DG(E1) chainA (244) SER244 0 0 0 1 0 0 0 0 0 0 0 0 0 (332) ARG332 5 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 2 1 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrKevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >1s9k_CDE:p53-like_transcription_factors;E_set_domains;A_DNA-binding_domain_in_eukaryotic_transcription_factors;"Winged_helix"_DNA-binding_domain;Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF HUMAN NFAT1 AND FOS-JUN ON THE IL-2 ARRE1 SITE organism=HOMO SAPIENS DNA sequence DC(B5003):DG(A4020) DT(B5004):DA(A4019) DA(B5005):DT(A4018) DT(B5006):DA(A4017) DT(B5007):DA(A4016) DA(B5008):DT(A4015) DC(B5009):DG(A4014) DA(B5010):DT(A4013) DC(B5011):DG(A4012) DA(B5012):DT(A4011) DT(B5013):DA(A4010) DA(B5014):DT(A4009) DT(B5015):DA(A4008) DT(B5016):DA(A4007) DT(B5017):DA(A4006) DT(B5018):DA(A4005) DC(B5019):DG(A4004) DA(B5020):DT(A4003) chainC ( 23) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 6 ( 26) TYR424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 ( 29) GLU427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 ( 32) ARG430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (139) ARG537 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (173) GLN571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 5 0 (174) ARG572 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 chainD ( 4) ARG143 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ASN147 0 0 1 8 8 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ALA150 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ALA151 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG155 0 0 0 0 0 2 12 16 0 0 0 0 0 0 0 0 0 0 chainE ( 6) ASN272 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 ( 9) ALA275 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 13) CYS279 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 14) ARG280 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQRsahelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv/rriRrerNkmAAakcRnrrreltdtlqaetdqledeksalqteianllkekek/rkrmrNriAaskCRkrkleriarleekvktlkaqnselastanmlreqvaql >1s9k_E:Leucine_zipper_domain;A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NFAT1 AND FOS-JUN ON THE IL-2 ARRE1 SITE organism=HOMO SAPIENS DNA sequence DT(A4003):DA(B5020) DG(A4004):DC(B5019) DA(A4005):DT(B5018) DA(A4006):DT(B5017) DA(A4007):DT(B5016) DA(A4008):DT(B5015) DT(A4009):DA(B5014) DA(A4010):DT(B5013) DT(A4011):DA(B5012) DG(A4012):DC(B5011) DT(A4013):DA(B5010) DG(A4014):DC(B5009) DT(A4015):DA(B5008) DA(A4016):DT(B5007) DA(A4017):DT(B5006) DT(A4018):DA(B5005) DA(A4019):DT(B5004) DG(A4020):DC(B5003) chainE ( 6) ASN272 0 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 0 ( 9) ALA275 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 13) CYS279 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 14) ARG280 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 prot.sequence rkrmrNriAaskCRkrkleriarleekvktlkaqnselastanmlreqvaql >1sa3_A:Restriction_endonuclease-like; title=AN ASYMMETRIC COMPLEX OF RESTRICTION ENDONUCLEASE MSPI ON ITS PALINDROMIC DNA RECOGNITION SITE organism=MORAXELLA SP. DNA sequence DC(C1):DG(D20) DC(C2):DG(D19) DC(C3):DG(D18) DC(C4):DG(D17) DC(C5):DG(D16) DG(C6):DC(D15) DG(C7):DC(D14) DG(C8):DC(D13) DG(C9):DC(D12) DC(F12):DG(E9) DC(F13):DG(E8) DC(F14):DG(E7) DC(F15):DG(E6) DG(F16):DC(E5) DG(F17):DC(E4) DG(F18):DC(E3) DG(F19):DC(E2) DG(F20):DC(E1) chainA (127) SER127 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 (130) GLU130 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ASN246 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (248) THR248 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 (249) TYR249 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 (251) SER251 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 (253) SER253 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) GLN259 0 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 (261) LYS261 0 0 0 0 0 7 9 1 0 0 0 0 0 0 0 0 0 0 prot.sequence mrtellsklyddfgidqlphtqhgvtSDrlgklyekyildifkdieslkkyntnafpqekdisskllkalnldldniidvsssdtdlgrtiaggspktdatirftfhnqssrlvplnikhsskkkvSiaEydvetictgvgisdgelkelirkhqndqsaklftpvqkqrltellepyrerfirwcvtlraeksegnilhpdllirfqvidreyvdvtikniddyvsdriaegskarkpgfgtglNwTYaSgSkakkmQfKg >1sa3_AB: title=AN ASYMMETRIC COMPLEX OF RESTRICTION ENDONUCLEASE MSPI ON ITS PALINDROMIC DNA RECOGNITION SITE organism=MORAXELLA SP. DNA sequence DC(C1):DG(D20) DC(C2):DG(D19) DC(C3):DG(D18) DC(C4):DG(D17) DC(C5):DG(D16) DG(C6):DC(D15) DG(C7):DC(D14) DG(C8):DC(D13) DG(C9):DC(D12) DC(F12):DG(E9) DC(F13):DG(E8) DC(F14):DG(E7) DC(F15):DG(E6) DG(F16):DC(E5) DG(F17):DC(E4) DG(F18):DC(E3) DG(F19):DC(E2) DG(F20):DC(E1) chainA (127) SER127 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 (130) GLU130 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ASN246 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (248) THR248 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 (249) TYR249 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 (251) SER251 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 (253) SER253 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) GLN259 0 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 (261) LYS261 0 0 0 0 0 7 9 1 0 0 0 0 0 0 0 0 0 0 chainB ( 28) ASP28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (127) SER127 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (130) GLU130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 (246) ASN246 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (248) THR248 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 (249) TYR249 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 (251) SER251 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 (259) GLN259 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 0 (261) LYS261 0 0 0 0 0 0 0 0 0 0 1 9 7 0 0 0 0 0 prot.sequence mrtellsklyddfgidqlphtqhgvtSDrlgklyekyildifkdieslkkyntnafpqekdisskllkalnldldniidvsssdtdlgrtiaggspktdatirftfhnqssrlvplnikhsskkkvSiaEydvetictgvgisdgelkelirkhqndqsaklftpvqkqrltellepyrerfirwcvtlraeksegnilhpdllirfqvidreyvdvtikniddyvsdriaegskarkpgfgtglNwTYaSgSkakkmQfKg/mrtellsklyddfgidqlphtqhgvtSDrlgklyekyildifkdieslkkyntnafpqekdisskllkalnldldniidvsssdtdlgrtiaggspktdatirftfhnqssrlvplnikhsskkkvSiaEydvetictgvgisdgelkelirkhqndqsaklftpvqkqrltellepyrerfirwcvtlraeksegnilhpdllirfqvidreyvdvtikniddyvsdriaegskarkpgfgtglNwTYaSgskakkmQfKg >1sax_A:"Winged_helix"_DNA-binding_domain; title=THREE-DIMENSIONAL STRUCTURE OF S.AUREUS METHICILLIN-RESISTANCE REGULATING TRANSCRIPTIONAL REPRESSOR MECI IN COMPLEX WITH 25-BP DS- DNA organism=Staphylococcus aureus subsp. aureus DNA sequence DA(D2):DT(C25) DA(D3):DT(C24) DA(D4):DT(C23) DA(D5):DT(C22) DT(D6):DA(C21) DT(D7):DA(C20) DA(D8):DT(C19) DC(D9):DG(C18) DA(D10):DT(C17) DA(D11):DT(C16) DC(D12):DG(C15) DT(D13):DA(C14) DG(D14):DC(C13) DT(D15):DA(C12) DA(D16):DT(C11) DA(D17):DT(C10) DT(D18):DA(C9) DA(D19):DT(C8) DT(D20):DA(C7) DC(D21):DG(C6) DG(D22):DC(C5) DG(D23):DC(C4) DA(D24):DT(C3) DG(D25):DC(C2) chainA ( 41) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 9 2 0 0 0 0 0 0 ( 42) THR44 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 ( 44) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 ( 45) THR47 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 ( 46) LEU48 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 49) ARG51 0 0 0 0 0 0 0 0 0 0 0 11 11 7 0 0 0 0 0 0 0 0 0 0 prot.sequence nktyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrnilnk >1sax_AB:"Winged_helix"_DNA-binding_domain; title=THREE-DIMENSIONAL STRUCTURE OF S.AUREUS METHICILLIN-RESISTANCE REGULATING TRANSCRIPTIONAL REPRESSOR MECI IN COMPLEX WITH 25-BP DS- DNA organism=Staphylococcus aureus subsp. aureus DNA sequence DC(C2):DG(D25) DT(C3):DA(D24) DC(C4):DG(D23) DC(C5):DG(D22) DG(C6):DC(D21) DA(C7):DT(D20) DT(C8):DA(D19) DA(C9):DT(D18) DT(C10):DA(D17) DT(C11):DA(D16) DA(C12):DT(D15) DC(C13):DG(D14) DA(C14):DT(D13) DG(C15):DC(D12) DT(C16):DA(D11) DT(C17):DA(D10) DG(C18):DC(D9) DT(C19):DA(D8) DA(C20):DT(D7) DA(C21):DT(D6) DT(C22):DA(D5) DT(C23):DA(D4) DT(C24):DA(D3) DT(C25):DA(D2) chainA ( 41) LYS43 0 0 0 0 0 0 2 9 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR44 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG46 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR47 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) LEU48 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG51 0 0 0 0 0 0 0 0 0 0 7 11 11 0 0 0 0 0 0 0 0 0 0 0 chainB ( 41) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 6 1 0 0 ( 42) THR44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 ( 44) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 45) THR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 ( 46) LEU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 49) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 13 8 0 0 0 0 0 0 prot.sequence nktyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrnilnk/nktyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrnilnk >1sc7_A:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes;Eukaryotic_DNA_topoisomerase_I,_dispensable_insert_domain; title=HUMAN DNA TOPOISOMERASE I (70 KDA) IN COMPLEX WITH THE INDENOISOQUINOLINE MJ-II-38 AND COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX organism=Homo sapiens DNA sequence DA(B1):DT(D122) DA(B2):DT(D121) DA(B3):DT(D120) DA(B4):DT(D119) DA(B5):DT(D118) DG(B6):DC(D117) DA(B7):DT(D116) DC(B8):DG(D115) DT(B9):DA(D114) DT(B10):DA(D113) chainA (166) ARG364 0 0 0 0 0 0 0 0 0 5 (226) ILE424 0 0 0 0 0 1 0 0 0 0 (227) LYS425 0 0 0 0 0 0 0 0 0 2 (228) TYR426 0 0 0 0 0 0 7 2 0 0 (230) MET428 0 0 0 0 0 0 0 2 1 0 (293) ASN491 0 0 0 0 0 2 1 0 0 0 (334) LYS532 0 0 0 0 0 0 0 3 5 3 (335) ASP533 0 0 0 0 0 0 0 0 0 1 (524) ASN722 0 0 0 0 0 0 0 0 0 1 prot.sequence eeqkwkwweeerypegikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkerianfkieppglfrgRgnhpkmgmlkrrimpediiincskdakvpspppghkwkevrhdnkvtwlvswteniqgsIKYiMlnpssrikgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNekeegetadtvgccslrvehinlhpeldgqeyvvefdflgKDsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynranravailcnhqrappktfeksmmnlqtkidakkeqladarrdlksakadakvmkdaktkkvveskkkavqrleeqlmklevqatdreenkqialgtsklNldpritvawckkwgvpiekiynktqrekfawaidmadedyef >1seu_A:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes;Eukaryotic_DNA_topoisomerase_I,_dispensable_insert_domain; title=HUMAN DNA TOPOISOMERASE I (70 KDA) IN COMPLEX WITH THE INDOLOCARBAZOLE SA315F AND COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX organism=Homo sapiens DNA sequence DA(B1):DT(D122) DA(B2):DT(D121) DA(B3):DT(D120) DA(B4):DT(D119) DA(B5):DT(D118) DG(B6):DC(D117) DA(B7):DT(D116) DC(B8):DG(D115) DT(B9):DA(D114) DT(B10):DA(D113) TGP(C11):DC(D112) chainA (164) ARG364 0 0 0 0 0 0 0 0 0 5 0 (225) LYS425 0 0 0 0 0 0 0 0 0 2 0 (226) TYR426 0 0 0 0 0 0 8 2 0 0 0 (228) MET428 0 0 0 0 0 0 0 0 1 0 0 (236) LYS436 0 0 0 0 0 0 0 0 1 0 0 (291) ASN491 0 0 0 0 0 1 1 0 0 0 0 (332) LYS532 0 0 0 0 0 0 0 0 4 4 0 prot.sequence qkwkwweeerypegikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkerianfkieppglfrgRgnhpkmgmlkrrimpediiincskdakvpspppghkwkevrhdnkvtwlvswteniqgsiKYiMlnpssriKgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNekeegetadtvgccslrvehinlhpeldgqeyvvefdflgKdsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynranravailcnhqrappktfeksmmnlqtkidakkeqladarrdlksakadakvmkdaktkkvveskkkavqrleeqlmklevqatdreenkqialgtsklsldpritvawckkwgvpiekiynktqrekfawaidmadedyef >1sfo_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T1) DC(T2) DG(T3) DA(T4) DT(T5) DC(T6) DC(T7) DT(T8) DC(T9) DT(T10) DC(T11) DG(T12) DA(T13) DT(T14) chainA (232) PHE252 0 0 0 0 0 0 0 0 0 0 0 0 5 2 (237) ARG257 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (297) LYS317 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (330) ARG350 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (427) GLN447 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (428) PRO448 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (811) THR831 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (1336) ARG1386 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisFnesqRgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqKsgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi >1sfo_AB: title=RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T1) DC(T2) DG(T3) DA(T4) DT(T5) DC(T6) DC(T7) DT(T8) DC(T9) DT(T10) DC(T11) DG(T12) DA(T13) DT(T14) chainA (232) PHE252 0 0 0 0 0 0 0 0 0 0 0 0 5 2 (237) ARG257 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (297) LYS317 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (330) ARG350 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (427) GLN447 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (428) PRO448 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (811) THR831 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (1336) ARG1386 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisFnesqRgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqKsgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilEhicyDvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesRkafflgyminrlllcaldrkdqddrdhfgkkrLdlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnTHwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigktTpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >1sfu_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE VIRAL ZALPHA DOMAIN BOUND TO LEFT-HANDED Z- DNA organism=Yaba-like disease virus DNA sequence DC(C1) DG(C2) DC(C3) DG(C4) DC(C5) DG(C6) chainA ( 46) TYR51 0 0 0 16 0 0 prot.sequence ctvndaeifslvkkevlslntndyttaislsnrlkinkkkinqqlYklqkedtvkmvpsnppkwfknync >1skm_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HHAI METHYLTRANSFERASE IN COMPLEX WITH DNA CONTAINING AN ABASIC SOUTH CARBOCYCLIC SUGAR AT ITS TARGET SITE organism=Haemophilus haemolyticus DNA sequence DG(D2):DC(C13) DT(D3):DA(C12) DC(D4):DG(C11) DA(D5):DT(C10) DG(D6):DC(C9) DG(D8):DC(C7) DC(D9):DG(C6) DA(D10):DT(C5) DT(D11):DA(C4) DG(D12):DC(C3) DG(D13):DC(C2) chainA ( 86) ILE86 0 0 0 5 2 0 0 0 0 0 0 ( 87) SER87 0 0 0 0 8 7 0 0 0 0 0 (228) ARG228 0 0 0 2 0 0 0 0 0 0 0 (237) GLN237 0 0 0 0 34 21 0 0 0 0 0 (239) GLU239 0 0 0 0 0 3 0 0 0 0 0 (240) ARG240 0 0 0 10 11 0 0 0 0 0 0 (252) SER252 0 0 0 0 0 2 0 0 0 0 0 (260) ALA260 0 0 0 0 0 0 0 1 0 0 0 (261) LYS261 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgERiystrgiaitlSaygggifAKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy >1skn_P:A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=THE BINDING DOMAIN OF SKN-1 IN COMPLEX WITH DNA: A NEW DNA-BINDING MOTIF organism=Caenorhabditis elegans DNA sequence DG(B3):DC(A15) DG(B4):DC(A14) DG(B5):DC(A13) DA(B6):DT(A12) DT(B7):DA(A11) DG(B8):DC(A10) DA(B9):DT(A9) DC(B10):DG(A8) DA(B11):DT(A7) DT(B12):DA(A6) DT(B13):DA(A5) DG(B14):DC(A4) DT(B15):DA(A3) chainP ( 52) ARG507 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 56) ASN511 0 0 0 1 8 7 3 0 0 0 0 0 0 ( 60) ALA515 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 63) CYS518 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 64) ARG519 0 0 0 0 0 0 2 15 18 0 0 0 0 ( 67) ARG522 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence grqskdeqlasdnelpvsafqisemslselqqvlkneslseyqrqlirkirRrgkNkvaArtCRqrRtdrhdkm >1skr_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=T7 DNA POLYMERASE COMPLEXED TO DNA PRIMER/TEMPLATE AND DDATP organism=ENTEROBACTERIA PHAGE T7 DNA sequence DG(P12):DC(T15) DC(P13):DG(T14) DC(P14):DG(T13) DA(P15):DT(T12) DG(P16):DC(T11) DT(P17):DA(T10) DG(P18):DC(T9) DC(P19):DG(T8) DC(P20):DG(T7) DA(P21):DT(T6) 2DA(P22):DT(T5) DAD(A4004):DT(T4) chainA (370) LYS394 0 0 0 0 0 0 0 5 1 0 0 0 (405) ARG429 0 0 0 0 0 0 0 0 0 1 8 1 (412) ASN436 0 0 0 0 0 0 0 0 1 0 0 0 (415) GLN439 0 0 0 0 0 0 0 7 8 0 0 0 (451) ASP475 0 0 0 0 0 0 0 0 0 0 0 6 (453) SER477 0 0 0 0 0 0 0 0 0 0 0 1 (455) LEU479 0 0 0 0 0 0 0 0 0 0 0 1 (456) GLU480 0 0 0 0 0 0 0 0 0 0 0 1 (482) HIS506 0 0 0 0 0 0 0 0 0 0 0 8 (494) ARG518 0 0 0 0 0 0 0 0 0 0 0 6 (498) LYS522 0 0 0 0 0 0 0 0 0 0 0 12 (499) THR523 0 0 0 0 0 0 0 0 0 0 0 2 (502) TYR526 0 0 0 0 0 0 0 0 0 0 0 22 (506) TYR530 0 0 0 0 0 0 0 0 0 0 0 9 (512) LYS536 0 0 0 0 0 0 0 0 0 0 0 2 (516) ILE540 0 0 0 0 0 0 0 0 0 0 0 1 (576) ASN611 0 0 0 0 0 0 0 0 0 0 1 0 (580) GLN615 0 0 0 0 0 0 0 0 0 1 1 0 (619) ASP654 0 0 0 0 0 0 0 0 0 0 0 5 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggidtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnakTfiygflYgagdeKigqIvgagkergkelkkkflentpaiaalresiqqtlvekwkrrwikgldgrkvhvrsphaalNtllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1sks_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A CIS-SYN THYMINE DIMER ON THE TEMPLATE organism=ENTEROBACTERIA PHAGE T7 DNA sequence DC(P13):DG(T14) DC(P14):DG(T13) DA(P15):DT(T12) DG(P16):DC(T11) DT(P17):DA(T10) DG(P18):DC(T9) DC(P19):DG(T8) DC(P20):DG(T7) 2DT(P21):DA(T6) chainA (382) LYS394 0 0 0 0 0 6 0 0 0 (417) ARG429 0 0 0 0 0 0 0 0 3 (424) ASN436 0 0 0 0 0 0 1 0 0 (427) GLN439 0 0 0 0 0 6 8 0 0 (518) TYR530 0 0 0 0 0 0 0 0 19 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggifkkpknrepceldtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflYgagdekigqivgagkergkelkkkflentpaiaalresiqqtlvekwkrrwikgldgrkvhvrsphaalntllqsagalicklwiikteemlvekglkhgwdgdfaymawvhdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1skw_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A DISORDERED CIS-SYN THYMINE DIMER ON THE TEMPLATE organism=ENTEROBACTERIA PHAGE T7 DNA sequence DA(T6):2DT(P21) DG(T7):DC(P20) DG(T8):DC(P19) DC(T9):DG(P18) DA(T10):DT(P17) DC(T11):DG(P16) DT(T12):DA(P15) DG(T13):DC(P14) chainA (379) LYS394 0 0 2 6 0 0 0 0 (414) ARG429 6 3 0 0 0 0 0 0 (421) ASN436 0 0 1 0 0 0 0 0 (424) GLN439 0 0 7 5 0 0 0 0 (515) TYR530 13 0 0 0 0 0 0 0 (589) GLN615 2 0 0 0 0 0 0 0 (627) HIS653 0 1 0 0 0 0 0 0 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggifkkpknceldtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflYgagdekigqivgagkergkelkkkflentpaiaalresiqqtlvekwkrrwikgldgrkvhvrsphaalntllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1sl0_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A DISORDERED CIS-SYN THYMINE DIMER ON THE TEMPLATE AND AN INCOMING NUCLEOTIDE organism=ENTEROBACTERIA PHAGE T7 DNA sequence DG(P12):DC(T15) DC(P13):DG(T14) DC(P14):DG(T13) DA(P15):DT(T12) DG(P16):DC(T11) DT(P17):DA(T10) DG(P18):DC(T9) DC(P19):DG(T8) DC(P20):DG(T7) 2DT(P21):DA(T6) chainA (366) LYS394 0 0 0 0 0 0 6 2 0 0 (401) ARG429 0 0 0 0 0 0 0 0 1 4 (408) ASN436 0 0 0 0 0 0 0 1 0 0 (411) GLN439 0 0 0 0 0 0 5 9 0 0 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpvgdtreyvaapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygfkigqivgagkergkelkkkflentpaiaalresiqqtlvekwkrrwikgldgrkvhvrsphaalntllqsagalicklwiikteemlvekglkhgwdgdfaymawvhdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1sl1_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY 5' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A CIS-SYN THYMINE DIMER ON THE TEMPLATE organism=ENTEROBACTERIA PHAGE T7 DNA sequence DC(P14):DG(T13) DA(P15):DT(T12) DG(P16):DC(T11) DT(P17):DA(T10) DG(P18):DC(T9) DC(P19):DG(T8) DC(P20):DG(T7) DT(P21):DA(T6) chainA (379) LYS394 0 0 0 0 6 0 0 0 (421) ASN436 0 0 0 0 0 1 0 0 (424) GLN439 0 0 0 0 5 7 0 0 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggifkkpepceldtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgrathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflygagdekigqivgagkergkelkkkflentpaiaalresiqqtlvekwkrrwikgldgrkvhvrsphaalntllqsagalicklwiikteemlvekglkhgwdgdfaymawvhdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1sl2_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY 5' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A CIS-SYN THYMINE DIMER ON THE TEMPLATE AND AN INCOMING NUCLEOTIDE organism=ENTEROBACTERIA PHAGE T7 DNA sequence DA(T6):DT(P21) DG(T7):DC(P20) DG(T8):DC(P19) DC(T9):DG(P18) DA(T10):DT(P17) DC(T11):DG(P16) DT(T12):DA(P15) DG(T13):DC(P14) chainA (371) LYS394 0 0 7 0 0 0 0 0 (406) ARG429 2 0 0 0 0 0 0 0 (413) ASN436 0 1 0 0 0 0 0 0 (416) GLN439 0 7 6 0 0 0 0 0 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggildtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflydekigqivgagkergkelkkkflentpaiaalresiqqtlvekwkrrwikgldgrkvhvrsphaalntllqsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1srs_AB:SRF-like; title=SERUM RESPONSE FACTOR (SRF) CORE COMPLEXED WITH SPECIFIC SRE DNA organism=Homo sapiens DNA sequence DC(W-8):DG(C-8) 5IU(W-7):DA(C-7) DT(W-6):DA(C-6) DC(W-5):DG(C-5) DC(W-4):DG(C-4) DT(W-3):DA(C-3) DA(W-2):DT(C-2) DA(W-1):DT(C-1) DT(W1):DA(C1) DT(W2):DA(C2) DA(W3):DT(C3) DG(W4):DC(C4) DG(W5):DC(C5) DC(W6):DG(C6) DC(W7):DG(C7) DA(W8):DT(C8) DT(W9):DA(C9) DG(W10):DC(C10) chainA ( 1) THR140 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG143 0 0 0 0 0 7 12 7 0 0 0 0 0 0 0 0 0 0 ( 24) LYS163 0 0 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 1) THR140 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 ( 4) ARG143 0 0 0 0 0 0 0 0 6 11 8 0 0 0 0 0 0 0 ( 20) THR159 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 23) SER162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 24) LYS163 0 0 0 0 0 0 0 0 0 0 0 7 5 3 0 0 0 0 prot.sequence TrgRvkikmefidnklrryttfsKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclnspd/TrgRvkikmefidnklrryTtfSKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtcl >1srs_B:SRF-like; title=SERUM RESPONSE FACTOR (SRF) CORE COMPLEXED WITH SPECIFIC SRE DNA organism=Homo sapiens DNA sequence DC(C10):DG(W10) DA(C9):DT(W9) DT(C8):DA(W8) DG(C7):DC(W7) DG(C6):DC(W6) DC(C5):DG(W5) DC(C4):DG(W4) DT(C3):DA(W3) DA(C2):DT(W2) DA(C1):DT(W1) DT(C-1):DA(W-1) DT(C-2):DA(W-2) DA(C-3):DT(W-3) DG(C-4):DC(W-4) DG(C-5):DC(W-5) DA(C-6):DT(W-6) DA(C-7):5IU(W-7) DG(C-8):DC(W-8) chainB ( 1) THR140 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG143 0 0 0 0 0 0 0 8 11 6 0 0 0 0 0 0 0 0 ( 20) THR159 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) SER162 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS163 0 0 0 0 3 5 7 0 0 0 0 0 0 0 0 0 0 0 prot.sequence TrgRvkikmefidnklrryTtfSKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtcl >1ssp_E:Uracil-DNA_glycosylase-like; title=WILD-TYPE URACIL-DNA GLYCOSYLASE BOUND TO URACIL-CONTAINING DNA organism=Homo sapiens DNA sequence DA(B22):DT(A10) DA(B23):DT(A9) DG(B24):DC(A8) DA(B25):DT(A7) DT(B26):DA(A6) DA(B27):ORP(A5) DA(B28):DT(A4) DC(B29):DG(A3) DA(B30):DT(A2) DG(B31):DC(A1) chainE ( 63) GLN144 0 0 0 0 0 6 0 0 0 0 ( 64) ASP145 0 0 0 0 0 5 0 0 0 0 ( 66) TYR147 0 0 0 0 0 3 0 0 0 0 ( 67) HIS148 0 0 0 0 0 4 0 0 0 0 ( 88) SER169 0 0 0 0 0 4 0 0 0 0 (133) ALA214 0 0 0 0 0 2 0 0 0 0 (187) HIS268 0 0 0 0 0 11 0 0 0 0 (189) SER270 0 0 0 0 0 4 0 0 0 0 (190) PRO271 0 0 0 0 0 0 6 0 0 0 (191) LEU272 0 0 0 0 30 3 22 0 0 0 (194) TYR275 0 0 0 0 0 1 0 0 0 0 (195) ARG276 0 0 0 1 2 0 0 0 0 0 prot.sequence meffgeswkkhlsgefgkpyfiklmgfvaeerkhytvyppphqvftwtqmcdikdvkvvilgqdpyhgpnqahglcfsvqrpvppppsleniykelstdiedfvhpghgdlsgwakqgvlllnavltvrahqanshkergweqftdavvswlnqnsnglvfllwgsyaqkkgsaidrkrhhvlqtahpsPLsvYRgffgcrhfsktnellqksgkkpidwkel >1stx_A:Restriction_endonuclease-like; title=STRUCTURE OF THE K38A MUTANT OF ECORV BOUND TO COGNATE DNA AND MN2+ organism=Escherichia coli DNA sequence DA(E2):DT(D11) DA(E3):DT(D10) DG(E4):DC(D9) DA(E5):DT(D8) DT(E6):DA(D7) DA(F7):DT(C6) DT(F8):DA(C5) DC(F9):DG(C4) DT(F10):DA(C3) DT(F11):DA(C2) chainA ( 69) ASN70 0 0 0 0 0 3 5 4 0 0 (105) THR106 0 0 1 10 0 0 0 0 0 0 (182) SER183 0 0 4 7 0 0 0 0 0 0 (184) ASN185 0 0 19 13 0 0 0 0 0 0 (185) THR186 0 0 0 8 1 6 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtavlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1stx_AB:Restriction_endonuclease-like; title=STRUCTURE OF THE K38A MUTANT OF ECORV BOUND TO COGNATE DNA AND MN2+ organism=Escherichia coli DNA sequence DA(E2):DT(D11) DA(E3):DT(D10) DG(E4):DC(D9) DA(E5):DT(D8) DT(E6):DA(D7) DA(F7):DT(C6) DT(F8):DA(C5) DC(F9):DG(C4) DT(F10):DA(C3) DT(F11):DA(C2) chainA ( 69) ASN70 0 0 0 0 0 3 5 4 0 0 (105) THR106 0 0 1 10 0 0 0 0 0 0 (182) SER183 0 0 4 7 0 0 0 0 0 0 (184) ASN185 0 0 19 13 0 0 0 0 0 0 (185) THR186 0 0 0 8 1 6 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 chainB ( 69) ASN70 0 0 1 3 3 0 0 0 0 0 (105) THR106 0 0 0 0 0 0 10 1 0 0 (182) SER183 0 0 0 0 0 0 7 4 0 0 (184) ASN185 0 0 0 0 0 0 11 17 0 0 (185) THR186 0 0 0 0 4 3 7 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtavlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtavlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1suz_A:Restriction_endonuclease-like; title=THE STRUCTURE OF K92A ECORV BOUND TO COGNATE DNA AND MG2+ organism=Escherichia coli DNA sequence DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainA ( 69) ASN70 0 6 8 3 0 0 0 0 0 (105) THR106 0 0 0 0 0 10 1 0 0 (181) SER183 0 0 0 0 0 7 2 0 0 (183) ASN185 0 0 0 0 0 10 18 0 0 (184) THR186 0 0 0 5 3 7 0 0 0 (186) ASN188 0 0 0 1 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidiattytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1suz_AB:Restriction_endonuclease-like; title=THE STRUCTURE OF K92A ECORV BOUND TO COGNATE DNA AND MG2+ organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) DT(D6):DA(C7) DA(D7):DT(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) chainA ( 69) ASN70 0 0 0 0 0 3 8 6 0 (105) THR106 0 0 1 10 0 0 0 0 0 (181) SER183 0 0 2 7 0 0 0 0 0 (183) ASN185 0 0 18 10 0 0 0 0 0 (184) THR186 0 0 0 7 3 5 0 0 0 (186) ASN188 0 0 0 4 0 1 0 0 0 chainB ( 69) ASN70 0 1 4 5 1 0 0 0 0 (102) THR106 0 0 0 0 0 0 10 1 0 (175) SER183 0 0 0 0 0 0 7 2 0 (177) ASN185 0 0 0 0 0 0 12 19 0 (178) THR186 0 0 0 0 5 3 9 0 0 (180) ASN188 0 0 0 0 1 0 4 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidiattytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidiattytnekikfTlggytsfirnntkNivypfdqyiahwiigyvytrvaslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1svc_P:p53-like_transcription_factors;E_set_domains; title=NFKB P50 HOMODIMER BOUND TO DNA organism=Homo sapiens DNA sequence DA(D1) DG(D2) DA(D3) DT(D4) DG(D5) DG(D6) DG(D7) DG(D8) DA(D9) DA(D10) DT(D11) DC(D12) DC(D13) DC(D14) DC(D15) DT(D16) DA(D17) DG(D18) DA(D19) chainP ( 15) ARG57 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 ( 17) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 18) TYR60 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 ( 21) GLU63 0 0 0 0 0 0 0 0 0 0 0 13 8 0 0 0 0 0 0 ( 25) HIS67 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (202) LYS244 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 (266) ARG308 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pylqileqpkqrgfRfRYvaEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgictvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhpdlaylqaegggdrqlgdrekelirqaalqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhRqfaivfktpkykdinitkpasvfvqlrrksdletsepkpflyype >1sx5_A:Restriction_endonuclease-like; title=K38A ECORV BOUND TO CLEAVED DNA AND MN2+: P1 CRYSTAL FORM organism=Escherichia coli DNA sequence DA(C2):DT(F11) DA(C3):DT(F10) DG(C4):DC(F9) DA(C5):DT(F8) DT(C6):DA(F7) DA(D7):DT(E6) DT(D8):DA(E5) DC(D9):DG(E4) DT(D10):DA(E3) DT(D11):DA(E2) chainA ( 69) ASN70 0 0 5 7 3 0 0 0 0 0 (105) THR106 0 0 0 0 0 0 10 1 0 0 (182) SER183 0 0 0 0 0 0 6 4 0 0 (184) ASN185 0 0 0 0 0 0 10 18 0 0 (185) THR186 0 0 0 0 4 3 5 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtavlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1sx5_AB:Restriction_endonuclease-like; title=K38A ECORV BOUND TO CLEAVED DNA AND MN2+: P1 CRYSTAL FORM organism=Escherichia coli DNA sequence DA(E2):DT(D11) DA(E3):DT(D10) DG(E4):DC(D9) DA(E5):DT(D8) DT(E6):DA(D7) DA(F7):DT(C6) DT(F8):DA(C5) DC(F9):DG(C4) DT(F10):DA(C3) DT(F11):DA(C2) chainA ( 69) ASN70 0 0 0 0 0 3 7 5 0 0 (105) THR106 0 0 1 10 0 0 0 0 0 0 (182) SER183 0 0 4 6 0 0 0 0 0 0 (184) ASN185 0 0 18 10 0 0 0 0 0 0 (185) THR186 0 0 0 5 3 4 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 chainB ( 69) ASN70 0 1 4 4 1 0 0 0 0 0 (102) THR106 0 0 0 0 0 0 9 1 0 0 (176) SER183 0 0 0 0 0 0 6 4 0 0 (178) ASN185 0 0 0 0 0 0 11 19 0 0 (179) THR186 0 0 0 0 6 1 8 0 0 0 (181) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtavlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsDtavlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnekikfTlggytsfirnntknivypfdqyiahwiigyvytrvksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1sx8_A:Restriction_endonuclease-like; title=ECORV BOUND TO COGNATE DNA AND MN2+ organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) DT(D6):DA(C7) DA(D7):DT(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) chainA ( 69) ASN70 0 0 0 0 0 2 9 5 0 (105) THR106 0 0 0 11 0 0 0 0 0 (179) SER183 0 0 4 9 0 0 0 0 0 (181) ASN185 0 0 16 10 0 0 0 0 0 (182) THR186 0 0 0 9 3 5 0 0 0 (184) ASN188 0 0 0 4 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidiattytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1sx8_AB:Restriction_endonuclease-like; title=ECORV BOUND TO COGNATE DNA AND MN2+ organism=Escherichia coli DNA sequence DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainA ( 69) ASN70 0 5 9 2 0 0 0 0 0 (105) THR106 0 0 0 0 0 11 0 0 0 (179) SER183 0 0 0 0 0 9 4 0 0 (181) ASN185 0 0 0 0 0 10 16 0 0 (182) THR186 0 0 0 5 3 9 0 0 0 (184) ASN188 0 0 0 0 0 4 0 0 0 chainB ( 69) ASN70 0 0 0 0 0 4 4 0 0 (101) THR106 0 0 9 0 0 0 0 0 0 (173) SER183 0 2 6 0 0 0 0 0 0 (175) ASN185 0 16 9 0 0 0 0 0 0 (176) THR186 0 0 8 1 5 0 0 0 0 (178) ASN188 0 0 4 0 1 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidiattytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidiattytnkikfTlggytsfirnntknivypfdqyiahwiigyvytrvslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >1sxp_A:UDP-Glycosyltransferase/glycogen_phosphorylase; title=BGT IN COMPLEX WITH A 13MER DNA CONTAINING A CENTRAL A:G MISMATCH organism=Enterobacteria phage T4 DNA sequence DA(C2):DT(D25) DT(C3):DA(D24) DA(C4):DT(D23) DC(C5):DG(D22) DT(C6):DA(D21) DA(C7):DG(D20) DA(C8):DT(D19) DG(C9):DC(D18) DA(C10):DT(D17) DT(C11):DA(D16) DA(C12):DT(D15) DG(C13):DC(D14) chainA ( 10) ASN10 0 0 0 0 0 2 0 0 0 0 0 0 ( 19) PRO19 0 0 0 0 0 3 0 0 0 0 0 0 ( 22) GLU22 0 0 0 0 0 7 0 0 0 0 0 0 ( 66) ASN66 0 0 0 0 0 1 0 0 0 0 0 0 ( 70) ASN70 0 0 0 0 0 9 32 0 0 0 0 0 ( 71) PHE71 0 0 0 0 0 2 0 0 0 0 0 0 ( 72) PHE72 0 0 0 0 108 1 0 0 0 0 0 0 ( 75) LYS75 0 0 0 0 12 0 0 0 0 0 0 0 ( 99) THR99 0 0 0 0 0 1 0 0 0 0 0 0 (100) ASP100 0 0 0 0 0 2 0 0 0 0 0 0 (102) ARG102 0 0 0 0 0 4 0 0 0 0 0 0 (103) LEU103 0 0 0 0 0 8 0 0 0 0 0 0 (115) ARG115 0 0 0 0 0 13 8 0 0 0 0 0 prot.sequence mkiaiinmgNnvinfktvPssEtiylfkvisemglnvdiislkngvytksfdevdvndydrlivvNssiNFFggKpnlailsaqkfmakykskiyylfTDiRLpfsqswpnvknRpwaylyteeellikspikvisqginldiakaahkkvdnviefeyfpieqykihmndfqlskptkktldviyggsfrsgqreskmveflfdtglnieffgnarekqfknpkypwtkapvftgkipmnmvseknsqaiaaliigdknyndnfitlrvwetmasdavmlideefdtkhriindarfyvnnraelidrvnelkhsdvlrkemlsiqhdilnktrakkaewqdafkkaidl >1sxp_AB:UDP-Glycosyltransferase/glycogen_phosphorylase; title=BGT IN COMPLEX WITH A 13MER DNA CONTAINING A CENTRAL A:G MISMATCH organism=Enterobacteria phage T4 DNA sequence DA(C2):DT(D25) DT(C3):DA(D24) DA(C4):DT(D23) DC(C5):DG(D22) DT(C6):DA(D21) DA(C7):DG(D20) DA(C8):DT(D19) DG(C9):DC(D18) DA(C10):DT(D17) DT(C11):DA(D16) DA(C12):DT(D15) DG(C13):DC(D14) chainA ( 10) ASN10 0 0 0 0 0 2 0 0 0 0 0 0 ( 19) PRO19 0 0 0 0 0 3 0 0 0 0 0 0 ( 22) GLU22 0 0 0 0 0 7 0 0 0 0 0 0 ( 66) ASN66 0 0 0 0 0 1 0 0 0 0 0 0 ( 70) ASN70 0 0 0 0 0 9 32 0 0 0 0 0 ( 71) PHE71 0 0 0 0 0 2 0 0 0 0 0 0 ( 72) PHE72 0 0 0 0 108 1 0 0 0 0 0 0 ( 75) LYS75 0 0 0 0 12 0 0 0 0 0 0 0 ( 99) THR99 0 0 0 0 0 1 0 0 0 0 0 0 (100) ASP100 0 0 0 0 0 2 0 0 0 0 0 0 (102) ARG102 0 0 0 0 0 4 0 0 0 0 0 0 (103) LEU103 0 0 0 0 0 8 0 0 0 0 0 0 (115) ARG115 0 0 0 0 0 13 8 0 0 0 0 0 chainB (215) ASN215 0 0 0 0 0 0 0 0 0 0 1 14 (217) ARG217 0 0 0 0 0 0 0 0 0 1 4 6 (220) GLN220 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mkiaiinmgNnvinfktvPssEtiylfkvisemglnvdiislkngvytksfdevdvndydrlivvNssiNFFggKpnlailsaqkfmakykskiyylfTDiRLpfsqswpnvknRpwaylyteeellikspikvisqginldiakaahkkvdnviefeyfpieqykihmndfqlskptkktldviyggsfrsgqreskmveflfdtglnieffgnarekqfknpkypwtkapvftgkipmnmvseknsqaiaaliigdknyndnfitlrvwetmasdavmlideefdtkhriindarfyvnnraelidrvnelkhsdvlrkemlsiqhdilnktrakkaewqdafkkaidl/mkiaiinmgnnvinfktvpssetiylfkvisemglnvdiislkngvytksfdevdvndydrlivvnssinffggkpnlailsaqkfmakykskiyylftdirlpfsqswpnvknrpwaylyteeellikspikvisqginldiakaahkkvdnviefeyfpieqykihmndfqlskptkktldviyggsfrsgqreskmveflfdtglnieffgNaRekQfknpkypwtkapvftgkipmnmvseknsqaiaaliigdknyndnfitlrvwetmasdavmlideefdtkhriindarfyvnnraelidrvnelkhsdvlrkemlsiqhdilnktrakkaewqdafkkaidl >1sxq_A:UDP-Glycosyltransferase/glycogen_phosphorylase; title=BGT IN COMPLEX WITH A 13MER DNA CONTAINING A CENTRAL C:G BASE PAIR AND UDP organism=Enterobacteria phage T4 DNA sequence DA(E14):DT(C13) DA(E15):DT(C12) DA(E16):DT(C11) DA(E17):DT(C10) DA(E18):DT(C9) DA(E19):DT(C8) DC(E20):DG(C7) DT(E21):DA(C6) DT(E22):DA(C5) DT(E23):DA(C4) DT(E24):DA(C3) DT(E25):DA(C2) DT(E26):DA(C1) chainA ( 68) SER68 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN70 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) PHE72 10 47 0 0 0 0 0 0 0 0 0 0 0 ( 75) LYS75 0 12 0 0 0 0 0 0 0 0 0 0 0 ( 76) PRO76 7 0 0 0 0 0 0 0 0 0 0 0 0 (116) PRO116 4 0 0 0 0 0 0 0 0 0 0 0 0 (117) TRP117 15 0 0 0 0 0 0 0 0 0 0 0 0 (119) TYR119 8 0 0 0 0 0 0 0 0 0 0 0 0 (120) LEU120 2 0 0 0 0 0 0 0 0 0 0 0 0 (192) SER192 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkiaiinmgnnvinfktvpssetiylfkvisemglnvdiislkngvytksfdevdvndydrlivvnsSiNfFggKPnlailsaqkfmakykskiyylftdirlpfsqswpnvknrPWaYLyteeellikspikvisqginldiakaahkkvdnviefeyfpieqykihmndfqlskptkktldviyggsfrSgqreskmveflfdtglnieffgnarekqfknpkypwtkapvftgkipmnmvseknsqaiaaliigdknyndnfitlrvwetmasdavmlideefdtkhriindarfyvnnraelidrvnelkhsdvlrkemlsiqhdilnktrakkaewqdafkkaidl >1t03_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO TENOFOVIR TERMINATED TEMPLATE-PRIMER (COMPLEX P) organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 (184) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (356) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (448) ARG448 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk >1t03_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO TENOFOVIR TERMINATED TEMPLATE-PRIMER (COMPLEX P) organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 94) ILE94 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk/pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >1t05_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO TEMPLATE-PRIMER WITH TENOFOVIR-DIPHOSPHATE BOUND AS THE INCOMING NUCLEOTIDE SUBSTRATE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 94) ILE94 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 2 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgipHpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymDdlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >1t2k_A:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE DNA BINDING DOMAINS OF IRF3, ATF-2 AND JUN BOUND TO DNA organism=? DNA sequence DA(E2):DT(F31) DA(E3):DT(F30) DA(E4):DT(F29) DT(E5):DA(F28) DG(E6):DC(F27) DA(E7):DT(F26) DC(E8):DG(F25) DA(E9):DT(F24) DT(E10):DA(F23) DA(E11):DT(F22) DG(E12):DC(F21) DG(E13):DC(F20) DA(E14):DT(F19) DA(E15):DT(F18) DA(E16):DT(F17) DA(E17):DT(F16) DC(E18):DG(F15) DT(E19):DA(F14) DG(E20):DC(F13) DA(E21):DT(F12) DA(E22):DT(F11) DA(E23):DT(F10) DG(E24):DC(F9) DG(E25):DC(F8) DG(E26):DC(F7) DA(E27):DT(F6) DG(E28):DC(F5) DA(E29):DT(F4) DA(E30):DT(F3) DG(E31):DC(F2) chainA ( 40) LEU42 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ARG81 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpkprilpwlvsqldlgqlegvawvnksrtrfripwkhgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSalnRkeglrlaedrskdphdphkiyefvns >1t2k_ABCD:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE DNA BINDING DOMAINS OF IRF3, ATF-2 AND JUN BOUND TO DNA organism=HOMO SAPIENS DNA sequence DA(E2):DT(F31) DA(E3):DT(F30) DA(E4):DT(F29) DT(E5):DA(F28) DG(E6):DC(F27) DA(E7):DT(F26) DC(E8):DG(F25) DA(E9):DT(F24) DT(E10):DA(F23) DA(E11):DT(F22) DG(E12):DC(F21) DG(E13):DC(F20) DA(E14):DT(F19) DA(E15):DT(F18) DA(E16):DT(F17) DA(E17):DT(F16) DC(E18):DG(F15) DT(E19):DA(F14) DG(E20):DC(F13) DA(E21):DT(F12) DA(E22):DT(F11) DA(E23):DT(F10) DG(E24):DC(F9) DG(E25):DC(F8) DG(E26):DC(F7) DA(E27):DT(F6) DG(E28):DC(F5) DA(E29):DT(F4) DA(E30):DT(F3) DG(E31):DC(F2) chainA ( 40) LEU42 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ARG81 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 37) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LEU42 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 5 3 0 0 0 0 0 0 0 0 0 ( 76) ASN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 78) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 ( 79) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 80) ALA83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 83) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 6 4 0 0 0 0 0 0 0 chainC ( 10) ASN262 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG263 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ALA266 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) SER269 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG270 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 9) ASN344 0 0 0 7 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG345 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ALA347 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ALA348 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER351 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG352 0 0 0 0 0 2 8 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpkprilpwlvsqldlgqlegvawvnksrtrfripwkhgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSalnRkeglrlaedrskdphdphkiyefvns/pkprilpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSAlnRkeglrlaedrskdphdphkiyefvn/mkaerkrmrNRiaAskSRkrkleriarleekvktlkaqnselastanmlreqvaqlkqkvmn/krrkflerNRaAAsrSRqkrkvwvqslekkaedlsslngqlqsevtllrnevaqlkqllla >1t2t_A:DNA-binding_domain_of_intron-encoded_endonucleases; title=CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF INTRON ENDONUCLEASE I- TEVI WITH OPERATOR SITE organism=Enterobacteria phage T4 DNA sequence DT(B2):DA(C51) DT(B3):DA(C50) DG(B4):DC(C49) DT(B5):DA(C48) DA(B6):DT(C47) DG(B7):DC(C46) DG(B8):DC(C45) DA(B9):DT(C44) DC(B10):DG(C43) DT(B11):DA(C42) DG(B12):DC(C41) DC(B13):DG(C40) DC(B14):DG(C39) DC(B15):DG(C38) DT(B16):DA(C37) DT(B17):DA(C36) DT(B18):DA(C35) DA(B19):DT(C34) DA(B20):DT(C33) DT(B21):DA(C32) chainA ( 10) GLN158 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG168 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG170 0 0 1 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ASN175 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER176 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) PHE177 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) HIS182 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ILE190 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 ( 46) MET194 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 ( 51) PRO199 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 ( 53) ASN201 0 0 0 0 0 0 0 0 0 0 3 9 3 0 0 0 0 0 0 0 ( 77) SER225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 78) SER226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 80) LEU228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 ( 82) THR230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 ( 83) TYR231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 prot.sequence kfckcgvriQtsaytcskcRnRsgenNSFfnhkHsditkskIsekMkgkkPsNikkiscdgvifdcaadaarhfkiSSgLvTYrvksdkwnwfyin >1t38_A:Methylated_DNA-protein_cysteine_methyltransferase,_C-terminal_domain;Methylated_DNA-protein_cysteine_methyltransferase_domain; title=HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE BOUND TO DNA CONTAINING O6- METHYLGUANINE organism=Homo sapiens DNA sequence DT(C14):DA(B13) DA(C15):DT(B12) DC(C16):DG(B11) DT(C17):DA(B10) DA(C18):DT(B9) DG(C19):DC(B8) DC(C20):6OG(B7) DC(C21):DG(B6) DA(C22):DT(B5) DT(C23):DA(B4) DG(C24):DC(B3) DG(C25):DC(B2) DC(C26):DG(B1) chainA ( 89) TYR114 0 0 0 0 0 0 13 0 0 0 0 0 0 (103) ARG128 0 0 0 0 0 54 6 40 0 0 0 0 0 (104) ALA129 0 0 0 0 0 0 0 1 2 0 0 0 0 (109) MET134 0 0 0 0 0 0 11 0 0 0 0 0 0 (110) ARG135 0 0 0 0 0 0 3 0 0 0 0 0 0 (120) SER145 0 0 0 0 0 0 4 0 0 0 0 0 0 (123) VAL148 0 0 0 0 0 0 3 0 0 0 0 0 0 (133) TYR158 0 0 0 0 0 0 15 0 0 0 0 0 0 (134) SER159 0 0 0 0 0 0 6 0 0 0 0 0 0 (140) LYS165 0 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence emkrttldsplgklelsgceqglheikllgpeplmqctawlnayfhqpeaieefpvpalhhpvfqqesftrqvlwkllkvvkfgevisyqqlaalagnpkaaRAvggamrgnpvpilipshrvvcssgavgnysgglavkewllaheghrl >1t39_B:Methylated_DNA-protein_cysteine_methyltransferase,_C-terminal_domain;Methylated_DNA-protein_cysteine_methyltransferase_domain; title=HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE COVALENTLY CROSSLINKED TO DNA organism=Homo sapiens DNA sequence DG(E1):DC(F26) DC(E2):DG(F25) DC(E3):DG(F24) DA(E4):DT(F23) DT(E5):DA(F22) DG(E6):DC(F21) E1X(E7):DC(F20) DC(E8):DG(F19) DT(E9):DA(F18) DA(E10):DT(F17) DG(E11):DC(F16) DT(E12):DA(F15) DA(E13):DT(F14) chainB ( 88) TYR114 0 0 0 0 0 0 13 0 0 0 0 0 0 (102) ARG128 0 0 0 0 0 96 16 21 0 0 0 0 0 (108) MET134 0 0 0 0 0 0 10 0 0 0 0 0 0 (109) ARG135 0 0 0 0 0 0 2 0 0 0 0 0 0 (119) CYS145 0 0 0 0 0 0 8 0 0 0 0 0 0 (122) VAL148 0 0 0 0 0 0 2 0 0 0 0 0 0 (131) ASN157 0 0 0 0 0 0 1 0 0 0 0 0 0 (132) TYR158 0 0 0 0 0 0 6 0 0 0 0 0 0 (133) SER159 0 0 0 0 0 0 5 0 0 0 0 0 0 (139) LYS165 0 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence mkrttldsplgklelsgceqglheikllgpeplmqctawlnayfhqpeaieefpvpalhhpvfqqesftrqvlwkllkvvkfgevisyqqlaalagnpkaaRavggamrgnpvpilipchrvvcssgavgnysgglavkewllahegh >1t3n_AB:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF THE CATALYTIC CORE OF DNA POLYMERASE IOTA IN COMPLEX WITH DNA AND DTTP organism=Homo sapiens DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DC(P11):DG(T8) DC(P12):DG(T7) DOC(P13):DG(T6) TTP(B902):DA(T5) chainA ( 97) LEU123 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) GLU305 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) ARG343 0 0 0 0 3 4 0 0 0 0 0 0 0 0 (331) ARG357 0 1 3 0 0 0 0 0 0 0 0 0 0 0 (335) GLN361 0 0 0 0 0 4 0 0 0 0 0 0 0 0 chainB ( 8) ASP454 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 10) ASP456 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 11) CYS457 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 12) PHE458 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 13) TYR459 0 0 0 0 0 0 0 0 0 0 0 0 2 3 ( 33) GLN479 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 36) LEU482 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 38) VAL484 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 39) THR485 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 42) TYR488 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 45) ARG491 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 52) LEU498 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 73) LEU519 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (100) ASP546 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (101) GLU547 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (188) LYS634 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (275) SER721 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (279) GLU725 0 0 0 0 0 0 0 0 0 0 0 2 2 0 (317) ARG763 0 0 0 0 0 0 6 6 0 0 0 0 0 0 (335) GLN781 0 0 0 0 0 0 8 0 0 0 0 0 0 0 prot.sequence srvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverLgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssekhygResrQcpipshviqklgtgnydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk/srvivhvdldcfYaqvemisnpelkdkplgvqQkyLvVtcnyearklgvkklmnvrdakekcpqlvlvngedLtryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqSfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssekhygresrQcpipshviqklgtgnydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >1t3n_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF THE CATALYTIC CORE OF DNA POLYMERASE IOTA IN COMPLEX WITH DNA AND DTTP organism=Homo sapiens DNA sequence DA(T5):TTP(B902) DG(T6):DOC(P13) DG(T7):DC(P12) DG(T8):DC(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainB ( 8) ASP454 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ASP456 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) CYS457 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) PHE458 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) TYR459 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) GLN479 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) LEU482 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) VAL484 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR485 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR488 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG491 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU498 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LEU519 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASP546 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) GLU547 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) LYS634 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) SER721 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (279) GLU725 0 2 2 0 0 0 0 0 0 0 0 0 0 0 (317) ARG763 0 0 0 0 0 0 6 6 0 0 0 0 0 0 (335) GLN781 0 0 0 0 0 0 0 8 0 0 0 0 0 0 prot.sequence srvivhvdldcfYaqvemisnpelkdkplgvqQkyLvVtcnyearklgvkklmnvrdakekcpqlvlvngedLtryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqSfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssekhygresrQcpipshviqklgtgnydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >1t7p_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=T7 DNA POLYMERASE COMPLEXED TO DNA PRIMER/TEMPLATE,A NUCLEOSIDE TRIPHOSPHATE, AND ITS PROCESSIVITY FACTOR THIOREDOXIN organism=ENTEROBACTERIA PHAGE T7 DNA sequence DG(P12):DC(T15) DC(P13):DG(T14) DC(P14):DG(T13) DA(P15):DT(T12) DG(P16):DC(T11) DT(P17):DA(T10) DG(P18):DC(T9) DC(P19):DG(T8) DC(P20):DG(T7) DA(P21):DT(T6) 2DA(P22):DT(T5) DG3(P23):DC(T4) chainA (363) LYS394 0 0 0 0 0 0 0 5 1 0 0 0 (398) ARG429 0 0 0 0 0 0 0 0 0 1 7 1 (405) ASN436 0 0 0 0 0 0 0 0 1 0 0 0 (408) GLN439 0 0 0 0 0 0 0 7 8 0 0 0 (444) ASP475 0 0 0 0 0 0 0 0 0 0 0 5 (446) SER477 0 0 0 0 0 0 0 0 0 0 0 1 (448) LEU479 0 0 0 0 0 0 0 0 0 0 0 1 (449) GLU480 0 0 0 0 0 0 0 0 0 0 0 1 (473) ASP504 0 0 0 0 0 0 0 0 0 0 0 1 (475) HIS506 0 0 0 0 0 0 0 0 0 0 0 7 (487) ARG518 0 0 0 0 0 0 0 0 0 0 0 6 (491) LYS522 0 0 0 0 0 0 0 0 0 0 0 10 (492) THR523 0 0 0 0 0 0 0 0 0 0 0 4 (495) TYR526 0 0 0 0 0 0 0 0 0 0 0 23 (499) TYR530 0 0 0 0 0 0 0 0 0 0 0 8 (509) ILE540 0 0 0 0 0 0 0 0 0 0 0 1 (569) ASN611 0 0 0 0 0 0 0 0 0 0 1 1 (573) GLN615 0 0 0 0 0 0 0 0 0 0 1 0 (612) ASP654 0 0 0 0 0 0 0 0 0 0 0 5 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkeyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnakTfiygflYgagdekigqIvgagkergkelkkkflentpaiaalresiqqtlvekwkrrwikgldgrkvhvrsphaalNtllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1t8e_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=T7 DNA POLYMERASE TERNARY COMPLEX WITH DCTP AT THE INSERTION SITE. organism=ENTEROBACTERIA PHAGE T7 DNA sequence DC(C1001):DG(D2026) DG(C1002):DC(D2025) DA(C1003):DT(D2024) DA(C1004):DT(D2023) DA(C1005):DT(D2022) DA(C1006):DT(D2021) DC(C1007):DG(D2020) DG(C1008):DC(D2019) DA(C1009):DT(D2018) DC(C1010):DG(D2017) DG(C1011):DC(D2016) DG(C1012):DC(D2015) DC(C1013):DG(D2014) DC(C1014):DG(D2013) DA(C1015):DT(D2012) DG(C1016):DC(D2011) DT(C1017):DA(D2010) DG(C1018):DC(D2009) DC(C1019):DG(D2008) DC(C1020):DG(D2007) DA(C1021):DT(D2006) 2DT(C1022):DA(D2005) DCT(A1023):DG(D2004) chainA (388) LYS394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 (423) ARG429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 1 (430) ASN436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (433) GLN439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 (469) ASP475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (473) LEU479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (474) GLU480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (500) HIS506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (512) ARG518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (516) LYS522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (517) THR523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (520) TYR526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 (524) TYR530 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (526) ALA532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (530) LYS536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (534) ILE540 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (605) ASN611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (609) GLN615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (648) ASP654 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggifkkpknkaqregrepceldtreyvagapytpvehvvfnpssRdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnakTfiYgflYgAgdeKigqIvgagkergkelkkkflentpaiaalresiqqtlvessqwvageqqvkwkrrwikgldgrkvhvrsphaalNtllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1t8i_A:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes;Eukaryotic_DNA_topoisomerase_I,_dispensable_insert_domain; title=HUMAN DNA TOPOISOMERASE I (70 KDA) IN COMPLEX WITH THE POISON CAMPTOTHECIN AND COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX organism=Homo sapiens DNA sequence DC(D112):TGP(C11) DA(D113):DT(B10) DA(D114):DT(B9) DG(D115):DC(B8) DT(D116):DA(B7) DC(D117):DG(B6) DT(D118):DA(B5) DT(D119):DA(B4) DT(D120):DA(B3) DT(D121):DA(B2) DT(D122):DA(B1) chainA (152) ASN352 1 0 0 0 0 0 0 0 0 0 0 (156) GLU356 10 0 0 0 0 0 0 0 0 0 0 (164) ARG364 3 4 0 0 0 0 0 0 0 0 0 (225) LYS425 0 2 0 0 0 0 0 0 0 0 0 (226) TYR426 0 0 0 3 7 0 0 0 0 0 0 (228) MET428 0 0 1 1 0 0 0 0 0 0 0 (236) LYS436 0 0 1 0 0 0 0 0 0 0 0 (291) ASN491 0 0 0 0 0 2 0 0 0 0 0 (332) LYS532 0 6 4 1 0 0 0 0 0 0 0 (522) ASN722 0 4 0 0 0 0 0 0 0 0 0 prot.sequence qkwkwweeerypegikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkeriaNfkiEppglfrgRgnhpkmgmlkrrimpediiincskdakvpspppghkwkevrhdnkvtwlvswteniqgsiKYiMlnpssriKgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNekeegetadtvgccslrvehinlhpeldgqeyvvefdflgKdsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynranravailcnhqrappktfeksmmnlqtkidakkeqladarrdlksakadakvmkdaktkkvveskkkavqrleeqlmklevqatdreenkqialgtsklNldpritvawckkwgvpiekiynktqrekfawaidmadedyef >1t9i_AB:Homing_endonucleases; title=I-CREI(D20N)/DNA COMPLEX organism=Chlamydomonas reinhardtii DNA sequence DG(C501):DC(D574) DC(C502):DG(D573) DA(C503):DT(D572) DA(C504):DT(D571) DA(C505):DT(D570) DA(C506):DT(D569) DC(C507):DG(D568) DG(C508):DC(D567) DT(C509):DA(D566) DC(C510):DG(D565) DG(C511):DC(D564) DT(C512):DA(D563) DG(C513):DC(D562) DA(C514):DT(D561) DG(C515):DC(D560) DA(C516):DT(D559) DC(C517):DG(D558) DA(C518):DT(D557) DG(C519):DC(D556) DT(C520):DA(D555) DT(C521):DA(D554) DT(C522):DA(D553) DC(C523):DG(D552) DG(C524):DC(D551) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 3 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 11 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 7 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 12 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 16 0 0 0 0 0 0 0 0 ( 71) SER72 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 chainB ( 21) SER322 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE324 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN326 0 0 0 0 0 1 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS328 0 0 0 0 2 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN330 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER332 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR333 0 20 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN338 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN344 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR346 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR366 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG368 0 0 0 0 0 0 7 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG370 0 0 0 0 0 0 0 0 17 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) SER372 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL373 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS439 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR440 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgngSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgSVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlds/ntkynkefllylagfvdgngSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgSVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravldsls >1t9i_B:Homing_endonucleases; title=I-CREI(D20N)/DNA COMPLEX organism=Chlamydomonas reinhardtii DNA sequence DG(C501):DC(D574) DC(C502):DG(D573) DA(C503):DT(D572) DA(C504):DT(D571) DA(C505):DT(D570) DA(C506):DT(D569) DC(C507):DG(D568) DG(C508):DC(D567) DT(C509):DA(D566) DC(C510):DG(D565) DG(C511):DC(D564) DT(C512):DA(D563) DG(C513):DC(D562) DA(C514):DT(D561) DG(C515):DC(D560) DA(C516):DT(D559) DC(C517):DG(D558) DA(C518):DT(D557) DG(C519):DC(D556) DT(C520):DA(D555) DT(C521):DA(D554) DT(C522):DA(D553) DC(C523):DG(D552) DG(C524):DC(D551) chainB ( 21) SER322 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE324 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN326 0 0 0 0 0 1 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS328 0 0 0 0 2 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN330 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER332 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR333 0 20 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN338 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN344 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR346 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR366 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG368 0 0 0 0 0 0 7 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG370 0 0 0 0 0 0 0 0 17 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) SER372 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL373 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS439 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR440 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgngSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgSVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravldsls >1t9j_A:Homing_endonucleases; title=I-CREI(Q47E)/DNA COMPLEX organism=Chlamydomonas reinhardtii DNA sequence DC(D551):DG(C524) DG(D552):DC(C523) DA(D553):DT(C522) DA(D554):DT(C521) DA(D555):DT(C520) DC(D556):DG(C519) DT(D557):DA(C518) DG(D558):DC(C517) DT(D559):DA(C516) DC(D560):DG(C515) DT(D561):DA(C514) DC(D562):DG(C513) DA(D563):DT(C512) DC(D564):DG(C511) DG(D565):DC(C510) DA(D566):DT(C509) DC(D567):DG(C508) DG(D568):DC(C507) DT(D569):DA(C506) DT(D570):DA(C505) DT(D571):DA(C504) DT(D572):DA(C503) DG(D573):DC(C502) DC(D574):DG(C501) chainA ( 20) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE24 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN26 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS28 0 0 0 0 3 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASN30 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER32 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR33 0 14 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN38 0 0 4 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN44 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR46 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) TYR66 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG68 0 0 0 0 0 0 8 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG70 0 0 0 0 0 0 0 0 15 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL73 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 (137) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) THR140 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >1t9j_AB:Homing_endonucleases; title=I-CREI(Q47E)/DNA COMPLEX organism=Chlamydomonas reinhardtii DNA sequence DG(C501):DC(D574) DC(C502):DG(D573) DA(C503):DT(D572) DA(C504):DT(D571) DA(C505):DT(D570) DA(C506):DT(D569) DC(C507):DG(D568) DG(C508):DC(D567) DT(C509):DA(D566) DC(C510):DG(D565) DG(C511):DC(D564) DT(C512):DA(D563) DG(C513):DC(D562) DA(C514):DT(D561) DG(C515):DC(D560) DA(C516):DT(D559) DC(C517):DG(D558) DA(C518):DT(D557) DG(C519):DC(D556) DT(C520):DA(D555) DT(C521):DA(D554) DT(C522):DA(D553) DC(C523):DG(D552) DG(C524):DC(D551) chainA ( 20) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 22) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 24) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 ( 26) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 3 0 0 0 0 ( 28) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 30) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 31) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 14 0 ( 36) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 4 0 0 ( 42) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 ( 44) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 ( 64) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 66) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 8 0 0 0 0 0 0 ( 68) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 15 0 0 0 0 0 0 0 0 ( 71) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (137) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (138) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 chainB ( 20) SER322 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE324 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN326 0 0 0 0 0 1 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS328 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASN330 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER332 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR333 0 17 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN338 0 0 8 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN344 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR346 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) TYR366 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG368 0 0 0 0 0 0 9 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG370 0 0 0 0 0 0 0 0 18 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL373 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 (137) LYS439 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) THR440 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >1tau_A:DNA/RNA_polymerases;PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain;Ribonuclease_H-like; title=TAQ POLYMERASE (E.C.2.7.7.7)/DNA/B-OCTYLGLUCOSIDE COMPLEX organism=Thermus aquaticus DNA sequence DG(T901):DC(P951) DC(T902):DG(P952) DG(T903):DC(P953) DA(T904):DT(P954) DT(T905):DA(P955) DC(T906):DG(P956) DC(T907):DG(P957) DG(T908):DC(P958) chainA (541) ASN580 0 0 0 1 0 0 0 0 (544) ASN583 0 0 10 11 0 0 0 0 (628) PHE667 5 0 0 0 0 0 0 0 (632) TYR671 53 0 0 0 0 0 0 0 (638) ARG677 14 0 0 0 0 0 0 0 (707) ARG746 8 4 0 0 0 0 0 0 (711) ASN750 1 0 0 0 0 0 0 0 (715) GLN754 4 0 0 0 0 0 0 0 prot.sequence pkgrvllvdghhlayrtfhalkglttsrgepvqavygfaksllkalkedgdavivvfdaraptpedfprqlalikelvdllglarlevpgyeaddvlaslakkaekegyevriltadkdlyqllsdrihvlhpegylitpawlwekyglrpdqwadyraltgdesdnlpgvkgigektarklleewgsleallknldrlkpairekilahmddlklswdlakvrtdlplevdfakrrepdrerlraflerlefgsllhefgllespkaleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelstsaavlealreahpivekilqyreltklkstyidplpdlihprtgrlhtrfnqtatatgrlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinFgvlYgmsahRlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaeRmafNmpvQgtaadlmklamvklfprleemgarmllqvhdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >1tc3_C:Homeodomain-like; title=TRANSPOSASE TC3A1-65 FROM CAENORHABDITIS ELEGANS organism=Caenorhabditis elegans DNA sequence DG(A2):DC(B119) DG(A3):DC(B118) DG(A4):DC(B117) DG(A5):DC(B116) DG(A6):DC(B115) DG(A7):DC(B114) DG(A8):DC(B113) DT(A9):DA(B112) DC(A10):DG(B111) DC(A11):DG(B110) DT(A12):DA(B109) DA(A13):DT(B108) DT(A14):DA(B107) DA(A15):DT(B106) DG(A16):DC(B105) DA(A17):DT(B104) DA(A18):DT(B103) DC(A19):DG(B102) DT(A20):DA(B101) chainC ( 1) PRO202 0 0 0 0 0 0 0 0 0 0 4 7 6 4 0 0 0 0 0 ( 2) ARG203 0 0 0 0 0 0 0 0 0 5 18 10 0 0 0 0 0 0 0 ( 25) HIS226 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER235 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 35) ARG236 0 0 0 0 0 9 15 2 0 0 0 0 0 0 0 0 0 0 0 ( 36) HIS237 0 0 0 0 0 0 0 0 23 15 9 0 0 0 0 0 0 0 0 ( 39) ARG240 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence PRgsalsdteraqldvmkllnvslHemsrkisrSRHciRvylkdpvsygts >1tdz_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE COMPLEX BETWEEN THE LACTOCOCCUS LACTIS FPG (MUTM) AND A FAPY-DG CONTAINING DNA organism=Lactococcus lactis DNA sequence DT(B2):DA(C28) DC(B3):DG(C27) DT(B4):DA(C26) DT(B5):DA(C25) DT(B6):DA(C24) FOX(B7):DC(C23) DT(B8):DA(C22) DT(B9):DA(C21) DT(B10):DA(C20) DC(B11):DG(C19) DT(B12):DA(C18) DC(B13):DG(C17) DG(B14):DC(C16) chainA ( 4) GLU5 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 0 0 0 6 4 0 0 0 0 0 ( 74) MET75 0 0 0 0 0 0 11 0 0 0 0 0 0 (108) ARG109 0 0 0 0 70 15 1 0 0 0 0 0 0 (110) PHE111 0 0 0 0 0 11 36 0 0 0 0 0 0 (171) ILE172 0 0 0 0 0 5 0 0 0 0 0 0 0 (216) SER217 0 0 0 0 0 1 0 0 0 0 0 0 0 (218) ILE219 0 0 0 0 0 13 0 0 0 0 0 0 0 (254) ARG260 0 0 0 0 0 0 6 1 0 0 0 0 0 prot.sequence elpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssilgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >1tez_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=COMPLEX BETWEEN DNA AND THE DNA PHOTOLYASE FROM ANACYSTIS NIDULANS organism=SYNECHOCOCCUS ELONGATUS DNA sequence DA(J9):DT(I7) DG(J10):DC(I6) DC(J11):DG(I5) DC(J12):DG(I4) DG(J13):DC(I3) DA(J14):DT(I2) chainA (231) ARG232 1 0 0 0 0 0 (282) GLU283 10 0 0 0 0 0 (285) TRP286 41 0 0 0 0 0 (289) TYR290 2 0 0 0 0 0 (401) PRO402 12 0 0 0 0 0 prot.sequence aapilfwhrrdlrlsdniglaaaraqsaqliglfcldpqilqsadmaparvaylqgclqelqqryqqagsrllllqgdpqhlipqlaqqlqaeavywnqdiepygrdrdgqvaaalktagiravqlwdqllhspdqilsgsgnpysvygpfwknwqaqpkptpvatptelvdlspeqltaiaplllselptlkqlgfdwdggfpvepgetaaiarlqefcdraiadydpqRnfpaeagtsglspalkfgaigirqawqaasaahalsrsdearnsirvwqqElaWrefYqhalyhfpsladgpyrslwqqfpwenrealftawtqaqtgypivdaamrqltetgwmhnrcrmivasfltkdliidwrrgeqffmqhlvdgdlaannggwqwsassgmdpkPlrifnpasqakkfdatatyikrwlpelrhvhpkdlisgeitpierrgypapivnhnlrqkqfkalynqlkaai >1tf3_A:beta-beta-alpha_zinc_fingers; title=TFIIIA FINGER 1-3 BOUND TO DNA, NMR, 22 STRUCTURES organism=XENOPUS LAEVIS DNA sequence DT(E1):DA(F30) DT(E2):DA(F29) DG(E3):DC(F28) DG(E4):DC(F27) DA(E5):DT(F26) DT(E6):DA(F25) DG(E7):DC(F24) DG(E8):DC(F23) DG(E9):DC(F22) DA(E10):DT(F21) DG(E11):DC(F20) DA(E12):DT(F19) DC(E13):DG(F18) DC(E14):DG(F17) DG(E15):DC(F16) chainA ( 16) ASN25 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 17) LYS26 0 0 0 0 0 0 0 0 0 0 0 7 12 4 0 ( 19) TRP28 0 0 0 0 0 0 0 0 6 4 4 4 0 0 0 ( 20) LYS29 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 49) HIS58 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 ( 50) HIS59 0 0 0 0 0 0 0 18 11 0 0 0 0 0 0 ( 53) ARG62 0 0 0 0 0 23 14 3 0 0 0 0 0 0 0 ( 76) THR85 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 77) THR86 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 79) ALA88 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 80) ASN89 0 0 0 10 11 0 0 0 0 0 0 0 0 0 0 ( 83) LYS92 0 0 4 2 6 0 0 0 0 0 0 0 0 0 0 ( 87) ARG96 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkryicsfadcgaaynknwklqahlskhtgekpfpckeegcekgftslhHltRhslthtgeknftcdsdgcdlrfttkaNmkkhfnRfhnik >1tf6_A:C2H2_and_C2HC_zinc_fingers; title=CO-CRYSTAL STRUCTURE OF XENOPUS TFIIIA ZINC FINGER DOMAIN BOUND TO THE 5S RIBOSOMAL RNA GENE INTERNAL CONTROL REGION organism=Xenopus laevis DNA sequence DG(C34):DC(B31) DG(C35):DC(B30) DT(C36):DA(B29) DC(C37):DG(B28) DT(C38):DA(B27) DC(C39):DG(B26) DC(C40):DG(B25) DC(C41):DG(B24) DA(C42):DT(B23) DT(C43):DA(B22) DC(C44):DG(B21) DC(C45):DG(B20) DA(C46):DT(B19) DG(C47):DC(B18) DG(C48):DC(B17) DT(C49):DA(B16) DA(C50):DT(B15) DC(C51):DG(B14) DT(C52):DA(B13) DA(C53):DT(B12) DA(C54):DT(B11) DC(C55):DG(B10) DC(C56):DG(B9) DA(C57):DT(B8) DG(C58):DC(B7) DG(C59):DC(B6) DC(C60):DG(B5) DC(C61):DG(B4) DC(C62):DG(B3) DG(C63):DC(B2) chainA ( 17) LYS26 10 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TRP28 0 0 5 6 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LYS29 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) HIS58 0 0 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) HIS59 0 0 0 0 0 1 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG62 0 0 0 0 0 0 6 9 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) THR86 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ALA88 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ASN89 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS92 0 0 0 0 0 0 0 0 0 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG96 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) LEU148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (141) SER150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 (142) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 2 0 0 0 0 0 0 0 (145) ARG154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 9 0 0 0 0 0 0 prot.sequence ykryicsfadcgaaynKnwklqahlckhtgekpfpckeegcekgftslHHltRhslthtgeknftcdsdgcdlrfttkaNmkKhfnrfhnikicvyvchfencgkafkkhnqlkvhqfshtqqlpyecphegcdkrfslpsRlkRhekvhagypckkddscsfvgktwtlylkhvaech >1tgh_A:TATA-box_binding_protein-like; title=TATA BINDING PROTEIN (TBP)/DNA COMPLEX organism=HOMO SAPIENS DNA sequence DC(C113):DG(B112) DG(C114):DC(B111) DT(C115):DA(B110) DA(C116):DT(B109) DT(C117):DA(B108) DA(C118):DT(B107) DT(C119):DA(B106) DA(C120):DT(B105) DT(C121):DA(B104) DA(C122):DT(B103) DC(C123):DG(B102) DG(C124):DC(B101) chainA ( 9) ASN163 0 0 0 0 0 6 8 0 0 0 0 0 ( 11) VAL165 0 0 0 0 2 5 0 0 0 0 0 0 ( 39) PHE193 0 0 16 37 0 0 0 0 0 0 0 0 ( 54) LEU208 0 0 0 7 5 0 0 0 0 0 0 0 ( 56) PHE210 0 0 0 6 0 0 0 0 0 0 0 0 ( 62) VAL216 0 0 0 4 5 0 0 0 0 0 0 0 ( 64) THR218 0 0 0 0 2 1 0 0 0 0 0 0 ( 99) ASN253 0 0 0 0 0 9 6 0 0 0 0 0 (101) VAL255 0 0 0 0 0 0 6 2 0 0 0 0 (130) PHE284 0 0 0 0 0 0 0 0 22 15 0 0 (131) PRO285 0 0 0 0 0 0 0 0 0 6 0 0 (145) LEU299 0 0 0 0 0 0 0 5 0 0 0 0 (147) PHE301 0 0 0 0 0 0 0 0 7 0 0 0 (153) VAL307 0 0 0 0 0 0 0 5 0 0 0 0 (155) THR309 0 0 0 0 0 0 6 3 0 0 0 0 prot.sequence sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrkt >1tk0_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=T7 DNA POLYMERASE TERNARY COMPLEX WITH 8 OXO GUANOSINE AND DDCTP AT THE INSERTION SITE organism=ENTEROBACTERIA PHAGE T7 DNA sequence DT(T856):DA(P821) DG(T857):DC(P820) DG(T858):DC(P819) DC(T859):DG(P818) DA(T860):DT(P817) DC(T861):DG(P816) DT(T862):DA(P815) DG(T863):DC(P814) DG(T864):DC(P813) DC(T865):DG(P812) DC(T866):DG(P811) DG(T867):DC(P810) chainA (382) LYS394 0 0 6 1 0 0 0 0 0 0 0 0 (417) ARG429 1 0 0 0 0 0 0 0 0 0 0 0 (424) ASN436 0 1 0 0 0 0 0 0 0 0 0 0 (427) GLN439 0 8 8 0 0 0 0 0 0 0 0 0 (597) GLN615 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggifkkpegrepceldtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflygagdekigqivgagkergkelkkkflentpaiaalresiqqtlvessqqvkwkrrwikgldgrkvhvrsphaalNtllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1tk5_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=T7 DNA POLYMERASE BINARY COMPLEX WITH 8 OXO GUANOSINE IN THE TEMPLATING STRAND organism=ENTEROBACTERIA PHAGE T7 DNA sequence DC(T855):DDG(P822) DT(T856):DA(P821) DG(T857):DC(P820) DG(T858):DC(P819) DC(T859):DG(P818) DA(T860):DT(P817) DC(T861):DG(P816) DT(T862):DA(P815) DG(T863):DC(P814) DG(T864):DC(P813) DC(T865):DG(P812) chainA (384) LYS394 0 0 0 5 2 0 0 0 0 0 0 (419) ARG429 11 1 0 0 0 0 0 0 0 0 0 (426) ASN436 0 0 1 0 0 0 0 0 0 0 0 (429) GLN439 0 0 8 8 0 0 0 0 0 0 0 (520) TYR530 33 0 0 0 0 0 0 0 0 0 0 (592) GLN615 2 0 0 0 0 0 0 0 0 0 0 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggifkkpkaqregrceldtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflYgaigqivgagkergkelkkkflentpaiaalresiqqtlvesvkwkrrwikgldgrkvhvrsphaalntllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1tk8_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=T7 DNA POLYMERASE TERNARY COMPLEX WITH 8 OXO GUANOSINE AND DAMP AT THE ELONGATION SITE organism=ENTEROBACTERIA PHAGE T7 DNA sequence DA(P806):DT(T871) DC(P807):DG(T870) DG(P808):DC(T869) DA(P809):DT(T868) DC(P810):DG(T867) DG(P811):DC(T866) DG(P812):DC(T865) DC(P813):DG(T864) DC(P814):DG(T863) DA(P815):DT(T862) DG(P816):DC(T861) DT(P817):DA(T860) DG(P818):DC(T859) DC(P819):DG(T858) DC(P820):DG(T857) DA(P821):DT(T856) chainA (111) ARG111 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (388) LYS394 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 (423) ARG429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (430) ASN436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (433) GLN439 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 (603) GLN615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllRsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggifkkpknkaqregrepceldtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflygagdekigqivgagkergkelkkkflentpaiaalresiqqtlvessqqvkwkrrwikgldgrkvhvrsphaalntllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1tkd_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=T7 DNA POLYMERASE TERNARY COMPLEX WITH 8 OXO GUANOSINE AND DCMP AT THE ELONGATION SITE organism=ENTEROBACTERIA PHAGE T7 DNA sequence DT(T856):DA(P821) DG(T857):DC(P820) DG(T858):DC(P819) DC(T859):DG(P818) DA(T860):DT(P817) DC(T861):DG(P816) DT(T862):DA(P815) DG(T863):DC(P814) DG(T864):DC(P813) DC(T865):DG(P812) DC(T866):DG(P811) DG(T867):DC(P810) DT(T868):DA(P809) DC(T869):DG(P808) DG(T870):DC(P807) chainA (111) ARG111 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (388) LYS394 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 (423) ARG429 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (430) ASN436 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (433) GLN439 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 (609) GLN615 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllRsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggifkkpknkaqregrepceldtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflygagdekigqivgagkergkelkkkflentpaiaalresiqqtlvessqwvageqqvkwkrrwikgldgrkvhvrsphaalntllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1tl8_A:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes;Eukaryotic_DNA_topoisomerase_I,_dispensable_insert_domain; title=HUMAN DNA TOPOISOMERASE I (70 KDA) IN COMPLEX WITH THE INDENOISOQUINOLINE AI-III-52 AND COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX organism=Homo sapiens DNA sequence DA(B1):DT(D122) DA(B2):DT(D121) DA(B3):DT(D120) DA(B4):DT(D119) DA(B5):DT(D118) DG(B6):DC(D117) DA(B7):DT(D116) DC(B8):DG(D115) DT(B9):DA(D114) DT(B10):DA(D113) TPC(C11):DG(D112) chainA (156) GLU356 0 0 0 0 0 0 0 0 0 0 5 (164) ARG364 0 0 0 0 0 0 0 0 0 3 7 (224) ILE424 0 0 0 0 0 1 0 0 0 0 0 (226) TYR426 0 0 0 0 0 0 8 3 0 0 0 (228) MET428 0 0 0 0 0 0 0 1 1 0 0 (236) LYS436 0 0 0 0 0 0 0 0 1 0 0 (291) ASN491 0 0 0 0 0 3 0 0 0 0 0 (332) LYS532 0 0 0 0 0 0 0 0 3 5 0 (522) ASN722 0 0 0 0 0 0 0 0 0 4 0 prot.sequence qkwkwweeerypegikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffakmldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmskeeklkikeenekllkeygfcimdnhkerianfkiEppglfrgRgnhpkmgmlkrrimpediiincskdakvpspppghkwkevrhdnkvtwlvswteniqgsIkYiMlnpssriKgekdwqkyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragNekeegetadtvgccslrvehinlhpeldgqeyvvefdflgKdsiryynkvpvekrvfknlqlfmenkqpeddlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynranravailcnhqrappktfeksmmnlqtkidakkeqladarrdlksakadakvmkdaktkkvveskkkavqrleeqlmklevqatdreenkqialgtsklNldpritvawckkwgvpiekiynktqrekfawaidmadedyef >1tn9_A:DNA-binding_domain; title=THE SOLUTION STRUCTURE OF TN916 INTEGRASE N-TERMINAL DOMAIN/DNA COMPLEX organism=ENTEROCOCCUS FAECALIS DNA sequence DG(B101):DC(C126) DA(B102):DT(C125) DG(B103):DC(C124) DT(B104):DA(C123) DA(B105):DT(C122) DG(B106):DC(C121) DT(B107):DA(C120) DA(B108):DT(C119) DA(B109):DT(C118) DA(B110):DT(C117) DT(B111):DA(C116) DT(B112):DA(C115) DC(B113):DG(C114) chainA ( 18) ARG20 0 0 0 0 14 11 1 0 0 0 0 0 0 ( 19) LYS21 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 22) ARG24 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 24) LEU26 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 26) LYS28 0 0 14 8 4 0 0 0 0 0 0 0 0 ( 28) ILE30 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) PRO36 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 36) PHE38 0 0 0 3 9 24 0 0 0 0 0 0 0 ( 38) TYR40 0 0 0 0 0 1 14 4 0 0 0 0 0 ( 53) ARG55 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence ekrrdnrgrilktgesqRKdgRyLyKyIdsfgePqFvYswklvatdrvpagkRdaislrekiaelqkdi >1tqe_PQ:SRF-like; title=MECHANISM OF RECRUITMENT OF CLASS II HISTONE DEACETYLASES BY MYOCYTE ENHANCER FACTOR-2 organism=HOMO SAPIENS DNA sequence DA(C3):DT(D16) DG(C4):DC(D15) DC(C5):DG(D14) DT(C6):DA(D13) DA(C7):DT(D12) DT(C8):DA(D11) DT(C9):DA(D10) DT(C10):DA(D9) DA(C11):DT(D8) DT(C12):DA(D7) DA(C13):DT(D6) DA(C14):DT(D5) DG(C15):DC(D4) DC(C16):DG(D3) chainP ( 2) ARG3 0 0 0 0 0 0 0 0 0 7 12 4 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 7 6 0 0 chainQ ( 2) ARG3 0 0 10 13 2 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 1 5 7 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr/gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr >1tqe_RS:SRF-like; title=MECHANISM OF RECRUITMENT OF CLASS II HISTONE DEACETYLASES BY MYOCYTE ENHANCER FACTOR-2 organism=HOMO SAPIENS DNA sequence DA(E2):DT(F17) DA(E3):DT(F16) DG(E4):DC(F15) DC(E5):DG(F14) DT(E6):DA(F13) DA(E7):DT(F12) DT(E8):DA(F11) DT(E9):DA(F10) DT(E10):DA(F9) DA(E11):DT(F8) DT(E12):DA(F7) DA(E13):DT(F6) DA(E14):DT(F5) DG(E15):DC(F4) DC(E16):DG(F3) chainR ( 2) ARG3 0 0 0 0 0 0 0 0 0 0 6 12 3 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 chainS ( 2) ARG3 0 0 0 10 13 2 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 1 5 7 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr/gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr >1tqe_S:SRF-like; title=MECHANISM OF RECRUITMENT OF CLASS II HISTONE DEACETYLASES BY MYOCYTE ENHANCER FACTOR-2 organism=HOMO SAPIENS DNA sequence DA(E2):DT(F17) DA(E3):DT(F16) DG(E4):DC(F15) DC(E5):DG(F14) DT(E6):DA(F13) DA(E7):DT(F12) DT(E8):DA(F11) DT(E9):DA(F10) DT(E10):DA(F9) DA(E11):DT(F8) DT(E12):DA(F7) DA(E13):DT(F6) DA(E14):DT(F5) DG(E15):DC(F4) DC(E16):DG(F3) chainS ( 2) ARG3 0 0 0 10 13 2 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 1 5 7 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr >1tro_AG:TrpR-like; title=CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTION organism=ESCHERICHIA COLI STR. K12 SUBSTR. DNA sequence DG(J2):DC(I19) DT(J3):DA(I18) DA(J4):DT(I17) DC(J5):DG(I16) DT(J6):DA(I15) DA(J7):DT(I14) DG(J8):DC(I13) DT(J9):DA(I12) DT(J10):DA(I11) DA(J11):DT(I10) DA(J12):DT(I9) DC(J13):DG(I8) DT(J14):DA(I7) DA(J15):DT(I6) DG(J16):DC(I5) DT(J17):DA(I4) DA(J18):DT(I3) DC(J19):DG(I2) DT(L1):DT(I1) DG(L2):DC(K19) DT(L3):DA(K18) DA(L4):DT(K17) DC(L5):DG(K16) DT(L6):DA(K15) DA(L7):DT(K14) DG(L8):DC(K13) DT(L9):DA(K12) DT(L10):DA(K11) DA(L11):DT(K10) DA(L12):DT(K9) DC(L13):DG(K8) DT(L14):DA(K7) DA(L15):DT(K6) DG(L16):DC(K5) DT(L17):DA(K4) DA(L18):DT(K3) DC(L19):DG(K2) chainA ( 64) GLN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) THR81 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) THR83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 64) GLN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) THR81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spysaamaeerhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelKnelgagIATiTrgsnslkaapvelrqwleevllksd/spysaamaeerhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelKnelgagIATiTrgsnslkaapvelrqwleevll >1tro_C:TrpR-like; title=CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTION organism=? DNA sequence DG(J2):DC(I19) DT(J3):DA(I18) DA(J4):DT(I17) DC(J5):DG(I16) DT(J6):DA(I15) DA(J7):DT(I14) DG(J8):DC(I13) DT(J9):DA(I12) DT(J10):DA(I11) DA(J11):DT(I10) DA(J12):DT(I9) DC(J13):DG(I8) DT(J14):DA(I7) DA(J15):DT(I6) DG(J16):DC(I5) DT(J17):DA(I4) DA(J18):DT(I3) DC(J19):DG(I2) chainC ( 59) GLN68 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG69 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ILE79 0 2 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ALA80 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR81 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) THR83 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence amaeerhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelKnelgagIATiTrgsnslkaapvelrqwleevllksd >1trr_A:TrpR-like; title=TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEX organism=ESCHERICHIA COLI DNA sequence DA(I2):DT(C17) DG(I3):DC(C16) DC(I4):DG(C15) DG(I5):DC(C14) DT(I6):DA(C13) DA(I7):DT(C12) DC(I8):DG(C11) DT(I9):DA(C10) DA(I10):DT(C9) DG(I11):DC(C8) DT(I12):DA(C7) DA(I13):DT(C6) DC(I14):DG(C5) DG(I15):DC(C4) DC(I16):DG(C3) DT(I17):DA(C2) chainA ( 1) ALA2 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 ( 67) GLN68 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG69 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ILE79 0 0 0 0 4 2 5 0 0 0 0 0 0 0 0 0 ( 79) ALA80 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 ( 80) THR81 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 82) THR83 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 ( 83) ARG84 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence AqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelknelgagIATiTRgsnslkaapvelrqwleevll >1trr_AB:TrpR-like; title=TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEX organism=ESCHERICHIA COLI DNA sequence DA(C2):DT(I17) DG(C3):DC(I16) DC(C4):DG(I15) DG(C5):DC(I14) DT(C6):DA(I13) DA(C7):DT(I12) DC(C8):DG(I11) DT(C9):DA(I10) DA(C10):DT(I9) DG(C11):DC(I8) DT(C12):DA(I7) DA(C13):DT(I6) DC(C14):DG(I5) DG(C15):DC(I4) DC(C16):DG(I3) DT(C17):DA(I2) chainA ( 1) ALA2 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) GLN68 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 68) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 ( 78) ILE79 0 0 0 0 0 0 0 0 0 5 2 4 0 0 0 0 ( 79) ALA80 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 ( 80) THR81 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 82) THR83 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 83) ARG84 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainB ( 79) ALA80 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR81 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence AqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelknelgagIATiTRgsnslkaapvelrqwleevll/aqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsqrelknelgagiATitrgsnslkaapvelrqwleevll >1trr_DEGH:TrpR-like; title=TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEX organism=ESCHERICHIA COLI DNA sequence DA(L2):DT(F17) DG(L3):DC(F16) DC(L4):DG(F15) DG(L5):DC(F14) DT(L6):DA(F13) DA(L7):DT(F12) DC(L8):DG(F11) DT(L9):DA(F10) DA(L10):DT(F9) DG(L11):DC(F8) DT(L12):DA(F7) DA(L13):DT(F6) DC(L14):DG(F5) DG(L15):DC(F4) DC(L16):DG(F3) DT(L17):DA(F2) DA(I2):DT(C17) DG(I3):DC(C16) DC(I4):DG(C15) DG(I5):DC(C14) DT(I6):DA(C13) DA(I7):DT(C12) DC(I8):DG(C11) DT(I9):DA(C10) DA(I10):DT(C9) DG(I11):DC(C8) DT(I12):DA(C7) DA(I13):DT(C6) DC(I14):DG(C5) DG(I15):DC(C4) DC(I16):DG(C3) DT(I17):DA(C2) chainD ( 1) ALA2 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) GLN68 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG69 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ILE79 0 0 0 0 4 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ALA80 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR81 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) THR83 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG84 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 67) GLN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 20 9 0 0 0 0 0 0 0 0 0 0 ( 71) LYS72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) THR83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) ALA2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) GLN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 68) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 ( 78) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 5 0 0 0 0 ( 79) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 ( 80) THR81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 82) THR83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 83) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainH ( 68) ARG69 0 0 0 0 0 0 0 0 0 0 12 21 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LYS72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 1 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence AqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelknelgagIATiTRgsnslkaapvelrqwleevll/aqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelKnelgagIATiTrgsnslkaapvelrqwleevll/AqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelknelgagIATiTRgsnslkaapvelrqwleevll/aqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsqRelKnelgagIATitrgsnslkaapvelrqwleevll >1trr_JK:TrpR-like; title=TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEX organism=ESCHERICHIA COLI DNA sequence DA(F2):DT(L17) DG(F3):DC(L16) DC(F4):DG(L15) DG(F5):DC(L14) DT(F6):DA(L13) DA(F7):DT(L12) DC(F8):DG(L11) DT(F9):DA(L10) DA(F10):DT(L9) DG(F11):DC(L8) DT(F12):DA(L7) DA(F13):DT(L6) DC(F14):DG(L5) DG(F15):DC(L4) DC(F16):DG(L3) DT(F17):DA(L2) chainJ ( 1) ALA2 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 ( 67) GLN68 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG69 0 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ILE79 0 0 0 0 5 2 5 0 0 0 0 0 0 0 0 0 ( 79) ALA80 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 ( 80) THR81 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 82) THR83 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG84 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainK ( 79) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 80) THR81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence AqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelknelgagIATiTRgsnslkaapvelrqwleevll/aqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsqrelknelgagiATitrgsnslkaapvelrqwleevll >1tsr_B:p53-like_transcription_factors; title=P53 CORE DOMAIN IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DT(E2):DA(F21) DT(E3):DA(F20) DC(E4):DG(F19) DC(E5):DG(F18) DT(E6):DA(F17) DA(E7):DT(F16) DG(E8):DC(F15) DA(E9):DT(F14) DC(E10):DG(F13) DT(E11):DA(F12) DT(E12):DA(F11) DG(E13):DC(F10) DC(E14):DG(F9) DC(E15):DG(F8) DC(E16):DG(F7) DA(E17):DT(F6) DA(E18):DT(F5) DT(E19):DA(F4) DT(E20):DA(F3) DA(E21):DT(F2) chainB ( 25) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 7 11 13 0 0 0 0 0 (153) ARG248 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (181) ALA276 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 0 0 0 0 0 0 10 14 7 0 0 0 0 0 0 0 prot.sequence svpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenl >1tsr_BC: title=P53 CORE DOMAIN IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DT(E2):DA(F21) DT(E3):DA(F20) DC(E4):DG(F19) DC(E5):DG(F18) DT(E6):DA(F17) DA(E7):DT(F16) DG(E8):DC(F15) DA(E9):DT(F14) DC(E10):DG(F13) DT(E11):DA(F12) DT(E12):DA(F11) DG(E13):DC(F10) DC(E14):DG(F9) DC(E15):DG(F8) DC(E16):DG(F7) DA(E17):DT(F6) DA(E18):DT(F5) DT(E19):DA(F4) DT(E20):DA(F3) DA(E21):DT(F2) chainB ( 25) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 7 11 13 0 0 0 0 0 (153) ARG248 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (181) ALA276 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 0 0 0 0 0 0 10 14 7 0 0 0 0 0 0 0 chainC (186) ARG280 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence svpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenl/ssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenl >1ttu_A:DNA-binding_protein_LAG-1_CSL;p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF CSL BOUND TO DNA organism=Caenorhabditis elegans DNA sequence DT(C3):DA(B15) DC(C4):DG(B14) DT(C5):DA(B13) DT(C6):DA(B12) DT(C7):DA(B11) DC(C8):DG(B10) DC(C9):DG(B9) DC(C10):DG(B8) DA(C11):DT(B7) DC(C12):DG(B6) DA(C13):DT(B5) DG(C14):DC(B4) DT(C15):DA(B3) chainA ( 35) TYR229 0 0 0 0 11 1 0 0 0 0 0 0 0 ( 38) GLU232 0 0 0 0 0 0 0 1 3 0 0 0 0 ( 40) ARG234 0 0 0 0 0 0 2 12 12 0 0 0 0 (142) SER367 0 0 0 4 2 0 0 0 0 0 0 0 0 (143) LYS368 0 0 0 2 12 10 1 0 0 0 0 0 0 (175) SER400 0 0 0 0 0 0 0 0 2 1 0 0 0 (176) GLN401 0 0 0 0 0 0 0 0 0 4 5 1 0 prot.sequence vqsltsdrmidflsnkekyecvisifhakvaqksYgnEkRffcpppciyligqgwklkkdrvaqlykteqqatelvayigigsdtserqqldfpniydycaaktlyisdsdkrkyfdlnaqffygcgmeiggfvsqrikviSKpskkkqsmkntdckylciasgtkvalfnrlrSQtvstrylhvegnafhasstkwgaftihlfdderglqetdnfavrdgfvyygsvvklvdsvtgialprlrirkvdkqqvildascseepvsqlhkcafqmidnelvylclshdkiiqhqatainehrhqindgaawtiistdkaeyrffeamgqvanpispcpvvgslevdghgeasrvelhgrdfkpnlkvwfgatpvettfrseeslhcsippvsqvrneqthwmftnrttgdvevpislvrddgvvyssgltfsyks >1tup_B:p53-like_transcription_factors; title=TUMOR SUPPRESSOR P53 COMPLEXED WITH DNA organism=Homo sapiens DNA sequence DT(F1102):DA(E1021) DA(F1103):DT(E1020) DA(F1104):DT(E1019) DT(F1105):DA(E1018) DT(F1106):DA(E1017) DG(F1107):DC(E1016) DG(F1108):DC(E1015) DG(F1109):DC(E1014) DC(F1110):DG(E1013) DA(F1111):DT(E1012) DA(F1112):DT(E1011) DG(F1113):DC(E1010) DT(F1114):DA(E1009) DC(F1115):DG(E1008) DT(F1116):DA(E1007) DA(F1117):DT(E1006) DG(F1118):DC(E1005) DG(F1119):DC(E1004) DA(F1120):DT(E1003) DA(F1121):DT(E1002) chainB ( 25) LYS120 0 0 0 0 0 13 13 7 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG248 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (181) ALA276 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 0 0 0 7 14 10 0 0 0 0 0 0 0 0 0 0 prot.sequence svpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenl >1tup_BC: title=TUMOR SUPPRESSOR P53 COMPLEXED WITH DNA organism=Homo sapiens DNA sequence DT(F1102):DA(E1021) DA(F1103):DT(E1020) DA(F1104):DT(E1019) DT(F1105):DA(E1018) DT(F1106):DA(E1017) DG(F1107):DC(E1016) DG(F1108):DC(E1015) DG(F1109):DC(E1014) DC(F1110):DG(E1013) DA(F1111):DT(E1012) DA(F1112):DT(E1011) DG(F1113):DC(E1010) DT(F1114):DA(E1009) DC(F1115):DG(E1008) DT(F1116):DA(E1007) DA(F1117):DT(E1006) DG(F1118):DC(E1005) DG(F1119):DC(E1004) DA(F1120):DT(E1003) DA(F1121):DT(E1002) chainB ( 25) LYS120 0 0 0 0 0 13 13 7 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG248 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (181) ALA276 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 0 0 0 7 14 10 0 0 0 0 0 0 0 0 0 0 chainC (186) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence svpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenl/ssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenl >1tv9_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA CONTAINING A MISMATCHED TEMPLATE ADENINE AND INCOMING CYTIDINE organism=Homo sapiens DNA sequence DG(T7):DC(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (230) LYS234 0 1 5 0 0 0 0 0 0 0 (267) TYR271 1 0 0 0 0 0 0 0 0 0 prot.sequence kapqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1tva_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA CONTAINING A MISMATCHED TEMPLATE THYMIDINE AND INCOMING CYTIDINE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 30) HIS34 35 0 0 0 0 ( 31) LYS35 9 0 0 0 0 ( 34) ALA38 5 0 0 0 0 prot.sequence kapqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1tw8_ABCD:Restriction_endonuclease-like; title=HINCII BOUND TO CA2+ AND COGNATE DNA GTCGAC organism=Haemophilus influenzae DNA sequence DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DC(F7):DG(E8) DG(F8):DC(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(G1):DC(E2) DC(G2):DG(E1) DC(G3):DG(H12) DG(G4):DC(H11) DG(G5):DC(H10) DT(G6):DA(H9) DC(G7):DG(H8) DG(G8):DC(H7) DA(G9):DT(H6) DC(G10):DG(H5) DC(G11):DG(H4) DG(G12):DC(H3) chainA ( 30) HIS31 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLN109 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ASN110 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER136 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) GLN138 0 0 0 0 0 0 0 24 41 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) PRO140 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) ASN141 0 0 0 0 3 7 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) TYR199 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASN201 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ALA203 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ALA204 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ALA205 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) GLN207 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN209 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 30) HIS31 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLN109 0 0 0 0 0 5 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER136 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) GLN138 0 42 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) PRO140 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) ASN141 0 0 0 16 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) TYR199 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASN201 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ALA203 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ALA204 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ALA205 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) GLN207 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN209 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) HIS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (108) GLN109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 1 0 0 (135) SER136 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (137) GLN138 0 0 0 0 0 0 0 0 0 0 0 0 0 39 27 0 0 0 0 0 0 0 (139) PRO140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (140) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 3 0 0 0 0 (198) TYR199 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (200) ASN201 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 (202) ALA203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (203) ALA204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 (204) ALA205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 (206) GLN207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 chainD ( 30) HIS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (108) GLN109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 5 0 0 0 0 0 (137) GLN138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 41 0 (139) PRO140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (140) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 15 0 0 0 (198) TYR199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (200) ASN201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 (202) ALA203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (203) ALA204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 (204) ALA205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 (206) GLN207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 prot.sequence sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQndtadillvkdqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi/sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeeKQndtadillvkdqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQndtadillvkdqfyelldvktrnisksaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkky >1tw8_B:Restriction_endonuclease-like; title=HINCII BOUND TO CA2+ AND COGNATE DNA GTCGAC organism=Haemophilus influenzae DNA sequence DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DC(F7):DG(E8) DG(F8):DC(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(G1):DC(E2) DC(G2):DG(E1) DC(G3):DG(H12) DG(G4):DC(H11) DG(G5):DC(H10) DT(G6):DA(H9) DC(G7):DG(H8) DG(G8):DC(H7) DA(G9):DT(H6) DC(G10):DG(H5) DC(G11):DG(H4) DG(G12):DC(H3) chainB ( 30) HIS31 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLN109 0 0 0 0 0 5 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER136 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) GLN138 0 42 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) PRO140 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) ASN141 0 0 0 16 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) TYR199 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASN201 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ALA203 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ALA204 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ALA205 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) GLN207 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN209 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >1tx3_A:Restriction_endonuclease-like; title=HINCII BOUND TO COGNATE DNA organism=Haemophilus influenzae DNA sequence DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DC(F7):DG(E8) DG(F8):DC(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(G1):DC(E2) DC(G2):DG(E1) DC(G3):DG(H12) DG(G4):DC(H11) DG(G5):DC(H10) DT(G6):DA(H9) DC(G7):DG(H8) DG(G8):DC(H7) DA(G9):DT(H6) DC(G10):DG(H5) DC(G11):DG(H4) DG(G12):DC(H3) chainA (100) GLN109 0 0 1 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ASN110 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ALA137 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) GLN138 0 0 0 0 0 0 0 26 39 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO140 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) ASN141 0 0 0 0 3 7 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) TYR199 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) ASN201 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) ALA203 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) ALA204 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) ALA205 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) GLN207 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) GLN209 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrpaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrnisksAQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil >1tx3_ABCD:Restriction_endonuclease-like; title=HINCII BOUND TO COGNATE DNA organism=Haemophilus influenzae DNA sequence DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DC(F7):DG(E8) DG(F8):DC(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(G1):DC(E2) DC(G2):DG(E1) DC(G3):DG(H12) DG(G4):DC(H11) DG(G5):DC(H10) DT(G6):DA(H9) DC(G7):DG(H8) DG(G8):DC(H7) DA(G9):DT(H6) DC(G10):DG(H5) DC(G11):DG(H4) DG(G12):DC(H3) chainA (100) GLN109 0 0 1 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ASN110 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ALA137 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) GLN138 0 0 0 0 0 0 0 26 39 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO140 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) ASN141 0 0 0 0 3 7 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) TYR199 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) ASN201 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) ALA203 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) ALA204 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) ALA205 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) GLN207 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) GLN209 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 28) HIS31 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) GLN109 0 0 0 0 0 6 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ASN110 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) SER136 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) GLN138 0 40 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) PRO140 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) ASN141 0 0 0 15 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) TYR199 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASN201 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ALA203 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) ALA204 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ALA205 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) GLN207 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) GLN209 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) HIS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (108) GLN109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 3 0 0 (134) SER136 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (136) GLN138 0 0 0 0 0 0 0 0 0 0 0 0 0 39 23 0 0 0 0 0 0 0 (138) PRO140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (139) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 7 1 0 0 0 0 (197) TYR199 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (199) ASN201 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 (201) ALA203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (202) ALA204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 (203) ALA205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 (205) GLN207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (207) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 chainD ( 96) GLN109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 (125) GLN138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 37 0 (127) PRO140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (128) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 14 0 0 0 (186) TYR199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (188) ASN201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 (190) ALA203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (191) ALA204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 (192) ALA205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 (194) GLN207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (196) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 prot.sequence sfikpiyqdinsiligqkvkrpaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrnisksAQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqkvkrpktlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi/sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQndtadillvkqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi/sfikpiyqdinsiligqkvkrepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQndtadillvkdqfyelldvktrnisksaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >1u0c_A:Homing_endonucleases; title=Y33C MUTANT OF HOMING ENDONUCLEASE I-CREI organism=Chlamydomonas reinhardtii DNA sequence DC(D551):DG(C524) DG(D552):DC(C523) DT(D553):DA(C522) DA(D554):DT(C521) DA(D555):DT(C520) DC(D556):DG(C519) DT(D557):DA(C518) DG(D558):DC(C517) DT(D559):DA(C516) DC(D560):DG(C515) DT(D561):DA(C514) DC(D562):DG(C513) DA(D563):DT(C512) DC(D564):DG(C511) DG(D565):DC(C510) DA(D566):DT(C509) DC(D567):DG(C508) DG(D568):DC(C507) DT(D569):DA(C506) DT(D570):DA(C505) DT(D571):DA(C504) DA(D572):DT(C503) DG(D573):DC(C502) DC(D574):DG(C501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) CYS33 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 10 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 13 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 24 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiiaQiKpNqSCkfkhQlsltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >1u0c_AB:Homing_endonucleases; title=Y33C MUTANT OF HOMING ENDONUCLEASE I-CREI organism=Chlamydomonas reinhardtii DNA sequence DC(D551):DG(C524) DG(D552):DC(C523) DT(D553):DA(C522) DA(D554):DT(C521) DA(D555):DT(C520) DC(D556):DG(C519) DT(D557):DA(C518) DG(D558):DC(C517) DT(D559):DA(C516) DC(D560):DG(C515) DT(D561):DA(C514) DC(D562):DG(C513) DA(D563):DT(C512) DC(D564):DG(C511) DG(D565):DC(C510) DA(D566):DT(C509) DC(D567):DG(C508) DG(D568):DC(C507) DT(D569):DA(C506) DT(D570):DA(C505) DT(D571):DA(C504) DA(D572):DT(C503) DG(D573):DC(C502) DC(D574):DG(C501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) CYS33 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 10 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 13 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 24 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 23) ILE324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 25) GLN326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 ( 27) LYS328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 ( 29) ASN330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 31) SER332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 ( 32) CYS333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 ( 37) GLN338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 0 0 ( 43) GLN344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 ( 45) THR346 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 65) TYR366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 67) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 11 0 0 0 0 0 0 ( 69) ARG370 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 13 0 0 0 0 0 0 0 0 ( 72) VAL373 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (138) LYS439 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 (139) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiiaQiKpNqSCkfkhQlsltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiKpNqSCkfkhQlsltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >1u0d_A:Homing_endonucleases; title=Y33H MUTANT OF HOMING ENDONUCLEASE I-CREI organism=Chlamydomonas reinhardtii DNA sequence DC(D551):DG(C524) DG(D552):DC(C523) DG(D553):DC(C522) DA(D554):DT(C521) DA(D555):DT(C520) DC(D556):DG(C519) DT(D557):DA(C518) DG(D558):DC(C517) DT(D559):DA(C516) DC(D560):DG(C515) DT(D561):DA(C514) DC(D562):DG(C513) DA(D563):DT(C512) DC(D564):DG(C511) DG(D565):DC(C510) DA(D566):DT(C509) DC(D567):DG(C508) DT(D569):DC(C507) DT(D570):DA(C505) DT(D571):DA(C504) DC(D572):DG(C503) DG(D573):DC(C502) DC(D574):DG(C501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 2 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) HIS33 0 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 8 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 21 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 9 15 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSHkfkhQlsltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >1u0d_AB:Homing_endonucleases; title=Y33H MUTANT OF HOMING ENDONUCLEASE I-CREI organism=Chlamydomonas reinhardtii DNA sequence DC(D551):DG(C524) DG(D552):DC(C523) DG(D553):DC(C522) DA(D554):DT(C521) DA(D555):DT(C520) DC(D556):DG(C519) DT(D557):DA(C518) DG(D558):DC(C517) DT(D559):DA(C516) DC(D560):DG(C515) DT(D561):DA(C514) DC(D562):DG(C513) DA(D563):DT(C512) DC(D564):DG(C511) DG(D565):DC(C510) DA(D566):DT(C509) DC(D567):DG(C508) DT(D569):DC(C507) DT(D570):DA(C505) DT(D571):DA(C504) DC(D572):DG(C503) DG(D573):DC(C502) DC(D574):DG(C501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 2 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) HIS33 0 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 8 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 21 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 9 15 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ILE324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 ( 25) GLN326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 ( 27) LYS328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 ( 29) ASN330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 31) SER332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 1 ( 32) HIS333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 11 0 ( 37) GLN338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 ( 43) GLN344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 ( 45) THR346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 65) TYR366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 67) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 5 0 0 0 0 0 ( 69) ARG370 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 16 0 0 0 0 0 0 0 ( 72) VAL373 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 (139) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSHkfkhQlsltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgsiIaQiKpNqSHkfkhQlsltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld >1u1o_A:RNA-binding_domain,_RBD; title=CRYSTAL STRUCTURE OF UP1 COMPLEXED WITH D(TTAGGGTTAG(DI)G); A HUMAN TELOMERIC REPEAT CONTAINING INOSINE organism=Homo sapiens DNA sequence DT(B202) DA(B203) DG(B204) DG(B205) DG(B206) DT(B207) DT(B208) DA(B209) DG(B210) DI(B211) DG(B212) chainA ( 4) GLU11 0 0 0 1 0 0 0 0 0 0 0 ( 5) GLN12 0 0 4 0 0 0 0 0 0 0 0 ( 8) LYS15 0 0 10 2 0 0 0 0 0 0 0 ( 10) PHE17 2 38 0 0 0 0 0 0 0 0 0 ( 35) ASP42 0 0 0 11 0 0 0 0 0 0 0 ( 37) VAL44 0 0 0 10 0 0 0 0 0 0 0 ( 39) MET46 0 0 0 6 0 0 0 0 0 0 0 ( 52) PHE59 0 4 30 0 0 0 0 0 0 0 0 ( 75) ARG82 6 0 0 0 0 0 0 0 0 0 0 ( 78) GLU85 14 0 0 0 0 0 0 0 0 0 0 ( 80) LYS87 4 1 0 0 0 0 0 0 0 0 0 ( 82) ALA89 0 1 1 0 0 0 0 0 0 0 0 ( 83) VAL90 0 6 0 0 0 0 0 0 0 0 0 ( 85) ARG92 0 0 28 4 0 26 6 0 0 0 0 ( 88) SER95 0 2 4 0 0 0 0 0 0 0 0 ( 94) HIS101 0 34 0 0 0 0 0 0 0 0 0 prot.sequence kepEQlrKlFigglsfettdeslrshfeqwgtltDcVvMrdpntkrsrgfgFvtyatveevdaamnarphkvdgRvvEpKrAVsRedSqrpgaHltvkkifvggikedteehhlrdyfeqygkievieimtdrgsgkkrgfafvtfddhdsvdkiviqkyhtvnghncevrkalskqemasas >1u1q_A:RNA-binding_domain,_RBD; title=CRYSTAL STRUCTURE OF UP1 COMPLEXED WITH D(TTAGGGTTA(DI)GG); A HUMAN TELOMERIC REPEAT CONTAINING INOSINE organism=Homo sapiens DNA sequence DT(B202) DA(B203) DG(B204) DG(B205) DG(B206) DT(B207) DT(B208) DA(B209) DI(B210) DG(B211) DG(B212) chainA ( 4) GLU11 0 0 0 1 0 0 0 0 0 0 0 ( 5) GLN12 0 0 4 0 0 0 0 0 0 0 0 ( 8) LYS15 0 0 10 2 0 0 0 0 0 0 0 ( 10) PHE17 2 38 0 0 0 0 0 0 0 0 0 ( 35) ASP42 0 0 0 11 0 0 0 0 0 0 0 ( 37) VAL44 0 0 0 10 0 0 0 0 0 0 0 ( 39) MET46 0 0 0 1 0 0 0 0 0 0 0 ( 52) PHE59 0 5 29 0 0 0 0 0 0 0 0 ( 75) ARG82 4 0 0 0 0 0 0 0 0 0 0 ( 78) GLU85 13 0 0 0 0 0 0 0 0 0 0 ( 80) LYS87 3 2 0 0 0 0 0 0 0 0 0 ( 82) ALA89 0 1 1 0 0 0 0 0 0 0 0 ( 83) VAL90 0 7 0 0 0 0 0 0 0 0 0 ( 85) ARG92 0 0 29 4 0 25 4 0 0 0 0 ( 86) GLU93 0 0 0 0 0 0 1 0 0 0 0 ( 88) SER95 0 2 4 0 0 0 0 0 0 0 0 ( 94) HIS101 0 35 0 0 0 0 0 0 0 0 0 prot.sequence kepEQlrKlFigglsfettdeslrshfeqwgtltDcVvMrdpntkrsrgfgFvtyatveevdaamnarphkvdgRvvEpKrAVsREdSqrpgaHltvkkifvggikedteehhlrdyfeqygkievieimtdrgsgkkrgfafvtfddhdsvdkiviqkyhtvnghncevrkalskqemasas >1u35_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE CONTAINING THE HISTONE DOMAIN OF MACROH2A organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DA(J146):DT(I145) DT(J147):DA(I144) DC(J148):DG(I143) DA(J149):DT(I142) DA(J150):DT(I141) DT(J151):DA(I140) DA(J152):DT(I139) DT(J153):DA(I138) DC(J154):DG(I137) DC(J155):DG(I136) DA(J156):DT(I135) DC(J157):DG(I134) DC(J158):DG(I133) DT(J159):DA(I132) DG(J160):DC(I131) DC(J161):DG(I130) DA(J162):DT(I129) DG(J163):DC(I128) DA(J164):DT(I127) DT(J165):DA(I126) DT(J166):DA(I125) DC(J167):DG(I124) DT(J168):DA(I123) DA(J169):DT(I122) DC(J170):DG(I120) DA(J172):DT(I119) DA(J173):DT(I118) DA(J174):DT(I117) DA(J175):DT(I116) DG(J176):DC(I115) DT(J177):DA(I114) DG(J178):DC(I113) DT(J179):DA(I112) DA(J180):DT(I111) DT(J181):DA(I110) DT(J182):DA(I109) DT(J183):DA(I108) DG(J184):DC(I107) DG(J185):DC(I106) DA(J186):DT(I105) DA(J187):DT(I104) DA(J188):DT(I103) DC(J189):DG(I102) DT(J190):DA(I101) DG(J191):DC(I100) DC(J192):DG(I99) DT(J193):DA(I98) DC(J194):DG(I97) DC(J195):DG(I96) DA(J196):DT(I95) DT(J197):DA(I94) DC(J198):DG(I93) DA(J199):DT(I92) DA(J200):DT(I91) DA(J201):DT(I90) DA(J202):DT(I89) DG(J203):DC(I88) DG(J204):DC(I87) DC(J205):DG(I86) DA(J206):DT(I85) DT(J207):DA(I84) DG(J208):DC(I83) DT(J209):DA(I82) DT(J210):DA(I81) DC(J211):DG(I80) DA(J212):DT(I79) DG(J213):DC(I78) DC(J214):DG(I77) DG(J215):DC(I76) DG(J216):DC(I75) DA(J217):DT(I74) DT(J218):DA(I73) DT(J219):DA(I72) DC(J220):DG(I71) DC(J221):DG(I70) DG(J222):DC(I69) DC(J223):DG(I68) DT(J224):DA(I67) DG(J225):DC(I66) DA(J226):DT(I65) DA(J227):DT(I64) DC(J228):DG(I63) DA(J229):DT(I62) DT(J230):DA(I61) DG(J231):DC(I60) DC(J232):DG(I59) DC(J233):DG(I58) DT(J234):DA(I57) DT(J235):DA(I56) DT(J236):DA(I55) DT(J237):DA(I54) DG(J238):DC(I53) DA(J239):DT(I52) DT(J240):DA(I51) DG(J241):DC(I50) DG(J242):DC(I49) DA(J243):DT(I48) DG(J244):DC(I47) DC(J245):DG(I46) DA(J246):DT(I45) DG(J247):DC(I44) DT(J248):DA(I43) DT(J249):DA(I42) DT(J250):DA(I41) DC(J251):DG(I40) DC(J252):DG(I39) DA(J253):DT(I38) DA(J254):DT(I37) DA(J255):DT(I36) DT(J256):DA(I35) DA(J257):DT(I34) DC(J258):DG(I33) DA(J259):DT(I32) DC(J260):DG(I31) DT(J261):DA(I30) DT(J262):DA(I29) DT(J263):DA(I28) DT(J264):DA(I27) DG(J265):DC(I25) DT(J267):DA(I24) DA(J268):DT(I23) DG(J269):DC(I22) DA(J270):DT(I21) DA(J271):DT(I20) DT(J272):DA(I19) DC(J273):DG(I18) DT(J274):DA(I17) DG(J275):DC(I16) DC(J276):DG(I15) DA(J277):DT(I14) DG(J278):DC(I13) DG(J279):DC(I12) DT(J280):DA(I11) DG(J281):DC(I10) DG(J282):DC(I9) DA(J283):DT(I8) DT(J284):DA(I7) DA(J285):DT(I6) DT(J286):DA(I5) DT(J287):DA(I4) DG(J288):DC(I3) DA(J289):DT(I2) DT(J290):DA(I1) chainA ( 2) HIS439 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) LYS814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) HIS639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) LYS1014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG1042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ILE1436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/KtsrsakagvifpvgrmlryikkghpkyRigvgapvymaavleyltaeilelavnaardnkkgrvtprhillavandeelnqllkgvtiasggvlpnihpellakk/RkesysiyvykvlkqvhpdtgisskamgImnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytssk/pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/kVLRdniqgitkpairrlarrggvkriSgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/KtsrsakagvifpvgrmlryikkghpkyRigvgapvymaavleyltaeilelavnaardnkkgrvtprhillavandeelnqllkgvtiasggvlpnihpellakk/krgRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytssk >1u35_G:Histone-fold; title=CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE CONTAINING THE HISTONE DOMAIN OF MACROH2A organism=? DNA sequence DA(I1):DT(J290) DT(I2):DA(J289) DC(I3):DG(J288) DA(I4):DT(J287) DA(I5):DT(J286) DT(I6):DA(J285) DA(I7):DT(J284) DT(I8):DA(J283) DC(I9):DG(J282) DC(I10):DG(J281) DA(I11):DT(J280) DC(I12):DG(J279) DC(I13):DG(J278) DT(I14):DA(J277) DG(I15):DC(J276) DC(I16):DG(J275) DA(I17):DT(J274) DG(I18):DC(J273) DA(I19):DT(J272) DT(I20):DA(J271) DT(I21):DA(J270) DC(I22):DG(J269) DT(I23):DA(J268) DA(I24):DT(J267) DC(I25):DG(J265) DA(I27):DT(J264) DA(I28):DT(J263) DA(I29):DT(J262) DA(I30):DT(J261) DG(I31):DC(J260) DT(I32):DA(J259) DG(I33):DC(J258) DT(I34):DA(J257) DA(I35):DT(J256) DT(I36):DA(J255) DT(I37):DA(J254) DT(I38):DA(J253) DG(I39):DC(J252) DG(I40):DC(J251) DA(I41):DT(J250) DA(I42):DT(J249) DA(I43):DT(J248) DC(I44):DG(J247) DT(I45):DA(J246) DG(I46):DC(J245) DC(I47):DG(J244) DT(I48):DA(J243) DC(I49):DG(J242) DC(I50):DG(J241) DA(I51):DT(J240) DT(I52):DA(J239) DC(I53):DG(J238) DA(I54):DT(J237) DA(I55):DT(J236) DA(I56):DT(J235) DA(I57):DT(J234) DG(I58):DC(J233) DG(I59):DC(J232) DC(I60):DG(J231) DA(I61):DT(J230) DT(I62):DA(J229) DG(I63):DC(J228) DT(I64):DA(J227) DT(I65):DA(J226) DC(I66):DG(J225) DA(I67):DT(J224) DG(I68):DC(J223) DC(I69):DG(J222) DG(I70):DC(J221) DG(I71):DC(J220) DA(I72):DT(J219) DA(I73):DT(J218) DT(I74):DA(J217) DC(I75):DG(J216) DC(I76):DG(J215) DG(I77):DC(J214) DC(I78):DG(J213) DT(I79):DA(J212) DG(I80):DC(J211) DA(I81):DT(J210) DA(I82):DT(J209) DC(I83):DG(J208) DA(I84):DT(J207) DT(I85):DA(J206) DG(I86):DC(J205) DC(I87):DG(J204) DC(I88):DG(J203) DT(I89):DA(J202) DT(I90):DA(J201) DT(I91):DA(J200) DT(I92):DA(J199) DG(I93):DC(J198) DA(I94):DT(J197) DT(I95):DA(J196) DG(I96):DC(J195) DG(I97):DC(J194) DA(I98):DT(J193) DG(I99):DC(J192) DC(I100):DG(J191) DA(I101):DT(J190) DG(I102):DC(J189) DT(I103):DA(J188) DT(I104):DA(J187) DT(I105):DA(J186) DC(I106):DG(J185) DC(I107):DG(J184) DA(I108):DT(J183) DA(I109):DT(J182) DA(I110):DT(J181) DT(I111):DA(J180) DA(I112):DT(J179) DC(I113):DG(J178) DA(I114):DT(J177) DC(I115):DG(J176) DT(I116):DA(J175) DT(I117):DA(J174) DT(I118):DA(J173) DT(I119):DA(J172) DG(I120):DC(J170) DT(I122):DA(J169) DA(I123):DT(J168) DG(I124):DC(J167) DA(I125):DT(J166) DA(I126):DT(J165) DT(I127):DA(J164) DC(I128):DG(J163) DT(I129):DA(J162) DG(I130):DC(J161) DC(I131):DG(J160) DA(I132):DT(J159) DG(I133):DC(J158) DG(I134):DC(J157) DT(I135):DA(J156) DG(I136):DC(J155) DG(I137):DC(J154) DA(I138):DT(J153) DT(I139):DA(J152) DA(I140):DT(J151) DT(I141):DA(J150) DT(I142):DA(J149) DG(I143):DC(J148) DA(I144):DT(J147) DT(I145):DA(J146) chainG ( 1) LYS1014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG1042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KtsrsakagvifpvgrmlryikkghpkyRigvgapvymaavleyltaeilelavnaardnkkgrvtprhillavandeelnqllkgvtiasggvlpnihpellakk >1u3e_M:His-Me_finger_endonucleases;DNA-binding_domain_of_intron-encoded_endonucleases; title=DNA BINDING AND CLEAVAGE BY THE HNH HOMING ENDONUCLEASE I-HMUI organism=Bacillus phage SPO1 DNA sequence DC(B2):DG(A36) DT(B3):DA(A35) DT(B4):DA(A34) DA(B5):DT(A33) DC(B6):DG(A32) DG(B7):DC(A31) DT(B8):DA(A30) DG(B9):DC(A29) DG(B10):DC(A28) DG(B11):DC(A27) DA(B12):DT(A26) DA(B13):DT(A25) DT(B14):DA(A24) DT(B15):DA(A23) DG(B16):DC(A22) DC(B17):DG(A21) DT(B18):DA(A20) DG(B19):DC(A19) DA(B20):DT(A18) DG(B21):DC(A17) DC(B22):DG(A16) DG(C23):DC(A15) DT(C24):DA(A14) DT(C25):DA(A13) DA(C26):DT(A12) DG(C27):DC(A11) DG(C28):DC(A10) DC(C29):DG(A9) DT(C30):DA(A8) DC(C31):DG(A7) DA(C32):DT(A6) DT(C33):DA(A5) DT(C34):DA(A4) chainM ( 33) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 0 0 0 0 0 0 ( 35) PRO35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 37) ASP37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 39) TYR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 4 0 0 0 0 0 0 0 0 0 0 ( 41) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 1 0 0 0 0 0 0 0 0 ( 45) PHE45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 ( 52) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 ( 54) GLN54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 ( 93) GLN93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) VAL97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) GLN100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) LEU106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) VAL108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) ALA111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) GLN112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ALA115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ASN119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) THR148 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ARG149 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) LYS151 0 0 0 0 0 0 0 12 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) THR153 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ASP154 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) ARG160 0 0 0 0 0 0 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mewkdikgyeghyqvsntgevysiksgktlkhQiPkDgYhRiglFkggkgkTfQvhrlvaihfcegyeeglvvdhkdgnkdnnlstnlrwvtQkinVenQmsrgtLnVskAQqiAkikNqkpiivispdgiekeypstkcaceelglTRgKvTDvlkghRihhkgytfryklng >1u45_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=8OXOGUANINE AT THE PRE-INSERTION SITE OF THE POLYMERASE ACTIVE SITE organism=Geobacillus stearothermophilus DNA sequence DC(B21):DG(C12) DC(B22):DG(C11) DT(B23):DA(C10) DG(B24):DC(C9) DA(B25):DT(C8) DC(B26):DG(C7) DT(B27):DA(C6) DC(B28):DG(C5) DG(B29):DC(C4) chainA (286) LYS582 0 0 0 0 3 5 0 0 0 (319) ARG615 0 0 0 0 0 0 0 3 11 (329) ASN625 0 0 0 0 0 3 4 1 0 (333) ARG629 0 0 0 0 0 0 0 8 4 (418) TYR714 0 0 0 0 0 0 0 0 46 (497) ASN793 0 0 0 0 0 0 0 0 1 (501) GLN797 0 0 0 0 0 0 0 1 5 (533) HIS829 0 0 0 0 0 0 0 2 0 prot.sequence aamaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1u47_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CYTOSINE-8-OXOGUANINE BASE PAIR AT THE POLYMERASE ACTIVE SITE organism=Geobacillus stearothermophilus DNA sequence DC(C5):DG(B28) DG(C6):DC(B27) DA(C7):DT(B26) DG(C8):DC(B25) DT(C9):DA(B24) DC(C10):DG(B23) DA(C11):DT(B22) DG(C12):DC(B21) DG(C13):DC(B20) chainA (286) LYS582 0 0 4 3 0 0 0 0 0 (291) TYR587 0 1 0 0 0 0 0 0 0 (319) ARG615 1 0 0 0 0 0 0 0 0 (326) ASN622 0 1 0 0 0 0 0 0 0 (329) ASN625 1 7 1 0 0 0 0 0 0 prot.sequence aamaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1u48_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=EXTENSION OF A CYTOSINE-8-OXOGUANINE BASE PAIR organism=Geobacillus stearothermophilus DNA sequence DC(B20):DG(C13) DT(B21):DA(C12) DG(B22):DC(C11) DA(B23):DT(C10) DC(B24):DG(C9) DT(B25):DA(C8) DC(B26):DG(C7) DG(B27):DC(C6) DC(B28):8OG(C5) DA(B29):DT(C4) chainA (286) LYS582 0 0 0 0 0 3 5 0 0 0 (291) TYR587 0 0 0 0 0 0 0 1 0 0 (319) ARG615 0 0 0 0 0 0 0 0 1 8 (326) ASN622 0 0 0 0 0 0 0 1 0 0 (329) ASN625 0 0 0 0 0 0 2 9 1 0 (333) ARG629 0 0 0 0 0 0 0 0 8 4 (418) TYR714 0 0 0 0 0 0 0 0 0 44 (501) GLN797 0 0 0 0 0 0 0 0 0 3 prot.sequence aamaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1u49_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=ADENINE-8OXOGUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE organism=Geobacillus stearothermophilus DNA sequence DC(C5):DG(B28) DG(C6):DC(B27) DA(C7):DT(B26) DG(C8):DC(B25) DT(C9):DA(B24) DC(C10):DG(B23) DA(C11):DT(B22) DG(C12):DC(B21) DG(C13):DC(B20) chainA (286) LYS582 0 0 5 3 0 0 0 0 0 (291) TYR587 0 1 0 0 0 0 0 0 0 (319) ARG615 3 0 0 0 0 0 0 0 0 (326) ASN622 0 1 0 0 0 0 0 0 0 (329) ASN625 1 7 2 0 0 0 0 0 0 (333) ARG629 5 0 0 0 0 0 0 0 0 (533) HIS829 1 0 0 0 0 0 0 0 0 prot.sequence aamaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1u4b_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=EXTENSION OF AN ADENINE-8OXOGUANINE MISMATCH organism=Geobacillus stearothermophilus DNA sequence DT(B20):DA(C13) DG(B21):DC(C12) DA(B22):DT(C11) DC(B23):DG(C10) DT(B24):DA(C9) DC(B25):DG(C8) DG(B26):DC(C7) DA(B27):8OG(C6) DT(B28):DA(C5) DA(B29):DT(C4) chainA (286) LYS582 0 0 0 0 0 2 6 0 0 0 (319) ARG615 0 0 0 0 0 0 0 0 1 7 (329) ASN625 0 0 0 0 0 0 2 6 1 0 (418) TYR714 0 0 0 0 0 0 0 0 0 48 (501) GLN797 0 0 0 0 0 0 0 0 0 2 prot.sequence aamaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepnlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1u78_A:Homeodomain-like; title=STRUCTURE OF THE BIPARTITE DNA-BINDING DOMAIN OF TC3 TRANSPOSASE BOUND TO TRANSPOSON DNA organism=Caenorhabditis elegans DNA sequence DT(C29):DA(B27) DG(C30):DC(B26) DT(C31):DA(B25) DG(C32):DC(B24) DG(C33):DC(B23) DG(C34):DC(B22) DA(C35):DT(B21) DA(C36):DT(B20) DA(C37):DT(B19) DG(C38):DC(B18) DT(C39):DA(B17) DT(C40):DA(B16) DC(C41):DG(B15) DT(C42):DA(B14) DA(C43):DT(B13) DT(C44):DA(B12) DA(C45):DT(B11) DG(C46):DC(B10) DG(C47):DC(B9) DA(C48):DT(B8) DC(C49):DG(B7) DC(C50):DG(B6) DC(C51):DG(B5) DC(C52):DG(B4) DC(C53):DG(B3) chainA ( 1) PRO2 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 5 3 0 0 0 0 0 0 0 0 ( 2) ARG3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 18 10 0 0 0 0 0 0 0 ( 25) HIS26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 ( 34) SER35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 ( 35) ARG36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 6 0 0 0 ( 36) HIS37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 17 17 0 0 0 0 0 0 ( 39) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 ( 53) ARG54 0 0 0 0 0 0 0 0 0 0 0 0 1 10 12 0 0 0 0 0 0 0 0 0 0 ( 56) ARG57 0 0 0 0 0 0 0 0 0 5 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) SER92 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) LYS93 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG94 0 0 0 0 14 15 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) THR95 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) LEU97 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN98 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence PRgsalsdteraqldvmkllnvslHemsrkisrSRHciRvylkdpvsygtskRapRrkalsvrdernviraasnscktardirnelqlsaSKRTiLNvikrsg >1u8b_A:Ada_DNA_repair_protein,_N-terminal_domain_N-Ada_10; title=CRYSTAL STRUCTURE OF THE METHYLATED N-ADA/DNA COMPLEX organism=Escherichia coli DNA sequence DA(D401):DT(E512) DA(D402):DT(E511) DA(D403):DT(E510) DG(D404):DC(E509) DC(D405):DG(E508) DG(D406):DC(E507) DC(D407):DG(E506) DA(D408):DT(E505) DA(D409):DT(E504) DG(D410):DC(E503) DA(D411):DT(E502) DT(D412):DA(E501) DA(B201):DT(C305) DA(B202):DT(C304) DA(B203):DT(C303) DT(B204):DA(C302) DT(B205):DA(C301) chainA ( 27) THR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 28) THR34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 ( 38) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 6 0 ( 64) ARG71 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 (107) PHE114 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 prot.sequence mkddqrwqsvlardpnadgefvfavrTTgifrpscraRhalrenvsfyanasealaagfrpckRcqpdkanprqhrldkithacrlleqetpvtlealadqvamspFhlhrlfkattgmtpkawqqawrar >1u8r_ABCD:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain;C-terminal_domain_of_transcriptional_repressors; title=CRYSTAL STRUCTURE OF AN IDER-DNA COMPLEX REVEALS A CONFORMATIONAL CHANGE IN ACTIVATED IDER FOR BASE-SPECIFIC INTERACTIONS organism=Mycobacterium tuberculosis DNA sequence DC(E1):DG(F32) DC(E2):DG(F31) DC(E3):DG(F30) DT(E4):DA(F29) DG(E5):DC(F28) DT(E6):DA(F27) DT(E7):DA(F26) DA(E8):DT(F25) DG(E9):DC(F24) DC(E10):DG(F23) DA(E11):DT(F22) DC(E12):DG(F21) DA(E13):DT(F20) DG(E14):DC(F19) DG(E15):DC(F18) DC(E16):DG(F17) DT(E17):DA(F16) DG(E18):DC(F15) DC(E19):DG(F14) DC(E20):DG(F13) DC(E21):DG(F12) DT(E22):DA(F11) DA(E23):DT(F10) DA(E24):DT(F9) DT(E25):DA(F8) DT(E26):DA(F7) DT(E27):DA(F6) DT(E28):DA(F5) DA(E29):DT(F4) DG(E30):DC(F3) DT(E31):DA(F2) DG(E32):DC(F1) chainA ( 37) SER37 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 37) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 5 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 43) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 37) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 37) SER37 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 2 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN43 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnelvdttemylrtiydleeegvtplrariaerldqSgPTvsQtvsRmerdgllrvagdrhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipgldelgvglvrltelpagspvavvvrqltehvqgdidlitrlkdagvvpnarvtvettpgggvtivipghenvtlphemahavkvekv/mnelvdttemylrtiydleeegvtplrariaerldqSgPTvSQtvsRmerdgllrvagdrhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipgldelgvglvrltelpagspvavvvrqltehvqgdidlitrlkdagvvpnarvtvettpgggvtivipghenvtlphemahavkvekv/mnelvdttemylrtiydleeegvtplrariaerldqSgPTvsQtvsRmerdgllrvagdrhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipgldelgvglvrltelpagspvavvvrqltehvqgdidlitrlkdagvvpnarvtvettpgggvtivipghenvtlphemahavkvekv/mnelvdttemylrtiydleeegvtplrariaerldqSgPTvsQtvsRmerdgllrvagdrhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipgldelgvglvrltelpagspvavvvrqltehvqgdidlitrlkdagvvpnarvtvettpgggvtivipghenvtlphemahavkvekv >1u8r_B:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain;C-terminal_domain_of_transcriptional_repressors; title=CRYSTAL STRUCTURE OF AN IDER-DNA COMPLEX REVEALS A CONFORMATIONAL CHANGE IN ACTIVATED IDER FOR BASE-SPECIFIC INTERACTIONS organism=Mycobacterium tuberculosis DNA sequence DC(E1):DG(F32) DC(E2):DG(F31) DC(E3):DG(F30) DT(E4):DA(F29) DG(E5):DC(F28) DT(E6):DA(F27) DT(E7):DA(F26) DA(E8):DT(F25) DG(E9):DC(F24) DC(E10):DG(F23) DA(E11):DT(F22) DC(E12):DG(F21) DA(E13):DT(F20) DG(E14):DC(F19) DG(E15):DC(F18) DC(E16):DG(F17) DT(E17):DA(F16) DG(E18):DC(F15) DC(E19):DG(F14) DC(E20):DG(F13) DC(E21):DG(F12) DT(E22):DA(F11) DA(E23):DT(F10) DA(E24):DT(F9) DT(E25):DA(F8) DT(E26):DA(F7) DT(E27):DA(F6) DT(E28):DA(F5) DA(E29):DT(F4) DG(E30):DC(F3) DT(E31):DA(F2) DG(E32):DC(F1) chainB ( 37) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 5 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 43) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnelvdttemylrtiydleeegvtplrariaerldqSgPTvSQtvsRmerdgllrvagdrhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipgldelgvglvrltelpagspvavvvrqltehvqgdidlitrlkdagvvpnarvtvettpgggvtivipghenvtlphemahavkvekv >1u8r_GHIJ:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain;C-terminal_domain_of_transcriptional_repressors; title=CRYSTAL STRUCTURE OF AN IDER-DNA COMPLEX REVEALS A CONFORMATIONAL CHANGE IN ACTIVATED IDER FOR BASE-SPECIFIC INTERACTIONS organism=Mycobacterium tuberculosis DNA sequence DC(K1):DG(L32) DC(K2):DG(L31) DC(K3):DG(L30) DT(K4):DA(L29) DG(K5):DC(L28) DT(K6):DA(L27) DT(K7):DA(L26) DA(K8):DT(L25) DG(K9):DC(L24) DC(K10):DG(L23) DA(K11):DT(L22) DC(K12):DG(L21) DA(K13):DT(L20) DG(K14):DC(L19) DG(K15):DC(L18) DC(K16):DG(L17) DT(K17):DA(L16) DG(K18):DC(L15) DC(K19):DG(L14) DC(K20):DG(L13) DC(K21):DG(L12) DT(K22):DA(L11) DA(K23):DT(L10) DA(K24):DT(L9) DT(K25):DA(L8) DT(K26):DA(L7) DT(K27):DA(L6) DT(K28):DA(L5) DA(K29):DT(L4) DG(K30):DC(L3) DT(K31):DA(L2) DG(K32):DC(L1) chainG ( 37) SER37 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 37) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 2 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 43) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI ( 37) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 37) SER37 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 5 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER42 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN43 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnelvdttemylrtiydleeegvtplrariaerldqSgPTvsQtvsRmerdgllrvagdrhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipgldelgvglvrltelpagspvavvvrqltehvqgdidlitrlkdagvvpnarvtvettpgggvtivipghenvtlphemahavkvekv/mnelvdttemylrtiydleeegvtplrariaerldqSgPTvSQtvsRmerdgllrvagdrhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipgldelgvgnlvrltelpagspvavvvrqltehvqgdidlitrlkdagvvpnarvtvettpgggvtivipghenvtlphemahavkvekv/mnelvdttemylrtiydleeegvtplrariaerldqSgPTvsQtvsRmerdgllrvagdrhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipgldelgvglvrltelpagspvavvvrqltehvqgdidlitrlkdagvvpnarvtvettpgggvtivipghenvtlphemahavkvekv/mnelvdttemylrtiydleeegvtplrariaerldqSgPTvSQtvsRmerdgllrvagdrhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipgldelgvgnlvrltelpagspvavvvrqltehvqgdidlitrlkdagvvpnarvtvettpgggvtivipghenvtlphemahavkvekv >1ua0_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=AMINOFLUORENE DNA ADDUCT AT THE PRE-INSERTION SITE OF A DNA POLYMERASE organism=Geobacillus stearothermophilus DNA sequence DC(C4):DG(B29) DA(C5):DT(B28) DC(C6):DG(B27) DC(C7):DG(B26) DA(C8):DT(B25) DT(C9):DA(B24) DC(C10):DG(B23) DC(C11):DG(B22) DC(C12):DG(B21) chainA (286) LYS582 0 0 0 6 3 0 0 0 0 (291) TYR587 0 0 1 0 0 0 0 0 0 (319) ARG615 11 2 0 0 0 0 0 0 0 (326) ASN622 0 0 1 0 0 0 0 0 0 (329) ASN625 0 1 9 2 0 0 0 0 0 (333) ARG629 2 8 0 0 0 0 0 0 0 (418) TYR714 45 0 0 0 0 0 0 0 0 (501) GLN797 4 1 0 0 0 0 0 0 0 prot.sequence aamaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1ua1_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF AMINOFLUORENE ADDUCT PAIRED OPPOSITE CYTOSINE AT THE POLYMERASE ACTIVE SITE. organism=Geobacillus stearothermophilus DNA sequence DA(B6):DT(C37) DG(B7):DC(C36) DG(B8):DC(C35) DG(B9):DC(C34) DA(B10):DT(C33) DT(B11):DA(C32) DG(B12):DC(C31) DG(B13):DC(C30) DT(B14):DA(C29) DG(B15):DC(C28) DC(B16):DG(C27) chainA (286) LYS582 0 0 0 0 0 0 1 6 0 0 0 (291) TYR587 0 0 0 0 0 0 0 0 1 0 0 (319) ARG615 0 0 0 0 0 0 0 0 0 3 7 (329) ASN625 0 0 0 0 0 0 0 2 4 1 0 (414) PHE710 0 0 0 0 0 0 0 0 0 0 2 (418) TYR714 0 0 0 0 0 0 0 0 0 0 51 (420) ILE716 0 0 0 0 0 0 0 0 0 0 4 (533) HIS829 0 0 0 0 0 0 0 0 0 1 0 prot.sequence aamaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiqgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1uaa_AB:P-loop_containing_nucleoside_triphosphate_hydrolases; title=E. COLI REP HELICASE/DNA COMPLEX organism=? DNA sequence DT(C15) DT(C1) DT(C2) DT(C3) DT(C4) DT(C5) DT(C6) DT(C7) DT(C8) DT(C9) DT(C10) DT(C11) DT(C12) DT(C13) DT(C14):DT(C15) chainA (128) LYS129 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (132) GLN133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (133) GLN134 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (136) SER137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (249) TRP250 0 0 0 0 0 0 0 0 0 0 0 0 0 46 9 (250) ARG251 8 0 0 0 0 0 0 0 0 0 0 0 0 0 14 (349) ARG350 0 0 0 0 0 0 0 0 0 0 0 0 8 15 0 (355) ARG356 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (554) HIS558 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 (576) HIS580 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 (578) SER582 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 (612) ARG616 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB ( 84) HIS85 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 ( 89) ASP90 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 92) LYS93 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 ( 93) ARG94 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (102) ALA103 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (104) PHE105 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (106) LEU107 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 (109) ASP110 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (132) GLN133 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 (182) PHE183 0 0 0 0 0 31 2 0 0 0 0 0 0 0 0 (249) TRP250 0 0 60 10 0 0 0 0 0 0 0 0 0 0 0 (250) ARG251 0 0 0 7 12 1 0 0 0 0 0 0 0 0 0 (349) ARG350 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 (549) HIS558 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 (571) HIS580 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 (573) SER582 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (574) SER583 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rlnpgqqqavefvtgpclvlagagsgktrvitnkiahlirgcgyqarhiaavtftnkaaremkervgqtlgrkearglmistfHtlgldiikreyaalgmkanfslfdDtdqlallkelteglieddKvllQQliStisnwkndlktpsqaaasaigerdrifahcyglydahlkacnvldFddlillptlllqaneevrkrwqnkiryllvdeyqdtntsqyelvkllvgsrarftvvgdddqsiysWRgarpqnlvllsqdfpalkvikleqnyrssgrilkaaniliannphvfekrlfselgygaelkvlsanneeheaervtgeliahhfvnktqykdyailyRgnhqsRvfekflmqnripykisggtsffsrpeikdllaylrvltnpdddsaflrivntpkreigpatlkklgewamtrnksmftasfdmglsqtlsgrgyealtrfthwlaeiqrlaerepiaavrdlihgmdyeswlyetspspkaaemrmknvnqlfswmtemlegseldepmtltqvvtrftlRdmmereeeldqvqlmtlHaskglefpyvymvgmeegflpHqSsidednideerrlayvgitraqkeltftlckerRqygelvrpepsrfllelpqddliw/rlnpgqqqavefvtgpclvlagagsgktrvitnkiahlirgcgyqarhiaavtftnkaaremkervgqtlgrkearglmistfHtlglDiiKReyaalgmkAnFsLfdDtdqlallkelteglieddkvllQqlistisnwkndlktpsqaaasaigerdrifahcyglydahlkacnvldFddlillptlllqaneevrkrwqnkiryllvdeyqdtntsqyelvkllvgsrarftvvgdddqsiysWRgarpqnlvllsqdfpalkvikleqnyrssgrilkaaniliannphvfekrlfselgygaelkvlsanneeheaervtgeliahhfvnktqykdyailyRgnhqsrvfekflmqnripykisggtsffsrpeikdllaylrvltnpdddsaflrivntpkreigpatlkklgewamtrnksmftasfdmglsqtlsgrgyealtrfthwlaeiqrlaerepiaavrdlihgmdyeswlyetspspkaaemrmknvnqlfswmtemlegseldepmtltqvvtrftlrdeeldqvqlmtlHaskglefpyvymvgmeegflpHqSSidednideerrlayvgitraqkeltftlckerrqygelvrpepsrfllelpqddliweq >1uaa_B:P-loop_containing_nucleoside_triphosphate_hydrolases;?; title=E. COLI REP HELICASE/DNA COMPLEX organism=? DNA sequence DT(C15) DT(C1) DT(C2) DT(C3) DT(C4) DT(C5) DT(C6) DT(C7) DT(C8) DT(C9) DT(C10) DT(C11) DT(C12) DT(C13) DT(C14):DT(C15) chainB ( 84) HIS85 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 ( 89) ASP90 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 92) LYS93 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 ( 93) ARG94 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (102) ALA103 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (104) PHE105 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (106) LEU107 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 (109) ASP110 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (132) GLN133 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 (182) PHE183 0 0 0 0 0 31 2 0 0 0 0 0 0 0 0 (249) TRP250 0 0 60 10 0 0 0 0 0 0 0 0 0 0 0 (250) ARG251 0 0 0 7 12 1 0 0 0 0 0 0 0 0 0 (349) ARG350 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 (549) HIS558 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 (571) HIS580 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 (573) SER582 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (574) SER583 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rlnpgqqqavefvtgpclvlagagsgktrvitnkiahlirgcgyqarhiaavtftnkaaremkervgqtlgrkearglmistfHtlglDiiKReyaalgmkAnFsLfdDtdqlallkelteglieddkvllQqlistisnwkndlktpsqaaasaigerdrifahcyglydahlkacnvldFddlillptlllqaneevrkrwqnkiryllvdeyqdtntsqyelvkllvgsrarftvvgdddqsiysWRgarpqnlvllsqdfpalkvikleqnyrssgrilkaaniliannphvfekrlfselgygaelkvlsanneeheaervtgeliahhfvnktqykdyailyRgnhqsrvfekflmqnripykisggtsffsrpeikdllaylrvltnpdddsaflrivntpkreigpatlkklgewamtrnksmftasfdmglsqtlsgrgyealtrfthwlaeiqrlaerepiaavrdlihgmdyeswlyetspspkaaemrmknvnqlfswmtemlegseldepmtltqvvtrftlrdeeldqvqlmtlHaskglefpyvymvgmeegflpHqSSidednideerrlayvgitraqkeltftlckerrqygelvrpepsrfllelpqddliweq >1ubd_C:C2H2_and_C2HC_zinc_fingers; title=CO-CRYSTAL STRUCTURE OF HUMAN YY1 ZINC FINGER DOMAIN BOUND TO THE ADENO-ASSOCIATED VIRUS P5 INITIATOR ELEMENT organism=Homo sapiens DNA sequence DC(B21):DG(A20) DG(B22):DC(A19) DC(B23):DG(A18) DT(B24):DA(A17) DT(B25):DA(A16) DC(B26):DG(A15) DA(B27):DT(A14) DA(B28):DT(A13) DA(B29):DT(A12) DA(B30):DT(A11) DT(B31):DA(A10) DG(B32):DC(A9) DG(B33):DC(A8) DA(B34):DT(A7) DG(B35):DC(A6) DA(B36):DT(A5) DC(B37):DG(A4) DC(B38):DG(A3) DC(B39):DG(A2) DT(B40):DA(A1) chainC ( 21) LYS315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 42) GLU336 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 7 0 0 0 0 ( 44) SER338 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 ( 45) LYS339 0 0 0 0 0 0 0 0 0 0 0 6 8 2 0 0 0 0 0 0 ( 48) ARG342 0 0 0 0 0 0 0 0 0 0 13 12 2 0 0 0 0 0 0 0 ( 72) LEU366 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 74) PHE368 0 0 0 0 0 0 0 0 0 1 8 17 5 0 0 0 0 0 0 0 ( 75) ASN369 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 (102) GLN396 0 0 0 0 0 0 10 12 2 0 0 0 0 0 0 0 0 0 0 0 (104) THR398 0 0 0 0 0 0 2 7 6 0 0 0 0 0 0 0 0 0 0 0 (105) ASN399 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tiacphkgctkmfrdnsamrKhlhthgprvhvcaecgkafvEsSKlkRhqlvhtgekpfqctfegcgkrfsLdFNlrthvrihtgdrpyvcpfdgcnkkfaQsTNlkshiltha >1v14_A:His-Me_finger_endonucleases; title=CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH MG+2 AND DSDNA (RESOLUTION 2.9A) organism=ESCHERICHIA COLI DNA sequence DG(E3):DC(F14) DA(E4):DT(F13) DT(E5):DA(F12) DC(E6):DG(F11) DG(E7):DC(F10) DC(E8):DG(F9) chainA ( 4) ARG5 0 0 0 2 0 0 ( 50) ASP51 0 0 0 0 0 5 ( 53) ARG54 0 0 0 0 2 2 ( 95) ARG96 0 3 7 3 0 0 prot.sequence eskRnkpgkatgkgkpvgdkwlddagkdsgapipdriadklrdkefksfDdfRkavweevskdpelsknlnpsnkssvskgyspftpknqqvggRkvyelhadkpisqggevydmdnirvttpkrhidihrg >1v15_A:His-Me_finger_endonucleases; title=CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) organism=? DNA sequence DG(F9):DC(E8) DC(F10):DG(E7) DG(F11):DC(E6) DA(F12):DT(E5) DT(F13):DA(E4) DC(F14):DG(E3) chainA ( 3) ARG5 0 0 3 0 0 0 ( 36) ASP51 5 0 0 0 0 0 ( 39) ARG54 4 2 0 0 0 0 ( 71) ARG96 0 0 0 2 5 0 prot.sequence skRnkpgkatgkgkpvgdkwlddagkdsgapiksfDdfRkavweevskdpkssvskgyspftpknqqvggRkvyelhadkpisqggevydmdnirvttpkrhidih >1vas_A:T4_endonuclease_V; title=ATOMIC MODEL OF A PYRIMIDINE DIMER SPECIFIC EXCISION REPAIR ENZYME COMPLEXED WITH A DNA SUBSTRATE: STRUCTURAL BASIS FOR DAMAGED DNA RECOGNITION organism=Enterobacteria phage T4 DNA sequence DT(B202):DA(C226) DC(B203):DG(C225) DG(B204):DC(C224) DC(B205):DG(C223) DG(B206):DC(C222) DT(B207):DA(C221) DT(B208):DA(C220) DG(B209):DC(C219) DC(B210):DG(C218) DG(B211):DC(C217) DC(B212):DG(C216) DT(B213):DA(C215) chainA ( 1) THR2 0 0 0 0 0 1 3 0 0 0 0 0 ( 17) MET18 0 0 0 0 4 0 0 0 0 0 0 0 ( 20) TYR21 0 0 0 0 0 18 0 0 0 0 0 0 ( 21) ARG22 0 0 0 0 58 1 0 0 0 0 0 0 ( 22) GLN23 0 0 0 0 0 9 0 0 0 0 0 0 ( 24) PRO25 0 0 0 0 0 16 0 0 0 0 0 0 ( 25) ARG26 0 0 0 0 0 8 30 0 0 0 0 0 ( 70) GLN71 0 0 0 0 0 14 0 0 0 0 0 0 ( 74) ILE75 0 0 0 0 0 3 0 0 0 0 0 0 ( 86) ASP87 0 0 0 0 0 16 0 0 0 0 0 0 ( 90) GLN91 0 0 0 0 0 15 0 0 0 0 0 0 (127) TRP128 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence TrinltlvseladqhlMaeYRQlPRvfgavrkhvangkrvrdfkisptfilgaghvtffydkleflrkrQielIaeclkrgfnikDttvQdisdipqefrgdyipheasiaisqarldekiaqrptWykyygkaiya >1vfc_A:Homeodomain-like; title=SOLUTION STRUCTURE OF THE DNA COMPLEX OF HUMAN TRF2 organism=HOMO SAPIENS DNA sequence DC(C14):DG(B13) DC(C15):DG(B12) DC(C16):DG(B11) DT(C17):DA(B10) DA(C18):DT(B9) DA(C19):DT(B8) DC(C20):DG(B7) DC(C21):DG(B6) DC(C22):DG(B5) DT(C23):DA(B4) DA(C24):DT(B3) DA(C25):DT(B2) DC(C26):DG(B1) chainA ( 10) LYS447 0 0 0 4 8 2 0 0 0 0 0 0 0 ( 47) ALA484 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 48) VAL485 0 0 0 0 0 0 0 0 3 2 2 0 0 ( 51) LYS488 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 52) ASP489 0 0 0 0 0 0 5 7 1 0 0 0 0 ( 55) ARG492 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence edsttnitkKqkwtveesewvkagvqkygegnwaaisknypfvnrtAVmiKDrwRtmkrlgmn >1vkx_A:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF THE NFKB P50/P65 HETERODIMER COMPLEXED TO THE IMMUNOGLOBULIN KB DNA organism=MUS MUSCULUS DNA sequence DG(D14):DC(C12) DG(D15):DC(C11) DA(D16):DT(C10) DA(D17):DT(C9) DA(D18):DT(C8) DG(D19):DC(C7) DT(D20):DA(C6) DC(D21):DG(C5) DC(D22):DG(C4) DC(D23):DG(C3) DC(D24):DG(C2) chainA ( 15) ARG33 19 11 0 0 0 0 0 0 0 0 0 ( 17) ARG35 15 2 0 0 0 0 0 0 0 0 0 ( 18) TYR36 0 0 6 9 0 0 0 0 0 0 0 ( 20) CYS38 0 0 1 0 0 0 0 0 0 0 0 ( 21) GLU39 2 3 4 0 0 0 0 0 0 0 0 (169) ARG187 0 2 11 3 0 0 0 0 0 0 0 prot.sequence ayveiieqpkqrgmRfRYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd >1vkx_AB:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF THE NFKB P50/P65 HETERODIMER COMPLEXED TO THE IMMUNOGLOBULIN KB DNA organism=MUS MUSCULUS DNA sequence DG(C2):DC(D24) DG(C3):DC(D23) DG(C4):DC(D22) DG(C5):DC(D21) DA(C6):DT(D20) DC(C7):DG(D19) DT(C8):DA(D18) DT(C9):DA(D17) DT(C10):DA(D16) DC(C11):DG(D15) DC(C12):DG(D14) chainA ( 15) ARG33 0 0 0 0 0 0 0 0 0 11 19 ( 17) ARG35 0 0 0 0 0 0 0 0 0 2 15 ( 18) TYR36 0 0 0 0 0 0 0 9 6 0 0 ( 20) CYS38 0 0 0 0 0 0 0 0 1 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 4 3 2 (169) ARG187 0 0 0 0 0 0 0 3 11 2 0 chainB ( 16) ARG354 0 0 8 10 6 0 0 0 0 0 0 ( 18) ARG356 0 7 16 2 0 0 0 0 0 0 0 ( 19) TYR357 0 0 0 0 8 9 0 0 0 0 0 ( 21) CYS359 0 0 0 0 2 0 0 0 0 0 0 ( 22) GLU360 0 0 0 4 3 0 0 0 0 0 0 ( 26) HIS364 0 18 9 0 0 0 0 0 0 0 0 (203) LYS541 0 0 0 0 1 9 2 0 0 0 0 prot.sequence ayveiieqpkqrgmRfRYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/gpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >1vol_AB:Cyclin-like;TATA-box_binding_protein-like; title=TFIIB (HUMAN CORE DOMAIN)/TBP (A.THALIANA)/TATA ELEMENT TERNARY COMPLEX organism=HOMO SAPIENS / ARABIDOPSIS THALIANA DNA sequence DC(D101):DG(C16) DA(D102):DT(C15) DG(D103):DC(C14) DC(D104):DG(C13) DC(D105):DG(C12) DC(D106):DG(C11) DT(D107):DA(C10) DT(D108):DA(C9) DT(D109):DA(C8) DT(D110):DA(C7) DA(D111):DT(C6) DT(D112):DA(C5) DA(D113):DT(C4) DG(D114):DC(C3) DC(D115):DG(C2) DC(D116):DG(C1) chainA chainB ( 16) ASN27 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 ( 18) VAL29 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 ( 46) PHE57 0 0 0 0 0 10 15 0 0 0 0 0 0 0 0 0 ( 61) LEU72 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 ( 63) PHE74 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 ( 69) VAL80 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 (106) ASN117 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 (108) VAL119 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 (137) PHE148 0 0 0 0 0 0 0 0 0 0 0 22 15 0 0 0 (138) PRO149 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 (152) LEU163 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 (154) PHE165 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (160) VAL171 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 (162) THR173 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 prot.sequence ammnafkeittmadrinlprnkvdrtnnlfrqayeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/vdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >1vol_B:TATA-box_binding_protein-like; title=TFIIB (HUMAN CORE DOMAIN)/TBP (A.THALIANA)/TATA ELEMENT TERNARY COMPLEX organism=ARABIDOPSIS THALIANA DNA sequence DG(C1):DC(D116) DG(C2):DC(D115) DC(C3):DG(D114) DT(C4):DA(D113) DA(C5):DT(D112) DT(C6):DA(D111) DA(C7):DT(D110) DA(C8):DT(D109) DA(C9):DT(D108) DA(C10):DT(D107) DG(C11):DC(D106) DG(C12):DC(D105) DG(C13):DC(D104) DC(C14):DG(D103) DT(C15):DA(D102) DG(C16):DC(D101) chainB ( 16) ASN27 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 ( 18) VAL29 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 ( 46) PHE57 0 0 0 0 0 0 0 0 0 15 10 0 0 0 0 0 ( 61) LEU72 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 ( 63) PHE74 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 ( 69) VAL80 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 (106) ASN117 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 (108) VAL119 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 (137) PHE148 0 0 0 15 22 0 0 0 0 0 0 0 0 0 0 0 (138) PRO149 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 (152) LEU163 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 (154) PHE165 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (160) VAL171 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 (162) THR173 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 prot.sequence vdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >1vpw_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF THE PURR MUTANT, L54M, BOUND TO HYPOXANTHINE AND PURF OPERATOR DNA organism=Escherichia coli DNA sequence DT(B699) DA(B700) DC(B701) DG(B702) DC(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DG(B712) DC(B713) DG(B714) DT(B715) chainA ( 12) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 2 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 24 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) MET54 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsMKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1vrl_A:DNA-glycosylase;Nudix; title=MUTY ADENINE GLYCOSYLASE IN COMPLEX WITH DNA AND SOAKED ADENINE FREE BASE organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DA(B2):DT(C22) DG(B3):DC(C21) DA(B4):DT(C20) DC(B5):DG(C19) 8OG(B6):HPD(C18) DT(B7):DA(C17) DG(B8):DC(C16) DG(B9):DC(C15) DA(B10):DT(C14) DC(B11):DG(C13) chainA ( 40) GLN48 0 0 0 40 4 7 0 0 0 0 ( 41) THR49 0 0 0 0 5 0 0 0 0 0 ( 42) ARG50 0 0 0 0 0 0 1 0 0 0 ( 80) TYR88 0 0 0 62 43 0 0 0 0 0 ( 83) ARG91 0 0 0 0 1 0 0 0 0 0 (293) PHE307 0 0 0 0 2 0 0 0 0 0 (294) SER308 0 0 0 8 8 1 0 0 0 0 (295) HIS309 0 0 0 8 0 0 0 0 0 0 prot.sequence parefqrdlldwfarerrdlpwrkdrdpykvwvsevmlQQtRvetvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavngnvmrvlsrlflvtddiakpstrkrfeqivreimayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqvplavavladdegrvlirkrdstgllanlwefpscetddgkekleqmvglqveltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >1vrr_AB:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF THE RESTRICTION ENDONUCLEASE BSTYI COMPLEX WITH DNA organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(D1):DA(C14) DT(D2):DA(C13) DA(D3):DT(C12) DT(D4):DA(C11) DA(D5):DT(C10) DG(D6):DC(C9) DA(D7):DT(C8) DT(D8):DA(C7) DC(D9):DG(C6) DT(D10):DA(C5) DA(D11):DT(C4) DT(D12):DA(C3) DA(D13):DT(C2) DA(D14):DT(C1) chainA ( 46) GLU46 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 48) THR48 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (115) TYR115 0 0 5 4 0 0 0 0 0 0 0 0 0 0 (133) LYS133 0 0 0 0 0 0 0 10 11 10 0 0 0 0 (134) TYR134 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (136) PHE136 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (172) SER172 0 0 0 0 0 0 0 0 0 6 1 0 0 0 (174) ILE174 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainB ( 46) GLU46 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 48) THR48 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 0 0 0 0 0 0 0 0 0 0 4 6 0 0 (133) LYS133 0 0 0 0 7 12 8 1 0 0 0 0 0 0 (134) TYR134 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (136) PHE136 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (172) SER172 0 0 0 1 7 1 0 0 0 0 0 0 0 0 (174) ILE174 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence mrivevyshlngleyiqvhlphiweeiqeiivsidaeacrtkeskEkTkqgqilyspvalneafkekleakgwkesRtnyyvtadpkliretlslepeeqkkvieaagkealksYnqtdfvkdrvaievqfgKYsFvaydlfvkhmafyvsdkidvgveilpmkelskemsSgIsyyegelynvirqgrgvpavplvligiap/mrivevyshlngleyiqvhlphiweeiqeiivsidaeacrtkeskEkTkqgqilyspvalneafkekleakgwkesrtnyyvtadpkliretlslepeeqkkvieaagkealksYnqtdfvkdrvaievqfgKYsFvaydlfvkhmafyvsdkidvgveilpmkelskemsSgIsyyegelynvirqgrgvpavplvligiap >1vrr_B:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF THE RESTRICTION ENDONUCLEASE BSTYI COMPLEX WITH DNA organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(D1):DA(C14) DT(D2):DA(C13) DA(D3):DT(C12) DT(D4):DA(C11) DA(D5):DT(C10) DG(D6):DC(C9) DA(D7):DT(C8) DT(D8):DA(C7) DC(D9):DG(C6) DT(D10):DA(C5) DA(D11):DT(C4) DT(D12):DA(C3) DA(D13):DT(C2) DA(D14):DT(C1) chainB ( 46) GLU46 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 48) THR48 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 0 0 0 0 0 0 0 0 0 0 4 6 0 0 (133) LYS133 0 0 0 0 7 12 8 1 0 0 0 0 0 0 (134) TYR134 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (136) PHE136 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (172) SER172 0 0 0 1 7 1 0 0 0 0 0 0 0 0 (174) ILE174 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence mrivevyshlngleyiqvhlphiweeiqeiivsidaeacrtkeskEkTkqgqilyspvalneafkekleakgwkesrtnyyvtadpkliretlslepeeqkkvieaagkealksYnqtdfvkdrvaievqfgKYsFvaydlfvkhmafyvsdkidvgveilpmkelskemsSgIsyyegelynvirqgrgvpavplvligiap >1vtl_E:TATA-box_binding_protein-like; title=CO-CRYSTAL STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF A TATA ELEMENT organism=ARABIDOPSIS THALIANA DNA sequence DT(B301):DA(A214) DG(B302):DC(A213) DC(B303):DG(A212) DC(B304):DG(A211) DC(B305):DG(A210) DT(B306):DA(A209) DT(B307):DA(A208) DT(B308):DA(A207) DT(B309):DA(A206) DA(B310):DT(A205) DT(B311):DA(A204) DA(B312):DT(A203) DG(B313):DC(A202) DC(B314):DG(A201) chainE ( 15) ASN27 0 0 0 0 0 0 0 5 9 0 0 0 0 0 ( 17) VAL29 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 45) PHE57 0 0 0 0 7 17 0 0 0 0 0 0 0 0 ( 60) LEU72 0 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 62) PHE74 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 68) VAL80 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 70) THR82 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (105) ASN117 0 0 0 0 0 0 0 6 5 0 0 0 0 0 (107) VAL119 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (136) PHE148 0 0 0 0 0 0 0 0 0 0 24 11 0 0 (137) PRO149 0 0 0 0 0 0 0 0 0 0 0 9 1 0 (151) LEU163 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (153) PHE165 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (159) VAL171 0 0 0 0 0 0 0 0 0 5 1 0 0 0 (161) THR173 0 0 0 0 0 0 0 0 6 3 0 0 0 0 prot.sequence dlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >1vtn_C:"Winged_helix"_DNA-binding_domain; title=CO-CRYSTAL STRUCTURE OF THE HNF-3/FORK HEAD DNA-RECOGNITION MOTIF RESEMBLES HISTONE H5 organism=Homo sapiens DNA sequence DG(B21):DC(A13) DG(B22):DC(A12) DT(B23):DA(A11) DT(B24):DA(A10) DG(B25):DC(A9) DA(B26):DT(A8) DC(B27):DG(A7) DT(B28):DA(A6) DT(B29):DA(A5) DA(B30):DT(A4) DG(B31):DC(A3) DT(B32):DA(A2) DC(B33):DG(A1) chainC ( 49) ASN165 0 0 0 10 4 0 0 0 0 0 0 0 0 ( 50) SER166 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 52) ARG168 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 53) HIS169 0 0 0 11 10 16 1 0 0 0 0 0 0 ( 56) SER172 0 0 6 1 0 0 0 0 0 0 0 0 0 ( 57) PHE173 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 94) ARG210 0 0 0 0 0 0 0 0 3 11 17 0 0 ( 98) ARG214 0 0 0 0 0 0 0 2 7 0 0 0 0 prot.sequence hakppysyislitmaiqqapgkmltlseiyqwimdlfpyyrenqqrwqNSiRHslSFndcfvkvarspdkpgkgsywalhpssgnmfengcylRrqkRfkla >1vto_A:TATA-box_binding_protein-like; title=1.9 A RESOLUTION REFINED STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF TATAAAAG organism=ARABIDOPSIS THALIANA DNA sequence DG(C201):DC(D228) DC(C202):DG(D227) DT(C203):DA(D226) DA(C204):DT(D225) DT(C205):DA(D224) DA(C206):DT(D223) DA(C207):DT(D222) DA(C208):DT(D221) DA(C209):DT(D220) DG(C210):DC(D219) DG(C211):DC(D218) DG(C212):DC(D217) DC(C213):DG(D216) DA(C214):DT(D215) chainA ( 16) ASN27 0 0 0 0 0 8 5 0 0 0 0 0 0 0 ( 18) VAL29 0 0 0 0 0 0 4 2 0 0 0 0 0 0 ( 46) PHE57 0 0 0 0 0 0 0 0 17 7 0 0 0 0 ( 61) LEU72 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 63) PHE74 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 69) VAL80 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (106) ASN117 0 0 0 0 0 5 6 0 0 0 0 0 0 0 (108) VAL119 0 0 0 0 2 5 0 0 0 0 0 0 0 0 (137) PHE148 0 0 13 25 0 0 0 0 0 0 0 0 0 0 (138) PRO149 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (152) LEU163 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (154) PHE165 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (160) VAL171 0 0 0 1 4 0 0 0 0 0 0 0 0 0 (162) THR173 0 0 0 0 2 7 0 0 0 0 0 0 0 0 prot.sequence vdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >1w0t_A:Homeodomain-like; title=HTRF1 DNA-BINDING DOMAIN IN COMPLEX WITH TELOMERIC DNA. organism=HOMO SAPIENS DNA sequence DT(C2):DA(D19) DG(C3):DC(D18) DT(C4):DA(D17) DT(C5):DA(D16) DA(C6):DT(D15) DG(C7):DC(D14) DG(C8):DC(D13) DG(C9):DC(D12) DT(C10):DA(D11) DT(C11):DA(D10) DA(C12):DT(D9) DG(C13):DC(D8) DG(C14):DC(D7) DG(C15):DC(D6) DT(C16):DA(D5) DT(C17):DA(D4) DA(C18):DT(D3) DG(C19):DC(D2) chainA ( 2) ARG380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 1 0 ( 39) SER417 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 40) VAL418 0 0 0 0 0 0 0 0 0 1 1 2 2 0 0 0 0 0 ( 43) LYS421 0 0 0 0 0 0 0 0 0 0 6 8 2 0 0 0 0 0 ( 44) ASP422 0 0 0 0 0 0 0 0 0 0 0 0 6 13 0 0 0 0 ( 47) ARG425 0 0 0 0 0 0 0 0 0 0 0 7 12 2 0 0 0 0 prot.sequence kRqawlweedknlrsgvrkygegnwskillhykfnnrtSVmlKDrwRtmkkl >1w0t_AB:Homeodomain-like; title=HTRF1 DNA-BINDING DOMAIN IN COMPLEX WITH TELOMERIC DNA. organism=HOMO SAPIENS DNA sequence DT(C2):DA(D19) DG(C3):DC(D18) DT(C4):DA(D17) DT(C5):DA(D16) DA(C6):DT(D15) DG(C7):DC(D14) DG(C8):DC(D13) DG(C9):DC(D12) DT(C10):DA(D11) DT(C11):DA(D10) DA(C12):DT(D9) DG(C13):DC(D8) DG(C14):DC(D7) DG(C15):DC(D6) DT(C16):DA(D5) DT(C17):DA(D4) DA(C18):DT(D3) DG(C19):DC(D2) chainA ( 2) ARG380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 1 0 ( 39) SER417 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 40) VAL418 0 0 0 0 0 0 0 0 0 1 1 2 2 0 0 0 0 0 ( 43) LYS421 0 0 0 0 0 0 0 0 0 0 6 8 2 0 0 0 0 0 ( 44) ASP422 0 0 0 0 0 0 0 0 0 0 0 0 6 13 0 0 0 0 ( 47) ARG425 0 0 0 0 0 0 0 0 0 0 0 7 12 2 0 0 0 0 chainB ( 2) ARG380 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 ( 39) SER417 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) VAL418 0 0 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS421 0 0 0 0 7 9 2 0 0 0 0 0 0 0 0 0 0 0 ( 44) ASP422 0 0 0 0 0 0 6 14 0 0 0 0 0 0 0 0 0 0 ( 47) ARG425 0 0 0 0 0 6 13 2 0 0 0 0 0 0 0 0 0 0 prot.sequence kRqawlweedknlrsgvrkygegnwskillhykfnnrtSVmlKDrwRtmkkl/kRqawlweedknlrsgvrkygegnwskillhykfnnrtSVmlKDrwRtmkkl >1w0u_A:Homeodomain-like; title=HTRF2 DNA-BINDING DOMAIN IN COMPLEX WITH TELOMERIC DNA. organism=HOMO SAPIENS DNA sequence DC(C3):DG(D17) DT(C4):DA(D16) DA(C5):DT(D15) DG(C6):DC(D14) DG(C7):DC(D13) DG(C8):DC(D12) DT(C9):DA(D11) DT(C10):DA(D10) DA(C11):DT(D9) DG(C12):DC(D8) DG(C13):DC(D7) DG(C14):DC(D6) DT(C15):DA(D5) DT(C16):DA(D4) DA(C17):DT(D3) DG(C18):DC(D2) chainA ( 2) LYS447 0 0 0 0 0 0 0 0 0 0 0 0 6 4 1 0 ( 40) VAL485 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 ( 43) LYS488 0 0 0 0 0 0 0 0 10 8 2 0 0 0 0 0 ( 44) ASP489 0 0 0 0 0 0 0 0 0 0 6 14 0 0 0 0 ( 47) ARG492 0 0 0 0 0 0 0 0 0 8 13 2 0 0 0 0 ( 48) THR493 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence kKqkwtveesewvkagvqkygegnwaaisknypfvnrtaVmiKDrwRTmkrlgmn >1w0u_AB:Homeodomain-like; title=HTRF2 DNA-BINDING DOMAIN IN COMPLEX WITH TELOMERIC DNA. organism=HOMO SAPIENS DNA sequence DC(D2):DG(C18) DT(D3):DA(C17) DA(D4):DT(C16) DA(D5):DT(C15) DC(D6):DG(C14) DC(D7):DG(C13) DC(D8):DG(C12) DT(D9):DA(C11) DA(D10):DT(C10) DA(D11):DT(C9) DC(D12):DG(C8) DC(D13):DG(C7) DC(D14):DG(C6) DT(D15):DA(C5) DA(D16):DT(C4) DG(D17):DC(C3) chainA ( 2) LYS447 0 1 4 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) VAL485 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 ( 43) LYS488 0 0 0 0 0 2 8 10 0 0 0 0 0 0 0 0 ( 44) ASP489 0 0 0 0 14 6 0 0 0 0 0 0 0 0 0 0 ( 47) ARG492 0 0 0 0 2 13 8 0 0 0 0 0 0 0 0 0 ( 48) THR493 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) LYS447 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 ( 40) VAL485 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 ( 43) LYS488 0 0 0 0 0 0 0 0 0 0 0 2 8 7 0 0 ( 44) ASP489 0 0 0 0 0 0 0 0 0 0 14 6 0 0 0 0 ( 47) ARG492 0 0 0 0 0 0 0 0 0 0 3 12 7 0 0 0 prot.sequence kKqkwtveesewvkagvqkygegnwaaisknypfvnrtaVmiKDrwRTmkrlgmn/kKqkwtveesewvkagvqkygegnwaaisknypfvnrtaVmiKDrwRtmkrlgmn >1w36_B:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like;?; title=RECBCD:DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DA(Y5):DT(Y39) DT(Y6):DA(Y38) DG(Y7):DC(Y37) DC(Y8):DG(Y36) DG(Y9):DC(Y35) DA(Y10):DT(Y34) DG(Y11):DC(Y33) DC(Y12):DG(Y32) DA(Y13):DT(Y31) DC(Y14):DG(Y30) DT(Y15):DA(Y29) DG(Y16):DC(Y28) DC(Y17):DG(Y27) DT(Y18):DA(Y26) DA(Y19):DT(Y25) chainB (249) SER249 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (252) ILE252 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (546) GLN562 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (808) ARG824 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence msdvaetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldalieSsgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvrsrQeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqrghgiaqdlmprldvdaagvasvveeptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryylldyksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag >1w36_BC:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=RECBCD:DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DA(Y5):DT(Y39) DT(Y6):DA(Y38) DG(Y7):DC(Y37) DC(Y8):DG(Y36) DG(Y9):DC(Y35) DA(Y10):DT(Y34) DG(Y11):DC(Y33) DC(Y12):DG(Y32) DA(Y13):DT(Y31) DC(Y14):DG(Y30) DT(Y15):DA(Y29) DG(Y16):DC(Y28) DC(Y17):DG(Y27) DT(Y18):DA(Y26) DA(Y19):DT(Y25) chainB (249) SER249 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (252) ILE252 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (546) GLN562 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (808) ARG824 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 chainC (1078) ASN1078 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1079) MET1079 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1080) MET1080 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1081) VAL1081 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence msdvaetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldalieSsgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvrsrQeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqrghgiaqdlmprldvdaagvasvveeptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryylldyksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag/mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfileglsryqinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegNMMVrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq >1w36_EF:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=RECBCD:DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DA(Z5):DT(Z39) DT(Z6):DA(Z38) DG(Z7):DC(Z37) DC(Z8):DG(Z36) DG(Z9):DC(Z35) DA(Z10):DT(Z34) DG(Z11):DC(Z33) DC(Z12):DG(Z32) DA(Z13):DT(Z31) DC(Z14):DG(Z30) DT(Z15):DA(Z29) DG(Z16):DC(Z28) DC(Z17):DG(Z27) DT(Z18):DA(Z26) DA(Z19):DT(Z25) chainE (249) SER249 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (252) ILE252 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (808) ARG824 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 chainF (1034) ASN1078 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1035) MET1079 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1036) MET1080 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1037) VAL1081 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence msdvaetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldalieSsgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqrghgiaqdlmprldvdaagvasvveeptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryylldyksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag/mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfileglsryqinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegNMMVrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq >1w7a_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=ATP BOUND MUTS organism=ESCHERICHIA COLI DNA sequence DA(E1):DT(F30) DG(E2):DC(F29) DC(E3):DG(F28) DT(E4):DA(F27) DG(E5):DC(F26) DC(E6):DG(F25) DC(E7):DG(F24) DA(E8):DT(F23) DG(E9):DT(F22) DG(E10):DC(F21) DC(E11):DG(F20) DA(E12):DT(F19) DC(E13):DG(F18) DC(E14):DG(F17) DA(E15):DT(F16) DG(E16):DC(F15) DT(E17):DA(F14) chainA ( 32) MET33 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 17 50 0 0 0 0 0 0 0 0 ( 37) GLU38 0 0 0 0 0 0 0 0 12 4 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 chainB prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgDFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgastfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/mqqylrlkaqhpeillfyrmgdfyelfyddaKrASqLldisltpmagipyhavenyLaklvnqgesVaicErkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgaaddsgrstfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >1wb9_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF E. COLI DNA MISMATCH REPAIR ENZYME MUTS, E38T MUTANT, IN COMPLEX WITH A G.T MISMATCH organism=ESCHERICHIA COLI DNA sequence DA(F14):DT(E17) DC(F15):DG(E16) DT(F16):DA(E15) DG(F17):DC(E14) DG(F18):DC(E13) DT(F19):DA(E12) DG(F20):DC(E11) DC(F21):DG(E10) DT(F22):DG(E9) DT(F23):DA(E8) DG(F24):DC(E7) DG(F25):DC(E6) DC(F26):DG(E5) DA(F27):DT(E4) DG(F28):DC(E3) DC(F29):DG(E2) DT(F30):DA(E1) chainA ( 32) MET33 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 0 47 16 0 0 0 0 0 0 0 ( 37) THR38 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 3 9 2 0 0 0 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 chainB prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgDFyTlfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/mqqylrlkaqhpeillfyrmgdfytlfyddaKrASqLldisltpmagipyhavenyLaklvnqgesVaicErkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgtfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >1wbb_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF E. COLI DNA MISMATCH REPAIR ENZYME MUTS, E38A MUTANT, IN COMPLEX WITH A G.T MISMATCH organism=ESCHERICHIA COLI DNA sequence DA(F14):DT(E17) DC(F15):DG(E16) DT(F16):DA(E15) DG(F17):DC(E14) DG(F18):DC(E13) DT(F19):DA(E12) DG(F20):DC(E11) DC(F21):DG(E10) DT(F22):DG(E9) DT(F23):DA(E8) DG(F24):DC(E7) DG(F25):DC(E6) DC(F26):DG(E5) DA(F27):DT(E4) DG(F28):DC(E3) DC(F29):DG(E2) DT(F30):DA(E1) chainA ( 32) MET33 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 0 51 17 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 1 7 4 0 0 0 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 chainB prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgDFyalfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/mqqylrlkaqhpeillfyrmgdfyalfyddaKrASqlldisltpmagipyhavenyLaklvnqgesVaicErkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgtfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >1wbd_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF E. COLI DNA MISMATCH REPAIR ENZYME MUTS, E38Q MUTANT, IN COMPLEX WITH A G.T MISMATCH organism=ESCHERICHIA COLI DNA sequence DA(E1):DT(F30) DG(E2):DC(F29) DC(E3):DG(F28) DT(E4):DA(F27) DG(E5):DC(F26) DC(E6):DG(F25) DC(E7):DG(F24) DA(E8):DT(F23) DG(E9):DT(F22) DG(E10):DC(F21) DC(E11):DG(F20) DA(E12):DT(F19) DC(E13):DG(F18) DC(E14):DG(F17) DA(E15):DT(F16) DG(E16):DC(F15) DT(E17):DA(F14) chainA ( 32) MET33 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 16 45 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 chainB prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgDFyQlfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/mqqylrlkaqhpeillfyrmgdfyqlfyddaKrASqLldisltpmagipyhavenyLaklvnqgesVaicErkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgtfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >1wd0_A:Chromo_domain-like; title=CRYSTAL STRUCTURES OF THE HYPERTHERMOPHILIC CHROMOSOMAL PROTEIN SAC7D IN COMPLEX WITH DNA DECAMERS organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DC(B102):DG(C119) DT(B103):DA(C118) DA(B104):DT(C117) DT(B105):DA(C116) DA(B106):DT(C115) DT(B107):DA(C114) DA(B108):DT(C113) DG(B109):DC(C112) chainA ( 24) TRP24 0 0 0 0 9 5 0 0 ( 26) VAL26 0 0 0 3 3 0 0 0 ( 29) MET29 0 0 0 18 9 0 0 0 ( 31) SER31 0 0 0 0 4 0 0 0 ( 42) ARG42 0 0 0 0 0 1 7 3 ( 44) ALA44 0 0 0 0 1 0 0 0 prot.sequence mvkvkfkykgeekevdtskikkvWrVgkMvSftyddngktgRgAvsekdapkelldmlaraerekk >1wd1_A:Chromo_domain-like; title=CRYSTAL STRUCTURES OF THE HYPERTHERMOPHILIC CHROMOSOMAL PROTEIN SAC7D IN COMPLEX WITH DNA DECAMERS organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DC(C112):DG(B109) DT(C113):DA(B108) DA(C114):DT(B107) DC(C115):DG(B106) DG(C116):DC(B105) DT(C117):DA(B104) DA(C118):DT(B103) DG(C119):DC(B102) chainA ( 23) TRP24 0 0 5 12 0 0 0 0 ( 25) VAL26 0 0 0 12 4 0 0 0 ( 28) MET29 0 0 0 8 10 0 0 0 ( 30) SER31 0 0 0 4 0 0 0 0 ( 41) ARG42 0 8 10 0 0 0 0 0 ( 43) ALA44 0 0 0 1 0 0 0 0 prot.sequence vkvkfkykgeekevdtskikkvWrVgkMvSftyddngktgRgAvsekdapkelldmlaraerek >1wet_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF THE PURR-GUANINE-PURF OPERATOR COMPLEX organism=ESCHERICHIA COLI DNA sequence DA(B699) DA(B700) DC(B701) DG(B702) DA(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DT(B712) DC(B713) DG(B714) DT(B715) chainA ( 12) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 23 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1wte_A:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF TYPE II RESTRCITION ENDONUCLEASE, ECOO109I COMPLEXED WITH COGNATE DNA organism=ESCHERICHIA COLI DNA sequence DA(X1):DT(Y13) DC(X2):DG(Y12) DC(X3):DG(Y11) DG(X4):DC(Y10) DG(X5):DC(Y9) DG(X6):DC(Y8) DC(X7):DG(Y7) DC(X8):DG(Y6) DC(X9):DG(Y5) DT(X10):DA(Y4) DG(X11):DC(Y3) DC(X12):DG(Y2) DC(X13):DG(Y1) chainA ( 66) THR66 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 70) THR70 0 0 0 0 4 10 0 0 0 0 0 0 0 ( 74) LYS74 0 0 0 7 0 0 0 0 0 0 0 0 0 (130) TRP130 0 0 0 0 0 0 0 1 24 4 0 0 0 (131) THR131 0 0 0 0 0 0 2 0 0 0 0 0 0 (133) GLN133 0 0 0 0 0 0 2 12 8 0 0 0 0 (134) LEU134 0 0 0 0 0 0 0 0 2 0 0 0 0 (136) MET136 0 0 0 0 0 0 4 0 0 0 0 0 0 (172) ASP172 0 0 0 0 0 0 0 0 0 0 2 0 0 (173) LYS173 0 0 0 0 0 0 0 0 8 7 0 0 0 prot.sequence mnkqevilkvqecaawwilerqskltklmsetmsinpfmtpfifdyhslndfdelveaiiakhlmTghdTgfgKlidekilprvfgaykldksyraanepfihpcfdeidhviqrddgriellslkagkWTiQLtMavqlnkafheiinnypgvadnivvgvfygnshgltDKyrilrgintganhnvidirdkvhvyagkefwswlnngeaetqhwvlegieravkeadikeknkdliekfkehvakkyneqvlnadgtaqwhkllemine >1wte_AB:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF TYPE II RESTRCITION ENDONUCLEASE, ECOO109I COMPLEXED WITH COGNATE DNA organism=ESCHERICHIA COLI DNA sequence DG(Y1):DC(X13) DG(Y2):DC(X12) DC(Y3):DG(X11) DA(Y4):DT(X10) DG(Y5):DC(X9) DG(Y6):DC(X8) DG(Y7):DC(X7) DC(Y8):DG(X6) DC(Y9):DG(X5) DC(Y10):DG(X4) DG(Y11):DC(X3) DG(Y12):DC(X2) DT(Y13):DA(X1) chainA ( 66) THR66 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 70) THR70 0 0 0 0 0 0 0 10 4 0 0 0 0 ( 74) LYS74 0 0 0 0 0 0 0 0 0 7 0 0 0 (130) TRP130 0 0 0 4 24 1 0 0 0 0 0 0 0 (131) THR131 0 0 0 0 0 0 2 0 0 0 0 0 0 (133) GLN133 0 0 0 0 8 12 2 0 0 0 0 0 0 (134) LEU134 0 0 0 0 2 0 0 0 0 0 0 0 0 (136) MET136 0 0 0 0 0 0 4 0 0 0 0 0 0 (172) ASP172 0 0 2 0 0 0 0 0 0 0 0 0 0 (173) LYS173 0 0 0 7 8 0 0 0 0 0 0 0 0 chainB ( 32) THR32 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 66) THR66 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 70) THR70 0 0 0 0 2 9 0 0 0 0 0 0 0 ( 74) LYS74 0 0 0 3 0 0 0 0 0 0 0 0 0 (130) TRP130 0 0 0 0 0 0 0 0 23 1 0 0 0 (131) THR131 0 0 0 0 0 0 2 0 0 0 0 0 0 (133) GLN133 0 0 0 0 0 0 5 13 8 0 0 0 0 (134) LEU134 0 0 0 0 0 0 0 0 2 0 0 0 0 (136) MET136 0 0 0 0 0 0 1 0 0 0 0 0 0 (172) ASP172 0 0 0 0 0 0 0 0 0 1 1 0 0 (173) LYS173 0 0 0 0 0 0 0 0 5 7 0 0 0 prot.sequence mnkqevilkvqecaawwilerqskltklmsetmsinpfmtpfifdyhslndfdelveaiiakhlmTghdTgfgKlidekilprvfgaykldksyraanepfihpcfdeidhviqrddgriellslkagkWTiQLtMavqlnkafheiinnypgvadnivvgvfygnshgltDKyrilrgintganhnvidirdkvhvyagkefwswlnngeaetqhwvlegieravkeadikeknkdliekfkehvakkyneqvlnadgtaqwhkllemine/mnkqevilkvqecaawwilerqskltklmseTmsinpfmtpfifdyhslndfdelveaiiakhlmTghdTgfgKlidekilprvfgaykldksyraanepfihpcfdeidhviqrddgriellslkagkWTiQLtMavqlnkafheiinnypgvadnivvgvfygnshgltDKyrilrgintganhnvidirdkvhvyagkefwswlnngeaetqhwvlegieravkeadikeknkdliekfkehvakkyneqvlnadgtaqwhkllemine >1wto_A:Chromo_domain-like; title=HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D DOUBLE MUTANT V26F/M29F IN COMPLEX WITH DNA GCGATCGC organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DG(B101):DC(C116) DC(B102):DG(C115) DG(B103):DC(C114) DA(B104):DT(C113) DT(B105):DA(C112) DC(B106):DG(C111) DG(B107):DC(C110) DC(B108):DG(C109) chainA ( 23) TRP24 0 0 11 7 0 0 0 0 ( 25) PHE26 0 24 48 0 0 0 0 0 ( 28) PHE29 0 6 0 0 0 0 0 0 ( 30) SER31 0 0 4 0 0 0 0 0 ( 41) ARG42 0 0 0 8 6 1 0 0 prot.sequence vkvkfkykgeekevdtskikkvWrFgkFvSftyddngktgRgavsekdapkelldmlaraerekk >1wtp_B:Chromo_domain-like; title=HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT M29F IN COMPLEX WITH DNA GCGA(UBR)CGC organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DG(F109):DC(E108) DC(F110):DG(E107) DG(F111):DC(E106) DA(F112):BRU(E105) BRU(F113):DA(E104) DC(F114):DG(E103) DG(F115):DC(E102) DC(F116):DG(E101) chainB ( 7) TYR8 0 0 0 0 3 1 0 0 ( 23) TRP24 0 0 0 0 2 12 0 0 ( 25) VAL26 0 0 0 0 0 11 5 0 ( 28) PHE29 0 0 0 0 0 13 17 0 ( 30) SER31 0 0 0 0 0 4 0 0 ( 41) ARG42 0 0 6 9 4 0 0 0 ( 43) ALA44 0 0 0 0 0 1 0 0 prot.sequence vkvkfkYkgeekevdtskikkvWrVgkFvSftyddngktgRgAvsekdapkelldmlaraerek >1wtq_A:Chromo_domain-like; title=HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT M29F IN COMPLEX WITH DNA GTAATTAC organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DG(C109):DC(B108) DT(C110):DA(B107) DA(C111):DT(B106) DA(C112):DT(B105) DT(C113):DA(B104) DT(C114):DA(B103) DA(C115):DT(B102) DC(C116):DG(B101) chainA ( 7) TYR8 0 0 0 1 0 0 0 0 ( 23) TRP24 0 0 0 5 7 0 0 0 ( 25) VAL26 0 0 0 0 12 5 0 0 ( 28) PHE29 0 0 0 0 8 11 0 0 ( 30) SER31 0 0 0 0 2 0 0 0 ( 41) ARG42 0 8 6 0 0 0 0 0 prot.sequence vkvkfkYkgeekevdtskikkvWrVgkFvSftyddngktgRgavsekdapkelldmlaraerek >1wtr_A:Chromo_domain-like; title=HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT M29A IN COMPLEX WITH DNA GCGATCGC organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DG(B101):DC(C116) DC(B102):DG(C115) DG(B103):DC(C114) DA(B104):DT(C113) DT(B105):DA(C112) DC(B106):DG(C111) DG(B107):DC(C110) DC(B108):DG(C109) chainA ( 8) TYR8 0 0 0 2 0 0 0 0 ( 24) TRP24 0 0 12 2 0 0 0 0 ( 26) VAL26 0 7 17 0 0 0 0 0 ( 29) ALA29 0 1 0 0 0 0 0 0 ( 31) SER31 0 0 5 0 0 0 0 0 ( 42) ARG42 0 0 0 0 8 8 0 0 ( 44) ALA44 0 0 1 0 0 0 0 0 prot.sequence mvkvkfkYkgeekevdtskikkvWrVgkAvSftyddngktgRgAvsekdapkelldmlaraerekk >1wtv_A:Chromo_domain-like; title=HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT M29A IN COMPLEX WITH DNA GTAATTAC organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DG(B101):DC(C116) DT(B102):DA(C115) DA(B103):DT(C114) DA(B104):DT(C113) DT(B105):DA(C112) DT(B106):DA(C111) DA(B107):DT(C110) DC(B108):DG(C109) chainA ( 7) TYR8 0 0 0 0 1 0 0 0 ( 23) TRP24 0 0 0 7 3 0 0 0 ( 25) VAL26 0 0 5 16 0 0 0 0 ( 28) ALA29 0 0 1 0 0 0 0 0 ( 30) SER31 0 0 0 3 0 0 0 0 ( 41) ARG42 0 0 0 0 0 7 8 0 ( 43) ALA44 0 0 0 1 0 0 0 0 prot.sequence vkvkfkYkgeekevdtskikkvWrVgkAvSftyddngktgRgAvsekdapkelldmlaraerek >1wtw_A:Chromo_domain-like; title=HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT V26A IN COMPLEX WITH DNA GCGATCGC organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DG(C109):DC(B108) DC(C110):DG(B107) DG(C111):DC(B106) DA(C112):DT(B105) DT(C113):DA(B104) DC(C114):DG(B103) DG(C115):DC(B102) DC(C116):DG(B101) chainA ( 8) TYR8 0 0 0 0 1 0 0 0 ( 24) TRP24 0 0 0 0 2 10 0 0 ( 26) ALA26 0 0 0 0 0 2 3 0 ( 29) MET29 0 0 0 0 0 13 15 0 ( 31) SER31 0 0 0 0 0 5 0 0 ( 42) ARG42 0 0 5 7 0 0 0 0 ( 44) ALA44 0 0 0 0 0 1 0 0 prot.sequence mvkvkfkYkgeekevdtskikkvWrAgkMvSftyddngktgRgAvsekdapkelldmlaraerekk >1wtx_A:Chromo_domain-like; title=HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT V26A IN COMPLEX WITH DNA GTAATTAC organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DG(B101):DC(C116) DT(B102):DA(C115) DA(B103):DT(C114) DA(B104):DT(C113) DT(B105):DA(C112) DT(B106):DA(C111) DA(B107):DT(C110) DC(B108):DG(C109) chainA ( 24) TRP24 0 0 0 8 4 0 0 0 ( 26) ALA26 0 0 3 3 0 0 0 0 ( 29) MET29 0 0 18 13 0 0 0 0 ( 31) SER31 0 0 0 4 0 0 0 0 ( 42) ARG42 0 0 0 0 0 7 6 0 ( 44) ALA44 0 0 0 1 0 0 0 0 prot.sequence mvkvkfkykgeekevdtskikkvWrAgkMvSftyddngktgRgAvsekdapkelldmlaraerekk >1wvl_A:Chromo_domain-like; title=CRYSTAL STRUCTURE OF MULTIMERIC DNA-BINDING PROTEIN SAC7D-GCN4 WITH DNA DECAMER organism=Sulfolobus acidocaldarius DNA sequence DC(D111):DG(C110) DC(D112):DG(C109) DT(D113):DA(C108) DA(D114):DT(C107) DT(D115):DA(C106) DA(D116):DT(C105) DT(D117):DA(C104) DA(D118):DT(C103) DG(D119):DC(C102) chainA ( 8) TYR8 0 0 0 1 0 0 0 0 0 ( 24) TRP24 0 0 0 4 11 0 0 0 0 ( 26) VAL26 0 0 0 0 10 6 0 0 0 ( 29) MET29 0 0 0 0 9 19 0 0 0 ( 31) SER31 0 0 0 0 5 0 0 0 0 ( 42) ARG42 0 3 12 0 0 0 0 0 0 ( 44) ALA44 0 0 0 0 1 0 0 0 0 prot.sequence mvkvkfkYkgeekevdtskikkvWrVgkMvSftyddngktgRgAvsekdapkelldmlaraerekkgvlkklravenelh >1x9m_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=T7 DNA POLYMERASE IN COMPLEX WITH AN N-2-ACETYLAMINOFLUORENE-ADDUCTED DNA organism=ENTEROBACTERIA PHAGE T7 DNA sequence DA(D5):2DT(C22) DT(D6):DA(C21) DC(D7):DG(C20) DA(D8):DT(C19) DC(D9):DG(C18) DA(D10):DT(C17) DC(D11):DG(C16) DT(D12):DA(C15) DA(D13):DT(C14) DC(D14):DG(C13) chainA (375) LYS394 0 0 0 5 1 0 0 0 0 0 (410) ARG429 8 2 0 0 0 0 0 0 0 0 (417) ASN436 0 0 1 0 0 0 0 0 0 0 (420) GLN439 0 0 11 5 0 0 0 0 0 0 (511) TYR530 45 0 0 0 0 0 0 0 0 0 (586) GLN615 2 0 0 0 0 0 0 0 0 0 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggifkceldtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflYgagdekigqivgagkergkelkkkflentpaiaalresiqqtlvevkwkrrwikgldgrkvhvrsphaalntllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1x9n_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF HUMAN DNA LIGASE I BOUND TO 5'-ADENYLATED, NICKED DNA organism=Homo sapiens DNA sequence DC(D7):DG(C9) DA(D8):DT(C8) DG(D9):DC(C7) DT(D10):DA(C6) DC(D11):DG(C5) DC(D12):DG(C4) DG(D13):DC(C3) DA(D14):DT(C2) DC(D15):DG(C1) chainA ( 44) ARG305 0 0 2 7 3 0 0 0 0 (501) LYS770 0 0 0 0 0 0 6 2 0 (529) THR798 0 0 0 0 0 0 2 5 0 (603) PHE872 0 0 0 0 0 0 0 0 1 prot.sequence dpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsaRlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglelgvgdgvllkavaqatgrqlesvraeaaekgdvglvaemlppppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlrlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlahptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrnqedntgkypdiisripkiklpsvtsfildteavawdrekkqiqpfqvlttrkrkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdyldgvgdtldlvvigaylgrgKragryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislrFprfirvredkqpeqattsaqvaclyrkqs >1x9s_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=T7 DNA POLYMERASE IN COMPLEX WITH A PRIMER/TEMPLATE DNA CONTAINING A DISORDERED N-2 AMINOFLUORENE ON THE TEMPLATE, CRYSTALLIZED WITH DIDEOXY-CTP AS THE INCOMING NUCLEOTIDE. organism=ENTEROBACTERIA PHAGE T7 DNA sequence DA(T5):2DT(P22) DT(T6):DA(P21) DC(T7):DG(P20) DA(T8):DT(P19) DC(T9):DG(P18) DA(T10):DT(P17) DC(T11):DG(P16) DT(T12):DA(P15) DA(T13):DT(P14) DC(T14):DG(P13) DC(T15):DG(P12) chainA (374) LYS394 0 0 2 5 0 0 0 0 0 0 0 (409) ARG429 8 2 0 0 0 0 0 0 0 0 0 (416) ASN436 0 0 1 0 0 0 0 0 0 0 0 (419) GLN439 0 0 7 5 0 0 0 0 0 0 0 (510) TYR530 25 0 0 0 0 0 0 0 0 0 0 (584) GLN615 2 0 0 0 0 0 0 0 0 0 0 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggifceldtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflYgagdekigqivgagkergkelkkkflentpaiaalresiqqtlvekwkrrwikgldgrkvhvrsphaalntllQsagalicklwiikteemlvekglkhgwdgdfaymawvhdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1x9w_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=T7 DNA POLYMERASE IN COMPLEX WITH A PRIMER/TEMPLATE DNA CONTAINING A DISORDERED N-2 AMINOFLUORENE ON THE TEMPLATE, CRYSTALLIZED WITH DIDEOXY-ATP AS THE INCOMING NUCLEOTIDE. organism=ENTEROBACTERIA PHAGE T7 DNA sequence DG(C12):DC(D15) DG(C13):DC(D14) DT(C14):DA(D13) DA(C15):DT(D12) DG(C16):DC(D11) DT(C17):DA(D10) DG(C18):DC(D9) DT(C19):DA(D8) DG(C20):DC(D7) DA(C21):DT(D6) 2DT(C22):DA(D5) chainA (374) LYS394 0 0 0 0 0 0 0 4 2 0 0 (409) ARG429 0 0 0 0 0 0 0 0 0 1 5 (416) ASN436 0 0 0 0 0 0 0 0 1 0 0 (419) GLN439 0 0 0 0 0 0 0 6 8 0 0 (510) TYR530 0 0 0 0 0 0 0 0 0 0 17 (584) GLN615 0 0 0 0 0 0 0 0 0 0 2 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggifceldtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflYgagdekigqivgagkergkelkkkflentpaiaalresiqqtlvekwkrrwikgldgrkvhvrsphaalntllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1xbr_AB:p53-like_transcription_factors; title=T DOMAIN FROM XENOPUS LAEVIS BOUND TO DNA organism=XENOPUS LAEVIS DNA sequence DA(C501):DT(D524) DA(C502):DT(D523) DT(C503):DA(D522) DT(C504):DA(D521) DT(C505):DA(D520) DC(C506):DG(D519) DA(C507):DT(D518) DC(C508):DG(D517) DA(C509):DT(D516) DC(C510):DG(D515) DC(C511):DG(D514) DT(C512):DA(D513) DA(C513):DT(D512) DG(C514):DC(D511) DG(C515):DC(D510) DT(C516):DA(D509) DG(C517):DC(D508) DT(C518):DA(D507) DG(C519):DC(D506) DA(C520):DT(D505) DA(C521):DT(D504) DA(C522):DT(D503) DT(C523):DA(D502) DT(C524):DA(D501) chainA ( 29) ARG67 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) THR194 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) ALA195 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) PHE211 0 0 0 0 0 0 0 0 0 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 (177) PHE215 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 29) ARG67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 (156) THR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 (157) ALA195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (173) PHE211 0 0 0 0 0 0 0 0 0 0 0 0 3 2 3 0 0 0 0 0 0 0 0 0 (177) PHE215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 prot.sequence elkvsleerdlwtrfkeltnemivtkngRrmfpvlkvsmsgldpnamytvlldfvaadnhrwkyvngewvpggkpepqapscvyihpdspnfgahwmkdpvsfskvkltnkmngggqimlnslhkyeprihivrvggtqrmitshsfpetqfiavTAyqneeitalkikhnpFakaFldakern/elkvsleerdlwtrfkeltnemivtkngRrmfpvlkvsmsgldpnamytvlldfvaadnhrwkyvngewvpggkpepqapscvyihpdspnfgahwmkdpvsfskvkltnkmngggqimlnslhkyeprihivrvggtqrmitshsfpetqfiavTAyqneeitalkikhnpFakaFldaker >1xbr_B:p53-like_transcription_factors; title=T DOMAIN FROM XENOPUS LAEVIS BOUND TO DNA organism=XENOPUS LAEVIS DNA sequence DA(C501):DT(D524) DA(C502):DT(D523) DT(C503):DA(D522) DT(C504):DA(D521) DT(C505):DA(D520) DC(C506):DG(D519) DA(C507):DT(D518) DC(C508):DG(D517) DA(C509):DT(D516) DC(C510):DG(D515) DC(C511):DG(D514) DT(C512):DA(D513) DA(C513):DT(D512) DG(C514):DC(D511) DG(C515):DC(D510) DT(C516):DA(D509) DG(C517):DC(D508) DT(C518):DA(D507) DG(C519):DC(D506) DA(C520):DT(D505) DA(C521):DT(D504) DA(C522):DT(D503) DT(C523):DA(D502) DT(C524):DA(D501) chainB ( 29) ARG67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 (156) THR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 (157) ALA195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (173) PHE211 0 0 0 0 0 0 0 0 0 0 0 0 3 2 3 0 0 0 0 0 0 0 0 0 (177) PHE215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 prot.sequence elkvsleerdlwtrfkeltnemivtkngRrmfpvlkvsmsgldpnamytvlldfvaadnhrwkyvngewvpggkpepqapscvyihpdspnfgahwmkdpvsfskvkltnkmngggqimlnslhkyeprihivrvggtqrmitshsfpetqfiavTAyqneeitalkikhnpFakaFldaker >1xc8_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE COMPLEX BETWEEN THE WILD-TYPE LACTOCOCCUS LACTIS FPG (MUTM) AND A FAPY-DG CONTAINING DNA organism=Lactococcus lactis subsp. cremoris DNA sequence DC(C16):DG(B14) DG(C17):DC(B13) DA(C18):DT(B12) DG(C19):DC(B11) DA(C20):DT(B10) DA(C21):DT(B9) DA(C22):DT(B8) DC(C23):FOX(B7) DA(C24):DT(B6) DA(C25):DT(B5) DA(C26):DT(B4) DG(C27):DC(B3) DA(C28):DT(B2) chainA ( 5) GLU5 0 0 0 0 0 0 0 7 0 0 0 0 0 ( 74) ARG74 0 0 0 0 0 3 12 0 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 24 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 0 0 0 2 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 2 15 35 0 0 0 0 (111) PHE111 0 0 0 0 0 0 72 11 0 0 0 0 0 (172) ILE172 0 0 0 0 0 0 0 5 0 0 0 0 0 (217) SER217 0 0 0 0 0 0 0 1 0 0 0 0 0 (219) ILE219 0 0 0 0 0 0 0 10 0 0 0 0 0 (220) ARG220 0 0 0 0 0 0 0 3 0 0 0 0 0 (221) THR221 0 0 0 0 0 0 0 8 0 0 0 0 0 (222) TYR222 0 0 0 0 0 0 0 8 0 0 0 0 0 (260) ARG260 0 0 0 0 0 1 10 0 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssirtysalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >1xc9_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF A HIGH-FIDELITY POLYMERASE BOUND TO A BENZO[A]PYRENE ADDUCT THAT BLOCKS REPLICATION organism=Geobacillus stearothermophilus DNA sequence DG(B20):DC(C13) DG(B21):DC(C12) DG(B22):DC(C11) DA(B23):DT(C10) DT(B24):DA(C9) DG(B25):DC(C8) DG(B26):DC(C7) DT(B27):DA(C6) DG(B28):DC(C5) DC(B29):DG(C4) chainA (286) LYS582 0 0 0 0 0 2 6 0 0 0 (291) TYR587 0 0 0 0 0 0 0 1 0 0 (329) ASN625 0 0 0 0 0 0 2 4 0 0 (333) ARG629 0 0 0 0 0 0 0 0 0 4 (418) TYR714 0 0 0 0 0 0 0 0 0 21 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgrlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >1xhu_ABCD:Restriction_endonuclease-like; title=HINCII BOUND TO CLEAVED, COGNATE DNA CONTAINING GTCGAC organism=Haemophilus influenzae DNA sequence DC(K3):DG(J12) DG(K4):DC(J11) DG(K5):DC(J10) DT(K6):DA(J9) DC(K7):DG(J8) DG(L8):DC(I7) DA(L9):DT(I6) DC(L10):DG(I5) DC(L11):DG(I4) DG(L12):DC(I3) DG(E1):DC(I2) DC(E2):DG(I1) DC(E3):DG(H12) DG(E4):DC(H11) DG(E5):DC(H10) DT(E6):DA(H9) DC(E7):DG(H8) DG(F8):DC(G7) DA(F9):DT(G6) DC(F10):DG(G5) DC(F11):DG(G4) DG(F12):DC(G3) chainA ( 30) HIS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 (108) GLN109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 1 0 0 (109) ASN110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (136) ALA137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (137) GLN138 0 0 0 0 0 0 0 0 0 0 0 0 0 47 28 0 0 0 0 0 0 0 (139) PRO140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (140) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 7 3 0 0 0 0 (198) TYR199 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (200) ASN201 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 (202) ALA203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (203) ALA204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 (204) ALA205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 chainB ( 30) HIS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 (108) GLN109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 6 0 0 0 0 0 (135) SER136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (137) GLN138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 46 0 (139) PRO140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (140) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 15 0 0 0 (198) TYR199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (200) ASN201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 (202) ALA203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (203) ALA204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 (204) ALA205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 chainC ( 30) HIS31 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) GLN109 0 0 3 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) SER136 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) GLN138 0 0 0 0 0 0 0 26 43 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PRO140 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) ASN141 0 0 0 0 3 9 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) TYR199 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASN201 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ALA203 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ALA204 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) ALA205 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) GLN209 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 30) HIS31 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLN109 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ASN110 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) GLN138 0 40 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) PRO140 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) ASN141 0 0 1 16 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) TYR199 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASN201 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ALA203 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ALA204 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ALA205 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN209 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrnisksAQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmqiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQndtadillvkdqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmqiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi/sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsifeekQndtadillvkdqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmqiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrnisksaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmqiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >1xhu_B:Restriction_endonuclease-like; title=HINCII BOUND TO CLEAVED, COGNATE DNA CONTAINING GTCGAC organism=Haemophilus influenzae DNA sequence DC(G3):DG(F12) DG(G4):DC(F11) DG(G5):DC(F10) DT(G6):DA(F9) DC(G7):DG(F8) DG(H8):DC(E7) DA(H9):DT(E6) DC(H10):DG(E5) DC(H11):DG(E4) DG(H12):DC(E3) DG(I1):DC(E2) DC(I2):DG(E1) DC(I3):DG(L12) DG(I4):DC(L11) DG(I5):DC(L10) DT(I6):DA(L9) DC(I7):DG(L8) DG(J8):DC(K7) DA(J9):DT(K6) DC(J10):DG(K5) DC(J11):DG(K4) DG(J12):DC(K3) chainB ( 30) HIS31 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLN109 0 0 0 0 0 6 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER136 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) GLN138 0 46 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) PRO140 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) ASN141 0 0 0 15 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) TYR199 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASN201 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ALA203 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ALA204 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ALA205 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN209 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQndtadillvkdqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmqiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >1xhv_ABCD:Restriction_endonuclease-like; title=HINCII BOUND TO CLEAVED COGNATE DNA GTCGAC AND MN2+ organism=Haemophilus influenzae DNA sequence DC(K3):DG(J12) DG(K4):DC(J11) DG(K5):DC(J10) DT(K6):DA(J9) DC(K7):DG(J8) DG(L8):DC(I7) DA(L9):DT(I6) DC(L10):DG(I5) DC(L11):DG(I4) DG(L12):DC(I3) DG(E1):DC(I2) DC(E2):DG(I1) DC(E3):DG(H12) DG(E4):DC(H11) DG(E5):DC(H10) DT(E6):DA(H9) DC(E7):DG(H8) DG(F8):DC(G7) DA(F9):DT(G6) DC(F10):DG(G5) DC(F11):DG(G4) DG(F12):DC(G3) chainA (105) GLN109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 4 0 0 (106) ASN110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (134) GLN138 0 0 0 0 0 0 0 0 0 0 0 0 0 40 30 0 0 0 0 0 0 0 (136) PRO140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (137) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 8 3 0 0 0 0 (195) TYR199 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (197) ASN201 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 (199) ALA203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (200) ALA204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 (201) ALA205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 (203) GLN207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (205) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 chainB ( 26) HIS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 (104) GLN109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 6 0 0 0 0 0 (105) ASN110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (131) SER136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (133) GLN138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 34 0 (135) PRO140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (136) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 12 0 0 0 (194) TYR199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (196) ASN201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 (198) ALA203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (199) ALA204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 (200) ALA205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 (202) GLN207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (204) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 chainC (100) GLN109 0 0 1 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) GLN138 0 0 0 0 0 0 0 28 40 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PRO140 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ASN141 0 0 0 0 3 8 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) TYR199 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) ASN201 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) ALA203 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) ALA204 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) ALA205 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) GLN207 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) GLN209 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 99) GLN109 0 0 0 0 0 6 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASN110 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) SER136 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) GLN138 0 36 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PRO140 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ASN141 0 0 0 15 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) TYR199 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) ASN201 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) ALA203 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) ALA204 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) ALA205 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) GLN207 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) GLN209 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrptlsghaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrnisksaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqkvkrpksgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi/sfikpiyqdinsiligqkvkrpksggepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwienlfeekQndtadillvkqfyelldvktrnisksaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi/sfikpiyqdinsiligqkvkraagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >1xhv_B:Restriction_endonuclease-like; title=HINCII BOUND TO CLEAVED COGNATE DNA GTCGAC AND MN2+ organism=Haemophilus influenzae DNA sequence DC(K3):DG(J12) DG(K4):DC(J11) DG(K5):DC(J10) DT(K6):DA(J9) DC(K7):DG(J8) DG(L8):DC(I7) DA(L9):DT(I6) DC(L10):DG(I5) DC(L11):DG(I4) DG(L12):DC(I3) DG(E1):DC(I2) DC(E2):DG(I1) DC(E3):DG(H12) DG(E4):DC(H11) DG(E5):DC(H10) DT(E6):DA(H9) DC(E7):DG(H8) DG(F8):DC(G7) DA(F9):DT(G6) DC(F10):DG(G5) DC(F11):DG(G4) DG(F12):DC(G3) chainB ( 26) HIS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 (104) GLN109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 6 0 0 0 0 0 (105) ASN110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (131) SER136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (133) GLN138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 34 0 (135) PRO140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (136) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 12 0 0 0 (194) TYR199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (196) ASN201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 (198) ALA203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (199) ALA204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 (200) ALA205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 (202) GLN207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (204) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 prot.sequence sfikpiyqdinsiligqkvkrpksgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >1xhz_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=PHI29 DNA POLYMERASE, ORTHORHOMBIC CRYSTAL FORM, SSDNA COMPLEX organism=Bacillus phage phi29 DNA sequence DT(H1) DT(H2) DT(H3) DT(H4) DT(H5) chainD ( 13) THR17 0 0 0 0 1 ( 58) ASN62 0 0 7 5 0 ( 61) PHE65 0 0 0 10 0 (144) TYR148 0 0 0 0 33 (524) VAL528 1 0 0 0 0 (525) LYS529 1 0 0 0 0 (529) MET533 1 0 0 0 0 (531) ASP535 5 0 0 0 0 (534) LYS538 2 0 0 0 0 (551) LYS555 0 2 0 0 0 (563) LEU567 0 0 0 7 10 prot.sequence prkmyscafettTkvedcrvwaygymniedhseykignsldefmawvlkvqadlyfhNlkFagafiinwlerngfkwsadglpntyntiisrmgqwymidiclgykgkrkihtviydslkklpfpvkkiakdfkltvlkgdidYhkerpvgykitpeeyayikndiqiiaealliqfkqgldrmtagsdslkgfkdiittkkfkkvfptlslgldkevryayrggftwlndrfkekeigegmvfdvnslypaqmysrllpygepivfegkyvwdedyplhiqhircefelkegyiptiqikrsrfykgneylkssggeiadlwlsnvdlelmkehydlynveyisglkfkattglfkdfidkwtyikttsegaikqlaklmlnslygkfasnpdvtgkvpylkengalgfrlgeeetkdpvytpmgvfitawaryttitaaqacydriiycdtdsihltgteipdvikdivdpkklgywahestfkrakylrqktyiqdiymkevdgklvegspddytdikfsVKcagMtDkiKkevtfenfkvgfsrkmKpkpvqvpggvvLvddtftik >1xns_B:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=PEPTIDE TRAPPED HOLLIDAY JUNCTION INTERMEDIATE IN CRE-LOXP RECOMBINATION organism=Enterobacteria phage P1 DNA sequence DA(D2) DT(D3) DA(D4) DA(D5) DC(D6) DT(D7) DT(D8) DC(D9) DG(D10) DT(D11) DA(D12) DT(D13) DA(D14) DG(D15) DC(D16) DA(D17) DT(D18) DA(D19) DC(D20) DA(D21) DT(D22) DT(D23) DA(D24) DT(D25) DA(D26) DC(D27) DG(D28) DA(D29) DA(D30) DG(D31) DT(D32) DT(D33) DA(D34) DT(D35) chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 (225) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 (240) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 14 1 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwkMllsvcrswaawcklnnrkwfpaepedvrdyllylqarglavktiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcrvRKngvaapsatsqlstRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled >1xo0_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=HIGH RESOLUTION STRUCTURE OF THE HOLLIDAY JUNCTION INTERMEDIATE IN CRE-LOXP SITE-SPECIFIC RECOMBINATION organism=Enterobacteria phage P1 DNA sequence DA(D19):DT(C18) DC(D20):DG(C17) DA(D21):DT(C16) DT(D22):DA(C15) DT(D23):DA(C14) DA(D24):DT(C13) DT(D25):DA(C12) DA(D26):DT(C11) DC(D27):DG(C10) DG(D28):DC(C9) DA(D29):DT(C8) DA(D30):DT(C7) DG(D31):DC(C6) DT(D32):DA(C5) DT(D33):DA(C4) DA(D34):DT(C3) DT(D35):DA(C2) chainA chainB ( 21) HIS40 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 7 9 1 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 6 5 2 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 2 6 6 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 1 7 5 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (224) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 (225) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 5 (238) SER257 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 0 17 19 8 1 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdyllylqarglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllkiaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcrvrkngvaapsatsqlstralegifeathrliygakddsgqrylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllkiaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled >1xpx_A:Homeodomain-like; title=STRUCTURAL BASIS OF PROSPERO-DNA INTERACTION; IMPLICATIONS FOR TRANSCRIPTION REGULATION IN DEVELOPING CELLS organism=Drosophila melanogaster DNA sequence DA(D300):DT(C413) DG(D301):DC(C412) DC(D302):DG(C411) DA(D303):DT(C410) DT(D304):DA(C409) DG(D305):DC(C408) DC(D306):DG(C407) DC(D307):DG(C406) DT(D308):DA(C405) DG(D309):DC(C404) chainA ( 46) LYS1290 0 0 0 0 0 0 5 12 6 0 ( 50) ASN1294 0 0 0 0 0 0 0 0 10 10 ( 53) GLU1297 0 0 0 0 0 0 2 3 1 0 prot.sequence sstltpmhlrkaklmffwvrypssavlkmyfpdikfnknntaqlvKwfsNfrEfyyiqmekyarqavteselyrvlnlhynrnnhievpqnfrfvvestlreffraiqggkdteqswkksiykiisrmddpvpeyfkspnfleq >1xs9_A:Homeodomain-like; title=A MODEL OF THE TERNARY COMPLEX FORMED BETWEEN MARA, THE ALPHA-CTD OF RNA POLYMERASE AND DNA organism=ESCHERICHIA COLI DNA sequence DG(B404):DC(C447) DA(B405):DT(C446) DT(B406):DA(C445) DT(B407):DA(C444) DT(B408):DA(C443) DA(B409):DT(C442) DG(B410):DC(C441) DC(B411):DG(C440) DA(B412):DT(C439) DA(B413):DT(C438) DA(B414):DT(C437) DA(B415):DT(C436) DC(B416):DG(C435) DG(B417):DC(C434) DT(B418):DA(C433) DG(B419):DC(C432) DG(B420):DC(C431) DC(B421):DG(C430) DA(B422):DT(C429) DT(B423):DA(C428) chainA ( 42) TRP42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 3 0 0 0 ( 43) HIS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 ( 45) GLN45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 46) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 1 0 0 ( 91) GLN91 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) GLN92 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) THR95 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG96 0 0 0 0 0 0 4 10 17 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mtmsrrntdaitihsildwiednlesplslekvsersgyskWHlQRmfkketghslgqyirsrkmteiaqklkesnepilylaerygfesQQtlTRtfknyfdvpphkyrmtnmqgesrflhplnhyns >1xsd_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE BLAI REPRESSOR IN COMPLEX WITH DNA organism=Staphylococcus aureus DNA sequence DT(B201) DA(B202) DC(B203) DT(B204) DA(B205) DC(B206) DA(B207) DT(B208) DA(B209) DT(B210) DG(B211) DT(B212) DA(B213) DG(B214) DT(B215) DA(B216) chainA ( 42) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 2 5 3 1 ( 43) THR44 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 ( 46) THR47 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 ( 50) ARG51 0 0 0 0 0 0 0 0 0 8 12 4 0 0 0 0 prot.sequence tnkqveismaewdvmniiwdkksvsaneivveiqkykevsdKTirTlitRlykkeiikrykseniyfyssnikeddikmktaktflnklyggdmkslvlnfakneelnnkeieelrdilndiskk >1xsl_EI:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;DNA_polymerase_beta-like,_second_domain;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE LAMBDA IN COMPLEX WITH A ONE NUCLEOTIDE DNA GAP organism=Homo sapiens DNA sequence DG(H1):DC(F4) DC(H2):DG(F3) DC(H3):DG(F2) DG(H4):DC(F1) DC(J1):DG(L4) DG(J2):DC(L3) DG(J3):DC(L2) DC(J4):DG(L1) chainE ( 24) TRP274 41 0 0 0 0 0 0 0 ( 25) ARG275 8 0 0 0 0 0 0 0 ( 27) LEU277 3 0 0 0 0 0 0 0 chainI ( 25) TRP274 0 0 0 0 0 0 0 40 ( 26) ARG275 0 0 0 0 0 0 0 10 ( 28) LEU277 0 0 0 0 0 0 0 2 prot.sequence nhnlhiteklevlakaysvqgdkWRaLgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw/tnhnlhiteklevlakaysvqgdkWRaLgyaKainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >1xsl_I:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE LAMBDA IN COMPLEX WITH A ONE NUCLEOTIDE DNA GAP organism=Homo sapiens DNA sequence DG(H1):DC(F4) DC(H2):DG(F3) DC(H3):DG(F2) DG(H4):DC(F1) DC(J1):DG(L4) DG(J2):DC(L3) DG(J3):DC(L2) DC(J4):DG(L1) chainI ( 25) TRP274 0 0 0 0 0 0 0 40 ( 26) ARG275 0 0 0 0 0 0 0 10 ( 28) LEU277 0 0 0 0 0 0 0 2 prot.sequence tnhnlhiteklevlakaysvqgdkWRaLgyaKainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >1xsp_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE LAMBDA IN COMPLEX WITH NICKED DNA AND PYROPHOSPHATE organism=Homo sapiens DNA sequence DC(T5):DG(P7) DG(T6):DC(P6) DT(T7):DA(P5) DA(T8):DT(P4) DC(T9):DG(P3) DT(T10):DA(P2) DG(T11):DC(P1) chainA (224) LYS472 0 0 0 1 0 0 0 (257) TYR505 10 9 0 0 0 0 0 (262) ALA510 6 0 0 0 0 0 0 (265) ASN513 10 0 0 0 0 0 0 (266) ARG514 31 0 0 0 0 0 0 (269) ARG517 12 7 0 0 0 0 0 (281) GLU529 0 9 1 0 0 0 0 prot.sequence atnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgakvgpgrvlptptekdvfrllglpyrepaerdw >1xyi_A:Chromo_domain-like; title=HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D DOUBLE MUTANT VAL26ALA/MET29ALA IN COMPLEX WITH DNA GCGATCGC organism=SULFOLOBUS ACIDOCALDARIUS DNA sequence DG(B101):DC(C116) DC(B102):DG(C115) DG(B103):DC(C114) DA(B104):DT(C113) DT(B105):DA(C112) DC(B106):DG(C111) DG(B107):DC(C110) DC(B108):DG(C109) chainA ( 24) TRP24 0 0 0 8 0 0 0 0 ( 26) ALA26 0 0 4 4 0 0 0 0 ( 29) ALA29 0 0 2 0 0 0 0 0 ( 42) ARG42 0 0 0 10 10 3 0 0 prot.sequence mvkvkfkykgeekevdtskikkvWrAgkAvSftyddngktgRgavsekdapkelldmlaraerekk >1y1w_AB: title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N1):DT(T16) DA(N2):DT(T15) DG(N3):DC(T14) DT(N4):DA(T13) DA(N5):DT(T12) DC(N6):DG(T11) DT(N7):DA(T10) chainA (1347) ARG1386 2 8 0 0 0 0 0 chainB (421) ASP505 8 0 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrDgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >1y1w_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N1):DT(T16) DA(N2):DT(T15) DG(N3):DC(T14) DT(N4):DA(T13) DA(N5):DT(T12) DC(N6):DG(T11) DT(N7):DA(T10) chainB (421) ASP505 8 0 0 0 0 0 0 prot.sequence desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrDgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >1y6f_AB:UDP-Glycosyltransferase/glycogen_phosphorylase; title=ALPHA-GLUCOSYLTRANSFERASE IN COMPLEX WITH UDP-GLUCOSE AND DNA CONTAINING AN ABASIC SITE organism=Enterobacteria phage T4 DNA sequence DG(C1):DC(D13) DA(C2):DT(D12) DT(C3):DA(D11) DA(C4):DT(D10) DC(C5):DG(D9) DT(C6):DA(D8) DA(C8):DG(D7) DG(C9):DT(D6) DA(C10):DC(D5) DT(C11):DT(D4) DA(C12):DA(D3) DG(C13):DT(D2) chainA (122) LEU1119 0 0 0 3 3 0 0 0 0 0 0 0 (126) ARG1123 0 0 0 0 0 1 0 0 0 0 0 0 (200) THR1206 0 0 0 0 0 1 0 0 0 0 0 0 (201) THR1207 0 0 0 0 3 2 0 0 0 0 0 0 (230) ARG1236 0 0 0 0 0 0 13 8 1 0 0 0 (232) PRO1238 0 0 0 0 0 12 2 0 0 0 0 0 (233) ALA1239 0 0 0 0 0 5 0 0 0 0 0 0 (234) PHE1240 0 0 0 0 0 0 3 0 0 0 0 0 (235) ILE1241 0 0 0 0 0 11 3 0 0 0 0 0 (238) LYS1244 0 0 0 0 0 0 4 0 0 0 0 0 chainB (121) LEU1119 0 0 0 0 0 0 0 0 0 3 2 0 (201) THR1207 0 0 0 0 0 0 0 0 0 0 2 0 (232) PRO1238 0 0 0 0 0 0 0 0 0 0 0 3 (233) ALA1239 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mgsmricifmarglegcgvtkfsleqrdwfiknghevtlvyakdksftrtsshdhksfsipvilakeydkalklvndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvLslrRnlgleetvrradvifshsdngdfnkvlmkewypeeaptvynfqppmdivkvrstywkdvseinmninrwigrtTTwkgfyqmfdfhekflkpagkstvmegleRsPAFIaiKekgipyeyygnreidkmnlapnqpaqilDcyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferikelssdralydrerekayeflyqhqdssfcfkeqfdiitk/gsmricifmarglegcgvtkfsleqrdwfiknghevtlvyakdksftrtsshdhksfsipvilakeydkalklvndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvLslrrnlgleetvrradvifshsdngdfnkvlmkewypeteaptvynfqppmdivkvrstywkdvseinmninrwigrttTwkgfyqmfdfhekflkpagkstvmeglersPAfiaikekgipyeyygnreidkmnlapnqpaqildcyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferikelssdralydrerekayeflyqhqdssfcfkeqfdiitk >1y6f_B:UDP-Glycosyltransferase/glycogen_phosphorylase; title=ALPHA-GLUCOSYLTRANSFERASE IN COMPLEX WITH UDP-GLUCOSE AND DNA CONTAINING AN ABASIC SITE organism=Enterobacteria phage T4 DNA sequence DC(D1):DG(C13) DT(D2):DA(C12) DA(D3):DT(C11) DT(D4):DA(C10) DC(D5):DG(C9) DT(D6):DA(C8) DG(D7):DT(C6) DA(D8):DC(C5) DG(D9):DA(C4) DT(D10):DT(C3) DA(D11):DA(C2) DT(D12):DG(C1) chainB (121) LEU1119 0 1 2 2 0 0 0 0 0 0 0 0 (201) THR1207 0 2 0 0 0 0 0 0 0 0 0 0 (232) PRO1238 16 0 0 0 0 0 0 0 0 0 0 0 (233) ALA1239 1 0 0 0 0 0 0 0 0 0 0 0 (235) ILE1241 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gsmricifmarglegcgvtkfsleqrdwfiknghevtlvyakdksftrtsshdhksfsipvilakeydkalklvndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvLslrrnlgleetvrradvifshsdngdfnkvlmkewypeteaptvynfqppmdivkvrstywkdvseinmninrwigrttTwkgfyqmfdfhekflkpagkstvmeglersPAfIaikekgipyeyygnreidkmnlapnqpaqildcyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferikelssdralydrerekayeflyqhqdssfcfkeqfdiitk >1y6g_AB:UDP-Glycosyltransferase/glycogen_phosphorylase; title=ALPHA-GLUCOSYLTRANSFERASE IN COMPLEX WITH UDP AND A 13_MER DNA CONTAINING A HMU BASE AT 2.8 A RESOLUTION organism=Enterobacteria phage T4 DNA sequence DC(D1):DG(C13) DT(D2):DA(C12) DA(D3):DT(C11) DT(D4):DA(C10) DC(D5):DG(C9) DT(D6):DA(C8) DG(D7):DT(C6) DA(D8):DC(C5) DG(D9):DA(C4) DT(D10):DT(C3) DA(D11):DA(C2) DT(D12):DG(C1) chainA (198) THR1206 0 0 0 0 0 0 1 0 0 0 0 0 (199) THR1207 0 0 0 0 0 0 1 6 0 0 0 0 (228) ARG1236 0 0 0 0 0 7 6 0 0 0 0 0 (230) PRO1238 0 0 0 0 0 0 2 3 0 0 0 0 (231) ALA1239 0 0 0 0 0 0 6 0 0 0 0 0 (232) PHE1240 0 0 0 0 0 0 2 0 0 0 0 0 (233) ILE1241 0 0 0 0 0 0 11 9 0 0 0 0 (234) ALA1242 0 0 0 0 0 0 0 1 0 0 0 0 (236) LYS1244 0 0 0 0 0 1 17 0 0 0 0 0 (237) GLU1245 0 0 0 0 0 0 0 2 0 0 0 0 chainB (122) LEU1119 0 0 3 3 0 0 0 0 0 0 0 0 (200) THR1207 0 0 3 0 0 0 0 0 0 0 0 0 (231) PRO1238 19 0 0 0 0 0 0 0 0 0 0 0 (232) ALA1239 3 0 0 0 0 0 0 0 0 0 0 0 (234) ILE1241 3 0 0 0 0 0 0 0 0 0 0 0 (235) ALA1242 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mgsmricifmarglegcgvtkfsleqrdwfiknghevtlvyakdksftrtsshdhksfsipvilakeydkalklvndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvlslrrnlgleetvrradvifshsdngdfnkvlmkewypaptvynfqppmdivkvrstywkdvseinmninrwigrtTTwkgfyqmfdfhekflkpagkstvmegleRsPAFIAiKEkgipyeyygnreidkmnlapnqpaqildcyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferikelssdralydrerekayeflyqhqdssfcfkeqfdiitk/mgsmricifmarglegcgvtkfsleqrdwfiknghevtlvyakdksftrtsshdhksfsipvilakeydkalklvndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvLslrrnlgleetvrradvifshsdngdfnkvlmkewypeaptvynfqppmdivkvrstywkdvseinmninrwigrttTwkgfyqmfdfhekflkpagkstvmeglersPAfIAikekgipyeyygnreidkmnlapnqpaqildcyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferikelssdralydrerekayeflyqhqdssfcfkeqfdiitk >1y6g_B:UDP-Glycosyltransferase/glycogen_phosphorylase; title=ALPHA-GLUCOSYLTRANSFERASE IN COMPLEX WITH UDP AND A 13_MER DNA CONTAINING A HMU BASE AT 2.8 A RESOLUTION organism=Enterobacteria phage T4 DNA sequence DA(C2):DT(D12) DT(C3):DA(D11) DA(C4):DT(D10) DC(C5):DG(D9) DT(C6):DA(D8) DA(C8):DG(D7) DG(C9):DT(D6) DA(C10):DC(D5) DT(C11):DT(D4) DA(C12):DA(D3) DG(C13):DT(D2) chainB (122) LEU1119 0 0 0 0 0 0 0 2 4 0 0 (200) THR1207 0 0 0 0 0 0 0 0 3 0 0 (231) PRO1238 0 0 0 0 0 0 0 0 0 0 9 (232) ALA1239 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mgsmricifmarglegcgvtkfsleqrdwfiknghevtlvyakdksftrtsshdhksfsipvilakeydkalklvndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvLslrrnlgleetvrradvifshsdngdfnkvlmkewypeaptvynfqppmdivkvrstywkdvseinmninrwigrttTwkgfyqmfdfhekflkpagkstvmeglersPAfiaikekgipyeyygnreidkmnlapnqpaqildcyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferikelssdralydrerekayeflyqhqdssfcfkeqfdiitk >1y77_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX WITH SUBSTRATE ANALOGUE GMPCPP organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N1):DT(T16) DA(N2):DT(T15) DG(N3):DC(T14) DT(N4):DA(T13) DA(N5):DT(T12) DC(N6):DG(T11) DT(N7):DA(T10) chainA (1347) ARG1386 4 12 0 0 0 0 0 (1348) HIS1387 0 0 1 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRHgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >1y77_AB: title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX WITH SUBSTRATE ANALOGUE GMPCPP organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N1):DT(T16) DA(N2):DT(T15) DG(N3):DC(T14) DT(N4):DA(T13) DA(N5):DT(T12) DC(N6):DG(T11) DT(N7):DA(T10) chainA (1347) ARG1386 4 12 0 0 0 0 0 (1348) HIS1387 0 0 1 0 0 0 0 chainB (421) ASP505 6 0 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRHgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrDgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >1y8z_A:UDP-Glycosyltransferase/glycogen_phosphorylase; title=ALPHA-GLUCOSYLTRANSFERASE IN COMPLEX WITH UDP AND A 13-MER DNA CONTAINING A HMU BASE AT 1.9 A RESOLUTION organism=Enterobacteria phage T4 DNA sequence DC(D1):DG(C13) DT(D2):DA(C12) DA(D3):DT(C11) DT(D4):DA(C10) DC(D5):DG(C9) DT(D6):DA(C8) DG(D7):DT(C6) DA(D8):DC(C5) DG(D9):DA(C4) chainA ( 46) THR1045 0 0 0 2 0 0 0 0 0 (120) LEU1119 0 0 0 0 0 0 0 1 0 (196) THR1206 0 0 0 0 0 0 4 0 0 (197) THR1207 0 0 0 0 0 0 3 7 0 (226) ARG1236 0 0 0 0 1 6 6 0 0 (228) PRO1238 0 0 0 0 0 6 2 6 0 (229) ALA1239 0 0 0 0 0 0 7 0 0 (230) PHE1240 0 0 0 0 0 0 3 0 0 (231) ILE1241 0 0 0 0 0 0 9 11 0 (232) ALA1242 0 0 0 0 0 0 0 1 0 (234) LYS1244 0 0 0 0 0 0 11 0 0 prot.sequence gsmricifmargleggvtkfsleqrdwfiknghevtlvyakdksfTrtsshdhksfsipvilakeydkalklvndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvLslrrnlgleetvrradvifshsdngdfnkvlmkewypaptvynfqppmdivkvrstywkdvseinmninrwigrtTTwkgfyqmfdfhekflkpagkstvmegleRsPAFIAiKekgipyeyygnreidkmnlapnqpaqildyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferikelssdralydrerekayeflyqhqdssfcfkeqfdiitk >1y8z_AB:UDP-Glycosyltransferase/glycogen_phosphorylase; title=ALPHA-GLUCOSYLTRANSFERASE IN COMPLEX WITH UDP AND A 13-MER DNA CONTAINING A HMU BASE AT 1.9 A RESOLUTION organism=Enterobacteria phage T4 DNA sequence DC(D1):DG(C13) DT(D2):DA(C12) DA(D3):DT(C11) DT(D4):DA(C10) DC(D5):DG(C9) DT(D6):DA(C8) DG(D7):DT(C6) DA(D8):DC(C5) DG(D9):DA(C4) chainA ( 46) THR1045 0 0 0 2 0 0 0 0 0 (120) LEU1119 0 0 0 0 0 0 0 1 0 (196) THR1206 0 0 0 0 0 0 4 0 0 (197) THR1207 0 0 0 0 0 0 3 7 0 (226) ARG1236 0 0 0 0 1 6 6 0 0 (228) PRO1238 0 0 0 0 0 6 2 6 0 (229) ALA1239 0 0 0 0 0 0 7 0 0 (230) PHE1240 0 0 0 0 0 0 3 0 0 (231) ILE1241 0 0 0 0 0 0 9 11 0 (232) ALA1242 0 0 0 0 0 0 0 1 0 (234) LYS1244 0 0 0 0 0 0 11 0 0 chainB (120) LEU1119 0 0 3 3 0 0 0 0 0 (179) THR1207 0 0 1 0 0 0 0 0 0 (209) SER1237 1 0 0 0 0 0 0 0 0 (210) PRO1238 15 0 0 0 0 0 0 0 0 (211) ALA1239 4 0 0 0 0 0 0 0 0 (214) ALA1242 2 0 0 0 0 0 0 0 0 prot.sequence gsmricifmargleggvtkfsleqrdwfiknghevtlvyakdksfTrtsshdhksfsipvilakeydkalklvndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvLslrrnlgleetvrradvifshsdngdfnkvlmkewypaptvynfqppmdivkvrstywkdvseinmninrwigrtTTwkgfyqmfdfhekflkpagkstvmegleRsPAFIAiKekgipyeyygnreidkmnlapnqpaqildyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferikelssdralydrerekayeflyqhqdssfcfkeqfdiitk/gsmricifmargleggvtkfsleqrdwfiknghevtlvyakdksftrtsshdhksfsipvilakeydkalklvndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvLslrrnlgleetvrradvifshsvynfqppmdivkvrstywkdvseinmninrwigrttTwkgfyqmfdfhekflkpagkstvmeglerSPAfiAikekgipyeyygnreidkmnlapnqpaqildyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferikelssdralydrerekayeflyqhqdssfcfkeqfdiitk >1ya6_A:UDP-Glycosyltransferase/glycogen_phosphorylase; title=ALPHA-GLUCOSYLTRANSFERASE IN COMPLEX WITH UDP AND A 13-MER DNA CONTAINING A CENTRAL A:G MISMATCH organism=Enterobacteria phage T4 DNA sequence DC(D1):DG(C13) DT(D2):DA(C12) DA(D3):DT(C11) DT(D4):DA(C10) DC(D5):DG(C9) DT(D6):DA(C8) DG(D7):DA(C7) DA(D8):DT(C6) DG(D9):DC(C5) DT(D10):DA(C4) DA(D11):DT(C3) DT(D12):DA(C2) chainA ( 46) THR1045 0 0 0 0 0 0 11 0 0 0 0 0 (186) THR1206 0 0 0 0 0 0 0 3 0 0 0 0 (187) THR1207 0 0 0 0 0 0 0 2 4 0 0 0 (215) GLU1235 0 0 0 0 0 0 10 0 0 0 0 0 (216) ARG1236 0 0 0 0 2 5 5 0 0 0 0 0 (217) SER1237 0 0 0 0 0 0 5 0 0 0 0 0 (218) PRO1238 0 0 0 0 0 9 3 6 0 0 0 0 (219) ALA1239 0 0 0 0 0 0 0 6 0 0 0 0 (220) PHE1240 0 0 0 0 0 0 1 0 0 0 0 0 (221) ILE1241 0 0 0 0 0 0 13 11 0 0 0 0 (222) ALA1242 0 0 0 0 0 0 0 1 0 0 0 0 (224) LYS1244 0 0 0 0 0 0 10 0 0 0 0 0 (254) CYS1274 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence smricifmarglegcgvtkfsleqrdwfiknghevtlvyakdksfTrtsshdhksfsipvilakeydkalklvndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvlslrrnlgleetvrradvifshsdngdfnptvynfqppmdivkvrstywkdvseinmninrwigrtTTwkgfyqmfdfhekflkpagkstvmeglERSPAFIAiKekgipyeyygnreidkmnlapnqpaqildCyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferikelssdralydrerekayeflyqhqdssfcfkeqfdiitk >1ya6_AB:UDP-Glycosyltransferase/glycogen_phosphorylase; title=ALPHA-GLUCOSYLTRANSFERASE IN COMPLEX WITH UDP AND A 13-MER DNA CONTAINING A CENTRAL A:G MISMATCH organism=Enterobacteria phage T4 DNA sequence DC(D1):DG(C13) DT(D2):DA(C12) DA(D3):DT(C11) DT(D4):DA(C10) DC(D5):DG(C9) DT(D6):DA(C8) DG(D7):DA(C7) DA(D8):DT(C6) DG(D9):DC(C5) DT(D10):DA(C4) DA(D11):DT(C3) DT(D12):DA(C2) chainA ( 46) THR1045 0 0 0 0 0 0 11 0 0 0 0 0 (186) THR1206 0 0 0 0 0 0 0 3 0 0 0 0 (187) THR1207 0 0 0 0 0 0 0 2 4 0 0 0 (215) GLU1235 0 0 0 0 0 0 10 0 0 0 0 0 (216) ARG1236 0 0 0 0 2 5 5 0 0 0 0 0 (217) SER1237 0 0 0 0 0 0 5 0 0 0 0 0 (218) PRO1238 0 0 0 0 0 9 3 6 0 0 0 0 (219) ALA1239 0 0 0 0 0 0 0 6 0 0 0 0 (220) PHE1240 0 0 0 0 0 0 1 0 0 0 0 0 (221) ILE1241 0 0 0 0 0 0 13 11 0 0 0 0 (222) ALA1242 0 0 0 0 0 0 0 1 0 0 0 0 (224) LYS1244 0 0 0 0 0 0 10 0 0 0 0 0 (254) CYS1274 0 0 0 0 0 0 1 0 0 0 0 0 chainB (122) LEU1119 0 0 3 4 0 0 0 0 0 0 0 0 (184) THR1207 0 0 1 0 0 0 0 0 0 0 0 0 (214) SER1237 2 0 0 0 0 0 0 0 0 0 0 0 (215) PRO1238 16 0 0 0 0 0 0 0 0 0 0 0 (216) ALA1239 5 0 0 0 0 0 0 0 0 0 0 0 (219) ALA1242 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smricifmarglegcgvtkfsleqrdwfiknghevtlvyakdksfTrtsshdhksfsipvilakeydkalklvndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvlslrrnlgleetvrradvifshsdngdfnptvynfqppmdivkvrstywkdvseinmninrwigrtTTwkgfyqmfdfhekflkpagkstvmeglERSPAFIAiKekgipyeyygnreidkmnlapnqpaqildCyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferikelssdralydrerekayeflyqhqdssfcfkeqfdiitk/mgsmricifmarglegcgvtkfsleqrdwfiknghevtlvyakdksftrtsshdhksfsipvilakeydkalklvndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvLslrrnlgleetvrradvifshsdptvynfqppmdivkvrstywkdvseinmninrwigrttTwkgfyqmfdfhekflkpagkstvmeglerSPAfiAikekgipyeyygnreidkmnlapnqpaqildcyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferikelssdralydrerekayeflyqhqdssfcfkeqfdiitk >1yfh_A:Methylated_DNA-protein_cysteine_methyltransferase_domain;Methylated_DNA-protein_cysteine_methyltransferase,_C-terminal_domain; title=WT HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE BOUND TO DNA CONTAINING AN ALKYLATED CYTOSINE organism=Homo sapiens DNA sequence DG(F1):DC(G1) DT(F2):DA(G2) DG(F3):DC(G3) DG(F4):DC(G4) DA(F5):DT(G5) DT(F6):DA(G6) DG(F7):DC(G7) DG(F9):DA(G8) DT(F10):DC(G9) DG(F11):DA(G10) DT(F12):DC(G11) DA(F13):DA(G12) DG(F14):DT(G13) DG(F15):DC(G14) DT(F16):DC(G15) chainA (114) ARG128 0 0 0 0 0 0 46 46 2 0 0 0 0 0 0 (115) ALA129 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence cemkrttldsplgklelsgceqglheikllgvpapaavlggpeplmqctawlnayfhqpeaieefpvpalhhpvfqqesftrqvlwkllkvvkfgevisyqqlaalagnpkaaRAvggamrgnpvpilipchrvvcssgavgnysgglavkewllaheghrlgkp >1yfh_AB:Methylated_DNA-protein_cysteine_methyltransferase_domain;Methylated_DNA-protein_cysteine_methyltransferase,_C-terminal_domain; title=WT HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE BOUND TO DNA CONTAINING AN ALKYLATED CYTOSINE organism=Homo sapiens DNA sequence DC(G15):DG(F15) DC(G14):DG(F14) DT(G13):DA(F13) DA(G12):DT(F12) DC(G11):DG(F11) DA(G10):DT(F10) DC(G9):DG(F9) DA(G8):DG(F7) DC(G7):DT(F6) DA(G6):DA(F5) DT(G5):DG(F4) DC(G4):DG(F3) DC(G3):DT(F2) DA(G2):DG(F1) chainA (114) ARG128 0 0 0 0 0 0 36 57 1 0 0 0 0 0 (115) ALA129 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB (114) ARG128 41 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ALA129 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence cemkrttldsplgklelsgceqglheikllgvpapaavlggpeplmqctawlnayfhqpeaieefpvpalhhpvfqqesftrqvlwkllkvvkfgevisyqqlaalagnpkaaRAvggamrgnpvpilipchrvvcssgavgnysgglavkewllaheghrlgkp/cemkrttldsplgklelsgceqglheikllgvpapaavlggpeplmqctawlnayfhqpeaieefpvpalhhpvfqqesftrqvlwkllkvvkfgevisyqqlaalagnpkaaRAvggamrgnpvpilipchrvvcssgavgnysgglavkewllaheghr >1yfi_AB: title=CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE MSPI IN COMPLEX WITH ITS COGNATE DNA IN P212121 SPACE GROUP organism=MORAXELLA SP. DNA sequence DC(C1):DG(D20) DC(C2):DG(D19) DC(C3):DG(D18) DC(C4):DG(D17) DC(C5):DG(D16) DG(C6):DC(D15) DG(C7):DC(D14) DG(C8):DC(D13) DG(C9):DC(D12) DC(F11):DG(E10) DC(F12):DG(E9) DC(F13):DG(E8) DC(F14):DG(E7) DC(F15):DG(E6) DG(F16):DC(E5) DG(F17):DC(E4) DG(F18):DC(E3) DG(F19):DC(E2) DG(F20):DC(E1) chainA (123) LYS123 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (127) SER127 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) GLU130 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ASN246 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (248) THR248 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 (249) TYR249 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 (251) SER251 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) SER253 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) GLN259 0 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 (261) LYS261 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 chainB (123) LYS123 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (127) SER127 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 (130) GLU130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 (237) ARG237 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 (246) ASN246 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (248) THR248 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 (249) TYR249 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 (251) SER251 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 (253) SER253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (259) GLN259 0 0 0 0 0 0 0 0 0 0 0 0 1 10 1 0 0 0 0 (261) LYS261 0 0 0 0 0 0 0 0 0 0 0 1 10 6 0 0 0 0 0 prot.sequence mrtellsklyddfgidqlphtqhgvtSdrlgklyekyildifkdieslkkyntnafpqekdisskllkalnldldniidvsssdtdlgrtiaggspktdatirftfhnqssrlvplnikhssKkkvSiaEydvetictgvgisdgelkelirkhqndqsaklftpvqkqrltellepyrerfirwcvtlraeksegnilhpdllirfqvidreyvdvtikniddyvsdriaegskarkpgfgtglNwTYaSgSkakkmQfKg/mrtellsklyddfgidqlphtqhgvtsdrlgklyekyildifkdieslkkyntnafpqekdisskllkalnldldniidvsssdtdlgrtiaggspktdatirftfhnqssrlvplnikhssKkkvSiaEydvetictgvgisdgelkelirkhqndqsaklftpvqkqrltellepyrerfirwcvtlraeksegnilhpdllirfqvidreyvdvtikniddyvsdriaegskaRkpgfgtglNwTYaSgSkakkmQfKg >1yfi_B:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE MSPI IN COMPLEX WITH ITS COGNATE DNA IN P212121 SPACE GROUP organism=MORAXELLA SP. DNA sequence DC(C1):DG(D20) DC(C2):DG(D19) DC(C3):DG(D18) DC(C4):DG(D17) DC(C5):DG(D16) DG(C6):DC(D15) DG(C7):DC(D14) DG(C8):DC(D13) DG(C9):DC(D12) DC(F11):DG(E10) DC(F12):DG(E9) DC(F13):DG(E8) DC(F14):DG(E7) DC(F15):DG(E6) DG(F16):DC(E5) DG(F17):DC(E4) DG(F18):DC(E3) DG(F19):DC(E2) DG(F20):DC(E1) chainB (123) LYS123 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (127) SER127 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 (130) GLU130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 (237) ARG237 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 (246) ASN246 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (248) THR248 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 (249) TYR249 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 (251) SER251 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 (253) SER253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (259) GLN259 0 0 0 0 0 0 0 0 0 0 0 0 1 10 1 0 0 0 0 (261) LYS261 0 0 0 0 0 0 0 0 0 0 0 1 10 6 0 0 0 0 0 prot.sequence mrtellsklyddfgidqlphtqhgvtsdrlgklyekyildifkdieslkkyntnafpqekdisskllkalnldldniidvsssdtdlgrtiaggspktdatirftfhnqssrlvplnikhssKkkvSiaEydvetictgvgisdgelkelirkhqndqsaklftpvqkqrltellepyrerfirwcvtlraeksegnilhpdllirfqvidreyvdvtikniddyvsdriaegskaRkpgfgtglNwTYaSgSkakkmQfKg >1yfj_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=T4DAM IN COMPLEX WITH ADOHCY AND 15-MER OLIGONUCLEOTIDE SHOWING SEMI- SPECIFIC AND SPECIFIC CONTACT organism=? DNA sequence DC(8802):DG(7715) DA(8803):DT(7714) DC(8804):DG(7713) DA(8805):DT(7712) DG(8806):DC(7711) DG(8807):DC(7710) DA(8808):DT(7709) DT(8809):DA(7708) DC(8810):DG(7707) DC(8811):DG(7706) DT(8812):DA(7705) DG(8813):DC(7704) DT(8814):DA(7703) DG(8815):DC(7702) chainB (112) SER112 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (113) ASN113 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (130) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 7 13 prot.sequence mlgaiaytgnkqsllpelkshfpkynrfvdlfcgglsvslnvngpvlandiqepiiemykrlinvswddvlkvikqyklsktskeeflklredynktrdplllyvlhfhgfSNmirindkgnfttpfgkRtinknsekrfnhfkqncdkiifsslhfkdvkildgdfvyvdppylitvadynkfwsedeekdllnlldslndrgikfglsnvlehhgkentllkewskkynvkhlnkkyvfniyhskekngtdevyifn >1yfj_EF: title=T4DAM IN COMPLEX WITH ADOHCY AND 15-MER OLIGONUCLEOTIDE SHOWING SEMI- SPECIFIC AND SPECIFIC CONTACT organism=ENTEROBACTERIA PHAGE T4 DNA sequence DC(9902):DG(01015) DA(9903):DT(01014) DC(9904):DG(01013) DA(9905):DT(01012) DG(9906):DC(01011) DG(9907):DC(01010) DA(9908):DT(01009) DT(9909):DA(01008) DC(9910):DG(01007) DC(9911):DG(01006) DT(9912):DA(01005) DG(9913):DC(01004) DT(9914):DA(01003) DG(9915):DC(01002) chainE (112) SER112 16 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ASN113 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ARG130 13 6 0 0 0 0 0 0 0 0 0 0 0 0 chainF (111) PHE111 0 0 0 0 0 0 78 38 0 0 0 0 0 0 (112) SER112 0 0 0 0 0 0 0 7 11 0 0 0 0 0 (113) ASN113 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (114) MET114 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (116) ARG116 0 0 0 0 14 12 4 0 0 0 0 0 0 0 (126) PRO126 0 0 0 0 0 5 12 0 0 0 0 0 0 0 (129) LYS129 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (130) ARG130 0 0 0 0 0 0 0 8 8 2 0 0 0 0 (171) ASP171 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (174) TYR174 0 0 0 0 0 0 0 17 0 0 0 0 0 0 (177) THR177 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (178) VAL178 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (179) ALA179 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (180) ASP180 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (181) TYR181 0 0 0 0 0 0 0 11 0 0 0 0 0 0 prot.sequence mlgaiaytgnkqsllpelkshfpkynrfvdlfcgglsvslnvngpvlandiqepiiemykrlinvswddvlkvikqyklsktskeeflklredynktrdplllyvlhfhgfSNmirindkgnfttpfgkRtinknsekrfnhfkqncdkiifsslhfkdvkildgdfvyvdppylitvadynkfwsedeekdllnlldslndrgikfglsnvlehhgkentllkewskkynvkhltdevyifn/mlgaiaytgnkqsllpelkshfpkynrfvdlfcgglsvslnvngpvlandiqepiiemykrlinvswddvlkvikqyklsktskeeflklredynktrdplllyvlhfhgFSNMiRindkgnfttPfgKRtinknsekrfnhfkqncdkiifsslhfkdvkildgdfvyvDppYliTVADYnkfwsedeekdllnlldslndrgikfglsnvlehhgkentllkewskkynvkhltdevyifn >1yfl_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=T4DAM IN COMPLEX WITH SINEFUNGIN AND 16-MER OLIGONUCLEOTIDE SHOWING SEMI-SPECIFIC AND SPECIFIC CONTACT AND FLIPPED BASE organism=Enterobacteria phage T4 DNA sequence DT(F501):DA(G616) DC(F502):DG(G615) DA(F503):DT(G614) DC(F504):DG(G613) DA(F505):DT(G612) DG(F506):DC(G611) DG(F507):DC(G610) DA(F508):DT(G609) DT(F509):DA(G608) DC(F510):DG(G607) DC(F511):DG(G606) DT(F512):DA(G605) DG(F513):DC(G604) DT(F514):DA(G603) DG(F515):DC(G602) DA(F516):DT(G601) chainA ( 11) LYS11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) PHE111 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) SER112 8 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ASN113 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) LYS129 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ARG130 10 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ASP171 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) PRO173 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) TYR174 45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) THR177 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ALA179 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TYR181 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) ASN182 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 11) LYS11 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 0 0 41 39 0 0 0 0 0 0 0 (112) SER112 0 0 0 0 0 0 0 0 8 14 0 0 0 0 0 0 (113) ASN113 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (114) MET114 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (116) ARG116 0 0 0 0 0 8 9 2 0 0 0 0 0 0 0 0 (126) PRO126 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 (129) LYS129 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (130) ARG130 0 0 0 0 0 0 0 0 10 11 3 0 0 0 0 0 (171) ASP171 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (173) PRO173 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (174) TYR174 0 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 (177) THR177 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (179) ALA179 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (180) ASP180 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (181) TYR181 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 (182) ASN182 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 prot.sequence mlgaiaytgnKqsllpelkshfpkynrfvdlfcgglsvslnvngpvlandiqepiiemykrlinvswddvlkvikqyklsktskeeflklredynktrdplllyvlhfhgFSNmirindkgnfttpfgKRtinknsekrfnhfkqncdkiifsslhfkdvkildgdfvyvDpPYliTvAdYNkfwsedeekdllnlldslndrgikfglsnvlehhgkentllkewskkynvkhlnngtdevyifn/mlgaiaytgnKqsllpelkshfpkynrfvdlfcgglsvslnvngpvlandiqepiiemykrlinvswddvlkvikqyklsktskeeflklredynktrdplllyvlhfhgFSNMiRindkgnfttPfgKRtinknsekrfnhfkqncdkiifsslhfkdvkildgdfvyvDpPYliTvADYNkfwsedeekdllnlldslndrgikfglsnvlehhgkentllkewskkynvkhlnngtdevyifn >1yfl_D:S-adenosyl-L-methionine-dependent_methyltransferases; title=T4DAM IN COMPLEX WITH SINEFUNGIN AND 16-MER OLIGONUCLEOTIDE SHOWING SEMI-SPECIFIC AND SPECIFIC CONTACT AND FLIPPED BASE organism=Enterobacteria phage T4 DNA sequence DT(I601):DA(H516) DC(I602):DG(H515) DA(I603):DT(H514) DC(I604):DG(H513) DA(I605):DT(H512) DG(I606):DC(H511) DG(I607):DC(H510) DA(I608):DT(H509) DT(I609):DA(H508) DC(I610):DG(H507) DC(I611):DG(H506) DT(I612):DA(H505) DG(I613):DC(H504) DT(I614):DA(H503) DG(I615):DC(H502) DA(I616):DT(H501) chainD ( 8) THR8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 11) LYS11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (111) PHE111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 (112) SER112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 7 (113) ASN113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (129) LYS129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (130) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 9 (171) ASP171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (173) PRO173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (174) TYR174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 (177) THR177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (179) ALA179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (181) TYR181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 (182) ASN182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 prot.sequence mlgaiayTgnKqsllpelkshfpkynrfvdlfcgglsvslnvngpvlandiqepiiemykrlinvswddvlkvikqyklsktskeeflklredynktrdplllyvlhfhgFSNmirindkgnfttpfgKRtinknsekrfnhfkqncdkiifsslhfkdvkildgdfvyvDpPYliTvAdYNkfwsedeekdllnlldslndrgikfglsnvlehhgkentllkewskkynvkhlnkkyngtdevyifn >1yfl_DE:S-adenosyl-L-methionine-dependent_methyltransferases; title=T4DAM IN COMPLEX WITH SINEFUNGIN AND 16-MER OLIGONUCLEOTIDE SHOWING SEMI-SPECIFIC AND SPECIFIC CONTACT AND FLIPPED BASE organism=Enterobacteria phage T4 DNA sequence DT(I601):DA(H516) DC(I602):DG(H515) DA(I603):DT(H514) DC(I604):DG(H513) DA(I605):DT(H512) DG(I606):DC(H511) DG(I607):DC(H510) DA(I608):DT(H509) DT(I609):DA(H508) DC(I610):DG(H507) DC(I611):DG(H506) DT(I612):DA(H505) DG(I613):DC(H504) DT(I614):DA(H503) DG(I615):DC(H502) DA(I616):DT(H501) chainD ( 8) THR8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 11) LYS11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (111) PHE111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 (112) SER112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 7 (113) ASN113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (129) LYS129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (130) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 9 (171) ASP171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (173) PRO173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (174) TYR174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 (177) THR177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (179) ALA179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (181) TYR181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 (182) ASN182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 chainE ( 8) THR8 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 11) LYS11 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 0 0 39 41 0 0 0 0 0 0 0 (112) SER112 0 0 0 0 0 0 14 8 0 0 0 0 0 0 0 0 (113) ASN113 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (114) MET114 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (116) ARG116 0 0 0 0 0 0 0 0 2 14 13 0 0 0 0 0 (126) PRO126 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 (129) LYS129 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (130) ARG130 0 0 0 0 0 2 10 9 0 0 0 0 0 0 0 0 (171) ASP171 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (173) PRO173 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (174) TYR174 0 0 0 0 0 0 0 39 0 0 0 0 0 0 0 0 (177) THR177 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (178) VAL178 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (179) ALA179 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (181) TYR181 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 (182) ASN182 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 prot.sequence mlgaiayTgnKqsllpelkshfpkynrfvdlfcgglsvslnvngpvlandiqepiiemykrlinvswddvlkvikqyklsktskeeflklredynktrdplllyvlhfhgFSNmirindkgnfttpfgKRtinknsekrfnhfkqncdkiifsslhfkdvkildgdfvyvDpPYliTvAdYNkfwsedeekdllnlldslndrgikfglsnvlehhgkentllkewskkynvkhlnkkyngtdevyifn/mlgaiayTgnKqsllpelkshfpkynrfvdlfcgglsvslnvngpvlandiqepiiemykrlinvswddvlkvikqyklsktskeeflklredynktrdplllyvlhfhgFSNMiRindkgnfttPfgKRtinknsekrfnhfkqncdkiifsslhfkdvkildgdfvyvDpPYliTVAdYNkfwsedeekdllnlldslndrgikfglsnvlehhgkentllkewskkynvkhlnkkngtdevyifn >1ynw_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF VITAMIN D RECEPTOR AND 9-CIS RETINOIC ACID RECEPTOR DNA-BINDING DOMAINS BOUND TO A DR3 RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DT(C402):DA(D436) DA(C403):DT(D435) DG(C404):DC(D434) DG(C405):DC(D433) DT(C406):DA(D432) DC(C407):DG(D431) DA(C408):DT(D430) DC(C409):DG(D429) DG(C410):DC(D428) DA(C411):DT(D427) DA(C412):DT(D426) DG(C413):DC(D425) DG(C414):DC(D424) DT(C415):DA(D423) DC(C416):DG(D422) DA(C417):DT(D421) DA(C418):DT(D420) chainA ( 25) GLU42 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS45 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG49 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG50 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 prot.sequence rnvpricgvcgdratgfhfnamtcEgcKgffRRsmkrkalftcaangdcritkdnrracqacrlkrcvdigmmkefiltdeevqrkremilkrkee >1ynw_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF VITAMIN D RECEPTOR AND 9-CIS RETINOIC ACID RECEPTOR DNA-BINDING DOMAINS BOUND TO A DR3 RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DT(C402):DA(D436) DA(C403):DT(D435) DG(C404):DC(D434) DG(C405):DC(D433) DT(C406):DA(D432) DC(C407):DG(D431) DA(C408):DT(D430) DC(C409):DG(D429) DG(C410):DC(D428) DA(C411):DT(D427) DA(C412):DT(D426) DG(C413):DC(D425) DG(C414):DC(D424) DT(C415):DA(D423) DC(C416):DG(D422) DA(C417):DT(D421) DA(C418):DT(D420) chainA ( 25) GLU42 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS45 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG49 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG50 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 chainB ( 20) GLU253 0 0 0 0 0 0 0 0 0 0 0 0 10 5 0 0 0 ( 23) LYS256 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 ( 27) LYS260 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 28) ARG261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 11 0 prot.sequence rnvpricgvcgdratgfhfnamtcEgcKgffRRsmkrkalftcaangdcritkdnrracqacrlkrcvdigmmkefiltdeevqrkremilkrkee/icaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavq >1yo5_C:"Winged_helix"_DNA-binding_domain; title=ANALYSIS OF THE 2.0A CRYSTAL STRUCTURE OF THE PROTEIN-DNA COMPLEX OF HUMAN PDEF ETS DOMAIN BOUND TO THE PROSTATE SPECIFIC ANTIGEN REGULATORY SITE organism=Homo sapiens DNA sequence DT(A1):DA(B13) DA(A2):DT(B12) DG(A3):DC(B11) DC(A4):DG(B10) DA(A5):DT(B9) DG(A6):DC(B8) DG(A7):DC(B7) DA(A8):DT(B6) DT(A9):DA(B5) DG(A10):DC(B4) DT(A11):DA(B3) DG(A12):DC(B2) DT(A13):DA(B1) chainC ( 58) LYS304 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 61) ARG307 0 0 0 0 0 27 17 8 0 0 0 0 0 ( 62) SER308 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 64) ARG310 0 0 0 2 17 12 0 0 0 0 0 0 0 ( 65) GLN311 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 80) ARG326 2 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qpihlwqflkelllkphsygrfirwlnkekgifkiedsaqvarlwgirknrpamnydKlsRSiRQyykkgiirkpdisqRlvyqfvhp >1yqk_A:DNA-glycosylase;TATA-box_binding_protein-like; title=HUMAN 8-OXOGUANINE GLYCOSYLASE CROSSLINKED WITH GUANINE CONTAINING DNA organism=Homo sapiens DNA sequence DG(B2):DC(C29) DT(B3):DA(C28) DA(B4):DT(C27) DG(B5):DC(C26) DA(B6):DT(C25) DC(B7):DG(C24) DC(B8):DG(C23) DT(B9):DA(C22) DG(B10):DC(C21) chainA (137) SER148 0 0 0 0 0 18 0 0 0 (138) CYS149 0 0 0 0 0 10 2 6 0 (140) ASN151 0 0 0 0 0 0 1 0 0 (141) ILE152 0 0 0 0 0 0 4 0 0 (192) TYR203 0 0 0 0 0 48 16 0 0 (193) ARG204 0 0 0 0 0 0 8 0 0 (196) TYR207 0 0 0 0 1 2 0 0 0 (257) ASP268 0 0 0 0 0 0 5 0 0 (259) HIS270 0 0 0 0 0 0 12 0 0 (308) PHE319 0 0 0 0 0 0 6 0 0 prot.sequence sefghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficsSCnNIaritgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvDvHmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwgpyagwaqavlFsadl >1yql_A:DNA-glycosylase;TATA-box_binding_protein-like; title=CATALYTICALLY INACTIVE HOGG1 CROSSLINKED WITH 7-DEAZA-8-AZAGUANINE CONTAINING DNA organism=Homo sapiens DNA sequence DG(B2):DC(C29) DT(B3):DA(C28) DA(B4):DT(C27) DG(B5):DC(C26) DA(B6):DT(C25) DC(B7):DG(C24) DC(B8):PPW(C23) DT(B9):DA(C22) DG(B10):DC(C21) DG(B11):DC(C20) DA(B12):DT(C19) DC(B13):DG(C18) chainA (133) PHE144 0 0 0 0 0 0 2 0 0 0 0 0 (137) SER148 0 0 0 0 0 16 0 0 0 0 0 0 (138) CYS149 0 0 0 0 0 10 1 4 0 0 0 0 (140) ASN151 0 0 0 0 0 0 0 5 1 0 0 0 (143) ARG154 0 0 0 0 0 0 3 20 0 0 0 0 (192) TYR203 0 0 0 0 0 38 16 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 7 0 0 0 0 0 (196) TYR207 0 0 0 0 1 0 0 0 0 0 0 0 (238) GLN249 0 0 0 0 0 0 3 0 0 0 0 0 (246) MET257 0 0 0 0 0 0 3 0 0 0 0 0 (255) PRO266 0 0 0 0 0 0 7 0 0 0 0 0 (257) ASP268 0 0 0 0 0 0 14 0 0 0 0 0 (260) MET271 0 0 0 0 0 0 1 0 0 0 0 0 (282) PRO293 0 1 0 0 0 0 0 0 0 0 0 0 (304) GLN315 0 0 0 0 0 0 8 0 0 0 0 0 (308) PHE319 0 0 0 0 0 0 40 0 0 0 0 0 prot.sequence sefghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficsSCnNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtqvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaqavlfsadlrq >1yqm_A:DNA-glycosylase;TATA-box_binding_protein-like; title=CATALYTICALLY INACTIVE HUMAN 8-OXOGUANINE GLYCOSYLASE CROSSLINKED TO 7-DEAZAGUANINE CONTAINING DNA organism=Homo sapiens DNA sequence DG(C18):DC(B13) DT(C19):DA(B12) DC(C20):DG(B11) DC(C21):DG(B10) DA(C22):DT(B9) 7GU(C23):DC(B8) DG(C24):DC(B7) DT(C25):DA(B6) DC(C26):DG(B5) DT(C27):DA(B4) DA(C28):DT(B3) DC(C29):DG(B2) chainA (133) PHE144 0 0 0 0 0 2 0 0 0 0 0 0 (137) SER148 0 0 0 0 0 0 6 0 0 0 0 0 (138) CYS149 0 0 0 0 8 1 6 0 0 0 0 0 (140) ASN151 0 0 0 1 8 0 0 0 0 0 0 0 (143) ARG154 0 0 0 0 40 3 0 0 0 0 0 0 (192) TYR203 0 0 0 0 0 13 19 0 0 0 0 0 (193) ARG204 0 0 0 0 0 6 0 0 0 0 0 0 (238) GLN249 0 0 0 0 0 3 0 0 0 0 0 0 (246) MET257 0 0 0 0 0 3 0 0 0 0 0 0 (255) PRO266 0 0 0 0 0 7 0 0 0 0 0 0 (257) ASP268 0 0 0 0 0 12 0 0 0 0 0 0 (260) MET271 0 0 0 0 0 2 0 0 0 0 0 0 (282) PRO293 0 0 0 0 0 0 0 0 0 0 2 0 (304) GLN315 0 0 0 0 0 9 0 0 0 0 0 0 (308) PHE319 0 0 0 0 0 43 0 0 0 0 0 0 prot.sequence sefghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficsSCnNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRaryvsasaraileeqgglawlqqlressyeeahkalcilpgvgtqvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaqavlfsadlrq >1yqr_A:DNA-glycosylase;TATA-box_binding_protein-like; title=CATALYTICALLY INACTIVE HUMAN 8-OXOGUANINE GLYCOSYLASE CROSSLINKED TO OXOG CONTAINING DNA organism=Homo sapiens DNA sequence DG(B1):DC(C30) DG(B2):DC(C29) DT(B3):DA(C28) DA(B4):DT(C27) DG(B5):DC(C26) DA(B6):DT(C25) DC(B7):DG(C24) DC(B8):8OG(C23) DT(B9):DA(C22) DG(B10):DC(C21) DG(B11):DC(C20) DA(B12):DT(C19) DC(B13):DG(C18) DG(B14):DC(C17) chainA ( 37) PHE45 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (133) PHE144 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (136) SER147 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (137) SER148 0 0 0 0 0 0 12 0 0 0 0 0 0 0 (138) CYS149 0 0 0 0 0 0 8 1 4 0 0 0 0 0 (140) ASN151 0 0 0 0 0 0 0 0 3 1 0 0 0 0 (143) ARG154 0 0 0 0 0 0 0 3 23 0 0 0 0 0 (144) ILE155 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (192) TYR203 0 0 0 0 0 0 40 12 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (196) TYR207 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (238) GLN249 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (242) CYS253 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (246) MET257 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (255) PRO266 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (257) ASP268 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (260) MET271 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (282) PRO293 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (304) GLN315 0 0 0 0 0 0 0 9 0 0 0 0 0 0 (308) PHE319 0 0 0 0 0 0 0 46 0 0 0 0 0 0 prot.sequence sefghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficsSCnNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtqvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaqavlfsadlrq >1yrn_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE MATA1/MATALPHA2 HOMEODOMAIN HETERODIMER BOUND TO DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(C3):DG(D42) DA(C4):DT(D41) DT(C5):DA(D40) DG(C6):DC(D39) DT(C7):DA(D38) DA(C8):DT(D37) DA(C9):DT(D36) DT(C10):DA(D35) DT(C11):DA(D34) DT(C12):DA(D33) DA(C13):DT(D32) DT(C14):DA(D31) DT(C15):DA(D30) DA(C16):DT(D29) DC(C17):DG(D28) DA(C18):DT(D27) DT(C19):DA(D26) DC(C20):DG(D25) DA(C21):DT(D24) chainA ( 39) ARG115 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 ( 40) VAL116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 43) ILE119 0 0 0 0 0 0 0 0 0 0 0 0 3 4 2 0 0 0 0 ( 44) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 ( 47) MET123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 ( 48) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 12 prot.sequence ispqarafleqvfrrkqslnskekeevakkcgitplqvRVwfINkrMRs >1yrn_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE MATA1/MATALPHA2 HOMEODOMAIN HETERODIMER BOUND TO DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(C3):DG(D42) DA(C4):DT(D41) DT(C5):DA(D40) DG(C6):DC(D39) DT(C7):DA(D38) DA(C8):DT(D37) DA(C9):DT(D36) DT(C10):DA(D35) DT(C11):DA(D34) DT(C12):DA(D33) DA(C13):DT(D32) DT(C14):DA(D31) DT(C15):DA(D30) DA(C16):DT(D29) DC(C17):DG(D28) DA(C18):DT(D27) DT(C19):DA(D26) DC(C20):DG(D25) DA(C21):DT(D24) chainA ( 39) ARG115 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 ( 40) VAL116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 43) ILE119 0 0 0 0 0 0 0 0 0 0 0 0 3 4 2 0 0 0 0 ( 44) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 ( 47) MET123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 ( 48) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 12 chainB ( 5) ARG132 0 0 0 3 10 20 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG135 0 0 0 0 0 0 2 7 5 0 0 0 0 0 0 0 0 0 0 ( 51) ASN178 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) SER181 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ASN182 0 0 0 2 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG185 0 0 21 14 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ispqarafleqvfrrkqslnskekeevakkcgitplqvRVwfINkrMRs/tkpyRghRftkenvrileswfaknienpyldtkglenlmkntslsriqikNwvSNrrRkektitiapeladllsgepl >1ysa_C:Leucine_zipper_domain; title=THE GCN4 BASIC REGION LEUCINE ZIPPER BINDS DNA AS A DIMER OF UNINTERRUPTED ALPHA HELICES: CRYSTAL STRUCTURE OF THE PROTEIN-DNA COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(B21):DT(A19) DC(B24):DG(A18) DT(B25):DA(A17) DG(B26):DC(A16) DG(B27):DC(A15) DA(B28):DT(A14) DT(B29):DA(A13) DG(B30):DC(A12) DA(B31):DT(A11) DG(B32):DC(A10) DT(B33):DA(A9) DC(B34):DG(A8) DA(B35):DT(A7) DT(B36):DA(A6) DA(B37):DT(A5) DG(B38):DC(A4) DG(B39):DC(A3) DA(B40):DT(A2) chainC ( 7) LYS231 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASN235 0 0 0 0 0 4 5 8 4 0 0 0 0 0 0 0 0 0 ( 12) THR236 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 14) ALA238 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ALA239 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 19) ARG243 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 prot.sequence kdpaalKrarNTeAArrsRarklqrmkqledkveellsknyhlenevarlkklvger >1ysa_CD:Leucine_zipper_domain; title=THE GCN4 BASIC REGION LEUCINE ZIPPER BINDS DNA AS A DIMER OF UNINTERRUPTED ALPHA HELICES: CRYSTAL STRUCTURE OF THE PROTEIN-DNA COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(B21):DT(A19) DC(B24):DG(A18) DT(B25):DA(A17) DG(B26):DC(A16) DG(B27):DC(A15) DA(B28):DT(A14) DT(B29):DA(A13) DG(B30):DC(A12) DA(B31):DT(A11) DG(B32):DC(A10) DT(B33):DA(A9) DC(B34):DG(A8) DA(B35):DT(A7) DT(B36):DA(A6) DA(B37):DT(A5) DG(B38):DC(A4) DG(B39):DC(A3) DA(B40):DT(A2) chainC ( 7) LYS231 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASN235 0 0 0 0 0 4 5 8 4 0 0 0 0 0 0 0 0 0 ( 12) THR236 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 14) ALA238 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ALA239 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 19) ARG243 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 chainD ( 8) LYS231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 12) ASN235 0 0 0 0 0 0 0 0 0 0 3 5 7 3 0 0 0 0 ( 13) THR236 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 15) ALA238 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 16) ALA239 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 19) SER242 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 20) ARG243 0 0 0 0 0 0 0 0 7 13 3 0 0 0 0 0 0 0 prot.sequence kdpaalKrarNTeAArrsRarklqrmkqledkveellsknyhlenevarlkklvger/mkdpaalKrarNTeAArrSRarklqrmkqledkveellsknyhlenevarlkklvge >1ytb_A:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF A YEAST TBP/TATA-BOX COMPLEX organism=Saccharomyces cerevisiae DNA sequence DG(C1):DC(C29) DT(C2):DA(C28) DA(C3):DT(C27) DT(C4):DA(C26) DA(C5):DT(C25) DT(C6):DA(C24) DA(C7):DT(C23) DA(C8):DT(C22) DA(C9):DT(C21) DA(C10):DT(C20) DC(C11):DG(C19) DG(C12):DC(C18) DG(C13):DG(C17) chainA ( 9) ASN69 0 0 0 0 6 6 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 8 3 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 4 3 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 6 2 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 5 6 0 0 0 0 0 0 0 (101) VAL161 0 0 0 2 5 0 0 0 0 0 0 0 0 (130) PHE190 0 9 19 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 5 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 3 3 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 5 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 1 3 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 2 6 0 0 0 0 0 0 0 0 prot.sequence sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm >1ytf_A:TATA-box_binding_protein-like; title=YEAST TFIIA/TBP/DNA COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(E1):DA(F16) DG(E2):DC(F15) DT(E3):DA(F14) DA(E4):DT(F13) DT(E5):DA(F12) DG(E6):DC(F11) DT(E7):DA(F10) DA(E8):DT(F9) DT(E9):DA(F8) DA(E10):DT(F7) DT(E11):DA(F6) DA(E12):DT(F5) DA(E13):DT(F4) DA(E14):DT(F3) DA(E15):DT(F2) DC(E16):DG(F1) chainA ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 prot.sequence sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm >1ytf_AC:Transcription_factor_IIA_TFIIA,_beta-barrel_domain;TATA-box_binding_protein-like; title=YEAST TFIIA/TBP/DNA COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(E1):DA(F16) DG(E2):DC(F15) DT(E3):DA(F14) DA(E4):DT(F13) DT(E5):DA(F12) DG(E6):DC(F11) DT(E7):DA(F10) DA(E8):DT(F9) DT(E9):DA(F8) DA(E10):DT(F7) DT(E11):DA(F6) DA(E12):DT(F5) DA(E13):DT(F4) DA(E14):DT(F3) DA(E15):DT(F2) DC(E16):DG(F1) chainA ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 chainC prot.sequence sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm/enlmlclyDkVtrtkarwkcslkdgvvtinrndytfqkAqveaewv >1yui_A:beta-beta-alpha_zinc_fingers; title=SOLUTION NMR STRUCTURE OF THE GAGA FACTOR/DNA COMPLEX, REGULARIZED MEAN STRUCTURE organism=DROSOPHILA MELANOGASTER DNA sequence DG(B101):DC(C122) DC(B102):DG(C121) DC(B103):DG(C120) DG(B104):DC(C119) DA(B105):DT(C118) DG(B106):DC(C117) DA(B107):DT(C116) DG(B108):DC(C115) DT(B109):DA(C114) DA(B110):DT(C113) DC(B111):DG(C112) chainA ( 5) ARG14 0 0 0 0 0 11 10 3 0 0 0 ( 7) LYS16 0 0 0 4 5 3 0 0 0 0 0 ( 18) ARG27 0 0 0 0 0 0 8 16 1 0 0 ( 21) SER30 0 0 0 0 0 0 0 0 1 0 0 ( 36) GLN45 0 0 0 0 11 0 0 0 0 0 0 ( 38) ARG47 0 0 0 0 0 11 17 0 0 0 0 ( 39) ASN48 0 0 0 4 9 0 0 0 0 0 0 ( 42) ARG51 0 0 11 12 3 0 0 0 0 0 0 prot.sequence pkakRaKhppgtekprsRsqSeqpatcpicyavirQsRNlrRhlelrhfakpgv >1yuj_A:C2H2_and_C2HC_zinc_fingers; title=SOLUTION NMR STRUCTURE OF THE GAGA FACTOR/DNA COMPLEX, 50 STRUCTURES organism=DROSOPHILA MELANOGASTER DNA sequence DG(B101):DC(C122) DC(B102):DG(C121) DC(B103):DG(C120) DG(B104):DC(C119) DA(B105):DT(C118) DG(B106):DC(C117) DA(B107):DT(C116) DG(B108):DC(C115) DT(B109):DA(C114) DA(B110):DT(C113) DC(B111):DG(C112) chainA ( 5) ARG14 0 0 0 0 0 8 9 0 0 0 0 ( 7) LYS16 0 0 0 3 6 5 0 0 0 0 0 ( 18) ARG27 0 0 0 0 0 0 14 9 1 0 0 ( 21) SER30 0 0 0 0 0 0 0 0 3 0 0 ( 22) GLU31 0 0 0 0 0 0 1 0 0 0 0 ( 36) GLN45 0 0 0 0 8 0 0 0 0 0 0 ( 38) ARG47 0 0 0 0 0 11 22 0 0 0 0 ( 39) ASN48 0 0 0 5 9 0 0 0 0 0 0 ( 42) ARG51 0 0 12 11 3 0 0 0 0 0 0 prot.sequence pkakRaKhppgtekprsRsqSEqpatcpicyavirQsRNlrRhlelrhfakpgv >1z19_B:DNA_breaking-rejoining_enzymes; title=CRYSTAL STRUCTURE OF A LAMBDA INTEGRASE(75-356) DIMER BOUND TO A COC' CORE SITE organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DA(E54):DT(C13) DA(E55):DT(C12) DA(E56):DT(C11) DG(E57):DC(C10) DC(E58):DG(C9) DT(E59):DA(C8) DG(E60):DC(C7) DA(E61):DT(C6) DA(E62):DT(C5) DC(E63):DG(C4) DG(E64):DC(C3) DA(E65):DT(C2) chainB ( 22) LYS95 0 0 8 8 2 0 0 0 0 0 0 0 ( 23) THR96 0 5 0 0 0 0 0 0 0 0 0 0 ( 26) ASN99 0 5 10 2 0 0 0 0 0 0 0 0 ( 27) TYR100 3 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER102 0 0 0 0 1 0 0 0 0 0 0 0 ( 65) ALA138 0 1 1 0 0 0 0 0 0 0 0 0 ( 66) SER139 0 0 1 0 0 0 0 0 0 0 0 0 ( 69) LEU142 0 4 4 0 0 0 0 0 0 0 0 0 (162) LYS235 4 4 0 0 0 0 0 0 0 0 0 0 (203) ARG276 0 0 0 0 0 0 0 0 0 0 1 0 (208) SER281 0 0 0 0 0 0 0 1 0 0 0 0 (211) THR284 0 0 0 0 0 0 0 0 5 0 0 0 (213) SER286 0 0 0 0 0 2 0 0 0 0 0 0 (214) ARG287 0 0 0 0 0 11 7 9 3 0 0 0 (215) TYR288 0 0 0 0 0 0 0 0 0 2 3 0 prot.sequence mtlhswldryekilasrgikqKTliNYmSkikairrglpdapledittkeiaamlngyidegkaASakLirstlsdafreaiaeghittnhvaatraakskvrRsrltadeylkiyqaaesspcwlrlamelavvtgqrvgdlcemkwsdivdgylyveqsKtgvkiaiptalhidalgismketldkckeilggetiiastRreplSsgTvSRYfmrarkasglsfegdpptfhelrslsarlyekqisdkfaqhllghksdtmasqrddrgrewdkieik >1z1b_A:DNA_breaking-rejoining_enzymes;DNA-binding_domain; title=CRYSTAL STRUCTURE OF A LAMBDA INTEGRASE DIMER BOUND TO A COC' CORE SITE organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DG(G28):DC(F25) DG(G29):DC(F24) DT(G30):DA(F23) DA(G31):DT(F22) DT(G32):DA(F21) DT(G33):DA(F20) DT(G34):DA(F19) DT(G35):DA(F18) DG(G36):DC(F17) DA(G37):DT(F16) DC(G38):DG(F15) DT(G39):DA(F14) DG(G40):DC(F13) DA(G41):DT(F12) DT(G42):DA(F11) DA(G43):DT(F10) DG(G44):DC(F9) DT(G45):DA(F8) DG(G46):DC(F7) DA(G47):DT(F6) DC(G48):DG(F5) DC(G49):DG(F4) DT(G50):DA(F3) DG(G51):DC(F2) DT(G52):DA(F1) chainA ( 10) TYR17 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ARG19 0 0 0 0 0 0 0 0 16 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ASN20 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) TYR23 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG27 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) GLU34 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence errdlppnlYiRNngYycyRdprtgkEfglgrdrriaiteaiqanielfsghkhkpltarinsdnsvtlhswldryekilasrgikqktlinymskikairrglpdapledittkeiaamlngyidegkaasaklirstlsdafreaiaeghittnhvaatraakskvrrsrltadeylkiyqaaesspcwlrlamelavvtgqrvgdlcemkwsdivdgylyveqsktgvkiaiptalhidalgismketldkckeilggetiiastrreplssgtvsryfmrarkasglsfegdpptfhelrslsarlyekqisdkfaqhllghksdtmasqrddrgrewdkieik >1z1g_A:DNA_breaking-rejoining_enzymes;DNA-binding_domain; title=CRYSTAL STRUCTURE OF A LAMBDA INTEGRASE TETRAMER BOUND TO A HOLLIDAY JUNCTION organism=? DNA sequence DA(I1):DT(J29) DA(I2):DT(J28) DC(I3):DG(J27) DT(I4):DA(J26) DC(I5):DG(J25) DT(I6):DA(J24) DG(I7):DC(J23) DC(I8):DG(J22) DT(I9):DA(J21) DT(I10):DA(J20) DT(I11):DA(J19) DT(I12):DA(J18) DT(I13):DT(J16) chainA ( 88) LYS95 0 0 0 0 0 0 1 2 1 0 0 0 0 ( 89) THR96 0 0 0 0 0 0 0 0 0 4 2 0 0 ( 92) ASN99 0 0 0 0 0 0 0 2 14 4 0 0 0 (131) ALA138 0 0 0 0 0 0 0 0 0 1 0 0 0 (135) LEU142 0 0 0 0 0 0 0 0 0 2 1 0 0 (228) LYS235 0 0 0 0 0 0 0 0 0 1 4 0 0 (280) ARG287 0 0 0 4 10 6 0 0 0 0 0 0 0 (331) MET338 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence errdlppnlyirnngyycyrdprtgkefglgrdrriaiteaiqanielfsghkhkpltarinsdnsvtlhswldryekilasrgikqKTliNymskikairrglpdapledittkeiaamlngyidegkaAsakLirstlsdafreaiaeghittnhvaatraaksevrrsrltadeylkiyqaaesspcwlrlamelavvtgqrvgdlcemkwsdivdgylyveqsKtgvkiaiptalhidalgismketldkckeilggetiiastrreplssgtvsRyfmrarkasglsfegdpptfhelrslsarlyekqisdkfaqhllghksdtMasqfrddrgrewdkieik >1z63_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=SULFOLOBUS SOLFATARICUS SWI2/SNF2 ATPASE CORE IN COMPLEX WITH DSDNA organism=SULFOLOBUS SOLFATARICUS DNA sequence DA(C7):DT(D20) DT(C8):DA(D19) DT(C9):DA(D18) DG(C10):DC(D17) DC(C11):DG(D16) DC(C12):DG(D15) DG(C13):DC(D14) DA(C14):DT(D13) DA(C15):DT(D12) DG(C16):DC(D11) DA(C17):DT(D10) DC(C18):DG(D9) DG(C19):DC(D8) DA(C20):DT(D7) DA(C21):DT(D6) DA(C22):DT(D5) DA(C23):DT(D4) DA(C24):DT(D3) chainA (116) ARG547 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 prot.sequence fqllepynikanlrpyqikgfswmrfmnklgfgicladdmglgktlqtiavfsdakkeneltpslvicplsvlknweeelskfaphlrfavfhedrskikledydiilttyavllRdtrlkevewkyivideaqniknpqtkifkavkelkskyrialtgtpienkvddlwsimtflnpgllgsysefkskfatpikkgdnmakeelkaiispfilrrtkydkaiindlpdkietnvycnltpeqaamykaevenlfnnidsvtgikrkgmilstllklkqivdhpallkggeqsvrrsgkmirtmeiieealdegdkiaiftqfvdmgkiirniiekelntevpflygelskkerddiiskfqnnpsvkfivlsvkagfginltsanrvihfdrwwnpdqatdrvyrigqtrnvivhklisvgtleekidqllafkrslfkdiissgdswitelsteelrkvielsv >1z9c_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF OHRR BOUND TO THE OHRA PROMOTER: STRUCTURE OF MARR FAMILY PROTEIN WITH OPERATOR DNA organism=Bacillus subtilis DNA sequence DA(G2):DT(H29) DC(G3):DG(H28) DA(G4):DT(H27) DA(G5):DT(H26) DT(G6):DA(H25) DT(G7):DA(H24) DT(G8):DA(H23) DA(G9):DT(H22) DA(G10):DT(H21) DT(G11):DA(H20) DT(G12):DA(H19) DG(G13):DC(H18) DT(G14):DA(H17) DA(G15):DT(H16) DT(G16):DA(H15) DA(G17):DT(H14) DC(G18):DG(H13) DA(G19):DT(H12) DA(G20):DT(H11) DT(G21):DA(H10) DT(G22):DA(H9) DT(G23):DA(H8) DA(G24):DT(H7) DA(G25):DT(H6) DT(G26):DA(H5) DT(G27):DA(H4) DG(G28):DC(H3) DT(G29):DA(H2) chainA ( 59) ASP67 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) SER68 0 0 0 0 0 0 0 5 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR70 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR72 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG94 0 0 0 3 11 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlylDSgTlTpmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlhq >1z9c_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF OHRR BOUND TO THE OHRA PROMOTER: STRUCTURE OF MARR FAMILY PROTEIN WITH OPERATOR DNA organism=Bacillus subtilis DNA sequence DA(G2):DT(H29) DC(G3):DG(H28) DA(G4):DT(H27) DA(G5):DT(H26) DT(G6):DA(H25) DT(G7):DA(H24) DT(G8):DA(H23) DA(G9):DT(H22) DA(G10):DT(H21) DT(G11):DA(H20) DT(G12):DA(H19) DG(G13):DC(H18) DT(G14):DA(H17) DA(G15):DT(H16) DT(G16):DA(H15) DA(G17):DT(H14) DC(G18):DG(H13) DA(G19):DT(H12) DA(G20):DT(H11) DT(G21):DA(H10) DT(G22):DA(H9) DT(G23):DA(H8) DA(G24):DT(H7) DA(G25):DT(H6) DT(G26):DA(H5) DT(G27):DA(H4) DG(G28):DC(H3) DT(G29):DA(H2) chainA ( 59) ASP67 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) SER68 0 0 0 0 0 0 0 5 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR70 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR72 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG94 0 0 0 3 11 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 61) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 4 0 0 0 0 0 0 0 ( 63) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 65) THR72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 ( 70) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 prot.sequence klenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlylDSgTlTpmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlhq/mklenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlyldSgTlTpmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlh >1z9c_CD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF OHRR BOUND TO THE OHRA PROMOTER: STRUCTURE OF MARR FAMILY PROTEIN WITH OPERATOR DNA organism=Bacillus subtilis DNA sequence DC(J3):DG(I28) DA(J4):DT(I27) DA(J5):DT(I26) DT(J6):DA(I25) DT(J7):DA(I24) DA(J8):DT(I23) DA(J9):DT(I22) DA(J10):DT(I21) DT(J11):DA(I20) DT(J12):DA(I19) DG(J13):DC(I18) DT(J14):DA(I17) DA(J15):DT(I16) DT(J16):DA(I15) DA(J17):DT(I14) DC(J18):DG(I13) DA(J19):DT(I12) DA(J20):DT(I11) DT(J21):DA(I10) DT(J22):DA(I9) DA(J23):DT(I8) DA(J24):DT(I7) DA(J25):DT(I6) DT(J26):DA(I5) DT(J27):DA(I4) DG(J28):DC(I3) chainC ( 61) ASP67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 62) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 3 0 0 0 0 0 0 ( 64) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 ( 66) THR72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 71) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 chainD ( 61) SER68 0 0 0 0 0 0 5 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) THR70 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) THR72 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) PRO73 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG94 0 0 2 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmklenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlylDSgTlTpmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlh/mklenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlylDSgTlTPmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlh >1z9c_EF:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF OHRR BOUND TO THE OHRA PROMOTER: STRUCTURE OF MARR FAMILY PROTEIN WITH OPERATOR DNA organism=Bacillus subtilis DNA sequence DC(K3):DG(L28) DA(K4):DT(L27) DA(K5):DT(L26) DT(K6):DA(L25) DT(K7):DA(L24) DT(K8):DA(L23) DA(K9):DT(L22) DA(K10):DT(L21) DT(K11):DA(L20) DT(K12):DA(L19) DG(K13):DC(L18) DT(K14):DA(L17) DA(K15):DT(L16) DT(K16):DA(L15) DA(K17):DT(L14) DC(K18):DG(L13) DA(K19):DT(L12) DA(K20):DT(L11) DT(K21):DA(L10) DT(K22):DA(L9) DT(K23):DA(L8) DA(K24):DT(L7) DA(K25):DT(L6) DT(K26):DA(L5) DT(K27):DA(L4) DG(K28):DC(L3) DT(K29):DA(L2) chainE ( 60) ASP67 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) SER68 0 0 0 0 0 0 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) THR70 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) THR72 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG94 0 0 0 8 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 61) ASP67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 62) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 ( 64) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 ( 71) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 prot.sequence mklenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlylDSgTlTpmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlh/hmklenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlylDSgTlTpmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlh >1zaa_C:beta-beta-alpha_zinc_fingers; title=ZINC FINGER-DNA RECOGNITION: CRYSTAL STRUCTURE OF A ZIF268-DNA COMPLEX AT 2.1 ANGSTROMS organism=? DNA sequence DG(A2):DC(B11) DC(A3):DG(B10) DG(A4):DC(B9) DT(A5):DA(B8) DG(A6):DC(B7) DG(A7):DC(B6) DG(A8):DC(B5) DC(A9):DG(B4) DG(A10):DC(B3) DT(A11):DA(B2) chainC ( 16) ARG18 0 0 0 0 0 0 0 12 14 8 ( 18) ASP20 0 0 0 0 0 0 0 0 2 8 ( 19) GLU21 0 0 0 0 0 0 3 5 0 0 ( 22) ARG24 0 0 0 0 0 7 12 5 0 0 ( 44) ARG46 0 0 0 0 10 12 4 0 0 0 ( 45) SER47 0 0 0 0 0 0 0 1 0 0 ( 46) ASP48 0 0 0 0 0 1 7 4 0 0 ( 47) HIS49 0 0 0 25 10 0 0 0 0 0 ( 50) THR52 0 0 0 1 0 0 0 0 0 0 ( 72) ARG74 0 14 14 10 0 0 0 0 0 0 ( 74) ASP76 0 0 1 7 1 0 0 0 0 0 ( 75) GLU77 1 4 0 0 0 0 0 0 0 0 ( 78) ARG80 11 4 0 0 0 0 0 0 0 0 prot.sequence rpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlr >1zay_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=PURINE REPRESSOR-HYPOXANTHINE-MODIFIED-PURF-OPERATOR COMPLEX organism=Escherichia coli DNA sequence DA(M699) DA(M700) DC(M701) DG(M702) DA(M703) DA(M704) DA(M705) DA(M706) DT(M707) DT(M709) DT(M710) DT(M711) DT(M712) DC(M713) DG(M714) DT(M715) chainA ( 12) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) THR15 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 5 6 3 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 23 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 prot.sequence tikdvakranvSTTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgplerntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >1zbb_G:Histone-fold; title=STRUCTURE OF THE 4_601_167 TETRANUCLEOSOME organism=? DNA sequence DT(J1):DA(I347) DG(J2):DC(I346) DC(J3):DG(I345) DA(J4):DT(I344) DC(J5):DG(I343) DT(J6):DA(I342) DT(J7):DA(I341) DA(J8):DT(I340) DC(J9):DG(I339) DA(J10):DT(I338) DT(J11):DA(I337) DG(J12):DC(I336) DC(J13):DG(I335) DG(J14):DC(I334) DC(J15):DG(I333) DA(J16):DT(I332) DT(J17):DA(I331) DG(J18):DC(I330) DT(J19):DA(I329) DA(J20):DT(I328) DA(J21):DT(I327) DG(J22):DC(I326) DT(J23):DA(I325) DC(J24):DG(I324) DT(J25):DA(I323) DG(J26):DC(I322) DG(J27):DC(I321) DA(J28):DT(I320) DG(J29):DC(I319) DA(J30):DT(I318) DA(J31):DT(I317) DT(J32):DA(I316) DC(J33):DG(I315) DA(J34):DT(I314) DC(J35):DG(I313) DC(J36):DG(I312) DT(J37):DA(I311) DG(J38):DC(I310) DC(J39):DG(I309) DA(J40):DT(I308) DG(J41):DC(I307) DA(J42):DT(I306) DT(J43):DA(I305) DA(J44):DT(I304) DC(J45):DG(I303) DT(J46):DA(I302) DA(J47):DT(I301) DC(J48):DG(I300) DC(J49):DG(I299) DA(J50):DT(I298) DA(J51):DT(I297) DA(J52):DT(I296) DA(J53):DT(I295) DG(J54):DC(I294) DT(J55):DA(I293) DG(J56):DC(I292) DT(J57):DA(I291) DA(J58):DT(I290) DT(J59):DA(I289) DT(J60):DA(I288) DT(J61):DA(I287) DG(J62):DC(I286) DG(J63):DC(I285) DA(J64):DT(I284) DA(J65):DT(I283) DA(J66):DT(I282) DC(J67):DG(I281) DT(J68):DA(I280) DG(J69):DC(I279) DC(J70):DG(I278) DT(J71):DA(I277) DC(J72):DG(I276) DC(J73):DG(I275) DA(J74):DT(I274) DT(J75):DA(I273) DC(J76):DG(I272) DA(J77):DT(I271) DA(J78):DT(I270) DA(J79):DT(I269) DA(J80):DT(I268) DG(J81):DC(I267) DG(J82):DC(I266) DC(J83):DG(I265) DA(J84):DT(I264) DT(J85):DA(I263) DG(J86):DC(I262) DT(J87):DA(I261) DT(J88):DA(I260) DC(J89):DG(I259) DA(J90):DT(I258) DG(J91):DC(I257) DC(J92):DG(I256) DT(J93):DA(I255) DG(J94):DC(I254) DG(J95):DC(I253) DA(J96):DT(I252) DA(J97):DT(I251) DT(J98):DA(I250) DC(J99):DG(I249) DC(J100):DG(I248) DA(J101):DT(I247) DG(J102):DC(I246) DC(J103):DG(I245) DT(J104):DA(I244) DG(J105):DC(I243) DA(J106):DT(I242) DA(J107):DT(I241) DC(J108):DG(I240) DA(J109):DT(I239) DT(J110):DA(I238) DG(J111):DC(I237) DC(J112):DG(I236) DC(J113):DG(I235) DT(J114):DA(I234) DT(J115):DA(I233) DT(J116):DA(I232) DT(J117):DA(I231) DG(J118):DC(I230) DA(J119):DT(I229) DT(J120):DA(I228) DG(J121):DC(I227) DG(J122):DC(I226) DA(J123):DT(I225) DG(J124):DC(I224) DC(J125):DG(I223) DA(J126):DT(I222) DG(J127):DC(I221) DT(J128):DA(I220) DT(J129):DA(I219) DT(J130):DA(I218) DC(J131):DG(I217) DC(J132):DG(I216) DA(J133):DT(I215) DA(J134):DT(I214) DA(J135):DT(I213) DT(J136):DA(I212) DA(J137):DT(I211) DC(J138):DG(I210) DA(J139):DT(I209) DC(J140):DG(I208) DT(J141):DA(I207) DT(J142):DA(I206) DT(J143):DA(I205) DT(J144):DA(I204) DG(J145):DC(I203) DG(J146):DC(I202) DT(J147):DA(I201) DA(J148):DT(I200) DG(J149):DC(I199) DA(J151):DT(I197) DT(J152):DA(I196) DC(J153):DG(I195) DT(J154):DA(I194) DG(J155):DC(I193) DC(J156):DG(I192) DA(J157):DT(I191) DG(J158):DC(I190) DG(J159):DC(I189) DT(J160):DA(I188) DT(J161):DA(I187) DA(J162):DT(I186) DC(J163):DG(I185) DA(J164):DT(I184) DT(J165):DA(I183) DC(J166):DG(I182) DC(J167):DG(I181) DT(J168):DA(I180) DG(J169):DC(I179) DT(J170):DA(I178) DG(J171):DC(I177) DC(J172):DG(I176) DA(J173):DT(I175) DT(J174):DA(I174) DG(J175):DC(I173) DT(J176):DA(I172) DA(J177):DT(I171) DA(J178):DT(I170) DG(J179):DC(I169) DT(J180):DA(I168) DA(J181):DT(I167) DC(J182):DG(I166) DT(J183):DA(I165) DG(J184):DC(I164) DG(J185):DC(I163) DC(J186):DG(I162) DC(J187):DG(I161) DG(J188):DC(I160) DC(J189):DG(I159) DC(J190):DG(I158) DC(J191):DG(I157) DT(J192):DA(I156) DG(J193):DC(I155) DG(J194):DC(I154) DA(J195):DT(I153) DG(J196):DC(I152) DA(J197):DT(I151) DA(J198):DT(I150) DT(J199):DA(I149) DC(J200):DG(I148) DA(J201):DT(I147) DC(J202):DG(I146) DC(J203):DG(I145) DT(J204):DA(I144) DG(J205):DC(I143) DC(J206):DG(I142) DA(J207):DT(I141) DG(J208):DC(I140) DA(J209):DT(I139) DT(J210):DA(I138) DA(J211):DT(I137) DC(J212):DG(I136) DT(J213):DA(I135) DA(J214):DT(I134) DC(J215):DG(I133) DC(J216):DG(I132) DA(J217):DT(I131) DA(J218):DT(I130) DA(J219):DT(I129) DA(J220):DT(I128) DG(J221):DC(I127) DT(J222):DA(I126) DG(J223):DC(I125) DT(J224):DA(I124) DA(J225):DT(I123) DT(J226):DA(I122) DT(J227):DA(I121) DT(J228):DA(I120) DG(J229):DC(I119) DG(J230):DC(I118) DA(J231):DT(I117) DA(J232):DT(I116) DA(J233):DT(I115) DC(J234):DG(I114) DT(J235):DA(I113) DG(J236):DC(I112) DC(J237):DG(I111) DT(J238):DA(I110) DC(J239):DG(I109) DC(J240):DG(I108) DA(J241):DT(I107) DT(J242):DA(I106) DC(J243):DG(I105) DA(J244):DT(I104) DA(J245):DT(I103) DA(J246):DT(I102) DA(J247):DT(I101) DG(J248):DC(I100) DG(J249):DC(I99) DC(J250):DG(I98) DA(J251):DT(I97) DT(J252):DA(I96) DG(J253):DC(I95) DT(J254):DA(I94) DT(J255):DA(I93) DC(J256):DG(I92) DA(J257):DT(I91) DG(J258):DC(I90) DC(J259):DG(I89) DT(J260):DA(I88) DG(J261):DC(I87) DG(J262):DC(I86) DA(J263):DT(I85) DA(J264):DT(I84) DT(J265):DA(I83) DC(J266):DG(I82) DC(J267):DG(I81) DA(J268):DT(I80) DG(J269):DC(I79) DC(J270):DG(I78) DT(J271):DA(I77) DG(J272):DC(I76) DA(J273):DT(I75) DA(J274):DT(I74) DC(J275):DG(I73) DA(J276):DT(I72) DT(J277):DA(I71) DG(J278):DC(I70) DC(J279):DG(I69) DC(J280):DG(I68) DT(J281):DA(I67) DT(J282):DA(I66) DT(J283):DA(I65) DT(J284):DA(I64) DG(J285):DC(I63) DA(J286):DT(I62) DT(J287):DA(I61) DG(J288):DC(I60) DG(J289):DC(I59) DA(J290):DT(I58) DG(J291):DC(I57) DC(J292):DG(I56) DA(J293):DT(I55) DG(J294):DC(I54) DT(J295):DA(I53) DT(J296):DA(I52) DT(J297):DA(I51) DC(J298):DG(I50) DC(J299):DG(I49) DA(J300):DT(I48) DA(J301):DT(I47) DA(J302):DT(I46) DT(J303):DA(I45) DA(J304):DT(I44) DC(J305):DG(I43) DA(J306):DT(I42) DC(J307):DG(I41) DT(J308):DA(I40) DT(J309):DA(I39) DT(J310):DA(I38) DT(J311):DA(I37) DG(J312):DC(I36) DG(J313):DC(I35) DT(J314):DA(I34) DA(J315):DT(I33) DG(J316):DC(I32) DA(J318):DT(I30) DT(J319):DA(I29) DC(J320):DG(I28) DT(J321):DA(I27) DG(J322):DC(I26) DC(J323):DG(I25) DA(J324):DT(I24) DG(J325):DC(I23) DG(J326):DC(I22) DT(J327):DA(I21) DT(J328):DA(I20) DA(J329):DT(I19) DC(J330):DG(I18) DA(J331):DT(I17) DT(J332):DA(I16) DC(J333):DG(I15) DC(J334):DG(I14) DT(J335):DA(I13) DG(J336):DC(I12) DT(J337):DA(I11) DG(J338):DC(I10) DC(J339):DG(I9) DA(J340):DT(I8) DT(J341):DA(I7) DG(J342):DC(I6) DT(J343):DA(I5) DA(J344):DT(I4) DA(J345):DT(I3) DG(J346):DC(I2) DT(J347):DA(I1) chainG ( 1) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkte >1zbi_A:Ribonuclease_H-like; title=BACILLUS HALODURANS RNASE H CATALYTIC DOMAIN MUTANT D132N IN COMPLEX WITH 12-MER RNA/DNA HYBRID organism=Bacillus halodurans DNA sequence DG(D1) DA(D2) DA(D3) DT(D4) DC(D5) DA(D6) DG(D7) DG(D8) DT(D9) DG(D10) DT(D11) DC(D12) chainA ( 16) ASN77 0 0 0 4 0 0 0 0 0 0 0 0 ( 44) ASN105 0 0 0 0 6 0 0 0 0 0 0 0 ( 45) ASN106 0 0 0 0 5 0 0 0 0 0 0 0 ( 73) GLN134 0 0 0 0 0 1 1 0 0 0 0 0 ( 74) THR135 0 0 0 0 0 3 0 0 0 0 0 0 prot.sequence eiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygrk >1zbi_AB:Ribonuclease_H-like; title=BACILLUS HALODURANS RNASE H CATALYTIC DOMAIN MUTANT D132N IN COMPLEX WITH 12-MER RNA/DNA HYBRID organism=Bacillus halodurans DNA sequence DG(D1) DA(D2) DA(D3) DT(D4) DC(D5) DA(D6) DG(D7) DG(D8) DT(D9) DG(D10) DT(D11) DC(D12) chainA ( 16) ASN77 0 0 0 4 0 0 0 0 0 0 0 0 ( 44) ASN105 0 0 0 0 6 0 0 0 0 0 0 0 ( 45) ASN106 0 0 0 0 5 0 0 0 0 0 0 0 ( 73) GLN134 0 0 0 0 0 1 1 0 0 0 0 0 ( 74) THR135 0 0 0 0 0 3 0 0 0 0 0 0 chainB ( 19) ASN77 0 0 0 0 0 0 0 2 3 0 0 0 ( 47) ASN105 0 0 0 0 0 0 0 0 0 8 0 0 ( 48) ASN106 0 0 0 0 0 0 0 0 0 11 1 0 ( 77) THR135 0 0 0 0 0 0 0 0 0 1 1 0 prot.sequence eiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygrk/akeeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsqTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadyg >1zbl_AB:Ribonuclease_H-like; title=BACILLUS HALODURANS RNASE H CATALYTIC DOMAIN MUTANT D192N IN COMPLEX WITH 12-MER RNA/DNA HYBRID organism=Bacillus halodurans DNA sequence DG(D13) DA(D14) DA(D15) DT(D16) DC(D17) DA(D18) DG(D19) DG(D20) DT(D21) DG(D22) DT(D23) DC(D24) chainA ( 17) ASN77 0 0 0 0 0 0 0 0 5 1 0 0 ( 45) ASN105 0 0 0 0 0 0 0 0 0 8 0 0 ( 46) ASN106 0 0 0 0 0 0 0 0 0 10 0 0 ( 74) GLN134 0 0 0 0 0 0 0 0 0 0 0 2 ( 75) THR135 0 0 0 0 0 0 0 0 0 1 2 0 chainB ( 17) ASN77 0 0 4 1 0 0 0 0 0 0 0 0 ( 45) ASN105 0 0 0 6 0 0 0 0 0 0 0 0 ( 46) ASN106 0 0 0 5 0 0 0 0 0 0 0 0 ( 74) GLN134 0 0 0 0 0 1 0 0 0 0 0 0 ( 75) THR135 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikany/eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikany >1zbl_B:Ribonuclease_H-like; title=BACILLUS HALODURANS RNASE H CATALYTIC DOMAIN MUTANT D192N IN COMPLEX WITH 12-MER RNA/DNA HYBRID organism=Bacillus halodurans DNA sequence DG(D13) DA(D14) DA(D15) DT(D16) DC(D17) DA(D18) DG(D19) DG(D20) DT(D21) DG(D22) DT(D23) DC(D24) chainB ( 17) ASN77 0 0 4 1 0 0 0 0 0 0 0 0 ( 45) ASN105 0 0 0 6 0 0 0 0 0 0 0 0 ( 46) ASN106 0 0 0 5 0 0 0 0 0 0 0 0 ( 74) GLN134 0 0 0 0 0 1 0 0 0 0 0 0 ( 75) THR135 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikany >1zet_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=X-RAY DATA DO NOT SUPPORT HOOGSTEEN BASE-PAIRING DURING REPLICATION BY HUMAN POLYMERASE IOTA organism=Homo sapiens DNA sequence DA(T5):TTP(A451) DG(T6):DOC(P13) DG(T7):DC(P12) DG(T8):DC(P11) BRU(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) BRU(T12):DA(P7) BRU(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA ( 8) ASP34 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ASP36 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) CYS37 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) PHE38 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) TYR39 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) GLN59 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) LEU62 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) VAL64 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR65 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR68 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG71 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) LYS77 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LEU99 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASP126 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) GLU127 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) LYS214 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) SER301 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (279) GLU305 0 10 5 0 0 0 0 0 0 0 0 0 0 0 (317) ARG343 0 0 0 0 0 9 20 0 0 0 0 0 0 0 (331) ARG357 0 0 0 10 8 1 0 0 0 0 0 0 0 0 (333) SER359 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (335) GLN361 0 0 0 0 0 0 2 19 10 0 0 0 0 0 prot.sequence srvivhvdldcfYaqvemisnpelkdkplgvqQkyLvVtcnyearklgvkklmnvrdakekcpqlvlvngedLtryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssekhygReSrQcpipshviqklgtgnydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >1zg1_A:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=NARL COMPLEXED TO NIRB PROMOTER NON-PALINDROMIC TAIL-TO-TAIL DNA SITE organism=Escherichia coli DNA sequence DC(C1):DG(D40) DG(C2):DC(D39) DT(C3):DA(D38) DA(C4):DT(D37) DC(C5):DG(D36) DT(C6):DA(D35) DC(C7):DG(D34) DC(C8):DG(D33) DT(C9):DA(D32) DT(C10):DA(D31) DA(C11):DT(D30) DA(C12):DT(D29) DT(C13):DA(D28) DG(C14):DC(D27) DG(C15):DC(D26) DG(C16):DC(D25) DT(C17):DA(D24) DA(C18):DT(D23) DC(C19):DG(D22) DG(C20):DC(D21) chainA ( 35) SER185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 36) THR186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 38) LYS188 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 ( 39) VAL189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 0 0 ( 40) HIS190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 42) LYS192 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 0 prot.sequence rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif >1zg1_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=NARL COMPLEXED TO NIRB PROMOTER NON-PALINDROMIC TAIL-TO-TAIL DNA SITE organism=Escherichia coli DNA sequence DC(C1):DG(D40) DG(C2):DC(D39) DT(C3):DA(D38) DA(C4):DT(D37) DC(C5):DG(D36) DT(C6):DA(D35) DC(C7):DG(D34) DC(C8):DG(D33) DT(C9):DA(D32) DT(C10):DA(D31) DA(C11):DT(D30) DA(C12):DT(D29) DT(C13):DA(D28) DG(C14):DC(D27) DG(C15):DC(D26) DG(C16):DC(D25) DT(C17):DA(D24) DA(C18):DT(D23) DC(C19):DG(D22) DG(C20):DC(D21) chainA ( 35) SER185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 36) THR186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 38) LYS188 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 ( 39) VAL189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 0 0 ( 40) HIS190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 42) LYS192 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 0 chainB ( 35) SER185 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR186 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS188 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 ( 39) VAL189 0 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS190 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) LYS192 0 0 0 0 3 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif/rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif >1zg1_EF:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=NARL COMPLEXED TO NIRB PROMOTER NON-PALINDROMIC TAIL-TO-TAIL DNA SITE organism=Escherichia coli DNA sequence DC(G1):DG(H40) DG(G2):DC(H39) DT(G3):DA(H38) DA(G4):DT(H37) DC(G5):DG(H36) DC(G6):DG(H35) DC(G7):DG(H34) DA(G8):DT(H33) DT(G9):DA(H32) DT(G10):DA(H31) DA(G11):DT(H30) DA(G12):DT(H29) DG(G13):DC(H28) DG(G14):DC(H27) DA(G15):DT(H26) DG(G16):DC(H25) DT(G17):DA(H24) DA(G18):DT(H23) DC(G19):DG(H22) DG(G20):DC(H21) chainE ( 35) SER185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 36) THR186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 ( 38) LYS188 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 39) VAL189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 3 0 0 ( 40) HIS190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 42) LYS192 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 chainF ( 35) SER185 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR186 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS188 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 ( 39) VAL189 0 0 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS190 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) LYS192 0 0 0 0 4 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif/rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif >1zg5_A:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=NARL COMPLEXED TO NARG-89 PROMOTER PALINDROMIC TAIL-TO-TAIL DNA SITE organism=Escherichia coli DNA sequence DC(D21):DG(C20) DG(D22):DC(C19) DT(D23):DA(C18) DA(D24):DT(C17) DC(D25):DG(C16) DC(D26):DG(C15) DC(D27):DG(C14) DC(D28):DG(C13) DT(D29):DA(C12) DA(D30):DT(C11) DT(D31):DA(C10) DA(D32):DT(C9) DG(D33):DC(C8) DG(D34):DC(C7) DG(D35):DC(C6) DG(D36):DC(C5) DT(D37):DA(C4) DA(D38):DT(C3) DC(D39):DG(C2) DG(D40):DC(C1) chainA ( 35) SER185 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR186 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS188 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 39) VAL189 0 0 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS190 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) LYS192 0 0 0 0 5 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif >1zg5_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=NARL COMPLEXED TO NARG-89 PROMOTER PALINDROMIC TAIL-TO-TAIL DNA SITE organism=Escherichia coli DNA sequence DC(C1):DG(D40) DG(C2):DC(D39) DT(C3):DA(D38) DA(C4):DT(D37) DC(C5):DG(D36) DC(C6):DG(D35) DC(C7):DG(D34) DC(C8):DG(D33) DT(C9):DA(D32) DA(C10):DT(D31) DT(C11):DA(D30) DA(C12):DT(D29) DG(C13):DC(D28) DG(C14):DC(D27) DG(C15):DC(D26) DG(C16):DC(D25) DT(C17):DA(D24) DA(C18):DT(D23) DC(C19):DG(D22) DG(C20):DC(D21) chainA ( 35) SER185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 36) THR186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 38) LYS188 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 ( 39) VAL189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 3 0 0 ( 40) HIS190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 42) LYS192 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 5 0 0 0 0 chainB ( 35) SER185 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR186 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS188 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 39) VAL189 0 0 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS190 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) LYS192 0 0 0 0 3 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif/rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif >1zg5_EF:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=NARL COMPLEXED TO NARG-89 PROMOTER PALINDROMIC TAIL-TO-TAIL DNA SITE organism=Escherichia coli DNA sequence DC(H21):DG(G20) DG(H22):DC(G19) DT(H23):DA(G18) DA(H24):DT(G17) DC(H25):DG(G16) DC(H26):DG(G15) DC(H27):DG(G14) DC(H28):DG(G13) DT(H29):DA(G12) DA(H30):DT(G11) DT(H31):DA(G10) DA(H32):DT(G9) DG(H33):DC(G8) DG(H34):DC(G7) DG(H35):DC(G6) DG(H36):DC(G5) DT(H37):DA(G4) DA(H38):DT(G3) DC(H39):DG(G2) DG(H40):DC(G1) chainE ( 36) SER185 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR186 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS188 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 40) VAL189 0 0 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) HIS190 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS192 0 0 0 0 5 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 35) SER185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 36) THR186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 ( 38) LYS188 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 ( 39) VAL189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 3 0 0 ( 40) HIS190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 42) LYS192 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 5 0 0 0 0 prot.sequence erdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif/rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif >1zgw_A:Ada_DNA_repair_protein,_N-terminal_domain_N-Ada_10;Homeodomain-like; title=NMR STRUCTURE OF E. COLI ADA PROTEIN IN COMPLEX WITH DNA organism=ESCHERICHIA COLI DNA sequence DT(C221):DA(B207) DC(C222):DG(B206) DT(C223):DA(B205) DT(C224):DA(B204) DG(C225):DC(B203) DC(C226):DG(B202) DG(C227):DC(B201) DC(C228):DG(B200) DT(C229):DA(B199) DT(C230):DA(B198) DT(C231):DA(B197) DA(C232):DT(B196) DA(C233):DT(B195) DT(C234):DA(B194) DT(C235):DA(B193) DT(C236):DA(B192) DG(C237):DC(B191) DC(C238):DG(B190) chainA ( 34) THR34 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 43) ALA44 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 44) ARG45 0 0 0 0 0 0 0 0 0 0 0 6 18 10 0 0 0 0 ( 70) ARG71 0 0 0 0 0 0 0 0 0 4 6 6 0 0 0 0 0 0 (113) PHE114 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) HIS115 0 0 0 0 0 8 14 0 0 0 0 0 0 0 0 0 0 0 (116) HIS117 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ARG118 0 0 0 7 14 16 4 0 0 0 0 0 0 0 0 0 0 0 (128) LYS129 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkkatcltddqrwqsvlardpnadgefvfavrtTgifrpscrARhalrenvsfyanasealaagfrpckRcqpdkanprqhrldkithacrlleqetpvtlealadqvamspFHlHRlfkattgmtpKawqqawrarr >1zjm_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA COMPLEXED WITH DNA CONTAINING AN A-A MISMATCHED PRIMER TERMINUS organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 38 ( 26) LYS35 0 0 0 0 9 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zjn_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA COMPLEXED WITH DNA CONTAINING AN A-A MISMATCHED PRIMER TERMINUS WITH DGTP organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DA(P10):DA(T7) chainA (225) LYS234 0 0 0 0 0 0 0 3 3 0 (227) MET236 0 0 0 0 0 0 0 1 0 0 (274) ARG283 0 0 0 0 0 0 0 0 0 3 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfMgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrs >1zla_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=X-RAY STRUCTURE OF A KAPOSI'S SARCOMA HERPESVIRUS LANA PEPTIDE BOUND TO THE NUCLEOSOMAL CORE organism=EXPRESSION VECTOR PET3-H2A / XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J239):DA(I55) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS439 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 29) ARG842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG1230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 1) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvhimpkdiqlarrirgera/dNIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnwerdnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvhimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyAervgagapvylaavleyltaeilelagnwerdnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >1zla_C:Histone-fold; title=X-RAY STRUCTURE OF A KAPOSI'S SARCOMA HERPESVIRUS LANA PEPTIDE BOUND TO THE NUCLEOSOMAL CORE organism=? DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I55):DT(J239) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainC ( 29) ARG842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnwerdnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt >1zlk_A:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS HYPOXIC RESPONSE REGULATOR DOSR C-TERMINAL DOMAIN-DNA COMPLEX organism=Mycobacterium tuberculosis DNA sequence DG(D10):DC(C31) DT(D11):DA(C30) DT(D12):DA(C29) DA(D13):DT(C28) DG(D14):DC(C27) DG(D15):DC(C26) DG(D16):DC(C25) DA(D17):DT(C24) DC(D18):DG(C23) DT(D19):DA(C22) DT(D20):DA(C21) DT(D21):DA(C20) DA(D22):DT(C19) DG(D23):DC(C18) DT(D24):DA(C17) DC(D25):DG(C16) DC(D26):DG(C15) DC(D27):DG(C14) DC(D28):DG(C13) DA(D29):DT(C12) DA(D30):DT(C11) DA(D31):DT(C10) chainA ( 35) LYS179 0 0 0 0 0 8 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR180 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS182 0 0 0 0 0 0 0 2 13 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ASN183 0 0 0 0 5 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR184 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER186 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dplsgltdqertllgllsegltnkqiadrmflaeKTvKNYvSrllaklgmerrtqaavfatelkr >1zlk_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS HYPOXIC RESPONSE REGULATOR DOSR C-TERMINAL DOMAIN-DNA COMPLEX organism=Mycobacterium tuberculosis DNA sequence DG(D10):DC(C31) DT(D11):DA(C30) DT(D12):DA(C29) DA(D13):DT(C28) DG(D14):DC(C27) DG(D15):DC(C26) DG(D16):DC(C25) DA(D17):DT(C24) DC(D18):DG(C23) DT(D19):DA(C22) DT(D20):DA(C21) DT(D21):DA(C20) DA(D22):DT(C19) DG(D23):DC(C18) DT(D24):DA(C17) DC(D25):DG(C16) DC(D26):DG(C15) DC(D27):DG(C14) DC(D28):DG(C13) DA(D29):DT(C12) DA(D30):DT(C11) DA(D31):DT(C10) chainA ( 35) LYS179 0 0 0 0 0 8 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR180 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS182 0 0 0 0 0 0 0 2 13 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ASN183 0 0 0 0 5 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR184 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER186 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 35) LYS179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 3 0 0 0 0 0 ( 36) THR180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 38) LYS182 0 0 0 0 0 0 0 0 0 0 0 0 5 13 1 0 0 0 0 0 0 0 ( 39) ASN183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 5 5 0 0 0 0 ( 40) TYR184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 42) SER186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence dplsgltdqertllgllsegltnkqiadrmflaeKTvKNYvSrllaklgmerrtqaavfatelkr/dplsgltdqertllgllsegltnkqiadrmflaeKTvKNYvSrllaklgmerrtqaavfatelkr >1zm5_A:Origin_of_replication-binding_domain,_RBD-like; title=CONJUGATIVE RELAXASE TRWC IN COMPLEX WITH ORIT DNA, COOPER-BOUND STRUCTURE organism=ESCHERICHIA COLI DNA sequence DG(B3):DC(B16) DC(B4):DG(B15) DA(B5):DT(B14) DC(B6):DG(B13) DC(B7):DG(B12) DG(B8):DA(B10) chainA ( 73) ALA73 0 0 0 5 2 0 ( 75) ARG75 0 5 12 8 0 0 ( 81) ARG81 3 0 0 0 0 0 (128) ARG128 7 12 12 0 0 0 (130) LYS130 0 0 0 7 0 0 (178) ARG178 0 0 0 0 0 1 prot.sequence mlshmvltrqdigraasyyedgaddyyakdgdasewqgkgaeelglsgevdskrfrellagnigeghrimrsAtRqdskeRigldltfsapksvslqalvagdaeiikahdravartleqaearaqaRqKiqgktriettgnlvigkfrhetsrerdpqlhthavilnmtkrsdgqwRalkndeivkatrylgavynaelahelqklgyqlrygkdgnfdlahidrqqiegfskrteqiaewyaargldpnsvsleqkqaakvlsrakktsvdrealraewqatakelgidfs >1zme_CD:Zn2/Cys6_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PUT3/DNA COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(A2):DG(B17) DG(A3):DC(B16) DG(A4):DC(B15) DG(A5):DC(B14) DA(A6):5IU(B13) DA(A7):DT(B12) DG(A8):DC(B11) DC(A9):DG(B10) DC(A10):DG(B9) DA(A11):DT(B8) DA(A12):5IU(B7) DC(A13):DG(B6) DT(A14):DA(B5) DC(A15):DG(B4) DC(A16):DG(B3) DG(A17):DC(B2) chainC ( 11) HIS41 11 9 15 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 11) HIS41 0 0 0 0 0 0 0 0 0 0 0 0 0 17 18 13 ( 37) LYS67 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 ( 39) ILE69 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 ( 40) VAL70 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 prot.sequence svaclscrkrHikcpggnpcqkcvtsnaiceylepskkivvstkylqqlqkdlndkteennrlkalller/svaclscrkrHikcpggnpcqkcvtsnaiceylepsKkIVvstkylqqlqkdlndkteennrlkalller >1zme_D:Zn2/Cys6_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PUT3/DNA COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(A2):DG(B17) DG(A3):DC(B16) DG(A4):DC(B15) DG(A5):DC(B14) DA(A6):5IU(B13) DA(A7):DT(B12) DG(A8):DC(B11) DC(A9):DG(B10) DC(A10):DG(B9) DA(A11):DT(B8) DA(A12):5IU(B7) DC(A13):DG(B6) DT(A14):DA(B5) DC(A15):DG(B4) DC(A16):DG(B3) DG(A17):DC(B2) chainD ( 11) HIS41 0 0 0 0 0 0 0 0 0 0 0 0 0 17 18 13 ( 37) LYS67 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 ( 39) ILE69 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 ( 40) VAL70 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 prot.sequence svaclscrkrHikcpggnpcqkcvtsnaiceylepsKkIVvstkylqqlqkdlndkteennrlkalller >1zns_A:His-Me_finger_endonucleases; title=CRYSTAL STRUCTURE OF N-COLE7/12-BP DNA/ZN COMPLEX organism=ESCHERICHIA COLI STR. K12 SUBSTR. DNA sequence DC(B1):DG(C24) DG(B2):DC(C23) DG(B3):DC(C22) DG(B4):DC(C21) DA(B5):DT(C20) DT(B6):DA(C19) DA(B7):DT(C18) DT(B8):DA(C17) DC(B9):DG(C16) DC(B10):DG(C15) DC(B11):DG(C14) chainA ( 44) ASP493 0 0 0 0 0 4 3 0 0 0 0 ( 45) ASP494 0 0 0 0 0 0 0 0 0 1 0 ( 47) ARG496 0 0 0 0 0 7 4 0 0 0 0 ( 48) LYS497 0 0 0 0 0 0 0 0 0 2 0 ( 89) ARG538 0 0 3 8 0 0 0 0 0 0 0 prot.sequence pgkatgkgkpvnnkwlnnagkdlgspvpdrianklrdkefksfDDfRKkfweevskdpelskqfsrnnndrmkvgkapktrtqdvsgkRtsfelheekvydmdnisvvtpkrhidihr >1zq3_P:Homeodomain-like; title=NMR SOLUTION STRUCTURE OF THE BICOID HOMEODOMAIN BOUND TO THE CONSENSUS DNA BINDING SITE TAATCC organism=DROSOPHILA MELANOGASTER DNA sequence DC(B82):DG(A81) DG(B83):DC(A80) DG(B84):DC(A79) DG(B85):DC(A78) DG(B86):DC(A77) DA(B87):DT(A76) DT(B88):DA(A75) DT(B89):DA(A74) DA(B90):DT(A73) DG(B91):DC(A72) DA(B92):DT(A71) DG(B93):DC(A70) DC(B94):DG(A69) chainP ( 4) ARG4 0 0 0 0 0 0 0 8 10 16 0 0 0 ( 48) ILE48 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 51) LYS51 0 0 5 13 1 2 0 0 0 0 0 0 0 ( 52) ASN52 0 0 0 0 0 0 4 6 0 0 0 0 0 ( 55) ARG55 0 0 0 0 9 8 0 0 0 0 0 0 0 ( 56) ARG56 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence gprRtrttftssqiaeleqhflqgryltaprladlsaklalgtaqvkIwfKNrrRRhkiqsdqhkdqs >1zqa_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (150 MILLIMOLAR) AT PH 7.5 organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 2 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqb_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF BACL2 (150 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 3 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CACL2 (15 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqd_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CACL2 (150 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 3 1 0 0 0 0 (228) MET236 0 2 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfMgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqe_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CRCL3 (SATURATED SOLUTION) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 2 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqf_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CSCL (150 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqg_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF A SODIUM-FREE ARTIFICIAL MOTHER LIQUOR AT PH 6.5 organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 2 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqh_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF A SODIUM-FREE ARTIFICIAL MOTHER LIQUOR AT PH 7.5 organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 0 2 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqi_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (150 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 2 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqj_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CACL2 (15 MILLIMOLAR) AND MGCL2 (15 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqk_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (75 MILLIMOLAR) AND MGCL2 (75 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 3 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zql_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (15 MILLIMOLAR) AND MGCL2 (15 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 3 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqm_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (15 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 2 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqn_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF BACL2 (15 MILLIMOLAR) AND NACL (15 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 3 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqo_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CACL2 (15 MILLIMOLAR) AND NACL (15 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 2 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqp_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (75 MILLIMOLAR) AND NACL (75 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 3 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (15 MILLIMOLAR) AND NACL (15 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 2 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqr_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF NICL2 organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 2 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqs_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF TLCL (0.5 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 3 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zqt_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (0.01 MILLIMOLAR) AND ZNCL2 (0.02 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 2 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >1zr2_A:Resolvase-like;Homeodomain-like; title=STRUCTURE OF A SYNAPTIC GAMMA-DELTA RESOLVASE TETRAMER COVALENTLY LINKED TO TWO CLEAVED DNAS organism=Escherichia coli DNA sequence DC(X2):DG(Y35) DA(X3):DT(Y34) DG(X4):DC(Y33) DT(X5):DA(Y32) DG(X6):DC(Y31) DT(X7):DA(Y30) DC(X8):DG(Y29) DC(X9):DG(Y28) DG(X10):DC(Y27) DA(X11):DT(Y26) DT(X12):DA(Y25) DA(X13):DT(Y24) DA(X14):DT(Y23) DT(X15):DA(Z22) DT(X16):DA(Z21) DT(X17):DA(Z20) chainA (130) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 2 (142) ARG142 0 0 0 0 0 0 0 0 0 0 7 10 5 0 0 0 (171) ALA171 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 (172) ARG172 0 0 0 14 9 5 0 0 0 0 0 0 0 0 0 0 (173) SER173 0 0 0 0 0 0 2 8 3 0 0 0 0 0 0 0 (174) THR174 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (176) TYR176 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 (177) LYS177 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence malfgyarvstsqqsldiqvralkdagvkanriftdkasgsssdrkgldllrmkvkegdvilvkkldrlgrdtadmiqlikefdaqgvsirfiddgistdsyigkmvvtilsavaqaerqrilqrtnegRqeamakgvvfgRkrkidrdavlnmwqqglgashisktmniARSTvYKvinesn >1zr4_A:Resolvase-like;Homeodomain-like; title=STRUCTURE OF A SYNAPTIC GAMMA-DELTA RESOLVASE TETRAMER COVALENTLY LINKED TO TWO CLEAVED DNAS organism=Escherichia coli DNA sequence DC(X2):DG(Y35) DA(X3):DT(Y34) DG(X4):DC(Y33) DT(X5):DA(Y32) DG(X6):DC(Y31) DT(X7):DA(Y30) DC(X8):DG(Y29) DC(X9):DG(Y28) DG(X10):DC(Y27) DA(X11):DT(Y26) DT(X12):DA(Y25) DA(X13):DT(Y24) DA(X14):DT(Y23) DT(X15):DA(Z22) DT(X16):DA(Z21) DT(X17):DA(Z20) chainA ( 11) THR11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (126) THR126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (130) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 1 (140) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (142) ARG142 0 0 0 0 0 0 0 0 0 0 7 9 3 0 0 0 (171) ALA171 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (172) ARG172 0 0 0 5 9 2 0 0 0 0 0 0 0 0 0 0 (173) SER173 0 0 0 0 0 0 2 9 5 0 0 0 0 0 0 0 (174) THR174 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (176) TYR176 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 (177) LYS177 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence malfgyarvsTsqqsldiqvralkdagvkanriftdkasgsssdrkgldllrmkvkegdvilvkkldrlgrdtadmiqlikefdaqgvsirfiddgistdsyigkmvvtilsavaqaerqrilqrTnegRqeamakgvvFgRkrkidrdavlnmwqqglgashisktmniARSTvYKvinesn >1zrc_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=4 CRYSTAL STRUCTURES OF CAP-DNA WITH ALL BASE-PAIR SUBSTITUTIONS AT POSITION 6, CAP-ICAP38 DNA organism=Escherichia coli DNA sequence DA(X9):DT(W9) DT(X8):DA(W8) DC(X7):DG(W7) DA(X6):DT(W6) DC(X5):DG(W5) DA(X4):DT(W4) DT(X3):DA(W3) DT(X2):DA(W2) DT(X1):DA(W1) DT(X-1):DA(W-1) DT(X-2):DA(W-2) DC(X-3):DG(W-3) DG(X-4):DC(W-4) DA(X-5):DT(W-5) DA(X-6):DT(W-6) DA(X-7):DT(W-7) DT(X-8):DA(W-8) chainA (163) GLN170 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (172) SER179 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG180 0 0 0 3 12 5 0 0 0 0 0 0 0 0 0 0 0 (174) GLU181 0 5 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) THR182 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ARG185 0 6 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcSRETvgRilkmledqnlisahgktivvyg >1zrd_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=4 CRYSTAL STRUCTURES OF CAP-DNA WITH ALL BASE-PAIR SUBSTITUTIONS AT POSITION 6, CAP-[6A;17T]ICAP38 DNA organism=Escherichia coli DNA sequence DA(X9):DT(W9) DT(X8):DA(W8) DC(X7):DG(W7) DT(X6):DA(W6) DC(X5):DG(W5) DA(X4):DT(W4) DT(X3):DA(W3) DT(X2):DA(W2) DT(X1):DA(W1) DT(X-1):DA(W-1) DT(X-2):DA(W-2) DC(X-3):DG(W-3) DG(X-4):DC(W-4) DA(X-5):DT(W-5) DA(X-6):DT(W-6) DA(X-7):DT(W-7) DT(X-8):DA(W-8) chainA (172) SER179 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG180 0 0 0 2 11 17 0 0 0 0 0 0 0 0 0 0 0 (174) GLU181 0 5 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ARG185 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcSREtvgRilkmledqnlisahgktivvyg >1zre_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=4 CRYSTAL STRUCTURES OF CAP-DNA WITH ALL BASE-PAIR SUBSTITUTIONS AT POSITION 6, CAP-[6G;17C]ICAP38 DNA organism=Escherichia coli DNA sequence DA(X9):DT(W9) DT(X8):DA(W8) DC(X7):DG(W7) DC(X6):DG(W6) DC(X5):DG(W5) DA(X4):DT(W4) DT(X3):DA(W3) DT(X2):DA(W2) DT(X1):DA(W1) DT(X-1):DA(W-1) DT(X-2):DA(W-2) DC(X-3):DG(W-3) DG(X-4):DC(W-4) DA(X-5):DT(W-5) DA(X-6):DT(W-6) DA(X-7):DT(W-7) DT(X-8):DA(W-8) chainA (172) SER179 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG180 0 0 0 3 13 14 0 0 0 0 0 0 0 0 0 0 0 (174) GLU181 0 6 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ARG185 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcSREtvgRilkmledqnlisahgktivvyg >1zrf_B:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=4 CRYSTAL STRUCTURES OF CAP-DNA WITH ALL BASE-PAIR SUBSTITUTIONS AT POSITION 6, CAP-[6C;17G]ICAP38 DNA organism=Escherichia coli DNA sequence DA(Z9):DT(Y9) DT(Z8):DA(Y8) DC(Z7):DG(Y7) DG(Z6):DC(Y6) DC(Z5):DG(Y5) DA(Z4):DT(Y4) DT(Z3):DA(Y3) DT(Z2):DA(Y2) DT(Z1):DA(Y1) DT(Z-1):DA(Y-1) DT(Z-2):DA(Y-2) DC(Z-3):DG(Y-3) DG(Z-4):DC(Y-4) DA(Z-5):DT(Y-5) DA(Z-6):DT(Y-6) DA(Z-7):DT(Y-7) chainB (163) GLN170 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (172) SER179 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG180 0 0 0 2 11 11 0 0 0 0 0 0 0 0 0 0 (174) GLU181 0 5 9 5 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcSREtvgrilkmledqnlisahgktivvyg >1zs4_ACD: title=STRUCTURE OF BACTERIOPHAGE LAMBDA CII PROTEIN IN COMPLEX WITH DNA organism=Enterobacteria phage lambda DNA sequence DC(U3):DG(T26) DC(U4):DG(T25) DT(U5):DA(T24) DC(U6):DG(T23) DG(U7):DC(T22) DT(U8):DA(T21) DT(U9):DA(T20) DG(U10):DC(T19) DC(U11):DG(T18) DG(U12):DC(T17) DT(U13):DA(T16) DT(U14):DA(T15) DT(U15):DA(T14) DG(U16):DC(T13) DT(U17):DA(T12) DT(U18):DA(T11) DT(U19):DA(T10) DG(U20):DC(T9) DC(U21):DG(T8) DA(U22):DT(T7) DC(U23):DG(T6) DG(U24):DC(T5) DA(U25):DT(T4) DA(U26):DT(T3) DT(U27):DA(T2) chainA ( 37) ASP36 0 0 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS37 0 0 0 1 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER38 0 0 0 0 0 0 5 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN39 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER41 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG42 0 0 0 0 0 0 19 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 23) THR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 24) GLU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 33) ASP36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 2 0 0 0 0 0 0 ( 34) LYS37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 ( 35) SER38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 3 0 0 0 0 0 0 ( 36) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 ( 38) SER41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 ( 39) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 12 4 1 0 0 0 0 0 chainD prot.sequence gshmankrnealriesallnkiamlgtektaeavgvDKSQiSRwkrdwipkfsmllavlewgvvdddmarlarqvaailtnk/ankrnealriesallnkiamlgTEktaeavgvDKSQiSRwkrdwipkfsmllavlewgvvdddmarlarqvaailtnkk/rnealriesallnkiamlgtekTAeavgvdksQISRwKRdwipkfsmllavlewgvvdddmarlarqvaailt >1zs4_C:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF BACTERIOPHAGE LAMBDA CII PROTEIN IN COMPLEX WITH DNA organism=Enterobacteria phage lambda DNA sequence DA(T2):DT(U27) DT(T3):DA(U26) DT(T4):DA(U25) DC(T5):DG(U24) DG(T6):DC(U23) DT(T7):DA(U22) DG(T8):DC(U21) DC(T9):DG(U20) DA(T10):DT(U19) DA(T11):DT(U18) DA(T12):DT(U17) DC(T13):DG(U16) DA(T14):DT(U15) DA(T15):DT(U14) DA(T16):DT(U13) DC(T17):DG(U12) DG(T18):DC(U11) DC(T19):DG(U10) DA(T20):DT(U9) DA(T21):DT(U8) DC(T22):DG(U7) DG(T23):DC(U6) DA(T24):DT(U5) DG(T25):DC(U4) DG(T26):DC(U3) chainC ( 23) THR26 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLU27 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP36 0 0 0 0 0 0 2 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) LYS37 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER38 0 0 0 0 0 0 3 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER41 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG42 0 0 0 0 0 1 4 12 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ankrnealriesallnkiamlgTEktaeavgvDKSQiSRwkrdwipkfsmllavlewgvvdddmarlarqvaailtnkk >1ztt_A:DNA/RNA_polymerases; title=NETROPSIN BOUND TO D(CTTAATTCGAATTAAG) IN COMPLEX WITH MMLV RT CATALYTIC FRAGMENT organism=Moloney murine leukemia virus DNA sequence DG(G9):DC(B8) DA(G10):DT(B7) DA(G11):DT(B6) DT(G12):DA(B5) DT(G13):DA(B4) DA(G14):DT(B3) DA(G15):DT(B2) DG(G16):DC(B1) chainA ( 41) TYR64 0 0 0 0 0 0 0 5 ( 76) LEU99 0 0 0 0 0 0 0 14 ( 91) ASP114 0 0 0 0 0 0 0 11 ( 93) ARG116 0 0 0 0 0 4 6 7 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >1ztw_A:DNA/RNA_polymerases; title=D(CTTAATTCGAATTAAG) COMPLEXED WITH MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE CATALYTIC FRAGMENT organism=Moloney murine leukemia virus DNA sequence DC(B1):DG(G16) DT(B2):DA(G15) DT(B3):DA(G14) DA(B4):DT(G13) DA(B5):DT(G12) DT(B6):DA(G11) DT(B7):DA(G10) DC(B8):DG(G9) chainA ( 41) TYR64 1 0 0 0 0 0 0 0 ( 76) LEU99 23 0 0 0 0 0 0 0 ( 91) ASP114 13 0 0 0 0 0 0 0 ( 93) ARG116 7 8 3 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >1zvv_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF A CCPA-CRH-DNA COMPLEX organism=BACILLUS SUBTILIS DNA sequence DC(O700) DT(O701) DG(O702) DA(O703) DA(O704) DA(O705) DG(O706) DC(O707) DG(O708) DC(O709) DT(O710) DT(O711) DA(O712) DC(O713) DA(O714) DG(O715) chainA ( 15) SER15 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ALA17 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG21 0 26 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) LEU55 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 ( 56) ALA56 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence mnvtiydvareasvSmAtvsRvvngnpnvkpstrkkvletierlgyrpnavargLAskktttvgviipdisnifyaelargiediasmykyniilsnsdqnqdkqlhllnnmlgkqvdgiifmsgnvteehveelkkspvpvvlaasiestnqipsvtidyeqaafdavqslidsghkniafvsgtleepinhakkvkgykraltesglpvrdsyivegdytydsgieaveklleedekptaifvgtdemalgvihgaqdrglnvpndleiigfdntrlstmvrpqltsvvqpmydigavamrlltkymnketvdssivelphriefrqstk >1zx4_A:KorB_DNA-binding_domain-like; title=STRUCTURE OF PARB BOUND TO DNA organism=Enterobacteria phage P1 DNA sequence DC(S3):DG(T38) DG(S4):DC(T37) DT(S5):DA(T36) DG(S6):DC(T35) DG(S7):DC(T34) DC(S8):DG(T33) DG(S9):DC(T32) DA(S10):DT(T31) DT(S11):DA(T30) DT(S12):DA(T29) DT(S13):DA(T28) DC(S14):DG(T27) DA(S15):DT(T26) DC(S16):DG(T25) DC(S17):DG(T24) DT(S18):DA(T23) DT(S19):DA(T22) DG(S20):DC(T21) DA(S21):DT(T20) DA(S22):DT(T19) DA(S23):DT(T18) DT(S24):DA(T17) DC(S25):DG(T16) DG(S26):DC(T15) DC(S27):DG(T14) chainA ( 33) SER178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 34) GLN179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 35) ALA180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 0 0 0 ( 38) THR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 ( 39) ARG184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 14 7 0 0 0 0 0 0 prot.sequence alqhsireiglrlmrmkndgmsqkdiaakeglSQAkvTRalqaasapeelvalfpvqseltfsdyktlcavgdemgnknlefdqliqnispeindilsiemaedevknkilrlitkeaslltdkgskdksvvtelwkfedkdrfarkrvkgrafsyefnrlskelqeeldrmighilrks >1zyq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=T7 DNA POLYMERASE IN COMPLEX WITH 8OG AND INCOMING DDATP organism=ENTEROBACTERIA PHAGE T7 DNA sequence DT(T2006):DA(P1021) DG(T2007):DC(P1020) DG(T2008):DC(P1019) DC(T2009):DG(P1018) DA(T2010):DT(P1017) DC(T2011):DG(P1016) DT(T2012):DA(P1015) DG(T2013):DC(P1014) DG(T2014):DC(P1013) DC(T2015):DG(P1012) DC(T2016):DG(P1011) DG(T2017):DC(P1010) chainA (114) LYS114 0 0 0 0 0 0 0 2 0 0 0 0 (370) LYS394 0 0 5 1 0 0 0 0 0 0 0 0 (405) ARG429 1 0 0 0 0 0 0 0 0 0 0 0 (412) ASN436 0 1 0 0 0 0 0 0 0 0 0 0 (415) GLN439 0 8 6 0 0 0 0 0 0 0 0 0 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgKlpgaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggldtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflygagdeaigqivgagkergkelkkkflentpaiaalresiqqtlvessqwvageqqvkwkrrwikgldgrkvhvrsphaalNtllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >1zzi_A:Eukaryotic_type_KH-domain_KH-domain_type_I; title=CRYSTAL STRUCTURE ANALYSIS OF THE THIRD KH DOMAIN OF HNRNP K IN COMPLEX WITH SSDNA organism=Homo sapiens DNA sequence DC(C1) DT(C2) DC(C3) DC(C4) DC(C5) DC(C6) chainA ( 18) ALA25 0 0 1 0 0 0 ( 20) SER27 0 3 0 0 0 0 ( 22) ILE29 0 0 6 5 0 0 ( 29) ILE36 0 0 0 5 0 0 ( 33) ARG40 0 0 0 8 2 0 ( 41) LYS48 0 0 0 0 3 0 ( 42) ILE49 0 0 0 2 0 0 ( 44) GLU51 8 0 1 0 0 0 ( 52) ARG59 0 0 11 1 0 0 ( 77) TYR84 0 7 0 0 0 0 ( 78) SER85 0 10 0 0 0 0 prot.sequence gamgpiittqvtipkdlAgSiIgkggqrIkqiRhesgasiKIdEplegsedRiititgtqdqiqnaqyllqnsvkqYSgkff >2a07_IK:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FOXP2 BOUND SPECIFICALLY TO DNA. organism=Homo sapiens DNA sequence DC(C3):DG(D21) DT(C4):DA(D20) DA(C5):DT(D19) DT(C6):DA(D18) DG(C7):DC(D17) DA(C8):DT(D16) DA(C9):DT(D15) DA(C10):DT(D14) DC(C11):DG(D13) DA(C12):DT(D12) DA(C13):DT(D11) DA(C14):DT(D10) DT(C15):DA(D9) DT(C16):DA(D8) DT(C17):DA(D7) DT(C18):DA(D6) DC(C19):DG(D5) DC(C20):DG(D4) DT(C21):DA(D3) chainI ( 48) ASN550 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 ( 52) HIS554 0 0 0 0 0 0 2 12 1 0 0 0 0 0 0 0 0 0 0 chainK ( 49) ASN550 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 ( 52) ARG553 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 ( 53) HIS554 0 0 0 0 0 0 0 0 11 8 8 0 0 0 0 0 0 0 0 ( 56) SER557 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 ( 57) LEU558 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence vrppftyatlirqaimessdrqltlneiyswftrtfayfrrnaatwkNavrHnlslhkcfvrvenvkgavwtvdeveyqkr/ivrppftyatlirqaimessdrqltlneiyswftrtfayfrrnaatwkNavRHnlSLhkcfvrvenvkgavwtvdeveyqkrr >2a07_J:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FOXP2 BOUND SPECIFICALLY TO DNA. organism=Homo sapiens DNA sequence DA(B3):DT(A21) DG(B4):DC(A20) DG(B5):DC(A19) DA(B6):DT(A18) DA(B7):DT(A17) DA(B8):DT(A16) DA(B9):DT(A15) DT(B10):DA(A14) DT(B11):DA(A13) DT(B12):DA(A12) DG(B13):DC(A11) DT(B14):DA(A10) DT(B15):DA(A9) DT(B16):DA(A8) DC(B17):DG(A7) DA(B18):DT(A6) DT(B19):DA(A5) DA(B20):DT(A4) DG(B21):DC(A3) chainJ ( 49) ASN550 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 ( 52) ARG553 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 53) HIS554 0 0 0 0 0 0 0 0 7 8 11 0 0 0 0 0 0 0 0 ( 56) SER557 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 ( 57) LEU558 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence ivrppftyatlirqaimessdrqltlneiyswftrtfayfrrnaatwkNavRHnlSLhkcfvrvenvkgavwtvdeveyqkrr >2a3v_AB:DNA_breaking-rejoining_enzymes; title=STRUCTURAL BASIS FOR BROAD DNA-SPECIFICITY IN INTEGRON RECOMBINATION organism=Vibrio cholerae O1 biovar eltor str. N16961 DNA sequence DC(E5):DG(F39) DC(E6):DG(F38) DG(E7):DC(F37) DG(E8):DC(F36) DT(E9):DA(F35) DT(E10):DA(F34) DA(E11):DT(F33) DT(E12):DA(F32) DA(E13):DT(F31) DA(E14):DT(F30) DC(E15):DG(F29) DG(E16):DT(F28) DC(E17):DT(F27) DC(E18):DT(F26) DC(E19):DG(F25) DG(E20):DC(F24) DC(E21):DG(F23) DC(E22):DG(F22) DT(E23):DA(F21) DA(E24):DT(F19) DA(E25):DT(F18) DG(E26):DC(F17) DG(E27):DC(F15) DG(E28):DC(F14) DG(E29):DC(F13) DC(E30):DG(F11) DT(E31):DA(F10) DG(E32):DC(F9) DA(E33):DA(F8) DC(E34):DG(F7) DA(E35):DT(F6) chainA ( 20) LYS21 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) THR22 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) TYR26 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) TRP29 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR65 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS66 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR67 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) GLN68 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) SER69 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) LEU70 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LEU72 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASN73 0 0 0 0 0 0 0 0 0 4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) SER76 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) LEU87 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) LEU89 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ILE91 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) PHE93 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) SER96 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) LYS160 0 0 0 0 0 0 0 0 4 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) GLN248 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) ASP295 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) LYS297 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) THR298 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) LYS21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 ( 22) THR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ALA25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 26) TYR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) HIS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 ( 29) TRP29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 ( 66) LYS66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 ( 70) LEU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 5 0 0 0 0 0 0 0 0 0 0 0 ( 73) ASN73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ARG100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ASN243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 (245) THR245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (248) GLN248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (249) LYS249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 prot.sequence gsqfllsvrefmqtryyakKTieaYlhWitryihfhnkkhpslmgdkeveefltylavqgkvaTKTQSLaLNslSflykeilktpLsLeIrFqRSqlerklpvvltrdeirrlleivdpkhqlpikllygsglrlmecmrlrvqdidfdygairiwqgKggknrtvtlakelyphlkeqialakryydrdlhqknyggvwlptalkekypnapyefrwhylfpsfqlsldpesdvmrrhhmnetvlQkavrrsaqeagiektvtchtlrhsfathllevgadirtvqeqlghtDvKTtqiythsgvlsplsrl/mgsqfllsvrefmqtryyakKTieAYlHWitryihfhnkkhpslmgdkeveefltylavqgkvatKTqsLalNslsflykeilktplsleirfqrsqleRklpvvltrdeirrlleivdpkhqlpikllygsglrlmecmrlrvqdidfdygairiwqgkggknrtvtlakelyphlkeqialakryydrdlhqknyggvwlptalkekypnapyefrwhylfpsfqlsldpesdvmrrhhmNeTvlQKavrrsaqeagiektvtchtlrhsfathllevgadirtvqeqlghtdvkttqiythvldrgasgvlsplsrl >2a3v_C:DNA_breaking-rejoining_enzymes; title=STRUCTURAL BASIS FOR BROAD DNA-SPECIFICITY IN INTEGRON RECOMBINATION organism=Vibrio cholerae O1 biovar eltor str. N16961 DNA sequence DG(H7):DC(G34) DA(H8):DA(G33) DC(H9):DG(G32) DA(H10):DT(G31) DG(H11):DC(G30) DC(H13):DG(G29) DC(H14):DG(G28) DC(H15):DG(G27) DC(H17):DG(G26) DT(H18):DA(G25) DT(H19):DA(G24) DA(H21):DT(G23) DG(H22):DC(G22) DG(H23):DC(G21) DC(H24):DG(G20) DG(H25):DC(G19) DT(H26):DC(G18) DT(H27):DC(G17) DT(H28):DG(G16) DG(H29):DC(G15) DT(H30):DA(G14) DT(H31):DA(G13) DA(H32):DT(G12) DT(H33):DA(G11) DA(H34):DT(G10) DA(H35):DT(G9) DC(H36):DG(G8) DC(H37):DG(G7) DG(H38):DC(G6) chainC ( 21) LYS21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 ( 22) THR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 25) ALA25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 26) TYR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 ( 29) TRP29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 65) THR65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 ( 66) LYS66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 ( 67) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 ( 68) GLN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 ( 70) LEU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 ( 72) LEU72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 ( 73) ASN73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 ( 76) SER76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 87) LEU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 89) LEU89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 ( 91) ILE91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 ( 93) PHE93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 95) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 ( 96) SER96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (160) LYS160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 (248) GLN248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (295) ASP295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (297) LYS297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 (298) THR298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 (301) ILE301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mgsqfllsvrefmqtryyakKTieAYlhWitryihfhnkkhpslmgdkeveefltylavqgkvaTKTQSLaLNslSflykeilktpLsLeIrFqRSqlerklpvvltrdeirrlleivdpkhqlpikllygsglrlmecmrlrvqdidfdygairiwqgKggknrtvtlakelyphlkeqialakryydrdlhqknyggvwlptalkekypnapyefrwhylfpsfqlsldpesdvmrrhhmnetvlQkavrrsaqeagiektvtchtlrhsfathllevgadirtvqeqlghtDvKTtqIythrgasgvlsplsrl >2a3v_CD:DNA_breaking-rejoining_enzymes; title=STRUCTURAL BASIS FOR BROAD DNA-SPECIFICITY IN INTEGRON RECOMBINATION organism=Vibrio cholerae O1 biovar eltor str. N16961 DNA sequence DG(H7):DC(G34) DA(H8):DA(G33) DC(H9):DG(G32) DA(H10):DT(G31) DG(H11):DC(G30) DC(H13):DG(G29) DC(H14):DG(G28) DC(H15):DG(G27) DC(H17):DG(G26) DT(H18):DA(G25) DT(H19):DA(G24) DA(H21):DT(G23) DG(H22):DC(G22) DG(H23):DC(G21) DC(H24):DG(G20) DG(H25):DC(G19) DT(H26):DC(G18) DT(H27):DC(G17) DT(H28):DG(G16) DG(H29):DC(G15) DT(H30):DA(G14) DT(H31):DA(G13) DA(H32):DT(G12) DT(H33):DA(G11) DA(H34):DT(G10) DA(H35):DT(G9) DC(H36):DG(G8) DC(H37):DG(G7) DG(H38):DC(G6) chainC ( 21) LYS21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 ( 22) THR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 25) ALA25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 26) TYR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 ( 29) TRP29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 65) THR65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 ( 66) LYS66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 ( 67) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 ( 68) GLN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 ( 70) LEU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 ( 72) LEU72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 ( 73) ASN73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 ( 76) SER76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 87) LEU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 89) LEU89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 ( 91) ILE91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 ( 93) PHE93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 95) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 ( 96) SER96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (160) LYS160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 (248) GLN248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (295) ASP295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (297) LYS297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 (298) THR298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 (301) ILE301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainD ( 21) LYS21 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR22 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ALA25 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) TYR26 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) HIS28 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) TRP29 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) LYS66 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR67 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LEU70 0 0 0 0 0 0 0 0 0 0 5 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ASN73 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ARG100 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ASN243 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) THR245 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) GLN248 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) LYS249 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mgsqfllsvrefmqtryyakKTieAYlhWitryihfhnkkhpslmgdkeveefltylavqgkvaTKTQSLaLNslSflykeilktpLsLeIrFqRSqlerklpvvltrdeirrlleivdpkhqlpikllygsglrlmecmrlrvqdidfdygairiwqgKggknrtvtlakelyphlkeqialakryydrdlhqknyggvwlptalkekypnapyefrwhylfpsfqlsldpesdvmrrhhmnetvlQkavrrsaqeagiektvtchtlrhsfathllevgadirtvqeqlghtDvKTtqIythrgasgvlsplsrl/mgsqfllsvrefmqtryyakKTiEAYlHWitryihfhnkkhpslmgdkeveefltylavqgkvatKTqsLalNslsflykeilktplsleirfqrsqleRklpvvltrdeirrlleivdpkhqlpikllygsglrlmecmrlrvqdidfdygairiwqgkggknrtvtlakelyphlkeqialakryydrdlhqknyggvwlptalkekypnapyefrwhylfpsfqlsldpesdvmrrhhmNeTvlQKavrrsaqeagiektvtchtlrhsfathllevgadirtvqeqlghtdvkttqiythvldrgasgvlsplsrl >2a66_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=HUMAN LIVER RECEPTOR HOMOLOGUE DNA-BINDING DOMAIN (HLRH-1 DBD) IN COMPLEX WITH DSDNA FROM THE HCYP7A1 PROMOTER organism=Homo sapiens DNA sequence DG(B201):DC(C312) DT(B202):DA(C311) DT(B203):DA(C310) DC(B204):DG(C309) DA(B205):DT(C308) DA(B206):DT(C307) DG(B207):DC(C306) DG(B208):DC(C305) DC(B209):DG(C304) DC(B210):DG(C303) DA(B211):DT(C302) DG(B212):DC(C301) chainA ( 21) GLU104 0 0 0 0 0 0 1 8 2 0 0 0 ( 24) LYS107 0 0 0 0 0 2 6 1 0 0 0 0 ( 28) LYS111 0 0 0 0 0 0 5 6 1 0 0 0 ( 29) ARG112 0 0 0 0 0 0 0 0 0 7 11 0 ( 79) ARG162 0 0 0 0 3 7 6 0 0 0 0 0 ( 82) ARG165 0 0 4 9 6 0 0 0 0 0 0 0 prot.sequence elcpvcgdkvsgyhyglltcEscKgffKRtvqnnkrytcienqncqidktqrkrcpycrfqkclsvgmkleavradrmRggRnkfgpmykrdral >2ac0_AC: title=STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX I) organism=Homo sapiens DNA sequence DC(G1):DG(H12) DG(G2):DC(H11) DG(G3):DC(H10) DG(G4):DC(H9) DC(G5):DG(H8) DA(G6):DT(H7) DT(G7):DA(H6) DG(G8):DC(H5) DC(G9):DG(H4) DC(G10):DG(H3) DC(G11):DG(H2) DG(G12):DC(H1) DC(E1):DG(F12) DG(E2):DC(F11) DG(E3):DC(F10) DG(E4):DC(F9) DC(E5):DG(F8) DA(E6):DT(F7) DT(E7):DA(F6) DG(E8):DC(F5) DC(E9):DG(F4) DC(E10):DG(F3) chainA ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 ( 28) SER121 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 30) THR123 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 16 0 0 0 0 chainC ( 25) LYS120 0 0 0 0 0 0 0 0 8 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 26) SER121 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 (181) ALA276 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 0 0 13 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKSvTctyspalnkmfcqlaKtcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk/svpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlr >2ac0_D:p53-like_transcription_factors; title=STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX I) organism=Homo sapiens DNA sequence DC(H1):DG(G12) DG(H2):DC(G11) DG(H3):DC(G10) DG(H4):DC(G9) DC(H5):DG(G8) DA(H6):DT(G7) DT(H7):DA(G6) DG(H8):DC(G5) DC(H9):DG(G4) DC(H10):DG(G3) DC(H11):DG(G2) DG(H12):DC(G1) chainD ( 25) LYS120 0 0 0 0 0 0 0 0 8 9 7 0 (181) ALA276 0 0 0 0 0 0 0 1 1 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 3 0 0 0 (185) ARG280 0 0 0 0 0 0 14 12 4 0 0 0 prot.sequence svpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkkg >2acj_BCD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE B/Z JUNCTION CONTAINING DNA BOUND TO Z-DNA BINDING PROTEINS organism=Homo sapiens DNA sequence DC(E3):DG(F34) DG(E4):DC(F33) DC(E5):DG(F32) DG(E6):DC(F31) DC(E7):DG(F30) DG(E8):DC(F29) DC(E9):DG(F28) DC(E10):DG(F27) DT(E12):DA(F25) DA(E13):DT(F24) DA(E14):DT(F23) DA(E15):DT(F22) DC(E16):DG(F21) DC(E17):DG(F20) chainB ( 37) ARG174 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 40) TYR177 0 0 0 0 0 17 0 0 0 0 0 0 0 0 chainC ( 41) TYR177 0 0 19 0 0 0 0 0 0 0 0 0 0 0 chainD ( 41) TYR177 0 0 0 0 0 0 17 0 0 0 0 0 0 0 prot.sequence hmeqrilkfleelgegkattahdlsgklgtpkkeinRvlYslakkgklqkeagtpplwkiavstq/shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkiavstq/shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkiav >2acj_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE B/Z JUNCTION CONTAINING DNA BOUND TO Z-DNA BINDING PROTEINS organism=Homo sapiens DNA sequence DG(F20):DC(E17) DG(F21):DC(E16) DT(F22):DA(E15) DT(F23):DA(E14) DT(F24):DA(E13) DA(F25):DT(E12) DG(F27):DC(E10) DG(F28):DC(E9) DC(F29):DG(E8) DG(F30):DC(E7) DC(F31):DG(E6) DG(F32):DC(E5) DC(F33):DG(E4) DG(F34):DC(E3) chainC ( 41) TYR177 0 0 0 0 0 0 0 0 0 0 0 19 0 0 prot.sequence shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkiavstq >2ady_AB: title=STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX IV) organism=Homo sapiens DNA sequence DG(F2):DC(E11) DG(F3):DC(E10) DA(F4):DT(E9) DC(F5):DG(E8) DA(F6):DT(E7) DT(F7):DA(E6) DG(F8):DC(E5) DT(F9):DA(E4) DC(F10):DG(E3) DC(F11):DG(E2) DG(F12):DC(E1) chainA ( 26) LYS120 0 0 0 0 0 0 0 5 5 2 0 ( 27) SER121 0 0 0 0 0 0 0 0 0 0 2 (182) ALA276 0 0 0 0 0 0 0 1 0 0 0 (183) CYS277 0 0 0 0 0 0 0 2 0 0 0 (186) ARG280 0 0 0 0 0 14 14 0 0 0 0 chainB ( 27) LYS120 5 11 6 0 0 0 0 0 0 0 0 ( 28) SER121 1 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 1 1 0 0 0 0 0 0 0 (184) CYS277 0 0 2 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 10 13 0 0 0 0 0 0 prot.sequence ssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk/sssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk >2ady_B:p53-like_transcription_factors; title=STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX IV) organism=Homo sapiens DNA sequence DG(F2):DC(E11) DG(F3):DC(E10) DA(F4):DT(E9) DC(F5):DG(E8) DA(F6):DT(E7) DT(F7):DA(E6) DG(F8):DC(E5) DT(F9):DA(E4) DC(F10):DG(E3) DC(F11):DG(E2) DG(F12):DC(E1) chainB ( 27) LYS120 5 11 6 0 0 0 0 0 0 0 0 ( 28) SER121 1 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 1 1 0 0 0 0 0 0 0 (184) CYS277 0 0 2 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 10 13 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk >2ago_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=FIDELITY OF DPO4: EFFECT OF METAL IONS, NUCLEOTIDE SELECTION AND PYROPHOSPHOROLYSIS organism=Sulfolobus solfataricus DNA sequence DT(C1905):DG(B1814) DG(C1906):DC(B1813) DA(C1907):DT(B1812) DA(C1908):DT(B1811) DT(C1909):DA(B1810) DC(C1910):DG(B1809) DC(C1911):DG(B1808) DT(C1912):DA(B1807) DT(C1913):DA(B1806) DC(C1914):DG(B1805) DC(C1915):DG(B1804) DC(C1916):DG(B1803) DC(C1917):DG(B1802) DC(C1918):DG(B1801) chainA ( 42) ALA42 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) SER244 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (297) SER297 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (332) ARG332 3 6 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 0 5 2 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivSrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >2agp_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=FIDELITY OF DPO4: EFFECT OF METAL IONS, NUCLEOTIDE SELECTION AND PYROPHOSPHOROLYSIS organism=Sulfolobus solfataricus DNA sequence DA(F1907):DT(E1812) DA(F1908):DT(E1811) DT(F1909):DA(E1810) DC(F1910):DG(E1809) DC(F1911):DG(E1808) DT(F1912):DA(E1807) DT(F1913):DA(E1806) DC(F1914):DG(E1805) DC(F1915):DG(E1804) DC(F1916):DG(E1803) DC(F1917):DG(E1802) DC(F1918):DG(E1801) chainB (244) SER244 0 0 1 0 0 0 0 0 0 0 0 0 (295) ILE295 0 1 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 6 2 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldIvsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2agq_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=FIDELITY OF DPO4: EFFECT OF METAL IONS, NUCLEOTIDE SELECTION AND PYROPHOSPHOROLYSIS organism=Sulfolobus solfataricus DNA sequence DA(C6):DT(B12) DG(C7):DC(B11) DT(C8):DA(B10) DC(C9):DG(B9) DC(C10):DG(B8) DT(C11):DA(B7) DG(C12):DC(B6) DT(C13):DA(B5) DA(C14):DT(B4) DG(C15):DC(B3) DC(C16):DG(B2) DC(C17):DG(B1) chainA (244) SER244 0 0 1 0 0 0 0 0 0 0 0 0 (336) ARG336 0 2 1 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2ahi_A:p53-like_transcription_factors; title=STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX III) organism=Homo sapiens DNA sequence DC(E1):DG(F12) DG(E2):DC(F11) DG(E3):DC(F10) DA(E4):DT(F9) DC(E5):DG(F8) DA(E6):DT(F7) DT(E7):DA(F6) DG(E8):DC(F5) DT(E9):DA(F4) DC(E10):DG(F3) chainA ( 26) LYS120 0 0 6 3 0 0 0 0 0 0 ( 27) SER121 0 5 0 0 0 0 0 0 0 0 (182) ALA276 0 0 0 1 1 0 0 0 0 0 (186) ARG280 0 0 0 0 12 16 0 0 0 0 prot.sequence ssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcQlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkk >2ahi_AB: title=STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX III) organism=Homo sapiens DNA sequence DC(E1):DG(F12) DG(E2):DC(F11) DG(E3):DC(F10) DA(E4):DT(F9) DC(E5):DG(F8) DA(E6):DT(F7) DT(E7):DA(F6) DG(E8):DC(F5) DT(E9):DA(F4) DC(E10):DG(F3) chainA ( 26) LYS120 0 0 6 3 0 0 0 0 0 0 ( 27) SER121 0 5 0 0 0 0 0 0 0 0 (182) ALA276 0 0 0 1 1 0 0 0 0 0 (186) ARG280 0 0 0 0 12 16 0 0 0 0 chainB (183) ALA276 0 0 0 0 0 0 0 1 1 0 (184) CYS277 0 0 0 0 0 0 0 0 2 0 (187) ARG280 0 0 0 0 0 0 13 11 0 0 prot.sequence ssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcQlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkk/sssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk >2ajq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF REPLICATIVE DNA POLYMERASE PROVIDES INSIGTS INTO THE MECHANISMS FOR PROCESSIVITY, FRAMESHIFTING AND EDITING organism=ENTEROBACTERIA PHAGE T7 DNA sequence DA(T855):2DT(P822) DT(T856):DA(P821) DG(T857):DC(P820) DG(T858):DC(P819) DC(T859):DG(P818) DA(T860):DT(P817) DC(T861):DG(P816) DT(T862):DA(P815) DG(T863):DC(P814) DG(T864):DC(P813) DC(T865):DG(P812) DC(T866):DG(P811) DG(T867):DC(P810) DT(T868):DA(P809) DC(T869):DG(P808) DG(T870):DC(P807) DT(T871):DA(P806) DT(T872):DA(P805) DT(T873):DA(P804) chainA (268) LYS268 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (394) LYS394 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) ARG429 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (436) ASN436 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) GLN439 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (615) GLN615 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivsaiaanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgkrfgshaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpKggtemfchprtgkplpkypriktpkvggifkkpknkaqregrepceldtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflygagdekigqivgagkergkelkkkflentpaiaalresiqqtlvessqwvageqqvkwkrrwikgldgrkvhvrsphaalntllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >2alz_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF HPOLI WITH DNA AND DCTP organism=Homo sapiens DNA sequence DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainA (277) SER301 0 0 1 0 0 0 (281) GLU305 2 0 0 0 0 0 (319) ARG343 0 0 0 0 1 0 (337) GLN361 0 0 0 0 0 1 prot.sequence assrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqSfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssekhygresrQcpipshviqvmtpmvdilmklfrnmtllsvcfcnlk >2aoq_A:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF MUTH-UNMETHYLATED DNA COMPLEX organism=HAEMOPHILUS INFLUENZAE DNA sequence DG(B1):DC(C12) DC(B2):DG(C11) DA(B3):DT(C10) DT(B4):DA(C9) DG(B5):DC(C8) DA(B6):DT(C7) DT(B7):DA(C6) DC(B8):DG(C5) DA(B9):DT(C4) DT(B10):DA(C3) DG(B11):DC(C2) DC(B12):DG(C1) chainA ( 40) LYS48 0 0 0 0 0 8 10 9 0 0 0 0 ( 57) SER65 0 0 0 0 0 0 0 0 0 3 3 0 ( 83) GLU91 0 0 0 0 10 10 0 0 0 0 0 0 ( 84) THR92 0 0 0 1 0 1 0 0 0 0 0 0 ( 86) PHE94 0 0 0 0 0 0 3 0 2 0 0 0 ( 89) LEU97 0 0 0 0 0 0 0 0 0 2 0 0 (121) ARG129 0 0 0 7 2 0 0 0 0 0 0 0 (174) GLN182 0 0 0 1 0 0 0 0 0 0 0 0 (176) ARG184 0 0 0 11 17 3 0 0 0 0 0 0 (177) PRO185 0 0 0 0 2 5 1 0 0 0 0 0 (178) LYS186 0 0 0 0 0 0 10 8 5 0 0 0 (204) TYR212 0 0 0 0 0 2 6 0 0 0 0 0 prot.sequence mipqtleqllsqaqsiagltfgeladelhipvpidlkrdKgwvgmlleralgatagSkaeqdfshlgvelktlpinaegyplETtFvsLaplvqnsgvkwenshvrhklscvlwmpiegsRhiplrerhigapifwkptaeqerqlkqdweelmdlivlgkldqitarigevmQlRPKgansravtkgigkngeiidtlplgfYlrKeftaqilnaflet >2aor_A:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF MUTH-HEMIMETHYLATED DNA COMPLEX organism=Haemophilus influenzae DNA sequence DC(C1):DG(D22) DA(C2):DT(D21) DG(C3):DC(D20) DG(C4):DC(D19) 6MA(C5):DT(D18) DT(C6):DA(D17) DC(C7):DG(D16) DC(C8):DG(D15) DA(C9):DT(D14) DA(C10):DT(D13) DG(C11):DC(D12) DC(C12):DG(D11) DT(C13):DA(D10) DT(C14):DA(D9) DG(C15):DC(D8) DG(C16):DC(D7) DA(C17):DT(D6) DT(C18):6MA(D5) DC(C19):DG(D4) DC(C20):DG(D3) DT(C21):DA(D2) DG(C22):DC(D1) chainA ( 40) LYS48 0 0 0 0 8 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) MET53 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) LYS66 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 83) GLU91 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) PHE94 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ARG184 0 0 6 16 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) PRO185 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) LYS186 0 0 0 0 0 12 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) TYR212 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mipqtleqllsqaqsiagltfgeladelhipvpidlkrdKgwvgMlleralgatagsKaeqdfshlgvelktlpinaegyplEttFvslaplvqnsgvkwenshvrhklscvlwmpiegsrhiplrerhigapifwkptaeqerqlkqdweelmdlivlgkldqitarigevmqlRPKgansravtkgigkngeiidtlplgfYlrkeftaqilnaflet >2aor_AB:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF MUTH-HEMIMETHYLATED DNA COMPLEX organism=Haemophilus influenzae DNA sequence DC(C1):DG(D22) DA(C2):DT(D21) DG(C3):DC(D20) DG(C4):DC(D19) 6MA(C5):DT(D18) DT(C6):DA(D17) DC(C7):DG(D16) DC(C8):DG(D15) DA(C9):DT(D14) DA(C10):DT(D13) DG(C11):DC(D12) DC(C12):DG(D11) DT(C13):DA(D10) DT(C14):DA(D9) DG(C15):DC(D8) DG(C16):DC(D7) DA(C17):DT(D6) DT(C18):6MA(D5) DC(C19):DG(D4) DC(C20):DG(D3) DT(C21):DA(D2) DG(C22):DC(D1) chainA ( 40) LYS48 0 0 0 0 8 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) MET53 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) LYS66 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 83) GLU91 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) PHE94 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ARG184 0 0 6 16 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) PRO185 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) LYS186 0 0 0 0 0 12 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) TYR212 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 40) LYS48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 8 0 0 0 0 ( 45) MET53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 58) LYS66 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 83) GLU91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 ( 86) PHE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (176) ARG184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 17 5 0 0 (177) PRO185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 4 0 0 0 (178) LYS186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 11 0 0 0 0 0 (204) TYR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 prot.sequence mipqtleqllsqaqsiagltfgeladelhipvpidlkrdKgwvgMlleralgatagsKaeqdfshlgvelktlpinaegyplEttFvslaplvqnsgvkwenshvrhklscvlwmpiegsrhiplrerhigapifwkptaeqerqlkqdweelmdlivlgkldqitarigevmqlRPKgansravtkgigkngeiidtlplgfYlrkeftaqilnaflet/mipqtleqllsqaqsiagltfgeladelhipvpidlkrdKgwvgMlleralgatagsKaeqdfshlgvelktlpinaegyplEttFvslaplvqnsgvkwenshvrhklscvlwmpiegsrhiplrerhigapifwkptaeqerqlkqdweelmdlivlgkldqitarigevmqlRPKgansravtkgigkngeiidtlplgfYlrkeftaqilnafletk >2aq4_A:DNA/RNA_polymerases; title=TERNARY COMPLEX OF THE CATALYTIC CORE OF REV1 WITH DNA AND DCTP. organism=Saccharomyces cerevisiae DNA sequence DA(P1):DT(T16) DT(P2):DA(T15) DC(P3):DG(T14) DC(P4):DG(T13) DT(P5):DA(T12) DC(P6):DG(T11) DC(P7):DG(T10) DC(P8):DG(T9) DC(P9):DG(T8) DT(P10):DA(T7) DA(P11):DT(T6) chainA ( 25) SER329 0 0 0 0 0 0 0 0 0 0 1 (316) ASP626 0 0 0 0 0 0 0 0 0 0 9 prot.sequence krivacddpdfltsyfahsrlhhlSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdtlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfsrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdv >2as5_N:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF THE DNA BINDING DOMAINS OF NFAT AND FOXP2 BOUND SPECIFICALLY TO DNA. organism=HOMO SAPIENS DNA sequence DC(B5003):DG(A4021) DT(B5004):DA(A4020) DA(B5005):DT(A4019) DT(B5006):DA(A4018) DG(B5007):DC(A4017) DA(B5008):DT(A4016) DA(B5009):DT(A4015) DA(B5010):DT(A4014) DC(B5011):DG(A4013) DA(B5012):DT(A4012) DA(B5013):DT(A4011) DA(B5014):DT(A4010) DT(B5015):DA(A4009) DT(B5016):DA(A4008) DT(B5017):DA(A4007) DT(B5018):DA(A4006) DC(B5019):DG(A4005) DC(B5020):DG(A4004) DT(B5021):DA(A4003) chainN ( 30) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 5 0 ( 33) TYR424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 ( 35) THR426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 36) GLU427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 ( 39) ARG430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 5 (180) GLN571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 4 0 0 (181) ARG572 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 prot.sequence aslpplewplssqsgsyelrievqpkphhRahYeTEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigrkntrvrlvfrvhipessgrivslqtasnpiecsQRsahelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv >2asd_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=OXOG-MODIFIED INSERTION TERNARY COMPLEX organism=Sulfolobus solfataricus DNA sequence DG(D801):DC(E919) DG(D802):DC(E918) DT(D803):DA(E917) DT(D804):DA(E916) DG(D805):DC(E915) DG(D806):DC(E914) DA(D807):DT(E913) DT(D808):DA(E912) DG(D809):DC(E911) DG(D810):DC(E910) DT(D811):DA(E909) DA(D812):DT(E908) chainA (297) SER297 0 0 0 0 0 0 0 2 0 0 0 0 (336) ARG336 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeaKakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivSrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2asj_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=OXOG-MODIFIED PREINSERTION BINARY COMPLEX organism=Sulfolobus solfataricus DNA sequence DC(E907):DDG(D813) DT(E908):DA(D812) DA(E909):DT(D811) DC(E910):DG(D810) DC(E911):DG(D809) DA(E912):DT(D808) DT(E913):DA(D807) DC(E914):DG(D806) DC(E915):DG(D805) DA(E916):DT(D804) DA(E917):DT(D803) DC(E918):DG(D802) DC(E919):DG(D801) chainA ( 32) VAL32 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA44 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 4 0 0 0 0 0 0 0 0 0 0 0 0 (295) ILE295 0 0 0 0 0 2 0 0 0 0 0 0 0 (297) SER297 0 0 0 0 0 0 1 0 0 0 0 0 0 (336) ARG336 0 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldIvSrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2ata_D:p53-like_transcription_factors; title=STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX II) organism=Homo sapiens DNA sequence DA(H1):DT(G12) DA(H2):DT(G11) DG(H3):DC(G10) DG(H4):DC(G9) DC(H5):DG(G8) DA(H6):DT(G7) DT(H7):DA(G6) DG(H8):DC(G5) DC(H9):DG(G4) DC(H10):DG(G3) DT(H11):DA(G2) chainD ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 2 (183) ALA276 0 0 0 0 0 0 0 1 1 0 0 (184) CYS277 0 0 0 0 0 0 0 0 3 0 0 (187) ARG280 0 0 0 0 0 0 14 11 2 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlr >2atl_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=UNMODIFIED INSERTION TERNARY COMPLEX organism=Sulfolobus solfataricus DNA sequence DG(H1801):DC(J1919) DG(H1802):DC(J1918) DT(H1803):DA(J1917) DT(H1804):DA(J1916) DG(H1805):DC(J1915) DG(H1806):DC(J1914) DA(H1807):DT(J1913) DT(H1808):DA(J1912) DG(H1809):DC(J1911) DG(H1810):DC(J1910) DT(H1811):DA(J1909) DA(H1812):DT(J1908) chainB (297) SER1297 0 0 0 0 0 0 0 2 0 0 0 0 (336) ARG1336 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivSrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2au0_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=UNMODIFIED PREINSERTION BINARY COMPLEX organism=Sulfolobus solfataricus DNA sequence DG(H1801):DC(J1919) DG(H1802):DC(J1918) DT(H1803):DA(J1917) DT(H1804):DA(J1916) DG(H1805):DC(J1915) DG(H1806):DC(J1914) DA(H1807):DT(J1913) DT(H1808):DA(J1912) DG(H1809):DC(J1911) DG(H1810):DC(J1910) DT(H1811):DA(J1909) DA(H1812):DT(J1908) DDG(H1813):DC(J1907) chainB ( 42) ALA1042 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 57) ALA1057 0 0 0 0 0 0 0 0 0 0 0 0 7 (189) ILE1189 0 0 0 0 0 0 0 0 0 0 1 0 0 (295) ILE1295 0 0 0 0 0 0 0 3 0 0 0 0 0 (332) ARG1332 0 0 0 0 0 0 0 0 0 0 0 1 0 (336) ARG1336 0 0 0 0 0 0 0 0 0 6 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignItaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldIvsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >2ayb_AB:Viral_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HPV6A E2 DNA BINDING DOMAIN BOUND TO A 16 BASE PAIR DNA TARGET organism=Human papillomavirus type 6a DNA sequence DC(D1):DG(C16) DA(D2):DT(C15) DA(D3):DT(C14) DC(D4):DG(C13) DC(D5):DG(C12) DG(D6):DC(C11) DA(D7):DT(C10) DA(D8):DT(C9) DT(D9):DA(C8) DT(D10):DA(C7) DC(D11):DG(C6) DG(D12):DC(C5) DG(D13):DC(C4) DT(D14):DA(C3) DT(D15):DA(C2) DG(D16):DC(C1) chainA ( 14) ASN294 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS297 0 0 0 9 14 7 0 0 0 0 0 0 0 0 0 0 ( 18) CYS298 0 4 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR301 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG302 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 14) ASN294 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 ( 17) LYS297 0 0 0 0 0 0 0 0 0 0 7 14 9 0 0 0 ( 18) CYS298 0 0 0 0 0 0 0 0 0 0 0 0 2 1 4 0 ( 21) TYR301 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 ( 22) ARG302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 prot.sequence ssatpivqfqgesNclKCfrYRlndkhrhlfdlisstwhwaspkaphkhaivtvtyhseeqrqqflnvvkipptirhklgfmsmhll/ssatpivqfqgesNclKCfrYRlndkhrhlfdlisstwhwaspkaphkhaivtvtyhseeqrqqflnvvkipptirhklgfmsmhll >2ayb_B:Viral_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HPV6A E2 DNA BINDING DOMAIN BOUND TO A 16 BASE PAIR DNA TARGET organism=Human papillomavirus type 6a DNA sequence DC(C1):DG(D16) DA(C2):DT(D15) DA(C3):DT(D14) DC(C4):DG(D13) DC(C5):DG(D12) DG(C6):DC(D11) DA(C7):DT(D10) DA(C8):DT(D9) DT(C9):DA(D8) DT(C10):DA(D7) DC(C11):DG(D6) DG(C12):DC(D5) DG(C13):DC(D4) DT(C14):DA(D3) DT(C15):DA(D2) DG(C16):DC(D1) chainB ( 14) ASN294 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS297 0 0 0 9 14 7 0 0 0 0 0 0 0 0 0 0 ( 18) CYS298 0 4 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR301 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG302 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssatpivqfqgesNclKCfrYRlndkhrhlfdlisstwhwaspkaphkhaivtvtyhseeqrqqflnvvkipptirhklgfmsmhll >2ayg_A:Viral_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HPV6A E2 DNA BINDING DOMAIN BOUND TO AN 18 BASE PAIR DNA TARGET organism=Human papillomavirus type 6a DNA sequence DG(D1):DC(C18) DC(D2):DG(C17) DA(D3):DT(C16) DA(D4):DT(C15) DC(D5):DG(C14) DC(D6):DG(C13) DG(D7):DC(C12) DA(D8):DT(C11) DA(D9):DT(C10) DT(D10):DA(C9) DT(D11):DA(C8) DC(D12):DG(C7) DG(D13):DC(C6) DG(D14):DC(C5) DT(D15):DA(C4) DT(D16):DA(C3) DG(D17):DC(C2) DC(D18):DG(C1) chainA ( 14) ASN294 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS297 0 0 0 0 7 11 7 0 0 0 0 0 0 0 0 0 0 0 ( 18) CYS298 0 0 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR301 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG302 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssatpivqfqgesNclKCfrYRlndkhrhlfdlisstwhwaspkaphkhaivtvtyhseeqrqqflnvvkipptirhklgfmsmhll >2ayg_AB:Viral_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HPV6A E2 DNA BINDING DOMAIN BOUND TO AN 18 BASE PAIR DNA TARGET organism=Human papillomavirus type 6a DNA sequence DG(C1):DC(D18) DC(C2):DG(D17) DA(C3):DT(D16) DA(C4):DT(D15) DC(C5):DG(D14) DC(C6):DG(D13) DG(C7):DC(D12) DA(C8):DT(D11) DA(C9):DT(D10) DT(C10):DA(D9) DT(C11):DA(D8) DC(C12):DG(D7) DG(C13):DC(D6) DG(C14):DC(D5) DT(C15):DA(D4) DT(C16):DA(D3) DG(C17):DC(D2) DC(C18):DG(D1) chainA ( 14) ASN294 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 ( 17) LYS297 0 0 0 0 0 0 0 0 0 0 0 7 11 7 0 0 0 0 ( 18) CYS298 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 0 ( 21) TYR301 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 ( 22) ARG302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 chainB ( 14) ASN294 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS297 0 0 0 0 6 10 8 0 0 0 0 0 0 0 0 0 0 0 ( 18) CYS298 0 0 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR301 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG302 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssatpivqfqgesNclKCfrYRlndkhrhlfdlisstwhwaspkaphkhaivtvtyhseeqrqqflnvvkipptirhklgfmsmhll/ssatpivqfqgesNclKCfrYRlndkhrhlfdlisstwhwaspkaphkhaivtvtyhseeqrqqflnvvkipptirhklgfmsmhll >2b0d_AB:Restriction_endonuclease-like; title=ECORV RESTRICTION ENDONUCLEASE/GAATTC/CA2+ organism=Escherichia coli DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DA(C6):DT(D7) DT(C7):DA(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainA ( 69) ASN70 0 0 0 1 0 0 0 0 0 0 (103) THR106 0 0 0 0 0 0 9 1 0 0 (174) SER183 0 0 0 0 0 0 7 5 0 0 (176) ASN185 0 0 0 0 0 0 12 19 0 0 (177) THR186 0 0 0 0 1 11 7 0 0 0 (179) ASN188 0 0 0 0 0 1 4 0 0 0 chainB ( 69) ASN70 0 0 0 0 0 4 9 4 0 0 (103) THR106 0 0 1 8 0 0 0 0 0 0 (177) SER183 0 0 4 7 0 0 0 0 0 0 (179) ASN185 0 0 17 10 0 0 0 0 0 0 (180) THR186 0 0 0 7 12 1 0 0 0 0 (182) ASN188 0 0 0 4 1 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkekikfTlggytsfirnntknivypfdqyiahwiigyvytrvlktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >2b0d_B:Restriction_endonuclease-like; title=ECORV RESTRICTION ENDONUCLEASE/GAATTC/CA2+ organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) DA(D6):DT(C7) DT(D7):DA(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) DT(D11):DA(C2) chainB ( 69) ASN70 0 0 4 9 4 0 0 0 0 0 (103) THR106 0 0 0 0 0 0 8 1 0 0 (177) SER183 0 0 0 0 0 0 7 4 0 0 (179) ASN185 0 0 0 0 0 0 10 17 0 0 (180) THR186 0 0 0 0 1 12 7 0 0 0 (182) ASN188 0 0 0 0 0 1 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >2b0e_AB:Restriction_endonuclease-like; title=ECORV RESTRICTION ENDONUCLEASE/GAAUTC/CA2+ organism=Escherichia coli DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DA(C6):DU(D7) DU(C7):DA(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainA ( 69) ASN70 0 0 5 8 3 0 0 0 0 0 (100) THR106 0 0 0 0 0 0 9 0 0 0 (171) SER183 0 0 0 0 0 0 7 4 0 0 (173) ASN185 0 0 0 0 0 0 10 17 0 0 (174) THR186 0 0 0 0 1 7 6 0 0 0 (176) ASN188 0 0 0 0 0 0 4 0 0 0 chainB ( 69) ASN70 0 0 0 0 0 2 8 5 0 0 (100) LYS104 0 2 0 0 0 0 0 0 0 0 (102) THR106 0 0 0 9 0 0 0 0 0 0 (174) SER183 0 0 3 7 0 0 0 0 0 0 (176) ASN185 0 0 14 10 0 0 0 0 0 0 (177) THR186 0 0 0 8 9 2 0 0 0 0 (179) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytkikfTlggytsfirnntknivypfdqyiahwiigyvytrvlktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkkiKfTlggytsfirnntknivypfdqyiahwiigyvytrvslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >2b0e_B:Restriction_endonuclease-like; title=ECORV RESTRICTION ENDONUCLEASE/GAAUTC/CA2+ organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) DA(D6):DU(C7) DU(D7):DA(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) DT(D11):DA(C2) chainB ( 69) ASN70 0 0 5 8 2 0 0 0 0 0 (100) LYS104 0 0 0 0 0 0 0 0 2 0 (102) THR106 0 0 0 0 0 0 9 0 0 0 (174) SER183 0 0 0 0 0 0 7 3 0 0 (176) ASN185 0 0 0 0 0 0 10 14 0 0 (177) THR186 0 0 0 0 2 9 8 0 0 0 (179) ASN188 0 0 0 0 0 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkkiKfTlggytsfirnntknivypfdqyiahwiigyvytrvslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >2b9s_A:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes; title=CRYSTAL STRUCTURE OF HETERODIMERIC L. DONOVANI TOPOISOMERASE I- VANADATE-DNA COMPLEX organism=LEISHMANIA DONOVANI DNA sequence DA(E101):DT(D22) DA(E102):DT(D21) DA(E103):DT(D20) DA(E104):DT(D19) DA(E105):DT(D18) DT(E106):DA(D17) DT(E107):DA(D16) DT(E108):DA(D15) DT(E109):DA(D14) DT(E110):DA(D13) DC(E111):DG(D12) DT(E112):DA(D11) DA(E113):DT(C10) DA(E114):DT(C9) DG(E115):DC(C8) DT(E116):DA(C7) DC(E117):DG(C6) DT(E118):DA(C5) DT(E119):DA(C4) DT(E120):DA(C3) DT(E121):DA(C2) DT(E122):DA(C1) chainA ( 15) LYS41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (152) ASN178 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (164) ARG190 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (224) MET250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (226) TYR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 (228) MET254 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 (236) LYS262 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (291) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 (326) LYS352 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 (327) ASP353 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (365) THR391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence dlnwweqenlriamKgerrwetlahngvlfppeyephgipifydgrefkmtpeeeevatmfavmkehdyyrmevfrrnffeswreildkrqhpirrlelcdfepiyqwhlvqrekklsrtkeekkaikekqdaeaepyrycvwdgrreqvaNfrveppglfrgRgkhplmgklkvrvqpeditinigetaevpvppaghkwaavqhdhtvtwlamwrdsvagnMkYvMlapsssvKgqsdmvkfekarklkdkvddirasymedfksndlhvaqravamyfidrlalrvgNekgedeadtvgccslrvehiqlmpdnivrfdflgKDsiryqndvavlpevyallqrftrrkspgmdifdqlnpTqlndhlksfmdglsakvfrtynasitldrwfkekpwstadklayfnkantevailcnhqks >2b9s_AB:Eukaryotic_DNA_topoisomerase_I,_N-terminal_DNA-binding_fragment;DNA_breaking-rejoining_enzymes; title=CRYSTAL STRUCTURE OF HETERODIMERIC L. DONOVANI TOPOISOMERASE I- VANADATE-DNA COMPLEX organism=LEISHMANIA DONOVANI DNA sequence DA(C1):DT(E122) DA(C2):DT(E121) DA(C3):DT(E120) DA(C4):DT(E119) DA(C5):DT(E118) DG(C6):DC(E117) DA(C7):DT(E116) DC(C8):DG(E115) DT(C9):DA(E114) DT(C10):DA(E113) DA(D11):DT(E112) DG(D12):DC(E111) DA(D13):DT(E110) DA(D14):DT(E109) DA(D15):DT(E108) DA(D16):DT(E107) DA(D17):DT(E106) DT(D18):DA(E105) DT(D19):DA(E104) DT(D20):DA(E103) DT(D21):DA(E102) DT(D22):DA(E101) chainA ( 15) LYS41 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) ASN178 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (164) ARG190 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (224) MET250 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) TYR252 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) MET254 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) LYS262 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) ASN317 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) LYS352 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 (327) ASP353 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (365) THR391 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 11) ASN221 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dlnwweqenlriamKgerrwetlahngvlfppeyephgipifydgrefkmtpeeeevatmfavmkehdyyrmevfrrnffeswreildkrqhpirrlelcdfepiyqwhlvqrekklsrtkeekkaikekqdaeaepyrycvwdgrreqvaNfrveppglfrgRgkhplmgklkvrvqpeditinigetaevpvppaghkwaavqhdhtvtwlamwrdsvagnMkYvMlapsssvKgqsdmvkfekarklkdkvddirasymedfksndlhvaqravamyfidrlalrvgNekgedeadtvgccslrvehiqlmpdnivrfdflgKDsiryqndvavlpevyallqrftrrkspgmdifdqlnpTqlndhlksfmdglsakvfrtynasitldrwfkekpwstadklayfnkantevailcnhqks/kavslgtskiNyidpriicswakaqdvpinkifsatiqkkfpwamnaenfdf >2b9s_B:DNA_breaking-rejoining_enzymes; title=CRYSTAL STRUCTURE OF HETERODIMERIC L. DONOVANI TOPOISOMERASE I- VANADATE-DNA COMPLEX organism=LEISHMANIA DONOVANI DNA sequence DA(E101):DT(D22) DA(E102):DT(D21) DA(E103):DT(D20) DA(E104):DT(D19) DA(E105):DT(D18) DT(E106):DA(D17) DT(E107):DA(D16) DT(E108):DA(D15) DT(E109):DA(D14) DT(E110):DA(D13) DC(E111):DG(D12) DT(E112):DA(D11) DA(E113):DT(C10) DA(E114):DT(C9) DG(E115):DC(C8) DT(E116):DA(C7) DC(E117):DG(C6) DT(E118):DA(C5) DT(E119):DA(C4) DT(E120):DA(C3) DT(E121):DA(C2) DT(E122):DA(C1) chainB ( 11) ASN221 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence kavslgtskiNyidpriicswakaqdvpinkifsatiqkkfpwamnaenfdf >2bam_A:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA AND CALCIUM IONS (PRE- REACTIVE COMPLEX). organism=Bacillus amyloliquefaciens DNA sequence DA(C2):DT(D11) DT(C3):DA(D10) DG(C4):DC(D9) DG(C5):DC(D8) DA(C6):DT(D7) DT(C7):DA(D6) DC(C8):DG(D5) DC(C9):DG(D4) DA(C10):DT(D3) DT(C11):DA(D2) chainA (116) ASN116 0 0 0 7 7 1 0 0 0 0 (122) ARG122 0 0 0 0 0 0 2 4 0 0 (153) THR153 0 0 0 1 4 0 0 0 0 0 (154) ASP154 0 0 5 6 0 0 0 0 0 0 (155) ARG155 0 23 16 6 0 0 0 0 0 0 (156) VAL156 0 0 0 0 1 0 0 0 0 0 (196) ASP196 0 0 0 0 0 3 5 2 0 0 (198) MET198 0 0 0 4 4 1 0 0 0 0 prot.sequence mevekefitdeakellskdkliqqaynevktsicspiwpatsktftinntekncngvvpikelcytlledtynwyrekpldilklekkkggpidvykefienselkrvgmefetgNissahRsmnklllglkhgeidlaiilmpikqlayylTDRVtnfeelepyfeltegqpfifigfnaeaynsnvplipkgsDgMskrsikkwk >2bam_AB:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA AND CALCIUM IONS (PRE- REACTIVE COMPLEX). organism=Bacillus amyloliquefaciens DNA sequence DA(C2):DT(D11) DT(C3):DA(D10) DG(C4):DC(D9) DG(C5):DC(D8) DA(C6):DT(D7) DT(C7):DA(D6) DC(C8):DG(D5) DC(C9):DG(D4) DA(C10):DT(D3) DT(C11):DA(D2) chainA (116) ASN116 0 0 0 7 7 1 0 0 0 0 (122) ARG122 0 0 0 0 0 0 2 4 0 0 (153) THR153 0 0 0 1 4 0 0 0 0 0 (154) ASP154 0 0 5 6 0 0 0 0 0 0 (155) ARG155 0 23 16 6 0 0 0 0 0 0 (156) VAL156 0 0 0 0 1 0 0 0 0 0 (196) ASP196 0 0 0 0 0 3 5 2 0 0 (198) MET198 0 0 0 4 4 1 0 0 0 0 chainB (116) ASN116 0 0 0 0 0 13 5 0 0 0 (122) ARG122 0 0 5 2 0 0 0 0 0 0 (153) THR153 0 0 0 0 0 4 0 0 0 0 (154) ASP154 0 0 0 0 0 0 7 7 0 0 (155) ARG155 0 0 0 0 0 0 6 21 22 0 prot.sequence mevekefitdeakellskdkliqqaynevktsicspiwpatsktftinntekncngvvpikelcytlledtynwyrekpldilklekkkggpidvykefienselkrvgmefetgNissahRsmnklllglkhgeidlaiilmpikqlayylTDRVtnfeelepyfeltegqpfifigfnaeaynsnvplipkgsDgMskrsikkwk/mevekefitdeakellskdkliqqaynevktsicspiwpatsktftinntekncngvvpikelcytlledtynwyrekpldilklekkkggpidvykefienselkrvgmefetgNiSsahRsmnklllglkhgeidlaiilmpikqlayylTDRvtnfeelepyfeltegqpfifigfnaeaynsnvplipkgsdgmskrsikkwkdkv >2bcq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;DNA_polymerase_beta-like,_second_domain; title=DNA POLYMERASE LAMBDA IN COMPLEX WITH A DNA DUPLEX CONTAINING AN UNPAIRED DTMP organism=Homo sapiens DNA sequence DC(T5):DG(P7) DG(T6):DC(P6) DT(T8):DA(P5) DA(T9):DT(P4) DC(T10):DG(P3) DT(T11):DA(P2) DG(T12):DC(P1) chainA (221) LYS472 0 0 0 2 0 0 0 (254) TYR505 9 9 0 0 0 0 0 (259) ALA510 6 0 0 0 0 0 0 (262) ASN513 10 0 0 0 0 0 0 (263) ARG514 26 0 0 0 0 0 0 (266) ARG517 13 6 0 0 0 0 0 (278) GLU529 0 9 2 0 0 0 0 prot.sequence hnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >2bcr_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA IN COMPLEX WITH A DNA DUPLEX CONTAINING AN UNPAIRED DAMP organism=Homo sapiens DNA sequence DC(T5):DG(P7) DG(T6):DC(P6) DT(T8):DA(P5) DA(T9):DT(P4) DC(T10):DG(P3) DT(T11):DA(P2) DG(T12):DC(P1) chainA (222) LYS472 0 0 0 2 0 0 0 (255) TYR505 9 9 0 0 0 0 0 (260) ALA510 6 0 0 0 0 0 0 (263) ASN513 10 0 0 0 0 0 0 (264) ARG514 30 0 0 0 0 0 0 (267) ARG517 12 6 0 0 0 0 0 (279) GLU529 0 8 1 0 0 0 0 prot.sequence nhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >2bcs_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA IN COMPLEX WITH A DNA DUPLEX CONTAINING AN UNPAIRED DCMP organism=Homo sapiens DNA sequence DC(P1):DG(T12) DA(P2):DT(T11) DG(P3):DC(T10) DT(P4):DA(T9) DA(P5):DT(T8) DC(P6):DG(T6) DG(P7):DC(T5) chainA (221) LYS472 0 0 0 2 0 0 0 (254) TYR505 0 0 0 0 0 9 10 (259) ALA510 0 0 0 0 0 0 6 (262) ASN513 0 0 0 0 0 0 10 (263) ARG514 0 0 0 0 0 0 29 (266) ARG517 0 0 0 0 0 7 11 (278) GLU529 0 0 0 0 1 9 0 prot.sequence hnlhiteklevlakaysvqgdKwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >2bcu_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA IN COMPLEX WITH A DNA DUPLEX CONTAINING AN UNPAIRED DAMP AND A T:T MISMATCH organism=Homo sapiens DNA sequence DC(T5):DG(P7) DG(T6):DC(P6) DT(T8):DT(P5) DA(T9):DT(P4) DC(T10):DG(P3) DT(T11):DA(P2) DG(T12):DC(P1) chainA (223) LYS472 0 0 1 5 0 0 0 (256) TYR505 8 9 0 0 0 0 0 (261) ALA510 6 0 0 0 0 0 0 (264) ASN513 10 0 0 0 0 0 0 (265) ARG514 29 0 0 0 0 0 0 (268) ARG517 11 7 0 0 0 0 0 (280) GLU529 0 9 0 0 0 0 0 prot.sequence tnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >2bdp_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNA organism=Geobacillus stearothermophilus DNA sequence DG(P8):DC(T35) DC(P9):DG(T34) DA(P10):DT(T33) DT(P11):DA(T32) DG(P12):DC(T31) DA(P13):DT(T30) DT(P14):DA(T29) DG(P15):DC(T28) DC(P16):DG(T27) chainA (286) LYS582 0 0 0 0 3 5 0 0 0 (319) ARG615 0 0 0 0 0 0 0 3 8 (329) ASN625 0 0 0 0 0 1 4 1 0 (333) ARG629 0 0 0 0 0 0 0 3 6 (418) TYR714 0 0 0 0 0 0 0 0 50 (501) GLN797 0 0 0 0 0 0 0 1 4 (533) HIS829 0 0 0 0 0 0 0 1 1 prot.sequence aamaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvraaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2bgw_A:Restriction_endonuclease-like;RuvA_domain_2-like; title=XPF FROM AEROPYRUM PERNIX, COMPLEX WITH DNA organism=Aeropyrum pernix DNA sequence DG(C1):DC(D15) DA(C2):DT(D14) DT(C3):DA(D13) DC(C4):DG(D12) DA(C5):DT(D11) DC(C6):DG(D10) DA(C7):DT(D9) DG(C8):DC(D8) DA(C9):DT(D7) DT(C10):DA(D6) DG(C11):DC(D5) DC(C12):DG(D4) DT(C13):DA(D3) DG(C14):DC(D2) DA(C15):DT(D1) chainA ( 76) ALA86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 77) GLU87 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 (113) TYR123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (172) ARG182 0 0 0 0 0 0 0 0 0 0 0 0 6 11 4 prot.sequence mledpggrprvyvdvreerspvpsileslgvqvipkqlpmgdylvsdsiiverktssdfakslfdgrlfeqasrlAEhyetvfiivegppvprryrgrerslyaamaalqldYgirlmntmdpkgtalvieslarlstreggqrivihkkprlsdvrewqlyilqsfpgigRrtaerilerfgslerfftaskaeiskvegigekraeeikkilmtpyk >2bgw_AB:Restriction_endonuclease-like;RuvA_domain_2-like; title=XPF FROM AEROPYRUM PERNIX, COMPLEX WITH DNA organism=Aeropyrum pernix DNA sequence DG(C1):DC(D15) DA(C2):DT(D14) DT(C3):DA(D13) DC(C4):DG(D12) DA(C5):DT(D11) DC(C6):DG(D10) DA(C7):DT(D9) DG(C8):DC(D8) DA(C9):DT(D7) DT(C10):DA(D6) DG(C11):DC(D5) DC(C12):DG(D4) DT(C13):DA(D3) DG(C14):DC(D2) DA(C15):DT(D1) chainA ( 76) ALA86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 77) GLU87 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 (113) TYR123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (172) ARG182 0 0 0 0 0 0 0 0 0 0 0 0 6 11 4 chainB prot.sequence mledpggrprvyvdvreerspvpsileslgvqvipkqlpmgdylvsdsiiverktssdfakslfdgrlfeqasrlAEhyetvfiivegppvprryrgrerslyaamaalqldYgirlmntmdpkgtalvieslarlstreggqrivihkkprlsdvrewqlyilqsfpgigRrtaerilerfgslerfftaskaeiskvegigekraeeikkilmtpyk/rprvyvdvreerspvpsileslgvqvipkqlpmgdylvsdsiiverktssdfakslfdgrlfeqasrlaehyetvFIivegppvprryrgrerslyaamaalqldygirlmnTmdpkgtalvieslarlstkprlsdvrewqlyilqsfpgigrrtaerilerfgslerffTaskaeiskvegigekraeeikkilmtpy >2bjc_A:lambda_repressor-like_DNA-binding_domains; title=NMR STRUCTURE OF A PROTEIN-DNA COMPLEX OF AN ALTERED SPECIFICITY MUTANT OF THE LAC REPRESSOR HEADPIECE THAT MIMICS THE GAL REPRESSOR organism=ESCHERICHIA COLI DNA sequence DG(D101):DC(C22) DA(D102):DT(C21) DA(D103):DT(C20) DT(D104):DA(C19) DT(D105):DA(C18) DG(D106):DC(C17) DT(D107):DA(C16) DA(D108):DT(C15) DA(D109):DT(C14) DG(D110):DC(C13) DC(D111):DG(C12) DG(D112):DC(C11) DC(D113):DG(C10) DT(D114):DA(C9) DT(D115):DA(C8) DA(D116):DT(C7) DC(D117):DG(C6) DA(D118):DT(C5) DA(D119):DT(C4) DT(D120):DA(C3) DT(D121):DA(C2) DC(D122):DG(C1) chainA ( 6) LEU6 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 ( 7) TYR7 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 ( 17) VAL17 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 1 0 0 0 0 0 0 ( 18) ALA18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 3 0 0 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 ( 29) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 5 14 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 ( 60) GLN60 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 prot.sequence mkpvtLYdvaeyagvSVAtvSrvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkQsl >2bjc_AB:lambda_repressor-like_DNA-binding_domains; title=NMR STRUCTURE OF A PROTEIN-DNA COMPLEX OF AN ALTERED SPECIFICITY MUTANT OF THE LAC REPRESSOR HEADPIECE THAT MIMICS THE GAL REPRESSOR organism=ESCHERICHIA COLI DNA sequence DG(C1):DC(D122) DA(C2):DT(D121) DA(C3):DT(D120) DT(C4):DA(D119) DT(C5):DA(D118) DG(C6):DC(D117) DT(C7):DA(D116) DA(C8):DT(D115) DA(C9):DT(D114) DG(C10):DC(D113) DC(C11):DG(D112) DG(C12):DC(D111) DC(C13):DG(D110) DT(C14):DA(D109) DT(C15):DA(D108) DA(C16):DT(D107) DC(C17):DG(D106) DA(C18):DT(D105) DA(C19):DT(D104) DT(C20):DA(D103) DT(C21):DA(D102) DC(C22):DG(D101) chainA ( 6) LEU6 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) TYR7 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL17 0 0 0 0 0 0 1 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ALA18 0 0 0 0 0 3 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) HIS29 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 14 5 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 ( 60) GLN60 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 6) LEU106 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 ( 7) TYR107 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 ( 16) SER116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 ( 17) VAL117 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 1 0 0 0 0 0 0 ( 18) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 3 0 0 0 0 0 ( 21) SER121 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 ( 29) HIS129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 53) ALA153 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 56) LEU156 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 ( 57) ALA157 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 ( 60) GLN160 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 prot.sequence mkpvtLYdvaeyagvSVAtvSrvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkQsl/mkpvtLYdvaeyagvSVAtvSrvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkQsl >2bnw_BCD:Ribbon-helix-helix; title=STRUCTURAL BASIS FOR COOPERATIVE BINDING OF RIBBON-HELIX-HELIX OMEGA REPRESSOR TO DIRECT DNA HEPTAD REPEATS organism=STREPTOCOCCUS PYOGENES DNA sequence DG(E1):DC(F35) DA(E2):DT(F34) DA(E3):DT(F33) DT(E4):DA(F32) DC(E5):DG(F31) DA(E6):DT(F30) DC(E7):DG(F29) DA(E8):DT(F28) DA(E9):DT(F27) DA(E10):DT(F26) DT(E11):DA(F25) DC(E12):DG(F24) DA(E13):DT(F23) DC(E14):DG(F22) DA(E15):DT(F21) DA(E16):DT(F20) DG(E17):DC(F19) chainB ( 11) THR29 0 0 0 4 6 5 0 0 0 0 0 0 0 0 0 0 0 ( 13) ARG31 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 11) THR29 0 0 0 0 0 0 0 0 0 0 3 10 11 0 0 0 0 ( 13) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 6 15 22 0 0 chainD ( 3) ASP27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 5) THR29 0 0 0 0 0 0 0 0 0 0 6 6 2 0 0 0 0 ( 7) ARG31 0 0 0 0 0 0 0 0 0 6 9 1 0 0 0 0 0 prot.sequence makkdimgdkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl/makkdimgdkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl/mgDkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl >2bnw_C:Ribbon-helix-helix; title=STRUCTURAL BASIS FOR COOPERATIVE BINDING OF RIBBON-HELIX-HELIX OMEGA REPRESSOR TO DIRECT DNA HEPTAD REPEATS organism=STREPTOCOCCUS PYOGENES DNA sequence DG(E1):DC(F35) DA(E2):DT(F34) DA(E3):DT(F33) DT(E4):DA(F32) DC(E5):DG(F31) DA(E6):DT(F30) DC(E7):DG(F29) DA(E8):DT(F28) DA(E9):DT(F27) DA(E10):DT(F26) DT(E11):DA(F25) DC(E12):DG(F24) DA(E13):DT(F23) DC(E14):DG(F22) DA(E15):DT(F21) DA(E16):DT(F20) DG(E17):DC(F19) chainC ( 11) THR29 0 0 0 0 0 0 0 0 0 0 3 10 11 0 0 0 0 ( 13) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 6 15 22 0 0 prot.sequence makkdimgdkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl >2bnz_A:Ribbon-helix-helix; title=STRUCTURAL BASIS FOR COOPERATIVE BINDING OF RIBBON-HELIX-HELIX OMEGA REPRESSOR TO INVERTED DNA HEPTAD REPEATS organism=STREPTOCOCCUS PYOGENES DNA sequence DG(E1):DC(F35) DA(E2):DT(F34) DA(E3):DT(F33) DT(E4):DA(F32) DC(E5):DG(F31) DA(E6):DT(F30) DC(E7):DG(F29) DA(E8):DT(F28) DA(E9):DT(F27) DG(E10):DC(F26) DT(E11):DA(F25) DG(E12):DC(F24) DA(E13):DT(F23) DT(E14):DA(F22) DT(E15):DA(F21) DA(E16):DT(F20) DG(E17):DC(F19) chainA ( 8) THR29 0 0 0 6 9 1 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG31 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kdimgdkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl >2bnz_ACD:Ribbon-helix-helix; title=STRUCTURAL BASIS FOR COOPERATIVE BINDING OF RIBBON-HELIX-HELIX OMEGA REPRESSOR TO INVERTED DNA HEPTAD REPEATS organism=STREPTOCOCCUS PYOGENES DNA sequence DG(E1):DC(F35) DA(E2):DT(F34) DA(E3):DT(F33) DT(E4):DA(F32) DC(E5):DG(F31) DA(E6):DT(F30) DC(E7):DG(F29) DA(E8):DT(F28) DA(E9):DT(F27) DG(E10):DC(F26) DT(E11):DA(F25) DG(E12):DC(F24) DA(E13):DT(F23) DT(E14):DA(F22) DT(E15):DA(F21) DA(E16):DT(F20) DG(E17):DC(F19) chainA ( 8) THR29 0 0 0 6 9 1 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG31 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 10) THR29 0 0 0 0 0 0 0 0 0 0 5 5 4 0 0 0 0 ( 12) ARG31 0 0 0 0 0 0 0 0 0 0 0 1 8 6 0 0 0 chainD ( 5) THR29 0 0 0 0 0 0 0 0 0 0 11 11 3 0 0 0 0 ( 7) ARG31 0 0 0 0 0 0 0 0 17 15 9 0 0 0 0 0 0 prot.sequence kdimgdkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl/akkdimgdkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl/mgdkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl >2bop_A:Viral_DNA-binding_domain; title=CRYSTAL STRUCTURE AT 1.7 ANGSTROMS OF THE BOVINE PAPILLOMAVIRUS-1 E2 DNA-BINDING DOMAIN BOUND TO ITS DNA TARGET organism=Bovine papillomavirus type 1 DNA sequence DC(B1) DC(B2) DG(B3) DA(B4) DC(B5) DC(B6) DG(B7) DA(B8) DC(B9) DG(B10) DT(B11) DC(B12) DG(B13) DG(B14) DT(B15) DC(B16) DG(B17) chainA ( 14) LYS339 0 0 0 0 0 0 0 0 0 0 0 7 13 5 0 0 0 ( 15) CYS340 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 18) PHE343 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 prot.sequence scfalisgtaNqvKCyrFrvkknhrhryenctttwftvadngaerqgqaqilitfgspsqrqdflkhvplppgmnisgftasldf >2bpf_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURES OF TERNARY COMPLEXES OF RAT DNA POLYMERASE BETA, A DNA TEMPLATE-PRIMER, AND DDCTP organism=Rattus norvegicus DNA sequence DC(P1):DG(T11) DG(P2):DC(T10) DG(P3):DC(T9) DC(P4):DG(T8) DG(P5):DC(T7) DC(P6):DG(T6) DC(P7):DG(T5) DCT(A338):DG(T4) chainA (141) ARG149 0 0 0 0 0 0 0 5 (172) SER180 0 0 0 0 0 0 0 10 (175) ARG183 0 0 0 0 0 0 0 4 (180) SER188 0 0 0 0 0 0 0 3 (182) ASP190 0 0 0 0 0 0 0 9 (184) ASP192 0 0 0 0 0 0 0 7 (226) LYS234 0 0 0 0 7 2 0 0 (260) TYR271 0 0 0 0 0 0 7 8 (265) ASP276 0 0 0 0 0 0 0 7 (268) ASN279 0 0 0 0 0 0 0 11 (272) ARG283 0 0 0 0 0 0 4 19 (284) GLU295 0 0 0 0 0 0 2 0 prot.sequence etlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrknedklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetKfmgvcqlpseneyphrridirlipkdqyycgvlYftgsdifNknmRahalekgftinEytirplgvtgvageplpvdseqdifdyiqwryrepkdrse >2bpg_B:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURES OF TERNARY COMPLEXES OF RAT DNA POLYMERASE BETA, A DNA TEMPLATE-PRIMER, AND DDCTP organism=Rattus norvegicus DNA sequence DG(C4):DCT(B338) DG(C5):DC(D7) DG(C6):DC(D6) DC(C7):DG(D5) DG(C8):DC(D4) DC(C9):DG(D3) DC(C10):DG(D2) DG(C11):DC(D1) chainB (141) ARG149 3 0 0 0 0 0 0 0 (172) SER180 8 0 0 0 0 0 0 0 (175) ARG183 5 0 0 0 0 0 0 0 (180) SER188 3 0 0 0 0 0 0 0 (182) ASP190 15 0 0 0 0 0 0 0 (184) ASP192 11 0 0 0 0 0 0 0 (226) LYS234 0 0 0 6 0 0 0 0 (243) ARG254 4 0 0 0 0 0 0 0 (245) ASP256 1 0 0 0 0 0 0 0 (260) TYR271 2 9 1 0 0 0 0 0 (265) ASP276 6 0 0 0 0 0 0 0 (268) ASN279 2 0 0 0 0 0 0 0 (269) LYS280 3 0 0 0 0 0 0 0 (272) ARG283 5 3 0 0 0 0 0 0 prot.sequence etlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrknedklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetKfmgvcqlpseneyphrridirlipkdqyycgvlYftgsdifnKnmRahalekgftineytirplgvtgvageplpvdseqdifdyiqwryrepkdrse >2bq3_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA ADDUCT BYPASS POLYMERIZATION BY SULFOLOBUS SOLFATARICUS DPO4. ANALYSIS AND CRYSTAL STRUCTURES OF MULTIPLE BASE-PAIR SUBSTITUTION AND FRAMESHIFT PRODUCTS WITH THE ADDUCT 1,N2-ETHENOGUANINE organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) chainA (336) ARG336 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2bqu_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA ADDUCT BYPASS POLYMERIZATION BY SULFOLOBUS SOLFATARICUS DPO4. ANALYSIS AND CRYSTAL STRUCTURES OF MULTIPLE BASE-PAIR SUBSTITUTION AND FRAMESHIFT PRODUCTS WITH THE ADDUCT 1,N2-ETHENOGUANINE organism=SULFOLOBUS SOLFATARICUS DNA sequence DT(T4):DAD(A1342) DG(T6):DC(P13) DA(T7):DT(P12) DA(T8):DT(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA ( 7) ASP7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) TYR10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) PHE11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) TYR12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL32 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA44 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR45 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG51 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP105 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) GLU106 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) LYS159 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2bsq_E:Ribbon-helix-helix; title=FITAB BOUND TO DNA organism=NEISSERIA GONORRHOEAE DNA sequence DA(I1):DT(J72) DG(I2):DC(J71) DA(I3):DT(J70) DT(I4):DA(J69) DT(I5):DA(J68) DG(I6):DC(J67) DC(I7):DG(J66) DT(I8):DA(J65) DA(I9):DT(J64) DT(I10):DA(J63) DC(I11):DG(J62) DA(I12):DT(J61) DT(I13):DA(J60) DT(I14):DA(J59) DT(I15):DA(J58) DT(I16):DA(J57) DT(I17):DA(J56) DT(I18):DA(J55) DT(I19):DA(J54) DT(I20):DA(J53) DA(I21):5IU(J52) DT(I22):DA(J51) DT(I23):DA(J50) DT(I24):DA(J49) DT(I25):DA(J48) DG(I26):DC(J47) DA(I27):DT(J46) DT(I28):DA(J45) DA(I29):DT(J44) DG(I30):DC(J43) DC(I31):DG(J42) DA(I32):DT(J41) DT(I33):DA(J40) 5IU(I34):DA(J39) DT(I35):DA(J38) DG(I36):DC(J37) chainE ( 2) SER3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 4) VAL5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 ( 6) ARG7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 15 5 0 0 0 0 0 0 0 0 0 prot.sequence aSvViRnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeiggveledvrg >2bsq_EFGH:PIN_domain-like;Ribbon-helix-helix; title=FITAB BOUND TO DNA organism=NEISSERIA GONORRHOEAE DNA sequence DC(J37):DG(I36) DA(J38):DT(I35) DA(J39):5IU(I34) DA(J40):DT(I33) DT(J41):DA(I32) DG(J42):DC(I31) DC(J43):DG(I30) DT(J44):DA(I29) DA(J45):DT(I28) DT(J46):DA(I27) DC(J47):DG(I26) DA(J48):DT(I25) DA(J49):DT(I24) DA(J50):DT(I23) DA(J51):DT(I22) 5IU(J52):DA(I21) DA(J53):DT(I20) DA(J54):DT(I19) DA(J55):DT(I18) DA(J56):DT(I17) DA(J57):DT(I16) DA(J58):DT(I15) DA(J59):DT(I14) DA(J60):DT(I13) DT(J61):DA(I12) DG(J62):DC(I11) DA(J63):DT(I10) DT(J64):DA(I9) DA(J65):DT(I8) DG(J66):DC(I7) DC(J67):DG(I6) DA(J68):DT(I5) DA(J69):DT(I4) DT(J70):DA(I3) DC(J71):DG(I2) DT(J72):DA(I1) chainE ( 2) SER3 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) VAL5 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG7 0 0 0 0 0 0 0 0 0 5 15 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 2) SER3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 4) VAL5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 ( 6) ARG7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 13 0 0 0 0 chainG ( 2) SER3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 4) VAL5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 ( 6) ARG7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 4 0 0 0 0 0 0 0 0 0 chainH ( 2) SER3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) VAL5 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG7 0 0 0 0 14 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLU29 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aSvViRnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeiggveledvrg/aSvViRnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeiggvele/aSvViRnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeiggveledvr/aSvViRnlseathnaikfraraagrstEaeirlildniakaqqtvrlgsmlasigqeiggvel >2c22_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=EFFICIENT AND HIGH FIDELITY INCORPORATION OF DCTP OPPOSITE 7,8- DIHYDRO-8-OXODEOXYGUANOSINE BY SULFOLOBUS SOLFATARICUS DNA POLYMERASE DPO4 organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) chainA (336) ARG336 0 0 0 0 0 0 0 0 0 0 0 5 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2c28_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=EFFICIENT AND HIGH FIDELITY INCORPORATION OF DCTP OPPOSITE 7,8- DIHYDRO-8-OXODEOXYGUANOSINE BY SULFOLOBUS SOLFATARICUS DNA POLYMERASE DPO4 organism=SULFOLOBUS SOLFATARICUS DNA sequence DC(T4):DG(A1342) DG(T6):DC(P13) DA(T7):DT(P12) DA(T8):DT(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA ( 12) TYR12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL32 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA44 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfYaqveevlnpslkgkpvvvcVfsgrfedsgAvAtanyearkfgvkAgipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2c2d_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=EFFICIENT AND HIGH FIDELITY INCORPORATION OF DCTP OPPOSITE 7,8- DIHYDRO-8-OXODEOXYGUANOSINE BY SULFOLOBUS SOLFATARICUS DNA POLYMERASE DPO4 organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(T6):DC(P13) DA(T7):DT(P12) DA(T8):DT(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA (244) SER244 0 0 0 2 0 0 0 0 0 0 0 0 0 (295) ILE295 0 0 2 2 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 5 1 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldIvsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2c2e_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=EFFICIENT AND HIGH FIDELITY INCORPORATION OF DCTP OPPOSITE 7,8- DIHYDRO-8-OXODEOXYGUANOSINE BY SULFOLOBUS SOLFATARICUS DNA POLYMERASE DPO4 organism=SULFOLOBUS SOLFATARICUS DNA sequence DC(T4):DC(P14) DG(T6):DC(P13) DA(T7):DT(P12) DA(T8):DT(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA ( 60) PRO60 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) SER244 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (295) ILE295 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (332) ARG332 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 0 5 1 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagiPiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldIvsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >2c2r_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=EFFICIENT AND HIGH FIDELITY INCORPORATION OF DCTP OPPOSITE 7,8- DIHYDRO-8-OXODEOXYGUANOSINE BY SULFOLOBUS SOLFATARICUS DNA POLYMERASE DPO4 organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(T6):DC(P13) DA(T7):DT(P12) DA(T8):DT(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA (244) SER244 0 0 0 1 0 0 0 0 0 0 0 0 0 (285) HIS285 0 0 0 0 0 1 0 0 0 0 0 0 0 (295) ILE295 0 0 3 6 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 7 1 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldIvsrgrtfphgisketaysesvkllqkileederkirrigvRfsKfi >2c62_AB:ssDNA-binding_transcriptional_regulator_domain; title=CRYSTAL STRUCTURE OF THE HUMAN TRANSCRIPTION COFACTOR PC4 IN COMPLEX WITH SINGLE-STRANDED DNA organism=HOMO SAPIENS DNA sequence DT(C5) DT(C6) DT(C7) DT(C8) DT(C9) DT(C10) DT(C11) DT(C12) DT(C13) DT(C14) DT(C15) DT(C16) DT(C17) DT(C18) DT(C19) DG(C20) chainA ( 14) ARG75 0 0 19 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) PHE77 0 0 0 28 2 0 0 0 0 0 0 0 0 0 0 0 ( 19) LYS80 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU82 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 23) ASP84 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG86 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) TRP89 53 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) LYS97 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO98 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG100 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER104 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 14) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 29 8 0 ( 16) PHE77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 ( 19) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 23) ASP84 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 25) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 27) TYR88 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 28) TRP89 0 0 0 0 0 0 0 0 2 0 0 51 14 0 0 0 ( 36) LYS97 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 ( 37) PRO98 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 ( 39) ARG100 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 40) LYS101 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 43) SER104 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 45) ASN106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence amfqigkmryvsvRdFkgKvLiDiReyWmdpegemKPgRkgiSlnpeqwsqlkeqisdiddavrkl/amfqigkmryvsvRdFkgKvliDiReYWmDpegemKPgRKgiSlNpeqwsqlkeqisdiddavrkl >2c62_B:ssDNA-binding_transcriptional_regulator_domain; title=CRYSTAL STRUCTURE OF THE HUMAN TRANSCRIPTION COFACTOR PC4 IN COMPLEX WITH SINGLE-STRANDED DNA organism=HOMO SAPIENS DNA sequence DT(C5) DT(C6) DT(C7) DT(C8) DT(C9) DT(C10) DT(C11) DT(C12) DT(C13) DT(C14) DT(C15) DT(C16) DT(C17) DT(C18) DT(C19) DG(C20) chainB ( 14) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 29 8 0 ( 16) PHE77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 ( 19) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 23) ASP84 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 25) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 27) TYR88 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 28) TRP89 0 0 0 0 0 0 0 0 2 0 0 51 14 0 0 0 ( 36) LYS97 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 ( 37) PRO98 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 ( 39) ARG100 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 40) LYS101 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 43) SER104 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 45) ASN106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence amfqigkmryvsvRdFkgKvliDiReYWmDpegemKPgRKgiSlNpeqwsqlkeqisdiddavrkl >2c6y_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF INTERLEUKIN ENHANCER-BINDING FACTOR 1 BOUND TO DNA organism=HOMO SAPIENS DNA sequence DG(C2):DC(D16) DT(C3):DA(D15) DT(C4):DA(D14) DG(C5):DC(D13) DT(C6):DA(D12) DA(C7):DT(D11) DA(C8):DT(D10) DA(C9):DT(D9) DC(C10):DG(D8) DA(C11):DT(D7) DA(C12):DT(D6) DT(C13):DA(D5) DA(C14):DT(D4) DC(C15):DG(D3) DA(C16):DT(D2) chainA ( 49) ASN49 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 ( 50) SER50 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 52) ARG52 0 0 0 0 0 0 0 1 5 11 0 0 0 0 0 ( 53) HIS53 0 0 0 0 10 9 11 0 0 0 0 0 0 0 0 ( 56) SER56 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 ( 57) LEU57 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 73) LYS73 0 0 0 0 0 0 0 0 0 0 1 4 6 0 0 ( 98) ARG98 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dskppysyaqlivqaitmapdkqltlngiythitknypyyrtadkgwqNSiRHnlSLnryfikvprsqeepgKgsfwridpasesklieqafrkrrpR >2c6y_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF INTERLEUKIN ENHANCER-BINDING FACTOR 1 BOUND TO DNA organism=HOMO SAPIENS DNA sequence DG(C2):DC(D16) DT(C3):DA(D15) DT(C4):DA(D14) DG(C5):DC(D13) DT(C6):DA(D12) DA(C7):DT(D11) DA(C8):DT(D10) DA(C9):DT(D9) DC(C10):DG(D8) DA(C11):DT(D7) DA(C12):DT(D6) DT(C13):DA(D5) DA(C14):DT(D4) DC(C15):DG(D3) DA(C16):DT(D2) chainA ( 49) ASN49 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 ( 50) SER50 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 52) ARG52 0 0 0 0 0 0 0 1 5 11 0 0 0 0 0 ( 53) HIS53 0 0 0 0 10 9 11 0 0 0 0 0 0 0 0 ( 56) SER56 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 ( 57) LEU57 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 73) LYS73 0 0 0 0 0 0 0 0 0 0 1 4 6 0 0 ( 98) ARG98 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 45) LYS45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 49) ASN49 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 52) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 1 16 14 ( 53) HIS53 0 0 0 0 0 0 0 0 0 3 8 6 0 0 0 ( 56) SER56 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 prot.sequence dskppysyaqlivqaitmapdkqltlngiythitknypyyrtadkgwqNSiRHnlSLnryfikvprsqeepgKgsfwridpasesklieqafrkrrpR/dskppysyaqlivqaitmapdkqltlngiythitknypyyrtadKgwqNsiRHnlSlnryfikvprsqeepgkgsfwridpasesklieqafrkr >2c7a_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE OF THE PROGESTERONE RECEPTOR-DNA COMPLEX organism=HOMO SAPIENS DNA sequence DC(C2):DG(D18) DA(C3):DT(D17) DG(C4):DC(D16) DA(C5):DT(D15) DA(C6):DT(D14) DC(C7):DG(D13) DA(C8):DT(D12) DG(C9):DC(D11) DT(C10):DA(D10) DT(C11):DA(D9) DT(C12):DA(D8) DG(C13):DC(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DT(C17):DA(D3) DG(C18):DC(D2) chainA ( 26) LYS588 0 4 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) VAL589 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG593 0 0 0 0 1 12 15 0 0 0 0 0 0 0 0 0 0 ( 75) ARG637 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pqkiclicgdeasgchygvltcgscKVffkRamegqhnylcagrndcivdkirrkncpacrlrkccqagmvlggRkfk >2c7a_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE OF THE PROGESTERONE RECEPTOR-DNA COMPLEX organism=HOMO SAPIENS DNA sequence DC(C2):DG(D18) DA(C3):DT(D17) DG(C4):DC(D16) DA(C5):DT(D15) DA(C6):DT(D14) DC(C7):DG(D13) DA(C8):DT(D12) DG(C9):DC(D11) DT(C10):DA(D10) DT(C11):DA(D9) DT(C12):DA(D8) DG(C13):DC(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DT(C17):DA(D3) DG(C18):DC(D2) chainA ( 26) LYS588 0 4 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) VAL589 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG593 0 0 0 0 1 12 15 0 0 0 0 0 0 0 0 0 0 ( 75) ARG637 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) LYS588 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 4 0 ( 27) VAL589 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 31) ARG593 0 0 0 0 0 0 0 0 0 0 13 14 1 0 0 0 0 ( 75) ARG637 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 prot.sequence pqkiclicgdeasgchygvltcgscKVffkRamegqhnylcagrndcivdkirrkncpacrlrkccqagmvlggRkfk/pqkiclicgdeasgchygvltcgscKVffkRamegqhnylcagrndcivdkirrkncpacrlrkccqagmvlggRk >2c7o_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HHAI DNA METHYLTRANSFERASE COMPLEX WITH 13MER OLIGONUCLEOTIDE CONTAINING 2-AMINOPURINE ADJACENT TO THE TARGET BASE (PCGC:GMGC) AND SAH organism=HAEMOPHILUS HAEMOLYTICUS DNA sequence DG(C402):DC(D433) DG(C403):DC(D432) DA(C404):DT(D431) DT(C405):DA(D430) DG(C406):DC(D429) DG(C408):DG(D428) DC(C409):DC(D427) DT(C410):DA(D425) DG(C411):DC(D424) DA(C412):DT(D423) DC(C413):DG(D422) chainA ( 81) CYS81 0 0 0 0 0 0 10 0 0 0 0 ( 86) ILE86 0 0 0 0 0 0 0 4 3 0 0 ( 87) SER87 0 0 0 0 0 8 0 0 0 0 0 (119) GLU119 0 0 0 0 0 0 11 0 0 0 0 (120) ASN120 0 0 0 0 0 0 2 0 0 0 0 (121) VAL121 0 0 0 0 0 0 4 0 0 0 0 (163) ARG163 0 0 0 0 0 0 5 0 0 0 0 (165) ARG165 0 0 0 0 0 0 10 0 0 0 0 (237) GLN237 0 0 0 0 0 37 0 0 0 0 0 (240) ARG240 0 0 0 0 0 0 0 8 0 0 0 (252) SER252 0 0 0 0 0 1 0 0 0 0 0 (254) TYR254 0 0 0 0 1 0 0 0 0 0 0 (260) ALA260 0 0 0 1 0 0 0 0 0 0 0 (261) LYS261 0 0 0 1 0 0 0 0 0 0 0 (304) ASN304 0 0 0 0 0 0 4 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpCqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmENVknfashdngntlevvkntmneldysfhakvlnaldygipqkReRiymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvrlgivgkggQgeRiystrgiaitlSaYgggifAKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgNsvvinvlqyiaynigsslnfkpy >2c7p_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HHAI DNA METHYLTRANSFERASE COMPLEX WITH OLIGONUCLEOTIDE CONTAINING 2- AMINOPURINE OPPOSITE TO THE TARGET BASE (GCGC:GMPC) AND SAH organism=HAEMOPHILUS HAEMOLYTICUS DNA sequence DG(D422):DC(C413) DT(D423):DA(C412) DC(D424):DG(C411) DA(D425):DT(C410) DG(D426):DC(C409) DC(D427):DG(C406) DG(D428):DT(C405) DC(D429):DA(C404) DA(D430):DG(C403) DT(D431):DG(C402) chainA ( 81) CYS81 0 0 0 0 0 9 0 0 0 0 ( 86) ILE86 0 0 4 5 1 0 0 0 0 0 ( 87) SER87 0 0 0 0 8 0 8 0 0 0 (119) GLU119 0 0 0 0 0 11 0 0 0 0 (120) ASN120 0 0 0 0 0 1 0 0 0 0 (121) VAL121 0 0 0 0 0 4 0 0 0 0 (163) ARG163 0 0 0 0 0 5 0 0 0 0 (165) ARG165 0 0 0 0 0 9 0 0 0 0 (228) ARG228 0 0 0 1 0 0 0 0 0 0 (237) GLN237 0 0 0 0 28 0 18 0 0 0 (240) ARG240 0 0 0 8 12 0 0 0 0 0 (252) SER252 0 0 0 0 0 0 1 0 0 0 (254) TYR254 0 0 0 0 0 0 0 1 0 0 (260) ALA260 0 0 0 0 0 0 1 0 0 0 (261) LYS261 0 0 0 0 0 0 1 0 0 0 (304) ASN304 0 0 0 0 0 3 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpCqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmENVknfashdngntlevvkntmneldysfhakvlnaldygipqkReRiymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgeRiystrgiaitlSaYgggifAKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgNsvvinvlqyiaynigsslnfkpy >2c7q_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HHAI DNA METHYLTRANSFERASE COMPLEX WITH OLIGONUCLEOTIDE CONTAINING 2- AMINOPURINE OUTSIDE THE RECOGNITION SEQUENCE (PAIRED WITH G) AND SAH organism=HAEMOPHILUS HAEMOLYTICUS DNA sequence DT(C401):DC(D432) DG(C402):DG(D431) DG(C403):DC(D430) DG(C405):DC(D429) DG(C406):DG(D428) DG(C408):DC(D427) DC(C409):DG(D426) DT(C410):DA(D425) DG(C411):DC(D424) DA(C412):DT(D423) DC(C413):DG(D422) chainA ( 42) ASP42 1 0 0 0 0 0 0 0 0 0 0 ( 43) LYS43 3 0 0 0 0 0 0 0 0 0 0 ( 81) CYS81 0 0 0 0 0 12 0 0 0 0 0 ( 86) ILE86 0 0 0 0 0 0 1 2 3 0 0 ( 87) SER87 0 0 0 0 8 0 8 0 0 0 0 (119) GLU119 0 0 0 0 0 11 0 0 0 0 0 (120) ASN120 0 0 0 0 0 2 0 0 0 0 0 (121) VAL121 0 0 0 0 0 4 0 0 0 0 0 (163) ARG163 0 0 0 0 0 5 0 0 0 0 0 (165) ARG165 0 0 0 0 0 11 0 0 0 0 0 (228) ARG228 0 0 0 0 0 0 0 1 0 0 0 (237) GLN237 0 0 0 0 22 14 30 0 0 0 0 (240) ARG240 0 0 0 0 0 1 11 11 0 0 0 (254) TYR254 0 0 0 1 0 0 0 0 0 0 0 (304) ASN304 0 0 0 0 0 4 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewDKyaqevyemnfgekpegditqvnektipdhdilcagfpCqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmENVknfashdngntlevvkntmneldysfhakvlnaldygipqkReRiymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgeRiystrgiaitlsaYgggifaKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgNsvvinvlqyiaynigsslnfkpy >2c7r_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HHAI DNA METHYLTRANSFERASE (T250G MUTANT) COMPLEX WITH OLIGONUCLEOTIDE CONTAINING 2-AMINOPURINE AS A TARGET BASE (GPGC:GMGC) AND SAH organism=HAEMOPHILUS HAEMOLYTICUS DNA sequence DG(D422):DC(C413) DT(D423):DA(C412) DC(D424):DG(C411) DA(D425):DT(C410) DG(D426):DC(C409) DG(D428):DG(C408) DC(D429):DG(C406) DA(D430):DT(C405) DT(D431):DA(C404) DC(D432):DG(C403) DC(D433):DG(C402) chainA ( 86) ILE86 0 0 0 2 3 0 0 0 0 0 0 ( 87) SER87 0 0 0 0 5 7 0 0 0 0 0 (237) GLN237 0 0 0 0 31 28 0 0 0 0 0 (240) ARG240 0 0 0 13 12 0 0 0 0 0 0 (252) SER252 0 0 0 0 0 2 0 0 0 0 0 (260) ALA260 0 0 0 0 0 0 0 2 0 0 0 (261) LYS261 0 0 0 0 0 0 0 2 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvrlgivgkggQgeRiystrgiaiglSaygggifAKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy >2c9l_YZ:Leucine_zipper_domain; title=STRUCTURE OF THE EPSTEIN-BARR VIRUS ZEBRA PROTEIN organism=HUMAN HERPESVIRUS 4 DNA sequence DA(A2):DT(B119) DG(A3):DC(B118) DC(A4):DG(B117) DA(A5):DT(B116) DC(A6):DG(B115) DT(A7):DA(B114) DG(A8):DC(B113) DA(A9):DT(B112) DC(A10):DG(B111) DT(A11):DA(B110) DC(A12):DG(B109) DA(A13):DT(B108) DT(A14):DA(B107) DG(A15):DC(B106) DA(A16):DT(B105) DA(A17):DT(B104) DG(A18):DC(B103) DT(A19):DA(B102) chainY ( 9) ASN182 0 0 0 0 0 0 0 0 0 5 7 8 2 0 0 0 0 0 ( 12) ALA185 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 13) ALA186 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 ( 16) SER189 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 17) ARG190 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 chainZ ( 8) ASN182 0 0 0 0 3 8 8 5 0 0 0 0 0 0 0 0 0 0 ( 11) ALA185 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ALA186 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 15) SER189 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG190 0 0 0 0 0 0 0 6 14 18 0 0 0 0 0 0 0 0 prot.sequence mleikrykNrvAArkSRakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtpd/leikrykNrvAArkSRakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtpd >2c9l_Z:Leucine_zipper_domain; title=STRUCTURE OF THE EPSTEIN-BARR VIRUS ZEBRA PROTEIN organism=HUMAN HERPESVIRUS 4 DNA sequence DA(B102):DT(A19) DC(B103):DG(A18) DT(B104):DA(A17) DT(B105):DA(A16) DC(B106):DG(A15) DA(B107):DT(A14) DT(B108):DA(A13) DG(B109):DC(A12) DA(B110):DT(A11) DG(B111):DC(A10) DT(B112):DA(A9) DC(B113):DG(A8) DA(B114):DT(A7) DG(B115):DC(A6) DT(B116):DA(A5) DG(B117):DC(A4) DC(B118):DG(A3) DT(B119):DA(A2) chainZ ( 8) ASN182 0 0 0 0 0 0 0 0 0 0 5 8 8 3 0 0 0 0 ( 11) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 12) ALA186 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 15) SER189 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 16) ARG190 0 0 0 0 0 0 0 0 18 14 6 0 0 0 0 0 0 0 prot.sequence leikrykNrvAArkSRakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtpd >2c9n_Y:Leucine_zipper_domain; title=STRUCTURE OF THE EPSTEIN-BARR VIRUS ZEBRA PROTEIN AT APPROXIMATELY 3. 5 ANGSTROM RESOLUTION organism=HUMAN HERPESVIRUS 4 DNA sequence DA(A5):DT(B116) DC(A6):DG(B115) DT(A7):DA(B114) DG(A8):DC(B113) DA(A9):DT(B112) DC(A10):DG(B111) DT(A11):DA(B110) DC(A12):DG(B109) DA(A13):DT(B108) DT(A14):DA(B107) chainY ( 5) ASN182 0 0 0 0 0 0 6 9 8 1 ( 8) ALA185 0 0 0 0 0 0 0 0 1 2 ( 9) SER186 0 0 0 0 0 0 6 1 1 0 ( 12) CYS189 0 0 0 0 0 0 0 0 2 0 ( 13) ARG190 0 0 0 0 9 3 0 0 0 0 prot.sequence krykNrvASrkCRakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtpd >2c9n_YZ:Leucine_zipper_domain; title=STRUCTURE OF THE EPSTEIN-BARR VIRUS ZEBRA PROTEIN AT APPROXIMATELY 3. 5 ANGSTROM RESOLUTION organism=HUMAN HERPESVIRUS 4 DNA sequence DA(A5):DT(B116) DC(A6):DG(B115) DT(A7):DA(B114) DG(A8):DC(B113) DA(A9):DT(B112) DC(A10):DG(B111) DT(A11):DA(B110) DC(A12):DG(B109) DA(A13):DT(B108) DT(A14):DA(B107) chainY ( 5) ASN182 0 0 0 0 0 0 6 9 8 1 ( 8) ALA185 0 0 0 0 0 0 0 0 1 2 ( 9) SER186 0 0 0 0 0 0 6 1 1 0 ( 12) CYS189 0 0 0 0 0 0 0 0 2 0 ( 13) ARG190 0 0 0 0 9 3 0 0 0 0 chainZ ( 5) ASN182 0 1 9 10 6 0 0 0 0 0 ( 8) ALA185 0 2 1 0 0 0 0 0 0 0 ( 9) SER186 0 0 1 1 6 0 0 0 0 0 ( 12) CYS189 0 0 3 0 0 0 0 0 0 0 ( 13) ARG190 0 0 0 0 6 16 19 0 0 0 prot.sequence krykNrvASrkCRakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtpd/krykNrvASrkCRakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtpd >2cax_CD:Ribbon-helix-helix; title=STRUCTURAL BASIS FOR COOPERATIVE BINDING OF RIBBON-HELIX-HELIX REPRESSOR OMEGA TO MUTATED DIRECT DNA HEPTAD REPEATS organism=STREPTOCOCCUS PYOGENES DNA sequence DC(Y21):DG(U17) DT(Y22):DA(U16) DT(Y23):DA(U15) DG(Y24):DC(U14) DT(Y25):DA(U13) DG(Y26):DC(U12) DA(Y27):DT(U11) DC(Y28):DG(U10) DT(Y29):DA(U9) DT(Y30):DA(U8) DG(Y31):DC(U7) DT(Y32):DA(U6) DG(Y33):DC(U5) DA(Y34):DT(U4) DT(Y35):DA(U3) DT(Y36):DA(U2) DC(Y37):DG(U1) chainC ( 11) THR29 0 0 0 0 3 11 3 0 0 0 0 0 0 0 0 0 0 ( 13) ARG31 0 0 22 17 5 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ASP27 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) THR29 0 0 0 0 2 9 6 0 0 0 0 0 0 0 0 0 0 ( 7) ARG31 0 0 0 0 0 2 7 2 0 0 0 0 0 0 0 0 0 prot.sequence makkdimgdkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl/mgDkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl >2cax_D:Ribbon-helix-helix; title=STRUCTURAL BASIS FOR COOPERATIVE BINDING OF RIBBON-HELIX-HELIX REPRESSOR OMEGA TO MUTATED DIRECT DNA HEPTAD REPEATS organism=STREPTOCOCCUS PYOGENES DNA sequence DC(Y21):DG(U17) DT(Y22):DA(U16) DT(Y23):DA(U15) DG(Y24):DC(U14) DT(Y25):DA(U13) DG(Y26):DC(U12) DA(Y27):DT(U11) DC(Y28):DG(U10) DT(Y29):DA(U9) DT(Y30):DA(U8) DG(Y31):DC(U7) DT(Y32):DA(U6) DG(Y33):DC(U5) DA(Y34):DT(U4) DT(Y35):DA(U3) DT(Y36):DA(U2) DC(Y37):DG(U1) chainD ( 3) ASP27 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) THR29 0 0 0 0 2 9 6 0 0 0 0 0 0 0 0 0 0 ( 7) ARG31 0 0 0 0 0 2 7 2 0 0 0 0 0 0 0 0 0 prot.sequence mgDkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl >2ccz_AB:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF E. COLI PRIMOSOMOL PROTEIN PRIB BOUND TO SSDNA organism=ESCHERICHIA COLI DNA sequence DT(C14) DT(C13) DT(C12) DT(C11) DT(C10) DT(C1) DT(C2) DT(C3) DT(C4) DT(C5) DT(C6) DT(C7) DT(C8) DT(C9):DT(C10) chainA ( 19) ARG13 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 22) LEU16 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 24) LYS18 0 0 0 0 0 0 0 0 0 0 7 0 0 0 ( 26) SER20 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 27) PRO21 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 28) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 38) GLU32 0 5 4 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG34 0 20 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) TRP47 0 13 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) GLN49 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN85 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 95) LYS89 0 0 0 0 0 0 0 0 0 0 0 2 0 0 chainB ( 38) ARG34 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 51) TRP47 0 0 0 0 0 0 0 18 0 0 0 0 0 0 ( 86) LYS82 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 91) LEU87 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence mdpnslmtnrlvlsgtvcRapLrKvSPSgiphcqfvlEhRsvqeeagfhrqaWcQmpvivsghenqaithsitvgsritvqgfischkakNglsKmvlhaeqielidsvdklaaalehhhh/pnslmtnrlvlsgtvcraplrkvspsgiphcqfvlehRsvqeeagfhrqaWcqmpvivsghenqaithsitvgsritvqgfischKakngLskmvlhaeqielidsvdklaaalehhh >2ccz_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF E. COLI PRIMOSOMOL PROTEIN PRIB BOUND TO SSDNA organism=ESCHERICHIA COLI DNA sequence DT(C14) DT(C13) DT(C12) DT(C11) DT(C10) DT(C1) DT(C2) DT(C3) DT(C4) DT(C5) DT(C6) DT(C7) DT(C8) DT(C9):DT(C10) chainB ( 38) ARG34 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 51) TRP47 0 0 0 0 0 0 0 18 0 0 0 0 0 0 ( 86) LYS82 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 91) LEU87 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence pnslmtnrlvlsgtvcraplrkvspsgiphcqfvlehRsvqeeagfhrqaWcqmpvivsghenqaithsitvgsritvqgfischKakngLskmvlhaeqielidsvdklaaalehhh >2cdm_A:Origin_of_replication-binding_domain,_RBD-like; title=THE STRUCTURE OF TRWC COMPLEXED WITH A 27-MER DNA COMPRISING THE RECOGNITION HAIRPIN AND THE CLEAVAGE SITE organism=? DNA sequence DT(B25) DC(B24) DT(B23) DG(B22) DT(B21) DT(B20) DA(B19) DT(B18) DG(B17) DC(B16) DC(B2) DG(B3):DC(B16) DC(B4):DG(B15) DA(B5):DT(B14) DC(B6):DG(B13) DC(B7):DG(B12) DA(B11) DG(B8):DA(B10) DA(B9) chainA ( 1) MET1 0 0 4 27 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) LEU2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) SER3 7 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) HIS4 0 0 0 0 0 17 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) VAL6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 60) ALA73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 1 0 ( 62) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 6 10 4 0 0 0 0 ( 68) ARG81 0 0 0 0 0 0 0 6 11 1 0 1 0 0 0 0 0 0 0 ( 74) THR87 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) SER89 1 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) PRO91 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG128 0 0 0 0 0 0 0 0 0 4 0 9 13 14 0 0 0 0 0 (117) LYS130 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 (146) GLN159 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ASN182 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 0 (170) ASP183 0 0 0 0 0 0 0 3 12 0 0 0 0 0 0 0 0 0 0 (173) VAL186 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 0 0 (174) LYS187 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 (176) THR189 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG190 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ASP216 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) ASN218 0 0 5 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) THR236 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) ILE239 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) LEU255 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 (246) GLN259 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) LYS262 5 10 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) ARG266 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence MLSHMVltrqdigRaasfyasewqgkgaeelglsgevdskrfrellagnigeghrimrsAtRqdskeRiglDlTfSaPksvslqalvagdaeiikahdravartleqaearaqaRqKiqgktriettgnlvigkfrhetsrerdpQlhthavilnmtkrsdgqwralkNDeiVKaTRylgavynaelahelqklgyqlrygkDgNfdlahidrqqiegfskrTeqIaewyaargldpnsvsLeqkQaaKvlsRakktsvdrealraewqatakelgidfs >2cgp_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CATABOLITE GENE ACTIVATOR PROTEIN/DNA COMPLEX, ADENOSINE-3',5'-CYCLIC- MONOPHOSPHATE organism=ESCHERICHIA COLI DNA sequence DA(C534):DT(B513) DT(C535):DA(B512) DT(C536):DA(B511) DA(C537):DT(B510) DA(C538):DT(B509) DT(C539):DA(B508) DG(C540):DC(B507) DT(C541):DA(B506) DG(C542):DC(B505) DA(C543):DT(B504) DC(C544):DG(B503) chainA (172) SER179 0 0 0 0 0 0 0 0 0 2 0 (173) ARG180 0 0 0 0 0 16 8 2 0 0 0 (174) GLU181 0 0 0 0 0 0 0 8 5 6 0 (175) THR182 0 0 0 0 0 0 0 0 0 1 2 (178) ARG185 0 0 0 0 0 0 0 5 6 12 4 prot.sequence dptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcSRETvgRilkmledqnlisahgktivvyg >2crx_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=STRUCTURE OF THE HOLLIDAY JUNCTION INTERMEDIATE IN CRE-LOXP SITE- SPECIFIC RECOMBINATION organism=Enterobacteria phage P1 DNA sequence DA(D2) DT(D3) DA(D4) DA(D5) DC(D6) DT(D7) DT(D8) DC(D9) DG(D10) DT(D11) DA(D12) DT(D13) DA(D14) DG(D15) DC(D16) DA(D17) DT(D18) DA(D19) DT(D20) DG(D21) DC(D22) DT(D23) DA(D24) DT(D25) DA(D26) DC(D27) DG(D28) DA(D29) DA(D30) DG(D31) DT(D32) DT(D33) DA(D34) DT(D35) chainA ( 25) LYS43 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) MET44 0 0 0 0 0 0 0 0 0 8 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER47 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR87 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN90 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) ARG241 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) LYS244 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) SER257 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) ARG259 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tsdevrknlmdmfrdrqafsehtwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalegifeathrliygaylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnldsetgamvrlled >2cv5_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 10) VAL36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 63) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysVyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsrkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsrEiqtavrlllpgelakhavsegtkavtkytsa >2cv5_C:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Rakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >2d45_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE MECI-MECA REPRESSOR-OPERATOR COMPLEX organism=Staphylococcus aureus DNA sequence DT(F201):DA(E216) DA(F202):DT(E215) DC(F203):DG(E214) DT(F204):DA(E213) DA(F205):DT(E212) DC(F206):DG(E211) DA(F207):DT(E210) DT(F208):DA(E209) DA(F209):DT(E208) DT(F210):DA(E207) DG(F211):DC(E206) DT(F212):DA(E205) DA(F213):DT(E204) DG(F214):DC(E203) DT(F215):DA(E202) DA(F216):DT(E201) chainA ( 39) LYS43 6 11 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR44 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG46 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR47 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 44) LEU48 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG51 0 0 0 0 8 8 7 0 0 0 0 0 0 0 0 0 prot.sequence tyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrniln >2d45_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE MECI-MECA REPRESSOR-OPERATOR COMPLEX organism=Staphylococcus aureus DNA sequence DT(F201):DA(E216) DA(F202):DT(E215) DC(F203):DG(E214) DT(F204):DA(E213) DA(F205):DT(E212) DC(F206):DG(E211) DA(F207):DT(E210) DT(F208):DA(E209) DA(F209):DT(E208) DT(F210):DA(E207) DG(F211):DC(E206) DT(F212):DA(E205) DA(F213):DT(E204) DG(F214):DC(E203) DT(F215):DA(E202) DA(F216):DT(E201) chainA ( 39) LYS43 6 11 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR44 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG46 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR47 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 44) LEU48 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG51 0 0 0 0 8 8 7 0 0 0 0 0 0 0 0 0 chainB ( 41) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 1 2 3 4 ( 42) THR44 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 ( 44) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 45) THR47 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 ( 46) LEU48 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 49) ARG51 0 0 0 0 0 0 0 0 0 9 7 2 0 0 0 0 prot.sequence tyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrniln/nktyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrniln >2d45_CD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE MECI-MECA REPRESSOR-OPERATOR COMPLEX organism=Staphylococcus aureus DNA sequence DT(G201):DA(H216) DA(G202):DT(H215) DC(G203):DG(H214) DT(G204):DA(H213) DA(G205):DT(H212) DC(G206):DG(H211) DA(G207):DT(H210) DT(G208):DA(H209) DA(G209):DT(H208) DT(G210):DA(H207) DG(G211):DC(H206) DT(G212):DA(H205) chainC ( 40) THR44 0 0 0 0 0 0 0 0 0 0 0 10 ( 43) THR47 0 0 0 0 0 0 0 0 0 0 0 1 ( 44) LEU48 0 0 0 0 0 0 0 0 0 0 0 2 ( 47) ARG51 0 0 0 0 0 0 0 0 0 11 7 3 chainD ( 37) LYS43 4 3 3 1 0 0 0 0 0 0 0 0 ( 38) THR44 0 0 0 3 4 0 0 0 0 0 0 0 ( 40) ARG46 6 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR47 0 0 1 7 2 0 0 0 0 0 0 0 ( 45) ARG51 0 0 0 0 6 5 5 0 0 0 0 0 prot.sequence tyeissaewevmniiwmkkyasanniieeiqmqkdwspkTirTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrniln/eissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTlitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrniln >2d5v_B:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=CRYSTAL STRUCTURE OF HNF-6ALPHA DNA-BINDING DOMAIN IN COMPLEX WITH THE TTR PROMOTER organism=Rattus norvegicus DNA sequence DT(E2003):DA(F2026) DA(E2004):DT(F2025) DA(E2005):DT(F2024) DG(E2006):DC(F2023) DT(E2007):DA(F2022) DC(E2008):DG(F2021) DA(E2009):DT(F2020) DA(E2010):DT(F2019) DT(E2011):DA(F2018) DA(E2012):DT(F2017) DA(E2013):DT(F2016) DT(E2014):DA(F2015) chainB ( 35) SER35 0 0 0 0 0 2 6 0 0 0 0 0 ( 36) GLN36 0 0 0 0 0 0 0 0 10 20 0 0 ( 38) THR38 0 0 0 0 0 2 2 0 0 0 0 0 ( 40) SER40 0 0 0 0 0 0 0 2 5 0 0 0 ( 41) ASP41 0 0 0 0 0 0 3 0 0 0 0 0 ( 81) ARG101 0 0 0 0 0 9 8 6 0 0 0 0 (123) ASN143 0 0 0 0 3 0 0 0 0 0 0 0 (126) MET146 1 1 0 0 0 0 0 0 0 0 0 0 (127) ASN147 0 0 0 0 10 5 0 0 0 0 0 0 (130) ARG150 0 0 11 15 7 0 0 0 0 0 0 0 (131) ARG151 0 0 0 0 4 11 16 0 0 0 0 0 prot.sequence meeintkevaqrittelkrysipqaifaqrvlcrSQgTlSDllrnpkpwsklksgretfrrmwkwlqepefqrmsalrlpRlvftdvqrrtlhaifkenkrpskelqitisqqlglelstvsNffMNarRRsldk >2ddg_A:Uracil-DNA_glycosylase-like; title=CRYSTAL STRUCTURE OF URACIL-DNA GLYCOSYLASE IN COMPLEX WITH AP:G CONTAINING DNA organism=THERMUS THERMOPHILUS DNA sequence DG(D1):DC(C15) DG(D2):DC(C14) DA(D3):DT(C13) DC(D4):DG(C12) DT(D5):DA(C11) DA(D6):DT(C10) DA(D7):DT(C9) DG(D8):ORP(C8) DG(D9):DC(C7) DC(D10):DG(C6) DA(D11):DT(C5) DA(D12):DT(C4) DC(D13):DG(C3) DA(D14):DT(C2) chainA ( 31) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 3 2 ( 58) LEU58 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 75) ASP75 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 77) SER77 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (120) ASN120 0 0 0 0 0 0 0 18 0 0 0 0 0 0 (152) ARG152 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (190) HIS190 0 0 0 0 0 0 0 9 0 0 0 0 0 0 (192) SER192 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (193) ARG193 0 0 0 0 0 0 0 0 7 9 3 0 0 0 (194) GLN194 0 0 0 0 0 0 40 6 18 0 0 0 0 0 (195) ASN195 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (197) GLN197 0 0 0 0 0 0 0 0 12 6 0 0 0 0 (198) THR198 0 0 0 0 0 0 0 6 7 0 0 0 0 0 (200) ARG200 0 0 0 0 0 1 4 0 0 0 0 0 0 0 prot.sequence mdreafvqtltacrlcprlvawreevvgrkRafrgepywarpvpgfgdpearillfglapgahgsnrtgrpftgdasgaflypllheaglsskpeslpgddlrlygvyltaavrcappknkptpeelracarwtevelgllpevrvyvalgRialeallahfglrksahpfrhgahyplpggrhllasyhvsRQNtQTgRltremflevlmeakrlagl >2dem_A:Uracil-DNA_glycosylase-like; title=CRYSTAL STRUCTURE OF URACIL-DNA GLYCOSYLASE IN COMPLEX WITH AP:A CONTAINING DNA organism=THERMUS THERMOPHILUS DNA sequence DG(D1):DC(C15) DG(D2):DC(C14) DA(D3):DT(C13) DC(D4):DG(C12) DT(D5):DA(C11) DA(D6):DT(C10) DA(D7):DT(C9) DA(D8):ORP(C8) DG(D9):DC(C7) DC(D10):DG(C6) DA(D11):DT(C5) DA(D12):DT(C4) DC(D13):DG(C3) DA(D14):DT(C2) chainA ( 31) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 2 2 ( 58) LEU58 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 77) SER77 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (120) ASN120 0 0 0 0 0 0 0 18 0 0 0 0 0 0 (152) ARG152 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (190) HIS190 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (192) SER192 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (193) ARG193 0 0 0 0 0 0 0 0 7 9 3 0 0 0 (194) GLN194 0 0 0 0 0 0 40 8 18 0 0 0 0 0 (195) ASN195 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (197) GLN197 0 0 0 0 0 0 0 0 8 6 0 0 0 0 (198) THR198 0 0 0 0 0 0 0 6 9 0 0 0 0 0 (200) ARG200 0 0 0 0 0 0 2 2 0 0 0 0 0 0 prot.sequence mdreafvqtltacrlcprlvawreevvgrkRafrgepywarpvpgfgdpearillfglapgahgsnrtgrpftgdasgaflypllheaglsskpeslpgddlrlygvyltaavrcappknkptpeelracarwtevelgllpevrvyvalgRialeallahfglrksahpfrhgahyplpggrhllasyhvsRQNtQTgRltremflevlmeakrlagl >2dgc_A:Leucine_zipper_domain; title=GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DNA organism=? DNA sequence DT(B-10) DG(B-9) DG(B-8) DA(B-7) DG(B-6) DA(B-5) DT(B-4) DG(B-3) DA(B-2) DC(B-1) DG(B1) DT(B2) DC(B3) DA(B4) DT(B5) DC(B6) DT(B7) DC(B8) DC(B9) chainA ( 7) ASN235 0 0 0 0 0 0 0 0 0 0 0 5 6 3 0 0 0 0 0 ( 8) THR236 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 11) ALA239 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 15) ARG243 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 prot.sequence alkrarNTeaArrsRarklqrmkqledkveellsknyhlenevarlkkl >2dnj_A:DNase_I-like; title=DNASE I-INDUCED DNA CONFORMATION. 2 ANGSTROMS STRUCTURE OF A DNASE I- OCTAMER COMPLEX organism=BOS TAURUS DNA sequence DG(C309):DC(B308) DC(C310):DG(B307) DG(C311):DC(B306) DA(C312):DT(B305) DT(C313):DA(B304) DC(C314):DG(B303) chainA ( 9) ARG9 0 0 0 0 2 9 ( 41) ARG41 0 0 5 5 0 0 ( 76) TYR76 0 0 0 2 2 0 prot.sequence lkiaafniRTfgetkmsnatlasyivrivrrydivliqevRdshlvavgklldylnqddpntyhyvvseplgrnSYkerylflfrpnkvsvldtyqydddsfsrepavvkfsshstkvkefaivalhsapsdavaeinslydvyldvqqkwhlndvmlmgdfnadcsyvtssqwssirlrtsstfqwlipdsadttatstncaydrivvagsllqssvvpgsaapfdfqaayglsnemalaisdhypvevtlt >2dp6_A:Uracil-DNA_glycosylase-like; title=CRYSTAL STRUCTURE OF URACIL-DNA GLYCOSYLASE IN COMPLEX WITH AP:C CONTAINING DNA organism=THERMUS THERMOPHILUS DNA sequence DT(C2):DA(D14) DG(C3):DC(D13) DT(C4):DA(D12) DT(C5):DA(D11) DG(C6):DC(D10) DC(C7):DG(D9) ORP(C8):DC(D8) DT(C9):DA(D7) DT(C10):DA(D6) DA(C11):DT(D5) DG(C12):DC(D4) DT(C13):DA(D3) DC(C14):DG(D2) DC(C15):DG(D1) chainA ( 31) ARG31 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) LEU58 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 77) SER77 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (120) ASN120 0 0 0 0 0 0 17 0 0 0 0 0 0 0 (152) ARG152 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (190) HIS190 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (192) SER192 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (193) ARG193 0 0 0 3 9 14 0 0 0 0 0 0 0 0 (194) GLN194 0 0 0 0 0 30 1 22 0 0 0 0 0 0 (195) ASN195 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (197) GLN197 0 0 0 0 5 20 0 0 0 0 0 0 0 0 (198) THR198 0 0 0 0 0 18 9 0 0 0 0 0 0 0 (200) ARG200 0 0 0 0 0 0 5 2 1 0 0 0 0 0 prot.sequence mdreafvqtltacrlcprlvawreevvgrkRafrgepywarpvpgfgdpearillfglapgahgsnrtgrpftgdasgaflypllheaglsskpeslpgddlrlygvyltaavrcappknkptpeelracarwtevelgllpevrvyvalgRialeallahfglrksahpfrhgahyplpggrhllasyhvsRQNtQTgRltremflevlmeakrlagl >2dpd_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE REPLICATION TERMINATION PROTEIN IN COMPLEX WITH A PSEUDOSYMMETRIC B-SITE organism=Bacillus subtilis DNA sequence DC(E1):DG(D21) DT(E2):DA(D20) DA(E3):DT(D19) DT(E4):DA(D18) DG(E5):DC(D17) DA(E6):DT(D16) DA(E7):DT(D15) DC(E8):DG(D14) DA(E9):DT(D13) DT(E10):DA(D12) DT(E11):DA(D11) DA(E12):DT(D10) DT(E13):DA(D9) DG(E14):DC(D8) DT(E15):DA(D7) DT(E16):DA(D6) DC(E17):DG(D5) DA(E18):DT(D4) DT(E19):DA(D3) DA(E20):DT(D2) DG(E21):DC(D1) chainA ( 28) LEU35 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASN53 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) HIS54 0 0 0 1 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) THR55 0 0 0 0 0 2 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLU56 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TYR58 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG59 0 0 0 0 0 0 0 11 22 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stgflvkqraflklymitmteqerlygLkllevlrsefkeigfkpNHTEvYRslhellddgilkqikvkkegaklqevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf >2dpd_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE REPLICATION TERMINATION PROTEIN IN COMPLEX WITH A PSEUDOSYMMETRIC B-SITE organism=Bacillus subtilis DNA sequence DC(E1):DG(D21) DT(E2):DA(D20) DA(E3):DT(D19) DT(E4):DA(D18) DG(E5):DC(D17) DA(E6):DT(D16) DA(E7):DT(D15) DC(E8):DG(D14) DA(E9):DT(D13) DT(E10):DA(D12) DT(E11):DA(D11) DA(E12):DT(D10) DT(E13):DA(D9) DG(E14):DC(D8) DT(E15):DA(D7) DT(E16):DA(D6) DC(E17):DG(D5) DA(E18):DT(D4) DT(E19):DA(D3) DA(E20):DT(D2) DG(E21):DC(D1) chainA ( 28) LEU35 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASN53 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) HIS54 0 0 0 1 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) THR55 0 0 0 0 0 2 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLU56 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TYR58 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG59 0 0 0 0 0 0 0 11 22 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 30) LEU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 48) ASN53 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 ( 49) HIS54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 1 0 0 0 ( 50) THR55 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 1 0 0 0 0 0 ( 53) TYR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 ( 54) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 26 10 0 0 0 0 0 0 0 ( 78) GLN83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence stgflvkqraflklymitmteqerlygLkllevlrsefkeigfkpNHTEvYRslhellddgilkqikvkkegaklqevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf/rsstgflvkqraflklymitmteqerlygLkllevlrsefkeigfkpNHTevYRslhellddgilkqikvkkegaklQevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf >2dpi_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF HPOLI WITH DNA AND DCTP organism=Homo sapiens DNA sequence DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainA (276) SER301 0 0 1 0 0 0 (280) GLU305 1 0 0 0 0 0 (318) ARG343 0 0 0 0 1 0 prot.sequence ssrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqSfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssekhygresrqcpipshviqvmtpmvdilmklfrnmtllsvcfcnlk >2dpj_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF HPOLI WITH DNA AND DTTP organism=Homo sapiens DNA sequence DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainA (277) SER301 0 0 1 0 0 0 (281) GLU305 2 0 0 0 0 0 (319) ARG343 0 0 0 0 1 0 (337) GLN361 0 0 0 0 0 1 prot.sequence assrvivhvdldcfYaqvemisnpelkdkplgvqQkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqSfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssekhygresrQcpipshviqvmtpmvdilmklfrnmtllsvcfcnlk >2dpu_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE REPLICATION TERMINATION PROTEIN IN COMPLEX WITH A PSEUDOSYMMETRIC 21MER B-SITE DNA organism=Bacillus subtilis DNA sequence DA(D12):DT(E10) DT(D13):DA(E9) DG(D14):DC(E8) DT(D15):DA(E7) DT(D16):DA(E6) DC(D17):DG(E5) DA(D18):DT(E4) DT(D19):DA(E3) DA(D20):DT(E2) DG(D21):DC(E1) chainA ( 9) ARG16 0 7 0 0 0 0 0 0 0 0 ( 28) LEU35 0 0 0 0 0 0 1 0 0 0 ( 46) ASN53 0 0 0 2 0 0 0 0 0 0 ( 47) HIS54 0 0 0 0 4 6 1 0 0 0 ( 48) THR55 0 0 0 10 5 1 0 0 0 0 ( 51) TYR58 0 0 0 0 0 4 12 0 0 0 ( 52) ARG59 0 18 11 0 0 0 0 0 0 0 prot.sequence stgflvkqRaflklymitmteqerlygLkllevlrsefkeigfkpNHTevYRslhellddgilkqikvkkegaklqevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf >2drp_D:beta-beta-alpha_zinc_fingers; title=THE CRYSTAL STRUCTURE OF A TWO ZINC-FINGER PEPTIDE REVEALS AN EXTENSION TO THE RULES FOR ZINC-FINGER/DNA RECOGNITION organism=Drosophila melanogaster DNA sequence DT(E2):DA(F39) DA(E3):DT(F38) DA(E4):DT(F37) DT(E5):DA(F36) DA(E6):DT(F35) DA(E7):DT(F34) DG(E8):DC(F33) DG(E9):DC(F32) DA(E10):DT(F31) DT(E11):DA(F30) DA(E12):DT(F29) DA(E13):DT(F28) DC(E14):DG(F27) DG(E15):DC(F26) DT(E16):DA(F25) DC(E17):DG(F24) DC(E18):DG(F23) DG(E19):DC(F22) chainD ( 21) HIS122 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 ( 22) ILE123 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 23) SER124 0 0 0 0 0 0 0 0 0 7 6 1 0 0 0 0 0 0 ( 24) ASN125 0 0 0 0 0 0 0 10 11 2 0 0 0 0 0 0 0 0 ( 26) CYS127 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 27) ARG128 0 0 0 0 0 0 11 14 6 0 0 0 0 0 0 0 0 0 ( 51) ARG152 0 0 0 0 0 16 14 2 0 0 0 0 0 0 0 0 0 0 ( 53) ASP154 0 0 0 0 0 0 1 6 5 0 0 0 0 0 0 0 0 0 ( 54) ASN155 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eftkegehtyrckvcsrvythISNfCRhyvtshkrnvkvypcpfcfkeftRkDNmtahvkiihki >2dtu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE BETA HAIRPIN LOOP DELETION VARIANT OF RB69 GP43 IN COMPLEX WITH DNA CONTAINING AN ABASIC SITE ANALOG organism=Enterobacteria phage RB69 DNA sequence DC(E4):DG(F114) DT(E5):DA(F113) DT(E6):DA(F112) DA(E7):DT(F111) DT(E8):DA(F110) DG(E9):DC(F109) DA(E10):DT(F108) DC(E11):DG(F107) DA(E12):DT(F106) DG(E13):DC(F105) DC(E14):DG(F104) DC(E15):DG(F103) DG(E16):DC(F102) DC(E17):DG(F101) chainA (699) LYS706 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvgeiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >2dy4_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF RB69 GP43 IN COMPLEX WITH DNA CONTAINING THYMINE GLYCOL organism=Enterobacteria phage RB69 DNA sequence DG(E2):DA(F115) DG(E4):DC(F114) DG(E5):DC(F113) DA(E6):DT(F112) DA(E7):DT(F111) DT(E8):DA(F110) DG(E9):DC(F109) DC(E11):DG(F107) DA(E12):DT(F106) DG(E13):DC(F105) DC(E14):DG(F104) DC(E15):DG(F103) DG(E16):DC(F102) DC(E17):DG(F101) chainA (279) LYS279 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) PRO361 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (621) ASP621 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (622) THR622 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 6 9 0 0 0 0 0 0 0 0 0 0 0 (707) ARG707 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (800) LYS800 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygDTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKRyalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfd >2e1c_A:Dimeric_alpha+beta_barrel;"Winged_helix"_DNA-binding_domain;Dimeric_alpha+beta_barrel;Dimeric_alpha+beta_barrel; title=STRUCTURE OF PUTATIVE HTH-TYPE TRANSCRIPTIONAL REGULATOR PH1519/DNA COMPLEX organism=Pyrococcus horikoshii DNA sequence DA(B1):DT(D17) DG(B2):DC(D16) DT(B3):DA(D15) DG(B4):DC(D14) DA(B5):DT(D13) DA(B6):DT(D12) DA(B7):DT(D11) DA(B8):DT(D10) DT(B9):DA(D9) DT(B10):DA(D8) DT(B11):DA(D7) DT(B12):DA(D6) DT(B13):DA(D5) DC(B14):DG(D4) DA(B15):DT(D3) DC(B16):DG(D2) DA(B17):DT(D1) chainA ( 21) LEU44 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 ( 31) ALA54 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) GLU55 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 33) SER56 0 0 7 8 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR57 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) HIS59 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pldeidkkiikilqndgkapLreiskitglAESTiHerirklresgvikkftaiidpealgysmlafilvkvkagkysevasnlakypeivevyettgdydmvvkirtknseelnnfldligsipgvegthtmivlkthkettelpi >2e2h_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX AT 5 MM MG2+ WITH GTP organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(N3):DC(T12) DC(N4):DG(T11) DT(N5):DA(T10) DT(N6):DA(T9) DA(N7):DT(T8) DT(N8):DA(T7) DC(N9):DG(T6) DG(N11):DC(T4) DT(N12):DA(T3) DA(N13):DT(T2) DG(N14):DC(T1) chainA (142) LYS143 0 0 0 1 0 0 0 0 0 0 0 chainB chainE prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvpselvsrggcgntqptirkdglklvgswlrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqagrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekVliaqersagnivqvfkkaapspishvaeirsalekgsistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaedvdpakrirvsattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrd/qenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdrpqrkmmsfqanpteesiskfpdmgslwveftfvihiqeknfqtgifvtpsamklvpsippatietfneaalvvnithhelvpkhirlssdekreLlkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >2e2i_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH 2'-DGTP organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(N1):DG(T14) DT(N2):DA(T13) DG(N3):DC(T12) DC(N4):DG(T11) DT(N5):DA(T10) DT(N6):DA(T9) DA(N7):DT(T8) DT(N8):DA(T7) DC(N9):DG(T6) DG(N10):DC(T5) DG(N11):DC(T4) DT(N12):DA(T3) DA(N13):DT(T2) DG(N14):DC(T1) chainA (825) GLU833 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (1084) LYS1102 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaEtgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlKeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmidees >2e2i_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH 2'-DGTP organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(N1):DG(T14) DT(N2):DA(T13) DG(N3):DC(T12) DC(N4):DG(T11) DT(N5):DA(T10) DT(N6):DA(T9) DA(N7):DT(T8) DT(N8):DA(T7) DC(N9):DG(T6) DG(N10):DC(T5) DG(N11):DC(T4) DT(N12):DA(T3) DA(N13):DT(T2) DG(N14):DC(T1) chainA (825) GLU833 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (1084) LYS1102 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaEtgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlKeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmidees/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidvpgrelkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvenmklainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrdgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdveeytwssllneglveyidaeeeesiliamqpedlepaedvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkLdddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgIcglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf/qenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >2e42_AB:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER V285A MUTANT BOUND TO A HIGH AFFINITY DNA FRAGMENT organism=Homo sapiens DNA sequence DA(C2):DT(D116) DG(C3):DC(D115) DG(C4):DC(D114) DA(C5):DT(D113) DT(C6):DA(D112) DT(C7):DA(D111) DG(C8):DC(D110) DC(C9):DG(D109) DG(C10):DC(D108) DC(C11):DG(D107) DA(C12):DT(D106) DA(C13):DT(D105) DT(C14):DA(D104) DA(C15):DT(D103) DT(C16):DA(D102) chainA ( 11) ARG278 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 0 2 9 6 3 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 18) ALA285 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 22) ARG289 0 0 0 0 0 0 0 15 13 6 7 0 0 0 0 chainB ( 11) ARG278 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 ( 14) ASN281 0 0 0 2 7 7 1 0 0 0 0 0 0 0 0 ( 15) ASN282 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 17) ALA284 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 18) ALA285 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 21) SER288 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 ( 22) ARG289 0 0 0 0 0 4 4 13 1 0 0 0 0 0 0 prot.sequence dkhsdeykirRerNniAArkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk/dkhsdeykirRerNNiAArkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql >2e42_B:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER V285A MUTANT BOUND TO A HIGH AFFINITY DNA FRAGMENT organism=Homo sapiens DNA sequence DA(C2):DT(D116) DG(C3):DC(D115) DG(C4):DC(D114) DA(C5):DT(D113) DT(C6):DA(D112) DT(C7):DA(D111) DG(C8):DC(D110) DC(C9):DG(D109) DG(C10):DC(D108) DC(C11):DG(D107) DA(C12):DT(D106) DA(C13):DT(D105) DT(C14):DA(D104) DA(C15):DT(D103) DT(C16):DA(D102) chainB ( 11) ARG278 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 ( 14) ASN281 0 0 0 2 7 7 1 0 0 0 0 0 0 0 0 ( 15) ASN282 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 17) ALA284 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 18) ALA285 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 21) SER288 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 ( 22) ARG289 0 0 0 0 0 4 4 13 1 0 0 0 0 0 0 prot.sequence dkhsdeykirRerNNiAArkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql >2e43_AB:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER K269A MUTANT BOUND TO A HIGH AFFINITY DNA FRAGMENT organism=Homo sapiens DNA sequence DA(C2):DT(D116) DG(C3):DC(D115) DG(C4):DC(D114) DA(C5):DT(D113) DT(C6):DA(D112) DT(C7):DA(D111) DG(C8):DC(D110) DC(C9):DG(D109) DG(C10):DC(D108) DC(C11):DG(D107) DA(C12):DT(D106) DA(C13):DT(D105) DT(C14):DA(D104) DA(C15):DT(D103) DT(C16):DA(D102) chainA ( 8) ARG278 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 ( 11) ASN281 0 0 0 0 0 0 0 0 0 2 7 5 1 0 0 ( 14) ALA284 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 15) VAL285 0 0 0 0 0 0 0 0 0 2 4 2 0 0 0 ( 18) SER288 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 19) ARG289 0 0 0 0 0 0 0 15 13 6 2 0 0 0 0 chainB ( 8) ARG278 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 ( 11) ASN281 0 0 0 3 8 7 0 0 0 0 0 0 0 0 0 ( 12) ASN282 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 14) ALA284 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 15) VAL285 0 0 0 0 2 5 2 0 0 0 0 0 0 0 0 ( 18) SER288 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 ( 19) ARG289 0 0 0 0 0 11 7 2 0 0 0 0 0 0 0 prot.sequence sdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk/sdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql >2e43_B:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER K269A MUTANT BOUND TO A HIGH AFFINITY DNA FRAGMENT organism=Homo sapiens DNA sequence DA(D102):DT(C16) DT(D103):DA(C15) DA(D104):DT(C14) DT(D105):DA(C13) DT(D106):DA(C12) DG(D107):DC(C11) DC(D108):DG(C10) DG(D109):DC(C9) DC(D110):DG(C8) DA(D111):DT(C7) DA(D112):DT(C6) DT(D113):DA(C5) DC(D114):DG(C4) DC(D115):DG(C3) DT(D116):DA(C2) chainB ( 8) ARG278 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 ( 11) ASN281 0 0 0 0 0 0 0 0 0 7 8 3 0 0 0 ( 12) ASN282 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 14) ALA284 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 15) VAL285 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 ( 18) SER288 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 19) ARG289 0 0 0 0 0 0 0 2 7 11 0 0 0 0 0 prot.sequence sdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql >2e52_A: title=CRYSTAL STRUCTURAL ANALYSIS OF HINDIII RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNA AT 2.0 ANGSTROM RESOLUTION organism=HAEMOPHILUS INFLUENZAE DNA sequence DG(G1):DC(E12) DC(G2):DG(E11) DC(G3):DG(E10) DA(G4):DT(E9) DA(G5):DT(E8) DG(G6):DC(E7) DC(G7):DG(E6) DT(G8):DA(E5) DT(G9):DA(E4) DG(G10):DC(E3) DG(G11):DC(E2) DC(G12):DG(E1) chainA ( 56) SER56 0 0 0 0 0 0 2 5 4 0 0 0 ( 60) GLU60 0 0 0 0 0 0 0 1 0 0 0 0 ( 61) LYS61 0 0 0 0 0 0 0 1 5 1 0 0 (116) ARG116 0 0 0 0 4 10 0 0 0 0 0 0 (117) THR117 0 0 0 4 4 0 0 0 0 0 0 0 (118) ALA118 0 0 4 4 4 0 0 0 0 0 0 0 (120) ASN120 0 0 4 7 8 1 0 0 0 0 0 0 (122) LYS122 0 0 0 0 2 8 1 0 0 0 0 0 (123) ASP123 0 0 0 0 0 9 1 0 0 0 0 0 (125) LYS125 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence kksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >2e52_CD: title=CRYSTAL STRUCTURAL ANALYSIS OF HINDIII RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNA AT 2.0 ANGSTROM RESOLUTION organism=HAEMOPHILUS INFLUENZAE DNA sequence DG(H1):DC(F12) DC(H2):DG(F11) DC(H3):DG(F10) DA(H4):DT(F9) DA(H5):DT(F8) DG(H6):DC(F7) DC(H7):DG(F6) DT(H8):DA(F5) DT(H9):DA(F4) DG(H10):DC(F3) DG(H11):DC(F2) DC(H12):DG(F1) chainC ( 56) SER56 0 0 0 0 0 0 2 6 4 0 0 0 ( 60) GLU60 0 0 0 0 0 0 0 1 0 0 0 0 ( 61) LYS61 0 0 0 0 0 0 0 1 5 1 0 0 (116) ARG116 0 0 0 0 4 8 0 0 0 0 0 0 (117) THR117 0 0 0 3 4 0 0 0 0 0 0 0 (118) ALA118 0 0 4 4 4 0 0 0 0 0 0 0 (120) ASN120 0 0 4 7 8 2 0 0 0 0 0 0 (122) LYS122 0 0 0 0 1 7 1 0 0 0 0 0 (123) ASP123 0 0 0 0 0 9 1 0 0 0 0 0 chainD ( 55) SER56 0 0 0 4 7 2 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 1 0 0 0 0 0 0 0 ( 60) LYS61 0 0 1 5 1 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 0 0 9 4 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 4 4 0 0 0 (117) ALA118 0 0 0 0 0 0 0 4 4 4 0 0 (119) ASN120 0 0 0 0 0 0 2 8 7 4 0 0 (121) LYS122 0 0 0 0 0 1 9 0 0 0 0 0 (122) ASP123 0 0 0 0 0 1 9 0 0 0 0 0 (124) LYS125 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence kksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl/ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqrgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >2ea0_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI IN COMPLEX WITH AP-SITE CONTAINING DNA SUBSTRATE organism=Escherichia coli DNA sequence DC(C422):DG(B412) DA(C423):DT(B411) DG(C424):DC(B410) DG(C425):DC(B409) DA(C426):DT(B408) DG(C428):DC(B406) DA(C429):DT(B405) DA(C430):DT(B404) DG(C431):DC(B403) DC(C432):DG(B402) DC(C433):DG(B401) chainA ( 69) GLN69 0 0 0 0 0 23 0 0 0 0 0 ( 70) LEU70 0 0 0 0 11 13 0 0 0 0 0 ( 71) TYR71 0 0 0 0 10 0 0 0 0 0 0 (243) SER251 0 0 0 0 0 0 0 2 0 0 0 (244) ARG252 0 0 0 0 0 8 0 0 0 0 0 prot.sequence pegpeirraadnleaaikgkpltdvwfafpqlktyqsqligqhvthvetrgkallthfsndltlyshnQLYgvwrvvdtgeepqttrvlrvklqtadktillysasdiemlrpeqltthpflqrvgpdvldpnltpevvkerllsprfrnrqfagllldqaflaglgnylrveilwqvgltgnhkakdlnaaqldalahalleiprfsyatrgqalfrfkvfhrdgepcercgsiiekttlsSRpfywcpgcqh >2efw_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE RTP:NRB COMPLEX FROM BACILLUS SUBTILIS organism=Bacillus subtilis DNA sequence DA(D3):DT(E19) DT(D4):DA(E18) DG(D5):DC(E17) DT(D6):DA(E16) DA(D7):DT(E15) DC(D8):DG(E14) DC(D9):DG(E13) DA(D10):DT(E12) DA(D11):DT(E11) DA(D12):DT(E10) DT(D13):DA(E9) DG(D14):DC(E8) DT(D15):DA(E7) DT(D16):DA(E6) DC(D17):DG(E5) DA(D18):DT(E4) DG(D19):DC(E3) DT(D20):DA(E2) DC(D21):DG(E1) chainA ( 9) ARG16 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 28) LEU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 ( 46) ASN53 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 47) HIS54 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 4 0 0 0 ( 48) THR55 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 ( 51) TYR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 0 0 0 ( 52) ARG59 0 0 0 0 0 0 0 0 0 0 10 14 1 0 0 0 0 0 0 ( 74) LYS81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 76) GLN83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 chainB ( 9) ARG16 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) LEU38 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASN53 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) HIS54 0 6 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) THR55 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TYR58 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG59 0 0 0 0 0 11 16 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stgflvkqRaflklymitmteqerlygLkllevlrsefkeigfkpNHTevYRslhellddgilkqikvkkegaKlQevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf/stgflvkqRaflklymitmteqerlyglklLevlrsefkeigfkpNHTevYRslhellddgilkqikvkkegaklqevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf >2efw_F:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE RTP:NRB COMPLEX FROM BACILLUS SUBTILIS organism=Bacillus subtilis DNA sequence DG(J1):DC(I21) DA(J2):DT(I20) DC(J3):DG(I19) DT(J4):DA(I18) DG(J5):DC(I17) DA(J6):DT(I16) DA(J7):DT(I15) DC(J8):DG(I14) DC(I9):DT(I13) DT(J10):DA(I12) DT(J11):DA(I11) DC(I9):DA(I10) DG(J14):DC(I8) DT(J15):DA(I7) DA(J16):DT(I6) DC(J17):DG(I5) DA(J18):DT(I4) chainF ( 9) ARG16 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 28) LEU35 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASN53 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 47) HIS54 0 0 0 2 5 4 0 0 0 0 0 0 0 0 0 0 0 ( 48) THR55 0 0 0 0 0 6 8 1 0 0 0 0 0 0 0 0 0 ( 51) TYR58 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG59 0 0 0 0 0 0 8 14 2 0 0 0 0 0 0 0 0 ( 76) GLN83 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stgflvkqRaflklymitmteqerlygLkllevlrsefkeigfkpNHTevYRslhellddgilkqikvkkegaklQevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf >2efw_FG:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE RTP:NRB COMPLEX FROM BACILLUS SUBTILIS organism=Bacillus subtilis DNA sequence DT(I4):DA(J18) DG(I5):DC(J17) DT(I6):DA(J16) DA(I7):DT(J15) DC(I8):DG(J14) DC(I9):DA(I10) DA(I11):DT(J11) DA(I12):DA(I10) DT(I13):DA(J9) DG(I14):DC(J8) DT(I15):DA(J7) DT(I16):DA(J6) DC(I17):DG(J5) DA(I18):DT(J4) DG(I19):DC(J3) DT(I20):DA(J2) DC(I21):DG(J1) chainF ( 9) ARG16 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 28) LEU35 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 ( 46) ASN53 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 47) HIS54 0 0 0 0 0 0 0 0 0 0 0 4 5 2 0 0 0 ( 48) THR55 0 0 0 0 0 0 0 0 0 1 8 6 0 0 0 0 0 ( 51) TYR58 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 ( 52) ARG59 0 0 0 0 0 0 0 0 2 14 8 0 0 0 0 0 0 ( 76) GLN83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 chainG ( 46) ASN53 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) HIS54 10 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) THR55 0 2 2 13 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG59 0 0 5 0 12 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stgflvkqRaflklymitmteqerlygLkllevlrsefkeigfkpNHTevYRslhellddgilkqikvkkegaklQevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf/stgflvkqraflklymitmteqerlyglkllevlrsefkeigfkpNHTevyRslhellddgilkqikvkevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf >2er8_AB:Zn2/Cys6_DNA-binding_domain; title=CRYSTAL STRUCTURE OF LEU3 DNA-BINDING DOMAIN COMPLEXED WITH A 12MER DNA DUPLEX organism=Saccharomyces cerevisiae DNA sequence DC(E1):DG(F24) DC(E2):DG(F23) DC(E3):DG(F22) DG(E4):DC(F21) DG(E5):DC(F20) DT(E6):DA(F19) DA(E7):DT(F18) DC(E8):DG(F17) DC(E9):DG(F16) DG(E10):DC(F15) DG(E11):DC(F14) DG(E12):DC(F13) chainA ( 12) GLN43 0 0 0 0 0 0 0 0 0 0 2 0 ( 13) LYS44 0 0 0 0 0 0 0 18 16 11 0 0 ( 48) ARG79 0 0 0 0 0 0 0 0 0 0 1 1 chainB ( 11) GLN43 0 6 0 0 0 0 0 0 0 0 0 0 ( 12) LYS44 0 0 10 15 16 0 0 0 0 0 0 0 ( 43) ARG75 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence krkfacvecrqQKskcdaherapepctkcakknvpcilkrdfrrtykRarneaiekrfkeltrtltnl/rkfacvecrqQKskcdaherapepctkcakknvpcilkrdfrRtykrarneaiekrfkeltrtltnl >2er8_C:Zn2/Cys6_DNA-binding_domain; title=CRYSTAL STRUCTURE OF LEU3 DNA-BINDING DOMAIN COMPLEXED WITH A 12MER DNA DUPLEX organism=Saccharomyces cerevisiae DNA sequence DC(G1):DG(H24) DC(G2):DG(H23) DC(G3):DG(H22) DG(G4):DC(H21) DG(G5):DC(H20) DT(G6):DA(H19) DA(G7):DT(H18) DC(G8):DG(H17) DC(G9):DG(H16) DG(G10):DC(H15) DG(G11):DC(H14) DG(G12):DC(H13) chainC ( 11) GLN43 0 0 0 0 0 0 0 0 0 0 7 0 ( 12) LYS44 0 0 0 0 0 0 0 19 17 10 0 0 ( 43) ARG75 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence rkfacvecrqQKskcdaherapepctkcakknvpcilkrdfrRtykrarneaiekrfkeltrtl >2er8_CD:Zn2/Cys6_DNA-binding_domain; title=CRYSTAL STRUCTURE OF LEU3 DNA-BINDING DOMAIN COMPLEXED WITH A 12MER DNA DUPLEX organism=Saccharomyces cerevisiae DNA sequence DC(H13):DG(G12) DC(H14):DG(G11) DC(H15):DG(G10) DG(H16):DC(G9) DG(H17):DC(G8) DT(H18):DA(G7) DA(H19):DT(G6) DC(H20):DG(G5) DC(H21):DG(G4) DG(H22):DC(G3) DG(H23):DC(G2) DG(H24):DC(G1) chainC ( 11) GLN43 0 7 0 0 0 0 0 0 0 0 0 0 ( 12) LYS44 0 0 10 17 19 0 0 0 0 0 0 0 ( 43) ARG75 0 0 1 0 0 0 0 0 0 0 0 0 chainD ( 12) GLN43 0 0 0 0 0 0 0 0 0 0 7 0 ( 13) LYS44 0 0 0 0 0 0 0 16 17 10 0 0 ( 44) ARG75 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence rkfacvecrqQKskcdaherapepctkcakknvpcilkrdfrRtykrarneaiekrfkeltrtl/krkfacvecrqQKskcdaherapepctkcakknvpcilkrdfrRtYkrarneaiekrfkeltrtltnl >2ere_AB:Zn2/Cys6_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A LEU3 DNA-BINDING DOMAIN COMPLEXED WITH A 15MER DNA DUPLEX organism=Saccharomyces cerevisiae DNA sequence DT(D17):DA(C15) DG(D18):DC(C14) DC(D19):DG(C13) DC(D20):DG(C12) DG(D21):DC(C11) DG(D22):DC(C10) DT(D23):DA(C9) DA(D24):DT(C8) DC(D25):DG(C7) DC(D26):DG(C6) DG(D27):DC(C5) DG(D28):DC(C4) DC(D29):DG(C3) DA(D30):DT(C2) chainA ( 9) GLN43 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 10) LYS44 0 0 0 0 0 0 0 0 0 10 15 17 0 0 ( 36) ARG75 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 40) ARG79 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB ( 9) GLN43 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 10) LYS44 0 0 17 14 10 0 0 0 0 0 0 0 0 0 ( 36) ARG75 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 40) ARG79 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence facvecrqQKskcdahpctkcakknvpcilkrdfrRtykRarneaiekrfkeltrtltnl/facvecrqQKskcdahpctkcakknvpcilkrdfrRtykRarneaiekrfkeltrtltnl >2ere_B:Zn2/Cys6_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A LEU3 DNA-BINDING DOMAIN COMPLEXED WITH A 15MER DNA DUPLEX organism=Saccharomyces cerevisiae DNA sequence DT(D17):DA(C15) DG(D18):DC(C14) DC(D19):DG(C13) DC(D20):DG(C12) DG(D21):DC(C11) DG(D22):DC(C10) DT(D23):DA(C9) DA(D24):DT(C8) DC(D25):DG(C7) DC(D26):DG(C6) DG(D27):DC(C5) DG(D28):DC(C4) DC(D29):DG(C3) DA(D30):DT(C2) chainB ( 9) GLN43 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 10) LYS44 0 0 17 14 10 0 0 0 0 0 0 0 0 0 ( 36) ARG75 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 40) ARG79 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence facvecrqQKskcdahpctkcakknvpcilkrdfrRtykRarneaiekrfkeltrtltnl >2erg_AB:Zn2/Cys6_DNA-binding_domain; title=CRYSTAL STRUCTURE OF LEU3 DNA-BINDING DOMAIN WITH A SINGLE H50C MUTATION COMPLEXED WITH A 15MER DNA DUPLEX organism=Saccharomyces cerevisiae DNA sequence DT(D17):DA(C15) DG(D18):DC(C14) DC(D19):DG(C13) DC(D20):DG(C12) DG(D21):DC(C11) DG(D22):DC(C10) DT(D23):DA(C9) DA(D24):DT(C8) DC(D25):DG(C7) DC(D26):DG(C6) DG(D27):DC(C5) DG(D28):DC(C4) DC(D29):DG(C3) DA(D30):DT(C2) chainA ( 9) GLN43 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 10) LYS44 0 0 0 0 0 0 0 0 0 10 15 17 0 0 ( 41) ARG75 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 45) ARG79 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB ( 9) GLN43 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 10) LYS44 0 0 16 17 12 0 0 0 0 0 0 0 0 0 ( 41) ARG75 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 45) ARG79 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence facvecrqQKskcdacerapepctkcakknvpcilkrdfrRtykRarneaiekrfkeltrtltnl/facvecrqQKskcdacerapepctkcakknvpcilkrdfrRtykRarneaiekrfkeltrtltnl >2erg_B:Zn2/Cys6_DNA-binding_domain; title=CRYSTAL STRUCTURE OF LEU3 DNA-BINDING DOMAIN WITH A SINGLE H50C MUTATION COMPLEXED WITH A 15MER DNA DUPLEX organism=Saccharomyces cerevisiae DNA sequence DT(C2):DA(D30) DG(C3):DC(D29) DC(C4):DG(D28) DC(C5):DG(D27) DG(C6):DC(D26) DG(C7):DC(D25) DT(C8):DA(D24) DA(C9):DT(D23) DC(C10):DG(D22) DC(C11):DG(D21) DG(C12):DC(D20) DG(C13):DC(D19) DC(C14):DG(D18) DA(C15):DT(D17) chainB ( 9) GLN43 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 10) LYS44 0 0 0 0 0 0 0 0 0 12 17 16 0 0 ( 41) ARG75 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 45) ARG79 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence facvecrqQKskcdacerapepctkcakknvpcilkrdfrRtykRarneaiekrfkeltrtltnl >2etw_A:p53-like_transcription_factors; title=PRINCIPLES OF PROTEIN-DNA RECOGNITION REVEALED IN THE STRUCTURAL ANALYSIS OF NDT80-MSE DNA COMPLEXES organism=Saccharomyces cerevisiae DNA sequence DG(C2):DC(B14) DT(C3):DA(B13) DT(C4):DA(B12) DT(C5):DA(B11) DT(C6):DA(B10) DT(C7):DA(B9) DG(C8):DC(B8) DT(C9):DA(B7) DG(C10):DC(B6) DT(C11):DA(B5) DG(C12):DC(B4) DG(C13):DC(B3) DC(C14):DG(B2) chainA ( 25) PRO57 0 0 0 0 0 4 6 0 0 0 0 0 0 ( 26) ARG58 0 0 1 7 10 0 0 0 0 0 0 0 0 ( 79) ARG111 0 0 0 0 0 0 0 20 13 5 0 0 0 ( 80) ASN112 0 0 0 0 0 0 0 1 0 0 0 0 0 (145) ARG177 0 0 0 0 0 19 12 8 0 0 0 0 0 (146) ASP178 0 0 0 0 0 0 0 0 2 1 0 0 0 (288) ARG326 0 0 0 0 0 0 0 0 0 0 0 9 0 prot.sequence viltqlnedgttsnyfdkrklkiaPRstlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykRNyftlvstfetancdldtflkssfdllvedssvegrlrvqyfaikikaknddddteinlvqhtakRDkgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvilgavvdpdpgipydelalkngskgmfvylqemktppliirgRspsnyassq >2euv_A:p53-like_transcription_factors; title=PRINCIPLES OF PROTEIN-DNA RECOGNITION REVEALED IN THE STRUCTURAL ANALYSIS OF NDT80-MSE DNA COMPLEXES organism=Saccharomyces cerevisiae DNA sequence DG(C2):DC(B14) DT(C3):DA(B13) DA(C4):DT(B12) DT(C5):DA(B11) DT(C6):DA(B10) DT(C7):DA(B9) DG(C8):DC(B8) DT(C9):DA(B7) DG(C10):DC(B6) DT(C11):DA(B5) DT(C12):DA(B4) DG(C13):DC(B3) chainA ( 25) PRO57 0 0 0 0 0 4 6 0 0 0 0 0 ( 26) ARG58 0 0 3 8 9 0 0 0 0 0 0 0 ( 79) ARG111 0 0 0 0 0 0 0 19 12 4 0 0 ( 80) ASN112 0 0 0 0 0 0 0 1 0 0 0 0 (139) ARG177 0 0 0 0 0 20 12 8 0 0 0 0 (140) ASP178 0 0 0 0 0 0 0 0 1 0 0 0 (281) ARG326 0 0 0 0 0 0 0 0 0 0 0 6 prot.sequence viltqlnedgttsnyfdkrklkiaPRstlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykRNyftlvstfetancdldtflkssfdllvgrlrvqyfaikikaknddddteinlvqhtakRDkgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvilgavvdpdgipydelalkngskgmfvylqemktppliirgRspsnyassq >2euw_A:p53-like_transcription_factors; title=STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MA4T) organism=Saccharomyces cerevisiae DNA sequence DG(C2):DC(B14) DT(C3):DA(B13) DT(C4):DA(B12) DT(C5):DA(B11) DT(C6):DA(B10) DT(C7):DA(B9) DG(C8):DC(B8) DA(C9):DT(B7) DG(C10):DC(B6) DT(C11):DA(B5) DC(C12):DG(B4) DG(C13):DC(B3) DC(C14):DG(B2) chainA ( 25) PRO57 0 0 0 0 0 4 7 0 0 0 0 0 0 ( 26) ARG58 0 0 1 7 10 0 0 0 0 0 0 0 0 ( 79) ARG111 0 0 0 0 0 0 0 18 12 5 0 0 0 (139) ARG177 0 0 0 0 0 21 12 5 0 0 0 0 0 (140) ASP178 0 0 0 0 0 0 0 0 1 0 0 0 0 (141) LYS179 0 0 0 0 0 0 0 1 0 0 0 0 0 (281) ARG326 0 0 0 0 0 0 0 0 0 7 12 13 0 prot.sequence viltqlnedgttsnyfdkrklkiaPRstlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykRnyftlvstfetancdldtflkssfdllvgrlrvqyfaikikaknddddteinlvqhtakRDKgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvilgavvdpdgipydelalkngskgmfvylqemktppliirgRspsnyassq >2eux_A:p53-like_transcription_factors; title=STRUCTURE OF A NDT80-DNA COMPLEX (MSE VARIANT VA4G) organism=Saccharomyces cerevisiae DNA sequence DG(C2):DC(B14) DT(C3):DA(B13) DT(C4):DA(B12) DT(C5):DA(B11) DT(C6):DA(B10) DT(C7):DA(B9) DG(C8):DC(B8) DC(C9):DG(B7) DG(C10):DC(B6) DT(C11):DA(B5) DC(C12):DG(B4) DG(C13):DC(B3) DC(C14):DG(B2) chainA ( 25) PRO57 0 0 0 0 0 4 6 0 0 0 0 0 0 ( 26) ARG58 0 0 1 7 10 0 0 0 0 0 0 0 0 ( 79) ARG111 0 0 0 0 0 0 0 17 12 5 0 0 0 (139) ARG177 0 0 0 0 0 21 12 7 0 0 0 0 0 (140) ASP178 0 0 0 0 0 0 0 0 1 0 0 0 0 (281) ARG326 0 0 0 0 0 0 0 0 0 7 13 13 0 prot.sequence viltqlnedgttsnyfdkrklkiaPRstlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykRnyftlvstfetancdldtflkssfdllvgrlrvqyfaikikaknddddteinlvqhtakRDkgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvilgavvdpdgipydelalkngskgmfvylqemktppliirgRspsnyassq >2euz_A:p53-like_transcription_factors; title=STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MC5T) organism=Saccharomyces cerevisiae DNA sequence DG(C2):DC(B14) DT(C3):DA(B13) DT(C4):DA(B12) DT(C5):DA(B11) DT(C6):DA(B10) DT(C7):DA(B9) DA(C8):DT(B8) DT(C9):DA(B7) DG(C10):DC(B6) DT(C11):DA(B5) DC(C12):DG(B4) DG(C13):DC(B3) DC(C14):DG(B2) chainA ( 25) PRO57 0 0 0 0 1 4 6 0 0 0 0 0 0 ( 26) ARG58 0 0 1 7 10 0 0 0 0 0 0 0 0 ( 79) ARG111 0 0 0 0 0 0 0 18 13 5 0 0 0 ( 80) ASN112 0 0 0 0 0 0 0 1 0 0 0 0 0 (139) ARG177 0 0 0 0 0 1 2 4 0 0 0 0 0 (140) ASP178 0 0 0 0 0 0 0 0 1 0 0 0 0 (281) ARG326 0 0 0 0 0 0 0 0 0 5 11 11 0 prot.sequence viltqlnedgttsnyfdkrklkiaPRstlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykRNyftlvstfetancdldtflkssfdllvgrlrvqyfaikikaknddddteinlvqhtakRDkgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvilgavvdpdgipydelalkngskgmfvylqemktppliirgRspsnyassq >2evf_A:p53-like_transcription_factors; title=STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MA6T) organism=Saccharomyces cerevisiae DNA sequence DG(B2):DC(C14) DC(B3):DG(C13) DG(B4):DC(C12) DA(B5):DT(C11) DC(B6):DG(C10) DA(B7):DT(C9) DC(B8):DG(C8) DT(B9):DA(C7) DA(B10):DT(C6) DA(B11):DT(C5) DA(B12):DT(C4) DA(B13):DT(C3) DC(B14):DG(C2) chainA ( 25) PRO57 0 0 0 0 0 0 6 4 1 0 0 0 0 ( 26) ARG58 0 0 0 0 0 0 0 0 10 7 1 0 0 ( 79) ARG111 0 0 0 5 13 21 0 0 0 0 0 0 0 ( 80) ASN112 0 0 0 0 0 1 0 0 0 0 0 0 0 (139) ARG177 0 0 0 0 0 7 12 18 0 0 0 0 0 (140) ASP178 0 0 0 0 1 0 0 0 0 0 0 0 0 (281) ARG326 0 11 12 7 0 0 0 0 0 0 0 0 0 prot.sequence viltqlnedgttsnyfdkrklkiaPRstlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykRNyftlvstfetancdldtflkssfdllvgrlrvqyfaikikaknddddteinlvqhtakRDkgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvilgavvdpdgipydelalkngskgmfvylqemktppliirgRspsnyassq >2evg_A:p53-like_transcription_factors; title=STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MA7T) organism=Saccharomyces cerevisiae DNA sequence DG(B2):DC(C14) DC(B3):DG(C13) DG(B4):DC(C12) DA(B5):DT(C11) DC(B6):DG(C10) DA(B7):DT(C9) DC(B8):DG(C8) DA(B9):DT(C7) DT(B10):DA(C6) DA(B11):DT(C5) DA(B12):DT(C4) DA(B13):DT(C3) DC(B14):DG(C2) chainA ( 25) PRO57 0 0 0 0 0 0 6 4 0 0 0 0 0 ( 26) ARG58 0 0 0 0 0 0 0 0 11 8 1 0 0 ( 79) ARG111 0 0 0 5 13 18 0 0 0 0 0 0 0 ( 80) ASN112 0 0 0 0 0 1 0 0 0 0 0 0 0 (139) ARG177 0 0 0 0 0 6 12 21 0 0 0 0 0 (140) ASP178 0 0 0 0 1 0 0 0 0 0 0 0 0 (281) ARG326 0 11 13 7 0 0 0 0 0 0 0 0 0 prot.sequence viltqlnedgttsnyfdkrklkiaPRstlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykRNyftlvstfetancdldtflkssfdllvgrlrvqyfaikikaknddddteinlvqhtakRDkgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvilgavvdpdgipydelalkngskgmfvylqemktppliirgRspsnyassq >2evh_A:p53-like_transcription_factors; title=STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MA7G) organism=Saccharomyces cerevisiae DNA sequence DG(B2):DC(C14) DC(B3):DG(C13) DG(B4):DC(C12) DA(B5):DT(C11) DC(B6):DG(C10) DA(B7):DT(C9) DC(B8):DG(C8) DA(B9):DT(C7) DG(B10):DC(C6) DA(B11):DT(C5) DA(B12):DT(C4) DA(B13):DT(C3) DC(B14):DG(C2) chainA ( 25) PRO57 0 0 0 0 0 0 6 4 2 0 0 0 0 ( 26) ARG58 0 0 0 0 0 0 0 0 11 8 1 0 0 ( 79) ARG111 0 0 0 5 12 21 0 0 0 0 0 0 0 ( 80) ASN112 0 0 0 0 0 1 0 0 0 0 0 0 0 (139) ARG177 0 0 0 0 0 7 12 19 0 0 0 0 0 (140) ASP178 0 0 0 0 1 0 0 0 0 0 0 0 0 (281) ARG326 0 11 11 6 0 0 0 0 0 0 0 0 0 prot.sequence viltqlnedgttsnyfdkrklkiaPRstlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykRNyftlvstfetancdldtflkssfdllvgrlrvqyfaikikaknddddteinlvqhtakRDkgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvilgavvdpdgipydelalkngskgmfvylqemktppliirgRspsnyassq >2evi_A:p53-like_transcription_factors; title=STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MA8T) organism=Saccharomyces cerevisiae DNA sequence DG(B2):DC(C14) DC(B3):DG(C13) DG(B4):DC(C12) DA(B5):DT(C11) DC(B6):DG(C10) DA(B7):DT(C9) DC(B8):DG(C8) DA(B9):DT(C7) DA(B10):DT(C6) DT(B11):DA(C5) DA(B12):DT(C4) DA(B13):DT(C3) DC(B14):DG(C2) chainA ( 25) PRO57 0 0 0 0 0 0 6 4 1 0 0 0 0 ( 26) ARG58 0 0 0 0 0 0 0 0 10 6 1 0 0 ( 79) ARG111 0 0 0 5 13 20 0 0 0 0 0 0 0 ( 80) ASN112 0 0 0 0 0 1 0 0 0 0 0 0 0 (139) ARG177 0 0 0 0 0 9 12 20 0 0 0 0 0 (140) ASP178 0 0 0 0 1 0 0 0 0 0 0 0 0 (281) ARG326 0 12 12 5 0 0 0 0 0 0 0 0 0 prot.sequence viltqlnedgttsnyfdkrklkiaPRstlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykRNyftlvstfetancdldtflkssfdllvgrlrvqyfaikikaknddddteinlvqhtakRDkgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvilgavvdpdgipydelalkngskgmfvylqemktppliirgRspsnyassq >2evj_A:p53-like_transcription_factors; title=STRUCTURE OF AN NDT80-DNA COMPLEX (MSE MUTANT MA9C) organism=Saccharomyces cerevisiae DNA sequence DG(C2):DC(B14) DT(C3):DA(B13) DG(C4):DC(B12) DT(C5):DA(B11) DT(C6):DA(B10) DT(C7):DA(B9) DG(C8):DC(B8) DT(C9):DA(B7) DG(C10):DC(B6) DT(C11):DA(B5) DC(C12):DG(B4) DG(C13):DC(B3) DC(C14):DG(B2) chainA ( 25) PRO57 0 0 0 0 0 4 6 0 0 0 0 0 0 ( 26) ARG58 0 0 1 8 10 0 0 0 0 0 0 0 0 ( 79) ARG111 0 0 0 0 0 0 0 20 12 6 0 0 0 ( 80) ASN112 0 0 0 0 0 0 0 1 0 0 0 0 0 (139) ARG177 0 0 0 0 0 20 12 8 0 0 0 0 0 (140) ASP178 0 0 0 0 0 0 0 0 1 0 0 0 0 (281) ARG326 0 0 0 0 0 0 0 0 0 4 13 11 0 prot.sequence viltqlnedgttsnyfdkrklkiaPRstlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykRNyftlvstfetancdldtflkssfdllvgrlrvqyfaikikaknddddteinlvqhtakRDkgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvilgavvdpdgipydelalkngskgmfvylqemktppliirgRspsnyassq >2ewj_A:Replication_terminator_protein_Tus; title=ESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN (TUS) COMPLEXED WITH DNA- LOCKED FORM organism=Escherichia coli DNA sequence DA(C331):DT(B322) DT(C332):DA(B321) DG(C333):DC(B320) DT(C334):DA(B319) DT(C335):DA(B318) DG(C336):DC(B317) DT(C337):DA(B316) DA(C338):DT(B315) DA(C339):DT(B314) DC(C340):DG(B313) DT(C341):DA(B312) chainA ( 85) LYS89 6 6 3 0 0 0 0 0 0 0 0 ( 89) ARG93 0 0 0 0 1 0 0 0 0 0 0 (149) LEU153 0 0 2 0 0 0 0 0 0 0 0 (169) ALA173 0 0 0 0 0 0 0 0 1 0 0 (171) LYS175 0 0 0 0 0 3 9 7 1 0 0 (173) ILE177 0 0 0 7 5 0 0 0 0 0 0 (174) ILE178 0 0 0 0 0 5 1 0 0 0 0 (228) ARG232 0 21 8 0 0 0 0 0 0 0 0 (230) VAL234 0 0 0 5 4 0 0 0 0 0 0 (233) GLN237 0 0 0 0 4 0 0 0 0 0 0 (235) ILE239 0 0 0 0 0 0 0 0 0 2 0 (237) ARG241 0 0 0 0 0 0 0 0 0 4 6 (246) GLN250 0 0 0 0 0 0 0 0 0 4 13 (248) GLN252 0 0 0 0 0 0 0 6 6 1 0 (250) ALA254 0 0 0 0 0 1 0 0 0 0 0 (284) ARG288 0 0 0 0 0 0 0 0 0 0 1 (285) TYR289 0 0 0 0 0 0 0 0 0 3 5 (287) PRO291 0 0 0 0 0 0 0 0 2 0 0 prot.sequence dlvdrlnttfrqmeqelaifaahleqhkllvarvfslpevkkedehnplnrievkqhlgndaqslalrhfrhlfiqqqsenrssKaavRlpgvlcyqvdnlsqaalvshiqhinklkttfehivtveselptaarfewvhrhlpglitLnayrtltvlhdpatlrfgwAnKhIIknlhrdevlaqlekslksprsvapwtreewqrklereyqdiaalpqnaklkikRpVkvQpIaRvwykgdqkQvQhAcptplialinrdngagvpdvgellnydadnvqhRYkPqaqplrliiprlhlyvad >2ex5_A:Homing_endonucleases; title=GROUP I INTRON-ENCODED HOMING ENDONUCLEASE I-CEUI COMPLEXED WITH DNA organism=Chlamydomonas eugametos DNA sequence DC(X601):DG(Y726) DG(X602):DC(Y725) DA(X603):DT(Y724) DT(X604):DA(Y723) DA(X605):DT(Y722) DA(X606):DT(Y721) DC(X607):DG(Y720) DG(X608):DC(Y719) DG(X609):DC(Y718) DT(X610):DA(Y717) DC(X611):DG(Y716) DC(X612):DG(Y715) DT(X613):DA(Y714) DA(X614):DT(Y713) DA(X615):DT(Y712) DG(X616):DC(Y711) DG(X617):DC(Y710) DT(X618):DA(Y709) DA(X619):DT(Y708) DG(X620):DC(Y707) DC(X621):DG(Y706) DG(X622):DC(Y705) DA(X623):DT(Y704) DA(X624):DT(Y703) DG(X625):DC(Y702) DC(X626):DG(Y701) chainA ( 64) SER68 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN70 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) SER72 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LYS74 0 0 0 0 0 1 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU76 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ASP86 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) GLU88 0 0 0 0 0 0 1 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ASN90 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) THR92 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ARG114 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) LYS116 0 0 0 0 0 0 0 0 0 5 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) SER117 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) ASP128 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) GLN192 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) GLN195 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) ASN197 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ilkpgeklpqdkleelkkindavkktknfskylidlrklfqidevqvtsesklflagflegeaSlNiStKkLatskfglvvDpEfNvTrhvngvkvlylalevfktgriRhKSgsnatlvltiDnrqsleekvipfyeqyvvafsspekvkrvanfkallelfnndahqdleqlvnkilpiwdqmrkQqgQsNegfpnleaaqdfar >2ex5_AB:Homing_endonucleases; title=GROUP I INTRON-ENCODED HOMING ENDONUCLEASE I-CEUI COMPLEXED WITH DNA organism=Chlamydomonas eugametos DNA sequence DG(Y701):DC(X626) DC(Y702):DG(X625) DT(Y703):DA(X624) DT(Y704):DA(X623) DC(Y705):DG(X622) DG(Y706):DC(X621) DC(Y707):DG(X620) DT(Y708):DA(X619) DA(Y709):DT(X618) DC(Y710):DG(X617) DC(Y711):DG(X616) DT(Y712):DA(X615) DT(Y713):DA(X614) DA(Y714):DT(X613) DG(Y715):DC(X612) DG(Y716):DC(X611) DA(Y717):DT(X610) DC(Y718):DG(X609) DC(Y719):DG(X608) DG(Y720):DC(X607) DT(Y721):DA(X606) DT(Y722):DA(X605) DA(Y723):DT(X604) DT(Y724):DA(X603) DC(Y725):DG(X602) DG(Y726):DC(X601) chainA ( 64) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 66) ASN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 ( 68) SER72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 70) LYS74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 1 0 0 0 0 0 ( 72) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 82) ASP86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) GLU88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 1 0 0 0 0 0 0 ( 86) ASN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 ( 88) THR92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 (110) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (112) LYS116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 5 0 0 0 0 0 0 0 0 0 (113) SER117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 (124) ASP128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 (188) GLN192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 (191) GLN195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (193) ASN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB ( 66) ASN70 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) SER72 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LYS74 0 0 0 0 0 1 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU76 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) THR78 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) GLU88 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ASN90 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) THR92 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ARG114 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) LYS116 0 0 0 0 0 0 0 0 0 7 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) SER117 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) THR122 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) ASP128 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) GLN192 0 0 0 0 0 0 0 0 0 2 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ilkpgeklpqdkleelkkindavkktknfskylidlrklfqidevqvtsesklflagflegeaSlNiStKkLatskfglvvDpEfNvTrhvngvkvlylalevfktgriRhKSgsnatlvltiDnrqsleekvipfyeqyvvafsspekvkrvanfkallelfnndahqdleqlvnkilpiwdqmrkQqgQsNegfpnleaaqdfar/ilkpgeklpqdkleelkkindavkktknfskylidlrklfqidevqvtsesklflagflegeaslNiStKkLaTskfglvvdpEfNvTrhvngvkvlylalevfktgriRhKSgsnaTlvltiDnrqsleekvipfyeqyvvafsspekvkrvanfkallelfnndahqdleqlvnkilpiwdqmrkQqgqsnegfpnleaaqdfar >2exf_A:Retrovirus_zinc_finger-like_domains; title=SOLUTION STRUCTURE OF THE HIV-1 NUCLEOCAPSID (NCP7(12-55)) COMPLEXED WITH THE DNA (-) PRIMER BINDING SITE organism=? DNA sequence DC(B103):DG(B113) DC(B104):DG(B112) DC(B105):DG(B111) chainA ( 2) VAL13 0 0 1 ( 13) THR24 0 0 15 ( 15) ARG26 0 0 17 ( 16) ASN27 0 1 12 prot.sequence nVkcfncgkeghTaRNcraprkkgcwkcgkeghqmkdcterqan >2ezv_A: title=CRYSTAL STRUCTURE OF TETRAMERIC RESTRICTION ENDONUCLEASE SFII BOUND TO COGNATE DNA. organism=? DNA sequence DT(F4):DA(G38) DG(F5):DC(G37) DG(F6):DC(G36) DC(F7):DG(G35) DC(F8):DG(G34) DA(F9):DT(G33) DA(F10):DT(G32) DC(F11):DG(G31) DA(F12):DT(G30) DA(F13):DT(G29) DG(F14):DC(G28) DG(F15):DC(G27) DC(F16):DG(G26) DC(F17):DG(G25) DT(F18):DA(G24) chainA (106) GLU106 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (109) ARG109 13 13 4 0 0 0 0 0 0 0 0 0 0 0 0 (113) GLN113 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (206) LYS208 0 0 11 16 17 0 0 0 0 0 0 0 0 0 0 (208) SER210 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 (211) ARG213 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (213) GLU215 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 (216) ARG218 0 0 0 0 11 11 0 0 0 0 0 0 0 0 0 (218) ARG220 0 4 13 0 0 0 0 0 0 0 0 0 0 0 0 (220) TYR222 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mhqdyrelsldelesvekqtlrtivqalqqyskeaksifettaadssgevivlaeditqyalevaetypinrrfagfidykrvrwlpsphgllpqvllvdakastEknRdtlQrsqlpmdaefrntssgevvtmeagviphlmlqsandgvlpavttsifvhfyyrelkegryrelksiyvlslpharlkqrynpdpdtsffgagKhSpaRgEvaRiRvYfdrlkeacpwrlqelhysadseytqprwrdlndaghevtkeflfler >2ezv_AB: title=CRYSTAL STRUCTURE OF TETRAMERIC RESTRICTION ENDONUCLEASE SFII BOUND TO COGNATE DNA. organism=? DNA sequence DA(G24):DT(F18) DG(G25):DC(F17) DG(G26):DC(F16) DC(G27):DG(F15) DC(G28):DG(F14) DT(G29):DA(F13) DT(G30):DA(F12) DG(G31):DC(F11) DT(G32):DA(F10) DT(G33):DA(F9) DG(G34):DC(F8) DG(G35):DC(F7) DC(G36):DG(F6) DC(G37):DG(F5) DA(G38):DT(F4) chainA (106) GLU106 0 0 0 0 0 0 0 0 0 0 0 0 4 0 1 (109) ARG109 0 0 0 0 0 0 0 0 0 0 0 0 4 13 13 (113) GLN113 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (206) LYS208 0 0 0 0 0 0 0 0 0 0 17 16 11 0 0 (208) SER210 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 (211) ARG213 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (213) GLU215 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (216) ARG218 0 0 0 0 0 0 0 0 0 11 11 0 0 0 0 (218) ARG220 0 0 0 0 0 0 0 0 0 0 0 0 13 4 0 (220) TYR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainB (106) GLU106 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (208) LYS208 0 0 6 10 19 0 0 0 0 0 0 0 0 0 0 (210) SER210 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 (213) ARG213 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 (215) GLU215 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (218) ARG218 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 (220) ARG220 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 (222) TYR222 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mhqdyrelsldelesvekqtlrtivqalqqyskeaksifettaadssgevivlaeditqyalevaetypinrrfagfidykrvrwlpsphgllpqvllvdakastEknRdtlQrsqlpmdaefrntssgevvtmeagviphlmlqsandgvlpavttsifvhfyyrelkegryrelksiyvlslpharlkqrynpdpdtsffgagKhSpaRgEvaRiRvYfdrlkeacpwrlqelhysadseytqprwrdlndaghevtkeflfler/mhqdyrelsldelesvekqtlrtivqalqqyskeaksifettaadssgevivlaeditqyalevaetypinrrfagfidykrvrwlpsphgllpqvllvdakastEknrdtlqrsqlpmdaefrntssgevvtmeagviphlmlqsandgvlpavttsifvhfyyrelkdvegryrelksiyvlslpharlkqrynpdpdtsffgagKhSpaRgEvaRiRvYfdrlkeacpwrlqelhysadseytqprwrdlndaghevtkeflfler >2f03_A: title=CRYSTAL STRUCTURE OF TETRAMERIC RESTRICTION ENDONUCLEASE SFII IN COMPLEX WITH COGNATE DNA (PARTIAL BOUND FORM) organism=? DNA sequence DT(F12):DA(E10) DT(F13):DA(E9) DG(F14):DC(E8) DG(F15):DC(E7) DC(F16):DG(E6) DC(F17):DG(E5) DA(F18):DT(E4) chainA (106) GLU106 0 0 0 1 5 0 0 (108) ASN108 0 0 0 0 0 0 3 (109) ARG109 0 0 0 0 2 11 12 (113) GLN113 0 3 0 0 0 0 0 (208) LYS208 0 0 15 16 6 0 0 (210) SER210 0 0 4 4 0 0 0 (213) ARG213 0 0 7 0 0 0 0 (215) GLU215 0 1 9 0 0 0 0 (218) ARG218 0 14 10 0 0 0 0 (220) ARG220 0 0 0 0 7 2 0 (222) TYR222 0 0 0 0 0 1 1 prot.sequence mhqdyrelsldelesvekqtlrtivqalqqyskeaksifettaadssgevivlaeditqyalevaetypinrrfagfidykrvrwlpsphgllpqvllvdakastEkNRdtlQrsqlpmdaefrntssgevvtmeagviphlmlqsandgvlpavttsifvhfyyrelkdvegryrelksiyvlslpharlkqrynpdpdtsffgagKhSpaRgEvaRiRvYfdrlkeacpwrlqelhysadseytqprwrdlndaghevtkeflfler >2f5n_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM CROSSLINKED TO UNDAMAGED DNA SAMPLING A:T BASE PAIR IC1 organism=Geobacillus stearothermophilus DNA sequence DG(B2):DC(C15) DG(B3):DC(C14) DT(B4):DA(C13) DA(B5):DT(C12) DG(B6):DC(C11) DA(B7):DT(C10) DC(B8):DG(C9) DC(B9):DG(C8) DT(B10):DA(C7) DG(B11):DC(C6) DG(B12):DC(C5) DA(B13):DT(C4) DC(B14):DG(C3) chainA ( 75) ARG76 0 0 0 0 0 0 1 11 0 0 0 0 0 ( 76) MET77 0 0 0 0 0 0 0 0 4 0 0 0 0 (111) ARG112 0 0 0 0 0 0 0 0 4 15 1 0 0 (113) PHE114 0 0 0 0 0 0 0 31 21 0 0 0 0 (242) ARG264 0 0 0 0 0 0 2 6 0 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >2f5o_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM CROSSLINKED TO UNDAMAGED DNA SAMPLING G:C BASE PAIR IC3 organism=Geobacillus stearothermophilus DNA sequence DG(C3):DC(B14) DT(C4):DA(B13) DC(C5):DG(B12) DC(C6):DG(B11) DG(C7):DC(B10) DG(C8):DC(B9) DA(C9):DT(B8) DT(C10):DA(B7) DC(C11):DG(B6) DT(C12):DA(B5) DA(C13):DT(B4) DC(C14):DG(B3) DC(C15):DG(B2) chainA ( 75) ARG76 0 0 0 0 0 11 1 0 0 0 0 0 0 ( 76) MET77 0 0 0 0 6 0 0 0 0 0 0 0 0 (111) ARG112 0 0 3 13 6 0 0 0 0 0 0 0 0 (113) PHE114 0 0 0 0 20 25 0 0 0 0 0 0 0 (242) ARG264 0 0 0 0 5 7 1 0 0 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >2f5p_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM CROSSLINKED TO UNDAMAGED DNA SAMPLING A:T BASE PAIR IC2 organism=Geobacillus stearothermophilus DNA sequence DT(D3):DA(C14) DC(D4):DG(C13) DC(D5):DG(C12) DA(D6):DT(C11) DA(D7):DT(C10) DG(D8):DC(C9) DT(D9):DA(C8) DC(D10):DG(C7) DT(D11):DA(C6) DA(D12):DT(C5) DC(D13):DG(C4) DC(D14):DG(C3) chainA ( 75) ARG76 0 0 0 0 0 15 1 0 0 0 0 0 (111) ARG112 0 0 10 7 5 0 0 0 0 0 0 0 (113) PHE114 0 0 0 0 31 26 0 0 0 0 0 0 (244) ARG264 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniiRhprdseafaarmigqtvrglerrgkflkflldrdalishlRmegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >2f5q_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CATALYTICALLY INACTIVE (E3Q) MUTM CROSSLINKED TO OXOG:C CONTAINING DNA CC2 organism=Geobacillus stearothermophilus DNA sequence DT(B2):DA(C23) DA(B3):DT(C22) DG(B4):DC(C21) DA(B5):DT(C20) DC(B6):DG(C19) DC(B7):8OG(C18) DT(B8):DA(C17) DG(B9):DC(C16) DG(B10):DC(C15) DA(B11):DT(C14) chainA ( 1) PRO2 0 0 0 0 0 1 0 0 0 0 ( 2) GLN3 0 0 0 0 0 5 0 0 0 0 ( 5) GLU6 0 0 0 0 0 12 0 0 0 0 ( 75) ARG76 0 0 0 1 16 0 0 0 0 0 ( 76) MET77 0 0 0 0 20 1 0 0 0 0 ( 77) GLU78 0 0 0 0 0 2 0 0 0 0 ( 79) ARG80 0 0 0 0 0 3 0 0 0 0 (111) ARG112 0 0 0 0 2 15 40 0 0 0 (113) PHE114 0 0 0 0 76 15 0 0 0 0 (174) ILE175 0 0 0 0 0 4 0 0 0 0 (220) THR221 0 0 0 0 0 1 0 0 0 0 (221) VAL222 0 0 0 0 0 8 0 0 0 0 (222) ARG223 0 0 0 0 0 17 5 2 0 0 (223) THR224 0 0 0 0 0 4 0 0 0 0 (224) TYR225 0 0 0 0 0 9 0 0 0 0 (263) ARG264 0 0 0 5 4 0 0 0 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMEgryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkggstvRtyvntqgeagtfqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >2f5s_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CATALYTICALLY INACTIVE (E3Q) MUTM CROSSLINKED TO OXOG:C CONTAINING DNA CC1 organism=Geobacillus stearothermophilus DNA sequence DT(B1):DA(C24) DA(B2):DT(C23) DG(B3):DC(C22) DA(B4):DT(C21) DC(B5):DG(C20) DT(B6):DA(C19) DC(B7):8OG(C18) DG(B8):DC(C17) DG(B9):DC(C16) DA(B10):DT(C15) DC(B11):DG(C14) chainA ( 2) GLN3 0 0 0 0 0 0 5 0 0 0 0 ( 5) GLU6 0 0 0 0 0 0 11 0 0 0 0 ( 75) ARG76 0 0 0 0 7 14 0 0 0 0 0 ( 76) MET77 0 0 0 0 0 20 0 0 0 0 0 ( 77) GLU78 0 0 0 0 0 0 0 1 0 0 0 (111) ARG112 0 0 0 0 0 0 15 38 0 0 0 (113) PHE114 0 0 0 0 0 78 10 0 0 0 0 (174) ILE175 0 0 0 0 0 0 5 0 0 0 0 (220) THR221 0 0 0 0 0 0 2 0 0 0 0 (221) VAL222 0 0 0 0 0 0 10 0 0 0 0 (222) ARG223 0 0 0 0 0 0 3 0 0 0 0 (223) THR224 0 0 0 0 0 0 3 0 0 0 0 (224) TYR225 0 0 0 0 0 0 8 0 0 0 0 (263) ARG264 0 0 0 0 0 12 0 0 0 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMEgryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkggstvrtyvntqgeagtfqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >2f8n_ABDEFGHK:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=2.9 ANGSTROM X-RAY STRUCTURE OF HYBRID MACROH2A NUCLEOSOMES organism=MUS MUSCULUS / XENOPUS LAEVIS / HOMO SAPIENS DNA sequence DA(J146):DT(I145) DT(J147):DA(I144) DC(J148):DG(I143) DA(J149):DT(I142) DA(J150):DT(I141) DT(J151):DA(I140) DA(J152):DT(I139) DT(J153):DA(I138) DC(J154):DG(I137) DC(J155):DG(I136) DA(J156):DT(I135) DC(J157):DG(I134) DC(J158):DG(I133) DT(J159):DA(I132) DG(J160):DC(I131) DC(J161):DG(I130) DA(J162):DT(I129) DG(J163):DC(I128) DA(J164):DT(I127) DT(J165):DA(I126) DT(J166):DA(I125) DC(J167):DG(I124) DT(J168):DA(I123) DA(J169):DT(I122) DC(J170):DG(I121) DC(J171):DG(I120) DA(J172):DT(I119) DA(J173):DT(I118) DA(J174):DT(I117) DA(J175):DT(I116) DG(J176):DC(I115) DT(J177):DA(I114) DG(J178):DC(I113) DT(J179):DA(I112) DA(J180):DT(I111) DT(J181):DA(I110) DT(J182):DA(I109) DT(J183):DA(I108) DG(J184):DC(I107) DG(J185):DC(I106) DA(J186):DT(I105) DA(J187):DT(I104) DA(J188):DT(I103) DC(J189):DG(I102) DT(J190):DA(I101) DG(J191):DC(I100) DC(J192):DG(I99) DT(J193):DA(I98) DC(J194):DG(I97) DC(J195):DG(I96) DA(J196):DT(I95) DT(J197):DA(I94) DC(J198):DG(I93) DA(J199):DT(I92) DA(J200):DT(I91) DA(J201):DT(I90) DA(J202):DT(I89) DG(J203):DC(I88) DG(J204):DC(I87) DC(J205):DG(I86) DA(J206):DT(I85) DT(J207):DA(I84) DG(J208):DC(I83) DT(J209):DA(I82) DT(J210):DA(I81) DC(J211):DG(I80) DA(J212):DT(I79) DG(J213):DC(I78) DC(J214):DG(I77) DG(J215):DC(I76) DG(J216):DC(I75) DA(J217):DT(I74) DT(J218):DA(I73) DT(J219):DA(I72) DC(J220):DG(I71) DC(J221):DG(I70) DG(J222):DC(I69) DC(J223):DG(I68) DT(J224):DA(I67) DG(J225):DC(I66) DA(J226):DT(I65) DA(J227):DT(I64) DC(J228):DG(I63) DA(J229):DT(I62) DT(J230):DA(I61) DG(J231):DC(I60) DC(J232):DG(I59) DC(J233):DG(I58) DT(J234):DA(I57) DT(J235):DA(I56) DT(J236):DA(I55) DT(J237):DA(I54) DA(J239):DT(I52) DT(J240):DA(I51) DG(J242):DC(I49) DA(J243):DT(I48) DG(J244):DC(I47) DC(J245):DG(I46) DA(J246):DT(I45) DG(J247):DC(I44) DT(J248):DA(I43) DT(J249):DA(I42) DT(J250):DA(I41) DC(J252):DG(I39) DA(J253):DT(I38) DA(J254):DT(I37) DA(J255):DT(I36) DT(J256):DA(I35) DA(J257):DT(I34) DC(J258):DG(I33) DA(J259):DT(I32) DC(J260):DG(I31) DT(J261):DA(I30) DT(J262):DA(I29) DT(J263):DA(I28) DT(J264):DA(I27) DG(J266):DC(I26) DT(J267):DA(I24) DA(J268):DT(I23) DG(J269):DC(I22) DA(J270):DT(I21) DA(J271):DT(I20) DT(J272):DA(I19) DC(J273):DG(I18) DT(J274):DA(I17) DG(J275):DC(I16) DC(J276):DG(I15) DA(J277):DT(I14) DG(J278):DC(I13) DG(J279):DC(I12) DT(J280):DA(I11) DG(J281):DC(I10) DG(J282):DC(I9) DA(J283):DT(I8) DT(J284):DA(I7) DA(J285):DT(I6) DT(J286):DA(I5) DT(J287):DA(I4) DG(J288):DC(I3) DA(J289):DT(I2) DT(J290):DA(I1) chainA ( 2) HIS439 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainD ( 1) ARG1230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainH ( 7) ILE1436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 3) LYS1014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG1042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dNIqgitkpairrlarrggvkrisgliYeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/Rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytssk/pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rKVlrdniqgitkpairrlarrggvkrIsgliyeetrgvlkvfleNvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/stKtsrsakagvifpvgrmlryikkghpkyRigvgapvymaavleyltaeilelavnaardnkkgrvtprhillavandeelnqllkgvtiasggvlpnihpellakk/rkesyaIyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >2f8n_D:Histone-fold; title=2.9 ANGSTROM X-RAY STRUCTURE OF HYBRID MACROH2A NUCLEOSOMES organism=MUS MUSCULUS DNA sequence DA(I1):DT(J290) DT(I2):DA(J289) DC(I3):DG(J288) DA(I4):DT(J287) DA(I5):DT(J286) DT(I6):DA(J285) DA(I7):DT(J284) DT(I8):DA(J283) DC(I9):DG(J282) DC(I10):DG(J281) DA(I11):DT(J280) DC(I12):DG(J279) DC(I13):DG(J278) DT(I14):DA(J277) DG(I15):DC(J276) DC(I16):DG(J275) DA(I17):DT(J274) DG(I18):DC(J273) DA(I19):DT(J272) DT(I20):DA(J271) DT(I21):DA(J270) DC(I22):DG(J269) DT(I23):DA(J268) DA(I24):DT(J267) DC(I26):DG(J266) DA(I27):DT(J264) DA(I28):DT(J263) DA(I29):DT(J262) DA(I30):DT(J261) DG(I31):DC(J260) DT(I32):DA(J259) DG(I33):DC(J258) DT(I34):DA(J257) DA(I35):DT(J256) DT(I36):DA(J255) DT(I37):DA(J254) DT(I38):DA(J253) DG(I39):DC(J252) DA(I41):DT(J250) DA(I42):DT(J249) DA(I43):DT(J248) DC(I44):DG(J247) DT(I45):DA(J246) DG(I46):DC(J245) DC(I47):DG(J244) DT(I48):DA(J243) DC(I49):DG(J242) DA(I51):DT(J240) DT(I52):DA(J239) DA(I54):DT(J237) DA(I55):DT(J236) DA(I56):DT(J235) DA(I57):DT(J234) DG(I58):DC(J233) DG(I59):DC(J232) DC(I60):DG(J231) DA(I61):DT(J230) DT(I62):DA(J229) DG(I63):DC(J228) DT(I64):DA(J227) DT(I65):DA(J226) DC(I66):DG(J225) DA(I67):DT(J224) DG(I68):DC(J223) DC(I69):DG(J222) DG(I70):DC(J221) DG(I71):DC(J220) DA(I72):DT(J219) DA(I73):DT(J218) DT(I74):DA(J217) DC(I75):DG(J216) DC(I76):DG(J215) DG(I77):DC(J214) DC(I78):DG(J213) DT(I79):DA(J212) DG(I80):DC(J211) DA(I81):DT(J210) DA(I82):DT(J209) DC(I83):DG(J208) DA(I84):DT(J207) DT(I85):DA(J206) DG(I86):DC(J205) DC(I87):DG(J204) DC(I88):DG(J203) DT(I89):DA(J202) DT(I90):DA(J201) DT(I91):DA(J200) DT(I92):DA(J199) DG(I93):DC(J198) DA(I94):DT(J197) DT(I95):DA(J196) DG(I96):DC(J195) DG(I97):DC(J194) DA(I98):DT(J193) DG(I99):DC(J192) DC(I100):DG(J191) DA(I101):DT(J190) DG(I102):DC(J189) DT(I103):DA(J188) DT(I104):DA(J187) DT(I105):DA(J186) DC(I106):DG(J185) DC(I107):DG(J184) DA(I108):DT(J183) DA(I109):DT(J182) DA(I110):DT(J181) DT(I111):DA(J180) DA(I112):DT(J179) DC(I113):DG(J178) DA(I114):DT(J177) DC(I115):DG(J176) DT(I116):DA(J175) DT(I117):DA(J174) DT(I118):DA(J173) DT(I119):DA(J172) DG(I120):DC(J171) DG(I121):DC(J170) DT(I122):DA(J169) DA(I123):DT(J168) DG(I124):DC(J167) DA(I125):DT(J166) DA(I126):DT(J165) DT(I127):DA(J164) DC(I128):DG(J163) DT(I129):DA(J162) DG(I130):DC(J161) DC(I131):DG(J160) DA(I132):DT(J159) DG(I133):DC(J158) DG(I134):DC(J157) DT(I135):DA(J156) DG(I136):DC(J155) DG(I137):DC(J154) DA(I138):DT(J153) DT(I139):DA(J152) DA(I140):DT(J151) DT(I141):DA(J150) DT(I142):DA(J149) DG(I143):DC(J148) DA(I144):DT(J147) DT(I145):DA(J146) chainD ( 1) ARG1230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytssk >2f8x_C:p53-like_transcription_factors;DNA-binding_protein_LAG-1_CSL;E_set_domains; title=CRYSTAL STRUCTURE OF ACTIVATED NOTCH, CSL AND MAML ON HES-1 PROMOTER DNA SEQUENCE organism=HOMO SAPIENS DNA sequence DT(Y101):DA(X17) DT(Y102):DA(X16) DT(Y103):DA(X15) DC(Y104):DG(X14) DT(Y105):DA(X13) DT(Y106):DA(X12) DT(Y107):DA(X11) DC(Y108):DG(X10) DC(Y109):DG(X9) DC(Y110):DG(X8) DA(Y111):DT(X7) DC(Y112):DG(X6) DA(Y113):DT(X5) DG(Y114):DC(X4) DT(Y115):DA(X3) DA(Y116):DT(X2) DA(Y117):DT(X1) DC(Y118):DG(X0) chainC ( 36) TYR46 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLU49 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 41) ARG51 0 0 0 0 0 0 0 0 2 7 10 0 0 0 0 0 0 0 (141) SER151 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 (142) LYS152 0 0 0 0 0 2 9 8 0 0 0 0 0 0 0 0 0 0 (171) SER181 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (172) GLN182 0 0 0 0 0 0 0 0 0 0 0 4 6 1 0 0 0 0 prot.sequence rpppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskkkqslknadlciasgtkvalfnrlrSQtvstrylhveggnfhassqqwgaffihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkepnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlngggdvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgiiystsltftytpep >2fcc_B:T4_endonuclease_V; title=CRYSTAL STRUCTURE OF T4 PYRIMIDINE DIMER GLYCOSYLASE (T4-PDG) COVALENTLY COMPLEXED WITH A DNA SUBSTRATE CONTAINING ABASIC SITE organism=Enterobacteria phage T4 DNA sequence DC(E201):DG(F226) DC(E202):DG(F225) DA(E203):DC(F223) DG(E204):DC(F222) DG(E205):DA(F220) DA(E206):DC(F219) DG(E208):DC(F216) DA(E209):DG(F215) DA(E210):DG(F214) chainB ( 1) THR2 0 0 0 0 0 1 4 0 0 ( 17) MET18 0 0 0 1 0 0 0 0 0 ( 20) TYR21 0 0 0 0 10 0 0 0 0 ( 21) ARG22 0 0 0 0 0 3 0 0 0 ( 24) PRO25 0 0 0 0 11 0 0 0 0 ( 25) ARG26 0 0 0 0 0 15 2 0 0 ( 70) GLN71 0 0 0 0 7 0 0 0 0 ( 74) ILE75 0 0 0 0 1 0 0 0 0 ( 86) ASP87 0 0 0 0 31 0 0 0 0 ( 90) GLN91 0 0 0 0 1 0 0 0 0 (127) TRP128 0 0 0 1 2 0 0 0 0 prot.sequence TrinltlvseladqhlMaeYRelPRvfgavrkhvangkrvrdfkisptfilgaghvtffydkleflrkrQielIaeclkrgfnikDttvQdisdipqefrgdyipheasiaisqarldekiaqrptWykyygkaiya >2fdc_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURAL BASIS OF DNA DAMAGE RECOGNITION AND PROCESSING BY UVRB: CRYSTAL STRUCTURE OF A UVRB/DNA COMPLEX organism=Bacillus caldotenax DNA sequence DC(C1):DG(C17) DG(C2):DC(C16) DG(C3):DC(C15) DC(C4):DA(C14) chainB ( 91) SER91 1 0 0 0 ( 93) TYR93 3 0 0 0 ( 96) TYR96 44 0 0 0 ( 97) GLN97 7 0 0 0 ( 98) PRO98 24 0 0 0 (146) TYR146 0 2 0 0 (346) GLN346 0 0 0 2 (350) MET350 0 0 5 1 (357) ARG357 6 0 0 0 prot.sequence vegrfqlvapyepqgdqpqaiaklvdglrrgvkhqtllgatgtgktftisnviaqvnkptlviahnktlagqlyselkeffphnaveyfvSyYdyYQPeayvpqtdtyiekdakindeidklrhsatsalferrdviivasvsciYglgspeeyrelvvslrvgmeiernallrrlvdiqydrndidfrrgtfrvrgdvveifpasrdehcirveffgdeierirevdaltgevlgerehvaifpashfvtreekmrlaiqnieqeleerlaelraqgklleaqrleqrtrydlemmremgfcsgienysrhlalrppgstpytlldyfpddfliivdeshvtlpQlrgMyngdraRkqvlvdhgfrlpsaldnrpltfeefeqkinqiiyvsatpgpyelehspgvveqiirptglldptidvrptkgqiddligeirervernertlvttltkkmaedltdylkeagikvaylhieiirdlrlgkydvlvginllregldipevslvaildadkegflrsersliqtigraarnanghvimyadtitksmeiaiqetkrrraiqeeynrkhgivprtvkkeir >2ff0_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=SOLUTION STRUCTURE OF STEROIDOGENIC FACTOR 1 DNA BINDING DOMAIN BOUND TO ITS TARGET SEQUENCE IN THE INHIBIN ALPHA-SUBUNIT PROMOTER organism=MUS MUSCULUS DNA sequence DG(B1):DC(C30) DG(B2):DC(C29) DC(B3):DG(C28) DT(B4):DA(C27) DC(B5):DG(C26) DA(B6):DT(C25) DG(B7):DC(C24) DG(B8):DC(C23) DG(B9):DC(C22) DC(B10):DG(C21) DC(B11):DG(C20) DA(B12):DT(C19) DC(B13):DG(C18) DA(B14):DT(C17) DG(B15):DC(C16) chainA ( 22) GLU31 0 0 0 0 0 0 0 2 11 4 0 0 0 0 0 ( 25) LYS34 0 0 0 0 0 0 2 11 5 0 0 0 0 0 0 ( 29) LYS38 0 0 0 0 0 0 0 4 6 2 0 0 0 0 0 ( 30) ARG39 0 0 0 0 0 0 0 0 0 0 9 15 0 0 0 ( 80) ARG89 0 0 0 0 0 3 12 14 0 0 0 0 0 0 0 ( 83) ARG92 0 0 3 15 12 2 0 0 0 0 0 0 0 0 0 prot.sequence delcpvcgdkvsgyhyglltcEscKgffKRtvqnnkhytctesqsckidktqrkrcpfcrfqkcltvgmrleavradrmRggRnkfgpmykrdralkqqkka >2fio_A: title=PHAGE PHI29 TRANSCRIPTION REGULATOR P4-DNA COMPLEX organism=Bacillus phage phi29 DNA sequence DT(D1):DA(C41) DA(D2):DT(C40) DA(D3):DT(C39) DC(D4):DG(C38) DT(D5):DA(C37) DT(D6):DA(C36) DT(D7):DA(C35) DT(D8):DA(C34) DT(D9):DA(C33) DG(D10):DC(C32) DC(D11):DG(C31) DA(D12):DT(C30) DA(D13):DT(C29) DG(D14):DC(C28) DA(D15):DT(C27) DC(D16):DG(C26) DT(D17):DA(C25) DT(D18):DA(C24) DT(D19):DA(C23) DT(D20):DA(C22) DT(D21):DA(C21) DT(D22):DA(C20) DA(D23):DT(C19) DT(D24):DA(C18) DA(D25):DT(C17) DA(D26):DT(C16) DA(D27):DT(C15) DA(D28):DT(C14) DT(D29):DA(C13) DG(D30):DC(C12) DT(D31):DA(C11) DT(D32):DA(C10) DG(D33):DC(C9) DA(D34):DT(C8) DC(D35):DG(C7) DG(D36):DC(C6) DT(D37):DA(C5) DT(D38):DA(C4) DT(D39):DA(C3) DT(D40):DA(C2) DT(D41):DA(C1) chainA ( 4) GLN5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 5 0 0 0 0 0 0 0 0 ( 5) ARG6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 17 4 0 0 0 0 0 0 0 0 0 0 prot.sequence pktQRgiyhnlkeseyvasntdvtfffsselylnkfldgyqeyrkkfnkkiervavtpwnmdmladitfysevekrgfhawlkgdnatwrevhvyalrimtkpntldwsriqkprlrerrksm >2fio_AB: title=PHAGE PHI29 TRANSCRIPTION REGULATOR P4-DNA COMPLEX organism=Bacillus phage phi29 DNA sequence DA(C1):DT(D41) DA(C2):DT(D40) DA(C3):DT(D39) DA(C4):DT(D38) DA(C5):DT(D37) DC(C6):DG(D36) DG(C7):DC(D35) DT(C8):DA(D34) DC(C9):DG(D33) DA(C10):DT(D32) DA(C11):DT(D31) DC(C12):DG(D30) DA(C13):DT(D29) DT(C14):DA(D28) DT(C15):DA(D27) DT(C16):DA(D26) DT(C17):DA(D25) DA(C18):DT(D24) DT(C19):DA(D23) DA(C20):DT(D22) DA(C21):DT(D21) DA(C22):DT(D20) DA(C23):DT(D19) DA(C24):DT(D18) DA(C25):DT(D17) DG(C26):DC(D16) DT(C27):DA(D15) DC(C28):DG(D14) DT(C29):DA(D13) DT(C30):DA(D12) DG(C31):DC(D11) DC(C32):DG(D10) DA(C33):DT(D9) DA(C34):DT(D8) DA(C35):DT(D7) DA(C36):DT(D6) DA(C37):DT(D5) DG(C38):DC(D4) DT(C39):DA(D3) DT(C40):DA(D2) DA(C41):DT(D1) chainA ( 4) GLN5 0 0 0 0 0 0 0 0 5 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG6 0 0 0 0 0 0 0 0 0 0 4 17 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 4) GLN5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 7 ( 5) ARG6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 17 7 0 0 prot.sequence pktQRgiyhnlkeseyvasntdvtfffsselylnkfldgyqeyrkkfnkkiervavtpwnmdmladitfysevekrgfhawlkgdnatwrevhvyalrimtkpntldwsriqkprlrerrksm/pktQRgiyhnlkeseyvasntdvtfffsselylnkfldgyqeyrkkfnkkiervavtpwnmdmladitfysevekrgfhawlkgdnatwrevhvyalrimtkpntldwsriqk >2fj7_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE CONTAINING A POLY (DA.DT) SEQUENCE ELEMENT organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J294) DT(I2):DA(J293) DC(I3):DG(J292) DA(I4):DT(J291) DA(I5):DT(J290) DT(I6):DA(J289) DA(I7):DT(J288) DT(I8):DA(J287) DC(I9):DG(J286) DC(I10):DG(J285) DA(I11):DT(J284) DC(I12):DG(J283) DC(I13):DG(J282) DT(I14):DA(J281) DG(I15):DC(J280) DC(I16):DG(J279) DA(I17):DT(J278) DC(I18):DG(J277) DA(I19):DT(J276) DT(I20):DA(J275) DT(I21):DA(J274) DC(I22):DG(J273) DT(I23):DA(J272) DA(I24):DT(J271) DC(I25):DG(J270) DC(I26):DG(J269) DA(I27):DT(J268) DA(I28):DT(J267) DA(I29):DT(J266) DA(I30):DT(J265) DG(I31):DC(J264) DT(I32):DA(J263) DG(I33):DC(J262) DT(I34):DA(J261) DC(I35):DG(J260) DA(I36):DT(J259) DA(I37):DT(J258) DA(I38):DT(J257) DA(I39):DT(J256) DA(I40):DT(J255) DA(I41):DT(J254) DA(I42):DT(J253) DA(I43):DT(J252) DA(I44):DT(J251) DA(I45):DT(J250) DA(I46):DT(J249) DA(I47):DT(J248) DA(I48):DT(J247) DA(I49):DT(J246) DA(I50):DT(J245) DA(I51):DT(J244) DT(I52):DA(J243) DC(I53):DG(J242) DA(I54):DT(J241) DT(I55):DA(J240) DG(I56):DC(J239) DA(I57):DT(J238) DT(I58):DA(J237) DA(I59):DT(J236) DA(I60):DT(J235) DG(I61):DC(J234) DC(I62):DG(J233) DT(I63):DA(J232) DA(I64):DT(J231) DA(I65):DT(J230) DT(I66):DA(J229) DT(I67):DA(J228) DT(I68):DA(J227) DG(I69):DC(J226) DG(I70):DC(J225) DC(I71):DG(J224) DT(I72):DA(J223) DG(I73):DC(J222) DA(I74):DT(J221) DC(I75):DG(J220) DT(I76):DA(J219) DC(I77):DG(J218) DA(I78):DT(J217) DG(I79):DC(J216) DC(I80):DG(J215) DT(I81):DA(J214) DG(I82):DC(J213) DA(I83):DT(J212) DA(I84):DT(J211) DC(I85):DG(J210) DA(I86):DT(J209) DT(I87):DA(J208) DG(I88):DC(J207) DC(I89):DG(J206) DC(I90):DG(J205) DT(I91):DA(J204) DT(I92):DA(J203) DT(I93):DA(J202) DT(I94):DA(J201) DG(I95):DC(J200) DA(I96):DT(J199) DT(I97):DA(J198) DG(I98):DC(J197) DG(I99):DC(J196) DA(I100):DT(J195) DG(I101):DC(J194) DC(I102):DG(J193) DA(I103):DT(J192) DG(I104):DC(J191) DT(I105):DA(J190) DT(I106):DA(J189) DT(I107):DA(J188) DC(I108):DG(J187) DC(I109):DG(J186) DA(I110):DT(J185) DA(I111):DT(J184) DA(I112):DT(J183) DT(I113):DA(J182) DA(I114):DT(J181) DC(I115):DG(J180) DA(I116):DT(J179) DC(I117):DG(J178) DT(I118):DA(J177) DT(I119):DA(J176) DT(I120):DA(J175) DT(I121):DA(J174) DG(I122):DC(J173) DG(I123):DC(J172) DT(I124):DA(J171) DA(I125):DT(J170) DG(I126):DC(J169) DT(I127):DA(J168) DA(I128):DT(J167) DT(I129):DA(J166) DC(I130):DG(J165) DT(I131):DA(J164) DG(I132):DC(J163) DC(I133):DG(J162) DA(I134):DT(J161) DG(I135):DC(J160) DG(I136):DC(J159) DT(I137):DA(J158) DG(I138):DC(J157) DG(I139):DC(J156) DA(I140):DT(J155) DT(I141):DA(J154) DA(I142):DT(J153) DT(I143):DA(J152) DT(I144):DA(J151) DG(I145):DC(J150) DA(I146):DT(J149) DT(I147):DA(J148) chainA ( 2) HIS39 0 0 2 5 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 8) LYS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 1) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHryrpgtvalreirryqkstelliRklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitKPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssrAGlqfpvgrvhrllRkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/RkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkRstitsreiqtavrlllpgelakhavsegtkavtkytsak/pHRyrPgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/rkesyaiyvykvlkqvhpdtgisskamsImnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >2fj7_B:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE CONTAINING A POLY (DA.DT) SEQUENCE ELEMENT organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J294) DT(I2):DA(J293) DC(I3):DG(J292) DA(I4):DT(J291) DA(I5):DT(J290) DT(I6):DA(J289) DA(I7):DT(J288) DT(I8):DA(J287) DC(I9):DG(J286) DC(I10):DG(J285) DA(I11):DT(J284) DC(I12):DG(J283) DC(I13):DG(J282) DT(I14):DA(J281) DG(I15):DC(J280) DC(I16):DG(J279) DA(I17):DT(J278) DC(I18):DG(J277) DA(I19):DT(J276) DT(I20):DA(J275) DT(I21):DA(J274) DC(I22):DG(J273) DT(I23):DA(J272) DA(I24):DT(J271) DC(I25):DG(J270) DC(I26):DG(J269) DA(I27):DT(J268) DA(I28):DT(J267) DA(I29):DT(J266) DA(I30):DT(J265) DG(I31):DC(J264) DT(I32):DA(J263) DG(I33):DC(J262) DT(I34):DA(J261) DC(I35):DG(J260) DA(I36):DT(J259) DA(I37):DT(J258) DA(I38):DT(J257) DA(I39):DT(J256) DA(I40):DT(J255) DA(I41):DT(J254) DA(I42):DT(J253) DA(I43):DT(J252) DA(I44):DT(J251) DA(I45):DT(J250) DA(I46):DT(J249) DA(I47):DT(J248) DA(I48):DT(J247) DA(I49):DT(J246) DA(I50):DT(J245) DA(I51):DT(J244) DT(I52):DA(J243) DC(I53):DG(J242) DA(I54):DT(J241) DT(I55):DA(J240) DG(I56):DC(J239) DA(I57):DT(J238) DT(I58):DA(J237) DA(I59):DT(J236) DA(I60):DT(J235) DG(I61):DC(J234) DC(I62):DG(J233) DT(I63):DA(J232) DA(I64):DT(J231) DA(I65):DT(J230) DT(I66):DA(J229) DT(I67):DA(J228) DT(I68):DA(J227) DG(I69):DC(J226) DG(I70):DC(J225) DC(I71):DG(J224) DT(I72):DA(J223) DG(I73):DC(J222) DA(I74):DT(J221) DC(I75):DG(J220) DT(I76):DA(J219) DC(I77):DG(J218) DA(I78):DT(J217) DG(I79):DC(J216) DC(I80):DG(J215) DT(I81):DA(J214) DG(I82):DC(J213) DA(I83):DT(J212) DA(I84):DT(J211) DC(I85):DG(J210) DA(I86):DT(J209) DT(I87):DA(J208) DG(I88):DC(J207) DC(I89):DG(J206) DC(I90):DG(J205) DT(I91):DA(J204) DT(I92):DA(J203) DT(I93):DA(J202) DT(I94):DA(J201) DG(I95):DC(J200) DA(I96):DT(J199) DT(I97):DA(J198) DG(I98):DC(J197) DG(I99):DC(J196) DA(I100):DT(J195) DG(I101):DC(J194) DC(I102):DG(J193) DA(I103):DT(J192) DG(I104):DC(J191) DT(I105):DA(J190) DT(I106):DA(J189) DT(I107):DA(J188) DC(I108):DG(J187) DC(I109):DG(J186) DA(I110):DT(J185) DA(I111):DT(J184) DA(I112):DT(J183) DT(I113):DA(J182) DA(I114):DT(J181) DC(I115):DG(J180) DA(I116):DT(J179) DC(I117):DG(J178) DT(I118):DA(J177) DT(I119):DA(J176) DT(I120):DA(J175) DT(I121):DA(J174) DG(I122):DC(J173) DG(I123):DC(J172) DT(I124):DA(J171) DA(I125):DT(J170) DG(I126):DC(J169) DT(I127):DA(J168) DA(I128):DT(J167) DT(I129):DA(J166) DC(I130):DG(J165) DT(I131):DA(J164) DG(I132):DC(J163) DC(I133):DG(J162) DA(I134):DT(J161) DG(I135):DC(J160) DG(I136):DC(J159) DT(I137):DA(J158) DG(I138):DC(J157) DG(I139):DC(J156) DA(I140):DT(J155) DT(I141):DA(J154) DA(I142):DT(J153) DT(I143):DA(J152) DT(I144):DA(J151) DG(I145):DC(J150) DA(I146):DT(J149) DT(I147):DA(J148) chainB ( 8) LYS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dniqgitKPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >2fjv_A:DNA/RNA_polymerases; title=RT29 BOUND TO D(CTTAATTCGAATTAAG) IN COMPLEX WITH MMLV RT CATALYTIC FRAGMENT organism=Moloney murine leukemia virus DNA sequence DC(B1):DG(G16) DT(B2):DA(G15) DT(B3):DA(G14) DA(B4):DT(G13) DA(B5):DT(G12) DT(B6):DA(G11) DT(B7):DA(G10) DC(B8):DG(G9) chainA ( 41) TYR64 7 0 0 0 0 0 0 0 ( 76) LEU99 22 0 0 0 0 0 0 0 ( 91) ASP114 10 0 0 0 0 0 0 0 ( 93) ARG116 7 7 3 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >2fjw_A:DNA/RNA_polymerases; title=D(CTTGAATGCATTCAAG) IN COMPLEX WITH MMLV RT CATALYTIC FRAGMENT organism=Moloney murine leukemia virus DNA sequence DC(B1):DG(G16) DT(B2):DA(G15) DT(B3):DA(G14) DG(B4):DC(G13) DA(B5):DT(G12) DA(B6):DT(G11) DT(B7):DA(G10) DG(B8):DC(G9) chainA ( 41) TYR64 7 0 0 0 0 0 0 0 ( 76) LEU99 21 0 0 0 0 0 0 0 ( 91) ASP114 13 0 0 0 0 0 0 0 ( 93) ARG116 7 8 3 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >2fjx_A:DNA/RNA_polymerases; title=RT29 BOUND TO D(CTTGAATGCATTCAAG) IN COMPLEX WITH MMLV RT CATALYTIC FRAGMENT organism=Moloney murine leukemia virus DNA sequence DC(G9):DG(B8) DA(G10):DT(B7) DT(G11):DA(B6) DT(G12):DA(B5) DC(G13):DG(B4) DA(G14):DT(B3) DA(G15):DT(B2) DG(G16):DC(B1) chainA ( 41) TYR64 0 0 0 0 0 0 0 6 ( 76) LEU99 0 0 0 0 0 0 0 19 ( 89) VAL112 0 0 0 0 0 0 0 2 ( 91) ASP114 0 0 0 0 0 0 0 11 ( 93) ARG116 0 0 0 0 0 4 9 7 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >2fkc_A:LuxS/MPP-like_metallohydrolase; title=CRYSTAL FORM I OF PRE-REACTIVE COMPLEX OF RESTRICTION ENDONUCLEASE HINP1I WITH COGNATE DNA AND CALCIUM ION organism=HAEMOPHILUS INFLUENZAE DNA sequence DC(D11):DG(C10) DC(D12):DG(C9) DA(D13):DT(C8) DG(D14):DC(C7) DC(D15):DG(C6) DG(D16):DC(C5) DC(D17):DG(C4) DT(D18):DA(C3) DG(D19):DC(C2) DG(D20):DC(C1) chainA ( 10) THR10 0 0 0 0 3 3 0 0 0 0 ( 11) ALA11 0 0 0 0 0 3 3 0 0 0 ( 15) PHE15 0 0 0 0 0 0 3 5 0 0 ( 87) ASN87 0 0 3 0 0 0 0 0 0 0 ( 91) PHE91 0 0 36 16 0 0 0 0 0 0 ( 93) GLN93 0 0 0 0 2 10 5 0 0 0 ( 96) LYS96 0 0 0 0 0 0 11 0 0 0 (210) ARG210 5 7 0 0 0 0 0 0 0 0 (221) GLN221 0 0 0 6 0 0 0 0 0 0 (223) LYS223 0 0 0 0 6 9 3 0 0 0 (226) ASP226 0 0 0 0 0 5 7 0 0 0 (229) ARG229 0 0 0 0 0 0 1 0 0 0 (236) GLN236 0 0 0 0 9 1 0 0 0 0 (238) LYS238 0 0 0 8 8 0 0 0 0 0 prot.sequence mnlvelgskTAkdgFknekdiadrfenwkenseaqdwlvtmghnldeiksvkavvlsgyksdinvqvlvfykdaldihniqvklvsNkrgFnQidKhwlahyqemwkfddnllrilrhftgelppyhsntkdkrrmfmtefsqeeqnivlnwleknrvlvltdilrgrgdfaaewvlvaqkvsnnarwilrninevlqhygsgdislspRgsinfgrvtiQrKggDngRetanmlQfKidptelfdi >2fkh_B:LuxS/MPP-like_metallohydrolase; title=CRYSTAL FORM II OF PRE-REACTIVE COMPLEX OF RESTRICTION ENDONUCLEASE HINP1I WITH COGNATE DNA AND CALCIUM IONS organism=HAEMOPHILUS INFLUENZAE DNA sequence DC(F11):DG(E10) DC(F12):DG(E9) DA(F13):DT(E8) DG(F14):DC(E7) DC(F15):DG(E6) DG(F16):DC(E5) DC(F17):DG(E4) DT(F18):DA(E3) DG(F19):DC(E2) DG(F20):DC(E1) chainB ( 10) THR10 0 0 0 0 2 3 0 0 0 0 ( 11) ALA11 0 0 0 0 0 3 6 0 0 0 ( 15) PHE15 0 0 0 0 0 0 4 7 0 0 ( 87) ASN87 0 0 5 0 0 0 0 0 0 0 ( 91) PHE91 0 0 35 17 0 0 0 0 0 0 ( 93) GLN93 0 0 0 0 4 12 16 0 0 0 ( 96) LYS96 0 0 0 0 0 0 24 4 0 0 (210) ARG210 2 2 0 0 0 0 0 0 0 0 (221) GLN221 0 0 0 6 1 0 0 0 0 0 (223) LYS223 0 0 0 0 7 8 6 0 0 0 (226) ASP226 0 0 0 0 0 2 16 0 0 0 (229) ARG229 0 0 0 0 0 0 4 0 0 0 (231) THR231 0 0 0 0 0 0 0 4 0 0 (234) MET234 0 0 0 0 0 0 0 3 0 0 (236) GLN236 0 0 0 0 6 1 0 0 0 0 (238) LYS238 0 0 0 7 10 0 0 0 0 0 prot.sequence mnlvelgskTAkdgFknekdiadrfenwkenseaqdwlvtmghnldeiksvkavvlsgyksdinvqvlvfykdaldihniqvklvsNkrgFnQidKhwlahyqemwkfddnllrilrhftgelppyhsntkdkrrmfmtefsqeeqnivlnwleknrvlvltdilrgrgdfaaewvlvaqkvsnnarwilrninevlqhygsgdislspRgsinfgrvtiQrKggDngReTanMlQfKidptelfdi >2fl3_A:LuxS/MPP-like_metallohydrolase; title=BINARY COMPLEX OF RESTRICTION ENDONUCLEASE HINP1I WITH COGNATE DNA organism=HAEMOPHILUS INFLUENZAE DNA sequence DC(D11):DG(C10) DC(D12):DG(C9) DA(D13):DT(C8) DG(D14):DC(C7) DC(D15):DG(C6) DG(D16):DC(C5) DC(D17):DG(C4) DT(D18):DA(C3) DG(D19):DC(C2) DG(D20):DC(C1) chainA ( 10) THR10 0 0 0 0 1 2 0 0 0 0 ( 11) ALA11 0 0 0 0 0 4 3 0 0 0 ( 15) PHE15 0 0 0 0 0 0 3 2 0 0 ( 87) ASN87 0 0 4 0 0 0 0 0 0 0 ( 91) PHE91 0 0 28 15 0 0 0 0 0 0 ( 93) GLN93 0 0 0 0 2 8 3 0 0 0 ( 96) LYS96 0 0 0 0 0 0 10 0 0 0 (210) ARG210 3 6 0 0 0 0 0 0 0 0 (221) GLN221 0 0 0 6 1 0 0 0 0 0 (223) LYS223 0 0 0 0 8 7 3 0 0 0 (226) ASP226 0 0 0 0 0 4 6 0 0 0 (229) ARG229 0 0 0 0 0 0 2 0 0 0 (236) GLN236 0 0 0 0 7 1 0 0 0 0 (238) LYS238 0 0 0 7 8 0 0 0 0 0 prot.sequence mnlvelgskTAkdgFknekdiadrfenwkenseaqdwlvtmghnldeiksvkavvlsgyksdinvqvlvfykdaldihniqvklvsNkrgFnQidKhwlahyqemwkfddnllrilrhftgelppyhsntkdkrrmfmtefsqeeqnivlnwleknrvlvltdilrgrgdfaaewvlvaqkvsnnarwilrninevlqhygsgdislspRgsinfgrvtiQrKggDngRetanmlQfKidptelfdi >2flc_A:LuxS/MPP-like_metallohydrolase; title=POST-REACTIVE COMPLEX OF RESTRICTION ENDONUCLEASE HINP1I WITH NICKED COGNATE DNA AND MAGNESIUM IONS organism=Haemophilus influenzae DNA sequence DC(E11):DG(D10) DC(E12):DG(D9) DA(E13):DT(D8) DG(E14):DC(D7) DC(E15):DG(D6) DG(E16):DC(D5) DC(E17):DG(C4) DT(E18):DA(C3) DG(E19):DC(C2) DG(E20):DC(C1) chainA ( 10) THR10 0 0 0 1 2 2 0 0 0 0 ( 11) ALA11 0 0 0 0 0 4 2 0 0 0 ( 15) PHE15 0 0 0 0 0 0 0 2 0 0 ( 87) ASN87 0 0 3 0 0 0 0 0 0 0 ( 91) PHE91 0 0 28 15 0 0 0 0 0 0 ( 92) ASN92 0 0 0 0 2 0 0 0 0 0 ( 93) GLN93 0 0 0 0 1 10 7 0 0 0 ( 96) LYS96 0 0 0 0 0 0 9 1 0 0 (210) ARG210 5 8 0 0 0 0 0 0 0 0 (221) GLN221 0 0 0 7 1 0 0 0 0 0 (223) LYS223 0 0 0 0 5 7 2 0 0 0 (226) ASP226 0 0 0 0 0 6 5 0 0 0 (236) GLN236 0 0 0 0 7 1 0 0 0 0 (238) LYS238 0 0 0 7 6 0 0 0 0 0 prot.sequence mnlvelgskTAkdgFknekdiadrfenwkenseaqdwlvtmghnldeiksvkavvlsgyksdinvqvlvfykdaldihniqvklvsNkrgFNQidKhwlahyqemwkfddnllrilrhftgelppyhsntkdkrrmfmtefsqeeqnivlnwleknrvlvltdilrgrgdfaaewvlvaqkvsnnarwilrninevlqhygsgdislspRgsinfgrvtiQrKggDngretanmlQfKidptelfdi >2fld_AB:Homing_endonucleases; title=I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY organism=Monomastix sp. DNA sequence DG(C501):DC(D574) DC(C502):DG(D573) DA(C503):DT(D572) DG(C504):DC(D571) DA(C505):DT(D570) DA(C506):DT(D569) DG(C507):DC(D568) DG(C508):DC(D567) DT(C509):DA(D566) DC(C510):DG(D565) DG(C511):DC(D564) DT(C512):DA(D563) DG(C513):DC(D562) DA(C514):DT(D561) DG(C515):DC(D560) DA(C516):DT(D559) DC(C517):DG(D558) DC(C518):DG(D557) DG(C519):DC(D556) DT(C520):DA(D555) DT(C521):DA(D554) DC(C522):DG(D553) DC(C523):DG(D552) DG(C524):DC(D551) chainA ( 19) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 ( 23) LEU28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 27) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 ( 29) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 30) TYR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 ( 36) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 44) ILE49 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 ( 65) ASN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 14 0 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 ( 78) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 10 0 0 0 0 0 chainB ( 19) SER224 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR226 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LEU228 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ILE230 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG232 0 0 14 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASP234 4 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) TYR235 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN241 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE249 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ASN270 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG272 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG275 0 0 0 0 0 0 0 0 15 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASP277 0 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ILE279 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG283 0 0 0 0 0 12 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tlqpteaayiagfldgdgSiYaLlipRpDYkdikyQvslaisfIqrkdkfpylqdiydqlgkrgNlRkdRgDgIaDyRiigsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki/tlqpteaayiagfldgdgSiYaLlIpRpDYkdikyQvslaisfIqrkdkfpylqdiydqlgkrgNlRkdRgDgIaDyRiigsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagkies >2fld_B:Homing_endonucleases; title=I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY organism=Monomastix sp. DNA sequence DG(C501):DC(D574) DC(C502):DG(D573) DA(C503):DT(D572) DG(C504):DC(D571) DA(C505):DT(D570) DA(C506):DT(D569) DG(C507):DC(D568) DG(C508):DC(D567) DT(C509):DA(D566) DC(C510):DG(D565) DG(C511):DC(D564) DT(C512):DA(D563) DG(C513):DC(D562) DA(C514):DT(D561) DG(C515):DC(D560) DA(C516):DT(D559) DC(C517):DG(D558) DC(C518):DG(D557) DG(C519):DC(D556) DT(C520):DA(D555) DT(C521):DA(D554) DC(C522):DG(D553) DC(C523):DG(D552) DG(C524):DC(D551) chainB ( 19) SER224 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR226 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LEU228 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ILE230 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG232 0 0 14 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASP234 4 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) TYR235 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN241 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE249 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ASN270 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG272 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG275 0 0 0 0 0 0 0 0 15 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASP277 0 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ILE279 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG283 0 0 0 0 0 12 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tlqpteaayiagfldgdgSiYaLlIpRpDYkdikyQvslaisfIqrkdkfpylqdiydqlgkrgNlRkdRgDgIaDyRiigsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagkies >2fll_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF HUMAN DNA POLYMERASE IOTA WITH DNA AND DTTP organism=Homo sapiens DNA sequence DA(P867):DT(T847) DG(P868):DC(T846) DG(P869):DC(T845) DA(P870):DT(T844) DC(P871):DG(T843) DC(P872):DG(T842) DOC(P873):DG(T841) TTP(A875):DA(T840) chainA ( 10) ASP34 0 0 0 0 0 0 0 7 ( 12) ASP36 0 0 0 0 0 0 0 1 ( 13) CYS37 0 0 0 0 0 0 0 3 ( 14) PHE38 0 0 0 0 0 0 0 1 ( 15) TYR39 0 0 0 0 0 0 1 3 ( 35) GLN59 0 0 0 0 0 0 0 5 ( 38) LEU62 0 0 0 0 0 0 0 2 ( 40) VAL64 0 0 0 0 0 0 0 7 ( 41) THR65 0 0 0 0 0 0 0 4 ( 44) TYR68 0 0 0 0 0 0 0 4 ( 47) ARG71 0 0 0 0 0 0 0 10 ( 53) LYS77 0 0 0 0 0 0 0 11 ( 54) LEU78 0 0 0 0 0 0 0 5 (102) ASP126 0 0 0 0 0 0 0 6 (103) GLU127 0 0 0 0 0 0 0 1 (190) LYS214 0 0 0 0 0 0 0 4 (277) SER301 0 0 0 1 0 0 0 0 (281) GLU305 0 0 0 0 0 2 5 0 (319) ARG343 0 1 0 0 0 0 0 0 (337) GLN361 1 0 0 0 0 0 0 0 prot.sequence assrvivhvdldcfYaqvemisnpelkdkplgvqQkyLvVtcnyearklgvkkLmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqSfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssekhygresrQcpipshviqvmtpmvdilmklfrnmtllsvcfcnlk >2fln_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=BINARY COMPLEX OF CATALYTIC CORE OF HUMAN DNA POLYMERASE IOTA WITH DNA (TEMPLATE A) organism=Homo sapiens DNA sequence DG(T841):DOC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainA ( 14) TYR39 1 0 0 0 0 0 0 (276) SER301 0 0 0 1 0 0 0 (280) GLU305 4 2 0 0 0 0 0 (330) GLN361 0 0 0 0 0 0 2 prot.sequence ssrvivhvdldcfYaqvemisnpelkdkplgvqQkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqSfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirrygresrQcpipshviqvmtpmvdilmklfrnmtllsvcfcnlk >2flp_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=BINARY COMPLEX OF THE CATALYTIC CORE OF HUMAN DNA POLYMERASE IOTA WITH DNA (TEMPLATE G) organism=Homo sapiens DNA sequence DG(T841):DOC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainA ( 14) TYR39 1 0 0 0 0 0 0 (280) GLU305 4 2 0 0 0 0 0 (331) GLN361 0 0 0 0 0 0 2 prot.sequence ssrvivhvdldcfYaqvemisnpelkdkplgvqQkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirryygresrQcpipshviqvmtpmvdilmklfrnmtllsvcfcnlk >2fmp_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;DNA_polymerase_beta-like,_second_domain; title=DNA POLYMERASE BETA WITH A TERMINATED GAPPED DNA SUBSTRATE AND DDCTP WITH SODIUM IN THE CATALYTIC SITE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 37 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >2fmq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=SODIUM IN ACTIVE SITE OF DNA POLYMERASE BETA organism=Homo sapiens DNA sequence DG(D1):DC(B5) DT(D2):DA(B4) DC(D3):DG(B3) DG(D4):DC(B2) DG(D5):DC(B1) chainA ( 25) HIS34 39 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >2fms_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA WITH A GAPPED DNA SUBSTRATE AND DUMPNPP WITH MAGNESIUM IN THE CATALYTIC SITE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 34 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >2fo1_A:DNA-binding_protein_LAG-1_CSL;p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF THE CSL-NOTCH-MASTERMIND TERNARY COMPLEX BOUND TO DNA organism=CAENORHABDITIS ELEGANS DNA sequence DA(B3):DT(C15) DC(B4):DG(C14) DT(B5):DA(C13) DG(B6):DC(C12) DT(B7):DA(C11) DG(B8):DC(C10) DG(B9):DC(C9) DG(B10):DC(C8) DA(B11):DT(C7) DA(B12):DT(C6) DA(B13):DT(C5) DG(B14):DC(C4) DA(B15):DT(C3) chainA ( 35) TYR229 0 0 0 0 0 0 0 1 9 0 0 0 0 ( 38) GLU232 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 40) ARG234 0 0 0 0 6 11 2 0 0 0 0 0 0 (156) SER367 0 0 0 0 0 0 0 0 2 4 0 0 0 (157) LYS368 0 0 0 0 0 0 0 5 9 3 0 0 0 (182) SER400 0 0 0 5 2 0 0 0 0 0 0 0 0 (183) GLN401 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence vqsltsdrmidflsnkekyecvisifhakvaqksYgnEkRffcpppciyligqgwklkkdrvaqlyktlkasaiheqqatelvayigigsdtserqqldfstgkvrhpniydycaaktlyisdsdkrkyfdlnaqffygcgmeiggfvsqrikviSKpskkdckylciasgtkvalfnrlrSQtvstrylhvegnafhasstkwgaftihlfddednfavrdgfvyygsvvklvdsvtgialprlrirkvdkqqvildascseepvsqlhkcafqmidnelvylclshdkiiqhqatainehrhqindgaawtiistdkaeyrffeamgqvanpispcpvvgslevdghgeasrvelhgrdfkpnlkvwfgatpvettfrseeslhcsippvsqvrneqthwmftnrttgdvevpislvrddgvvyssgltfsyksler >2fqz_AB:Restriction_endonuclease-like; title=METAL-DEPLETED ECL18KI IN COMPLEX WITH UNCLEAVED DNA organism=ENTEROBACTER CLOACAE DNA sequence DC(E-4):DG(F4) DG(E-3):DC(F3) DC(E-2):DG(F2) DC(E-1):DG(F1) DG(E1):DC(F-1) DG(E2):DC(F-2) DG(E3):DC(F-3) DC(E4):DG(F-4) chainA (111) GLN114 0 0 25 11 0 0 0 0 (114) ARG117 0 0 0 5 5 0 0 0 (115) SER118 1 7 3 0 0 0 0 0 (172) THR184 0 0 0 0 2 0 0 0 (174) ARG186 0 0 0 0 23 19 3 0 (175) GLU187 0 0 0 0 8 9 3 0 (176) ARG188 0 0 0 14 18 0 0 0 chainB (111) GLN114 0 0 0 0 11 25 0 0 (114) ARG117 0 0 0 5 7 2 0 0 (115) SER118 0 0 0 0 0 3 8 2 (172) THR184 0 0 0 2 0 0 0 0 (174) ARG186 0 2 20 21 0 0 0 0 (175) GLU187 0 2 10 8 0 0 0 0 (176) ARG188 0 0 0 18 15 0 0 0 prot.sequence lspgefktliskerkshfitpfalvyktfcdlgydqknsdyflnnpseyiiamrkncwkefepfekefttrmlsylideerikdmspydairdftmeypthiydlalsntQsrRSragkefesilellmmgagipvdvqgaiigklvdlvmpgvvqytsnkrntmlisaktTlRERwqevpeevnrtgiremylatlddsfseetinilyeanvvvvttvenknfkyknnnrvltfedmlqsamelsrkwnnvsytdsekeeiqqsilkqiekysdfpyvvnyyrnrlsa/lspgefktliskerkshfitpfalvyktfcdlgydqknsdyflnnpseyiiamrkncwkefepfekefttrmlsylideerikdmspydairdftmeypthiydlalsntQsrRSragkefesilellmmgagipvdvqgaiigklvdlvmpgvvqytsnkrntmlisaktTlRERwqevpeevnrtgiremylatlddsfseetinilyeanvvvvttvenknfkyknnnrvltfedmlqsamelsrkwnnvsytdsekeeiqqsilkqiekysdfpyvvnyyrnrlsalfd >2fqz_C:Restriction_endonuclease-like; title=METAL-DEPLETED ECL18KI IN COMPLEX WITH UNCLEAVED DNA organism=ENTEROBACTER CLOACAE DNA sequence DG(H-4):DC(G4) DC(H-3):DG(G3) DC(H-2):DG(G2) DC(H-1):DG(G1) DG(H1):DC(G-1) DG(H2):DC(G-2) DC(H3):DG(G-3) DG(H4):DC(G-4) chainC (111) GLN114 0 0 0 0 11 25 0 0 (114) ARG117 0 0 0 7 9 2 0 0 (115) SER118 0 0 0 0 0 3 6 2 (172) THR184 0 0 0 2 0 0 0 0 (174) ARG186 0 4 19 22 0 0 0 0 (175) GLU187 0 3 7 8 0 0 0 0 (176) ARG188 0 0 0 17 15 0 0 0 prot.sequence lspgefktliskerkshfitpfalvyktfcdlgydqknsdyflnnpseyiiamrkncwkefepfekefttrmlsylideerikdmspydairdftmeypthiydlalsntQsrRSragkefesilellmmgagipvdvqgaiigklvdlvmpgvvqytsnkrntmlisaktTlRERwqevpeevnrtgiremylatlddsfseetinilyeanvvvvttvenknfkyknnnrvltfedmlqsamelsrkwnnvsytdsekeeiqqsilkqiekysdfpyvvnyyrnrlsalf >2fqz_CD:Restriction_endonuclease-like; title=METAL-DEPLETED ECL18KI IN COMPLEX WITH UNCLEAVED DNA organism=ENTEROBACTER CLOACAE DNA sequence DG(H-4):DC(G4) DC(H-3):DG(G3) DC(H-2):DG(G2) DC(H-1):DG(G1) DG(H1):DC(G-1) DG(H2):DC(G-2) DC(H3):DG(G-3) DG(H4):DC(G-4) chainC (111) GLN114 0 0 0 0 11 25 0 0 (114) ARG117 0 0 0 7 9 2 0 0 (115) SER118 0 0 0 0 0 3 6 2 (172) THR184 0 0 0 2 0 0 0 0 (174) ARG186 0 4 19 22 0 0 0 0 (175) GLU187 0 3 7 8 0 0 0 0 (176) ARG188 0 0 0 17 15 0 0 0 chainD (111) GLN114 0 0 25 11 0 0 0 0 (114) ARG117 0 0 0 8 6 0 0 0 (115) SER118 3 8 3 0 0 0 0 0 (172) THR184 0 0 0 0 2 0 0 0 (174) ARG186 0 0 0 0 21 17 2 0 (175) GLU187 0 0 0 0 8 11 3 0 (176) ARG188 0 0 0 14 19 0 0 0 prot.sequence lspgefktliskerkshfitpfalvyktfcdlgydqknsdyflnnpseyiiamrkncwkefepfekefttrmlsylideerikdmspydairdftmeypthiydlalsntQsrRSragkefesilellmmgagipvdvqgaiigklvdlvmpgvvqytsnkrntmlisaktTlRERwqevpeevnrtgiremylatlddsfseetinilyeanvvvvttvenknfkyknnnrvltfedmlqsamelsrkwnnvsytdsekeeiqqsilkqiekysdfpyvvnyyrnrlsalf/lspgefktliskerkshfitpfalvyktfcdlgydqknsdyflnnpseyiiamrkncwkefepfekefttrmlsylideerikdmspydairdftmeypthiydlalsntQsrRSragkefesilellmmgagipvdvqgaiigklvdlvmpgvvqytsnkrntmlisaktTlRERwqevpeevnrtgiremylatlddsfseetinilyeanvvvvttvenknfkyknnnrvltfedmlqsamelsrkwnnvsytdsekeeiqqsilkqiekysdfpyvvnyyrnrlsalf >2fr4_B:Immunoglobulin; title=STRUCTURE OF FAB DNA-1 COMPLEXED WITH A STEM-LOOP DNA LIGAND organism=MUS MUSCULUS DNA sequence DG(N14):DC(N9) DG(M7):DC(N8) DC(M8):DG(N7) DC(M9):DG(M14) chainB (102) ARG98 0 0 0 34 (104) TYR100 0 0 0 22 prot.sequence qvkllesgpelvkpgasvkmsckasgytftsyvmhwvkqkpgqglewigyinpyndgtkynekfkgkatltsdkssstaymelssltsedsavyycvrggyRpyyaMdywgqgtsvtvssakttppsvyplapgsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivpr >2fr4_BH:Immunoglobulin; title=STRUCTURE OF FAB DNA-1 COMPLEXED WITH A STEM-LOOP DNA LIGAND organism=MUS MUSCULUS DNA sequence DG(M14):DC(M9) DG(N7):DC(M8) DC(N8):DG(M7) DC(N9):DG(N14) chainH (102) ARG98 0 0 0 26 (104) TYR100 0 0 0 20 chainB (102) ARG98 34 0 0 0 (104) TYR100 22 0 0 0 prot.sequence qvkllesgpelvkpgasvkmsckasgytftsyvmhwvkqkpgqglewigyinpyndgtkynekfkgkatltsdkssstaymelssltsedsavyycvrggyRpyyaMdywgqgtsvtvssakttppsvyplapgsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivpr/qvkllesgpelvkpgasvkmsckasgytftsyvmhwvkqkpgqglewigyinpyndgtkynekfkgkatltsdkssstaymelssltsedsavyycvrggyRpyyaMdywgqgtsvtvssakttppsvyplapnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivpr >2fr4_L:Immunoglobulin; title=STRUCTURE OF FAB DNA-1 COMPLEXED WITH A STEM-LOOP DNA LIGAND organism=MUS MUSCULUS DNA sequence DC(N5) DT(N6) DG(N7) DC(N8) DC(N9):DG(N14) DT(N10) DT(N11) DC(N12) DA(N13) chainL ( 31) TYR32 0 0 0 0 0 43 0 0 0 ( 48) TYR49 0 0 0 0 0 0 25 0 0 ( 49) ASN50 0 0 0 0 0 0 4 0 0 ( 55) GLU56 0 0 0 0 0 0 0 5 0 ( 90) HIS91 0 0 0 0 0 6 5 0 0 ( 91) TYR92 0 0 0 0 0 5 0 0 0 prot.sequence lqmtqspaslsasvgetvtitcraseniysYlawyqqkqgkspqllvYNaktlaEgvpsrfsgsgsgtqfslkinslqpedfgsyycqhHYgtpltfgagtklelkradaaptvsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltltkdeyerhnsytceathktstspivksfnrne >2fvp_A:DNA/RNA_polymerases; title=A STRUCTURAL STUDY OF THE CA DINUCLEOTIDE STEP IN THE INTEGRASE PROCESSING SITE OF MOLONEY MURINE LEUKEMIA VIRUS organism=Moloney murine leukemia virus DNA sequence DT(B1) DT(B2) DT(B3) DC(B4) DA(B5) DT(B6) DT(B7) DG(B8) DC(B9) DA(B10) DA(B11) DT(B12) DG(B13) DA(B14) DA(B15) DA(B16) chainA ( 41) TYR64 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LEU99 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG116 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >2fvq_A:DNA/RNA_polymerases; title=A STRUCTURAL STUDY OF THE CA DINUCLEOTIDE STEP IN THE INTEGRASE PROCESSING SITE OF MOLONEY MURINE LEUKEMIA VIRUS organism=Moloney murine leukemia virus DNA sequence DC(B1) DT(B2) DT(B3) DT(B4) DC(B5) DA(B6) DT(B7) DT(B8) DA(B9) DA(B10) DT(B11) DG(B12) DA(B13) DA(B14) DA(B15) DG(B16) chainA ( 41) TYR64 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LEU99 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG116 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpvqdlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >2fvr_A:DNA/RNA_polymerases; title=A STRUCTURAL STUDY OF THE CA DINUCLEOTIDE STEP IN THE INTEGRASE PROCESSING SITE OF MOLONEY MURINE LEUKEMIA VIRUS organism=Moloney murine leukemia virus DNA sequence DT(B1) DC(B2) DT(B3) DT(B4) DT(B5) DC(B6) DA(B7) DT(B8) DA(B9) DT(B10) DG(B11) DA(B12) DA(B13) DA(B14) DG(B15) DA(B16) chainA ( 41) TYR64 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LEU99 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG116 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >2fvs_A:DNA/RNA_polymerases; title=A STRUCTURAL STUDY OF THE CA DINUCLEOTIDE STEP IN THE INTEGRASE PROCESSING SITE OF MOLONEY MURINE LEUKEMIA VIRUS organism=Moloney murine leukemia virus DNA sequence DC(B1) DA(B2) DC(B3) DA(B4) DA(B5) DT(B6) DG(B7) DA(B8) DT(B9) DC(B10) DA(B11) DT(B12) DT(B13) DG(B14) DT(B15) DG(B16) chainA ( 41) TYR64 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LEU99 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG116 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpvqdlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >2g1p_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF E. COLI DNA ADENINE METHYLTRANSFERASE (DAM) organism=Escherichia coli DNA sequence DC(G2):DG(F11) DT(G3):DA(F10) DA(G4):DT(F9) DG(G5):DC(F8) DA(G6):DT(F7) DT(G7):DA(F6) DC(G8):DG(F5) DT(G9):DA(F4) DA(G10):DT(F3) DG(G11):DC(F2) DA(G12):DT(F1) chainA ( 7) LYS9 0 0 0 0 0 0 7 4 0 0 0 (117) TYR119 0 0 0 0 100 0 0 0 0 0 0 (118) ASN120 0 0 0 0 0 0 32 0 0 0 0 (120) LEU122 0 0 0 0 12 0 0 0 0 0 0 (122) ARG124 0 0 19 13 6 0 0 0 0 0 0 (130) ASN132 0 0 4 0 0 0 0 0 0 0 0 (132) PRO134 0 0 0 6 12 0 0 0 0 0 0 (135) ARG137 0 0 0 0 0 25 0 0 0 0 0 (136) TYR138 0 0 0 0 0 0 13 0 0 0 0 (182) TYR184 0 0 0 0 0 6 0 0 0 0 0 (215) HIS228 0 0 0 0 0 20 0 0 0 0 0 (234) LYS260 0 0 0 0 0 3 0 0 0 0 0 (235) VAL261 0 0 0 0 0 5 0 0 0 0 0 prot.sequence knraflKwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlislynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygYNgLcRynlrgefNvPfgRYkkpyfpeaelyhfaekaqnaffycesyadsmaraddssvvycdppYaplnsftleqqahlaeiaeglverhipvlisnHdtmltrewyqraklhvvkKVdellalykp >2g1p_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF E. COLI DNA ADENINE METHYLTRANSFERASE (DAM) organism=Escherichia coli DNA sequence DT(F1):DA(G12) DC(F2):DG(G11) DT(F3):DA(G10) DA(F4):DT(G9) DG(F5):DC(G8) DA(F6):DT(G7) DT(F7):DA(G6) DC(F8):DG(G5) DT(F9):DA(G4) DA(F10):DT(G3) DG(F11):DC(G2) chainA ( 7) LYS9 0 0 0 4 14 0 0 0 0 0 0 (117) TYR119 0 0 0 0 0 0 50 0 0 0 0 (118) ASN120 0 0 0 0 64 0 0 0 0 0 0 (120) LEU122 0 0 0 0 0 0 6 0 0 0 0 (122) ARG124 0 0 0 0 0 0 3 13 19 0 0 (130) ASN132 0 0 0 0 0 0 0 0 4 0 0 (132) PRO134 0 0 0 0 0 0 6 6 0 0 0 (135) ARG137 0 0 0 0 0 25 0 0 0 0 0 (136) TYR138 0 0 0 0 26 0 0 0 0 0 0 (182) TYR184 0 0 0 0 0 6 0 0 0 0 0 (215) HIS228 0 0 0 0 0 20 0 0 0 0 0 (234) LYS260 0 0 0 0 0 3 0 0 0 0 0 (235) VAL261 0 0 0 0 0 5 0 0 0 0 0 chainB (117) TYR119 49 0 0 0 0 0 0 0 0 0 0 (120) LEU122 6 0 0 0 0 0 0 0 0 0 0 (122) ARG124 3 12 17 0 0 0 0 0 0 0 0 (130) ASN132 0 0 3 0 0 0 0 0 0 0 0 (132) PRO134 3 6 0 0 0 0 0 0 0 0 0 prot.sequence knraflKwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlislynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygYNgLcRynlrgefNvPfgRYkkpyfpeaelyhfaekaqnaffycesyadsmaraddssvvycdppYaplnsftleqqahlaeiaeglverhipvlisnHdtmltrewyqraklhvvkKVdellalykp/knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlislynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygYngLcRynlrgefNvPfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddssvvycdppyapltnsftleqqahlaeiaeglverhipvlisnhdtmltrewyqraklhvvkvkvdellalykp >2g8f_A:Ribonuclease_H-like; title=B. HALODURANS RNASE H CATALYTIC DOMAIN E188A MUTANT IN COMPLEX WITH MG2+ AND RNA/DNA HYBRID (NON-P NICK AT THE ACTIVE SITE) organism=Bacillus halodurans DNA sequence DA(C1) DT(C2) DG(C3) DT(C4) DC(C5) DG(C6) chainA ( 17) ASN77 0 4 0 0 0 0 ( 45) ASN105 0 0 7 0 0 0 ( 46) ASN106 0 0 11 0 0 0 ( 75) THR135 0 0 1 2 0 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgaikady >2g8h_A:Ribonuclease_H-like; title=B. HALODURANS RNASE H CATALYTIC DOMAIN D192N MUTANT IN COMPLEX WITH MG2+ AND RNA/DNA HYBRID (NON-P NICK AT THE ACTIVE SITE) organism=Bacillus halodurans DNA sequence DA(C1) DT(C2) DG(C3) DT(C4) DC(C5) DG(C6) chainA ( 17) ASN77 0 4 0 0 0 0 ( 45) ASN105 0 0 8 0 0 0 ( 46) ASN106 0 0 11 0 0 0 ( 75) THR135 0 0 1 1 0 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikanygrk >2g8i_A:Ribonuclease_H-like; title=B. HALODURANS RNASE H CATALYTIC DOMAIN D192N MUTANT IN COMPLEX WITH MN2+ AND RNA/DNA HYBRID (NON-P NICK AT THE ACTIVE SITE) organism=Bacillus halodurans DNA sequence DA(C1) DT(C2) DG(C3) DT(C4) DC(C5) DG(C6) chainA ( 16) ASN77 0 4 0 0 0 0 ( 44) ASN105 0 0 9 0 0 0 ( 45) ASN106 0 0 11 0 0 0 ( 74) THR135 0 0 1 1 0 0 prot.sequence eiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikanygr >2g8k_A:Ribonuclease_H-like; title=B. HALODURANS RNASE H CATALYTIC DOMAIN D192N MUTANT IN COMPLEX WITH CA2+ AND RNA/DNA HYBRID (NON-P NICK AT THE ACTIVE SITE) organism=Bacillus halodurans DNA sequence DA(C1) DT(C2) DG(C3) DT(C4) DC(C5) DG(C6) chainA ( 17) ASN77 0 4 0 0 0 0 ( 45) ASN105 0 0 8 0 0 0 ( 46) ASN106 0 0 11 0 0 0 ( 75) THR135 0 0 1 1 0 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikanygrk >2g8u_A:Ribonuclease_H-like; title=B. HALODURANS RNASE H CATALYTIC DOMAIN D132N MUTANT IN COMPLEX WITH MG2+ AND RNA/DNA HYBRID (NON-P NICK AT THE ACTIVE SITE) organism=Bacillus halodurans DNA sequence DA(C1) DT(C2) DG(C3) DT(C4) DC(C5) DG(C6) chainA ( 16) ASN77 0 5 1 0 0 0 ( 44) ASN105 0 0 7 0 0 0 ( 45) ASN106 0 0 10 1 0 0 ( 74) THR135 0 0 1 2 0 0 prot.sequence eiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsqTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikady >2g8v_A:Ribonuclease_H-like; title=B. HALODURANS RNASE H CATALYTIC DOMAIN E188A MUTANT IN COMPLEX WITH MG2+ AND RNA/DNA HYBRID (REACTION PRODUCT) organism=Bacillus halodurans DNA sequence DA(C1) DT(C2) DG(C3) DT(C4) DC(C5) DG(C6) chainA ( 17) ASN77 0 4 0 0 0 0 ( 45) ASN105 0 0 7 0 0 0 ( 46) ASN106 0 0 11 0 0 0 ( 74) GLN134 0 0 0 0 1 0 ( 75) THR135 0 0 1 2 0 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgaikady >2g8w_A:Ribonuclease_H-like; title=B. HALODURANS RNASE H CATALYTIC DOMAIN E188A MUTANT IN COMPLEX WITH CA2+ AND RNA/DNA HYBRID organism=Bacillus halodurans DNA sequence DA(C1) DT(C2) DG(C3) DT(C4) DC(C5) DG(C6) chainA ( 18) ASN77 4 0 0 0 0 0 ( 46) ASN105 0 5 0 0 0 0 ( 47) ASN106 0 5 0 0 0 0 ( 75) GLN134 0 0 1 1 0 0 ( 76) THR135 0 0 2 0 0 0 prot.sequence keeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgaikady >2gat_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=SOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF CHICKEN GATA-1 BOUND TO DNA, NMR, REGULARIZED MEAN STRUCTURE organism=GALLUS GALLUS DNA sequence DA(C117):DT(B116) DA(C118):DT(B115) DT(C119):DA(B114) DG(C120):DC(B113) DT(C121):DA(B112) DT(C122):DA(B111) DT(C123):DA(B110) DA(C124):DT(B109) DT(C125):DA(B108) DC(C126):DG(B107) DT(C127):DA(B106) DG(C128):DC(B105) DC(C129):DG(B104) DA(C130):DT(B103) DA(C131):DT(B102) DC(C132):DG(B101) chainA ( 16) THR16 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 ( 17) LEU17 0 0 0 0 0 0 0 0 0 8 15 0 0 0 0 0 ( 19) ARG19 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 ( 29) ASN29 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 ( 33) LEU33 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 ( 37) LEU37 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 57) LYS57 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 prot.sequence kragtvcsncqtsttTLwRrspmgdpvcNacgLyykLhqvnrpltmrkdgiqtrnrKvsskgkkrr >2gb7_A:Restriction_endonuclease-like; title=METAL-DEPLETED ECL18KI IN COMPLEX WITH UNCLEAVED, MODIFIED DNA organism=ENTEROBACTER CLOACAE DNA sequence DC(E-4):DG(F4) DG(E-3):DC(F3) DC(E-2):DG(F2) DC(E-1):DG(F1) DG(E1):DC(F-1) DG(E2):DC(F-2) DG(E3):DC(F-3) DC(E4):DG(F-4) chainA (112) GLN114 0 0 27 11 0 0 0 0 (115) ARG117 0 0 2 7 4 0 0 0 (116) SER118 0 7 3 0 0 0 0 0 (175) THR184 0 0 0 0 2 0 0 0 (177) ARG186 0 0 0 0 24 18 3 0 (178) GLU187 0 0 0 0 8 8 3 0 (179) ARG188 0 0 0 15 17 0 0 0 prot.sequence rlspgefktliskerkshfitpfalvyktfcdlgydqknsdyflnnpseyiiamrkncwkefepfekefttrmlsylideerikdmspydairdftmeypthiydlalsntQsrRSragkefesilellmmgagipvdvqgainqigklvdlvmpgvvqytsnkrntmlisaktTlRERwqevpeevnrtgiremylatlddsfseetinilyeanvvvvttvenknfkyknnnrvltfedmlqsamelsrkwnnvsytdsekeeiqqsilkqiekysdfpyvvnyyrnrlsa >2gb7_AB:Restriction_endonuclease-like; title=METAL-DEPLETED ECL18KI IN COMPLEX WITH UNCLEAVED, MODIFIED DNA organism=ENTEROBACTER CLOACAE DNA sequence DG(F-4):DC(E4) DC(F-3):DG(E3) DC(F-2):DG(E2) DC(F-1):DG(E1) DG(F1):DC(E-1) DG(F2):DC(E-2) DC(F3):DG(E-3) DG(F4):DC(E-4) chainA (112) GLN114 0 0 0 0 11 27 0 0 (115) ARG117 0 0 0 4 7 2 0 0 (116) SER118 0 0 0 0 0 3 7 0 (175) THR184 0 0 0 2 0 0 0 0 (177) ARG186 0 3 18 24 0 0 0 0 (178) GLU187 0 3 8 8 0 0 0 0 (179) ARG188 0 0 0 17 15 0 0 0 chainB (112) GLN114 0 0 25 11 0 0 0 0 (115) ARG117 0 0 2 7 6 0 0 0 (116) SER118 2 7 3 0 0 0 0 0 (174) THR184 0 0 0 0 2 0 0 0 (176) ARG186 0 0 0 0 18 16 2 0 (177) GLU187 0 0 0 0 6 9 3 0 (178) ARG188 0 0 0 13 16 0 0 0 prot.sequence rlspgefktliskerkshfitpfalvyktfcdlgydqknsdyflnnpseyiiamrkncwkefepfekefttrmlsylideerikdmspydairdftmeypthiydlalsntQsrRSragkefesilellmmgagipvdvqgainqigklvdlvmpgvvqytsnkrntmlisaktTlRERwqevpeevnrtgiremylatlddsfseetinilyeanvvvvttvenknfkyknnnrvltfedmlqsamelsrkwnnvsytdsekeeiqqsilkqiekysdfpyvvnyyrnrlsa/rlspgefktliskerkshfitpfalvyktfcdlgydqknsdyflnnpseyiiamrkncwkefepfekefttrmlsylideerikdmspydairdftmeypthiydlalsntQsrRSragkefesilellmmgagipvdvqgaiqigklvdlvmpgvvqytsnkrntmlisaktTlRERwqevpeevnrtgiremylatlddsfseetinilyeanvvvvttvenknfkyknnnrvltfedmlqsamelsrkwnnvsytdsekeeiqqsilkqiekysdfpyvvnyyrnrlsalfd >2gb7_CD:Restriction_endonuclease-like; title=METAL-DEPLETED ECL18KI IN COMPLEX WITH UNCLEAVED, MODIFIED DNA organism=ENTEROBACTER CLOACAE DNA sequence DC(G-4):DG(H4) DG(G-3):DC(H3) DC(G-2):DG(H2) DC(G-1):DG(H1) DG(G1):DC(H-1) DG(G2):DC(H-2) DG(G3):DC(H-3) DC(G4):DG(H-4) chainC (111) GLN114 0 0 25 11 0 0 0 0 (114) ARG117 0 0 1 7 6 0 0 0 (115) SER118 2 4 3 0 0 0 0 0 (173) THR184 0 0 0 0 2 0 0 0 (175) ARG186 0 0 0 0 21 18 2 0 (176) GLU187 0 0 0 0 8 10 3 0 (177) ARG188 0 0 0 13 18 0 0 0 chainD (111) GLN114 0 0 0 0 11 23 0 0 (114) ARG117 0 0 0 5 7 0 0 0 (115) SER118 0 0 0 0 0 3 8 2 (172) THR184 0 0 0 2 0 0 0 0 (174) ARG186 0 2 15 19 0 0 0 0 (175) GLU187 0 2 10 6 0 0 0 0 (176) ARG188 0 0 0 17 13 0 0 0 prot.sequence lspgefktliskerkshfitpfalvyktfcdlgydqknsdyflnnpseyiiamrkncwkefepfekefttrmlsylideerikdmspydairdftmeypthiydlalsntQsrRSragkefesilellmmgagipvdvqgaiqigklvdlvmpgvvqytsnkrntmlisaktTlRERwqevpeevnrtgiremylatlddsfseetinilyeanvvvvttvenknfkyknnnrvltfedmlqsamelsrkwnnvsytdsekeeiqqsilkqiekysdfpyvvnyyrnrlsalf/lspgefktliskerkshfitpfalvyktfcdlgydqknsdyflnnpseyiiamrkncwkefepfekefttrmlsylideerikdmspydairdftmeypthiydlalsntQsrRSragkefesilellmmgagipvdvqgaiigklvdlvmpgvvqytsnkrntmlisaktTlRERwqevpeevnrtgiremylatlddsfseetinilyeanvvvvttvenknfkyknnnrvltfedmlqsamelsrkwnnvsytdsekeeiqqsilkqiekysdfpyvvnyyrnrlsalf >2ge5_A:Restriction_endonuclease-like; title=ECORV RESTRICTION ENDONUCLEASE C-TERMINAL DELETION MUTANT/GATATC/CA2+ organism=Escherichia coli DNA sequence DA(D2):DT(C11) DA(D3):DT(C10) DG(D4):DC(C9) DA(D5):DT(C8) DT(D6):DA(C7) DA(D7):DT(C6) DT(D8):DA(C5) DC(D9):DG(C4) DT(D10):DA(C3) DT(D11):DA(C2) chainA ( 69) ASN70 0 0 0 0 0 4 5 4 0 0 (105) THR106 0 0 0 6 0 0 0 0 0 0 (182) SER183 0 0 4 7 0 0 0 0 0 0 (184) ASN185 0 0 16 12 0 0 0 0 0 0 (185) THR186 0 0 0 9 4 4 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnye >2ge5_AB:Restriction_endonuclease-like; title=ECORV RESTRICTION ENDONUCLEASE C-TERMINAL DELETION MUTANT/GATATC/CA2+ organism=Escherichia coli DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) chainA ( 69) ASN70 0 0 4 5 4 0 0 0 0 0 (105) THR106 0 0 0 0 0 0 6 0 0 0 (182) SER183 0 0 0 0 0 0 7 4 0 0 (184) ASN185 0 0 0 0 0 0 12 16 0 0 (185) THR186 0 0 0 0 4 4 9 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 chainB ( 69) ASN70 0 0 0 0 0 4 9 4 0 0 (105) THR106 0 0 0 9 0 0 0 0 0 0 (182) SER183 0 0 5 8 0 0 0 0 0 0 (184) ASN185 0 0 18 13 0 0 0 0 0 0 (185) THR186 0 0 0 8 5 6 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnye/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnye >2geq_AB:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF A P53 CORE DIMER BOUND TO DNA organism=Mus musculus DNA sequence DT(C4):DA(D15) DG(C5):DC(D14) DA(C6):DT(D13) DG(C7):DC(D12) DC(C8):DG(D11) DA(C9):DT(D10) DT(C10):DA(D9) DG(C11):DC(D8) DC(C12):DG(D7) DT(C13):DA(D6) DC(C14):DG(D5) DA(C15):DT(D4) DC(C16):DG(D3) chainA (172) ALA273 0 0 0 0 0 0 0 1 0 0 0 0 0 (173) CYS274 0 0 0 0 0 0 0 0 1 0 0 0 0 (176) ARG277 0 0 0 0 0 0 13 11 2 0 0 0 0 chainB (172) ALA273 0 0 0 0 1 0 0 0 0 0 0 0 0 (173) CYS274 0 0 0 1 0 0 0 0 0 0 0 0 0 (176) ARG277 0 0 0 0 13 10 0 0 0 0 0 0 0 prot.sequence qktyqgnygfhlgflqsvmctyspplnklfcqlaktcpvqlwvsatppagsrvramaiykksqhmtevvrrcphhercsdgdglappqhlirvegnlypeyledrqtfrhsvvvpyeppeagseyttihykymcnsscmggmnrrpiltiitledssgnllgrdsfevrvcACpgRdrrteeenfrkk/qktyqgnygfhlgflqsvmctyspplnklfcqlaktcpvqlwvsatppagsrvramaiykksqhmtevvrrcphhercsdgdglappqhlirvegnlypeyledrqtfrhsvvvpyeppeagseyttihykymcnsscmggmnrrpiltiitledssgnllgrdsfevrvcACpgRdrrteeenfrkke >2geq_B:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF A P53 CORE DIMER BOUND TO DNA organism=Mus musculus DNA sequence DT(C4):DA(D15) DG(C5):DC(D14) DA(C6):DT(D13) DG(C7):DC(D12) DC(C8):DG(D11) DA(C9):DT(D10) DT(C10):DA(D9) DG(C11):DC(D8) DC(C12):DG(D7) DT(C13):DA(D6) DC(C14):DG(D5) DA(C15):DT(D4) DC(C16):DG(D3) chainB (172) ALA273 0 0 0 0 1 0 0 0 0 0 0 0 0 (173) CYS274 0 0 0 1 0 0 0 0 0 0 0 0 0 (176) ARG277 0 0 0 0 13 10 0 0 0 0 0 0 0 prot.sequence qktyqgnygfhlgflqsvmctyspplnklfcqlaktcpvqlwvsatppagsrvramaiykksqhmtevvrrcphhercsdgdglappqhlirvegnlypeyledrqtfrhsvvvpyeppeagseyttihykymcnsscmggmnrrpiltiitledssgnllgrdsfevrvcACpgRdrrteeenfrkke >2gie_ABCD:Restriction_endonuclease-like; title=HINCII BOUND TO COGNATE DNA GTTAAC organism=Haemophilus influenzae DNA sequence DC(H3):DG(G12) DG(H4):DC(G11) DG(H5):DC(G10) DT(H6):DA(G9) DT(H7):DA(G8) DA(H8):DT(G7) DA(H9):DT(G6) DC(H10):DG(G5) DC(H11):DG(G4) DG(H12):DC(G3) DG(E1):DC(G2) DC(E2):DG(G1) DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DT(E6):DA(F9) DT(E7):DA(F8) DA(E8):DT(F7) DA(E9):DT(F6) DC(E10):DG(F5) DC(E11):DG(F4) DG(E12):DC(F3) chainA ( 30) HIS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (108) GLN109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 1 0 0 (109) ASN110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (137) GLN138 0 0 0 0 0 0 0 0 0 0 0 0 0 45 26 0 0 0 0 0 0 0 (139) PRO140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (140) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 7 1 0 0 0 0 (198) TYR199 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (200) ASN201 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 0 0 0 0 (202) ALA203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (203) ALA204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 (204) ALA205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 (206) GLN207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 chainB ( 30) HIS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 (108) GLN109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 5 0 0 0 0 0 (135) SER136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (137) GLN138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 39 0 (139) PRO140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (140) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 18 0 0 0 (198) TYR199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (200) ASN201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 (202) ALA203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (203) ALA204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 (204) ALA205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 (206) GLN207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 chainC ( 30) HIS31 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLN109 0 0 6 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER136 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) GLN138 0 0 0 0 0 0 0 27 38 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) PRO140 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) ASN141 0 0 0 0 1 9 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) TYR199 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASN201 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ALA203 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ALA204 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ALA205 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) GLN207 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN209 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 30) HIS31 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLN109 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ASN110 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) ALA137 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) GLN138 0 36 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) PRO140 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) ASN141 0 0 0 14 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) TYR199 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASN201 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ALA204 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ALA205 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) GLN207 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN209 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrnisksaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQndtadillvkdqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi/sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQndtadillvkdqfyelldvktrniskSaQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrnisksAQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwaAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >2gie_D:Restriction_endonuclease-like; title=HINCII BOUND TO COGNATE DNA GTTAAC organism=Haemophilus influenzae DNA sequence DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DT(F7):DA(E8) DA(F8):DT(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(G1):DC(E2) DC(G2):DG(E1) DC(G3):DG(H12) DG(G4):DC(H11) DG(G5):DC(H10) DT(G6):DA(H9) DT(G7):DA(H8) DA(G8):DT(H7) DA(G9):DT(H6) DC(G10):DG(H5) DC(G11):DG(H4) DG(G12):DC(H3) chainD ( 30) HIS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 (108) GLN109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 (109) ASN110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (136) ALA137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (137) GLN138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 36 0 (139) PRO140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 (140) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 14 0 0 0 (198) TYR199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (200) ASN201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 (203) ALA204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 (204) ALA205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 (206) GLN207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 prot.sequence sfikpiyqdinsiligqkvkrpksgtlsgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrnisksAQaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwaAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >2gig_A:Restriction_endonuclease-like; title=ALTERATION OF SEQUENCE SPECIFICITY OF THE TYPE II RESTRICTION ENDONUCLEASE HINCII THROUGH AN INDIRECT READOUT MECHANISM organism=Haemophilus influenzae DNA sequence DG(F1):DC(E14) DC(F2):DG(E13) DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DC(F7):DG(E8) DG(F8):DC(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(F13):DC(E2) DC(F14):DG(E1) chainA (101) GLN109 0 0 0 0 3 6 7 0 0 0 0 0 0 0 (102) ASN110 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (128) SER136 0 0 0 0 0 0 0 0 0 0 4 1 0 0 (130) PHE138 0 0 0 0 0 0 0 0 0 50 53 0 0 0 (132) PRO140 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (133) ASN141 0 0 0 0 0 0 3 7 15 1 0 0 0 0 (191) TYR199 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (193) ASN201 0 0 0 0 0 0 0 0 0 9 2 0 0 0 (195) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (196) ALA204 0 0 0 0 0 0 0 0 4 4 0 0 0 0 (197) ALA205 0 0 0 0 0 4 3 0 0 0 0 0 0 0 (199) GLN207 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (201) GLN209 0 0 0 0 0 0 0 0 1 7 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrphaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >2gig_AB:Restriction_endonuclease-like; title=ALTERATION OF SEQUENCE SPECIFICITY OF THE TYPE II RESTRICTION ENDONUCLEASE HINCII THROUGH AN INDIRECT READOUT MECHANISM organism=Haemophilus influenzae DNA sequence DG(F1):DC(E14) DC(F2):DG(E13) DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DC(F7):DG(E8) DG(F8):DC(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(F13):DC(E2) DC(F14):DG(E1) chainA (101) GLN109 0 0 0 0 3 6 7 0 0 0 0 0 0 0 (102) ASN110 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (128) SER136 0 0 0 0 0 0 0 0 0 0 4 1 0 0 (130) PHE138 0 0 0 0 0 0 0 0 0 50 53 0 0 0 (132) PRO140 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (133) ASN141 0 0 0 0 0 0 3 7 15 1 0 0 0 0 (191) TYR199 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (193) ASN201 0 0 0 0 0 0 0 0 0 9 2 0 0 0 (195) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (196) ALA204 0 0 0 0 0 0 0 0 4 4 0 0 0 0 (197) ALA205 0 0 0 0 0 4 3 0 0 0 0 0 0 0 (199) GLN207 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (201) GLN209 0 0 0 0 0 0 0 0 1 7 0 0 0 0 chainB (119) SER136 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (121) PHE138 0 0 0 50 45 0 0 0 0 0 0 0 0 0 (123) PRO140 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (124) ASN141 0 0 0 0 0 13 8 4 0 0 0 0 0 0 (182) TYR199 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (184) ASN201 0 0 0 2 9 0 0 0 0 0 0 0 0 0 (186) ALA203 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (187) ALA204 0 0 0 0 3 4 0 0 0 0 0 0 0 0 (188) ALA205 0 0 0 0 0 0 0 3 4 0 0 0 0 0 (190) GLN207 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (192) GLN209 0 0 0 0 6 1 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrphaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi/sfikpiyqdinsiligqkvfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekqndtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >2gih_A:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO COGNATE DNA GTCGAC AND CA2+ organism=Haemophilus influenzae DNA sequence DG(F1):DC(E14) DC(F2):DG(E13) DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DC(F7):DG(E8) DG(F8):DC(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(F13):DC(E2) DC(F14):DG(E1) chainA (108) GLN109 0 0 0 0 1 6 6 0 0 0 0 0 0 0 (109) ASN110 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (136) ALA137 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (137) PHE138 0 0 0 0 0 0 0 0 0 51 45 0 0 0 (139) PRO140 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (140) ASN141 0 0 0 0 0 0 2 8 13 0 0 0 0 0 (198) TYR199 0 0 0 0 0 0 0 0 0 0 7 0 0 0 (200) ASN201 0 0 0 0 0 0 0 0 0 8 2 0 0 0 (202) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (203) ALA204 0 0 0 0 0 0 0 0 4 1 0 0 0 0 (204) ALA205 0 0 0 0 0 3 3 0 0 0 0 0 0 0 (206) GLN207 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 1 6 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrpksgtlsghaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrnisksAFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil >2gih_AB:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO COGNATE DNA GTCGAC AND CA2+ organism=Haemophilus influenzae DNA sequence DG(F1):DC(E14) DC(F2):DG(E13) DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DC(F7):DG(E8) DG(F8):DC(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(F13):DC(E2) DC(F14):DG(E1) chainA (108) GLN109 0 0 0 0 1 6 6 0 0 0 0 0 0 0 (109) ASN110 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (136) ALA137 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (137) PHE138 0 0 0 0 0 0 0 0 0 51 45 0 0 0 (139) PRO140 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (140) ASN141 0 0 0 0 0 0 2 8 13 0 0 0 0 0 (198) TYR199 0 0 0 0 0 0 0 0 0 0 7 0 0 0 (200) ASN201 0 0 0 0 0 0 0 0 0 8 2 0 0 0 (202) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (203) ALA204 0 0 0 0 0 0 0 0 4 1 0 0 0 0 (204) ALA205 0 0 0 0 0 3 3 0 0 0 0 0 0 0 (206) GLN207 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 1 6 0 0 0 0 chainB (102) GLN109 0 0 0 0 0 0 0 7 4 1 0 0 0 0 (103) ASN110 0 0 0 0 0 0 0 0 1 4 0 0 0 0 (129) SER136 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (131) PHE138 0 0 0 52 50 0 0 0 0 0 0 0 0 0 (133) PRO140 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (134) ASN141 0 0 0 0 0 14 8 3 0 0 0 0 0 0 (192) TYR199 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (194) ASN201 0 0 0 3 8 0 0 0 0 0 0 0 0 0 (196) ALA203 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (197) ALA204 0 0 0 0 2 3 0 0 0 0 0 0 0 0 (198) ALA205 0 0 0 0 0 0 0 3 4 0 0 0 0 0 (200) GLN207 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (202) GLN209 0 0 0 1 6 1 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrpksgtlsghaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrnisksAFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqkvkrsghaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil >2gii_AB:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO COGNATE DNA GTTAAC organism=Haemophilus influenzae DNA sequence DG(F1):DC(E14) DC(F2):DG(E13) DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DT(F7):DA(E8) DA(F8):DT(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(F13):DC(E2) DC(F14):DG(E1) chainA (120) SER136 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (122) PHE138 0 0 0 0 0 0 0 0 0 51 51 0 0 0 (124) PRO140 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (125) ASN141 0 0 0 0 0 0 1 8 11 1 0 0 0 0 (179) TYR199 0 0 0 0 0 0 0 0 0 0 6 0 0 0 (181) ASN201 0 0 0 0 0 0 0 0 0 9 2 0 0 0 (183) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (184) ALA204 0 0 0 0 0 0 0 0 4 3 0 0 0 0 (185) ALA205 0 0 0 0 0 3 1 0 0 0 0 0 0 0 (189) GLN209 0 0 0 0 0 0 0 0 1 6 0 0 0 0 chainB (114) SER136 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (116) PHE138 0 0 0 48 49 0 0 0 0 0 0 0 0 0 (118) PRO140 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (119) ASN141 0 0 0 0 0 12 9 1 0 0 0 0 0 0 (170) TYR199 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (172) ASN201 0 0 0 3 8 0 0 0 0 0 0 0 0 0 (174) ALA203 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (175) ALA204 0 0 0 0 3 4 0 0 0 0 0 0 0 0 (176) ALA205 0 0 0 0 0 0 0 1 3 0 0 0 0 0 (180) GLN209 0 0 0 0 6 1 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekqNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwellvcvstsfaelfksepselYiNwAAAmqiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiliepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwslfeekqndtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwecvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkky >2gii_B:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO COGNATE DNA GTTAAC organism=Haemophilus influenzae DNA sequence DG(F1):DC(E14) DC(F2):DG(E13) DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DT(F7):DA(E8) DA(F8):DT(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(F13):DC(E2) DC(F14):DG(E1) chainB (114) SER136 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (116) PHE138 0 0 0 48 49 0 0 0 0 0 0 0 0 0 (118) PRO140 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (119) ASN141 0 0 0 0 0 12 9 1 0 0 0 0 0 0 (170) TYR199 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (172) ASN201 0 0 0 3 8 0 0 0 0 0 0 0 0 0 (174) ALA203 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (175) ALA204 0 0 0 0 3 4 0 0 0 0 0 0 0 0 (176) ALA205 0 0 0 0 0 0 0 1 3 0 0 0 0 0 (180) GLN209 0 0 0 0 6 1 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiliepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwslfeekqndtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwecvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkky >2gij_A:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO COGNATE DNA GTTAAC AND CA2+ organism=Haemophilus influenzae DNA sequence DG(F1):DC(E14) DC(F2):DG(E13) DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DT(F7):DA(E8) DA(F8):DT(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(F13):DC(E2) DC(F14):DG(E1) chainA ( 96) GLN109 0 0 0 0 6 9 5 0 0 0 0 0 0 0 ( 97) ASN110 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (123) SER136 0 0 0 0 0 0 0 0 0 0 6 3 0 0 (125) PHE138 0 0 0 0 0 0 0 0 0 52 54 0 0 0 (127) PRO140 0 0 0 0 0 0 0 0 3 1 0 0 0 0 (128) ASN141 0 0 0 0 0 0 1 6 15 1 0 0 0 0 (186) TYR199 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (188) ASN201 0 0 0 0 0 0 0 0 0 8 2 0 0 0 (190) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (191) ALA204 0 0 0 0 0 0 0 0 3 4 0 0 0 0 (192) ALA205 0 0 0 0 0 3 1 0 0 0 0 0 0 0 (194) GLN207 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (196) GLN209 0 0 0 0 0 0 0 0 1 8 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil >2gij_AB:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO COGNATE DNA GTTAAC AND CA2+ organism=Haemophilus influenzae DNA sequence DG(F1):DC(E14) DC(F2):DG(E13) DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DT(F7):DA(E8) DA(F8):DT(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(F13):DC(E2) DC(F14):DG(E1) chainA ( 96) GLN109 0 0 0 0 6 9 5 0 0 0 0 0 0 0 ( 97) ASN110 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (123) SER136 0 0 0 0 0 0 0 0 0 0 6 3 0 0 (125) PHE138 0 0 0 0 0 0 0 0 0 52 54 0 0 0 (127) PRO140 0 0 0 0 0 0 0 0 3 1 0 0 0 0 (128) ASN141 0 0 0 0 0 0 1 6 15 1 0 0 0 0 (186) TYR199 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (188) ASN201 0 0 0 0 0 0 0 0 0 8 2 0 0 0 (190) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (191) ALA204 0 0 0 0 0 0 0 0 3 4 0 0 0 0 (192) ALA205 0 0 0 0 0 3 1 0 0 0 0 0 0 0 (194) GLN207 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (196) GLN209 0 0 0 0 0 0 0 0 1 8 0 0 0 0 chainB ( 91) ASN110 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (117) SER136 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (119) PHE138 0 0 0 50 48 0 0 0 0 0 0 0 0 0 (121) PRO140 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (122) ASN141 0 0 0 0 1 13 7 1 0 0 0 0 0 0 (178) TYR199 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (180) ASN201 0 0 0 2 9 0 0 0 0 0 0 0 0 0 (182) ALA203 0 0 0 0 2 1 0 0 0 0 0 0 0 0 (183) ALA204 0 0 0 0 4 4 0 0 0 0 0 0 0 0 (184) ALA205 0 0 0 0 0 0 0 1 3 0 0 0 0 0 (186) GLN207 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (188) GLN209 0 0 0 0 6 1 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekqNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwegedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >2gli_A:C2H2_and_C2HC_zinc_fingers; title=FIVE-FINGER GLI/DNA COMPLEX organism=Homo sapiens DNA sequence DC(D2):DG(C21) DG(D3):DC(C20) DT(D4):DA(C19) DG(D5):DC(C18) DG(D6):DC(C17) DA(D7):DT(C16) DC(D8):DG(C15) DC(D9):DG(C14) DA(D10):DT(C13) DC(D11):DG(C12) DC(D12):DG(C11) DC(D13):DG(C10) DA(D14):DT(C9) DA(D15):DT(C8) DG(D16):DC(C7) DA(D17):DT(C6) DC(D18):DG(C5) DG(D19):DC(C4) DA(D20):DT(C3) DA(D21):DT(C2) chainA ( 51) ALA153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 53) TYR155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 2 0 ( 81) ARG183 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 84) ASN186 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (112) ALA214 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (113) SER215 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 (114) ASP216 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 (117) LYS219 0 0 0 0 0 0 0 0 0 2 7 5 0 0 0 0 0 0 0 0 (142) ASP244 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 (143) PRO245 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (144) SER246 0 0 0 0 0 0 4 11 10 0 0 0 0 0 0 0 0 0 0 0 (145) SER247 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) ARG249 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 (148) LYS250 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence etdcrwdgcsqefdsqeqlvhhinsehihgerkefvchwggcsrelrpfkAqYmlvvhmrrhtgekphkctfegcrksysRleNlkthlrshtgekpymcehegcskafsnASDraKhqnRthsnekpyvcklpgctkrytDPSSlRKhvktvhg >2glo_A:Homeodomain-like; title=SOLUTION STRUCTURE OF THE BRINKER DNA BINDING DOMAIN IN COMPLEX WITH THE OMB ENHANCER organism=DROSOPHILA MELANOGASTER DNA sequence DT(B1):DA(C24) DG(B2):DC(C23) DA(B3):DT(C22) DG(B4):DC(C21) DG(B5):DC(C20) DC(B6):DG(C19) DG(B7):DC(C18) DT(B8):DA(C17) DC(B9):DG(C16) DA(B10):DT(C15) DA(B11):DT(C14) DC(B12):DG(C13) chainA ( 3) ARG45 0 0 0 0 0 0 0 0 19 12 8 0 ( 38) HIS80 0 0 0 0 0 0 9 0 0 0 0 0 ( 39) ARG81 0 0 0 6 2 0 0 0 0 0 0 0 ( 40) ARG82 0 0 0 0 1 22 12 0 0 0 0 0 ( 41) GLN83 0 0 0 0 0 0 1 9 6 0 0 0 ( 43) GLN85 0 0 0 0 6 4 0 0 0 0 0 0 ( 44) LYS86 0 0 0 0 0 0 8 5 1 0 0 0 prot.sequence gsRriftphfklqvlesyrndndckgnqratarkyniHRRQiQKwlqcesnlrssvann >2gm4_A:Resolvase-like;Homeodomain-like; title=AN ACTIVATED, TETRAMERIC GAMMA-DELTA RESOLVASE: HIN CHIMAERA BOUND TO CLEAVED DNA organism=ESCHERICHIA COLI DNA sequence DA(X3):DT(Y34) DG(X4):DC(Y33) DT(X5):DA(Y32) DG(X6):DC(Y31) DT(X7):DA(Y30) DC(X8):DG(Y29) DC(X9):DG(Y28) DG(X10):DC(Y27) DA(X11):DT(Y26) DT(X12):DA(Y25) DA(X13):DT(Y24) DA(X14):DT(Y23) DT(X15):DA(Z22) DT(X16):DA(Z21) DT(X17):DA(Z20) chainA ( 11) THR11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (122) THR126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (126) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 (138) ARG142 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 (167) ALA171 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (168) ARG172 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 (169) SER173 0 0 0 0 0 7 6 5 0 0 0 0 0 0 0 (170) THR174 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (172) TYR176 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 prot.sequence malfgyarvsTsqqsldiqvralkdagvkanriftdkasdrkgldllrmkvkegdvilvkkldrlgrdtadmiqlikefdaqgvsirfiddsidtssamgrmvvtilsavaqaerqrilqrTnegRqeamakgvvfgRkrkidrdavlnmwqqglgashisktmniARSTvYkvinesn >2gws_I:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE LAMBDA WITH A G/G MISMATCH IN THE PRIMER TERMINUS organism=? DNA sequence DG(J6):DG(K6) DC(J7):DG(K5) DG(J8):DC(K4) DC(J9):DG(K3) DA(J10):DT(K2) DC(J11):DG(K1) chainI (216) GLU465 0 1 1 0 0 0 (256) TYR505 3 0 0 0 0 0 prot.sequence tnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqEengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >2gxa_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF PAPILLOMAVIRUS E1 HEXAMERIC HELICASE WITH SSDNA AND MGADP organism=Bovine papillomavirus type 1 DNA sequence DT(M1) DT(M2) DT(M3) DT(M4) DT(M5) DT(M6) chainA chainB chainC (200) HIS507 2 0 0 0 0 0 chainD (200) HIS507 0 2 0 0 0 0 chainE (204) HIS507 0 1 7 0 0 0 chainF (200) HIS507 0 0 6 4 0 0 prot.sequence tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkhkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl/tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkhkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl/tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl/tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl/gslqtekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl/tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl >2gxa_GHIJKL:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF PAPILLOMAVIRUS E1 HEXAMERIC HELICASE WITH SSDNA AND MGADP organism=Bovine papillomavirus type 1 DNA sequence DT(N1) DT(N2) DT(N3) DT(N4) DT(N5) DT(N6) DT(N7) chainG chainH (160) HIS463 0 0 1 0 0 0 0 (161) PHE464 0 0 1 0 0 0 0 (204) HIS507 3 0 0 0 0 0 0 chainI (200) HIS507 0 3 0 0 0 0 0 chainJ (200) HIS507 0 4 6 0 0 0 0 chainK (203) HIS507 0 0 2 5 0 0 0 chainL (200) HIS507 0 0 0 7 4 0 0 prot.sequence tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkhkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl/gslqtekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhksHFwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl/tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl/tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl/slqtekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl/tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl >2gxa_L:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF PAPILLOMAVIRUS E1 HEXAMERIC HELICASE WITH SSDNA AND MGADP organism=Bovine papillomavirus type 1 DNA sequence DT(N1) DT(N2) DT(N3) DT(N4) DT(N5) DT(N6) DT(N7) chainL (200) HIS507 0 0 0 7 4 0 0 prot.sequence tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl >2gzk_A:HMG-box; title=STRUCTURE OF A COMPLEX OF TANDEM HMG BOXES AND DNA organism=HOMO SAPIENS, RATTUS RATTUS DNA sequence DG(B201):DC(C232) DG(B202):DC(C231) DG(B203):DC(C230) DA(B204):DT(C229) DT(B205):DA(C228) DC(B206):DG(C227) DT(B207):DA(C226) DA(B208):DT(C225) DA(B209):DT(C224) DA(B210):DT(C223) DC(B211):DG(C222) DA(B212):DT(C221) DA(B213):DT(C220) DT(B214):DA(C219) DG(B215):DC(C218) DC(B216):DG(C217) chainA ( 7) ARG7 0 0 0 0 0 0 0 0 3 8 9 6 0 0 0 0 ( 10) ASN10 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 ( 12) PHE12 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 ( 13) ILE13 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 ( 20) ARG20 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 1 ( 32) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 15 ( 36) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 ( 74) TYR74 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 76) LYS76 0 0 0 0 0 0 0 3 8 4 0 0 0 0 0 0 ( 78) GLU78 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 ( 81) LYS81 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 91) ARG91 0 0 0 4 9 8 4 0 0 0 0 0 0 0 0 0 ( 96) PHE96 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) PHE97 0 0 40 25 0 0 0 0 0 0 0 0 0 0 0 0 (100) CYS100 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ILE116 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) ALA120 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vqdrvkRpmNaFIvwsrdqRrkmalenprmrNseiSkqlgyqwkmlteaekwpffqeaqklqamhrekypnykYrKgEtkKkfkdpnapkRppsaFFlfCseyrpkikgehpglsIgdvAkklgemwnntaaddkqpyekkaaklkekyekdiaayrak >2h1k_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE PDX1 HOMEODOMAIN IN COMPLEX WITH DNA organism=Mesocricetus auratus DNA sequence DC(F215):DG(E114) DT(F216):DA(E113) DC(F217):DG(E112) DT(F218):DA(E111) DA(F219):DT(E110) DA(F220):DT(E109) DT(F221):DA(E108) DG(F222):DC(E107) DA(F223):DT(E106) DG(F224):DC(E105) DT(F225):DA(E104) DT(F226):DA(E103) DT(F227):DA(E102) DC(F228):DG(E101) chainB ( 2) LYS2 0 0 0 0 3 3 0 0 0 0 0 0 0 0 ( 5) ARG5 0 0 14 6 6 0 0 0 0 0 0 0 0 0 ( 47) ILE47 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 50) GLN50 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 51) ASN51 0 0 0 0 8 12 0 0 0 0 0 0 0 0 ( 54) MET54 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence nKrtRtaytraqllelekeflfnkyisrprrvelavmlnlterhikIwfQNrrMkwkkee >2h1o_EFGH:PIN_domain-like;Ribbon-helix-helix; title=STRUCTURE OF FITAB BOUND TO IR36 DNA FRAGMENT organism=NEISSERIA GONORRHOEAE DNA sequence DC(V37):DG(U36) DA(V38):DT(U35) DA(V39):5IU(U34) DA(V40):DT(U33) DT(V41):DA(U32) DG(V42):DC(U31) DC(V43):DG(U30) DT(V44):DA(U29) DA(V45):DT(U28) DT(V46):DA(U27) DC(V47):DG(U26) DA(V48):DT(U25) DA(V49):DT(U24) DA(V50):DT(U23) DA(V51):DT(U22) 5IU(V52):DA(U21) DA(V53):DT(U20) DA(V54):DT(U19) DA(V55):DT(U18) DA(V56):DT(U17) DA(V57):DT(U16) DA(V58):DT(U15) DA(V59):DT(U14) DA(V60):DT(U13) DT(V61):DA(U12) DG(V62):DC(U11) DA(V63):DT(U10) DT(V64):DA(U9) DA(V65):DT(U8) DG(V66):DC(U7) DC(V67):DG(U6) DA(V68):DT(U5) DA(V69):DT(U4) DT(V70):DA(U3) DC(V71):DG(U2) DT(V72):DA(U1) chainE ( 2) SER3 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) VAL5 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG7 0 0 0 0 0 0 0 0 0 5 15 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 2) SER3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 4) VAL5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 ( 6) ARG7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 13 0 0 0 0 chainG ( 2) SER3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 4) VAL5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 ( 6) ARG7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 4 0 0 0 0 0 0 0 0 0 chainH ( 2) SER3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) VAL5 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG7 0 0 0 0 14 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLU29 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aSvViRnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeiggveledvrg/aSvViRnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeiggvele/aSvViRnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeiggveledvr/aSvViRnlseathnaikfraraagrstEaeirlildniakaqqtvrlgsmlasigqeiggvel >2h27_A:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF ESCHERICHIA COLI SIGMAE REGION 4 BOUND TO ITS-35 ELEMENT DNA organism=Escherichia coli K12 DNA sequence DC(C15):DG(B12) DG(C16):DC(B11) DA(C17):DT(B10) DA(C18):DT(B9) DG(C19):DC(B8) DT(C20):DA(B7) DT(C21):DA(B6) DC(C22):DG(B5) DC(C23):DG(B4) DG(C24):DC(B3) DG(C25):DC(B2) chainA ( 37) TYR156 0 0 0 0 4 0 0 0 0 0 0 ( 50) THR169 0 0 0 0 0 0 0 4 0 0 0 ( 52) ARG171 0 0 0 9 19 8 1 0 0 0 0 ( 53) SER172 0 0 0 0 0 0 2 9 2 0 0 ( 56) PHE175 0 0 0 0 0 3 7 0 0 0 0 ( 57) ARG176 0 0 0 0 0 0 0 8 13 18 0 prot.sequence shmlseelrqivfrtieslpedlrmaitlreldglsYeeiaaimdcpvgTvRSriFRareaidnkvqplir >2h3a_AB: title=STRUCTURAL BASIS FOR NUCLEIC ACID AND TOXIN RECOGNITION OF THE BACTERIAL ANTITOXIN CCDA organism=ESCHERICHIA COLI DNA sequence DC(D187):DG(C185) DG(D188):DC(C184) DG(D189):DC(C183) DG(D190):DC(C182) DT(D191):DA(C181) DA(D192):DT(C180) DT(D193):DA(C179) DA(D194):DT(C178) DC(D195):DG(C177) DA(D196):DT(C176) DT(D197):DA(C175) DA(D198):DT(C174) chainA ( 4) ARG4 0 0 4 10 9 14 0 0 0 0 0 0 ( 6) THR6 0 0 0 0 0 0 0 7 0 0 0 0 ( 8) THR8 0 0 0 0 0 0 0 1 6 8 0 0 chainB ( 4) ARG104 0 0 0 0 7 16 14 11 0 0 0 0 ( 6) THR106 0 0 0 1 4 0 0 0 0 0 0 0 ( 8) THR108 0 0 2 1 0 0 0 0 0 0 0 0 ( 62) ASN162 0 0 0 0 0 0 0 0 1 0 0 0 ( 71) ASP171 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkqRiTvTvdsdsyqllkaydvnisglvsttmqnearrlraerwkvenqegmvevarfiemngsfadenkdw/mkqRiTvTvdsdsyqllkaydvnisglvsttmqnearrlraerwkvenqegmvevarfiemNgsfadenkDw >2h3a_B: title=STRUCTURAL BASIS FOR NUCLEIC ACID AND TOXIN RECOGNITION OF THE BACTERIAL ANTITOXIN CCDA organism=ESCHERICHIA COLI DNA sequence DT(C174):DA(D198) DA(C175):DT(D197) DT(C176):DA(D196) DG(C177):DC(D195) DT(C178):DA(D194) DA(C179):DT(D193) DT(C180):DA(D192) DA(C181):DT(D191) DC(C182):DG(D190) DC(C183):DG(D189) DC(C184):DG(D188) DG(C185):DC(D187) chainB ( 4) ARG104 0 0 0 0 11 14 16 7 0 0 0 0 ( 6) THR106 0 0 0 0 0 0 0 4 1 0 0 0 ( 8) THR108 0 0 0 0 0 0 0 0 1 2 0 0 ( 62) ASN162 0 0 0 1 0 0 0 0 0 0 0 0 ( 71) ASP171 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence mkqRiTvTvdsdsyqllkaydvnisglvsttmqnearrlraerwkvenqegmvevarfiemNgsfadenkDw >2h3c_A: title=STRUCTURAL BASIS FOR NUCLEIC ACID AND TOXIN RECOGNITION OF THE BACTERIAL ANTITOXIN CCDA organism=ESCHERICHIA COLI DNA sequence DT(C174):DA(D198) DA(C175):DT(D197) DT(C176):DA(D196) DG(C177):DC(D195) DT(C178):DA(D194) DA(C179):DT(D193) DT(C180):DA(D192) DA(C181):DT(D191) DC(C182):DG(D190) DC(C183):DG(D189) DC(C184):DG(D188) DG(C185):DC(D187) chainA ( 4) ARG4 0 0 0 0 0 0 16 13 8 0 0 0 ( 6) THR6 0 0 0 0 4 0 0 0 0 0 0 0 ( 8) THR8 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence mkqRiTvTvdsdsyqllkaydvnisglvsttmqnearrlraerwkvenqegmvevarfiemngsfadenkdw >2h3c_AB: title=STRUCTURAL BASIS FOR NUCLEIC ACID AND TOXIN RECOGNITION OF THE BACTERIAL ANTITOXIN CCDA organism=ESCHERICHIA COLI DNA sequence DT(C174):DA(D198) DA(C175):DT(D197) DT(C176):DA(D196) DG(C177):DC(D195) DT(C178):DA(D194) DA(C179):DT(D193) DT(C180):DA(D192) DA(C181):DT(D191) DC(C182):DG(D190) DC(C183):DG(D189) DC(C184):DG(D188) DG(C185):DC(D187) chainA ( 4) ARG4 0 0 0 0 0 0 16 13 8 0 0 0 ( 6) THR6 0 0 0 0 4 0 0 0 0 0 0 0 ( 8) THR8 0 0 3 0 0 0 0 0 0 0 0 0 chainB ( 4) ARG104 0 0 2 12 12 5 1 0 0 0 0 0 ( 6) THR106 0 0 0 0 0 0 1 8 0 0 0 0 prot.sequence mkqRiTvTvdsdsyqllkaydvnisglvsttmqnearrlraerwkvenqegmvevarfiemngsfadenkdw/mkqRiTvtvdsdsyqllkaydvnisglvsttmqnearrlraerwkvenqegmvevarfiemngsfadenkdw >2h7f_X:DNA_breaking-rejoining_enzymes;DNA_topoisomerase_I_domain; title=STRUCTURE OF VARIOLA TOPOISOMERASE COVALENTLY BOUND TO DNA organism=Variola virus DNA sequence DA(Z519):DT(Y511) DA(Z520):DT(Y510) DG(Z521):DC(Y509) DG(Z522):DC(Y508) DG(Z523):DC(Y507) DC(Z524):DG(Y506) DG(Z525):DC(Y505) DA(Z526):DT(Y504) DC(Z527):DG(Y503) DA(Z528):DT(Y502) chainX ( 67) ARG67 0 2 0 0 0 0 0 0 0 0 ( 69) GLN69 5 9 0 0 0 0 0 0 0 0 ( 70) TYR70 0 0 6 9 0 0 0 0 0 0 ( 72) TYR72 0 3 5 0 0 0 0 0 0 0 ( 80) ARG80 3 2 0 0 0 0 0 0 0 0 (133) LYS133 0 0 0 3 8 2 0 0 0 0 (136) TYR136 0 0 15 9 0 0 0 0 0 0 (167) LYS167 3 2 0 0 0 0 0 0 0 0 (206) ARG206 0 0 0 0 0 0 0 1 7 12 (209) TYR209 0 0 0 0 2 3 0 0 0 0 prot.sequence mralfykdgklftdnnflnpvsdnnpayevlqhvkipthltdvvvygqtweealtrlifvgsdskgRrQYfYgkmhvqnRnakrdrifvrvynvmkrinsfinknikksstdsnyqlavfmlmetmffirfgKmkYlkenetvglltlknkhieispdkivikfvgKdkvshefvvhksnrlykpllkltddsspeeflfnklseRkvYesikqfgirikdlrtygvnytflynfwtnvksisplpspkklialtikqtaevvghtpsiskramattilemvkdknfldvvskttfdeflsivvdhvksstdg >2h7g_X:DNA_breaking-rejoining_enzymes;DNA_topoisomerase_I_domain; title=STRUCTURE OF VARIOLA TOPOISOMERASE NON-COVALENTLY BOUND TO DNA organism=Variola virus DNA sequence DA(Z519):DT(Y511) DA(Z520):DT(Y510) DG(Z521):DC(Y509) DG(Z522):DC(Y508) DG(Z523):DC(Y507) DC(Z524):DG(Y506) DG(Z525):DC(Y505) DA(Z526):DT(Y504) DC(Z527):DG(Y503) DA(Z528):DT(Y502) chainX ( 67) ARG67 0 3 0 0 0 0 0 0 0 0 ( 69) GLN69 5 10 0 0 0 0 0 0 0 0 ( 70) TYR70 0 0 6 9 0 0 0 0 0 0 ( 72) TYR72 0 3 5 0 0 0 0 0 0 0 ( 80) ARG80 4 4 0 0 0 0 0 0 0 0 (133) LYS133 0 0 0 7 8 3 0 0 0 0 (135) LYS135 0 0 0 0 0 6 2 0 0 0 (136) TYR136 0 0 16 9 0 0 0 0 0 0 (167) LYS167 3 2 0 0 0 0 0 0 0 0 (205) GLU205 0 0 0 0 0 0 0 1 0 0 (206) ARG206 0 0 0 0 0 0 0 2 10 14 (209) TYR209 0 0 0 0 3 5 0 0 0 0 prot.sequence mralfykdgklftdnnflnpvsdnnpayevlqhvkipthltdvvvygqtweealtrlifvgsdskgRrQYfYgkmhvqnRnakrdrifvrvynvmkrinsfinknikksstdsnyqlavfmlmetmffirfgKmKYlkenetvglltlknkhieispdkivikfvgKDkvshefvvhksnrlykpllkltddsspeeflfnklsERkvYesikqfgirikdlrtygvnytflynfwtnvksisplpspkklialtikqtaevvghtpsiskraymattilemvkdknfldvvskttfdeflsivvdhvksst >2h7h_A:Leucine_zipper_domain;A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=CRYSTAL STRUCTURE OF THE JUN BZIP HOMODIMER COMPLEXED WITH AP-1 DNA organism=Avian sarcoma virus DNA sequence DC(Y201):DG(X219) DG(Y202):DC(X218) DT(Y203):DA(X217) DC(Y204):DG(X216) DG(Y205):DC(X215) DA(Y206):DT(X214) DT(Y207):DA(X213) DG(Y208):DC(X212) DA(Y209):DT(X211) DG(Y210):DC(X210) DT(Y211):DA(X209) DC(Y212):DG(X208) DA(Y213):DT(X207) DT(Y214):DA(X206) DC(Y215):DG(X205) DG(Y216):DC(X204) DA(Y217):DT(X203) DC(Y218):DG(X202) DG(Y219):DC(X201) chainA ( 9) ASN9 0 0 0 0 0 2 9 8 6 0 0 0 0 0 0 0 0 0 0 ( 12) ALA12 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ALA13 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG17 0 0 0 0 0 0 0 0 3 10 7 0 0 0 0 0 0 0 0 prot.sequence kaerkrmrNriAAskSRkrkleriarleekvktlkaqnselastanmlreqvaqlkqk >2h7h_AB:Leucine_zipper_domain;A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=CRYSTAL STRUCTURE OF THE JUN BZIP HOMODIMER COMPLEXED WITH AP-1 DNA organism=Avian sarcoma virus DNA sequence DC(Y201):DG(X219) DG(Y202):DC(X218) DT(Y203):DA(X217) DC(Y204):DG(X216) DG(Y205):DC(X215) DA(Y206):DT(X214) DT(Y207):DA(X213) DG(Y208):DC(X212) DA(Y209):DT(X211) DG(Y210):DC(X210) DT(Y211):DA(X209) DC(Y212):DG(X208) DA(Y213):DT(X207) DT(Y214):DA(X206) DC(Y215):DG(X205) DG(Y216):DC(X204) DA(Y217):DT(X203) DC(Y218):DG(X202) DG(Y219):DC(X201) chainA ( 9) ASN9 0 0 0 0 0 2 9 8 6 0 0 0 0 0 0 0 0 0 0 ( 12) ALA12 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ALA13 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG17 0 0 0 0 0 0 0 0 3 10 7 0 0 0 0 0 0 0 0 chainB ( 9) ASN9 0 0 0 0 0 0 0 0 0 0 6 8 8 2 0 0 0 0 0 ( 12) ALA12 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 13) ALA13 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 17) ARG17 0 0 0 0 0 0 0 0 10 8 2 0 0 0 0 0 0 0 0 prot.sequence kaerkrmrNriAAskSRkrkleriarleekvktlkaqnselastanmlreqvaqlkqk/kaerkrmrNriAAskSRkrkleriarleekvktlkaqnselastanmlreqvaqlkqk >2h8c_B:Holliday_junction_resolvase_RusA; title=STRUCTURE OF RUSA D70N IN COMPLEX WITH DNA organism=Escherichia coli DNA sequence DC(X2):DG(W11) DC(X3):DG(W10) DG(X4):DC(W9) DG(X5):DC(W8) DT(X6):DA(W7) DA(X7):DT(W6) DC(X8):DG(W5) DC(X9):DG(W4) DG(X10):DC(W3) DG(X11):DC(W2) chainB ( 66) ARG67 0 0 0 3 0 0 0 0 0 0 prot.sequence ntysitlpwppsnnryyrhnrgrthvsaegqayrdnvariiknamldiglampvkiriechmpdrRrrnldnlqkaafdaltkagfwlddaqvvdyrvvkmpvtkggrleltitem >2h8r_AB:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=HEPATOCYTE NUCLEAR FACTOR 1B BOUND TO DNA: MODY5 GENE PRODUCT organism=Homo sapiens DNA sequence DC(F3):DG(E20) DT(F4):DA(E19) DG(F5):DC(E18) DG(F6):DC(E17) DT(F7):DA(E16) DG(F8):DC(E15) DA(F9):DT(E14) DA(F10):DT(E13) DT(F11):DA(E12) DT(F12):DA(E11) DA(F13):DT(E10) DT(F14):DA(E9) DT(F15):DA(E8) DA(F16):DT(E7) DA(F17):DT(E6) DC(F18):DG(E5) DC(F19):DG(E4) DA(F20):DT(E3) DA(F21):DT(E2) chainA ( 57) ASN146 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLN147 0 0 0 0 0 0 0 2 8 3 0 0 0 0 0 0 0 0 0 ( 59) SER148 0 0 0 0 0 2 5 6 0 0 0 0 0 0 0 0 0 0 0 ( 60) HIS149 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) SER151 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 63) GLN152 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR158 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ARG235 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 (165) TYR297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (166) ASN298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 (170) ASN302 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 1 0 0 0 (173) LYS305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 1 0 0 chainB ( 57) ASN146 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 58) GLN147 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 ( 59) SER148 0 0 0 0 0 0 0 0 0 0 0 8 4 5 0 0 0 0 0 ( 60) HIS149 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 62) SER151 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 63) GLN152 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 ( 69) THR158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (101) ARG235 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 (163) TYR297 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ASN302 0 0 0 3 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) LYS305 0 0 8 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence silkelqalnteeaaeqraevdrmlsedpwraakmikgymqqhnipqrevvdvtglNQSHlSQhlnkgTpmktqkraalytwyvrkqreilrqfnqtvmrrnRfkwgpasqqilyqaydrqknpskeerealveecnraeclqrgvspskahglgsnlvtevrvYNwfaNrrKeea/silkelqalnteeaaeqraevdrmlsedpwraakmikgymqqhnipqrevvdvtglNQSHlSQhlnkgTpmktqkraalytwyvrkqreilrqfnqmrrnRfkwgpasqqilyqaydrqknpskeerealveecnraeclqrgvspskahglgsnlvtevrvYnwfaNrrKeeafr >2h8r_B:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=HEPATOCYTE NUCLEAR FACTOR 1B BOUND TO DNA: MODY5 GENE PRODUCT organism=Homo sapiens DNA sequence DC(F3):DG(E20) DT(F4):DA(E19) DG(F5):DC(E18) DG(F6):DC(E17) DT(F7):DA(E16) DG(F8):DC(E15) DA(F9):DT(E14) DA(F10):DT(E13) DT(F11):DA(E12) DT(F12):DA(E11) DA(F13):DT(E10) DT(F14):DA(E9) DT(F15):DA(E8) DA(F16):DT(E7) DA(F17):DT(E6) DC(F18):DG(E5) DC(F19):DG(E4) DA(F20):DT(E3) DA(F21):DT(E2) chainB ( 57) ASN146 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 58) GLN147 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 ( 59) SER148 0 0 0 0 0 0 0 0 0 0 0 8 4 5 0 0 0 0 0 ( 60) HIS149 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 62) SER151 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 63) GLN152 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 ( 69) THR158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (101) ARG235 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 (163) TYR297 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ASN302 0 0 0 3 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) LYS305 0 0 8 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence silkelqalnteeaaeqraevdrmlsedpwraakmikgymqqhnipqrevvdvtglNQSHlSQhlnkgTpmktqkraalytwyvrkqreilrqfnqmrrnRfkwgpasqqilyqaydrqknpskeerealveecnraeclqrgvspskahglgsnlvtevrvYnwfaNrrKeeafr >2han_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL BASIS OF HETERODIMERIC ECDYSTEROID RECEPTOR INTERACTION WITH NATURAL RESPONSE ELEMENT HSP27 GENE PROMOTER organism=DROSOPHILA MELANOGASTER DNA sequence DA(C2):DT(D20) DA(C3):DT(D19) DG(C4):DC(D18) DG(C5):DC(D17) DG(C6):DC(D16) DT(C7):DA(D15) DT(C8):DA(D14) DC(C9):DG(D13) DA(C10):DT(D12) DA(C11):DT(D11) DT(C12):DA(D10) DG(C13):DC(D9) DC(C14):DG(D8) DA(C15):DT(D7) DC(C16):DG(D6) DT(C17):DA(D5) DT(C18):DA(D4) DG(C19):DC(D3) DT(C20):DA(D2) chainA ( 22) GLU25 0 0 0 0 1 7 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS28 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS32 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG33 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 ( 78) ARG81 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence khlcsicgdrasgkhygvyscEgcKgffKRtvrkdltyacrenrnciidkrqrnrcqycryqkcltcgmkreavqeeR >2han_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL BASIS OF HETERODIMERIC ECDYSTEROID RECEPTOR INTERACTION WITH NATURAL RESPONSE ELEMENT HSP27 GENE PROMOTER organism=DROSOPHILA MELANOGASTER DNA sequence DA(D2):DT(C20) DC(D3):DG(C19) DA(D4):DT(C18) DA(D5):DT(C17) DG(D6):DC(C16) DT(D7):DA(C15) DG(D8):DC(C14) DC(D9):DG(C13) DA(D10):DT(C12) DT(D11):DA(C11) DT(D12):DA(C10) DG(D13):DC(C9) DA(D14):DT(C8) DA(D15):DT(C7) DC(D16):DG(C6) DC(D17):DG(C5) DC(D18):DG(C4) DT(D19):DA(C3) DT(D20):DA(C2) chainA ( 22) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 6 7 1 0 0 0 0 ( 25) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 ( 29) LYS32 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 30) ARG33 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 ( 78) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 chainB ( 25) GLU25 0 0 0 0 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS28 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG32 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG33 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 ( 57) ARG57 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence khlcsicgdrasgkhygvyscEgcKgffKRtvrkdltyacrenrnciidkrqrnrcqycryqkcltcgmkreavqeeR/rvqeelclvcgdrasgyhynaltcEgcKgffRRsvtksavycckfgracemdmymrRkcqecrlkkclavgmrpecvvpenqcamkr >2han_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL BASIS OF HETERODIMERIC ECDYSTEROID RECEPTOR INTERACTION WITH NATURAL RESPONSE ELEMENT HSP27 GENE PROMOTER organism=DROSOPHILA MELANOGASTER DNA sequence DA(C2):DT(D20) DA(C3):DT(D19) DG(C4):DC(D18) DG(C5):DC(D17) DG(C6):DC(D16) DT(C7):DA(D15) DT(C8):DA(D14) DC(C9):DG(D13) DA(C10):DT(D12) DA(C11):DT(D11) DT(C12):DA(D10) DG(C13):DC(D9) DC(C14):DG(D8) DA(C15):DT(D7) DC(C16):DG(D6) DT(C17):DA(D5) DT(C18):DA(D4) DG(C19):DC(D3) DT(C20):DA(D2) chainB ( 25) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 3 4 2 0 0 0 0 ( 28) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 0 0 0 ( 32) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 33) ARG33 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 ( 57) ARG57 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence rvqeelclvcgdrasgyhynaltcEgcKgffRRsvtksavycckfgracemdmymrRkcqecrlkkclavgmrpecvvpenqcamkr >2hap_CD:Zn2/Cys6_DNA-binding_domain;Leucine_zipper_domain; title=STRUCTURE OF A HAP1-18/DNA COMPLEX REVEALS THAT PROTEIN/DNA INTERACTIONS CAN HAVE DIRECT ALLOSTERIC EFFECTS ON TRANSCRIPTIONAL ACTIVATION organism=Saccharomyces cerevisiae DNA sequence DA(A1):DT(B20) DC(A2):DG(B19) DG(A3):DC(B18) DC(A4):DG(B17) DT(A5):DA(B16) DA(A6):DT(B15) DT(A7):DA(B14) DT(A8):DA(B13) DA(A9):DT(B12) DT(A10):DA(B11) DC(A11):DG(B10) DG(A12):DC(B9) DC(A13):DG(B8) DT(A14):DA(B7) DA(A15):DT(B6) DT(A16):DA(B5) DT(A17):DA(B4) DA(A18):DT(B3) DG(A19):DC(B2) DT(A20):DA(B1) chainC ( 9) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 17) LYS71 0 0 0 0 0 0 0 0 0 0 10 11 14 0 0 0 0 0 0 0 ( 18) VAL72 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG57 0 0 0 0 0 0 0 7 11 13 0 0 0 0 0 0 0 0 0 0 ( 4) ARG59 0 0 0 0 0 1 6 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG63 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG70 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LYS71 0 10 13 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL72 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rkrnriplRcticrkrKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektlsk/kRnRiplRcticrkRKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektlsk >2hap_D:Leucine_zipper_domain;Zn2/Cys6_DNA-binding_domain; title=STRUCTURE OF A HAP1-18/DNA COMPLEX REVEALS THAT PROTEIN/DNA INTERACTIONS CAN HAVE DIRECT ALLOSTERIC EFFECTS ON TRANSCRIPTIONAL ACTIVATION organism=Saccharomyces cerevisiae DNA sequence DA(A1):DT(B20) DC(A2):DG(B19) DG(A3):DC(B18) DC(A4):DG(B17) DT(A5):DA(B16) DA(A6):DT(B15) DT(A7):DA(B14) DT(A8):DA(B13) DA(A9):DT(B12) DT(A10):DA(B11) DC(A11):DG(B10) DG(A12):DC(B9) DC(A13):DG(B8) DT(A14):DA(B7) DA(A15):DT(B6) DT(A16):DA(B5) DT(A17):DA(B4) DA(A18):DT(B3) DG(A19):DC(B2) DT(A20):DA(B1) chainD ( 2) ARG57 0 0 0 0 0 0 0 7 11 13 0 0 0 0 0 0 0 0 0 0 ( 4) ARG59 0 0 0 0 0 1 6 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG63 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG70 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LYS71 0 10 13 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL72 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kRnRiplRcticrkRKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektlsk >2hdc_A:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF TRANSCRIPTION FACTOR GENESIS/DNA COMPLEX organism=RATTUS NORVEGICUS DNA sequence DG(C349):DC(B265) DT(C350):DA(B264) DA(C351):DT(B263) DT(C352):DA(B262) DT(C353):DA(B261) DG(C354):DC(B260) DT(C355):DA(B259) DT(C356):DA(B258) DA(C357):DT(B257) DT(C358):DA(B256) DT(C359):DA(B255) DT(C360):DA(B254) DT(C361):DA(B253) DA(C362):DT(B252) DA(C363):DT(B251) DG(C364):DC(B250) DC(C365):DG(B249) chainA ( 47) GLN48 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 ( 48) ASN49 0 0 0 0 0 2 19 13 0 0 0 0 0 0 0 0 0 ( 49) SER50 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 ( 51) ARG52 0 0 0 0 13 10 2 0 0 0 0 0 0 0 0 0 0 ( 52) HIS53 0 0 0 0 0 0 0 5 27 15 0 0 0 0 0 0 0 ( 53) ASN54 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 ( 55) SER56 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 65) ARG66 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ARG98 0 0 0 0 0 0 0 0 0 0 3 11 11 4 0 0 0 prot.sequence vkppysyialitmailqspqkkltlsgicefisnrfpyyrekfpawQNSiRHNlSlndcfvkipRepgnpgkgnywtldpqsedmfdngsflrrrkR >2hdd_A:Homeodomain-like; title=ENGRAILED HOMEODOMAIN Q50K VARIANT DNA COMPLEX organism=Drosophila melanogaster DNA sequence DT(D23):DA(C21) DC(D24):DG(C20) DC(D25):DG(C19) DG(D26):DC(C18) DG(D27):DC(C17) DG(D28):DC(C16) DG(D29):DC(C15) DA(D30):DT(C14) DT(D31):DA(C13) DT(D32):DA(C12) DA(D33):DT(C11) DC(D34):DG(C10) DA(D35):DT(C9) DT(D36):DA(C8) DG(D37):DC(C7) DG(D38):DC(C6) DC(D39):DG(C5) DA(D40):DT(C4) DA(D41):DT(C3) DA(D42):DT(C2) chainA ( 1) ARG5 0 0 0 0 0 0 0 0 0 8 11 9 0 0 0 0 0 0 0 0 ( 43) ILE47 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 46) LYS50 0 0 0 0 0 6 7 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN51 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 prot.sequence RtafsseqlarlkrefnenrylterrrqqlsselglneaqiKIwfKNkrakikks >2hdd_AB:Homeodomain-like; title=ENGRAILED HOMEODOMAIN Q50K VARIANT DNA COMPLEX organism=Drosophila melanogaster DNA sequence DT(D23):DA(C21) DC(D24):DG(C20) DC(D25):DG(C19) DG(D26):DC(C18) DG(D27):DC(C17) DG(D28):DC(C16) DG(D29):DC(C15) DA(D30):DT(C14) DT(D31):DA(C13) DT(D32):DA(C12) DA(D33):DT(C11) DC(D34):DG(C10) DA(D35):DT(C9) DT(D36):DA(C8) DG(D37):DC(C7) DG(D38):DC(C6) DC(D39):DG(C5) DA(D40):DT(C4) DA(D41):DT(C3) DA(D42):DT(C2) chainA ( 1) ARG5 0 0 0 0 0 0 0 0 0 8 11 9 0 0 0 0 0 0 0 0 ( 43) ILE47 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 46) LYS50 0 0 0 0 0 6 7 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN51 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 chainB ( 46) ILE47 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS50 3 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN51 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RtafsseqlarlkrefnenrylterrrqqlsselglneaqiKIwfKNkrakikks/krprtafsseqlarlkrefnenrylterrrqqlsselglneaqikIwfKNkrakik >2heo_D:"Winged_helix"_DNA-binding_domain; title=GENERAL STRUCTURE-BASED APPROACH TO THE DESIGN OF PROTEIN LIGANDS: APPLICATION TO THE DESIGN OF KV1.2 POTASSIUM CHANNEL BLOCKERS. organism=Mus musculus DNA sequence DC(E201) DG(E202) DC(E203) DG(E204) DC(E205) DG(E206) chainD ( 39) TYR150 0 0 0 17 0 0 prot.sequence dnleqkilqvlsddggpvaifqlvkkcqvpkktlnqvlYrlkkedrvsspspkywsig >2hhq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=O6-METHYL-GUANINE:T PAIR IN THE POLYMERASE-10 BASEPAIR POSITION organism=Geobacillus stearothermophilus DNA sequence DC(C4):DG(B34) DC(C5):DG(B33) DT(C6):DA(B32) DG(C7):DC(B31) DA(C8):DT(B30) DC(C9):DG(B29) DT(C10):DA(B28) DC(C11):DG(B27) DG(C12):DC(B26) DT(C13):6OG(B25) DA(C14):DT(B24) DT(C15):DA(B23) DG(C16):DC(B22) chainA (286) LYS582 0 0 0 5 3 0 0 0 0 0 0 0 0 (291) TYR587 0 0 1 0 0 0 0 0 0 0 0 0 0 (319) ARG615 11 3 0 0 0 0 0 0 0 0 0 0 0 (329) ASN625 0 1 7 3 0 0 0 0 0 0 0 0 0 (333) ARG629 4 4 0 0 0 0 0 0 0 0 0 0 0 (418) TYR714 44 0 0 0 0 0 0 0 0 0 0 0 0 (501) GLN797 3 0 0 0 0 0 0 0 0 0 0 0 0 (533) HIS829 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2hhs_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=O6-METHYL:C PAIR IN THE POLYMERASE-10 BASEPAIR POSITION organism=Geobacillus stearothermophilus DNA sequence DC(C4):DG(B34) DC(C5):DG(B33) DT(C6):DA(B32) DG(C7):DC(B31) DA(C8):DT(B30) DC(C9):DG(B29) DT(C10):DA(B28) DC(C11):DG(B27) DG(C12):DC(B26) DC(C13):6OG(B25) DA(C14):DT(B24) DT(C15):DA(B23) DG(C16):DC(B22) chainA (286) LYS582 0 0 0 5 3 0 0 0 0 0 0 0 0 (291) TYR587 0 0 1 0 0 0 0 0 0 0 0 0 0 (319) ARG615 10 3 0 0 0 0 0 0 0 0 0 0 0 (329) ASN625 0 1 7 3 0 0 0 0 0 0 0 0 0 (414) PHE710 7 0 0 0 0 0 0 0 0 0 0 0 0 (418) TYR714 29 0 0 0 0 0 0 0 0 0 0 0 0 (501) GLN797 1 0 0 0 0 0 0 0 0 0 0 0 0 (533) HIS829 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2hht_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=C:O6-METHYL-GUANINE PAIR IN THE POLYMERASE-2 BASEPAIR POSITION organism=Geobacillus stearothermophilus DNA sequence DG(B19):DC(C17) DC(B20):DG(C16) DG(B21):DC(C15) DA(B22):DT(C14) DT(B23):DA(C13) DC(B24):DG(C12) DA(B25):DT(C11) DG(B26):DC(C10) DC(B27):DG(C9) DT(B28):DA(C8) DC(B29):6OG(C7) DG(B30):DC(C6) chainA (286) LYS582 0 0 0 0 0 0 0 3 3 0 0 0 (319) ARG615 0 0 0 0 0 0 0 0 0 0 1 10 (329) ASN625 0 0 0 0 0 0 0 0 3 4 1 0 (333) ARG629 0 0 0 0 0 0 0 0 0 0 8 3 (418) TYR714 0 0 0 0 0 0 0 0 0 0 0 42 (501) GLN797 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence kkmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2hhu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=C:O6-METHYL-GUANINE IN THE POLYMERASE POSTINSERTION SITE (-1 BASEPAIR POSITION) organism=Geobacillus stearothermophilus DNA sequence DC(C5):DC(B29) DG(C7):DC(B28) DG(C8):DC(B27) DC(C9):DG(B26) DT(C10):DA(B25) DG(C11):DC(B24) DA(C12):DT(B23) DT(C13):DA(B22) DC(C14):DG(B21) DG(C15):DC(B20) DC(C16):DG(B19) chainA (286) LYS582 0 0 0 6 2 0 0 0 0 0 0 (291) TYR587 0 0 1 0 0 0 0 0 0 0 0 (319) ARG615 5 4 0 0 0 0 0 0 0 0 0 (326) ASN622 0 0 1 0 0 0 0 0 0 0 0 (329) ASN625 0 1 7 2 0 0 0 0 0 0 0 (414) PHE710 1 0 0 0 0 0 0 0 0 0 0 (418) TYR714 5 0 0 0 0 0 0 0 0 0 0 (420) ILE716 3 0 0 0 0 0 0 0 0 0 0 (421) SER717 4 0 0 0 0 0 0 0 0 0 0 (425) LEU721 6 0 0 0 0 0 0 0 0 0 0 (428) ASN724 9 0 0 0 0 0 0 0 0 0 0 (533) HIS829 0 1 0 0 0 0 0 0 0 0 0 prot.sequence kkmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgISdygLaqNlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2hhv_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=T:O6-METHYL-GUANINE IN THE POLYMERASE-2 BASEPAIR POSITION organism=Geobacillus stearothermophilus DNA sequence DG(B19):DC(C17) DC(B20):DG(C16) DG(B21):DC(C15) DA(B22):DT(C14) DT(B23):DA(C13) DC(B24):DG(C12) DA(B25):DT(C11) DG(B26):DC(C10) DC(B27):DG(C9) DT(B28):DA(C8) DT(B29):6OG(C7) DG(B30):DC(C6) chainA (286) LYS582 0 0 0 0 0 0 0 3 6 0 0 0 (319) ARG615 0 0 0 0 0 0 0 0 0 0 3 11 (329) ASN625 0 0 0 0 0 0 0 0 3 4 1 0 (333) ARG629 0 0 0 0 0 0 0 0 0 0 13 4 (418) TYR714 0 0 0 0 0 0 0 0 0 0 0 46 (501) GLN797 0 0 0 0 0 0 0 0 0 0 0 4 (533) HIS829 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence kkmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2hhx_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=O6-METHYL-GUANINE IN THE POLYMERASE TEMPLATE PREINSERTION SITE organism=Geobacillus stearothermophilus DNA sequence DC(C4):DG(B29) DG(C5):DC(B28) DA(C6):DT(B27) DG(C7):DC(B26) DT(C8):DA(B25) DC(C9):DG(B24) DA(C10):DT(B23) DG(C11):DC(B22) DG(C12):DC(B21) chainA (280) LYS582 0 0 0 0 1 1 0 0 0 (313) ARG615 12 5 0 0 0 0 0 0 0 (323) ASN625 0 1 4 3 0 0 0 0 0 (327) ARG629 4 8 0 0 0 0 0 0 0 (412) TYR714 44 0 0 0 0 0 0 0 0 (495) GLN797 3 1 0 0 0 0 0 0 0 (527) HIS829 0 1 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepnlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2hmi_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE/FRAGMENT OF FAB 28/DNA COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(F821):DC(E819) DT(F822):DA(E818) DC(F823):DG(E817) DC(F824):DG(E816) DC(F825):DG(E815) DT(F826):DA(E814) DG(F827):DC(E813) DT(F828):DA(E812) DT(F829):DA(E811) DC(F830):DG(E810) DG(F831):DC(E809) DG(F832):DC(E808) DG(F833):DC(E807) DC(F834):DG(E806) DG(F835):DC(E805) DC(F836):DG(E804) DC(F837):DG(E803) DA(F838):DT(E802) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (184) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (258) GLN258 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (266) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (475) GLN475 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiQklvgklnWasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk/pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiQklvgklnWasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqle >2hof_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF THE PRE-CLEAVAGE SYNAPTIC COMPLEX IN THE CRE- LOXP SITE-SPECIFIC RECOMBINATION organism=Enterobacteria phage P1 DNA sequence DA(C2):DT(D35) DT(C3):DA(D34) DA(C4):DT(D33) DA(C5):DT(D32) DC(C6):DG(D31) DT(C7):DA(D30) DT(C8):DA(D29) DC(C9):DG(D28) DG(C10):DC(D27) DT(C11):DA(D26) DA(C12):DT(D25) DT(C13):DA(D24) DA(C14):DT(D23) DG(C15):DC(D22) DC(C16):DG(D21) DA(C17):DT(D20) DT(C18):DA(D19) DA(C19):DT(D18) DC(C20):DG(D17) DA(C21):DT(D16) DT(C22):DA(D15) DT(C23):DA(D14) DA(C24):DT(D13) DT(C25):DA(D12) DA(C26):DT(D11) DC(C27):DG(D10) DG(C28):DC(D9) DA(C29):DT(D8) DA(C30):DT(D7) DC(C31):DG(D6) DT(C32):DA(D5) DT(C33):DA(D4) DA(C34):DT(D3) DT(C35):DA(D2) chainA ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 6 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 7 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (212) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 9 (225) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (227) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 15 12 2 0 0 0 0 0 (230) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 (250) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 (288) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihikalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnIvmnyirnldsetgamvrlled >2hof_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF THE PRE-CLEAVAGE SYNAPTIC COMPLEX IN THE CRE- LOXP SITE-SPECIFIC RECOMBINATION organism=Enterobacteria phage P1 DNA sequence DA(C2):DT(D35) DT(C3):DA(D34) DA(C4):DT(D33) DA(C5):DT(D32) DC(C6):DG(D31) DT(C7):DA(D30) DT(C8):DA(D29) DC(C9):DG(D28) DG(C10):DC(D27) DT(C11):DA(D26) DA(C12):DT(D25) DT(C13):DA(D24) DA(C14):DT(D23) DG(C15):DC(D22) DC(C16):DG(D21) DA(C17):DT(D20) DT(C18):DA(D19) DA(C19):DT(D18) DC(C20):DG(D17) DA(C21):DT(D16) DT(C22):DA(D15) DT(C23):DA(D14) DA(C24):DT(D13) DT(C25):DA(D12) DA(C26):DT(D11) DC(C27):DG(D10) DG(C28):DC(D9) DA(C29):DT(D8) DA(C30):DT(D7) DC(C31):DG(D6) DT(C32):DA(D5) DT(C33):DA(D4) DA(C34):DT(D3) DT(C35):DA(D2) chainA ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 6 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 7 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (212) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 9 (225) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (227) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 15 12 2 0 0 0 0 0 (230) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 (250) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 (288) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 2 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 2 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 14 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 10 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG243 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 1 8 18 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihikalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnIvmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiQQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtatlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnamvrlled >2hoi_G:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF THE TETRAMERIC PRE-CLEAVAGE SYNAPTIC COMPLEX IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION organism=Enterobacteria phage P1 DNA sequence DA(F2):DT(E35) DT(F3):DA(E34) DA(F4):DT(E33) DA(F5):DT(E32) DG(F6):DC(E31) DT(F7):DA(E30) DT(F8):DA(E29) DC(F9):DG(E28) DG(F10):DC(E27) DT(F11):DA(E26) DA(F12):DT(E25) DT(F13):DA(E24) DA(F14):DT(E23) DA(F15):DT(E22) DT(F16):DA(E21) DG(F17):DC(E20) DT(F18):DA(E19) DA(F19):DT(E18) DT(F20):DA(E17) DG(F21):DC(E16) DC(F22):DG(E15) DT(F23):DA(E14) DA(F24):DT(E13) DT(F25):DA(E12) DA(F26):DT(E11) DC(F27):DG(E10) DG(F28):DC(E9) DA(F29):DT(E8) DA(F30):DT(E7) DG(F31):DC(E6) DT(F32):DA(E5) DT(F33):DA(E4) DA(F34):DT(E3) DT(F35):DA(E2) chainG ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 4 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 7 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 9 17 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtatlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnIvmnyirnldsetgamvrlled >2hoi_GH:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF THE TETRAMERIC PRE-CLEAVAGE SYNAPTIC COMPLEX IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION organism=Enterobacteria phage P1 DNA sequence DA(E2):DT(F35) DT(E3):DA(F34) DA(E4):DT(F33) DA(E5):DT(F32) DC(E6):DG(F31) DT(E7):DA(F30) DT(E8):DA(F29) DC(E9):DG(F28) DG(E10):DC(F27) DT(E11):DA(F26) DA(E12):DT(F25) DT(E13):DA(F24) DA(E14):DT(F23) DG(E15):DC(F22) DC(E16):DG(F21) DA(E17):DT(F20) DT(E18):DA(F19) DA(E19):DT(F18) DC(E20):DG(F17) DA(E21):DT(F16) DT(E22):DA(F15) DT(E23):DA(F14) DA(E24):DT(F13) DT(E25):DA(F12) DA(E26):DT(F11) DC(E27):DG(F10) DG(E28):DC(F9) DA(E29):DT(F8) DA(E30):DT(F7) DC(E31):DG(F6) DT(E32):DA(F5) DT(E33):DA(F4) DA(E34):DT(F3) DT(E35):DA(F2) chainG ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 4 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 7 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (225) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 (238) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 17 9 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 2 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG243 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 5 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 2 8 15 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) ALA260 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ASN319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtatlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnIvmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtatlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRAlEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvNivmnyirnldsetgamvrlled >2hos_A:Homeodomain-like; title=PHAGE-SELECTED HOMEODOMAIN BOUND TO UNMODIFIED DNA organism=Drosophila melanogaster DNA sequence DT(D23):DA(C21) DC(D24):DG(C20) DC(D25):DG(C19) DG(D26):DC(C18) DG(D27):DC(C17) DG(D28):DC(C16) DG(D29):DC(C15) DA(D30):DT(C14) DT(D31):DA(C13) DT(D32):DA(C12) DA(D33):DT(C11) DC(D34):DG(C10) DA(D35):DT(C9) DT(D36):DA(C8) DG(D37):DC(C7) DG(D38):DC(C6) DC(D39):DG(C5) DA(D40):DT(C4) DA(D41):DT(C3) DA(D42):DT(C2) chainA ( 1) ARG5 0 0 0 0 0 0 0 0 0 4 7 3 0 0 0 0 0 0 0 0 ( 46) LYS50 0 0 0 0 0 7 8 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN51 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 prot.sequence RtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKNmrakikkst >2hos_AB:Homeodomain-like; title=PHAGE-SELECTED HOMEODOMAIN BOUND TO UNMODIFIED DNA organism=Drosophila melanogaster DNA sequence DT(D23):DA(C21) DC(D24):DG(C20) DC(D25):DG(C19) DG(D26):DC(C18) DG(D27):DC(C17) DG(D28):DC(C16) DG(D29):DC(C15) DA(D30):DT(C14) DT(D31):DA(C13) DT(D32):DA(C12) DA(D33):DT(C11) DC(D34):DG(C10) DA(D35):DT(C9) DT(D36):DA(C8) DG(D37):DC(C7) DG(D38):DC(C6) DC(D39):DG(C5) DA(D40):DT(C4) DA(D41):DT(C3) DA(D42):DT(C2) chainA ( 1) ARG5 0 0 0 0 0 0 0 0 0 4 7 3 0 0 0 0 0 0 0 0 ( 46) LYS50 0 0 0 0 0 7 8 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN51 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 chainB ( 49) LYS50 5 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKNmrakikkst/krprtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKnmrakikks >2hot_A:Homeodomain-like; title=PHAGE SELECTED HOMEODOMAIN BOUND TO MODIFIED DNA organism=Drosophila melanogaster DNA sequence DT(D23):DA(C21) DC(D24):DG(C20) DC(D25):DG(C19) DG(D26):DC(C18) DG(D27):DC(C17) DG(D28):DC(C16) DG(D29):DC(C15) DA(D30):DT(C14) DT(D31):DA(C13) DT(D32):DA(C12) DA(D33):DT(C11) DC(D34):DG(C10) DA(D35):DT(C9) DT(D36):DA(C8) DG(D37):DC(C7) DG(D38):DC(C6) DC(D39):DG(C5) DA(D40):DT(C4) DA(D41):DT(C3) DA(D42):DT(C2) chainA ( 1) ARG5 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 0 0 ( 46) LYS50 0 0 0 0 0 6 8 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN51 0 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 prot.sequence RtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKNmrakikkst >2hot_AB:Homeodomain-like; title=PHAGE SELECTED HOMEODOMAIN BOUND TO MODIFIED DNA organism=Drosophila melanogaster DNA sequence DT(D23):DA(C21) DC(D24):DG(C20) DC(D25):DG(C19) DG(D26):DC(C18) DG(D27):DC(C17) DG(D28):DC(C16) DG(D29):DC(C15) DA(D30):DT(C14) DT(D31):DA(C13) DT(D32):DA(C12) DA(D33):DT(C11) DC(D34):DG(C10) DA(D35):DT(C9) DT(D36):DA(C8) DG(D37):DC(C7) DG(D38):DC(C6) DC(D39):DG(C5) DA(D40):DT(C4) DA(D41):DT(C3) DA(D42):DT(C2) chainA ( 1) ARG5 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 0 0 ( 46) LYS50 0 0 0 0 0 6 8 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN51 0 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 chainB ( 49) LYS50 3 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKNmrakikkst/krprtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKNmrakikks >2hr1_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=TERNARY STRUCTURE OF WT M.HHAI C5-CYTOSINE DNA METHYLTRANSFERASE WITH UNMODIFIED DNA AND ADOHCY organism=Haemophilus parahaemolyticus DNA sequence DG(D422):DC(C413) DA(D423):DT(C412) DT(D424):DA(C411) DA(D425):DT(C410) DG(D426):DC(C409) DG(D428):DC(C407) DC(D429):DG(C406) DT(D430):DA(C405) DA(D431):DT(C404) DT(D432):DA(C403) DC(D433):DG(C402) chainA ( 86) ILE86 0 0 3 2 1 0 0 0 0 0 0 ( 87) SER87 0 0 0 0 7 8 0 0 0 0 0 (228) ARG228 0 0 0 2 0 0 0 0 0 0 0 (237) GLN237 0 0 0 0 30 22 0 0 0 0 0 (239) GLU239 0 0 0 0 0 2 1 0 0 0 0 (240) ARG240 0 0 0 9 11 0 0 0 0 0 0 (254) TYR254 0 0 0 0 0 0 1 1 0 0 0 (260) ALA260 0 0 0 0 0 0 0 2 0 0 0 (296) SER296 0 0 0 0 0 0 0 0 1 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgERiystrgiaitlsaYgggifAktggylvngktrklhprecarvmgypdsykvhpstSqaykqfgnsvvinvlqyiaynigsslnfkpy >2ht0_AB:IHF-like_DNA-binding_proteins; title=IHF BOUND TO DOUBLY NICKED DNA organism=ESCHERICHIA COLI DNA sequence DG(C49):DC(F49) DG(C48):DC(F48) DT(C47):DA(F47) DG(C46):DC(F46) DC(C45):DG(F45) DA(C44):DT(F44) DA(C43):DT(F43) DC(C42):DG(F42) DA(C41):DT(F41) DA(C40):DT(F40) DA(C39):DT(F39) DT(C38):DA(F38) DT(D37):DA(F37) DG(D36):DC(F36) DA(D35):DT(F35) DT(D34):DA(F34) DA(D33):DT(F33) DA(D32):DT(F32) DG(D31):DC(F31) DC(D30):DG(F30) DA(D29):DT(E29) DA(D28):DT(E28) DT(D27):DA(E27) DG(D26):DC(E26) DC(D25):DG(E25) DT(D24):DA(E24) DT(D23):DA(E23) DT(D22):DA(E22) DT(D21):DA(E21) DT(D20):DA(E20) DT(D19):DA(E19) DG(D18):DC(E18) DG(D17):DC(E17) DC(D16):DG(E16) chainA ( 59) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN64 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 21 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS66 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 46) ARG46 0 0 0 0 7 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence altkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenaspk/mtkselierlatqqshipaktvedavkemlehmastlaqgerieiRgfgsfslhyrapRtgRNPKtgdkvelegkyvphfkpgkelrdraniy >2ht0_B:IHF-like_DNA-binding_proteins; title=IHF BOUND TO DOUBLY NICKED DNA organism=ESCHERICHIA COLI DNA sequence DG(C49):DC(F49) DG(C48):DC(F48) DT(C47):DA(F47) DG(C46):DC(F46) DC(C45):DG(F45) DA(C44):DT(F44) DA(C43):DT(F43) DC(C42):DG(F42) DA(C41):DT(F41) DA(C40):DT(F40) DA(C39):DT(F39) DT(C38):DA(F38) DT(D37):DA(F37) DG(D36):DC(F36) DA(D35):DT(F35) DT(D34):DA(F34) DA(D33):DT(F33) DA(D32):DT(F32) DG(D31):DC(F31) DC(D30):DG(F30) DA(D29):DT(E29) DA(D28):DT(E28) DT(D27):DA(E27) DG(D26):DC(E26) DC(D25):DG(E25) DT(D24):DA(E24) DT(D23):DA(E23) DT(D22):DA(E22) DT(D21):DA(E21) DT(D20):DA(E20) DT(D19):DA(E19) DG(D18):DC(E18) DG(D17):DC(E17) DC(D16):DG(E16) chainB ( 46) ARG46 0 0 0 0 7 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mtkselierlatqqshipaktvedavkemlehmastlaqgerieiRgfgsfslhyrapRtgRNPKtgdkvelegkyvphfkpgkelrdraniy >2hvi_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=DDCTP:G PAIR IN THE POLYMERASE ACTIVE SITE (0 POSITION) organism=Geobacillus stearothermophilus DNA sequence DC(B21):DG(C12) DC(B22):DG(C11) DT(B23):DA(C10) DG(B24):DC(C9) DA(B25):DT(C8) DC(B26):DG(C7) DT(B27):DA(C6) DC(B28):DG(C5) DDG(B29):DC(C4) DCT(A201):DG(C3) chainA (286) LYS582 0 0 0 0 3 5 0 0 0 0 (319) ARG615 0 0 0 0 0 0 0 3 12 0 (329) ASN625 0 0 0 0 0 3 4 1 0 0 (333) ARG629 0 0 0 0 0 0 0 8 4 0 (357) ASP653 0 0 0 0 0 0 0 0 0 7 (359) SER655 0 0 0 0 0 0 0 0 0 2 (360) GLN656 0 0 0 0 0 0 0 0 0 3 (361) ILE657 0 0 0 0 0 0 0 0 0 2 (386) HIS682 0 0 0 0 0 0 0 0 0 7 (406) ARG702 0 0 0 0 0 0 0 0 0 8 (410) LYS706 0 0 0 0 0 0 0 0 0 15 (411) ALA707 0 0 0 0 0 0 0 0 0 2 (414) TYR710 0 0 0 0 0 0 0 0 0 19 (418) TYR714 0 0 0 0 0 0 0 0 0 8 (420) ILE716 0 0 0 0 0 0 0 0 0 3 (497) ASN793 0 0 0 0 0 0 0 0 1 1 (501) GLN797 0 0 0 0 0 0 0 1 4 0 (533) HIS829 0 0 0 0 0 0 0 2 0 0 (534) ASP830 0 0 0 0 0 0 0 0 0 6 prot.sequence kkmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnYgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2hvs_AB:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain; title=STRUCTURE OF T4 RNA LIGASE 2 WITH NICKED 5'-ADENYLATED NUCLEIC ACID DUPLEX CONTAINING A 2'-DEOXYRIBONUCLEOTIDE AT THE NICK organism=Enterobacteria phage T4 DNA sequence DA(C1):DT(E248) DT(C2):DA(E247) DT(C3):DA(E246) DC(C4):DG(E245) DC(C5):DG(E244) DG(C6):DC(E243) DA(C7):DT(E242) DT(C8):DA(E241) DA(C9):DT(E240) DG(C10):DC(E239) DT(C11):DA(E238) DG(C12):DC(E237) DG(C13):DC(D136) DG(C14):OMC(D135) DG(C15):DC(D134) DT(C16):DA(D133) DC(C17):DG(D132) DG(C18):DC(D131) DC(C19):DG(D130) DA(C20):DT(D129) DA(C21):DT(D128) DT(C22):DA(D127) DT(C23):DA(D126) DG(C24):DC(D125) chainA ( 40) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 67) PHE66 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (107) GLN106 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainB (275) VAL290 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) GLN291 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) LEU294 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) LYS314 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) VAL318 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smfkkysslenhynskfieklyslgltggewvarekihgtnfsliierdkvtcakrtgpilpaedffgyeiilknyadsikavqdimetsavvsyqvfgefagpgiqknvdygdkdfyvfdiivttesgdvtyvddymmesfcntfkfkmapllgrgkfeeliklpndldsvvqdynftvdhaglvdankcvwnaeakgevftaegyvlkpcypswlrngnrvaikcknskfelseadnklvgilacyvtlnrvnnviskigeigpkdfgkvmgltvqdileetsregitltqadnpslikkelvkmvqdvlrpawiel/smfkkysslenhynskfieklyslgltggewvarekihgtnfsliierdkvtcakrtgpilpaedffgyeiilknyadsikavqdimetsavvsyqvfgefagpgiqknvdygdkdfyvfdiivttesgdvtyvddymmesfcntfkfkmapllgrgkfeeliklpndldsvvqdynftvdhaglvdankcvwnaeakgevftaegyvlkpcypswlrngnrvaikcknsklseadnklvgilacyvtlnrvnnviskigeigpkdfgkvmgltVQdiLeetsregitltqadnpsliKkelVkmvqdvlrpawielvs >2hvs_B:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain; title=STRUCTURE OF T4 RNA LIGASE 2 WITH NICKED 5'-ADENYLATED NUCLEIC ACID DUPLEX CONTAINING A 2'-DEOXYRIBONUCLEOTIDE AT THE NICK organism=Enterobacteria phage T4 DNA sequence DC(D125):DG(C24) DA(D126):DT(C23) DA(D127):DT(C22) DT(D128):DA(C21) DT(D129):DA(C20) DG(D130):DC(C19) DC(D131):DG(C18) DG(D132):DC(C17) DA(D133):DT(C16) DC(D134):DG(C15) OMC(D135):DG(C14) DC(D136):DG(C13) DC(E237):DG(C12) DA(E238):DT(C11) DC(E239):DG(C10) DT(E240):DA(C9) DA(E241):DT(C8) DT(E242):DA(C7) DC(E243):DG(C6) DG(E244):DC(C5) DG(E245):DC(C4) DA(E246):DT(C3) DA(E247):DT(C2) DT(E248):DA(C1) chainB (275) VAL290 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (276) GLN291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 (279) LEU294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (299) LYS314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 (303) VAL318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence smfkkysslenhynskfieklyslgltggewvarekihgtnfsliierdkvtcakrtgpilpaedffgyeiilknyadsikavqdimetsavvsyqvfgefagpgiqknvdygdkdfyvfdiivttesgdvtyvddymmesfcntfkfkmapllgrgkfeeliklpndldsvvqdynftvdhaglvdankcvwnaeakgevftaegyvlkpcypswlrngnrvaikcknsklseadnklvgilacyvtlnrvnnviskigeigpkdfgkvmgltVQdiLeetsregitltqadnpsliKkelVkmvqdvlrpawielvs >2hw3_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=T:O6-METHYL-GUANINE PAIR IN THE POLYMERASE POSTINSERTION SITE (-1 BASEPAIR POSITION) organism=Geobacillus stearothermophilus DNA sequence DA(C7):DT(B28) DG(C8):DC(B27) DC(C9):DG(B26) DT(C10):DA(B25) DG(C11):DC(B24) DA(C12):DT(B23) DT(C13):DA(B22) DC(C14):DG(B21) DG(C15):DC(B20) DC(C16):DG(B19) chainA (286) LYS582 0 0 6 3 0 0 0 0 0 0 (291) TYR587 0 1 0 0 0 0 0 0 0 0 (319) ARG615 2 0 0 0 0 0 0 0 0 0 (326) ASN622 0 1 0 0 0 0 0 0 0 0 (329) ASN625 1 7 2 0 0 0 0 0 0 0 prot.sequence kkmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2hzv_A:ACT-like;Ribbon-helix-helix; title=NIKR-OPERATOR DNA COMPLEX organism=Escherichia coli DNA sequence DA(J1):DT(I30) DG(J2):DC(I29) DT(J3):DA(I28) DA(J4):DT(I27) DT(J5):DA(I26) DG(J6):DC(I25) DA(J7):DT(I24) DC(J8):DG(I23) DG(J9):DC(I22) DA(J10):DT(I21) DT(J11):DA(I20) DT(J12):DA(I19) DT(J13):DA(I18) DT(J14):DA(I17) DA(J15):DT(I16) DA(J16):DT(I15) DG(J17):DC(I14) DT(J18):DA(I13) DA(J19):DT(I12) DT(J20):DA(I11) DT(J21):DA(I10) DC(J22):DG(I9) DG(J23):DC(I8) DT(J24):DA(I7) DC(J25):DG(I6) DA(J26):DT(I5) DT(J27):DA(I4) DA(J28):DT(I3) DC(J29):DG(I2) DT(J30):DA(I1) chainA ( 3) ARG3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 14 0 0 0 0 ( 5) THR5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 4 0 0 ( 7) THR7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 prot.sequence mqRvTiTldddlletldslsqrrgynnrseairdilrsalaqeatqqhgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgdvqhfaddviaqrgvrhghlqclpk >2hzv_ABCD:ACT-like;Ribbon-helix-helix; title=NIKR-OPERATOR DNA COMPLEX organism=Escherichia coli DNA sequence DA(J1):DT(I30) DG(J2):DC(I29) DT(J3):DA(I28) DA(J4):DT(I27) DT(J5):DA(I26) DG(J6):DC(I25) DA(J7):DT(I24) DC(J8):DG(I23) DG(J9):DC(I22) DA(J10):DT(I21) DT(J11):DA(I20) DT(J12):DA(I19) DT(J13):DA(I18) DT(J14):DA(I17) DA(J15):DT(I16) DA(J16):DT(I15) DG(J17):DC(I14) DT(J18):DA(I13) DA(J19):DT(I12) DT(J20):DA(I11) DT(J21):DA(I10) DC(J22):DG(I9) DG(J23):DC(I8) DT(J24):DA(I7) DC(J25):DG(I6) DA(J26):DT(I5) DT(J27):DA(I4) DA(J28):DT(I3) DC(J29):DG(I2) DT(J30):DA(I1) chainA ( 3) ARG3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 14 0 0 0 0 ( 5) THR5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 4 0 0 ( 7) THR7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 chainB ( 3) ARG3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 1 ( 5) THR5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 2 0 0 0 0 ( 7) THR7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 chainC ( 3) ARG3 0 0 0 0 7 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) THR5 0 0 3 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) THR7 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG3 1 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) THR5 0 0 0 0 3 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) THR7 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mqRvTiTldddlletldslsqrrgynnrseairdilrsalaqeatqqhgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgdvqhfaddviaqrgvrhghlqclpk/mqRvTiTldddlletldslsqrrgynnrseairdilrsalaqeatqqhgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgdvqhfaddviaqrgvrhghlqclpk/mqRvTiTldddlletldslsqrrgynnrseairdilrsalaqeatqqhgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgdvqhfaddviaqrgvrhghlqclpk/mqRvTiTldddlletldslsqrrgynnrseairdilrsalaqeatqqhgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgdvqhfaddviaqrgvrhghlqclpk >2hzv_EFGH:ACT-like;Ribbon-helix-helix; title=NIKR-OPERATOR DNA COMPLEX organism=Escherichia coli DNA sequence DA(L1):DT(K30) DG(L2):DC(K29) DT(L3):DA(K28) DA(L4):DT(K27) DT(L5):DA(K26) DG(L6):DC(K25) DA(L7):DT(K24) DC(L8):DG(K23) DG(L9):DC(K22) DA(L10):DT(K21) DT(L11):DA(K20) DT(L12):DA(K19) DT(L13):DA(K18) DT(L14):DA(K17) DA(L15):DT(K16) DA(L16):DT(K15) DG(L17):DC(K14) DT(L18):DA(K13) DA(L19):DT(K12) DT(L20):DA(K11) DT(L21):DA(K10) DC(L22):DG(K9) DG(L23):DC(K8) DT(L24):DA(K7) DC(L25):DG(K6) DA(L26):DT(K5) DT(L27):DA(K4) DA(L28):DT(K3) DC(L29):DG(K2) DT(L30):DA(K1) chainE ( 3) ARG3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 3 0 0 0 0 ( 5) THR5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 4 0 0 ( 7) THR7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 chainF ( 3) ARG3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 9 5 ( 5) THR5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 6 0 0 0 0 ( 7) THR7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 chainG ( 3) ARG3 0 0 0 0 5 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) THR5 0 0 3 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) THR7 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG3 1 10 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) THR5 0 0 0 0 3 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) THR7 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mqRvTiTldddlletldslsqrrgynnrseairdilrsalaqeatqqhgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgdvqhfaddviaqrgvrhghlqclpk/mqRvTiTldddlletldslsqrrgynnrseairdilrsalaqeatqqhgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgdvqhfaddviaqrgvrhghlqclpk/mqRvTiTldddlletldslsqrrgynnrseairdilrsalaqeatqqhgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgdvqhfaddviaqrgvrhghlqclpk/mqRvTiTldddlletldslsqrrgynnrseairdilrsalaqeatqqhgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgdvqhfaddviaqrgvrhghlqclpk >2i05_A:Replication_terminator_protein_Tus; title=ESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN (TUS) COMPLEXED WITH TERA DNA organism=Escherichia coli DNA sequence DA(C328):DT(B325) DG(C329):DC(B324) DT(C330):DA(B323) DA(C331):DT(B322) DT(C332):DA(B321) DG(C333):DC(B320) DT(C334):DA(B319) DT(C335):DA(B318) DG(C336):DC(B317) DT(C337):DA(B316) DA(C338):DT(B315) DA(C339):DT(B314) DC(C340):DG(B313) DT(C341):DA(B312) chainA ( 85) LYS89 0 0 0 7 4 0 0 0 0 0 0 0 0 0 ( 89) ARG93 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (132) THR136 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (149) LEU153 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (169) ALA173 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (171) LYS175 0 0 0 0 0 0 0 0 3 8 7 1 0 0 (173) ILE177 0 0 0 0 0 0 2 4 0 0 0 0 0 0 (174) ILE178 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (194) ARG198 7 3 0 0 0 0 0 0 0 0 0 0 0 0 (228) ARG232 0 0 0 0 18 7 0 0 0 0 0 0 0 0 (230) VAL234 0 0 0 0 0 0 4 3 0 0 0 0 0 0 (233) GLN237 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (235) ILE239 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (237) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 4 6 (246) GLN250 0 0 0 0 0 0 0 0 0 0 0 0 1 9 (248) GLN252 0 0 0 0 0 0 0 0 0 2 9 4 1 0 (250) ALA254 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (284) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (285) TYR289 0 0 0 0 0 0 0 0 0 0 0 0 3 10 prot.sequence dlvdrlnttfrqmeqelaifaahleqhkllvarvfslpevkkedehnplnrievkqhlgndaqslalrhfrhlfiqqqsenrssKaavRlpgvlcyqvdnlsqaalvshiqhinklkttfehivtveselpTaarfewvhrhlpglitLnayrtltvlhdpatlrfgwAnKhIIknlhrdevlaqlekslkspRsvapwtreewqrklereyqdiaalpqnaklkikRpVkvQpIaRvwykgdqkQvQhAcptplialinrdngagvpdvgellnydadnvqhRYkpqaqplrliiprlhlyvad >2i06_A:Replication_terminator_protein_Tus; title=ESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN (TUS) COMPLEXED WITH DNA- LOCKED FORM organism=Escherichia coli DNA sequence DA(B312):DT(C341) DG(B313):DC(C340) DT(B314):DA(C339) DT(B315):DA(C338) DA(B316):DT(C337) DC(B317):DG(C336) DA(B318):DT(C335) DA(B319):DT(C334) DC(B320):DG(C333) DA(B321):DT(C332) DT(B322):DA(C331) chainA ( 85) LYS89 0 0 0 0 0 0 0 0 1 4 7 ( 89) ARG93 0 0 0 0 0 0 1 0 0 0 0 (132) THR136 0 0 0 0 0 0 0 0 0 0 1 (149) LEU153 0 0 0 0 0 0 0 0 1 0 0 (169) ALA173 0 0 1 0 0 0 0 0 0 0 0 (171) LYS175 0 0 1 9 9 4 0 0 0 0 0 (173) ILE177 0 0 0 0 0 0 4 4 0 0 0 (174) ILE178 0 0 0 0 1 5 0 0 0 0 0 (228) ARG232 0 0 0 0 0 0 0 0 8 24 0 (230) VAL234 0 0 0 0 0 0 4 6 0 0 0 (233) GLN237 0 0 0 0 0 0 4 0 0 0 0 (235) ILE239 0 2 1 0 0 0 0 0 0 0 0 (237) ARG241 6 4 0 0 0 0 0 0 0 0 0 (246) GLN250 14 4 0 0 0 0 0 0 0 0 0 (248) GLN252 0 2 5 8 1 0 0 0 0 0 0 (284) ARG288 2 0 0 0 0 0 0 0 0 0 0 (285) TYR289 8 2 0 0 0 0 0 0 0 0 0 (287) PRO291 0 0 1 0 0 0 0 0 0 0 0 prot.sequence dlvdrlnttfrqmeqelaifaahleqhkllvarvfslpevkkedehnplnrievkqhlgndaqslalrhfrhlfiqqqsenrssKaavRlpgvlcyqvdnlsqaalvshiqhinklkttfehivtveselpTaarfewvhrhlpglitLnayrtltvlhdpatlrfgwAnKhIIknlhrdevlaqlekslksprsvapwtreewqrklereyqdiaalpqnaklkikRpVkvQpIaRvwykgdqkQvQhacptplialinrdngagvpdvgellnydadnvqhRYkPqaqplrliiprlhlyvad >2i0q_A:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF A TELOMERE SINGLE-STRAND DNA-PROTEIN COMPLEX FROM O. NOVA WITH FULL-LENGTH ALPHA AND BETA TELOMERE PROTEINS organism=STERKIELLA NOVA DNA sequence DG(D15) DG(D14) DG(D13) DT(D12) DT(D11) DT(D10) DT(D9) DG(D8) DG(D6) DG(D7):DG(D8) chainA ( 26) ASP60 0 0 0 0 0 0 0 0 0 1 ( 28) THR62 0 0 0 0 0 0 0 3 0 3 ( 29) PHE63 9 0 0 0 0 0 0 0 0 0 ( 31) TYR65 0 0 0 0 0 0 0 5 0 5 ( 32) LYS66 0 0 0 4 0 0 0 0 0 0 ( 38) TYR72 0 0 0 10 0 0 0 0 0 0 ( 43) LYS77 0 0 0 0 0 0 0 0 0 7 ( 73) PHE107 6 0 0 1 0 0 0 0 0 0 ( 78) ILE112 6 0 0 0 0 0 0 0 0 0 ( 80) HIS114 2 0 0 0 0 0 0 0 0 0 ( 94) ARG128 0 0 0 0 0 0 0 0 1 0 ( 96) TYR130 0 0 0 0 0 0 0 0 38 0 (101) GLN135 0 0 0 0 0 0 0 0 11 0 (189) ASP223 0 0 0 0 0 0 0 11 0 16 (191) ASP225 0 0 0 0 0 0 0 0 0 14 (203) ASP237 0 2 0 0 0 0 0 0 0 0 (205) TYR239 0 44 0 0 0 0 0 0 0 0 (206) THR240 0 2 0 0 0 0 0 0 0 0 (224) LEU258 0 2 0 0 0 0 0 0 0 0 (226) LEU260 12 0 0 0 0 0 0 0 0 0 (227) LYS261 2 0 0 0 0 0 0 0 0 0 (229) PRO263 1 0 0 0 0 0 0 0 0 0 (238) ARG272 0 0 0 0 0 0 0 0 0 3 (240) ARG274 0 0 0 0 0 0 0 13 0 46 (241) SER275 0 0 0 0 0 0 0 7 0 8 (257) SER291 0 0 0 0 0 0 1 0 0 0 (258) HIS292 0 0 0 0 0 31 5 0 0 0 (259) TYR293 0 0 0 0 0 0 19 41 0 41 prot.sequence kyeyvelakasltsaqpqhfyavviDaTFpYKtnqerYicslKivdptlylkqqkgagdasdyatlvlyakrFedlpIiHragdiirvhratlRlYngqrQfnanvfyssswalfstdkrsvtqeinnqdavsdttpfsfsskhatiekneisilqnlrkwanqyfssysvissdmytalnkaqaqkgDfDvvakilqvhelDeYTnelklkdasgqvfytlsLkLKfPhvrtgevvRiRSatydetstqkkvlilSHYsniitfiqssklakelrakiqddhsvevaslkknvslnavvltevdkkhaalpstslqdlfhhadsdkelqaqdtfrtqfyvtkiepsdvkewvkgydrktkkssslkgasgkgdnifqvqflvkdastqlnnntyrvllytqdglganffnvkadnlhknadarkkledsaelltkfnsyvdavverrngfylikdtkliy >2i0q_AB:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF A TELOMERE SINGLE-STRAND DNA-PROTEIN COMPLEX FROM O. NOVA WITH FULL-LENGTH ALPHA AND BETA TELOMERE PROTEINS organism=STERKIELLA NOVA DNA sequence DG(D15) DG(D14) DG(D13) DT(D12) DT(D11) DT(D10) DT(D9) DG(D8) DG(D6) DG(D7):DG(D8) chainA ( 26) ASP60 0 0 0 0 0 0 0 0 0 1 ( 28) THR62 0 0 0 0 0 0 0 3 0 3 ( 29) PHE63 9 0 0 0 0 0 0 0 0 0 ( 31) TYR65 0 0 0 0 0 0 0 5 0 5 ( 32) LYS66 0 0 0 4 0 0 0 0 0 0 ( 38) TYR72 0 0 0 10 0 0 0 0 0 0 ( 43) LYS77 0 0 0 0 0 0 0 0 0 7 ( 73) PHE107 6 0 0 1 0 0 0 0 0 0 ( 78) ILE112 6 0 0 0 0 0 0 0 0 0 ( 80) HIS114 2 0 0 0 0 0 0 0 0 0 ( 94) ARG128 0 0 0 0 0 0 0 0 1 0 ( 96) TYR130 0 0 0 0 0 0 0 0 38 0 (101) GLN135 0 0 0 0 0 0 0 0 11 0 (189) ASP223 0 0 0 0 0 0 0 11 0 16 (191) ASP225 0 0 0 0 0 0 0 0 0 14 (203) ASP237 0 2 0 0 0 0 0 0 0 0 (205) TYR239 0 44 0 0 0 0 0 0 0 0 (206) THR240 0 2 0 0 0 0 0 0 0 0 (224) LEU258 0 2 0 0 0 0 0 0 0 0 (226) LEU260 12 0 0 0 0 0 0 0 0 0 (227) LYS261 2 0 0 0 0 0 0 0 0 0 (229) PRO263 1 0 0 0 0 0 0 0 0 0 (238) ARG272 0 0 0 0 0 0 0 0 0 3 (240) ARG274 0 0 0 0 0 0 0 13 0 46 (241) SER275 0 0 0 0 0 0 0 7 0 8 (257) SER291 0 0 0 0 0 0 1 0 0 0 (258) HIS292 0 0 0 0 0 31 5 0 0 0 (259) TYR293 0 0 0 0 0 0 19 41 0 41 chainB ( 36) LYS44 0 0 1 0 2 0 0 0 0 0 ( 37) GLU45 0 0 14 0 5 0 0 0 0 0 ( 40) PRO48 0 0 1 0 0 0 0 0 0 0 ( 41) HIS49 0 0 13 0 0 0 0 0 0 0 ( 43) LEU51 0 0 3 0 0 0 0 0 0 0 ( 50) PHE58 0 0 2 0 0 0 0 0 0 0 ( 98) PHE106 0 0 6 0 0 0 0 0 0 0 (101) TYR109 0 4 0 0 0 0 0 0 0 0 (126) TYR134 0 0 0 0 1 3 31 0 0 0 (132) ARG140 0 35 0 0 0 0 0 0 0 0 (137) LYS145 0 6 0 0 0 0 0 0 0 0 prot.sequence kyeyvelakasltsaqpqhfyavviDaTFpYKtnqerYicslKivdptlylkqqkgagdasdyatlvlyakrFedlpIiHragdiirvhratlRlYngqrQfnanvfyssswalfstdkrsvtqeinnqdavsdttpfsfsskhatiekneisilqnlrkwanqyfssysvissdmytalnkaqaqkgDfDvvakilqvhelDeYTnelklkdasgqvfytlsLkLKfPhvrtgevvRiRSatydetstqkkvlilSHYsniitfiqssklakelrakiqddhsvevaslkknvslnavvltevdkkhaalpstslqdlfhhadsdkelqaqdtfrtqfyvtkiepsdvkewvkgydrktkkssslkgasgkgdnifqvqflvkdastqlnnntyrvllytqdglganffnvkadnlhknadarkkledsaelltkfnsyvdavverrngfylikdtkliy/qqqsafkqlytelfnnegdfskvssnlkkplkcyvKEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >2i0q_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF A TELOMERE SINGLE-STRAND DNA-PROTEIN COMPLEX FROM O. NOVA WITH FULL-LENGTH ALPHA AND BETA TELOMERE PROTEINS organism=STERKIELLA NOVA DNA sequence DG(D15) DG(D14) DG(D13) DT(D12) DT(D11) DT(D10) DT(D9) DG(D8) DG(D6) DG(D7):DG(D8) chainB ( 36) LYS44 0 0 1 0 2 0 0 0 0 0 ( 37) GLU45 0 0 14 0 5 0 0 0 0 0 ( 40) PRO48 0 0 1 0 0 0 0 0 0 0 ( 41) HIS49 0 0 13 0 0 0 0 0 0 0 ( 43) LEU51 0 0 3 0 0 0 0 0 0 0 ( 50) PHE58 0 0 2 0 0 0 0 0 0 0 ( 98) PHE106 0 0 6 0 0 0 0 0 0 0 (101) TYR109 0 4 0 0 0 0 0 0 0 0 (126) TYR134 0 0 0 0 1 3 31 0 0 0 (132) ARG140 0 35 0 0 0 0 0 0 0 0 (137) LYS145 0 6 0 0 0 0 0 0 0 0 prot.sequence qqqsafkqlytelfnnegdfskvssnlkkplkcyvKEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg >2i13_A:C2H2_and_C2HC_zinc_fingers; title=AART, A SIX FINGER ZINC FINGER DESIGNED TO RECOGNIZE ANN TRIPLETS organism=MUS MUSCULUS DNA sequence DC(D2):DG(C22) DC(D3):DG(C21) DC(D4):DG(C20) DG(D5):DC(C19) DG(D6):DC(C18) DG(D7):DC(C17) DC(D8):DG(C16) DT(D9):DA(C15) DT(D10):DA(C14) DT(D11):DA(C13) DT(D12):DA(C12) DC(D13):DG(C11) DC(D14):DG(C10) DC(D15):DG(C9) DT(D16):DA(C8) DA(D17):DT(C7) DC(D18):DG(C6) DA(D19):DT(C5) DT(D20):DA(C4) DC(D21):DG(C3) DT(D22):DA(C2) chainA ( 3) ARG33 5 12 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ASP35 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) HIS36 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LYS63 0 0 7 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ASP64 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG67 0 0 0 0 0 4 13 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLN89 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG90 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ALA91 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN92 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 ( 84) GLN117 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 ( 86) ALA119 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 ( 87) HIS120 0 0 0 0 0 0 0 0 0 0 1 13 16 0 0 0 0 0 0 0 0 (112) ARG145 0 0 0 0 0 0 0 0 0 0 0 0 2 12 17 0 0 0 0 0 0 (114) ASP147 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 (115) ASN148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 (118) THR151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (140) ARG173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 15 0 0 0 (141) ARG174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (142) ASP175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 6 2 0 0 0 0 (143) ALA176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence fsRsDHlaehqrthkpykcpecgksfsdkKDltRhqrthtgekpykcpecgksfsQRANlrahqrthtgekpyacpecgksfsQlAHlrahqrthtgekpykcpecgksfsReDNlhThqrthtgekpykcpecgksfsRRDAlnvhqrth >2i3p_AB:Homing_endonucleases; title=K28R MUTANT OF HOMING ENDONUCLEASE I-CREI organism=Chlamydomonas reinhardtii DNA sequence DC(D551):DG(C524) DG(D552):DC(C523) DA(D553):DT(C522) DA(D554):DT(C521) DA(D555):DT(C520) DT(D556):DA(C519) DT(D557):DA(C518) DG(D558):DC(C517) DT(D559):DA(C516) DC(D560):DG(C515) DT(D561):DA(C514) DC(D562):DG(C513) DA(D563):DT(C512) DC(D564):DG(C511) DG(D565):DC(C510) DA(D566):DT(C509) DC(D567):DG(C508) DG(D568):DC(C507) DA(D569):DT(C506) DT(D570):DA(C505) DT(D571):DA(C504) DT(D572):DA(C503) DG(D573):DC(C502) DC(D574):DG(C501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG28 0 0 0 0 7 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 14 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 13 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 15 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 25) GLN326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 ( 27) ARG328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 8 0 0 0 0 ( 29) ASN330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 31) SER332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 ( 32) TYR333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 20 0 ( 37) GLN338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 5 0 0 ( 43) GLN344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 ( 45) THR346 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 65) TYR366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 67) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 10 0 0 0 0 0 0 ( 69) ARG370 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 12 0 0 0 0 0 0 0 0 ( 72) VAL373 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (138) LYS439 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 (139) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiRpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiRpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >2i3p_B:Homing_endonucleases; title=K28R MUTANT OF HOMING ENDONUCLEASE I-CREI organism=Chlamydomonas reinhardtii DNA sequence DC(D551):DG(C524) DG(D552):DC(C523) DA(D553):DT(C522) DA(D554):DT(C521) DA(D555):DT(C520) DT(D556):DA(C519) DT(D557):DA(C518) DG(D558):DC(C517) DT(D559):DA(C516) DC(D560):DG(C515) DT(D561):DA(C514) DC(D562):DG(C513) DA(D563):DT(C512) DC(D564):DG(C511) DG(D565):DC(C510) DA(D566):DT(C509) DC(D567):DG(C508) DG(D568):DC(C507) DA(D569):DT(C506) DT(D570):DA(C505) DT(D571):DA(C504) DT(D572):DA(C503) DG(D573):DC(C502) DC(D574):DG(C501) chainB ( 21) SER322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 25) GLN326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 ( 27) ARG328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 8 0 0 0 0 ( 29) ASN330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 31) SER332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 ( 32) TYR333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 20 0 ( 37) GLN338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 5 0 0 ( 43) GLN344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 ( 45) THR346 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 65) TYR366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 67) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 10 0 0 0 0 0 0 ( 69) ARG370 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 12 0 0 0 0 0 0 0 0 ( 72) VAL373 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (138) LYS439 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 (139) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiRpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >2i3q_A:Homing_endonucleases; title=Q44V MUTANT OF HOMING ENDONUCLEASE I-CREI organism=Chlamydomonas reinhardtii DNA sequence DG(C501):DC(D574) DC(C502):DG(D573) DA(C503):DT(D572) DA(C504):DT(D571) DA(C505):DT(D570) DA(C506):DT(D569) DC(C507):DG(D568) DG(C508):DC(D567) DA(C509):DT(D566) DC(C510):DG(D565) DG(C511):DC(D564) DT(C512):DA(D563) DG(C513):DC(D562) DA(C514):DT(D561) DG(C515):DC(D560) DT(C516):DA(D559) DC(C517):DG(D558) DA(C518):DT(D557) DG(C519):DC(D556) DT(C520):DA(D555) DT(C521):DA(D554) DT(C522):DA(D553) DC(C523):DG(D552) DG(C524):DC(D551) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 14 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 4 0 0 ( 43) VAL44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 8 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 12 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 ( 74) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiapNqSYkfkhQlSltfVvTqktqrrwfldklvdeigvgYvRdRgsVsDyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >2i3q_AB:Homing_endonucleases; title=Q44V MUTANT OF HOMING ENDONUCLEASE I-CREI organism=Chlamydomonas reinhardtii DNA sequence DC(D551):DG(C524) DG(D552):DC(C523) DA(D553):DT(C522) DA(D554):DT(C521) DA(D555):DT(C520) DC(D556):DG(C519) DT(D557):DA(C518) DG(D558):DC(C517) DA(D559):DT(C516) DC(D560):DG(C515) DT(D561):DA(C514) DC(D562):DG(C513) DA(D563):DT(C512) DC(D564):DG(C511) DG(D565):DC(C510) DT(D566):DA(C509) DC(D567):DG(C508) DG(D568):DC(C507) DT(D569):DA(C506) DT(D570):DA(C505) DT(D571):DA(C504) DT(D572):DA(C503) DG(D573):DC(C502) DC(D574):DG(C501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 14 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 4 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) VAL44 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 8 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 12 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP75 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 23) ILE324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 25) GLN326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 ( 27) ALA328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) ASN330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 31) SER332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 ( 32) TYR333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 20 0 ( 37) GLN338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 7 0 0 ( 43) VAL344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 45) THR346 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 ( 67) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 7 0 0 0 0 0 0 ( 69) ARG370 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 10 0 0 0 0 0 0 0 0 ( 72) VAL373 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 ( 74) ASP375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (138) LYS439 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (139) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiapNqSYkfkhQlSltfVvTqktqrrwfldklvdeigvgYvRdRgsVsDyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiApNqSYkfkhQlSltfVvTqktqrrwfldklvdeigvgyvRdRgsVsDyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >2i5w_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURE OF HOGG1 CROSSLINKED TO DNA SAMPLING A NORMAL G ADJACENT TO AN OXOG organism=Homo sapiens DNA sequence DG(E2):DC(F29) DT(E3):DA(F28) DA(E4):DT(F27) DG(E5):DC(F26) DA(E6):DT(F25) DC(E7):8OG(F24) DT(E9):DA(F22) DG(E10):DC(F21) DG(E11):DC(F20) chainA (136) SER148 0 0 0 0 0 8 0 0 0 (137) CYS149 0 0 0 0 0 6 3 0 0 (191) TYR203 0 0 0 0 0 25 0 0 0 (195) TYR207 0 0 0 0 1 2 0 0 0 (281) PRO293 0 2 0 0 0 0 0 0 0 prot.sequence sefghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficssCnniaritgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYrarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaqavlfsadl >2i9g_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA WITH A BENZO[C]PHENANTHRENE DIOL EPOXIDE ADDUCTED GUANINE BASE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 26) HIS34 0 0 0 0 36 ( 27) LYS35 0 0 0 0 7 ( 30) ALA38 0 0 0 0 5 prot.sequence etlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >2i9k_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=ENGINEERED EXTRAHELICAL BASE DESTABILIZATION ENHANCES SEQUENCE DISCRIMINATION OF DNA METHYLTRANSFERASE M.HHAI organism=HAEMOPHILUS HAEMOLYTICUS DNA sequence DG(C402):DC(D433) DA(C403):DT(D432) DT(C404):DA(D431) DA(C405):DT(D430) DG(C406):DC(D429) DC(C407):DG(D428) DC(C409):DG(D426) DT(C410):DA(D425) DA(C411):DT(D424) DT(C412):DA(D423) DC(C413):DG(D422) chainA ( 86) ILE86 0 0 0 0 0 0 6 3 3 0 0 ( 87) SER87 0 0 0 0 0 8 6 0 0 0 0 (228) ARG228 0 0 0 0 0 0 0 2 0 0 0 (237) GLN237 0 0 0 0 0 23 29 0 0 0 0 (239) GLU239 0 0 0 0 1 3 0 0 0 0 0 (240) ARG240 0 0 0 0 0 0 13 14 0 0 0 (252) SER252 0 0 0 0 0 2 0 0 0 0 0 (254) TYR254 0 0 0 0 1 0 0 0 0 0 0 (260) ALA260 0 0 0 2 0 0 0 0 0 0 0 (296) SER296 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknaashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgERiystrgiaitlSaYgggifAktggylvngktrklhprecarvmgypdsykvhpstSqaykqfgnsvvinvlqyiaynigsslnfkpy >2i9t_AB:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF NF-KB P65-P50 HETERODIMER BOUND TO PRDII ELEMENT OF B- INTERFERON PROMOTER organism=MUS MUSCULUS DNA sequence DC(D718):DG(C717) DA(D719):DT(C716) DG(D720):DC(C715) DA(D721):DT(C714) DG(D722):DC(C713) DG(D723):DC(C712) DA(D724):DT(C711) DA(D725):DT(C710) DT(D726):DA(C709) DT(D727):DA(C708) DT(D728):DA(C707) DC(D729):DG(C706) DC(D730):DG(C705) DC(D731):DG(C704) DA(D732):DT(C703) DC(D733):DG(C702) DT(D734):DA(C701) chainA ( 17) ARG33 0 0 0 0 9 12 2 0 0 0 0 0 0 0 0 0 0 ( 19) ARG35 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 ( 20) TYR36 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 ( 22) CYS38 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 23) GLU39 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 ( 26) SER42 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG187 0 0 0 0 0 2 11 1 0 0 0 0 0 0 0 0 0 chainB ( 16) ARG354 0 0 0 0 0 0 0 0 0 0 1 10 8 0 0 0 0 ( 18) ARG356 0 0 0 0 0 0 0 0 0 0 0 2 13 2 0 0 0 ( 19) TYR357 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 ( 21) CYS359 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 22) GLU360 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 ( 25) SER363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 26) HIS364 0 0 0 0 0 0 0 0 0 0 0 0 5 12 3 0 0 (203) LYS541 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 prot.sequence hapyveiieqpkqrgmRfRYkCEgrSagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/gpylqileqpkqrgfRfRYvCEgpSHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >2i9t_B:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF NF-KB P65-P50 HETERODIMER BOUND TO PRDII ELEMENT OF B- INTERFERON PROMOTER organism=MUS MUSCULUS DNA sequence DA(C701):DT(D734) DG(C702):DC(D733) DT(C703):DA(D732) DG(C704):DC(D731) DG(C705):DC(D730) DG(C706):DC(D729) DA(C707):DT(D728) DA(C708):DT(D727) DA(C709):DT(D726) DT(C710):DA(D725) DT(C711):DA(D724) DC(C712):DG(D723) DC(C713):DG(D722) DT(C714):DA(D721) DC(C715):DG(D720) DT(C716):DA(D719) DG(C717):DC(D718) chainB ( 16) ARG354 0 0 0 0 8 10 1 0 0 0 0 0 0 0 0 0 0 ( 18) ARG356 0 0 0 2 13 2 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR357 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 ( 21) CYS359 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 22) GLU360 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 ( 25) SER363 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) HIS364 0 0 3 12 5 0 0 0 0 0 0 0 0 0 0 0 0 (203) LYS541 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 prot.sequence gpylqileqpkqrgfRfRYvCEgpSHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >2ia6_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=BYPASS OF MAJOR BENZOPYRENE-DG ADDUCT BY Y-FAMILY DNA POLYMERASE WITH UNIQUE STRUCTURAL GAP organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(E1801):DC(F1918) DG(E1802):DC(F1917) DG(E1803):DC(F1916) DG(E1804):DC(F1915) DG(E1805):DC(F1914) DA(E1806):DT(F1913) DA(E1807):DT(F1912) DG(E1808):DC(F1911) DG(E1809):DC(F1910) DA(E1810):DT(F1909) DT(E1811):DA(F1908) DT(E1812):DA(F1907) ATP(B501):DT(F1905) chainB ( 7) ASP7 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 9) ASP9 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 10) TYR10 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 11) PHE11 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 44) ALA44 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 45) THR45 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 48) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 51) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 12 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 0 5 (105) ASP105 0 0 0 0 0 0 0 0 0 0 0 0 2 (159) LYS159 0 0 0 0 0 0 0 0 0 0 0 0 7 (244) SER244 0 0 0 0 0 0 0 0 0 1 0 0 0 (336) ARG336 0 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2ibk_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=BYPASS OF MAJOR BENZOPYRENE-DG ADDUCT BY Y-FAMILY DNA POLYMERASE WITH UNIQUE STRUCTURAL GAP organism=Sulfolobus solfataricus DNA sequence DG(D1):DC(E118) DG(D2):DC(E117) DG(D3):DC(E116) DG(D4):DC(E115) DG(D5):DC(E114) DA(D6):DT(E113) DA(D7):DT(E112) DG(D8):DC(E111) DG(D9):DC(E110) DA(D10):DT(E109) DT(D11):DA(E108) DT(D12):DA(E107) DA(D13):DT(E105) DT(D14):DA(E104) chainA ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (244) SER244 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (285) HIS285 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (297) SER297 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (336) ARG336 0 0 0 0 0 0 0 0 0 3 7 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgAvatanyearkfgvkAgipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivSrgrtfphgisketaysesvkllqkileederkirrigvRfsKfi >2ibs_D:DNA_methylase_specificity_domain;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF THE ADENINE-SPECIFIC DNA METHYLTRANSFERASE M.TAQI COMPLEXED WITH THE COFACTOR ANALOG AETA AND A 10 BP DNA CONTAINING 2-AMINOPURINE AT THE TARGET POSITION organism=Thermus aquaticus DNA sequence DG(E1):DC(F20) DT(E2):DA(F19) DT(E3):DG(F17) DC(E4):DC(F16) DG(E5):DT(F15) DT(E7):DA(F14) DG(E8):DC(F13) DT(E9):DA(F12) DC(E10):DG(F11) chainD ( 96) LYS116 0 0 5 5 2 0 0 0 0 ( 97) TYR117 0 0 5 1 0 0 0 0 0 (119) LYS139 0 0 5 5 0 0 0 0 0 (180) LYS200 0 0 0 0 0 17 11 7 0 (248) PHE268 0 0 4 0 0 0 0 0 0 (251) ARG271 0 11 22 3 0 0 0 0 0 (252) SER272 0 0 2 0 0 0 0 0 0 (253) PRO273 0 0 1 0 0 0 0 0 0 (254) GLU274 0 1 0 0 0 0 0 0 0 (276) ARG296 0 0 0 0 0 0 2 0 0 (303) ARG323 0 1 0 0 0 0 0 0 0 (315) HIS335 0 0 0 4 0 0 0 0 0 (316) THR336 0 0 0 1 3 5 0 0 0 (333) ARG353 0 0 0 1 0 0 0 0 0 (334) GLU354 0 0 0 9 0 0 0 0 0 (373) PRO393 0 0 0 0 4 9 0 0 0 (374) HIS394 0 0 0 4 14 0 0 0 0 prot.sequence vetppevvdfmvslaeaprggrvlepacahgpflrafreahgtayrfvgveidpkaldlppwaegiladfllwepgeafdlilgnppygivgeasKYpihvfkavkdlykkafstwkgKynlygaflekavrllkpggvlvfvvpatwlvledfallreflaregktsvyylgevfpqkKvsavvirfqksgkglslwdtqesesgftpilwaeyphwegeiirfeteetrkleisgmplgdlfhirFaaRSPEfkkhpavrkepgpglvpvltgRnlkpgwvdyeknhsglwmpkerakelRdfyatphlvvaHTkgtrvvaawderaypwREefhllpkegvrldpsslvqwlnseamqkhvrtlyrdfvPHltlrmlerlpvrreygfht >2ibt_A:DNA_methylase_specificity_domain;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF THE ADENINE-SPECIFIC DNA METHYLTRANSFERASE M.TAQI COMPLEXED WITH THE COFACTOR ANALOG AETA AND A 10 BP DNA CONTAINING 2-AMINOPURINE AT THE TARGET POSITION AND AN ABASIC SITE ANALOG AT THE TARGET BASE PARTNER POSITION organism=Thermus aquaticus DNA sequence DG(C11):DC(B10) DA(C12):DT(B9) DC(C13):DG(B8) DA(C14):DT(B7) DC(C16):DG(B5) DG(C17):DC(B4) DA(C19):DT(B3) DC(C20):DT(B2) chainA ( 96) LYS116 0 0 0 0 6 8 0 0 ( 97) TYR117 0 0 0 0 0 6 0 0 (119) LYS139 0 0 0 0 0 7 5 0 (180) LYS200 0 7 10 13 0 0 0 0 (248) PHE268 0 0 0 0 0 0 4 0 (251) ARG271 0 0 0 0 3 10 12 10 (252) SER272 0 0 0 0 0 2 0 0 (253) PRO273 0 0 0 0 0 1 0 0 (254) GLU274 0 0 0 0 0 0 0 1 (276) ARG296 0 0 2 0 0 0 0 0 (303) ARG323 0 0 0 0 0 0 0 1 (315) HIS335 0 0 0 0 0 4 0 0 (316) THR336 0 0 0 5 1 0 0 0 (333) ARG353 0 0 0 0 1 0 0 0 (334) GLU354 0 0 0 0 8 0 0 0 (373) PRO393 0 0 0 10 2 0 0 0 (374) HIS394 0 0 0 0 13 3 0 0 prot.sequence vetppevvdfmvslaeaprggrvlepacahgpflrafreahgtayrfvgveidpkaldlppwaegiladfllwepgeafdlilgnppygivgeasKYpihvfkavkdlykkafstwkgKynlygaflekavrllkpggvlvfvvpatwlvledfallreflaregktsvyylgevfpqkKvsavvirfqksgkglslwdtqesesgftpilwaeyphwegeiirfeteetrkleisgmplgdlfhirFaaRSPEfkkhpavrkepgpglvpvltgRnlkpgwvdyeknhsglwmpkerakelRdfyatphlvvaHTkgtrvvaawderaypwREefhllpkegvrldpsslvqwlnseamqkhvrtlyrdfvPHltlrmlerlpvrreygfht >2ief_B:Putative_DNA-binding_domain; title=STRUCTURE OF THE COOPERATIVE EXCISIONASE (XIS)-DNA COMPLEX REVEALS A MICRONUCLEOPROTEIN FILAMENT organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DA(F36):DT(E34) DA(F37):DT(E33) DC(F38):DG(E32) DA(F39):DT(E31) DG(F40):DC(E30) DA(F41):DT(E29) DC(F42):DG(E28) DT(F43):DA(E27) DA(F44):DT(E26) DC(F45):DG(E25) DA(F46):DT(E24) DT(F47):DA(E23) DA(F48):DT(E22) DA(F49):DT(E21) DT(F50):DA(E20) DA(F51):DT(E19) DC(F52):DG(E18) DT(F53):DA(E17) DG(F54):DC(E16) DT(F55):DA(D15) DA(F56):DT(D14) DA(F57):DT(D13) DA(F58):DT(D12) DA(F59):DT(D11) DC(F60):DG(D10) DA(F61):DT(D9) DC(F62):DG(D8) DA(F63):DT(D7) DA(F64):DT(D6) DC(F65):DG(D5) DA(F66):DT(D4) DT(F67):DA(D3) DA(F68):DT(D2) chainB ( 19) GLU19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG39 0 0 0 0 0 0 0 0 0 0 4 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence myltlqewnarqrrprslETvRRwvResrifpppvkdgReylfhesavkvdlnr >2ih2_D:S-adenosyl-L-methionine-dependent_methyltransferases;DNA_methylase_specificity_domain; title=CRYSTAL STRUCTURE OF THE ADENINE-SPECIFIC DNA METHYLTRANSFERASE M.TAQI COMPLEXED WITH THE COFACTOR ANALOG AETA AND A 10 BP DNA CONTAINING 5-METHYLPYRIMIDIN-2(1H)-ONE AT THE TARGET BASE PARTNER POSITION organism=Thermus aquaticus DNA sequence DG(E1):DC(F20) DT(E2):DA(F19) DT(E3):6MA(F18) DC(E4):DG(F17) DG(E5):DC(F16) DA(E6):5PY(F15) DT(E7):DA(F14) DG(E8):DC(F13) DT(E9):DA(F12) DC(E10):DG(F11) chainD ( 1) VAL21 0 0 0 0 0 8 0 0 0 0 ( 85) ASN105 0 0 0 0 0 10 0 0 0 0 ( 88) TYR108 0 0 0 0 0 49 0 0 0 0 ( 96) LYS116 0 0 0 6 14 0 0 0 0 0 ( 97) TYR117 0 0 7 6 0 0 0 0 0 0 (119) LYS139 0 0 7 7 0 0 0 0 0 0 (176) PHE196 0 0 0 0 0 13 0 0 0 0 (179) LYS199 0 0 0 0 0 7 0 0 0 0 (180) LYS200 0 0 0 0 0 0 21 12 4 0 (181) VAL201 0 0 0 0 0 1 0 0 0 0 (248) PHE268 0 0 4 0 0 0 0 0 0 0 (251) ARG271 0 11 15 9 6 0 0 0 0 0 (252) SER272 0 0 0 4 0 0 0 0 0 0 (253) PRO273 0 0 2 1 0 0 0 0 0 0 (254) GLU274 0 1 0 0 0 0 0 0 0 0 (276) ARG296 0 0 0 0 0 0 0 2 0 0 (303) ARG323 0 1 0 0 0 0 0 0 0 0 (315) HIS335 0 0 0 5 0 0 0 0 0 0 (316) THR336 0 0 0 0 2 3 4 0 0 0 (333) ARG353 0 0 0 0 2 0 0 0 0 0 (334) GLU354 0 0 0 0 16 0 0 0 0 0 (373) PRO393 0 0 0 0 6 2 10 0 0 0 (374) HIS394 0 0 0 4 22 2 0 0 0 0 prot.sequence VetppevvdfmvslaeaprggrvlepacahgpflrafreahgtayrfvgveidpkaldlppwaegiladfllwepgeafdlilgNppYgivgeasKYpihvfkavkdlykkafstwkgKynlygaflekavrllkpggvlvfvvpatwlvledfallreflaregktsvyylgevFpqKKVsavvirfqksgkglslwdtqesesgftpilwaeyphwegeiirfeteetrkleisgmplgdlfhirFaaRSPEfkkhpavrkepgpglvpvltgRnlkpgwvdyeknhsglwmpkerakelRdfyatphlvvaHTkgtrvvaawderaypwREefhllpkegvrldpsslvqwlnseamqkhvrtlyrdfvPHltlrmlerlpvrreygfht >2ih4_D:DNA_methylase_specificity_domain;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF THE ADENINE-SPECIFIC DNA METHYLTRANSFERASE M.TAQI COMPLEXED WITH THE COFACTOR ANALOG AETA AND A 10 BP DNA CONTAINING PYRROLO-DC AT THE TARGET BASE PARTNER POSITION organism=Thermus aquaticus DNA sequence DG(E5):DC(F20) DA(E6):DA(F19) DT(E7):DG(F17) DG(E8):DC(F16) DT(E9):DA(F14) DC(E10):DC(F13) chainD ( 1) VAL21 0 7 0 0 0 0 ( 85) ASN105 0 11 0 0 0 0 ( 88) TYR108 0 51 0 0 0 0 ( 96) LYS116 2 0 9 5 0 0 ( 97) TYR117 0 0 5 0 0 0 (119) LYS139 0 0 1 0 0 0 (176) PHE196 0 9 0 0 0 0 (179) LYS199 0 8 0 0 0 0 (180) LYS200 0 0 9 11 5 0 (181) VAL201 0 1 0 0 0 0 (251) ARG271 0 0 10 3 0 0 (252) SER272 0 0 2 0 0 0 (253) PRO273 0 0 1 0 0 0 (276) ARG296 0 0 0 1 0 1 (315) HIS335 0 0 0 1 0 0 (316) THR336 0 0 0 1 5 0 (333) ARG353 0 0 0 1 0 0 (334) GLU354 0 0 0 8 0 0 (373) PRO393 0 0 2 0 2 0 (374) HIS394 11 0 0 0 0 0 prot.sequence VetppevvdfmvslaeaprggrvlepacahgpflrafreahgtayrfvgveidpkaldlppwaegiladfllwepgeafdlilgNppYgivgeasKYpihvfkavkdlykkafstwkgKynlygaflekavrllkpggvlvfvvpatwlvledfallreflaregktsvyylgevFpqKKVsavvirfqksgkglslwdtqesesgftpilwaeyphwegeiirfeteetrkleisgmplgdlfhirfaaRSPefkkhpavrkepgpglvpvltgRnlkpgwvdyeknhsglwmpkerakelrdfyatphlvvaHTkgtrvvaawderaypwREefhllpkegvrldpsslvqwlnseamqkhvrtlyrdfvPHltlrmlerlpvrreygfht >2ih5_A:DNA_methylase_specificity_domain;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF THE ADENINE-SPECIFIC DNA METHYLTRANSFERASE M.TAQI COMPLEXED WITH THE COFACTOR ANALOG AETA AND A 10 BP DNA CONTAINING AN ABASIC SITE ANALOG AT THE TARGET BASE PARTNER POSITION organism=Thermus aquaticus DNA sequence DG(B1):DC(C20) DT(B2):DA(C19) DT(B3):6MA(C18) DC(B4):DG(C17) DG(B5):DC(C16) DA(B6):3DR(C15) DT(B7):DA(C14) DG(B8):DC(C13) DT(B9):DA(C12) DC(B10):DG(C11) chainA ( 1) VAL21 0 0 0 0 0 13 0 0 0 0 ( 85) ASN105 0 0 0 0 0 10 0 0 0 0 ( 88) TYR108 0 0 0 0 0 49 0 0 0 0 ( 96) LYS116 0 0 0 9 12 0 0 0 0 0 ( 97) TYR117 0 0 7 6 0 0 0 0 0 0 (119) LYS139 0 0 7 7 0 0 0 0 0 0 (176) PHE196 0 0 0 0 0 12 0 0 0 0 (179) LYS199 0 0 0 0 0 11 0 0 0 0 (180) LYS200 0 0 0 0 0 0 0 13 10 1 (181) VAL201 0 0 0 0 0 1 0 0 0 0 (248) PHE268 0 0 4 0 0 0 0 0 0 0 (251) ARG271 0 8 15 12 6 0 0 0 0 0 (252) SER272 0 0 0 2 0 0 0 0 0 0 (253) PRO273 0 0 2 1 0 0 0 0 0 0 (254) GLU274 0 1 0 0 0 0 0 0 0 0 (303) ARG323 0 1 0 0 0 0 0 0 0 0 (315) HIS335 0 0 0 4 0 0 0 0 0 0 (316) THR336 0 0 0 0 2 0 5 0 0 0 (333) ARG353 0 0 0 0 2 0 0 0 0 0 (334) GLU354 0 0 0 0 14 0 0 0 0 0 (373) PRO393 0 0 0 0 4 0 5 0 0 0 (374) HIS394 0 0 0 3 26 0 0 0 0 0 prot.sequence VetppevvdfmvslaeaprggrvlepacahgpflrafreahgtayrfvgveidpkaldlppwaegiladfllwepgeafdlilgNppYgivgeasKYpihvfkavkdlykkafstwkgKynlygaflekavrllkpggvlvfvvpatwlvledfallreflaregktsvyylgevFpqKKVsavvirfqksgkglslwdtqesesgftpilwaeyphwegeiirfeteetrkleisgmplgdlfhirFaaRSPEfkkhpavrkepgpglvpvltgrnlkpgwvdyeknhsglwmpkerakelRdfyatphlvvaHTkgtrvvaawderaypwREefhllpkegvrldpsslvqwlnseamqkhvrtlyrdfvPHltlrmlerlpvrreyg >2ihn_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CO-CRYSTAL OF BACTERIOPHAGE T4 RNASE H WITH A FORK DNA SUBSTRATE organism=Enterobacteria phage T4 DNA sequence DG(D1):DC(C18) DG(D2):DC(C17) DT(D3):DA(C16) DC(D4):DG(C15) DT(D5):DA(C14) DG(D6):DC(C13) DC(D7):DG(C12) DC(D8):DG(C11) DT(D9):DA(C10) DC(D10):DG(C9) DA(D11):DT(C8) DA(D12):DT(C7) chainA ( 26) SER26 0 0 0 0 0 0 0 0 0 0 0 4 ( 29) LEU29 0 0 0 0 0 0 0 0 0 0 0 5 ( 30) VAL30 0 0 0 0 0 0 0 0 0 0 0 11 (167) MET173 0 0 0 0 0 0 0 0 0 0 0 8 (168) HIS174 0 0 0 0 0 0 0 0 0 0 6 1 (214) ARG220 0 0 0 3 6 0 0 0 0 0 0 0 prot.sequence mdlemmldedykegiclidfsqialStaLVnfpdkekinlsmvrhlilnsikfnvkkaktlgytkivlcidnaksgywrrdfayyykknrstwdwegyfesshkvidelkaympyivmdidkyeandhiavlvkkfsleghkiliissdgdftqlhkypnvkqwspMHkkwvkiksgsaeidcmtkilkgdkkdnvasvkvrsdfwftrvegeRtpsmktsiveaiandreqakvllteseynrykenlvlidfdyipdniasnivnyynsyklpprgkiysyfvkaglskltnsinef >2iie_A:IHF-like_DNA-binding_proteins; title=SINGLE CHAIN INTEGRATION HOST FACTOR PROTEIN (SCIHF2) IN COMPLEX WITH DNA organism=ESCHERICHIA COLI DNA sequence DG(C-49):DC(E49) DG(C-48):DC(E48) DT(C-47):DA(E47) DG(C-46):DC(E46) DC(C-45):DG(E45) DA(C-44):DT(E44) DA(C-43):DT(E43) DC(C-42):DG(E42) DA(C-41):DT(E41) DA(C-40):DT(E40) DA(C-39):DT(E39) DT(C-38):DA(E38) DT(C-37):DA(E37) DG(C-36):DC(E36) DA(C-35):DT(E35) DT(C-34):DA(E34) DA(C-33):DT(E33) DA(C-32):DT(E32) DG(C-31):DC(E31) DC(C-30):DG(E30) DA(C-29):DT(D29) DA(C-28):DT(D28) DT(C-27):DA(D27) DG(C-26):DC(D26) DC(C-25):DG(D25) DT(C-24):DA(D24) DT(C-23):DA(D23) DT(C-22):DA(D22) DT(C-21):DA(D21) DT(C-20):DA(D20) DT(C-19):DA(D19) DG(C-18):DC(D18) DG(C-17):DC(D17) DC(C-16):DG(D16) chainA (104) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG107 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) ASN108 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) PRO109 0 0 0 0 0 0 0 0 0 0 0 18 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) LYS110 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ILE117 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) ARG147 0 0 0 0 8 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) ARG160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ARG163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ASN164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (165) PRO165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 13 0 0 0 0 0 0 0 0 0 0 0 0 (166) LYS166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mastkselierlatqqshipaktvedavkemlehmastlaqggsggltkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenagggerieiRgfgsfslhyrapRtgRNPKtgdkvelegkyvphfkpgkelrdraniyggsghhhhhh >2iif_A:IHF-like_DNA-binding_proteins; title=SINGLE CHAIN INTEGRATION HOST FACTOR MUTANT PROTEIN (SCIHF2-K45AE) IN COMPLEX WITH DNA organism=ESCHERICHIA COLI DNA sequence DG(C-49):DC(E49) DG(C-48):DC(E48) DT(C-47):DA(E47) DG(C-46):DC(E46) DC(C-45):DG(E45) DA(C-44):DT(E44) DA(C-43):DT(E43) DC(C-42):DG(E42) DA(C-41):DT(E41) DA(C-40):DT(E40) DA(C-39):DT(E39) DT(C-38):DA(E38) DT(C-37):DA(E37) DG(C-36):DC(E36) DA(C-35):DT(E35) DT(C-34):DA(E34) DA(C-33):DT(E33) DA(C-32):DT(E32) DG(C-31):DC(E31) DC(C-30):DG(E30) DA(C-29):DT(D29) DA(C-28):DT(D28) DT(C-27):DA(D27) DG(C-26):DC(D26) DC(C-25):DG(D25) DT(C-24):DA(D24) DT(C-23):DA(D23) DT(C-22):DA(D22) DT(C-21):DA(D21) DT(C-20):DA(D20) DT(C-19):DA(D19) DG(C-18):DC(D18) DG(C-17):DC(D17) DC(C-16):DG(D16) chainA (104) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG107 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) ASN108 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) PRO109 0 0 0 0 0 0 0 0 0 0 0 18 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) LYS110 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ILE117 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) ARG147 0 0 0 0 6 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) ARG160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ARG163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ASN164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (165) PRO165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 17 0 0 0 0 0 0 0 0 0 0 0 0 (166) LYS166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mastkselierlatqqshipaktvedavkemlehmastlaqggsggltkaemseylfdklglskrdakelvelffeeirralengeqvelsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenagggerieiRgfgsfslhyrapRtgRNPKtgdkvelegkyvphfkpgkelrdraniyggsghhhhhh >2imw_P:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MECHANISM OF TEMPLATE-INDEPENDENT NUCLEOTIDE INCORPORATION CATALYZED BY A TEMPLATE-DEPENDENT DNA POLYMERASE organism=Sulfolobus solfataricus DNA sequence DG(T1906):DC(S1813) DA(T1907):DT(S1812) DA(T1908):DT(S1811) DT(T1909):DA(S1810) DC(T1910):DG(S1809) DC(T1911):DG(S1808) DT(T1912):DA(S1807) DT(T1913):DA(S1806) DC(T1914):DG(S1805) DC(T1915):DG(S1804) DC(T1916):DG(S1803) DC(T1917):DG(S1802) DC(T1918):DG(S1801) chainP (297) SER297 0 0 0 0 0 0 0 1 0 0 0 0 0 (336) ARG336 0 0 0 0 0 0 0 0 0 0 2 0 0 (348) LYS348 0 0 0 0 0 0 0 0 5 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeaKakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivSrgrtfphgisketaysesvkllqkileederkirrigvRfskfieaigldK >2irf_GH:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX. organism=Mus musculus DNA sequence DT(F1125):DA(A1012) DC(F1126):DG(A1011) DA(F1127):5IU(A1010) DC(F1128):DG(A1009) DT(F1129):DA(A1008) DT(F1130):DA(A1007) DT(F1131):DA(A1006) DC(F1132):DG(A1005) DA(F1133):DT(A1004) DC(F1134):DG(A1003) 5IU(F1135):DA(A1002) DT(F1136):DA(A1001) chainG ( 76) ASN80 0 0 0 0 0 0 0 0 0 0 0 4 ( 79) CYS83 0 0 0 0 0 0 0 0 0 0 1 5 ( 83) SER87 0 0 0 0 0 0 0 0 0 4 2 0 chainH ( 71) LYS275 0 0 0 0 0 0 0 0 0 7 7 0 ( 75) ALA279 0 0 0 0 0 0 0 0 1 0 0 0 ( 76) ASN280 0 0 0 0 0 3 0 0 0 0 0 0 ( 78) ARG282 0 0 0 0 0 0 0 3 8 0 0 0 ( 79) CYS283 0 0 0 0 1 6 2 1 0 0 0 0 ( 83) SER287 0 0 0 4 2 0 0 0 0 0 0 0 prot.sequence rmrmrpwleeqinsntipglkwlnkekkifqipwmhaarhgwdvekdaplfrnwaihtgkhqpgidkpdpktwkaNfrCamnSlpdieevkdrsikkgnnafrvyrmlp/rmrmrpwleeqinsntipglkwlnkekkifqipwmHaarhgwdvekdaplfrnwaihtgkhqpgidkpdpKtwkANfRCamNSlpdieevkdrsikkgnnafrvyrmlp >2irf_IJKL:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX. organism=Mus musculus DNA sequence DT(D1101):DA(C1036) DC(D1102):DG(C1035) DA(D1103):5IU(C1034) DC(D1104):DG(C1033) DT(D1105):DA(C1032) DT(D1106):DA(C1031) DT(D1107):DA(C1030) DC(D1108):DG(C1029) DA(D1109):DT(C1028) DC(D1110):DG(C1027) 5IU(D1111):DA(C1026) DT(D1112):DA(C1025) DT(E1113):DA(B1024) DC(E1114):DG(B1023) DA(E1115):5IU(B1022) DC(E1116):DG(B1021) DT(E1117):DA(B1020) DT(E1118):DA(B1019) DT(E1119):DA(B1018) DC(E1120):DG(B1017) DA(E1121):DT(B1016) DC(E1122):DG(B1015) 5IU(E1123):DA(B1014) DT(E1124):DA(B1013) DT(F1125):DA(A1012) DC(F1126):DG(A1011) DA(F1127):5IU(A1010) DC(F1128):DG(A1009) DT(F1129):DA(A1008) DT(F1130):DA(A1007) DT(F1131):DA(A1006) DC(F1132):DG(A1005) DA(F1133):DT(A1004) DC(F1134):DG(A1003) 5IU(F1135):DA(A1002) DT(F1136):DA(A1001) chainI ( 36) HIS440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 ( 75) ALA479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 76) ASN480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 ( 79) CYS483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 1 0 0 0 0 0 0 0 0 0 0 ( 83) SER487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 75) ALA679 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASN680 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) CYS683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ALA684 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ASN686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) SER687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 36) HIS840 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ALA879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASN880 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG882 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) CYS883 0 0 0 0 0 0 0 0 0 0 1 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ASN886 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) SER887 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 71) LYS2075 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ALA2079 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASN2080 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG2082 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) CYS2083 0 0 0 0 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) SER2087 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rmrmrpwleeqinsntipglkwlnkekkifqipwmHaarhgwdvekdaplfrnwaihtgkhqpgidkpdpktwkaNfRCamNSlpdieevkdrsikkgnnafrvyrmlp/rmrmrpwleeqinsntipglkwlnkekkifqipwmHaarhgwdvekdaplfrnwaihtgkhqpgidkpdpktwkANfRCAmNSlpdieevkdrsikkgnnafrvyrmlp/rmrmrpwleeqinsntipglkwlnkekkifqipwmHaarhgwdvekdaplfrnwaihtgkhqpgidkpdpktwkaNfRCamNSlpdieevkdrsikkgnnafrvyrmlp/rmrmrpwleeqinsntipglkwlnkekkifqipwmHaarhgwdvekdaplfrnwaihtgkhqpgidkpdpKtwkANfRCamNSlpdieevkdrsikkgnnafrvyrmlp >2irf_L:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX. organism=Mus musculus DNA sequence DT(D1101):DA(C1036) DC(D1102):DG(C1035) DA(D1103):5IU(C1034) DC(D1104):DG(C1033) DT(D1105):DA(C1032) DT(D1106):DA(C1031) DT(D1107):DA(C1030) DC(D1108):DG(C1029) DA(D1109):DT(C1028) DC(D1110):DG(C1027) 5IU(D1111):DA(C1026) DT(D1112):DA(C1025) DT(E1113):DA(B1024) DC(E1114):DG(B1023) DA(E1115):5IU(B1022) DC(E1116):DG(B1021) DT(E1117):DA(B1020) DT(E1118):DA(B1019) DT(E1119):DA(B1018) DC(E1120):DG(B1017) DA(E1121):DT(B1016) DC(E1122):DG(B1015) 5IU(E1123):DA(B1014) DT(E1124):DA(B1013) DT(F1125):DA(A1012) DC(F1126):DG(A1011) DA(F1127):5IU(A1010) DC(F1128):DG(A1009) DT(F1129):DA(A1008) DT(F1130):DA(A1007) DT(F1131):DA(A1006) DC(F1132):DG(A1005) DA(F1133):DT(A1004) DC(F1134):DG(A1003) 5IU(F1135):DA(A1002) DT(F1136):DA(A1001) chainL ( 71) LYS2075 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ALA2079 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASN2080 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG2082 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) CYS2083 0 0 0 0 1 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) SER2087 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rmrmrpwleeqinsntipglkwlnkekkifqipwmHaarhgwdvekdaplfrnwaihtgkhqpgidkpdpKtwkANfRCamNSlpdieevkdrsikkgnnafrvyrmlp >2is1_AB:?;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF UVRD-DNA-SO4 COMPLEX organism=Escherichia coli DNA sequence DC(F1):DG(E10) DG(F2):DC(E9) DA(F3):DT(E8) DG(F4):DC(E7) DC(F5):DG(E6) DA(F6):DT(E5) DC(F7):DG(E4) DT(F8):DA(E3) DG(F9):DC(E2) DC(F10):DG(E1) DG(C1):DC(D10) DC(C2):DG(D9) DA(C3):DT(D8) DG(C4):DC(D7) DT(C5):DA(D6) DG(C6):DC(D5) DC(C7):DG(D4) DT(C8):DA(D3) DC(C9):DG(D2) DG(C10):DC(D1) chainA (419) ASP420 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (420) ARG421 0 0 0 0 0 0 0 13 8 2 0 0 0 0 0 0 0 0 0 0 (617) TYR621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 chainB (601) TYR621 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dvsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhiqsygnpveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigDRtldvvrqtsrdrqltlwqacrellqekalagraasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfsynedlmplqaflshaaleagegqadtwqdavqlmtlhsakglefpqvfivgmeegmfpsqmsldeggrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveevrlratvsrp/vsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhiqsveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigdrtldvvrqtsrdrqltlwqacrellqekalagraasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfsydedlmplqaflshaaleagegqdavqlmtlhsakglefpqvfivgmeegmfpsqmrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveev >2is1_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF UVRD-DNA-SO4 COMPLEX organism=Escherichia coli DNA sequence DC(D1):DG(C10) DG(D2):DC(C9) DA(D3):DT(C8) DG(D4):DC(C7) DC(D5):DG(C6) DA(D6):DT(C5) DC(D7):DG(C4) DT(D8):DA(C3) DG(D9):DC(C2) DC(D10):DG(C1) DG(E1):DC(F10) DC(E2):DG(F9) DA(E3):DT(F8) DG(E4):DC(F7) DT(E5):DA(F6) DG(E6):DC(F5) DC(E7):DG(F4) DT(E8):DA(F3) DC(E9):DG(F2) DG(E10):DC(F1) chainB (601) TYR621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 prot.sequence vsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhiqsveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigdrtldvvrqtsrdrqltlwqacrellqekalagraasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfsydedlmplqaflshaaleagegqdavqlmtlhsakglefpqvfivgmeegmfpsqmrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveev >2is2_AB:?;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF UVRD-DNA BINARY COMPLEX organism=Escherichia coli DNA sequence DC(C1):DG(D28) DG(C2):DC(D27) DA(C3):DT(D26) DG(C4):DC(D25) DC(C5):DG(D24) DA(C6):DT(D23) DC(C7):DG(D22) DT(C8):DA(D21) DG(C9):DC(D20) DC(C10):DG(D19) DA(C11):DT(D18) DC(C12):DG(D17) DT(C13):DA(D16) DC(C14):DG(D15) DG(C15):DC(D14) DA(C16):DT(D13) DG(C17):DC(D12) DT(C18):DA(D11) DG(C19):DC(D10) DC(C20):DG(D9) DA(C21):DT(D8) DG(C22):DC(D7) DT(C23):DA(D6) DG(C24):DC(D5) DC(C25):DG(D4) DT(C26):DA(D3) DC(C27):DG(D2) DG(C28):DC(D1) chainA (420) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 (452) ARG453 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (617) TYR621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 chainB (420) ARG421 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) ARG453 0 0 0 0 0 0 0 0 0 0 0 0 1 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (617) TYR621 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dvsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhiqsygnpveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigdRtldvvrqtsrdrqltlwqacrellqekalagRaasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfsydedlmplqaflshaaleagegqadtwqdavqlmtlhsakglefpqvfivgmeegmfpsqmsldeggrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveevrl/dvsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhiqsygnpveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigdRtldvvrqtsrdrqltlwqacrellqekalagRaasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfsydedlmplqaflshaaleagegqadtwqdavqlmtlhsakglefpqvfivgmeegmfpsqmsldeggrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveevrl >2is2_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF UVRD-DNA BINARY COMPLEX organism=Escherichia coli DNA sequence DC(D1):DG(C28) DG(D2):DC(C27) DA(D3):DT(C26) DG(D4):DC(C25) DC(D5):DG(C24) DA(D6):DT(C23) DC(D7):DG(C22) DT(D8):DA(C21) DG(D9):DC(C20) DC(D10):DG(C19) DA(D11):DT(C18) DC(D12):DG(C17) DT(D13):DA(C16) DC(D14):DG(C15) DG(D15):DC(C14) DA(D16):DT(C13) DG(D17):DC(C12) DT(D18):DA(C11) DG(D19):DC(C10) DC(D20):DG(C9) DA(D21):DT(C8) DG(D22):DC(C7) DT(D23):DA(C6) DG(D24):DC(C5) DC(D25):DG(C4) DT(D26):DA(C3) DC(D27):DG(C2) DG(D28):DC(C1) chainB (420) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 (452) ARG453 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 1 0 0 0 0 0 0 0 0 0 0 0 0 (617) TYR621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 prot.sequence dvsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhiqsygnpveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigdRtldvvrqtsrdrqltlwqacrellqekalagRaasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfsydedlmplqaflshaaleagegqadtwqdavqlmtlhsakglefpqvfivgmeegmfpsqmsldeggrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveevrl >2is4_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF UVRD-DNA-ADPNP TERNARY COMPLEX organism=Escherichia coli DNA sequence DC(D2):DG(C19) DG(D3):DC(C18) DA(D4):DT(C17) DG(D5):DC(C16) DC(D6):DG(C15) DA(D7):DT(C14) DC(D8):DG(C13) DT(D9):DA(C12) DG(D10):DC(C11) DC(D11):DG(C10) DA(D12):DT(C9) DG(D13):DC(C8) DT(D14):DA(C7) DG(D15):DC(C6) DC(D16):DG(C5) DT(D17):DA(C4) DC(D18):DG(C3) DG(D19):DC(C2) DT(D20):DT(C1) chainA (605) TYR621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 prot.sequence mdvsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhiqnpveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigdrtldvvrqtsrdrqltlwqacrellqekalagraasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfmplqaflshaaleagetwqdavqlmtlhsakglefpqvfivgmeegmfpsqmsldeggrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveevrlratvsrpvshqrmgtp >2is4_AB:?;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF UVRD-DNA-ADPNP TERNARY COMPLEX organism=Escherichia coli DNA sequence DT(C1):DT(D20) DC(C2):DG(D19) DG(C3):DC(D18) DA(C4):DT(D17) DG(C5):DC(D16) DC(C6):DG(D15) DA(C7):DT(D14) DC(C8):DG(D13) DT(C9):DA(D12) DG(C10):DC(D11) DC(C11):DG(D10) DA(C12):DT(D9) DG(C13):DC(D8) DT(C14):DA(D7) DG(C15):DC(D6) DC(C16):DG(D5) DT(C17):DA(D4) DC(C18):DG(D3) DG(C19):DC(D2) chainA (605) TYR621 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (599) TYR621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 prot.sequence mdvsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhiqnpveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigdrtldvvrqtsrdrqltlwqacrellqekalagraasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfmplqaflshaaleagetwqdavqlmtlhsakglefpqvfivgmeegmfpsqmsldeggrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveevrlratvsrpvshqrmgtp/mdvsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhignpveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigdrtldvvrqtsrdrqltlwqacrellqekalagraasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgqtrienleelvtatrqfslmplqaflshadtwqdavqlmtlhsakglefpqvfivgmeegmfpsqmsldeggrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveevrlrvsrpvqr >2is6_AB:?;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF UVRD-DNA-ADPMGF3 TERNARY COMPLEX organism=Escherichia coli DNA sequence DC(D1):DG(C18) DG(D2):DC(C17) DA(D3):DT(C16) DG(D4):DC(C15) DC(D5):DG(C14) DA(D6):DT(C13) DC(D7):DG(C12) DT(D8):DA(C11) DG(D9):DC(C10) DC(D10):DG(C9) DA(D11):DT(C8) DG(D12):DC(C7) DT(D13):DA(C6) DG(D14):DC(C5) DC(D15):DG(C4) DT(D16):DA(C3) DC(D17):DG(C2) DG(D18):DC(C1) chainA (619) TYR621 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (611) TYR621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 prot.sequence mdvsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhiqsygnpveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigdrtldvvrqtsrdrqltlwqacrellqekalagraasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfsyneedlmplqaflshaaleagegqadtwqdavqlmtlhsakglefpqvfivgmeegmfpsqmsldeggrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveevrlratvsrpvsh/dvsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhinpveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigdrtldvvrqtsrdrqltlwqacrellqekalagraasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfsedlmplqaflshaaleagegqadtwqdavqlmtlhsakglefpqvfivgmeegmfpsqmsldeggrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveevrlratvsrpvshqrmgtp >2is6_B:?;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF UVRD-DNA-ADPMGF3 TERNARY COMPLEX organism=Escherichia coli DNA sequence DC(D1):DG(C18) DG(D2):DC(C17) DA(D3):DT(C16) DG(D4):DC(C15) DC(D5):DG(C14) DA(D6):DT(C13) DC(D7):DG(C12) DT(D8):DA(C11) DG(D9):DC(C10) DC(D10):DG(C9) DA(D11):DT(C8) DG(D12):DC(C7) DT(D13):DA(C6) DG(D14):DC(C5) DC(D15):DG(C4) DT(D16):DA(C3) DC(D17):DG(C2) DG(D18):DC(C1) chainB (611) TYR621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 prot.sequence dvsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhinpveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigdrtldvvrqtsrdrqltlwqacrellqekalagraasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfsedlmplqaflshaaleagegqadtwqdavqlmtlhsakglefpqvfivgmeegmfpsqmsldeggrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveevrlratvsrpvshqrmgtp >2iso_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-DIFLUOROMETHYLENE TRIPHOSPHATE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 38 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >2isp_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-METHYLENE TRIPHOSPHATE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 40 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >2isz_ABCD:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A TWO-DOMAIN IDER-DNA COMPLEX CRYSTAL FORM I organism=Mycobacterium tuberculosis DNA sequence DC(F1):DG(E32) DA(F2):DT(E31) DC(F3):DG(E30) DT(F4):DA(E29) DA(F5):DT(E28) DA(F6):DT(E27) DA(F7):DT(E26) DA(F8):DT(E25) DT(F9):DA(E24) DT(F10):DA(E23) DA(F11):DT(E22) DG(F12):DC(E21) DG(F13):DC(E20) DG(F14):DC(E19) DC(F15):DG(E18) DA(F16):DT(E17) DG(F17):DC(E16) DC(F18):DG(E15) DC(F19):DG(E14) DT(F20):DA(E13) DG(F21):DC(E12) DT(F22):DA(E11) DG(F23):DC(E10) DC(F24):DG(E9) DT(F25):DA(E8) DA(F26):DT(E7) DA(F27):DT(E6) DC(F28):DG(E5) DA(F29):DT(E4) DG(F30):DC(E3) DG(F31):DC(E2) DG(F32):DC(E1) chainA ( 37) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 3 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 37) SER37 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 6 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER42 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 37) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG60 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 37) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 3 5 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 ( 42) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 prot.sequence mnelvdttemylrtiydleeegvtplrariaerldqSgPTvsQtvsRmerdgllrvagdRhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipglvelgv/mnelvdttemylrtiydleeegvtplrariaerldqSgPTvSQtvsRmerdgllrvagdRhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipglvelgv/mnelvdttemylrtiydleeegvtplrariaerldqSgPTvsqtvsRmerdgllrvagdRhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipglvelgv/mnelvdttemylrtiydleeegvtplrariaerldqSgPTvSqtvsRmerdgllrvagdrhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipglvelgv >2isz_B:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A TWO-DOMAIN IDER-DNA COMPLEX CRYSTAL FORM I organism=Mycobacterium tuberculosis DNA sequence DC(F1):DG(E32) DA(F2):DT(E31) DC(F3):DG(E30) DT(F4):DA(E29) DA(F5):DT(E28) DA(F6):DT(E27) DA(F7):DT(E26) DA(F8):DT(E25) DT(F9):DA(E24) DT(F10):DA(E23) DA(F11):DT(E22) DG(F12):DC(E21) DG(F13):DC(E20) DG(F14):DC(E19) DC(F15):DG(E18) DA(F16):DT(E17) DG(F17):DC(E16) DC(F18):DG(E15) DC(F19):DG(E14) DT(F20):DA(E13) DG(F21):DC(E12) DT(F22):DA(E11) DG(F23):DC(E10) DC(F24):DG(E9) DT(F25):DA(E8) DA(F26):DT(E7) DA(F27):DT(E6) DC(F28):DG(E5) DA(F29):DT(E4) DG(F30):DC(E3) DG(F31):DC(E2) DG(F32):DC(E1) chainB ( 37) SER37 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 6 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER42 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnelvdttemylrtiydleeegvtplrariaerldqSgPTvSQtvsRmerdgllrvagdRhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipglvelgv >2it0_ABCD:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A TWO-DOMAIN IDER-DNA COMPLEX CRYSTAL FORM II organism=Mycobacterium tuberculosis DNA sequence DC(E1):DG(F32) DC(E2):DG(F31) DC(E3):DG(F30) DT(E4):DA(F29) DG(E5):DC(F28) DT(E6):DA(F27) DT(E7):DA(F26) DA(E8):DT(F25) DG(E9):DC(F24) DC(E10):DG(F23) DA(E11):DT(F22) DC(E12):DG(F21) DA(E13):DT(F20) DG(E14):DC(F19) DG(E15):DC(F18) DC(E16):DG(F17) DT(E17):DA(F16) DG(E18):DC(F15) DC(E19):DG(F14) DC(E20):DG(F13) DC(E21):DG(F12) DT(E22):DA(F11) DA(E23):DT(F10) DA(E24):DT(F9) DT(E25):DA(F8) DT(E26):DA(F7) DT(E27):DA(F6) DT(E28):DA(F5) DA(E29):DT(F4) DG(E30):DC(F3) DT(E31):DA(F2) DG(E32):DC(F1) chainA ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG60 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 5 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainD ( 35) SER37 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 2 4 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence elvdttemylrtiydleeegvtplrariaerldqSgPTvsQtvsRmerdgllrvagdRhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipglvelgvasenlyf/elvdttemylrtiydleeegvtplrariaerldqSgPTvSQtvsRmerdgllrvagdrhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipglvelgvasenlyf/elvdttemylrtiydleeegvtplrariaerldqSgPTvsQtvsRmerdgllrvagdRhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipglvelg/elvdttemylrtiydleeegvtplrariaerldqSgPTvSqtvsRmerdgllrvagdrhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipglvelg >2it0_D:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A TWO-DOMAIN IDER-DNA COMPLEX CRYSTAL FORM II organism=Mycobacterium tuberculosis DNA sequence DC(E1):DG(F32) DC(E2):DG(F31) DC(E3):DG(F30) DT(E4):DA(F29) DG(E5):DC(F28) DT(E6):DA(F27) DT(E7):DA(F26) DA(E8):DT(F25) DG(E9):DC(F24) DC(E10):DG(F23) DA(E11):DT(F22) DC(E12):DG(F21) DA(E13):DT(F20) DG(E14):DC(F19) DG(E15):DC(F18) DC(E16):DG(F17) DT(E17):DA(F16) DG(E18):DC(F15) DC(E19):DG(F14) DC(E20):DG(F13) DC(E21):DG(F12) DT(E22):DA(F11) DA(E23):DT(F10) DA(E24):DT(F9) DT(E25):DA(F8) DT(E26):DA(F7) DT(E27):DA(F6) DT(E28):DA(F5) DA(E29):DT(F4) DG(E30):DC(F3) DT(E31):DA(F2) DG(E32):DC(F1) chainD ( 35) SER37 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 2 4 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence elvdttemylrtiydleeegvtplrariaerldqSgPTvSqtvsRmerdgllrvagdrhleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvlnnpttspfgnpipglvelg >2itl_AB:Origin_of_replication-binding_domain,_RBD-like; title=THE ORIGIN BINDING DOMAIN OF THE SV40 LARGE T ANTIGEN BOUND TO THE FUNCTIONAL PEN PALINDROME DNA (23 BP) organism=Simian virus 40 DNA sequence DA(W19) DG(W20) DA(W21) DG(W22) DG(W23) DC(W24) DC(W25) DG(W26) DA(W27) DG(W28) DG(W29) DC(W30) DG(W31) DG(W32) DC(W33) DC(W34) DT(W35) DC(W36) DG(W37) DG(W38) DC(W39) DC(W40) DT(W41) DC(W42) chainA ( 20) ASN153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 ( 21) ARG154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 ( 22) THR155 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 71) ARG204 0 0 0 0 0 0 0 0 0 0 0 0 17 17 0 0 0 0 0 0 0 0 0 0 chainB ( 18) SER152 0 4 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ASN153 0 0 0 15 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG154 2 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG204 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dpkdfpsellsflshavfsNRTlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphrhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpgglk/pkdfpsellsflshavfSNRtlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphrhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslp >2itl_B:Origin_of_replication-binding_domain,_RBD-like; title=THE ORIGIN BINDING DOMAIN OF THE SV40 LARGE T ANTIGEN BOUND TO THE FUNCTIONAL PEN PALINDROME DNA (23 BP) organism=Simian virus 40 DNA sequence DA(W19) DG(W20) DA(W21) DG(W22) DG(W23) DC(W24) DC(W25) DG(W26) DA(W27) DG(W28) DG(W29) DC(W30) DG(W31) DG(W32) DC(W33) DC(W34) DT(W35) DC(W36) DG(W37) DG(W38) DC(W39) DC(W40) DT(W41) DC(W42) chainB ( 18) SER152 0 4 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ASN153 0 0 0 15 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG154 2 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG204 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pkdfpsellsflshavfSNRtlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphrhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslp >2ivh_A:His-Me_finger_endonucleases; title=CRYSTAL STRUCTURE OF THE NUCLEASE DOMAIN OF COLE7 (H545Q MUTANT) IN COMPLEX WITH AN 18-BP DUPLEX DNA organism=ESCHERICHIA COLI DNA sequence DG(C19):DC(B18) DG(C20):DC(B17) DA(C21):DT(B16) DA(C22):DT(B15) DT(C23):DA(B14) DT(C24):DA(B13) DC(C25):DG(B12) DG(C26):DC(B11) DA(C27):DT(B10) DT(C28):DA(B9) DC(C29):DG(B8) DG(C30):DC(B7) DA(C31):DT(B6) DA(C32):DT(B5) DT(C33):DA(B4) DT(C34):DA(B3) DC(C35):DG(B2) DC(C36):DG(B1) chainA ( 45) ASP493 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG496 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG538 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 prot.sequence kpgkatgkgkpvnnkwlnnagkdlgspvpdrianklrdkefksfDdfRkkfweevskdpelskqfsrnnndrmkvgkapktrtqdvsgkRtsfelhqekpisvydmdnisvvtpkrhidihrgk >2ivk_BC:His-Me_finger_endonucleases; title=CRYSTAL STRUCTURE OF THE PERIPLASMIC ENDONUCLEASE VVN COMPLEXED WITH A 16-BP DNA organism=VIBRIO VULNIFICUS DNA sequence DA(F19):DT(E14) DT(F20):DA(E13) DT(F21):DA(E12) DC(F22):DG(E11) DG(F23):DC(E10) DA(F24):DT(E9) DT(F25):DA(E8) DC(F26):DG(E7) DG(F27):DC(E6) DA(F28):DT(E5) DA(F29):DT(E4) DT(F30):DA(E3) DT(F31):DA(E2) DC(F32):DG(E1) DG(J17):DC(I16) DA(J18):DT(I15) DA(J19):DT(I14) DT(J20):DA(I13) DT(J21):DA(I12) DC(J22):DG(I11) DG(J23):DC(I10) DA(J24):DT(I9) DT(J25):DA(I8) DC(J26):DG(I7) DG(J27):DC(I6) DA(J28):DT(I5) DA(J29):DT(I4) DT(J30):DA(I3) DT(J31):DA(I2) DC(J32):DG(I1) DG(G1):DC(H32) DA(G2):DT(H31) DA(G3):DT(H30) DT(G4):DA(H29) DT(G5):DA(H28) DC(G6):DG(H27) DG(G7):DC(H26) DA(G8):DT(H25) DT(G9):DA(H24) DC(G10):DG(H23) DG(G11):DC(H22) DA(G12):DT(H21) DA(G13):DT(H20) chainB ( 54) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LYS100 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) SER131 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 51) GLN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 ( 82) LYS100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) SER131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence appssfsaakqqavkiyqdhpisfycgcdiewqgkkgipnletcgyqvrkqqtRasRieweavvpawqfghhrqcwqkggrKncskndqqfrlmeadlhnltpaigevngdrSnfnfsqwngvdgvsygrcemqvnfkqrkvmppdrargsiartylymsqeygfqlskqqqqlmqawnksypvdewectrddriakiqgnhnpfvqqscqtq/appssfsaakqqavkiyqdhpisfycgcdiewqgkkgipnletcgyqvrkQqtRasrieweavvpawqfghhrqcwqkggrKncskndqqfrlmeadlhnltpaigevngdrSnfnfsqwngvdgvsygrcemqvnfkqrkvmppdrargsiartylymsqeygfqlskqqqqlmqawnksypvdewectrddriakiqgnhnpfvqqscqtq >2ivk_C:His-Me_finger_endonucleases; title=CRYSTAL STRUCTURE OF THE PERIPLASMIC ENDONUCLEASE VVN COMPLEXED WITH A 16-BP DNA organism=VIBRIO VULNIFICUS DNA sequence DT(H20):DA(G13) DT(H21):DA(G12) DC(H22):DG(G11) DG(H23):DC(G10) DA(H24):DT(G9) DT(H25):DA(G8) DC(H26):DG(G7) DG(H27):DC(G6) DA(H28):DT(G5) DA(H29):DT(G4) DT(H30):DA(G3) DT(H31):DA(G2) DC(H32):DG(G1) DG(I1):DC(J32) DA(I2):DT(J31) DA(I3):DT(J30) DT(I4):DA(J29) DT(I5):DA(J28) DC(I6):DG(J27) DG(I7):DC(J26) DA(I8):DT(J25) DT(I9):DA(J24) DC(I10):DG(J23) DG(I11):DC(J22) DA(I12):DT(J21) DA(I13):DT(J20) DT(I14):DA(J19) DT(I15):DA(J18) DC(I16):DG(J17) DG(E1):DC(F32) DA(E2):DT(F31) DA(E3):DT(F30) DT(E4):DA(F29) DT(E5):DA(F28) DC(E6):DG(F27) DG(E7):DC(F26) DA(E8):DT(F25) DT(E9):DA(F24) DC(E10):DG(F23) DG(E11):DC(F22) DA(E12):DT(F21) DA(E13):DT(F20) DT(E14):DA(F19) chainC ( 51) GLN69 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG72 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LYS100 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) SER131 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence appssfsaakqqavkiyqdhpisfycgcdiewqgkkgipnletcgyqvrkQqtRasrieweavvpawqfghhrqcwqkggrKncskndqqfrlmeadlhnltpaigevngdrSnfnfsqwngvdgvsygrcemqvnfkqrkvmppdrargsiartylymsqeygfqlskqqqqlmqawnksypvdewectrddriakiqgnhnpfvqqscqtq >2j6s_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF SULFOLOBUS SOLFATARICUS DPO4 DNA POLYMERASE, O6- METHYLGUANINE MODIFIED DNA, AND DATP. organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) DC(P14):DT(T4) chainA ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 5 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvrfskfi >2j6u_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF SULFOLOBUS SOLFATARICUS DPO4 DNA POLYMERASE, O6- METHYLGUANINE MODIFIED DNA, AND DGTP. organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) DT(P14):DC(T4) chainA ( 15) TYR15 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 35) VAL35 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 45) ALA45 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (107) ILE107 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (339) ARG339 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence hhhmivlfvdfdyfYaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasIdeayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2ja5_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX A organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(T18) DT(T19) DC(T20) DC(T21) DG(T23) DG(T24) DT(T25) DC(T26) DA(T27) DT(T28) chainA (344) ARG350 0 0 1 0 0 0 0 0 0 0 (442) PRO448 0 2 0 0 0 0 0 0 0 0 (825) THR831 10 0 0 0 0 0 0 0 0 0 (826) ALA832 3 0 0 0 0 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdrdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >2ja5_AB: title=CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX A organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(T18) DT(T19) DC(T20) DC(T21) DG(T23) DG(T24) DT(T25) DC(T26) DA(T27) DT(T28) chainA (344) ARG350 0 0 1 0 0 0 0 0 0 0 (442) PRO448 0 2 0 0 0 0 0 0 0 0 (825) THR831 10 0 0 0 0 0 0 0 0 0 (826) ALA832 3 0 0 0 0 0 0 0 0 0 chainB prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdrdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/fedesapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlaGpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpikprqlhnthwglvCpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpissKRdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >2ja6_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX B organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T10):DT(N7) DG(T11):DC(N6) DT(T12):DA(N5) DA(T13):DT(N4) DC(T14):DG(N3) DT(T15):DA(N2) DT(T16):DA(N1) DT(T19):DT(N0) chainA (825) THR831 0 0 0 0 0 0 0 3 (826) ALA832 0 0 0 0 0 0 0 2 (827) GLU833 0 0 0 0 0 0 0 2 (1086) LYS1102 0 0 0 0 0 0 1 0 (1352) ARG1386 0 0 0 0 0 0 2 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdrdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAEtgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlKeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >2ja6_AB: title=CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX B organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T10):DT(N7) DG(T11):DC(N6) DT(T12):DA(N5) DA(T13):DT(N4) DC(T14):DG(N3) DT(T15):DA(N2) DT(T16):DA(N1) DT(T19):DT(N0) chainA (825) THR831 0 0 0 0 0 0 0 3 (826) ALA832 0 0 0 0 0 0 0 2 (827) GLU833 0 0 0 0 0 0 0 2 (1086) LYS1102 0 0 0 0 0 0 1 0 (1352) ARG1386 0 0 0 0 0 0 2 0 chainB prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdrdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAEtgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlKeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/fedesapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpikprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpissKRDastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqiHipyaakllfqelmamnitprlytdrsrdf >2ja7_AB: title=CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX C organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(210):DT(17) DG(211):DC(16) DT(212):DA(15) DA(213):DT(14) DC(214):DG(13) DT(215):DA(12) DT(216):DA(11) chainA (1352) ARG1386 0 0 0 0 0 5 0 chainB prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdrdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/fedesapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpikprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >2ja7_M:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX C organism=? DNA sequence DA(41):DT(516) DA(42):DT(515) DG(43):DC(514) DT(44):DA(513) DA(45):DT(512) DC(46):DG(511) DT(47):DA(510) chainM (1352) ARG1386 0 4 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdrdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >2ja7_MN: title=CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX C organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(510):DT(47) DG(511):DC(46) DT(512):DA(45) DA(513):DT(44) DC(514):DG(43) DT(515):DA(42) DT(516):DA(41) chainM (1352) ARG1386 0 0 0 0 0 4 0 chainN prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdrdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/fedesapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpikprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >2ja8_AB: title=CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX D organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T10):DT(N7) DG(T11):DC(N6) DT(T12):DA(N5) DA(T13):DT(N4) DC(T14):DG(N3) DT(T15):DA(N2) DT(T16):DA(N1) DT(T17):DT(N0) chainA (823) VAL829 0 0 0 0 0 0 0 1 (827) GLU833 0 0 0 0 0 0 0 2 (830) TYR836 0 0 0 0 0 0 0 2 (1086) LYS1102 0 0 0 0 0 0 1 0 (1352) ARG1386 0 0 0 0 0 0 1 0 chainB prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdrdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtaVktaEtgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlKeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/fedesapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpikprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpiSskrDasTplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqiHipyaakllfqelmamnitprlytdrsrdf >2jef_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=THE MOLECULAR BASIS OF SELECTIVITY OF NUCLEOTIDE TRIPHOSPHATE INCORPORATION OPPOSITE O6-BENZYLGUANINE BY SULFOLOBUS SOLFATARICUS DNA POLYMERASE IV: STEADY-STATE AND PRE-STEADY-STATE AND X-RAY CRYSTALLOGRAPHY OF CORRECT AND INCORRECT PAIRING organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) chainA (337) ARG336 0 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrKevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2jeg_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=THE MOLECULAR BASIS OF SELECTIVITY OF NUCLEOSIDE TRIPHOSPHATE INCORPORATION OPPOSITE O6-BENZYLGUANINE BY SULFOLOBUS SOLFATARICUS DNA POLYMERASE IV: STEADY-STATE AND PRE-STEADY-STATE KINETICS AND X- RAY CRYSTALLOGRAPHY OF CORRECT AND INCORRECT PAIRING organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(T6):DC(P13) DA(T7):DT(P12) DA(T8):DT(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA (337) ARG336 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2jei_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=THE MOLECULAR BASIS OF SELECTIVITY OF NUCLEOSIDE TRIPHOSPHATE INCORPORATION OPPOSITE O6-BENZYLGUANINE BY SULFOLOBUS SOLFATARICUS DNA POLYMERASE IV: STEADY-STATE AND PRE-STEADY-STATE KINETICS AND X- RAY CRYSTALLOGRAPHY OF CORRECT AND INCORRECT PAIRING organism=SULFOLOBUS SOLFATARICUS DNA sequence DC(T4):DT(P14) DG(T6):DC(P13) DA(T7):DT(P12) DA(T8):DT(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA ( 34) VAL32 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA42 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG336 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hhmivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2jej_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=THE MOLECULAR BASIS OF SELECTIVITY OF NUCLEOSIDE TRIPHOSPHATE INCORPORATION OPPOSITE O6-BENZYLGUANINE BY SULFOLOBUS SOLFATARICUS DNA POLYMERASE IV: STEADY-STATE AND PRE-STEADY-STATE KINETICS AND X- RAY CRYSTALLOGRAPHY OF CORRECT AND INCORRECT PAIRING organism=SULFOLOBUS SOLFATARICUS DNA sequence DA(T3):DG(P15) DC(T4):DC(P14) DG(T6):DC(P13) DA(T7):DT(P12) DA(T8):DT(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA ( 32) VAL32 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PHE37 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PRO60 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL62 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) GLU63 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG240 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrFedsgAvatanyearkfgvkagiPiVEakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtRvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2jg3_D:DNA_methylase_specificity_domain;S-adenosyl-L-methionine-dependent_methyltransferases; title=MTAQI WITH BAZ organism=THERMUS AQUATICUS DNA sequence DT(E2):DC(F20) DT(E3):DA(F19) DC(E4):DG(F17) DG(E5):DC(F16) DA(E6):DT(F15) DT(E7):DA(F14) DG(E8):DC(F13) DT(E9):DA(F12) DC(E10):DG(F11) chainD ( 83) ASN105 0 0 0 0 9 0 0 0 0 ( 86) TYR108 0 0 0 0 24 0 0 0 0 ( 94) LYS116 0 0 6 7 1 0 0 0 0 ( 95) TYR117 0 0 6 0 0 0 0 0 0 (117) LYS139 0 5 7 0 0 0 0 0 0 (174) PHE196 0 0 0 0 6 0 0 0 0 (177) LYS199 0 0 0 0 13 0 0 0 0 (178) LYS200 0 0 0 0 0 10 12 7 0 (246) PHE268 0 4 0 0 0 0 0 0 0 (249) ARG271 10 12 9 3 0 0 0 0 0 (250) SER272 0 0 3 0 0 0 0 0 0 (251) PRO273 0 0 1 0 0 0 0 0 0 (252) GLU274 2 0 0 0 0 0 0 0 0 (274) ARG296 0 0 0 0 0 0 2 0 0 (301) ARG323 1 0 0 0 0 0 0 0 0 (313) HIS335 0 0 5 0 0 0 0 0 0 (314) THR336 0 0 0 1 3 5 0 0 0 (331) ARG353 0 0 0 1 0 0 0 0 0 (332) GLU354 0 0 0 8 0 0 0 0 0 (371) PRO393 0 0 0 2 2 9 0 0 0 (372) HIS394 0 0 4 13 2 0 0 0 0 prot.sequence tppevvdfmvslaeaprggrvlepacahgpflrafreahgtayrfvgveidpkaldlppwaegiladfllwepgeafdlilgNppYgivgeasKYpihvfkavkdlykkafstwkgKynlygaflekavrllkpggvlvfvvpatwlvledfallreflaregktsvyylgevFpqKKvsavvirfqksgkglslwdtqesesgftpilwaeyphwegeiirfeteetrkleisgmplgdlfhirFaaRSPEfkkhpavrkepgpglvpvltgRnlkpgwvdyeknhsglwmpkerakelRdfyatphlvvaHTkgtrvvaawderaypwREefhllpkegvrldpsslvqwlnseamqkhvrtlyrdfvPHltlrmlerlpvrreygfht >2jlg_B:DNA/RNA_polymerases; title=STRUCTURAL EXPLANATION FOR THE ROLE OF MN IN THE ACTIVITY OF PHI6 RNA- DEPENDENT RNA POLYMERASE organism=PSEUDOMONAS PHAGE PHI6 DNA sequence DT(E3) DT(E4) DT(E5) DC(E6) DC(E7) chainB ( 26) GLN26 1 0 0 0 0 ( 30) ARG30 1 0 0 0 0 (144) LYS144 0 0 0 0 2 (202) VAL202 0 4 0 0 0 (204) ARG204 0 0 16 0 0 (272) ALA272 0 0 2 0 0 (288) GLN288 0 0 0 0 13 (291) ARG291 0 0 0 0 8 (393) SER393 0 0 6 0 0 (398) THR398 0 0 0 1 0 (530) TYR530 0 0 1 0 0 (543) LYS543 0 2 1 0 0 (628) LEU628 0 0 0 0 1 (629) GLN629 0 0 0 25 0 (633) THR633 0 0 0 0 10 (634) GLU634 0 0 0 0 8 (642) HIS642 0 0 0 0 7 prot.sequence prrapafplsdikaqmlfannikaqQaskRsfkegaietyegllsvdprflsfknelsryltdhfpanvdeygrvygngvrtnffgmrhmngfpmipatwplasnlkkradadladgpvserdnllfraavrlmfsdlepvplKirkgsstcipyfsndmgtkieiaeralekaeeagnlmlqgkfddayqlhqmggayyvVyRaqstdaitldpktgkfvskdrmvadfeyavtggeqgslfaaskdasrlkeqygidvpdgffcerrrtAmggpfalnapimavaQpvRnkiyskyaytfhhttrlnkeekvkewslcvatdvsdhdtfwpgwlrdlicdellnmgyapwwvklfetslklpvyvgapapeqghtllgdpsnpdlevglsSgqgaTdlmgtllmsitylvmqldhtaphlnsrikdmpsacrfldsywqgheeirqisksddamlgwtkgralvgghrlfemlkegkvnpspymkisyqhggaflgdillydsrrepgsaifvgninsmlnnqfspeYgvqsgvrdrskrKrpfpglawasmkdtygacpiysdvleaiercwwnafgesyrayredmlkrdtlelsryvasmarqaglaeltpidlevladpnkLQykwTEadvsaniHevlmhgvsvekterflrsvmpr >2jp9_A:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF THE WILMS TUMOR SUPPRESSOR PROTEIN ZINC FINGER DOMAIN BOUND TO DNA organism=HOMO SAPIENS DNA sequence DC(B124):DG(C157) DG(B125):DC(C156) DC(B126):DG(C155) DG(B127):DC(C154) DG(B128):DC(C153) DG(B129):DC(C152) DG(B130):DC(C151) DG(B131):DC(C150) DC(B132):DG(C149) DG(B133):DC(C148) DT(B134):DA(C147) DC(B135):DG(C146) DT(B136):DA(C145) DG(B137):DC(C144) DC(B138):DG(C143) DG(B139):DC(C142) DC(B140):DG(C141) chainA ( 25) GLN25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 29) ARG29 0 0 0 0 0 0 0 0 0 0 0 1 9 10 4 0 0 ( 32) THR32 0 0 0 0 0 0 0 0 0 0 4 0 6 3 0 0 0 ( 50) ARG50 0 0 0 0 0 0 0 0 10 16 18 0 0 0 0 0 0 ( 52) ASP52 0 0 0 0 0 0 0 0 1 4 18 0 0 0 0 0 0 ( 53) GLN53 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 ( 56) ARG56 0 0 0 0 0 0 1 10 7 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 0 0 21 14 1 0 0 0 0 0 0 0 0 0 ( 79) SER79 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 80) ASP80 0 0 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 ( 81) HIS81 0 0 0 0 19 10 0 0 0 0 0 0 0 0 0 0 0 (108) ARG108 0 0 13 14 5 0 0 0 0 0 0 0 0 0 0 0 0 (110) ASP110 0 0 0 1 9 3 0 0 0 0 0 0 0 0 0 0 0 (111) GLU111 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG114 1 6 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence asekrpfmcaypgcnkryfklshlQmhsRkhTgekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRSDHlkthtrthtgekpfscrwpscqkkfaRsDElvRhhnmh >2jpa_A:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF THE WILMS TUMOR SUPPRESSOR PROTEIN ZINC FINGER DOMAIN BOUND TO DNA organism=HOMO SAPIENS DNA sequence DC(B124):DG(C151) DG(B125):DC(C150) DC(B126):DG(C149) DG(B127):DC(C148) DG(B128):DC(C147) DG(B129):DC(C146) DG(B130):DC(C145) DG(B131):DC(C144) DC(B132):DG(C143) DG(B133):DC(C142) DT(B134):DA(C141) DC(B135):DG(C140) DT(B136):DA(C139) DG(B137):DC(C138) chainA ( 25) GLN25 0 0 0 0 0 0 0 0 0 0 0 0 1 10 ( 26) MET26 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 28) SER28 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 29) ARG29 0 0 0 0 0 0 0 0 0 0 4 2 0 0 ( 32) THR32 0 0 0 0 0 0 0 0 0 0 1 0 3 1 ( 50) ARG50 0 0 0 0 0 0 0 0 13 15 15 0 0 0 ( 52) ASP52 0 0 0 0 0 0 0 0 0 4 18 0 0 0 ( 53) GLN53 0 0 0 0 0 0 0 8 9 0 0 0 0 0 ( 56) ARG56 0 0 0 0 0 0 5 12 3 0 0 0 0 0 ( 78) ARG78 0 0 0 0 0 14 12 2 0 0 0 0 0 0 ( 79) SER79 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 80) ASP80 0 0 0 0 0 0 4 16 1 0 0 0 0 0 ( 81) HIS81 0 0 0 0 20 10 0 0 0 0 0 0 0 0 (108) ARG108 0 0 13 14 5 0 0 0 0 0 0 0 0 0 (109) SER109 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (110) ASP110 0 0 0 1 9 4 0 0 0 0 0 0 0 0 (111) GLU111 0 2 5 0 0 0 0 0 0 0 0 0 0 0 (114) ARG114 2 8 14 1 0 0 0 0 0 0 0 0 0 0 prot.sequence asekrpfmcaypgcnkryfklshlQMhsrkhtgekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRsDhlkthtrthtgekpfscrwpscqkkfaRsDelvRhhnmh >2jx1_A:CCHHC_domain; title=STRUCTURE OF THE FIFTH ZINC FINGER OF MYELIN TRANSCRIPTION FACTOR 1 IN COMPLEX WITH RARE DNA organism=MUS MUSCULUS DNA sequence DA(B1):DT(C26) DC(B2):DG(C25) DC(B3):DG(C24) DG(B4):DC(C23) DA(B5):DT(C22) DA(B6):DT(C21) DA(B7):DT(C20) DG(B8):DC(C19) DT(B9):DA(C18) DT(B10):DA(C17) DC(B11):DG(C16) DA(B12):DT(C15) DC(B13):DG(C14) chainA ( 14) HIS22 0 0 0 0 0 0 0 8 0 0 0 0 0 ( 18) ASN26 0 0 0 0 0 0 0 22 6 0 0 0 0 ( 19) TYR27 0 0 0 0 0 0 0 82 32 0 0 0 0 ( 24) SER32 0 0 0 0 0 0 4 12 0 0 0 0 0 ( 25) LEU33 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 26) SER34 0 0 0 0 0 0 19 42 0 0 0 0 0 prot.sequence dlkcptpgcdgsgHitgNYashrSLSgcpra >2jxi_AB:Ribbon-helix-helix; title=SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF PSEUDOMONAS PUTIDA PROLINE UTILIZATION A (PUTA) BOUND TO GTTGCA DNA SEQUENCE organism=PSEUDOMONAS PUTIDA DNA sequence DG(C1):DC(D28) DC(C2):DG(D27) DG(C3):DC(D26) DG(C4):DC(D25) DT(C5):DA(D24) DT(C6):DA(D23) DG(C7):DC(D22) DC(C8):DG(D21) DA(C9):DT(D20) DC(C10):DG(D19) DC(C11):DG(D18) DT(C12):DA(D17) DT(C13):DA(D16) DT(C14):DA(D15) chainA ( 5) THR5 0 0 0 0 1 5 0 0 0 0 0 0 0 0 ( 30) HIS30 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainB ( 5) THR50 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 30) HIS75 0 0 0 0 0 0 0 0 5 1 0 0 0 0 prot.sequence mattTlgvklddptrerlkaaaqsidrtpHwlikqaifnylekle/mattTlgvklddptrerlkaaaqsidrtpHwlikqaifnylekle >2jxi_B:Ribbon-helix-helix; title=SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF PSEUDOMONAS PUTIDA PROLINE UTILIZATION A (PUTA) BOUND TO GTTGCA DNA SEQUENCE organism=PSEUDOMONAS PUTIDA DNA sequence DG(C1):DC(D28) DC(C2):DG(D27) DG(C3):DC(D26) DG(C4):DC(D25) DT(C5):DA(D24) DT(C6):DA(D23) DG(C7):DC(D22) DC(C8):DG(D21) DA(C9):DT(D20) DC(C10):DG(D19) DC(C11):DG(D18) DT(C12):DA(D17) DT(C13):DA(D16) DT(C14):DA(D15) chainB ( 5) THR50 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 30) HIS75 0 0 0 0 0 0 0 0 5 1 0 0 0 0 prot.sequence mattTlgvklddptrerlkaaaqsidrtpHwlikqaifnylekle >2jzw_A:Retrovirus_zinc_finger-like_domains; title=HOW THE HIV-1 NUCLEOCAPSID PROTEIN BINDS AND DESTABILISES THE (- )PRIMER BINDING SITE DURING REVERSE TRANSCRIPTION organism=? DNA sequence DC(B103):DG(B113) DC(B104):DG(B112) DC(B105):DG(B111) chainA ( 2) VAL13 0 0 13 ( 13) THR24 0 0 12 ( 15) ARG26 0 1 15 ( 16) ASN27 0 0 33 prot.sequence nVkcfncgkeghTaRNcraprkkgcwkcgkeghqmkdcterqan >2k1n_ABCD:AbrB/MazE/MraZ-like; title=DNA BOUND STRUCTURE OF THE N-TERMINAL DOMAIN OF ABRB organism=BACILLUS SUBTILIS DNA sequence DA(E1):DT(F25) DT(E2):DA(F24) DG(E3):DC(F23) DA(E4):DT(F22) DT(E5):DA(F21) DT(E6):DA(F20) DG(E7):DC(F19) DA(E8):DT(F18) DC(E9):DG(F17) DA(E10):DT(F16) DA(E11):DT(F15) DT(E12):DA(F14) DT(E13):DA(F13) DA(E14):DT(F12) DT(E15):DA(F11) DT(E16):DA(F10) DG(E17):DC(F9) DG(E18):DC(F8) DA(E19):DT(F7) DA(E20):DT(F6) DA(E21):DT(F5) DC(E22):DG(F4) DC(E23):DG(F3) DT(E24):DA(F2) DT(E25):DA(F1) chainA ( 11) ASP11 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) LEU13 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG15 0 0 0 0 0 12 20 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL17 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 11) ASP11 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) LEU13 0 0 0 0 0 0 0 0 8 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG15 0 0 0 0 0 0 6 17 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG24 0 0 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 13) LEU13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 9 0 0 0 0 0 0 0 ( 15) ARG15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 4 0 0 0 0 0 0 0 ( 17) VAL17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 23) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainD ( 11) ASP11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 13) LEU13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 ( 15) ARG15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 16 4 0 0 0 0 0 prot.sequence mkstgivrkvDeLgRvVipielrrtlgiaekdaleiyvddekiilkkykpnmtcq/mkstgivrkvDeLgRvvipielrRtlgiaekdaleiyvddekiilkkykpnmtcq/mkstgivrkvdeLgRvVipielRrtlgiaekdaleiyvddekiilkkykpnmtcq/mkstgivrkvDeLgRvvipielrrtlgiaekdaleiyvddekiilkkykpnmtcq >2k1n_B:AbrB/MazE/MraZ-like; title=DNA BOUND STRUCTURE OF THE N-TERMINAL DOMAIN OF ABRB organism=BACILLUS SUBTILIS DNA sequence DA(F1):DT(E25) DA(F2):DT(E24) DG(F3):DC(E23) DG(F4):DC(E22) DT(F5):DA(E21) DT(F6):DA(E20) DT(F7):DA(E19) DC(F8):DG(E18) DC(F9):DG(E17) DA(F10):DT(E16) DA(F11):DT(E15) DT(F12):DA(E14) DA(F13):DT(E13) DA(F14):DT(E12) DT(F15):DA(E11) DT(F16):DA(E10) DG(F17):DC(E9) DT(F18):DA(E8) DC(F19):DG(E7) DA(F20):DT(E6) DA(F21):DT(E5) DT(F22):DA(E4) DC(F23):DG(E3) DA(F24):DT(E2) DT(F25):DA(E1) chainB ( 11) ASP11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 13) LEU13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 8 0 0 0 0 0 0 0 0 ( 15) ARG15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 17 6 0 0 0 0 0 0 ( 24) ARG24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 0 0 prot.sequence mkstgivrkvDeLgRvvipielrRtlgiaekdaleiyvddekiilkkykpnmtcq >2k7f_A:BRCT_domain; title=HADDOCK CALCULATED MODEL OF THE COMPLEX BETWEEN THE BRCT REGION OF RFC P140 AND DSDNA organism=HOMO SAPIENS DNA sequence DC(C19):DG(B10) DT(C20):DA(B9) DC(C21):DG(B8) DG(C22):DC(B7) DA(C23):DT(B6) DG(C24):DC(B5) DG(C25):DC(B4) DT(C26):DA(B3) DC(C27):DG(B2) DG(C28):DC(B1) chainA ( 11) TYR385 0 0 0 0 0 0 9 0 0 0 ( 41) THR415 0 1 0 0 0 0 0 0 0 0 ( 66) ASN440 5 0 0 0 0 0 0 0 0 0 ( 78) ARG452 0 0 0 0 4 0 0 0 0 0 ( 79) ASP453 0 3 2 0 0 0 0 0 0 0 ( 80) SER454 0 0 2 11 0 0 0 0 0 0 ( 82) GLN456 0 0 1 0 0 0 0 0 0 0 ( 83) SER457 2 6 0 0 0 0 0 0 0 0 ( 84) LYS458 12 8 0 0 0 0 0 0 0 0 prot.sequence krtnyqayrsYlnregpkalgskeipkgaencleglifviTgvlesierdeakslieryggkvtgNvskktnylvmgRDSgQSKsdkaaalgtkiidedgllnlirnle >2kae_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=DATA-DRIVEN MODEL OF MED1:DNA COMPLEX organism=CAENORHABDITIS ELEGANS DNA sequence DC(C21):DG(B20) DG(C22):DC(B19) DG(C23):DC(B18) DA(C24):DT(B17) DA(C25):DT(B16) DA(C26):DT(B15) DA(C27):DT(B14) DG(C28):DC(B13) DT(C29):DA(B12) DA(C30):DT(B11) DT(C31):DA(B10) DA(C32):DT(B9) DC(C33):DG(B8) DT(C34):DA(B7) DT(C35):DA(B6) DT(C36):DA(B5) DT(C37):DA(B4) DC(C38):DG(B3) DC(C39):DG(B2) DG(C40):DC(B1) chainA ( 13) ILE123 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 14) ARG124 0 0 0 0 0 0 0 0 0 0 8 10 18 18 0 0 0 0 0 0 ( 16) ARG126 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 ( 27) ASN137 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 31) ILE141 0 0 0 0 0 0 0 0 8 12 10 0 0 0 0 0 0 0 0 0 ( 32) TYR142 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG144 0 0 0 0 0 0 0 8 11 10 0 0 0 0 0 0 0 0 0 0 ( 44) ALA154 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 ( 48) TYR158 0 0 0 0 12 15 14 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG161 0 0 0 0 13 24 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sfqcsncsvtetIRwRnirskegiqcNacfIYqRkynktrpvtAvnkYqkRklkvq >2kdz_A:Homeodomain-like; title=STRUCTURE OF THE R2R3 DNA BINDING DOMAIN OF MYB1 PROTEIN FROM PROTOZOAN PARASITE TRICHOMONAS VAGINALIS IN COMPLEX WITH MRE-1/MRE- 2R DNA organism=TRICHOMONAS VAGINALIS DNA sequence DT(C17):DA(B16) DA(C18):DT(B15) DA(C19):DT(B14) DA(C20):DT(B13) DT(C21):DA(B12) DA(C22):DT(B11) DT(C23):DA(B10) DC(C24):DG(B9) DG(C25):DC(B8) DT(C26):DA(B7) DT(C27):DA(B6) DA(C28):DT(B5) DT(C29):DA(B4) DC(C30):DG(B3) DT(C31):DA(B2) DT(C32):DA(B1) chainA ( 35) ASN35 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 ( 37) ARG37 0 0 0 0 16 5 0 0 0 0 0 0 0 0 0 0 ( 38) GLN38 0 0 0 0 0 0 9 16 9 0 0 0 0 0 0 0 ( 41) GLU41 0 0 0 0 0 0 2 5 10 3 0 0 0 0 0 0 ( 88) ASN88 0 0 0 0 0 0 0 10 7 6 0 0 0 0 0 0 ( 92) ASN92 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 prot.sequence kvkfteeedlklqqlvmrygakdwirisqlmitrNpRQcrErwnnyinpalrtdpwspeedmlldqkyaeygpkwnkiskflknrsdNnirNrwmmiarhrakhqks >2kei_AB:lambda_repressor-like_DNA-binding_domains; title=REFINED SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1 organism=ESCHERICHIA COLI DNA sequence DA(D-1):DT(C22) DA(D1):DT(C21) DA(D2):DT(C20) DT(D3):DA(C19) DT(D4):DA(C18) DG(D5):DC(C17) DT(D6):DA(C16) DT(D7):DA(C15) DA(D8):DT(C14) DT(D9):DA(C13) DC(D10):DG(C12) DC(D11):DG(C11) DG(D12):DC(C10) DC(D13):DG(C9) DT(D14):DA(C8) DC(D15):DG(C7) DA(D16):DT(C6) DC(D17):DG(C5) DA(D18):DT(C4) DA(D19):DT(C3) DT(D20):DA(C2) DT(D21):DA(C1) DC(D22):DG(C-1) chainA ( 6) LEU6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 7) TYR7 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 11 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 22 1 0 0 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 18 0 0 0 0 ( 29) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 chainB ( 7) TYR7 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 3 18 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 2 14 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 18 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) HIS29 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkpvtLYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl/mkpvtlYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl >2kei_B:lambda_repressor-like_DNA-binding_domains; title=REFINED SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1 organism=ESCHERICHIA COLI DNA sequence DA(D-1):DT(C22) DA(D1):DT(C21) DA(D2):DT(C20) DT(D3):DA(C19) DT(D4):DA(C18) DG(D5):DC(C17) DT(D6):DA(C16) DT(D7):DA(C15) DA(D8):DT(C14) DT(D9):DA(C13) DC(D10):DG(C12) DC(D11):DG(C11) DG(D12):DC(C10) DC(D13):DG(C9) DT(D14):DA(C8) DC(D15):DG(C7) DA(D16):DT(C6) DC(D17):DG(C5) DA(D18):DT(C4) DA(D19):DT(C3) DT(D20):DA(C2) DT(D21):DA(C1) DC(D22):DG(C-1) chainB ( 7) TYR7 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 3 18 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 2 14 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 18 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) HIS29 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkpvtlYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl >2kej_A:lambda_repressor-like_DNA-binding_domains; title=SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O2 organism=ESCHERICHIA COLI DNA sequence DG(C-1):DC(D22) DA(C1):DT(D21) DA(C2):DT(D20) DA(C3):DT(D19) DT(C4):DA(D18) DG(C5):DC(D17) DT(C6):DA(D16) DG(C7):DC(D15) DA(C8):DT(D14) DG(C9):DC(D13) DC(C10):DG(D12) DG(C11):DC(D11) DA(C12):DT(D10) DG(C13):DC(D9) DT(C14):DA(D8) DA(C15):DT(D7) DA(C16):DT(D6) DC(C17):DG(D5) DA(C18):DT(D4) DA(C19):DT(D3) DC(C20):DG(D2) DC(C21):DG(D1) DG(C22):DC(D-1) chainA ( 6) LEU6 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) TYR7 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 13 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 13 16 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) HIS29 0 0 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkpvtLYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl >2kej_AB:lambda_repressor-like_DNA-binding_domains; title=SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O2 organism=ESCHERICHIA COLI DNA sequence DG(C-1):DC(D22) DA(C1):DT(D21) DA(C2):DT(D20) DA(C3):DT(D19) DT(C4):DA(D18) DG(C5):DC(D17) DT(C6):DA(D16) DG(C7):DC(D15) DA(C8):DT(D14) DG(C9):DC(D13) DC(C10):DG(D12) DG(C11):DC(D11) DA(C12):DT(D10) DG(C13):DC(D9) DT(C14):DA(D8) DA(C15):DT(D7) DA(C16):DT(D6) DC(C17):DG(D5) DA(C18):DT(D4) DA(C19):DT(D3) DC(C20):DG(D2) DC(C21):DG(D1) DG(C22):DC(D-1) chainA ( 6) LEU6 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) TYR7 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 13 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 13 16 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) HIS29 0 0 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 7) TYR7 0 0 0 0 0 0 0 0 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 8 11 6 1 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 11 5 0 0 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 12 0 0 0 0 ( 29) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 prot.sequence mkpvtLYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl/mkpvtlYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl >2kek_A:lambda_repressor-like_DNA-binding_domains; title=SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O3 organism=ESCHERICHIA COLI DNA sequence DG(D-1):DC(C22) DA(D1):DT(C21) DA(D2):DT(C20) DT(D3):DA(C19) DT(D4):DA(C18) DG(D5):DC(C17) DC(D6):DG(C16) DG(D7):DC(C15) DT(D8):DA(C14) DT(D9):DA(C13) DG(D10):DC(C12) DC(D11):DG(C11) DG(D12):DC(C10) DC(D13):DG(C9) DT(D14):DA(C8) DC(D15):DG(C7) DA(D16):DT(C6) DC(D17):DG(C5) DT(D18):DA(C4) DG(D19):DC(C3) DC(D20):DG(C2) DC(D21):DG(C1) DG(D22):DC(C-1) chainA ( 6) LEU6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 7) TYR7 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 14 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 16 4 0 0 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 prot.sequence mkpvtLYdvaeyagvSYQtvSRvvnqashvsaktrekveaamaelnyipnrcaqqLAgkqsl >2kek_AB:lambda_repressor-like_DNA-binding_domains; title=SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O3 organism=ESCHERICHIA COLI DNA sequence DG(D-1):DC(C22) DA(D1):DT(C21) DA(D2):DT(C20) DT(D3):DA(C19) DT(D4):DA(C18) DG(D5):DC(C17) DC(D6):DG(C16) DG(D7):DC(C15) DT(D8):DA(C14) DT(D9):DA(C13) DG(D10):DC(C12) DC(D11):DG(C11) DG(D12):DC(C10) DC(D13):DG(C9) DT(D14):DA(C8) DC(D15):DG(C7) DA(D16):DT(C6) DC(D17):DG(C5) DT(D18):DA(C4) DG(D19):DC(C3) DC(D20):DG(C2) DC(D21):DG(C1) DG(D22):DC(C-1) chainA ( 6) LEU6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 7) TYR7 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 14 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 16 4 0 0 0 0 0 ( 21) SER21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 chainB ( 7) TYR7 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 6 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) HIS29 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU56 0 0 0 0 0 0 0 0 0 0 0 10 15 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkpvtLYdvaeyagvSYQtvSRvvnqashvsaktrekveaamaelnyipnrcaqqLAgkqsl/mkpvtlYdvaeyagvsYQtvsRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl >2kkf_A: title=SOLUTION STRUCTURE OF MLL CXXC DOMAIN IN COMPLEX WITH PALINDROMIC CPG DNA organism=HOMO SAPIENS DNA sequence DC(C101):DG(B112) DC(C102):DG(B111) DC(C103):DG(B110) DT(C104):DA(B109) DG(C105):DC(B108) DC(C106):DG(B107) DG(C107):DC(B106) DC(C108):DG(B105) DA(C109):DT(B104) DG(C110):DC(B103) DG(C111):DC(B102) DG(C112):DC(B101) chainA ( 4) ARG1150 0 0 0 0 0 1 15 6 0 0 0 0 ( 37) ASN1183 0 0 0 0 0 0 0 0 3 0 0 0 ( 39) LYS1185 0 0 0 1 4 1 0 0 0 0 0 0 ( 40) LYS1186 0 0 0 0 0 0 9 12 3 0 0 0 ( 41) GLN1187 0 0 0 0 2 13 1 0 0 0 0 0 ( 44) LYS1190 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence kkgRrsrrcgqcpgcqvpedcgvctncldkpkfggrNiKKQccKmrkcqnlqwmpsk >2kmk_A:beta-beta-alpha_zinc_fingers; title=GFI-1 ZINC FINGERS 3-5 COMPLEXED WITH DNA organism=RATTUS NORVEGICUS DNA sequence DT(C201):DA(B116) DA(C202):DT(B115) DG(C203):DC(B114) DG(C204):DC(B113) DC(C205):DG(B112) DA(C206):DT(B111) DG(C207):DC(B110) DT(C208):DA(B109) DG(C209):DC(B108) DA(C210):DT(B107) DT(C211):DA(B106) DT(C212):DA(B105) DT(C213):DA(B104) DA(C214):DT(B103) DT(C215):DA(B102) DG(C216):DC(B101) chainA ( 2) PHE2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ARG13 0 0 13 14 0 3 0 0 0 0 0 0 0 0 0 0 ( 14) SER14 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) SER15 0 0 0 2 4 3 0 0 0 0 0 0 0 0 0 0 ( 16) THR16 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 ( 40) HIS40 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 41) GLN41 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 ( 43) SER43 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 44) ASP44 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 ( 47) LYS47 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 69) GLN69 0 0 0 0 0 0 0 0 0 3 11 3 0 0 0 0 ( 70) SER70 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 71) SER71 0 0 0 0 0 0 0 0 12 12 1 0 0 0 0 0 ( 72) ASN72 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 75) THR75 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence sFdckicgksfkRSSTlsthllihsdtrpypcqycgkrfHQkSDmkKhtfihtgekphkcqvcgkafsQSSNliThsrkhtg >2ko0_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=SOLUTION STRUCTURE OF THE THAP ZINC FINGER OF THAP1 IN COMPLEX WITH ITS DNA TARGET organism=HOMO SAPIENS DNA sequence DC(C17):DG(B16) DG(C18):DC(B15) DC(C19):DG(B14) DT(C20):DA(B13) DG(C21):DC(B12) DC(C22):DG(B11) DC(C23):DG(B10) DC(C24):DG(B9) DA(C25):DT(B8) DC(C26):DG(B7) DA(C27):DT(B6) DC(C28):DG(B5) DA(C29):DT(B4) DA(C30):DT(B3) DG(C31):DC(B2) DC(C32):DG(B1) chainA ( 1) MET1 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 ( 3) GLN3 0 0 0 7 5 3 0 0 0 0 0 0 0 0 0 0 ( 24) LYS24 0 0 0 0 0 0 2 10 14 0 0 0 0 0 0 0 ( 47) PRO47 0 0 0 4 4 3 0 0 0 0 0 0 0 0 0 0 ( 48) THR48 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 50) TYR50 0 0 0 0 0 14 13 0 0 0 0 0 0 0 0 0 ( 51) SER51 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 52) SER52 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 ( 65) ARG65 0 0 0 0 0 0 0 0 0 2 1 2 0 0 0 0 prot.sequence MvQscsaygcknrydkdkpvsfhKfpltrpslckeweaavrrknfkPTkYSSicsehftpdsfkResnnkllkenavptiflelvpr >2ktq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=OPEN TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS organism=Thermus aquaticus DNA sequence DG(B101):DC(D216) DA(B102):DT(D215) DC(B103):DG(D214) DC(B104):DG(D213) DA(B105):DT(D212) DC(B106):DG(D211) DG(B107):DC(D210) DG(B108):DC(D209) DC(B109):DG(D208) DG(B110):DC(D207) DC(B111):DG(D206) DOC(B112):DG(D205) chainA (246) LYS540 0 0 0 0 0 0 0 5 4 0 0 0 (251) TYR545 0 0 0 0 0 0 0 0 0 1 0 0 (279) ARG573 0 0 0 0 0 0 0 0 0 0 5 9 (286) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 (289) ASN583 0 0 0 0 0 0 0 0 0 9 1 0 (367) TYR671 0 0 0 0 0 0 0 0 0 0 0 27 (446) ASN750 0 0 0 0 0 0 0 0 0 0 0 1 (450) GLN754 0 0 0 0 0 0 0 0 0 0 0 4 (480) HIS784 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence eeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlkstYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetasdplmrraaktinfgvlYgmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >2ky8_A:DNA-binding_domain; title=SOLUTION STRUCTURE AND DYNAMIC ANALYSIS OF CHICKEN MBD2 METHYL BINDING DOMAIN BOUND TO A TARGET METHYLATED DNA SEQUENCE organism=GALLUS GALLUS DNA sequence DA(C112):DC(B110) DG(C113):DC(B108) DC(C114):DG(B107) DG(C116):DG(B106) DA(C117):DT(B104) DT(C118):DA(B103) DC(C120):DA(B102) DC(C121):DG(B101) chainA ( 22) ARG24 0 0 1 10 0 0 0 0 ( 30) LYS32 0 6 7 0 0 0 0 0 ( 44) ARG46 0 0 0 10 5 0 0 0 prot.sequence dkqgrtdcpalppgwkkeeviRksglsagKsdvyyfspsgkkfRskpqlarylgnavdlscfdfrtgkmm >2l1g_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=RDC REFINED SOLUTION STRUCTURE OF THE THAP ZINC FINGER OF THAP1 IN COMPLEX WITH ITS 16BP RRM1 DNA TARGET organism=HOMO SAPIENS DNA sequence DC(C17):DG(B16) DG(C18):DC(B15) DC(C19):DG(B14) DT(C20):DA(B13) DG(C21):DC(B12) DC(C22):DG(B11) DC(C23):DG(B10) DC(C24):DG(B9) DA(C25):DT(B8) DC(C26):DG(B7) DA(C27):DT(B6) DC(C28):DG(B5) DA(C29):DT(B4) DA(C30):DT(B3) DG(C31):DC(B2) DC(C32):DG(B1) chainA ( 1) MET1 0 0 0 6 8 13 0 0 0 0 0 0 0 0 0 0 ( 2) VAL2 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 ( 3) GLN3 0 0 2 8 3 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS24 0 0 0 0 0 0 4 9 13 0 0 0 0 0 0 0 ( 47) PRO47 0 0 0 4 4 2 0 0 0 0 0 0 0 0 0 0 ( 48) THR48 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 50) TYR50 0 0 0 0 0 14 13 0 0 0 0 0 0 0 0 0 ( 51) SER51 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 52) SER52 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 65) ARG65 0 0 0 0 0 0 0 0 0 3 1 4 0 0 0 0 prot.sequence MVQscsaygcknrydkdkpvsfhKfpltrpslckeweaavrrknfkPTkYSSicsehftpdsfkResnnkllkenavptiflelvpr >2ld5_A:Homeodomain-like; title=SOLUTION NMR-DERIVED COMPLEX STRUCTURE OF HOXA13 DNA BINDING DOMAIN BOUND TO DNA organism=MUS MUSCULUS DNA sequence DC(B1):DG(C22) DA(B2):DT(C21) DA(B3):DT(C20) DA(B4):DT(C19) DT(B5):DA(C18) DA(B6):DT(C17) DA(B7):DT(C16) DA(B8):DT(C15) DA(B9):DT(C14) DT(B10):DA(C13) DC(B11):DG(C12) chainA ( 4) LYS10 0 0 0 0 0 0 0 1 10 9 0 ( 5) ARG11 0 0 0 0 0 10 16 14 3 0 0 ( 43) ARG49 0 0 0 1 0 0 0 0 0 0 0 ( 44) GLN50 0 0 0 2 0 0 0 0 0 0 0 ( 47) ILE53 0 0 1 12 2 0 0 0 0 0 0 ( 50) GLN56 0 10 9 2 0 0 0 0 0 0 0 ( 51) ASN57 0 0 0 1 11 13 0 0 0 0 0 ( 54) VAL60 0 0 0 5 4 2 0 0 0 0 0 ( 55) LYS61 0 0 0 0 0 3 0 0 0 0 0 ( 58) LYS64 0 0 0 0 0 0 3 0 0 0 0 prot.sequence grkKRvpytkvqlkelereyatnkfitkdkrrrisattnlseRQvtIwfQNrrVKekKvinklktts >2lef_A:HMG-box; title=LEF1 HMG DOMAIN (FROM MOUSE), COMPLEXED WITH DNA (15BP), NMR, 12 STRUCTURES organism=MUS MUSCULUS DNA sequence DG(C1):DC(B15) DA(C2):DT(B14) DG(C3):DC(B13) DC(C4):DG(B12) DT(C5):DA(B11) DT(C6):DA(B10) DC(C7):DG(B9) DA(C8):DT(B8) DA(C9):DT(B7) DA(C10):DT(B6) DG(C11):DC(B5) DG(C12):DC(B4) DG(C13):DC(B3) DT(C14):DA(B2) DG(C15):DC(B1) chainA ( 5) LYS5 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 8) ASN8 0 0 0 0 0 0 11 6 0 0 0 0 0 0 0 ( 11) MET11 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 ( 14) MET14 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 29) GLU29 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 30) SER30 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 ( 31) ALA31 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 34) ASN34 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 ( 76) TYR76 0 0 0 8 5 5 0 0 0 0 0 0 0 0 0 ( 81) LYS81 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 ( 82) ARG82 0 0 0 0 0 0 0 0 0 8 15 5 0 0 0 ( 83) LYS83 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 86) LYS86 0 0 0 0 4 13 5 4 0 0 0 0 0 0 0 prot.sequence mhikKplNafMlyMkemranvvaestlkESAaiNqilgrrwhalsreeqakyyelarkerqlhmqlypgwsardnYgkkkKRKreK >2lev_A:H-NS_histone-like_proteins; title=STRUCTURE OF THE DNA COMPLEX OF THE C-TERMINAL DOMAIN OF LER organism=ESCHERICHIA COLI DNA sequence DG(B1):DC(C30) DC(B2):DG(C29) DG(B3):DC(C28) DA(B4):DT(C27) DT(B5):DA(C26) DA(B6):DT(C25) DA(B7):DT(C24) DT(B8):DA(C23) DT(B9):DA(C22) DG(B10):DC(C21) DA(B11):DT(C20) DT(B12):DA(C19) DA(B13):DT(C18) DG(B14):DC(C17) DG(B15):DC(C16) chainA ( 31) ARG21 0 0 0 0 0 0 1 11 14 13 0 0 0 0 0 prot.sequence shhhhhhsmgnsskgvyyrneegqtwsgvgRqprwlkeallngmkkedflvkdteee >2lex_A:WRKY_DNA-binding_domain; title=COMPLEX OF THE C-TERMINAL WRKY DOMAIN OF ATWRKY4 AND A W-BOX DNA organism=ARABIDOPSIS THALIANA DNA sequence DT(C21):DA(B12) DG(C22):DC(B11) DG(C23):DC(B10) DT(C24):DA(B9) DC(C25):DG(B8) DA(C26):DT(B7) DA(C27):DT(B6) DA(C28):DT(B5) DG(C29):DC(B4) DG(C30):DC(B3) chainA ( 9) ARG415 0 0 0 0 0 3 0 5 0 0 ( 10) LYS416 0 0 0 0 0 1 0 0 0 0 ( 11) TYR417 0 0 0 6 1 0 0 0 0 0 ( 13) GLN419 0 0 0 0 0 3 0 0 0 0 ( 14) LYS420 0 3 6 0 0 0 0 0 0 0 ( 25) TYR431 0 0 0 2 0 0 0 0 0 0 prot.sequence llddgyrwRKYgQKvvkgnpyprsYykcttpgcgvrkhveraatdpkavvttyegkhnhdlpa >2lkx_A:Homeodomain-like; title=NMR STRUCTURE OF THE HOMEODOMAIN OF PITX2 IN COMPLEX WITH A TAATCC DNA BINDING SITE organism=HOMO SAPIENS DNA sequence DC(C80):DG(B79) DG(C81):DC(B78) DG(C82):DC(B77) DG(C83):DC(B76) DG(C84):DC(B75) DA(C85):DT(B74) DT(C86):DA(B73) DT(C87):DA(B72) DA(C88):DT(B71) DG(C89):DC(B70) DA(C90):DT(B69) DG(C91):DC(B68) DC(C92):DG(B67) chainA ( 5) ARG3 0 0 0 0 0 2 6 9 0 0 0 0 0 ( 7) ARG5 0 0 0 0 0 0 0 1 11 18 0 0 0 ( 49) VAL47 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 52) LYS50 0 0 0 9 5 7 0 0 0 0 0 0 0 ( 53) ASN51 0 0 0 0 0 1 10 7 0 0 0 0 0 ( 57) LYS55 0 0 0 0 0 0 2 7 4 0 0 0 0 prot.sequence gsqrRqRthftsqqlqeleatfqrnrypdmstreeiavwtnltearvrVwfKNrraKwrkreefivtd >2lt7_A:beta-beta-alpha_zinc_fingers; title=SOLUTION NMR STRUCTURE OF KAISO ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH KAISO BINDING SITE DNA organism=HOMO SAPIENS DNA sequence DG(D1):DC(E38) DT(D2):DA(E37) DG(D3):DC(E36) DC(D4):DG(E35) DT(D5):DA(E34) DT(D6):DA(E33) DC(D7):DG(E32) DC(D8):DG(E31) DT(D9):DA(E30) DG(D10):DC(E29) DC(D11):DG(E28) DC(D12):DG(E27) DA(D13):DT(E26) DA(D14):DT(E25) DT(D15):DA(E24) DA(D16):DT(E23) DA(D17):DT(E22) DC(D18):DG(E21) DG(D19):DC(E20) chainA ( 6) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 36) THR507 0 0 0 0 0 0 0 0 0 0 0 5 5 4 0 0 0 0 0 ( 37) SER508 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 39) ARG510 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 40) ARG511 0 0 0 0 0 0 0 0 17 12 8 3 0 0 0 0 0 0 0 ( 62) LEU533 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 64) GLU535 0 0 0 0 0 0 0 0 4 6 14 0 0 0 0 0 0 0 0 ( 65) TYR536 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 ( 90) ASN561 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) TYR562 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 92) GLN563 0 0 0 0 1 8 8 1 0 0 0 0 0 0 0 0 0 0 0 ( 93) PHE564 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) ARG595 0 0 0 0 0 0 0 0 0 0 5 14 6 0 0 0 0 0 0 (126) TYR597 0 0 0 0 0 0 0 0 0 0 5 5 2 0 0 0 0 0 0 prot.sequence ankrmkvkhddhyelivdgrvyyicivckrsyvclTslrRhfnihswekkypcrycekvfplaEyrtkheihhtgerryqclacgksfinyQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqYaylsdrs >2ltt_AB: title=SOLUTION NMR STRUCTURE OF YDBC:DT19G1 COMPLEX. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET KR150 organism=LACTOCOCCUS LACTIS SUBSP. LACTIS DNA sequence DT(C1) DT(C2) DT(C3) DT(C4) DT(C5) DT(C6) DT(C7) DT(C11) DT(C12) DT(C13) DT(C14) DT(C15) DT(C16) DT(C17) chainA ( 5) LEU5 0 0 0 9 5 0 0 0 0 0 0 0 0 0 ( 7) PHE7 0 0 0 18 1 0 0 0 0 0 0 0 0 0 ( 20) ALA20 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LYS21 11 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) TRP23 0 18 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) VAL30 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 32) TRP32 0 0 0 0 40 0 4 0 0 0 0 0 0 0 ( 33) ASN33 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 35) ALA35 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 38) LYS38 0 0 0 0 0 0 17 0 0 0 0 0 0 0 ( 40) ASP40 0 0 0 0 11 0 0 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 10 19 0 0 0 0 0 0 0 0 0 ( 43) THR43 0 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TRP44 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 45) SER45 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLU49 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 50) LYS50 0 0 15 0 0 0 0 0 0 0 0 0 0 0 ( 51) MET51 0 0 0 12 0 0 0 0 0 0 0 0 0 0 ( 53) LYS53 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) THR56 0 0 0 0 3 0 6 0 0 0 0 0 0 0 ( 58) SER58 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 61) GLU61 0 0 0 0 0 0 2 0 0 0 0 0 0 0 chainB ( 5) LEU5 0 0 0 0 0 0 0 0 0 0 9 6 0 0 ( 7) PHE7 0 0 0 0 0 0 0 0 0 0 18 0 0 0 ( 20) ALA20 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 21) LYS21 0 0 0 0 0 0 0 16 0 0 0 0 0 0 ( 23) TRP23 0 0 0 0 0 0 0 0 17 0 0 0 0 0 ( 25) LYS25 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 30) VAL30 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 32) TRP32 0 0 0 0 0 0 0 0 0 0 0 42 0 5 ( 33) ASN33 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 35) ALA35 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 38) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 19 ( 40) ASP40 0 0 0 0 0 0 0 0 0 0 0 10 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 10 19 0 0 ( 43) THR43 0 0 0 0 0 0 0 0 7 0 0 0 0 0 ( 44) TRP44 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 45) SER45 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 49) GLU49 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 50) LYS50 0 0 0 0 0 0 0 0 0 15 0 0 0 0 ( 51) MET51 0 0 0 0 0 0 0 0 0 0 11 0 0 0 ( 53) LYS53 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 56) THR56 0 0 0 0 0 0 0 0 0 0 0 2 0 9 ( 58) SER58 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 61) GLU61 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence madkLkFeiieelivlsenAKgWrkelnrVsWNdAepKyDiRTWSpdhEKMgKgiTlSeeEfgvllkelgnkle/madkLkFeiieelivlsenAKgWrKelnrVsWNdAepKyDiRTWSpdhEKMgKgiTlSeeEfgvllkelgnkle >2ltt_B: title=SOLUTION NMR STRUCTURE OF YDBC:DT19G1 COMPLEX. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET KR150 organism=LACTOCOCCUS LACTIS SUBSP. LACTIS DNA sequence DT(C1) DT(C2) DT(C3) DT(C4) DT(C5) DT(C6) DT(C7) DT(C11) DT(C12) DT(C13) DT(C14) DT(C15) DT(C16) DT(C17) chainB ( 5) LEU5 0 0 0 0 0 0 0 0 0 0 9 6 0 0 ( 7) PHE7 0 0 0 0 0 0 0 0 0 0 18 0 0 0 ( 20) ALA20 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 21) LYS21 0 0 0 0 0 0 0 16 0 0 0 0 0 0 ( 23) TRP23 0 0 0 0 0 0 0 0 17 0 0 0 0 0 ( 25) LYS25 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 30) VAL30 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 32) TRP32 0 0 0 0 0 0 0 0 0 0 0 42 0 5 ( 33) ASN33 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 35) ALA35 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 38) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 19 ( 40) ASP40 0 0 0 0 0 0 0 0 0 0 0 10 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 10 19 0 0 ( 43) THR43 0 0 0 0 0 0 0 0 7 0 0 0 0 0 ( 44) TRP44 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 45) SER45 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 49) GLU49 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 50) LYS50 0 0 0 0 0 0 0 0 0 15 0 0 0 0 ( 51) MET51 0 0 0 0 0 0 0 0 0 0 11 0 0 0 ( 53) LYS53 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 56) THR56 0 0 0 0 0 0 0 0 0 0 0 2 0 9 ( 58) SER58 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 61) GLU61 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence madkLkFeiieelivlsenAKgWrKelnrVsWNdAepKyDiRTWSpdhEKMgKgiTlSeeEfgvllkelgnkle >2m2w_A:Nucleotidyltransferase; title=TERNARY COMPLEX OF ASFV POL X WITH DNA AND MGDGTP organism=AFRICAN SWINE FEVER VIRUS DNA sequence DA(B21) DC(B20) DG(B19) DA(B18) DA(B17) DG(B16) DC(B15) DG(B14) DT(B13) DG(B12) DG(B11) DG(B10) DC(B9) DG(B1):DC(B9) DG(B2):DC(B8) DC(B3):DG(B7) DG(B4) DA(B5) DA(B6) chainA ( 83) GLU83 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 (115) HIS115 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (120) VAL120 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (124) ILE124 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (127) ARG127 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (132) LYS132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgErkcvlfiewekktyqldlftalaeekpyaifHftgpVsylIriRaalkKknyklnqyglfknqtlvplkittekelikelgftyripkkrl >2me6_A:Homeodomain-like; title=NMR STRUCTURE OF THE HOMEODOMAIN TRANSCRIPTION FACTOR GBX1 FROM HOMO SAPIENS IN COMPLEX WITH THE DNA SEQUENCE CGACTAATTAGTCG organism=HOMO SAPIENS DNA sequence DC(B1):DG(C28) DG(B2):DC(C27) DA(B3):DT(C26) DC(B4):DG(C25) DT(B5):DA(C24) DA(B6):DT(C23) DA(B7):DT(C22) DT(B8):DA(C21) DT(B9):DA(C20) DA(B10):DT(C19) DG(B11):DC(C18) DT(B12):DA(C17) DC(B13):DG(C16) DG(B14):DC(C15) chainA ( 8) ARG8 0 0 0 0 0 0 0 14 12 6 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 12 16 5 0 0 ( 49) VAL49 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 52) LYS52 0 0 0 6 5 0 0 0 0 0 0 0 0 0 ( 53) ILE53 0 0 0 0 0 0 3 8 0 0 0 0 0 0 ( 56) GLN56 0 0 0 0 5 14 6 0 0 0 0 0 0 0 ( 57) ASN57 0 0 0 0 0 0 0 1 4 0 0 0 0 0 ( 64) ARG64 0 0 0 0 0 0 0 0 0 4 1 0 0 0 prot.sequence sapggksRrRrtaftseqllelekefhckkylsltersqiahalklseVqvKIwfQNrrakwkRikagnvs >2mf8_A:CCHHC_domain; title=HADDOCK MODEL OF MYT1 F4F5 - DNA COMPLEX organism=MUS MUSCULUS DNA sequence DA(B1):DT(C26) DC(B2):DG(C25) DC(B3):DG(C24) DG(B4):DC(C23) DA(B5):DT(C22) DA(B6):DT(C21) DA(B7):DT(C20) DG(B8):DC(C19) DT(B9):DA(C18) DT(B10):DA(C17) DC(B11):DG(C16) DA(B12):DT(C15) DC(B13):DG(C14) chainA ( 21) SER819 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 23) ARG821 0 0 0 0 0 12 14 9 0 0 0 0 0 ( 24) SER822 0 0 0 0 0 6 9 0 0 0 0 0 0 ( 25) LEU823 0 0 0 0 2 12 0 0 0 0 0 0 0 ( 26) SER824 0 0 0 0 7 7 0 0 0 0 0 0 0 ( 65) SER863 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 67) ARG865 0 0 0 0 0 0 0 0 13 13 0 0 0 ( 68) SER866 0 0 0 0 0 0 0 0 10 4 0 0 0 ( 69) LEU867 0 0 0 0 0 0 0 0 2 9 0 0 0 ( 70) SER868 0 0 0 0 0 0 0 0 0 6 4 0 0 prot.sequence lltcptpgcdgsghitgnyaShRSLSgcpladkslrnlmaahsadlkcptpgcdgsghitgnyaShRSLSgcpra >2moe_A:DNA-binding_domain; title=SOLUTION STRUCTURE OF MBD4 METHYL-CYTOSINE BINDING DOMAIN BOUND TO METHYLATED DNA organism=HOMO SAPIENS DNA sequence DG(B201):DC(C220) DG(B202):DC(C219) DA(B203):DT(C218) DT(B204):DA(C217) 5CM(B205):DG(C216) DG(B206):5CM(C215) DG(B207):DC(C214) DC(B208):DG(C213) DT(B209):DA(C212) DC(B210):DG(C211) chainA ( 20) ARG97 0 0 0 0 0 11 0 0 0 0 ( 24) LYS101 0 0 0 0 0 1 5 1 0 0 ( 25) THR102 0 0 0 0 0 8 3 0 0 0 ( 28) ARG105 0 0 0 0 0 0 5 4 0 0 ( 42) ARG119 0 0 0 5 12 0 0 0 0 0 prot.sequence gstecrksvpcgwervvkqRlfgKTagRfdvyfispqglkfRsksslanylhkngetslkpedfdftvlsk >2mru_A:AbrB/MazE/MraZ-like; title=STRUCTURE OF TRUNCATED ECMAZE-DNA COMPLEX organism=ESCHERICHIA COLI K-12 DNA sequence DG(Y1):DC(X15) DC(Y2):DG(X14) DA(Y3):DT(X13) DC(Y4):DG(X12) DT(Y5):DA(X11) DA(Y6):DT(X10) DT(Y7):DA(X9) DA(Y8):DT(X8) DT(Y9):DA(X7) DA(Y10):DT(X6) DT(Y11):DA(X5) DC(Y12):DG(X4) DA(Y13):DT(X3) DC(Y14):DG(X2) DG(Y15):DC(X1) chainA ( 7) LYS7 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 9) TRP9 0 0 0 0 0 0 0 10 11 1 0 0 0 0 0 ( 11) ASN11 0 0 0 0 0 0 0 0 0 0 11 15 0 0 0 ( 12) SER12 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 16) ARG16 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 prot.sequence gihssvKrWgNSpavRipatlmqalnlniddevkidlvdgkliiepvrke >2mru_AB:AbrB/MazE/MraZ-like; title=STRUCTURE OF TRUNCATED ECMAZE-DNA COMPLEX organism=ESCHERICHIA COLI K-12 DNA sequence DC(X1):DG(Y15) DG(X2):DC(Y14) DT(X3):DA(Y13) DG(X4):DC(Y12) DA(X5):DT(Y11) DT(X6):DA(Y10) DA(X7):DT(Y9) DT(X8):DA(Y8) DA(X9):DT(Y7) DT(X10):DA(Y6) DA(X11):DT(Y5) DG(X12):DC(Y4) DT(X13):DA(Y3) DG(X14):DC(Y2) DC(X15):DG(Y1) chainA ( 7) LYS7 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 9) TRP9 0 0 0 0 0 1 11 10 0 0 0 0 0 0 0 ( 11) ASN11 0 0 0 15 11 0 0 0 0 0 0 0 0 0 0 ( 12) SER12 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 ( 16) ARG16 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 chainB ( 9) TRP9 0 0 0 0 0 0 0 7 13 0 0 0 0 0 0 ( 11) ASN11 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 ( 12) SER12 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 16) ARG16 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence gihssvKrWgNSpavRipatlmqalnlniddevkidlvdgkliiepvrke/gihssvkrWgNSpavRipatlmqalnlniddevkidlvdgkliiepvrke >2mxf_A: title=STRUCTURE OF THE DNA COMPLEX OF THE C-TERMINAL DOMAIN OF MVAT organism=PSEUDOMONAS AERUGINOSA PAO1 DNA sequence DC(C13):DG(B12) DG(C14):DC(B11) DC(C15):DG(B10) DA(C16):DT(B9) DT(C17):DA(B8) DA(C18):DT(B7) DT(C19):DA(B6) DA(C20):DT(B5) DT(C21):DA(B4) DG(C22):DC(B3) DC(C23):DG(B2) DG(C24):DC(B1) chainA ( 2) ARG80 0 0 0 0 0 0 4 13 8 0 0 0 ( 22) ASN100 0 0 0 7 10 4 0 0 0 0 0 0 prot.sequence aRkvkqyknphtgevietkggNhktlkewkakwgpeaveswatllgh >2n8a_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=1H, 13C AND 15N CHEMICAL SHIFT ASSIGNMENTS AND SOLUTION STRUCTURE FOR PARP-1 F1F2 DOMAINS IN COMPLEX WITH A DNA SINGLE-STRAND BREAK organism=HOMO SAPIENS DNA sequence DC(B44) DG(B43) DC(B42) DC(B41) DA(B40) DG(B39) DT(B38) DC(B37) DG(B36) DT(B35) DT(B34) DC(B33) DG(B32) DA(B31) DC(B30) DT(B29) DG(B28) DG(B27) DC(B26) DG(B25) DC(B24) DT(B23) DC(B22) DG(B1):DC(B22) DC(B2):DG(B21) DT(B3):DA(B20) DG(B4):DC(B19) DG(B5):DC(B18) DC(B6):DG(B17) DT(B7):DA(B16) DT(B8):DA(B15) DC(B9):DG(B14) DG(B10):DA(B13) DT(B11) DA(B12) chainA ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 ( 41) SER41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 53 0 0 0 0 0 0 0 0 0 0 0 ( 48) VAL48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 3 0 0 0 0 0 0 0 0 0 0 0 ( 49) PRO49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (122) ARG122 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) GLN150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) LEU151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence maessdklyrveyaksgRasckkcsesipkdslrmaimvqSpmFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaggvtgkgqdgigskaektlgdfaaeyaksnRstckgcmekiekgqvrlskkmvdpekpQLgmIdrwyhpgcfvknreelgfrpeysasqlkgfsllatedkealkkqlpgvksegkrkgdevd >2nbj_A:Chromosomal_protein_MC1; title=DNA-ARCHEAL MC1 PROTEIN COMPLEX STRUCTURE BY NMR organism=METHANOSARCINA THERMOPHILA CHTI-55 DNA sequence DA(B1):DT(C30) DA(B2):DT(C29) DA(B3):DT(C28) DA(B4):DT(C27) DA(B5):DT(C26) DC(B6):DG(C25) DA(B7):DT(C24) DC(B8):DG(C23) DA(B9):DT(C22) DC(B10):DG(C21) DA(B11):DT(C20) DC(B12):DG(C19) DC(B13):DG(C18) DC(B14):DG(C17) DA(B15):DT(C16) chainA ( 23) GLN23 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 72) PRO72 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 73) ALA73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 74) TRP74 0 0 0 0 0 0 0 0 0 0 0 0 0 15 49 ( 91) LYS91 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sntrnfvlrdedgnehgvftgkQprqaalkaanrgsgtkanpdiirlrergtkkvhvfkawkeivdapknrPAWmpekiskpfvkkerieKle >2nl8_A:Origin_of_replication-binding_domain,_RBD-like; title=THE ORIGIN BINDING DOMAIN OF THE SV40 LARGE T ANTIGEN BOUND NON SPECIFICALLY TO A 17 BP PALINDROME DNA (SITES 1 AND 3) organism=Simian virus 40 DNA sequence DC(W10) DG(W11) DA(W12) DG(W13) DG(W14) DC(W15) DC(W16) DA(W17) DT(W18) DC(W19) DA(W20) DT(W21) DG(W22) DG(W23) DC(W24) DC(W25) DT(W26) DC(W27) chainA ( 21) ASN153 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) THR155 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG204 0 0 0 18 13 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence edpkdfpsellsflshavfsNrTlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphrhRvsainnyaqklstfsflickgvnkeylmysaltrdpfsvieeslp >2nll_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=RETINOID X RECEPTOR-THYROID HORMONE RECEPTOR DNA-BINDING DOMAIN HETERODIMER BOUND TO THYROID RESPONSE ELEMENT DNA organism=HOMO SAPIENS DNA sequence DC(C502):DG(D538) DA(C503):DT(D537) DG(C504):DC(D536) DG(C505):DC(D535) DT(C506):DA(D534) DC(C507):DG(D533) DA(C508):DT(D532) DT(C509):DA(D531) DT(C510):DA(D530) 5IU(C511):DA(D529) DC(C512):DG(D528) DA(C513):DT(D527) DG(C514):DC(D526) DG(C515):DC(D525) DT(C516):DA(D524) DC(C517):DG(D523) DA(C518):DT(D522) DG(C519):DC(D521) chainA ( 19) GLU153 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS156 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS160 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG161 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) GLU321 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 ( 25) LYS324 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 ( 29) ARG328 0 0 0 0 0 0 0 0 0 0 0 0 5 12 4 0 0 0 ( 30) ARG329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 ( 85) LYS384 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 prot.sequence caicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgm/delcvvcgdkatgyhyrcitcEgcKgffRRtiqknlhpsysckyegkcvidkvtrnqcqecrfkkciyvgmatdlvlddskrlaKrklieenrekrrreelek >2nll_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=RETINOID X RECEPTOR-THYROID HORMONE RECEPTOR DNA-BINDING DOMAIN HETERODIMER BOUND TO THYROID RESPONSE ELEMENT DNA organism=HOMO SAPIENS DNA sequence DC(D521):DG(C519) DT(D522):DA(C518) DG(D523):DC(C517) DA(D524):DT(C516) DC(D525):DG(C515) DC(D526):DG(C514) DT(D527):DA(C513) DG(D528):DC(C512) DA(D529):5IU(C511) DA(D530):DT(C510) DA(D531):DT(C509) DT(D532):DA(C508) DG(D533):DC(C507) DA(D534):DT(C506) DC(D535):DG(C505) DC(D536):DG(C504) DT(D537):DA(C503) DG(D538):DC(C502) chainB ( 22) GLU321 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS324 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG328 0 0 0 4 12 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG329 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) LYS384 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence delcvvcgdkatgyhyrcitcEgcKgffRRtiqknlhpsysckyegkcvidkvtrnqcqecrfkkciyvgmatdlvlddskrlaKrklieenrekrrreelek >2nny_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ETS1 DIMER DNA COMPLEX. organism=Homo sapiens DNA sequence DC(D2):DG(C23) DT(D3):DA(C22) DC(D4):DG(C21) DC(D5):DG(C20) DA(D6):DT(C19) DG(D7):DC(C18) DG(D8):DC(C17) DA(D9):DT(C16) DA(D10):DT(C15) DG(D11):DC(C14) DT(D12):DA(C13) DG(D13):DC(C12) DC(D14):DG(C11) DT(D15):DA(C10) DT(D16):DA(C9) DC(D17):DG(C8) DC(D18):DG(C7) DT(D19):DA(C6) DG(D20):DC(C5) DT(D21):DA(C4) DC(D22):DG(C3) DT(D23):DA(C2) chainA ( 80) GLU387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 ( 81) LYS388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 84) ARG391 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 16 26 0 0 0 0 0 ( 87) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 11 0 0 0 0 ( 88) TYR395 0 0 0 0 0 0 0 0 0 0 0 0 7 6 6 0 0 0 0 0 0 0 prot.sequence vrdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkssqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvsdlqsllgytpeelhamldvk >2nny_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ETS1 DIMER DNA COMPLEX. organism=Homo sapiens DNA sequence DA(C2):DT(D23) DG(C3):DC(D22) DA(C4):DT(D21) DC(C5):DG(D20) DA(C6):DT(D19) DG(C7):DC(D18) DG(C8):DC(D17) DA(C9):DT(D16) DA(C10):DT(D15) DG(C11):DC(D14) DC(C12):DG(D13) DA(C13):DT(D12) DC(C14):DG(D11) DT(C15):DA(D10) DT(C16):DA(D9) DC(C17):DG(D8) DC(C18):DG(D7) DT(C19):DA(D6) DG(C20):DC(D5) DG(C21):DC(D4) DA(C22):DT(D3) DG(C23):DC(D2) chainA ( 80) GLU387 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) LYS388 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG391 0 0 0 0 0 26 16 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG394 0 0 0 0 11 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) TYR395 0 0 0 0 0 0 0 6 6 7 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 80) GLU387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 81) LYS388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 84) ARG391 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 16 23 0 0 0 0 0 ( 87) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 12 0 0 0 0 ( 88) TYR395 0 0 0 0 0 0 0 0 0 0 0 0 7 8 6 0 0 0 0 0 0 0 (102) ARG409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence vrdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkssqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvsdlqsllgytpeelhamldvk/vrdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkssqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkRyvyrfvsdlqsllgytpeelhamldvk >2nob_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURE OF CATALYTICALLY INACTIVE H270A HUMAN 8-OXOGUANINE GLYCOSYLASE CROSSLINKED TO 8-OXOGUANINE DNA organism=Homo sapiens DNA sequence DG(B3):DC(C31) DT(B4):DA(C30) DA(B5):DT(C29) DG(B6):DC(C28) DA(B7):DT(C27) DC(B8):DG(C26) DC(B9):8OG(C25) DT(B10):DA(C24) DG(B11):DC(C23) DG(B12):DC(C22) DA(B13):DT(C21) DC(B14):DG(C20) DG(B15):DC(C19) chainA ( 37) PHE45 0 0 0 0 0 0 2 0 0 0 0 0 0 (133) PHE144 0 0 0 0 0 0 4 0 0 0 0 0 0 (137) SER148 0 0 0 0 0 12 0 0 0 0 0 0 0 (138) CYS149 0 0 0 0 0 12 1 6 0 0 0 0 0 (140) ASN151 0 0 0 0 0 0 0 4 1 0 0 0 0 (141) ILE152 0 0 0 0 0 0 1 0 0 0 0 0 0 (143) ARG154 0 0 0 0 0 0 3 21 0 0 0 0 0 (144) ILE155 0 0 0 0 0 0 1 0 0 0 0 0 0 (192) TYR203 0 0 0 0 0 36 12 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 7 0 0 0 0 0 0 (238) GLN249 0 0 0 0 0 0 2 0 0 0 0 0 0 (246) MET257 0 0 0 0 0 0 2 0 0 0 0 0 0 (255) PRO266 0 0 0 0 0 0 6 0 0 0 0 0 0 (257) ASP268 0 0 0 0 0 0 11 0 0 0 0 0 0 (260) MET271 0 0 0 0 0 0 1 0 0 0 0 0 0 (282) PRO293 0 1 0 0 0 0 0 0 0 0 0 0 0 (304) GLN315 0 0 0 0 0 0 9 0 0 0 0 0 0 (308) PHE319 0 0 0 0 0 0 43 0 0 0 0 0 0 prot.sequence sefghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficsSCnNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRaryvsasaraileeqgglawlqqlressyeeahkalcilpgvgtqvadciclmaldkpqavpvdvamwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaqavlfsadlrq >2noe_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURE OF CATALYTICALLY INACTIVE G42A HUMAN 8-OXOGUANINE GLYCOSYLASE COMPLEXED TO 8-OXOGUANINE DNA organism=Homo sapiens DNA sequence DG(B3):DC(C31) DT(B4):DA(C30) DA(B5):DT(C29) DG(B6):DC(C28) DA(B7):DT(C27) DC(B8):DG(C26) DC(B9):8OG(C25) DT(B10):DA(C24) DG(B11):DC(C23) DG(B12):DC(C22) DA(B13):DT(C21) DC(B14):DG(C20) DG(B15):DC(C19) chainA ( 34) ALA42 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 37) PHE45 0 0 0 0 0 0 2 0 0 0 0 0 0 (133) PHE144 0 0 0 0 0 0 5 0 0 0 0 0 0 (136) SER147 0 0 0 0 0 0 1 0 0 0 0 0 0 (138) ASN149 0 0 0 0 0 58 5 9 0 0 0 0 0 (139) ASN150 0 0 0 0 0 0 0 3 0 0 0 0 0 (140) ASN151 0 0 0 0 0 0 0 4 1 0 0 0 0 (141) ILE152 0 0 0 0 0 0 1 0 0 0 0 0 0 (143) ARG154 0 0 0 0 0 0 11 12 0 0 0 0 0 (144) ILE155 0 0 0 0 0 0 1 0 0 0 0 0 0 (192) TYR203 0 0 0 0 0 14 14 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 11 0 0 0 0 0 0 (196) TYR207 0 0 0 0 1 0 0 0 0 0 0 0 0 (238) GLN249 0 0 0 0 0 0 4 0 0 0 0 0 0 (242) CYS253 0 0 0 0 0 0 2 0 0 0 0 0 0 (246) MET257 0 0 0 0 0 0 3 0 0 0 0 0 0 (255) PRO266 0 0 0 0 0 0 5 0 0 0 0 0 0 (257) ASP268 0 0 0 0 0 0 10 0 0 0 0 0 0 (260) MET271 0 0 0 0 0 0 1 0 0 0 0 0 0 (282) PRO293 0 2 0 0 0 0 0 0 0 0 0 0 0 (304) GLN315 0 0 0 0 0 0 10 0 0 0 0 0 0 (308) PHE319 0 0 0 0 0 0 41 0 0 0 0 0 0 prot.sequence sefghrtlastpalwasipcprselrldlvlpsaqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficssNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtqvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaqavlfsadlrq >2nof_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURE OF Q315F HUMAN 8-OXOGUANINE GLYCOSYLASE PROXIMAL CROSSLINK TO 8-OXOGUANINE DNA organism=Homo sapiens DNA sequence DC(C21):DG(B10) DA(C22):DT(B9) 8OG(C23):DC(B8) DG(C24):DC(B7) DT(C25):DA(B6) DC(C26):DG(B5) DT(C27):DA(B4) chainA ( 37) PHE45 0 0 2 0 0 0 0 (133) PHE144 0 0 2 0 0 0 0 (136) SER147 0 0 2 0 0 0 0 (137) SER148 0 0 0 7 0 0 0 (138) CYS149 0 22 1 5 0 0 0 (141) ILE152 0 0 1 0 0 0 0 (144) ILE155 0 0 4 0 0 0 0 (192) TYR203 0 0 16 20 0 0 0 (193) ARG204 0 0 7 0 0 0 0 (196) TYR207 0 0 0 0 1 0 0 (238) LYS249 0 0 7 0 0 0 0 (257) ASP268 0 0 5 0 0 0 0 (308) PHE319 0 0 6 0 0 0 0 prot.sequence sefghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficsSCnniaritgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwgpyagwafavlfsadl >2noh_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURE OF CATALYTICALLY INACTIVE Q315A HUMAN 8-OXOGUANINE GLYCOSYLASE COMPLEXED TO 8-OXOGUANINE DNA organism=Homo sapiens DNA sequence DG(B3):DC(C31) DT(B4):DA(C30) DA(B5):DT(C29) DG(B6):DC(C28) DA(B7):DT(C27) DC(B8):DG(C26) DC(B9):8OG(C25) DT(B10):DA(C24) DG(B11):DC(C23) DG(B12):DC(C22) DA(B13):DT(C21) DC(B14):DG(C20) DG(B15):DC(C19) DC(B16):DG(C18) chainA ( 36) PHE45 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (132) PHE144 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (135) SER147 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (137) ASN149 0 0 0 0 0 64 6 7 0 0 0 0 0 0 (138) ASN150 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (139) ASN151 0 0 0 0 0 0 0 5 1 0 0 0 0 0 (140) ILE152 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (142) ARG154 0 0 0 0 0 0 11 13 0 0 0 0 0 0 (143) ILE155 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (191) TYR203 0 0 0 0 0 16 17 0 0 0 0 0 0 0 (192) ARG204 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (237) GLN249 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (241) CYS253 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (245) MET257 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (254) PRO266 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (256) ASP268 0 0 0 0 0 0 13 0 0 0 0 0 0 0 (259) MET271 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (281) PRO293 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (307) PHE319 0 0 0 0 0 0 40 0 0 0 0 0 0 0 prot.sequence efghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficssNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRaryvsasaraileeqgglawlqqlressyeeahkalcilpgvgtqvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaaavlfsadlrq >2noi_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURE OF G42A HUMAN 8-OXOGUANINE GLYCOSYLASE CROSSLINKED TO UNDAMAGED G-CONTAINING DNA organism=Homo sapiens DNA sequence DC(C21):DG(B10) DA(C22):DT(B9) DG(C23):DC(B8) DG(C24):DC(B7) DT(C25):DA(B6) DC(C26):DG(B5) DT(C27):DA(B4) DA(C28):DT(B3) chainA ( 35) ALA42 0 0 3 0 0 0 0 0 (138) SER148 0 0 0 7 0 0 0 0 (139) CYS149 0 10 1 3 0 0 0 0 (142) ILE152 0 0 2 0 0 0 0 0 (144) ARG154 3 22 4 0 0 0 0 0 (145) ILE155 0 0 2 0 0 0 0 0 (193) TYR203 0 0 16 19 0 0 0 0 (194) ARG204 0 0 6 0 0 0 0 0 (197) TYR207 0 0 0 0 1 0 0 0 (239) GLN249 0 0 5 0 0 0 0 0 (243) CYS253 0 0 1 0 0 0 0 0 (258) ASP268 0 0 3 0 0 0 0 0 prot.sequence gsefghrtlastpalwasipcprselrldlvlpsAqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficsSCnnIaRItgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtQvadCiclmaldkpqavpvDvhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwgpyagwaqavlfsadl >2nol_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURE OF CATALYTICALLY INACTIVE HUMAN 8-OXOGUANINE GLYCOSYLASE DISTAL CROSSLINK TO OXOG DNA organism=Homo sapiens DNA sequence DG(C16):DC(B15) DC(C17):DG(B14) DG(C18):DC(B13) DT(C19):DA(B12) DC(C20):DG(B11) DC(C21):DG(B10) DA(C22):DT(B9) 8OG(C23):DC(B8) DG(C24):DC(B7) DT(C25):DA(B6) DC(C26):DG(B5) DT(C27):DA(B4) DA(C28):DT(B3) DC(C29):DG(B2) DC(C30):DG(B1) chainA ( 37) PHE45 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (133) PHE144 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (136) SER147 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (138) ASN149 0 0 0 0 0 0 14 7 31 0 0 0 0 0 0 (139) ASN150 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (140) ASN151 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (141) ILE152 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (143) ARG154 0 0 0 0 0 0 20 11 0 0 0 0 0 0 0 (144) ILE155 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (192) TYR203 0 0 0 0 0 0 0 16 11 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (196) TYR207 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (238) GLN249 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (242) CYS253 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (246) MET257 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (255) PRO266 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (257) ASP268 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 (260) MET271 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (282) PRO293 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (304) GLN315 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (308) PHE319 0 0 0 0 0 0 0 43 0 0 0 0 0 0 0 prot.sequence sefghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficsSNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtqvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpcPqtnkelgnffrslwgpyagwaqavlfsadlrq >2noz_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURE OF Q315F HUMAN 8-OXOGUANINE GLYCOSYLASE DISTAL CROSSLINK TO 8-OXOGUANINE DNA organism=Homo sapiens DNA sequence DT(B3):DA(C28) DA(B4):DT(C27) DG(B5):DC(C26) DA(B6):DT(C25) DC(B7):DG(C24) DC(B8):8OG(C23) DT(B9):DA(C22) DG(B10):DC(C21) DG(B11):DC(C20) DA(B12):DT(C19) DC(B13):DG(C18) chainA ( 35) GLN43 0 0 0 0 0 2 0 0 0 0 0 ( 37) PHE45 0 0 0 0 0 2 0 0 0 0 0 (133) PHE144 0 0 0 0 0 13 0 0 0 0 0 (136) SER147 0 0 0 0 0 2 0 0 0 0 0 (138) ASN149 0 0 0 0 54 5 12 0 0 0 0 (139) ASN150 0 0 0 0 0 0 3 0 0 0 0 (140) ASN151 0 0 0 0 0 0 4 1 0 0 0 (143) ARG154 0 0 0 0 0 8 8 0 0 0 0 (144) ILE155 0 0 0 0 0 1 0 0 0 0 0 (192) TYR203 0 0 0 0 14 16 0 0 0 0 0 (193) ARG204 0 0 0 0 0 12 0 0 0 0 0 (196) TYR207 0 0 0 1 0 0 0 0 0 0 0 (238) LYS249 0 0 0 0 0 12 0 0 0 0 0 (242) CYS253 0 0 0 0 0 3 0 0 0 0 0 (246) MET257 0 0 0 0 0 6 0 0 0 0 0 (255) PRO266 0 0 0 0 0 4 0 0 0 0 0 (257) ASP268 0 0 0 0 0 3 0 0 0 0 0 (302) PHE315 0 0 0 0 0 2 0 0 0 0 0 (306) PHE319 0 0 0 0 0 23 0 0 0 0 0 prot.sequence sefghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficssNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvdvhmwhiaqrdyswhpttakgpcpqtnkelgnffrslwgpyagwafavlfsadl >2np2_A:IHF-like_DNA-binding_proteins; title=HBB-DNA COMPLEX organism=BORRELIA BURGDORFERI DNA sequence DG(D203):DC(C237) DT(D204):DA(C236) DA(D205):DT(C235) DT(D206):DA(C234) DT(D207):DA(C233) DT(D208):DA(C232) DA(D209):DT(C231) DA(D210):DT(C230) DT(D211):DA(C229) DA(D212):DT(C228) DC(D213):DG(C227) DT(D214):DA(C226) DA(D215):DT(C225) DT(D216):DA(C224) DA(D217):DT(C223) DT(D218):DA(C222) DG(D219):DC(C221) DT(D220):DT(C220) DC(D221):DG(C219) DA(D222):DT(C218) DT(D223):DA(C217) DA(D224):DT(C216) DT(D225):DA(C215) DA(D226):DT(C214) DG(D227):DC(C213) DT(D228):DA(C212) DA(D229):DT(C211) DT(D230):DA(C210) DT(D231):DA(C209) DA(D232):DT(C208) DA(D233):DT(C207) DA(D234):DT(C206) DT(D235):DA(C205) DA(D236):DT(C204) DC(D237):DG(C203) chainA ( 53) ARG58 0 0 0 0 0 11 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) PRO77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 32 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 10 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rpkvtksdivdqialniknnnlklekkyirlvidaffeelksnlcsnnviefRsfgtfevrkrkgRlnaRNPQtgeyvkvldhhvayfrpgkdlkervwgik >2np2_AB:IHF-like_DNA-binding_proteins; title=HBB-DNA COMPLEX organism=BORRELIA BURGDORFERI DNA sequence DG(D203):DC(C237) DT(D204):DA(C236) DA(D205):DT(C235) DT(D206):DA(C234) DT(D207):DA(C233) DT(D208):DA(C232) DA(D209):DT(C231) DA(D210):DT(C230) DT(D211):DA(C229) DA(D212):DT(C228) DC(D213):DG(C227) DT(D214):DA(C226) DA(D215):DT(C225) DT(D216):DA(C224) DA(D217):DT(C223) DT(D218):DA(C222) DG(D219):DC(C221) DT(D220):DT(C220) DC(D221):DG(C219) DA(D222):DT(C218) DT(D223):DA(C217) DA(D224):DT(C216) DT(D225):DA(C215) DA(D226):DT(C214) DG(D227):DC(C213) DT(D228):DA(C212) DA(D229):DT(C211) DT(D230):DA(C210) DT(D231):DA(C209) DA(D232):DT(C208) DA(D233):DT(C207) DA(D234):DT(C206) DT(D235):DA(C205) DA(D236):DT(C204) DC(D237):DG(C203) chainA ( 53) ARG58 0 0 0 0 0 11 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) PRO77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 32 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 10 0 0 0 0 0 0 0 0 0 0 0 chainB ( 53) ARG58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 5 6 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN76 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) PRO77 0 0 0 0 0 0 0 0 0 0 0 0 27 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN78 0 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rpkvtksdivdqialniknnnlklekkyirlvidaffeelksnlcsnnviefRsfgtfevrkrkgRlnaRNPQtgeyvkvldhhvayfrpgkdlkervwgik/rpkvtksdivdqialniknnnlklekkyirlvidaffeelksnlcsnnviefRsfgtfevrkrkgRlnaRNPQtgeyvkvldhhvayfrpgkdlkervwgik >2np6_A:DNA_methylase_specificity_domain;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF THE ADENINE-SPECIFIC DNA METHYLTRANSFERASE M.TAQI COMPLEXED WITH THE COFACTOR ANALOG AETA AND A 10 BP DNA CONTAINING AN ABASIC SITE ANALOG AT THE TARGET POSITION organism=Thermus aquaticus DNA sequence DG(C11):DC(B10) DA(C12):DT(B9) DC(C13):DG(B8) DA(C14):DT(B7) DT(C15):3DR(B6) DC(C16):DG(B5) DG(C17):DC(B4) 6MA(C18):DT(B3) DA(C19):DT(B2) DC(C20):DG(B1) chainA ( 97) LYS116 0 0 0 0 0 7 6 0 0 0 ( 98) TYR117 0 0 0 0 0 0 6 7 0 0 (120) LYS139 0 0 0 0 0 0 6 7 0 0 (181) LYS200 0 7 12 24 0 0 0 0 0 0 (249) PHE268 0 0 0 0 0 0 0 4 0 0 (252) ARG271 0 0 0 0 0 3 12 16 11 0 (253) SER272 0 0 0 0 0 0 3 0 0 0 (254) PRO273 0 0 0 0 0 0 1 2 0 0 (255) GLU274 0 0 0 0 0 0 0 0 1 0 (277) ARG296 0 0 2 0 0 0 0 0 0 0 (304) ARG323 0 0 0 0 0 0 0 0 1 0 (316) HIS335 0 0 0 0 0 0 5 0 0 0 (317) THR336 0 0 0 4 3 2 0 0 0 0 (334) ARG353 0 0 0 0 0 1 0 0 0 0 (335) GLU354 0 0 0 0 0 8 0 0 0 0 (374) PRO393 0 0 0 22 2 2 0 0 0 0 (375) HIS394 0 0 0 0 2 12 4 0 0 0 prot.sequence rvetppevvdfmvslaeaprggrvlepacahgpflrafreahgtayrfvgveidpkaldlppwaegiladfllwepgeafdlilgnppygivgeasKYpihvfkavkdlykkafstwkgKynlygaflekavrllkpggvlvfvvpatwlvledfallreflaregktsvyylgevfpqkKvsavvirfqksgkglslwdtqesesgftpilwaeyphwegeiirfeteetrkleisgmplgdlfhirFaaRSPEfkkhpavrkepgpglvpvltgRnlkpgwvdyeknhsglwmpkerakelRdfyatphlvvaHTkgtrvvaawderaypwREefhllpkegvrldpsslvqwlnseamqkhvrtlyrdfvPHltlrmlerlpvrreygfht >2np7_A:DNA_methylase_specificity_domain;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF THE ADENINE-SPECIFIC DNA METHYLTRANSFERASE M.TAQI COMPLEXED WITH THE COFACTOR ANALOG AETA AND A 10 BP DNA CONTAINING AN ABASIC SITE ANALOG AT THE TARGET POSITION AND PYRROLO- DC AT THE TARGET BASE PARTNER POSITION organism=Thermus aquaticus DNA sequence DT(B2):DC(C20) DT(B3):DA(C19) DC(B4):DG(C17) DG(B5):DC(C16) DT(B7):DA(C14) DG(B8):DC(C13) DT(B9):DA(C12) DC(B10):DG(C11) chainA ( 96) LYS116 0 0 6 6 0 0 0 0 ( 97) TYR117 0 0 5 0 0 0 0 0 (119) LYS139 0 5 6 0 0 0 0 0 (180) LYS200 0 0 0 0 7 10 8 0 (248) PHE268 0 4 0 0 0 0 0 0 (251) ARG271 9 12 10 3 0 0 0 0 (252) SER272 0 0 2 0 0 0 0 0 (253) PRO273 0 0 1 0 0 0 0 0 (254) GLU274 1 0 0 0 0 0 0 0 (303) ARG323 1 0 0 0 0 0 0 0 (315) HIS335 0 0 6 0 0 0 0 0 (316) THR336 0 0 0 1 5 0 0 0 (333) ARG353 0 0 0 1 0 0 0 0 (334) GLU354 0 0 0 9 0 0 0 0 (373) PRO393 0 0 0 1 2 0 0 0 (374) HIS394 0 0 5 12 0 0 0 0 prot.sequence vetppevvdfmvslaeaprggrvlepacahgpflrafreahgtayrfvgveidpkaldlppwaegiladfllwepgeafdlilgnppygivgeasKYpihvfkavkdlykkafstwkgKynlygaflekavrllkpggvlvfvvpatwlvledfallreflaregktsvyylgevfpqkKvsavvirfqksgkglslwdtqesesgftpilwaeyphwegeiirfeteetrkleisgmplgdlfhirFaaRSPEfkkhpavrkepgpglvpvltgrnlkpgwvdyeknhsglwmpkerakelRdfyatphlvvaHTkgtrvvaawderaypwREefhllpkegvrldpsslvqwlnseamqkhvrtlyrdfvPHltlrmlerlpvrreygfht >2nqb_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=DROSOPHILA NUCLEOSOME STRUCTURE organism=DROSOPHILA MELANOGASTER DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DG(J271):DC(I22) DA(J273):DT(I21) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS439 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR441 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD ( 1) ARG1228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 16) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/lRDNiqgitkpairrlarrggvkrisgLiyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfgg/aKSRsnraglqfpvgrihrllrkgnyaErvgagapvylaavmeylAaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllpkk/Rkrkesyaiyiytvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aksrsnraglqfpvgRihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllpk/krkesyaiyiytvlkQvhpdtgisskamSimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >2nqj_A:Xylose_isomerase-like; title=CRYSTAL STRUCTURE OF ESCHERICHIA COLI ENDONUCLEASE IV (ENDO IV) E261Q MUTANT BOUND TO DAMAGED DNA organism=Escherichia coli DNA sequence DG(C301):DC(D345) DC(C302):DG(D344) DG(C303):DC(D343) DT(C304):DA(D342) DC(C305):DG(D341) DC(C306):DG(D340) 3DR(C307):DG(D339) DC(C308):DG(D338) DG(C309):DC(D337) DA(C310):DT(D336) DC(C311):DG(D335) DG(C312):DC(D334) DA(C313):DT(D333) DC(C314):DG(D332) DG(C315):DC(D331) chainA ( 35) ASN35 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 ( 36) GLN36 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 37) ARG37 0 0 0 0 0 16 0 38 0 0 0 0 0 0 0 ( 38) GLN38 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 ( 72) TYR72 0 0 0 0 0 64 0 0 0 0 0 0 0 0 0 ( 73) LEU73 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 (230) ARG230 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence mkyigahvsaagglanaairaaeidatafalftkNQRQwraaplttqtidefkaacekyhytsaqilphdsYLinlghpvtealeksrdafidemqrceqlglsllnfhpgshlmqiseedclariaesinialdktqgvtavientagQgsnlgfkfehlaaiidgvedksrvgvcidtchafaagydlrtpaecektfadfartvgfkylrgmhlndakstfgsrvdRhhslgegnighdafrwimqddrfdgiplilqtinpdiwaeeiawlkaqq >2nra_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PI INITIATOR PROTEIN IN COMPLEX WITH ITERON DNA organism=Escherichia coli DNA sequence DG(A1):DC(B45) DA(A2):DT(B44) DA(A3):DT(B43) DC(A4):DG(B42) DA(A5):DT(B41) DT(A6):DA(B40) DG(A7):DC(B39) DA(A8):DT(B38) DG(A9):DC(B37) DA(A10):DT(B36) DG(A11):DC(B35) DC(A12):DG(B34) DT(A13):DA(B33) DT(A14):DA(B32) DA(A15):DT(B31) DG(A16):DC(B30) DT(A17):DA(B29) DA(A18):DT(B28) DC(A19):DG(B27) DG(A20):DC(B26) DT(A21):DA(B25) DC(A22):DG(B24) chainC ( 61) THR69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 63) SER71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 4 0 0 ( 64) LEU72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 ( 66) TYR74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 ( 67) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 (201) TYR217 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 (205) PRO221 0 0 0 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ILE222 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG225 0 0 0 0 0 4 9 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) ASP226 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 (214) LYS230 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vnkktkirhrnelnhtlaqlplpakrvmymalalidskeplergrvfkiraedlaalakiTpSLaYRqlkeggkllgaskislrgddiialakelnseeldlniiewiayspdegylslkftrtiepyissligkknkfttqlltaslrlssqyssslyqlirkhysnfkkknyfiisvdelkeeliaytfdkdgnieykYpdfPIfkRDvlnKaiaeikkkteisfvgftvhekegrkisklkfefvvded >2ntc_A:Origin_of_replication-binding_domain,_RBD-like; title=CRYSTAL STRUCTURE OF SV40 LARGE T ANTIGEN ORIGIN BINDING DOMAIN WITH DNA organism=Simian virus 40 DNA sequence DC(C24):DG(W21) DA(C25):DT(W20) DG(C26):DC(W19) DA(C27):DT(W18) DG(C28):DC(W17) DG(C29):DC(W16) DC(C30):DG(W15) DC(C31):DG(W14) DA(C32):DT(W13) DG(C33):DC(W12) DA(C34):DT(W11) DA(C35):DT(W10) DG(C36):DC(W9) DT(C37):DA(W8) DG(C38):DC(W7) DC(C39):DG(W6) DC(C40):DG(W5) DT(C41):DA(W4) DC(C42):DG(W3) DG(C43):DC(W2) chainA ( 21) SER152 0 0 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ASN153 0 0 0 0 18 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG154 0 13 13 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) THR155 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG204 0 0 0 0 0 0 13 15 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vedpkdfpsellsflshavfSNRTlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphrhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpgglkehdfn >2ntc_AB:Origin_of_replication-binding_domain,_RBD-like; title=CRYSTAL STRUCTURE OF SV40 LARGE T ANTIGEN ORIGIN BINDING DOMAIN WITH DNA organism=Simian virus 40 DNA sequence DC(W2):DG(C43) DG(W3):DC(C42) DA(W4):DT(C41) DG(W5):DC(C40) DG(W6):DC(C39) DC(W7):DG(C38) DA(W8):DT(C37) DC(W9):DG(C36) DT(W10):DA(C35) DT(W11):DA(C34) DC(W12):DG(C33) DT(W13):DA(C32) DG(W14):DC(C31) DG(W15):DC(C30) DC(W16):DG(C29) DC(W17):DG(C28) DT(W18):DA(C27) DC(W19):DG(C26) DT(W20):DA(C25) DG(W21):DC(C24) chainA ( 21) SER152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 3 0 0 ( 22) ASN153 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 18 0 0 0 0 ( 23) ARG154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 13 13 0 ( 24) THR155 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 73) ARG204 0 0 0 0 0 0 0 0 0 0 0 0 15 13 0 0 0 0 0 0 chainB ( 20) SER152 0 3 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ASN153 0 0 0 13 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG154 14 10 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) THR155 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG204 0 0 0 0 0 15 20 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vedpkdfpsellsflshavfSNRTlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphrhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpgglkehdfn/edpkdfpsellsflshavfSNRTlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphRhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpgglkehdfn >2ntz_A:KorB_DNA-binding_domain-like; title=STRUCTURE OF A PARB-DNA COMPLEX REVEALS A DOUBLE B-BOX INTERACTION organism=ENTEROBACTERIA PHAGE P1 DNA sequence DG(E25):DC(U16) DT(E26):DA(U15) DG(E27):DC(U14) DA(E28):DT(U13) DA(E29):DT(U12) DA(E30):DT(U11) DT(E31):DA(U10) DC(E32):DG(U9) DG(E33):DC(U8) DC(E34):DG(U7) DC(E35):DG(U6) DA(E36):DT(U5) DC(E37):DG(U4) DG(E38):DC(U3) DA(E39):DT(U2) chainA (138) LYS287 0 0 0 0 0 0 5 4 6 0 0 0 0 0 0 (139) ASP288 0 0 0 0 0 0 14 7 1 0 0 0 0 0 0 (157) ARG306 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 prot.sequence qtalqhsireiglrlmrmkndgmsqkdiaakeglsqakvtralqaasapeelvalfpvqseltfsdyktlcavgdemgnlefdqliqnispeindilsieemaedevknkilrlitkeaslltdkksvvtelwkfedKDrfarkrvkgrafsyefnRlskelqeeldrmighilrksldkkpk >2nvt_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH GMPCPP organism=? DNA sequence DC(T8):DG(N7) DA(T9):DT(N6) DA(T10):DT(N5) DG(T11):DC(N4) DT(T12):DA(N3) DA(T13):DT(N2) DC(T14):DG(N1) chainA (1090) ASN1110 0 0 0 0 0 0 1 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvakNmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslv >2nvt_AB: title=RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH GMPCPP organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T8):DG(N7) DA(T9):DT(N6) DA(T10):DT(N5) DG(T11):DC(N4) DT(T12):DA(N3) DA(T13):DT(N2) DC(T14):DG(N1) chainA (1090) ASN1110 0 0 0 0 0 0 1 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvakNmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslv/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaAkllfqelmamnitprlytdrsrdf >2nvx_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH 2'-DUTP organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(N1):DG(T14) DT(N2):DA(T13) DG(N3):DC(T12) DC(N4):DG(T11) DT(N5):DA(T10) DT(N6):DA(T9) DA(N7):DT(T8) DT(N8):DA(T7) DC(N9):DG(T6) DG(N10):DC(T5) DG(N11):DC(T4) DT(N12):DA(T3) DA(N13):DT(T2) DG(N14):DC(T1) chainA chainB (164) ALA229 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvraeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkAapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeeytwssllneglveyidaeeeesiliamqpedlepaedvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekksitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpispdskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsr/dqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrelLkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >2nvz_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX WITH UTP, UPDATED 11/2006 organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T1):DG(N14) DT(T2):DA(N13) DA(T3):DT(N12) DC(T4):DG(N11) DC(T5):DG(N10) DG(T6):DC(N9) DA(T7):DT(N8) DT(T8):DA(N7) DA(T9):DT(N6) DA(T10):DT(N5) DG(T11):DC(N4) DC(T12):DG(N3) DA(T13):DT(N2) DG(T14):DC(N1) chainA (142) LYS143 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvpselvsrggcgntqptirkdglklvgswlrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqagrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi >2nvz_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX WITH UTP, UPDATED 11/2006 organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T1):DG(N14) DT(T2):DA(N13) DA(T3):DT(N12) DC(T4):DG(N11) DC(T5):DG(N10) DG(T6):DC(N9) DA(T7):DT(N8) DT(T8):DA(N7) DA(T9):DT(N6) DA(T10):DT(N5) DG(T11):DC(N4) DC(T12):DG(N3) DA(T13):DT(N2) DG(T14):DC(N1) chainA (142) LYS143 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB chainE prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvpselvsrggcgntqptirkdglklvgswlrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqagrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekVliaqersagnivqvfkkaapspishvaeirsalekgsistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaedvdpakrirvsattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrd/qenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdrpqrkmmsfqanpteesiskfpdmgslwveftfvihiqeknfqtgifvtpsamklvpsippatietfneaalvvnithhelvpkhirlssdekreLlkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >2nzd_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE CONTAINING 145 BP OF DNA organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaerVgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >2nzd_D:Histone-fold; title=NUCLEOSOME CORE PARTICLE CONTAINING 145 BP OF DNA organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >2o19_B:Prokaryotic_type_I_DNA_topoisomerase; title=STRUCTURE OF E. COLI TOPOISOMERSAE III IN COMPLEX WITH AN 8-BASE SINGLE STRANDED OLIGONUCLEOTIDE. FROZEN IN GLYCEROL AT PH 5.5 organism=Escherichia coli DNA sequence DC(D1) DG(D2) DC(D3) DA(D4) DA(D5) DC(D6) DT(D7) DT(D8) chainB ( 44) HIS44 0 0 0 0 2 6 0 0 ( 50) GLN50 0 8 0 0 0 0 0 0 ( 51) PRO51 0 6 0 0 0 0 0 0 ( 61) TRP61 42 20 0 0 0 0 0 0 ( 78) ARG78 0 0 0 0 0 0 3 0 (169) ASP169 0 0 1 0 0 0 0 0 (170) TRP170 0 0 6 0 0 0 0 0 (174) ILE174 0 7 4 0 0 0 0 0 (178) ARG178 0 13 0 0 0 0 0 0 (185) ARG185 11 0 0 0 0 0 0 0 (192) VAL192 1 0 0 0 0 0 0 0 (317) GLN317 0 0 0 0 0 0 0 3 (330) ARG330 0 0 0 0 0 0 2 4 (526) ALA526 0 0 0 0 0 0 1 0 (527) THR527 0 0 0 0 2 0 0 0 prot.sequence mrlfiaekpslaraiadvlpkphrkgdgfiecgngqvvtwcigHlleqaQPdaydsryarWnladlpivpekwqlqpRpsvtkqlnvikrflheaseivhagdpdregqllvdevldylqlapekrqqvqrclindlnpqaveraidrlrsnsefvplcvsalaRaraDWlygInmtRaytilgRnagyqgVlsvgrvqtpvlglvvrrdeeienfvakdffevkahivtpaderftaiwqpseacepyqdeegrllhrplaehvvnrisgqpaivtsyndkresesaplpfslsalqieaakrfglsaqnvldicQklyethklitypRsdcrylpeehfagrhavmnaisvhapdllpqpvvdpdirnrcwddkkvdahhaiiptarssainlteneakvynliarqylmqfcpdavfrkcvieldiakgkfvakarflaeagwrtllgskerdeendgtplpvvakgdellcekgevverqtqpprhftdatllsamtgiarfvqdkdlkkilratdglgteATragiiellfkrgfltkkgryihstdagkalfhslpematrpdmtahwesvltqisekqcryqdfmqplvgtlyqlidqakrtpvrqfrgivapgsgaiahhhhh >2o49_A:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE N-TERMINAL CUT DOMAIN OF SATB1 BOUND TO MATRIX ATTACHMENT REGION DNA organism=Homo sapiens DNA sequence DG(B1):DC(C12) DC(B2):DG(C11) DT(B3):DA(C10) DA(B4):DT(C9) DA(B5):DT(C8) DT(B6):DA(C7) DA(B7):DT(C6) DT(B8):DA(C5) DA(B9):DT(C4) DT(B10):DA(C3) DG(B11):DC(C2) DC(B12):DG(C1) chainA ( 32) THR401 0 0 3 1 0 0 0 0 0 0 0 0 ( 33) GLN402 0 0 0 0 2 13 14 0 0 0 0 0 ( 35) LEU404 0 1 2 0 0 0 0 0 0 0 0 0 ( 37) SER406 0 0 0 0 2 4 0 0 0 0 0 0 ( 38) GLU407 0 0 0 4 2 0 0 0 0 0 0 0 prot.sequence evsseiyqwvrdelkragisqavfarvafnrTQgLlSEilrkeedpktasqsllvnlramqnflqlpeaerdriyqdererslr >2o4a_A:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE N-TERMINAL CUT DOMAIN OF SATB1 BOUND TO MATRIX ATTACHMENT REGION DNA organism=Homo sapiens DNA sequence DG(B1):DC(C12) DC(B2):DG(C11) DT(B3):DA(C10) DA(B4):DT(C9) DA(B5):DT(C8) DT(B6):DA(C7) DA(B7):DT(C6) DT(B8):DA(C5) DA(B9):DT(C4) DT(B10):DA(C3) DG(B11):DC(C2) DC(B12):DG(C1) chainA ( 32) THR401 0 0 3 1 0 0 0 0 0 0 0 0 ( 33) GLN402 0 0 0 0 1 10 11 0 0 0 0 0 ( 35) LEU404 0 0 2 0 0 0 0 0 0 0 0 0 ( 37) SER406 0 0 0 0 2 4 0 0 0 0 0 0 ( 38) GLU407 0 0 0 4 3 0 0 0 0 0 0 0 prot.sequence evsseiyqwvrdelkragisqavfarvafnrTQgLlSEilrkeedpktasqsllvnlramqnflqlpeaerdriyqdererslr >2o54_A:Prokaryotic_type_I_DNA_topoisomerase; title=STRUCTURE OF E. COLI TOPOISOMERASE III IN COMPLEX WITH AN 8-BASE SINGLE STRANDED OLIGONUCLEOTIDE. FROZEN IN GLYCEROL AT PH 7.0 organism=Escherichia coli DNA sequence DC(C1) DG(C2) DC(C3) DA(C4) DA(C5) DC(C6) DT(C7) chainA ( 7) GLU7 0 0 0 0 0 9 0 ( 8) LYS8 0 0 0 0 0 6 0 ( 50) GLN50 0 5 0 0 0 0 0 ( 51) PRO51 0 5 0 0 0 0 0 ( 61) TRP61 43 17 0 0 0 0 0 (103) ASP103 0 0 0 0 0 5 0 (169) ASP169 0 0 1 0 0 0 0 (170) TRP170 0 0 7 0 0 0 0 (174) ILE174 0 7 3 0 0 0 0 (177) THR177 0 2 0 0 0 0 0 (178) ARG178 0 13 0 0 0 0 0 (185) ARG185 11 0 0 0 0 0 0 (192) VAL192 1 0 0 0 0 0 0 (317) GLN317 0 0 0 0 0 7 0 (330) ARG330 0 0 0 0 0 26 0 (527) THR527 0 0 0 0 0 0 1 prot.sequence mrlfiaEKpslaraiadvlpkphrkgdgfiecgngqvvtwcighlleqaQPdaydsryarWnladlpivpekwqlqprpsvtkqlnvikrflheaseivhagDpdregqllvdevldylqlapekrqqvqrclindlnpqaveraidrlrsnsefvplcvsalararaDWlygInmTRaytilgRnagyqgVlsvgrvqtpvlglvvrrdeeienfvakdffevkahivtpaderftaiwqpseacepyqdeegrllhrplaehvvnrisgqpaivtsyndkresesaplpfslsalqieaakrfglsaqnvldicQklyethklitypRsdcrylpeehfagrhavmnaisvhapdllpqpvvdpdirnrcwddkkvdahhaiiptarssainlteneakvynliarqylmqfcpdavfrkcvieldiakgkfvakarflaeagwrtllgskerdeendgtplpvvakgdellcekgevverqtqpprhftdatllsamtgiarfvqdkdlkkilratdglgteaTragiiellfkrgfltkkgryihstdagkalfhslpematrpdmtahwesvltqisekqcryqdfmqplvgtlyqlidqakrtpvrqfrgievgsgaiahhhhh >2o59_A:Prokaryotic_type_I_DNA_topoisomerase; title=STRUCTURE OF E. COLI TOPOISOMERASE III IN COMPLEX WITH AN 8-BASE SINGLE STRANDED OLIGONUCLEOTIDE. FROZEN IN GLYCEROL PH 8.0 organism=Escherichia coli DNA sequence DC(C1) DG(C2) DC(C3) DA(C4) DA(C5) DC(C6) DT(C7) chainA ( 50) GLN50 0 5 0 0 0 0 0 ( 51) PRO51 0 7 0 0 0 0 0 ( 61) TRP61 43 19 0 0 0 0 0 (169) ASP169 0 0 1 0 0 0 0 (170) TRP170 0 0 6 0 0 0 0 (174) ILE174 0 8 4 0 0 0 0 (178) ARG178 0 13 0 0 0 0 0 (185) ARG185 11 0 0 0 0 0 0 (192) VAL192 1 0 0 0 0 0 0 (520) THR527 0 0 0 0 2 1 0 prot.sequence mrlfiaekpslaraiadvlpkphrkgdgfiecgngqvvtwcighlleqaQPdaydsryarWnladlpivpekwqlqprpsvtkqlnvikrflheaseivhagdpdregqllvdevldylqlapekrqqvqrclindlnpqaveraidrlrsnsefvplcvsalararaDWlygInmtRaytilgRnagyqgVlsvgrvqtpvlglvvrrdeeienfvakdffevkahivtpaderftaiwqpscepyqdeegrllhrplaehvvnrisgqpaivtsyndkresesaplpfslsalqieaakrfglsaqnvldicqklyethklityprsdcrylpeehfagrhavmnaisvhapdllpqpvvdpdirnrcwddkkvdahhaiiptarssainlteneakvynliarqylmqfcpdavfrkcvieldiakgkfvakarflaeagwrtllgskndgtplpvvakgdellcekgevverqtqpprhftdatllsamtgiarfvqdkdlkkilratdglgteaTragiiellfkrgfltkkgryihstdagkalfhslpematrpdmtahwesvltqisekqcryqdfmqplvgtlyqlidqakrtpvrqfrgigaiahhhhh >2o5c_B:Prokaryotic_type_I_DNA_topoisomerase; title=STRUCTURE OF E. COLI TOPOISOMERASE III IN COMPLEX WITH AN 8-BASE SINGLE STRANDED OLIGONUCLEOTIDE. FROZEN IN GLUCOSE PH 5.5 organism=Escherichia coli DNA sequence DC(D1) DG(D2) DC(D3) DA(D4) DA(D5) DC(D6) DT(D7) chainB ( 7) GLU7 0 0 0 0 0 9 0 ( 8) LYS8 0 0 0 0 0 12 0 ( 50) GLN50 0 3 0 0 0 0 0 ( 51) PRO51 0 6 0 0 0 0 0 ( 61) TRP61 45 19 0 0 0 0 0 (103) ASP103 0 0 0 0 0 6 0 (169) ASP169 0 0 1 0 0 0 0 (170) TRP170 0 0 8 0 0 0 0 (174) ILE174 0 9 3 0 0 0 0 (178) ARG178 0 15 0 0 0 0 0 (185) ARG185 11 0 0 0 0 0 0 (192) VAL192 1 0 0 0 0 0 0 (317) GLN317 0 0 0 0 0 7 0 (330) ARG330 0 0 0 0 0 26 0 (527) THR527 0 0 0 0 0 0 4 prot.sequence mrlfiaEKpslaraiadvlpkphrkgdgfiecgngqvvtwcighlleqaQPdaydsryarWnladlpivpekwqlqprpsvtkqlnvikrflheaseivhagDpdregqllvdevldylqlapekrqqvqrclindlnpqaveraidrlrsnsefvplcvsalararaDWlygInmtRaytilgRnagyqgVlsvgrvqtpvlglvvrrdeeienfvakdffevkahivtpaderftaiwqpseacepyqdeegrllhrplaehvvnrisgqpaivtsyndkresesaplpfslsalqieaakrfglsaqnvldicQklyethklitypRsdcrylpeehfagrhavmnaisvhapdllpqpvvdpdirnrcwddkkvdahhaiiptarssainlteneakvynliarqylmqfcpdavfrkcvieldiakgkfvakarflaeagwrtllgskerdeendgtplpvvakgdellcekgevverqtqpprhftdatllsamtgiarfvqdkdlkkilratdglgteaTragiiellfkrgfltkkgryihstdagkalfhslpematrpdmtahwesvltqisekqcryqdfmqplvgtlyqlidqakrtpvrqfrgivevgsgaiahhhhh >2o5e_B:Prokaryotic_type_I_DNA_topoisomerase; title=STRUCTURE OF E. COLI TOPOISOMERASE III IN COMPLEX WITH AN 8-BASE SINGLE STRANDED OLIGONUCLEOTIDE. FROZEN IN GLUCOSE PH 7.0 organism=Escherichia coli DNA sequence DC(D1) DG(D2) DC(D3) DA(D4) DA(D5) DC(D6) DT(D7) chainB ( 7) GLU7 0 0 0 0 0 9 0 ( 8) LYS8 0 0 0 0 0 9 0 ( 50) GLN50 0 3 0 0 0 0 0 ( 51) PRO51 0 5 0 0 0 0 0 ( 61) TRP61 50 19 0 0 0 0 0 (103) ASP103 0 0 0 0 0 6 0 (169) ASP169 0 0 1 0 0 0 0 (170) TRP170 0 0 8 0 0 0 0 (174) ILE174 0 9 4 0 0 0 0 (178) ARG178 0 14 0 0 0 0 0 (185) ARG185 11 0 0 0 0 0 0 (192) VAL192 1 0 0 0 0 0 0 (317) GLN317 0 0 0 0 0 4 0 (328) TYR328 0 0 0 0 0 1 0 (330) ARG330 0 0 0 0 0 29 0 (527) THR527 0 0 0 0 0 0 2 prot.sequence mrlfiaEKpslaraiadvlpkphrkgdgfiecgngqvvtwcighlleqaQPdaydsryarWnladlpivpekwqlqprpsvtkqlnvikrflheaseivhagDpdregqllvdevldylqlapekrqqvqrclindlnpqaveraidrlrsnsefvplcvsalararaDWlygInmtRaytilgRnagyqgVlsvgrvqtpvlglvvrrdeeienfvakdffevkahivtpaderftaiwqpseacepyqdeegrllhrplaehvvnrisgqpaivtsyndkresesaplpfslsalqieaakrfglsaqnvldicQklyethklitYpRsdcrylpeehfagrhavmnaisvhapdllpqpvvdpdirnrcwddkkvdahhaiiptarssainlteneakvynliarqylmqfcpdavfrkcvieldiakgkfvakarflaeagwrtllgskerdeendgtplpvvakgdellcekgevverqtqpprhftdatllsamtgiarfvqdkdlkkilratdglgteaTragiiellfkrgfltkkgryihstdagkalfhslpematrpdmtahwesvltqisekqcryqdfmqplvgtlyqlidqakrtpvrqfrgivevgsgaiahhhhh >2o5i_CD: title=CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE ELONGATION COMPLEX organism=THERMUS THERMOPHILUS DNA sequence DC(G1):DG(I15) DC(G2):DG(I14) DC(G3):DG(I13) DT(G4):DA(I12) DG(G5):DC(I11) DT(G6):DA(I10) DC(G7):DG(I9) DT(G8):DA(I8) DG(G9):DC(I7) DG(G10):DC(I6) DC(G11):DG(I5) DG(G12):DC(I4) DT(G13):DA(I3) chainC (422) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 16 chainD prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeedkgkgglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglaskr/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdIlsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqlglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkeavea >2o5i_MN: title=CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE ELONGATION COMPLEX organism=THERMUS THERMOPHILUS DNA sequence DC(X1):DG(Z15) DC(X2):DG(Z14) DC(X3):DG(Z13) DT(X4):DA(Z12) DG(X5):DC(Z11) DT(X6):DA(Z10) DC(X7):DG(Z9) DT(X8):DA(Z8) DG(X9):DC(Z7) DG(X10):DC(Z6) DC(X11):DG(Z5) DG(X12):DC(Z4) DT(X13):DA(Z3) chainM (422) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 27 chainN prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeedkgkgglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglaskr/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdIlsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqlglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkeavea >2o5j_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNAP POLYMERASE ELONGATION COMPLEX WITH THE NTP SUBSTRATE ANALOG organism=THERMUS THERMOPHILUS DNA sequence DC(G1):DG(I15) DC(G2):DG(I14) DC(G3):DG(I13) DT(G4):DA(I12) DG(G5):DC(I11) DT(G6):DA(I10) DC(G7):DG(I9) DT(G8):DA(I8) DG(G9):DC(I7) DG(G10):DC(I6) DC(G11):DG(I5) DG(G12):DC(I4) DT(G13):DA(I3) chainC (422) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 19 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeedkgkgglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglaskr >2o5j_CD: title=CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNAP POLYMERASE ELONGATION COMPLEX WITH THE NTP SUBSTRATE ANALOG organism=THERMUS THERMOPHILUS DNA sequence DC(G1):DG(I15) DC(G2):DG(I14) DC(G3):DG(I13) DT(G4):DA(I12) DG(G5):DC(I11) DT(G6):DA(I10) DC(G7):DG(I9) DT(G8):DA(I8) DG(G9):DC(I7) DG(G10):DC(I6) DC(G11):DG(I5) DG(G12):DC(I4) DT(G13):DA(I3) chainC (422) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 19 chainD (1082) ARG1266 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeedkgkgglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglaskr/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmrtfhtggvagaaditqglprvielfeaRrpkakaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkeavea >2o5j_MN: title=CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNAP POLYMERASE ELONGATION COMPLEX WITH THE NTP SUBSTRATE ANALOG organism=THERMUS THERMOPHILUS DNA sequence DA(Z3):DT(X13) DC(Z4):DG(X12) DG(Z5):DC(X11) DC(Z6):DG(X10) DC(Z7):DG(X9) DA(Z8):DT(X8) DG(Z9):DC(X7) DA(Z10):DT(X6) DC(Z11):DG(X5) DA(Z12):DT(X4) DG(Z13):DC(X3) DG(Z14):DC(X2) DG(Z15):DC(X1) chainM (422) ARG422 5 0 0 0 0 0 0 0 0 0 0 0 0 chainN prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeedkgkgglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglaskr/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdIlsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmrtfhtggvagaaditqglprvielfearrpkakaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkeavea >2o61_A:p53-like_transcription_factors;"Winged_helix"_DNA-binding_domain;E_set_domains; title=CRYSTAL STRUCTURE OF NFKB, IRF7, IRF3 BOUND TO THE INTERFERON-B ENHANCER organism=HOMO SAPIENS DNA sequence DC(F2):DG(E35) DA(F3):DT(E34) DG(F4):DC(E33) DA(F5):DT(E32) DG(F6):DC(E31) DG(F7):DC(E30) DA(F8):DT(E29) DA(F9):DT(E28) DT(F10):DA(E27) DT(F11):DA(E26) DT(F12):DA(E25) DC(F13):DG(E24) DC(F14):DG(E23) DC(F15):DG(E22) DA(F16):DT(E21) DC(F17):DG(E20) DT(F18):DA(E19) DT(F19):DA(E18) DT(F20):DA(E17) DC(F21):DG(E16) DA(F22):DT(E15) DC(F23):DG(E14) DT(F24):DA(E13) DT(F25):DA(E12) DC(F26):DG(E11) DT(F27):DA(E10) DC(F28):DG(E9) DC(F29):DG(E8) DC(F30):DG(E7) DT(F31):DA(E6) DT(F32):DA(E5) DT(F33):DA(E4) DC(F34):DG(E3) chainA ( 15) ARG33 0 0 0 0 17 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG35 0 0 0 2 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) TYR36 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG41 0 0 8 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ARG187 0 0 0 0 0 2 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) LYS218 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) THR1093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (357) ASN1094 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) ARG1096 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 (360) CYS1097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (363) ARG1100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (364) SER1101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (427) HIS2040 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 (429) LEU2042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 (465) ARG2078 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 5 0 0 0 0 0 (466) ASN2079 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (468) ARG2081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 (469) SER2082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 (473) ARG2086 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 20 5 0 0 0 0 0 0 0 prot.sequence gyveiieqpkqrgmRfRYkCEgRsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgfyeaelcpdrcihsfqnlgiqcvkkrdleqaisqriqtnnnpfqvpieeqrgdydlnavrlcfqvtvrdpsgrplrlppvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdKvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpdaaprvlfgewllgeissgcyeglqwldeartcfrvpwkHfarkdlseadarifkawavargrwppssrpppeaetaeragwkTNfRCalRStrrfvmlrdnsgdpadqhkvyalsgslssdslpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSalnRkeglrlaedrskdphdphkiyefvn >2o61_AB:p53-like_transcription_factors;E_set_domains;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF NFKB, IRF7, IRF3 BOUND TO THE INTERFERON-B ENHANCER organism=HOMO SAPIENS DNA sequence DG(E3):DC(F34) DA(E4):DT(F33) DA(E5):DT(F32) DA(E6):DT(F31) DG(E7):DC(F30) DG(E8):DC(F29) DG(E9):DC(F28) DA(E10):DT(F27) DG(E11):DC(F26) DA(E12):DT(F25) DA(E13):DT(F24) DG(E14):DC(F23) DT(E15):DA(F22) DG(E16):DC(F21) DA(E17):DT(F20) DA(E18):DT(F19) DA(E19):DT(F18) DG(E20):DC(F17) DT(E21):DA(F16) DG(E22):DC(F15) DG(E23):DC(F14) DG(E24):DC(F13) DA(E25):DT(F12) DA(E26):DT(F11) DA(E27):DT(F10) DT(E28):DA(F9) DT(E29):DA(F8) DC(E30):DG(F7) DC(E31):DG(F6) DT(E32):DA(F5) DC(E33):DG(F4) DT(E34):DA(F3) DG(E35):DC(F2) chainA ( 15) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 17 0 0 0 0 ( 17) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 2 0 0 0 ( 18) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 ( 23) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 8 0 0 (169) ARG187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 2 0 0 0 0 0 (200) LYS218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (356) THR1093 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ASN1094 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) ARG1096 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (360) CYS1097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (363) ARG1100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (364) SER1101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (427) HIS2040 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) LEU2042 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (465) ARG2078 0 0 0 0 0 5 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (466) ASN2079 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG2081 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) SER2082 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (473) ARG2086 0 0 0 0 0 0 0 5 20 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 18) ARG54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 2 0 0 0 0 0 0 0 0 0 0 ( 20) ARG56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 1 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 ( 23) CYS59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 24) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 ( 28) HIS64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gyveiieqpkqrgmRfRYkCEgRsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgfyeaelcpdrcihsfqnlgiqcvkkrdleqaisqriqtnnnpfqvpieeqrgdydlnavrlcfqvtvrdpsgrplrlppvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdKvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpdaaprvlfgewllgeissgcyeglqwldeartcfrvpwkHfarkdlseadarifkawavargrwppssrpppeaetaeragwkTNfRCalRStrrfvmlrdnsgdpadqhkvyalsgslssdslpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSalnRkeglrlaedrskdphdphkiyefvn/mdgpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgictvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhpdlaylqaegggdrqlgdrekelirqaalqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydskapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdinitkpasvfvqlrrksdletsepkpflyype >2o6g_EFGH:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF IRF-3 BOUND TO THE INTERFERON-B ENHANCER organism=Homo sapiens DNA sequence DA(D2):DT(C57) DA(D3):DT(C56) DA(D4):DT(C55) DT(D5):DA(C54) DG(D6):DC(C53) DA(D7):DT(C52) DC(D8):DG(C51) DA(D9):DT(C50) DT(D10):DA(C49) DA(D11):DT(C48) DG(D12):DC(C47) DG(D13):DC(C46) DG(D14):DC(C45) DA(D15):DT(C44) DA(D16):DT(C43) DA(D17):DT(C42) DC(D18):DG(C41) DT(D19):DA(C40) DG(D20):DC(C39) DA(D21):DT(C38) DA(D22):DT(C37) DA(D23):DT(C36) DG(D24):DC(C35) DG(D25):DC(C34) DG(D26):DC(C33) DA(D27):DT(C32) DA(D28):DT(C31) DA(D29):DT(C30) DG(D30):DC(C29) DT(D31):DA(C28) DG(D32):DC(C27) DA(D33):DT(C26) DA(D34):DT(C25) DA(D35):DT(C24) DG(D36):DC(C23) DT(D37):DA(C22) DG(D38):DC(C21) DG(D39):DC(C20) DG(D40):DC(C19) DA(D41):DT(C18) DA(D42):DT(C17) DA(D43):DT(C16) DT(D44):DA(C15) DT(D45):DA(C14) DC(D46):DG(C13) DC(D47):DG(C12) DT(D48):DA(C11) DC(D49):DG(C10) DT(D50):DA(C9) DG(D51):DC(C8) DA(D52):DT(C7) DA(D53):DT(C6) DT(D54):DA(C5) DA(D55):DT(C4) DG(D56):DC(C3) DA(D57):DT(C2) chainE ( 40) LEU42 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG78 0 0 0 0 0 0 0 0 0 0 1 19 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ARG81 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 37) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LEU42 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 38) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LEU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ALA83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 37) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LEU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ALA83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpkprilpwlvsqldlgqlegvawvnksrtrfripwkhgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSalnRkeglrlaedrskdphdphkiyefvns/pkprilpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSalnRkeglrlaedrskdphdphkiyefvn/tpkprilpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSAlnRkeglrlaedrskdphdphkiyefvns/pkprilpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSAlnRkeglrlaedrskdphdphkiyefvn >2o6g_H:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF IRF-3 BOUND TO THE INTERFERON-B ENHANCER organism=Homo sapiens DNA sequence DT(C2):DA(D57) DC(C3):DG(D56) DT(C4):DA(D55) DA(C5):DT(D54) DT(C6):DA(D53) DT(C7):DA(D52) DC(C8):DG(D51) DA(C9):DT(D50) DG(C10):DC(D49) DA(C11):DT(D48) DG(C12):DC(D47) DG(C13):DC(D46) DA(C14):DT(D45) DA(C15):DT(D44) DT(C16):DA(D43) DT(C17):DA(D42) DT(C18):DA(D41) DC(C19):DG(D40) DC(C20):DG(D39) DC(C21):DG(D38) DA(C22):DT(D37) DC(C23):DG(D36) DT(C24):DA(D35) DT(C25):DA(D34) DT(C26):DA(D33) DC(C27):DG(D32) DA(C28):DT(D31) DC(C29):DG(D30) DT(C30):DA(D29) DT(C31):DA(D28) DT(C32):DA(D27) DC(C33):DG(D26) DC(C34):DG(D25) DC(C35):DG(D24) DT(C36):DA(D23) DT(C37):DA(D22) DT(C38):DA(D21) DC(C39):DG(D20) DA(C40):DT(D19) DG(C41):DC(D18) DT(C42):DA(D17) DT(C43):DA(D16) DT(C44):DA(D15) DC(C45):DG(D14) DC(C46):DG(D13) DC(C47):DG(D12) DT(C48):DA(D11) DA(C49):DT(D10) DT(C50):DA(D9) DG(C51):DC(D8) DT(C52):DA(D7) DC(C53):DG(D6) DA(C54):DT(D5) DT(C55):DA(D4) DT(C56):DA(D3) DT(C57):DA(D2) chainH ( 37) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LEU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ALA83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pkprilpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSAlnRkeglrlaedrskdphdphkiyefvn >2o6m_AB:His-Me_finger_endonucleases; title=H98Q MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED WITH DNA organism=Physarum polycephalum DNA sequence DT(C402):DA(D521) DG(C403):DC(D520) DA(C404):DT(D519) DC(C405):DG(D518) DT(C406):DA(D517) DC(C407):DG(D516) DT(C408):DA(D515) DC(C409):DG(D514) DT(C410):DA(D513) DT(C411):DA(D512) DA(C412):DT(D511) DA(C413):DT(D510) DG(C414):DC(D509) DA(C415):DT(D508) DG(C416):DC(D507) DA(C417):DT(D506) DG(C418):DC(D505) DT(C419):DA(D504) DC(C420):DG(D503) DA(C421):DT(D502) chainA ( 54) ALA55 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN57 0 0 0 0 4 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS65 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR67 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL72 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 11 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) LEU116 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 (119) LYS120 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 chainB ( 54) ALA255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 56) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 6 0 0 0 0 ( 60) ARG261 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 ( 62) GLN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 0 0 0 0 ( 64) LYS265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 ( 66) THR267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 71) VAL272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 12 0 0 0 (115) LEU316 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 (119) LYS320 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasqlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv/altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasqlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >2o6m_B:His-Me_finger_endonucleases; title=H98Q MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED WITH DNA organism=Physarum polycephalum DNA sequence DT(C402):DA(D521) DG(C403):DC(D520) DA(C404):DT(D519) DC(C405):DG(D518) DT(C406):DA(D517) DC(C407):DG(D516) DT(C408):DA(D515) DC(C409):DG(D514) DT(C410):DA(D513) DT(C411):DA(D512) DA(C412):DT(D511) DA(C413):DT(D510) DG(C414):DC(D509) DA(C415):DT(D508) DG(C416):DC(D507) DA(C417):DT(D506) DG(C418):DC(D505) DT(C419):DA(D504) DC(C420):DG(D503) DA(C421):DT(D502) chainB ( 54) ALA255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 56) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 6 0 0 0 0 ( 60) ARG261 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 ( 62) GLN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 0 0 0 0 ( 64) LYS265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 ( 66) THR267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 71) VAL272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 12 0 0 0 (115) LEU316 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 (119) LYS320 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 prot.sequence altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctasqlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv >2o8b_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_repair_protein_MutS,_domain_I;DNA_repair_protein_MutS,_domain_III; title=HUMAN MUTSALPHA (MSH2/MSH6) BOUND TO ADP AND A G T MISPAIR organism=HOMO SAPIENS DNA sequence DA(E2):DT(F29) DA(E3):DT(F28) DC(E4):DG(F27) DC(E5):DG(F26) DG(E6):DC(F25) DC(E7):DG(F24) DG(E8):DT(F23) DC(E9):DG(F22) DG(E10):DC(F21) DC(E11):DG(F20) DT(E12):DA(F19) DA(E13):DT(F18) DG(E14):DC(F17) DG(E15):DC(F16) chainA chainB ( 68) VAL429 0 0 0 0 0 0 2 1 0 0 0 0 0 0 ( 70) LYS431 0 0 0 0 0 22 0 0 0 0 0 0 0 0 ( 71) PHE432 0 0 0 0 0 46 56 0 0 0 0 0 0 0 ( 73) GLU434 0 0 0 0 0 0 13 1 0 0 0 0 0 0 ( 91) MET452 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (101) PRO462 0 0 0 0 0 22 0 0 0 0 0 0 0 0 prot.sequence mavqpketlqlesaaevgfvrffqgmpekptttvrlfdrgdfytahgedallaarevfktqgvikymgpagaknlqsvvlskmnfesfvkdlllvrqyrvevyknragskendwylaykaspgnlsqfedilfgnnigvvgvkmsavdgqrqvgvgyvdsiqrklglcefpdndqfsnlealliqigpkecvlpggetagdmgklrqiiqrggiliterkkadfstkdiyqdlnrgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfqgstgsqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssaqfgyyfrvtckeekvlrnnknfstvdiqkngvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqdeiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvgstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleefq/ptvwyhetlewlkeekrrdehrrrpdhpdfdastlyvpedflnsctpgmrkwwqiksqnfdlvicykVgKFyElyhmdaligvselglvfMkgnwahsgfPeiafgrysdslvqkgykvarveqtetpemmearcrkmahiskydrvvrreicriitkgtqtysvlegdpsenyskyllslkekeedsshtraygvcfvdtslgkffigqfsddrhcsrfrtlvahyppvqvlfekgnlsketktilksslscslqeglipgsqfwdasktlrtlleeeyfreklsdgivmlpqvlkgmtsesdsigltpgekselalsalggcvfylkkclidqellsmanfeeyipldsdtvskayqrmvldavtlnnleiflngtngstegtllervdtchtpfgkrllkqwlcaplcnhyaindrldaiedlmvvpdkisevvellkklpdlerllskihnvgsplksqnhpdsraimyeettyskkkiidflsalegfkvmckiigimeevadgfkskilkqvislqtknpegrfpdltvelnrwdtafdhekarktglitpkagfsdydqaladireneqslleylekqrnrigcrtivywgigrnryqleipenfttrnlpeyelkstkkgckrywtktiekklanlinaeerrdvslkdcmrrlfynfdknykdwqsaveciavldvllclanysrggdgpmcrpvillpedtppflelkgsrhpcgddfipndiligceeeeqkaycvlvtgpnmggkstlmrqagllavmaqmgcyvpaevcrltpidrvftrlgstffvelsetasilmhatahslvlvdelgrgtatfdgtaianavvkelaetikcrtlfsthyhslvedysqnvavrlghmacmtflykfikgacpksygfnaarlanlpeeviqkghrkarefekmnqslrlfre >2o8b_B:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_repair_protein_MutS,_domain_I;DNA_repair_protein_MutS,_domain_III; title=HUMAN MUTSALPHA (MSH2/MSH6) BOUND TO ADP AND A G T MISPAIR organism=HOMO SAPIENS DNA sequence DA(E2):DT(F29) DA(E3):DT(F28) DC(E4):DG(F27) DC(E5):DG(F26) DG(E6):DC(F25) DC(E7):DG(F24) DG(E8):DT(F23) DC(E9):DG(F22) DG(E10):DC(F21) DC(E11):DG(F20) DT(E12):DA(F19) DA(E13):DT(F18) DG(E14):DC(F17) DG(E15):DC(F16) chainB ( 68) VAL429 0 0 0 0 0 0 2 1 0 0 0 0 0 0 ( 70) LYS431 0 0 0 0 0 22 0 0 0 0 0 0 0 0 ( 71) PHE432 0 0 0 0 0 46 56 0 0 0 0 0 0 0 ( 73) GLU434 0 0 0 0 0 0 13 1 0 0 0 0 0 0 ( 91) MET452 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (101) PRO462 0 0 0 0 0 22 0 0 0 0 0 0 0 0 prot.sequence ptvwyhetlewlkeekrrdehrrrpdhpdfdastlyvpedflnsctpgmrkwwqiksqnfdlvicykVgKFyElyhmdaligvselglvfMkgnwahsgfPeiafgrysdslvqkgykvarveqtetpemmearcrkmahiskydrvvrreicriitkgtqtysvlegdpsenyskyllslkekeedsshtraygvcfvdtslgkffigqfsddrhcsrfrtlvahyppvqvlfekgnlsketktilksslscslqeglipgsqfwdasktlrtlleeeyfreklsdgivmlpqvlkgmtsesdsigltpgekselalsalggcvfylkkclidqellsmanfeeyipldsdtvskayqrmvldavtlnnleiflngtngstegtllervdtchtpfgkrllkqwlcaplcnhyaindrldaiedlmvvpdkisevvellkklpdlerllskihnvgsplksqnhpdsraimyeettyskkkiidflsalegfkvmckiigimeevadgfkskilkqvislqtknpegrfpdltvelnrwdtafdhekarktglitpkagfsdydqaladireneqslleylekqrnrigcrtivywgigrnryqleipenfttrnlpeyelkstkkgckrywtktiekklanlinaeerrdvslkdcmrrlfynfdknykdwqsaveciavldvllclanysrggdgpmcrpvillpedtppflelkgsrhpcgddfipndiligceeeeqkaycvlvtgpnmggkstlmrqagllavmaqmgcyvpaevcrltpidrvftrlgstffvelsetasilmhatahslvlvdelgrgtatfdgtaianavvkelaetikcrtlfsthyhslvedysqnvavrlghmacmtflykfikgacpksygfnaarlanlpeeviqkghrkarefekmnqslrlfre >2o8c_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_repair_protein_MutS,_domain_I;DNA_repair_protein_MutS,_domain_III; title=HUMAN MUTSALPHA (MSH2/MSH6) BOUND TO ADP AND AN O6-METHYL-GUANINE T MISPAIR organism=HOMO SAPIENS DNA sequence DC(F16):DG(E15) DC(F17):DG(E14) DT(F18):DA(E13) DA(F19):DT(E12) DG(F20):DC(E11) DC(F21):DG(E10) DG(F22):DC(E9) DT(F23):6OG(E8) DG(F24):DC(E7) DC(F25):DG(E6) DG(F26):DC(E5) DG(F27):DC(E4) DT(F28):DA(E3) DT(F29):DA(E2) DC(F30):DG(E1) chainA chainB ( 68) VAL429 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 70) LYS431 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 71) PHE432 0 0 0 0 0 0 0 108 21 0 0 0 0 0 0 ( 73) GLU434 0 0 0 0 0 0 1 24 0 0 0 0 0 0 0 ( 91) MET452 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 (101) PRO462 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 prot.sequence mavqpketlqlesaaevgfvrffqgmpekptttvrlfdrgdfytahgedallaarevfktqgvikymgpagaknlqsvvlskmnfesfvkdlllvrqyrvevyknragskendwylaykaspgnlsqfedilfgnnigvvgvkmsavdqrqvgvgyvdsiqrklglcefpdndqfsnlealliqigpkecvlpggetagdmgklrqiiqrggiliterkkadfstkdiyqdlnrgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfqgstgsqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssaqfgyyfrvtckeekvlrnnknfstvdiqkngvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqdeiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvgstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleefq/ptvwyhetlewlkeekrrdehrrrpdhpdfdastlyvpedflnsctpgmrkwwqiksqnfdlvicykVgKFyElyhmdaligvselglvfMkgnwahsgfPeiafgrysdslvqkgykvarveqtetpemmearcrkmahiskydrvvrreicriitkgtqtysvlegdpsenyskyllslkekeedsshtraygvcfvdtslgkffigqfsddrhcsrfrtlvahyppvqvlfekgnlsketktilksslscslqeglipgsqfwdasktlrtlleeeyfreklsdgivmlpqvlkgmtsesdsigltpgekselalsalggcvfylkkclidqellsmanfeeyipldsdtvskayqrmvldavtlnnleiflngtngstegtllervdtchtpfgkrllkqwlcaplcnhyaindrldaiedlmvvpdkisevvellkklpdlerllskihnvgsplksqnhpdsraimyeettyskkkiidflsalegfkvmckiigimeevadgfkskilkqvislqtknpegrfpdltvelnrwdtafdhekarktglitpkagfsdydqaladireneqslleylekqrnrigcrtivywgigrnryqleipenfttrnlpeyelkstkkgckrywtktiekklanlinaeerrdvslkdcmrrlfynfdknykdwqsaveciavldvllclanysrggdgpmcrpvillpedtppflelkgsrhpcgddfipndiligceeeeqenkaycvlvtgpnmggkstlmrqagllavmaqmgcyvpaevcrltpidrvftrlgstffvelsetasilmhatahslvlvdelgrgtatfdgtaianavvkelaetikcrtlfsthyhslvedysqnvavrlghmacmtflykfikgacpksygfnaarlanlpeeviqkghrkarefekmnqslrlfre >2o8d_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_repair_protein_MutS,_domain_I;DNA_repair_protein_MutS,_domain_III; title=HUMAN MUTSALPHA (MSH2/MSH6) BOUND TO ADP AND A G DU MISPAIR organism=HOMO SAPIENS DNA sequence DG(E1):DC(F30) DA(E2):DT(F29) DA(E3):DT(F28) DC(E4):DG(F27) DC(E5):DG(F26) DG(E6):DC(F25) DC(E7):DG(F24) DG(E8):DU(F23) DC(E9):DG(F22) DG(E10):DC(F21) DC(E11):DG(F20) DT(E12):DA(F19) DA(E13):DT(F18) DG(E14):DC(F17) DG(E15):DC(F16) chainA chainB ( 68) VAL429 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 ( 70) LYS431 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 ( 71) PHE432 0 0 0 0 0 0 40 53 0 0 0 0 0 0 0 ( 73) GLU434 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 ( 91) MET452 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (101) PRO462 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 prot.sequence mavqpketlqlesaaevgfvrffqgmpekptttvrlfdrgdfytahgedallaarevfktqgvikymgpagaknlqsvvlskmnfesfvkdlllvrqyrvevyknragskendwylaykaspgnlsqfedilfgnnigvvgvkmsavdqrqvgvgyvdsiqrklglcefpdndqfsnlealliqigpkecvlpggetagdmgklrqiiqrggiliterkkadfstkdiyqdlnrgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfqgstgsqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssaqfgyyfrvtckeekvlrnnknfstvdiqkngvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqdeiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvgstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleefq/ptvwyhetlewlkeekrrdehrrrpdhpdfdastlyvpedflnsctpgmrkwwqiksqnfdlvicykVgKFyElyhmdaligvselglvfMkgnwahsgfPeiafgrysdslvqkgykvarveqtetpemmearcrkmahiskydrvvrreicriitkgtqtysvlegdpsenyskyllslkekeedsshtraygvcfvdtslgkffigqfsddrhcsrfrtlvahyppvqvlfekgnlsketktilksslscslqeglipgsqfwdasktlrtlleeeyfreklsdgivmlpqvlkgmtsesdsigltpgekselalsalggcvfylkkclidqellsmanfeeyipldsdtvskayqrmvldavtlnnleiflngtngstegtllervdtchtpfgkrllkqwlcaplcnhyaindrldaiedlmvvpdkisevvellkklpdlerllskihnvgsplksqnhpdsraimyeettyskkkiidflsalegfkvmckiigimeevadgfkskilkqvislqtknpegrfpdltvelnrwdtafdhekarktglitpkagfsdydqaladireneqslleylekqrnrigcrtivywgigrnryqleipenfttrnlpeyelkstkkgckrywtktiekklanlinaeerrdvslkdcmrrlfynfdknykdwqsaveciavldvllclanysrggdgpmcrpvillpedtppflelkgsrhpcgddfipndiligceeeeqenkaycvlvtgpnmggkstlmrqagllavmaqmgcyvpaevcrltpidrvftrlgstffvelsetasilmhatahslvlvdelgrgtatfdgtaianavvkelaetikcrtlfsthyhslvedysqnvavrlghmacmtflykfikgacpksygfnaarlanlpeeviqkghrkarefekmnqslrlfre >2o8d_B:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MUTSALPHA (MSH2/MSH6) BOUND TO ADP AND A G DU MISPAIR organism=HOMO SAPIENS DNA sequence DG(E1):DC(F30) DA(E2):DT(F29) DA(E3):DT(F28) DC(E4):DG(F27) DC(E5):DG(F26) DG(E6):DC(F25) DC(E7):DG(F24) DG(E8):DU(F23) DC(E9):DG(F22) DG(E10):DC(F21) DC(E11):DG(F20) DT(E12):DA(F19) DA(E13):DT(F18) DG(E14):DC(F17) DG(E15):DC(F16) chainB ( 68) VAL429 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 ( 70) LYS431 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 ( 71) PHE432 0 0 0 0 0 0 40 53 0 0 0 0 0 0 0 ( 73) GLU434 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 ( 91) MET452 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (101) PRO462 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 prot.sequence ptvwyhetlewlkeekrrdehrrrpdhpdfdastlyvpedflnsctpgmrkwwqiksqnfdlvicykVgKFyElyhmdaligvselglvfMkgnwahsgfPeiafgrysdslvqkgykvarveqtetpemmearcrkmahiskydrvvrreicriitkgtqtysvlegdpsenyskyllslkekeedsshtraygvcfvdtslgkffigqfsddrhcsrfrtlvahyppvqvlfekgnlsketktilksslscslqeglipgsqfwdasktlrtlleeeyfreklsdgivmlpqvlkgmtsesdsigltpgekselalsalggcvfylkkclidqellsmanfeeyipldsdtvskayqrmvldavtlnnleiflngtngstegtllervdtchtpfgkrllkqwlcaplcnhyaindrldaiedlmvvpdkisevvellkklpdlerllskihnvgsplksqnhpdsraimyeettyskkkiidflsalegfkvmckiigimeevadgfkskilkqvislqtknpegrfpdltvelnrwdtafdhekarktglitpkagfsdydqaladireneqslleylekqrnrigcrtivywgigrnryqleipenfttrnlpeyelkstkkgckrywtktiekklanlinaeerrdvslkdcmrrlfynfdknykdwqsaveciavldvllclanysrggdgpmcrpvillpedtppflelkgsrhpcgddfipndiligceeeeqenkaycvlvtgpnmggkstlmrqagllavmaqmgcyvpaevcrltpidrvftrlgstffvelsetasilmhatahslvlvdelgrgtatfdgtaianavvkelaetikcrtlfsthyhslvedysqnvavrlghmacmtflykfikgacpksygfnaarlanlpeeviqkghrkarefekmnqslrlfre >2o8e_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_repair_protein_MutS,_domain_I;DNA_repair_protein_MutS,_domain_III; title=HUMAN MUTSALPHA (MSH2/MSH6) BOUND TO A G T MISPAIR, WITH ADP BOUND TO MSH2 ONLY organism=HOMO SAPIENS DNA sequence DG(E1):DC(F30) DA(E2):DT(F29) DA(E3):DT(F28) DC(E4):DG(F27) DC(E5):DG(F26) DG(E6):DC(F25) DC(E7):DG(F24) DG(E8):DT(F23) DG(E9):DC(F22) DG(E10):DC(F21) DC(E11):DG(F20) DT(E12):DA(F19) DA(E13):DT(F18) DG(E14):DC(F17) DG(E15):DC(F16) chainA chainB ( 68) VAL429 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 ( 70) LYS431 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 ( 71) PHE432 0 0 0 0 0 0 24 58 0 0 0 0 0 0 0 ( 73) GLU434 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 ( 91) MET452 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (101) PRO462 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 prot.sequence mavqpketlqlesaaevgfvrffqgmpekptttvrlfdrgdaytahgedallaarevfktqgvikymgpagaknlqsvvlskmnfesfvkdlllvrqyrvevyknragskendwylaykaspgnlsqfedilfgnnigvvgvkmqrqvgvgyvdsiqrklglcefpdndqfsnlealliqigpkecvlpggetagdmgklrqiiqrggiliterkkadfstkdiyqdlnrgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfqtgsqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssaqfgyyfrvtckeekvlrnnknfstvdiqkngvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqdeiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvgstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleefq/ptvwyhetlewlkeekrrdehrrrpdhpdfdastlyvpedflnsctpgmrkwwqiksqnfdlvicykVgKFyElyhmdaligvselglvfMkgnwahsgfPeiafgrysdslvqkgykvarveqtetpemmearcrkmahiskydrvvrreicriitkgtqtysvlegdpsenyskyllslkekeedsshtraygvcfvdtslgkffigqfsddrhcsrfrtlvahyppvqvlfekgnlsketktilksslscslqeglipgsqfwdasktlrtlleeeyfreklsdgivmlpqvlkgmtsesdsigltpgekselalsalggcvfylkkclidqellsmanfeeyipldsdtvskayqrmvldavtlnnleiflngtngstegtllervdtchtpfgkrllkqwlcaplcnhyaindrldaiedlmvvpdkisevvellkklpdlerllskihnvgsplksqnhpdsraimyeettyskkkiidflsalegfkvmckiigimeevadgfkskilkqvislqtknpegrfpdltvelnrwdtafdhekarktglitpkagfsdydqaladireneqslleylekqrnrigcrtivywgigrnryqleipenfttrnlpeyelkstkkgckrywtktiekklanlinaeerrdvslkdcmrrlfynfdknykdwqsaveciavldvllclanysrggdgpmcrpvillpedtppflelkgsrhpcitfgddfipndiligceeeeqegkaycvlvtgpnmggkstlmrqagllavmaqmgcyvpaevcrltpidrvftrlgstffvelsetasilmhatahslvlvdelgrgtatfdgtaianavvkelaetikcrtlfsthyhslvedysqnvavrlghmacmtflykfikgacpksygfnaarlanlpeeviqkghrkarefekmnqslrlfre >2o8e_B:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MUTSALPHA (MSH2/MSH6) BOUND TO A G T MISPAIR, WITH ADP BOUND TO MSH2 ONLY organism=HOMO SAPIENS DNA sequence DG(E1):DC(F30) DA(E2):DT(F29) DA(E3):DT(F28) DC(E4):DG(F27) DC(E5):DG(F26) DG(E6):DC(F25) DC(E7):DG(F24) DG(E8):DT(F23) DG(E9):DC(F22) DG(E10):DC(F21) DC(E11):DG(F20) DT(E12):DA(F19) DA(E13):DT(F18) DG(E14):DC(F17) DG(E15):DC(F16) chainB ( 68) VAL429 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 ( 70) LYS431 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 ( 71) PHE432 0 0 0 0 0 0 24 58 0 0 0 0 0 0 0 ( 73) GLU434 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 ( 91) MET452 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (101) PRO462 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 prot.sequence ptvwyhetlewlkeekrrdehrrrpdhpdfdastlyvpedflnsctpgmrkwwqiksqnfdlvicykVgKFyElyhmdaligvselglvfMkgnwahsgfPeiafgrysdslvqkgykvarveqtetpemmearcrkmahiskydrvvrreicriitkgtqtysvlegdpsenyskyllslkekeedsshtraygvcfvdtslgkffigqfsddrhcsrfrtlvahyppvqvlfekgnlsketktilksslscslqeglipgsqfwdasktlrtlleeeyfreklsdgivmlpqvlkgmtsesdsigltpgekselalsalggcvfylkkclidqellsmanfeeyipldsdtvskayqrmvldavtlnnleiflngtngstegtllervdtchtpfgkrllkqwlcaplcnhyaindrldaiedlmvvpdkisevvellkklpdlerllskihnvgsplksqnhpdsraimyeettyskkkiidflsalegfkvmckiigimeevadgfkskilkqvislqtknpegrfpdltvelnrwdtafdhekarktglitpkagfsdydqaladireneqslleylekqrnrigcrtivywgigrnryqleipenfttrnlpeyelkstkkgckrywtktiekklanlinaeerrdvslkdcmrrlfynfdknykdwqsaveciavldvllclanysrggdgpmcrpvillpedtppflelkgsrhpcitfgddfipndiligceeeeqegkaycvlvtgpnmggkstlmrqagllavmaqmgcyvpaevcrltpidrvftrlgstffvelsetasilmhatahslvlvdelgrgtatfdgtaianavvkelaetikcrtlfsthyhslvedysqnvavrlghmacmtflykfikgacpksygfnaarlanlpeeviqkghrkarefekmnqslrlfre >2o8f_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_repair_protein_MutS,_domain_I;DNA_repair_protein_MutS,_domain_III; title=HUMAN MUTSALPHA (MSH2/MSH6) BOUND TO DNA WITH A SINGLE BASE T INSERT organism=HOMO SAPIENS DNA sequence DG(E1):DC(F32) DA(E2):DT(F31) DC(E3):DG(F30) DG(E4):DC(F29) DG(E5):DC(F28) DC(E6):DG(F27) DC(E7):DG(F26) DG(E8):DC(F25) DC(E9):DG(F24) DC(E10):DG(F22) DG(E11):DC(F21) DC(E12):DG(F20) DT(E13):DA(F19) DA(E14):DT(F18) DG(E15):DC(F17) DC(E16):DG(F16) DG(E17):DC(F15) chainA chainB ( 70) LYS431 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 71) PHE432 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 (101) PRO462 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 prot.sequence mavqpketlqlesaaevgfvrffqgmpekptttvrlfdrgdfytahgedallaarevfktqgvikymgpagaknlqsvvlskmnfesfvkdlllvrqyrvevyknragskendwylaykaspgnlsqfedilfgnnigvvgvkmsavdqrqvgvgyvdsiqrklglcefpdndqfsnlealliqigpkecvlpggetagdmgklrqiiqrggiliterkkadfstkdiyqdlnrkgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfqgdttgsqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssaqfgyyfrvtckeekvlrnnknfstvdiqkngvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqdeiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvgstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleefq/ptvwyhetlewlkeekrrdehrrrpdhpdfdastlyvpedflnsctpgmrkwwqiksqnfdlvicykvgKFyelyhmdaligvselglvfmkgnwahsgfPeiafgrysdslvqkgykvarveqtetpemmearcrkmahiskydrvvrreicriitkgtqtysvlegdpsenyskyllslkekeedsshtraygvcfvdtslgkffigqfsddrhcsrfrtlvahyppvqvlfekgnlsketktilksslscslqeglipgsqfwdasktlrtlleeeyfreklsdgivmlpqvlkgmtsesdsigltpgekselalsalggcvfylkkclidqellsmanfeeyipldsdtvskayqrmvldavtlnnleiflngtngstegtllervdtchtpfgkrllkqwlcaplcnhyaindrldaiedlmvvpdkisevvellkklpdlerllskihnvgsplksqnhpdsraimyeettyskkkiidflsalegfkvmckiigimeevadgfkskilkqvislqtknpegrfpdltvelnrwdtafdhekarktglitpkagfsdydqaladireneqslleylekqrnrigcrtivywgigrnryqleipenfttrnlpeyelkstkkgckrywtktiekklanlinaeerrdvslkdcmrrlfynfdknykdwqsaveciavldvllclanysrggdgpmcrpvillpedtppflelkgsrhpcitddfipndiligceeeeqenkaycvlvtgpnmggkstlmrqagllavmaqmgcyvpaevcrltpidrvftrlgstffvelsetasilmhatahslvlvdelgrgtatfdgtaianavvkelaetikcrtlfsthyhslvedysqnvavrlghmacmtflykfikgacpksygfnaarlanlpeeviqkghrkarefekmnqslrlfre >2o8f_B:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MUTSALPHA (MSH2/MSH6) BOUND TO DNA WITH A SINGLE BASE T INSERT organism=HOMO SAPIENS DNA sequence DC(F15):DG(E17) DG(F16):DC(E16) DC(F17):DG(E15) DT(F18):DA(E14) DA(F19):DT(E13) DG(F20):DC(E12) DC(F21):DG(E11) DG(F22):DC(E10) DG(F24):DC(E9) DC(F25):DG(E8) DG(F26):DC(E7) DG(F27):DC(E6) DC(F28):DG(E5) DC(F29):DG(E4) DG(F30):DC(E3) DT(F31):DA(E2) DC(F32):DG(E1) chainB ( 70) LYS431 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 71) PHE432 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 (101) PRO462 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 prot.sequence ptvwyhetlewlkeekrrdehrrrpdhpdfdastlyvpedflnsctpgmrkwwqiksqnfdlvicykvgKFyelyhmdaligvselglvfmkgnwahsgfPeiafgrysdslvqkgykvarveqtetpemmearcrkmahiskydrvvrreicriitkgtqtysvlegdpsenyskyllslkekeedsshtraygvcfvdtslgkffigqfsddrhcsrfrtlvahyppvqvlfekgnlsketktilksslscslqeglipgsqfwdasktlrtlleeeyfreklsdgivmlpqvlkgmtsesdsigltpgekselalsalggcvfylkkclidqellsmanfeeyipldsdtvskayqrmvldavtlnnleiflngtngstegtllervdtchtpfgkrllkqwlcaplcnhyaindrldaiedlmvvpdkisevvellkklpdlerllskihnvgsplksqnhpdsraimyeettyskkkiidflsalegfkvmckiigimeevadgfkskilkqvislqtknpegrfpdltvelnrwdtafdhekarktglitpkagfsdydqaladireneqslleylekqrnrigcrtivywgigrnryqleipenfttrnlpeyelkstkkgckrywtktiekklanlinaeerrdvslkdcmrrlfynfdknykdwqsaveciavldvllclanysrggdgpmcrpvillpedtppflelkgsrhpcitddfipndiligceeeeqenkaycvlvtgpnmggkstlmrqagllavmaqmgcyvpaevcrltpidrvftrlgstffvelsetasilmhatahslvlvdelgrgtatfdgtaianavvkelaetikcrtlfsthyhslvedysqnvavrlghmacmtflykfikgacpksygfnaarlanlpeeviqkghrkarefekmnqslrlfre >2o8k_A:"Winged_helix"_DNA-binding_domain; title=NMR STRUCTURE OF THE SIGMA-54 RPON DOMAIN BOUND TO THE-24 PROMOTER ELEMENT organism=AQUIFEX AEOLICUS DNA sequence DG(C115):DC(B114) DA(C116):DT(B113) DA(C117):DT(B112) DA(C118):DT(B111) DC(C119):DG(B110) DG(C120):DC(B109) DT(C121):DA(B108) DG(C122):DC(B107) DC(C123):DG(B106) DC(C124):DG(B105) DA(C125):DT(B104) DA(C126):DT(B103) DA(C127):DT(B102) DA(C128):DT(B101) chainA ( 27) ASP40 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 43) ARG56 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 44) ARG57 0 0 0 0 0 0 6 17 15 0 0 0 0 0 ( 45) THR58 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 48) LYS61 0 0 0 0 0 0 5 3 0 0 0 0 0 0 prot.sequence hmltqgelmklikeivenedkrkpysDqeianilkekgfkvaRRTvaKyremlgipssrerri >2o93_LMO:p53-like_transcription_factors;E_set_domains;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF NFAT BOUND TO THE HIV-1 LTR TANDEM KAPPAB ENHANCER ELEMENT organism=Homo sapiens DNA sequence DG(B2):DC(A25) DG(B3):DC(A24) DA(B4):DT(A23) DA(B5):DT(A22) DA(B6):DT(A21) DG(B7):DC(A20) DT(B8):DA(A19) DC(B9):DG(A18) DC(B10):DG(A17) DC(B11):DG(A16) DC(B12):DG(A15) DA(B13):DT(A14) DG(B14):DC(A13) DC(B15):DG(A12) DG(B16):DC(A11) DG(B17):DC(A10) DA(B18):DT(A9) DA(B19):DT(A8) DA(B20):DT(A7) DG(B21):DC(A6) DT(B22):DA(A5) DC(B23):DG(A4) DC(B24):DG(A3) DC(B25):DG(A2) chainL ( 30) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 5 ( 33) TYR424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 ( 36) GLU427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 ( 39) ARG430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 (180) GLN571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 4 0 (183) ALA574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (274) ARG665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainM ( 27) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 4 0 0 0 0 0 0 0 ( 30) TYR424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 ( 33) GLU427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 ( 36) ARG430 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 3 0 0 0 0 0 0 0 0 ( 88) LYS482 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) ARG537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (177) GLN571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 1 0 0 0 0 0 0 chainO ( 30) ARG421 4 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) TYR424 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR426 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLU427 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG430 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) GLN571 0 4 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG572 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence assvplewplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigrkntrvrlvfrvhipessgrivslqtasnpiecsQrsAhelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkRkrsqpqhftyhpv/vplewplssqsgsyelrievqpkphhRahYetEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgKtvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigRkntrvrlvfrvhipessgrivslqtasnpiecsQrsahelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv/assvplewplssqsgsyelrievqpkphhRahYeTEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigrkntrvrlvfrvhipessgrivslqtasnpiecsQRsahelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv >2o93_O:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF NFAT BOUND TO THE HIV-1 LTR TANDEM KAPPAB ENHANCER ELEMENT organism=Homo sapiens DNA sequence DG(B2):DC(A25) DG(B3):DC(A24) DA(B4):DT(A23) DA(B5):DT(A22) DA(B6):DT(A21) DG(B7):DC(A20) DT(B8):DA(A19) DC(B9):DG(A18) DC(B10):DG(A17) DC(B11):DG(A16) DC(B12):DG(A15) DA(B13):DT(A14) DG(B14):DC(A13) DC(B15):DG(A12) DG(B16):DC(A11) DG(B17):DC(A10) DA(B18):DT(A9) DA(B19):DT(A8) DA(B20):DT(A7) DG(B21):DC(A6) DT(B22):DA(A5) DC(B23):DG(A4) DC(B24):DG(A3) DC(B25):DG(A2) chainO ( 30) ARG421 4 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) TYR424 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR426 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLU427 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG430 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) GLN571 0 4 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG572 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence assvplewplssqsgsyelrievqpkphhRahYeTEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigrkntrvrlvfrvhipessgrivslqtasnpiecsQRsahelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv >2o9l_A:"Winged_helix"_DNA-binding_domain; title=AMBER REFINED NMR STRUCTURE OF THE SIGMA-54 RPON DOMAIN BOUND TO THE- 24 PROMOTER ELEMENT organism=AQUIFEX AEOLICUS DNA sequence DG(C78):DC(B77) DA(C79):DT(B76) DA(C80):DT(B75) DA(C81):DT(B74) DC(C82):DG(B73) DG(C83):DC(B72) DT(C84):DA(B71) DG(C85):DC(B70) DC(C86):DG(B69) DC(C87):DG(B68) DA(C88):DT(B67) DA(C89):DT(B66) DA(C90):DT(B65) DA(C91):DT(B64) chainA ( 27) ASP27 0 0 0 0 0 0 0 0 0 0 9 0 0 0 ( 43) ARG43 0 0 0 0 0 0 0 0 0 12 24 0 0 0 ( 44) ARG44 0 0 0 0 0 0 4 11 7 0 0 0 0 0 ( 45) THR45 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 48) LYS48 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 5 7 prot.sequence hmltqgelmklikeivenedkrkpysDqeianilkekgfkvaRRTvaKyremlgipssRerri >2oaa_AB: title=RESTRICTION ENDONUCLEASE MVAI-COGNATE DNA SUBSTRATE COMPLEX organism=KOCURIA VARIANS DNA sequence DA(F-4):DT(E4) DT(F-3):DA(E3) DC(F-2):DG(E2) DC(F-1):DG(E1) DA(F0):DT(E0) DG(F1):DC(E-1) DG(F2):DC(E-2) DT(F3):DA(E-3) DA(F4):DT(E-4) DC(F5):DG(E-5) DC(D-5):DG(E-6) DA(D-4):DT(C4) DT(D-3):DA(C3) DC(D-2):DG(C2) DC(D-1):DG(C1) DA(D0):DT(C0) DG(D1):DC(C-1) DG(D2):DC(C-2) DT(D3):DA(C-3) DA(D4):DT(C-4) DC(D5):DG(C-5) chainA ( 29) ASN28 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 4 0 0 0 0 0 ( 30) THR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 ( 46) ASN45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 4 0 ( 66) SER65 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 ( 69) THR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 ( 72) THR71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 (101) HIS100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (103) THR102 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 (208) ASP207 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 (210) ARG209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 11 1 0 0 0 0 (214) TYR213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 1 0 (219) LYS218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 6 (224) HIS223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 2 0 0 (226) HIS225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 12 0 0 0 0 (231) ARG230 0 0 0 0 0 0 0 0 0 0 0 0 0 12 18 0 0 0 0 0 0 chainB ( 30) ASN28 0 0 1 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) THR29 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN45 0 0 0 0 0 0 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) SER65 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR68 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR71 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) HIS100 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) THR102 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ASP207 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) ARG209 0 0 0 13 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) TYR213 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) LYS218 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 (223) LYS221 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 (225) HIS223 0 0 0 0 0 10 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) HIS225 0 0 0 0 25 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ARG230 0 0 12 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smseylnllkeaiqnvvdggwhetkrkgNTgigktfedllekeedNldapdfhdieikthetaakSllTlfTksptnprgantmlrnrygkkdeygnnilHqTvsgnrktnsnsynydfkididwesqvvrlevfdkqdimidnsvywsfdslqnqldkklkyiavisaeskienekkyykynsanlftdltvqslcrgiengdikvDiRigaYhsgkKkgktHdHgtafRinmeklleygevkviv/ksmseylnllkeaiqnvvdggwhetkrkgNTgigktfedllekeedNldapdfhdieikthetaakSllTlfTksptnprgantmlrnrygkkdeygnnilHqTvsgnrktnsnsynydfkididwesqvvrlevfdkqdimidnsvywsfdslqnqldkklkyiavisaeskienekkyykynsanlftdltvqslcrgiengdikvDiRigaYhsgkKkgKtHdHgtafRinmeklleygevkviv >2oaa_B: title=RESTRICTION ENDONUCLEASE MVAI-COGNATE DNA SUBSTRATE COMPLEX organism=KOCURIA VARIANS DNA sequence DG(C-5):DC(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DT(C0):DA(D0) DG(C1):DC(D-1) DG(C2):DC(D-2) DA(C3):DT(D-3) DT(C4):DA(D-4) DG(E-6):DC(D-5) DG(E-5):DC(F5) DT(E-4):DA(F4) DA(E-3):DT(F3) DC(E-2):DG(F2) DC(E-1):DG(F1) DT(E0):DA(F0) DG(E1):DC(F-1) DG(E2):DC(F-2) DA(E3):DT(F-3) DT(E4):DA(F-4) chainB ( 30) ASN28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 1 0 0 ( 31) THR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 ( 47) ASN45 0 0 0 0 0 0 0 0 0 0 0 0 3 4 4 0 0 0 0 0 0 ( 67) SER65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 70) THR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 ( 73) THR71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 (102) HIS100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 (104) THR102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 (209) ASP207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 (211) ARG209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 13 0 0 0 (215) TYR213 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 (220) LYS218 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 (223) LYS221 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 (225) HIS223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 0 0 0 0 0 (227) HIS225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 25 0 0 0 0 (232) ARG230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 12 0 0 prot.sequence ksmseylnllkeaiqnvvdggwhetkrkgNTgigktfedllekeedNldapdfhdieikthetaakSllTlfTksptnprgantmlrnrygkkdeygnnilHqTvsgnrktnsnsynydfkididwesqvvrlevfdkqdimidnsvywsfdslqnqldkklkyiavisaeskienekkyykynsanlftdltvqslcrgiengdikvDiRigaYhsgkKkgKtHdHgtafRinmeklleygevkviv >2odi_A:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE BCNI-COGNATE DNA SUBSTRATE COMPLEX organism=BREVIBACILLUS CENTROSPORUS DNA sequence DA(C-4):DT(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DC(C0):DG(D0) DG(C1):DC(D-1) DG(C2):DC(D-2) DA(C3):DT(D-3) DG(C4):DC(D-4) DA(C5):DT(F6) DC(C6):DG(F5) DA(E-4):DT(F4) DA(E-3):DT(F3) DC(E-2):DG(F2) DC(E-1):DG(F1) DC(E0):DG(F0) DG(E1):DC(F-1) DG(E2):DC(F-2) DA(E3):DT(F-3) DG(E4):DC(F-4) chainA ( 30) ARG30 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASP32 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP33 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) SER71 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) THR74 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) HIS77 0 0 0 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) PHE111 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) THR113 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASP200 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) CYS202 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) HIS214 0 0 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) ARG216 0 0 0 17 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS219 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ARG221 0 0 0 0 0 14 11 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkiwskeevvnklheiknkgylsvptdmfRtDDgvvgqilerqfgvqennitlgdlgefelkgmrnrkakSNlTlfHkkpvagqtviqifnrfgyvkpssrnpevmkkklFtTikggrlnnlgltlnakhaseinlyyqdeylstwdlnlskieklvlvfaetigranspeeqfhftkaymlteinditslindgvlvmDlCidqdlskskgpHdRgpHlRipiskldklyrnierll >2odi_AB:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE BCNI-COGNATE DNA SUBSTRATE COMPLEX organism=BREVIBACILLUS CENTROSPORUS DNA sequence DC(F-4):DG(E4) DT(F-3):DA(E3) DC(F-2):DG(E2) DC(F-1):DG(E1) DG(F0):DC(E0) DG(F1):DC(E-1) DG(F2):DC(E-2) DT(F3):DA(E-3) DT(F4):DA(E-4) DG(F5):DC(C6) DT(F6):DA(C5) DC(D-4):DG(C4) DT(D-3):DA(C3) DC(D-2):DG(C2) DC(D-1):DG(C1) DG(D0):DC(C0) DG(D1):DC(C-1) DG(D2):DC(C-2) DT(D3):DA(C-3) DT(D4):DA(C-4) chainA ( 30) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 32) ASP32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 ( 33) ASP33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 ( 71) SER71 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 ( 74) THR74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 ( 77) HIS77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 0 0 0 (111) PHE111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 0 0 0 0 (113) THR113 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 (200) ASP200 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 (202) CYS202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (214) HIS214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 0 0 (216) ARG216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 17 0 0 0 (219) HIS219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 (221) ARG221 0 0 0 0 0 0 0 0 0 0 0 0 0 11 14 0 0 0 0 0 chainB ( 30) ARG30 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASP32 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP33 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN38 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) SER71 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) THR74 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) HIS77 0 0 0 0 7 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) PHE111 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) THR113 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASP200 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) CYS202 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) HIS214 0 0 0 0 0 4 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) ARG216 0 0 0 0 15 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS219 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ARG221 0 0 13 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkiwskeevvnklheiknkgylsvptdmfRtDDgvvgqilerqfgvqennitlgdlgefelkgmrnrkakSNlTlfHkkpvagqtviqifnrfgyvkpssrnpevmkkklFtTikggrlnnlgltlnakhaseinlyyqdeylstwdlnlskieklvlvfaetigranspeeqfhftkaymlteinditslindgvlvmDlCidqdlskskgpHdRgpHlRipiskldklyrnierll/mkiwskeevvnklheiknkgylsvptdmfRtDDgvvgQilerqfgvqennitlgdlgefelkgmrnrkakSNlTlfHkkpvagqtviqifnrfgyvkpssrnpevmkkklFtTikggrlnnlgltlnakhaseinlyyqdeylstwdlnlskieklvlvfaetigranspeeqfhftkaymlteinditslindgvlvmDlCidqdlskskgpHdRgpHlRipiskldklyrnierll >2oeh_A:ARID-like; title=DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE MRF2-DNA COMPLEX USING PARAMAGNETIC SPIN LABELING organism=HOMO SAPIENS DNA sequence DA(B2):DT(C29) DC(B3):DG(C28) DA(B4):DT(C27) DA(B5):DT(C26) DT(B6):DA(C25) DA(B7):DT(C24) DT(B8):DA(C23) DA(B9):DT(C22) DA(B10):DT(C21) DC(B11):DG(C20) DG(B12):DC(C19) DT(B13):DA(C18) DC(B14):DG(C17) DG(B15):DC(C16) chainA ( 58) LYS58 0 0 0 0 0 0 0 2 4 0 0 0 0 0 ( 71) THR71 0 0 0 0 0 0 4 6 5 0 0 0 0 0 ( 72) SER72 0 0 0 0 0 2 6 3 0 0 0 0 0 0 ( 75) THR75 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 76) CYS76 0 0 0 0 6 2 0 0 0 0 0 0 0 0 prot.sequence radeqaflvalykymkerktpieripylgfkqinlwtmfqaaqklggyetitarrqwKhiydelggnpgsTSaaTCtrrhyerlilpyerfikgeedkplppikprk >2ofi_A:DNA-glycosylase; title=CRYSTAL STRUCTURE OF 3-METHYLADENINE DNA GLYCOSYLASE I (TAG) BOUND TO DNA/3MA organism=Salmonella typhi DNA sequence DC(C1):DG(B12) DC(C2):DG(B11) DG(C3):DG(B10) DT(C4):DC(B9) DT(C5):DA(B8) DA(C6):DT(B6) DG(C7):DC(B5) DT(C8):DA(B4) DC(C9):DG(B3) DC(C10):DG(B2) DG(C11):DC(B1) chainA ( 42) ALA42 0 0 0 0 1 0 0 0 0 0 0 ( 44) LEU44 0 0 0 0 14 5 0 0 0 0 0 ( 86) ILE86 0 0 0 0 1 0 0 0 0 0 0 ( 88) HIS88 0 0 0 2 2 0 0 0 0 0 0 ( 91) LYS91 0 0 0 0 5 0 0 0 0 0 0 prot.sequence mqrcdwvsqdplyiayhdnewgvpetdsrklfemiclegqqAgLswitvlkkrenyracfhqfdpiriaamqeedverllqntgiIrHrgKiqaiisnarawlameqngesfadfvwsfvdgqpqitqaasldkiptstpasdalakalkkrgfkfvgtticysfmqacglvndhitgcfchpg >2og0_AB:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE LAMBDA XIS-DNA COMPLEX organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DG(C1):DC(D36) DT(C2):DA(D35) DA(C3):DT(D34) DT(C4):DA(D33) DT(C5):DA(D32) DA(C6):DT(D31) DT(C7):DA(D30) DG(C8):DC(D29) DT(C9):DA(D28) DA(C10):DT(D27) DG(C11):DC(D26) DT(C12):DA(D25) DC(C13):DG(D24) DT(C14):DA(D23) DG(C15):DC(D22) DT(C16):DA(D21) DT(C17):DA(D20) DT(C18):DA(D19) chainA ( 19) GLU19 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG23 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 19) GLU19 0 0 0 0 0 0 0 0 2 1 5 1 0 0 0 0 0 0 ( 23) ARG23 0 0 0 0 0 0 5 12 8 1 0 0 0 0 0 0 0 0 ( 26) ARG26 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 ( 39) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 3 0 prot.sequence myltlqewnarqrrprslEtvrRwvresrifpppvkdgreylfhesavkvd/myltlqewnarqrrprslEtvrRwvResrifpppvkdgReylfhesavkvdl >2og0_B:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE LAMBDA XIS-DNA COMPLEX organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DG(C1):DC(D36) DT(C2):DA(D35) DA(C3):DT(D34) DT(C4):DA(D33) DT(C5):DA(D32) DA(C6):DT(D31) DT(C7):DA(D30) DG(C8):DC(D29) DT(C9):DA(D28) DA(C10):DT(D27) DG(C11):DC(D26) DT(C12):DA(D25) DC(C13):DG(D24) DT(C14):DA(D23) DG(C15):DC(D22) DT(C16):DA(D21) DT(C17):DA(D20) DT(C18):DA(D19) chainB ( 19) GLU19 0 0 0 0 0 0 0 0 2 1 5 1 0 0 0 0 0 0 ( 23) ARG23 0 0 0 0 0 0 5 12 8 1 0 0 0 0 0 0 0 0 ( 26) ARG26 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 ( 39) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 3 0 prot.sequence myltlqewnarqrrprslEtvrRwvResrifpppvkdgReylfhesavkvdl >2oh2_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF HUMAN DNA POLYMERASE organism=Homo sapiens DNA sequence DA(T5):TTP(B874) DG(T6):DC(P13) DG(T7):DC(P12) DG(T8):DC(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) chainB ( 87) ASP107 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ASP109 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ALA110 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) PHE111 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) TYR112 1 0 0 0 0 0 0 0 0 0 0 0 0 (115) MET135 18 0 0 0 0 0 0 0 0 0 0 0 0 (117) SER137 5 0 0 0 0 0 0 0 0 0 0 0 0 (118) THR138 5 0 0 0 0 0 0 0 0 0 0 0 0 (121) TYR141 6 0 0 0 0 0 0 0 0 0 0 0 0 (124) ARG144 9 0 0 0 0 0 0 0 0 0 0 0 0 (131) ALA151 2 0 0 0 0 0 0 0 0 0 0 0 0 (178) ASP198 5 0 0 0 0 0 0 0 0 0 0 0 0 (179) GLU199 2 0 0 0 0 0 0 0 0 0 0 0 0 (248) ASP325 1 0 0 0 0 0 0 0 0 0 0 0 0 (251) LYS328 11 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU419 0 1 0 0 0 0 0 0 0 0 0 0 0 (392) THR469 0 0 0 0 0 0 1 0 0 0 0 0 0 (435) ARG512 0 0 0 2 3 0 0 0 0 0 0 0 0 prot.sequence lndnkagmegldkekinkiimeatkgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsMlStsnyharrfgvraAmpgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfiknsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthltrdgerksmsvErtfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiklknvnfevkTrastvssvvstaeeifaiakellkteidadfphplrlrlmgvRissfp >2opf_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI (R252A) IN COMPLEX WITH AP-SITE CONTAINING DNA SUBSTRATE organism=Escherichia coli DNA sequence DG(B402):DC(C432) DC(B403):DG(C431) DT(B404):DA(C430) DT(B405):DA(C429) DC(B406):DG(C428) DT(B408):DA(C426) DC(B409):DG(C425) DC(B410):DG(C424) DT(B411):DA(C423) DG(B412):DC(C422) chainA ( 69) GLN69 0 0 0 2 11 0 0 0 0 0 ( 70) LEU70 0 0 0 0 18 10 0 0 0 0 ( 71) TYR71 0 0 0 0 0 11 0 0 0 0 (245) SER251 0 0 1 0 0 0 0 0 0 0 prot.sequence pegpeirraadnleaaikgkpltdvwfafpqlktyqsqligqhvthvetrgkallthfsndltlyshnQLYgvwrvvdtgeepqttrvlrvklqtadktillysasdiemlrpeqltthpflqrvgpdvldpnltpevvkerllsprfrnrqfagllldqaflaglgnylrveilwqvgltgnhkakdlnaaqldalahalleiprfsyatrgqvdalfrfkvfhrdgepcercgsiiekttlsSapfywcpgcqh >2oq4_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI (E2Q) IN COMPLEX WITH AP-SITE CONTAINING DNA SUBSTRATE organism=Escherichia coli DNA sequence DC(D422):DG(C412) DG(D424):DC(C410) DG(D425):DC(C409) DA(D426):DT(C408) DG(D428):DC(C406) DA(D429):DT(C405) DA(D430):DT(C404) DG(D431):DC(C403) DC(D432):DG(C402) chainA ( 69) GLN69 0 0 0 0 1 0 0 0 0 ( 70) LEU70 0 0 0 2 14 0 0 0 0 ( 71) TYR71 0 0 0 12 0 0 0 0 0 (242) ARG252 0 0 0 0 14 7 0 0 0 prot.sequence pqgpeirraadnleaaikgkpltdvwfafpqlktyqsqligqhvthvetrgkallthfsndltlyshnQLYgvwrvvdtgeepqttrvlrvklqtadktillysasdiemlrpeqltthpflqrvgpdvldpnltpevvkerllsprfrnrqfagllldqaflaglgnylrveilwqvgltgnhkakdlnaaqldalahalleiprfsyatrglfrfkvfhrdgepcercgsiiekttlssRpfywcpgcqh >2or1_LR:lambda_repressor-like_DNA-binding_domains; title=RECOGNITION OF A DNA OPERATOR BY THE REPRESSOR OF PHAGE 434. A VIEW AT HIGH RESOLUTION organism=PHAGE 434 DNA sequence DA(A2):DT(B20) DG(A3):DC(B19) DT(A4):DA(B18) DA(A5):DT(B17) DC(A6):DG(B16) DA(A7):DT(B15) DA(A8):DT(B14) DA(A9):DT(B13) DC(A10):DG(B12) DT(A11):DA(B11) DT(A12):DA(B10) DT(A13):DA(B9) DC(A14):DG(B8) DT(A15):DA(B7) DT(A16):DA(B6) DG(A17):DC(B5) DT(A18):DA(B4) DA(A19):DT(B3) DT(A20):DA(B2) chainL ( 17) GLN17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 27) THR27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 28) GLN28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 ( 29) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 13 4 0 0 ( 30) SER30 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 32) GLU32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 ( 33) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 3 6 2 0 0 0 0 ( 38) LYS38 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 39) THR39 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainR ( 27) THR27 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLN28 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 3 12 21 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER30 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) GLU32 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) GLN33 0 0 0 0 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS38 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR39 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sissrvkskriqlglnQaelaqkvgtTQQSiEQlengKTkrpRflpelasalgvsvdwllngt/sissrvkskriqlglnqaelaqkvgtTQQSiEQlengKTkrprflpelasalgvsvdwllngt >2or1_R:lambda_repressor-like_DNA-binding_domains; title=RECOGNITION OF A DNA OPERATOR BY THE REPRESSOR OF PHAGE 434. A VIEW AT HIGH RESOLUTION organism=? DNA sequence DA(A2):DT(B20) DG(A3):DC(B19) DT(A4):DA(B18) DA(A5):DT(B17) DC(A6):DG(B16) DA(A7):DT(B15) DA(A8):DT(B14) DA(A9):DT(B13) DC(A10):DG(B12) DT(A11):DA(B11) DT(A12):DA(B10) DT(A13):DA(B9) DC(A14):DG(B8) DT(A15):DA(B7) DT(A16):DA(B6) DG(A17):DC(B5) DT(A18):DA(B4) DA(A19):DT(B3) DT(A20):DA(B2) chainR ( 27) THR27 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLN28 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 3 12 21 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER30 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) GLU32 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) GLN33 0 0 0 0 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS38 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR39 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sissrvkskriqlglnqaelaqkvgtTQQSiEQlengKTkrprflpelasalgvsvdwllngt >2ost_A: title=THE STRUCTURE OF A BACTERIAL HOMING ENDONUCLEASE : I-SSP6803I organism=Synechocystis sp. DNA sequence DG(Y3):DC(Z58) DG(Y4):DC(Z57) DC(Y5):DG(Z56) DC(Y6):DG(Z55) DT(Y7):DA(Z54) DT(Y8):DA(Z53) DC(Y9):DG(Z52) DG(Y10):DC(Z51) DG(Y11):DC(Z50) DG(Y12):DC(Z49) DC(Y13):DG(Z48) DT(Y14):DA(Z47) DC(Y15):DG(Z46) DA(Y16):DT(Z45) DT(Y17):DA(Z44) DA(Y18):DT(Z43) DA(Y19):DT(Z42) DC(Y20):DG(Z41) DC(Y21):DG(Z40) DC(Y22):DG(Z39) DG(Y23):DC(Z38) DA(Y24):DT(Z37) DA(Y25):DT(Z36) DG(Y26):DC(Z35) DG(Y27):DC(Z34) DG(Y28):DC(Z33) DA(Y29):DT(Z32) chainA ( 4) THR3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 0 ( 5) LYS4 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) TRP54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 ( 60) THR59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 66) ASP65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 68) ARG67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 10 0 0 0 0 0 0 0 ( 70) THR69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 ( 71) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 2 0 0 0 0 0 0 0 0 0 0 ( 73) ASN72 0 0 0 0 0 0 0 0 0 0 0 3 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ILE76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 79) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 4 0 0 0 0 0 0 0 0 (113) SER112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 (114) GLU113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 6 0 0 0 0 0 0 (116) HIS115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (124) GLN123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 (125) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 11 0 0 prot.sequence mgsTKlkgdiaqqaaimralkmgwgvlkplgdrlsydlvfdvegillkvqvkssWksekTgnyvvDnRrTRTNRrnIvRspyrgndfdfavayveelelfyvfpvdvfisygSEiHlvetdkrQRkprsfgyreawhlilqkgaaqke >2ost_AB: title=THE STRUCTURE OF A BACTERIAL HOMING ENDONUCLEASE : I-SSP6803I organism=Synechocystis sp. DNA sequence DG(Y3):DC(Z58) DG(Y4):DC(Z57) DC(Y5):DG(Z56) DC(Y6):DG(Z55) DT(Y7):DA(Z54) DT(Y8):DA(Z53) DC(Y9):DG(Z52) DG(Y10):DC(Z51) DG(Y11):DC(Z50) DG(Y12):DC(Z49) DC(Y13):DG(Z48) DT(Y14):DA(Z47) DC(Y15):DG(Z46) DA(Y16):DT(Z45) DT(Y17):DA(Z44) DA(Y18):DT(Z43) DA(Y19):DT(Z42) DC(Y20):DG(Z41) DC(Y21):DG(Z40) DC(Y22):DG(Z39) DG(Y23):DC(Z38) DA(Y24):DT(Z37) DA(Y25):DT(Z36) DG(Y26):DC(Z35) DG(Y27):DC(Z34) DG(Y28):DC(Z33) DA(Y29):DT(Z32) chainA ( 4) THR3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 0 ( 5) LYS4 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) TRP54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 ( 60) THR59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 66) ASP65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 68) ARG67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 10 0 0 0 0 0 0 0 ( 70) THR69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 ( 71) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 2 0 0 0 0 0 0 0 0 0 0 ( 73) ASN72 0 0 0 0 0 0 0 0 0 0 0 3 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ILE76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 79) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 4 0 0 0 0 0 0 0 0 (113) SER112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 (114) GLU113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 6 0 0 0 0 0 0 (116) HIS115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (124) GLN123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 (125) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 11 0 0 chainB ( 3) THR3 0 0 0 0 0 0 0 0 0 0 1 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) LYS4 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) TRP54 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) THR59 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ASP65 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG67 0 0 0 0 0 0 0 6 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR69 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) THR71 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 76) ILE76 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) SER112 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) GLU113 0 0 0 0 0 0 8 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) HIS115 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) GLN123 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mgsTKlkgdiaqqaaimralkmgwgvlkplgdrlsydlvfdvegillkvqvkssWksekTgnyvvDnRrTRTNRrnIvRspyrgndfdfavayveelelfyvfpvdvfisygSEiHlvetdkrQRkprsfgyreawhlilqkgaaqke/gsTKlkgdiaqqaaimralkmgwgvlkplgdrlsydlvfdvegillkvqvkssWksekTgnyvvDnRrTRTNrrnIvRspyrgndfdfavayveelelfyvfpvdvfisygSEiHlvetdkrQrkprsfgyreawhlilqkgaaqket >2owo_A:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;RuvA_domain_2-like;Nucleic_acid-binding_proteins; title=LAST STOP ON THE ROAD TO REPAIR: STRUCTURE OF E.COLI DNA LIGASE BOUND TO NICKED DNA-ADENYLATE organism=Escherichia coli DNA sequence DC(B1):DG(D52) DA(B2):DT(D51) DT(B3):DA(D50) DT(B4):DA(D49) DC(B5):DG(D48) DC(B6):DG(D47) DG(B7):DC(D46) DA(B8):DT(D45) DT(B9):DA(D44) DA(B10):DT(D43) DG(B11):DC(D42) DT(B12):DA(D41) DG(B13):DC(D40) DG(B14):DC(C39) DG(B15):OMC(C38) DG(B16):DC(C37) DT(B17):DA(C36) DC(B18):DG(C35) DG(B19):DC(C34) DC(B20):DG(C33) DA(B21):DT(C32) DA(B22):DT(C31) DT(B23):DA(C30) DT(B24):DA(C29) DG(B25):DC(C28) DT(B26):DA(C27) chainA (119) LEU119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (200) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (201) ASN201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (204) ALA204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (208) ARG208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 2 0 0 0 0 0 0 0 0 (359) HIS359 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) VAL383 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (384) ILE384 0 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 0 0 0 0 0 0 0 0 0 0 (487) ARG487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 10 0 0 0 0 prot.sequence mesieqqltelrttlrhheylyhvmdapeipdaeydrlmrelreletkhpelitpdsptqrvgaaplaafsqirhevpmlsldnvfdeesflafnkrvqdrlknnekvtwccelkldglavsilyengvlvsaatrgdgttgeditsnvrtiraiplklhgeniparlevrgevflpqagfekinedarrtggkvfanpRNaaagslRqldpritakrpltffcygvgvleggelpdthlgrllqfkkwglpvsdrvtlcesaeevlafyhkveedrptlgfdidgvvikvnslaqqeqlgfvaraprwavafkfpaqeqmtfvrdvefqvgrtgaitpvarlepvhvagvlvsnatlHnadeierlglrigdkvvirRagdVIpqvvnvvlserpedtrevvfpthcpvcgsdvervegeavarctgglicgaqrkeslkhfvsrramdvdgmgdkiidqlvekeyvhtpadlfkltagkltgleRmgpksaqnvvnalekakettfarflyalgirevgeataaglaayfgtlealeaasieelqkvpdvgivvashvhnffaeesnrnvisellaegvhwpap >2oxm_A:Uracil-DNA_glycosylase-like; title=CRYSTAL STRUCTURE OF A UNG2/MODIFIED DNA COMPLEX THAT REPRESENT A STABILIZED SHORT-LIVED EXTRAHELICAL STATE IN EZYMATIC DNA BASE FLIPPING organism=Homo sapiens DNA sequence DA(C22):DT(B10) DA(C23):DT(B9) DG(C24):DC(B8) DA(C25):DT(B7) DT(C26):DA(B6) 4MF(C27):DT(B5) DA(C28):DT(B4) DC(C29):DG(B3) chainA ( 67) HIS148 0 0 0 0 0 8 0 0 (133) ALA214 0 0 0 0 0 2 0 0 (190) PRO271 0 0 0 0 0 0 3 1 (191) LEU272 0 0 0 0 42 1 5 0 (194) TYR275 0 0 0 0 0 3 0 0 prot.sequence meffgeswkkhlsgefgkpyfiklmgfvaeerkhytvyppphqvftwtqmcdikdvkvvilgqdpyHgpnqahglcfsvqrpvppppsleniykelstdiedfvhpghgdlsgwakqgvlllnavltvrahqAnshkergweqftdavvswlnqnsnglvfllwgsyaqkkgsaidrkrhhvlqtahpsPLsvYrgffgcrhfsktnellqksgkkpidwkel >2oxv_A:Restriction_endonuclease-like; title=STRUCTURE OF THE A138T PROMISCUOUS MUTANT OF THE ECORI RESTRICTION ENDONUCLEASE BOUND TO ITS COGNATE RECOGNITION SITE. organism=Escherichia coli DNA sequence DT(C1) DC(C2) DG(C3) DC(C4) DG(C5) DA(C6) DA(C7) DT(C8) DT(C9) DC(C10) DG(C11) DC(C12) DG(C13) chainA ( 99) GLN115 0 0 0 0 0 0 0 4 0 0 0 0 0 (121) MET137 0 0 0 0 0 0 0 0 2 2 0 0 0 (122) THR138 0 0 0 0 0 0 0 0 0 3 1 0 0 (125) ASN141 0 0 0 0 0 0 0 3 0 0 0 0 0 (126) ALA142 0 0 0 0 0 0 6 5 0 0 0 0 0 (129) ARG145 0 0 0 0 0 6 12 0 0 0 0 0 0 prot.sequence sqgvigifgdyakahdlavgevsklvkkalsneypqlsfryrdsikkteinealkkidpdlggtlfvsnssikpdggivevkddygewrvvlvaeakhQgkdiinirngllvgkrgdqdlMTagNAieRshkniseianfmlseshfpyvlflegsnfltenisitrpdgrvvnleynsgilnrldrltaanygmpinsnlcinkfvnhkdksimlqaasiytqgdgrewdskimfeimfdisttslrvlgrdlfeqltsk >2oyq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF RB69 GP43 IN COMPLEX WITH DNA WITH 5-NIMP OPPOSITE AN ABASIC SITE ANALOG organism=Enterobacteria phage RB69 DNA sequence DC(E7):DG(F114) DT(E8):DA(F113) DT(E9):DA(F112) DA(E10):DT(F111) DT(E11):DA(F110) DG(E12):DC(F109) DA(E13):DT(F108) DC(E14):DG(F107) DA(E15):DT(F106) DG(E16):DC(F105) DC(E17):DG(F104) DC(E18):DG(F103) DG(E19):DC(F102) DC(E20):DG(F101) chainA (651) LYS706 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (679) LYS734 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlartevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >2oyt_A:Uracil-DNA_glycosylase-like; title=CRYSTAL STRUCTURE OF UNG2/DNA(TM) organism=Homo sapiens DNA sequence DA(C22):DT(B10) DA(C23):DT(B9) DG(C24):DC(B8) DA(C25):DT(B7) DT(C26):DA(B6) 4MF(C27):AAB(B5) DA(C28):DT(B4) DC(C29):DG(B3) DA(C30):DT(B2) chainA (190) PRO271 0 0 0 0 0 0 6 0 0 (191) LEU272 0 0 0 0 20 5 17 0 0 (194) TYR275 0 0 0 0 0 3 0 0 0 (195) ARG276 0 0 0 1 0 0 0 0 0 prot.sequence meffgeswkkhlsgefgkpyfiklmgfvaeerkhytvyppphqvftwtqmcdikdvkvvilgqdpyhgpnqahglcfsvqrpvppppsleniykelstdiedfvhpghgdlsgwakqgvlllnavltvrahqanshKergweqftdavvswlnqnsnglvfllwgsyaqkkgsaidrkrhhvlqtahpsPLsvyRgffgcrhfsktnellqksgkkpidwkel >2ozm_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF RB69 GP43 IN COMPLEX WITH DNA WITH 5-NITP OPPOSITE AN ABASIC SITE ANALOG organism=Enterobacteria phage RB69 DNA sequence DG(P1):DC(T17) DC(P2):DG(T16) DG(P3):DC(T15) DG(P4):DC(T14) DC(P5):DG(T13) DT(P6):DA(T12) DG(P7):DC(T11) DT(P8):DA(T10) DC(P9):DG(T9) DA(P10):DT(T8) DT(P11):DA(T7) DA(P12):DT(T6) DA(P13):DT(T5) DDG(P14):DC(T4) chainA (567) TYR567 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (706) LYS706 0 0 0 0 0 0 0 0 0 0 0 2 7 0 (734) LYS734 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >2ozs_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF RB69 GP43 IN COMPLEX WITH DNA WITH DATP OPPOSITE DTMP organism=Enterobacteria phage RB69 DNA sequence DT(T5):DA(P113) DT(T6):DA(P112) DA(T7):DT(P111) DT(T8):DA(P110) DG(T9):DC(P109) DA(T10):DT(P108) DC(T11):DG(P107) DA(T12):DT(P106) DG(T13):DC(P105) DC(T14):DG(P104) DC(T15):DG(P103) DG(T16):DC(P102) DC(T17):DG(P101) chainA (706) LYS706 8 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >2p0j_A:Restriction_endonuclease-like; title=STRUCTURE OF RESTRICTION ENDONUCLEASE BSTYI BOUND TO NON-COGNATE DNA organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(D1):DA(C11) DA(D2):DT(C10) DT(D3):DA(C9) DG(D4):DC(C8) DG(D5):DC(C7) DA(D6):DT(C6) DT(D7):DA(C5) DT(D8):DA(C4) DC(D9):DG(C3) DA(D10):DT(C2) DT(D11):DA(C1) chainA ( 46) GLU46 0 0 0 3 7 0 0 0 0 0 0 (133) LYS133 0 0 0 7 11 6 0 0 0 0 0 (134) TYR134 0 0 4 4 0 0 0 0 0 0 0 (172) SER172 0 0 1 4 1 0 0 0 0 0 0 prot.sequence mrivevyshlngleyiqvhlphiweeiqeiivsidaeacrtkeskEktkqgqilyspvalneafkekleakgwkesrtnyyvtadpkliretlslepeeqkkvieaagkealksynqtdfvkdrvaievqfgKYsfvaydlfvkhmafyvsdkidvgveilpmkelskemsSgisyyegelynvirqgrgvpavplvligiap >2p0j_AB:Restriction_endonuclease-like; title=STRUCTURE OF RESTRICTION ENDONUCLEASE BSTYI BOUND TO NON-COGNATE DNA organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(D1):DA(C11) DA(D2):DT(C10) DT(D3):DA(C9) DG(D4):DC(C8) DG(D5):DC(C7) DA(D6):DT(C6) DT(D7):DA(C5) DT(D8):DA(C4) DC(D9):DG(C3) DA(D10):DT(C2) DT(D11):DA(C1) chainA ( 46) GLU46 0 0 0 3 7 0 0 0 0 0 0 (133) LYS133 0 0 0 7 11 6 0 0 0 0 0 (134) TYR134 0 0 4 4 0 0 0 0 0 0 0 (172) SER172 0 0 1 4 1 0 0 0 0 0 0 chainB ( 70) ARG77 6 0 0 0 0 0 0 0 0 0 0 (108) TYR115 0 7 6 0 0 0 0 0 0 0 0 prot.sequence mrivevyshlngleyiqvhlphiweeiqeiivsidaeacrtkeskEktkqgqilyspvalneafkekleakgwkesrtnyyvtadpkliretlslepeeqkkvieaagkealksynqtdfvkdrvaievqfgKYsfvaydlfvkhmafyvsdkidvgveilpmkelskemsSgisyyegelynvirqgrgvpavplvligiap/mrivevyshlngleyiqvhlphiweeiqeiivsidaeacrtkeskelyspvalneafkekleakgwkesRtnyyvtadpkliretlslepeeqkkvieaagkealksYnqtdfvkdrvaievqfgkysfvaydlfvkhmafyvsdkidvgveilpmkelskemssgisyyegelynvirqgrgvpavplvligiap >2p5l_D:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A DIMER OF N-TERMINAL DOMAINS OF AHRC IN COMPLEX WITH AN 18BP DNA OPERATOR SITE organism=Bacillus subtilis DNA sequence DC(E1):DG(F18) DA(E2):DT(F17) DT(E3):DA(F16) DG(E4):DC(F15) DA(E5):DT(F14) DA(E6):DT(F13) DT(E7):DA(F12) DA(E8):DT(F11) DA(E9):DT(F10) DA(E10):DT(F9) DA(E11):DT(F8) DA(E12):DT(F7) DT(E13):DA(F6) DT(E14):DA(F5) DC(E15):DG(F4) DA(E16):DT(F3) DA(E17):DT(F2) DC(B1):DG(A18) DT(B2):DA(A17) DT(B3):DA(A16) DG(B4):DC(A15) DA(B5):DT(A14) DA(B6):DT(A13) DT(B7):DA(A12) DT(B8):DA(A11) DT(B9):DA(A10) DT(B10):DA(A9) DT(B11):DA(A8) DA(B12):DT(A7) DT(B13):DA(A6) DT(B14):DA(A5) DC(B15):DG(A4) DA(B16):DT(A3) DT(B17):DA(A2) DG(B18):DC(A1) chainD ( 1) MET1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 0 0 0 0 ( 39) ALA39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 13 7 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence MnkgqrhikireiitsneietqdelvdmlkqdgykvTQAtvSRdikelhlvkvptnngsykysl >2p5l_DH:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A DIMER OF N-TERMINAL DOMAINS OF AHRC IN COMPLEX WITH AN 18BP DNA OPERATOR SITE organism=Bacillus subtilis DNA sequence DC(E1):DG(F18) DA(E2):DT(F17) DT(E3):DA(F16) DG(E4):DC(F15) DA(E5):DT(F14) DA(E6):DT(F13) DT(E7):DA(F12) DA(E8):DT(F11) DA(E9):DT(F10) DA(E10):DT(F9) DA(E11):DT(F8) DA(E12):DT(F7) DT(E13):DA(F6) DT(E14):DA(F5) DC(E15):DG(F4) DA(E16):DT(F3) DA(E17):DT(F2) DC(B1):DG(A18) DT(B2):DA(A17) DT(B3):DA(A16) DG(B4):DC(A15) DA(B5):DT(A14) DA(B6):DT(A13) DT(B7):DA(A12) DT(B8):DA(A11) DT(B9):DA(A10) DT(B10):DA(A9) DT(B11):DA(A8) DA(B12):DT(A7) DT(B13):DA(A6) DT(B14):DA(A5) DC(B15):DG(A4) DA(B16):DT(A3) DT(B17):DA(A2) DG(B18):DC(A1) chainD ( 1) MET1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 0 0 0 0 ( 39) ALA39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 13 7 2 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 1) MET1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLN22 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN38 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ALA39 0 0 0 0 0 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER42 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence MnkgqrhikireiitsneietqdelvdmlkqdgykvTQAtvSRdikelhlvkvptnngsykysl/MnkgqrhikireiitsneietQdelvdmlkqdgykvTQAtvSRdikelhlvkvptnngsykysl >2p5o_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF RB69 GP43 IN COMPLEX WITH DNA CONTAINING AN ABASIC SITE ANALOG organism=Enterobacteria phage RB69 DNA sequence DC(I4):DG(J114) DT(I5):DA(J113) DT(I6):DA(J112) DA(I7):DT(J111) DT(I8):DA(J110) DG(I9):DC(J109) DA(I10):DT(J108) DC(I11):DG(J107) DA(I12):DT(J106) DG(I13):DC(J105) DC(I14):DG(J104) DC(I15):DG(J103) DG(I16):DC(J102) DC(I17):DG(J101) chainC (661) LYS706 0 2 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrnmlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslf >2p66_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA COMPLEXED WITH TETRAHYDROFURAN (ABASIC SITE) CONTAINING DNA organism=Homo sapiens DNA sequence DG(B7):DC(C10) DC(B8):DG(C9) DG(B9):DC(C8) DC(B10):DG(C7) DA(B11):DT(C6) DT(B12):DA(C5) DC(B13):DG(C4) DA(B14):DT(C3) DG(B15):DC(C2) DC(B16):DG(C1) chainA prot.sequence pqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >2p6r_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF SUPERFAMILY 2 HELICASE HEL308 IN COMPLEX WITH UNWOUND DNA organism=Archaeoglobus fulgidus DNA sequence DA(X1):DT(Y25) DT(X2):DA(Y24) DC(X3):DG(Y23) DG(X4):DC(Y22) DA(X5):DT(Y21) DT(X6):DA(Y20) DA(X7):DT(Y19) DG(X8):DC(Y18) DT(X9):DA(Y17) DC(X10):DG(Y16) DT(X11):DA(Y15) DC(X12):DG(Y14) DT(X13):DA(Y13) chainA (250) ARG253 0 0 0 0 0 0 0 0 0 0 6 1 0 (348) PHE351 0 0 0 0 0 0 0 0 0 0 0 0 46 (352) SER355 0 0 0 0 0 0 0 0 0 0 0 0 13 prot.sequence mkveelaesissyavgilkeeelfppqaeavekvfsgknlllamptaagktllaemamvreaikggkslyvvplralagekyesfkkwekiglrigistgdyesrdehlgdcdiivttsekadslirnraswikavsclvvdeihlldsekrgatleilvtkmrrmnkalrviglsatapnvteiaewldadyyvsdwrpvplvegvlcegtlelfdgafstsrrvkfeelveecvaenggvlvfestrRgaektavklsaitakyveneglekaileenegemsrklaecvrkgaafhhagllngqrrvvedafrrgnikvvvatptlaagvnlparrvivrslyrFdgySkrikvseykqmagragrpgmdergeaiiivgkrdreiavkryifgeperitsklgvethlrfhslsiicdgyaktleeledffadtfffkqneislsyelervvrqlenwgmvveaahlaptklgslvsrlyidpltgfifhdvlsrmelsdigalhlicrtpdmerltvrktdswveeeafrlrkelsyypsdfsveydwflsevktalclkdwieekdedeicakygiapgdlrrivetaewlsnamnriaeevgntsvsglterikhgvkeellelvrirhigrvrarklynagirnaedivrhrekvasligrgiaervvegisvks >2p7c_B:"Winged_helix"_DNA-binding_domain; title=SOLUTION STRUCTURE OF THE BACILLUS LICHENIFORMIS BLAI MONOMERIC FORM IN COMPLEX WITH THE BLAP HALF-OPERATOR. organism=BACILLUS LICHENIFORMIS DNA sequence DA(C13):DT(A12) DT(C14):DA(A11) DG(C15):DC(A10) DT(C16):DA(A9) DA(C17):DT(A8) DA(C18):DT(A7) DT(C19):DA(A6) DA(C20):DT(A5) DC(C21):DG(A4) DT(C22):DA(A3) DT(C23):DA(A2) DT(C24):DA(A1) chainB ( 26) THR26 0 0 0 0 0 3 7 0 0 0 0 0 ( 42) LYS42 0 0 0 1 5 0 0 0 0 0 0 0 ( 43) THR43 0 0 0 1 0 0 0 0 0 0 0 0 ( 45) GLN45 0 0 0 1 9 14 0 0 0 0 0 0 ( 46) THR46 0 12 14 8 0 0 0 0 0 0 0 0 ( 49) LEU49 0 0 1 8 15 0 0 0 0 0 0 0 ( 50) ARG50 2 20 8 0 0 0 0 0 0 0 0 0 ( 54) LYS54 7 0 0 0 0 0 0 0 0 0 0 0 ( 66) PHE66 0 0 0 0 0 2 0 0 0 0 0 0 ( 68) TYR68 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence mkkipqisdaelevmkviwkhssinTnevikelsktstwspKTiQTmlLRlikKgalnhhkegrvFvYtpnidesdyievks >2pe5_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE LAC REPRESSOR BOUND TO ONPG IN REPRESSED STATE organism=Escherichia coli DNA sequence DA(E2):DT(D21) DA(E3):DT(D20) DT(E4):DA(D19) DT(E5):DA(D18) DG(E6):DC(D17) DT(E7):DA(D16) DG(E8):DC(D15) DA(E9):DT(D14) DG(E10):DC(D13) DC(E11):DG(D12) DG(E12):DC(D11) DC(E13):DG(D10) DT(E14):DA(D9) DC(E15):DG(D8) DA(E16):DT(D7) DC(E17):DG(D6) chainA ( 5) LEU6 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 6) TYR7 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 ( 15) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 ( 16) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 4 11 7 0 ( 17) GLN18 0 0 0 0 0 0 0 0 0 0 0 0 3 11 7 6 ( 20) SER21 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 21) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 52) ALA53 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 prot.sequence kpvtLYdvaeyagvSYQtvSRvvnqashvsaktrekveaamaelnyipnrvAqqLAgkqllligvatsslalhapsqivaaiksradqlgasvvvsmversgveackaavhnllaqrvsgliinyplddqdaiaveaactnvpalfldvsdqtpinsiifshedgtrlgvehlvalghqqiallagplssvsarlrlagwhkyltrnqiqpiaeregdwsamsgfqqtmqmlnegivptamlvandqmalgamraitesglrvgadisvvgyddtedsscyipplttikqdfrllgqtsvdrllqlsqgqavkgnqllpvslvkrktt >2pe5_AB:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE LAC REPRESSOR BOUND TO ONPG IN REPRESSED STATE organism=Escherichia coli DNA sequence DA(E2):DT(D21) DA(E3):DT(D20) DT(E4):DA(D19) DT(E5):DA(D18) DG(E6):DC(D17) DT(E7):DA(D16) DG(E8):DC(D15) DA(E9):DT(D14) DG(E10):DC(D13) DC(E11):DG(D12) DG(E12):DC(D11) DC(E13):DG(D10) DT(E14):DA(D9) DC(E15):DG(D8) DA(E16):DT(D7) DC(E17):DG(D6) chainA ( 5) LEU6 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 6) TYR7 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 ( 15) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 ( 16) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 4 11 7 0 ( 17) GLN18 0 0 0 0 0 0 0 0 0 0 0 0 3 11 7 6 ( 20) SER21 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 21) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 52) ALA53 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 chainB ( 5) LEU6 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 15) SER16 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 ( 16) TYR17 0 0 0 0 0 10 6 4 0 0 0 0 0 0 0 0 ( 17) GLN18 0 0 0 0 7 9 10 3 0 0 0 0 0 0 0 0 ( 20) SER21 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 21) ARG22 0 0 0 18 5 0 0 0 0 0 0 0 0 0 0 0 ( 28) HIS29 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA53 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 prot.sequence kpvtLYdvaeyagvSYQtvSRvvnqashvsaktrekveaamaelnyipnrvAqqLAgkqllligvatsslalhapsqivaaiksradqlgasvvvsmversgveackaavhnllaqrvsgliinyplddqdaiaveaactnvpalfldvsdqtpinsiifshedgtrlgvehlvalghqqiallagplssvsarlrlagwhkyltrnqiqpiaeregdwsamsgfqqtmqmlnegivptamlvandqmalgamraitesglrvgadisvvgyddtedsscyipplttikqdfrllgqtsvdrllqlsqgqavkgnqllpvslvkrktt/kpvtLYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrvAqqLAgkqllligvatsslalhapsqivaaiksradqlgasvvvsmversgveackaavhnllaqrvsgliinyplddqdaiaveaactnvpalfldvsdqtpinsiifshedgtrlgvehlvalghqqiallagplssvsarlrlagwhkyltrnqiqpiaeregdwsamsgfqqtmqmlnegivptamlvandqmalgamraitesglrvgadisvvgyddtedsscyipplttikqdfrllgqtsvdrllqlsqgqavkgnqllpvslvkrkttla >2pfj_A:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF T7 ENDO I RESOLVASE IN COMPLEX WITH A HOLLIDAY JUNCTION organism=Enterobacteria phage T7 DNA sequence DT(Z1):DA(Y29) DA(Z2):DT(Y28) DG(Z3):DC(Y27) DC(Z4):DG(Y26) DA(Z5):DT(Y25) DG(Z6):DC(Y24) DC(Z7):DG(Y23) DC(Z8):DG(Y22) DT(Z9):DG(Y21) DG(Z10):DG(Y20) DA(Z11):DA(Y19) DG(Z12):DA(Y18) DC(Z13):DC(Y17) DT(Z14):DT(Y14) DG(Z17):DG(Y13) DC(Z18):DT(Y12) DT(Z19):DT(Y11) DC(Z20):DC(Y10) DA(Z21):DC(Y9) DA(Z22):DT(Y8) DC(Z23):DG(Y7) DT(Z24):DA(Y6) DC(Z25):DG(Y5) DA(Z26):DT(Y4) DA(Z27):DT(Y3) DC(Z28):DG(Y2) DT(Z29):DA(Y1) chainA ( 53) LEU69 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 ( 79) SER95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 83) THR99 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 86) TYR102 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) TYR109 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgledkvskqleskgikfeyeewkvpyvipasnhtytpdfllpngifvetagLwesddrkkhllireqhpeldirivfSssrTklYkgsptsYgefcekhgikfadklipaewikepkkevpfdrlkrk >2pfj_AB:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF T7 ENDO I RESOLVASE IN COMPLEX WITH A HOLLIDAY JUNCTION organism=Enterobacteria phage T7 DNA sequence DT(Z1):DA(Y29) DA(Z2):DT(Y28) DG(Z3):DC(Y27) DC(Z4):DG(Y26) DA(Z5):DT(Y25) DG(Z6):DC(Y24) DC(Z7):DG(Y23) DC(Z8):DG(Y22) DT(Z9):DG(Y21) DG(Z10):DG(Y20) DA(Z11):DA(Y19) DG(Z12):DA(Y18) DC(Z13):DC(Y17) DT(Z14):DT(Y14) DG(Z17):DG(Y13) DC(Z18):DT(Y12) DT(Z19):DT(Y11) DC(Z20):DC(Y10) DA(Z21):DC(Y9) DA(Z22):DT(Y8) DC(Z23):DG(Y7) DT(Z24):DA(Y6) DC(Z25):DG(Y5) DA(Z26):DT(Y4) DA(Z27):DT(Y3) DC(Z28):DG(Y2) DT(Z29):DA(Y1) chainA ( 53) LEU69 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 ( 79) SER95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 83) THR99 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 86) TYR102 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) TYR109 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 54) LEU69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 80) SER95 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) SER96 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) THR99 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) TYR102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 prot.sequence sgledkvskqleskgikfeyeewkvpyvipasnhtytpdfllpngifvetagLwesddrkkhllireqhpeldirivfSssrTklYkgsptsYgefcekhgikfadklipaewikepkkevpfdrlkrk/rsgledkvskqleskgikfeyeewkvpyvipasnhtytpdfllpngifvetagLwesddrkkhllireqhpeldirivfSSsrTklYkgsptsygefcekhgikfadklipaewikepkkevpfdrlkrk >2pfq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=MANGANESE PROMOTES CATALYSIS IN A DNA POLYMERASE LAMBDA-DNA CRYSTAL organism=HOMO SAPIENS DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) DC(P7):DG(T5) chainA (221) LYS472 0 0 0 1 0 0 0 (254) TYR505 0 0 0 0 0 11 5 (259) ALA510 0 0 0 0 0 0 7 (262) ASN513 0 0 0 0 0 0 6 (263) ARG514 0 0 0 0 0 0 27 (266) ARG517 0 0 0 0 0 5 12 (278) GLU529 0 0 0 0 2 9 0 prot.sequence hnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgakvgpgrvlptptekdvfrllglpyrepaerdw >2pi0_ABCD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF IRF-3 BOUND TO THE PRDIII-I REGULATORY ELEMENT OF THE HUMAN INTERFERON-B ENHANCER organism=Homo sapiens DNA sequence DC(F2):DG(E33) DA(F3):DT(E32) DC(F4):DG(E31) DT(F5):DA(E30) DT(F6):DA(E29) DT(F7):DA(E28) DC(F8):DG(E27) DA(F9):DT(E26) DC(F10):DG(E25) DT(F11):DA(E24) DT(F12):DA(E23) DC(F13):DG(E22) DT(F14):DA(E21) DC(F15):DG(E20) DC(F16):DG(E19) DC(F17):DG(E18) DT(F18):DA(E17) DT(F19):DA(E16) DT(F20):DA(E15) DC(F21):DG(E14) DA(F22):DT(E13) DG(F23):DC(E12) DT(F24):DA(E11) DT(F25):DA(E10) DT(F26):DA(E9) DT(F27):DA(E8) DC(F28):DG(E7) DC(F29):DG(E6) DT(F30):DA(E5) DA(F31):DT(E4) DT(F32):DA(E3) DG(F33):DC(E2) chainA ( 66) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 ( 67) ASN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 69) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 ( 70) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 ( 74) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 10 3 0 0 0 0 0 0 0 0 chainB ( 40) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 42) LEU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 ( 78) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 79) ASN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 ( 82) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ASN85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 37) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LEU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 3 5 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASN79 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) SER82 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 40) LEU42 0 0 0 0 0 0 0 0 0 0 2 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG78 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASN79 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG81 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) SER82 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA83 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ASN85 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ARG86 0 0 13 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kprilpwlvsqldlgqlegvawvnksrtrfripwkHglrgifqawaeatgayvpgrdkpdlptwkRNfRSalnRkeglrlaedrskdphdphkiyefv/mgtpkprilpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSalNRkeglrlaedrskdphdphkiyefvns/pkprilpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSalnrkeglrlaedrskdphdphkiyefv/tpkprilpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdagifqawaeatgayvpgrdkpdlptwkRNfRSAlNRkeglrlaedrskdphdphkiyefvn >2pi0_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF IRF-3 BOUND TO THE PRDIII-I REGULATORY ELEMENT OF THE HUMAN INTERFERON-B ENHANCER organism=Homo sapiens DNA sequence DC(E2):DG(F33) DA(E3):DT(F32) DT(E4):DA(F31) DA(E5):DT(F30) DG(E6):DC(F29) DG(E7):DC(F28) DA(E8):DT(F27) DA(E9):DT(F26) DA(E10):DT(F25) DA(E11):DT(F24) DC(E12):DG(F23) DT(E13):DA(F22) DG(E14):DC(F21) DA(E15):DT(F20) DA(E16):DT(F19) DA(E17):DT(F18) DG(E18):DC(F17) DG(E19):DC(F16) DG(E20):DC(F15) DA(E21):DT(F14) DG(E22):DC(F13) DA(E23):DT(F12) DA(E24):DT(F11) DG(E25):DC(F10) DT(E26):DA(F9) DG(E27):DC(F8) DA(E28):DT(F7) DA(E29):DT(F6) DA(E30):DT(F5) DG(E31):DC(F4) DT(E32):DA(F3) DG(E33):DC(F2) chainB ( 40) HIS40 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) LEU42 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 0 0 0 0 0 0 0 0 1 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ASN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG81 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ASN85 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mgtpkprilpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSalNRkeglrlaedrskdphdphkiyefvns >2pi4_A:DNA/RNA_polymerases; title=T7RNAP COMPLEXED WITH A PHI10 PROTEIN AND INITIATING GTPS. organism=Enterobacteria phage T7 DNA sequence DT(P101):DA(T22) DA(P102):DT(T21) DA(P103):DT(T20) DT(P104):DA(T19) DA(P105):DT(T18) DC(P106):DG(T17) DG(P107):DC(T16) DA(P108):DT(T15) DC(P109):DG(T14) DT(P110):DA(T13) DC(P111):DG(T12) DA(P112):DT(T11) DC(P113):DG(T10) DT(P114):DA(T9) chainA ( 75) ARG96 16 11 1 0 0 0 0 0 0 0 0 0 0 0 ( 77) LYS98 0 0 0 4 10 1 0 0 0 0 0 0 0 0 (114) GLN135 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (118) SER139 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (185) LYS206 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (210) ARG231 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (216) VAL237 0 0 0 0 0 0 0 0 0 0 0 0 22 0 (219) ASP240 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (725) ARG746 0 0 0 0 0 0 0 0 0 0 10 14 0 0 (727) ASN748 0 0 0 0 0 0 4 1 0 0 0 0 0 0 (735) ARG756 0 0 0 0 0 0 1 9 11 1 0 0 0 0 (737) GLN758 0 0 0 0 0 0 0 0 0 4 5 0 0 0 (739) THR760 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (740) ILE761 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (741) ASN762 0 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence iakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmfplittllpkmiarindwfeevkakRgKrptafqflqeikpeavayitikttlacltsadnttvQavaSaigraiedearfgrirdleakhfkknveeqlnkrvghvykkafmqvveadmlskgllggeawsswhKedsihvgvrciemliestgmvslhRqnagvVgqDsetielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiereelpmkpedidmnpealtawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvtvtdentgeisekvklgtkalagqwlaygvtrsvtkrsvmtlaygskefgfrqqvledtiqpaidsgkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtRlNlmflgqfRlQpTINtnkdseidahkqesgiapnfvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa >2pi5_A:DNA/RNA_polymerases; title=T7 RNA POLYMERASE COMPLEXED WITH A PHI10 PROMOTER organism=Enterobacteria phage T7 DNA sequence DT(P101):DA(T22) DA(P102):DT(T21) DA(P103):DT(T20) DT(P104):DA(T19) DA(P105):DT(T18) DC(P106):DG(T17) DG(P107):DC(T16) DA(P108):DT(T15) DC(P109):DG(T14) DT(P110):DA(T13) DC(P111):DG(T12) DA(P112):DT(T11) DC(P113):DG(T10) chainA ( 75) ARG96 14 11 7 0 0 0 0 0 0 0 0 0 0 ( 77) LYS98 0 0 0 4 5 0 0 0 0 0 0 0 0 (210) ARG231 0 0 0 0 0 0 0 0 0 0 0 1 0 (216) VAL237 0 0 0 0 0 0 0 0 0 0 0 0 17 (219) ASP240 0 0 0 0 0 0 0 0 0 0 0 0 8 (725) ARG746 0 0 0 0 0 0 0 0 0 0 8 15 0 (727) ASN748 0 0 0 0 0 0 7 1 0 0 0 0 0 (735) ARG756 0 0 0 0 0 0 0 5 12 10 0 0 0 (737) GLN758 0 0 0 0 0 0 0 0 0 9 11 0 0 (739) THR760 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence iakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmfplittllpkmiarindwfeevkakRgKrptafqflqeikpeavayitikttlacltsadnttvqavasaigraiedearfgrirdleakhfkknveeqlnkrvghvykkafmqvveadmlskgllggeawsswhkedsihvgvrciemliestgmvslhRqnagvVgqDsetielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiereelpmkpedidmnpealtawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvtvtdentgeisekvklgtkalagqwlaygvtrsvtkrsvmtlaygskefgfrqqvledtiqpaidsgkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtRlNlmflgqfRlQpTintnkdseidahkqesgiapnfvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa >2pjr_A:?;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HELICASE PRODUCT COMPLEX organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(C13) DT(C14) DT(C15) DT(C16) DT(C17) chainA ( 58) PHE64 0 0 0 13 0 ( 59) THR65 0 0 0 2 0 ( 87) HIS93 0 0 0 0 7 (186) PHE192 0 0 0 0 12 (221) ASP227 0 0 0 12 0 (251) TYR257 0 0 0 30 0 (253) TRP259 0 52 12 0 0 (254) ARG260 0 0 4 3 5 (353) ARG359 7 5 0 0 0 (379) LYS385 0 0 0 0 1 (381) TYR387 0 0 0 0 1 prot.sequence qllahlnkeqqeavrttegpllimagagsgktrvlthriaylmaekhvapwnilaitFTnkaaremrervqsllggaaedvwistfHsmcvrilrrdidriginrnfsildptdqlsvmktilkeknidpkkfeprtilgtisaaknellppeqfakrastyyekvvsdvyqeyqqrllrnhsldFddlimttiqlfdrvpdvlhyyqykfqyihideyqDtnraqytlvkklaerfqnicavgdadqsiYrWRgadiqnilsferdypnakvilleqnyrstkrilqaaneviehnvnrkpkriwtenpegkpilyyeamneadeaqfvagrireavergerryrdfavlyRtnaqsrvmeemllkanipyqivgglKfYdrkeikdilaylrvianpdddlsllriinvpkrgigastidklvryaadhelslfealgelemiglgakaagalaafrsqleqwtqlqeyvsvtelveevldksgyremlkaertieaqsrlenldeflsvtkhfenvsddksliafltdlalisdldeld >2pjr_AB:?;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HELICASE PRODUCT COMPLEX organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(C13) DT(C14) DT(C15) DT(C16) DT(C17) chainA ( 58) PHE64 0 0 0 13 0 ( 59) THR65 0 0 0 2 0 ( 87) HIS93 0 0 0 0 7 (186) PHE192 0 0 0 0 12 (221) ASP227 0 0 0 12 0 (251) TYR257 0 0 0 30 0 (253) TRP259 0 52 12 0 0 (254) ARG260 0 0 4 3 5 (353) ARG359 7 5 0 0 0 (379) LYS385 0 0 0 0 1 (381) TYR387 0 0 0 0 1 chainB ( 10) HIS565 0 6 0 0 0 ( 13) LYS568 0 0 0 3 0 ( 32) HIS587 21 0 0 0 0 ( 34) ARG589 13 0 0 0 0 prot.sequence qllahlnkeqqeavrttegpllimagagsgktrvlthriaylmaekhvapwnilaitFTnkaaremrervqsllggaaedvwistfHsmcvrilrrdidriginrnfsildptdqlsvmktilkeknidpkkfeprtilgtisaaknellppeqfakrastyyekvvsdvyqeyqqrllrnhsldFddlimttiqlfdrvpdvlhyyqykfqyihideyqDtnraqytlvkklaerfqnicavgdadqsiYrWRgadiqnilsferdypnakvilleqnyrstkrilqaaneviehnvnrkpkriwtenpegkpilyyeamneadeaqfvagrireavergerryrdfavlyRtnaqsrvmeemllkanipyqivgglKfYdrkeikdilaylrvianpdddlsllriinvpkrgigastidklvryaadhelslfealgelemiglgakaagalaafrsqleqwtqlqeyvsvtelveevldksgyremlkaertieaqsrlenldeflsvtkhfenvsddksliafltdlalisdldeld/gdavmlmtlHaaKglefpvvfligmeegifpHnRsledddemeeerrlayvgitraeeelvltsaqmrtlfgniqmdppsrflneipahlletas >2pjr_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=HELICASE PRODUCT COMPLEX organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(C13) DT(C14) DT(C15) DT(C16) DT(C17) chainB ( 10) HIS565 0 6 0 0 0 ( 13) LYS568 0 0 0 3 0 ( 32) HIS587 21 0 0 0 0 ( 34) ARG589 13 0 0 0 0 prot.sequence gdavmlmtlHaaKglefpvvfligmeegifpHnRsledddemeeerrlayvgitraeeelvltsaqmrtlfgniqmdppsrflneipahlletas >2ppb_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNAP POLYMERASE ELONGATION COMPLEX WITH THE NTP SUBSTRATE ANALOG AND ANTIBIOTIC STREPTOLYDIGIN organism=? DNA sequence DA(I3):DT(G13) DC(I4):DG(G12) DG(I5):DC(G11) DC(I6):DG(G10) DC(I7):DG(G9) DA(I8):DT(G8) DG(I9):DC(G7) DA(I10):DT(G6) DC(I11):DG(G5) DA(I12):DT(G4) DG(I13):DC(G3) DG(I14):DC(G2) DG(I15):DC(G1) chainC (422) ARG422 18 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeedkgkgglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglaskr >2ppb_CD: title=CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNAP POLYMERASE ELONGATION COMPLEX WITH THE NTP SUBSTRATE ANALOG AND ANTIBIOTIC STREPTOLYDIGIN organism=THERMUS THERMOPHILUS DNA sequence DC(G1):DG(I15) DC(G2):DG(I14) DC(G3):DG(I13) DT(G4):DA(I12) DG(G5):DC(I11) DT(G6):DA(I10) DC(G7):DG(I9) DT(G8):DA(I8) DG(G9):DC(I7) DG(G10):DC(I6) DC(G11):DG(I5) DG(G12):DC(I4) DT(G13):DA(I3) chainC (422) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 18 chainD (303) ALA487 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeedkgkgglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglaskr/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrArrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmrtfhtditqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkeavea >2ppb_MN: title=CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNAP POLYMERASE ELONGATION COMPLEX WITH THE NTP SUBSTRATE ANALOG AND ANTIBIOTIC STREPTOLYDIGIN organism=THERMUS THERMOPHILUS DNA sequence DA(Z3):DT(X13) DC(Z4):DG(X12) DG(Z5):DC(X11) DC(Z6):DG(X10) DC(Z7):DG(X9) DA(Z8):DT(X8) DG(Z9):DC(X7) DA(Z10):DT(X6) DC(Z11):DG(X5) DA(Z12):DT(X4) DG(Z13):DC(X3) DG(Z14):DC(X2) DG(Z15):DC(X1) chainM (422) ARG422 26 0 0 0 0 0 0 0 0 0 0 0 0 (423) ALA423 2 0 0 0 0 0 0 0 0 0 0 0 0 chainN prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeedkgkgglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRAgfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglaskr/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdILsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmrtfhtditqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkeavea >2pqu_AC:Eukaryotic_type_KH-domain_KH-domain_type_I; title=CRYSTAL STRUCTURE OF KH1 DOMAIN OF HUMAN PCBP2 COMPLEXED TO SINGLE- STRANDED 12-MER TELOMERIC DNA organism=Homo sapiens DNA sequence DA(E498) DA(E499) DC(E500) DC(E501) DC(E502) DT(E503) DA(E504) DA(E505) DC(E506) DC(E507) DC(E508) DT(E509) chainA ( 16) VAL25 0 0 0 0 0 0 0 0 0 1 0 0 ( 18) SER27 0 0 0 0 0 0 0 0 4 0 0 0 ( 20) ILE29 0 0 0 0 0 0 0 0 0 4 7 0 ( 22) LYS31 0 0 0 0 0 2 8 3 1 0 0 0 ( 27) VAL36 0 0 0 0 0 0 0 0 0 0 3 0 ( 31) ARG40 0 0 0 0 0 0 0 0 0 0 5 2 ( 39) ASN48 0 0 0 0 0 0 0 0 0 0 0 3 ( 40) ILE49 0 0 0 0 0 0 0 0 0 0 8 0 ( 42) GLU51 0 0 0 0 0 0 0 0 0 0 1 7 ( 48) ARG57 0 0 0 0 0 0 0 0 0 11 1 0 chainC ( 16) SER27 0 0 4 0 0 0 0 0 0 0 0 0 ( 18) ILE29 0 0 0 6 12 0 0 0 0 0 0 0 ( 20) LYS31 0 0 1 0 0 0 0 0 0 0 0 0 ( 25) VAL36 0 0 0 0 3 0 0 0 0 0 0 0 ( 29) ARG40 0 0 0 0 5 5 0 0 0 0 0 0 ( 37) ASN48 0 0 0 0 0 5 1 0 0 0 0 0 ( 38) ILE49 0 0 0 0 9 0 0 0 0 0 0 0 ( 40) GLU51 0 0 0 0 0 3 0 0 0 0 0 0 ( 42) ASN53 2 6 0 6 0 0 0 0 0 0 0 0 ( 46) ARG57 0 0 0 11 2 0 0 0 0 0 0 0 prot.sequence knvtltirllmhgkeVgSiIgKkgesVkkmReesgariNIsEgncpeRiitlagptnaifkafamiidklee/vtltirllmhgkevgSiIgKkgesVkkmReesgariNIsEgNcpeRiitlagptnaifkafamiidklee >2pqu_C:Eukaryotic_type_KH-domain_KH-domain_type_I; title=CRYSTAL STRUCTURE OF KH1 DOMAIN OF HUMAN PCBP2 COMPLEXED TO SINGLE- STRANDED 12-MER TELOMERIC DNA organism=Homo sapiens DNA sequence DA(E498) DA(E499) DC(E500) DC(E501) DC(E502) DT(E503) DA(E504) DA(E505) DC(E506) DC(E507) DC(E508) DT(E509) chainC ( 16) SER27 0 0 4 0 0 0 0 0 0 0 0 0 ( 18) ILE29 0 0 0 6 12 0 0 0 0 0 0 0 ( 20) LYS31 0 0 1 0 0 0 0 0 0 0 0 0 ( 25) VAL36 0 0 0 0 3 0 0 0 0 0 0 0 ( 29) ARG40 0 0 0 0 5 5 0 0 0 0 0 0 ( 37) ASN48 0 0 0 0 0 5 1 0 0 0 0 0 ( 38) ILE49 0 0 0 0 9 0 0 0 0 0 0 0 ( 40) GLU51 0 0 0 0 0 3 0 0 0 0 0 0 ( 42) ASN53 2 6 0 6 0 0 0 0 0 0 0 0 ( 46) ARG57 0 0 0 11 2 0 0 0 0 0 0 0 prot.sequence vtltirllmhgkevgSiIgKkgesVkkmReesgariNIsEgNcpeRiitlagptnaifkafamiidklee >2prt_A:C2H2_and_C2HC_zinc_fingers; title=STRUCTURE OF THE WILMS TUMOR SUPPRESSOR PROTEIN ZINC FINGER DOMAIN BOUND TO DNA organism=Homo sapiens DNA sequence DC(B1):DG(C62) DG(B2):DC(C61) DC(B3):DG(C60) DG(B4):DC(C59) DG(B5):DC(C58) DG(B6):DC(C57) DG(B7):DC(C56) DG(B8):DC(C55) DC(B9):DG(C54) DG(B10):DC(C53) DT(B11):DA(C52) DC(B12):DG(C51) chainA ( 46) ARG366 0 0 0 0 0 0 0 0 7 15 14 0 ( 48) ASP368 0 0 0 0 0 0 0 0 0 1 9 1 ( 52) ARG372 0 0 0 0 0 0 1 9 5 0 0 0 ( 74) ARG394 0 0 0 0 0 10 11 2 0 0 0 0 ( 76) ASP396 0 0 0 0 0 0 1 7 2 0 0 0 ( 77) HIS397 0 0 0 0 20 12 0 0 0 0 0 0 (104) ARG424 0 0 12 14 5 0 0 0 0 0 0 0 (106) ASP426 0 0 0 1 7 0 0 0 0 0 0 0 (107) GLU427 0 2 3 0 0 0 0 0 0 0 0 0 (110) ARG430 2 7 6 0 0 0 0 0 0 0 0 0 prot.sequence rpfmcaypgcnkryfklshlqmhsrkhtgekpyqcdfkdcerrfsRsDqlkRhqrrhtgvkpfqcktcqrkfsRsDHlkthtrthtgekpfscrwpscqkkfaRsDElvRhhnmh >2pua_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES organism=Escherichia coli DNA sequence DT(B699) DA(B700) DC(B701) DG(B702) DC(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DG(B712) DC(B713) DG(B714) DT(B715) chainA ( 13) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) THR16 0 0 0 3 6 3 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG26 0 0 26 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) LEU54 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 54) LYS55 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 prot.sequence atikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgpleantgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >2pub_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES organism=Escherichia coli DNA sequence DT(B699) DA(B700) DC(B701) DG(B702) DC(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DG(B712) DC(B713) DG(B714) DT(B715) chainA ( 12) SER14 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 2 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 23 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgpleantgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >2puc_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES organism=Escherichia coli DNA sequence DT(B699) DA(B700) DC(B701) DG(B702) DC(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DG(B712) DC(B713) DG(B714) DT(B715) chainA ( 12) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 2 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 24 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgpleantgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >2pud_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES organism=Escherichia coli DNA sequence DT(B699) DA(B700) DC(B701) DG(B702) DC(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DG(B712) DC(B713) DG(B714) DT(B715) chainA ( 12) SER14 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 2 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 24 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgpleantgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >2pue_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES organism=Escherichia coli DNA sequence DT(B699) DA(B700) DC(B701) DG(B702) DC(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DG(B712) DC(B713) DG(B714) DT(B715) chainA ( 12) SER14 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 2 5 3 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 21 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 1 11 4 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgpleqntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >2puf_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES organism=Escherichia coli DNA sequence DT(B699) DA(B700) DC(B701) DG(B702) DC(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DG(B712) DC(B713) DG(B714) DT(B715) chainA ( 12) SER14 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 5 8 2 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 20 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgpleqntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >2pug_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES organism=Escherichia coli DNA sequence DT(B699) DA(B700) DC(B701) DG(B702) DC(B703) DA(B704) DA(B705) DA(B706) DC(B707) DG(B708) DT(B709) DT(B710) DT(B711) DG(B712) DC(B713) DG(B714) DT(B715) chainA ( 12) SER14 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR16 0 0 0 2 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 24 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU54 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 prot.sequence tikdvakranvStTtvshvinktRfvaeetrnavwaaikelhyspsavarsLKvnhtksigllatsseaayfaeiieavekncfqkgytlilgnawnnlekqraylsmmaqkrvdgllvmcseypepllamleeyrhipmvvmdwgeakadftdavidnafeggymagrylierghreigvipgpleqntgagrlagfmkameeamikvpeswivqgdfepesgyramqqilsqphrptavfcggdimamgalcaademglrvpqdvsligydnvrnaryftpalttihqpkdslgetafnmlldrivnkreepqsievhprlierrsvadgpfrdyr >2pvi_A:Restriction_endonuclease-like; title=PVUII ENDONUCLEASE COMPLEXED TO AN IODINATED COGNATE DNA organism=Proteus vulgaris DNA sequence DG(D3):DC(C14) DA(D4):DT(C13) DC(D5):DG(C12) DC(D6):DG(C11) DA(D7):DT(C10) DG(D8):C38(C9) C38(D9):DG(C8) DT(D10):DA(C7) DG(D11):DC(C6) DG(D12):DC(C5) DT(D13):DA(C4) DC(D14):DG(C3) chainA ( 33) ASP34 0 0 0 0 0 6 2 0 0 0 0 0 ( 80) SER81 0 0 0 0 0 0 0 8 2 0 0 0 ( 82) HIS83 0 0 0 0 0 0 5 0 0 0 0 0 ( 83) HIS84 0 0 0 0 0 5 10 4 0 0 0 0 (139) ASN140 0 0 0 0 0 0 0 10 13 0 0 0 (140) ASN141 0 0 0 0 0 0 0 20 8 0 0 0 (142) LYS143 0 0 0 0 0 0 0 0 9 6 0 0 prot.sequence shpdlnkllelwphiqeyqdlalkhgindifqDnggkllqvllitgltvlpgragndavdnagqeyelksinidlTkgfSthHhmnpviiakarqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy >2pvi_AB:Restriction_endonuclease-like; title=PVUII ENDONUCLEASE COMPLEXED TO AN IODINATED COGNATE DNA organism=Proteus vulgaris DNA sequence DG(D3):DC(C14) DA(D4):DT(C13) DC(D5):DG(C12) DC(D6):DG(C11) DA(D7):DT(C10) DG(D8):C38(C9) C38(D9):DG(C8) DT(D10):DA(C7) DG(D11):DC(C6) DG(D12):DC(C5) DT(D13):DA(C4) DC(D14):DG(C3) chainA ( 33) ASP34 0 0 0 0 0 6 2 0 0 0 0 0 ( 80) SER81 0 0 0 0 0 0 0 8 2 0 0 0 ( 82) HIS83 0 0 0 0 0 0 5 0 0 0 0 0 ( 83) HIS84 0 0 0 0 0 5 10 4 0 0 0 0 (139) ASN140 0 0 0 0 0 0 0 10 13 0 0 0 (140) ASN141 0 0 0 0 0 0 0 20 8 0 0 0 (142) LYS143 0 0 0 0 0 0 0 0 9 6 0 0 chainB ( 33) ASP34 0 0 0 0 0 2 4 0 0 0 0 0 ( 80) SER81 0 0 0 2 8 0 0 0 0 0 0 0 ( 82) HIS83 0 0 0 0 0 5 0 0 0 0 0 0 ( 83) HIS84 0 0 0 0 4 12 6 0 0 0 0 0 (139) ASN140 0 0 0 12 10 0 0 0 0 0 0 0 (140) ASN141 0 0 0 8 19 0 0 0 0 0 0 0 (142) LYS143 0 0 8 10 0 0 0 0 0 0 0 0 prot.sequence shpdlnkllelwphiqeyqdlalkhgindifqDnggkllqvllitgltvlpgragndavdnagqeyelksinidlTkgfSthHhmnpviiakarqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy/shpdlnkllelwphiqeyqdlalkhgindifqDnggkllqvllitgltvlpgragndavdnagqeyelksinidltkgfSthHhmnpviiakarqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy >2pxi_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-MONOFLUOROMETHYLENE TRIPHOSPHATE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 3 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >2pyj_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PHI29 DNA POLYMERASE COMPLEXED WITH PRIMER-TEMPLATE DNA AND INCOMING NUCLEOTIDE SUBSTRATES (TERNARY COMPLEX) organism=BACILLUS PHAGE PHI29 DNA sequence DT(Y8):DA(X9) DA(Y9):DT(X8) DA(Y10):DT(X7) DG(Y11):DC(X6) DC(Y12):DG(X5) DA(Y13):DT(X4) DG(Y14):DC(X3) DT(Y15):DA(X2) DC(Y16):DG(X1) chainA (494) LYS498 7 5 0 0 0 0 0 0 0 (523) ALA531 0 2 2 0 0 0 0 0 0 (547) LYS555 0 0 0 1 0 0 0 0 0 prot.sequence prkmyscafetttkvedcrvwaygymniedhseykignsldefmawvlkvqadlyfhnlkfagafiinwlerngfkwsadglpntyntiisrmgqwymidiclgykgkrkihtviydslkklpfpvkkiakdfkltvlkgdidyhkerpvgykitpeeyayikndiqiiaealliqfkqgldrmtagsdslkgfkdiittkkfkkvfptlslgldkevryayrggftwlndrfkekeigegmvfdvnslypaqmysrllpygepivfegkyvwdedyplhiqhircefelkegyiptiqikrsrfykgneylkssggeiadlwlsnvdlelmkehydlynveyisglkfkattglfkdfidkwtyikttsegaikqlaklmlnslygkfasnpdvtgkvpylkengalgfrlgeeetkdpvytpmgvfitawaryttitaaqacydriiycdtdsihltgteipdvikdivdpkklgywahestfkrakylrqKtyiqdiymkevvegspddytdikfsvkcAgmtdkikkevtfenfkvgfsrkmKpkpvqvpggvvlvdDtftik >2pyl_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PHI29 DNA POLYMERASE COMPLEXED WITH PRIMER-TEMPLATE DNA AND INCOMING NUCLEOTIDE SUBSTRATES (TERNARY COMPLEX) organism=Bacillus phage phi29 DNA sequence DA(Y6):TTP(A3204) DT(Y7):2DA(X11) DG(Y8):DC(X10) DT(Y9):DA(X9) DA(Y10):DT(X8) DA(Y11):DT(X7) DG(Y12):DC(X6) DC(Y13):DG(X5) DA(Y14):DT(X4) DG(Y15):DC(X3) DT(Y16):DA(X2) chainA ( 93) MET97 0 0 0 0 0 2 0 0 0 0 0 (245) ASP249 2 0 0 0 0 0 0 0 0 0 0 (248) SER252 2 0 0 0 0 0 0 0 0 0 0 (250) TYR254 1 0 0 0 0 0 0 0 0 0 0 (367) LYS371 5 0 0 0 0 0 0 0 0 0 0 (379) LYS383 18 0 0 0 0 0 0 0 0 0 0 (380) LEU384 4 0 0 0 0 0 0 0 0 0 0 (383) ASN387 26 0 0 0 0 0 0 0 0 0 0 (384) SER388 6 0 0 0 0 0 0 0 0 0 0 (386) TYR390 2 4 0 0 0 0 0 0 0 0 0 (454) ASP458 4 0 0 0 0 0 0 0 0 0 0 (494) LYS498 0 0 6 4 0 0 0 0 0 0 0 (527) ALA531 0 0 0 1 2 0 0 0 0 0 0 prot.sequence prkmyscafetttkvedcrvwaygymniedhseykignsldefmawvlkvqadlyfhnlkfagafiinwlerngfkwsadglpntyntiisrMgqwymidiclgykgkrkihtviydslkklpfpvkkiakdfkltvlkgdidyhkerpvgykitpeeyayikndiqiiaealliqfkqgldrmtagsdslkgfkdiittkkfkkvfptlslgldkevryayrggfTwlndrfkekeigegmvfdvnslypaqmysrllpygepivfegkyvwdedyplhiqhircefelkegyiptiqikrsrfykgneylkssggeiadlwlsnvdlelmkehydlynveyisglkfkattglfkdfidkwtyikttsegaikqlakLmlNSlYgkfasnpdvtgkvpylkengalgfrlgeeetkdpvytpmgvfitawaryttitaaqacydriiycDtdsihltgteipdvikdivdpkklgywahestfkrakylrqKtyiqdiymkevdgklvegspddytdikfsvkcAgmtdkikkevtfenfkvgfsrkmKpkpvqvpggvvlvddtftik >2pyo_A:Histone-fold; title=DROSOPHILA NUCLEOSOME CORE organism=DROSOPHILA MELANOGASTER DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera >2pyo_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=DROSOPHILA NUCLEOSOME CORE organism=DROSOPHILA MELANOGASTER DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 1) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 18) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 31) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 1) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aksrsnraglqfpvgrihrllrKgnyaervgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllpkkte/RkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/akrhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/gkaksrsnraglqfpvgrihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllpkkt/RkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >2pzs_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=PHI29 DNA POLYMERASE COMPLEXED WITH PRIMER-TEMPLATE DNA (POST- TRANSLOCATION BINARY COMPLEX) organism=Bacillus phage phi29 DNA sequence DA(U1) DC(U2) DA(U3) DC(U4) DG(U5) DT(U6) DA(U7) chainC ( 87) ASN91 0 1 0 0 0 0 0 ( 89) ILE93 0 9 4 0 0 0 0 ( 93) MET97 0 0 0 0 0 0 4 ( 98) MET102 0 5 0 0 0 0 0 (387) VAL399 0 0 10 0 0 0 0 (410) LYS422 0 0 5 0 0 0 0 prot.sequence prkmyscafetttkvedcrvwaygymniedhseykignsldefmawvlkvqadlyfhnlkfagafiinwlerngfkwsadglpntyNtIisrMgqwyMidiclgykgkrkihtviydslkklpfpvkkiakdfkltvlkgdidyhkerpvgykitpeeyayikndiqiiaealliqfkqgldrmtagsdslkgfkdiittkkfkkvfptlslgldkevryayrggftwlndrfkekeigegmvfdvnslypaqmysrllpygepivfegkyvwdedyplhiqhircefelkegyiptiqikeylkssggeiadlwlsnvdlelmkehydlynveyisglkfkattglfkdfidkwtyikttsegaikqlaklmlnslygkfasnpdVtgkvpylkengalgfrlgeeetKdpvytpmgvfitawaryttitaaqacydriiycdtdsihltgteipdvikdivdpkklgywahestfkrakylrqktyiqdiymkevdgklvegspddytdikfsvkcagmtdkikkevtfenfkvgfsrkmkpkpvqvpggvvlvddtftik >2q10_A:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE BCNI (WILD TYPE)-COGNATE DNA SUBSTRATE COMPLEX organism=BREVIBACILLUS CENTROSPORUS DNA sequence DA(C-4):DT(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DC(C0):DG(D0) DG(C1):DC(D-1) DG(C2):DC(D-2) DA(C3):DT(D-3) DG(C4):DC(D-4) DA(C5):DT(F6) DC(C6):DG(F5) DA(E-4):DT(F4) DA(E-3):DT(F3) DC(E-2):DG(F2) DC(E-1):DG(F1) DC(E0):DG(F0) DG(E1):DC(F-1) DG(E2):DC(F-2) DA(E3):DT(F-3) DG(E4):DC(F-4) chainA ( 30) ARG30 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASP32 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP33 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) SER71 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) THR74 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) HIS77 0 0 0 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) PHE111 0 0 0 0 3 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) THR113 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASP200 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) CYS202 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) HIS214 0 0 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) ARG216 0 0 0 16 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS219 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ARG221 0 0 0 0 0 17 10 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkiwskeevvnklheiknkgylsvptdmfRtDDgvvgqilerqfgvqennitlgdlgefelkgmrnrkakSNlTlfHkkpvagqtviqifnrfgyvkpssrnpevmkkklFtTikggrlnnlgltlnakhaseinlyyqdeylstwdlnlskieklvlvfaetigranspeeqfhftkaymlteinditslindgvlvmDlCidqdlskskgpHdRgpHlRipiskldklyrnierll >2q10_AB:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE BCNI (WILD TYPE)-COGNATE DNA SUBSTRATE COMPLEX organism=BREVIBACILLUS CENTROSPORUS DNA sequence DC(F-4):DG(E4) DT(F-3):DA(E3) DC(F-2):DG(E2) DC(F-1):DG(E1) DG(F0):DC(E0) DG(F1):DC(E-1) DG(F2):DC(E-2) DT(F3):DA(E-3) DT(F4):DA(E-4) DG(F5):DC(C6) DT(F6):DA(C5) DC(D-4):DG(C4) DT(D-3):DA(C3) DC(D-2):DG(C2) DC(D-1):DG(C1) DG(D0):DC(C0) DG(D1):DC(C-1) DG(D2):DC(C-2) DT(D3):DA(C-3) DT(D4):DA(C-4) chainA ( 30) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 32) ASP32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 ( 33) ASP33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 ( 71) SER71 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 0 0 ( 74) THR74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 ( 77) HIS77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 0 (111) PHE111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 3 0 0 0 0 (113) THR113 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 (200) ASP200 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 (202) CYS202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (214) HIS214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 0 0 (216) ARG216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 16 0 0 0 (219) HIS219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 (221) ARG221 0 0 0 0 0 0 0 0 0 0 0 0 0 10 17 0 0 0 0 0 chainB ( 30) ARG30 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASP32 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP33 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN38 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) SER71 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) THR74 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) HIS77 0 0 0 0 7 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) PHE111 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) THR113 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASP200 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) CYS202 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) HIS214 0 0 0 0 0 4 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) ARG216 0 0 0 0 16 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS219 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ARG221 0 0 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkiwskeevvnklheiknkgylsvptdmfRtDDgvvgqilerqfgvqennitlgdlgefelkgmrnrkakSNlTlfHkkpvagqtviqifnrfgyvkpssrnpevmkkklFtTikggrlnnlgltlnakhaseinlyyqdeylstwdlnlskieklvlvfaetigranspeeqfhftkaymlteinditslindgvlvmDlCidqdlskskgpHdRgpHlRipiskldklyrnierll/mkiwskeevvnklheiknkgylsvptdmfRtDDgvvgQilerqfgvqennitlgdlgefelkgmrnrkakSNlTlfHkkpvagqtviqifnrfgyvkpssrnpevmkkklFtTikggrlnnlgltlnakhaseinlyyqdeylstwdlnlskieklvlvfaetigranspeeqfhftkaymlteinditslindgvlvmDlCidqdlskskgpHdRgpHlRipiskldklyrnierll >2q2k_AB: title=STRUCTURE OF NUCLEIC-ACID BINDING PROTEIN organism=Staphylococcus aureus DNA sequence DA(F12) DG(F13) DT(F14) DA(F15) DT(F16) DA(F17) DA(F19) DC(F20) DA(F22) DG(F23) DT(F24) DA(F25) DT(F26) DA(F27) DT(F28) DA(F29) DC(F30) DT(F31) chainA ( 6) LEU9 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 8) LYS11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 chainB ( 4) LYS7 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 6) LEU9 0 0 0 0 0 0 0 0 0 0 2 1 3 0 0 0 0 0 ( 8) LYS11 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 prot.sequence ketkhLlKikkedypqifdflenvprgtktahirealrryieeig/ketKhLlKikkedypqifdflenvprgtktahirealrryieei >2q2k_B: title=STRUCTURE OF NUCLEIC-ACID BINDING PROTEIN organism=Staphylococcus aureus DNA sequence DA(F12) DG(F13) DT(F14) DA(F15) DT(F16) DA(F17) DA(F19) DC(F20) DA(F22) DG(F23) DT(F24) DA(F25) DT(F26) DA(F27) DT(F28) DA(F29) DC(F30) DT(F31) chainB ( 4) LYS7 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 6) LEU9 0 0 0 0 0 0 0 0 0 0 2 1 3 0 0 0 0 0 ( 8) LYS11 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 prot.sequence ketKhLlKikkedypqifdflenvprgtktahirealrryieei >2q2t_A:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=STRUCTURE OF CHLORELLA VIRUS DNA LIGASE-ADENYLATE BOUND TO A 5' PHOSPHORYLATED NICK organism=Paramecium bursaria Chlorella virus 1 DNA sequence DA(C22):DT(B21) DT(C23):DA(B20) DT(C24):DA(B19) DG(C25):DC(B18) DC(C26):DG(B17) DG(C27):DC(B16) DA(C28):DT(B15) DC(C29):DG(B14) OMC(C30):DG(B13) DC(C31):DG(B12) DC(D32):DG(B11) DA(D33):DT(B10) DC(D34):DG(B9) DT(D35):DA(B8) DA(D36):DT(B7) DT(D37):DA(B6) DC(D38):DG(B5) DG(D39):DC(B4) DG(D40):DC(B3) DA(D41):DT(B2) DA(D42):DT(B1) chainA ( 31) ILE31 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) PHE75 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) THR79 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (249) THR249 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 (286) PHE286 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence maitkpllaatleniedvqfpclatpkidgirsvkqtqmlsrtfkpiRnsvmnrlltellpegsdgeisiegatfqdttsavmtghkmynakfsyywfdyvtddplkkyidrvedmknyitvhphilehaqvkiiplipveinnitellqyerdvlskgfegvmirkpdgkykfgrstlkegillkmkqfkdaeatiismtalfkntntktkdnfgyskrsthksgkveedvmgsievdydgvvfsigTgfdadqrrdfwqnkesyigkmvkfkyfemgskdcpRFpvfigir >2q2u_D:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=STRUCTURE OF CHLORELLA VIRUS DNA LIGASE-PRODUCT DNA COMPLEX organism=Paramecium bursaria Chlorella virus 1 DNA sequence DT(K1):DA(L42) DT(K2):DA(L41) DC(K3):DG(L40) DC(K4):DG(L39) DG(K5):DC(L38) DA(K6):DT(L37) DT(K7):DA(L36) DA(K8):DT(L35) DG(K9):DC(L34) DT(K10):DA(L33) DG(K11):DC(L32) DG(K12):DC(L31) DG(K13):OMC(L30) DG(K14):DC(L29) DT(K15):DA(L28) DC(K16):DG(L27) DG(K17):DC(L26) DC(K18):DG(L25) DA(K19):DT(L24) DA(K20):DT(L23) DT(K21):DA(L22) chainD ( 31) ILE31 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 75) PHE75 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 79) THR79 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (249) THR249 0 0 0 0 0 0 0 0 2 8 1 0 0 0 0 0 0 0 0 0 0 (286) PHE286 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 prot.sequence maitkpllaatleniedvqfpclatpkidgirsvkqtqmlsrtfkpirnsvmnrlltellpegsdgeisiegatfqdttsavmtghkmynakfsyywfdyvtddplkkyidrvedmknyitvhphilehaqvkiiplipveinnitellqyerdvlskgfegvmirkpdgkykfgrstlkegillkmkqfkdaeatiismtalfkntntktkdnfgyskrsthksgkveedvmgsievdydgvvfsigTgfdadqrrdfwqnkesyigkmvkfkyfemgskdcprFpvfigir >2qby_A:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A HETERODIMER OF CDC6/ORC1 INITIATORS BOUND TO ORIGIN DNA (FROM S. SOLFATARICUS) organism=SULFOLOBUS SOLFATARICUS DNA sequence DT(D1):DA(C31) DG(D2):DC(C30) DT(D3):DA(C29) DA(D4):DT(C28) DA(D5):DT(C27) DA(D6):DT(C26) DT(D7):DA(C25) DT(D8):DA(C24) DT(D9):DA(C23) DC(D10):DG(C22) DC(D11):DG(C21) DT(D12):DA(C20) DA(D13):DT(C19) DC(D14):DG(C18) DG(D15):DC(C17) DT(D16):DA(C16) DT(D17):DA(C15) DT(D18):DA(C14) DC(D19):DG(C13) DA(D20):DT(C12) DT(D21):DA(C11) DC(D22):DG(C10) DT(D23):DA(C9) DG(D24):DC(C8) DA(D25):DT(C7) DA(D26):DT(C6) DA(D27):DT(C5) DA(D28):DT(C4) DT(D29):DA(C3) DC(D30):DG(C2) DT(D31):DA(C1) chainA (106) SER122 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 10 20 0 0 0 0 0 0 0 0 0 0 0 (321) SER344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (342) ARG365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 (345) LYS368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 prot.sequence ifinreyllpdyipdelphredqirkiasilaplyreekpnnifiygltgtgktavvkfvlsklhkkflgkfkhvyintrqidtpyrvladllesldvkvpftglSiaelyrrlvkavrdygsqvvivldeidafvkkynddilyklsrinsevnkisfigitndvkfvdlldprvksslseeeiifppynaeelediltkraqmafkpgvlpdnviklcaalaarehgdarraldllrvsgeiaermkdtkvkeeyvymakeeierdrvrdiiltlpfhsklvlmavvsisvsttgavyetylnickklgveavTqRrvSdiineldmvgiltakvvnrgRygKtkeiglavdkniivrsliesd >2qby_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A HETERODIMER OF CDC6/ORC1 INITIATORS BOUND TO ORIGIN DNA (FROM S. SOLFATARICUS) organism=SULFOLOBUS SOLFATARICUS DNA sequence DT(D1):DA(C31) DG(D2):DC(C30) DT(D3):DA(C29) DA(D4):DT(C28) DA(D5):DT(C27) DA(D6):DT(C26) DT(D7):DA(C25) DT(D8):DA(C24) DT(D9):DA(C23) DC(D10):DG(C22) DC(D11):DG(C21) DT(D12):DA(C20) DA(D13):DT(C19) DC(D14):DG(C18) DG(D15):DC(C17) DT(D16):DA(C16) DT(D17):DA(C15) DT(D18):DA(C14) DC(D19):DG(C13) DA(D20):DT(C12) DT(D21):DA(C11) DC(D22):DG(C10) DT(D23):DA(C9) DG(D24):DC(C8) DA(D25):DT(C7) DA(D26):DT(C6) DA(D27):DT(C5) DA(D28):DT(C4) DT(D29):DA(C3) DC(D30):DG(C2) DT(D31):DA(C1) chainA (106) SER122 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 10 20 0 0 0 0 0 0 0 0 0 0 0 (321) SER344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (342) ARG365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 (345) LYS368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 chainB (313) SER329 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) ARG331 0 0 0 0 0 0 0 0 3 11 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ASN352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) ARG355 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (343) VAL359 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ifinreyllpdyipdelphredqirkiasilaplyreekpnnifiygltgtgktavvkfvlsklhkkflgkfkhvyintrqidtpyrvladllesldvkvpftglSiaelyrrlvkavrdygsqvvivldeidafvkkynddilyklsrinsevnkisfigitndvkfvdlldprvksslseeeiifppynaeelediltkraqmafkpgvlpdnviklcaalaarehgdarraldllrvsgeiaermkdtkvkeeyvymakeeierdrvrdiiltlpfhsklvlmavvsisvsttgavyetylnickklgveavTqRrvSdiineldmvgiltakvvnrgRygKtkeiglavdkniivrsliesd/knpkvfidplsvfkeipfredilrdaaiairyfvknevkfsnlflgltgtgktfvskyifneieevkkedeeykdvkqayvncrevggtpqavlsslagkltgfsvpkhginlgeyidkikngtrniraiiyldevdtlvkrrggdivlyqllrsdanisvimisndinvrdymeprvlsslgpsvifkpydaeqlkfilskyaeyglikgtyddeilsyiaaisakehgdarkavnllfraaqlasgggiirkehvdkaivdyeqerlieavkalpfhyklalrsliesedvmsahkmytdlcnkfkqkplSyRrfsdiiseldmfgivkiriiNrgRaggVkkyalvedkekvlralnetfedsis >2qby_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF A HETERODIMER OF CDC6/ORC1 INITIATORS BOUND TO ORIGIN DNA (FROM S. SOLFATARICUS) organism=SULFOLOBUS SOLFATARICUS DNA sequence DT(D1):DA(C31) DG(D2):DC(C30) DT(D3):DA(C29) DA(D4):DT(C28) DA(D5):DT(C27) DA(D6):DT(C26) DT(D7):DA(C25) DT(D8):DA(C24) DT(D9):DA(C23) DC(D10):DG(C22) DC(D11):DG(C21) DT(D12):DA(C20) DA(D13):DT(C19) DC(D14):DG(C18) DG(D15):DC(C17) DT(D16):DA(C16) DT(D17):DA(C15) DT(D18):DA(C14) DC(D19):DG(C13) DA(D20):DT(C12) DT(D21):DA(C11) DC(D22):DG(C10) DT(D23):DA(C9) DG(D24):DC(C8) DA(D25):DT(C7) DA(D26):DT(C6) DA(D27):DT(C5) DA(D28):DT(C4) DT(D29):DA(C3) DC(D30):DG(C2) DT(D31):DA(C1) chainB (313) SER329 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) ARG331 0 0 0 0 0 0 0 0 3 11 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ASN352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) ARG355 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (343) VAL359 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence knpkvfidplsvfkeipfredilrdaaiairyfvknevkfsnlflgltgtgktfvskyifneieevkkedeeykdvkqayvncrevggtpqavlsslagkltgfsvpkhginlgeyidkikngtrniraiiyldevdtlvkrrggdivlyqllrsdanisvimisndinvrdymeprvlsslgpsvifkpydaeqlkfilskyaeyglikgtyddeilsyiaaisakehgdarkavnllfraaqlasgggiirkehvdkaivdyeqerlieavkalpfhyklalrsliesedvmsahkmytdlcnkfkqkplSyRrfsdiiseldmfgivkiriiNrgRaggVkkyalvedkekvlralnetfedsis >2qhb_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF NGTRF COMPLEXED WITH TELOMERIC DNA organism=Nicotiana glutinosa DNA sequence DC(F8):DG(E7) DC(F9):DG(E6) DC(F10):DG(E5) DT(F11):DA(E4) DA(F12):DT(E3) DA(F13):DT(E2) DA(F14):DT(E1) chainA ( 43) TYR616 0 0 0 0 4 5 0 ( 44) VAL617 0 1 2 1 1 0 0 ( 47) LYS620 0 3 8 2 0 0 0 ( 48) ASP621 12 6 0 0 0 0 0 ( 51) LYS624 3 4 0 0 0 0 0 prot.sequence rrirrpfsvaevealveavehlgtgrwrdvkmrafdnadhrtYVdlKDkwKtlvhtasiapqqrrgepvpqdlldrvlaahaywsq >2qk9_A:Ribonuclease_H-like; title=HUMAN RNASE H CATALYTIC DOMAIN MUTANT D210N IN COMPLEX WITH 18-MER RNA/DNA HYBRID organism=Homo sapiens DNA sequence DG(C19) DG(C20) DA(C21) DA(C22) DT(C23) DC(C24) DA(C25) DG(C26) DG(C27) DT(C28) DG(C29) DT(C30) DC(C31) DG(C32) DC(C33) DA(C34) DC(C35) DT(C36) chainA ( 18) ASN151 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 49) ASN182 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 ( 50) GLN183 0 0 0 0 0 0 0 0 0 0 12 3 0 0 0 0 0 0 ( 80) PHE213 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 88) TRP221 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (100) SER233 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 prot.sequence shmgdfvvvytdgccssNgrrrpragigvywgpghplnvgirlpgrqtNQraeihaackaieqaktqninklvlytnsmFtingitnWvqgwkkngwktSagkevinkedfvalerltqgmdiqwmhvpghsgfigneeadrlaregakqsed >2qkb_A:Ribonuclease_H-like; title=HUMAN RNASE H CATALYTIC DOMAIN MUTANT D210N IN COMPLEX WITH 20-MER RNA/DNA HYBRID organism=Homo sapiens DNA sequence DG(D21) DG(D22) DA(D23) DA(D24) DT(D25) DC(D26) DA(D27) DG(D28) DG(D29) DT(D30) DG(D31) DT(D32) DC(D33) DG(D34) DC(D35) DA(D36) DC(D37) DT(D38) DC(D39) DT(D40) chainA ( 19) ASN151 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 21) ARG153 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN182 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 ( 51) GLN183 0 0 0 0 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 ( 81) PHE213 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 89) TRP221 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (101) SER233 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 prot.sequence gshmgdfvvvytdgccssNgRrrpragigvywgpghplnvgirlpgrqtNQraeihaackaieqaktqninklvlytnsmFtingitnWvqgwkkngwktSagkevinkedfvalerltqgmdiqwmhvpghsgfigneeadrlaregakqs >2qkb_AB:Ribonuclease_H-like; title=HUMAN RNASE H CATALYTIC DOMAIN MUTANT D210N IN COMPLEX WITH 20-MER RNA/DNA HYBRID organism=Homo sapiens DNA sequence DG(D21) DG(D22) DA(D23) DA(D24) DT(D25) DC(D26) DA(D27) DG(D28) DG(D29) DT(D30) DG(D31) DT(D32) DC(D33) DG(D34) DC(D35) DA(D36) DC(D37) DT(D38) DC(D39) DT(D40) chainA ( 19) ASN151 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 21) ARG153 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN182 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 ( 51) GLN183 0 0 0 0 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 ( 81) PHE213 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 89) TRP221 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (101) SER233 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 chainB ( 18) ASN151 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ASN182 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLN183 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) PHE213 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) TRP221 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) SER233 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gshmgdfvvvytdgccssNgRrrpragigvywgpghplnvgirlpgrqtNQraeihaackaieqaktqninklvlytnsmFtingitnWvqgwkkngwktSagkevinkedfvalerltqgmdiqwmhvpghsgfigneeadrlaregakqs/shmgdfvvvytdgccssNrrrpragigvywgpghplnvgirlpgrqtNQraeihaackaieqaktqninklvlytnsmFtingitnWvqgwkkngwkTSagkevinkedfvalerltqgmdiqwmhvpghsgfigneeadrlaregakqs >2qkk_M:Ribonuclease_H-like; title=HUMAN RNASE H CATALYTIC DOMAIN MUTANT D210N IN COMPLEX WITH 14-MER RNA/DNA HYBRID organism=Homo sapiens DNA sequence DG(P15) DG(P16) DA(P17) DA(P18) DT(P19) DC(P20) DA(P21) DG(P22) DG(P23) DT(P24) DG(P25) DT(P26) DC(P27) DG(P28) chainM ( 14) ASN151 0 0 0 0 0 0 0 0 2 3 0 0 0 0 ( 45) ASN182 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 46) GLN183 0 0 0 0 0 0 0 0 0 0 14 4 0 0 ( 76) PHE213 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 84) TRP221 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 96) SER233 0 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence dfvvvytdgccssNgrrrpragigvywgpghplnvgirlpgrqtNQraeihaackaieqaktqninklvlytnsmFtingitnWvqgwkkngwktSagkevinkedfvalerltqgmdiqwmhvpghsgfigneeadrlaregak >2ql2_A:HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE BASIC-HELIX-LOOP-HELIX DOMAINS OF THE HETERODIMER E47/NEUROD1 BOUND TO DNA organism=MUS MUSCULUS DNA sequence DT(E1):DA(F35) DA(E2):DT(F34) DG(E3):DC(F33) DG(E4):DC(F32) DC(E5):DG(F31) DC(E6):DG(F30) DA(E7):DT(F29) DT(E8):DA(F28) DC(E9):DG(F27) DT(E10):DA(F26) DG(E11):DC(F25) DG(E12):DC(F24) DT(E13):DA(F23) DC(E14):DG(F22) DC(E15):DG(F21) DT(E16):DA(F20) chainA ( 6) ASN548 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 8) ARG550 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) GLU551 0 0 0 0 1 8 10 1 0 0 0 0 0 0 0 0 ( 12) ARG554 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 prot.sequence rrmanNaRErvRvrdineafrelgrmcqlhlkaqtkllilqqavqvilgleqqvre >2ql2_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE BASIC-HELIX-LOOP-HELIX DOMAINS OF THE HETERODIMER E47/NEUROD1 BOUND TO DNA organism=MUS MUSCULUS DNA sequence DT(E1):DA(F35) DA(E2):DT(F34) DG(E3):DC(F33) DG(E4):DC(F32) DC(E5):DG(F31) DC(E6):DG(F30) DA(E7):DT(F29) DT(E8):DA(F28) DC(E9):DG(F27) DT(E10):DA(F26) DG(E11):DC(F25) DG(E12):DC(F24) DT(E13):DA(F23) DC(E14):DG(F22) DC(E15):DG(F21) DT(E16):DA(F20) chainA ( 6) ASN548 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 8) ARG550 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) GLU551 0 0 0 0 1 8 10 1 0 0 0 0 0 0 0 0 ( 12) ARG554 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 chainB ( 7) ASN107 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 10) GLU110 0 0 0 0 0 0 0 0 0 9 8 1 0 0 0 0 ( 13) ARG113 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 prot.sequence rrmanNaRErvRvrdineafrelgrmcqlhlkaqtkllilqqavqvilgleqqvre/srrmkaNarErnRmhglnaaldnlrkvvpcysktqklskietlrlaknyiwalseilrs >2ql2_CD:HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE BASIC-HELIX-LOOP-HELIX DOMAINS OF THE HETERODIMER E47/NEUROD1 BOUND TO DNA organism=MUS MUSCULUS DNA sequence DA(H20):DT(G16) DG(H21):DC(G15) DG(H22):DC(G14) DA(H23):DT(G13) DC(H24):DG(G12) DC(H25):DG(G11) DA(H26):DT(G10) DG(H27):DC(G9) DA(H28):DT(G8) DT(H29):DA(G7) DG(H30):DC(G6) DG(H31):DC(G5) DC(H32):DG(G4) DC(H33):DG(G3) DT(H34):DA(G2) DA(H35):DT(G1) chainC ( 6) ASN548 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 9) GLU551 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 12) ARG554 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 chainD ( 6) ASN107 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 9) GLU110 0 0 0 0 1 8 10 2 0 0 0 0 0 0 0 0 ( 12) ARG113 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 ( 13) MET114 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence rrmanNarErvRvrdineafrelgrmcqlhlksdqtkllilqqavqvilgleqqvrer/rrmkaNarErnRMhglnaaldnlrkvvpcysktqklskietlrlaknyiwalseilr >2ql2_D:HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE BASIC-HELIX-LOOP-HELIX DOMAINS OF THE HETERODIMER E47/NEUROD1 BOUND TO DNA organism=MUS MUSCULUS DNA sequence DA(H20):DT(G16) DG(H21):DC(G15) DG(H22):DC(G14) DA(H23):DT(G13) DC(H24):DG(G12) DC(H25):DG(G11) DA(H26):DT(G10) DG(H27):DC(G9) DA(H28):DT(G8) DT(H29):DA(G7) DG(H30):DC(G6) DG(H31):DC(G5) DC(H32):DG(G4) DC(H33):DG(G3) DT(H34):DA(G2) DA(H35):DT(G1) chainD ( 6) ASN107 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 9) GLU110 0 0 0 0 1 8 10 2 0 0 0 0 0 0 0 0 ( 12) ARG113 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 ( 13) MET114 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence rrmkaNarErnRMhglnaaldnlrkvvpcysktqklskietlrlaknyiwalseilr >2qnc_A:His-Me_finger_endonucleases;Recombination_endonuclease_VII,_C-terminal_and_dimerization_domains; title=CRYSTAL STRUCTURE OF T4 ENDONUCLEASE VII N62D MUTANT IN COMPLEX WITH A DNA HOLLIDAY JUNCTION organism=Enterobacteria phage T4 DNA sequence DC(E1):DG(D24) DA(E2):DT(D23) DC(E3):DG(D22) DA(E4):DT(D21) DT(E5):DA(D20) DC(E6):DG(D19) DG(E7):DC(D18) DA(E8):DT(D17) DT(E9):DA(D16) DG(E10):DC(D15) DG(E11):DC(D14) DA(E12):DT(D13) DG(E13):DC(D12) DC(E14):DG(D11) chainA ( 38) HIS38 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 62) ASP62 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 63) ALA63 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence mlltgklykeekqkfydaqngkclicqrelnpdvqanHldhdhelngpkagkvrgllcnlcDAaegqmkhkfnrsglkgqgvdylewlenlltylksdytqnnihpnfvgdkskefsrlgkeemmaemlqrgfeynesdtktqliasfkkqlrkslk >2qnf_A:His-Me_finger_endonucleases;Recombination_endonuclease_VII,_C-terminal_and_dimerization_domains; title=CRYSTAL STRUCTURE OF T4 ENDONUCLEASE VII H43N MUTANT IN COMPLEX WITH HETERODUPLEX DNA CONTAINING BASE MISMATCHES organism=Enterobacteria phage T4 DNA sequence DC(C1):DG(D16) DA(C2):DT(D15) DC(C3):DG(D14) DA(C4):DT(D13) DT(C5):DA(D12) DC(C6):DG(D11) DG(C7):DC(D10) DA(C8):DT(D9) DT(C9):DA(D8) DG(C10):DC(D7) DG(C11):DC(D6) DA(C12):DT(D5) DG(C13):DC(D4) DC(C14):DG(D3) DC(C15):DC(D2) DG(C16):DG(D1) chainA ( 38) HIS38 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mlltgklykeekqkfydaqngkclicqrelnpdvqanHldhdnelngpkagkvrgllcnlcnaaegqmkhkfnrsglkgqgvdylewlenlltylksdytqnnihpnfvgdkskefsrlgkeemmaemlqrgfeynesdtktqliasfkkqlrkslk >2qoj_Z:Homing_endonucleases; title=COEVOLUTION OF A HOMING ENDONUCLEASE AND ITS HOST TARGET SEQUENCE organism=EMERICELLA NIDULANS DNA sequence DG(Y501):DC(X428) DC(Y502):DG(X427) DG(Y503):DC(X426) DC(Y504):DG(X425) DT(Y505):DA(X424) DT(Y506):DA(X423) DT(Y507):DA(X422) DA(Y508):DT(X421) DC(Y509):DG(X420) DA(Y510):DT(X419) DG(Y511):DC(X418) DA(Y512):DT(X417) DG(Y513):DC(X416) DA(Y514):DT(X415) DA(Y515):DT(X414) DA(Y516):DT(X413) DC(Y517):DG(X412) DC(Y518):DG(X411) DT(Y519):DA(X410) DC(Y520):DG(X409) DC(Y521):DG(X408) DT(Y522):DA(X407) DC(Y523):DG(X406) DA(Y524):DT(X405) DG(Y525):DC(X404) DC(Y526):DG(X403) DG(Y527):DC(X402) DC(Y528):DG(X401) chainZ ( 18) TYR18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 ( 20) SER20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 22) THR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 ( 24) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 16 4 0 0 0 0 ( 27) TYR27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 ( 29) THR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 35) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 24 0 0 0 0 0 0 0 0 0 ( 61) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 8 0 0 0 0 0 0 0 0 0 0 ( 64) ILE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) MET66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 3 0 0 0 0 0 0 0 ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 7 0 0 0 0 0 0 (150) CYS150 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) SER152 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) TYR154 0 0 0 0 0 0 0 2 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LEU156 0 0 0 0 0 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) TYR162 0 0 0 0 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ILE164 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) SER166 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ASP168 0 0 0 0 0 0 0 0 0 2 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ALA170 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) TYR192 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) CYS198 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) LYS200 0 0 0 0 0 0 0 0 0 0 4 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) LYS202 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) THR204 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gsdltyaylvglfegdgYfSiTkKgkYlTyelgiElsikdvqliykikkilgigivsfRkRneIeMvalRiRdknhlksfilpifekypmfsnkqydylrfrnallsgiisledlpdytrsdeplnsiesiintsyfsawlvgfieaegCfSvYkLnkdddYlIaSfDiAqrdgdilisairkylsfttkvYldktnCsKlKvTsvrsveniikflqnapvkllgnkklqyllwlkqlrkisrysekikipsny >2qsg_A:Cysteine_proteinases; title=CRYSTAL STRUCTURE OF RAD4-RAD23 BOUND TO A UV-DAMAGED DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(W2):DA(Y24) DG(W3):DC(Y23) DA(W4):DT(Y22) DC(W5):DG(Y21) DT(W6):DA(Y20) DC(W7):DG(Y19) DA(W8):DT(Y18) DA(W9):DT(Y17) DC(W10):DG(Y16) DA(W11):DT(Y15) DT(W12):DA(Y14) DC(W13):DG(Y13) DC(W14):DG(Y12) DT(W15):DT(Y11) DT(W16):DC(Y8) DT(W17):DG(Y7) DG(W18):DA(Y6) DC(W19):DT(Y5) DT(W20):DG(Y4) DA(W21):DT(Y3) chainA ( 7) ARG129 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (350) HIS472 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) ARG494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (373) GLN495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (376) MET498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 (424) ASN554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (426) PHE556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 (428) ASN558 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (430) GLU560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (464) VAL594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (467) PHE597 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 (469) PHE599 0 0 0 0 0 0 0 0 0 0 0 0 0 94 5 0 0 0 0 0 (470) GLU600 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (471) ARG601 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 (474) THR604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 (476) LYS606 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 (477) PRO607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 prot.sequence darrtsRnvcsneerkrrkyfhmlylvclmvhgfirnewinskrlsrklsnlvpekvfellhpqkdeelplrstrklldglkkcmelwqkhwkitkkydneglymrtwkeiemsannkrkfktlkrsdflravskghgdpdisvqgfvamlracnvnarlimscqppdftnmkidtslngnnaykdmvkypifwcevwdkfskkwitvdpvnlktieqvrlhsklapkgvaccernmlryviaydrkygcrdvtrryaqwmnskvrkrritkddfgekwfrkvitalhhrkrtkiddyedqyffqrdesegipdsvqdlknhpyyvleqdikqtqivkpgckecgylkvHgkvgkvlkvyakrdiadlksaRQwyMngrilktgsrckkvikrtveederlysfedtelyipplasasgeitkNtFgNiEvfaptmipgncclvenpvaikaarflgvefapaVtsFkFERgsTvKPvlsgivvakwlreaietaidgiefi >2qsh_A:Cysteine_proteinases; title=CRYSTAL STRUCTURE OF RAD4-RAD23 BOUND TO A MISMATCH DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(Y3):DA(W23) DG(Y4):DC(W22) DT(Y5):DA(W21) DA(Y6):DT(W20) DG(Y7):DC(W19) DC(Y8):DG(W18) DT(Y9):DT(W17) DT(Y11):DT(W16) DG(Y12):DC(W14) DG(Y13):DC(W13) DA(Y14):DT(W12) DT(Y15):DA(W11) DG(Y16):DC(W10) DT(Y17):DA(W9) DT(Y18):DA(W8) DG(Y19):DC(W7) DA(Y20):DT(W6) DG(Y21):DC(W5) DT(Y22):DA(W4) DC(Y23):DG(W3) DA(Y24):DT(W2) chainA ( 7) ARG129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 (350) HIS472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 (372) ARG494 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLN495 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (376) MET498 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) ASN554 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) PHE556 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (428) ASN558 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (430) GLU560 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (464) VAL594 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) PHE597 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) PHE599 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG601 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 (474) THR604 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) LYS606 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) PRO607 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence darrtsRnvcsneerkrrkyfhmlylvclmvhgfirnewinskrlsrklsnlvpekvfellhpqkdeelplrstrklldglkkcmelwqkhwkitkkydneglymrtwkeiemsannkrkfktlkrsdflravskghgdpdisvqgfvamlracnvnarlimscqppdftnmkidtslngnnaykdmvkypifwcevwdkfskkwitvdpvnlktieqvrlhsklapkgvaccernmlryviaydrkygcrdvtrryaqwmnskvrkrritkddfgekwfrkvitalhhrkrtkiddyedqyffqrdesegipdsvqdlknhpyyvleqdikqtqivkpgckecgylkvHgkvgkvlkvyakrdiadlksaRQwyMngrilktgsrckkvikrtveederlysfedtelyipplasasgeitkNtFgNiEvfaptmipgncclvenpvaikaarflgvefapaVtsFkFeRgsTvKPvlsgivvakwlreaietaidgiefi >2r0q_CD:Resolvase-like; title=CRYSTAL STRUCTURE OF A SERINE RECOMBINASE- DNA REGULATORY COMPLEX organism=Staphylococcus aureus DNA sequence DA(A1):DT(B60) DA(A2):DT(B59) DC(A3):DG(B58) DG(A4):DC(B57) DT(A5):DA(B56) DA(A6):DT(B55) DT(A7):DA(B54) DG(A8):DC(B53) DA(A9):DT(B52) DT(A10):DA(B51) DT(A11):DA(B50) DA(A12):DT(B49) DG(A13):DC(B48) DG(A14):DC(B47) DG(A15):DC(B46) DT(A16):DA(B45) DG(A17):DC(B44) DT(A18):DA(B43) DA(A19):DT(B42) DT(A20):DA(B41) DA(A21):DT(B40) DT(A22):DA(B39) DT(A23):DA(B38) DA(A24):DT(B37) DA(A25):DT(B36) DT(A26):DA(B35) DT(A27):DA(B34) DT(A28):DA(B33) DA(A29):DT(B32) chainC (125) GLN132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) TYR145 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) ARG148 0 0 0 0 0 0 0 0 1 13 14 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) PRO149 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS157 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR188 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) ARG189 0 0 6 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) GLN190 0 0 0 0 0 1 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) TYR193 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (139) ARG148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 4 0 0 0 0 (170) SER179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) THR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (180) ARG189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 4 0 0 0 0 0 0 0 0 0 0 0 (181) GLN190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 (184) TYR193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence miigyarvssldqnlerqlenlktfgaekifteknrpilqkalnfvrmgdrfivesidrlgrnynevihtvnylkdkevqlmitslpmmnevignplldkfmkdliiqilamvseqerneskrrQaqgiqvakekgvYkgRPllyspnaKdpqkrviyhrvvemleegqaiskiakevniTRQtvYrikhdng/miigyarvssldqnlerqlenlktfgaekifteknrpilqkalnfvrmgdrfivesidrlgrnynevihtvnylkdkevqlmitslpmmnevignplldkfmkdliiqilamvseqerneskqaqgiqvakekgvykgRpllyspnakdpqkrviyhrvvemleegqaiSkiakevniTRQtvYrikhdng >2r0q_E:Resolvase-like; title=CRYSTAL STRUCTURE OF A SERINE RECOMBINASE- DNA REGULATORY COMPLEX organism=Staphylococcus aureus DNA sequence DA(G1):DT(H60) DA(G2):DT(H59) DC(G3):DG(H58) DG(G4):DC(H57) DT(G5):DA(H56) DA(G6):DT(H55) DT(G7):DA(H54) DG(G8):DC(H53) DA(G9):DT(H52) DT(G10):DA(H51) DT(G11):DA(H50) DA(G12):DT(H49) DG(G13):DC(H48) DG(G14):DC(H47) DG(G15):DC(H46) DT(G16):DA(H45) DG(G17):DC(H44) DT(G18):DA(H43) DA(G19):DT(H42) DT(G20):DA(H41) DA(G21):DT(H40) DT(G22):DA(H39) DT(G23):DA(H38) DA(G24):DT(H37) DA(G25):DT(H36) DT(G26):DA(H35) DT(G27):DA(H34) DT(G28):DA(H33) DA(G29):DT(H32) chainE (125) GLN132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) TYR145 0 0 0 0 0 0 0 0 0 0 0 0 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) ARG148 0 0 0 0 0 0 0 0 2 13 14 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) PRO149 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS157 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR188 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) ARG189 0 0 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) GLN190 0 0 0 0 0 1 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) TYR193 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence miigyarvssldqnlerqlenlktfgaekifteknrpilqkalnfvrmgdrfivesidrlgrnynevihtvnylkdkevqlmitslpmmnevignplldkfmkdliiqilamvseqerneskrrQaqgiqvakekgvYkgRPllyspnaKdpqkrviyhrvvemleegqaiskiakevniTRQtvYrikhdng >2r0q_EF:Resolvase-like; title=CRYSTAL STRUCTURE OF A SERINE RECOMBINASE- DNA REGULATORY COMPLEX organism=Staphylococcus aureus DNA sequence DA(G1):DT(H60) DA(G2):DT(H59) DC(G3):DG(H58) DG(G4):DC(H57) DT(G5):DA(H56) DA(G6):DT(H55) DT(G7):DA(H54) DG(G8):DC(H53) DA(G9):DT(H52) DT(G10):DA(H51) DT(G11):DA(H50) DA(G12):DT(H49) DG(G13):DC(H48) DG(G14):DC(H47) DG(G15):DC(H46) DT(G16):DA(H45) DG(G17):DC(H44) DT(G18):DA(H43) DA(G19):DT(H42) DT(G20):DA(H41) DA(G21):DT(H40) DT(G22):DA(H39) DT(G23):DA(H38) DA(G24):DT(H37) DA(G25):DT(H36) DT(G26):DA(H35) DT(G27):DA(H34) DT(G28):DA(H33) DA(G29):DT(H32) chainE (125) GLN132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) TYR145 0 0 0 0 0 0 0 0 0 0 0 0 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) ARG148 0 0 0 0 0 0 0 0 2 13 14 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) PRO149 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS157 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR188 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) ARG189 0 0 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) GLN190 0 0 0 0 0 1 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) TYR193 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (139) ARG148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 8 3 0 0 0 0 (170) SER179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) THR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (180) ARG189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 4 0 0 0 0 0 0 0 0 0 0 0 (181) GLN190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 (184) TYR193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence miigyarvssldqnlerqlenlktfgaekifteknrpilqkalnfvrmgdrfivesidrlgrnynevihtvnylkdkevqlmitslpmmnevignplldkfmkdliiqilamvseqerneskrrQaqgiqvakekgvYkgRPllyspnaKdpqkrviyhrvvemleegqaiskiakevniTRQtvYrikhdng/miigyarvssldqnlerqlenlktfgaekifteknrpilqkalnfvrmgdrfivesidrlgrnynevihtvnylkdkevqlmitslpmmnevignplldkfmkdliiqilamvseqerneskqaqgiqvakekgvykgRpllyspnakdpqkrviyhrvvemleegqaiSkiakevniTRQtvYrikhdng >2r1j_L:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH THE SYNTHETIC OPERATOR 9T organism=Enterobacteria phage P22 DNA sequence DT(A21):DA(B20) DA(A22):DT(B19) DT(A23):DA(B18) DT(A24):DA(B17) DT(A25):DA(B16) DA(A26):DT(B15) DA(A27):DT(B14) DG(A28):DC(B13) DA(A29):DT(B12) DT(A30):DA(B11) DA(A31):DT(B10) DT(A32):DA(B9) DC(A33):DG(B8) DT(A34):DA(B7) DT(A35):DA(B6) DA(A36):DT(B5) DA(A37):DT(B4) DA(A38):DT(B3) DT(A39):DA(B2) DG(A40):DC(B1) chainL ( 19) GLN21 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER31 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN32 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) VAL33 0 0 0 2 6 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ALA34 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER36 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN37 0 0 0 0 0 1 8 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG40 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLU42 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR43 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tqlmgerirarrkklkirQaalgkmvgvSNVAiSQweRsETepngenllalskalqcspdyllkgd >2r1j_LR:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH THE SYNTHETIC OPERATOR 9T organism=Enterobacteria phage P22 DNA sequence DT(A21):DA(B20) DA(A22):DT(B19) DT(A23):DA(B18) DT(A24):DA(B17) DT(A25):DA(B16) DA(A26):DT(B15) DA(A27):DT(B14) DG(A28):DC(B13) DA(A29):DT(B12) DT(A30):DA(B11) DA(A31):DT(B10) DT(A32):DA(B9) DC(A33):DG(B8) DT(A34):DA(B7) DT(A35):DA(B6) DA(A36):DT(B5) DA(A37):DT(B4) DA(A38):DT(B3) DT(A39):DA(B2) DG(A40):DC(B1) chainL ( 19) GLN21 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER31 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN32 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) VAL33 0 0 0 2 6 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ALA34 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER36 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN37 0 0 0 0 0 1 8 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG40 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLU42 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR43 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 chainR ( 19) GLN21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 29) SER31 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 30) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 31) VAL33 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 6 2 0 0 0 ( 32) ALA34 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 34) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 ( 35) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 7 7 1 0 0 0 0 0 ( 38) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 41) THR43 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 prot.sequence tqlmgerirarrkklkirQaalgkmvgvSNVAiSQweRsETepngenllalskalqcspdyllkgd/tqlmgerirarrkklkirQaalgkmvgvSNVAiSQweRsETepngenllalskalqcspdyllkgd >2r2r_A:DNA/RNA_polymerases; title=D(ATTAGTTATAACTAAT) COMPLEXED WITH MMLV RT CATALYTIC FRAGMENT organism=Moloney murine leukemia virus DNA sequence DA(B1):DT(G16) DT(B2):DA(G15) DT(B3):DA(G14) DA(B4):DT(G13) DG(B5):DC(G12) DT(B6):DA(G11) DT(B7):DA(G10) DA(B8):DT(G9) chainA ( 41) TYR64 1 0 0 0 0 0 0 0 ( 76) LEU99 19 0 0 0 0 0 0 0 ( 89) VAL112 1 0 0 0 0 0 0 0 ( 91) ASP114 7 0 0 0 0 0 0 0 ( 93) ARG116 8 11 3 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >2r2s_A:DNA/RNA_polymerases; title=CO(III)BLEOMYCINB2 BOUND TO D(ATTAGTTATAACTAAT) COMPLEXED WITH MMLV RT CATALYTIC FRAGMENT organism=Moloney murine leukemia virus DNA sequence DA(G10):DT(B7) DA(G11):DT(B6) DC(G12):DG(B5) DT(G13):DA(B4) DA(G14):DT(B3) DA(G15):DT(B2) DT(G16):DA(B1) chainA ( 41) TYR64 0 0 0 0 0 0 2 ( 76) LEU99 0 0 0 0 0 0 15 ( 91) ASP114 0 0 0 0 0 0 5 ( 93) ARG116 0 0 0 0 3 10 6 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >2r2t_A:DNA/RNA_polymerases; title=D(ATTTAGTTAACTAAAT) COMPLEXED WITH MMLV RT CATALYTIC FRAGMENT organism=Moloney murine leukemia virus DNA sequence DA(B1):DT(G16) DT(B2):DA(G15) DT(B3):DA(G14) DT(B4):DA(G13) DA(B5):DT(G12) DG(B6):DC(G11) DT(B7):DA(G10) DT(B8):DA(G9) chainA ( 41) TYR64 1 0 0 0 0 0 0 0 ( 76) LEU99 21 0 0 0 0 0 0 0 ( 89) VAL112 1 0 0 0 0 0 0 0 ( 91) ASP114 7 0 0 0 0 0 0 0 ( 93) ARG116 8 13 3 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >2r2u_A:DNA/RNA_polymerases; title=CO(III)BLEOMYCINB2 BITHIAZOLE/C-TERMINAL TAIL DOMAIN BOUND TO D(ATTTAGTTAACTAAAT) COMPLEXED WITH MMLV RT CATALYTIC FRAGMENT organism=Moloney murine leukemia virus DNA sequence DA(G10):DT(B7) DC(G11):DG(B6) DT(G12):DA(B5) DA(G13):DT(B4) DA(G14):DT(B3) DA(G15):DT(B2) DT(G16):DA(B1) chainA ( 41) TYR64 0 0 0 0 0 0 2 ( 76) LEU99 0 0 0 0 0 0 21 ( 89) VAL112 0 0 0 0 0 0 2 ( 91) ASP114 0 0 0 0 0 0 8 ( 93) ARG116 0 0 0 0 3 12 10 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvkkpgtndyrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >2r5y_A:Homeodomain-like; title=STRUCTURE OF SCR/EXD COMPLEX BOUND TO A CONSENSUS HOX-EXD SITE organism=DROSOPHILA MELANOGASTER DNA sequence DC(C2):DG(D40) DT(C3):DA(D39) DC(C4):DG(D38) DT(C5):DA(D37) DA(C6):DT(D36) DT(C7):DA(D35) DG(C8):DC(D34) DA(C9):DT(D33) DT(C10):DA(D32) DT(C11):DA(D31) DT(C12):DA(D30) DA(C13):DT(D29) DT(C14):DA(D28) DG(C15):DC(D27) DG(C16):DC(D26) DG(C17):DC(D25) DC(C18):DG(D24) DT(C19):DA(D23) DG(C20):DC(D22) chainA ( 17) ARG105 0 0 0 0 0 0 0 0 7 13 7 0 0 0 0 0 0 0 0 ( 59) ILE147 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 62) GLN150 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 ( 63) ASN151 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 ( 66) MET154 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 prot.sequence gkknppqiypwmkrvqRtsytryqtlelekefhfnryltrrrrieiahalslterqikIwfQNrrMkwkkehk >2r5y_AB:Homeodomain-like; title=STRUCTURE OF SCR/EXD COMPLEX BOUND TO A CONSENSUS HOX-EXD SITE organism=DROSOPHILA MELANOGASTER DNA sequence DC(D22):DG(C20) DA(D23):DT(C19) DG(D24):DC(C18) DC(D25):DG(C17) DC(D26):DG(C16) DC(D27):DG(C15) DA(D28):DT(C14) DT(D29):DA(C13) DA(D30):DT(C12) DA(D31):DT(C11) DA(D32):DT(C10) DT(D33):DA(C9) DC(D34):DG(C8) DA(D35):DT(C7) DT(D36):DA(C6) DA(D37):DT(C5) DG(D38):DC(C4) DA(D39):DT(C3) DG(D40):DC(C2) chainA ( 17) ARG105 0 0 0 0 0 0 0 0 7 13 7 0 0 0 0 0 0 0 0 ( 59) ILE147 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN150 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN151 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 ( 66) MET154 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 1) ARG205 0 0 0 0 0 0 0 0 0 0 0 0 17 5 0 0 0 0 0 ( 46) ASN247 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 50) ASN251 0 0 0 0 0 0 0 0 0 0 2 11 5 0 0 0 0 0 0 ( 53) ILE254 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 54) ARG255 0 0 0 0 0 0 0 0 0 0 0 7 16 16 0 0 0 0 0 prot.sequence gkknppqiypwmkrvqRtsytryqtlelekefhfnryltrrrrieiahalslterqikIwfQNrrMkwkkehk/RrnfskqaseilneyfyshlsnpypseeakeelarkcgitvsqvsNwfgNkrIRykkni >2r5z_A:Homeodomain-like; title=STRUCTURE OF SCR/EXD COMPLEX BOUND TO A DNA SEQUENCE DERIVED FROM THE FKH GENE organism=DROSOPHILA MELANOGASTER DNA sequence DC(D22):DG(C20) DA(D23):DT(C19) DG(D24):DC(C18) DC(D25):DG(C17) DC(D26):DG(C16) DG(D27):DC(C15) DA(D28):DT(C14) DT(D29):DA(C13) DT(D30):DA(C12) DA(D31):DT(C11) DA(D32):DT(C10) DT(D33):DA(C9) DC(D34):DG(C8) DT(D35):DA(C7) DT(D36):DA(C6) DA(D37):DT(C5) DG(D38):DC(C4) DA(D39):DT(C3) DG(D40):DC(C2) chainA ( 15) HIS89 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 ( 17) ARG103 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 ( 19) ARG105 0 0 0 0 0 0 0 0 4 7 13 0 0 0 0 0 0 0 0 ( 61) ILE147 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 64) GLN150 0 0 0 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ASN151 0 0 0 0 0 0 0 13 4 0 0 0 0 0 0 0 0 0 0 ( 68) MET154 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kknppqiypwmkrvHlRqRtsytryqtlelekefhfnryltrrrrieiahalslterqikIwfQNrrMkwkKehk >2r5z_AB:Homeodomain-like; title=STRUCTURE OF SCR/EXD COMPLEX BOUND TO A DNA SEQUENCE DERIVED FROM THE FKH GENE organism=DROSOPHILA MELANOGASTER DNA sequence DC(D22):DG(C20) DA(D23):DT(C19) DG(D24):DC(C18) DC(D25):DG(C17) DC(D26):DG(C16) DG(D27):DC(C15) DA(D28):DT(C14) DT(D29):DA(C13) DT(D30):DA(C12) DA(D31):DT(C11) DA(D32):DT(C10) DT(D33):DA(C9) DC(D34):DG(C8) DT(D35):DA(C7) DT(D36):DA(C6) DA(D37):DT(C5) DG(D38):DC(C4) DA(D39):DT(C3) DG(D40):DC(C2) chainA ( 15) HIS89 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 ( 17) ARG103 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 ( 19) ARG105 0 0 0 0 0 0 0 0 4 7 13 0 0 0 0 0 0 0 0 ( 61) ILE147 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 64) GLN150 0 0 0 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ASN151 0 0 0 0 0 0 0 13 4 0 0 0 0 0 0 0 0 0 0 ( 68) MET154 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 46) ASN247 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 ( 50) ASN251 0 0 0 0 0 0 0 0 0 0 2 10 6 0 0 0 0 0 0 ( 53) ILE254 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 54) ARG255 0 0 0 0 0 0 0 0 0 0 0 7 11 4 0 0 0 0 0 prot.sequence kknppqiypwmkrvHlRqRtsytryqtlelekefhfnryltrrrrieiahalslterqikIwfQNrrMkwkKehk/rrnfskqaseilneyfyshlsnpypseeakeelarkcgitvsqvsNwfgNkrIRykkni >2r7z_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CISPLATIN LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(N1):DG(T16) DA(N2):DT(T15) DA(N3):DT(T14) DG(N4):DC(T13) DT(N5):DA(T12) DA(N6):DT(T11) chainA (1347) ARG1386 0 4 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >2r7z_AB: title=CISPLATIN LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(T11):DA(N6) DA(T12):DT(N5) DC(T13):DG(N4) DT(T14):DA(N3) DT(T15):DA(N2) DG(T16):DC(N1) chainA (1347) ARG1386 0 0 0 0 4 0 chainB prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >2r8j_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF THE EUKARYOTIC DNA POLYMERASE ETA IN COMPLEX WITH 1,2- D(GPG)-CISPLATIN CONTAINING DNA organism=Saccharomyces cerevisiae DNA sequence DC(T6):DG(P13) DT(T7):DA(P12) DC(T8):DG(P11) DA(T9):DT(P10) DT(T10):DA(P9) DC(T11):DG(P8) DC(T12):DG(P7) DA(T13):DT(P6) DC(T14):DG(P5) chainB (396) MET396 0 0 0 0 1 0 0 0 0 prot.sequence mskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvqwnsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpakqisvedhkvslepyrresrkalkifksacdlverasidevfldlgricfnmlmfdneyeltgdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvilalgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdydrstsnidplktadlaeklfklsrgryglplssrpvvksmMsnknlrgkscnsivdciswlevfcaeltsriqdleqeynkiviprtvsislktksyevyrksgpvaykginfqshellkvgikfvtdldikgknksyypltklsmtitnfdii >2r9l_A:PLP-dependent_transferases; title=POLYMERASE DOMAIN FROM MYCOBACTERIUM TUBERCULOSIS LIGASE D IN COMPLEX WITH DNA organism=Mycobacterium tuberculosis H37Rv DNA sequence DG(D1):DC(C5) DC(D2):DG(C4) DC(D3):DG(C3) DG(D4):DC(C2) DC(D5):DG(C1) chainA ( 48) ARG53 0 0 0 0 10 ( 50) PRO55 0 0 0 0 12 ( 58) PHE63 0 0 0 0 48 prot.sequence eqrvtltnadkvlypatgttksdifdyyagvaevmlghiagrpatrkRwPngvdqpaFfekqlalsappwlsratvahrsgtttypiidsatglawiaqqaalevhvpqwrfvaepgsgelnpgpatrlvfdldpgegvmmaqlaevaravrdlladiglvtfpvtsgskglhlytpldepvssrgatvlakrvaqrleqampalvtstmtkslragkvfvdwsqnsgskttiapyslrgrthptvaaprtwaelddpalrqlsydevltriardgdllerldadap >2ram_A:p53-like_transcription_factors;E_set_domains; title=A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER organism=Mus musculus DNA sequence DC(C1):DG(D20) DG(C2):DC(D19) DG(C3):DC(D18) DC(C4):DG(D17) DT(C5):DA(D16) DG(C6):DC(D15) DG(C7):DC(D14) DA(C8):5IU(D13) DA(C9):5IU(D12) DA(C10):DT(D11) DT(C11):DA(D10) 5IU(C12):DA(D9) 5IU(C13):DA(D8) DC(C14):DG(D7) DC(C15):DG(D6) DA(C16):DT(D5) DG(C17):DC(D4) DC(C18):DG(D3) DC(C19):DG(D2) DG(C20):DC(D1) chainA ( 15) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 1 8 14 0 0 0 0 0 ( 17) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 2 0 0 0 0 ( 18) TYR36 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 0 0 0 0 4 9 1 0 0 0 0 0 (169) ARG187 0 0 0 0 0 0 0 0 0 0 0 3 9 2 0 0 0 0 0 0 (171) PRO189 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (200) LYS218 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence pyveiieqpkqrgmRfRykcEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRaPntaelkicrvnrnsgsclggdeifllcdKvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd >2ram_AB:p53-like_transcription_factors;E_set_domains; title=A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER organism=Mus musculus DNA sequence DC(C1):DG(D20) DG(C2):DC(D19) DG(C3):DC(D18) DC(C4):DG(D17) DT(C5):DA(D16) DG(C6):DC(D15) DG(C7):DC(D14) DA(C8):5IU(D13) DA(C9):5IU(D12) DA(C10):DT(D11) DT(C11):DA(D10) 5IU(C12):DA(D9) 5IU(C13):DA(D8) DC(C14):DG(D7) DC(C15):DG(D6) DA(C16):DT(D5) DG(C17):DC(D4) DC(C18):DG(D3) DC(C19):DG(D2) DG(C20):DC(D1) chainA ( 15) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 1 8 14 0 0 0 0 0 ( 17) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 2 0 0 0 0 ( 18) TYR36 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 0 0 0 0 4 9 1 0 0 0 0 0 (169) ARG187 0 0 0 0 0 0 0 0 0 0 0 3 9 2 0 0 0 0 0 0 (171) PRO189 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (200) LYS218 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB ( 18) TYR36 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 (169) ARG187 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 prot.sequence pyveiieqpkqrgmRfRykcEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRaPntaelkicrvnrnsgsclggdeifllcdKvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/pyveiieqpkqrgmrfrYkcEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd >2rba_AB:Uracil-DNA_glycosylase-like; title=STRUCTURE OF HUMAN THYMINE DNA GLYCOSYLASE BOUND TO ABASIC AND UNDAMAGED DNA organism=Homo sapiens DNA sequence DC(D2):DG(C21) DA(D3):DT(C20) DC(D4):DG(C19) DT(D5):DA(C18) DG(D6):DC(C17) DC(D7):DG(C16) DT(D8):DA(C15) DC(D9):DG(C14) DA(D10):DT(C13) 3DR(D11):DG(C12) DG(D12):DC(C11) DT(D13):DA(C10) DA(D14):DT(C9) DC(D15):DG(C8) DA(D16):DT(C7) DG(D17):DC(C6) DA(D18):DT(C5) DG(D19):DC(C4) DC(D20):DG(C3) DT(D21):DA(C2) DG(D22):DC(C1) chainA ( 79) LYS201 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 (152) ALA274 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG275 0 0 0 0 0 0 0 0 24 0 10 0 0 0 0 0 0 0 0 0 0 (154) CYS276 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (155) ALA277 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 (156) GLN278 0 0 0 0 0 0 0 0 0 0 5 7 1 0 0 0 0 0 0 0 0 (158) PRO280 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainB (153) ARG275 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) CYS276 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ALA277 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgsKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARCAQfPraqdkvhyyiklkdlrdqlkgier/tlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgskdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssaRCAqfpraqdkvhyyiklkdlrdqlkgier >2rba_B:Uracil-DNA_glycosylase-like; title=STRUCTURE OF HUMAN THYMINE DNA GLYCOSYLASE BOUND TO ABASIC AND UNDAMAGED DNA organism=Homo sapiens DNA sequence DC(C1):DG(D22) DA(C2):DT(D21) DG(C3):DC(D20) DC(C4):DG(D19) DT(C5):DA(D18) DC(C6):DG(D17) DT(C7):DA(D16) DG(C8):DC(D15) DT(C9):DA(D14) DA(C10):DT(D13) DC(C11):DG(D12) DG(C12):3DR(D11) DT(C13):DA(D10) DG(C14):DC(D9) DA(C15):DT(D8) DG(C16):DC(D7) DC(C17):DG(D6) DA(C18):DT(D5) DG(C19):DC(D4) DT(C20):DA(D3) DG(C21):DC(D2) chainB (153) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 0 (154) CYS276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (155) ALA277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 prot.sequence tlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgskdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssaRCAqfpraqdkvhyyiklkdlrdqlkgier >2rbf_A:Ribbon-helix-helix; title=STRUCTURE OF THE RIBBON-HELIX-HELIX DOMAIN OF ESCHERICHIA COLI PUTA (PUTA52) COMPLEXED WITH OPERATOR DNA (O2) organism=Escherichia coli DNA sequence DG(C4):DC(D18) DC(C5):DG(D17) DG(C6):DC(D16) DG(C7):DC(D15) DT(C8):DA(D14) DT(C9):DA(D13) DG(C10):DC(D12) DC(C11):DG(D11) DA(C12):DT(D10) DC(C13):DG(D9) DC(C14):DG(D8) DT(C15):DA(D7) DT(C16):DA(D6) DT(C17):DA(D5) DC(C18):DG(D4) DA(C19):DT(D3) DA(C20):DT(D2) DA(C21):DT(D1) chainA ( 2) THR4 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 3) THR5 0 0 0 0 10 8 4 0 0 0 0 0 0 0 0 0 0 0 ( 4) MET6 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 7) LYS9 0 0 0 0 0 0 0 0 1 12 5 0 0 0 0 0 0 0 ( 28) HIS30 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tTTMgvKlddatreriksaatridrtpHwlikqaifsyleqlen >2rbf_AB:Ribbon-helix-helix; title=STRUCTURE OF THE RIBBON-HELIX-HELIX DOMAIN OF ESCHERICHIA COLI PUTA (PUTA52) COMPLEXED WITH OPERATOR DNA (O2) organism=Escherichia coli DNA sequence DG(C4):DC(D18) DC(C5):DG(D17) DG(C6):DC(D16) DG(C7):DC(D15) DT(C8):DA(D14) DT(C9):DA(D13) DG(C10):DC(D12) DC(C11):DG(D11) DA(C12):DT(D10) DC(C13):DG(D9) DC(C14):DG(D8) DT(C15):DA(D7) DT(C16):DA(D6) DT(C17):DA(D5) DC(C18):DG(D4) DA(C19):DT(D3) DA(C20):DT(D2) DA(C21):DT(D1) chainA ( 2) THR4 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 3) THR5 0 0 0 0 10 8 4 0 0 0 0 0 0 0 0 0 0 0 ( 4) MET6 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 7) LYS9 0 0 0 0 0 0 0 0 1 12 5 0 0 0 0 0 0 0 ( 28) HIS30 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) THR5 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 ( 6) LYS9 0 0 8 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) HIS30 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence tTTMgvKlddatreriksaatridrtpHwlikqaifsyleqlen/tTmgvKlddatreriksaatridrtpHwlikqaifsyleqlensd >2rdj_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=SNAPSHOTS OF A Y-FAMILY DNA POLYMERASE IN REPLICATION: DPO4 IN APO AND BINARY/TERNARY COMPLEX FORMS organism=Sulfolobus solfataricus DNA sequence DA(F5):DT(E14) DT(F6):DA(E13) DT(F7):DA(E12) DC(F8):DG(E11) DG(F9):DC(E10) DA(F10):DT(E9) DA(F11):DT(E8) DG(F12):DC(E7) DG(F13):DC(E6) DG(F14):DC(E5) DT(F15):DA(E4) DC(F16):DG(E3) DC(F17):DG(E2) DC(F18):DG(E1) chainB ( 12) TYR12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL32 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA44 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) MET76 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) SER297 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (332) ARG332 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfYaqveevlnpslkgkpvvvcVfsgrfedsgAvAtanyearkfgvkAgipiveakkilpnavylpMrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeaKakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivSrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >2rgr_A:Type_II_DNA_topoisomerase; title=TOPOISOMERASE IIA BOUND TO G-SEGMENT DNA organism=Saccharomyces cerevisiae DNA sequence DC(C1):DG(D19) DC(C2):DG(D18) DA(C4):DT(D16) DG(C5):DC(D15) DG(C6):DC(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DA(C10):DT(D10) DC(C11):DG(D9) DG(C12):DC(D8) DA(C13):DT(D7) DT(C14):DA(D6) DG(C15):DC(D5) chainA ( 57) ARG475 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 59) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 5 6 (273) SER691 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (415) ILE833 0 0 0 0 0 0 0 0 0 24 22 0 0 0 (420) SER838 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence rksritnypkledankagtkegykctlvltegdsalslavaglavvgrdyygcyplRgKmlnvreasadqilknaeiqaikkimglqhrkkyedtkslryghlmimtdqdhdgshikgliinflessflglldiqgfllefitpiikvsitkptkntiafynmpdyekwreeeshkftwkqkyykglgtslaqevreyfsnldrhlkifhslqgndkdyidlafskkkaddrkewlrqyepgtvldptlkeipisdfinkelilfslaDnirSipnvldgfkpgqrkvlygcfkknlkselkvaqlapyvsectayhhgeqslaqtiiglaqnfvgsnniylllpngafgtratggkdaaaaryiytelnkltrkifhpaddplykyiqedektvepewylpilpmilvngaegIgtgwStyippfnpleiiknirhlmndeeleqmhpwfrgwtgtieeieplryrmygrieqigdnvleitelpartwtstikeylllglsgndkikpwikdmeeqhddnikfiitlspeemaktrkigfyerfklispislmnmvafdphgkikkynsvneilsefyyvrleyyqkrkdhmserlqwevekysfqvkfikmiiekeltvtnkprnaiiqelenlgfprfnkegkpyygslygtyeyllgmriwsltkeryqkllkqkqeketelenllklsakdiwntdlkafevgyqeflqrdaear >2rve_AB: title=THE CRYSTAL STRUCTURE OF ECORV ENDONUCLEASE AND OF ITS COMPLEXES WITH COGNATE AND NON-COGNATE DNA SEGMENTS organism=ESCHERICHIA COLI DNA sequence DC(D1):DG(C8) DG(D2):DC(C7) DA(D3):DT(C6) DG(D4):DC(C5) DC(D5):DG(C4) DT(D6):DA(C3) DC(D7):DG(C2) DG(D8):DC(C1) DC(E1):DG(F8) DG(E2):DC(F7) DA(E3):DT(F6) DG(E4):DC(F5) DC(E5):DG(F4) DT(E6):DA(F3) DC(E7):DG(F2) DG(E8):DC(F1) chainA ( 32) LYS38 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 64) ASN70 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 chainB ( 62) ASN70 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 (166) SER183 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence slrsdlinalyydvcgiisaegkiyplgsdtKvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikftlggytsfirnntknivypfdqyiahwiigyvytrtyninelneipkpykgvkvflqdkwviagdlagstnigsihahykdfvegkgifdsedefldywrnyeynniseyrnwi/slrsdlinalyvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikftlggytsfirnntKnivypfdqyiahwiigyvytrtyninelneipkpykgvkvflqdkwviagdlagStnigsihahykdfvegkgifdsedefldywrnyeynniseyrnwiy >2rve_B:Restriction_endonuclease-like; title=THE CRYSTAL STRUCTURE OF ECORV ENDONUCLEASE AND OF ITS COMPLEXES WITH COGNATE AND NON-COGNATE DNA SEGMENTS organism=ESCHERICHIA COLI DNA sequence DC(F1):DG(E8) DG(F2):DC(E7) DA(F3):DT(E6) DG(F4):DC(E5) DC(F5):DG(E4) DT(F6):DA(E3) DC(F7):DG(E2) DG(F8):DC(E1) DC(C1):DG(D8) DG(C2):DC(D7) DA(C3):DT(D6) DG(C4):DC(D5) DC(C5):DG(D4) DT(C6):DA(D3) DC(C7):DG(D2) DG(C8):DC(D1) chainB ( 62) ASN70 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 (166) SER183 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence slrsdlinalyvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikftlggytsfirnntKnivypfdqyiahwiigyvytrtyninelneipkpykgvkvflqdkwviagdlagStnigsihahykdfvegkgifdsedefldywrnyeynniseyrnwiy >2ssp_E:Uracil-DNA_glycosylase-like; title=LEUCINE-272-ALANINE URACIL-DNA GLYCOSYLASE BOUND TO ABASIC SITE- CONTAINING DNA organism=Homo sapiens DNA sequence DA(B22):DT(A10) DA(B23):DT(A9) DG(B24):DC(A8) DA(B25):DT(A7) DT(B26):DA(A6) DA(B28):DT(A4) DC(B29):DG(A3) DA(B30):DT(A2) DG(B31):DC(A1) chainE (190) PRO271 0 0 0 0 0 5 0 0 0 (191) ALA272 0 0 0 0 3 3 0 0 0 (195) ARG276 0 0 0 1 2 0 0 0 0 prot.sequence meffgeswkkhlsgefgkpyfiklmgfvaeerkhytvyppphqvftwtqmcdikdvkvvilgqdpyhgpnqahglcfsvqrpvppppsleniykelstdiedfvhpghgdlsgwakqgvlllnavltvrahqanshkergweqftdavvswlnqnsnglvfllwgsyaqkkgsaidrkrhhvlqtahpsPAsvyRgffgcrhfsktnellqksgkkpidwkel >2stt_A:"Winged_helix"_DNA-binding_domain; title=SOLUTION NMR STRUCTURE OF THE HUMAN ETS1/DNA COMPLEX, 25 STRUCTURES organism=? DNA sequence DT(B1):DA(C34) DC(B2):DG(C33) DG(B3):DC(C32) DA(B4):DT(C31) DG(B5):DC(C30) DC(B6):DG(C29) DC(B7):DG(C28) DG(B8):DC(C27) DG(B9):DC(C26) DA(B10):DT(C25) DA(B11):DT(C24) DG(B12):DC(C23) DT(B13):DA(C22) DT(B14):DA(C21) DC(B15):DG(C20) DG(B16):DC(C19) DA(B17):DT(C18) chainA ( 68) GLU77 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 ( 71) SER80 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 72) ARG81 0 0 0 0 0 0 11 7 22 4 0 0 0 0 0 0 0 ( 75) ARG84 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 76) TYR85 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence vipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEklSRglRYyydkniihktagkryvyrfv >2stw_A:"Winged_helix"_DNA-binding_domain; title=SOLUTION NMR STRUCTURE OF THE HUMAN ETS1/DNA COMPLEX, RESTRAINED REGULARIZED MEAN STRUCTURE organism=? DNA sequence DT(C18):DA(B17) DC(C19):DG(B16) DG(C20):DC(B15) DA(C21):DT(B14) DA(C22):DT(B13) DC(C23):DG(B12) DT(C24):DA(B11) DT(C25):DA(B10) DC(C26):DG(B9) DC(C27):DG(B8) DG(C28):DC(B7) DG(C29):DC(B6) DC(C30):DG(B5) DT(C31):DA(B4) DC(C32):DG(B3) DG(C33):DC(B2) DA(C34):DT(B1) chainA ( 68) GLU77 0 0 0 0 0 0 0 0 0 0 3 11 1 0 0 0 0 ( 72) ARG81 0 0 0 0 0 0 0 2 14 19 11 0 0 0 0 0 0 ( 75) ARG84 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 ( 76) TYR85 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 prot.sequence vipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEklsRglRYyydkniihktagkryvyrfv >2up1_A:RNA-binding_domain,_RBD; title=STRUCTURE OF UP1-TELOMERIC DNA COMPLEX organism=HOMO SAPIENS DNA sequence DG(B211) DG(B210) DA(B209) DT(B208) DT(B207) DG(B206) DG(B205) DT(B202) DA(B203) DG(B204):DG(B205) chainA ( 4) GLU11 0 0 0 0 0 0 1 0 0 1 ( 5) GLN12 0 0 0 0 0 0 0 0 0 4 ( 8) LYS15 0 0 0 0 0 0 2 0 0 12 ( 10) PHE17 0 0 0 0 0 0 0 2 45 0 ( 35) ASP42 0 0 0 0 0 0 11 0 0 11 ( 37) VAL44 0 0 0 0 0 0 12 0 0 12 ( 39) MET46 0 0 0 0 0 0 6 0 0 8 ( 52) PHE59 0 0 0 0 0 0 0 0 5 29 ( 75) ARG82 0 0 0 0 0 0 0 4 0 0 ( 78) GLU85 0 0 0 0 0 0 0 16 0 0 ( 80) LYS87 0 0 0 0 0 0 0 4 2 0 ( 82) ALA89 0 0 0 0 0 0 0 0 2 1 ( 83) VAL90 0 0 0 0 0 0 0 0 6 0 ( 85) ARG92 0 0 0 5 25 0 4 0 0 34 ( 88) SER95 0 0 0 0 0 0 0 0 2 4 ( 94) HIS101 0 0 0 0 0 0 0 0 33 0 prot.sequence kepEQlrKlFigglsfettdeslrshfeqwgtltDcVvMrdpntkrsrgfgFvtyatveevdaamnarphkvdgRvvEpKrAVsRedSqrpgaHltvkkifvggikedteehhlrdyfeqygkievieimtdrgsgkkrgfafvtfddhdsvdkiviqkyhtvnghncevrkalskqemasas >2uvr_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURES OF MUTANT DPO4 DNA POLYMERASES WITH 8-OXOG CONTAINING DNA TEMPLATE-PRIMER CONSTRUCTS organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) DC(P14):DC(T4) chainA ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (336) ARG336 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkiraigvRfskfi >2uvu_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURES OF MUTANT DPO4 DNA POLYMERASES WITH 8-OXOG CONTAINING DNA TEMPLATE-PRIMER CONSTRUCTS organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) DA(P14):DC(T4) chainA ( 33) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 43) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (337) ARG336 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkiraigvRfskfie >2uvv_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURES OF MUTANT DPO4 DNA POLYMERASES WITH 8-OXOG CONTAINING DNA TEMPLATE-PRIMER CONSTRUCTS organism=SULFOLOBUS SOLFATARICUS DNA sequence DC(T4):DC(P14) DG(T6):DC(P13) DA(T7):DT(P12) DA(T8):DT(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA ( 32) VAL32 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkireigvRfskfie >2uvw_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURES OF MUTANT DPO4 DNA POLYMERASES WITH 8-OXOG CONTAINING DNA TEMPLATE-PRIMER CONSTRUCTS organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) DA(P14):DC(T4) chainA ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (336) ARG336 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkireigvRfskfi >2uyc_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HHAI DNA METHYLTRANSFERASE R163N MUTANT COMPLEX WITH 13MER GCGC-GMGC OLIGONUCLEOTIDE AND SAH organism=HAEMOPHILUS HAEMOLYTICUS DNA sequence DG(C402):DC(D433) DG(C403):DC(D432) DA(C404):DT(D431) DT(C405):DA(D430) DG(C406):DC(D429) 5CM(C407):DG(D428) DC(C409):DG(D426) DT(C410):DA(D425) DG(C411):DC(D424) DA(C412):DT(D423) DC(C413):DG(D422) chainA ( 86) ILE86 0 0 0 0 0 0 1 3 3 0 0 ( 87) SER87 0 0 0 0 0 8 8 0 0 0 0 (228) ARG228 0 0 0 0 0 0 0 1 0 0 0 (237) GLN237 0 0 0 0 0 23 31 0 0 0 0 (239) GLU239 0 0 0 0 0 4 0 0 0 0 0 (240) ARG240 0 0 0 0 0 0 11 9 0 0 0 (252) SER252 0 0 0 0 0 1 0 0 0 0 0 (254) TYR254 0 0 0 0 1 0 0 0 0 0 0 (260) ALA260 0 0 0 1 0 0 0 0 0 0 0 (261) LYS261 0 0 0 1 0 0 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkneriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgeRiystrgiaitlSaYgggifAKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy >2uyh_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HHAI DNA METHYLTRANSFERASE S87Q-Q237S MUTANT COMPLEX WITH 13MER GCGC- GMGC OLIGONUCLEOTIDE AND SAH organism=HAEMOPHILUS HAEMOLYTICUS DNA sequence DG(D422):DC(C413) DT(D423):DA(C412) DC(D424):DG(C411) DA(D425):DT(C410) DG(D426):DC(C409) DC(D427):DG(C408) DG(D428):5CM(C407) DC(D429):DG(C406) DA(D430):DT(C405) DT(D431):DA(C404) DC(D432):DG(C403) DC(D433):DG(C402) chainA ( 81) CYS81 0 0 0 0 0 9 0 0 0 0 0 0 ( 86) ILE86 0 0 3 3 4 0 0 0 0 0 0 0 ( 87) GLN87 0 0 0 0 74 11 26 0 0 0 0 0 (119) GLU119 0 0 0 0 0 11 0 0 0 0 0 0 (121) VAL121 0 0 0 0 0 4 0 0 0 0 0 0 (163) ARG163 0 0 0 0 0 4 0 0 0 0 0 0 (165) ARG165 0 0 0 0 0 9 0 0 0 0 0 0 (237) SER237 0 0 0 0 10 3 7 0 0 0 0 0 (239) GLU239 0 0 0 0 0 0 4 0 0 0 0 0 (240) ARG240 0 0 0 8 24 0 0 0 0 0 0 0 (252) SER252 0 0 0 0 0 0 1 0 0 0 0 0 (254) TYR254 0 0 0 0 0 0 0 1 0 0 0 0 (260) ALA260 0 0 0 0 0 0 0 0 3 0 0 0 (261) LYS261 0 0 0 0 0 0 0 0 2 0 0 0 (304) ASN304 0 0 0 0 0 4 0 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpCqafsIQgkqkgfedsrgtlffdiarivrekkpkvvfmEnVknfashdngntlevvkntmneldysfhakvlnaldygipqkReRiymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvrlgivgkggSgeRiystrgiaitlSaYgggifAKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgNsvvinvlqyiaynigsslnfkpy >2uz4_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HHAI DNA METHYLTRANSFERASE R165N MUTANT COMPLEX WITH 13MER GCGC-GMGC OLIGONUCLEOTIDE AND SAH organism=HAEMOPHILUS PARAHAEMOLYTICUS DNA sequence DG(D422):DC(C413) DT(D423):DA(C412) DC(D424):DG(C411) DA(D425):DT(C410) DG(D426):DC(C409) DG(D428):5CM(C407) DC(D429):DG(C406) DA(D430):DT(C405) DT(D431):DA(C404) DC(D432):DG(C403) DC(D433):DG(C402) chainA ( 86) ILE86 0 0 3 3 1 0 0 0 0 0 0 ( 87) SER87 0 0 0 0 8 8 0 0 0 0 0 (228) ARG228 0 0 0 1 0 0 0 0 0 0 0 (237) GLN237 0 0 0 0 32 23 0 0 0 0 0 (239) GLU239 0 0 0 0 0 4 0 0 0 0 0 (240) ARG240 0 0 0 10 11 0 0 0 0 0 0 (254) TYR254 0 0 0 0 0 0 1 0 0 0 0 (260) ALA260 0 0 0 0 0 0 0 1 0 0 0 (261) LYS261 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreniymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgeRiystrgiaitlsaYgggifAKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy >2uzk_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN FOXO3A-DBD BOUND TO DNA organism=HOMO SAPIENS DNA sequence DC(B1):DG(E37) DT(B2):DA(E36) DA(B3):DT(E35) DT(B4):DA(E34) DG(B5):DC(E33) DT(B6):DA(E32) DA(B7):DT(E31) DA(B8):DT(E30) DA(B9):DT(E29) DC(B10):DG(E28) DA(B11):DT(E27) DA(B12):DT(E26) DC(B13):DG(E25) chainA ( 52) ASN208 0 0 0 0 0 0 0 10 1 1 0 0 0 ( 53) SER209 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 55) ARG211 0 0 0 0 0 0 0 0 1 13 9 0 0 ( 56) HIS212 0 0 0 0 0 14 10 13 0 0 0 0 0 ( 59) SER215 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 93) ARG249 0 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence mgnlsyadlitraiesspdkrltlsqiyewmvrcvpyfkdkgdsnssagwkNSiRHnlSlhsrfmrvqnegtgksswwiinpdggksgkaprRravs >2v1u_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF THE AEROPYRUM PERNIX ORC1 PROTEIN IN COMPLEX WITH DNA organism=AEROPYRUM PERNIX DNA sequence DT(B1):DA(C22) DC(B2):DG(C21) DT(B3):DA(C20) DC(B4):DG(C19) DC(B5):DG(C18) DA(B6):DT(C17) DC(B7):DG(C16) DA(B8):DT(C15) DG(B9):DC(C14) DG(B10):DC(C13) DA(B11):DT(C12) DA(B12):DT(C11) DA(B13):DT(C10) DC(B14):DG(C9) DG(B15):DC(C8) DG(B16):DC(C7) DA(B17):DT(C6) DG(B18):DC(C5) DG(B19):DC(C4) DG(B20):DC(C3) DG(B21):DC(C2) DT(B22):DA(C1) chainA (110) THR122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 (326) THR343 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (328) ARG345 0 0 0 0 0 0 0 0 18 16 7 0 0 0 0 0 0 0 0 0 0 0 (329) ARG346 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 (349) SER366 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) ARG369 0 0 8 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (355) LYS372 0 0 0 0 1 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence leskifrkrwvllpdyvpdvlphreaelrrlaevlapalrgekpsnallygltgtgktavarlvlrrlearasslgvlvkpiyvnarhretpyrvasaiaeavgvrvpfTglsvgevyerlvkrlsrlrgiyiivldeidflpkrpggqdllyritrinqelvslvgitnslgfvenleprvksslgevelvfppytapqlrdiletraeeafnpgvldpdvvplcaalaarehgdarraldllrvageiaerrreervrrehvysaraeierdrvsevvrtlplhaklvllsimmledggrpastgeiyerykeltstlglehvTlRRvsgiiseldmlgivksrvvSrgRygKtrevsldadrlavenalsedpfvarll >2v2t_AB: title=X-RAY STRUCTURE OF A NF-KB P50-RELB-DNA COMPLEX organism=MUS MUSCULUS DNA sequence DG(C3):DC(D23) DG(C4):DC(D22) DG(C5):DC(D21) DA(C6):DT(D20) DA(C7):DT(D19) DT(C8):DA(D18) DT(C9):DA(D17) DC(C10):DG(D16) DC(C11):DG(D15) DC(C12):DG(D14) chainA ( 18) ARG117 0 0 0 0 0 0 0 2 8 8 ( 20) ARG119 0 0 0 0 0 0 0 0 0 14 ( 21) TYR120 0 0 0 0 0 0 8 2 0 0 ( 23) CYS122 0 0 0 0 0 0 0 1 0 0 ( 24) GLU123 0 0 0 0 0 0 0 1 7 0 (175) LYS274 0 0 0 0 0 0 3 0 0 0 chainB ( 17) ARG54 0 1 4 5 0 0 0 0 0 0 ( 19) ARG56 5 11 2 0 0 0 0 0 0 0 ( 20) TYR57 0 0 0 6 6 0 0 0 0 0 ( 22) CYS59 0 0 0 1 0 0 0 0 0 0 ( 23) GLU60 0 0 4 7 0 0 0 0 0 0 ( 27) HIS64 12 5 0 0 0 0 0 0 0 0 (204) LYS241 0 0 0 5 2 0 0 0 0 0 prot.sequence cprpylviteqpkqrgmRfRYeCEgrsagsilgessteasktqpaielrdcgglrevevtaclvwkdwphrvhphslvgkdctdgvcrvrlrphvsprhsfnnlgiqcvrkkeieaaierkiqlgidpynagslknhqevdmnvvricfqasyrdqqghlhrmdpilsepvydkKstntselricrinkesgpctggeelyllcdkvqkedisvvfstaswegradfsqadvhrqiaivfktppyedleisepvtvnvflqrltdgvcseplpftylpr/dgpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >2v2t_B:p53-like_transcription_factors;E_set_domains; title=X-RAY STRUCTURE OF A NF-KB P50-RELB-DNA COMPLEX organism=MUS MUSCULUS DNA sequence DG(D14):DC(C12) DG(D15):DC(C11) DG(D16):DC(C10) DA(D17):DT(C9) DA(D18):DT(C8) DT(D19):DA(C7) DT(D20):DA(C6) DC(D21):DG(C5) DC(D22):DG(C4) DC(D23):DG(C3) chainB ( 17) ARG54 0 0 0 0 0 0 5 4 1 0 ( 19) ARG56 0 0 0 0 0 0 0 2 11 5 ( 20) TYR57 0 0 0 0 0 6 6 0 0 0 ( 22) CYS59 0 0 0 0 0 0 1 0 0 0 ( 23) GLU60 0 0 0 0 0 0 7 4 0 0 ( 27) HIS64 0 0 0 0 0 0 0 0 5 12 (204) LYS241 0 0 0 0 0 2 5 0 0 0 prot.sequence dgpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >2v4q_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POST-INSERTION COMPLEX OF THE Y-FAMILY DNA POLYMERASE DPO4 WITH M1DG CONTAINING TEMPLATE DNA organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) DC(P14):DC(T4) chainA ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (184) PRO184 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (336) ARG336 0 0 0 0 0 0 0 0 0 0 0 3 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvPgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2v4r_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=NON-PRODUCTIVE COMPLEX OF THE Y-FAMILY DNA POLYMERASE DPO4 WITH DGTP SKIPPING THE M1DG ADDUCT TO PAIR WITH THE NEXT TEMPLATE CYTOSINE organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(T6):DC(P13) DA(T7):DT(P12) DA(T8):DT(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA (337) ARG337 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2v6e_AB: title=PROTELOMERASE TELK COMPLEXED WITH SUBSTRATE DNA organism=KLEBSIELLA PHAGE PHIKO2 DNA sequence DC(F26):DG(E25) DA(F27):DT(E24) DC(F28):DG(E23) DA(F29):DT(E22) DC(F30):DG(E21) DA(F31):DT(E20) DA(F32):DT(E19) DT(F33):DA(E18) DT(F34):DA(E17) DG(F35):DC(E16) DC(F36):DG(E15) DC(F37):DG(E14) DC(F38):DG(E13) DA(F39):DT(E12) DT(F40):DA(E11) DT(F41):DA(E10) DA(F42):DT(E9) DT(F43):DA(E8) DA(F44):DT(E7) DC(C1):DG(E6) DG(C2):DC(E5) DC(C3):DG(E4) DG(C4):DC(E3) DC(C5):DG(E2) DG(C6):DC(E1) DT(C7):DA(D44) DA(C8):DT(D43) DT(C9):DA(D42) DA(C10):DT(D41) DA(C11):DT(D40) DT(C12):DA(D39) DG(C13):DC(D38) DG(C14):DC(D37) DG(C15):DC(D36) DC(C16):DG(D35) DA(C17):DT(D34) DA(C18):DT(D33) DT(C19):DA(D32) DT(C20):DA(D31) DG(C21):DC(D30) DT(C22):DA(D29) DG(C23):DC(D28) DT(C24):DA(D27) DG(C25):DC(D26) chainA ( 61) ASN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) TYR69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) SER71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) GLN216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) TRP219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (297) LYS300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (354) ASN357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (355) ALA358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (358) ALA361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) THR362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 7 0 0 0 0 0 0 0 0 0 0 0 (362) ASN365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) ASP418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) THR421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) HIS424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) SER489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 (489) ARG492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 5 0 (495) THR498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 6 (496) ARG499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 chainB ( 61) ASN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) TYR69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) SER71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) GLN216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) TRP219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG259 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) LYS300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG350 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (354) ASN357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (355) ALA358 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ALA361 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) THR362 0 0 0 0 0 0 0 0 0 0 0 8 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (362) ASN365 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) ASP418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) THR421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) HIS424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) SER489 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (489) ARG492 0 5 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) THR498 6 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (496) ARG499 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vkigelinslvseveaidasdrpqgdktkkikaaalkyknalfndkrkfrgkglekrisaNTfNSYmSRarkrfddrlhhnfeknviklsekyplyseelsswlsmpaasirqhmsrlqaklkeimplaedlsnikigtknseakinklankypewqfaisdlnsedwkdkrdylyklfqqgsslledlnnlkvnhevlyhlqlssaeRtsiQqrWanvlsekkrnvvvidyprymqaiydiinkpivsfdlttrRgmaplafalaalsgrrmieimlqgefsvagkytvtflgqaKkRsedkgisrkiytlcdatlfvslvnelrscpaaadfdevikgygendtRsengriNAilATafNpwvktflgddrrvykdsraiyariayemffrvdprwknvdedvffmeilghdDenTqlHykqfklanfsrtwrpnvgeenarlaalqkldsmmpdfargdagvrihetvkqlveqdpsikitnStlRpfnfsTRliprylefaadalgqfvgengqwqlkdeapaivlp/vkigelinslvseveaidasdrpqgdktkkikaaalkyknalfndkrkfrgkglekrisaNTfNSYmSRarkrfddrlhhnfeknviklsekyplyseelsswlsmpaasirqhmsrlqaklkeimplaedlsnikigtknseakinklankypewqfaisdlnsedwkdkrdylyklfqqgsslledlnnlkvnhevlyhlqlssaeRtsiQqrWanvlsekkrnvvvidyprymqaiydiinkpivsfdlttrRgmaplafalaalsgrrmieimlqgefsvagkytvtflgqaKkRsedkgisrkiytlcdatlfvslvnelrscpaaadfdevikgygendtRsengriNAilATafNpwvktflgddrrvykdsraiyariayemffrvdprwknvdedvffmeilghdDenTqlHykqfklanfsrtwrpnvgeenarlaalqkldsmmpdfargdagvrihetvkqlveqdpsikitnStlRpfnfsTRliprylefaadalgqfvgengqwqlkdeapaivlp >2v6e_B: title=PROTELOMERASE TELK COMPLEXED WITH SUBSTRATE DNA organism=KLEBSIELLA PHAGE PHIKO2 DNA sequence DC(D26):DG(C25) DA(D27):DT(C24) DC(D28):DG(C23) DA(D29):DT(C22) DC(D30):DG(C21) DA(D31):DT(C20) DA(D32):DT(C19) DT(D33):DA(C18) DT(D34):DA(C17) DG(D35):DC(C16) DC(D36):DG(C15) DC(D37):DG(C14) DC(D38):DG(C13) DA(D39):DT(C12) DT(D40):DA(C11) DT(D41):DA(C10) DA(D42):DT(C9) DT(D43):DA(C8) DA(D44):DT(C7) DC(E1):DG(C6) DG(E2):DC(C5) DC(E3):DG(C4) DG(E4):DC(C3) DC(E5):DG(C2) DG(E6):DC(C1) DT(E7):DA(F44) DA(E8):DT(F43) DT(E9):DA(F42) DA(E10):DT(F41) DA(E11):DT(F40) DT(E12):DA(F39) DG(E13):DC(F38) DG(E14):DC(F37) DG(E15):DC(F36) DC(E16):DG(F35) DA(E17):DT(F34) DA(E18):DT(F33) DT(E19):DA(F32) DT(E20):DA(F31) DG(E21):DC(F30) DT(E22):DA(F29) DG(E23):DC(F28) DT(E24):DA(F27) DG(E25):DC(F26) chainB ( 61) ASN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) TYR69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) SER71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) GLN216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) TRP219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (297) LYS300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (354) ASN357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (355) ALA358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (358) ALA361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) THR362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 8 0 0 0 0 0 0 0 0 0 0 0 (362) ASN365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) ASP418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) THR421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) HIS424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) SER489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 (489) ARG492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 5 0 (495) THR498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 6 (496) ARG499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence vkigelinslvseveaidasdrpqgdktkkikaaalkyknalfndkrkfrgkglekrisaNTfNSYmSRarkrfddrlhhnfeknviklsekyplyseelsswlsmpaasirqhmsrlqaklkeimplaedlsnikigtknseakinklankypewqfaisdlnsedwkdkrdylyklfqqgsslledlnnlkvnhevlyhlqlssaeRtsiQqrWanvlsekkrnvvvidyprymqaiydiinkpivsfdlttrRgmaplafalaalsgrrmieimlqgefsvagkytvtflgqaKkRsedkgisrkiytlcdatlfvslvnelrscpaaadfdevikgygendtRsengriNAilATafNpwvktflgddrrvykdsraiyariayemffrvdprwknvdedvffmeilghdDenTqlHykqfklanfsrtwrpnvgeenarlaalqkldsmmpdfargdagvrihetvkqlveqdpsikitnStlRpfnfsTRliprylefaadalgqfvgengqwqlkdeapaivlp >2v9w_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=COMPLEX STRUCTURE OF SULFOLOBUS SOLFATARICUS DPO4 AND DNA DUPLEX CONTAINING A HYDROPHOBIC THYMINE ISOSTERE 2,4-DIFLUOROTOLUENE NUCLEOTIDE IN THE TEMPLATE STRAND organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(D5):DCT(A1347) DA(D7):DT(C12) DG(D8):DC(C11) DT(D9):DA(C10) DC(D10):DG(C9) DC(D11):DG(C8) DT(D12):DA(C7) DT(D13):DA(C6) DC(D14):DG(C5) DC(D15):DG(C4) DC(D16):DG(C3) DC(D17):DG(C2) DC(D18):DG(C1) chainA ( 7) ASP7 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) TYR10 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) PHE11 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL32 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA44 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR45 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) TYR48 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG51 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 4 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP105 7 0 0 0 0 0 0 0 0 0 0 0 0 (159) LYS159 9 0 0 0 0 0 0 0 0 0 0 0 0 (244) SER244 0 0 0 3 0 0 0 0 0 0 0 0 0 (336) ARG336 0 1 4 2 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvAtanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfiea >2va2_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=COMPLEX STRUCTURE OF SULFOLOBUS SOLFATARICUS DPO4 AND DNA DUPLEX CONTAINING A HYDROPHOBIC THYMINE ISOSTERE 2,4-DIFLUOROTOLUENE NUCLEOTIDE IN THE TEMPLATE STRAND organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(F5):DCT(E1014) DA(F7):DT(E12) DG(F8):DC(E11) DT(F9):DA(E10) DC(F10):DG(E9) DC(F11):DG(E8) DT(F12):DA(E7) DT(F13):DA(E6) DC(F14):DG(E5) DC(F15):DG(E4) DC(F16):DG(E3) DC(F17):DG(E2) DC(F18):DG(E1) chainB ( 8) ASP7 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ASP9 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) TYR10 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) VAL32 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ALA42 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ALA44 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) THR45 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR48 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG51 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ALA57 4 0 0 0 0 0 0 0 0 0 0 0 0 (106) ASP105 3 0 0 0 0 0 0 0 0 0 0 0 0 (160) LYS159 7 0 0 0 0 0 0 0 0 0 0 0 0 (245) SER244 0 0 0 1 0 0 0 0 0 0 0 0 0 (337) ARG336 0 2 5 1 0 0 0 0 0 0 0 0 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvAtanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfie >2va3_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=COMPLEX STRUCTURE OF SULFOLOBUS SOLFATARICUS DPO4 AND DNA DUPLEX CONTAINING A HYDROPHOBIC THYMINE ISOSTERE 2,4-DIFLUOROTOLUENE NUCLEOTIDE IN THE TEMPLATE STRAND organism=SULFOLOBUS SOLFATARICUS DNA sequence DT(T6):DA(P13) DA(T7):DT(P12) DG(T8):DC(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA (297) SER297 0 0 0 0 1 0 0 0 0 0 0 0 0 (336) ARG336 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivSrgrtfphgisketaysesvkllqkileederkirrigvRfskfie >2vbj_AB:Homing_endonucleases; title=MOLECULAR BASIS OF HUMAN XPC GENE RECOGNITION AND CLEAVAGE BY ENGINEERED HOMING ENDONUCLEASE HETERODIMERS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(C1):DA(E24) DC(C2):DG(E23) DT(C3):DA(E22) DG(C4):DC(E21) DC(C5):DG(E20) DC(C6):DG(E19) DT(C7):DA(E18) DT(C8):DA(E17) DT(C9):DA(E16) DT(C10):DA(E15) DT(C11):DA(E14) DT(C12):DA(E13) DG(C13):DC(E12) DA(C14):DT(E11) DA(C15):DT(E10) DG(C16):DC(E9) DG(C17):DC(E8) DA(C18):DT(E7) DT(C19):DA(E6) DC(C20):DG(E5) DC(C21):DG(E4) DT(C22):DA(E3) DA(C23):DT(E2) DA(C24):DT(E1) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 ( 27) GLU28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 0 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 16 0 ( 37) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 8 0 0 ( 39) LYS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 0 0 0 0 ( 43) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 ( 69) GLU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER33 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG38 0 0 13 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS40 0 0 0 0 8 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiEpNqSYkfkhRlKltfKvTqktqrrwfldklvdeigvgyvRdEgSVsNyilseikplrnfltqlqpflklkqkqanlvlkiteqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdadgSiIaQiepNqSSkfkhRlKltfQvTqktqrrwfldklvdeigvgYvRdSgSVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >2vbj_B:Homing_endonucleases; title=MOLECULAR BASIS OF HUMAN XPC GENE RECOGNITION AND CLEAVAGE BY ENGINEERED HOMING ENDONUCLEASE HETERODIMERS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(C1):DA(E24) DC(C2):DG(E23) DT(C3):DA(E22) DG(C4):DC(E21) DC(C5):DG(E20) DC(C6):DG(E19) DT(C7):DA(E18) DT(C8):DA(E17) DT(C9):DA(E16) DT(C10):DA(E15) DT(C11):DA(E14) DT(C12):DA(E13) DG(C13):DC(E12) DA(C14):DT(E11) DA(C15):DT(E10) DG(C16):DC(E9) DG(C17):DC(E8) DA(C18):DT(E7) DT(C19):DA(E6) DC(C20):DG(E5) DC(C21):DG(E4) DT(C22):DA(E3) DA(C23):DT(E2) DA(C24):DT(E1) chainB ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER33 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG38 0 0 13 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS40 0 0 0 0 8 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdadgSiIaQiepNqSSkfkhRlKltfQvTqktqrrwfldklvdeigvgYvRdSgSVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >2vbl_A:Homing_endonucleases; title=MOLECULAR BASIS OF HUMAN XPC GENE RECOGNITION AND CLEAVAGE BY ENGINEERED HOMING ENDONUCLEASE HETERODIMERS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(E1):DA(T24) DT(E2):DA(T23) DA(E3):DT(T22) DG(E4):DC(T21) DG(E5):DC(T20) DA(E6):DT(T19) DT(E7):DA(T18) DC(E8):DG(T17) DC(E9):DG(T16) DT(E10):DA(T15) DT(E11):DA(C14) DC(E12):DG(C13) DA(E13):DT(C12) DA(E14):DT(C11) DA(S15):DT(C10) DA(S16):DT(C9) DA(S17):DT(C8) DA(S18):DT(C7) DG(S19):DC(C6) DG(S20):DC(C5) DC(S21):DG(C4) DA(S22):DT(C3) DG(S23):DC(C2) DA(S24):DT(C1) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) GLU28 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 15 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG38 0 0 4 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS40 0 0 0 0 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS44 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) GLU70 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiEpNaSYkfkhRlKltfKvTqktqrrwfldklvdeigvgyvRdEgSVsNyilseikplrnfltqlqpflklkqkqanlvlkiteqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >2vbl_AB:Homing_endonucleases; title=MOLECULAR BASIS OF HUMAN XPC GENE RECOGNITION AND CLEAVAGE BY ENGINEERED HOMING ENDONUCLEASE HETERODIMERS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(E1):DA(T24) DT(E2):DA(T23) DA(E3):DT(T22) DG(E4):DC(T21) DG(E5):DC(T20) DA(E6):DT(T19) DT(E7):DA(T18) DC(E8):DG(T17) DC(E9):DG(T16) DT(E10):DA(T15) DT(E11):DA(C14) DC(E12):DG(C13) DA(E13):DT(C12) DA(E14):DT(C11) DA(S15):DT(C10) DA(S16):DT(C9) DA(S17):DT(C8) DA(S18):DT(C7) DG(S19):DC(C6) DG(S20):DC(C5) DC(S21):DG(C4) DA(S22):DT(C3) DG(S23):DC(C2) DA(S24):DT(C1) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) GLU28 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 15 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG38 0 0 4 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS40 0 0 0 0 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS44 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) GLU70 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 ( 37) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 17 18 0 0 ( 39) LYS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiEpNaSYkfkhRlKltfKvTqktqrrwfldklvdeigvgyvRdEgSVsNyilseikplrnfltqlqpflklkqkqanlvlkiteqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdadgSiIaQiapNqSskfkhRlKltfQvTqktqrrwfldklvdeigvgYvrgSgSVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >2vbn_A:Homing_endonucleases; title=MOLECULAR BASIS OF HUMAN XPC GENE RECOGNITION AND CLEAVAGE BY ENGINEERED HOMING ENDONUCLEASE HETERODIMERS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(E1):DA(S24) DC(E2):DG(S23) DT(E3):DA(S22) DG(E4):DC(S21) DC(E5):DG(S20) DC(E6):DG(S19) DT(E7):DA(S18) DT(E8):DA(S17) DT(E9):DA(S16) DT(E10):DA(S15) DT(E11):DA(C14) DT(E12):DA(C13) DG(E13):DC(C12) DA(E14):DT(C11) DA(T15):DT(C10) DG(T16):DC(C9) DG(T17):DC(C8) DA(T18):DT(C7) DT(T19):DA(C6) DC(T20):DG(C5) DC(T21):DG(C4) DT(T22):DA(C3) DA(T23):DT(C2) DA(T24):DT(C1) chainA ( 22) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ILE24 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) GLN26 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS28 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER32 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG38 0 0 14 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) THR46 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) TYR66 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG68 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) SER70 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) SER72 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (139) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) THR140 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mntkynkefllylagfvdgdgSiIaQiKpnqSskfkhRlsltfQvTqktqrrwfldklvdeigvgYvRdSgSVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >2vbn_AB:Homing_endonucleases; title=MOLECULAR BASIS OF HUMAN XPC GENE RECOGNITION AND CLEAVAGE BY ENGINEERED HOMING ENDONUCLEASE HETERODIMERS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(C1):DA(T24) DT(C2):DA(T23) DA(C3):DT(T22) DG(C4):DC(T21) DG(C5):DC(T20) DA(C6):DT(T19) DT(C7):DA(T18) DC(C8):DG(T17) DC(C9):DG(T16) DT(C10):DA(T15) DT(C11):DA(E14) DC(C12):DG(E13) DA(C13):DT(E12) DA(C14):DT(E11) DA(S15):DT(E10) DA(S16):DT(E9) DA(S17):DT(E8) DA(S18):DT(E7) DG(S19):DC(E6) DG(S20):DC(E5) DC(S21):DG(E4) DA(S22):DT(E3) DG(S23):DC(E2) DA(S24):DT(E1) chainA ( 22) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 24) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 26) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 ( 28) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 0 ( 32) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 ( 38) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 14 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 ( 46) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 66) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 68) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 ( 70) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 72) SER72 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 73) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (139) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (140) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) GLU28 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 18 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG38 0 0 3 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS40 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS44 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) SER68 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mntkynkefllylagfvdgdgSiIaQiKpnqSskfkhRlsltfQvTqktqrrwfldklvdeigvgYvRdSgSVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiEpNqSYkfkhRlKltfKvTqktqrrwfldklvdeigvgyvSdSgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >2vbo_A:Homing_endonucleases; title=MOLECULAR BASIS OF HUMAN XPC GENE RECOGNITION AND CLEAVAGE BY ENGINEERED HOMING ENDONUCLEASE HETERODIMERS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(E1):DA(C24) DC(E2):DG(C23) DT(E3):DA(C22) DG(E4):DC(C21) DC(E5):DG(C20) DC(E6):DG(C19) DT(E7):DA(C18) DT(E8):DA(C17) DT(E9):DA(C16) DT(E10):DA(C15) DT(E11):DA(C14) DT(E12):DA(C13) DG(E13):DC(C12) DA(E14):DT(C11) DA(E15):DT(C10) DG(E16):DC(C9) DG(E17):DC(C8) DA(E18):DT(C7) DT(E19):DA(C6) DC(E20):DG(C5) DC(E21):DG(C4) DT(E22):DA(C3) DA(E23):DT(C2) DA(E24):DT(C1) chainA ( 22) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ILE24 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) GLN26 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS28 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER32 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG38 0 0 17 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) THR46 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) TYR66 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG68 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) SER70 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ILE77 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) THR140 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mntkynkefllylagfvdgdgSiIaQiKpnqSskfkhRlsltfQvTqktqrrwfldklvdeigvgYvRdSgSVsNyIlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >2vbo_AB:Homing_endonucleases; title=MOLECULAR BASIS OF HUMAN XPC GENE RECOGNITION AND CLEAVAGE BY ENGINEERED HOMING ENDONUCLEASE HETERODIMERS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(E1):DA(C24) DC(E2):DG(C23) DT(E3):DA(C22) DG(E4):DC(C21) DC(E5):DG(C20) DC(E6):DG(C19) DT(E7):DA(C18) DT(E8):DA(C17) DT(E9):DA(C16) DT(E10):DA(C15) DT(E11):DA(C14) DT(E12):DA(C13) DG(E13):DC(C12) DA(E14):DT(C11) DA(E15):DT(C10) DG(E16):DC(C9) DG(E17):DC(C8) DA(E18):DT(C7) DT(E19):DA(C6) DC(E20):DG(C5) DC(E21):DG(C4) DT(E22):DA(C3) DA(E23):DT(C2) DA(E24):DT(C1) chainA ( 22) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ILE24 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) GLN26 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS28 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER32 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG38 0 0 17 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) THR46 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) TYR66 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG68 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) SER70 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ILE77 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) THR140 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 1 0 0 0 0 0 ( 27) GLU28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 0 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 18 0 ( 37) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 4 0 0 ( 39) LYS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 6 0 0 0 ( 43) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 ( 67) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 prot.sequence mntkynkefllylagfvdgdgSiIaQiKpnqSskfkhRlsltfQvTqktqrrwfldklvdeigvgYvRdSgSVsNyIlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiEpnqSYkfkhRlKltfKvTqktqrrwfldklvdeigvgyvSdsgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >2ve9_AF:"Winged_helix"_DNA-binding_domain; title=XRAY STRUCTURE OF KOPS BOUND GAMMA DOMAIN OF FTSK (P. AERUGINOSA) organism=PSEUDOMONAS AERUGINOSA DNA sequence DC(J3):DG(I14) DG(J4):DC(I13) DC(J5):DG(I12) DC(J6):DG(I11) DC(J7):DG(I10) DT(J8):DA(I9) DG(J9):DC(I8) DC(J10):DG(I7) DC(J11):DG(I6) DC(J12):DG(I5) DT(J13):DA(I4) DG(J14):DC(I3) DG(J15):DC(I2) DC(K2):DG(L15) DC(K3):DG(L14) DA(K4):DT(L13) DG(K5):DC(L12) DG(K6):DC(L11) DG(K7):DC(L10) DC(K8):DG(L9) DA(K9):DT(L8) DG(K10):DC(L7) DG(K11):DC(L6) DG(K12):DC(L5) DC(K13):DG(L4) DG(K14):DC(L3) chainA ( 21) SER766 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN769 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR776 0 0 0 0 0 0 0 10 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN777 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) GLN769 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 32) TYR776 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 9 0 0 0 0 0 0 0 prot.sequence ddplydeavrfvtesrrasiSavQrklkigYNraarmieamemagvvtpmntngsreviapa/eddplydeavrfvtesrrasisavQrklkigYnraarmieamemagvvtpmntngsreviapa >2ve9_BC:"Winged_helix"_DNA-binding_domain; title=XRAY STRUCTURE OF KOPS BOUND GAMMA DOMAIN OF FTSK (P. AERUGINOSA) organism=PSEUDOMONAS AERUGINOSA DNA sequence DC(I2):DG(J15) DC(I3):DG(J14) DA(I4):DT(J13) DG(I5):DC(J12) DG(I6):DC(J11) DG(I7):DC(J10) DC(I8):DG(J9) DA(I9):DT(J8) DG(I10):DC(J7) DG(I11):DC(J6) DG(I12):DC(J5) DC(I13):DG(J4) DG(I14):DC(J3) chainB ( 20) SER766 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 30) TYR776 0 0 0 0 0 0 0 3 10 0 0 0 0 chainC ( 21) SER766 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 24) GLN769 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 31) TYR776 0 0 0 0 0 0 0 0 7 8 12 0 0 ( 32) ASN777 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence dplydeavrfvtesrrasiSavQrklkigYnraarmieamemagvvtpmntngsreviapa/ddplydeavrfvtesrrasiSavQrklkigYNraarmieamemagvvtpmntngsreviapa >2ve9_C:"Winged_helix"_DNA-binding_domain; title=XRAY STRUCTURE OF KOPS BOUND GAMMA DOMAIN OF FTSK (P. AERUGINOSA) organism=PSEUDOMONAS AERUGINOSA DNA sequence DC(J3):DG(I14) DG(J4):DC(I13) DC(J5):DG(I12) DC(J6):DG(I11) DC(J7):DG(I10) DT(J8):DA(I9) DG(J9):DC(I8) DC(J10):DG(I7) DC(J11):DG(I6) DC(J12):DG(I5) DT(J13):DA(I4) DG(J14):DC(I3) DG(J15):DC(I2) chainC ( 21) SER766 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN769 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 31) TYR776 0 0 12 8 7 0 0 0 0 0 0 0 0 ( 32) ASN777 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence ddplydeavrfvtesrrasiSavQrklkigYNraarmieamemagvvtpmntngsreviapa >2ve9_DE:"Winged_helix"_DNA-binding_domain; title=XRAY STRUCTURE OF KOPS BOUND GAMMA DOMAIN OF FTSK (P. AERUGINOSA) organism=PSEUDOMONAS AERUGINOSA DNA sequence DC(K2):DG(L15) DC(K3):DG(L14) DA(K4):DT(L13) DG(K5):DC(L12) DG(K6):DC(L11) DG(K7):DC(L10) DC(K8):DG(L9) DA(K9):DT(L8) DG(K10):DC(L7) DG(K11):DC(L6) DG(K12):DC(L5) DC(K13):DG(L4) DG(K14):DC(L3) chainD ( 20) SER766 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 23) GLN769 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 30) TYR776 0 0 0 0 0 0 0 0 7 7 11 0 0 ( 31) ASN777 0 0 0 0 0 0 0 0 1 0 0 0 0 chainE ( 20) SER766 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 30) TYR776 0 0 0 0 0 0 0 3 10 0 0 0 0 prot.sequence dplydeavrfvtesrrasiSavQrklkigYNraarmieamemagvvtpmntngsreviapap/dplydeavrfvtesrrasiSavQrklkigYnraarmieamemagvvtpmntngsreviapap >2vla_A: title=CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE BPUJI RECOGNITION DOMAIN IN COMPLEX WITH COGNATE DNA organism=BACILLUS PUMILUS DNA sequence DT(M201):DA(L112) DC(M202):DG(L111) DC(M203):DG(L110) DA(M204):DT(L109) DC(M205):DG(L108) DG(M206):DC(L107) DG(M207):DC(L106) DG(M208):DC(L105) DT(M209):DA(L104) DA(M210):DT(L103) DC(M211):DG(L102) DC(M212):DG(L101) chainA ( 15) ARG15 0 0 0 11 11 24 0 0 0 0 0 0 ( 17) LYS17 0 0 0 0 1 4 0 0 0 0 0 0 ( 63) LYS63 0 0 0 0 0 1 12 8 8 0 0 0 ( 64) THR64 0 0 0 0 0 4 0 0 0 0 0 0 ( 67) ASN67 0 0 0 0 0 7 7 7 0 0 0 0 ( 70) THR70 0 0 0 0 0 0 0 1 0 0 0 0 ( 71) GLU71 0 0 0 0 0 3 10 9 0 0 0 0 (121) LYS121 0 0 0 0 0 0 0 0 0 5 3 0 (202) GLU202 0 0 0 2 0 0 0 0 0 0 0 0 (204) SER204 0 0 2 6 0 0 0 0 0 0 0 0 (208) GLN208 0 0 13 11 0 0 0 0 0 0 0 0 prot.sequence mnynpeeqfrctiiRgKakNmldnllpayaniiddicpcdkasfvkdfnnrlieilgeettkKTldNhrTEiagklfgmfyeddevifpsgrtnkyiedsdqpaffkdicfkfqfpngmdKldkviekvgakiqirqfpyilqvlltadnnniqlskddiayyvlnslqvlqgkikpieviekiiedrsnditkkvrhpgkEtSysmQhireqlnylelanliridgnlvklnyreaeninyiaqfwgnkpefnaykydftseddkksffkdwqqyysnv >2voa_AB:DNase_I-like; title=STRUCTURE OF AN AP ENDONUCLEASE FROM ARCHAEOGLOBUS FULGIDUS organism=ARCHAEOGLOBUS FULGIDUS DNA sequence DG(C1):DC(D10) DC(C2):DG(D9) DG(C3):DC(D8) DG(C4):DC(D7) DT(C5):DA(D6) DA(C6):DT(D5) DG(C7):DC(D4) DC(C8):DG(D3) DC(C9):DG(D2) DG(C10):DC(D1) chainA (202) TYR203 5 0 0 0 0 0 0 0 0 0 (203) ARG204 46 0 0 0 0 0 0 0 0 0 chainB (202) TYR203 0 0 0 0 0 0 0 0 0 7 (203) ARG204 0 0 0 0 0 0 0 0 0 54 prot.sequence mlkiatfnvNsirsrlhivipwlkenkpdilcmqetkvenrkfpeadfhrigyhvvfsgskgrngvaiasleepedvsfgldsepkdedrlirakiagidvintyvpqgfkidsekyqyklqwlerlyhylqktvdfrsfavwcgdmnvapepidvhspdklknhvfhedarraykkilelgfvdvlrkihpneriytfydYRvkgaierglgwrgdailatpplaercvdcyadikprlaekpsdhlplvavfdv/mlkiatfnvNsirsrlhivipwlkenkpdilcmqetkvenrkfpeadfhrigyhvvfsgskgrngvaiasleepedvsfgldsepkdedrlirakiagidvintyvpqgfkidsekyqyklqwlerlyhylqktvdfrsfavwcgdmnvapepidvhspdklknhvfhedarraykkilelgfvdvlrkihpneriytfyDYRvkgaierglgwrgdailatpplaercvdcyadikprlaekpsdhlplvavfdv >2voa_B:DNase_I-like; title=STRUCTURE OF AN AP ENDONUCLEASE FROM ARCHAEOGLOBUS FULGIDUS organism=ARCHAEOGLOBUS FULGIDUS DNA sequence DG(C1):DC(D10) DC(C2):DG(D9) DG(C3):DC(D8) DG(C4):DC(D7) DT(C5):DA(D6) DA(C6):DT(D5) DG(C7):DC(D4) DC(C8):DG(D3) DC(C9):DG(D2) DG(C10):DC(D1) chainB (202) TYR203 0 0 0 0 0 0 0 0 0 7 (203) ARG204 0 0 0 0 0 0 0 0 0 54 prot.sequence mlkiatfnvNsirsrlhivipwlkenkpdilcmqetkvenrkfpeadfhrigyhvvfsgskgrngvaiasleepedvsfgldsepkdedrlirakiagidvintyvpqgfkidsekyqyklqwlerlyhylqktvdfrsfavwcgdmnvapepidvhspdklknhvfhedarraykkilelgfvdvlrkihpneriytfyDYRvkgaierglgwrgdailatpplaercvdcyadikprlaekpsdhlplvavfdv >2vs7_A:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH DNA AND CA organism=DESULFUROCOCCUS MOBILIS DNA sequence DG(B1):DC(C25) DC(B2):DG(C24) DC(B3):DG(C23) DT(B4):DA(C22) DT(B5):DA(C21) DG(B6):DC(C20) DC(B7):DG(C19) DC(B8):DG(C18) DG(B9):DC(C17) DG(B10):DC(C16) DG(B11):DC(C15) DT(B12):DA(C14) DA(B13):DT(C13) DA(B14):DT(C12) DG(B15):DC(C11) DT(B16):DA(C10) DT(B17):DA(C9) DC(B18):DG(C8) DC(B19):DG(C7) DG(B20):DC(C6) DG(B21):DC(C5) DC(B22):DG(C4) DG(B23):DC(C3) DC(B24):DG(C2) DG(B25):DC(C1) chainA ( 22) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 ( 24) LEU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 26) TYR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 3 2 0 0 0 0 ( 30) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 16 6 0 0 ( 31) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 32) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 6 0 0 0 0 ( 34) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 6 1 0 0 0 0 0 ( 36) VAL39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 38) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 ( 67) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 69) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 73) THR76 0 0 0 0 0 0 0 0 0 0 0 0 7 10 1 0 0 0 0 0 0 0 0 0 0 ( 74) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 8 15 6 1 0 0 0 0 0 0 0 0 ( 76) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 78) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 7 0 0 0 0 0 0 ( 80) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 (121) ARG124 0 0 0 0 19 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ARG126 0 0 0 0 0 0 1 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) TRP128 0 0 0 0 0 0 0 0 7 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ASP154 0 0 0 0 0 0 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) ASP155 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ARG157 0 0 0 0 0 0 0 0 16 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) HIS158 0 0 0 0 0 0 0 0 0 0 4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) VAL160 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nenvsgisayllgliigdgglYkLkYkgnRSEyRvViTqksenlikqhiaplmqflidelnvkskiQiVkgdTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnislrdrikfvhtilsshl >2vs8_K:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH DNA AND MN organism=DESULFUROCOCCUS MOBILIS DNA sequence DC(N1):DG(M25) DG(N2):DC(M24) DC(N3):DG(M23) DG(N4):DC(M22) DC(N5):DG(M21) DC(N6):DG(M20) DG(N7):DC(M19) DG(N8):DC(M18) DA(N9):DT(M17) DA(N10):DT(M16) DC(N11):DG(M15) DT(N12):DA(L14) DT(N13):DA(L13) DA(N14):DT(L12) DC(N15):DG(L11) DC(O16):DG(L10) DC(O17):DG(L9) DG(O18):DC(L8) DG(O19):DC(L7) DC(O20):DG(L6) DA(O21):DT(L5) DA(O22):DT(L4) DG(O23):DC(L3) DG(O24):DC(L2) DC(O25):DG(L1) chainK ( 20) TYR25 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU27 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) TYR29 0 0 0 0 2 5 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG33 0 0 5 14 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER34 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) GLU35 0 0 0 0 4 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG37 0 0 0 0 0 1 6 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) VAL39 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR41 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) GLN70 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) VAL72 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASP75 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) THR76 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG77 0 0 0 0 0 0 0 0 0 6 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLU79 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG81 0 0 0 0 0 0 7 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) SER83 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 11 10 0 0 0 0 (121) ARG126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 1 0 0 0 0 0 0 (123) TRP128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 8 0 0 0 0 0 0 0 0 (149) ASP154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 (150) ASP155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (152) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 16 0 0 0 0 0 0 0 0 (153) HIS158 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 (155) VAL160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (162) LEU167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence nvsgisayllgliigdgglYkLkYkgnRSEyRvViTqksenlikqhiaplmqflidelnvkskiQiVkgDTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnisLrdrikfvhtilsshl >2vtb_E:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=STRUCTURE OF CRYPTOCHROME 3 - DNA COMPLEX organism=? DNA sequence DT(K2) DT(K4) DT(K5) chainE (275) ARG276 2 0 0 (320) TRP321 2 0 0 (323) PHE324 5 0 0 (324) GLU325 11 0 0 (327) TRP328 40 0 0 (331) PHE332 1 0 0 (430) ASN431 1 0 0 (433) TYR434 1 0 0 (442) ARG443 0 6 0 (444) ASP445 0 0 1 (445) ARG446 0 7 0 (446) TYR447 0 0 3 (495) HIS496 0 0 27 prot.sequence dhihrvpalteeeidsvaiktferyalpssssvkrkgkgvtilwfrndlrvldndalykawsssdtilpvycldprlfhtthffnfpktgalrggflmeclvdlrknlmkrglnllirsgkpeeilpslakdfgartvfahketcseevdverlvnqglkrvgnstkleliwgstmyhkddlpfdvfdlpdvytqfrksveakcsirsstriplslgptpsvddwgdvptleklgvepqevtrgmrfvggesagvgrvfeyfwkkdllkvyketRngmlgpdystkfspwlafgcisprfiyeevqryekervannstyWvlFEliWrdyFrflsikcgnslfhlggprnvqgkwsqdqklfeswrdaktgyplidanmkelsttgfmsnrgrqivcsflvrdmgldwrmgaewfetclldydpcsnygNwtYgagvgndpReDRYfsipkqaqnydpegeyvafwlqqlrrlpkekrhwpgrlmymdtvvplkHg >2vum_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ALPHA-AMANITIN INHIBITED COMPLETE RNA POLYMERASE II ELONGATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T4):DT(N13) DG(T5):DC(N12) DC(T6):DG(N11) DT(T7):DA(N10) DC(T8):DG(N9) DA(T9):DT(N8) DA(T10):DT(N7) DG(T11):DC(N6) DT(T12):DA(N5) DA(T13):DT(N4) DG(T14):DC(N3) DT(T15):DA(N2) DT(T16):DA(N1) chainA (1349) ARG1386 0 0 0 0 0 0 0 0 0 0 0 3 3 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >2vum_AB: title=ALPHA-AMANITIN INHIBITED COMPLETE RNA POLYMERASE II ELONGATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T4):DT(N13) DG(T5):DC(N12) DC(T6):DG(N11) DT(T7):DA(N10) DC(T8):DG(N9) DA(T9):DT(N8) DA(T10):DT(N7) DG(T11):DC(N6) DT(T12):DA(N5) DA(T13):DT(N4) DG(T14):DC(N3) DT(T15):DA(N2) DT(T16):DA(N1) chainA (1349) ARG1386 0 0 0 0 0 0 0 0 0 0 0 3 3 chainB prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >2vw9_A:Nucleic_acid-binding_proteins; title=SINGLE STRANDED DNA BINDING PROTEIN COMPLEX FROM HELICOBACTER PYLORI organism=HELICOBACTER PYLORI DNA sequence DT(C32) DT(C31) DT(C30) DT(C26) DT(C25) DT(C24) DT(C1) DT(C2) DT(C3) DT(C4) DT(C5) DT(C7) DT(C8) DT(C9) DT(C14) DT(C15) DT(C16) DT(C18) DT(C19) DT(C20) DT(C21) DT(C22) DT(C23):DT(C24) chainA ( 10) ARG1010 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 12) THR1012 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 ( 18) LYS1018 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR1028 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ALA1032 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 38) LYS1038 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 48) VAL1048 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 50) PHE1050 0 0 0 0 0 0 0 0 0 0 0 34 8 0 0 0 0 0 0 0 0 0 0 ( 54) ARG1054 0 0 0 0 0 0 0 0 24 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE1056 0 0 0 0 0 0 0 38 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ILE1062 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) TYR1066 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG1078 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) GLU1082 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) TRP1084 0 0 0 0 0 0 0 0 0 52 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG1094 0 0 0 0 0 0 0 0 0 5 23 0 0 0 0 0 0 0 0 0 0 0 0 (103) GLN1103 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) PHE1104 34 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ASP1106 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) LYS1107 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mfnkvimvgRlTRnvelKylpsgsaaaTiglAtsrrfKkqdgtlgeeVcFiDaRlFgrtaeIanqYlskgssvliegRltyEsWmdqtgkknsRhtitadslQFmDKk >2vw9_AB:Nucleic_acid-binding_proteins; title=SINGLE STRANDED DNA BINDING PROTEIN COMPLEX FROM HELICOBACTER PYLORI organism=HELICOBACTER PYLORI DNA sequence DT(C32) DT(C31) DT(C30) DT(C26) DT(C25) DT(C24) DT(C1) DT(C2) DT(C3) DT(C4) DT(C5) DT(C7) DT(C8) DT(C9) DT(C14) DT(C15) DT(C16) DT(C18) DT(C19) DT(C20) DT(C21) DT(C22) DT(C23):DT(C24) chainA ( 10) ARG1010 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 12) THR1012 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 ( 18) LYS1018 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR1028 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ALA1032 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 38) LYS1038 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 48) VAL1048 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 50) PHE1050 0 0 0 0 0 0 0 0 0 0 0 34 8 0 0 0 0 0 0 0 0 0 0 ( 54) ARG1054 0 0 0 0 0 0 0 0 24 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE1056 0 0 0 0 0 0 0 38 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ILE1062 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) TYR1066 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG1078 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) GLU1082 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) TRP1084 0 0 0 0 0 0 0 0 0 52 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG1094 0 0 0 0 0 0 0 0 0 5 23 0 0 0 0 0 0 0 0 0 0 0 0 (103) GLN1103 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) PHE1104 34 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ASP1106 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) LYS1107 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) ARG2010 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) THR2012 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LYS2018 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 ( 20) LEU2020 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 ( 26) ALA2026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 28) THR2028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 32) ALA2032 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) LEU2044 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) VAL2048 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PHE2050 0 0 0 6 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG2054 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 3 0 ( 56) PHE2056 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 11 1 0 0 ( 62) ILE2062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 66) TYR2066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 78) ARG2078 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 82) GLU2082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 ( 84) TRP2084 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 8 ( 94) ARG2094 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 24 (103) GLN2103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 (104) PHE2104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 19 0 0 0 0 0 0 0 prot.sequence mfnkvimvgRlTRnvelKylpsgsaaaTiglAtsrrfKkqdgtlgeeVcFiDaRlFgrtaeIanqYlskgssvliegRltyEsWmdqtgkknsRhtitadslQFmDKk/mfnkvimvgRlTrnvelKyLpsgsaAaTiglAtsrrfkkqdgtLgeeVcFidaRlFgrtaeIanqYlskgssvliegRltyEsWmdqtgkknsRhtitadslQFm >2vwj_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=URACIL RECOGNITION IN ARCHAEAL DNA POLYMERASES CAPTURED BY X-RAY CRYSTALLOGRAPHY. organism=THERMOCOCCUS GORGONARIUS DNA sequence DG(B6):DC(B25) DA(B7):DT(B24) DC(B8):DG(B23) DA(B9):DT(B22) DC(B10):DG(B21) DG(B11):DC(B20) DG(B12):DC(B19) DC(B13):DG(B18) chainA (265) ARG265 7 0 0 0 0 0 0 0 (613) ARG613 0 0 16 8 2 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkidydrnfepyiyallkddsaiedvkkitaerhgttvrvvraekvkkkflgrpievwklyfthpqdvpairdkikehpavvdiyeydipfakrylidkglipmegdeelkmlafdietlyhegekfaegpilmisyadeegarvitwrnidlpyvdvvstekemikrflkvvkekdpdvlityngdnfafaylkkrseklgvkfilgregsepkiqrmgdrfavevkgrihfdlypviRrtinlptytleavyeaifgqpkekvyaeeiaqawetgeglervarysmedakvtyelgkeffpmeaqlsrlvgqslwdvsrsstgnlvewfllrkayernelapnkpderelarrresyaggyvkeperglwenivyldfrslypsiiithnvspdtlnregceeydvapqvghkfckdfpgfipsllgdlleerqkvkkkmkatidpiekklldyrqraikilansfygyygyakarwyckecaesvtawgrqyiettireieekfgfkvlyadtdgffatipgadaetvkkkakefldyinaklpglleleyegfykrgffvtkkkyavideedkittrgleivrRdwseiaketqarvleailkhgdveeavrivkevteklskyevppeklviyeqitrdlkdykatgphvavakrlaargikirpgtvisyivlkgsgrigdraipfdefdpakhkydaeyyienqvlpaverilrafgyrkedlry >2vy1_A:Homeodomain-like; title=STRUCTURE OF LEAFY TRANSCRIPTION FACTOR FROM ARABIDOPSIS THALIANA IN COMPLEX WITH DNA FROM AP1 PROMOTER organism=ARABIDOPSIS THALIANA DNA sequence DA(W1) DG(W2) DA(W3) DA(W4) DG(W5) DG(W6) DA(W7) DC(W8) DC(W9) DA(W10) DG(W11) DT(W12) DG(W13) DG(W14) DT(W15) DC(W16) DC(W17) DG(W18) DT(W19) DA(W20) chainA ( 1) ARG237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 ( 55) ASN291 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 ( 71) LYS307 0 0 0 0 0 0 0 0 0 0 0 0 5 12 8 0 0 0 0 0 ( 72) PRO308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 ( 75) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence RehpfivtepgevargkkngldylfhlyeqcrefllqvqtiakdrgekcptkvtNqvfryakksgasyinKPkmRhyvhcyalhcldeeasnalrrafkergenvgswrqacykplvniacrhgwdidavfnahprlsiwyvptklrqlchlernnavaaaaa >2vy2_A:Homeodomain-like; title=STRUCTURE OF LEAFY TRANSCRIPTION FACTOR FROM ARABIDOPSIS THALIANA IN COMPLEX WITH DNA FROM AG-I PROMOTER organism=ARABIDOPSIS THALIANA DNA sequence DA(W1) DT(W2) DT(W3) DT(W4) DA(W5) DA(W6) DT(W7) DC(W8) DC(W9) DA(W10) DA(W11) DT(W12) DG(W13) DG(W14) DT(W15) DT(W16) DA(W17) DC(W18) DA(W19) DA(W20) chainA ( 1) ARG237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 ( 55) ASN291 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 ( 71) LYS307 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 ( 72) PRO308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence RehpfivtepgevargkkngldylfhlyeqcrefllqvqtiakdrgekcptkvtNqvfryakksgasyinKPkmrhyvhcyalhcldeeasnalrrafkergenvgswrqacykplvniacrhgwdidavfnahprlsiwyvptklrqlchlernnavaaaaa >2vz4_A:Putative_DNA-binding_domain; title=THE N-TERMINAL DOMAIN OF MERR-LIKE PROTEIN TIPAL BOUND TO PROMOTER DNA organism=STREPTOMYCES LIVIDANS DNA sequence DC(B-11) DT(B-10) DC(B-9) DC(B-8) DT(B-7) DC(B-6) DA(B-5) DC(B-4) DG(B-3) DT(B-2) DC(B1) DA(B2) DC(B3) DG(B4) DT(B5) DG(B6) DA(B7) DG(B8) DG(B9) DT(B10) DG(B11) chainA ( 16) ARG17 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) HIS20 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sysvgqvagfagvtvRtlHhyddigllvpsershaghrrysdadldrlqqilfyrelgfpldevaallddrahlrrqhellsarigklqkmaaaveqame >2w36_A: title=STRUCTURES OF ENDONUCLEASE V WITH DNA REVEAL INITIATION OF DEAMINATED ADENINE REPAIR organism=THERMOTOGA MARITIMA DNA sequence DG(D18):DC(C5) DT(D19):DA(C4) DA(D20):BRU(C3) DG(D21):DC(C2) DC(D22):DG(C1) chainA ( 81) ILE81 4 0 0 0 0 ( 82) PRO82 10 0 0 0 0 prot.sequence mdyrqlhrwdlppeeaikvqnelrkkikltpyegepeyvagvalsfpgkeeglavivvleypsfkilevvsergeitfpyIPgllafregplflkaweklrtkpdvvvfdgqglahprklgiashmglfieiptigvaksrlygtfkmpedkrcswsylydgeeiigcvirtkegsapifvspghlmdvesskrlikaftlpgrripeptrlahiytqrlkkg >2w42_A:Ribonuclease_H-like; title=THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT DNA DUPLEX. organism=ARCHAEOGLOBUS FULGIDUS DNA sequence DT(P2):DA(Q13) DC(P3):DG(Q12) DG(P4):DC(Q11) DA(P5):DT(Q10) DC(P6):DG(Q9) chainA (133) ILE143 3 0 0 0 0 (138) ASN148 6 2 0 0 0 (141) PHE151 33 0 0 0 0 (142) TYR152 12 0 0 0 0 (145) ASN155 5 0 0 0 0 prot.sequence ltyrigngasvpisntgelikglrnygpyevpslkynqialihnnqfsslinqlksqisskidevwhihninisefiydsphfdsiksqvdnaidtgvdgimlvlpeyntplyyklksylinsipsqfmrydIlsnrNltFYvdNllvqfvsklggkpwilnvdpekgsdiiigtgatridnvnlfcfamvfkkdgtmlwneispivtsseyltylkstikkvvygfkksnpdwdvekltlhvsgkrpkmkdgetkilketveelkkqemvsrdvkyailhlnethpfwvmgyegtkvklsskrylltllqmvtpikplsveivsdnwtseeyyhnvheildeiyylskmnwrgfrsrnlpvtvnypklvagiianvnryggypirslqtnpwfl >2w7n_AB: title=CRYSTAL STRUCTURE OF KORA BOUND TO OPERATOR DNA: INSIGHT INTO REPRESSOR COOPERATION IN RP4 GENE REGULATION organism=ESCHERICHIA COLI DNA sequence DA(E1):DT(F18) DA(E2):BRU(F17) DT(E3):DA(F16) DG(E4):DC(F15) DT(E5):DA(F14) DT(E6):DA(F13) DT(E7):DA(F12) DA(E8):DT(F11) DG(E9):DC(F10) DC(E10):DG(F9) DT(E11):DA(F8) DA(E12):DT(F7) DA(E13):DT(F6) DA(E14):DT(F5) DC(E15):DG(F4) DA(E16):BRU(F3) DA(E17):BRU(F2) DG(E18):DC(F1) chainA ( 46) THR47 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 47) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 12 0 0 ( 49) ALA50 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 51) SER52 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 ( 52) GLN53 0 0 0 0 0 0 0 0 0 10 7 7 1 0 0 0 0 0 ( 56) ARG57 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB ( 45) THR47 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 46) ARG48 0 0 14 15 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ALA50 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 50) SER52 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN53 0 0 0 0 0 1 7 8 10 0 0 0 0 0 0 0 0 0 ( 55) ARG57 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence kkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweadakk/krltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweadakkkq >2w7n_B: title=CRYSTAL STRUCTURE OF KORA BOUND TO OPERATOR DNA: INSIGHT INTO REPRESSOR COOPERATION IN RP4 GENE REGULATION organism=ESCHERICHIA COLI DNA sequence DC(F1):DG(E18) BRU(F2):DA(E17) BRU(F3):DA(E16) DG(F4):DC(E15) DT(F5):DA(E14) DT(F6):DA(E13) DT(F7):DA(E12) DA(F8):DT(E11) DG(F9):DC(E10) DC(F10):DG(E9) DT(F11):DA(E8) DA(F12):DT(E7) DA(F13):DT(E6) DA(F14):DT(E5) DC(F15):DG(E4) DA(F16):DT(E3) BRU(F17):DA(E2) DT(F18):DA(E1) chainB ( 45) THR47 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 46) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 5 15 14 0 0 ( 48) ALA50 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 50) SER52 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 51) GLN53 0 0 0 0 0 0 0 0 0 10 8 7 1 0 0 0 0 0 ( 55) ARG57 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence krltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweadakkkq >2w7o_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE AND ACTIVITY OF BYPASS SYNTHESIS BY HUMAN DNA POLYMERASE KAPPA OPPOSITE THE 7,8-DIHYDRO-8-OXODEOXYGUANOSINE ADDUCT organism=HOMO SAPIENS DNA sequence DG(T6):DC(P13) DA(T7):DT(P12) DA(T8):DT(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA (327) SER415 0 0 0 1 0 0 0 0 0 0 0 0 0 (331) GLU419 1 0 0 0 0 0 0 0 0 0 0 0 0 (424) ARG512 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence kekinkiimeatkgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsmlstsnyharrfgvraampgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfikqnsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthltrdgerkSmsvErtfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiklknvnfevktrastvssvvstaeeifaiakellkteidadfphplrlrlmgvRissfpne >2w7p_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE AND ACTIVITY OF BYPASS SYNTHESIS BY HUMAN DNA POLYMERASE KAPPA OPPOSITE THE 7,8-DIHYDRO-8-OXODEOXYGUANOSINE ADDUCT organism=HOMO SAPIENS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) chainA (326) SER415 0 0 0 0 0 0 0 0 0 1 0 0 0 (330) GLU419 0 0 0 0 0 0 0 0 0 0 0 2 0 (380) THR469 0 0 0 0 0 0 0 2 0 0 0 0 0 (423) ARG512 0 0 0 0 0 0 0 0 0 3 0 0 0 prot.sequence kekinkiimeatkgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsmlstsnyharrfgvraampgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfiknsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthltrdgerkSmsvErtfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiklknvnfevkTrastvssvvstaeeifaiakellkteidadfphplrlrlmgvRissfpnee >2w8k_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=Y-FAMILY DNA POLYMERASE DPO4 BYPASSING N2-NAPHTHYL-GUANINE ADDUCT IN SYN ORIENTATION organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) chainA (286) HIS285 0 0 0 0 0 0 0 1 0 0 0 0 0 (337) ARG336 0 0 0 0 0 0 0 0 0 0 0 5 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2w8l_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=Y-FAMILY DNA POLYMERASE DPO4 BYPASSING N2-NAPHTHYL-GUANINE ADDUCT IN ANTI ORIENTATION organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) chainA (337) ARG336 0 0 0 0 0 0 0 0 0 0 0 3 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2w9a_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF DPO4 BOUND TO N2,N2-DIMETHYL-DEOXYGUANOSINE MODIFIED DNA WITH INCOMING DGTP organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) chainA (337) ARG336 0 0 0 0 0 0 0 0 0 0 0 3 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2w9b_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=BINARY COMPLEX OF DPO4 BOUND TO N2,N2-DIMETHYL-DEOXYGUANOSINE MODIFIED DNA organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(D1):DC(F18) DG(D2):DC(F17) DG(D3):DC(F16) DG(D4):DC(F15) DG(D5):DC(F14) DA(D6):DT(F13) DA(D7):DT(F12) DG(D8):DC(F11) DG(D9):DC(F10) DA(D10):DT(F9) DT(D11):DA(F8) DT(D12):DA(F7) DC(D13):DG(F6) chainB (296) ILE295 0 0 0 0 0 0 0 0 1 1 0 0 0 (298) SER297 0 0 0 0 0 0 0 1 1 0 0 0 0 (333) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 5 (337) ARG336 0 0 0 0 0 0 0 0 0 2 4 0 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklklginklvdtliefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrleeikpylfraieesyykldkripkaihvvavtedldIvSrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >2w9c_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF DPO4 BOUND TO N2,N2-DIMETHYL-DEOXYGUANOSINE MODIFIED DNA WITH INCOMING DTTP organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(C1):DC(E18) DG(C2):DC(E17) DG(C3):DC(E16) DG(C4):DC(E15) DG(C5):DC(E14) DA(C6):DT(E13) DA(C7):DT(E12) DG(C8):DC(E11) DG(C9):DC(E10) DA(C10):DT(E9) DT(C11):DA(E8) DT(C12):DA(E7) chainA (244) SER244 0 0 0 0 0 0 0 0 0 2 0 0 (248) ILE248 0 0 0 0 0 0 0 0 0 0 0 2 (297) SER297 0 0 0 0 0 0 0 0 2 0 0 0 (336) ARG336 0 0 0 0 0 0 0 0 0 6 5 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakarylislardeynepirtrvrkSigrIvtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivSrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >2wb2_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=DROSOPHILA MELANOGASTER (6-4) PHOTOLYASE BOUND TO DOUBLE STRANDED DNA CONTAINING A T(6-4)C PHOTOLESION organism=DROSOPHILA MELANOGASTER DNA sequence DC(C2):DG(D15) DA(C3):DT(D14) DG(C4):DC(D13) DC(C5):DG(D12) DG(C6):DC(D11) DG(C7):DC(D10) 64P(C8):DA(D9) Z(a9):DG(D8) DG(C10):DC(D7) DC(C11):DG(D6) DA(C12):DT(D5) DG(C13):DC(D4) DG(C14):DC(D3) DT(C15):DA(D2) chainA (245) LYS246 0 0 0 0 0 0 7 3 0 0 0 0 0 0 (246) PRO247 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (292) PRO293 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (298) GLN299 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (301) TRP302 0 0 0 0 0 0 24 0 0 0 0 0 0 0 (364) HIS365 0 0 0 0 0 0 13 6 0 0 0 0 0 0 (365) LEU366 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (368) HIS369 0 0 0 0 0 0 2 8 0 0 0 0 0 0 (405) ASN406 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (408) TRP409 0 0 0 0 0 0 6 3 0 0 0 0 0 0 (416) HIS417 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (417) GLN418 0 0 0 0 0 64 0 0 0 0 0 0 0 0 (419) PHE420 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (420) ARG421 0 0 0 0 0 0 0 0 18 0 0 0 0 0 (422) TYR423 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence dsqrstlvhwfrkglrlhdnpalshiftaanaapgryfvrpifildpgildwmqvganrwrflqqtledldnqlrklnsrlfvvrgkpaevfprifkswrvemltfetdiepysvtrdaavqklakaegvrvethcshtiynpelviaknlgkapityqkflgiveqlkvpkvlgvpeklknmptppkdeveqkdsaaydcptmkqlvkrpeelgpnkfpggetealrrmeeslkdeiwvarfekpntapnslepsttvlspylkfgclsarlfnqklkeiikrqpkhsqppvsligqlmwrefyytvaaaepnfdrmlgnvycmqipwqehpdhleawthgrtgypfidaimrqlrqegwihhlarhavacfltrgdlwisweegqrvfeqllldqdwalnagnwmwlsasaffHQyFRvyspvafgkktdpqghyirkyvpelskypagciyepwkaslvdqraygcvlgtdyphrivkhevvhkenikrmgaaykvnrevrtgke >2wbs_A:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF THE ZINC FINGER DOMAIN OF KLF4 BOUND TO ITS TARGET DNA organism=MUS MUSCULUS DNA sequence DG(G1):DC(F7) DC(G2):DG(F6) DG(G3):DC(F5) DC(G4):DG(F4) DC(G5):DG(F3) DT(G6):DA(F2) DC(G7):DG(F1) chainA ( 47) ARG443 7 13 13 0 0 0 0 ( 49) ASP445 9 1 1 0 0 0 0 ( 50) GLU446 0 0 4 1 0 0 0 ( 53) ARG449 0 0 5 12 8 0 0 ( 75) ARG471 0 0 0 2 11 13 0 ( 76) SER472 0 0 1 0 0 0 0 ( 77) ASP473 0 0 4 6 2 0 0 ( 78) HIS474 0 0 0 0 0 6 4 prot.sequence tathtcdyagcgktytksshlkahlrthtgekpyhcdwdgcgwkfaRsDEltRhyrkhtghrpfqcqkcdrafsRSDHlalhmkrhf >2wbu_A:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF THE ZINC FINGER DOMAIN OF KLF4 BOUND TO ITS TARGET DNA organism=MUS MUSCULUS DNA sequence DG(B1):DC(C10) DA(B2):DT(C9) DG(B3):DC(C8) DG(B4):DC(C7) DC(B5):DG(C6) DG(B6):DC(C5) DT(B7):DA(C4) DG(B8):DC(C3) DG(B9):DC(C2) DC(B10):DG(C1) chainA ( 15) LYS413 0 0 0 0 0 0 0 8 5 4 ( 17) SER415 0 0 0 0 0 0 0 0 0 5 ( 18) HIS416 0 0 0 0 0 0 23 12 0 0 ( 45) ARG443 0 0 0 0 22 12 7 0 0 0 ( 46) SER444 0 0 0 0 0 0 0 2 0 0 ( 47) ASP445 0 0 0 0 2 2 12 0 0 0 ( 48) GLU446 0 0 0 1 0 0 0 0 0 0 ( 51) ARG449 0 0 8 10 5 0 0 0 0 0 ( 73) ARG471 0 6 11 4 0 0 0 0 0 0 ( 75) ASP473 0 0 1 6 5 0 0 0 0 0 ( 76) HIS474 10 6 0 0 0 0 0 0 0 0 prot.sequence thtcdyagcgktytKsSHlkahlrthtgekpyhcdwdgcgwkfaRSDEltRhyrkhtghrpfqcqkcdrafsRsDHlalhmkrhf >2wcc_3:DNA-binding_domain; title=PHAGE LAMBDA INTDBD1-64 COMPLEX WITH P PRIME 2 DNA organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DG(11):DC(224) DC(12):DG(223) DA(13):DT(222) DG(14):DC(221) DT(15):DA(220) DC(16):DG(219) DA(17):DT(218) DA(18):DT(217) DA(19):DT(216) DA(110):DT(215) DT(111):DA(214) DC(112):DG(213) chain3 ( 1) MET1 0 0 0 0 0 0 0 0 1 8 7 0 ( 3) ARG3 0 0 0 0 0 0 1 9 2 0 0 0 ( 17) TYR17 0 0 0 0 0 0 4 15 0 0 0 0 ( 19) ARG19 0 0 0 0 12 20 7 0 0 0 0 0 ( 20) ASN20 0 0 0 0 1 3 0 0 0 0 0 0 ( 21) ASN21 0 0 5 4 0 0 0 0 0 0 0 0 ( 23) TYR23 0 0 2 0 0 0 0 0 0 0 0 0 ( 25) CYS25 0 0 0 0 2 0 0 0 0 0 0 0 ( 27) ARG27 0 0 0 0 0 0 0 3 3 0 0 0 ( 33) LYS33 0 0 0 0 0 2 0 0 0 0 0 0 ( 34) GLU34 0 0 0 0 2 8 1 0 0 0 0 0 prot.sequence MgRrrsherrdlppnlYiRNNgYyCyRdprtgKEfglgrdrriaiteaiqanielfsghkhkpl >2wq6_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=STRUCTURE OF THE 6-4 PHOTOLYASE OF D. MELANOGASTER IN COMPLEX WITH THE NON-NATURAL N4-METHYL T(DEWAR)C LESION organism=DROSOPHILA MELANOGASTER DNA sequence DA(D2):DT(C15) DC(D3):DG(C14) DC(D4):DG(C13) DT(D5):DA(C12) DG(D6):DC(C11) DC(D7):DG(C10) DG(D8):CDW(C9) DA(D9):TDY(C8) DC(D10):DG(C7) DC(D11):DG(C6) DG(D12):DC(C5) DC(D13):DG(C4) DT(D14):DA(C3) DG(D15):DC(C2) chainA (245) LYS246 0 0 0 0 0 0 3 7 0 0 0 0 0 0 (246) PRO247 0 0 0 0 0 0 5 1 0 0 0 0 0 0 (292) PRO293 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (293) VAL294 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (298) GLN299 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (301) TRP302 0 0 0 0 0 0 0 22 0 0 0 0 0 0 (364) HIS365 0 0 0 0 0 0 8 14 0 0 0 0 0 0 (365) LEU366 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (368) HIS369 0 0 0 0 0 0 8 3 0 0 0 0 0 0 (405) ASN406 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (408) TRP409 0 0 0 0 0 0 2 9 0 0 0 0 0 0 (416) HIS417 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (417) GLN418 0 0 0 0 0 0 0 0 31 0 0 0 0 0 (419) PHE420 0 0 0 0 0 0 0 0 11 0 0 0 0 0 (420) ARG421 0 0 0 0 0 34 0 0 0 0 0 0 0 0 (422) TYR423 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence dsqrstlvhwfrkglrlhdnpalshiftaanaapgryfvrpifildpgildwmqvganrwrflqqtledldnqlrklnsrlfvvrgkpaevfprifkswrvemltfetdiepysvtrdaavqklakaegvrvethcshtiynpelviaknlgkapityqkflgiveqlkvpkvlgvpeklknmptppkdeveqkdsaaydcptmkqlvkrpeelgpnkfpggetealrrmeeslkdeiwvarfekpntapnslepsttvlspylkfgclsarlfnqklkeiikrqpkhsqppvsligqlmwrefyytvaaaepnfdrmlgnvycmqipwqehpdhleawthgrtgypfidaimrqlrqegwihhlarhavacfltrgdlwisweegqrvfeqllldqdwalnagnwmwlsasaffHQyFRvyspvafgkktdpqghyirkyvpelskypagciyepwkaslvdqraygcvlgtdyphrivkhevvhkenikrmgaaykvnrevrtgke >2wq7_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=STRUCTURE OF THE 6-4 PHOTOLYASE OF D. MELANOGASTER IN COMPLEX WITH THE NON-NATURAL N4-METHYL T(6-4)C LESION organism=DROSOPHILA MELANOGASTER DNA sequence DC(C2):DG(D15) DA(C3):DT(D14) DG(C4):DC(D13) DC(C5):DG(D12) DG(C6):DC(D11) DG(C7):DC(D10) TDY(C8):DA(D9) Z(a9):DG(D8) DG(C10):DC(D7) DC(C11):DG(D6) DA(C12):DT(D5) DG(C13):DC(D4) DG(C14):DC(D3) DT(C15):DA(D2) chainA (245) LYS246 0 0 0 0 0 0 10 4 0 0 0 0 0 0 (246) PRO247 0 0 0 0 0 0 2 6 0 0 0 0 0 0 (293) VAL294 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (298) GLN299 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (301) TRP302 0 0 0 0 0 0 22 0 0 0 0 0 0 0 (364) HIS365 0 0 0 0 0 0 16 8 0 0 0 0 0 0 (365) LEU366 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (368) HIS369 0 0 0 0 0 0 4 10 0 0 0 0 0 0 (405) ASN406 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (408) TRP409 0 0 0 0 0 0 10 3 0 0 0 0 0 0 (416) HIS417 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (417) GLN418 0 0 0 0 0 62 0 0 0 0 0 0 0 0 (419) PHE420 0 0 0 0 0 20 0 0 0 0 0 0 0 0 (420) ARG421 0 0 0 0 0 0 0 0 17 0 0 0 0 0 (422) TYR423 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence dsqrstlvhwfrkglrlhdnpalshiftaanaapgryfvrpifildpgildwmqvganrwrflqqtledldnqlrklnsrlfvvrgkpaevfprifkswrvemltfetdiepysvtrdaavqklakaegvrvethcshtiynpelviaknlgkapityqkflgiveqlkvpkvlgvpeklknmptppkdeveqkdsaaydcptmkqlvkrpeelgpnkfpggetealrrmeeslkdeiwvarfekpntapnslepsttvlspylkfgclsarlfnqklkeiikrqpkhsqppvsligqlmwrefyytvaaaepnfdrmlgnvycmqipwqehpdhleawthgrtgypfidaimrqlrqegwihhlarhavacfltrgdlwisweegqrvfeqllldqdwalnagnwmwlsasaffHQyFRvyspvafgkktdpqghyirkyvpelskypagciyepwkaslvdqraygcvlgtdyphrivkhevvhkenikrmgaaykvnrevrtgke >2wt7_A:A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=CRYSTAL STRUCTURE OF THE BZIP HETERODIMERIC COMPLEX MAFB:CFOS BOUND TO DNA organism=MUS MUSCULUS DNA sequence DA(C1):DT(D16) DA(C2):DT(D15) DT(C3):DA(D14) DT(C4):DA(D13) DG(C5):DC(D12) DC(C6):DG(D11) DT(C7):DA(D10) DG(C8):DC(D9) DA(C9):DT(D8) DC(C10):DG(D7) DT(C11):DA(D6) DC(C12):DG(D5) DA(C13):DT(D4) DT(C14):DA(D3) DA(C15):DT(D2) DG(C16):DC(D1) chainA ( 6) ARG143 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 10) ASN147 0 0 0 0 0 0 0 0 0 0 5 7 8 3 0 0 ( 13) ALA150 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 14) ALA151 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 17) CYS154 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 18) ARG155 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 prot.sequence ekrriRrerNkmAAakCRnrrreltdtlqaetdqledeksalqteianllkekeklefilaah >2wt7_AB:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF THE BZIP HETERODIMERIC COMPLEX MAFB:CFOS BOUND TO DNA organism=MUS MUSCULUS DNA sequence DC(D1):DG(C16) DT(D2):DA(C15) DA(D3):DT(C14) DT(D4):DA(C13) DG(D5):DC(C12) DA(D6):DT(C11) DG(D7):DC(C10) DT(D8):DA(C9) DC(D9):DG(C8) DA(D10):DT(C7) DG(D11):DC(C6) DC(D12):DG(C5) DA(D13):DT(C4) DA(D14):DT(C3) DT(D15):DA(C2) DT(D16):DA(C1) chainA ( 6) ARG143 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 10) ASN147 0 0 3 8 7 5 0 0 0 0 0 0 0 0 0 0 ( 13) ALA150 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ALA151 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 17) CYS154 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG155 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 chainB ( 31) ARG244 0 0 0 0 0 0 0 0 0 0 6 12 14 0 0 0 ( 35) ASN248 0 0 0 0 0 0 0 0 3 2 4 0 0 0 0 0 ( 38) TYR251 0 0 0 0 0 0 0 0 0 1 9 8 0 0 0 0 ( 39) ALA252 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 ( 42) CYS255 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 43) ARG256 0 0 0 0 0 16 12 5 0 0 0 0 0 0 0 0 prot.sequence ekrriRrerNkmAAakCRnrrreltdtlqaetdqledeksalqteianllkekeklefilaah/dqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvkseklan >2wt7_B:A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=CRYSTAL STRUCTURE OF THE BZIP HETERODIMERIC COMPLEX MAFB:CFOS BOUND TO DNA organism=MUS MUSCULUS DNA sequence DC(D1):DG(C16) DT(D2):DA(C15) DA(D3):DT(C14) DT(D4):DA(C13) DG(D5):DC(C12) DA(D6):DT(C11) DG(D7):DC(C10) DT(D8):DA(C9) DC(D9):DG(C8) DA(D10):DT(C7) DG(D11):DC(C6) DC(D12):DG(C5) DA(D13):DT(C4) DA(D14):DT(C3) DT(D15):DA(C2) DT(D16):DA(C1) chainB ( 31) ARG244 0 0 0 0 0 0 0 0 0 0 6 12 14 0 0 0 ( 35) ASN248 0 0 0 0 0 0 0 0 3 2 4 0 0 0 0 0 ( 38) TYR251 0 0 0 0 0 0 0 0 0 1 9 8 0 0 0 0 ( 39) ALA252 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 ( 42) CYS255 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 43) ARG256 0 0 0 0 0 16 12 5 0 0 0 0 0 0 0 0 prot.sequence dqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvkseklan >2wtf_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE ETA IN COMPLEX WITH THE CIS-DIAMMINEPLATINUM (II) 1,3- GTG INTRASTRAND CROSS-LINK organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(P1):DC(O10) DT(P2):DA(O9) DG(P3):DC(O8) DG(P4):DC(O7) DT(P5):DA(O6) DG(P6):DC(O5) DA(P7):DT(O4) DG(P8):DC(O3) DC(P9):DG(O2) chainA ( 55) GLN55 0 0 0 0 0 0 0 0 1 prot.sequence mskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvQwnsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpakqisvedhkvslepyrresrkalkifksacdlverasidevfldlgricfnmlmfdneyeltgdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvilalgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdydrstsnidplktadlaeklfklsrgryglplssrpvvksmmsnknlrgkscnsivdciswlevfcaeltsriqdleqeynkiviprtvsislktksyevyrksgpvaykginfqshellkvgikfvtdldikgknksyypltklsmtitnfdii >2wtu_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF ESCHERICHIA COLI MUTS IN COMPLEX WITH A 16 BASEPAIR OLIGO CONTAINING AN A.A MISMATCH. organism=Escherichia coli DNA sequence DC(F15):DG(E16) DT(F16):DA(E15) DG(F17):DC(E14) DG(F18):DC(E13) DT(F19):DA(E12) DG(F20):DC(E11) DC(F21):DG(E10) DA(F22):DA(E9) DT(F23):DA(E8) DG(F24):DC(E7) DG(F25):DC(E6) DC(F26):DG(E5) DA(F27):DT(E4) DG(F28):DC(E3) DC(F29):DG(E2) DT(F30):DA(E1) chainA ( 32) MET33 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 52 16 0 0 0 0 0 0 0 ( 37) GLU38 0 0 0 0 0 0 1 14 0 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 chainB prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgdFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgaadfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/fyelfyddakrasqlldispmagipyhavenYlaKlVnqgesvaicevvrivtpgtIsdeallqerQdnlLaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgaaddlasgrstfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >2wty_A:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF THE HOMODIMERIC MAFB IN COMPLEX WITH THE T-MARE BINDING SITE organism=MUS MUSCULUS DNA sequence DA(D1):DT(C19) DT(D2):DA(C18) DT(D3):DA(C17) DT(D4):DA(C16) DG(D5):DC(C15) DC(D6):DG(C14) DT(D7):DA(C13) DG(D8):DC(C12) DA(D9):DT(C11) DG(D10):DC(C10) DT(D11):DA(C9) DC(D12):DG(C8) DA(D13):DT(C7) DG(D14):DC(C6) DC(D15):DG(C5) DA(D16):DT(C4) DA(D17):DT(C3) DT(D18):DA(C2) DT(D19):DA(C1) chainA ( 33) ARG244 0 0 0 15 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ASN248 0 0 0 0 0 4 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR251 0 0 0 0 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ALA252 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 44) CYS255 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG256 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 prot.sequence sddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvkseklansg >2wty_AB:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF THE HOMODIMERIC MAFB IN COMPLEX WITH THE T-MARE BINDING SITE organism=MUS MUSCULUS DNA sequence DA(D1):DT(C19) DT(D2):DA(C18) DT(D3):DA(C17) DT(D4):DA(C16) DG(D5):DC(C15) DC(D6):DG(C14) DT(D7):DA(C13) DG(D8):DC(C12) DA(D9):DT(C11) DG(D10):DC(C10) DT(D11):DA(C9) DC(D12):DG(C8) DA(D13):DT(C7) DG(D14):DC(C6) DC(D15):DG(C5) DA(D16):DT(C4) DA(D17):DT(C3) DT(D18):DA(C2) DT(D19):DA(C1) chainA ( 33) ARG244 0 0 0 15 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ASN248 0 0 0 0 0 4 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR251 0 0 0 0 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ALA252 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 44) CYS255 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG256 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 chainB ( 35) ARG244 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 10 0 0 0 ( 39) ASN248 0 0 0 0 0 0 0 0 0 0 0 1 2 3 0 0 0 0 0 ( 42) TYR251 0 0 0 0 0 0 0 0 0 0 0 0 1 4 7 0 0 0 0 ( 43) ALA252 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 46) CYS255 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 47) ARG256 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 prot.sequence sddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvkseklansg/mfsddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvkseklansgr >2wwy_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF HUMAN RECQ-LIKE HELICASE IN COMPLEX WITH A DNA SUBSTRATE organism=HOMO SAPIENS DNA sequence DG(t1):DC(r15) DA(t2):DT(r14) DT(t3):DA(r13) DC(t4):DG(r12) DT(t5):DA(r11) DC(t6):DG(r10) DG(t7):DC(r9) DA(t8):DT(r8) DC(t9):DG(r7) DG(t10):DC(r6) DC(t11):DG(r5) DT(t12):DA(r4) DC(t13):DT(r3) DT(t14):DG(r2) DC(t15):DG(r1) chainB (309) VAL372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (330) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (366) MET429 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 (370) GLU433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (499) THR562 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (500) ALA563 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (501) TYR564 0 0 0 0 0 0 0 0 0 0 0 0 13 14 0 (502) ALA565 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 (503) THR566 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence spaawnkedfpwsgkvkdilqnvfklekfrplqletinvtmagkevflvmptgggkslcyqlpalcsdgftlvicplislmedqlmvlkqlgisatmlnassskehvkwvhaemvnknselkliyvtpekiakskmfmsrlekayearrftriavdevhccsqwghdfrpdykalgilkrqfpnasligltatatnhvltdaqkilciekcftftasfnrpnlyyevrqkpsntedfiedivklingrykgqsgiiycfsqkdseqvtvslqnlgihagayhanlepedkttvhrkwsaneiqvvvatVafgmgidkpdvrfvihhsmsKsmenyyqesgragrddmkadcilyygfgdifrissMvvmEnvgqqklyemvsycqniskcrrvlmaqhfdevwnseacnkmcdncckdsaferkniteycrdlikilkqaeelnekltplklidswmgkgaaklrvagvvaptlpredlekiiahfliqqylkedysfTAYATisylkigpkanllnneahaitmqvtks >2x6v_A:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN TBX5 IN THE DNA-BOUND AND DNA-FREE FORM organism=HOMO SAPIENS DNA sequence DA(D13):DT(C11) DA(D14):DT(C10) DG(D15):DC(C9) DG(D16):DC(C8) DT(D17):DA(C7) DG(D18):DC(C6) DT(D19):DA(C5) DG(D20):DC(C4) DA(D21):DT(C3) DG(D22):DC(C2) chainA ( 29) ARG81 0 0 0 0 2 5 0 0 0 0 (154) THR215 0 0 0 0 0 0 0 0 1 3 (155) SER216 0 0 0 0 0 0 0 0 0 1 (171) PHE232 0 3 2 3 0 0 0 0 0 0 (175) PHE236 0 0 0 0 4 9 0 0 0 0 prot.sequence gikvflherelwlkfhevgtemiitkagRrmfpsykvkvtglnpktkyillmdivpaddhrykfadnkwsvtgkaepampgrlyvhpdspatgahwmrqlvsfqklkltnnhldpfghiilnsmhkyqprlhivkadtafcthvfpetafiavTSyqnhkitqlkiennpFakgFrg >2xc9_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=BINARY COMPLEX OF SULFOLOBUS SOLFATARICUS DPO4 DNA POLYMERASE AND 1, N2-ETHENOGUANINE MODIFIED DNA, MAGNESIUM FORM organism=SULFOLOBUS SOLFATARICUS DNA sequence DC(T4):DG(P14) DG(T6):DC(P13) DA(T7):DT(P12) DA(T8):DT(P11) DT(T9):DA(P10) DC(T10):DG(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DC(T14):DG(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) chainA ( 42) ALA42 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) SER244 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (332) ARG332 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 0 6 2 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgAvatanyearkfgvkAgipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivSrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >2xca_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF SULFOLOBUS SOLFATARICUS DPO4 DNA POLYMERASE, 7,8- DIHYDRO-8-OXODEOXYGUANINE MODIFIED DNA AND DGTP - MAGNESIUM FORM organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) chainA (336) ARG336 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2xcp_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF SULFOLOBUS SOLFATARICUS DPO4 DNA POLYMERASE, 7,8- DIHYDRO-8-OXODEOXYGUANINE MODIFIED DNA AND DCTP - MAGNESIUM FORM organism=SULFOLOBUS SOLFATARICUS DNA sequence DA(F7):DT(E12) DA(F8):DT(E11) DT(F9):DA(E10) DC(F10):DG(E9) DC(F11):DG(E8) DT(F12):DA(E7) DT(F13):DA(E6) DC(F14):DG(E5) DC(F15):DG(E4) DC(F16):DG(E3) DC(F17):DG(E2) DC(F18):DG(E1) chainB (245) SER244 0 0 1 0 0 0 0 0 0 0 0 0 (337) ARG336 0 3 2 0 0 0 0 0 0 0 0 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >2xcr_BD:Type_II_DNA_topoisomerase; title=THE 3.5A CRYSTAL STRUCTURE OF THE CATALYTIC CORE (B'A' REGION) OF STAPHYLOCOCCUS AUREUS DNA GYRASE COMPLEXED WITH GSK299423 AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(E2):DC(F19) DC(E3):DG(F18) DC(E4):DG(F17) DG(E5):DC(F16) DT(E6):DA(F15) DA(E7):DT(F14) DG(E8):DC(F13) DG(E9):DC(F12) DG(E10):DC(F11) DC(E11):DG(F10) DC(E12):DG(F9) DC(E13):DG(F8) DT(E14):DA(F7) DA(E15):DT(F6) DC(E16):DG(F5) DG(E17):DC(F4) DG(E18):DC(F3) DC(E19):DG(F2) chainB ( 44) LYS460 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 (311) SER1084 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (312) SER1085 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (402) ILE1175 0 0 15 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 43) ARG458 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 45) LYS460 0 0 0 0 0 0 0 0 0 0 0 4 2 1 0 0 0 0 (313) SER1085 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (350) ARG1122 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (403) ILE1175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpplykltqgkqkyyvyndreldklkselnptpkwsiarykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyanldfaelpqsrinernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/gkladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpplykltqgkqkyyvyndreldklkselnptpkwsiarykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyanldfaelpqsrinernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg >2xcr_SU:Type_II_DNA_topoisomerase; title=THE 3.5A CRYSTAL STRUCTURE OF THE CATALYTIC CORE (B'A' REGION) OF STAPHYLOCOCCUS AUREUS DNA GYRASE COMPLEXED WITH GSK299423 AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DC(V3):DG(W18) DC(V4):DG(W17) DG(V5):DC(W16) DT(V6):DA(W15) DA(V7):DT(W14) DG(V8):DC(W13) DG(V9):DC(W12) DG(V10):DC(W11) DC(V11):DG(W10) DC(V12):DG(W9) DC(V13):DG(W8) DT(V14):DA(W7) DA(V15):DT(W6) DC(V16):DG(W5) DG(V17):DC(W4) DG(V18):DC(W3) DC(V19):DG(W2) chainS ( 45) LYS460 0 0 0 1 6 3 0 0 0 0 0 0 0 0 0 0 0 (253) TYR1025 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) ARG1033 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) SER1085 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (316) GLU1088 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (403) ILE1175 0 7 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (312) SER1085 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (349) ARG1122 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (402) ILE1175 0 0 0 0 0 0 0 0 0 0 0 0 0 27 12 0 0 prot.sequence gkladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpplykltqgkqkyyvyndreldklkselnptpkwsiarykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyanldfaelpqsrinernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpplykltqgkqkyyvyndreldklkselnptpkwsiarykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyanldfaelpqsrinernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >2xcr_U:Type_II_DNA_topoisomerase; title=THE 3.5A CRYSTAL STRUCTURE OF THE CATALYTIC CORE (B'A' REGION) OF STAPHYLOCOCCUS AUREUS DNA GYRASE COMPLEXED WITH GSK299423 AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(W2):DC(V19) DC(W3):DG(V18) DC(W4):DG(V17) DG(W5):DC(V16) DT(W6):DA(V15) DA(W7):DT(V14) DG(W8):DC(V13) DG(W9):DC(V12) DG(W10):DC(V11) DC(W11):DG(V10) DC(W12):DG(V9) DC(W13):DG(V8) DT(W14):DA(V7) DA(W15):DT(V6) DC(W16):DG(V5) DG(W17):DC(V4) DG(W18):DC(V3) chainU ( 44) LYS460 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (312) SER1085 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (349) ARG1122 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (402) ILE1175 0 0 12 27 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpplykltqgkqkyyvyndreldklkselnptpkwsiarykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyanldfaelpqsrinernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >2xcs_B:Type_II_DNA_topoisomerase; title=THE 2.1A CRYSTAL STRUCTURE OF S. AUREUS GYRASE COMPLEX WITH GSK299423 AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(F2):DC(E19) DC(F3):DG(E18) DC(F4):DG(E17) DG(F5):DC(E16) DT(F6):DA(E15) DA(F7):DT(E14) DG(F8):DC(E13) DG(F9):DC(E12) DG(F10):DC(E11) DC(F11):DG(E10) DC(F12):DG(E9) DC(F13):DG(E8) DT(F14):DA(E7) DA(F15):DT(E6) DC(F16):DG(E5) DG(F17):DC(E4) DG(F18):DC(E3) DC(F19):DG(E2) chainB ( 42) ARG458 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 (266) SER1085 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (269) GLU1088 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (356) ILE1175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 24 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyanernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangaSgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg >2xcs_BD:Type_II_DNA_topoisomerase; title=THE 2.1A CRYSTAL STRUCTURE OF S. AUREUS GYRASE COMPLEX WITH GSK299423 AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(F2):DC(E19) DC(F3):DG(E18) DC(F4):DG(E17) DG(F5):DC(E16) DT(F6):DA(E15) DA(F7):DT(E14) DG(F8):DC(E13) DG(F9):DC(E12) DG(F10):DC(E11) DC(F11):DG(E10) DC(F12):DG(E9) DC(F13):DG(E8) DT(F14):DA(E7) DA(F15):DT(E6) DC(F16):DG(E5) DG(F17):DC(E4) DG(F18):DC(E3) DC(F19):DG(E2) chainB ( 42) ARG458 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 (266) SER1085 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (269) GLU1088 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (356) ILE1175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 24 0 0 chainD ( 44) LYS460 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 (265) SER1085 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (355) ILE1175 0 0 22 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyanernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangaSgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >2xct_B:Type_II_DNA_topoisomerase; title=THE TWINNED 3.35A STRUCTURE OF S. AUREUS GYRASE COMPLEX WITH CIPROFLOXACIN AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(E2):DC(H19) DT(E3):DA(H18) DG(E4):DC(H17) DC(E5):DG(H16) DG(E6):DC(H15) DG(E7):DC(H14) DT(E8):DA(H13) chainB ( 44) LYS460 0 0 0 0 1 7 2 (263) SER1085 0 0 0 0 0 2 1 (353) ILE1175 0 0 27 16 0 0 0 (358) ALA1180 0 0 1 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednanernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmAtnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg >2xe0_A:Homing_endonucleases; title=MOLECULAR BASIS OF ENGINEERED MEGANUCLEASE TARGETING OF THE ENDOGENOUS HUMAN RAG1 LOCUS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(D601):DA(C524) DC(D602):DG(C523) DT(D603):DA(C522) DG(D604):DC(C521) DG(D605):DC(C520) DC(D606):DG(C519) DT(D607):DA(C518) DG(D608):DC(C517) DA(D609):DT(C516) DG(D610):DC(C515) DG(D611):DC(C514) DT(D612):DA(C513) DA(D613):DT(C512) DC(D614):DG(C511) DC(D615):DG(C510) DT(D616):DA(C509) DG(D617):DC(C508) DA(D618):DT(C507) DG(D619):DC(C506) DA(D620):DT(C505) DA(D621):DT(C504) DC(D622):DG(C503) DA(D623):DT(C502) DA(D624):DT(C501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ASN28 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG38 0 0 23 29 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG40 0 0 0 19 21 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR44 0 0 0 0 0 0 2 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 17 17 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLN75 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiNpNaSskfkhRlRltfYvTqktqrrwfldklvdeigvgyvRdsgsVsQyvlseiaplhnfltqlqpflklkqkqanlvlkiieqlpsakaspaaflevctwvdqiaalndsaTrkttsetvaavld >2xe0_AB:Homing_endonucleases; title=MOLECULAR BASIS OF ENGINEERED MEGANUCLEASE TARGETING OF THE ENDOGENOUS HUMAN RAG1 LOCUS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(D601):DA(C524) DC(D602):DG(C523) DT(D603):DA(C522) DG(D604):DC(C521) DG(D605):DC(C520) DC(D606):DG(C519) DT(D607):DA(C518) DG(D608):DC(C517) DA(D609):DT(C516) DG(D610):DC(C515) DG(D611):DC(C514) DT(D612):DA(C513) DA(D613):DT(C512) DC(D614):DG(C511) DC(D615):DG(C510) DT(D616):DA(C509) DG(D617):DC(C508) DA(D618):DT(C507) DG(D619):DC(C506) DA(D620):DT(C505) DA(D621):DT(C504) DC(D622):DG(C503) DA(D623):DT(C502) DA(D624):DT(C501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ASN28 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG38 0 0 23 29 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG40 0 0 0 19 21 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR44 0 0 0 0 0 0 2 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 17 17 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLN75 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 ( 29) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 16 19 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 ( 32) ASN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 1 0 ( 39) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 43) ALA44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 74) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 76) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 3 0 0 0 0 0 0 ( 78) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiNpNaSskfkhRlRltfYvTqktqrrwfldklvdeigvgyvRdsgsVsQyvlseiaplhnfltqlqpflklkqkqanlvlkiieqlpsakaspaaflevctwvdqiaalndsaTrkttsetvaavld/ntkynkefllylagfvdgdgSiIaQiKpRaSNkfahQlSltfAvTqktqrrwfldklvdeigvgyvYdSgsVsDyRlSeikplhnfltqlqpflklkqkqanlvlaiieqlpsakaspdaflevctwvdqiaalndsKTrattsatvraald >2xe0_B:Homing_endonucleases; title=MOLECULAR BASIS OF ENGINEERED MEGANUCLEASE TARGETING OF THE ENDOGENOUS HUMAN RAG1 LOCUS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(C501):DA(D624) DT(C502):DA(D623) DG(C503):DC(D622) DT(C504):DA(D621) DT(C505):DA(D620) DC(C506):DG(D619) DT(C507):DA(D618) DC(C508):DG(D617) DA(C509):DT(D616) DG(C510):DC(D615) DG(C511):DC(D614) DT(C512):DA(D613) DA(C513):DT(D612) DC(C514):DG(D611) DC(C515):DG(D610) DT(C516):DA(D609) DC(C517):DG(D608) DA(C518):DT(D607) DG(C519):DC(D606) DC(C520):DG(D605) DC(C521):DG(D604) DA(C522):DT(D603) DG(C523):DC(D602) DA(C524):DT(D601) chainB ( 21) SER22 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG30 0 19 16 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN33 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER40 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ALA44 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP75 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG77 0 0 0 0 0 0 3 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) SER79 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpRaSNkfahQlSltfAvTqktqrrwfldklvdeigvgyvYdSgsVsDyRlSeikplhnfltqlqpflklkqkqanlvlaiieqlpsakaspdaflevctwvdqiaalndsKTrattsatvraald >2xgp_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=YEAST DNA POLYMERASE ETA IN COMPLEX WITH C8-2-ACETYLAMINOFLUORENE CONTAINING DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(U6):DG(Q13) DT(U7):DA(Q12) DC(U8):DG(Q11) DA(U9):DT(Q10) DT(U10):DA(Q9) DC(U11):DG(Q8) DC(U12):DG(Q7) DA(U13):DT(Q6) DC(U14):DG(Q5) chainB ( 75) ARG73 4 0 0 0 0 0 0 0 0 (396) SER394 0 0 0 0 1 0 0 0 0 prot.sequence grmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvqwnsiiavsyaarkygisRmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpakqisvedhkvslepyrresrkalkifksacdlverasidevfldlgricfnmlmfdneyeltgdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvilalgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdydrstsnidplktadlaeklfklsrgryglplssrpvvkSmmsnknlrgkscnsivdciswlevfcaeltsriqdleqeynkiviprtvsislktksyevyrksgpvaykginfqshellkvgikfvtdldikgknksyypltklsmtitnfdii >2xgq_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF YEAST DNA POLYMERASE ETA IN COMPLEX WITH C8-N-ACETYL-2- AMINOANTHRACENE CONTAINING DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(P5):DC(T14) DT(P6):DA(T13) DG(P7):DC(T12) DG(P8):DC(T11) DA(P9):DT(T10) DT(P10):DA(T9) DG(P11):DC(T8) DA(P12):DT(T7) DG(P13):DC(T6) chainA ( 56) GLN55 0 0 0 0 0 0 0 0 3 (395) SER394 0 0 0 0 1 0 0 0 0 prot.sequence rmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvQwnsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpakqisvedhkvslepyrresrkalkifksacdlverasidevfldlgricfnmlmfdneyeltgdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvilalgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdydrstsnidplktadlaeklfklsrgryglplssrpvvkSmmsnknlrgkscnsivdciswlevfcaeltsriqdleqeynkiviprtvsislktksyevyrksgpvaykginfqshellkvgikfvtdldikgknksyypltklsmtitnfdii >2xhb_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF DNA POLYMERASE FROM THERMOCOCCUS GORGONARIUS IN COMPLEX WITH HYPOXANTHINE-CONTAINING DNA organism=THERMOCOCCUS GORGONARIUS DNA sequence DG(D6):DC(D25) DA(D7):DT(D24) DC(D8):DG(D23) DA(D9):DT(D22) DC(D10):DG(D21) DG(D11):DC(D20) chainA (241) ASP246 1 0 0 0 0 0 (256) TYR261 1 0 0 0 0 0 (260) ARG265 7 0 0 0 0 0 (596) ARG612 0 5 5 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkidydrnfepyiyallkddsaiedvkkitaerhgttvrvvraekvkkkflgrpievwklyfthpqdvpairdkikehpavvdiyeydipfakrylidkglipmegdeelkmlafdietlefaegpilmisyadeegarvitwknidlpyvdvvstekemikrflkvvkekdpdvlityngdnfafaylkkrseklgvkfilgregsepkiqrmgDrfavevkgrihfdlYpviRrtinlptytleavyeaifgqpkekvyaeeiaqawetgeglervarysmedakvtyelgkeffpmeaqlsrlvgqslwdvsrsstgnlvewfllrkayernelapnkpdaggyvkeperglwenivyldfrslypsiiithnvspdtlnregceeydvapqvghkfckdfpgfipsllgdlleerqkvkkkmkatidpiekklldyrqraikilansfygyygyakarwyckecaesvtawgrqyiettireieekfgfkvlyadtdgffatipgadaetvkkkakefldyinaklpglleleyegfykrgffvtkkkyavideedkittrgleivRrdwseiaketqarvleailkhgdveeavrivkevteklskyevppeklviyeqitrdlkdykatgphvavakrlaargikirpgtvisyivlkgsgrigdraipfdefdpakhkydaeyyienqvlpaverilrafgyrkedlry >2xhi_A:DNA-glycosylase;TATA-box_binding_protein-like; title=SEPARATION-OF-FUNCTION MUTANTS UNRAVEL THE DUAL REACTION MODE OF HUMAN 8-OXOGUANINE DNA GLYCOSYLASE organism=HOMO SAPIENS DNA sequence DG(B2):DC(C29) DT(B3):DA(C28) DA(B4):DT(C27) DG(B5):DC(C26) DA(B6):DT(C25) DC(B7):DG(C24) DC(B8):8OG(C23) DT(B9):DA(C22) DG(B10):DC(C21) DG(B11):DC(C20) DA(B12):DT(C19) DC(B13):DG(C18) DG(B14):DC(C17) DC(B15):DG(C16) chainA ( 36) PHE45 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (135) PHE144 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (138) SER147 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (140) ASN149 0 0 0 0 0 68 5 5 0 0 0 0 0 0 (141) ASN150 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (142) ASN151 0 0 0 0 0 0 0 5 1 0 0 0 0 0 (143) ILE152 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (145) ARG154 0 0 0 0 0 0 10 10 0 0 0 0 0 0 (146) ILE155 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (194) TYR203 0 0 0 0 0 16 14 0 0 0 0 0 0 0 (195) ARG204 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (244) LYS253 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (248) MET257 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (257) PRO266 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (259) ASN268 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (262) MET271 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (306) GLN315 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (310) PHE319 0 0 0 0 0 0 44 0 0 0 0 0 0 0 prot.sequence rmghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrgdksqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficssNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtcvadkiclmaldkpqavpvnvhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwgpyagwaqavlfsadlrq >2xkk_AC:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF MOXIFLOXACIN, DNA, AND A. BAUMANNII TOPO IV (PARE-PARC FUSION TRUNCATE) organism=ACINETOBACTER BAUMANNII DNA sequence DT(F5):DA(E30) DT(F6):DA(E29) DT(F7):DA(E28) DA(F8):DT(E27) DC(F9):DG(E26) DG(F10):DC(E25) DT(F11):DA(E24) DG(F12):DC(E23) DC(F13):DG(E22) DA(F14):DT(E21) DT(F15):DA(E20) DA(F16):DT(E19) DG(F17):DC(E18) DT(F18):DA(E17) DC(F19):DG(E16) DA(F20):DT(E15) DT(F21):DA(E14) DT(F22):DA(E13) DC(F23):DG(E12) DA(F24):DT(E11) DT(F25):DA(E10) DG(F26):DC(E9) DA(F27):DT(E8) DC(F28):DG(E7) DC(F29):DG(E6) chainA ( 42) LYS420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 (202) LYS583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 (381) ILE1176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 19 0 0 0 0 0 (535) ARG1330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 chainC ( 57) LYS420 0 0 0 0 0 0 0 0 1 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG1033 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) ALA1085 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) ILE1176 0 0 0 0 0 0 20 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (553) ARG1330 0 0 0 0 5 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alpgkltreeselfivegdsaggsakqardknfqaimpirgKilntwevssdevlasqevhdiaiaigvdpgsddlselrygkiciladadsdglhiatllcalfvkhfpalveeghlyvampplfridigkdvhyalddeeletilknvknpqitrfkglgemnaiqlrettmdpntrrlvqldlddahltaglldkllaKkraadrkqwleqkenrsvaefteqaylnyamyvimdralphisdglkpvqrrivyamselglkssgkpkksartvgdvlgkyhphgdSacyeamvlmaqpfsyrypliegqgnwgspddpksfaamrteaklsayselllselgqgtsewqdnfdgslkepitlparvpnillngttgIavgmatdipphnlrevvkgtialirnpqtsdeklaeyipapdlptkaeiitppeellkiqttgrgsyrmravytiekneivitelpyqvsgskvitqiadqmqakklplvvdvrdesdhenptrlvivlrsnridaeavmshlfattdlessyRvnlnmigedgrpqvksirrillewieirkktvtrrlqyhlnriekrlhilaglliayldidtviriireedqpkpvlmehfnideiqaeailelklrhlakleemeirheqdelsakaaiireqlenpeslknliiselkedakkfgderrspiva/erkkivsgpalpgkladcvgqtreeselfivegdsaggsakqardknfqaimpirgKilntwevssdevlasqevhdiaiaigvdpgsddlselrygkiciladadsdglhiatllcalfvkhfpalveeghlyvampplfridigkdvhyalddeeletilknvknpqitrfkglgemnaiqlrettmdpntrrlvqldlddahltaglldkllakkraadrkqwleqkgatenrsvaefteqaylnyamyvimdRalphisdglkpvqrrivyamselglkssgkpkksartvgdvlgkyhphgdsAcyeamvlmaqpfsyrypliegqgnwgspddpksfaamrteaklsayselllselgqgtsewqdnfdgslkepitlparvpnillngttgIavgmatdipphnlrevvkgtialirnpqtsdeklaeyipapdlptkaeiitppeellkiqttgrgsyrmravytiekneivitelpyqvsgskvitqiadqmqakklplvvdvrdesdhenptrlvivlrsnridaeavmshlfattdlessyRvnlnmigedgrpqvksirrillewieirkktvtrrlqyhlnriekrlhilaglliayldidtviriireedqpkpvlmehfnideiqaeailelklrhlakleemeirheqdelsakaaiireqlenpeslknliiselkedakkfgderrspivar >2xkk_C:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF MOXIFLOXACIN, DNA, AND A. BAUMANNII TOPO IV (PARE-PARC FUSION TRUNCATE) organism=ACINETOBACTER BAUMANNII DNA sequence DG(E6):DC(F29) DG(E7):DC(F28) DT(E8):DA(F27) DC(E9):DG(F26) DA(E10):DT(F25) DT(E11):DA(F24) DG(E12):DC(F23) DA(E13):DT(F22) DA(E14):DT(F21) DT(E15):DA(F20) DG(E16):DC(F19) DA(E17):DT(F18) DC(E18):DG(F17) DT(E19):DA(F16) DA(E20):DT(F15) DT(E21):DA(F14) DG(E22):DC(F13) DC(E23):DG(F12) DA(E24):DT(F11) DC(E25):DG(F10) DG(E26):DC(F9) DT(E27):DA(F8) DA(E28):DT(F7) DA(E29):DT(F6) DA(E30):DT(F5) chainC ( 57) LYS420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 0 0 (257) ARG1033 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (309) ALA1085 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (399) ILE1176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 20 0 0 0 0 0 0 (553) ARG1330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 5 0 0 0 0 prot.sequence erkkivsgpalpgkladcvgqtreeselfivegdsaggsakqardknfqaimpirgKilntwevssdevlasqevhdiaiaigvdpgsddlselrygkiciladadsdglhiatllcalfvkhfpalveeghlyvampplfridigkdvhyalddeeletilknvknpqitrfkglgemnaiqlrettmdpntrrlvqldlddahltaglldkllakkraadrkqwleqkgatenrsvaefteqaylnyamyvimdRalphisdglkpvqrrivyamselglkssgkpkksartvgdvlgkyhphgdsAcyeamvlmaqpfsyrypliegqgnwgspddpksfaamrteaklsayselllselgqgtsewqdnfdgslkepitlparvpnillngttgIavgmatdipphnlrevvkgtialirnpqtsdeklaeyipapdlptkaeiitppeellkiqttgrgsyrmravytiekneivitelpyqvsgskvitqiadqmqakklplvvdvrdesdhenptrlvivlrsnridaeavmshlfattdlessyRvnlnmigedgrpqvksirrillewieirkktvtrrlqyhlnriekrlhilaglliayldidtviriireedqpkpvlmehfnideiqaeailelklrhlakleemeirheqdelsakaaiireqlenpeslknliiselkedakkfgderrspivar >2xo7_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF A DA:O-ALLYLHYDROXYLAMINE-DC BASEPAIR IN COMPLEX WITH FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DG(B20):DC(C13) DA(B21):DT(C12) DC(B22):DG(C11) DC(B23):DG(C10) DA(B24):DT(C9) DT(B25):DA(C8) 47C(B26):DA(C7) DC(B27):DG(C6) DC(B28):DG(C5) DT(B29):DA(C4) chainA (286) LYS582 0 0 0 0 0 2 4 0 0 0 (291) TYR587 0 0 0 0 0 0 0 1 0 0 (319) ARG615 0 0 0 0 0 0 0 0 4 7 (326) ASN622 0 0 0 0 0 0 0 1 0 0 (329) ASN625 0 0 0 0 0 0 1 7 0 0 (418) TYR714 0 0 0 0 0 0 0 0 0 49 (501) GLN797 0 0 0 0 0 0 0 0 1 4 (533) HIS829 0 0 0 0 0 0 0 0 1 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkksktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2xro_ABEF:GAF_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF TTGV IN COMPLEX WITH ITS DNA OPERATOR organism=PSEUDOMONAS PUTIDA DNA sequence DG(Y1):DC(X42) DC(Y2):DG(X41) DT(Y3):DA(X40) DG(Y4):DC(X39) DA(Y5):DT(X38) DA(Y6):DT(X37) DT(Y7):DA(X36) DC(Y8):DG(X35) DG(Y9):DC(X34) DT(Y10):DA(X33) DA(Y11):DT(X32) DA(Y12):DT(X31) DT(Y13):DA(X30) DG(Y14):DC(X29) DC(Y15):DG(X28) DG(Y16):DC(X27) DG(Y17):DC(X26) DT(Y18):DA(X25) DA(Y19):DT(X24) DG(Y20):DC(X23) DA(Y21):DT(X22) DG(Y22):DC(X21) DT(Y23):DA(X20) DG(Y24):DC(X19) DT(Y25):DA(X18) DA(Y26):DT(X17) DG(Y27):DC(X16) DC(Y28):DG(X15) DA(Y29):DT(X14) DT(Y30):DA(X13) DT(Y31):DA(X12) DA(Y32):DT(X11) DT(Y33):DA(X10) DG(Y34):DC(X9) DT(Y35):DA(X8) DG(Y36):DC(X7) DA(Y37):DT(X6) DT(Y38):DA(X5) DA(Y39):DT(X4) DC(Y40):DG(X3) DT(Y41):DA(X2) DC(Y42):DG(X1) chainA ( 22) LEU36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) LEU36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 35) SER48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 ( 36) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 38) GLN51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 ( 39) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 chainE ( 22) LEU36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) LEU36 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER48 0 0 0 0 0 1 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR49 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN51 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG52 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qviaraasimralgshphglsLaaiaqlvglprSTvQRiinaleeeflvealgpaggfrlgpalgqlinqaqtdilslvkpylrslaeeldesvslaslagdkiyvldrivserelrvvfpiginvpaaataagkvllaalpdetlqaalgeqlpvltsntlgrkalvkqlsevrqsgvasdldehidgvssfatlldtylgyyslaivmpssraskqsdlikkallqsklnieraigr/iqviaraasimralgshphglsLaaiaqlvglprSTvQRiinaleeeflvealgpaggfrlgpalgqlinqaqtdilslvkpylrslaeeldesvslaslagdkiyvldrivserelrvvfpiginvpaaataagkvllaalpdetlqaalgeqlpvltsntlgrkalvkqlsevrqsgvasdldehidgvssfatlldtylgyyslaivmpssraskqsdlikkallqsklnieraigr/qviaraasimralgshphglsLaaiaqlvglpRSTvQRiinaleeeflvealgpaggfrlgpalgqlinqaqtdilslvkpylrslaeeldesvslaslagdkiyvldrivserelrvvfpiginvpaaataagkvllaalpdetlqaalgeqlpvltsntlgrkalvkqlsevrqsgvasdldehidgvssfatlldtylgyyslaivmpssraskqsdlikkallqsklnieraigr/iqviaraasimralgshphglsLaaiaqlvglprSTvQRiinaleeeflvealgpaggfrlgpalgqlinqaqtdilslvkpylrslaeeldesvslaslagdkiyvldrivserelrvvfpiginvpaaataagkvllaalpdetlqaalgeqlpvltsntlgrkalvkqlsevrqsgvasdldehidgvssfatlldtylgyyslaivmpssraskqsdlikkallqsklnieraigr >2xro_E:GAF_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF TTGV IN COMPLEX WITH ITS DNA OPERATOR organism=PSEUDOMONAS PUTIDA DNA sequence DG(Y1):DC(X42) DC(Y2):DG(X41) DT(Y3):DA(X40) DG(Y4):DC(X39) DA(Y5):DT(X38) DA(Y6):DT(X37) DT(Y7):DA(X36) DC(Y8):DG(X35) DG(Y9):DC(X34) DT(Y10):DA(X33) DA(Y11):DT(X32) DA(Y12):DT(X31) DT(Y13):DA(X30) DG(Y14):DC(X29) DC(Y15):DG(X28) DG(Y16):DC(X27) DG(Y17):DC(X26) DT(Y18):DA(X25) DA(Y19):DT(X24) DG(Y20):DC(X23) DA(Y21):DT(X22) DG(Y22):DC(X21) DT(Y23):DA(X20) DG(Y24):DC(X19) DT(Y25):DA(X18) DA(Y26):DT(X17) DG(Y27):DC(X16) DC(Y28):DG(X15) DA(Y29):DT(X14) DT(Y30):DA(X13) DT(Y31):DA(X12) DA(Y32):DT(X11) DT(Y33):DA(X10) DG(Y34):DC(X9) DT(Y35):DA(X8) DG(Y36):DC(X7) DA(Y37):DT(X6) DT(Y38):DA(X5) DA(Y39):DT(X4) DC(Y40):DG(X3) DT(Y41):DA(X2) DC(Y42):DG(X1) chainE ( 22) LEU36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qviaraasimralgshphglsLaaiaqlvglpRSTvQRiinaleeeflvealgpaggfrlgpalgqlinqaqtdilslvkpylrslaeeldesvslaslagdkiyvldrivserelrvvfpiginvpaaataagkvllaalpdetlqaalgeqlpvltsntlgrkalvkqlsevrqsgvasdldehidgvssfatlldtylgyyslaivmpssraskqsdlikkallqsklnieraigr >2xrz_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=X-RAY STRUCTURE OF ARCHAEAL CLASS II CPD PHOTOLYASE FROM METHANOSARCINA MAZEI IN COMPLEX WITH INTACT CPD-LESION organism=METHANOSARCINA MAZEI DNA sequence DT(F1):DA(E14) DG(F2):DC(E13) DC(F3):DG(E12) DG(F4):DC(E11) DC(F5):DG(E10) DG(F6):DC(E9) DA(F7):DC(E6) DA(F8):DG(E5) DG(F9):DG(E4) chainB (166) HIS161 0 0 0 0 0 0 0 2 0 (401) ARG429 0 0 0 0 0 0 32 2 9 (403) TRP431 0 0 0 0 0 17 9 0 0 (413) ARG441 0 0 0 0 0 2 0 0 0 (422) ARG450 2 6 8 11 0 0 0 0 0 prot.sequence lvprgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtkdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >2xsd_C:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=CRYSTAL STRUCTURE OF THE DIMERIC OCT-6 (POU3F1) POU DOMAIN BOUND TO PALINDROMIC MORE DNA organism=MUS MUSCULUS DNA sequence DC(B202):DG(A210) DC(B203):DG(A209) DT(B204):DA(A208) DC(B205):DG(A207) DA(B206):DT(A206) DT(B207):DA(A205) DG(B208):DC(A204) DC(B209):DG(A203) DA(B210):DT(A202) DT(B211):DA(A201) chainC ( 41) SER287 0 0 0 0 0 0 1 0 0 0 ( 42) GLN288 0 0 0 0 0 0 0 0 1 10 ( 43) THR289 0 0 0 0 0 0 3 6 9 0 ( 46) CYS292 0 0 0 0 0 0 0 0 2 2 ( 47) ARG293 0 0 0 0 0 6 15 4 0 0 ( 53) LEU299 0 0 0 0 0 1 0 0 0 0 ( 57) ASN303 0 0 0 0 0 1 0 0 0 0 (113) ARG382 0 4 2 0 0 0 0 0 0 0 (114) VAL383 0 0 0 0 2 2 0 0 0 0 (117) CYS386 0 0 2 0 0 0 0 0 0 0 (118) ASN387 0 0 0 0 0 13 10 0 0 0 (121) GLN390 0 0 0 12 10 5 0 0 0 0 prot.sequence apssddleqfakqfkqrriklgftqadvglalgtlygnvfSQTtiCRfealqLsfkNmcklkpllnkwleetdsievgvkgaleshflkcpkpsaheitgladslqlekevvRVwfCNrrQkekrmtp >2xy5_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF AN ARTIFICIAL SALEN-COPPER BASEPAIR IN COMPLEX WITH FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DG(B20):DC(C13) DA(B21):DT(C12) DC(B22):DG(C11) DC(B23):DG(C10) DT(B25):DA(C8) DC(B26):DG(C7) DC(B27):DG(C6) DC(B28):DG(C5) DT(B29):DA(C4) chainA (287) LYS582 0 0 0 0 1 5 0 0 0 (292) TYR587 0 0 0 0 0 0 1 0 0 (320) ARG615 0 0 0 0 0 0 0 4 6 (327) ASN622 0 0 0 0 0 0 1 0 0 (330) ASN625 0 0 0 0 0 3 7 1 0 (419) TYR714 0 0 0 0 0 0 0 0 51 (502) GLN797 0 0 0 0 0 0 0 1 2 (534) HIS829 0 0 0 0 0 0 0 1 0 prot.sequence aakmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkksktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2xy6_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF A SALICYLIC ALDEHYDE BASEPAIR IN COMPLEX WITH FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DG(B20):DC(C13) DA(B21):DT(C12) DC(B22):DG(C11) DC(B23):DG(C10) DT(B25):DA(C8) DC(B26):DG(C7) DC(B27):DG(C6) DC(B28):DG(C5) DT(B29):DA(C4) chainA (287) LYS582 0 0 0 0 0 6 0 0 0 (292) TYR587 0 0 0 0 0 0 1 0 0 (320) ARG615 0 0 0 0 0 0 0 4 6 (327) ASN622 0 0 0 0 0 0 1 0 0 (330) ASN625 0 0 0 0 0 3 7 1 0 (419) TYR714 0 0 0 0 0 0 0 0 47 (502) GLN797 0 0 0 0 0 0 0 1 2 (534) HIS829 0 0 0 0 0 0 0 2 0 prot.sequence takmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkksktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2xy7_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF A SALICYLIC ALDEHYDE BASE IN THE PRE-INSERTION SITE OF FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DC(C4):DG(B29) DG(C5):DC(B28) DA(C6):DT(B27) DG(C7):DC(B26) DT(C8):DA(B25) DC(C9):DG(B24) DA(C10):DT(B23) DG(C11):DC(B22) DG(C12):DC(B21) DC(C13):DG(B20) chainA (286) LYS582 0 0 0 4 4 0 0 0 0 0 (291) TYR587 0 0 1 0 0 0 0 0 0 0 (319) ARG615 9 4 0 0 0 0 0 0 0 0 (329) ASN625 0 1 4 2 0 0 0 0 0 0 (333) ARG629 6 8 0 0 0 0 0 0 0 0 (418) TYR714 37 0 0 0 0 0 0 0 0 0 (501) GLN797 3 1 0 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhaapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkksktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepnlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqarlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2xzf_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE WILD-TYPE LACTOCOCCUS LACTIS FPG (MUTM) AND AN OXIDIZED PYRIMIDINE CONTAINING DNA AT 293K organism=LACTOCOCCUS LACTIS SUBSP. CREMORIS DNA sequence DC(B1):DG(C27) DT(B2):DA(C26) DC(B3):DG(C25) DT(B4):DA(C24) DT(B5):DA(C23) DT(B6):DA(C22) VET(B7):DC(C21) DT(B8):DA(C20) DT(B9):DA(C19) DT(B10):DA(C18) DC(B11):DG(C17) DT(B12):DA(C16) DC(B13):DG(C15) chainA ( 1) PRO1 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 5) GLU5 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 74) ARG74 0 0 0 0 0 0 0 7 4 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 0 13 0 0 0 0 0 (109) ARG109 0 0 0 0 0 74 15 1 0 0 0 0 0 (111) PHE111 0 0 0 0 0 0 11 36 0 0 0 0 0 (172) ILE172 0 0 0 0 0 0 1 0 0 0 0 0 0 (255) ARG260 0 0 0 0 0 0 0 5 1 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >2xzu_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE WILD-TYPE LACTOCOCCUS LACTIS FPG (MUTM) AND AN OXIDIZED PYRIMIDINE CONTAINING DNA AT 310K organism=LACTOCOCCUS LACTIS DNA sequence DC(C16):DG(B14) DG(C17):DC(B13) DA(C18):DT(B12) DG(C19):DC(B11) DA(C20):DT(B10) DA(C21):DT(B9) DA(C22):DT(B8) DC(C23):VET(B7) DA(C24):DT(B6) DA(C25):DT(B5) DA(C26):DT(B4) DG(C27):DC(B3) DA(C28):DT(B2) chainA ( 1) PRO1 0 0 0 0 0 0 0 13 0 0 0 0 0 ( 5) GLU5 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 74) ARG74 0 0 0 0 0 3 14 0 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 26 0 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 2 15 37 0 0 0 0 (111) PHE111 0 0 0 0 0 0 78 11 0 0 0 0 0 (172) ILE172 0 0 0 0 0 0 0 1 0 0 0 0 0 (255) ARG260 0 0 0 0 0 1 10 0 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >2y1j_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF A R-DIASTEREOMER ANALOGUE OF THE SPORE PHOTOPRODUCT IN COMPLEX WITH FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DG(B20):DC(C13) DA(B21):DT(C12) DC(B22):DG(C11) DC(B23):DG(C10) DA(B24):DG(C7) DA(B25):DG(C6) DC(B26):DG(C5) DC(B27):DA(C4) chainA (286) LYS582 0 0 0 0 1 0 2 0 (291) TYR587 0 0 0 0 0 0 0 1 (319) ARG615 0 0 0 0 0 0 4 1 (326) ASN622 0 0 0 0 0 1 0 0 (329) ASN625 0 0 0 0 2 3 0 4 (418) TYR714 0 0 0 0 0 0 0 50 (501) GLN797 0 0 0 0 0 0 0 3 (533) HIS829 0 0 0 0 0 0 1 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpesaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnkgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >2y7h_ABC:S-adenosyl-L-methionine-dependent_methyltransferases; title=ATOMIC MODEL OF THE DNA-BOUND METHYLASE COMPLEX FROM THE TYPE I RESTRICTION-MODIFICATION ENZYME ECOKI (M2S1). BASED ON FITTING INTO EM MAP 1534. organism=ESCHERICHIA COLI DNA sequence DG(E1):DC(D20) DT(E2):DA(D19) DT(E3):DA(D18) DG(E4):DC(D17) DC(E5):DG(D16) DA(E6):DT(D15) DC(E7):DG(D14) DG(E8):DC(D13) DT(E9):DA(D12) DC(E10):DG(D11) DG(E11):DC(D10) DA(E12):DT(D9) DC(E13):DG(D8) DG(E14):DC(D7) DT(E15):DA(D6) DT(E16):DA(D5) DG(E17):DC(D4) DA(E18):DT(D3) DA(E19):DT(D2) DC(E20):DG(D1) chainA ( 26) THR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 ( 27) TYR27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 70) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 ( 84) SER84 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 (104) PHE104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (145) ASN145 0 0 0 0 0 0 0 0 0 0 0 0 0 22 4 2 0 0 0 0 (146) ASN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (234) GLU234 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) ARG236 1 20 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ARG292 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TYR293 0 0 0 15 30 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) ASN294 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 (318) ASP318 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) LYS319 0 0 0 0 28 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) GLN357 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) LYS358 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB (148) GLN148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (266) ASN266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 (269) PHE269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52 0 0 0 0 0 (345) PHE345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 (350) VAL350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chainC (148) GLN148 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ASN266 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) PHE269 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) PHE345 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (350) VAL350 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) THR352 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence msagklpegwviapvstvttlirgvTYkkeqainylkddylpliranniqngkfdttdlvfvpknlvkeSqkispediviamsSgsksvvgksahqhlpfecsFgafcgvlrpeklifsgfiahftksslyrnkisslsaganiNNikpasfdlinipipplaeqkiiaekldtllaqvdstkarfeqipqilkrfrqavlggavngkltekwrnfepqhsvfkklnfesiltElRnglsskpnesgvghpilrissvraghvdqndirflecseselnrhklqdgdllftRYNgslefvgvcgllkklqhqnllypDKlirarltkdalpeyieiffsspsarnammncvkttsgQKgisgkdiksqvvllppvkeqaeivrrveqlfayadtiekqvnnalarvnnltqsilakafrgeltaqwraenpdlisgensaaallekikaeraasggkkasrkks/mnnndlvaklwklcdnlrdggvsyqnyvnelasllflkmcketgqeaeylpegyrwddlksrigqeqlqfyrkmlvhlgeddkklvqavfhnvsttitepkqitalvsnmdsldwyngahgksrddfgdmyegllqknanetksgagQyftprpliktiihllkpqprevvqdpaagtagflieadryvksqtndlddldgdtqdfqihrafiglelvpgtrrlalmncllhdiegnldhggairlgntlgsdgenlpkahivatNppFgsaagtnitrtfvhptsnkqlcfmqhiietlhpggraavvvpdnvlfeggkgtdirrdlmdkchlhtilrlptgiFyaqgVktnvlfftkgtvanpnqdknctddvwvydlrtnmpsfgkrtpftdehlqpfervygedphglsprtegewsfnaeetevadseenkntdqhlatsrwrkfsrewirtaksdsldiswlkdkdsidadslpepdvlaaeamgelvqalseldalmrelgasdeadlqrqlleeafggvke/mnnndlvaklwklcdnlrdggvsyqnyvnelasllflkmcketgqeaeylpegyrwddlksrigqeqlqfyrkmlvhlgeddkklvqavfhnvsttitepkqitalvsnmdsldwyngahgksrddfgdmyegllqknanetksgagQyftprpliktiihllkpqprevvqdpaagtagflieadryvksqtndlddldgdtqdfqihrafiglelvpgtrrlalmncllhdiegnldhggairlgntlgsdgenlpkahivatNppFgsaagtnitrtfvhptsnkqlcfmqhiietlhpggraavvvpdnvlfeggkgtdirrdlmdkchlhtilrlptgiFyaqgVkTnvlfftkgtvanpnqdknctddvwvydlrtnmpsfgkrtpftdehlqpfervygedphglsprtegewsfnaeetevadseenkntdqhlatsrwrkfsrewirtaksdsldiswlkdkdsidadslpepdvlaaeamgelvqalseldalmrelgasdeadlqrqlleeafggvke >2y7h_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=ATOMIC MODEL OF THE DNA-BOUND METHYLASE COMPLEX FROM THE TYPE I RESTRICTION-MODIFICATION ENZYME ECOKI (M2S1). BASED ON FITTING INTO EM MAP 1534. organism=ESCHERICHIA COLI DNA sequence DG(D1):DC(E20) DT(D2):DA(E19) DT(D3):DA(E18) DC(D4):DG(E17) DA(D5):DT(E16) DA(D6):DT(E15) DC(D7):DG(E14) DG(D8):DC(E13) DT(D9):DA(E12) DC(D10):DG(E11) DG(D11):DC(E10) DA(D12):DT(E9) DC(D13):DG(E8) DG(D14):DC(E7) DT(D15):DA(E6) DG(D16):DC(E5) DC(D17):DG(E4) DA(D18):DT(E3) DA(D19):DT(E2) DC(D20):DG(E1) chainB (148) GLN148 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ASN266 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) PHE269 0 0 0 0 0 52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) PHE345 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (350) VAL350 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnnndlvaklwklcdnlrdggvsyqnyvnelasllflkmcketgqeaeylpegyrwddlksrigqeqlqfyrkmlvhlgeddkklvqavfhnvsttitepkqitalvsnmdsldwyngahgksrddfgdmyegllqknanetksgagQyftprpliktiihllkpqprevvqdpaagtagflieadryvksqtndlddldgdtqdfqihrafiglelvpgtrrlalmncllhdiegnldhggairlgntlgsdgenlpkahivatNppFgsaagtnitrtfvhptsnkqlcfmqhiietlhpggraavvvpdnvlfeggkgtdirrdlmdkchlhtilrlptgiFyaqgVktnvlfftkgtvanpnqdknctddvwvydlrtnmpsfgkrtpftdehlqpfervygedphglsprtegewsfnaeetevadseenkntdqhlatsrwrkfsrewirtaksdsldiswlkdkdsidadslpepdvlaaeamgelvqalseldalmrelgasdeadlqrqlleeafggvke >2y9z_B: title=CHROMATIN REMODELING FACTOR ISW1A(DEL_ATPASE) IN DNA COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(F2):DG(E47) DG(F3):DC(E46) DC(F4):DG(E45) DA(F5):DT(E44) DT(F6):DA(E43) DG(F7):DC(E42) DA(F8):DT(E41) DA(F9):DT(E40) DC(F10):DG(E39) DC(F11):DG(E38) DC(F12):DG(E37) DG(F13):DC(E36) DT(F14):DA(E35) DA(F15):DT(E34) DT(F16):DA(E33) DA(F17):DT(E32) DT(F18):DA(E31) DA(F19):DT(E30) DA(F20):DT(E29) DG(F21):DC(E28) DC(F22):DG(E27) DC(F23):DG(E26) DT(F24):DA(E25) chainB (540) ASP693 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 (542) LYS695 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 3 prot.sequence aheqvepalipsnwtsviplltsdfknqysvisrlknpnmkpvpyagdiiklmafinkfssffhsdlqnlsfqdfevgldlypgdpngsaagivkgpedtslllypdfmaikdivycqdkmnllflslldltftenfdgksakkkgplttwenlkssskkvfsnplyrlrlvarewgyprewrqqlpsdqdiskpktalfeqdeqtpvvdpshpeiltpniytwnaneplplesnplynremdkngilalkpmdrvvllraltdwcashssaihdeiyklthgkkdpvfgiqtqqvprytiegvdntinqfkklcsliqsryeirskkkhfvkqlkegkkpdlsrkleilkeikaelknavksekdellfslydkwvplfegelpdqplanpfserlyklrlqefflgrvphigdfymprlhsygdslemstftdlrnlqallskfknneynaftlfendgqsmsaqfklfyhdtpslahdvargrntsgkvywyelchdsatlleflefldykivkpqdekkettdnnpsintnplpkDaKyntarkklqilkeflsdyyfilrqfeqmkvqfadmkpgkrqlrriqrqtvnyn >2ypa_A:HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURE OF THE SCL:E47:LMO2:LDB1 COMPLEX BOUND TO DNA organism=HOMO SAPIENS DNA sequence DA(E4):DT(F32) DC(E5):DG(F31) DC(E6):DG(F30) DA(E7):DT(F29) DT(E8):DA(F28) DC(E9):DG(F27) DT(E10):DA(F26) DG(E11):DC(F25) DT(E12):DA(F24) DT(E13):DA(F23) DC(E14):DG(F22) chainA ( 8) ARG189 0 0 0 0 0 0 1 1 0 0 0 ( 12) ASN193 0 0 0 0 0 0 4 0 0 0 0 ( 14) ARG195 0 0 0 0 0 0 0 0 0 0 1 ( 15) GLU196 0 0 0 0 0 0 6 9 2 0 0 ( 18) ARG199 0 0 0 0 0 0 0 3 3 0 0 ( 19) GLN200 0 0 0 0 1 0 0 0 0 0 0 prot.sequence phtkvvrRiftNsRErwRQqnvngafaelrklipthppdkklskneilrlamkyinflakllndqee >2ypa_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURE OF THE SCL:E47:LMO2:LDB1 COMPLEX BOUND TO DNA organism=HOMO SAPIENS DNA sequence DG(F22):DC(E14) DA(F23):DT(E13) DA(F24):DT(E12) DC(F25):DG(E11) DA(F26):DT(E10) DG(F27):DC(E9) DA(F28):DT(E8) DT(F29):DA(E7) DG(F30):DC(E6) DG(F31):DC(E5) DT(F32):DA(E4) chainA ( 8) ARG189 0 0 0 1 1 0 0 0 0 0 0 ( 12) ASN193 0 0 0 0 4 0 0 0 0 0 0 ( 14) ARG195 1 0 0 0 0 0 0 0 0 0 0 ( 15) GLU196 0 0 2 9 6 0 0 0 0 0 0 ( 18) ARG199 0 0 3 3 0 0 0 0 0 0 0 ( 19) GLN200 0 0 0 0 0 0 1 0 0 0 0 chainB ( 14) ASN552 0 0 0 0 0 0 0 3 0 0 0 ( 16) ARG554 0 0 0 0 0 0 0 0 0 0 1 ( 17) GLU555 0 0 0 0 0 0 1 6 8 0 0 ( 20) ARG558 0 0 0 0 0 0 0 0 6 5 0 prot.sequence phtkvvrRiftNsRErwRQqnvngafaelrklipthppdkklskneilrlamkyinflakllndqee/ekdlrdrerrmanNaRErvRvrdineafrelgrmcqmhlksdkaqtkllilqqavqvilgleqqvrernlnpk >2ypa_B:HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURE OF THE SCL:E47:LMO2:LDB1 COMPLEX BOUND TO DNA organism=HOMO SAPIENS DNA sequence DA(E4):DT(F32) DC(E5):DG(F31) DC(E6):DG(F30) DA(E7):DT(F29) DT(E8):DA(F28) DC(E9):DG(F27) DT(E10):DA(F26) DG(E11):DC(F25) DT(E12):DA(F24) DT(E13):DA(F23) DC(E14):DG(F22) chainB ( 14) ASN552 0 0 0 3 0 0 0 0 0 0 0 ( 16) ARG554 1 0 0 0 0 0 0 0 0 0 0 ( 17) GLU555 0 0 8 6 1 0 0 0 0 0 0 ( 20) ARG558 0 5 6 0 0 0 0 0 0 0 0 prot.sequence ekdlrdrerrmanNaRErvRvrdineafrelgrmcqmhlksdkaqtkllilqqavqvilgleqqvrernlnpk >2ypb_A:HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURE OF THE SCL:E47 COMPLEX BOUND TO DNA organism=? DNA sequence DG(F22):DC(E14) DA(F23):DT(E13) DA(F24):DT(E12) DC(F25):DG(E11) DA(F26):DT(E10) DG(F27):DC(E9) DA(F28):DT(E8) DT(F29):DA(E7) DG(F30):DC(E6) DG(F31):DC(E5) DT(F32):DA(E4) chainA ( 13) ASN193 0 0 0 0 4 0 0 0 0 0 0 ( 15) ARG195 7 2 0 0 0 0 0 0 0 0 0 ( 16) GLU196 0 0 1 9 9 0 0 0 0 0 0 ( 19) ARG199 0 0 6 3 0 0 0 0 0 0 0 ( 20) GLN200 0 0 0 0 0 0 3 0 0 0 0 prot.sequence gphtkvvrriftNsRErwRQqnvngafaelrklipthppdkklskneilrlamkyinflakllndqe >2ypb_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURE OF THE SCL:E47 COMPLEX BOUND TO DNA organism=HOMO SAPIENS DNA sequence DG(F22):DC(E14) DA(F23):DT(E13) DA(F24):DT(E12) DC(F25):DG(E11) DA(F26):DT(E10) DG(F27):DC(E9) DA(F28):DT(E8) DT(F29):DA(E7) DG(F30):DC(E6) DG(F31):DC(E5) DT(F32):DA(E4) chainA ( 13) ASN193 0 0 0 0 4 0 0 0 0 0 0 ( 15) ARG195 7 2 0 0 0 0 0 0 0 0 0 ( 16) GLU196 0 0 1 9 9 0 0 0 0 0 0 ( 19) ARG199 0 0 6 3 0 0 0 0 0 0 0 ( 20) GLN200 0 0 0 0 0 0 3 0 0 0 0 chainB ( 17) ASN552 0 0 0 0 0 0 0 4 0 0 0 ( 20) GLU555 0 0 0 0 0 0 0 6 10 0 0 ( 23) ARG558 0 0 0 0 0 0 0 0 6 0 0 prot.sequence gphtkvvrriftNsRErwRQqnvngafaelrklipthppdkklskneilrlamkyinflakllndqe/sleekdlrdrerrmanNarErvRvrdineafrelgrmcqmhlksdkaqtkllilqqavqvilgleqqvrernln >2ypf_A:Thiolase-like; title=STRUCTURE OF THE AVRBS3-DNA COMPLEX PROVIDES NEW INSIGHTS INTO THE INITIAL THYMINE-RECOGNITION MECHANISM organism=XANTHOMONAS CAMPESTRIS DNA sequence DT(B-1):DA(C1) DT(B0):DA(C0) DA(B1):DT(C-1) DT(B2):DA(C-2) DA(B3):DT(C-3) DT(B4):DA(C-4) DA(B5):DT(C-5) DA(B6):DT(C-6) DA(B7):DT(C-7) DC(B8):DG(C-8) DC(B9):DG(C-9) DT(B10):DA(C-10) DA(B11):DT(C-11) DA(B12):DT(C-12) DC(B13):DG(C-13) DC(B14):DG(C-14) DC(B15):DG(C-15) DT(B16):DA(C-16) DC(B17):DG(C-17) DT(B18):DA(C-18) DA(B19):DT(C-19) chainA ( 80) ARG266 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ASP301 0 5 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ILE369 0 0 0 5 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) ILE437 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) ILE471 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ILE505 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 0 0 0 0 0 (353) ASP539 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 (387) ASP573 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (455) ILE641 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 (489) ILE675 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 (523) ASP709 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 (557) ASP743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 (591) ASP777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (659) ASP845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 1 0 prot.sequence afthahivalsqhpaalatvavkyqdmiaalpeatheaivavakqwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiasnIggkqaletvqallpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiasnIggkqaletvqallpvlcqahgltpeqvvaiasnIggkqaletvqallpvlcqahgltpeqvvaiasnIggkqaletvqallpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiasnIggkqaletvqallpvlcqahgltpeqvvaiasnIggkqaletvqallpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqaagltpeqvvaiashDggkqaletvqrllpvl >2yvh_A:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF THE OPERATOR-BINDING FORM OF THE MULTI-DRUG BINDING TRANSCRIPTIONAL REPRESSOR CGMR organism=Corynebacterium glutamicum DNA sequence DT(E3):DA(F30) DA(E4):DT(F29) DA(E5):DT(F28) DC(E6):DG(F27) DT(E7):DA(F26) DG(E8):DC(F25) DT(E9):DA(F24) DA(E10):DT(F23) DC(E11):DG(F22) DC(E12):DG(F21) DG(E13):DC(F20) DA(E14):DT(F19) DC(E15):DG(F18) DC(E16):DG(F17) DG(H17):DC(G16) DG(H18):DC(G15) DT(H19):DA(G14) DC(H20):DG(G13) DG(H21):DC(G12) DG(H22):DC(G11) DT(H23):DA(G10) DA(H24):DT(G9) DC(H25):DG(G8) DA(H26):DT(G7) DG(H27):DC(G6) DT(H28):DA(G5) DT(H29):DA(G4) DA(H30):DT(G3) chainA ( 34) SER37 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 10 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER39 0 0 0 0 0 0 0 0 0 7 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ILE42 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR43 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence skkemilrtaidyigeysletlsydslaeatglSKSglIYhfpsrhalllgmhelladdwdkelrditrdpedplerlravvvtlaenvsrpellllidapshpdflnawrtvnhqwipdtddlendahkravylvqlaadglfvhdyihddvlskskrqamletilelip >2yvh_AC:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF THE OPERATOR-BINDING FORM OF THE MULTI-DRUG BINDING TRANSCRIPTIONAL REPRESSOR CGMR organism=Corynebacterium glutamicum DNA sequence DT(E3):DA(F30) DA(E4):DT(F29) DA(E5):DT(F28) DC(E6):DG(F27) DT(E7):DA(F26) DG(E8):DC(F25) DT(E9):DA(F24) DA(E10):DT(F23) DC(E11):DG(F22) DC(E12):DG(F21) DG(E13):DC(F20) DA(E14):DT(F19) DC(E15):DG(F18) DC(E16):DG(F17) DG(H17):DC(G16) DG(H18):DC(G15) DT(H19):DA(G14) DC(H20):DG(G13) DG(H21):DC(G12) DG(H22):DC(G11) DT(H23):DA(G10) DA(H24):DT(G9) DC(H25):DG(G8) DA(H26):DT(G7) DG(H27):DC(G6) DT(H28):DA(G5) DT(H29):DA(G4) DA(H30):DT(G3) chainA ( 34) SER37 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 10 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER39 0 0 0 0 0 0 0 0 0 7 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ILE42 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR43 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 34) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 9 0 0 0 0 0 0 0 0 0 ( 39) ILE42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 prot.sequence skkemilrtaidyigeysletlsydslaeatglSKSglIYhfpsrhalllgmhelladdwdkelrditrdpedplerlravvvtlaenvsrpellllidapshpdflnawrtvnhqwipdtddlendahkravylvqlaadglfvhdyihddvlskskrqamletilelip/skkemilrtaidyigeysletlsydslaeatglSKSglIYhfpsrhalllgmhelladdwdkelrditrdpedplerlravvvtlaenvsrpellllidapshpdflnawrtvnhqwipdtddlendahkravylvqlaadglfvhdyihddvlskskrqamletilelip >2z33_A:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=SOLUTION STRUCTURE OF THE DNA COMPLEX OF PHOB DNA- BINDING/TRANSACTIVATION DOMAIN organism=ESCHERICHIA COLI DNA sequence DA(B1):DT(C16) DC(B2):DG(C15) DT(B3):DA(C14) DG(B4):DC(C13) DT(B5):DA(C12) DC(B6):DG(C11) DA(B7):DT(C10) DT(B8):DA(C9) DA(B9):DT(C8) DA(B10):DT(C7) DA(B11):DT(C6) DT(B12):DA(C5) DC(B13):DG(C4) DT(B14):DA(C3) DG(B15):DC(C2) DT(B16):DA(C1) chainA ( 68) ARG68 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 69) THR69 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL72 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 ( 75) ARG75 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 76) ARG76 0 0 14 11 1 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG94 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 prot.sequence maveeviemqglsldptshrvmageeplemgptefkllhffmthpervysreqllnhvwgtnvyvedRTvdVhiRRlrkalepgghdrmvqtvRgtgyrfstrf >2z3x_ABC: title=STRUCTURE OF A PROTEIN-DNA COMPLEX ESSENTIAL FOR DNA PROTECTION IN SPORE OF BACILLUS SPECIES organism=Bacillus subtilis DNA sequence DC(E12):DG(D10) DC(E13):DG(D9) DC(E14):DG(D8) DC(E15):DG(D7) DC(E16):DG(D6) DC(E17):DG(D5) DC(E18):DG(D4) DC(E19):DG(D3) DC(E20):DG(D2) DC(E21):DG(D1) chainA ( 33) SER34 0 0 0 4 0 0 0 0 0 0 ( 36) ASN37 0 0 0 2 0 0 0 0 0 0 ( 44) THR45 0 0 0 0 1 11 4 0 0 0 chainB ( 33) SER34 0 0 10 2 0 0 0 0 0 0 ( 36) ASN37 0 0 2 0 0 0 0 0 0 0 ( 44) THR45 7 2 0 0 0 0 0 0 0 0 chainC ( 33) SER34 0 0 0 0 0 0 0 0 0 4 ( 36) ASN37 0 0 0 0 0 0 0 0 0 2 ( 44) THR45 0 0 0 0 0 0 4 9 2 0 prot.sequence akllipqaasaieqmkleiasefgvqlgaettSraNgsvggeiTkrlvrlaqqnmg/akllipqaasaieqmkleiasefgvqlgaettSraNgsvggeiTkrlvrlaqqnmg/akllipqaasaieqmkleiasefgvqlgaettSraNgsvggeiTkrlvrlaqqnmg >2z3x_B: title=STRUCTURE OF A PROTEIN-DNA COMPLEX ESSENTIAL FOR DNA PROTECTION IN SPORE OF BACILLUS SPECIES organism=Bacillus subtilis DNA sequence DC(E12):DG(D10) DC(E13):DG(D9) DC(E14):DG(D8) DC(E15):DG(D7) DC(E16):DG(D6) DC(E17):DG(D5) DC(E18):DG(D4) DC(E19):DG(D3) DC(E20):DG(D2) DC(E21):DG(D1) chainB ( 33) SER34 0 0 10 2 0 0 0 0 0 0 ( 36) ASN37 0 0 2 0 0 0 0 0 0 0 ( 44) THR45 7 2 0 0 0 0 0 0 0 0 prot.sequence akllipqaasaieqmkleiasefgvqlgaettSraNgsvggeiTkrlvrlaqqnmg >2z6a_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=S-ADENOSYL-L-METHIONINE-DEPENDENT METHYL TRANSFER: OBSERVABLE PRECATALYTIC INTERMEDIATES DURING DNA CYTOSINE METHYLATION organism=Haemophilus parahaemolyticus DNA sequence DG(D422):DC(C413) DA(D423):DT(C412) DT(D424):DA(C411) DA(D425):DT(C410) DG(D426):DC(C409) DG(D428):DC(C407) DC(D429):DG(C406) DT(D430):DA(C405) DA(D431):DT(C404) DT(D432):DA(C403) DC(D433):DG(C402) chainA ( 86) ILE86 0 0 3 3 1 0 0 0 0 0 0 ( 87) SER87 0 0 0 0 8 8 0 0 0 0 0 (237) GLN237 0 0 0 0 24 23 0 0 0 0 0 (239) GLU239 0 0 0 0 0 3 1 0 0 0 0 (240) ARG240 0 0 0 11 12 0 0 0 0 0 0 (254) TYR254 0 0 0 0 0 0 1 0 0 0 0 (260) ALA260 0 0 0 0 0 0 0 2 0 0 0 (296) SER296 0 0 0 0 0 0 0 0 1 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpaqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvrlgivgkggQgERiystrgiaitlsaYgggifAktggylvngktrklhprecarvmgypdsykvhpstSqaykqfgnsvvinvlqyiaynigsslnfkpy >2z6q_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=TERNARY STRUCTURE OF ARG165ALA M.HHAI C5-CYTOSINE DNA METHYLTRANSFERASE WITH UNMODIFIED DNA AND ADOHCY organism=Haemophilus parahaemolyticus DNA sequence DG(d2):DC(c12) DA(d3):DT(c11) DT(d4):DA(c10) DA(d5):DT(c9) DG(d6):DC(c8) DG(d7):DG(c7) DC(d8):DC(c6) DT(d9):DG(c5) DA(d10):DA(c4) DT(d11):DT(c3) DC(d12):DA(c2) chainA ( 86) ILE86 0 0 4 5 3 0 0 0 0 0 0 ( 87) SER87 0 0 0 0 7 8 0 0 0 0 0 (228) ARG228 0 0 0 1 0 0 0 0 0 0 0 (237) GLN237 0 0 0 0 31 31 3 0 0 0 0 (239) GLU239 0 0 0 0 0 0 3 1 0 0 0 (240) ARG240 0 0 0 12 10 1 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreaiymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgERiystrgiaitlsaygggifaktggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy >2z6u_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=TERNARY STRUCTURE OF THE GLU119ALA M.HHAI, C5-CYTOSINE DNA METHYLTRANSFERASE, WITH UNMODIFIED DNA AND ADOHCY organism=Haemophilus parahaemolyticus DNA sequence DG(D422):DC(C413) DA(D423):DT(C412) DT(D424):DA(C411) DA(D425):DT(C410) DG(D426):DC(C409) DC(D427):DG(C408) DG(D428):DC(C407) DC(D429):DG(C406) DT(D430):DA(C405) DA(D431):DT(C404) DT(D432):DA(C403) DC(D433):DG(C402) chainA ( 81) CYS81 0 0 0 0 0 11 0 0 0 0 0 0 ( 86) ILE86 0 0 3 2 6 0 0 0 0 0 0 0 ( 87) SER87 0 0 0 0 10 0 8 0 0 0 0 0 (120) ASN120 0 0 0 0 0 2 0 0 0 0 0 0 (121) VAL121 0 0 0 0 0 4 0 0 0 0 0 0 (163) ARG163 0 0 0 0 0 3 0 0 0 0 0 0 (165) ARG165 0 0 0 0 0 10 0 0 0 0 0 0 (228) ARG228 0 0 0 1 0 0 0 0 0 0 0 0 (237) GLN237 0 0 0 0 60 16 21 0 0 0 0 0 (239) GLU239 0 0 0 0 0 0 3 1 0 0 0 0 (240) ARG240 0 0 0 8 22 1 0 0 0 0 0 0 (254) TYR254 0 0 0 0 0 0 0 1 0 0 0 0 (260) ALA260 0 0 0 0 0 0 0 0 2 0 0 0 (296) SER296 0 0 0 0 0 0 0 0 0 1 0 0 (304) ASN304 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpCqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmaNVknfashdngntlevvkntmneldysfhakvlnaldygipqkReRiymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgERiystrgiaitlsaYgggifAktggylvngktrklhprecarvmgypdsykvhpstSqaykqfgNsvvinvlqyiaynigsslnfkpy >2z9o_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DIMERIC FORM OF REPE IN COMPLEX WITH THE REPE OPERATOR DNA organism=Escherichia coli DNA sequence DT(C1):DA(D66) DT(C2):DA(D65) DA(C3):DT(D64) DG(C4):DC(D63) DT(C5):DA(D62) DG(C6):DC(D61) DT(C7):DA(D60) DG(C8):DC(D59) DA(C9):DT(D58) DC(C10):DG(D57) DA(C11):DT(D56) DA(C12):DT(D55) DT(C13):DA(D54) DC(C14):DG(D53) DT(C15):DA(D52) DA(C16):DT(D51) DA(C17):DT(D50) DA(C18):DT(D49) DA(C19):DT(D48) DA(C20):DT(D47) DC(C21):DG(D46) DT(C22):DA(D45) DT(C23):DA(D44) DG(C24):DC(D43) DT(C25):DA(D42) DC(C26):DG(D41) DA(C27):DT(D40) DC(C28):DG(D39) DA(C29):DT(D38) DC(C30):DG(D37) DT(C31):DA(D36) DT(C32):DA(D35) DC(C33):DG(D34) chainA (168) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (169) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 (171) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 2 0 0 0 0 (173) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 (174) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 (177) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 14 0 0 0 0 0 0 (178) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 7 0 0 0 0 0 0 0 0 prot.sequence sndlteaayslsrdqkrmlylfvdqirdgiceihvakyaeifgltsaeaskdirqalksfagkevvfyrpeedagdekgyesfpwfikrahspsrglysvhinpylipffiglqnrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgrqtthivfsfrditsmttg >2z9o_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DIMERIC FORM OF REPE IN COMPLEX WITH THE REPE OPERATOR DNA organism=Escherichia coli DNA sequence DG(D34):DC(C33) DA(D35):DT(C32) DA(D36):DT(C31) DG(D37):DC(C30) DT(D38):DA(C29) DG(D39):DC(C28) DT(D40):DA(C27) DG(D41):DC(C26) DA(D42):DT(C25) DC(D43):DG(C24) DA(D44):DT(C23) DA(D45):DT(C22) DG(D46):DC(C21) DT(D47):DA(C20) DT(D48):DA(C19) DT(D49):DA(C18) DT(D50):DA(C17) DT(D51):DA(C16) DA(D52):DT(C15) DG(D53):DC(C14) DA(D54):DT(C13) DT(D55):DA(C12) DT(D56):DA(C11) DG(D57):DC(C10) DT(D58):DA(C9) DC(D59):DG(C8) DA(D60):DT(C7) DC(D61):DG(C6) DA(D62):DT(C5) DC(D63):DG(C4) DT(D64):DA(C3) DA(D65):DT(C2) DA(D66):DT(C1) chainA (168) SER197 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) TYR198 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG200 0 0 0 0 2 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) PRO202 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ASP203 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG206 0 0 0 0 0 0 14 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ARG207 0 0 0 0 0 0 0 0 7 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (168) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (169) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (171) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 7 1 0 0 0 0 (173) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 4 0 0 0 0 (174) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 1 0 0 0 0 0 0 (177) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 6 0 0 0 0 0 0 (178) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 14 7 0 0 0 0 0 0 0 0 (204) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 prot.sequence sndlteaayslsrdqkrmlylfvdqirdgiceihvakyaeifgltsaeaskdirqalksfagkevvfyrpeedagdekgyesfpwfikrahspsrglysvhinpylipffiglqnrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgrqtthivfsfrditsmttg/qsndlteaayslsrdqkrmlylfvdqidgiceihvakyaeifgltsaeaskdirqalksfagkevvfyrpeedagdekgyesfpwfikrahspsrglysvhinpylipffiglqnrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdits >2zcj_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=TERNARY STRUCTURE OF THE GLU119GLN M.HHAI, C5-CYTOSINE DNA METHYLTRANSFERASE, WITH UNMODIFIED DNA AND ADOHCY organism=Haemophilus parahaemolyticus DNA sequence DG(D422):DC(C413) DA(D423):DT(C412) DT(D424):DA(C411) DA(D425):DT(C410) DG(D426):DC(C409) DC(D427):DG(C408) DG(D428):DC(C407) DC(D429):DG(C406) DT(D430):DA(C405) DA(D431):DT(C404) DT(D432):DA(C403) DC(D433):DG(C402) chainA ( 81) CYS81 0 0 0 0 0 8 0 0 0 0 0 0 ( 86) ILE86 0 0 2 2 4 0 0 0 0 0 0 0 ( 87) SER87 0 0 0 0 14 0 8 0 0 0 0 0 (119) GLN119 0 0 0 0 0 11 0 0 0 0 0 0 (121) VAL121 0 0 0 0 0 4 0 0 0 0 0 0 (163) ARG163 0 0 0 0 0 4 0 0 0 0 0 0 (165) ARG165 0 0 0 0 0 11 0 0 0 0 0 0 (228) ARG228 0 0 0 1 0 0 0 0 0 0 0 0 (237) GLN237 0 0 0 0 60 14 24 0 0 0 0 0 (239) GLU239 0 0 0 0 0 0 2 1 0 0 0 0 (240) ARG240 0 0 0 11 22 1 0 0 0 0 0 0 (254) TYR254 0 0 0 0 0 0 0 1 0 0 0 0 (260) ALA260 0 0 0 0 0 0 0 0 2 0 0 0 (261) LYS261 0 0 0 0 0 0 0 0 0 1 0 0 (296) SER296 0 0 0 0 0 0 0 0 0 1 0 0 (304) ASN304 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpCqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmQnVknfashdngntlevvkntmneldysfhakvlnaldygipqkReRiymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgERiystrgiaitlsaYgggifAKtggylvngktrklhprecarvmgypdsykvhpstSqaykqfgNsvvinvlqyiaynigsslnfkpy >2zhg_A:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF SOXR IN COMPLEX WITH DNA organism=Escherichia coli DNA sequence DG(B1) DC(B2) DC(B3) DT(B4) DC(B5) DA(B6) DA(B7) DG(B8) DT(B9) DT(B10) DA(B11) DA(B12) DC(B13) DT(B14) DT(B15) DG(B16) DA(B17) DG(B18) DG(B19) DC(B20) chainA ( 17) SER26 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 ( 21) PHE30 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 0 0 0 prot.sequence alltpgevakrsgvavSalhFyeskglitsirnsgnqrrykrdvlryvaiikiaqrigiplatigeafgvtlsakewkqlssqwreeldrrihtlvalrdeldgcigcgclsrsdcplrnp >2zkd_B:PUA_domain-like; title=CRYSTAL STRUCTURE OF THE SRA DOMAIN OF MOUSE NP95 IN COMPLEX WITH HEMI-METHYLATED CPG DNA organism=Mus musculus DNA sequence DG(F1):DC(E12) DC(F2):DG(E11) DA(F3):DT(E10) DA(F4):DT(E9) DT(F5):DA(E8) DC(F6):DG(E7) 5CM(F7):DG(E6) DG(F8):DC(E5) DG(F9):DC(E4) DT(F10):DA(E3) DA(F11):DT(E2) DG(F12):DC(E1) chainB ( 4) ALA407 0 0 0 0 0 0 0 1 1 0 0 0 ( 5) CYS408 0 0 0 0 0 0 1 1 0 0 0 0 ( 47) HIS450 0 0 0 0 0 14 11 0 0 0 0 0 ( 48) VAL451 0 0 0 0 0 16 3 0 0 0 0 0 ( 65) ALA468 0 0 0 0 0 0 2 0 0 0 0 0 ( 68) TYR471 0 0 0 0 0 0 33 0 0 0 0 0 ( 71) ASP474 0 0 0 0 0 0 11 0 0 0 0 0 ( 80) TYR483 0 0 0 0 0 0 25 0 0 0 0 0 ( 81) THR484 0 0 0 0 0 0 2 0 0 0 0 0 ( 83) SER486 0 0 0 0 0 0 1 0 0 0 0 0 ( 88) LEU491 0 0 0 0 0 4 0 0 0 0 0 0 ( 91) ASN494 0 0 0 0 0 2 0 6 0 0 0 0 ( 92) LYS495 0 0 0 0 0 0 0 0 1 0 0 0 ( 93) ARG496 0 0 0 0 0 56 15 25 0 0 0 0 prot.sequence sgmACvgrttectivpanhfgpipgvpvgtmwrfrvqvsesgvhrpHVagihgrsndgayslvlaggyeddvdngnyftytgsggrdLsgNKRtagqssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtrqlgltmqyp >2zke_A:PUA_domain-like; title=CRYSTAL STRUCTURE OF THE SRA DOMAIN OF MOUSE NP95 IN COMPLEX WITH HEMI-METHYLATED CPG DNA organism=Mus musculus DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DA(D3):DT(C10) DA(D4):DT(C9) DT(D5):DA(C8) DC(D6):DG(C7) 5CM(D7):DG(C6) DG(D8):DC(C5) DG(D9):DC(C4) DT(D10):DA(C3) DA(D11):DT(C2) DG(D12):DC(C1) chainA ( 4) ALA407 0 0 0 0 0 0 0 1 1 0 0 0 ( 5) CYS408 0 0 0 0 0 0 1 1 0 0 0 0 ( 47) HIS450 0 0 0 0 0 8 12 0 0 0 0 0 ( 48) VAL451 0 0 0 0 0 16 2 0 0 0 0 0 ( 65) ALA468 0 0 0 0 0 0 2 0 0 0 0 0 ( 68) TYR471 0 0 0 0 0 0 27 0 0 0 0 0 ( 71) ASP474 0 0 0 0 0 0 11 0 0 0 0 0 ( 80) TYR483 0 0 0 0 0 0 31 0 0 0 0 0 ( 81) THR484 0 0 0 0 0 0 2 0 0 0 0 0 ( 83) SER486 0 0 0 0 0 0 1 0 0 0 0 0 ( 88) LEU491 0 0 0 0 0 2 0 0 0 0 0 0 ( 91) ASN494 0 0 0 0 0 0 0 7 0 0 0 0 ( 92) LYS495 0 0 0 0 0 0 0 0 2 0 0 0 ( 93) ARG496 0 0 0 0 0 48 14 23 0 0 0 0 ( 94) THR497 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence sgmACvgrttectivpanhfgpipgvpvgtmwrfrvqvsesgvhrpHVagihgrsndgayslvlaggyeddvdngnyftytgsggrdLsgNKRTagqssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtrqlgltmqype >2zkf_A:PUA_domain-like; title=CRYSTAL STRUCTURE OF THE SRA DOMAIN OF MOUSE NP95 IN COMPLEX WITH HEMI-METHYLATED CPG DNA organism=Mus musculus DNA sequence DC(C2):DG(D11) DA(C3):DT(D10) DC(C4):DG(D9) DC(C5):DG(D8) DG(C6):5CM(D7) DG(C7):DC(D6) DA(C8):DT(D5) DT(C9):DA(D4) DA(C10):DT(D3) DG(C11):DC(D2) chainA ( 3) ALA407 0 0 1 4 0 0 0 0 0 0 ( 4) CYS408 0 0 0 2 1 0 0 0 0 0 ( 46) HIS450 0 0 0 0 11 6 0 0 0 0 ( 47) VAL451 0 0 0 0 3 7 0 0 0 0 ( 64) ALA468 0 0 0 0 3 0 0 0 0 0 ( 67) TYR471 0 0 0 0 23 0 0 0 0 0 ( 70) ASP474 0 0 0 0 11 0 0 0 0 0 ( 79) TYR483 0 0 0 0 26 0 0 0 0 0 ( 80) THR484 0 0 0 0 1 0 0 0 0 0 ( 82) SER486 0 0 0 0 1 0 0 0 0 0 ( 87) LEU491 0 0 0 0 0 2 0 0 0 0 ( 90) ASN494 0 0 0 12 0 1 0 0 0 0 ( 92) ARG496 0 0 0 50 16 29 0 0 0 0 (140) LYS544 0 0 1 0 0 0 0 0 0 0 prot.sequence gmACvgrttectivpanhfgpipgvpvgtmwrfrvqvsesgvhrpHVagihgrsndgayslvlaggyeddvdngnyftytgsggrdLsgNkRtagqssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmKggkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtrqlgltmqype >2zo0_B:PUA_domain-like; title=MOUSE NP95 SRA DOMAIN DNA SPECIFIC COMPLEX 1 organism=Mus musculus DNA sequence DC(D402):DG(E433) DC(D403):DG(E432) DA(D404):DT(E431) DT(D405):DA(E430) DG(D406):DC(E428) DC(D407):DG(E427) DG(D408):5CM(E426) DC(D409):DG(E425) DT(D410):DA(E424) DG(D411):DC(E423) DA(D412):DT(E422) DC(D413):DG(E421) chainB ( 34) HIS450 0 0 0 0 0 0 4 9 3 0 0 0 ( 35) VAL451 0 0 0 0 0 0 1 7 0 0 0 0 ( 38) ILE454 0 0 0 0 0 0 1 0 0 0 0 0 ( 52) ALA468 0 0 0 0 0 0 1 0 0 0 0 0 ( 55) TYR471 0 0 0 0 0 0 23 0 0 0 0 0 ( 58) ASP474 0 0 0 0 0 0 11 0 0 0 0 0 ( 67) TYR483 0 0 0 0 0 0 28 0 0 0 0 0 ( 68) THR484 0 0 0 0 0 0 2 0 0 0 0 0 ( 70) SER486 0 0 0 0 0 0 1 0 0 0 0 0 ( 75) LEU491 0 0 0 0 0 0 0 2 0 0 0 0 ( 78) ASN494 0 0 0 0 0 16 0 0 0 0 0 0 ( 80) ARG496 0 0 0 0 0 56 17 28 0 0 0 0 ( 81) THR497 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence hmpanhfgpipgvpvgtmwrfrvqvsesgvhrpHVagihgrsndgayslvlaggyeddvdngnyftytgsggrdLsgNkRTagqssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtrqlgltmqypegylealankeks >2zo1_B:PUA_domain-like; title=MOUSE NP95 SRA DOMAIN DNA SPECIFIC COMPLEX 2 organism=Mus musculus DNA sequence DG(E421):DC(D413) DT(E422):DA(D412) DC(E423):DG(D411) DA(E424):DT(D410) DG(E425):DC(D409) 5CM(E426):DG(D408) DG(E427):DC(D407) DC(E428):DG(D406) DA(E430):DT(D405) chainB ( 34) HIS450 0 0 0 3 20 5 0 0 0 ( 35) VAL451 0 0 0 0 18 0 0 0 0 ( 52) ALA468 0 0 0 0 0 1 0 0 0 ( 55) TYR471 0 0 0 0 0 24 0 0 0 ( 58) ASP474 0 0 0 0 0 11 0 0 0 ( 67) TYR483 0 0 0 0 0 28 0 0 0 ( 68) THR484 0 0 0 0 0 2 0 0 0 ( 70) SER486 0 0 0 0 0 1 0 0 0 ( 75) LEU491 0 0 0 0 2 0 0 0 0 ( 78) ASN494 0 0 0 0 0 0 9 0 0 ( 79) LYS495 0 0 0 0 0 0 0 2 0 ( 80) ARG496 0 0 0 0 56 14 29 0 0 (128) LYS544 0 0 0 0 0 0 0 1 0 prot.sequence hmpanhfgpipgvpvgtmwrfrvqvsesgvhrpHVagihgrsndgayslvlaggyeddvdngnyftytgsggrdLsgNKRtagqssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmKggkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtrqlgltmqypegylealank >2zo2_B:PUA_domain-like; title=MOUSE NP95 SRA DOMAIN NON-SPECIFIC DNA COMPLEX organism=MUS MUSCULUS DNA sequence DA(E13):DT(D12) DA(E14):DT(D11) DC(E15):DG(D10) DT(E16):DA(D9) DG(E17):DC(D8) DC(E18):DG(D7) DG(E19):DC(D6) DC(E20):DG(D5) DA(E21):DT(D4) DG(E22):DC(D3) DT(E23):DA(D2) DT(E24):DA(D1) chainB ( 35) VAL451 8 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmpanhfgpipgvpvgtmwrfrvqvsesgvhrphVagihgrsndgayslvlaggyeddvdngnyftytgsggrdgqssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtrqlgltmqypegylealankeks >3a01_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF ARISTALESS AND CLAWLESS HOMEODOMAINS BOUND TO DNA organism=DROSOPHILA MELANOGASTER DNA sequence DC(D1):DG(C17) DC(D2):DG(C16) DG(D3):DC(C15) DC(D4):DG(C14) DA(D5):DT(C13) DA(D6):DT(C12) DT(D7):DA(C11) DT(D8):DA(C10) DA(D9):DT(C9) DA(D10):DT(C8) DT(D11):DA(C7) DT(D12):DA(C6) DA(D13):DT(C5) DA(D14):DT(C4) DG(D15):DC(C3) DC(D16):DG(C2) DC(D17):DG(C1) chainA ( 6) HIS175 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG180 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG185 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 20) ARG189 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 ( 61) LYS230 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR231 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 65) GLN234 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN235 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 chainB ( 2) ARG87 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 ( 4) ARG89 0 0 0 0 0 0 0 0 0 0 0 2 5 6 0 0 0 ( 45) GLN130 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 46) VAL131 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 49) GLN134 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 ( 50) ASN135 0 0 0 0 0 0 0 0 0 2 10 8 0 0 0 0 0 prot.sequence arrigHpyqnRtppkRkkpRtsftriqvaelekrfhkqkylasaeraalarglkmtdaqvKTwfQNrrtkwrrqtaee/rRyRttftsfqleelekafsrthypdvftreelamkiglteariQVwfQNrrakwrk >3a01_E:Homeodomain-like; title=CRYSTAL STRUCTURE OF ARISTALESS AND CLAWLESS HOMEODOMAINS BOUND TO DNA organism=DROSOPHILA MELANOGASTER DNA sequence DC(H1):DG(G17) DC(H2):DG(G16) DG(H3):DC(G15) DC(H4):DG(G14) DA(H5):DT(G13) DA(H6):DT(G12) DT(H7):DA(G11) DT(H8):DA(G10) DA(H9):DT(G9) DA(H10):DT(G8) DT(H11):DA(G7) DT(H12):DA(G6) DA(H13):DT(G5) DA(H14):DT(G4) DG(H15):DC(G3) DC(H16):DG(G2) DC(H17):DG(G1) chainE ( 1) HIS175 0 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG180 0 0 0 0 13 8 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG189 0 0 0 0 0 0 0 1 9 4 0 0 0 0 0 0 0 ( 52) THR231 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 55) GLN234 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN235 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 prot.sequence HpyqnRtppRtsftriqvaelekrfhkqkylasaeraalarglkmtdaqvkTwfQNrrtkwrrqtaee >3a01_EF:Homeodomain-like; title=CRYSTAL STRUCTURE OF ARISTALESS AND CLAWLESS HOMEODOMAINS BOUND TO DNA organism=DROSOPHILA MELANOGASTER DNA sequence DG(G1):DC(H17) DG(G2):DC(H16) DC(G3):DG(H15) DT(G4):DA(H14) DT(G5):DA(H13) DA(G6):DT(H12) DA(G7):DT(H11) DT(G8):DA(H10) DT(G9):DA(H9) DA(G10):DT(H8) DA(G11):DT(H7) DT(G12):DA(H6) DT(G13):DA(H5) DG(G14):DC(H4) DC(G15):DG(H3) DG(G16):DC(H2) DG(G17):DC(H1) chainE ( 1) HIS175 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 0 ( 6) ARG180 0 0 0 0 0 0 0 0 0 0 0 8 13 0 0 0 0 ( 10) ARG189 0 0 0 0 0 0 0 4 9 1 0 0 0 0 0 0 0 ( 52) THR231 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 ( 55) GLN234 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 ( 56) ASN235 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 chainF ( 2) ARG87 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG89 0 0 0 9 8 9 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN130 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 46) VAL131 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 49) GLN134 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 ( 50) ASN135 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 prot.sequence HpyqnRtppRtsftriqvaelekrfhkqkylasaeraalarglkmtdaqvkTwfQNrrtkwrrqtaee/rRyRttftsfqleelekafsrthypdvftreelamkiglteariQVwfQNrrakwrkqekv >3a46_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain; title=CRYSTAL STRUCTURE OF MVNEI1/THF COMPLEX organism=Acanthamoeba polyphaga mimivirus DNA sequence DC(D14):DG(C13) DG(D15):DC(C12) DT(D16):DA(C11) DC(D17):DG(C10) DC(D18):DG(C9) DA(D19):DT(C8) 3DR(D20):DC(C7) DG(D21):DC(C6) DT(D22):DA(C5) DC(D23):DG(C4) DT(D24):DA(C3) DA(D25):DT(C2) DC(D26):DG(C1) chainA ( 83) LEU84 0 0 0 0 0 0 0 14 0 0 0 0 0 (112) MET113 0 0 0 0 0 6 0 0 0 0 0 0 0 (113) ARG114 0 0 0 0 0 80 14 0 0 0 0 0 0 (115) PHE116 0 0 0 0 0 0 12 41 0 0 0 0 0 (271) SER272 0 0 0 0 0 0 0 0 0 0 7 11 0 (273) LYS274 0 0 0 0 0 0 0 0 3 6 0 0 0 (274) ASN275 0 0 0 0 0 0 0 0 4 10 3 0 0 (276) ARG277 0 0 0 0 0 0 0 3 2 0 0 0 0 prot.sequence pegpevaltadilekyfkgktleyidfisgrysksepegyddfianlplkvsnvdtkgkflwfelfdpndksnkwyiwntfgLtgmwslfeakytravlsfdnelmayfsdMRnFgtfkfsnsekelkrklnelgpdflknddidiskikkykqpivallmdqkkigsglgnylvaeilyrakidphklgsnltdqeienlwywikyetklaydsnhigymvnlenesskigrknyhpnihptekefdflvyrkkkdpngnkviadkiigSgKNkRttywapaiqkle >3a4k_AB: title=CRYSTAL STRUCTURAL ANALYSIS OF HINDIII RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNA AND DIVALENT CATIONS AT 2.17 ANGSTROM RESOLUTION organism=Haemophilus influenzae DNA sequence DG(E1):DC(J8) DC(E2):DG(J7) DC(E3):DG(J6) DA(E4):DT(J5) DA(F1):DT(J4) DG(F2):DC(J3) DC(F3):DG(J2) DT(F4):DA(J1) DT(F5):DA(I4) DG(F6):DC(I3) DG(F7):DC(I2) DC(F8):DG(I1) chainA ( 55) SER56 0 0 0 4 5 2 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 1 0 0 0 0 0 0 0 ( 60) LYS61 0 0 1 5 1 0 0 0 0 0 0 0 (114) ARG116 0 0 0 0 0 0 10 4 0 0 0 0 (115) THR117 0 0 0 0 0 0 0 4 4 0 0 0 (116) ALA118 0 0 0 0 0 0 0 4 3 4 0 0 (118) ASN120 0 0 0 0 0 0 2 8 8 4 0 0 (120) LYS122 0 0 0 0 0 1 7 0 0 0 0 0 (121) ASP123 0 0 0 0 0 1 9 0 0 0 0 0 (123) LYS125 0 0 0 1 0 0 0 0 0 0 0 0 chainB ( 55) SER56 0 0 0 0 0 0 2 5 4 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 2 5 1 0 0 ( 86) GLN87 0 0 0 0 0 0 0 0 0 0 1 1 (114) ARG116 0 0 0 0 4 10 0 0 0 0 0 0 (115) THR117 0 0 0 4 4 0 0 0 0 0 0 0 (116) ALA118 0 0 5 3 4 0 0 0 0 0 0 0 (118) ASN120 0 0 4 7 8 2 0 0 0 0 0 0 (120) LYS122 0 0 0 0 1 7 2 0 0 0 0 0 (121) ASP123 0 0 0 0 0 9 1 0 0 0 0 0 (123) LYS125 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl/ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleQgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3a4k_B: title=CRYSTAL STRUCTURAL ANALYSIS OF HINDIII RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNA AND DIVALENT CATIONS AT 2.17 ANGSTROM RESOLUTION organism=Haemophilus influenzae DNA sequence DG(E1):DC(J8) DC(E2):DG(J7) DC(E3):DG(J6) DA(E4):DT(J5) DA(F1):DT(J4) DG(F2):DC(J3) DC(F3):DG(J2) DT(F4):DA(J1) DT(F5):DA(I4) DG(F6):DC(I3) DG(F7):DC(I2) DC(F8):DG(I1) chainB ( 55) SER56 0 0 0 0 0 0 2 5 4 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 2 5 1 0 0 ( 86) GLN87 0 0 0 0 0 0 0 0 0 0 1 1 (114) ARG116 0 0 0 0 4 10 0 0 0 0 0 0 (115) THR117 0 0 0 4 4 0 0 0 0 0 0 0 (116) ALA118 0 0 5 3 4 0 0 0 0 0 0 0 (118) ASN120 0 0 4 7 8 2 0 0 0 0 0 0 (120) LYS122 0 0 0 0 1 7 2 0 0 0 0 0 (121) ASP123 0 0 0 0 0 9 1 0 0 0 0 0 (123) LYS125 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleQgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3a4k_CD: title=CRYSTAL STRUCTURAL ANALYSIS OF HINDIII RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNA AND DIVALENT CATIONS AT 2.17 ANGSTROM RESOLUTION organism=Haemophilus influenzae DNA sequence DG(G1):DC(L8) DC(G2):DG(L7) DC(G3):DG(L6) DA(G4):DT(L5) DA(H1):DT(L4) DG(H2):DC(L3) DC(H3):DG(L2) DT(H4):DA(L1) DT(H5):DA(K4) DG(H6):DC(K3) DG(H7):DC(K2) DC(H8):DG(K1) chainC ( 55) SER56 0 0 0 4 6 2 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 1 0 0 0 0 0 0 0 ( 60) LYS61 0 0 1 5 1 0 0 0 0 0 0 0 (114) ARG116 0 0 0 0 0 0 9 4 0 0 0 0 (115) THR117 0 0 0 0 0 0 0 4 4 0 0 0 (116) ALA118 0 0 0 0 0 0 0 4 3 4 0 0 (118) ASN120 0 0 0 0 0 0 2 8 7 4 0 0 (120) LYS122 0 0 0 0 0 1 7 0 0 0 0 0 (121) ASP123 0 0 0 0 0 1 9 0 0 0 0 0 (123) LYS125 0 0 0 1 0 0 0 0 0 0 0 0 chainD ( 55) SER56 0 0 0 0 0 0 2 8 4 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 1 4 1 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 1 0 (115) ARG116 0 0 0 0 4 9 0 0 0 0 0 0 (116) THR117 0 0 0 4 4 0 0 0 0 0 0 0 (117) ALA118 0 0 5 3 4 0 0 0 0 0 0 0 (119) ASN120 0 0 4 8 8 1 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 7 2 0 0 0 0 0 (122) ASP123 0 0 0 0 0 9 1 0 0 0 0 0 (124) LYS125 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl/ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3a5t_AB:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF MAFG-DNA COMPLEX organism=Mus musculus DNA sequence DG(D1):DC(C15) DT(D2):DA(C14) DG(D3):DC(C13) DC(D4):DG(C12) DT(D5):DA(C11) DG(D6):DC(C10) DA(D7):DT(C9) DC(D8):DG(C8) DT(D9):DA(C7) DC(D10):DG(C6) DA(D11):DT(C5) DT(D12):DA(C4) DC(D13):DG(C3) DA(D14):DT(C2) DG(D15):DC(C1) chainA ( 39) ARG57 0 0 0 0 0 0 0 0 0 0 0 5 12 8 0 ( 43) ASN61 0 0 0 0 0 0 0 0 0 1 3 3 0 0 0 ( 46) TYR64 0 0 0 0 0 0 0 0 0 0 1 6 8 0 0 ( 47) ALA65 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 ( 50) CYS68 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 51) ARG69 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 chainB ( 38) ARG57 0 11 13 7 0 0 0 0 0 0 0 0 0 0 0 ( 42) ASN61 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 ( 45) TYR64 0 0 9 7 1 0 0 0 0 0 0 0 0 0 0 ( 46) ALA65 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 49) CYS68 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 50) ARG69 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 prot.sequence hmgtsltdeelvtmsvrelnqhlrglskeeiiqlkqrrRtlkNrgYAasCRvkrvtqkeelekqkaelqqeveklasenasmkleldalrsky/mgtsltdeelvtmsvrelnqhlrglskeeiiqlkqrrRtlkNrgYAasCRvkrvtqkeelekqkaelqqeveklasenasmkleldalrskye >3a5t_B:A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=CRYSTAL STRUCTURE OF MAFG-DNA COMPLEX organism=Mus musculus DNA sequence DC(C1):DG(D15) DT(C2):DA(D14) DG(C3):DC(D13) DA(C4):DT(D12) DT(C5):DA(D11) DG(C6):DC(D10) DA(C7):DT(D9) DG(C8):DC(D8) DT(C9):DA(D7) DC(C10):DG(D6) DA(C11):DT(D5) DG(C12):DC(D4) DC(C13):DG(D3) DA(C14):DT(D2) DC(C15):DG(D1) chainB ( 38) ARG57 0 0 0 0 0 0 0 0 0 0 0 7 13 11 0 ( 42) ASN61 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 ( 45) TYR64 0 0 0 0 0 0 0 0 0 0 1 7 9 0 0 ( 46) ALA65 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 49) CYS68 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 50) ARG69 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 prot.sequence mgtsltdeelvtmsvrelnqhlrglskeeiiqlkqrrRtlkNrgYAasCRvkrvtqkeelekqkaelqqeveklasenasmkleldalrskye >3a5u_AB:Nucleic_acid-binding_proteins; title=PROMISCUITY AND SPECIFICITY IN DNA BINDING TO SSB: INSIGHTS FROM THE STRUCTURE OF THE MYCOBACTERIUM SMEGMATIS SSB-SSDNA COMPLEX organism=Mycobacterium smegmatis DNA sequence DC(C1) DC(C2) DC(C3) DC(C4) DC(C5) DC(C6) DC(C7) DC(C8) DC(C9) DC(C10) DC(C11) DC(C12) DC(C13) DC(C14) DC(C15) DC(C16) DC(C17) DC(C18) DC(C19) DC(C20) DC(C21) DC(C22) DC(C23) DC(C24) DC(C25) DC(C26) DC(C27) DC(C28) DC(C29) DC(C30) DC(C31) chainA ( 14) THR14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 ( 15) ALA15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 18) GLU18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 32) THR32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 55) LEU55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 56) ARG56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 60) TRP60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 3 0 0 0 0 0 ( 61) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 ( 85) GLN85 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 88) PHE88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 ( 89) THR90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 90) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 96) THR97 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) VAL99 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) GLU100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (104) GLU105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 chainB ( 16) ASP16 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLU18 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU19 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG20 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA26 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ALA27 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) PHE54 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG56 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG61 0 0 0 0 13 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) GLU65 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) GLU69 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) GLN85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 81) ARG86 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) VAL98 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) VAL99 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (104) ARG111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence magdttitvvgnlTAdpElrftpsgaavanfTvastprmfdrqsgewkdgealfLRcniWReaaenvaesltrgsrvivtgrlkQRsFTRegekrTvVEvevDEigpslryatakvnk/magdttitvvgnltaDpELRftpsgAAvanftvastpRmgewkdgealFlRcniwReaaEnvaEsltRgsrvivtgrlkQRsfetrekrtVVevevdeigpslRyatakvnk >3a5u_B:Nucleic_acid-binding_proteins; title=PROMISCUITY AND SPECIFICITY IN DNA BINDING TO SSB: INSIGHTS FROM THE STRUCTURE OF THE MYCOBACTERIUM SMEGMATIS SSB-SSDNA COMPLEX organism=Mycobacterium smegmatis DNA sequence DC(C1) DC(C2) DC(C3) DC(C4) DC(C5) DC(C6) DC(C7) DC(C8) DC(C9) DC(C10) DC(C11) DC(C12) DC(C13) DC(C14) DC(C15) DC(C16) DC(C17) DC(C18) DC(C19) DC(C20) DC(C21) DC(C22) DC(C23) DC(C24) DC(C25) DC(C26) DC(C27) DC(C28) DC(C29) DC(C30) DC(C31) chainB ( 16) ASP16 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLU18 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU19 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG20 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA26 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ALA27 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) PHE54 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG56 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG61 0 0 0 0 13 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) GLU65 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) GLU69 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) GLN85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 81) ARG86 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) VAL98 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) VAL99 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (104) ARG111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence magdttitvvgnltaDpELRftpsgAAvanftvastpRmgewkdgealFlRcniwReaaEnvaEsltRgsrvivtgrlkQRsfetrekrtVVevevdeigpslRyatakvnk >3a6n_A:Histone-fold; title=THE NUCLEOSOME CONTAINING A TESTIS-SPECIFIC HISTONE VARIANT, HUMAN H3T organism=? DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlmreiaqdfktdlRfqssavmalqeacesylvglfedtnlcvihakrvtimpkdiqlarrirger >3a6n_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE NUCLEOSOME CONTAINING A TESTIS-SPECIFIC HISTONE VARIANT, HUMAN H3T organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 9) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlmreiaqdfktdlRfqssavmalqeacesylvglfedtnlcvihakrvtimpkdiqlarrirger/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/pHRYrpgtvalreirryqkstellirkLpfqrlmreiaqdfktdlRfqssavmalqeacesylvglfedtnlcvihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/srkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3aaf_AB:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF WRN RQC DOMAIN BOUND TO DOUBLE-STRANDED DNA organism=Homo sapiens DNA sequence DC(C2):DG(D13) DC(C3):DG(D12) DC(C4):DG(D11) DT(C5):DA(D10) DA(C6):DT(D9) DA(C7):DT(D8) DT(C8):DA(D7) DT(C9):DA(D6) DA(C10):DT(D5) DG(C11):DC(D4) DG(C12):DC(D3) DG(C13):DC(D2) chainA ( 82) PHE1037 31 0 0 0 0 0 0 0 0 0 0 0 ( 83) MET1038 10 0 0 0 0 0 0 0 0 0 0 0 chainB ( 82) PHE1037 0 0 0 0 0 0 0 0 0 0 0 29 ( 83) MET1038 0 0 0 0 0 0 0 0 0 0 0 11 prot.sequence swdfgpqafkllsavdilgekfgiglpilflrgsnsqrladqyrrhslfgtgkdqteswwkafsrqlitegflvevsrynkFMkicaltkkgrnwlhkantesqslilq/swdfgpqafkllsavdilgekfgiglpilflrgsnsqrladqyrrhslfgtgkdqteswwkafsrqlitegflvevsrynkFMkicaltkkgrnwlhkantesqslilq >3aaf_B:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF WRN RQC DOMAIN BOUND TO DOUBLE-STRANDED DNA organism=Homo sapiens DNA sequence DC(C2):DG(D13) DC(C3):DG(D12) DC(C4):DG(D11) DT(C5):DA(D10) DA(C6):DT(D9) DA(C7):DT(D8) DT(C8):DA(D7) DT(C9):DA(D6) DA(C10):DT(D5) DG(C11):DC(D4) DG(C12):DC(D3) DG(C13):DC(D2) chainB ( 82) PHE1037 0 0 0 0 0 0 0 0 0 0 0 29 ( 83) MET1038 0 0 0 0 0 0 0 0 0 0 0 11 prot.sequence swdfgpqafkllsavdilgekfgiglpilflrgsnsqrladqyrrhslfgtgkdqteswwkafsrqlitegflvevsrynkFMkicaltkkgrnwlhkantesqslilq >3afa_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE HUMAN NUCLEOSOME STRUCTURE organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 63) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiQtavrlllpgelakhavsegtkavtkytsa >3afa_C:Histone-fold; title=THE HUMAN NUCLEOSOME STRUCTURE organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >3an2_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE STRUCTURE OF THE CENTROMERIC NUCLEOSOME CONTAINING CENP-A organism=HOMO SAPIENS DNA sequence DA(I-60):DT(J60) DA(I-59):DT(J59) DC(I-58):DG(J58) DG(I-57):DC(J57) DG(I-56):DC(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DT(I-52):DA(J52) DT(I-51):DA(J51) DC(I-50):DG(J50) DT(I-49):DA(J49) DT(I-48):DA(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DT(I-45):DA(J45) DT(I-44):DA(J44) DT(I-43):DA(J43) DC(I-42):DG(J42) DA(I-41):DT(J41) DT(I-40):DA(J40) DG(I-39):DC(J39) DC(I-38):DG(J38) DT(I-37):DA(J37) DA(I-36):DT(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DC(I-33):DG(J33) DA(I-32):DT(J32) DG(I-31):DC(J31) DA(I-30):DT(J30) DA(I-29):DT(J29) DG(I-28):DC(J28) DA(I-27):DT(J27) DA(I-26):DT(J26) DT(I-25):DA(J25) DT(I-24):DA(J24) DC(I-23):DG(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DG(I-19):DC(J19) DT(I-18):DA(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DC(I-15):DG(J15) DT(I-14):DA(J14) DT(I-13):DA(J13) DC(I-12):DG(J12) DT(I-11):DA(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DG(I-8):DC(J8) DT(I-7):DA(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DT(I-1):DA(J1) DA(I0):DA(J0) DA(I1):DT(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DA(I7):DT(J-7) DC(I8):DG(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DA(I11):DT(J-11) DG(I12):DC(J-12) DA(I13):DT(J-13) DA(I14):DT(J-14) DG(I15):DC(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DA(I18):DT(J-18) DC(I19):DG(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DG(I23):DC(J-23) DA(I24):DT(J-24) DA(I25):DT(J-25) DT(I26):DA(J-26) DT(I27):DA(J-27) DC(I28):DG(J-28) DT(I29):DA(J-29) DT(I30):DA(J-30) DC(I31):DG(J-31) DT(I32):DA(J-32) DG(I33):DC(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DT(I36):DA(J-36) DA(I37):DT(J-37) DG(I38):DC(J-38) DC(I39):DG(J-39) DA(I40):DT(J-40) DT(I41):DA(J-41) DG(I42):DC(J-42) DA(I43):DT(J-43) DA(I44):DT(J-44) DA(I45):DT(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DA(I48):DT(J-48) DA(I49):DT(J-49) DG(I50):DC(J-50) DA(I51):DT(J-51) DA(I52):DT(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DC(I56):DG(J-56) DC(I57):DG(J-57) DG(I58):DC(J-58) DT(I59):DA(J-59) DT(I60):DA(J-60) chainA chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE chainF ( 8) LYS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 5) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirg/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrKgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniq/esysiyvykvlkqvhpdtgiSskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/lkeirklqksthllirklpfSrlareicvkffnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgl/dniqgitKpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraGlqfpvgrvhrllrKgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqav/esysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkRstitsreiqtavrlllpgelakhavsegtkavtkytsa >3an2_B:Histone-fold; title=THE STRUCTURE OF THE CENTROMERIC NUCLEOSOME CONTAINING CENP-A organism=? DNA sequence DA(J-60):DT(I60) DA(J-59):DT(I59) DC(J-58):DG(I58) DG(J-57):DC(I57) DG(J-56):DC(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DT(J-52):DA(I52) DT(J-51):DA(I51) DC(J-50):DG(I50) DT(J-49):DA(I49) DT(J-48):DA(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DT(J-45):DA(I45) DT(J-44):DA(I44) DT(J-43):DA(I43) DC(J-42):DG(I42) DA(J-41):DT(I41) DT(J-40):DA(I40) DG(J-39):DC(I39) DC(J-38):DG(I38) DT(J-37):DA(I37) DA(J-36):DT(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DC(J-33):DG(I33) DA(J-32):DT(I32) DG(J-31):DC(I31) DA(J-30):DT(I30) DA(J-29):DT(I29) DG(J-28):DC(I28) DA(J-27):DT(I27) DA(J-26):DT(I26) DT(J-25):DA(I25) DT(J-24):DA(I24) DC(J-23):DG(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DG(J-19):DC(I19) DT(J-18):DA(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DC(J-15):DG(I15) DT(J-14):DA(I14) DT(J-13):DA(I13) DC(J-12):DG(I12) DT(J-11):DA(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DG(J-8):DC(I8) DT(J-7):DA(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DT(J-1):DA(I1) DA(J0):DA(I0) DA(J1):DT(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DA(J7):DT(I-7) DC(J8):DG(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DA(J11):DT(I-11) DG(J12):DC(I-12) DA(J13):DT(I-13) DA(J14):DT(I-14) DG(J15):DC(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DA(J18):DT(I-18) DC(J19):DG(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DG(J23):DC(I-23) DA(J24):DT(I-24) DA(J25):DT(I-25) DT(J26):DA(I-26) DT(J27):DA(I-27) DC(J28):DG(I-28) DT(J29):DA(I-29) DT(J30):DA(I-30) DC(J31):DG(I-31) DT(J32):DA(I-32) DG(J33):DC(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DT(J36):DA(I-36) DA(J37):DT(I-37) DG(J38):DC(I-38) DC(J39):DG(I-39) DA(J40):DT(I-40) DT(J41):DA(I-41) DG(J42):DC(I-42) DA(J43):DT(I-43) DA(J44):DT(I-44) DA(J45):DT(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DA(J48):DT(I-48) DA(J49):DT(I-49) DG(J50):DC(I-50) DA(J51):DT(I-51) DA(J52):DT(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DC(J56):DG(I-56) DC(J57):DG(I-57) DG(J58):DC(I-58) DT(J59):DA(I-59) DT(J60):DA(I-60) chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >3aoh_CD: title=RNA POLYMERASE-GFH1 COMPLEX (CRYSTAL TYPE 1) organism=THERMUS THERMOPHILUS DNA sequence DC(P19) DC(P20) DG(P21) DC(P22) DC(P23) DG(P24) chainC chainD (570) ALA705 0 1 0 0 0 0 (571) PRO706 5 0 0 0 0 0 (953) THR1088 1 0 0 0 0 0 (956) SER1091 6 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdif/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTadSgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqlttqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieear >3aoi_CD: title=RNA POLYMERASE-GFH1 COMPLEX (CRYSTAL TYPE 2) organism=THERMUS THERMOPHILUS DNA sequence DC(P15) DC(P16) DG(P17) DC(P18) DC(P19) DG(P20) DC(P21) chainC chainD (536) PRO706 4 0 0 0 0 0 0 (921) SER1091 5 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdif/mkkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdvrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadSgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltditqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieear >3auo_A:PHP_domain-like;Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;RuvA_domain_2-like; title=DNA POLYMERASE X FROM THERMUS THERMOPHILUS HB8 TERNARY COMPLEX WITH 1- NT GAPPED DNA AND DDGTP organism=? DNA sequence DT(D27) DG(D26) DA(D25) DC(D24) DT(D23) DT(D22) DT(D21) DT(D20) DG(D19) DT(D18) DC(D17) DA(D16) DG(D15) DC(D14) DC(D13) DC(D12) DG(D1):DC(D12) DC(D2):DG(D11) DC(D3):DG(D10) DG(D4):DC(D9) DT(D5) DT(D6) DT(D7) DT(D8) chainA ( 23) ASN23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 ( 25) PHE25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 45 0 0 0 0 0 0 0 ( 26) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 ( 28) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (139) LYS139 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) LYS263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (267) ILE267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (270) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 (275) GLU275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence mrnqelarifeeiglmseflgdNpFRvRayhqaartlydldtpieeiaekgkealmelpgvgpdlaekileflrtgkvrkheelsrkvprgvlevmevpgvgpktarllyeglgidsleklkaaldrgdltrlkgfgpKraerireglalaqaagkrrplgavlslarslleairalpgveraelcgsarrykdtvgdldflvasregeravegfvrlpqvkevyakgkeratvflknglqvdlrvvppesygaglqyltgsKahsIrlRalaqEkglklsEygvfrgekriageteeevyaalglpwippplredqgeveaalegrlpkllelpqvkgdlqvhstysdgqntleelweaaktmgyrylavtdhspavrvaggpspeealkrvgeirrfnethgppyllagaevdihpdgtldypdwvlreldlvlvsvhsrfnlpkadqtkrllkalenpfvhvlahptarllgrrapieadweavfqkakekgvaveidgyydrmdlpddlarmaygmglwislstdahqtdhlrfmelavgtaqrawigpervlntldyedllswlkar >3av1_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE HUMAN NUCLEOSOME STRUCTURE CONTAINING THE HISTONE VARIANT H3.2 organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 1) HIS39 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence HRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3av1_B:Histone-fold; title=THE HUMAN NUCLEOSOME STRUCTURE CONTAINING THE HISTONE VARIANT H3.2 organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >3av2_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE HUMAN NUCLEOSOME STRUCTURE CONTAINING THE HISTONE VARIANT H3.3 organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 9) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 63) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiQtavrlllpgelakhavsegtkavtkytsa >3av2_E:Histone-fold; title=THE HUMAN NUCLEOSOME STRUCTURE CONTAINING THE HISTONE VARIANT H3.3 organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainE ( 2) HIS39 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera >3ayw_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H3K56Q MUTATION organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 14) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 62) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqqstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqqstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/rkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreIqtavrlllpgelakhavsegtkavtkytsa >3ayw_D:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H3K56Q MUTATION organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainD ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3aze_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H3K64Q MUTATION organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) LYS37 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) HIS39 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 63) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRYrpgtvalreirryqkstellirqLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/KpHRYrpgtvalreirryqkstellirqLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiQtavrlllpgelakhavsegtkavtkytsa >3aze_B:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H3K64Q MUTATION organism=? DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >3azf_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H3K79Q MUTATION organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 9) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 14) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfqtdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfqtdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >3azf_E:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H3K79Q MUTATION organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainE ( 3) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfqtdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >3azg_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H3K115Q MUTATION organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 9) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihaqrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihaqrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3azg_D:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H3K115Q MUTATION organism=? DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainD ( 9) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3azh_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H3K122Q MUTATION organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) LYS37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 15) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpqdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kRsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/KpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpqdiqlarrirgera/hrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ktrssraglqfpvgRvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/Rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3azh_C:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H3K122Q MUTATION organism=? DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >3azi_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H4K31Q MUTATION organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/niqgitqpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitqpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/srkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3azj_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H4K44Q MUTATION organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/dniqgitkpairrlarrggvqRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpn/RkrsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rkvlrdniqgitkpairrlarrggvqRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ktrssraglqfpvgrvhrllrkgnysErvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpn/srkesysiyvykvlkqvhpdtgisskAmgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3azj_F:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H4K44Q MUTATION organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rkvlrdniqgitkpairrlarrggvqRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >3azk_ABCDEFGH:Histone-fold;PH_domain-like; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H4K59Q MUTATION organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 14) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlqvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlqvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3azk_F:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H4K59Q MUTATION organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainF ( 14) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlqvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >3azl_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H4K77Q MUTATION organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 16) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehaqrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehaqrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/srkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3azm_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H4K79Q MUTATION organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 63) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrqtvtamdvvyalkrqgrtlygfg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrqtvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiQtavrlllpgelakhavsegtkavtkytsa >3azm_E:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H4K79Q MUTATION organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >3azn_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H4K91Q MUTATION organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalqrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalqrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3azn_C:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE CONTAINING H4K91Q MUTATION organism=? DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >3b6f_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE TREATED WITH CISPLATIN organism=XENOPUS LAEVIS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 7) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 11 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 9) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 10) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 35) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) LYS75 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ggvkkpHRYrPgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/dgKkRrktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/atggvkkpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/KaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkKtriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkte/kkrRKtRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3b6f_H:Histone-fold; title=NUCLEOSOME CORE PARTICLE TREATED WITH CISPLATIN organism=? DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainH ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkrRKtRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3b6g_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE TREATED WITH OXALIPLATIN organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainA ( 8) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 3) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 9 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 10) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) TYR41 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ggvkkphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrKgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/dgKkRrktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/atggvkkphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Kaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkte/kkrRKtRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3b6g_D:Histone-fold; title=NUCLEOSOME CORE PARTICLE TREATED WITH OXALIPLATIN organism=? DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainD ( 3) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 9 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dgKkRrktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3bam_A:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA AND MANGANESE IONS (POST-REACTIVE COMPLEX) organism=Bacillus amyloliquefaciens DNA sequence DT(C3):DA(E6) DG(C4):DC(E5) DG(C5):DC(E4) DA(C6):DT(E3) DT(C7):DA(E2) DC(C8):DG(E1) DC(C9):DG(D4) DA(C10):DT(D3) DT(C11):DA(D2) chainA (116) ASN116 0 0 7 7 1 0 0 0 0 (122) ARG122 0 0 0 0 0 2 6 0 0 (153) THR153 0 0 0 2 0 0 0 0 0 (154) ASP154 0 4 5 0 0 0 0 0 0 (155) ARG155 23 17 7 0 0 0 0 0 0 (156) VAL156 0 0 0 1 0 0 0 0 0 (196) ASP196 0 0 0 0 5 6 1 0 0 (198) MET198 0 0 2 4 2 0 0 0 0 prot.sequence mevekefitdeakellskdkliqqaynevktsicspiwpatsktftinntekncngvvpikelcytlledtynwyrekpldilklekkkggpidvykefienselkrvgmefetgNissahRsmnklllglkhgeidlaiilmpikqlayylTDRVtnfeelepyfeltegqpfifigfnaeaynsnvplipkgsDgMskrsikkw >3bam_AB:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA AND MANGANESE IONS (POST-REACTIVE COMPLEX) organism=Bacillus amyloliquefaciens DNA sequence DA(D2):DT(C11) DT(D3):DA(C10) DG(D4):DC(C9) DG(E1):DC(C8) DA(E2):DT(C7) DT(E3):DA(C6) DC(E4):DG(C5) DC(E5):DG(C4) DA(E6):DT(C3) chainA (116) ASN116 0 0 0 0 1 7 7 0 0 (122) ARG122 0 0 6 2 0 0 0 0 0 (153) THR153 0 0 0 0 0 2 0 0 0 (154) ASP154 0 0 0 0 0 0 5 4 0 (155) ARG155 0 0 0 0 0 0 7 17 23 (156) VAL156 0 0 0 0 0 1 0 0 0 (196) ASP196 0 0 1 6 5 0 0 0 0 (198) MET198 0 0 0 0 2 4 2 0 0 chainB (116) ASN116 0 0 0 5 8 0 0 0 0 (122) ARG122 0 0 0 0 0 0 2 5 0 (153) THR153 0 0 0 0 4 0 0 0 0 (154) ASP154 0 0 5 5 0 0 0 0 0 (155) ARG155 0 23 20 6 0 0 0 0 0 prot.sequence mevekefitdeakellskdkliqqaynevktsicspiwpatsktftinntekncngvvpikelcytlledtynwyrekpldilklekkkggpidvykefienselkrvgmefetgNissahRsmnklllglkhgeidlaiilmpikqlayylTDRVtnfeelepyfeltegqpfifigfnaeaynsnvplipkgsDgMskrsikkw/mevekefitdeakellskdkliqqaynevktsicspiwpatsktftinntekncngvvpikelcytlledtynwyrekpldilklekkkggpidvykefienselkrvgmefetgNiSsahRsmnklllglkhgeidlaiilmpikqlayylTDRvtnfeelepyfeltegqpfifigfnaeaynsnvplipkgsdgmskrsikkwkdk >3bdn_A:LexA/Signal_peptidase;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR organism=Enterobacteria phage lambda DNA sequence DA(D24):DT(C18) DT(D25):DA(C17) DC(D26):DG(C16) DA(D27):DT(C15) DC(D28):DG(C14) DC(D29):DG(C13) DC(D31):DG(C11) DC(D32):DG(C10) DA(D33):DT(C9) DG(D34):DC(C8) DT(D35):DA(C7) DG(D36):DC(C6) DG(D37):DC(C5) DA(D39):DT(C3) DT(D40):DA(C2) chainA ( 33) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 34) GLU34 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 ( 45) SER45 0 0 0 0 0 0 0 0 0 0 4 11 8 0 0 ( 55) ASN55 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 prot.sequence stkkkpltqeqledarrlkaiyekkknelglsQEsvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavsmqpslrseyeypvfshvqagmfspelrtftkgdaerwvsttkkasdsafwlevegnsmtaptgskpsfpdgmlilvdpeqavepgdfciarlggdeftfkklirgsgqvflqplnpqypmipescsvvgkviasqwpeetfg >3bdn_AB:LexA/Signal_peptidase;lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR organism=Enterobacteria phage lambda DNA sequence DA(C2):DT(D40) DT(C3):DA(D39) DC(C5):DG(D37) DC(C6):DG(D36) DA(C7):DT(D35) DC(C8):DG(D34) DT(C9):DA(D33) DG(C10):DC(D32) DG(C11):DC(D31) DG(C13):DC(D29) DG(C14):DC(D28) DT(C15):DA(D27) DG(C16):DC(D26) DA(C17):DT(D25) DT(C18):DA(D24) chainA ( 33) GLN33 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) GLU34 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN44 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) SER45 0 0 8 11 4 0 0 0 0 0 0 0 0 0 0 ( 55) ASN55 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 chainB ( 2) THR2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 33) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 45) SER45 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 55) ASN55 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 prot.sequence stkkkpltqeqledarrlkaiyekkknelglsQEsvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavsmqpslrseyeypvfshvqagmfspelrtftkgdaerwvsttkkasdsafwlevegnsmtaptgskpsfpdgmlilvdpeqavepgdfciarlggdeftfkklirgsgqvflqplnpqypmipescsvvgkviasqwpeetfg/sTkkkpltqeqledarrlkaiyekkknelglsQesvadkmgmgqSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavsmqpslrseyeypvfshvqagmfspelrtftkgdaerwvsttkkasdsafwlevegnsmtaptgskpsfpdgmlilvdpeqavepgdfciarlggdeftfkklirgsgqvflqplnpqypmipescsvvgkviasqwpeetfg >3bdp_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA POLYMERASE I/DNA COMPLEX organism=Geobacillus stearothermophilus DNA sequence DA(T18):2DT(P16) DG(T19):DC(P15) DC(T20):DG(P14) DA(T21):DT(P13) DT(T22):DA(P12) DC(T23):DG(P11) DA(T24):DT(P10) DT(T25):DA(P9) DG(T26):DC(P8) DC(T27):DG(P7) chainA (286) LYS582 0 0 0 6 2 0 0 0 0 0 (291) TYR587 0 0 1 0 0 0 0 0 0 0 (319) ARG615 8 1 0 0 0 0 0 0 0 0 (326) ASN622 0 0 1 0 0 0 0 0 0 0 (329) ASN625 0 1 11 2 0 0 0 0 0 0 (414) PHE710 4 0 0 0 0 0 0 0 0 0 (418) TYR714 25 0 0 0 0 0 0 0 0 0 (501) GLN797 1 0 0 0 0 0 0 0 0 0 prot.sequence aamaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvraaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3bi3_A:Clavaminate_synthase-like; title=X-RAY STRUCTURE OF ALKB PROTEIN BOUND TO DSDNA CONTAINING 1MEA/A WITH COFACTORS organism=Escherichia coli K12 DNA sequence DA(B2):DT(C13) DG(B3):DC(C12) DG(B4):DC(C11) DT(B5):DA(C10) DA(B6):DT(C9) DA(B7):DT(C8) DA(B9):DA(C7) DC(B11):DT(C6) DG(B12):DG(C5) DT(B13):DG(C4) chainA (117) CYS129 0 0 0 0 0 0 4 0 0 0 (149) ARG161 0 0 0 0 0 0 3 9 13 13 prot.sequence eplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdkdepdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqag >3bie_A:Clavaminate_synthase-like; title=X-RAY STRUCTURE OF E COLI ALKB BOUND TO DSDNA CONTAINING 1MEA/T WITH MN AND 2KG organism=Escherichia coli K12 DNA sequence DG(C4):DT(B13) DG(C5):DG(B12) DT(C6):DC(B11) DT(C7):DA(B9) DT(C8):DA(B7) DT(C9):DA(B6) DA(C10):DT(B5) DC(C11):DG(B4) DC(C12):DG(B3) DT(C13):DA(B2) chainA (117) CYS129 0 0 0 4 0 0 0 0 0 0 (149) ARG161 14 13 8 2 0 0 0 0 0 0 prot.sequence eplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdkdepdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagk >3bjy_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CATALYTIC CORE OF REV1 IN COMPLEX WITH DNA (MODIFIED TEMPLATE GUANINE) AND INCOMING NUCLEOTIDE organism=Saccharomyces cerevisiae DNA sequence DT(T6):DA(P11) DA(T7):DT(P10) DG(T8):DC(P9) DG(T9):DC(P8) DG(T10):DC(P7) DG(T11):DC(P6) DA(T12):DT(P5) DG(T13):DC(P4) DG(T14):DC(P3) DA(T15):DT(P2) DT(T16):DA(P1) chainA ( 25) SER329 3 0 0 0 0 0 0 0 0 0 0 (316) ASP626 9 0 0 0 0 0 0 0 0 0 0 prot.sequence krivacddpdfltsyfahsrlhhlSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdtlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfsrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdv >3bkz_A:Clavaminate_synthase-like; title=X-RAY STRUCTURE OF E COLI ALKB CROSSLINKED TO DSDNA IN THE ACTIVE SITE organism=Escherichia coli K12 DNA sequence DA(B2):DT(C13) DG(B3):DC(C12) DG(B4):DC(C11) DT(B5):DA(C10) DA(B6):DT(C9) DA(B7):DT(C8) DA(B9):DA(C7) DT(B10):DT(C6) DC(B11):DA(C5) DG(B12):DG(C4) DT(B13):DC(C3) chainA (114) LYS127 0 0 0 0 0 0 0 1 0 0 0 (116) SER129 0 0 0 0 0 0 4 2 0 0 0 (148) ARG161 0 0 0 0 0 1 3 2 3 1 0 prot.sequence plaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaKlSlhqdkcepdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagk >3bm3_A:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE PSPGI-SUBSTRATE DNA COMPLEX organism=Pyrococcus sp. GI-H DNA sequence DG(D-5):DC(C5) DT(D-4):DA(C4) DA(D-3):DT(C3) DC(D-2):DG(C2) DC(D-1):DG(C1) DG(D1):DC(C-1) DG(D2):DC(C-2) DA(D3):DT(C-3) DT(D4):DA(C-4) chainA ( 93) GLN94 0 0 0 0 0 11 28 0 0 ( 96) PHE97 0 0 0 0 8 15 2 0 0 ( 97) SER98 0 0 0 0 0 0 3 4 3 (161) LYS162 0 0 0 0 3 0 0 0 0 (163) ARG164 0 0 4 18 21 0 0 0 0 (164) GLU165 0 0 3 10 8 0 0 0 0 (165) ARG166 0 0 0 0 14 11 0 0 0 prot.sequence vrnlviditkkptqnipptneiieeaitelnvdelldrlfekdesgevitpsriakmleekafeiykeyekqvreaylsagysrekleqsfqQarFSrggkafeiiftkllnkfgiryehdrvikiydyitegekpafiipsvrtflndpssailitvkrKvRERwreavgeaqilrnkfgdeinfwfvgfdeeftiysaiamldngidrvyvidgrydslieeikrisdpnfnedkyiqkirrfsdifddiiqflnkh >3bm3_AB:Restriction_endonuclease-like; title=RESTRICTION ENDONUCLEASE PSPGI-SUBSTRATE DNA COMPLEX organism=Pyrococcus sp. GI-H DNA sequence DA(C-4):DT(D4) DT(C-3):DA(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DG(C1):DC(D-1) DG(C2):DC(D-2) DT(C3):DA(D-3) DA(C4):DT(D-4) DC(C5):DG(D-5) chainA ( 93) GLN94 0 0 28 11 0 0 0 0 0 ( 96) PHE97 0 0 2 15 8 0 0 0 0 ( 97) SER98 3 4 3 0 0 0 0 0 0 (161) LYS162 0 0 0 0 3 0 0 0 0 (163) ARG164 0 0 0 0 21 18 4 0 0 (164) GLU165 0 0 0 0 8 10 3 0 0 (165) ARG166 0 0 0 11 14 0 0 0 0 chainB ( 92) GLN94 0 0 0 0 11 24 0 0 0 ( 95) PHE97 0 0 0 9 16 2 0 0 0 ( 96) SER98 0 0 0 0 0 3 2 0 0 (160) LYS162 0 0 0 3 0 0 0 0 0 (162) ARG164 0 11 18 22 0 0 0 0 0 (163) GLU165 0 3 10 9 0 0 0 0 0 (164) ARG166 0 0 0 14 11 0 0 0 0 prot.sequence vrnlviditkkptqnipptneiieeaitelnvdelldrlfekdesgevitpsriakmleekafeiykeyekqvreaylsagysrekleqsfqQarFSrggkafeiiftkllnkfgiryehdrvikiydyitegekpafiipsvrtflndpssailitvkrKvRERwreavgeaqilrnkfgdeinfwfvgfdeeftiysaiamldngidrvyvidgrydslieeikrisdpnfnedkyiqkirrfsdifddiiqflnkh/rnlviditkkptqnipptneiieeaitelnvdelldrlfekdesgevitpsriakmleekafeiykeyekqvreaylsagysrekleqsfqQarFSrggkafeiiftkllnkfgiryehdrvikiydyitegekpafiipsvrtflndpssailitvkrKvRERwreavgeaqilrnkfgdeinfwfvgfdeeftiysaiamldngidrvyvidgrydslieeikrisdpnfnedkyiqkirrfsdifddiiqflnkh >3bq2_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POST-INSERTION BINARY COMPLEX OF DBH DNA POLYMERASE organism=Sulfolobus acidocaldarius DNA sequence DG(P1):DC(T14) DA(P2):DT(T13) DA(P3):DT(T12) DG(P4):DC(T11) DC(P5):DG(T10) DC(P6):DG(T9) DG(P7):DC(T8) DG(P8):DC(T7) DC(P9):DG(T5) DG(P10):DC(T4) DG(P11):DC(T3) chainA ( 54) ALA57 0 0 0 0 0 0 0 0 0 0 5 prot.sequence mivifvdfdyffaqveevlnpqykgkplvvcvysgtsgavatanyearklgvkAgmpiikamqiapsaiyvpmrkpiyeafsnrimnllnkhadkievasideayldvtnkvegnfengielarkikqeilekekitvtvgvapnkilakiiadkskpnglgvirptevqdflneldideipgigsvlarrlnelgiqklrdilsknynelekitgkakalyllklaqnkysepvenkskiphgryltlpyntrdvkvilpylkkaineaynkvngipmritviaimedldilskgkkfkhgisidnaykvaedllrellvrdkrrnvrrigvkldniiin >3brd_A:DNA-binding_protein_LAG-1_CSL;p53-like_transcription_factors;E_set_domains; title=CSL (LAG-1) BOUND TO DNA WITH LIN-12 RAM PEPTIDE, P212121 organism=CAENORHABDITIS ELEGANS DNA sequence DA(B3):DT(C15) DC(B4):DG(C14) DT(B5):DA(C13) DG(B6):DC(C12) DT(B7):DA(C11) DG(B8):DC(C10) DG(B9):DC(C9) DG(B10):DC(C8) DA(B11):DT(C7) DA(B12):DT(C6) DA(B13):DT(C5) DG(B14):DC(C4) DA(B15):DT(C3) chainA ( 35) TYR229 0 0 0 0 0 0 0 2 10 0 0 0 0 ( 38) GLU232 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 40) ARG234 0 0 0 0 12 13 2 0 0 0 0 0 0 (142) SER367 0 0 0 0 0 0 0 0 2 4 0 0 0 (143) LYS368 0 0 0 0 0 0 3 8 8 2 0 0 0 (146) LYS371 0 0 0 0 0 0 0 0 0 0 1 0 0 (170) SER400 0 0 0 1 2 0 0 0 0 0 0 0 0 (171) GLN401 0 1 6 4 0 0 0 0 0 0 0 0 0 prot.sequence vqsltsdrmidflsnkekyecvisifhakvaqksYgnEkRffcpppciyligqgwklkkdrvaqlyktlqqatelvayigigsdtserqqldfpniydycaaktlyisdsdkrkyfdlnaqffygcgmeiggfvsqrikviSKpsKkktdckylciasgtkvalfnrlrSQtvstrylhvegnafhasstkwgaftihlfddqetdnfavrdgfvyygsvvklvdsvtgialprlrirkvdkqqvildascseepvsqlhkcafqmidnelvylclshdkiiqhqatainehrhqindgaawtiistdkaeyrffeamgqvanpispcpvvgslevdghgeasrvelhgrdfkpnlkvwfgatpvettfrseeslhcsippvsqvrneqthwmftnrttgdvevpislvrddgvvyssgltfsyksl >3brf_A:DNA-binding_protein_LAG-1_CSL;p53-like_transcription_factors;E_set_domains; title=CSL (LAG-1) BOUND TO DNA WITH LIN-12 RAM PEPTIDE, C2221 organism=CAENORHABDITIS ELEGANS DNA sequence DT(C3):DA(B15) DC(C4):DG(B14) DT(C5):DA(B13) DT(C6):DA(B12) DT(C7):DA(B11) DC(C8):DG(B10) DC(C9):DG(B9) DC(C10):DG(B8) DA(C11):DT(B7) DC(C12):DG(B6) DA(C13):DT(B5) DG(C14):DC(B4) DT(C15):DA(B3) chainA ( 33) TYR229 0 0 0 0 10 2 0 0 0 0 0 0 0 ( 36) GLU232 0 0 0 0 0 0 1 0 4 0 0 0 0 ( 38) ARG234 0 0 0 0 0 0 2 13 13 0 0 0 0 (137) SER367 0 0 0 4 2 0 0 0 0 0 0 0 0 (138) LYS368 0 0 0 2 9 8 6 0 0 0 0 0 0 (141) LYS371 0 0 1 0 0 0 0 0 0 0 0 0 0 (166) SER400 0 0 0 0 0 0 0 0 2 1 0 0 0 (167) GLN401 0 0 0 0 0 0 0 0 0 5 9 2 0 prot.sequence sltsdrmidflsnkekyecvisifhakvaqksYgnEkRffcpppciyligqgwklkkdrvaqlyktltelvayigigsdtserqqldfpniydycaaktlyisdsdkrkyfdlnaqffygcgmeiggfvsqrikviSKpsKkkqsdckylciasgtkvalfnrlrSQtvstrylhvegnafhasstkwgaftihlfddeqetdnfavrdgfvyygsvvklvdsvtgialprlrirkvdkqqvildascseepvsqlhkcafqmidnelvylclshdkiiqhqatainehrhqindgaawtiistdkaeyrffeamgqvanpispcpvvgslevdghgeasrvelhgrdfkpnlkvwfgatpvettfrseeslhcsippvsqvrneqthwmftnrttgdvevpislvrddgvvyssgltfsyks >3brg_C:DNA-binding_protein_LAG-1_CSL;p53-like_transcription_factors;E_set_domains; title=CSL (RBP-JK) BOUND TO DNA organism=Mus musculus DNA sequence DT(A3):DA(B15) DC(A4):DG(B14) DT(A5):DA(B13) DT(A6):DA(B12) DT(A7):DA(B11) DC(A8):DG(B10) DC(A9):DG(B9) DC(A10):DG(B8) DA(A11):DT(B7) DC(A12):DG(B6) DA(A13):DT(B5) DG(A14):DC(B4) DT(A15):DA(B3) chainC ( 34) TYR86 0 0 0 0 11 3 0 0 0 0 0 0 0 ( 37) GLU89 0 0 0 0 0 0 1 2 3 0 0 0 0 ( 39) ARG91 0 0 0 0 0 0 1 9 11 0 0 0 0 (139) SER191 0 0 0 3 2 0 0 0 0 0 0 0 0 (140) LYS192 0 0 0 2 9 7 3 0 0 0 0 0 0 (166) ARG220 0 0 0 0 0 0 0 3 9 8 0 0 0 (167) SER221 0 0 0 0 0 0 0 0 0 3 8 1 0 prot.sequence ppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskkklknadlciasgtkvalfnrlRSqtvstrylhveggnfhassqqwgafyihlldddetvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkeqnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlngggdvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgviystsltftytpep >3bs1_A: title=STRUCTURE OF THE STAPHYLOCOCCUS AUREUS AGRA LYTTR DOMAIN BOUND TO DNA REVEALS A BETA FOLD WITH A NOVEL MODE OF BINDING organism=Staphylococcus aureus DNA sequence DT(B2):DA(C16) DT(B3):DA(C15) DA(B4):DT(C14) DA(B5):DT(C13) DC(B6):DG(C12) DA(B7):DT(C11) DG(B8):DC(C10) DT(B9):DA(C9) DT(B10):DA(C8) DA(B11):DT(C7) DA(B12):DT(C6) DG(B13):DC(C5) BRU(B14):DA(C4) DA(B15):BRU(C3) DT(B16):DA(C2) chainA ( 33) SER168 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 34) HIS169 0 0 0 0 0 0 0 0 0 0 17 11 5 3 0 ( 35) ARG170 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 48) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 ( 97) VAL232 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 ( 98) ARG233 0 0 0 2 12 13 0 0 0 0 0 0 0 0 0 prot.sequence mdnsvetielkrgsnsvyvqyddimffesstkSHrliahldnrqiefYgnlkelsqlddrffrchNsfvvnrhniesidskerivyfknkehcyasVRnvkki >3bsu_A:L9_N-domain-like; title=HYBRID-BINDING DOMAIN OF HUMAN RNASE H1 IN COMPLEX WITH 12-MER RNA/DNA organism=Homo sapiens DNA sequence DG(E1) DA(E2) DA(E3) DT(E4) DC(E5) DA(E6) DG(E7) DG(E8) DG(E10) DT(E11) DC(E12) chainA ( 33) PHE58 0 0 0 0 0 0 6 0 0 0 0 prot.sequence hmfyavrrgrktgvfltwnecraqvDrfpaarFkkfatedeawafvrk >3bsu_ABC:L9_N-domain-like; title=HYBRID-BINDING DOMAIN OF HUMAN RNASE H1 IN COMPLEX WITH 12-MER RNA/DNA organism=Homo sapiens DNA sequence DG(E1) DA(E2) DA(E3) DT(E4) DC(E5) DA(E6) DG(E7) DG(E8) DG(E10) DT(E11) DC(E12) chainA ( 33) PHE58 0 0 0 0 0 0 6 0 0 0 0 chainB ( 18) TRP43 0 0 0 0 1 0 0 0 0 0 0 ( 33) PHE58 0 0 0 4 0 0 0 0 0 0 0 chainC ( 32) PHE58 0 0 0 0 0 0 0 0 3 0 0 prot.sequence hmfyavrrgrktgvfltwnecraqvDrfpaarFkkfatedeawafvrk/hmfyavrrgrktgvfltWnecraqvdrfpaarFkkfatedeawafvrk/mfyavrrgrktgvfltwnecraqvDrfpaarFkkfatedeawafvrks >3bsu_FGH:L9_N-domain-like; title=HYBRID-BINDING DOMAIN OF HUMAN RNASE H1 IN COMPLEX WITH 12-MER RNA/DNA organism=Homo sapiens DNA sequence DG(J1) DA(J2) DA(J3) DT(J4) DC(J5) DA(J6) DG(J7) DG(J8) DG(J10) DT(J11) DC(J12) chainF ( 34) PHE58 0 0 0 0 0 0 4 0 0 0 0 chainG ( 35) PHE58 0 0 0 2 0 0 0 0 0 0 0 chainH ( 18) TRP43 0 0 0 0 0 0 0 0 0 1 0 ( 33) PHE58 0 0 0 0 0 0 0 0 4 0 0 prot.sequence shmfyavrrgrktgvfltwnecraqvdrfpaarFkkfatedeawafvrk/gshmfyavrrgrktgvfltwnecraqvdrfpaarFkkfatedeawafvrk/hmfyavrrgrktgvfltWnecraqvdrfpaarFkkfatedeawafvr >3btx_A:Clavaminate_synthase-like; title=X-RAY STRUCTURE OF HUMAN ABH2 BOUND TO DSDNA THROUGH ACTIVE SITE CROSS-LINKING organism=Homo sapiens DNA sequence DC(C273):DG(B271) DG(C274):DC(B270) DC(C275):DG(B269) DA(C276):DT(B268) DA(C277):DT(B267) DT(C278):DA(B266) DA(C279):DT(B264) DA(C280):DA(B263) DT(C281):DT(B262) DA(C282):DG(B261) DC(C283):DT(B260) DA(C284):DC(B259) chainA ( 47) VAL101 0 0 0 0 0 12 0 0 0 0 0 0 ( 48) PHE102 0 0 0 0 0 45 39 5 0 0 0 0 ( 50) LYS104 0 0 0 0 0 0 22 0 0 0 0 0 ( 52) HIS106 0 0 0 0 0 0 7 0 0 0 0 0 prot.sequence aswrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgKwHsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhigehrddcrelapgspiasvsfgasrdfvfrhkdsrgkspsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3bty_A:Clavaminate_synthase-like; title=CRYSTAL STRUCTURE OF HUMAN ABH2 BOUND TO DSDNA CONTAINING 1MEA THROUGH CROSS-LINKING AWAY FROM ACTIVE SITE organism=Homo sapiens DNA sequence DC(C2):DG(B13) DG(C3):DC(B12) DC(C4):DG(B11) DA(C5):DT(B10) DG(C6):DC(B9) DT(C7):DA(B8) DT(C8):DT(B6) DA(C9):DA(B5) DT(C10):DT(B4) DA(C11):DG(B3) DC(C12):DT(B2) DA(C13):DC(B1) chainA ( 46) VAL101 0 0 0 0 0 9 0 0 0 0 0 0 ( 47) PHE102 0 0 0 0 0 47 39 0 0 0 0 0 ( 49) LYS104 0 0 0 0 0 0 0 21 0 0 0 0 ( 50) TRP105 0 0 0 0 0 0 0 5 0 0 0 0 (114) CYS169 0 0 0 0 0 5 0 0 0 0 0 0 (148) ARG203 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence swrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgKWHsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhiCehrdderelapgspiasvsfgasrdfvfrhkdsRpsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3btz_A:Clavaminate_synthase-like; title=CRYSTAL STRUCTURE OF HUMAN ABH2 CROSS-LINKED TO DSDNA organism=Homo sapiens DNA sequence DC(C2):DG(B13) DG(C3):DC(B12) DC(C4):DG(B11) DA(C5):DT(B10) DT(C6):DA(B9) DT(C7):DA(B8) DA(C8):DA(B6) DT(C9):DG(B5) DC(C10):DT(B4) DA(C11):DG(B3) DC(C12):DG(B2) DC(C13):DA(B1) chainA ( 45) VAL101 0 0 0 0 0 15 0 0 0 0 0 0 ( 46) PHE102 0 0 0 0 0 34 37 11 0 0 0 0 prot.sequence wrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgkwhsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhigehrddcrelapgspiasvsfgasrdfvfrhkdsrgkspsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3bu0_A:Clavaminate_synthase-like; title=CRYSTAL STRUCTURE OF HUMAN ABH2 CROSS-LINKED TO DSDNA WITH COFACTORS organism=Homo sapiens DNA sequence DC(C2):DG(B13) DG(C3):DC(B12) DC(C4):DG(B11) DA(C5):DT(B10) DA(C6):DT(B9) DT(C7):DA(B8) DA(C8):DT(B6) DA(C9):DA(B5) DT(C10):DT(B4) DA(C11):DG(B3) DC(C12):DT(B2) DA(C13):DC(B1) chainA ( 46) VAL101 0 0 0 0 0 12 0 0 0 0 0 0 ( 47) PHE102 0 0 0 0 0 45 40 8 0 0 0 0 ( 49) LYS104 0 0 0 0 0 0 15 0 0 0 0 0 ( 51) HIS106 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence swrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgKwHsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhigehrddcrelapgspiasvsfgasrdfvfrhkdsrgkspsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3buc_A:Clavaminate_synthase-like; title=X-RAY STRUCTURE OF HUMAN ABH2 BOUND TO DSDNA WITH MN(II) AND 2KG organism=Homo sapiens DNA sequence DC(C2):DG(B13) DG(C3):DC(B12) DC(C4):DG(B11) DA(C5):DT(B10) DG(C6):DC(B9) DT(C7):DA(B8) DT(C8):DT(B6) DA(C9):DA(B5) DT(C10):DT(B4) DA(C11):DG(B3) DC(C12):DT(B2) DA(C13):DC(B1) chainA ( 46) VAL101 0 0 0 0 0 8 0 0 0 0 0 0 ( 47) PHE102 0 0 0 0 0 49 42 0 0 0 0 0 ( 49) LYS104 0 0 0 0 0 0 0 19 0 0 0 0 ( 50) TRP105 0 0 0 0 0 0 0 5 0 0 0 0 (114) CYS169 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence swrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgKWhsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhiCehrdderelapgspiasvsfgasrdfvfrhkdsrpsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3c0w_A:Homing_endonucleases; title=I-SCEI IN COMPLEX WITH A BOTTOM NICKED DNA SUBSTRATE organism=Saccharomyces cerevisiae DNA sequence DA(B2):DT(D25) DC(B3):DG(D24) DG(B4):DC(D23) DC(B5):DG(D22) DT(B6):DA(D21) DA(B7):DT(D20) DG(B8):DC(D19) DG(B9):DC(D18) DG(B10):DC(D17) DA(B11):DT(C16) DT(B12):DA(C15) DA(B13):DT(C14) DA(B14):DT(C13) DC(B15):DG(C12) DA(B16):DT(C11) DG(B17):DC(C10) DG(B18):DC(C9) DG(B19):DC(C8) DT(B20):DA(C7) DA(B21):DT(C6) DA(B22):DT(C5) DT(B23):DA(C4) DA(B24):DT(C3) DC(B25):DG(C2) chainA ( 12) PRO14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 ( 13) ASN15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 ( 44) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 ( 46) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 13 0 0 0 0 0 0 0 ( 48) ARG50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 10 2 0 0 0 0 0 ( 57) GLN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 0 0 ( 59) GLU61 0 0 0 0 0 0 0 0 0 0 0 0 9 8 2 0 0 0 0 0 0 0 0 0 ( 84) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 ( 86) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 8 12 22 0 0 0 0 0 0 0 0 0 ( 88) ASN90 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) HIS91 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) VAL96 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) THR98 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (100) GLN102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 (147) TRP149 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ASP150 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) TYR151 0 0 0 0 0 1 8 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ASN152 0 0 0 7 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) ASN163 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) GLN165 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) ASN192 0 0 0 0 0 0 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) LYS193 0 0 0 0 0 0 0 4 6 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nikknqvmnlgPNskllkeyksqlielnieqfeagiglilgdaYiRsRdegktyCmQfEwknkaymdhvcllydqwvlspphkKeRvNHlgnlViTwgaQtfkhqafnklanlfivnnkktipnnlvenyltpmslaywfmddggkWDYNknstnksivlNtQsftfeeveylvkglrnkfqlncyvkiNKnkpiiyidsmsylifynlikpylipqmmyklp >3c0x_A:Homing_endonucleases; title=I-SCEI IN COMPLEX WITH A TOP NICKED DNA SUBSTRATE organism=Saccharomyces cerevisiae DNA sequence DA(B2):DT(D25) DC(B3):DG(D24) DG(B4):DC(D23) DC(B5):DG(D22) DT(B6):DA(D21) DA(B7):DT(D20) DG(B8):DC(D19) DG(B9):DC(D18) DG(B10):DC(D17) DA(B11):DT(D16) DT(B12):DA(D15) DA(B13):DT(D14) DA(B14):DT(D13) DC(C15):DG(D12) DA(C16):DT(D11) DG(C17):DC(D10) DG(C18):DC(D9) DG(C19):DC(D8) DT(C20):DA(D7) DA(C21):DT(D6) DA(C22):DT(D5) DT(C23):DA(D4) DA(C24):DT(D3) DC(C25):DG(D2) chainA ( 12) PRO14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 ( 13) ASN15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 0 0 ( 44) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 ( 46) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 12 0 0 0 0 0 0 0 ( 48) ARG50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 2 0 0 0 0 0 ( 57) GLN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 4 0 0 0 0 0 0 0 ( 59) GLU61 0 0 0 0 0 0 0 0 0 0 0 0 9 9 1 0 0 0 0 0 0 0 0 0 ( 84) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 4 0 0 0 0 0 0 0 0 ( 86) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 6 12 21 0 0 0 0 0 0 0 0 0 ( 88) ASN90 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) VAL96 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) THR98 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (100) GLN102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 (147) TRP149 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ASP150 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) TYR151 0 0 0 0 0 1 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ASN152 0 0 0 11 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) ASN163 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) GLN165 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) ASN192 0 0 0 0 0 0 2 5 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) LYS193 0 0 0 0 0 0 0 8 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nikknqvmnlgPNskllkeyksqlielnieqfeagiglilgdaYiRsRdegktycmQfEwknkaymdhvcllydqwvlspphkKeRvNhlgnlViTwgaQtfkhqafnklanlfivnnkktipnnlvenyltpmslaywfmddggkWDYNknstnksivlNtQsftfeeveylvkglrnkfqlncyvkiNKnkpiiyidsmsylifynlikpylipqmmyklp >3c1b_A:Histone-fold; title=THE EFFECT OF H3 K79 DIMETHYLATION AND H4 K20 TRIMETHYLATION ON NUCLEOSOME AND CHROMATIN STRUCTURE organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DC(J168):DA(I126) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DG(J271):DC(I22) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR441 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >3c1b_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE EFFECT OF H3 K79 DIMETHYLATION AND H4 K20 TRIMETHYLATION ON NUCLEOSOME AND CHROMATIN STRUCTURE organism=XENOPUS LAEVIS / XENOPUS (SILURANA) TROPICALIS / XENOPUS (SILURANA) TROPICALIS / XENOPUS (SILURANA) TROPICALIS / XENOPUS (SILURANA) TROPICALIS / XENOPUS (SILURANA) TROPICALIS / XENOPUS (SILURANA) TROPICALIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DC(J168):DA(I126) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DG(J271):DC(I22) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR441 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD ( 3) ARG1230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 4) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 16) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rdNIqgitkpairrlarrggvkrisglIyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfgg/akTRssraglqfpvgrvhrllrkgnyaErvgagapvylaavleylTaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/krhrvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/ktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsReiqtavrlllpgelakhavsegtkavtkytsa >3c1c_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE EFFECT OF H3 K79 DIMETHYLATION AND H4 K20 TRIMETHYLATION ON NUCLEOSOME AND CHROMATIN STRUCTURE organism=XENOPUS LAEVIS / XENOPUS (SILURANA) TROPICALIS / XENOPUS (SILURANA) TROPICALIS / XENOPUS (SILURANA) TROPICALIS / XENOPUS (SILURANA) TROPICALIS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I21):DA(J273) DC(I22):DA(J272) DA(I24):DT(J269) DC(I25):DG(J268) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I55):DT(J239) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 29) ARG842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 14) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 2) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdftdlrfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirgera/niQgitkpairrlarrggvkrisgliyEetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/rkesyaiyvykvlkqvhpdtgisskamsImnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdftdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger/rkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgRvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >3c25_AB: title=CRYSTAL STRUCTURE OF NOTI RESTRICTION ENDONUCLEASE BOUND TO COGNATE DNA organism=Nocardia otitidiscaviarum DNA sequence DC(C1):DG(D22) DG(C2):DC(D21) DG(C3):DC(D20) DA(C4):DT(D19) DG(C5):DC(D18) DG(C6):DC(D17) DC(C7):DG(D16) DG(C8):DC(D15) DC(C9):DG(D14) DG(C10):DC(D13) DG(C11):DC(D12) DC(C12):DG(D11) DC(C13):DG(D10) DG(C14):DC(D9) DC(C15):DG(D8) DG(C16):DC(D7) DC(C17):DG(D6) DC(C18):DG(D5) DG(C19):DC(D4) DC(C20):DG(D3) DC(C21):DG(D2) DG(C22):DC(D1) chainA (176) ASP187 0 0 0 0 0 0 0 0 0 1 7 6 0 0 0 0 0 0 0 0 0 0 (178) HIS189 0 0 0 0 0 0 21 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) GLU227 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ASN230 0 0 0 0 0 0 0 1 9 6 1 0 0 0 0 0 0 0 0 0 0 0 (222) ASN233 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (226) ARG237 0 0 0 0 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 0 0 0 chainB (176) ASP187 0 0 0 0 0 0 0 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 (178) HIS189 0 0 0 0 0 0 0 0 0 0 0 0 0 12 14 21 0 0 0 0 0 0 (216) GLU227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (219) ASN230 0 0 0 0 0 0 0 0 0 0 0 1 6 9 1 0 0 0 0 0 0 0 (222) ASN233 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (226) ARG237 0 0 0 0 0 0 0 0 0 16 13 1 0 0 0 0 0 0 0 0 0 0 prot.sequence anfiaeffghrvypevvsteaarndqatgtcpfltaaklvetscvkaetsrgvcvvntavdnerydwlvcpnraldplfmsaasrklfgygpteplqfiaaptladqavrdgirewldrgvhvvayfqeklggelsisktdsspEfsfdwtlaevesiypvpkikrygvleiqtmDfHgsykhavgaidialvegidfhgwlptpagraalskkmEgpNlsNvfkRtfyqmaykfalsghqrcagtgfaipqsvwkswlrhlanptlidngdgtfslgdtrndsenawifvfeldpdtdasprplaphleirvnvdtlidlalrespraalgpsgpvatftdkvearmlrfwpk/anfiaeffghrvypevvsteaarndqatgtcpfltaaklvetscvkaetsrgvcvvntavdnerydwlvcpnraldplfmsaasrklfgygpteplqfiaaptladqavrdgirewldrgvhvvayfqeklggelsisktdsspEfsfdwtlaevesiypvpkikrygvleiqtmDfHgsykhavgaidialvegidfhgwlptpagraalskkmEgpNlsNvfkRtfyqmaykfalsghqrcagtgfaipqsvwkswlrhlanptlidngdgtfslgdtrndsenawifvfeldpdtdasprplaphleirvnvdtlidlalrespraalgpsgpvatftdkvearmlrfwp >3c25_B: title=CRYSTAL STRUCTURE OF NOTI RESTRICTION ENDONUCLEASE BOUND TO COGNATE DNA organism=Nocardia otitidiscaviarum DNA sequence DC(C1):DG(D22) DG(C2):DC(D21) DG(C3):DC(D20) DA(C4):DT(D19) DG(C5):DC(D18) DG(C6):DC(D17) DC(C7):DG(D16) DG(C8):DC(D15) DC(C9):DG(D14) DG(C10):DC(D13) DG(C11):DC(D12) DC(C12):DG(D11) DC(C13):DG(D10) DG(C14):DC(D9) DC(C15):DG(D8) DG(C16):DC(D7) DC(C17):DG(D6) DC(C18):DG(D5) DG(C19):DC(D4) DC(C20):DG(D3) DC(C21):DG(D2) DG(C22):DC(D1) chainB (176) ASP187 0 0 0 0 0 0 0 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 (178) HIS189 0 0 0 0 0 0 0 0 0 0 0 0 0 12 14 21 0 0 0 0 0 0 (216) GLU227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (219) ASN230 0 0 0 0 0 0 0 0 0 0 0 1 6 9 1 0 0 0 0 0 0 0 (222) ASN233 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (226) ARG237 0 0 0 0 0 0 0 0 0 16 13 1 0 0 0 0 0 0 0 0 0 0 prot.sequence anfiaeffghrvypevvsteaarndqatgtcpfltaaklvetscvkaetsrgvcvvntavdnerydwlvcpnraldplfmsaasrklfgygpteplqfiaaptladqavrdgirewldrgvhvvayfqeklggElsisktdsspEfSfdwtlaevesiypvpkikrygvleiqtmDfHgsykhavgaidialvegidfhgwlptpagraalskkmEgpNlsNvfkRtfyqmaykfalsghqrcagtgfaipqsvwkswlrhlanptlidngdgtfslgdtrndsenawifvfeldpdtdasprplaphleirvnvdtlidlalrespraalgpsgpvatftdkvearmlrfwp >3c28_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF THE PRODUCT SYNAPSE COMPLEX organism=Bacteriophage P1 DNA sequence DA(C2):DT(D35) DT(C3):DA(D34) DA(C4):DT(D33) DA(C5):DT(D32) DC(C6):DG(D31) DT(C7):DA(D30) DT(C8):DA(D29) DC(C9):DG(D28) DG(C10):DC(D27) DT(C11):DA(D26) DA(C12):DT(D25) DT(C13):DA(D24) DA(C14):DT(D23) DA(C15):DT(D22) DT(C16):DA(D21) DG(C17):DC(D20) DT(C18):DA(D19) DA(C19):DT(D18) DT(C20):DA(D17) DG(C21):DC(D16) DC(C22):DG(D15) DT(C23):DA(D14) DA(C24):DT(D13) DT(C25):DA(D12) DA(C26):DT(D11) DC(C27):DG(D10) DG(C28):DC(D9) DA(C29):DT(D8) DA(C30):DT(D7) DG(C31):DC(D6) DT(C32):DA(D5) DT(C33):DA(D4) DA(C34):DT(D3) DT(C35):DA(D2) chainA ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 5 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (202) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (203) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 7 (216) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (218) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 15 10 1 0 0 0 0 0 (221) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 (240) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 (275) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 1 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 9 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG243 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 7 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 1 7 16 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ASN319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdimlihalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvNivmnyirgmvrlled >3c28_B:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF THE PRODUCT SYNAPSE COMPLEX organism=Bacteriophage P1 DNA sequence DA(C2):DT(D35) DT(C3):DA(D34) DA(C4):DT(D33) DA(C5):DT(D32) DC(C6):DG(D31) DT(C7):DA(D30) DT(C8):DA(D29) DC(C9):DG(D28) DG(C10):DC(D27) DT(C11):DA(D26) DA(C12):DT(D25) DT(C13):DA(D24) DA(C14):DT(D23) DA(C15):DT(D22) DT(C16):DA(D21) DG(C17):DC(D20) DT(C18):DA(D19) DA(C19):DT(D18) DT(C20):DA(D17) DG(C21):DC(D16) DC(C22):DG(D15) DT(C23):DA(D14) DA(C24):DT(D13) DT(C25):DA(D12) DA(C26):DT(D11) DC(C27):DG(D10) DG(C28):DC(D9) DA(C29):DT(D8) DA(C30):DT(D7) DG(C31):DC(D6) DT(C32):DA(D5) DT(C33):DA(D4) DA(C34):DT(D3) DT(C35):DA(D2) chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 1 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 9 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG243 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 7 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 1 7 16 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ASN319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvNivmnyirgmvrlled >3c29_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRE-LOXP SYNAPTIC STRUCTURE organism=Bacteriophage P1 DNA sequence DA(C2):DT(D35) DT(C3):DA(D34) DA(C4):DT(D33) DA(C5):DT(D32) DC(C6):DG(D31) DT(C7):DA(D30) DT(C8):DA(D29) DC(C9):DG(D28) DG(C10):DC(D27) DT(C11):DA(D26) DA(C12):DT(D25) DT(C13):DA(D24) DA(C14):DT(D23) 1AP(C15):DT(D22) DT(C16):DA(D21) DG(C17):DC(D20) DT(C18):DA(D19) DA(C19):DT(D18) DT(C20):DA(D17) DG(C21):DC(D16) DC(C22):DG(D15) DT(C23):DA(D14) DA(C24):DT(D13) DT(C25):DA(D12) DA(C26):DT(D11) DC(C27):DG(D10) DG(C28):DC(D9) DA(C29):DT(D8) DA(C30):DT(D7) DG(C31):DC(D6) DT(C32):DA(D5) DT(C33):DA(D4) DA(C34):DT(D3) DT(C35):DA(D2) chainA ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 4 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (224) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 (225) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 6 (238) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 17 8 1 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 1 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 2 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 14 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG243 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 1 9 15 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ASN319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnIvmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvNivmnyirnldsetgamvrlled >3c29_G:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRE-LOXP SYNAPTIC STRUCTURE organism=Bacteriophage P1 DNA sequence DA(F2):DT(E35) DT(F3):DA(E34) DA(F4):DT(E33) DA(F5):DT(E32) DC(F6):DG(E31) DT(F7):DA(E30) DT(F8):DA(E29) DC(F9):DG(E28) DG(F10):DC(E27) DT(F11):DA(E26) DA(F12):DT(E25) DT(F13):DA(E24) DA(F14):DT(E23) DG(F15):DC(E22) DC(F16):DG(E21) DA(F17):DT(E20) DT(F18):DA(E19) DA(F19):DT(E18) DC(F20):DG(E17) DA(F21):DT(E16) DT(F22):1AP(E15) DT(F23):DA(E14) DA(F24):DT(E13) DT(F25):DA(E12) DA(F26):DT(E11) DC(F27):DG(E10) DG(F28):DC(E9) DA(F29):DT(E8) DA(F30):DT(E7) DG(F31):DC(E6) DT(F32):DA(E5) DT(F33):DA(E4) DA(F34):DT(E3) DT(F35):DA(E2) chainG ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 4 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 13 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 7 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 2 10 14 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcrvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnIvmnyirnldsetgamvrlled >3c2i_A:DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF METHYL-CPG BINDING DOMAIN OF HUMAN MECP2 IN COMPLEX WITH A METHYLATED DNA SEQUENCE FROM BDNF organism=Homo sapiens DNA sequence DT(C22):DA(B20) DA(C23):DT(B19) DG(C24):DC(B18) DA(C25):DT(B17) DA(C26):DT(B16) DG(C27):DC(B15) DA(C28):DT(B14) DA(C29):DT(B13) DT(C30):DA(B12) DT(C31):DA(B11) DC(C32):DG(B10) 5CM(C33):DG(B9) DG(C34):5CM(B8) DT(C35):DA(B7) DT(C36):DA(B6) DC(C37):DG(B5) DC(C38):DG(B4) DA(C39):DT(B3) DG(C40):DC(B2) chainA ( 21) ARG111 0 0 0 0 0 0 0 0 0 0 3 14 16 0 0 0 0 0 0 ( 31) ASP121 0 0 0 0 0 0 0 0 0 0 1 1 3 0 0 0 0 0 0 ( 33) TYR123 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 43) ARG133 0 0 0 0 0 0 0 0 0 0 0 19 12 3 0 0 0 0 0 prot.sequence rgpmyddptlpegwtrklkqRksgrsagkyDvYlinpqgkafRskvelimyfekvgdtsldpndfdftvtgr >3c2k_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA WITH A GAPPED DNA SUBSTRATE AND DUMPNPP WITH MANGANESE IN THE ACTIVE SITE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 32 ( 26) LYS35 0 0 0 0 3 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3c2l_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A C:DAPCPP MISMATCH IN THE ACTIVE SITE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 34 ( 26) LYS35 0 0 0 0 7 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3c2m_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A G:DAPCPP MISMATCH IN THE ACTIVE SITE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 35 0 0 0 0 ( 26) LYS35 7 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3c2p_B: title=X-RAY CRYSTAL STRUCTURE OF THE N4 MINI-VRNAP P1 PROMOTER COMPLEX organism=Bacteriophage N4 DNA sequence DG(D10):DC(D22) DT(D11):DA(D21) DT(D12):DA(D20) DG(D13):DC(D19) DC(D14):DG(D18) DG(D15):DA(D17) chainB (107) LYS114 0 0 0 0 0 8 (260) LYS267 9 0 0 0 0 0 (261) LYS268 11 0 0 0 0 0 (262) THR269 6 2 0 0 0 0 (894) ASP901 0 0 0 2 6 18 (897) ARG904 0 0 22 12 8 0 prot.sequence lkegidavypslvgtadskaegiknyfklsftlpeeqksrtvgseaplkdvaqalssraryelfteketanpafngevikrykelmehgegiadilrsrlakflntKdvgkrfaqgteanrwvggkllniveqdgdtfkyneqllqtavlaglqwrltatsntaikdakdvaaitgidqallpeglveqfdtgmtlteavsslaqkiesywglsrnpnaplgytkgiptamaaeilaafvestdvvenivdmseidpdnKKTiglytiteldsfdpinsfptaieeavlvnptekmffgddippvantqlrnpavrntpeqkaalkaeqatefyvhtpmvqfyetlgkdrilelmgagtlnkellndnhakslegknrsvedsynqlfsvieqvraqsedistvpihyaynmtrvgrmqmlgkynpqsaklvreailptkatldlsnqnnedfsafqlglaqaldikvhtmtrevmsdeltkllegnlkpaidmmvefnttgslpenavdvlntalgdrksfvalmalmeysrylvaedksafvtplyveadgvtngpinammlmtgglftpdwirniakgglfigspnktmnehrstadnndlyqastnalmeslgklrsnyasnmpiqsqidsllslmdlflpdinlgengalelkrgiaknpltitiygsgargiagklvssvtdaiyermsdvlkarakdpnisaamamfgkqaaseahaeellarflkdmetltstvpvkrkgvlelqstgtgakgkinpktytikgeqlkalqenmlhffveplrngitqtvgeslvysteqlqkatqiqsvvledmfkqrvqeklaekakdptwkkgdfltqkelndiqaslnnlapmietgsqtfyiagsenaevanqvlatnldDrmRvpmsiyapaqagvagipfmtigtgdgmmmqtlstmkgapkntlkifdgmniglnditdasrkaneavytswqgnpiknvyesyakfmknvdfsklspealeaigksaleydqrenatvddianaasliernlrnialgvdirhkvldkvnlsidqmaavgapyqnngkidlsnmtpeqqadelnklfreelearkq >3c3l_B: title=X-RAY CRYSTAL STRUCTURE OF THE N4 MINI-VRNAP P2 PROMOTER COMPLEX organism=Bacteriophage N4 DNA sequence DG(D10):DC(D22) DA(D11):DT(D21) DA(D12):DT(D20) DG(D13):DC(D19) DC(D14):DG(D18) DG(D15):DA(D17) chainB (104) LYS114 0 0 0 0 0 7 (257) LYS267 14 0 0 0 0 0 (258) LYS268 6 0 0 0 0 0 (259) THR269 9 3 0 0 0 0 (891) ASP901 0 0 0 2 8 14 (894) ARG904 0 0 21 13 5 0 prot.sequence gidavypslvgtadskaegiknyfklsftlpeeqksrtvgseaplkdvaqalssraryelfteketanpafngevikrykelmehgegiadilrsrlakflntKdvgkrfaqgteanrwvggkllniveqdgdtfkyneqllqtavlaglqwrltatsntaikdakdvaaitgidqallpeglveqfdtgmtlteavsslaqkiesywglsrnpnaplgytkgiptamaaeilaafvestdvvenivdmseidpdnKKTiglytiteldsfdpinsfptaieeavlvnptekmffgddippvantqlrnpavrntpeqkaalkaeqatefyvhtpmvqfyetlgkdrilelmgagtlnkellndnhakslegknrsvedsynqlfsvieqvraqsedistvpihyaynmtrvgrmqmlgkynpqsaklvreailptkatldlsnqnnedfsafqlglaqaldikvhtmtrevmsdeltkllegnlkpaidmmvefnttgslpenavdvlntalgdrksfvalmalmeysrylvaedksafvtplyveadgvtngpinammlmtgglftpdwirniakgglfigspnktmnehrstadnndlyqastnalmeslgklrsnyasnmpiqsqidsllslmdlflpdinlgengalelkrgiaknpltitiygsgargiagklvssvtdaiyermsdvlkarakdpnisaamamfgkqaaseahaeellarflkdmetltstvpvkrkgvlelqstgtgakgkinpktytikgeqlkalqenmlhffveplrngitqtvgeslvysteqlqkatqiqsvvledmfkqrvqeklaekakdptwkkgdfltqkelndiqaslnnlapmietgsqtfyiagsenaevanqvlatnldDrmRvpmsiyapaqagvagipfmtigtgdgmmmqtlstmkgapkntlkifdgmniglnditdasrkaneavytswqgnpiknvyesyakfmknvdfsklspealeaigksaleydqrenatvddianaasliernlrnialgvdirhkvldkvnlsidqmaavgapyqnngkidlsnmtpeqqadelnklfreel >3c46_B: title=X-RAY CRYSTAL STRUCTURE OF THE N4 MINI-VRNAP P2_7A PROMOTER COMPLEX SOAKED WITH MGCL2 organism=Bacteriophage N4 DNA sequence DG(D10):DC(D22) DA(D11):DT(D21) DA(D12):DT(D20) DG(D13):DC(D19) DC(D14):DG(D18) DG(D15):DA(D17) chainB (110) LYS114 0 0 0 0 0 7 (263) LYS267 10 0 0 0 0 0 (264) LYS268 10 0 0 0 0 0 (265) THR269 6 1 0 0 0 0 (897) ASP901 0 0 0 2 6 14 (900) ARG904 0 0 21 12 5 0 prot.sequence teelkegidavypslvgtadskaegiknyfklsftlpeeqksrtvgseaplkdvaqalssraryelfteketanpafngevikrykelmehgegiadilrsrlakflntKdvgkrfaqgteanrwvggkllniveqdgdtfkyneqllqtavlaglqwrltatsntaikdakdvaaitgidqallpeglveqfdtgmtlteavsslaqkiesywglsrnpnaplgytkgiptamaaeilaafvestdvvenivdmseidpdnKKTiglytiteldsfdpinsfptaieeavlvnptekmffgddippvantqlrnpavrntpeqkaalkaeqatefyvhtpmvqfyetlgkdrilelmgagtlnkellndnhakslegknrsvedsynqlfsvieqvraqsedistvpihyaynmtrvgrmqmlgkynpqsaklvreailptkatldlsnqnnedfsafqlglaqaldikvhtmtrevmsdeltkllegnlkpaidmmvefnttgslpenavdvlntalgdrksfvalmalmeysrylvaedksafvtplyveadgvtngpinammlmtgglftpdwirniakgglfigspnktmnehrstadnndlyqastnalmeslgklrsnyasnmpiqsqidsllslmdlflpdinlgengalelkrgiaknpltitiygsgargiagklvssvtdaiyermsdvlkarakdpnisaamamfgkqaaseahaeellarflkdmetltstvpvkrkgvlelqstgtgakgkinpktytikgeqlkalqenmlhffveplrngitqtvgeslvysteqlqkatqiqsvvledmfkqrvqeklaekakdptwkkgdfltqkelndiqaslnnlapmietgsqtfyiagsenaevanqvlatnldDrmRvpmsiyapaqagvagipfmtigtgdgmmmqtlstmkgapkntlkifdgmniglnditdasrkaneavytswqgnpiknvyesyakfmknvdfsklspealeaigksaleydqrenatvddianaasliernlrnialgvdirhkvldkvnlsidqmaavgapyqnngkidlsnmtpeqqadelnklfreelear >3c58_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE WILD-TYPE LACTOCOCCUS LACTIS FPG (MUTM) AND A N7-BENZYL-FAPY-DG CONTAINING DNA organism=Lactococcus lactis DNA sequence DC(C16):DG(B14) DG(C17):DC(B13) DA(C18):DT(B12) DG(C19):DC(B11) DA(C20):DT(B10) DA(C21):DT(B9) DA(C22):DT(B8) DC(C23):SOS(B7) DA(C24):DT(B6) DA(C25):DT(B5) DA(C26):DT(B4) DG(C27):DC(B3) DA(C28):DT(B2) chainA ( 1) PRO1 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 2) GLU2 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 5) GLU5 0 0 0 0 0 0 0 13 0 0 0 0 0 ( 74) ARG74 0 0 0 0 0 3 14 0 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 24 1 0 0 0 0 0 ( 76) GLU76 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 78) LYS78 0 0 0 0 0 0 0 2 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 2 15 36 0 0 0 0 (111) PHE111 0 0 0 0 0 0 72 11 0 0 0 0 0 (172) ILE172 0 0 0 0 0 0 0 5 0 0 0 0 0 (173) TYR173 0 0 0 0 0 0 0 3 0 0 0 0 0 (217) SER217 0 0 0 0 0 0 0 2 0 0 0 0 0 (219) ILE219 0 0 0 0 0 0 0 8 0 0 0 0 0 (236) TYR238 0 0 0 0 0 0 0 2 0 0 0 0 0 (258) ARG260 0 0 0 0 0 1 10 0 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMegkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssirsalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >3cbb_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HEPATOCYTE NUCLEAR FACTOR 4ALPHA IN COMPLEX WITH DNA: DIABETES GENE PRODUCT organism=Homo sapiens DNA sequence DG(D2):DC(C21) DG(D3):DC(C20) DG(D4):DC(C19) DA(D5):DT(C18) DC(D6):DG(C17) DT(D7):DA(C16) DG(D8):DC(C15) DA(D9):DT(C14) DA(D10):DT(C13) DC(D11):DG(C12) DT(D12):DA(C11) DT(D13):DA(C10) DT(D14):DA(C9) DG(D15):DC(C8) DG(D16):DC(C7) DA(D17):DT(C6) DC(D18):DG(C5) DT(D19):DA(C4) DT(D20):DA(C3) DC(D21):DG(C2) chainA ( 21) ASP69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 24) LYS72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 ( 28) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 ( 29) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 13 7 0 0 0 0 0 0 prot.sequence alcaicgdratgkhygasscDgcKgffRRsvrknhmyscrfsrqcvvdkdkrnqcrycrlkkcfragmkkeavqne >3cbb_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HEPATOCYTE NUCLEAR FACTOR 4ALPHA IN COMPLEX WITH DNA: DIABETES GENE PRODUCT organism=Homo sapiens DNA sequence DG(C2):DC(D21) DA(C3):DT(D20) DA(C4):DT(D19) DG(C5):DC(D18) DT(C6):DA(D17) DC(C7):DG(D16) DC(C8):DG(D15) DA(C9):DT(D14) DA(C10):DT(D13) DA(C11):DT(D12) DG(C12):DC(D11) DT(C13):DA(D10) DT(C14):DA(D9) DC(C15):DG(D8) DA(C16):DT(D7) DG(C17):DC(D6) DT(C18):DA(D5) DC(C19):DG(D4) DC(C20):DG(D3) DC(C21):DG(D2) chainA ( 21) ASP69 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS72 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG76 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG77 0 0 0 0 0 0 7 13 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ASP69 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 24) LYS72 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 ( 28) ARG76 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 ( 29) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 prot.sequence alcaicgdratgkhygasscDgcKgffRRsvrknhmyscrfsrqcvvdkdkrnqcrycrlkkcfragmkkeavqne/alcaicgdratgkhygasscDgcKgffRRsvrknhmyscrfsrqcvvdkdkrnqcrycrlkkcfragmkkeavqnerd >3cfp_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF THE REPLICATING COMPLEX OF A POL ALPHA FAMILY DNA POLYMERASE, TERNARY COMPLEX 1 organism=Bacteriophage RB69 DNA sequence DA(T3):TTP(A1006) DG(T4):DOC(P115) DG(T5):DC(P114) DT(T6):DA(P113) DA(T7):DT(P112) DA(T8):DT(P111) DG(T9):DC(P110) DC(T10):DG(P109) DA(T11):DT(P108) DG(T12):DC(P107) DT(T13):DA(P106) DC(T14):DG(P105) DC(T15):DG(P104) DG(T16):DC(P103) DC(T17):DG(P102) chainA (361) PRO361 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ASP411 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) THR413 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) SER414 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) LEU415 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (416) TYR416 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) ARG482 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) LYS486 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (560) LYS560 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (564) ASN564 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (623) ASP623 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 (800) LYS800 0 0 0 0 0 0 0 1 4 6 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfdipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniidvyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkaliNglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygDtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3cfr_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF THE REPLICATING COMPLEX OF A POL ALPHA FAMILY DNA POLYMERASE, TERNARY COMPLEX 2 organism=BACTERIOPHAGE RB69 DNA sequence DA(T4):TTP(A916) DG(T5):DOC(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (361) PRO361 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ASP411 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) THR413 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) SER414 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) LEU415 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (416) TYR416 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) ARG482 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) LYS486 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (560) LYS560 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (564) ASN564 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (623) ASP623 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 0 6 5 0 0 0 0 0 0 0 0 0 0 (800) LYS800 0 0 0 0 0 0 0 0 4 5 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfdipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniidvyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkaliNglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3clc_ABCD:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I TETRAMER IN COMPLEX WITH ITS NATURAL 35 BASE-PAIR OPERATOR organism=Enterobacter sp. DNA sequence DA(E1):DT(F35) DT(E2):DA(F34) DG(E3):DC(F33) DT(E4):DA(F32) DG(E5):DC(F31) DA(E6):DT(F30) DC(E7):DG(F29) DT(E8):DA(F28) DT(E9):DA(F27) DA(E10):DT(F26) DT(E11):DA(F25) DA(E12):DT(F24) DG(E13):DC(F23) DT(E14):DA(F22) DC(E15):DG(F21) DC(E16):DG(F20) DG(E17):DC(F19) DT(E18):DA(F18) DG(E19):DC(F17) DT(E20):DA(F16) DG(E21):DC(F15) DA(E22):DT(F14) DT(E23):DA(F13) DT(E24):DA(F12) DA(E25):DT(F11) DT(E26):DA(F10) DA(E27):DT(F9) DG(E28):DC(F8) DT(E29):DA(F7) DC(E30):DG(F6) DA(E31):DT(F5) DA(E32):DT(F4) DC(E33):DG(F3) DA(E34):DT(F2) DT(E35):DA(F1) chainA ( 33) ASP34 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 28 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 4 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 2 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 chainD ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 24 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 4 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 3 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqedlayksnlDRTyiSgieRnsRnltikslelimkglevsdvvffemlikeilk/esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtQEdlayksnlDrTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtqedlayksnlDRTyiSgieRnsRnltikslelimkglevsdvvffemlikeilk >3clc_C:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I TETRAMER IN COMPLEX WITH ITS NATURAL 35 BASE-PAIR OPERATOR organism=Enterobacter sp. DNA sequence DA(E1):DT(F35) DT(E2):DA(F34) DG(E3):DC(F33) DT(E4):DA(F32) DG(E5):DC(F31) DA(E6):DT(F30) DC(E7):DG(F29) DT(E8):DA(F28) DT(E9):DA(F27) DA(E10):DT(F26) DT(E11):DA(F25) DA(E12):DT(F24) DG(E13):DC(F23) DT(E14):DA(F22) DC(E15):DG(F21) DC(E16):DG(F20) DG(E17):DC(F19) DT(E18):DA(F18) DG(E19):DC(F17) DT(E20):DA(F16) DG(E21):DC(F15) DA(E22):DT(F14) DT(E23):DA(F13) DT(E24):DA(F12) DA(E25):DT(F11) DT(E26):DA(F10) DA(E27):DT(F9) DG(E28):DC(F8) DT(E29):DA(F7) DC(E30):DG(F6) DA(E31):DT(F5) DA(E32):DT(F4) DC(E33):DG(F3) DA(E34):DT(F2) DT(E35):DA(F1) chainC ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtQEdlayksnlDrTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh >3clz_C:PUA_domain-like; title=THE SET AND RING ASSOCIATED (SRA) DOMAIN OF UHRF1 BOUND TO METHYLATED DNA organism=Homo sapiens DNA sequence DC(J1):DG(I12) DC(J2):DG(I11) DC(J3):DG(I10) DT(J4):DA(I9) DG(J5):DC(I8) DC(J6):DG(I7) DG(J7):5CM(I6) DG(J8):DC(I5) DG(J9):DC(I4) DC(J10):DG(I3) DC(J11):DG(I2) DC(J12):DG(I1) chainC ( 31) VAL446 0 0 0 0 0 0 3 5 0 0 0 0 ( 48) ALA463 0 0 0 0 0 0 1 0 0 0 0 0 ( 51) TYR466 0 0 0 0 0 0 25 0 0 0 0 0 ( 54) ASP469 0 0 0 0 0 0 11 0 0 0 0 0 ( 63) TYR478 0 0 0 0 0 0 28 0 0 0 0 0 ( 64) THR479 0 0 0 0 0 0 2 0 0 0 0 0 ( 66) SER481 0 0 0 0 0 0 1 0 0 0 0 0 ( 71) LEU486 0 0 0 0 0 0 0 1 0 0 0 0 ( 74) ASN489 0 0 0 0 0 14 0 1 0 0 0 0 ( 76) ARG491 0 0 0 0 0 58 15 32 0 0 0 0 prot.sequence nhygpipgipvgtmwrfrvqvsesgvhrphVagihgrsndgayslvlaggyeddvdhgnfftytgsggrdLsgNkRTaeqscdqkltntnralalncfapindqegaeakdwrsgkpvrvvrnvkggknskyapaegnrydgiykvvkywpekgksgflvwryllrrdddepgpwtkegkdrikklgltmqypegylealanah >3cmu_A:P-loop_containing_nucleoside_triphosphate_hydrolases;RecA_protein,_C-terminal_domain; title=MECHANISM OF HOMOLOGOUS RECOMBINATION FROM THE RECA-SSDNA/DSDNA STRUCTURES organism=? DNA sequence DT(B1002) DT(B1003) DT(B1004) DT(B1005) DT(B1006) DT(B1007) DT(B1008) DT(B1009) DT(B1010) DT(B1011) DT(B1012) DT(B1013) DT(B1014) DT(B1015) DT(B1016) chainA (161) MET197 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (162) LYS198 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ILE199 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 (456) MET1164 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (461) ARG1169 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (489) MET1197 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (490) LYS1198 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (491) ILE1199 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 (789) MET2164 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (794) ARG2169 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 (822) MET2197 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (823) LYS2198 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (824) ILE2199 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 (1122) MET3164 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (1127) ARG3169 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 (1155) MET3197 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (1156) LYS3198 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (1157) ILE3199 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 (1455) MET4164 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (1460) ARG4169 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 (1487) ARG4196 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (1488) MET4197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (1489) LYS4198 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (1490) ILE4199 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 (1786) ARG5169 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 prot.sequence vetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshmglaarmmsqamrklagnlkqsntllifinqirMKIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllaidenkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshMglaaRmmsqamrklagnlkqsntllifinqirMKIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpnsaidenkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshMglaaRmmsqamrklagnlkqsntllifinqirMKIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpnsaidenkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshMglaaRmmsqamrklagnlkqsntllifinqirMKIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpnsaidenkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshMglaaRmmsqamrklagnlkqsntllifinqiRMKIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpnsaidenkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiemglaaRmmsqamrklagnlkqsntllifinqirnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelll >3cmy_A:Homeodomain-like; title=STRUCTURE OF A HOMEODOMAIN IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(B2):DG(C14) DA(B3):DT(C13) DT(B4):DA(C12) DA(B5):DT(C11) DA(B6):DT(C10) DT(B7):DA(C9) DC(B8):DG(C8) chainA ( 3) ARG2 0 0 0 5 6 0 0 ( 6) ARG5 0 16 9 7 0 0 0 ( 48) VAL47 0 0 0 0 2 2 0 ( 51) SER50 0 0 0 0 0 0 4 ( 52) ASN51 0 0 0 14 10 0 0 prot.sequence gqRrsRttftaeqleeleraferthypdiytreelaqrakltearvqVwfSNrrarwrkq >3co6_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FOXO1 DBD BOUND TO DBE1 DNA organism=Homo sapiens DNA sequence DC(B13):DG(A12) DA(B14):DT(A11) DA(B15):DT(A10) DG(B16):DC(A9) DG(B17):DC(A8) DT(B18):DA(A7) DA(B19):DT(A6) DA(B20):DT(A5) DA(B21):DT(A4) DC(B22):DG(A3) DA(B23):DT(A2) DA(B24):DT(A1) DA(B25):DT(A-1) DC(B26):DG(A-2) DC(B27):DG(A-3) DA(B28):DT(A-4) chainC ( 58) ASN211 0 0 0 0 0 0 4 11 0 0 0 0 0 0 0 0 ( 59) SER212 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 61) ARG214 0 0 0 0 0 0 0 0 1 6 10 0 0 0 0 0 ( 62) HIS215 0 0 0 0 0 13 11 9 0 0 0 0 0 0 0 0 ( 63) ASN216 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 65) SER218 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 ( 66) LEU219 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence ssrrnawgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdsnssagwkNSiRHNlSLhskfirvqnegtgksswwmlnpegg >3co7_F:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FOXO1 DBD BOUND TO DBE2 DNA organism=Homo sapiens DNA sequence DT(A-2):DA(B30) DC(A-1):DG(B29) DT(A1):DA(B28) DT(A2):DA(B27) DG(A3):DC(B26) DT(A4):DA(B25) DT(A5):DA(B24) DT(A6):DA(B23) DA(A7):DT(B22) DC(A8):DG(B21) DA(A9):DT(B20) DT(A10):DA(B19) DT(A11):DA(B18) DT(A12):DA(B17) DT(A13):DA(B16) DG(A14):DC(B15) DT(D-2):DA(E30) DC(D-1):DG(E29) DT(D1):DA(E28) DT(D2):DA(E27) DG(D3):DC(E26) DT(D4):DA(E25) DT(D5):DA(E24) DT(D6):DA(E23) DA(D7):DT(E22) DC(D8):DG(E21) DA(D9):DT(E20) DT(D10):DA(E19) DT(D11):DA(E18) DT(D12):DA(E17) DT(D13):DA(E16) DG(D14):DC(E15) chainF ( 57) ASN211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 ( 58) SER212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 60) ARG214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 1 0 0 0 0 0 0 0 0 0 0 ( 61) HIS215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 15 12 0 0 0 0 0 0 0 ( 64) SER218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 prot.sequence srrnawgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdsnssagwkNSiRHnlSlhskfirvqnegtgksswwmlnp >3coa_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FOXO1 DBD BOUND TO IRE DNA organism=Homo sapiens DNA sequence DC(B13):DG(A12) DA(B14):DT(A11) DA(B15):DT(A10) DG(B16):DC(A9) DC(B17):DG(A8) DA(B18):DT(A7) DA(B19):DT(A6) DA(B20):DT(A5) DA(B21):DT(A4) DC(B22):DG(A3) DA(B23):DT(A2) DA(B24):DT(A1) DA(B25):DT(A-1) DC(B26):DG(A-2) DC(B27):DG(A-3) DA(B28):DT(A-4) chainC ( 56) ASN211 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 ( 57) SER212 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 59) ARG214 0 0 0 0 0 0 0 0 1 6 9 0 0 0 0 0 ( 60) HIS215 0 0 0 0 0 5 11 7 0 0 0 0 0 0 0 0 ( 63) SER218 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 ( 64) LEU219 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 prot.sequence rrnawgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdsnssagwkNSiRHnlSLhskfirvqnegtgksswwmlnp >3coq_A:Zn2/Cys6_DNA-binding_domain; title=STRUCTURAL BASIS FOR DIMERIZATION IN DNA RECOGNITION BY GAL4 organism=Saccharomyces cerevisiae DNA sequence DC(E22):DG(D20) DC(E23):DG(D19) DG(E24):DC(D18) DG(E25):DC(D17) DA(E26):DT(D16) DG(E27):DC(D15) DG(E28):DC(D14) DA(E29):DT(D13) DC(E30):DG(D12) DT(E31):DA(D11) DG(E32):DC(D10) DT(E33):DA(D9) DC(E34):DG(D8) DC(E35):DG(D7) DT(E36):DA(D6) DC(E37):DG(D5) DC(E38):DG(D4) DG(E39):DC(D3) DG(E40):DC(D2) chainA ( 11) LYS18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 14 11 0 ( 12) LEU19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence eqacdicrlkKLkcskekpkcakclknnwecryspktkrspltrahltevesrlerleqlfllifpredldmilkmdslqdikalltgl >3coq_AB:Zn2/Cys6_DNA-binding_domain; title=STRUCTURAL BASIS FOR DIMERIZATION IN DNA RECOGNITION BY GAL4 organism=Saccharomyces cerevisiae DNA sequence DC(D2):DG(E40) DC(D3):DG(E39) DG(D4):DC(E38) DG(D5):DC(E37) DA(D6):DT(E36) DG(D7):DC(E35) DG(D8):DC(E34) DA(D9):DT(E33) DC(D10):DG(E32) DA(D11):DT(E31) DG(D12):DC(E30) DT(D13):DA(E29) DC(D14):DG(E28) DC(D15):DG(E27) DT(D16):DA(E26) DC(D17):DG(E25) DC(D18):DG(E24) DG(D19):DC(E23) DG(D20):DC(E22) chainA ( 11) LYS18 0 11 14 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) LEU19 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 11) LYS18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 14 10 0 prot.sequence eqacdicrlkKLkcskekpkcakclknnwecryspktkrspltrahltevesrlerleqlfllifpredldmilkmdslqdikalltgl/eqacdicrlkKlkcskekpkcakclknnwecryspktkrspltrahltevesrlerleqlfllifpredldmilkmdslqdikalltgl >3cq8_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF THE L415F MUTANT RB69 EXO(-)POLYMERASE organism=Enterobacteria phage DNA sequence DG(P102):DC(T17) DC(P103):DG(T16) DG(P104):DC(T15) DG(P105):DC(T14) DA(P106):DT(T13) DC(P107):DG(T12) DT(P108):DA(T11) DG(P109):DC(T10) DC(P110):DG(T9) DT(P111):DA(T8) DT(P112):DA(T7) DA(P113):DT(T6) DC(P114):DG(T5) DC(P115):DG(T4) TTP(A1010):DA(T3) chainA (361) PRO361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (411) ASP411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (413) THR413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (415) PHE415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (482) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (486) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (560) LYS560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (561) LEU561 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (564) ASN564 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (565) SER565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (567) TYR567 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 (623) ASP623 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (706) LYS706 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 (734) LYS734 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 (800) LYS800 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsfypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkLlinSlYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygDTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfd >3cro_LR:lambda_repressor-like_DNA-binding_domains; title=THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION organism=PHAGE 434 DNA sequence DA(A2):DT(B20) DG(A3):DC(B19) DT(A4):DA(B18) DA(A5):DT(B17) DC(A6):DG(B16) DA(A7):DT(B15) DA(A8):DT(B14) DA(A9):DT(B13) DC(A10):DG(B12) DT(A11):DA(B11) DT(A12):DA(B10) DT(A13):DA(B9) DC(A14):DG(B8) DT(A15):DA(B7) DT(A16):DA(B6) DG(A17):DC(B5) DT(A18):DA(B4) DA(A19):DT(B3) DT(A20):DA(B2) chainL ( 20) THR18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 30) GLN28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 0 ( 31) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 8 6 0 0 ( 32) SER30 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 34) GLN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 ( 35) LEU33 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 45) ARG43 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 chainR ( 19) GLN17 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR18 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS27 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) GLN28 0 0 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) GLN29 0 0 0 8 12 15 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER30 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) GLN32 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LEU33 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR39 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mqtlserlkkrrialkmtqTelatkagvkQQSiQLieagvtkrpRflfeiamalncdpvwlqygtk/mqtlserlkkrrialkmtQTelatkagvKQQSiQLieagvTkrpRflfeiamalncdpvwlqyg >3cro_R:lambda_repressor-like_DNA-binding_domains; title=THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION organism=? DNA sequence DA(A2):DT(B20) DG(A3):DC(B19) DT(A4):DA(B18) DA(A5):DT(B17) DC(A6):DG(B16) DA(A7):DT(B15) DA(A8):DT(B14) DA(A9):DT(B13) DC(A10):DG(B12) DT(A11):DA(B11) DT(A12):DA(B10) DT(A13):DA(B9) DC(A14):DG(B8) DT(A15):DA(B7) DT(A16):DA(B6) DG(A17):DC(B5) DT(A18):DA(B4) DA(A19):DT(B3) DT(A20):DA(B2) chainR ( 19) GLN17 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR18 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS27 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) GLN28 0 0 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) GLN29 0 0 0 8 12 15 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER30 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) GLN32 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LEU33 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR39 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mqtlserlkkrrialkmtQTelatkagvKQQSiQLieagvTkrpRflfeiamalncdpvwlqyg >3crx_B:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRE RECOMBINASE/DNA COMPLEX INTERMEDIATE I organism=Enterobacteria phage P1 DNA sequence DA(C2):DT(D35) DT(C3):DA(D34) DA(C4):DT(D33) DA(C5):DT(D32) DG(C6):DC(D31) DT(C7):DA(D30) DT(C8):DA(D29) DC(C9):DG(D28) DG(C10):DC(D27) DT(C11):DA(D26) DA(C12):DT(D25) DT(C13):DA(D24) DA(C14):DT(D23) DG(C15):DC(D22) DC(C16):DG(D21) DA(C17):DT(D20) DT(C18):DA(D19) chainB ( 22) HIS40 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 ( 23) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 25) LYS43 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 ( 26) MET44 0 0 0 0 0 0 0 0 0 2 6 7 0 0 0 0 0 ( 29) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 68) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 ( 69) THR87 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 ( 72) GLN90 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 ( 76) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (223) ARG241 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ARG243 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS244 5 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER257 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 (241) ARG259 0 0 0 0 0 2 7 15 18 0 0 0 0 0 0 0 0 (244) GLU262 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 (264) ARG282 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 (299) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence tsdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllkiaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnldsetgamvrlled >3cvs_A:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:ADENINE BASE PAIR organism=Escherichia coli DNA sequence DG(E1):DC(F25) DA(E2):DT(F24) DC(E3):DG(F23) DA(E4):DT(F22) DT(E5):DA(F21) DG(E6):DC(F20) DA(E7):DT(F19) 8OG(E8):DA(F18) DT(E9):DA(F17) DG(E10):DC(F16) DC(E11):DG(F15) DC(E12):DG(F14) chainA (125) LEU125 7 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cvs_AB:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:ADENINE BASE PAIR organism=Escherichia coli DNA sequence DG(E1):DC(F25) DA(E2):DT(F24) DC(E3):DG(F23) DA(E4):DT(F22) DT(E5):DA(F21) DG(E6):DC(F20) DA(E7):DT(F19) 8OG(E8):DA(F18) DT(E9):DA(F17) DG(E10):DC(F16) DC(E11):DG(F15) DC(E12):DG(F14) chainA (125) LEU125 7 0 0 0 0 0 0 0 0 0 0 0 chainB (125) LEU125 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cvs_CD:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:ADENINE BASE PAIR organism=Escherichia coli DNA sequence DG(H14):DC(G12) DG(H15):DC(G11) DC(H16):DG(G10) DA(H17):DT(G9) DA(H18):8OG(G8) DT(H19):DA(G7) DC(H20):DG(G6) DA(H21):DT(G5) DT(H22):DA(G4) DG(H23):DC(G3) DT(H24):DA(G2) DC(H25):DG(G1) chainC (125) LEU125 4 0 0 0 0 0 0 0 0 0 0 0 chainD (125) LEU125 0 0 0 0 0 0 0 0 0 0 0 18 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cvt_A:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:CYTOSINE BASE PAIR organism=Escherichia coli DNA sequence DG(E1):DC(F25) DA(E2):DT(F24) DC(E3):DG(F23) DA(E4):DT(F22) DT(E5):DA(F21) 8OG(E6):DC(F20) DA(E7):DT(F19) DG(E8):DC(F18) DT(E9):DA(F17) DG(E10):DC(F16) DC(E11):DG(F15) DC(E12):DG(F14) chainA (125) LEU125 13 0 0 0 0 0 0 0 0 0 0 0 (178) ARG178 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkRaealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cvt_AB:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:CYTOSINE BASE PAIR organism=Escherichia coli DNA sequence DG(F14):DC(E12) DG(F15):DC(E11) DC(F16):DG(E10) DA(F17):DT(E9) DC(F18):DG(E8) DT(F19):DA(E7) DC(F20):8OG(E6) DA(F21):DT(E5) DT(F22):DA(E4) DG(F23):DC(E3) DT(F24):DA(E2) DC(F25):DG(E1) chainA (125) LEU125 0 0 0 0 0 0 0 0 0 0 0 13 (178) ARG178 0 0 0 0 0 0 0 0 0 0 0 2 chainB (125) LEU125 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkRaealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cvt_CD:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:CYTOSINE BASE PAIR organism=Escherichia coli DNA sequence DG(H14):DC(G12) DG(H15):DC(G11) DC(H16):DG(G10) DA(H17):DT(G9) DC(H18):DG(G8) DT(H19):DA(G7) DC(H20):8OG(G6) DA(H21):DT(G5) DT(H22):DA(G4) DG(H23):DC(G3) DT(H24):DA(G2) DC(H25):DG(G1) chainC (125) LEU125 3 0 0 0 0 0 0 0 0 0 0 0 chainD (125) LEU125 0 0 0 0 0 0 0 0 0 0 0 12 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cvu_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=DROSOPHILA MELANOGASTER (6-4) PHOTOLYASE BOUND TO DS DNA WITH A T-T (6-4) PHOTOLESION organism=DROSOPHILA MELANOGASTER DNA sequence DA(C1):DT(D14) DC(C2):DC(D13) DA(C3):DG(D12) DG(C4):DC(D11) DC(C5):DC(D10) DG(C6):DA(D9) DG(C7):DA(D8) DG(C10):DC(D7) DC(C11):DG(D6) DA(C12):DT(D5) DG(C13):DC(D4) DG(C14):DC(D3) DT(C15):DA(D2) chainA (413) HIS417 0 0 0 0 1 0 1 0 0 0 0 0 0 (414) GLN418 0 0 0 0 4 0 28 0 0 0 0 0 0 (416) PHE420 0 0 0 0 5 0 0 0 0 0 0 0 0 (417) ARG421 0 0 0 0 0 0 0 13 0 0 0 0 0 prot.sequence rstlvhwfrkglrlhdnpalshiftaanaapgryfvrpifildpgildwmqvganrwrflqqtledldnqlrklnsrlfvvrgkpaevfprifkswrvemltfetdiepysvtrdaavqklakaegvrvethcshtiynpelviaknlgkapityqkflgiveqlkvpkvlgvpeklknmptppkdeveqkdsaaydcptmkqlvkrpeelgpnkfpggetealrrmeeslkdeiwvarfekpntapnslepsttvlspylkfgclsarlfnqklkeiikrqpkhsqppvsligqlmwrefyytvaaaepnfdrmlgnvycmqipwqehpdhleawthgrtgypfidaimrqlrqegwihhlarhavacfltrgdlwisweegqrvfeqllldqdwalnagnwmwlsasaffHQyFRvyspvafgkktdpqghyirkyvpelskypagciyepwkaslvdqraygcvlgtdyphrivkhevvhkenikrmgaaykvnrevr >3cvv_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=DROSOPHILA MELANOGASTER (6-4) PHOTOLYASE BOUND TO DS DNA WITH A T-T (6-4) PHOTOLESION AND F0 COFACTOR organism=DROSOPHILA MELANOGASTER DNA sequence DA(D2):DT(C15) DC(D3):DG(C14) DC(D4):DG(C13) DT(D5):DA(C12) DG(D6):DC(C11) DC(D7):DG(C10) DA(D8):5PY(C9) DA(D9):64T(C8) DC(D10):DG(C7) DC(D11):DG(C6) DG(D12):DC(C5) DC(D13):DG(C4) DT(D14):DA(C3) DG(D15):DC(C2) chainA (260) LYS246 0 0 0 0 0 0 4 10 0 0 0 0 0 0 (261) PRO247 0 0 0 0 0 0 6 1 0 0 0 0 0 0 (307) PRO293 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (308) VAL294 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (313) GLN299 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (316) TRP302 0 0 0 0 0 0 0 19 0 0 0 0 0 0 (379) HIS365 0 0 0 0 0 0 8 17 0 0 0 0 0 0 (380) LEU366 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (383) HIS369 0 0 0 0 0 0 10 2 0 0 0 0 0 0 (420) ASN406 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (423) TRP409 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (431) HIS417 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (432) GLN418 0 0 0 0 0 0 0 0 34 0 0 0 0 0 (434) PHE420 0 0 0 0 0 22 15 0 0 0 0 0 0 0 (435) ARG421 0 0 0 0 0 30 0 0 0 0 0 0 0 0 (437) TYR423 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence ekgastslykkaglmdsqrstlvhwfrkglrlhdnpalshiftaanaapgryfvrpifildpgildwmqvganrwrflqqtledldnqlrklnsrlfvvrgkpaevfprifkswrvemltfetdiepysvtrdaavqklakaegvrvethcshtiynpelviaknlgkapityqkflgiveqlkvpkvlgvpeklknmptppkdeveqkdsaaydcptmkqlvkrpeelgpnkfpggetealrrmeeslkdeiwvarfekpntapnslepsttvlspylkfgclsarlfnqklkeiikrqpkhsqppvsligqlmwrefyytvaaaepnfdrmlgnvycmqipwqehpdhleawthgrtgypfidaimrqlrqegwihhlarhavacfltrgdlwisweegqrvfeqllldqdwalnagnwmwlsasaffHQyFRvyspvafgkktdpqghyirkyvpelskypagciyepwkaslvdqraygcvlgtdyphrivkhevvhkenikrmgaaykvnrevr >3cvw_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=DROSOPHILA MELANOGASTER (6-4) PHOTOLYASE H365N MUTANT BOUND TO DS DNA WITH A T-T (6-4) PHOTOLESION AND COFACTOR F0 organism=DROSOPHILA MELANOGASTER DNA sequence DC(C2):DG(D15) DA(C3):DT(D14) DG(C4):DC(D13) DC(C5):DG(D12) DG(C6):DC(D11) DG(C7):DC(D10) 64T(C8):DA(D9) 5PY(C9):DA(D8) DG(C10):DC(D7) DC(C11):DG(D6) DA(C12):DT(D5) DG(C13):DC(D4) DG(C14):DC(D3) DT(C15):DA(D2) chainA (243) LYS246 0 0 0 0 0 0 9 3 0 0 0 0 0 0 (244) PRO247 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (290) PRO293 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (296) GLN299 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (299) TRP302 0 0 0 0 0 0 19 0 0 0 0 0 0 0 (362) ASN365 0 0 0 0 0 0 8 1 0 0 0 0 0 0 (363) LEU366 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (366) HIS369 0 0 0 0 0 0 2 9 0 0 0 0 0 0 (406) TRP409 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (414) HIS417 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (415) GLN418 0 0 0 0 0 62 0 0 0 0 0 0 0 0 (417) PHE420 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (418) ARG421 0 0 0 0 0 0 0 0 13 0 0 0 0 0 (420) TYR423 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence qrstlvhwfrkglrlhdnpalshiftaanaapgryfvrpifildpgildwmqvganrwrflqqtledldnqlrklnsrlfvvrgkpaevfprifkswrvemltfetdiepysvtrdaavqklakaegvrvethcshtiynpelviaknlgkapityqkflgiveqlkvpkvlgvpeklknmptppkdeveqkdsaaydcptmkqlvkrpeelgpnkfpggetealrrmeeslkdeiwvarfekpntapnslepsttvlspylkfgclsarlfnqklkeiikrqpkhsqppvsligqlmwrefyytvaaaepnfdrmlgnvycmqipwqehpdhleawthgrtgypfidaimrqlrqegwihnlarhavacfltrgdlwisweegqrvfeqllldqdwalnagnwmwlsasaffHQyFRvyspvafgkktdpqghyirkyvpelskypagciyepwkaslvdqraygcvlgtdyphrivkhevvhkenikrmgaaykvnrevr >3cvx_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=DROSOPHILA MELANOGASTER (6-4) PHOTOLYASE H369M MUTANT BOUND TO DS DNA WITH A T-T (6-4) PHOTOLESION organism=DROSOPHILA MELANOGASTER DNA sequence DC(C2):DG(D15) DA(C3):DT(D14) DG(C4):DC(D13) DC(C5):DG(D12) DG(C6):DC(D11) DG(C7):DC(D10) 64T(C8):DA(D9) 5PY(C9):DA(D8) DG(C10):DC(D7) DC(C11):DG(D6) DA(C12):DT(D5) DG(C13):DC(D4) DG(C14):DC(D3) DT(C15):DA(D2) chainA (243) LYS246 0 0 0 0 0 0 11 4 0 0 0 0 0 0 (244) PRO247 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (290) PRO293 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (296) GLN299 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (299) TRP302 0 0 0 0 0 0 19 0 0 0 0 0 0 0 (303) TYR306 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (362) HIS365 0 0 0 0 0 0 17 13 0 0 0 0 0 0 (363) LEU366 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (366) MET369 0 0 0 0 0 0 1 6 0 0 0 0 0 0 (403) ASN406 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (406) TRP409 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (414) HIS417 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (415) GLN418 0 0 0 0 0 64 1 0 0 0 0 0 0 0 (417) PHE420 0 0 0 0 0 0 0 10 17 0 0 0 0 0 (418) ARG421 0 0 0 0 0 0 0 0 13 0 0 0 0 0 (420) TYR423 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence qrstlvhwfrkglrlhdnpalshiftaanaapgryfvrpifildpgildwmqvganrwrflqqtledldnqlrklnsrlfvvrgkpaevfprifkswrvemltfetdiepysvtrdaavqklakaegvrvethcshtiynpelviaknlgkapityqkflgiveqlkvpkvlgvpeklknmptppkdeveqkdsaaydcptmkqlvkrpeelgpnkfpggetealrrmeeslkdeiwvarfekpntapnslepsttvlspylkfgclsarlfnqklkeiikrqpkhsqppvsligqlmwrefyytvaaaepnfdrmlgnvycmqipwqehpdhleawthgrtgypfidaimrqlrqegwihhlarmavacfltrgdlwisweegqrvfeqllldqdwalnagnwmwlsasaffHQyFRvyspvafgkktdpqghyirkyvpelskypagciyepwkaslvdqraygcvlgtdyphrivkhevvhkenikrmgaaykvnrevr >3cvy_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=DROSOPHILA MELANOGASTER (6-4) PHOTOLYASE BOUND TO REPAIRED DS DNA organism=DROSOPHILA MELANOGASTER DNA sequence DA(D2):DT(C15) DC(D3):DG(C14) DC(D4):DG(C13) DT(D5):DA(C12) DG(D6):DC(C11) DC(D7):DG(C10) DA(D8):DT(C9) DA(D9):DT(C8) DC(D10):DG(C7) DC(D11):DG(C6) DG(D12):DC(C5) DC(D13):DG(C4) DT(D14):DA(C3) DG(D15):DC(C2) chainA (242) LYS246 0 0 0 0 0 0 4 7 0 0 0 0 0 0 (243) PRO247 0 0 0 0 0 0 7 2 0 0 0 0 0 0 (289) PRO293 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (290) VAL294 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (295) GLN299 0 0 0 0 0 0 0 13 0 0 0 0 0 0 (298) TRP302 0 0 0 0 0 0 0 36 0 0 0 0 0 0 (302) TYR306 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (361) HIS365 0 0 0 0 0 0 10 7 0 0 0 0 0 0 (362) LEU366 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (365) HIS369 0 0 0 0 0 0 12 0 0 0 0 0 0 0 (405) TRP409 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (413) HIS417 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (414) GLN418 0 0 0 0 0 0 0 0 37 0 0 0 0 0 (416) PHE420 0 0 0 0 0 0 0 0 10 0 0 0 0 0 (417) ARG421 0 0 0 0 0 28 0 0 0 0 0 0 0 0 (419) TYR423 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence rstlvhwfrkglrlhdnpalshiftaanaapgryfvrpifildpgildwmqvganrwrflqqtledldnqlrklnsrlfvvrgkpaevfprifkswrvemltfetdiepysvtrdaavqklakaegvrvethcshtiynpelviaknlgkapityqkflgiveqlkvpkvlgvpeklknmptppkdeveqkdsaaydcptmkqlvkrpeelgpnkfpggetealrrmeeslkdeiwvarfeKPntapnslepsttvlspylkfgclsarlfnqklkeiikrqpkhsqpPVsligQlmWrefYytvaaaepnfdrmlgnvycmqipwqehpdhleawthgrtgypfidaimrqlrqegwihHLarHavacfltrgdlwisweegqrvfeqllldqdwalnagnwmWlsasaffHQyFRvYspvafgkktdpqghyirkyvpelskypagciyepwkaslvdqraygcvlgtdyphrivkhevvhkenikrmgaaykvnrevr >3cw7_AB:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:CYTOSINE BASE PAIR organism=Escherichia coli DNA sequence DG(F14):DC(E12) DG(F15):DC(E11) DC(F16):DG(E10) DA(F17):DT(E9) DC(F18):8OG(E8) DT(F19):DA(E7) DC(F20):DG(E6) DA(F21):DT(E5) DT(F22):DA(E4) DG(F23):DC(E3) DT(F24):DA(E2) DC(F25):DG(E1) chainA (125) LEU125 0 0 0 0 0 0 0 0 0 0 0 3 chainB (125) LEU125 11 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cw7_C:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:CYTOSINE BASE PAIR organism=Escherichia coli DNA sequence DG(H14):DC(G12) DG(H15):DC(G11) DC(H16):DG(G10) DA(H17):DT(G9) DC(H18):8OG(G8) DT(H19):DA(G7) DC(H20):DG(G6) DA(H21):DT(G5) DT(H22):DA(G4) DG(H23):DC(G3) DT(H24):DA(G2) DC(H25):DG(G1) chainC (125) LEU125 4 0 0 0 0 0 0 0 0 0 0 0 (177) LYS177 10 3 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplKraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cw7_CD:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:CYTOSINE BASE PAIR organism=Escherichia coli DNA sequence DG(G1):DC(H25) DA(G2):DT(H24) DC(G3):DG(H23) DA(G4):DT(H22) DT(G5):DA(H21) DG(G6):DC(H20) DA(G7):DT(H19) 8OG(G8):DC(H18) DT(G9):DA(H17) DG(G10):DC(H16) DC(G11):DG(H15) DC(G12):DG(H14) chainC (125) LEU125 0 0 0 0 0 0 0 0 0 0 0 4 (177) LYS177 0 0 0 0 0 0 0 0 0 0 3 10 chainD (125) LEU125 15 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplKraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cwa_AB:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:CYTOSINE BASE PAIR organism=Escherichia coli DNA sequence DG(F14):DC(E12) DG(F15):DC(E11) DC(F16):DG(E10) DA(F17):DT(E9) DC(F18):DG(E8) DT(F19):DA(E7) DC(F20):DG(E6) DA(F21):DT(E5) DT(F22):DA(E4) DG(F23):DC(E3) DT(F24):DA(E2) chainA chainB (125) LEU125 17 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqlvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cwa_CD:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:CYTOSINE BASE PAIR organism=Escherichia coli DNA sequence DG(H14):DC(G12) DG(H15):DC(G11) DC(H16):DG(G10) DA(H17):DT(G9) DC(H18):DG(G8) DT(H19):DA(G7) DC(H20):DG(G6) DA(H21):DT(G5) DT(H22):DA(G4) DG(H23):DC(G3) DT(H24):DA(G2) chainC (125) LEU125 3 0 0 0 0 0 0 0 0 0 0 (177) LYS177 10 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplKraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplKraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cws_A:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 2'-FLUORO-2'- DEOXYINOSINE:THYMINE BASE PAIR organism=Escherichia coli DNA sequence DG(E1):DC(F25) DA(E2):DT(F24) DC(E3):DG(F23) DA(E4):DT(F22) DT(E5):DA(F21) DG(E6):DC(F20) DA(E7):DT(F19) 2FI(E8):DT(F18) DT(E9):DA(F17) DG(E10):DC(F16) DC(E11):DG(F15) DC(E12):DG(F14) chainA (125) LEU125 7 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cws_AB:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 2'-FLUORO-2'- DEOXYINOSINE:THYMINE BASE PAIR organism=Escherichia coli DNA sequence DG(F14):DC(E12) DG(F15):DC(E11) DC(F16):DG(E10) DA(F17):DT(E9) DT(F18):2FI(E8) DT(F19):DA(E7) DC(F20):DG(E6) DA(F21):DT(E5) DT(F22):DA(E4) DG(F23):DC(E3) DT(F24):DA(E2) DC(F25):DG(E1) chainA (125) LEU125 0 0 0 0 0 0 0 0 0 0 0 7 chainB (125) LEU125 13 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cws_CD:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 2'-FLUORO-2'- DEOXYINOSINE:THYMINE BASE PAIR organism=Escherichia coli DNA sequence DG(G1):DC(H25) DA(G2):DT(H24) DC(G3):DG(H23) DA(G4):DT(H22) DT(G5):DA(H21) DG(G6):DC(H20) DA(G7):DT(H19) 2FI(G8):DT(H18) DT(G9):DA(H17) DG(G10):DC(H16) DC(G11):DG(H15) DC(G12):DG(H14) chainC (125) LEU125 0 0 0 0 0 0 0 0 0 0 0 5 chainD (125) LEU125 15 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpde/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpde >3cwt_AB:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 2'-FLUORO-2'- DEOXYINOSINE:ADENINE BASE PAIR organism=Escherichia coli DNA sequence DG(E1):DC(F25) DA(E2):DT(F24) DC(E3):DG(F23) DA(E4):DT(F22) DT(E5):DA(F21) DG(E6):DC(F20) DA(E7):DT(F19) 2FI(E8):DA(F18) DT(E9):DA(F17) DG(E10):DC(F16) DC(E11):DG(F15) DC(E12):DG(F14) chainA (125) LEU125 9 0 0 0 0 0 0 0 0 0 0 0 chainB (125) LEU125 0 0 0 0 0 0 0 0 0 0 0 11 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpde >3cwt_CD:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 2'-FLUORO-2'- DEOXYINOSINE:ADENINE BASE PAIR organism=Escherichia coli DNA sequence DG(G1):DC(H25) DA(G2):DT(H24) DC(G3):DG(H23) DA(G4):DT(H22) DT(G5):DA(H21) DG(G6):DC(H20) DA(G7):DT(H19) 2FI(G8):DA(H18) DT(G9):DA(H17) DG(G10):DC(H16) DC(G11):DG(H15) DC(G12):DG(H14) chainC (125) LEU125 0 0 0 0 0 0 0 0 0 0 0 3 chainD (125) LEU125 14 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpde >3cwt_D:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 2'-FLUORO-2'- DEOXYINOSINE:ADENINE BASE PAIR organism=Escherichia coli DNA sequence DG(G1):DC(H25) DA(G2):DT(H24) DC(G3):DG(H23) DA(G4):DT(H22) DT(G5):DA(H21) DG(G6):DC(H20) DA(G7):DT(H19) 2FI(G8):DA(H18) DT(G9):DA(H17) DG(G10):DC(H16) DC(G11):DG(H15) DC(G12):DG(H14) chainD (125) LEU125 14 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpde >3cwu_AB:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 2'-FLUORO-2'-DEOXY- 1,N6-ETHENOADENINE:THYMINE BASE PAIR organism=Escherichia coli DNA sequence DG(F14):DC(E12) DG(F15):DC(E11) DC(F16):DG(E10) DA(F17):DT(E9) DT(F18):2FE(E8) DT(F19):DA(E7) DC(F20):DG(E6) DA(F21):DT(E5) DT(F22):DA(E4) DG(F23):DC(E3) DT(F24):DA(E2) DC(F25):DG(E1) chainA (125) LEU125 0 0 0 0 0 0 0 0 0 0 0 8 chainB (125) LEU125 11 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cwu_CD:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 2'-FLUORO-2'-DEOXY- 1,N6-ETHENOADENINE:THYMINE BASE PAIR organism=Escherichia coli DNA sequence DG(H14):DC(G12) DG(H15):DC(G11) DC(H16):DG(G10) DA(H17):DT(G9) DT(H19):DA(G7) DC(H20):DG(G6) DA(H21):DT(G5) DT(H22):DA(G4) DG(H23):DC(G3) DT(H24):DA(G2) DC(H25):DG(G1) chainC (125) LEU125 11 0 0 0 0 0 0 0 0 0 0 chainD (125) LEU125 0 0 0 0 0 0 0 0 0 0 23 (178) ARG178 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkRaealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3cwu_D:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 2'-FLUORO-2'-DEOXY- 1,N6-ETHENOADENINE:THYMINE BASE PAIR organism=Escherichia coli DNA sequence DG(H14):DC(G12) DG(H15):DC(G11) DC(H16):DG(G10) DA(H17):DT(G9) DT(H19):DA(G7) DC(H20):DG(G6) DA(H21):DT(G5) DT(H22):DA(G4) DG(H23):DC(G3) DT(H24):DA(G2) DC(H25):DG(G1) chainD (125) LEU125 0 0 0 0 0 0 0 0 0 0 23 (178) ARG178 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkRaealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3d0a_AC: title=HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R249S AND SECOND SITE SUPPRESSOR MUTATION H168R IN SEQUENCE-SPECIFIC COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(F3):DC(E10) DG(F4):DC(E9) DC(F5):DG(E8) DA(F6):DT(E7) DT(F7):DA(E6) DG(F8):DC(E5) DC(F9):DG(E4) DC(F10):DG(E3) DC(F11):DG(E2) DG(F12):DC(E1) DC(H1):DG(G12) DG(H2):DC(G11) DG(H3):DC(G10) DG(H4):DC(G9) DC(H5):DG(G8) DA(H6):DT(G7) DT(H7):DA(G6) DG(H8):DC(G5) DC(H9):DG(G4) DC(H10):DG(G3) DC(H11):DG(G2) DG(H12):DC(G1) chainA ( 25) LYS120 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) SER121 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR123 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 44) LYS139 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (180) ALA276 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) CYS277 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ARG280 0 0 0 0 15 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 25) LYS120 0 0 0 0 0 0 0 0 0 0 0 1 8 7 0 0 0 0 0 0 0 0 (181) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 13 0 0 0 0 0 0 prot.sequence svpsqktyqgsygfrlgflhsgtaKSvTctyspalnkmfcQlaKtcpvqlwvdstpppgtrvramaiykqsqrmtevvrrcphhercdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrspiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk/svpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqrmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrspiltiitledssgnllgrnsfevrvcACpgRdrrteeen >3d0a_C:p53-like_transcription_factors; title=HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R249S AND SECOND SITE SUPPRESSOR MUTATION H168R IN SEQUENCE-SPECIFIC COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(F3):DC(E10) DG(F4):DC(E9) DC(F5):DG(E8) DA(F6):DT(E7) DT(F7):DA(E6) DG(F8):DC(E5) DC(F9):DG(E4) DC(F10):DG(E3) DC(F11):DG(E2) DG(F12):DC(E1) DC(H1):DG(G12) DG(H2):DC(G11) DG(H3):DC(G10) DG(H4):DC(G9) DC(H5):DG(G8) DA(H6):DT(G7) DT(H7):DA(G6) DG(H8):DC(G5) DC(H9):DG(G4) DC(H10):DG(G3) DC(H11):DG(G2) DG(H12):DC(G1) chainC ( 25) LYS120 0 0 0 0 0 0 0 0 0 0 0 1 8 7 0 0 0 0 0 0 0 0 (181) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 13 0 0 0 0 0 0 prot.sequence svpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqrmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrspiltiitledssgnllgrnsfevrvcACpgRdrrteeen >3d0p_A:Ribonuclease_H-like; title=INSIGHTS INTO RNA/DNA HYBRID RECOGNITION AND PROCESSING BY RNASE H FROM THE CRYSTAL STRUCTURE OF A NON-SPECIFIC ENZYME-DSDNA COMPLEX organism=? DNA sequence DC(B1) DG(B2) DC(B3) DG(B4) DA(B5) DA(B6) DT(B7) DT(B8) DC(B9) DG(B10) DC(B11) DG(B12) chainA ( 17) ASN77 0 0 0 0 0 0 0 0 0 0 0 1 ( 45) ASN105 0 0 0 0 0 0 0 0 0 1 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsqtaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadyg >3d1n_IK:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=STRUCTURE OF HUMAN BRN-5 TRANSCRIPTION FACTOR IN COMPLEX WITH CORTICOTROPHIN-RELEASING HORMONE GENE PROMOTER organism=Homo sapiens DNA sequence DA(A1):DT(B14) DG(A2):DC(B13) DC(A3):DG(B12) DA(A4):DT(B11) DT(A5):DA(B10) DA(A6):DT(B9) DA(A7):DT(B8) DA(A8):DT(B7) DT(A9):DA(B6) DA(A10):DT(B5) DA(A11):DT(B4) DT(A12):DA(B3) DA(A13):DT(B2) DA(A14):DT(B1) DT(D1):DA(C14) DT(D2):DA(C13) DA(D3):DT(C12) DT(D4):DA(C11) DT(D5):DA(C10) DA(D6):DT(C9) DT(D7):DA(C8) DT(D8):DA(C7) DT(D9):DA(C6) DA(D10):DT(C5) DT(D11):DA(C4) DG(D12):DC(C3) DC(D13):DG(C2) DT(D14):DA(C1) chainI ( 23) GLN165 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER181 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN182 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER183 0 0 0 0 0 0 0 0 0 0 0 8 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) SER186 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG235 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG238 0 0 0 10 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) VAL280 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) ASN284 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) GLN287 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 23) GLN165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 39) SER181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 ( 41) SER183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 ( 44) SER186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 45) ARG187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 ( 96) ARG238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 (137) ARG279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (138) VAL280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (145) GLN287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence nmeeirefaknfkirrlslgltQtqvgqamtategpaySQSaiSrfeklditpksaqklkpvlekwlneaelrnqegqqnlmefvggepskkRkrRtsftpqaiealnayfeknplptgqeitemakelnydrevvrVwfsNrrQtlknt/nmeeirefaknfkirrlslgltQtqvgqamtategpaySQSaiSRfeklditpksaqklkpvlekwlneaelrnqegqqnlmefvggepskkRkrRtsftpqaiealnayfeknplptgqeitemakelnydrevvRVwfsnrrQtlknt >3d1n_M:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=STRUCTURE OF HUMAN BRN-5 TRANSCRIPTION FACTOR IN COMPLEX WITH CORTICOTROPHIN-RELEASING HORMONE GENE PROMOTER organism=Homo sapiens DNA sequence DA(E1):DT(F14) DG(E2):DC(F13) DC(E3):DG(F12) DA(E4):DT(F11) DT(E5):DA(F10) DA(E6):DT(F9) DA(E7):DT(F8) DA(E8):DT(F7) DT(E9):DA(F6) DA(E10):DT(F5) DA(E11):DT(F4) DT(E12):DA(F3) DA(E13):DT(F2) DA(E14):DT(F1) DT(H1):DA(G14) DT(H2):DA(G13) DA(H3):DT(G12) DT(H4):DA(G11) DT(H5):DA(G10) DA(H6):DT(G9) DT(H7):DA(G8) DT(H8):DA(G7) DT(H9):DA(G6) DA(H10):DT(G5) DT(H11):DA(G4) DG(H12):DC(G3) DC(H13):DG(G2) DT(H14):DA(G1) chainM ( 23) GLN165 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER181 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN182 0 0 0 0 0 0 0 0 0 8 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER183 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) SER186 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG187 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG235 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG238 0 0 0 12 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) VAL280 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) ASN284 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) GLN287 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nmeeirefaknfkirrlslgltQtqvgqamtategpaySQSaiSRfeklditpksaqklkpvlekwlneaelrnqegqqnlmefvggepskkRkrRtsftpqaiealnayfeknplptgqeitemakelnydrevvrVwfsNrrQtlknt >3d1n_MO:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=STRUCTURE OF HUMAN BRN-5 TRANSCRIPTION FACTOR IN COMPLEX WITH CORTICOTROPHIN-RELEASING HORMONE GENE PROMOTER organism=Homo sapiens DNA sequence DA(E1):DT(F14) DG(E2):DC(F13) DC(E3):DG(F12) DA(E4):DT(F11) DT(E5):DA(F10) DA(E6):DT(F9) DA(E7):DT(F8) DA(E8):DT(F7) DT(E9):DA(F6) DA(E10):DT(F5) DA(E11):DT(F4) DT(E12):DA(F3) DA(E13):DT(F2) DA(E14):DT(F1) DT(H1):DA(G14) DT(H2):DA(G13) DA(H3):DT(G12) DT(H4):DA(G11) DT(H5):DA(G10) DA(H6):DT(G9) DT(H7):DA(G8) DT(H8):DA(G7) DT(H9):DA(G6) DA(H10):DT(G5) DT(H11):DA(G4) DG(H12):DC(G3) DC(H13):DG(G2) DT(H14):DA(G1) chainM ( 23) GLN165 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER181 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN182 0 0 0 0 0 0 0 0 0 8 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER183 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) SER186 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG187 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG235 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG238 0 0 0 12 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) VAL280 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) ASN284 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) GLN287 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 23) GLN165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 39) SER181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 ( 41) SER183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 7 0 0 0 0 0 0 0 0 0 0 0 ( 44) SER186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 ( 45) ARG187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 96) ARG238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 10 0 0 0 (138) VAL280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (142) ASN284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 (145) GLN287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 prot.sequence nmeeirefaknfkirrlslgltQtqvgqamtategpaySQSaiSRfeklditpksaqklkpvlekwlneaelrnqegqqnlmefvggepskkRkrRtsftpqaiealnayfeknplptgqeitemakelnydrevvrVwfsNrrQtlknt/nmeeirefaknfkirrlslgltQtqvgqamtategpaySQSaiSRfeklditpksaqklkpvlekwlneaelrnqegqqnlmefvggepskkRkrRtsftpqaiealnayfeknplptgqeitemakelnydrevvrVwfsNrrQtlknt >3d4v_A:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX N7METHYLGUANINE:CYTOSINE BASE PAIR organism=Escherichia coli DNA sequence DG(E1):DC(F25) DA(E2):DT(F24) DC(E3):DG(F23) DA(E4):DT(F22) DT(E5):DA(F21) DG(E6):DC(F20) DA(E7):DT(F19) FMG(E8):DC(F18) DT(E9):DA(F17) DG(E10):DC(F16) DC(E11):DG(F15) DC(E12):DG(F14) chainA (125) LEU125 12 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3d4v_AB:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX N7METHYLGUANINE:CYTOSINE BASE PAIR organism=Escherichia coli DNA sequence DG(F14):DC(E12) DG(F15):DC(E11) DC(F16):DG(E10) DA(F17):DT(E9) DC(F18):FMG(E8) DT(F19):DA(E7) DC(F20):DG(E6) DA(F21):DT(E5) DT(F22):DA(E4) DG(F23):DC(E3) DT(F24):DA(E2) DC(F25):DG(E1) chainA (125) LEU125 0 0 0 0 0 0 0 0 0 0 0 12 chainB (125) LEU125 11 0 0 0 0 0 0 0 0 0 0 0 (177) LYS177 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplKraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpdea >3d4v_CD:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX N7METHYLGUANINE:CYTOSINE BASE PAIR organism=Escherichia coli DNA sequence DG(G1):DC(H25) DA(G2):DT(H24) DC(G3):DG(H23) DA(G4):DT(H22) DT(G5):DA(H21) DG(G6):DC(H20) DA(G7):DT(H19) FMG(G8):DC(H18) DT(G9):DA(H17) DG(G10):DC(H16) DC(G11):DG(H15) DC(G12):DG(H14) chainC (125) LEU125 0 0 0 0 0 0 0 0 0 0 0 3 chainD (125) LEU125 18 0 0 0 0 0 0 0 0 0 0 0 (178) ARG178 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpde/mytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkRaealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpde >3d6y_A:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF R275E MUTANT OF BMRR BOUND TO DNA AND BERBERINE organism=Bacillus subtilis DNA sequence DT(B-13) DG(B-12) DA(B-11) DC(B-10) DC(B-9) DC(B-8) DT(B-7) DC(B-6) DC(B-5) DC(B-4) DC(B-3) DT(B-2) DT(B1) DA(B2) DG(B3) DG(B4) DG(B5) DG(B6) DA(B7) DG(B8) DG(B9) DG(B10) DT(B11) DC(B12) chainA ( 19) LYS20 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kesyysigevsklanvsiKalRyydkidlfkpayvdpdtsYryytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaegigpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkieild >3d6z_A:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF R275E MUTANT OF BMRR BOUND TO DNA AND RHODAMINE organism=Bacillus subtilis DNA sequence DT(B-13) DG(B-12) DA(B-11) DC(B-10) DC(B-9) DC(B-8) DT(B-7) DC(B-6) DC(B-5) DC(B-4) DC(B-3) DT(B-2) DT(B1) DA(B2) DG(B3) DG(B4) DG(B5) DG(B6) DA(B7) DG(B8) DG(B9) DG(B10) DT(B11) DC(B12) chainA ( 19) LYS20 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kesyysigevsklanvsiKalRyydkidlfkpayvdpdtsYryytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaegigpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkieild >3d70_A:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF E253A MUTANT OF BMRR BOUND TO 22-BP OLIGONUCLEOTIDE organism=SYNTHETIC CONSTRUCT DNA sequence DG(B-12) DA(B-11) DC(B-10) DC(B-9) DC(B-8) DT(B-7) DC(B-6) DC(B-5) DC(B-4) DC(B-3) DT(B-2) DT(B1) DA(B2) DG(B3) DG(B4) DG(B5) DG(B6) DA(B7) DG(B8) DG(B9) DG(B10) DT(B11) DC(B12) chainA ( 19) LYS20 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kesyysigevsklanvsiKalRyydkidlfkpayvdpdtsYryytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaegigpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyaliipihyspkkqeeyrvemkiril >3d71_A:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF E253Q BMRR BOUND TO 22 BASE PAIR PROMOTER SITE organism=Bacillus subtilis DNA sequence DG(M-12) DA(M-11) DC(M-10) DC(M-9) DC(M-8) DT(M-7) DC(M-6) DC(M-5) DC(M-4) DC(M-3) DT(M-2) DT(M1) DA(M2) DG(M3) DG(M4) DG(M5) DG(M6) DA(M7) DG(M8) DG(M9) DG(M10) DT(M11) DC(M12) chainA ( 22) ARG23 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kesyysigevsklanvsikalRyydkidlfkpayvdpdtsYryytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaegigpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyqliipihyspkkqeeyrvemkirild >3dfv_CD:Glucocorticoid_receptor-like_DNA-binding_domain; title=ADJACENT GATA DNA BINDING organism=Mus musculus DNA sequence DG(Z3):DC(Y20) DC(Z4):DG(Y19) DA(Z5):DT(Y18) DG(Z6):DC(Y17) DA(Z7):DT(Y16) DT(Z8):DA(Y15) DA(Z9):DT(Y14) DA(Z10):DT(Y13) DG(Z11):DC(Y12) DT(Z12):DA(Y11) DC(Z13):DG(Y10) DT(Z14):DA(Y9) DT(Z15):DA(Y8) DA(Z16):DT(Y7) DT(Z17):DA(Y6) DC(Z18):DG(Y5) DA(Z19):DT(Y4) DG(Z20):DC(Y3) chainD ( 17) LEU327 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG329 0 0 2 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN339 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) LEU343 0 0 0 0 0 5 12 0 0 0 0 0 0 0 0 0 0 0 ( 36) LYS346 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LEU347 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 54) ARG364 0 0 0 0 0 9 6 7 0 0 0 0 0 0 0 0 0 0 ( 56) ARG366 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 17) LEU327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 2 ( 19) ARG329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 4 0 ( 29) ASN339 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 ( 33) LEU343 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 ( 36) LYS346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 37) LEU347 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 54) ARG364 0 0 0 0 0 0 0 0 0 0 0 9 5 10 0 0 0 0 ( 56) ARG366 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 prot.sequence rragtscancqtttttLwRrnangdpvcNacgLyyKLhninrpltmkkegiqtRnR/rragtscancqtttttLwRrnangdpvcNacgLyyKLhninrpltmkkegiqtRnR >3dfv_D:Glucocorticoid_receptor-like_DNA-binding_domain; title=ADJACENT GATA DNA BINDING organism=Mus musculus DNA sequence DC(Y3):DG(Z20) DT(Y4):DA(Z19) DG(Y5):DC(Z18) DA(Y6):DT(Z17) DT(Y7):DA(Z16) DA(Y8):DT(Z15) DA(Y9):DT(Z14) DG(Y10):DC(Z13) DA(Y11):DT(Z12) DC(Y12):DG(Z11) DT(Y13):DA(Z10) DT(Y14):DA(Z9) DA(Y15):DT(Z8) DT(Y16):DA(Z7) DC(Y17):DG(Z6) DT(Y18):DA(Z5) DG(Y19):DC(Z4) DC(Y20):DG(Z3) chainD ( 17) LEU327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 ( 19) ARG329 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 2 0 0 ( 29) ASN339 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 ( 33) LEU343 0 0 0 0 0 0 0 0 0 0 0 12 5 0 0 0 0 0 ( 36) LYS346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 37) LEU347 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 54) ARG364 0 0 0 0 0 0 0 0 0 0 7 6 9 0 0 0 0 0 ( 56) ARG366 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 prot.sequence rragtscancqtttttLwRrnangdpvcNacgLyyKLhninrpltmkkegiqtRnR >3dfx_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=OPPOSITE GATA DNA BINDING organism=Mus musculus DNA sequence DG(Y3):DC(X20) DG(Y4):DC(X19) DT(Y5):DA(X18) DT(Y6):DA(X17) DA(Y7):DT(X16) DT(Y8):DA(X15) DC(Y9):DG(X14) DT(Y10):DA(X13) DC(Y11):DG(X12) DT(Y12):DA(X11) DG(Y13):DC(X10) DA(Y14):DT(X9) DT(Y15):DA(X8) DT(Y16):DA(X7) DT(Y17):DA(X6) DA(Y18):DT(X5) DT(Y19):DA(X4) DC(Y20):DG(X3) chainA ( 19) THR326 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 20) LEU327 0 0 0 0 0 0 0 0 3 6 2 2 0 0 0 0 0 0 ( 22) ARG329 0 0 0 0 0 0 0 0 0 6 10 2 0 0 0 0 0 0 ( 32) ASN339 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 ( 36) LEU343 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 ( 57) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 10 13 9 0 0 0 chainB ( 19) THR326 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LEU327 0 0 0 0 0 3 2 4 3 0 0 0 0 0 0 0 0 0 ( 22) ARG329 0 0 0 0 0 5 10 2 0 0 0 0 0 0 0 0 0 0 ( 32) ASN339 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) LEU343 0 0 0 6 4 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LEU347 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG364 0 0 14 8 13 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence saarragtscancqttttTLwRrnangdpvcNacgLyyklhninrpltmkkegiqtRn/saarragtscancqttttTLwRrnangdpvcNacgLyykLhninrpltmkkegiqtRn >3dfx_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=OPPOSITE GATA DNA BINDING organism=Mus musculus DNA sequence DG(X3):DC(Y20) DA(X4):DT(Y19) DT(X5):DA(Y18) DA(X6):DT(Y17) DA(X7):DT(Y16) DA(X8):DT(Y15) DT(X9):DA(Y14) DC(X10):DG(Y13) DA(X11):DT(Y12) DG(X12):DC(Y11) DA(X13):DT(Y10) DG(X14):DC(Y9) DA(X15):DT(Y8) DT(X16):DA(Y7) DA(X17):DT(Y6) DA(X18):DT(Y5) DC(X19):DG(Y4) DC(X20):DG(Y3) chainB ( 19) THR326 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 20) LEU327 0 0 0 0 0 0 0 0 0 3 4 2 3 0 0 0 0 0 ( 22) ARG329 0 0 0 0 0 0 0 0 0 0 2 10 5 0 0 0 0 0 ( 32) ASN339 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 ( 36) LEU343 0 0 0 0 0 0 0 0 0 0 0 0 3 4 6 0 0 0 ( 40) LEU347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 57) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 13 8 14 0 0 prot.sequence saarragtscancqttttTLwRrnangdpvcNacgLyykLhninrpltmkkegiqtRn >3dlh_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE GUIDE-STRAND-CONTAINING ARGONAUTE PROTEIN SILENCING COMPLEX organism=THERMUS THERMOPHILUS DNA sequence DT(X1) DG(X2) DA(X3) DG(X4) DG(X5) DT(X6) DA(X7) DG(X8) DT(X9) DA(X10) DG(X11) DG(X12) DA(X17) DT(X18) DA(X19) DG(X20) DT(X21) chainA (128) GLU130 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (170) ARG172 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (215) LEU217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (216) PRO218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (224) TYR226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (244) ASP246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (250) LYS252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 (252) ILE254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 (253) PRO255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (264) THR266 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (265) LEU267 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 (275) SER280 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (408) MET413 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (410) TRP415 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) ARG418 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) ILE434 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (431) ASN436 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) HIS445 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) ARG446 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ASN449 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (536) ARG548 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 (564) SER576 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (598) PHE610 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (603) ARG615 0 0 0 0 0 4 6 6 0 0 0 0 0 0 0 0 0 (635) PHE647 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hlgktevflnrfalrplnpeelrpwrlevvldpppgreevypllaqvarraggvtvrmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwvEglavyrrehargpgwrvlggavldlwvsdsgafllevdpayRilcemsleawlaqghplpkrvrnaydrRtwellrlgeedpkelpLPgglslldYhaskgrlqgreggrvawvaDpkdprKpIPhltgllvpvlTLedlheslalSlpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppMaWedRnrlkalllreglpsqIlNvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavggghllwtlperipqevvwdlleetlwafrrkagrlpsrvlllrdgRvpqdefalalealaregiaydlvsvrkSgggrvypvqgrladglyvpledktfllltvhrdFrgtpRplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >3dnv_AB:lambda_repressor-like_DNA-binding_domains; title=MDT PROTEIN organism=ESCHERICHIA COLI DNA sequence DA(T699) DC(T700) DT(T701) DA(T702) DT(T703) DC(T704) DC(T705) DC(T706) DC(T707) DT(T708) DT(T709) DA(T710) DA(T711) DG(T712) DG(T713) DG(T714) DG(T715) DA(T716) DT(T717) DA(T718) DG(T719) chainA chainB ( 26) SER29 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 0 12 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pklvtwmnnqrvgeltklangahtfkyapewlasryarplslslplqrgnitsdavfnffdnllpdspivrdrivkryhaksrqpfdllseigrdsvgavtlipedetvthpimawekltearleevltaykadfrisvagaqektallrigndwcipkgitptthiiklpilsqsvdneyyclllakelglnvpdaeiikagnvralaverfdrrwnaertvllrlpqedmcqtfglpssvkyesdggpgiarimaflmgssealkdrydfmkfqvfqwligatqghaknfsvfiqaggsyrltpfydiisafpvlggtgihisdlklamglnaskgkktaidkiyprhflatakvlrfpevqmheilsdfarmipaaldnvktslptdfpenvvtavesnvlrlhgrlsrey/fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak >3dnv_B:lambda_repressor-like_DNA-binding_domains; title=MDT PROTEIN organism=ESCHERICHIA COLI DNA sequence DA(T699) DC(T700) DT(T701) DA(T702) DT(T703) DC(T704) DC(T705) DC(T706) DC(T707) DT(T708) DT(T709) DA(T710) DA(T711) DG(T712) DG(T713) DG(T714) DG(T715) DA(T716) DT(T717) DA(T718) DG(T719) chainB ( 26) SER29 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 0 12 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak >3do7_A:p53-like_transcription_factors;E_set_domains; title=X-RAY STRUCTURE OF A NF-KB P52/RELB/DNA COMPLEX organism=MUS MUSCULUS DNA sequence DG(C3):DC(D23) DG(C4):DC(D22) DG(C5):DC(D21) DA(C6):DT(D20) DA(C7):DT(D19) DT(C8):DA(D18) DT(C9):DA(D17) DC(C10):DG(D16) DC(C11):DG(D15) chainA ( 30) ARG117 0 0 0 0 0 0 2 11 7 ( 32) ARG119 0 0 0 0 0 0 0 1 8 ( 33) TYR120 0 0 0 0 0 5 4 0 0 ( 35) CYS122 0 0 0 0 0 0 4 0 0 ( 36) GLU123 0 0 0 0 0 0 3 7 0 ( 38) ARG125 0 0 0 0 0 0 0 0 1 (187) LYS274 0 0 0 0 0 2 0 0 0 prot.sequence sctlgrlvspgpcprpylviteqpkqrgmRfRYeCEgRsagsilgessteasktqpaielrdcgglrevevtaclvwkdwphrvhphslvgkdctdgvcrvrlrphvsprhsfnnlgiqcvrkkeieaaierkiqlgidpynagslknhqevdmnvvricfqasyrdqqghlhrmdpilsepvydkKstntselricrinkesgpctggeelyllcdkvqkedisvvfstaswegradfsqadvhrqiaivfktppyedleisepvtvnvflqrltdgvcseplpftylprdhdsy >3dpg_A:Restriction_endonuclease-like; title=SGRAI WITH NONCOGNATE DNA BOUND organism=Streptomyces griseus DNA sequence DA(D2):DT(C17) DG(D3):DC(C16) DT(D4):DA(C15) DC(D5):DG(C14) DG(D6):DG(C13) DA(D7):DT(C12) DC(D8):DG(C11) DC(D9):DG(C10) DG(D10):DC(C9) DG(D11):DC(C8) DT(D12):DA(C7) DG(D13):DG(C6) DG(D14):DC(C5) DA(D15):DT(C4) chainA ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 14 13 1 0 ( 35) GLN36 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 9 12 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 3 4 11 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 4 12 0 0 (243) SER244 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 7 17 20 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 1 12 5 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 19 8 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng >3dpg_AB:Restriction_endonuclease-like; title=SGRAI WITH NONCOGNATE DNA BOUND organism=Streptomyces griseus DNA sequence DA(D2):DT(C17) DG(D3):DC(C16) DT(D4):DA(C15) DC(D5):DG(C14) DG(D6):DG(C13) DA(D7):DT(C12) DC(D8):DG(C11) DC(D9):DG(C10) DG(D10):DC(C9) DG(D11):DC(C8) DT(D12):DA(C7) DG(D13):DG(C6) DG(D14):DC(C5) DA(D15):DT(C4) chainA ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 14 13 1 0 ( 35) GLN36 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 9 12 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 3 4 11 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 4 12 0 0 (243) SER244 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 7 17 20 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 1 12 5 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 19 8 0 0 0 0 0 chainB ( 30) ARG31 0 0 0 1 13 10 0 0 0 0 0 0 0 0 ( 35) GLN36 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 13 9 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 8 7 5 0 0 0 0 0 0 0 (151) ARG152 0 3 6 7 1 0 0 0 0 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 18 17 5 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 5 12 2 0 0 0 (248) ARG249 0 0 0 0 0 0 0 10 18 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng/pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng >3dsc_A:Metallo-dependent_phosphatases; title=CRYSTAL STRUCTURE OF P. FURIOSUS MRE11 DNA SYNAPTIC COMPLEX organism=Pyrococcus furiosus DNA sequence DC(B1):DG(B18) DA(B2):DT(B17) DC(B3):DG(B16) DA(B4):DT(B15) DA(B5):DT(B14) DG(B6):DC(B13) DC(B7):DG(B12) chainA ( 17) HIS17 10 3 8 0 0 0 0 prot.sequence mkfahladihlgyeqfHkpqreeefaeafknaleiavqenvdfiliagdlfhssrpspgtlkkaiallqipkehsipvfaiegnhdrtqrgpsvlnlledfglvyvigmrkekveneyltserlgngeylvkgvykdleihgmkymssawfeankeilkrlfrptdnailmlhqgvrevseargedyfeiglgdlpegylyyalghihkryetsysgspvvypgslerwdfgdyevryewdgikfkerygvnkgfyivedfkprfveikvrpfidvkikgseeeirkaikrliplipknayvrlnigwrkpfdlteikellnveylkidtwri >3dsd_AB:Metallo-dependent_phosphatases; title=CRYSTAL STRUCTURE OF P. FURIOSUS MRE11-H85S BOUND TO A BRANCHED DNA AND MANGANESE organism=Pyrococcus furiosus DNA sequence DC(C5):DG(C22) DA(C6):DT(C21) DC(C7):DG(C20) DA(C8):DT(C19) DA(C9):DT(C18) DG(C10):DC(C17) DC(C11):DG(C16) DT(C12):DT(C15) chainA ( 89) GLN89 0 0 0 0 0 8 5 0 ( 90) ARG90 0 0 0 0 0 6 3 0 chainB ( 17) HIS17 0 0 8 9 3 0 0 0 prot.sequence mkfahladihlgyeqfhkpqreeefaeafknaleiavqenvdfiliagdlfhssrpspgtlkkaiallqipkehsipvfaiegnsdrtQRgpsvlnlledfglvyvigmrkekveneyltserlgngeylvkgvykdleihgmkymssawfeankeilkrlfrptdnailmlhqgvrevseargedyfeiglgdlpegylyyalghihkryetsysgspvvypgslerwdfgdyevryewdgikfkerygvnkgfyivedfkprfveikvrpfidvkikgseeeirkaikrliplipknayvrlnigwrkpfdlteikellnveylkidtwri/mkfahladihlgyeqfHkpqreeefaeafknaleiavqenvdfiliagdlfhssrpspgtlkkaiallqipkehsipvfaiegnsdrtqrgpsvlnlledfglvyvigmrkekveneyltserlgngeylvkgvykdleihgmkymssawfeankeilkrlfrptdnailmlhqgvrevseargedyfeiglgdlpegylyyalghihkryetsysgspvvypgslerwdfgdyevryewdgikfkerygvnkgfyivedfkprfveikvrpfidvkikgseeeirkaikrliplipknayvrlnigwrkpfdlteikellnveylkidtwri >3dsd_B:Metallo-dependent_phosphatases; title=CRYSTAL STRUCTURE OF P. FURIOSUS MRE11-H85S BOUND TO A BRANCHED DNA AND MANGANESE organism=Pyrococcus furiosus DNA sequence DC(C5):DG(C22) DA(C6):DT(C21) DC(C7):DG(C20) DA(C8):DT(C19) DA(C9):DT(C18) DG(C10):DC(C17) DC(C11):DG(C16) DT(C12):DT(C15) chainB ( 17) HIS17 0 0 8 9 3 0 0 0 prot.sequence mkfahladihlgyeqfHkpqreeefaeafknaleiavqenvdfiliagdlfhssrpspgtlkkaiallqipkehsipvfaiegnsdrtqrgpsvlnlledfglvyvigmrkekveneyltserlgngeylvkgvykdleihgmkymssawfeankeilkrlfrptdnailmlhqgvrevseargedyfeiglgdlpegylyyalghihkryetsysgspvvypgslerwdfgdyevryewdgikfkerygvnkgfyivedfkprfveikvrpfidvkikgseeeirkaikrliplipknayvrlnigwrkpfdlteikellnveylkidtwri >3dvo_A:Restriction_endonuclease-like; title=SGRAI WITH COGNATE DNA AND CALCIUM BOUND organism=Streptomyces griseus DNA sequence DG(E1):DC(F18) DA(E2):DT(F17) DG(E3):DC(F16) DT(E4):DA(F15) DC(E5):DG(F14) DC(E6):DG(F13) DA(E7):DT(F12) DC(E8):DG(F11) DC(E9):DG(F10) DG(E10):DC(F9) DG(E11):DC(F8) DT(E12):DA(F7) DG(E13):DC(F6) DG(E14):DC(F5) DA(E15):DT(F4) DC(E16):DG(F3) DT(E17):DA(F2) DC(E18):DG(F1) chainA ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 0 12 11 2 0 0 0 0 ( 35) GLN36 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 1 11 11 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 0 4 4 9 0 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 5 17 14 0 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 3 13 5 0 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 15 8 0 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakaKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaevhrairelyvpptaadlarrffaflnermelvng >3dvo_AB:Restriction_endonuclease-like; title=SGRAI WITH COGNATE DNA AND CALCIUM BOUND organism=Streptomyces griseus DNA sequence DG(E1):DC(F18) DA(E2):DT(F17) DG(E3):DC(F16) DT(E4):DA(F15) DC(E5):DG(F14) DC(E6):DG(F13) DA(E7):DT(F12) DC(E8):DG(F11) DC(E9):DG(F10) DG(E10):DC(F9) DG(E11):DC(F8) DT(E12):DA(F7) DG(E13):DC(F6) DG(E14):DC(F5) DA(E15):DT(F4) DC(E16):DG(F3) DT(E17):DA(F2) DC(E18):DG(F1) chainA ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 0 12 11 2 0 0 0 0 ( 35) GLN36 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 1 11 11 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 0 4 4 9 0 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 5 17 14 0 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 3 13 5 0 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 15 8 0 0 0 0 0 0 0 0 chainB ( 30) ARG31 0 0 0 0 2 11 13 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN36 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 10 11 1 0 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 11 5 4 0 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 0 12 7 0 0 0 0 0 0 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 0 17 17 8 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 0 5 8 3 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 8 16 0 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakaKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaevhrairelyvpptaadlarrffaflnermelvng/pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegavhrairelyvpptaadlarrffaflnermelvng >3dvo_CD:Restriction_endonuclease-like; title=SGRAI WITH COGNATE DNA AND CALCIUM BOUND organism=Streptomyces griseus DNA sequence DG(H1):DC(G18) DA(H2):DT(G17) DG(H3):DC(G16) DT(H4):DA(G15) DC(H5):DG(G14) DC(H6):DG(G13) DA(H7):DT(G12) DC(H8):DG(G11) DC(H9):DG(G10) DG(H10):DC(G9) DG(H11):DC(G8) DT(H12):DA(G7) DG(H13):DC(G6) DG(H14):DC(G5) DA(H15):DT(G4) DC(H16):DG(G3) DT(H17):DA(G2) DC(H18):DG(G1) chainC ( 30) ARG31 0 0 0 0 2 10 12 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN36 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 13 10 0 0 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 11 4 6 0 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 0 18 17 8 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 0 5 11 1 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 8 17 0 0 0 0 0 0 0 0 chainD ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 0 15 12 2 0 0 0 0 ( 35) GLN36 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 1 11 11 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 0 5 4 10 0 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 8 18 20 0 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 3 13 5 0 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 19 10 0 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaavhrairelyvpptaadlarrffaflnermelvng/pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegavhrairelyvpptaadlarrffaflnermelvng >3dw9_AB:Restriction_endonuclease-like; title=SGRAI WITH COGNATE DNA AND MANGANESE BOUND organism=Streptomyces griseus DNA sequence DG(E1):DC(F18) DA(E2):DT(F17) DG(E3):DC(F16) DT(E4):DA(F15) DC(E5):DG(F14) DC(E6):DG(F13) DA(E7):DT(F12) DC(E8):DG(F11) DC(E9):DG(F10) DG(E10):DC(F9) DG(E11):DC(F8) DT(E12):DA(F7) DG(E13):DC(F6) DG(E14):DC(F5) DA(E15):DT(F4) DC(E16):DG(F3) DT(E17):DA(F2) DC(E18):DG(F1) chainA ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 0 15 14 2 0 0 0 0 ( 35) GLN36 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 1 11 13 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 0 5 6 12 0 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 9 18 20 0 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 3 12 7 0 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 19 9 0 0 0 0 0 0 0 0 chainB ( 30) ARG31 0 0 0 0 2 14 16 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN36 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 13 9 0 0 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 11 6 6 0 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 0 11 7 1 0 0 0 0 0 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 0 17 19 10 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 0 5 12 3 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 9 19 0 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegvhrairelyvpptaadlarrffaflnermelvng/pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaevhrairelyvpptaadlarrffaflnermelvng >3dw9_B:Restriction_endonuclease-like; title=SGRAI WITH COGNATE DNA AND MANGANESE BOUND organism=Streptomyces griseus DNA sequence DG(F1):DC(E18) DA(F2):DT(E17) DG(F3):DC(E16) DT(F4):DA(E15) DC(F5):DG(E14) DC(F6):DG(E13) DA(F7):DT(E12) DC(F8):DG(E11) DC(F9):DG(E10) DG(F10):DC(E9) DG(F11):DC(E8) DT(F12):DA(E7) DG(F13):DC(E6) DG(F14):DC(E5) DA(F15):DT(E4) DC(F16):DG(E3) DT(F17):DA(E2) DC(F18):DG(E1) chainB ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 0 16 14 2 0 0 0 0 ( 35) GLN36 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 0 9 13 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 0 6 6 11 0 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 1 7 11 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 10 19 17 0 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 3 12 5 0 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 19 9 0 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaevhrairelyvpptaadlarrffaflnermelvng >3dzu_AD: title=INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DNA BOUND WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE organism=HOMO SAPIENS DNA sequence DC(C3001):DG(F4020) DA(C3002):DT(F4019) DA(C3003):DT(F4018) DA(C3004):DT(F4017) DC(C3005):DG(F4016) DT(C3006):DA(F4015) DA(C3007):DT(F4014) DG(C3008):DC(F4013) DG(C3009):DC(F4012) DT(C3010):DA(F4011) DC(C3011):DG(F4010) DA(C3012):DT(F4009) DA(C3013):DT(F4008) DA(C3014):DT(F4007) DG(C3015):DC(F4006) DG(C3016):DC(F4005) DT(C3017):DA(F4004) DC(C3018):DG(F4003) DA(C3019):DT(F4002) DG(C3020):DC(F4001) chainA ( 22) GLU153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 ( 25) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 ( 29) LYS160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 30) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 chainD ( 22) GLU129 0 0 0 0 0 0 0 0 11 9 0 0 0 0 0 0 0 0 0 0 ( 25) LYS132 0 0 0 0 0 0 5 6 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG136 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 ( 30) ARG137 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 ( 77) ARG184 0 4 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeerqranedmpverileaeladpvtnicqaadkqlftlvewakriphfselplddqvillragwnelliasfshrsiavkdgillatglhvhrnsahsagvgaifdrvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmeml/aiecrvcgdkasgfhygvhacEgcKgffRRtirlkliydrcdlncrihkksrnkcqycrfqkclavgmshnairfgRmpqaekekllaeissdidqlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkikfevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikktetdmslhpllqeiykdly >3dzu_D:Nuclear_receptor_ligand-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DNA BOUND WITH BVT.13, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE organism=HOMO SAPIENS DNA sequence DC(F4001):DG(C3020) DT(F4002):DA(C3019) DG(F4003):DC(C3018) DA(F4004):DT(C3017) DC(F4005):DG(C3016) DC(F4006):DG(C3015) DT(F4007):DA(C3014) DT(F4008):DA(C3013) DT(F4009):DA(C3012) DG(F4010):DC(C3011) DA(F4011):DT(C3010) DC(F4012):DG(C3009) DC(F4013):DG(C3008) DT(F4014):DA(C3007) DA(F4015):DT(C3006) DG(F4016):DC(C3005) DT(F4017):DA(C3004) DT(F4018):DA(C3003) DT(F4019):DA(C3002) DG(F4020):DC(C3001) chainD ( 22) GLU129 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 ( 25) LYS132 0 0 0 0 0 0 0 0 0 0 0 2 6 5 0 0 0 0 0 0 ( 29) ARG136 0 0 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 ( 30) ARG137 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 ( 77) ARG184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 4 0 prot.sequence aiecrvcgdkasgfhygvhacEgcKgffRRtirlkliydrcdlncrihkksrnkcqycrfqkclavgmshnairfgRmpqaekekllaeissdidqlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkikfevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikktetdmslhpllqeiykdly >3dzy_AD: title=INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DNA BOUND WITH ROSIGLITAZONE, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE organism=HOMO SAPIENS DNA sequence DC(C3001):DG(F4020) DA(C3002):DT(F4019) DA(C3003):DT(F4018) DA(C3004):DT(F4017) DC(C3005):DG(F4016) DT(C3006):DA(F4015) DA(C3007):DT(F4014) DG(C3008):DC(F4013) DG(C3009):DC(F4012) DT(C3010):DA(F4011) DC(C3011):DG(F4010) DA(C3012):DT(F4009) DA(C3013):DT(F4008) DA(C3014):DT(F4007) DG(C3015):DC(F4006) DG(C3016):DC(F4005) DT(C3017):DA(F4004) DC(C3018):DG(F4003) DA(C3019):DT(F4002) DG(C3020):DC(F4001) chainA ( 22) GLU153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 ( 25) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 29) LYS160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 30) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 chainD ( 22) GLU129 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 ( 25) LYS132 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG136 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG137 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 ( 75) PHE182 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG184 0 13 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeerqrgkdrnenevestssanedmpverileaelapvtnicqaadkqlftlvewakriphfselplddqvillragwnelliasfshrsiavkdgillatglhvhrnsahsagvgaifdrvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmeml/aiecrvcgdkasgfhygvhacEgcKgffRRtirlkliydrcdlncrihkksrnkcqycrfqkclavgmshnairFgRmpqaekekllaeissdidqlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgeevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikktetdmslhpllqeiykdly >3dzy_D:Nuclear_receptor_ligand-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DNA BOUND WITH ROSIGLITAZONE, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE organism=HOMO SAPIENS DNA sequence DC(C3001):DG(F4020) DA(C3002):DT(F4019) DA(C3003):DT(F4018) DA(C3004):DT(F4017) DC(C3005):DG(F4016) DT(C3006):DA(F4015) DA(C3007):DT(F4014) DG(C3008):DC(F4013) DG(C3009):DC(F4012) DT(C3010):DA(F4011) DC(C3011):DG(F4010) DA(C3012):DT(F4009) DA(C3013):DT(F4008) DA(C3014):DT(F4007) DG(C3015):DC(F4006) DG(C3016):DC(F4005) DT(C3017):DA(F4004) DC(C3018):DG(F4003) DA(C3019):DT(F4002) DG(C3020):DC(F4001) chainD ( 22) GLU129 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 ( 25) LYS132 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG136 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG137 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 ( 75) PHE182 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG184 0 13 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aiecrvcgdkasgfhygvhacEgcKgffRRtirlkliydrcdlncrihkksrnkcqycrfqkclavgmshnairFgRmpqaekekllaeissdidqlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgeevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikktetdmslhpllqeiykdly >3e00_A:Nuclear_receptor_ligand-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DNA BOUND WITH GW9662, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE organism=HOMO SAPIENS DNA sequence DC(C3001):DG(F4020) DA(C3002):DT(F4019) DA(C3003):DT(F4018) DA(C3004):DT(F4017) DC(C3005):DG(F4016) DT(C3006):DA(F4015) DA(C3007):DT(F4014) DG(C3008):DC(F4013) DG(C3009):DC(F4012) DT(C3010):DA(F4011) DC(C3011):DG(F4010) DA(C3012):DT(F4009) DA(C3013):DT(F4008) DA(C3014):DT(F4007) DG(C3015):DC(F4006) DG(C3016):DC(F4005) DT(C3017):DA(F4004) DC(C3018):DG(F4003) DA(C3019):DT(F4002) DG(C3020):DC(F4001) chainA ( 22) GLU153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 ( 25) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 ( 29) LYS160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 30) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 prot.sequence khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeerqranedmpverileaelavevtnicqaadkqlftlvewakriphfselplddqvillragwnelliasfshrsiavkdgillatglhvhrnsahsagvgaifdrvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmeml >3e00_AD: title=INTACT PPAR GAMMA - RXR ALPHA NUCLEAR RECEPTOR COMPLEX ON DNA BOUND WITH GW9662, 9-CIS RETINOIC ACID AND NCOA2 PEPTIDE organism=HOMO SAPIENS DNA sequence DC(F4001):DG(C3020) DT(F4002):DA(C3019) DG(F4003):DC(C3018) DA(F4004):DT(C3017) DC(F4005):DG(C3016) DC(F4006):DG(C3015) DT(F4007):DA(C3014) DT(F4008):DA(C3013) DT(F4009):DA(C3012) DG(F4010):DC(C3011) DA(F4011):DT(C3010) DC(F4012):DG(C3009) DC(F4013):DG(C3008) DT(F4014):DA(C3007) DA(F4015):DT(C3006) DG(F4016):DC(C3005) DT(F4017):DA(C3004) DT(F4018):DA(C3003) DT(F4019):DA(C3002) DG(F4020):DC(C3001) chainA ( 22) GLU153 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS156 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS160 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG161 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 23) GLU129 0 0 0 0 0 0 0 0 0 0 7 12 1 0 0 0 0 0 0 0 ( 26) LYS132 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 ( 30) ARG136 0 0 0 0 0 0 0 0 0 0 6 11 1 0 0 0 0 0 0 0 ( 31) ARG137 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 ( 34) ARG140 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 76) PHE182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 78) ARG184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 8 0 prot.sequence khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeerqranedmpverileaelavevtnicqaadkqlftlvewakriphfselplddqvillragwnelliasfshrsiavkdgillatglhvhrnsahsagvgaifdrvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmeml/maiecrvcgdkasgfhygvhacEgcKgffRRtiRlkliydrcdlncrihkksrnkcqycrfqkclavgmshnairFgRmpqaekekllaeissdidqlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkikfqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikktetdmslhpllqeiykdly >3e0d_A:PHP_domain-like; title=INSIGHTS INTO THE REPLISOME FROM THE CRYSTRAL STRUCTURE OF THE TERNARY COMPLEX OF THE EUBACTERIAL DNA POLYMERASE III ALPHA-SUBUNIT organism=Thermus aquaticus DNA sequence DA(D3):DT(C25) DA(D4):DT(C24) DA(D5):DT(C23) DC(D6):DG(C22) DG(D7):DC(C21) DA(D8):DT(C20) DC(D9):DG(C19) DG(D10):DC(C18) DG(D11):DC(C17) DC(D12):DG(C16) DC(D13):DG(C15) DA(D14):DT(C14) DG(D15):DC(C13) DT(D16):DA(C12) DG(D17):DC(C11) DC(D18):DG(C10) DC(D19):DG(C9) DA(D20):DT(C8) chainA (505) LYS531 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (549) HIS575 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (550) ALA576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 1 (594) LEU620 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence lkfahlhqhtqfsllngaaklqdllkwvkettpedpalamtdhgnlfgavefykkatamgvkpiigyeayvaaesrfdrkrggyfhltllakdftgyqnlvrlasraylegfyekpridreilrehaqglialsgclgaeipqfilqdrldlaearlnedlsifgdrffieiqnhglpeqkkvnqvlkefarkyglgmvatnnghyvrkedarahevllaiqskttlddperwrfpcdefyvktpeemramlpeaewgdepfdntveiarmcdvdlpigdkmvyriprfplgrteaqylreltflgllrrypdriteafyrevlrllderalaealarveekaweelrkrewtaeailhralyelsviermgfpgyflivqdyinwarghgvsvgpgrgsaagslvayavgitnidplrfgllferflnpervsmpdidtdfsdrerdrviqyvrerygedkvaqigtfgslaskaalkdvarvygiphkkaeelaklipvqfgKpkplqeafeaepelraemekderirqvievamrleglnrhasvHAagvviaaepltdlvplmrdqegrpvtqydmgavealgllkmdfLglrtltfldearrivkeskgveldydrlplddpktfellsrgetkgvfqlesggmtatvrglkprrlediialvslyrpgpmehiptyirrhhgqepvsyaefphaekylrpildetygipvyqeqimqiasqvagyslgeadllrramgkkrveemqkhrerfvrgakergvpeeeanrlfdmleafanygfnkshaaaysllsyqtayvkahypvefmaallsverhdsdkvaeyirdaralgipvlppdvnrsgfdfkvvgeeilfglsavknvgemaaraileererggpfkslgdflkrlpeqvvnkraleslvkagaldafgdrarllaslepllrwaaetrergrsglvglfaeveepplveaspldeitmlryekealgiyvsghpvlrypglrevasctieelsefvrelpgkpkvllsgmveevrftlsdetgalevvkedipllvlaevervlaqavwtleevleapkalevevdhalldekgarlkslldehpgslpvylrvlgpfgealfalrevrvgeealglleaegyraylvpdrevf >3e2e_A:DNA/RNA_polymerases; title=CRYSTAL STRUCTURE OF AN INTERMEDIATE COMPLEX OF T7 RNAP AND 7NT OF RNA organism=Bacteriophage T7 DNA sequence DA(T1):DT(N133) DG(T2):DC(N132) DC(T3):DG(N131) DC(T4):DG(N130) DG(T5):DC(N129) DT(T6):DA(N128) DG(T7):DC(N127) DC(T8):DG(N126) DG(T9):DC(N125) DT(T13):DG(N124) DC(T14):DG(N123) DC(T15):DT(N122) DC(T16):DC(N121) DT(T19):DT(N120) DA(T20):DT(N119) DG(T21):DC(N113) DT(T22):DA(N112) DG(T23):DC(N111) DA(T24):DT(N110) DG(T25):DC(N109) DT(T26):DA(N108) DC(T27):DG(N107) DG(T28):DC(N106) DT(T29):DA(N105) DA(T30):DT(N104) DT(T31):DA(N103) DT(T32):DA(N102) DA(T33):DT(N101) chainA ( 74) ARG96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 12 ( 76) LYS98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 1 0 0 (113) GLN135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) SER139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) LYS206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ILE210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (204) VAL237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 (207) ASP240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 (340) TYR385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ARG386 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (593) PHE644 0 0 0 0 0 0 0 0 110 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (596) ARG647 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (597) GLN648 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (600) LEU651 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (620) ASN671 0 0 0 0 0 0 0 0 0 9 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (695) ARG746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 11 0 0 0 0 0 0 0 0 0 0 (697) ASN748 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 0 0 0 0 0 (705) ARG756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 13 9 0 0 0 0 0 0 0 (707) GLN758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 2 0 0 0 0 0 0 0 0 (709) THR760 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (710) ILE761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (711) ASN762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kndfsdielaaipfntladhygerlareqlalehesyemgearfrkmferlittllpkmiarindwfeevkakRgKrptafqflqeikpeavayitikttlacltsadnttvQavaSaigraiedearfgrirdleakhfkknvykkafmqvveadmlskgllggeawsswhKedsIhvgvrciemliestgmvslhRqnagvVgqDsetielapeyaeaiislmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiereelpmkpdmnpealtawkraaaavYRkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvtvtisekvklgtkalagqwlaygvtrsvtkrsvmtlaygskeFgfRQqvLedtiqpaidsgkglmftqpNqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtRlNlmflgqfRlQpTINtnkdseidahkqesgiapnfvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa >3e3j_C:DNA/RNA_polymerases; title=CRYSTAL STRUCTURE OF AN INTERMEDIATE COMPLEX OF T7 RNAP AND 8NT OF RNA organism=Bacteriophage T7 DNA sequence DT(T9):DC(N132) DA(T10):DG(N131) DC(T11):DG(N130) DT(T12):DC(N129) DC(T13):DA(N128) DC(T14):DA(N127) DC(T15):DA(N126) DG(T20):DC(N113) DT(T21):DA(N112) DG(T22):DC(N111) DA(T23):DT(N110) DG(T24):DC(N109) DT(T25):DA(N108) DC(T26):DG(N107) DG(T27):DC(N106) DT(T28):DA(N105) DA(T29):DT(N104) DT(T30):DA(N103) DT(T31):DA(N102) DA(T32):DT(N101) chainC ( 72) ARG96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 13 ( 74) LYS98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 1 0 0 (194) ARG231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (200) VAL237 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 (203) ASP240 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 (379) ARG423 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) TYR427 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (594) PHE644 0 0 0 0 0 0 122 0 0 0 0 0 0 0 0 0 0 0 0 0 (597) ARG647 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (696) ARG746 0 0 0 0 0 0 0 0 13 12 1 0 0 0 0 0 0 0 0 0 (698) ASN748 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 (706) ARG756 0 0 0 0 0 0 0 0 0 0 5 10 10 1 0 0 0 0 0 0 (708) GLN758 0 0 0 0 0 0 0 0 0 7 8 1 0 0 0 0 0 0 0 0 (710) THR760 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (734) HIS784 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kndfsdielaaipfntladhygerlareqlalehesyemgearfrkmflittllpkmiarindwfeevkakRgKrptafqflqeikpeavayitikttlacltsadnttvqavasaigraiedearfgrirdleakhfkknvkafmqvveadmlskgllggeawsswhkedsihvgvrciemliestgmvslhRqnagvVgqDsetielapeyaeaiagislmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiereelpmkpedidmnpealtawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwRgrvYavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvtvtisekvklgtkalagqwlaygvtrsvtkrsvmtlaygskeFgfRqqvledtiqpaidsgkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtRlNlmflgqfRlQpTintnkdseidahkqesgiapnfvHsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa >3e3y_AB:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO GTTAAC AND COCRYSTALLIZED WITH 5 MM CA2+ organism=Haemophilus influenzae DNA sequence DG(E1):DC(F14) DC(E2):DG(F13) DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DT(E6):DA(F9) DT(E7):DA(F8) DA(E8):DT(F7) DA(E9):DT(F6) DC(E10):DG(F5) DC(E11):DG(F4) DG(E12):DC(F3) DG(E13):DC(F2) DC(E14):DG(F1) chainA ( 94) ASN110 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (120) SER136 0 0 5 6 0 0 0 0 0 0 0 0 0 0 (122) PHE138 0 0 0 51 54 0 0 0 0 0 0 0 0 0 (124) PRO140 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (125) ASN141 0 0 0 0 1 15 5 1 0 0 0 0 0 0 (183) TYR199 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (185) ASN201 0 0 0 2 8 0 0 0 0 0 0 0 0 0 (187) ALA203 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (188) ALA204 0 0 0 0 4 3 0 0 0 0 0 0 0 0 (189) ALA205 0 0 0 0 0 0 0 2 3 0 0 0 0 0 (191) GLN207 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (193) GLN209 0 0 0 0 6 1 0 0 0 0 0 0 0 0 chainB ( 93) GLN109 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 94) ASN110 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (120) SER136 0 0 0 0 0 0 0 0 0 0 6 6 0 0 (122) PHE138 0 0 0 0 0 0 0 0 0 54 52 0 0 0 (124) PRO140 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (125) ASN141 0 0 0 0 0 0 1 5 14 1 0 0 0 0 (183) TYR199 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (185) ASN201 0 0 0 0 0 0 0 0 0 8 2 0 0 0 (187) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (188) ALA204 0 0 0 0 0 0 0 0 4 4 0 0 0 0 (189) ALA205 0 0 0 0 0 3 2 0 0 0 0 0 0 0 (191) GLN207 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (193) GLN209 0 0 0 0 0 0 0 0 1 7 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqkvkfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >3e3y_B:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO GTTAAC AND COCRYSTALLIZED WITH 5 MM CA2+ organism=Haemophilus influenzae DNA sequence DG(E1):DC(F14) DC(E2):DG(F13) DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DT(E6):DA(F9) DT(E7):DA(F8) DA(E8):DT(F7) DA(E9):DT(F6) DC(E10):DG(F5) DC(E11):DG(F4) DG(E12):DC(F3) DG(E13):DC(F2) DC(E14):DG(F1) chainB ( 93) GLN109 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 94) ASN110 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (120) SER136 0 0 0 0 0 0 0 0 0 0 6 6 0 0 (122) PHE138 0 0 0 0 0 0 0 0 0 54 52 0 0 0 (124) PRO140 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (125) ASN141 0 0 0 0 0 0 1 5 14 1 0 0 0 0 (183) TYR199 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (185) ASN201 0 0 0 0 0 0 0 0 0 8 2 0 0 0 (187) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (188) ALA204 0 0 0 0 0 0 0 0 4 4 0 0 0 0 (189) ALA205 0 0 0 0 0 3 2 0 0 0 0 0 0 0 (191) GLN207 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (193) GLN209 0 0 0 0 0 0 0 0 1 7 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >3e40_AB:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO GTTAAC AND COCRYSTALLIZED WITH 5 MM CA2+ organism=Haemophilus influenzae DNA sequence DG(E1):DC(F14) DC(E2):DG(F13) DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DT(E6):DA(F9) DT(E7):DA(F8) DA(E8):DT(F7) DA(E9):DT(F6) DC(E10):DG(F5) DC(E11):DG(F4) DG(E12):DC(F3) DG(E13):DC(F2) DC(E14):DG(F1) chainA ( 98) GLN109 0 0 0 0 0 0 0 9 5 2 0 0 0 0 ( 99) ASN110 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (125) SER136 0 0 5 5 0 0 0 0 0 0 0 0 0 0 (127) PHE138 0 0 0 53 56 0 0 0 0 0 0 0 0 0 (129) PRO140 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (130) ASN141 0 0 0 0 1 15 5 2 0 0 0 0 0 0 (188) TYR199 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (190) ASN201 0 0 0 2 9 0 0 0 0 0 0 0 0 0 (192) ALA203 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (193) ALA204 0 0 0 0 4 3 0 0 0 0 0 0 0 0 (194) ALA205 0 0 0 0 0 0 0 2 3 0 0 0 0 0 (196) GLN207 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (198) GLN209 0 0 0 0 6 1 0 0 0 0 0 0 0 0 chainB ( 93) ASN110 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (119) SER136 0 0 0 0 0 0 0 0 0 0 4 4 0 0 (121) PHE138 0 0 0 0 0 0 0 0 0 54 53 0 0 0 (123) PRO140 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (124) ASN141 0 0 0 0 0 0 1 3 15 1 0 0 0 0 (182) TYR199 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (184) ASN201 0 0 0 0 0 0 0 0 0 8 2 0 0 0 (186) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (187) ALA204 0 0 0 0 0 0 0 0 4 4 0 0 0 0 (188) ALA205 0 0 0 0 0 3 2 0 0 0 0 0 0 0 (190) GLN207 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (192) GLN209 0 0 0 0 0 0 0 0 1 6 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkragepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqkvkreklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil >3e40_B:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO GTTAAC AND COCRYSTALLIZED WITH 5 MM CA2+ organism=Haemophilus influenzae DNA sequence DG(F1):DC(E14) DC(F2):DG(E13) DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DT(F7):DA(E8) DA(F8):DT(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(F13):DC(E2) DC(F14):DG(E1) chainB ( 93) ASN110 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (119) SER136 0 0 4 4 0 0 0 0 0 0 0 0 0 0 (121) PHE138 0 0 0 53 54 0 0 0 0 0 0 0 0 0 (123) PRO140 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (124) ASN141 0 0 0 0 1 15 3 1 0 0 0 0 0 0 (182) TYR199 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (184) ASN201 0 0 0 2 8 0 0 0 0 0 0 0 0 0 (186) ALA203 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (187) ALA204 0 0 0 0 4 4 0 0 0 0 0 0 0 0 (188) ALA205 0 0 0 0 0 0 0 2 3 0 0 0 0 0 (190) GLN207 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (192) GLN209 0 0 0 0 6 1 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkreklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil >3e41_A:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO GTCGAC AND 5 MM CA2+ organism=Haemophilus influenzae DNA sequence DG(E1):DC(F14) DC(E2):DG(F13) DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DT(E6):DA(F9) DC(E7):DG(F8) DG(E8):DC(F7) DA(E9):DT(F6) DC(E10):DG(F5) DC(E11):DG(F4) DG(E12):DC(F3) DG(E13):DC(F2) DC(E14):DG(F1) chainA ( 99) GLN109 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (100) ASN110 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (126) SER136 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (128) PHE138 0 0 0 56 51 0 0 0 0 0 0 0 0 0 (130) PRO140 0 0 0 0 1 3 0 0 0 0 0 0 0 0 (131) ASN141 0 0 0 0 1 17 7 3 0 0 0 0 0 0 (188) TYR199 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (190) ASN201 0 0 0 2 8 0 0 0 0 0 0 0 0 0 (192) ALA203 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (193) ALA204 0 0 0 0 4 4 0 0 0 0 0 0 0 0 (194) ALA205 0 0 0 0 0 0 0 3 5 0 0 0 0 0 (196) GLN207 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (198) GLN209 0 0 0 0 7 1 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrpagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngdlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >3e41_AB:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO GTCGAC AND 5 MM CA2+ organism=Haemophilus influenzae DNA sequence DG(E1):DC(F14) DC(E2):DG(F13) DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DT(E6):DA(F9) DC(E7):DG(F8) DG(E8):DC(F7) DA(E9):DT(F6) DC(E10):DG(F5) DC(E11):DG(F4) DG(E12):DC(F3) DG(E13):DC(F2) DC(E14):DG(F1) chainA ( 99) GLN109 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (100) ASN110 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (126) SER136 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (128) PHE138 0 0 0 56 51 0 0 0 0 0 0 0 0 0 (130) PRO140 0 0 0 0 1 3 0 0 0 0 0 0 0 0 (131) ASN141 0 0 0 0 1 17 7 3 0 0 0 0 0 0 (188) TYR199 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (190) ASN201 0 0 0 2 8 0 0 0 0 0 0 0 0 0 (192) ALA203 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (193) ALA204 0 0 0 0 4 4 0 0 0 0 0 0 0 0 (194) ALA205 0 0 0 0 0 0 0 3 5 0 0 0 0 0 (196) GLN207 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (198) GLN209 0 0 0 0 7 1 0 0 0 0 0 0 0 0 chainB ( 95) GLN109 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 96) ASN110 0 0 0 0 1 3 0 0 0 0 0 0 0 0 (122) SER136 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (124) PHE138 0 0 0 0 0 0 0 0 0 49 55 0 0 0 (126) PRO140 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (127) ASN141 0 0 0 0 0 0 2 6 14 1 0 0 0 0 (185) TYR199 0 0 0 0 0 0 0 0 0 0 8 0 0 0 (187) ASN201 0 0 0 0 0 0 0 0 0 10 2 0 0 0 (189) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (190) ALA204 0 0 0 0 0 0 0 0 4 3 0 0 0 0 (191) ALA205 0 0 0 0 0 4 3 0 0 0 0 0 0 0 (193) GLN207 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (195) GLN209 0 0 0 0 0 0 0 0 1 7 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrpagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngdlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi/sfikpiyqdinsiligqkvgepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >3e42_A:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO GTCGAC AND CA2+ (COCRYSTALLIZED) organism=Haemophilus influenzae DNA sequence DG(F1):DC(E14) DC(F2):DG(E13) DC(F3):DG(E12) DG(F4):DC(E11) DG(F5):DC(E10) DT(F6):DA(E9) DC(F7):DG(E8) DG(F8):DC(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(F13):DC(E2) DC(F14):DG(E1) chainA (100) GLN109 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (101) ASN110 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (127) SER136 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (129) PHE138 0 0 0 0 0 0 0 0 0 52 59 0 0 0 (131) PRO140 0 0 0 0 0 0 0 0 3 1 0 0 0 0 (132) ASN141 0 0 0 0 0 0 3 7 14 1 0 0 0 0 (190) TYR199 0 0 0 0 0 0 0 0 0 0 7 0 0 0 (192) ASN201 0 0 0 0 0 0 0 0 0 9 2 0 0 0 (194) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (195) ALA204 0 0 0 0 0 0 0 0 4 4 0 0 0 0 (196) ALA205 0 0 0 0 0 4 3 0 0 0 0 0 0 0 (198) GLN207 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (200) GLN209 0 0 0 0 0 0 0 0 1 7 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrpaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >3e42_AB:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO GTCGAC AND CA2+ (COCRYSTALLIZED) organism=Haemophilus influenzae DNA sequence DG(E1):DC(F14) DC(E2):DG(F13) DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DT(E6):DA(F9) DC(E7):DG(F8) DG(E8):DC(F7) DA(E9):DT(F6) DC(E10):DG(F5) DC(E11):DG(F4) DG(E12):DC(F3) DG(E13):DC(F2) DC(E14):DG(F1) chainA (100) GLN109 0 0 0 0 0 0 0 10 0 0 0 0 0 0 (101) ASN110 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (127) SER136 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (129) PHE138 0 0 0 59 52 0 0 0 0 0 0 0 0 0 (131) PRO140 0 0 0 0 1 3 0 0 0 0 0 0 0 0 (132) ASN141 0 0 0 0 1 14 7 3 0 0 0 0 0 0 (190) TYR199 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (192) ASN201 0 0 0 2 9 0 0 0 0 0 0 0 0 0 (194) ALA203 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (195) ALA204 0 0 0 0 4 4 0 0 0 0 0 0 0 0 (196) ALA205 0 0 0 0 0 0 0 3 4 0 0 0 0 0 (198) GLN207 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (200) GLN209 0 0 0 0 7 1 0 0 0 0 0 0 0 0 chainB ( 93) ASN110 0 0 0 0 1 3 0 0 0 0 0 0 0 0 (119) SER136 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (121) PHE138 0 0 0 0 0 0 0 0 0 51 56 0 0 0 (123) PRO140 0 0 0 0 0 0 0 0 3 1 0 0 0 0 (124) ASN141 0 0 0 0 0 0 2 7 15 1 0 0 0 0 (182) TYR199 0 0 0 0 0 0 0 0 0 0 7 0 0 0 (184) ASN201 0 0 0 0 0 0 0 0 0 11 3 0 0 0 (186) ALA203 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (187) ALA204 0 0 0 0 0 0 0 0 4 4 0 0 0 0 (188) ALA205 0 0 0 0 0 3 3 0 0 0 0 0 0 0 (190) GLN207 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (192) GLN209 0 0 0 0 0 0 0 0 1 7 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrpaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi/sfikpiyqdinsiligqkepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfsptllfllsrgkaatenwsienlfeekqNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >3e43_AB:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO GTTAAC AND COCRYSTALLIZED WITH 2.5 MM MGCL2 organism=Haemophilus influenzae DNA sequence DG(E1):DC(F14) DC(E2):DG(F13) DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DT(E6):DA(F9) DT(E7):DA(F8) DA(E8):DT(F7) DA(E9):DT(F6) DC(E10):DG(F5) DC(E11):DG(F4) DG(E12):DC(F3) DG(E13):DC(F2) DC(E14):DG(F1) chainA (100) GLN109 0 0 0 0 0 0 0 7 6 3 0 0 0 0 (101) ASN110 0 0 0 0 0 0 0 1 5 8 0 0 0 0 (127) SER136 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (129) PHE138 0 0 0 51 46 0 0 0 0 0 0 0 0 0 (131) PRO140 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (132) ASN141 0 0 0 0 1 16 5 1 0 0 0 0 0 0 (190) TYR199 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (192) ASN201 0 0 0 2 9 0 0 0 0 0 0 0 0 0 (194) ALA203 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (195) ALA204 0 0 0 0 4 3 0 0 0 0 0 0 0 0 (196) ALA205 0 0 0 0 0 0 0 1 3 0 0 0 0 0 (198) GLN207 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (200) GLN209 0 0 0 0 5 1 0 0 0 0 0 0 0 0 chainB ( 92) GLN109 0 0 0 0 1 3 5 0 0 0 0 0 0 0 ( 93) ASN110 0 0 0 0 4 1 0 0 0 0 0 0 0 0 (119) SER136 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (121) PHE138 0 0 0 0 0 0 0 0 0 52 49 0 0 0 (123) PRO140 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (124) ASN141 0 0 0 0 0 0 1 7 16 1 0 0 0 0 (182) TYR199 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (184) ASN201 0 0 0 0 0 0 0 0 0 8 2 0 0 0 (186) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (187) ALA204 0 0 0 0 0 0 0 0 2 3 0 0 0 0 (188) ALA205 0 0 0 0 0 4 1 0 0 0 0 0 0 0 (190) GLN207 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (192) GLN209 0 0 0 0 0 0 0 0 1 6 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrpaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi/sfikpiyqdinsiligqkpfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >3e43_B:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO GTTAAC AND COCRYSTALLIZED WITH 2.5 MM MGCL2 organism=Haemophilus influenzae DNA sequence DG(E1):DC(F14) DC(E2):DG(F13) DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DT(E6):DA(F9) DT(E7):DA(F8) DA(E8):DT(F7) DA(E9):DT(F6) DC(E10):DG(F5) DC(E11):DG(F4) DG(E12):DC(F3) DG(E13):DC(F2) DC(E14):DG(F1) chainB ( 92) GLN109 0 0 0 0 1 3 5 0 0 0 0 0 0 0 ( 93) ASN110 0 0 0 0 4 1 0 0 0 0 0 0 0 0 (119) SER136 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (121) PHE138 0 0 0 0 0 0 0 0 0 52 49 0 0 0 (123) PRO140 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (124) ASN141 0 0 0 0 0 0 1 7 16 1 0 0 0 0 (182) TYR199 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (184) ASN201 0 0 0 0 0 0 0 0 0 8 2 0 0 0 (186) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (187) ALA204 0 0 0 0 0 0 0 0 2 3 0 0 0 0 (188) ALA205 0 0 0 0 0 4 1 0 0 0 0 0 0 0 (190) GLN207 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (192) GLN209 0 0 0 0 0 0 0 0 1 6 0 0 0 0 prot.sequence sfikpiyqdinsiligqkpfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >3e44_AB:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO CLEAVED DNA (GTT | AAC) AND MN2+ organism=Haemophilus influenzae DNA sequence DG(G1):DC(F14) DC(G2):DG(F13) DC(G3):DG(F12) DG(G4):DC(F11) DG(G5):DC(F10) DT(G6):DA(F9) DT(G7):DA(F8) DA(H8):DT(E7) DA(H9):DT(E6) DC(H10):DG(E5) DC(H11):DG(E4) DG(H12):DC(E3) DG(H13):DC(E2) DC(H14):DG(E1) chainA ( 99) GLN109 0 0 0 0 3 7 7 0 0 0 0 0 0 0 (100) ASN110 0 0 0 0 6 4 0 0 0 0 0 0 0 0 (126) SER136 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (128) PHE138 0 0 0 0 0 0 0 0 0 49 50 0 0 0 (130) PRO140 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (131) ASN141 0 0 0 0 0 0 1 8 13 1 0 0 0 0 (189) TYR199 0 0 0 0 0 0 0 0 0 0 7 0 0 0 (191) ASN201 0 0 0 0 0 0 0 0 0 8 2 0 0 0 (193) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (194) ALA204 0 0 0 0 0 0 0 0 3 3 0 0 0 0 (195) ALA205 0 0 0 0 0 2 2 0 0 0 0 0 0 0 (197) GLN207 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (199) GLN209 0 0 0 0 0 0 0 0 1 6 0 0 0 0 chainB ( 93) GLN109 0 0 0 0 0 0 0 5 2 2 0 0 0 0 ( 94) ASN110 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (120) SER136 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (122) PHE138 0 0 0 57 52 0 0 0 0 0 0 0 0 0 (124) PRO140 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (125) ASN141 0 0 0 0 0 14 9 2 0 0 0 0 0 0 (183) TYR199 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (185) ASN201 0 0 0 2 9 0 0 0 0 0 0 0 0 0 (187) ALA203 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (188) ALA204 0 0 0 0 4 3 0 0 0 0 0 0 0 0 (189) ALA205 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (191) GLN207 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (193) GLN209 0 0 0 0 6 1 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkraagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi/sfikpiyqdinsiligqkvpfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >3e44_B:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO CLEAVED DNA (GTT | AAC) AND MN2+ organism=Haemophilus influenzae DNA sequence DG(G1):DC(F14) DC(G2):DG(F13) DC(G3):DG(F12) DG(G4):DC(F11) DG(G5):DC(F10) DT(G6):DA(F9) DT(G7):DA(F8) DA(H8):DT(E7) DA(H9):DT(E6) DC(H10):DG(E5) DC(H11):DG(E4) DG(H12):DC(E3) DG(H13):DC(E2) DC(H14):DG(E1) chainB ( 93) GLN109 0 0 0 0 0 0 0 5 2 2 0 0 0 0 ( 94) ASN110 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (120) SER136 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (122) PHE138 0 0 0 57 52 0 0 0 0 0 0 0 0 0 (124) PRO140 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (125) ASN141 0 0 0 0 0 14 9 2 0 0 0 0 0 0 (183) TYR199 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (185) ASN201 0 0 0 2 9 0 0 0 0 0 0 0 0 0 (187) ALA203 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (188) ALA204 0 0 0 0 4 3 0 0 0 0 0 0 0 0 (189) ALA205 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (191) GLN207 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (193) GLN209 0 0 0 0 6 1 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvpfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >3e45_A:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO NONCOGNATE DNA (GTGCAC) AND CA2+ organism=Haemophilus influenzae DNA sequence DG(E1):DC(F14) DC(E2):DG(F13) DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DT(E6):DA(F9) DG(E7):DC(F8) DC(E8):DG(F7) DA(E9):DT(F6) DC(E10):DG(F5) DC(E11):DG(F4) DG(E12):DC(F3) DG(E13):DC(F2) DC(E14):DG(F1) chainA ( 97) GLN109 0 0 0 0 0 0 0 10 4 1 0 0 0 0 ( 98) ASN110 0 0 0 0 0 0 0 0 3 1 0 0 0 0 (124) SER136 0 0 1 2 0 0 0 0 0 0 0 0 0 0 (126) PHE138 0 0 0 55 52 0 0 0 0 0 0 0 0 0 (128) PRO140 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (129) ASN141 0 0 0 0 2 16 3 0 0 0 0 0 0 0 (187) TYR199 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (189) ASN201 0 0 0 2 8 0 0 0 0 0 0 0 0 0 (191) ALA203 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (192) ALA204 0 0 0 0 3 4 0 0 0 0 0 0 0 0 (193) ALA205 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (197) GLN209 0 0 0 0 6 1 0 0 0 0 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrgepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmqiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil >3e45_AB:Restriction_endonuclease-like; title=Q138F HINCII BOUND TO NONCOGNATE DNA (GTGCAC) AND CA2+ organism=Haemophilus influenzae DNA sequence DG(E1):DC(F14) DC(E2):DG(F13) DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DT(E6):DA(F9) DG(E7):DC(F8) DC(E8):DG(F7) DA(E9):DT(F6) DC(E10):DG(F5) DC(E11):DG(F4) DG(E12):DC(F3) DG(E13):DC(F2) DC(E14):DG(F1) chainA ( 97) GLN109 0 0 0 0 0 0 0 10 4 1 0 0 0 0 ( 98) ASN110 0 0 0 0 0 0 0 0 3 1 0 0 0 0 (124) SER136 0 0 1 2 0 0 0 0 0 0 0 0 0 0 (126) PHE138 0 0 0 55 52 0 0 0 0 0 0 0 0 0 (128) PRO140 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (129) ASN141 0 0 0 0 2 16 3 0 0 0 0 0 0 0 (187) TYR199 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (189) ASN201 0 0 0 2 8 0 0 0 0 0 0 0 0 0 (191) ALA203 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (192) ALA204 0 0 0 0 3 4 0 0 0 0 0 0 0 0 (193) ALA205 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (197) GLN209 0 0 0 0 6 1 0 0 0 0 0 0 0 0 chainB ( 23) HIS31 0 0 0 0 0 0 6 2 0 0 0 0 0 0 (101) GLN109 0 0 0 0 0 2 9 0 0 0 0 0 0 0 (102) ASN110 0 0 0 0 1 3 0 0 0 0 0 0 0 0 (128) SER136 0 0 0 0 0 0 0 0 0 0 4 2 0 0 (130) PHE138 0 0 0 0 0 0 0 0 0 52 57 0 0 0 (132) PRO140 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (133) ASN141 0 0 0 0 0 0 0 4 13 1 0 0 0 0 (191) TYR199 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (193) ASN201 0 0 0 0 0 0 0 0 0 9 2 0 0 0 (195) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (196) ALA204 0 0 0 0 0 0 0 0 4 4 0 0 0 0 (197) ALA205 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (201) GLN209 0 0 0 0 0 0 0 0 1 7 0 0 0 0 prot.sequence sfikpiyqdinsiligqkvkrgepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmqiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqkvkrgHaagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmqiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi >3e54_A:Homing_endonucleases; title=ARCHAEAL INTRON-ENCODED HOMING ENDONUCLEASE I-VDI141I COMPLEXED WITH DNA organism=Vulcanisaeta distributa DNA sequence DT(E601):DA(D511) DT(E602):DA(D510) DG(E603):DC(D509) DG(E604):DC(D508) DC(E605):DG(D507) DT(E606):DA(D506) DA(E607):DT(D505) DC(E608):DG(D504) DC(E609):DG(D503) DT(E610):DA(C502) DT(E611):DA(C501) DA(E612):DT(C500) DA(E613):DT(C499) DG(F614):DC(C498) DA(F615):DT(C497) DG(F616):DC(C496) DA(F617):DT(C495) DG(F618):DC(C494) DT(F619):DA(C493) DC(F620):DG(C492) DA(F621):DT(C491) DG(F622):DC(C490) chainA ( 18) SER21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 20) SER23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 22) SER25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 ( 24) LYS27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 16 6 0 0 0 ( 26) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 6 3 ( 28) ASP31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 29) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 ( 34) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 21 0 ( 36) ASP39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 42) THR45 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 60) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 62) MET65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 64) LYS67 0 0 0 0 0 0 0 0 0 0 0 0 5 7 1 0 0 0 0 0 0 0 ( 65) ALA68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 67) GLN70 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 ( 76) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (139) LYS142 0 0 0 0 0 0 0 0 0 0 0 7 10 6 0 0 0 0 0 0 0 0 (141) TYR144 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 4 0 0 0 0 0 0 prot.sequence eedfkegyilgfieaegSfSvSiKfQrDVfggvRlDpvfsiTqknrevleaikehlgigRiMeKAgQpntyvyvvDnfnelvklinflnkyadfmivkkrqflmfreianglvngehlhinglkrlvklayeltkeseKgYrkydlnhvlsiidkwdlg >3e54_AB:Homing_endonucleases; title=ARCHAEAL INTRON-ENCODED HOMING ENDONUCLEASE I-VDI141I COMPLEXED WITH DNA organism=Vulcanisaeta distributa DNA sequence DC(C490):DG(F622) DT(C491):DA(F621) DG(C492):DC(F620) DA(C493):DT(F619) DC(C494):DG(F618) DT(C495):DA(F617) DC(C496):DG(F616) DT(C497):DA(F615) DC(C498):DG(F614) DT(C499):DA(E613) DT(C500):DA(E612) DA(C501):DT(E611) DA(C502):DT(E610) DG(D503):DC(E609) DG(D504):DC(E608) DT(D505):DA(E607) DA(D506):DT(E606) DG(D507):DC(E605) DC(D508):DG(E604) DC(D509):DG(E603) DA(D510):DT(E602) DA(D511):DT(E601) chainA ( 18) SER21 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER23 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) SER25 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS27 0 0 0 6 16 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) GLN29 3 6 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASP31 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) VAL32 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG37 0 21 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASP39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR45 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG63 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) MET65 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LYS67 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ALA68 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) GLN70 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP79 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) LYS142 0 0 0 0 0 0 0 0 6 10 7 0 0 0 0 0 0 0 0 0 0 0 (141) TYR144 0 0 0 0 0 0 4 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 18) SER221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 20) SER223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 22) SER225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 ( 24) LYS227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 5 0 0 0 ( 26) GLN229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 8 4 ( 28) ASP231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 ( 29) VAL232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 ( 34) ARG237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 22 0 ( 36) ASP239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 42) THR245 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 60) ARG263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 62) MET265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 64) LYS267 0 0 0 0 0 0 0 0 0 0 0 0 5 7 2 0 0 0 0 0 0 0 ( 65) ALA268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 67) GLN270 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 ( 76) ASP279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (139) LYS342 0 0 0 0 0 0 0 0 0 0 0 7 10 5 0 0 0 0 0 0 0 0 (141) TYR344 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 3 0 0 0 0 0 0 prot.sequence eedfkegyilgfieaegSfSvSiKfQrDVfggvRlDpvfsiTqknrevleaikehlgigRiMeKAgQpntyvyvvDnfnelvklinflnkyadfmivkkrqflmfreianglvngehlhinglkrlvklayeltkeseKgYrkydlnhvlsiidkwdlg/eedfkegyilgfieaegSfSvSiKfQrDVfggvRlDpvfsiTqknrevleaikehlgigRiMeKAgQpntyvyvvDnfnelvklinflnkyadfmivkkrqflmfreianglvngehlhinglkrlvklayeltkeseKgYrkydlnhvlsiidkwdlg >3e6c_C:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CPRK OCPA DNA COMPLEX organism=Desulfitobacterium hafniense DNA sequence DG(B501):DC(A546) DC(B502):DG(A545) DA(B503):DT(A544) DT(B504):DA(A543) DT(B505):DA(A542) DA(B506):DT(A541) DA(B507):DT(A540) DC(B508):DG(A539) DA(B509):DT(A538) DT(B510):DA(A537) DG(B511):DC(A536) DC(B512):DG(A534) chainC (182) HIS190 0 0 0 8 2 0 0 0 0 0 0 0 (183) HIS191 0 0 0 0 0 0 3 0 0 0 0 0 (184) VAL192 0 0 0 6 5 8 0 0 0 0 0 0 (185) THR193 0 0 2 0 0 0 0 0 0 0 0 0 (187) SER195 0 0 0 0 0 2 2 0 0 0 0 0 (224) TYR232 0 19 4 1 0 0 0 0 0 0 0 0 prot.sequence dfcgaiipdnffpieklrnytqmglirdfakgsavimpgeeitsmiflvegkikldiifedgsekllyyaggnsligklyptgnniyatameptrtcwfsekslrtvfrtdedmifeifknyltkvayyarqvaemntynptirilrlfyelcssqgkrvgdtyeitmplsqksigeitgvHHVTvSrvlaslkrenildkkknkiivynlgelkhlseqtsyYs >3ebc_A:Restriction_endonuclease-like; title=STRUCTURE OF N141A HINCII WITH COGNATE DNA organism=Haemophilus influenzae DNA sequence DG(F1):DC(E14) DC(F2):DG(E13) DC(F3):DG(E12) DC(F4):DG(E11) DG(F5):DC(E10) DT(F6):DA(E9) DC(F7):DG(E8) DG(F8):DC(E7) DA(F9):DT(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DG(F13):DC(E2) DC(F14):DG(E1) chainA ( 95) GLN109 0 0 0 0 0 2 7 0 0 0 0 0 0 0 ( 96) ASN110 0 0 0 0 6 4 0 0 0 0 0 0 0 0 (121) GLN138 0 0 0 0 0 0 0 0 0 6 7 0 0 0 (182) TYR199 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (184) ASN201 0 0 0 0 0 0 0 0 0 8 9 0 0 0 (186) ALA203 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (187) ALA204 0 0 0 0 0 0 0 0 2 2 0 0 0 0 (188) ALA205 0 0 0 0 0 4 3 0 0 0 0 0 0 0 (190) GLN207 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (192) GLN209 0 0 0 0 0 0 0 0 0 2 2 0 0 0 prot.sequence sfikpiyqdinsiligqkvgepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniaQapaiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil >3ebc_AB:Restriction_endonuclease-like; title=STRUCTURE OF N141A HINCII WITH COGNATE DNA organism=Haemophilus influenzae DNA sequence DG(E1):DC(F14) DC(E2):DG(F13) DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DT(E6):DA(F9) DC(E7):DG(F8) DG(E8):DC(F7) DA(E9):DT(F6) DC(E10):DG(F5) DG(E11):DC(F4) DG(E12):DC(F3) DG(E13):DC(F2) DC(E14):DG(F1) chainA ( 95) GLN109 0 0 0 0 0 0 0 7 2 0 0 0 0 0 ( 96) ASN110 0 0 0 0 0 0 0 0 4 6 0 0 0 0 (121) GLN138 0 0 0 7 6 0 0 0 0 0 0 0 0 0 (182) TYR199 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (184) ASN201 0 0 0 9 8 0 0 0 0 0 0 0 0 0 (186) ALA203 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (187) ALA204 0 0 0 0 2 2 0 0 0 0 0 0 0 0 (188) ALA205 0 0 0 0 0 0 0 3 4 0 0 0 0 0 (190) GLN207 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (192) GLN209 0 0 0 2 2 0 0 0 0 0 0 0 0 0 chainB ( 97) GLN109 0 0 0 0 0 2 6 0 0 0 0 0 0 0 ( 98) ASN110 0 0 0 0 2 3 0 0 0 0 0 0 0 0 (122) SER136 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (124) GLN138 0 0 0 0 0 0 0 0 0 4 7 1 0 0 (185) TYR199 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (187) ASN201 0 0 0 0 0 0 0 0 0 8 6 0 0 0 (189) ALA203 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (190) ALA204 0 0 0 0 0 0 0 0 3 2 0 0 0 0 (191) ALA205 0 0 0 0 0 3 3 0 0 0 0 0 0 0 (193) GLN207 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (195) GLN209 0 0 0 0 0 0 0 0 0 1 4 0 0 0 prot.sequence sfikpiyqdinsiligqkvgepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniaQapaiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil/sfikpiyqdinsiligqkvkagepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniSaQapaiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil >3ecp_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF TN5 TRANSPOSASE COMPLEXED WITH 5' PHOSPHORYLATED TRANSPOSON END DNA organism=Escherichia coli DNA sequence DG(C3):DC(B18) DA(C4):DT(B17) DC(C5):DG(B16) DT(C6):DA(B15) DC(C7):DG(B14) DT(C8):DA(B13) DT(C9):DA(B12) DA(C10):DT(B11) DT(C11):DA(B10) DA(C12):DT(B9) DC(C13):DG(B8) DA(C14):DT(B7) DC(C15):DG(B6) DA(C16):DT(B5) DA(C17):DT(B4) DG(C18):DC(B3) DT(C19):DA(B2) DC(C20):DG(B1) chainA (241) GLN243 0 0 1 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) LYS244 10 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) VAL247 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) GLU326 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (328) LYS330 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (419) SER438 0 0 0 4 6 2 0 0 0 0 0 0 0 0 0 0 0 0 (420) LYS439 0 0 0 6 11 13 0 0 0 0 0 0 0 0 0 0 0 0 (421) ARG440 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence tsalhraadwaksvfssaalgdprrtarlvnvaaqlakysgksitissegskaaqegayrfirnpnvsaeairkagamqtvklaqefpellaiedttslsyrhqvaeelgklgsiqdksrgwwvhsvllleattfrtvgllhqewwmrpddpadadekesgkwlaaaatsrlrmgsmmsnviavcdreadihaylqdklahnerfvvrskhprkdvesglylydhlknqpelggyqisipQKgvVdkrgkrknrparkaslslrsgritlkqgnitlnavlaeeinppkgetplkwllltsepveslaqalrvidiythrwriEefhKawktgagaerqrmeepdnlermvsilsfvavrllqlresftpsqsaetvltpdecqllgyldkgkrkrkekagslqwaymaiarlggfmdSKRtgiaswgalwegwealqskldgflaakdlmaqgikig >3eeo_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=M. HHAI CO-CRYSTALLIZED WITH SYNTHETIC DSDNA CONTAINING A PROPANE DIOL IN PLACE OF THE DEOXYCYTIDINE RESIDUE TARGETED FOR METHYLATION. organism=Haemophilus parahaemolyticus DNA sequence DC(C402):DG(D433) DC(C403):DG(D432) DA(C404):DT(D431) DT(C405):DA(D430) DG(C406):DC(D429) DC(C407):DG(D428) DC(C409):DG(D426) DT(C410):DA(D425) DG(C411):DC(D424) DA(C412):DT(D423) DC(C413):DG(D422) chainA ( 86) ILE86 0 0 0 0 0 0 2 5 0 0 0 ( 87) SER87 0 0 0 0 0 5 7 0 0 0 0 (237) GLN237 0 0 0 0 0 21 32 0 0 0 0 (239) GLU239 0 0 0 0 1 3 0 0 0 0 0 (240) ARG240 0 0 0 0 0 0 12 12 0 0 0 (260) ALA260 0 0 0 1 0 0 0 0 0 0 0 (261) LYS261 0 0 0 1 0 0 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvrlgivgkggQgERiystrgiaitlsaygggifAKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy >3eh8_G:Homing_endonucleases; title=CRYSTAL STRUCTURE OF Y2 I-ANII VARIANT (F13Y/S111Y)/DNA COMPLEX WITH CALCIUM organism=Emericella nidulans DNA sequence DG(I1):DC(H30) DC(I2):DG(H29) DG(I3):DC(H28) DC(I4):DG(H27) DT(I5):DA(H26) DT(I6):DA(H25) DT(I7):DA(H24) DA(I8):DT(H23) DC(I9):DG(H22) DA(I10):DT(H21) DG(I11):DC(H20) DA(I12):DT(H19) DG(I13):DC(H18) DA(I14):DT(H17) DA(I15):DT(H16) DA(I16):DT(H15) DC(I17):DG(H14) DC(I18):DG(H13) DT(I19):DA(H12) DC(I20):DG(H11) DC(I21):DG(H10) DT(I22):DA(H9) DC(I23):DG(H8) DA(I24):DT(H7) DG(I25):DC(H6) DC(I26):DG(H5) DG(I27):DC(H4) DC(I28):DG(H3) DG(I29):DC(H2) DC(I30):DG(H1) chainG ( 18) TYR18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 17 2 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 ( 24) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 9 9 0 0 0 0 0 0 ( 27) TYR27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 ( 31) GLU31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 20 0 0 0 0 0 0 0 0 0 0 0 ( 61) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ILE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) MET66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 2 0 0 0 0 0 0 0 0 0 ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 13 0 0 0 0 0 0 0 0 (150) CYS150 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) SER152 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) TYR154 0 0 0 0 0 0 0 1 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LEU156 0 0 0 0 2 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) TYR162 0 0 0 0 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ILE164 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) SER166 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ASP168 0 0 0 0 0 0 0 0 0 1 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ALA170 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) TYR192 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) CYS198 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) LYS200 0 0 0 0 0 0 0 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) LYS202 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) THR204 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gsdltyaylvglyegdgYfSiTkKgkYltyElgiElsikdvqliykikkilgigivsfRkRneIeMvalRiRdknhlkskilpifekypmfsnkqydylrfrnallsgiiyledlpdytrsdeplnsiesiintsyfsawlvgfieaegCfSvYkLnkdddYlIaSfDiAqrdgdilisairkylsfttkvYldktnCsKlKvTsvrsveniikflqnapvkllgnkklqyklwlkqlrkisrysekikipsny >3ei1_B:WD40_repeat-like; title=STRUCTURE OF HSDDB1-DRDDB2 BOUND TO A 14 BP 6-4 PHOTOPRODUCT CONTAINING DNA-DUPLEX organism=DANIO RERIO DNA sequence DG(H2):DC(G14) DG(H3):DC(G13) DG(H4):DC(G12) DC(H5):DG(G11) DG(H6):DC(G10) DC(H7):DG(G9) DA(H8):5PY(G8) DA(H9):64T(G7) DT(H10):DA(G6) DC(H11):DG(G5) DG(H12):DC(G4) DC(H13):DG(G3) DG(H14):DC(G2) chainB (136) TRP236 0 0 0 0 0 0 0 1 0 0 0 0 0 (271) PHE371 0 0 0 0 0 0 1 3 13 0 0 0 0 (272) GLN372 0 0 0 0 0 56 3 0 0 0 0 0 0 (273) HIS373 0 0 0 0 0 0 0 0 47 0 0 0 0 prot.sequence gqtsilhyiyksslgqsihaqlrqclqepfirslksyklhrtaspfdrrvtslewhpthpttvavgskggdiilwdydvqnktsfiqgmgpgdaitgmkfnqfntnqlfvssirgattlrdfsgsviqvfaktdswdywyccvdvsvsrqmlatgdstgrllllgldgheifkeklhkakvthaefnprcdwlmatssvdatvklwdlrnikdknsyiaemphekpvnaayfnptdstkllttdqrneirvyssydwskpdqiiihphrqFQHltpikatwhpmydlivagrypddqlllndkrtidiydansgglvhqlrdpnaagiislnkfsptgdvlasgmgfniliwnre >3ei2_B:WD40_repeat-like; title=STRUCTURE OF HSDDB1-DRDDB2 BOUND TO A 16 BP ABASIC SITE CONTAINING DNA-DUPLEX organism=DANIO RERIO DNA sequence DA(G3):DT(H14) DT(G4):DA(H13) DG(G5):DC(H12) DA(G6):DT(H11) DA(G7):DT(H10) DT(G8):DA(H9) 3DR(G9):DT(H8) DA(G10):DT(H7) DA(G11):DT(H6) DG(G12):DC(H5) DC(G13):DG(H4) DA(G14):DT(H3) DG(G15):DC(H2) DG(G16):DC(H1) chainB ( 48) ARG148 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (136) TRP236 0 0 0 0 0 0 0 55 0 0 0 0 0 0 (271) PHE371 0 0 0 0 0 28 3 6 0 0 0 0 0 0 (272) GLN372 0 0 0 0 0 0 0 9 36 0 0 0 0 0 (273) HIS373 0 0 0 0 0 92 0 0 0 0 0 0 0 0 prot.sequence gqtsilhyiyksslgqsihaqlrqclqepfirslksyklhrtaspfdRrvtslewhpthpttvavgskggdiilwdydvqnktsfiqgmgpgdaitgmkfnqfntnqlfvssirgattlrdfsgsviqvfaktdsWdywyccvdvsvsrqmlatgdstgrllllgldgheifkeklhkakvthaefnprcdwlmatssvdatvklwdlrnikdknsyiaemphekpvnaayfnptdstkllttdqrneirvyssydwskpdqiiihphrQFQHltpikatwhpmydlivagrypddqlllndkrtidiydansgglvhqlrdpnaagiislnkfsptgdvlasgmgfniliwnre >3epg_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF HUMAN DNA POLYMERASE IOTA COMPLEXED WITH N2-ETHYLGUANINE organism=HOMO SAPIENS DNA sequence DG(C842):DC(B12) DG(C843):DC(B11) DT(C844):DA(B10) DC(C845):DG(B9) DC(C846):DG(B8) DT(C847):DA(B7) chainA (281) GLU305 2 0 0 0 0 0 (319) ARG343 0 0 0 0 0 1 (333) GLN361 0 0 0 0 0 2 prot.sequence assrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirrysygresrQcpipshviqkdvmtpmvdilmklfrnmvnvltllsvcfcnlk >3epi_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF HUMAN DNA POLYMERASE IOTA COMPLEXED WITH N2-ETHYLGUANINE AND INCOMING TTP organism=HOMO SAPIENS DNA sequence DA(B7):DT(C847) DG(B8):DC(C846) DG(B9):DC(C845) DA(B10):DT(C844) DC(B11):DG(C843) DC(B12):DG(C842) DOC(B13):DG(C841) chainA (281) GLU305 0 0 0 0 0 3 5 (330) SER359 0 1 0 0 0 0 0 (332) GLN361 2 0 0 0 0 0 0 prot.sequence assrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirrysgreSrQcpipshviqkdvmtpmvdilmklfrnmvnltllsvcfcnlk >3ere_D:C-terminal_domain_of_arginine_repressor;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ARGININE REPRESSOR PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH THE DNA OPERATOR organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DT(A1):DA(B16) DT(A2):DA(B15) DG(A3):DC(B14) DC(A4):DG(B13) DA(A5):DT(B12) DT(A6):DA(B11) DA(A7):DT(B10) DA(A8):DT(B9) DC(A9):DG(B8) DG(A10):DC(B7) DA(A11):DT(B6) DT(A12):DA(B5) DG(A13):DC(B4) DC(A14):DG(B3) DA(A15):DT(B2) DA(A16):DT(B1) chainD ( 38) THR52 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN53 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 ( 40) ALA54 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER57 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 ( 44) ARG58 0 9 11 4 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aanragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr >3exj_A:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF A P53 CORE TETRAMER BOUND TO DNA organism=Mus musculus DNA sequence DG(C13):DC(D12) DA(C14):DT(D11) DG(C15):DC(D10) DC(C16):DG(D9) DA(C17):DT(D8) DT(C18):DA(D7) DG(C19):DC(D6) DC(C20):DG(D5) DT(C21):DA(D4) DC(C22):DG(D3) DA(C23):DT(D2) chainA (148) ARG245 0 0 0 4 0 0 0 0 0 0 0 (176) ALA273 0 0 0 0 0 0 1 1 0 0 0 (177) CYS274 0 0 0 0 0 0 0 1 0 0 0 (180) ARG277 0 0 0 0 0 12 12 2 0 0 0 prot.sequence ktyqgnygfhlgflqsgtaksvmctyspplnklfcqlaktcpvqlwvsatppagsrvramaiykksqhmtevvrrcphhercsdgdglappqhlirvegnlypeyledrqtfrhsvvvpyeppeagseyttihykymcnsscmggmnRrpiltiitledssgnllgrdsfevrvcACpgRdrrteeenfrkkev >3exj_AB:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF A P53 CORE TETRAMER BOUND TO DNA organism=Mus musculus DNA sequence DG(C13):DC(D12) DA(C14):DT(D11) DG(C15):DC(D10) DC(C16):DG(D9) DA(C17):DT(D8) DT(C18):DA(D7) DG(C19):DC(D6) DC(C20):DG(D5) DT(C21):DA(D4) DC(C22):DG(D3) DA(C23):DT(D2) chainA (148) ARG245 0 0 0 4 0 0 0 0 0 0 0 (176) ALA273 0 0 0 0 0 0 1 1 0 0 0 (177) CYS274 0 0 0 0 0 0 0 1 0 0 0 (180) ARG277 0 0 0 0 0 12 12 2 0 0 0 chainB (178) ALA273 0 0 0 1 0 0 0 0 0 0 0 (179) CYS274 0 0 1 0 0 0 0 0 0 0 0 (182) ARG277 0 0 1 12 12 0 0 0 0 0 0 prot.sequence ktyqgnygfhlgflqsgtaksvmctyspplnklfcqlaktcpvqlwvsatppagsrvramaiykksqhmtevvrrcphhercsdgdglappqhlirvegnlypeyledrqtfrhsvvvpyeppeagseyttihykymcnsscmggmnRrpiltiitledssgnllgrdsfevrvcACpgRdrrteeenfrkkev/sqktyqgnygfhlgflqsgtaksvmctyspplnklfcqlaktcpvqlwvsatppagsrvramaiykksqhmtevvrrcphhercsdgdglappqhlirvegnlypeyledrqtfrhsvvvpyeppeagseyttihykymcnsscmggmnrrpiltiitledssgnllgrdsfevrvcACpgRdrrteeenfrkk >3exl_A:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF A P53 CORE TETRAMER BOUND TO DNA organism=Mus musculus DNA sequence DG(D3):DC(C22) DA(D4):DT(C21) DG(D5):DC(C20) DC(D6):DG(C19) DA(D7):DT(C18) chainA (177) ALA273 0 0 1 1 0 (178) CYS274 0 0 1 0 0 (181) ARG277 0 0 1 12 12 prot.sequence qktyqgnygfhlgflqsgtaksvmctyspplnklfcqlaktcpvqlwvsatppagsrvramaiykksqhmtevvrrcphhercsdgdglappqhlirvegnlypeyledrqtfrhsvvvpyeppeagseyttihykymcnsscmggmnrrpiltiitledssgnllgrdsfevrvcACpgRdrrteeenfrkke >3eyi_AB:"Winged_helix"_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF THE SECOND Z-DNA BINDING DOMAIN OF HUMAN DAI (ZBP1) IN COMPLEX WITH Z-DNA organism=Homo sapiens DNA sequence DC(C1):DG(D6) DG(C2):DC(D5) DC(C3):DG(D4) DG(C4):DC(D3) DC(C5):DG(D2) DG(C6):DC(D1) chainA ( 41) ARG142 0 0 0 0 0 2 ( 44) TYR145 0 0 0 11 0 0 chainB ( 47) TYR145 0 0 14 0 0 0 prot.sequence spqfsqqreediyrflkdngpqralviaqalgmrtaKdvnRdlYrmksrhlldmdeqskawtiy/hmaspqfsqqreediyrflkdngpqralviaqalgmrtakdvnrdlYrmksrhlldmdeqskawtiy >3eyi_B:"Winged_helix"_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF THE SECOND Z-DNA BINDING DOMAIN OF HUMAN DAI (ZBP1) IN COMPLEX WITH Z-DNA organism=Homo sapiens DNA sequence DC(D1):DG(C6) DG(D2):DC(C5) DC(D3):DG(C4) DG(D4):DC(C3) DC(D5):DG(C2) DG(D6):DC(C1) chainB ( 47) TYR145 0 0 0 14 0 0 prot.sequence hmaspqfsqqreediyrflkdngpqralviaqalgmrtakdvnrdlYrmksrhlldmdeqskawtiy >3eyz_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=COCRYSTAL STRUCTURE OF BACILLUS FRAGMENT DNA POLYMERASE I WITH DUPLEX DNA (OPEN FORM) organism=Bacillus stearothermophilus DNA sequence DG(C3):DC(B30) DC(C4):DG(B29) DG(C5):DC(B28) DA(C6):DT(B27) DG(C7):DC(B26) DT(C8):DA(B25) DC(C9):DG(B24) DA(C10):DT(B23) DG(C11):DC(B22) DG(C12):DC(B21) chainA (286) LYS582 0 0 0 3 4 0 0 0 0 0 (319) ARG615 8 3 0 0 0 0 0 0 0 0 (326) ASN622 0 0 1 0 0 0 0 0 0 0 (329) ASN625 0 1 7 2 0 0 0 0 0 0 (418) TYR714 54 0 0 0 0 0 0 0 0 0 (501) GLN797 4 0 0 0 0 0 0 0 0 0 (533) HIS829 1 1 0 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3ez5_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=COCRYSTAL STRUCTURE OF BACILLUS FRAGMENT DNA POLYMERASE I WITH DUPLEX DNA , DCTP, AND ZINC (CLOSED FORM). organism=Bacillus stearothermophilus DNA sequence DC(B21):DG(C12) DC(B22):DG(C11) DT(B23):DA(C10) DG(B24):DC(C9) DA(B25):DT(C8) DC(B26):DG(C7) DT(B27):DA(C6) DC(B28):DG(C5) DG(B29):DC(C4) DAD(A201):DT(C3) chainA (286) LYS582 0 0 0 0 3 7 0 0 0 0 (319) ARG615 0 0 0 0 0 0 0 3 12 1 (329) ASN625 0 0 0 0 0 3 4 1 0 0 (333) ARG629 0 0 0 0 0 0 0 7 4 0 (357) ASP653 0 0 0 0 0 0 0 0 0 6 (359) SER655 0 0 0 0 0 0 0 0 0 2 (360) GLN656 0 0 0 0 0 0 0 0 0 5 (361) ILE657 0 0 0 0 0 0 0 0 0 2 (386) HIS682 0 0 0 0 0 0 0 0 0 7 (406) ARG702 0 0 0 0 0 0 0 0 0 7 (410) LYS706 0 0 0 0 0 0 0 0 0 13 (411) ALA707 0 0 0 0 0 0 0 0 0 2 (414) TYR710 0 0 0 0 0 0 0 0 0 18 (418) TYR714 0 0 0 0 0 0 0 0 0 8 (420) ILE716 0 0 0 0 0 0 0 0 0 5 (428) ASN724 0 0 0 0 0 0 0 0 0 1 (497) ASN793 0 0 0 0 0 0 0 0 1 0 (501) GLN797 0 0 0 0 0 0 0 1 3 0 (533) HIS829 0 0 0 0 0 0 0 2 0 0 (534) ASP830 0 0 0 0 0 0 0 0 0 6 prot.sequence kkmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnygivYgIsdyglaqNlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3f21_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ZALPHA IN COMPLEX WITH D(CACGTG) organism=Homo sapiens DNA sequence DC(D1) DA(D2) DC(D3) DG(D4) DT(D5) DG(D6) chainA ( 45) TYR177 0 0 0 14 0 0 prot.sequence lsiyqdqeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkiav >3f22_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ZALPHA IN COMPLEX WITH D(CGTACG) organism=Homo sapiens DNA sequence DC(D1):DG(E6) DG(D2):DC(E5) DT(D3):DA(E4) DA(D4):DT(E3) DC(D5):DG(E2) DG(D6):DC(E1) chainA ( 44) TYR177 0 0 0 16 0 0 prot.sequence siyqdqeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkia >3f23_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ZALPHA IN COMPLEX WITH D(CGGCCG) organism=Homo sapiens DNA sequence DC(D1):DG(E6) DG(D2):DC(E5) DG(D3):DC(E4) DC(D4):DG(E3) DC(D5):DG(E2) DG(D6):DC(E1) chainA ( 44) TYR177 0 0 0 19 0 0 chainB ( 41) TYR177 0 0 32 0 0 0 prot.sequence siyqdqeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkia/qdqeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkia >3f23_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ZALPHA IN COMPLEX WITH D(CGGCCG) organism=Homo sapiens DNA sequence DC(E1):DG(D6) DG(E2):DC(D5) DG(E3):DC(D4) DC(E4):DG(D3) DC(E5):DG(D2) DG(E6):DC(D1) chainB ( 41) TYR177 0 0 0 16 0 0 prot.sequence qdqeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkia >3f27_D:HMG-box; title=STRUCTURE OF SOX17 BOUND TO DNA organism=Mus musculus DNA sequence DC(B1):DG(A16) DC(B2):DG(A15) DA(B3):DT(A14) DG(B4):DC(A13) DG(B5):DC(A12) DA(B6):DT(A11) DC(B7):DG(A10) DA(B8):DT(A9) DA(B9):DT(A8) DT(B10):DA(A7) DA(B11):DT(A6) DG(B12):DC(A5) DA(B13):DT(A4) DG(B14):DC(A3) DA(B15):DT(A2) DC(B16):DG(A1) chainD ( 3) ARG70 0 0 0 0 1 9 9 0 0 0 0 0 0 0 0 0 ( 6) ASN73 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 ( 8) PHE75 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 ( 9) MET76 0 0 0 0 0 0 0 14 10 0 0 0 0 0 0 0 ( 16) ARG83 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 ( 27) HIS94 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 ( 28) ASN95 0 0 0 0 0 0 0 0 0 8 11 0 0 0 0 0 ( 32) SER99 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 ( 70) TYR137 0 0 0 0 2 7 1 0 0 0 0 0 0 0 0 0 prot.sequence irRpmNaFMvwakdeRkrlaqqnpdlHNaelSkmlgkswkaltlaekrpfveeaerlrvqhmqdhpnykYrprr >3f2b_A:PHP_domain-like;Nucleic_acid-binding_proteins; title=DNA POLYMERASE POLC FROM GEOBACILLUS KAUSTOPHILUS COMPLEX WITH DNA, DGTP, MG AND ZN organism=GEOBACILLUS KAUSTOPHILUS DNA sequence DG(T6):DC(P17) DG(T7):DC(P16) DT(T8):DA(P15) DT(T9):DA(P14) DG(T10):DC(P13) DC(T11):DG(P12) DC(T12):DG(P11) DC(T13):DG(P10) DG(T14):DC(P9) DT(T15):DA(P8) DC(T16):DG(P7) DT(T17):DA(P6) DC(T18):DG(P5) chainA (443) ARG893 5 0 0 0 0 0 0 0 0 0 0 0 0 (601) PRO1051 0 1 3 1 0 0 0 0 0 0 0 0 0 (736) HIS1186 1 0 0 0 0 0 0 0 0 0 0 0 0 (888) LYS1338 0 0 0 0 0 2 2 0 0 0 0 0 0 prot.sequence vrrletiveeerrvvvqgyvfdaevselksgrtlltmkitdytnsilvkmfsrdkedaelmsgvkkgmwvkvrgsvqndtfvrdlviiandlneiaanerqdtapegekrvelhlhtpmsqmdavtsvtklieqakkwghpaiavtdhavvqsfpeaysaakkhgmkviygleanivddpfhvtllaqnetglknlfklvslshiqyfhrvpriprsvlvkhrdgllvgsgcdkgelfdnvediarfydflevhppdvykplyvkdeemikniirsivalgekldipvvatgnvhylnpedkiyrkilihsqgganplnrhelpdvyfrttnemldcfsflgpekakeivvdntqkiasligdvkpikdelytpriegadeeiremsyrrakeiygdplpklveerlekelksiighgfaviylishklvkkslddgylvgsRgsvgssfvatmteitevnplpphyvcpnckhseffndgsvgsgfdlpdkncprcgtkykkdghdipfetflgfkgdkvpdidlnfsgeyqprahnytkvlfgednvyragtigtvadktaygfvkayasdhnlelrgaeidrlaagctgvkrttgqhPggiivvpdymeiydftpiqypaddtssewrtthfdfhsihdnllkldilghddptvirmlqdlsgidpktiptddpdvmgifssteplgvtpeqimcnvgtigipEfgtrfvrqmleetrpktfselvqisglsHgtdvwlgnaqeliqngtctlsevigcrddimvyliyrglepslafkimesvrkgkgltpefeaemrkhdvpewyidsckkikymfpkahaaayvlmavriayfkvhhpllyyasyftvraedfdldamikgsaairkrieeinakgiqataKekslltvlevalemcergfsfknidlyrsqatefvidgnslippfnaipglgtnvaqaivrareegeflskedlqqrgklsktlleylesrgcldslpdhnqlslf >3f2c_A:PHP_domain-like;Nucleic_acid-binding_proteins;AF1531-like; title=DNA POLYMERASE POLC FROM GEOBACILLUS KAUSTOPHILUS COMPLEX WITH DNA, DGTP AND MN organism=GEOBACILLUS KAUSTOPHILUS DNA sequence DG(P5):DC(T18) DA(P6):DT(T17) DG(P7):DC(T16) DA(P8):DT(T15) DC(P9):DG(T14) DG(P10):DC(T13) DG(P11):DC(T12) DG(P12):DC(T11) DC(P13):DG(T10) DA(P14):DT(T9) DA(P15):DT(T8) DC(P16):DG(T7) DC(P17):DG(T6) chainA (442) ARG893 0 0 0 0 0 0 0 0 0 0 0 0 5 (600) PRO1051 0 0 0 0 0 0 0 0 0 1 2 1 0 (735) HIS1186 0 0 0 0 0 0 0 0 0 0 0 0 1 (887) LYS1338 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence vrrletiveeerrvvvqgyvfdaevselksgrtlltmkitdytnsilvkmfsrdkedaelmsgvkkgmwvkvrgsvqndtfvrdlviiandlneiaanerqdtapegekrvelhlhtpmsqmdavtsvtklieqakkwghpaiavtdhavvqsfpeaysaakkhgmkviygleanivddpfhvtllaqnetglknlfklvslshiqyfhrvpriprsvlvkhrdgllvgsgcdkgelfdnvediarfydflevhppdvykplvkdeemikniirsivalgekldipvvatgnvhylnpedkiyrkilihsqgganplnrhelpdvyfrttnemldcfsflgpekakeivvdntqkiasligdvkpikdelytpriegadeeiremsyrrakeiygdplpklveerlekelksiighgfaviylishklvkkslddgylvgsRgsvgssfvatmteitevnplpphyvcpnckhseffndgsvgsgfdlpdkncprcgtkykkdghdipfetflgfkgdkvpdidlnfsgeyqprahnytkvlfgednvyragtigtvadktaygfvkayasdhnlelrgaeidrlaagctgvkrttgqhPggiivvpdymeiydftpiqypaddtssewrtthfdfhsihdnllkldilghddptvirmlqdlsgidpktiptddpdvmgifssteplgvtpeqimcnvgtigipEfgtrfvrqmleetrpktfselvqisglsHgtdvwlgnaqeliqngtctlsevigcrddimvyliyrglepslafkimesvrkgkgltpefeaemrkhdvpewyidsckkikymfpkahaaayvlmavriayfkvhhpllyyasyftvraedfdldamikgsaairkrieeinakgiqataKekslltvlevalemcergfsfknidlyrsqatefvidgnslippfnaipglgtnvaqaivrareegeflskedlqqrgklsktlleylesrgcldslpdhnqlslf >3f2d_A:PHP_domain-like;Nucleic_acid-binding_proteins;AF1531-like; title=DNA POLYMERASE POLC FROM GEOBACILLUS KAUSTOPHILUS COMPLEX WITH DNA, DGTP, MN AND ZN organism=GEOBACILLUS KAUSTOPHILUS DNA sequence DG(P5):DC(T18) DA(P6):DT(T17) DG(P7):DC(T16) DA(P8):DT(T15) DC(P9):DG(T14) DG(P10):DC(T13) DG(P11):DC(T12) DG(P12):DC(T11) DC(P13):DG(T10) DA(P14):DT(T9) DA(P15):DT(T8) DC(P16):DG(T7) DC(P17):DG(T6) chainA (442) ARG893 0 0 0 0 0 0 0 0 0 0 0 1 5 (600) PRO1051 0 0 0 0 0 0 0 0 0 2 3 1 0 (735) HIS1186 0 0 0 0 0 0 0 0 0 0 0 0 1 (887) LYS1338 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence vrrletiveeerrvvvqgyvfdaevselksgrtlltmkitdytnsilvkmfsrdkedaelmsgvkkgmwvkvrgsvqndtfvrdlviiandlneiaanerqdtapegekrvelhlhtpmsqmdavtsvtklieqakkwghpaiavtdhavvqsfpeaysaakkhgmkviygleanivddpfhvtllaqnetglknlfklvslshiqyfhrvpriprsvlvkhrdgllvgsgcdkgelfdnvediarfydflevhppdvykplvkdeemikniirsivalgekldipvvatgnvhylnpedkiyrkilihsqgganplnrhelpdvyfrttnemldcfsflgpekakeivvdntqkiasligdvkpikdelytpriegadeeiremsyrrakeiygdplpklveerlekelksiighgfaviylishklvkkslddgylvgsRgsvgssfvatmteitevnplpphyvcpnckhseffndgsvgsgfdlpdkncprcgtkykkdghdipfetflgfkgdkvpdidlnfsgeyqprahnytkvlfgednvyragtigtvadktaygfvkayasdhnlelrgaeidrlaagctgvkrttgqhPggiivvpdymeiydftpiqypaddtssewrtthfdfhsihdnllkldilghddptvirmlqdlsgidpktiptddpdvmgifssteplgvtpeqimcnvgtigipEfgtrfvrqmleetrpktfselvqisglsHgtdvwlgnaqeliqngtctlsevigcrddimvyliyrglepslafkimesvrkgkgltpefeaemrkhdvpewyidsckkikymfpkahaaayvlmavriayfkvhhpllyyasyftvraedfdldamikgsaairkrieeinakgiqataKekslltvlevalemcergfsfknidlyrsqatefvidgnslippfnaipglgtnvaqaivrareegeflskedlqqrgklsktlleylesrgcldslpdhnqlslf >3f73_B:Ribonuclease_H-like; title=ALIGNMENT OF GUIDE-TARGET SEED DUPLEX WITHIN AN ARGONAUTE SILENCING COMPLEX organism=THERMUS THERMOPHILUS DNA sequence DT(X1) DG(X2) DA(X3) DG(X4) DG(X5) DT(X6) DA(X7) DG(X8) DT(X9) DA(X10) DA(X17) DT(X18) DA(X19) DG(X20) DT(X21) chainB ( 45) GLN48 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 48) ARG51 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 49) ARG52 0 0 0 0 0 0 0 0 0 0 0 15 25 0 0 ( 79) MET82 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (214) LEU217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (215) PRO218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (223) TYR226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (249) LYS252 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (251) ILE254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (252) PRO255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (263) THR266 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (274) SER280 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (406) PRO412 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) MET413 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (409) TRP415 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ARG418 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (428) ILE434 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (430) ASN436 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) HIS445 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) ARG446 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ASN449 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (600) ARG615 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (632) PHE647 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lgktevflnrfalrplnpeelrpwrlevvldpppgreevypllaQvaRRaggvtvrmgdglaswsppevlvlegtlarMgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpkelpLPgglslldYhaskgrlqgreggrvawvadpkdprKpIPhltgllvpvlTledlhgslalSlpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltpPMaWedRnrlkalllreglpsqIlNvplreeerHRweNallgllakaglqvvalsgypaelavgfdaggresfrfggaacavggghllwtlpeaqaipqevvwdlleetlwafrragrlpsrvlllrdgrvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrrgtpRplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >3f8i_B:PUA_domain-like; title=MOUSE UHRF1 SRA DOMAIN BOUND WITH HEMI-METHYLATED CPG, CRYSTAL STRUCTURE IN SPACE GROUP P21 organism=Mus musculus DNA sequence DG(G421):DC(F413) DT(G422):DA(F412) DC(G423):DG(F411) DA(G424):DT(F410) DG(G425):DC(F409) DC(G426):DG(F408) DG(G427):5CM(F407) DC(G428):DG(F406) DA(G430):DT(F405) DT(G431):DA(F404) DG(G432):DC(F403) DG(G433):DC(F402) chainB ( 34) HIS450 0 0 0 0 0 0 6 9 3 0 0 0 ( 35) VAL451 0 0 0 0 0 0 2 7 0 0 0 0 ( 38) ILE454 0 0 0 0 0 0 1 0 0 0 0 0 ( 52) ALA468 0 0 0 0 0 0 1 0 0 0 0 0 ( 55) TYR471 0 0 0 0 0 0 22 0 0 0 0 0 ( 58) ASP474 0 0 0 0 0 0 11 0 0 0 0 0 ( 67) TYR483 0 0 0 0 0 0 25 0 0 0 0 0 ( 68) THR484 0 0 0 0 0 0 1 0 0 0 0 0 ( 70) SER486 0 0 0 0 0 0 1 0 0 0 0 0 ( 75) LEU491 0 0 0 0 0 0 0 1 0 0 0 0 ( 78) ASN494 0 0 0 0 0 12 0 0 0 0 0 0 ( 79) LYS495 0 0 0 0 1 0 0 0 0 0 0 0 ( 80) ARG496 0 0 0 0 0 46 14 31 0 0 0 0 prot.sequence hmpanhfgpipgvpvgtmwrfrvqvsesgvhrpHVagihgrsndgayslvlaggyeddvdngnyftytgsggrdLsgNKRtagqssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtrqlgltmqypegylealank >3f8j_B:PUA_domain-like; title=MOUSE UHRF1 SRA DOMAIN BOUND WITH HEMI-METHYLATED CPG, CRYSTAL STRUCTURE IN SPACE GROUP C222(1) organism=Mus musculus DNA sequence DC(F402):DG(G433) DC(F403):DG(G432) DA(F404):DT(G431) DT(F405):DA(G430) DG(F406):DC(G428) 5CM(F407):DG(G427) DG(F408):DC(G426) DC(F409):DG(G425) DT(F410):DA(G424) DG(F411):DC(G423) DA(F412):DT(G422) DC(F413):DG(G421) chainB ( 34) HIS450 0 0 0 3 18 6 0 0 0 0 0 0 ( 35) VAL451 0 0 0 0 18 2 0 0 0 0 0 0 ( 52) ALA468 0 0 0 0 0 1 0 0 0 0 0 0 ( 55) TYR471 0 0 0 0 0 22 0 0 0 0 0 0 ( 58) ASP474 0 0 0 0 0 11 0 0 0 0 0 0 ( 67) TYR483 0 0 0 0 0 26 0 0 0 0 0 0 ( 68) THR484 0 0 0 0 0 1 0 0 0 0 0 0 ( 70) SER486 0 0 0 0 0 1 0 0 0 0 0 0 ( 75) LEU491 0 0 0 0 2 0 0 0 0 0 0 0 ( 78) ASN494 0 0 0 0 0 0 8 0 0 0 0 0 ( 79) LYS495 0 0 0 0 0 0 0 1 0 0 0 0 ( 80) ARG496 0 0 0 0 58 14 22 0 0 0 0 0 ( 81) THR497 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence ivpanhfgpipgvpvgtmwrfrvqvsesgvhrpHVagihgrsndgayslvlaggyeddvdngnyftytgsggrdLsgNKRTagqssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtrqlgltmqypegylealank >3fbd_A:His-Me_finger_endonucleases; title=CRYSTAL STRUCTURE OF THE NUCLEASE DOMAIN OF COLE7(D493Q MUTANT) IN COMPLEX WITH AN 18-BP DUPLEX DNA organism=ESCHERICHIA COLI DNA sequence DG(C19):DC(B18) DG(C20):DC(B17) DA(C21):DT(B16) DA(C22):DT(B15) DT(C23):DA(B14) DT(C24):DA(B13) DC(C25):DG(B12) DG(C26):DC(B11) DA(C27):DT(B10) DT(C28):DA(B9) DC(C29):DG(B8) DG(C30):DC(B7) DA(C31):DT(B6) DA(C32):DT(B5) DT(C33):DA(B4) DT(C34):DA(B3) DC(C35):DG(B2) DC(C36):DG(B1) chainA ( 3) ARG447 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 49) GLN493 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG496 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG538 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 prot.sequence skRnkpgkatgkgkpvnnkwlnnagkdlgspvpdrianklrdkefksfQdfRkkfweevskdpelskqfsrnnndrmkvgkapktrtqdvsgkRtsfelhhekpisqnggvydmdnisvvtpkrhidihrgk >3fc3_AB:His-Me_finger_endonucleases; title=CRYSTAL STRUCTURE OF THE BETA-BETA-ALPHA-ME TYPE II RESTRICTION ENDONUCLEASE HPY99I organism=Helicobacter pylori DNA sequence DT(D-4):DA(C4) DA(D-3):DT(C3) DC(D-2):DG(C2) DG(D-1):DC(C1) DT(D0):DA(C0) DC(D1):DG(C-1) DG(D2):DC(C-2) DA(D3):DT(C-3) DG(D4):DC(C-4) chainA ( 82) ILE82 0 0 0 0 0 0 0 1 0 ( 83) ASN83 0 0 0 0 3 7 7 4 0 ( 84) GLN84 0 0 0 0 9 8 10 0 0 ( 92) THR92 0 0 0 0 1 0 0 0 0 ( 94) ARG94 0 0 0 0 0 2 12 4 0 (101) ARG101 0 0 0 0 0 0 2 0 0 (162) ASP162 0 0 0 0 0 3 5 0 0 (166) THR166 0 0 0 0 0 9 4 0 0 (170) ARG170 0 0 0 3 5 5 0 0 0 chainB ( 80) GLU81 4 0 0 0 0 0 0 0 0 ( 82) ASN83 0 3 7 7 2 0 0 0 0 ( 83) GLN84 0 0 10 7 4 0 0 0 0 ( 93) ARG94 0 6 13 2 0 0 0 0 0 (100) ARG101 0 0 1 0 0 0 0 0 0 (161) ASP162 0 0 5 3 0 0 0 0 0 (165) THR166 0 0 4 9 0 0 0 0 0 (169) ARG170 0 0 0 5 5 3 0 0 0 prot.sequence mlknddfviaknqlgnivpnsvgviravngksamvlfiglnelkrvdfseleaidiyrtgkgydkkicnichilkntdgfEINQtdakgrkTtRpscrecRknidgvklsstekkkmdeiappkgsvftcpicekrsivgvtanlvhdhnhdtgwgrewicDscnTglgRfkdnpkflekvieylkkye/lknddfviaknqlgnivpnsvgviravngksamvlfiglnelkrvdfseleaidiyrtgkgydkkicnichilkntdgfEiNQtdakgrkttRpscrecRknidgvklsstekkkmdeiappkgsvftcpicekrsivgvtanlvhdhnhdtgwgrewicDscnTglgRfkdnpkflekvieylkkye >3fc3_B:His-Me_finger_endonucleases; title=CRYSTAL STRUCTURE OF THE BETA-BETA-ALPHA-ME TYPE II RESTRICTION ENDONUCLEASE HPY99I organism=Helicobacter pylori DNA sequence DC(C-4):DG(D4) DT(C-3):DA(D3) DC(C-2):DG(D2) DG(C-1):DC(D1) DA(C0):DT(D0) DC(C1):DG(D-1) DG(C2):DC(D-2) DT(C3):DA(D-3) DA(C4):DT(D-4) chainB ( 80) GLU81 0 0 0 0 0 0 0 0 4 ( 82) ASN83 0 0 0 0 2 7 7 3 0 ( 83) GLN84 0 0 0 0 4 7 10 0 0 ( 93) ARG94 0 0 0 0 0 2 13 6 0 (100) ARG101 0 0 0 0 0 0 1 0 0 (161) ASP162 0 0 0 0 0 3 5 0 0 (165) THR166 0 0 0 0 0 9 4 0 0 (169) ARG170 0 0 0 3 5 5 0 0 0 prot.sequence lknddfviaknqlgnivpnsvgviravngksamvlfiglnelkrvdfseleaidiyrtgkgydkkicnichilkntdgfEiNQtdakgrkttRpscrecRknidgvklsstekkkmdeiappkgsvftcpicekrsivgvtanlvhdhnhdtgwgrewicDscnTglgRfkdnpkflekvieylkkye >3fd2_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF MMSOI/DNA COMPLEX WITH CALCIUM organism=MONOMASTIX SP. OKE-1, UNIDENTIFIED DNA sequence DC(C551):DG(B524) DG(C552):DC(B523) DG(C553):DC(B522) DA(C554):DT(B521) DA(C555):DT(B520) DC(C556):DG(B519) DT(C557):DA(B518) DG(C558):DC(B517) DT(C559):DA(B516) DC(C560):DG(B515) DT(C561):DA(B514) DC(C562):DG(B513) DA(C563):DT(B512) DC(C564):DG(B511) DG(C565):DC(B510) DA(C566):DT(B509) DC(C567):DG(B508) DG(C568):DC(B507) DT(C569):DA(B506) DT(C570):DA(B505) DC(C571):DG(B504) DT(C572):DA(B503) DG(C573):DC(B502) DC(C574):DG(B501) chainA ( 20) SER24 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) TYR26 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS28 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ILE30 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG32 0 0 15 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASP34 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR35 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ILE49 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG72 0 0 0 0 0 0 8 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG75 0 0 0 0 0 0 0 0 20 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ASP77 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ILE79 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASP81 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ILE85 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) SER227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (197) TYR229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 (199) LYS231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 (201) ILE233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 (202) PRO234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (203) ARG235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 19 0 0 (205) ASP237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 (206) TYR238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 (220) ILE252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (241) ASN273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (243) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 9 0 0 0 0 0 0 (246) ARG278 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 13 0 0 0 0 0 0 0 0 (248) ASP280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (250) ILE282 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (252) ASP284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (256) ILE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence ntlqpteaayiagfldgdgSiYaKlIpRpDYkdikyqvslaiSfIqrkdkfpylqdiydqlgkrgnlRkdRgDgIaDytiIgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagkiessptgsgsgskkntlqpteaayiagfldgdgSiYaKlIPRpDYkdikyqvslaisfIqrkdkfpylqdiydqlgkrgNlRkdRgDgIaDytiIgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagkie >3fde_A:PUA_domain-like; title=MOUSE UHRF1 SRA DOMAIN BOUND WITH HEMI-METHYLATED CPG DNA, CRYSTAL STRUCTURE IN SPACE GROUP C222(1) AT 1.4 A RESOLUTION organism=Mus musculus DNA sequence DC(D402):DG(E432) DC(D403):DG(E431) DA(D404):DT(E430) DT(D405):DA(E429) DG(D406):DC(E428) 5CM(D407):DG(E427) DG(D408):DC(E426) DC(D409):DG(E425) DT(D410):DA(E424) DG(D411):DC(E423) DA(D412):DT(E422) DC(D413):DG(E421) chainA ( 34) HIS450 0 0 0 0 18 7 0 0 0 0 0 0 ( 35) VAL451 0 0 0 0 14 3 0 0 0 0 0 0 ( 52) ALA468 0 0 0 0 0 1 0 0 0 0 0 0 ( 55) TYR471 0 0 0 0 0 23 0 0 0 0 0 0 ( 58) ASP474 0 0 0 0 0 11 0 0 0 0 0 0 ( 67) TYR483 0 0 0 0 0 28 0 0 0 0 0 0 ( 68) THR484 0 0 0 0 0 2 0 0 0 0 0 0 ( 70) SER486 0 0 0 0 0 1 0 0 0 0 0 0 ( 75) LEU491 0 0 0 0 4 0 0 0 0 0 0 0 ( 78) ASN494 0 0 0 0 0 0 6 0 0 0 0 0 ( 79) LYS495 0 0 0 0 0 0 0 1 0 0 0 0 ( 80) ARG496 0 0 0 0 62 13 24 0 0 0 0 0 prot.sequence mpanhfgpipgvpvgtmwrfrvqvsesgvhrpHVagihgrsndgayslvlaggyeddvdngnyftytgsggrdLsgNKRTagqssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtrqlgltmqypegylealankeksr >3fdq_A: title=RECOGNITION OF AT-RICH DNA BINDING SITES BY THE MOGR REPRESSOR organism=Listeria monocytogenes DNA sequence DT(C2):DA(D15) DT(C3):DA(D14) DT(C4):DA(D13) DT(C5):DA(D12) DT(C6):DA(D11) DT(C7):DA(D10) DA(C8):DT(D9) DA(C9):DT(D8) DA(C10):DT(D7) DA(C11):DT(D6) DA(C12):DT(D5) DA(C13):DT(D4) DA(C14):DT(D3) DT(C15):DA(D2) chainA ( 91) VAL94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (111) SER114 0 0 0 0 0 0 0 0 0 5 1 0 0 0 (114) GLN117 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (115) ASN118 0 0 0 0 0 0 0 0 3 7 1 0 0 0 (118) TYR121 0 0 0 0 0 0 0 0 0 0 0 5 10 0 (135) PRO138 0 0 0 0 2 6 2 0 0 0 0 0 0 0 (137) ARG140 0 3 5 11 4 0 0 0 0 0 0 0 0 0 prot.sequence seirkllqeikkqvdnpgnsstteikkmaseagideqtaeeiyhlltefyqaveehggiekymhsniswlkielellsacyqiailedmkVldisemlslndlrifpktpSqlQNtyYklkkeliqvedipknkPgRkrk >3fdq_AB: title=RECOGNITION OF AT-RICH DNA BINDING SITES BY THE MOGR REPRESSOR organism=Listeria monocytogenes DNA sequence DT(C2):DA(D15) DT(C3):DA(D14) DT(C4):DA(D13) DT(C5):DA(D12) DT(C6):DA(D11) DT(C7):DA(D10) DA(C8):DT(D9) DA(C9):DT(D8) DA(C10):DT(D7) DA(C11):DT(D6) DA(C12):DT(D5) DA(C13):DT(D4) DA(C14):DT(D3) DT(C15):DA(D2) chainA ( 91) VAL94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (111) SER114 0 0 0 0 0 0 0 0 0 5 1 0 0 0 (114) GLN117 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (115) ASN118 0 0 0 0 0 0 0 0 3 7 1 0 0 0 (118) TYR121 0 0 0 0 0 0 0 0 0 0 0 5 10 0 (135) PRO138 0 0 0 0 2 6 2 0 0 0 0 0 0 0 (137) ARG140 0 3 5 11 4 0 0 0 0 0 0 0 0 0 chainB ( 91) VAL94 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) SER114 0 0 1 5 0 0 0 0 0 0 0 0 0 0 (114) GLN117 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ASN118 0 0 1 7 3 0 0 0 0 0 0 0 0 0 (118) TYR121 10 5 0 0 0 0 0 0 0 0 0 0 0 0 (135) PRO138 0 0 0 0 0 0 2 5 2 0 0 0 0 0 (137) ARG140 0 0 0 0 0 0 0 0 4 11 5 3 0 0 prot.sequence seirkllqeikkqvdnpgnsstteikkmaseagideqtaeeiyhlltefyqaveehggiekymhsniswlkielellsacyqiailedmkVldisemlslndlrifpktpSqlQNtyYklkkeliqvedipknkPgRkrk/seirkllqeikkqvdnpgnsstteikkmaseagideqtaeeiyhlltefyqaveehggiekymhsniswlkielellsacyqiailedmkVldisemlslndlrifpktpSqlQNtyYklkkeliqvedipknkPgRkrk >3fhz_A:C-terminal_domain_of_arginine_repressor;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ARGININE REPRESSOR FROM MYCOBACTERIUM TUBERCULOSIS BOUND WITH ITS DNA OPERATOR AND CO-REPRESSOR, L- ARGININE organism=? DNA sequence DT(K1):DA(L20) DG(K2):DC(L19) DT(K3):DA(L18) DT(K4):DA(L17) DG(K5):DC(L16) DC(K6):DG(L15) DA(K7):DT(L14) DT(K8):DA(L13) DA(K9):DT(L12) DA(K10):DT(L11) DC(K11):DG(L10) DG(K12):DC(L9) DA(K13):DT(L8) DT(K14):DA(L7) DG(K15):DC(L6) DC(K16):DG(L5) DA(K17):DT(L4) DA(K18):DT(L3) DA(K19):DT(L2) DA(K20):DT(L1) chainA ( 22) GLN37 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 37) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 38) GLN53 0 0 0 0 0 0 0 0 0 0 0 6 9 1 0 0 0 0 0 0 ( 39) ALA54 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 ( 40) THR55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 42) SER57 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 43) ARG58 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 12 15 0 0 0 prot.sequence anragrqarivailssaqvrsQnelaallaaegievTQATlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr >3fhz_AD: title=CRYSTAL STRUCTURE OF THE ARGININE REPRESSOR FROM MYCOBACTERIUM TUBERCULOSIS BOUND WITH ITS DNA OPERATOR AND CO-REPRESSOR, L- ARGININE organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DT(K1):DA(L20) DG(K2):DC(L19) DT(K3):DA(L18) DT(K4):DA(L17) DG(K5):DC(L16) DC(K6):DG(L15) DA(K7):DT(L14) DT(K8):DA(L13) DA(K9):DT(L12) DA(K10):DT(L11) DC(K11):DG(L10) DG(K12):DC(L9) DA(K13):DT(L8) DT(K14):DA(L7) DG(K15):DC(L6) DC(K16):DG(L5) DA(K17):DT(L4) DA(K18):DT(L3) DA(K19):DT(L2) DA(K20):DT(L1) chainA ( 22) GLN37 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 37) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 38) GLN53 0 0 0 0 0 0 0 0 0 0 0 6 9 1 0 0 0 0 0 0 ( 39) ALA54 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 ( 40) THR55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 42) SER57 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 43) ARG58 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 12 15 0 0 0 chainD ( 48) THR52 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLN53 0 0 0 0 0 0 0 10 14 0 0 0 0 0 0 0 0 0 0 0 ( 50) ALA54 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) THR55 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) SER57 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG58 0 0 0 7 11 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence anragrqarivailssaqvrsQnelaallaaegievTQATlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr/kaapvagpevaanragrqarivailssaqvrsqnelaallaaegievTQATlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr >3fhz_BF: title=CRYSTAL STRUCTURE OF THE ARGININE REPRESSOR FROM MYCOBACTERIUM TUBERCULOSIS BOUND WITH ITS DNA OPERATOR AND CO-REPRESSOR, L- ARGININE organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DT(J1):DA(I20) DT(J2):DA(I19) DT(J3):DA(I18) DT(J4):DA(I17) DG(J5):DC(I16) DC(J6):DG(I15) DA(J7):DT(I14) DT(J8):DA(I13) DC(J9):DG(I12) DG(J10):DC(I11) DT(J11):DA(I10) DT(J12):DA(I9) DA(J13):DT(I8) DT(J14):DA(I7) DG(J15):DC(I6) DC(J16):DG(I5) DA(J17):DT(I4) DA(J18):DT(I3) DC(J19):DG(I2) DA(J20):DT(I1) chainB ( 43) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 44) GLN53 0 0 0 0 0 0 0 0 0 0 0 10 10 1 0 0 0 0 0 0 ( 45) ALA54 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 2 0 0 0 0 ( 46) THR55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 48) SER57 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 49) ARG58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 10 0 0 0 chainF ( 22) GLN37 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN53 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 ( 39) ALA54 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR55 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER57 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG58 0 0 0 8 13 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence agpevaanragrqarivailssaqvrsqnelaallaaegievTQATlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr/anragrqarivailssaqvrsQnelaallaaegievtQATlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr >3fhz_CE: title=CRYSTAL STRUCTURE OF THE ARGININE REPRESSOR FROM MYCOBACTERIUM TUBERCULOSIS BOUND WITH ITS DNA OPERATOR AND CO-REPRESSOR, L- ARGININE organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DT(H1):DA(G20) DT(H2):DA(G19) DT(H3):DA(G18) DT(H4):DA(G17) DG(H5):DC(G16) DC(H6):DG(G15) DA(H7):DT(G14) DT(H8):DA(G13) DC(H9):DG(G12) DG(H10):DC(G11) DT(H11):DA(G10) DT(H12):DA(G9) DA(H13):DT(G8) DT(H14):DA(G7) DG(H15):DC(G6) DC(H16):DG(G5) DA(H17):DT(G4) DA(H18):DT(G3) DC(H19):DG(G2) DA(H20):DT(G1) DT(K1):DA(L20) DG(K2):DC(L19) DT(K3):DA(L18) DT(K4):DA(L17) DG(K5):DC(L16) DC(K6):DG(L15) DA(K7):DT(L14) DT(K8):DA(L13) DA(K9):DT(L12) DA(K10):DT(L11) DC(K11):DG(L10) DG(K12):DC(L9) DA(K13):DT(L8) DT(K14):DA(L7) DG(K15):DC(L6) DC(K16):DG(L5) DA(K17):DT(L4) DA(K18):DT(L3) DA(K19):DT(L2) DA(K20):DT(L1) chainC ( 42) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN53 0 0 0 0 0 0 0 0 0 0 0 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA54 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) SER57 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG58 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 22) GLN37 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR52 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN53 0 0 0 0 0 0 1 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ALA54 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR55 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER57 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG58 0 0 0 12 15 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gpevaanragrqarivailssaqvrsqnelaallaaegievTQATlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr/anragrqarivailssaqvrsQnelaallaaegievTQATlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr >3fmt_AB:Replication_modulator_SeqA,_C-terminal_DNA-binding_domain;Ribbon-helix-helix; title=CRYSTAL STRUCTURE OF SEQA BOUND TO DNA organism=ESCHERICHIA COLI DNA sequence DG(C3):DC(D22) DT(C4):DA(D21) DC(C5):DG(D20) DG(C6):DC(D19) 6MA(C7):DT(D18) DT(C8):DA(D17) DC(C9):DG(D16) DG(C10):DC(D15) DG(C11):DC(D14) DC(C12):DG(D13) DG(C13):DC(D12) DG(C14):DC(D11) DG(C15):DC(D10) 6MA(C16):DT(D9) DT(C17):DA(D8) DC(C18):DG(D7) DC(C19):DG(D6) DT(C20):DA(D5) DT(C21):DA(D4) DA(C22):DT(D3) chainA ( 97) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 3 0 ( 99) ARG118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (115) GLN134 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (117) LYS136 0 0 0 0 0 0 0 0 0 0 4 7 4 0 0 0 0 0 0 0 (131) ASN150 0 0 0 0 0 0 0 0 0 0 0 0 4 10 8 0 0 0 0 0 (133) ASN152 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 (136) ARG155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainB ( 94) ARG118 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) GLN134 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) ASN150 0 0 0 5 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ASN152 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG155 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mktievddelysyiashtkhigesrsdilrrmlkfsaasqkpvktikdkvramrelllsdeyaeqkravnrfmlllstlysldaqafaeateslhgRtRvyfaadeqtllkngnQtKpkhvpgtpywvitNtNtgRkcsmiehimqsmqfpaeliekvcgti/mktievddelysyiashtkhigesrsdilrrmlkfkpvktikdkvramrelllsdeyaeqkravnrfmlllstlysldaqafaeateslhgrtRvyfaadeqtllkngnQtkpkhvpgtpywvitNtNtgRkcsmiehimqsmqfpaeliekvcgti >3fmt_B:Replication_modulator_SeqA,_C-terminal_DNA-binding_domain;Ribbon-helix-helix; title=CRYSTAL STRUCTURE OF SEQA BOUND TO DNA organism=ESCHERICHIA COLI DNA sequence DG(C3):DC(D22) DT(C4):DA(D21) DC(C5):DG(D20) DG(C6):DC(D19) 6MA(C7):DT(D18) DT(C8):DA(D17) DC(C9):DG(D16) DG(C10):DC(D15) DG(C11):DC(D14) DC(C12):DG(D13) DG(C13):DC(D12) DG(C14):DC(D11) DG(C15):DC(D10) 6MA(C16):DT(D9) DT(C17):DA(D8) DC(C18):DG(D7) DC(C19):DG(D6) DT(C20):DA(D5) DT(C21):DA(D4) DA(C22):DT(D3) chainB ( 94) ARG118 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) GLN134 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) ASN150 0 0 0 5 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ASN152 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG155 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mktievddelysyiashtkhigesrsdilrrmlkfkpvktikdkvramrelllsdeyaeqkravnrfmlllstlysldaqafaeateslhgrtRvyfaadeqtllkngnQtkpkhvpgtpywvitNtNtgRkcsmiehimqsmqfpaeliekvcgti >3fmt_EF:Replication_modulator_SeqA,_C-terminal_DNA-binding_domain;Ribbon-helix-helix; title=CRYSTAL STRUCTURE OF SEQA BOUND TO DNA organism=ESCHERICHIA COLI DNA sequence DG(G3):DC(H22) DT(G4):DA(H21) DC(G5):DG(H20) DG(G6):DC(H19) 6MA(G7):DT(H18) DT(G8):DA(H17) DC(G9):DG(H16) DG(G10):DC(H15) DG(G11):DC(H14) DC(G12):DG(H13) DG(G13):DC(H12) DG(G14):DC(H11) DG(G15):DC(H10) 6MA(G16):DT(H9) DT(G17):DA(H8) DC(G18):DG(H7) DC(G19):DG(H6) DT(G20):DA(H5) DT(G21):DA(H4) DA(G22):DT(H3) chainE ( 97) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 3 0 ( 99) ARG118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (115) GLN134 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (117) LYS136 0 0 0 0 0 0 0 0 0 0 4 7 4 0 0 0 0 0 0 0 (131) ASN150 0 0 0 0 0 0 0 0 0 0 0 0 4 10 8 0 0 0 0 0 (133) ASN152 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 (136) ARG155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainF ( 94) ARG118 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) GLN134 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) ASN150 0 0 0 5 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ASN152 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG155 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mktievddelysyiashtkhigesrsdilrrmlkfsaasqkpvktikdkvramrelllsdeyaeqkravnrfmlllstlysldaqafaeateslhgRtRvyfaadeqtllkngnQtKpkhvpgtpywvitNtNtgRkcsmiehimqsmqfpaeliekvcgti/mktievddelysyiashtkhigesrsdilrrmlkfkpvktikdkvramrelllsdeyaeqkravnrfmlllstlysldaqafaeateslhgrtRvyfaadeqtllkngnQtkpkhvpgtpywvitNtNtgRkcsmiehimqsmqfpaeliekvcgti >3fof_ABCD:Type_II_DNA_topoisomerase; title=STRUCTURAL INSIGHT INTO THE QUINOLONE-DNA CLEAVAGE COMPLEX OF TYPE IIA TOPOISOMERASES organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(G1):DG(H19) DT(G2):DA(H18) DG(G3):DC(H17) DT(G4):DA(H16) DT(G5):DA(H15) DT(G6):DA(H14) DT(G7):DA(H13) DA(G8):DT(H12) DC(G9):DG(H11) DG(G10):DC(H10) DT(G11):DA(H9) DG(G12):DC(H8) DC(G13):DG(H7) DA(G14):DT(H6) DT(G15):DA(H5) DA(F1):DT(H4) DG(F2):DC(H3) DT(F3):DA(H2) DC(F4):DG(H1) DA(F5):DT(E15) DT(F6):DA(E14) DT(F7):DA(E13) DC(F8):DG(E12) DA(F9):DT(E11) DT(F10):DA(E10) DG(F11):DC(E9) DA(F12):DT(E8) DC(F13):DG(E7) DC(F14):DG(E6) DT(F15):DA(E5) DT(F16):DA(E4) DG(F17):DC(E3) DG(F18):DC(E2) DT(F19):DA(E1) chainA chainB chainC ( 37) LYS458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence qnmsledimgerfgryskyiiqdralpdirdglkpvqrrilysmnkdsndksyrksaksvgnimgnfhphgdssiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvntdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetggrvvvrskteieklkggkeqiviteinkanlvkkiddvrvnnkvieltelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprl/qnmsledimgerfgryskyiiqdralpdirdglkpvqrrilysmnkdsndksyrksaksvgnimgnfhphgdssiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvntdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrseieklkggkeqiviteinkanlvkkiddvrvnnkielntelvlnylfkytdlqinfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprl/tpaqsnpaknelylvegdsaggsakqdrkfilplrgKvintakakmadilkneeintmiytigagvgkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskgkgkkeevaawtdgeleelkgatlqrykglgemdqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiedn/tpaqsnpaknelylvegdsaggsakqgrdrkfilplRvintakakmadilkneeintmiytigagvgkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskgkgkkeevayawtdgeleelkgatlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiedn >3fsi_A:DNA/RNA_polymerases; title=CRYSTAL STRUCTURE OF A TRYPANOCIDAL 4,4'- BIS(IMIDAZOLINYLAMINO)DIPHENYLAMINE BOUND TO DNA organism=Moloney murine leukemia virus DNA sequence DC(G1):DG(B16) DT(G2):DA(B15) DT(G3):DA(B14) DA(G4):DT(B13) DA(G5):DT(B12) DT(G6):DA(B11) DT(G7):DA(B10) DC(G8):DG(B9) chainA ( 76) LEU99 23 0 0 0 0 0 0 0 ( 77) PRO100 1 0 0 0 0 0 0 0 ( 78) VAL101 3 0 0 0 0 0 0 0 ( 84) ASP114 13 0 0 0 0 0 0 0 ( 86) ARG116 7 7 4 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiqrlldqgilvpcqspwntplLPVyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >3fyl_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:CGT COMPLEX organism=Rattus norvegicus DNA sequence DC(D2):DG(C16) DG(D3):DC(C15) DG(D4):DC(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DA(D8):DT(C10) DA(D9):DT(C9) DA(D10):DT(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) chainA ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 2 7 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 2 5 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 14 12 1 0 0 chainB ( 15) HIS451 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS461 3 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 1 4 2 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 0 1 13 17 0 0 0 0 0 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear/shmclvcsdeasgcHygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearkt >3fyl_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:CGT COMPLEX organism=Rattus norvegicus DNA sequence DC(D2):DG(C16) DG(D3):DC(C15) DG(D4):DC(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DA(D8):DT(C10) DA(D9):DT(C9) DA(D10):DT(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) chainB ( 15) HIS451 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS461 3 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 1 4 2 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 0 1 13 17 0 0 0 0 0 0 0 0 prot.sequence shmclvcsdeasgcHygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearkt >3g00_AB:DNase_I-like; title=MTH0212 IN COMPLEX WITH A 9BP BLUNT END DSDNA AT 1.7 ANGSTROM organism=METHANOTHERMOBACTER THERMAUTOTROPHICUS DNA sequence DC(H1):DG(I9) DG(H2):DC(I8) DT(H3):DA(I7) DA(H4):DT(I6) DT(H5):DU(I5) DT(H6):DA(I4) DA(H7):DT(I3) DC(H8):DG(I2) DG(H9):DC(I1) chainA ( 39) LYS40 0 1 3 0 0 0 0 0 0 (207) TYR208 4 0 0 0 0 0 0 0 0 (208) ARG209 39 0 0 0 0 0 0 0 0 chainB ( 38) LYS40 0 0 0 0 0 0 3 1 0 (206) TYR208 0 0 0 0 0 0 0 0 5 (207) ARG209 0 0 0 0 0 0 0 0 39 prot.sequence avlkiiswnvNglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkmseerlkyklefydafledvnrerdsgrnviicgnfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwSYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsDhcpigleiell/vlkiiswnvNglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkmseerlkyklefydafledvnrerdsgrnviicgnfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwSYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsDhcpigleiel >3g00_B:DNase_I-like; title=MTH0212 IN COMPLEX WITH A 9BP BLUNT END DSDNA AT 1.7 ANGSTROM organism=METHANOTHERMOBACTER THERMAUTOTROPHICUS DNA sequence DC(H1):DG(I9) DG(H2):DC(I8) DT(H3):DA(I7) DA(H4):DT(I6) DT(H5):DU(I5) DT(H6):DA(I4) DA(H7):DT(I3) DC(H8):DG(I2) DG(H9):DC(I1) chainB ( 38) LYS40 0 0 0 0 0 0 3 1 0 (206) TYR208 0 0 0 0 0 0 0 0 5 (207) ARG209 0 0 0 0 0 0 0 0 39 prot.sequence vlkiiswnvNglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkmseerlkyklefydafledvnrerdsgrnviicgnfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwSYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsDhcpigleiel >3g0q_A:Nudix;DNA-glycosylase; title=CRYSTAL STRUCTURE OF MUTY BOUND TO ITS INHIBITOR DNA organism=Bacillus Stearothermophilus DNA sequence DG(C13):DC(B11) DT(C14):DA(B10) DC(C15):DG(B9) DC(C16):DG(B8) DC(C17):DG(B7) A5L(C18):8OG(B6) DG(C19):DC(B5) DT(C20):DA(B4) DC(C21):DG(B3) DT(C22):DA(B2) chainA ( 18) ARG26 0 0 0 0 0 2 0 0 0 0 ( 20) LEU28 0 0 0 0 0 1 0 0 0 0 ( 22) TRP30 0 0 0 0 0 5 0 0 0 0 ( 23) ARG31 0 0 0 0 0 7 0 0 0 0 ( 35) GLU43 0 0 0 0 0 12 0 0 0 0 ( 38) LEU46 0 0 0 0 0 12 0 0 0 0 ( 40) GLN48 0 0 0 0 16 4 23 0 0 0 ( 41) THR49 0 0 0 0 0 5 0 0 0 0 ( 42) ARG50 0 0 6 11 12 0 0 0 0 0 ( 43) VAL51 0 0 0 0 0 2 0 0 0 0 ( 80) TYR88 0 0 0 0 0 34 36 0 0 0 ( 83) ARG91 0 0 0 0 0 2 0 0 0 0 (118) TYR126 0 0 0 0 0 9 0 0 0 0 (136) ASP144 0 0 0 0 0 1 0 0 0 0 (138) ASN146 0 0 0 0 0 1 0 0 0 0 (156) CYS164 0 0 0 0 0 0 0 0 0 2 (180) GLU188 0 0 0 0 0 7 0 0 0 0 (183) ILE191 0 0 0 0 0 6 0 0 0 0 (184) GLU192 0 0 0 0 0 2 0 0 0 0 (291) PHE307 0 0 0 0 0 3 0 0 0 0 (292) SER308 0 0 0 0 2 9 1 0 0 0 (293) HIS309 0 0 0 0 0 0 4 0 0 0 prot.sequence parefqrdlldwfarerrdlpwrkdrdpykvwvsevmlqQtRvetvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavdgnvmrvlsrlflvtddiakCstrkrfeqivreimayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmvkqvplavavladdegrvlirkrdstgllanlwefpscetdgadgkekleqmvglqveltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >3g0r_AB:DNase_I-like; title=COMPLEX OF MTH0212 AND AN 8BP DSDNA WITH DISTORTED ENDS organism=METHANOTHERMOBACTER THERMAUTOTROPHICUS DNA sequence DG(G1):DC(K11) DC(G2):DG(K10) DT(G3):DA(K9) DG(G4):DC(K8) DC(G5):DG(K7) DG(G6):DU(K6) DC(G7):DG(K5) DA(G8):DT(K4) DG(G9):DC(K3) chainA ( 38) LYS40 0 0 0 0 0 0 6 0 0 (115) MET117 0 0 0 0 0 0 0 4 1 (206) TYR208 0 0 0 0 0 0 0 0 6 chainB ( 38) LYS40 0 0 0 5 0 0 0 0 0 (112) ASN114 5 0 0 0 0 0 0 0 0 (114) LYS116 15 0 0 0 0 0 0 0 0 (115) MET117 0 0 1 0 0 0 0 0 0 (203) TRP205 3 0 0 0 0 0 0 0 0 (205) SER207 1 0 0 0 0 0 0 0 0 (206) TYR208 0 5 0 0 0 0 0 0 0 (207) ARG209 15 0 0 0 0 0 0 0 0 prot.sequence vlkiiswnvNglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkMseerlkyklefydafledvnrerdsgrnviicgnfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwsYrtrarernvgwrldyffvneefkgkvkrswilsdvmgsDhcpigleiel/vlkiiswnvNglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpNgKMseerlkyklefydafledvnrerdsgrnviicgnfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytWwSYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsDhcpigleie >3g0r_B:DNase_I-like; title=COMPLEX OF MTH0212 AND AN 8BP DSDNA WITH DISTORTED ENDS organism=METHANOTHERMOBACTER THERMAUTOTROPHICUS DNA sequence DC(K3):DG(G9) DT(K4):DA(G8) DG(K5):DC(G7) DU(K6):DG(G6) DG(K7):DC(G5) DC(K8):DG(G4) DA(K9):DT(G3) DG(K10):DC(G2) DC(K11):DG(G1) chainB ( 38) LYS40 0 0 0 0 0 5 0 0 0 (112) ASN114 0 0 0 0 0 0 0 0 5 (114) LYS116 0 0 0 0 0 0 0 0 15 (115) MET117 0 0 0 0 0 0 1 0 0 (203) TRP205 0 0 0 0 0 0 0 0 3 (205) SER207 0 0 0 0 0 0 0 0 1 (206) TYR208 0 0 0 0 0 0 0 5 0 (207) ARG209 0 0 0 0 0 0 0 0 15 prot.sequence vlkiiswnvNglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpNgKMseerlkyklefydafledvnrerdsgrnviicgnfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytWwSYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsDhcpigleie >3g2d_B:DNase_I-like; title=COMPLEX OF MTH0212 AND A 4 BP DSDNA WITH 3'-OVERHANG organism=METHANOTHERMOBACTER THERMAUTOTROPHICUS DNA sequence DC(H4):DG(I4) DA(H5):DT(I3) DG(H6):DC(I2) DG(H7):DC(I1) chainB ( 39) LYS40 0 1 1 0 (207) TYR208 0 0 0 5 (208) ARG209 0 0 0 33 prot.sequence avlkiiswnvNglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkmseerlkyklefydafledvnrerdsgrnviicgnfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwsYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsDhcpigleie >3g38_A:DNase_I-like; title=THE CATALYTICALLY INACTIVE MUTANT MTH0212 (D151N) IN COMPLEX WITH AN 8 BP DSDNA organism=METHANOTHERMOBACTER THERMAUTOTROPHICUS DNA sequence DC(G1):DG(K8) DC(G2):DG(K7) DT(G3):DA(K6) DG(G4):DC(K5) DU(G5):DG(K4) DG(G6):DG(K2) DG(G8):DC(K1) chainA ( 39) LYS40 0 0 0 0 0 2 0 (116) MET117 0 0 0 0 0 0 7 (207) TYR208 0 0 0 0 0 0 6 (208) ARG209 0 0 0 0 0 0 14 prot.sequence avlkiiswnvNglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkMseerlkyklefydafledvnrerdsgrnviicgnfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwsYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsdhcpigleiell >3g3c_A:DNase_I-like; title=MTH0212 (WT) IN COMPLEX WITH A 6BP DSDNA CONTAINING A SINGLE ONE NUCLEOTIDE LONG 3'-OVERHANG organism=METHANOTHERMOBACTER THERMAUTOTROPHICUS DNA sequence DT(I3):DA(H7) DA(I4):DT(H6) UPS(I5):DC(H5) DT(I6):DA(H4) DA(I7):DT(H3) DC(I8):DG(H2) DG(I9):DC(H1) chainA ( 39) LYS40 0 0 0 0 4 1 0 (207) TYR208 0 0 0 0 0 0 1 (208) ARG209 0 0 0 0 0 0 20 prot.sequence avlkiiswnvnglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkmseerlkyklefydafledvnrerdsgrnviicgdfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwsYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsdhcpigleie >3g3c_AB:DNase_I-like; title=MTH0212 (WT) IN COMPLEX WITH A 6BP DSDNA CONTAINING A SINGLE ONE NUCLEOTIDE LONG 3'-OVERHANG organism=METHANOTHERMOBACTER THERMAUTOTROPHICUS DNA sequence DT(I3):DA(H7) DA(I4):DT(H6) UPS(I5):DC(H5) DT(I6):DA(H4) DA(I7):DT(H3) DC(I8):DG(H2) DG(I9):DC(H1) chainA ( 39) LYS40 0 0 0 0 4 1 0 (207) TYR208 0 0 0 0 0 0 1 (208) ARG209 0 0 0 0 0 0 20 chainB (207) TYR208 1 0 0 0 0 0 0 (208) ARG209 20 0 0 0 0 0 0 prot.sequence avlkiiswnvnglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkmseerlkyklefydafledvnrerdsgrnviicgdfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwsYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsdhcpigleie/avlkiiswnvnglravhrkgflkwfmeekpdilclqeikaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkmseerlkyklefydafledvnrerdsgrnviicgdfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwsYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsdhcpigleiell >3g4t_A:DNase_I-like; title=MTH0212 (WT) IN COMPLEX WITH A 7BP DSDNA organism=METHANOTHERMOBACTER THERMAUTOTROPHICUS DNA sequence DT(I3):DA(H7) DA(I4):DT(H6) DC(I5):UPS(H5) DT(I6):DA(H4) DA(I7):DT(H3) DC(I8):DG(H2) DG(I9):DC(H1) chainA ( 38) LYS40 0 0 3 0 0 0 0 (206) TYR208 4 0 0 0 0 0 0 (207) ARG209 29 0 0 0 0 0 0 prot.sequence vlkiiswnvnglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkmseerlkyklefydafledvnrerdsgrnviicgdfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwsYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsdhcpigleie >3g4t_AB:DNase_I-like; title=MTH0212 (WT) IN COMPLEX WITH A 7BP DSDNA organism=METHANOTHERMOBACTER THERMAUTOTROPHICUS DNA sequence DC(H1):DG(I9) DG(H2):DC(I8) DT(H3):DA(I7) DA(H4):DT(I6) UPS(H5):DC(I5) DT(H6):DA(I4) DA(H7):DT(I3) chainA ( 38) LYS40 0 0 0 0 3 0 0 (206) TYR208 0 0 0 0 0 0 4 (207) ARG209 0 0 0 0 0 0 29 chainB ( 40) LYS40 0 1 1 0 0 0 0 (208) TYR208 3 0 0 0 0 0 0 (209) ARG209 26 0 0 0 0 0 0 prot.sequence vlkiiswnvnglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkmseerlkyklefydafledvnrerdsgrnviicgdfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwsYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsdhcpigleie/mavlkiiswnvnglravhrkgflkwfmeekpdilclqeiKaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkmseerlkyklefydafledvnrerdsgrnviicgdfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwsYRtrarernvgwrldyffvneefkgkvkrswilsdvmgsdhcpiglei >3g6p_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:FKBP5 COMPLEX, 18BP organism=Rattus norvegicus DNA sequence DC(D2):DG(C18) DA(D3):DT(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DC(D7):DG(C13) DA(D8):DT(C12) DG(D9):DC(C11) DG(D10):DC(C10) DG(D11):DC(C9) DT(D12):DA(C8) DG(D13):DC(C7) DT(D14):DA(C6) DT(D15):DA(C5) DC(D16):DG(C4) DT(D17):DA(C3) DG(D18):DC(C2) chainA ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 3 0 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 0 12 12 3 0 0 0 0 ( 74) ARG510 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleaR >3g6p_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:FKBP5 COMPLEX, 18BP organism=Rattus norvegicus DNA sequence DC(C2):DG(D18) DA(C3):DT(D17) DG(C4):DC(D16) DA(C5):DT(D15) DA(C6):DT(D14) DC(C7):DG(D13) DA(C8):DT(D12) DC(C9):DG(D11) DC(C10):DG(D10) DC(C11):DG(D9) DT(C12):DA(D8) DG(C13):DC(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DT(C17):DA(D3) DG(C18):DC(D2) chainA ( 25) LYS461 0 3 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 0 0 3 12 12 0 0 0 0 0 0 0 0 0 0 ( 74) ARG510 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 0 13 12 1 0 0 0 0 ( 74) ARG510 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleaR/shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleaRktkkkik >3g6q_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:FKBP5 BINDING SITE COMPLEX-9 organism=Rattus norvegicus DNA sequence DA(D2):DT(C16) DG(D3):DC(C15) DA(D4):DT(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DC(D8):DG(C10) DC(D9):DG(C9) DC(D10):DG(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) chainA ( 24) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 25) VAL462 0 0 0 0 0 0 0 0 0 0 2 5 0 0 ( 29) ARG466 0 0 0 0 0 0 0 0 0 16 13 2 0 0 prot.sequence hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkk >3g6q_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:FKBP5 BINDING SITE COMPLEX-9 organism=Rattus norvegicus DNA sequence DA(D2):DT(C16) DG(D3):DC(C15) DA(D4):DT(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DC(D8):DG(C10) DC(D9):DG(C9) DC(D10):DG(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) chainB ( 25) LYS461 5 8 1 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 0 4 2 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 0 2 12 15 0 0 0 0 0 0 0 0 chainA ( 24) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 25) VAL462 0 0 0 0 0 0 0 0 0 0 2 5 0 0 ( 29) ARG466 0 0 0 0 0 0 0 0 0 16 13 2 0 0 prot.sequence hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkk/shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear >3g6r_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:FKBP5 COMPLEX-52, 18BP organism=Rattus norvegicus DNA sequence DC(D2):DG(C18) DA(D3):DT(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DC(D7):DG(C13) DA(D8):DT(C12) DC(D9):DG(C11) DC(D10):DG(C10) DC(D11):DG(C9) DT(D12):DA(C8) DG(D13):DC(C7) DT(D14):DA(C6) DT(D15):DA(C5) DC(D16):DG(C4) DT(D17):DA(C3) DG(D18):DC(C2) chainA ( 25) LYS461 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 0 0 1 12 15 0 0 0 0 0 0 0 0 0 0 ( 74) ARG510 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleaRktkkk >3g6r_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:FKBP5 COMPLEX-52, 18BP organism=Rattus norvegicus DNA sequence DC(C2):DG(D18) DA(C3):DT(D17) DG(C4):DC(D16) DA(C5):DT(D15) DA(C6):DT(D14) DC(C7):DG(D13) DA(C8):DT(D12) DG(C9):DC(D11) DG(C10):DC(D10) DG(C11):DC(D9) DT(C12):DA(D8) DG(C13):DC(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DT(C17):DA(D3) DG(C18):DC(D2) chainB ( 25) LYS461 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 0 0 1 12 14 0 0 0 0 0 0 0 0 0 0 chainA ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 0 15 12 1 0 0 0 0 ( 74) ARG510 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleaRktkkk/shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear >3g6t_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR GAMMA DNA-BINDING DOMAIN:FKBP5 16BP COMPLEX-34 organism=Rattus norvegicus DNA sequence DA(D2):DT(C16) DG(D3):DC(C15) DA(D4):DT(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DC(D8):DG(C10) DC(D9):DG(C9) DC(D10):DG(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) chainA ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 13 12 4 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegrqhnylcagrndciidkirrkncpacryrkclqagmnlearktk >3g6t_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR GAMMA DNA-BINDING DOMAIN:FKBP5 16BP COMPLEX-34 organism=Rattus norvegicus DNA sequence DA(D2):DT(C16) DG(D3):DC(C15) DA(D4):DT(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DC(D8):DG(C10) DC(D9):DG(C9) DC(D10):DG(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) chainA ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 13 12 4 0 0 chainB ( 24) LYS461 4 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL462 0 0 0 5 3 0 0 0 0 0 0 0 0 0 ( 29) ARG466 0 0 0 2 13 15 0 0 0 0 0 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegrqhnylcagrndciidkirrkncpacryrkclqagmnlearktk/hmclvcsdeasgchygvltcgscKVffkRavegrqhnylcagrndciidkirrKncpacryrkclqagmnle >3g6u_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA-BINDING DOMAIN:FKBP5 16BP COMPLEX-49 organism=Rattus norvegicus DNA sequence DA(D2):DT(C16) DG(D3):DC(C15) DA(D4):DT(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DG(D8):DC(C10) DG(D9):DC(C9) DG(D10):DC(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) chainA ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 2 5 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 14 12 1 0 0 chainB ( 25) LYS461 5 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 0 4 2 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 0 1 12 14 0 0 0 0 0 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktk/shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearkt >3g6u_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA-BINDING DOMAIN:FKBP5 16BP COMPLEX-49 organism=Rattus norvegicus DNA sequence DA(D2):DT(C16) DG(D3):DC(C15) DA(D4):DT(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DG(D8):DC(C10) DG(D9):DC(C9) DG(D10):DC(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) chainB ( 25) LYS461 5 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 0 4 2 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 0 1 12 14 0 0 0 0 0 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearkt >3g6v_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA SYNTHESIS ACROSS AN ABASIC LESION BY HUMAN DNA POLYMERASE-IOTA organism=Homo sapiens DNA sequence DG(T841):DOC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainA ( 15) TYR39 1 0 0 0 0 0 0 (281) GLU305 3 3 0 0 0 0 0 (319) ARG343 0 0 0 0 0 1 2 prot.sequence assrvivhvdldcfYaqvemisnpelkdkplgvqQkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssekhygresrqcpipshviqvmtpmvdilmklfrnmtllsvcfcnlk >3g6x_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF DNA POLYMERASE IOTA:DNA:DGTP WITH AN ABASIC SITE AT THE TEMPLATING POSITION organism=Homo sapiens DNA sequence DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainA (277) SER301 0 0 1 0 0 0 (281) GLU305 3 0 0 0 0 0 (319) ARG343 0 0 0 0 1 0 (335) SER359 0 0 0 0 1 0 prot.sequence assrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqSfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssekhygreSrqcpipshviqvmtpmvdilmklfrnmtllsvcfcnlk >3g6y_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF DNA POLYMERASE IOTA:DNA:DTTP WITH AN ABASIC SITE AT THE TEMPLATING POSITION organism=Homo sapiens DNA sequence DG(T841):DOC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainA ( 15) TYR39 1 0 0 0 0 0 0 (277) SER301 0 0 0 1 0 0 0 (281) GLU305 3 2 0 0 0 0 0 (337) GLN361 0 0 0 0 0 0 1 prot.sequence assrvivhvdldcfYaqvemisnpelkdkplgvqQkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqSfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirryssekhygresrQcpipshviqvmtpmvdilmklfrnmtllsvcfcnlk >3g73_A:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE FOXM1 DNA BINDING organism=Homo sapiens DNA sequence DC(D3):DG(C21) DG(D4):DC(C20) DG(D5):DC(C19) DG(D6):DC(C18) DC(D7):DG(C17) DT(D8):DA(C16) DG(D9):DC(C15) DT(D10):DA(C14) DT(D11):DA(C13) DT(D12):DA(C12) DA(D13):DT(C11) DT(D14):DA(C10) DA(D15):DT(C9) DA(D16):DT(C8) DA(D17):DT(C7) DC(D18):DG(C6) DA(D19):DT(C5) DA(D20):DT(C4) DT(D21):DA(C3) chainA ( 52) ASN283 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 ( 53) SER284 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 55) ARG286 0 0 0 0 0 10 9 1 0 0 0 0 0 0 0 0 0 0 0 ( 56) HIS287 0 0 0 0 0 0 0 0 7 9 12 0 0 0 0 0 0 0 0 ( 59) SER290 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 prot.sequence svserppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwkNSiRHnlSlhdmfvretsangkvsfwtihpsanryltld >3g73_AB:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE FOXM1 DNA BINDING organism=Homo sapiens DNA sequence DA(C3):DT(D21) DT(C4):DA(D20) DT(C5):DA(D19) DG(C6):DC(D18) DT(C7):DA(D17) DT(C8):DA(D16) DT(C9):DA(D15) DA(C10):DT(D14) DT(C11):DA(D13) DA(C12):DT(D12) DA(C13):DT(D11) DA(C14):DT(D10) DC(C15):DG(D9) DA(C16):DT(D8) DG(C17):DC(D7) DC(C18):DG(D6) DC(C19):DG(D5) DC(C20):DG(D4) DG(C21):DC(D3) chainA ( 52) ASN283 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 ( 53) SER284 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 55) ARG286 0 0 0 0 0 0 0 0 0 0 0 1 9 10 0 0 0 0 0 ( 56) HIS287 0 0 0 0 0 0 0 0 12 9 7 0 0 0 0 0 0 0 0 ( 59) SER290 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 chainB ( 51) SER284 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG286 0 0 9 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) HIS287 0 0 0 0 0 8 11 11 0 0 0 0 0 0 0 0 0 0 0 ( 57) SER290 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) LEU291 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence svserppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwkNSiRHnlSlhdmfvretsangkvsfwtihpsanryltld/serppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwknSiRHnlSLhdmfvretsangkvsfwtihpsanryltldqvfkpld >3g8u_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=DNA BINDING DOMAIN:GILZ 16BP COMPLEX-5 organism=Rattus norvegicus DNA sequence DG(C3):DC(D15) DA(C4):DT(D14) DA(C5):DT(D13) DC(C6):DG(D12) DA(C7):DT(D11) DT(C8):DA(D10) DT(C9):DA(D9) DG(C10):DC(D8) DG(C11):DC(D7) DG(C12):DC(D6) DT(C13):DA(D5) DT(C14):DA(D4) DC(C15):DG(D3) DC(C16):DG(D2) chainA ( 25) LYS461 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 4 2 0 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 1 10 12 0 0 0 0 0 0 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkk >3g8u_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=DNA BINDING DOMAIN:GILZ 16BP COMPLEX-5 organism=Rattus norvegicus DNA sequence DG(D2):DC(C16) DG(D3):DC(C15) DA(D4):DT(C14) DA(D5):DT(C13) DC(D6):DG(C12) DC(D7):DG(C11) DC(D8):DG(C10) DA(D9):DT(C9) DA(D10):DT(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) chainA ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 12 10 1 0 0 chainB ( 23) LYS461 2 8 1 0 0 0 0 0 0 0 0 0 0 0 ( 24) VAL462 0 0 0 3 2 0 0 0 0 0 0 0 0 0 ( 28) ARG466 0 0 0 1 10 17 0 0 0 0 0 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkk/mclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear >3g8x_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:GILZ 16BP COMPLEX-65 organism=Rattus norvegicus DNA sequence DG(C3):DC(D15) DA(C4):DT(D14) DA(C5):DT(D13) DC(C6):DG(D12) DA(C7):DT(D11) DT(C8):DA(D10) DT(C9):DA(D9) DG(C10):DC(D8) DG(C11):DC(D7) DG(C12):DC(D6) DT(C13):DA(D5) DT(C14):DA(D4) DC(C15):DG(D3) DC(C16):DG(D2) chainA ( 24) LYS461 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL462 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 29) ARG466 0 0 1 12 15 0 0 0 0 0 0 0 0 0 prot.sequence hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktk >3g8x_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:GILZ 16BP COMPLEX-65 organism=Rattus norvegicus DNA sequence DG(C3):DC(D15) DA(C4):DT(D14) DA(C5):DT(D13) DC(C6):DG(D12) DA(C7):DT(D11) DT(C8):DA(D10) DT(C9):DA(D9) DG(C10):DC(D8) DG(C11):DC(D7) DG(C12):DC(D6) DT(C13):DA(D5) DT(C14):DA(D4) DC(C15):DG(D3) DC(C16):DG(D2) chainA ( 24) LYS461 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL462 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 29) ARG466 0 0 1 12 15 0 0 0 0 0 0 0 0 0 chainB ( 13) HIS451 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 23) LYS461 0 0 0 0 0 0 0 0 0 0 0 2 9 0 ( 24) VAL462 0 0 0 0 0 0 0 0 0 2 3 0 0 0 ( 28) ARG466 0 0 0 0 0 0 0 0 12 12 1 0 0 0 prot.sequence hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktk/mclvcsdeasgcHygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktk >3g97_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA-BINDING DOMAIN:GILZ 16BP COMPLEX-9 organism=Rattus norvegicus DNA sequence DG(C3):DC(D15) DA(C4):DT(D14) DA(C5):DT(D13) DC(C6):DG(D12) DC(C7):DG(D11) DC(C8):DG(D10) DA(C9):DT(D9) DA(C10):DT(D8) DT(C11):DA(D7) DG(C12):DC(D6) DT(C13):DA(D5) DT(C14):DA(D4) DC(C15):DG(D3) DT(C16):DA(D2) chainA ( 24) LYS461 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL462 0 0 4 2 0 0 0 0 0 0 0 0 0 0 ( 29) ARG466 0 0 1 12 11 0 0 0 0 0 0 0 0 0 prot.sequence hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear >3g97_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA-BINDING DOMAIN:GILZ 16BP COMPLEX-9 organism=Rattus norvegicus DNA sequence DA(D2):DT(C16) DG(D3):DC(C15) DA(D4):DT(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DT(D8):DA(C10) DT(D9):DA(C9) DG(D10):DC(C8) DG(D11):DC(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) chainB ( 24) LYS461 0 8 1 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL462 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 29) ARG466 0 0 0 1 10 13 0 0 0 0 0 0 0 0 chainA ( 24) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 25) VAL462 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 29) ARG466 0 0 0 0 0 0 0 0 0 11 12 1 0 0 prot.sequence hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear/hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >3g99_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:PAL COMPLEX-9 organism=Rattus norvegicus DNA sequence DG(C3):DC(D15) DA(C4):DT(D14) DA(C5):DT(D13) DC(C6):DG(D12) DA(C7):DT(D11) DT(C8):DA(D10) DT(C9):DA(D9) DT(C10):DA(D8) DT(C11):DA(D7) DG(C12):DC(D6) DT(C13):DA(D5) DT(C14):DA(D4) DC(C15):DG(D3) DT(C16):DA(D2) chainA ( 25) LYS461 6 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 5 2 0 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 1 12 16 0 0 0 0 0 0 0 0 0 chainB ( 24) LYS461 0 0 0 0 0 0 0 0 0 0 0 1 7 5 ( 25) VAL462 0 0 0 0 0 0 0 0 0 1 5 0 0 0 ( 29) ARG466 0 0 0 0 0 0 0 0 16 13 1 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkk/hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear >3g99_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:PAL COMPLEX-9 organism=Rattus norvegicus DNA sequence DG(C3):DC(D15) DA(C4):DT(D14) DA(C5):DT(D13) DC(C6):DG(D12) DA(C7):DT(D11) DT(C8):DA(D10) DT(C9):DA(D9) DT(C10):DA(D8) DT(C11):DA(D7) DG(C12):DC(D6) DT(C13):DA(D5) DT(C14):DA(D4) DC(C15):DG(D3) DT(C16):DA(D2) chainB ( 24) LYS461 0 0 0 0 0 0 0 0 0 0 0 1 7 5 ( 25) VAL462 0 0 0 0 0 0 0 0 0 1 5 0 0 0 ( 29) ARG466 0 0 0 0 0 0 0 0 16 13 1 0 0 0 prot.sequence hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear >3g9i_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN: PAL COMPLEX-35 organism=Rattus norvegicus DNA sequence DG(D3):DC(C15) DA(D4):DT(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DA(D8):DT(C10) DA(D9):DT(C9) DA(D10):DT(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) DT(D16):DA(C2) chainA ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 5 3 ( 26) VAL462 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 17 12 1 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkk >3g9i_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN: PAL COMPLEX-35 organism=Rattus norvegicus DNA sequence DA(C2):DT(D16) DG(C3):DC(D15) DA(C4):DT(D14) DA(C5):DT(D13) DC(C6):DG(D12) DA(C7):DT(D11) DT(C8):DA(D10) DT(C9):DA(D9) DT(C10):DA(D8) DT(C11):DA(D7) DG(C12):DC(D6) DT(C13):DA(D5) DT(C14):DA(D4) DC(C15):DG(D3) chainA ( 25) LYS461 3 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 0 1 12 17 0 0 0 0 0 0 0 0 chainB ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 17 12 1 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkk/shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkkik >3g9j_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:PAL, 18BP COMPLEX-36 organism=Rattus norvegicus DNA sequence DC(D2):DG(C18) DA(D3):DT(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DC(D7):DG(C13) DA(D8):DT(C12) DT(D9):DA(C11) DT(D10):DA(C10) DT(D11):DA(C9) DT(D12):DA(C8) DG(D13):DC(C7) DT(D14):DA(C6) DT(D15):DA(C5) DC(D16):DG(C4) DT(D17):DA(C3) DG(D18):DC(C2) chainA ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 0 15 12 1 0 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear >3g9j_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:PAL, 18BP COMPLEX-36 organism=Rattus norvegicus DNA sequence DC(C2):DG(D18) DA(C3):DT(D17) DG(C4):DC(D16) DA(C5):DT(D15) DA(C6):DT(D14) DC(C7):DG(D13) DA(C8):DT(D12) DA(C9):DT(D11) DA(C10):DT(D10) DA(C11):DT(D9) DT(C12):DA(D8) DG(C13):DC(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DT(C17):DA(D3) DG(C18):DC(D2) chainA ( 25) LYS461 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 0 0 1 12 15 0 0 0 0 0 0 0 0 0 0 chainB ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 3 0 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 0 14 12 1 0 0 0 0 ( 74) ARG510 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear/shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleaRktkkk >3g9m_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA-BINDING DOMAIN:SGK 16BP COMPLEX-44 organism=Rattus norvegicus DNA sequence DG(C3):DC(D15) DA(C4):DT(D14) DA(C5):DT(D13) DC(C6):DG(D12) DA(C7):DT(D11) DT(C8):DA(D10) DT(C9):DA(D9) DT(C10):DA(D8) DT(C11):DA(D7) DG(C12):DC(D6) DT(C13):DA(D5) DC(C14):DG(D4) DC(C15):DG(D3) DG(C16):DC(D2) chainA ( 25) LYS461 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 1 12 15 0 0 0 0 0 0 0 0 0 chainB ( 14) HIS451 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 24) LYS461 0 0 0 0 0 0 0 0 0 0 0 1 8 1 ( 25) VAL462 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 29) ARG466 0 0 0 0 0 0 0 0 15 12 1 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkk/hmclvcsdeasgcHygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkk >3g9m_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA-BINDING DOMAIN:SGK 16BP COMPLEX-44 organism=Rattus norvegicus DNA sequence DC(D2):DG(C16) DG(D3):DC(C15) DG(D4):DC(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DA(D8):DT(C10) DA(D9):DT(C9) DA(D10):DT(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) chainB ( 14) HIS451 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS461 1 8 1 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL462 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 29) ARG466 0 0 0 1 12 15 0 0 0 0 0 0 0 0 prot.sequence hmclvcsdeasgcHygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkk >3g9o_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA-BINDING DOMAIN:SGK 16BP COMPLEX-9 organism=Rattus norvegicus DNA sequence DG(C3):DC(D15) DG(C4):DC(D14) DA(C5):DT(D13) DC(C6):DG(D12) DA(C7):DT(D11) DA(C8):DT(D10) DA(C9):DT(D9) DA(C10):DT(D8) DT(C11):DA(D7) DG(C12):DC(D6) DT(C13):DA(D5) DT(C14):DA(D4) DC(C15):DG(D3) DT(C16):DA(D2) chainB ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 1 7 1 ( 26) VAL462 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 16 12 1 0 0 0 chainA ( 25) LYS461 8 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 3 2 0 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 1 12 15 0 0 0 0 0 0 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark/shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark >3g9o_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA-BINDING DOMAIN:SGK 16BP COMPLEX-9 organism=Rattus norvegicus DNA sequence DA(D2):DT(C16) DG(D3):DC(C15) DA(D4):DT(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DT(D8):DA(C10) DT(D9):DA(C9) DT(D10):DA(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DC(D14):DG(C4) DC(D15):DG(C3) chainB ( 25) LYS461 1 7 1 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 0 1 12 16 0 0 0 0 0 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark >3g9p_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:SGK 16BP COMPLEX-7 organism=Rattus norvegicus DNA sequence DA(D2):DT(C16) DG(D3):DC(C15) DA(D4):DT(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DT(D8):DA(C10) DT(D9):DA(C9) DT(D10):DA(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DC(D14):DG(C4) DC(D15):DG(C3) chainB ( 25) LYS461 1 7 1 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL462 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 30) ARG466 0 0 0 1 12 16 0 0 0 0 0 0 0 0 chainA ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 1 8 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 2 3 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 15 12 1 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark/shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark >3g9p_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN:SGK 16BP COMPLEX-7 organism=Rattus norvegicus DNA sequence DG(C3):DC(D15) DG(C4):DC(D14) DA(C5):DT(D13) DC(C6):DG(D12) DA(C7):DT(D11) DA(C8):DT(D10) DA(C9):DT(D9) DA(C10):DT(D8) DT(C11):DA(D7) DG(C12):DC(D6) DT(C13):DA(D5) DT(C14):DA(D4) DC(C15):DG(D3) DT(C16):DA(D2) chainB ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 1 7 1 ( 26) VAL462 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 16 12 1 0 0 0 prot.sequence shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark >3ga6_A:DNase_I-like; title=MTH0212 IN COMPLEX WITH TWO DNA HELICES organism=METHANOTHERMOBACTER THERMAUTOTROPHICUS DNA sequence DG(F1):DC(D12) DC(F2):DG(D11) DT(F3):DA(D10) DG(F4):DC(D9) DC(F5):DG(D8) DG(F6):DU(D7) DC(F7):DG(D6) DA(F8):DT(D5) DG(F9):DC(D4) DG(F10):DC(D3) DG(F11):DC(D2) chainA (114) LYS1116 2 0 0 0 0 0 0 0 0 0 0 (205) SER1207 1 0 0 0 0 0 0 0 0 0 0 (207) ARG1209 42 0 0 0 0 0 0 0 0 0 0 (208) THR1210 1 5 0 0 0 0 0 0 0 0 0 prot.sequence vlkiiswnvnglravhrkgflkwfmeekpdilclqeikaapeqlprklrhvegyrsfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngKmseerlkyklefydafledvnrerdsgrnviicgnfntahreidlarpkensnvsgflpverawidkfiengyvdtfrmfnsdpgqytwwSyRTrarernvgwrldyffvneefkgkvkrswilsdvmgsdhcpigleie >3gat_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=SOLUTION NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF CHICKEN GATA-1 BOUND TO DNA, 34 STRUCTURES organism=GALLUS GALLUS DNA sequence DA(C117):DT(B116) DA(C118):DT(B115) DT(C119):DA(B114) DG(C120):DC(B113) DT(C121):DA(B112) DT(C122):DA(B111) DT(C123):DA(B110) DA(C124):DT(B109) DT(C125):DA(B108) DC(C126):DG(B107) DT(C127):DA(B106) DG(C128):DC(B105) DC(C129):DG(B104) DA(C130):DT(B103) DA(C131):DT(B102) DC(C132):DG(B101) chainA ( 16) THR16 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 ( 17) LEU17 0 0 0 0 0 0 0 0 0 8 14 0 0 0 0 0 ( 19) ARG19 0 0 0 0 0 0 0 0 4 14 0 0 0 0 0 0 ( 29) ASN29 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 33) LEU33 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 37) LEU37 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 57) LYS57 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 prot.sequence kragtvcsncqtsttTLwRrspmgdpvcNacgLyykLhqvnrpltmrkdgiqtrnrKvsskgkkrr >3gdx_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;DNA_polymerase_beta-like,_second_domain; title=DNA POLYMERASE BETA WITH A GAPPED DND SUBSTRATE AND DTMP(CF2)PP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 32 0 0 0 0 ( 26) LYS35 2 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3gii_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH DISORDERED A OPPOSITE AN OXOG IN ANTI CONFORMATION organism=Sulfolobus solfataricus P2 DNA sequence DC(E907):DG(D813) DT(E908):DA(D812) DA(E909):DT(D811) DC(E910):DG(D810) DC(E911):DG(D809) DA(E912):DT(D808) DT(E913):DA(D807) DC(E914):DG(D806) DC(E915):DG(D805) DA(E916):DT(D804) DA(E917):DT(D803) DC(E918):DG(D802) chainA (285) HIS285 0 0 0 0 0 2 0 0 0 0 0 0 (336) ARG336 0 7 0 0 0 0 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivSrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3gij_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH OXOG(SYN)-A(ANTI) AND OXOG(ANTI)- A(SYN) PAIRS organism=Sulfolobus solfataricus P2 DNA sequence DG(D802):DC(E918) DT(D803):DA(E917) DT(D804):DA(E916) DG(D805):DC(E915) DG(D806):DC(E914) DA(D807):DT(E913) DT(D808):DA(E912) DG(D809):DC(E911) DG(D810):DC(E910) DT(D811):DA(E909) DA(D812):DT(E908) DG(D813):DC(E907) chainA (285) HIS285 0 0 0 0 0 0 3 0 0 0 0 0 (336) ARG336 0 0 0 0 0 0 0 0 0 0 10 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivSrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3gik_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH THE OXOG(ANTI)-C(ANTI) PAIR organism=Sulfolobus solfataricus P2 DNA sequence DC(E907):DG(D12) DT(E908):DA(D11) DA(E909):DT(D10) DC(E910):DG(D9) DC(E911):DG(D8) DA(E912):DT(D7) DT(E913):DA(D6) DC(E914):DG(D5) DC(E915):DG(D4) DA(E916):DT(D3) DA(E917):DT(D2) DC(E918):DG(D1) chainA (285) HIS285 0 0 0 0 0 1 0 0 0 0 0 0 (336) ARG336 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3gil_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH OXOG(ANTI)-T(ANTI) PAIR organism=Sulfolobus solfataricus P2 DNA sequence DC(J1907):DG(H1813) DT(J1908):DA(H1812) DA(J1909):DT(H1811) DC(J1910):DG(H1810) DC(J1911):DG(H1809) DA(J1912):DT(H1808) DT(J1913):DA(H1807) DC(J1914):DG(H1806) DC(J1915):DG(H1805) DA(J1916):DT(H1804) DA(J1917):DT(H1803) DC(J1918):DG(H1802) chainB (285) HIS1285 0 0 0 0 0 3 0 0 0 0 0 0 (336) ARG1336 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3gim_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH OXOG(ANTI)-G(SYN) PAIR organism=Sulfolobus solfataricus P2 DNA sequence DC(E907):DG(D813) DT(E908):DA(D812) DA(E909):DT(D811) DC(E910):DG(D810) DC(E911):DG(D809) DA(E912):DT(D808) DT(E913):DA(D807) DC(E914):DG(D806) DC(E915):DG(D805) DA(E916):DT(D804) DA(E917):DT(D803) DC(E918):DG(D802) chainA (285) HIS285 0 0 0 0 0 1 0 0 0 0 0 0 (336) ARG336 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3glf_A:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_polymerase_III_clamp_loader_subunits,_C-terminal_domain; title=CRYSTAL STRUCTURE OF THE ECOLI CLAMP LOADER BOUND TO PRIMER-TEMPLATE DNA organism=ESCHERICHIA COLI DNA sequence DC(L1):DG(K15) DT(L2):DA(K14) DG(L3):DC(K13) DG(L4):DC(K12) DC(L5):DG(K11) DC(L6):DG(K10) DT(L7):DA(K9) DA(L8):DT(K8) DT(L9):DA(K7) DA(L10):DT(K6) chainA (316) TYR316 0 0 0 0 0 0 0 0 0 36 prot.sequence mirlypeqlraqlneglraaylllgndplllqesqdavrqvaaaqgfeehhtfsidpntdwnaifslcqamslfasrqtlllllpengpnaaineqlltltgllhddlllivrgnklskaqenaawftalanrsvqvtcqtpeqaqlprwvaarakqlnlelddaanqvlcycyegnllalaqalerlsllwpdgkltlprveqavndaahftpfhwvdallmgkskralhilqqlrlegsepvillrtlqrellllvnlkrqsahtplralfdkhrvwqnrrgmmgealnrlsqtqlrqavqlltrteltlkqdYgqsvwaeleglslllch >3glf_ABCDE:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_polymerase_III_clamp_loader_subunits,_C-terminal_domain; title=CRYSTAL STRUCTURE OF THE ECOLI CLAMP LOADER BOUND TO PRIMER-TEMPLATE DNA organism=ESCHERICHIA COLI DNA sequence DT(K6):DA(L10) DA(K7):DT(L9) DT(K8):DA(L8) DA(K9):DT(L7) DG(K10):DC(L6) DG(K11):DC(L5) DC(K12):DG(L4) DC(K13):DG(L3) DA(K14):DT(L2) DG(K15):DC(L1) chainA (316) TYR316 36 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE prot.sequence mirlypeqlraqlneglraaylllgndplllqesqdavrqvaaaqgfeehhtfsidpntdwnaifslcqamslfasrqtlllllpengpnaaineqlltltgllhddlllivrgnklskaqenaawftalanrsvqvtcqtpeqaqlprwvaarakqlnlelddaanqvlcycyegnllalaqalerlsllwpdgkltlprveqavndaahftpfhwvdallmgkskralhilqqlrlegsepvillrtlqrellllvnlkrqsahtplralfdkhrvwqnrrgmmgealnrlsqtqlrqavqlltrteltlkqdYgqsvwaeleglslllch/vlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtkvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartIpptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprmplpep/qvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtkvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelarTipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprmplpep/syqvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtkvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelArtipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprm/mrwypwlrpdfeklvasyqagrghhalliqalpgmgddaliyalsryllcqqpqghkscghcrgcqlmqagthpdyytlapekgkntlgvdavrevteklneharlggakvvwvtdaalltdaaanallktleeppaetwfflatreperllatlrsrcrlhylapppeqyavtwlsrevtmsqdallaalrlsagspgaalalfqgdnwqaretlcqalaysvpsgdwysllaalnheqaparlhwlatllmdalkrhhgaaqvtnvdvpglvaelanhlspsrlqailgdvchireqlmsvtginrellitdlLlriehylqpgvvlpvphl >3glf_FGHIJ:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_polymerase_III_clamp_loader_subunits,_C-terminal_domain; title=CRYSTAL STRUCTURE OF THE ECOLI CLAMP LOADER BOUND TO PRIMER-TEMPLATE DNA organism=ESCHERICHIA COLI DNA sequence DT(M6):DA(N10) DA(M7):DT(N9) DT(M8):DA(N8) DA(M9):DT(N7) DG(M10):DC(N6) DG(M11):DC(N5) DC(M12):DG(N4) DC(M13):DG(N3) DA(M14):DT(N2) DG(M15):DC(N1) chainF (316) TYR316 49 0 0 0 0 0 0 0 0 0 chainG (110) LYS100 0 0 0 0 0 0 0 0 1 0 chainH chainI chainJ prot.sequence mirlypeqlraqlneglraaylllgndplllqesqdavrqvaaaqgfeehhtfsidpntdwnaifslcqamslfasrqtlllllpengpnaaineqlltltgllhddlllivrgnklskaqenaawftalanrsvqvtcqtpeqaqlprwvaarakqlnlelddaanqvlcycyegnllalaqalerlsllwpdgkltlprveqavndaahftpfhwvdallmgkskralhilqqlrlegsepvillrtlqrellllvnlkrqsahtplralfdkhrvwqnrrgmmgealnrlsqtqlrqavqlltrteltlkqdYgqsvwaeleglslllch/glevlfqgphmsyqvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtKvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprmplpep/qvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtkvedtrdlldnvqYapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprmplpep/syqvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtkvedtrdlldnVqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprm/mrwypwlrpdfeklvasyqagrghhalliqalpgmgddaliyalsryllcqqpqghkscghcrgcqlmqagthpdyytlapekgkntlgvdavrevteklneharlggaKvvwvtdaalltdaaanallktleeppaetwfflatreperllatlrsrcrlhylapppeqyavtwlsrevtmsqdallaalrlsagspgaalalfqgdnwqaretlcqalaysvpsgdwysllaalnheqaparlhwlatllmdalkrhhgaaqvtnvdvpglvaelanhlspsrlqailgdvchireqlmsvtginrellitdlllriehylqpgvvlpvphl >3glg_ABCDE:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_polymerase_III_clamp_loader_subunits,_C-terminal_domain; title=CRYSTAL STRUCTURE OF A MUTANT (GAMMAT157A) E. COLI CLAMP LOADER BOUND TO PRIMER-TEMPLATE DNA organism=ESCHERICHIA COLI DNA sequence DT(K11):DA(L10) DA(K12):DT(L9) DT(K13):DA(L8) DA(K14):DT(L7) DG(K15):DC(L6) DG(K16):DC(L5) DC(K17):DG(L4) DC(K18):DG(L3) DA(K19):DT(L2) DG(K20):DC(L1) chainA (316) TYR316 35 0 0 0 0 0 0 0 0 0 chainB ( 96) LYS100 0 0 0 0 0 0 0 0 1 0 chainC chainD chainE prot.sequence mirlypeqlraqlneglraaylllgndplllqesqdavrqvaaaqgfeehhtfsidpntdwnaifslcqamslfasrqtlllllpengpnaaineqlltltgllhddlllivrgnklskaqenaawftalanrsvqvtcqtpeqaqlprwvaarakqlnlelddaanqvlcycyegnllalaqalerlsllwpdgkltlprveqavndaahftpfhwvdallmgkskralhilqqlrlegsepvillrtlqrellllvnlkrqsahtplralfdkhrvwqnrrgmmgealnrlsqtqlrqavqlltrteltlkqdYgqsvwaeleglslllch/vlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtKvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllatadpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprmplpep/qvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrTkvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllatadpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprmplpep/syqvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaaSrtkvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllatadpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprm/mrwypwlrpdfeklvasyqagrghhalliqalpgmgddaliyalsryllcqqpqghkscghcrgcqlmqagthpdyytlapekgkntlgvdavreVteklneharlggakvvwvtdaalltdaaanallktleeppaetwfflatreperllatlrsrcrlhylapppeqyavtwlsrevtmsqdallaalrlsagspgaalalfqgdnwqaretlcqalaysvpsgdwysllaalnheqaparlhwlatllmdalkrhhgaaqvtnvdvpglvaelanhlspsrlqailgdvchireqlmsvtginrellitdlllriehylqpgvvlpvphl >3glg_B:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_polymerase_III_clamp_loader_subunits,_C-terminal_domain; title=CRYSTAL STRUCTURE OF A MUTANT (GAMMAT157A) E. COLI CLAMP LOADER BOUND TO PRIMER-TEMPLATE DNA organism=ESCHERICHIA COLI DNA sequence DT(K11):DA(L10) DA(K12):DT(L9) DT(K13):DA(L8) DA(K14):DT(L7) DG(K15):DC(L6) DG(K16):DC(L5) DC(K17):DG(L4) DC(K18):DG(L3) DA(K19):DT(L2) DG(K20):DC(L1) chainB ( 96) LYS100 0 0 0 0 0 0 0 0 1 0 prot.sequence vlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtKvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllatadpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprmplpep >3glg_FGHIJ:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_polymerase_III_clamp_loader_subunits,_C-terminal_domain; title=CRYSTAL STRUCTURE OF A MUTANT (GAMMAT157A) E. COLI CLAMP LOADER BOUND TO PRIMER-TEMPLATE DNA organism=ESCHERICHIA COLI DNA sequence DC(N1):DG(M20) DT(N2):DA(M19) DG(N3):DC(M18) DG(N4):DC(M17) DC(N5):DG(M16) DC(N6):DG(M15) DT(N7):DA(M14) DA(N8):DT(M13) DT(N9):DA(M12) DA(N10):DT(M11) chainF (316) TYR316 0 0 0 0 0 0 0 0 0 51 chainG (110) LYS100 0 1 0 0 0 0 0 0 0 0 chainH chainI chainJ prot.sequence mirlypeqlraqlneglraaylllgndplllqesqdavrqvaaaqgfeehhtfsidpntdwnaifslcqamslfasrqtlllllpengpnaaineqlltltgllhddlllivrgnklskaqenaawftalanrsvqvtcqtpeqaqlprwvaarakqlnlelddaanqvlcycyegnllalaqalerlsllwpdgkltlprveqavndaahftpfhwvdallmgkskralhilqqlrlegsepvillrtlqrellllvnlkrqsahtplralfdkhrvwqnrrgmmgealnrlsqtqlrqavqlltrteltlkqdYgqsvwaeleglslllch/glevlfqgphmsyqvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtKvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllatadpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprmplpep/qvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtkvedtrdlldnvqYapargrfkvylidevhmlsrhsfnallktleeppehvkfllatadpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprmplpep/syqvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtkvedtrdlldnVqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllatadpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprm/mrwypwlrpdfeklvasyqagrghhalliqalpgmgddaliyalsryllcqqpqghkscghcrgcqlmqagthpdyytlapekgkntlgvdavrevteklneharlggaKvvwvtdaalltdaaanallktleeppaetwfflatreperllatlrsrcrlhylapppeqyavtwlsrevtmsqdallaalrlsagspgaalalfqgdnwqaretlcqalaysvpsgdwysllaalnheqaparlhwlatllmdalkrhhgaaqvtnvdvpglvaelanhlspsrlqailgdvchireqlmsvtginrellitdlllriehylqpgvvlpvphl >3gli_ABCDE:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_polymerase_III_clamp_loader_subunits,_C-terminal_domain; title=CRYSTAL STRUCTURE OF THE E. COLI CLAMP LOADER BOUND TO PRIMER- TEMPLATE DNA AND PSI PEPTIDE organism=ESCHERICHIA COLI DNA sequence DT(K6):DA(L10) DA(K7):DT(L9) DT(K8):DA(L8) DA(K9):DT(L7) DG(K10):DC(L6) DG(K11):DC(L5) DC(K12):DG(L4) DC(K13):DG(L3) DA(K14):DT(L2) DG(K15):DC(L1) chainA (316) TYR316 26 0 0 0 0 0 0 0 0 0 chainB ( 96) LYS100 0 0 0 0 0 0 0 0 1 0 chainC chainD chainE prot.sequence mirlypeqlraqlneglraaylllgndplllqesqdavrqvaaaqgfeehhtfsidpntdwnaifslcqamslfasrqtlllllpengpnaaineqlltltgllhddlllivrgnklskaqenaawftalanrsvqvtcqtpeqaqlprwvaarakqlnlelddaanqvlcycyegnllalaqalerlsllwpdgkltlprveqavndaahftpfhwvdallmgkskralhilqqlrlegsepvillrtlqrellllvnlkrqsahtplralfdkhrvwqnrrgmmgealnrlsqtqlrqavqlltrteltlkqdYgqsvwaeleglslllch/vlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtKvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprm/qvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrTkvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprmplpep/syqvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaaSrtkvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprm/mrwypwlrpdfeklvasyqagrghhalliqalpgmgddaliyalsryllcqqpqghkscghcrgcqlmqagthpdyytlapekgkntlgvdavreVteklneharlggakvvwvtdaalltdaaanallktleeppaetwfflatreperllatlrsrcrlhylapppeqyavtwlsrevtmsqdallaalrlsagspgaalalfqgdnwqaretlcqalaysvpsgdwysllaalnheqaparlhwlatllmdalkrhhgaaqvtnvdvpglvaelanhlspsrlqailgdvchireqlmsvtginrellitdlllriehylqpgvvlpvphl >3gli_FGHIJ:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_polymerase_III_clamp_loader_subunits,_C-terminal_domain; title=CRYSTAL STRUCTURE OF THE E. COLI CLAMP LOADER BOUND TO PRIMER- TEMPLATE DNA AND PSI PEPTIDE organism=ESCHERICHIA COLI DNA sequence DC(N1):DG(M15) DT(N2):DA(M14) DG(N3):DC(M13) DG(N4):DC(M12) DC(N5):DG(M11) DC(N6):DG(M10) DT(N7):DA(M9) DA(N8):DT(M8) DT(N9):DA(M7) DA(N10):DT(M6) chainF (316) TYR316 0 0 0 0 0 0 0 0 0 45 chainG (110) LYS100 0 1 0 0 0 0 0 0 0 0 chainH chainI chainJ prot.sequence mirlypeqlraqlneglraaylllgndplllqesqdavrqvaaaqgfeehhtfsidpntdwnaifslcqamslfasrqtlllllpengpnaaineqlltltgllhddlllivrgnklskaqenaawftalanrsvqvtcqtpeqaqlprwvaarakqlnlelddaanqvlcycyegnllalaqalerlsllwpdgkltlprveqavndaahftpfhwvdallmgkskralhilqqlrlegsepvillrtlqrellllvnlkrqsahtplralfdkhrvwqnrrgmmgealnrlsqtqlrqavqlltrteltlkqdYgqsvwaeleglslllchk/glevlfqgphmsyqvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtKvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprm/qvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtkvedtrdlldnvqYapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprmplpep/syqvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtkvedtrdlldnVqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprm/mrwypwlrpdfeklvasyqagrghhalliqalpgmgddaliyalsryllcqqpqghkscghcrgcqlmqagthpdyytlapekgkntlgvdavrevteklneharlggaKvvwvtdaalltdaaanallktleeppaetwfflatreperllatlrsrcrlhylapppeqyavtwlsrevtmsqdallaalrlsagspgaalalfqgdnwqaretlcqalaysvpsgdwysllaalnheqaparlhwlatllmdalkrhhgaaqvtnvdvpglvaelanhlspsrlqailgdvchireqlmsvtginrellitdlllriehylqpgvvlpvphl >3gli_G:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_polymerase_III_clamp_loader_subunits,_C-terminal_domain; title=CRYSTAL STRUCTURE OF THE E. COLI CLAMP LOADER BOUND TO PRIMER- TEMPLATE DNA AND PSI PEPTIDE organism=? DNA sequence DT(M6):DA(N10) DA(M7):DT(N9) DT(M8):DA(N8) DA(M9):DT(N7) DG(M10):DC(N6) DG(M11):DC(N5) DC(M12):DG(N4) DC(M13):DG(N3) DA(M14):DT(N2) DG(M15):DC(N1) chainG (110) LYS100 0 0 0 0 0 0 0 0 1 0 prot.sequence glevlfqgphmsyqvlarkwrpqtfadvvgqehvltalanglslgrihhaylfsgtrgvgktsiarllakglncetgitatpcgvcdncreieqgrfvdlieidaasrtKvedtrdlldnvqyapargrfkvylidevhmlsrhsfnallktleeppehvkfllattdpqklpvtilsrclqfhlkaldveqirhqlehilneehiahepralqllaraaegslrdalsltdqaiasgdgqvstqavsamlgtldddqalslveamveangervmalineaaargieweallvemlgllhriamvqlspaalgndmaaielrmrelartipptdiqlyyqtlligrkelpyapdrrmgvemtllralafhprm >3gna_A: title=CRYSTAL STRUCTURE OF THE RAG1 NONAMER-BINDING DOMAIN WITH DNA organism=Mus musculus DNA sequence DA(D1) DC(D2) DT(D3) DT(D4) DA(D5) DA(D6) DC(D7) DA(D8) DA(D9) DA(D10) DA(D11) DA(D12) DC(D13) DC(D14) chainA ( 3) ARG391 0 0 0 0 0 0 0 0 0 1 10 3 0 0 ( 14) ARG402 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 17) LYS405 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence ggRprqhllsltrRaqKhrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimq >3gnb_A: title=CRYSTAL STRUCTURE OF THE RAG1 NONAMER-BINDING DOMAIN WITH DNA organism=Mus musculus DNA sequence DA(D1) DA(D2) DT(D3) DT(D4) DT(D5) DT(D6) DC(D7) DA(D8) DG(D9) DA(D10) DA(D11) DA(D12) DC(D13) DC(D14) chainA ( 3) ARG391 0 0 0 0 0 0 0 0 0 2 12 3 0 0 ( 14) ARG402 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 17) LYS405 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence ggRprqhllsltrRaqKhrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimq >3go8_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC3- LOOP DELETION COMPLEX organism=Geobacillus stearothermophilus DNA sequence DG(B3):DC(C15) DT(B4):DA(C14) DA(B5):DT(C13) DG(B6):DC(C12) DA(B7):DT(C11) DT(B8):DA(C10) DC(B9):DG(C9) DC(B10):8OG(C8) DG(B11):DC(C7) DG(B12):DC(C6) DA(B13):DT(C5) DC(B14):DG(C4) DG(B15):DC(C3) chainA ( 75) ARG76 0 0 0 0 0 1 12 0 0 0 0 0 0 (111) ARG112 0 0 0 0 0 0 0 6 13 5 0 0 0 (113) PHE114 0 0 0 0 0 0 26 31 0 0 0 0 0 (242) ARG264 0 0 0 0 0 2 6 5 0 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRmegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3gox_A:His-Me_finger_endonucleases; title=CRYSTAL STRUCTURE OF THE BETA-BETA-ALPHA-ME TYPE II RESTRICTION ENDONUCLEASE HPY99I IN THE ABSENCE OF EDTA organism=Helicobacter pylori DNA sequence DT(D-4):DA(C4) DA(D-3):DT(C3) DC(D-2):DG(C2) DG(D-1):DC(C1) DT(D0):DA(C0) DC(D1):DG(C-1) DG(D2):DC(C-2) DA(D3):DT(C-3) DG(D4):DC(C-4) chainA ( 82) ILE82 0 0 0 0 0 0 0 1 0 ( 83) ASN83 0 0 0 0 3 7 7 4 0 ( 84) GLN84 0 0 0 0 9 7 11 0 0 ( 92) THR92 0 0 0 0 1 0 0 0 0 ( 94) ARG94 0 0 0 0 0 2 13 3 0 (101) ARG101 0 0 0 0 0 0 2 0 0 (162) ASP162 0 0 0 0 0 3 5 0 0 (166) THR166 0 0 0 0 0 9 4 0 0 (170) ARG170 0 0 0 3 5 5 0 0 0 prot.sequence mlknddfviaknqlgnivpnsvgviravngksamvlfiglnelkrvdfseleaidiyrtgkgydkkicnichilkntdgfEINQtdakgrkTtRpscrecRknidgvklsstekkkmdeiappkgsvftcpicekrsivgvtanlvhdhnhdtgwgrewicDscnTglgRfkdnpkflekvieylkkye >3gox_AB:His-Me_finger_endonucleases; title=CRYSTAL STRUCTURE OF THE BETA-BETA-ALPHA-ME TYPE II RESTRICTION ENDONUCLEASE HPY99I IN THE ABSENCE OF EDTA organism=Helicobacter pylori DNA sequence DC(C-4):DG(D4) DT(C-3):DA(D3) DC(C-2):DG(D2) DG(C-1):DC(D1) DA(C0):DT(D0) DC(C1):DG(D-1) DG(C2):DC(D-2) DT(C3):DA(D-3) DA(C4):DT(D-4) chainA ( 82) ILE82 0 1 0 0 0 0 0 0 0 ( 83) ASN83 0 4 7 7 3 0 0 0 0 ( 84) GLN84 0 0 11 7 9 0 0 0 0 ( 92) THR92 0 0 0 0 1 0 0 0 0 ( 94) ARG94 0 3 13 2 0 0 0 0 0 (101) ARG101 0 0 2 0 0 0 0 0 0 (162) ASP162 0 0 5 3 0 0 0 0 0 (166) THR166 0 0 4 9 0 0 0 0 0 (170) ARG170 0 0 0 5 5 3 0 0 0 chainB ( 81) GLU81 0 0 0 0 0 0 0 0 3 ( 83) ASN83 0 0 0 0 1 7 7 3 0 ( 84) GLN84 0 0 0 0 3 7 11 0 0 ( 94) ARG94 0 0 0 0 0 2 13 5 0 (101) ARG101 0 0 0 0 0 0 1 0 0 (162) ASP162 0 0 0 0 0 3 5 0 0 (166) THR166 0 0 0 0 0 9 4 0 0 (170) ARG170 0 0 0 3 8 5 0 0 0 prot.sequence mlknddfviaknqlgnivpnsvgviravngksamvlfiglnelkrvdfseleaidiyrtgkgydkkicnichilkntdgfEINQtdakgrkTtRpscrecRknidgvklsstekkkmdeiappkgsvftcpicekrsivgvtanlvhdhnhdtgwgrewicDscnTglgRfkdnpkflekvieylkkye/mlknddfviaknqlgnivpnsvgviravngksamvlfiglnelkrvdfseleaidiyrtgkgydkkicnichilkntdgfEiNQtdakgrkttRpscrecRknidgvklsstekkkmdeiappkgsvftcpicekrsivgvtanlvhdhnhdtgwgrewicDscnTglgRfkdnpkflekvieylkkye >3gp1_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC3- V222P COMPLEX organism=Geobacillus stearothermophilus DNA sequence DG(C4):DC(B14) DT(C5):DA(B13) DC(C6):DG(B12) DC(C7):DG(B11) 8OG(C8):DC(B10) DG(C9):DC(B9) DA(C10):DT(B8) DT(C11):DA(B7) DC(C12):DG(B6) DT(C13):DA(B5) DA(C14):DT(B4) DC(C15):DG(B3) chainA ( 75) ARG76 0 0 0 0 0 12 1 0 0 0 0 0 (111) ARG112 0 0 5 13 6 0 0 0 0 0 0 0 (113) PHE114 0 0 0 0 28 27 0 0 0 0 0 0 (242) ARG264 0 0 0 0 4 6 0 0 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniiRhprdseafaarmigqtvrglerrgkflkflldrdalishlRmegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3gpp_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC3- T224P COMPLEX organism=Geobacillus stearothermophilus DNA sequence DG(B3):DC(C15) DT(B4):DA(C14) DA(B5):DT(C13) DG(B6):DC(C12) DA(B7):DT(C11) DT(B8):DA(C10) DC(B9):DG(C9) DC(B10):8OG(C8) DG(B11):DC(C7) DG(B12):DC(C6) DA(B13):DT(C5) DC(B14):DG(C4) chainA ( 75) ARG76 0 0 0 0 0 1 12 0 0 0 0 0 (111) ARG112 0 0 0 0 0 0 0 6 13 5 0 0 (113) PHE114 0 0 0 0 0 0 28 32 0 0 0 0 (241) ARG264 0 0 0 0 0 2 6 3 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRmegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3gpu_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC4- LOOP DELETION COMPLEX organism=Geobacillus stearothermophilus DNA sequence DG(C4):DC(B14) DT(C5):DA(B13) DC(C6):DG(B12) DC(C7):DG(B11) 8OG(C8):DC(B10) DA(C9):DT(B9) DG(C10):DC(B8) DT(C11):DA(B7) DC(C12):DG(B6) DT(C13):DA(B5) DA(C14):DT(B4) DC(C15):DG(B3) chainA ( 75) ARG76 0 0 0 0 0 9 1 0 0 0 0 0 ( 76) MET77 0 0 0 0 3 0 0 0 0 0 0 0 (111) ARG112 0 0 5 13 7 0 0 0 0 0 0 0 (113) PHE114 0 0 0 0 29 22 0 0 0 0 0 0 (241) ARG264 0 0 0 0 5 4 1 0 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRmegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3gpx_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=SEQUENCE-MATCHED MUTM INTERROGATION COMPLEX 4 (IC4) organism=Geobacillus stearothermophilus DNA sequence DG(B3):DC(C15) DT(B4):DA(C14) DA(B5):DT(C13) DG(B6):DC(C12) DA(B7):DT(C11) DC(B8):DG(C10) DT(B9):DA(C9) DC(B10):DG(C8) DG(B11):DC(C7) DG(B12):DC(C6) DA(B13):DT(C5) chainA ( 75) ARG76 0 0 0 0 0 4 9 0 0 0 0 ( 76) MET77 0 0 0 0 0 0 0 3 0 0 0 (111) ARG112 0 0 0 0 0 0 0 6 13 5 0 (113) PHE114 0 0 0 0 0 0 25 25 0 0 0 (242) ARG264 0 0 0 0 0 1 4 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniiRhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3gpy_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=SEQUENCE-MATCHED MUTM LESION RECOGNITION COMPLEX 3 (LRC3) organism=Geobacillus stearothermophilus DNA sequence DG(C2):DC(B16) DC(C3):DG(B15) DG(C4):DC(B14) DT(C5):DA(B13) DC(C6):DG(B12) DC(C7):DG(B11) 8OG(C8):DC(B10) DG(C9):DC(B9) DA(C10):DT(B8) DT(C11):DA(B7) DC(C12):DG(B6) DT(C13):DA(B5) DA(C14):DT(B4) DC(C15):DG(B3) DC(C16):DG(B2) chainA ( 1) PRO2 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 2) GLN3 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 5) GLU6 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 ( 75) ARG76 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 76) MET77 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 ( 77) GLU78 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (111) ARG112 0 0 0 0 0 84 15 2 0 0 0 0 0 0 0 (113) PHE114 0 0 0 0 0 0 10 49 0 0 0 0 0 0 0 (174) ILE175 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (221) VAL222 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (222) ARG223 0 0 0 0 0 2 18 0 0 0 0 0 0 0 0 (223) THR224 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (224) TYR225 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (263) ARG264 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMEgryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkggstvRtyvntqgeagtfqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3gq3_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC5- LOOP DELETION COMPLEX organism=Geobacillus stearothermophilus DNA sequence DG(B2):DC(C16) DG(B3):DC(C15) DT(B4):DA(C14) DA(B5):DT(C13) DG(B6):DC(C12) DA(B7):DT(C11) DC(B8):DG(C10) DC(B9):8OG(C9) DC(B10):DG(C8) DG(B11):DC(C7) DG(B12):DC(C6) DA(B13):DT(C5) DC(B14):DG(C4) chainA ( 75) ARG76 0 0 0 0 0 1 15 0 0 0 0 0 0 (111) ARG112 0 0 0 0 0 0 0 7 11 6 0 0 0 (113) PHE114 0 0 0 0 0 0 24 35 0 0 0 0 0 (240) ARG264 0 0 0 0 0 1 2 3 0 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniiRhprdseafaarmigqtvrglerrgkflkflldrdalishlRmEgryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeahlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3gq4_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=SEQUENCE-MATCHED MUTM LESION RECOGNITION COMPLEX 5 (LRC5) organism=Geobacillus stearothermophilus DNA sequence DA(B5):DT(C13) DG(B6):DC(C12) DA(B7):DT(C11) DC(B8):DG(C10) DC(B9):8OG(C9) DC(B10):DG(C8) DG(B11):DC(C7) DG(B12):DC(C6) DA(B13):DT(C5) DC(B14):DG(C4) DG(B15):DC(C3) chainA ( 1) PRO2 0 0 0 0 3 0 0 0 0 0 0 ( 2) GLN3 0 0 0 0 5 0 0 0 0 0 0 ( 5) GLU6 0 0 0 0 9 0 0 0 0 0 0 ( 75) ARG76 0 0 3 18 0 0 0 0 0 0 0 ( 76) MET77 0 0 0 16 2 0 0 0 0 0 0 ( 77) GLU78 0 0 0 0 4 0 0 0 0 0 0 (111) ARG112 0 0 0 4 15 40 0 0 0 0 0 (113) PHE114 0 0 0 98 11 0 0 0 0 0 0 (174) ILE175 0 0 0 0 5 0 0 0 0 0 0 (220) THR221 0 0 0 0 2 0 0 0 0 0 0 (221) VAL222 0 0 0 0 7 0 0 0 0 0 0 (222) ARG223 0 0 0 0 19 0 0 0 0 0 0 (223) THR224 0 0 0 0 6 0 0 0 0 0 0 (224) TYR225 0 0 0 0 7 0 0 0 0 0 0 (263) ARG264 0 0 4 2 0 0 0 0 0 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMEgryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkggstvrtyvntqgeagtfqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3gq5_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=SEQUENCE-MATCHED MUTM INTERROGATION COMPLEX 5 (IC5) organism=Geobacillus stearothermophilus DNA sequence DG(B3):DC(C15) DT(B4):DA(C14) DA(B5):DT(C13) DG(B6):DC(C12) DA(B7):DT(C11) DC(B8):DG(C10) DC(B9):DG(C9) DC(B10):DG(C8) DG(B11):DC(C7) DG(B12):DC(C6) chainA ( 75) ARG76 0 0 0 0 1 11 0 0 0 0 (111) ARG112 0 0 0 0 0 0 5 11 5 0 (113) PHE114 0 0 0 0 0 22 37 0 0 0 (242) ARG264 0 0 0 0 2 7 4 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniiRhprdseafaarmigqtvrglerrgkflkflldrdalishlRmEgryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3gqc_A:DNA/RNA_polymerases; title=STRUCTURE OF HUMAN REV1-DNA-DNTP TERNARY COMPLEX organism=Homo sapiens DNA sequence DA(E1):DT(F16) DT(E2):DA(F15) DC(E3):DG(F14) DC(E4):DG(F13) DT(E5):DA(F12) DC(E6):DG(F11) DC(E7):DG(F10) DC(E8):DG(F9) DC(E9):DG(F8) DT(E10):DA(F7) DA(E11):DT(F6) chainA ( 19) SER362 0 0 0 0 0 0 0 0 0 0 3 (322) GLU715 0 0 0 0 0 0 0 0 0 0 6 prot.sequence sdcnfisnfyshsrlhhiSmwkceltefvntlqrfpgreklkkqscimhvdmdcffvsvgirnrpdlkgkpvavtsnrgtgraplrpganpqlewqyyqnkilkgidsvlsraeiascsyearqlgikngmffghakqlcpnlqavpydfhaykevaqtlyetlasythnieavscdealvditeilaetkltpdefanavrmeikdqtkcaasvgigsnillarmatrkakpdgqyhlkpeevddfirgqlvtnlpgvghsmesklaslgiktcgdlqymtmaklqkefgpktgqmlyrfcrglddrpvrtekerksvsaEinygirftqpkeaeafllslseeiqrrleatgmkgkrltlkimvrkpgapvetakfgghgicdniartvtldqatdnakiigkamlnmfhtmklnisdmrgvgihvnqlvptn >3gtg_AE: title=BACKTRACKED RNA POLYMERASE II COMPLEX WITH 12MER RNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(N1):DG(T14) DT(N2):DA(T13) DG(N3):DC(T12) DC(N4):DG(T11) DT(N5):DA(T10) DT(N6):DA(T9) DA(N7):DT(T8) DT(N8):DA(T7) DC(N9):DG(T6) DG(N10):DC(T5) DG(N11):DC(T4) DT(N12):DA(T3) DA(N13):DT(T2) DG(N14):DC(T1) chainA (1378) HIS1387 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrHgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslv/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >3gtk_ABE: title=BACKTRACKED RNA POLYMERASE II COMPLEX WITH 18MER RNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(N1):DG(T14) DT(N2):DA(T13) DG(N3):DC(T12) DC(N4):DG(T11) DT(N5):DA(T10) DT(N6):DA(T9) DA(N7):DT(T8) DT(N8):DA(T7) DC(N9):DG(T6) DG(N10):DC(T5) DG(N11):DC(T4) DT(N12):DA(T3) DA(N13):DT(T2) DG(N14):DC(T1) chainA (1378) HIS1387 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrHgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslv/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhttesdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveeahdfnmklainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdieggfedveeytwssllneglveyidaeeeesiliamqpedlepaeaneendldvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdr/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >3gtm_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CO-COMPLEX OF BACKTRACKED RNA POLYMERASE II WITH TFIIS organism=? DNA sequence DG(O3):DC(N12) DC(O4):DG(N11) DT(O5):DA(N10) DT(O6):DA(N9) DA(O7):DT(N8) DT(O8):DA(N7) DC(O9):DG(N6) DG(O10):DC(N5) DG(O11):DC(N4) DT(O12):DA(N3) DA(O13):DT(N2) chainA (142) LYS143 0 0 0 1 0 0 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >3gtm_ABE:Elongation_factor_TFIIS_domain_2;Zinc_beta-ribbon; title=CO-COMPLEX OF BACKTRACKED RNA POLYMERASE II WITH TFIIS organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(O3):DC(N12) DC(O4):DG(N11) DT(O5):DA(N10) DT(O6):DA(N9) DA(O7):DT(N8) DT(O8):DA(N7) DC(O9):DG(N6) DG(O10):DC(N5) DG(O11):DC(N4) DT(O12):DA(N3) DA(O13):DT(N2) chainA (142) LYS143 0 0 0 1 0 0 0 0 0 0 0 chainB chainE prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsEkvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqssragvsqvlnrytysstlshlrrtntpiklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf/dqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvNithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >3gtq_AB: title=BACKTRACKED RNA POLYMERASE II COMPLEX INDUCED BY DAMAGE organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T17) DT(T18) DC(T19) DC(T20) DT(T21) DC(T22) DT(T23) DC(T24) DC(T25) DA(T26) DT(T27) DC(T28) chainA (232) PHE252 0 0 0 0 0 0 0 0 0 0 5 0 (237) ARG257 0 0 0 0 0 0 0 0 0 0 0 3 (297) LYS317 0 0 0 0 0 0 0 0 0 0 0 5 (330) ARG350 0 0 0 0 1 0 0 0 0 0 0 0 (427) GLN447 0 0 0 1 0 0 0 0 0 0 0 0 (428) PRO448 0 0 4 0 0 0 0 0 0 0 0 0 (811) THR831 0 12 0 0 0 0 0 0 0 0 0 0 (812) ALA832 0 3 0 0 0 0 0 0 0 0 0 0 chainB (1005) SER1123 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisFnesqRgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqKsgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrSrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3gtq_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=BACKTRACKED RNA POLYMERASE II COMPLEX INDUCED BY DAMAGE organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T17) DT(T18) DC(T19) DC(T20) DT(T21) DC(T22) DT(T23) DC(T24) DC(T25) DA(T26) DT(T27) DC(T28) chainB (1005) SER1123 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrSrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3gut_ABD:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF A HIGHER-ORDER COMPLEX OF P50:RELA BOUND TO THE HIV-1 LTR organism=HOMO SAPIENS DNA sequence DT(Y2):DA(X26) DG(Y3):DC(X25) DG(Y4):DC(X24) DA(Y5):DT(X23) DA(Y6):DT(X22) DA(Y7):DT(X21) DG(Y8):DC(X20) DT(Y9):DA(X19) DC(Y10):DG(X18) DC(Y11):DG(X17) DC(Y12):DG(X16) DC(Y13):DG(X15) DA(Y14):DT(X14) DG(Y15):DC(X13) DC(Y16):DG(X12) DG(Y17):DC(X11) DG(Y18):DC(X10) DA(Y19):DT(X9) DA(Y20):DT(X8) DA(Y21):DT(X7) DG(Y22):DC(X6) DT(Y23):DA(X5) DC(Y24):DG(X4) DC(Y25):DG(X3) DC(Y26):DG(X2) chainA ( 15) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 1 0 0 0 0 0 0 0 ( 17) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 ( 18) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 (169) ARG187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 chainB ( 16) ARG354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 ( 18) ARG356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 ( 19) TYR357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 ( 22) GLU360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 (203) LYS541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 chainD ( 16) ARG354 0 0 0 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG356 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR357 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) CYS359 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU360 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) HIS364 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) LYS541 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ayveiieqpkqrgmRfRYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/gpylqileqpkqrgfRfRYvcEgpshgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype/gpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >3gut_CF:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF A HIGHER-ORDER COMPLEX OF P50:RELA BOUND TO THE HIV-1 LTR organism=HOMO SAPIENS DNA sequence DG(X2):DC(Y26) DG(X3):DC(Y25) DG(X4):DC(Y24) DA(X5):DT(Y23) DC(X6):DG(Y22) DT(X7):DA(Y21) DT(X8):DA(Y20) DT(X9):DA(Y19) DC(X10):DG(Y18) DC(X11):DG(Y17) DG(X12):DC(Y16) DC(X13):DG(Y15) DT(X14):DA(Y14) DG(X15):DC(Y13) DG(X16):DC(Y12) DG(X17):DC(Y11) DG(X18):DC(Y10) DA(X19):DT(Y9) DC(X20):DG(Y8) DT(X21):DA(Y7) DT(X22):DA(Y6) DT(X23):DA(Y5) DC(X24):DG(Y4) DC(X25):DG(Y3) DA(X26):DT(Y2) DA(I1):DT(Y1) DG(I2):DC(J26) DG(I3):DC(J25) DG(I4):DC(J24) DA(I5):DT(J23) DC(I6):DG(J22) DT(I7):DA(J21) DT(I8):DA(J20) DT(I9):DA(J19) DC(I10):DG(J18) DC(I11):DG(J17) DG(I12):DC(J16) DC(I13):DG(J15) DT(I14):DA(J14) DG(I15):DC(J13) DG(I16):DC(J12) DG(I17):DC(J11) DG(I18):DC(J10) DA(I19):DT(J9) DC(I20):DG(J8) DT(I21):DA(J7) DT(I22):DA(J6) DT(I23):DA(J5) DC(I24):DG(J4) DC(I25):DG(J3) DA(I26):DT(J2) chainC ( 15) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ARG187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 16) ARG354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) HIS364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) LYS541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ayveiieqpkqrgmRfRYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/gpylqileqpkqrgfRfRYvcEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >3gut_D:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF A HIGHER-ORDER COMPLEX OF P50:RELA BOUND TO THE HIV-1 LTR organism=? DNA sequence DT(Y2):DA(X26) DG(Y3):DC(X25) DG(Y4):DC(X24) DA(Y5):DT(X23) DA(Y6):DT(X22) DA(Y7):DT(X21) DG(Y8):DC(X20) DT(Y9):DA(X19) DC(Y10):DG(X18) DC(Y11):DG(X17) DC(Y12):DG(X16) DC(Y13):DG(X15) DA(Y14):DT(X14) DG(Y15):DC(X13) DC(Y16):DG(X12) DG(Y17):DC(X11) DG(Y18):DC(X10) DA(Y19):DT(X9) DA(Y20):DT(X8) DA(Y21):DT(X7) DG(Y22):DC(X6) DT(Y23):DA(X5) DC(Y24):DG(X4) DC(Y25):DG(X3) DC(Y26):DG(X2) chainD ( 16) ARG354 0 0 0 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG356 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR357 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) CYS359 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU360 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) HIS364 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) LYS541 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >3gut_EGH:p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF A HIGHER-ORDER COMPLEX OF P50:RELA BOUND TO THE HIV-1 LTR organism=HOMO SAPIENS DNA sequence DG(I2):DC(J26) DG(I3):DC(J25) DG(I4):DC(J24) DA(I5):DT(J23) DC(I6):DG(J22) DT(I7):DA(J21) DT(I8):DA(J20) DT(I9):DA(J19) DC(I10):DG(J18) DC(I11):DG(J17) DG(I12):DC(J16) DC(I13):DG(J15) DT(I14):DA(J14) DG(I15):DC(J13) DG(I16):DC(J12) DG(I17):DC(J11) DG(I18):DC(J10) DA(I19):DT(J9) DC(I20):DG(J8) DT(I21):DA(J7) DT(I22):DA(J6) DT(I23):DA(J5) DC(I24):DG(J4) DC(I25):DG(J3) DA(I26):DT(J2) chainE ( 15) ARG33 0 0 0 0 0 0 0 1 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG35 0 0 0 0 0 0 0 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) TYR36 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ARG187 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 15) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 6 0 ( 17) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 ( 18) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 (169) ARG187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 chainH ( 16) ARG354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 1 0 0 0 0 0 0 0 ( 18) ARG356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 ( 19) TYR357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 ( 21) CYS359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 22) GLU360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 ( 26) HIS364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (203) LYS541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 prot.sequence ayveiieqpkqrgmRfRYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/ayveiieqpkqrgmRfRYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/gpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >3gv5_D:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE IOTA IN COMPLEX WITH T TEMPLATE DNA AND INCOMING DDADP organism=Homo sapiens DNA sequence DG(E865):DC(F849) DT(E866):DA(F848) DG(E867):DC(F847) DG(E868):DC(F846) DA(E869):DT(F845) DT(E870):DA(F844) DG(E871):DC(F843) DA(E872):DT(F842) DG(E873):DC(F841) ADI(D424):DT(F840) chainD ( 9) ASP34 0 0 0 0 0 0 0 0 0 2 ( 12) CYS37 0 0 0 0 0 0 0 0 0 3 ( 13) PHE38 0 0 0 0 0 0 0 0 0 1 ( 14) TYR39 0 0 0 0 0 0 0 0 1 0 ( 34) GLN59 0 0 0 0 0 0 0 0 0 3 ( 37) LEU62 0 0 0 0 0 0 0 0 0 1 ( 39) VAL64 0 0 0 0 0 0 0 0 0 2 ( 40) THR65 0 0 0 0 0 0 0 0 0 4 ( 43) TYR68 0 0 0 0 0 0 0 0 0 4 ( 46) ARG71 0 0 0 0 0 0 0 0 0 10 ( 52) LYS77 0 0 0 0 0 0 0 0 0 7 ( 53) LEU78 0 0 0 0 0 0 0 0 0 13 ( 74) LEU99 0 0 0 0 0 0 0 0 1 0 (101) ASP126 0 0 0 0 0 0 0 0 0 4 (189) LYS214 0 0 0 0 0 0 0 0 0 4 (280) GLU305 0 0 0 0 0 0 0 4 4 0 (318) ARG343 0 0 2 0 0 0 0 0 0 0 (328) ARG357 0 0 0 0 0 0 0 4 1 0 (332) GLN361 0 1 2 0 0 0 0 0 0 0 prot.sequence ssrvivhvdldcfYaqvemisnpelkdkplgvqQkyLvVtcnyearklgvkkLmnvrdakekcpqlvlvngedLtryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssgResrQcpipshviqklnydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlka >3gv7_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE IOTA IN COMPLEX WITH T TEMPLATE DNA AND INCOMING DTTP organism=Homo sapiens DNA sequence DT(T840):TTP(B421) DG(T841):DC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainB ( 9) ASP34 6 0 0 0 0 0 0 0 ( 11) ASP36 2 0 0 0 0 0 0 0 ( 12) CYS37 3 0 0 0 0 0 0 0 ( 13) PHE38 1 0 0 0 0 0 0 0 ( 14) TYR39 3 1 0 0 0 0 0 0 ( 34) GLN59 5 0 0 0 0 0 0 0 ( 39) VAL64 7 0 0 0 0 0 0 0 ( 40) THR65 4 0 0 0 0 0 0 0 ( 43) TYR68 4 0 0 0 0 0 0 0 ( 46) ARG71 10 0 0 0 0 0 0 0 ( 52) LYS77 12 0 0 0 0 0 0 0 ( 53) LEU78 12 0 0 0 0 0 0 0 (101) ASP126 6 0 0 0 0 0 0 0 (102) GLU127 1 0 0 0 0 0 0 0 (189) LYS214 4 0 0 0 0 0 0 0 (280) GLU305 0 4 3 0 0 0 0 0 (318) ARG343 0 0 0 0 0 0 1 3 (330) GLN361 0 0 0 0 0 0 0 2 prot.sequence ssrvivhvdldcfYaqvemisnpelkdkplgvqQkylvVtcnyearklgvkkLmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirrygResrQcpipshviqkdvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >3gx4_X:Methylated_DNA-protein_cysteine_methyltransferase,_C-terminal_domain; title=CRYSTAL STRUCTURE ANALYSIS OF S. POMBE ATL IN COMPLEX WITH DNA organism=Schizosaccharomyces pombe DNA sequence DT(Z215):DA(Y213) DA(Z216):DT(Y212) DC(Z217):DG(Y211) DT(Z218):DA(Y210) DA(Z219):DT(Y209) DG(Z220):DC(Y208) DC(Z222):DG(Y206) DA(Z223):DT(Y205) DT(Z224):DA(Y204) DG(Z225):DC(Y203) DG(Z226):DC(Y202) chainX ( 39) ARG39 0 0 0 0 0 30 36 0 0 0 0 ( 40) GLN40 0 0 0 0 0 0 5 1 0 0 0 prot.sequence mrmdefytkvydavceipygkvstygeiaryvgmpsyaRQvgqamkhlhpethvpwhrvinsrgtiskrdisageqrqkdrleeegveiyqtslgeyklnlpeymwkp >3gxq_A: title=STRUCTURE OF ARTA AND DNA COMPLEX organism=Staphylococcus aureus subsp. aureus USA300 DNA sequence DA(C2):DT(D12) DC(C3):DG(D11) DA(C4):DT(D10) DT(C5):DA(D9) DG(C6):DC(D8) DA(C7):DT(D7) DC(C8):DG(D6) DA(C9):DT(D5) DT(C10):DA(D4) DG(C11):DC(D3) chainA ( 12) SER18 0 0 0 0 0 2 0 0 0 0 ( 14) HIS20 0 0 0 0 0 3 13 16 0 0 ( 16) LEU22 0 0 0 0 0 0 0 0 2 1 prot.sequence nsvffgkkkkvSlHlLvdpdmkdeiikyaqekdfdnvsqagreilkkgleqia >3gxq_AB: title=STRUCTURE OF ARTA AND DNA COMPLEX organism=Staphylococcus aureus subsp. aureus USA300 DNA sequence DC(D3):DG(C11) DA(D4):DT(C10) DT(D5):DA(C9) DG(D6):DC(C8) DT(D7):DA(C7) DC(D8):DG(C6) DA(D9):DT(C5) DT(D10):DA(C4) DG(D11):DC(C3) DT(D12):DA(C2) chainA ( 12) SER18 0 0 0 0 2 0 0 0 0 0 ( 14) HIS20 0 0 16 13 3 0 0 0 0 0 ( 16) LEU22 1 2 0 0 0 0 0 0 0 0 chainB ( 15) HIS20 0 0 0 0 6 13 11 0 0 0 ( 17) LEU22 0 0 0 0 0 0 0 2 0 0 prot.sequence nsvffgkkkkvSlHlLvdpdmkdeiikyaqekdfdnvsqagreilkkgleqia/ensvffgkkkkvslHlLvdpdmkdeiikyaqekdfdnvsqagreilkkgleqia >3gyh_X:Methylated_DNA-protein_cysteine_methyltransferase,_C-terminal_domain; title=CRYSTAL STRUCTURE ANALYSIS OF S. POMBE ATL IN COMPLEX WITH DAMAGED DNA CONTAINING POB organism=Schizosaccharomyces pombe DNA sequence DC(Y202):DG(Z226) DC(Y203):DG(Z225) DA(Y204):DT(Z224) DT(Y205):DA(Z223) DG(Y206):DC(Z222) DC(Y208):DG(Z220) DT(Y209):DA(Z219) DA(Y210):DT(Z218) DG(Y211):DC(Z217) DT(Y212):DA(Z216) DA(Y213):DT(Z215) chainX ( 39) ARG39 0 0 0 0 41 33 0 0 0 0 0 ( 40) GLN40 0 0 0 0 5 0 0 0 0 0 0 prot.sequence mrmdefytkvydavceipygkvstygeiaryvgmpsyaRQvgqamkhlhpethvpwhrvinsrgtiskrdisageqrqkdrleeegveiyqtslgeyklnlpeymwkp >3gz6_A:Nudix; title=CRYSTAL STRUCTURE OF SHEWANELLA ONEIDENSIS NRTR COMPLEXED WITH A 27MER DNA organism=Shewanella oneidensis DNA sequence DG(D1):DC(C27) DT(D2):DA(C26) DA(D3):DT(C25) DA(D4):DT(C24) DT(D5):DA(C23) DA(D6):DT(C22) DG(D7):DC(C21) DT(D8):DA(C20) DG(D9):DC(C19) DT(D10):DA(C18) DC(D11):DG(C17) DT(D12):DA(C16) DT(D13):DA(C15) DT(D14):DA(C14) DA(D15):DT(C13) DA(D16):DT(C12) DG(D17):DC(C11) DA(D18):DT(C10) DC(D19):DG(C9) DA(D20):DT(C8) DC(D21):DG(C7) DT(D22):DA(C6) DA(D23):DT(C5) DT(D24):DA(C4) DT(D25):DA(C3) DA(D26):DT(C2) DC(D27):DG(C1) chainA (172) GLN189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 (174) LYS191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 17 6 0 0 0 0 0 0 0 (175) SER192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (177) ARG194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (178) ARG195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 11 3 0 0 0 0 0 0 0 0 0 (198) ARG215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 4 0 0 0 (216) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qlltvdavlftyhdqqlkvllvqrsnhpflglwglpggfidetcdesleqtvlrklaektavvppyieqlctvgnnsrdargwsvtvcytalmsyqacqiqiasvsdvkwwpladvlqmplafdhlqlieqarerltqkalyslvpgfalsepftlpelqhvhevllgkpiQgKSfRRrveqadllidtglkrtergRpanlyclkpdtasyrflRnle >3gz6_AB:Nudix; title=CRYSTAL STRUCTURE OF SHEWANELLA ONEIDENSIS NRTR COMPLEXED WITH A 27MER DNA organism=Shewanella oneidensis DNA sequence DG(D1):DC(C27) DT(D2):DA(C26) DA(D3):DT(C25) DA(D4):DT(C24) DT(D5):DA(C23) DA(D6):DT(C22) DG(D7):DC(C21) DT(D8):DA(C20) DG(D9):DC(C19) DT(D10):DA(C18) DC(D11):DG(C17) DT(D12):DA(C16) DT(D13):DA(C15) DT(D14):DA(C14) DA(D15):DT(C13) DA(D16):DT(C12) DG(D17):DC(C11) DA(D18):DT(C10) DC(D19):DG(C9) DA(D20):DT(C8) DC(D21):DG(C7) DT(D22):DA(C6) DA(D23):DT(C5) DT(D24):DA(C4) DT(D25):DA(C3) DA(D26):DT(C2) DC(D27):DG(C1) chainA (172) GLN189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 (174) LYS191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 17 6 0 0 0 0 0 0 0 (175) SER192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (177) ARG194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (178) ARG195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 11 3 0 0 0 0 0 0 0 0 0 (198) ARG215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 4 0 0 0 (216) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (172) GLN189 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) LYS191 0 0 0 0 0 0 0 4 17 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) SER192 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG194 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ARG195 0 0 0 0 0 0 0 0 0 4 11 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG215 0 0 0 6 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) PRO216 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qlltvdavlftyhdqqlkvllvqrsnhpflglwglpggfidetcdesleqtvlrklaektavvppyieqlctvgnnsrdargwsvtvcytalmsyqacqiqiasvsdvkwwpladvlqmplafdhlqlieqarerltqkalyslvpgfalsepftlpelqhvhevllgkpiQgKSfRRrveqadllidtglkrtergRpanlyclkpdtasyrflRnle/qlltvdavlftyhdqqlkvllvqrsnhpflglwglpggfidetcdesleqtvlrklaektavvppyieqlctvgnnsrdargwsvtvcytalmsyqacqiqiasvsdvkwwpladvlqmplafdhlqlieqarerltqkalyslvpgfalsepftlpelqhvhevllgkpiQgKSfRRrveqadllidtglkrtergRPanlyclkpdtasyrflRnle >3h0d_A: title=CRYSTAL STRUCTURE OF CTSR IN COMPLEX WITH A 26BP DNA DUPLEX organism=BACILLUS STEAROTHERMOPHILUS DNA sequence DA(C2):DT(D26) DT(C3):DA(D25) DT(C4):DA(D24) DA(C5):DT(D23) DA(C6):DT(D22) DG(C7):DC(D21) DG(C8):DC(D20) DT(C9):DA(D19) DC(C10):DG(D18) DA(C11):DT(D17) DA(C12):DT(D16) DA(C13):DT(D15) DT(C14):DA(D14) DA(C15):DT(D13) DT(C16):DA(D12) DA(C17):DT(D11) DG(C18):DC(D10) DT(C19):DA(D9) DC(C20):DG(D8) DA(C21):DT(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DA(C26):DT(D2) chainA ( 27) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 1 0 0 0 0 0 0 0 ( 37) VAL38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 ( 39) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 5 0 0 0 0 0 ( 40) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 ( 42) ASN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 ( 43) TYR44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 ( 61) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 8 0 0 0 0 0 0 0 0 0 prot.sequence pnisdiieqylkqvlnmsdqdiveikRseiankfrcVpSQiNYvintrftlergyiveskRggggyirimkvktkseaqlidqllelidhrisqssaedvikrlmeekvisereakmmlsvmdrsvlyidlperdelrarmlkamltslkyklei >3h0d_AB: title=CRYSTAL STRUCTURE OF CTSR IN COMPLEX WITH A 26BP DNA DUPLEX organism=BACILLUS STEAROTHERMOPHILUS DNA sequence DA(C2):DT(D26) DT(C3):DA(D25) DT(C4):DA(D24) DA(C5):DT(D23) DA(C6):DT(D22) DG(C7):DC(D21) DG(C8):DC(D20) DT(C9):DA(D19) DC(C10):DG(D18) DA(C11):DT(D17) DA(C12):DT(D16) DA(C13):DT(D15) DT(C14):DA(D14) DA(C15):DT(D13) DT(C16):DA(D12) DA(C17):DT(D11) DG(C18):DC(D10) DT(C19):DA(D9) DC(C20):DG(D8) DA(C21):DT(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DA(C26):DT(D2) chainA ( 27) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 1 0 0 0 0 0 0 0 ( 37) VAL38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 ( 39) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 5 0 0 0 0 0 ( 40) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 ( 42) ASN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 ( 43) TYR44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 ( 61) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 8 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG28 0 0 0 0 0 10 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) VAL38 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER40 0 0 0 0 0 0 0 5 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN41 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ASN43 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR44 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG62 0 0 0 3 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pnisdiieqylkqvlnmsdqdiveikRseiankfrcVpSQiNYvintrftlergyiveskRggggyirimkvktkseaqlidqllelidhrisqssaedvikrlmeekvisereakmmlsvmdrsvlyidlperdelrarmlkamltslkyklei/nisdiieqylkqvlnmsdqdiveikRseiankfrcVpSQiNYvintrftlergyiveskRggggyirimkvktkseaqlidqllelidhrisqssaedvikrlmeekvisereakmmlsvmdrsvlyidlperdelrarmlkamltslkyk >3h25_A: title=CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF PRIMASE REPB' IN COMPLEX WITH INITIATOR DNA organism=Plasmid RSF1010 DNA sequence DC(C7):DG(C27) DC(C8):DG(C26) DC(C9):DG(C25) DC(C10):DG(C24) DT(C11):DG(C23) DA(C12):DT(C22) DC(C13):DG(C21) DC(C14):DG(C20) DC(C15):DG(C19) DG(C16):DA(C18) chainA ( 32) MET35 9 0 0 0 0 0 0 0 0 0 ( 34) ARG37 7 0 0 0 0 0 0 0 0 0 ( 47) TRP50 29 0 0 0 0 0 0 0 0 0 ( 50) ARG53 5 0 0 0 0 0 0 0 0 0 ( 51) MET54 2 0 0 0 0 0 0 0 0 0 prot.sequence drtlqaigrqlkamgcerfdigvrdattgqmMnRewsaaevlqntpWlkRMnaqgndvyirpaeqerhglvlvddlsefdlddmkaegrepalvvetspknyqawvkvadaaggelrgqiartlaseydadpasadsrhygrlagftnrkdkqpwvllreskgktatagpalvqqagqqieqaqrqqe >3h3v_BC: title=YEAST RNAP II CONTAINING POLY(A)-SIGNAL SEQUENCE IN THE ACTIVE SITE organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(T10):DC(N7) DT(T11):DA(N6) DA(T12):DT(N5) DG(T13):DC(N4) DC(T14):DG(N3) DT(T15):DA(N2) DG(T16):DC(N1) chainB (1347) ARG1386 0 0 0 0 0 5 0 chainC prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3h40_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=BINARY COMPLEX OF HUMAN DNA POLYMERASE IOTA WITH TEMPLATE U/T organism=Homo sapiens DNA sequence DA(P867):DT(T847) DG(P868):DC(T846) DG(P869):DC(T845) DA(P870):DT(T844) DC(P871):DG(T843) DC(P872):DG(T842) DOC(P873):DG(T841) chainA ( 14) TYR39 0 0 0 0 0 0 1 (280) GLU305 0 0 0 0 0 3 4 (336) GLN361 2 0 0 0 0 0 0 prot.sequence ssrvivhvdldcfYaqvemisnpelkdkplgvqQkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirryssekhygresrQcpipshviqvmtpmvdilmklfrnmtllsvcfcnlk >3h4b_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF HUMAN DNA POLYMERASE IOTA WITH TEMPLATE U/T AND INCOMING DATP organism=Homo sapiens DNA sequence DA(P867):DT(T847) DG(P868):DC(T846) DG(P869):DC(T845) DA(P870):DT(T844) DC(P871):DG(T843) DC(P872):DG(T842) chainA (281) GLU305 0 0 0 0 0 2 (337) GLN361 2 0 0 0 0 0 prot.sequence assrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirryssekhygresrQcpipshviqvmtpmvdilmklfrnmtllsvcfcnlk >3h4d_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF HUMAN DNA POLYMERASE IOTA WITH TEMPLATE U/T AND INCOMING DGTP organism=Homo sapiens DNA sequence DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainA (281) GLU305 2 0 0 0 0 0 (337) GLN361 0 0 0 0 0 2 prot.sequence assrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirryssekhygresrQcpipshviqvmtpmvdilmklfrnmtllsvcfcnlk >3h8o_A:Clavaminate_synthase-like; title=STRUCTURE DETERMINATION OF DNA METHYLATION LESIONS N1-MEA AND N3-MEC IN DUPLEX DNA USING A CROSS-LINKED HOST-GUEST SYSTEM organism=Homo sapiens DNA sequence DC(C275):DG(B271) DT(C276):DC(B270) DA(C277):DG(B269) DT(C278):DT(B267) DA(C279):DA(B266) DA(C280):DT(B264) DT(C281):DA(B263) DA(C282):DT(B262) DC(C283):DG(B261) DA(C284):DT(B260) chainA ( 49) VAL101 0 0 0 0 9 0 0 0 0 0 ( 50) PHE102 0 0 0 32 13 35 0 0 0 0 prot.sequence gshswrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgkwHsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhigehrddcrelapgspiasvsfgasrdfvfrhkdsrgkspsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3h8r_A:Clavaminate_synthase-like; title=STRUCTURE DETERMINATION OF DNA METHYLATION LESIONS N1-MEA AND N3-MEC IN DUPLEX DNA USING A CROSS-LINKED HOST-GUEST SYSTEM organism=Homo sapiens DNA sequence DC(C275):DG(B271) DT(C276):DC(B270) DA(C277):DG(B269) DT(C278):DT(B267) DA(C279):DA(B266) DA(C280):DT(B264) DT(C281):DA(B263) DA(C282):DT(B262) DC(C283):DG(B261) DA(C284):DT(B260) chainA ( 47) VAL101 0 0 0 0 12 0 0 0 0 0 ( 48) PHE102 0 0 0 39 12 42 0 0 0 0 ( 50) LYS104 0 0 0 0 15 0 0 0 0 0 ( 52) HIS106 0 0 0 0 7 0 0 0 0 0 prot.sequence hswrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgKwHsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhigehrddcrelapgspiasvsfgasrdfvfrhkdsrgkspsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3h8x_A:Clavaminate_synthase-like; title=STRUCTURE DETERMINATION OF DNA METHYLATION LESIONS N1-MEA AND N3-MEC IN DUPLEX DNA USING A CROSS-LINKED HOST-GUEST SYSTEM organism=Homo sapiens DNA sequence DC(C273):DG(B271) DG(C274):DC(B270) DC(C275):DG(B269) DA(C276):DT(B268) DA(C277):DT(B267) DT(C278):DA(B266) DA(C279):DT(B264) DA(C280):DT(B262) DG(C281):DG(B261) DA(C282):DT(B260) DC(C283):DC(B259) chainA ( 47) VAL101 0 0 0 0 0 12 0 0 0 0 0 ( 48) PHE102 0 0 0 0 0 48 44 0 0 0 0 prot.sequence hswrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgkwHsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhigehrddcrelapgspiasvsfgasrdfvfrhkdsrgkspsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3hdd_A:Homeodomain-like; title=ENGRAILED HOMEODOMAIN DNA COMPLEX organism=Drosophila melanogaster DNA sequence DT(C202):DA(D342) DT(C203):DA(D341) DT(C204):DA(D340) DG(C205):DC(D339) DC(C206):DG(D338) DC(C207):DG(D337) DA(C208):DT(D336) DT(C209):DA(D335) DG(C210):DC(D334) DT(C211):DA(D333) DA(C212):DT(D332) DA(C213):DT(D331) DT(C214):DA(D330) DT(C215):DA(D329) DA(C216):DT(D328) DC(C217):DG(D327) DC(C218):DG(D326) DT(C219):DA(D325) DA(C220):DT(D324) DA(C221):DT(D323) chainA ( 1) ARG5 0 0 0 0 0 0 0 0 7 11 8 0 0 0 0 0 0 0 0 0 ( 43) ILE47 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 46) GLN50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 47) ASN51 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 prot.sequence RtafsseqlarlkrefnenrylterrrqqlsselglneaqiKIwfQNkrakikks >3hdd_AB:Homeodomain-like; title=ENGRAILED HOMEODOMAIN DNA COMPLEX organism=Drosophila melanogaster DNA sequence DT(C202):DA(D342) DT(C203):DA(D341) DT(C204):DA(D340) DG(C205):DC(D339) DC(C206):DG(D338) DC(C207):DG(D337) DA(C208):DT(D336) DT(C209):DA(D335) DG(C210):DC(D334) DT(C211):DA(D333) DA(C212):DT(D332) DA(C213):DT(D331) DT(C214):DA(D330) DT(C215):DA(D329) DA(C216):DT(D328) DC(C217):DG(D327) DC(C218):DG(D326) DT(C219):DA(D325) DA(C220):DT(D324) DA(C221):DT(D323) chainA ( 1) ARG5 0 0 0 0 0 0 0 0 7 11 8 0 0 0 0 0 0 0 0 0 ( 43) ILE47 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 46) GLN50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 47) ASN51 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 chainB ( 45) ILE47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 48) GLN50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 ( 55) LYS57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence RtafsseqlarlkrefnenrylterrrqqlsselglneaqiKIwfQNkrakikks/rprtafsseqlarlkrefnenrylterrrqqlsselglneaqikIwfQNkrakiKk >3hjf_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE E546 MUTANT PROTEIN COMPLEXED WITH DNA GUIDE STRAND AND 15-NT RNA TARGET STRAND organism=THERMUS THERMOPHILUS DNA sequence DT(X1) DG(X2) DA(X3) DG(X4) DG(X5) DT(X6) DA(X7) DG(X8) DT(X9) DA(X10) DG(X11) DG(X12) DT(X13) DT(X14) DG(X15) DT(X16) DA(X17) chainA ( 38) GLU40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 41) TYR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 ( 42) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (396) PRO412 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) MET413 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) TRP415 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (402) ARG418 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) ILE434 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) ASN436 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) HIS445 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (430) ARG446 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (433) ASN449 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (627) PHE647 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hlgktevflnrfalrplnpeelrpwrlevvldpppgrEevYPllaqvarraggvtvrmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpkeglslldyhaskgrlqgreggrvawvadpkdprkpiphltgllvpvltledlslpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltpPMaWedRnrlkalllreglpsqIlNvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavggdgghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllregrvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvrgtprplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >3hm9_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE COMPLEXED WITH DNA GUIDE STRAND AND 19-NT RNA TARGET STRAND organism=THERMUS THERMOPHILUS DNA sequence DT(X1) DG(X2) DA(X3) DG(X4) DG(X5) DT(X6) DA(X7) DG(X8) DT(X9) DA(X10) DG(X11) DG(X12) DT(X13) DT(X14) DG(X15) DT(X16) chainA ( 41) TYR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (388) MET413 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (390) TRP415 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ARG418 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (409) ILE434 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ASN436 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) HIS445 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) ARG446 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) ASN449 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (616) PHE647 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hlgktevflnrfalrplnpeelrpwrlevvldpppgreevYpllaqvarraggvtvrmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpkelslldyhaskgrlqgreggrvawvadpiphltgllvpvltllslpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppMaWedRnrlkalllreglpsqIlNvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavggdghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrdgrvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvgtprplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >3ho1_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE N546 MUTANT PROTEIN COMPLEXED WITH DNA GUIDE STRAND AND 12-NT RNA TARGET STRAND organism=THERMUS THERMOPHILUS DNA sequence DT(X1) DG(X2) DA(X3) DG(X4) DG(X5) DT(X6) DA(X7) DG(X8) DT(X9) DA(X10) DG(X11) DG(X12) DA(X19) DG(X20) DT(X21) chainA (219) TYR226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (242) LYS252 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (244) ILE254 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 (257) LEU267 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 (403) MET413 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (405) TRP415 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (408) ARG418 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) ILE434 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) ASN436 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (435) HIS445 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (436) ARG446 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) ASN449 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (536) ARG548 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (603) ARG615 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 (635) PHE647 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nhlgktevflnrfalrplnpeelrpwrlevvldpppgreevypllaqvarraggvtvrmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpkelslldYhaskgrlqgreggrvawvadpkKpIphltgllvpvltLedlheeegslalslpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppMaWedRnrlkalllreglpsqIlNvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavggghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrngRvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrdfrgtpRplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >3hos_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE MARINER MOS1 PAIRED END COMPLEX WITH MG organism=DROSOPHILA MAURITIANA DNA sequence DG(E4):DC(F53) DG(E5):DC(F52) DT(E6):DA(F51) DG(E7):DC(F50) DT(E8):DA(F49) DA(E9):DT(F48) DC(E10):DG(F47) DA(E11):DT(F46) DA(E12):DT(F45) DG(E13):DC(F44) DT(E14):DA(F43) DA(E15):DT(F42) DT(E16):DA(F41) DG(E17):DC(F40) DA(E18):DT(F39) DA(E19):DT(F38) DA(E20):DT(F37) DT(E21):DA(F36) DG(E22):DC(F35) DT(E23):DA(F34) DC(E24):DG(F33) DG(E25):DC(F32) DT(E26):DA(F31) DT(E27):DA(F30) DT(E28):DA(F29) chainB ( 40) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 3 0 0 0 ( 43) GLU47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 ( 44) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 12 1 0 0 0 0 0 ( 61) HIS65 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 ( 63) LYS67 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO68 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) SER99 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) GLN100 0 0 0 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) GLN101 0 0 0 0 0 6 7 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) ALA102 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) SER104 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vpnkeqtrtvlifcfhlkktaaeshrmlveafgeqvptvKtcERwfqrfksgdfdvddkeHgKPpkryedaelqalldeddaqtqkqlaeqlevSQQAvSnrlremgkiqkvgrwvphelnerqmerrkntceillsrykrksflhrivtgdekwiffvnpkrkksyvdpgqpatstarpnrfgkktmlcvwwdqsgviyyellkpgetvnaaryqqqlinlnralqrkrpeyqrviflhdnapshtaravrdtletlnwevlphaayspdlapsdyhlfasmghalaeqrfdsyesvkkwldewfaakddefywrgihklperwekcvasdgkyfe >3hot_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE MOS1 MARINER PAIRED END COMPLEX WITH MN organism=DROSOPHILA MAURITIANA DNA sequence DA(D29):DT(C28) DA(D30):DT(C27) DA(D31):DT(C26) DC(D32):DG(C25) DG(D33):DC(C24) DA(D34):DT(C23) DC(D35):DG(C22) DA(D36):DT(C21) DT(D37):DA(C20) DT(D38):DA(C19) DT(D39):DA(C18) DC(D40):DG(C17) DA(D41):5IU(C16) DT(D42):DA(C15) DA(D43):DT(C14) DC(D44):DG(C13) DT(D45):DA(C12) DT(D46):DA(C11) DG(D47):DC(C10) DT(D48):DA(C9) DA(D49):DT(C8) DC(D50):DG(C7) DA(D51):DT(C6) DC(D52):DG(C5) DC(D53):DG(C4) chainA ( 38) THR42 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LYS44 0 0 0 5 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLU47 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG48 0 0 0 0 0 1 9 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) HIS65 0 0 0 0 0 0 0 0 0 4 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO68 0 0 0 0 0 0 0 0 0 0 0 0 3 7 1 0 0 0 0 0 0 0 0 0 0 ( 95) SER99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 96) GLN100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 ( 97) GLN101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 21 14 10 0 0 0 0 0 ( 98) ALA102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (100) SER104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 prot.sequence vpnkeqtrtvlifcfhlkktaaeshrmlveafgeqvpTvKtcERwfqrfksgdfdvddkeHgkPpkryedaelqalldeddaqtqkqlaeqlevSQQAvSnrlremgkiqkvgrwvphelnerqmerrkntceillsrykrksflhrivtgdekwiffvnpkrkksyvdpgqpatstarpnrfgkktmlcvwwdqsgviyyellkpgetvnaaryqqqlinlnralqrkrpeyqhrviflhdnapshtaravrdtletlnwevlphaayspdlapsdyhlfasmghalaeqrfdsyesvkkwldewfaakddefywrgihklperwekcvasdgkyfe >3hou_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX I WITH A T-U MISMATCH organism=? DNA sequence DA(111):DT(26) DG(112):DC(25) DT(113):DA(24) DA(114):DT(23) DG(115):DC(22) DT(116):DA(21) chainA (1347) ARG1386 0 0 0 0 1 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvraeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >3hou_AB: title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX I WITH A T-U MISMATCH organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(111):DT(26) DG(112):DC(25) DT(113):DA(24) DA(114):DT(23) DG(115):DC(22) DT(116):DA(21) chainA (1347) ARG1386 0 0 0 0 1 0 chainB prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvraeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkamssragvsqvlnrytysstlshlrrtntpilakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3hou_MN: title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX I WITH A T-U MISMATCH organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(411):DT(56) DG(412):DC(55) DT(413):DA(54) DA(414):DT(53) DG(415):DC(52) DT(416):DA(51) chainM (1347) ARG1386 0 0 0 0 1 0 chainN prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvraeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkamssragvsqvlnrytysstlshlrrtntpilakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3hov_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX II organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(T12):DC(N5) DT(T13):DA(N4) DA(T14):DT(N3) DG(T15):DC(N2) DT(T16):DA(N1) chainA (1347) ARG1386 0 0 0 1 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvraeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >3hov_AB: title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX II organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N1):DT(T16) DC(N2):DG(T15) DT(N3):DA(T14) DA(N4):DT(T13) DC(N5):DG(T12) chainA (1347) ARG1386 0 1 0 0 0 chainB prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvraeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkamssragvsqvlnrytysstlshlrrtntpilakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3how_AB: title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX III WITH A T-U MISMATCH AND A FRAYED RNA 3'-URIDINE organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(110):DT(27) DA(111):DT(26) DG(112):DC(25) DT(113):DA(24) DA(114):DT(23) DG(115):DC(22) DT(116):DA(21) chainA (1347) ARG1386 0 0 0 0 0 6 0 chainB (420) ARG504 0 0 0 0 7 14 9 (421) ASP505 0 0 0 0 0 2 12 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvraeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkamssragvsqvlnrytysstlshlrrtntpigRDgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3how_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX III WITH A T-U MISMATCH AND A FRAYED RNA 3'-URIDINE organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(21):DT(116) DC(22):DG(115) DT(23):DA(114) DA(24):DT(113) DC(25):DG(112) DT(26):DA(111) DT(27):DA(110) chainB (420) ARG504 9 14 7 0 0 0 0 (421) ASP505 12 2 0 0 0 0 0 prot.sequence desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkamssragvsqvlnrytysstlshlrrtntpigRDgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3hox_AB: title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX V organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N1):DT(T16) DC(N2):DG(T15) DT(N3):DA(T14) DA(N4):DT(T13) DC(N5):DG(T12) DT(N6):DA(T11) DT(N7):DA(T10) chainA (1348) ARG1386 0 5 0 0 0 0 0 chainB (421) ARG504 11 8 0 0 0 0 0 (422) ASP505 12 3 0 0 0 0 0 (424) LYS507 5 0 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpeaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigRDgKlakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3hox_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX V organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T10):DT(N7) DA(T11):DT(N6) DG(T12):DC(N5) DT(T13):DA(N4) DA(T14):DT(N3) DG(T15):DC(N2) DT(T16):DA(N1) chainB (421) ARG504 0 0 0 0 0 8 11 (422) ASP505 0 0 0 0 0 3 12 (424) LYS507 0 0 0 0 0 0 5 prot.sequence desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigRDgKlakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3hoy_AB: title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX VI organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(T10):DA(N7) DA(T11):DT(N6) DC(T12):DG(N5) DT(T13):DA(N4) DT(T14):DA(N3) DA(T15):DA(N2) DC(T16):DG(N1) chainA (1350) ARG1386 0 0 0 0 0 7 0 chainB (414) ASP505 0 0 0 0 0 0 19 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvraeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgagvsqvlnrytysstlshlrrtntpigrDgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3hoy_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX VI organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(N1):DC(T16) DA(N2):DA(T15) DA(N3):DT(T14) DA(N4):DT(T13) DG(N5):DC(T12) DT(N6):DA(T11) DA(N7):DT(T10) chainB (414) ASP505 19 0 0 0 0 0 0 prot.sequence desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgagvsqvlnrytysstlshlrrtntpigrDgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3hoz_AB: title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX IV WITH A T-U MISMATCH AND A FRAYED RNA 3'-GUANINE organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T10):DT(N7) DA(T11):DT(N6) DG(T12):DC(N5) DT(T13):DA(N4) DA(T14):DT(N3) DG(T15):DC(N2) DT(T16):DA(N1) chainA (1349) ARG1386 0 0 0 0 1 6 0 chainB (420) ARG504 0 0 0 0 7 8 7 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkmssragvsqvlnrytysstlshlrrtntpigRlakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3hoz_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=COMPLETE RNA POLYMERASE II ELONGATION COMPLEX IV WITH A T-U MISMATCH AND A FRAYED RNA 3'-GUANINE organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N1):DT(T16) DC(N2):DG(T15) DT(N3):DA(T14) DA(N4):DT(T13) DC(N5):DG(T12) DT(N6):DA(T11) DT(N7):DA(T10) chainB (420) ARG504 7 8 7 0 0 0 0 prot.sequence desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkmssragvsqvlnrytysstlshlrrtntpigRlakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3hp6_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS F710Y MUTANT BOUND TO G:T MISMATCH organism=Geobacillus stearothermophilus DNA sequence DC(B21):DG(C12) DG(B22):DC(C11) DA(B23):DT(C10) DT(B24):DA(C9) DC(B25):DG(C8) DA(B26):DT(C7) DC(B27):DG(C6) DG(B28):DC(C5) chainA (285) LYS582 0 0 0 0 3 4 0 0 (290) TYR587 0 0 0 0 0 0 1 0 (318) ARG615 0 0 0 0 0 0 0 4 (325) ASN622 0 0 0 0 0 1 1 0 (328) ASN625 0 0 0 0 0 1 7 1 (332) ARG629 0 0 0 0 0 0 0 2 (500) GLN797 0 0 0 0 0 0 0 1 (532) HIS829 0 0 0 0 0 0 0 2 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3hpo_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS Y714S MUTANT BOUND TO G:T MISMATCH organism=Geobacillus stearothermophilus DNA sequence DC(B21):DG(C12) DG(B22):DC(C11) DA(B23):DT(C10) DT(B24):DA(C9) DC(B25):DG(C8) DA(B26):DT(C7) DC(B27):DG(C6) DG(B28):DC(C5) DOC(B29):DG(C4) TTP(A201):DG(C3) chainA (285) LYS582 0 0 0 0 2 5 0 0 0 0 (318) ARG615 0 0 0 0 0 0 0 4 10 0 (325) ASN622 0 0 0 0 0 0 1 0 0 0 (328) ASN625 0 0 0 0 0 1 7 1 0 0 (332) ARG629 0 0 0 0 0 0 0 6 5 3 (359) GLN656 0 0 0 0 0 0 0 0 0 18 (385) HIS682 0 0 0 0 0 0 0 0 0 8 (405) ARG702 0 0 0 0 0 0 0 0 0 7 (409) LYS706 0 0 0 0 0 0 0 0 0 11 (413) PHE710 0 0 0 0 0 0 0 0 0 34 (417) SER714 0 0 0 0 0 0 0 0 0 7 (419) ILE716 0 0 0 0 0 0 0 0 0 3 (427) ASN724 0 0 0 0 0 0 0 0 0 1 (496) ASN793 0 0 0 0 0 0 0 0 0 1 (500) GLN797 0 0 0 0 0 0 0 1 4 0 (532) HIS829 0 0 0 0 0 0 0 2 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhaapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivSgIsdyglaqNlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3hqf_A:DNA-binding_pseudobarrel_domain; title=CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE ECORII N-TERMINAL EFFECTOR-BINDING DOMAIN IN COMPLEX WITH COGNATE DNA organism=Escherichia coli DNA sequence DG(B-4):DC(C4) DC(B-3):DG(C3) DC(B-2):DG(C2) DC(B-1):DG(C1) DT(B0):DA(C0) DG(B1):DC(C-1) DG(B2):DC(C-2) DC(B3):DG(C-3) DG(B4):DC(C-4) chainA ( 29) ASN28 0 0 0 0 8 12 0 0 0 ( 37) HIS36 0 10 16 20 0 0 0 0 0 ( 38) GLN37 0 0 0 0 8 2 0 0 0 ( 39) VAL38 0 6 0 0 0 0 0 0 0 ( 42) TYR41 0 0 0 0 0 0 2 11 0 ( 86) TYR85 0 0 0 7 7 0 0 0 0 ( 94) THR93 0 0 0 0 0 1 0 0 0 ( 95) ARG94 0 0 0 0 6 23 14 0 0 ( 97) GLU96 0 0 0 0 0 0 6 0 0 ( 99) ARG98 0 0 0 3 10 0 0 0 0 prot.sequence hhgssvfhnwlleiacenyfvyikrlsaNdtgatggHQVglYipsgiveklfpsinhtrelnpsvfltahvsshdcpdsearaiyYnsrhfgkTRnEkRitrwgrgsplqdpentgaltllafkldeqggdckevniwvcastdeedvietaigevipgalisgpagqilggl >3hqg_A:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE ECORII CATALYTIC C- TERMINAL DOMAIN IN COMPLEX WITH COGNATE DNA organism=Escherichia coli DNA sequence DT(B-6) DC(B-5) DG(B-4) DA(B-3) DC(B-2) DC(B-1) DA(B0) DG(B1) DG(B2) DC(B3) DT(B4) DA(B5) chainA ( 40) ARG222 0 0 0 0 0 0 8 0 0 0 0 0 ( 43) GLU225 0 0 0 0 0 0 5 0 0 0 0 0 ( 44) TYR226 0 0 0 0 0 0 28 0 0 0 0 0 ( 47) PHE229 0 0 0 0 0 0 15 0 0 0 0 0 ( 80) ARG262 0 0 0 0 0 0 2 0 0 0 0 0 ( 81) LYS263 0 0 0 0 0 7 0 5 0 0 0 0 ( 82) SER264 0 0 0 0 2 0 0 0 0 0 0 0 ( 83) ARG265 0 0 0 0 0 0 2 0 0 0 0 0 ( 84) ALA266 0 0 0 0 0 0 6 0 0 0 0 0 ( 87) SER269 0 0 0 0 0 0 2 0 0 0 0 0 (146) LYS328 0 0 0 0 0 0 0 12 9 0 0 0 (147) ASP329 0 0 0 0 0 0 0 1 0 0 0 0 (148) ARG330 0 0 0 0 0 12 0 14 0 0 0 0 prot.sequence yilpedwhlrfpsgseiiqyaashyvknsldpdeqlldrRrvEYdiFllveelhvldiirkgfgsvdefialansvsnrRKSRAgkSlelhlehlfiehglrhfatqaitegnkkpdflfpsagayhdtefpvenlrmlavkttcKDRwrqilneadkihqvhlftlqegvslaqyremresgvrlvvpsslhkkypeavraelmtlgafiaeltglyadip >3ht3_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS V713P MUTANT BOUND TO G:DCTP organism=Geobacillus stearothermophilus DNA sequence DC(B21):DG(C12) DG(B22):DC(C11) DA(B23):DT(C10) DT(B24):DA(C9) DC(B25):DG(C8) DA(B26):DT(C7) DC(B27):DG(C6) DG(B28):DC(C5) chainA (285) LYS582 0 0 0 0 3 4 0 0 (290) TYR587 0 0 0 0 0 0 1 0 (318) ARG615 0 0 0 0 0 0 0 4 (325) ASN622 0 0 0 0 0 0 1 0 (328) ASN625 0 0 0 0 0 1 7 1 (500) GLN797 0 0 0 0 0 0 0 1 (532) HIS829 0 0 0 0 0 0 0 2 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgipygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3hts_B:"Winged_helix"_DNA-binding_domain; title=HEAT SHOCK TRANSCRIPTION FACTOR/DNA COMPLEX organism=Kluyveromyces lactis DNA sequence DG(A1) DG(A2) DT(A3) DT(A4) DC(A5) DT(A6) DA(A7) DG(A8) DA(A9) DA(A10) DC(A11) DC(A12) chainB ( 56) SER247 0 0 0 6 0 0 0 0 0 0 0 0 ( 59) ARG250 0 0 0 7 2 0 0 0 0 0 0 0 ( 60) GLN251 0 0 4 3 0 0 0 0 0 0 0 0 ( 63) MET254 0 0 3 1 0 0 0 0 0 0 0 0 prot.sequence marpafvnklwsmvndksnekfihwstsgesivvpnrerfvqevlpkyfkhsnfaSfvRQlnMygwhkvqnndsrwefener >3hxm_A:Ribonuclease_H-like; title=STRUCTURE OF AN ARGONAUTE COMPLEXED WITH GUIDE DNA AND TARGET RNA DUPLEX CONTAINING TWO MISMATCHES. organism=THERMUS THERMOPHILUS DNA sequence DT(C1) DG(C2) DA(C3) DG(C4) DG(C5) DT(C6) DA(C7) DG(C8) DT(C9) DA(C10) DG(C11) DG(C20) DT(C21) chainA (213) TYR226 0 0 0 0 0 0 0 0 0 0 0 0 17 (366) MET413 4 0 0 0 0 0 0 0 0 0 0 0 0 (368) TRP415 2 0 0 0 0 0 0 0 0 0 0 0 0 (371) ARG418 10 0 0 0 0 0 0 0 0 0 0 0 0 (387) ILE434 3 0 0 0 0 0 0 0 0 0 0 0 0 (389) ASN436 7 0 0 0 0 0 0 0 0 0 0 0 0 (398) HIS445 0 3 0 0 0 0 0 0 0 0 0 0 0 (399) ARG446 0 11 0 0 0 0 0 0 0 0 0 0 0 (402) ASN449 0 10 1 0 0 0 0 0 0 0 0 0 0 (567) ARG615 0 0 0 0 0 3 7 0 0 0 0 0 0 (599) PHE647 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gktevflnrfalrplnpeelrpwrlevvldpppgreevypllaqvarraggvtvrmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpslldYhaskgrvpvltledlhealslpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppMaWedRnrlkalllreglpsqIlNvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavgggghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrdgrvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrdfrgtpRplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >3hxo_A:vWA-like; title=CRYSTAL STRUCTURE OF VON WILLEBRAND FACTOR (VWF) A1 DOMAIN IN COMPLEX WITH DNA APTAMER ARC1172, AN INHIBITOR OF VWF-PLATELET BINDING organism=Homo sapiens DNA sequence DG(B1) DG(B2):DC(B40) DC(B3):DG(B39) DG(B4):DC(B38) DT(B5):DA(B37) DG(B6):DC(B36) DC(B7)xDT(B22) DA(B8):DG(B21) DG(B9):DC(B20) DT(B10) DG(B11):DC(B19) DC(B12):DG(B18) DC(B13):DG(B17) DT(B14) DT(B15) DC(B16) DG(B23):DT(B35) DC(B24):DG(B34) DG(B25):DC(B33) DG(B26):DC(B32) DT(B27)xDT(B31) DG(B28):DC(B30) DC(B29) chainA ( 18) ARG524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 97) PHE603 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) GLN625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 15 (121) PRO627 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 (122) GLN628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 16 19 0 (123) ARG629 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 23 14 6 0 0 0 (125) SER631 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (126) ARG632 0 0 0 0 0 0 11 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) ASN633 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) PHE634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (129) VAL635 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (152) ASN658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 (153) LEU659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (154) LYS660 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 1 2 (158) LEU664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence fycsrlldlvflldgssRlseaefevlkafvvdmmerlrisqkwvrvavveyhdgshayiglkdrkrpselrriasqvkyagsqvastsevlkytlFqifskidrpeasrialllmasQePQRmSRNFVryvqglkkkkvivipvgigphaNLKqirLiekqapenkafvlssvdeleqqrdeivsylcdlapeapppt >3hxq_A:vWA-like; title=CRYSTAL STRUCTURE OF VON WILLEBRAND FACTOR (VWF) A1 DOMAIN IN COMPLEX WITH DNA APTAMER ARC1172, AN INHIBITOR OF VWF-PLATELET BINDING organism=Homo sapiens DNA sequence DG(B1):DC(B41) DG(B2):DC(B40) DC(B3):DG(B39) DG(B4):DC(B38) DT(B5):DA(B37) DG(B6):DC(B36) DC(B7)xDT(B22) DA(B8):DG(B21) DG(B9):DC(B20) DT(B10) DG(B11):DC(B19) DC(B12):DG(B18) DC(B13):DG(B17) DT(B14) DT(B15) DC(B16) DG(B23):DT(B35) DC(B24):DG(B34) DG(B25):DC(B33) DG(B26):DC(B32) DT(B27)xDT(B31) DG(B28):DC(B30) DC(B29) chainA ( 23) ARG524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (102) PHE603 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) GLN625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 16 (126) PRO627 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 (127) GLN628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 17 29 0 (128) ARG629 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 21 10 7 0 0 0 (130) SER631 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 (131) ARG632 0 0 0 0 0 0 8 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) ASN633 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) PHE634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (157) ASN658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (158) LEU659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (159) LYS660 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 1 (163) LEU664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence pplhdfycsrlldlvflldgssRlseaefevlkafvvdmmerlrisqkwvrvavveyhdgshayiglkdrkrpselrriasqvkyagsqvastsevlkytlFqifskidrpeasrialllmasQePQRmSRNFvryvqglkkkkvivipvgigphaNLKqirLiekqapenkafvlssvdeleqqrdeivsylcdlapeap >3hzi_AB:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF MDT PROTEIN organism=ESCHERICHIA COLI DNA sequence DA(T699) DC(T700) DT(T701) DA(T702) DT(T703) DC(T704) DC(T705) DC(T706) DC(T707) DT(T708) DT(T709) DA(T710) DA(T711) DG(T712) DG(T713) DG(T714) DG(T715) DA(T716) DT(T717) DA(T718) DG(T719) chainA chainB ( 25) GLN28 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) SER29 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pklvtwmnnqrvgeltklangahtfkyapewlasryarplslslplqrgnitsdavfnffdnllpdspivrdrivkryhaksrqpfdllseigrdsvgavtlipedetvthpimawekltearleevltaykadiplgmiredfrisvagaqektallrigndwcipkgitptthiiklpilsqsvdneyyclllakelglnvpdaeiikagnvralaverfdrrwnarrtvllrlpqedmcqtfglpssvkyesdggpgiarimaflmgssealkdrydfmkfqvfqwligatqghaknfsvfiqaggsyrltpfydiisafpvlggtgihisdlklamglnaskgkktaidkiyprhflatakvlrfpevqmheilsdfarmipaaldnvktslptdfpenvvtavesnvlrlhgrlsrey/fqkiysptqlanamklvrqqngwtQSelakkigikQAtiSnfennpdnttlttffkilqslelsmtlcdak >3i0w_A:DNA-glycosylase; title=CRYSTAL STRUCTURE OF CLOSTRIDIUM ACETOBUTYLICUM 8-OXOGUANINE GLYCOSYLASE/LYASE IN COMPLEX WITH DSDNA CONTAINING CYTOSINE OPPOSITE TO 8-OXOG organism=CLOSTRIDIUM ACETOBUTYLICUM DNA sequence DT(B15):DA(C13) DC(B16):DG(C12) DC(B17):DG(C11) DA(B18):DT(C10) 8OG(B19):DC(C9) DG(B20):DC(C8) DT(B21):DA(C7) DC(B22):DG(C6) DT(B23):DA(C5) DA(B24):DT(C4) DC(B25):DG(C3) DC(B26):DG(C2) chainA ( 33) PHE33 0 0 0 0 4 0 0 0 0 0 0 0 (122) PHE122 0 0 0 0 3 0 0 0 0 0 0 0 (125) SER125 0 0 0 0 1 0 0 0 0 0 0 0 (127) ASN127 0 0 0 26 5 31 0 0 0 0 0 0 (129) ARG129 0 0 7 20 0 0 0 0 0 0 0 0 (130) ILE130 0 0 0 0 4 0 0 0 0 0 0 0 (133) ILE133 0 0 0 0 1 0 0 0 0 0 0 0 (179) PHE179 0 0 0 0 15 10 0 0 0 0 0 0 (180) ARG180 0 0 0 0 11 0 0 0 0 0 0 0 (222) GLN222 0 0 0 0 10 0 0 0 0 0 0 0 (226) CYS226 0 0 0 0 5 0 0 0 0 0 0 0 (230) PHE230 0 0 0 0 5 0 0 0 0 0 0 0 (239) PRO239 0 0 0 0 4 0 0 0 0 0 0 0 (241) ASP241 0 0 0 0 16 0 0 0 0 0 0 0 (244) VAL244 0 0 0 0 1 0 0 0 0 0 0 0 (278) GLN278 0 0 0 0 9 0 0 0 0 0 0 0 (279) GLN279 0 0 0 0 5 0 0 0 0 0 0 0 (282) PHE282 0 0 0 0 34 0 0 0 0 0 0 0 prot.sequence mdfdmieekkdsvivrnvenfelkdifdcgqcfrwhrqengnyigiafekvvevqkigedvviynineeefknvwseyfdlyrdygeikkelsrdpllkksvdfgegirilrqdpfeillsfiisaNNRipmikkcinnisekagkkleykgkiyyafptvdklheftekdfeectagFRakYlkdtvdriyngelnleyikslndnecheelkkfmgvgpqvadcimlfsmqkysafpvdtwvkkammslyvapdvslkkirdfgrekfgslsgfaqqylfyyarenni >3i0x_A:DNA-glycosylase; title=CRYSTAL STRUCTURE OF CLOSTRIDIUM ACETOBUTYLICUM 8-OXOGUANINE GLYCOSYLASE/LYASE IN COMPLEX WITH DSDNA CONTAINING ADENINE OPPOSITE TO 8-OXOG organism=CLOSTRIDIUM ACETOBUTYLICUM DNA sequence DG(D2):DC(C26) DG(D3):DC(C25) DT(D4):DA(C24) DA(D5):DT(C23) DG(D6):DC(C22) DA(D7):DT(C21) DC(D8):DG(C20) DA(D9):8OG(C19) DT(D10):DA(C18) DG(D11):DC(C17) DG(D12):DC(C16) DA(D13):DT(C15) chainA ( 31) GLN31 0 0 0 0 0 0 0 1 0 0 0 0 ( 33) PHE33 0 0 0 0 0 0 0 4 0 0 0 0 (122) PHE122 0 0 0 0 0 0 0 3 0 0 0 0 (125) SER125 0 0 0 0 0 0 0 1 0 0 0 0 (126) ALA126 0 0 0 0 0 0 2 0 0 0 0 0 (127) ASN127 0 0 0 0 0 0 54 5 16 0 0 0 (129) ARG129 0 0 0 0 0 0 0 0 9 9 8 0 (130) ILE130 0 0 0 0 0 0 0 3 0 0 0 0 (132) MET132 0 0 0 0 0 0 0 0 4 1 0 0 (133) ILE133 0 0 0 0 0 0 0 1 0 0 0 0 (179) PHE179 0 0 0 0 0 0 22 13 0 0 0 0 (180) ARG180 0 0 0 0 0 0 0 5 0 0 0 0 (222) GLN222 0 0 0 0 0 0 0 6 0 0 0 0 (226) CYS226 0 0 0 0 0 0 0 5 0 0 0 0 (230) PHE230 0 0 0 0 0 0 0 6 0 0 0 0 (239) PRO239 0 0 0 0 0 0 0 4 0 0 0 0 (241) ASP241 0 0 0 0 0 0 0 15 0 0 0 0 (244) VAL244 0 0 0 0 0 0 0 1 0 0 0 0 (278) GLN278 0 0 0 0 0 0 0 9 0 0 0 0 (279) GLN279 0 0 0 0 0 0 0 5 0 0 0 0 (282) PHE282 0 0 0 0 0 0 0 36 0 0 0 0 prot.sequence mdfdmieekkdsvivrnvenfelkdifdcgqcfrwhrqengnyigiafekvvevqkigedvviynineeefknvwseyfdlyrdygeikkelsrdpllkksvdfgegirilrqdpfeillsfiisANNRipMikkcinnisekagkkleykgkiyyafptvdklheftekdfeectagFRakYlkdtvdriyngelnleyikslndnecheelkkfmgvgpqvadcimlfsmqkysafpvdtwvkkammslyvapdvslkkirdfgrekfgslsgfaqqylfyyarenniq >3i4m_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=8-OXOGUANINE CONTAINING RNA POLYMERASE II ELONGATION COMPLEX D organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T7):DG(N10) DT(T8):DA(N9) DC(T9):DG(N8) DA(T10):DT(N7) DA(T11):DT(N6) DG(T12):DC(N5) DT(T13):DA(N4) DA(T14):DT(N3) DC(T15):DG(N2) DT(T16):DA(N1) chainA (1360) ARG1386 0 0 0 0 0 0 0 0 1 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpkaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >3i4m_AB: title=8-OXOGUANINE CONTAINING RNA POLYMERASE II ELONGATION COMPLEX D organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N1):DT(T16) DG(N2):DC(T15) DT(N3):DA(T14) DA(N4):DT(T13) DC(N5):DG(T12) DT(N6):DA(T11) DT(N7):DA(T10) DG(N8):DC(T9) DA(N9):DT(T8) DG(N10):DC(T7) chainA (1360) ARG1386 0 1 0 0 0 0 0 0 0 0 chainB (433) ARG504 3 0 0 0 0 0 0 0 0 0 (434) ASP505 13 0 0 0 0 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpkaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyekvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigRDgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3i4n_AB: title=8-OXOGUANINE CONTAINING RNA POLYMERASE II ELONGATION COMPLEX E organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T7):DG(N10) DT(T8):DA(N9) DC(T9):DG(N8) DA(T10):DT(N7) DA(T11):DT(N6) DG(T12):DC(N5) DT(T13):DA(N4) DA(T14):DT(N3) DC(T15):DG(N2) DT(T16):DA(N1) chainA (1360) ARG1386 0 0 0 0 0 0 0 0 3 1 chainB (434) ASP505 0 0 0 0 0 0 0 0 0 23 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpkaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyekvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrDgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3i4n_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=8-OXOGUANINE CONTAINING RNA POLYMERASE II ELONGATION COMPLEX E organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N1):DT(T16) DG(N2):DC(T15) DT(N3):DA(T14) DA(N4):DT(T13) DC(N5):DG(T12) DT(N6):DA(T11) DT(N7):DA(T10) DG(N8):DC(T9) DA(N9):DT(T8) DG(N10):DC(T7) chainB (434) ASP505 23 0 0 0 0 0 0 0 0 0 prot.sequence desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyekvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrDgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3i8d_A:Ribonuclease_H-like; title=THE PAIRING GEOMETRY OF THE HYDROPHOBIC THYMINE ANALOG 2,4- DIFLUOROTOLUENE IN DUPLEX DNA AS ANALYZED BY X-RAY CRYSTALLOGRAPHY organism=Bacillus halodurans DNA sequence DC(B1) DG(B2) DC(B3) DG(B4) DA(B5) DA(B6) DT(B7) DC(B9) DG(B10) DC(B11) DG(B12) chainA ( 13) SER74 0 0 0 0 0 0 0 0 0 0 1 ( 14) GLN75 0 0 0 0 0 0 0 0 0 0 3 ( 16) ASN77 0 0 0 0 0 0 0 0 0 0 1 ( 44) ASN105 0 0 0 0 0 0 0 0 1 1 0 prot.sequence eiiweslsvdvgSQgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsqtaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikady >3iag_C:DNA-binding_protein_LAG-1_CSL;p53-like_transcription_factors;E_set_domains; title=CSL (RBP-JK) BOUND TO HES-1 NONCONSENSUS SITE organism=Mus musculus DNA sequence DT(A3):DA(B30) DC(A4):DG(B29) DT(A5):DA(B28) DT(A6):DA(B27) DT(A7):DA(B26) DC(A8):DG(B25) DA(A9):DT(B24) DC(A10):DG(B23) DA(A11):DT(B22) DC(A12):DG(B21) DG(A13):DC(B20) DA(A14):DT(B19) DT(A15):DA(B18) chainC ( 34) TYR86 0 0 0 0 10 3 0 0 0 0 0 0 0 ( 37) GLU89 0 0 0 0 0 0 1 2 4 0 0 0 0 ( 39) ARG91 0 0 0 0 0 0 3 11 12 0 0 0 0 (139) SER191 0 0 0 3 2 0 0 0 0 0 0 0 0 (140) LYS192 0 0 0 3 10 6 3 0 0 0 0 0 0 (169) SER221 0 0 0 0 0 0 0 0 2 1 0 0 0 (170) GLN222 0 0 0 0 0 0 0 0 0 4 11 1 0 prot.sequence ppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskkkqslknadlciasgtkvalfnrlrSQtvstrylhveggnfhassqqwgafyihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkeqnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlngggdvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgviystsltftytpep >3iay_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF DNA POLYMERASE DELTA organism=Saccharomyces cerevisiae DNA sequence DT(T6):DA(P11) DA(T7):DT(P10) DG(T8):DC(P9) DG(T9):DC(P8) DG(T10):DC(P7) DG(T11):DC(P6) DA(T12):DT(P5) DG(T13):DC(P4) DG(T14):DC(P3) DA(T15):DT(P2) DT(T16):DA(P1) chainA (350) LYS444 7 9 3 0 0 0 0 0 0 0 0 (486) GLN586 1 0 0 0 0 0 0 0 0 0 0 (714) LYS814 7 7 0 0 0 0 0 0 0 0 0 (715) ARG815 0 0 0 5 0 0 0 0 0 0 0 (739) ARG839 0 0 8 9 0 0 0 0 0 0 0 (799) ASN899 0 0 0 0 0 1 0 0 0 0 0 prot.sequence ssferkklptdfdpslydisfqqidaeqsvlngikdentstvvrffgvtseghsvlcnvtgfknylyvpapnssdandqeqinkfvhylnetfdhaidsievvskqsiwgysgdtklpfwkiyvtyphmvnklrtaferghlsfnswfsngtttydniaytlrlmvdcgivgmswitlpkgkysmiepnnrvsscqlevsinyrnliahpaegdwshtaplrimsfdiecagrigvfpepeydpviqianvvsiagakkpfirnvftlntcspitgsmifshateeemlsnwrnfiikvdpdviigynttnfdipyllnrakalkvndfpyfgrlktvkqeikesvfssKaygtretknvnidgrlqldllqfiqreyklrsytlnavsahflgeqsiisdlqngdsetrrrlavyclkdaylplrlmeklmalvnytemarvtgvpfsyllargqqikvvsqlfrkcleidtvipnmqsqasddQyegatviepirgyydvpiatldfnslypsimmahnlcyttlcnkatverlnlkidedyvitpngdyfvttkrrrgilpiildelisarkrakkdlrdekdpfkrdvlngrqlalkisansvygftgatvgklpclaisssvtaygrtmilktktavqekycikngykhdavvvygdtdsvmvkfgttdlkeamdlgteaakyvstlfkhpinlefekayfpyllinkKRyaglfwtnpdkfdkldqkglasvRrdscslvsivmnkvlkkiliernvdgalafvretindilhnrvdiskliisktlapnytNpQphavlaermkrregvgpnvgdrvdyviiggndklynraedplfvlenniqvdsryyltnqlqnpiisivapiigdkqangmfvv >3igc_A:DNA_breaking-rejoining_enzymes;DNA_topoisomerase_I_domain; title=SMALLPOX VIRUS TOPOISOMERASE-DNA TRANSITION STATE organism=Variola virus DNA sequence DT(B502):DA(D532) DG(B503):DC(D531) DT(B504):DA(D530) DC(B505):DG(D529) DG(B506):DC(D528) DC(B507):DG(D527) DC(B508):DG(D526) DC(B509):DG(D525) DT(B510):DA(D524) DT(B511):DA(D523) DA(C512):DT(D522) DT(C513):DA(D521) DT(C514):DA(D520) DC(C515):DG(D519) DC(C516):DG(D518) chainA ( 67) ARG67 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 69) GLN69 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 ( 70) TYR70 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 ( 72) TYR72 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 (133) LYS133 0 0 0 0 2 7 8 0 0 0 0 0 0 0 0 (135) LYS135 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (136) TYR136 0 0 0 0 0 0 9 16 0 0 0 0 0 0 0 (167) LYS167 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 (205) GLU205 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (206) ARG206 16 13 4 0 0 0 0 0 0 0 0 0 0 0 0 (209) TYR209 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 (266) THR266 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (268) SER268 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 (269) ILE269 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 (272) ARG272 0 0 0 0 0 0 0 0 0 0 4 12 5 0 0 prot.sequence mralfykdgklftdnnflnpvsdnnpayevlqhvkipthltdvvvygqtweealtrlifvgsdskgRrQYfYgkmhvqnRnakrdrifvrvynvmkrinsfinknikksstdsnyqlavfmlmetmffirfgKmKYlkenetvglltlknkhieispdkivikfvgKDkvshefvvhksnrlykpllkltddsspeeflfnklsERkvYesikqfgirikdlrtygvnytflynfwtnvksisplpspkklialtikqtaevvghTpSIskRaymattilemvkdknfldvvskttfdeflsivvdhvksstd >3igk_A:p53-like_transcription_factors; title=DIVERSITY IN DNA RECOGNITION BY P53 REVEALED BY CRYSTAL STRUCTURES WITH HOOGSTEEN BASE PAIRS (P53-DNA COMPLEX 2) organism=Homo sapiens DNA sequence DC(B1) DG(B2) DG(B3) DG(B4) DC(B5) DA(B6) DT(B7) DG(B8) DC(B9) DC(B10) DC(B11) DG(B12) chainA ( 27) LYS120 0 5 8 5 0 0 0 0 0 0 0 0 (184) ARG280 0 0 0 3 1 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqrmtevvrrcphhercsglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrspiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkkg >3igl_A:p53-like_transcription_factors; title=DIVERSITY IN DNA RECOGNITION BY P53 REVEALED BY CRYSTAL STRUCTURES WITH HOOGSTEEN BASE PAIRS (P53-DNA COMPLEX 1) organism=Homo sapiens DNA sequence DC(B1) DG(B2) DG(B3) DG(B4) DC(B5) DA(B6) DT(B7) DG(B8) DC(B9) DC(B10) DC(B11) DG(B12) chainA ( 27) LYS120 0 5 8 5 0 0 0 0 0 0 0 0 (184) ARG280 0 0 0 3 1 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkkg >3igm_B: title=A 2.2A CRYSTAL STRUCTURE OF THE AP2 DOMAIN OF PF14_0633 FROM P. FALCIPARUM, BOUND AS A DOMAIN-SWAPPED DIMER TO ITS COGNATE DNA organism=? DNA sequence DT(X1):DA(W8) DG(X2):DC(W7) DC(X3):DG(W6) DA(X4):DT(W5) DT(X5):DA(W4) DG(X6):DC(W3) DC(X7):DG(W2) chainB ( 9) SER70 0 0 3 0 0 0 0 ( 11) ASN72 0 0 0 3 8 0 0 ( 13) ARG74 0 0 0 0 6 5 4 ( 14) MET75 0 0 0 0 1 7 3 ( 18) LEU79 0 0 0 0 1 1 0 ( 20) PHE81 0 0 15 9 3 0 0 ( 22) TYR83 2 0 0 0 0 0 0 ( 27) ARG88 14 12 8 3 0 0 0 ( 29) SER90 0 0 0 0 7 1 0 ( 31) THR92 0 0 0 0 0 2 0 prot.sequence mssgypgvSwNkRMcawLaFfYdgasRrSrTfhpkhfnmdkekarlaavefmktvenngrkk >3ih7_A:DNA-glycosylase;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF CATALYTICALLY ACTIVE HUMAN 8-OXOGUANINE GLYCOSYLASE DISTALLY CROSSLINKED TO GUANINE-CONTAINING DNA organism=Homo sapiens DNA sequence DT(B4):DA(C30) DA(B5):DT(C29) DG(B6):DC(C28) DA(B7):DT(C27) DC(B8):DG(C26) DC(B9):DG(C25) DT(B10):DA(C24) DG(B11):DC(C23) DG(B12):DC(C22) DA(B13):DT(C21) DC(B14):DG(C20) DG(B15):DC(C19) chainA (132) PHE144 0 0 0 0 0 3 0 0 0 0 0 0 (137) ASN149 0 0 0 0 54 5 7 0 0 0 0 0 (139) ASN151 0 0 0 0 0 0 4 1 0 0 0 0 (142) ARG154 0 0 0 0 0 5 9 0 0 0 0 0 (191) TYR203 0 0 0 0 12 16 0 0 0 0 0 0 (192) ARG204 0 0 0 0 0 10 0 0 0 0 0 0 (237) LYS249 0 0 0 0 0 8 0 0 0 0 0 0 (241) CYS253 0 0 0 0 0 2 0 0 0 0 0 0 (245) MET257 0 0 0 0 0 2 0 0 0 0 0 0 (254) PRO266 0 0 0 0 0 4 0 0 0 0 0 0 (256) ASP268 0 0 0 0 0 11 0 0 0 0 0 0 (259) MET271 0 0 0 0 0 1 0 0 0 0 0 0 (303) GLN315 0 0 0 0 0 11 0 0 0 0 0 0 (307) PHE319 0 0 0 0 0 37 0 0 0 0 0 0 prot.sequence efghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsFicssNnNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRaryvsasaraileeqgglawlqqlressyeeahkalcilpgvgtKvadCiclMaldkpqavPvDvhMwhiaqrdyswhpttsqakgpcpqtnkelgnffrslwgpyagwaQavlFsadlrq >3ikt_AB:NADP-binding_Rossmann-fold_domains;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A REX-FAMILY REPRESSOR/DNA/NAD+ COMPLEX FROM THERMUS AQUATICUS organism=Thermus thermophilus HB27 DNA sequence DC(C1):DG(D22) DG(C2):DC(D21) DC(C3):DG(D20) DT(C4):DA(D19) DG(C5):DC(D18) DT(C6):DA(D17) DG(C7):DC(D16) DA(C8):DT(D15) DA(C9):DT(D14) DC(C10):DG(D13) DG(C11):DC(D12) DC(C12):DG(D11) DG(C13):DC(D10) DT(C14):DA(D9) DT(C15):DA(D8) DC(C16):DG(D7) DA(C17):DT(D6) DC(C18):DG(D5) DA(C19):DT(D4) DG(C20):DC(D3) DC(C21):DG(D2) DG(C22):DC(D1) chainA ( 44) PHE43 0 0 0 0 0 6 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN44 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG46 0 0 0 14 19 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) LYS47 0 0 0 0 0 1 6 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) SER50 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) TYR51 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 43) PHE43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 7 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 46) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 18 15 0 0 0 ( 47) LYS47 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 7 6 0 0 0 0 0 ( 50) SER50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 51) TYR51 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 58) ARG58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 prot.sequence gmkvpeaaisrlitylrileeleaqgvhrtsseqlgelaqvtaFQvRKdlSYfgsygtgytvpvlkrelrhilglnrkwglcivgmgrlgsaladypgfgesfelrgffdvdpekvgrpvrggviehvdllpqrvpgrieialltvpreaaqkaadllvaagikgilnfapvvlevpkevavenvdflagltrlsfailnpkwr/mkvpeaaisrlitylrileeleaqgvhrtsseqlgelaqvtaFQvRKdlSYfgsygtRgvgytvpvlkrelrhilglnrkwglcivgmgrlgsaladypgfgesfelrgffdvdpekvgrpvrggviehvdllpqrvpgrieialltvpreaaqkaadllvaagikgilnfapvvlevpkevavenvdflagltrlsfailnpkwr >3ikt_B:NADP-binding_Rossmann-fold_domains;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A REX-FAMILY REPRESSOR/DNA/NAD+ COMPLEX FROM THERMUS AQUATICUS organism=Thermus thermophilus HB27 DNA sequence DC(D1):DG(C22) DG(D2):DC(C21) DC(D3):DG(C20) DT(D4):DA(C19) DG(D5):DC(C18) DT(D6):DA(C17) DG(D7):DC(C16) DA(D8):DT(C15) DA(D9):DT(C14) DC(D10):DG(C13) DG(D11):DC(C12) DC(D12):DG(C11) DG(D13):DC(C10) DT(D14):DA(C9) DT(D15):DA(C8) DC(D16):DG(C7) DA(D17):DT(C6) DC(D18):DG(C5) DA(D19):DT(C4) DG(D20):DC(C3) DC(D21):DG(C2) DG(D22):DC(C1) chainB ( 43) PHE43 0 0 0 0 0 7 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG46 0 0 0 15 18 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) LYS47 0 0 0 0 0 6 7 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER50 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TYR51 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG58 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkvpeaaisrlitylrileeleaqgvhrtsseqlgelaqvtaFQvRKdlSYfgsygtRgvgytvpvlkrelrhilglnrkwglcivgmgrlgsaladypgfgesfelrgffdvdpekvgrpvrggviehvdllpqrvpgrieialltvpreaaqkaadllvaagikgilnfapvvlevpkevavenvdflagltrlsfailnpkwr >3il2_AB:NADP-binding_Rossmann-fold_domains;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A REX-FAMILY REPRESSOR R90D MUTANT/DNA COMPLEX FROM THERMUS AQUATICUS organism=Thermus thermophilus HB27 DNA sequence DC(C1):DG(D22) DG(C2):DC(D21) DC(C3):DG(D20) BRU(C4):DA(D19) DG(C5):DC(D18) BRU(C6):DA(D17) DG(C7):DC(D16) DA(C8):BRU(D15) DA(C9):BRU(D14) DC(C10):DG(D13) DG(C11):DC(D12) DC(C12):DG(D11) DG(C13):DC(D10) BRU(C14):DA(D9) BRU(C15):DA(D8) DC(C16):DG(D7) DA(C17):BRU(D6) DC(C18):DG(D5) DA(C19):BRU(D4) DG(C20):DC(D3) DC(C21):DG(D2) DG(C22):DC(D1) chainA ( 44) PHE43 0 0 0 0 0 7 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN44 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG46 0 0 0 18 17 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) LYS47 0 0 0 0 0 2 6 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) SER50 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) TYR51 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 43) PHE43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 12 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 46) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 16 15 0 0 0 ( 47) LYS47 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 5 1 0 0 0 0 0 ( 50) SER50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 51) TYR51 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 58) ARG58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 prot.sequence gmkvpeaaisrlitylrileeleaqgvhrtsseqlgelaqvtaFqvRKdlsyfgsygtgytvpvlkrelrhilglnrkwglcivgmgdlgsaladypgfgesfelrgffdvdpekvgrpvrggviehvdllpqrvpgrieialltvpreaaqkaadllvaagikgilnfapvvlevpkevavenvdflagltrlsfailnpkwr/mkvpeaaisrlitylrileeleaqgvhrtsseqlgelaqvtaFqvRKdlsyfgsygtRgvgytvpvlkrelrhilglnrkwglcivgmgdlgsaladypgfgesfelrgffdvdpekvgrpvrggviehvdllpqrvpgrieialltvpreaaqkaadllvaagikgilnfapvvlevpkevavenvdflagltrlsfailnpkwr >3il2_B:NADP-binding_Rossmann-fold_domains;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A REX-FAMILY REPRESSOR R90D MUTANT/DNA COMPLEX FROM THERMUS AQUATICUS organism=Thermus thermophilus HB27 DNA sequence DC(D1):DG(C22) DG(D2):DC(C21) DC(D3):DG(C20) BRU(D4):DA(C19) DG(D5):DC(C18) BRU(D6):DA(C17) DG(D7):DC(C16) DA(D8):BRU(C15) DA(D9):BRU(C14) DC(D10):DG(C13) DG(D11):DC(C12) DC(D12):DG(C11) DG(D13):DC(C10) BRU(D14):DA(C9) BRU(D15):DA(C8) DC(D16):DG(C7) DA(D17):BRU(C6) DC(D18):DG(C5) DA(D19):BRU(C4) DG(D20):DC(C3) DC(D21):DG(C2) DG(D22):DC(C1) chainB ( 43) PHE43 0 0 0 0 0 12 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG46 0 0 0 15 16 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) LYS47 0 0 0 0 0 1 5 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER50 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TYR51 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG58 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkvpeaaisrlitylrileeleaqgvhrtsseqlgelaqvtaFqvRKdlsyfgsygtRgvgytvpvlkrelrhilglnrkwglcivgmgdlgsaladypgfgesfelrgffdvdpekvgrpvrggviehvdllpqrvpgrieialltvpreaaqkaadllvaagikgilnfapvvlevpkevavenvdflagltrlsfailnpkwr >3imb_AC:Restriction_endonuclease-like; title=ALTERNATIVE BINDING MODE OF RESTRICTION ENDONUCLEASE BCNI TO COGNATE DNA organism=BREVIBACILLUS CENTROSPORUS DNA sequence DC(F-4):DG(E4) DG(F-3):DC(E3) DC(F-2):DG(E2) DC(F-1):DG(E1) DC(F0):DG(E0) DG(F1):DC(E-1) DG(F2):DC(E-2) DA(F3):DT(E-3) DC(F4):DG(E-4) DG(I-4):DC(J4) DT(I-3):DA(J3) DC(I-2):DG(J2) DC(I-1):DG(J1) DG(I0):DC(J0) DG(I1):DC(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) chainA ( 30) ARG30 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASP32 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP33 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN38 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN50 0 0 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 0 ( 71) SER71 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) THR74 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) HIS77 0 0 0 0 10 19 0 0 0 0 0 0 0 0 0 0 0 0 (111) PHE111 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) THR113 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASP200 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) CYS202 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) HIS214 0 0 0 0 0 5 12 0 0 0 0 0 0 0 0 0 0 0 (215) ASP215 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (216) ARG216 0 0 0 0 18 16 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS219 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ARG221 0 0 11 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 32) ASP32 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 ( 33) ASP33 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 ( 38) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 50) ASN50 0 0 0 0 0 0 0 0 0 2 8 3 0 0 0 0 0 0 ( 71) SER71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 ( 74) THR74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 ( 77) HIS77 0 0 0 0 0 0 0 0 0 0 0 0 16 11 0 0 0 0 (111) PHE111 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 1 0 0 (113) THR113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 (200) ASP200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 (202) CYS202 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 (214) HIS214 0 0 0 0 0 0 0 0 0 0 0 12 5 0 0 0 0 0 (215) ASP215 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (216) ARG216 0 0 0 0 0 0 0 0 0 0 0 0 18 21 0 0 0 0 (219) HIS219 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 (221) ARG221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 13 0 0 prot.sequence mkiwskeevvnklheiknkgylsvptdmfRtDDgvvgQilerqfgvqenNitlgdlgefelkgmrnrkakSnlTlfHkkpvagqtviqifnrfgyvkpssrnpevmkkklFtTikggrlnnlgltlnakhaseinlyyqdeylstwdlnlskieklvlvfaetigranspeeqfhftkaymlteinditslindgvlvmDlCidqdlskskgpHDRgpHlRipiskldklyrnierll/mkiwskeevvnklheiknkgylsvptdmfRtDDgvvgQilerqfgvqenNitlgdlgefelkgmrnrkakSnlTlfHkkpvagqtviqifnrfgyvkpssRnpevmkkklFtTikggrlnnlgltlnakhaseinlyyqdeylstwdlnlskieklvlvfaetigranspeeqfhftkaymlteinditslindgvlvmDlCidqdlskskgpHDRgpHlRipiskldklyrnierll >3imb_D:Restriction_endonuclease-like; title=ALTERNATIVE BINDING MODE OF RESTRICTION ENDONUCLEASE BCNI TO COGNATE DNA organism=? DNA sequence DG(K-4):DC(L4) DT(K-3):DA(L3) DC(K-2):DG(L2) DC(K-1):DG(L1) DG(K0):DC(L0) DG(K1):DC(L-1) DG(K2):DC(L-2) DC(K3):DG(L-3) DG(K4):DC(L-4) chainD ( 30) ARG30 0 0 0 2 0 0 0 0 0 ( 32) ASP32 0 0 0 6 4 0 0 0 0 ( 33) ASP33 0 0 0 0 4 10 0 0 0 ( 38) GLN38 0 0 0 1 0 0 0 0 0 ( 50) ASN50 3 8 2 0 0 0 0 0 0 ( 71) SER71 0 0 0 0 0 0 9 5 0 ( 74) THR74 0 0 0 0 0 8 0 0 0 ( 77) HIS77 0 0 0 14 11 0 0 0 0 (111) PHE111 0 0 0 0 4 13 0 0 0 (113) THR113 0 0 0 0 0 0 4 1 0 (200) ASP200 0 0 0 0 0 5 5 0 0 (202) CYS202 0 0 0 0 6 4 0 0 0 (214) HIS214 0 0 13 5 0 0 0 0 0 (215) ASP215 0 2 0 0 0 0 0 0 0 (216) ARG216 0 0 1 17 17 0 0 0 0 (219) HIS219 0 0 0 0 8 10 0 0 0 (221) ARG221 0 0 0 0 0 15 13 0 0 prot.sequence mkiwskeevvnklheiknkgylsvptdmfRtDDgvvgQilerqfgvqenNitlgdlgefelkgmrnrkakSnlTlfHkkpvagqtviqifnrfgyvkpssRnpevmkkklFtTikggrlnnlgltlnakhaseinlyyqdeylstwdlnlskieklvlvfaetigranspeeqfhftkaymlteinditslindgvlvmDlCidqdlskskgpHDRgpHlRipiskldklyrnierll >3irq_AD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A Z-Z JUNCTION organism=Homo sapiens DNA sequence DC(G1):DG(F13) DG(G2):DC(F12) DC(G3):DG(F11) DG(G4):DC(F10) DC(G5):DG(F9) DG(G6):DC(F8) DT(G7):DA(F7) DC(G8):DG(F6) DG(G9):DC(F5) DC(G10):DG(F4) DG(G11):DC(F3) DC(G12):DG(F2) DG(G13):DC(F1) chainD ( 42) TYR177 0 0 13 0 0 0 0 0 0 0 0 0 0 chainA ( 41) TYR177 0 0 0 0 0 0 0 0 0 0 12 0 0 ( 45) LYS181 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslaKkgklqkeagtpplwki/gshmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkiav >3irq_D:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A Z-Z JUNCTION organism=Homo sapiens DNA sequence DC(G1):DG(F13) DG(G2):DC(F12) DC(G3):DG(F11) DG(G4):DC(F10) DC(G5):DG(F9) DG(G6):DC(F8) DT(G7):DA(F7) DC(G8):DG(F6) DG(G9):DC(F5) DC(G10):DG(F4) DG(G11):DC(F3) DC(G12):DG(F2) DG(G13):DC(F1) chainD ( 42) TYR177 0 0 13 0 0 0 0 0 0 0 0 0 0 prot.sequence gshmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkiav >3irr_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A Z-Z JUNCTION (WITH HEPES INTERCALATING) organism=Homo sapiens DNA sequence DC(G0) DC(G1) DG(G2) DC(G3) DG(G4) DC(G5) DG(G6) DA(G7) DC(G8) DG(G9) DC(G10) DG(G11) DC(G12) DG(G13) chainA ( 42) TYR177 0 0 0 0 0 0 0 0 0 0 0 14 0 0 chainB ( 41) TYR177 0 0 0 0 11 0 0 0 0 0 0 0 0 0 prot.sequence gshmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkia/shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkia >3irr_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A Z-Z JUNCTION (WITH HEPES INTERCALATING) organism=Homo sapiens DNA sequence DC(G1):DG(F13) DG(G2):DC(F12) DC(G3):DG(F11) DG(G4):DC(F10) DC(G5):DG(F9) DG(G6):DC(F8) DA(G7):DT(F7) DC(G8):DG(F6) DG(G9):DC(F5) DC(G10):DG(F4) DG(G11):DC(F3) DC(G12):DG(F2) DG(G13):DC(F1) chainC ( 41) TYR177 0 0 0 0 0 0 0 0 0 14 0 0 0 prot.sequence shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkia >3irr_CD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A Z-Z JUNCTION (WITH HEPES INTERCALATING) organism=Homo sapiens DNA sequence DC(F1):DG(G13) DG(F2):DC(G12) DC(F3):DG(G11) DG(F4):DC(G10) DC(F5):DG(G9) DG(F6):DC(G8) DT(F7):DA(G7) DC(F8):DG(G6) DG(F9):DC(G5) DC(F10):DG(G4) DG(F11):DC(G3) DC(F12):DG(G2) DG(F13):DC(G1) chainC ( 41) TYR177 0 0 0 14 0 0 0 0 0 0 0 0 0 chainD ( 42) TYR177 0 0 0 0 0 0 0 0 0 0 11 0 0 prot.sequence shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkia/gshmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkiav >3isb_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX OF HUMAN DNA POLYMERASE BETA WITH A GAPPED DNA organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 40 ( 29) LYS35 0 0 0 0 8 ( 32) ALA38 0 0 0 0 4 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3isc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX OF HUMAN DNA POLYMERASE BETA WITH AN ABASIC SITE (THF) IN THE GAPPED DNA organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 36 ( 29) LYS35 0 0 0 0 8 ( 32) ALA38 0 0 0 0 5 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3isd_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF HUMAN DNA POLYMERASE BETA WITH AN ABASIC SITE (THF): DAPCPP MISMATCH organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 34 ( 26) LYS35 0 0 0 0 6 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3iv5_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP OPTIMAL BINDING SEQUENCE F1 organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DA(C12):DT(D16) DA(C13):DT(D15) DT(C14):DA(D14) DT(C15):DA(D13) DT(C16):DA(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 68) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 12 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >3iv5_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP OPTIMAL BINDING SEQUENCE F1 organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DA(C12):DT(D16) DA(C13):DT(D15) DT(C14):DA(D14) DT(C15):DA(D13) DT(C16):DA(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 68) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 12 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 14 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) THR87 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) LYS90 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRKklkkygmn >3iyd_A:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase; title=THREE-DIMENSIONAL EM STRUCTURE OF AN INTACT ACTIVATOR-DEPENDENT TRANSCRIPTION INITIATION COMPLEX organism=ESCHERICHIA COLI DNA sequence DC(J1):DG(I98) DT(J2):DA(I97) DT(J3):DA(I96) DG(J4):DC(I95) DT(J5):DA(I94) DT(J6):DA(I93) DA(J7):DT(I92) DT(J8):DA(I91) DC(J9):DG(I90) DC(J10):DG(I89) DG(J11):DC(I88) DC(J12):DG(I87) DT(J13):DA(I86) DC(J14):DG(I85) DA(J15):DT(I84) DC(J16):DG(I83) DA(J17):DT(I82) DA(J18):DA(I81) DT(J19):DT(I80) DT(J20):DT(I79) DC(J21):DC(I78) DC(J22):DC(I77) DA(J23):DA(I76) DC(J24):DC(I75) DA(J25):DG(I74) DC(J26):DC(I73) DT(J27):DT(I72) DA(J28):DA(I71) DA(J29):DA(I70) DT(J30):DT(I69) DT(J31):DA(I68) DA(J32):DT(I67) DC(J33):DG(I66) DG(J34):DC(I65) DA(J35):DT(I64) DG(J36):DC(I63) DC(J37):DG(I62) DC(J38):DG(I61) DG(J39):DC(I60) DG(J40):DC(I59) DA(J41):DT(I58) DA(J42):DT(I57) DG(J43):DC(I56) DC(J44):DG(I55) DA(J45):DT(I54) DT(J46):DA(I53) DA(J47):DT(I52) DA(J48):DT(I51) DA(J49):DT(I50) DG(J50):DC(I49) DT(J51):DA(I48) DG(J52):DC(I47) DT(J53):DA(I46) DA(J54):DT(I45) DA(J55):DT(I44) DA(J56):DT(I43) DG(J57):DC(I42) DC(J58):DG(I41) DC(J59):DG(I40) DT(J60):DA(I39) DT(J61):DA(I38) DT(J62):DA(I37) DT(J63):DA(I36) DT(J64):DA(I35) DT(J65):DA(I34) DG(J66):DC(I33) DC(J67):DG(I32) DC(J68):DG(I31) DT(J69):DA(I30) DA(J70):DT(I29) DA(J71):DT(I28) DA(J72):DT(I27) DA(J73):DT(I26) DT(J74):DA(I25) DG(J75):DC(I24) DT(J76):DA(I23) DG(J77):DC(I22) DA(J78):DT(I21) DT(J79):DA(I20) DC(J80):DG(I19) DT(J81):DA(I18) DA(J82):DT(I17) DG(J83):DC(I16) DA(J84):DT(I15) DT(J85):DA(I14) DC(J86):DG(I13) DA(J87):DT(I12) DC(J88):DG(I11) DA(J89):DT(I10) DT(J90):DA(I9) DT(J91):DA(I8) DT(J92):DA(I7) DA(J93):DT(I6) DT(J94):DA(I5) DT(J95):DA(I4) DG(J96):DC(I3) DC(J97):DG(I2) DG(J98):DC(I1) chainA (291) LYS297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qgsvteflkprlvdieqvssthakvtleplergfghtlgnalrrillssmpgcavteveidgvlheystkegvqedileillnlkglavrvqgkdeviltlnksgigpvtaadithdgdveivkpqhvichltdenasismrikvqrgrgyvpastrierpigrllvdacyspveriaynveaarveqrtdldklviemetngtidpeeairraatilaeqleafvdlrdvrqpevkeekpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgKkslteikdvlasrglslgmrlenwppasiad >3iyd_ACDFGH:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=THREE-DIMENSIONAL EM STRUCTURE OF AN INTACT ACTIVATOR-DEPENDENT TRANSCRIPTION INITIATION COMPLEX organism=ESCHERICHIA COLI / ESCHERICHIA COLI K-12 DNA sequence DC(J1):DG(I98) DT(J2):DA(I97) DT(J3):DA(I96) DG(J4):DC(I95) DT(J5):DA(I94) DT(J6):DA(I93) DA(J7):DT(I92) DT(J8):DA(I91) DC(J9):DG(I90) DC(J10):DG(I89) DG(J11):DC(I88) DC(J12):DG(I87) DT(J13):DA(I86) DC(J14):DG(I85) DA(J15):DT(I84) DC(J16):DG(I83) DA(J17):DT(I82) DA(J18):DA(I81) DT(J19):DT(I80) DT(J20):DT(I79) DC(J21):DC(I78) DC(J22):DC(I77) DA(J23):DA(I76) DC(J24):DC(I75) DA(J25):DG(I74) DC(J26):DC(I73) DT(J27):DT(I72) DA(J28):DA(I71) DA(J29):DA(I70) DT(J30):DT(I69) DT(J31):DA(I68) DA(J32):DT(I67) DC(J33):DG(I66) DG(J34):DC(I65) DA(J35):DT(I64) DG(J36):DC(I63) DC(J37):DG(I62) DC(J38):DG(I61) DG(J39):DC(I60) DG(J40):DC(I59) DA(J41):DT(I58) DA(J42):DT(I57) DG(J43):DC(I56) DC(J44):DG(I55) DA(J45):DT(I54) DT(J46):DA(I53) DA(J47):DT(I52) DA(J48):DT(I51) DA(J49):DT(I50) DG(J50):DC(I49) DT(J51):DA(I48) DG(J52):DC(I47) DT(J53):DA(I46) DA(J54):DT(I45) DA(J55):DT(I44) DA(J56):DT(I43) DG(J57):DC(I42) DC(J58):DG(I41) DC(J59):DG(I40) DT(J60):DA(I39) DT(J61):DA(I38) DT(J62):DA(I37) DT(J63):DA(I36) DT(J64):DA(I35) DT(J65):DA(I34) DG(J66):DC(I33) DC(J67):DG(I32) DC(J68):DG(I31) DT(J69):DA(I30) DA(J70):DT(I29) DA(J71):DT(I28) DA(J72):DT(I27) DA(J73):DT(I26) DT(J74):DA(I25) DG(J75):DC(I24) DT(J76):DA(I23) DG(J77):DC(I22) DA(J78):DT(I21) DT(J79):DA(I20) DC(J80):DG(I19) DT(J81):DA(I18) DA(J82):DT(I17) DG(J83):DC(I16) DA(J84):DT(I15) DT(J85):DA(I14) DC(J86):DG(I13) DA(J87):DT(I12) DC(J88):DG(I11) DA(J89):DT(I10) DT(J90):DA(I9) DT(J91):DA(I8) DT(J92):DA(I7) DA(J93):DT(I6) DT(J94):DA(I5) DT(J95):DA(I4) DG(J96):DC(I3) DC(J97):DG(I2) DG(J98):DC(I1) chainA (291) LYS297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 54) SER63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) TYR179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) PHE389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) PHE390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (987) ASP1240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1019) GLU1272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) LYS334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) ARG337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) GLN340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) LEU343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (451) GLN465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (784) ARG798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (788) ASP802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (262) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (322) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ILE457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) GLU503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (453) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (454) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (172) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 18) LYS26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 (162) GLN170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 (171) SER179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 8 0 0 0 0 0 0 0 0 0 (173) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 3 1 0 0 0 0 0 0 0 0 0 0 (174) THR182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qgsvteflkprlvdieqvssthakvtleplergfghtlgnalrrillssmpgcavteveidgvlheystkegvqedileillnlkglavrvqgkdeviltlnksgigpvtaadithdgdveivkpqhvichltdenasismrikvqrgrgyvpastrierpigrllvdacyspveriaynveaarveqrtdldklviemetngtidpeeairraatilaeqleafvdlrdvrqpevkeekpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgKkslteikdvlasrglslgmrlenwppasiad/rirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsySgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipYRgsWldfefdpkdnlfvridRrrklpatiilralnytteqildlffekvdllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlFFsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveRavkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvDdkmharstgsyslvtqqplggkaqfggqrfgEmevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSnkrplksladmikgKqgRfRQnlLgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdQmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltRrlvDvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraageapaap/megeidiakriedginqvqcsvaeypeaitylleqynrveaeearlsdlitgfvdpnaeedlaptathvgselsqedldidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlrlvisiakkYtNRglqfldliqegniglmkavdkfeyrrgykfSTyatWwirqaitrsiadqartiripVHmIEtinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakEpismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdhtleevgkqfdvtRERiRQieakalrklrhpsrsevlrsfl/ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsRETvgRilkmledqnlisahgktivvygtr/ptlewflshchihkypsKstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcSRETvgRilkmledqnlisahgktivvygtr >3iyd_H:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THREE-DIMENSIONAL EM STRUCTURE OF AN INTACT ACTIVATOR-DEPENDENT TRANSCRIPTION INITIATION COMPLEX organism=ESCHERICHIA COLI K-12 DNA sequence DC(J1):DG(I98) DT(J2):DA(I97) DT(J3):DA(I96) DG(J4):DC(I95) DT(J5):DA(I94) DT(J6):DA(I93) DA(J7):DT(I92) DT(J8):DA(I91) DC(J9):DG(I90) DC(J10):DG(I89) DG(J11):DC(I88) DC(J12):DG(I87) DT(J13):DA(I86) DC(J14):DG(I85) DA(J15):DT(I84) DC(J16):DG(I83) DA(J17):DT(I82) DA(J18):DA(I81) DT(J19):DT(I80) DT(J20):DT(I79) DC(J21):DC(I78) DC(J22):DC(I77) DA(J23):DA(I76) DC(J24):DC(I75) DA(J25):DG(I74) DC(J26):DC(I73) DT(J27):DT(I72) DA(J28):DA(I71) DA(J29):DA(I70) DT(J30):DT(I69) DT(J31):DA(I68) DA(J32):DT(I67) DC(J33):DG(I66) DG(J34):DC(I65) DA(J35):DT(I64) DG(J36):DC(I63) DC(J37):DG(I62) DC(J38):DG(I61) DG(J39):DC(I60) DG(J40):DC(I59) DA(J41):DT(I58) DA(J42):DT(I57) DG(J43):DC(I56) DC(J44):DG(I55) DA(J45):DT(I54) DT(J46):DA(I53) DA(J47):DT(I52) DA(J48):DT(I51) DA(J49):DT(I50) DG(J50):DC(I49) DT(J51):DA(I48) DG(J52):DC(I47) DT(J53):DA(I46) DA(J54):DT(I45) DA(J55):DT(I44) DA(J56):DT(I43) DG(J57):DC(I42) DC(J58):DG(I41) DC(J59):DG(I40) DT(J60):DA(I39) DT(J61):DA(I38) DT(J62):DA(I37) DT(J63):DA(I36) DT(J64):DA(I35) DT(J65):DA(I34) DG(J66):DC(I33) DC(J67):DG(I32) DC(J68):DG(I31) DT(J69):DA(I30) DA(J70):DT(I29) DA(J71):DT(I28) DA(J72):DT(I27) DA(J73):DT(I26) DT(J74):DA(I25) DG(J75):DC(I24) DT(J76):DA(I23) DG(J77):DC(I22) DA(J78):DT(I21) DT(J79):DA(I20) DC(J80):DG(I19) DT(J81):DA(I18) DA(J82):DT(I17) DG(J83):DC(I16) DA(J84):DT(I15) DT(J85):DA(I14) DC(J86):DG(I13) DA(J87):DT(I12) DC(J88):DG(I11) DA(J89):DT(I10) DT(J90):DA(I9) DT(J91):DA(I8) DT(J92):DA(I7) DA(J93):DT(I6) DT(J94):DA(I5) DT(J95):DA(I4) DG(J96):DC(I3) DC(J97):DG(I2) DG(J98):DC(I1) chainH ( 18) LYS26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 (162) GLN170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 (171) SER179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 8 0 0 0 0 0 0 0 0 0 (173) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 3 1 0 0 0 0 0 0 0 0 0 0 (174) THR182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ptlewflshchihkypsKstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcSRETvgRilkmledqnlisahgktivvygtr >3j9x_A: title=A VIRUS THAT INFECTS A HYPERTHERMOPHILE ENCAPSIDATES A-FORM DNA organism=SULFOLOBUS ISLANDICUS ROD-SHAPED VIRUS 2 DNA sequence DA(71):DT(8348) DT(72):DA(8347) DA(73):DT(8346) DT(74):DA(8345) DA(75):DT(8344) DT(76):DA(8343) DA(77):DT(8342) DT(78):DA(8341) DA(79):DT(8340) DT(710):DA(8339) DA(711):DT(8338) DT(712):DA(8337) DA(713):DT(8336) DT(714):DA(8335) DA(715):DT(8334) DT(716):DA(8333) DA(717):DT(8332) DT(718):DA(8331) DA(719):DT(8330) DT(720):DA(8329) DA(721):DT(8328) DT(722):DA(8327) DA(723):DT(8326) DT(724):DA(8325) DA(725):DT(8324) DT(726):DA(8323) DA(727):DT(8322) DT(728):DA(8321) DA(729):DT(8320) DT(730):DA(8319) DA(731):DT(8318) DT(732):DA(8317) DA(733):DT(8316) DT(734):DA(8315) DA(735):DT(8314) DT(736):DA(8313) DA(737):DT(8312) DT(738):DA(8311) DA(739):DT(8310) DT(740):DA(8309) DA(741):DT(8308) DT(742):DA(8307) DA(743):DT(8306) DT(744):DA(8305) DA(745):DT(8304) DT(746):DA(8303) DA(747):DT(8302) DT(748):DA(8301) DA(749):DT(8300) DT(750):DA(8299) DA(751):DT(8298) DT(752):DA(8297) DA(753):DT(8296) DT(754):DA(8295) DA(755):DT(8294) DT(756):DA(8293) DA(757):DT(8292) DT(758):DA(8291) DA(759):DT(8290) DT(760):DA(8289) DA(761):DT(8288) DT(762):DA(8287) DA(763):DT(8286) DT(764):DA(8285) DA(765):DT(8284) DT(766):DA(8283) DA(767):DT(8282) DT(768):DA(8281) DA(769):DT(8280) DT(770):DA(8279) DA(771):DT(8278) DT(772):DA(8277) DA(773):DT(8276) DT(774):DA(8275) DA(775):DT(8274) DT(776):DA(8273) DA(777):DT(8272) DT(778):DA(8271) DA(779):DT(8270) DT(780):DA(8269) DA(781):DT(8268) DT(782):DA(8267) DA(783):DT(8266) DT(784):DA(8265) DA(785):DT(8264) DT(786):DA(8263) DA(787):DT(8262) DT(788):DA(8261) DA(789):DT(8260) DT(790):DA(8259) DA(791):DT(8258) DT(792):DA(8257) DA(793):DT(8256) DT(794):DA(8255) DA(795):DT(8254) DT(796):DA(8253) DA(797):DT(8252) DT(798):DA(8251) DA(799):DT(8250) DT(7100):DA(8249) DA(7101):DT(8248) DT(7102):DA(8247) DA(7103):DT(8246) DT(7104):DA(8245) DA(7105):DT(8244) DT(7106):DA(8243) DA(7107):DT(8242) DT(7108):DA(8241) DA(7109):DT(8240) DT(7110):DA(8239) DA(7111):DT(8238) DT(7112):DA(8237) DA(7113):DT(8236) DT(7114):DA(8235) DA(7115):DT(8234) DT(7116):DA(8233) DA(7117):DT(8232) DT(7118):DA(8231) DA(7119):DT(8230) DT(7120):DA(8229) DA(7121):DT(8228) DT(7122):DA(8227) DA(7123):DT(8226) DT(7124):DA(8225) DA(7125):DT(8224) DT(7126):DA(8223) DA(7127):DT(8222) DT(7128):DA(8221) DA(7129):DT(8220) DT(7130):DA(8219) DA(7131):DT(8218) DT(7132):DA(8217) DA(7133):DT(8216) DT(7134):DA(8215) DA(7135):DT(8214) DT(7136):DA(8213) DA(7137):DT(8212) DT(7138):DA(8211) DA(7139):DT(8210) DT(7140):DA(8209) DA(7141):DT(8208) DT(7142):DA(8207) DA(7143):DT(8206) DT(7144):DA(8205) DA(7145):DT(8204) DT(7146):DA(8203) DA(7147):DT(8202) DT(7148):DA(8201) DA(7149):DT(8200) DT(7150):DA(8199) DA(7151):DT(8198) DT(7152):DA(8197) DA(7153):DT(8196) DT(7154):DA(8195) DA(7155):DT(8194) DT(7156):DA(8193) DA(7157):DT(8192) DT(7158):DA(8191) DA(7159):DT(8190) DT(7160):DA(8189) DA(7161):DT(8188) DT(7162):DA(8187) DA(7163):DT(8186) DT(7164):DA(8185) DA(7165):DT(8184) DT(7166):DA(8183) DA(7167):DT(8182) DT(7168):DA(8181) DA(7169):DT(8180) DT(7170):DA(8179) DA(7171):DT(8178) DT(7172):DA(8177) DA(7173):DT(8176) DT(7174):DA(8175) DA(7175):DT(8174) DT(7176):DA(8173) DA(7177):DT(8172) DT(7178):DA(8171) DA(7179):DT(8170) DT(7180):DA(8169) DA(7181):DT(8168) DT(7182):DA(8167) DA(7183):DT(8166) DT(7184):DA(8165) DA(7185):DT(8164) DT(7186):DA(8163) DA(7187):DT(8162) DT(7188):DA(8161) DA(7189):DT(8160) DT(7190):DA(8159) DA(7191):DT(8158) DT(7192):DA(8157) DA(7193):DT(8156) DT(7194):DA(8155) DA(7195):DT(8154) DT(7196):DA(8153) DA(7197):DT(8152) DT(7198):DA(8151) DA(7199):DT(8150) DT(7200):DA(8149) DA(7201):DT(8148) DT(7202):DA(8147) DA(7203):DT(8146) DT(7204):DA(8145) DA(7205):DT(8144) DT(7206):DA(8143) DA(7207):DT(8142) DT(7208):DA(8141) DA(7209):DT(8140) DT(7210):DA(8139) DA(7211):DT(8138) DT(7212):DA(8137) DA(7213):DT(8136) DT(7214):DA(8135) DA(7215):DT(8134) DT(7216):DA(8133) DA(7217):DT(8132) DT(7218):DA(8131) DA(7219):DT(8130) DT(7220):DA(8129) DA(7221):DT(8128) DT(7222):DA(8127) DA(7223):DT(8126) DT(7224):DA(8125) DA(7225):DT(8124) DT(7226):DA(8123) DA(7227):DT(8122) DT(7228):DA(8121) DA(7229):DT(8120) DT(7230):DA(8119) DA(7231):DT(8118) DT(7232):DA(8117) DA(7233):DT(8116) DT(7234):DA(8115) DA(7235):DT(8114) DT(7236):DA(8113) DA(7237):DT(8112) DT(7238):DA(8111) DA(7239):DT(8110) DT(7240):DA(8109) DA(7241):DT(8108) DT(7242):DA(8107) DA(7243):DT(8106) DT(7244):DA(8105) DA(7245):DT(8104) DT(7246):DA(8103) DA(7247):DT(8102) DT(7248):DA(8101) DA(7249):DT(8100) DT(7250):DA(899) DA(7251):DT(898) DT(7252):DA(897) DA(7253):DT(896) DT(7254):DA(895) DA(7255):DT(894) DT(7256):DA(893) DA(7257):DT(892) DT(7258):DA(891) DA(7259):DT(890) DT(7260):DA(889) DA(7261):DT(888) DT(7262):DA(887) DA(7263):DT(886) DT(7264):DA(885) DA(7265):DT(884) DT(7266):DA(883) DA(7267):DT(882) DT(7268):DA(881) DA(7269):DT(880) DT(7270):DA(879) DA(7271):DT(878) DT(7272):DA(877) DA(7273):DT(876) DT(7274):DA(875) DA(7275):DT(874) DT(7276):DA(873) DA(7277):DT(872) DT(7278):DA(871) DA(7279):DT(870) DT(7280):DA(869) DA(7281):DT(868) DT(7282):DA(867) DA(7283):DT(866) DT(7284):DA(865) DA(7285):DT(864) DT(7286):DA(863) DA(7287):DT(862) DT(7288):DA(861) DA(7289):DT(860) DT(7290):DA(859) DA(7291):DT(858) DT(7292):DA(857) DA(7293):DT(856) DT(7294):DA(855) DA(7295):DT(854) DT(7296):DA(853) DA(7297):DT(852) DT(7298):DA(851) DA(7299):DT(850) DT(7300):DA(849) DA(7301):DT(848) DT(7302):DA(847) DA(7303):DT(846) DT(7304):DA(845) DA(7305):DT(844) DT(7306):DA(843) DA(7307):DT(842) DT(7308):DA(841) DA(7309):DT(840) DT(7310):DA(839) DA(7311):DT(838) DT(7312):DA(837) DA(7313):DT(836) DT(7314):DA(835) DA(7315):DT(834) DT(7316):DA(833) DA(7317):DT(832) DT(7318):DA(831) DA(7319):DT(830) DT(7320):DA(829) DA(7321):DT(828) DT(7322):DA(827) DA(7323):DT(826) DT(7324):DA(825) DA(7325):DT(824) DT(7326):DA(823) DA(7327):DT(822) DT(7328):DA(821) DA(7329):DT(820) DT(7330):DA(819) DA(7331):DT(818) DT(7332):DA(817) DA(7333):DT(816) DT(7334):DA(815) DA(7335):DT(814) DT(7336):DA(813) DA(7337):DT(812) DT(7338):DA(811) DA(7339):DT(810) DT(7340):DA(89) DA(7341):DT(88) DT(7342):DA(87) DA(7343):DT(86) DT(7344):DA(85) DA(7345):DT(84) DT(7346):DA(83) DA(7347):DT(82) DT(7348):DA(81) chainA ( 7) ARG13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 11) TRP17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 39) PHE45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 65) PRO71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ALA74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) LEU81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence srsysqRyakWqakfnafsnptvastilsnvspvaqqnFqtnvpkftsvnenvsavltqygitgPnrAiyqgfgLkvaralnrigsgpalvnminglkgyyisafnanpqvldavvniitgsptgyvs >3jaa_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA IN COMPLEX WITH NORMAL DNA AND INCO NUCLEOTIDE (NRM) organism=HOMO SAPIENS DNA sequence DA(P2):DT(T13) DG(P3):DC(T12) DC(P4):DG(T11) DG(P5):DC(T10) DT(P6):DA(T9) DC(P7):DG(T8) DA(P8):DT(T7) DT(P9):DA(T6) chainA (322) SER322 0 0 0 0 0 0 3 1 (378) LEU378 0 0 0 0 0 2 5 0 (382) ARG382 0 0 19 11 0 0 0 0 (419) MET421 0 0 0 0 0 0 1 0 (421) PHE423 0 0 0 0 0 0 5 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgtewsppltMlFlcatkfsas >3jbw_C: title=CRYO-ELECTRON MICROSCOPY STRUCTURE OF RAG PAIRED COMPLEX (WITH NBD, NO SYMMETRY) organism=? DNA sequence DA(E2):DT(F33) DC(E3):DG(F32) DA(E4):DT(F31) DG(E5):DC(F30) DT(E6):DA(F29) DG(E7):DC(F28) DC(E8):DG(F27) DT(E9):DA(F26) DA(E10):DT(F25) DC(E11):DG(F24) DA(E12):DT(F23) DG(E13):DC(F22) DA(E14):DT(F21) DC(E15):DG(F20) DT(E16):DA(F19) DG(E17):DC(F18) DG(E18):DC(F17) DA(E19):DT(F15) DC(E21):DG(F14) DA(E22):DT(F13) DA(E23):DT(F12) DA(E24):DT(F11) DA(E25):DT(F10) DA(E26):DT(F9) DC(E27):DG(F8) DC(E28):DG(F7) DC(E29):DG(F6) DT(E30):DA(F5) DG(E31):DC(F4) DC(E32):DG(F3) DA(E33):DT(F2) DG(E34):DC(F1) chainC (465) ASN872 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) ASN874 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG877 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (574) GLU981 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (578) SER985 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ggrprqhllsltrraqkhrlrdlknqvktfaekeeggdvksvcltlfllalragnehkqadeleammqgrgfglhpavclairvntflscsqyhkmyrtvkatsgrqifqplhtlrnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekhgsgpavpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmNgNyaRrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasEgneSgnklfrrfrkmnarqsktfeledilkhhwlytskylqkfmeahk >3jbx_C: title=CRYO-ELECTRON MICROSCOPY STRUCTURE OF RAG SIGNAL END COMPLEX (C2 SYMMETRY) organism=DANIO RERIO DNA sequence DT(F2):DC(E15) DC(F3):DG(E13) DT(F4):DA(E12) DG(F5):DC(E11) DT(F6):DA(E10) DA(F7):DT(E9) DG(F8):DC(E8) DC(F9):DG(E7) DA(F10):DT(E6) DC(F11):DG(E5) DT(F12):DA(E4) DG(F13):DC(E3) DT(F14):DA(E2) chainC (192) GLU671 0 0 0 0 0 0 0 0 0 0 0 1 0 (393) ASN872 0 0 0 0 0 0 0 0 0 0 0 0 1 (395) ASN874 0 0 0 0 0 0 0 0 0 0 4 6 5 (398) ARG877 0 0 0 0 0 0 0 0 0 0 0 0 20 (502) GLU981 0 0 0 0 0 0 0 0 0 0 0 0 19 (506) SER985 0 0 0 0 0 0 0 0 0 0 0 0 6 (509) LYS988 0 0 0 0 0 0 0 0 0 0 0 6 2 prot.sequence glhpavclairvntflscsqyhkmyrtvkatsgrqifqplhtlrnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekhgsgpavpekavrfsftimsisirlegeddgitifqeqkpnsElscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmNgNyaRrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasEgneSgnKlfrrfrkmnarqsktfeledilkhhwlytskylqkfmeahk >3jby_D:Galactose_oxidase,_central_domain; title=CRYO-ELECTRON MICROSCOPY STRUCTURE OF RAG PAIRED COMPLEX (C2 SYMMETRY) organism=? DNA sequence DG(J1):DC(F31) DA(J2):DT(F30) DT(J3):DA(F29) DC(J4):DG(F28) DT(J5):DA(F27) DG(J6):DC(F26) DG(J7):DC(F25) DC(J8):DG(F24) DC(J9):DG(F23) DT(J10):DA(F22) DG(J11):DC(F21) DT(J12):DA(F20) DC(J13):DG(F19) DT(J14):DA(F18) DT(J15):DA(F17) chainD (117) ASN117 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 prot.sequence mslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcNrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq >3jca_E:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase;N-terminal_Zn_binding_domain_of_HIV_integrase; title=CORE MODEL OF THE MOUSE MAMMARY TUMOR VIRUS INTASOME organism=MOUSE MAMMARY TUMOR VIRUS DNA sequence DA(L2):DT(K21) DG(L3):DC(K20) DG(L4):DC(K19) DT(L5):DA(K18) DC(L6):DG(K17) DG(L7):DC(K16) DG(L8):DC(K15) DC(L9):DG(K14) DC(L10):DG(K13) DG(L11):DC(K12) DA(L12):DT(K11) DC(L13):DG(K10) DT(L14):DA(K9) DG(L15):DC(K8) DC(L16):DG(K7) DG(L17):DC(K6) DG(L18):DC(K5) DC(L19):DG(K4) chainE (149) GLN152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 (152) ALA155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (156) ARG159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 5 1 (159) GLN162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 (237) ARG240 0 0 0 0 0 0 0 0 0 0 0 0 13 12 5 2 0 0 prot.sequence alesaqeshalhhqnaaalrfqfhitreqareivklcpncphapqlgvnprglkprvlwqmdvthvsefgklkyvhvtvdtyshftfatartgeatkdvlqhlaqsfaymgipqkiktdnapayvsrsiqeflarwkishvtgipynpQgqAiveRthQnikaqlnklqkagkyytphhllahalfvlnhvnmdnqghtaaerhwgpisadpkpmvmwkdlltgswkgpdvlitagRgyacvfpqdaespiwvpdrfirpft >3jca_H:DNA-binding_domain_of_retroviral_integrase; title=CORE MODEL OF THE MOUSE MAMMARY TUMOR VIRUS INTASOME organism=MOUSE MAMMARY TUMOR VIRUS DNA sequence DA(K1) DA(K2) DT(K3) DG(K4) DC(K5) DC(K6) DG(K7) DC(K8) DA(K9) DG(K10) DT(K11) DC(K12) DG(K13) DG(K14) DC(K15) DC(K16) DG(K17) DA(K18) DC(K19) DC(K20) DT(K21) chainH ( 24) ARG240 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) TYR242 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) CYS244 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO253 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TRP255 60 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pmvmwkdlltgswkgpdvlitagRgYaCvfpqdaesPiWvpdrfirpft >3jpn_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-DICHLORO METHYLENE TRIPHOSPHATE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 37 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3jpo_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-MONOCHLOROMETHYLENE TRIPHOSPHATE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 36 ( 26) LYS35 0 0 0 0 6 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3jpp_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-MONOMETHYL METHYLENE TRIPHOSPHATE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 37 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3jpq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-MONOBROMO METHYLENE TRIPHOSPHATE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 39 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3jpr_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-DIMETHYL METHYLENE TRIPHOSPHATE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 41 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3jps_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-FLUORO METHYL METHYLENE TRIPHOSPHATE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 38 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3jpt_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-FLUORO CHLORO METHYLENE TRIPHOSPHATE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 39 0 0 0 0 ( 26) LYS35 7 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3jr4_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM INTERROGATING AN EXTRAHELICAL G organism=Geobacillus stearothermophilus DNA sequence DC(C3):DG(B15) DG(C4):DC(B14) DT(C5):DA(B13) DC(C6):DG(B12) DC(C7):DG(B11) DA(C8):DT(B10) GX1(C9):DC(B9) DG(C10):DC(B8) DT(C11):DA(B7) DC(C12):DG(B6) DT(C13):DA(B5) chainA ( 75) ARG76 0 0 0 0 0 0 0 4 2 0 0 ( 76) MET77 0 0 0 0 0 0 5 9 0 0 0 ( 77) GLU78 0 0 0 0 0 0 5 0 0 0 0 (111) ARG112 0 0 0 0 0 60 12 1 0 0 0 (113) PHE114 0 0 0 0 0 0 8 33 0 0 0 (173) CYS174 0 0 0 0 0 0 2 0 0 0 0 (174) ILE175 0 0 0 0 0 0 3 0 0 0 0 (231) TYR242 0 0 0 0 0 0 6 0 0 0 0 (253) ARG264 0 0 0 0 0 0 4 0 6 4 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldqtvvagfgciyvdeslfragilpgrpaaslsskeierlheemvatigeavmkggstagtfqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3jr5_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM LESION RECOGNITION CONTROL COMPLEX WITH N174C CROSSLINKING SITE organism=Geobacillus stearothermophilus DNA sequence DC(C3):DG(B15) DG(C4):DC(B14) DT(C5):DA(B13) DC(C6):DG(B12) DC(C7):DG(B11) OGX(C8):DC(B10) DA(C9):DT(B9) DG(C10):DC(B8) DT(C11):DA(B7) DC(C12):DG(B6) DT(C13):DA(B5) DA(C14):DT(B4) DC(C15):DG(B3) DC(C16):DG(B2) chainA ( 1) PRO2 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 2) GLN3 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 5) GLU6 0 0 0 0 0 10 0 0 0 0 0 0 0 0 ( 75) ARG76 0 0 0 0 0 0 7 3 0 0 0 0 0 0 ( 76) MET77 0 0 0 0 0 2 10 0 0 0 0 0 0 0 ( 77) GLU78 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (111) ARG112 0 0 0 0 82 14 1 0 0 0 0 0 0 0 (113) PHE114 0 0 0 0 0 8 41 0 0 0 0 0 0 0 (173) CYS174 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (174) ILE175 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (221) VAL222 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (222) ARG223 0 0 0 2 10 12 0 0 0 0 0 0 0 0 (223) THR224 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (224) TYR225 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (263) ARG264 0 0 0 0 0 3 0 8 9 8 0 0 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMEgryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldqtvvagfgciyvdeslfragilpgrpaaslsskeierlheemvatigeavmkggstvRtyvntqgeagtfqhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3jr9_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP OPTIMAL BINDING SEQUENCE F2 organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DA(D11):DT(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DT(D17):DA(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 11 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 13 0 0 0 0 0 ( 87) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >3jr9_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP OPTIMAL BINDING SEQUENCE F2 organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DA(D11):DT(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DT(D17):DA(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainB ( 75) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 13 0 0 0 0 0 ( 87) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 prot.sequence mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >3jra_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP NON CONSENSUS SEQUENCE DNA F6 organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DA(D7):DT(C21) DG(D8):DC(C20) DT(D9):DA(C19) DT(D10):DA(C18) DA(D11):DT(C17) DA(D12):DT(C16) DG(D13):DC(C15) DA(D14):DT(C14) DA(D15):DT(C13) DA(D16):DT(C12) DT(D17):DA(C11) DG(D18):DC(C10) DA(D19):DT(C9) DC(D20):DG(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 10 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >3jra_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP NON CONSENSUS SEQUENCE DNA F6 organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DA(D7):DT(C21) DG(D8):DC(C20) DT(D9):DA(C19) DT(D10):DA(C18) DA(D11):DT(C17) DA(D12):DT(C16) DG(D13):DC(C15) DA(D14):DT(C14) DA(D15):DT(C13) DA(D16):DT(C12) DT(D17):DA(C11) DG(D18):DC(C10) DA(D19):DT(C9) DC(D20):DG(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 10 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 13 0 0 0 0 0 ( 87) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >3jrb_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F24 CONTAINING T-TRACT AT CENTER organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DA(D11):DT(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DA(D15):DT(C13) DA(D16):DT(C12) DC(D17):DG(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 5 6 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS90 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlrKklkkygmn >3jrb_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F24 CONTAINING T-TRACT AT CENTER organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DT(C12):DA(D16) DT(C13):DA(D15) DT(C14):DA(D14) DT(C15):DA(D13) DT(C16):DA(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 68) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 6 5 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 83) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 5 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) THR87 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlrKklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >3jrc_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F29 CONTAINING 5 G/CS AT CENTER organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DA(D11):DT(C17) DG(D12):DC(C16) DC(D13):DG(C15) DG(D14):DC(C14) DC(D15):DG(C13) DC(D16):DG(C12) DC(D17):DG(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 14 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 13 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >3jrc_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F29 CONTAINING 5 G/CS AT CENTER organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DG(C12):DC(D16) DG(C13):DC(D15) DC(C14):DG(D14) DG(C15):DC(D13) DC(C16):DG(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainB ( 75) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 13 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >3jrd_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F25 CONTAINING T2A3 SEQUENCE AT CENTER organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DT(C12):DA(D16) DT(C13):DA(D15) DA(C14):DT(D14) DA(C15):DT(D13) DA(C16):DT(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 68) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 7 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >3jrd_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F25 CONTAINING T2A3 SEQUENCE AT CENTER organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DT(C12):DA(D16) DT(C13):DA(D15) DA(C14):DT(D14) DA(C15):DT(D13) DA(C16):DT(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 68) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 7 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 10 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >3jre_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F26 CONTAINING A-TRACT AT CENTER organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DA(C12):DT(D16) DA(C13):DT(D15) DA(C14):DT(D14) DA(C15):DT(D13) DA(C16):DT(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 68) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 10 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >3jre_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F26 CONTAINING A-TRACT AT CENTER organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DA(D11):DT(C17) DT(D12):DA(C16) DT(D13):DA(C15) DT(D14):DA(C14) DT(D15):DA(C13) DT(D16):DA(C12) DC(D17):DG(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 10 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 7 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >3jrf_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F27 CONTAINING A C/G AT CENTER organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DA(D11):DT(C17) DA(D12):DT(C16) DA(D13):DT(C15) DG(D14):DC(C14) DT(D15):DA(C13) DT(D16):DA(C12) DC(D17):DG(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 11 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS90 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlrKklkkygmn >3jrf_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F27 CONTAINING A C/G AT CENTER organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DA(C12):DT(D16) DA(C13):DT(D15) DC(C14):DG(D14) DT(C15):DA(D13) DT(C16):DA(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 68) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 11 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 83) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 10 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlrKklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >3jrg_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP NON CONSENSUS SEQUENCE DNA F18 organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DG(D10):DC(C18) DA(D11):DT(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DC(D17):DG(C11) DC(D18):DG(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 16 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >3jrg_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP NON CONSENSUS SEQUENCE DNA F18 organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DG(D10):DC(C18) DA(D11):DT(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DC(D17):DG(C11) DC(D18):DG(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 16 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 11 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >3jrh_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP NON CONSENSUS SEQUENCE DNA F21 organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DC(D11):DG(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DG(D17):DC(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 13 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >3jrh_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP NON CONSENSUS SEQUENCE DNA F21 organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DC(C11):DG(D17) DA(C12):DT(D16) DA(C13):DT(D15) DT(C14):DA(D14) DT(C15):DA(D13) DT(C16):DA(D12) DG(C17):DC(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 68) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 13 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 9 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >3jri_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP NON CONSENSUS SEQUENCE DNA F23 organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DA(D10):DT(C18) DC(D11):DG(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DA(D17):DT(C11) DC(D18):DG(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 13 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS90 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 9 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 ( 90) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRKklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRKklkkygmn >3jri_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP NON CONSENSUS SEQUENCE DNA F23 organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DG(C10):DC(D18) DT(C11):DA(D17) DA(C12):DT(D16) DA(C13):DT(D15) DT(C14):DA(D14) DT(C15):DA(D13) DT(C16):DA(D12) DG(C17):DC(D11) DT(C18):DA(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainB ( 75) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 9 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) LYS90 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRKklkkygmn >3jsm_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=K65R MUTANT HIV-1 REVERSE TRANSCRIPTASE CROSS-LINKED TO DS-DNA AND COMPLEXED WITH TENOFOVIR-DIPHOSPHATE AS THE INCOMING NUCLEOTIDE SUBSTRATE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (448) ARG448 0 1 11 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikrkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >3jsm_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=K65R MUTANT HIV-1 REVERSE TRANSCRIPTASE CROSS-LINKED TO DS-DNA AND COMPLEXED WITH TENOFOVIR-DIPHOSPHATE AS THE INCOMING NUCLEOTIDE SUBSTRATE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 94) ILE94 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 11 1 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikrkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgipHpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymDdlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3jso_AB:LexA/Signal_peptidase;"Winged_helix"_DNA-binding_domain; title=CLASSIC PROTEIN WITH A NEW TWIST: CRYSTAL STRUCTURE OF A LEXA REPRESSOR DNA COMPLEX organism=Escherichia coli K-12 DNA sequence DT(D3):DA(C22) DA(D4):DT(C21) DC(D5):DG(C20) DT(D6):DA(C19) DG(D7):DC(C18) DT(D8):DA(C17) DA(D9):DT(C16) DT(D10):DA(C15) DA(D11):DT(C14) DT(D12):DA(C13) DA(D13):DT(C12) DT(D14):DA(C11) DA(D15):DT(C10) DT(D16):DA(C9) DA(D17):DT(C8) DC(D18):DG(C7) DA(D19):DT(C6) DG(D20):DC(C5) DT(D21):DA(C4) DA(D22):DT(C3) chainA ( 27) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 9 0 0 0 ( 39) PRO40 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 40) ASN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 7 1 0 0 ( 41) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 43) GLU44 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 ( 44) GLU45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 chainB ( 27) ARG28 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 8 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO40 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ASN41 0 0 1 9 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ALA42 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLU44 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLU45 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaltarqqevfdlirdhisqtgmpptRaeiaqrlgfrSPNAaEEhlkalarkgvieivsgasrgirllglplvgrvaageplieghyqvdpslfkpnadfllrvsgmsmkdigimdgdllavhktqdvrngqvvvariddevtvarlkkqgnkvellpensefkpivvdlrqqsftieglavgvirng/kaltarqqevfdlirdhisqtgmpptRaeiaqrlgfrSPNAaEEhlkalarkgvieivsgasrgirllglplvgrvaageieghyqvdpslfkpnadfllrvsgmsmkdigimdgdllavhktqdvrngqvvvariddevtvarlkkqgnkvellpensefkpivvdlrqqsftieglavgvirngdwl >3jso_B:LexA/Signal_peptidase;"Winged_helix"_DNA-binding_domain; title=CLASSIC PROTEIN WITH A NEW TWIST: CRYSTAL STRUCTURE OF A LEXA REPRESSOR DNA COMPLEX organism=Escherichia coli K-12 DNA sequence DT(D3):DA(C22) DA(D4):DT(C21) DC(D5):DG(C20) DT(D6):DA(C19) DG(D7):DC(C18) DT(D8):DA(C17) DA(D9):DT(C16) DT(D10):DA(C15) DA(D11):DT(C14) DT(D12):DA(C13) DA(D13):DT(C12) DT(D14):DA(C11) DA(D15):DT(C10) DT(D16):DA(C9) DA(D17):DT(C8) DC(D18):DG(C7) DA(D19):DT(C6) DG(D20):DC(C5) DT(D21):DA(C4) DA(D22):DT(C3) chainB ( 27) ARG28 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 8 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO40 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ASN41 0 0 1 9 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ALA42 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLU44 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLU45 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaltarqqevfdlirdhisqtgmpptRaeiaqrlgfrSPNAaEEhlkalarkgvieivsgasrgirllglplvgrvaageieghyqvdpslfkpnadfllrvsgmsmkdigimdgdllavhktqdvrngqvvvariddevtvarlkkqgnkvellpensefkpivvdlrqqsftieglavgvirngdwl >3jsp_A:LexA/Signal_peptidase;"Winged_helix"_DNA-binding_domain; title=CLASSIC PROTEIN WITH A NEW TWIST: CRYSTAL STRUCTURE OF A LEXA REPRESSOR DNA COMPLEX organism=Escherichia coli K-12 DNA sequence DT(D3):DA(C22) DA(D4):DT(C21) DC(D5):DG(C20) DT(D6):DA(C19) DG(D7):DC(C18) DT(D8):DA(C17) DA(D9):DT(C16) DT(D10):DA(C15) DG(D11):DC(C14) DC(D12):DG(C13) DG(D13):DC(C12) DC(D14):DG(C11) DA(D15):DT(C10) DT(D16):DA(C9) DA(D17):DT(C8) DC(D18):DG(C7) DA(D19):DT(C6) DG(D20):DC(C5) DT(D21):DA(C4) DA(D22):DT(C3) chainA ( 27) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 10 0 0 0 ( 39) PRO40 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 40) ASN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 8 1 0 0 ( 41) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 43) GLU44 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 ( 44) GLU45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 prot.sequence kaltarqqevfdlirdhisqtgmpptRaeiaqrlgfrSPNAaEEhlkalarkgvieivsgasrgirllqglplvgrvaagepllaqqhieghyqvdpslfkpnadfllrvsgmsmkdigimdgdllavhktqdvrngqvvvariddevtvarlkkqgnkvellpensefkpivvdlrqqsftieglavgvirng >3jsp_AB:LexA/Signal_peptidase;"Winged_helix"_DNA-binding_domain; title=CLASSIC PROTEIN WITH A NEW TWIST: CRYSTAL STRUCTURE OF A LEXA REPRESSOR DNA COMPLEX organism=Escherichia coli K-12 DNA sequence DT(C3):DA(D22) DA(C4):DT(D21) DC(C5):DG(D20) DT(C6):DA(D19) DG(C7):DC(D18) DT(C8):DA(D17) DA(C9):DT(D16) DT(C10):DA(D15) DG(C11):DC(D14) DC(C12):DG(D13) DG(C13):DC(D12) DC(C14):DG(D11) DA(C15):DT(D10) DT(C16):DA(D9) DA(C17):DT(D8) DC(C18):DG(D7) DA(C19):DT(D6) DG(C20):DC(D5) DT(C21):DA(D4) DA(C22):DT(D3) chainA ( 27) ARG28 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 10 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO40 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ASN41 0 0 1 8 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ALA42 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLU44 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLU45 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 27) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 10 0 0 0 ( 40) ASN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 7 1 0 0 ( 41) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 43) GLU44 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 ( 44) GLU45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 7 0 0 prot.sequence kaltarqqevfdlirdhisqtgmpptRaeiaqrlgfrSPNAaEEhlkalarkgvieivsgasrgirllqglplvgrvaagepllaqqhieghyqvdpslfkpnadfllrvsgmsmkdigimdgdllavhktqdvrngqvvvariddevtvarlkkqgnkvellpensefkpivvdlrqqsftieglavgvirng/kaltarqqevfdlirdhisqtgmpptRaeiaqrlgfrSpNAaEEhlkalarkgvieivsgasrgirllqeglplvgrvlaqqhieghyqvdpslfkpnadfllrvsgmsmkdigimdgdllavhktqdvrngqvvvariddevtvarlkkqgnkvellpensefkpivvdlrqqsftieglavgvirngdwl >3jtg_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MOUSE ELF3 C-TERMINAL DNA-BINDING DOMAIN IN COMPLEX WITH TYPE II TGF-BETA RECEPTOR PROMOTER DNA organism=Mus musculus DNA sequence DA(C102):DT(B16) DA(C103):DT(B15) DA(C104):DT(B14) DC(C105):DG(B13) DA(C106):DT(B12) DG(C107):DC(B11) DG(C108):DC(B10) DA(C109):DT(B9) DA(C110):DT(B8) DA(C111):DT(B7) DC(C112):DG(B6) DT(C113):DA(B5) DC(C114):DG(B4) DC(C115):DG(B3) DT(C116):DA(B2) chainA ( 56) GLU327 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 ( 57) LYS328 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 60) ARG331 0 0 0 0 0 21 18 10 0 0 0 0 0 0 0 ( 61) ALA332 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 63) ARG334 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 ( 64) TYR335 0 0 0 0 0 0 1 6 8 6 0 0 0 0 0 ( 78) ARG349 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gthlwefirdilihpelneglmkwenrhegvfkflrseavaqlwgqkkknsnmtyEKlsRAmRYyykreilervdgrRlvykfgknssgwkeeev >3jx7_A:ARM_repeat; title=BACILLUS CEREUS ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING A 3-METHYLADENINE ANALOG organism=Bacillus cereus DNA sequence DC(C13):DG(B12) DC(C14):DG(B11) DC(C15):DG(B10) DG(C16):DC(B9) DT(C17):DA(B8) DT(C18):DZM(B7) DA(C19):DT(B6) DG(C20):DC(B5) DT(C21):DA(B4) DC(C22):DG(B3) DC(C23):DG(B2) DG(C24):DC(B1) chainA ( 28) TYR27 0 0 0 0 0 2 8 0 0 0 0 0 (110) TRP109 0 0 0 0 0 6 0 0 0 0 0 0 (184) LYS183 0 0 0 0 0 0 2 0 0 0 0 0 (216) ARG215 0 0 0 0 0 0 0 0 0 0 3 0 prot.sequence pmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswWdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskReaikhikqnyginnek >3jxb_C:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH SYNTHETIC OPERATOR 9C organism=Enterobacteria phage P22 DNA sequence DC(A1):DG(B40) DA(A2):DT(B39) DT(A3):DA(B38) DT(A4):DA(B37) DT(A5):DA(B36) DA(A6):DT(B35) DA(A7):DT(B34) DG(A8):DC(B33) DA(A9):DT(B32) DC(A10):DG(B31) DG(A11):DC(B30) DT(A12):DA(B29) DC(A13):DG(B28) DT(A14):DA(B27) DT(A15):DA(B26) DA(A16):DT(B25) DA(A17):DT(B24) DA(A18):DT(B23) DT(A19):DA(B22) DA(A20):DT(B21) chainC ( 20) GLN21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 30) SER31 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 31) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 32) VAL33 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 6 2 0 0 0 ( 33) ALA34 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 35) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 ( 36) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 7 9 1 0 0 0 0 0 ( 39) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 prot.sequence ntqlmgerirarrkklkirQaalgkmvgvSNVAiSQweRsETepngenllalskalqcspdyllkgd >3jxb_CD:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH SYNTHETIC OPERATOR 9C organism=Enterobacteria phage P22 DNA sequence DC(A1):DG(B40) DA(A2):DT(B39) DT(A3):DA(B38) DT(A4):DA(B37) DT(A5):DA(B36) DA(A6):DT(B35) DA(A7):DT(B34) DG(A8):DC(B33) DA(A9):DT(B32) DC(A10):DG(B31) DG(A11):DC(B30) DT(A12):DA(B29) DC(A13):DG(B28) DT(A14):DA(B27) DT(A15):DA(B26) DA(A16):DT(B25) DA(A17):DT(B24) DA(A18):DT(B23) DT(A19):DA(B22) DA(A20):DT(B21) chainC ( 20) GLN21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 30) SER31 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 31) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 32) VAL33 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 6 2 0 0 0 ( 33) ALA34 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 35) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 ( 36) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 7 9 1 0 0 0 0 0 ( 39) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 chainD ( 18) GLN21 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER31 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN32 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) VAL33 0 0 0 3 6 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER36 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) GLN37 0 0 0 0 0 1 9 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG40 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR43 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntqlmgerirarrkklkirQaalgkmvgvSNVAiSQweRsETepngenllalskalqcspdyllkgd/qlmgerirarrkklkirQaalgkmvgvSNVaiSQweRsETepngenllalskalqcspdyllkgd >3jxc_LR:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH SYNTHETIC OPERATOR 9T IN THE PRESENCE OF TL+ organism=Enterobacteria phage P22 DNA sequence DC(B1):DG(A40) DA(B2):DT(A39) DT(B3):DA(A38) DT(B4):DA(A37) DT(B5):DA(A36) DA(B6):DT(A35) DA(B7):DT(A34) DG(B8):DC(A33) DA(B9):DT(A32) DT(B10):DA(A31) DA(B11):DT(A30) DT(B12):DA(A29) DC(B13):DG(A28) DT(B14):DA(A27) DT(B15):DA(A26) DA(B16):DT(A25) DA(B17):DT(A24) DA(B18):DT(A23) DT(B19):DA(A22) DG(B20):DC(A21) chainL ( 19) GLN21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 29) SER31 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 30) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 31) VAL33 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 6 3 0 0 0 ( 32) ALA34 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 34) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 ( 35) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 7 9 1 0 0 0 0 0 ( 38) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 41) THR43 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 chainR ( 19) GLN21 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER31 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN32 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) VAL33 0 0 0 2 5 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ALA34 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER36 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN37 0 0 0 0 0 1 9 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG40 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR43 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tqlmgerirarrkklkirQaalgkmvgvSNVAiSQweRsETepngenllalskalqcspdyllkgd/tqlmgerirarrkklkirQaalgkmvgvSNVAiSQweRsETepngenllalskalqcspdyllkgd >3jxc_R:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH SYNTHETIC OPERATOR 9T IN THE PRESENCE OF TL+ organism=Enterobacteria phage P22 DNA sequence DC(B1):DG(A40) DA(B2):DT(A39) DT(B3):DA(A38) DT(B4):DA(A37) DT(B5):DA(A36) DA(B6):DT(A35) DA(B7):DT(A34) DG(B8):DC(A33) DA(B9):DT(A32) DT(B10):DA(A31) DA(B11):DT(A30) DT(B12):DA(A29) DC(B13):DG(A28) DT(B14):DA(A27) DT(B15):DA(A26) DA(B16):DT(A25) DA(B17):DT(A24) DA(B18):DT(A23) DT(B19):DA(A22) DG(B20):DC(A21) chainR ( 19) GLN21 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER31 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN32 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) VAL33 0 0 0 2 5 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ALA34 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER36 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN37 0 0 0 0 0 1 9 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG40 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR43 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tqlmgerirarrkklkirQaalgkmvgvSNVAiSQweRsETepngenllalskalqcspdyllkgd >3jxd_L:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH SYNTHETIC OPERATOR 9C IN THE PRESENCE OF RB+ organism=Enterobacteria phage P22 DNA sequence DC(B1):DG(A40) DA(B2):DT(A39) DT(B3):DA(A38) DT(B4):DA(A37) DT(B5):DA(A36) DA(B6):DT(A35) DA(B7):DT(A34) DG(B8):DC(A33) DA(B9):DT(A32) DC(B10):DG(A31) DG(B11):DC(A30) DT(B12):DA(A29) DC(B13):DG(A28) DT(B14):DA(A27) DT(B15):DA(A26) DA(B16):DT(A25) DA(B17):DT(A24) DA(B18):DT(A23) DT(B19):DA(A22) DG(B20):DC(A21) chainL ( 19) GLN21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 29) SER31 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 ( 30) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 31) VAL33 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 6 2 0 0 0 ( 32) ALA34 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 34) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 ( 35) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 7 9 1 0 0 0 0 0 ( 38) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 40) GLU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 41) THR43 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 prot.sequence tqlmgerirarrkklkirQaalgkmvgvSNVAiSQweRsETepngenllalskalqcspdyllkgd >3jxd_LR:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH SYNTHETIC OPERATOR 9C IN THE PRESENCE OF RB+ organism=Enterobacteria phage P22 DNA sequence DC(A21):DG(B20) DA(A22):DT(B19) DT(A23):DA(B18) DT(A24):DA(B17) DT(A25):DA(B16) DA(A26):DT(B15) DA(A27):DT(B14) DG(A28):DC(B13) DA(A29):DT(B12) DC(A30):DG(B11) DG(A31):DC(B10) DT(A32):DA(B9) DC(A33):DG(B8) DT(A34):DA(B7) DT(A35):DA(B6) DA(A36):DT(B5) DA(A37):DT(B4) DA(A38):DT(B3) DT(A39):DA(B2) DG(A40):DC(B1) chainL ( 19) GLN21 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER31 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN32 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) VAL33 0 0 0 2 6 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ALA34 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER36 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN37 0 0 0 0 0 1 9 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG40 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLU42 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR43 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 chainR ( 19) GLN21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 29) SER31 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 30) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 31) VAL33 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 6 2 0 0 0 ( 32) ALA34 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 34) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 ( 35) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 9 10 1 0 0 0 0 0 ( 38) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 41) THR43 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 prot.sequence tqlmgerirarrkklkirQaalgkmvgvSNVAiSQweRsETepngenllalskalqcspdyllkgd/tqlmgerirarrkklkirQaalgkmvgvSNVAiSQweRsETepngenllalskalqcspdyllkgd >3jxy_A:ARM_repeat; title=BACILLUS CEREUS ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING A GT MISMATCH organism=Bacillus cereus DNA sequence DC(C1):DG(B12) DC(C2):DG(B11) DC(C3):DG(B10) DG(C4):DC(B9) DT(C5):DA(B8) DT(C6):DG(B7) DA(C7):DT(B6) DG(C8):DC(B5) DT(C9):DA(B4) DC(C10):DG(B3) DC(C11):DG(B2) DG(C12):DC(B1) chainA ( 28) TYR27 0 0 0 0 0 4 8 0 0 0 0 0 (110) TRP109 0 0 0 0 0 5 0 0 0 0 0 0 (184) LYS183 0 0 0 0 0 0 2 0 0 0 0 0 (216) ARG215 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence pmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswWdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskReaikhikqnyginne >3jxz_A:ARM_repeat; title=BACILLUS CEREUS ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING AN ABASIC SITE (ACROSS FROM T) organism=Bacillus cereus DNA sequence DA(C12):DT(B10) DA(C13):DT(B9) DG(C14):DC(B8) DC(C15):DG(B7) DC(C16):DG(B6) DC(C18):DG(B4) DC(C19):DG(B3) DC(C20):DG(B2) chainA ( 27) TYR27 0 0 0 0 0 5 0 0 (183) LYS183 0 0 0 0 0 0 2 0 (215) ARG215 0 0 0 0 0 0 0 1 (219) LYS219 0 0 0 0 0 1 4 5 prot.sequence mhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskREaiKhikqny >3jy1_A:ARM_repeat; title=BACILLUS CEREUS ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING AN ABASIC SITE (ACROSS FROM C) organism=Bacillus cereus DNA sequence DG(B2):DC(C20) DG(B3):DC(C19) DG(B4):DC(C18) DG(B6):DC(C16) DG(B7):DC(C15) DC(B8):DG(C14) DT(B9):DA(C13) DT(B10):DA(C12) chainA ( 28) TYR27 0 0 5 0 0 0 0 0 (184) LYS183 0 1 0 0 0 0 0 0 (216) ARG215 3 0 0 0 0 0 0 0 (220) LYS219 5 4 0 0 0 0 0 0 prot.sequence pmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskREaiKhikqny >3jyt_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=K65R MUTANT HIV-1 REVERSE TRANSCRIPTASE CROSS-LINKED TO DS-DNA AND COMPLEXED WITH DATP AS THE INCOMING NUCLEOTIDE SUBSTRATE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 94) ILE94 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikrkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgipHpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymDdlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3k0s_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF E.COLI DNA MISMATCH REPAIR PROTEIN MUTS, D693N MUTANT, IN COMPLEX WITH GT MISMATCHED DNA organism=Escherichia coli DNA sequence DA(F14):DT(E17) DC(F15):DG(E16) DT(F16):DA(E15) DG(F17):DC(E14) DG(F18):DC(E13) DT(F19):DA(E12) DG(F20):DC(E11) DC(F21):DG(E10) DT(F22):DG(E9) DT(F23):DA(E8) DG(F24):DC(E7) DG(F25):DC(E6) DC(F26):DG(E5) DA(F27):DT(E4) DG(F28):DC(E3) DC(F29):DG(E2) DT(F30):DA(E1) chainA ( 32) MET33 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 0 50 18 0 0 0 0 0 0 0 ( 37) GLU38 0 0 0 0 0 0 0 4 13 0 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 1 9 2 0 0 0 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 chainB prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgDFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvfmvemtetanilhnateyslvlmneigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/lrlkaqhpeillfyrmgdfyelfyddakrasQlLDiSltpmagipyhavenylaklVnqgesvaicEqerKvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgstfmvemtetanilhnateyslvlmneigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >3k4x_A:DNA_clamp; title=EUKARYOTIC SLIDING CLAMP PCNA BOUND TO DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(B1):DG(C14) DC(B2):DG(C13) DC(B3):DG(C12) DA(B4):DT(C11) DT(B5):DA(C10) DC(B6):DG(C9) DG(B7):DC(C8) DT(B8):DA(C7) DA(B9):DT(C6) DT(B10):DA(C5) chainA ( 79) ARG80 0 0 0 0 0 0 0 0 0 1 (654) ARG683 0 0 0 0 0 0 0 0 0 2 prot.sequence leakfeeaslfkriidgfkdcvqlvnfqckedgiiaqavddsrvllvsleigveafqeyrcdhpvtlgmdltslskilRcgnntdtltliadntpdsiillfedtkkdriaeyslklmdidadflkieelqydstlslpssefskivrdlsqlsdsinimitketikfvadgdigsgsviikpfvdmehpetsiklemdqpvdltfgakylldiikgsslsdrvgirlsseapalfqfdlksgflqfflapkleakfeeaslfkriidgfkdcvqlvnfqckedgiiaqavddsrvllvsleigveafqeyrcdhpvtlgmdltslskilrcgnntdtltliadntpdsiillfedtkkdriaeyslklmdidadflkieelqydstlslpssefskivrdlsqlsdsinimitketikfvadgdigsgsviikpfvdmehpetsiklemdqpvdltfgakylldiikgsslsdrvgirlsseapalfqfdlksgflqfflapkfnleakfeeaslfkriidgfkdcvqlvnfqckedgiiaqavddsrvllvsleigveafqeyrcdhpvtlgmdltslskilrcgnntdtltliadntpdsiillfedtkkdriaeyslklmdidadflkieelqydstlslpssefskivRdlsqlsdsinimitketikfvadgdigsgsviikpfvdmehpetsiklemdqpvdltfgakylldiikgsslsdrvgirlsseapalfqfdlksgflqfflapk >3k57_A:Ribonuclease_H-like;DNA/RNA_polymerases; title=CRYSTAL STRUCTURE OF E.COLI POL II-NORMAL DNA-DATP TERNARY COMPLEX organism=Escherichia coli DNA sequence DT(T806):DA(P912) DA(T807):DT(P911) DC(T808):DG(P910) DG(T809):DC(P909) DC(T810):DG(P908) DT(T811):DA(P907) DA(T812):DT(P906) DG(T813):DC(P905) DG(T814):DC(P904) DC(T815):DG(P903) DA(T816):DT(P902) DC(T817):DG(P901) chainA (617) LYS615 7 5 0 0 0 0 0 0 0 0 0 0 (640) ARG638 0 0 9 6 0 0 0 0 0 0 0 0 (691) ARG689 0 0 2 4 0 0 0 0 0 0 0 0 (700) ASN698 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence phmaqagfiltrhwrdtpqgtevsfwlatdngplqvtlapqesvafipadqvpraqhilqgeqgfrltplalkdfhrqpvyglycrahrqlmnyekrlreggvtvyeadvrpperylmerfitspvwvegdmhngtivnarlkphpdyrpplkwvsidiettrhgelyciglegcgqrivymlgpengdassldfeleyvasrpqlleklnawfanydpdviigwnvvqfdlrmlqkhaeryrlplrlgrdnselewrehgfkngvffaqakgrliidgiealksafwnfssfsletvaqellgegksidnpwdrmdeidrrfaedkpalatynlkncelvtqifhkteimpflleratvnglpvdrhggsvaafghlyfprmhragyvapnlgevpphaspggyvmdsrpglydsvlvldykslypsiirtflidpvglvegmaqpdpehstegfldawfsrekhclpeivtniwhgrdeakrqgnkplsqalkiimnafygvlgttacrffdprlassitmrghqimrqtkalieaqgydviygdtdstfvwlkgahseeeaakigralvqhvnawwaetlqkqrltsaleleyethfcrflmptirgadtgskKryagliqegdkqrmvfkgletvRtdwtplaqqfqqelylrifrnepyqeyvretidklmageldarlvyrkrlRrplseyqrNvpphvraarladeenqkrgrplqyqnrgtikyvwttngpepldyqrspldyehyltrqlqpvaegilpfiednfatlmtgql >3k58_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF E.COLI POL II-NORMAL DNA-DTTP TERNARY COMPLEX organism=Escherichia coli DNA sequence DG(P901):DC(T817) DT(P902):DA(T816) DG(P903):DC(T815) DC(P904):DG(T814) DC(P905):DG(T813) DT(P906):DA(T812) DA(P907):DT(T811) DG(P908):DC(T810) DC(P909):DG(T809) DG(P910):DC(T808) DT(P911):DA(T807) DA(P912):DT(T806) DOC(P913):DG(T805) TTP(A914):DA(T804) chainA (369) SER369 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (419) ASP419 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (421) LYS421 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (422) SER422 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (423) LEU423 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (424) TYR424 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (425) PRO425 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (477) ARG477 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (493) LYS493 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (494) ILE494 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (497) ASN497 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (498) ALA498 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (500) TYR500 0 0 0 0 0 0 0 0 0 0 0 0 2 4 (547) ASP547 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (593) GLU593 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (615) LYS615 0 0 0 0 0 0 0 0 0 0 5 8 0 0 (638) ARG638 0 0 0 0 0 0 0 0 7 9 0 0 0 0 (689) ARG689 0 0 0 0 0 0 0 0 4 2 0 0 0 0 (698) ASN698 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence phmaqagfiltrhwrdtpqgtevsfwlatdngplqvtlapqesvafipadqvpraqhilqgeqgfrltplalkdfhrqpvyglycrahrqlmnyekrlreggvtvyeadvrpperylmerfitspvwvegdmhngtivnarlkphpdyrpplkwvsidiettrhgelyciglegcgqrivymlgpengdassldfeleyvasrpqlleklnawfanydpdviigwnvvqfdlrmlqkhaeryrlplrlgrdnselewrehgfkngvffaqakgrliidgiealksafwnfssfsletvaqellgegksnpwdrmdeidrrfaedkpalatynlkncelvtqifhkteimpflleratvnglpvdrhggSvaafghlyfprmhragyvapnlgevpphaspggyvmdsrpglydsvlvldykslypsiirtflidpvglvegmaqpdpehstegfldawfsrekhclpeivtniwhgrdeakrqgnkplsqalkIimNAfYgvlgttacrffdprlassitmrghqimrqtkalieaqgydviygdtdstfvwlkgahseeeaakigralvqhvnawwaetlqkqrltsaleleyethfcrflmptirgadtgskKryagliqegdkqrmvfkgletvRtdwtplaqqfqqelylrifrnepyqeyvretidklmageldarlvyrkrlRrplseyqrNvpphvraarladeenqkrgrplqyqnrgtikyvwttngpepldyqrspldyehyltrqlqpvaegilpfiednfatlmtglf >3k59_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF E.COLI POL II-NORMAL DNA-DCTP TERNARY COMPLEX organism=Escherichia coli DNA sequence DT(T806):DA(P912) DA(T807):DT(P911) DC(T808):DG(P910) DG(T809):DC(P909) DC(T810):DG(P908) DT(T811):DA(P907) DA(T812):DT(P906) DG(T813):DC(P905) DG(T814):DC(P904) DC(T815):DG(P903) DA(T816):DT(P902) DC(T817):DG(P901) chainA (616) LYS615 7 5 0 0 0 0 0 0 0 0 0 0 (639) ARG638 0 0 9 5 0 0 0 0 0 0 0 0 (690) ARG689 0 0 2 5 0 0 0 0 0 0 0 0 (699) ASN698 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence phmaqagfiltrhwrdtpqgtevsfwlatdngplqvtlapqesvafipadqvpraqhilqgeqgfrltplalkdfhrqpvyglycrahrqlmnyekrlreggvtvyeadvrpperylmerfitspvwvegdmhngtivnarlkphpdyrpplkwvsidiettrhgelyciglegcgqrivymlgpengdassldfeleyvasrpqlleklnawfanydpdviigwnvvqfdlrmlqkhaeryrlplrlgrdnselewrehgfkngvffaqakgrliidgiealksafwnfssfsletvaqellgegksdnpwdrmdeidrrfaedkpalatynlkncelvtqifhkteimpflleratvnglpvdrhggsvaafghlyfprmhragyvapnlgevpphaspggyvmdsrpglydsvlvldykslypsiirtflidpvglvegmaqpdpehstegfldawfsrekhclpeivtniwhgrdeakrqgnkplsqalkiimnafygvlgttacrffdprlassitmrghqimrqtkalieaqgydviygdtdstfvwlkgahseeeaakigralvqhvnawwaetlqkqrltsaleleyethfcrflmptirgadtgskKryagliqegdkqrmvfkgletvRtdwtplaqqfqqelylrifrnepyqeyvretidklmageldarlvyrkrlRrplseyqrNvpphvraarladeenqkrgrplqyqnrgtikyvwttngpepldyqrspldyehyltrqlqpvaegilpfiednfatlmtgql >3k5l_A:Ribonuclease_H-like;DNA/RNA_polymerases; title=CRYSTAL STRUCTURE OF E.COLI POL II-ABASIC DNA-DATP LT(0, 3) TERNARY COMPLEX organism=Escherichia coli DNA sequence DG(P901):DC(T817) DT(P902):DA(T816) DG(P903):DC(T815) DC(P904):DG(T814) DC(P905):DG(T813) DT(P906):DA(T812) DA(P907):DT(T811) DG(P908):DC(T810) DC(P909):DG(T809) DG(P910):DC(T808) DT(P911):DA(T807) DA(P912):DT(T806) chainA (618) LYS615 0 0 0 0 0 0 0 0 0 0 5 6 (641) ARG638 0 0 0 0 0 0 0 0 6 9 0 0 (692) ARG689 0 0 0 0 0 0 0 0 4 2 0 0 (701) ASN698 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence gphmaqagfiltrhwrdtpqgtevsfwlatdngplqvtlapqesvafipadqvpraqhilqgeqgfrltplalkdfhrqpvyglycrahrqlmnyekrlreggvtvyeadvrpperylmerfitspvwvegdmhngtivnarlkphpdyrpplkwvsidiettrhgelyciglegcgqrivymlgpengdassldfeleyvasrpqlleklnawfanydpdviigwnvvqfdlrmlqkhaeryrlplrlgrdnselewrehgfkngvffaqakgrliidgiealksafwnfssfsletvaqellgegksidnpwdrmdeidrrfaedkpalatynlkncelvtqifhkteimpflleratvnglpvdrhggsvaafghlyfprmhragyvapnlgevpphaspggyvmdsrpglydsvlvldykslypsiirtflidpvglvegmaqpdpehstegfldawfsrekhclpeivtniwhgrdeakrqgnkplsqalkiimnafygvlgttacrffdprlassitmrghqimrqtkalieaqgydviygdtdstfvwlkgahseeeaakigralvqhvnawwaetlqkqrltsaleleyethfcrflmptirgadtgskKryagliqegdkqrmvfkgletvRtdwtplaqqfqqelylrifrnepyqeyvretidklmageldarlvyrkrlRrplseyqrNvpphvraarladeenqkrgrplqyqnrgtikyvwttngpepldyqrspldyehyltrqlqpvaegilpfiednfatlmtg >3k5m_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF E.COLI POL II-ABASIC DNA-DDGTP LT(-2, 2) TERNARY COMPLEX organism=Escherichia coli DNA sequence DG(P901):DC(T817) DT(P902):DA(T816) DG(P903):DC(T815) DC(P904):DG(T814) DC(P905):DG(T813) DT(P906):DA(T812) DA(P907):DT(T811) DG(P908):DC(T810) DC(P909):DG(T809) DG(P910):DC(T808) DT(P911):DA(T807) DA(P912):DT(T804) DG(P913):DC(T803) DG3(A914):DC(T802) chainA (367) SER369 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (417) ASP419 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (419) LYS421 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (420) SER422 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (421) LEU423 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (475) ARG477 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (479) LYS481 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (491) LYS493 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (492) ILE494 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (495) ASN497 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (496) ALA498 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (498) TYR500 0 0 0 0 0 0 0 0 0 0 0 0 2 7 (545) ASP547 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (613) LYS615 0 0 0 0 0 0 0 0 0 0 2 8 0 0 (614) ARG616 0 0 0 0 0 0 0 0 4 6 0 0 0 0 (636) ARG638 0 0 0 0 0 0 0 0 9 9 0 0 0 0 (687) ARG689 0 0 0 0 0 0 0 0 8 2 0 0 0 0 (696) ASN698 0 0 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence phmaqagfiltrhwrdtpqgtevsfwlatdngplqvtlapqesvafipadqvpraqhilqgeqgfrltplalkdfhrqpvyglycrahrqlmnyekrlreggvtvyeadvrpperylmerfitspvwvegdmhngtivnarlkphpdyrpplkwvsidiettrhgelyciglegcgqrivymlgpengdassldfeleyvasrpqlleklnawfanydpdviigwnvvqfdlrmlqkhaeryrlplrlgrdnselewrehkngffaqakgrliidgiealksafwnfssfsletvaqellgegsidnpwdrmdeidrrfaedkpalatynlkncelvtqifhkteimpflleratvnglpvdrhggSvaafghlyfprmhragyvapnlgevpphaspggyvmdsrpglydsvlvldykslypsiirtflidpvglvegmaqpdpehstegfldawfsrekhclpeivtniwhgrdeakrqgnkplsqalkIimnAfYgvlgttacrffdprlassitmrghqimrqtkalieaqgydviygdTdstfvwlkgahseeeaakigralvqhvnawwaetlqkqrltsaleleyethfcrflmptirgadtgskKRyagliqegdkqrmvfkgletvRtdwtplaqqfqqelylrifrnepyqeyvretidklmageldarlvyrkrlRrplseyqrNvpphvraarladeenqkrgrplqyqnrgtikyvwttngpepldyqrspldyehyltrqlqpvaegilpfied >3k5n_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF E.COLI POL II-ABASIC DNA BINARY COMPLEX organism=Escherichia coli DNA sequence DG(P901):DC(T819) DT(P902):DA(T818) DG(P903):DC(T817) DC(P904):DG(T816) DC(P905):DG(T815) DT(P906):DA(T814) DG(P908):DC(T812) DC(P909):DG(T811) DG(P910):DC(T810) DT(P911):DA(T809) DA(P912):DT(T808) chainA (276) PHE285 0 0 0 0 0 0 0 0 0 0 3 (614) ARG638 0 0 0 0 0 0 0 3 0 0 0 (665) ARG689 0 0 0 0 0 0 4 0 0 0 0 (674) ASN698 0 0 0 1 0 0 0 0 0 0 0 prot.sequence maqagfiltrhwrdtpqgtevsfwlatdngplqvtlapqesvafipadqvpraqhilqgeqgfrltplalkdfhrqpvyglycrahrqlmnyekrlreggvtvyeadvrpperylmerfitspvwvegdmhngtivnarlkphpdyrpplkwvsidiettrhgelyciglegcgqrivymlgpengdassldfeleyvasrpqlleklnawfanydpdviigwnvvqfdlrmlqkhaeryrlplrlgrdnselewffaqakgrliidgiealksaFwnfssfsletvaqellgegwdrmdeidrrfaedkpalatynlkncelvtqifhkteimpflleratvnglpvdrhggsvaafghlyfprmhragyvapnlgevpphaspggyvmdsrpglydsvlvldykslypsiirtflidpvglvegmaqpdpehstegfldawfsrekhclpeivtniwhgrdeakrqgnkplsqalkiimnafygvlgttacrffdprlassitmrghqimrqtkalieaqgydviygdtdstfvwlkgahseeeaakigralvqhvnawwaetlqkqrltsaleleyethfcrflmptkryagliqegdkqrmvfkgletvRtdwtplaqqfqqelylrifrnepyqeyvretidklmageldarlvyrkrlRrplseyqrNvpphvraarladeenqkrgrplqyqnrgtikyvwttngpepldyqrspldyehyltrqlqpvaegilpfiednfatlmtgqlglf >3k70_BCD:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF THE COMPLETE INITIATION COMPLEX OF RECBCD organism=ESCHERICHIA COLI K-12 DNA sequence DA(X11):DT(X45) DT(X12):DA(X44) DG(X13):DC(X43) DC(X14):DG(X42) DG(X15):DC(X41) DA(X16):DT(X40) DG(X17):DC(X39) DC(X18):DG(X38) DA(X19):DT(X37) DC(X20):DG(X36) DT(X21):DA(X35) DG(X22):DC(X34) DC(X23):DG(X33) DT(X24):DA(X32) DA(X25):DT(X31) chainB (249) ILE252 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (805) ARG824 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 chainC (1078) ASN1078 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1079) MET1079 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1080) MET1080 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1081) VAL1081 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence dvaetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldalessgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqrghgiaqdlmprldvdaagvasvveeptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryylldyksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag/mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfileglsryqinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegNMMVrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq/mklqkqlleavehkqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlenneashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlhrllgaqpqrlrhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasveagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrpsrlpehettwamtvhksqgsefdhaalilpsqrtpvvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss >3k70_EFG:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF THE COMPLETE INITIATION COMPLEX OF RECBCD organism=ESCHERICHIA COLI K-12 DNA sequence DA(Y11):DT(Y45) DT(Y12):DA(Y44) DG(Y13):DC(Y43) DC(Y14):DG(Y42) DG(Y15):DC(Y41) DA(Y16):DT(Y40) DG(Y17):DC(Y39) DC(Y18):DG(Y38) DA(Y19):DT(Y37) DC(Y20):DG(Y36) DT(Y21):DA(Y35) DG(Y22):DC(Y34) DC(Y23):DG(Y33) DT(Y24):DA(Y32) DA(Y25):DT(Y31) chainE (249) ILE252 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (805) ARG824 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 chainF (1078) ASN1078 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1079) MET1079 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1080) MET1080 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1081) VAL1081 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG prot.sequence dvaetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldalessgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqrghgiaqdlmprldvdaagvasvveeptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryylldyksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag/mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfileglsryqinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegNMMVrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq/mklqkqlleavehkqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlenneashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlhrllgaqpqrlrhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasveagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrpsrlpehettwamtvhksqgsefdhaalilpsqrtpvvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss >3k9f_AC:Type_II_DNA_topoisomerase; title=DETAILED STRUCTURAL INSIGHT INTO THE QUINOLONE-DNA CLEAVAGE COMPLEX OF TYPE IIA TOPOISOMERASES organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(E9):DG(F11) DA(E10):DT(F10) DT(E11):DA(F9) DG(E12):DC(F8) DA(E13):DT(F7) DA(E14):DT(F6) DT(E15):DA(F5) chainA ( 18) TYR20 0 0 0 0 1 0 0 ( 77) SER79 0 0 0 0 0 0 1 ( 78) SER80 0 0 0 0 0 1 1 (168) ILE170 0 0 14 10 0 0 0 chainC ( 44) LYS458 0 0 0 0 1 6 3 prot.sequence niqnmsledimgerfgrYskyiiqdralpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdSSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssle/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvdfsieanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskkgkkeevayawtdgeleelrkqfgkgatlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3k9f_B:Type_II_DNA_topoisomerase; title=DETAILED STRUCTURAL INSIGHT INTO THE QUINOLONE-DNA CLEAVAGE COMPLEX OF TYPE IIA TOPOISOMERASES organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DG(H1):DC(F4) DA(H2):DT(F3) DC(H3):DG(F2) DT(H4):DA(F1) DA(H5):DT(G15) DT(H6):DA(G14) DG(H7):DC(G13) DC(H8):DG(G12) DA(H9):DT(G11) DC(H10):DG(G10) DG(H11):DC(G9) chainB ( 26) ARG28 0 0 0 0 0 0 2 0 0 0 0 ( 77) SER79 0 0 0 0 1 0 0 0 0 0 0 ( 78) SER80 0 0 0 0 1 1 0 0 0 0 0 (115) ARG117 3 0 0 0 0 0 0 0 0 0 0 (168) ILE170 0 0 0 0 0 0 0 11 15 0 0 prot.sequence niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdSSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssle >3k9f_BD:Type_II_DNA_topoisomerase; title=DETAILED STRUCTURAL INSIGHT INTO THE QUINOLONE-DNA CLEAVAGE COMPLEX OF TYPE IIA TOPOISOMERASES organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DG(H1):DC(F4) DA(H2):DT(F3) DC(H3):DG(F2) DT(H4):DA(F1) DA(H5):DT(G15) DT(H6):DA(G14) DG(H7):DC(G13) DC(H8):DG(G12) DA(H9):DT(G11) DC(H10):DG(G10) DG(H11):DC(G9) chainB ( 26) ARG28 0 0 0 0 0 0 2 0 0 0 0 ( 77) SER79 0 0 0 0 1 0 0 0 0 0 0 ( 78) SER80 0 0 0 0 1 1 0 0 0 0 0 (115) ARG117 3 0 0 0 0 0 0 0 0 0 0 (168) ILE170 0 0 0 0 0 0 0 11 15 0 0 chainD ( 44) LYS458 0 0 0 0 3 5 0 0 0 0 0 prot.sequence niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdSSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssle/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvdfsieanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskkgkkeevayawtdgeleelrkqfgkgatlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3k9f_C:Type_II_DNA_topoisomerase; title=DETAILED STRUCTURAL INSIGHT INTO THE QUINOLONE-DNA CLEAVAGE COMPLEX OF TYPE IIA TOPOISOMERASES organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(E9):DG(F11) DA(E10):DT(F10) DT(E11):DA(F9) DG(E12):DC(F8) DA(E13):DT(F7) DA(E14):DT(F6) DT(E15):DA(F5) chainC ( 44) LYS458 0 0 0 0 1 6 3 prot.sequence kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvdfsieanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskkgkkeevayawtdgeleelrkqfgkgatlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3kd1_E:DNA/RNA_polymerases;Ribonuclease_H-like; title=CLOSED BINARY COMPLEX OF AN RB69 GP43 FINGERS DOMAIN MUTANT COMPLEXED WITH AN ACYCLIC GMP TERMINATED PRIMER TEMPLATE PAIR. organism=Enterobacteria phage RB69 DNA sequence DT(T5):DA(P113) DT(T6):DA(P112) DA(T7):DT(P111) DT(T8):DA(P110) DG(T9):DC(P109) DA(T10):DT(P108) DC(T11):DG(P107) DA(T12):DT(P106) DG(T13):DC(P105) DC(T14):DG(P104) DC(T15):DG(P103) DG(T16):DC(P102) DC(T17):DG(P101) chainE (567) TYR567 2 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 7 6 0 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniidvyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkwvsqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqmalkvtcnslYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdfsa >3kd5_E:DNA/RNA_polymerases;Ribonuclease_H-like; title=CLOSED TERNARY COMPLEX OF AN RB69 GP43 FINGERS DOMAIN MUTANT COMPLEXED WITH AN ACYCLIC GMP TERMINATED PRIMER TEMPLATE PAIR AND PHOSPHONOFORMIC ACID. organism=Enterobacteria phage RB69 DNA sequence DT(T5):DA(P113) DT(T6):DA(P112) DA(T7):DT(P111) DT(T8):DA(P110) DG(T9):DC(P109) DA(T10):DT(P108) DC(T11):DG(P107) DA(T12):DT(P106) DG(T13):DC(P105) DC(T14):DG(P104) DC(T15):DG(P103) DG(T16):DC(P102) DC(T17):DG(P101) chainE (567) TYR567 2 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 6 6 0 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniidvyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkwvsqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqmalkvtcnslYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdfsa >3kde_C:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE THAP DOMAIN FROM D. MELANOGASTER P-ELEMENT TRANSPOSASE IN COMPLEX WITH ITS NATURAL DNA BINDING SITE organism=Drosophila melanogaster DNA sequence DG(A1):DC(B20) DT(A2):DA(B19) DT(A3):DA(B18) DA(A4):DT(B17) DA(A5):DT(B16) DG(A6):DC(B15) DG(A8):DC(B13) DG(A9):DC(B12) chainC ( 3) TYR3 0 0 0 0 0 0 0 2 ( 18) HIS18 0 0 0 0 8 10 0 0 ( 40) ASN40 0 0 0 0 0 0 3 0 ( 42) GLN42 0 0 0 0 0 1 4 0 ( 63) ARG65 0 0 8 7 13 0 0 0 prot.sequence mkYckfcckavtgvkliHvpkcaikrklweqslgcslgeNsQicdthfndsqwkaakgqtfkRrRlnadavpsk >3ket_A:NADP-binding_Rossmann-fold_domains;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A REX-FAMILY TRANSCRIPTIONAL REGULATORY PROTEIN FROM STREPTOCOCCUS AGALACTIAE BOUND TO A PALINDROMIC OPERATOR organism=Streptococcus agalactiae serogroup III DNA sequence DA(B2):DT(C43) DT(B3):DA(C42) DT(B4):DA(C41) DG(B5):DC(C40) DT(B6):DA(C39) DG(B7):DC(C38) DA(B8):DT(C37) DA(B9):DT(C36) DA(B10):DT(C35) DT(B11):DA(C34) chainA ( 42) ALA47 0 0 0 0 0 2 3 0 0 0 ( 43) THR48 0 0 0 0 0 0 1 0 0 0 ( 45) ARG50 0 0 11 16 7 0 0 0 0 0 ( 46) ARG51 0 0 0 0 7 8 8 1 0 0 ( 49) SER54 0 0 0 0 1 0 0 0 0 0 ( 50) TYR55 0 0 0 0 0 0 0 1 0 0 ( 57) ARG62 4 11 9 0 0 0 0 0 0 0 prot.sequence sipkatakrlslyyrifkrfntdgiekasskqiadalgidsATvRRdfSYfgelgrRgfgydvkklmnffaeilndhsttnvmlvgcgnigrallhyrfhdrnkmqismafdldsndlvgkttedgipvygistindhlidsdietailtvpsteaqevadilvkagikgilsfspvhltlpkdiivqyvdltselqtllyfmnq >3khc_B:Clavaminate_synthase-like; title=CRYSTAL STRUCTURE OF ESCHERICHIA COLI ALKB IN COMPLEX WITH SSDNA CONTAINING A 1-METHYLGUANINE LESION organism=Escherichia coli K-12 DNA sequence DT(C5):DA(D6) DG(C6):DC(D5) DC(C7):DG(D4) chainB ( 47) TYR55 4 0 0 (121) SER129 4 0 0 (153) ARG161 3 0 0 prot.sequence epwqeplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggYtmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklSlhqdkaepdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagkk >3khg_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH MISINSERTED A OPPOSITE THE 2- AMINOFLUORENE-GUANINE [AF]G LESION organism=Sulfolobus solfataricus P2 DNA sequence DC(E907):DG(D813) DT(E908):DA(D812) DA(E909):DT(D811) DC(E910):DG(D810) DC(E911):DG(D809) DA(E912):DT(D808) DT(E913):DA(D807) DC(E914):DG(D806) DC(E915):DG(D805) DA(E916):DT(D804) DA(E917):DT(D803) DC(E918):DG(D802) chainA (285) HIS285 0 0 0 0 0 2 0 0 0 0 0 0 (336) ARG336 0 5 0 0 0 0 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3khh_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH A C BASE OPPOSITE THE 2- AMINOFLUORENE-GUANINE [AF]G LESION organism=Sulfolobus solfataricus P2 DNA sequence DC(J1907):DG(H1813) DT(J1908):DA(H1812) DA(J1909):DT(H1811) DC(J1910):DG(H1810) DC(J1911):DG(H1809) DA(J1912):DT(H1808) DT(J1913):DA(H1807) DC(J1914):DG(H1806) DC(J1915):DG(H1805) DA(J1916):DT(H1804) DA(J1917):DT(H1803) DC(J1918):DG(H1802) chainB (285) HIS1285 0 0 0 0 0 3 0 0 0 0 0 0 (295) ILE1295 0 0 1 0 0 0 0 0 0 0 0 0 (336) ARG1336 0 9 0 0 0 0 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldIvsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3khl_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 POST-EXTENSION TERNARY COMPLEX WITH MISINSERTED A OPPOSITE THE 2- AMINOFLUORENE-GUANINE [AF]G LESION organism=Sulfolobus solfataricus P2 DNA sequence DA(J1904):TTP(B1414) DC(J1905):DDG(H1815) DC(J1907):DG(H1813) DT(J1908):DA(H1812) DA(J1909):DT(H1811) DC(J1910):DG(H1810) DC(J1911):DG(H1809) DA(J1912):DT(H1808) DT(J1913):DA(H1807) DC(J1914):DG(H1806) DC(J1915):DG(H1805) DA(J1916):DT(H1804) chainB ( 7) ASP1007 6 0 0 0 0 0 0 0 0 0 0 0 ( 9) ASP1009 1 0 0 0 0 0 0 0 0 0 0 0 ( 10) TYR1010 3 0 0 0 0 0 0 0 0 0 0 0 ( 11) PHE1011 1 0 0 0 0 0 0 0 0 0 0 0 ( 12) TYR1012 1 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL1032 5 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA1042 5 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA1044 3 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR1045 5 0 0 0 0 0 0 0 0 0 0 0 ( 48) TYR1048 5 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG1051 12 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA1057 4 0 0 0 0 0 0 0 0 0 0 0 (105) ASP1105 5 0 0 0 0 0 0 0 0 0 0 0 (159) LYS1159 8 0 0 0 0 0 0 0 0 0 0 0 (244) SER1244 0 0 0 1 0 0 0 0 0 0 0 0 (332) ARG1332 0 2 0 0 0 0 0 0 0 0 0 0 (336) ARG1336 0 0 2 3 0 0 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvAtanyearkfgvkagipiveakkilpnavylpmrKevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >3khr_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 POST-EXTENSION TERNARY COMPLEX WITH THE CORRECT C OPPOSITE THE 2- AMINOFLUORENE-GUANINE [AF]G LESION organism=Sulfolobus solfataricus P2 DNA sequence DA(J1904):TTP(B1414) DC(J1905):DDG(H1815) DG(J1906):DC(H1814) DC(J1907):DG(H1813) DT(J1908):DA(H1812) DA(J1909):DT(H1811) DC(J1910):DG(H1810) DC(J1911):DG(H1809) DA(J1912):DT(H1808) DT(J1913):DA(H1807) DC(J1914):DG(H1806) DC(J1915):DG(H1805) chainB ( 7) ASP1007 5 0 0 0 0 0 0 0 0 0 0 0 ( 9) ASP1009 1 0 0 0 0 0 0 0 0 0 0 0 ( 10) TYR1010 3 0 0 0 0 0 0 0 0 0 0 0 ( 11) PHE1011 1 0 0 0 0 0 0 0 0 0 0 0 ( 12) TYR1012 1 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL1032 5 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA1042 5 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA1044 3 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR1045 4 0 0 0 0 0 0 0 0 0 0 0 ( 48) TYR1048 5 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG1051 11 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA1057 5 0 0 0 0 0 0 0 0 0 0 0 (105) ASP1105 5 0 0 0 0 0 0 0 0 0 0 0 (159) LYS1159 8 0 0 0 0 0 0 0 0 0 0 0 (244) SER1244 0 0 0 0 1 0 0 0 0 0 0 0 (332) ARG1332 0 2 0 0 0 0 0 0 0 0 0 0 (336) ARG1336 0 0 0 2 3 0 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvAtanyearkfgvkagipiveakkilpnavylpmrKevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >3kjp_A:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF HPOT1V2-GGTTAGGGTTAG organism=Homo sapiens DNA sequence DG(B2) DT(B3) DT(B4) DA(B5) DG(B6) DG(B7) DG(B8) DT(B9) DT(B10):DG(B12) DA(B11) chainA ( 25) LYS30 0 0 0 0 0 2 0 0 0 0 ( 26) PHE31 0 0 0 0 0 51 0 0 0 0 ( 33) SER38 0 0 4 0 0 0 0 0 0 0 ( 36) THR41 0 9 1 0 0 0 0 0 0 0 ( 37) ASP42 0 5 11 0 0 0 0 0 0 0 ( 43) THR48 0 0 0 0 0 9 0 0 0 0 ( 53) THR58 0 0 0 0 0 3 0 0 0 0 ( 55) LEU60 0 0 0 5 3 0 0 0 0 0 ( 57) PHE62 0 0 41 8 0 0 0 0 0 0 ( 82) GLN87 0 0 0 0 3 0 0 0 0 0 ( 84) TYR89 0 0 0 0 49 0 0 0 0 0 ( 89) GLN94 0 0 0 0 10 0 0 0 0 0 ( 91) ILE96 0 0 1 2 0 0 0 0 0 0 (155) TYR161 0 0 0 0 0 0 0 46 6 0 (217) TYR223 0 0 0 0 0 0 0 0 53 0 (218) ASP224 0 0 0 0 0 0 0 0 11 0 (237) SER243 0 0 0 0 0 0 0 7 0 0 (239) HIS245 0 0 0 0 0 0 0 0 7 0 (260) HIS266 0 0 0 0 0 0 0 0 30 0 (265) TYR271 0 0 0 0 0 5 1 38 0 0 (267) ARG273 0 0 0 0 0 0 0 7 0 0 prot.sequence atnyiytplnqlkggtivnvygvvKFfkppylSkgTDycsvvTivdqtnvklTcLlFsgnyealpiiykngdivrfhrlkiQvYkketQgItssgfasltfegtlgapiiprtsskyfnfttedhkmvealrvwasthmspstllklcdvqpmqYfdltcqllgkaevdgasfllkvwdgtrtpfpswrvliqdlvlegdlshihrlqnltidilvYDnhvhvarslkvgsflriySlHtklqsmnsenqtmlslefhlHggtsYgRgirvlpesnsdvdqlkkdlesanlta >3kjv_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(T706):DOC(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 87) ILE94 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) TYR115 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) PRO157 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) TYR183 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) MET184 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 4 (468) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwkalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagi/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfrkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlek >3kk1_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE-DNA COMPLEX WITH NUCEOTIDE INHIBITOR GS- 9148-DIPHOSPHATE BOUND IN NUCLEOTIDE SITE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(T706):DOC(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 3 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsag >3kk1_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE-DNA COMPLEX WITH NUCEOTIDE INHIBITOR GS- 9148-DIPHOSPHATE BOUND IN NUCLEOTIDE SITE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(T706):DOC(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 3 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsag/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfrkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqle >3kk2_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE-DNA COMPLEX WITH DATP BOUND IN THE NUCLEOTIDE BINDING SITE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) CYS258 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (356) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 3 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiCklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsag >3kk2_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE-DNA COMPLEX WITH DATP BOUND IN THE NUCLEOTIDE BINDING SITE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) CYS258 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (356) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 3 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiCklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsag/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfrkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglttmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgIkvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteaVqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqle >3kk3_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE-DNA COMPLEX WITH GS-9148 TERMINATED PRIMER organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) CYS258 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 6 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiCklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsag >3kk3_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE-DNA COMPLEX WITH GS-9148 TERMINATED PRIMER organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 (157) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 (184) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (258) CYS258 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (448) ARG448 6 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiCklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsag/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfrkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrQlskllrGtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqle >3kle_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF AZT-RESISTANT HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO A DSDNA WITH A BOUND EXCISION PRODUCT, AZTPPPPA organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(C708):DC(D821) DC(C709):DC(D820) DG(C710):DG(D819) DC(C711):DC(D818) DC(C712):DG(D816) DC(C713):DG(D815) DG(C714):DC(D814) DA(C715):DT(D813) DA(C716):DT(D812) DC(C717):DG(D811) DA(C718):DT(D810) DG(C719):DC(D809) DG(C720):DC(D808) DG(C721):DC(D807) DA(C722):DT(D806) DC(C723):DG(D805) DT(C724):DA(D804) DG(C725):DC(D803) DT(C726):DA(D802) chainA ( 94) ILE94 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) ARG356 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictelekegkiskigpenpyntpvfaikkknstrwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglytpdqkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirkvl/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgipHpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymDdlyvgsdleigqhrtkieelrqhllrwglttpdkkhqgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvKqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqgghhhhh >3kle_EF:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF AZT-RESISTANT HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO A DSDNA WITH A BOUND EXCISION PRODUCT, AZTPPPPA organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DA(H802):DT(G726) DC(H803):DG(G725) DA(H804):DT(G724) DG(H805):DC(G723) DT(H806):DA(G722) DC(H807):DG(G721) DC(H808):DG(G720) DC(H809):DG(G719) DT(H810):DA(G718) DG(H811):DC(G717) DT(H812):DA(G716) DT(H813):DA(G715) DC(H814):DG(G714) DG(H815):DC(G713) DG(H816):DC(G712) DC(H818):DC(G711) DG(H819):DG(G710) DC(H820):DC(G709) DC(H821):DG(G708) chainE ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (448) ARG448 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictelekegkiskigpenpyntpvfaikkknstrwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglytpdqkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirkvl/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgipHpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymDdlyvgsdleigqhrtkieelrqhllrwglttpdkkhqgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqg >3kle_MN:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF AZT-RESISTANT HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO A DSDNA WITH A BOUND EXCISION PRODUCT, AZTPPPPA organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(O708):DC(P821) DC(O709):DC(P820) DG(O710):DG(P819) DC(O711):DC(P818) DC(O712):DG(P816) DC(O713):DG(P815) DG(O714):DC(P814) DA(O715):DT(P813) DA(O716):DT(P812) DC(O717):DG(P811) DA(O718):DT(P810) DG(O719):DC(P809) DG(O720):DC(P808) DG(O721):DC(P807) DA(O722):DT(P806) DC(O723):DG(P805) DT(O724):DA(P804) DG(O725):DC(P803) DT(O726):DA(P802) chainM ( 94) ILE94 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 chainN prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictelekegkiskigpenpyntpvfaikkknstrwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglytpdqkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirkvl/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgipHpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymDdlyvgsdleigqhrtkieelrqhllrwglttpdkkhqgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqg >3klf_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF WILD-TYPE HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO A DSDNA WITH A BOUND EXCISION PRODUCT, AZTPPPPA organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(C708):DC(D821) DC(C709):DC(D820) DG(C710):DG(D819) DC(C711):DC(D818) DC(C712):DG(D816) DC(C713):DG(D815) DG(C714):DC(D814) DA(C715):DT(D813) DA(C716):DT(D812) DC(C717):DG(D811) DA(C718):DT(D810) DG(C719):DC(D809) DG(C720):DC(D808) DG(C721):DC(D807) DA(C722):DT(D806) DC(C723):DG(D805) DT(C724):DA(D804) DG(C725):DC(D803) chainA ( 93) ILE94 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TYR183 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 (474) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainB prot.sequence ispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiPhpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqyMddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3klf_EF:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF WILD-TYPE HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO A DSDNA WITH A BOUND EXCISION PRODUCT, AZTPPPPA organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(G708):DC(H821) DC(G709):DC(H820) DG(G710):DG(H819) DC(G711):DC(H818) DC(G712):DG(H816) DC(G713):DG(H815) DG(G714):DC(H814) DA(G715):DT(H813) DA(G716):DT(H812) DC(G717):DG(H811) DA(G718):DT(H810) DG(G719):DC(H809) DG(G720):DC(H808) DG(G721):DC(H807) DA(G722):DT(H806) DC(G723):DG(H805) DT(G724):DA(H804) DG(G725):DC(H803) chainE ( 93) ILE94 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TYR183 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 (474) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainF prot.sequence ispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiPhpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqyMddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3klf_MN:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF WILD-TYPE HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO A DSDNA WITH A BOUND EXCISION PRODUCT, AZTPPPPA organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(O708):DC(P821) DC(O709):DC(P820) DG(O710):DG(P819) DC(O711):DC(P818) DC(O712):DG(P816) DC(O713):DG(P815) DG(O714):DC(P814) DA(O715):DT(P813) DA(O716):DT(P812) DC(O717):DG(P811) DA(O718):DT(P810) DG(O719):DC(P809) DG(O720):DC(P808) DG(O721):DC(P807) DA(O722):DT(P806) DC(O723):DG(P805) DT(O724):DA(P804) DG(O725):DC(P803) chainM ( 93) ILE94 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TYR183 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 (474) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainN prot.sequence ispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiPhpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqyMddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3klg_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF AZT-RESISTANT HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO PRE-TRANSLOCATION AZTMP-TERMINATED DNA (COMPLEX N) organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DA(C705):ATM(D823) DT(C706):DA(D822) DG(C707):DC(D821) DG(C708):DC(D820) DC(C709):DG(D819) DG(C710):DC(D818) DC(C711):MRG(D817) DC(C712):DG(D816) DC(C713):DG(D815) DG(C714):DC(D814) DA(C715):DT(D813) DA(C716):DT(D812) DC(C717):DG(D811) DA(C718):DT(D810) DG(C719):DC(D809) DG(C720):DC(D808) DG(C721):DC(D807) DA(C722):DT(D806) DC(C723):DG(D805) DT(C724):DA(D804) DG(C725):DC(D803) chainA ( 61) PHE61 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG72 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) CYS258 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) TRP266 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) LEU283 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictelekegkiskigpenpyntpvFaikkknstrwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglytpdqkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnWasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaIkkkdstkwrklvDfrelnkrtqdfwevqlgipHpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaIfqssmtkilepfkkqnpdiviyqymDDlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsKllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3klg_EF:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF AZT-RESISTANT HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO PRE-TRANSLOCATION AZTMP-TERMINATED DNA (COMPLEX N) organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DA(G705):ATM(H823) DT(G706):DA(H822) DG(G707):DC(H821) DG(G708):DC(H820) DC(G709):DG(H819) DG(G710):DC(H818) DC(G711):MRG(H817) DC(G712):DG(H816) DC(G713):DG(H815) DG(G714):DC(H814) DA(G715):DT(H813) DA(G716):DT(H812) DC(G717):DG(H811) DA(G718):DT(H810) DG(G719):DC(H809) DG(G720):DC(H808) DG(G721):DC(H807) DA(G722):DT(H806) DC(G723):DG(H805) DT(G724):DA(H804) DG(G725):DC(H803) chainE ( 61) PHE61 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG72 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) CYS258 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) LEU283 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainF prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictelekegkiskigpenpyntpvFaikkknstrwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglytpdqkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaIkkkdstkwrklvDfrelnkrtqdfwevqlgipHpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaIfqssmtkilepfkkqnpdiviyqymDDlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3klh_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF AZT-RESISTANT HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO POST-TRANSLOCATION AZTMP-TERMINATED DNA (COMPLEX P) organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DA(E706):ATM(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) DT(E726):DA(F802) chainA ( 94) ILE94 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) CYS258 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) VAL261 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) LEU283 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (358) ARG358 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 6 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictelekegkiskigpenpyntpvfaikkknstrwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglytpdqkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmRgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk/pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmRgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3kmd_ABCD: title=CRYSTAL STRUCTURE OF THE P53 CORE DOMAIN BOUND TO A FULL CONSENSUS SITE AS A SELF-ASSEMBLED TETRAMER organism=HOMO SAPIENS DNA sequence DG(F2):DC(E19) DG(F3):DC(E18) DC(F4):DG(E17) DA(F5):DT(E16) DT(F6):DA(E15) DG(F7):DC(E14) DC(F8):DG(E13) DC(F9):DG(E12) DT(F10):DA(E11) DA(F11):DT(E10) DG(F12):DC(E9) DG(F13):DC(E8) DC(F14):DG(E7) DA(F15):DT(E6) DT(F16):DA(E5) DG(F17):DC(E4) DC(F18):DG(E3) DC(F19):DG(E2) chainA (185) ALA276 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) CYS277 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) ARG280 0 3 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 29) LYS120 0 0 0 0 0 0 6 10 4 0 0 0 0 0 0 0 0 0 ( 30) SER121 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (185) ALA276 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (186) CYS277 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (189) ARG280 0 0 0 0 17 13 1 0 0 0 0 0 0 0 0 0 0 0 chainD ( 29) LYS120 0 0 0 0 0 0 0 0 0 3 8 7 0 0 0 0 0 0 ( 30) SER121 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (185) ALA276 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 (186) CYS277 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (189) ARG280 0 0 0 0 0 0 0 0 0 0 0 1 12 21 0 0 0 0 chainC ( 29) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 (185) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 (186) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (189) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 14 2 0 prot.sequence plsssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk/plsssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk/plsssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk/plsssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk >3kmd_C:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE P53 CORE DOMAIN BOUND TO A FULL CONSENSUS SITE AS A SELF-ASSEMBLED TETRAMER organism=HOMO SAPIENS DNA sequence DG(F2):DC(E19) DG(F3):DC(E18) DC(F4):DG(E17) DA(F5):DT(E16) DT(F6):DA(E15) DG(F7):DC(E14) DC(F8):DG(E13) DC(F9):DG(E12) DT(F10):DA(E11) DA(F11):DT(E10) DG(F12):DC(E9) DG(F13):DC(E8) DC(F14):DG(E7) DA(F15):DT(E6) DT(F16):DA(E5) DG(F17):DC(E4) DC(F18):DG(E3) DC(F19):DG(E2) chainC ( 29) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 (185) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 (186) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (189) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 14 2 0 prot.sequence plsssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk >3kmp_A:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD1-MH1/DNA COMPLEX organism=MUS MUSCULUS DNA sequence DT(D3):DA(C15) DA(D4):DT(C14) DT(D5):DA(C13) DG(D6):DC(C12) DT(D7):DA(C11) DC(D8):DG(C10) DT(D9):DA(C9) DA(D10):DT(C8) DG(D11):DC(C7) DA(D12):DT(C6) DC(D13):DG(C5) DT(D14):DA(C4) DG(D15):DC(C3) DA(D16):DT(C2) chainA ( 66) ARG74 0 0 12 11 1 0 0 0 0 0 0 0 0 0 ( 68) GLN76 0 0 0 0 0 2 8 4 0 0 0 0 0 0 ( 73) LYS81 0 0 0 0 6 9 4 0 0 0 0 0 0 0 prot.sequence ftspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalscpgqpsncvtiprsldgRlQvshrKglphviycrvwrwpdlqshhelkpleccefpfgskqkevcinpyhykrves >3kmp_AB:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD1-MH1/DNA COMPLEX organism=MUS MUSCULUS DNA sequence DT(D3):DA(C15) DA(D4):DT(C14) DT(D5):DA(C13) DG(D6):DC(C12) DT(D7):DA(C11) DC(D8):DG(C10) DT(D9):DA(C9) DA(D10):DT(C8) DG(D11):DC(C7) DA(D12):DT(C6) DC(D13):DG(C5) DT(D14):DA(C4) DG(D15):DC(C3) DA(D16):DT(C2) chainA ( 66) ARG74 0 0 12 11 1 0 0 0 0 0 0 0 0 0 ( 68) GLN76 0 0 0 0 0 2 8 4 0 0 0 0 0 0 ( 73) LYS81 0 0 0 0 6 9 4 0 0 0 0 0 0 0 chainB ( 65) ARG74 0 0 0 0 0 0 0 0 0 2 10 7 0 0 ( 67) GLN76 0 0 0 0 0 0 5 8 2 0 0 0 0 0 ( 72) LYS81 0 0 0 0 0 0 0 4 8 3 0 0 0 0 prot.sequence ftspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalscpgqpsncvtiprsldgRlQvshrKglphviycrvwrwpdlqshhelkpleccefpfgskqkevcinpyhykrves/tspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalscpgqpsncvtiprsldgRlQvshrKglphviycrvwrwpdlqshhelkpleccefpfgskqkevcinpyhykrves >3knt_A:DNA-glycosylase; title=CRYSTAL STRUCTURE OF METHANOCALDOCOCCUS JANNASCHII 8-OXOGUANINE GLYCOSYLASE/LYASE IN COMPLEX WITH 15MER DNA CONTAINING 8-OXOGUANINE organism=Methanocaldococcus jannaschii DNA sequence DG(F2):DC(E30) DG(F3):DC(E29) DT(F4):DA(E28) DA(F5):DT(E27) DG(F6):DC(E26) DA(F7):DT(E25) DC(F8):DG(E24) DC(F9):8OG(E23) DT(F10):DA(E22) DG(F11):DC(E21) DG(F12):DC(E20) DA(F13):DT(E19) DC(F14):DG(E18) DG(F15):DC(E17) chainA ( 47) THR47 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 48) ALA48 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 49) ASN49 0 0 0 0 0 0 58 0 0 0 0 0 0 0 ( 52) ALA52 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 84) ARG84 0 0 0 0 0 0 0 14 36 0 0 0 0 0 ( 85) PHE85 0 0 0 0 0 0 38 10 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (133) HIS133 0 0 0 0 0 0 0 10 0 0 0 0 0 0 (136) ARG136 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (145) ILE145 0 0 0 0 0 0 0 14 0 0 0 0 0 0 (147) ASP147 0 0 0 0 0 0 0 17 0 0 0 0 0 0 (148) ARG148 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (150) ILE150 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (166) THR166 0 0 1 0 0 1 0 0 0 0 0 0 0 0 (194) ASP194 0 0 0 0 0 0 0 13 0 0 0 0 0 0 (195) LEU195 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (198) TRP198 0 0 0 0 0 0 0 41 0 0 0 0 0 0 (207) LYS207 0 0 0 0 0 0 0 6 0 0 0 0 0 0 prot.sequence mmlikkieelknseikdiidkriqefksfknksneewfkelcfciltANftaeggiriqkeigdgfltlpreeleeklknlghRFyrkRaeyivlarrfknikdivesfenekvareflvrnikgigyqeashflrnvgyddvaiidRhilrelyennyideipkTlsrrkyleienilrdigeevnlklseldlyiwylrtgkvlk >3ko2_AB:Homing_endonucleases; title=I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY (-7C) organism=Monomastix sp. DNA sequence DG(C1):DC(D24) DC(C2):DG(D23) DA(C3):DT(D22) DG(C4):DC(D21) DA(C5):DT(D20) DC(C6):DG(D19) DC(C7):DG(D18) DG(C8):DC(D17) DT(C9):DA(D16) DC(C10):DG(D15) DG(C11):DC(D14) DT(C12):DA(D13) DG(C13):DC(D12) DA(C14):DT(D11) DG(C15):DC(D10) DA(C16):DT(D9) DC(C17):DG(D8) DA(C18):DT(D7) DG(C19):DC(D6) DT(C20):DA(D5) DT(C21):DA(D4) DC(C22):DG(D3) DC(C23):DG(D2) DG(C24):DC(D1) chainA ( 19) SER24 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG28 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG32 0 0 14 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASP34 5 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) TYR35 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN41 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE49 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 18 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 19) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 ( 23) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 7 0 0 0 0 0 ( 25) ILE30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 27) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 1 0 0 ( 29) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 30) TYR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 ( 36) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 ( 38) GLU43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 ( 44) ILE49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 12 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 12 0 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 ( 80) TRP85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 prot.sequence tlqpteaayiagfldgdgSiYaRlipRpDYkdikyQvelaisfIqrkdkfpylqdiydqlgkrgtlRkdRgDgIadytiwgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki/tlqpteaayiagfldgdgSiYaRlIpRpDYkdikyQvElaisfIqrkdkfpylqdiydqlgkrgtlRkdRgDgIadytiWgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki >3ko2_FG:Homing_endonucleases; title=I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY (-7C) organism=Monomastix sp. DNA sequence DC(I1):DG(H24) DG(I2):DC(H23) DG(I3):DC(H22) DA(I4):DT(H21) DA(I5):DT(H20) DC(I6):DG(H19) DT(I7):DA(H18) DG(I8):DC(H17) DT(I9):DA(H16) DC(I10):DG(H15) DT(I11):DA(H14) DC(I12):DG(H13) DA(I13):DT(H12) DC(I14):DG(H11) DG(I15):DC(H10) DA(I16):DT(H9) DC(I17):DG(H8) DG(I18):DC(H7) DG(I19):DC(H6) DT(I20):DA(H5) DT(I22):DG(H4) DG(I23):DC(H2) DC(I24):DG(H1) chainF ( 19) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 ( 23) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 2 0 0 0 0 ( 27) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 ( 29) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 ( 30) TYR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 44) ILE49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 15 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 80) TRP85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 1 0 0 chainG ( 19) SER24 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG28 0 0 0 0 1 6 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ILE30 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG32 0 0 21 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASP34 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU43 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE49 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 1 15 8 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 80) TRP85 0 0 0 0 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tlqpteaayiagfldgdgSiYaRlipRpDYkdikyqvelaisfIqrkdkfpylqdiydqlgkrgtlRkdRgDgIadytiWgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki/tlqpteaayiagfldgdgSiYaRlIpRpDykdikyqvElaisfIqrkdkfpylqdiydqlgkrgtlRkdRgDgIadytiWgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki >3ko2_G:Homing_endonucleases; title=I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY (-7C) organism=Monomastix sp. DNA sequence DC(I1):DG(H24) DG(I2):DC(H23) DG(I3):DC(H22) DA(I4):DT(H21) DA(I5):DT(H20) DC(I6):DG(H19) DT(I7):DA(H18) DG(I8):DC(H17) DT(I9):DA(H16) DC(I10):DG(H15) DT(I11):DA(H14) DC(I12):DG(H13) DA(I13):DT(H12) DC(I14):DG(H11) DG(I15):DC(H10) DA(I16):DT(H9) DC(I17):DG(H8) DG(I18):DC(H7) DG(I19):DC(H6) DT(I20):DA(H5) DT(I22):DG(H4) DG(I23):DC(H2) DC(I24):DG(H1) chainG ( 19) SER24 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG28 0 0 0 0 1 6 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ILE30 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG32 0 0 21 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASP34 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU43 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE49 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 1 15 8 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 80) TRP85 0 0 0 0 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tlqpteaayiagfldgdgSiYaRlIpRpDykdikyqvElaisfIqrkdkfpylqdiydqlgkrgtlRkdRgDgIadytiWgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki >3kov_AB:SRF-like; title=STRUCTURE OF MEF2A BOUND TO DNA REVEALS A COMPLETELY FOLDED MADS- BOX/MEF2 DOMAIN THAT RECOGNIZES DNA AND RECRUITS TRANSCRIPTION CO- FACTORS organism=Homo sapiens DNA sequence DC(D3):DG(C14) DT(D4):DA(C13) DT(D5):DA(C12) DA(D6):DT(C11) DT(D7):DA(C10) DA(D8):DT(C9) DA(D9):DT(C8) DA(D10):DT(C7) DT(D11):DA(C6) DA(D12):DT(C5) DG(D13):DC(C4) DT(D14):DA(C3) chainA ( 2) ARG3 0 0 0 0 0 0 0 0 0 3 10 1 ( 22) LYS23 0 0 0 0 0 0 0 0 0 6 1 0 chainB ( 2) ARG3 0 6 18 8 0 0 0 0 0 0 0 0 ( 22) LYS23 0 1 5 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk/gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk >3kov_I:SRF-like; title=STRUCTURE OF MEF2A BOUND TO DNA REVEALS A COMPLETELY FOLDED MADS- BOX/MEF2 DOMAIN THAT RECOGNIZES DNA AND RECRUITS TRANSCRIPTION CO- FACTORS organism=Homo sapiens DNA sequence DC(L3):DG(K14) DT(L4):DA(K13) DT(L5):DA(K12) DA(L6):DT(K11) DT(L7):DA(K10) DA(L8):DT(K9) DA(L9):DT(K8) DA(L10):DT(K7) DT(L11):DA(K6) DA(L12):DT(K5) DG(L13):DC(K4) DT(L14):DA(K3) chainI ( 2) ARG3 0 0 0 0 0 0 0 0 9 18 5 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 6 1 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk >3kov_IJ:SRF-like; title=STRUCTURE OF MEF2A BOUND TO DNA REVEALS A COMPLETELY FOLDED MADS- BOX/MEF2 DOMAIN THAT RECOGNIZES DNA AND RECRUITS TRANSCRIPTION CO- FACTORS organism=Homo sapiens DNA sequence DC(L3):DG(K14) DT(L4):DA(K13) DT(L5):DA(K12) DA(L6):DT(K11) DT(L7):DA(K10) DA(L8):DT(K9) DA(L9):DT(K8) DA(L10):DT(K7) DT(L11):DA(K6) DA(L12):DT(K5) DG(L13):DC(K4) DT(L14):DA(K3) chainI ( 2) ARG3 0 0 0 0 0 0 0 0 9 18 5 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 6 1 0 chainJ ( 2) ARG3 0 8 13 1 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 6 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk/gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk >3kqh_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=THREE CONFORMATIONAL SNAPSHOTS OF THE HEPATITIS C VIRUS NS3 HELICASE REVEAL A RATCHET TRANSLOCATION MECHANISM organism=Hepatitis C virus DNA sequence DA(C1) DA(C2) DA(C3) DA(C4) DA(C5) DA(C6) chainB (110) THR298 0 0 0 0 1 0 (181) HIS369 9 0 0 0 0 0 (205) ARG393 0 0 0 5 0 0 (244) VAL432 0 10 0 0 0 0 (246) GLN434 0 13 4 0 0 0 (260) THR448 1 0 0 0 0 0 (261) THR449 2 0 0 0 0 0 (262) THR450 16 0 0 0 0 0 (305) GLU493 0 0 3 2 0 0 (313) TRP501 0 0 0 0 0 58 (314) TYR502 0 0 0 0 0 4 (368) ASN556 0 0 5 4 0 0 prot.sequence sppavpqtfqvahlhaptgsgkstkvpaayaaqgykvlvlnpsvaatlgfgaymskahgidpnirtgvrtittgapitystygkfladggcsggaydiiicdechstdsTtilgigtvldqaetagarlvvlatatppgsvtvphpnieevalsstgeipfygkaipietikggrhlifcHskkkcdelaaklsglglnavayyRgldvsviptsgdvivvatdalmtgftgdfdsvidcntcVtQtvdfsldptftieTTTvpqdavsrsqrrgrtgrgrmgiyrfvtpgerpsgmfdssvlcEcydagcaWYeltpaetsvrlraylntpglpvcqdhlefwesvftglthidahflsqtkqagdNfpylvayqatvcaraqapppswdqmwkclirlkptlhgptpllyrlgavqnevttthpitkyimacms >3kqk_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=THREE CONFORMATIONAL SNAPSHOTS OF THE HEPATITIS C VIRUS NS3 HELICASE REVEAL A RATCHET TRANSLOCATION MECHANISM organism=Hepatitis C virus DNA sequence DT(D1) DT(D2) DT(D3) DT(D4) DT(D5) DT(D6) chainA (110) THR298 0 0 0 0 4 0 (181) HIS369 4 0 0 0 0 0 (205) ARG393 0 0 0 5 0 0 (244) VAL432 1 8 0 0 0 0 (246) GLN434 0 3 0 0 0 0 (260) THR448 3 2 0 0 0 0 (261) THR449 2 0 0 0 0 0 (262) THR450 4 0 0 0 0 0 (313) TRP501 0 0 0 0 0 49 (314) TYR502 0 0 0 0 0 2 (368) ASN556 0 0 5 2 0 0 prot.sequence sppavpqtfqvahlhaptgsgkstkvpaayaaqgykvlvlnpsvaatlgfgaymskahgidpnirtgvrtittgapitystygkfladggcsggaydiiicdechstdsTtilgigtvldqaetagarlvvlatatppgsvtvphpnieevalsstgeipfygkaipietikggrhlifcHskkkcdelaaklsglglnavayyRgldvsviptsgdvivvatdalmtgftgdfdsvidcntcVtQtvdfsldptftieTTTvpqdavsrsqrrgrtgrgrmgiyrfvtpgerpsgmfdssvlcecydagcaWYeltpaetsvrlraylntpglpvcqdhlefwesvftglthidahflsqtkqagdNfpylvayqatvcaraqapppswdqmwkclirlkptlhgptpllyrlgavqnevttthpitkyimacms >3kql_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=THREE CONFORMATIONAL SNAPSHOTS OF THE HEPATITIS C VIRUS NS3 HELICASE REVEAL A RATCHET TRANSLOCATION MECHANISM organism=Hepatitis C virus DNA sequence DT(F16) DT(F17) DT(F18) DT(F19) DT(F20) DT(F21) chainB (108) ASP296 0 0 2 0 0 0 (110) THR298 0 0 0 4 1 0 (205) ARG393 0 0 6 9 0 0 (244) VAL432 0 5 0 0 0 0 (246) GLN434 0 6 0 0 0 0 (260) THR448 6 2 0 0 0 0 (305) GLU493 0 0 1 0 0 0 (313) TRP501 0 0 0 0 50 13 (314) TYR502 0 0 0 0 4 0 (363) LYS551 0 0 0 0 0 5 (364) GLN552 0 0 0 0 0 1 (368) ASN556 0 3 6 0 0 0 prot.sequence sppavpqtfqvahlhaptgsgkstkvpaayaaqgykvlvlnpsvaatlgfgaymskahgidpnirtgvrtittgapitystygkfladggcsggaydiiicdechstDsTtilgigtvldqaetagarlvvlatatppgsvtvphpnieevalsstgeipfygkaipietikggrhlifchskkkcdelaaklsglglnavayyRgldvsviptsgdvivvatdalmtgftgdfdsvidcntcVtQtvdfsldptftieTttvpqdavsrsqrrgrtgrgrmgiyrfvtpgerpsgmfdssvlcEcydagcaWYeltpaetsvrlraylntpglpvcqdhlefwesvftglthidahflsqtKQagdNfpylvayqatvcaraqapppswdqmwkclirlkptlhgptpllyrlgavqnevttthpitkyimacmsa >3kqu_ABC:P-loop_containing_nucleoside_triphosphate_hydrolases; title=THREE CONFORMATIONAL SNAPSHOTS OF THE HEPATITIS C VIRUS NS3 HELICASE REVEAL A RATCHET TRANSLOCATION MECHANISM organism=Hepatitis C virus DNA sequence DT(M1) DT(M2) DT(M3) DT(M4) DT(M5) DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) DT(M17) DT(M18) chainA (108) ASP296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (205) ARG393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (224) ASP412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (244) VAL432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (246) GLN434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 (260) THR448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 (305) GLU493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (368) ASN556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 chainB (108) ASP296 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 (110) THR298 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 (205) ARG393 0 0 0 0 0 0 0 0 0 0 0 3 21 3 0 0 0 0 (224) ASP412 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (244) VAL432 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (246) GLN434 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 (260) THR448 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 (305) GLU493 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (313) TRP501 0 0 0 0 0 0 0 0 0 0 0 0 0 56 7 0 0 0 (314) TYR502 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (364) GLN552 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 (368) ASN556 0 0 0 0 0 0 0 0 0 1 3 4 0 0 0 0 0 0 chainC (108) ASP296 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 (110) THR298 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 (205) ARG393 0 0 0 0 0 3 22 3 0 0 0 0 0 0 0 0 0 0 (224) ASP412 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) VAL432 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) GLN434 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 (260) THR448 0 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) GLU493 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (313) TRP501 0 0 0 0 0 0 0 57 6 0 0 0 0 0 0 0 0 0 (314) TYR502 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (364) GLN552 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 (368) ASN556 0 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sppavpqtfqvahlhaptgsgkstkvpaayaaqgykvlvlnpsvaatlgfgaymskahgidpnirtgvrtittgapitystygkfladggcsggaydiiicdechstDsttilgigtvldqaetagarlvvlatatppgsvtvphpnieevalsstgeipfygkaipietikggrhlifchskkkcdelaaklsglglnavayyRgldvsviptsgdvivvatDalmtgftgdfdsvidcntcVtQtvdfsldptftieTttvpqdavsrsqrrgrtgrgrmgiyrfvtpgerpsgmfdssvlcEcydagcawyeltpaetsvrlraylntpglpvcqdhlefwesvftglthidahflsqtkqagdNfpylvayqatvcaraqapppswdqmwkclirlkptlhgptpllyrlgavqnevttthpitkyimacmsa/sppavpqtfqvahlhaptgsgkstkvpaayaaqgykvlvlnpsvaatlgfgaymskahgidpnirtgvrtittgapitystygkfladggcsggaydiiicdechstDsTtilgigtvldqaetagarlvvlatatppgsvtvphpnieevalsstgeipfygkaipietikggrhlifchskkkcdelaaklsglglnavayyRgldvsviptsgdvivvatDalmtgftgdfdsvidcntcVtQtvdfsldptftieTttvpqdavsrsqrrgrtgrgrmgiyrfvtpgerpsgmfdssvlcEcydagcaWYeltpaetsvrlraylntpglpvcqdhlefwesvftglthidahflsqtkQagdNfpylvayqatvcaraqapppswdqmwkclirlkptlhgptpllyrlgavqnevttthpitkyimacmsa/sppavpqtfqvahlhaptgsgkstkvpaayaaqgykvlvlnpsvaatlgfgaymskahgidpnirtgvrtittgapitystygkfladggcsggaydiiicdechstDsTtilgigtvldqaetagarlvvlatatppgsvtvphpnieevalsstgeipfygkaipietikggrhlifchskkkcdelaaklsglglnavayyRgldvsviptsgdvivvatDalmtgftgdfdsvidcntcVtQtvdfsldptftieTttvpqdavsrsqrrgrtgrgrmgiyrfvtpgerpsgmfdssvlcEcydagcaWYeltpaetsvrlraylntpglpvcqdhlefwesvftglthidahflsqtkQagdNfpylvayqatvcaraqapppswdqmwkclirlkptlhgptpllyrlgavqnevttthpitkyimacmsa >3kqu_DEF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=THREE CONFORMATIONAL SNAPSHOTS OF THE HEPATITIS C VIRUS NS3 HELICASE REVEAL A RATCHET TRANSLOCATION MECHANISM organism=Hepatitis C virus DNA sequence DT(N21) DT(N22) DT(N23) DT(N24) DT(N25) DT(N26) DT(N27) DT(N28) DT(N29) DT(N30) DT(N31) DT(N32) DT(N33) DT(N34) DT(N35) DT(N36) DT(N37) DT(N38) chainD (108) ASP296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (205) ARG393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (224) ASP412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (244) VAL432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (246) GLN434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 (260) THR448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 (305) GLU493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (368) ASN556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 chainE (108) ASP296 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 (110) THR298 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 (205) ARG393 0 0 0 0 0 0 0 0 0 0 0 3 21 3 0 0 0 0 (224) ASP412 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (244) VAL432 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (246) GLN434 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 (260) THR448 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 (305) GLU493 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (313) TRP501 0 0 0 0 0 0 0 0 0 0 0 0 0 55 6 0 0 0 (314) TYR502 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 (364) GLN552 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 (368) ASN556 0 0 0 0 0 0 0 0 0 1 3 4 0 0 0 0 0 0 chainF (108) ASP296 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 (110) THR298 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 (205) ARG393 0 0 0 0 0 3 21 3 0 0 0 0 0 0 0 0 0 0 (224) ASP412 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) VAL432 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) GLN434 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 (260) THR448 0 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) GLU493 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (313) TRP501 0 0 0 0 0 0 0 57 6 0 0 0 0 0 0 0 0 0 (314) TYR502 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (364) GLN552 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 (368) ASN556 0 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sppavpqtfqvahlhaptgsgkstkvpaayaaqgykvlvlnpsvaatlgfgaymskahgidpnirtgvrtittgapitystygkfladggcsggaydiiicdechstDsttilgigtvldqaetagarlvvlatatppgsvtvphpnieevalsstgeipfygkaipietikggrhlifchskkkcdelaaklsglglnavayyRgldvsviptsgdvivvatDalmtgftgdfdsvidcntcVtQtvdfsldptftieTttvpqdavsrsqrrgrtgrgrmgiyrfvtpgerpsgmfdssvlcEcydagcawyeltpaetsvrlraylntpglpvcqdhlefwesvftglthidahflsqtkqagdNfpylvayqatvcaraqapppswdqmwkclirlkptlhgptpllyrlgavqnevttthpitkyimacmsa/sppavpqtfqvahlhaptgsgkstkvpaayaaqgykvlvlnpsvaatlgfgaymskahgidpnirtgvrtittgapitystygkfladggcsggaydiiicdechstDsTtilgigtvldqaetagarlvvlatatppgsvtvphpnieevalsstgeipfygkaipietikggrhlifchskkkcdelaaklsglglnavayyRgldvsviptsgdvivvatDalmtgftgdfdsvidcntcVtQtvdfsldptftieTttvpqdavsrsqrrgrtgrgrmgiyrfvtpgerpsgmfdssvlcEcydagcaWYeltpaetsvrlraylntpglpvcqdhlefwesvftglthidahflsqtkQagdNfpylvayqatvcaraqapppswdqmwkclirlkptlhgptpllyrlgavqnevttthpitkyimacmsa/sppavpqtfqvahlhaptgsgkstkvpaayaaqgykvlvlnpsvaatlgfgaymskahgidpnirtgvrtittgapitystygkfladggcsggaydiiicdechstDsTtilgigtvldqaetagarlvvlatatppgsvtvphpnieevalsstgeipfygkaipietikggrhlifchskkkcdelaaklsglglnavayyRgldvsviptsgdvivvatDalmtgftgdfdsvidcntcVtQtvdfsldptftieTttvpqdavsrsqrrgrtgrgrmgiyrfvtpgerpsgmfdssvlcEcydagcaWYeltpaetsvrlraylntpglpvcqdhlefwesvftglthidahflsqtkQagdNfpylvayqatvcaraqapppswdqmwkclirlkptlhgptpllyrlgavqnevttthpitkyimacmsa >3kqu_E:P-loop_containing_nucleoside_triphosphate_hydrolases; title=THREE CONFORMATIONAL SNAPSHOTS OF THE HEPATITIS C VIRUS NS3 HELICASE REVEAL A RATCHET TRANSLOCATION MECHANISM organism=Hepatitis C virus DNA sequence DT(N21) DT(N22) DT(N23) DT(N24) DT(N25) DT(N26) DT(N27) DT(N28) DT(N29) DT(N30) DT(N31) DT(N32) DT(N33) DT(N34) DT(N35) DT(N36) DT(N37) DT(N38) chainE (108) ASP296 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 (110) THR298 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 (205) ARG393 0 0 0 0 0 0 0 0 0 0 0 3 21 3 0 0 0 0 (224) ASP412 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (244) VAL432 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (246) GLN434 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 (260) THR448 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 (305) GLU493 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (313) TRP501 0 0 0 0 0 0 0 0 0 0 0 0 0 55 6 0 0 0 (314) TYR502 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 (364) GLN552 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 (368) ASN556 0 0 0 0 0 0 0 0 0 1 3 4 0 0 0 0 0 0 prot.sequence sppavpqtfqvahlhaptgsgkstkvpaayaaqgykvlvlnpsvaatlgfgaymskahgidpnirtgvrtittgapitystygkfladggcsggaydiiicdechstDsTtilgigtvldqaetagarlvvlatatppgsvtvphpnieevalsstgeipfygkaipietikggrhlifchskkkcdelaaklsglglnavayyRgldvsviptsgdvivvatDalmtgftgdfdsvidcntcVtQtvdfsldptftieTttvpqdavsrsqrrgrtgrgrmgiyrfvtpgerpsgmfdssvlcEcydagcaWYeltpaetsvrlraylntpglpvcqdhlefwesvftglthidahflsqtkQagdNfpylvayqatvcaraqapppswdqmwkclirlkptlhgptpllyrlgavqnevttthpitkyimacmsa >3ksa_A:Type_II_DNA_topoisomerase; title=DETAILED STRUCTURAL INSIGHT INTO THE DNA CLEAVAGE COMPLEX OF TYPE IIA TOPOISOMERASES (CLEAVED FORM) organism=? DNA sequence DC(E9):DG(F11) DA(E10):DT(F10) DT(E11):DA(F9) DG(E12):DC(F8) DA(E13):DT(F7) DA(E14):DT(F6) DT(E15):DA(F5) DG(H1):DC(F4) DA(H2):DT(F3) DC(H3):DG(F2) DT(H4):DA(F1) DA(H5):DT(G15) DT(H6):DA(G14) DG(H7):DC(G13) DC(H8):DG(G12) DA(H9):DT(G11) DC(H10):DG(G10) DG(H11):DC(G9) chainA ( 18) TYR20 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) SER80 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (168) ILE170 0 0 16 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqnmsledimgerfgrYskyiiqdralpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteiekqiviteipyeinkanlvkkiddvrvnnkvagiavrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssle >3ksa_ABCD:Type_II_DNA_topoisomerase; title=DETAILED STRUCTURAL INSIGHT INTO THE DNA CLEAVAGE COMPLEX OF TYPE IIA TOPOISOMERASES (CLEAVED FORM) organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(E9):DG(F11) DA(E10):DT(F10) DT(E11):DA(F9) DG(E12):DC(F8) DA(E13):DT(F7) DA(E14):DT(F6) DT(E15):DA(F5) DG(H1):DC(F4) DA(H2):DT(F3) DC(H3):DG(F2) DT(H4):DA(F1) DA(H5):DT(G15) DT(H6):DA(G14) DG(H7):DC(G13) DC(H8):DG(G12) DA(H9):DT(G11) DC(H10):DG(G10) DG(H11):DC(G9) chainA ( 18) TYR20 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) SER80 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (168) ILE170 0 0 16 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 78) SER80 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (168) ILE170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 15 0 0 chainC ( 44) LYS458 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 0 0 0 chainD ( 44) LYS458 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 prot.sequence niqnmsledimgerfgrYskyiiqdralpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteiekqiviteipyeinkanlvkkiddvrvnnkvagiavrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssle/niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteiekqiviteipyeinkanlvkkiddvrvnnkvagiavrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssle/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvdfsieanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskkkeevayawtdgeleelrkqfgkgatlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvdfsieanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskeevayawtdgeleelrkqfgkgatlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3ksb_ABCD:Type_II_DNA_topoisomerase; title=DETAILED STRUCTURAL INSIGHT INTO THE DNA CLEAVAGE COMPLEX OF TYPE IIA TOPOISOMERASES (RE-SEALED FORM) organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(E9):DG(F26) DA(E10):DT(F25) DT(E11):DA(F24) DG(E12):DC(F23) DA(E13):DT(F22) DA(E14):DT(F21) DT(E15):DA(F20) DG(E16):DC(F19) DA(E17):DT(F18) DC(E18):DG(F17) DT(E19):DA(F16) DA(E20):DT(F15) DT(E21):DA(F14) DG(E22):DC(F13) DC(E23):DG(F12) DA(E24):DT(F11) DC(E25):DG(F10) DG(E26):DC(F9) chainA ( 26) ARG28 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) SER80 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (168) ILE170 0 0 14 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 78) SER80 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (168) ILE170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 15 0 0 chainC ( 44) LYS458 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 chainD ( 44) LYS458 0 0 0 0 0 0 0 0 0 0 0 2 3 2 0 0 0 0 prot.sequence niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteiekqiviteipyeinkanlvkkiddvrvnnkvagiavrdesdrdglriaikdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssle/niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteiekqiviteipyeinkanlvkkiddvrvnnkvagiavrdesdrdglriaikdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssle/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakadilkneeintmiytigagvdfsieanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskkkeevayawtdgeleelrkqfgkgatlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakadilkneeintmiytigagvdfsieanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskkkeevayawtdgeleelrkqfatlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3ksb_C:Type_II_DNA_topoisomerase; title=DETAILED STRUCTURAL INSIGHT INTO THE DNA CLEAVAGE COMPLEX OF TYPE IIA TOPOISOMERASES (RE-SEALED FORM) organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(F9):DG(E26) DG(F10):DC(E25) DT(F11):DA(E24) DG(F12):DC(E23) DC(F13):DG(E22) DA(F14):DT(E21) DT(F15):DA(E20) DA(F16):DT(E19) DG(F17):DC(E18) DT(F18):DA(E17) DC(F19):DG(E16) DA(F20):DT(E15) DT(F21):DA(E14) DT(F22):DA(E13) DC(F23):DG(E12) DA(F24):DT(E11) DT(F25):DA(E10) DG(F26):DC(E9) chainC ( 44) LYS458 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 prot.sequence kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakadilkneeintmiytigagvdfsieanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskkkeevayawtdgeleelrkqfgkgatlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3ktq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF AN ACTIVE TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) DOC(B112):DG(C205) DCT(A113):DG(C204) chainA (248) LYS540 0 0 0 0 0 0 0 4 5 0 0 0 0 (253) TYR545 0 0 0 0 0 0 0 0 0 1 0 0 0 (281) ARG573 0 0 0 0 0 0 0 0 0 0 4 9 0 (288) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 0 (291) ASN583 0 0 0 0 0 0 0 0 0 10 1 0 0 (318) ASP610 0 0 0 0 0 0 0 0 0 0 0 0 8 (320) SER612 0 0 0 0 0 0 0 0 0 0 0 0 2 (321) GLN613 0 0 0 0 0 0 0 0 0 0 0 0 1 (322) ILE614 0 0 0 0 0 0 0 0 0 0 0 0 2 (323) GLU615 0 0 0 0 0 0 0 0 0 0 0 0 2 (347) HIS639 0 0 0 0 0 0 0 0 0 0 0 0 5 (367) ARG659 0 0 0 0 0 0 0 0 0 0 0 0 6 (371) LYS663 0 0 0 0 0 0 0 0 0 0 0 0 13 (372) THR664 0 0 0 0 0 0 0 0 0 0 0 0 4 (375) PHE667 0 0 0 0 0 0 0 0 0 0 0 0 28 (379) TYR671 0 0 0 0 0 0 0 0 0 0 0 0 9 (381) MET673 0 0 0 0 0 0 0 0 0 0 0 0 2 (385) ARG677 0 0 0 0 0 0 0 0 0 0 0 0 9 (458) ASN750 0 0 0 0 0 0 0 0 0 0 0 2 1 (462) GLN754 0 0 0 0 0 0 0 0 0 0 0 4 0 (492) HIS784 0 0 0 0 0 0 0 0 0 0 1 0 0 (493) ASP785 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraakTinFgvlYgMsahRlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsak >3ktu_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURE OF HUMAN 8-OXOGUANINE GLYCOSYLASE 1 BOUND TO FLUORNINATED OXOG-CONTAINING DNA organism=Homo sapiens DNA sequence DG(B2):DC(C29) DT(B3):DA(C28) DA(B4):DT(C27) DG(B5):DC(C26) DA(B6):DT(C25) DC(B7):DG(C24) DC(B8):FDG(C23) DT(B9):DA(C22) DG(B10):DC(C21) DG(B11):DC(C20) DA(B12):DT(C19) DC(B13):DG(C18) chainA ( 37) PHE45 0 0 0 0 0 0 1 0 0 0 0 0 (133) PHE144 0 0 0 0 0 0 4 0 0 0 0 0 (137) SER148 0 0 0 0 0 12 0 0 0 0 0 0 (138) CYS149 0 0 0 0 0 6 1 4 0 0 0 0 (140) ASN151 0 0 0 0 0 0 0 2 0 0 0 0 (143) ARG154 0 0 0 0 0 0 3 15 0 0 0 0 (192) TYR203 0 0 0 0 0 42 13 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 8 0 0 0 0 0 (196) TYR207 0 0 0 0 1 0 0 0 0 0 0 0 (238) LYS249 0 0 0 0 0 0 8 0 0 0 0 0 (242) CYS253 0 0 0 0 0 0 2 0 0 0 0 0 (246) MET257 0 0 0 0 0 0 3 0 0 0 0 0 (255) PRO266 0 0 0 0 0 0 6 0 0 0 0 0 (257) ASP268 0 0 0 0 0 0 13 0 0 0 0 0 (260) MET271 0 0 0 0 0 0 1 0 0 0 0 0 (282) PRO293 0 1 0 0 0 0 0 0 0 0 0 0 (304) GLN315 0 0 0 0 0 0 10 0 0 0 0 0 (308) PHE319 0 0 0 0 0 0 37 0 0 0 0 0 prot.sequence sefghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfqgvrllrqdpieclfsficsSCnNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarYvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpsPqtnkelgnffrslwgpyagwaqavlfsadlrq >3kuy_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=DNA STRETCHING IN THE NUCLEOSOME FACILITATES ALKYLATION BY AN INTERCALATING ANTITUMOR AGENT organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgisskaMsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3kwq_ABCDEFGH:Histone-fold;PH_domain-like; title=STRUCTURAL CHARACTERIZATION OF H3K56Q NUCLEOSOMES AND NUCLEOSOMAL ARRAYS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DG(J271):DC(I22) DA(J273):DT(I21) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 13) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 1) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqestellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dnIqgitkpairrlarrggvkrisgliYeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/akTrssraglqfpvgrvhrllrkgnyaErvgagapvylaavleylTaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/rkEsyaiyvykvlkqvhpdtgisskamSimnsfvndvferiageaSrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/pHRyrpgtvalreirryqestellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/kvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfPvgrvhrllrkgnYaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3kwq_E:Histone-fold; title=STRUCTURAL CHARACTERIZATION OF H3K56Q NUCLEOSOMES AND NUCLEOSOMAL ARRAYS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DG(J271):DC(I22) DA(J273):DT(I21) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqestellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >3kxb_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURAL CHARACTERIZATION OF H3K56Q NUCLEOSOMES AND NUCLEOSOMAL ARRAYS organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I21):DA(J273) DC(I22):DG(J271) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 24) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 21) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 2) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rpgtvalreirryqestellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/itkpairrlarrggvkrisgliyEetrgvlkvflenvirdaVtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkGnyaervgagapvylaavLeyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/yvykvlkqvhpdtgisskamsimNsfvndvferiageasrlAhynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/tvalreirryqestellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/rhrkvlrdniqgitkpairrLarrggvkrisgliyeetRgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/raglqfpvgrvhrllrkgnyAervgagapvylaavleyLtaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/rKtrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3kxb_E:Histone-fold; title=STRUCTURAL CHARACTERIZATION OF H3K56Q NUCLEOSOMES AND NUCLEOSOMAL ARRAYS organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DG(J271):DC(I22) DA(J273):DT(I21) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainE ( 21) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tvalreirryqestellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >3kxt_A: title=CRYSTAL STRUCTURE OF SULFOLOBUS CREN7-DSDNA COMPLEX organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(C109):DC(B108) DC(C110):DG(B107) DG(C111):DC(B106) DA(C112):DT(B105) DT(C113):DA(B104) DC(C114):DG(B103) DG(C115):DC(B102) DC(C116):DG(B101) chainA ( 22) TRP26 0 0 0 5 9 0 0 0 ( 24) LEU28 0 0 0 0 17 22 0 0 ( 26) PRO30 0 0 0 0 0 6 5 0 ( 29) ARG33 0 0 0 0 0 0 5 4 ( 32) VAL36 0 0 0 0 0 2 0 0 ( 34) ILE38 0 0 0 0 4 0 0 0 ( 47) ARG51 0 0 9 18 4 0 0 0 prot.sequence mkpvkvktpagkeaelvpekvWaLaPkgRkgVkIglfkdpetgkyfRhklpddypi >3kz8_AB: title=DIVERSITY IN DNA RECOGNITION BY P53 REVEALED BY CRYSTAL STRUCTURES WITH HOOGSTEEN BASE PAIRS (P53-DNA COMPLEX 3) organism=Homo sapiens DNA sequence DG(C1) DG(C2) DG(C3) DC(C4) DA(C5) DT(C6) DG(C7) DC(C8) DC(C9) DC(C10) DG(C11) DG(C12) DG(C13) DC(C14) DA(C15) DT(C16) DG(C17) DC(C18) DC(C19) DC(C20) chainA ( 26) LYS120 6 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ARG280 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) LYS120 0 0 0 0 0 0 0 0 0 0 6 8 5 0 0 0 0 0 0 0 (183) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 prot.sequence ssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdlappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkk/ssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdlappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkk >3kz8_B:p53-like_transcription_factors; title=DIVERSITY IN DNA RECOGNITION BY P53 REVEALED BY CRYSTAL STRUCTURES WITH HOOGSTEEN BASE PAIRS (P53-DNA COMPLEX 3) organism=Homo sapiens DNA sequence DG(C1) DG(C2) DG(C3) DC(C4) DA(C5) DT(C6) DG(C7) DC(C8) DC(C9) DC(C10) DG(C11) DG(C12) DG(C13) DC(C14) DA(C15) DT(C16) DG(C17) DC(C18) DC(C19) DC(C20) chainB ( 26) LYS120 0 0 0 0 0 0 0 0 0 0 6 8 5 0 0 0 0 0 0 0 (183) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 prot.sequence ssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdlappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkk >3l1p_A:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=POU PROTEIN:DNA COMPLEX organism=Mus musculus DNA sequence DT(M2):DA(N23) DC(M3):DG(N22) DC(M4):DG(N21) DA(M5):DT(N20) DT(M6):DA(N19) DT(M7):DA(N18) DT(M8):DA(N17) DG(M9):DC(N16) DC(M10):DG(N15) DC(M11):DG(N14) DT(M12):DA(N13) DT(M13):DA(N12) DT(M14):DA(N11) DC(M15):DG(N10) DA(M16):DT(N9) DA(M17):DT(N8) DA(M18):DT(N7) DT(M19):DA(N6) DG(M20):DC(N5) DT(M21):DA(N4) DG(M22):DC(N3) DG(M23):DC(N2) chainA ( 27) GLN27 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR45 0 0 0 0 0 0 0 0 0 0 0 14 7 5 0 0 0 0 0 0 0 0 ( 46) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 48) SER48 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 ( 49) ARG49 0 0 0 0 0 0 0 0 0 0 0 1 7 18 12 0 0 0 0 0 0 0 ( 55) LEU55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 59) ASN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 94) ARG97 0 0 0 0 0 0 0 0 0 0 0 0 0 13 5 5 0 0 0 0 0 0 (136) VAL139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 (140) ASN143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 1 0 0 0 0 (143) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 14 0 0 0 prot.sequence dmkalqkeleqfakllkqkritlgytQadvgltlgvlfgkvfSQTTiSRfealqLslkNmsklrpllekwveeadnnenlqeisksvqarkrkRtsienrvrwsletmflkspkpslqqithianqlglekdvvrVwfsNrrQkgkr >3l1p_AB:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=POU PROTEIN:DNA COMPLEX organism=Mus musculus DNA sequence DT(M2):DA(N23) DC(M3):DG(N22) DC(M4):DG(N21) DA(M5):DT(N20) DT(M6):DA(N19) DT(M7):DA(N18) DT(M8):DA(N17) DG(M9):DC(N16) DC(M10):DG(N15) DC(M11):DG(N14) DT(M12):DA(N13) DT(M13):DA(N12) DT(M14):DA(N11) DC(M15):DG(N10) DA(M16):DT(N9) DA(M17):DT(N8) DA(M18):DT(N7) DT(M19):DA(N6) DG(M20):DC(N5) DT(M21):DA(N4) DG(M22):DC(N3) DG(M23):DC(N2) chainA ( 27) GLN27 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR45 0 0 0 0 0 0 0 0 0 0 0 14 7 5 0 0 0 0 0 0 0 0 ( 46) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 48) SER48 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 ( 49) ARG49 0 0 0 0 0 0 0 0 0 0 0 1 7 18 12 0 0 0 0 0 0 0 ( 55) LEU55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 59) ASN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 94) ARG97 0 0 0 0 0 0 0 0 0 0 0 0 0 13 5 5 0 0 0 0 0 0 (136) VAL139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 (140) ASN143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 1 0 0 0 0 (143) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 14 0 0 0 chainB ( 41) SER43 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN44 0 0 0 0 0 0 0 0 0 1 9 5 0 0 0 0 0 0 0 0 0 0 ( 43) THR45 0 0 0 0 0 0 0 5 6 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) SER48 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG49 0 0 0 0 0 0 10 19 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) LEU55 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ARG97 0 0 0 0 0 7 11 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) VAL139 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) SER142 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) ASN143 0 0 0 2 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) GLN146 0 0 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dmkalqkeleqfakllkqkritlgytQadvgltlgvlfgkvfSQTTiSRfealqLslkNmsklrpllekwveeadnnenlqeisksvqarkrkRtsienrvrwsletmflkspkpslqqithianqlglekdvvrVwfsNrrQkgkr/kalqkeleqfakllkqkritlgytqadvgltlgvlfgkvfSQTtiSRfealqLslknmsklrpllekwveeadnnenlqeisksqarkrkRtsienrvrwsletmflkspkpslqqithianqlglekdvvrVwfSNrrQkgkrs >3l2c_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF FOXO4 BOUND TO DNA organism=Homo sapiens DNA sequence DG(C25):DC(B13) DT(C26):DA(B12) DT(C27):DA(B11) DG(C28):DC(B10) DT(C29):DA(B9) DT(C30):DA(B8) DT(C31):DA(B7) DA(C32):DT(B6) DC(C33):DG(B5) DA(C34):DT(B4) DT(C35):DA(B3) DA(C36):DT(B2) DG(C37):DC(B1) chainA ( 50) SER142 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 56) ASN148 0 0 0 0 0 10 4 0 0 0 0 0 0 ( 57) SER149 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 59) ARG151 0 0 9 6 1 0 0 0 0 0 0 0 0 ( 60) HIS152 0 0 0 0 0 10 10 15 0 0 0 0 0 ( 63) SER155 0 0 0 0 5 2 0 0 0 0 0 0 0 prot.sequence rrnawgnqsyaelisqaiesapekrltlaqiyewmvrtvpyfkdkgdsnSsagwkNSiRHnlSlhskfikvhneatgksswwmln >3l2p_A:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=HUMAN DNA LIGASE III RECOGNIZES DNA ENDS BY DYNAMIC SWITCHING BETWEEN TWO DNA BOUND STATES organism=Homo sapiens DNA sequence DC(B1):DG(D44) DG(B2):DC(D43) DG(B3):DC(D42) DG(B4):DC(D41) DA(B5):DT(D40) DT(B6):DA(D39) DG(B7):DC(D38) DC(B8):DG(D37) DG(B9):DC(D36) DT(B10):DA(D35) DC(B11):DG(D34) DG(C12):DC(D33) DT(C13):DA(D32) DC(C14):DG(D31) DG(C15):DC(D30) DG(C16):DC(D29) DA(C17):DT(D28) DC(C18):DG(D27) DT(C19):DA(D26) DG(C20):DC(D25) chainA ( 25) TYR192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (305) PHE487 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (505) ARG716 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (506) PHE717 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 prot.sequence hmrhkdcllrefrklcamvadnpsYntktqiiqdflrkggdvyltvklllpgviktvynlndkqivklfsrifncnpddmardleqgdvsetirvffeqsksfppaakslltiqevdefllrlskltkedeqqqalqdiasrctandlkciirlikhdlkmnsgakhvldaldpnayeafkasrnlqdvvervlhnaqevelsvqaslmtpvqpmlaeacksveyamkkcpngmfseikydgervqvhkngdhfsyfsrslkpvlphkvahfkdyipqafpgghsmildsevllidnktgkplpFgtlgvhkkaafqdanvclfvfdciyfndvslmdrplcerrkflhdnmveipnrimfsemkrvtkaldladmitrviqegleglvlkdvkgtyepgkrhwlkvkkdylnmadtadlvvlgafygqgskggmmsiflmgcydpgsqkwctvtkcagghddatlarlqneldmvkiskaavweitgaefskseahtadgisiRFprctrirddkdwksatnlpqlkelyqlsk >3l2q_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN APO FORM organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DT(C16):DA(D4) DG(C17):DC(D3) DT(C18):DA(D2) DA(C19):DT(D1) chainA (103) ILE112 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ARG114 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) GLN215 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) GLU221 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) ARG222 3 11 12 6 0 0 0 0 0 0 0 0 0 0 0 0 (250) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptsh >3l2r_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DT(C16):DA(D4) DG(C17):DC(D3) DT(C18):DA(D2) DA(C19):DT(D1) chainA (103) ILE112 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ARG114 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) GLN215 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) GLU221 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) ARG222 4 11 13 6 0 0 0 0 0 0 0 0 0 0 0 0 (250) PRO259 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptsh >3l2u_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND GS9137 (ELVITEGRAVIR) organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DA(D2):DT(C18) DC(D3):DG(C17) DA(D4):DT(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (103) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (105) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 (206) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (212) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (213) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 14 11 3 (250) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence aeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptsh >3l2v_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MANGANESE AND MK0518 (RALTEGRAVIR) organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DA(D2):DT(C18) DC(D3):DG(C17) DA(D4):DT(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (103) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (105) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (206) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (212) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (213) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 13 12 3 (250) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence aeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptsh >3l2w_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MANGANESE AND GS9137 (ELVITEGRAVIR) organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DT(C16):DA(D4) DG(C17):DC(D3) DT(C18):DA(D2) DA(C19):DT(D1) chainA (103) ILE112 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ARG114 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) GLN215 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) GLU221 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) ARG222 3 10 15 6 0 0 0 0 0 0 0 0 0 0 0 0 (250) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptsh >3l4j_A:Type_II_DNA_topoisomerase; title=TOPOISOMERASE II-DNA CLEAVAGE COMPLEX, APO organism=Saccharomyces cerevisiae DNA sequence DG(C5):DC(B11) DT(C6):DA(B10) DA(C7):DT(B9) DG(C8):DC(B8) DC(C9):DG(B7) DA(C10):DT(B6) DG(C11):DC(B5) DT(C12):DA(B4) DA(C13):DT(B3) DG(C14):DC(B2) DG(C15):DC(B1) chainA ( 57) LYS477 3 4 2 0 0 0 0 0 0 0 0 (320) SER740 0 4 0 0 0 0 0 0 0 0 0 (410) GLU831 0 0 0 0 1 0 0 0 0 0 0 (412) ILE833 0 0 0 14 21 0 0 0 0 0 0 (417) SER838 0 0 0 0 1 0 0 0 0 0 0 prot.sequence sritnypkledankagtkegykctlvltegdsalslavaglavvgrdyygcyplrgKmlnvreasadqilknaeiqaikkimglqhrkkyedtkslryghlmimtdqdhdgshikgliinflessfpglldiqgfllefitpiikvsitkptkntiafynmpdyekwreeeshkftwkqkyykglgtslaqevreyfsnldrhlkifhslqgndkdyidlafskkkaddrkewlrqyepgtvldptlkeipisdfinkelilfslaDniRsipnvldgfkpgqrkvlygcfkknlkselkvaqlapyvsectayhhgeqSlaqtiiglaqnfvgsnniylllpngafgtratggkdaaaariytelnkltrkifhpaddplykyiqedektvepewylpilpmilvngaEgIgtgwStyippfnpleiiknirhlmndeeleqmhpwfrgwtgtieeieplryrmygrieqigdnvleitelpartwtstikeylllglsgndkikpwikdmeeqhddnikfiitlspeemaktrkigfyerfklispislmnmvafdphgkikkynsvneilsefyyvrleyyqkrkdhmserlqwevekysfqvkfikmiiekeltvtnkprnaiiqelenlgfprfnkegkpyygseelygtyeyllgmriwsltkeryqkllkqkqeketelenllklsakdiwntdlkafevgyqeflqrdaear >3l4k_A:Type_II_DNA_topoisomerase; title=TOPOISOMERASE II-DNA CLEAVAGE COMPLEX, METAL-BOUND organism=Saccharomyces cerevisiae DNA sequence DG(C5):DC(B11) DT(C6):DA(B10) DA(C7):DT(B9) DG(C8):DC(B8) DC(C9):DG(B7) DA(C10):DT(B6) DG(C11):DC(B5) DT(C12):DA(B4) DA(C13):DT(B3) DG(C14):DC(B2) DG(C15):DC(B1) chainA ( 57) LYS477 1 3 2 0 0 0 0 0 0 0 0 (319) GLN739 1 0 0 0 0 0 0 0 0 0 0 (320) SER740 0 3 0 0 0 0 0 0 0 0 0 (410) GLU831 0 0 0 0 1 0 0 0 0 0 0 (412) ILE833 0 0 0 18 20 0 0 0 0 0 0 (417) SER838 0 0 0 0 2 0 0 0 0 0 0 prot.sequence sritnypkledankagtkegykctlvltegdsalslavaglavvgrdyygcyplrgKmlnvreasadqilknaeiqaikkimglqhrkkyedtkslryghlmimtdqdhdgshikgliinflessfpglldiqgfllefitpiikvsitkptkntiafynmpdyekwreeeshkftwkqkyykglgtslaqevreyfsnldrhlkifhslqgndkdyidlafskkkaddrkewlrqyepgtvldptlkeipisdfinkelilfsladnirsipnvldgfkpgqrkvlygcfkknlkselkvaqlapyvsectayhhgeQSlaqtiiglaqnfvgsnniylllpngafgtratggkdaaaariytelnkltrkifhpaddplykyiqedektvepewylpilpmilvngaEgIgtgwStyippfnpleiiknirhlmndeeleqmhpwfrgwtgtieeieplryrmygrieqigdnvleitelpartwtstikeylllglsgndkikpwikdmeeqhddnikfiitlspeemaktrkigfyerfklispislmnmvafdphgkikkynsvneilsefyyvrleyyqkrkdhmserlqwevekysfqvkfikmiiekeltvtnkprnaiiqelenlgfprfnkegkpyygseelygtyeyllgmriwsltkeryqkllkqkqeketelenllklsakdiwntdlkafevgyqeflqrdaear >3l8b_B:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF A REPLICATIVE DNA POLYMERASE BOUND TO THE OXIDIZED GUANINE LESION GUANIDINOHYDANTOIN organism=Enterobacteria phage RB69 DNA sequence DG(F101):DC(E17) DC(F102):DG(E16) DG(F103):DC(E15) DG(F104):DC(E14) DA(F105):DT(E13) DC(F106):DG(E12) DT(F107):DA(E11) DG(F108):DC(E10) DC(F109):DG(E9) DT(F110):DA(E8) DT(F111):DA(E7) DA(F112):DT(E6) DA(F113):DT(E5) chainB (560) TYR567 0 0 0 0 0 0 0 0 0 0 0 0 1 (699) LYS706 0 0 0 0 0 0 0 0 0 0 6 8 0 (727) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 (793) LYS800 0 0 0 0 2 2 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3laj_AD:C-terminal_domain_of_arginine_repressor;"Winged_helix"_DNA-binding_domain; title=THE STRUCTURE OF THE INTERMEDIATE COMPLEX OF THE ARGININE REPRESSOR FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO ITS DNA OPERATOR AND L- ARGININE. organism=Mycobacterium tuberculosis DNA sequence DT(L1):DA(K16) DT(L2):DA(K15) DG(L3):DC(K14) DC(L4):DG(K13) DA(L5):DT(K12) DT(L6):DA(K11) DC(L7):DG(K10) DG(L8):DC(K9) DT(L9):DA(K8) DT(L10):DA(K7) DA(L11):DT(K6) DT(L12):DA(K5) DG(L13):DC(K4) DC(L14):DG(K3) DA(L15):DT(K2) DA(L16):DT(K1) chainA ( 38) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 39) GLN53 0 0 0 0 0 0 0 0 0 13 10 0 0 0 0 0 ( 40) ALA54 0 0 0 0 0 0 0 0 0 0 0 4 3 1 0 0 ( 43) SER57 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 ( 44) ARG58 0 0 0 0 0 0 0 0 0 0 0 9 5 13 9 0 chainD ( 37) THR52 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN53 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 ( 39) ALA54 0 0 2 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER57 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 43) ARG58 0 4 12 6 10 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aanragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpevsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr/anragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr >3laj_BF:C-terminal_domain_of_arginine_repressor;"Winged_helix"_DNA-binding_domain; title=THE STRUCTURE OF THE INTERMEDIATE COMPLEX OF THE ARGININE REPRESSOR FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO ITS DNA OPERATOR AND L- ARGININE. organism=Mycobacterium tuberculosis DNA sequence DT(I1):DA(J16) DT(I2):DA(J15) DG(I3):DC(J14) DC(I4):DG(J13) DA(I5):DT(J12) DT(I6):DA(J11) DA(I7):DT(J10) DA(I8):DT(J9) DC(I9):DG(J8) DG(I10):DC(J7) DA(I11):DT(J6) DT(I12):DA(J5) DG(I13):DC(J4) DC(I14):DG(J3) DA(I15):DT(J2) DA(I16):DT(J1) chainB ( 38) THR52 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN53 0 0 0 0 0 10 13 0 0 0 0 0 0 0 0 0 ( 40) ALA54 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER57 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 ( 44) ARG58 0 9 13 5 9 0 0 0 0 0 0 0 0 0 0 0 chainF ( 37) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 38) GLN53 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 ( 39) ALA54 0 0 0 0 0 0 0 0 0 0 0 3 3 2 0 0 ( 42) SER57 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 ( 43) ARG58 0 0 0 0 0 0 0 0 0 0 0 10 5 12 4 0 prot.sequence aanragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpevsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr/anragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr >3laj_C:C-terminal_domain_of_arginine_repressor;"Winged_helix"_DNA-binding_domain; title=THE STRUCTURE OF THE INTERMEDIATE COMPLEX OF THE ARGININE REPRESSOR FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO ITS DNA OPERATOR AND L- ARGININE. organism=Mycobacterium tuberculosis DNA sequence DT(G1):DA(H16) DT(G2):DA(H15) DG(G3):DC(H14) DC(G4):DG(H13) DA(G5):DT(H12) DT(G6):DA(H11) DA(G7):DT(H10) DA(G8):DT(H9) DC(G9):DG(H8) DG(G10):DC(H7) DA(G11):DT(H6) DT(G12):DA(H5) DG(G13):DC(H4) DC(G14):DG(H3) DA(G15):DT(H2) DA(G16):DT(H1) chainC ( 38) THR52 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN53 0 0 0 0 0 10 13 0 0 0 0 0 0 0 0 0 ( 40) ALA54 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER57 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 ( 44) ARG58 0 9 13 5 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aanragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpevsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr >3laj_CE:C-terminal_domain_of_arginine_repressor;"Winged_helix"_DNA-binding_domain; title=THE STRUCTURE OF THE INTERMEDIATE COMPLEX OF THE ARGININE REPRESSOR FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO ITS DNA OPERATOR AND L- ARGININE. organism=Mycobacterium tuberculosis DNA sequence DT(H1):DA(G16) DT(H2):DA(G15) DG(H3):DC(G14) DC(H4):DG(G13) DA(H5):DT(G12) DT(H6):DA(G11) DC(H7):DG(G10) DG(H8):DC(G9) DT(H9):DA(G8) DT(H10):DA(G7) DA(H11):DT(G6) DT(H12):DA(G5) DG(H13):DC(G4) DC(H14):DG(G3) DA(H15):DT(G2) DA(H16):DT(G1) chainC ( 38) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 39) GLN53 0 0 0 0 0 0 0 0 0 13 10 0 0 0 0 0 ( 40) ALA54 0 0 0 0 0 0 0 0 0 0 0 4 3 1 0 0 ( 43) SER57 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 ( 44) ARG58 0 0 0 0 0 0 0 0 0 0 0 9 5 13 9 0 chainE ( 36) THR52 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN53 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 ( 38) ALA54 0 0 2 3 3 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER57 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 42) ARG58 0 5 12 4 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aanragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpevsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr/nragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr >3lap_AD:C-terminal_domain_of_arginine_repressor;"Winged_helix"_DNA-binding_domain; title=THE STRUCTURE OF THE INTERMEDIATE COMPLEX OF THE ARGININE REPRESSOR FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO ITS DNA OPERATOR AND L- CANAVANINE. organism=Mycobacterium tuberculosis DNA sequence DT(K1):DA(L16) DT(K2):DA(L15) DG(K3):DC(L14) DC(K4):DG(L13) DA(K5):DT(L12) DT(K6):DA(L11) DA(K7):DT(L10) DA(K8):DT(L9) DC(K9):DG(L8) DG(K10):DC(L7) DA(K11):DT(L6) DT(K12):DA(L5) DG(K13):DC(L4) DC(K14):DG(L3) DA(K15):DT(L2) DA(K16):DT(L1) chainA ( 37) THR52 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN53 0 0 0 0 0 10 13 0 0 0 0 0 0 0 0 0 ( 39) ALA54 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER57 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 ( 43) ARG58 0 9 13 5 7 0 0 0 0 0 0 0 0 0 0 0 chainD ( 36) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 37) GLN53 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 ( 38) ALA54 0 0 0 0 0 0 0 0 0 0 0 4 3 2 0 0 ( 41) SER57 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 ( 42) ARG58 0 0 0 0 0 0 0 0 0 0 0 7 6 14 7 0 prot.sequence anragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpegvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr/nragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr >3lap_B:C-terminal_domain_of_arginine_repressor;"Winged_helix"_DNA-binding_domain; title=THE STRUCTURE OF THE INTERMEDIATE COMPLEX OF THE ARGININE REPRESSOR FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO ITS DNA OPERATOR AND L- CANAVANINE. organism=Mycobacterium tuberculosis DNA sequence DT(I1):DA(J16) DT(I2):DA(J15) DG(I3):DC(J14) DC(I4):DG(J13) DA(I5):DT(J12) DT(I6):DA(J11) DA(I7):DT(J10) DA(I8):DT(J9) DC(I9):DG(J8) DG(I10):DC(J7) DA(I11):DT(J6) DT(I12):DA(J5) DG(I13):DC(J4) DC(I14):DG(J3) DA(I15):DT(J2) DA(I16):DT(J1) chainB ( 37) THR52 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN53 0 0 0 0 0 10 13 0 0 0 0 0 0 0 0 0 ( 39) ALA54 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER57 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 ( 43) ARG58 0 10 13 5 7 0 0 0 0 0 0 0 0 0 0 0 prot.sequence anragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpegvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr >3lap_BF:C-terminal_domain_of_arginine_repressor;"Winged_helix"_DNA-binding_domain; title=THE STRUCTURE OF THE INTERMEDIATE COMPLEX OF THE ARGININE REPRESSOR FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO ITS DNA OPERATOR AND L- CANAVANINE. organism=Mycobacterium tuberculosis DNA sequence DT(J1):DA(I16) DT(J2):DA(I15) DG(J3):DC(I14) DC(J4):DG(I13) DA(J5):DT(I12) DT(J6):DA(I11) DC(J7):DG(I10) DG(J8):DC(I9) DT(J9):DA(I8) DT(J10):DA(I7) DA(J11):DT(I6) DT(J12):DA(I5) DG(J13):DC(I4) DC(J14):DG(I3) DA(J15):DT(I2) DA(J16):DT(I1) chainB ( 37) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 38) GLN53 0 0 0 0 0 0 0 0 0 13 10 0 0 0 0 0 ( 39) ALA54 0 0 0 0 0 0 0 0 0 0 0 4 3 1 0 0 ( 42) SER57 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 ( 43) ARG58 0 0 0 0 0 0 0 0 0 0 0 7 5 13 10 0 chainF ( 36) THR52 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN53 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 ( 38) ALA54 0 0 2 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER57 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 ( 42) ARG58 0 6 13 5 8 0 0 0 0 0 0 0 0 0 0 0 prot.sequence anragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpegvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr/nragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr >3lap_CE:C-terminal_domain_of_arginine_repressor;"Winged_helix"_DNA-binding_domain; title=THE STRUCTURE OF THE INTERMEDIATE COMPLEX OF THE ARGININE REPRESSOR FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO ITS DNA OPERATOR AND L- CANAVANINE. organism=Mycobacterium tuberculosis DNA sequence DT(G1):DA(H16) DT(G2):DA(H15) DG(G3):DC(H14) DC(G4):DG(H13) DA(G5):DT(H12) DT(G6):DA(H11) DA(G7):DT(H10) DA(G8):DT(H9) DC(G9):DG(H8) DG(G10):DC(H7) DA(G11):DT(H6) DT(G12):DA(H5) DG(G13):DC(H4) DC(G14):DG(H3) DA(G15):DT(H2) DA(G16):DT(H1) chainC ( 37) THR52 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN53 0 0 0 0 0 10 13 0 0 0 0 0 0 0 0 0 ( 39) ALA54 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER57 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 ( 43) ARG58 0 10 13 5 7 0 0 0 0 0 0 0 0 0 0 0 chainE ( 36) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 37) GLN53 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 ( 38) ALA54 0 0 0 0 0 0 0 0 0 0 0 4 3 2 0 0 ( 41) SER57 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 ( 42) ARG58 0 0 0 0 0 0 0 0 0 0 0 8 6 13 6 0 prot.sequence anragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpegvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr/nragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr >3lds_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF RB69 GP43 WITH DNA AND DATP OPPOSITE 8-OXOG organism=Escherichia phage RB69 DNA sequence DT(T5):DA(P113) DT(T6):DA(P112) DA(T7):DT(P111) DT(T8):DA(P110) DG(T9):DC(P109) DA(T10):DT(P108) DC(T11):DG(P107) DA(T12):DT(P106) DG(T13):DC(P105) DC(T14):DG(P104) DC(T15):DG(P103) DG(T16):DC(P102) DC(T17):DG(P101) chainA (706) LYS706 3 5 0 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 1 1 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3ldy_A:FYVE/PHD_zinc_finger; title=AN EXTRAORDINARY MECHANISM OF DNA PERTURBATION EXHIBITED BY THE RARE- CUTTING HNH RESTRICTION ENDONUCLEASE PACI organism=Pseudomonas alcaligenes DNA sequence DT(C11):DA(B8) DA(C12):DT(B7) DA(C13):DT(B6) DG(C14):DC(B5) DC(C15):DG(B4) DC(C16):DG(B3) DT(C17):DA(B2) DC(C18):DG(B1) chainA ( 21) SER21 0 0 0 2 0 0 0 0 ( 28) MET28 0 0 7 2 0 0 0 0 ( 31) GLN31 0 0 0 2 1 0 0 0 ( 32) ASN32 0 14 13 0 0 0 0 0 ( 35) TYR35 0 0 2 10 0 0 0 0 ( 36) ASN36 12 11 0 0 0 0 0 0 ( 39) LYS39 6 5 9 0 0 0 0 0 ( 40) GLU40 4 0 0 0 0 0 0 0 ( 78) ARG78 1 0 0 0 0 0 0 0 ( 80) ASN80 0 3 6 0 0 0 0 0 ( 81) PRO81 4 12 3 0 0 0 0 0 ( 82) ARG82 0 1 11 10 0 0 0 0 ( 84) TYR84 0 0 2 4 0 0 0 0 (110) PHE110 2 0 0 0 0 0 0 0 (114) ARG114 27 0 0 0 0 0 0 0 prot.sequence mtqcprcqrnlaadefyagsSkmckgcMtwQNlsYNanKEghantftkatflawyglsaqrhcgycgiseagftslhRtNPRgYhiqclgvdrsdsfegyspqnarlacFicnRiksnifsasemdvlgeaiskawhgrgia >3lel_ABCDEF:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURAL INSIGHT INTO THE SEQUENCE-DEPENDENCE OF NUCLEOSOME POSITIONING organism=XENOPUS LAEVIS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DT(J-7):DA(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DA(J-4):DT(I4) DA(J-3):DT(I3) DG(J-2):DC(I2) DG(J-1):DC(I1) DT(J0):DA(I0) DC(J1):DG(I-1) DC(J2):DG(I-2) DT(J3):DA(I-3) DT(J4):DA(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DG(J8):DT(I-7) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 2) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrKgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/gKkRrktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/pHRyRpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rHRkVlrdniqgitkpairrlarrggvKrisgliyeetrgvlkvfLenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >3lel_GH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURAL INSIGHT INTO THE SEQUENCE-DEPENDENCE OF NUCLEOSOME POSITIONING organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DT(I-7):DG(J8) DT(I-6):DA(J6) DA(I-5):DT(J5) DA(I-4):DT(J4) DA(I-3):DT(J3) DG(I-2):DC(J2) DG(I-1):DC(J1) DA(I0):DT(J0) DC(I1):DG(J-1) DC(I2):DG(J-2) DT(I3):DA(J-3) DT(I4):DA(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DA(I7):DT(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainG ( 1) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence Kaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkte/Rktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3lel_KLMOPQR:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURAL INSIGHT INTO THE SEQUENCE-DEPENDENCE OF NUCLEOSOME POSITIONING organism=XENOPUS LAEVIS DNA sequence DA(S-73):DT(T73) DT(S-72):DA(T72) DC(S-71):DG(T71) DA(S-70):DT(T70) DA(S-69):DT(T69) DT(S-68):DA(T68) DA(S-67):DT(T67) DT(S-66):DA(T66) DC(S-65):DG(T65) DC(S-64):DG(T64) DA(S-63):DT(T63) DC(S-62):DG(T62) DC(S-61):DG(T61) DT(S-60):DA(T60) DG(S-59):DC(T59) DC(S-58):DG(T58) DA(S-57):DT(T57) DG(S-56):DC(T56) DA(S-55):DT(T55) DT(S-54):DA(T54) DA(S-53):DT(T53) DC(S-52):DG(T52) DT(S-51):DA(T51) DA(S-50):DT(T50) DC(S-49):DG(T49) DC(S-48):DG(T48) DA(S-47):DT(T47) DA(S-46):DT(T46) DA(S-45):DT(T45) DA(S-44):DT(T44) DG(S-43):DC(T43) DT(S-42):DA(T42) DG(S-41):DC(T41) DT(S-40):DA(T40) DA(S-39):DT(T39) DT(S-38):DA(T38) DT(S-37):DA(T37) DT(S-36):DA(T36) DG(S-35):DC(T35) DA(S-33):DC(T34) DA(S-32):DT(T32) DA(S-31):DT(T31) DC(S-30):DG(T30) DT(S-29):DA(T29) DG(S-28):DC(T28) DC(S-27):DG(T27) DT(S-26):DA(T26) DC(S-25):DG(T25) DC(S-24):DG(T24) DA(S-23):DT(T23) DT(S-22):DA(T22) DC(S-21):DG(T21) DA(S-20):DT(T20) DA(S-19):DT(T19) DA(S-18):DT(T18) DT(S-17):DA(T17) DT(S-16):DA(T16) DA(S-15):DT(T15) DA(S-14):DT(T14) DA(S-13):DT(T13) DT(S-12):DA(T12) DG(S-11):DC(T11) DT(S-10):DA(T10) DT(S-9):DA(T9) DC(S-8):DG(T8) DT(S-7):DA(T7) DT(S-6):DA(T6) DA(S-5):DT(T5) DA(S-4):DT(T4) DA(S-3):DT(T3) DG(S-2):DC(T2) DG(S-1):DC(T1) DA(S0):DT(T0) DC(S1):DG(T-1) DC(S2):DG(T-2) DT(S3):DA(T-3) DT(S4):DA(T-4) DT(S5):DA(T-5) DA(S6):DT(T-6) DA(S7):DT(T-7) DG(S8):DC(T-8) DA(S9):DT(T-9) DA(S10):DT(T-10) DC(S11):DG(T-11) DA(S12):DT(T-12) DT(S13):DA(T-13) DT(S14):DA(T-14) DT(S15):DA(T-15) DA(S16):DT(T-16) DA(S17):DT(T-17) DT(S18):DA(T-18) DT(S19):DA(T-19) DT(S20):DA(T-20) DG(S21):DC(T-21) DA(S22):DT(T-22) DT(S23):DA(T-23) DG(S24):DC(T-24) DG(S25):DC(T-25) DA(S26):DT(T-26) DG(S27):DC(T-27) DC(S28):DG(T-28) DA(S29):DT(T-29) DG(S30):DC(T-30) DT(S31):DA(T-31) DT(S32):DA(T-32) DT(S33):DA(T-33) DC(S34):DG(T-34) DC(S35):DG(T-35) DA(S36):DT(T-36) DA(S37):DT(T-37) DA(S38):DT(T-38) DT(S39):DA(T-39) DA(S40):DT(T-40) DC(S41):DG(T-41) DA(S42):DT(T-42) DC(S43):DG(T-43) DT(S44):DA(T-44) DT(S45):DA(T-45) DT(S46):DA(T-46) DT(S47):DA(T-47) DG(S48):DC(T-48) DG(S49):DC(T-49) DT(S50):DA(T-50) DA(S51):DT(T-51) DG(S52):DC(T-52) DT(S53):DA(T-53) DA(S54):DT(T-54) DT(S55):DA(T-55) DC(S56):DG(T-56) DT(S57):DA(T-57) DG(S58):DC(T-58) DC(S59):DG(T-59) DA(S60):DT(T-60) DG(S61):DC(T-61) DG(S62):DC(T-62) DT(S63):DA(T-63) DG(S64):DC(T-64) DG(S65):DC(T-65) DA(S66):DT(T-66) DT(S67):DA(T-67) DA(S68):DT(T-68) DT(S69):DA(T-69) DT(S70):DA(T-70) DG(S71):DC(T-71) DA(S72):DT(T-72) DT(S73):DA(T-73) chainK ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP chainQ ( 1) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 1) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/krHrkvlrdniqgitkpairrlarrggVkrisgliyeetrgvlkvFlenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Kaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkte/RKtRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3lel_M:Histone-fold; title=STRUCTURAL INSIGHT INTO THE SEQUENCE-DEPENDENCE OF NUCLEOSOME POSITIONING organism=XENOPUS LAEVIS DNA sequence DA(S-73):DT(T73) DT(S-72):DA(T72) DC(S-71):DG(T71) DA(S-70):DT(T70) DA(S-69):DT(T69) DT(S-68):DA(T68) DA(S-67):DT(T67) DT(S-66):DA(T66) DC(S-65):DG(T65) DC(S-64):DG(T64) DA(S-63):DT(T63) DC(S-62):DG(T62) DC(S-61):DG(T61) DT(S-60):DA(T60) DG(S-59):DC(T59) DC(S-58):DG(T58) DA(S-57):DT(T57) DG(S-56):DC(T56) DA(S-55):DT(T55) DT(S-54):DA(T54) DA(S-53):DT(T53) DC(S-52):DG(T52) DT(S-51):DA(T51) DA(S-50):DT(T50) DC(S-49):DG(T49) DC(S-48):DG(T48) DA(S-47):DT(T47) DA(S-46):DT(T46) DA(S-45):DT(T45) DA(S-44):DT(T44) DG(S-43):DC(T43) DT(S-42):DA(T42) DG(S-41):DC(T41) DT(S-40):DA(T40) DA(S-39):DT(T39) DT(S-38):DA(T38) DT(S-37):DA(T37) DT(S-36):DA(T36) DG(S-35):DC(T35) DA(S-33):DC(T34) DA(S-32):DT(T32) DA(S-31):DT(T31) DC(S-30):DG(T30) DT(S-29):DA(T29) DG(S-28):DC(T28) DC(S-27):DG(T27) DT(S-26):DA(T26) DC(S-25):DG(T25) DC(S-24):DG(T24) DA(S-23):DT(T23) DT(S-22):DA(T22) DC(S-21):DG(T21) DA(S-20):DT(T20) DA(S-19):DT(T19) DA(S-18):DT(T18) DT(S-17):DA(T17) DT(S-16):DA(T16) DA(S-15):DT(T15) DA(S-14):DT(T14) DA(S-13):DT(T13) DT(S-12):DA(T12) DG(S-11):DC(T11) DT(S-10):DA(T10) DT(S-9):DA(T9) DC(S-8):DG(T8) DT(S-7):DA(T7) DT(S-6):DA(T6) DA(S-5):DT(T5) DA(S-4):DT(T4) DA(S-3):DT(T3) DG(S-2):DC(T2) DG(S-1):DC(T1) DA(S0):DT(T0) DC(S1):DG(T-1) DC(S2):DG(T-2) DT(S3):DA(T-3) DT(S4):DA(T-4) DT(S5):DA(T-5) DA(S6):DT(T-6) DA(S7):DT(T-7) DG(S8):DC(T-8) DA(S9):DT(T-9) DA(S10):DT(T-10) DC(S11):DG(T-11) DA(S12):DT(T-12) DT(S13):DA(T-13) DT(S14):DA(T-14) DT(S15):DA(T-15) DA(S16):DT(T-16) DA(S17):DT(T-17) DT(S18):DA(T-18) DT(S19):DA(T-19) DT(S20):DA(T-20) DG(S21):DC(T-21) DA(S22):DT(T-22) DT(S23):DA(T-23) DG(S24):DC(T-24) DG(S25):DC(T-25) DA(S26):DT(T-26) DG(S27):DC(T-27) DC(S28):DG(T-28) DA(S29):DT(T-29) DG(S30):DC(T-30) DT(S31):DA(T-31) DT(S32):DA(T-32) DT(S33):DA(T-33) DC(S34):DG(T-34) DC(S35):DG(T-35) DA(S36):DT(T-36) DA(S37):DT(T-37) DA(S38):DT(T-38) DT(S39):DA(T-39) DA(S40):DT(T-40) DC(S41):DG(T-41) DA(S42):DT(T-42) DC(S43):DG(T-43) DT(S44):DA(T-44) DT(S45):DA(T-45) DT(S46):DA(T-46) DT(S47):DA(T-47) DG(S48):DC(T-48) DG(S49):DC(T-49) DT(S50):DA(T-50) DA(S51):DT(T-51) DG(S52):DC(T-52) DT(S53):DA(T-53) DA(S54):DT(T-54) DT(S55):DA(T-55) DC(S56):DG(T-56) DT(S57):DA(T-57) DG(S58):DC(T-58) DC(S59):DG(T-59) DA(S60):DT(T-60) DG(S61):DC(T-61) DG(S62):DC(T-62) DT(S63):DA(T-63) DG(S64):DC(T-64) DG(S65):DC(T-65) DA(S66):DT(T-66) DT(S67):DA(T-67) DA(S68):DT(T-68) DT(S69):DA(T-69) DT(S70):DA(T-70) DG(S71):DC(T-71) DA(S72):DT(T-72) DT(S73):DA(T-73) chainM ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt >3lja_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=USING SOFT X-RAYS FOR A DETAILED PICTURE OF DIVALENT METAL BINDING IN THE NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 1) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrKgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/KkRRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Kaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/kkrRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3lja_E:Histone-fold; title=USING SOFT X-RAYS FOR A DETAILED PICTURE OF DIVALENT METAL BINDING IN THE NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainE ( 3) HIS39 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >3lk9_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA WITH A GAPPED DNA SUBSTRATE AND DTMP(CF2)P(CF2)P organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 34 0 0 0 0 ( 26) LYS35 6 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3lnq_A:Homeodomain-like; title=STRUCTURE OF ARISTALESS HOMEODOMAIN IN COMPLEX WITH DNA organism=Drosophila melanogaster DNA sequence DC(C1):DG(B14) DC(C2):DG(B13) DC(C3):DG(B12) DT(C4):DA(B11) DA(C5):DT(B10) DA(C6):DT(B9) DT(C7):DA(B8) DT(C8):DA(B7) DA(C9):DT(B6) DA(C10):DT(B5) DA(C11):DT(B4) DC(C12):DG(B3) DC(C13):DG(B2) DC(C14):DG(B1) chainA ( 1) ARG87 0 0 0 0 0 0 4 5 0 0 0 0 0 0 ( 3) ARG89 0 0 0 0 0 0 0 13 6 10 0 0 0 0 ( 45) VAL131 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 48) GLN134 0 0 0 5 0 1 0 0 0 0 0 0 0 0 ( 49) ASN135 0 0 0 0 0 0 10 7 0 0 0 0 0 0 prot.sequence RyRttftsfqleelekafsrthypdvftreelamkiglteariqVwfQNrrakwrkqe >3lsp_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF DEST BOUND TO DESCB PROMOTER AND OLEOYL-COA organism=PSEUDOMONAS AERUGINOSA DNA sequence DT(B5) DC(B6) DA(B7) DG(B8) DT(B9) DG(B10) DA(B11) DA(B12) DC(B13) DG(B14) DC(B15) DT(B16) DT(B17) DG(B18) DT(B19) DT(B20) DG(B21) DA(B22) DC(B23) DT(B24) DC(B25) DG(B26) DA(B27) DT(B28) chainA ( 32) LEU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 33) ARG36 0 0 0 0 0 0 0 0 0 0 0 0 22 12 2 0 0 0 0 0 0 0 0 0 ( 43) PRO46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 44) ALA47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 47) TYR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 ( 48) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence praeqkqqtrhalmsaarhlmesgrgfgslsLRevtraagivPAgfYRhfsdmdqlglalvaevdetfratlravrrnefelgglidasvrifldavganrsqflflareqyggslpirqaiaslrqritddlaadlallnkmphldgaaldvfadlvvktvfatlpelidhlmpaakithqlrfimiggkhwh >3lsr_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF DEST IN COMPLEX WITH DUPLEX DNA organism=PSEUDOMONAS AERUGINOSA DNA sequence DC(B4) DA(B5) DT(B6) DC(B7) DA(B8) DG(B9) DT(B10) DG(B11) DA(B12) DA(B13) DC(B14) DG(B15) DC(B16) DG(B17) DC(B18) DG(B19) DT(B20) DT(B21) DC(B22) DA(B23) DC(B24) DT(B25) DG(B26) DA(B27) DT(B28) DG(B29) DT(B30) chainA ( 32) LEU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 33) ARG36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 2 0 0 0 0 0 0 0 0 0 0 ( 43) PRO46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 44) ALA47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 47) TYR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 prot.sequence praeqkqqtrhalmsaarhlmesgrgfgslsLRevtraagivPAgfYrhfsdmdqlglalvaevdetfratlravrrnefelgglidasvrifldavganrsqflflareqyggslpirqaiaslrqritddlaadlallnkmphldgaaldvfadlvvktvfatlpelidppaakithqlrfimiggkhwh >3ltn_ABCD:Type_II_DNA_topoisomerase; title=INHIBITOR-STABILIZED TOPOISOMERASE IV-DNA CLEAVAGE COMPLEX (S. PNEUMONIAE) organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(G9):DG(H11) DG(G10):DC(H10) DT(G11):DA(H9) DG(G12):DC(H8) DC(G13):DG(H7) DA(G14):DT(H6) DT(G15):DA(H5) DA(F1):DT(H4) DG(F2):DC(H3) DT(F3):DA(H2) DC(F4):DG(H1) DA(F5):DT(E15) DT(F6):DA(E14) DT(F7):DA(E13) DC(F8):DG(E12) DA(F9):DT(E11) DT(F10):DA(E10) DG(F11):DC(E9) chainA ( 18) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 26) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 77) SER79 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 78) SER80 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (115) ARG117 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (168) ILE170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 13 0 0 chainB ( 26) ARG28 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) SER79 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 78) SER80 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (115) ARG117 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (168) ILE170 0 0 13 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 44) LYS458 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 chainD ( 44) LYS458 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqnmsledimgerfgrYskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdSSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssle/niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdSSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssle/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvdfsieanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskkgkkeevayawtdgeleelrkqfgkgatlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvdfsieanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskkgkkeevayawtdgeleelrkqfgkgatlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3ltn_B:Type_II_DNA_topoisomerase; title=INHIBITOR-STABILIZED TOPOISOMERASE IV-DNA CLEAVAGE COMPLEX (S. PNEUMONIAE) organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(E9):DG(F11) DA(E10):DT(F10) DT(E11):DA(F9) DG(E12):DC(F8) DA(E13):DT(F7) DA(E14):DT(F6) DT(E15):DA(F5) DG(H1):DC(F4) DA(H2):DT(F3) DC(H3):DG(F2) DT(H4):DA(F1) DA(H5):DT(G15) DT(H6):DA(G14) DG(H7):DC(G13) DC(H8):DG(G12) DA(H9):DT(G11) DC(H10):DG(G10) DG(H11):DC(G9) chainB ( 26) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 77) SER79 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 78) SER80 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (115) ARG117 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (168) ILE170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 13 0 0 prot.sequence niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdSSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssle >3lwh_A: title=CRYSTAL STRUCTURE OF CREN7-DSDNA COMPLEX organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(C109):DC(B108) DT(C110):DA(B107) DA(C111):DT(B106) DA(C112):DT(B105) DT(C113):DA(B104) DT(C114):DA(B103) DA(C115):DT(B102) DC(C116):DG(B101) chainA ( 25) TRP26 0 0 0 5 9 0 0 0 ( 27) LEU28 0 0 0 0 16 23 0 0 ( 29) PRO30 0 0 0 0 0 4 5 0 ( 35) VAL36 0 0 0 0 0 1 0 0 ( 37) ILE38 0 0 0 0 2 0 0 0 ( 50) ARG51 0 1 9 12 2 0 0 0 prot.sequence ssgkkpvkvktpagkeaelvpekvWaLaPkgrkgVkIglfkdpetgkyfRhklpddypi >3lwi_B: title=CRYSTAL STRUCTURE OF CREN7-DSDNA COMPLEX organism=SULFOLOBUS SOLFATARICUS DNA sequence DG(F109):DC(E108) DC(F110):DG(E107) DG(F111):DC(E106) DA(F112):DT(E105) DT(F113):DA(E104) DC(F114):DG(E103) DG(F115):DC(E102) DC(F116):DG(E101) chainB ( 24) TRP26 0 0 0 4 9 0 0 0 ( 26) LEU28 0 0 0 0 22 20 0 0 ( 28) PRO30 0 0 0 0 0 3 5 0 ( 31) ARG33 0 0 0 0 0 0 0 9 ( 34) VAL36 0 0 0 0 0 5 0 0 ( 36) ILE38 0 0 0 0 3 0 0 0 ( 49) ARG51 0 0 9 16 5 0 0 0 prot.sequence sgkkpvkvktpagkeaelvpekvWaLaPkgRkgVkIglfkdpetgkyfRhklpddypi >3lwl_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF KLENOW FRAGMENT OF TAQ POLYMERASE IN COMPLEX WITH AN ABASIC SITE organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (246) LYS540 0 0 0 0 0 0 0 4 5 0 0 (251) TYR545 0 0 0 0 0 0 0 0 0 1 0 (279) ARG573 0 0 0 0 0 0 0 0 0 0 3 (286) ASN580 0 0 0 0 0 0 0 0 0 1 0 (289) ASN583 0 0 0 0 0 0 0 0 0 11 1 (293) ARG587 0 0 0 0 0 0 0 0 0 0 6 (486) HIS784 0 0 0 0 0 0 0 0 0 0 2 prot.sequence eeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvRtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvprelmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3lwm_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF THE LARGE FRAGMENT OF THERMUS AQUATICUS DNA POLYMERASE I IN COMPLEX WITH A BLUNT-ENDED DNA AND DDATP organism=Thermus aquaticus DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (246) LYS540 0 0 5 4 0 0 0 0 0 0 0 (251) TYR545 0 1 0 0 0 0 0 0 0 0 0 (279) ARG573 4 0 0 0 0 0 0 0 0 0 0 (286) ASN580 0 1 0 0 0 0 0 0 0 0 0 (289) ASN583 1 9 0 0 0 0 0 0 0 0 0 (293) ARG587 6 0 0 0 0 0 0 0 0 0 0 (490) HIS784 1 0 0 0 0 0 0 0 0 0 0 prot.sequence eeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvRtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3lz0_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE COMPOSED OF THE WIDOM 601 DNA SEQUENCE (ORIENTATION 1) organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllRkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/ktrkesyaiyvykvlkqvhPdtgissKamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrlLrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3lz0_F:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE COMPOSED OF THE WIDOM 601 DNA SEQUENCE (ORIENTATION 1) organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >3lz1_A:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE COMPOSED OF THE WIDOM 601 DNA SEQUENCE (ORIENTATION 2) organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >3lz1_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE COMPOSED OF THE WIDOM 601 DNA SEQUENCE (ORIENTATION 2) organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/kvLrdniqgitkpairrlarrggvkriSgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllRkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/ktrkesyaiyvykvlkqvhPdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrlLrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3lzi_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DATP OPPOSITE 7,8- DIHYDRO-8-OXOGUANINE organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 6 7 (707) ARG707 0 0 0 0 0 0 0 0 1 0 0 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKRyalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3lzj_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE 7,8- DIHYDRO-8-OXOGUANINE organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3m4a_A:DNA_breaking-rejoining_enzymes; title=CRYSTAL STRUCTURE OF A BACTERIAL TOPOISOMERASE IB IN COMPLEX WITH DNA REVEALS A SECONDARY DNA BINDING SITE organism=Deinococcus radiodurans DNA sequence DG(D2):DC(E121) DA(D3):DT(E120) DA(D4):DT(E119) DT(D5):DA(E118) DA(D6):DT(E117) DA(D7):DT(E116) DG(D8):DC(E115) DG(D9):DC(E114) DG(D10):DC(E113) DC(D11):DG(E112) DG(D12):DC(E111) DC(D13):DG(E110) chainA ( 81) ARG114 0 0 0 0 0 0 5 1 7 0 0 0 (153) ARG186 0 0 0 0 0 0 0 0 0 12 12 6 prot.sequence psrtellarrariarlavppayqdvyvspdaenelqafgrdaarlqyryhpdfvalkkwqrltrfagalptlkvattadlRasglpprkvmalmtrllhvarfrvgsdiyarqhktyglstlrqrhvvvdgntvtfrfkgkhgvsqhkatsdRtlaanmqklldlpgpwlfqtvdaggerrrihstelnaylrevigpftakdfrtwggtllaaeylaqqgtesserqakkvlvdcvkfvaddlgntpavtrgsyicpvifdryldgkvlddyeprterqeaelegltrsegalkrmlesertl >3m4o_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX B organism=? DNA sequence DC(T1):DG(N14) DT(T2):DA(N13) DA(T3):DT(N12) DC(T4):DG(N11) DC(T6):DG(N9) DA(T7):DT(N8) DT(T8):DA(N7) DA(T9):DT(N6) DA(T10):DT(N5) DC(T11):DG(N4) DC(T12):DG(N3) DC(T14):DT(N2) DC(T15):DG(N1) chainA (1336) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi >3m4o_AE: title=RNA POLYMERASE II ELONGATION COMPLEX B organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(N1):DC(T15) DT(N2):DC(T14) DG(N3):DC(T12) DG(N4):DC(T11) DT(N5):DA(T10) DT(N6):DA(T9) DA(N7):DT(T8) DT(N8):DA(T7) DG(N9):DC(T6) DG(N11):DC(T4) DT(N12):DA(T3) DA(N13):DT(T2) DG(N14):DC(T1) chainA (1336) ARG1386 3 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/dqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >3m7k_A:FYVE/PHD_zinc_finger; title=CRYSTAL STRUCTURE OF PACI-DNA ENZYME PRODUCT COMPLEX organism=PSEUDOMONAS ALCALIGENES DNA sequence DG(B1):DC(C18) DA(B2):DT(C17) DG(B3):DC(C16) DG(B4):DC(C15) DC(B5):DG(C14) DT(B6):DA(C13) DT(B7):DA(C12) DA(B8):DT(C11) chainA ( 6) ARG6 0 0 1 0 0 0 0 0 ( 21) SER21 0 0 0 0 4 0 0 0 ( 23) MET23 0 0 1 0 0 0 0 0 ( 28) MET28 0 0 0 0 3 7 0 0 ( 31) GLN31 0 0 6 2 2 0 0 0 ( 32) ASN32 0 0 0 0 0 10 12 0 ( 35) TYR35 0 0 0 0 9 2 0 0 ( 36) ASN36 0 0 0 0 0 0 10 11 ( 39) LYS39 0 0 0 0 0 6 5 7 ( 40) GLU40 0 0 0 0 0 0 0 4 ( 78) ARG78 0 0 0 0 0 0 0 2 ( 80) ASN80 0 0 0 0 0 4 2 0 ( 81) PRO81 0 0 0 0 0 3 10 3 ( 82) ARG82 0 0 0 0 9 9 1 0 ( 84) TYR84 0 0 0 0 1 4 0 0 (110) PHE110 0 0 0 0 0 0 0 3 (114) ARG114 0 0 0 0 0 0 0 31 prot.sequence mtqcpRcqrnlaadefyagsSkMckgcMtwQNlsYNanKEghantftkatflawyglsaqrhcgycgiseagftslhRtNPRgYhiqclgvdrsdsfegyspqnarlacFicnRiksnifsasemdvlgeaiskawhgrgia >3m8r_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH TRAPPED 4'- ETHYLATED DTTP organism=Thermus aquaticus DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 5 5 0 0 0 0 0 0 0 (280) ARG573 4 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 1 10 1 0 0 0 0 0 0 0 0 (491) HIS784 1 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3m8s_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH TRAPPED 4'- METHYLATED DTTP organism=THERMUS AQUATICUS DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (247) LYS540 0 0 0 0 0 0 0 4 5 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 0 3 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 (290) ASN583 0 0 0 0 0 0 0 0 1 9 1 (491) HIS784 0 0 0 0 0 0 0 0 0 0 1 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3m9e_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=THYROID HORMONE BETA DNA BINDING DOMAIN HOMODIMER WITH INVERTED PALINDROME TRE organism=Rattus norvegicus DNA sequence DA(C1):DT(D22) DT(C2):DA(D21) DT(C3):DA(D20) DG(C4):DC(D19) DA(C5):DT(D18) DC(C6):DG(D17) DC(C7):DG(D16) DT(C8):DA(D15) DC(C9):DG(D14) DA(C10):DT(D13) DG(C11):DC(D12) DC(C12):DG(D11) DT(C13):DA(D10) DG(C14):DC(D9) DA(C15):DT(D8) DG(C16):DC(D7) DG(C17):DC(D6) DT(C18):DA(D5) DC(C19):DG(D4) DA(C20):DT(D3) DA(C21):DT(D2) DT(C22):DA(D1) chainA ( 21) GLU124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 ( 24) LYS127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 2 0 0 0 0 0 ( 28) ARG131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 2 0 0 0 0 ( 29) ARG132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 0 0 ( 84) LYS187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 chainB ( 21) GLU124 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS127 0 0 0 0 0 2 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG131 0 0 0 0 2 15 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG132 0 0 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) LYS187 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence elcvvcgdkatgyhyrcitcEgcKgffRRtiqkslhpsysckyegkciidkvtrnqcqecrfkkciyvgmatdlvlddskrlaKrklieenrekrrreelq/elcvvcgdkatgyhyrcitcEgcKgffRRtiqkslhpsysckyegkciidkvtrnqcqecrfkkciyvgmatdlvlddskrlaKrklieenrekrrree >3m9e_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=THYROID HORMONE BETA DNA BINDING DOMAIN HOMODIMER WITH INVERTED PALINDROME TRE organism=Rattus norvegicus DNA sequence DA(D1):DT(C22) DT(D2):DA(C21) DT(D3):DA(C20) DG(D4):DC(C19) DA(D5):DT(C18) DC(D6):DG(C17) DC(D7):DG(C16) DT(D8):DA(C15) DC(D9):DG(C14) DA(D10):DT(C13) DG(D11):DC(C12) DC(D12):DG(C11) DT(D13):DA(C10) DG(D14):DC(C9) DA(D15):DT(C8) DG(D16):DC(C7) DG(D17):DC(C6) DT(D18):DA(C5) DC(D19):DG(C4) DA(D20):DT(C3) DA(D21):DT(C2) DT(D22):DA(C1) chainB ( 21) GLU124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 5 0 0 0 0 ( 24) LYS127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 2 0 0 0 0 0 ( 28) ARG131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 15 2 0 0 0 0 ( 29) ARG132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 ( 84) LYS187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence elcvvcgdkatgyhyrcitcEgcKgffRRtiqkslhpsysckyegkciidkvtrnqcqecrfkkciyvgmatdlvlddskrlaKrklieenrekrrree >3m9e_EF:Glucocorticoid_receptor-like_DNA-binding_domain; title=THYROID HORMONE BETA DNA BINDING DOMAIN HOMODIMER WITH INVERTED PALINDROME TRE organism=Rattus norvegicus DNA sequence DA(H1):DT(G22) DT(H2):DA(G21) DT(H3):DA(G20) DG(H4):DC(G19) DA(H5):DT(G18) DC(H6):DG(G17) DC(H7):DG(G16) DT(H8):DA(G15) DC(H9):DG(G14) DA(H10):DT(G13) DG(H11):DC(G12) DC(H12):DG(G11) DT(H13):DA(G10) DG(H14):DC(G9) DA(H15):DT(G8) DG(H16):DC(G7) DG(H17):DC(G6) DT(H18):DA(G5) DC(H19):DG(G4) DA(H20):DT(G3) DA(H21):DT(G2) DT(H22):DA(G1) chainE ( 21) GLU124 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS127 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG131 0 0 0 0 2 14 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG132 0 0 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) LYS187 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) GLU124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 5 0 0 0 0 ( 24) LYS127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 ( 28) ARG131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 14 2 0 0 0 0 ( 29) ARG132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 0 0 prot.sequence elcvvcgdkatgyhyrcitcEgcKgffRRtiqkslhpsysckyegkciidkvtrnqcqecrfkkciyvgmatdlvlddskrlaKrklieenrekrrreelqk/elcvvcgdkatgyhyrcitcEgcKgffRRtiqkslhpsysckyegkciidkvtrnqcqecrfkkciyvgmatdlvlddskrlakrklieenrekrrr >3m9m_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF DPO4 IN COMPLEX WITH DNA CONTAINING THE MAJOR CISPLATIN LESION organism=Sulfolobus solfataricus DNA sequence DC(T5):DG(P13) DT(T6):DA(P12) DT(T7):DA(P11) DT(T8):DA(P10) DC(T9):DG(P9) DC(T10):DG(P8) DT(T11):DA(P7) DT(T12):DA(P6) DC(T13):DG(P5) DC(T14):DG(P4) DC(T15):DG(P3) DC(T16):DG(P2) DC(T17):DG(P1) chainB (244) SER244 0 0 0 1 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3m9n_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF DPO4 IN COMPLEX WITH DNA CONTAINING THE MAJOR CISPLATIN LESION organism=Sulfolobus solfataricus DNA sequence DG(P1):DC(T17) DG(P2):DC(T16) DG(P3):DC(T15) DG(P4):DC(T14) DA(P5):DT(T13) DA(P6):DT(T12) DG(P7):DC(T11) DG(P8):DC(T10) DA(P9):DT(T9) DA(P10):DT(T8) DA(P11):DT(T7) DG(P12):DC(T6) DC(P13):DG(T5) chainB (244) SER244 0 0 0 0 0 0 0 0 0 1 0 0 0 (332) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 1 (336) ARG336 0 0 0 0 0 0 0 0 0 1 4 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >3m9o_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF DPO4 IN COMPLEX WITH DNA CONTAINING THE MAJOR CISPLATIN LESION organism=Sulfolobus solfataricus DNA sequence DT(T3):ATP(B2001) DG(T4):DC(P13) DG(T5):DC(P12) DC(T6):DG(P11) DT(T7):DA(P10) DT(T8):DA(P9) DT(T9):DA(P8) DC(T10):DG(P7) DC(T11):DG(P6) DT(T12):DA(P5) DT(T13):DA(P4) DC(T14):DG(P3) DC(T15):DG(P2) DC(T16):DG(P1) chainB ( 7) ASP7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ASP9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) TYR10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) PHE11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) TYR12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL32 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA44 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR45 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) TYR48 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG51 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP105 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) LYS159 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) SER244 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (332) ARG332 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfYaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvrfskfi >3maq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF E.COLI POL II-NORMAL DNA-DGTP TERNARY COMPLEX organism=Escherichia coli DNA sequence DT(T806):DA(P912) DA(T807):DT(P911) DC(T808):DG(P910) DG(T809):DC(P909) DC(T810):DG(P908) DT(T811):DA(P907) DA(T812):DT(P906) DG(T813):DC(P905) DG(T814):DC(P904) DC(T815):DG(P903) DA(T816):DT(P902) DC(T817):DG(P901) chainA (610) LYS615 8 5 0 0 0 0 0 0 0 0 0 0 (633) ARG638 0 0 9 4 0 0 0 0 0 0 0 0 (684) ARG689 0 0 2 6 0 0 0 0 0 0 0 0 prot.sequence phmaqagfiltrhwrdtpqgtevsfwlatdngplqvtlapqesvafipadqvpraqhilqgeqgfrltplalkdfhrqpvyglycrahrqlmnyekrlreggvtvyeadvrpperylmerfitspvwvegdmhngtivnarlkphpdyrpplkwvsidiettrhgelyciglegcgqrivymlgpengdassldfeleyvasrpqlleklnawfanydpdviigwnvvqfdlrmlqkhaeryrlplrlgrdnselewrehgfkngvffaqakgrliidgiealksafwnfssfsletvaqellgegdrmdeidrrfaedkpalatynlkncelvtqifhkteimpflleratvnglpvdrhggsvaafghlyfprmhragyvapnlgevpphaspggyvmdsrpglydsvlvldykslypsiirtflidpvglvegmaqpdpehstegfldawfsrekhclpeivtniwhgrdeakrqgnkplsqalkiimnafygvlgttacrffdprlassitmrghqimrqtkalieaqgydviygdtdstfvwlkgahseeeaakigralvqhvnawwaetlqkqrltsaleleyethfcrflmptirgadtgskKryagliqegdkqrmvfkgletvRtdwtplaqqfqqelylrifrnepyqeyvretidklmageldarlvyrkrlRrplseyqrnvpphvraarladeenqkrgrplqyqnrgtikyvwttngpepldyqrspldyehyltrqlqpvaegilpfiednfatlmtgqlf >3mby_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH TEMPLATE BASE A AND 8OXODGTP IN THE ACTIVE SITE WITH A DIDEOXY TERMINATED PRIMER organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 37 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3mfh_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE ETA IN COMPLEX WITH UNDAMAGED DNA organism=Saccharomyces cerevisiae DNA sequence DA(T7):DT(P10) DG(T8):DC(P9) DG(T9):DC(P8) DG(T10):DC(P7) DG(T11):DC(P6) DA(T12):DT(P5) DG(T13):DC(P4) DG(T14):DC(P3) DA(T15):DT(P2) DC(T16):DG(P1) chainA (394) MET396 4 2 0 0 0 0 0 0 0 0 (454) ARG456 0 0 0 1 8 0 0 0 0 0 (456) SER458 0 0 0 0 0 1 0 0 0 0 prot.sequence mskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvqwnsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvpakqisvedhkvslepyrresrkalaifkwacdlverasidevfldlgricfnmlmfdneyeltgdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvilalgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdydrstsnidplktadlaeklfklsrgryglplssrpvvksmMsnknlrgkscnsivdciswlevfcaeltsriqdleqeynkiviprtvsislktksyevyRkSgpvaykginfqshellkvgikfvtdldikgknksyypltklsmtitnfdiidlq >3mfi_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE ETA IN COMPLEX WITH A CIS-SYN THYMIDINE DIMER organism=Saccharomyces cerevisiae DNA sequence DG(P1):DC(T16) DT(P2):DA(T15) DC(P3):DG(T14) DC(P4):DG(T13) DT(P5):DA(T12) DC(P6):DG(T11) DC(P7):DG(T10) DC(P8):DG(T9) DC(P9):DG(T8) DT(P10):DA(T7) chainA (396) MET396 0 0 0 0 0 0 0 0 0 2 (456) ARG456 0 0 0 0 0 8 1 0 0 0 (458) SER458 0 0 0 0 1 0 0 0 0 0 prot.sequence dphmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvqwnsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpakqisvedhkvslepyrresrkalaifkwacdlverasidevfldlgricfnmlmfdneyeltgdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvilalgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdydsnidplktadlaeklfklsrgryglplssrpvvksmMsnknlrgkscnsivdciswlevfcaeltsriqdleqeynkiviprtvsislktksyevyRkSgpvaykginfqshellkvgikfvtdldikgknksyypltklsmtitnfdiidl >3mfk_A:"Winged_helix"_DNA-binding_domain; title=ETS1 COMPLEX WITH STROMELYSIN-1 PROMOTER DNA organism=Homo sapiens DNA sequence DA(D102):DT(C16) DG(D103):DC(C15) DG(D104):DC(C14) DA(D105):DT(C13) DA(D106):DT(C12) DG(D107):DC(C11) DC(D108):DG(C10) DA(D109):DT(C9) DC(D110):DG(C8) DT(D111):DA(C7) DT(D112):DA(C6) DC(D113):DG(C5) DC(D114):DG(C4) DT(D115):DA(C3) DG(D116):DC(C2) chainA ( 87) LYS388 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 90) ARG391 0 0 0 0 0 0 0 0 0 1 9 17 21 0 0 ( 93) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 12 14 1 ( 94) TYR395 0 0 0 0 0 0 0 0 5 8 5 1 0 0 0 prot.sequence gtfkdyvrdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkpda >3mfk_AB:"Winged_helix"_DNA-binding_domain; title=ETS1 COMPLEX WITH STROMELYSIN-1 PROMOTER DNA organism=Homo sapiens DNA sequence DA(D102):DT(C16) DG(D103):DC(C15) DG(D104):DC(C14) DA(D105):DT(C13) DA(D106):DT(C12) DG(D107):DC(C11) DC(D108):DG(C10) DA(D109):DT(C9) DC(D110):DG(C8) DT(D111):DA(C7) DT(D112):DA(C6) DC(D113):DG(C5) DC(D114):DG(C4) DT(D115):DA(C3) DG(D116):DC(C2) chainA ( 87) LYS388 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 90) ARG391 0 0 0 0 0 0 0 0 0 1 9 17 21 0 0 ( 93) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 12 14 1 ( 94) TYR395 0 0 0 0 0 0 0 0 5 8 5 1 0 0 0 chainB ( 87) LYS388 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG391 0 17 15 10 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG394 5 11 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) TYR395 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 prot.sequence gtfkdyvrdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkpda/gtfkdyvrdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkp >3mgp_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=BINDING OF COBALT IONS TO THE NUCLEOSOME CORE PARTICLE organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/gKkRrktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Kaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/kkrRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3mgp_G:Histone-fold; title=BINDING OF COBALT IONS TO THE NUCLEOSOME CORE PARTICLE organism=? DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainG ( 1) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Kaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >3mgq_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=BINDING OF NICKEL IONS TO THE NUCLEOSOME CORE PARTICLE organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 4) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrKgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/gkkRRktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Kaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/kkrRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3mgq_E:Histone-fold; title=BINDING OF NICKEL IONS TO THE NUCLEOSOME CORE PARTICLE organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >3mgr_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=BINDING OF RUBIDIUM IONS TO THE NUCLEOSOME CORE PARTICLE organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 1) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrKgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/KkRRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Kaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/kkrRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3mgr_D:Histone-fold; title=BINDING OF RUBIDIUM IONS TO THE NUCLEOSOME CORE PARTICLE organism=? DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainD ( 1) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KkRRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3mgs_A:Histone-fold; title=BINDING OF CESIUM IONS TO THE NUCLEOSOME CORE PARTICLE organism=XENOPUS LAEVIS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >3mgs_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=BINDING OF CESIUM IONS TO THE NUCLEOSOME CORE PARTICLE organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 1) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrKgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/KkRRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Kaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/kkrRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3mgv_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRE RECOMBINASE-DNA TRANSITION STATE organism=Enterobacteria phage P1 DNA sequence DA(E2):DT(H20) DT(E3):DA(H19) DA(E4):DT(H18) DA(E5):DT(H17) DC(E6):DG(H16) DT(E7):DA(H15) DT(E8):DA(H14) DC(E9):DG(H13) DG(E10):DC(H12) DT(E11):DA(H11) DA(E12):DT(H10) DT(E13):DA(H9) DA(E14):DT(H8) DG(E15):DC(H7) DC(F1):DG(H6) DA(F2):DT(H5) DT(F3):DA(H4) DA(F4):DT(H3) DT(F5):DA(H2) DG(F6):DC(H1) DC(F7):DG(G15) DT(F8):DA(G14) DA(F9):DT(G13) DT(F10):DA(G12) DA(F11):DT(G11) DC(F12):DG(G10) DG(F13):DC(G9) DA(F14):DT(G8) DA(F15):DT(G7) DG(F16):DC(G6) DT(F17):DA(G5) DT(F18):DA(G4) DA(F19):DT(G3) DT(F20):DA(G2) chainA ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 4 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (224) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 (225) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 5 (238) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 14 8 1 0 0 0 0 0 (241) ALA260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 (301) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 2 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG243 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 6 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 8 17 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRAlEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnIvmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnldsetgamvrlled >3mgv_CD:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRE RECOMBINASE-DNA TRANSITION STATE organism=Enterobacteria phage P1 DNA sequence DA(L2):DT(K20) DT(L3):DA(K19) DA(L4):DT(K18) DA(L5):DT(K17) DC(L6):DG(K16) DT(L7):DA(K15) DT(L8):DA(K14) DC(L9):DG(K13) DG(L10):DC(K12) DT(L11):DA(K11) DA(L12):DT(K10) DT(L13):DA(K9) DA(L14):DT(K8) DG(L15):DC(K7) DC(M1):DG(K6) DA(M2):DT(K5) DT(M3):DA(K4) DA(M4):DT(K3) DT(M5):DA(K2) DG(M6):DC(K1) DC(M7):DG(I15) DT(M8):DA(I14) DA(M9):DT(I13) DT(M10):DA(I12) DA(M11):DT(I11) DC(M12):DG(I10) DG(M13):DC(I9) DA(M14):DT(I8) DA(M15):DT(I7) DG(M16):DC(I6) DT(M17):DA(I5) DT(M18):DA(I4) DA(M19):DT(I3) DT(M20):DA(I2) chainC ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 4 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 11 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG243 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 2 9 15 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 2 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (224) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 (225) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 6 (238) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 14 8 1 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnIvmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnldsetgamvrlled >3mgv_D:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRE RECOMBINASE-DNA TRANSITION STATE organism=Enterobacteria phage P1 DNA sequence DA(L2):DT(K20) DT(L3):DA(K19) DA(L4):DT(K18) DA(L5):DT(K17) DC(L6):DG(K16) DT(L7):DA(K15) DT(L8):DA(K14) DC(L9):DG(K13) DG(L10):DC(K12) DT(L11):DA(K11) DA(L12):DT(K10) DT(L13):DA(K9) DA(L14):DT(K8) DG(L15):DC(K7) DC(M1):DG(K6) DA(M2):DT(K5) DT(M3):DA(K4) DA(M4):DT(K3) DT(M5):DA(K2) DG(M6):DC(K1) DC(M7):DG(I15) DT(M8):DA(I14) DA(M9):DT(I13) DT(M10):DA(I12) DA(M11):DT(I11) DC(M12):DG(I10) DG(M13):DC(I9) DA(M14):DT(I8) DA(M15):DT(I7) DG(M16):DC(I6) DT(M17):DA(I5) DT(M18):DA(I4) DA(M19):DT(I3) DT(M20):DA(I2) chainD ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 2 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (224) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 (225) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 6 (238) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 14 8 1 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnivmnyirnldsetgamvrlled >3mht_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH UNMODIFIED DNA AND ADOHCY organism=HAEMOPHILUS HAEMOLYTICUS DNA sequence DG(C402):DC(D433) DA(C403):DT(D432) DT(C404):DA(D431) DA(C405):DT(D430) DG(C406):DC(D429) DC(C407):DG(D428) DC(C409):DG(D426) DT(C410):DA(D425) DA(C411):DT(D424) DT(C412):DA(D423) DC(C413):DG(D422) chainA ( 86) ILE86 0 0 0 0 0 0 4 4 1 0 0 ( 87) SER87 0 0 0 0 0 8 3 0 0 0 0 (237) GLN237 0 0 0 0 0 29 28 0 0 0 0 (239) GLU239 0 0 0 0 1 1 0 0 0 0 0 (240) ARG240 0 0 0 0 0 0 13 9 0 0 0 (254) TYR254 0 0 0 0 1 0 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvrlgivgkggQgERiystrgiaitlsaYgggifaktggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy >3mip_AB:Homing_endonucleases; title=I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY (-8GCG) organism=SYNTHETIC CONSTRUCT DNA sequence DC(D-12):DG(C12) DG(D-11):DC(C11) DG(D-10):DC(C10) DA(D-9):DT(C9) DG(D-8):DC(C8) DC(D-7):DG(C7) DG(D-6):DC(C6) DG(D-5):DC(C5) DT(D-4):DA(C4) DC(D-3):DG(C3) DT(D-2):DA(C2) DC(D-1):DG(C1) DA(D1):DT(C-1) DC(D2):DG(C-2) DG(D3):DC(C-3) DA(D4):DT(C-4) DC(D5):DG(C-5) DC(D6):DG(C-6) DG(D7):DC(C-7) DC(D8):DG(C-8) DC(D9):DG(C-9) DT(D10):DA(C-10) DG(D11):DC(C-11) DC(D12):DG(C-12) chainA ( 19) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 ( 23) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 0 0 0 0 0 ( 25) GLU30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 ( 27) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 0 0 ( 29) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 ( 30) TYR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 ( 36) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 38) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 18 0 0 0 ( 44) ILE49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 ( 65) ILE70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 6 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 12 0 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 78) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 10 0 0 0 0 0 ( 80) TYR85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 chainB ( 19) SER24 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG28 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU30 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG32 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASP34 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) TYR35 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN41 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG43 0 0 0 15 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE49 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 9 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 12 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG83 0 0 0 0 0 10 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR85 0 0 0 0 0 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tlqpteaayiagfldgdgSiYaRlEpRpDYkdikyQvRlaisfIqrkdkfpylqdiydqlgkrgIlRkdRgDgIadyRiYgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki/tlqpteaayiagfldgdgSiYaRlEpRpDYkdikyQvRlaisfIqrkdkfpylqdiydqlgkrgilRkdRgDgIadyRiYgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki >3mip_B:Homing_endonucleases; title=I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY (-8GCG) organism=SYNTHETIC CONSTRUCT DNA sequence DG(C-12):DC(D12) DC(C-11):DG(D11) DA(C-10):DT(D10) DG(C-9):DC(D9) DG(C-8):DC(D8) DC(C-7):DG(D7) DG(C-6):DC(D6) DG(C-5):DC(D5) DT(C-4):DA(D4) DC(C-3):DG(D3) DG(C-2):DC(D2) DT(C-1):DA(D1) DG(C1):DC(D-1) DA(C2):DT(D-2) DG(C3):DC(D-3) DA(C4):DT(D-4) DC(C5):DG(D-5) DC(C6):DG(D-6) DG(C7):DC(D-7) DC(C8):DG(D-8) DT(C9):DA(D-9) DC(C10):DG(D-10) DC(C11):DG(D-11) DG(C12):DC(D-12) chainB ( 19) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 ( 23) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 0 0 0 0 0 ( 25) GLU30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 ( 27) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 ( 29) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 30) TYR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 ( 36) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 38) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 15 0 0 0 ( 44) ILE49 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 9 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 12 0 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 ( 78) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 10 0 0 0 0 0 ( 80) TYR85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 4 0 0 0 0 0 prot.sequence tlqpteaayiagfldgdgSiYaRlEpRpDYkdikyQvRlaisfIqrkdkfpylqdiydqlgkrgilRkdRgDgIadyRiYgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki >3mis_A:Homing_endonucleases; title=I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY (-8G) organism=SYNTHETIC CONSTRUCT DNA sequence DC(D-12):DG(C12) DG(D-11):DC(C11) DG(D-10):DC(C10) DA(D-9):DT(C9) DG(D-8):DC(C8) DC(D-7):DG(C7) DT(D-6):DA(C6) DG(D-5):DC(C5) DT(D-4):DA(C4) DC(D-3):DG(C3) DT(D-2):DA(C2) DC(D-1):DG(C1) DA(D1):DT(C-1) DC(D2):DG(C-2) DG(D3):DC(C-3) DA(D4):DT(C-4) DC(D5):DG(C-5) DG(D6):DC(C-6) DT(D7):DA(C-7) DC(D8):DG(C-8) DC(D9):DG(C-9) DT(D10):DA(C-10) DG(D11):DC(C-11) DC(D12):DG(C-12) chainA ( 19) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 ( 23) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 ( 25) GLU30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 0 0 ( 27) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 20 0 0 ( 29) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 ( 30) TYR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 ( 36) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 ( 38) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 14 0 0 0 ( 44) ILE49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 13 0 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 80) TYR85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 prot.sequence tlqpteaayiagfldgdgSiYaKlEpRpDYkdikyQvRlaisfIqrkdkfpylqdiydqlgkrgnlRkdRgDgIadytiYgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki >3mis_AB:Homing_endonucleases; title=I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY (-8G) organism=SYNTHETIC CONSTRUCT DNA sequence DC(D-12):DG(C12) DG(D-11):DC(C11) DG(D-10):DC(C10) DA(D-9):DT(C9) DG(D-8):DC(C8) DC(D-7):DG(C7) DT(D-6):DA(C6) DG(D-5):DC(C5) DT(D-4):DA(C4) DC(D-3):DG(C3) DT(D-2):DA(C2) DC(D-1):DG(C1) DA(D1):DT(C-1) DC(D2):DG(C-2) DG(D3):DC(C-3) DA(D4):DT(C-4) DC(D5):DG(C-5) DG(D6):DC(C-6) DT(D7):DA(C-7) DC(D8):DG(C-8) DC(D9):DG(C-9) DT(D10):DA(C-10) DG(D11):DC(C-11) DC(D12):DG(C-12) chainA ( 19) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 ( 23) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 ( 25) GLU30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 0 0 ( 27) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 20 0 0 ( 29) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 ( 30) TYR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 ( 36) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 ( 38) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 14 0 0 0 ( 44) ILE49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 13 0 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 80) TYR85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 chainB ( 19) SER24 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR26 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LYS28 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU30 0 0 0 2 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG32 0 0 17 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASP34 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) TYR35 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN41 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG43 0 0 0 15 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE49 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG72 0 0 0 0 0 0 13 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 1 15 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASP77 0 0 0 0 0 0 0 0 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ILE79 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR85 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tlqpteaayiagfldgdgSiYaKlEpRpDYkdikyQvRlaisfIqrkdkfpylqdiydqlgkrgnlRkdRgDgIadytiYgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki/tlqpteaayiagfldgdgSiYaKlEpRpDYkdikyQvRlaisfIqrkdkfpylqdiydqlgkrgnlRkdRgDgIadytiYgsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki >3mkw_B:KorB_DNA-binding_domain-like; title=STRUCTURE OF SOPB(155-272)-18MER COMPLEX, I23 FORM organism=Escherichia coli DNA sequence DC(U1):DG(T18) DT(U2):DA(T17) DG(U3):DC(T16) DG(U4):DC(T15) DG(U5):DC(T14) DA(U6):DT(T13) DC(U7):DG(T12) DC(U8):DG(T11) DA(U9):DT(T10) DT(U10):DA(T9) DG(U11):DC(T8) DG(U12):DC(T7) DT(U13):DA(T6) DC(U14):DG(T5) DC(U15):DG(T4) DC(U16):DG(T3) DA(U17):DT(T2) DG(U18):DC(T1) chainB ( 24) SER180 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER189 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG190 0 16 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS191 0 0 0 7 10 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ILE192 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG195 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 ( 63) ARG219 0 0 0 0 0 0 7 14 11 0 0 0 0 0 0 0 0 0 prot.sequence ptsayergqryasrlqnefagniSaladaeniSRKIitRcintaklpksvvalfshpgelsaRsgdalqkaftdkeellkqqasnlheqkkagvifeadevitlltsvlktssas >3mky_B:KorB_DNA-binding_domain-like; title=STRUCTURE OF SOPB(155-323)-18MER DNA COMPLEX, I23 FORM organism=Escherichia coli DNA sequence DC(T1):DG(U18) DT(T2):DA(U17) DG(T3):DC(U16) DG(T4):DC(U15) DG(T5):DC(U14) DA(T6):DT(U13) DC(T7):DG(U12) DC(T8):DG(U11) DA(T9):DT(U10) DT(T10):DA(U9) DG(T11):DC(U8) DG(T12):DC(U7) DT(T13):DA(U6) DC(T14):DG(U5) DC(T15):DG(U4) DC(T16):DG(U3) DA(T17):DT(U2) DG(T18):DC(U1) chainB ( 24) SER180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 33) SER189 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 ( 34) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 18 0 ( 35) LYS191 0 0 0 0 0 0 0 0 0 0 0 0 10 8 5 0 0 0 ( 36) ILE192 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 ( 39) ARG195 0 0 0 0 0 0 0 0 0 0 2 10 1 0 0 0 0 0 ( 63) ARG219 0 0 0 0 0 0 0 0 0 15 13 7 0 0 0 0 0 0 prot.sequence ptsayergqryasrlqnefagniSaladaeniSRKIitRcintaklpksvvalfshpgelsaRsgdalqkaftdkeellkqqasnlheqkkagvifeadevitlltsvlktssas >3mkz_A:KorB_DNA-binding_domain-like; title=STRUCTURE OF SOPB(155-272)-18MER COMPLEX, P21 FORM organism=Escherichia coli DNA sequence DC(C1):DG(D18) DT(C2):DA(D17) DG(C3):DC(D16) DG(C4):DC(D15) DG(C5):DC(D14) DA(C6):DT(D13) DC(C7):DG(D12) DC(C8):DG(D11) DA(C9):DT(D10) DT(C10):DA(D9) DG(C11):DC(D8) DG(C12):DC(D7) DT(C13):DA(D6) DC(C14):DG(D5) DC(C15):DG(D4) DC(C16):DG(D3) DA(C17):DT(D2) DG(C18):DC(D1) chainA ( 24) SER180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 33) SER189 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 ( 34) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 17 0 ( 35) LYS191 0 0 0 0 0 0 0 0 0 0 0 0 5 14 7 0 0 0 ( 36) ILE192 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 39) ARG195 0 0 0 0 0 0 0 0 0 0 2 9 1 0 0 0 0 0 ( 63) ARG219 0 0 0 0 0 0 0 0 0 12 20 6 0 0 0 0 0 0 prot.sequence ptsayergqryasrlqnefagniSaladaeniSRKIitRcintaklpksvvalfshpgelsaRsgdalqkaftdkeellkqqasnlheqkkagvifeadevitlltsvlkts >3mkz_AN:KorB_DNA-binding_domain-like; title=STRUCTURE OF SOPB(155-272)-18MER COMPLEX, P21 FORM organism=Escherichia coli DNA sequence DC(C1):DG(D18) DT(C2):DA(D17) DG(C3):DC(D16) DG(C4):DC(D15) DG(C5):DC(D14) DA(C6):DT(D13) DC(C7):DG(D12) DC(C8):DG(D11) DA(C9):DT(D10) DT(C10):DA(D9) DG(C11):DC(D8) DG(C12):DC(D7) DT(C13):DA(D6) DC(C14):DG(D5) DC(C15):DG(D4) DC(C16):DG(D3) DA(C17):DT(D2) DG(C18):DC(D1) chainA ( 24) SER180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 33) SER189 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 ( 34) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 17 0 ( 35) LYS191 0 0 0 0 0 0 0 0 0 0 0 0 5 14 7 0 0 0 ( 36) ILE192 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 39) ARG195 0 0 0 0 0 0 0 0 0 0 2 9 1 0 0 0 0 0 ( 63) ARG219 0 0 0 0 0 0 0 0 0 12 20 6 0 0 0 0 0 0 chainN ( 33) SER189 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG190 0 14 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS191 0 0 0 7 13 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ILE192 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG195 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 ( 63) ARG219 0 0 0 0 0 0 7 18 11 0 0 0 0 0 0 0 0 0 prot.sequence ptsayergqryasrlqnefagniSaladaeniSRKIitRcintaklpksvvalfshpgelsaRsgdalqkaftdkeellkqqasnlheqkkagvifeadevitlltsvlkts/ptsayergqryasrlqnefagnisaladaeniSRKIitRcintaklpksvvalfshpgelsaRsgdalqkaftdkeellkqqasnlheqkkagvifeadevitlltsvlk >3mln_A: title=DNA BINDING DOMAIN OF EARLY B-CELL FACTOR 1 (EBF1) BOUND TO DNA (CRYSTAL FORM II) organism=Mus musculus DNA sequence DC(D1):DG(C22) DT(D2):DA(C21) DT(D3):DA(C20) DT(D4):DA(C19) DA(D5):DT(C18) DT(D6):DA(C17) DT(D7):DA(C16) DC(D8):DG(C15) DC(D9):DG(C14) DC(D10):DG(C13) DA(D11):DT(C12) DT(D12):DA(C11) DG(D13):DC(C10) DG(D14):DC(C9) DG(D15):DC(C8) DA(D16):DT(C7) DA(D17):DT(C6) DT(D18):DA(C5) DA(D19):DT(C4) DA(D20):DT(C3) DA(D21):DT(C2) DG(D22):DC(C1) chainA ( 29) ARG63 0 0 0 0 0 0 0 0 3 13 15 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER65 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN66 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (129) ARG163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 (138) ASN172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (168) ALA202 0 0 0 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ASN204 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ASN236 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ASN237 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) SER238 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 (205) LYS239 0 0 0 0 0 1 2 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvldantaaqsgvglarahfekqppsnlRkSNffhfvlalydrqgqpveiertafvgfvekekeansektnngihyrlqllysngirteqdfyvrlidsmtkqaivyegqdknpemcrvlltheimcsRccdkkscgNrnetpsdpviidrfflkfflkcnqnclknAgNprdmrrfqvvvsttvnvdghvlavsdnmfvhNNSKh >3mln_AB: title=DNA BINDING DOMAIN OF EARLY B-CELL FACTOR 1 (EBF1) BOUND TO DNA (CRYSTAL FORM II) organism=Mus musculus DNA sequence DC(D1):DG(C22) DT(D2):DA(C21) DT(D3):DA(C20) DT(D4):DA(C19) DA(D5):DT(C18) DT(D6):DA(C17) DT(D7):DA(C16) DC(D8):DG(C15) DC(D9):DG(C14) DC(D10):DG(C13) DA(D11):DT(C12) DT(D12):DA(C11) DG(D13):DC(C10) DG(D14):DC(C9) DG(D15):DC(C8) DA(D16):DT(C7) DA(D17):DT(C6) DT(D18):DA(C5) DA(D19):DT(C4) DA(D20):DT(C3) DA(D21):DT(C2) DG(D22):DC(C1) chainA ( 29) ARG63 0 0 0 0 0 0 0 0 3 13 15 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER65 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN66 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (129) ARG163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 (138) ASN172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (168) ALA202 0 0 0 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ASN204 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ASN236 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ASN237 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) SER238 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 (205) LYS239 0 0 0 0 0 1 2 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 29) ARG63 0 0 0 0 0 0 0 0 0 0 0 15 12 2 0 0 0 0 0 0 0 0 ( 31) SER65 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 32) ASN66 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (129) ARG163 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) ASN172 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ALA202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 (170) ASN204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 (202) ASN236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (203) ASN237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 (204) SER238 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 (205) LYS239 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 1 0 0 0 0 0 prot.sequence gvldantaaqsgvglarahfekqppsnlRkSNffhfvlalydrqgqpveiertafvgfvekekeansektnngihyrlqllysngirteqdfyvrlidsmtkqaivyegqdknpemcrvlltheimcsRccdkkscgNrnetpsdpviidrfflkfflkcnqnclknAgNprdmrrfqvvvsttvnvdghvlavsdnmfvhNNSKh/gvldantaaqsgvglarahfekqppsnlRkSNffhfvlalydrqgqpveiertafvgfvekekeansektnngihyrlqllysngirteqdfyvrlidsmtkqaivyegqdknpemcrvlltheimcsRccdkkscgNrnetpsdpviidrfflkfflkcnqnclknAgNprdmrrfqvvvsttvnvdghvlavsdnmfvhNNSKhgenlyfq >3mlo_A: title=DNA BINDING DOMAIN OF EARLY B-CELL FACTOR 1 (EBF1) BOUND TO DNA (CRYSTAL FORM I) organism=Mus musculus DNA sequence DC(D1):DG(C22) DT(D2):DA(C21) DT(D3):DA(C20) DT(D4):DA(C19) DA(D5):DT(C18) DT(D6):DA(C17) DT(D7):DA(C16) DC(D8):DG(C15) DC(D9):DG(C14) DC(D10):DG(C13) DA(D11):DT(C12) DT(D12):DA(C11) DG(D13):DC(C10) DG(D14):DC(C9) DG(D15):DC(C8) DA(D16):DT(C7) DA(D17):DT(C6) DT(D18):DA(C5) DA(D19):DT(C4) DA(D20):DT(C3) DA(D21):DT(C2) DG(D22):DC(C1) chainA ( 29) ARG63 0 0 0 0 0 0 0 0 2 12 17 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER65 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN66 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 (129) ARG163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 (138) ASN172 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (168) ALA202 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ASN204 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ASN236 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ASN237 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) SER238 0 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 (205) LYS239 0 0 0 0 0 1 2 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvldantaaqsgvglarahfekqppsnlRkSNffhfvlalydrqgqpveiertafvgfvekekeansektnngihyrlqllysngirteqdfyvrlidsmtkqaivyegqdknpemcrvlltheimcsRccdkkscgNrnetpsdpviidrfflkfflkcnqnclknAgNprdmrrfqvvvsttvnvdghvlavsdnmfvhNNSKhgenlyf >3mlo_AB: title=DNA BINDING DOMAIN OF EARLY B-CELL FACTOR 1 (EBF1) BOUND TO DNA (CRYSTAL FORM I) organism=Mus musculus DNA sequence DC(C1):DG(D22) DT(C2):DA(D21) DT(C3):DA(D20) DT(C4):DA(D19) DA(C5):DT(D18) DT(C6):DA(D17) DT(C7):DA(D16) DC(C8):DG(D15) DC(C9):DG(D14) DC(C10):DG(D13) DA(C11):DT(D12) DT(C12):DA(D11) DG(C13):DC(D10) DG(C14):DC(D9) DG(C15):DC(D8) DA(C16):DT(D7) DA(C17):DT(D6) DT(C18):DA(D5) DA(C19):DT(D4) DA(C20):DT(D3) DA(C21):DT(D2) DG(C22):DC(D1) chainA ( 29) ARG63 0 0 0 0 0 0 0 0 0 0 0 17 12 2 0 0 0 0 0 0 0 0 ( 31) SER65 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 32) ASN66 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (129) ARG163 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) ASN172 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ALA202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (170) ASN204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 (202) ASN236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (203) ASN237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 (204) SER238 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 (205) LYS239 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 2 1 0 0 0 0 0 chainB ( 29) ARG63 0 0 0 0 0 0 0 0 2 12 14 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER65 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN66 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (129) ARG163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 (138) ASN172 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 (168) ALA202 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ASN204 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ASN236 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ASN237 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) SER238 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 (205) LYS239 0 0 0 0 0 1 2 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvldantaaqsgvglarahfekqppsnlRkSNffhfvlalydrqgqpveiertafvgfvekekeansektnngihyrlqllysngirteqdfyvrlidsmtkqaivyegqdknpemcrvlltheimcsRccdkkscgNrnetpsdpviidrfflkfflkcnqnclknAgNprdmrrfqvvvsttvnvdghvlavsdnmfvhNNSKhgenlyf/gvldantaaqsgvglarahfekqppsnlRkSNffhfvlalydrqgqpveiertafvgfvekekeansektnngihyrlqllysngirteqdfyvrlidsmtkqaivyegqdknpemcrvlltheimcsRccdkkscgNrnetpsdpviidrfflkfflkcnqnclknAgNprdmrrfqvvvsttvnvdghvlavsdnmfvhNNSKhgenlyfq >3mlp_EF:E_set_domains; title=EARLY B-CELL FACTOR 1 (EBF1) BOUND TO DNA organism=Mus musculus DNA sequence DC(H1):DG(G22) DT(H2):DA(G21) DT(H3):DA(G20) DT(H4):DA(G19) DA(H5):DT(G18) DT(H6):DA(G17) DT(H7):DA(G16) DC(H8):DG(G15) DC(H9):DG(G14) DC(H10):DG(G13) DA(H11):DT(G12) DT(H12):DA(G11) DG(H13):DC(G10) DG(H14):DC(G9) DG(H15):DC(G8) DA(H16):DT(G7) DA(H17):DT(G6) DT(H18):DA(G5) DA(H19):DT(G4) DA(H20):DT(G3) DA(H21):DT(G2) DG(H22):DC(G1) chainE ( 28) ARG63 0 0 0 0 0 0 0 0 2 10 18 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER65 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 31) ASN66 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (128) ARG163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 (137) ASN172 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (167) ALA202 0 0 0 0 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ASN204 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) ASN236 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ASN237 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) SER238 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 (204) LYS239 0 0 0 0 0 0 2 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 28) ARG63 0 0 0 0 0 0 0 0 0 0 0 18 10 2 0 0 0 0 0 0 0 0 ( 30) SER65 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 31) ASN66 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (128) ARG163 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) ASN172 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ALA202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 (169) ASN204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 (201) ASN236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (202) ASN237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 (203) SER238 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 (204) LYS239 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 0 prot.sequence vldantaaqsgvglarahfekqppsnlRkSNffhfvlalydrqgqpveiertafvgfvekekeansektnngihyrlqllysngirteqdfyvrlidsmtkqaivyegqdknpemcrvlltheimcsRccdkkscgNrnetpsdpviidrfflkfflkcnqnclknAgNprdmrrfqvvvsttvnvdghvlavsdnmfvhNNSKhgrrarrldpseaatpcikaispsegwttggatviiigdnffdglqvifgtmlvwselitphairvqtpprhipgvvevtlsykskqfckgtpgrfiyt/vldantaaqsgvglarahfekqppsnlRkSNffhfvlalydrqgqpveiertafvgfvekekeansektnngihyrlqllysngirteqdfyvrlidsmtkqaivyegqdknpemcrvlltheimcsRccdkkscgNrnetpsdpviidrfflkfflkcnqnclknAgNprdmrrfqvvvsttvnvdghvlavsdnmfvhNNSKhgseaatpcikaispsegwttggatviiigdnffdglqvifgtmlvwselitphairvqtpprhipgvvevtlsykskqfckgtpgrfiytaln >3mlp_F:E_set_domains; title=EARLY B-CELL FACTOR 1 (EBF1) BOUND TO DNA organism=Mus musculus DNA sequence DC(G1):DG(H22) DT(G2):DA(H21) DT(G3):DA(H20) DT(G4):DA(H19) DA(G5):DT(H18) DT(G6):DA(H17) DT(G7):DA(H16) DC(G8):DG(H15) DC(G9):DG(H14) DC(G10):DG(H13) DA(G11):DT(H12) DT(G12):DA(H11) DG(G13):DC(H10) DG(G14):DC(H9) DG(G15):DC(H8) DA(G16):DT(H7) DA(G17):DT(H6) DT(G18):DA(H5) DA(G19):DT(H4) DA(G20):DT(H3) DA(G21):DT(H2) DG(G22):DC(H1) chainF ( 28) ARG63 0 0 0 0 0 0 0 0 2 10 18 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER65 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 31) ASN66 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 (128) ARG163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 (137) ASN172 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (167) ALA202 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ASN204 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) ASN236 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ASN237 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) SER238 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 (204) LYS239 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vldantaaqsgvglarahfekqppsnlRkSNffhfvlalydrqgqpveiertafvgfvekekeansektnngihyrlqllysngirteqdfyvrlidsmtkqaivyegqdknpemcrvlltheimcsRccdkkscgNrnetpsdpviidrfflkfflkcnqnclknAgNprdmrrfqvvvsttvnvdghvlavsdnmfvhNNSKhgseaatpcikaispsegwttggatviiigdnffdglqvifgtmlvwselitphairvqtpprhipgvvevtlsykskqfckgtpgrfiytaln >3mnn_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=A RUTHENIUM ANTITUMOUR AGENT FORMS SPECIFIC HISTONE PROTEIN ADDUCTS IN THE NUCLEOSOME CORE organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-33):DC(J34) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DA(I21):DC(J-20) DT(I22):DT(J-21) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DA(J-52) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgisskaMsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3mnn_D:Histone-fold; title=A RUTHENIUM ANTITUMOUR AGENT FORMS SPECIFIC HISTONE PROTEIN ADDUCTS IN THE NUCLEOSOME CORE organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-33):DC(J34) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DA(I21):DC(J-20) DT(I22):DT(J-21) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DA(J-52) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3mq6_AB:Restriction_endonuclease-like; title=DOMAIN SWAPPED SGRAI WITH DNA AND CALCIUM BOUND organism=Streptomyces griseus DNA sequence DA(L2):DT(K17) DG(L3):DC(K16) DT(L4):DA(K15) DC(L5):DG(K14) DC(L6):DG(K13) DA(L7):DT(K12) DC(L8):DG(K11) DC(L9):DG(K10) DG(L10):DC(K9) DG(L11):DC(K8) DT(L12):DA(K7) DG(L13):DC(K6) DG(L14):DC(K5) DA(L15):DT(K4) DC(L16):DG(K3) DT(L17):DA(K2) chainA ( 24) ARG31 0 0 0 0 0 0 0 0 0 0 15 13 2 0 0 0 ( 29) GLN36 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 85) ASN92 0 0 0 0 0 0 0 0 10 13 0 0 0 0 0 0 ( 89) LYS96 0 0 0 0 0 0 0 0 0 6 4 10 0 0 0 0 (145) ARG152 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 (237) SER244 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (239) ARG246 0 0 0 0 0 9 16 18 0 0 0 0 0 0 0 0 (240) SER247 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (241) ASP248 0 0 0 0 0 2 10 5 0 0 0 0 0 0 0 0 (242) ARG249 0 0 0 0 0 0 0 18 9 0 0 0 0 0 0 0 chainB ( 30) ARG31 0 0 0 2 14 15 0 0 0 0 0 0 0 0 0 0 ( 35) GLN36 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 11 9 0 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 10 4 4 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 18 18 7 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 5 13 3 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 9 16 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakaKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng/pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng >3mq6_CD:Restriction_endonuclease-like; title=DOMAIN SWAPPED SGRAI WITH DNA AND CALCIUM BOUND organism=Streptomyces griseus DNA sequence DA(N2):DT(M17) DG(N3):DC(M16) DT(N4):DA(M15) DC(N5):DG(M14) DC(N6):DG(M13) DA(N7):DT(M12) DC(N8):DG(M11) DC(N9):DG(M10) DG(N10):DC(M9) DG(N11):DC(M8) DT(N12):DA(M7) DG(N13):DC(M6) DG(N14):DC(M5) DA(N15):DT(M4) DC(N16):DG(M3) DT(N17):DA(M2) chainC ( 30) ARG31 0 0 0 2 14 16 0 0 0 0 0 0 0 0 0 0 ( 35) GLN36 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 13 9 0 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 11 4 5 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 18 17 9 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 5 10 3 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 10 18 0 0 0 0 0 0 0 chainD ( 24) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 25) ARG31 0 0 0 0 0 0 0 0 0 0 12 11 2 0 0 0 ( 86) ASN92 0 0 0 0 0 0 0 1 9 11 0 0 0 0 0 0 ( 89) ALA95 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 90) LYS96 0 0 0 0 0 0 0 0 0 4 4 13 0 0 0 0 (146) ARG152 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 (238) SER244 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (240) ARG246 0 0 0 0 0 9 18 20 0 0 0 0 0 0 0 0 (241) SER247 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (242) ASP248 0 0 0 0 0 3 13 5 0 0 0 0 0 0 0 0 (243) ARG249 0 0 0 0 0 0 0 15 9 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglasavhrairelyvpptaadlarrffaflnermelvng/pftysieatrnlatterciqdirNRstqfqlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng >3mq6_EF:Restriction_endonuclease-like; title=DOMAIN SWAPPED SGRAI WITH DNA AND CALCIUM BOUND organism=Streptomyces griseus DNA sequence DA(P2):DT(O17) DG(P3):DC(O16) DT(P4):DA(O15) DC(P5):DG(O14) DC(P6):DG(O13) DA(P7):DT(O12) DC(P8):DG(O11) DC(P9):DG(O10) DG(P10):DC(O9) DG(P11):DC(O8) DT(P12):DA(O7) DG(P13):DC(O6) DG(P14):DC(O5) DA(P15):DT(O4) DC(P16):DG(O3) DT(P17):DA(O2) chainE ( 25) ARG31 0 0 0 0 0 0 0 0 0 0 15 13 4 0 0 0 ( 86) ASN92 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 ( 89) ALA95 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 90) LYS96 0 0 0 0 0 0 0 0 0 5 3 10 0 0 0 0 (146) ARG152 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 (238) SER244 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (240) ARG246 0 0 0 0 0 9 17 19 0 0 0 0 0 0 0 0 (241) SER247 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (242) ASP248 0 0 0 0 0 3 12 5 0 0 0 0 0 0 0 0 (243) ARG249 0 0 0 0 0 0 0 17 9 0 0 0 0 0 0 0 chainF ( 30) ARG31 0 0 0 2 14 15 0 0 0 0 0 0 0 0 0 0 ( 35) GLN36 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 11 10 0 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 9 4 5 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 19 17 6 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 5 13 3 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 11 18 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnRstqfqlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng/pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng >3mq6_G:Restriction_endonuclease-like; title=DOMAIN SWAPPED SGRAI WITH DNA AND CALCIUM BOUND organism=Streptomyces griseus DNA sequence DA(Q2):DT(R17) DG(Q3):DC(R16) DT(Q4):DA(R15) DC(Q5):DG(R14) DC(Q6):DG(R13) DA(Q7):DT(R12) DC(Q8):DG(R11) DC(Q9):DG(R10) DG(Q10):DC(R9) DG(Q11):DC(R8) DT(Q12):DA(R7) DG(Q13):DC(R6) DG(Q14):DC(R5) DA(Q15):DT(R4) DC(Q16):DG(R3) DT(Q17):DA(R2) chainG ( 30) ARG31 0 0 0 3 12 14 0 0 0 0 0 0 0 0 0 0 ( 35) GLN36 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 11 10 0 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 9 4 5 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 18 17 7 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 5 11 1 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 10 17 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegvhrairelyvpptaadlarrffaflnermelvng >3mq6_GH:Restriction_endonuclease-like; title=DOMAIN SWAPPED SGRAI WITH DNA AND CALCIUM BOUND organism=Streptomyces griseus DNA sequence DA(Q2):DT(R17) DG(Q3):DC(R16) DT(Q4):DA(R15) DC(Q5):DG(R14) DC(Q6):DG(R13) DA(Q7):DT(R12) DC(Q8):DG(R11) DC(Q9):DG(R10) DG(Q10):DC(R9) DG(Q11):DC(R8) DT(Q12):DA(R7) DG(Q13):DC(R6) DG(Q14):DC(R5) DA(Q15):DT(R4) DC(Q16):DG(R3) DT(Q17):DA(R2) chainG ( 30) ARG31 0 0 0 3 12 14 0 0 0 0 0 0 0 0 0 0 ( 35) GLN36 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 11 10 0 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 9 4 5 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 18 17 7 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 5 11 1 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 10 17 0 0 0 0 0 0 0 chainH ( 28) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 5 ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 14 13 2 0 0 0 ( 35) GLN36 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 11 13 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 5 5 11 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 8 17 20 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 3 12 5 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 17 9 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegvhrairelyvpptaadlarrffaflnermelvng/pftysieatrnlatterciqdirnapvRnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakaKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegavhrairelyvpptaadlarrffaflnermelvng >3mqy_A:Restriction_endonuclease-like; title=SGRAI WITH CLEAVED DNA AND MAGNESIUM BOUND organism=Streptomyces griseus DNA sequence DG(E1):DC(D18) DA(E2):DT(D17) DG(E3):DC(D16) DT(E4):DA(D15) DC(E5):DG(D14) DC(E6):DG(D13) DA(E7):DT(D12) DC(F8):DG(D11) DC(F9):DG(D10) DG(F10):DC(D9) DG(F11):DC(D8) DT(F12):DA(C7) DG(F13):DC(C6) DG(F14):DC(C5) DA(F15):DT(C4) DC(F16):DG(C3) DT(F17):DA(C2) DC(F18):DG(C1) chainA ( 30) ARG31 0 0 0 0 2 12 14 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN36 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 10 3 5 0 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 0 11 7 1 0 0 0 0 0 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 0 16 16 6 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 0 5 12 1 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 9 16 0 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng >3mqy_AB:Restriction_endonuclease-like; title=SGRAI WITH CLEAVED DNA AND MAGNESIUM BOUND organism=Streptomyces griseus DNA sequence DG(C1):DC(F18) DA(C2):DT(F17) DG(C3):DC(F16) DT(C4):DA(F15) DC(C5):DG(F14) DC(C6):DG(F13) DA(C7):DT(F12) DC(D8):DG(F11) DC(D9):DG(F10) DG(D10):DC(F9) DG(D11):DC(F8) DT(D12):DA(E7) DG(D13):DC(E6) DG(D14):DC(E5) DA(D15):DT(E4) DC(D16):DG(E3) DT(D17):DA(E2) DC(D18):DG(E1) chainA ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 0 14 12 2 0 0 0 0 ( 35) GLN36 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 0 5 3 10 0 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 1 7 11 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 6 16 16 0 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 1 12 5 0 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 16 9 0 0 0 0 0 0 0 0 chainB ( 30) ARG31 0 0 0 0 2 11 14 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN36 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 12 3 5 0 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 0 9 10 2 0 0 0 0 0 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 0 18 17 9 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 0 5 10 2 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 9 19 0 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng/pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng >3mr2_A:DNA/RNA_polymerases; title=HUMAN DNA POLYMERASE ETA IN COMPLEX WITH NORMAL DNA AND INCOMING NUCLEOTIDE (NRM) organism=Homo sapiens DNA sequence DA(P2):DT(T13) DG(P3):DC(T12) DC(P4):DG(T11) DG(P5):DC(T10) DT(P6):DA(T9) DC(P7):DG(T8) DA(P8):DT(T7) DT(P9):DA(T6) chainA (322) SER322 0 0 0 0 0 0 3 1 (378) LEU378 0 0 0 0 0 2 5 0 (382) ARG382 0 0 19 11 0 0 0 0 (419) MET421 0 0 0 0 0 0 1 0 (421) PHE423 0 0 0 0 0 0 5 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgtewsppltMlFlcatkfsas >3mr3_A:DNA/RNA_polymerases; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX WITH THE 3'T OF A CPD IN THE ACTIVE SITE (TT1) organism=Homo sapiens DNA sequence DA(P2):DT(T11) DG(P3):DC(T10) DC(P4):DG(T9) DG(P5):DC(T8) DT(P6):DA(T7) DC(P7):DG(T6) DA(P8):DT(T5) DT(P9):DA(T4) chainA (318) SER322 0 0 0 0 0 0 2 0 (374) LEU378 0 0 0 0 0 2 5 0 (378) ARG382 0 0 18 10 0 0 0 0 (419) PHE423 0 0 0 0 0 0 1 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqpisadllpstyieglpqgetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >3mr5_A:DNA/RNA_polymerases; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX WITH A CPD 1BP UPSTREAM OF THE ACTIVE SITE (TT3) organism=Homo sapiens DNA sequence DA(T3):DA(P9) DC(T4):DA(P8) DA(T6):DT(P7) DT(T7):DA(P6) DG(T8):DC(P5) DA(T9):DT(P4) DC(T10):DG(P3) DG(T11):DC(P2) DA(T12):DA(P1) chainA ( 39) GLN38 0 5 0 0 0 0 0 0 0 ( 49) ILE48 4 1 0 0 0 0 0 0 0 ( 62) ARG61 4 0 0 0 0 0 0 0 0 ( 63) SER62 8 0 0 0 0 0 0 0 0 (316) THR318 0 0 0 1 0 0 0 0 0 (380) ARG382 0 0 0 0 0 5 1 0 0 prot.sequence hmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtRSmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpkTigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >3mr6_A:DNA/RNA_polymerases; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX WITH A CPD 2BP UPSTREAM OF THE ACTIVE SITE (TT4) organism=Homo sapiens DNA sequence DT(T3):DT(P9) DC(T4):DA(P8) DA(T5):DA(P7) DA(T7):DT(P6) DC(T8):DG(P5) DG(T9):DC(P4) DA(T10):DT(P3) DG(T11):DC(P2) DC(T12):DT(P1) chainA ( 41) GLN38 16 5 0 0 0 0 0 0 0 ( 42) TYR39 2 0 0 0 0 0 0 0 0 ( 51) ILE48 5 1 0 0 0 0 0 0 0 ( 64) ARG61 9 0 0 0 0 0 0 0 0 ( 65) SER62 1 0 0 0 0 0 0 0 0 (375) LEU378 0 0 1 0 0 0 0 0 0 (379) ARG382 0 0 0 0 0 1 6 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQYkswkgggiIavsyearafgvtRSmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftviknmntsgtewsppltmlflcatkfsas >3mu6_AB:SRF-like; title=INHIBITING THE BINDING OF CLASS IIA HISTONE DEACETYLASES TO MYOCYTE ENHANCER FACTOR-2 BY SMALL MOLECULES organism=Homo sapiens DNA sequence DA(E2):DT(F17) DA(E3):DT(F16) DG(E4):DC(F15) DC(E5):DG(F14) DT(E6):DA(F13) DA(E7):DT(F12) DT(E8):DA(F11) DT(E9):DA(F10) DA(E10):DT(F9) DT(E11):DA(F8) DT(E12):DA(F7) DA(E13):DT(F6) DG(E14):DC(F5) DC(E15):DG(F4) DT(E16):DA(F3) DT(E17):DA(F2) chainA ( 2) ARG3 0 0 0 0 0 0 0 0 0 0 8 14 5 0 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 0 5 5 1 0 0 chainB ( 2) ARG3 0 0 0 5 14 8 0 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 1 5 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkytay/gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkytay >3mu6_CD:SRF-like; title=INHIBITING THE BINDING OF CLASS IIA HISTONE DEACETYLASES TO MYOCYTE ENHANCER FACTOR-2 BY SMALL MOLECULES organism=Homo sapiens DNA sequence DA(H2):DT(G17) DA(H3):DT(G16) DG(H4):DC(G15) DC(H5):DG(G14) DT(H6):DA(G13) DA(H7):DT(G12) DA(H8):DT(G11) DT(H9):DA(G10) DA(H10):DT(G9) DA(H11):DT(G8) DT(H12):DA(G7) DA(H13):DT(G6) DG(H14):DC(G5) DC(H15):DG(G4) DT(H16):DA(G3) DT(H17):DA(G2) chainC ( 2) ARG3 0 0 0 5 15 9 0 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 1 5 5 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG3 0 0 0 0 0 0 0 0 0 0 8 14 5 0 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 0 5 5 1 0 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkytay/gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkytay >3mu6_D:SRF-like; title=INHIBITING THE BINDING OF CLASS IIA HISTONE DEACETYLASES TO MYOCYTE ENHANCER FACTOR-2 BY SMALL MOLECULES organism=Homo sapiens DNA sequence DA(G2):DT(H17) DA(G3):DT(H16) DG(G4):DC(H15) DC(G5):DG(H14) DT(G6):DA(H13) DA(G7):DT(H12) DT(G8):DA(H11) DT(G9):DA(H10) DA(G10):DT(H9) DT(G11):DA(H8) DT(G12):DA(H7) DA(G13):DT(H6) DG(G14):DC(H5) DC(G15):DG(H4) DT(G16):DA(H3) DT(G17):DA(H2) chainD ( 2) ARG3 0 0 0 5 14 8 0 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 1 5 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkytay >3mva_O: title=CRYSTAL STRUCTURE OF HUMAN MTERF1 BOUND TO THE TERMINATION SEQUENCE organism=Homo sapiens DNA sequence DA(D1):DT(E22) DT(D2):DA(E21) DT(D3):DA(E20) DA(D4):DT(E19) DC(D5):DG(E18) DC(D6):DG(E17) DG(D7):DC(E16) DG(D8):DC(E15) DG(D9):DC(E14) DC(D10):DG(E13) DT(D11):DA(E12) DC(D12):DG(E11) DT(D13):DA(E10) DG(D14):DC(E9) DC(D15):DG(E8) DC(D16):DG(E7) DA(D17):DT(E6) DT(D18):DA(E5) DC(D19):DG(E4) DT(D20):DA(E3) DT(D21):DA(E2) DA(D22):DT(E1) chainO ( 56) TYR128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 58) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 ( 90) ARG162 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 ( 93) GLU165 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 ( 97) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 14 0 0 0 0 0 (126) THR198 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (127) ASN199 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 (130) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 4 0 0 0 0 0 0 (171) PHE243 0 0 0 0 0 0 0 0 0 0 2 36 0 0 0 0 0 0 0 0 0 0 (174) ILE246 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (175) GLN247 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (179) ARG251 0 0 0 0 0 0 0 0 0 0 0 5 6 3 0 0 0 0 0 0 0 0 (208) GLU280 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (211) ASP283 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (212) LEU284 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (213) SER285 0 0 0 0 0 0 0 0 0 0 4 3 3 0 0 0 0 0 0 0 0 0 (216) TYR288 0 0 0 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 0 0 0 0 (247) ASP319 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG350 0 0 0 0 0 15 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ASP353 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER384 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) ARG387 0 0 0 8 13 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence edllknlltmgvdidmarkrqpgvfhrmitneqdlkmfllskgaskeviasiisrYpRaitrtpenlskrwdlwrkivtsdleivnileRspEsffRsnnnlnlennikflysvgltrkclcrllTNapRtfsnsldlnkqmveflqaaglslghndpadfvrkiifknpFilIQstkRvkanieflrstfnlnseellvlicgpgaEilDLSndYarrsyanikeklfslgcteeevqkfvlsypDviflaekkfndkidclmeenisisqiienpRvlDssistlksrikelvnagcnlstlnitllswSkkRyeaklkkls >3mvb_O: title=CRYSTAL STRUCTURE OF A TRIPLE RFY MUTANT OF HUMAN MTERF1 BOUND TO THE TERMINATION SEQUENCE organism=Homo sapiens DNA sequence DA(D1):DT(E22) DT(D2):DA(E21) DT(D3):DA(E20) DA(D4):DT(E19) DC(D5):DG(E18) DC(D6):DG(E17) DG(D7):DC(E16) DG(D8):DC(E15) DG(D9):DC(E14) DC(D10):DG(E13) DT(D11):DA(E12) DC(D12):DG(E11) DT(D13):DA(E10) DG(D14):DC(E9) DC(D15):DG(E8) DC(D16):DG(E7) DA(D17):DT(E6) DT(D18):DA(E5) DC(D19):DG(E4) DT(D20):DA(E3) DT(D21):DA(E2) DA(D22):DT(E1) chainO ( 56) TYR128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 58) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 4 0 0 0 ( 87) ILE159 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 90) ALA162 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 93) GLU165 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 1 0 0 0 0 0 0 ( 97) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 14 0 0 0 0 0 (123) ARG195 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (126) THR198 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (127) ASN199 0 0 0 0 0 0 0 0 0 0 13 6 0 0 0 0 0 0 0 0 0 0 (130) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 4 9 11 3 0 0 0 0 0 0 (168) LYS240 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) PRO242 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (179) ARG251 0 0 0 0 0 0 0 0 0 0 1 5 7 1 0 0 0 0 0 0 0 0 (208) GLU280 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (211) ASP283 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (212) LEU284 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (213) SER285 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 (247) ASP319 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (250) PHE322 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 (278) ARG350 0 0 0 0 0 13 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ASP353 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER384 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) ARG387 0 0 0 8 14 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence edllknlltmgvdidmarkrqpgvfhrmitneqdlkmfllskgaskeviasiisrYpRaitrtpenlskrwdlwrkivtsdleivnIleAspEsffRsnnnlnlennikflysvgltrkclcRllTNapRtfsnsldlnkqmveflqaaglslghndpadfvrkiifKNPailiqstkRvkanieflrstfnlnseellvlicgpgaEilDLSndaarrsyanikeklfslgcteeevqkfvlsypDviFlaekkfndkidclmeenisisqiienpRvlDssistlksrikelvnagcnlstlnitllswSkkRyeaklkkls >3mx4_AH: title=DNA BINDING AND CLEAVAGE BY THE GIY-YIG ENDONUCLEASE R.ECO29KI INACTIVE VARIANT E142Q organism=ESCHERICHIA COLI DNA sequence DC(K1):DG(L22) DG(K2):DC(L21) DG(K3):DC(L20) DG(K4):DC(L19) DA(K5):DT(L18) DG(K6):DC(L17) DG(K7):DC(L16) DC(K8):DG(L15) DC(K9):DG(L14) DC(K10):DG(L13) DG(K11):DC(L12) DC(K12):DG(L11) DG(K13):DC(L10) DG(K14):DC(L9) DG(K15):DC(L8) DC(K16):DG(L7) DC(K17):DG(L6) DG(K18):DC(L5) DC(K19):DG(L4) DC(K20):DG(L3) DG(K21):DC(L2) DC(K22):DG(L1) chainA (103) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 (161) ASN162 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 (162) HIS163 0 0 0 0 0 0 0 0 0 0 0 0 25 12 5 0 0 0 0 0 0 0 (163) THR164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (168) ARG169 0 0 0 0 0 0 0 0 0 0 2 11 28 0 0 0 0 0 0 0 0 0 chainH (161) ASN162 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 (162) HIS163 0 0 0 0 0 0 0 5 14 23 0 0 0 0 0 0 0 0 0 0 0 0 (163) THR164 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG169 0 0 0 0 0 0 0 0 0 25 13 2 0 0 0 0 0 0 0 0 0 0 prot.sequence hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvyalyytghyslydeysrinrkaynlpiyvgkavpagwrqsrisdhetragselsnRirehgrniaktsnldlcdfscrfvifeatgsdmistvqaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsksnft/hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvyalyytghyslydeysrinrkaynlpiyvgkavpagwrqsrisdhetragselsnrirehgrniaktsnldlcdfscrfvifeatgsdmistvqaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsk >3mx4_BE: title=DNA BINDING AND CLEAVAGE BY THE GIY-YIG ENDONUCLEASE R.ECO29KI INACTIVE VARIANT E142Q organism=ESCHERICHIA COLI DNA sequence DC(O1):DG(P22) DG(O2):DC(P21) DG(O3):DC(P20) DG(O4):DC(P19) DA(O5):DT(P18) DG(O6):DC(P17) DG(O7):DC(P16) DC(O8):DG(P15) DC(O9):DG(P14) DC(O10):DG(P13) DG(O11):DC(P12) DC(O12):DG(P11) DG(O13):DC(P10) DG(O14):DC(P9) DG(O15):DC(P8) DC(O16):DG(P7) DC(O17):DG(P6) DG(O18):DC(P5) DC(O19):DG(P4) DC(O20):DG(P3) DG(O21):DC(P2) DC(O22):DG(P1) chainB (102) ASN103 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ARG104 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) ASN162 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 (162) HIS163 0 0 0 0 0 0 0 7 17 24 0 0 0 0 0 0 0 0 0 0 0 0 (163) THR164 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG169 0 0 0 0 0 0 0 0 0 27 13 0 0 0 0 0 0 0 0 0 0 0 chainE (104) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (162) ASN162 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 (163) HIS163 0 0 0 0 0 0 0 0 0 0 0 0 23 12 6 0 0 0 0 0 0 0 (164) THR164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (169) ARG169 0 0 0 0 0 0 0 0 0 0 2 11 24 0 0 0 0 0 0 0 0 0 prot.sequence hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvyalyytghyslydeysrinrkaynlpiyvgkavpagwrqsrisdhetragselsNRirehgrniaktsnldlcdfscrfvifeatgsdmistvqaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsksnft/ghnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvyalyytghyslydeysrinrkaynlpiyvgkavpagwrqsrisdhetragselsnRirehgrniaktsnldlcdfscrfvifeatgsdmistvqaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsks >3mx4_CG: title=DNA BINDING AND CLEAVAGE BY THE GIY-YIG ENDONUCLEASE R.ECO29KI INACTIVE VARIANT E142Q organism=ESCHERICHIA COLI DNA sequence DC(M1):DG(N22) DG(M2):DC(N21) DG(M3):DC(N20) DG(M4):DC(N19) DA(M5):DT(N18) DG(M6):DC(N17) DG(M7):DC(N16) DC(M8):DG(N15) DC(M9):DG(N14) DC(M10):DG(N13) DG(M11):DC(N12) DC(M12):DG(N11) DG(M13):DC(N10) DG(M14):DC(N9) DG(M15):DC(N8) DC(M16):DG(N7) DC(M17):DG(N6) DG(M18):DC(N5) DC(M19):DG(N4) DC(M20):DG(N3) DG(M21):DC(N2) DC(M22):DG(N1) DC(O1):DG(P22) DG(O2):DC(P21) DG(O3):DC(P20) DG(O4):DC(P19) DA(O5):DT(P18) DG(O6):DC(P17) DG(O7):DC(P16) DC(O8):DG(P15) DC(O9):DG(P14) DC(O10):DG(P13) DG(O11):DC(P12) DC(O12):DG(P11) DG(O13):DC(P10) DG(O14):DC(P9) DG(O15):DC(P8) DC(O16):DG(P7) DC(O17):DG(P6) DG(O18):DC(P5) DC(O19):DG(P4) DC(O20):DG(P3) DG(O21):DC(P2) DC(O22):DG(P1) chainC ( 83) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) ASN162 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) HIS163 0 0 0 0 0 0 0 0 0 0 0 0 26 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ARG169 0 0 0 0 0 0 0 0 0 0 2 13 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (161) ASN162 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) HIS163 0 0 0 0 0 0 0 6 15 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) THR164 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG169 0 0 0 0 0 0 0 0 0 25 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvyalyytghyslydeysrinrkaynlpiyvgkavpagwRqsrisdhetragselsnRirehgrniaktsnldlcdfscrfvifeatgsdmistvqaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsks/hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvyalyytghyslydeysrinrkaynlpiyvgkavpagwrqsrisdhetragselsnrirehgrniaktsnldlcdfscrfvifeatgsdmistvqaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfs >3mx4_D: title=DNA BINDING AND CLEAVAGE BY THE GIY-YIG ENDONUCLEASE R.ECO29KI INACTIVE VARIANT E142Q organism=ESCHERICHIA COLI DNA sequence DG(J1):DC(I22) DC(J2):DG(I21) DG(J3):DC(I20) DG(J4):DC(I19) DC(J5):DG(I18) DG(J6):DC(I17) DG(J7):DC(I16) DC(J8):DG(I15) DC(J9):DG(I14) DC(J10):DG(I13) DG(J11):DC(I12) DC(J12):DG(I11) DG(J13):DC(I10) DG(J14):DC(I9) DG(J15):DC(I8) DC(J16):DG(I7) DC(J17):DG(I6) DT(J18):DA(I5) DC(J19):DG(I4) DC(J20):DG(I3) DC(J21):DG(I2) DG(J22):DC(I1) chainD ( 82) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (100) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 (158) ASN162 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 (159) HIS163 0 0 0 0 0 0 0 0 0 0 0 0 26 13 6 0 0 0 0 0 0 0 (160) THR164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (165) ARG169 0 0 0 0 0 0 0 0 0 0 2 13 28 0 0 0 0 0 0 0 0 0 prot.sequence kfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvyalyytghyslydeysrinrkaynlpiyvgkavpagwRqsrisdhetragselsnRirehgrniaktsnldlcdfscrfvifeatgsdmistvqaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsksn >3mx4_DF: title=DNA BINDING AND CLEAVAGE BY THE GIY-YIG ENDONUCLEASE R.ECO29KI INACTIVE VARIANT E142Q organism=ESCHERICHIA COLI DNA sequence DG(J1):DC(I22) DC(J2):DG(I21) DG(J3):DC(I20) DG(J4):DC(I19) DC(J5):DG(I18) DG(J6):DC(I17) DG(J7):DC(I16) DC(J8):DG(I15) DC(J9):DG(I14) DC(J10):DG(I13) DG(J11):DC(I12) DC(J12):DG(I11) DG(J13):DC(I10) DG(J14):DC(I9) DG(J15):DC(I8) DC(J16):DG(I7) DC(J17):DG(I6) DT(J18):DA(I5) DC(J19):DG(I4) DC(J20):DG(I3) DC(J21):DG(I2) DG(J22):DC(I1) chainD ( 82) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (100) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 (158) ASN162 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 (159) HIS163 0 0 0 0 0 0 0 0 0 0 0 0 26 13 6 0 0 0 0 0 0 0 (160) THR164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (165) ARG169 0 0 0 0 0 0 0 0 0 0 2 13 28 0 0 0 0 0 0 0 0 0 chainF (161) ASN162 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (162) HIS163 0 0 0 0 0 0 0 6 14 23 0 0 0 0 0 0 0 0 0 0 0 0 (163) THR164 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG169 0 0 0 0 0 0 0 0 0 27 13 1 0 0 0 0 0 0 0 0 0 0 prot.sequence kfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvyalyytghyslydeysrinrkaynlpiyvgkavpagwRqsrisdhetragselsnRirehgrniaktsnldlcdfscrfvifeatgsdmistvqaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsksn/hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvyalyytghyslydeysrinrkaynlpiyvgkavpagwrqsrisdhetragselsnrirehgrniaktsnldlcdfscrfvifeatgsdmistvqaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsks >3mx9_A:Homing_endonucleases; title=MOLECULAR BASIS OF ENGINEERED MEGANUCLEASE TARGETING OF THE ENDOGENOUS HUMAN RAG1 LOCUS organism=Chlamydomonas reinhardtii DNA sequence DT(D601):DA(C524) DC(D602):DG(C523) DT(D603):DA(C522) DG(D604):DC(C521) DG(D605):DC(C520) DC(D606):DG(C519) DT(D607):DA(C518) DG(D608):DC(C517) DA(D609):DT(C516) DG(D610):DC(C515) DG(D611):DC(C514) DT(D612):DA(C513) DA(D613):DT(C512) DC(D614):DG(C511) DC(D615):DG(C510) DT(D616):DA(C509) DG(D617):DC(C508) DA(D618):DT(C507) DG(D619):DC(C506) DA(D620):DT(C505) DA(D621):DT(C504) DC(D622):DG(C503) DA(D623):DT(C502) DA(D624):DT(C501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG38 0 0 13 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG40 0 0 0 13 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR44 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 14 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLN75 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) SER213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (169) ILE215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 (171) GLN217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 (173) LYS219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 1 0 0 0 0 (175) ARG221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 15 18 0 (177) SER223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 (178) ASN224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (183) GLN229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 (189) ALA235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (191) THR237 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 (213) TYR259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 (215) SER261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (218) VAL264 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (220) ASP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (222) ARG268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 7 0 0 0 0 0 0 (224) SER270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (285) THR331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQinpnqSskfkhRlRltfYvTqktqrrwfldklvdeigvgYvRdsgsVsQyvlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsktrkttsetvrasnkefllylagfvdsdgSiIaQiKpRqSNkfkhQlsltfAvTqktqrrwfldklvdeigvgyvYdSgsVsDyRlSeikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld >3mxa_A:Homing_endonucleases; title=MOLECULAR BASIS OF ENGINEERED MEGANUCLEASE TARGETING OF THE ENDOGENOUS HUMAN RAG1 LOCUS organism=Chlamydomonas reinhardtii DNA sequence DT(C501):DA(F624) DT(C502):DA(F623) DG(C503):DC(F622) DT(C504):DA(F621) DT(C505):DA(F620) DC(C506):DG(F619) DT(C507):DA(F618) DC(C508):DG(F617) DA(C509):DT(F616) DG(C510):DC(F615) DG(C511):DC(E614) DT(C512):DA(E613) DA(C513):DT(E612) DC(C514):DG(E611) DC(D515):DG(E610) DT(D516):DA(E609) DC(D517):DG(E608) DA(D518):DT(E607) DG(D519):DC(E606) DC(D520):DG(E605) DC(D521):DG(E604) DA(D522):DT(E603) DG(D523):DC(E602) DA(D524):DT(E601) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 ( 37) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 14 0 0 ( 39) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 15 0 0 0 ( 43) TYR44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 15 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 ( 74) GLN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 (169) SER213 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ILE215 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLN217 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) LYS219 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG221 0 17 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) SER223 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ASN224 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) GLN229 0 2 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) ALA235 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) THR237 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) TYR259 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER261 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) VAL264 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ASP266 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG268 0 0 0 0 0 0 7 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) SER270 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) LYS330 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) THR331 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQinpnqSskfkhRlRltfYvTqktqrrwfldklvdeigvgYvRdSgsVsQyvlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravlsnkefllylagfvdsdgSiIaQiKpRqSNkfkhQlSltfAvTqktqrrwfldklvdeigvgyvYdSgsVsDyRlSeikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlds >3mxb_AB:Homing_endonucleases; title=MOLECULAR BASIS OF ENGINEERED MEGANUCLEASE TARGETING OF THE ENDOGENOUS HUMAN RAG1 LOCUS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(C501):DA(E624) DT(C502):DA(E623) DG(C503):DC(E622) DT(C504):DA(E621) DT(C505):DA(E620) DC(C506):DG(E619) DT(C507):DA(E618) DC(C508):DG(E617) DA(C509):DT(E616) DG(C510):DC(E615) DG(C511):DC(E614) DT(C512):DA(E613) DA(C513):DT(E612) DC(C514):DG(E611) DC(C515):DG(E610) DT(C516):DA(E609) DC(C517):DG(E608) DA(C518):DT(E607) DG(C519):DC(E606) DC(C520):DG(E605) DC(C521):DG(E604) DA(C522):DT(E603) DG(C523):DC(E602) DA(C524):DT(E601) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 ( 27) ASN28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 ( 37) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 16 0 0 ( 39) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 14 0 0 0 ( 43) TYR44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 1 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 21 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 ( 74) GLN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG30 0 21 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN33 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER40 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ALA44 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP75 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG77 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) SER79 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkkfllylagfvdgdgSiIaQiNpNqSskfkhRlRltfYvTqktqrrwfldklvdeigvgYvRdsgsVsQyvlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlds/ntkyneefllylagfvdsdgSiIaQiKpRqSNkfkhQlSltfAvTqktqrrwfldklvdeigvgyvYdSgsVsDyRlSeikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlds >3mxb_B:Homing_endonucleases; title=MOLECULAR BASIS OF ENGINEERED MEGANUCLEASE TARGETING OF THE ENDOGENOUS HUMAN RAG1 LOCUS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(E601):DA(C524) DC(E602):DG(C523) DT(E603):DA(C522) DG(E604):DC(C521) DG(E605):DC(C520) DC(E606):DG(C519) DT(E607):DA(C518) DG(E608):DC(C517) DA(E609):DT(C516) DG(E610):DC(C515) DG(E611):DC(C514) DT(E612):DA(C513) DA(E613):DT(C512) DC(E614):DG(C511) DC(E615):DG(C510) DT(E616):DA(C509) DG(E617):DC(C508) DA(E618):DT(C507) DG(E619):DC(C506) DA(E620):DT(C505) DA(E621):DT(C504) DC(E622):DG(C503) DA(E623):DT(C502) DA(E624):DT(C501) chainB ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 ( 29) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 21 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 ( 32) ASN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 1 0 ( 39) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 43) ALA44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 ( 74) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 76) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 5 0 0 0 0 0 0 ( 78) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence ntkyneefllylagfvdsdgSiIaQiKpRqSNkfkhQlSltfAvTqktqrrwfldklvdeigvgyvYdSgsVsDyRlSeikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlds >3mxb_RS:Homing_endonucleases; title=MOLECULAR BASIS OF ENGINEERED MEGANUCLEASE TARGETING OF THE ENDOGENOUS HUMAN RAG1 LOCUS organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(T501):DA(V624) DT(T502):DA(V623) DG(T503):DC(V622) DT(T504):DA(V621) DT(T505):DA(V620) DC(T506):DG(V619) DT(T507):DA(V618) DC(T508):DG(V617) DA(T509):DT(V616) DG(T510):DC(V615) DG(T511):DC(V614) DT(T512):DA(V613) DA(T513):DT(V612) DC(T514):DG(V611) DC(T515):DG(V610) DT(T516):DA(V609) DC(T517):DG(V608) DA(T518):DT(V607) DG(T519):DC(V606) DC(T520):DG(V605) DC(T521):DG(V604) DA(T522):DT(V603) DG(T523):DC(V602) DA(T524):DT(V601) chainR ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 ( 27) ASN28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 ( 37) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 15 20 0 0 ( 39) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 18 9 0 0 0 ( 43) TYR44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 2 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 16 26 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 ( 74) GLN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 chainS ( 21) SER22 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG30 0 21 15 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN33 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER40 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ALA44 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP75 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG77 0 0 0 0 0 3 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) SER79 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkkfllylagfvdgdgSiIaQiNpNqSskfkhRlRltfYvTqktqrrwfldklvdeigvgYvRdsgsVsQyvlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravldsl/ntkyneefllylagfvdsdgSiIaQiKpRqSNkfkhQlSltfAvTqktqrrwfldklvdeigvgyvYdsgsVsDyRlSeikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld >3mzh_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF CAMP RECEPTOR PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH CAMP AND ITS DNA BINDING ELEMENT organism=Mycobacterium tuberculosis DNA sequence DA(C4):DC(D22) DA(C5):DT(D21) DT(C6):DA(D20) DG(C7):DC(D19) DT(C8):DA(D18) DG(C9):DC(D17) DA(C10):DT(D16) DT(C11):DA(D15) DC(C12):DG(D14) DT(C13):DA(D13) DA(C14):DT(D12) DG(C15):DC(D11) DG(C16):DC(D10) DT(C17):DA(D9) DC(C18):DG(D8) DA(C19):DT(D7) DC(C20):DG(D6) DG(C21):DC(D5) DT(C22):DA(D4) chainA (188) SER187 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (189) ARG188 0 0 19 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) GLU189 0 0 0 0 3 6 4 0 0 0 0 0 0 0 0 0 0 0 0 (191) THR190 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 (193) ASN192 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) LYS193 0 0 0 0 6 5 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmdeilaragifqgvepsaiaaltkqlqpvdfprghtvfaegepgdrlyiiisgkvkigrrapdgrenlltimgpsdmfgelsifdpgprtssattitevravsmdrdalrswiadrpeiseqllrvlarrlrrtnnnladliftdvpgrvakqllqlaqrfgtqeggalrvthdltqeeiaqlvgaSRETvNKaladfahrgwirlegksvlisdserlarrar >3mzh_AB:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF CAMP RECEPTOR PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH CAMP AND ITS DNA BINDING ELEMENT organism=Mycobacterium tuberculosis DNA sequence DA(C4):DC(D22) DA(C5):DT(D21) DT(C6):DA(D20) DG(C7):DC(D19) DT(C8):DA(D18) DG(C9):DC(D17) DA(C10):DT(D16) DT(C11):DA(D15) DC(C12):DG(D14) DT(C13):DA(D13) DA(C14):DT(D12) DG(C15):DC(D11) DG(C16):DC(D10) DT(C17):DA(D9) DC(C18):DG(D8) DA(C19):DT(D7) DC(C20):DG(D6) DG(C21):DC(D5) DT(C22):DA(D4) chainA (188) SER187 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (189) ARG188 0 0 19 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) GLU189 0 0 0 0 3 6 4 0 0 0 0 0 0 0 0 0 0 0 0 (191) THR190 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 (193) ASN192 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) LYS193 0 0 0 0 6 5 2 0 0 0 0 0 0 0 0 0 0 0 0 chainB (188) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (189) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 5 0 (190) GLU189 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 7 0 0 0 (191) THR190 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 (193) ASN192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 (194) LYS193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 prot.sequence hmdeilaragifqgvepsaiaaltkqlqpvdfprghtvfaegepgdrlyiiisgkvkigrrapdgrenlltimgpsdmfgelsifdpgprtssattitevravsmdrdalrswiadrpeiseqllrvlarrlrrtnnnladliftdvpgrvakqllqlaqrfgtqeggalrvthdltqeeiaqlvgaSRETvNKaladfahrgwirlegksvlisdserlarrar/hmdeilaragifqgvepsaiaaltkqlqpvdfprghtvfaegepgdrlyiiisgkvkigrrapdgrenlltimgpsdmfgelsifdpgprtssattitevravsmdrdalrswiadrpeiseqllrvlarrlrrtnnnladliftdvpgrvakqllqlaqrfgtqeggalrvthdltqeeiaqlvgaSRETvNKaladfahrgwirlegksvlisdserlarrar >3n4m_ABC:C-terminal_domain_of_RNA_polymerase_alpha_subunit;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=E. COLI RNA POLYMERASE ALPHA SUBUNIT C-TERMINAL DOMAIN IN COMPLEX WITH CAP AND DNA organism=ESCHERICHIA COLI DNA sequence DA(E25):DT(D20) DT(E26):DA(D19) DC(E27):DG(D18) DA(E28):DT(D17) DC(E29):DG(D16) DA(E30):DT(D15) DT(E31):DA(D14) DT(E32):DA(D13) DT(E33):DA(D12) DT(E34):DA(D11) DA(E35):DT(D10) DG(E36):DC(D9) DG(E37):DC(D8) DA(E38):DT(D7) DA(E39):DT(D6) DA(E40):DT(D5) DA(E41):DT(D4) DA(E42):DT(D3) DA(E43):DT(D2) DG(E44):DC(D1) chainA (164) GLN170 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) SER179 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG180 0 0 0 2 12 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) GLU181 0 6 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ARG185 0 7 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 17) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 chainC ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence tdptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcSREtvgRilkmledqnlisahgktivvygtr/fdpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >3n4m_B:C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=E. COLI RNA POLYMERASE ALPHA SUBUNIT C-TERMINAL DOMAIN IN COMPLEX WITH CAP AND DNA organism=ESCHERICHIA COLI DNA sequence DA(E25):DT(D20) DT(E26):DA(D19) DC(E27):DG(D18) DA(E28):DT(D17) DC(E29):DG(D16) DA(E30):DT(D15) DT(E31):DA(D14) DT(E32):DA(D13) DT(E33):DA(D12) DT(E34):DA(D11) DA(E35):DT(D10) DG(E36):DC(D9) DG(E37):DC(D8) DA(E38):DT(D7) DA(E39):DT(D6) DA(E40):DT(D5) DA(E41):DT(D4) DA(E42):DT(D3) DA(E43):DT(D2) DG(E44):DC(D1) chainB ( 17) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 prot.sequence fdpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >3n6s_A: title=CRYSTAL STRUCTURE OF HUMAN MITOCHONDRIAL MTERF IN COMPLEX WITH A 15- MER DNA ENCOMPASSING THE TRNALEU(UUR) BINDING SEQUENCE organism=Homo sapiens DNA sequence DT(B2):DA(C15) DG(B3):DC(C14) DG(B4):DC(C13) DC(B5):DG(C12) DA(B6):DT(C11) DG(B7):DC(C10) DA(B8):DT(C9) DG(B9):DC(C8) DC(B10):DG(C7) DC(B11):DG(C6) DC(B12):DG(C5) DG(B13):DC(C4) DG(B14):DC(C3) DT(B15):DA(C2) chainA (293) ARG350 0 0 0 0 0 0 0 0 0 0 12 4 0 0 (296) ASP353 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (327) SER384 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (330) ARG387 0 0 0 0 0 0 0 0 9 14 15 0 0 0 prot.sequence fgvkchntdseplknedllknlltmgvdidmarkrqpgvfhrmitneqdlkmfllskgaskeviasiisrypraitrtpenlskrwdlwrkivtsdleivnilerspesffrsnnnlnlennikflysvgltrkclcrlltnaprtfsnsldlnkqmveflqaaglslghndpadfvrkiifknpfiliqstkrvkanieflrstfnlnseellvlicgpgaeildlsndyarrsyanikeklfslgcteeevqkfvlsypdviflaekkfndkidclmeenisisqiienpRvlDssistlksrikelvnagcnlstlnitllswSkkRyeaklkklsrfahh >3n78_A:Restriction_endonuclease-like; title=SGRAI BOUND TO SECONDARY SITE DNA AND MG(II) organism=Streptomyces griseus DNA sequence DA(C2):DT(D17) DG(C3):DC(D16) DT(C4):DA(D15) DC(C5):DG(D14) DC(C6):DG(D13) DA(C7):DT(D12) DC(C8):DG(D11) DC(C9):DG(D10) DG(C10):DC(D9) DG(C11):DC(D8) DG(C12):DC(D7) DG(C13):DC(D6) DG(C14):DC(D5) DA(C15):DT(D4) DC(C16):DG(D3) DT(C17):DA(D2) chainA ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 7 13 2 0 0 0 ( 35) GLN36 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 10 11 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 4 6 9 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 1 6 13 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 11 16 19 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 3 6 6 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 17 5 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakaKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglarsavhrairelyvpptaadlarrffaflnermelvng >3n78_AB:Restriction_endonuclease-like; title=SGRAI BOUND TO SECONDARY SITE DNA AND MG(II) organism=Streptomyces griseus DNA sequence DA(D2):DT(C17) DG(D3):DC(C16) DT(D4):DA(C15) DC(D5):DG(C14) DC(D6):DG(C13) DC(D7):DG(C12) DC(D8):DG(C11) DC(D9):DG(C10) DG(D10):DC(C9) DG(D11):DC(C8) DT(D12):DA(C7) DG(D13):DC(C6) DG(D14):DC(C5) DA(D15):DT(C4) DC(D16):DG(C3) DT(D17):DA(C2) chainA ( 30) ARG31 0 0 0 2 13 7 0 0 0 0 0 0 0 0 0 0 ( 35) GLN36 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 11 10 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 9 6 4 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 13 6 1 0 0 0 0 0 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 19 16 11 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 6 6 3 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 5 17 0 0 0 0 0 0 0 chainB ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 16 10 1 0 0 0 ( 35) GLN36 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 2 10 12 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 6 4 11 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 (241) SER244 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (243) ARG246 0 0 0 0 0 9 17 18 0 0 0 0 0 0 0 0 (244) SER247 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (245) ASP248 0 0 0 0 0 5 6 5 0 0 0 0 0 0 0 0 (246) ARG249 0 0 0 0 0 0 0 17 10 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakaKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglarsavhrairelyvpptaadlarrffaflnermelvng/pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakaKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegvhrairelyvpptaadlarrffaflnermelvng >3n7b_A:Restriction_endonuclease-like; title=SGRAI BOUND TO SECONDARY SITE DNA AND CA(II) organism=Streptomyces griseus DNA sequence DA(C2):DT(D17) DG(C3):DC(D16) DT(C4):DA(D15) DC(C5):DG(D14) DC(C6):DG(D13) DA(C7):DT(D12) DC(C8):DG(D11) DC(C9):DG(D10) DG(C10):DC(D9) DG(C11):DC(D8) DG(C12):DC(D7) DG(C13):DC(D6) DG(C14):DC(D5) DA(C15):DT(D4) DC(C16):DG(D3) DT(C17):DA(D2) chainA ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 10 12 2 0 0 0 ( 35) GLN36 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 1 10 11 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 5 6 11 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 1 8 9 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 9 17 17 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 2 9 5 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 16 8 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglarsavhrairelyvpptaadlarrffaflnermelvng >3n7b_AB:Restriction_endonuclease-like; title=SGRAI BOUND TO SECONDARY SITE DNA AND CA(II) organism=Streptomyces griseus DNA sequence DA(C2):DT(D17) DG(C3):DC(D16) DT(C4):DA(D15) DC(C5):DG(D14) DC(C6):DG(D13) DA(C7):DT(D12) DC(C8):DG(D11) DC(C9):DG(D10) DG(C10):DC(D9) DG(C11):DC(D8) DG(C12):DC(D7) DG(C13):DC(D6) DG(C14):DC(D5) DA(C15):DT(D4) DC(C16):DG(D3) DT(C17):DA(D2) chainA ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 10 12 2 0 0 0 ( 35) GLN36 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 1 10 11 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 5 6 11 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 1 8 9 0 0 0 0 (243) SER244 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 9 17 17 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 2 9 5 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 16 8 0 0 0 0 0 0 0 chainB ( 30) ARG31 0 0 0 2 12 17 0 0 0 0 0 0 0 0 0 0 ( 35) GLN36 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 10 11 2 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 9 3 5 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 (241) SER244 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (243) ARG246 0 0 0 0 0 0 0 0 15 17 7 0 0 0 0 0 (244) SER247 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (245) ASP248 0 0 0 0 0 0 0 0 5 12 3 0 0 0 0 0 (246) ARG249 0 0 0 0 0 0 0 8 17 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglarsavhrairelyvpptaadlarrffaflnermelvng/pftysieatrnlatterciqdirnapvrnRstqfQlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrSlRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegvhrairelyvpptaadlarrffaflnermelvng >3n7q_A: title=CRYSTAL STRUCTURE OF HUMAN MITOCHONDRIAL MTERF FRAGMENT (AA 99-399) IN COMPLEX WITH A 12-MER DNA ENCOMPASSING THE TRNALEU(UUR) BINDING SEQUENCE organism=Homo sapiens DNA sequence DG(B1):DC(C12) DG(B2):DC(C11) DC(B3):DG(C10) DA(B4):DT(C9) DG(B5):DC(C8) DA(B6):DT(C7) DG(B7):DC(C6) DC(B8):DG(C5) DC(B9):DG(C4) DC(B10):DG(C3) DG(B11):DC(C2) DG(B12):DC(C1) chainA (251) ARG350 0 0 0 4 0 0 0 0 0 0 0 0 (284) TRP383 0 0 0 0 0 4 0 0 0 0 0 0 (285) SER384 0 0 1 2 0 0 0 0 0 0 0 0 (288) ARG387 0 0 0 18 10 6 0 0 0 0 0 0 prot.sequence mitneqdlkmfllskgaskeviasiisrypraitrtpenlskrwdlwrkivtsdleivnilerspesffrsnnnlnlennikflysvgltrkclcrlltnaprtfsnsldlnkqmveflqaaglslghndpadfvrkiifknpfiliqstkrvkanieflrstfnlnseellvlicgpgaeildlsndyarrsyanikeklfslgcteeevqkfvlsypdviflaekkfndkidclmeenisisqiienpRvldssistlksrikelvnagcnlstlnitllsWSkkRyeaklkklsr >3n97_A:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=RNA POLYMERASE ALPHA C-TERMINAL DOMAIN (E. COLI) AND SIGMA REGION 4 (T. AQ. MUTANT) BOUND TO (UP,-35 ELEMENT) DNA organism=THERMUS AQUATICUS DNA sequence DG(M2):DC(N21) DG(M3):DC(N20) DA(M4):DT(N19) DA(M5):DT(N18) DA(M6):DT(N17) DA(M7):DT(N16) DA(M8):DT(N15) DA(M9):DT(N14) DG(M10):DC(N13) DT(M11):DA(N12) DA(M12):DT(N11) DC(M13):DG(N10) DT(M14):DA(N9) DT(M15):DA(N8) DG(M16):DC(N7) DA(M17):DT(N6) DC(M18):DG(N5) DA(M19):DT(N4) DT(M20):DA(N3) DG(M21):DC(N2) DG(M22):DC(N1) chainA ( 25) LEU398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 26) GLU399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 35) THR408 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 36) ARG409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 2 2 0 0 0 ( 37) GLU410 0 0 0 0 0 0 0 0 0 0 0 0 6 13 11 13 0 0 0 0 0 ( 38) ARG411 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 ( 40) ARG413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 ( 41) GLN414 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 prot.sequence sklsereamvlkmrkglidgrehtLEevgayfgvTRERiRQienkalrklrhp >3n97_ABC:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=RNA POLYMERASE ALPHA C-TERMINAL DOMAIN (E. COLI) AND SIGMA REGION 4 (T. AQ. MUTANT) BOUND TO (UP,-35 ELEMENT) DNA organism=ESCHERICHIA COLI / THERMUS AQUATICUS DNA sequence DC(N1):DG(M22) DC(N2):DG(M21) DA(N3):DT(M20) DT(N4):DA(M19) DG(N5):DC(M18) DT(N6):DA(M17) DC(N7):DG(M16) DA(N8):DT(M15) DA(N9):DT(M14) DG(N10):DC(M13) DT(N11):DA(M12) DA(N12):DT(M11) DC(N13):DG(M10) DT(N14):DA(M9) DT(N15):DA(M8) DT(N16):DA(M7) DT(N17):DA(M6) DT(N18):DA(M5) DT(N19):DA(M4) DC(N20):DG(M3) DC(N21):DG(M2) chainA ( 25) LEU398 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) GLU399 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR408 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG409 0 0 0 2 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLU410 0 0 0 0 0 13 11 13 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG411 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG413 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN414 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 chainB ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 chainC ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 prot.sequence sklsereamvlkmrkglidgrehtLEevgayfgvTRERiRQienkalrklrhp/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwppa/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwpp >3nae_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DATP OPPOSITE GUANIDINOHYDANTOIN organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 6 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvapldyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3nbn_AD:DNA-binding_protein_LAG-1_CSL;p53-like_transcription_factors;E_set_domains; title=CRYSTAL STRUCTURE OF A DIMER OF NOTCH TRANSCRIPTION COMPLEX TRIMERS ON HES1 DNA organism=HOMO SAPIENS DNA sequence DA(X2):DT(Y37) DC(X3):DG(Y36) DT(X4):DA(Y35) DG(X5):DC(Y34) DT(X6):DA(Y33) DG(X7):DC(Y32) DG(X8):DC(Y31) DG(X9):DC(Y30) DA(X10):DT(Y29) DA(X11):DT(Y28) DA(X12):DT(Y27) DG(X13):DC(Y26) DA(X14):DT(Y25) DA(X16):DT(Y24) DG(X17):DC(Y22) DT(X18):DA(Y21) DT(X19):DA(Y20) DT(X20):DA(Y19) DG(X21):DC(Y18) DG(X22):DC(Y17) DA(X23):DC(Y16) DA(X24):DT(Y15) DA(X25):DT(Y14) DA(X26):DC(Y13) DT(X27):DA(Y12) DT(X28):DA(Y11) DT(X29):DA(Y10) DC(X30):DG(Y9) DA(X31):DT(Y8) DC(X32):DG(Y7) DA(X33):DT(Y6) DC(X34):DG(Y5) DG(X35):DC(Y4) DA(X36):DT(Y3) DG(X37):DC(Y2) chainA ( 35) TYR46 0 0 0 0 0 0 0 3 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU49 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG51 0 0 0 0 16 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) SER151 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) LYS152 0 0 0 0 0 0 6 11 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LYS156 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) SER181 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) GLN182 0 7 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 35) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 2 0 0 0 0 0 0 0 ( 38) GLU49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 40) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 (140) SER151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 (141) LYS152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 1 0 0 0 0 0 0 (145) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (170) SER181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (171) GLN182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 prot.sequence pppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskKkqslknadlciasgtkvalfnrlrSQtvstrylhveggnfhassqqwgaffihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkepnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlngggdvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgiiystsltftytpep/pppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskKkqslknadlciasgtkvalfnrlrSQtvstrylhveggnfhassqqwgaffihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkepnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlngggdvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgiiystsltftytpep >3nbn_D:p53-like_transcription_factors;DNA-binding_protein_LAG-1_CSL;E_set_domains; title=CRYSTAL STRUCTURE OF A DIMER OF NOTCH TRANSCRIPTION COMPLEX TRIMERS ON HES1 DNA organism=HOMO SAPIENS DNA sequence DC(Y2):DG(X37) DT(Y3):DA(X36) DC(Y4):DG(X35) DG(Y5):DC(X34) DT(Y6):DA(X33) DG(Y7):DC(X32) DT(Y8):DA(X31) DG(Y9):DC(X30) DA(Y10):DT(X29) DA(Y11):DT(X28) DA(Y12):DT(X27) DC(Y13):DA(X26) DT(Y14):DA(X25) DT(Y15):DA(X24) DC(Y16):DA(X23) DC(Y17):DG(X22) DC(Y18):DG(X21) DA(Y19):DT(X20) DA(Y20):DT(X19) DA(Y21):DT(X18) DC(Y22):DG(X17) DT(Y24):DA(X16) DT(Y25):DA(X14) DC(Y26):DG(X13) DT(Y27):DA(X12) DT(Y28):DA(X11) DT(Y29):DA(X10) DC(Y30):DG(X9) DC(Y31):DG(X8) DC(Y32):DG(X7) DA(Y33):DT(X6) DC(Y34):DG(X5) DA(Y35):DT(X4) DG(Y36):DC(X3) DT(Y37):DA(X2) chainD ( 35) TYR46 0 0 0 0 0 0 0 2 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU49 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG51 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) SER151 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) LYS152 0 0 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LYS156 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) SER181 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) GLN182 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskKkqslknadlciasgtkvalfnrlrSQtvstrylhveggnfhassqqwgaffihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkepnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlngggdvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgiiystsltftytpep >3nci_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP OPPOSITE DG AT 1.8 ANGSTROM RESOLUTION organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 7 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3ndh_AB:TTHA0583/YokD-like; title=RESTRICTION ENDONUCLEASE IN COMPLEX WITH SUBSTRATE DNA organism=Thermoplasma acidophilum DNA sequence DG(C2):DC(D11) DT(C3):DA(D10) DA(C4):DT(D9) DC(C5):DG(D8) DG(C6):DC(D7) DC(C7):DG(D6) DG(C8):DC(D5) DA(C9):DT(D4) DT(C10):DA(D3) DG(C11):DC(D2) chainA ( 45) MET47 0 0 0 0 0 22 23 0 0 0 ( 46) GLU48 0 0 0 0 0 6 0 0 0 0 ( 75) THR77 0 0 0 6 0 0 0 0 0 0 (102) LYS104 0 0 0 0 0 0 9 0 0 0 (105) TRP107 0 0 0 0 6 24 4 0 0 0 (166) THR168 0 0 0 0 0 0 0 1 0 0 (167) ASN169 0 0 0 0 0 0 6 0 0 0 (169) ARG171 0 0 0 0 0 13 23 0 0 0 chainB ( 39) MET47 0 0 0 48 23 0 0 0 0 0 ( 40) GLU48 0 0 0 0 6 0 0 0 0 0 ( 69) THR77 0 0 0 0 0 0 3 0 0 0 ( 87) ILE95 0 0 1 0 0 0 0 0 0 0 ( 96) LYS104 0 0 0 18 0 0 0 0 0 0 ( 99) TRP107 0 0 0 6 22 5 0 0 0 0 (161) ASN169 0 0 0 12 0 0 0 0 0 0 (163) ARG171 0 0 0 50 14 0 0 0 0 0 prot.sequence hhhhefdhlkdlfrdrliidkvqrrlpymfqlaelessragkvgMEvgSlreriisslliykfgeknvetdlpiTepeidvklfgspisiktitgkepagvKliWtvdatkarqfletwhprfdlilvhinwsslggvyyipdyvqqrifdeigkdkyiklpkqgTNpRgveisnealkeimtdeetmsikiewkktnvqynafkrwvdlwseg/dhlkdlfrdrliidkvqrrlpymfqlaelessragkvgMEvgSlreriisslliykfgeknvetdlpiTepeidvklfgspisiktItgkepagvKliWtvdatkarqfletwhprfdlilvhinwsslggvyyipdyvqqrifdeigkdkyiklpkqgtNpRgveisnealkeimtdeetmsikiewkktnvqynafkrwvdlwseg >3ndh_B:TTHA0583/YokD-like; title=RESTRICTION ENDONUCLEASE IN COMPLEX WITH SUBSTRATE DNA organism=Thermoplasma acidophilum DNA sequence DG(C2):DC(D11) DT(C3):DA(D10) DA(C4):DT(D9) DC(C5):DG(D8) DG(C6):DC(D7) DC(C7):DG(D6) DG(C8):DC(D5) DA(C9):DT(D4) DT(C10):DA(D3) DG(C11):DC(D2) chainB ( 39) MET47 0 0 0 48 23 0 0 0 0 0 ( 40) GLU48 0 0 0 0 6 0 0 0 0 0 ( 69) THR77 0 0 0 0 0 0 3 0 0 0 ( 87) ILE95 0 0 1 0 0 0 0 0 0 0 ( 96) LYS104 0 0 0 18 0 0 0 0 0 0 ( 99) TRP107 0 0 0 6 22 5 0 0 0 0 (161) ASN169 0 0 0 12 0 0 0 0 0 0 (163) ARG171 0 0 0 50 14 0 0 0 0 0 prot.sequence dhlkdlfrdrliidkvqrrlpymfqlaelessragkvgMEvgSlreriisslliykfgeknvetdlpiTepeidvklfgspisiktItgkepagvKliWtvdatkarqfletwhprfdlilvhinwsslggvyyipdyvqqrifdeigkdkyiklpkqgtNpRgveisnealkeimtdeetmsikiewkktnvqynafkrwvdlwseg >3ndk_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE DG organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 (800) LYS800 0 0 0 0 1 1 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3ne6_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (S565G/Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE DG organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3ngd_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURAL BASIS FOR PROFICIENT INCORPORATION OF DTTP OPPOSITE O6- METHYLGUANINE BY HUMAN DNA POLYMERASE IOTA organism=HOMO SAPIENS DNA sequence DA(C7):DT(D847) DG(C8):DC(D846) DG(C9):DC(D845) DA(C10):DT(D844) DC(C11):DG(D843) DC(C12):DG(D842) chainA (280) GLU305 0 0 0 0 0 2 (332) GLN361 2 0 0 0 0 0 prot.sequence ssrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirryssgresrQcpipshviqkdvmtpmvdilmklfrnmtllsvcfcnlk >3ngi_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DTTP OPPOSITE DG organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DOC(P115):DG(T5) TTP(A904):DG(T4) chainA (361) PRO361 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (411) ASP411 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (413) THR413 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (414) SER414 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (415) LEU415 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (482) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (486) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (560) LYS560 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (561) LEU561 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (564) ASN564 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (565) SER565 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (567) ALA567 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (623) ASP623 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 6 0 0 (800) LYS800 0 0 0 0 3 3 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkLlinSlAgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3nhg_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (S565G/Y567A) TERNARY COMPLEX WITH DTTP OPPOSITE DG organism=Enterobacteria phage RB69 DNA sequence DG(T4):TTP(A904) DG(T5):DOC(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (361) PRO361 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ASP411 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) THR413 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) SER414 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) LEU415 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) ARG482 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) LYS486 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (560) LYS560 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (561) LEU561 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (564) ASN564 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (567) ALA567 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (623) ASP623 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 0 6 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkLliNglAgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3nic_AH: title=DNA BINDING AND CLEAVAGE BY THE GIY-YIG ENDONUCLEASE R.ECO29KI INACTIVE VARIANT Y49F organism=ESCHERICHIA COLI DNA sequence DC(M1):DG(N22) DG(M2):DC(N21) DG(M3):DC(N20) DG(M4):DC(N19) DA(M5):DT(N18) DG(M6):DC(N17) DG(M7):DC(N16) DC(M8):DG(N15) DC(M9):DG(N14) DC(M10):DG(N13) DG(M11):DC(N12) DC(M12):DG(N11) DG(M13):DC(N10) DG(M14):DC(N9) DG(M15):DC(N8) DC(M16):DG(N7) DC(M17):DG(N6) DG(M18):DC(N5) DC(M19):DG(N4) DC(M20):DG(N3) DG(M21):DC(N2) DC(M22):DG(N1) chainA (161) ASN162 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (162) HIS163 0 0 0 0 0 0 0 7 13 20 0 0 0 0 0 0 0 0 0 0 0 0 (163) THR164 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG169 0 0 0 0 0 0 0 0 0 26 14 0 0 0 0 0 0 0 0 0 0 0 chainH ( 85) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (103) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (161) ASN162 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 (162) HIS163 0 0 0 0 0 0 0 0 0 0 0 0 32 13 4 0 0 0 0 0 0 0 (163) THR164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (168) ARG169 0 0 0 0 0 0 0 0 0 0 3 12 24 0 0 0 0 0 0 0 0 0 prot.sequence hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvfalyytghyslydeysrinrkaynlpiyvgkavpagwrqsrisdhetragselsnrirehgrniaktsnldlcdfscrfvifeatgsdmistveaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsks/hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvfalyytghyslydeysrinrkaynlpiyvgkavpagwRqsrisdhetragselsnRirehgrniaktsnldlcdfscrfvifeatgsdmistveaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsk >3nic_BD: title=DNA BINDING AND CLEAVAGE BY THE GIY-YIG ENDONUCLEASE R.ECO29KI INACTIVE VARIANT Y49F organism=ESCHERICHIA COLI DNA sequence DC(I1):DG(J22) DG(I2):DC(J21) DG(I3):DC(J20) DG(I4):DC(J19) DA(I5):DT(J18) DG(I6):DC(J17) DG(I7):DC(J16) DC(I8):DG(J15) DC(I9):DG(J14) DC(I10):DG(J13) DG(I11):DC(J12) DC(I12):DG(J11) DG(I13):DC(J10) DG(I14):DC(J9) DG(I15):DC(J8) DC(I16):DG(J7) DC(I17):DG(J6) DG(I18):DC(J5) DC(I19):DG(J4) DC(I20):DG(J3) DG(I21):DC(J2) DC(I22):DG(J1) DC(K1):DG(L22) DG(K2):DC(L21) DG(K3):DC(L20) DG(K4):DC(L19) DA(K5):DT(L18) DG(K6):DC(L17) DG(K7):DC(L16) DC(K8):DG(L15) DC(K9):DG(L14) DC(K10):DG(L13) DG(K11):DC(L12) DC(K12):DG(L11) DG(K13):DC(L10) DG(K14):DC(L9) DG(K15):DC(L8) DC(K16):DG(L7) DC(K17):DG(L6) DG(K18):DC(L5) DC(K19):DG(L4) DC(K20):DG(L3) DG(K21):DC(L2) DC(K22):DG(L1) chainB (161) ASN162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (162) HIS163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 19 0 0 0 0 0 0 0 0 0 0 0 0 (163) THR164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 13 1 0 0 0 0 0 0 0 0 0 0 chainD ( 85) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 (103) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (161) ASN162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 (162) HIS163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 16 4 0 0 0 0 0 0 0 (163) THR164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (168) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 21 0 0 0 0 0 0 0 0 0 prot.sequence hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvfalyytghyslydeysrinrkaynlpiyvgkavpagwrqsrisdhetragselsnrirehgrniaktsnldlcdfscrfvifeatgsdmistveaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsks/hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvfalyytghyslydeysrinrkaynlpiyvgkavpagwRqsrisdhetragselsnRirehgrniaktsnldlcdfscrfvifeatgsdmistveaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsk >3nic_CG: title=DNA BINDING AND CLEAVAGE BY THE GIY-YIG ENDONUCLEASE R.ECO29KI INACTIVE VARIANT Y49F organism=ESCHERICHIA COLI DNA sequence DC(I1):DG(J22) DG(I2):DC(J21) DG(I3):DC(J20) DG(I4):DC(J19) DA(I5):DT(J18) DG(I6):DC(J17) DG(I7):DC(J16) DC(I8):DG(J15) DC(I9):DG(J14) DC(I10):DG(J13) DG(I11):DC(J12) DC(I12):DG(J11) DG(I13):DC(J10) DG(I14):DC(J9) DG(I15):DC(J8) DC(I16):DG(J7) DC(I17):DG(J6) DG(I18):DC(J5) DC(I19):DG(J4) DC(I20):DG(J3) DG(I21):DC(J2) DC(I22):DG(J1) chainC (103) ARG104 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) ASN162 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 (162) HIS163 0 0 0 0 0 0 0 7 15 25 0 0 0 0 0 0 0 0 0 0 0 0 (163) THR164 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG169 0 0 0 0 0 0 0 0 0 25 13 1 0 0 0 0 0 0 0 0 0 0 chainG (161) ASN162 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 (162) HIS163 0 0 0 0 0 0 0 0 0 0 0 0 23 14 3 0 0 0 0 0 0 0 (163) THR164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (168) ARG169 0 0 0 0 0 0 0 0 0 0 2 13 26 0 0 0 0 0 0 0 0 0 prot.sequence hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvfalyytghyslydeysrinrkaynlpiyvgkavpagwrqsrisdhetragselsnRirehgrniaktsnldlcdfscrfvifeatgsdmistveaalikiykplwntvvdgfgNHTpgagRfaQaksdwdvihpgrewaekctgvhsepyfieerikqyfsk/hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvfalyytghyslydeysrinrkaynlpiyvgkavpagwrqsrisdhetragselsnrirehgrniaktsnldlcdfscrfvifeatgsdmistveaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsk >3nic_EF: title=DNA BINDING AND CLEAVAGE BY THE GIY-YIG ENDONUCLEASE R.ECO29KI INACTIVE VARIANT Y49F organism=ESCHERICHIA COLI DNA sequence DG(P1):DC(O22) DC(P2):DG(O21) DG(P3):DC(O20) DG(P4):DC(O19) DC(P5):DG(O18) DG(P6):DC(O17) DG(P7):DC(O16) DC(P8):DG(O15) DC(P9):DG(O14) DC(P10):DG(O13) DG(P11):DC(O12) DC(P12):DG(O11) DG(P13):DC(O10) DG(P14):DC(O9) DG(P15):DC(O8) DC(P16):DG(O7) DC(P17):DG(O6) DT(P18):DA(O5) DC(P19):DG(O4) DC(P20):DG(O3) DC(P21):DG(O2) chainE (162) ASN162 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (163) HIS163 0 0 0 0 0 0 0 7 15 22 0 0 0 0 0 0 0 0 0 0 0 (164) THR164 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ARG169 0 0 0 0 0 0 0 0 0 28 14 3 0 0 0 0 0 0 0 0 0 chainF (103) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 (161) ASN162 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 (162) HIS163 0 0 0 0 0 0 0 0 0 0 0 0 29 15 5 0 0 0 0 0 0 (163) THR164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (168) ARG169 0 0 0 0 0 0 0 0 0 0 1 12 26 0 0 0 0 0 0 0 0 prot.sequence ghnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvfalyytghyslydeysrinrkaynlpiyvgkavpagwrqsrisdhetragselsnrirehgrniaktsnldlcdfscrfvifeatgsdmistveaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfs/hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvfalyytghyslydeysrinrkaynlpiyvgkavpagwrqsrisdhetragselsnRirehgrniaktsnldlcdfscrfvifeatgsdmistveaalikiykplwntvvdgfgNHTpgagRfaQaksdwdvihpgrewaekctgvhsepyfieerikqyfsk >3nic_H: title=DNA BINDING AND CLEAVAGE BY THE GIY-YIG ENDONUCLEASE R.ECO29KI INACTIVE VARIANT Y49F organism=ESCHERICHIA COLI DNA sequence DC(M1):DG(N22) DG(M2):DC(N21) DG(M3):DC(N20) DG(M4):DC(N19) DA(M5):DT(N18) DG(M6):DC(N17) DG(M7):DC(N16) DC(M8):DG(N15) DC(M9):DG(N14) DC(M10):DG(N13) DG(M11):DC(N12) DC(M12):DG(N11) DG(M13):DC(N10) DG(M14):DC(N9) DG(M15):DC(N8) DC(M16):DG(N7) DC(M17):DG(N6) DG(M18):DC(N5) DC(M19):DG(N4) DC(M20):DG(N3) DG(M21):DC(N2) DC(M22):DG(N1) chainH ( 85) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (103) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (161) ASN162 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 (162) HIS163 0 0 0 0 0 0 0 0 0 0 0 0 32 13 4 0 0 0 0 0 0 0 (163) THR164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (168) ARG169 0 0 0 0 0 0 0 0 0 0 3 12 24 0 0 0 0 0 0 0 0 0 prot.sequence hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvfalyytghyslydeysrinrkaynlpiyvgkavpagwRqsrisdhetragselsnRirehgrniaktsnldlcdfscrfvifeatgsdmistveaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsk >3nm9_DGJ: title=HMGD(M13A)-DNA COMPLEX organism=DROSOPHILA MELANOGASTER DNA sequence DG(K2):DC(L11) DC(K3):DG(L10) DG(K4):DC(L9) DA(K5):DT(L8) DT(K6):DA(L7) DA(K7):DT(L6) DT(K8):DA(L5) DC(K9):DG(L4) DG(K10):DG(L2) DC(K11):DG(L1) DG(F2):DC(E11) DC(F3):DG(E10) DG(F4):DC(E9) DA(F5):DT(E8) DT(F6):DA(E7) DA(F7):DT(E6) DT(F8):DA(E5) DC(F9):DG(E4) DG(F10):DC(E3) DC(F11):DG(E2) DG(H2):DC(I11) DC(H3):DG(I10) DG(H4):DC(I9) DA(H5):DT(I8) DT(H6):DA(I7) DA(H7):DT(I6) DT(H8):DA(I5) DC(H9):DG(I4) DG(H10):DC(I3) DC(H11):DG(I2) chainD ( 6) ARG7 0 0 0 0 0 0 0 0 0 9 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) TYR12 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) THR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) ALA36 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 6) ARG7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 31) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 8 0 0 0 0 0 0 0 ( 32) THR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 ( 35) ALA36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 chainJ ( 31) VAL32 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) ALA36 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdkpkRplSaYalwlnsaresikrenpgikVTevAkrggelwramkdkseweakaakakddydravkefeang/sdkpkRplsayalwlnsaResikrenpgikVTevAkrggelwramkdkseweakaakakddydravkefeang/sdkpkrplsayalwlnsaresikrenpgikVtevAkrggelwramkdkseweakaakakddydravkefeang >3nm9_G:HMG-box; title=HMGD(M13A)-DNA COMPLEX organism=? DNA sequence DG(K2):DC(L11) DC(K3):DG(L10) DG(K4):DC(L9) DA(K5):DT(L8) DT(K6):DA(L7) DA(K7):DT(L6) DT(K8):DA(L5) DC(K9):DG(L4) DG(K10):DG(L2) DC(K11):DG(L1) DG(F2):DC(E11) DC(F3):DG(E10) DG(F4):DC(E9) DA(F5):DT(E8) DT(F6):DA(E7) DA(F7):DT(E6) DT(F8):DA(E5) DC(F9):DG(E4) DG(F10):DC(E3) DC(F11):DG(E2) DG(H2):DC(I11) DC(H3):DG(I10) DG(H4):DC(I9) DA(H5):DT(I8) DT(H6):DA(I7) DA(H7):DT(I6) DT(H8):DA(I5) DC(H9):DG(I4) DG(H10):DC(I3) DC(H11):DG(I2) chainG ( 6) ARG7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 31) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 8 0 0 0 0 0 0 0 ( 32) THR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 ( 35) ALA36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 prot.sequence sdkpkRplsayalwlnsaResikrenpgikVTevAkrggelwramkdkseweakaakakddydravkefeang >3o1m_A:Clavaminate_synthase-like; title=IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE organism=Escherichia coli DNA sequence DA(B2):DT(C13) DG(B3):DC(C12) DG(B4):DC(C11) DT(B5):DA(C10) DA(B6):DT(C9) DA(B7):DT(C8) DA(B9):DA(C7) DC(B11):DT(C6) DG(B12):DG(C5) DT(B13):DG(C4) chainA (116) CYS129 0 0 0 0 0 0 4 0 0 0 (148) ARG161 0 0 0 0 0 0 3 9 13 12 prot.sequence plaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdkdepdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagk >3o1o_A:Clavaminate_synthase-like; title=IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE organism=Escherichia coli DNA sequence DA(B2):DT(C13) DG(B3):DC(C12) DG(B4):DC(C11) DT(B5):DA(C10) DA(B6):DT(C9) DA(B7):DT(C8) DA(B9):DA(C7) DC(B11):DT(C6) DG(B12):DG(C5) DT(B13):DG(C4) chainA (116) CYS129 0 0 0 0 0 0 4 0 0 0 (148) ARG161 0 0 0 0 0 0 2 9 13 13 prot.sequence plaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdkdepdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagk >3o1p_A:Clavaminate_synthase-like; title=IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE organism=Escherichia coli DNA sequence DG(C4):DT(B13) DG(C5):DG(B12) DT(C6):DC(B11) DA(C7):DA(B9) DT(C8):DA(B7) DT(C9):DA(B6) DA(C10):DT(B5) DC(C11):DG(B4) DC(C12):DG(B3) DT(C13):DA(B2) chainA (117) CYS129 0 0 0 4 0 0 0 0 0 0 (149) ARG161 15 13 9 2 0 0 0 0 0 0 prot.sequence eplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdkdepdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagk >3o1r_A:Clavaminate_synthase-like; title=IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE organism=Escherichia coli DNA sequence DG(C4):DT(B13) DG(C5):DG(B12) DT(C6):DC(B11) DA(C7):DA(B9) DT(C8):DA(B7) DT(C9):DA(B6) DA(C10):DT(B5) DC(C11):DG(B4) DC(C12):DG(B3) DT(C13):DA(B2) chainA (117) CYS129 0 0 0 4 0 0 0 0 0 0 (149) ARG161 13 13 8 2 0 0 0 0 0 0 prot.sequence eplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdkdepdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagk >3o1s_A:Clavaminate_synthase-like; title=IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE organism=Escherichia coli DNA sequence DA(B2):DT(C13) DG(B3):DC(C12) DG(B4):DC(C11) DT(B5):DA(C10) DA(B6):DT(C9) DA(B7):DT(C8) DA(B9):DA(C7) DC(B11):DT(C6) DG(B12):DG(C5) DT(B13):DG(C4) chainA (117) CYS129 0 0 0 0 0 0 4 0 0 0 (149) ARG161 0 0 0 0 0 0 2 9 13 13 prot.sequence eplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdkdepdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagk >3o1t_A:Clavaminate_synthase-like; title=IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE organism=Escherichia coli DNA sequence DA(B2):DT(C13) DG(B3):DC(C12) DG(B4):DC(C11) DT(B5):DA(C10) DA(B6):DT(C9) DA(B7):DT(C8) DA(B9):DA(C7) DC(B11):DT(C6) DG(B12):DG(C5) DT(B13):DG(C4) chainA (117) CYS129 0 0 0 0 0 0 4 0 0 0 (149) ARG161 0 0 0 0 0 0 2 7 13 15 prot.sequence eplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdkdepdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagk >3o1u_A:Clavaminate_synthase-like; title=IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE organism=Escherichia coli DNA sequence DG(C4):DT(B13) DG(C5):DG(B12) DT(C6):DC(B11) DA(C7):DA(B9) DT(C8):DA(B7) DT(C9):DA(B6) DA(C10):DT(B5) DC(C11):DG(B4) DC(C12):DG(B3) DT(C13):DA(B2) chainA (117) CYS129 0 0 0 4 0 0 0 0 0 0 (149) ARG161 16 13 8 2 0 0 0 0 0 0 prot.sequence eplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdkdepdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagk >3o1v_A:Clavaminate_synthase-like; title=IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE organism=Escherichia coli DNA sequence DG(C4):DT(B13) DG(C5):DG(B12) DT(C6):DC(B11) DA(C7):DA(B9) DT(C8):DA(B7) DT(C9):DA(B6) DA(C10):DT(B5) DC(C11):DG(B4) DC(C12):DG(B3) DT(C13):DA(B2) chainA (116) CYS129 0 0 0 4 0 0 0 0 0 0 (148) ARG161 13 11 6 2 0 0 0 0 0 0 prot.sequence plaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdkdepdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagkk >3o3f_A:Ribonuclease_H-like; title=T. MARITIMA RNASE H2 D107N IN COMPLEX WITH NUCLEIC ACID SUBSTRATE AND MAGNESIUM IONS organism=Thermotoga maritima DNA sequence DG(C1) DA(C2) DA(C3) DT(C4) DC(C5) DA(C6) DG(C7) DG(C8) DT(C9) DG(C10) DT(C11) DC(C12) chainA ( 21) ARG22 0 0 0 0 0 0 0 2 0 0 0 0 (162) TYR163 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence gidelykkefgivagvdeagRgclagpvvaaavvlekeiegindskqlspakrerlldeimekaavgigiaspeeidlynifnatklamnralenlsvkpsfvlvngkgielsvpgtclvkgdqkskligaasivakvfrdrlmsefhrmypqfsfhkhkgYatkehlneirkngvlpihrlsfepvlelltddllreffekglisenrferilnllgarks >3o3g_A:Ribonuclease_H-like; title=T. MARITIMA RNASE H2 IN COMPLEX WITH NUCLEIC ACID SUBSTRATE AND CALCIUM IONS organism=Thermotoga maritima DNA sequence DG(C1) DA(C2) DA(C3) DT(C4) DC(C5) DA(C6) DG(C7) DG(C8) DT(C9) DG(C10) DT(C11) DC(C12) chainA ( 21) ARG22 0 0 0 0 0 0 0 2 0 0 0 0 (108) LYS109 0 0 0 0 0 0 0 0 0 2 2 0 (162) TYR163 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence gidelykkefgivagvdeagRgclagpvvaaavvlekeiegindskqlspakrerlldeimekaavgigiaspeeidlynifnatklamnralenlsvkpsfvlvdgKgielsvpgtclvkgdqkskligaasivakvfrdrlmsefhrmypqfsfhkhkgYatkehlneirkngvlpihrlsfepvlelltddllreffekglisenrferilnllgarks >3o3h_A:Ribonuclease_H-like; title=T. MARITIMA RNASE H2 D107N IN COMPLEX WITH NUCLEIC ACID SUBSTRATE AND MANGANESE IONS organism=Thermotoga maritima DNA sequence DG(C1) DA(C2) DA(C3) DT(C4) DC(C5) DA(C6) DG(C7) DG(C8) DT(C9) DG(C10) DT(C11) DC(C12) chainA ( 21) ARG22 0 0 0 0 0 0 0 1 0 0 0 0 (162) TYR163 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence gidelykkefgivagvdeagRgclagpvvaaavvlekeiegindskqlspakrerlldeimekaavgigiaspeeidlynifnatklamnralenlsvkpsfvlvngkgielsvpgtclvkgdqkskligaasivakvfrdrlmsefhrmypqfsfhkhkgYatkehlneirkngvlpihrlsfepvlelltddllreffekglisenrferilnllgarks >3o62_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE MODIFIED WITH A CISPLATIN 1,3-CIS- {PT(NH3)2}2+-D(GPTPG) INTRASTRAND CROSS-LINK organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DC(I68):DG(J225) DC(I69):DG(J224) DG(I70):DA(J222) DG(I72):DC(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DC(I78):DG(J215) DC(I79):DG(J214) DT(I80):DA(J213) DC(I81):DG(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DT(I86):DT(J208) DC(I87):DG(J206) DG(I88):DC(J205) DG(I89):DC(J204) DA(I90):DT(J203) DA(I91):DT(J202) DA(I92):DT(J201) DA(I93):DT(J200) DC(I94):DG(J199) DT(I95):DA(J198) DA(I96):DT(J197) DC(I97):DG(J196) DC(I98):DG(J195) DT(I99):DA(J194) DC(I100):DG(J193) DG(I101):DC(J192) DT(I102):DA(J191) DC(I103):DG(J190) DA(I104):DT(J189) DA(I105):DT(J188) DA(I106):DT(J187) DG(I107):DC(J186) DG(I108):DC(J185) DT(I109):DA(J184) DT(I110):DA(J183) DT(I111):DA(J182) DA(I112):DT(J181) DT(I113):DA(J180) DG(I114):DC(J179) DT(I115):DA(J178) DG(I116):DC(J177) DA(I117):DT(J176) DA(I118):DT(J175) DA(I119):DT(J174) DA(I120):DT(J173) DC(I121):DG(J172) DC(I122):DG(J171) DA(I123):DT(J170) DT(I124):DA(J169) DC(I125):DG(J168) DT(I126):DA(J167) DT(I127):DA(J166) DA(I128):DT(J165) DG(I129):DC(J164) DA(I130):DT(J163) DC(I131):DG(J162) DG(I132):DC(J161) DT(I133):DA(J160) DC(I134):DG(J159) DC(I135):DG(J158) DA(I136):DT(J157) DC(I137):DG(J156) DC(I138):DG(J155) DT(I139):DA(J154) DA(I140):DT(J153) DT(I141):DA(J152) DA(I142):DT(J151) DA(I143):DT(J150) DC(I144):DG(J149) DT(I145):DA(J148) DA(I146):DT(J147) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 5) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 12) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG42 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 1) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYRpgtvalReirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rdNIQgitkpaIrrlarrggvkrisglIyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/KtrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkRstitsreiqtavrlllpgelakhavsegtkavtkytsak >3o62_D:Histone-fold; title=NUCLEOSOME CORE PARTICLE MODIFIED WITH A CISPLATIN 1,3-CIS- {PT(NH3)2}2+-D(GPTPG) INTRASTRAND CROSS-LINK organism=? DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DC(I68):DG(J225) DC(I69):DG(J224) DG(I70):DA(J222) DG(I72):DC(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DC(I78):DG(J215) DC(I79):DG(J214) DT(I80):DA(J213) DC(I81):DG(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DT(I86):DT(J208) DC(I87):DG(J206) DG(I88):DC(J205) DG(I89):DC(J204) DA(I90):DT(J203) DA(I91):DT(J202) DA(I92):DT(J201) DA(I93):DT(J200) DC(I94):DG(J199) DT(I95):DA(J198) DA(I96):DT(J197) DC(I97):DG(J196) DC(I98):DG(J195) DT(I99):DA(J194) DC(I100):DG(J193) DG(I101):DC(J192) DT(I102):DA(J191) DC(I103):DG(J190) DA(I104):DT(J189) DA(I105):DT(J188) DA(I106):DT(J187) DG(I107):DC(J186) DG(I108):DC(J185) DT(I109):DA(J184) DT(I110):DA(J183) DT(I111):DA(J182) DA(I112):DT(J181) DT(I113):DA(J180) DG(I114):DC(J179) DT(I115):DA(J178) DG(I116):DC(J177) DA(I117):DT(J176) DA(I118):DT(J175) DA(I119):DT(J174) DA(I120):DT(J173) DC(I121):DG(J172) DC(I122):DG(J171) DA(I123):DT(J170) DT(I124):DA(J169) DC(I125):DG(J168) DT(I126):DA(J167) DT(I127):DA(J166) DA(I128):DT(J165) DG(I129):DC(J164) DA(I130):DT(J163) DC(I131):DG(J162) DG(I132):DC(J161) DT(I133):DA(J160) DC(I134):DG(J159) DC(I135):DG(J158) DA(I136):DT(J157) DC(I137):DG(J156) DC(I138):DG(J155) DT(I139):DA(J154) DA(I140):DT(J153) DT(I141):DA(J152) DA(I142):DT(J151) DA(I143):DT(J150) DC(I144):DG(J149) DT(I145):DA(J148) DA(I146):DT(J147) chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3o9x_A:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF THE E. COLI ANTITOXIN MQSA (YGIT/B3021) IN COMPLEX WITH ITS GENE PROMOTER organism=Escherichia coli DNA sequence DA(E1):DT(F26) DG(E2):DC(F25) DT(E3):DA(F24) DT(E4):DA(F23) DA(E5):DT(F22) DT(E6):DA(F21) DA(E7):DT(F20) DA(E8):DT(F19) DC(E9):DG(F18) DC(E10):DG(F17) DT(E11):DA(F16) DA(E12):DT(F15) DA(E13):DT(F14) DA(E14):DT(F13) DA(E15):DT(F12) DG(E16):DC(F11) DG(E17):DC(F10) DT(E18):DA(F9) DT(E19):DA(F8) DA(E20):DT(F7) DA(E21):DT(F6) DT(E22):DA(F5) DT(E23):DA(F4) DA(E24):DT(F3) DC(E25):DG(F2) DA(E26):DT(F1) chainA ( 86) GLN85 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) VAL96 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) ASN97 0 0 0 0 0 4 5 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) SER100 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG101 0 0 0 0 0 0 0 0 4 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmkcpvchqgemvsgikdipytfrgrktvlkgihglycvhceesimnkeesdafmaqvkafrasvnaetvapefivkvrkklsltQkeaseifgggVNafSRyekgnaqphpstikllrvldkhpellneir >3o9x_AB:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF THE E. COLI ANTITOXIN MQSA (YGIT/B3021) IN COMPLEX WITH ITS GENE PROMOTER organism=Escherichia coli DNA sequence DA(E1):DT(F26) DG(E2):DC(F25) DT(E3):DA(F24) DT(E4):DA(F23) DA(E5):DT(F22) DT(E6):DA(F21) DA(E7):DT(F20) DA(E8):DT(F19) DC(E9):DG(F18) DC(E10):DG(F17) DT(E11):DA(F16) DA(E12):DT(F15) DA(E13):DT(F14) DA(E14):DT(F13) DA(E15):DT(F12) DG(E16):DC(F11) DG(E17):DC(F10) DT(E18):DA(F9) DT(E19):DA(F8) DA(E20):DT(F7) DA(E21):DT(F6) DT(E22):DA(F5) DT(E23):DA(F4) DA(E24):DT(F3) DC(E25):DG(F2) DA(E26):DT(F1) chainA ( 86) GLN85 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) VAL96 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) ASN97 0 0 0 0 0 4 5 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) SER100 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG101 0 0 0 0 0 0 0 0 4 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 97) VAL96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 98) ASN97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 4 5 0 0 0 0 0 0 (101) SER100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (102) ARG101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 4 0 0 0 0 0 0 0 0 0 prot.sequence hmkcpvchqgemvsgikdipytfrgrktvlkgihglycvhceesimnkeesdafmaqvkafrasvnaetvapefivkvrkklsltQkeaseifgggVNafSRyekgnaqphpstikllrvldkhpellneir/hmkcpvchqgemvsgikdipytfrgrktvlkgihglycvhceesimnkeesdafmaqvkafrasvnaetvapefivkvrkklsltqkeaseifgggVNafSRyekgnaqphpstikllrvldkhpellneir >3od8_CD:Glucocorticoid_receptor-like_DNA-binding_domain; title=HUMAN PARP-1 ZINC FINGER 1 (ZN1) BOUND TO DNA organism=Homo sapiens DNA sequence DG(K1):DC(L10) DC(K2):DG(L9) DC(K3):DG(L8) DG(K4):DC(L7) DC(K5):DG(L6) DT(K6):DA(L5) DT(K7):DA(L4) DG(K8):DC(L3) DG(K9):DC(L2) DG(K10):DC(L1) chainC ( 39) MET43 0 0 0 0 0 0 0 0 0 4 ( 40) PHE44 0 0 0 0 0 0 0 0 0 49 ( 44) VAL48 0 0 0 0 0 0 0 0 0 9 chainD ( 14) ARG18 0 0 0 1 0 0 0 0 0 0 ( 40) PHE44 50 0 0 0 0 0 0 0 0 0 ( 44) VAL48 6 0 0 0 0 0 0 0 0 0 ( 45) PRO49 2 0 0 0 0 0 0 0 0 0 prot.sequence sdklyrveyaksgRasckkcsesipkdslrmaimvqspMFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaea/sdklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeagg >3od8_EF:Glucocorticoid_receptor-like_DNA-binding_domain; title=HUMAN PARP-1 ZINC FINGER 1 (ZN1) BOUND TO DNA organism=Homo sapiens DNA sequence DC(N1):DG(M10) DC(N2):DG(M9) DC(N3):DG(M8) DA(N4):DT(M7) DA(N5):DT(M6) DG(N6):DC(M5) DC(N7):DG(M4) DG(N8):DC(M3) DG(N9):DC(M2) DC(N10):DG(M1) chainE ( 14) ARG18 0 0 1 0 0 0 0 0 0 0 ( 40) PHE44 50 0 0 0 0 0 0 0 0 0 ( 44) VAL48 6 0 0 0 0 0 0 0 0 0 ( 45) PRO49 1 0 0 0 0 0 0 0 0 0 chainF ( 14) ARG18 0 0 0 0 0 0 1 1 0 0 ( 40) PHE44 0 0 0 0 0 0 0 0 0 59 ( 45) PRO49 0 0 0 0 0 0 0 0 0 2 prot.sequence sdklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaea/sdklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkvPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaggv >3od8_G:Glucocorticoid_receptor-like_DNA-binding_domain; title=HUMAN PARP-1 ZINC FINGER 1 (ZN1) BOUND TO DNA organism=Homo sapiens DNA sequence DG(O1):DC(P10) DC(O2):DG(P9) DC(O3):DG(P8) DG(O4):DC(P7) DC(O5):DG(P6) DT(O6):DA(P5) DT(O7):DA(P4) DG(O8):DC(P3) DG(O9):DC(P2) DG(O10):DC(P1) chainG ( 14) ARG18 0 0 0 0 0 0 0 1 0 0 ( 39) MET43 0 0 0 0 0 0 0 0 0 2 ( 40) PHE44 0 0 0 0 0 0 0 0 0 47 ( 44) VAL48 0 0 0 0 0 0 0 0 0 12 ( 45) PRO49 0 0 0 0 0 0 0 0 0 2 prot.sequence sdklyrveyaksgRasckkcsesipkdslrmaimvqSpMFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaea >3od8_GH:Glucocorticoid_receptor-like_DNA-binding_domain; title=HUMAN PARP-1 ZINC FINGER 1 (ZN1) BOUND TO DNA organism=Homo sapiens DNA sequence DG(O1):DC(P10) DC(O2):DG(P9) DC(O3):DG(P8) DG(O4):DC(P7) DC(O5):DG(P6) DT(O6):DA(P5) DT(O7):DA(P4) DG(O8):DC(P3) DG(O9):DC(P2) DG(O10):DC(P1) chainG ( 14) ARG18 0 0 0 0 0 0 0 1 0 0 ( 39) MET43 0 0 0 0 0 0 0 0 0 2 ( 40) PHE44 0 0 0 0 0 0 0 0 0 47 ( 44) VAL48 0 0 0 0 0 0 0 0 0 12 ( 45) PRO49 0 0 0 0 0 0 0 0 0 2 chainH ( 14) ARG18 0 0 2 4 0 0 0 0 0 0 ( 40) PHE44 53 0 0 0 0 0 0 0 0 0 ( 44) VAL48 2 0 0 0 0 0 0 0 0 0 ( 45) PRO49 2 0 0 0 0 0 0 0 0 0 prot.sequence sdklyrveyaksgRasckkcsesipkdslrmaimvqSpMFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaea/sdklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeag >3oda_C:Glucocorticoid_receptor-like_DNA-binding_domain; title=HUMAN PARP-1 ZINC FINGER 1 (ZN1) BOUND TO DNA organism=Homo sapiens DNA sequence DG(K1):DC(L10) DC(K2):DG(L9) DC(K3):DG(L8) DT(K4):DA(L7) DG(K5):DC(L6) DC(K6):DG(L5) DA(K7):DT(L4) DG(K8):DC(L3) DG(K9):DC(L2) DC(K10):DG(L1) chainC ( 14) ARG18 0 0 0 0 0 0 0 2 0 0 ( 39) MET43 0 0 0 0 0 0 0 0 0 6 ( 40) PHE44 0 0 0 0 0 0 0 0 0 52 ( 44) VAL48 0 0 0 0 0 0 0 0 0 5 prot.sequence sdklyrveyaksgRasckkcsesipkdslrmaimvqspMFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaea >3oda_CD:Glucocorticoid_receptor-like_DNA-binding_domain; title=HUMAN PARP-1 ZINC FINGER 1 (ZN1) BOUND TO DNA organism=Homo sapiens DNA sequence DG(K1):DC(L10) DC(K2):DG(L9) DC(K3):DG(L8) DT(K4):DA(L7) DG(K5):DC(L6) DC(K6):DG(L5) DA(K7):DT(L4) DG(K8):DC(L3) DG(K9):DC(L2) DC(K10):DG(L1) chainC ( 14) ARG18 0 0 0 0 0 0 0 2 0 0 ( 39) MET43 0 0 0 0 0 0 0 0 0 6 ( 40) PHE44 0 0 0 0 0 0 0 0 0 52 ( 44) VAL48 0 0 0 0 0 0 0 0 0 5 chainD ( 14) ARG18 0 0 3 0 0 0 0 0 0 0 ( 40) PHE44 50 0 0 0 0 0 0 0 0 0 ( 44) VAL48 3 0 0 0 0 0 0 0 0 0 ( 45) PRO49 1 0 0 0 0 0 0 0 0 0 prot.sequence sdklyrveyaksgRasckkcsesipkdslrmaimvqspMFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaea/sdklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeagg >3oda_EF:Glucocorticoid_receptor-like_DNA-binding_domain; title=HUMAN PARP-1 ZINC FINGER 1 (ZN1) BOUND TO DNA organism=Homo sapiens DNA sequence DG(M1):DC(N10) DC(M2):DG(N9) DC(M3):DG(N8) DT(M4):DA(N7) DG(M5):DC(N6) DC(M6):DG(N5) DA(M7):DT(N4) DG(M8):DC(N3) DG(M9):DC(N2) DC(M10):DG(N1) chainE ( 13) ARG18 0 0 0 0 0 1 0 5 0 0 ( 38) MET43 0 0 0 0 0 0 0 0 0 8 ( 39) PHE44 0 0 0 0 0 0 0 0 0 46 ( 43) VAL48 0 0 0 0 0 0 0 0 0 5 chainF ( 14) ARG18 0 0 4 0 0 0 0 0 0 0 ( 40) PHE44 46 0 0 0 0 0 0 0 0 0 ( 44) VAL48 3 0 0 0 0 0 0 0 0 0 ( 45) PRO49 1 0 0 0 0 0 0 0 0 0 prot.sequence dklyrveyaksgRasckkcsesipkdslrmaimvqspMFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaea/sdklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaggv >3oda_GH:Glucocorticoid_receptor-like_DNA-binding_domain; title=HUMAN PARP-1 ZINC FINGER 1 (ZN1) BOUND TO DNA organism=Homo sapiens DNA sequence DG(O1):DC(P10) DC(O2):DG(P9) DC(O3):DG(P8) DT(O4):DA(P7) DG(O5):DC(P6) DC(O6):DG(P5) DA(O7):DT(P4) DG(O8):DC(P3) DG(O9):DC(P2) DC(O10):DG(P1) chainG ( 14) ARG18 0 0 0 0 0 0 0 1 0 0 ( 39) MET43 0 0 0 0 0 0 0 0 0 7 ( 40) PHE44 0 0 0 0 0 0 0 0 0 31 ( 44) VAL48 0 0 0 0 0 0 0 0 0 12 ( 45) PRO49 0 0 0 0 0 0 0 0 0 2 chainH ( 14) ARG18 0 0 3 0 0 0 0 0 0 0 ( 40) PHE44 51 0 0 0 0 0 0 0 0 0 ( 44) VAL48 3 0 0 0 0 0 0 0 0 0 ( 45) PRO49 1 0 0 0 0 0 0 0 0 0 prot.sequence sdklyrveyaksgRasckkcsesipkdslrmaimvqSpMFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaea/sdklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeag >3odc_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=HUMAN PARP-1 ZINC FINGER 2 (ZN2) BOUND TO DNA organism=Homo sapiens DNA sequence DC(F1):DG(E8) DG(F2):DC(E7) DT(F3):DA(E6) DC(F4):DG(E5) DT(F5):DA(E4) DG(F6):DC(E3) DG(F7):DC(E2) DG(F8):DC(E1) chainB ( 19) ARG122 0 0 0 7 3 0 0 0 ( 45) LYS148 2 0 0 0 0 0 0 0 ( 48) LEU151 19 0 0 0 0 0 0 0 ( 51) ILE154 2 0 0 0 0 0 0 0 prot.sequence mkaektlgdfaaeyaksnRstckgcmekiekgqvrlskkmvdpeKpqLgmIdrwyhpgcfvknreelgfrpeysasqlkgfsllatedkealkkqlpgvk >3ode_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=HUMAN PARP-1 ZINC FINGER 2 (ZN2) BOUND TO DNA organism=Homo sapiens DNA sequence DC(E1):DG(F8) DC(E2):DG(F7) DC(E3):DG(F6) DA(E4):DT(F5) DA(E5):DT(F4) DG(E6):DC(F3) DC(E7):DG(F2) DG(E8):DC(F1) chainB ( 15) ARG122 0 0 0 5 10 0 0 0 ( 41) LYS148 0 0 0 0 0 0 0 3 ( 44) LEU151 0 0 0 0 0 0 0 23 ( 47) ILE154 0 0 0 0 0 0 0 3 prot.sequence ktlgdfaaeyaksnRstckgcmekiekgqvrlskkmvdpeKpqLgmIdrwyhpgcfvknreelgfrpeysasqlkgfsllatedkealkkqlp >3odh_AB:Restriction_endonuclease-like; title=STRUCTURE OF OKRAI/DNA COMPLEX organism=Oceanobacter kriegii DNA sequence DT(C1):DA(D12) DA(C2):DT(D11) DT(C3):DA(D10) DG(C4):DC(D9) DG(C5):DC(D8) DA(C6):DT(D7) DT(C7):DA(D6) DC(C8):DG(D5) DC(C9):DG(D4) DA(C10):DT(D3) DT(C11):DA(D2) chainA (104) ASN104 0 0 0 0 7 8 1 0 0 0 0 (110) ARG110 0 0 0 0 0 0 0 1 1 0 0 (137) TYR137 0 0 1 0 0 0 0 0 0 0 0 (141) THR141 0 0 0 0 0 3 0 0 0 0 0 (142) ASP142 0 0 0 4 4 0 0 0 0 0 0 (143) ARG143 0 0 18 16 7 0 0 0 0 0 0 (144) VAL144 0 0 0 0 0 1 0 0 0 0 0 (189) ASP189 0 0 0 0 0 0 6 6 3 0 0 (191) ARG191 0 0 0 0 2 4 0 0 0 0 0 chainB (104) ASN104 0 0 0 0 0 0 11 5 0 0 0 (110) ARG110 0 0 0 5 2 0 0 0 0 0 0 (134) ARG134 0 0 0 0 0 0 0 0 0 1 0 (137) TYR137 0 0 0 0 0 0 0 0 0 1 0 (141) THR141 0 0 0 0 0 0 4 0 0 0 0 (142) ASP142 0 0 0 0 0 0 0 5 5 1 0 (143) ARG143 0 0 0 0 0 0 0 5 17 24 0 (149) GLU149 0 0 0 0 0 0 0 0 0 1 0 prot.sequence mkikrievlinngsvpgipmilneiqdaiktvswpegnnsfvinpvrkgngvkpiknscmrhlhqkgwalehpvrikaemrpgpldavkmiggkafalewetgNissshRainkmvmgmlerviiggvlilpsrdmYnylTDRVgnfrelepyfsvwrqfnlkdaylaiveiehdsvdaqvslipkgtDgRair/mkikrievlinngsvpgipmilneiqdaiktvswpegnnsfvinpvrkgngvkpiknscmrhlhqkgwalehpvrikaemrpgpldavkmiggkafalewetgNiSsshRainkmvmgmlerviiggvlilpsRdmYnylTDRvgnfrElepyfsvwrqfnlkdaylaiveiehdsvdaqvslipkgtdgra >3odh_EF:Restriction_endonuclease-like; title=STRUCTURE OF OKRAI/DNA COMPLEX organism=Oceanobacter kriegii DNA sequence DT(H1):DA(G12) DA(H2):DT(G11) DT(H3):DA(G10) DG(H4):DC(G9) DG(H5):DC(G8) DA(H6):DT(G7) DT(H7):DA(G6) DC(H8):DG(G5) DC(H9):DG(G4) DA(H10):DT(G3) DT(H11):DA(G2) DA(H12):DT(G1) chainE (104) ASN104 0 0 0 0 0 1 7 7 0 0 0 0 (110) ARG110 0 0 0 1 1 0 0 0 0 0 0 0 (137) TYR137 0 0 0 0 0 0 0 0 0 1 0 0 (141) THR141 0 0 0 0 0 0 3 1 0 0 0 0 (142) ASP142 0 0 0 0 0 0 0 4 4 0 0 0 (143) ARG143 0 0 0 0 0 0 0 6 16 23 0 0 (144) VAL144 0 0 0 0 0 0 1 0 0 0 0 0 (189) ASP189 0 0 0 3 6 3 0 0 0 0 0 0 (191) ARG191 0 0 0 0 0 0 4 4 0 0 0 0 chainF ( 81) ARG81 0 0 0 0 0 0 0 0 0 0 6 5 (104) ASN104 0 0 0 0 7 10 0 0 0 0 0 0 (110) ARG110 0 0 0 0 0 0 0 2 5 0 0 0 (134) ARG134 0 0 1 0 0 0 0 0 0 0 0 0 (137) TYR137 0 0 1 0 0 0 0 0 0 0 0 0 (141) THR141 0 0 0 0 0 1 0 0 0 0 0 0 (142) ASP142 0 0 0 6 5 0 0 0 0 0 0 0 (143) ARG143 0 0 25 18 5 0 0 0 0 0 0 0 prot.sequence mkikrievlinngsvpgipmilneiqdaiktvswpegnnsfvinpvrkgngvkpiknscmrhlhqkgwalehpvrikaemrpgpldavkmiggkafalewetgNissshRainkmvmgmlerviiggvlilpsrdmYnylTDRVgnfrelepyfsvwrqfnlkdaylaiveiehdsvdaqvslipkgtDgRair/mkikrievlinngsvpgipmilneiqdaiktvswpegnnsfvinpvrkgngvkpiknscmrhlhqkgwalehpvrikaemRpgpldavkmiggkafalewetgNiSsshRainkmvmgmlerviiggvlilpsRdmYnylTDRvgnfrelepyfsvwrqfnlkdaylaiveiehdsvdaqvslipkgtdgrair >3odh_F:Restriction_endonuclease-like; title=STRUCTURE OF OKRAI/DNA COMPLEX organism=Oceanobacter kriegii DNA sequence DT(G1):DA(H12) DA(G2):DT(H11) DT(G3):DA(H10) DG(G4):DC(H9) DG(G5):DC(H8) DA(G6):DT(H7) DT(G7):DA(H6) DC(G8):DG(H5) DC(G9):DG(H4) DA(G10):DT(H3) DT(G11):DA(H2) chainF ( 81) ARG81 5 6 0 0 0 0 0 0 0 0 0 (104) ASN104 0 0 0 0 0 0 10 7 0 0 0 (110) ARG110 0 0 0 5 2 0 0 0 0 0 0 (134) ARG134 0 0 0 0 0 0 0 0 0 1 0 (137) TYR137 0 0 0 0 0 0 0 0 0 1 0 (141) THR141 0 0 0 0 0 0 1 0 0 0 0 (142) ASP142 0 0 0 0 0 0 0 5 6 0 0 (143) ARG143 0 0 0 0 0 0 0 5 18 25 0 prot.sequence mkikrievlinngsvpgipmilneiqdaiktvswpegnnsfvinpvrkgngvkpiknscmrhlhqkgwalehpvrikaemRpgpldavkmiggkafalewetgNiSsshRainkmvmgmlerviiggvlilpsRdmYnylTDRvgnfrelepyfsvwrqfnlkdaylaiveiehdsvdaqvslipkgtdgrair >3ogd_A:DNA-glycosylase;TATA-box_binding_protein-like; title=ALKA UNDAMAGED DNA COMPLEX: INTERROGATION OF A G*:C BASE PAIR organism=Escherichia coli DNA sequence DC(C3):DG(B23) DA(C4):DT(B22) BRU(C5):DA(B21) DG(C6):DC(B20) DA(C7):DT(B19) DC(C8):DG(B18) BRU(C9):DA(B17) DG(C10):DC(B16) DC(C11):DG(B15) chainA (132) CYS125 0 0 0 0 0 1 0 0 0 prot.sequence madigsefytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqCvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddylikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpde >3ogu_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MUTANT 5P20 COMPLEXED WITH 6BP OF DNA organism=Homo sapiens DNA sequence DC(P1):DG(T6) DA(P2):DT(T5) DG(P3):DC(T4) DA(P4):DT(T3) DT(P5):DA(T2) DG(P6):DC(T1) chainA prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinlltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgktKfmgvcqlpskndekeyphrridirlipkdqyycgmlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3oh6_A:DNA-glycosylase;TATA-box_binding_protein-like; title=ALKA UNDAMAGED DNA COMPLEX: INTERROGATION OF A C:G BASE PAIR organism=Escherichia coli DNA sequence DG(B15):DC(C11) DC(B16):DG(C10) DA(B17):BRU(C9) DT(B18):DA(C8) DT(B19):DA(C7) DC(B20):DG(C6) DA(B21):BRU(C5) DT(B22):DA(C4) DG(B23):DC(C3) DT(B24):DA(C2) DC(B25):DG(C1) chainA (132) LEU125 0 0 0 0 0 1 0 0 0 0 0 prot.sequence madigsefytlnwqppydwswmlgflaaravssvetvadsyyarslavgeyrgvvtaipdiarhtlhinlsaglepvaaeclakmsrlfdlqcnpqivngalgrlgaarpglrlpgcvdafeqgvrailgqLvsvamaakltarvaqlygerlddfpeyicfptpqrlaaadpqalkalgmplkraealihlanaalegtlpmtipgdveqamktlqtfpgigrwtanyfalrgwqakdvflpddclikqrfpgmtpaqirryaerwkpwrsyallhiwytegwqpde >3oha_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=YEAST DNA POLYMERASE ETA INSERTING DCTP OPPOSITE AN 8OXOG LESION organism=Saccharomyces cerevisiae DNA sequence DG(P1):DC(T16) DT(P2):DA(T15) DC(P3):DG(T14) DC(P4):DG(T13) DT(P5):DA(T12) DC(P6):DG(T11) DC(P7):DG(T10) DC(P8):DG(T9) DC(P9):DG(T8) DT(P10):DA(T7) chainA (400) MET396 0 0 0 0 0 0 0 0 0 2 (460) ARG456 0 0 0 0 0 8 1 0 0 0 (462) SER458 0 0 0 0 1 0 0 0 0 0 prot.sequence gdphmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvqwnsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpakqisvedhkvslepyrresrkalaifkwacdlverasidevfldlgricfnmlmfdneyeltgdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvilalgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdydrstsnidplktadlaeklfklsrgryglplssrpvvksmMsnknlrgkscnsivdciswlevfcaeltsriqdleqeynkiviprtvsislktksyevyRkSgpvaykginfqshellkvgikfvtdldikgknksyypltklsmtitnfdiidlq >3ohb_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=YEAST DNA POLYMERASE ETA EXTENDING FROM AN 8-OXOG LESION organism=Saccharomyces cerevisiae DNA sequence DA(T7):DT(P10) DG(T8):DC(P9) DG(T9):DC(P8) DG(T10):DC(P7) DG(T11):DC(P6) DA(T12):DT(P5) DG(T13):DC(P4) DG(T14):DC(P3) DA(T15):DT(P2) DC(T16):DG(P1) chainA (399) MET396 4 2 0 0 0 0 0 0 0 0 (459) ARG456 0 0 0 1 8 0 0 0 0 0 (461) SER458 0 0 0 0 0 1 0 0 0 0 prot.sequence dphmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvqwnsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpakqisvedhkvslepyrresrkalaifkwacdlverasidevfldlgricfnmlmfdneyeltgdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvilalgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdydrstsnidplktadlaeklfklsrgryglplssrpvvksmMsnknlrgkscnsivdciswlevfcaeltsriqdleqeynkiviprtvsislktksyevyRkSgpvaykginfqshellkvgikfvtdldikgknksyypltklsmtitnfdiidlq >3ojs_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=SNAPSHOTS OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS PROCESSING C5 MODIFIED THYMIDINES organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (247) LYS540 0 0 0 0 0 0 0 4 5 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 0 4 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 (290) ASN583 0 0 0 0 0 0 0 0 1 10 1 (461) GLN754 0 0 0 0 0 0 0 0 0 0 1 (491) HIS784 0 0 0 0 0 0 0 0 0 0 2 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3oju_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=SNAPSHOT OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS PROCESSING C5 MODIFIED THYMIDIES organism=Thermus aquaticus DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 5 4 0 0 0 0 0 0 0 (252) TYR545 0 1 0 0 0 0 0 0 0 0 0 (280) ARG573 4 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 0 9 0 0 0 0 0 0 0 0 0 (461) GLN754 1 0 0 0 0 0 0 0 0 0 0 (491) HIS784 2 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3on0_ABCD:TraM-like;IHF-like_DNA-binding_proteins; title=CRYSTAL STRUCTURE OF THE PED208 TRAM-SBMA COMPLEX organism=Escherichia coli DNA sequence DA(P1) DG(P2) DA(P3) DT(P4) DT(P5) DC(P6) DG(P7) DA(P8) DA(P9) DT(P10) DC(P11) DT(P12) DA(P13) DG(P14) DA(P15) DT(P16) DT(P17) DC(P18) DG(P19) DA(P20) DA(P21) DT(P22) DC(P23) DT(P24) chainA ( 2) LYS3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 ( 4) GLN5 0 0 0 0 0 0 0 0 0 0 0 0 0 16 10 4 0 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 chainC ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 ( 4) GLN5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainD ( 2) LYS3 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) GLN5 0 15 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR7 16 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pKiqtyvnnnvyeqitdlvtirkqegieeaslsnvssmllelglrvymiqqekfnqmeynklmlenvsrvramcteilkmsvlnqesiasgnfdyavikpaidkfareqvsiffpddeddq/pKiQtYvnnnvyeqitdlvtirkqegieeaslsnvssmllelglrvymiqqekreggfnqmeynklmlenvsrvramcteilkmsvlnqesiasgnfdyavikpaidkfareqvsiff/pKiQtyvnnnvyeqitdlvtirkqegieeaslsnvssmllelglrvymiqqekreggfnqmeynklmlenvsrvramcteilkmsvlnqesiasgnfdyavikpaidkfareqvsiff/pKiQtYvnnnvyeqitdlvtirkqegieeaslsnvssmllelglrvfnqmeynklmlenvsrvramcteilkmsvlnqesiasgnfdyavikpaidkfareqvsiff >3on0_D:TraM-like;IHF-like_DNA-binding_proteins; title=CRYSTAL STRUCTURE OF THE PED208 TRAM-SBMA COMPLEX organism=Escherichia coli DNA sequence DA(P1) DG(P2) DA(P3) DT(P4) DT(P5) DC(P6) DG(P7) DA(P8) DA(P9) DT(P10) DC(P11) DT(P12) DA(P13) DG(P14) DA(P15) DT(P16) DT(P17) DC(P18) DG(P19) DA(P20) DA(P21) DT(P22) DC(P23) DT(P24) chainD ( 2) LYS3 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) GLN5 0 15 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR7 16 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pKiQtYvnnnvyeqitdlvtirkqegieeaslsnvssmllelglrvfnqmeynklmlenvsrvramcteilkmsvlnqesiasgnfdyavikpaidkfareqvsiff >3ool_A:Homing_endonucleases; title=I-SCEI COMPLEXED WITH C/G+4 DNA SUBSTRATE organism=Saccharomyces cerevisiae DNA sequence DG(D2):DC(C25) DT(D3):DA(C24) DA(D4):DT(C23) DT(D5):DA(C22) DT(D6):DA(C21) DA(D7):DT(C20) DC(D8):DG(C19) DC(D9):DG(C18) DC(D10):DG(C17) DG(D11):DC(C16) DG(D12):DC(C15) DT(D13):DA(C14) DT(D14):DA(C13) DA(D15):DT(C12) DT(D16):DA(C11) DC(D17):DG(C10) DC(D18):DG(C9) DC(D19):DG(C8) DT(D20):DA(C7) DA(D21):DT(C6) DG(D22):DC(C5) DC(D23):DG(C4) DG(D24):DC(C3) DT(D25):DA(C2) chainA ( 12) PRO14 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ASN15 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TYR46 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG48 0 0 0 0 0 0 0 11 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG50 0 0 0 0 0 4 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) GLN59 0 0 0 0 0 0 0 4 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLU61 0 0 0 0 0 0 0 0 0 2 9 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) LYS86 0 0 0 0 0 0 0 0 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG88 0 0 0 0 0 0 0 0 0 16 15 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ASN90 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 94) VAL96 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 96) THR98 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (100) GLN102 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ASP150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (149) TYR151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 1 0 0 0 0 0 (150) ASN152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 8 0 0 0 (161) ASN163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (163) GLN165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 (190) ASN192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 3 1 0 0 0 0 0 0 (191) LYS193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 8 0 0 0 0 0 0 0 prot.sequence nikknqvmnlgPNskllkeyksqlielnieqfeagiglilgdaYiRsRdegktycmQfEwknkaymdhvcllydqwvlspphkKeRvNhlgnlViTwgaQtfkhqafnklanlfivnnkktipnnlvenyltpmslaywfmddggkwDYNknstnksivlNtQsftfeeveylvkglrnkfqlncyvkiNKnkpiiyidsmsylifynlikpylipqmmyklp >3oor_A:Homing_endonucleases; title=I-SCEI MUTANT (K86R/G100T)COMPLEXED WITH C/G+4 DNA SUBSTRATE organism=Saccharomyces cerevisiae DNA sequence DA(C2):DT(D25) DC(C3):DG(D24) DG(C4):DC(D23) DC(C5):DG(D22) DT(C6):DA(D21) DA(C7):DT(D20) DG(C8):DC(D19) DG(C9):DC(D18) DG(C10):DC(D17) DA(C11):DT(D16) DT(C12):DA(D15) DA(C13):DT(D14) DA(C14):DT(D13) DC(C15):DG(D12) DC(C16):DG(D11) DG(C17):DC(D10) DG(C18):DC(D9) DG(C19):DC(D8) DT(C20):DA(D7) DA(C21):DT(D6) DA(C22):DT(D5) DT(C23):DA(D4) DA(C24):DT(D3) DC(C25):DG(D2) chainA ( 12) PRO14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 ( 13) ASN15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 ( 44) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 ( 46) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 10 0 0 0 0 0 0 0 ( 48) ARG50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 8 2 0 0 0 0 0 ( 57) GLN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 4 0 0 0 0 0 0 0 ( 59) GLU61 0 0 0 0 0 0 0 0 0 0 0 0 9 9 1 0 0 0 0 0 0 0 0 0 ( 84) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 8 0 0 0 0 0 0 0 0 ( 86) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 7 12 14 0 0 0 0 0 0 0 0 0 ( 88) ASN90 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) HIS91 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) VAL96 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (100) GLN102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 (147) TRP149 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ASP150 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) TYR151 0 0 0 0 0 1 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ASN152 0 0 0 9 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) ASN163 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) GLN165 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) ASN192 0 0 0 0 0 0 2 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) LYS193 0 0 0 0 0 0 0 7 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nikknqvmnlgPNskllkeyksqlielnieqfeagiglilgdaYiRsRdegktycmQfEwknkaymdhvcllydqwvlspphkReRvNHlgnlVitwtaQtfkhqafnklanlfivnnkktipnnlvenyltpmslaywfmddggkWDYNknstnksivlNtQsftfeeveylvkglrnkfqlncyvkiNKnkpiiyidsmsylifynlikpylipqmmyklp >3oqg_A: title=RESTRICTION ENDONUCLEASE HPY188I IN COMPLEX WITH SUBSTRATE DNA organism=HELICOBACTER PYLORI DNA sequence DG(D-4):DC(C4) DT(D-3):DA(C3) DT(D-2):DA(C2) DC(D-1):DG(C1) DA(D0):DT(C0) DG(D1):DC(C-1) DA(D2):DT(C-2) DT(D3):DA(C-3) DC(D4):DG(C-4) chainA ( 90) ARG84 0 0 0 3 0 0 0 0 0 ( 92) GLN86 10 5 0 0 0 0 0 0 0 ( 93) SER87 0 0 10 3 0 0 0 0 0 ( 96) CYS90 0 9 10 0 0 0 0 0 0 (101) TYR95 0 9 3 0 0 0 0 0 0 (106) THR100 0 0 6 0 0 0 0 0 0 (107) CYS101 0 0 1 0 0 0 0 0 0 (108) SER102 0 0 0 10 9 0 0 0 0 (109) THR103 0 0 0 0 2 3 0 0 0 (110) THR104 0 0 0 0 7 0 0 0 0 (111) ASN105 0 0 1 9 0 0 0 0 0 (175) GLN169 0 1 2 1 0 0 0 0 0 prot.sequence hhhhefmakrksdiilksvddlkdeidykdfeykeyfnllcelvpnnslekleinaideknmkneglvyvfviqgkifkighsitpitkRvQSynCgkveYrkngTCSTTNyfvlqsllkinkivqvyaffpeqptytlfgktyqdsfstskraenvilenfiknhnkkpigctQt >3oqg_AB: title=RESTRICTION ENDONUCLEASE HPY188I IN COMPLEX WITH SUBSTRATE DNA organism=HELICOBACTER PYLORI DNA sequence DG(D-4):DC(C4) DT(D-3):DA(C3) DT(D-2):DA(C2) DC(D-1):DG(C1) DA(D0):DT(C0) DG(D1):DC(C-1) DA(D2):DT(C-2) DT(D3):DA(C-3) DC(D4):DG(C-4) chainA ( 90) ARG84 0 0 0 3 0 0 0 0 0 ( 92) GLN86 10 5 0 0 0 0 0 0 0 ( 93) SER87 0 0 10 3 0 0 0 0 0 ( 96) CYS90 0 9 10 0 0 0 0 0 0 (101) TYR95 0 9 3 0 0 0 0 0 0 (106) THR100 0 0 6 0 0 0 0 0 0 (107) CYS101 0 0 1 0 0 0 0 0 0 (108) SER102 0 0 0 10 9 0 0 0 0 (109) THR103 0 0 0 0 2 3 0 0 0 (110) THR104 0 0 0 0 7 0 0 0 0 (111) ASN105 0 0 1 9 0 0 0 0 0 (175) GLN169 0 1 2 1 0 0 0 0 0 chainB ( 88) LYS83 0 0 0 0 0 0 0 1 0 ( 89) ARG84 0 0 0 0 0 3 0 0 0 ( 91) GLN86 0 0 0 0 0 0 0 10 9 ( 92) SER87 0 0 0 0 0 5 10 2 0 ( 95) CYS90 0 0 0 0 0 0 10 6 0 (100) TYR95 0 0 0 0 0 0 3 4 0 (105) THR100 0 0 0 0 0 0 6 0 0 (106) CYS101 0 0 0 0 0 0 2 0 0 (107) SER102 0 0 0 0 6 10 0 0 0 (108) THR103 0 0 0 3 0 0 0 0 0 (109) THR104 0 0 0 0 5 0 0 0 0 (110) ASN105 0 0 0 0 0 9 1 0 0 (174) GLN169 0 0 0 0 0 3 3 1 0 prot.sequence hhhhefmakrksdiilksvddlkdeidykdfeykeyfnllcelvpnnslekleinaideknmkneglvyvfviqgkifkighsitpitkRvQSynCgkveYrkngTCSTTNyfvlqsllkinkivqvyaffpeqptytlfgktyqdsfstskraenvilenfiknhnkkpigctQt/hhhefmakrksdiilksvddlkdeidykdfeykeyfnllcelvpnnslekleinaideknmkneglvyvfviqgkifkighsitpitKRvQSynCgkveYrkngTCSTTNyfvlqsllkinkivqvyaffpeqptytlfgktyqdsfstskraenvilenfiknhnkkpigctQt >3oqm_AC:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF CCPA-HPR-SER46P-ACKA2 COMPLEX organism=BACILLUS SUBTILIS DNA sequence DT(B700):DA(E715) DT(B701):DA(E714) DG(B702):DC(E713) DA(B703):DT(E712) DT(B704):DA(E711) DA(B705):DT(E710) DA(B706):DT(E709) DC(B707):DG(E708) DG(B708):DC(E707) DC(B709):DG(E706) DT(B710):DA(E705) DT(B711):DA(E704) DA(B712):DT(E703) DC(B713):DG(E702) DA(B714):DT(E701) DA(B715):DT(E700) chainA ( 15) SER16 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 17) ALA18 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 ( 20) SER21 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 21) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 8 21 0 ( 28) ASN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 ( 52) ALA53 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 6 12 0 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 chainC ( 5) ILE6 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 15) SER16 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET17 0 0 0 0 5 6 5 0 0 0 0 0 0 0 0 0 ( 17) ALA18 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER21 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 21) ARG22 0 16 9 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASN29 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA53 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 12 3 0 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 prot.sequence mnitiydvareanvSmAtvSRvvngnpNvkpttrkkvleaierlgyrpnavArgLAskktttvgviipdissifyselargiediatmykyniilsnsdqnmekelhllntmlgkqvdgivfmggnitdehvaefkrspvpivlaasveeqeetpsvaidyeqaiydavkllvdkghtdiafvsgpmaepinrskklqgykraleeanlpfneqfvaegdytydsglealqhlmsldkkptailsatdemalgiihaaqdqglsipedldiigfdntrlslmvrpqlstvvqptydigavamrlltklmnkepveehivelphrielrkstk/mnitIYdvareanvSMAtvSRvvngnpNvkpttrkkvleaierlgyrpnavArgLAskktttvgviipdissifyselargiediatmykyniilsnsdqnmekelhllntmlgkqvdgivfmggnitdehvaefkrspvpivlaasveeqeetpsvaidyeqaiydavkllvdkghtdiafvsgpmaepinrskklqgykraleeanlpfneqfvaegdytydsglealqhlmsldkkptailsatdemalgiihaaqdqglsipedldiigfdntrlslmvrpqlstvvqptydigavamrlltklmnkepveehivelphrielrkstk >3oqm_C:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF CCPA-HPR-SER46P-ACKA2 COMPLEX organism=BACILLUS SUBTILIS DNA sequence DT(B700):DA(E715) DT(B701):DA(E714) DG(B702):DC(E713) DA(B703):DT(E712) DT(B704):DA(E711) DA(B705):DT(E710) DA(B706):DT(E709) DC(B707):DG(E708) DG(B708):DC(E707) DC(B709):DG(E706) DT(B710):DA(E705) DT(B711):DA(E704) DA(B712):DT(E703) DC(B713):DG(E702) DA(B714):DT(E701) DA(B715):DT(E700) chainC ( 5) ILE6 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 15) SER16 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET17 0 0 0 0 5 6 5 0 0 0 0 0 0 0 0 0 ( 17) ALA18 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER21 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 21) ARG22 0 16 9 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASN29 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA53 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 12 3 0 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 prot.sequence mnitIYdvareanvSMAtvSRvvngnpNvkpttrkkvleaierlgyrpnavArgLAskktttvgviipdissifyselargiediatmykyniilsnsdqnmekelhllntmlgkqvdgivfmggnitdehvaefkrspvpivlaasveeqeetpsvaidyeqaiydavkllvdkghtdiafvsgpmaepinrskklqgykraleeanlpfneqfvaegdytydsglealqhlmsldkkptailsatdemalgiihaaqdqglsipedldiigfdntrlslmvrpqlstvvqptydigavamrlltklmnkepveehivelphrielrkstk >3oqn_A:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF CCPA-HPR-SER46-P-GNTR-DOWN CRE organism=BACILLUS SUBTILIS DNA sequence DT(E700):DA(B715) DT(E701):DA(B714) DG(E702):DC(B713) DA(E703):DT(B712) DA(E704):DT(B711) DA(E705):DT(B710) DG(E706):DC(B709) DC(E707):DG(B708) DG(E708):DC(B707) DG(E709):DC(B706) DT(E710):DA(B705) DA(E711):DT(B704) DC(E712):DG(B703) DC(E713):DG(B702) DA(E714):DT(B701) DT(E715):DA(B700) chainA ( 15) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 16) MET17 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 ( 17) ALA18 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 ( 20) SER21 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 21) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 2 9 23 0 ( 28) ASN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 ( 52) ALA53 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 8 13 0 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 prot.sequence mnitiydvareanvSMAtvSRvvngnpNvkpttrkkvleaierlgyrpnavArgLAskktttvgviipdissifyselargiediatmykyniilsnsdqnmekelhllntmlgkqvdgivfmggnitdehvaefkrspvpivlaasveeqeetpsvaidyeqaiydavkllvdkghtdiafvsgpmaepinrskklqgykraleeanlpfneqfvaegdytydsglealqhlmsldkkptailsatdemalgiihaaqdqglsipedldiigfdntrlslmvrpqlstvvqptydigavamrlltklmnkepveehivelphrielrkstk >3oqn_AC:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF CCPA-HPR-SER46-P-GNTR-DOWN CRE organism=BACILLUS SUBTILIS DNA sequence DT(E700):DA(B715) DT(E701):DA(B714) DG(E702):DC(B713) DA(E703):DT(B712) DA(E704):DT(B711) DA(E705):DT(B710) DG(E706):DC(B709) DC(E707):DG(B708) DG(E708):DC(B707) DG(E709):DC(B706) DT(E710):DA(B705) DA(E711):DT(B704) DC(E712):DG(B703) DC(E713):DG(B702) DA(E714):DT(B701) DT(E715):DA(B700) chainA ( 15) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 16) MET17 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 ( 17) ALA18 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 ( 20) SER21 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 21) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 2 9 23 0 ( 28) ASN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 ( 52) ALA53 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 8 13 0 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 chainC ( 5) ILE6 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 ( 15) SER16 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET17 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 ( 17) ALA18 0 0 2 4 2 0 0 0 0 0 0 0 0 0 0 0 ( 18) THR19 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER21 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 21) ARG22 0 17 10 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASN29 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA53 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 14 8 0 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 prot.sequence mnitiydvareanvSMAtvSRvvngnpNvkpttrkkvleaierlgyrpnavArgLAskktttvgviipdissifyselargiediatmykyniilsnsdqnmekelhllntmlgkqvdgivfmggnitdehvaefkrspvpivlaasveeqeetpsvaidyeqaiydavkllvdkghtdiafvsgpmaepinrskklqgykraleeanlpfneqfvaegdytydsglealqhlmsldkkptailsatdemalgiihaaqdqglsipedldiigfdntrlslmvrpqlstvvqptydigavamrlltklmnkepveehivelphrielrkstk/mnitIYdvareanvSMATvSRvvngnpNvkpttrkkvleaierlgyrpnavArgLAskktttvgviipdissifyselargiediatmykyniilsnsdqnmekelhllntmlgkqvdgivfmggnitdehvaefkrspvpivlaasveeqeetpsvaidyeqaiydavkllvdkghtdiafvsgpmaepinrskklqgykraleeanlpfneqfvaegdytydsglealqhlmsldkkptailsatdemalgiihaaqdqglsipedldiigfdntrlslmvrpqlstvvqptydigavamrlltklmnkepveehivelphrielrkstk >3oqo_AC:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CCPA-HPR-SER46P-SYN CRE organism=BACILLUS SUBTILIS DNA sequence DC(B700):DG(E715) DT(B701):DA(E714) DG(B702):DC(E713) DA(B703):DT(E712) DA(B704):DT(E711) DA(B705):DT(E710) DG(B706):DC(E709) DC(B707):DG(E708) DG(B708):DC(E707) DC(B709):DG(E706) DT(B710):DA(E705) DA(B711):DT(E704) DA(B712):DT(E703) DC(B713):DG(E702) DA(B714):DT(E701) DG(B715):DC(E700) chainA ( 5) ILE6 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 15) SER16 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 16) MET17 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 17) ALA18 0 0 0 0 0 0 0 0 0 0 0 2 4 2 0 0 ( 20) SER21 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 21) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 1 8 13 0 ( 28) ASN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 ( 52) ALA53 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 5 13 0 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 0 0 2 2 1 0 0 0 0 0 chainC ( 5) ILE6 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 15) SER16 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET17 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 ( 17) ALA18 0 0 3 3 1 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER21 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 21) ARG22 0 14 9 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASN29 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA53 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 12 4 0 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 prot.sequence mnitIydvareanvSMAtvSRvvngnpNvkpttrkkvleaierlgyrpnavArgLAskktttvgviipdissifyselargiediatmykyniilsnsdqnmekelhllntmlgkqvdgivfmggnitdehvaefkrspvpivlaasveeqeetpsvaidyeqaiydavkllvdkghtdiafvsgpmaepinrskklqgykraleeanlpfneqfvaegdytydsglealqhlmsldkkptailsatdemalgiihaaqdqglsipedldiigfdntrlslmvrpqlstvvqptydigavamrlltklmnkepveehivelphrielrkstka/mnitIydvareanvSMAtvSRvvngnpNvkpttrkkvleaierlgyrpnavArgLAskktttvgviipdissifyselargiediatmykyniilsnsdqnmekelhllntmlgkqvdgivfmggnitdehvaefkrspvpivlaasveeqeetpsvaidyeqaiydavkllvdkghtdiafvsgpmaepinrskklqgykraleeanlpfneqfvaegdytydsglealqhlmsldkkptailsatdemalgiihaaqdqglsipedldiigfdntrlslmvrpqlstvvqptydigavamrlltklmnkepveehivelphrielrkstk >3oqo_C:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=CCPA-HPR-SER46P-SYN CRE organism=BACILLUS SUBTILIS DNA sequence DC(B700):DG(E715) DT(B701):DA(E714) DG(B702):DC(E713) DA(B703):DT(E712) DA(B704):DT(E711) DA(B705):DT(E710) DG(B706):DC(E709) DC(B707):DG(E708) DG(B708):DC(E707) DC(B709):DG(E706) DT(B710):DA(E705) DA(B711):DT(E704) DA(B712):DT(E703) DC(B713):DG(E702) DA(B714):DT(E701) DG(B715):DC(E700) chainC ( 5) ILE6 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 15) SER16 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET17 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 ( 17) ALA18 0 0 3 3 1 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER21 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 21) ARG22 0 14 9 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASN29 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA53 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 55) LEU56 0 0 0 0 0 0 0 12 4 0 0 0 0 0 0 0 ( 56) ALA57 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 prot.sequence mnitIydvareanvSMAtvSRvvngnpNvkpttrkkvleaierlgyrpnavArgLAskktttvgviipdissifyselargiediatmykyniilsnsdqnmekelhllntmlgkqvdgivfmggnitdehvaefkrspvpivlaasveeqeetpsvaidyeqaiydavkllvdkghtdiafvsgpmaepinrskklqgykraleeanlpfneqfvaegdytydsglealqhlmsldkkptailsatdemalgiihaaqdqglsipedldiigfdntrlslmvrpqlstvvqptydigavamrlltklmnkepveehivelphrielrkstk >3or3_AB: title=RESTRICTION ENDONUCLEASE HPY188I IN COMPLEX WITH PRODUCT DNA organism=Helicobacter pylori DNA sequence DG(C-4):DC(F4) DA(C-3):DT(F3) DT(C-2):DA(F2) DC(C-1):DG(F1) DT(C0):DA(D0) DG(E1):DC(D-1) DA(E2):DT(D-2) DA(E3):DT(D-3) DC(E4):DG(D-4) chainA ( 87) ARG84 0 0 0 0 0 2 0 0 0 ( 89) GLN86 0 0 0 0 0 0 0 8 9 ( 90) SER87 0 0 0 0 0 2 10 0 0 ( 93) CYS90 0 0 0 0 0 0 11 9 0 ( 95) LYS92 0 0 0 0 0 0 0 1 0 ( 98) TYR95 0 0 0 0 0 0 3 9 0 (103) THR100 0 0 0 0 0 0 6 0 0 (104) CYS101 0 0 0 0 0 0 2 0 0 (105) SER102 0 0 0 0 9 10 0 0 0 (106) THR103 0 0 0 3 2 0 0 0 0 (107) THR104 0 0 0 0 7 0 0 0 0 (108) ASN105 0 0 0 0 0 8 1 0 0 chainB ( 86) LYS83 0 1 0 0 0 0 0 0 0 ( 87) ARG84 0 0 0 2 0 0 0 0 0 ( 89) GLN86 11 12 0 0 0 0 0 0 0 ( 90) SER87 0 1 10 4 0 0 0 0 0 ( 93) CYS90 0 6 11 0 0 0 0 0 0 ( 98) TYR95 0 4 4 0 0 0 0 0 0 (103) THR100 0 0 6 0 0 0 0 0 0 (104) CYS101 0 0 1 0 0 0 0 0 0 (105) SER102 0 0 0 10 6 0 0 0 0 (106) THR103 0 0 0 0 0 3 0 0 0 (107) THR104 0 0 0 0 5 0 0 0 0 (108) ASN105 0 0 1 9 0 0 0 0 0 (172) GLN169 0 0 0 1 0 0 0 0 0 prot.sequence hefmakrksdiilksvddlkdeidykdfeykeyfnllcelvpnnslekleinaideknmkneglvyvfviqgkifkighsitpitkRvQSynCgKveYrkngTCSTTNyfvlqsllkinkivqvyaffpeqptytlfgktyqdsfstskraenvilenfiknhnkkpigctqt/hefmakrksdiilksvddlkdeidykdfeykeyfnllcelvpnnslekleinaideknmkneglvyvfviqgkifkighsitpitKRvQSynCgkveYrkngTCSTTNyfvlqsllkinkivqvyaffpeqptytlfgktyqdsfstskraenvilenfiknhnkkpigctQt >3or3_B: title=RESTRICTION ENDONUCLEASE HPY188I IN COMPLEX WITH PRODUCT DNA organism=Helicobacter pylori DNA sequence DG(C-4):DC(F4) DA(C-3):DT(F3) DT(C-2):DA(F2) DC(C-1):DG(F1) DT(C0):DA(D0) DG(E1):DC(D-1) DA(E2):DT(D-2) DA(E3):DT(D-3) DC(E4):DG(D-4) chainB ( 86) LYS83 0 1 0 0 0 0 0 0 0 ( 87) ARG84 0 0 0 2 0 0 0 0 0 ( 89) GLN86 11 12 0 0 0 0 0 0 0 ( 90) SER87 0 1 10 4 0 0 0 0 0 ( 93) CYS90 0 6 11 0 0 0 0 0 0 ( 98) TYR95 0 4 4 0 0 0 0 0 0 (103) THR100 0 0 6 0 0 0 0 0 0 (104) CYS101 0 0 1 0 0 0 0 0 0 (105) SER102 0 0 0 10 6 0 0 0 0 (106) THR103 0 0 0 0 0 3 0 0 0 (107) THR104 0 0 0 0 5 0 0 0 0 (108) ASN105 0 0 1 9 0 0 0 0 0 (172) GLN169 0 0 0 1 0 0 0 0 0 prot.sequence hefmakrksdiilksvddlkdeidykdfeykeyfnllcelvpnnslekleinaideknmkneglvyvfviqgkifkighsitpitKRvQSynCgkveYrkngTCSTTNyfvlqsllkinkivqvyaffpeqptytlfgktyqdsfstskraenvilenfiknhnkkpigctQt >3orc_A:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF AN ENGINEERED CRO MONOMER BOUND NONSPECIFICALLY TO DNA organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DT(R1):DA(S8) DA(R2):DT(S7) DT(R3):DA(S6) DC(R4):DG(S5) DG(R5):DC(S4) DA(R6):DT(S3) DT(R7):DA(S2) DA(R8):DT(S1) chainA ( 64) SER65 0 0 0 0 0 1 1 0 ( 65) ASN66 0 0 0 0 7 5 0 0 prot.sequence eqritlkdyamrfgqtktakdlgvyqsainkaihagrkifltinadgsvyaeevkdgevkpfpSN >3os0_A:Ribonuclease_H-like; title=PFV STRAND TRANSFER COMPLEX (STC) AT 2.81 A RESOLUTION organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (103) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (105) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (206) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (212) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (213) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 5 13 10 3 (250) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence aeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptsh >3os1_A:Ribonuclease_H-like; title=PFV TARGET CAPTURE COMPLEX (TCC) AT 2.97 A RESOLUTION organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (103) ILE112 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ARG114 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) GLN215 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) GLU221 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) ARG222 5 8 13 6 0 0 0 0 0 0 0 0 0 0 0 0 (250) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptsh >3os2_A:Ribonuclease_H-like; title=PFV TARGET CAPTURE COMPLEX (TCC) AT 3.32 A RESOLUTION organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (103) ILE112 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ARG114 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) GLN215 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) GLU221 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) ARG222 4 11 14 6 0 0 0 0 0 0 0 0 0 0 0 0 (250) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (251) VAL260 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence aeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPVlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptsh >3osf_A:Homeodomain-like; title=THE STRUCTURE OF PROTOZOAN PARASITE TRICHOMONAS VAGINALIS MYB2 IN COMPLEX WITH MRE-2F-13 DNA organism=TRICHOMONAS VAGINALIS DNA sequence DC(C1):DG(B13) DA(C2):DT(B12) DA(C3):DT(B11) DG(C4):DC(B10) DA(C5):DT(B9) DC(C6):DG(B8) DG(C7):DC(B7) DA(C8):DT(B6) DT(C9):DA(B5) DA(C10):DT(B4) DC(C11):DG(B3) DA(C12):DT(B2) DG(C13):DC(B1) chainA ( 2) LYS49 0 0 0 0 0 0 1 6 5 1 0 0 0 ( 37) ARG84 0 0 0 0 8 13 13 0 0 0 0 0 0 ( 40) ARG87 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 41) ASP88 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 46) TYR93 0 0 0 0 0 0 0 2 3 0 0 0 0 ( 87) ASP134 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 88) ILE135 0 0 0 0 0 0 1 5 0 0 0 0 0 ( 91) LYS138 0 0 0 0 0 6 12 4 0 0 0 0 0 ( 92) ASN139 0 0 0 0 0 0 0 0 10 2 0 0 0 ( 95) VAL142 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 96) THR143 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence kKqKftpeedemlkravaqhgsdwkmiaatfpnrnaRqcRDrwknYlapsishtpwtaeedallvqkiqeygrqwaiiakffpgrtDIhiKNrwVTisnklgi >3osg_A:Homeodomain-like; title=THE STRUCTURE OF PROTOZOAN PARASITE TRICHOMONAS VAGINALIS MYB2 IN COMPLEX WITH MRE-1-12 DNA organism=TRICHOMONAS VAGINALIS DNA sequence DA(B1):DT(C12) DA(B2):DT(C11) DA(B3):DT(C10) DT(B4):DA(C9) DA(B5):DT(C8) DT(B6):DA(C7) DC(B7):DG(C6) DG(B8):DC(C5) DT(B9):DA(C4) DT(B10):DA(C3) DA(B11):DT(C2) DT(B12):DA(C1) chainA ( 9) LYS49 0 0 0 1 6 5 2 0 0 0 0 0 ( 44) ARG84 0 0 0 0 0 0 14 14 7 0 0 0 ( 47) ARG87 0 0 0 0 0 0 0 0 0 0 1 0 ( 48) ASP88 0 0 0 0 0 0 1 0 0 0 0 0 ( 53) TYR93 0 0 0 0 3 3 0 0 0 0 0 0 ( 95) ILE135 0 0 0 0 0 4 1 0 0 0 0 0 ( 98) LYS138 0 0 0 0 0 3 10 4 0 0 0 0 ( 99) ASN139 0 0 0 4 10 1 0 0 0 0 0 0 (102) VAL142 0 0 0 3 0 0 0 0 0 0 0 0 prot.sequence vqvnkaakKqkftpeedemlkravaqhgsdwkmiaatfpnrnaRqcRDrwknYlapsishtpwtaeedallvqkiqeygrqwaiiakffpgrtdIhiKNrwVtisnklgi >3osn_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURAL BASIS FOR PROFICIENT INCORPORATION OF DTTP OPPOSITE O6- METHYLGUANINE BY HUMAN DNA POLYMERASE IOTA organism=HOMO SAPIENS DNA sequence DG(C842):DC(B12) DG(C843):DC(B11) DT(C844):DA(B10) DC(C845):DG(B9) DC(C846):DG(B8) DT(C847):DA(B7) chainA (281) GLU305 3 0 0 0 0 0 (319) ARG343 0 0 0 0 0 2 (337) GLN361 0 0 0 0 0 2 prot.sequence assrvivhvdldcfYaqvemisnpelkdkplgvqQkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssekhygresrQcpipshviqkydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >3osp_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF REV1 organism=Saccharomyces cerevisiae DNA sequence DA(P1):DT(T16) DT(P2):DA(T15) DC(P3):DG(T14) DC(P4):DG(T13) DT(P5):DA(T12) DC(P6):DG(T11) DC(P7):DG(T10) DC(P8):DG(T9) DC(P9):DG(T8) DT(P10):DA(T7) DA(P11):DT(T6) chainA ( 25) SER329 0 0 0 0 0 0 0 0 0 0 1 (316) ASP626 0 0 0 0 0 0 0 0 0 0 9 prot.sequence krivacddpdfltsyfahsrlhhlSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdtlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfsrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdv >3oy9_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MANGANESE AT 2.55 RESOLUTION organism=Human spumaretrovirus DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 11 12 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oya_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND RALTEGRAVIR AT 2.65 RESOLUTION organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 9 12 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oyb_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI MK2048 organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 13 10 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oyc_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI PICA organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 8 13 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oyd_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI GS9160 organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 10 13 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oye_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI COMPOUND2 organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 14 11 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oyf_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI L-870,810 organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 7 13 10 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oyg_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI COMPOUND1 (COMPOUNDG) organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 14 9 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oyh_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI MK0536 organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 9 13 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oyi_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PFV S217Q MUTANT INTASOME IN COMPLEX WITH MANGANESE organism=Human spumaretrovirus DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 12 7 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQsqgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oyj_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PFV S217Q MUTANT INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI MK2048 organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 13 8 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQsqgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oyk_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PFV S217H MUTANT INTASOME BOUND TO MANGANESE organism=Human spumaretrovirus DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 12 8 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQshgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oyl_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PFV S217H MUTANT INTASOME BOUND TO MAGNESIUM AND THE INSTI MK2048 organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 9 14 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQshgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oym_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PFV N224H MUTANT INTASOME BOUND TO MANGANESE organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 12 8 4 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERkhsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3oyn_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PFV N224H MUTANT INTASOME BOUND TO MAGNESIUM AND THE INSTI MK2048 organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 12 9 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERkhsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3p57_AB:SRF-like; title=CRYSTAL STRUCTURE OF THE P300 TAZ2 DOMAIN BOUND TO MEF2 ON DNA organism=HOMO SAPIENS DNA sequence DA(E2):DT(F15) DA(E3):DT(F14) DC(E4):DG(F13) DT(E5):DA(F12) DA(E6):DT(F11) DT(E7):DA(F10) DT(E8):DA(F9) DT(E9):DA(F8) DA(E10):DT(F7) DT(E11):DA(F6) DA(E12):DT(F5) DA(E13):DT(F4) DG(E14):DC(F3) DA(E15):DT(F2) chainA ( 2) ARG3 0 0 0 0 0 0 0 0 0 8 14 2 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 7 1 0 0 chainB ( 2) ARG3 0 0 7 13 6 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 2 7 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk/gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk >3p57_CD:SRF-like; title=CRYSTAL STRUCTURE OF THE P300 TAZ2 DOMAIN BOUND TO MEF2 ON DNA organism=HOMO SAPIENS DNA sequence DA(G2):DT(H15) DA(G3):DT(H14) DC(G4):DG(H13) DT(G5):DA(H12) DA(G6):DT(H11) DT(G7):DA(H10) DT(G8):DA(H9) DT(G9):DA(H8) DA(G10):DT(H7) DT(G11):DA(H6) DA(G12):DT(H5) DA(G13):DT(H4) DG(G14):DC(H3) DA(G15):DT(H2) chainC ( 2) ARG3 0 0 14 13 9 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 1 6 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG3 0 0 0 0 0 0 0 0 0 8 11 7 0 0 ( 14) ARG15 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 5 5 1 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk/gRkkiqitrimdeRnrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk >3p57_I:SRF-like; title=CRYSTAL STRUCTURE OF THE P300 TAZ2 DOMAIN BOUND TO MEF2 ON DNA organism=? DNA sequence DT(L2):DA(K15) DC(L3):DG(K14) DT(L4):DA(K13) DT(L5):DA(K12) DA(L6):DT(K11) DT(L7):DA(K10) DA(L8):DT(K9) DA(L9):DT(K8) DA(L10):DT(K7) DT(L11):DA(K6) DA(L12):DT(K5) DG(L13):DC(K4) DT(L14):DA(K3) DT(L15):DA(K2) chainI ( 2) ARG3 0 0 0 0 0 0 0 0 0 6 16 10 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 5 3 1 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk >3p57_IJ:SRF-like; title=CRYSTAL STRUCTURE OF THE P300 TAZ2 DOMAIN BOUND TO MEF2 ON DNA organism=HOMO SAPIENS DNA sequence DA(K2):DT(L15) DA(K3):DT(L14) DC(K4):DG(L13) DT(K5):DA(L12) DA(K6):DT(L11) DT(K7):DA(L10) DT(K8):DA(L9) DT(K9):DA(L8) DA(K10):DT(L7) DT(K11):DA(L6) DA(K12):DT(L5) DA(K13):DT(L4) DG(K14):DC(L3) DA(K15):DT(L2) chainI ( 2) ARG3 0 0 10 16 6 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 1 3 5 0 0 0 0 0 0 0 0 0 0 chainJ ( 2) ARG3 0 0 0 0 0 0 0 0 0 3 13 4 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 6 2 0 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk/gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk >3pih_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=T. MARITIMA UVRA IN COMPLEX WITH FLUORESCEIN-MODIFIED DNA organism=Thermotoga maritima DNA sequence DA(D1) DG(D2) DT(D3) DG(D4) DA(D5) DT(D6) DC(D7) DA(D8) DG(D9) DT(D10) DG(D11) DG(D12) DT(D13) DT(D14) DC(D15) DC(D16) DG(D17) DG(D18) DA(D19) DA(D20) DC(D21) DC(D22) DA(D23) DC(D24) DT(D25) DG(D26) DA(D27) DT(D28) DC(D29) DA(D30) DC(D31) DT(D32) chainA (602) LYS682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence neivvkgarvhnlknitvripknrlvvitgvsgsgksslamdtiyaegqrryleslstykkpdvdeieglspaiaidqktshnprstvgtvteiydylrvlyarigkahcpecgrplekksideilqdlfnsfkegsriyilaplvvdrliletrnehrildslelamregkgfveirnvdtgeskifsenlmcpvcgigfpeitpklfsfnspygacpnchglgftfevdpslvaiipyrwdrrlsrwvareiekrgvsppedvkefilygdfegvvpkvqrwhretemkewleknfivqrtcsvcggrrlnrealsvkinglniheftelsiseeleflknlnlterereivgellkeiekrleflvdvgleyltlsrsattlsggesqrirlatqigsgltgviyvldeptiglhprdterliktlkklrdlgntvivvehdeevirnadhiidigpgggtnggrvvfqgtvdellknpdssltgeylsgkrkitvnktrrlpyaslkikgvrhnnlknidveiplgvfvcvtgvsgsgksslvmetlypalmnllhktklpagefdsieghenidkmiaidqspigrtprsnpatytKvfdeirslfamtpaakargynksrfsfnlkggrceacqgqgyvkiemlflpdvyvecdvckgkrynretleitykgknisdildmtvdealeffknipsikrtlqvlhdvglgyvklgqpattlsggeaqriklaselrkrdtgrtlyildeptvglhfedvrklvevlhrlvdrgntviviehnldviknadhiidlgpeggkeggyivatgtpeeiaknphsytgrflknvl >3pky_A:PLP-dependent_transferases; title=POLYMERASE DOMAIN FROM MYCOBACTERIUM TUBERCULOSIS LIGASE D IN COMPLEX WITH DNA, UTP AND MANGANESE. organism=Mycobacterium tuberculosis DNA sequence DC(D2):DG(C4) DC(D3):DG(C3) DG(D4):DC(C2) DC(D5):DG(C1) chainA ( 48) ARG53 0 0 0 11 ( 50) PRO55 0 0 0 11 ( 58) PHE63 0 0 0 49 prot.sequence eqrvtltnadkvlypatgttksdifdyyagvaevmlghiagrpatrkRwPngvdqpaFfekqlalsappwlsratvahrsgtttypiidsatglawiaqqaalevhvpqwrfvaepgsgelnpgpatrlvfdldpgegvmmaqlaevaravrdlladiglvtfpvtsgskglhlytpldepvssrgatvlakrvaqrleqampalvtstmtkslragkvfvdwsqnsgskttiapyslrgrthptvaaprtwaelddpalrqlsydevltriardgdllerldadap >3pky_AB:PLP-dependent_transferases; title=POLYMERASE DOMAIN FROM MYCOBACTERIUM TUBERCULOSIS LIGASE D IN COMPLEX WITH DNA, UTP AND MANGANESE. organism=Mycobacterium tuberculosis DNA sequence DG(C1):DC(D5) DC(C2):DG(D4) DG(C3):DC(D3) DG(C4):DC(D2) chainA ( 48) ARG53 11 0 0 0 ( 50) PRO55 11 0 0 0 ( 58) PHE63 49 0 0 0 chainB ( 47) ARG53 0 0 10 0 ( 49) PRO55 0 0 9 0 ( 57) PHE63 0 0 47 0 ( 58) PHE64 0 0 0 41 ( 59) GLU65 0 0 1 0 ( 60) LYS66 0 0 0 5 (230) THR236 0 0 0 1 prot.sequence eqrvtltnadkvlypatgttksdifdyyagvaevmlghiagrpatrkRwPngvdqpaFfekqlalsappwlsratvahrsgtttypiidsatglawiaqqaalevhvpqwrfvaepgsgelnpgpatrlvfdldpgegvmmaqlaevaravrdlladiglvtfpvtsgskglhlytpldepvssrgatvlakrvaqrleqampalvtstmtkslragkvfvdwsqnsgskttiapyslrgrthptvaaprtwaelddpalrqlsydevltriardgdllerldadap/qrvtltnadkvlypatgttksdifdyyagvaevmlghiagrpatrkRwPngvdqpaFFEKqlalsappwlsratvahrsgtttypiidsatglawiaqqaalevhvpqwrfvaepgsgelnpgpatrlvfdldpgegvmmaqlaevaravrdlladiglvtfpvtsgskglhlytpldepvssrgatvlakrvaqrleqampalvtstmtkslragkvfvdwsqnsgskTtiapyslrgrthptvaaprtwaelddpalrqlsydevltriardgdllerldadap >3pmn_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY CRYSTAL STRUCTURE OF POLYMERASE LAMBDA VARIANT WITH A GT MISPAIR AT THE PRIMER TERMINUS WITH MN2+ IN THE ACTIVE SITE organism=HOMO SAPIENS DNA sequence DT(B6):DG(C6) DT(B7):DA(C5) DA(B8):DT(C4) DC(B9):DG(C3) DT(B10):DA(C2) DG(B11):DC(C1) chainA (252) TYR505 12 0 0 0 0 0 (264) ARG517 3 0 0 0 0 0 (276) GLU529 3 0 0 0 0 0 prot.sequence atnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetKylgvcrlpgpgrrhrrldiivvpysefacallYftgsahfnrsmRalaktkgmslsEhalstavpgrvlptptekdvfrllglpyrepaerdw >3pnc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY CRYSTAL STRUCTURE OF A POLYMERASE LAMBDA VARIANT WITH A GT MISPAIR AT THE PRIMER TERMINUS AND SODIUM AT CATALYTIC METAL SITE organism=Homo sapiens DNA sequence DT(C6):DG(B6) DT(C7):DA(B5) DA(C8):DT(B4) DC(C9):DG(B3) DT(C10):DA(B2) DG(C11):DC(B1) chainA (218) LYS472 0 2 1 0 0 0 (251) TYR505 12 0 0 0 0 0 (263) ARG517 3 0 0 0 0 0 (275) GLU529 2 0 0 0 0 0 prot.sequence tnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetKylgvcrlpgpgrrhrrldiivvpysefacallYftgsahfnrsmRalaktkgmslsEhalstavvrkvgpgrvlptptekdvfrllglpyrepaerdw >3po2_AB: title=ARRESTED RNA POLYMERASE II ELONGATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N0):DG(T18) DA(N1):DT(T17) DG(N2):DC(T16) DG(N3):DC(T15) DT(N4):DA(T14) DA(N5):DT(T13) DA(N6):DT(T12) DG(N7):DC(T11) DC(N8):DG(T10) DT(N9):DA(T9) DA(N10):DT(T8) DG(N11):DC(T7) DC(N12):DG(T6) DT(N13):DA(T5) chainA (821) THR831 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (822) ALA832 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (1353) ARG1386 0 0 0 8 0 0 0 0 0 0 0 0 0 0 chainB (331) ARG398 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ASP399 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) LYS404 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (425) THR500 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (427) ILE502 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (430) ASP505 0 29 0 0 0 0 0 0 0 0 0 0 0 0 (432) LYS507 0 12 0 0 0 0 0 0 0 0 0 0 0 0 (435) LYS510 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (436) PRO511 11 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvraeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkym/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddRDhfgkKrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtnTpIgrDgKlaKPrqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3po2_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ARRESTED RNA POLYMERASE II ELONGATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N0):DG(T18) DA(N1):DT(T17) DG(N2):DC(T16) DG(N3):DC(T15) DT(N4):DA(T14) DA(N5):DT(T13) DA(N6):DT(T12) DG(N7):DC(T11) DC(N8):DG(T10) DT(N9):DA(T9) DA(N10):DT(T8) DG(N11):DC(T7) DC(N12):DG(T6) DT(N13):DA(T5) chainB (331) ARG398 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ASP399 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) LYS404 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (425) THR500 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (427) ILE502 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (430) ASP505 0 29 0 0 0 0 0 0 0 0 0 0 0 0 (432) LYS507 0 12 0 0 0 0 0 0 0 0 0 0 0 0 (435) LYS510 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (436) PRO511 11 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddRDhfgkKrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtnTpIgrDgKlaKPrqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3po3_AB:Elongation_factor_TFIIS_domain_2;Zinc_beta-ribbon; title=ARRESTED RNA POLYMERASE II REACTIVATION INTERMEDIATE organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(N2):DC(T16) DG(N3):DC(T15) DT(N4):DA(T14) DA(N5):DT(T13) DA(N6):DT(T12) DG(N7):DC(T11) DC(N8):DG(T10) chainA (1357) ARG1386 0 4 0 0 0 0 0 chainB prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3po4_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF A MUTANT OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN COMPLEX WITH A BLUNT-ENDED DNA AND DDATP organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (246) LYS540 0 0 0 0 0 0 0 4 5 0 0 (279) ARG573 0 0 0 0 0 0 0 0 0 0 4 (286) ASN580 0 0 0 0 0 0 0 0 0 1 0 (289) ASN583 0 0 0 0 0 0 0 0 1 11 1 (293) ARG587 0 0 0 0 0 0 0 0 0 0 6 (490) HIS784 0 0 0 0 0 0 0 0 0 0 1 prot.sequence eeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvRtplgqrirrafiaeegwllvaldysqkelrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaerkafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3po5_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF A MUTANT OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AUQATICUS IN COMPLEX WITH AN ABASIC SITE AND DDATP organism=Thermus aquaticus DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (246) LYS540 0 0 5 4 0 0 0 0 0 0 0 (251) TYR545 0 1 0 0 0 0 0 0 0 0 0 (279) ARG573 4 0 0 0 0 0 0 0 0 0 0 (286) ASN580 0 1 0 0 0 0 0 0 0 0 0 (289) ASN583 1 11 1 0 0 0 0 0 0 0 0 (293) ARG587 5 0 0 0 0 0 0 0 0 0 0 (450) GLN754 1 0 0 0 0 0 0 0 0 0 0 (480) HIS784 1 0 0 0 0 0 0 0 0 0 0 prot.sequence eeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvRtplgqrirrafiaeegwllvaldysqkelrvlahlsgdenlirvfqegrdihtetaswplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaerkafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3pov_A:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF A SOX-DNA COMPLEX organism=Human herpesvirus 8 type M DNA sequence DG(C2):DC(D39) DG(C3):DC(D38) DG(C4):DC(D37) DA(C5):DT(D36) DT(C6):DA(D35) DC(C7):DG(D34) DC(C8):DG(D33) DT(C9):DA(D32) DC(C10):DG(D31) DC(C11):DG(D30) DC(C12):DA(D29) DA(C13):DT(D28) DG(C14):DC(D27) DT(C15):DA(D26) DC(C16):DG(D25) DG(C17):DC(D24) DA(C18):DT(D23) DC(C19):DG(D22) DC(C20):DG(D21) chainA (259) LYS286 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ARG319 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence tptpadlfsedylvdtldgltvddqqavlaslsfskflkhakvrdwcaqakiqpsmpalrmaynyflfskvgefigsedvcnffvdrvfggvrlldvasvyaacsqmnahqrhhicclveratssqslnpvwdalrdgiissskfhwavkqqkifspafglrceevvktllatllhpdetncldygfmqspqngifgvsldfaanvktfdpnckvyeikcrfkytfakmecdpiyaayqrlyeapgklalkdffysisKpaveyvglgklpsesdylvaydqeweacprkkRkltplhnlirecilhnsttesdvyvltdpqdtrgqisikarfkanlfvnvrhsyfyqvllqssiveeyigspkyyiatgffrkrgyqdpvnctiggdaldphveiptllivtpvyfprgakhrllhqaanfwsrsakdtfpyikwdfsylsan >3pr4_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 Y12A MUTANT INCORPORATING DADP OPPOSITE TEMPLATE DT organism=Sulfolobus solfataricus DNA sequence DT(T4):ATP(A342) DG(T5):DC(P13) DA(T6):DT(P12) DG(T7):DC(P11) DT(T8):DA(P10) DC(T9):DG(P9) DC(T10):DG(P8) DT(T11):DA(P7) DT(T12):DA(P6) DC(T13):DG(P5) DC(T14):DG(P4) DC(T15):DG(P3) DC(T16):DG(P2) DC(T17):DG(P1) chainA ( 7) ASP7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) TYR10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) PHE11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL32 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA44 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR45 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) TYR48 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG51 11 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) MET76 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP105 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) LYS159 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) SER244 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (332) ARG332 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 0 4 1 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfaaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >3pr5_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 Y12A MUTANT INCORPORATING ADP OPPOSITE TEMPLATE DT organism=Sulfolobus solfataricus DNA sequence DT(T4):ATP(B344) DG(T5):DC(P13) DA(T6):DT(P12) DG(T7):DC(P11) DT(T8):DA(P10) DC(T9):DG(P9) DC(T10):DG(P8) DT(T11):DA(P7) DT(T12):DA(P6) DC(T13):DG(P5) DC(T14):DG(P4) DC(T15):DG(P3) DC(T16):DG(P2) DC(T17):DG(P1) chainB ( 7) ASP7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) TYR10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) PHE11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL32 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA44 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR45 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) TYR48 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG51 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA57 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP105 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) LYS159 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) SER244 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (332) ARG332 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfaaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeaKakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >3pt6_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF MOUSE DNMT1(650-1602) IN COMPLEX WITH DNA organism=Mus musculus DNA sequence DC(D2):DG(J37) DC(D3):DG(J36) DC(D4):DG(J35) DG(D5):DC(J34) DT(D6):DA(J33) DG(D7):DC(J32) DA(D8):DT(J31) DG(D9):DC(J30) DC(D10):DG(J29) DC(D11):DG(J28) DT(D12):DA(J27) DC(D13):DG(J26) DC(D14):DG(J25) DG(D15):DC(J24) DC(D16):DG(J23) DA(D17):DT(J22) DG(D18):DC(J21) DG(D19):DC(J20) chainB ( 37) LYS686 0 0 0 0 0 0 0 0 0 0 0 14 11 7 0 0 0 0 ( 38) GLN687 0 0 0 0 0 0 0 0 0 0 0 0 7 7 3 0 0 0 (556) ARG1241 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence amkrrrcgvcevcqqpecgkckackdmvkfggtgrsKQaclkrrcpnlavkeadddeeadddvsempspkklhqgkkkkqnkdriswlgqpmkieenrtyyqkvsideemlevgdcvsvipddsskplylarvtalwedkngqmmfhahwfcagtdtvlgatsdplelflvgecenmqlsyihskvkviykapsenwameggdgktyffqlwynqeyarfesppktqptednkhkfclscirlaelrqkempkvleqieevdgrvycssitkngvvyrlgdsvylppeaftfnikvaspvkrpkkdpvnetlypehyrkysdyikgsnldapepyrigrikeihcgkkkgkvneadiklrlykfyrpenthrsyngsyhtdinmlywsdeeavvnfsdvqgrctveygedllesiqdysqggpdrfyfleaynsktknfedppnharspgnkklpklrtldvfsgcgglsegfhqagisetlwaiemwdpaaqafrlnnpgttvftedcnvllklvmagevtnslgqrlpqkgdvemlcggppcqgfsgmnrfnsRtyskfknslvvsflsycdyyrprffllenvrnfvsyrrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapracqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpeiqngasnseipyngeplswfqrqlrgshyqpilrdhickdmsplvaarmrhiplfpgsdwrdlpniqvrlgdgviahklqytfhdvkngysstgalrgvcscaegkacdpesrqfstlipwclphtgnrhnhwaglygrlewdgffsttvtnpepmgkqgrvlhpeqhrvvsvrecarsqgfpdsyrffgnildrhrqvgnavppplakaigleiklclls >3pta_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF HUMAN DNMT1(646-1600) IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(C20):DG(B19) DC(C21):DG(B18) DT(C22):DA(B17) DG(C23):DC(B16) DC(C24):DG(B15) DG(C25):DC(B14) DG(C26):DC(B13) DA(C27):DT(B12) DG(C28):DC(B11) DG(C29):DC(B10) DC(C30):DG(B9) DT(C31):DA(B8) DC(C32):DG(B7) DA(C33):DT(B6) DC(C34):DG(B5) DG(C35):DC(B4) DG(C36):DC(B3) DG(C37):DC(B2) DA(C38):DT(B1) chainA ( 36) SER682 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS683 0 0 0 0 2 13 17 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN684 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence afkrrrcgvcevcqqpecgkckackdmvkfggsgrSKQacqerrcpnmamkeadddeevddnipempspkkmhqgkkkkqnknriswvgeavktdgkksyykkvcidaetlevgdcvsvipddsskplylarvtalwedssngqmfhahwfcagtdtvlgatsdplelflvdecedmqlsyihskvkviykapsenwameggmdpgktyfyqlwydqdyarfesppktqptednkfkfcvscarlaemrqkeiprvleqledldsrvlyysatkngilyrvgdgvylppeaftfniklsspkepvdedlypehyrkysnldapepyrigrikeifcpkksngrpnetdikirvnkfyrpenthkstpasyhadinllywsdeeavvdfkavqgrctveygedlpecvqvysmggpnrfyfleaynaksksfedppnharspgklpklrtldvfsgcgglsegfhqagisdtlwaiemwdpaaqafrlnnpgstvftedcnillklvmagettnsrgqrlpqkgdvemlcggppcqgfsgmnrfnsrtyskfknslvvsflsycdyyrprffllenvrnfvsfkrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapracqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpevrngasaleisyngepqswfqrqlrgaqyqpilrdhickdmsalvaarmrhiplapgsdwrdlpnievrlsdgtmarklrythhdrkngrsssgalrgvcscvacdpaarqfntlipwclphtgnrhnhwaglygrlewdgffsttvtnpepmgkqgrvlhpeqhrvvsvrecarsqgfpdtyrlfgnildkhrqvgnavppplakaigleiklcmlaka >3pv8_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DNA AND DDTTP-DA IN CLOSED CONFORMATION organism=Geobacillus kaustophilus DNA sequence DG(C5):DC(B28) DA(C6):DT(B27) DG(C7):DC(B26) DT(C8):DA(B25) DC(C9):DG(B24) DA(C10):DT(B23) DG(C11):DC(B22) DG(C12):DC(B21) chainA (285) LYS582 0 0 7 5 0 0 0 0 (318) ARG615 4 0 0 0 0 0 0 0 (328) ASN625 1 4 3 0 0 0 0 0 (500) GLN797 1 0 0 0 0 0 0 0 (532) HIS829 2 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3pvi_AB:Restriction_endonuclease-like; title=D34G MUTANT OF PVUII ENDONUCLEASE COMPLEXED WITH COGNATE DNA SHOWS THAT ASP34 IS DIRECTLY INVOLVED IN DNA RECOGNITION AND INDIRECTLY INVOLVED IN CATALYSIS organism=Proteus vulgaris DNA sequence DG(D3):DC(C14) DA(D4):DT(C13) DC(D5):DG(C12) DC(D6):DG(C11) DA(D7):DT(C10) DG(D8):DC(C9) DC(D9):DG(C8) DT(D10):DA(C7) DG(D11):DC(C6) DG(D12):DC(C5) DT(D13):DA(C4) DC(D14):DG(C3) chainA ( 80) SER81 0 0 0 0 0 0 0 8 2 0 0 0 ( 83) HIS84 0 0 0 0 0 0 11 25 0 0 0 0 (139) ASN140 0 0 0 0 0 0 0 10 12 0 0 0 (140) ASN141 0 0 0 0 0 0 0 18 8 0 0 0 (142) LYS143 0 0 0 0 0 0 0 0 7 1 0 0 chainB ( 80) SER81 0 0 0 2 7 0 0 0 0 0 0 0 ( 83) HIS84 0 0 0 0 21 11 0 0 0 0 0 0 (139) ASN140 0 0 0 13 10 0 0 0 0 0 0 0 (140) ASN141 0 0 0 7 18 0 0 0 0 0 0 0 (142) LYS143 0 0 7 7 0 0 0 0 0 0 0 0 prot.sequence shpdlnkllelwphiqeyqdlalkhgindifqgnggkllqvllitgltvlpgregndavdnagqeyelksinidltkgfSthHhmnpviiakyrqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy/shpdlnkllelwphiqeyqdlalkhgindifQgnggkllqvllitgltvlpgregndavdnagqeyelksinidltkgfSthHhmnpviiakyrqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy >3pvi_B:Restriction_endonuclease-like; title=D34G MUTANT OF PVUII ENDONUCLEASE COMPLEXED WITH COGNATE DNA SHOWS THAT ASP34 IS DIRECTLY INVOLVED IN DNA RECOGNITION AND INDIRECTLY INVOLVED IN CATALYSIS organism=Proteus vulgaris DNA sequence DG(C3):DC(D14) DA(C4):DT(D13) DC(C5):DG(D12) DC(C6):DG(D11) DA(C7):DT(D10) DG(C8):DC(D9) DC(C9):DG(D8) DT(C10):DA(D7) DG(C11):DC(D6) DG(C12):DC(D5) DT(C13):DA(D4) DC(C14):DG(D3) chainB ( 80) SER81 0 0 0 0 0 0 0 7 2 0 0 0 ( 83) HIS84 0 0 0 0 0 0 11 21 0 0 0 0 (139) ASN140 0 0 0 0 0 0 0 10 13 0 0 0 (140) ASN141 0 0 0 0 0 0 0 18 7 0 0 0 (142) LYS143 0 0 0 0 0 0 0 0 7 7 0 0 prot.sequence shpdlnkllelwphiqeyqdlalkhgindifQgnggkllqvllitgltvlpgregndavdnagqeyelksinidltkgfSthHhmnpviiakyrqvpwifaiyrgiaieaiyrlepkdlefyydkwerkwysdghkdiNNpKipvkyvmehgtkiy >3pvp_B:TrpR-like; title=STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS DNAA-DBD IN COMPLEX WITH BOX2 DNA organism=Mycobacterium tuberculosis DNA sequence DC(E101):DG(F213) DG(E102):DC(F212) DT(E103):DA(F211) DT(E104):DA(F210) DA(E105):DT(F209) DT(E106):DA(F208) DC(E107):DG(F207) DC(E108):DG(F206) DA(E109):DT(F205) DC(E110):DG(F204) DA(E111):DT(F203) DA(E112):DT(F202) DC(E113):DG(F201) chainB ( 26) LYS436 0 0 8 4 1 0 0 0 0 0 0 0 0 ( 50) PRO460 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 59) ASP469 0 0 0 0 0 0 2 5 0 0 0 0 0 ( 60) HIS470 0 0 0 0 0 0 0 0 0 11 13 0 0 ( 61) THR471 0 0 0 0 0 0 4 5 7 3 0 0 0 ( 62) THR472 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 64) MET474 0 0 0 0 0 0 0 0 2 3 0 0 0 ( 65) TYR475 0 0 0 0 7 7 0 0 0 0 0 0 0 prot.sequence isaatimaataeyfdttveelrgpgKtralaqsrqiamylcreltdlslPkigqafgrDHTTvMYaqrkilsemaerrevfdhvkelttrirqrs >3pvv_B:TrpR-like; title=STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS DNAA-DBD IN COMPLEX WITH BOX1 DNA organism=Mycobacterium tuberculosis DNA sequence DG(F201):DC(E113) DT(F202):DA(E112) DT(F203):DA(E111) DG(F204):DC(E110) DT(F205):DA(E109) DG(F206):DC(E108) DG(F207):DC(E107) DA(F208):DT(E106) DC(F209):DG(E105) DA(F210):DT(E104) DA(F211):DT(E103) DC(F212):DG(E102) DG(F213):DC(E101) chainB ( 26) LYS436 0 0 0 0 0 0 0 0 3 5 7 0 0 ( 50) PRO460 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 59) ASP469 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 60) HIS470 0 0 15 11 0 0 0 0 0 0 0 0 0 ( 61) THR471 0 0 0 3 6 5 3 0 0 0 0 0 0 ( 64) MET474 0 0 0 4 2 0 0 0 0 0 0 0 0 ( 65) TYR475 0 0 0 0 0 0 0 6 7 0 0 0 0 prot.sequence isaatimaataeyfdttveelrgpgKtralaqsrqiamylcreltdlslPkigqafgrDHTtvMYaqrkilsemaerrevfdhvkelttrirqrs >3pvx_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=BINARY COMPLEX OF AFLATOXIN B1 ADDUCT MODIFIED DNA (AFB1-FAPY) WITH DNA POLYMERASE IV organism=Sulfolobus solfataricus DNA sequence DG(C347):DC(B386) DG(C348):DC(B385) DG(C349):DC(B384) DG(C350):DC(B383) DG(C351):DC(B382) DA(C352):DT(B381) DA(C353):DT(B380) DG(C354):DC(B379) DG(C355):DC(B378) DA(C356):DT(B377) DT(C357):DA(B376) DT(C358):DA(B375) DC(C359):DT(B373) chainA ( 12) TYR12 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 44) ALA44 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 76) MET76 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 78) LYS78 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence mivlfvdfdyfYaqveevlnpslkgkpvvvcVfsgrfedsgavAtanyearkfgvkagipiveakkilpnavylpMrKevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3pw0_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF AFLATOXIN B1 ADDUCT MODIFIED DNA (AFB1-FAPY) WITH DNA POLYMERASE IV AND INCOMING DATP organism=Sulfolobus solfataricus DNA sequence DG(C347):DC(B386) DG(C348):DC(B385) DG(C349):DC(B384) DG(C350):DC(B383) DG(C351):DC(B382) DA(C352):DT(B381) DA(C353):DT(B380) DG(C354):DC(B379) DG(C355):DC(B378) DA(C356):DT(B377) DT(C357):DA(B376) DT(C358):DA(B375) DC(C359):DT(B373) chainA ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 8 (244) SER244 0 0 0 0 0 0 0 0 0 1 0 0 0 (336) ARG336 0 0 0 0 0 0 0 0 0 3 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3pw2_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF AFLATOXIN B1 ADDUCT MODIFIED DNA (AFB1-FAPY) WITH DNA POLYMERASE IV AND INCOMING DTTP organism=Sulfolobus solfataricus DNA sequence DG(C347):DC(B386) DG(C348):DC(B385) DG(C349):DC(B384) DG(C350):DC(B383) DG(C351):DC(B382) DA(C352):DT(B381) DA(C353):DT(B380) DG(C354):DC(B379) DG(C355):DC(B378) DA(C356):DT(B377) DT(C357):DA(B376) DT(C358):DA(B375) DC(C359):DT(B373) chainA ( 33) VAL33 0 0 0 0 0 0 0 0 0 0 0 0 13 ( 43) ALA43 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 45) ALA45 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 77) MET77 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 79) LYS79 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvAtanyearkfgvkagipiveakkilpnavylpMrKevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvrfskfi >3pw4_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF AFLATOXIN B1 ADDUCT MODIFIED DNA (AFB1-N7-GUA) WITH DNA POLYMERASE IV AND INCOMING DATP organism=Sulfolobus solfataricus DNA sequence DG(C347):DC(B386) DG(C348):DC(B385) DG(C349):DC(B384) DG(C350):DC(B383) DG(C351):DC(B382) DA(C352):DT(B381) DA(C353):DT(B380) DG(C354):DC(B379) DG(C355):DC(B378) DA(C356):DT(B377) DT(C357):DA(B376) DT(C358):DA(B375) DC(C359):DG(B374) chainA (245) SER245 0 0 0 0 0 0 0 0 0 1 0 0 0 (333) ARG333 0 0 0 0 0 0 0 0 0 0 0 0 2 (337) ARG337 0 0 0 0 0 0 0 0 0 1 4 1 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >3pw5_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF AFLATOXIN B1 ADDUCT MODIFIED DNA (AFB1-N7-GUA) WITH DNA POLYMERASE IV AND INCOMING DTTP organism=Sulfolobus solfataricus DNA sequence DG(C347):DC(B386) DG(C348):DC(B385) DG(C349):DC(B384) DG(C350):DC(B383) DG(C351):DC(B382) DA(C352):DT(B381) DA(C353):DT(B380) DG(C354):DC(B379) DG(C355):DC(B378) DA(C356):DT(B377) DT(C357):DA(B376) DT(C358):DA(B375) DC(C359):DG(B374) chainA (337) ARG337 0 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3pw7_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF AFLATOXIN B1 ADDUCT MODIFIED DNA (AFB1-N7-GUA) WITH DNA POLYMERASE IV AND INCOMING DCTP organism=Sulfolobus solfataricus DNA sequence DA(B375):DT(C358) DA(B376):DT(C357) DT(B377):DA(C356) DC(B378):DG(C355) DC(B379):DG(C354) DT(B380):DA(C353) DT(B381):DA(C352) DC(B382):DG(C351) DC(B383):DG(C350) DC(B384):DG(C349) DC(B385):DG(C348) DC(B386):DG(C347) chainA (299) SER300 0 0 0 0 1 0 0 0 0 0 0 0 (338) ARG339 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence hhmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivSrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3px0_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DNA AND DCTP-DA MISMATCH (TAUTOMER) IN CLOSED CONFORMATION organism=Geobacillus kaustophilus DNA sequence DC(E21):DG(F12) DC(E22):DG(F11) DT(E23):DA(F10) DG(E24):DC(F9) DA(E25):DT(F8) DC(E26):DG(F7) DT(E27):DA(F6) DC(E28):DG(F5) chainD (285) LYS582 0 0 0 1 6 6 0 0 (318) ARG615 0 0 0 0 0 0 0 4 (328) ASN625 0 0 0 0 0 3 5 1 (500) GLN797 0 0 0 0 0 0 0 1 (532) HIS829 0 0 0 0 0 0 0 2 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3px4_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DNA AND DDCTP-DA MISMATCH (WOBBLE) IN AJAR CONFORMATION organism=Geobacillus kaustophilus DNA sequence DA(F3):DCT(D202) DG(F4):DOC(E29) DG(F5):DC(E28) DA(F6):DT(E27) DG(F7):DC(E26) DT(F8):DA(E25) DC(F9):DG(E24) DA(F10):DT(E23) DG(F11):DC(E22) DG(F12):DC(E21) chainD (285) LYS582 0 0 0 0 7 6 1 0 0 0 (318) ARG615 0 9 4 0 0 0 0 0 0 0 (328) ASN625 0 0 1 4 3 0 0 0 0 0 (356) ASP653 1 0 0 0 0 0 0 0 0 0 (359) GLN656 8 0 0 0 0 0 0 0 0 0 (385) HIS682 8 0 0 0 0 0 0 0 0 0 (405) ARG702 6 0 0 0 0 0 0 0 0 0 (409) LYS706 13 0 0 0 0 0 0 0 0 0 (413) TYR710 18 0 0 0 0 0 0 0 0 0 (417) TYR714 4 0 0 0 0 0 0 0 0 0 (419) ILE716 4 0 0 0 0 0 0 0 0 0 (500) GLN797 0 4 1 0 0 0 0 0 0 0 (532) HIS829 0 0 1 0 0 0 0 0 0 0 (533) ASP830 4 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnYgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3px6_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DNA AND DDCTP-DA MISMATCH (TAUTOMER) IN CLOSED CONFORMATION organism=Geobacillus kaustophilus DNA sequence DC(E21):DG(F12) DC(E22):DG(F11) DT(E23):DA(F10) DG(E24):DC(F9) DA(E25):DT(F8) DC(E26):DG(F7) DT(E27):DA(F6) DC(E28):DG(F5) DOC(E29):DG(F4) DCT(D202):DA(F3) chainD (287) LYS582 0 0 0 1 5 7 0 0 0 0 (320) ARG615 0 0 0 0 0 0 0 3 9 0 (330) ASN625 0 0 0 0 0 3 4 1 0 0 (358) ASP653 0 0 0 0 0 0 0 0 0 7 (360) SER655 0 0 0 0 0 0 0 0 0 2 (361) GLN656 0 0 0 0 0 0 0 0 0 3 (362) ILE657 0 0 0 0 0 0 0 0 0 2 (363) GLU658 0 0 0 0 0 0 0 0 0 1 (387) HIS682 0 0 0 0 0 0 0 0 0 6 (407) ARG702 0 0 0 0 0 0 0 0 0 8 (411) LYS706 0 0 0 0 0 0 0 0 0 15 (412) ALA707 0 0 0 0 0 0 0 0 0 2 (415) TYR710 0 0 0 0 0 0 0 0 0 22 (419) TYR714 0 0 0 0 0 0 0 0 0 5 (421) ILE716 0 0 0 0 0 0 0 0 0 3 (502) GLN797 0 0 0 0 0 0 0 1 4 0 (534) HIS829 0 0 0 0 0 0 0 1 0 0 (535) ASP830 0 0 0 0 0 0 0 0 0 6 prot.sequence lakmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnYgivYgIsdyglaqNlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3py8_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF A MUTANT OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH DNA AND DDCTP organism=Thermus aquaticus DNA sequence DG(C204):DCT(A113) DG(C205):DOC(B112) DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 0 0 5 4 0 0 0 0 0 0 0 (280) ARG573 0 8 3 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 0 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 0 0 1 11 1 0 0 0 0 0 0 0 0 (317) ASP610 7 0 0 0 0 0 0 0 0 0 0 0 0 (319) SER612 2 0 0 0 0 0 0 0 0 0 0 0 0 (320) GLN613 2 0 0 0 0 0 0 0 0 0 0 0 0 (321) LYS614 1 0 0 0 0 0 0 0 0 0 0 0 0 (322) GLU615 1 0 0 0 0 0 0 0 0 0 0 0 0 (346) HIS639 7 0 0 0 0 0 0 0 0 0 0 0 0 (366) ARG659 8 0 0 0 0 0 0 0 0 0 0 0 0 (370) LYS663 13 0 0 0 0 0 0 0 0 0 0 0 0 (371) THR664 5 0 0 0 0 0 0 0 0 0 0 0 0 (374) PHE667 29 0 0 0 0 0 0 0 0 0 0 0 0 (378) TYR671 7 0 0 0 0 0 0 0 0 0 0 0 0 (380) MET673 2 0 0 0 0 0 0 0 0 0 0 0 0 (461) GLN754 0 4 0 0 0 0 0 0 0 0 0 0 0 (491) HIS784 0 0 1 0 0 0 0 0 0 0 0 0 0 (492) ASP785 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqkelrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraakTinFgvlYgMsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaerkafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3pzp_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE KAPPA EXTENDING OPPOSITE A CIS-SYN THYMINE DIMER organism=Homo sapiens DNA sequence DC(U5):DA(Q13) DG(U7):DC(Q12) DG(U8):DC(Q11) DT(U9):DA(Q10) DC(U10):DG(Q9) DC(U11):DG(Q8) DT(U12):DA(Q7) DT(U13):DA(Q6) DC(U14):DG(Q5) DC(U15):DG(Q4) DC(U16):DG(Q3) DC(U17):DG(Q2) chainB ( 26) THR44 4 0 0 0 0 0 0 0 0 0 0 0 ( 31) PHE49 27 0 0 0 0 0 0 0 0 0 0 0 (135) PRO153 14 0 0 0 0 0 0 0 0 0 0 0 (137) PHE155 4 0 0 0 0 0 0 0 0 0 0 0 (138) ILE156 4 0 0 0 0 0 0 0 0 0 0 0 (340) SER415 0 0 0 1 0 0 0 0 0 0 0 0 (394) THR469 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence mglndnkagmegldkekinkiimeaTkgsrFygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsmlstsnyharrfgvraamPgFIakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfiknsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthltrdgerkSmsvertfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiklknvnfevkTrastvssvvstaeeifaiakellkteidadfphplrlrlmgvrissfpn >3q05_ABCD:p53-like_transcription_factors;p53_tetramerization_domain; title=AN INDUCED FIT MECHANISM REGULATES P53 DNA BINDING KINETICS TO CONFER SEQUENCE SPECIFICITY organism=HOMO SAPIENS DNA sequence DT(K3):DA(L50) DG(K4):DC(L49) DA(K5):DT(L48) DG(K6):DC(L47) DA(K7):DT(L46) DC(K8):DG(L45) DA(K9):DT(L44) DT(K10):DA(L43) DG(K11):DC(L42) DC(K12):DG(L41) DC(K13):DG(L40) DC(K14):DG(L39) DA(K15):DT(L38) DG(K16):DC(L37) DA(K17):DT(L36) DC(K18):DG(L35) DA(K19):DT(L34) DT(K20):DA(L33) DG(K21):DC(L32) DC(K22):DG(L31) DC(K23):DG(L30) DC(K24):DG(L29) DG(K25):DC(L28) DT(K26):DA(L27) chainA (155) ARG248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 11 2 0 0 0 0 chainC ( 27) LYS120 0 0 0 0 0 0 0 0 0 1 1 4 0 0 0 0 0 0 0 0 0 0 0 0 (155) ARG248 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 12 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (155) ARG248 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 2 10 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 2 8 2 0 0 0 0 0 0 0 0 0 (155) ARG248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 13 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnRrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat/sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnRrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat/sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnRrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat/sssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnRrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat >3q05_B:p53-like_transcription_factors;p53_tetramerization_domain; title=AN INDUCED FIT MECHANISM REGULATES P53 DNA BINDING KINETICS TO CONFER SEQUENCE SPECIFICITY organism=HOMO SAPIENS DNA sequence DT(K3):DA(L50) DG(K4):DC(L49) DA(K5):DT(L48) DG(K6):DC(L47) DA(K7):DT(L46) DC(K8):DG(L45) DA(K9):DT(L44) DT(K10):DA(L43) DG(K11):DC(L42) DC(K12):DG(L41) DC(K13):DG(L40) DC(K14):DG(L39) DA(K15):DT(L38) DG(K16):DC(L37) DA(K17):DT(L36) DC(K18):DG(L35) DA(K19):DT(L34) DT(K20):DA(L33) DG(K21):DC(L32) DC(K22):DG(L31) DC(K23):DG(L30) DC(K24):DG(L29) DG(K25):DC(L28) DT(K26):DA(L27) chainB ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 2 8 2 0 0 0 0 0 0 0 0 0 (155) ARG248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 13 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnRrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat >3q06_ABCD:p53-like_transcription_factors;p53_tetramerization_domain; title=AN INDUCED FIT MECHANISM REGULATES P53 DNA BINDING KINETICS TO CONFER SEQUENCE SPECIFICITY organism=HOMO SAPIENS DNA sequence DA(L27):DT(K26) DC(L28):DG(K25) DG(L29):DC(K24) DG(L30):DC(K23) DG(L31):DC(K22) DC(L32):DG(K21) DA(L33):DT(K20) DT(L34):DA(K19) DG(L35):DC(K18) DT(L36):DA(K17) DC(L37):DG(K16) DT(L38):DA(K15) DG(L39):DC(K14) DG(L40):DC(K13) DG(L41):DC(K12) DC(L42):DG(K11) DA(L43):DT(K10) DT(L44):DA(K9) DG(L45):DC(K8) DT(L46):DA(K7) DC(L47):DG(K6) DT(L48):DA(K5) DC(L49):DG(K4) DA(L50):DT(K3) chainA (182) CYS277 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 4 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 25) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 5 7 2 0 0 0 0 0 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 10 0 0 0 0 0 0 0 chainD (181) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (185) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 2 0 0 0 0 chainB ( 25) LYS120 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 (181) ALA276 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 0 0 0 11 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence svpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnrrpilviitledssgnllgrdsfevrvcaCpgRdrrteeenlrkkktmdgeyftlqirgrerfeqfrernealelkdaq/svpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnrrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkkktmdgeyftlqirgrerfeqfrernealelkdaq/svpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnrrpilviitledssgnllgrdsfevrvcaCpgRdrrteeenlrkkktmdgeyftlqirgrerfeqfrernealelkdaq/svpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnrrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkkktmdgeyftlqirgrerfeqfrernealelkdaq >3q06_D:p53-like_transcription_factors;p53_tetramerization_domain; title=AN INDUCED FIT MECHANISM REGULATES P53 DNA BINDING KINETICS TO CONFER SEQUENCE SPECIFICITY organism=HOMO SAPIENS DNA sequence DG(K4):DC(L49) DA(K5):DT(L48) DG(K6):DC(L47) DA(K7):DT(L46) DC(K8):DG(L45) DA(K9):DT(L44) DT(K10):DA(L43) DG(K11):DC(L42) DC(K12):DG(L41) DC(K13):DG(L40) DC(K14):DG(L39) DA(K15):DT(L38) DG(K16):DC(L37) DA(K17):DT(L36) DC(K18):DG(L35) DA(K19):DT(L34) DT(K20):DA(L33) DG(K21):DC(L32) DC(K22):DG(L31) DC(K23):DG(L30) DC(K24):DG(L29) chainD (181) ALA276 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) CYS277 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 2 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence svpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnrrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkkktmdgeyftlqirgrerfeqfrernealelkdaq >3q0a_B: title=X-RAY CRYSTAL STRUCTURE OF THE TRANSCRIPTION INITIATION COMPLEX OF THE N4 MINI-VRNAP WITH P2 PROMOTER: MISMATCH COMPLEX organism=Enterobacteria phage N4 DNA sequence DG(D3) DT(D4) DC(D5) DA(D6) DA(D7) DA(D8) DA(D9) DG(D10):DC(D22) DA(D11):DT(D21) DA(D12):DT(D20) DG(D13):DC(D19) DC(D14):DG(D18) DG(D15):DA(D17) DG(D16) chainB (110) LYS114 0 0 0 0 0 0 0 0 0 0 0 0 8 4 (112) VAL116 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (115) ARG119 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (125) TRP129 0 0 0 0 0 0 0 0 0 0 0 0 0 45 (167) ALA171 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (169) LYS173 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (170) ASP174 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (173) ASP177 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (176) ALA180 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (177) ILE181 0 0 0 0 0 0 15 0 0 0 0 0 0 0 (198) THR202 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (200) THR204 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (201) GLU205 0 0 0 0 0 9 4 0 0 0 0 0 0 0 (204) SER208 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (263) LYS267 0 0 0 0 0 0 0 17 0 0 0 0 0 0 (264) LYS268 0 0 0 0 0 0 0 10 0 0 0 0 0 0 (265) THR269 0 0 0 0 0 0 0 6 3 0 0 0 0 0 (314) ARG318 0 0 0 0 38 0 0 0 0 0 0 0 0 0 (671) ILE675 0 17 0 0 0 0 0 0 0 0 0 0 0 0 (674) TYR678 0 8 0 0 0 0 0 0 0 0 0 0 0 0 (676) SER680 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (813) GLN817 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (817) GLN821 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (897) ASP901 0 0 0 0 0 0 0 0 0 0 2 8 14 0 (900) ARG904 0 0 0 0 0 0 0 0 0 23 14 7 0 0 (913) VAL917 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (917) PRO921 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (921) ILE925 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence teelkegidavypslvgtadskaegiknyfklsftlpeeqksrtvgseaplkdvaqalssraryelfteketanpafngevikrykelmehgegiadilrsrlakflntKdVgkRfaqgteanrWvggkllniveqdgdtfkyneqllqtavlaglqwrltatsntAiKDakDvaAItgidqallpeglveqfdtgmTlTEavSslaqkiesywglsrnpnaplgytkgiptamaaeilaafvestdvvenivdmseidpdnKKTiglytiteldsfdpinsfptaieeavlvnptekmffgddippvantqlRnpavrntpeqkaalkaeqatefyvhtpmvqfyetlgkdrilelmgagtlnkellndnhakslegknrsvedsynqlfsvieqvraqsedistvpihyaynmtrvgrmqmlgkynpqsaklvreailptkatldlsnqnnedfsafqlglaqaldikvhtmtrevmsdeltkllegnlkpaidmmvefnttgslpenavdvlntalgdrksfvalmalmeysrylvaedksafvtplyveadgvtngpinammlmtgglftpdwirniakgglfigspnktmnehrstadnndlyqastnalmeslgklrsnyasnmpiqsqidsllslmdlflpdinlgengalelkrgiaknpltItiYgSgargiagklvssvtdaiyermsdvlkarakdpnisaamamfgkqaaseahaeellarflkdmetltstvpvkrkgvlelqstgtgakgkinpktytikgeqlkalqenmlhffveplrngitqtvgeslvysteqlQkatQiqsvvledmfkqrvqeklaekakdptwkkgdfltqkelndiqaslnnlapmietgsqtfyiagsenaevanqvlatnldDrmRvpmsiyapaqagVagiPfmtIgtgdgmmmqtlstmkgapkntlkifdgmniglnditdasrkaneavytswqgnpiknvyesyakfmknvdfsklspealeaigksaleydqrenatvddianaasliernlrnialgvdirhkvldkvnlsidqmaavgapyqnngkidlsnmtpeqqadelnklfreelear >3q0c_AX:PUA_domain-like; title=CRYSTAL STRUCTURE OF SUVH5 SRA-FULLY METHYLATED CG DNA COMPLEX IN SPACE GROUP P6122 organism=Arabidopsis thaliana DNA sequence DA(C1):DT(B10) DC(C2):DG(B9) DT(C3):DA(B8) DA(C4):DT(B7) 5CM(C5):DG(B6) DG(C6):5CM(B5) DT(C7):DA(B4) DA(C8):DT(B3) DG(C9):DC(B2) DT(C10):DA(B1) chainX ( 30) SER391 0 0 3 10 1 0 0 0 0 0 ( 31) GLN392 0 0 0 62 7 12 0 0 0 0 ( 52) SER413 0 0 0 0 3 0 0 0 0 0 ( 55) TYR416 0 0 0 0 26 0 0 0 0 0 ( 57) ASP418 0 0 0 0 11 0 0 0 0 0 ( 67) TYR428 0 0 0 0 27 0 0 0 0 0 ( 68) THR429 0 0 0 0 1 0 0 0 0 0 ( 70) GLN431 0 0 0 0 1 0 0 0 0 0 chainA ( 30) SER391 0 0 0 0 0 1 5 3 0 0 ( 31) GLN392 0 0 0 0 9 12 36 0 0 0 ( 51) SER412 0 0 0 0 0 1 0 0 0 0 ( 52) SER413 0 0 0 0 0 4 0 0 0 0 ( 55) TYR416 0 0 0 0 0 22 0 0 0 0 ( 57) ASP418 0 0 0 0 0 11 0 0 0 0 ( 67) TYR428 0 0 0 0 0 26 0 0 0 0 ( 68) THR429 0 0 0 0 0 1 0 0 0 0 ( 70) GLN431 0 0 0 0 0 1 0 0 0 0 prot.sequence qiigtvpgvevgdefqyrmelnllgihrpSQsgidymkddggelvatsivssggyndvldnsdvliytgqggnvppkdqqlvtgnlalknsinkknpvrvirgiknyvydglylveeyweetgshgklvfkfklrripgqpelp/qiigtvpgvevgdefqyrmelnllgihrpSQsgidymkddggelvatsivssggyndvldnsdvliytgqggnvgeppkdqqlvtgnlalknsinkknpvrvirgiknyvydglylveeyweetgshgklvfkfklrripgqpelpw >3q0c_X:PUA_domain-like; title=CRYSTAL STRUCTURE OF SUVH5 SRA-FULLY METHYLATED CG DNA COMPLEX IN SPACE GROUP P6122 organism=Arabidopsis thaliana DNA sequence DA(B1):DT(C10) DC(B2):DG(C9) DT(B3):DA(C8) DA(B4):DT(C7) 5CM(B5):DG(C6) DG(B6):5CM(C5) DT(B7):DA(C4) DA(B8):DT(C3) DG(B9):DC(C2) DT(B10):DA(C1) chainX ( 30) SER391 0 0 0 0 0 1 5 3 0 0 ( 31) GLN392 0 0 0 0 12 7 31 0 0 0 ( 52) SER413 0 0 0 0 0 3 0 0 0 0 ( 55) TYR416 0 0 0 0 0 26 0 0 0 0 ( 57) ASP418 0 0 0 0 0 11 0 0 0 0 ( 67) TYR428 0 0 0 0 0 27 0 0 0 0 ( 68) THR429 0 0 0 0 0 1 0 0 0 0 ( 70) GLN431 0 0 0 0 0 1 0 0 0 0 prot.sequence qiigtvpgvevgdefqyrmelnllgihrpSQsgidymkddggelvatsivssggyndvldnsdvliytgqggnvgeppkdqqlvtgnlalknsinkknpvrvirgiknyvydglylveeyweetgshgklvfkfklrripgqpelpw >3q0d_AX:PUA_domain-like; title=CRYSTAL STRUCTURE OF SUVH5 SRA- HEMI METHYLATED CG DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DT(B1):DA(C10) DC(B2):DG(C9) DC(B3):DG(C8) DA(B4):DT(C7) 5CM(B5):DG(C6) DG(B6):DC(C5) DT(B7):DA(C4) DC(B8):DG(C3) DA(B9):DT(C2) DG(B10):DC(C1) chainX ( 30) SER391 0 0 0 0 0 1 6 1 0 0 ( 31) GLN392 0 0 0 0 18 11 34 0 0 0 ( 47) SER413 0 0 0 0 0 3 0 0 0 0 ( 50) TYR416 0 0 0 0 0 19 0 0 0 0 ( 52) ASP418 0 0 0 0 0 8 0 0 0 0 ( 62) TYR428 0 0 0 0 0 15 0 0 0 0 chainA ( 30) SER391 0 0 1 12 1 0 0 0 0 0 ( 31) GLN392 0 0 0 66 10 16 0 0 0 0 ( 49) SER412 0 0 0 0 2 0 0 0 0 0 ( 50) SER413 0 0 0 0 2 0 0 0 0 0 ( 53) TYR416 0 0 0 0 25 0 0 0 0 0 ( 55) ASP418 0 0 0 0 11 0 0 0 0 0 ( 65) TYR428 0 0 0 0 27 0 0 0 0 0 ( 66) THR429 0 0 0 0 1 0 0 0 0 0 ( 68) GLN431 0 0 0 0 2 0 0 0 0 0 prot.sequence qiigtvpgvevgdefqyrmelnllgihrpSQsgidymkdgelvatsivssggyndvldnsdvliytgqggnveppkdqqlvtgnlalknsinkknpvrvirgikknyvydglylveeyweetgshgklvfkfklrripgqpelpw/qiigtvpgvevgdefqyrmelnllgihrpSQsgidymklvatsivsSggYnDvldnsdvliYtgqggnvpkdqqlvtgnlalknsinkknpvrvirgikknyvydglylveeyweetgshgklvfkfklrripgqpelpw >3q0d_X:PUA_domain-like; title=CRYSTAL STRUCTURE OF SUVH5 SRA- HEMI METHYLATED CG DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DT(B1):DA(C10) DC(B2):DG(C9) DC(B3):DG(C8) DA(B4):DT(C7) 5CM(B5):DG(C6) DG(B6):DC(C5) DT(B7):DA(C4) DC(B8):DG(C3) DA(B9):DT(C2) DG(B10):DC(C1) chainX ( 30) SER391 0 0 0 0 0 1 6 1 0 0 ( 31) GLN392 0 0 0 0 18 11 34 0 0 0 ( 47) SER413 0 0 0 0 0 3 0 0 0 0 ( 50) TYR416 0 0 0 0 0 19 0 0 0 0 ( 52) ASP418 0 0 0 0 0 8 0 0 0 0 ( 62) TYR428 0 0 0 0 0 15 0 0 0 0 prot.sequence qiigtvpgvevgdefqyrmelnllgihrpSQsgidymklvatsivsSggYnDvldnsdvliYtgqggnvpkdqqlvtgnlalknsinkknpvrvirgikknyvydglylveeyweetgshgklvfkfklrripgqpelpw >3q0f_A:PUA_domain-like; title=CRYSTAL STRUCTURE OF SUVH5 SRA- METHYLATED CHH DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(C2):DT(B9) DC(C3):DG(B8) DT(C4):DA(B7) 5CM(C5):DG(B6) DC(C6):DG(B5) DT(C7):DA(B4) DC(C8):DG(B3) DA(C9):DT(B2) DG(C10):DC(B1) chainA ( 30) SER391 0 0 0 0 2 1 0 0 0 ( 31) GLN392 0 0 8 0 34 0 0 0 0 ( 34) ILE395 0 0 0 1 0 0 0 0 0 ( 51) SER412 0 0 0 1 0 0 0 0 0 ( 52) SER413 0 0 0 3 0 0 0 0 0 ( 55) TYR416 0 0 0 29 0 0 0 0 0 ( 57) ASP418 0 0 0 14 0 0 0 0 0 ( 67) TYR428 0 0 0 35 0 0 0 0 0 ( 68) THR429 0 0 0 4 0 0 0 0 0 ( 70) GLN431 0 0 0 2 0 0 0 0 0 prot.sequence qiigtvpgvevgdefqyrmelnllgihrpSQsgIdymkddggelvatsivSSggYnDvldnsdvliYTgQggneppkdqqlvtgnlalknsinkknpvrvirgikknyvydglylveeyweetgshgklvfkfklrripgqpelpw >3q0f_AX:PUA_domain-like; title=CRYSTAL STRUCTURE OF SUVH5 SRA- METHYLATED CHH DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(C2):DT(B9) DC(C3):DG(B8) DT(C4):DA(B7) 5CM(C5):DG(B6) DC(C6):DG(B5) DT(C7):DA(B4) DC(C8):DG(B3) DA(C9):DT(B2) DG(C10):DC(B1) chainX ( 30) SER391 0 0 4 0 0 0 0 0 0 ( 31) GLN392 0 0 28 0 18 0 0 0 0 ( 34) ILE395 0 0 0 2 0 0 0 0 0 ( 51) SER412 0 0 0 2 0 0 0 0 0 ( 52) SER413 0 0 0 2 0 0 0 0 0 ( 55) TYR416 0 0 0 27 0 0 0 0 0 ( 57) ASP418 0 0 0 13 0 0 0 0 0 ( 67) TYR428 0 0 0 30 0 0 0 0 0 ( 68) THR429 0 0 0 3 0 0 0 0 0 ( 70) GLN431 0 0 0 1 0 0 0 0 0 chainA ( 30) SER391 0 0 0 0 2 1 0 0 0 ( 31) GLN392 0 0 8 0 34 0 0 0 0 ( 34) ILE395 0 0 0 1 0 0 0 0 0 ( 51) SER412 0 0 0 1 0 0 0 0 0 ( 52) SER413 0 0 0 3 0 0 0 0 0 ( 55) TYR416 0 0 0 29 0 0 0 0 0 ( 57) ASP418 0 0 0 14 0 0 0 0 0 ( 67) TYR428 0 0 0 35 0 0 0 0 0 ( 68) THR429 0 0 0 4 0 0 0 0 0 ( 70) GLN431 0 0 0 2 0 0 0 0 0 prot.sequence qiigtvpgvevgdefqyrmelnllgihrpSQsgIdymkddggelvatsivSSggYnDvldnsdvliYTgQggneppkdqqlvtgnlalknsinkknpvrvirgikknyvydglylveeyweetgshgklvfkfklrripgqpelpw/qiigtvpgvevgdefqyrmelnllgihrpSQsgidymkddggelvatsivssggyndvldnsdvliytgqggnppkdqqlvtgnlalknsinkknpvrvirgikknyvydglylveeyweetgshgklvfkfklrripgqpelpw >3q1m_A:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BMRR DIMER BOUND TO DNA AND THE LIGAND 4-AMINO- QUINALDINE organism=Bacillus subtilis DNA sequence DG(B-12) DA(B-11) DC(B-10) DC(B-9) DC(B-8) DT(B-7) DC(B-6) DC(B-5) DC(B-4) DC(B-3) DT(B-2) DT(B1) DA(B2) DG(B3) DG(B4) DG(B5) DG(B6) DA(B7) DG(B8) DG(B9) DG(B10) DT(B11) DC(B12) chainA ( 22) ARG23 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kesyysigevsklanvsikalRyydkidlfkpayvdpdtsYryytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaeglgpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkiril >3q22_B: title=X-RAY CRYSTAL STRUCTURE OF THE N4 MINI-VRNAP AND P2_7A PROMOTER TRANSCRIPTION INITIATION COMPLEX WITH GTP AND MAGNESIUM: SUBSTRATE COMPLEX I organism=Enterobacteria phage N4 DNA sequence DC(D22) DT(D3) DC(D4) DC(D5) DA(D6) DA(D7) DA(D8) DA(D9) DG(D10):DC(D22) DA(D11):DT(D21) DA(D12):DT(D20) DG(D13):DC(D19) DC(D14):DG(D18) DG(D15):DA(D17) DG(D16) chainB (110) LYS114 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 (112) VAL116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (115) ARG119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (125) TRP129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 (167) ALA171 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 (169) LYS173 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (170) ASP174 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (173) ASP177 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (177) ILE181 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 (198) THR202 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (200) THR204 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (201) GLU205 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 (263) LYS267 12 0 0 0 0 0 0 0 13 0 0 0 0 0 0 (264) LYS268 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 (265) THR269 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 (314) ARG318 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 (667) ASN671 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (671) ILE675 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 (674) TYR678 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (676) SER680 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (813) GLN817 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (897) ASP901 0 0 0 0 0 0 0 0 0 0 0 2 8 15 0 (900) ARG904 0 0 0 0 0 0 0 0 0 0 21 13 6 0 0 (913) VAL917 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (921) ILE925 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence teelkegidavypslvgtadskaegiknyfklsftlpeeqksrtvgseaplkdvaqalssraryelfteketanpafngevikrykelmehgegiadilrsrlakflntKdVgkRfaqgteanrWvggkllniveqdgdtfkyneqllqtavlaglqwrltatsntAiKDakDvaaItgidqallpeglveqfdtgmTlTEavsslaqkiesywglsrnpnaplgytkgiptamaaeilaafvestdvvenivdmseidpdnKKTiglytiteldsfdpinsfptaieeavlvnptekmffgddippvantqlRnpavrntpeqkaalkaeqatefyvhtpmvqfyetlgkdrilelmgagtlnkellndnhakslegknrsvedsynqlfsvieqvraqsedistvpihyaynmtrvgrmqmlgkynpqsaklvreailptkatldlsnqnnedfsafqlglaqaldikvhtmtrevmsdeltkllegnlkpaidmmvefnttgslpenavdvlntalgdrksfvalmalmeysrylvaedksafvtplyveadgvtngpinammlmtgglftpdwirniakgglfigspnktmnehrstadnndlyqastnalmeslgklrsnyasnmpiqsqidsllslmdlflpdinlgengalelkrgiakNpltItiYgSgargiagklvssvtdaiyermsdvlkarakdpnisaamamfgkqaaseahaeellarflkdmetltstvpvkrkgvlelqstgtgakgkinpktytikgeqlkalqenmlhffveplrngitqtvgeslvysteqlQkatqiqsvvledmfkqrvqeklaekakdptwkkgdfltqkelndiqaslnnlapmietgsqtfyiagsenaevanqvlatnldDrmRvpmsiyapaqagVagipfmtIgtgdgmmmqtlstmkgapkntlkifdgmniglnditdasrkaneavytswqgnpiknvyesyakfmknvdfsklspealeaigksaleydqrenatvddianaasliernlrnialgvdirhkvldkvnlsidqmaavgapyqnngkidlsnmtpeqqadelnklfreelear >3q23_B: title=X-RAY CRYSTAL STRUCTURE OF THE N4 MINI-VRNAP AND P2_7A PROMOTER TRANSCRIPTION INITIATION COMPLEX WITH GMPCPP AND MANGANESE: SUSTRATE COMPLEX II organism=Enterobacteria phage N4 DNA sequence DC(D22) DT(D3) DC(D4) DC(D5) DA(D6) DA(D7) DA(D8) DA(D9) DG(D10):DC(D22) DA(D11):DT(D21) DA(D12):DT(D20) DG(D13):DC(D19) DC(D14):DG(D18) DG(D15):DA(D17) DG(D16) chainB (110) LYS114 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 (112) VAL116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (115) ARG119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (125) TRP129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 (167) ALA171 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 (169) LYS173 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (170) ASP174 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (173) ASP177 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (177) ILE181 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 (198) THR202 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (200) THR204 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (201) GLU205 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 (263) LYS267 13 0 0 0 0 0 0 0 13 0 0 0 0 0 0 (264) LYS268 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (265) THR269 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 (314) ARG318 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 (671) ILE675 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 (674) TYR678 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (676) SER680 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (813) GLN817 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (817) GLN821 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (897) ASP901 0 0 0 0 0 0 0 0 0 0 0 2 8 14 0 (900) ARG904 0 0 0 0 0 0 0 0 0 0 21 12 6 0 0 (913) VAL917 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (921) ILE925 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence teelkegidavypslvgtadskaegiknyfklsftlpeeqksrtvgseaplkdvaqalssraryelfteketanpafngevikrykelmehgegiadilrsrlakflntKdVgkRfaqgteanrWvggkllniveqdgdtfkyneqllqtavlaglqwrltatsntAiKDakDvaaItgidqallpeglveqfdtgmTlTEavsslaqkiesywglsrnpnaplgytkgiptamaaeilaafvestdvvenivDmseidpdnKKTiglytiteldsfdpinsfptaieeavlvnptekmffgddippvantqlRnpavrntpeqkaalkaeqatefyvhtpmvqfyetlgkdrilelmgagtlnkellndnhakslegknrsvedsynqlfsvieqvraqsedistvpihyaynmtrvgRmqmlgkynpqsaklvreailptkatldlsnqnnedfsafqlglaqaldikvhtmtrevmsdeltkllegnlkpaidmmvefnttgslpenavdvlntalgdrksfvalmalmeysrylvaedksafvtplyveadgvtngpinammlmtgglftpdwirniakgglfigspnktmnehrstadnndlyqastnalmeslgklrsnyasnmpiqsqidsllslmdlflpdinlgengalelkrgiaknpltItiYgSgargiagklvssvtdaiyermsdvlkarakdpnisaamamfgkqaaseahaeellarflkdmetltstvpvkrkgvlelqstgtgakgkinpktytikgeqlkalqenmlhffveplrngitqtvgeslvysteqlQkatQiqsvvledmfkqrvqeklaekakdptwkkgdfltqkelndiqaslnnlapmietgsqtfyiagsenaevanqvlatnldDrmRvpmsiyapaqagVagipfmtIgtgdgmmmqtlstmkgapkntlkifdgmniglnditdasrkaneavytswqgnpiknvyesyakfmknvdfsklspealeaigksaleydqrenatvddianaasliernlrnialgvdirhkvldkvnlsidqmaavgapyqnngkidlsnmtpeqqadelnklfreelear >3q2y_A:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BMRR BOUND TO ETHIDIUM organism=Bacillus subtilis DNA sequence DG(B-12) DA(B-11) DC(B-10) DC(B-9) DC(B-8) DT(B-7) DC(B-6) DC(B-5) DC(B-4) DC(B-3) DT(B-2) DT(B1) DA(B2) DG(B3) DG(B4) DG(B5) DG(B6) DA(B7) DG(B8) DG(B9) DG(B10) DT(B11) DC(B12) chainA ( 19) LYS20 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kesyysigevsklanvsiKalRyydkidlfkpayvdpdtsYryytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaeglgpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkiril >3q3d_A:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BMRR BOUND TO PUROMYCIN organism=Bacillus subtilis DNA sequence DG(B-12) DA(B-11) DC(B-10) DC(B-9) DC(B-8) DT(B-7) DC(B-6) DC(B-5) DC(B-4) DC(B-3) DT(B-2) DT(B1) DA(B2) DG(B3) DG(B4) DG(B5) DG(B6) DA(B7) DG(B8) DG(B9) DG(B10) DT(B11) DC(B12) chainA ( 22) ARG23 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kesyysigevsklanvsikalRyydkidlfkpayvdpdtsYryytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaeglgpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkiril >3q5f_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE SALMONELLA TRANSCRIPTIONAL REGULATOR SLYA IN COMPLEX WITH DNA organism=Salmonella enterica DNA sequence DA(C2):DT(D23) DT(C3):DA(D22) DA(C4):DT(D21) DA(C5):DT(D20) DC(C6):DG(D19) DT(C7):DA(D18) DT(C8):DA(D17) DA(C9):DT(D16) DG(C10):DC(D15) DC(C11):DG(D14) DA(C12):DT(D13) DA(C13):DT(D12) DG(C14):DC(D11) DC(C15):DG(D10) DT(C16):DA(D9) DA(C17):DT(D8) DA(C18):DT(D7) DT(C19):DA(D6) DT(C20):DA(D5) DA(C21):DT(D4) DT(C22):DA(D3) DA(C23):DT(D2) chainA ( 58) GLU59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 59) GLN60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 60) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 6 2 0 0 0 0 0 ( 61) SER62 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 ( 63) VAL64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 ( 64) ARG65 0 0 0 0 0 0 0 0 0 0 0 14 11 4 0 0 0 0 0 0 0 0 ( 85) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 2 prot.sequence esplgsdlarlvriwralidhrlkpleltqthwvtlhnihqlppdqsqiqlakaigiEQPSlVRtldqledkglisrqtcasdrRakrikltekaepliaemeevihktrgeilagisseeiellikliaklehnimelhs >3q5f_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE SALMONELLA TRANSCRIPTIONAL REGULATOR SLYA IN COMPLEX WITH DNA organism=Salmonella enterica DNA sequence DT(D2):DA(C23) DA(D3):DT(C22) DT(D4):DA(C21) DA(D5):DT(C20) DA(D6):DT(C19) DT(D7):DA(C18) DT(D8):DA(C17) DA(D9):DT(C16) DG(D10):DC(C15) DC(D11):DG(C14) DT(D12):DA(C13) DT(D13):DA(C12) DG(D14):DC(C11) DC(D15):DG(C10) DT(D16):DA(C9) DA(D17):DT(C8) DA(D18):DT(C7) DG(D19):DC(C6) DT(D20):DA(C5) DT(D21):DA(C4) DA(D22):DT(C3) DT(D23):DA(C2) chainA ( 58) GLU59 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLN60 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PRO61 0 0 0 0 0 2 6 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) SER62 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) VAL64 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG65 0 0 0 0 0 0 0 0 4 11 14 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG86 2 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 15) ARG17 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 57) GLU59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 58) GLN60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 59) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 5 1 0 0 0 0 0 ( 60) SER62 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 62) VAL64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 ( 63) ARG65 0 0 0 0 0 0 0 0 0 0 0 17 11 4 0 0 0 0 0 0 0 0 ( 84) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 1 prot.sequence esplgsdlarlvriwralidhrlkpleltqthwvtlhnihqlppdqsqiqlakaigiEQPSlVRtldqledkglisrqtcasdrRakrikltekaepliaemeevihktrgeilagisseeiellikliaklehnimelhs/splgsdlarlvriwRalidhrlkpleltqthwvtlhnihqlppdqsqiqlakaigiEQPSlVRtldqledkglisrqtcasdrRakrikltekaepliaemeevihktrgeilagisseeiellikliaklehnimelhs >3q5p_A:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BMRR BOUND TO TETRACYCLINE organism=Bacillus subtilis DNA sequence DG(B-12) DA(B-11) DC(B-10) DC(B-9) DC(B-8) DT(B-7) DC(B-6) DC(B-5) DC(B-4) DC(B-3) DT(B-2) DT(B1) DA(B2) DG(B3) DG(B4) DG(B5) DG(B6) DA(B7) DG(B8) DG(B9) DG(B10) DT(B11) DC(B12) chainA ( 22) ARG23 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kesyysigevsklanvsikalRyydkidlfkpayvdpdtsYryytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaeglgpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkiril >3q5r_A:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BMRR BOUND TO KANAMYCIN organism=Bacillus subtilis DNA sequence DG(B-12) DA(B-11) DC(B-10) DC(B-9) DC(B-8) DT(B-7) DC(B-6) DC(B-5) DC(B-4) DC(B-3) DT(B-2) DT(B1) DA(B2) DG(B3) DG(B4) DG(B5) DG(B6) DA(B7) DG(B8) DG(B9) DG(B10) DT(B11) DC(B12) chainA ( 21) ARG23 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR42 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esyysigevsklanvsikalRyydkidlfkpayvdpdtsYryytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaeglgpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkiril >3q5s_A:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BMRR BOUND TO ACETYLCHOLINE organism=Bacillus subtilis DNA sequence DG(B-12) DA(B-11) DC(B-10) DC(B-9) DC(B-8) DT(B-7) DC(B-6) DC(B-5) DC(B-4) DC(B-3) DT(B-2) DT(B1) DA(B2) DG(B3) DG(B4) DG(B5) DG(B6) DA(B7) DG(B8) DG(B9) DG(B10) DT(B11) DC(B12) chainA ( 21) ARG23 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR42 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esyysigevsklanvsikalRyydkidlfkpayvdpdtsYryytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaeglgpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkiril >3q8k_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN FLAP ENDONUCLEASE FEN1 (WT) IN COMPLEX WITH PRODUCT 5'-FLAP DNA, SM3+, AND K+ organism=Homo sapiens DNA sequence DG(D13):DC(F6) DA(D14):DT(F5) DC(D15):DG(F4) DG(D16):DC(F3) DG(D17):DC(F2) DT(D18):DA(F1) chainA ( 44) ALA45 1 0 0 0 0 0 ( 45) VAL46 8 0 0 0 0 0 ( 47) GLN48 12 8 0 0 0 0 ( 52) LEU53 8 0 0 0 0 0 ( 64) MET65 5 0 0 0 0 0 (319) ARG320 0 0 1 0 0 0 prot.sequence giqglakliadvapsairendiksyfgrkvaidasmsiyqfliAVrQggdvLqneegettshlMgmfyrtirmmengikpvyvfdgkppqlksgelakrserraeaekqlqqaqaagaeqevekftkrlvkvtkqhndeckhllslmgipyldapseaeascaalvkagkvyaaatedmdcltfgspvlmrhltaseakklpiqefhlsrilqelglnqeqfvdlcillgsdycesirgigpkravdliqkhksieeivrrldpnkypvpenwlhkeahqlflepevldpesvelkwsepneeelikfmcgekqfseeRirsgvkrlsksrqgstlevlfq >3q8l_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN FLAP ENDONUCLEASE FEN1 (WT) IN COMPLEX WITH SUBSTRATE 5'-FLAP DNA, SM3+, AND K+ organism=Homo sapiens DNA sequence DA(D1):DT(E12) DC(D2):DG(E11) DT(D3):DA(E10) DC(D4):DG(E9) DT(D5):DA(E8) DG(D6):DC(E7) DC(D7):DG(E6) DC(D8):DG(E5) DT(D9):DA(E4) DC(D10):DG(E3) DA(D11):DT(E2) DA(D12):DT(E1) chainA ( 39) TYR40 0 0 0 0 0 0 0 0 0 0 0 31 ( 43) ILE44 0 0 0 0 0 0 0 0 0 0 0 17 (244) ARG245 0 1 1 0 0 0 0 0 0 0 0 0 prot.sequence giqglakliadvapsairendiksyfgrkvaidasmsiYqflIavrqggdvlqneegettshlmgmfyrtirmmengikpvyvfdgkppqlksgelakrserraeaekqlqqaqaagaeqevekftkrlvkvtkqhndeckhllslmgipyldapseaeascaalvkagkvyaaatedmdcltfgspvlmrhltaseakklpiqefhlsrilqelglnqeqfvdlcillgsdycesirgigpkRavdliqkhksieeivrrldpnkypvpenwlhkeahqlflepevldpesvelkwsepneeelikfmcgekqfseerirsgvkrlsksrqgstlevlfq >3q8m_B:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN FLAP ENDONUCLEASE FEN1 (D181A) IN COMPLEX WITH SUBSTRATE 5'-FLAP DNA AND K+ organism=Homo sapiens DNA sequence DG(D13):DC(F6) DA(D14):DT(F5) DC(D15):DG(F4) DG(D16):DC(F3) DG(D17):DC(F2) DT(D18):DA(F1) chainB ( 44) ALA45 2 0 0 0 0 0 ( 45) VAL46 11 0 0 0 0 0 ( 47) GLN48 9 9 0 0 0 0 ( 52) LEU53 9 0 0 0 0 0 ( 64) MET65 4 0 0 0 0 0 (319) ARG320 1 1 1 0 0 0 prot.sequence giqglakliadvapsairendiksyfgrkvaidasmsiyqfliAVrQggdvLqneegettshlMgmfyrtirmmengikpvyvfdgkppqlksgelakrserraeaekqlqqaqaagaeqevekftkrlvkvtkqhndeckhllslmgipyldapseaeascaalvkagkvyaaatedmacltfgspvlmrhltaseakklpiqefhlsrilqelglnqeqfvdlcillgsdycesirgigpkravdliqkhksieeivrrldpnkypvpenwlhkeahqlflepevldpesvelkwsepneeelikfmcgekqfseeRirsgvkrlsksrqgs >3q8p_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE IOTA INCORPORATING DCTP OPPOSITE 8-OXO-GUANINE organism=Homo sapiens DNA sequence DA(P867):DT(T847) DG(P868):DC(T846) DG(P869):DC(T845) DA(P870):DT(T844) DC(P871):DG(T843) DC(P872):DG(T842) DC(P873):DG(T841) chainB ( 13) TYR39 0 0 0 0 0 0 1 ( 73) LEU99 0 0 0 0 0 0 1 (279) GLU305 0 0 0 0 0 1 4 (317) ARG343 2 0 0 0 0 0 0 (330) GLN361 2 0 0 0 0 0 0 prot.sequence srvivhvdldcfYaqvemisnpelkdkplgvqQkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedLtryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirrysgresrQcpipshviqklnydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >3q8q_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE IOTA INCORPORATING DATP OPPOSITE 8-OXO-GUANINE organism=Homo sapiens DNA sequence DG(T841):DC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainB ( 13) TYR39 1 0 0 0 0 0 0 ( 73) LEU99 1 0 0 0 0 0 0 (279) GLU305 4 3 0 0 0 0 0 (317) ARG343 0 0 0 0 0 0 2 (330) GLN361 0 0 0 0 0 0 2 prot.sequence srvivhvdldcfYaqvemisnpelkdkplgvqQkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedLtryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirrysgresrQcpipshviqklnydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >3q8r_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE IOTA INCORPORATING DGTP OPPOSITE 8-OXO-GUANINE organism=Homo sapiens DNA sequence DG(T841):DC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainB ( 13) TYR39 1 0 0 0 0 0 0 ( 73) LEU99 1 0 0 0 0 0 0 (279) GLU305 3 3 0 0 0 0 0 prot.sequence srvivhvdldcfYaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedLtryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirrysgResrqcpipshviqnydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >3q8s_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE IOTA INCORPORATING DTTP OPPOSITE 8-OXO-GUANINE organism=Homo sapiens DNA sequence DG(T841):DC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainB ( 13) TYR39 1 0 0 0 0 0 0 (279) GLU305 4 3 0 0 0 0 0 (330) GLN361 0 0 0 0 0 0 2 prot.sequence srvivhvdldcfYaqvemisnpelkdkplgvqQkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirrysgresrQcpipshviqklnydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >3qe9_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (D173A) IN COMPLEX WITH DNA (COMPLEX I) organism=Homo sapiens DNA sequence DT(B1):DA(A20) DC(B2):DG(A19) DG(B3):DC(A18) DA(B4):DT(A17) DC(B5):DG(A16) DT(B6):DA(A15) DA(B7):DT(A14) DG(B8):DC(A13) DC(B9):DG(A12) DG(B10):DC(A11) chainZ ( 3) GLN4 0 0 0 0 0 1 2 0 0 0 ( 35) HIS36 16 0 0 0 0 0 0 0 0 0 ( 39) ILE40 6 0 0 0 0 0 0 0 0 0 (119) THR120 6 0 0 0 0 0 0 0 0 0 (120) ARG121 12 7 9 0 0 0 0 0 0 0 prot.sequence giQgllqfikeasepihvrkykgqvvavdtycwlHkgaIacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearecfTRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsallafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdt >3qea_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH DNA (COMPLEX II) organism=Homo sapiens DNA sequence DT(B1):DA(A20) DC(B2):DG(A19) DG(B3):DC(A18) DA(B4):DT(A17) DC(B5):DG(A16) DT(B6):DA(A15) DA(B7):DT(A14) DG(B8):DC(A13) DC(B9):DG(A12) DG(B10):DC(A11) chainZ ( 3) GLN4 0 0 0 0 2 7 0 0 0 0 ( 35) HIS36 10 0 0 0 0 0 0 0 0 0 ( 39) ILE40 2 0 0 0 0 0 0 0 0 0 (116) GLU117 1 1 0 0 0 0 0 0 0 0 (119) THR120 5 0 0 0 0 0 0 0 0 0 (120) ARG121 10 8 2 0 0 0 0 0 0 0 prot.sequence giQgllqfikeasepihvrkykgqvvavdtycwlHkgaIacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearEcfTRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdta >3qeb_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH DNA AND MN2+ (COMPLEX III) organism=Homo sapiens DNA sequence DC(B2):DG(A19) DG(B3):DC(A18) DA(B4):DT(A17) DC(B5):DG(A16) DT(B6):DA(A15) DA(B7):DT(A14) DG(B8):DC(A13) DC(B9):DG(A12) DG(B10):DC(A11) chainZ ( 3) GLN4 0 0 1 1 0 0 0 0 0 (120) ARG121 1 0 0 0 0 0 0 0 0 prot.sequence giQgllqfikeasepihvrkykgqvvavdtycwlhkgaiacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearecftRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdta >3qei_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (L561A/S565G/Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE DIFLUOROTOLUENE NUCLEOSIDE organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 (734) LYS734 0 0 0 0 0 0 0 0 1 1 0 0 (800) LYS800 0 0 0 0 1 2 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3qep_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (L561A/S565G/Y567A) TERNARY COMPLEX WITH DTTP OPPOSITE DIFLUOROTOLUENE NUCLEOSIDE organism=Enterobacteria phage RB69 DNA sequence DG(T5):DOC(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 0 7 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3qer_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (L561A/S565G/Y567A) TERNARY COMPLEX WITH DATP OPPOSITE DIFLUOROTOLUENE NUCLEOSIDE organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 7 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqnrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3qes_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (L561A/S565G/Y567A) TERNARY COMPLEX WITH DGTP OPPOSITE DIFLUOROTOLUENE NUCLEOSIDE organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfd >3qet_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (L561A/S565G/Y567A) TERNARY COMPLEX WITH DTTP OPPOSITE DT organism=Enterobacteria phage RB69 DNA sequence DT(T4):TTP(A904) DG(T5):DOC(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (411) ASP411 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) THR413 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) SER414 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) LEU415 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) ARG482 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) LYS486 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (560) LYS560 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (564) ASN564 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (623) ASP623 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 0 7 6 0 0 0 0 0 0 0 0 0 0 (707) ARG707 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKRyalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3qev_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (L561A/S565G/Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE DT organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3qew_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (L561A/S565G/Y567A) TERNARY COMPLEX WITH DDTP OPPOSITE DT organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 7 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3qex_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (L561A/S565G/Y567A) TERNARY COMPLEX WITH DGTP OPPOSITE DT organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3qfq_ABE:Origin_of_replication-binding_domain,_RBD-like; title=ASYMMETRIC ASSEMBLY OF MERKEL CELL POLYOMAVIRUS LARGE T-ANTIGEN ORIGIN BINDING DOMAINS AT THE VIRAL ORIGIN organism=Merkel cell polyomavirus DNA sequence DG(C2):DC(W26) DG(C3):DC(W25) DA(C4):DT(W24) DG(C5):DC(W23) DG(C6):DC(W22) DC(C7):DG(W21) DT(C8):DA(W20) DA(C9):DT(W19) DG(C10):DC(W18) DG(C11):DC(W17) DA(C12):DT(W16) DG(C13):DC(W15) DC(C14):DG(W14) DC(C15):DG(W13) DC(C16):DG(W12) DC(C17):DG(W11) DA(C18):DT(W10) DA(C19):DT(W9) DG(C20):DC(W8) DC(C21):DG(W7) DC(C22):DG(W6) DT(C23):DA(W5) DC(C24):DG(W4) DT(C25):DA(W3) DG(C26):DC(W2) chainA ( 21) SER329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 ( 22) ASN330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 13 0 0 0 0 ( 23) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 5 0 0 ( 24) THR332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 ( 72) ARG380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 13 0 0 0 0 0 0 chainB ( 21) SER329 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ASN330 0 0 0 15 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LYS331 3 9 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) THR332 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG380 0 0 0 0 0 14 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 19) SER329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 ( 20) ASN330 0 0 0 0 0 0 0 0 0 0 0 3 7 14 0 0 0 0 0 0 0 0 0 0 0 ( 21) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 7 0 0 0 0 0 0 0 0 0 ( 22) THR332 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG380 0 0 0 0 0 0 0 0 0 0 19 8 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpvptdfpidlsdylshavySNKTvscfaiyttsdkaielydkiekfkvdfksrhacelgcillfitlskhRvsaiknfcstfctisflickgvnkmpemynnlckppykllqenkpll/tpvptdfpidlsdylshavySNKTvscfaiyttsdkaielydkiekfkvdfksrhacelgcillfitlskhRvsaiknfcstfctisflickgvnkmpemynnlckppykllqenkplln/vptdfpidlsdylshavySNKTvscfaiyttsdkaielydkiekfkvdfksrhacelgcillfitlskhRvsaiknfcstfctisflickgvnkmpemynnlckppykllqenkpll >3qfq_B:Origin_of_replication-binding_domain,_RBD-like; title=ASYMMETRIC ASSEMBLY OF MERKEL CELL POLYOMAVIRUS LARGE T-ANTIGEN ORIGIN BINDING DOMAINS AT THE VIRAL ORIGIN organism=Merkel cell polyomavirus DNA sequence DG(C2):DC(W26) DG(C3):DC(W25) DA(C4):DT(W24) DG(C5):DC(W23) DG(C6):DC(W22) DC(C7):DG(W21) DT(C8):DA(W20) DA(C9):DT(W19) DG(C10):DC(W18) DG(C11):DC(W17) DA(C12):DT(W16) DG(C13):DC(W15) DC(C14):DG(W14) DC(C15):DG(W13) DC(C16):DG(W12) DC(C17):DG(W11) DA(C18):DT(W10) DA(C19):DT(W9) DG(C20):DC(W8) DC(C21):DG(W7) DC(C22):DG(W6) DT(C23):DA(W5) DC(C24):DG(W4) DT(C25):DA(W3) DG(C26):DC(W2) chainB ( 21) SER329 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ASN330 0 0 0 15 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LYS331 3 9 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) THR332 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG380 0 0 0 0 0 14 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpvptdfpidlsdylshavySNKTvscfaiyttsdkaielydkiekfkvdfksrhacelgcillfitlskhRvsaiknfcstfctisflickgvnkmpemynnlckppykllqenkplln >3qi5_A:FMT_C-terminal_domain-like; title=CRYSTAL STRUCTURE OF HUMAN ALKYLADENINE DNA GLYCOSYLASE IN COMPLEX WITH 3,N4-ETHENOCYSTOSINE CONTAINING DUPLEX DNA organism=Homo sapiens DNA sequence DG(D14):DC(C12) DG(D15):DC(C11) DC(D16):DG(C10) DA(D17):DT(C9) DA(D18):DT(C8) DG(D19):EDC(C7) DC(D20):DG(C6) DA(D21):DT(C5) DT(D22):DA(C4) DG(D23):DC(C3) DT(D24):DA(C2) DC(D25):DG(C1) chainA ( 48) TYR127 0 0 0 0 0 40 0 0 0 0 0 0 ( 56) ALA135 0 0 0 0 0 1 0 0 0 0 0 0 ( 57) HIS136 0 0 0 0 0 21 0 0 0 0 0 0 ( 70) MET149 0 0 0 0 0 3 0 0 0 0 0 0 ( 78) TYR157 0 0 0 0 0 4 0 0 0 0 0 0 ( 80) TYR159 0 0 0 0 0 15 0 0 0 0 0 0 ( 83) TYR162 0 0 0 0 100 1 22 0 0 0 0 0 ( 86) TYR165 0 0 0 0 6 0 0 0 0 0 0 0 ( 90) ASN169 0 0 0 0 0 10 0 0 0 0 0 0 ( 99) CYS178 0 0 0 0 0 2 0 0 0 0 0 0 (101) LEU180 0 0 0 0 0 5 0 0 0 0 0 0 (180) VAL264 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence gphmtrlgleffdqpavplaraflgqvlvrrlpngtelrgriveteaylgpedeaahsrggrqtprnrgmfmkpgtlyvyiiYgmYfcmnissqgdgacvllraleplegletmrqlrstlrkvlkdrelcsgpsklcqalainksfdqrdlaqdeavwlergplepsepavvaaarvgvewarkplrfyvrgspwvsvvdrvaeq >3qlp_H:Trypsin-like_serine_proteases; title=X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA THROMBIN AND A MODIFIED THROMBIN BINDING APTAMER (MTBA) organism=HOMO SAPIENS DNA sequence DG(D1):DG(D15) DG(D2):DG(D5) DT(D3) DT(D4) DG(D6):DG(D10) DT(D9) DG(D8) DT(D7) DG(D11):DG(D14) DT(D12) DT(D13) chainH ( 9) ILE24 0 0 0 0 0 0 0 0 0 4 0 ( 24) GLN38 0 0 1 0 0 0 0 0 0 0 0 ( 60) LEU65 0 0 6 0 0 0 0 0 0 0 0 ( 66) HIS71 0 0 0 0 0 0 0 0 0 2 0 ( 70) ARG75 0 18 0 6 0 0 0 0 7 3 8 ( 71) TYR76 0 0 0 16 0 0 0 0 0 0 0 ( 72) GLU77 0 0 0 0 0 0 0 0 0 13 0 ( 73) ARG77A 0 12 0 12 0 0 0 0 9 0 5 ( 74) ASN78 0 0 0 0 0 0 0 0 0 0 1 ( 75) ILE79 0 0 0 0 0 0 0 0 0 7 6 ( 78) ILE82 0 0 9 0 0 0 0 0 0 0 0 prot.sequence ivegsdaeIgmspwqvmlfrkspQellcgaslisdrwvltaahcllyppwdknftendlLvrigkHsrtRYeRNIekIsmlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfge >3qmb_A: title=STRUCTURAL BASIS OF SELECTIVE BINDING OF NONMETHYLATED CPG ISLANDS BY THE CXXC DOMAIN OF CFP1 organism=HOMO SAPIENS DNA sequence DG(B1):DC(C12) DC(B2):DG(C11) DC(B3):DG(C10) DA(B4):DT(C9) DC(B5):DG(C8) DC(B6):DG(C7) DG(B7):DC(C6) DG(B8):DC(C5) DT(B9):DA(C4) DG(B10):DC(C3) DG(B11):DC(C2) DC(B12):DG(C1) chainA ( 36) ILE203 0 0 0 0 1 0 0 0 0 0 0 0 ( 37) ARG204 0 0 0 0 0 6 14 15 1 0 0 0 ( 38) GLN205 0 0 0 0 2 5 8 0 0 0 0 0 ( 50) ARG217 0 0 0 3 11 8 0 0 0 0 0 0 ( 53) TYR220 0 0 0 0 2 1 0 0 0 0 0 0 prot.sequence rsarmcgeceacrrtedcghcdfcrdmkkfggpnkIRQkcrlrqcqlraResYk >3qmc_A: title=STRUCTURAL BASIS OF SELECTIVE BINDING OF NONMETHYLATED CPG ISLANDS BY THE CXXC DOMAIN OF CFP1 organism=Homo sapiens DNA sequence DG(C1):DC(B12) DC(C2):DG(B11) DC(C3):DG(B10) DA(C4):DT(B9) DG(C5):DC(B8) DC(C6):DG(B7) DG(C7):DC(B6) DG(C8):DC(B5) DT(C9):DA(B4) DG(C10):DC(B3) DG(C11):DC(B2) DC(C12):DG(B1) chainA ( 35) ILE203 0 0 0 0 0 0 0 1 0 0 0 0 ( 36) ARG204 0 0 0 0 12 18 18 0 0 0 0 0 ( 37) GLN205 0 0 0 0 0 6 5 3 0 0 0 0 ( 49) ARG217 0 0 0 0 0 0 8 12 2 0 0 0 ( 52) TYR220 0 0 0 0 0 0 1 2 0 0 0 0 prot.sequence sarmcgeceacrrtedcghcdfcrdmkkfggpNkIRQkcrlrqcqlraResYk >3qmd_A: title=STRUCTURAL BASIS OF SELECTIVE BINDING OF NONMETHYLATED CPG ISLANDS BY THE CXXC DOMAIN OF CFP1 organism=Homo sapiens DNA sequence DG(B1):DC(C12) DC(B2):DG(C11) DC(B3):DG(C10) DA(B4):DT(C9) DA(B5):DT(C8) DC(B6):DG(C7) DG(B7):DC(C6) DA(B8):DT(C5) DT(B9):DA(C4) DG(B10):DC(C3) DG(B11):DC(C2) DC(B12):DG(C1) chainA ( 33) ASN201 0 0 0 0 0 0 0 1 0 0 0 0 ( 36) ARG204 0 0 0 0 0 12 17 12 0 0 0 0 ( 37) GLN205 0 0 0 0 1 5 7 0 0 0 0 0 ( 49) ARG217 0 0 0 0 4 2 0 0 0 0 0 0 ( 52) TYR220 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence sarmcgeceacrrtedcghcdfcrdmkkfggpNkiRQkcrlrqcqlraResYk >3qmg_A: title=STRUCTURAL BASIS OF SELECTIVE BINDING OF NON-METHYLATED CPG ISLANDS BY THE CXXC DOMAIN OF CFP1 organism=Homo sapiens DNA sequence DG(C1):DC(B12) DC(C2):DG(B11) DC(C3):DG(B10) DA(C4):DT(B9) DC(C5):DG(B8) DC(C6):DG(B7) DG(C7):DC(B6) DT(C8):DA(B5) DT(C9):DA(B4) DG(C10):DC(B3) DG(C11):DC(B2) DC(C12):DG(B1) chainA ( 34) ILE199 0 0 0 0 1 0 0 0 0 0 0 0 ( 35) ARG200 0 0 0 0 0 13 14 10 0 0 0 0 ( 36) GLN201 0 0 0 0 2 5 6 0 0 0 0 0 ( 48) ARG213 0 0 0 0 10 7 0 0 0 0 0 0 ( 51) TYR216 0 0 0 0 2 1 0 0 0 0 0 0 prot.sequence armcgeceacrrtedcghcdfcrdmkkfggpnkIRQkcrlrqcqlraResYk >3qmh_A: title=STRUCTURAL BASIS OF SELECTIVE BINDING OF NON-METHYLATED CPG ISLANDS (DNA-TCGA) BY THE CXXC DOMAIN OF CFP1 organism=HOMO SAPIENS DNA sequence DG(B1):DC(C12) DC(B2):DG(C11) DC(B3):DG(C10) DA(B4):DT(C9) DT(B5):DA(C8) DC(B6):DG(C7) DG(B7):DC(C6) DA(B8):DT(C5) DT(B9):DA(C4) DG(B10):DC(C3) DG(B11):DC(C2) DC(B12):DG(C1) chainA ( 32) ASN197 0 0 0 0 1 0 0 0 0 0 0 0 ( 34) ILE199 0 0 0 0 0 0 0 2 0 0 0 0 ( 35) ARG200 0 0 0 0 12 15 13 0 0 0 0 0 ( 36) GLN201 0 0 0 0 0 5 5 5 0 0 0 0 ( 48) ARG213 0 0 0 0 0 0 6 7 0 0 0 0 ( 51) TYR216 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence armcgeceacrrtedcghcdfcrdmkkfggpNkIRQkcrlrqcqlraResYky >3qmi_A: title=STRUCTURAL BASIS OF SELECTIVE BINDING OF NON-METHYLATED CPG ISLANDS (DNA-ACGT) BY THE CXXC DOMAIN OF CFP1 organism=HOMO SAPIENS DNA sequence DG(C1):DC(B12) DC(C2):DG(B11) DC(C3):DG(B10) DA(C4):DT(B9) DA(C5):DT(B8) DC(C6):DG(B7) DG(C7):DC(B6) DT(C8):DA(B5) DT(C9):DA(B4) DG(C10):DC(B3) DG(C11):DC(B2) DC(C12):DG(B1) chainA ( 35) ARG200 0 0 0 0 0 15 12 10 0 0 0 0 ( 36) GLN201 0 0 0 0 1 5 6 0 0 0 0 0 ( 48) ARG213 0 0 0 0 4 3 0 0 0 0 0 0 ( 51) TYR216 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence armcgeceacrrtedcghcdfcrdmkkfggpNkiRQkcrlrqcqlraResYk >3qnn_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DGT OPPOSITE 3TCO organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 7 5 0 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3qno_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DATP OPPOSITE 3TCO organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 7 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3qoq_ABCD:Ribbon-helix-helix; title=CRYSTAL STRUCTURE OF THE TRANSCRIPTION FACTOR AMRZ IN COMPLEX WITH THE 18 BASE PAIR AMRZ1 BINDING SITE organism=Pseudomonas aeruginosa DNA sequence DT(F19):DA(E18) DG(F20):DC(E17) DC(F21):DG(E16) DC(F22):DG(E15) DG(F23):DC(E14) DG(F24):DC(E13) DC(F25):DG(E12) DG(F26):DC(E11) DT(F27):DA(E10) DT(F28):DA(E9) DT(F29):DA(E8) DT(F30):DA(E7) DG(F31):DC(E6) DC(F32):DG(E5) DC(F33):DG(E4) DA(F34):DT(E3) DG(F35):DC(E2) DT(F36):DA(E1) chainA ( 4) SER13 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 9) LYS18 0 0 0 3 10 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL20 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 5) VAL20 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG22 0 0 0 0 0 8 9 14 0 0 0 0 0 0 0 0 0 0 chainC ( 4) SER13 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 ( 9) LYS18 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 5 0 0 ( 11) VAL20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 chainD ( 5) VAL20 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 ( 7) ARG22 0 0 0 0 0 0 0 0 0 0 0 13 10 8 0 0 0 0 prot.sequence tysSrtadKfVvrlpegmreqiaevarshhrsmnseiiarleqsllqega/adkfVvRlpegmreqiaevarshhrsmnseiiarleqsllqega/tysSrtadKfVvrlpegmreqiaevarshhrsmnseiiarleqsllqeg/adkfVvRlpegmreqiaevarshhrsmnseiiarleqsllqegalqdn >3qoq_B:Ribbon-helix-helix; title=CRYSTAL STRUCTURE OF THE TRANSCRIPTION FACTOR AMRZ IN COMPLEX WITH THE 18 BASE PAIR AMRZ1 BINDING SITE organism=Pseudomonas aeruginosa DNA sequence DA(E1):DT(F36) DC(E2):DG(F35) DT(E3):DA(F34) DG(E4):DC(F33) DG(E5):DC(F32) DC(E6):DG(F31) DA(E7):DT(F30) DA(E8):DT(F29) DA(E9):DT(F28) DA(E10):DT(F27) DC(E11):DG(F26) DG(E12):DC(F25) DC(E13):DG(F24) DC(E14):DG(F23) DG(E15):DC(F22) DG(E16):DC(F21) DC(E17):DG(F20) DA(E18):DT(F19) chainB ( 5) VAL20 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 ( 7) ARG22 0 0 0 0 0 0 0 0 0 0 14 9 8 0 0 0 0 0 prot.sequence adkfVvRlpegmreqiaevarshhrsmnseiiarleqsllqega >3qqy_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF A NOVEL LAGLIDADG HOMING ENDONUCLEASE, I-ONUI (FROM OPHIOSTOMA NOVO-ULMI SUBSP. AMERICANA) organism=Ophiostoma novo-ulmi subsp. americana DNA sequence DG(C1):DC(B25) DG(C2):DC(B24) DT(C3):DA(B23) DA(C4):DT(B22) DA(C5):DT(B21) DA(C6):DT(B20) DA(C7):DT(B19) DG(C8):DC(B18) DG(C9):DC(B17) DT(C10):DA(B16) DT(C11):DA(B15) DG(C12):DC(B14) DA(C13):DT(B13) DA(C14):DT(B12) DT(C15):DA(B11) DA(C16):DT(B10) DA(C17):DT(B9) DG(C18):DC(B8) DT(C19):DA(B7) DG(C20):DC(B6) DG(C21):DC(B5) DA(C22):DT(B4) DA(C23):DT(B3) DA(C24):DT(B2) DG(C25):DC(B1) chainA ( 23) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 27) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 12 2 0 0 0 0 ( 29) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 3 0 0 0 ( 31) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 33) LYS34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 ( 34) SER35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 39) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 41) GLU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 47) THR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 ( 71) SER72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 75) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 79) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (176) CYS180 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) PHE182 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ASN184 0 0 0 0 0 1 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) ILE186 0 0 0 0 2 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) GLN195 0 0 0 16 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) GLN197 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) THR203 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) TYR223 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) LYS225 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) LYS227 0 0 0 0 0 0 0 3 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS229 0 0 0 0 0 0 0 0 0 0 4 8 6 0 0 0 0 0 0 0 0 0 0 0 0 (228) PHE232 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (230) TRP234 0 0 0 0 0 0 0 0 0 6 6 24 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) THR240 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aymsrresinpwiltgfadaegSfllRiRnNnKSsvgyStElgfQiTlhnkdksileniqstwkvgvianSgdnAvSlKvtrfedlkviidhfekyplitqklgdymlfkqafcvmenkehlkingikelvrikaklnwgltdelkkafpeiisslinknipnfkwlagftsgegCfFvNlIksksklgvQvQlvfsiTqhikdknlmnslitylgcgYiKeKnKseFsWlDfvvTkfsdindkiipvfqentligvkledfedwckvaklieekkhltesgldeikkiklnmnkgrvf >3qrf_G:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF A DOMAIN-SWAPPED FOXP3 DIMER organism=HOMO SAPIENS DNA sequence DC(D5003):DG(C4021) DT(D5004):DA(C4020) DA(D5005):DT(C4019) DT(D5006):DA(C4018) DG(D5007):DC(C4017) DA(D5008):DT(C4016) DA(D5009):DT(C4015) DA(D5010):DT(C4014) DC(D5011):DG(C4013) DA(D5012):DT(C4012) DA(D5013):DT(C4011) DA(D5014):DT(C4010) DT(D5015):DA(C4009) DT(D5016):DA(C4008) DT(D5017):DA(C4007) DT(D5018):DA(C4006) DC(D5019):DG(C4005) DC(D5020):DG(C4004) DT(D5021):DA(C4003) chainG ( 51) ARG386 0 0 0 0 0 0 0 2 15 18 0 0 0 0 0 0 0 0 0 ( 52) HIS387 0 0 0 0 4 7 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) SER390 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrppftyatlirwaileapekqrtlneiyhwftrmfaffrnhpatwknaiRHnlSlhkcfvrvesekgavwtvdelefrkkr >3qsv_AD:SMAD_MH1_domain; title=STRUCTURAL BASIS FOR DNA RECOGNITION BY CONSTITUTIVE SMAD4 MH1 DIMERS organism=Mus musculus DNA sequence DT(E1000):DA(F2015) DG(E1001):DC(F2014) DC(E1002):DG(F2013) DA(E1003):DT(F2012) DG(E1004):DC(F2011) DT(E1005):DA(F2010) DC(E1006):DG(F2009) DT(E1007):DA(F2008) DA(E1008):DT(F2007) DG(E1009):DC(F2006) DA(E1010):DT(F2005) DC(E1011):DG(F2004) DT(E1012):DA(F2003) DG(E1013):DC(F2002) DC(E1014):DG(F2001) DA(E1015):DT(F2000) chainA ( 72) ARG81 0 0 0 0 0 0 0 0 0 0 2 10 2 0 0 0 ( 74) GLN83 0 0 0 0 0 0 0 5 13 4 0 0 0 0 0 0 ( 79) LYS88 0 0 0 0 0 0 0 0 4 7 4 0 0 0 0 0 chainD ( 70) ARG81 0 0 0 3 10 2 0 0 0 0 0 0 0 0 0 0 ( 72) GLN83 0 0 0 0 0 0 2 8 6 0 0 0 0 0 0 0 ( 77) LYS88 0 0 0 0 0 7 7 5 0 0 0 0 0 0 0 0 prot.sequence ptsndaclsivhslmchrqggesetfakraieslvkklkekkdeldslitaittngahpskcvtiqrtldgRlQvagrKgfphviyarlwrwpdlhknelkhvkycqyafdlkcdsvcvnpyhyervvs/sndaclsivhslmchrqggesetfakraieslvkklkekkdeldslitaittngahpskcvtiqrtldgRlQvagrKgfphviyarlwrwpdlhknelkhvkycqyafdlkcdsvcvnpyhyerv >3qsv_BC:SMAD_MH1_domain; title=STRUCTURAL BASIS FOR DNA RECOGNITION BY CONSTITUTIVE SMAD4 MH1 DIMERS organism=Mus musculus DNA sequence DT(H2000):DA(G1015) DG(H2001):DC(G1014) DC(H2002):DG(G1013) DA(H2003):DT(G1012) DG(H2004):DC(G1011) DT(H2005):DA(G1010) DC(H2006):DG(G1009) DT(H2007):DA(G1008) DA(H2008):DT(G1007) DG(H2009):DC(G1006) DA(H2010):DT(G1005) DC(H2011):DG(G1004) DT(H2012):DA(G1003) DG(H2013):DC(G1002) DC(H2014):DG(G1001) DA(H2015):DT(G1000) chainB ( 72) ARG81 0 0 0 4 11 2 0 0 0 0 0 0 0 0 0 0 ( 74) GLN83 0 0 0 0 0 0 2 9 4 0 0 0 0 0 0 0 ( 79) LYS88 0 0 0 0 0 3 7 4 0 0 0 0 0 0 0 0 chainC ( 69) ARG81 0 0 0 0 0 0 0 0 0 0 2 10 3 0 0 0 ( 71) GLN83 0 0 0 0 0 0 0 5 8 2 0 0 0 0 0 0 ( 76) LYS88 0 0 0 0 0 0 0 0 5 7 8 1 0 0 0 0 prot.sequence ptsndaclsivhslmchrqggesetfakraieslvkklkekkdeldslitaittngahpskcvtiqrtldgRlQvagrKgfphviyarlwrwpdlhknelkhvkycqyafdlkcdsvcvnpyhyervvs/ndaclsivhslmchrqggesetfakraieslvkklkekkdeldslitaittngahpskcvtiqrtldgRlQvagrKgfphviyarlwrwpdlhknelkhvkycqyafdlkcdsvcvnpyhyerv >3qsv_D:SMAD_MH1_domain; title=STRUCTURAL BASIS FOR DNA RECOGNITION BY CONSTITUTIVE SMAD4 MH1 DIMERS organism=Mus musculus DNA sequence DT(E1000):DA(F2015) DG(E1001):DC(F2014) DC(E1002):DG(F2013) DA(E1003):DT(F2012) DG(E1004):DC(F2011) DT(E1005):DA(F2010) DC(E1006):DG(F2009) DT(E1007):DA(F2008) DA(E1008):DT(F2007) DG(E1009):DC(F2006) DA(E1010):DT(F2005) DC(E1011):DG(F2004) DT(E1012):DA(F2003) DG(E1013):DC(F2002) DC(E1014):DG(F2001) DA(E1015):DT(F2000) chainD ( 70) ARG81 0 0 0 3 10 2 0 0 0 0 0 0 0 0 0 0 ( 72) GLN83 0 0 0 0 0 0 2 8 6 0 0 0 0 0 0 0 ( 77) LYS88 0 0 0 0 0 7 7 5 0 0 0 0 0 0 0 0 prot.sequence sndaclsivhslmchrqggesetfakraieslvkklkekkdeldslitaittngahpskcvtiqrtldgRlQvagrKgfphviyarlwrwpdlhknelkhvkycqyafdlkcdsvcvnpyhyerv >3qx3_B:Type_II_DNA_topoisomerase; title=HUMAN TOPOISOMERASE IIBETA IN COMPLEX WITH DNA AND ETOPOSIDE organism=Homo sapiens DNA sequence DG(D13):DC(E8) DC(D14):DG(E7) DT(D15):DA(E6) DC(D16):DG(E5) DG(D17):DC(E4) DG(D18):DC(E3) DC(D19):DG(E2) DT(D20):DA(E1) chainB ( 57) LYS505 2 4 0 0 0 0 0 0 (277) ALA779 0 1 0 0 0 0 0 0 (368) GLU870 0 0 0 0 1 0 0 0 (370) ILE872 0 0 0 18 21 0 0 0 (375) ALA877 0 0 0 0 1 0 0 0 prot.sequence skikgipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplRgKilnvreashkqimenaEinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitpakeakeyfadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlhgtkhltyndfinkelilfsnsDneRSipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeqAlmMtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspryiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaEgIgtgwAcKlpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqgpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >3qym_ACDEFH:p53-like_transcription_factors; title=STRUCTURE OF P63 DNA BINDING DOMAIN IN COMPLEX WITH A 10 BASE PAIR A/T RICH RESPONSE ELEMENT HALF SITE organism=Homo sapiens DNA sequence DA(I1):DT(J10) DA(I2):DT(J9) DA(I3):DT(J8) DC(I4):DG(J7) DA(I5):DT(J6) DT(I6):DA(J5) DG(I7):DC(J4) DT(I8):DA(J3) DT(I9):DA(J2) DT(I10):DA(J1) DA(K1):DT(L10) DA(K2):DT(L9) DA(K3):DT(L8) DC(K4):DG(L7) DA(K5):DT(L6) DT(K6):DA(L5) DG(K7):DC(L4) DT(K8):DA(L3) DT(K9):DA(L2) DT(K10):DA(L1) DA(M1):DT(N10) DA(M2):DT(N9) DA(M3):DT(N8) DC(M4):DG(N7) DA(M5):DT(N6) DT(M6):DA(N5) DG(M7):DC(N4) DT(M8):DA(N3) DT(M9):DA(N2) DT(M10):DA(N1) DA(O1):DT(P10) DA(O2):DT(P9) DA(O3):DT(P8) DC(O4):DG(P7) DA(O5):DT(P6) DT(O6):DA(P5) DG(O7):DC(P4) DT(O8):DA(P3) DT(O9):DA(P2) DT(O10):DA(P1) chainA (179) ALA307 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) CYS308 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ARG311 0 0 0 0 0 14 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (182) ALA307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) CYS308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (183) ALA307 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS308 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 2 14 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (183) ALA307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 1 0 0 0 0 0 0 0 0 0 0 0 0 chainF (182) ALA307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) CYS308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (176) ALA307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (177) CYS308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (180) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 14 0 0 0 0 0 prot.sequence spsntdypgphsfdvsfqtaksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi/spsntdypgphsfdvsfqqsstaksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi/aspsntdypgphsfdvsfqqsstaksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi/aspsntdypgphsfdvsfqqsstaksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsir/spsntdypgphsfdvsfqqsstaksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi/psntdypgphsfdvsfqqsatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi >3qym_C:p53-like_transcription_factors; title=STRUCTURE OF P63 DNA BINDING DOMAIN IN COMPLEX WITH A 10 BASE PAIR A/T RICH RESPONSE ELEMENT HALF SITE organism=Homo sapiens DNA sequence DA(P1):DT(O10) DA(P2):DT(O9) DA(P3):DT(O8) DC(P4):DG(O7) DA(P5):DT(O6) DT(P6):DA(O5) DG(P7):DC(O4) DT(P8):DA(O3) DT(P9):DA(O2) DT(P10):DA(O1) DA(N1):DT(M10) DA(N2):DT(M9) DA(N3):DT(M8) DC(N4):DG(M7) DA(N5):DT(M6) DT(N6):DA(M5) DG(N7):DC(M4) DT(N8):DA(M3) DT(N9):DA(M2) DT(N10):DA(M1) DA(L1):DT(K10) DA(L2):DT(K9) DA(L3):DT(K8) DC(L4):DG(K7) DA(L5):DT(K6) DT(L6):DA(K5) DG(L7):DC(K4) DT(L8):DA(K3) DT(L9):DA(K2) DT(L10):DA(K1) DA(J1):DT(I10) DA(J2):DT(I9) DA(J3):DT(I8) DC(J4):DG(I7) DA(J5):DT(I6) DT(J6):DA(I5) DG(J7):DC(I4) DT(J8):DA(I3) DT(J9):DA(I2) DT(J10):DA(I1) chainC (182) ALA307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) CYS308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spsntdypgphsfdvsfqqsstaksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi >3qyn_ABCD:p53-like_transcription_factors; title=STRUCTURE OF P63 DNA BINDING DOMAIN IN COMPLEX WITH A 22 BASE PAIR A/T RICH RESPONSE ELEMENT CONTAINING 2 BASE PAIR SPACER BETWEEN HALF SITES organism=Homo sapiens DNA sequence DA(E1):DT(F22) DA(E2):DT(F21) DA(E3):DT(F20) DC(E4):DG(F19) DA(E5):DT(F18) DT(E6):DA(F17) DG(E7):DC(F16) DT(E8):DA(F15) DT(E9):DA(F14) DT(E10):DA(F13) DT(E11):DA(F12) DA(E12):DT(F11) DA(E13):DT(F10) DA(E14):DT(F9) DA(E15):DT(F8) DC(E16):DG(F7) DA(E17):DT(F6) DT(E18):DA(F5) DG(E19):DC(F4) DT(E20):DA(F3) DT(E21):DA(F2) DT(E22):DA(F1) chainA (182) ALA307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (183) CYS308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (186) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 2 0 0 chainB (178) ALA307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (179) CYS308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (182) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 12 0 0 0 0 0 chainC (183) ALA307 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS308 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG311 0 0 1 12 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (177) ALA307 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) CYS308 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG311 0 0 0 0 0 10 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spsntdypgphsfdvsfqqsstaksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi/maspsntdypgphsfdvsfqsatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsirk/aspsntdypgphsfdvsfqqsstaksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi/maspsntdypgphsfdvsfqatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi >3qyn_C:p53-like_transcription_factors; title=STRUCTURE OF P63 DNA BINDING DOMAIN IN COMPLEX WITH A 22 BASE PAIR A/T RICH RESPONSE ELEMENT CONTAINING 2 BASE PAIR SPACER BETWEEN HALF SITES organism=Homo sapiens DNA sequence DA(E1):DT(F22) DA(E2):DT(F21) DA(E3):DT(F20) DC(E4):DG(F19) DA(E5):DT(F18) DT(E6):DA(F17) DG(E7):DC(F16) DT(E8):DA(F15) DT(E9):DA(F14) DT(E10):DA(F13) DT(E11):DA(F12) DA(E12):DT(F11) DA(E13):DT(F10) DA(E14):DT(F9) DA(E15):DT(F8) DC(E16):DG(F7) DA(E17):DT(F6) DT(E18):DA(F5) DG(E19):DC(F4) DT(E20):DA(F3) DT(E21):DA(F2) DT(E22):DA(F1) chainC (183) ALA307 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS308 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG311 0 0 1 12 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aspsntdypgphsfdvsfqqsstaksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi >3qz7_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=T-3 TERNARY COMPLEX OF DPO4 organism=Sulfolobus solfataricus DNA sequence DC(T7):DG(P13) DT(T8):DG(P12) DC(T9):DG(P11) DG(T10):DC(P10) DA(T11):DT(P9) DT(T12):DA(P8) DC(T13):DG(P7) DA(T14):DT(P6) DG(T15):DC(P5) DT(T16):DA(P4) DG(T17):DC(P3) DC(T18):DG(P2) DC(T19):DG(P1) chainA ( 82) GLN82 0 22 0 0 0 0 0 0 0 0 0 0 0 ( 86) SER86 0 1 0 0 0 0 0 0 0 0 0 0 0 (242) ARG242 0 11 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyQqvsSrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvRksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvrfskfi >3qz8_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TT-4 TERNARY COMPLEX OF DPO4 organism=Sulfolobus solfataricus DNA sequence DC(T7):DG(P13) DT(T8):DG(P12) DT(T9):DA(P11) DG(T10):DC(P10) DA(T11):DT(P9) DT(T12):DA(P8) DC(T13):DG(P7) DA(T14):DT(P6) DG(T15):DC(P5) DT(T16):DA(P4) DG(T17):DC(P3) DC(T18):DG(P2) DC(T19):DG(P1) chainA ( 82) GLN82 0 0 5 0 0 0 0 0 0 0 0 0 0 (101) ILE101 0 0 3 0 0 0 0 0 0 0 0 0 0 (104) ILE104 0 0 4 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyQqvssrimnllreysekieIasIdeayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3r7p_A:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-LTRI organism=Leptographium truncatum DNA sequence DG(B1):DC(E27) DG(B2):DC(E26) DT(B3):DA(E25) DC(B4):DG(E24) DT(B5):DA(E23) DA(B6):DT(E22) DA(B7):DT(E21) DA(B8):DT(E20) DC(B9):DG(E19) DG(B10):DC(E18) DT(B11):DA(E17) DC(B12):DG(E16) DG(B13):DC(D15) DT(B14):DA(D14) DA(B15):DT(D13) DT(B16):DA(D12) DA(C17):DT(D11) DG(C18):DC(D10) DG(C19):DC(D9) DA(C20):DT(D8) DG(C21):DC(D7) DC(C22):DG(D6) DA(C23):DT(D5) DT(C24):DA(D4) DT(C25):DA(D3) DT(C26):DA(D2) DG(C27):DC(D1) chainA ( 17) SER31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 19) MET33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 21) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 23) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 ( 35) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 18 0 0 0 0 ( 37) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 11 0 0 0 0 0 0 ( 39) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 13 1 0 0 0 0 0 0 0 ( 67) ASP81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 8 0 0 0 0 0 0 0 0 ( 71) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 ( 73) GLU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 (172) SER186 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) TYR188 0 0 0 0 0 0 0 0 0 16 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ARG190 0 0 0 0 0 0 6 16 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ALA192 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ASN194 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) THR196 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) LEU197 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) GLN202 0 0 0 0 11 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) GLN204 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) GLN208 0 0 0 0 0 0 0 0 0 1 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) THR210 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) ARG232 0 0 0 0 0 0 0 0 6 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) ARG234 0 0 0 0 0 0 0 0 0 0 11 14 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) CYS246 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) THR252 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dnispwtitgfadaesSfMlTvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagegSfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRktCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrsl >3r8f_ABCD:P-loop_containing_nucleoside_triphosphate_hydrolases;TrpR-like; title=REPLICATION INITIATOR DNAA BOUND TO AMPPCP AND SINGLE-STRANDED DNA organism=Aquifex aeolicus DNA sequence DA(E1) DA(E2) DA(E3) DA(E4) DA(E5) DA(E6) DA(E7) DA(E8) DA(E9) DA(E10) DA(E11) DA(E12) chainA ( 80) VAL156 0 0 0 0 0 0 0 0 0 2 0 0 chainB ( 80) VAL156 0 0 0 0 0 0 3 0 0 0 0 0 chainC ( 80) VAL156 0 0 0 4 0 0 0 0 0 0 0 0 ( 84) LYS160 0 0 0 4 0 0 0 0 0 0 0 0 chainD ( 80) VAL156 3 0 0 0 0 0 0 0 0 0 0 0 ( 84) LYS160 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dflnpkytlenfivgegnrlayevvkealenlgslynpifiygsvgtgkthllqaagneakkrgyrviyssaddfaqamVehlkkgtinefrnmyksvdllllddvqflsgkertqieffhifntlyllekqiilasdrhpqkldgvsdrlvsrfeggilveieldnktrfkiikeklkefnlelrkevidyllentknvreiegkikliklkgfeglerkerkerdklmqivefvanyyavkvedilsdknkrtsearkiamylcrkvcsaslieiarafkrkdhttvihairsveeekrkfkhlvgflekqafdkic/dflnpkytlenfivgegnrlayevvkealenlgslynpifiygsvgtgkthllqaagneakkrgyrviyssaddfaqamVehlkkgtinefrnmyksvdllllddvqflsgkertqieffhifntlyllekqiilasdrhpqkldgvsdrlvsrfeggilveieldnktrfkiikeklkefnlelrkevidyllentknvreiegkikliklkgfeglerkerkerdklmqivefvanyyavkvedilsdknkrtsearkiamylcrkvcsaslieiarafkrkdhttvihairsveeekrkfkhlvgflekqafdkic/dflnpkytlenfivgegnrlayevvkealenlgslynpifiygsvgtgkthllqaagneakkrgyrviyssaddfaqamVehlKkgtinefrnmyksvdllllddvqflsgkertqieffhifntlyllekqiilasdrhpqkldgvsdrlvsrfeggilveieldnktrfkiikeklkefnlelrkevidyllentknvreiegkikliklkgfeglerkerkerdklmqivefvanyyavkvedilsdknkrtsearkiamylcrkvcsaslieiarafkrkdhttvihairsveeekrkfkhlvgflekqafdkic/dflnpkytlenfivgegnrlayevvkealenlgslynpifiygsvgtgkthllqaagneakkrgyrviyssaddfaqamVehlKkgtinefrnmyksvdllllddvqflsgkertqieffhifntlyllekqiilasdrhpqkldgvsdrlvsrfeggilveieldnktrfkiikeklkefnlelrkevidyllentknvreiegkikliklkgfeglerkerkerdklmqivefvanyyavkvedilsdknkrtsearkiamylcrkvcsaslieiarafkrkdhttvihairsveeekrkfkhlvgflekqafdkic >3r8f_C:P-loop_containing_nucleoside_triphosphate_hydrolases;TrpR-like; title=REPLICATION INITIATOR DNAA BOUND TO AMPPCP AND SINGLE-STRANDED DNA organism=Aquifex aeolicus DNA sequence DA(E1) DA(E2) DA(E3) DA(E4) DA(E5) DA(E6) DA(E7) DA(E8) DA(E9) DA(E10) DA(E11) DA(E12) chainC ( 80) VAL156 0 0 0 4 0 0 0 0 0 0 0 0 ( 84) LYS160 0 0 0 4 0 0 0 0 0 0 0 0 prot.sequence dflnpkytlenfivgegnrlayevvkealenlgslynpifiygsvgtgkthllqaagneakkrgyrviyssaddfaqamVehlKkgtinefrnmyksvdllllddvqflsgkertqieffhifntlyllekqiilasdrhpqkldgvsdrlvsrfeggilveieldnktrfkiikeklkefnlelrkevidyllentknvreiegkikliklkgfeglerkerkerdklmqivefvanyyavkvedilsdknkrtsearkiamylcrkvcsaslieiarafkrkdhttvihairsveeekrkfkhlvgflekqafdkic >3rad_AC:Type_II_DNA_topoisomerase; title=QUINOLONE(CLINAFLOXACIN)-DNA CLEAVAGE COMPLEX OF TYPE IV TOPOISOMERASE FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DA(F5):DT(E15) DT(F6):DA(E14) DT(F7):DA(E13) DC(F8):DG(E12) DA(F9):DT(E11) DT(F10):DA(E10) DG(F11):DC(E9) chainA ( 77) SER79 1 0 0 0 0 0 0 ( 78) SER80 1 2 0 0 0 0 0 (168) ILE170 0 0 0 14 21 0 0 (173) ALA175 0 0 0 0 1 0 0 chainC ( 45) LYS458 1 1 0 0 0 0 0 prot.sequence niqnmsledimgerfgrYskyiiqdralpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdSSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyAtdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/gkltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykayawtdgeleelrklqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3rad_BD:Type_II_DNA_topoisomerase; title=QUINOLONE(CLINAFLOXACIN)-DNA CLEAVAGE COMPLEX OF TYPE IV TOPOISOMERASE FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DG(H1):DC(F4) DA(H2):DT(F3) DC(H3):DG(F2) DT(H4):DA(F1) DA(H5):DT(G15) DT(H6):DA(G14) DG(H7):DC(G13) DC(H8):DG(G12) DA(H9):DT(G11) DC(H10):DG(G10) DG(H11):DC(G9) chainB ( 18) TYR20 0 0 0 0 0 0 1 0 0 0 0 ( 26) ARG28 0 0 0 0 0 0 1 0 0 0 0 ( 78) SER80 0 0 0 0 1 2 0 0 0 0 0 (168) ILE170 0 0 0 0 0 0 0 16 18 0 0 chainD ( 44) LYS458 0 0 0 0 2 6 1 0 0 0 0 prot.sequence niqnmsledimgerfgrYskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykyawtdgeleelrkqlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3rad_C:Type_II_DNA_topoisomerase; title=QUINOLONE(CLINAFLOXACIN)-DNA CLEAVAGE COMPLEX OF TYPE IV TOPOISOMERASE FROM S. PNEUMONIAE organism=? DNA sequence DA(F5):DT(E15) DT(F6):DA(E14) DT(F7):DA(E13) DC(F8):DG(E12) DA(F9):DT(E11) DT(F10):DA(E10) DG(F11):DC(E9) chainC ( 45) LYS458 1 1 0 0 0 0 0 prot.sequence gkltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykayawtdgeleelrklqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3rae_ABCD:Type_II_DNA_topoisomerase; title=QUINOLONE(LEVOFLOXACIN)-DNA CLEAVAGE COMPLEX OF TYPE IV TOPOISOMERASE FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(G9):DG(H11) DG(G10):DC(H10) DT(G11):DA(H9) DG(G12):DC(H8) DC(G13):DG(H7) DA(G14):DT(H6) DT(G15):DA(H5) DA(F1):DT(H4) DG(F2):DC(H3) DT(F3):DA(H2) DC(F4):DG(H1) DA(F5):DT(E15) DT(F6):DA(E14) DT(F7):DA(E13) DC(F8):DG(E12) DA(F9):DT(E11) DT(F10):DA(E10) DG(F11):DC(E9) chainA ( 77) SER79 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 78) SER80 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (115) ARG117 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (168) ILE170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 19 0 0 chainB ( 26) ARG28 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) SER80 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (115) ARG117 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (168) ILE170 0 0 17 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 45) LYS458 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 chainD ( 44) LYS458 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqnmsledimgerfgrYskyiiqdralpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdSSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/gkltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykyawtdgeleelrklqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmyawtdgeleelrkqlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3rae_B:Type_II_DNA_topoisomerase; title=QUINOLONE(LEVOFLOXACIN)-DNA CLEAVAGE COMPLEX OF TYPE IV TOPOISOMERASE FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(G9):DG(H11) DG(G10):DC(H10) DT(G11):DA(H9) DG(G12):DC(H8) DC(G13):DG(H7) DA(G14):DT(H6) DT(G15):DA(H5) DA(F1):DT(H4) DG(F2):DC(H3) DT(F3):DA(H2) DC(F4):DG(H1) DA(F5):DT(E15) DT(F6):DA(E14) DT(F7):DA(E13) DC(F8):DG(E12) DA(F9):DT(E11) DT(F10):DA(E10) DG(F11):DC(E9) chainB ( 26) ARG28 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) SER80 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (115) ARG117 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (168) ILE170 0 0 17 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled >3raf_AC:Type_II_DNA_topoisomerase; title=QUINAZOLINEDIONE-DNA CLEAVAGE COMPLEX OF TYPE IV TOPOISOMERASE FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(E9):DG(F11) DA(E10):DT(F10) DT(E11):DA(F9) DG(E12):DC(F8) DA(E13):DT(F7) DA(E14):DT(F6) DT(E15):DA(F5) chainA ( 26) ARG28 0 0 0 0 1 0 0 ( 77) SER79 0 0 0 0 0 0 1 ( 78) SER80 0 0 0 0 0 3 1 (168) ILE170 0 0 20 17 0 0 0 chainC ( 44) LYS458 0 0 0 0 3 7 2 prot.sequence niqnmsledimgerfgrYskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdSSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykayawtdgeleelrklqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3raf_BD:Type_II_DNA_topoisomerase; title=QUINAZOLINEDIONE-DNA CLEAVAGE COMPLEX OF TYPE IV TOPOISOMERASE FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(G9):DG(H11) DG(G10):DC(H10) DT(G11):DA(H9) DG(G12):DC(H8) DC(G13):DG(H7) DA(G14):DT(H6) DT(G15):DA(H5) DA(F1):DT(H4) DG(F2):DC(H3) DT(F3):DA(H2) DC(F4):DG(H1) chainB ( 26) ARG28 0 0 0 0 1 0 0 0 0 0 0 ( 77) SER79 0 0 0 0 0 0 1 0 0 0 0 ( 78) SER80 0 0 0 0 0 3 1 0 0 0 0 (115) ARG117 0 0 0 0 0 0 0 0 0 0 2 (168) ILE170 0 0 17 15 0 0 0 0 0 0 0 chainD ( 44) LYS458 0 0 0 0 4 7 1 0 0 0 0 prot.sequence niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdSSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmayawtdgeleelrkqlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3raf_D:Type_II_DNA_topoisomerase; title=QUINAZOLINEDIONE-DNA CLEAVAGE COMPLEX OF TYPE IV TOPOISOMERASE FROM S. PNEUMONIAE organism=? DNA sequence DG(H1):DC(F4) DA(H2):DT(F3) DC(H3):DG(F2) DT(H4):DA(F1) DA(H5):DT(G15) DT(H6):DA(G14) DG(H7):DC(G13) DC(H8):DG(G12) DA(H9):DT(G11) DC(H10):DG(G10) DG(H11):DC(G9) chainD ( 44) LYS458 0 0 0 0 1 7 4 0 0 0 0 prot.sequence kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmayawtdgeleelrkqlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >3raq_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER C BASE OPPOSITE THE 1-METHYLGUANINE (MG1) LESION organism=Sulfolobus solfataricus DNA sequence DG(H1802):DC(J1918) DT(H1803):DA(J1917) DT(H1804):DA(J1916) DG(H1805):DC(J1915) DG(H1806):DC(J1914) DA(H1807):DT(J1913) DT(H1808):DA(J1912) DG(H1809):DC(J1911) DG(H1810):DC(J1910) DT(H1811):DA(J1909) DA(H1812):DT(J1908) DG(H1813):DC(J1907) chainB (285) HIS1285 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvrfskfi >3rax_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER T BASE OPPOSITE THE 1-METHYLGUANINE (M1G) LESION organism=Sulfolobus solfataricus DNA sequence DC(J1907):DG(H1813) DT(J1908):DA(H1812) DA(J1909):DT(H1811) DC(J1910):DG(H1810) DC(J1911):DG(H1809) DA(J1912):DT(H1808) DT(J1913):DA(H1807) DC(J1914):DG(H1806) DC(J1915):DG(H1805) DA(J1916):DT(H1804) DA(J1917):DT(H1803) DC(J1918):DG(H1802) chainB (285) HIS1285 0 0 0 0 0 3 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvrfskfi >3rb0_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER G BASE OPPOSITE THE 1-METHYLGUANINE (M1G) LESION organism=Sulfolobus solfataricus DNA sequence DG(D802):DC(E918) DT(D803):DA(E917) DT(D804):DA(E916) DG(D805):DC(E915) DG(D806):DC(E914) DA(D807):DT(E913) DT(D808):DA(E912) DG(D809):DC(E911) DG(D810):DC(E910) DT(D811):DA(E909) DA(D812):DT(E908) DG(D813):DC(E907) chainA (285) HIS285 0 0 0 0 0 0 3 0 0 0 0 0 (297) SER297 0 0 0 0 0 0 1 1 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivSrgrtfphgisketaysesvkllqkileederkirrigvrfskfi >3rb3_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER A BASE OPPOSITE THE 1-METHYLGUANINE (M1G) LESION organism=Sulfolobus solfataricus DNA sequence DC(E907):DG(D813) DT(E908):DA(D812) DA(E909):DT(D811) DC(E910):DG(D810) DC(E911):DG(D809) DA(E912):DT(D808) DT(E913):DA(D807) DC(E914):DG(D806) DC(E915):DG(D805) DA(E916):DT(D804) DA(E917):DT(D803) DC(E918):DG(D802) chainA (285) HIS285 0 0 0 0 0 3 0 0 0 0 0 0 (336) ARG336 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3rb4_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER G BASE OPPOSITE THE 3-METHYLCYTOSINE (M3C) LESION organism=Sulfolobus solfataricus DNA sequence DC(J1907):DG(H1813) DT(J1908):DA(H1812) DA(J1909):DT(H1811) DC(J1910):DG(H1810) DC(J1911):DG(H1809) DA(J1912):DT(H1808) DT(J1913):DA(H1807) DC(J1914):DG(H1806) DC(J1915):DG(H1805) chainB (285) HIS1285 0 0 0 0 0 2 0 0 0 (336) ARG1336 0 8 0 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3rb6_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER A BASE OPPOSITE THE 3-METHYLCYTOSINE (M3C) LESION organism=Sulfolobus solfataricus DNA sequence DC(J1907):DG(H1813) DT(J1908):DA(H1812) DA(J1909):DT(H1811) DC(J1910):DG(H1810) DC(J1911):DG(H1809) DA(J1912):DT(H1808) DT(J1913):DA(H1807) DC(J1914):DG(H1806) DC(J1915):DG(H1805) chainB (285) HIS1285 0 0 0 0 0 1 0 0 0 (336) ARG1336 0 8 0 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3rbd_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER C BASE OPPOSITE THE 3-METHYLCYTOSINE (M3C) LESION organism=Sulfolobus solfataricus DNA sequence DC(J1907):DG(H1813) DT(J1908):DA(H1812) DA(J1909):DT(H1811) DC(J1910):DG(H1810) DC(J1911):DG(H1809) DA(J1912):DT(H1808) DT(J1913):DA(H1807) DC(J1914):DG(H1806) DC(J1915):DG(H1805) chainB (285) HIS1285 0 0 0 0 0 2 0 0 0 (336) ARG1336 0 9 0 0 0 0 0 0 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3rbe_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER T BASE OPPOSITE THE 3-METHYLCYTOSINE (M3C) LESION organism=Sulfolobus solfataricus DNA sequence DG(H1806):DC(J1914) DA(H1807):DT(J1913) DT(H1808):DA(J1912) DG(H1809):DC(J1911) DG(H1810):DC(J1910) DT(H1811):DA(J1909) DA(H1812):DT(J1908) DG(H1813):DC(J1907) chainB (336) ARG1336 0 0 0 0 0 0 6 0 prot.sequence givlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3reh_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=2.5 ANGSTROM CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE ASSEMBLED WITH A 145 BP ALPHA-SATELLITE DNA (NCP145) organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgiSskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaerVgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3rei_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=2.65 ANGSTROM CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE ASSEMBLED WITH A 145 BP ALPHA-SATELLITE DNA (NCP145) DERIVATIZED WITH TRIAMMINECHLOROPLATINUM(II) CHLORIDE organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgiSskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3rei_B:Histone-fold; title=2.65 ANGSTROM CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE ASSEMBLED WITH A 145 BP ALPHA-SATELLITE DNA (NCP145) DERIVATIZED WITH TRIAMMINECHLOROPLATINUM(II) CHLORIDE organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >3rej_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=2.55 ANGSTROM CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE ASSEMBLED WITH A 146 BP ALPHA-SATELLITE DNA (NCP146B) organism=XENOPUS LAEVIS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DT(J-70):DA(I70) DC(J-69):DG(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DA(J-65):DT(I65) DT(J-64):DA(I64) DA(J-63):DT(I63) DT(J-62):DA(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DC(J-59):DG(I59) DT(J-58):DA(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DC(J-55):DG(I55) DG(J-54):DC(I54) DG(J-53):DC(I53) DA(J-52):DT(I52) DT(J-51):DA(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DT(J-48):DA(I48) DA(J-47):DT(I47) DG(J-46):DC(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DA(J-42):DT(I42) DA(J-41):DT(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DG(J-38):DC(I38) DT(J-37):DA(I37) DG(J-36):DC(I36) DT(J-35):DA(I35) DC(J-34):DG(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DG(J-26):DC(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DG(J-17):DC(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DA(J-6):DT(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DG(J10):DC(I-10) DT(J11):DA(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DA(J23):DT(I-23) DG(J24):DC(I-24) DC(J25):DG(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DG(J33):DC(I-33) DA(J34):DT(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DA(J38):DT(I-38) DC(J39):DG(I-39) DT(J40):DA(I-40) DT(J41):DA(I-41) DT(J42):DA(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DC(J45):DG(I-45) DT(J46):DA(I-46) DA(J47):DT(I-47) DC(J48):DG(I-48) DG(J49):DC(I-49) DA(J50):DT(I-50) DT(J51):DA(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DG(J54):DC(I-54) DC(J55):DG(I-55) DA(J56):DT(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DG(J59):DC(I-59) DG(J60):DC(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DT(J65):DA(I-65) DT(J66):DA(I-66) DG(J67):DC(I-67) DG(J68):DC(I-68) DA(J69):DT(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllRkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/kkRrktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3rej_G:Histone-fold; title=2.55 ANGSTROM CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE ASSEMBLED WITH A 146 BP ALPHA-SATELLITE DNA (NCP146B) organism=? DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DT(J-70):DA(I70) DC(J-69):DG(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DA(J-65):DT(I65) DT(J-64):DA(I64) DA(J-63):DT(I63) DT(J-62):DA(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DC(J-59):DG(I59) DT(J-58):DA(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DC(J-55):DG(I55) DG(J-54):DC(I54) DG(J-53):DC(I53) DA(J-52):DT(I52) DT(J-51):DA(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DT(J-48):DA(I48) DA(J-47):DT(I47) DG(J-46):DC(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DA(J-42):DT(I42) DA(J-41):DT(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DG(J-38):DC(I38) DT(J-37):DA(I37) DG(J-36):DC(I36) DT(J-35):DA(I35) DC(J-34):DG(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DG(J-26):DC(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DG(J-17):DC(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DA(J-6):DT(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DG(J10):DC(I-10) DT(J11):DA(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DA(J23):DT(I-23) DG(J24):DC(I-24) DC(J25):DG(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DG(J33):DC(I-33) DA(J34):DT(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DA(J38):DT(I-38) DC(J39):DG(I-39) DT(J40):DA(I-40) DT(J41):DA(I-41) DT(J42):DA(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DC(J45):DG(I-45) DT(J46):DA(I-46) DA(J47):DT(I-47) DC(J48):DG(I-48) DG(J49):DC(I-49) DA(J50):DT(I-50) DT(J51):DA(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DG(J54):DC(I-54) DC(J55):DG(I-55) DA(J56):DT(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DG(J59):DC(I-59) DG(J60):DC(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DT(J65):DA(I-65) DT(J66):DA(I-66) DG(J67):DC(I-67) DG(J68):DC(I-68) DA(J69):DT(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >3rek_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=2.6 ANGSTROM CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE ASSEMBLED WITH A 146 BP ALPHA-SATELLITE DNA (NCP146B) DERIVATIZED WITH OXALIPLATIN organism=XENOPUS LAEVIS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DT(J-70):DA(I70) DC(J-69):DG(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DA(J-65):DT(I65) DT(J-64):DA(I64) DA(J-63):DT(I63) DT(J-62):DA(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DC(J-59):DG(I59) DT(J-58):DA(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DC(J-55):DG(I55) DG(J-54):DC(I54) DG(J-53):DC(I53) DA(J-52):DT(I52) DT(J-51):DA(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DT(J-48):DA(I48) DA(J-47):DT(I47) DG(J-46):DC(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DA(J-42):DT(I42) DA(J-41):DT(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DG(J-38):DC(I38) DT(J-37):DA(I37) DG(J-36):DC(I36) DT(J-35):DA(I35) DC(J-34):DG(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DG(J-26):DC(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DG(J-17):DC(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DA(J-6):DT(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DG(J10):DC(I-10) DT(J11):DA(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DA(J23):DT(I-23) DG(J24):DC(I-24) DC(J25):DG(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DG(J33):DC(I-33) DA(J34):DT(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DA(J38):DT(I-38) DC(J39):DG(I-39) DT(J40):DA(I-40) DT(J41):DA(I-41) DT(J42):DA(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DC(J45):DG(I-45) DT(J46):DA(I-46) DA(J47):DT(I-47) DC(J48):DG(I-48) DG(J49):DC(I-49) DA(J50):DT(I-50) DT(J51):DA(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DG(J54):DC(I-54) DC(J55):DG(I-55) DA(J56):DT(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DG(J59):DC(I-59) DG(J60):DC(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DT(J65):DA(I-65) DT(J66):DA(I-66) DG(J67):DC(I-67) DG(J68):DC(I-68) DA(J69):DT(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllRkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/kkRrktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3rek_C:Histone-fold; title=2.6 ANGSTROM CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE ASSEMBLED WITH A 146 BP ALPHA-SATELLITE DNA (NCP146B) DERIVATIZED WITH OXALIPLATIN organism=XENOPUS LAEVIS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DT(J-70):DA(I70) DC(J-69):DG(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DA(J-65):DT(I65) DT(J-64):DA(I64) DA(J-63):DT(I63) DT(J-62):DA(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DC(J-59):DG(I59) DT(J-58):DA(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DC(J-55):DG(I55) DG(J-54):DC(I54) DG(J-53):DC(I53) DA(J-52):DT(I52) DT(J-51):DA(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DT(J-48):DA(I48) DA(J-47):DT(I47) DG(J-46):DC(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DA(J-42):DT(I42) DA(J-41):DT(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DG(J-38):DC(I38) DT(J-37):DA(I37) DG(J-36):DC(I36) DT(J-35):DA(I35) DC(J-34):DG(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DG(J-26):DC(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DG(J-17):DC(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DA(J-6):DT(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DG(J10):DC(I-10) DT(J11):DA(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DA(J23):DT(I-23) DG(J24):DC(I-24) DC(J25):DG(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DG(J33):DC(I-33) DA(J34):DT(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DA(J38):DT(I-38) DC(J39):DG(I-39) DT(J40):DA(I-40) DT(J41):DA(I-41) DT(J42):DA(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DC(J45):DG(I-45) DT(J46):DA(I-46) DA(J47):DT(I-47) DC(J48):DG(I-48) DG(J49):DC(I-49) DA(J50):DT(I-50) DT(J51):DA(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DG(J54):DC(I-54) DC(J55):DG(I-55) DA(J56):DT(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DG(J59):DC(I-59) DG(J60):DC(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DT(J65):DA(I-65) DT(J66):DA(I-66) DG(J67):DC(I-67) DG(J68):DC(I-68) DA(J69):DT(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainC ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence trssraglqfpvgrvhrllRkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >3rel_A:Histone-fold; title=2.7 ANGSTROM CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE ASSEMBLED WITH A 146 BP ALPHA-SATELLITE DNA (NCP146B) DERIVATIZED WITH TRIAMMINECHLOROPLATINUM(II) CHLORIDE organism=? DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DT(J-70):DA(I70) DC(J-69):DG(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DA(J-65):DT(I65) DT(J-64):DA(I64) DA(J-63):DT(I63) DT(J-62):DA(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DC(J-59):DG(I59) DT(J-58):DA(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DC(J-55):DG(I55) DG(J-54):DC(I54) DG(J-53):DC(I53) DA(J-52):DT(I52) DT(J-51):DA(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DT(J-48):DA(I48) DA(J-47):DT(I47) DG(J-46):DC(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DA(J-42):DT(I42) DA(J-41):DT(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DG(J-38):DC(I38) DT(J-37):DA(I37) DG(J-36):DC(I36) DT(J-35):DA(I35) DC(J-34):DG(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DG(J-26):DC(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DG(J-17):DC(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DA(J-6):DT(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DG(J10):DC(I-10) DT(J11):DA(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DA(J23):DT(I-23) DG(J24):DC(I-24) DC(J25):DG(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DG(J33):DC(I-33) DA(J34):DT(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DA(J38):DT(I-38) DC(J39):DG(I-39) DT(J40):DA(I-40) DT(J41):DA(I-41) DT(J42):DA(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DC(J45):DG(I-45) DT(J46):DA(I-46) DA(J47):DT(I-47) DC(J48):DG(I-48) DG(J49):DC(I-49) DA(J50):DT(I-50) DT(J51):DA(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DG(J54):DC(I-54) DC(J55):DG(I-55) DA(J56):DT(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DG(J59):DC(I-59) DG(J60):DC(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DT(J65):DA(I-65) DT(J66):DA(I-66) DG(J67):DC(I-67) DG(J68):DC(I-68) DA(J69):DT(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >3rel_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=2.7 ANGSTROM CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE ASSEMBLED WITH A 146 BP ALPHA-SATELLITE DNA (NCP146B) DERIVATIZED WITH TRIAMMINECHLOROPLATINUM(II) CHLORIDE organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DT(I-69):DA(J69) DC(I-68):DG(J68) DC(I-67):DG(J67) DA(I-66):DT(J66) DA(I-65):DT(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DC(I-60):DG(J60) DC(I-59):DG(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DT(I-56):DA(J56) DG(I-55):DC(J55) DC(I-54):DG(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DA(I-51):DT(J51) DT(I-50):DA(J50) DC(I-49):DG(J49) DG(I-48):DC(J48) DT(I-47):DA(J47) DA(I-46):DT(J46) DG(I-45):DC(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DA(I-42):DT(J42) DA(I-41):DT(J41) DA(I-40):DT(J40) DG(I-39):DC(J39) DT(I-38):DA(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DT(I-34):DA(J34) DC(I-33):DG(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DG(I-25):DC(J25) DC(I-24):DG(J24) DT(I-23):DA(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DA(I-11):DT(J11) DC(I-10):DG(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DT(I2):DA(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DT(I6):DA(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DC(I17):DG(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DC(I26):DG(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DG(I34):DC(J-34) DA(I35):DT(J-35) DC(I36):DG(J-36) DA(I37):DT(J-37) DC(I38):DG(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DT(I41):DA(J-41) DT(I42):DA(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DC(I46):DG(J-46) DT(I47):DA(J-47) DA(I48):DT(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DA(I51):DT(J-51) DT(I52):DA(J-52) DC(I53):DG(J-53) DC(I54):DG(J-54) DG(I55):DC(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DA(I58):DT(J-58) DG(I59):DC(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DA(I62):DT(J-62) DT(I63):DA(J-63) DA(I64):DT(J-64) DT(I65):DA(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DG(I68):DC(J-68) DG(I69):DC(J-69) DA(I70):DT(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllRkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/kkRrktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3rh4_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA WITH A DIDEOXY-TERMINATED PRIMER WITH AN INCOMING RIBONUCLEOTIDE (RCTP) organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 36 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3rh5_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MUTANT (Y271) WITH A DIDEOXY-TERMINATED PRIMER WITH AN INCOMING DEOXYNUCLEOTIDE (DCTP) organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 33 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlaftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3rh6_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MUTANT (Y271) WITH A DIDEOXY-TERMINATED PRIMER WITH AN INCOMING RIBONUCLEOTIDE (RCTP) organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 31 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 3 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlaftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3ri4_D:"Winged_helix"_DNA-binding_domain; title=ETS1 COOPERATIVE BINDING TO WIDELY SEPARATED SITES ON PROMOTER DNA organism=Homo sapiens DNA sequence DA(F302):DT(E216) DG(F303):DC(E215) DA(F304):DT(E214) DG(F305):DC(E213) DG(F306):DC(E212) DA(F307):DT(E211) DT(F308):DA(E210) DG(F309):DC(E209) DT(F310):DA(E208) DG(F311):DC(E207) DG(F312):DC(E206) DC(F313):DG(E205) DT(F314):DA(E204) DT(F315):DA(E203) DC(F316):DG(E202) chainD ( 87) LYS388 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 90) ARG391 0 0 0 19 16 7 0 0 0 0 0 0 0 0 0 ( 93) ARG394 0 0 7 13 0 0 0 0 0 0 0 0 0 0 0 ( 94) TYR395 0 0 0 0 0 1 4 7 0 0 0 0 0 0 0 prot.sequence gtfkdyvrdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkp >3rje_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A GAPPED DNA CONTAINING 8ODG AT TEMPLATE POSITION organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 37 0 0 0 0 ( 29) LYS35 8 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3rjf_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A GAPPED DNA CONTAINING (SYN)8ODG AT TEMPLATE POSITION PAIRED WITH NON-HYDROLYZABLE DATP ANALOG (DAPCPP) organism=Homo sapiens DNA sequence DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 2 6 0 0 0 0 0 0 0 (262) TYR271 8 0 0 0 0 0 0 0 0 0 (274) ARG283 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3rjg_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX OF DNA POLYMERASE BETA WITH A GAPPED DNA CONTAINING 8ODG:DA BASE-PAIR AT PRIMER TERMINUS organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 39 0 0 0 0 ( 26) LYS35 9 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3rjh_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A GAPPED DNA CONTAINING (SYN)8ODG:DA AT PRIMER TERMINUS AND DG:DCMP(CF2)PPIN THE ACTIVE SITE organism=Homo sapiens DNA sequence DG(T6):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 2 6 0 0 0 0 0 0 0 (262) TYR271 10 0 0 0 0 0 0 0 0 0 (270) ASN279 3 0 0 0 0 0 0 0 0 0 (271) LYS280 21 0 0 0 0 0 0 0 0 0 (274) ARG283 12 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsdifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3rji_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A GAPPED DNA CONTAINING 8ODG AT TEMPLATE POSITION PAIRED WITH NON-HYDROLYZABLE DCTP ANALOG (DCMP(CF2)PP) organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DA(P10):DT(T7) chainA (225) LYS234 0 0 0 0 0 0 0 6 2 0 (227) MET236 0 0 0 0 0 0 0 1 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 8 (274) ARG283 0 0 0 0 0 0 0 0 0 3 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfMgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3rjj_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH TEMPLATE 8ODG PROVIDES INSIGHT INTO MUTAGENIC LESION BYPASS organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 40 0 0 0 0 ( 26) LYS35 8 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3rjk_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A GAPPED DNA CONTAINING 8ODG:DC BASE PAIR AT PRIMER TERMINUS AND DG:DCMP(CF2)PP IN THE ACTIVE SITE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 33 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3rkq_AB:Homeodomain-like; title=NKX2.5 HOMEODOMAIN DIMER BOUND TO ANF-242 DNA organism=Homo sapiens DNA sequence DT(C1):DA(D19) DG(C2):DC(D18) DA(C3):DT(D17) DA(C4):DT(D16) DG(C5):DC(D15) DT(C6):DA(D14) DG(C7):DC(D13) DG(C8):DC(D12) DG(C9):DC(D11) DG(C10):DC(D10) DG(C11):DC(D9) DC(C12):DG(D8) DC(C13):DG(D7) DT(C14):DA(D6) DC(C15):DG(D5) DT(C16):DA(D4) DT(C17):DA(D3) DG(C18):DC(D2) DA(C19):DT(D1) chainA ( 6) ARG142 5 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ILE184 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN187 0 0 0 0 0 2 10 2 0 0 0 0 0 0 0 0 0 0 0 ( 52) ASN188 0 0 4 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) TYR191 0 0 0 2 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 6) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 4 ( 48) ILE184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 51) GLN187 0 0 0 0 0 0 0 0 0 0 0 2 12 7 0 0 0 0 0 ( 52) ASN188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 3 0 0 ( 55) TYR191 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 1 0 0 0 prot.sequence grrkpRvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYKsk/grrkpRvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYks >3rkq_B:Homeodomain-like; title=NKX2.5 HOMEODOMAIN DIMER BOUND TO ANF-242 DNA organism=Homo sapiens DNA sequence DT(D1):DA(C19) DC(D2):DG(C18) DA(D3):DT(C17) DA(D4):DT(C16) DG(D5):DC(C15) DA(D6):DT(C14) DG(D7):DC(C13) DG(D8):DC(C12) DC(D9):DG(C11) DC(D10):DG(C10) DC(D11):DG(C9) DC(D12):DG(C8) DC(D13):DG(C7) DA(D14):DT(C6) DC(D15):DG(C5) DT(D16):DA(C4) DT(D17):DA(C3) DC(D18):DG(C2) DA(D19):DT(C1) chainB ( 6) ARG142 4 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ILE184 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN187 0 0 0 0 0 7 12 2 0 0 0 0 0 0 0 0 0 0 0 ( 52) ASN188 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) TYR191 0 0 0 1 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence grrkpRvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYks >3rma_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF A REPLICATIVE DNA POLYMERASE BOUND TO DNA CONTAINING THYMINE GLYCOL organism=Enterobacteria phage RB69 DNA sequence DA(K7):DT(L111) DT(K8):DA(L110) DG(K9):DC(L109) DA(K10):DT(L108) DC(K11):DG(L107) DA(K12):DT(L106) DG(K13):DC(L105) DC(K14):DG(L104) DC(K15):DG(L103) DG(K16):DC(L102) DC(K17):DG(L101) chainD (792) LYS800 0 0 0 0 0 3 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkveiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkkryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslf >3rmd_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF A REPLICATIVE DNA POLYMERASE BOUND TO DNA CONTAINING THYMINE GLYCOL organism=Enterobacteria phage RB69 DNA sequence DG(J101):DC(I17) DC(J102):DG(I16) DG(J103):DC(I15) DG(J104):DC(I14) DC(J105):DG(I13) DT(J106):DA(I12) DG(J107):DC(I11) DT(J108):DA(I10) DC(J109):DG(I9) DA(J110):DT(I8) DT(J111):DA(I7) DT(J112):DA(I6) DC(J113):DG(I5) DA(J114):DT(I3) DA(J115):DG(I2) chainC (279) LYS279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (361) PRO361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (565) SER565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (567) TYR567 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (706) LYS706 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 (800) LYS800 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinSlYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3rmp_A: title=STRUCTURAL BASIS FOR THE RECOGNITION OF ATTP SUBSTRATES BY P4-LIKE INTEGRASES organism=Yersinia pestis DNA sequence DA(G2):DT(H14) DA(G3):DT(H13) DT(G4):DA(H12) DG(G5):DC(H11) DA(G6):DT(H10) DC(G7):DG(H9) DC(G8):DG(H8) DA(G9):DT(H7) DC(G10):DG(H6) DC(G11):DG(H5) DA(G12):DT(H4) DA(G13):DT(H3) DT(G14):DA(H2) chainA ( 18) LYS19 0 0 0 0 0 9 9 1 0 0 0 0 0 ( 30) LYS31 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 38) TYR39 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 40) LYS41 0 0 0 0 0 0 0 2 8 6 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 9 12 0 0 ( 47) GLU48 0 0 0 0 0 12 9 0 0 0 0 0 0 ( 48) SER49 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 49) ARG50 0 0 2 14 14 2 0 0 0 0 0 0 0 prot.sequence sltdakirtlkpsdkpfKvsdshglyllvKpggsrhwYlKyRisgkESRialgaypaislsdarqqregirkmlaln >3rn2_AB:HIN-2000_domain-like; title=STRUCTURAL BASIS OF CYTOSOLIC DNA RECOGNITION BY INNATE IMMUNE RECEPTORS organism=Homo sapiens DNA sequence DC(K1):DG(L20) DC(K2):DG(L19) DA(K3):DT(L18) DT(K4):DA(L17) DC(K5):DG(L16) DA(K6):DT(L15) DA(K7):DT(L14) DA(K8):DT(L13) DG(K9):DC(L12) DA(K10):DT(L11) DT(K11):DA(L10) DC(K12):DG(L9) DT(K13):DA(L8) DT(K14):DA(L7) DT(K15):DA(L6) DG(K16):DC(L5) DA(K17):DT(L4) DT(K18):DA(L3) DG(K19):DC(L2) DG(K20):DC(L1) chainA chainB ( 17) LYS163 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence egfqkrclpvmvlkakkpftfetqegkqemfhatvatekefffvkvfntllkdkfipkriiiiaryyrhsgflevnsasrvldaesdqkvnvplniirkagetpkintlqtqplgtivnglfvvqkvtekkknilfdlsdntgkmevlgvrnedtmkckegdkvrltfftlskngeklqltsgvhstikvikak/egfqkrclpvmvlkakKpftfetqegkqemfhatvatekefffvkvfntllkdkfipkriiiiaryyrhsgflevnsasrvldaesdqkvnvplniirkagetpkintlqtqplgtivnglfvvqkvtekkknilfdlsdntgkmevlgvrnedtmkckegdkvrltfftlskngeklqltsgvhstikvika >3rn2_B:HIN-2000_domain-like; title=STRUCTURAL BASIS OF CYTOSOLIC DNA RECOGNITION BY INNATE IMMUNE RECEPTORS organism=Homo sapiens DNA sequence DC(L1):DG(K20) DC(L2):DG(K19) DA(L3):DT(K18) DT(L4):DA(K17) DC(L5):DG(K16) DA(L6):DT(K15) DA(L7):DT(K14) DA(L8):DT(K13) DG(L9):DC(K12) DA(L10):DT(K11) DT(L11):DA(K10) DC(L12):DG(K9) DT(L13):DA(K8) DT(L14):DA(K7) DT(L15):DA(K6) DG(L16):DC(K5) DA(L17):DT(K4) DT(L18):DA(K3) DG(L19):DC(K2) DG(L20):DC(K1) chainB ( 17) LYS163 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence egfqkrclpvmvlkakKpftfetqegkqemfhatvatekefffvkvfntllkdkfipkriiiiaryyrhsgflevnsasrvldaesdqkvnvplniirkagetpkintlqtqplgtivnglfvvqkvtekkknilfdlsdntgkmevlgvrnedtmkckegdkvrltfftlskngeklqltsgvhstikvika >3rn5_C:HIN-2000_domain-like; title=STRUCTURAL BASIS OF CYTOSOLIC DNA RECOGNITION BY INNATE IMMUNE RECEPTORS organism=Homo sapiens DNA sequence DC(N2):DG(M19) DT(N3):DA(M18) DC(N4):DG(M17) DT(N5):DA(M16) DT(N6):DA(M15) DT(N7):DA(M14) DC(N8):DG(M13) DT(N9):DA(M12) DC(N10):DG(M11) DT(N11):DA(M10) DC(N12):DG(M9) DT(N13):DA(M8) DT(N14):DA(M7) DT(N15):DA(M6) DG(N16):DC(M5) DA(N17):DT(M4) DT(N18):DA(M3) DG(N19):DC(M2) chainC ( 17) LYS163 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 prot.sequence egfqkrclpvmvlkakKpftfetqegkqemfhatvatekefffvkvfntllkdkfipkriiiiaryyrhsgflevnsasrvldaesdqkvnvplniirkagetpkintlqtqplgtivnglfvvqkvtekkknilfdlsdntgkmevlgvrnedtmkckegdkvrltfftlskngeklqltsgvhstikvikak >3rnu_ABCD:HIN-2000_domain-like; title=STRUCTURAL BASIS OF CYTOSOLIC DNA SENSING BY INNATE IMMUNE RECEPTORS organism=Homo sapiens DNA sequence DG(K1):DC(L15) DC(K2):DG(L14) DC(K3):DG(L13) DA(K4):DT(L12) DT(K5):DA(L11) DC(K6):DG(L10) DA(K7):DT(L9) DA(K8):DT(L8) DA(K9):DT(L7) DG(K10):DC(L6) DA(K11):DT(L5) DG(K12):DC(L4) DA(K13):DT(L3) DG(K14):DC(L2) DA(K15):DT(L1) chainA ( 95) ARG667 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 chainB ( 98) ARG667 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 chainC chainD prot.sequence saqsdlkevmvlnatesfvyepkeqkkmfhatvatenevfrvkvfnidlkekftpkkiiaanyvcrngflevypftlvadvnadrnmeipkgliRsasvtpkinqlcsqtkgsfvngvfevhkknvrgeftyyeiqdntgkmevvvhgrlttinceegdklkltcfelapksgntgelrsvihshikviktrknaaas/ddsaqsdlkevmvlnatesfvyepkeqkkmfhatvatenevfrvkvfnidlkekftpkkiiaianyvcrngflevypftlvadvnadrnmeipkgliRsasvtpkinqlcsqtkgsfvngvfevhkknvrgeftyyeiqdntgkmevvvhgrlttinceegdklkltcfelapksgntgelrsvihshikviktrknaaas/saqsdlkevmvlnatesfvyepkeqkkmfhatvatenevfrvkvfnidlkekftpkkiiaianyvcrngflevypftlvadvnadrnmeipkglirsAsvtpkinqlcsqtkgsfvngvfevhkknvrgeftyyeiqdntgkmevvvhgrlttinceegdklkltcfelapksgntgelrsvihshikviktrknaaas/saqsdlkevmvlnatesfvyepkeqkkmfhatvatenevfrvkvfnidlkekftpkkiiaanyvcrngflevypftlvadvnadrnmeipkglirsaSvtpkinqlcsqtkgsfvngvfevhkknvrgeftyyeiqdntgkmevvvhgrlttinceegdklkltcfelapksgntgelrsvihshikviktrknaaas >3rnu_B:HIN-2000_domain-like; title=STRUCTURAL BASIS OF CYTOSOLIC DNA SENSING BY INNATE IMMUNE RECEPTORS organism=Homo sapiens DNA sequence DG(K1):DC(L15) DC(K2):DG(L14) DC(K3):DG(L13) DA(K4):DT(L12) DT(K5):DA(L11) DC(K6):DG(L10) DA(K7):DT(L9) DA(K8):DT(L8) DA(K9):DT(L7) DG(K10):DC(L6) DA(K11):DT(L5) DG(K12):DC(L4) DA(K13):DT(L3) DG(K14):DC(L2) DA(K15):DT(L1) chainB ( 98) ARG667 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 prot.sequence ddsaqsdlkevmvlnatesfvyepkeqkkmfhatvatenevfrvkvfnidlkekftpkkiiaianyvcrngflevypftlvadvnadrnmeipkgliRsasvtpkinqlcsqtkgsfvngvfevhkknvrgeftyyeiqdntgkmevvvhgrlttinceegdklkltcfelapksgntgelrsvihshikviktrknaaas >3rr7_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY STRUCTURE OF THE LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO AN ABASIC SITE organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) DOC(B112):DG(C205) chainA (246) LYS540 0 0 0 0 0 0 0 4 5 0 0 0 (279) ARG573 0 0 0 0 0 0 0 0 0 0 3 8 (286) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 (289) ASN583 0 0 0 0 0 0 0 0 2 10 1 0 (359) TYR671 0 0 0 0 0 0 0 0 0 0 0 3 (442) GLN754 0 0 0 0 0 0 0 0 0 0 0 4 (472) HIS784 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence eeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihteraaktinfgvlYgmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3rr8_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY STRUCTURE OF THE LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO AN ABASIC SITE AND A DDGTP organism=Thermus aquaticus DNA sequence DC(C205):DDG(B112) DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (248) LYS540 0 0 0 5 4 0 0 0 0 0 0 0 (281) ARG573 14 3 0 0 0 0 0 0 0 0 0 0 (288) ASN580 0 0 1 0 0 0 0 0 0 0 0 0 (291) ASN583 0 1 9 1 0 0 0 0 0 0 0 0 (295) ARG587 3 6 0 0 0 0 0 0 0 0 0 0 (373) TYR671 41 0 0 0 0 0 0 0 0 0 0 0 (452) ASN750 1 0 0 0 0 0 0 0 0 0 0 0 (456) GLN754 3 0 0 0 0 0 0 0 0 0 0 0 (486) HIS784 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvRtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvplmrraaktinfgvlYgmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3rrg_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY STRUCTURE OF THE LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO AN ABASIC SITE AND A DDGTP organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) DDG(B112):DC(C205) chainA (247) LYS540 0 0 0 0 0 0 0 4 6 0 0 0 (252) TYR545 0 0 0 0 0 0 0 0 0 1 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 0 3 13 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 (290) ASN583 0 0 0 0 0 0 0 0 1 10 1 0 (294) ARG587 0 0 0 0 0 0 0 0 0 0 6 4 (374) TYR671 0 0 0 0 0 0 0 0 0 0 0 43 (453) ASN750 0 0 0 0 0 0 0 0 0 0 0 1 (457) GLN754 0 0 0 0 0 0 0 0 0 0 0 4 (487) HIS784 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvRtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvprelmrraaktinfgvlYgmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3rrh_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY STRUCTURE OF THE LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO AN ABASIC SITE AND A DDTTP organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) 2DT(B112):DA(C205) chainA (246) LYS540 0 0 0 0 0 0 0 4 5 0 0 0 (279) ARG573 0 0 0 0 0 0 0 0 0 0 4 6 (286) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 (289) ASN583 0 0 0 0 0 0 0 0 2 10 1 0 (293) ARG587 0 0 0 0 0 0 0 0 0 0 0 3 (377) TYR671 0 0 0 0 0 0 0 0 0 0 0 52 (460) GLN754 0 0 0 0 0 0 0 0 0 0 1 2 (490) HIS784 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence eeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlYgmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3rtv_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH NATURAL PRIMER/TEMPLATE DNA organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (248) LYS540 0 0 0 0 0 0 0 4 5 1 0 (281) ARG573 0 0 0 0 0 0 0 0 0 0 4 (288) ASN580 0 0 0 0 0 0 0 0 0 1 0 (291) ASN583 0 0 0 0 0 0 0 0 1 11 1 (462) GLN754 0 0 0 0 0 0 0 0 0 0 1 (492) HIS784 0 0 0 0 0 0 0 0 0 0 2 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3rwu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DATP OPPOSITE DIFLUOROTOLUENE NUCLEOSIDE organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DOC(P115):DG(T5) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 6 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3rzd_AB: title=RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT RNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DC(T21) DT(T22):DC(T23) chainA (428) PRO448 0 0 0 3 0 0 0 (811) THR831 0 0 0 5 0 0 0 (812) ALA832 0 0 0 3 0 0 0 (1346) ARG1386 4 5 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiaKprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgEDviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3rzg_A:Clavaminate_synthase-like; title=DUPLEX INTERROGATION BY A DIRECT DNA REPAIR PROTEIN IN THE SEARCH OF DAMAGE organism=Homo sapiens DNA sequence DC(C273):DG(B271) DG(C274):DC(B270) DC(C275):DG(B269) DA(C276):DT(B268) DG(C277):DC(B267) DT(C278):DA(B266) DG(C279):DC(B265) DA(C280):DT(B264) DT(C281):DA(B263) DG(C282):DC(B262) DA(C283):DT(B261) DC(C284):DG(B260) DA(C285):DT(B259) chainA ( 47) VAL101 0 0 0 0 0 9 4 0 0 0 0 0 0 ( 48) PHE102 0 0 0 0 0 49 51 0 0 0 0 0 0 (115) CYS169 0 0 0 0 0 5 0 0 0 0 0 0 0 prot.sequence mswrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgkwhsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhiCehrdderdlapgspiasvsfgasrdfvfrhkdsrgkspsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3rzh_A:Clavaminate_synthase-like; title=DUPLEX INTERROGATION BY A DIRECT DNA REPAIR PROTEIN IN THE SEARCH OF DAMAGE organism=Homo sapiens DNA sequence DG(B261):DC(C283) DT(B262):DA(C282) DC(B263):DG(C281) DT(B264):DA(C280) ME6(B265):DG(C279) DA(B266):DT(C278) DC(B267):DG(C277) DT(B268):DA(C276) DG(B269):DC(C275) DC(B270):DG(C274) DG(B271):DC(C273) chainA ( 47) VAL101 0 0 0 0 0 11 0 0 0 0 0 ( 48) PHE102 0 0 0 84 1 46 0 0 0 0 0 ( 56) ARG110 0 0 0 0 1 0 0 0 0 0 0 ( 58) GLN112 0 0 0 0 1 0 0 0 0 0 0 ( 68) TYR122 0 0 0 0 6 0 0 0 0 0 0 ( 70) PHE124 0 0 0 0 34 0 0 0 0 0 0 ( 71) SER125 0 0 0 0 3 0 0 0 0 0 0 (103) LEU157 0 0 0 0 1 0 0 0 0 0 0 (114) ILE168 0 0 0 0 3 0 0 0 0 0 0 (115) CYS169 0 0 0 0 0 5 0 0 0 0 0 (117) HIS171 0 0 0 0 33 0 0 0 0 0 0 (119) ASP173 0 0 0 0 5 0 0 0 0 0 0 (121) GLU175 0 0 0 0 6 0 0 0 0 0 0 (197) ARG254 0 0 0 0 1 0 0 0 0 0 0 prot.sequence hswrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgkwHsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhiCehrdderelapgspiasvsfgasrdfvfrhkdsrpsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3rzj_A:Clavaminate_synthase-like; title=DUPLEX INTERROGATION BY A DIRECT DNA REPAIR PROTEIN IN THE SEARCH OF DAMAGE organism=Homo sapiens DNA sequence DG(B261):DC(C283) DT(B262):DA(C282) DC(B263):DG(C281) DT(B264):DA(C280) ME6(B265):DG(C279) DA(B266):DT(C278) DC(B267):DG(C277) DT(B268):DA(C276) DG(B269):DC(C275) DC(B270):DG(C274) DG(B271):DC(C273) chainA ( 49) VAL101 0 0 0 0 0 12 0 0 0 0 0 ( 50) PHE102 0 0 0 84 1 45 0 0 0 0 0 ( 58) ARG110 0 0 0 0 1 0 0 0 0 0 0 ( 70) TYR122 0 0 0 0 6 0 0 0 0 0 0 ( 72) PHE124 0 0 0 0 35 0 0 0 0 0 0 ( 73) SER125 0 0 0 0 3 0 0 0 0 0 0 (105) LEU157 0 0 0 0 1 0 0 0 0 0 0 (116) ILE168 0 0 0 0 3 0 0 0 0 0 0 (117) CYS169 0 0 0 0 0 5 0 0 0 0 0 (119) HIS171 0 0 0 0 36 0 0 0 0 0 0 (121) ASP173 0 0 0 0 5 0 0 0 0 0 0 (123) GLU175 0 0 0 0 9 0 0 0 0 0 0 (199) ARG254 0 0 0 0 1 0 0 0 0 0 0 prot.sequence gshswrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgkwhsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhiCehrdderelapgspiasvsfgasrdfvfrhkdsrpsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3rzk_A:Clavaminate_synthase-like; title=DUPLEX INTERROGATION BY A DIRECT DNA REPAIR PROTEIN IN THE SEARCH OF DAMAGE organism=Homo sapiens DNA sequence DT(B260):DA(C284) DG(B261):DC(C283) DT(B262):DA(C282) DC(B263):DG(C281) DT(B264):DA(C280) DA(B266):DT(C279) DC(B267):DT(C278) DT(B268):DG(C277) DG(B269):DA(C276) DC(B270):DC(C275) DG(B271):DG(C274) chainA ( 44) ARG98 0 0 0 0 1 0 0 0 0 0 0 ( 47) VAL101 0 0 0 0 0 8 0 0 0 0 0 ( 48) PHE102 0 0 0 0 32 22 33 0 0 0 0 ( 50) LYS104 0 0 0 0 8 0 0 0 0 0 0 ( 51) TRP105 0 0 0 0 5 0 0 0 0 0 0 (115) CYS169 0 0 0 0 0 5 0 0 0 0 0 prot.sequence hswrhiraegldssytvlfgkaeadeifqelekeveyftgalaRvqVFgKWhsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhiCehrdderelapgspiasvsfgasrdfvfrhkdsrpsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3rzl_D:Clavaminate_synthase-like; title=DUPLEX INTERROGATION BY A DIRECT DNA REPAIR PROTEIN IN THE SEARCH OF DAMAGE organism=Homo sapiens DNA sequence DC(F273):DG(E271) DG(F274):DC(E270) DC(F275):DG(E269) DA(F276):DT(E268) DG(F277):DC(E267) DT(F278):DA(E266) DI(F279):DC(E265) DA(F280):DT(E264) DT(F281):DA(E263) DA(F282):DT(E262) DC(F283):DG(E261) DA(F284):DT(E260) chainD ( 47) VAL101 0 0 0 0 0 20 0 0 0 0 0 0 ( 48) PHE102 0 0 0 0 0 86 4 36 0 0 0 0 ( 56) ARG110 0 0 0 0 0 0 1 0 0 0 0 0 ( 68) TYR122 0 0 0 0 0 0 4 0 0 0 0 0 ( 70) PHE124 0 0 0 0 0 0 27 0 0 0 0 0 ( 71) SER125 0 0 0 0 0 0 3 0 0 0 0 0 (114) ILE168 0 0 0 0 0 0 3 0 0 0 0 0 (115) CYS169 0 0 0 0 0 8 0 0 0 0 0 0 (117) HIS171 0 0 0 0 0 0 32 0 0 0 0 0 (119) ASP173 0 0 0 0 0 0 4 0 0 0 0 0 (121) GLU175 0 0 0 0 0 0 5 0 0 0 0 0 prot.sequence hswrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgkwhsvpRkqatygdagltYtFSgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhICeHrDdErelapgspiasvsfgasrdfvfrhkdsrgkvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3rzm_A:Clavaminate_synthase-like; title=DUPLEX INTERROGATION BY A DIRECT DNA REPAIR PROTEIN IN THE SEARCH OF DAMAGE organism=Homo sapiens DNA sequence DC(C275):DG(B273) DG(C276):DC(B272) DC(C277):DG(B271) DA(C278):DT(B270) DG(C279):DC(B269) DT(C280):DA(B268) DT(C281):DA(B267) DA(C282):DT(B266) DT(C283):DA(B265) DA(C284):DT(B264) DC(C285):DG(B263) DA(C286):DT(B262) chainA ( 47) VAL101 0 0 0 0 0 16 0 0 0 0 0 0 ( 48) PHE102 0 0 0 0 0 70 5 33 0 0 0 0 ( 50) LYS104 0 0 0 0 0 2 0 0 0 0 0 0 ( 68) TYR122 0 0 0 0 0 0 4 0 0 0 0 0 ( 70) PHE124 0 0 0 0 0 0 31 0 0 0 0 0 ( 71) SER125 0 0 0 0 0 0 4 0 0 0 0 0 (103) LEU157 0 0 0 0 0 0 3 0 0 0 0 0 (114) ILE168 0 0 0 0 0 0 3 0 0 0 0 0 (115) CYS169 0 0 0 0 0 10 0 0 0 0 0 0 (117) HIS171 0 0 0 0 0 0 47 0 0 0 0 0 (119) ASP173 0 0 0 0 0 0 1 0 0 0 0 0 (121) GLU175 0 0 0 0 0 0 1 0 0 0 0 0 (176) HIS236 0 0 0 0 0 0 1 0 0 0 0 0 (194) ARG254 0 0 0 0 0 0 5 0 0 0 0 0 prot.sequence hswrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgKwhsvprkqatygdagltYtFSgltlspkpwipvlerirdhvsgvtgqtfnfvLinrykdgsdhICeHrDdErelapgspiasvsfgasrdfvfrhkdsrrvavvrlplahgsllmmnhptnthwyHslpvrkkvlaprvnltfRkillta >3rzo_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIATION COMPLEX WITH A 4-NT RNA organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DC(T21) DT(T22) DC(T23) chainA (811) THR831 0 0 0 4 0 0 0 0 (1346) ARG1386 4 11 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi >3rzo_AB: title=RNA POLYMERASE II INITIATION COMPLEX WITH A 4-NT RNA organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DC(T21) DT(T22) DC(T23) chainA (811) THR831 0 0 0 4 0 0 0 0 (1346) ARG1386 4 11 0 0 0 0 0 0 chainB (1010) GLU1120 0 0 0 0 0 0 0 3 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvEgrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3s14_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIATION COMPLEX WITH A 6-NT RNA organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) chainA (427) GLN447 0 0 0 0 1 0 0 0 0 0 0 0 0 (428) PRO448 0 0 0 2 3 0 0 0 0 0 0 0 0 (811) THR831 0 0 0 4 0 0 0 0 0 0 0 0 0 (812) ALA832 0 0 0 3 0 0 0 0 0 0 0 0 0 (1346) ARG1386 9 9 0 0 0 0 0 0 0 0 0 0 0 (1347) HIS1387 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRHgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi >3s14_AB: title=RNA POLYMERASE II INITIATION COMPLEX WITH A 6-NT RNA organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) chainA (427) GLN447 0 0 0 0 1 0 0 0 0 0 0 0 0 (428) PRO448 0 0 0 2 3 0 0 0 0 0 0 0 0 (811) THR831 0 0 0 4 0 0 0 0 0 0 0 0 0 (812) ALA832 0 0 0 3 0 0 0 0 0 0 0 0 0 (1346) ARG1386 9 9 0 0 0 0 0 0 0 0 0 0 0 (1347) HIS1387 0 1 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRHgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiAKprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgEDviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3s15_AB: title=RNA POLYMERASE II INITIATION COMPLEX WITH A 7-NT RNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) chainA (427) GLN447 0 0 0 0 1 0 0 0 0 0 0 0 0 (428) PRO448 0 0 0 1 3 0 0 0 0 0 0 0 0 (811) THR831 0 0 0 6 0 0 0 0 0 0 0 0 0 (812) ALA832 0 0 0 3 0 0 0 0 0 0 0 0 0 (816) TYR836 0 5 0 0 0 0 0 0 0 0 0 0 0 (1346) ARG1386 11 9 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiAKprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgEDviiGkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3s16_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIATION COMPLEX WITH AN 8-NT RNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T27) DG(T26) DC(T25) DT(T24) DC(T23) DT(T22) DC(T21) DC(T20) DT(T19) DA(T18) DG(T17) DC(T16):DG(T17) chainA (427) GLN447 0 0 0 0 0 0 0 1 0 0 0 0 (428) PRO448 0 0 0 0 0 0 0 3 1 0 0 0 (811) THR831 0 0 0 0 0 0 0 0 2 0 0 0 (816) TYR836 0 0 0 0 0 0 0 0 0 0 4 4 (1082) LYS1102 0 0 0 0 0 0 0 0 0 0 1 1 (1346) ARG1386 0 0 0 0 0 0 0 0 0 0 3 4 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTaetgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlKeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi >3s16_AB: title=RNA POLYMERASE II INITIATION COMPLEX WITH AN 8-NT RNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T27) DG(T26) DC(T25) DT(T24) DC(T23) DT(T22) DC(T21) DC(T20) DT(T19) DA(T18) DG(T17) DC(T16):DG(T17) chainA (427) GLN447 0 0 0 0 0 0 0 1 0 0 0 0 (428) PRO448 0 0 0 0 0 0 0 3 1 0 0 0 (811) THR831 0 0 0 0 0 0 0 0 2 0 0 0 (816) TYR836 0 0 0 0 0 0 0 0 0 0 4 4 (1082) LYS1102 0 0 0 0 0 0 0 0 0 0 1 1 (1346) ARG1386 0 0 0 0 0 0 0 0 0 0 3 4 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTaetgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlKeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiAKprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgEdviiGkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiYqihipyaakllfqelmamnitprlytdrsrdf >3s17_AB: title=RNA POLYMERASE II INITIATION COMPLEX WITH A 9-NT RNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) chainA (330) ARG350 0 0 0 0 0 1 0 0 0 0 0 0 0 (427) GLN447 0 0 0 0 1 0 0 0 0 0 0 0 0 (428) PRO448 0 0 0 0 2 0 0 0 0 0 0 0 0 (812) ALA832 0 0 0 3 0 0 0 0 0 0 0 0 0 (816) TYR836 0 1 0 0 0 0 0 0 0 0 0 0 0 (1345) THR1385 0 1 0 0 0 0 0 0 0 0 0 0 0 (1346) ARG1386 8 11 0 0 0 0 0 0 0 0 0 0 0 (1347) HIS1387 0 2 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktAetgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvTRHgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddRdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiAKprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgeDviiGkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3s1m_AB: title=RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT RNA (VARIANT 1) organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DG(T21) DT(T22) DC(T23) chainA (811) THR831 0 0 0 4 0 0 0 0 (816) TYR836 0 1 0 0 0 0 0 0 (1346) ARG1386 4 2 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTaetgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgEdviiGkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3s1n_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT RNA (VARIANT 2) organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DG(T20) DC(T21) DT(T22):DC(T23) chainA (811) THR831 0 0 0 4 0 0 0 (812) ALA832 0 0 0 1 0 0 0 (816) TYR836 0 3 0 0 0 0 0 (1345) THR1385 0 1 0 0 0 0 0 (1346) ARG1386 8 10 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvTRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi >3s1n_AB: title=RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT RNA (VARIANT 2) organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DG(T20) DC(T21) DT(T22):DC(T23) chainA (811) THR831 0 0 0 4 0 0 0 (812) ALA832 0 0 0 1 0 0 0 (816) TYR836 0 3 0 0 0 0 0 (1345) THR1385 0 1 0 0 0 0 0 (1346) ARG1386 8 10 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvTRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgEDviiGkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3s1q_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT 3'-DEOXY RNA SOAKED WITH ATP organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T27) DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26):DA(T27) chainA (427) GLN447 0 0 0 0 0 1 0 0 0 0 0 0 (428) PRO448 0 0 0 0 0 2 0 0 0 0 0 0 (811) THR831 0 0 0 0 6 0 0 0 0 0 0 0 (812) ALA832 0 0 0 0 3 0 0 0 0 0 0 0 (1346) ARG1386 0 7 1 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi >3s1q_AB: title=RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT 3'-DEOXY RNA SOAKED WITH ATP organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T27) DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26):DA(T27) chainA (427) GLN447 0 0 0 0 0 1 0 0 0 0 0 0 (428) PRO448 0 0 0 0 0 2 0 0 0 0 0 0 (811) THR831 0 0 0 0 6 0 0 0 0 0 0 0 (812) ALA832 0 0 0 0 3 0 0 0 0 0 0 0 (1346) ARG1386 0 7 1 0 0 0 0 0 0 0 0 0 chainB (832) ARG942 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplRstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3s1r_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT 3'-DEOXY RNA SOAKED WITH GTP organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DC(T21) DT(T22) DC(T23) chainA (812) ALA832 0 0 0 1 0 0 0 0 (1346) ARG1386 4 4 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi >3s1r_AB: title=RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT 3'-DEOXY RNA SOAKED WITH GTP organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DC(T21) DT(T22) DC(T23) chainA (812) ALA832 0 0 0 1 0 0 0 0 (1346) ARG1386 4 4 0 0 0 0 0 0 chainB (1010) GLU1120 0 0 0 0 0 0 0 1 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvEgrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3s2d_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT RNA CONTAINING A 5BR- U organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DA(T21) DC(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) chainA (427) GLN447 0 0 0 0 1 0 0 0 0 0 0 0 0 (428) PRO448 0 0 0 0 4 0 0 0 0 0 0 0 0 (811) THR831 0 0 0 5 0 0 0 0 0 0 0 0 0 (812) ALA832 0 0 0 3 0 0 0 0 0 0 0 0 0 (1346) ARG1386 4 10 0 0 0 0 0 0 0 0 0 0 0 (1347) HIS1387 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRHgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi >3s2d_AB: title=RNA POLYMERASE II INITIATION COMPLEX WITH A 5-NT RNA CONTAINING A 5BR- U organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DA(T21) DC(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) chainA (427) GLN447 0 0 0 0 1 0 0 0 0 0 0 0 0 (428) PRO448 0 0 0 0 4 0 0 0 0 0 0 0 0 (811) THR831 0 0 0 5 0 0 0 0 0 0 0 0 0 (812) ALA832 0 0 0 3 0 0 0 0 0 0 0 0 0 (1346) ARG1386 4 10 0 0 0 0 0 0 0 0 0 0 0 (1347) HIS1387 0 1 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRHgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiAKprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgEDviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3s2h_AB: title=RNA POLYMERASE II INITIATION COMPLEX WITH A 6-NT RNA CONTAINING A 2[PRIME]-IODO ATP organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T16) DG(T17) DA(T18) DT(T19) DC(T20) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) chainA (300) ARG320 0 0 0 0 0 0 0 0 0 0 0 1 (428) PRO448 0 0 3 1 0 0 0 0 0 0 0 0 (816) TYR836 1 0 0 0 0 0 0 0 0 0 0 0 (1346) ARG1386 11 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgRpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlEgfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiaKprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviiGkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >3s3m_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND DOLUTEGRAVIR (S/GSK1349572) organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 10 14 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3s3n_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) S217H MUTANT INTASOME IN COMPLEX WITH MAGNESIUM AND DOLUTEGRAVIR (S/GSK1349572) organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 8 12 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQshgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3s3o_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) N224H MUTANT INTASOME IN COMPLEX WITH MAGNESIUM AND DOLUTEGRAVIR (S/GSK1349572) organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 12 8 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERkhsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >3s57_A:Clavaminate_synthase-like; title=ABH2 CROSS-LINKED WITH UNDAMAGED DSDNA-1 CONTAINING COFACTORS organism=Homo sapiens DNA sequence DC(C274):DG(B272) DG(C275):DC(B271) DC(C276):DG(B270) DA(C277):DT(B269) DG(C278):DC(B268) DT(C279):DA(B267) DG(C280):DC(B266) DA(C281):DT(B265) DT(C282):DA(B264) DG(C283):DC(B263) DA(C284):DT(B262) DC(C285):DG(B261) DA(C286):DT(B260) chainA ( 47) VAL101 0 0 0 0 0 8 6 0 0 0 0 0 0 ( 48) PHE102 0 0 0 0 0 50 50 0 0 0 0 0 0 (115) CYS169 0 0 0 0 0 5 0 0 0 0 0 0 0 prot.sequence mswrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgkwhsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhiCehrdderelapgspiasvsfgasrdfvfrhkdsrgkspsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3s5a_A:Clavaminate_synthase-like; title=ABH2 CROSS-LINKED TO UNDAMAGED DSDNA-2 WITH COFACTORS organism=Homo sapiens DNA sequence DC(C272):DG(B272) DG(C273):DC(B271) DA(C274):DT(B270) DC(C275):DG(B269) DA(C276):DT(B268) DG(C277):DC(B267) DT(C278):DA(B266) DG(C279):DC(B265) DA(C280):DT(B264) DG(C281):DC(B263) DA(C282):DT(B262) DC(C283):DG(B261) DA(C284):DT(B260) chainA ( 47) VAL101 0 0 0 0 0 0 6 6 0 0 0 0 0 ( 48) PHE102 0 0 0 0 0 0 51 52 0 0 0 0 0 (115) CYS169 0 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence mswrhiraegldssytvlfgkaeadeifqelekeveyftgalarvqVFgkwhsvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhiCehrdderelapgspiasvsfgasrdfvfrhkdsrgkspsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkill >3s6i_D:DNA-glycosylase; title=SCHIZOSACCAROMYCES POMBE 3-METHYLADENINE DNA GLYCOSYLASE (MAG1) IN COMPLEX WITH ABASIC-DNA. organism=Schizosaccharomyces pombe DNA sequence DA(F13):DT(E11) DG(F14):DC(E10) DA(F15):DT(E9) DC(F16):DG(E8) DT(F17):3DR(E7) DT(F18):DA(E6) DG(F19):DC(E5) DG(F20):DC(E4) DA(F21):DT(E3) DC(F22):DG(E2) chainD ( 47) GLN62 0 0 0 82 11 4 0 0 0 0 ( 48) LEU63 0 0 0 0 4 12 0 0 0 0 ( 49) HIS64 0 0 0 0 0 8 9 0 0 0 ( 52) ALA67 0 0 0 0 0 2 0 0 0 0 ( 89) SER104 0 0 0 0 1 0 0 0 0 0 ( 92) LYS107 0 0 0 0 1 0 0 0 0 0 prot.sequence tkaeihlsgldenwkrlvklvgnyrpnrsmekkepyeeliravasqQLHskAanaifnrfksisnngqfptpeeirdmdfeimracgfSarKidslksiaeatisgliptkeeaerlsneelierltqikgigrwtvemllifslnrddvmpaddlsirngyrylhrlpkiptkmyvlkhseicapfrtaaawylwktskladytkp >3s8q_A:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE R-M CONTROLLER PROTEIN C.ESP1396I OL OPERATOR COMPLEX organism=Enterobacter sp. RFL1396 DNA sequence DT(C2):DA(D19) DG(C3):DC(D18) DT(C4):DA(D17) DG(C5):DC(D16) DA(C6):DT(D15) DC(C7):DG(D14) DT(C8):DA(D13) DT(C9):DA(D12) DA(C10):DT(D11) DT(C11):DA(D10) DA(C12):DT(D9) DG(C13):DC(D8) DT(C14):DA(D7) DC(C15):DG(D6) DC(C16):DG(D5) DG(C17):DC(D4) DT(C18):DA(D3) DG(C19):DC(D2) chainA ( 24) GLU25 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 18 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 7 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 5 12 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgiernsRnltikslelimkglevsdvvffemlikeilk >3s8q_AB:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE R-M CONTROLLER PROTEIN C.ESP1396I OL OPERATOR COMPLEX organism=Enterobacter sp. RFL1396 DNA sequence DC(D2):DG(C19) DA(D3):DT(C18) DC(D4):DG(C17) DG(D5):DC(C16) DG(D6):DC(C15) DA(D7):DT(C14) DC(D8):DG(C13) DT(D9):DA(C12) DA(D10):DT(C11) DT(D11):DA(C10) DA(D12):DT(C9) DA(D13):DT(C8) DG(D14):DC(C7) DT(D15):DA(C6) DC(D16):DG(C5) DA(D17):DT(C4) DC(D18):DG(C3) DA(D19):DT(C2) chainA ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 18 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 7 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 3 12 5 0 0 0 0 chainB ( 32) ASP34 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG35 0 1 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR36 0 0 3 3 5 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) TYR37 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 37) SER39 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG43 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG46 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgiernsRnltikslelimkglevsdvvffemlikeilk/sfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkhd >3s9h_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TRIPLE MUTANT(L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPNPP AND A DIDEOXY-TERMINATED PRIMER IN THE PRESENCE OF CA2+ organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3sar_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SLANTED COMPLEX 1 organism=Geobacillus stearothermophilus DNA sequence DG(C4):DC(D14) DT(C5):DC(D13) DA(C6):DA(D12) DG(C7):DT(D11) DA(C8):DT(D9) DC(C9):DG(D8) DC(C10):DG(D7) DT(C11):DA(D6) DG(C12):DC(D5) DG(C13):DC(D4) DA(C14):DT(D3) DC(C15):DG(D2) chainA ( 75) ARG76 0 0 0 0 0 9 1 0 0 0 0 0 ( 76) MET77 0 0 0 0 0 0 8 6 0 0 0 0 (111) ARG112 0 0 0 0 0 0 0 4 14 3 0 0 (113) PHE114 0 0 0 0 0 0 39 17 0 0 0 0 (156) ARG157 0 0 1 0 0 0 0 0 0 0 0 0 (243) ARG264 0 0 0 0 2 5 0 0 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkRsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3sas_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SLANTED COMPLEX 4 WITH R112A MUTATION organism=Geobacillus stearothermophilus DNA sequence DT(B4):DC(C15) DA(B5):DA(C14) DG(B6):DT(C13) DA(B7):DC(C12) DC(B8):DG(C10) DT(B9):DA(C9) DC(B10):DG(C8) DG(B11):DC(C7) DG(B12):DC(C6) DA(B13):DT(C5) DC(B14):DG(C4) DG(B15):DC(C3) DC(B16):DG(C2) chainA ( 75) ARG76 0 0 0 0 0 6 1 0 0 0 0 0 0 ( 76) MET77 0 0 0 0 0 0 0 1 0 0 0 0 0 (113) PHE114 0 0 0 0 0 0 35 12 0 0 0 0 0 (243) ARG264 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvakFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3sat_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SLANTED COMPLEX 6 WITH R112A MUTATION organism=Geobacillus stearothermophilus DNA sequence DC(C5):DG(B11) DC(C6):DG(B10) DT(C7):DA(B9) DG(C8):DC(B8) DG(C9):DC(B7) DC(C11):DA(B6) DT(C12):DG(B5) chainA ( 75) ARG76 0 0 0 6 0 0 0 (113) PHE114 0 12 31 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRmegryavasaleplephthvvfcftdgselryrdvakFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmlyvygrqgnpckrcgtpiektvvagrgthycprcqr >3sau_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM INTERROGATION COMPLEX 6 organism=Geobacillus stearothermophilus DNA sequence DC(C5):DG(B12) DC(C6):DG(B11) DT(C7):DA(B10) DG(C8):DC(B9) DG(C9):DC(B8) DC(C11):DA(B7) DT(C12):DG(B6) DA(C13):DA(B5) DC(C14):DT(B4) chainA ( 75) ARG76 0 0 0 12 4 0 0 0 0 (111) ARG112 0 14 12 0 0 0 0 0 0 (113) PHE114 0 0 17 28 0 0 0 0 0 (241) ARG264 0 0 0 9 2 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRmegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3sav_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SLANTED COMPLEX 8 organism=Geobacillus stearothermophilus DNA sequence DG(C3):DC(D16) DT(C4):DC(D15) DA(C5):DA(D14) DG(C6):DT(D13) DA(C7):DT(D11) DC(C8):DG(D10) DA(C9):DT(D9) DA(C10):DT(D8) DG(C11):DC(D7) DG(C12):DC(D6) chainA ( 75) ARG76 0 0 0 0 0 7 0 0 0 0 ( 76) MET77 0 0 0 0 0 0 4 1 0 0 (111) ARG112 0 0 0 0 0 0 0 1 5 0 (113) PHE114 0 0 0 0 0 0 31 11 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagrgthycprcqr >3saw_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SLANTED COMPLEX 8 WITH R112A MUTATION organism=Geobacillus stearothermophilus DNA sequence DT(B4):DC(C13) DA(B5):DA(C12) DG(B6):DT(C11) DA(B7):DT(C9) DC(B8):DG(C8) DA(B9):DT(C7) DA(B10):DT(C6) DG(B11):DC(C5) chainA ( 75) ARG76 0 0 0 0 6 0 0 0 ( 76) MET77 0 0 0 0 0 1 4 0 (113) PHE114 0 0 0 0 0 37 11 0 (242) ARG264 0 0 0 8 4 1 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvakFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3sbj_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SLANTED COMPLEX 7 organism=Geobacillus stearothermophilus DNA sequence DG(B3):DC(C15) DT(B4):DC(C14) DA(B5):DA(C13) DG(B6):DT(C12) DA(B7):DT(C10) DC(B8):DG(C9) DC(B9):DG(C8) DA(B10):DT(C7) DG(B11):DC(C6) DG(B12):DC(C5) chainA ( 75) ARG76 0 0 0 0 0 2 0 0 0 0 ( 76) MET77 0 0 0 0 0 0 0 2 0 0 (113) PHE114 0 0 0 0 0 0 34 9 0 0 (156) ARG157 0 0 2 0 0 0 0 0 0 0 (242) ARG264 0 0 0 0 1 3 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvrkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkRsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3scx_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TRIPLE MUTANT(L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPNPP AND A DEOXY-TERMINATED PRIMER IN THE PRESENCE OF CA2+ organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DC(P115):DG(T5) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 6 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 (800) LYS800 0 0 0 0 4 3 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfaf >3si6_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TRIPLE MUTANT (L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPNPP AND A DEOXY-TERMINATED PRIMER IN THE PRESENCE OF MG2+ organism=Enterobacteria phage RB69 DNA sequence DG(T5):DC(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 0 7 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 1 0 0 0 0 0 0 0 0 (800) LYS800 0 0 0 0 0 0 1 6 4 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfaf >3si8_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX WITH THE 5'T OF A CPD IN THE ACTIVE SITE (TT2) organism=HOMO SAPIENS DNA sequence DC(T4):DA(P9) DA(T6):DT(P8) DT(T7):DA(P7) DG(T8):DC(P6) DA(T9):DT(P5) DC(T10):DG(P4) DG(T11):DC(P3) DC(T12):DG(P2) chainA ( 64) SER62 1 0 0 0 0 0 0 0 ( 66) TRP64 8 0 0 0 0 0 0 0 (373) LEU378 0 1 0 0 0 0 0 0 (374) SER379 0 0 0 0 1 0 0 0 (377) ARG382 0 0 0 0 0 2 8 0 (415) PHE423 0 0 1 0 0 0 0 0 prot.sequence phmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrSmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLSslRrccaltrydahkmshdaftvikncniqtewsppltmlFlcatkfs >3sjj_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TRIPLE MUTANT (L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPNPP AND A DEOXY-TERMINATED PRIMER IN THE PRESENCE OF MN2+ organism=Enterobacteria phage RB69 DNA sequence DG(T5):DC(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 0 5 6 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3sjm_A:Homeodomain-like; title=CRYSTAL STRUCTURE ANALYSIS OF TRF2-DBD-DNA COMPLEX organism=Homo sapiens DNA sequence DT(C2):DA(D18) DC(C3):DG(D17) DT(C4):DA(D16) DA(C5):DT(D15) DG(C6):DC(D14) DG(C7):DC(D13) DG(C8):DC(D12) DT(C9):DA(D11) DT(C10):DA(D10) DA(C11):DT(D9) DG(C12):DC(D8) DG(C13):DC(D7) DG(C14):DC(D6) DT(C15):DA(D5) DT(C16):DA(D4) DA(C17):DT(D3) DG(C18):DC(D2) chainA ( 2) LYS447 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 1 0 ( 40) VAL485 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 ( 43) LYS488 0 0 0 0 0 0 0 0 0 10 8 2 0 0 0 0 0 ( 44) ASP489 0 0 0 0 0 0 0 0 0 0 0 6 15 0 0 0 0 ( 47) ARG492 0 0 0 0 0 0 0 0 0 0 8 12 5 0 0 0 0 ( 48) THR493 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence kKqkwtveesewvkagvqkygegnwaaisknypfvnrtaVmiKDrwRTmkRlgmn >3sjm_AB:Homeodomain-like; title=CRYSTAL STRUCTURE ANALYSIS OF TRF2-DBD-DNA COMPLEX organism=Homo sapiens DNA sequence DC(D2):DG(C18) DT(D3):DA(C17) DA(D4):DT(C16) DA(D5):DT(C15) DC(D6):DG(C14) DC(D7):DG(C13) DC(D8):DG(C12) DT(D9):DA(C11) DA(D10):DT(C10) DA(D11):DT(C9) DC(D12):DG(C8) DC(D13):DG(C7) DC(D14):DG(C6) DT(D15):DA(C5) DA(D16):DT(C4) DG(D17):DC(C3) DA(D18):DT(C2) chainA ( 2) LYS447 0 1 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) VAL485 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 ( 43) LYS488 0 0 0 0 0 2 8 10 0 0 0 0 0 0 0 0 0 ( 44) ASP489 0 0 0 0 15 6 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG492 0 0 0 0 5 12 8 0 0 0 0 0 0 0 0 0 0 ( 48) THR493 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) LYS447 0 0 0 0 0 0 5 6 2 0 0 0 0 0 0 0 0 ( 40) VAL485 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 ( 43) LYS488 0 0 0 0 0 0 0 0 0 0 0 2 8 9 0 0 0 ( 44) ASP489 0 0 0 0 0 0 0 0 0 0 14 6 0 0 0 0 0 ( 47) ARG492 0 0 0 0 0 0 0 0 0 0 2 13 8 0 0 0 0 prot.sequence kKqkwtveesewvkagvqkygegnwaaisknypfvnrtaVmiKDrwRTmkRlgmn/kKqkwtveesewvkagvqkygegnwaaisknypfvnrtaVmiKDrwRTmkRlgmn >3slp_ABC:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF LAMBDA EXONUCLEASE IN COMPLEX WITH A 12 BP SYMMETRIC DNA DUPLEX organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DG(E1):DC(D12) DC(E2):DG(D11) DG(E3):DC(D10) DA(E4):DT(D9) DC(E5):DG(D8) DT(E6):DA(D7) DA(E7):DT(D6) DG(E8):DC(D5) DT(E9):DA(D4) DC(E10):DG(D3) DG(E11):DC(D2) DC(E12):DG(D1) chainA chainB ( 53) MET53 0 0 1 3 0 0 0 0 0 0 0 0 ( 73) VAL73 5 0 0 0 0 0 0 0 0 0 0 0 ( 75) ALA75 6 0 0 0 0 0 0 0 0 0 0 0 ( 77) ALA77 2 0 0 0 0 0 0 0 0 0 0 0 ( 78) LEU78 13 0 0 0 0 0 0 0 0 0 0 0 chainC ( 45) ARG45 0 0 0 0 0 0 0 8 10 2 0 0 prot.sequence mtpdiilqrtgidvraveqgddawhklrlgvitasevhnviakprsgkkwpdmkmsyfhtllaevctgvapevnakalawgkqyendartlfeftsgvnvtespiiyrdesmrtacspdglcsdgnglelkcpftsrdfmkfrlggfeaiksaymaqvqysmwvtrknawyfanydprmkreglhyvvierdekymasfdeivpefiekmdealaeigfvfgeqwr/mtpdiilqrtgidvraveqgddawhklrlgvitasevhnviakprsgkkwpdMkmsyfhtllaevctgvapeVnAkALawgkqyendartlfeftsgvnvtespiiyrdesmrtacspdglcsdgnglelkcpftsrdfmkfrlggfeaiksaymaqvqysmwvtrknawyfanydprmkreglhyvvierdekymasfdeivpefiekmdealaeigfvfgeqwr/mtpdiilqrtgidvraveqgddawhklrlgvitasevhnviakpRsgkkwpdmkmsyfhtllaevctgvapevnakalawgkqyendartlfeftsgvnvtespiiyrdesmrtacspdglcsdgnglelkcpftsrdfmkfrlggfeaiksaymaqvqysmwvtrknawyfanydprmkreglhyvvierdekymasfdeivpefiekmdealaeigfvfgeqwr >3slp_C:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF LAMBDA EXONUCLEASE IN COMPLEX WITH A 12 BP SYMMETRIC DNA DUPLEX organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DG(E1):DC(D12) DC(E2):DG(D11) DG(E3):DC(D10) DA(E4):DT(D9) DC(E5):DG(D8) DT(E6):DA(D7) DA(E7):DT(D6) DG(E8):DC(D5) DT(E9):DA(D4) DC(E10):DG(D3) DG(E11):DC(D2) DC(E12):DG(D1) chainC ( 45) ARG45 0 0 0 0 0 0 0 8 10 2 0 0 prot.sequence mtpdiilqrtgidvraveqgddawhklrlgvitasevhnviakpRsgkkwpdmkmsyfhtllaevctgvapevnakalawgkqyendartlfeftsgvnvtespiiyrdesmrtacspdglcsdgnglelkcpftsrdfmkfrlggfeaiksaymaqvqysmwvtrknawyfanydprmkreglhyvvierdekymasfdeivpefiekmdealaeigfvfgeqwr >3sm4_ABC:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF THE K131A MUTANT OF LAMBDA EXONUCLEASE IN COMPLEX WITH A 5'-PHOSPHORYLATED 14-MER/12-MER DUPLEX AND MAGNESIUM organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DT(D1):DA(E14) DC(D2):DG(E13) DG(D3):DC(E12) DG(D4):DC(E11) DT(D5):DA(E10) DA(D6):DT(E9) DC(D7):DG(E8) DA(D8):DT(E7) DG(D9):DC(E6) DT(D10):DA(E5) DA(D11):DT(E4) DG(D12):DC(E3) chainA chainB ( 55) MET53 0 0 0 0 0 0 0 0 1 3 0 0 ( 75) VAL73 0 0 0 0 0 0 0 0 0 0 0 7 ( 77) ALA75 0 0 0 0 0 0 0 0 0 0 0 4 ( 79) ALA77 0 0 0 0 0 0 0 0 0 0 0 3 ( 80) LEU78 0 0 0 0 0 0 0 0 0 0 0 18 chainC ( 48) ARG45 0 0 4 8 7 0 0 0 0 0 0 0 prot.sequence tpdiilqrtgidvraveqgddawhklrlgvitasevhnviakprsgkkwpdmkmsyfhtllaevctgvapevnakalawgkqyendartlfeftsgvnvtespiiyrdesmrtacspdglcsdgnglelacpftsrdfmkfrlggfeaiksaymaqvqysmwvtrknawyfanydprmkreglhyvvierdekymasfdeivpefiekmdealaeigfvfgeqwr/shmtpdiilqrtgidvraveqgddawhklrlgvitasevhnviakprsgkkwpdMkmsyfhtllaevctgvapeVnAkALawgkqyendartlfeftsgvnvtespiiyrdesmrtacspdglcsdgnglelacpftsrdfmkfrlggfeaiksaymaqvqysmwvtrknawyfanydprmkreglhyvvierdekymasfdeivpefiekmdealaeigfvfgeqwr/gshmtpdiilqrtgidvraveqgddawhklrlgvitasevhnviakpRsgkkwpdmkmsyfhtllaevctgvapevnakalawgkqyendartlfeftsgvnvtespiiyrdesmrtacspdglcsdgnglelacpftsrdfmkfrlggfeaiksaymaqvqysmwvtrknawyfanydprmkreglhyvvierdekymasfdeivpefiekmdealaeigfvfgeqwr >3sm4_B:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF THE K131A MUTANT OF LAMBDA EXONUCLEASE IN COMPLEX WITH A 5'-PHOSPHORYLATED 14-MER/12-MER DUPLEX AND MAGNESIUM organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DT(D1):DA(E14) DC(D2):DG(E13) DG(D3):DC(E12) DG(D4):DC(E11) DT(D5):DA(E10) DA(D6):DT(E9) DC(D7):DG(E8) DA(D8):DT(E7) DG(D9):DC(E6) DT(D10):DA(E5) DA(D11):DT(E4) DG(D12):DC(E3) chainB ( 55) MET53 0 0 0 0 0 0 0 0 1 3 0 0 ( 75) VAL73 0 0 0 0 0 0 0 0 0 0 0 7 ( 77) ALA75 0 0 0 0 0 0 0 0 0 0 0 4 ( 79) ALA77 0 0 0 0 0 0 0 0 0 0 0 3 ( 80) LEU78 0 0 0 0 0 0 0 0 0 0 0 18 prot.sequence shmtpdiilqrtgidvraveqgddawhklrlgvitasevhnviakprsgkkwpdMkmsyfhtllaevctgvapeVnAkALawgkqyendartlfeftsgvnvtespiiyrdesmrtacspdglcsdgnglelacpftsrdfmkfrlggfeaiksaymaqvqysmwvtrknawyfanydprmkreglhyvvierdekymasfdeivpefiekmdealaeigfvfgeqwr >3snn_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (L561A/S565G/Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE DG IN THE PRESENCE OF MG2+ organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 6 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfaf >3spd_A:HIT-like; title=CRYSTAL STRUCTURE OF APRATAXIN ORTHOLOG HNT3 IN COMPLEX WITH DNA organism=Schizosaccharomyces pombe DNA sequence DA(E2):DT(F14) DT(E3):DA(F13) DT(E4):DA(F12) DC(E5):DG(F11) DC(E6):DG(F10) DG(E7):DC(F9) DA(E8):DT(F8) DT(E9):DA(F7) DA(E10):DT(F6) DG(E11):DC(F5) DT(E12):DA(F4) DG(E13):DC(F3) DA(E14):DT(F2) chainA ( 2) PHE34 57 0 0 0 0 0 0 0 0 0 0 0 0 (110) SER142 5 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sFrdnlkvyiespesyknviyydddvvlvrdmfpkskmhlllmtrdphlthvhpleimmkhrslveklvsyvqgdlsglifdearnclsqqltnealanyikvgfhagpSmnnlhlhimtldhvspslknsahyisftspffvkidtptsnlptrgtltslfqedlkcwrcgetfgrhftklkahlqeeyddwldksvsm >3spd_AB:HIT-like; title=CRYSTAL STRUCTURE OF APRATAXIN ORTHOLOG HNT3 IN COMPLEX WITH DNA organism=Schizosaccharomyces pombe DNA sequence DA(E2):DT(F14) DT(E3):DA(F13) DT(E4):DA(F12) DC(E5):DG(F11) DC(E6):DG(F10) DG(E7):DC(F9) DA(E8):DT(F8) DT(E9):DA(F7) DA(E10):DT(F6) DG(E11):DC(F5) DT(E12):DA(F4) DG(E13):DC(F3) DA(E14):DT(F2) chainA ( 2) PHE34 57 0 0 0 0 0 0 0 0 0 0 0 0 (110) SER142 5 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) PHE34 0 0 0 0 0 0 0 0 0 0 0 0 49 (110) SER142 0 0 0 0 0 0 0 0 0 0 0 0 6 prot.sequence sFrdnlkvyiespesyknviyydddvvlvrdmfpkskmhlllmtrdphlthvhpleimmkhrslveklvsyvqgdlsglifdearnclsqqltnealanyikvgfhagpSmnnlhlhimtldhvspslknsahyisftspffvkidtptsnlptrgtltslfqedlkcwrcgetfgrhftklkahlqeeyddwldksvsm/sFrdnlkvyiespesyknviyydddvvlvrdmfpkskmhlllmtrdphlthvhpleimmkhrslveklvsyvqgdlsglifdearnclsqqltnealanyikvgfhagpSmnnlhlhimtldhvspslknsahyisftspffvkidtptsnlptrgtltslfqedlkcwrcgetfgrhftklkahlqeeyddwldksvsm >3spl_AB:HIT-like; title=CRYSTAL STRUCTURE OF APRATAXIN ORTHOLOG HNT3 IN COMPLEX WITH DNA AND AMP organism=Schizosaccharomyces pombe DNA sequence DA(E2):DT(F14) DT(E3):DA(F13) DT(E4):DA(F12) DC(E5):DG(F11) DC(E6):DG(F10) DG(E7):DC(F9) DA(E8):DT(F8) DT(E9):DA(F7) DA(E10):DT(F6) DG(E11):DC(F5) DT(E12):DA(F4) DG(E13):DC(F3) DA(E14):DT(F2) chainA ( 2) PHE34 55 0 0 0 0 0 0 0 0 0 0 0 0 (110) SER142 5 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) PHE34 0 0 0 0 0 0 0 0 0 0 0 0 50 (110) SER142 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence sFrdnlkvyiespesyknviyydddvvlvrdmfpkskmhlllmtrdphlthvhpleimmkhrslveklvsyvqgdlsglifdearnclsqqltnealanyikvgfhagpSmnnlhlhimtldhvspslknsahyisftspffvkidtptsnlptrgtltslfqedlkcwrcgetfgrhftklkahlqeeyddwldksvsm/sFrdnlkvyiespesyknviyydddvvlvrdmfpkskmhlllmtrdphlthvhpleimmkhrslveklvsyvqgdlsglifdearnclsqqltnealanyikvgfhagpSmnnlhlhimtldhvspslknsahyisftspffvkidtptsnlptrgtltslfqedlkcwrcgetfgrhftklkahlqeeyddwldksvsm >3spl_D:HIT-like; title=CRYSTAL STRUCTURE OF APRATAXIN ORTHOLOG HNT3 IN COMPLEX WITH DNA AND AMP organism=Schizosaccharomyces pombe DNA sequence DT(H2):DA(G14) DC(H3):DG(G13) DA(H4):DT(G12) DC(H5):DG(G11) DT(H6):DA(G10) DA(H7):DT(G9) DT(H8):DA(G8) DC(H9):DG(G7) DG(H10):DC(G6) DG(H11):DC(G5) DA(H12):DT(G4) DA(H13):DT(G3) DT(H14):DA(G2) chainD ( 2) PHE34 47 0 0 0 0 0 0 0 0 0 0 0 0 (110) SER142 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sFrdnlkvyiespesyknviyydddvvlvrdmfpkskmhlllmtrdphlthvhpleimmkhrslveklvsyvqgdlsglifdearnclsqqltnealanyikvgfhagpSmnnlhlhimtldhvspslknsahyisftspffvkidtptsnlptrgtltslfqedlkcwrcgetfgrhftklkahlqeeyddwldksvsm >3spy_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE(L415A/L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPCPP OPPOSITE DA organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DC(P115):DG(T5) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3spz_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA POLYMERASE(L415A/L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPCPP OPPOSITE DA (CA2+) organism=Enterobacteria phage RB69 DNA sequence DG(T5):DC(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 0 6 5 0 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3sq0_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA POLYMERASE(L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPNPP OPPOSITE DA (MN2+) organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 7 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3sq1_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DUPCPP OPPOSITE DA organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 7 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 0 0 0 0 0 0 0 0 (800) LYS800 0 0 0 0 0 0 3 1 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3sq2_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP OPPOSITE 2AP (AT RICH SEQUENCE) organism=Enterobacteria phage RB69 DNA sequence DA(T6):DT(P114) DA(T7):DT(P113) DT(T8):DA(P112) DT(T9):DA(P111) DA(T10):DT(P110) DA(T11):DT(P109) DT(T12):DA(P108) DT(T13):DA(P107) DA(T14):DT(P106) DA(T15):DT(P105) DT(T16):DA(P104) DT(T17):DA(P103) chainA (706) LYS706 4 5 0 0 0 0 0 0 0 0 0 0 (800) LYS800 0 0 0 0 0 1 6 3 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfd >3sq4_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP OPPOSITE 2AP (GC RICH SEQUENCE) organism=Enterobacteria phage RB69 DNA sequence DC(T6):DG(P114) DG(T7):DC(P113) DC(T8):DG(P112) DC(T9):DG(P111) DG(T10):DC(P110) DC(T11):DG(P109) DC(T12):DG(P108) DG(T13):DC(P107) DC(T14):DG(P106) DG(T15):DC(P105) DC(T16):DG(P104) DG(T17):DC(P103) chainA (706) LYS706 9 8 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygDTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfd >3sqi_A: title=DNA BINDING DOMAIN OF NDC10 organism=KLUYVEROMYCES LACTIS DNA sequence DT(B2):DA(C15) DA(B3):DT(C14) DA(B4):DT(C13) DT(B5):DA(C12) DT(B6):DA(C11) DT(B7):DA(C10) DA(B8):DT(C9) DT(B9):DA(C8) DA(B10):DT(C7) DA(B11):DT(C6) DA(B12):DT(C5) DA(B13):DT(C4) DT(B14):DA(C3) DT(B15):DA(C2) chainA (124) LYS128 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (233) LYS237 0 0 0 0 0 0 0 0 0 0 3 4 4 1 (242) LEU246 0 0 0 0 0 4 1 1 0 0 0 0 0 0 prot.sequence mskldsllkelptrtahlyrsiwhkytewlktmpddlklflsqkyivkyiashddiakdplptcdamiwfsraldienndvlvlqqrlyglvkllefdysnviailqkisinlwnpstdslqsKhfktcqdklkllldfqwkfntnvsfedrttvslkdlqcilddengkcglahsskpnfvlvpnfqspftcpiftmavyyylrfhgvkkyykgdgyqilsqlehipiirgKsldqypreLtlgnwyptifkycqlpytkkhwfqvnqewpqfpdfsesdsentigipdfyiekmnrtklqpcpqvhvhlfptdlppdiqavfdllnsvlvtslpllyrvfpthdifldpslktpqniafltgtlpldiesqehllaqlidktgtvs >3ssc_AB: title=DNA BINDING DOMAIN OF RESTRICTION ENDONUCLEASE BOUND TO DNA organism=Escherichia coli DNA sequence DG(D2):DC(C13) DC(D3):DG(C12) DT(D4):DA(C11) DA(D5):DT(C10) 5CM(D6):DG(C9) DC(D7):DG(C8) DG(D8):DC(C7) DG(D9):5CM(C6) DT(D10):DA(C5) DC(D11):DG(C4) DT(D12):DA(C3) DC(D13):DG(C2) chainA ( 20) GLN21 0 0 0 6 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 90 4 17 0 0 0 0 0 0 ( 42) ASN43 0 0 0 0 0 9 12 0 0 0 0 0 ( 48) TRP49 0 0 0 0 10 0 0 0 0 0 0 0 ( 58) ALA59 0 0 0 0 1 0 0 0 0 0 0 0 ( 59) SER60 0 0 0 0 1 0 0 0 0 0 0 0 ( 63) TYR64 0 0 0 0 13 0 0 0 0 0 0 0 ( 65) VAL66 0 0 0 0 1 0 0 0 0 0 0 0 ( 67) LEU68 0 0 0 0 1 0 0 0 0 0 0 0 ( 82) SER83 0 0 0 0 3 0 0 0 0 0 0 0 ( 83) ASP84 0 0 0 0 4 0 0 0 0 0 0 0 ( 84) THR85 0 0 0 0 5 0 0 0 0 0 0 0 (116) TYR117 0 0 0 0 31 0 0 0 0 0 0 0 (119) SER120 0 0 0 0 1 0 0 0 0 0 0 0 chainB ( 21) GLN21 0 0 0 0 0 0 0 0 2 0 0 0 ( 41) TYR41 0 0 0 0 0 0 28 4 46 0 0 0 ( 43) ASN43 0 0 0 0 0 6 18 0 0 0 0 0 ( 49) TRP49 0 0 0 0 0 0 0 10 0 0 0 0 ( 59) ALA59 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) SER60 0 0 0 0 0 0 0 1 0 0 0 0 ( 64) TYR64 0 0 0 0 0 0 0 14 0 0 0 0 ( 66) VAL66 0 0 0 0 0 0 0 1 0 0 0 0 ( 68) LEU68 0 0 0 0 0 0 0 1 0 0 0 0 ( 83) SER83 0 0 0 0 0 0 0 2 0 0 0 0 ( 84) ASP84 0 0 0 0 0 0 0 4 0 0 0 0 ( 85) THR85 0 0 0 0 0 0 0 4 0 0 0 0 (116) TYR117 0 0 0 0 0 0 0 31 0 0 0 0 (119) SER120 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence esiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipwfaflgegqeasngiypvilyykdfdelvlaygisdtnephaqwqfssdipktiaeyfqatsgvypkkygqsyyacsqkvsqgidytrfasmldniindyklifnsg/mesiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipwfaflgegqeasngiypvilyykdfdelvlaygisdtnephaqwqfsdipktiaeyfqatsgvypkkygqsyyacsqkvsqgidytrfasmldniindyklifnsg >3ssc_B: title=DNA BINDING DOMAIN OF RESTRICTION ENDONUCLEASE BOUND TO DNA organism=Escherichia coli DNA sequence DG(D2):DC(C13) DC(D3):DG(C12) DT(D4):DA(C11) DA(D5):DT(C10) 5CM(D6):DG(C9) DC(D7):DG(C8) DG(D8):DC(C7) DG(D9):5CM(C6) DT(D10):DA(C5) DC(D11):DG(C4) DT(D12):DA(C3) DC(D13):DG(C2) chainB ( 21) GLN21 0 0 0 0 0 0 0 0 2 0 0 0 ( 41) TYR41 0 0 0 0 0 0 28 4 46 0 0 0 ( 43) ASN43 0 0 0 0 0 6 18 0 0 0 0 0 ( 49) TRP49 0 0 0 0 0 0 0 10 0 0 0 0 ( 59) ALA59 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) SER60 0 0 0 0 0 0 0 1 0 0 0 0 ( 64) TYR64 0 0 0 0 0 0 0 14 0 0 0 0 ( 66) VAL66 0 0 0 0 0 0 0 1 0 0 0 0 ( 68) LEU68 0 0 0 0 0 0 0 1 0 0 0 0 ( 83) SER83 0 0 0 0 0 0 0 2 0 0 0 0 ( 84) ASP84 0 0 0 0 0 0 0 4 0 0 0 0 ( 85) THR85 0 0 0 0 0 0 0 4 0 0 0 0 (116) TYR117 0 0 0 0 0 0 0 31 0 0 0 0 (119) SER120 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mesiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipwfaflgegqeasngiypvilyykdfdelvlaygisdtnephaqwqfsdipktiaeyfqatsgvypkkygqsyyacsqkvsqgidytrfasmldniindyklifnsg >3ssd_AB: title=DNA BINDING DOMAIN OF RESTRICTION ENDONUCLEASE BOUND TO DNA organism=Escherichia coli DNA sequence DG(D2):DC(C13) DC(D3):DG(C12) DT(D4):DA(C11) DA(D5):DT(C10) DC(D6):DG(C9) DC(D7):DG(C8) DG(D8):DC(C7) DG(D9):5CM(C6) DT(D10):DA(C5) DC(D11):DG(C4) DT(D12):DA(C3) DC(D13):DG(C2) chainA ( 20) GLN21 0 0 0 6 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 90 3 13 0 0 0 0 0 0 ( 42) ASN43 0 0 0 0 0 9 8 0 0 0 0 0 ( 48) TRP49 0 0 0 0 10 0 0 0 0 0 0 0 ( 59) SER60 0 0 0 0 1 0 0 0 0 0 0 0 ( 63) TYR64 0 0 0 0 9 0 0 0 0 0 0 0 ( 82) SER83 0 0 0 0 2 0 0 0 0 0 0 0 ( 83) ASP84 0 0 0 0 3 0 0 0 0 0 0 0 ( 84) THR85 0 0 0 0 4 0 0 0 0 0 0 0 (116) TYR117 0 0 0 0 27 0 0 0 0 0 0 0 chainB ( 19) GLN21 0 0 0 0 0 0 0 0 1 0 0 0 ( 39) TYR41 0 0 0 0 0 0 30 2 42 0 0 0 ( 41) ASN43 0 0 0 0 0 6 18 0 0 0 0 0 ( 47) TRP49 0 0 0 0 0 0 0 12 0 0 0 0 ( 62) TYR64 0 0 0 0 0 0 0 9 0 0 0 0 ( 64) VAL66 0 0 0 0 0 0 0 1 0 0 0 0 ( 66) LEU68 0 0 0 0 0 0 0 1 0 0 0 0 ( 81) SER83 0 0 0 0 0 0 0 2 0 0 0 0 ( 82) ASP84 0 0 0 0 0 0 0 3 0 0 0 0 ( 83) THR85 0 0 0 0 0 0 0 4 0 0 0 0 (115) TYR117 0 0 0 0 0 0 0 29 0 0 0 0 prot.sequence esiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipWfaflgegqeaSngiYpvilyykdfdelvlaygiSDTnephaqwqfssdipktiaeyfqatsgvypkkYgqsyyacsqkvsqgidytrfasmldniindyklifnsgk/siqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipwfaflgegqeasngiypvilyykdfdelvlaygisdtnephaqwqfssdipktiaeyfqatsgvypkkygqsyyacsqkvsqgidytrfasmldniindykl >3ssd_B: title=DNA BINDING DOMAIN OF RESTRICTION ENDONUCLEASE BOUND TO DNA organism=Escherichia coli DNA sequence DG(D2):DC(C13) DC(D3):DG(C12) DT(D4):DA(C11) DA(D5):DT(C10) DC(D6):DG(C9) DC(D7):DG(C8) DG(D8):DC(C7) DG(D9):5CM(C6) DT(D10):DA(C5) DC(D11):DG(C4) DT(D12):DA(C3) DC(D13):DG(C2) chainB ( 19) GLN21 0 0 0 0 0 0 0 0 1 0 0 0 ( 39) TYR41 0 0 0 0 0 0 30 2 42 0 0 0 ( 41) ASN43 0 0 0 0 0 6 18 0 0 0 0 0 ( 47) TRP49 0 0 0 0 0 0 0 12 0 0 0 0 ( 62) TYR64 0 0 0 0 0 0 0 9 0 0 0 0 ( 64) VAL66 0 0 0 0 0 0 0 1 0 0 0 0 ( 66) LEU68 0 0 0 0 0 0 0 1 0 0 0 0 ( 81) SER83 0 0 0 0 0 0 0 2 0 0 0 0 ( 82) ASP84 0 0 0 0 0 0 0 3 0 0 0 0 ( 83) THR85 0 0 0 0 0 0 0 4 0 0 0 0 (115) TYR117 0 0 0 0 0 0 0 29 0 0 0 0 prot.sequence siqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipwfaflgegqeasngiypvilyykdfdelvlaygisdtnephaqwqfssdipktiaeyfqatsgvypkkygqsyyacsqkvsqgidytrfasmldniindykl >3sse_A: title=DNA BINDING DOMAIN OF RESTRICTION ENDONUCLEASE BOUND TO DNA organism=Escherichia coli DNA sequence DG(C2):DC(D13) DA(C3):DT(D12) DG(C4):DC(D11) DA(C5):DT(D10) DC(C6):DG(D9) DC(C7):DG(D8) DG(C8):DC(D7) DG(C9):DC(D6) DT(C10):DA(D5) DA(C11):DT(D4) DG(C12):DC(D3) DC(C13):DG(D2) chainA ( 20) GLN21 0 0 0 0 0 0 0 0 3 0 0 0 ( 40) TYR41 0 0 0 0 0 0 28 3 40 0 0 0 ( 42) ASN43 0 0 0 0 0 8 20 0 0 0 0 0 ( 48) TRP49 0 0 0 0 0 0 0 5 0 0 0 0 ( 58) ALA59 0 0 0 0 0 0 0 1 0 0 0 0 ( 63) TYR64 0 0 0 0 0 0 0 10 0 0 0 0 ( 82) SER83 0 0 0 0 0 0 0 3 0 0 0 0 ( 83) ASP84 0 0 0 0 0 0 0 4 0 0 0 0 ( 84) THR85 0 0 0 0 0 0 0 4 0 0 0 0 (116) TYR117 0 0 0 0 0 0 0 24 0 0 0 0 prot.sequence esiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipWfaflgegqeAsngiYpvilyykdfdelvlaygiSDTnephaqwqfssdipktiaeyfqatsgvypkkYgqsyyacsqkvsqgidytrfasmldniindyklifns >3sse_AB: title=DNA BINDING DOMAIN OF RESTRICTION ENDONUCLEASE BOUND TO DNA organism=Escherichia coli DNA sequence DG(C2):DC(D13) DA(C3):DT(D12) DG(C4):DC(D11) DA(C5):DT(D10) DC(C6):DG(D9) DC(C7):DG(D8) DG(C8):DC(D7) DG(C9):DC(D6) DT(C10):DA(D5) DA(C11):DT(D4) DG(C12):DC(D3) DC(C13):DG(D2) chainA ( 20) GLN21 0 0 0 0 0 0 0 0 3 0 0 0 ( 40) TYR41 0 0 0 0 0 0 28 3 40 0 0 0 ( 42) ASN43 0 0 0 0 0 8 20 0 0 0 0 0 ( 48) TRP49 0 0 0 0 0 0 0 5 0 0 0 0 ( 58) ALA59 0 0 0 0 0 0 0 1 0 0 0 0 ( 63) TYR64 0 0 0 0 0 0 0 10 0 0 0 0 ( 82) SER83 0 0 0 0 0 0 0 3 0 0 0 0 ( 83) ASP84 0 0 0 0 0 0 0 4 0 0 0 0 ( 84) THR85 0 0 0 0 0 0 0 4 0 0 0 0 (116) TYR117 0 0 0 0 0 0 0 24 0 0 0 0 chainB ( 20) GLN21 0 0 0 6 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 92 2 11 0 0 0 0 0 0 ( 42) ASN43 0 0 0 0 0 9 12 0 0 0 0 0 ( 48) TRP49 0 0 0 0 3 0 0 0 0 0 0 0 ( 58) ALA59 0 0 0 0 1 0 0 0 0 0 0 0 ( 63) TYR64 0 0 0 0 7 0 0 0 0 0 0 0 ( 82) SER83 0 0 0 0 1 0 0 0 0 0 0 0 ( 83) ASP84 0 0 0 0 3 0 0 0 0 0 0 0 ( 84) THR85 0 0 0 0 4 0 0 0 0 0 0 0 (116) TYR117 0 0 0 0 22 0 0 0 0 0 0 0 prot.sequence esiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipWfaflgegqeAsngiYpvilyykdfdelvlaygiSDTnephaqwqfssdipktiaeyfqatsgvypkkYgqsyyacsqkvsqgidytrfasmldniindyklifns/esiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipWfaflgegqeAsngiYpvilyykdfdelvlaygiSDTnephaqwqfssdipktiaeyfqatsgvypkkYgqsyyacsqkvsqgidytrfasmldniindyk >3sun_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DTTP OPPOSITE 2AP (AT RICH SEQUENCE) organism=Enterobacteria phage RB69 DNA sequence DA(T6):DT(P114) DA(T7):DT(P113) DT(T8):DA(P112) DT(T9):DA(P111) DA(T10):DT(P110) DA(T11):DT(P109) DT(T12):DA(P108) DT(T13):DA(P107) DA(T14):DT(P106) DA(T15):DT(P105) DT(T16):DA(P104) DT(T17):DA(P103) chainA (706) LYS706 5 7 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 1 1 0 0 0 0 0 0 0 0 (800) LYS800 0 0 0 0 0 3 4 5 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekka >3suo_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DTTP OPPOSITE 2AP (GC RICH SEQUENCE) organism=Enterobacteria phage RB69 DNA sequence DC(P103):DG(T17) DG(P104):DC(T16) DC(P105):DG(T15) DG(P106):DC(T14) DC(P107):DG(T13) DG(P108):DC(T12) DG(P109):DC(T11) DC(P110):DG(T10) DG(P111):DC(T9) DG(P112):DC(T8) DC(P113):DG(T7) DG(P114):DC(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 8 8 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygDtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdm >3sup_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE 2AP (GC RICH SEQUENCE) organism=Enterobacteria phage RB69 DNA sequence DC(T6):DG(P114) DG(T7):DC(P113) DC(T8):DG(P112) DC(T9):DG(P111) DG(T10):DC(P110) DC(T11):DG(P109) DC(T12):DG(P108) DG(T13):DC(P107) DC(T14):DG(P106) DG(T15):DC(P105) DC(T16):DG(P104) DG(T17):DC(P103) chainA (706) LYS706 9 7 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygDtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3suq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE 2AP (AT RICH SEQUENCE) organism=Enterobacteria phage RB69 DNA sequence DA(P103):DT(T17) DA(P104):DT(T16) DT(P105):DA(T15) DT(P106):DA(T14) DA(P107):DT(T13) DA(P108):DT(T12) DT(P109):DA(T11) DT(P110):DA(T10) DA(P111):DT(T9) DA(P112):DT(T8) DT(P113):DA(T7) DT(P114):DA(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 7 4 (800) LYS800 0 0 0 0 2 6 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkasl >3sv3_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH THE ARTIFICIAL BASE PAIR DNAM-D5SICSTP organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (248) LYS540 0 0 0 0 0 0 0 4 5 1 0 (281) ARG573 0 0 0 0 0 0 0 0 0 0 3 (288) ASN580 0 0 0 0 0 0 0 0 0 1 0 (291) ASN583 0 0 0 0 0 0 0 0 1 11 1 (492) HIS784 0 0 0 0 0 0 0 0 0 0 2 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3sv4_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN AN OPEN BINARY COMPLEX WITH DT AS TEMPLATING NUCLEOBASE organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) DOC(B112):DG(C205) DA(C202):DT(C204) chainA (248) LYS540 0 0 0 0 0 0 0 4 5 0 0 0 0 (281) ARG573 0 0 0 0 0 0 0 0 0 0 4 8 0 (288) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 0 (291) ASN583 0 0 0 0 0 0 0 0 1 10 1 0 0 (295) ARG587 0 0 0 0 0 0 0 0 0 0 2 2 0 (323) GLU615 0 0 0 0 0 0 0 0 0 0 0 0 7 (364) LYS663 0 0 0 0 0 0 0 0 0 0 0 0 3 (365) THR664 0 0 0 0 0 0 0 0 0 0 0 0 2 (368) PHE667 0 0 0 0 0 0 0 0 0 0 0 0 57 (372) TYR671 0 0 0 0 0 0 0 0 0 0 0 0 15 (382) GLU681 0 0 0 0 0 0 0 0 0 0 0 0 3 (455) GLN754 0 0 0 0 0 0 0 0 0 0 1 4 0 (485) HIS784 0 0 0 0 0 0 0 0 0 0 2 1 0 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvRtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmvdplmrraaKTinFgvlYgmsahrlsqElaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3swm_A:NAC_domain; title=THE NAC DOMAIN OF ANAC019 IN COMPLEX WITH DNA, GOLD DERIVATIVE organism=Arabidopsis thaliana DNA sequence DC(F2):DG(E26) DT(F3):DA(E25) DG(F4):DC(E24) DT(F5):DA(E23) DT(F6):DA(E22) DG(F7):DC(E21) DC(F8):DG(E20) DG(F9):DC(E19) DT(F10):DA(E18) DG(F11):DC(E17) DT(F13):DA(E15) DC(F14):DG(E14) DC(F15):DG(E13) DA(F16):DT(E12) DA(F17):DT(E11) DC(F18):DG(E10) DA(F19):DT(E9) DC(F20):DG(E8) DG(F21):DC(E7) DC(F22):DG(E6) DA(F23):DT(E5) DA(F24):DT(E4) DG(F25):DC(E3) DA(F26):DT(E2) chainA ( 73) ASN87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 ( 82) LYS96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 8 2 0 0 ( 83) ALA97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 84) THR98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 3 0 0 0 0 0 ( 86) THR100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (106) TYR120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (115) LYS129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence pltqlslppgfrfyptdeelmvqylcrkaagydfslqliaeidlykfdpwvlpnkalfgekewyffsprdrpNrvagsgywKATgTdkiistegqrvgikkalvfYigkapkgtKtnwimheyrliepsddwvlcriykkq >3swm_ABD:NAC_domain; title=THE NAC DOMAIN OF ANAC019 IN COMPLEX WITH DNA, GOLD DERIVATIVE organism=Arabidopsis thaliana DNA sequence DC(F2):DG(E26) DT(F3):DA(E25) DG(F4):DC(E24) DT(F5):DA(E23) DT(F6):DA(E22) DG(F7):DC(E21) DC(F8):DG(E20) DG(F9):DC(E19) DT(F10):DA(E18) DG(F11):DC(E17) DT(F13):DA(E15) DC(F14):DG(E14) DC(F15):DG(E13) DA(F16):DT(E12) DA(F17):DT(E11) DC(F18):DG(E10) DA(F19):DT(E9) DC(F20):DG(E8) DG(F21):DC(E7) DC(F22):DG(E6) DA(F23):DT(E5) DA(F24):DT(E4) DG(F25):DC(E3) DA(F26):DT(E2) chainA ( 73) ASN87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 ( 82) LYS96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 8 2 0 0 ( 83) ALA97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 84) THR98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 3 0 0 0 0 0 ( 86) THR100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (106) TYR120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (115) LYS129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainB ( 72) ASN87 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) LYS96 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ALA97 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) THR98 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) TYR120 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) PRO125 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) LYS129 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 83) THR98 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 85) THR100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (114) LYS129 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence pltqlslppgfrfyptdeelmvqylcrkaagydfslqliaeidlykfdpwvlpnkalfgekewyffsprdrpNrvagsgywKATgTdkiistegqrvgikkalvfYigkapkgtKtnwimheyrliepsddwvlcriykkq/pltqlslppgfrfyptdeelmvqylcrkaagydfslqliaeidlykfdpwvlpnkalfgekewyffsprdpNrvagsgywKATgtdkiistegqrvgikkalvfYigkaPkgtKtnwimheyrliepsddwvlcriykkq/pltqlslppgfrfyptdeelmvqylcrkaagydfslqliaeidlykfdpwvlpnkalfgekewyffsprdpnrvagsgywkaTgTdkiistegqrvgikkalvfyigkapkgtKtnwimheyrliepsddwvlcriykkq >3swp_A:NAC_domain; title=ANAC019 NAC DOMAIN IN COMPLEX WITH DNA organism=Arabidopsis thaliana DNA sequence DT(E2):DA(F26) DC(E3):DG(F25) DT(E4):DA(F24) DT(E5):DA(F23) DC(E7):DG(F21) DG(E8):DC(F20) DT(E9):DA(F19) DG(E10):DC(F18) DT(E11):DA(F17) DT(E12):DA(F16) DG(E13):DC(F15) DG(E14):DC(F14) DA(E15):DT(F13) DA(E16):DT(F12) DA(E18):DT(F10) DC(E19):DG(F9) DG(E20):DC(F8) DC(E21):DG(F7) DA(E23):DT(F5) DC(E24):DG(F4) DA(E25):DT(F3) DG(E26):DC(F2) chainA ( 73) ASN87 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LYS96 0 0 3 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) THR98 0 0 0 0 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) THR100 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) TYR120 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ALA124 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) PRO125 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) LYS129 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pltqlslppgfrfyptdeelmvqylcrkaagydfslqliaeidlykfdpwvlpnkalfgekewyffsprdrpNrvagsgywKaTgTdkiistegqrvgikkalvfYigkAPkgtKtnwimheyrliepsddwvlcriykkq >3swp_ABCD:NAC_domain; title=ANAC019 NAC DOMAIN IN COMPLEX WITH DNA organism=Arabidopsis thaliana DNA sequence DC(F2):DG(E26) DT(F3):DA(E25) DG(F4):DC(E24) DT(F5):DA(E23) DG(F7):DC(E21) DC(F8):DG(E20) DG(F9):DC(E19) DT(F10):DA(E18) DT(F12):DA(E16) DT(F13):DA(E15) DC(F14):DG(E14) DC(F15):DG(E13) DA(F16):DT(E12) DA(F17):DT(E11) DC(F18):DG(E10) DA(F19):DT(E9) DC(F20):DG(E8) DG(F21):DC(E7) DA(F23):DT(E5) DA(F24):DT(E4) DG(F25):DC(E3) DA(F26):DT(E2) chainA ( 73) ASN87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 ( 82) LYS96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 3 0 0 ( 84) THR98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 3 0 0 0 0 ( 86) THR100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (106) TYR120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (110) ALA124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (111) PRO125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (115) LYS129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB ( 72) ASN87 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) LYS96 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ALA97 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) THR98 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) TYR120 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 72) ASN87 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) LYS96 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 ( 82) ALA97 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 83) THR98 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 ( 85) THR100 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (105) TYR120 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (114) LYS129 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence pltqlslppgfrfyptdeelmvqylcrkaagydfslqliaeidlykfdpwvlpnkalfgekewyffsprdrpNrvagsgywKaTgTdkiistegqrvgikkalvfYigkAPkgtKtnwimheyrliepsddwvlcriykkq/pltqlslppgfrfyptdeelmvqylcrkaagydfslqliaeidlykfdpwvlpnkalfgekewyffsprdpNrvagsgywKATgtdkiistegqrvgikkalvfYigkapkgtktnwimheyrliepsddwvlcriykkq/lppgfrfyptdeelmvqylcrkaagydfslqliaeidlykfdpwvlpnkalfgekewyffsprdrpnrvagSgywkatgtDKIistegqrvgikkalvfyigkaPkgtktnwimheyrliepsddwvlcriykkq/pltqlslppgfrfyptdeelmvqylcrkaagydfslqliaeidlykfdpwvlpnkalfgekewyffsprdpNrvagsgywKATgTdkiistegqrvgikkalvfYigkapkgtKtnwimheyrliepsddwvlcriykkq >3syz_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN AN OPEN BINARY COMPLEX WITH DNAM AS TEMPLATING NUCLEOBASE organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) DOC(B112):DG(C205) chainA (248) LYS540 0 0 0 0 0 0 0 4 5 0 0 0 (281) ARG573 0 0 0 0 0 0 0 0 0 0 4 8 (288) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 (291) ASN583 0 0 0 0 0 0 0 0 1 11 1 0 (458) ASN750 0 0 0 0 0 0 0 0 0 0 0 1 (462) GLN754 0 0 0 0 0 0 0 0 0 0 1 4 (492) HIS784 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlYgmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3sz2_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN AN OPEN BINARY COMPLEX WITH DG AS TEMPLATING NUCLEOBASE organism=Thermus aquaticus DNA sequence DG(B101):DC(D216) DA(B102):DT(D215) DC(B103):DG(D214) DC(B104):DG(D213) DA(B105):DT(D212) DC(B106):DG(D211) DG(B107):DC(D210) DG(B108):DC(D209) DC(B109):DG(D208) DG(B110):DC(D207) DC(B111):DG(D206) DDG(B112):DC(D205) chainA (248) LYS540 0 0 0 0 0 0 0 4 5 0 0 0 (281) ARG573 0 0 0 0 0 0 0 0 0 0 3 11 (288) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 (291) ASN583 0 0 0 0 0 0 0 0 2 10 1 0 (295) ARG587 0 0 0 0 0 0 0 0 0 0 6 2 (369) TYR671 0 0 0 0 0 0 0 0 0 0 0 25 (452) GLN754 0 0 0 0 0 0 0 0 0 0 1 4 (482) HIS784 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvRtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetasdplmrraaktinfgvlYgmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3szq_A:HIT-like; title=STRUCTURE OF AN S. POMBE APTX/DNA/AMP/ZN COMPLEX organism=Schizosaccharomyces pombe DNA sequence DC(B1):DG(C14) DC(B2):DG(C13) DC(B3):DG(C12) DT(B4):DA(C11) DG(B5):DC(C10) chainA ( 3) PHE34 52 0 0 0 0 (111) SER142 4 0 0 0 0 (112) MET143 1 0 0 0 0 prot.sequence qsFrdnlkvyiespesyknviyydddvvlvrdmfpkskmhlllmtrdphlthvhpleimmkhrslveklvsyvqgdlsglifdearnclsqqltnealcnyikvgfhagpSMnnlhlhimtldhvspslknsahyisftspffvkidtptsnlptrgtltslfqedlkcwrcgetfgrhftklkahlqeeyddwldksv >3t3f_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY STRUCTURE OF THE LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO AN ABASIC SITE AND DNITP organism=Thermus aquaticus DNA sequence DG(C205):DOC(B112) DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (248) LYS540 0 0 1 5 4 0 0 0 0 0 0 0 (281) ARG573 8 4 0 0 0 0 0 0 0 0 0 0 (288) ASN580 0 0 1 0 0 0 0 0 0 0 0 0 (291) ASN583 0 1 10 0 0 0 0 0 0 0 0 0 (455) GLN754 4 0 0 0 0 0 0 0 0 0 0 0 (485) HIS784 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmvdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >3t5h_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF HNE ADDUCT MODIFIED DNA (5'-CXG-3' VS 13-MER) WITH DPO4 AND INCOMING DDGT organism=Sulfolobus solfataricus P2 DNA sequence DG(C501):DC(B418) DG(C502):DC(B417) DG(C503):DC(B416) DG(C504):DC(B415) DG(C505):DC(B414) DA(C506):DT(B413) DA(C507):DT(B412) DG(C508):DC(B411) DG(C509):DC(B410) DA(C510):DT(B409) DT(C511):DA(B408) DT(C512):DA(B407) DC(C513):DG(B406) chainA (336) ARG336 0 0 0 0 0 0 0 0 0 0 0 3 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3t5j_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF HNE ADDUCT MODIFIED DNA (5'-TXG-3' VS 13-MER) WITH DPO4 AND INCOMING DDTP organism=Sulfolobus solfataricus P2 DNA sequence DG(B406):DC(C513) DA(B407):DT(C512) DA(B408):DT(C511) DT(B409):DA(C510) DC(B410):DG(C509) DC(B411):DG(C508) DT(B412):DA(C507) DT(B413):DA(C506) DC(B414):DG(C505) DC(B415):DG(C504) DC(B416):DG(C503) DC(B417):DG(C502) DC(B418):DG(C501) chainA (336) ARG336 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3t5k_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF HNE ADDUCT MODIFIED DNA (5'-TXG-3' VS 14-MER) WITH DPO4 AND INCOMING DDTP organism=Sulfolobus solfataricus P2 DNA sequence DG(C501):DC(B418) DG(C502):DC(B417) DG(C503):DC(B416) DG(C504):DC(B415) DG(C505):DC(B414) DA(C506):DT(B413) DA(C507):DT(B412) DG(C508):DC(B411) DG(C509):DC(B410) DA(C510):DT(B409) DT(C511):DA(B408) DT(C512):DA(B407) DC(C513):DG(B406) DC(C514):DT(B404) chainA ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (336) ARG336 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3t5l_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF HNE ADDUCT MODIFIED DNA (5'-CXG-3' VS 14-MER) WITH DPO4 AND INCOMING DDGT organism=Sulfolobus solfataricus P2 DNA sequence DC(B404):DC(C514) DG(B406):DC(C513) DA(B407):DT(C512) DA(B408):DT(C511) DT(B409):DA(C510) DC(B410):DG(C509) DC(B411):DG(C508) DT(B412):DA(C507) DT(B413):DA(C506) DC(B414):DG(C505) DC(B415):DG(C504) DC(B416):DG(C503) DC(B417):DG(C502) DC(B418):DG(C501) chainA ( 32) VAL32 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >3t79_A: title=NDC10: A PLATFORM FOR INNER KINETOCHORE ASSEMBLY IN BUDDING YEAST organism=KLUYVEROMYCES LACTIS DNA sequence DT(B2):DA(C15) DA(B3):DT(C14) DA(B4):DT(C13) DT(B5):DA(C12) DT(B6):DA(C11) DT(B7):DA(C10) DA(B8):DT(C9) DT(B9):DA(C8) DA(B10):DT(C7) DA(B11):DT(C6) DA(B12):DT(C5) DA(B13):DT(C4) DT(B14):DA(C3) DT(B15):DA(C2) chainA (124) LYS128 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (233) LYS237 0 0 0 0 0 0 0 0 0 0 6 2 5 1 (242) LEU246 0 0 0 0 0 0 0 0 3 1 0 0 0 0 prot.sequence mskldsllkelptrtahlyrsiwhkytewlktmpddlklflsqkyivkyiashddiakdplptcdamiwfsraldienndvlvlqqrlyglvkllefdysnviailqkisinlwnpstdslqsKhfktcqdklkllldfqwkfntnvsfedrttvslkdlqcilddengkcglahsskpnfvlvpnfqspftcpiftmavyyylrfhgvkkyykgdgyqilsqlehipiirgKsldqypreLtlgnwyptifkycqlpytkkhwfqvnqewpqfpdfsesdsentigipdfyiekmnrtklqpcpqvhvhlfptdlppdiqavfdllnsvlvtslpllyrvfpthdifldpslktpqniafltgtlpldiesqehllaqlidktgtvs >3tab_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=5-HYDROXYCYTOSINE PAIRED WITH DGMP IN RB69 GP43 organism=Enterobacteria phage RB69 DNA sequence DG(J101):DC(I17) DC(J102):DG(I16) DG(J103):DC(I15) DG(J104):DC(I14) DC(J105):DG(I13) DT(J106):DA(I12) DG(J107):DC(I11) DT(J108):DA(I10) DC(J109):DG(I9) DA(J110):DT(I8) DT(J111):DA(I7) DA(J112):DT(I6) DC(J113):DG(I5) DC(J114):DG(I4) DG(J115):DC(I2) chainC (706) LYS706 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 (800) LYS800 0 0 0 0 0 0 3 4 3 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3tae_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=5-HYDROXYCYTOSINE PAIRED WITH DAMP IN RB69 GP43 organism=Enterobacteria phage RB69 DNA sequence DC(E2):DA(F115) DG(E4):DC(F114) DG(E5):DC(F113) DT(E6):DA(F112) DA(E7):DT(F111) DT(E8):DA(F110) DG(E9):DC(F109) DA(E10):DT(F108) DC(E11):DG(F107) DA(E12):DT(F106) DG(E13):DC(F105) DC(E14):DG(F104) DC(E15):DG(F103) DG(E16):DC(F102) DC(E17):DG(F101) chainA (219) GLU219 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) ASP275 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) PHE359 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvEsfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyiDlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvFspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >3taf_B:DNA/RNA_polymerases;Ribonuclease_H-like; title=5-FLUOROCYTOSINE PAIRED WITH DDGMP IN RB69 GP43 organism=Bacteriophage RB69 DNA sequence DG(H101):DC(G17) DC(H102):DG(G16) DG(H103):DC(G15) DG(H104):DC(G14) DC(H105):DG(G13) DT(H106):DA(G12) DG(H107):DC(G11) DT(H108):DA(G10) DC(H109):DG(G9) DA(H110):DT(G8) DT(H111):DA(G7) DA(H112):DT(G6) DC(H113):DG(G5) DC(H114):DG(G4) DG(H115):DC(G2) chainB (706) LYS706 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 (800) LYS800 0 0 0 0 0 0 6 6 2 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdfh >3tag_B:DNA/RNA_polymerases;Ribonuclease_H-like; title=5-FLUOROCYTOSINE PAIRED WITH DAMP IN RB69 GP43 organism=Enterobacteria phage RB69 DNA sequence DG(H101):DC(G17) DC(H102):DG(G16) DG(H103):DC(G15) DG(H104):DC(G14) DC(H105):DG(G13) DT(H106):DA(G12) DG(H107):DC(G11) DT(H108):DA(G10) DC(H109):DG(G9) DA(H110):DT(G8) DT(H111):DA(G7) DA(H112):DT(G6) DC(H113):DG(G5) chainB (706) LYS706 0 0 0 0 0 0 0 0 0 0 0 5 6 (734) LYS734 0 0 0 0 0 0 0 0 0 1 2 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3tan_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DUPLEX DNA WITH CYTOSINE-ADENINE MISMATCH AT (N-1) POSITION organism=GEOBACILLUS DNA sequence DG(B20):DC(C13) DC(B21):DG(C12) DG(B22):DC(C11) DA(B23):DT(C10) DT(B24):DA(C9) DC(B25):DG(C8) DA(B26):DT(C7) DC(B27):DG(C6) DG(B28):DC(C5) DC(B29):DA(C4) chainA (286) LYS582 0 0 0 0 0 1 5 0 0 0 (291) TYR587 0 0 0 0 0 0 0 1 0 0 (319) ARG615 0 0 0 0 0 0 0 0 3 7 (326) ASN622 0 0 0 0 0 0 0 1 0 0 (329) ASN625 0 0 0 0 0 0 1 7 1 0 (418) TYR714 0 0 0 0 0 0 0 0 0 54 (501) GLN797 0 0 0 0 0 0 0 0 0 4 (533) HIS829 0 0 0 0 0 0 0 0 1 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3tap_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DUPLEX DNA WITH CYTOSINE-ADENINE MISMATCH AT (N-3) POSITION organism=GEOBACILLUS DNA sequence DG(C4):DC(B29) DT(C5):DA(B28) DA(C6):DC(B27) DC(C7):DG(B26) DG(C8):DC(B25) DT(C9):DA(B24) DG(C10):DC(B23) DA(C11):DT(B22) DT(C12):DA(B21) DC(C13):DG(B20) DG(C14):DC(B19) chainA (286) LYS582 0 0 0 6 3 0 0 0 0 0 0 (319) ARG615 8 2 0 0 0 0 0 0 0 0 0 (329) ASN625 0 1 5 2 0 0 0 0 0 0 0 (418) TYR714 50 0 0 0 0 0 0 0 0 0 0 (501) GLN797 4 0 0 0 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3taq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DUPLEX DNA WITH CYTOSINE-ADENINE MISMATCH AT (N-4) POSITION organism=GEOBACILLUS DNA sequence DC(C4):DG(B29) DG(C5):DC(B28) DT(C6):DA(B27) DA(C7):DC(B26) DC(C8):DG(B25) DG(C9):DC(B24) DT(C10):DA(B23) DG(C11):DC(B22) DA(C12):DT(B21) DT(C13):DA(B20) DC(C14):DG(B19) chainA (286) LYS582 0 0 0 4 3 0 0 0 0 0 0 (291) TYR587 0 0 1 0 0 0 0 0 0 0 0 (319) ARG615 11 3 0 0 0 0 0 0 0 0 0 (329) ASN625 0 1 6 2 0 0 0 0 0 0 0 (333) ARG629 4 8 0 0 0 0 0 0 0 0 0 (418) TYR714 46 0 0 0 0 0 0 0 0 0 0 (501) GLN797 3 0 0 0 0 0 0 0 0 0 0 (533) HIS829 0 1 0 0 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3tar_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DUPLEX DNA WITH CYTOSINE-ADENINE MISMATCH AT (N-6) POSITION organism=GEOBACILLUS DNA sequence DG(B20):DC(C18) DC(B21):DG(C17) DG(B22):DC(C16) DA(B23):DT(C15) DT(B24):DA(C14) DC(B25):DG(C13) DA(B26):DT(C12) DC(B27):DG(C11) DG(B28):DC(C10) DC(B29):DA(C9) DA(B30):DT(C8) DC(B31):DG(C7) DG(B32):DC(C6) DT(B33):DA(C5) DC(B34):DG(C4) chainA (286) LYS582 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 (319) ARG615 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 (326) ASN622 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (329) ASN625 0 0 0 0 0 0 0 0 0 0 0 2 10 1 0 (418) TYR714 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55 (501) GLN797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3ted_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE CHD1 DNA-BINDING DOMAIN IN COMPLEX WITH A DNA DUPLEX organism=Saccharomyces cerevisiae DNA sequence DG(C1):DC(B12) DC(C2):DG(B11) DA(C3):DT(B10) DT(C4):DA(B9) DA(C5):DT(B8) DT(C6):DA(B7) DA(C7):DT(B6) DT(C8):DA(B5) DA(C9):DT(B4) DT(C10):DA(B3) DG(C11):DC(B2) DG(C12):DC(B1) chainA (108) ARG1113 7 2 0 0 0 0 0 0 0 0 0 0 (214) ILE1251 0 0 0 0 0 0 1 0 0 0 0 0 (218) ARG1255 0 0 0 10 0 0 0 0 0 0 0 0 prot.sequence dmdsigesevralykailkfgnlkeildeliadgtlpvksfekygetydemmeaakdcvheeeknrkeileklekhatayraklksgeikaenqpkdnpltrlslkkRekkavlfnfkgvkslnaesllsrvedlkylknlinsnykddplkfslgnntpkpvqnwssnwtkeedeklligvfkygygswtqirddpflgitdkiflkkvpgaIhlgRrvdyllsflrg >3tfr_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX STRUCTURE OF DNA POLYMERASE BETA WITH A GAPPED DNA SUBSTRATE AND A, B DAMP(CF2)PP IN THE ACTIVE SITE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 36 ( 26) LYS35 0 0 0 0 6 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3tfs_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX STRUCTURE OF DNA POLYMERASE BETA WITH A GAPPED DNA SUBSTRATE AND A, B DAMP(CFH)PP IN THE ACTIVE SITE: STEREOSELECTIVE BINDING OF (S) ISOMER organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >3thv_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DNA AND DDATP-DT IN CLOSED CONFORMATION organism=GEOBACILLUS DNA sequence DC(E21):DG(F12) DC(E22):DG(F11) DT(E23):DA(F10) DG(E24):DC(F9) DA(E25):DT(F8) DC(E26):DG(F7) DT(E27):DA(F6) DC(E28):DG(F5) chainD (285) LYS582 0 0 0 0 6 7 0 0 (318) ARG615 0 0 0 0 0 0 0 4 (328) ASN625 0 0 0 0 0 3 4 1 (332) ARG629 0 0 0 0 0 0 0 8 (500) GLN797 0 0 0 0 0 0 0 1 (532) HIS829 0 0 0 0 0 0 0 2 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3thw_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MUTSBETA COMPLEXED WITH AN IDL OF 4 BASES (LOOP4) AND ADP organism=HOMO SAPIENS DNA sequence DC(D1):DG(D53) DC(D2):DG(D52) DT(D3):DA(D51) DC(D4):DG(D50) DT(D5):DA(D49) DA(D6):DT(D48) DT(D7):DA(D47) DC(D8):DG(D46) DT(D9):DA(D45) DG(D10):DC(D44) DA(D11):DT(D43) DA(D12):DT(D42) DG(D13):DC(D41) DC(D14):DG(D40) DA(D39) DC(D38) DA(D37) DC(D36) DC(D15):DG(D35) DG(D16):DC(D34) DA(D17):DT(D33) DT(D18):DA(D32) DC(D19):DG(D31) DG(D20):DC(D30) DA(D21):DT(D29) DT(D22):DA(D28) DG(D23):DC(D27) DA(D24):DG(D26) DA(D25) chainA (522) ASN547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 chainB ( 30) TYR245 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 ( 31) LYS246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 64) HIS279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) SER314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 prot.sequence lesaaevgfvrffqgmpekptttvrlfdrgdfytahgedallaarevfktqgvikymgpagaknlqsvvlskmnfesfvkdlllvrqyrvevyknraskendwylaykaspgnlsqfedilfgnndmigvvgvkmsavdgqrqvgvgyvdsiqrklglcefpdndqfsnlealliqigpkecvlpggetagdmgklrqiiqrggiliterkkadfstkdiyqdlnrllkgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfqgssqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssagyyfrvtckeekvlrnnknfstvdiqkNgvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqdeiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvglkgvstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleefqmepaakkcylereqgekiiqeflskvkqmpftemseenitiklkqlkaeviaknnsfvneiisri/sksiytplelqyiemkqqhkdavlcvecgYKyrffgedaeiaarelniychldhnfmtasiptHrlfvhvrrlvakgykvgvvkqtetaalkaigdnrSslfsrkltalytkstligedvnpliklavnvdeimtdtstsyllcisenkenkkkgnifigivgvqpatgevvfdsfqdsasrseletrmsslqpvelllpsalseqtealihratsvsvqddrirvermdniyfeyshafqavtefyakgivnlekpvicslaaiikylkefnlekmlskpenfkqlsskmefmtingttlrnleilqnqtdmktkgsllwvldhtktsfgrrklkkwvtqpllklreinarldavsevlhsessvfgqienhlrklpdierglcsiyhkkcstqefflivktlyhlksefqaiipavnshiqsdllrtvileipellspvehylkilneqaakvgdktelfkdlsdfplikkrkdeiqgvideirmhlqeirkilknpsaqyvtvsgqefmieiknsavsciptdwvkvgstkavsrfhspfivenyrhlnqlreqlvldcsaewldflekfsehyhslckavhhlatvdcifslakvakqgdycrptvqeerkivikngrhpvidvllgeqdqyvpnntdlsedservmiitgpnmggkssyikqvalitimaqigsyvpaeeatigivdgiftrmgaagrstfmeeltdtaeiirkatsqslvildelgrgtsthdgiaiayatleyfirdvksltlfvthyppvceleknyshqvgnyhmgflvfvtflyqitrgiaarsyglnvakladvpgeilkkaahkskeleglintkrkrlkyfaklwtmhnaqdlqkwt >3thw_B:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MUTSBETA COMPLEXED WITH AN IDL OF 4 BASES (LOOP4) AND ADP organism=HOMO SAPIENS DNA sequence DC(D1):DG(D53) DC(D2):DG(D52) DT(D3):DA(D51) DC(D4):DG(D50) DT(D5):DA(D49) DA(D6):DT(D48) DT(D7):DA(D47) DC(D8):DG(D46) DT(D9):DA(D45) DG(D10):DC(D44) DA(D11):DT(D43) DA(D12):DT(D42) DG(D13):DC(D41) DC(D14):DG(D40) DA(D39) DC(D38) DA(D37) DC(D36) DC(D15):DG(D35) DG(D16):DC(D34) DA(D17):DT(D33) DT(D18):DA(D32) DC(D19):DG(D31) DG(D20):DC(D30) DA(D21):DT(D29) DT(D22):DA(D28) DG(D23):DC(D27) DA(D24):DG(D26) DA(D25) chainB ( 30) TYR245 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 ( 31) LYS246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 64) HIS279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) SER314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 prot.sequence sksiytplelqyiemkqqhkdavlcvecgYKyrffgedaeiaarelniychldhnfmtasiptHrlfvhvrrlvakgykvgvvkqtetaalkaigdnrSslfsrkltalytkstligedvnpliklavnvdeimtdtstsyllcisenkenkkkgnifigivgvqpatgevvfdsfqdsasrseletrmsslqpvelllpsalseqtealihratsvsvqddrirvermdniyfeyshafqavtefyakgivnlekpvicslaaiikylkefnlekmlskpenfkqlsskmefmtingttlrnleilqnqtdmktkgsllwvldhtktsfgrrklkkwvtqpllklreinarldavsevlhsessvfgqienhlrklpdierglcsiyhkkcstqefflivktlyhlksefqaiipavnshiqsdllrtvileipellspvehylkilneqaakvgdktelfkdlsdfplikkrkdeiqgvideirmhlqeirkilknpsaqyvtvsgqefmieiknsavsciptdwvkvgstkavsrfhspfivenyrhlnqlreqlvldcsaewldflekfsehyhslckavhhlatvdcifslakvakqgdycrptvqeerkivikngrhpvidvllgeqdqyvpnntdlsedservmiitgpnmggkssyikqvalitimaqigsyvpaeeatigivdgiftrmgaagrstfmeeltdtaeiirkatsqslvildelgrgtsthdgiaiayatleyfirdvksltlfvthyppvceleknyshqvgnyhmgflvfvtflyqitrgiaarsyglnvakladvpgeilkkaahkskeleglintkrkrlkyfaklwtmhnaqdlqkwt >3thx_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MUTSBETA COMPLEXED WITH AN IDL OF 3 BASES (LOOP3) AND ADP organism=HOMO SAPIENS DNA sequence DT(D3):DG(E50) DC(D4):DG(E49) DT(D5):DA(E48) DA(D6):DT(E47) DT(D7):DA(E46) DC(D8):DG(E45) DT(D9):DA(E44) DG(D10):DC(E43) DA(D11):DT(E42) DA(D12):DT(E41) DG(D13):DC(E40) DC(D14):DG(E39) DC(D15):DG(E35) DG(D16):DC(E34) DA(D17):DT(E33) DT(D18):DA(E32) DC(D19):DG(E31) DG(D20):DC(E30) DA(D21):DT(E29) DT(D22):DA(E28) DG(D23):DC(E27) chainA ( 30) ASP41 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 31) PHE42 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 ( 68) VAL79 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 70) SER81 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB ( 29) TYR245 0 0 0 0 0 0 0 0 0 0 0 43 45 0 0 0 0 0 0 0 0 ( 30) LYS246 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 prot.sequence esaaevgfvrffqgmpekptttvrlfdrgDFytahgedallaarevfktqgvikymgpagaknlqsvVlSkmnfesfvkdlllvrqyrvevyknraskendwylaykaspgnlsqfedilfigvvgvkmsavdgqrqvgvgyvdsiqrklglcefpdndqfsnlealliqigpkecvlpggetagdmgklrqiiqrggiliterkkadfstkdiyqdlnrllkgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfqqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssagyyfrvtckeekvlrnnknfstvdiqgvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvgstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleefqykcylereqgekiiqeflskvkqmpftemseenitiklkqlkaeviaknnsfvneiisri/ksiytplelqyiemkqqhkdavlcvecgYKyrffgedaeiaarelniychldhnfmtasipthrlfvhvrrlvakgykvgvvkqtetaalkaigdnrsslfsrkltalytkstligedvnpliklavnvdeimtdtstsyllcisenknifigivgvqpatgevvfdsfqdsasrseletrmsslqpvelllpsalseqtealihratsvsvqddrirvermdniyfeyshafqavtefyaivnlekpvicslaaiikylkefnlekmlskpenfkqlsskmefmtingttlrnleilqnqtdmktkgsllwvldhtktsfgrrklkkwvtqpllklreinarldavsevlhsessvfgqienhlrklpdierglcsiyhkkcstqefflivktlyhlksefqaiipavnshiqsdllrtvileipellspvehylkilneqaakvgdktelfkdlsdfplikkrkdeiqgvideirmhlqeirkilknpsaqyvtvsgqefmieiknsavsciptdwvkvgstkavsrfhspfivenyrhlnqlreqlvldcsaewldflekfsehyhslckavhhlatvdcifslakvakqgdycrptvqeerkivikngrhpvidvllgeqdqyvpnntdlsedservmiitgpnmggkssyikqvalitimaqigsyvpaeeatigivdgiftrmstfmeeltdtaeiirkatsqslvildelgrgtsthdgiaiayatleyfirdvksltlfvthyppvceleknyshqvgnyhmgflvsvtflyqitrgiaarsyglnvakladvpgeilkkaahkskeleglintkrkrlkyfaklwtmhnaqdlqkwteefnme >3thx_B:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MUTSBETA COMPLEXED WITH AN IDL OF 3 BASES (LOOP3) AND ADP organism=HOMO SAPIENS DNA sequence DT(D3):DG(E50) DC(D4):DG(E49) DT(D5):DA(E48) DA(D6):DT(E47) DT(D7):DA(E46) DC(D8):DG(E45) DT(D9):DA(E44) DG(D10):DC(E43) DA(D11):DT(E42) DA(D12):DT(E41) DG(D13):DC(E40) DC(D14):DG(E39) DC(D15):DG(E35) DG(D16):DC(E34) DA(D17):DT(E33) DT(D18):DA(E32) DC(D19):DG(E31) DG(D20):DC(E30) DA(D21):DT(E29) DT(D22):DA(E28) DG(D23):DC(E27) chainB ( 29) TYR245 0 0 0 0 0 0 0 0 0 0 0 43 45 0 0 0 0 0 0 0 0 ( 30) LYS246 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 prot.sequence ksiytplelqyiemkqqhkdavlcvecgYKyrffgedaeiaarelniychldhnfmtasipthrlfvhvrrlvakgykvgvvkqtetaalkaigdnrsslfsrkltalytkstligedvnpliklavnvdeimtdtstsyllcisenknifigivgvqpatgevvfdsfqdsasrseletrmsslqpvelllpsalseqtealihratsvsvqddrirvermdniyfeyshafqavtefyaivnlekpvicslaaiikylkefnlekmlskpenfkqlsskmefmtingttlrnleilqnqtdmktkgsllwvldhtktsfgrrklkkwvtqpllklreinarldavsevlhsessvfgqienhlrklpdierglcsiyhkkcstqefflivktlyhlksefqaiipavnshiqsdllrtvileipellspvehylkilneqaakvgdktelfkdlsdfplikkrkdeiqgvideirmhlqeirkilknpsaqyvtvsgqefmieiknsavsciptdwvkvgstkavsrfhspfivenyrhlnqlreqlvldcsaewldflekfsehyhslckavhhlatvdcifslakvakqgdycrptvqeerkivikngrhpvidvllgeqdqyvpnntdlsedservmiitgpnmggkssyikqvalitimaqigsyvpaeeatigivdgiftrmstfmeeltdtaeiirkatsqslvildelgrgtsthdgiaiayatleyfirdvksltlfvthyppvceleknyshqvgnyhmgflvsvtflyqitrgiaarsyglnvakladvpgeilkkaahkskeleglintkrkrlkyfaklwtmhnaqdlqkwteefnme >3thy_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MUTSBETA COMPLEXED WITH AN IDL OF 2 BASES (LOOP2) AND ADP organism=HOMO SAPIENS DNA sequence DC(E27):DG(D23) DA(E28):DT(D22) DT(E29):DA(D21) DC(E30):DG(D20) DG(E31):DC(D19) DA(E32):DT(D18) DT(E33):DA(D17) DC(E34):DG(D16) DG(E35):DC(D15) DG(E38):DC(D14) DC(E39):DG(D13) DT(E40):DA(D12) DT(E41):DA(D11) DC(E42):DG(D10) DA(E43):DT(D9) DG(E44):DC(D8) DA(E45):DT(D7) DT(E46):DA(D6) DA(E47):DT(D5) DG(E48):DC(D4) DG(E49):DT(D3) chainA (524) ASN547 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 29) TYR245 0 0 0 0 0 0 0 0 19 46 0 0 0 0 0 0 0 0 0 0 0 ( 30) LYS246 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PRO277 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 63) HIS279 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 prot.sequence saaevgfvrffqgmpekptttvrlfdrgdfytahgedallaarevfktqgvikymgpagaknlqsvvlskmnfesfvkdlllvrqyrvevyknraskendwylaykaspgnlsqfedilfgnndmssigvvgvkmsavdgqrqvgvgyvdsiqrklglcefpdndqfsnlealliqigpkecvlpggetagdmgklrqiiqrggiliterkkadfstkdiyqdlnrllkgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfqgssqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssaqfgyyfrvtckeekvlrnnknfstvdiqkNgvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqdeiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvgstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleefqykcylereqgekiiqeflskvkqmpftemseenitiklkqlkaeviaknnsfvneiisri/ksiytplelqyiemkqqhkdavlcvecgYKyrffgedaeiaarelniychldhnfmtasiPtHrlfvhvrrlvakgykvgvvkqtetaalkaigdnrsslfsrkltalytkstligedvnpliklavnvdeimtdtstsyllcisenknifigivgvqpatgevvfdsfqdsasrseletrmsslqpvelllpsalseqtealihratsvsvqddrirvermdniyfeyshafqavtefyakgivnlekpvicslaaiikylkefnlekmlskpenfkqlsskmefmtingttlrnleilqnqtdmktkgsllwvldhtktsfgrrklkkwvtqpllklreinarldavsevlhsessvfgqienhlrklpdierglcsiyhkkcstqefflivktlyhlksefqaiipavnshiqsdllrtvileipellspvehylkilneqaakvgdktelfkdlsdfplikkrkdeiqgvideirmhlqeirkilknpsaqyvtvsgqefmieiknsavsciptdwvkvgstkavsrfhspfivenyrhlnqlreqlvldcsaewldflekfsehyhslckavhhlatvdcifslakvakqgdycrptvqeerkivikngrhpvidvllgeqdqyvpnntdlsedservmiitgpnmggkssyikqvalitimaqigsyvpaeeatigivdgiftrmgastfmeeltdtaeiirkatsqslvildelgrgtsthdgiaiayatleyfirdvksltlfvthyppvceleknyshqvgnyhmgflvsfvtflyqitrgiaarsyglnvakladvpgeilkkaahkskeleglintkrkrlkyfaklwtmhnaqdlqkwteefnme >3thy_B:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MUTSBETA COMPLEXED WITH AN IDL OF 2 BASES (LOOP2) AND ADP organism=HOMO SAPIENS DNA sequence DT(D3):DG(E49) DC(D4):DG(E48) DT(D5):DA(E47) DA(D6):DT(E46) DT(D7):DA(E45) DC(D8):DG(E44) DT(D9):DA(E43) DG(D10):DC(E42) DA(D11):DT(E41) DA(D12):DT(E40) DG(D13):DC(E39) DC(D14):DG(E38) DC(D15):DG(E35) DG(D16):DC(E34) DA(D17):DT(E33) DT(D18):DA(E32) DC(D19):DG(E31) DG(D20):DC(E30) DA(D21):DT(E29) DT(D22):DA(E28) DG(D23):DC(E27) chainB ( 29) TYR245 0 0 0 0 0 0 0 0 0 0 0 46 19 0 0 0 0 0 0 0 0 ( 30) LYS246 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 61) PRO277 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 63) HIS279 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 prot.sequence ksiytplelqyiemkqqhkdavlcvecgYKyrffgedaeiaarelniychldhnfmtasiPtHrlfvhvrrlvakgykvgvvkqtetaalkaigdnrsslfsrkltalytkstligedvnpliklavnvdeimtdtstsyllcisenknifigivgvqpatgevvfdsfqdsasrseletrmsslqpvelllpsalseqtealihratsvsvqddrirvermdniyfeyshafqavtefyakgivnlekpvicslaaiikylkefnlekmlskpenfkqlsskmefmtingttlrnleilqnqtdmktkgsllwvldhtktsfgrrklkkwvtqpllklreinarldavsevlhsessvfgqienhlrklpdierglcsiyhkkcstqefflivktlyhlksefqaiipavnshiqsdllrtvileipellspvehylkilneqaakvgdktelfkdlsdfplikkrkdeiqgvideirmhlqeirkilknpsaqyvtvsgqefmieiknsavsciptdwvkvgstkavsrfhspfivenyrhlnqlreqlvldcsaewldflekfsehyhslckavhhlatvdcifslakvakqgdycrptvqeerkivikngrhpvidvllgeqdqyvpnntdlsedservmiitgpnmggkssyikqvalitimaqigsyvpaeeatigivdgiftrmgastfmeeltdtaeiirkatsqslvildelgrgtsthdgiaiayatleyfirdvksltlfvthyppvceleknyshqvgnyhmgflvsfvtflyqitrgiaarsyglnvakladvpgeilkkaahkskeleglintkrkrlkyfaklwtmhnaqdlqkwteefnme >3thz_A:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MUTSBETA COMPLEXED WITH AN IDL OF 6 BASES (LOOP6) AND ADP organism=HOMO SAPIENS DNA sequence DC(E27):DG(D23) DA(E28):DT(D22) DT(E29):DA(D21) DC(E30):DG(D20) DG(E31):DC(D19) DA(E32):DT(D18) DT(E33):DA(D17) DC(E34):DG(D16) DG(E35):DC(D15) DC(E36):DC(D14) DA(E37):DG(D13) DC(E38):DA(D12) DA(E39):DA(D11) DC(E40):DG(D10) DA(E41):DT(D9) DG(E42):DC(D8) DC(E43):DT(D7) DT(E44):DA(D6) DT(E45):DT(D5) DC(E46):DC(D4) chainA ( 31) ASP41 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 32) PHE42 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 ( 69) VAL79 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 71) SER81 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence lesaaevgfvrffqgmpekptttvrlfdrgDFytahgedallaarevfktqgvikymgpagaknlqsvVlSkmnfesfvkdlllvrqyrvevyknraskendwylaykaspgnlsqfedilfgnndmigvvgvkmsavdgqrqvgvgyvdsiqrklglcefpdndqfsnlealliqigpkecvlpggetagdmgklrqiiqrggiliterkkadfstkdiyqdlnrllkgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfqgssqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssagyyfrvtckeekvlrnnknfstvdiqgvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqdeiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvglkgvstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleefqmepaakkcylereqgekiiqeflskvkqmpftemseenitiklkqlkaeviaknnsfvneiisri >3thz_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MUTSBETA COMPLEXED WITH AN IDL OF 6 BASES (LOOP6) AND ADP organism=HOMO SAPIENS DNA sequence DC(D4):DG(E52) DT(D5):DA(E51) DA(D6):DT(E50) DT(D7):DA(E49) DC(D8):DG(E48) DT(D9):DA(E47) DG(D10):DC(E46) DA(D11):DT(E45) DA(D12):DT(E44) DG(D13):DC(E43) DC(D14):DG(E42) DC(D15):DA(E41) DG(D16):DC(E40) DA(D17):DA(E39) DT(D18):DC(E38) DC(D19):DA(E37) DG(D20):DC(E36) DA(D21):DG(E35) DT(D22):DC(E34) DG(D23):DT(E33) chainA ( 31) ASP41 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 32) PHE42 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 ( 69) VAL79 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 71) SER81 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainB ( 30) TYR245 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 2 0 19 0 0 ( 31) LYS246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 ( 62) PRO277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence lesaaevgfvrffqgmpekptttvrlfdrgDFytahgedallaarevfktqgvikymgpagaknlqsvVlSkmnfesfvkdlllvrqyrvevyknraskendwylaykaspgnlsqfedilfgnndmigvvgvkmsavdgqrqvgvgyvdsiqrklglcefpdndqfsnlealliqigpkecvlpggetagdmgklrqiiqrggiliterkkadfstkdiyqdlnrllkgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfqgssqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssagyyfrvtckeekvlrnnknfstvdiqgvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqdeiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvglkgvstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleefqmepaakkcylereqgekiiqeflskvkqmpftemseenitiklkqlkaeviaknnsfvneiisri/sksiytplelqyiemkqqhkdavlcvecgYKyrffgedaeiaarelniychldhnfmtasiPthrlfvhvrrlvakgykvgvvkqtetaalkaigdnrsslfsrkltalytkstligedvnptdtstsyllcisenkkkkgnifigivgvqpatgevvfdsfqdsasrseletrmsslqpvelllpsalseqtealihratsvsvqddrirvermdniyfeyshafqavtefyakgivnlekpvicslaaiikylkefnlekmlskpenfkqlsskmefmtingttlrnleilqnqtdmktkgsllwvldhtktsfgrrklkkwvtqpllklreinarldavsevlhsessvfgqienhlrklpdierglcsiyhkkcstqefflivktlyhlksefqaiipavnshiqsdllrtvileipellspvehylkilneqaakvgdktelfkdlsdfplikkrkdeiqgvideirmhlqeirkilknpsaqyvtvsgqefmieiknsavsciptdwvkvgstkavsrfhspfivenyrhlnqlreqlvldcsaewldflekfsehyhslckavhhlatvdcifslakvakqgdycrptvqeerkivikngrhpvidvllgeqdqyvpnntdlsedservmiitgpnmggkssyikqvalitimaqigsyvpaeeatigivdgiftrmgaagrstfmeeltdtaeiirkatsqslvildelgrgtsthdgiaiayatleyfirdvksltlfvthyppvceleknyshqvgnyhmgflvfvtflyqitrgiaarsyglnvakladvpgeilkkaahkskeleglintkrkrlkyfaklwtmhnaqdlqkwt >3ti0_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DNA AND DDGTP-DC IN CLOSED CONFORMATION organism=GEOBACILLUS SP. DNA sequence DC(B21):DG(C12) DC(B22):DG(C11) DT(B23):DA(C10) DG(B24):DC(C9) DA(B25):DT(C8) DC(B26):DG(C7) DT(B27):DA(C6) DC(B28):DG(C5) DDG(B29):DC(C4) DG3(A201):DC(C3) chainA (285) LYS582 0 0 0 0 5 7 0 0 0 0 (318) ARG615 0 0 0 0 0 0 0 4 12 0 (328) ASN625 0 0 0 0 0 3 4 1 0 0 (332) ARG629 0 0 0 0 0 0 0 8 4 0 (356) ASP653 0 0 0 0 0 0 0 0 0 6 (358) SER655 0 0 0 0 0 0 0 0 0 2 (359) GLN656 0 0 0 0 0 0 0 0 0 3 (360) ILE657 0 0 0 0 0 0 0 0 0 2 (385) HIS682 0 0 0 0 0 0 0 0 0 8 (405) ARG702 0 0 0 0 0 0 0 0 0 7 (409) LYS706 0 0 0 0 0 0 0 0 0 15 (410) ALA707 0 0 0 0 0 0 0 0 0 2 (413) TYR710 0 0 0 0 0 0 0 0 0 21 (417) TYR714 0 0 0 0 0 0 0 0 0 9 (419) ILE716 0 0 0 0 0 0 0 0 0 4 (496) ASN793 0 0 0 0 0 0 0 0 1 1 (500) GLN797 0 0 0 0 0 0 0 1 4 0 (532) HIS829 0 0 0 0 0 0 0 2 0 0 (533) ASP830 0 0 0 0 0 0 0 0 0 6 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnygivYgIsdyglaqNlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >3tmm_A:HMG-box; title=TFAM IMPOSES A U-TURN ON MITOCHONDRIAL DNA organism=Homo sapiens DNA sequence DA(C1):DT(B28) DC(C2):DG(B27) DT(C3):DA(B26) DT(C4):DA(B25) DT(C5):DA(B24) DT(C6):DA(B23) DA(C7):DT(B22) DA(C8):DT(B21) DC(C9):DG(B20) DA(C10):DT(B19) DG(C11):DC(B18) DT(C12):DA(B17) DC(C13):DG(B16) DA(C14):DT(B15) DC(C15):DG(B14) DC(C16):DG(B13) DC(C17):DG(B12) DC(C18):DG(B11) DC(C19):DG(B10) DC(C20):DG(B9) DA(C21):DT(B8) DA(C22):DT(B7) DC(C23):DG(B6) DT(C24):DA(B5) DA(C25):DT(B4) DA(C26):DT(B3) DC(C27):DG(B2) DA(C28):DT(B1) chainA ( 10) LYS10 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) SER13 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR15 0 0 0 0 0 0 0 6 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU16 0 0 0 0 0 0 0 12 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) SER19 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LEU23 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR35 0 0 0 0 0 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR36 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ILE39 0 0 0 0 0 0 0 0 7 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) MET101 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) LYS105 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 6 3 0 0 0 (120) TYR120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 (121) ASN121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 (124) VAL124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (128) PHE128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (136) PRO136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 (137) GLN137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 (140) LEU140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 7 0 0 0 0 0 0 0 prot.sequence ssvlascpkKpvSsYLrfSkeqLpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkaMtkkKeltllgkpkRprsaYNvyVaerFqeakgdsPQekLktvkenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllrrtikk >3tq1_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA IN BINARY COMPLEX WITH DNA organism=Homo sapiens DNA sequence DA(T6):DT(P9) DT(T7):DA(P8) DG(T8):DC(P7) DA(T9):DT(P6) DC(T10):DG(P5) DG(T11):DC(P4) DC(T12):DG(P3) DT(T13):DA(P2) chainA ( 61) ARG61 1 0 0 0 0 0 0 0 (316) SER322 0 1 0 0 0 0 0 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgtvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftviknmntstewsppltmlflcatkfsas >3tq6_AB:HMG-box; title=CRYSTAL STRUCTURE OF HUMAN MITOCHONDRIAL TRANSCRIPTION FACTOR A, TFAM OR MTTFA, BOUND TO THE LIGHT STRAND PROMOTER LSP organism=Homo sapiens DNA sequence DA(C3):DT(D20) DC(C4):DG(D19) DA(C5):DT(D18) DG(C6):DC(D17) DT(C7):DA(D16) DC(C8):DG(D15) DA(C9):DT(D14) DC(C10):DG(D13) DC(C11):DG(D12) DC(C12):DG(D11) DC(C13):DG(D10) DC(C14):DG(D9) DC(C15):DG(D8) DA(C16):DT(D7) DA(C17):DT(D6) DC(C18):DG(D5) BRU(E19):DT(D3) DA(C21):DT(D2) DC(C22):DG(D1) DT(E1):DA(F22) DA(E2):DT(F21) DA(E3):DT(F20) DC(E4):DG(F19) DA(E5):DT(F18) DG(E6):DC(F17) DT(E7):DA(F16) DC(E8):DG(F15) DA(E9):DT(F14) DC(E10):DG(F13) DC(E11):DG(F12) DC(E12):DG(F11) DC(E13):DG(F10) DC(E14):DG(F9) DC(E15):DG(F8) DA(E16):DT(F7) DA(E17):DT(F6) DC(E18):DG(F5) BRU(E19):DA(F4) DA(E20):DT(F3) DA(E21):DT(F2) DC(E22):DG(F1) chainA ( 12) SER55 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR57 3 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LEU58 15 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) SER61 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU65 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR77 0 0 2 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR78 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ILE81 0 5 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) MET143 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) LYS147 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) TYR162 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) ASN163 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) VAL166 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) PHE170 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) PRO178 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) GLN179 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) LEU182 0 0 0 0 0 0 0 0 0 0 0 0 15 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) THR234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 12) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LEU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ILE81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ARG140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) MET143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (104) LYS147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 7 4 0 0 (119) TYR162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 (120) ASN163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 (123) VAL166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (127) PHE170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (135) PRO178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 (136) GLN179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 (139) LEU182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 8 0 0 0 0 0 0 prot.sequence svlascpkkpvSsYLrfSkeqLpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkaMtkkKeltllgkpkRprSaYNvyVaerFqeakgdsPQekLktvkenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllrRTikk/svlascpkkpvSsYLrfSkeqLpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkRkaMtkkKeltllgkpkRprSaYNvyVaerFqeakgdsPQekLktvkenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllrr >3tq6_B:HMG-box; title=CRYSTAL STRUCTURE OF HUMAN MITOCHONDRIAL TRANSCRIPTION FACTOR A, TFAM OR MTTFA, BOUND TO THE LIGHT STRAND PROMOTER LSP organism=Homo sapiens DNA sequence DA(C3):DT(D20) DC(C4):DG(D19) DA(C5):DT(D18) DG(C6):DC(D17) DT(C7):DA(D16) DC(C8):DG(D15) DA(C9):DT(D14) DC(C10):DG(D13) DC(C11):DG(D12) DC(C12):DG(D11) DC(C13):DG(D10) DC(C14):DG(D9) DC(C15):DG(D8) DA(C16):DT(D7) DA(C17):DT(D6) DC(C18):DG(D5) BRU(E19):DT(D3) DA(C21):DT(D2) DC(C22):DG(D1) DT(E1):DA(F22) DA(E2):DT(F21) DA(E3):DT(F20) DC(E4):DG(F19) DA(E5):DT(F18) DG(E6):DC(F17) DT(E7):DA(F16) DC(E8):DG(F15) DA(E9):DT(F14) DC(E10):DG(F13) DC(E11):DG(F12) DC(E12):DG(F11) DC(E13):DG(F10) DC(E14):DG(F9) DC(E15):DG(F8) DA(E16):DT(F7) DA(E17):DT(F6) DC(E18):DG(F5) BRU(E19):DA(F4) DA(E20):DT(F3) DA(E21):DT(F2) DC(E22):DG(F1) chainB ( 12) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LEU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ILE81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ARG140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) MET143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (104) LYS147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 7 4 0 0 (119) TYR162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 (120) ASN163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 (123) VAL166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (127) PHE170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (135) PRO178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 (136) GLN179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 (139) LEU182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 8 0 0 0 0 0 0 prot.sequence svlascpkkpvSsYLrfSkeqLpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkRkaMtkkKeltllgkpkRprSaYNvyVaerFqeakgdsPQekLktvkenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllrr >3ts8_A:p53-like_transcription_factors;p53_tetramerization_domain; title=CRYSTAL STRUCTURE OF A MULTIDOMAIN HUMAN P53 TETRAMER BOUND TO THE NATURAL CDKN1A(P21) P53-RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DA(K3):DT(L50) DG(K4):DC(L49) DG(K5):DC(L48) DA(K6):DT(L47) DA(K7):DT(L46) DC(K8):DG(L45) DA(K9):DT(L44) DT(K10):DA(L43) DG(K11):DC(L42) DT(K12):DA(L41) DC(K13):DG(L40) DC(K14):DG(L39) DC(K15):DG(L38) DA(K16):DT(L37) DA(K17):DT(L36) DC(K18):DG(L35) DA(K19):DT(L34) DT(K20):DA(L33) DG(K21):DC(L32) DT(K22):DA(L31) DT(K23):DA(L30) DG(K24):DC(L29) DA(K25):DT(L28) DG(K26):DC(L27) chainA (155) ARG248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 2 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnRrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat >3ts8_ABCD:p53-like_transcription_factors;p53_tetramerization_domain; title=CRYSTAL STRUCTURE OF A MULTIDOMAIN HUMAN P53 TETRAMER BOUND TO THE NATURAL CDKN1A(P21) P53-RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DA(K3):DT(L50) DG(K4):DC(L49) DG(K5):DC(L48) DA(K6):DT(L47) DA(K7):DT(L46) DC(K8):DG(L45) DA(K9):DT(L44) DT(K10):DA(L43) DG(K11):DC(L42) DT(K12):DA(L41) DC(K13):DG(L40) DC(K14):DG(L39) DC(K15):DG(L38) DA(K16):DT(L37) DA(K17):DT(L36) DC(K18):DG(L35) DA(K19):DT(L34) DT(K20):DA(L33) DG(K21):DC(L32) DT(K22):DA(L31) DT(K23):DA(L30) DG(K24):DC(L29) DA(K25):DT(L28) DG(K26):DC(L27) chainA (155) ARG248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 2 0 0 0 0 chainB ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 (155) ARG248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 chainC ( 27) LYS120 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 12 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (155) ARG248 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 9 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnRrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat/sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnRrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat/sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnrrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat/sssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnRrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat >3twm_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain; title=CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA FPG organism=Arabidopsis thaliana DNA sequence DC(C17):DG(D15) DG(C18):DC(D14) DT(C19):DA(D13) DC(C20):DG(D12) DC(C21):DG(D11) DA(C22):DT(D10) 3DR(C23):DG(D9) DG(C24):DC(D8) DT(C25):DA(D7) DC(C26):DG(D6) DT(C27):DA(D5) DA(C28):DT(D4) DC(C29):DG(D3) DC(C30):DG(D2) chainA ( 77) MET78 0 0 0 0 0 0 0 12 0 0 0 0 0 0 (108) ARG126 0 0 0 0 0 68 16 1 0 0 0 0 0 0 (110) PHE128 0 0 0 0 0 0 19 27 0 0 0 0 0 0 (249) ARG267 0 0 0 0 0 0 0 8 0 0 0 0 0 0 prot.sequence pelpeveaarraieenclgkkikrviiaddnkvihgispsdfqtsilgktiisarrkgknlwleldsppfpsfqfgMagaiyikwpskyskffvelddglelsftdkRrFakvrllanptsvspiselgpdallepmtvdefaeslakkkitikpllldqgyisgignwiadevlyqarihplqtasslskeqcealhtsikeviekavevdadssqfpsnwifhnrekkpgkafvdgkkidfitaggRttayvpelqkly >3u2b_C:HMG-box; title=STRUCTURE OF THE SOX4 HMG DOMAIN BOUND TO DNA organism=Mus musculus DNA sequence DG(A1):DC(B16) DT(A2):DA(B15) DC(A3):DG(B14) DT(A4):DA(B13) DC(A5):DG(B12) DT(A6):DA(B11) DA(A7):DT(B10) DT(A8):DA(B9) DT(A9):DA(B8) DG(A10):DC(B7) DT(A11):DA(B6) DC(A12):DG(B5) DC(A13):DG(B4) DT(A14):DA(B3) DG(A15):DC(B2) DG(A16):DC(B1) chainC ( 5) ARG5 0 0 0 0 0 0 0 0 1 12 9 2 0 0 0 0 ( 8) ASN8 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 ( 10) PHE10 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 ( 11) MET11 0 0 0 0 0 0 0 9 12 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 ( 29) HIS29 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 ( 30) ASN30 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 ( 31) ALA31 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 34) SER34 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 ( 72) TYR72 0 0 0 0 0 0 0 0 0 3 8 2 0 0 0 0 prot.sequence ghikRpmNaFMvwsqieRrkimeqspdmHNAeiSkrlgkrwkllkdsdkipfiqeaerlrlkhmadypdykYrprk >3u3w_AB:lambda_repressor-like_DNA-binding_domains;TPR-like; title=CRYSTAL STRUCTURE OF BACILLUS THURINGIENSIS PLCR IN COMPLEX WITH THE PEPTIDE PAPR7 AND DNA organism=Bacillus thuringiensis DNA sequence DC(Y1):DG(Z18) DT(Y2):DA(Z17) DA(Y3):DT(Z16) DT(Y4):DA(Z15) DG(Y5):DC(Z14) DC(Y6):DG(Z13) DA(Y7):DT(Z12) DA(Y8):DT(Z11) DT(Y9):DA(Z10) DA(Y10):DT(Z9) DT(Y11):DA(Z8) DT(Y12):DA(Z7) DT(Y13):DA(Z6) DC(Y14):DG(Z5) DA(Y15):DT(Z4) DT(Y16):DA(Z3) DA(Y17):DT(Z2) DT(Y18):DA(Z1) chainA ( 28) HIS30 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN31 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER32 0 0 0 5 5 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) GLU33 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER35 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG36 0 0 0 13 8 7 2 0 0 0 0 0 0 0 0 0 0 0 ( 40) VAL42 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainB ( 28) HIS30 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 ( 29) GLN31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 0 ( 30) SER32 0 0 0 0 0 0 0 0 0 0 0 0 5 4 5 0 0 0 ( 31) GLU33 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 ( 33) SER35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 ( 34) ARG36 0 0 0 0 0 0 0 0 0 0 0 3 12 9 13 0 0 0 ( 40) VAL42 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence aeklgseikkirvlrgltqkqlsenicHQSEvSRiesgaVypsmdilqgiaaklqipiihfyevliysdierkkqfkdqvimlckqkrykeiynkvwnelkkeeyhpefqqflqwqyyvaayvlkkvdyeycilelkkllnqqltgidvyqnlyienaianiyaengylkkgidlfeqilkqlealhdneefdvkvrynhakalyldsryeeslyqvnkaieiscrinsmaligqlyyqrgeclrkleyeeaeiedaykkasfffdilemhaykealvnk/aeklgseikkirvlrgltqkqlsenicHQSEvSRiesgaVypsmdilqgiaaklqipiihfyevliysdierkkqfkdqvimlckqkrykeiynkvwnelkkeeyhpefqqflqwqyyvaayvlkkvdyeycilelkkllnqqltgidvyqnlyienaianiyaengylkkgidlfeqilkqlealhdneefdvkvrynhakalyldsryeeslyqvnkaieiscrinsmaligqlyyqrgeclrkleyeeaeiedaykkasfffdilemhaykealvnk >3u3w_B:lambda_repressor-like_DNA-binding_domains;TPR-like; title=CRYSTAL STRUCTURE OF BACILLUS THURINGIENSIS PLCR IN COMPLEX WITH THE PEPTIDE PAPR7 AND DNA organism=Bacillus thuringiensis DNA sequence DA(Z1):DT(Y18) DT(Z2):DA(Y17) DA(Z3):DT(Y16) DT(Z4):DA(Y15) DG(Z5):DC(Y14) DA(Z6):DT(Y13) DA(Z7):DT(Y12) DA(Z8):DT(Y11) DT(Z9):DA(Y10) DA(Z10):DT(Y9) DT(Z11):DA(Y8) DT(Z12):DA(Y7) DG(Z13):DC(Y6) DC(Z14):DG(Y5) DA(Z15):DT(Y4) DT(Z16):DA(Y3) DA(Z17):DT(Y2) DG(Z18):DC(Y1) chainB ( 28) HIS30 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN31 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER32 0 0 0 5 4 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) GLU33 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER35 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG36 0 0 0 13 9 12 3 0 0 0 0 0 0 0 0 0 0 0 ( 40) VAL42 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aeklgseikkirvlrgltqkqlsenicHQSEvSRiesgaVypsmdilqgiaaklqipiihfyevliysdierkkqfkdqvimlckqkrykeiynkvwnelkkeeyhpefqqflqwqyyvaayvlkkvdyeycilelkkllnqqltgidvyqnlyienaianiyaengylkkgidlfeqilkqlealhdneefdvkvrynhakalyldsryeeslyqvnkaieiscrinsmaligqlyyqrgeclrkleyeeaeiedaykkasfffdilemhaykealvnk >3u44_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF ADDAB-DNA COMPLEX organism=BACILLUS SUBTILIS DNA sequence DT(X1):DA(X43) DC(X2):DG(X42) DT(X3):DA(X41) DA(X4):DT(X40) DA(X5):DT(X39) DT(X6):DA(X38) DG(X7):DC(X37) DC(X8):DG(X36) DG(X9):DC(X35) DA(X10):DT(X34) DG(X11):DC(X33) DC(X12):DG(X32) DA(X13):DT(X31) DC(X14):DG(X30) DT(X15):DA(X29) DG(X16):DC(X28) chainA (756) MET816 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (1040) ARG1059 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 (1055) ARG1074 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 (1057) ASP1076 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence twtddqwnaivstgqdilvaaaagsgktavlvermirkitaeenpidvdrllvvtftnasaaemkhriaealekelvqrpgslhirrqlsllnrasistlhsfclqvlkkyyylidldpgfriadqtegeligdevldelfedeyakgekaffelvdryttdrhdldlqflvkqvyeysrshpnpeawlesfvhlydvseksaieelpfyqyvkediamvlngakekllraleltdnflddlaqideliqhqddfselykrvpavsdpalldeatdlrngakklleklktdyftrspeqhlkslaemkpvietlvqlvisygkrfeaakqeksiidfsdlehyclailtaendrepseaarfyqeqfhevlvdeyqdtnlvqesilqlvtsgpeetgnlfmvgdvkqsiyrfrlaepllflskykrftesgegtgrkidlnknfrsradildstnflfkqlmggkigevdydeqaelklgaaypdndetetelllidletvqfeakaiakeirklisspfkvykkthrniqyrdivillrsmpwapqimeelraqgipvyanltsgyfeavevavalsvlkvidnpyqdiplasvlrspivgadenelslirlenkkapyyeamkdylaagdrsdelyqklntfyghlqkwrafsknhsvseliwevyrdtkymdyvggmpggkqrqanlrvlydrarqyestafrglfrflrfiermqergdqedvvrlmtihsskglefpvvfvaglgrnfnmMdlnksylldkelgfgtkyihpqlrisyptlpliamkkkmrrellseelrvlyvaltrakeklfligsckdhqkqlakwqasasqtdwllpefdryqartyldfigpalarhrhadisghparfavqmihsydserleairrgepvfafdekareqlswtyphqevtqirtkqsvsdeysgryrrpafmmkkgltaaekgtamhtvmqhiplshvpsieeaeqtvhrlyekellteeqkdaidieeivqffhteiggqligakwkdreipfslalpakeiypdaheadepllvqgiidclyetedglyllayksdrieggfegaapilkkryetqiqlytkaveqiaktkvkgcalyffdgghiltl/gaeflvgrsgsgktkliinsiqdelrrapfgkpiiflvpdqmtflmeyelaktpdmggmiraqvfsfsrlawrvlqhtggmsrpfltstgvqmllrklieehkqefkvyqkasdksgftaqvermltefkryclepedirrmaesgtaseyrgervlseklhdlsilyqqmeksladqylhsedyltllaehiplaedikgahiyvdgfyqftpqefrvleqlmvhaehitfsltadkpsyerephelelfrmtgktyyrlhqkakelnlditykelsgterhtktpelahleaqyearpaipyaekqealtvmqaanrraelegiareihalvrekgyrykdvailarqpedykdmvkevfadyeipyfidgkasmlnhpliefirssldvlkgnwryeavfrcvktellfplnepkakvreqvdqlenyciaygikgdrwtktdqeiemenmlndtrdwivpplfqlqkrmkkaktvqekaealyryleetdvplkldqerqraeddgriieaqqhqqawdaviqlleefvemmgddeisldlfqqmieagaesltfslippaldqvfvgnmdlsrmygtsctfvlgandgvlparpdengvlsdddrewlktigvelssggrerlldehfliymafsspsdrlyvsypiadaegktllpsmivkrleelfphhkerlltnepeqvsdeeqlmyvvnksvaqsftasqlrlwtreydisdvwwstynvlmseqdrlqskklfsslffrnevkqlersvsrqlygeriqgsvsrmetfnacpfshfashglhlkerqffkleapdigqlfhsslklisdrlrdekldwrdltkeqcelfsydaverlapklqkeillssnrhyyvkeklqkivtrvsgilsehakasgfvpiglelgfggkgplppltfqlkngctmelvgridrvdkaesskglllrivaykssdkgldlaevyyglalqmltyldlsithsadwlgmratpagvlyfhihdpmiqsnlplgldeieqeifkkfkmkglllgdqevvrlmdttlqegRsniinaglkkdgslRsDsaavgekefdlltkhvrrtfqeageqitdgrvsiepykmknktpctycafksvcqfdesleeneyrplkaekdktilewikkea >3u44_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF ADDAB-DNA COMPLEX organism=BACILLUS SUBTILIS DNA sequence DT(X1):DA(X43) DC(X2):DG(X42) DT(X3):DA(X41) DA(X4):DT(X40) DA(X5):DT(X39) DT(X6):DA(X38) DG(X7):DC(X37) DC(X8):DG(X36) DG(X9):DC(X35) DA(X10):DT(X34) DG(X11):DC(X33) DC(X12):DG(X32) DA(X13):DT(X31) DC(X14):DG(X30) DT(X15):DA(X29) DG(X16):DC(X28) chainB (1040) ARG1059 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 (1055) ARG1074 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 (1057) ASP1076 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence gaeflvgrsgsgktkliinsiqdelrrapfgkpiiflvpdqmtflmeyelaktpdmggmiraqvfsfsrlawrvlqhtggmsrpfltstgvqmllrklieehkqefkvyqkasdksgftaqvermltefkryclepedirrmaesgtaseyrgervlseklhdlsilyqqmeksladqylhsedyltllaehiplaedikgahiyvdgfyqftpqefrvleqlmvhaehitfsltadkpsyerephelelfrmtgktyyrlhqkakelnlditykelsgterhtktpelahleaqyearpaipyaekqealtvmqaanrraelegiareihalvrekgyrykdvailarqpedykdmvkevfadyeipyfidgkasmlnhpliefirssldvlkgnwryeavfrcvktellfplnepkakvreqvdqlenyciaygikgdrwtktdqeiemenmlndtrdwivpplfqlqkrmkkaktvqekaealyryleetdvplkldqerqraeddgriieaqqhqqawdaviqlleefvemmgddeisldlfqqmieagaesltfslippaldqvfvgnmdlsrmygtsctfvlgandgvlparpdengvlsdddrewlktigvelssggrerlldehfliymafsspsdrlyvsypiadaegktllpsmivkrleelfphhkerlltnepeqvsdeeqlmyvvnksvaqsftasqlrlwtreydisdvwwstynvlmseqdrlqskklfsslffrnevkqlersvsrqlygeriqgsvsrmetfnacpfshfashglhlkerqffkleapdigqlfhsslklisdrlrdekldwrdltkeqcelfsydaverlapklqkeillssnrhyyvkeklqkivtrvsgilsehakasgfvpiglelgfggkgplppltfqlkngctmelvgridrvdkaesskglllrivaykssdkgldlaevyyglalqmltyldlsithsadwlgmratpagvlyfhihdpmiqsnlplgldeieqeifkkfkmkglllgdqevvrlmdttlqegRsniinaglkkdgslRsDsaavgekefdlltkhvrrtfqeageqitdgrvsiepykmknktpctycafksvcqfdesleeneyrplkaekdktilewikkea >3u4q_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=STRUCTURE OF ADDAB-DNA COMPLEX AT 2.8 ANGSTROMS organism=BACILLUS SUBTILIS DNA sequence DT(X3):DA(X41) DA(X4):DT(X40) DA(X5):DT(X39) DT(X6):DA(X38) DG(X7):DC(X37) DC(X8):DG(X36) DG(X9):DC(X35) DA(X10):DT(X34) DG(X11):DC(X33) DC(X12):DG(X32) chainA chainB (1055) ARG1074 0 0 0 0 0 1 0 0 0 0 (1057) ASP1076 0 0 0 0 1 0 0 0 0 0 prot.sequence twtddqwnaivstgqdilvaaaagsgktavlvermirkitaeenpidvdrllvvtftnasaaemkhriaealekelvqrpgslhirrqlsllnrasistlhsfclqvlkkyyylidldpgfriadqtegeligdevldelfedeyakgekaffelvdryttdrhdldlqflvkqvyeysrshpnpeawlesfvhlydvseksaieelpfyqyvkediamvlngakekllraleltdnflddlaqideliqhqddfselykrvpavsdpalldeatdlrngakklleklktdyftrspeqhlkslaemkpvietlvqlvisygkrfeaakqeksiidfsdlehyclailtaendrepseaarfyqeqfhevlvdeyqdtnlvqesilqlvtsgpeetgnlfmvgdvkqsiyrfrlaepllflskykrftesgegtgrkidlnknfrsradildstnflfkqlmggkigevdydeqaelklgaaypdndetetelllidletvqfeakaiakeirklisspfkvykkthrniqyrdivillrsmpwapqimeelraqgipvyanltsgyfeavevavalsvlkvidnpyqdiplasvlrspivgadenelslirlenkkapyyeamkdylaagdrsdelyqklntfyghlqkwrafsknhsvseliwevyrdtkymdyvggmpggkqrqanlrvlydrarqyestafrglfrflrfiermqergdqedvvrlmtihsskglefpvvfvaglgrnfnmmdlnksylldkelgfgtkyihpqlrisyptlpliamkkkmrrellseelrvlyvaltrakeklfligsckdhqkqlakwqasasqtdwllpefdryqartyldfigpalarhrhadisghparfavqmihsydserleairrgepvfafdekareqlswtyphqevtqirtkqsvsdeysgryrrpafmmkkgltaaekgtamhtvmqhiplshvpsieeaeqtvhrlyekellteeqkdaidieeivqffhteiggqligakwkdreipfslalpakeiypdaheadepllvqgiidclyetedglyllayksdrieggfegaapilkkryetqiqlytkaveqiaktkvkgcalyffdgghiltl/gaeflvgrsgsgktkliinsiqdelrrapfgkpiiflvpdqmtflmeyelaktpdmggmiraqvfsfsrlawrvlqhtggmsrpfltstgvqmllrklieehkqefkvyqkasdksgftaqvermltefkryclepedirrmaesgtaseyrgervlseklhdlsilyqqmeksladqylhsedyltllaehiplaedikgahiyvdgfyqftpqefrvleqlmvhaehitfsltadkpsyerephelelfrmtgktyyrlhqkakelnlditykelsgterhtktpelahleaqyearpaipyaekqealtvmqaanrraelegiareihalvrekgyrykdvailarqpedykdmvkevfadyeipyfidgkasmlnhpliefirssldvlkgnwryeavfrcvktellfplnepkakvreqvdqlenyciaygikgdrwtktdqeiemenmlndtrdwivpplfqlqkrmkkaktvqekaealyryleetdvplkldqerqraeddgriieaqqhqqawdaviqlleefvemmgddeisldlfqqmieagaesltfslippaldqvfvgnmdlsrmygtsctfvlgandgvlparpdengvlsdddrewlktigvelssggrerlldehfliymafsspsdrlyvsypiadaegktllpsmivkrleelfphhkerlltnepeqvsdeeqlmyvvnksvaqsftasqlrlwtreydisdvwwstynvlmseqdrlqskklfsslffrnevkqlersvsrqlygeriqgsvsrmetfnacpfshfashglhlkerqffkleapdigqlfhsslklisdrlrdekldwrdltkeqcelfsydaverlapklqkeillssnrhyyvkeklqkivtrvsgilsehakasgfvpiglelgfggkgplppltfqlkngctmelvgridrvdkaesskglllrivaykssdkgldlaevyyglalqmltyldlsithsadwlgmratpagvlyfhihdpmiqsnlplgldeieqeifkkfkmkglllgdqevvrlmdttlqegrsniinaglkkdgslRsDsaavgekefdlltkhvrrtfqeageqitdgrvsiepykcafksvcqfdesleeneyrplkaekdktilewikkea >3u4q_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF ADDAB-DNA COMPLEX AT 2.8 ANGSTROMS organism=BACILLUS SUBTILIS DNA sequence DT(X3):DA(X41) DA(X4):DT(X40) DA(X5):DT(X39) DT(X6):DA(X38) DG(X7):DC(X37) DC(X8):DG(X36) DG(X9):DC(X35) DA(X10):DT(X34) DG(X11):DC(X33) DC(X12):DG(X32) chainB (1055) ARG1074 0 0 0 0 0 1 0 0 0 0 (1057) ASP1076 0 0 0 0 1 0 0 0 0 0 prot.sequence gaeflvgrsgsgktkliinsiqdelrrapfgkpiiflvpdqmtflmeyelaktpdmggmiraqvfsfsrlawrvlqhtggmsrpfltstgvqmllrklieehkqefkvyqkasdksgftaqvermltefkryclepedirrmaesgtaseyrgervlseklhdlsilyqqmeksladqylhsedyltllaehiplaedikgahiyvdgfyqftpqefrvleqlmvhaehitfsltadkpsyerephelelfrmtgktyyrlhqkakelnlditykelsgterhtktpelahleaqyearpaipyaekqealtvmqaanrraelegiareihalvrekgyrykdvailarqpedykdmvkevfadyeipyfidgkasmlnhpliefirssldvlkgnwryeavfrcvktellfplnepkakvreqvdqlenyciaygikgdrwtktdqeiemenmlndtrdwivpplfqlqkrmkkaktvqekaealyryleetdvplkldqerqraeddgriieaqqhqqawdaviqlleefvemmgddeisldlfqqmieagaesltfslippaldqvfvgnmdlsrmygtsctfvlgandgvlparpdengvlsdddrewlktigvelssggrerlldehfliymafsspsdrlyvsypiadaegktllpsmivkrleelfphhkerlltnepeqvsdeeqlmyvvnksvaqsftasqlrlwtreydisdvwwstynvlmseqdrlqskklfsslffrnevkqlersvsrqlygeriqgsvsrmetfnacpfshfashglhlkerqffkleapdigqlfhsslklisdrlrdekldwrdltkeqcelfsydaverlapklqkeillssnrhyyvkeklqkivtrvsgilsehakasgfvpiglelgfggkgplppltfqlkngctmelvgridrvdkaesskglllrivaykssdkgldlaevyyglalqmltyldlsithsadwlgmratpagvlyfhihdpmiqsnlplgldeieqeifkkfkmkglllgdqevvrlmdttlqegrsniinaglkkdgslRsDsaavgekefdlltkhvrrtfqeageqitdgrvsiepykcafksvcqfdesleeneyrplkaekdktilewikkea >3u5z_ABCDE:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER BOUND TO THE T4 CLAMP, PRIMER-TEMPLATE DNA, AND ATP ANALOG organism=ENTEROBACTERIA PHAGE T4 DNA sequence DT(I11):DA(J20) DA(I12):DT(J19) DT(I13):DA(J18) DG(I14):DC(J17) DT(I15):DA(J16) DA(I16):DT(J15) DC(I17):DG(J14) DT(I18):DA(J13) DC(I19):DG(J12) DG(I20):DC(J11) DT(I21):DA(J10) DA(I22):DT(J9) DG(I23):DC(J8) DT(I24):DA(J7) DG(I25):DC(J6) DT(I26):DA(J5) DC(I27):DG(J4) DT(I28):DA(J3) DG(I29):DC(J2) DC(I30):DG(J1) chainB chainC chainD chainE (286) ASN300 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 62) PHE63 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence slfkddiqlnehqvawyskdwtavqsaadsfkekaeneffeiigainnktkcsiaqkdyskFmvenalsqfpecmpavyamnligsglsdeahfnylmaavprgkrygkwaklvedstevliikllakryqvntndainyksiltkngklplvlkelkglvtddflkevtknvkeqkqlkklalew/smitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvaKalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/smitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvaKalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/smitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvaKalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/itvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvlaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaaNtelhlaylfiqlacemqwk >3u5z_E:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER BOUND TO THE T4 CLAMP, PRIMER-TEMPLATE DNA, AND ATP ANALOG organism=ENTEROBACTERIA PHAGE T4 DNA sequence DT(I11):DA(J20) DA(I12):DT(J19) DT(I13):DA(J18) DG(I14):DC(J17) DT(I15):DA(J16) DA(I16):DT(J15) DC(I17):DG(J14) DT(I18):DA(J13) DC(I19):DG(J12) DG(I20):DC(J11) DT(I21):DA(J10) DA(I22):DT(J9) DG(I23):DC(J8) DT(I24):DA(J7) DG(I25):DC(J6) DT(I26):DA(J5) DC(I27):DG(J4) DT(I28):DA(J3) DG(I29):DC(J2) DC(I30):DG(J1) chainE (286) ASN300 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence itvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvlaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaaNtelhlaylfiqlacemqwk >3u5z_KLMNO:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER BOUND TO THE T4 CLAMP, PRIMER-TEMPLATE DNA, AND ATP ANALOG organism=ENTEROBACTERIA PHAGE T4 DNA sequence DT(S11):DA(T20) DA(S12):DT(T19) DT(S13):DA(T18) DG(S14):DC(T17) DT(S15):DA(T16) DA(S16):DT(T15) DC(S17):DG(T14) DT(S18):DA(T13) DC(S19):DG(T12) DG(S20):DC(T11) DT(S21):DA(T10) DA(S22):DT(T9) DG(S23):DC(T8) DT(S24):DA(T7) DG(S25):DC(T6) DT(S26):DA(T5) DC(S27):DG(T4) DT(S28):DA(T3) DG(S29):DC(T2) DC(S30):DG(T1) chainL chainM chainN chainO (286) ASN300 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) THR301 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 62) PHE63 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence slfkddiqlnehqvawyskdwtavqsaadsfkekaeneffeiigainnktkcsiaqkdyskFmvenalsqfpecmpavyamnligsglsdeahfnylmaavprgkrygkwaklvedstevliikllakryqvntndainyksiltkngklplvlkelkglvtddflkevtknvkeqkqlkklalew/smitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvaKalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/smitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvaKalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/smitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvaKalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/itvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvlaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaaNTelhlaylfiqlacemqwk >3u60_ABCDE:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER BOUND TO OPEN CLAMP, DNA AND ATP ANALOG organism=ENTEROBACTERIA PHAGE T4 DNA sequence DT(I11):DA(J20) DA(I12):DT(J19) DT(I13):DA(J18) DG(I14):DC(J17) DT(I15):DA(J16) DA(I16):DT(J15) DC(I17):DG(J14) DT(I18):DA(J13) DC(I19):DG(J12) DG(I20):DC(J11) DT(I21):DA(J10) DA(I22):DT(J9) DG(I23):DC(J8) DT(I24):DA(J7) DG(I25):DC(J6) DT(I26):DA(J5) DC(I27):DG(J4) DT(I28):DA(J3) DG(I29):DC(J2) DC(I30):DG(J1) chainB chainC chainD chainE (285) ALA299 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 62) PHE63 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence slfkddiqlnehqvawyskdwtavqsaadsfkekaeneffeiigainnktkcsiaqkdyskFmvenalsqfpecmpavyamnligsglsdeahfnylmaavprgkrygkwaklvedstevliikllakryqvntndainyksiltkngklplvlkelkglvtddflkevtknvkeqkqlkklalew/mitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakAlchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/smitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvaKalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/mitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakAlchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/itvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvlaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaAntelhlaylfiqlacemqwk >3u6c_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SET 1 APGO organism=Geobacillus stearothermophilus DNA sequence DG(B3):DC(C15) DT(B4):DA(C14) DA(B5):DT(C13) DG(B6):DC(C12) DA(B7):DA(C10) DT(B8):DG(C9) DC(B9):DA(C7) DC(B10):DC(C6) chainA ( 75) ARG76 0 0 0 0 1 12 0 0 (111) ARG112 0 0 0 0 0 0 0 3 (113) PHE114 0 0 0 0 0 7 22 10 (242) ARG264 0 0 0 0 1 7 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRmegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3u6d_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SET 1 GPGO organism=Geobacillus stearothermophilus DNA sequence DC(C6):DC(B10) DG(C7):DC(B9) DG(C9):DT(B8) DA(C10):DA(B7) DC(C12):DG(B6) DT(C13):DA(B5) DA(C14):DT(B4) DC(C15):DG(B3) chainA ( 75) ARG76 0 0 14 1 0 0 0 0 (111) ARG112 4 4 0 0 0 0 0 0 (113) PHE114 15 18 11 0 0 0 0 0 (242) ARG264 0 0 6 1 0 0 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRmegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3u6e_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SET 1 TPGO organism=Geobacillus stearothermophilus DNA sequence DG(B6):DA(C14) DA(B7):DT(C13) DT(B8):DC(C12) DC(B9):DA(C10) DC(B10):DG(C9) DA(B11):DT(C7) DG(B12):DC(C6) chainA ( 75) ARG76 0 0 0 1 11 0 0 (111) ARG112 0 0 0 0 4 10 4 (113) PHE114 0 0 0 21 20 0 0 (242) ARG264 0 0 0 3 4 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRmegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3u6l_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SET 2 CPGO organism=Geobacillus stearothermophilus DNA sequence DC(C6):DG(B13) DC(C7):DG(B12) DC(C8):DG(B11) DG(C10):DC(B10) DT(C11):DC(B9) DT(C13):DA(B8) DA(C14):DG(B7) DC(C15):DA(B6) chainA ( 75) ARG76 0 0 0 11 1 0 0 0 (111) ARG112 0 6 14 3 0 0 0 0 (113) PHE114 0 0 0 30 11 0 0 0 (242) ARG264 0 0 0 4 3 0 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniiRhprdseafaarmigqtvrglerrgkflkflldrdalishlRmegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3u6m_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL EFFECTS OF SEQUENCE CONTEXT ON LESION RECOGNITION BY MUTM organism=Geobacillus stearothermophilus DNA sequence DT(B5):DA(C13) DA(B6):DT(C12) DG(B7):DT(C10) DA(B8):DG(C9) DC(B9):DT(C7) chainA ( 75) ARG76 0 0 2 11 0 (111) ARG112 0 0 0 0 7 (113) PHE114 0 0 0 10 19 (156) ARG157 1 0 0 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniiRhprdseafaarmigqtvrglerrgkflkflldrdalishlRmegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkRsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagrgthycprcqr >3u6o_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SET 1 APG organism=Geobacillus stearothermophilus DNA sequence DG(B3):DC(C15) DT(B4):DA(C14) DA(B5):DT(C13) DG(B6):DC(C12) DA(B7):DA(C10) DT(B8):DG(C9) DC(B9):DG(C8) DC(B10):DA(C7) DT(B11):DC(C6) DG(B12):DT(C5) chainA ( 75) ARG76 0 0 0 0 3 11 0 0 0 0 ( 76) MET77 0 0 0 0 0 0 4 0 0 0 (111) ARG112 0 0 0 0 0 0 3 2 7 4 (113) PHE114 0 0 0 0 0 7 35 8 0 0 (242) ARG264 0 0 0 0 0 7 5 0 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3u6p_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SET 1 GPG organism=Geobacillus stearothermophilus DNA sequence DG(B3):DC(C15) DT(B4):DA(C14) DA(B5):DT(C13) DG(B6):DC(C12) DA(B7):DA(C10) DT(B8):DG(C9) DC(B9):DG(C8) DC(B10):DG(C7) DC(B11):DC(C6) chainA ( 75) ARG76 0 0 0 0 1 12 0 0 0 ( 76) MET77 0 0 0 0 0 3 3 0 0 (111) ARG112 0 0 0 0 0 0 2 6 7 (113) PHE114 0 0 0 0 0 7 29 10 0 (242) ARG264 0 0 0 0 1 7 3 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3u6q_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SET 2 APGO organism=Geobacillus stearothermophilus DNA sequence DG(B7):DA(C13) DA(B8):DT(C12) DC(B9):DT(C10) DC(B10):DG(C9) DT(B11):DA(C7) DG(B12):DC(C6) chainA ( 75) ARG76 0 0 2 11 0 0 (111) ARG112 0 0 0 3 8 4 (113) PHE114 0 0 18 27 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniiRhprdseafaarmigqtvrglerrgkflkflldrdalishlRmegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagrgthycprcqr >3u6s_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM SET 1 TPG organism=Geobacillus stearothermophilus DNA sequence DG(C4):DC(B14) DT(C5):DA(B13) DC(C6):DG(B12) DT(C7):DA(B11) DG(C8):DC(B10) DG(C9):DC(B9) DA(C10):DT(B8) DC(C12):DA(B7) DT(C13):DG(B6) DA(C14):DA(B5) DC(C15):DT(B4) chainA ( 75) ARG76 0 0 0 0 0 11 1 0 0 0 0 (111) ARG112 0 0 4 9 6 0 0 0 0 0 0 (113) PHE114 0 0 0 0 19 30 0 0 0 0 0 (242) ARG264 0 0 0 0 3 7 2 0 0 0 0 prot.sequence pqlpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRmEgryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >3ubt_ABY: title=CRYSTAL STRUCTURE OF C71S MUTANT OF DNA CYTOSINE-5 METHYLTRANSFERASE M.HAEIII BOUND TO DNA organism=HAEMOPHILUS AEGYPTIUS DNA sequence DT(F7):DA(E9) DG(F8):DC(E8) DG(F9):DC(E7) DC(F10):DG(E6) DC(F11):DG(E5) DA(F12):DT(E4) DT(C7):DA(D9) DG(C8):DC(D8) DG(C9):DC(D7) DC(C10):DG(D6) DC(C11):DG(D5) DT(H7):DA(G9) DG(H8):DC(G8) DG(H9):DC(G7) DC(H10):DG(G6) DC(H11):DG(G5) chainY (219) SER219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 (220) THR220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (221) ILE221 0 0 0 0 0 0 0 0 0 0 0 0 0 15 29 0 (224) SER224 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (225) ARG225 0 0 0 0 0 0 0 0 0 0 0 13 15 3 0 0 (227) ARG227 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 (239) GLN239 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 (243) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (244) GLN244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 chainA (219) SER219 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 (220) THR220 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (221) ILE221 0 0 14 29 0 0 0 0 0 0 0 0 0 0 0 0 (224) SER224 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ARG225 8 17 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) ARG227 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) GLN239 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 (243) ARG243 0 0 0 0 12 24 0 0 0 0 0 0 0 0 0 0 (244) GLN244 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 chainB (219) SER219 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 (220) THR220 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (221) ILE221 0 0 0 0 0 0 0 0 17 29 0 0 0 0 0 0 (224) SER224 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (225) ARG225 0 0 0 0 0 0 5 17 9 0 0 0 0 0 0 0 (227) ARG227 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (239) GLN239 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 (243) ARG243 0 0 0 0 0 0 0 0 0 0 12 17 0 0 0 0 (244) GLN244 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 prot.sequence mnlislfsgaggldlgfqkagfriicaneydksiwktyesnhsaklikgdiskissdefpkcdgiiggppsqswseggslrgiddprgklfyeyirilkqkkpifflaenvkgmmaqrhnkavqefiqefdnagydvhiillnandygvaqdrkrvfyigfrkelninylppiphlikptfkdviwdlkdnpipaldknktngnkciypnheyfigsySTIfmSRnRvrqwnepaftvQasgRQcqlhpqapvmlkvsknlnkfvegkehlyrrltvrecarvqgfpddfifhyeslndgykmignavpvnlayeiaktiksaleick/mnlislfsgaggldlgfqkagfriicaneydksiwktyesnhsaklikgdiskissdefpkcdgiiggppsqswseggslrgiddprgklfyeyirilkqkkpifflaenvkgmmaqrhnkavqefiqefdnagydvhiillnandygvaqdrkrvfyigfrkelninylppiphlikptfkdviwdlkdnpipaldknktngnkciypnheyfigsySTIfmSRnRvrqwnepaftvQasgRQcqlhpqapvmlkvsknlnkfvegkehlyrrltvrecarvqgfpddfifhyeslndgykmignavpvnlayeiaktiksaleick/mnlislfsgaggldlgfqkagfriicaneydksiwktyesnhsaklikgdiskissdefpkcdgiiggppsqswseggslrgiddprgklfyeyirilkqkkpifflaenvkgmmaqrhnkavqefiqefdnagydvhiillnandygvaqdrkrvfyigfrkelninylppiphlikptfkdviwdlkdnpipaldknktngnkciypnheyfigsySTIfmSRnRvrqwnepaftvQasgRQcqlhpqapvmlkvsknlnkfvegkehlyrrltvrecarvqgfpddfifhyeslndgykmignavpvnlayeiaktiksaleick >3ubt_Y:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF C71S MUTANT OF DNA CYTOSINE-5 METHYLTRANSFERASE M.HAEIII BOUND TO DNA organism=? DNA sequence DG(G5):DC(H11) DG(G6):DC(H10) DC(G7):DG(H9) DC(G8):DG(H8) DA(G9):DT(H7) DG(D5):DC(C11) DG(D6):DC(C10) DC(D7):DG(C9) DC(D8):DG(C8) DA(D9):DT(C7) DT(E4):DA(F12) DG(E5):DC(F11) DG(E6):DC(F10) DC(E7):DG(F9) DC(E8):DG(F8) DA(E9):DT(F7) chainY (219) SER219 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) THR220 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ILE221 0 29 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) SER224 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ARG225 0 0 3 15 13 0 0 0 0 0 0 0 0 0 0 0 (227) ARG227 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) GLN239 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ARG243 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) GLN244 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnlislfsgaggldlgfqkagfriicaneydksiwktyesnhsaklikgdiskissdefpkcdgiiggppsqswseggslrgiddprgklfyeyirilkqkkpifflaenvkgmmaqrhnkavqefiqefdnagydvhiillnandygvaqdrkrvfyigfrkelninylppiphlikptfkdviwdlkdnpipaldknktngnkciypnheyfigsySTIfmSRnRvrqwnepaftvQasgRQcqlhpqapvmlkvsknlnkfvegkehlyrrltvrecarvqgfpddfifhyeslndgykmignavpvnlayeiaktiksaleick >3uby_A:FMT_C-terminal_domain-like; title=CRYSTAL STRUCTURE OF HUMAN ALKLYADENINE DNA GLYCOSYLASE IN A LOWER AND HIGHER-AFFINITY COMPLEX WITH DNA organism=Homo sapiens DNA sequence DA(C2):DT(D8) DC(C3):DG(D6) DA(C4):DT(D5) DT(C5):DA(D4) DG(C6):DC(D3) DT(C8):DA(D2) DT(C9):DG(D1) chainA ( 83) TYR162 0 0 0 0 18 59 0 ( 85) MET164 0 0 0 0 0 2 0 ( 86) TYR165 0 0 0 0 0 5 1 prot.sequence gphmtrlgleffdqpavplaraflgqvlvrrlpngtelrgriveteaylgpedeaahsrggrqtprnrgmfmkpgtlyvyiiYgMYfcmnissqgdgacvllraleplegletmrqlrstllkdrelcsgpsklcqalainksfdqrdlaqdeavwlergplepsepavvaaarvgvagewarkplrfyvrgspwvsvvdrvae >3ufd_AB:lambda_repressor-like_DNA-binding_domains; title=C.ESP1396I BOUND TO ITS HIGHEST AFFINITY OPERATOR SITE OM organism=Enterobacter sp. RFL1396 DNA sequence DT(D2):DA(C19) DG(D3):DC(C18) DT(D4):DA(C17) DC(D5):DG(C16) DG(D6):DC(C15) DA(D7):DT(C14) DC(D8):DG(C13) DT(D9):DA(C12) DA(D10):DT(C11) DT(D11):DA(C10) DA(D12):DT(C9) DG(D13):DC(C8) DT(D14):DA(C7) DC(D15):DG(C6) DT(D16):DA(C5) DA(D17):DT(C4) DC(D18):DG(C3) DA(D19):DT(C2) chainA ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 8 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 1 7 4 6 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 3 7 1 0 0 0 0 0 chainB ( 33) ASP34 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 8 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 7 5 5 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgiernsRnltikslelimkglevsdvvffemlikeilk/esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgiernsRnltikslelimkglevsdvvffemlikeilkh >3ufd_B:lambda_repressor-like_DNA-binding_domains; title=C.ESP1396I BOUND TO ITS HIGHEST AFFINITY OPERATOR SITE OM organism=Enterobacter sp. RFL1396 DNA sequence DT(C2):DA(D19) DG(C3):DC(D18) DT(C4):DA(D17) DA(C5):DT(D16) DG(C6):DC(D15) DA(C7):DT(D14) DC(C8):DG(D13) DT(C9):DA(D12) DA(C10):DT(D11) DT(C11):DA(D10) DA(C12):DT(D9) DG(C13):DC(D8) DT(C14):DA(D7) DC(C15):DG(D6) DG(C16):DC(D5) DA(C17):DT(D4) DC(C18):DG(D3) DA(C19):DT(D2) chainB ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 8 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 2 5 5 7 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgiernsRnltikslelimkglevsdvvffemlikeilkh >3ufj_AB:Uracil-DNA_glycosylase-like; title=HUMAN THYMINE DNA GLYCOSYLASE BOUND TO SUBSTRATE ANALOG 2'-FLUORO-2'- DEOXYURIDINE organism=Homo sapiens DNA sequence DA(c2):DA(d45) DG(c3):DG(d44) DC(c4):DG(d43) DT(c5):DT(d42) DC(c6):DG(d41) DT(c7):DA(d40) DG(c8):DC(d39) DT(c9):DG(d38) DA(c10):DA(d37) DC(c11):DG(d36) DG(c12):DT(d35) DT(c13):DG(d34) DG(c14):DC(d33) DA(c15):DA(d32) DG(c16):DT(d31) DC(c17):DG(d30) DA(c18):DT(d29) DG(c19):DC(d28) DT(c20):DT(d27) DG(c21):DC(d26) DA(c23):DG(d25) DC(c24):DA(d24) DC(c25):DC(d23) DA(c26):DT(d22) DC(c27):DG(d21) DT(c28):DT(d20) DG(c29):DC(d19) DC(c30):DG(d18) DT(c31):DA(d17) DC(c32):DG(d16) DA(c33):DA(d15) DG(c34):DC(d14) DT(c35):DA(d13) DA(c36):DT(d12) DC(c37):DG(d11) DA(c38):DA(d10) DG(c39):DC(d9) DA(c40):DT(d8) DG(c41):DC(d7) DC(c42):DG(d6) DT(c43):DT(d5) DG(c44):DC(d4) DT(c45):DA(d3) chainA ( 81) SER200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (114) CYS233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (155) ALA274 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (156) ARG275 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 0 0 0 0 0 0 0 (158) ALA277 0 0 0 0 0 3 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) PRO280 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (111) CYS233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (152) ALA274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 5 0 0 0 0 0 0 0 0 0 0 0 (155) ALA277 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 6 2 0 0 (158) PRO280 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ltktlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSkdlsskefreggrilvqklqkyqpriavfngkCiyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARcAqfPraqdkvhyyiklkdlrdqlkgier/tlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgskdlsskefreggrilvqklqkyqpriavfngkCiyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARcAqfPraqdkvhyyiklkdlrdqlkgier >3ufj_B:Uracil-DNA_glycosylase-like; title=HUMAN THYMINE DNA GLYCOSYLASE BOUND TO SUBSTRATE ANALOG 2'-FLUORO-2'- DEOXYURIDINE organism=Homo sapiens DNA sequence DA(c2):DA(d45) DG(c3):DG(d44) DC(c4):DG(d43) DT(c5):DT(d42) DC(c6):DG(d41) DT(c7):DA(d40) DG(c8):DC(d39) DT(c9):DG(d38) DA(c10):DA(d37) DC(c11):DG(d36) DG(c12):DT(d35) DT(c13):DG(d34) DG(c14):DC(d33) DA(c15):DA(d32) DG(c16):DT(d31) DC(c17):DG(d30) DA(c18):DT(d29) DG(c19):DC(d28) DT(c20):DT(d27) DG(c21):DC(d26) DA(c23):DG(d25) DC(c24):DA(d24) DC(c25):DC(d23) DA(c26):DT(d22) DC(c27):DG(d21) DT(c28):DT(d20) DG(c29):DC(d19) DC(c30):DG(d18) DT(c31):DA(d17) DC(c32):DG(d16) DA(c33):DA(d15) DG(c34):DC(d14) DT(c35):DA(d13) DA(c36):DT(d12) DC(c37):DG(d11) DA(c38):DA(d10) DG(c39):DC(d9) DA(c40):DT(d8) DG(c41):DC(d7) DC(c42):DG(d6) DT(c43):DT(d5) DG(c44):DC(d4) DT(c45):DA(d3) chainB (111) CYS233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (152) ALA274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 5 0 0 0 0 0 0 0 0 0 0 0 (155) ALA277 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 6 2 0 0 (158) PRO280 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgskdlsskefreggrilvqklqkyqpriavfngkCiyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARcAqfPraqdkvhyyiklkdlrdqlkgier >3ugm_A:Thiolase-like; title=STRUCTURE OF TAL EFFECTOR PTHXO1 BOUND TO ITS DNA TARGET organism=Xanthomonas oryzae DNA sequence DT(C1):DA(B29) DT(C2):DA(B28) DT(C3):DA(B27) DT(C4):DA(B26) DG(C5):DC(B25) DG(C6):DC(B24) DT(C7):DA(B23) DG(C8):DC(B22) DG(C9):DC(B21) DT(C10):DA(B20) DG(C11):DC(B19) DT(C12):DA(B18) DA(C13):DT(B17) DC(C14):DG(B16) DA(C15):DT(B15) DG(C16):DC(B14) DT(C17):DA(B13) DA(C18):DT(B12) DG(C19):DC(B11) DG(C20):DC(B10) DG(C21):DC(B9) DG(C22):DC(B8) DG(C23):DC(B7) DA(C24):DT(B6) DG(C25):DC(B5) DA(C26):DT(B4) DT(C27):DA(B3) DG(C28):DC(B2) DC(C29):DG(B1) DA(C30):DT(B0) DT(C31):DA(B-1) DA(C32):DT(B-2) DT(C33):DA(B-3) DC(C34):DG(B-4) DT(C35):DA(B-5) DA(C36):DT(B-6) chainA ( 48) TRP232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 ( 82) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 (115) ASN301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 0 0 0 0 0 0 (149) ASP335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (183) ILE369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 (251) ASP437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 6 0 0 0 0 0 0 0 0 0 0 (352) ASP538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) ASP572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) ILE606 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (522) ILE708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (556) ASP742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (618) ASN810 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (686) ILE878 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (720) ILE912 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (752) ILE946 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpkvrelvahivalsqhpaalgtvavtyqhiitalathedivgvgkqWsgaralealltdagelrgpplqldtgqlvkiakRggvtameavhasrnaltplnltpaqvvaiasnNggkqaletvqrllpvlcqahgltpaqvvaiashDggkqaletmqrllpvlcqahglppdqvvaiasnIggkqaletvqrllpvlcqahgltpdqvvaiashgggkqaletvqrllpvlcqahgltpdqvvaiashDggkqaletvqrllpvlcqahgltpdqvvaiasngggkqaletvqrllpvlcqahgltpdqvvaiasnggkqaletvqrllpvlcqahgltpdqvvaiashDggkqaletvqrllpvlcqthgltpaqvvaiashDggkqaletvqqllpvlcqahgltpdqvvaiasnIggkqalatvqrllpvlcqahgltpdqvvaiasngggkqaletvqrllpvlcqahgltpdqvvaiasngggkqaletvqrllpvlcqahgltqvqvvaiasnIggkqaletvqrllpvlcqahgltpaqvvaiashDggkqaletvqrllpvlcqahgltpdqvvaiasngggkqaletvqrllpgltqeqvvaiasnNggkqaletvqrllpvlcqahgltpdqvvaiasngggkqaletvqrllpvlcqahgltpaqvvaiasnIggkqaletvqrllpvlcqdhgltlaqvvaiasnIggkqaletvqrllpvlcqgltqdqvvaiasnIggkqaletvqrllpvlcqdhgltpdqvvaiasniggkqaletvqrllpvlcqdhgltldqvvaiasnggkqaletvqrllpvlcqdhgltpdqvvaiasnsg >3uiq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX CONTAINING DUPNPP organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DC(P115):DG(T5) chainA (567) TYR567 0 0 0 0 0 0 0 0 0 0 0 0 1 (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 0 (800) LYS800 0 0 0 0 6 6 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfdipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniidvyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >3uk3_C:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF ZNF217 BOUND TO DNA organism=Homo sapiens DNA sequence DT(B3):DA(A20) DG(B4):DC(A19) DC(B5):DG(A18) DA(B6):DT(A17) DG(B7):DC(A16) DA(B8):DT(A15) DA(B9):DT(A14) DT(B10):DA(A13) DC(B11):DG(A12) DG(B12):DC(A11) DA(B13):DT(A10) DT(B14):DA(A9) DT(B15):DA(A8) DC(B16):DG(A7) DT(B17):DA(A6) DG(B18):DC(A5) DC(B19):DG(A4) DA(B20):DT(A3) chainC ( 11) ARG481 0 7 15 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) SER482 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR484 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR485 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN510 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR512 0 0 0 3 12 7 1 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER513 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG515 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) TYR516 0 0 0 0 0 0 4 7 1 0 0 0 0 0 0 0 0 0 prot.sequence recsycgkffRsnYylnihlrthtgekpykcefceyaaaQkTslrYhlerhh >3uk3_CD:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF ZNF217 BOUND TO DNA organism=Homo sapiens DNA sequence DT(B3):DA(A20) DG(B4):DC(A19) DC(B5):DG(A18) DA(B6):DT(A17) DG(B7):DC(A16) DA(B8):DT(A15) DA(B9):DT(A14) DT(B10):DA(A13) DC(B11):DG(A12) DG(B12):DC(A11) DA(B13):DT(A10) DT(B14):DA(A9) DT(B15):DA(A8) DC(B16):DG(A7) DT(B17):DA(A6) DG(B18):DC(A5) DC(B19):DG(A4) DA(B20):DT(A3) chainC ( 11) ARG481 0 7 15 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) SER482 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR484 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR485 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN510 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR512 0 0 0 3 12 7 1 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER513 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG515 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) TYR516 0 0 0 0 0 0 4 7 1 0 0 0 0 0 0 0 0 0 chainD ( 12) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 12 7 0 ( 13) SER482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 15) TYR484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 ( 16) TYR485 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 ( 41) GLN510 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 ( 43) THR512 0 0 0 0 0 0 0 0 0 0 0 0 7 12 3 0 0 0 ( 44) SER513 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 ( 46) ARG515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 47) TYR516 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 prot.sequence recsycgkffRSnYYlnihlrthtgekpykcefceyaaaQkTSlRYhlerhh/srecsycgkffRSnYYlnihlrthtgekpykcefceyaaaQkTSlRYhlerhhk >3ukg_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF RAP1/DNA COMPLEX organism=Saccharomyces cerevisiae DNA sequence DG(C1):DC(D29) DA(C2):DT(D28) DA(C3):DT(D27) DC(C4):DG(D26) DA(C5):DT(D25) DC(C6):DG(D24) DC(C7):DG(D23) DA(C8):DT(D22) DC(C9):DG(D21) DA(C10):DT(D20) DC(C11):DG(D19) DA(C12):DT(D18) DA(C13):DT(D17) DC(C14):DG(D16) DA(C15):DT(D15) DC(C16):DG(D14) DC(C17):DG(D13) DC(C18):DG(D12) DA(C19):DT(D11) DC(C20):DG(D10) DA(C21):DT(D9) DC(C22):DG(D8) DA(C23):DT(D7) DC(C24):DG(D6) DC(C25):DG(D5) DA(C26):DT(D4) DG(C27):DC(D3) DG(C28):DC(D2) DT(C29):DA(D1) chainA ( 1) LYS360 0 0 0 0 0 0 0 0 0 0 4 4 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) THR383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 26) HIS385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 9 6 0 0 0 0 0 0 0 0 0 0 ( 42) ASN401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER402 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 15 4 0 0 0 0 0 0 0 0 0 0 0 ( 46) HIS405 0 0 0 0 0 0 0 0 0 0 0 0 3 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TYR410 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) LYS446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 7 0 0 0 0 0 0 0 0 (161) ASN539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 (164) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 13 0 0 0 (165) ASP543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 (168) ARG546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 13 0 0 0 0 (169) LYS547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (200) THR578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (202) ARG580 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 22 0 0 0 0 0 0 (210) THR588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 (211) PRO589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 7 0 0 0 0 0 0 0 0 0 (213) ASN591 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KasftdeedefildvvrknptrrTtHtlydeishyvpnhtgNSiRHrfRvYlskrleyvyevdkfgklvrdddgnliktkvlppsiKrkfsadedytlaiavkkqfyrdlfqidpdtgrspnhvpgsepnfaayrtqsrrgpiareffkhfaeehaahteNawRDrfRKfllaygiddyisyyeaekaqnrepepmknlTnRpkrpgvpTPgNynsaakrarn >3uo7_A:Uracil-DNA_glycosylase-like; title=CRYSTAL STRUCTURE OF HUMAN THYMINE DNA GLYCOSYLASE BOUND TO SUBSTRATE 5-CARBOXYLCYTOSINE organism=Homo sapiens DNA sequence DC(D1):DG(C22) DC(D2):DG(C21) DA(D3):DT(C20) DC(D4):DG(C19) DT(D5):DA(C18) DG(D6):DC(C17) DC(D7):DG(C16) DT(D8):DA(C15) DC(D9):DG(C14) DA(D10):DT(C13) DG(D12):DC(C11) DT(D13):DA(C10) DA(D14):DT(C9) DC(D15):DG(C8) DA(D16):DT(C7) DG(D17):DC(C6) DA(D18):DT(C5) DG(D19):DC(C4) DC(D20):DG(C3) DT(D21):DA(C2) DG(D22):DC(C1) chainA ( 78) SER200 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 79) LYS201 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (152) ALA274 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (153) ARG275 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 (155) ALA277 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (156) GLN278 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 prot.sequence tlpdiltfnldiviigiapglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARcAQfpraqdkvhyyiklkdlrdqlkgie >3uo7_AB:Uracil-DNA_glycosylase-like; title=CRYSTAL STRUCTURE OF HUMAN THYMINE DNA GLYCOSYLASE BOUND TO SUBSTRATE 5-CARBOXYLCYTOSINE organism=Homo sapiens DNA sequence DC(C1):DG(D22) DA(C2):DT(D21) DG(C3):DC(D20) DC(C4):DG(D19) DT(C5):DA(D18) DC(C6):DG(D17) DT(C7):DA(D16) DG(C8):DC(D15) DT(C9):DA(D14) DA(C10):DT(D13) DC(C11):DG(D12) DT(C13):DA(D10) DG(C14):DC(D9) DA(C15):DT(D8) DG(C16):DC(D7) DC(C17):DG(D6) DA(C18):DT(D5) DG(C19):DC(D4) DT(C20):DA(D3) DG(C21):DC(D2) DG(C22):DC(D1) chainA ( 78) SER200 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 79) LYS201 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (152) ALA274 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (153) ARG275 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 (155) ALA277 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (156) GLN278 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence tlpdiltfnldiviigiapglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARcAQfpraqdkvhyyiklkdlrdqlkgie/tlpdiltfnldiviigiapglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssAQdKVhyyiklkdlrdqlkgie >3uob_AB:Uracil-DNA_glycosylase-like; title=CRYSTAL STRUCTURE OF HUMAN THYMINE DNA GLYCOSYLASE BOUND TO SUBSTRATE ANALOG 2'-DEOXY-2'-BETA-FLUORO-CYTIDINE organism=Homo sapiens DNA sequence DC(C1):DG(D22) DA(C2):DT(D21) DG(C3):DC(D20) DC(C4):DG(D19) DT(C5):DA(D18) DC(C6):DG(D17) DT(C7):DA(D16) DG(C8):DC(D15) DT(C9):DA(D14) DA(C10):DT(D13) DC(C11):DG(D12) DT(C13):DA(D10) DG(C14):DC(D9) DA(C15):DT(D8) DG(C16):DC(D7) DC(C17):DG(D6) DA(C18):DT(D5) DG(C19):DC(D4) DT(C20):DA(D3) DG(C21):DC(D2) DG(C22):DC(D1) chainA ( 78) SER200 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (152) ALA274 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (153) ARG275 0 0 0 0 0 0 0 0 0 0 12 15 0 0 0 0 0 0 0 0 0 (154) CYS276 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (155) ALA277 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (156) GLN278 0 0 0 0 0 0 0 0 1 5 4 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence tlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSkdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARCAQfpraqdkvhyyiklkdlrdqlkgie/tlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSkdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssAKVHYyiklkdlrdqlkgier >3uq0_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF THE POST-CATALYTIC PRODUCT COMPLEX OF POLYMERASE LAMBDA WITH AN RAMP AT THE PRIMER TERMINUS. organism=Homo sapiens DNA sequence DC(T1):DG(D4) DG(T2):DC(D3) DG(T3):DC(D2) DC(T4):DG(D1) chainA ( 24) TRP274 0 0 0 42 ( 25) ARG275 0 0 0 12 ( 27) LEU277 0 0 0 3 prot.sequence nhnlhiteklevlakaysvqgdkWRaLgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetkylgvcrlpgpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvgpgrvlptptekdvfrllglpyrepaerdw >3uq2_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF THE POST-CATALYTIC PRODUCT COMPLEX OF POLYMERASE LAMBDA WITH AN RCMP INSERTED OPPOSITE A TEMPLATING G AND DAMP INSERTED OPPOSITE A TEMPLATING T AT THE PRIMER TERMINUS. organism=Homo sapiens DNA sequence DG(D1):DC(T4) DC(D2):DG(T3) DC(D3):DG(T2) DG(D4):DC(T1) chainA ( 22) TRP274 42 0 0 0 ( 23) ARG275 14 0 0 0 ( 25) LEU277 3 0 0 0 prot.sequence nlhiteklevlakaysvqgdkWRaLgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetkylgvcrlpgpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgakvgpgrvlptptekdvfrllglpyrepaerdw >3us0_A:p53-like_transcription_factors; title=STRUCTURE OF P63 DNA BINDING DOMAIN IN COMPLEX WITH A 22 BASE PAIR A/T RICH RESPONSE ELEMENT CONTAINING A TWO BASE PAIR "AT" SPACER BETWEEN HALF SITES organism=Homo sapiens DNA sequence DA(F1):DT(E22) DA(F2):DT(E21) DA(F3):DT(E20) DC(F4):DG(E19) DA(F5):DT(E18) DT(F6):DA(E17) DG(F7):DC(E16) DT(F8):DA(E15) DT(F9):DA(E14) DT(F10):DA(E13) DA(F11):DT(E12) DT(F12):DA(E11) DA(F13):DT(E10) DA(F14):DT(E9) DA(F15):DT(E8) DC(F16):DG(E7) DA(F17):DT(E6) DT(F18):DA(E5) DG(F19):DC(E4) DT(F20):DA(E3) DT(F21):DA(E2) DT(F22):DA(E1) chainA (182) ALA307 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) CYS308 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG311 0 0 2 10 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spsntdypgphsfdvsfqqsstaksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi >3us0_ABCD:p53-like_transcription_factors; title=STRUCTURE OF P63 DNA BINDING DOMAIN IN COMPLEX WITH A 22 BASE PAIR A/T RICH RESPONSE ELEMENT CONTAINING A TWO BASE PAIR "AT" SPACER BETWEEN HALF SITES organism=Homo sapiens DNA sequence DA(E1):DT(F22) DA(E2):DT(F21) DA(E3):DT(F20) DC(E4):DG(F19) DA(E5):DT(F18) DT(E6):DA(F17) DG(E7):DC(F16) DT(E8):DA(F15) DT(E9):DA(F14) DT(E10):DA(F13) DA(E11):DT(F12) DT(E12):DA(F11) DA(E13):DT(F10) DA(E14):DT(F9) DA(E15):DT(F8) DC(E16):DG(F7) DA(E17):DT(F6) DT(E18):DA(F5) DG(E19):DC(F4) DT(E20):DA(F3) DT(E21):DA(F2) DT(E22):DA(F1) chainA (182) ALA307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (183) CYS308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (186) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 2 0 0 chainB (178) ALA307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (179) CYS308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (182) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 10 0 0 0 0 0 chainC (183) ALA307 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS308 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG311 0 0 1 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (177) ALA307 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) CYS308 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG311 0 0 0 0 0 10 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spsntdypgphsfdvsfqqsstaksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi/maspsntdypgphsfdvsfqsatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsirk/aspsntdypgphsfdvsfqqsstaksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi/maspsntdypgphsfdvsfqatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsirk >3us2_ABCD:p53-like_transcription_factors; title=STRUCTURE OF P63 DNA BINDING DOMAIN IN COMPLEX WITH A 19 BASE PAIR A/T RICH RESPONSE ELEMENT CONTAINING TWO HALF SITES WITH A SINGLE BASE PAIR OVERLAP organism=Homo sapiens DNA sequence DA(E1):DT(F19) DA(E2):DT(F18) DA(E3):DT(F17) DC(E4):DG(F16) DA(E5):DT(F15) DT(E6):DA(F14) DG(E7):DC(F13) DT(E8):DA(F12) DT(E9):DA(F11) DA(E10):DT(F10) DA(E11):DT(F9) DA(E12):DT(F8) DC(E13):DG(F7) DA(E14):DT(F6) DT(E15):DA(F5) DG(E16):DC(F4) DT(E17):DA(F3) DT(E18):DA(F2) DT(E19):DA(F1) chainA (181) ALA307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (182) CYS308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (185) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 10 0 0 0 chainB (169) ALA307 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (170) CYS308 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (173) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 10 18 0 0 0 0 0 chainC (181) ALA307 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (182) CYS308 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 (185) ARG311 0 0 0 0 0 16 10 0 0 0 0 0 0 0 0 0 0 0 0 chainD (169) ALA307 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) CYS308 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG311 0 0 0 10 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spsntdypgphsfdvsfqqsstksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadeds/dypgphsfdvsfqtwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi/spsntdypgphsfdvsfqqsstksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadeds/dypgphsfdvsfqtwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi >3us2_G:p53-like_transcription_factors; title=STRUCTURE OF P63 DNA BINDING DOMAIN IN COMPLEX WITH A 19 BASE PAIR A/T RICH RESPONSE ELEMENT CONTAINING TWO HALF SITES WITH A SINGLE BASE PAIR OVERLAP organism=Homo sapiens DNA sequence DA(K1):DT(L19) DA(K2):DT(L18) DA(K3):DT(L17) DC(K4):DG(L16) DA(K5):DT(L15) DT(K6):DA(L14) DG(K7):DC(L13) DT(K8):DA(L12) DT(K9):DA(L11) DA(K10):DT(L10) DA(K11):DT(L9) DA(K12):DT(L8) DC(K13):DG(L7) DA(K14):DT(L6) DT(K15):DA(L5) DG(K16):DC(L4) DT(K17):DA(L3) DT(K18):DA(L2) DT(K19):DA(L1) chainG (181) ALA307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (182) CYS308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (185) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 10 0 0 0 prot.sequence spsntdypgphsfdvsfqqsstksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadeds >3us2_GHIJ:p53-like_transcription_factors; title=STRUCTURE OF P63 DNA BINDING DOMAIN IN COMPLEX WITH A 19 BASE PAIR A/T RICH RESPONSE ELEMENT CONTAINING TWO HALF SITES WITH A SINGLE BASE PAIR OVERLAP organism=Homo sapiens DNA sequence DA(L1):DT(K19) DA(L2):DT(K18) DA(L3):DT(K17) DC(L4):DG(K16) DA(L5):DT(K15) DT(L6):DA(K14) DG(L7):DC(K13) DT(L8):DA(K12) DT(L9):DA(K11) DT(L10):DA(K10) DA(L11):DT(K9) DA(L12):DT(K8) DC(L13):DG(K7) DA(L14):DT(K6) DT(L15):DA(K5) DG(L16):DC(K4) DT(L17):DA(K3) DT(L18):DA(K2) DT(L19):DA(K1) chainG (181) ALA307 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) CYS308 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG311 0 0 0 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (169) ALA307 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (170) CYS308 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 (173) ARG311 0 0 0 0 0 18 10 0 0 0 0 0 0 0 0 0 0 0 0 chainI (181) ALA307 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (182) CYS308 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (185) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 10 16 0 0 0 0 0 chainJ (169) ALA307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (170) CYS308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (173) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 10 0 0 0 prot.sequence spsntdypgphsfdvsfqqsstksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadeds/dypgphsfdvsfqtwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi/spsntdypgphsfdvsfqqsstksatwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadeds/dypgphsfdvsfqtwtystelkklycqiaktcpiqikvmtpppqgavirampvykkaehvtevvkrcpnhelsrefnegqiappshlirvegnshaqyvedpitgrqsvlvpyeppqvgtefttvlynfmcnsscvggmnrrpiliivtletrdgqvlgrrcfearicACpgRdrkadedsi >3ut9_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE ASSEMBLED WITH A PALINDROMIC WIDOM '601' DERIVATIVE (NCP-601L) organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DC(I-68):DG(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DG(I68):DC(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB chainC chainD ( 2) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dnIQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akTRssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/rRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krHRkvlrdniqgitkpairrlarrggVkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/rrktrkesyaiyvykvlkqvhpdtgiSskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3uta_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE ASSEMBLED WITH AN ALPHA- SATELLITE SEQUENCE CONTAINING TWO TTAAA ELEMENTS (NCP-TA2) organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DT(J-15):DA(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DA(J15):DT(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 2) HIS39 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgiSskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgisskaMsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3utb_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE ASSEMBLED WITH THE 146B ALPHA-SATELLITE SEQUENCE (NCP146B) organism=XENOPUS LAEVIS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DT(J-70):DA(I70) DC(J-69):DG(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DA(J-65):DT(I65) DT(J-64):DA(I64) DA(J-63):DT(I63) DT(J-62):DA(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DC(J-59):DG(I59) DT(J-58):DA(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DC(J-55):DG(I55) DG(J-54):DC(I54) DG(J-53):DC(I53) DA(J-52):DT(I52) DT(J-51):DA(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DT(J-48):DA(I48) DA(J-47):DT(I47) DG(J-46):DC(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DA(J-42):DT(I42) DA(J-41):DT(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DG(J-38):DC(I38) DT(J-37):DA(I37) DG(J-36):DC(I36) DT(J-35):DA(I35) DC(J-34):DG(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DG(J-26):DC(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DG(J-17):DC(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DA(J-6):DT(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DG(J10):DC(I-10) DT(J11):DA(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DA(J23):DT(I-23) DG(J24):DC(I-24) DC(J25):DG(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DG(J33):DC(I-33) DA(J34):DT(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DA(J38):DT(I-38) DC(J39):DG(I-39) DT(J40):DA(I-40) DT(J41):DA(I-41) DT(J42):DA(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DC(J45):DG(I-45) DT(J46):DA(I-46) DA(J47):DT(I-47) DC(J48):DG(I-48) DG(J49):DC(I-49) DA(J50):DT(I-50) DT(J51):DA(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DG(J54):DC(I-54) DC(J55):DG(I-55) DA(J56):DT(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DG(J59):DC(I-59) DG(J60):DC(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DT(J65):DA(I-65) DT(J66):DA(I-66) DG(J67):DC(I-67) DG(J68):DC(I-68) DA(J69):DT(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllRkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/kkRrktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >3utb_G:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE ASSEMBLED WITH THE 146B ALPHA-SATELLITE SEQUENCE (NCP146B) organism=? DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DT(J-70):DA(I70) DC(J-69):DG(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DA(J-65):DT(I65) DT(J-64):DA(I64) DA(J-63):DT(I63) DT(J-62):DA(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DC(J-59):DG(I59) DT(J-58):DA(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DC(J-55):DG(I55) DG(J-54):DC(I54) DG(J-53):DC(I53) DA(J-52):DT(I52) DT(J-51):DA(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DT(J-48):DA(I48) DA(J-47):DT(I47) DG(J-46):DC(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DA(J-42):DT(I42) DA(J-41):DT(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DG(J-38):DC(I38) DT(J-37):DA(I37) DG(J-36):DC(I36) DT(J-35):DA(I35) DC(J-34):DG(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DG(J-26):DC(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DG(J-17):DC(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DA(J-6):DT(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DG(J10):DC(I-10) DT(J11):DA(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DA(J23):DT(I-23) DG(J24):DC(I-24) DC(J25):DG(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DG(J33):DC(I-33) DA(J34):DT(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DA(J38):DT(I-38) DC(J39):DG(I-39) DT(J40):DA(I-40) DT(J41):DA(I-41) DT(J42):DA(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DC(J45):DG(I-45) DT(J46):DA(I-46) DA(J47):DT(I-47) DC(J48):DG(I-48) DG(J49):DC(I-49) DA(J50):DT(I-50) DT(J51):DA(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DG(J54):DC(I-54) DC(J55):DG(I-55) DA(J56):DT(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DG(J59):DC(I-59) DG(J60):DC(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DT(J65):DA(I-65) DT(J66):DA(I-66) DG(J67):DC(I-67) DG(J68):DC(I-68) DA(J69):DT(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >3uvf_B:Homing_endonucleases; title=EXPANDING LAGALIDADG ENDONUCLEASE SCAFFOLD DIVERSITY BY RAPIDLY SURVEYING EVOLUTIONARY SEQUENCE SPACE organism=Trichoderma reesei DNA sequence DG(E401):DC(F527) DC(E402):DG(F526) DG(E403):DC(F525) DC(E404):DG(F524) DT(E405):DA(F523) DG(E406):DC(F522) DA(E407):DT(F521) DG(E408):DC(F520) DG(E409):DC(F519) DA(E410):DT(F518) DG(E411):DC(F517) DG(E412):DC(F516) DT(E413):DA(F515) DT(E414):DA(F514) DT(E415):DA(F513) DC(E416):DG(F512) DT(E417):DA(F511) DC(E418):DG(F510) DT(E419):DA(F509) DG(E420):DC(F508) DT(E421):DA(F507) DT(E422):DA(F506) DA(E423):DT(F505) DA(E424):DT(F504) DG(E425):DC(F503) DC(E426):DG(F502) DG(E427):DC(F501) chainB ( 19) TYR20 0 0 0 0 0 0 0 0 0 4 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) SER22 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) THR24 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS26 0 0 0 0 1 9 15 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) TYR29 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) THR31 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) GLU33 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLU37 0 0 0 0 0 0 0 0 0 0 3 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 0 24 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG63 0 0 0 0 0 0 0 0 0 0 14 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG72 0 0 0 0 0 0 0 4 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) CYS152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (153) SER154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (155) TYR156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 3 0 0 0 0 0 0 (157) LEU158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 (158) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (163) TYR164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 0 0 0 (165) ILE166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (167) SER168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (169) ASP170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 3 0 0 0 0 0 0 0 0 (171) ALA172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (193) TYR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 (197) THR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (199) CYS200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (201) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 7 18 0 0 0 0 0 0 0 0 (203) LYS204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 (205) THR206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (244) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence shmdltyaylvglfegdgYfSiTkKgkYlTyElgiElsikdvqliykikdilgvgkvsfRkRneieMvslRiRdknhlknfilpifdkypmlsnkqydylrfkdallsniiysddlpeyarsnesinsvdsiintsyfsawlvgfieaegCfStYkLNkdddYlIaSfDiAqkdgdilisaihkylsfttkiYldkTnCsRlKvTgvrsvknvvkfiqgapvkllgnkklqyklwikqlrkisRysekiqlpsny >3uxp_B:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CO-CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA MUTATOR I260Q: ENZYME- DNA-DDTTP organism=Rattus norvegicus DNA sequence DC(E4):DG(D7) DT(E5):DA(D6) DC(E6):DG(D5) DA(E7):DT(D4) DC(E8):DG(D3) DA(E9):DT(D2) DT(E10):DA(D1) chainB (263) TYR271 1 0 0 0 0 0 0 (275) ARG283 2 0 0 0 0 0 0 (287) GLU295 0 1 0 0 0 0 0 prot.sequence etlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrknedklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetkfmgvcqlpsendeneyphrridirlqpkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdseqdifdyiqwryrepkdrs >3v1z_B:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF TYPE IIF RESTRICTION ENDONUCLEASE BSE634I WITH COGNATE DNA organism=Geobacillus stearothermophilus DNA sequence DT(D1) DC(D2) DG(D3) DC(D4) DG(D5) DC(D6) DC(D7) DG(D8) DG(D9) DC(D10) DG(D11) DC(D12) DG(D13) chainB ( 69) SER72 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 70) ASN73 0 0 0 0 2 3 0 0 0 0 0 0 0 (103) ASN106 0 0 1 1 0 0 0 0 0 0 0 0 0 (197) SER200 0 0 0 0 0 0 0 2 0 0 0 0 0 (199) ARG202 0 0 0 0 0 0 0 17 12 4 0 0 0 (202) ARG205 0 0 0 0 0 0 18 16 0 0 0 0 0 prot.sequence nltnsncveeykengktkirikpfnalielyhhqtptgsikenldklenyvkdvvkakglaiptsgafSNtrgtwfevmiaiqswnyrvkrelndyliikmpNvktfdfrkifdnetreklhqleksllthkqqvrlitsnpdlliirqkdlikseynlpinklthenidvaltlfkdiegkckwdslvagvglktSlRpdRrlqlvhegnilkslfahlkmaywnpkaefkyygassepvskadddalqtaathtivnvnstperavddifsltsfedidkmldqiik >3v20_B:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF TYPE IIF RESTRICTION ENDONUCLEASE BSE634I WITH COGNATE DNA organism=Geobacillus stearothermophilus DNA sequence DT(D1) DC(D2) DG(D3) DC(D4) DA(D5) DC(D6) DC(D7) DG(D8) DG(D9) DT(D10) DG(D11) DC(D12) DG(D13) chainB ( 68) SER72 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 69) ASN73 0 0 0 0 1 3 0 0 0 0 0 0 0 (102) ASN106 0 0 1 0 0 0 0 0 0 0 0 0 0 (196) SER200 0 0 0 0 0 0 0 2 0 0 0 0 0 (198) ARG202 0 0 0 0 0 0 0 16 13 1 0 0 0 (201) ARG205 0 0 0 0 0 0 15 15 0 0 0 0 0 prot.sequence ltnsncveeykengktkirikpfnalielyhhqtptgsikenldklenyvkdvvkakglaiptsgafSNtrgtwfevmiaiqswnyrvkrelndyliikmpNvktfdfrkifdnetreklhqleksllthkqqvrlitsnpdlliirqkdlikseynlpinklthenidvaltlfkdiegkckwdslvagvglktSlRpdRrlqlvhegnilkslfahlkmaywnpkaefkyygassepvskadddalqtaathtivnvnstperavddifsltsfedidkmldqiik >3v21_AB: title=CRYSTAL STRUCTURE OF TYPE IIF RESTRICTION ENDONUCLEASE BSE634I WITH COGNATE DNA organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(J2):DA(I13) DC(J3):DG(I12) DG(J4):DC(I11) DA(J5):DT(I10) DC(J6):DG(I9) DC(J7):DG(I8) DG(J8):DC(I7) DG(J9):DC(I6) DT(J10):DA(I5) DC(J11):DG(I4) DG(J12):DC(I3) DA(J13):DT(I2) chainA ( 69) SER72 0 0 0 0 0 1 5 1 0 0 0 0 ( 70) ASN73 0 0 0 0 0 0 0 4 5 7 0 0 (103) ASN106 0 0 0 0 0 0 0 0 0 0 1 0 (197) SER200 0 0 0 0 0 2 0 0 0 0 0 0 (199) ARG202 0 0 0 5 17 18 0 0 0 0 0 0 (200) PRO203 0 0 5 8 0 0 0 0 0 0 0 0 (201) ASP204 0 0 0 0 12 5 0 0 0 0 0 0 (202) ARG205 0 0 0 0 0 17 10 0 0 0 0 0 chainB ( 69) SER72 0 0 0 0 3 5 0 0 0 0 0 0 ( 70) ASN73 0 0 10 7 3 0 0 0 0 0 0 0 (197) SER200 0 0 0 0 0 0 2 0 0 0 0 0 (199) ARG202 0 0 0 0 0 0 20 19 4 0 0 0 (200) PRO203 0 0 0 0 0 0 0 0 8 6 0 0 (201) ASP204 0 0 0 0 0 0 5 12 0 0 0 0 (202) ARG205 0 0 0 0 0 10 17 0 0 0 0 0 prot.sequence nltnsncveeykengktkirikpfnalielyhhqtptgsikenldklenyvkdvvkakglaiptsgafSNtrgtwfevmiaiqswnyrvkrelndyliikmpNvktfdfrkifdnetreklhqleksllthkqqvrlitsnpdlliirqkdlikseynlpinklthenidvaltlfkdiegkckwdslvagvglktSlRPDRrlqlvhegnilkslfahlkmaywnpkaefkyygassepvskadddalqtaathtivnvnstperavddifsltsfedidkmldqiik/nltnsncveeykengktkirikpfnalielyhhqtptgsikenldklenyvkdvvkakglaiptsgafSNtrgtwfevmiaiqswnyrvkrelndyliikmpnvktfdfrkifdnetreklhqleksllthkqqvrlitsnpdlliirqkdlikseynlpinklthenidvaltlfkdiegkckwdslvagvglktSlRPDRrlqlvhegnilkslfahlkmaywnpkaefkyygassepvskadddalqtaathtivnvnstperavddifsltsfedidkmldqiik >3v21_CD: title=CRYSTAL STRUCTURE OF TYPE IIF RESTRICTION ENDONUCLEASE BSE634I WITH COGNATE DNA organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(K2):DA(L13) DC(K3):DG(L12) DG(K4):DC(L11) DA(K5):DT(L10) DC(K6):DG(L9) DC(K7):DG(L8) DG(K8):DC(L7) DG(K9):DC(L6) DT(K10):DA(L5) DC(K11):DG(L4) DG(K12):DC(L3) DA(K13):DT(L2) chainC ( 19) ARG23 0 0 2 0 0 0 0 0 0 0 0 0 ( 68) SER72 0 0 0 0 1 4 0 0 0 0 0 0 ( 69) ASN73 0 0 8 5 4 0 0 0 0 0 0 0 (104) LYS108 2 4 0 0 0 0 0 0 0 0 0 0 (196) SER200 0 0 0 0 0 0 2 0 0 0 0 0 (198) ARG202 0 0 0 0 0 0 23 20 4 0 0 0 (199) PRO203 0 0 0 0 0 0 0 0 9 5 0 0 (200) ASP204 0 0 0 0 0 0 5 12 0 0 0 0 (201) ARG205 0 0 0 0 0 12 17 0 0 0 0 0 chainD ( 69) SER72 0 0 0 0 0 0 3 1 0 0 0 0 ( 70) ASN73 0 0 0 0 0 0 0 4 5 6 0 0 (197) SER200 0 0 0 0 0 2 0 0 0 0 0 0 (199) ARG202 0 0 0 6 19 18 0 0 0 0 0 0 (200) PRO203 0 0 4 8 0 0 0 0 0 0 0 0 (201) ASP204 0 0 0 0 12 5 0 0 0 0 0 0 (202) ARG205 0 0 0 0 0 14 10 0 0 0 0 0 prot.sequence ltnsncveeykengktkiRikpfnalielyhhqtptgsikenldklenyvkdvvkakglaiptsgafSNtrgtwfevmiaiqswnyrvkrelndyliikmpnvKtfdfrkifdnetreklhqleksllthkqqvrlitsnpdlliirqkdlikseynlpinklthenidvaltlfkdiegkckwdslvagvglktSlRPDRrlqlvhegnilkslfahlkmaywnpkaefkyygassepvskadddalqtaathtivnvnstperavddifsltsfedidkmldqiik/nltnsncveeykengktkirikpfnalielyhhqtptgsikenldklenyvkdvvkakglaiptsgafSNtrgtwfevmiaiqswnyrvkrelndyliikmpnvktfdfrkifdnetreklhqleksllthkqqvrlitsnpdlliirqkdlikseynlpinklthenidvaltlfkdiegkckwdslvagvglktSlRPDRrlqlvhegnilkslfahlkmaywnpkaefkyygassepvskadddalqtaathtivnvnstperavddifsltsfedidkmldqiik >3v21_EF: title=CRYSTAL STRUCTURE OF TYPE IIF RESTRICTION ENDONUCLEASE BSE634I WITH COGNATE DNA organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(N2):DA(M13) DC(N3):DG(M12) DG(N4):DC(M11) DA(N5):DT(M10) DC(N6):DG(M9) DC(N7):DG(M8) DG(N8):DC(M7) DG(N9):DC(M6) DT(N10):DA(M5) DC(N11):DG(M4) DG(N12):DC(M3) DA(N13):DT(M2) chainE ( 69) SER72 0 0 0 0 0 0 3 1 0 0 0 0 ( 70) ASN73 0 0 0 0 0 0 0 3 7 10 0 0 (197) SER200 0 0 0 0 0 2 0 0 0 0 0 0 (199) ARG202 0 0 0 5 20 23 0 0 0 0 0 0 (200) PRO203 0 0 5 9 0 0 0 0 0 0 0 0 (201) ASP204 0 0 0 0 12 5 0 0 0 0 0 0 (202) ARG205 0 0 0 0 0 17 11 0 0 0 0 0 chainF ( 67) SER72 0 0 0 0 1 2 0 0 0 0 0 0 ( 68) ASN73 0 0 10 6 2 0 0 0 0 0 0 0 (103) LYS108 2 4 0 0 0 0 0 0 0 0 0 0 (195) SER200 0 0 0 0 0 0 2 0 0 0 0 0 (197) ARG202 0 0 0 0 0 0 18 18 7 0 0 0 (198) PRO203 0 0 0 0 0 0 0 0 8 6 0 0 (199) ASP204 0 0 0 0 0 0 5 12 0 0 0 0 (200) ARG205 0 0 0 0 0 10 14 0 0 0 0 0 prot.sequence nltnsncveeykengktkirikpfnalielyhhqtptgsikenldklenyvkdvvkakglaiptsgafSNtrgtwfevmiaiqswnyrvkrelndyliikmpnvktfdfrkifdnetreklhqleksllthkqqvrlitsnpdlliirqkdlikseynlpinklthenidvaltlfkdiegkckwdslvagvglktSlRPDRrlqlvhegnilkslfahlkmaywnpkaefkyygassepvskadddalqtaathtivnvnstperavddifsltsfedidkmldqiik/tnsncveeykengktkirikpfnalielyhhqtptgsikenldklenyvkdvvkakglaiptsgafSNtrgtwfevmiaiqswnyrvkrelndyliikmpnvKtfdfrkifdnetreklhqleksllthkqqvrlitsnpdlliirqkdlikseynlpinklthenidvaltlfkdiegkckwdslvagvglktSlRPDRrlqlvhegnilkslfahlkmaywnpkaefkyygassepvskadddalqtaathtivnvnstperavddifsltsfedidkmldqiik >3v21_F:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF TYPE IIF RESTRICTION ENDONUCLEASE BSE634I WITH COGNATE DNA organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(M2):DA(N13) DC(M3):DG(N12) DG(M4):DC(N11) DA(M5):DT(N10) DC(M6):DG(N9) DC(M7):DG(N8) DG(M8):DC(N7) DG(M9):DC(N6) DT(M10):DA(N5) DC(M11):DG(N4) DG(M12):DC(N3) DA(M13):DT(N2) chainF ( 67) SER72 0 0 0 0 0 0 2 1 0 0 0 0 ( 68) ASN73 0 0 0 0 0 0 0 2 6 10 0 0 (103) LYS108 0 0 0 0 0 0 0 0 0 0 4 2 (195) SER200 0 0 0 0 0 2 0 0 0 0 0 0 (197) ARG202 0 0 0 7 18 18 0 0 0 0 0 0 (198) PRO203 0 0 6 8 0 0 0 0 0 0 0 0 (199) ASP204 0 0 0 0 12 5 0 0 0 0 0 0 (200) ARG205 0 0 0 0 0 14 10 0 0 0 0 0 prot.sequence tnsncveeykengktkirikpfnalielyhhqtptgsikenldklenyvkdvvkakglaiptsgafSNtrgtwfevmiaiqswnyrvkrelndyliikmpnvKtfdfrkifdnetreklhqleksllthkqqvrlitsnpdlliirqkdlikseynlpinklthenidvaltlfkdiegkckwdslvagvglktSlRPDRrlqlvhegnilkslfahlkmaywnpkaefkyygassepvskadddalqtaathtivnvnstperavddifsltsfedidkmldqiik >3v21_GH: title=CRYSTAL STRUCTURE OF TYPE IIF RESTRICTION ENDONUCLEASE BSE634I WITH COGNATE DNA organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(O2):DA(P13) DC(O3):DG(P12) DG(O4):DC(P11) DA(O5):DT(P10) DC(O6):DG(P9) DC(O7):DG(P8) DG(O8):DC(P7) DG(O9):DC(P6) DT(O10):DA(P5) DC(O11):DG(P4) DG(O12):DC(P3) DA(O13):DT(P2) chainG ( 69) SER72 0 0 0 0 1 4 0 0 0 0 0 0 ( 70) ASN73 0 0 7 5 4 0 0 0 0 0 0 0 (103) ASN106 0 1 0 0 0 0 0 0 0 0 0 0 (197) SER200 0 0 0 0 0 0 2 0 0 0 0 0 (199) ARG202 0 0 0 0 0 0 22 20 6 0 0 0 (200) PRO203 0 0 0 0 0 0 0 0 8 6 0 0 (201) ASP204 0 0 0 0 0 0 5 12 0 0 0 0 (202) ARG205 0 0 0 0 0 12 17 0 0 0 0 0 chainH ( 70) SER72 0 0 0 0 0 0 5 1 0 0 0 0 ( 71) ASN73 0 0 0 0 0 0 0 4 5 7 0 0 (198) SER200 0 0 0 0 0 2 0 0 0 0 0 0 (200) ARG202 0 0 0 5 19 22 0 0 0 0 0 0 (201) PRO203 0 0 6 8 0 0 0 0 0 0 0 0 (202) ASP204 0 0 0 1 12 5 0 0 0 0 0 0 (203) ARG205 0 0 0 0 0 17 12 0 0 0 0 0 prot.sequence nltnsncveeykengktkirikpfnalielyhhqtptgsikenldklenyvkdvvkakglaiptsgafSNtrgtwfevmiaiqswnyrvkrelndyliikmpNvktfdfrkifdnetreklhqleksllthkqqvrlitsnpdlliirqkdlikseynlpinklthenidvaltlfkdiegkckwdslvagvglktSlRPDRrlqlvhegnilkslfahlkmaywnpkaefkyygassepvskadddalqtaathtivnvnstperavddifsltsfedidkmldqiik/tnltnsncveeykengktkirikpfnalielyhhqtptgsikenldklenyvkdvvkakglaiptsgafSNtrgtwfevmiaiqswnyrvkrelndyliikmpnvktfdfrkifdnetreklhqleksllthkqqvrlitsnpdlliirqkdlikseynlpinklthenidvaltlfkdiegkckwdslvagvglktSlRPDRrlqlvhegnilkslfahlkmaywnpkaefkyygassepvskadddalqtaathtivnvnstperavddifsltsfedidkmldqiik >3v4i_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) WITH DNA AND AZTTP organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) ATM(P822):DA(T706) AZT(A823):DA(T705) chainA ( 62) PHE61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 64) ILE63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 66) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 71) LYS70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 ( 75) LEU74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 ( 95) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 (111) ASP110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (114) ASP113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (115) ALA114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (116) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (152) GLN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (184) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 (185) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (186) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (220) LYS219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (259) CYS258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (284) LEU283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) GLN475 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >3v4i_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) WITH DNA AND AZTTP organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) ATM(P822):DA(T706) AZT(A823):DA(T705) chainA ( 62) PHE61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 64) ILE63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 66) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 71) LYS70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 73) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 ( 75) LEU74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 ( 95) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 (111) ASP110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (114) ASP113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (115) ALA114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (116) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (152) GLN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (184) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 (185) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (186) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (220) LYS219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (259) CYS258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (284) LEU283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) GLN475 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikKkDstkwrklvdfRelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddLyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavQkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3v4i_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) WITH DNA AND AZTTP organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(F803):DG(E725) DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) MRG(F817):DC(E711) DC(F818):DG(E710) DG(F819):DC(E709) DC(F820):DG(E708) DC(F821):DG(E707) ATM(F822):DA(E706) AZT(C823):DA(E705) chainC ( 62) PHE61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 64) ILE63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 66) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 73) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 ( 75) LEU74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 95) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 (111) ASP110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (114) ASP113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (115) ALA114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (116) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (152) GLN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (184) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 (185) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (186) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (220) LYS219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (259) CYS258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (284) LEU283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) GLN475 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikKkDstkwrklvdfRelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddLyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavQkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3v4r_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF A UVRB DIMER-DNA COMPLEX organism=Bacillus subtilis DNA sequence DA(C2) DC(C3) DT(C4) DG(C5) DT(C6) DT(C7) DT(C8) chainB ( 94) TYR96 0 0 0 0 0 26 0 ( 96) PRO98 0 0 0 0 0 6 0 (144) TYR146 0 0 0 0 1 0 0 (336) GLN346 0 0 3 2 0 0 0 (340) MET350 0 0 0 3 2 0 0 (347) ARG357 0 0 0 0 0 6 0 (493) ASN503 2 0 0 0 0 0 0 (517) PHE527 48 0 0 0 0 0 0 (518) LEU528 1 0 0 0 0 0 0 prot.sequence drfelvskyqpqgdqpkaieklvkgiqegkkhqtllgatgtgktftvsnlikevnkptlviahnktlagqlysefkeffpnnaveyfvsyydyYqPeayvpqtdtfiekdasindeidklrhsatsalferrdviiiasvsciYglgspeeyremvvslrtemeiernellrklvdiqyarndidfqrgtfrvrgdvveifpasrdehcvrveffgdeierirevdaltgeilgdrdhvaifpasmekaiqniekeleeqlkvmhengklleaqrleqrtrydlemmremgfcsgienysrhltlrppgstpytlldyfpddfmivvdeshvtipQvrgMfngdqaRkqvlvdhgfrlpsaldnrplrfeefekhmhnivyvsatpgpyeiehtdemveqiirptglldplidvrpiegqiddligeiqariernervlvttltkkmsedltdylkeigikvnylhseiktlerieiirdlrlgkydvlvgiNllregldipevslvaildadkegFLrsersliqtigraarnaegrvimyadkitksmeiainetkrrreqqerfneehgitpktin >3v6d_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) CROSS-LINKED WITH AZT-TERMINATED DNA organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DA(T706):ATM(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 95) ILE94 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) MET184 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) CYS258 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) LEU283 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3v6d_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) CROSS-LINKED WITH AZT-TERMINATED DNA organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DA(E706):ATM(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 94) ILE94 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) CYS258 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) LEU283 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteaVqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3v6h_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REPLICATION OF N2,3-ETHENOGUANINE BY DNA POLYMERASES organism=Sulfolobus solfataricus P2 DNA sequence DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) chainB (243) LYS243 0 0 0 0 0 0 2 0 0 0 (244) SER244 0 0 0 0 0 0 0 1 0 0 (336) ARG336 0 0 0 0 0 0 0 0 7 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrKSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfie >3v6j_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REPLICATION OF N2,3-ETHENOGUANINE BY DNA POLYMERASES organism=Sulfolobus solfataricus P2 DNA sequence DA(B7):DT(P12) DA(B8):DT(P11) DT(B9):DA(P10) DC(B10):DG(P9) DC(B11):DG(P8) DT(B12):DA(P7) DT(B13):DA(P6) DC(B14):DG(P5) DC(B15):DG(P4) DC(B16):DG(P3) DC(B17):DG(P2) chainA (245) SER244 0 0 1 0 0 0 0 0 0 0 0 (337) ARG336 0 7 0 0 0 0 0 0 0 0 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeaKakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfie >3v6k_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REPLICATION OF N2,3-ETHENOGUANINE BY DNA POLYMERASES organism=Sulfolobus solfataricus P2 DNA sequence DG(B6):DC(P13) DA(B7):DT(P12) DA(B8):DT(P11) DT(B9):DA(P10) DC(B10):DG(P9) DC(B11):DG(P8) DT(B12):DA(P7) DT(B13):DA(P6) DC(B14):DG(P5) chainA (244) SER244 0 0 0 1 0 0 0 0 0 (332) ARG332 4 0 0 0 0 0 0 0 0 (336) ARG336 0 0 2 1 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfie >3v6t_B:Thiolase-like; title=CRYSTAL STRUCTURE OF THE DNA-BOUND DHAX3, A TAL EFFECTOR, AT 1.85 ANGSTROM organism=XANTHOMONAS DNA sequence DT(G-2):DA(H2) DG(G-1):DC(H1) DT(G0):DA(H0) DC(G1):DG(H-1) DC(G2):DG(H-2) DC(G3):DG(H-3) DT(G4):DA(H-4) DT(G5):DA(H-5) DT(G6):DA(H-6) DA(G7):DT(H-7) DT(G8):DA(H-8) DC(G9):DG(H-9) DT(G10):DA(H-10) DC(G11):DG(H-11) DT(G12):DA(H-12) DC(G13):DG(H-13) DT(G14):DA(H-14) chainB ( 36) ARG266 0 0 0 0 5 12 11 0 0 0 0 0 0 0 0 0 0 ( 71) ASP301 0 0 8 7 2 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP335 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 (139) ASP369 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 (275) SER505 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 (343) ASP573 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 (411) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 0 prot.sequence qwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnSggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdaltndhlvalaclggrpaldavkkl >3v72_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA MUTATOR E295K: ENZYME- DSDNA organism=Rattus norvegicus DNA sequence DA(P0):DT(T11) DT(P1):DA(T10) DG(P2):DC(T9) DT(P3):DA(T8) DG(P4):DC(T7) DA(P5):DT(T6) DG(P6):DC(T5) DT(P7):DA(T4) chainA (226) LYS234 0 0 0 0 0 3 1 0 prot.sequence etlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrknedklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetKfmgvcqlpsendeneyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftinkytirplgvtgvageplpvdseqdifdyiqwryrepkdrse >3v79_C:p53-like_transcription_factors;DNA-binding_protein_LAG-1_CSL;E_set_domains; title=STRUCTURE OF HUMAN NOTCH1 TRANSCRIPTION COMPLEX INCLUDING CSL, RAM, ANK, AND MAML-1 ON HES-1 PROMOTER DNA SEQUENCE organism=HOMO SAPIENS DNA sequence DG(X0):DC(Y118) DT(X1):DA(Y117) DT(X2):DA(Y116) DA(X3):DT(Y115) DC(X4):DG(Y114) DT(X5):DA(Y113) DG(X6):DC(Y112) DT(X7):DA(Y111) DG(X8):DC(Y110) DG(X9):DC(Y109) DG(X10):DC(Y108) DA(X11):DT(Y107) DA(X12):DT(Y106) DA(X13):DT(Y105) DG(X14):DC(Y104) DA(X15):DT(Y103) DA(X16):DT(Y102) DA(X17):DT(Y101) chainC ( 36) TYR46 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 ( 39) GLU49 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 41) ARG51 0 0 0 0 0 0 0 7 6 2 0 0 0 0 0 0 0 0 (141) SER151 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 (142) LYS152 0 0 0 0 0 0 0 0 0 0 6 6 3 0 0 0 0 0 (171) SER181 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 (172) GLN182 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rpppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskkkqslknadlciasgtkvalfnrlrSQtvstrylhveggnfhassqqwgaffihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkepnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlngggdvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgiiystsltftytpep >3v7j_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CO-CRYSTAL STRUCTURE OF WILD TYPE RAT POLYMERASE BETA: ENZYME-DNA BINARY COMPLEX organism=Rattus norvegicus DNA sequence DA(P0):DT(T11) DT(P1):DA(T10) DG(P2):DC(T9) DT(P3):DA(T8) DG(P4):DC(T7) DA(P5):DT(T6) DG(P6):DC(T5) DT(P7):DA(T4) chainA (226) LYS234 0 0 0 0 0 3 1 0 prot.sequence etlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrknedklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetKfmgvcqlpsendeneyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdseqdifdyiqwryrepkdrse >3v7k_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CO-CRYSTAL STRUCTURE OF K72E VARIANT OF RAT POLYMERASE BETA: ENZYME- DNA BINARY COMPLEX organism=Rattus norvegicus DNA sequence DT(P1):DA(T10) DG(P2):DC(T9) DT(P3):DA(T8) DG(P4):DC(T7) DA(P5):DT(T6) DG(P6):DC(T5) DT(P7):DA(T4) chainA (230) LYS234 0 0 0 0 0 1 0 prot.sequence kapqetlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaeeideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrknedklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetKfmgvcqlpsendeneyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdseqdifdyiqwryrepkdrse >3v81_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) WITH DNA AND THE NONNUCLEOSIDE INHIBITOR NEVIRAPINE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DA(T706):ATM(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 64) ILE63 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) MET230 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) CYS258 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) LEU283 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 (476) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaIkkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkDstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlPekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3v81_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) WITH DNA AND THE NONNUCLEOSIDE INHIBITOR NEVIRAPINE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(F803):DG(E725) DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) MRG(F817):DC(E711) DC(F818):DG(E710) DG(F819):DC(E709) DC(F820):DG(E708) DC(F821):DG(E707) ATM(F822):DA(E706) chainC ( 95) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (231) MET230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (259) CYS258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (284) LEU283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) GLN475 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >3v81_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) WITH DNA AND THE NONNUCLEOSIDE INHIBITOR NEVIRAPINE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DA(E706):ATM(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 95) ILE94 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) MET230 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) CYS258 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) LEU283 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 0 0 (476) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainD prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlPekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavQkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >3va3_AB:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF RNASE T IN COMPLEX WITH A DUPLEX DNA PRODUCT (STEM LOOP DNA WITH 2 NUCLEOTIDE 3' OVERHANG) organism=Escherichia coli DNA sequence DG(C1):DC(C16) DG(C2):DC(C15) DC(C3):DG(C14) DC(C4):DG(C13) chainA ( 24) PHE29 31 0 0 0 chainB (138) PRO145 0 0 1 0 (139) PHE146 2 3 0 0 prot.sequence qltglcdrfrgfypvvidvetagFnaktdalleiaaitlkmdeqgwlmpdttlhfhvepfvganlqpealafngidpndpdrgavsgyealheifkvvrkgikasgcnraimvahnanfdhsfmmaaaeraslkrnpfhpfatfdtaalaglalgqtvlskacqtagmdfdstqahsalydtertavlfceivnrwkrlggwpls/tglcdrfrgfypvvidvetagfnaktdalleiaaitlkmdeqgwlmpdttlhfhvepfvganlqpealafngidpndpdrgavsgyealheifkvvrkgikasgcnraimvahnanfdhsfmmaaaeraslkrnpfhPFatfdtaalaglalgqtvlskacqtagmdfdstqahsalydtertavlfceivnrwkrlggwplsaa >3va3_B:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF RNASE T IN COMPLEX WITH A DUPLEX DNA PRODUCT (STEM LOOP DNA WITH 2 NUCLEOTIDE 3' OVERHANG) organism=Escherichia coli DNA sequence DG(C1):DC(C16) DG(C2):DC(C15) DC(C3):DG(C14) DC(C4):DG(C13) chainB (138) PRO145 0 0 1 0 (139) PHE146 2 3 0 0 prot.sequence tglcdrfrgfypvvidvetagfnaktdalleiaaitlkmdeqgwlmpdttlhfhvepfvganlqpealafngidpndpdrgavsgyealheifkvvrkgikasgcnraimvahnanfdhsfmmaaaeraslkrnpfhPFatfdtaalaglalgqtvlskacqtagmdfdstqahsalydtertavlfceivnrwkrlggwplsaa >3val_D:RNA-binding_domain,_RBD; title=STRUCTURE OF U2AF65 VARIANT WITH BRU5C1 DNA organism=HOMO SAPIENS DNA sequence DC(K1) DU(K2) DU(K3) DU(K4) DU(K6) DU(K7) chainD ( 98) LYS260 0 0 0 3 0 0 (100) PHE262 0 2 26 0 0 0 (127) ASN289 0 0 0 4 0 0 (129) VAL291 0 0 0 2 0 0 (142) PHE304 0 0 7 32 0 0 (166) LYS328 0 8 0 0 0 0 (169) LEU331 0 3 0 0 0 0 (171) GLN333 0 0 5 0 0 0 (173) ALA335 0 0 5 0 0 0 prot.sequence gplgsarrlyvgnipfgiteeammdffnaqmrlggltqapgnpvlavqinqdknfaflefrsvdettqamafdgiifqgqslkirrphdyqplpgahKlFigglpnylnddqvkelltsfgplkafNlVkdsatglskgyaFceyvdinvtdqaiaglngmqlgdKklLvQrAs >3vam_A:RNA-binding_domain,_RBD; title=STRUCTURE OF U2AF65 VARIANT WITH BRU5C2 DNA organism=? DNA sequence DC(P2) DU(P3) DU(P4) DU(P6) DU(P7) chainA ( 5) SER147 0 0 0 1 0 ( 8) ARG150 0 0 0 6 28 ( 53) LYS195 0 0 4 0 0 ( 54) ASN196 0 0 7 0 0 ( 57) PHE199 0 0 0 21 0 ( 87) PRO229 0 0 0 3 0 ( 88) HIS230 0 0 0 1 0 ( 89) ASP231 0 0 0 9 0 prot.sequence gplgSarRlyvgnipfgiteeammdffnaqmrlggltqapgnpvlavqinqdKNfaFlefrsvdettqamafdgiifqgqslkirrPHDyqplpgahklfigglpnylnddqvkelltsfgplkafnlvkdsatglskgyafceyvdinvtdqaiaglngmqlgdkkllvqras >3vd0_BD:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION organism=Homo sapiens DNA sequence DC(H512):DG(G511) DA(H513):DT(G510) DG(H514):DC(G509) DG(H515):DC(G508) DC(H516):DG(G507) DA(H517):DT(G506) DT(H518):DA(G505) DG(H519):DC(G504) DC(H520):DG(G503) DC(H521):DG(G502) DT(H522):DA(G501) DA(F411):DT(E408) DG(F412):DC(E407) DG(F413):DC(E406) DC(F414):DG(E405) DA(F415):DT(E404) DT(F416):DA(E403) DG(F417):DC(E402) DC(F418):DG(E401) DC(F419):DG(E400) DT(F420):DA(E399) DG(F421):DC(E398) chainB ( 27) LYS138 0 0 0 0 0 0 0 0 0 0 0 4 17 7 0 0 0 0 0 0 0 0 (157) ARG268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (185) ALA296 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (186) CYS297 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (189) ARG300 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 13 0 0 0 0 0 0 chainD ( 26) LYS138 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) SER139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (156) ARG268 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ALA296 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) CYS297 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) ARG300 0 0 0 0 0 0 4 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hefipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnRrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq/efipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnRrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >3vd0_D:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION organism=Homo sapiens DNA sequence DC(E398):DG(F421) DA(E399):DT(F420) DG(E400):DC(F419) DG(E401):DC(F418) DC(E402):DG(F417) DA(E403):DT(F416) DT(E404):DA(F415) DG(E405):DC(F414) DC(E406):DG(F413) DC(E407):DG(F412) DT(E408):DA(F411) DA(G501):DT(H522) DG(G502):DC(H521) DG(G503):DC(H520) DC(G504):DG(H519) DA(G505):DT(H518) DT(G506):DA(H517) DG(G507):DC(H516) DC(G508):DG(H515) DC(G509):DG(H514) DT(G510):DA(H513) DG(G511):DC(H512) chainD ( 26) LYS138 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 ( 27) SER139 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (156) ARG268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (184) ALA296 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 (185) CYS297 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (188) ARG300 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 4 0 0 0 0 0 0 prot.sequence efipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnRrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >3vd0_IJ:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION organism=Homo sapiens DNA sequence DC(N398):DG(M421) DA(N399):DT(M420) DG(N400):DC(M419) DG(N401):DC(M418) DC(N402):DG(M417) DA(N403):DT(M416) DT(N404):DA(M415) DG(N405):DC(M414) DC(N406):DG(M413) DC(N407):DG(M412) DT(N408):DA(M411) DG(N409):DC(M410) chainI ( 25) LYS138 0 0 0 0 0 0 0 0 6 11 1 0 ( 26) SER139 0 0 0 0 0 0 0 0 0 0 0 2 (184) CYS297 0 0 0 0 0 0 0 0 3 0 0 0 (187) ARG300 0 0 0 0 0 0 18 14 4 0 0 0 chainJ ( 25) LYS138 0 5 4 0 0 0 0 0 0 0 0 0 ( 26) SER139 0 1 0 0 0 0 0 0 0 0 0 0 (183) ALA296 0 0 0 1 1 0 0 0 0 0 0 0 (184) CYS297 0 0 0 1 0 0 0 0 0 0 0 0 (187) ARG300 0 0 0 4 14 11 0 0 0 0 0 0 prot.sequence fipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricaCpgRdrkadedhyreq/fipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >3vd1_CD:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION organism=Homo sapiens DNA sequence DC(H512):DG(G511) DG(H513):DC(G510) DG(H514):DC(G509) DG(H515):DC(G508) DC(H516):DG(G507) DA(H517):DT(G506) DT(H518):DA(G505) DG(H519):DC(G504) DC(H520):DG(G503) DC(H521):DG(G502) DC(H522):DG(G501) DG(H523):DC(G500) chainC ( 27) LYS138 0 6 7 1 0 0 0 0 0 0 0 0 ( 28) SER139 2 0 0 0 0 0 0 0 0 0 0 0 (185) ALA296 0 0 0 1 3 0 0 0 0 0 0 0 (186) CYS297 0 0 0 1 0 0 0 0 0 0 0 0 (189) ARG300 0 0 0 4 13 11 0 0 0 0 0 0 chainD ( 25) LYS138 0 0 0 0 0 0 0 0 2 10 2 0 (155) ARG268 0 0 0 0 1 0 0 0 0 0 0 0 (183) ALA296 0 0 0 0 0 0 0 1 1 0 0 0 (184) CYS297 0 0 0 0 0 0 0 0 1 0 0 0 (187) ARG300 0 0 0 0 0 0 4 11 6 0 0 0 prot.sequence hefipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq/fipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnRrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >3vd1_IJ:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION organism=Homo sapiens DNA sequence DC(M600):DG(N623) DG(M601):DC(N622) DG(M602):DC(N621) DG(M603):DC(N620) DC(M604):DG(N619) DA(M605):DT(N618) DT(M606):DA(N617) DG(M607):DC(N616) DC(M608):DG(N615) DC(M609):DG(N614) DC(M610):DG(N613) DG(M611):DC(N612) chainI ( 25) LYS138 0 1 5 1 0 0 0 0 0 0 0 0 (183) ALA296 0 0 0 0 1 0 0 0 0 0 0 0 (184) CYS297 0 0 0 3 1 0 0 0 0 0 0 0 (187) ARG300 0 0 0 4 12 15 0 0 0 0 0 0 chainJ ( 25) LYS138 0 0 0 0 0 0 0 0 1 6 4 0 ( 26) SER139 0 0 0 0 0 0 0 0 0 0 1 0 (184) CYS297 0 0 0 0 0 0 0 0 1 0 0 0 (187) ARG300 0 0 0 0 0 0 14 10 4 0 0 0 prot.sequence fipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq/fipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricaCpgRdrkadedhyreq >3vd1_J:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION organism=Homo sapiens DNA sequence DC(N612):DG(M611) DG(N613):DC(M610) DG(N614):DC(M609) DG(N615):DC(M608) DC(N616):DG(M607) DA(N617):DT(M606) DT(N618):DA(M605) DG(N619):DC(M604) DC(N620):DG(M603) DC(N621):DG(M602) DC(N622):DG(M601) DG(N623):DC(M600) chainJ ( 25) LYS138 0 4 6 1 0 0 0 0 0 0 0 0 ( 26) SER139 0 1 0 0 0 0 0 0 0 0 0 0 (184) CYS297 0 0 0 1 0 0 0 0 0 0 0 0 (187) ARG300 0 0 0 4 10 14 0 0 0 0 0 0 prot.sequence fipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricaCpgRdrkadedhyreq >3vd1_KL:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION organism=Homo sapiens DNA sequence DC(O700):DG(P723) DG(O701):DC(P722) DG(O702):DC(P721) DG(O703):DC(P720) DC(O704):DG(P719) DA(O705):DT(P718) DT(O706):DA(P717) DG(O707):DC(P716) DC(O708):DG(P715) DC(O709):DG(P714) DC(O710):DG(P713) DG(O711):DC(P712) chainK ( 28) LYS138 0 0 0 0 0 0 0 0 0 3 5 0 (186) ALA296 0 0 0 0 0 0 0 1 0 0 0 0 (187) CYS297 0 0 0 0 0 0 0 0 3 0 0 0 (190) ARG300 0 0 0 0 0 0 15 8 7 0 0 0 chainL ( 28) LYS138 0 4 8 5 0 0 0 0 0 0 0 0 (186) ALA296 0 0 0 1 3 0 0 0 0 0 0 0 (187) CYS297 0 0 0 3 0 0 0 0 0 0 0 0 (190) ARG300 0 0 0 4 13 13 0 0 0 0 0 0 prot.sequence hhefipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq/hhefipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >3vd2_A:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION organism=Homo sapiens DNA sequence DA(E402):DT(F513) DT(E403):DA(F512) DG(E404):DC(F511) DG(E405):DC(F510) DA(E406):DT(F509) DC(E407):DG(F508) DA(E408):DT(F507) DT(E409):DA(F506) DG(E410):DC(F505) DT(E411):DA(F504) DC(E412):DG(F503) DC(E413):DG(F502) DA(E414):DT(F501) DT(E415):DA(F500) chainA ( 29) LYS138 0 0 3 4 0 0 0 0 0 0 0 0 0 0 ( 30) SER139 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (187) ALA296 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (188) CYS297 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (191) ARG300 0 0 0 0 0 12 17 0 0 0 0 0 0 0 prot.sequence hhhefipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >3vd2_BC:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION organism=Homo sapiens DNA sequence DA(E402):DT(F513) DT(E403):DA(F512) DG(E404):DC(F511) DG(E405):DC(F510) DA(E406):DT(F509) DC(E407):DG(F508) DA(E408):DT(F507) DT(E409):DA(F506) DG(E410):DC(F505) DT(E411):DA(F504) DC(E412):DG(F503) DC(E413):DG(F502) DA(E414):DT(F501) DT(E415):DA(F500) DA(G602):DT(H713) DT(G603):DA(H712) DG(G604):DC(H711) DG(G605):DC(H710) DA(G606):DT(H709) DC(G607):DG(H708) DA(G608):DT(H707) DT(G609):DA(H706) DG(G610):DC(H705) DT(G611):DA(H704) DC(G612):DG(H703) DC(G613):DG(H702) DA(G614):DT(H701) DT(G615):DA(H700) chainB ( 27) LYS138 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER139 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ALA296 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) CYS297 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) ARG300 0 0 0 0 0 0 0 4 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) LYS138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 2 0 0 0 0 0 0 0 0 0 ( 30) SER139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (187) ALA296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (188) CYS297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (191) ARG300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 0 prot.sequence hefipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyre/hhhefipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >3vd2_IJ:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION organism=Homo sapiens DNA sequence DT(L801):DA(K914) DG(L802):DC(K913) DG(L803):DC(K912) DA(L804):DT(K911) DC(L805):DG(K910) DA(L806):DT(K909) DT(L807):DA(K908) DG(L808):DC(K907) DT(L809):DA(K906) DC(L810):DG(K905) DC(L811):DG(K904) DA(L812):DT(K903) DT(L813):DA(K902) chainI ( 28) LYS138 0 0 6 0 0 0 0 0 0 0 0 0 0 (186) ALA296 0 0 0 1 1 0 0 0 0 0 0 0 0 (187) CYS297 0 0 0 2 2 0 0 0 0 0 0 0 0 (190) ARG300 0 0 0 1 13 23 0 0 0 0 0 0 0 chainJ ( 28) LYS138 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 29) SER139 0 0 0 0 0 0 0 0 0 0 4 1 0 (186) ALA296 0 0 0 0 0 0 0 0 3 1 0 0 0 (187) CYS297 0 0 0 0 0 0 0 0 2 2 0 0 0 (190) ARG300 0 0 0 0 0 0 0 14 3 0 0 0 0 prot.sequence hhefipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq/hhefipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >3vd6_C:Glucocorticoid_receptor-like_DNA-binding_domain; title=BOTH ZN FINGERS OF GATA1 BOUND TO PALINDROMIC DNA RECOGNITION SITE, P21 CRYSTAL FORM organism=Mus musculus DNA sequence DG(B23):DC(A20) DA(B24):DT(A19) DG(B25):DC(A18) DT(B26):DA(A17) DC(B27):DG(A16) DC(B28):DG(A15) DA(B29):DT(A14) DT(B30):DA(A13) DC(B31):DG(A12) DT(B32):DA(A11) DG(B33):DC(A10) DA(B34):DT(A9) DT(B35):DA(A8) DA(B36):DT(A7) DA(B37):DT(A6) DG(B38):DC(A5) DA(B39):DT(A4) DC(B40):DG(A3) chainC ( 13) PRO213 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 14) LEU214 0 0 0 0 0 0 0 2 2 4 3 0 0 0 0 0 0 0 ( 16) ARG216 0 0 0 0 0 0 0 4 11 2 0 0 0 0 0 0 0 0 ( 26) ASN226 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 ( 30) LEU230 0 0 0 0 0 5 2 1 0 0 0 0 0 0 0 0 0 0 ( 53) THR267 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 54) LEU268 0 0 0 0 0 0 0 0 2 8 2 3 0 0 0 0 0 0 ( 56) ARG270 0 0 0 0 0 0 0 0 0 7 11 4 0 0 0 0 0 0 ( 66) ASN280 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 ( 70) LEU284 0 0 0 0 0 0 0 0 0 0 0 3 4 6 0 0 0 0 ( 74) LEU288 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 91) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 9 8 14 0 0 0 ( 93) ARG307 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 prot.sequence arecvncgatatPLwRrdrtghylcNacgLyhkmngqnrpltqctncqttttTLwRrnasgdpvcNacgLyfkLhqvnrpltmrkdgiqtRnRkas >3vea_A:Ribbon-helix-helix; title=CRYSTAL STRUCTURE OF MATP-MATS23MER organism=Yersinia pestis DNA sequence DA(M1):DT(N23) DG(M2):DC(N22) DT(M3):DA(N21) DT(M4):DA(N20) DC(M5):DG(N19) DG(M6):DC(N18) DT(M7):DA(N17) DG(M8):DC(N16) DA(M9):DT(N15) DC(M10):DG(N14) DA(M11):DT(N13) DA(M12):DT(N12) DT(M13):DA(N11) DG(M14):DC(N10) DT(M15):DA(N9) DC(M16):DG(N8) DA(M17):DT(N7) DC(M18):DG(N6) DG(M19):DC(N5) DA(M20):DT(N4) DA(M21):DT(N3) DC(M22):DG(N2) DT(M23):DA(N1) chainA ( 72) GLN85 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR86 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG88 0 0 0 0 18 17 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA89 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LYS92 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG93 0 0 0 0 0 0 0 0 3 13 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) SER106 0 0 0 0 0 0 0 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 0 ( 95) ASP108 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 prot.sequence mkyqqlenlesgwkwaylvkkhregeaitrhiensaaqdaveqlmklenepvkvqewidahmnvnlatrmkQTiRArrKRhfnaehqhtrkkSiDleflvwqrlavlarrrgntlsdtvvqliedaerkekyasqmsslkqdlkdildk >3vea_AB:Ribbon-helix-helix; title=CRYSTAL STRUCTURE OF MATP-MATS23MER organism=Yersinia pestis DNA sequence DA(M1):DT(N23) DG(M2):DC(N22) DT(M3):DA(N21) DT(M4):DA(N20) DC(M5):DG(N19) DG(M6):DC(N18) DT(M7):DA(N17) DG(M8):DC(N16) DA(M9):DT(N15) DC(M10):DG(N14) DA(M11):DT(N13) DA(M12):DT(N12) DT(M13):DA(N11) DG(M14):DC(N10) DT(M15):DA(N9) DC(M16):DG(N8) DA(M17):DT(N7) DC(M18):DG(N6) DG(M19):DC(N5) DA(M20):DT(N4) DA(M21):DT(N3) DC(M22):DG(N2) DT(M23):DA(N1) chainB ( 72) GLN85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 73) THR86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 75) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 16 16 0 0 0 0 ( 76) ALA89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 79) LYS92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 80) ARG93 0 0 0 0 0 0 0 0 0 0 0 0 12 10 2 0 0 0 0 0 0 0 0 ( 93) SER106 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 ( 95) ASP108 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 72) GLN85 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR86 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG88 0 0 0 0 18 17 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA89 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LYS92 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG93 0 0 0 0 0 0 0 0 3 13 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) SER106 0 0 0 0 0 0 0 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 0 ( 95) ASP108 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 prot.sequence mkyqqlenlesgwkwaylvkkhregeaitrhiensaaqdaveqlmklenepvkvqewidahmnvnlatrmkQTiRArrKRhfnaehqhtrkkSiDleflvwqrlavlarrrgntlsdtvvqliedaerkekyasqmsslkqdlkdildk/mkyqqlenlesgwkwaylvkkhregeaitrhiensaaqdaveqlmklenepvkvqewidahmnvnlatrmkQTiRArrKRhfnaehqhtrkkSiDleflvwqrlavlarrrgntlsdtvvqliedaerkekyasqmsslkqdlkdildk >3veb_AB:Ribbon-helix-helix; title=CRYSTAL STRUCTURE OF MATP-MATS organism=Yersinia pestis DNA sequence DC(N2):DG(M16) DG(N3):DC(M15) DT(N4):DA(M14) DG(N5):DC(M13) DA(N6):DT(M12) DC(N7):DG(M11) DA(N8):DT(M10) DT(N9):DA(M9) DT(N10):DA(M8) DG(N11):DC(M7) DT(N12):DA(M6) DC(N13):DG(M5) DA(N14):DT(M4) DC(N15):DG(M3) DG(N16):DC(M2) chainB ( 72) GLN85 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG88 17 18 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA89 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 79) LYS92 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG93 0 0 0 0 2 14 17 0 0 0 0 0 0 0 0 ( 91) LYS104 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 93) SER106 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 95) ASP108 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 chainA ( 70) LYS84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 71) GLN85 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 74) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 9 21 21 ( 75) ALA89 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 78) LYS92 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 79) ARG93 0 0 0 0 0 0 0 0 9 12 5 0 0 0 0 ( 92) SER106 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 94) ASP108 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 prot.sequence kyqqlenlesgwkwaylvkkhregeaitrhiensaaqdaveqlmklenepvkvqewidahmnvnlatrmKQtiRArrKRhfnaehqhtrkkSiDleflvwqrlavlarrrgntlsdtvvqliedaerkekyasqmsslkqdlkdil/mkyqqlenlesgwkwaylvkkhregeaitrhiensaaqdaveqlmklenepvkvqewidahmnvnlatrmkQtiRArrKRhfnaehqhtrKkSiDleflvwqrlavlarrrgntlsdtvvqliedaerkekyasqmsslkqdlkdildke >3veb_B:Ribbon-helix-helix; title=CRYSTAL STRUCTURE OF MATP-MATS organism=Yersinia pestis DNA sequence DC(M2):DG(N16) DG(M3):DC(N15) DT(M4):DA(N14) DG(M5):DC(N13) DA(M6):DT(N12) DC(M7):DG(N11) DA(M8):DT(N10) DA(M9):DT(N9) DT(M10):DA(N8) DG(M11):DC(N7) DT(M12):DA(N6) DC(M13):DG(N5) DA(M14):DT(N4) DC(M15):DG(N3) DG(M16):DC(N2) chainB ( 72) GLN85 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 ( 75) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 6 18 17 ( 76) ALA89 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 79) LYS92 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 80) ARG93 0 0 0 0 0 0 0 0 17 14 2 0 0 0 0 ( 91) LYS104 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 93) SER106 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 95) ASP108 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 prot.sequence mkyqqlenlesgwkwaylvkkhregeaitrhiensaaqdaveqlmklenepvkvqewidahmnvnlatrmkQtiRArrKRhfnaehqhtrKkSiDleflvwqrlavlarrrgntlsdtvvqliedaerkekyasqmsslkqdlkdildke >3vek_C:Glucocorticoid_receptor-like_DNA-binding_domain; title=BOTH ZN FINGERS OF GATA1 BOUND TO PALINDROMIC DNA RECOGNITION SITE, P1 CRYSTAL FORM organism=Mus musculus DNA sequence DG(A3):DC(B40) DT(A4):DA(B39) DC(A5):DG(B38) DT(A6):DA(B37) DT(A7):DA(B36) DA(A8):DT(B35) DT(A9):DA(B34) DC(A10):DG(B33) DA(A11):DT(B32) DG(A12):DC(B31) DA(A13):DT(B30) DT(A14):DA(B29) DG(A15):DC(B28) DG(A16):DC(B27) DA(A17):DT(B26) DC(A18):DG(B25) DT(A19):DA(B24) DC(A20):DG(B23) chainC ( 13) PRO213 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 14) LEU214 0 0 0 0 0 0 0 3 5 2 3 0 0 0 0 0 0 0 ( 16) ARG216 0 0 0 0 0 0 0 0 4 11 4 0 0 0 0 0 0 0 ( 26) ASN226 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 ( 30) LEU230 0 0 0 0 0 0 0 0 0 0 1 2 4 0 0 0 0 0 ( 53) THR267 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU268 0 0 0 0 0 0 3 2 8 2 0 0 0 0 0 0 0 0 ( 56) ARG270 0 0 0 0 0 0 4 13 8 0 0 0 0 0 0 0 0 0 ( 66) ASN280 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 ( 70) LEU284 0 0 0 0 6 2 3 0 0 0 0 0 0 0 0 0 0 0 ( 73) LYS287 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 74) LEU288 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ARG305 0 0 0 12 8 14 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG307 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence arecvncgatatPLwRrdrtghylcNacgLyhkmngqnrpltqctncqttttTLwRrnasgdpvcNacgLyfKLhqvnrpltmrkdgiqtRnRkas >3vh0_A:C-terminal_heme_d1_domain_of_cytochrome_cd1-nitrite_reductase; title=CRYSTAL STRUCTURE OF E. COLI YNCE COMPLEXED WITH DNA organism=Escherichia coli DNA sequence DC(F1):DG(E11) DG(F2):DA(E10) DG(F3):DT(E8) DG(F4):DC(E7) DT(F5):DA(E6) DA(F6):DT(E5) DC(F7):DG(E4) DT(F8):DG(E3) DA(F10):DG(E2) DG(F11):DC(E1) chainA (108) ARG139 0 0 0 0 0 0 0 0 2 13 (113) ARG144 0 0 0 0 0 0 0 0 0 8 (129) ILE160 0 0 0 0 0 0 0 0 0 1 (155) MET186 0 0 0 0 0 0 0 0 0 23 (201) PHE232 0 0 0 0 0 0 0 0 0 15 (203) ILE234 0 0 0 0 0 0 0 0 0 3 prot.sequence eemlrkavgkgayemaysqqenalwlatsqsrkldkggvvyrldpvtlevtqaihndlkpfgatinnttqtlwfgntvnsavtaidaktgevkgrlvlddrkrteevRplqpRelvaddatntvyisgIgkesviwvvdggniklktaiqntgkMstglaldsegkrlyttnadgelitidtadnkilsrkkllddgkehFfInisldtarqrafitdskaaevlvvdtrngnilakvaapeslavlfnparneayvthrqagkvsvidaksykvvktfdtpthpnslalsadgktlyvsvkqkstkqqeatqpddvirial >3vh0_AD:C-terminal_heme_d1_domain_of_cytochrome_cd1-nitrite_reductase; title=CRYSTAL STRUCTURE OF E. COLI YNCE COMPLEXED WITH DNA organism=Escherichia coli DNA sequence DC(F1):DG(E11) DG(F2):DA(E10) DG(F3):DT(E8) DG(F4):DC(E7) DT(F5):DA(E6) DA(F6):DT(E5) DC(F7):DG(E4) DT(F8):DG(E3) DA(F10):DG(E2) DG(F11):DC(E1) chainA (108) ARG139 0 0 0 0 0 0 0 0 2 13 (113) ARG144 0 0 0 0 0 0 0 0 0 8 (129) ILE160 0 0 0 0 0 0 0 0 0 1 (155) MET186 0 0 0 0 0 0 0 0 0 23 (201) PHE232 0 0 0 0 0 0 0 0 0 15 (203) ILE234 0 0 0 0 0 0 0 0 0 3 chainD (108) ARG139 13 1 0 0 0 0 0 0 0 0 (113) ARG144 8 0 0 0 0 0 0 0 0 0 (129) ILE160 1 0 0 0 0 0 0 0 0 0 (155) MET186 23 0 0 0 0 0 0 0 0 0 (201) PHE232 15 0 0 0 0 0 0 0 0 0 (203) ILE234 3 0 0 0 0 0 0 0 0 0 prot.sequence eemlrkavgkgayemaysqqenalwlatsqsrkldkggvvyrldpvtlevtqaihndlkpfgatinnttqtlwfgntvnsavtaidaktgevkgrlvlddrkrteevRplqpRelvaddatntvyisgIgkesviwvvdggniklktaiqntgkMstglaldsegkrlyttnadgelitidtadnkilsrkkllddgkehFfInisldtarqrafitdskaaevlvvdtrngnilakvaapeslavlfnparneayvthrqagkvsvidaksykvvktfdtpthpnslalsadgktlyvsvkqkstkqqeatqpddvirial/eemlrkavgkgayemaysqqenalwlatsqsrkldkggvvyrldpvtlevtqaihndlkpfgatinnttqtlwfgntvnsavtaidaktgevkgrlvlddrkrteevRplqpRelvaddatntvyisgIgkesviwvvdggniklktaiqntgkMstglaldsegkrlyttnadgelitidtadnkilsrkkllddgkehFfInisldtarqrafitdskaaevlvvdtrngnilakvaapeslavlfnparneayvthrqagkvsvidaksykvvktfdtpthpnslalsadgktlyvsvkqkstkqqeatqpddvirial >3vk7_B:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain; title=CRYSTAL STRUCTURE OF DNA-GLYCOSYLASE BOUND TO DNA CONTAINING 5- HYDROXYURACIL organism=Acanthamoeba polyphaga mimivirus DNA sequence DC(F14):DG(E13) DG(F15):DC(E12) DT(F16):DA(E11) DC(F17):DG(E10) DC(F18):DG(E9) DA(F19):DT(E8) DG(F21):DG(E7) DT(F22):DC(E6) DC(F23):DA(E5) DT(F24):DG(E4) DA(F25):DA(E3) DC(F26):DT(E2) chainB ( 83) LEU84 0 0 0 0 0 0 15 0 0 0 0 0 (112) MET113 0 0 0 0 0 2 0 0 0 0 0 0 (113) ARG114 0 0 0 0 0 40 15 1 0 0 0 0 (115) PHE116 0 0 0 0 0 0 30 24 0 0 0 0 (271) SER272 0 0 0 0 0 0 0 0 0 0 5 10 (273) LYS274 0 0 0 0 0 0 0 0 3 6 0 0 (274) ASN275 0 0 0 0 0 0 0 2 4 6 2 0 (276) ARG277 0 0 0 0 0 0 2 3 0 0 0 0 prot.sequence pqgpevaltadilekyfkgktleyidfisgrysksepegyddfianlplkvsnvdtkgkflwfelfdpndksnkwyiwntfgLtgmwslfeakytravlsfdnelmayfsdMRnFgtfkfsnsekelkrklnelgpdflknddidiskikkykqpivallmdqkkigsglgnylvaeilyrakidphklgsnltdqeienlwywikyetklaydsnhigymvnlenesskigrknyhpnihptekefdflvyrkkkdpngnkviadkiigSgKNkRttywapaiqk >3vk8_B:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain; title=CRYSTAL STRUCTURE OF DNA-GLYCOSYLASE BOUND TO DNA CONTAINING THYMINE GLYCOL organism=Acanthamoeba polyphaga mimivirus DNA sequence DG(E1):DC(F26) DT(E2):DA(F25) DA(E3):DT(F24) DG(E4):DC(F23) DA(E5):DT(F22) DC(E6):DG(F21) DC(E7):CTG(F20) DT(E8):DA(F19) DG(E9):DC(F18) DG(E10):DC(F17) DA(E11):DT(F16) DC(E12):DG(F15) DG(E13):DC(F14) chainB ( 1) PRO2 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 2) GLN3 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 5) GLU6 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 83) LEU84 0 0 0 0 0 28 0 0 0 0 0 0 0 (112) MET113 0 0 0 0 0 0 0 3 0 0 0 0 0 (113) ARG114 0 0 0 0 0 0 14 42 0 0 0 0 0 (115) PHE116 0 0 0 0 0 94 11 0 0 0 0 0 0 (173) TYR174 0 0 0 0 0 0 12 0 0 0 0 0 0 (220) TYR221 0 0 0 0 0 0 4 0 0 0 0 0 0 (249) PHE250 0 0 0 0 0 0 1 0 0 0 0 0 0 (252) TYR253 0 0 0 0 0 0 1 0 0 0 0 0 0 (271) SER272 0 10 7 0 0 0 0 0 0 0 0 0 0 (273) LYS274 0 0 0 5 6 0 0 0 0 0 0 0 0 (274) ASN275 0 0 2 8 3 0 0 0 0 0 0 0 0 (276) ARG277 0 0 0 0 3 6 0 0 0 0 0 0 0 prot.sequence pqgpevaltadilekyfkgktleyidfisgRysksepegyddfianlplkvsnvdtkgkflwfelfdpndksnkwyiwntfgLtgmwslfeakytravlsfdnelmayfsdMRnFgtfkfsnsekelkrklnelgpdflknddidiskikkykqpivallmdqkkigsglgnylvaeilyrakidphklgsnltdqeienlwywikyetklaydsnhigymvnlenesskigrknyhpnihptekefdflvyrkkkdpngnkviadkiigSgKNkRttywapaiqkle >3vok_A:Homeodomain-like; title=X-RAY CRYSTAL STRUCTURE OF WILD TYPE HRTR IN THE APO FORM WITH THE TARGET DNA. organism=Lactococcus lactis DNA sequence DA(U1) DT(U2) DG(U3) DA(U4) DC(U5) DA(U6) DC(U7) DT(U8) DG(U9) DT(U10) DG(U11) DT(U12) DC(U13) DA(U14) DT(U15) chainA ( 50) GLN51 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pkstyfslsdekrnrvydaclnefqthsfheakimhivkaldiprgsfyQyfedlkdayfyvlsqetleihdlffnllkdnsieesldkykylllenlidspqyklykyrfldwtyelerdwkdnpisqvlksvvhnlvyrlfsenwtektfienydkeiklvtegllnyitdrkn >3vw3_H:Immunoglobulin; title=ANTIBODY 64M-5 FAB IN COMPLEX WITH A DOUBLE-STRANDED DNA (6-4) PHOTOPRODUCT organism=MUS MUSCULUS DNA sequence DC(B2):DG(A18) DC(B3):DG(A17) DG(B4):DC(A16) DT(B5):DA(A15) DC(B6):DG(A14) DC(B7):DG(A13) DA(B8):DT(A12) DT(B9):DA(A11) DA(B10):5PY(A10) DA(B11):64T(A9) DT(B12):DA(A8) DC(B13):DG(A7) DA(B14):DT(A6) DC(B15):DG(A5) DT(B16):DA(A4) DC(B17):DG(A3) DG(B18):DC(A2) chainH ( 33) TRP33 0 0 0 0 0 0 0 0 33 2 0 0 0 0 0 0 0 ( 35) HIS35 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 99) ARG95 0 0 0 0 0 0 0 0 10 15 0 0 0 0 0 0 0 (101) TYR97 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (105) TYR100I 0 0 0 0 0 0 0 0 0 6 48 0 0 0 0 0 0 prot.sequence evqlqqsgtvlarpgasvkmsckasgytftnywmhwikqrpgqglewigtiypgnsdttysqkfkgkakltavtststaymelssltnedsavyycsrrnygssyaMdywgqgtsvtvssakttppsvyplapgsaaqtsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtstwpsetvtcnvahpasstkvdkkivpr >3vw3_HL:Immunoglobulin; title=ANTIBODY 64M-5 FAB IN COMPLEX WITH A DOUBLE-STRANDED DNA (6-4) PHOTOPRODUCT organism=MUS MUSCULUS DNA sequence DC(A2):DG(B18) DG(A3):DC(B17) DA(A4):DT(B16) DG(A5):DC(B15) DT(A6):DA(B14) DG(A7):DC(B13) DA(A8):DT(B12) 64T(A9):DA(B11) 5PY(A10):DA(B10) DA(A11):DT(B9) DT(A12):DA(B8) DG(A13):DC(B7) DG(A14):DC(B6) DA(A15):DT(B5) DC(A16):DG(B4) DG(A17):DC(B3) DG(A18):DC(B2) chainL ( 26) GLN27 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 ( 27) ASN27A 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 29) VAL27C 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 ( 32) ASN28 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 ( 34) TYR30 0 0 0 0 0 0 49 3 0 0 0 0 0 0 0 0 0 ( 36) TYR32 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 ( 54) THR50 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 71) SER67 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 97) HIS93 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 chainH ( 33) TRP33 0 0 0 0 0 0 0 2 33 0 0 0 0 0 0 0 0 ( 35) HIS35 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 99) ARG95 0 0 0 0 0 0 0 15 10 0 0 0 0 0 0 0 0 (101) TYR97 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (105) TYR100I 0 0 0 0 0 0 48 6 0 0 0 0 0 0 0 0 0 prot.sequence evqlqqsgtvlarpgasvkmsckasgytftnywmhwikqrpgqglewigtiypgnsdttysqkfkgkakltavtststaymelssltnedsavyycsrrnygssyaMdywgqgtsvtvssakttppsvyplapgsaaqtsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtstwpsetvtcnvahpasstkvdkkivpr/vlmtqtplslpvslgdqasiscrssqnivhSNgYtYlewylqkpgqspklliyTvsnrfsgvpdrfsgsgSgtdftlkisrveaedlgvyycfrgsHvptfgggtkleikradaaptvsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltltkdeyerhnsytceathktstspivksfnrn >3vw3_L:Immunoglobulin; title=ANTIBODY 64M-5 FAB IN COMPLEX WITH A DOUBLE-STRANDED DNA (6-4) PHOTOPRODUCT organism=MUS MUSCULUS DNA sequence DC(B2):DG(A18) DC(B3):DG(A17) DG(B4):DC(A16) DT(B5):DA(A15) DC(B6):DG(A14) DC(B7):DG(A13) DA(B8):DT(A12) DT(B9):DA(A11) DA(B10):5PY(A10) DA(B11):64T(A9) DT(B12):DA(A8) DC(B13):DG(A7) DA(B14):DT(A6) DC(B15):DG(A5) DT(B16):DA(A4) DC(B17):DG(A3) DG(B18):DC(A2) chainL ( 26) GLN27 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 ( 27) ASN27A 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 29) VAL27C 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 ( 32) ASN28 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 34) TYR30 0 0 0 0 0 0 0 0 0 3 49 0 0 0 0 0 0 ( 36) TYR32 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 ( 54) THR50 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 71) SER67 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 97) HIS93 0 0 0 0 0 0 0 82 0 0 0 0 0 0 0 0 0 prot.sequence vlmtqtplslpvslgdqasiscrssqnivhSNgYtYlewylqkpgqspklliyTvsnrfsgvpdrfsgsgSgtdftlkisrveaedlgvyycfrgsHvptfgggtkleikradaaptvsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltltkdeyerhnsytceathktstspivksfnrn >3vw4_A: title=CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF COLE2-P9 REP IN COMPLEX WITH THE REPLICATION ORIGIN organism=ESCHERICHIA COLI DNA sequence DA(D16):DT(C22) DA(D17):DT(C21) DG(D18):DC(C20) DG(D19):DC(C19) DC(D20):DG(C18) DT(D21):DA(C17) DT(D22):DA(C16) DA(D23):DT(C15) DT(D24):DA(C14) DC(D25):DG(C13) DT(D26):DA(C12) DG(D27):DC(C11) DG(D28):DC(C10) DT(D29):DA(C9) DC(D30):DG(C8) DT(D31):DA(C7) DC(D32):DG(C6) chainA ( 16) LYS185 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG189 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) TRP195 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) PHE240 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) PHE245 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) VAL248 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) GLN249 0 0 10 19 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG252 0 2 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) SER260 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 ( 93) ARG262 0 0 0 0 0 0 2 8 4 1 0 0 0 0 0 0 0 (101) ARG270 0 0 0 0 0 0 0 0 0 0 20 10 6 0 0 0 0 (112) SER281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (113) ARG282 0 0 0 0 0 0 0 0 0 0 0 3 12 1 0 0 0 (114) ALA283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 2 (117) TYR286 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (118) ARG287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 9 prot.sequence hhhhhrnyhlfekvrKwayRairqgWpvfsqwldaviqrvemynaslpvplspaecraigksiakythrkFspegFsaVQaaRgrkggtkSkRaavptsaRslkpwealgiSRAtyYRklkc >3vwb_A:KorB_DNA-binding_domain-like; title=CRYSTAL STRUCTURE OF VIRB CORE DOMAIN (SE-MET DERIVATIVE) COMPLEXED WITH THE CIS-ACTING SITE (5-BRU MODIFICATIONS) UPSTREAM ICSB PROMOTER organism=Shigella flexneri 2a DNA sequence DG(B4):DC(C26) DT(B5):DA(C25) DG(B6):DC(C24) DG(B7):DC(C23) DG(B8):DC(C22) DA(B9):BRU(C21) DT(B10):DA(C20) DT(B11):DA(C19) DT(B12):DA(C18) DC(B13):DG(C17) DA(B14):DT(C16) DT(B15):DA(C15) DG(B16):DC(C14) DA(B17):DT(C13) DT(B18):DA(C12) DG(B19):DC(C11) DA(B20):DT(C10) DA(B21):DT(C9) DA(B22):DT(C8) DC(B23):DG(C7) DG(B24):DC(C6) DA(B25):BRU(C5) DG(B26):DC(C4) chainA ( 31) SER161 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG162 0 0 0 0 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA163 0 0 0 0 0 0 0 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR166 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG167 0 0 0 0 0 0 0 1 6 14 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PHE190 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ehsirelgiglnflkvsgmsykdiakkenlSRAkvTRafqaasvpqeiislfpiaselnFndykilfnyykglekaneslsstlpilkeeikdldtnlppdiykkeilniikkskn >3vxv_A:DNA-binding_domain; title=CRYSTAL STRUCTURE OF METHYL CPG BINDING DOMAIN OF MBD4 IN COMPLEX WITH THE 5MCG/TG SEQUENCE organism=Mus musculus DNA sequence DG(C1):DC(B13) DT(C2):DA(B12) DC(C3):DG(B11) DT(C4):DG(B10) DG(C5):5CM(B9) DG(C6):DC(B8) DT(C7):DA(B7) DA(C8):DT(B6) DG(C9):DC(B5) DT(C10):DA(B4) DG(C11):DC(B3) DA(C12):DT(B2) DC(C13):DG(B1) chainA ( 14) ARG84 0 0 0 29 13 0 0 0 0 0 0 0 0 ( 19) THR89 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 22) LYS92 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 24) ASP94 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 34) LYS104 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG106 0 0 4 15 19 0 0 0 0 0 0 0 0 prot.sequence kpvpcgwervvkqRlsgkTagKfDvyfispqglKfRskrslanyllkngetflkpedfnftvlpk >3vxx_A:DNA-binding_domain; title=CRYSTAL STRUCTURE OF METHYL CPG BINDING DOMAIN OF MBD4 IN COMPLEX WITH THE 5MCG/5MCG SEQUENCE organism=Mus musculus DNA sequence DG(B1):DC(C13) DT(B2):DA(C12) DC(B3):DG(C11) DA(B4):DT(C10) DC(B5):DG(C9) DT(B6):DA(C8) DA(B7):DT(C7) DC(B8):DG(C6) 5CM(B9):DG(C5) DG(B10):5CM(C4) DG(B11):DC(C3) DA(B12):DT(C2) DC(B13):DG(C1) chainA ( 13) ARG84 0 0 0 0 0 0 0 0 13 19 0 0 0 ( 18) THR89 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 21) LYS92 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 23) ASP94 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 33) LYS104 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 35) ARG106 0 0 0 0 0 0 0 0 17 12 2 0 0 prot.sequence pvpcgwervvkqRlsgkTagKfdvyfispqglKfRskrslanyllkngetflkpedfnftvlp >3vyb_A:DNA-binding_domain; title=CRYSTAL STRUCTURE OF METHYL CPG BINDING DOMAIN OF MBD4 IN COMPLEX WITH THE 5MCG/HMCG SEQUENCE organism=Mus musculus DNA sequence DG(C1):DC(B13) DT(C2):DA(B12) DC(C3):DG(B11) DG(C5):DG(B10) DG(C6):DC(B8) DT(C7):DA(B7) DA(C8):DT(B6) DG(C9):DC(B5) DT(C10):DA(B4) DG(C11):DC(B3) DA(C12):DT(B2) DC(C13):DG(B1) chainA ( 13) ARG84 0 0 0 13 0 0 0 0 0 0 0 0 ( 18) THR89 0 0 0 2 0 0 0 0 0 0 0 0 ( 21) LYS92 0 0 0 0 0 0 2 0 0 0 0 0 ( 33) LYS104 0 1 0 0 0 0 0 0 0 0 0 0 ( 35) ARG106 0 0 4 11 0 0 0 0 0 0 0 0 prot.sequence pvpcgwervvkqRlsgkTagKfdvyfispqglKfRskrslanyllkngetflkpedfnftvlp >3vyq_A:DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE METHYL CPG BINDING DOMAIN OF MBD4 IN COMPLEX WITH THE 5MCG/TG SEQUENCE IN SPACE GROUP P1 organism=Mus musculus DNA sequence DC(C2):DG(B10) DA(C3):DT(B9) DC(C4):DG(B8) DT(C5):DG(B7) DG(C6):5CM(B6) DG(C7):DC(B5) DA(C8):DT(B4) DT(C9):DA(B3) DG(C10):DC(B2) chainA ( 15) ARG84 0 0 0 20 12 2 0 0 0 ( 20) THR89 0 0 0 0 4 0 0 0 0 ( 23) LYS92 0 0 0 0 0 2 0 0 0 ( 25) ASP94 0 0 0 2 0 0 0 0 0 ( 37) ARG106 0 0 5 17 27 0 0 0 0 prot.sequence hkpvpcgwervvkqRlsgkTagKfDvyfispqglkfRskrslanyllkngetflkpedfnftv >3w2a_A:KorB_DNA-binding_domain-like; title=CRYSTAL STRUCTURE OF VIRB CORE DOMAIN COMPLEXED WITH THE CIS-ACTING SITE UPSTREAM ICSP PROMOTER organism=Shigella flexneri 2a DNA sequence DG(C3):DC(B26) DA(C4):DT(B25) DT(C5):DA(B24) DT(C6):DA(B23) DT(C7):DA(B22) DC(C8):DG(B21) DA(C9):DT(B20) DG(C10):DC(B19) DT(C11):DA(B18) DA(C12):DT(B17) DT(C13):DA(B16) DG(C14):DC(B15) DA(C15):DT(B14) DA(C16):DT(B13) DA(C17):DT(B12) DT(C18):DA(B11) DG(C19):DC(B10) DA(C20):DT(B9) DA(C21):DT(B8) DG(C22):DC(B7) DT(C23):DA(B6) DA(C24):DT(B5) DT(C25):DA(B4) chainA ( 30) ARG162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 ( 31) ALA163 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 34) THR166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 35) ARG167 0 0 0 0 0 0 0 0 0 0 10 12 4 0 0 0 0 0 0 0 0 0 0 prot.sequence sirelgiglnflkvsgmsykdiakkenlsRAkvTRafqaasvpqeiislfpiaselnfndykilfnyykglekaneslsstlpilkeeikdldtnlppdiykkeilniikkskn >3w3c_A:KorB_DNA-binding_domain-like; title=CRYSTAL STRUCTURE OF VIRB CORE DOMAIN COMPLEXED WITH THE CIS-ACTING SITE UPSTREAM ICSB PROMOTER organism=Shigella flexneri 2a DNA sequence DG(B4):DC(C26) DT(B5):DA(C25) DG(B6):DC(C24) DG(B7):DC(C23) DG(B8):DC(C22) DA(B9):DT(C21) DT(B10):DA(C20) DT(B11):DA(C19) DT(B12):DA(C18) DC(B13):DG(C17) DA(B14):DT(C16) DT(B15):DA(C15) DG(B16):DC(C14) DA(B17):DT(C13) DT(B18):DA(C12) DG(B19):DC(C11) DA(B20):DT(C10) DA(B21):DT(C9) DA(B22):DT(C8) DC(B23):DG(C7) DG(B24):DC(C6) DA(B25):DT(C5) DG(B26):DC(C4) chainA ( 31) SER161 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG162 0 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA163 0 0 0 0 0 0 0 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR166 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG167 0 0 0 0 0 0 0 1 2 10 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PHE190 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ehsirelgiglnflkvsgmsykdiakkenlSRAkvTRafqaasvpqeiislfpiaselnFndykilfnyykglekaneslsstlpilkeeikdldtnlppdiykkeilniikkskn >3w6v_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF ADPA, THE GLOBAL TRANSCRIPTIONAL FACTOR, IN COMPLEX WITH A TARGET DNA organism=STREPTOMYCES GRISEUS DNA sequence DG(B-1):DC(C12) DT(B0):DA(C11) DG(B1):DC(C10) DA(B2):DT(C9) DA(B3):DT(C8) DC(B4):DG(C7) DC(B5):DG(C6) DC(B6):DG(C5) DG(B7):DC(C4) DC(B8):DG(C3) DC(B9):DG(C2) DA(B10):DT(C1) DA(B11):DT(C0) DC(B12):DG(C-1) chainA ( 31) SER260 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 32) ARG261 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 33) ARG262 0 0 0 0 0 0 0 15 17 10 6 0 0 0 ( 34) THR263 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 36) ASP265 0 0 0 0 0 0 3 1 0 0 0 0 0 0 ( 37) ARG266 0 0 0 0 0 0 0 0 0 0 12 15 0 0 prot.sequence sdplaevvawalehlheqfdvetlaaraymSRRTfDRrfrsltgsaplqwlitqrvlqaqrlletsdysvdevagrcgfrspvalrghfrrqlgsspaayraayrarrpqg >3w96_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE LACKING H2A N- TERMINAL REGION organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 1) HIS39 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 20) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 66) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence HRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/iqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/trssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreIqtavrlllpgelakhavsegtkavtkyts >3w96_D:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE LACKING H2A N- TERMINAL REGION organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainD ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3w97_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE LACKING H2B N- TERMINAL REGION organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 65) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) LYS37 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) HIS39 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/KpHrYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreIqtavrlllpgelakhavsegtkavtkytsa >3w97_E:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE LACKING H2B N- TERMINAL REGION organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainE ( 1) LYS37 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) HIS39 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KpHrYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >3w98_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE LACKING H3.1 N- TERMINAL REGION organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/KrsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkVLRdniqgitkpairrlarrggvkriSgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiQtavrlllpgelakhavsegtkavtkyts >3w99_ABCDEFGH:Histone-fold;PH_domain-like; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE LACKING H4 N- TERMINAL REGION organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 26) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/rssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskAmgimnsfvndiferiageasrlahynkrstitsrEiqtavrlllpgelakhavsegtkavtkytsa >3w99_F:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE LACKING H4 N- TERMINAL REGION organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >3wa9_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE NUCLEOSOME CONTAINING HUMAN H2A.Z.1 organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 31) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kavsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksligk/srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/vsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkRitprhlqlairgdeeldslikatiagggviphihksligk/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3wa9_D:Histone-fold; title=THE NUCLEOSOME CONTAINING HUMAN H2A.Z.1 organism=? DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3waa_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE NUCLEOSOME CONTAINING HUMAN H2A.Z.2 organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 32) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 9) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) LYS37 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akavsrsqraglqfpvgrihrhlktrttshgRvgataavysaaileyltaevlelagnaskdlkvkRitprhlqlairgdeeldslikatiagggviphihksligk/rsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/KpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/vsrsqraglqfpvgrihrhlktrttshgRvgataavysaaileyltaevlelagnaskdlkvkRitprhlqlairgdeeldslikatiagggviphihksligk/rkesysiyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqTavrlllpgelakhavsegtkavtkytsa >3waa_C:Histone-fold; title=THE NUCLEOSOME CONTAINING HUMAN H2A.Z.2 organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainC ( 32) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence akavsrsqraglqfpvgrihrhlktrttshgRvgataavysaaileyltaevlelagnaskdlkvkRitprhlqlairgdeeldslikatiagggviphihksligk >3waz_AB:Transglycosidases; title=CRYSTAL STRUCTURE OF A RESTRICTION ENZYME PABI IN COMPLEX WITH DNA organism=Pyrococcus abyssi DNA sequence DG(D1):DC(C20) DC(D2):DG(C19) DA(D3):DT(C18) DT(D4):DA(C17) DA(D5):DT(C16) DG(D6):DC(C15) DC(D7):DG(C14) DT(D8):DA(C13) DG(D9):DC(C12) DT(D10):ORP(C11) ORP(D11):DT(C10) DC(D12):DG(C9) DA(D13):DT(C8) DG(D14):DC(C7) DC(D15):DG(C6) DT(D16):DA(C5) DA(D17):DT(C4) DT(D18):DA(C3) DG(D19):DC(C2) DC(D20):DG(C1) chainA ( 21) THR28 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LYS30 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG32 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS34 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLU63 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLN65 0 0 0 0 0 0 0 0 16 10 0 0 0 0 0 0 0 0 0 0 ( 61) TYR68 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 62) ALA69 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (145) LYS152 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (147) ALA154 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 (148) GLN155 0 0 0 0 0 0 0 0 1 2 0 12 0 0 0 0 0 0 0 0 (149) ARG156 0 0 0 0 0 0 0 0 0 0 0 15 3 0 0 0 0 0 0 0 (150) ALA157 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 (151) VAL158 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (154) GLN161 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (156) MET163 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (158) TYR165 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 (207) ASP214 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 chainB ( 21) THR28 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 ( 23) LYS30 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 25) ARG32 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 ( 27) LYS34 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 56) GLU63 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 ( 58) GLN65 0 0 0 0 0 0 0 0 0 0 9 16 0 0 0 0 0 0 0 0 ( 61) TYR68 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 62) ALA69 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (145) LYS152 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (147) ALA154 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 (148) GLN155 0 0 0 0 0 0 0 0 12 0 2 1 0 0 0 0 0 0 0 0 (149) ARG156 0 0 0 0 0 0 0 10 15 0 0 0 0 0 0 0 0 0 0 0 (150) ALA157 0 0 0 0 0 0 0 12 2 0 0 0 0 0 0 0 0 0 0 0 (151) VAL158 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (154) GLN161 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 (156) MET163 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 (158) TYR165 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 (177) ARG184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (207) ASP214 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence easvsfengkivvrlpitrpTsKiRvKkiengvgipvstrkksfpsdenlrdyyiEwQisyardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlKhAQRAVgyQsMvYvcipltnvepslagrvarrnevvkyevpvdlmkellkafiiasethkndivkflrsii/easvsfengkivvrlpitrpTsKiRvKkiengvgipvstrkksfpsdenlrdyyiEwQisyardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlKhAQRAVgyQsMvYvcipltnvepslagrvarRnevvkyevpvdlmkellkafiiasethkndivkflrsiig >3waz_B:Transglycosidases; title=CRYSTAL STRUCTURE OF A RESTRICTION ENZYME PABI IN COMPLEX WITH DNA organism=Pyrococcus abyssi DNA sequence DG(D1):DC(C20) DC(D2):DG(C19) DA(D3):DT(C18) DT(D4):DA(C17) DA(D5):DT(C16) DG(D6):DC(C15) DC(D7):DG(C14) DT(D8):DA(C13) DG(D9):DC(C12) DT(D10):ORP(C11) ORP(D11):DT(C10) DC(D12):DG(C9) DA(D13):DT(C8) DG(D14):DC(C7) DC(D15):DG(C6) DT(D16):DA(C5) DA(D17):DT(C4) DT(D18):DA(C3) DG(D19):DC(C2) DC(D20):DG(C1) chainB ( 21) THR28 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 ( 23) LYS30 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 25) ARG32 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 ( 27) LYS34 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 56) GLU63 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 ( 58) GLN65 0 0 0 0 0 0 0 0 0 0 9 16 0 0 0 0 0 0 0 0 ( 61) TYR68 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 62) ALA69 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (145) LYS152 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (147) ALA154 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 (148) GLN155 0 0 0 0 0 0 0 0 12 0 2 1 0 0 0 0 0 0 0 0 (149) ARG156 0 0 0 0 0 0 0 10 15 0 0 0 0 0 0 0 0 0 0 0 (150) ALA157 0 0 0 0 0 0 0 12 2 0 0 0 0 0 0 0 0 0 0 0 (151) VAL158 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (154) GLN161 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 (156) MET163 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 (158) TYR165 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 (177) ARG184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (207) ASP214 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence easvsfengkivvrlpitrpTsKiRvKkiengvgipvstrkksfpsdenlrdyyiEwQisyardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlKhAQRAVgyQsMvYvcipltnvepslagrvarRnevvkyevpvdlmkellkafiiasethkndivkflrsiig >3wgi_CD:NADP-binding_Rossmann-fold_domains;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF RSP IN COMPLEX WITH BETA-NAD+ AND OPERATOR DNA organism=Thermoanaerobacter ethanolicus DNA sequence DG(G301):DC(H322) DA(G302):DT(H321) DT(G303):DA(H320) DT(G304):DA(H319) DG(G305):DC(H318) DT(G306):DA(H317) DT(G307):DA(H316) DA(G308):DT(H315) DA(G309):DT(H314) DT(G310):DA(H313) DC(G311):DG(H312) DG(G312):DC(H311) DA(G313):DT(H310) DT(G314):DA(H309) DT(G315):DA(H308) DA(G316):DT(H307) DA(G317):DT(H306) DC(G318):DG(H305) DA(G319):DT(H304) DA(G320):DT(H303) DT(G321):DA(H302) DC(G322):DG(H301) chainC ( 42) THR45 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) SER47 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN48 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG50 0 0 0 9 15 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) GLN51 0 0 0 0 0 1 1 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN54 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLN62 0 2 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 44) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 ( 45) GLN48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 47) ARG50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 18 12 0 0 0 ( 48) GLN51 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 2 1 0 0 0 0 0 ( 51) ASN54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 ( 59) GLN62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 2 0 prot.sequence ktivsmavirrlpryhryleellkndvkrissrelsekmgvTaSQiRQdlNnfggfgqQgygynveelynnltkilgldktyntiiigagnlgqaianytsfeksgfnlkgifdinprlfglkirdvevmdvetvedfiarnkidigilcipkdnaqytadrlvragikaiwnflpidlkvpddvilenvhlsdslftvsyrlneeelfkklkgeta/ktivsmavirrlpryhryleellkndvkrissrelsekmgvtaSQiRQdlNnfggfgqQgygynveelynnltkilgldktyntiiigagnlgqaianytsfeksgfnlkgifdinprlfglkirdvevmdvetvedfiarnkidigilcipkdnaqytadrlvragikaiwnflpidlkvpddvilenvhlsdslftvsyrlneeelfkklkgeta >3wgi_D:NADP-binding_Rossmann-fold_domains;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF RSP IN COMPLEX WITH BETA-NAD+ AND OPERATOR DNA organism=Thermoanaerobacter ethanolicus DNA sequence DG(G301):DC(H322) DA(G302):DT(H321) DT(G303):DA(H320) DT(G304):DA(H319) DG(G305):DC(H318) DT(G306):DA(H317) DT(G307):DA(H316) DA(G308):DT(H315) DA(G309):DT(H314) DT(G310):DA(H313) DC(G311):DG(H312) DG(G312):DC(H311) DA(G313):DT(H310) DT(G314):DA(H309) DT(G315):DA(H308) DA(G316):DT(H307) DA(G317):DT(H306) DC(G318):DG(H305) DA(G319):DT(H304) DA(G320):DT(H303) DT(G321):DA(H302) DC(G322):DG(H301) chainD ( 44) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 ( 45) GLN48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 47) ARG50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 18 12 0 0 0 ( 48) GLN51 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 2 1 0 0 0 0 0 ( 51) ASN54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 ( 59) GLN62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 2 0 prot.sequence ktivsmavirrlpryhryleellkndvkrissrelsekmgvtaSQiRQdlNnfggfgqQgygynveelynnltkilgldktyntiiigagnlgqaianytsfeksgfnlkgifdinprlfglkirdvevmdvetvedfiarnkidigilcipkdnaqytadrlvragikaiwnflpidlkvpddvilenvhlsdslftvsyrlneeelfkklkgeta >3wkj_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE NUCLEOSOME CONTAINING HUMAN TSH2B organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ILE40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/trkesysIyiykvlkqvhpdtgisskamsimnsfvtdiferiaseasrlahyskrstissreiqtavrlllpgelakhavsegtkavtkytss/pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitKpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyiykvlkqvhpdtgisskamSimnsfvtdiferiaseasrlahyskrstissreiqtavrlllpgelakhavsegtkavtkytss >3wpg_A:L_domain-like;RNI-like; title=CRYSTAL STRUCTURE OF MOUSE TLR9 IN COMPLEX WITH INHIBITORY DNA4084 (FORM 1) organism=Mus musculus DNA sequence DC(B1):DG(B9) DC(B2):DG(B8) DT(B3):DT(B7) DG(B4):DA(B6) chainA (169) LYS207 8 6 0 0 (170) TYR208 0 2 4 0 (188) LEU226 8 0 0 0 (191) TYR229 0 0 4 0 (210) VAL248 1 0 0 0 (212) ASP250 6 0 0 0 (252) VAL290 1 0 0 0 (254) LYS292 0 1 10 0 (276) ASP314 0 0 1 1 (302) ASN340 0 0 0 2 prot.sequence tlpaflpcelkglvdcnwlflksvprfascsnitrlslisnrihhlhnsdfvhlsnlrqlnlkwncpptgschmtieprtflamrtleelnlsyngittvprlpsslvnlslshtnilvldanslaglyslrvlfmdgncyyknpctgavkvtpgallglsqlthlslKYnnltkvprqlppsleylLvsYnlivklgpedlaqltslrVlDvggncrrcdhapnpciecgqkslhlhpetfhhlshleglVlKdsslhtlnsswfqglvqlsvlDlsenflyesithtnafqnltrlrklNlsfnyrkarlhlassfknlvslqelnmngiffrllnkytlrwladlpklhtlhlqmnfinqaqlsifgtfralrfvdlsdnrisgpstmdrcknfkftmdlsrnnlvtikpemfvqlsrlqclslshnsiaqavngsqflpltnlqvldlshnkldlyhwksfselpqlqaldlsynsqgighqfsfvthlsmlqslslahndihtrvsshlnsnsvrfldfsgngmgrmwdegglylhffqglsgllkldlsqnnlhilrpqnldnlpkslkllslrdnylsffnwtslsflpnlevldlagnqlkaltqgtlpngtllqkldvssnsivsvvpaffalavelkevnlshnilktvdrswfgpivmqltvldvrsnplhcacgaafvdlllevqtkvpglangvkcgspgqlqgrsifaqdlrlc >3wph_A:L_domain-like; title=CRYSTAL STRUCTURE OF MOUSE TLR9 IN COMPLEX WITH INHIBITORY DNA4084 (FORM 2) organism=Mus musculus DNA sequence DC(B1):DG(B9) DC(B2):DG(B8) DT(B3):DT(B7) DG(B4):DA(B6) chainA (169) LYS207 9 5 0 0 (170) TYR208 0 1 3 0 (188) LEU226 8 0 0 0 (191) TYR229 0 0 3 0 (210) VAL248 2 0 0 0 (212) ASP250 7 0 0 0 (252) VAL290 1 0 0 0 (254) LYS292 0 1 8 0 (276) ASP314 0 0 1 1 (302) ASN340 0 0 0 2 prot.sequence tlpaflpcelkglvdcnwlflksvprfascsnitrlslisnrihhlhnsdfvhlsnlrqlnlkwncpptgschmtieprtflamrtleelnlsyngittvprlpsslvnlslshtnilvldanslaglyslrvlfmdgncyyknpctgavkvtpgallglsqlthlslKYnnltkvprqlppsleylLvsYnlivklgpedlaqltslrVlDvggncrrcdhapnpciecgqkslhlhpetfhhlshleglVlKdsslhtlnsswfqglvqlsvlDlSenflyesithtnafqnltrlrklNlsfnyarlhlassfknlvslqelnmngiffrllnkytlrwladlpklhtlhlqmnfinqaqlsifgtfralrfvdlsdnrisgpstmdrcknfkftmdlsrnnlvtikpemfvqlsrlqclslshnsiaqavngsqflpltnlqvldlshnkldlyhwksfselpqlqaldlsynsgighqfsfvthlsmlqslslahndihtrvsshlnsnsvrfldfsgngmgrmwdegglylhffqglsgllkldlsqnnlhilrpqnldnlpkslkllslrdnylsffnwtslsflpnlevldlagnqlkaltqgtlpngtllqkldvssnsivsvvpaffalavelkevnlshnilktvdrswfgpivmqltvldvrsnplhcacgaafvdlllevqtkvpglangvkcgspgqlqgrsifaqdlrlc >3wtp_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE HETEROTYPIC NUCLEOSOME CONTAINING HUMAN CENP- A AND H3.3 organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 4) LYS49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 20) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gwlKeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirg/niqGitkpairrlarrggvKrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/kkphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnysErvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavll/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >3wtp_D:Histone-fold; title=CRYSTAL STRUCTURE OF THE HETEROTYPIC NUCLEOSOME CONTAINING HUMAN CENP- A AND H3.3 organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainD ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >3wts_A:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1, RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=MUS MUSCULUS DNA sequence DG(D1):DC(E115) DA(D2):DT(E114) DA(D3):DT(E113) DG(D4):DC(E112) DC(D5):DG(E111) DC(D6):DG(E110) DA(D7):DT(E109) DC(D8):DG(E108) DA(D9):DT(E107) DT(D10):DA(E106) DC(D11):DG(E105) DC(D12):DG(E104) DT(D13):DA(E103) DC(D14):DG(E102) DT(D15):DA(E101) chainA ( 22) ARG80 0 0 0 0 0 0 0 12 11 0 0 0 0 0 0 ( 84) ARG142 4 9 6 0 0 0 0 0 0 0 0 0 0 0 0 (112) VAL170 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (113) ASP171 0 0 0 1 9 6 1 0 0 0 0 0 0 0 0 (116) ARG174 0 0 0 0 2 12 14 0 0 0 0 0 0 0 0 (119) ARG177 0 0 0 6 12 10 0 0 0 0 0 0 0 0 0 prot.sequence mgelvrtdspnflcsvlpthwRcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepR >3wts_AC:p53-like_transcription_factors;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1, RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DG(D1):DC(E115) DA(D2):DT(E114) DA(D3):DT(E113) DG(D4):DC(E112) DC(D5):DG(E111) DC(D6):DG(E110) DA(D7):DT(E109) DC(D8):DG(E108) DA(D9):DT(E107) DT(D10):DA(E106) DC(D11):DG(E105) DC(D12):DG(E104) DT(D13):DA(E103) DC(D14):DG(E102) DT(D15):DA(E101) chainA ( 22) ARG80 0 0 0 0 0 0 0 12 11 0 0 0 0 0 0 ( 84) ARG142 4 9 6 0 0 0 0 0 0 0 0 0 0 0 0 (112) VAL170 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (113) ASP171 0 0 0 1 9 6 1 0 0 0 0 0 0 0 0 (116) ARG174 0 0 0 0 2 12 14 0 0 0 0 0 0 0 0 (119) ARG177 0 0 0 6 12 10 0 0 0 0 0 0 0 0 0 chainC ( 70) LYS388 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 73) ARG391 0 0 0 0 0 0 0 0 0 7 20 24 0 0 0 ( 76) ARG394 0 0 0 0 0 0 0 0 0 0 0 16 16 0 0 ( 77) TYR395 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 prot.sequence mgelvrtdspnflcsvlpthwRcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepR/pvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk >3wtt_AC:p53-like_transcription_factors;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF PHOSPHORYLATED ETS1, RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DG(D1):DC(E15) DA(D2):DT(E14) DA(D3):DT(E13) DG(D4):DC(E12) DC(D5):DG(E11) DC(D6):DG(E10) DA(D7):DT(E9) DC(D8):DG(E8) DA(D9):DT(E7) DT(D10):DA(E6) DC(D11):DG(E5) DC(D12):DG(E4) DT(D13):DA(E3) DC(D14):DG(E2) DT(D15):DA(E1) chainA ( 21) ARG80 0 0 0 0 0 0 0 10 11 0 0 0 0 0 0 ( 83) ARG142 4 9 6 0 0 0 0 0 0 0 0 0 0 0 0 (111) VAL170 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (112) ASP171 0 0 0 1 9 6 0 0 0 0 0 0 0 0 0 (115) ARG174 0 0 0 0 2 13 16 0 0 0 0 0 0 0 0 (118) ARG177 0 0 0 8 13 14 0 0 0 0 0 0 0 0 0 chainC ( 69) GLU387 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 70) LYS388 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 73) ARG391 0 0 0 0 0 0 0 0 0 8 19 23 0 0 0 ( 76) ARG394 0 0 0 0 0 0 0 0 0 0 0 16 16 0 0 ( 77) TYR395 0 0 0 0 0 0 0 1 4 6 0 0 0 0 0 prot.sequence gelvrtdspnflcsvlpthwRcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepRr/pvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk >3wtt_H:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF PHOSPHORYLATED ETS1, RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=HOMO SAPIENS DNA sequence DG(I1):DC(J15) DA(I2):DT(J14) DA(I3):DT(J13) DG(I4):DC(J12) DC(I5):DG(J11) DC(I6):DG(J10) DA(I7):DT(J9) DC(I8):DG(J8) DA(I9):DT(J7) DT(I10):DA(J6) DC(I11):DG(J5) DC(I12):DG(J4) DT(I13):DA(J3) DC(I14):DG(J2) DT(I15):DA(J1) DG(D1):DC(E15) DA(D2):DT(E14) DA(D3):DT(E13) DG(D4):DC(E12) DC(D5):DG(E11) DC(D6):DG(E10) DA(D7):DT(E9) DC(D8):DG(E8) DA(D9):DT(E7) DT(D10):DA(E6) DC(D11):DG(E5) DC(D12):DG(E4) DT(D13):DA(E3) DC(D14):DG(E2) DT(D15):DA(E1) chainH ( 56) LYS388 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG391 0 0 0 0 0 0 0 0 0 5 15 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG394 0 0 0 0 0 0 0 0 0 0 0 14 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR395 0 0 0 0 0 0 0 2 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgyt >3wtu_AC:p53-like_transcription_factors;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1 (V170A), RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DA(E1):DT(D15) DG(E2):DC(D14) DA(E3):DT(D13) DG(E4):DC(D12) DG(E5):DC(D11) DA(E6):DT(D10) DT(E7):DA(D9) DG(E8):DC(D8) DT(E9):DA(D7) DG(E10):DC(D6) DG(E11):DC(D5) DC(E12):DG(D4) DT(E13):DA(D3) DT(E14):DA(D2) DC(E15):DG(D1) chainA ( 21) ARG80 0 0 0 0 0 0 12 13 0 0 0 0 0 0 0 ( 83) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 6 10 6 (111) ALA170 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (112) ASP171 0 0 0 0 0 0 0 0 1 6 9 0 0 0 0 (115) ARG174 0 0 0 0 0 0 0 0 11 12 1 0 0 0 0 (118) ARG177 0 0 0 0 0 0 0 0 0 12 12 7 0 0 0 chainC ( 70) LYS388 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 73) ARG391 0 0 0 24 19 8 0 0 0 0 0 0 0 0 0 ( 76) ARG394 0 0 15 16 0 0 0 0 0 0 0 0 0 0 0 ( 77) TYR395 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 prot.sequence gelvrtdspnflcsvlpthwRcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitADgpRepR/pvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk >3wtu_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1 (V170A), RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=? DNA sequence DG(D1):DC(E15) DA(D2):DT(E14) DA(D3):DT(E13) DG(D4):DC(E12) DC(D5):DG(E11) DC(D6):DG(E10) DA(D7):DT(E9) DC(D8):DG(E8) DA(D9):DT(E7) DT(D10):DA(E6) DC(D11):DG(E5) DC(D12):DG(E4) DT(D13):DA(E3) DC(D14):DG(E2) DT(D15):DA(E1) chainC ( 70) LYS388 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 73) ARG391 0 0 0 0 0 0 0 0 0 8 19 24 0 0 0 ( 76) ARG394 0 0 0 0 0 0 0 0 0 0 0 16 15 0 0 ( 77) TYR395 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 prot.sequence pvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk >3wtv_A:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1(V170G), RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=MUS MUSCULUS DNA sequence DA(E1):DT(D15) DG(E2):DC(D14) DA(E3):DT(D13) DG(E4):DC(D12) DG(E5):DC(D11) DA(E6):DT(D10) DT(E7):DA(D9) DG(E8):DC(D8) DT(E9):DA(D7) DG(E10):DC(D6) DG(E11):DC(D5) DC(E12):DG(D4) DT(E13):DA(D3) DT(E14):DA(D2) DC(E15):DG(D1) chainA ( 21) ARG80 0 0 0 0 0 0 12 13 0 0 0 0 0 0 0 ( 83) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 6 8 2 (112) ASP171 0 0 0 0 0 0 0 0 1 6 9 0 0 0 0 (115) ARG174 0 0 0 0 0 0 0 0 16 13 1 0 0 0 0 (118) ARG177 0 0 0 0 0 0 0 0 0 13 12 7 0 0 0 prot.sequence gelvrtdspnflcsvlpthwRcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitgDgpRepR >3wtv_AC:p53-like_transcription_factors;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1(V170G), RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DG(D1):DC(E15) DA(D2):DT(E14) DA(D3):DT(E13) DG(D4):DC(E12) DC(D5):DG(E11) DC(D6):DG(E10) DA(D7):DT(E9) DC(D8):DG(E8) DA(D9):DT(E7) DT(D10):DA(E6) DC(D11):DG(E5) DC(D12):DG(E4) DT(D13):DA(E3) DC(D14):DG(E2) DT(D15):DA(E1) chainA ( 21) ARG80 0 0 0 0 0 0 0 13 12 0 0 0 0 0 0 ( 83) ARG142 2 8 6 0 0 0 0 0 0 0 0 0 0 0 0 (112) ASP171 0 0 0 0 9 6 1 0 0 0 0 0 0 0 0 (115) ARG174 0 0 0 0 1 13 16 0 0 0 0 0 0 0 0 (118) ARG177 0 0 0 7 12 13 0 0 0 0 0 0 0 0 0 chainC ( 70) LYS388 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 73) ARG391 0 0 0 0 0 0 0 0 0 8 19 25 0 0 0 ( 76) ARG394 0 0 0 0 0 0 0 0 0 0 0 15 12 0 0 ( 77) TYR395 0 0 0 0 0 0 0 1 4 5 0 0 0 0 0 prot.sequence gelvrtdspnflcsvlpthwRcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitgDgpRepR/pvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk >3wtw_AC:p53-like_transcription_factors;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1(K167A), RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DA(E1):DT(D15) DG(E2):DC(D14) DA(E3):DT(D13) DG(E4):DC(D12) DG(E5):DC(D11) DA(E6):DT(D10) DT(E7):DA(D9) DG(E8):DC(D8) DT(E9):DA(D7) DG(E10):DC(D6) DG(E11):DC(D5) DC(E12):DG(D4) DT(E13):DA(D3) DT(E14):DA(D2) DC(E15):DG(D1) chainA ( 21) ARG80 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 ( 83) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 8 8 4 (111) VAL170 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (112) ASP171 0 0 0 0 0 0 0 0 1 6 9 0 0 0 0 (115) ARG174 0 0 0 0 0 0 0 0 11 12 2 0 0 0 0 (118) ARG177 0 0 0 0 0 0 0 0 0 7 9 8 0 0 0 chainC ( 70) LYS388 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 73) ARG391 0 0 0 21 16 5 0 0 0 0 0 0 0 0 0 ( 76) ARG394 0 0 12 13 0 0 0 0 0 0 0 0 0 0 0 ( 77) TYR395 0 0 0 0 0 7 4 1 0 0 0 0 0 0 0 prot.sequence gelvrtdspnflcsvlpthwRcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraiaitVDgpRepR/pvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk >3wtw_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1(K167A), RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=? DNA sequence DA(E1):DT(D15) DG(E2):DC(D14) DA(E3):DT(D13) DG(E4):DC(D12) DG(E5):DC(D11) DA(E6):DT(D10) DT(E7):DA(D9) DG(E8):DC(D8) DT(E9):DA(D7) DG(E10):DC(D6) DG(E11):DC(D5) DC(E12):DG(D4) DT(E13):DA(D3) DT(E14):DA(D2) DC(E15):DG(D1) chainC ( 70) LYS388 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 73) ARG391 0 0 0 21 16 5 0 0 0 0 0 0 0 0 0 ( 76) ARG394 0 0 12 13 0 0 0 0 0 0 0 0 0 0 0 ( 77) TYR395 0 0 0 0 0 7 4 1 0 0 0 0 0 0 0 prot.sequence pvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk >3wtx_AC:p53-like_transcription_factors;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1(Y329A), RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DA(E101):DT(D15) DG(E102):DC(D14) DA(E103):DT(D13) DG(E104):DC(D12) DG(E105):DC(D11) DA(E106):DT(D10) DT(E107):DA(D9) DG(E108):DC(D8) DT(E109):DA(D7) DG(E110):DC(D6) DG(E111):DC(D5) DC(E112):DG(D4) DT(E113):DA(D3) DT(E114):DA(D2) DC(E115):DG(D1) chainA ( 21) ARG80 0 0 0 0 0 0 12 11 0 0 0 0 0 0 0 ( 83) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 6 9 5 (111) VAL170 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 (112) ASP171 0 0 0 0 0 0 0 0 1 6 9 0 0 0 0 (115) ARG174 0 0 0 0 0 0 0 0 10 12 2 0 0 0 0 (118) ARG177 0 0 0 0 0 0 0 0 0 12 10 8 0 0 0 chainC ( 55) LYS388 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 58) ARG391 0 0 0 23 18 8 0 0 0 0 0 0 0 0 0 ( 61) ARG394 0 0 15 13 0 0 0 0 0 0 0 0 0 0 0 ( 62) TYR395 0 0 0 0 0 5 5 1 0 0 0 0 0 0 0 prot.sequence gelvrtdspnflcsvlpthwRcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepR/piqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk >3wtx_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1(Y329A), RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=? DNA sequence DA(E101):DT(D15) DG(E102):DC(D14) DA(E103):DT(D13) DG(E104):DC(D12) DG(E105):DC(D11) DA(E106):DT(D10) DT(E107):DA(D9) DG(E108):DC(D8) DT(E109):DA(D7) DG(E110):DC(D6) DG(E111):DC(D5) DC(E112):DG(D4) DT(E113):DA(D3) DT(E114):DA(D2) DC(E115):DG(D1) chainC ( 55) LYS388 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 58) ARG391 0 0 0 23 18 8 0 0 0 0 0 0 0 0 0 ( 61) ARG394 0 0 15 13 0 0 0 0 0 0 0 0 0 0 0 ( 62) TYR395 0 0 0 0 0 5 5 1 0 0 0 0 0 0 0 prot.sequence piqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk >3wty_A:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1(G333P), RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=? DNA sequence DG(D1):DC(E15) DA(D2):DT(E14) DA(D3):DT(E13) DG(D4):DC(E12) DC(D5):DG(E11) DC(D6):DG(E10) DA(D7):DT(E9) DC(D8):DG(E8) DA(D9):DT(E7) DT(D10):DA(E6) DC(D11):DG(E5) DC(D12):DG(E4) DT(D13):DA(E3) DC(D14):DG(E2) DT(D15):DA(E1) chainA ( 21) ARG80 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 ( 83) ARG142 4 10 8 0 0 0 0 0 0 0 0 0 0 0 0 (111) VAL170 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (112) ASP171 0 0 0 1 9 6 1 0 0 0 0 0 0 0 0 (115) ARG174 0 0 0 0 1 13 14 0 0 0 0 0 0 0 0 (118) ARG177 0 0 0 7 11 13 0 0 0 0 0 0 0 0 0 prot.sequence gelvrtdspnflcsvlpthwRcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepR >3wty_AC:p53-like_transcription_factors;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1(G333P), RUNX1, CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DG(D1):DC(E15) DA(D2):DT(E14) DA(D3):DT(E13) DG(D4):DC(E12) DC(D5):DG(E11) DC(D6):DG(E10) DA(D7):DT(E9) DC(D8):DG(E8) DA(D9):DT(E7) DT(D10):DA(E6) DC(D11):DG(E5) DC(D12):DG(E4) DT(D13):DA(E3) DC(D14):DG(E2) DT(D15):DA(E1) chainA ( 21) ARG80 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 ( 83) ARG142 4 10 8 0 0 0 0 0 0 0 0 0 0 0 0 (111) VAL170 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (112) ASP171 0 0 0 1 9 6 1 0 0 0 0 0 0 0 0 (115) ARG174 0 0 0 0 1 13 14 0 0 0 0 0 0 0 0 (118) ARG177 0 0 0 7 11 13 0 0 0 0 0 0 0 0 0 chainC ( 70) LYS388 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 73) ARG391 0 0 0 0 0 0 0 0 0 8 16 24 0 0 0 ( 76) ARG394 0 0 0 0 0 0 0 0 0 0 0 14 15 0 0 ( 77) TYR395 0 0 0 0 0 0 0 1 4 5 0 0 0 0 0 prot.sequence gelvrtdspnflcsvlpthwRcnktlpiafkvvakgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepR/pvipaaalagytgsppiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk >3wu1_AB:p53-like_transcription_factors;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ETS1-RUNX1-DNA TERNARY COMPLEX organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DA(D102):DT(C16) DG(D103):DC(C15) DA(D104):DT(C14) DG(D105):DC(C13) DG(D106):DC(C12) DA(D107):DT(C11) DT(D108):DA(C10) DG(D109):DC(C9) DT(D110):DA(C8) DG(D111):DC(C7) DG(D112):DC(C6) DC(D113):DG(C5) DT(D114):DA(C4) DT(D115):DA(C3) DC(D116):DG(C2) chainA ( 26) ARG80 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 ( 88) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 8 8 1 (116) VAL170 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 (117) ASP171 0 0 0 0 0 0 0 0 1 5 9 0 0 0 0 (120) ARG174 0 0 0 0 0 0 0 0 23 14 2 0 0 0 0 (123) ARG177 0 0 0 0 0 0 0 0 0 10 12 4 0 0 0 chainB ( 56) LYS388 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 59) ARG391 0 0 0 19 18 8 0 0 0 0 0 0 0 0 0 ( 62) ARG394 0 0 11 12 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR395 0 0 0 0 0 4 4 3 0 0 0 0 0 0 0 prot.sequence ladhpgelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepR/gpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkp >3wu1_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ETS1-RUNX1-DNA TERNARY COMPLEX organism=? DNA sequence DG(C2):DC(D116) DA(C3):DT(D115) DA(C4):DT(D114) DG(C5):DC(D113) DC(C6):DG(D112) DC(C7):DG(D111) DA(C8):DT(D110) DC(C9):DG(D109) DA(C10):DT(D108) DT(C11):DA(D107) DC(C12):DG(D106) DC(C13):DG(D105) DT(C14):DA(D104) DC(C15):DG(D103) DT(C16):DA(D102) chainB ( 56) LYS388 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 59) ARG391 0 0 0 0 0 0 0 0 0 8 18 19 0 0 0 ( 62) ARG394 0 0 0 0 0 0 0 0 0 0 0 12 11 0 0 ( 63) TYR395 0 0 0 0 0 0 0 3 4 4 0 0 0 0 0 prot.sequence gpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkp >3wvg_AB: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 0SEC SOAKING organism=HAEMOPHILUS INFLUENZAE DNA sequence DG(E1):DC(F12) DC(E2):DG(F11) DC(E3):DG(F10) DA(E4):DT(F9) DA(E5):DT(F8) DG(E6):DC(F7) DC(E7):DG(F6) DT(E8):DA(F5) DT(E9):DA(F4) DG(E10):DC(F3) DG(E11):DC(F2) DC(E12):DG(F1) DG(I1):DC(J12) DC(I2):DG(J11) DC(I3):DG(J10) DA(I4):DT(J9) DA(I5):DT(J8) DG(I6):DC(J7) DC(I7):DG(J6) DT(I8):DA(J5) DT(I9):DA(J4) DG(I10):DC(J3) DG(I11):DC(J2) DC(I12):DG(J1) chainA ( 55) SER56 0 0 0 4 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS61 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG88 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ALA118 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ASN120 0 0 0 0 0 0 2 8 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ASP123 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 55) SER56 0 0 0 0 0 0 2 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) THR117 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ALA118 0 0 4 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ASN120 0 0 3 7 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ASP123 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl/ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvg_CD: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 0SEC SOAKING organism=HAEMOPHILUS INFLUENZAE DNA sequence DG(L1):DC(K12) DC(L2):DG(K11) DC(L3):DG(K10) DA(L4):DT(K9) DA(L5):DT(K8) DG(L6):DC(K7) DC(L7):DG(K6) DT(L8):DA(K5) DT(L9):DA(K4) DG(L10):DC(K3) DG(L11):DC(K2) DC(L12):DG(K1) DG(H1):DC(G12) DC(H2):DG(G11) DC(H3):DG(G10) DA(H4):DT(G9) DA(H5):DT(G8) DG(H6):DC(G7) DC(H7):DG(G6) DT(H8):DA(G5) DT(H9):DA(G4) DG(H10):DC(G3) DG(H11):DC(G2) DC(H12):DG(G1) chainC ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 4 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 4 0 0 0 0 0 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 8 2 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 chainD ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 3 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 7 4 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl/ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvg_D: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 0SEC SOAKING organism=? DNA sequence DG(L1):DC(K12) DC(L2):DG(K11) DC(L3):DG(K10) DA(L4):DT(K9) DA(L5):DT(K8) DG(L6):DC(K7) DC(L7):DG(K6) DT(L8):DA(K5) DT(L9):DA(K4) DG(L10):DC(K3) DG(L11):DC(K2) DC(L12):DG(K1) DG(H1):DC(G12) DC(H2):DG(G11) DC(H3):DG(G10) DA(H4):DT(G9) DA(H5):DT(G8) DG(H6):DC(G7) DC(H7):DG(G6) DT(H8):DA(G5) DT(H9):DA(G4) DG(H10):DC(G3) DG(H11):DC(G2) DC(H12):DG(G1) chainD ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 3 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 7 4 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvh_AB: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 25SEC SOAKING organism=HAEMOPHILUS INFLUENZAE DNA sequence DG(E1):DC(F12) DC(E2):DG(F11) DC(E3):DG(F10) DA(E4):DT(F9) DA(E5):DT(F8) DG(E6):DC(F7) DC(E7):DG(F6) DT(E8):DA(F5) DT(E9):DA(F4) DG(E10):DC(F3) DG(E11):DC(F2) DC(E12):DG(F1) DG(I1):DC(J12) DC(I2):DG(J11) DC(I3):DG(J10) DA(I4):DT(J9) DA(I5):DT(J8) DG(I6):DC(J7) DC(I7):DG(J6) DT(I8):DA(J5) DT(I9):DA(J4) DG(I10):DC(J3) DG(I11):DC(J2) DC(I12):DG(J1) chainB ( 55) SER56 0 0 0 0 0 0 2 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) THR117 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ALA118 0 0 3 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ASN120 0 0 4 7 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ASP123 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 55) SER56 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS61 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG88 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ALA118 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ASN120 0 0 0 0 0 0 3 8 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ASP123 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl/ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvh_CD: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 25SEC SOAKING organism=HAEMOPHILUS INFLUENZAE DNA sequence DG(L1):DC(K12) DC(L2):DG(K11) DC(L3):DG(K10) DA(L4):DT(K9) DA(L5):DT(K8) DG(L6):DC(K7) DC(L7):DG(K6) DT(L8):DA(K5) DT(L9):DA(K4) DG(L10):DC(K3) DG(L11):DC(K2) DC(L12):DG(K1) DG(H1):DC(G12) DC(H2):DG(G11) DC(H3):DG(G10) DA(H4):DT(G9) DA(H5):DT(G8) DG(H6):DC(G7) DC(H7):DG(G6) DT(H8):DA(G5) DT(H9):DA(G4) DG(H10):DC(G3) DG(H11):DC(G2) DC(H12):DG(G1) chainD ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 4 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 7 4 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 2 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 chainC ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 4 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 8 1 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl/ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvh_D: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 25SEC SOAKING organism=? DNA sequence DG(G1):DC(H12) DC(G2):DG(H11) DC(G3):DG(H10) DA(G4):DT(H9) DA(G5):DT(H8) DG(G6):DC(H7) DC(G7):DG(H6) DT(G8):DA(H5) DT(G9):DA(H4) DG(G10):DC(H3) DG(G11):DC(H2) DC(G12):DG(H1) DG(K1):DC(L12) DC(K2):DG(L11) DC(K3):DG(L10) DA(K4):DT(L9) DA(K5):DT(L8) DG(K6):DC(L7) DC(K7):DG(L6) DT(K8):DA(L5) DT(K9):DA(L4) DG(K10):DC(L3) DG(K11):DC(L2) DC(K12):DG(L1) chainD ( 55) SER56 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) THR117 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ALA118 0 0 4 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ASN120 0 0 4 7 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) LYS122 0 0 0 0 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ASP123 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvi_A: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 40 SEC SOAKING organism=HAEMOPHILUS INFLUENZAE DNA sequence DG(J1):DC(I12) DC(J2):DG(I11) DC(J3):DG(I10) DA(J4):DT(I9) DA(J5):DT(I8) DG(J6):DC(I7) DC(J7):DG(I6) DT(J8):DA(I5) DT(J9):DA(I4) DG(J10):DC(I3) DG(J11):DC(I2) DC(J12):DG(I1) DG(F1):DC(E12) DC(F2):DG(E11) DC(F3):DG(E10) DA(F4):DT(E9) DA(F5):DT(E8) DG(F6):DC(E7) DC(F7):DG(E6) DT(F8):DA(E5) DT(F9):DA(E4) DG(F10):DC(E3) DG(F11):DC(E2) DC(F12):DG(E1) chainA ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 8 2 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 2 0 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 (124) LYS125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvi_AB: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 40 SEC SOAKING organism=HAEMOPHILUS INFLUENZAE DNA sequence DG(J1):DC(I12) DC(J2):DG(I11) DC(J3):DG(I10) DA(J4):DT(I9) DA(J5):DT(I8) DG(J6):DC(I7) DC(J7):DG(I6) DT(J8):DA(I5) DT(J9):DA(I4) DG(J10):DC(I3) DG(J11):DC(I2) DC(J12):DG(I1) DG(F1):DC(E12) DC(F2):DG(E11) DC(F3):DG(E10) DA(F4):DT(E9) DA(F5):DT(E8) DG(F6):DC(E7) DC(F7):DG(E6) DT(F8):DA(E5) DT(F9):DA(E4) DG(F10):DC(E3) DG(F11):DC(E2) DC(F12):DG(E1) chainA ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 8 2 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 2 0 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 (124) LYS125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainB ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 2 0 0 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 3 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 7 4 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl/ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfkvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvi_CD: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 40 SEC SOAKING organism=HAEMOPHILUS INFLUENZAE DNA sequence DG(G1):DC(H12) DC(G2):DG(H11) DC(G3):DG(H10) DA(G4):DT(H9) DA(G5):DT(H8) DG(G6):DC(H7) DC(G7):DG(H6) DT(G8):DA(H5) DT(G9):DA(H4) DG(G10):DC(H3) DG(G11):DC(H2) DC(G12):DG(H1) DG(K1):DC(L12) DC(K2):DG(L11) DC(K3):DG(L10) DA(K4):DT(L9) DA(K5):DT(L8) DG(K6):DC(L7) DC(K7):DG(L6) DT(K8):DA(L5) DT(K9):DA(L4) DG(K10):DC(L3) DG(K11):DC(L2) DC(K12):DG(L1) chainC ( 55) SER56 0 0 0 3 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS61 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG88 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ALA118 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ASN120 0 0 0 0 0 0 2 8 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ASP123 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 55) SER56 0 0 0 0 0 0 1 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) THR117 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ALA118 0 0 4 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ASN120 0 0 4 8 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) LYS122 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ASP123 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl/ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvk_AB: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 230SEC SOAKING organism=Haemophilus influenzae DNA sequence DG(N1):DC(M12) DC(N2):DG(M11) DC(N3):DG(M10) DA(N4):DT(M9) DA(N5):DT(M8) DG(N6):DC(M7) DC(N7):DG(M6) DT(N8):DA(M5) DT(N9):DA(M4) DG(N10):DC(M3) DG(N11):DC(M2) DC(N12):DG(M1) DG(G1):DC(F8) DC(G2):DG(F7) DC(G3):DG(F6) DA(G4):DT(F5) DA(H1):DT(F4) DG(H2):DC(F3) DC(H3):DG(F2) DT(H4):DA(F1) DT(H5):DA(E4) DG(H6):DC(E3) DG(H7):DC(E2) DC(H8):DG(E1) chainA ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 4 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 4 0 0 0 0 0 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 8 2 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 (124) LYS125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainB ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 2 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 4 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 7 3 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 (124) LYS125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqrgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl/ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqrgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvk_C: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 230SEC SOAKING organism=Haemophilus influenzae DNA sequence DG(P1):DC(O12) DC(P2):DG(O11) DC(P3):DG(O10) DA(P4):DT(O9) DA(P5):DT(O8) DG(P6):DC(O7) DC(P7):DG(O6) DT(P8):DA(O5) DT(P9):DA(O4) DG(P10):DC(O3) DG(P11):DC(O2) DC(P12):DG(O1) DG(K1):DC(J8) DC(K2):DG(J7) DC(K3):DG(J6) DA(K4):DT(J5) DA(L1):DT(J4) DG(L2):DC(J3) DC(L3):DG(J2) DT(L4):DA(J1) DT(L5):DA(I4) DG(L6):DC(I3) DG(L7):DC(I2) DC(L8):DG(I1) chainC ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 4 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 8 2 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 (124) LYS125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqrgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvk_CD: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 230SEC SOAKING organism=Haemophilus influenzae DNA sequence DG(P1):DC(O12) DC(P2):DG(O11) DC(P3):DG(O10) DA(P4):DT(O9) DA(P5):DT(O8) DG(P6):DC(O7) DC(P7):DG(O6) DT(P8):DA(O5) DT(P9):DA(O4) DG(P10):DC(O3) DG(P11):DC(O2) DC(P12):DG(O1) DG(K1):DC(J8) DC(K2):DG(J7) DC(K3):DG(J6) DA(K4):DT(J5) DA(L1):DT(J4) DG(L2):DC(J3) DC(L3):DG(J2) DT(L4):DA(J1) DT(L5):DA(I4) DG(L6):DC(I3) DG(L7):DC(I2) DC(L8):DG(I1) chainC ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 4 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 8 2 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 (124) LYS125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainD ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 4 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 7 4 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 (124) LYS125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqrgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl/ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqrgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvp_A: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 60SEC SOAKING organism=? DNA sequence DG(J1):DC(I12) DC(J2):DG(I11) DC(J3):DG(I10) DA(J4):DT(I9) DA(J5):DT(I8) DG(J6):DC(I7) DC(J7):DG(I6) DT(J8):DA(I5) DT(J9):DA(I4) DG(J10):DC(I3) DG(J11):DC(I2) DC(J12):DG(I1) DG(G1):DC(H12) DC(G2):DG(H11) DC(G3):DG(H10) DA(G4):DT(H9) DA(G5):DT(H8) DG(G6):DC(H7) DC(G7):DG(H6) DT(G8):DA(H5) DT(G9):DA(H4) DG(G10):DC(H3) DG(G11):DC(H2) DC(G12):DG(H1) chainA ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 2 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 4 0 0 0 0 0 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 8 2 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 (124) LYS125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvp_AB: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 60SEC SOAKING organism=HAEMOPHILUS INFLUENZAE DNA sequence DG(H1):DC(G12) DC(H2):DG(G11) DC(H3):DG(G10) DA(H4):DT(G9) DA(H5):DT(G8) DG(H6):DC(G7) DC(H7):DG(G6) DT(H8):DA(G5) DT(H9):DA(G4) DG(H10):DC(G3) DG(H11):DC(G2) DC(H12):DG(G1) DG(I1):DC(J12) DC(I2):DG(J11) DC(I3):DG(J10) DA(I4):DT(J9) DA(I5):DT(J8) DG(I6):DC(J7) DC(I7):DG(J6) DT(I8):DA(J5) DT(I9):DA(J4) DG(I10):DC(J3) DG(I11):DC(J2) DC(I12):DG(J1) chainA ( 55) SER56 0 0 0 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS61 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG88 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ALA118 0 0 0 0 0 0 0 4 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ASN120 0 0 0 0 0 0 2 8 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ASP123 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) LYS125 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 55) SER56 0 0 0 0 0 0 2 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) THR117 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ALA118 0 0 3 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ASN120 0 0 3 7 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ASP123 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl/ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3wvp_CD: title=TIME-RESOLVED CRYSTAL STRUCTURE OF HINDIII WITH 60SEC SOAKING organism=HAEMOPHILUS INFLUENZAE DNA sequence DG(L1):DC(K12) DC(L2):DG(K11) DC(L3):DG(K10) DA(L4):DT(K9) DA(L5):DT(K8) DG(L6):DC(K7) DC(L7):DG(K6) DT(L8):DA(K5) DT(L9):DA(K4) DG(L10):DC(K3) DG(L11):DC(K2) DC(L12):DG(K1) DG(E1):DC(F12) DC(E2):DG(F11) DC(E3):DG(F10) DA(E4):DT(F9) DA(E5):DT(F8) DG(E6):DC(F7) DC(E7):DG(F6) DT(E8):DA(F5) DT(E9):DA(F4) DG(E10):DC(F3) DG(E11):DC(F2) DC(E12):DG(F1) chainC ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 3 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 8 2 0 0 0 0 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 chainD ( 55) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 ( 59) GLU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 60) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 ( 87) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (115) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 (116) THR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 (117) ALA118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 4 0 0 (119) ASN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 7 4 0 0 (121) LYS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 (122) ASP123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 (124) LYS125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl/ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl >3x1l_ABCDEFGH: title=CRYSTAL STRUCTURE OF THE CRISPR-CAS RNA SILENCING CMR COMPLEX BOUND TO A TARGET ANALOG organism=ARCHAEOGLOBUS FULGIDUS DSM 4304 / PYROCOCCUS FURIOSUS DSM 3638 DNA sequence DC(J10) DC(J11) DG(J12) DC(J13) DA(J14) DA(J15) DG(J16) DG(J17) DA(J18) DC(J19) DC(J20) DG(J21) DC(J22) DA(J23) DT(J24) DA(J25) DC(J26) DT(J27) DA(J28) DC(J29) DA(J30) DA(J31) chainA (494) ARG790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 chainB (155) VAL158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (160) LEU163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 chainC ( 25) ASP31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 26) LEU32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (242) VAL265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (251) VAL274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (256) LEU279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 (257) TRP280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 chainD ( 31) ASP31 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 32) LEU32 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (116) SER117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (252) ARG266 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 (260) VAL274 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (265) LEU279 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (266) TRP280 0 0 0 0 0 0 0 0 0 0 0 57 0 0 0 0 0 0 0 0 0 0 chainE ( 29) ASP31 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU32 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ALA116 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (114) SER117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (264) LEU279 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) TRP280 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 38) GLU40 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 chainG ( 36) SER37 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLU40 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LYS41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (116) GLU120 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) THR121 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) GLN234 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) MET263 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ILE286 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dptllrikivpvqpfiansrkqldlwasshllsmlmykalevivdkfgpehviypslrdqpfflkfylgenigdeilvanlpnkalaivsgkeaekieeeikkrirdfllqlyreavdwavengvvkvdrsekdsmlkeaylkivreyftvsitwvslsekediyqvtenaglsrvleriaiypllvkildslgerkvteerfekseqlkgwkchvcgenlaifgdmydhdnlkslwldeeplcpmclikryypvwirsktgqkirfesvvdvallyknwrkifdekygkdlvskarevsedfvkdnmlvdsdlyysstweseekvkevvdflnaaykeignppkyyailvmdgdtpqvhvaisqalanfsirevrsvvkdeglliyaggddvlailpvdkalevaykirkefgksfklsagilivhykhplydalekardllnnkaknvpgkdtlaigllkrsgsyyislvgwelirvfynselrkkllegkRfiyhvlrevdtwpkvgidemlkfevirhirnkeetkelrekiygeikdllehvrgnnevekvrglftflkiitdaevfp/mievtftpydvllfresrpfdagsesvarsiiplpqtvagairtllfykglkncvgvgeeepeftlvgiaigtriyplpfniiksekfykvvnpgrflgklilppkgkyksgyvtesilekylkgelkeveenkviriekekrigiklsrekkvVeegmLytveflriekiyawiedpgcgikdilssyefltlggesrvafvevddktpdifnrelgstkkalfyfstptigkvgeivqelekrlnakiddyllvssrptaisgwdmhekkpkgtkfaippgsvlfvefkeevevppyiklgklkklgyglalggiwe/kavvfglysitpvhagsgaelsviDLpiqrerhtgfpviwgqslkgvlrsrfrqleldekievsqkwkwkektkevlkekadefikkveerkrdpllteivfgpatdgasehagavsvgdakillfpvrsakgvfafvtspiviqrlkedfelvsvelsnnetiagnalilngenkviledivlkvksdsnvienlvevlktlfgdnffgkpiesikeriaivsddvfksftrfsteivarVridaekgtVarggLWyeeflpsdtlmysliavgspkkenlpkevdntqkivnvlkvtfnnaflqiggdetvgkgfvkvra/mfdmfekavvfglysitpvhagsgaelsviDLpiqrerhtgfpviwgqslkgvlrsrfrqleldekieveqkwkwkektkevlkekadefikkveerkrdpllteivfgpatdgaSehagavsvgdakillfpvrsakgvfafvtspiviqrlkedfelvseiendielkkvelsnnetiagnalilngenkviledivlkvksvienlvevlktlfgdnffgkikeriaivsddvfksftrfsteivarvRidaekgtVarggLWyeeflpsdtlmysliavgspkklpkevdntqkivnvlkvtfnnaflqiggdetvgkgfvkvragv/dmfekavvfglysitpvhagsgaelsviDLpiqrerhtgfpviwgqslkgvlrsrfrqleldekievsqkwkwkektkevlkekadefikkveerkrdpllteivfgpatdgASehagavsvgdakillfpvrsakgvfafvtspiviqrlkedfelvseienvelsnnetiagnalilngenkviledivlkvksdsnvienlvevlktlfgdnffgkpiesikeriaivsddvfksftrfsteivarvridaekgtvarggLWyeeflpsdtlmysliavgspkklpkevdntqkivnvlkvtfnnaflqiggdetvgkgfvkvragv/ireieqerasfafkvvsdikdkysqnkkvqgkyssyaEkaptiilnnglgatlafflskliddvdyksinpesfgnaeniayaflykhlstwlaegngkdsafsgltngedplkyimektaidvaisteealsilnwikkfakaml/direieqerasfafkvvsdikdkysqnkkvqgkysSyaEKaptiilnnglgatlafflsklekpiddvdyksinpesfgnaeniayaflykhlstwlaegngkdsafsgltngedplkyimektaidvaisteealsilnwikkfakamlee/vvvkypvnselanyaekfwkkelaiynlslilnkmtpfvkrrsesyksslsavkeifknvddfqnflnsvlrrsldeyrvffenyerlfnsfsskifsmrtksrlvvglgdesvyETsirlhrnygvpyipgsalkgvakhyafsilarengdeilriyesvkedlkedyyltaaviqelfekkfdelgairntrveigdtvisvgdivkifgtQkeegsviffdafptpeqlkdkpnleldiMIffltvpagveftfavasrdlddlaekaekllkealkkfgvgaktslgygrfd >3x1l_D: title=CRYSTAL STRUCTURE OF THE CRISPR-CAS RNA SILENCING CMR COMPLEX BOUND TO A TARGET ANALOG organism=ARCHAEOGLOBUS FULGIDUS DSM 4304 DNA sequence DC(J10) DC(J11) DG(J12) DC(J13) DA(J14) DA(J15) DG(J16) DG(J17) DA(J18) DC(J19) DC(J20) DG(J21) DC(J22) DA(J23) DT(J24) DA(J25) DC(J26) DT(J27) DA(J28) DC(J29) DA(J30) DA(J31) chainD ( 31) ASP31 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 32) LEU32 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (116) SER117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (252) ARG266 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 (260) VAL274 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (265) LEU279 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (266) TRP280 0 0 0 0 0 0 0 0 0 0 0 57 0 0 0 0 0 0 0 0 0 0 prot.sequence mfdmfekavvfglysitpvhagsgaelsviDLpiqrerhtgfpviwgqslkgvlrsrfrqleldekieveqkwkwkektkevlkekadefikkveerkrdpllteivfgpatdgaSehagavsvgdakillfpvrsakgvfafvtspiviqrlkedfelvseiendielkkvelsnnetiagnalilngenkviledivlkvksvienlvevlktlfgdnffgkikeriaivsddvfksftrfsteivarvRidaekgtVarggLWyeeflpsdtlmysliavgspkklpkevdntqkivnvlkvtfnnaflqiggdetvgkgfvkvragv >3x1s_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DA(J147) chainA ( 1) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) LYS115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence HRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsrkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreIqtavrlllpgelakhavsegtkavtkytss/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihaKrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnysErvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >3x1s_B:Histone-fold; title=CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DA(J147) chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >3x1t_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE CONSISTING OF MOUSE TESTIS SPECIFIC HISTONE VARIANTS H2AA AND H2BA organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DA(J147):DT(I146) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/vksrssraglqfpvgrvhrllrqgnyaqRigagapvylaavleyltaevlelagnaardnkktritprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyiykvlkqvhpdtgisskamsImnsfvtdiferiaseasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/vksrssraglqfpvgrvhrllrqgnyaqRigagapvylaavleyltaevlelagnaardnkktRitprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/Rkesysiyiykvlkqvhpdtgisskamsimnsfvtdiferiaseasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >3x1t_G:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE CONSISTING OF MOUSE TESTIS SPECIFIC HISTONE VARIANTS H2AA AND H2BA organism=MUS MUSCULUS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DT(I146):DA(J147) chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vksrssraglqfpvgrvhrllrqgnyaqRigagapvylaavleyltaevlelagnaardnkktRitprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk >3x1t_H:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE CONSISTING OF MOUSE TESTIS SPECIFIC HISTONE VARIANTS H2AA AND H2BA organism=MUS MUSCULUS DNA sequence DA(J147):DT(I146) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainH ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Rkesysiyiykvlkqvhpdtgisskamsimnsfvtdiferiaseasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >3x1u_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE IN THE PRESENCE OF HISTONE VARIANTS INVOLVED IN REPROGRAMMING organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) LYS115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phryrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihaKrvtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkriSgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtLygfgg/vksrssraglqfpvgrvhrllrqgnyaQrigagapvylaavleyltaevlelagnaardnkktritprhlqlairndEelnkllgrvtiaqggvlpniqavllpk/srkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakHavsegtkavtkytssk/kphrYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/rakvksrssraglqfpvgrvhrllrqgnyaqRigagapvylaavleyltaevlelagnaardnkktritprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/srkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >3x1u_G:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE IN THE PRESENCE OF HISTONE VARIANTS INVOLVED IN REPROGRAMMING organism=? DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainG ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rakvksrssraglqfpvgrvhrllrqgnyaqRigagapvylaavleyltaevlelagnaardnkktritprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk >3x1v_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE IN THE PRESENCE OF HISTONE VARIANT INVOLVED IN REPROGRAMMING organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkrKrcRkesysIyiykvlkqvhpdtgisskamsimnsfvtdiferiaseasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/rakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/cRkesysiyiykvlkqvhpdtgisskamsimnsfvtdiferiaseasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >3x1v_G:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE IN THE PRESENCE OF HISTONE VARIANT INVOLVED IN REPROGRAMMING organism=? DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainG ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk >3zdb_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=STRUCTURE OF E. COLI EXOIX IN COMPLEX WITH THE PALINDROMIC 5OV4 DNA OLIGONUCLEOTIDE, DI-MAGNESIUM AND POTASSIUM organism=ESCHERICHIA COLI DNA sequence DA(X1) DA(X2) DA(X3) DA(X4) DG(X5) DC(X6) DG(X7) DT(X8) DA(X9) DC(X10) DG(X11) DC(X12) chainA (171) SER175 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence avhllivdalnlirrihavqgspcvetcqhaldqlimhsqpthavavfddssgwrhqrlpdykagrppmpeelhdempalraafeqrgvpcwstsgneaddlaatlavkvtqaghqativstdkgycqllsptlrirdyfqkrwldapfidkefgvqpqqlpdywglagiSsskvpgvagigpksatqllvefqslegiyenldavaekwrkklethkemaflcrdiarlqtdlhidgnlqqlrlv >3zdc_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=STRUCTURE OF E. COLI EXOIX IN COMPLEX WITH THE PALINDROMIC 5OV4 DNA OLIGONUCLEOTIDE, POTASSIUM AND CALCIUM organism=ESCHERICHIA COLI DNA sequence DA(X1) DA(X2) DA(X3) DA(X4) DG(X5) DC(X6) DG(X7) DT(X8) DA(X9) DC(X10) DG(X11) DC(X12) chainA (172) SER175 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence avhllivdalnlirrihavqgspcvetcqhaldqlimhsqpthavavfddessgwrhqrlpdykagrppmpeelhdempalraafeqrgvpcwstsgneaddlaatlavkvtqaghqativstdkgycqllsptlrirdyfqkrwldapfidkefgvqpqqlpdywglagiSsskvpgvagigpksatqllvefqslegiyenldavaekwrkklethkemaflcrdiarlqtdlhidgnlqqlrlv >3zdd_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=STRUCTURE OF E. COLI EXOIX IN COMPLEX WITH THE PALINDROMIC 5OV6 OLIGONUCLEOTIDE AND POTASSIUM organism=ESCHERICHIA COLI DNA sequence DT(B6) DG(B7) DG(B8) DC(B9) DG(B10) DT(B11) DA(B12) DC(B13) DG(B14) DC(B15) chainA (171) SER175 0 0 0 0 0 0 0 0 3 1 prot.sequence avhllivdalnlirrihavqgspcvetcqhaldqlimhsqpthavavfddrssgwrhqrlpdykagrppmpeelhdempalraafeqrgvpcwstgneaddlaatlavkvtqaghqativstdkgycqllsptlrirdyfqkrwldapfidkefgvqpqqlpdywglagiSsskvpgvagigpksatqllvefqslegiyenldavaekwrkklethkemaflcrdiarlqtdlhidgnlqqlrlvr >3zh2_AB:LDH_C-terminal_domain-like;NADP-binding_Rossmann-fold_domains; title=STRUCTURE OF PLASMODIUM FALCIPARUM LACTATE DEHYDROGENASE IN COMPLEX WITH A DNA APTAMER organism=PLASMODIUM FALCIPARUM DNA sequence DC(E1):DG(E27) DT(E2):DA(E26) DG(E3):DC(E25) DG(E4):DC(E24) DG(E5):DC(E23) DC(E6)xDG(E11) DG(E7):DA(E10) DG(E8) DT(E9)xDA(E22) DA(E12):DG(E21) DA(E13):DT(E20) DC(E14):DG(E19) DC(E15) DA(E16) DT(E17) DA(E18) chainA ( 32) PHE34 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 33) ASP35 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 ( 34) ILE36 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 ( 35) VAL37 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 65) TYR67 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 78) ALA80 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 82) LYS84 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 ( 83) ALA85 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 84) PRO86 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 ( 86) LYS88 0 0 0 0 4 4 0 0 6 0 0 0 0 0 0 0 ( 87) SER89 0 0 0 0 8 12 5 0 0 0 0 0 0 0 0 0 ( 88) ASP90 0 0 0 0 0 1 13 7 0 0 0 0 0 0 0 0 ( 89) LYS91 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 99) LEU101 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (103) ILE105 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (230) HIS232 0 0 0 0 0 0 0 0 0 0 0 6 0 0 6 7 chainB ( 34) ILE36 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 ( 35) VAL37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 ( 38) MET40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 65) TYR67 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 78) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 80) PHE82 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 ( 82) LYS84 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 97) ILE105 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 (100) GLU108 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence pkakivlvgsgmiggvmatlivqknlgdvvlFDIVknmphgkaldtshtnvmaysnckvsgsntYddlagadvvivtAgftKAPgKSDKewnrddllpLnnkImieigghikkncpnafiivvtnpvdvmvqllhqhsgvpknkiiglggvldtsrlkyyisqklnvcprdvnahivgahgnkmvllkryitvggiplqefinnklisdaeleaifdrtvntaleivnlHaspyvapaaaiiemaesylkdlkkvlicstllegqyghsdifggtpvvlgangveqvielqlnseekakfdeaiaetkrmkala/pkakivlvgsgmiggvmatlivqknlgdvvlfDIVknMphgkaldtshtnvmaysnckvsgsntYddlagadvvivtAgFtKaewnrddllplnnkImiEigghikkncpnafiivvtnpvdvmvqllhqhsgvpknkiiglggvldtsrlkyyisqklnvcprdvnahivgahgnkmvllkryitvggiplqefinnklisdaeleaifdrtvntaleivnlhaspyvapaaaiiemaesylkdlkkvlicstllegqyghsdifggtpvvlgangveqvielqlnseekakfdeaiaetkrmkala >3zh2_C:LDH_C-terminal_domain-like;NADP-binding_Rossmann-fold_domains; title=STRUCTURE OF PLASMODIUM FALCIPARUM LACTATE DEHYDROGENASE IN COMPLEX WITH A DNA APTAMER organism=PLASMODIUM FALCIPARUM DNA sequence DC(G1):DG(G27) DT(G2):DA(G26) DG(G3):DC(G25) DG(G4):DC(G24) DG(G5):DC(G23) DC(G6)xDG(G11) DG(G7):DA(G10) DG(G8) DT(G9)xDA(G22) DA(G12):DG(G21) DA(G13):DT(G20) DC(G14):DG(G19) DC(G15):DA(G18) DA(G16) DT(G17) chainC ( 33) PHE34 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 ( 35) ILE36 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 ( 36) VAL37 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 66) TYR67 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 79) ALA80 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 83) LYS84 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 ( 84) ALA85 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 85) PRO86 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 ( 87) LYS88 0 0 0 0 3 4 0 0 7 0 0 0 0 0 0 ( 88) SER89 0 0 0 0 9 12 5 0 0 0 0 0 0 0 0 ( 89) ASP90 0 0 0 0 0 1 14 7 0 0 0 0 0 0 0 ( 90) LYS91 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 ( 92) TRP93 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (100) LEU101 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (104) ILE105 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (231) HIS232 0 0 0 0 0 0 0 0 0 0 0 7 8 0 7 prot.sequence apkakivlvgsgmiggvmatlivqknlgdvvlFDIVknmphgkaldtshtnvmaysnckvsgsntYddlagadvvivtAgftKAPgKSDKeWnrddllpLnnkImieigghikkncpnafiivvtnpvdvmvqllhqhsgvpknkiiglggvldtsrlkyyisqklnvcprdvnahivgahgnkmvllkryitvggiplqefinnklisdaeleaifdrtvntaleivnlHaspyvapaaaiiemaesylkdlkkvlicstllegqyghsdifggtpvvlgangveqvielqlnseekakfdeaiaetkrmkala >3zh2_CD:LDH_C-terminal_domain-like;NADP-binding_Rossmann-fold_domains; title=STRUCTURE OF PLASMODIUM FALCIPARUM LACTATE DEHYDROGENASE IN COMPLEX WITH A DNA APTAMER organism=PLASMODIUM FALCIPARUM DNA sequence DC(G1):DG(G27) DT(G2):DA(G26) DG(G3):DC(G25) DG(G4):DC(G24) DG(G5):DC(G23) DC(G6)xDG(G11) DG(G7):DA(G10) DG(G8) DT(G9)xDA(G22) DA(G12):DG(G21) DA(G13):DT(G20) DC(G14):DG(G19) DC(G15):DA(G18) DA(G16) DT(G17) chainC ( 33) PHE34 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 ( 35) ILE36 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 ( 36) VAL37 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 66) TYR67 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 79) ALA80 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 83) LYS84 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 ( 84) ALA85 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 85) PRO86 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 ( 87) LYS88 0 0 0 0 3 4 0 0 7 0 0 0 0 0 0 ( 88) SER89 0 0 0 0 9 12 5 0 0 0 0 0 0 0 0 ( 89) ASP90 0 0 0 0 0 1 14 7 0 0 0 0 0 0 0 ( 90) LYS91 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 ( 92) TRP93 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (100) LEU101 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (104) ILE105 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (231) HIS232 0 0 0 0 0 0 0 0 0 0 0 7 8 0 7 chainD ( 34) ILE36 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 ( 35) VAL37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 ( 38) MET40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 65) TYR67 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 78) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 80) PHE82 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 ( 82) LYS84 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 (100) ILE105 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 (103) GLU108 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence apkakivlvgsgmiggvmatlivqknlgdvvlFDIVknmphgkaldtshtnvmaysnckvsgsntYddlagadvvivtAgftKAPgKSDKeWnrddllpLnnkImieigghikkncpnafiivvtnpvdvmvqllhqhsgvpknkiiglggvldtsrlkyyisqklnvcprdvnahivgahgnkmvllkryitvggiplqefinnklisdaeleaifdrtvntaleivnlHaspyvapaaaiiemaesylkdlkkvlicstllegqyghsdifggtpvvlgangveqvielqlnseekakfdeaiaetkrmkala/pkakivlvgsgmiggvmatlivqknlgdvvlfdIVknMphgkaldtshtnvmaysnckvsgsntYddlagadvvivtAgFtKapdkewnrddllplnnkImiEigghikkncpnafiivvtnpvdvmvqllhqhsgvpknkiiglggvldtsrlkyyisqklnvcprdvnahivgahgnkmvllkryitvggiplqefinnklisdaeleaifdrtvntaleivnlhaspyvapaaaiiemaesylkdlkkvlicstllegqyghsdifggtpvvlgangveqvielqlnseekakfdeaiaetkrmkala >3zhm_A:lambda_repressor-like_DNA-binding_domains; title=N-TERMINAL DOMAIN OF THE CI REPRESSOR FROM BACTERIOPHAGE TP901-1 IN COMPLEX WITH THE OL2 OPERATOR HALF-SITE organism=LACTOCOCCUS PHAGE TP901-1 DNA sequence DA(B31):DT(C10) DG(B32):DC(C9) DT(B33):DA(C8) DT(B34):DA(C7) DC(B35):DG(C6) DA(B36):DT(C5) DC(B37):DG(C4) DG(B38):DC(C3) DT(B39):DA(C2) chainA ( 39) LYS40 3 11 2 0 0 0 0 0 0 ( 40) SER41 0 0 1 5 9 3 0 0 0 ( 41) THR42 0 0 0 0 0 4 0 0 0 ( 43) SER44 0 0 4 0 0 0 0 0 0 ( 44) GLN45 0 0 0 2 4 3 0 0 0 ( 50) GLN51 0 0 0 0 0 0 6 6 0 prot.sequence ktdtsnrlkqimaernlkqvdilnlsipfqkkfgiklsKSTlSQyvnsvQspdqnriyllaktlgvseawlmgrshhhh >3zi5_A: title=CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE BFII C-TERMINAL RECOGNITION DOMAIN IN COMPLEX WITH COGNATE DNA organism=BACILLUS FIRMUS DNA sequence DA(B1):DT(C12) DG(B2):DC(C11) DC(B3):DG(C10) DA(B4):DT(C9) DC(B5):DG(C8) DT(B6):DA(C7) DG(B7):DC(C6) DG(B8):DC(C5) DG(B9):DC(C4) DT(B10):DA(C3) DC(B11):DG(C2) DG(B12):DC(C1) chainA ( 16) ALA208 0 0 0 0 0 0 1 0 0 0 0 0 ( 20) ARG212 0 0 0 0 6 5 0 0 0 0 0 0 ( 31) GLN223 0 0 0 2 0 0 0 0 0 0 0 0 ( 33) THR225 0 0 7 8 5 0 0 0 0 0 0 0 ( 35) TYR227 0 0 0 2 5 0 0 0 0 0 0 0 ( 37) TRP229 0 0 0 0 0 0 11 2 0 0 0 0 ( 55) ARG247 0 0 1 6 0 0 0 0 0 0 0 0 ( 84) GLU276 0 0 0 0 0 3 0 0 0 0 0 0 ( 87) ASN279 0 0 0 0 0 2 8 0 0 0 0 0 ( 88) ASN280 0 0 0 0 0 0 6 9 3 0 0 0 ( 89) PHE281 0 0 0 0 0 0 0 0 0 2 0 0 ( 90) ASP282 0 0 0 0 0 0 4 9 6 0 0 0 ( 92) ARG284 0 0 0 0 3 11 5 0 0 0 0 0 ( 99) ARG291 0 0 2 0 0 0 0 0 0 0 0 0 (145) ASN337 0 0 0 0 0 0 0 0 0 3 5 0 prot.sequence ldetervtlivtlghAdtaRiqaapgttagQgTqYfWlskdsydffppltirnrRgtkatysslinmnyidinytdtqcrvtfEaeNNFDfRlgtgklRytgvaksndiaaitrvgdsdyelriikqgtpehsqldpyavsfigNrgkrfgyisneefgriigvtf >3zkc_A:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE MASTER REGULATOR FOR BIOFILM FORMATION SINR IN COMPLEX WITH DNA. organism=BACILLUS SUBTILIS DNA sequence DA(C2):DT(D21) DA(C3):DT(D20) DG(C4):DC(D19) DT(C5):DA(D18) DT(C6):DA(D17) DC(C7):DG(D16) DT(C8):DA(D15) DC(C9):DG(D14) DT(C10):DA(D13) DT(C11):DA(D12) DT(C12):DA(D11) DA(C13):DT(D10) DA(C15):DT(D8) DG(C16):DC(D7) DA(C17):DT(D6) DA(C18):DT(D5) DC(C19):DG(D4) DA(C20):DT(D3) DA(C21):DT(D2) chainA ( 17) SER18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 26) ALA27 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 13 0 0 ( 28) SER29 0 0 0 0 0 0 0 0 0 0 0 0 1 9 11 2 0 0 0 ( 29) TYR30 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 ( 35) ARG36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 38) GLN39 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence igqrikqyrkekgyslSelaekagvAKSYlSsieRnlQtnpsiqflekvsavldvsvhtll >3zkc_AB:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE MASTER REGULATOR FOR BIOFILM FORMATION SINR IN COMPLEX WITH DNA. organism=BACILLUS SUBTILIS DNA sequence DT(D2):DA(C21) DT(D3):DA(C20) DG(D4):DC(C19) DT(D5):DA(C18) DT(D6):DA(C17) DC(D7):DG(C16) DT(D8):DA(C15) DT(D10):DA(C13) DA(D11):DT(C12) DA(D12):DT(C11) DA(D13):DT(C10) DG(D14):DC(C9) DA(D15):DT(C8) DG(D16):DC(C7) DA(D17):DT(C6) DA(D18):DT(C5) DC(D19):DG(C4) DT(D20):DA(C3) DT(D21):DA(C2) chainA ( 17) SER18 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA27 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 13 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER29 0 0 0 2 11 9 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) TYR30 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) ARG36 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN39 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 chainB ( 18) SER18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 ( 27) ALA27 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 28) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 1 0 ( 29) SER29 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 1 0 0 0 ( 30) TYR30 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 32) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 36) ARG36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 39) GLN39 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 prot.sequence igqrikqyrkekgyslSelaekagvAKSYlSsieRnlQtnpsiqflekvsavldvsvhtll/migqrikqyrkekgyslSelaekagvAKSYlSsieRnlQtnpsiqflekvsavldvsvhtlld >3zlj_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF FULL-LENGTH E.COLI DNA MISMATCH REPAIR PROTEIN MUTS D835R MUTANT IN COMPLEX WITH GT MISMATCHED DNA organism=ESCHERICHIA COLI K-12 DNA sequence DA(F5):DT(E17) DC(F6):DG(E16) DT(F7):DA(E15) DG(F8):DC(E14) DG(F9):DC(E13) DT(F10):DA(E12) DG(F11):DC(E11) DC(F12):DG(E10) DT(F13):DG(E9) DT(F14):DA(E8) DG(F15):DC(E7) DG(F16):DC(E6) DC(F17):DG(E5) DA(F18):DT(E4) DG(F19):DC(E3) DC(F20):DG(E2) DT(F21):DA(E1) chainA ( 32) MET33 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 0 49 20 0 0 0 0 0 0 0 ( 37) GLU38 0 0 0 0 0 0 0 5 13 0 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 chainB prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgdFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldfmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/eillfyrmgdfyelfyddakrasqlldisavEnyLaKlvnqgesvaiceerkvvriVtpgtisdeaLlqeRqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgaaddlasgrstfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >3zp5_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING ETS DOMAIN OF THE HUMAN PROTEIN FEV IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DC(C1):DG(G10) DA(C2):DT(G9) DC(C3):DG(G8) DT(C4):DA(G7) DT(C5):DA(G6) DC(C6):DG(G5) DC(C7):DG(G4) DG(C8):DC(G3) DG(C9):DC(G2) DT(C10):DA(G1) chainA ( 1) SER44 4 0 0 0 0 0 0 0 0 0 ( 56) ASP99 0 0 0 0 0 1 6 1 0 0 ( 57) LYS100 0 0 0 0 3 0 0 0 0 0 ( 60) ARG103 0 0 0 1 9 16 21 0 0 0 ( 63) ARG106 0 0 0 0 0 0 13 14 0 0 ( 64) TYR107 0 1 6 0 0 0 0 0 0 0 prot.sequence SgqiqlwqfllelladranagciawegghgefkltdpdevarrwgerkskpnmnyDKlsRalRYyydknimskvhgkryayrfdfqglaqac >3zpl_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF SCO3205, A MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM STREPTOMYCES COELICOLOR, IN COMPLEX WITH DNA organism=STREPTOMYCES COELICOLOR DNA sequence DA(C1):DT(D22) DA(C2):DT(D21) DA(C3):DT(D20) DG(C4):DC(D19) DA(C5):DT(D18) DT(C6):DA(D17) DT(C7):DA(D16) DG(C8):DC(D15) DA(C9):DT(D14) DG(C10):DC(D13) DA(C11):DT(D12) DT(C12):DA(D11) DC(C13):DG(D10) DT(C14):DA(D9) DC(C15):DG(D8) DA(C16):DT(D7) DA(C17):DT(D6) DT(C18):DA(D5) DC(C19):DG(D4) DT(C20):DA(D3) DT(C21):DA(D2) DT(C22):DA(D1) chainA ( 68) ARG72 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER73 0 0 0 0 0 2 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG74 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) SER76 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) HIS77 0 0 0 0 0 0 10 9 7 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG98 0 6 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 68) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 5 0 0 0 ( 69) SER73 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 7 2 0 0 0 0 0 ( 70) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 72) SER76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 ( 73) HIS77 0 0 0 0 0 0 0 0 0 0 0 0 1 8 10 8 0 0 0 0 0 0 ( 94) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 6 0 prot.sequence prwltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpseagadlpwlr/prwltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpseagadlpwlr >3zpl_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF SCO3205, A MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM STREPTOMYCES COELICOLOR, IN COMPLEX WITH DNA organism=STREPTOMYCES COELICOLOR DNA sequence DA(D1):DT(C22) DA(D2):DT(C21) DA(D3):DT(C20) DG(D4):DC(C19) DA(D5):DT(C18) DT(D6):DA(C17) DT(D7):DA(C16) DG(D8):DC(C15) DA(D9):DT(C14) DG(D10):DC(C13) DA(D11):DT(C12) DT(D12):DA(C11) DC(D13):DG(C10) DT(D14):DA(C9) DC(D15):DG(C8) DA(D16):DT(C7) DA(D17):DT(C6) DT(D18):DA(C5) DC(D19):DG(C4) DT(D20):DA(C3) DT(D21):DA(C2) DT(D22):DA(C1) chainB ( 68) ARG72 0 0 0 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER73 0 0 0 0 0 2 7 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG74 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) SER76 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) HIS77 0 0 0 0 0 0 8 10 8 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG98 0 6 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence prwltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpseagadlpwlr >3zpl_EF:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF SCO3205, A MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM STREPTOMYCES COELICOLOR, IN COMPLEX WITH DNA organism=STREPTOMYCES COELICOLOR DNA sequence DA(G1):DT(H22) DA(G2):DT(H21) DA(G3):DT(H20) DG(G4):DC(H19) DA(G5):DT(H18) DT(G6):DA(H17) DT(G7):DA(H16) DG(G8):DC(H15) DA(G9):DT(H14) DG(G10):DC(H13) DA(G11):DT(H12) DT(G12):DA(H11) DC(G13):DG(H10) DT(G14):DA(H9) DC(G15):DG(H8) DA(G16):DT(H7) DA(G17):DT(H6) DT(G18):DA(H5) DC(G19):DG(H4) DT(G20):DA(H3) DT(G21):DA(H2) DT(G22):DA(H1) chainE ( 71) ARG72 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) SER73 0 0 0 0 0 2 6 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) SER76 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) HIS77 0 0 0 0 0 0 10 9 9 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ARG98 0 7 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 66) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 2 0 0 0 ( 67) SER73 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 7 3 0 0 0 0 0 ( 68) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 70) SER76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 ( 71) HIS77 0 0 0 0 0 0 0 0 0 0 0 0 1 8 10 10 0 0 0 0 0 0 ( 92) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 7 0 prot.sequence ndeprwltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpseadlpwlr/wltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpsedlpwlr >3zqc_A:Homeodomain-like; title=STRUCTURE OF THE TRICHOMONAS VAGINALIS MYB3 DNA-BINDING DOMAIN BOUND TO A PROMOTER SEQUENCE REVEALS A UNIQUE C-TERMINAL BETA-HAIRPIN CONFORMATION organism=TRICHOMONAS VAGINALIS DNA sequence DA(B1):DT(C32) DA(B2):DT(C31) DG(B3):DC(C30) DA(B4):DT(C29) DT(B5):DA(C28) DA(B6):DT(C27) DA(B7):DT(C26) DC(B8):DG(C25) DG(B9):DC(C24) DA(B10):DT(C23) DT(B11):DA(C22) DA(B12):DT(C21) DT(B13):DA(C20) DT(B14):DA(C19) DT(B15):DA(C18) DA(B16):DT(C17) chainA ( 38) LYS89 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 ( 41) ARG92 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 ( 42) GLU93 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 0 ( 88) ASP139 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 89) ASN140 0 0 0 0 0 2 8 1 0 0 0 0 0 0 0 0 ( 92) LYS143 0 0 0 0 0 0 5 10 5 0 0 0 0 0 0 0 ( 93) ASN144 0 0 0 0 14 7 0 0 0 0 0 0 0 0 0 0 ( 96) ASN147 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 97) SER148 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkgpfteaeddlireyvkengpqnwpritsflpnrspKqcRErwfnhldpavvkhawtpeedetifrnylklgskwsviaklipgrtDNaiKNrwNSsiskristnsnhkeillpdrs >3zql_AB:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=DNA-BOUND FORM OF TETR-LIKE REPRESSOR SIMR organism=STREPTOMYCES ANTIBIOTICUS DNA sequence DT(F1):DA(E17) DT(F2):DA(E16) DC(F3):DG(E15) DG(F4):DC(E14) DT(F5):DA(E13) DA(F6):DT(E12) DC(F7):DG(E11) DG(F8):DC(E10) DG(F9):DC(E9) DC(F10):DG(E8) DG(F11):DC(E7) DT(F12):DA(E6) DA(F13):DT(E5) DC(F14):DG(E4) DG(F15):DC(E3) DA(F16):DT(E2) DA(F17):DT(E1) chainA ( 44) MET50 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG51 0 0 0 0 0 8 8 10 0 0 0 0 0 0 0 0 0 ( 55) THR61 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 56) MET62 0 0 4 8 10 7 0 0 0 0 0 0 0 0 0 0 0 ( 57) SER63 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) TYR65 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 ( 60) TYR66 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 34) MET50 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 35) ARG51 0 0 0 0 0 0 0 0 0 10 9 8 0 0 0 0 0 ( 45) THR61 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 46) MET62 0 0 0 0 0 0 0 0 0 0 0 7 10 7 3 0 0 ( 47) SER63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 49) TYR65 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 ( 50) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 prot.sequence vsiwmhpepagrrsarshrtlsrdqivraavkvadtegveaasMRrvaaelgagTMSlYYyvptkedlvelmvdevigetrlpdrpgpdwraaltlaanekralwlrhpwlatawrnghpvwgpnslrqqefvlgtlgvfdlqvdellsliglyngyvesfvrnevgwleearrtkvdmrewmrrsgpyaqqlvdsgeypmfarvlaetvaphmgpdqrfrsglerlldsigasld/vsiwmhpeptlsrdqivraavkvadtegveaasMRrvaaelgagTMSlYYyvptkedlvelmvdevigetrlpdrpgpdwraaltlaanekralwlrhpwlatawrnghpvwgpnslrqqefvlgtlgvfdlqvdellsliglyngyvesfvrnevgwleearrtkvdmrewmrrsgpyaqqlvdsgeypmfarvlaetvaphmgpdqrfrsglerlldsigasld >3zql_B:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=DNA-BOUND FORM OF TETR-LIKE REPRESSOR SIMR organism=STREPTOMYCES ANTIBIOTICUS DNA sequence DT(F1):DA(E17) DT(F2):DA(E16) DC(F3):DG(E15) DG(F4):DC(E14) DT(F5):DA(E13) DA(F6):DT(E12) DC(F7):DG(E11) DG(F8):DC(E10) DG(F9):DC(E9) DC(F10):DG(E8) DG(F11):DC(E7) DT(F12):DA(E6) DA(F13):DT(E5) DC(F14):DG(E4) DG(F15):DC(E3) DA(F16):DT(E2) DA(F17):DT(E1) chainB ( 34) MET50 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 35) ARG51 0 0 0 0 0 0 0 0 0 10 9 8 0 0 0 0 0 ( 45) THR61 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 46) MET62 0 0 0 0 0 0 0 0 0 0 0 7 10 7 3 0 0 ( 47) SER63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 49) TYR65 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 ( 50) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 prot.sequence vsiwmhpeptlsrdqivraavkvadtegveaasMRrvaaelgagTMSlYYyvptkedlvelmvdevigetrlpdrpgpdwraaltlaanekralwlrhpwlatawrnghpvwgpnslrqqefvlgtlgvfdlqvdellsliglyngyvesfvrnevgwleearrtkvdmrewmrrsgpyaqqlvdsgeypmfarvlaetvaphmgpdqrfrsglerlldsigasld >3zql_CD:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=DNA-BOUND FORM OF TETR-LIKE REPRESSOR SIMR organism=STREPTOMYCES ANTIBIOTICUS DNA sequence DT(H1):DA(G17) DT(H2):DA(G16) DC(H3):DG(G15) DG(H4):DC(G14) DT(H5):DA(G13) DA(H6):DT(G12) DC(H7):DG(G11) DG(H8):DC(G10) DG(H9):DC(G9) DC(H10):DG(G8) DG(H11):DC(G7) DT(H12):DA(G6) DA(H13):DT(G5) DC(H14):DG(G4) DG(H15):DC(G3) DA(H16):DT(G2) DA(H17):DT(G1) chainC ( 44) MET50 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG51 0 0 0 0 0 8 9 10 0 0 0 0 0 0 0 0 0 ( 55) THR61 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 56) MET62 0 0 4 5 7 7 0 0 0 0 0 0 0 0 0 0 0 ( 57) SER63 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) TYR65 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 ( 60) TYR66 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 34) MET50 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 35) ARG51 0 0 0 0 0 0 0 0 0 9 9 8 0 0 0 0 0 ( 45) THR61 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 46) MET62 0 0 0 0 0 0 0 0 0 0 0 7 8 7 4 0 0 ( 47) SER63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 49) TYR65 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 ( 50) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 prot.sequence vsiwmhpepagrrsarshrtlsrdqivraavkvadtegveaasMRrvaaelgagTMSlYYyvptkedlvelmvdevigetrlpdrpgpdwraaltlaanekralwlrhpwlatawrnghpvwgpnslrqqefvlgtlgvfdlqvdellsliglyngyvesfvrnevgwleearrtkvdmrewmrrsgpyaqqlvdsgeypmfarvlaetvaphmgpdqrfrsglerlldsigasld/vsiwmhpeptlsrdqivraavkvadtegveaasMRrvaaelgagTMSlYYyvptkedlvelmvdevigetrlpdrpgpdwraaltlaanekralwlrhpwlatawrnghpvwgpnslrqqefvlgtlgvfdlqvdellsliglyngyvesfvrnevgwleearrtkvdmrewmrrsgpyaqqlvdsgeypmfarvlaetvaphmgpdqrfrsglerlldsigasld >3zvk_EFGH:AbrB/MazE/MraZ-like; title=CRYSTAL STRUCTURE OF VAPBC2 FROM RICKETTSIA FELIS BOUND TO A DNA FRAGMENT FROM THEIR PROMOTER organism=RICKETTSIA FELIS DNA sequence DA(X2):DT(Y26) DG(X3):DC(Y25) DT(X4):DA(Y24) DA(X5):DT(Y23) DT(X6):DA(Y22) DA(X7):DT(Y21) DT(X8):DA(Y20) DA(X9):DT(Y19) DT(X10):DA(Y18) DT(X11):DA(Y17) DA(X12):DT(Y16) DA(X13):DT(Y15) DT(X14):DA(Y14) DT(X15):DA(Y13) DA(X16):DT(Y12) DG(X17):DC(Y11) DT(X18):DA(Y10) DA(X19):DT(Y9) DT(X20):DA(Y8) DA(X21):DT(Y7) DT(X22):DA(Y6) DA(X23):DT(Y5) DT(X24):DA(Y4) DT(X25):DA(Y3) DA(X26):DT(Y2) DA(X27):DT(Y1) chainE ( 6) PHE7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 8) ASN9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 5 0 0 0 0 0 0 0 ( 10) GLN11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 ( 11) SER12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 ( 15) ARG16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 chainF ( 7) PHE7 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ASN9 0 0 3 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) GLN11 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) SER12 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG16 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 6) PHE7 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ASN9 0 0 0 0 0 5 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) GLN11 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) SER12 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG16 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 7) PHE7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 9) ASN9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 3 0 0 0 0 ( 11) GLN11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 ( 12) SER12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 ( 16) ARG16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 prot.sequence nkakiFmNgQSqavRlpkefrfsvkevsviplgkgivlqplpnswkdvfqemaeiss/mnkakiFmNgQSqavRlpkefrfsvkevsviplgkgivlqplpnswkdvfqemaeissddifpegrkdlppqkrkyfe/nkakiFmNgQSqavRlpkefrfsvkevsviplgkgivlqplpnswkdvfqemaeissddifpegrkdlppqkrkyfe/mnkakiFmNgQSqavRlpkefrfsvkevsviplgkgivlqplpnswkdvfqemaeis >3zvk_G:AbrB/MazE/MraZ-like; title=CRYSTAL STRUCTURE OF VAPBC2 FROM RICKETTSIA FELIS BOUND TO A DNA FRAGMENT FROM THEIR PROMOTER organism=RICKETTSIA FELIS DNA sequence DA(X2):DT(Y26) DG(X3):DC(Y25) DT(X4):DA(Y24) DA(X5):DT(Y23) DT(X6):DA(Y22) DA(X7):DT(Y21) DT(X8):DA(Y20) DA(X9):DT(Y19) DT(X10):DA(Y18) DT(X11):DA(Y17) DA(X12):DT(Y16) DA(X13):DT(Y15) DT(X14):DA(Y14) DT(X15):DA(Y13) DA(X16):DT(Y12) DG(X17):DC(Y11) DT(X18):DA(Y10) DA(X19):DT(Y9) DT(X20):DA(Y8) DA(X21):DT(Y7) DT(X22):DA(Y6) DA(X23):DT(Y5) DT(X24):DA(Y4) DT(X25):DA(Y3) DA(X26):DT(Y2) DA(X27):DT(Y1) chainG ( 6) PHE7 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ASN9 0 0 0 0 0 5 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) GLN11 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) SER12 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG16 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nkakiFmNgQSqavRlpkefrfsvkevsviplgkgivlqplpnswkdvfqemaeissddifpegrkdlppqkrkyfe >4a04_AB:p53-like_transcription_factors; title=STRUCTURE OF THE DNA-BOUND T-BOX DOMAIN OF HUMAN TBX1, A TRANSCRIPTION FACTOR ASSOCIATED WITH THE DIGEORGE SYNDROME organism=HOMO SAPIENS DNA sequence DA(E2):DT(D23) DT(E3):DA(D22) DT(E4):DA(D21) DT(E5):DA(D20) DC(E6):DG(D19) DA(E7):DT(D18) DC(E8):DG(D17) DA(E9):DT(D16) DC(E10):DG(D15) DC(E11):DG(D14) DT(E12):DA(D13) DA(E13):DT(D12) DG(E14):DC(D11) DG(E15):DC(D10) DT(E16):DA(D9) DG(E17):DC(D8) DT(E18):DA(D7) DG(E19):DC(D6) DA(E20):DT(D5) DA(E21):DT(D4) DA(E22):DT(D3) DT(E23):DA(D2) chainA ( 29) ARG137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 (158) THR274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 (159) ALA275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (175) PHE291 0 0 0 0 0 0 0 0 0 0 0 1 3 4 0 0 0 0 0 0 0 0 (179) PHE295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 chainB ( 30) ARG137 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) THR274 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ALA275 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) PHE291 0 0 0 0 0 0 0 0 3 3 3 0 0 0 0 0 0 0 0 0 0 0 (188) PHE295 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvsvqlemkalwdefnqlgtemivtkagRrmfptfqvklfgmdpmadymllmdfvpvddkryryafhssswlvagkadpatpgrvhyhpdspakgaqwmkqivsfdklkltnnllddnghiilnsmhryqprfhvvyvdprenfktfvfeetrftavTAyqnhritqlkiasnpFakgFrd/ggvsvqlemkalwdefnqlgtemivtkagRrmfptfqvklfgmdpmadymllmdfvpvddkryryafhssswlvagkadpatpgrvhyhpdspakgaqwmkqivsfdklkltnnllddnghiilnsmhryqprfhvvyvdprkdsekyaeenfktfvfeetrftavTAyqnhritqlkiasnpFakgFrd >4a04_B:p53-like_transcription_factors; title=STRUCTURE OF THE DNA-BOUND T-BOX DOMAIN OF HUMAN TBX1, A TRANSCRIPTION FACTOR ASSOCIATED WITH THE DIGEORGE SYNDROME organism=HOMO SAPIENS DNA sequence DA(D2):DT(E23) DT(D3):DA(E22) DT(D4):DA(E21) DT(D5):DA(E20) DC(D6):DG(E19) DA(D7):DT(E18) DC(D8):DG(E17) DA(D9):DT(E16) DC(D10):DG(E15) DC(D11):DG(E14) DT(D12):DA(E13) DA(D13):DT(E12) DG(D14):DC(E11) DG(D15):DC(E10) DT(D16):DA(E9) DG(D17):DC(E8) DT(D18):DA(E7) DG(D19):DC(E6) DA(D20):DT(E5) DA(D21):DT(E4) DA(D22):DT(E3) DT(D23):DA(E2) chainB ( 30) ARG137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 (167) THR274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 (168) ALA275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (184) PHE291 0 0 0 0 0 0 0 0 0 0 0 3 3 3 0 0 0 0 0 0 0 0 (188) PHE295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 prot.sequence ggvsvqlemkalwdefnqlgtemivtkagRrmfptfqvklfgmdpmadymllmdfvpvddkryryafhssswlvagkadpatpgrvhyhpdspakgaqwmkqivsfdklkltnnllddnghiilnsmhryqprfhvvyvdprkdsekyaeenfktfvfeetrftavTAyqnhritqlkiasnpFakgFrd >4a08_B:WD40_repeat-like; title=STRUCTURE OF HSDDB1-DRDDB2 BOUND TO A 13 BP CPD-DUPLEX (PURINE AT D-1 POSITION) AT 3.0 A RESOLUTION (CPD 1) organism=DANIO RERIO DNA sequence DC(G2):DG(H14) DG(G3):DC(H13) DC(G4):DG(H12) DG(G5):DC(H11) DA(G6):DT(H10) TTD(G7):DC(H9) DG(G9):DC(H8) DC(G10):DC(H7) DG(G11):DG(H6) DC(G12):DC(H5) chainB ( 66) LYS168 0 0 0 0 0 2 0 0 0 0 (135) ASP237 0 0 0 0 0 3 0 0 0 0 (137) TRP239 0 0 0 0 0 4 0 0 0 0 (269) PHE371 0 0 0 0 32 4 15 0 0 0 (270) GLN372 0 0 0 0 0 2 43 0 0 0 (271) HIS373 0 0 0 0 98 0 0 0 0 0 prot.sequence tsilhyiyksslgqsihaqlrqclqepfirslksyklhrtaspfdrrvtslewhpthpttvavgskggdiilwdydvqnktsfiqgmgpgdaitgmkfnqfntnqlfvssirgattlrdfsgsviqvfaktdswdywyccvdvsvsrqmlatgdstgrllllgldgheifkeklhkakvthaefnprcdwlmatssvdatvklwdlrnikdknsyiaemphekpvnaayfnptdstkllttdqrneirvyssydwskpdqiiihphrqFQHltpikatwhpmydlivagrypddqlllndkrtidiydansgglvhqlrdpnaagiislnkfsptgdvlasgmgfniliwnre >4a09_B:WD40_repeat-like; title=STRUCTURE OF HSDDB1-DRDDB2 BOUND TO A 15 BP CPD-DUPLEX (PURINE AT D-1 POSITION) AT 3.1 A RESOLUTION (CPD 2) organism=DANIO RERIO DNA sequence DG(G1):DC(H14) DG(G2):DA(H13) DT(G3):DC(H12) DG(G4):DT(H11) DA(G5):DT(H10) DA(G6):DT(H9) DA(G7):DC(H8) TTD(G8):DC(H7) DA(G10):DT(H6) DG(G11):DC(H5) DC(G12):DG(H4) DA(G13):DT(H3) DG(G14):DC(H2) DG(G15):DC(H1) chainB ( 67) LYS168 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (112) ILE213 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (113) ARG214 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (135) TRP236 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (138) TRP239 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (270) PHE371 0 0 0 0 0 26 4 12 0 0 0 0 0 0 (271) GLN372 0 0 0 0 0 0 0 8 31 0 0 0 0 0 (272) HIS373 0 0 0 0 0 4 86 0 0 0 0 0 0 0 prot.sequence qtsilhyiyksslgqsihaqlrqclqepfirslksyklhrtaspfdrrvtslewhpthpttvavgskggdiilwdydvqnktsfiqgmgpgdaitgmkfnqfntnqlfvssirgattlrdfsgsviqvfaktdswdywyccvdvsvsrqmlatgdstgrllllgldgheifkeklhkakvthaefnprcdwlmatssvdatvklwdlrnikdknsyiaemphekpvnaayfnptdstkllttdqrneirvyssydwskpdqiiihphrqFQHltpikatwhpmydlivagrypddqlllndkrtidiydansgglvhqlrdpnaagiislnkfsptgdvlasgmgfniliwnre >4a0a_B:WD40_repeat-like; title=STRUCTURE OF HSDDB1-DRDDB2 BOUND TO A 16 BP CPD-DUPLEX (PYRIMIDINE AT D-1 POSITION) AT 3.6 A RESOLUTION (CPD 3) organism=DANIO RERIO DNA sequence DC(D1):DG(C16) DC(D2):DG(C15) DT(D3):DA(C14) DG(D4):DC(C13) DC(D5):DG(C12) DT(D6):DA(C11) DC(D7):TTD(C9) DC(D8):DT(C8) DA(D9):DA(C7) DT(D10):DA(C6) DT(D11):DG(C5) DC(D12):DT(C4) DA(D13):DG(C3) DC(D14):DG(C2) DC(D15):DG(C1) chainB ( 48) ARG148 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 68) LYS168 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (113) ILE213 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (114) ARG214 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (136) TRP236 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 (139) TRP239 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (271) PHE371 0 0 0 0 0 0 15 4 11 0 0 0 0 0 0 (272) GLN372 0 0 0 0 0 66 11 0 0 0 0 0 0 0 0 (273) HIS373 0 0 0 0 0 0 0 24 21 0 0 0 0 0 0 prot.sequence gqtsilhyiyksslgqsihaqlrqclqepfirslksyklhrtaspfdRrvtslewhpthpttvavgskggdiilwdydvqnktsfiqgmgpgdaitgmkfnqfntnqlfvssirgattlrdfsgsviqvfaktdswdywyccvdvsvsrqmlatgdstgrllllgldgheifkeklhkakvthaefnprcdwlmatssvdatvklwdlrnikdknsyiaemphekpvnaayfnptdstkllttdqrneirvyssydwskpdqiiihphrqFQHltpikatwhpmydlivagrypddqlllndkrtidiydansgglvhqlrdpnaagiislnkfsptgdvlasgmgfniliwnre >4a0b_AD:WD40_repeat-like; title=STRUCTURE OF HSDDB1-DRDDB2 BOUND TO A 16 BP CPD-DUPLEX (PYRIMIDINE AT D-1 POSITION) AT 3.8 A RESOLUTION (CPD 4) organism=DANIO RERIO / HOMO SAPIENS DNA sequence DG(I3):DC(J14) DT(I4):DA(J13) DG(I5):DC(J12) DA(I6):DT(J11) DA(I7):DT(J10) DT(I8):DA(J9) TTD(I9):DC(J8) DA(I11):DC(J7) DG(I12):DT(J6) DC(I13):DC(J5) DA(I14):DG(J4) DG(I15):DT(J3) chainA (195) ARG198 0 0 0 0 0 0 0 0 0 0 0 5 chainD ( 68) LYS168 0 0 0 0 0 0 3 0 0 0 0 0 (113) ILE213 0 0 0 0 0 0 1 0 0 0 0 0 (114) ARG214 0 0 0 0 0 0 6 0 0 0 0 0 (136) TRP236 0 0 0 0 0 0 1 0 0 0 0 0 (137) ASP237 0 0 0 0 0 0 6 0 0 0 0 0 (139) TRP239 0 0 0 0 0 0 6 0 0 0 0 0 (271) PHE371 0 0 0 0 0 32 4 8 0 0 0 0 (272) GLN372 0 0 0 0 0 0 3 32 0 0 0 0 (273) HIS373 0 0 0 0 0 82 0 0 0 0 0 0 prot.sequence nyvvtaqkptavngcvtghftsaedlnlliakntrleiyvvtaeglrpvkevgmygkiavmelfrpkgeskdllfiltakynacileykqsgesidiitrahgnvqdrigrpsetgiigiidpecrmiglrlydglfkvipldrdnkelkafnirleelhvidvkflygcqapticfvyqdpqgrhvktyevslRekefnkgpwkqenveaeasmviavpspfggaiiigqesityhngdkylaiappiikqstivchnrvdpngsryllgdmegrlfmlllekeeqvtlkdlrvellgetsiaecltyldngvvfvgsrlgdsqlvklnvdsneqgsyvvametftnlgpivdmcvvdlerqgqgqlvtcsgafkegslriirngigihehasidlpgikglwplrsdpnretddtlvlsfvgqtrvlmlveetelmgfvddqqtffcgnvahqqliqitsasvrlvsqepkalvsewkepqaknisvascnssqvvvavgralyylqihpqelrqishtemehevaclditplgdsnglsplcaiglwtdisarilklpsfellhkemlggeiiprsilmttfesshyllcalgdgalfyfglnietgllsdrkkvtlgtqptvlrtfrslsttnvfacsdrptviyssnhklvfsnvnlkevnymcplnsdgypdslalannstltigtideiqklhirtvplyesprkicyqevsqcfgvlssrievqdtsggttalrpsastqalsssvsssklfeevevhnlliidqhtfevlhahqflqneyalslvscklgkdpntyfivgtamvypeeaepkqgrivvfqysdgklqtvaekevkgavysmvefngkllasinstvrlyewttekelrtecnhynnimalylktkgdfilvgdlmrsvlllaykpmegnfeeiardfnpnwmsaveildddnflgaenafnlfvcqkdeerqhlqevglfhlgefvnvfchgslvmqtptqgsvlfgtvngmiglvtslseswynllldmqnrlnkviksvgkiehsfwrsfhterktepatgfidgdliesfldisrpkmqevvanddlikvveeltrih/gqtsilhyiyksslgqsihaqlrqclqepfirslksyklhrtaspfdrrvtslewhpthpttvavgskggdiilwdydvqnktsfiqgmgpgdaitgmkfnqfntnqlfvssirgattlrdfsgsviqvfaktdswdywyccvdvsvsrqmlatgdstgrllllgldgheifkeklhkakvthaefnprcdwlmatssvdatvklwdlrnikdknsyiaemphekpvnaayfnptdstkllttdqrneirvyssydwskpdqiiihphrqFQHltpikatwhpmydlivagrypddqlllndkrtidiydansgglvhqlrdpnaagiislnkfsptgdvlasgmgfniliwnre >4a0b_D:WD40_repeat-like; title=STRUCTURE OF HSDDB1-DRDDB2 BOUND TO A 16 BP CPD-DUPLEX (PYRIMIDINE AT D-1 POSITION) AT 3.8 A RESOLUTION (CPD 4) organism=? DNA sequence DG(I3):DC(J14) DT(I4):DA(J13) DG(I5):DC(J12) DA(I6):DT(J11) DA(I7):DT(J10) DT(I8):DA(J9) TTD(I9):DC(J8) DA(I11):DC(J7) DG(I12):DT(J6) DC(I13):DC(J5) DA(I14):DG(J4) DG(I15):DT(J3) chainD ( 68) LYS168 0 0 0 0 0 0 3 0 0 0 0 0 (113) ILE213 0 0 0 0 0 0 1 0 0 0 0 0 (114) ARG214 0 0 0 0 0 0 6 0 0 0 0 0 (136) TRP236 0 0 0 0 0 0 1 0 0 0 0 0 (137) ASP237 0 0 0 0 0 0 6 0 0 0 0 0 (139) TRP239 0 0 0 0 0 0 6 0 0 0 0 0 (271) PHE371 0 0 0 0 0 32 4 8 0 0 0 0 (272) GLN372 0 0 0 0 0 0 3 32 0 0 0 0 (273) HIS373 0 0 0 0 0 82 0 0 0 0 0 0 prot.sequence gqtsilhyiyksslgqsihaqlrqclqepfirslksyklhrtaspfdrrvtslewhpthpttvavgskggdiilwdydvqnktsfiqgmgpgdaitgmkfnqfntnqlfvssirgattlrdfsgsviqvfaktdswdywyccvdvsvsrqmlatgdstgrllllgldgheifkeklhkakvthaefnprcdwlmatssvdatvklwdlrnikdknsyiaemphekpvnaayfnptdstkllttdqrneirvyssydwskpdqiiihphrqFQHltpikatwhpmydlivagrypddqlllndkrtidiydansgglvhqlrdpnaagiislnkfsptgdvlasgmgfniliwnre >4a0k_D:WD40_repeat-like; title=STRUCTURE OF DDB1-DDB2-CUL4A-RBX1 BOUND TO A 12 BP ABASIC SITE CONTAINING DNA-DUPLEX organism=DANIO RERIO DNA sequence DG(E1):DC(F12) DC(E2):DG(F11) DT(E3):DA(F10) DA(E4):DT(F9) DC(E5):DG(F8) DT(E6):DA(F7) 3DR(E7):DA(F6) DA(E8):DT(F5) DC(E9):DG(F4) DG(E10):DC(F3) DC(E11):DG(F2) DA(E12):DT(F1) chainD (136) TRP236 0 0 0 0 0 0 0 55 0 0 0 0 (271) PHE371 0 0 0 0 0 28 2 7 0 0 0 0 (272) GLN372 0 0 0 0 0 0 0 9 31 0 0 0 (273) HIS373 0 0 0 0 0 92 0 0 0 0 0 0 prot.sequence gqtsilhyiyksslgqsihaqlrqclqepfirslksyklhrtaspfdrrvtslewhpthpttvavgskggdiilwdydvqnktsfiqgmgpgdaitgmkfnqfntnqlfvssirgattlrdfsgsviqvfaktdsWdywyccvdvsvsrqmlatgdstgrllllgldgheifkeklhkakvthaefnprcdwlmatssvdatvklwdlrnikdknsyiaemphekpvnaayfnptdstkllttdqrneirvyssydwskpdqiiihphrqFQHltpikatwhpmydlivagrypddqlllndkrtidiydansgglvhqlrdpnaagiislnkfsptgdvlasgmgfniliwnre >4a0l_B:WD40_repeat-like; title=STRUCTURE OF DDB1-DDB2-CUL4B-RBX1 BOUND TO A 12 BP ABASIC SITE CONTAINING DNA-DUPLEX organism=DANIO RERIO DNA sequence DG(R3):DC(S14) DC(R4):DG(S13) DT(R5):DA(S12) DA(R6):DT(S11) DC(R7):DG(S10) DT(R8):DA(S9) 3DR(R9):DA(S8) DA(R10):DT(S7) DC(R11):DG(S6) DG(R12):DC(S5) DC(R13):DG(S4) DA(R14):DT(S3) chainB ( 48) ARG148 0 0 0 0 0 2 0 0 0 0 0 0 (136) TRP236 0 0 0 0 0 0 0 55 0 0 0 0 (271) PHE371 0 0 0 0 0 28 2 6 0 0 0 0 (272) GLN372 0 0 0 0 0 0 0 9 32 0 0 0 (273) HIS373 0 0 0 0 0 92 0 0 0 0 0 0 prot.sequence gqtsilhyiyksslgqsihaqlrqclqepfirslksyklhrtaspfdRrvtslewhpthpttvavgskggdiilwdydvqnktsfiqgmgpgdaitgmkfnqfntnqlfvssirgattlrdfsgsviqvfaktdsWdywyccvdvsvsrqmlatgdstgrllllgldgheifkeklhkakvthaefnprcdwlmatssvdatvklwdlrnikdknsyiaemphekpvnaayfnptdstkllttdqrneirvyssydwskpdqiiihphrqFQHltpikatwhpmydlivagrypddqlllndkrtidiydansgglvhqlrdpnaagiislnkfsptgdvlasgmgfniliwnre >4a12_ABCD:Thioesterase/thiol_ester_dehydrase-isomerase;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE GLOBAL TRANSCRIPTION REGULATOR FAPR FROM STAPHYLOCOCCUS AUREUS IN COMPLEX WITH DNA OPERATOR organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(F1):DC(G40) DC(F2):DG(G39) DC(F3):DG(G38) DA(F4):DT(G37) DA(F5):DT(G36) DT(F6):DA(G35) DT(F7):DA(G34) DA(F8):DT(G33) DT(F9):DA(G32) DA(F10):DT(G31) DT(F11):DA(G30) DA(F12):DT(G29) DC(F13):DG(G28) DT(F14):DA(G27) DA(F15):DT(G26) DC(F16):DG(G25) DT(F17):DA(G24) DA(F18):DT(G23) DT(F19):DA(G22) DT(F20):DA(G21) DA(F21):DT(G20) DG(F22):DC(G19) DT(F23):DA(G18) DA(F24):DT(G17) DC(F25):DG(G16) DC(F26):DG(G15) DT(F27):DA(G14) DA(F28):DT(G13) DG(F29):DC(G12) DT(F30):DA(G11) DC(F31):DG(G10) DT(F32):DA(G9) DT(F33):DA(G8) DA(F34):DT(G7) DA(F35):DT(G6) DT(F36):DA(G5) DT(F37):DA(G4) DC(F38):DG(G3) DC(F39):DG(G2) DG(F40):DC(G1) chainA ( 35) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 3 0 0 0 0 0 0 ( 36) THR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 38) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 ( 39) LEU45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 50) ARG56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 36) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) LEU45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 36) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) LEU45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG56 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 33) SER39 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN41 0 0 0 0 0 0 3 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR42 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG44 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LEU45 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG56 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klkkdkrreairqqidsnpfitdhelsdlfqvsiQTiRLdrtylnipelRkriklvaeknydqissieeqefigdliqvnpnvkaqsilditsdsvfhktgiarghvlfaqanslcvalikqptvlthessiqfiekvklndtvraearvvnqtakhyyvevksyvkhtlvfkgnfkmfydkr/etlklkkdkrreairqqidsnpfitdhelsdlfqvSiQTiRLdrtylnipelRkriklvaeknydqissieeqefigdliqvnpnvkaqsilditsdsvfhktgiarghvlfaqanslcvalikqptvlthessiqfiekvklndtvraearvvnqtakhyyvevksyvkhtlvfkgnfkmfydkr/etlklkkdkrreairqqidsnpfitdhelsdlfqvSiQTiRLdrtylnipelRkriklvaeknydqissieeqefigdliqvnpnvkaqsilditsdsvfhktgiarghvlfaqanslcvalikqptvlthessiqfiekvklndtvraearvvnqtakhyyvevksyvkhtlvfkgnfkmfydkr/klkkdkrreairqqidsnpfitdhelsdlfqvSiQTiRLdrtylnipelRkriklvaeknydqissieeqefigdliqvnpnvkaqsilditsdsvfhktgiarghvlfaqanslcvalikqptvlthessiqfiekvklndtvraearvvnqtakhyyvevksyvkhtlvfkgnfkmfydkr >4a12_B:Thioesterase/thiol_ester_dehydrase-isomerase;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE GLOBAL TRANSCRIPTION REGULATOR FAPR FROM STAPHYLOCOCCUS AUREUS IN COMPLEX WITH DNA OPERATOR organism=STAPHYLOCOCCUS AUREUS DNA sequence DC(G1):DG(F40) DG(G2):DC(F39) DG(G3):DC(F38) DA(G4):DT(F37) DA(G5):DT(F36) DT(G6):DA(F35) DT(G7):DA(F34) DA(G8):DT(F33) DA(G9):DT(F32) DG(G10):DC(F31) DA(G11):DT(F30) DC(G12):DG(F29) DT(G13):DA(F28) DA(G14):DT(F27) DG(G15):DC(F26) DG(G16):DC(F25) DT(G17):DA(F24) DA(G18):DT(F23) DC(G19):DG(F22) DT(G20):DA(F21) DA(G21):DT(F20) DA(G22):DT(F19) DT(G23):DA(F18) DA(G24):DT(F17) DG(G25):DC(F16) DT(G26):DA(F15) DA(G27):DT(F14) DG(G28):DC(F13) DT(G29):DA(F12) DA(G30):DT(F11) DT(G31):DA(F10) DA(G32):DT(F9) DT(G33):DA(F8) DA(G34):DT(F7) DA(G35):DT(F6) DT(G36):DA(F5) DT(G37):DA(F4) DG(G38):DC(F3) DG(G39):DC(F2) DC(G40):DG(F1) chainB ( 36) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) LEU45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG56 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence etlklkkdkrreairqqidsnpfitdhelsdlfqvSiQTiRLdrtylnipelRkriklvaeknydqissieeqefigdliqvnpnvkaqsilditsdsvfhktgiarghvlfaqanslcvalikqptvlthessiqfiekvklndtvraearvvnqtakhyyvevksyvkhtlvfkgnfkmfydkr >4a3b_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 4NT DNA-RNA HYBRID organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T13) DC(T14) DT(T15) DT(T16) DT(T17) DT(T18) DT(T19) DC(T20) DC(T21) DG(T23) DG(T24) chainB (1011) GLU1120 0 0 0 0 0 0 0 0 0 0 3 (1015) ARG1124 0 0 0 0 0 0 0 0 0 0 8 prot.sequence desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvEgrsRdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >4a3c_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 5NT DNA-RNA HYBRID organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N2):DT(T16) DA(N3):DT(T15) DG(N4):DC(T14) DT(N5):DA(T13) DA(N6):DT(T12) DC(N7):DG(T11) DT(N8):DA(T10) DT(N9):DA(T9) DG(N10):DC(T8) DA(N11):DT(T7) chainA (1353) ARG1386 1 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >4a3d_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 6NT DNA-RNA HYBRID organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N2):DT(T16) DA(N3):DT(T15) DG(N4):DC(T14) DT(N5):DA(T13) DA(N6):DT(T12) DC(N7):DG(T11) DT(N8):DA(T10) DT(N9):DA(T9) DG(N10):DC(T8) DA(N11):DT(T7) chainA (1353) ARG1386 2 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >4a3e_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 5NT DNA-RNA HYBRID AND SOAKED WITH AMPCPP organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N3):DT(T15) DG(N4):DC(T14) DT(N5):DA(T13) DA(N6):DT(T12) DC(N7):DG(T11) DT(N8):DA(T10) DT(N9):DA(T9) DG(N10):DC(T8) chainA (1354) ARG1386 3 0 1 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >4a3f_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 6NT DNA-RNA HYBRID AND SOAKED WITH AMPCPP organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T6):DG(N12) DT(T7):DA(N11) DC(T8):DG(N10) DA(T9):DT(N9) DA(T10):DT(N8) DG(T11):DC(N7) DT(T12):DA(N6) DA(T13):DT(N5) DC(T14):DG(N4) DT(T15):DA(N3) DT(T16):DA(N2) chainA (1356) ARG1386 0 0 0 0 0 0 0 0 1 4 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >4a3f_AB: title=RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 6NT DNA-RNA HYBRID AND SOAKED WITH AMPCPP organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N2):DT(T16) DA(N3):DT(T15) DG(N4):DC(T14) DT(N5):DA(T13) DA(N6):DT(T12) DC(N7):DG(T11) DT(N8):DA(T10) DT(N9):DA(T9) DG(N10):DC(T8) DA(N11):DT(T7) DG(N12):DC(T6) chainA (1356) ARG1386 0 4 1 0 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >4a3g_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 2NT DNA-RNA HYBRID organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(N2):DC(T16) DC(N3):DG(T15) DA(N4):DT(T14) DC(N5):DG(T13) DA(N6):DT(T12) DA(N7):DT(T11) DC(N8):DG(T10) DT(N9):DA(T9) DG(N10):DC(T8) chainA (1353) ARG1386 1 7 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >4a3g_AB: title=RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 2NT DNA-RNA HYBRID organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(N2):DC(T16) DC(N3):DG(T15) DA(N4):DT(T14) DC(N5):DG(T13) DA(N6):DT(T12) DA(N7):DT(T11) DC(N8):DG(T10) DT(N9):DA(T9) DG(N10):DC(T8) chainA (1353) ARG1386 1 7 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >4a3i_AB: title=RNA POLYMERASE II BINARY COMPLEX WITH DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T6):DG(N12) DG(T7):DC(N11) DC(T8):DG(N10) DA(T9):DT(N9) DG(T10):DC(N8) DT(T11):DA(N7) DT(T12):DA(N6) DG(T13):DC(N5) DT(T14):DA(N4) DG(T15):DC(N3) DC(T16):DG(N2) chainA (1353) ARG1386 0 0 0 0 0 0 0 0 0 6 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >4a3k_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 7NT DNA-RNA HYBRID organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(T7):DA(N11) DC(T8):DG(N10) DA(T9):DT(N9) DA(T10):DT(N8) DG(T11):DC(N7) DT(T12):DA(N6) DA(T13):DT(N5) DC(T14):DG(N4) DT(T15):DA(N3) DT(T16):DA(N2) chainA (1353) ARG1386 0 0 0 0 0 0 0 0 0 1 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >4a3l_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 7NT DNA-RNA HYBRID AND SOAKED WITH AMPCPP organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T8):DG(N10) DA(T9):DT(N9) DA(T10):DT(N8) DG(T11):DC(N7) DT(T12):DA(N6) DA(T13):DT(N5) DC(T14):DG(N4) DT(T15):DA(N3) DT(T16):DA(N2) chainA (1356) ARG1386 0 0 0 0 0 0 1 4 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >4a3l_AB: title=RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 7NT DNA-RNA HYBRID AND SOAKED WITH AMPCPP organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N2):DT(T16) DA(N3):DT(T15) DG(N4):DC(T14) DT(N5):DA(T13) DA(N6):DT(T12) DC(N7):DG(T11) DT(N8):DA(T10) DT(N9):DA(T9) DG(N10):DC(T8) chainA (1356) ARG1386 0 4 1 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >4a3m_AB: title=RNA POLYMERASE II INITIAL TRANSCRIBING COMPLEX WITH A 4NT DNA-RNA HYBRID AND SOAKED WITH AMPCPP organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N2):DT(T16) DA(N3):DT(T15) DG(N4):DC(T14) DT(N5):DA(T13) DA(N6):DT(T12) DC(N7):DG(T11) DT(N8):DA(T10) DT(N9):DA(T9) DG(N10):DC(T8) chainA (141) LYS143 0 0 0 0 0 0 0 1 0 (834) TYR836 1 0 0 0 0 0 0 0 0 (1356) ARG1386 0 4 1 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingSekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrStengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >4a8s_C:DNA/RNA_polymerases; title=NON-CATALYTIC IONS DIRECT THE RNA-DEPENDENT RNA POLYMERASE OF BACTERIAL DSRNA VIRUS PHI6 FROM DE NOVO INITIATION TO ELONGATION organism=PSEUDOMONAS PHAGE PHI6 DNA sequence DC(H5) DT(H4) DT(H1) DT(H2) DT(H3):DT(H4) chainC ( 30) ARG30 0 0 0 2 0 (146) ARG146 4 0 0 0 0 (202) VAL202 0 0 0 1 1 (204) ARG204 0 0 0 0 7 (272) ALA272 0 0 0 0 5 (393) SER393 0 0 0 0 5 (398) THR398 0 5 0 0 5 (623) LEU628 13 0 0 0 0 (624) GLN629 11 20 0 0 20 (628) MET646 1 0 0 0 0 prot.sequence prrapafplsdikaqmlfannikaqqaskRsfkegaietyegllsvdprflsfknelsryltdhfpanvdeygrvygngvrtnffgmrhmngfpmipatwplasnlkkradadladgpvserdnllfraavrlmfsdlepvplkiRkgsstcipyfsndmgtkieiaeralekaeeagnlmlqgkfddayqlhqmggayyvVyRaqstdaitldpktgkfvskdrmvadfeyavtggeqgslfaaskdasrlkeqygidvpdgffcerrrtAmggpfalnapimavaqpvrnkiyskyaytfhhttrlnkeekvkewslcvatdvsdhdtfwpgwlrdlicdellnmgyapwwvklfetslklpvyvgapapeqghtllgdpsnpdlevglsSgqgaTdlmgtllmsitylvmqldhtaphlnsrikdmpsacrfldsywqgheeirqisksddamlgwtkgralvgghrlfemlkegkvnpspymkisyehggaflgdillydsrrepgsaifvgninsmlnnqfspeygvqsgvrdrskrkrpfpglawasmkdtygacpiysdvleaiercwwnafgesyrayredmlkrdtlelsryvasmaaeltpIDleVladpnkLQyvlMhgvsvekterflrsvmpr >4a93_AB: title=RNA POLYMERASE II ELONGATION COMPLEX CONTAINING A CPD LESION organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T5):DT(N14) DG(T6):DC(N13) DC(T7):DG(N12) DT(T8):DA(N11) DC(T9):DG(N10) DA(T10):DT(N9) DA(T11):DT(N8) DG(T12):DC(N7) DT(T13):DA(N6) DA(T14):DT(N5) DC(T15):DG(N4) DT(T16):DA(N3) chainA (830) ALA832 0 0 0 0 0 0 0 0 0 0 0 1 (831) GLU833 0 0 0 0 0 0 0 0 0 0 0 7 (834) TYR836 0 0 0 0 0 0 0 0 0 0 0 2 (1353) ARG1386 0 0 0 0 0 0 0 0 0 0 2 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktAEtgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpissdastpLRstEngivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >4aa6_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=THE OESTROGEN RECEPTOR RECOGNIZES AN IMPERFECTLY PALINDROMIC RESPONSE ELEMENT THROUGH AN ALTERNATIVE SIDE-CHAIN CONFORMATION organism=HOMO SAPIENS DNA sequence DC(D2):DG(C18) DA(D3):DT(C17) DG(D4):DC(C16) DG(D5):DC(C15) DT(D6):DA(C14) DC(D7):DG(C13) DA(D8):DT(C12) DC(D9):DG(C11) DT(D10):DA(C10) DG(D11):DC(C9) DT(D12):DA(C8) DG(D13):DC(C7) DA(D14):DT(C6) DC(D15):DG(C5) DT(D16):DA(C4) DT(D17):DA(C3) DA(D18):DT(C2) chainA ( 22) GLU203 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 ( 25) LYS206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 ( 26) ALA207 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 29) LYS210 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 ( 30) ARG211 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 chainB ( 22) GLU203 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS206 0 2 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA207 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS210 0 0 2 9 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG211 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 prot.sequence trycavcndyasgyhygvwscEgcKAffKRsihndymcpatnqctidknrrkscqacrlrkcyevgmmk/trycavcndyasgyhygvwscEgcKAffKRsiqghdymcpatnqctidknrrkscqacrlrkcyevgmmk >4aa6_E:Glucocorticoid_receptor-like_DNA-binding_domain; title=THE OESTROGEN RECEPTOR RECOGNIZES AN IMPERFECTLY PALINDROMIC RESPONSE ELEMENT THROUGH AN ALTERNATIVE SIDE-CHAIN CONFORMATION organism=HOMO SAPIENS DNA sequence DT(G2):DA(H18) DA(G3):DT(H17) DA(G4):DT(H16) DG(G5):DC(H15) DT(G6):DA(H14) DC(G7):DG(H13) DA(G8):DT(H12) DC(G9):DG(H11) DA(G10):DT(H10) DG(G11):DC(H9) DT(G12):DA(H8) DG(G13):DC(H7) DA(G14):DT(H6) DC(G15):DG(H5) DC(G16):DG(H4) DT(G17):DA(H3) DG(G18):DC(H2) chainE ( 21) GLU203 0 0 1 9 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS206 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ALA207 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS210 0 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG211 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 prot.sequence rycavcndyasgyhygvwscEgcKAffKRsiqgdymcpatnqctidknrrkscqacrlrkcyevgmmk >4aa6_EF:Glucocorticoid_receptor-like_DNA-binding_domain; title=THE OESTROGEN RECEPTOR RECOGNIZES AN IMPERFECTLY PALINDROMIC RESPONSE ELEMENT THROUGH AN ALTERNATIVE SIDE-CHAIN CONFORMATION organism=HOMO SAPIENS DNA sequence DC(H2):DG(G18) DA(H3):DT(G17) DG(H4):DC(G16) DG(H5):DC(G15) DT(H6):DA(G14) DC(H7):DG(G13) DA(H8):DT(G12) DC(H9):DG(G11) DT(H10):DA(G10) DG(H11):DC(G9) DT(H12):DA(G8) DG(H13):DC(G7) DA(H14):DT(G6) DC(H15):DG(G5) DT(H16):DA(G4) DT(H17):DA(G3) DA(H18):DT(G2) chainE ( 21) GLU203 0 0 0 0 0 0 0 0 0 0 0 0 6 9 1 0 0 ( 24) LYS206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 ( 25) ALA207 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 28) LYS210 0 0 0 0 0 0 0 0 0 0 0 0 3 7 1 0 0 ( 29) ARG211 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 chainF ( 22) GLU203 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS206 0 5 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA207 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS210 0 0 1 8 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG211 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 prot.sequence rycavcndyasgyhygvwscEgcKAffKRsiqgdymcpatnqctidknrrkscqacrlrkcyevgmmk/trycavcndyasgyhygvwscEgcKAffKRsiqghndymcpatnqctidkrkscqacrlrkcyevgmmk >4aab_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE MUTANT D75N I-CREI IN COMPLEX WITH ITS WILD- TYPE TARGET (THE FOUR CENTRAL BASES, 2NN REGION, ARE COMPOSED BY GTAC FROM 5' TO 3') organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(D501):DA(G624) DC(D502):DG(G623) DA(D503):DT(G622) DA(D504):DT(G621) DA(D505):DT(G620) DA(D506):DT(G619) DC(D507):DG(G618) DG(D508):DC(G617) DT(D509):DA(G616) DC(D510):DG(G615) DG(D511):DC(F614) DT(D512):DA(F613) DA(D513):DT(F612) DC(D514):DG(F611) DG(E515):DC(F610) DA(E516):DT(F609) DC(E517):DG(F608) DG(E518):DC(F607) DT(E519):DA(F606) DT(E520):DA(F605) DT(E521):DA(F604) DT(E522):DA(F603) DG(E523):DC(F602) DA(E524):DT(F601) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 2 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 16 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 5 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 16 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld >4aab_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE MUTANT D75N I-CREI IN COMPLEX WITH ITS WILD- TYPE TARGET (THE FOUR CENTRAL BASES, 2NN REGION, ARE COMPOSED BY GTAC FROM 5' TO 3') organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(F601):DA(E524) DC(F602):DG(E523) DA(F603):DT(E522) DA(F604):DT(E521) DA(F605):DT(E520) DA(F606):DT(E519) DC(F607):DG(E518) DG(F608):DC(E517) DT(F609):DA(E516) DC(F610):DG(E515) DG(F611):DC(D514) DT(F612):DA(D513) DA(F613):DT(D512) DC(F614):DG(D511) DG(G615):DC(D510) DA(G616):DT(D509) DC(G617):DG(D508) DG(G618):DC(D507) DT(G619):DA(D506) DT(G620):DA(D505) DT(G621):DA(D504) DT(G622):DA(D503) DG(G623):DC(D502) DA(G624):DT(D501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 2 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 16 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 5 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 16 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 2 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 12 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 4 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 14 1 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >4aad_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE MUTANT D75N I-CREI IN COMPLEX WITH ITS WILD- TYPE TARGET IN ABSENCE OF METAL IONS AT THE ACTIVE SITE (THE FOUR CENTRAL BASES, 2NN REGION, ARE COMPOSED BY GTAC FROM 5' TO 3') organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(E501):DA(F624) DC(E502):DG(F623) DA(E503):DT(F622) DA(E504):DT(F621) DA(E505):DT(F620) DA(E506):DT(F619) DC(E507):DG(F618) DG(E508):DC(F617) DT(E509):DA(F616) DC(E510):DG(F615) DG(E511):DC(F614) DT(E512):DA(F613) DA(E513):DT(F612) DC(E514):DG(F611) DG(E515):DC(F610) DA(E516):DT(F609) DC(E517):DG(F608) DG(E518):DC(F607) DT(E519):DA(F606) DT(E520):DA(F605) DT(E521):DA(F604) DT(E522):DA(F603) DG(E523):DC(F602) DA(E524):DT(F601) chainA ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 16 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 6 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 8 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgsiIaQiKpNqSYkfkhQlsltfQvtqktqrrwfldklvdeigvgyvRdRgsvsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravl >4aad_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE MUTANT D75N I-CREI IN COMPLEX WITH ITS WILD- TYPE TARGET IN ABSENCE OF METAL IONS AT THE ACTIVE SITE (THE FOUR CENTRAL BASES, 2NN REGION, ARE COMPOSED BY GTAC FROM 5' TO 3') organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(E501):DA(F624) DC(E502):DG(F623) DA(E503):DT(F622) DA(E504):DT(F621) DA(E505):DT(F620) DA(E506):DT(F619) DC(E507):DG(F618) DG(E508):DC(F617) DT(E509):DA(F616) DC(E510):DG(F615) DG(E511):DC(F614) DT(E512):DA(F613) DA(E513):DT(F612) DC(E514):DG(F611) DG(E515):DC(F610) DA(E516):DT(F609) DC(E517):DG(F608) DG(E518):DC(F607) DT(E519):DA(F606) DT(E520):DA(F605) DT(E521):DA(F604) DT(E522):DA(F603) DG(E523):DC(F602) DA(E524):DT(F601) chainA ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 16 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 6 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 8 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 chainB ( 23) ILE24 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 3 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 16 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 2 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 4 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgsiIaQiKpNqSYkfkhQlsltfQvtqktqrrwfldklvdeigvgyvRdRgsvsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravl/ntkynkefllylagfvdgdgsiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsvsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >4aae_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE MUTANT D75N I-CREI IN COMPLEX WITH AN ALTERED TARGET (THE FOUR CENTRAL BASES, 2NN REGION, ARE COMPOSED BY AGCG FROM 5' TO 3') organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(G601):DA(E524) DC(G602):DG(E523) DA(G603):DT(E522) DA(G604):DT(E521) DA(G605):DT(E520) DA(G606):DT(E519) DC(G607):DG(E518) DG(G608):DC(E517) DT(G609):DA(E516) DC(G610):DG(E515) DC(G611):DG(E514) DG(G612):DC(E513) DC(G613):DG(E512) DT(G614):DA(E511) DG(G615):DC(E510) DA(G616):DT(E509) DC(G617):DG(E508) DG(G618):DC(E507) DT(G619):DA(E506) DT(G620):DA(E505) DT(G621):DA(E504) DT(G622):DA(E503) DG(G623):DC(E502) DA(G624):DT(E501) chainA ( 23) ILE24 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 1 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 2 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 17 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 3 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 14 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 12 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 2 5 3 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgsiIaQiKpNqSYkfkhQlsltfQvtqktqrrwfldklvdeigvgyvRdRgsvsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >4aae_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE MUTANT D75N I-CREI IN COMPLEX WITH AN ALTERED TARGET (THE FOUR CENTRAL BASES, 2NN REGION, ARE COMPOSED BY AGCG FROM 5' TO 3') organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(E501):DA(G624) DC(E502):DG(G623) DA(E503):DT(G622) DA(E504):DT(G621) DA(E505):DT(G620) DA(E506):DT(G619) DC(E507):DG(G618) DG(E508):DC(G617) DT(E509):DA(G616) DC(E510):DG(G615) DA(E511):DT(G614) DG(E512):DC(G613) DC(E513):DG(G612) DG(E514):DC(G611) DG(E515):DC(G610) DA(E516):DT(G609) DC(E517):DG(G608) DG(E518):DC(G607) DT(E519):DA(G606) DT(E520):DA(G605) DT(E521):DA(G604) DT(E522):DA(G603) DG(E523):DC(G602) DA(E524):DT(G601) chainA ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 1 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 2 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 17 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 3 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 14 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 12 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 3 5 2 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 chainB ( 23) ILE24 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 2 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 18 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 4 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 11 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgsiIaQiKpNqSYkfkhQlsltfQvtqktqrrwfldklvdeigvgyvRdRgsvsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgsiIaQiKpNqSYkfkhQlSltfQvtqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravlds >4aaf_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE MUTANT D75N I-CREI IN COMPLEX WITH AN ALTERED TARGET (THE FOUR CENTRAL BASES, 2NN REGION, ARE COMPOSED BY TGCA FROM 5' TO 3') organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(G601):DA(E524) DC(G602):DG(E523) DA(G603):DT(E522) DA(G604):DT(E521) DA(G605):DT(E520) DA(G606):DT(E519) DC(G607):DG(E518) DG(G608):DC(E517) DT(G609):DA(E516) DC(G610):DG(E515) DT(G611):DA(E514) DG(G612):DC(E513) DC(G613):DG(E512) DA(G614):DT(E511) DG(G615):DC(E510) DA(G616):DT(E509) DC(G617):DG(E508) DG(G618):DC(E507) DT(G619):DA(E506) DT(G620):DA(E505) DT(G621):DA(E504) DT(G622):DA(E503) DG(G623):DC(E502) DA(G624):DT(E501) chainA ( 23) ILE24 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 1 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 12 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 6 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 16 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 13 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 2 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 16 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 4 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 8 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgsiIaQiKpNqSYkfkhQlsltfQvtqktqrrwfldklvdeigvgyvRdRgsvsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravl/ntkynkefllylagfvdgdgsiIaQiKpNqSYkfkhQlsltfQvtqktqrrwfldklvdeigvgyvRdRgsvsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld >4aaf_B:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE MUTANT D75N I-CREI IN COMPLEX WITH AN ALTERED TARGET (THE FOUR CENTRAL BASES, 2NN REGION, ARE COMPOSED BY TGCA FROM 5' TO 3') organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(G601):DA(E524) DC(G602):DG(E523) DA(G603):DT(E522) DA(G604):DT(E521) DA(G605):DT(E520) DA(G606):DT(E519) DC(G607):DG(E518) DG(G608):DC(E517) DT(G609):DA(E516) DC(G610):DG(E515) DT(G611):DA(E514) DG(G612):DC(E513) DC(G613):DG(E512) DA(G614):DT(E511) DG(G615):DC(E510) DA(G616):DT(E509) DC(G617):DG(E508) DG(G618):DC(E507) DT(G619):DA(E506) DT(G620):DA(E505) DT(G621):DA(E504) DT(G622):DA(E503) DG(G623):DC(E502) DA(G624):DT(E501) chainB ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 2 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 16 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 4 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 8 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgsiIaQiKpNqSYkfkhQlsltfQvtqktqrrwfldklvdeigvgyvRdRgsvsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld >4aag_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE MUTANT D75N I-CREI IN COMPLEX WITH ITS WILD- TYPE TARGET IN PRESENCE OF CA AT THE ACTIVE SITE (THE FOUR CENTRAL BASES, 2NN REGION, ARE COMPOSED BY GTAC FROM 5' TO 3') organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(E501):DA(G624) DC(E502):DG(G623) DA(E503):DT(G622) DA(E504):DT(G621) DA(E505):DT(G620) DA(E506):DT(G619) DC(E507):DG(G618) DG(E508):DC(G617) DT(E509):DA(G616) DC(E510):DG(G615) DG(E511):DC(G614) DT(E512):DA(G613) DA(E513):DT(G612) DC(E514):DG(G611) DG(E515):DC(G610) DA(E516):DT(G609) DC(E517):DG(G608) DG(E518):DC(G607) DT(E519):DA(G606) DT(E520):DA(G605) DT(E521):DA(G604) DT(E522):DA(G603) DG(E523):DC(G602) DA(E524):DT(G601) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 3 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 15 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 18 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 1 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 3 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 16 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 12 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgSVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >4aag_B:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE MUTANT D75N I-CREI IN COMPLEX WITH ITS WILD- TYPE TARGET IN PRESENCE OF CA AT THE ACTIVE SITE (THE FOUR CENTRAL BASES, 2NN REGION, ARE COMPOSED BY GTAC FROM 5' TO 3') organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(E501):DA(G624) DC(E502):DG(G623) DA(E503):DT(G622) DA(E504):DT(G621) DA(E505):DT(G620) DA(E506):DT(G619) DC(E507):DG(G618) DG(E508):DC(G617) DT(E509):DA(G616) DC(E510):DG(G615) DG(E511):DC(G614) DT(E512):DA(G613) DA(E513):DT(G612) DC(E514):DG(G611) DG(E515):DC(G610) DA(E516):DT(G609) DC(E517):DG(G608) DG(E518):DC(G607) DT(E519):DA(G606) DT(E520):DA(G605) DT(E521):DA(G604) DT(E522):DA(G603) DG(E523):DC(G602) DA(E524):DT(G601) chainB ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 1 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 3 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 16 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 12 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >4abt_B:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF TYPE IIF RESTRICTION ENDONUCLEASE NGOMIV WITH COGNATE UNCLEAVED DNA organism=NEISSERIA GONORRHOEAE DNA sequence DT(G1) DG(G2) DC(G3) DG(G4) DC(G5) DC(G6) DG(G7) DG(G8) DC(G9) DG(G10) DC(G11) chainB ( 34) ASP34 0 0 0 0 0 0 0 0 9 0 0 ( 36) SER36 0 0 0 0 0 0 0 0 6 0 0 ( 63) GLN63 0 0 0 1 3 0 0 0 0 0 0 ( 99) SER99 0 0 1 1 0 0 0 0 0 0 0 (100) ARG100 0 1 0 0 0 0 0 0 0 0 0 (191) ARG191 0 0 0 0 0 0 12 14 5 0 0 (194) ARG194 0 0 0 0 0 18 14 0 0 0 0 (227) ARG227 0 0 0 0 0 0 0 0 2 0 0 prot.sequence mqplftqerrifhkklldgnilatnnrgvvsnaDgSntrsfniakgiadllhsetvserlpgQtsgnafeaicsefvqsafeklqhirpgdwnvkqvgSRnrleiaryqqyahltalakaaeenpelaaalgsdytitpdiivtrnliadaeinrneflvdeniatyaslragngnmpllhasisckwtiRsdRaqnarseglnlvrnrkgrlphivvvtaeptpsRissialgtgeidcvyhfalyeleqilqslnyedaldlfyimvngkrlkdisdlpldlav >4aij_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ROVA FROM YERSINIA IN COMPLEX WITH A ROVA PROMOTER FRAGMENT organism=YERSINIA PSEUDOTUBERCULOSIS DNA sequence DA(D2):DT(C21) DT(D3):DA(C20) DT(D4):DA(C19) DA(D5):DT(C18) DA(D6):DT(C17) DT(D7):DA(C16) DT(D8):DA(C15) DC(D9):DG(C14) DA(D10):DT(C13) DA(D11):DT(C12) DA(D12):DT(C11) DT(D13):DA(C10) DA(D14):DT(C9) DA(D15):DT(C8) DT(D16):DA(C7) DA(D17):DT(C6) DT(D18):DA(C5) DA(D19):DT(C4) DA(D20):DT(C3) DT(D21):DA(C2) chainA ( 48) ILE50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 57) GLU59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 58) GLN60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 ( 59) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 1 0 0 0 ( 62) VAL64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 ( 84) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 chainB ( 59) GLN60 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PRO61 0 0 0 0 0 2 7 7 2 0 0 0 0 0 0 0 0 0 0 0 ( 61) SER62 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 63) VAL64 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG65 0 0 0 0 0 0 0 2 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence stlgsdlarlvrvwralidhrlkpleltqthwvtlyninrlppeqsqIqlakaigiEQPslVrtldqleekglitrhtsandrRakriklteqsspiieqvdgvisstrkeilggissdeiavlsglidklekniiqlq/estlgsdlarlvrvwralidhrlkpleltqthwvtlyninrlppeqsqiqlakaigieQPSlVRtldqleekglitrhtsandrrakriklteqsspiieqvdgvisstrkeilggissdeiavlsglidklekniiqlqtk >4aij_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ROVA FROM YERSINIA IN COMPLEX WITH A ROVA PROMOTER FRAGMENT organism=YERSINIA PSEUDOTUBERCULOSIS DNA sequence DA(C2):DT(D21) DT(C3):DA(D20) DT(C4):DA(D19) DA(C5):DT(D18) DT(C6):DA(D17) DA(C7):DT(D16) DT(C8):DA(D15) DT(C9):DA(D14) DA(C10):DT(D13) DT(C11):DA(D12) DT(C12):DA(D11) DT(C13):DA(D10) DG(C14):DC(D9) DA(C15):DT(D8) DA(C16):DT(D7) DT(C17):DA(D6) DT(C18):DA(D5) DA(C19):DT(D4) DA(C20):DT(D3) DT(C21):DA(D2) chainB ( 59) GLN60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 60) PRO61 0 0 0 0 0 0 0 0 0 0 0 2 7 7 2 0 0 0 0 0 ( 61) SER62 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 63) VAL64 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 64) ARG65 0 0 0 0 0 0 0 0 0 0 3 0 2 0 0 0 0 0 0 0 prot.sequence estlgsdlarlvrvwralidhrlkpleltqthwvtlyninrlppeqsqiqlakaigieQPSlVRtldqleekglitrhtsandrrakriklteqsspiieqvdgvisstrkeilggissdeiavlsglidklekniiqlqtk >4aik_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ROVA FROM YERSINIA IN COMPLEX WITH AN INVASIN PROMOTER FRAGMENT organism=YERSINIA PSEUDOTUBERCULOSIS DNA sequence DT(C2):DA(D21) DG(C3):DC(D20) DA(C4):DT(D19) DT(C5):DA(D18) DA(C6):DT(D17) DT(C7):DA(D16) DT(C8):DA(D15) DA(C9):DT(D14) DT(C10):DA(D13) DT(C11):DA(D12) DT(C12):DA(D11) DA(C13):DT(D10) DT(C14):DA(D9) DA(C15):DT(D8) DT(C16):DA(D7) DG(C17):DC(D6) DA(C18):DT(D5) DT(C19):DA(D4) DA(C20):DT(D3) DA(C21):DT(D2) chainA ( 58) GLN60 0 0 0 0 0 0 0 0 0 0 0 0 15 8 0 0 0 0 0 0 ( 59) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 2 0 0 0 ( 60) SER62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 62) VAL64 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 84) ARG86 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 prot.sequence stlgsdlarlvrvwralidhrlkpleltqthwvtlyninrlppeqsqiqlakaigieQPSlVrtldqleekglitrhtsandrRakriklteqsspiieqvdgvisstrkeilggissdeiavlsglidklekniiqlq >4ail_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF AN EVOLVED REPLICATING DNA POLYMERASE organism=PYROCOCCUS FURIOSUS DNA sequence DG(A4):DOC(B8) DG(A5):DC(B7) DT(A6):DA(B6) DA(A7):DT(B5) DA(A8):DT(B4) DG(A9):DC(B3) DC(A10):DG(B2) DA(A11):DT(B1) chainC (593) LYS593 0 5 5 0 0 0 0 0 (613) ARG613 0 0 0 5 2 0 0 0 (615) ASP615 0 0 0 0 1 0 0 0 prot.sequence mildvdyiteegkpvirlfkkengkfkiehdrtfrpyiyallrddskieevkkitgerhgkivrivdvekvekkflgkpitvwklylehpqdqptirekvrehpavvdifeydipfakrylidkglipmegeeelkilafaiatlyhegeefgkgpiimisyadeneakvitwknidlpyvevvsseremikrflriirekdpdiivtyngdsfdfpylakraeklgikltigrdgsepkmqrigdmtavevkgrihfdlyhvitrtinlptytleavyeaifgkpkekvyadeiakawesgenlervakysmedakatyelgkeflpmeiqlsrligqplwdvsrsstgnlvewfllrkayernevapnkpseeeyqrrlresytggfvkepekglwddivyldfialypsiiithnvspdtlnlegcknydiapqvghkfckdipgfipsllghlleerqkiktkmketqdpiekilldyrqkaikllansfYgyygyakarwyckecaesvtawgrkyielvwkeleekfgfkvlyidtdglhatipggeseeikkkalefvkyinsklpglleleyegfykrgffvtkKryavideegkvitrgleivRrDwseiaketqarvletilkhgdveeavrivkeviqklanyeippeklaiyeqitrplheykaigphvavakklaakgvkikpgmvigyivlrgdgpisnrailaeeydpydaeyyienqvlpavlrilegfgyrke >4aqu_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF I-CREI COMPLEXED WITH ITS TARGET METHYLATED AT POSITION PLUS 2 (IN THE B STRAND) IN THE PRESENCE OF CALCIUM organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(C401):DA(D524) DC(C402):DG(D523) DA(C403):DT(D522) DA(C404):DT(D521) DA(C405):DT(D520) DA(C406):DT(D519) DC(C407):DG(D518) DG(C408):DC(D517) DT(C409):DA(D516) DC(C410):DG(D515) DG(C411):5CM(D514) DT(C412):DA(D513) DG(C413):DC(D512) DA(C414):DT(D511) DG(C415):DC(D510) DA(C416):DT(D509) DC(C417):DG(D508) DA(C418):DT(D507) DG(C419):DC(D506) DT(C420):DA(D505) DT(C421):DA(D504) DT(C422):DA(D503) DG(C423):DC(D502) DG(C424):DC(D501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 1 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 3 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 18 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 7 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 15 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 25) GLN226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 ( 27) LYS228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 3 0 0 0 0 ( 29) ASN230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 31) SER232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 ( 32) TYR233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 17 0 ( 37) GLN238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 4 0 0 ( 43) GLN244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 ( 45) THR246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 65) TYR266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 67) ARG268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 12 0 0 0 0 0 0 ( 69) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 13 0 0 0 0 0 0 0 0 ( 72) VAL273 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (138) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (139) THR340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsdyilSeikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >4aqu_B:Homing_endonucleases; title=CRYSTAL STRUCTURE OF I-CREI COMPLEXED WITH ITS TARGET METHYLATED AT POSITION PLUS 2 (IN THE B STRAND) IN THE PRESENCE OF CALCIUM organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(C401):DA(D524) DC(C402):DG(D523) DA(C403):DT(D522) DA(C404):DT(D521) DA(C405):DT(D520) DA(C406):DT(D519) DC(C407):DG(D518) DG(C408):DC(D517) DT(C409):DA(D516) DC(C410):DG(D515) DG(C411):5CM(D514) DT(C412):DA(D513) DG(C413):DC(D512) DA(C414):DT(D511) DG(C415):DC(D510) DA(C416):DT(D509) DC(C417):DG(D508) DA(C418):DT(D507) DG(C419):DC(D506) DT(C420):DA(D505) DT(C421):DA(D504) DT(C422):DA(D503) DG(C423):DC(D502) DG(C424):DC(D501) chainB ( 21) SER222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 25) GLN226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 ( 27) LYS228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 3 0 0 0 0 ( 29) ASN230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 31) SER232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 ( 32) TYR233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 17 0 ( 37) GLN238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 4 0 0 ( 43) GLN244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 ( 45) THR246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 65) TYR266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 67) ARG268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 12 0 0 0 0 0 0 ( 69) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 13 0 0 0 0 0 0 0 0 ( 72) VAL273 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (138) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (139) THR340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >4aqx_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF I-CREI COMPLEXED WITH ITS TARGET METHYLATED AT POSITION PLUS 2 (IN THE B STRAND) IN THE PRESENCE OF MAGNESIUM organism=CHLAMYDOMONAS REINHARDTII DNA sequence DC(E601):DG(D524) DC(E602):DG(D523) DA(E603):DT(D522) DA(E604):DT(D521) DA(E605):DT(D520) DC(E606):DG(D519) DT(E607):DA(D518) DG(E608):DC(D517) DT(E609):DA(D516) DC(E610):DG(D515) DT(E611):DA(C514) DC(E612):DG(C513) DA(E613):DT(C512) 5CM(E614):DG(C511) DG(F615):DC(C510) DA(F616):DT(C509) DC(F617):DG(C508) DG(F618):DC(C507) DT(F619):DA(C506) DT(F620):DA(C505) DT(F621):DA(C504) DT(F622):DA(C503) DG(F623):DC(C502) DA(F624):DT(C501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 3 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 16 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 5 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 7 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 17 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >4aqx_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF I-CREI COMPLEXED WITH ITS TARGET METHYLATED AT POSITION PLUS 2 (IN THE B STRAND) IN THE PRESENCE OF MAGNESIUM organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(C501):DA(F624) DC(C502):DG(F623) DA(C503):DT(F622) DA(C504):DT(F621) DA(C505):DT(F620) DA(C506):DT(F619) DC(C507):DG(F618) DG(C508):DC(F617) DT(C509):DA(F616) DC(C510):DG(F615) DG(C511):5CM(E614) DT(C512):DA(E613) DG(C513):DC(E612) DA(C514):DT(E611) DG(D515):DC(E610) DA(D516):DT(E609) DC(D517):DG(E608) DA(D518):DT(E607) DG(D519):DC(E606) DT(D520):DA(E605) DT(D521):DA(E604) DT(D522):DA(E603) DG(D523):DC(E602) DG(D524):DC(E601) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 3 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 16 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 5 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 7 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 17 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 1 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 2 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 14 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 8 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 8 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 17 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >4aso_ABC:"Winged_helix"_DNA-binding_domain; title=TUBR BOUND TO 24 BP OF TUBC FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS organism=BACILLUS THURINGIENSIS DNA sequence DG(T1):DC(S24) DT(T2):DA(S23) DT(T3):DA(S22) DA(T4):DT(S21) DA(T5):DT(S20) DA(T6):DT(S19) DC(T7):DG(S18) DT(T8):DA(S17) DG(T9):DC(S16) DA(T10):DT(S15) DA(T11):DT(S14) DA(T12):DT(S13) DG(T13):DC(S12) DT(T14):DA(S11) DT(T15):DA(S10) DA(T16):DT(S9) DA(T17):DT(S8) DA(T18):DT(S7) DC(T19):DG(S6) DT(T20):DA(S5) DT(T21):DA(S4) DA(T22):DT(S3) DA(T23):DT(S2) DA(T24):DT(S1) chainA ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 chainB ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 chainC ( 48) SER53 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPtvfatvnsfycagyidetrvgrskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPtvfatvnsfycagyidetrvgrskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPtvfatvnsfycagyidetrvgrskiytlsdlgveivecfkqka >4aso_EFG:"Winged_helix"_DNA-binding_domain; title=TUBR BOUND TO 24 BP OF TUBC FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS organism=BACILLUS THURINGIENSIS DNA sequence DG(V1):DC(U24) DT(V2):DA(U23) DT(V3):DA(U22) DA(V4):DT(U21) DA(V5):DT(U20) DA(V6):DT(U19) DC(V7):DG(U18) DT(V8):DA(U17) DG(V9):DC(U16) DA(V10):DT(U15) DA(V11):DT(U14) DA(V12):DT(U13) DG(V13):DC(U12) DT(V14):DA(U11) DT(V15):DA(U10) DA(V16):DT(U9) DA(V17):DT(U8) DA(V18):DT(U7) DC(V19):DG(U6) DT(V20):DA(U5) DT(V21):DA(U4) DA(V22):DT(U3) DA(V23):DT(U2) DA(V24):DT(U1) chainE ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 ( 53) PHE58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainF ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 3 14 1 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 6 0 0 0 0 0 0 0 0 ( 51) THR56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 53) PHE58 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 72) ARG77 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 48) SER53 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPtvFatvnsfycagyidetrvgrskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPTvFatvnsfycagyidetrvgRskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPtvfatvnsfycagyidetrvgrskiytlsdlgveivecfkqka >4aso_F:"Winged_helix"_DNA-binding_domain; title=TUBR BOUND TO 24 BP OF TUBC FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS organism=BACILLUS THURINGIENSIS DNA sequence DG(V1):DC(U24) DT(V2):DA(U23) DT(V3):DA(U22) DA(V4):DT(U21) DA(V5):DT(U20) DA(V6):DT(U19) DC(V7):DG(U18) DT(V8):DA(U17) DG(V9):DC(U16) DA(V10):DT(U15) DA(V11):DT(U14) DA(V12):DT(U13) DG(V13):DC(U12) DT(V14):DA(U11) DT(V15):DA(U10) DA(V16):DT(U9) DA(V17):DT(U8) DA(V18):DT(U7) DC(V19):DG(U6) DT(V20):DA(U5) DT(V21):DA(U4) DA(V22):DT(U3) DA(V23):DT(U2) DA(V24):DT(U1) chainF ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 3 14 1 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 6 0 0 0 0 0 0 0 0 ( 51) THR56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 53) PHE58 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 72) ARG77 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPTvFatvnsfycagyidetrvgRskiytlsdlgveivecfkqka >4aso_HL:"Winged_helix"_DNA-binding_domain; title=TUBR BOUND TO 24 BP OF TUBC FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS organism=BACILLUS THURINGIENSIS DNA sequence DT(U1):DA(V24) DT(U2):DA(V23) DT(U3):DA(V22) DA(U4):DT(V21) DA(U5):DT(V20) DG(U6):DC(V19) DT(U7):DA(V18) DT(U8):DA(V17) DT(U9):DA(V16) DA(U10):DT(V15) DA(U11):DT(V14) DC(U12):DG(V13) DT(U13):DA(V12) DT(U14):DA(V11) DT(U15):DA(V10) DC(U16):DG(V9) DA(U17):DT(V8) DG(U18):DC(V7) DT(U19):DA(V6) DT(U20):DA(V5) DT(U21):DA(V4) DA(U22):DT(V3) DA(U23):DT(V2) DC(U24):DG(V1) DT(W1):DA(X24) DT(W2):DA(X23) DT(W3):DA(X22) DA(W4):DT(X21) DA(W5):DT(X20) DG(W6):DC(X19) DT(W7):DA(X18) DT(W8):DA(X17) DT(W9):DA(X16) DA(W10):DT(X15) DA(W11):DT(X14) DC(W12):DG(X13) DT(W13):DA(X12) DT(W14):DA(X11) DT(W15):DA(X10) DC(W16):DG(X9) DA(W17):DT(X8) DG(W18):DC(X7) DT(W19):DA(X6) DT(W20):DA(X5) DT(W21):DA(X4) DA(W22):DT(X3) DA(W23):DT(X2) DC(W24):DG(X1) DT(Y1):DA(Z24) DT(Y2):DA(Z23) DT(Y3):DA(Z22) DA(Y4):DT(Z21) DA(Y5):DT(Z20) DG(Y6):DC(Z19) DT(Y7):DA(Z18) DT(Y8):DA(Z17) DT(Y9):DA(Z16) DA(Y10):DT(Z15) DA(Y11):DT(Z14) DC(Y12):DG(Z13) DT(Y13):DA(Z12) DT(Y14):DA(Z11) DT(Y15):DA(Z10) DC(Y16):DG(Z9) DA(Y17):DT(Z8) DG(Y18):DC(Z7) DT(Y19):DA(Z6) DT(Y20):DA(Z5) DT(Y21):DA(Z4) DA(Y22):DT(Z3) DA(Y23):DT(Z2) DC(Y24):DG(Z1) chainH ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) THR56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPtvfatvnsfycagyidetrvgrskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPTvfatvnsfycagyidetrvgrskiytlsdlgveivecfkqka >4aso_IJK:"Winged_helix"_DNA-binding_domain; title=TUBR BOUND TO 24 BP OF TUBC FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS organism=BACILLUS THURINGIENSIS DNA sequence DG(X1):DC(W24) DT(X2):DA(W23) DT(X3):DA(W22) DA(X4):DT(W21) DA(X5):DT(W20) DA(X6):DT(W19) DC(X7):DG(W18) DT(X8):DA(W17) DG(X9):DC(W16) DA(X10):DT(W15) DA(X11):DT(W14) DA(X12):DT(W13) DG(X13):DC(W12) DT(X14):DA(W11) DT(X15):DA(W10) DA(X16):DT(W9) DA(X17):DT(W8) DA(X18):DT(W7) DC(X19):DG(W6) DT(X20):DA(W5) DT(X21):DA(W4) DA(X22):DT(W3) DA(X23):DT(W2) DA(X24):DT(W1) chainI ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 9 0 0 0 0 0 0 ( 51) THR56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 53) PHE58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 chainJ ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 1 0 0 0 0 0 0 0 0 ( 51) THR56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainK ( 39) THR44 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) SER53 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 5 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 1 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) THR56 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) PHE58 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPTvFatvnsfycagyidetrvgrskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPTvfatvnsfycagyidetrvgrskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnkTavaemiqlSKPTvFatvnsfycagyidetrvgrskiytlsdlgveivecfkqka >4aso_MNOP:"Winged_helix"_DNA-binding_domain; title=TUBR BOUND TO 24 BP OF TUBC FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS organism=BACILLUS THURINGIENSIS DNA sequence DG(Z1):DC(Y24) DT(Z2):DA(Y23) DT(Z3):DA(Y22) DA(Z4):DT(Y21) DA(Z5):DT(Y20) DA(Z6):DT(Y19) DC(Z7):DG(Y18) DT(Z8):DA(Y17) DG(Z9):DC(Y16) DA(Z10):DT(Y15) DA(Z11):DT(Y14) DA(Z12):DT(Y13) DG(Z13):DC(Y12) DT(Z14):DA(Y11) DT(Z15):DA(Y10) DA(Z16):DT(Y9) DA(Z17):DT(Y8) DA(Z18):DT(Y7) DC(Z19):DG(Y6) DT(Z20):DA(Y5) DT(Z21):DA(Y4) DA(Z22):DT(Y3) DA(Z23):DT(Y2) DA(Z24):DT(Y1) chainM ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 chainN ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 ( 51) THR56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 72) ARG77 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 39) THR44 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) SER53 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 2 14 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) THR56 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) PHE58 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 48) SER53 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS54 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) PHE58 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPtvfatvnsfycagyidetrvgrskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPTvfatvnsfycagyidetrvgRskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnkTavaemiqlSKPTvFatvnsfycagyidetrvgrskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPtvFatvnsfycagyidetrvgrskiytlsdlgveivecfkqka >4ass_EFGHI:"Winged_helix"_DNA-binding_domain; title=TUBR BOUND TO TUBC - 26 BP - FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS organism=BACILLUS THURINGIENSIS DNA sequence DC(Y1):DG(Z26) DT(Y2):DA(Z25) DT(Y3):DA(Z24) DT(Y4):DA(Z23) DA(Y5):DT(Z22) DA(Y6):DT(Z21) DG(Y7):DC(Z20) DT(Y8):DA(Z19) DT(Y9):DA(Z18) DT(Y10):DA(Z17) DA(Y11):DT(Z16) DA(Y12):DT(Z15) DC(Y13):DG(Z14) DT(Y14):DA(Z13) DT(Y15):DA(Z12) DT(Y16):DA(Z11) DC(Y17):DG(Z10) DA(Y18):DT(Z9) DG(Y19):DC(Z8) DT(Y20):DA(Z7) DT(Y21):DA(Z6) DT(Y22):DA(Z5) DA(Y23):DT(Z4) DC(Y24):DG(Z3) DA(Y25):DT(Z2) DT(Y26):DA(Z1) chainE ( 49) LYS54 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 48) SER53 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) PHE58 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG77 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 39) THR44 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 8 19 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 22 9 0 0 0 0 0 0 0 0 0 0 0 ( 53) PHE58 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG77 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 39) THR44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 11 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 3 0 0 0 0 0 0 0 0 0 ( 51) THR56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 53) PHE58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 ( 72) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 chainI ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 72) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 15 0 0 0 0 0 prot.sequence fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlsKPtvfatvnsfycagyidetrvgrskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPtvFatvnsfycagyidetrvgRskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnkTavaemiqlSKPtvFatvnsfycagyidetrvgRskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnkTavaemiqlSKPTvFatvnsfycagyidetrvgRskiytlsdlgveivecfkqka/fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlsKptvfatvnsfycagyidetrvgRskiytlsdlgveivecfkqka >4ass_G:"Winged_helix"_DNA-binding_domain; title=TUBR BOUND TO TUBC - 26 BP - FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS organism=BACILLUS THURINGIENSIS DNA sequence DC(Y1):DG(Z26) DT(Y2):DA(Z25) DT(Y3):DA(Z24) DT(Y4):DA(Z23) DA(Y5):DT(Z22) DA(Y6):DT(Z21) DG(Y7):DC(Z20) DT(Y8):DA(Z19) DT(Y9):DA(Z18) DT(Y10):DA(Z17) DA(Y11):DT(Z16) DA(Y12):DT(Z15) DC(Y13):DG(Z14) DT(Y14):DA(Z13) DT(Y15):DA(Z12) DT(Y16):DA(Z11) DC(Y17):DG(Z10) DA(Y18):DT(Z9) DG(Y19):DC(Z8) DT(Y20):DA(Z7) DT(Y21):DA(Z6) DT(Y22):DA(Z5) DA(Y23):DT(Z4) DC(Y24):DG(Z3) DA(Y25):DT(Z2) DT(Y26):DA(Z1) chainG ( 39) THR44 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) SER53 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS54 0 0 0 0 0 0 0 0 0 0 0 8 19 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 22 9 0 0 0 0 0 0 0 0 0 0 0 ( 53) PHE58 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG77 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fytlniaeiaerignddcayqvlmafinengeaqmlnkTavaemiqlSKPtvFatvnsfycagyidetrvgRskiytlsdlgveivecfkqka >4ati_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=MITF:M-BOX COMPLEX organism=MUS MUSCULUS DNA sequence DG(C1):DC(D16) DT(C2):DA(D15) DT(C3):DA(D14) DA(C4):DT(D13) DG(C5):DC(D12) DC(C6):DG(D11) DA(C7):DT(D10) DC(C8):DG(D9) DA(C9):DT(D8) DT(C10):DA(D7) DG(C11):DC(D6) DA(C12):DT(D5) DC(C13):DG(D4) DC(C14):DG(D3) DC(C15):DG(D2) DT(C16):DA(D1) chainA ( 1) HIS209 0 0 0 0 0 0 0 0 0 1 7 12 0 0 0 0 ( 2) ASN210 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 4) ILE212 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 ( 5) GLU213 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 ( 8) ARG216 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 ( 9) ARG217 0 0 0 0 0 0 0 4 10 5 1 0 0 0 0 0 chainB ( 7) HIS209 0 0 0 7 5 14 0 0 0 0 0 0 0 0 0 0 ( 8) ASN210 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 10) ILE212 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) GLU213 0 0 0 0 1 6 9 0 0 0 0 0 0 0 0 0 ( 14) ARG216 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 ( 15) ARG217 0 0 0 0 0 0 0 4 11 0 0 0 0 0 0 0 prot.sequence HNlIErrRRfnindrikelgtlipksmrwnkgtilkasvdyirklqreqqrakdlen/rqkkdnHNlIErrRRfnindrikelgtlipksdpdmrwnkgtilkasvdyirklqreqqrakdlenrqkkl >4ati_B:HLH,_helix-loop-helix_DNA-binding_domain; title=MITF:M-BOX COMPLEX organism=MUS MUSCULUS DNA sequence DG(C1):DC(D16) DT(C2):DA(D15) DT(C3):DA(D14) DA(C4):DT(D13) DG(C5):DC(D12) DC(C6):DG(D11) DA(C7):DT(D10) DC(C8):DG(D9) DA(C9):DT(D8) DT(C10):DA(D7) DG(C11):DC(D6) DA(C12):DT(D5) DC(C13):DG(D4) DC(C14):DG(D3) DC(C15):DG(D2) DT(C16):DA(D1) chainB ( 7) HIS209 0 0 0 7 5 14 0 0 0 0 0 0 0 0 0 0 ( 8) ASN210 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 10) ILE212 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) GLU213 0 0 0 0 1 6 9 0 0 0 0 0 0 0 0 0 ( 14) ARG216 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 ( 15) ARG217 0 0 0 0 0 0 0 4 11 0 0 0 0 0 0 0 prot.sequence rqkkdnHNlIErrRRfnindrikelgtlipksdpdmrwnkgtilkasvdyirklqreqqrakdlenrqkkl >4atk_A:HLH,_helix-loop-helix_DNA-binding_domain; title=MITF:E-BOX COMPLEX organism=MUS MUSCULUS DNA sequence DA(C1):DT(D16) DG(C2):DC(D15) DT(C3):DA(D14) DA(C4):DT(D13) DG(C5):DC(D12) DC(C6):DG(D11) DA(C7):DT(D10) DC(C8):DG(D9) DG(C9):DC(D8) DT(C10):DA(D7) DG(C11):DC(D6) DC(C12):DG(D5) DT(C13):DA(D4) DA(C14):DT(D3) DC(C15):DG(D2) DT(C16):DA(D1) chainA ( 3) HIS209 0 0 0 0 0 0 0 0 0 0 2 12 7 0 0 0 ( 4) ASN210 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 7) GLU213 0 0 0 0 0 0 0 0 0 1 9 19 1 0 0 0 ( 10) ARG216 0 0 0 0 0 0 0 0 3 4 6 0 0 0 0 0 ( 11) ARG217 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 prot.sequence dnHNliErrRRfnindrikelgtlipkdpdmrwnkgtilkasvdyirklqreqqrakdle >4atk_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=MITF:E-BOX COMPLEX organism=MUS MUSCULUS DNA sequence DA(D1):DT(C16) DG(D2):DC(C15) DT(D3):DA(C14) DA(D4):DT(C13) DG(D5):DC(C12) DC(D6):DG(C11) DA(D7):DT(C10) DC(D8):DG(C9) DG(D9):DC(C8) DT(D10):DA(C7) DG(D11):DC(C6) DC(D12):DG(C5) DT(D13):DA(C4) DA(D14):DT(C3) DC(D15):DG(C2) DT(D16):DA(C1) chainA ( 3) HIS209 0 0 0 7 12 2 0 0 0 0 0 0 0 0 0 0 ( 4) ASN210 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 7) GLU213 0 0 0 1 19 9 1 0 0 0 0 0 0 0 0 0 ( 10) ARG216 0 0 0 0 0 6 4 3 0 0 0 0 0 0 0 0 ( 11) ARG217 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 chainB ( 5) HIS209 0 0 0 0 0 0 0 0 0 4 12 7 0 0 0 0 ( 6) ASN210 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 9) GLU213 0 0 0 0 0 0 0 0 6 12 10 0 0 0 0 0 ( 12) ARG216 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 ( 13) ARG217 0 0 0 0 0 0 0 16 6 1 0 0 0 0 0 0 prot.sequence dnHNliErrRRfnindrikelgtlipkdpdmrwnkgtilkasvdyirklqreqqrakdle/kkdnHNliErrRRfnindrikelgtlipksndpdmrwnkgtilkasvdyirklqreqqra >4auw_AB:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF THE BZIP HOMODIMERIC MAFB IN COMPLEX WITH THE C- MARE BINDING SITE organism=MUS MUSCULUS DNA sequence DA(C2):DT(D21) DA(C3):DT(D20) DT(C4):DA(D19) DT(C5):DA(D18) DG(C6):DC(D17) DC(C7):DG(D16) DT(C8):DA(D15) DG(C9):DC(D14) DA(C10):DT(D13) DC(C11):DG(D12) DG(C12):DC(D11) DT(C13):DA(D10) DC(C14):DG(D9) DA(C15):DT(D8) DG(C16):DC(D7) DC(C17):DG(D6) DA(C18):DT(D5) DT(C19):DA(D4) DT(C20):DA(D3) DA(C21):DT(D2) chainA ( 33) ARG244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 16 0 0 0 ( 37) ASN248 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 ( 40) TYR251 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 5 0 0 0 0 ( 41) ALA252 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 44) CYS255 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 45) ARG256 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 ( 48) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 chainB ( 32) ARG244 0 0 0 14 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN248 0 0 0 0 0 5 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR251 0 0 0 0 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA252 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 43) CYS255 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG256 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 prot.sequence sddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykRvqqkhhlenektqliqqveqlkqevsrlarerdaykvks/ddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvk >4auw_B:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF THE BZIP HOMODIMERIC MAFB IN COMPLEX WITH THE C- MARE BINDING SITE organism=MUS MUSCULUS DNA sequence DT(D2):DA(C21) DA(D3):DT(C20) DA(D4):DT(C19) DT(D5):DA(C18) DG(D6):DC(C17) DC(D7):DG(C16) DT(D8):DA(C15) DG(D9):DC(C14) DA(D10):DT(C13) DC(D11):DG(C12) DG(D12):DC(C11) DT(D13):DA(C10) DC(D14):DG(C9) DA(D15):DT(C8) DG(D16):DC(C7) DC(D17):DG(C6) DA(D18):DT(C5) DA(D19):DT(C4) DT(D20):DA(C3) DT(D21):DA(C2) chainB ( 32) ARG244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 14 0 0 0 ( 36) ASN248 0 0 0 0 0 0 0 0 0 0 0 0 1 2 5 0 0 0 0 0 ( 39) TYR251 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 7 0 0 0 0 ( 40) ALA252 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 43) CYS255 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 44) ARG256 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 prot.sequence ddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvk >4auw_EF:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF THE BZIP HOMODIMERIC MAFB IN COMPLEX WITH THE C- MARE BINDING SITE organism=MUS MUSCULUS DNA sequence DT(G2):DA(H21) DA(G3):DT(H20) DA(G4):DT(H19) DT(G5):DA(H18) DG(G6):DC(H17) DC(G7):DG(H16) DT(G8):DA(H15) DG(G9):DC(H14) DA(G10):DT(H13) DC(G11):DG(H12) DG(G12):DC(H11) DT(G13):DA(H10) DC(G14):DG(H9) DA(G15):DT(H8) DG(G16):DC(H7) DC(G17):DG(H6) DA(G18):DT(H5) DA(G19):DT(H4) DT(G20):DA(H3) DT(G21):DA(H2) chainE ( 35) ARG244 0 0 0 10 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ASN248 0 0 0 0 0 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR251 0 0 0 0 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ALA252 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 46) CYS255 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG256 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 chainF ( 35) ARG244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 15 0 0 0 ( 39) ASN248 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 ( 42) TYR251 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 8 0 0 0 0 ( 43) ALA252 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 46) CYS255 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 47) ARG256 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 prot.sequence mfsddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvkse/mfsddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvks >4av1_ABCD:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN PARP-1 DNA BINDING DOMAIN IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DA(X2):DT(Y12) DG(X3):DC(Y11) DT(X4):DA(Y10) DG(X5):DC(Y9) DT(X6):DA(Y8) DT(X7):DA(Y7) DG(X8):DC(Y6) DC(X9):DG(Y5) DA(X10):DT(Y4) DT(X11):DA(Y3) DT(X12):DA(Y2) chainA ( 11) SER16 0 2 2 0 0 0 0 0 0 0 0 ( 13) ARG18 5 16 12 1 0 0 0 0 0 0 0 chainB ( 16) ARG122 0 0 2 3 0 0 0 0 0 0 0 ( 42) LYS148 1 1 0 0 0 0 0 0 0 0 0 ( 45) LEU151 11 0 0 0 0 0 0 0 0 0 0 ( 48) ILE154 5 0 0 0 0 0 0 0 0 0 0 chainC ( 11) SER16 0 0 0 0 0 0 0 0 2 1 0 ( 13) ARG18 0 0 0 0 0 0 0 1 15 12 4 chainD ( 15) ARG122 0 0 0 0 0 0 0 5 2 0 0 ( 41) LYS148 0 0 0 0 0 0 0 0 0 0 1 ( 44) LEU151 0 0 0 0 0 0 0 0 0 0 12 ( 47) ILE154 0 0 0 0 0 0 0 0 0 0 7 prot.sequence dklyrveyakSgRasckkcsesipkdslrmaimvqspmfdgkvphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaea/ektlgdfaaeyaksnRstckgcmekiekgqvrlskkmvdpeKpqLgmIdrwyhpgcfvknreelgfrpeysasqlkgfsllatedkealkkqlpgv/dklyrveyakSgRasckkcsesipkdslrmaimvqspmfdgkvphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktae/ktlgdfaaeyaksnRstckgcmekiekgqvrlskkmvdpeKpqLgmIdrwyhpgcfvknreelgfrpeysasqlkgfsllatedkealkkqlpgv >4av1_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN PARP-1 DNA BINDING DOMAIN IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DA(Y2):DT(X12) DA(Y3):DT(X11) DT(Y4):DA(X10) DG(Y5):DC(X9) DC(Y6):DG(X8) DA(Y7):DT(X7) DA(Y8):DT(X6) DC(Y9):DG(X5) DA(Y10):DT(X4) DC(Y11):DG(X3) DT(Y12):DA(X2) chainB ( 16) ARG122 0 0 0 0 0 0 0 3 2 0 0 ( 42) LYS148 0 0 0 0 0 0 0 0 0 1 1 ( 45) LEU151 0 0 0 0 0 0 0 0 0 0 11 ( 48) ILE154 0 0 0 0 0 0 0 0 0 0 5 prot.sequence ektlgdfaaeyaksnRstckgcmekiekgqvrlskkmvdpeKpqLgmIdrwyhpgcfvknreelgfrpeysasqlkgfsllatedkealkkqlpgv >4awl_A: title=THE NF-Y TRANSCRIPTION FACTOR IS STRUCTURALLY AND FUNCTIONALLY A SEQUENCE SPECIFIC HISTONE organism=HOMO SAPIENS DNA sequence DA(J-25):DT(I25) DT(J-24):DA(I24) DC(J-23):DG(I23) DG(J-22):DC(I22) DA(J-21):DT(I21) DG(J-20):DC(I20) DC(J-19):DG(I19) DT(J-18):DA(I18) DC(J-17):DG(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DT(J-14):DA(I14) DG(J-13):DC(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DT(J-10):DA(I10) DG(J-9):DC(I9) DG(J-8):DC(I8) DC(J-7):DG(I7) DT(J-6):DA(I6) DC(J-5):DG(I5) DA(J-4):DT(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) chainA ( 43) ARG274 0 0 0 0 0 0 0 0 0 0 0 4 6 3 1 0 0 0 0 0 0 0 0 0 0 ( 46) HIS277 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 ( 50) ARG281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 5 0 0 0 0 0 0 0 0 0 ( 52) ARG283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 ( 57) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 58) PHE289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 25 0 0 0 0 0 0 0 0 prot.sequence meeplyvnakqyhrilkrrqarakleaegkipkerrkylhesRhrHamaRkRgeggRFfspk >4awl_ABC:Histone-fold; title=THE NF-Y TRANSCRIPTION FACTOR IS STRUCTURALLY AND FUNCTIONALLY A SEQUENCE SPECIFIC HISTONE organism=HOMO SAPIENS DNA sequence DA(J-25):DT(I25) DT(J-24):DA(I24) DC(J-23):DG(I23) DG(J-22):DC(I22) DA(J-21):DT(I21) DG(J-20):DC(I20) DC(J-19):DG(I19) DT(J-18):DA(I18) DC(J-17):DG(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DT(J-14):DA(I14) DG(J-13):DC(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DT(J-10):DA(I10) DG(J-9):DC(I9) DG(J-8):DC(I8) DC(J-7):DG(I7) DT(J-6):DA(I6) DC(J-5):DG(I5) DA(J-4):DT(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) chainA ( 43) ARG274 0 0 0 0 0 0 0 0 0 0 0 4 6 3 1 0 0 0 0 0 0 0 0 0 0 ( 46) HIS277 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 ( 50) ARG281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 5 0 0 0 0 0 0 0 0 0 ( 52) ARG283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 ( 57) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 58) PHE289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 25 0 0 0 0 0 0 0 0 chainB ( 11) ALA60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainC prot.sequence meeplyvnakqyhrilkrrqarakleaegkipkerrkylhesRhrHamaRkRgeggRFfspk/freqdiylpiAnvarimknaipqtgkiakdakecvqecvsefisfitseaserchqekrktingedilfamstlgfdsyveplklylqkfre/vqelplarikKimkldedvkmisaeapvlfakaaqifiteltlrawihtednkrrtlqrndiamaitkfdqfdflidivp >4awl_B:Histone-fold; title=THE NF-Y TRANSCRIPTION FACTOR IS STRUCTURALLY AND FUNCTIONALLY A SEQUENCE SPECIFIC HISTONE organism=HOMO SAPIENS DNA sequence DT(I1):DA(J-1) DT(I2):DA(J-2) DC(I3):DG(J-3) DT(I4):DA(J-4) DG(I5):DC(J-5) DA(I6):DT(J-6) DG(I7):DC(J-7) DC(I8):DG(J-8) DC(I9):DG(J-9) DA(I10):DT(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DC(I13):DG(J-13) DA(I14):DT(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DG(I17):DC(J-17) DA(I18):DT(J-18) DG(I19):DC(J-19) DC(I20):DG(J-20) DT(I21):DA(J-21) DC(I22):DG(J-22) DG(I23):DC(J-23) DA(I24):DT(J-24) DT(I25):DA(J-25) chainB ( 11) ALA60 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence freqdiylpiAnvarimknaipqtgkiakdakecvqecvsefisfitseaserchqekrktingedilfamstlgfdsyveplklylqkfre >4b21_A:DNA-glycosylase; title=UNPRECEDENTED SCULPTING OF DNA AT ABASIC SITES BY DNA GLYCOSYLASE HOMOLOG MAG2 organism=SCHIZOSACCHAROMYCES POMBE DNA sequence DC(X2):DG(Y21) DT(X3):DA(Y20) DA(X4):DT(Y19) DC(X5):DG(Y18) 3DR(X6):DG(Y17) DG(X7):DC(Y16) DA(X8):DT(Y15) DT(X9):DA(Y14) DC(X10):DG(Y13) DG(X11):DC(Y12) chainA ( 51) GLN52 0 0 0 0 0 5 0 0 0 0 ( 52) LYS53 0 0 0 8 6 21 0 0 0 0 ( 53) LEU54 0 0 0 0 10 12 0 0 0 0 ( 54) SER55 0 0 0 8 4 0 0 0 0 0 ( 57) ALA58 0 0 0 0 4 0 0 0 0 0 ( 95) SER96 0 0 0 0 0 7 0 0 0 0 ( 97) LEU98 0 0 0 0 0 0 1 3 0 0 ( 98) LYS99 0 0 0 0 0 12 0 0 0 0 prot.sequence skdsdykraekhlssidnkwsslvkkvgpctltphpehapyegiiraitsQKLSdaAtnsiinkfctqcsdndefptpkqimetdvetlhecgfSkLKsqeihivaeaalnkqipskseiekmseeelmeslskikgvkrwtiemysiftlgrldimpaddstlkneakeffglsskpqteevekltkpckpyrtiaawylwqipkl >4b22_A:DNA-glycosylase; title=UNPRECEDENTED SCULPTING OF DNA AT ABASIC SITES BY DNA GLYCOSYLASE HOMOLOG MAG2 organism=SCHIZOSACCHAROMYCES POMBE DNA sequence DG(X1):DC(Y22) DC(X2):DG(Y21) DT(X3):DA(Y20) DA(X4):DT(Y19) DC(X5):DG(Y18) 3DR(X6):DG(Y17) DC(X7):DG(Y16) DA(X8):DT(Y15) DT(X9):DA(Y14) DC(X10):DG(Y13) DG(X11):DC(Y12) chainA ( 49) GLN52 0 0 0 0 0 0 7 0 0 0 0 ( 50) LYS53 0 0 0 0 8 5 25 0 0 0 0 ( 51) LEU54 0 0 0 0 0 11 2 0 0 0 0 ( 52) SER55 0 0 0 0 8 4 0 0 0 0 0 ( 55) ALA58 0 0 0 0 0 4 0 0 0 0 0 ( 93) SER96 0 0 0 0 0 0 6 0 0 0 0 ( 95) LEU98 0 0 0 0 0 0 0 2 3 0 0 ( 96) LYS99 0 0 0 0 0 0 10 0 0 0 0 prot.sequence dsdykraekhlssidnkwsslvkkvgpctltphpehapyegiiraitsQKLSdaAtnsiinkfctqcsdndefptpkqimetdvetlhecgfSkLKsqeihivaeaalnkqipskseiekmseeelmeslskikgvkrwtiemysiftlgrldimpaddstlkneakeffglsskpqteevekltkpckpyrtiaawylwqipkl >4b23_A:DNA-glycosylase; title=UNPRECEDENTED SCULPTING OF DNA AT ABASIC SITES BY DNA GLYCOSYLASE HOMOLOG MAG2 organism=SCHIZOSACCHAROMYCES POMBE DNA sequence DG(X1):DC(Y22) DC(X2):DG(Y21) DT(X3):DA(Y20) DA(X4):DT(Y19) DC(X5):DG(Y18) 3DR(X6):DG(Y17) DA(X7):DT(Y16) DA(X8):DT(Y15) DT(X9):DA(Y14) DC(X10):DG(Y13) DG(X11):DC(Y12) chainA ( 51) LYS53 0 0 0 0 8 5 20 0 0 0 0 ( 52) LEU54 0 0 0 0 0 9 13 0 0 0 0 ( 53) SER55 0 0 0 0 8 4 0 0 0 0 0 ( 56) ALA58 0 0 0 0 0 4 0 0 0 0 0 ( 94) SER96 0 0 0 0 0 0 4 0 0 0 0 ( 96) LEU98 0 0 0 0 0 0 0 2 3 0 0 ( 97) LYS99 0 0 0 0 0 0 7 0 0 0 0 prot.sequence kdsdykraekhlssidnkwsslvkkvgpctltphpehapyegiiraitsQKLSdaAtnsiinkfctqcsdndefptpkqimetdvetlhecgfSkLKsqeihivaeaalnkqipskseiekmseeelmeslskikgvkrwtiemysiftlgrldimpaddstlkneakeffglsskpqteevekltkpckpyrtiaawylwqipkl >4b24_A:DNA-glycosylase; title=UNPRECEDENTED SCULPTING OF DNA AT ABASIC SITES BY DNA GLYCOSYLASE HOMOLOG MAG2 organism=SCHIZOSACCHAROMYCES POMBE DNA sequence DC(X2):DG(Y21) DT(X3):DA(Y20) DA(X4):DT(Y19) DC(X5):DG(Y18) 3DR(X6):DG(Y17) DT(X7):DA(Y16) DA(X8):DT(Y15) DT(X9):DA(Y14) DC(X10):DG(Y13) DG(X11):DC(Y12) chainA ( 50) GLN52 0 0 0 0 0 5 0 0 0 0 ( 51) LYS53 0 0 0 6 3 27 0 0 0 0 ( 52) LEU54 0 0 0 0 12 3 0 0 0 0 ( 53) SER55 0 0 0 8 4 0 0 0 0 0 ( 56) ALA58 0 0 0 0 4 0 0 0 0 0 ( 94) SER96 0 0 0 0 0 3 0 0 0 0 ( 96) LEU98 0 0 0 0 0 0 2 3 0 0 ( 97) LYS99 0 0 0 0 0 7 0 0 0 0 prot.sequence kdsdykraekhlssidnkwsslvkkvgpctltphpehapyegiiraitsQKLSdaAtnsiinkfctqcsdndefptpkqimetdvetlhecgfSkLKsqeihivaeaalnkqipskseiekmseeelmeslskikgvkrwtiemysiftlgrldimpaddstlkneakeffglsskpqteevekltkpckpyrtiaawylwqipkl >4b3o_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURES OF HIV-1 RT AND RNA-DNA COMPLEX REVEAL A UNIQUE RT CONFORMATION AND SUBSTRATE INTERFACE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(D2) DA(D3) DT(D4) DG(D5) DC(D6) DC(D7) DT(D8) DA(D9) DT(D10) DA(D11) DG(D12) DT(D13) DT(D14) DA(D15) DT(D16) DT(D17) DG(D18) DT(D19) DG(D20) DG(D21) DC(D22) DC(D23) chainA (214) MET230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (249) ASN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (342) ARG358 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (432) ARG448 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (459) GLN475 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (397) ASN418 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmRgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvntpplvklwyqlekepivgaetfyvdgaasRetklgkagyvtnkgrqkvvtltdttnQktelqaihlalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagi/tvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdgtkwrklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwgltgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvNtpplvklwyqlek >4b3o_B:DNA/RNA_polymerases; title=STRUCTURES OF HIV-1 RT AND RNA-DNA COMPLEX REVEAL A UNIQUE RT CONFORMATION AND SUBSTRATE INTERFACE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(D2) DA(D3) DT(D4) DG(D5) DC(D6) DC(D7) DT(D8) DA(D9) DT(D10) DA(D11) DG(D12) DT(D13) DT(D14) DA(D15) DT(D16) DT(D17) DG(D18) DT(D19) DG(D20) DG(D21) DC(D22) DC(D23) chainB (397) ASN418 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdgtkwrklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwgltgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvNtpplvklwyqlek >4b3p_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURES OF HIV-1 RT AND RNA-DNA COMPLEX REVEAL A UNIQUE RT CONFORMATION AND SUBSTRATE INTERFACE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(D1) DT(D2) DG(D3) DG(D4) DT(D5) DC(D6) DG(D7) DT(D8) DA(D9) DT(D10) DG(D11) DC(D12) DC(D13) DT(D14) DA(D15) DT(D16) DA(D17) DG(D18) DT(D19) DT(D20) DA(D21) chainA (413) ARG448 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) GLN475 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvedfrkytaftiinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvntpplvklwyqlekepivgaetfyvdgaasRetklgkagyvtnkgrqkvvtltdttnQktelqaihlalqdsglevnivtasqyalgiiqaqpdqseselvnqiieqlikkekvylvpahkgiggneqvdklvsagi/tvpvklkpgmkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdgtkwrklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpiyqymddlyvgsdleigqhrtkieelrqhllrwgltgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvntpplvklwyqlek >4b3q_B:DNA/RNA_polymerases; title=STRUCTURES OF HIV-1 RT AND RNA-DNA COMPLEX REVEAL A UNIQUE RT CONFORMATION AND SUBSTRATE INTERFACE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DA(D3) DT(D4) DG(D5) DC(D6) DC(D7) DT(D8) DA(D9) DT(D10) DA(D11) DG(D12) DT(D13) DT(D14) DA(D15) DT(D16) DT(D17) DG(D18) DT(D19) DG(D20) DG(D21) DC(D22) DC(D23) chainB (397) ASN418 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdgtkwrklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwgltgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvNtpplvklwyqlek >4b5f_A:DNase_I-like; title=SUBSTRATE BOUND NEISSERIA AP ENDONUCLEASE IN ABSENCE OF METAL IONS (CRYSTAL FORM 1) organism=NEISSERIA MENINGITIDIS DNA sequence DG(U31):DC(V52) DC(U32):DG(V51) DT(U33):DA(V50) DA(U34):DT(V49) DC(U35):DG(V48) 3DR(U36):DG(V47) DG(U37):DC(V46) DA(U38):DT(V45) DT(U39):DA(V44) DC(U40):DG(V43) DG(U41):DC(V42) chainA (115) SER115 0 0 0 0 6 0 0 0 0 0 0 (161) ASN161 0 0 0 0 0 0 0 0 1 0 0 (168) ASN168 0 0 0 0 0 0 7 0 0 0 0 (207) ASN207 0 0 0 0 44 10 0 0 0 0 0 (208) ARG208 0 0 0 0 0 32 30 0 0 0 0 prot.sequence mlkiisanvngirsaykkgfyeyiaasgadivcvqelKaqeadlsadmknphgmhghwhcaekrgysgvavyskrkpdnvqigmgieefdregrfvrcdfgrlsvislylpsgsSaeerqqvkyrfldafypmleamknegrdivvcgdwniahqnidlkNwkgnqkNsgflpeerewigkvihklgwtdmwrtlypdvpgytwwsNRgqayakdvgwridyqmvtpelaakavsahvykdekfsdhaplvveydy >4b5g_A:DNase_I-like; title=SUBSTRATE BOUND NEISSERIA AP ENDONUCLEASE IN ABSENCE OF METAL IONS (CRYSTAL FORM 2) organism=NEISSERIA MENINGITIDIS DNA sequence DC(V42):DG(U41) DG(V43):DC(U40) DA(V44):DT(U39) DT(V45):DA(U38) DG(V46):DC(U37) DG(V47):3DR(U36) DG(V48):DC(U35) DT(V49):DA(U34) DA(V50):DT(U33) DG(V51):DC(U32) DC(V52):DG(U31) chainA (115) SER115 0 0 0 0 0 0 2 0 0 0 0 (168) ASN168 0 0 0 0 12 0 0 0 0 0 0 (206) SER206 0 0 0 0 0 1 0 0 0 0 0 (207) ASN207 0 0 0 0 0 10 18 0 0 0 0 (208) ARG208 0 0 0 1 38 25 0 0 0 0 0 prot.sequence mlkiisanvngirsaykkgfyeyiaasgadivcvqelkaqeadlsadmknphgmhghwhcaekrgysgvavyskrkpdnvqigmgieefdregrfvrcdfgrlsvislylpsgsSaeerqqvkyrfldafypmleamknegrdivvcgdwniahqnidlknwkgnqkNsgflpeerewigkvihklgwtdmwrtlypdvpgytwwSNRgqayakdvgwridyqmvtpelaakavsahvykdekfsdhaplvveydyaae >4b5h_A:DNase_I-like; title=SUBSTATE BOUND INACTIVE MUTANT OF NEISSERIA AP ENDONUCLEASE IN PRESENCE OF METAL IONS organism=NEISSERIA MENINGITIDIS DNA sequence DG(U31):DC(V52) DC(U32):DG(V51) DT(U33):DA(V50) DA(U34):DT(V49) DC(U35):DG(V48) 3DR(U36):DG(V47) DC(U37):DG(V46) DT(U39):DA(V44) DC(U40):DG(V43) DG(U41):DC(V42) chainA ( 38) LYS38 0 0 2 0 0 0 0 0 0 0 (115) SER115 0 0 0 0 10 0 0 0 0 0 (161) ASN161 0 0 0 0 0 0 0 3 0 0 (168) ASN168 0 0 0 0 0 0 7 0 0 0 (207) ASN207 0 0 0 0 24 8 0 0 0 0 (208) ARG208 0 0 0 0 0 30 15 0 0 0 prot.sequence mlkiisanvngirsaykkgfyeyiaasgtdivcvqelKaqeadlsadmknphgmhghwhcaekrgysgvavyskrkpdnvqigmgieefdregrfvrcdfgrlsvislylpsgsSaeerqqvkyrfldafypmleamknegrdivvcgnwniahqnidlkNwkgnqkNsgflpeerewigkvihklgwtdmwrtlypdvpgytwwsNRgqayakdvgwridyqmvtpelaakavsahvykdekfsdhaplvveydyaae >4b5i_A:DNase_I-like; title=PRODUCT COMPLEX OF NEISSERIA AP ENDONUCLEASE IN PRESENCE OF METAL IONS organism=NEISSERIA MENINGITIDIS DNA sequence DC(X37):DG(V46) DA(X38):DT(V45) DT(X39):DA(V44) DC(X40):DG(V43) DG(X41):DC(V42) chainA (161) ASN161 0 0 1 0 0 (168) ASN168 1 0 0 0 0 (208) ARG208 36 0 0 0 0 prot.sequence mlkiisanvngirsaykkgfyeyiaasgadivcvqelkaqeadlsadmknphgmhghwhcaekrgysgvavyskrkpdnvqigmgieefdregrfvrcdfgrlsvislylpsgssaeerqqvkyrfldafypmleamknegrdivvcgdwniahqnidlkNwkgnqkNsgflpeerewigkvihklgwtdmwrtlypdvpgytwwsnRgqayakdvgwridyqmvtpelaakavsahvykdekfsdhaplvveydy >4b5j_A:DNase_I-like; title=NEISSERIA AP ENDONUCLEASE BOUND TO THE SUBSTRATE WITH AN ORPHAN ADENINE BASE organism=NEISSERIA MENINGITIDIS DNA sequence DC(V42):DG(U41) DG(V43):DC(U40) DA(V44):DT(U39) DT(V45):DA(U38) DG(V46):DC(U37) DA(V47):3DR(U36) DG(V48):DC(U35) DT(V49):DA(U34) DA(V50):DT(U33) DG(V51):DC(U32) DC(V52):DG(U31) chainA (115) SER115 0 0 0 0 0 0 5 0 0 0 0 (161) ASN161 0 0 1 0 0 0 0 0 0 0 0 (168) ASN168 0 0 0 0 16 0 0 0 0 0 0 (207) ASN207 0 0 0 0 0 0 5 0 0 0 0 (208) ARG208 0 0 0 0 54 37 0 0 0 0 0 prot.sequence mlkiisanvngirsaykkgfyeyiaasgadivcvqelkaqeadlsadmknphgmhghwhcaekrgysgvavyskrkpdnvqigmgieefdregrfvrcdfgrlsvislylpsgsSaeerqqvkyrfldafypmleamknegrdivvcgdwniahqnidlkNwkgnqkNsgflpeerewigkvihklgwtdmwrtlypdvpgytwwsNRgqayakdvgwridyqmvtpelaakavsahvykdekfsdhaplvveydy >4b5m_BC:DNase_I-like; title=NEISSERIA AP ENDONUCLEASE BOUND TO THE SUBSTRATE WITH A CYTOSINE ORPHAN BASE organism=NEISSERIA MENINGITIDIS DNA sequence DC(N37):DG(Z46) DA(N38):DT(Z45) DT(N39):DA(Z44) DC(N40):DG(Z43) DG(N41):DC(Z42) DC(X42):DG(M41) DG(X43):DC(M40) DA(X44):DT(M39) DT(X45):DA(M38) DG(X46):DC(M37) chainB (168) ASN168 0 0 0 0 0 0 0 0 0 5 (208) ARG208 0 0 0 0 0 0 0 0 0 22 chainC (168) ASN168 5 0 0 0 0 0 0 0 0 0 (208) ARG208 24 0 0 0 0 0 0 0 0 0 prot.sequence mlkiisanvngirsaykkgfyeyiaasgadivcvqelkaqeadlsadmknphgmhghwhcaekrgysgvavyskrkpdnvqigmgieefdregrfvrcdfgrlsvislylpsgssaeerqqvkyrfldafypmleamknegrdivvcgdwniahqnidlknwkgnqkNsgflpeerewigkvihklgwtdmwrtlypdvpgytwwsnRgqayakdvgwridyqmvtpelaakavsahvykdekfsdhaplvveydyaae/mlkiisanvngirsaykkgfyeyiaasgadivcvqelkaqeadlsadmknphgmhghwhcaekrgysgvavyskrkpdnvqigmgieefdregrfvrcdfgrlsvislylpsgssaeerqqvkyrfldafypmleamknegrdivvcgdwniahqnidlknwkgnqkNsgflpeerewigkvihklgwtdmwrtlypdvpgytwwsnRgqayakdvgwridyqmvtpelaakavsahvykdekfsdhaplvveydyaae >4b5m_C:DNase_I-like; title=NEISSERIA AP ENDONUCLEASE BOUND TO THE SUBSTRATE WITH A CYTOSINE ORPHAN BASE organism=NEISSERIA MENINGITIDIS DNA sequence DC(N37):DG(Z46) DA(N38):DT(Z45) DT(N39):DA(Z44) DC(N40):DG(Z43) DG(N41):DC(Z42) DC(X42):DG(M41) DG(X43):DC(M40) DA(X44):DT(M39) DT(X45):DA(M38) DG(X46):DC(M37) chainC (168) ASN168 5 0 0 0 0 0 0 0 0 0 (208) ARG208 24 0 0 0 0 0 0 0 0 0 prot.sequence mlkiisanvngirsaykkgfyeyiaasgadivcvqelkaqeadlsadmknphgmhghwhcaekrgysgvavyskrkpdnvqigmgieefdregrfvrcdfgrlsvislylpsgssaeerqqvkyrfldafypmleamknegrdivvcgdwniahqnidlknwkgnqkNsgflpeerewigkvihklgwtdmwrtlypdvpgytwwsnRgqayakdvgwridyqmvtpelaakavsahvykdekfsdhaplvveydyaae >4b9l_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF THE HIGH FIDELITY DNA POLYMERASE I WITH THE OXIDATIVE FORMAMIDOPYRIMIDINE-DA DNA LESION IN THE PRE-INSERTION SITE. organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DG(B1):DC(C14) DC(B2):DG(C13) DC(B3):DG(C12) DT(B4):DA(C11) DG(B5):DC(C10) DA(B6):DT(C9) DC(B7):DG(C8) DT(B8):DA(C7) DC(B9):DG(C6) DT(B10):DA(C5) chainA (286) LYS582 0 0 0 0 0 3 5 0 0 0 (291) TYR587 0 0 0 0 0 0 0 1 0 0 (319) ARG615 0 0 0 0 0 0 0 0 5 7 (329) ASN625 0 0 0 0 0 0 3 5 1 0 (418) TYR714 0 0 0 0 0 0 0 0 0 49 (501) GLN797 0 0 0 0 0 0 0 0 0 2 (533) HIS829 0 0 0 0 0 0 0 0 1 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkksktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4b9m_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF THE HIGH FIDELITY DNA POLYMERASE I WITH AN OXIDATIVE FORMAMIDOPYRIMIDINE-DA DNA LESION -THYMINE BASEPAIR IN THE POST- INSERTION SITE. organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DA(C5):DT(B28) DG(C6):DC(B27) DA(C7):DT(B26) DG(C8):DC(B25) DT(C9):DA(B24) DC(C10):DG(B23) DA(C11):DT(B22) DG(C12):DC(B21) DG(C13):DC(B20) DC(C14):DG(B19) chainA (286) LYS582 0 0 5 2 0 0 0 0 0 0 (291) TYR587 0 1 0 0 0 0 0 0 0 0 (326) ASN622 0 1 0 0 0 0 0 0 0 0 (329) ASN625 1 7 2 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkksktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgrlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4b9n_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF THE HIGH FIDELITY DNA POLYMERASE I CORRECTLY BYPASSING THE OXIDATIVE FORMAMIDOPYRIMIDINE-DA DNA LESION. organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DA(C2):DT(B12) DA(C3):DT(B11) DA(C5):DT(B10) DG(C6):DC(B9) DA(C7):DT(B8) DG(C8):DC(B7) DT(C9):DA(B6) DC(C10):DG(B5) DA(C11):DT(B4) chainA (287) LYS582 0 0 6 2 0 0 0 0 0 (292) TYR587 0 1 0 0 0 0 0 0 0 (330) ASN625 2 4 2 0 0 0 0 0 0 (415) PHE710 5 0 0 0 0 0 0 0 0 (419) TYR714 11 0 0 0 0 0 0 0 0 (421) ILE716 1 0 0 0 0 0 0 0 0 prot.sequence takmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkksktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgrlsstepnlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4b9s_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF THE HIGH FIDELITY DNA POLYMERASE I WITH AN OXIDATIVE FORMAMIDOPYRIMIDINE-DG DNA LESION OUTSIDE OF THE PRE-INSERTION SITE. organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DA(C5):DT(B11) DG(C6):DC(B10) DA(C7):DT(B9) DG(C8):DC(B8) DT(C9):DA(B7) DC(C10):DG(B6) DA(C11):DT(B5) DG(C12):DC(B4) DG(C13):DC(B3) DT(C14):DA(B2) chainA (285) LYS582 0 0 0 7 3 0 0 0 0 0 (318) ARG615 6 1 0 0 0 0 0 0 0 0 (328) ASN625 0 1 5 3 0 0 0 0 0 0 (413) PHE710 6 0 0 0 0 0 0 0 0 0 (417) TYR714 37 0 0 0 0 0 0 0 0 0 (419) ILE716 1 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkksktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4b9v_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF THE HIGH FIDELITY DNA POLYMERASE I WITH EXTENDING FROM AN OXIDATIVE FORMAMIDOPYRIMIDINE-DG DNA LESION -DA BASEPAIR. organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(C4):DA(B11) FOX(C5):DA(B10) DA(C6):DT(B9) DG(C7):DC(B8) DA(C8):DT(B7) DG(C9):DC(B6) DT(C10):DA(B5) DC(C11):DG(B4) DA(C12):DT(B3) DG(C13):DC(B2) DG(C14):DC(B1) chainA (285) LYS582 0 0 0 5 2 0 0 0 0 0 0 (318) ARG615 1 0 0 0 0 0 0 0 0 0 0 (328) ASN625 0 1 4 3 0 0 0 0 0 0 0 (413) PHE710 10 0 0 0 0 0 0 0 0 0 0 (417) TYR714 27 0 0 0 0 0 0 0 0 0 0 (419) ILE716 1 0 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkksktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4bac_A:Ribonuclease_H-like; title=PROTOTYPE FOAMY VIRUS STRAND TRANSFER COMPLEXES ON PRODUCT DNA organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DA(D2):DT(C18) DC(D3):DG(C17) DA(D4):DT(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (211) SER218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 7 12 9 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQsgSkveRknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >4bbs_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURE OF AN INITIALLY TRANSCRIBING RNA POLYMERASE II-TFIIB COMPLEX organism=? DNA sequence DG(T10):DC(N7) DT(T11):DA(N6) DT(T12):DA(N5) DG(T13):DC(N4) DT(T14):DA(N3) DG(T15):DC(N2) DC(T16):DG(N1) chainA (1350) ARG1386 0 0 0 0 0 6 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvraeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >4bbs_AB:Cyclin-like;Zinc_beta-ribbon; title=STRUCTURE OF AN INITIALLY TRANSCRIBING RNA POLYMERASE II-TFIIB COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(N1):DC(T16) DC(N2):DG(T15) DA(N3):DT(T14) DC(N4):DG(T13) DA(N5):DT(T12) DA(N6):DT(T11) DC(N7):DG(T10) chainA (1350) ARG1386 0 6 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvraeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhttesdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidelkyelgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveeahdfnmklainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >4bdp_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 11 BASE PAIRS OF DUPLEX DNA AFTER ADDITION OF TWO DATP RESIDUES organism=Geobacillus stearothermophilus DNA sequence DT(T4):DA(P29) DT(T5):DA(P28) DG(T6):DC(P27) DC(T7):DG(P26) DA(T8):DT(P25) DT(T9):DA(P24) DG(T10):DC(P23) DA(T11):DT(P22) DT(T12):DA(P21) DG(T13):DC(P20) DC(T14):DG(P19) chainA (286) LYS582 0 0 0 6 3 0 0 0 0 0 0 (319) ARG615 7 2 0 0 0 0 0 0 0 0 0 (326) ASN622 0 0 1 0 0 0 0 0 0 0 0 (329) ASN625 0 1 7 2 0 0 0 0 0 0 0 (333) ARG629 4 4 0 0 0 0 0 0 0 0 0 (418) TYR714 49 0 0 0 0 0 0 0 0 0 0 (501) GLN797 3 0 0 0 0 0 0 0 0 0 0 prot.sequence aamaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvraaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4bdy_A:Ribonuclease_H-like; title=PFV INTASOME WITH INHIBITOR XZ-89 organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 12 11 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >4bdz_A:Ribonuclease_H-like; title=PFV INTASOME WITH INHIBITOR XZ-90 organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 11 12 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >4be0_A:Ribonuclease_H-like; title=PFV INTASOME WITH INHIBITOR XZ-115 organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 14 10 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >4be1_A:Ribonuclease_H-like; title=PFV INTASOME WITH INHIBITOR XZ-116 organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 10 12 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >4be2_A:Ribonuclease_H-like; title=PFV INTASOME WITH INHIBITOR XZ-259 organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 10 13 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >4bhk_A:EF-hand; title=CRYSTAL STRUCTURE OF MOSS LEAFY BOUND TO DNA organism=PHYSCOMITRELLA PATENS DNA sequence DG(W1):DC(X29) DC(W2):DG(X28) DC(W3):DG(X27) DA(W4):DT(X26) DC(W5):DG(X25) DG(W6):DC(X24) DG(W7):DC(X23) DG(W8):DC(X22) DC(W9):DG(X21) DG(W10):DC(X20) DA(W11):DT(X19) DC(W12):DG(X18) DC(W13):DG(X17) DA(W14):DT(X16) DG(W15):DC(X15) DC(W16):DG(X14) DG(W17):DC(X13) DG(W18):DC(X12) DA(W19):DT(X11) DC(W20):DG(X10) DG(W21):DC(X9) DG(W22):DC(X8) DT(W23):DA(X7) DG(W24):DC(X6) DA(W25):DT(X5) DG(W26):DC(X4) DC(W27):DG(X3) DA(W28):DT(X2) DC(W29):DG(X1) chainA ( 2) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 6 1 0 0 0 0 ( 56) ASN244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 72) LYS260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 1 0 0 0 0 0 0 0 0 0 0 ( 73) PRO261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 7 0 0 0 0 0 0 0 0 ( 74) LYS262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 76) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 14 0 0 0 0 0 0 0 0 0 0 ( 77) ASP265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 prot.sequence pRehpfivtepgepakgkkngldylfdlyeqcgkfleevqhiakekgekcpskvtNevfrhakltgagyiNKPKmRDyvhcyalhcldvetsnnlrkeykergenvgawcqacyfplvklarqnewdiddlfnrndklriwyvptklrqlchiermkh >4bhk_AB:EF-hand; title=CRYSTAL STRUCTURE OF MOSS LEAFY BOUND TO DNA organism=PHYSCOMITRELLA PATENS DNA sequence DG(W1):DC(X29) DC(W2):DG(X28) DC(W3):DG(X27) DA(W4):DT(X26) DC(W5):DG(X25) DG(W6):DC(X24) DG(W7):DC(X23) DG(W8):DC(X22) DC(W9):DG(X21) DG(W10):DC(X20) DA(W11):DT(X19) DC(W12):DG(X18) DC(W13):DG(X17) DA(W14):DT(X16) DG(W15):DC(X15) DC(W16):DG(X14) DG(W17):DC(X13) DG(W18):DC(X12) DA(W19):DT(X11) DC(W20):DG(X10) DG(W21):DC(X9) DG(W22):DC(X8) DT(W23):DA(X7) DG(W24):DC(X6) DA(W25):DT(X5) DG(W26):DC(X4) DC(W27):DG(X3) DA(W28):DT(X2) DC(W29):DG(X1) chainA ( 2) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 6 1 0 0 0 0 ( 56) ASN244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 72) LYS260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 1 0 0 0 0 0 0 0 0 0 0 ( 73) PRO261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 7 0 0 0 0 0 0 0 0 ( 74) LYS262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 76) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 14 0 0 0 0 0 0 0 0 0 0 ( 77) ASP265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 chainB ( 2) ARG190 0 0 0 0 0 8 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN244 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN259 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LYS260 0 0 0 0 0 0 0 0 0 0 2 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) PRO261 0 0 0 0 0 0 0 0 11 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LYS262 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG264 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASP265 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pRehpfivtepgepakgkkngldylfdlyeqcgkfleevqhiakekgekcpskvtNevfrhakltgagyiNKPKmRDyvhcyalhcldvetsnnlrkeykergenvgawcqacyfplvklarqnewdiddlfnrndklriwyvptklrqlchiermkh/pRehpfivtepgepakgkkngldylfdlyeqcgkfleevqhiakekgekcpskvtNevfrhakltgagyiNKPKmRDyvhcyalhcldvetsnnlrkeykergenvgawcqacyfplvklarqnewdiddlfnrndklriwyvptklrqlchiermkh >4bhm_EF:ssDNA-binding_transcriptional_regulator_domain; title=THE CRYSTAL STRUCTURE OF MOSUB1-DNA COMPLEX REVEALS A NOVEL DNA BINDING MODE organism=MAGNAPORTHE ORYZAE DNA sequence DT(H1) DT(H2) DT(H3) DT(H4) DT(H5) DT(H6) DT(H7) DT(H8) chainE chainF ( 22) SER60 0 0 0 0 0 4 6 0 ( 24) PHE62 0 0 0 0 0 0 35 0 ( 25) LYS63 0 0 0 0 0 0 0 4 ( 27) MET65 0 0 0 0 0 0 0 6 ( 29) PHE67 0 0 0 0 0 0 3 5 ( 31) ASN69 0 0 0 0 0 13 1 0 ( 33) ARG71 0 0 0 0 0 3 0 0 ( 35) TYR73 0 0 0 0 0 6 0 0 ( 36) TYR74 0 0 0 0 44 0 0 0 ( 44) PRO82 0 0 0 0 0 11 0 0 ( 46) LYS84 0 0 0 0 1 0 0 0 ( 52) THR90 0 0 0 0 0 0 0 1 prot.sequence qvdaegnpfweisdkrrvgisqfkkmdfinireyyeaemkpgkkgigltvdqytaflkaipainaelrsrghdit/sqvdaegnpfweisdkrrvgiSqFKkMdFiNiReYYeaggemkPgKkgiglTvdqytaflkaipainaelrsrghdit >4bhm_F:ssDNA-binding_transcriptional_regulator_domain; title=THE CRYSTAL STRUCTURE OF MOSUB1-DNA COMPLEX REVEALS A NOVEL DNA BINDING MODE organism=MAGNAPORTHE ORYZAE DNA sequence DT(H1) DT(H2) DT(H3) DT(H4) DT(H5) DT(H6) DT(H7) DT(H8) chainF ( 22) SER60 0 0 0 0 0 4 6 0 ( 24) PHE62 0 0 0 0 0 0 35 0 ( 25) LYS63 0 0 0 0 0 0 0 4 ( 27) MET65 0 0 0 0 0 0 0 6 ( 29) PHE67 0 0 0 0 0 0 3 5 ( 31) ASN69 0 0 0 0 0 13 1 0 ( 33) ARG71 0 0 0 0 0 3 0 0 ( 35) TYR73 0 0 0 0 0 6 0 0 ( 36) TYR74 0 0 0 0 44 0 0 0 ( 44) PRO82 0 0 0 0 0 11 0 0 ( 46) LYS84 0 0 0 0 1 0 0 0 ( 52) THR90 0 0 0 0 0 0 0 1 prot.sequence sqvdaegnpfweisdkrrvgiSqFKkMdFiNiReYYeaggemkPgKkgiglTvdqytaflkaipainaelrsrghdit >4bnc_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF HUMAN ETV1 COMPLEXED WITH DNA organism=HOMO SAPIENS DNA sequence DC(C11):DG(B10) DA(C12):DT(B9) DC(C13):DG(B8) DT(C14):DA(B7) DT(C15):DA(B6) DC(C16):DG(B5) DC(C17):DG(B4) DG(C18):DC(B3) DG(C19):DC(B2) DT(C20):DA(B1) chainA ( 54) ASP387 0 0 0 0 0 1 3 1 0 0 ( 55) LYS388 0 0 0 0 3 0 0 0 0 0 ( 58) ARG391 0 0 0 1 8 14 20 0 0 0 ( 59) SER392 0 0 0 2 0 0 0 0 0 0 ( 61) ARG394 0 0 0 0 0 0 9 14 0 0 ( 62) TYR395 0 0 6 9 6 0 0 0 0 0 prot.sequence slqlwqflvallddpsnshfiawtgrgmefkliepeevarrwgiqknrpamnyDKlsRSlRYyyekgimqkvageryvykfvcdpealfsmafsd >4boc_A:DNA/RNA_polymerases; title=STRUCTURE OF MITOCHONDRIAL RNA POLYMERASE ELONGATION COMPLEX organism=HOMO SAPIENS DNA sequence DC(T-9):DG(N0) DG(T-8):DC(N-1) DT(T-7):DA(N-2) DC(T-6):DG(N-3) DT(T-5):DA(N-4) DG(T-4):DC(N-5) DG(T-3):DC(N-6) DC(T-2):DG(N-7) DG(T-1):DC(N-8) DT(T0):DA(N-9) DG(T1):DG(N-10) DC(T2):DC(N-11) DG(T3):DA(N-18) DC(T4):DA(N-19) DG(T5):DT(N-20) DC(T6):DG(N-21) DC(T7):DG(N-22) DG(T8):DG(N-23) DC(T9):DG(N-24) DT(T10):DT(N-25) DA(T11):DA(N-26) chainA (276) GLN493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 2 0 0 (391) SER611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (393) ARG613 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (400) ILE620 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 (554) SER774 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 (558) GLU778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (772) GLN992 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (776) THR996 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 (779) TYR999 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (781) VAL1001 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (784) TYR1004 0 0 0 0 0 0 0 0 0 108 0 0 0 0 0 0 0 0 0 0 0 (789) GLN1009 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (806) TRP1026 0 0 0 0 0 0 0 0 0 0 44 0 0 0 0 0 0 0 0 0 0 (807) GLU1027 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (872) ARG1113 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qlsgqqqrllaffkcclltdqlplahhllvvhhgqrqkrklltldmynavmlgwarqgafkelvyvlfmvkdagltpdllsyaaalqcmgrqdqdagtiercleqmsqeglklqalftavllseedratvlkavhkvkptfslppqlpppvntskllrdvyakdgrvsypklhlplktlqclfekqlhmelasrvcvvsvekptlpskevkharktlktlrdqwekalcralretknrlerevyegrfslypflcllderevvrmllqvlqalpaQgesfttlarelsartfsrhvvqrqrvsgqvqalqnhyrkylcllasdaevpepclprqyweelgapealreqpwplpvqmelgkllaemlvqatqmpcsldrssrlvpvlyhvySfRnvqqigIlkphpayvqllekaaeptltfeavdvpmlcpplpwtsphsgafllsptklmrtvegatqhqelletcpptalhgaldaltqlgncawrvngrvldlvlqlfqakgcpqlgvpappseapqppeahlphsaaparkaelrrelahcqkvaremhSlraEalyrlslaqhlrdrvfwlphnmdfrgrtypcpphfnhlgsdvarallefaqgrplgphgldwlkihlvnltglkkreplrkrlafaeevmddildsadqpltgrkwwmgaeepwqtlaccmevanavrasdpaayvshlpvhqdgscnglqhyaalgrdsvgaasvnlepsdvpqdvysgvaaqvevfrrqdaqrgmrvaqvlegfitrkvvkQtvmTvvYgVtrYggrlQiekrlrelsdfpqefvWEashylvrqvfkslqemfsgtraiqhwltesarlishmgsvvewvtplgvpviqpyrldsrkpntRkqkngfppnfihsldsshmmltalhcyrkgltfvsvhdcywthaadvsvmnqvcreqfvrlhsepilqdlsrflvkrfcsepqkileasqlketlqavpkpgafdleqvkrstyffs >4bqa_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ETS DOMAIN OF HUMAN ETS2 IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DA(E1):DT(F10) DC(E2):DG(F9) DC(E3):DG(F8) DG(E4):DC(F7) DG(E5):DC(F6) DA(E6):DT(F5) DA(E7):DT(F4) DG(E8):DC(F3) DT(E9):DA(F2) DG(E10):DC(F1) DC(I1):DG(H10) DA(I2):DT(H9) DC(I3):DG(H8) DT(I4):DA(H7) DT(I5):DA(H6) DC(I6):DG(H5) DC(I7):DG(H4) DG(I8):DC(H3) DG(I9):DC(H2) DT(I10):DA(H1) DA(B1):DT(C10) DC(B2):DG(C9) DC(B3):DG(C8) DG(B4):DC(C7) DG(B5):DC(C6) DA(B6):DT(C5) DA(B7):DT(C4) DG(B8):DC(C3) DT(B9):DA(C2) DG(B10):DC(C1) chainA ( 88) LYS416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 91) ARG419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 19 10 1 0 0 0 ( 94) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 14 0 0 0 0 0 0 ( 95) TYR423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 6 0 0 prot.sequence msfkdyiqersdpveqgkpvipaavlagftgsgpiqlwqfllellsdkscqsfiswtgdgwefkladpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktsgkryvyrfvcdlqnllgftpeelhai >4bqa_ADG:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ETS DOMAIN OF HUMAN ETS2 IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DA(E1):DT(F10) DC(E2):DG(F9) DC(E3):DG(F8) DG(E4):DC(F7) DG(E5):DC(F6) DA(E6):DT(F5) DA(E7):DT(F4) DG(E8):DC(F3) DT(E9):DA(F2) DG(E10):DC(F1) DC(I1):DG(H10) DA(I2):DT(H9) DC(I3):DG(H8) DT(I4):DA(H7) DT(I5):DA(H6) DC(I6):DG(H5) DC(I7):DG(H4) DG(I8):DC(H3) DG(I9):DC(H2) DT(I10):DA(H1) DA(B1):DT(C10) DC(B2):DG(C9) DC(B3):DG(C8) DG(B4):DC(C7) DG(B5):DC(C6) DA(B6):DT(C5) DA(B7):DT(C4) DG(B8):DC(C3) DT(B9):DA(C2) DG(B10):DC(C1) chainA ( 88) LYS416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 91) ARG419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 19 10 1 0 0 0 ( 94) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 14 0 0 0 0 0 0 ( 95) TYR423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 6 0 0 chainD ( 56) LYS416 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG419 0 0 0 24 19 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG422 0 0 12 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR423 0 0 0 0 0 6 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 56) LYS416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 19 24 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 13 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR423 0 0 0 0 0 0 0 0 0 0 0 0 9 9 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence msfkdyiqersdpveqgkpvipaavlagftgsgpiqlwqfllellsdkscqsfiswtgdgwefkladpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktsgkryvyrfvcdlqnllgftpeelhai/gpiqlwqfllellsdkscqsfiswtgdgwefkladpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktsgkryvyrfvc/gpiqlwqfllellsdkscqsfiswtgdgwefkladpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktsgkryvyrfvcd >4bul_AC:Type_II_DNA_topoisomerase; title=NOVEL HYDROXYL TRICYCLICS (E.G. GSK966587) AS POTENT INHIBITORS OF BACTERIAL TYPE IIA TOPOISOMERASES organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(F1):DT(E20) DG(F2):DC(E19) DC(F3):DG(E18) DC(F4):DG(E17) DG(F5):DC(E16) DT(F6):DA(E15) DA(F7):DT(E14) DG(F8):DC(E13) DG(F9):DC(E12) DT(F10):DA(E11) DA(F11):DT(E10) DC(F12):DG(E9) DA(F13):DT(E8) DC(F14):DG(E7) DC(F15):DG(E6) DG(F16):DC(E5) DC(F17):DG(E4) DA(F18):DT(E3) DC(F19):DG(E2) chainA ( 42) ARG458 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 (209) TYR1025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (269) SER1085 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (359) ILE1175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 22 0 0 chainC ( 45) LYS460 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 (267) SER1085 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (274) ARG1092 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) ARG1122 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (357) ILE1175 0 0 0 24 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyarinernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/gkladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyeamvRmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >4bul_C:Type_II_DNA_topoisomerase; title=NOVEL HYDROXYL TRICYCLICS (E.G. GSK966587) AS POTENT INHIBITORS OF BACTERIAL TYPE IIA TOPOISOMERASES organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(E2):DC(F19) DT(E3):DA(F18) DG(E4):DC(F17) DC(E5):DG(F16) DG(E6):DC(F15) DG(E7):DC(F14) DT(E8):DA(F13) DG(E9):DC(F12) DT(E10):DA(F11) DA(E11):DT(F10) DC(E12):DG(F9) DC(E13):DG(F8) DT(E14):DA(F7) DA(E15):DT(F6) DC(E16):DG(F5) DG(E17):DC(F4) DG(E18):DC(F3) DC(E19):DG(F2) DT(E20):DA(F1) chainC ( 45) LYS460 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 (267) SER1085 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (274) ARG1092 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (304) ARG1122 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (357) ILE1175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 24 0 0 0 prot.sequence gkladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyeamvRmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >4bwj_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KLENTAQ MUTANT IN COMPLEX WITH DNA AND DDCTP organism=THERMUS AQUATICUS DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) DOC(B112):DG(C205) DCT(A1833):DG(C204) chainA (247) LYS540 0 0 0 0 0 0 0 4 5 0 0 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 0 3 8 0 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 0 (290) ASN583 0 0 0 0 0 0 0 0 2 10 1 0 0 (317) ASP610 0 0 0 0 0 0 0 0 0 0 0 0 7 (319) SER612 0 0 0 0 0 0 0 0 0 0 0 0 2 (320) GLN613 0 0 0 0 0 0 0 0 0 0 0 0 2 (321) ILE614 0 0 0 0 0 0 0 0 0 0 0 0 2 (322) GLU615 0 0 0 0 0 0 0 0 0 0 0 0 1 (346) HIS639 0 0 0 0 0 0 0 0 0 0 0 0 7 (366) ARG659 0 0 0 0 0 0 0 0 0 0 0 0 8 (370) LYS663 0 0 0 0 0 0 0 0 0 0 0 0 13 (371) THR664 0 0 0 0 0 0 0 0 0 0 0 0 7 (374) PHE667 0 0 0 0 0 0 0 0 0 0 0 0 24 (378) TYR671 0 0 0 0 0 0 0 0 0 0 0 0 7 (380) MET673 0 0 0 0 0 0 0 0 0 0 0 0 2 (384) ARG677 0 0 0 0 0 0 0 0 0 0 0 0 3 (457) ASN750 0 0 0 0 0 0 0 0 0 0 0 0 1 (461) GLN754 0 0 0 0 0 0 0 0 0 0 0 4 0 (491) HIS784 0 0 0 0 0 0 0 0 0 0 2 0 0 (492) ASP785 0 0 0 0 0 0 0 0 0 0 0 0 6 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylramslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstraavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdfhtetaswmfgvpreavdplmrraakTinFgvlYgMsahRlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaerkafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4bwm_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KLENTAQ MUTANT IN COMPLEX WITH A RNA/DNA HYBRID organism=THERMUS AQUATICUS DNA sequence DC(B103) DC(B104) DA(B105) DC(B106) DG(B107) DG(B108) DC(B109) DG(B110) DC(B111) chainA (288) GLN582 0 0 0 0 0 0 0 0 5 (289) ASN583 0 0 0 0 0 0 0 5 3 prot.sequence eeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylramslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstraavlealreahpivekilqyreltklkstyidplpdlihprtgrlhtrfnqtatatgrlsssdpnlQNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdfhtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaerkafnmpvqgtaadlmklamvklfprleemgarmllqvhdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4bxx_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ARRESTED RNA POLYMERASE II-BYE1 COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N1):DT(T17) DG(N2):DC(T16) DG(N3):DC(T15) DT(N4):DA(T14) DA(N5):DT(T13) DA(N6):DT(T12) DG(N7):DC(T11) DC(N8):DG(T10) DT(N9):DA(T9) chainA (1360) ARG1386 0 1 8 0 0 0 0 0 0 (1361) HIS1387 0 0 0 2 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpkaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRHgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >4bxx_AB: title=ARRESTED RNA POLYMERASE II-BYE1 COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N1):DT(T17) DG(N2):DC(T16) DG(N3):DC(T15) DT(N4):DA(T14) DA(N5):DT(T13) DA(N6):DT(T12) DG(N7):DC(T11) DC(N8):DG(T10) DT(N9):DA(T9) chainA (1360) ARG1386 0 1 8 0 0 0 0 0 0 (1361) HIS1387 0 0 0 2 0 0 0 0 0 chainB prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpkaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRHgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgagvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >4by7_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ELONGATING RNA POLYMERASE II-BYE1 TLD COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N3):DA(T14) DA(N4):DT(T13) DA(N5):DT(T12) DG(N6):DC(T11) DT(N7):DA(T10) DA(N8):DT(T9) DC(N9):DG(T8) DT(N10):DA(T7) DT(N11):DA(T6) DG(N12):DC(T5) DA(N13):DT(T4) DG(N14):DC(T3) DC(N15):DG(T2) chainA (1357) ARG1386 0 2 2 0 0 0 0 0 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlnvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvraeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >4c2t_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF FULL LENGTH DEINOCOCCUS RADIODURANS UVRD IN COMPLEX WITH DNA organism=DEINOCOCCUS RADIODURANS DNA sequence DC(M2):DG(N20) DA(M3):DT(N19) DG(M4):DC(N18) DT(M5):DA(N17) DG(M6):DC(N16) DC(M7):DG(N15) DT(M8):DA(N14) DC(M9):DG(N13) DG(M10):DC(N12) DC(M11):DG(N11) DA(M12):DT(N10) DG(M13):DC(N9) DG(M14):DC(N8) DT(M15):DA(N7) DC(M16):DG(N6) DG(M17):DC(N5) DT(M18):DA(N4) DA(M19):DT(N3) DC(M20):DG(N2) DC(M21):DG(N1) chainA (455) ARG459 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (621) PHE633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 prot.sequence agpdllqalnptqaqaadhftgpalviagagsgktrtliyriahlighygvhpgeilavtftnkaaaemreraghlvpgagdlwmstfhsagvrilrtygehiglrrgfviyddddqldiikevmgsipgigaetqprvirgiidraksnlwtpddldrsrepfisglprdaaaeayrryevrkkgqnaidfgdlitetvrlfkevpgvldkvqnkakfihvdeyqdtnraqyeltrllasrdrnllvvgdpdqsiykfrgadiqnildfqkdypdakvymlehnyrssarvleaankliennterldktlkpvkeagqpvtfhratdhraegdyvadwltrlhgegrawsemailyrtnaqsrvieeslrrvqiparivggvgfydrreirdilayarlalnpaddvalrriigrprrgigdtalqklmewarthhtsvltacanaaeqnildRgahkatefaglmeamseaadnyepaaflrfvmetsgyldllrqegqegqvrlenleelvsaaeewsqdeanvggsiadflddaallssdmrtkaedavtlmtlhnakglefpvvfivgveqgllpskgaiaegpsgieeerrlfyvgitramerllmtaaqnrmqFgktnaaedsafledieglfdtvdpygqpi >4c2t_AB:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF FULL LENGTH DEINOCOCCUS RADIODURANS UVRD IN COMPLEX WITH DNA organism=DEINOCOCCUS RADIODURANS DNA sequence DC(M2):DG(N20) DA(M3):DT(N19) DG(M4):DC(N18) DT(M5):DA(N17) DG(M6):DC(N16) DC(M7):DG(N15) DT(M8):DA(N14) DC(M9):DG(N13) DG(M10):DC(N12) DC(M11):DG(N11) DA(M12):DT(N10) DG(M13):DC(N9) DG(M14):DC(N8) DT(M15):DA(N7) DC(M16):DG(N6) DG(M17):DC(N5) DT(M18):DA(N4) DA(M19):DT(N3) DC(M20):DG(N2) DC(M21):DG(N1) chainA (455) ARG459 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (621) PHE633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 chainB (616) PHE633 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence agpdllqalnptqaqaadhftgpalviagagsgktrtliyriahlighygvhpgeilavtftnkaaaemreraghlvpgagdlwmstfhsagvrilrtygehiglrrgfviyddddqldiikevmgsipgigaetqprvirgiidraksnlwtpddldrsrepfisglprdaaaeayrryevrkkgqnaidfgdlitetvrlfkevpgvldkvqnkakfihvdeyqdtnraqyeltrllasrdrnllvvgdpdqsiykfrgadiqnildfqkdypdakvymlehnyrssarvleaankliennterldktlkpvkeagqpvtfhratdhraegdyvadwltrlhgegrawsemailyrtnaqsrvieeslrrvqiparivggvgfydrreirdilayarlalnpaddvalrriigrprrgigdtalqklmewarthhtsvltacanaaeqnildRgahkatefaglmeamseaadnyepaaflrfvmetsgyldllrqegqegqvrlenleelvsaaeewsqdeanvggsiadflddaallssdmrtkaedavtlmtlhnakglefpvvfivgveqgllpskgaiaegpsgieeerrlfyvgitramerllmtaaqnrmqFgktnaaedsafledieglfdtvdpygqpi/agpdllqalnptqaqaadhftgpalviagagsgktrtliyriahlighygvhpgeilavtftnkaaaemreraghlvpgagdlwmstfhsagvrilrtygehiglrrgfviyddddqldiikevmgsipgigaetqprvirgiidraksnlwtpddldrsrepfisglprdaaaeayrryevrkkgqnaidfgdlitetvrlfkevpgvldkvqnkakfihvdeyqdtnraqyeltrllasrdrnllvvgdpdqsiykfrgadiqnildfqkdypdakvymlehnyrssarvleaankliennterldktlkpvkeagqpvtfhratdhraegdyvadwltrlhgegrawsemailyrtnaqsrvieeslrrvqiparivggvgfydrreirdilayarlalnpaddvalrriigrprrgigdtalqklmewarthhtsvltacanaaeqnilgahkatefaglmeamseaadnyepaaflrfvmetsgyldllrqegqegqvrlenleelvsaaeewsqdeanvggsiadflddaallssdmredavtlmtlhnakglefpvvfivgveqgllpskgaiaegpsgieeerrlfyvgitramerllmtaaqnrmqFgktnaaedsafledieglfdtvdpygqpi >4c2t_CD:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF FULL LENGTH DEINOCOCCUS RADIODURANS UVRD IN COMPLEX WITH DNA organism=DEINOCOCCUS RADIODURANS DNA sequence DG(P1):DC(O21) DC(P2):DG(O20) DA(P3):DT(O19) DG(P4):DC(O18) DT(P5):DA(O17) DG(P6):DC(O16) DC(P7):DG(O15) DT(P8):DA(O14) DC(P9):DG(O13) DG(P10):DC(O12) DC(P11):DG(O11) DA(P12):DT(O10) DG(P13):DC(O9) DG(P14):DC(O8) DT(P15):DA(O7) DC(P16):DG(O6) DG(P17):DC(O5) DT(P18):DA(O4) DA(P19):DT(O3) DC(P20):DG(O2) DC(P21):DG(O1) chainC (420) ARG422 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (622) PHE633 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (617) PHE633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 prot.sequence tssagpdllqalnptqaqaadhftgpalviagagsgktrtliyriahlighygvhpgeilavtftnkaaaemreraghlvpgagdlwmstfhsagvrilrtygehiglrrgfviyddddqldiikevmgsipgigaetqprvirgiidraksnlwtpddldrsrepfisglprdaaaeayrryevrkkgqnaidfgdlitetvrlfkevpgvldkvqnkakfihvdeyqdtnraqyeltrllasrdrnllvvgdpdqsiykfrgadiqnildfqkdypdakvymlehnyrssarvleaankliennterldktlkpvkeagqpvtfhratdhraegdyvadwltrlhgegrawsemailyrtnaqsrvieeslrrvqiprivggvgfydrreirdilayarlalnpaddvalrriigrpRrgigdtalqklmewarthhtsvltacanaaeqnildrgahkatefaglmeamseaadnyepaaflrfvmetsgyldllrqeegqvrlenleelvsaaeewsqdeansiadflddaallssvddmrtkaepedavtlmtlhnakglefpvvfivgveqgllpskgaiaegpsgieeerrlfyvgitramerllmtaaqnrmqFgktnaaedsafledieglfdtvdpygqpi/sagpdllqalnptqaqaadhftgpalviagagsgktrtliyriahlighygvhpgeilavtftnkaaaemreraghlvpagdlwmstfhsagvrilrtygehiglrrgfviyddddqldiikevmgsipgigaetqprvirgiidraksnlwtpddldrsrepfisglprdaaaeayrryevrkkgqnaidfgdlitetvrlfkevpgvldkvqnkakfihvdeyqdtnraqyeltrllasrdrnllvvgdpdqsiykfrgadiqnildfqkdypdakvymlehnyrssarvleaankliennterldktlkpvkeagqpvtfhratdhraegdyvadwltrlhgegrawsemailyrtnaqsrvieeslrrvqiprivggvgfydrreirdilayarlalnpaddvalrriigrprrgigdtalqklmewarthhtsvltacanaaeqnildrgahkatefaglmeamseaadnyepaaflrfvmetsgyldllrqegqegqvrlenleelvsaaeewsqdeanvsiadflddaallssdmrtaedavtlmtlhnakglefpvvfivgveqgllpskgaiaegpsgieeerrlfyvgitramerllmtaaqnrmqFgktnaaedsafledieglfdtvdpygqp >4c2u_AD:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DEINOCOCCUS RADIODURANS UVRD IN COMPLEX WITH DNA, FORM 1 organism=DEINOCOCCUS RADIODURANS DNA sequence DC(Y2):DG(X17) DA(Y3):DT(X16) DG(Y4):DC(X15) DT(Y5):DA(X14) DG(Y6):DC(X13) DC(Y7):DG(X12) DT(Y8):DA(X11) DC(Y9):DG(X10) DG(Y10):DC(X9) DC(Y11):DG(X8) DA(Y12):DT(X7) DG(Y13):DC(X6) DG(Y14):DC(X5) DT(Y15):DA(X4) DC(Y16):DG(X3) DG(Y17):DC(X2) DT(Y18):DA(X1) chainA (453) ARG459 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chainD (453) ARG459 0 0 0 0 1 11 3 0 0 0 0 0 0 0 0 0 0 prot.sequence sagpdllqalnptqaqaadhftgpalviagagsgktrtliyriahlighygvhpgeilavtftnkaaaemreraghlvpgagdlwmstfhsagvrilrtygehiglrrgfviyddddqldiikevmgsipgetqprvirgiidraksnlwtpddldrsrepfisglprdaaaeayrryevrkkgqnaidfgdlitetvrlfkevpgvldkvqnkakfihvdeyqdtnraqyeltrllasrdrnllvvgdpdqsiykfrgadiqnildfqkdypdakvymlehnyrssarvleaankliennterldktlkpvkeagqpvtfhratdhraegdyvadwltrlhgegrawsemailyrtnaqsrvieeslrrvqiparivggvgfydrreirdilayarlalnpaddvalrriigrprrgigdtalqklmewarthhtsvltacanaaeqnildRgahkatefaglmeamseaadnyepaaflrfvmetsgyldllrqegqegqvrlenleelvsaaeewsqdeanvggsiadflddaallssvddmrtkaenkgapedavtlmtlhnakglefpvvfivgveqgllpskgaiaegpsgieeerrlfyvgitramerllmtaaqnrmqfgktnaaedsafledieglfdtvdpygqpiey/sagpdllqalnptqaqaadhftgpalviagagsgktrtliyriahlighygvhpgeilavtftnkaaaemreraghlvpgagdlwmstfhsagvrilrtygehiglrrgfviyddddqldiikevmgsipgetqprvirgiidraksnlwtpddldrsrepfisglprdaaaeayrryevrkkgqnaidfgdlitetvrlfkevpgvldkvqnkakfihvdeyqdtnraqyeltrllasrdrnllvvgdpdqsiykfrgadiqnildfqkdypdakvymlehnyrssarvleaankliennterldktlkpvkeagqpvtfhratdhraegdyvadwltrlhgegrawsemailyrtnaqsrvieeslrrvqiparivggvgfydrreirdilayarlalnpaddvalrriigrprrgigdtalqklmewarthhtsvltacanaaeqnildRgahkatefaglmeamseaadnyepaaflrfvmetsgyldllrqegqegqvrlenleelvsaaeewsqdeanvggsiadflddaallssvddmrtkaenkgapedavtlmtlhnakglefpvvfivgveqgllpskgaiaegpsgieeerrlfyvgitramerllmtaaqnrmqfgktnaaedsafledieglfdtvdpygqpiey >4c2u_D:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DEINOCOCCUS RADIODURANS UVRD IN COMPLEX WITH DNA, FORM 1 organism=DEINOCOCCUS RADIODURANS DNA sequence DA(X1):DT(Y18) DC(X2):DG(Y17) DG(X3):DC(Y16) DA(X4):DT(Y15) DC(X5):DG(Y14) DC(X6):DG(Y13) DT(X7):DA(Y12) DG(X8):DC(Y11) DC(X9):DG(Y10) DG(X10):DC(Y9) DA(X11):DT(Y8) DG(X12):DC(Y7) DC(X13):DG(Y6) DA(X14):DT(Y5) DC(X15):DG(Y4) DT(X16):DA(Y3) DG(X17):DC(Y2) chainD (453) ARG459 0 0 0 0 0 0 0 0 0 0 3 11 1 0 0 0 0 prot.sequence sagpdllqalnptqaqaadhftgpalviagagsgktrtliyriahlighygvhpgeilavtftnkaaaemreraghlvpgagdlwmstfhsagvrilrtygehiglrrgfviyddddqldiikevmgsipgetqprvirgiidraksnlwtpddldrsrepfisglprdaaaeayrryevrkkgqnaidfgdlitetvrlfkevpgvldkvqnkakfihvdeyqdtnraqyeltrllasrdrnllvvgdpdqsiykfrgadiqnildfqkdypdakvymlehnyrssarvleaankliennterldktlkpvkeagqpvtfhratdhraegdyvadwltrlhgegrawsemailyrtnaqsrvieeslrrvqiparivggvgfydrreirdilayarlalnpaddvalrriigrprrgigdtalqklmewarthhtsvltacanaaeqnildRgahkatefaglmeamseaadnyepaaflrfvmetsgyldllrqegqegqvrlenleelvsaaeewsqdeanvggsiadflddaallssvddmrtkaenkgapedavtlmtlhnakglefpvvfivgveqgllpskgaiaegpsgieeerrlfyvgitramerllmtaaqnrmqfgktnaaedsafledieglfdtvdpygqpiey >4c30_AD:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DEINOCOCCUS RADIODURANS UVRD IN COMPLEX WITH DNA, FORM 2 organism=DEINOCOCCUS RADIODURANS DNA sequence DG(X1):DC(Y18) DC(X2):DG(Y17) DA(X3):DT(Y16) DG(X4):DC(Y15) DT(X5):DA(Y14) DG(X6):DC(Y13) DC(X7):DG(Y12) DT(X8):DA(Y11) DC(X9):DG(Y10) DG(X10):DC(Y9) DC(X11):DG(Y8) DA(X12):DT(Y7) DG(X13):DC(Y6) DG(X14):DC(Y5) DT(X15):DA(Y4) DC(X16):DG(Y3) DG(X17):DC(Y2) DT(X18):DA(Y1) chainA (603) PHE633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 chainD (613) PHE633 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pdllqalnptqaqaadhftgpalviagagsgktrtliyriahlighygvhpgeilavtftnkaaaemreraghlvpgagdlwmstfhsagvrilrtygehiglrrgfviyddddqldiikevmgsipgigaetqprvirgiidraksnlwtpddldrsrepprdaaaeayrryevrkkgqnaidfgdlitetvrlfkevpgvldkvqnkakfihvdeyqdtnraqyeltrllasrdrnllvvgdpdqsiykfrgadiqnildfqkdypdakvymlehnyrssarvleaankliennterldktlkpvkeagqpvtfhratdhraegdyvadwltrlhgegrawsemailyrtnaqsrvieeslrrvqiparivggvgfydrreirdilayarlalnpaddvalrriigrprrgigdtalqklmewarthhtsvltacanahkatefaglmeamseaadnyepaaflrfvmetsgyldllrqegqegqvrlenleelvsaaeewsqdeaiadflddaallssvddmrtkaepedavtlmtlhnakglefpvvfivgveqgllpskgaiaegpsgieeerrlfyvgitramerllmtaaqnrmqFgktnaaedsafledieglfdtvdpygqp/pdllqalnptqaqaadhftgpalviagagsgktrtliyriahlighygvhpgeilavtftnkaaaemreraghlvpgagdlwmstfhsagvrilrtygehiglrrgfviyddddqldiikevmgsipgetqprvirgiidraksnlwtpddldrsrepfisglprdaaaeayrryevrkkgqnaidfgdlitetvrlfkevpgvldkvqnkakfihvdeyqdtnraqyeltrllasrdrnllvvgdpdqsiykfrgadiqnildfqkdypdakvymlehnyrssarvleaankliennterldktlkpvkeagqpvtfhratdhraegdyvadwltrlhgegrawsemailyrtnaqsrvieeslrrvqiparivggvgfydrreirdilayarlalnpaddvalrriigrprrgigdtalqklmewarthhtsvltacanaaeqnildrgahkatefaglmeamseaadnyepaaflrfvmetsgyldllrqegqegqvrlenleelvsaaeewsqdeagsiadflddaallssvddgapedavtlmtlhnakglefpvvfivgveqgllpskgaiaegpsgieeerrlfyvgitramerllmtaaqnrmqFgktnaaedsafledieglfdtvdpygqpi >4c30_F:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DEINOCOCCUS RADIODURANS UVRD IN COMPLEX WITH DNA, FORM 2 organism=DEINOCOCCUS RADIODURANS DNA sequence DA(L1):DT(K18) DC(L2):DG(K17) DG(L3):DC(K16) DA(L4):DT(K15) DC(L5):DG(K14) DC(L6):DG(K13) DT(L7):DA(K12) DG(L8):DC(K11) DC(L9):DG(K10) DG(L10):DC(K9) DA(L11):DT(K8) DG(L12):DC(K7) DC(L13):DG(K6) DA(L14):DT(K5) DC(L15):DG(K4) DT(L16):DA(K3) DG(L17):DC(K2) DC(L18):DG(K1) chainF (603) PHE633 43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pdllqalnptqaqaadhftgpalviagagsgktrtliyriahlighygvhpgeilavtftnkaaaemreraghlvpgagdlwmstfhsagvrilrtygehiglrrgfviyddddqldiikevmgsipgigaetqprvirgiidraksnlwtpddldrsrepprdaaaeayrryevrkkgqnaidfgdlitetvrlfkevpgvldkvqnkakfihvdeyqdtnraqyeltrllasrdrnllvvgdpdqsiykfrgadiqnildfqkdypdakvymlehnyrssarvleaankliennterldktlkpvkeagqpvtfhratdhraegdyvadwltrlhgegrawsemailyrtnaqsrvieeslrrvqiparivggvgfydrreirdilayarlalnpaddvalrriigrprrgigdtalqklmewarthhtsvltacanahkatefaglmeamseaadnyepaaflrfvmetsgyldllrqegqegqvrlenleelvsaaeewsqdeaiadflddaallssvddmrtkaepedavtlmtlhnakglefpvvfivgveqgllpskgaiaegpsgieeerrlfyvgitramerllmtaaqnrmqFgktnaaedsafledieglfdtvdpygqpi >4c30_FI:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DEINOCOCCUS RADIODURANS UVRD IN COMPLEX WITH DNA, FORM 2 organism=DEINOCOCCUS RADIODURANS DNA sequence DG(K1):DC(L18) DC(K2):DG(L17) DA(K3):DT(L16) DG(K4):DC(L15) DT(K5):DA(L14) DG(K6):DC(L13) DC(K7):DG(L12) DT(K8):DA(L11) DC(K9):DG(L10) DG(K10):DC(L9) DC(K11):DG(L8) DA(K12):DT(L7) DG(K13):DC(L6) DG(K14):DC(L5) DT(K15):DA(L4) DC(K16):DG(L3) DG(K17):DC(L2) DT(K18):DA(L1) chainF (603) PHE633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 chainI (609) PHE633 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pdllqalnptqaqaadhftgpalviagagsgktrtliyriahlighygvhpgeilavtftnkaaaemreraghlvpgagdlwmstfhsagvrilrtygehiglrrgfviyddddqldiikevmgsipgigaetqprvirgiidraksnlwtpddldrsrepprdaaaeayrryevrkkgqnaidfgdlitetvrlfkevpgvldkvqnkakfihvdeyqdtnraqyeltrllasrdrnllvvgdpdqsiykfrgadiqnildfqkdypdakvymlehnyrssarvleaankliennterldktlkpvkeagqpvtfhratdhraegdyvadwltrlhgegrawsemailyrtnaqsrvieeslrrvqiparivggvgfydrreirdilayarlalnpaddvalrriigrprrgigdtalqklmewarthhtsvltacanahkatefaglmeamseaadnyepaaflrfvmetsgyldllrqegqegqvrlenleelvsaaeewsqdeaiadflddaallssvddmrtkaepedavtlmtlhnakglefpvvfivgveqgllpskgaiaegpsgieeerrlfyvgitramerllmtaaqnrmqFgktnaaedsafledieglfdtvdpygqpi/pdllqalnptqaqaadhftgpalviagagsgktrtliyriahlighygvhpgeilavtftnkaaaemreraghlvpgagdlwmstfhsagvrilrtygehiglrrgfviyddddqldiikevmgsipgetqprvirgiidraksnlwtpddldrsrepfisglprdaaaeayrryevrkkgqnaidfgdlitetvrlfkevpgvldkvqnkakfihvdeyqdtnraqyeltrllasrdrnllvvgdpdqsiykfrgadiqnildfqkdypdakvymlehnyrssarvleaankliennterldktlkpvkeagqpvtfhratdhraegdyvadwltrlhgegrawsemailyrtnaqsrvieeslrrvqiparivgydrreirdilayarlalnpaddvalrriigrprrgigdtalqklmewarthhtsvltacanaaeqnildrgahkatefaglmeamseaadnyepaaflrfvmetsgyldllrqegqegqvrlenleelvsaaeewsqdeagsiadflddaallssvddgapedavtlmtlhnakglefpvvfivgveqgllpskgaiaegpsgieeerrlfyvgitramerllmtaaqnrmqFgktnaaedsafledieglfdtvdpygqpi >4c8k_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A PARTIALLY CLOSED COMPLEX WITH THE ARTIFICIAL BASE PAIR D5SICS-DNAMTP organism=THERMUS AQUATICUS DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) DOC(B112):DG(C205) chainA (248) LYS540 0 0 0 0 0 0 0 4 5 0 0 0 (281) ARG573 0 0 0 0 0 0 0 0 0 0 3 11 (288) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 (291) ASN583 0 0 0 0 0 0 0 0 0 9 1 0 (323) GLU615 0 0 0 0 0 0 0 0 0 0 0 1 (379) TYR671 0 0 0 0 0 0 0 0 0 0 0 27 (462) GLN754 0 0 0 0 0 0 0 0 0 0 0 6 (492) HIS784 0 0 0 0 0 0 0 0 0 0 1 1 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlYgmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4c8l_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS WITH THE ARTIFICIAL BASE PAIR DNAM-D5SICS AT THE POSTINSERTION SITE (SEQUENCE CONTEXT 1) organism=THERMUS AQUATICUS DNA sequence DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (248) LYS540 0 0 0 0 0 0 3 6 0 0 (291) ASN583 0 0 0 0 0 0 0 3 11 4 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgrlsssdpnlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvhdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4c8m_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS WITH THE ARITIFICIAL BASE PAIR D5SICS-DNAM AT THE POSTINSERTION SITE (SEQUENCE CONTEXT 2) organism=THERMUS AQUATICUS DNA sequence DG(B102):DC(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (248) LYS540 0 0 0 0 0 0 2 4 1 0 (291) ASN583 0 0 0 0 0 0 0 1 10 3 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgrlsssdpnlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvhdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4c8n_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS WITH THE ARITIFICIAL BASE PAIR DNAM-D5SICS AT THE POSTINSERTION SITE (SEQUENCE CONTEXT 3) organism=THERMUS AQUATICUS DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) chainA (248) LYS540 0 0 5 3 0 0 0 0 0 0 (291) ASN583 4 11 3 0 0 0 0 0 0 0 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgrlsssdpnlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvhdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4c8o_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS WITH THE ARITIFICIAL BASE PAIR DNAM-D5SICS AT THE POSTINSERTION SITE (SEQUENCE CONTEXT 2) organism=THERMUS AQUATICUS DNA sequence DG(B102):DC(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (248) LYS540 0 0 0 0 0 0 3 8 0 0 (291) ASN583 0 0 0 0 0 0 0 3 10 3 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgrlsssdpnlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvhdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4cch_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN AN OPEN BINARY COMPLEX WITH D5SICS AS TEMPLATING NUCLEOTIDE organism=THERMUS AQUATICUS DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) DOC(B112):DG(C205) chainA (247) LYS540 0 0 0 0 0 0 0 4 5 0 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 0 3 7 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 (290) ASN583 0 0 0 0 0 0 0 0 0 9 0 0 (367) TYR671 0 0 0 0 0 0 0 0 0 0 0 35 (450) GLN754 0 0 0 0 0 0 0 0 0 0 0 4 (480) HIS784 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrDqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfrraaktinfgvlYgmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4ceh_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF ADDAB WITH A FORKED DNA SUBSTRATE organism=BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 DNA sequence DT(X7):DA(X49) DC(X8):DG(X48) DT(X9):DA(X47) DA(X10):DT(X46) DA(X11):DT(X45) DT(X12):DA(X44) DG(X13):DC(X43) DC(X14):DG(X42) DG(X15):DC(X41) DA(X16):DT(X40) DG(X17):DC(X39) DC(X18):DG(X38) DA(X19):DT(X37) DC(X20):DG(X36) chainA (284) ARG288 0 0 0 0 0 0 0 0 0 9 11 9 0 0 chainB (1047) ARG1059 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (1062) ARG1074 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence kpadstwtddqwnaivstgqdilvaaaagsgktavlvermirkitaeenpidvdrllvvtftnasaaemkhriaealekelvqrpgslhirrqlsllnrasistlhsfclqvlkkyyylidldpgfriadqtegeligdevldelfedeyakgekaffelvdryttdrhdldlqflvkqvyeysrshpnpeawlesfvhlydvseksaieelpfyqyvkediamvlngakekllraleltkapggpapradnflddlaqideliqhqddfselykrvpavsfkRakavkgdefdpalldeatdlrngakklleklktdyftrspeqhlkslaemkpvietlvqlvisygkrfeaakqeksiidfsdlehyclailtpseaarfyqeqfhevlvdeyqdtnlvqesilqlvtsgpeetgnlfmvgdvkqsiyrfrlaepllflskykrftesgegtgrkidlnknfrsradildstnflfkqlmggkigevdydeqaelklgaaypdndetetelllidnetvqfeakaiakeirklisspfkvydgkkkthrniqyrdivillrsmpwapqimeelraqgipvyanltsgyfeavevavalsvlkvidnpyqdiplasvlrspivgadenelslirlenkkapyyeamkdylaagdrsdelyqklntfyghlqkwrafsknhsvseliwevyrdtkymdyvggmpggkqrqanlrvlydrarqyestafrglfrflrfiermqergddlgtaseqedvvrlmtihsskglefpvvfvaglgrnfnmmdlnksylldkelgfgtkyihpqlrisyptlpliamkkkmrrellseelrvlyvaltrakeklfligsckdhqkqlakwqasasqtdwllpefdryqartyldfigpalarhrdlahadisghparfavqmihsydllserleairrgepvpgsfafdekareqlswtyphqevtqirtkqsvseikrklyrrpafmmkkgltaaekgtamhtvmqhiplshvpsieeaeqtvhrlyekellteeqkdaidieeivqffhteiggqligakwkdreipfslalpakeiypdaepllvqgiidclyetedglyllayksdrieegaapilkkryetqiqlytkaveqiaktkvkgcalyffdgghiltl/gaeflvgrsgsgktkliinsiqdelrrapfgkpiiflvpdqmtflmeyelaktpdmggmiraqvfsfsrlawrvlqhtggmsrpfltstgvqmllrklieehkqefkvyqkasdksgftaqvermltefkryclepedirrmaesgervlseklhdlsilyqqmeksladqylhsedyltllaehiplaedikgahiyvdgfyqftpqefrvleqlmvhaehitfsltadkpsyerephelelfrmtgktyyrlhqkakelnlditykelsgterhtktpelahleaqyearpaipqealtvmqaanrraelegiareihalvrekgyrykdvailarqpedykdmvkevfadyeipyfidgkasmlnhpliefirssldvlkgnwryeavfrcvktellfplnepkakvreqvdqlenyciaygikgdrwtkgdrfqyrrfvsldddfaqtdqeiemenmlndtrdwivpplfqlqkrmkkaktvqekaealyryleetdvplkldqerqraeddgriieaqqhqqawdaviqlleefvemmgddeisldlfqqmieagaesltfslippaldqvfvgnmdlsrmygtsctfvlgandgvlparpdengvlsdddrewlktigvelssggrerlldehfliymafsspsdrlyvsypiadaegktllpsmivkrleelfphhkerlltnepeqvsdeeqlmyvvnksvaqsftasqlrlwtreydisdvwwstynvlmseqdrlqskklfsslffrnevkqlersvsrqlygeriqgsvsrmetfnacpfshfashglhlkerqffkleapdigqlfhsslklisdrlrdekldwrdltkeqcelfsydaverlapklqkeillssnrhyyvkeklqkivtrvsgilsehakasgfvpiglelgfggkgplppltfqlkngctmelvgridrvdkaesskglllrivaykssdkgldlaevyyglalqmltyldlsithsadwlgmratpagvlyfhihdpmiqsnlplgldeieqeifkkfkmkglllgdqevvrlmdttlqegRsniinaglkkdgslRsdsaavgekefdlltkhvrrtfqeageqitdgrvsiepykmknktpctycafksvcqfdesleeneyrplkaekdktilewikkea >4ceh_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF ADDAB WITH A FORKED DNA SUBSTRATE organism=? DNA sequence DT(X7):DA(X49) DC(X8):DG(X48) DT(X9):DA(X47) DA(X10):DT(X46) DA(X11):DT(X45) DT(X12):DA(X44) DG(X13):DC(X43) DC(X14):DG(X42) DG(X15):DC(X41) DA(X16):DT(X40) DG(X17):DC(X39) DC(X18):DG(X38) DA(X19):DT(X37) DC(X20):DG(X36) chainB (1047) ARG1059 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (1062) ARG1074 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence gaeflvgrsgsgktkliinsiqdelrrapfgkpiiflvpdqmtflmeyelaktpdmggmiraqvfsfsrlawrvlqhtggmsrpfltstgvqmllrklieehkqefkvyqkasdksgftaqvermltefkryclepedirrmaesgervlseklhdlsilyqqmeksladqylhsedyltllaehiplaedikgahiyvdgfyqftpqefrvleqlmvhaehitfsltadkpsyerephelelfrmtgktyyrlhqkakelnlditykelsgterhtktpelahleaqyearpaipqealtvmqaanrraelegiareihalvrekgyrykdvailarqpedykdmvkevfadyeipyfidgkasmlnhpliefirssldvlkgnwryeavfrcvktellfplnepkakvreqvdqlenyciaygikgdrwtkgdrfqyrrfvsldddfaqtdqeiemenmlndtrdwivpplfqlqkrmkkaktvqekaealyryleetdvplkldqerqraeddgriieaqqhqqawdaviqlleefvemmgddeisldlfqqmieagaesltfslippaldqvfvgnmdlsrmygtsctfvlgandgvlparpdengvlsdddrewlktigvelssggrerlldehfliymafsspsdrlyvsypiadaegktllpsmivkrleelfphhkerlltnepeqvsdeeqlmyvvnksvaqsftasqlrlwtreydisdvwwstynvlmseqdrlqskklfsslffrnevkqlersvsrqlygeriqgsvsrmetfnacpfshfashglhlkerqffkleapdigqlfhsslklisdrlrdekldwrdltkeqcelfsydaverlapklqkeillssnrhyyvkeklqkivtrvsgilsehakasgfvpiglelgfggkgplppltfqlkngctmelvgridrvdkaesskglllrivaykssdkgldlaevyyglalqmltyldlsithsadwlgmratpagvlyfhihdpmiqsnlplgldeieqeifkkfkmkglllgdqevvrlmdttlqegRsniinaglkkdgslRsdsaavgekefdlltkhvrrtfqeageqitdgrvsiepykmknktpctycafksvcqfdesleeneyrplkaekdktilewikkea >4cei_A:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF ADPNP-BOUND ADDAB WITH A FORKED DNA SUBSTRATE organism=BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 DNA sequence DT(X56) DT(X55) DG(X54) DT(X53) DT(X52) DT(X51) DT(X50) DA(X49) DG(X48) DC(X8):DG(X48) DT(X9):DA(X47) DA(X10):DT(X46) DA(X11):DT(X45) DT(X12):DA(X44) DG(X13):DC(X43) DC(X14):DG(X42) DG(X15):DC(X41) DA(X16):DT(X40) DG(X17):DC(X39) DC(X18):DG(X38) DA(X19):DT(X37) DC(X20):DG(X36) DT(X21):DA(X35) chainA (106) HIS110 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ILE132 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ASP134 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) GLN135 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) GLU186 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 5 0 0 0 (364) PHE368 12 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) PHE446 0 0 14 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ARG447 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (577) ARG590 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (781) HIS794 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (801) ASN814 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (804) ASP817 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpadstwtddqwnaivstgqdilvaaaagsgktavlvermirkitaeenpidvdrllvvtftnasaaemkhriaealekelvqrpgslhirrqlsllnrasistlHsfclqvlkkyyylidldpgfrIaDQtegeligdevldelfedeyakgekaffelvdryttdrhdldlqflvkqvyEysrshpnpeawlesfvhlydvseksaieelpfyqyvkediamvlngakekllraleltkapggpapradnflddlaqideliqhqddfselykrvpavsfkRakavkgdefdpalldeatdlrngakklleklktdyftrspeqhlkslaemkpvietlvqlvisygkrfeaakqeksiidFsdlehyclailtaendkgerepseaarfyqeqfhevlvdeyqdtnlvqesilqlvtsgpeetgnlfmvgdvkqsiyrFRlaepllflskykrftesgegtgrkidlnknfrsradildstnflfkqlmggkigevdydeqaelklgaaypdndetetelllidnaeeletvqfeakaiakeirklisspfkvydgkkkthrniqyrdivillRsmpwapqimeelraqgipvyanltsgyfeavevavalsvlkvidnpyqdiplasvlrspivgadenelslirlenkkapyyeamkdylaagdrsdelyqklntfyghlqkwrafsknhsvseliwevyrdtkymdyvggmpggkqrqanlrvlydrarqyestafrglfrflrfiermqergddlgtarglseqedvvrlmtiHsskglefpvvfvaglgrnfNmmDlnksylldkelgfgtkyihpqlrisyptlpliamkkkmrrellseelrvlyvaltrakeklfligsckdhqkqlakwqasasqtdwllpefdryqartyldfigpalarhrdlhadisghparfavqmihsydllekserleairrgepvpgsfafdekareqlswtyphqevtqirtkqsvseilyrrpafmmkkgltaaekgtamhtvmqhiplshvpsieeaeqtvhrlyekellteeqkdaidieeivqffhteiggqligakwkdreipfslalpakeiypdaheadepllvqgiidclyetedglyllayksdrieaapilkkryetqiqlytkaveqiaktkvkgcalyffdgghiltl >4cei_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF ADPNP-BOUND ADDAB WITH A FORKED DNA SUBSTRATE organism=BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 DNA sequence DT(X56) DT(X55) DG(X54) DT(X53) DT(X52) DT(X51) DT(X50) DA(X49) DG(X48) DC(X8):DG(X48) DT(X9):DA(X47) DA(X10):DT(X46) DA(X11):DT(X45) DT(X12):DA(X44) DG(X13):DC(X43) DC(X14):DG(X42) DG(X15):DC(X41) DA(X16):DT(X40) DG(X17):DC(X39) DC(X18):DG(X38) DA(X19):DT(X37) DC(X20):DG(X36) DT(X21):DA(X35) chainA (106) HIS110 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ILE132 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ASP134 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) GLN135 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) GLU186 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 5 0 0 0 (364) PHE368 12 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) PHE446 0 0 14 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ARG447 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (577) ARG590 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (781) HIS794 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (801) ASN814 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (804) ASP817 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (1052) ARG1059 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (1110) ASN1117 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpadstwtddqwnaivstgqdilvaaaagsgktavlvermirkitaeenpidvdrllvvtftnasaaemkhriaealekelvqrpgslhirrqlsllnrasistlHsfclqvlkkyyylidldpgfrIaDQtegeligdevldelfedeyakgekaffelvdryttdrhdldlqflvkqvyEysrshpnpeawlesfvhlydvseksaieelpfyqyvkediamvlngakekllraleltkapggpapradnflddlaqideliqhqddfselykrvpavsfkRakavkgdefdpalldeatdlrngakklleklktdyftrspeqhlkslaemkpvietlvqlvisygkrfeaakqeksiidFsdlehyclailtaendkgerepseaarfyqeqfhevlvdeyqdtnlvqesilqlvtsgpeetgnlfmvgdvkqsiyrFRlaepllflskykrftesgegtgrkidlnknfrsradildstnflfkqlmggkigevdydeqaelklgaaypdndetetelllidnaeeletvqfeakaiakeirklisspfkvydgkkkthrniqyrdivillRsmpwapqimeelraqgipvyanltsgyfeavevavalsvlkvidnpyqdiplasvlrspivgadenelslirlenkkapyyeamkdylaagdrsdelyqklntfyghlqkwrafsknhsvseliwevyrdtkymdyvggmpggkqrqanlrvlydrarqyestafrglfrflrfiermqergddlgtarglseqedvvrlmtiHsskglefpvvfvaglgrnfNmmDlnksylldkelgfgtkyihpqlrisyptlpliamkkkmrrellseelrvlyvaltrakeklfligsckdhqkqlakwqasasqtdwllpefdryqartyldfigpalarhrdlhadisghparfavqmihsydllekserleairrgepvpgsfafdekareqlswtyphqevtqirtkqsvseilyrrpafmmkkgltaaekgtamhtvmqhiplshvpsieeaeqtvhrlyekellteeqkdaidieeivqffhteiggqligakwkdreipfslalpakeiypdaheadepllvqgiidclyetedglyllayksdrieaapilkkryetqiqlytkaveqiaktkvkgcalyffdgghiltl/gaeflvgrsgsgktkliinsiqdelrrapfgkpiiflvpdqmtflmeyelaktpdmggmiraqvfsfsrlawrvlqhtggmsrpfltstgvqmllrklieehkqefkvyqkasdksgftaqvermltefkryclepedirrmseyrgervlseklhdlsilyqqmeksladqylhsedyltllaehiplaedikgahiyvdgfyqftpqefrvleqlmvhaehitfsltadkpsyerephelelfrmtgktyyrlhqkakelnlditykelsgterhtktpelahleaqyearpaipyaekqealtvmqaanrraelegiareihalvrekgyrykdvailarqpedykdmvkevfadyeipyfidgkasmlnhpliefirssldvlkgnwryeavfrcvktellfplnepkakvreqvdqlenyciaygikgdrwtkgdrfqyrrfvsldddfaqtdqeiemenmlndtrdwivpplfqlqkrmkkaktvqekaealyryleetdvplkldqerqraeddgriieaqqhqqawdaviqlleefvemmgddeisldlfqqmieagaesltfslippaldqvfvgnmdlsrmygtsctfvlgandgvlparpdengvlsdddrewlktigvelssggrerlldehfliymafsspsdrlyvsypiadaegktllpsmivkrleelfphhkerlltnepeqvsdeeqlmyvvnksvaqsftasqlrlwtreydisdvwwstynvlmseqdrlqskklfsslffrnevkqlersvsrqlygeriqgsvsrmetfnacpfshfashglhlkerqffkleapdigqlfhsslklisdrlrdekldwrdltkeqcelfsydaverlapklqkeillssnrhyyvkeklqkivtrvsgilsehakasgfvpiglelgfggkgplppltfqlkngctmelvgridrvdkaesskglllrivaykssdkgldlaevyyglalqmltyldlsithsadwlgmratpagvlyfhihdpmiqsnlplgldeieqeifkkfkmkglllgdqevvrlmdttlqegRsniinaglkkdgslrsdsaavgekefdlltkhvrrtfqeageqitdgrvsiepykmkNktpctycafksvcqfdesleeneyrplkaekdktilewikke >4cej_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF ADDAB-DNA-ADPNP COMPLEX AT 3 ANGSTROM RESOLUTION organism=BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 DNA sequence DT(X68) DT(X67) DG(X66) DG(X65) DC(X64) DG(X63) DA(X62) DT(X61) DT(X60) DT(X59) DT(X58) DT(X57) DT(X56) DT(X55) DG(X54) DT(X53) DT(X52) DT(X51) DT(X50) DA(X49) DT(X7):DA(X49) DC(X8):DG(X48) DT(X9):DA(X47) DA(X10):DT(X46) DA(X11):DT(X45) DT(X12):DA(X44) DG(X13):DC(X43) DC(X14):DG(X42) DG(X15):DC(X41) DA(X16):DT(X40) DG(X17):DC(X39) DC(X18):DG(X38) DA(X19):DT(X37) chainA (101) HIS110 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) LEU114 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) LYS118 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG131 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ILE132 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 1 0 (359) PHE368 0 0 0 0 0 0 0 0 0 0 0 0 16 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) PHE446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG447 0 0 0 0 0 0 0 0 0 0 0 0 0 29 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (569) ARG590 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (773) HIS794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (793) ASN814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (795) MET816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (796) ASP817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (980) LYS1013 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (984) SER1017 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1010) HIS1065 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1074) GLU1129 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1076) PRO1131 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1078) SER1133 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1100) GLN1155 0 0 18 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1102) ILE1157 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 39) PRO40 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ASP41 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR44 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE45 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) LEU46 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) GLU48 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) GLN64 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 10 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) TRP73 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) ARG125 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG132 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) PHE210 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) PHE213 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU217 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) GLN351 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) PHE371 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ASP373 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (586) PHE589 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (594) ARG597 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (643) ARG646 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1056) ARG1059 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence twtddqwnaivstgqdilvaaaagsgktavlvermirkitaeenpidvdrllvvtftnasaaemkhriaealekelvqrpgslhirrqlsllnrasistlHsfcLqvlKkyyylidldpgfRIadqtegeligdevldelfedeyakgekaffelvdryttdrhdldlqflvkqvyeysrshpnpeawlesfvhlydvseksaieelpfyqyvkediamvlngakekllraleltkapggpapradnflddlaqideliqhqddfselykrvpavsfkRakavkgdefdpalldeatdlrngakklleklktdyftrspeqhlkslaemkpvietlvqlvisygkrfeaakqeksiidFsdlehyclailtaendkgerepseaarfyqeqfhevlvdeyqdtnlvqesilqlvtsgpeetgnlfmvgdvkqsiyrFRlaepllflskykrftesgegtgrkidlnknfrsradildstnflfkqlmggkigevdydeqaelklgaaypdndetetelllideletvqfeakaiakeirklisspfkvydgkkkthrniqyrdivillRsmpwapqimeelraqgipvyanltsgyfeavevavalsvlkvidnpyqdiplasvlrspivgadenelslirlenkkapyyeamkdylaagdrsdelyqklntfyghlqkwrafsknhsvseliwevyrdtkymdyvggmpggkqrqanlrvlydrarqyestafrglfrflrfiermqergddlgtarglseqedvvrlmtiHsskglefpvvfvaglgrnfNmMDlnksylldkelgfgtkyihpqlrisyptlpliamkkkmrrellseelrvlyvaltrakeklfligsckdhqkqlakwqasasqtdwllpefdryqartyldfigpalarhrdlhadisghparfavqmihsydlldermeekserleairrgepvpgsfafdekareqlswtyphqevtqirtKqsvSeikryrrpafmmkkgltaaekgtamHtvmqhiplshvpsieeaeqtvhrlyekellteeqkdaidieeivqffhteiggqligakwkdrEiPfSlalpakeiypdaheadepllvQgIidclyetedglyllayksdriegkfqhgfegaapilkkryetqiqlytkaveqiaktkvkgcalyffdgghiltl/gaeflvgrsgsgktkliinsiqdelrrapfgkpiiflvPDQmTFLmEyelaktpdmggmiraQvfsfsRlaWrvlqhtggmsrpfltstgvqmllrklieehkqefkvyqkasdksgftaqveRmltefkRyclepedirrmaesgtayrgervlseklhdlsilyqqmeksladqylhsedyltllaehiplaedikgahiyvdgFyqFtpqEfrvleqlmvhaehitfsltadkpsyerephelelfrmtgktyyrlhqkakelnlditykelsgterhtktpelahleaqyearpaipyaekqealtvmqaanrraelegiareihalvrekgyrykdvailarQpedykdmvkevfadyeipyFiDgkasmlnhpliefirssldvlkgnwryeavfrcvktellfplnepkakvreqvdqlenyciaygikgdrwtkgdrfqyrrfvsldddfaqtdqeiemenmlndtrdwivpplfqlqkrmkkaktvqekaealyryleetdvplkldqerqraeddgriieaqqhqqawdaviqlleefvemmgddeisldlfqqmieagaesltfslippaldqvFvgnmdlsRmygtsctfvlgandgvlparpdengvlsdddrewlktigvelssggreRlldehfliymafsspsdrlyvsypiadaegktllpsmivkrleelfphhkerlltnepeqvsdeeqlmyvvnksvaqsftasqlrlwtreydisdvwwstynvlmseqdrlqskklfsslffrnevkqlersvsrqlygeriqgsvsrmetfnacpfshfashglhlkerqffkleapdigqlfhsslklisdrlrdekldwrdltkeqcelfsydaverlapklqkeillssnrhyyvkeklqkivtrvsgilsehakasgfvpiglelgfggkgplppltfqlkngctmelvgridrvdkaesskglllrivaykssdkgldlaevyyglalqmltyldlsithsadwlgmratpagvlyfhihdpmiqsnlplgldeieqeifkkfkmkglllgdqevvrlmdttlqegRsniinaglkkdgslrsdsaavgekefdlltkhvrrtfqeageqitdgrvsiepykmknktpctycafksvcqfdesleeneyrplkaekdktilewikke >4cej_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF ADDAB-DNA-ADPNP COMPLEX AT 3 ANGSTROM RESOLUTION organism=? DNA sequence DT(X68) DT(X67) DG(X66) DG(X65) DC(X64) DG(X63) DA(X62) DT(X61) DT(X60) DT(X59) DT(X58) DT(X57) DT(X56) DT(X55) DG(X54) DT(X53) DT(X52) DT(X51) DT(X50) DA(X49) DT(X7):DA(X49) DC(X8):DG(X48) DT(X9):DA(X47) DA(X10):DT(X46) DA(X11):DT(X45) DT(X12):DA(X44) DG(X13):DC(X43) DC(X14):DG(X42) DG(X15):DC(X41) DA(X16):DT(X40) DG(X17):DC(X39) DC(X18):DG(X38) DA(X19):DT(X37) chainB ( 39) PRO40 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ASP41 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR44 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE45 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) LEU46 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) GLU48 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) GLN64 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 10 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) TRP73 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) ARG125 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG132 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) PHE210 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) PHE213 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU217 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) GLN351 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) PHE371 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ASP373 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (586) PHE589 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (594) ARG597 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (643) ARG646 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1056) ARG1059 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence gaeflvgrsgsgktkliinsiqdelrrapfgkpiiflvPDQmTFLmEyelaktpdmggmiraQvfsfsRlaWrvlqhtggmsrpfltstgvqmllrklieehkqefkvyqkasdksgftaqveRmltefkRyclepedirrmaesgtayrgervlseklhdlsilyqqmeksladqylhsedyltllaehiplaedikgahiyvdgFyqFtpqEfrvleqlmvhaehitfsltadkpsyerephelelfrmtgktyyrlhqkakelnlditykelsgterhtktpelahleaqyearpaipyaekqealtvmqaanrraelegiareihalvrekgyrykdvailarQpedykdmvkevfadyeipyFiDgkasmlnhpliefirssldvlkgnwryeavfrcvktellfplnepkakvreqvdqlenyciaygikgdrwtkgdrfqyrrfvsldddfaqtdqeiemenmlndtrdwivpplfqlqkrmkkaktvqekaealyryleetdvplkldqerqraeddgriieaqqhqqawdaviqlleefvemmgddeisldlfqqmieagaesltfslippaldqvFvgnmdlsRmygtsctfvlgandgvlparpdengvlsdddrewlktigvelssggreRlldehfliymafsspsdrlyvsypiadaegktllpsmivkrleelfphhkerlltnepeqvsdeeqlmyvvnksvaqsftasqlrlwtreydisdvwwstynvlmseqdrlqskklfsslffrnevkqlersvsrqlygeriqgsvsrmetfnacpfshfashglhlkerqffkleapdigqlfhsslklisdrlrdekldwrdltkeqcelfsydaverlapklqkeillssnrhyyvkeklqkivtrvsgilsehakasgfvpiglelgfggkgplppltfqlkngctmelvgridrvdkaesskglllrivaykssdkgldlaevyyglalqmltyldlsithsadwlgmratpagvlyfhihdpmiqsnlplgldeieqeifkkfkmkglllgdqevvrlmdttlqegRsniinaglkkdgslrsdsaavgekefdlltkhvrrtfqeageqitdgrvsiepykmknktpctycafksvcqfdesleeneyrplkaekdktilewikke >4cgz_A:P-loop_containing_nucleoside_triphosphate_hydrolases;HRDC-like; title=CRYSTAL STRUCTURE OF THE BLOOM'S SYNDROME HELICASE BLM IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DG(C1):DC(B12) DA(C2):DT(B11) DT(C3):DA(B10) DC(C4):DG(B9) DT(C5):DA(B8) DC(C6):DG(B7) DG(C7):DC(B6) DA(C8):DT(B5) DC(C9):DG(B4) DG(C10):DC(B3) DC(C11):DG(B2) DT(C12):DA(B1) chainA (475) SER1123 0 0 0 0 0 0 1 0 0 0 0 0 (514) ASN1162 0 0 0 0 0 0 0 0 0 0 0 7 (515) ALA1163 0 0 0 0 0 0 0 0 0 0 0 1 (516) ASN1164 0 0 0 0 0 0 0 0 0 0 0 16 (518) GLN1166 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence rnlkherfqslsfphtkemmkifhkkfglhnfrtnqleainaallgedcfilmptgggkslcyqlpacvspgvtvvisplrslivdqvqkltsldipatyltgdktdseatniylqlskkdpiikllyvtpekicasnrlistlenlyerkllarfvideahcvsqwghdfrqdykrmnmlrqkfpsvpvmaltatanprvqkdiltqlkilrpqvfsmsfnrhnlkyyvlpkkpkkvafdclewirkhhpydsgiiyclsrrecdtmadtlqrdglaalayhaglsdsardevqqkwinqdgcqvicatiafgmgidkpdvrfvihaslpksvegyyqesgragrdgeishcllfytyhdvtrlkrlimmekdgnhhtrethfnnlysmvhycenitecrriqllayfgengfnpdfckkhpdvscdnccktkdyktrdvtddvksivrfvqehsssgrftmnmlvdiflgskSakiqsgifgkgsaysrhnaerlfkklildkildedlyiNANdQaiayvmlgnkaqtvlngnlkvdfmetekvsqreemvkkclgeltevckslgkvfgvhyfnifntvtlkklaeslssdpevllqidgvtedklekygaevisvlqkysewts >4chu_A:"Winged_helix"_DNA-binding_domain; title=E. COLI ISCR-DNA COMPLEX organism=ESCHERICHIA COLI K-12 DNA sequence DA(C2):DT(D27) DA(C3):DT(D26) DA(C4):DT(D25) DT(C5):DA(D24) DC(C6):DG(D23) DC(C7):DG(D22) DA(C8):DT(D21) DC(C9):DG(D20) DA(C10):DT(D19) DC(C11):DG(D18) DA(C12):DT(D17) DG(C13):DC(D16) DT(C14):DA(D15) DT(C15):DA(D14) DT(C16):DA(D13) DG(C17):DC(D12) DT(C18):DA(D11) DA(C19):DT(D10) DT(C20):DA(D9) DT(C21):DA(D8) DG(C22):DC(D7) DT(C23):DA(D6) DT(C24):DA(D5) DT(C25):DA(D4) DT(C26):DA(D3) DG(C27):DC(D2) chainA ( 39) SER38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 41) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 2 0 0 0 0 0 0 0 ( 42) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 ( 44) GLU43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 10 0 0 0 0 0 ( 45) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 ( 60) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 1 0 0 ( 62) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 6 prot.sequence mgrltskgryavtamldvalnseagpvpladiserqgiSlSYlEQlfsrlrknglvssvRgPgggyllgkdassiavgevisavdesvdkslthalwrdlsdrltgflnnitlgelvnnqevldvs >4chu_AB:"Winged_helix"_DNA-binding_domain; title=E. COLI ISCR-DNA COMPLEX organism=ESCHERICHIA COLI K-12 DNA sequence DC(D2):DG(C27) DA(D3):DT(C26) DA(D4):DT(C25) DA(D5):DT(C24) DA(D6):DT(C23) DC(D7):DG(C22) DA(D8):DT(C21) DA(D9):DT(C20) DT(D10):DA(C19) DA(D11):DT(C18) DC(D12):DG(C17) DA(D13):DT(C16) DA(D14):DT(C15) DA(D15):DT(C14) DC(D16):DG(C13) DT(D17):DA(C12) DG(D18):DC(C11) DT(D19):DA(C10) DG(D20):DC(C9) DT(D21):DA(C8) DG(D22):DC(C7) DG(D23):DC(C6) DA(D24):DT(C5) DT(D25):DA(C4) DT(D26):DA(C3) DT(D27):DA(C2) chainA ( 39) SER38 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER40 0 0 0 0 0 0 0 2 8 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR41 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLU43 0 0 0 0 0 10 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN44 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG59 0 0 1 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PRO61 6 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 38) SER38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 40) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 ( 41) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 ( 43) GLU43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 ( 61) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 prot.sequence mgrltskgryavtamldvalnseagpvpladiserqgiSlSYlEQlfsrlrknglvssvRgPgggyllgkdassiavgevisavdesvdkslthalwrdlsdrltgflnnitlgelvnnqevldvs/grltskgryavtamldvalnseagpvpladiserqgiSlSYlEQlfsrlrknglvssvRgPgggyllgkdassiavgevisavdqgkggsqggdkslthalwrdlsdrltgflnnitlgelvnnqev >4cis_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE OF MUTM IN COMPLEX WITH CARBOCYCLIC 8-OXO-G CONTAINING DNA organism=Lactococcus lactis subsp. cremoris DNA sequence DC(D1):DA(C14) DT(D2):DG(C13) DC(D3):DA(C12) DT(D4):DA(C11) DT(D5):DA(C10) DT(D6):DC(C9) DT(D8):DA(C8) DT(D9):DA(C7) DT(D10):DA(C6) DC(D11):DG(C5) DT(D12):DA(C4) DC(D13):DG(C3) DG(D14):DC(C2) chainA ( 74) ARG74 2 8 4 0 0 0 0 0 0 0 0 0 0 ( 75) MET75 0 17 0 0 0 0 0 0 0 0 0 0 0 (111) PHE111 40 0 0 0 0 0 0 0 0 0 0 0 0 (161) LEU161 3 0 0 0 0 0 0 0 0 0 0 0 0 (162) GLU162 5 0 0 0 0 0 0 0 0 0 0 0 0 (163) GLN163 2 0 0 0 0 0 0 0 0 0 0 0 0 (252) ARG260 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgkiiqgiirrgkylifeigddfrlishlRMegkyrlatldaprekhdhltmkfsdgqliyadvrkFgtwelistdqvlpyflnkkigpeptyedfdeklfreklrkstkkikpylLEQtlvaglgniyvdevlwlakihpekeanqliessihllhdsiieilqkaiklggssitgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpfcqqk >4cis_AB:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE OF MUTM IN COMPLEX WITH CARBOCYCLIC 8-OXO-G CONTAINING DNA organism=Lactococcus lactis subsp. cremoris DNA sequence DC(C2):DG(D14) DG(C3):DC(D13) DA(C4):DT(D12) DG(C5):DC(D11) DA(C6):DT(D10) DA(C7):DT(D9) DA(C8):DT(D8) DC(C9):DT(D6) DA(C10):DT(D5) DA(C11):DT(D4) DA(C12):DC(D3) DG(C13):DT(D2) DA(C14):DC(D1) chainA ( 74) ARG74 0 0 0 0 0 0 0 0 0 0 4 8 2 ( 75) MET75 0 0 0 0 0 0 0 0 0 0 0 17 0 (111) PHE111 0 0 0 0 0 0 0 0 0 0 0 0 40 (161) LEU161 0 0 0 0 0 0 0 0 0 0 0 0 3 (162) GLU162 0 0 0 0 0 0 0 0 0 0 0 0 5 (163) GLN163 0 0 0 0 0 0 0 0 0 0 0 0 2 (252) ARG260 0 0 0 0 0 0 0 0 0 0 0 3 0 chainB ( 74) ARG74 0 0 0 0 0 5 9 0 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 11 0 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 0 33 21 0 0 0 0 (111) PHE111 0 0 0 0 0 0 45 10 0 0 0 0 0 (256) ARG260 0 0 0 0 0 1 5 0 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgkiiqgiirrgkylifeigddfrlishlRMegkyrlatldaprekhdhltmkfsdgqliyadvrkFgtwelistdqvlpyflnkkigpeptyedfdeklfreklrkstkkikpylLEQtlvaglgniyvdevlwlakihpekeanqliessihllhdsiieilqkaiklggssitgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpfcqqk/pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgkiiqgiirrgkylifeigddfrlishlRMegkyrlatldaprekhdhltmkfsdgqliyadvRkFgtwelistdqvlpyflnkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpekeanqliessihllhdsiieilqkaiklggssirlgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpfcqqk >4cja_A:Ankyrin_repeat; title=BURRH DNA-BINDING PROTEIN FROM BURKHOLDERIA RHIZOXINICA IN COMPLEX WITH ITS TARGET DNA organism=BURKHOLDERIA RHIZOXINICA DNA sequence DT(B-1):DA(C21) DT(B0):DA(C20) DA(B1):DT(C19) DA(B2):DT(C18) DG(B3):DC(C17) DA(B4):DT(C16) DG(B5):DC(C15) DA(B6):DT(C14) DA(B7):DT(C13) DG(B8):DC(C12) DC(B9):DG(C11) DA(B10):DT(C10) DA(B11):DT(C9) DA(B12):DT(C8) DT(B13):DA(C7) DA(B14):DT(C6) DC(B15):DG(C5) DG(B16):DC(C4) DT(B17):DA(C3) DT(B18):DA(C2) DA(B19):DT(C1) DT(B20):DA(C0) chainA ( 15) TYR29 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASP61 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) CYS62 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ILE94 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ILE127 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) ASN160 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) THR193 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) ASN226 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ILE259 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ILE292 0 0 0 0 0 0 0 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 (311) ASN325 0 0 0 0 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 0 (344) ASP358 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (377) ILE391 0 0 0 0 0 0 0 0 0 0 4 5 2 0 0 0 0 0 0 0 0 0 (410) ILE424 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 0 (443) THR457 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 (476) ARG490 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 11 11 0 0 0 0 (509) SER523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 (542) ASP556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 2 0 0 0 0 (575) ASN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 1 0 0 0 (674) SER688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 2 (739) ARG753 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 prot.sequence lnlsplerskiekqYggattlafisnkqqelaqilsradilkiasyDCaahalqavldcgpmlgkrgfsqsdivkiagnIggaqalqavldlesmlgkrgfsrddiakmagnIggaqtlqavldlesafrergfsqadivkiagnNggaqalysvldveptlgkrgfsradivkiagnTggaqalhtvldlepalgkrgfsridivkiaanNggaqalhavldlgptlrecgfsqatiakiagnIggaqalqmvldlgpalgkrgfsqatiakiagnIggaqalqtvldlepalcergfsqatiakmagnNggaqalqtvldlepalrkrdfrqadiikiagnDggaqalqaviehgptlrqhgfnladivkmagnIggaqalqavldlkpvldehgfsqpdivkmagnIggaqalqavlslgpalrergfsqpdivkiagnTggaqalqavldleltlvehgfsqpdivritgnRggaqalqavlaleltlrergfsqpdivkiagnSggaqalqavldleltfrergfsqadivkiagnDggtqalhavldlermlgdrgfsradivnvagnNggaqalkavleheatlnergfsradivkiagngggaqalkavleheatldergfsradivriagngggaqalkavlehgptlnergfnltdivemaanSggaqalkavlehgptlrqrglslidiveiasnggaqalkavlkygpvlmqagrsneeivhvaarRggagrirkmvapll >4cn2_CD:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN RAMP2 RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DA(B1):DT(A17) DT(B2):DA(A16) DT(B3):DA(A15) DG(B4):DC(A14) DA(B5):DT(A13) DC(B6):DG(A12) DC(B7):DG(A11) DC(B8):DG(A10) DT(B9):DA(A9) DT(B10):DA(A8) DG(B11):DC(A7) DA(B12):DT(A6) DA(B13):DT(A5) DC(B14):DG(A4) DT(B15):DA(A3) DC(B16):DG(A2) DA(B17):DT(A1) chainC ( 25) GLU153 0 0 0 0 0 0 0 0 0 0 0 5 6 2 0 0 0 ( 28) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 ( 32) LYS160 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 33) ARG161 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 chainD ( 22) GLU153 0 0 0 0 6 11 1 0 0 0 0 0 0 0 0 0 0 ( 25) LYS156 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 ( 29) LYS160 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG161 0 0 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG209 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence mftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeRq/khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeRqrg >4cn2_D:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN RAMP2 RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DT(A1):DA(B17) DG(A2):DC(B16) DA(A3):DT(B15) DG(A4):DC(B14) DT(A5):DA(B13) DT(A6):DA(B12) DC(A7):DG(B11) DA(A8):DT(B10) DA(A9):DT(B9) DG(A10):DC(B8) DG(A11):DC(B7) DG(A12):DC(B6) DT(A13):DA(B5) DC(A14):DG(B4) DA(A15):DT(B3) DA(A16):DT(B2) DT(A17):DA(B1) chainD ( 22) GLU153 0 0 0 0 0 0 0 0 0 0 1 11 6 0 0 0 0 ( 25) LYS156 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 ( 29) LYS160 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 30) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 ( 78) ARG209 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeRqrg >4cn3_AD:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN GDE1SPA RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DA(E3):DT(F15) DG(E4):DC(F14) DT(E5):DA(F13) DT(E6):DA(F12) DC(E7):DG(F11) DA(E8):DT(F10) DA(E9):DT(F9) DA(E10):DT(F8) DG(E11):DC(F7) DT(E12):DA(F6) DT(E13):DA(F5) DC(E14):DG(F4) DA(E15):DT(F3) DC(E16):DG(F2) chainA ( 23) GLU153 0 1 5 7 0 0 0 0 0 0 0 0 0 0 ( 26) LYS156 0 6 7 0 0 0 0 0 0 0 0 0 0 0 ( 30) LYS160 0 0 3 2 0 0 0 0 0 0 0 0 0 0 ( 31) ARG161 0 0 0 0 8 11 0 0 0 0 0 0 0 0 chainD ( 22) GLU153 0 0 0 0 0 0 0 0 0 8 5 0 0 0 ( 25) LYS156 0 0 0 0 0 0 0 0 7 4 0 0 0 0 ( 29) LYS160 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 30) ARG161 0 0 0 0 0 0 0 0 0 0 0 7 9 0 prot.sequence tkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqee/khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrddkdclidkrqrnrcqycryqkclamgmkreavqeeR >4cn3_BC:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN GDE1SPA RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DG(H2):DC(G16) DT(H3):DA(G15) DG(H4):DC(G14) DA(H5):DT(G13) DA(H6):DT(G12) DC(H7):DG(G11) DT(H8):DA(G10) DT(H9):DA(G9) DT(H10):DA(G8) DG(H11):DC(G7) DA(H12):DT(G6) DA(H13):DT(G5) DC(H14):DG(G4) DT(H15):DA(G3) chainB ( 21) GLU153 0 0 0 0 0 0 0 0 0 0 8 8 3 0 ( 24) LYS156 0 0 0 0 0 0 0 0 0 0 0 1 7 0 ( 28) LYS160 0 0 0 0 0 0 0 0 0 0 1 5 0 0 ( 29) ARG161 0 0 0 0 0 0 0 0 11 8 0 0 0 0 chainC ( 28) GLU153 0 0 0 5 5 1 0 0 0 0 0 0 0 0 ( 31) LYS156 0 0 0 0 3 8 0 0 0 0 0 0 0 0 ( 35) LYS160 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 36) ARG161 0 10 5 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG209 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence hicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqee/gshmftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeR >4cn3_D:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN GDE1SPA RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DA(E3):DT(F15) DG(E4):DC(F14) DT(E5):DA(F13) DT(E6):DA(F12) DC(E7):DG(F11) DA(E8):DT(F10) DA(E9):DT(F9) DA(E10):DT(F8) DG(E11):DC(F7) DT(E12):DA(F6) DT(E13):DA(F5) DC(E14):DG(F4) DA(E15):DT(F3) DC(E16):DG(F2) chainD ( 22) GLU153 0 0 0 0 0 0 0 0 0 8 5 0 0 0 ( 25) LYS156 0 0 0 0 0 0 0 0 7 4 0 0 0 0 ( 29) LYS160 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 30) ARG161 0 0 0 0 0 0 0 0 0 0 0 7 9 0 prot.sequence khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrddkdclidkrqrnrcqycryqkclamgmkreavqeeR >4cn5_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN NR1D1 RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DT(C1):DA(D17) DG(C2):DC(D16) DG(C3):DC(D15) DG(C4):DC(D14) DG(C5):DC(D13) DT(C6):DA(D12) DC(C7):DG(D11) DA(C8):DT(D10) DG(C9):DC(D9) DA(C10):DT(D8) DG(C11):DC(D7) DT(C12):DA(D6) DT(C13):DA(D5) DC(C14):DG(D4) DA(C15):DT(D3) DA(C16):DT(D2) DT(C17):DA(D1) chainA ( 25) GLU153 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS156 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LYS160 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG161 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 ( 81) ARG209 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) GLU153 0 0 0 0 0 0 0 0 0 0 1 8 7 0 0 0 0 ( 25) LYS156 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 ( 29) LYS160 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 30) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 prot.sequence mftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeR/khicaicgdrsSgkhygvyscEgcKgffKRtvrkdltytckdclidkrqrnrcqycryqkclamgmkreavqeeR >4cn5_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN NR1D1 RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DA(D1):DT(C17) DT(D2):DA(C16) DT(D3):DA(C15) DG(D4):DC(C14) DA(D5):DT(C13) DA(D6):DT(C12) DC(D7):DG(C11) DT(D8):DA(C10) DC(D9):DG(C9) DT(D10):DA(C8) DG(D11):DC(C7) DA(D12):DT(C6) DC(D13):DG(C5) DC(D14):DG(C4) DC(D15):DG(C3) DC(D16):DG(C2) DA(D17):DT(C1) chainB ( 22) GLU153 0 0 0 0 7 8 1 0 0 0 0 0 0 0 0 0 0 ( 25) LYS156 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 ( 29) LYS160 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG161 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence khicaicgdrsSgkhygvyscEgcKgffKRtvrkdltytckdclidkrqrnrcqycryqkclamgmkreavqeeR >4cn7_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO AN IDEALIZED DR1 RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DC(D1):DG(C16) DT(D2):DA(C15) DG(D3):DC(C14) DA(D4):DT(C13) DC(D5):DG(C12) DC(D6):DG(C11) DT(D7):DA(C10) DT(D8):DA(C9) DT(D9):DA(C8) DG(D10):DC(C7) DA(D11):DT(C6) DC(D12):DG(C5) DC(D13):DG(C4) DT(D14):DA(C3) DA(D15):DT(C2) DG(D16):DC(C1) chainA ( 28) GLU153 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 ( 31) LYS156 0 0 0 0 0 0 0 0 0 0 0 3 9 7 0 0 ( 35) LYS160 0 0 0 0 0 0 0 0 0 0 5 8 2 0 0 0 ( 36) ARG161 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 prot.sequence gshmftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkrea >4cn7_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO AN IDEALIZED DR1 RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DC(D1):DG(C16) DT(D2):DA(C15) DG(D3):DC(C14) DA(D4):DT(C13) DC(D5):DG(C12) DC(D6):DG(C11) DT(D7):DA(C10) DT(D8):DA(C9) DT(D9):DA(C8) DG(D10):DC(C7) DA(D11):DT(C6) DC(D12):DG(C5) DC(D13):DG(C4) DT(D14):DA(C3) DA(D15):DT(C2) DG(D16):DC(C1) chainA ( 28) GLU153 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 ( 31) LYS156 0 0 0 0 0 0 0 0 0 0 0 3 9 7 0 0 ( 35) LYS160 0 0 0 0 0 0 0 0 0 0 5 8 2 0 0 0 ( 36) ARG161 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 chainB ( 22) GLU153 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS156 0 0 0 0 2 7 1 0 0 0 0 0 0 0 0 0 ( 29) LYS160 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG161 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gshmftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkrea/khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeerq >4cn7_EF:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO AN IDEALIZED DR1 RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DC(H1):DG(G16) DT(H2):DA(G15) DG(H3):DC(G14) DA(H4):DT(G13) DC(H5):DG(G12) DC(H6):DG(G11) DT(H7):DA(G10) DT(H8):DA(G9) DT(H9):DA(G8) DG(H10):DC(G7) DA(H11):DT(G6) DC(H12):DG(G5) DC(H13):DG(G4) DT(H14):DA(G3) DA(H15):DT(G2) DG(H16):DC(G1) chainE ( 23) GLU153 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 ( 26) LYS156 0 0 0 0 0 0 0 0 0 0 0 2 7 2 0 0 ( 30) LYS160 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 31) ARG161 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 chainF ( 23) GLU153 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS156 0 0 0 0 2 7 2 0 0 0 0 0 0 0 0 0 ( 30) LYS160 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG161 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqe/tkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeRq >4crx_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=ASYMMETRIC DNA-BENDING IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION SYNAPSE organism=Enterobacteria phage P1 DNA sequence DA(D2):DT(C35) DT(D3):DA(C34) DA(D4):DT(C33) DA(D5):DT(C32) DC(D6):DG(C31) DT(D7):DA(C30) DT(D8):DA(C29) DC(D9):DG(C28) DG(D10):DC(C27) DT(D11):DA(C26) DA(D12):DT(C25) DT(D13):DA(C24) DA(D14):DT(C23) DG(D15):DC(C22) DC(D16):DG(C21) DA(D17):DT(C20) DT(D18):DA(C19) DA(D19):DT(C18) DT(D20):DA(C17) DG(D21):DC(C16) DC(D22):DG(C15) DT(D23):DA(C14) DA(D24):DT(C13) DT(D25):DA(C12) DA(D26):DT(C11) DC(D27):DG(C10) DG(D28):DC(C9) DA(D29):DT(C8) DA(D30):DT(C7) DG(D31):DC(C6) DT(D32):DA(C5) DT(D33):DA(C4) DA(D34):DT(C3) DT(D35):DA(C2) chainA ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 5 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 11 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 7 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 1 8 14 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 2 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 7 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (224) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 (225) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 5 (238) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 16 8 1 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllkiaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllkiaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled >4crx_B:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=ASYMMETRIC DNA-BENDING IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION SYNAPSE organism=Enterobacteria phage P1 DNA sequence DA(C2):DT(D35) DT(C3):DA(D34) DA(C4):DT(D33) DA(C5):DT(D32) DC(C6):DG(D31) DT(C7):DA(D30) DT(C8):DA(D29) DC(C9):DG(D28) DG(C10):DC(D27) DT(C11):DA(D26) DA(C12):DT(D25) DT(C13):DA(D24) DA(C14):DT(D23) DG(C15):DC(D22) DC(C16):DG(D21) DA(C17):DT(D20) DT(C18):DA(D19) DA(C19):DT(D18) DT(C20):DA(D17) DG(C21):DC(D16) DC(C22):DG(D15) DT(C23):DA(D14) DA(C24):DT(D13) DT(C25):DA(D12) DA(C26):DT(D11) DC(C27):DG(D10) DG(C28):DC(D9) DA(C29):DT(D8) DA(C30):DT(D7) DG(C31):DC(D6) DT(C32):DA(D5) DT(C33):DA(D4) DA(C34):DT(D3) DT(C35):DA(D2) chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 2 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 6 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 7 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG243 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 5 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 1 8 16 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllkiaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled >4cyc_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF A UBX-EXD-DNA COMPLEX INCLUDING THE HEXAPEPTIDE AND UBDA MOTIFS organism=DROSOPHILA MELANOGASTER DNA sequence DG(D18):DC(C15) DT(D19):DA(C14) DG(D20):DC(C13) DA(D21):DT(C12) DT(D22):DA(C11) DT(D23):DA(C10) DT(D24):DA(C9) DA(D25):DT(C8) DT(D26):DA(C7) DG(D27):DC(C6) DG(D28):DC(C5) DC(D29):DG(C4) DG(D30):DC(C3) chainA ( 7) ARG5 0 0 0 3 9 11 5 0 0 0 0 0 0 ( 49) ILE47 0 0 0 0 0 0 0 3 4 0 0 0 0 ( 52) GLN50 0 0 0 0 0 0 0 0 0 0 7 5 0 ( 53) ASN51 0 0 0 0 0 0 9 11 0 0 0 0 0 ( 56) MET54 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence fypwmaRqtytryqtlelekefhtnhyltrrrriemahalclterqikIwfQNrrMklkKeiqaik >4cyc_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF A UBX-EXD-DNA COMPLEX INCLUDING THE HEXAPEPTIDE AND UBDA MOTIFS organism=DROSOPHILA MELANOGASTER DNA sequence DC(C3):DG(D30) DG(C4):DC(D29) DC(C5):DG(D28) DC(C6):DG(D27) DA(C7):DT(D26) DT(C8):DA(D25) DA(C9):DT(D24) DA(C10):DT(D23) DA(C11):DT(D22) DT(C12):DA(D21) DC(C13):DG(D20) DA(C14):DT(D19) DC(C15):DG(D18) chainA ( 7) ARG5 0 0 0 0 0 0 5 11 9 3 0 0 0 ( 49) ILE47 0 0 0 0 4 3 0 0 0 0 0 0 0 ( 52) GLN50 0 5 7 0 0 0 0 0 0 0 0 0 0 ( 53) ASN51 0 0 0 0 0 11 9 0 0 0 0 0 0 ( 56) MET54 0 0 0 2 0 0 0 0 0 0 0 0 0 chainB ( 1) ARG3 0 0 0 0 0 0 0 0 0 0 9 5 8 ( 45) ASN47 0 0 0 0 0 0 0 0 3 1 0 0 0 ( 49) ASN51 0 0 0 0 0 0 0 0 1 11 7 0 0 ( 52) ILE54 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 53) ARG55 0 0 0 0 0 0 0 0 0 5 11 11 0 prot.sequence fypwmaRqtytryqtlelekefhtnhyltrrrriemahalclterqikIwfQNrrMklkKeiqaik/RnfskqaseilneyfyshlsnpypseeakeelarkcgitvsqvsNwfgNkrIRykkni >4d1q_H:Ribonuclease_H-like;Hermes_dimerisation_domain; title=HERMES TRANSPOSASE BOUND TO ITS TERMINAL INVERTED REPEAT organism=? DNA sequence DT(L1):DA(K15) DT(L2):DA(K14) DG(L3):DC(K13) DT(L4):DA(K12) DT(L5):DA(K11) DG(L6):DC(K10) DT(L7):DA(K9) DT(L8):DA(K8) DG(L9):DC(K7) DT(L10):DA(K6) DT(L11):DA(K5) DC(L12):DG(K4) DT(L13):DA(K3) DC(L14):DG(K2) DT(L15):DA(K1) chainH (236) ARG318 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 (290) LYS372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (293) GLN375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 (472) GLU572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (473) ARG573 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 (476) SER576 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 prot.sequence lktvsadckkeaiekcaqwvvrdcrpfsavsgsgfidmikffikvgaeygehvnveellpspitlsrkvtsdakekkaligreiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstaeniykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetpelnmpilacknivkyfkkanlqhrlrsslksecptRwnstytmlrsildnwesviqilseagetqrivhinksiiqtmvnildgferifKelQtcsspslcfvvpsilkvkeicspdvgdvadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedlelinrmsssidltshskdisttsfffpqltqnnsreppvcpsdefefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaasERtfSlagniitekrnrigqqtvdsllflnsfyknfck >4d6n_F:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 10 DAYS INCUBATION IN 5MM MG (STATE 7) organism=DESULFUROCOCCUS MOBILIS DNA sequence DC(I1):DG(H25) DG(I2):DC(H24) DC(I3):DG(H23) DG(I4):DC(H22) DC(I5):DG(H21) DC(I6):DG(H20) DG(I7):DC(H19) DG(I8):DC(H18) DA(I9):DT(H17) DA(I10):DT(H16) DC(I11):DG(H15) DT(I12):DA(G14) DT(I13):DA(G13) DA(I14):DT(G12) DC(I15):DG(G11) DC(J16):DG(G10) DC(J17):DG(G9) DG(J18):DC(G8) DG(J19):DC(G7) DC(J20):DG(G6) DA(J21):DT(G5) DA(J22):DT(G4) DG(J23):DC(G3) DG(J24):DC(G2) DC(J25):DG(G1) chainF ( 21) TYR25 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) TYR29 0 0 0 0 2 5 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG33 0 0 5 13 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER34 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) GLU35 0 0 0 0 3 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG37 0 0 0 0 0 0 6 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) VAL39 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR41 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL72 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASP75 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR76 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 0 0 0 0 0 0 8 22 17 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 0 0 6 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) SER83 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 11 17 0 0 0 0 (122) ARG126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 (124) TRP128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 3 0 0 0 0 0 0 0 0 (150) ASP154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 (151) ASP155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 (153) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 17 0 0 0 0 0 0 0 0 (154) HIS158 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 (156) VAL160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (163) LEU167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence envsgisayllgliigdgglYkLkYkgnRSEyRvViTqksenlikqhiaplmqflidelnvkskiQiVkgDTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnisLrdrikfvhtilsshlnplppeaaalehh >4d6o_A:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 1H INCUBATION IN 5MM MG (STATE 2) organism=DESULFUROCOCCUS MOBILIS DNA sequence DC(C1):DG(B25) DG(C2):DC(B24) DC(C3):DG(B23) DG(C4):DC(B22) DC(C5):DG(B21) DC(C6):DG(B20) DG(C7):DC(B19) DG(C8):DC(B18) DA(C9):DT(B17) DA(C10):DT(B16) DC(C11):DG(B15) DT(C12):DA(B14) DT(C13):DA(B13) DA(C14):DT(B12) DC(C15):DG(B11) DC(C16):DG(B10) DC(C17):DG(B9) DG(C18):DC(B8) DG(C19):DC(B7) DC(C20):DG(B6) DA(C21):DT(B5) DA(C22):DT(B4) DG(C23):DC(B3) DG(C24):DC(B2) DC(C25):DG(B1) chainA ( 22) TYR25 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LEU27 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) TYR29 0 0 0 0 2 6 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN32 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG33 0 0 4 14 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER34 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) GLU35 0 0 0 0 3 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG37 0 0 0 0 0 1 6 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) VAL39 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR41 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) GLN70 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) VAL72 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR76 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG77 0 0 0 0 0 0 0 0 0 9 21 18 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) GLU79 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG81 0 0 0 0 0 0 5 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) SER83 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 15 0 0 0 0 (123) ARG126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 1 0 0 0 0 0 0 (125) TRP128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 4 0 0 0 0 0 0 0 0 (151) ASP154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 2 0 0 0 0 0 0 (152) ASP155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (154) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 18 0 0 0 0 0 0 0 0 (155) HIS158 0 0 0 0 0 0 0 0 0 0 0 0 0 12 3 0 0 0 0 0 0 0 0 0 0 (157) VAL160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence nenvsgisayllgliigdgglYkLkYkgNRSEyRvViTqksenlikqhiaplmqflidelvkskiQiVkgDTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnislrdrikfvhtilsshlnpl >4d8j_AB:Ribbon-helix-helix; title=STRUCTURE OF E. COLI MATP-MATS COMPLEX organism=Escherichia coli DNA sequence DT(M1):DA(N19) DT(M2):DA(N18) DC(M3):DG(N17) DG(M4):DC(N16) DT(M5):DA(N15) DG(M6):DC(N14) DA(M7):DT(N13) DC(M8):DG(N12) DA(M9):DT(N11) DA(M10):DT(N10) DT(M11):DA(N9) DG(M12):DC(N8) DT(M13):DA(N7) DC(M14):DG(N6) DA(M15):DT(N5) DC(M16):DG(N4) DG(M17):DC(N3) DA(M18):DT(N2) DA(M19):DT(N1) chainB ( 71) LYS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 72) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 75) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 20 29 0 0 ( 76) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 0 0 0 15 7 1 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 chainA ( 72) GLN72 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG75 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA76 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 1 7 17 0 0 0 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 prot.sequence mkyqqlenlesgwkwkylvkkhregelitryieasaaqeavdvllslenepvlvngwidkhmnpelvnrmkQTiRArrkRhfnaehqhtrkkSiDlefivwqrlaglaqrrgktlsetivqliedaenkekyankmsslkqdlqallgk/mkyqqlenlesgwkwkylvkkhregelitryieasaaqeavdvllslenepvlvngwidkhmnpelvnrmKQTiRArrkRhfnaehqhtrkkSiDlefivwqrlaglaqrrgktlsetivqliedaenkekyankmsslkqdlqallg >4d8j_B:Ribbon-helix-helix; title=STRUCTURE OF E. COLI MATP-MATS COMPLEX organism=Escherichia coli DNA sequence DT(M1):DA(N19) DT(M2):DA(N18) DC(M3):DG(N17) DG(M4):DC(N16) DT(M5):DA(N15) DG(M6):DC(N14) DA(M7):DT(N13) DC(M8):DG(N12) DA(M9):DT(N11) DA(M10):DT(N10) DT(M11):DA(N9) DG(M12):DC(N8) DT(M13):DA(N7) DC(M14):DG(N6) DA(M15):DT(N5) DC(M16):DG(N4) DG(M17):DC(N3) DA(M18):DT(N2) DA(M19):DT(N1) chainB ( 71) LYS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 72) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 75) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 20 29 0 0 ( 76) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 0 0 0 15 7 1 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkyqqlenlesgwkwkylvkkhregelitryieasaaqeavdvllslenepvlvngwidkhmnpelvnrmKQTiRArrkRhfnaehqhtrkkSiDlefivwqrlaglaqrrgktlsetivqliedaenkekyankmsslkqdlqallg >4d8j_CD:Ribbon-helix-helix; title=STRUCTURE OF E. COLI MATP-MATS COMPLEX organism=Escherichia coli DNA sequence DT(E2):DA(F19) DC(E3):DG(F17) DG(E4):DC(F16) DT(E5):DA(F15) DG(E6):DC(F14) DA(E7):DT(F13) DC(E8):DG(F12) DA(E9):DT(F11) DA(E10):DT(F10) DT(E11):DA(F9) DG(E12):DC(F8) DT(E13):DA(F7) DC(E14):DG(F6) DC(E16):DG(F4) DG(E17):DC(F3) DA(E18):DT(F2) DA(E19):DT(F1) chainD ( 72) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 75) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 1 15 17 0 0 ( 76) ALA76 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 0 0 6 9 4 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 chainC ( 72) GLN72 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG75 0 15 16 16 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA76 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 1 12 10 0 0 0 0 0 0 0 0 0 ( 91) LYS91 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 prot.sequence mkyqqlenlesgwkwkylvkkhregelitryieasaaqeavdvllslenepvlvngwidkhmnpelvnrmkQTiRArrkRhfnaehqhtrKkSiDlefivwqrlaglaqrrgktlsetivqliedaenkekyankmsslkqdlqallg/mkyqqlenlesgwkwkylvkkhregelitryieasaaqeavdvllslenepvlvngwidkhmnpelvnrmkQTiRArrkRhfnaehqhtrkkSiDlefivwqrlaglaqrrgktlsetivqliedaenkekyankmsslkqdlqallgk >4d8j_GH:Ribbon-helix-helix; title=STRUCTURE OF E. COLI MATP-MATS COMPLEX organism=Escherichia coli DNA sequence DT(J1):DA(I19) DC(J3):DG(I17) DT(J5):DC(I16) DG(J6):DC(I14) DA(J7):DT(I13) DC(J8):DG(I12) DA(J9):DT(I11) DT(J10):DA(I10) DT(J11):DA(I9) DG(J12):DC(I8) DT(J13):DA(I7) DC(J14):DG(I6) DA(J15):DT(I5) DC(J16):DG(I4) DG(J17):DC(I3) DA(J18):DT(I2) DA(J19):DT(I1) chainH ( 72) GLN72 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG75 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA76 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LYS79 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 2 9 14 0 0 0 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 chainG ( 71) GLN72 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 ( 72) THR73 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 74) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 1 10 11 0 0 ( 75) ALA76 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 ( 78) LYS79 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 79) ARG80 0 0 0 0 0 0 0 0 13 8 2 0 0 0 0 0 0 ( 92) SER93 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 ( 94) ASP95 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kyqqlenlesgwkwkylvkkhregelitryieasaaqeavdvllslenepvlvngwidkhmnpelvnrmkQTiRArrKRhfnaehqhtrkkSiDlefivwqrlaglaqrrgktlsetivqliedaenkekyankmsslkqdlqallgk/mkyqqlenlesgwkwkylvkkhregelitryieasaaqeavdvllslenepvlvngwidkhmnpelvnrmkQtiRArrKRhfnaehqhtrkkSiDlefivwqrlaglaqrrgktlsetivqliedaenkekyankmsslkqdlqallg >4d8j_KL:Ribbon-helix-helix; title=STRUCTURE OF E. COLI MATP-MATS COMPLEX organism=Escherichia coli DNA sequence DT(O1):DA(P19) DT(O2):DA(P18) DG(O4):DC(P16) DT(O5):DA(P15) DG(O6):DC(P14) DA(O7):DT(P13) DC(O8):DG(P12) DA(O9):DT(P11) DA(O10):DT(P10) DT(O11):DA(P9) DG(O12):DC(P8) DT(O13):DA(P7) DC(O14):DG(P6) DA(O15):DT(P5) DC(O16):DG(P4) DG(O17):DC(P3) DA(O18):DT(P2) DA(O19):DT(P1) chainL ( 72) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 75) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 1 11 20 13 0 0 ( 76) ALA76 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 ( 79) LYS79 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 0 0 15 9 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 chainK ( 72) GLN72 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG75 0 0 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA76 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 4 3 18 0 0 0 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 0 4 5 5 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 prot.sequence mkyqqlenlesgwkwkylvkkhregelitryieasaaqeavdvllslenepvlvngwidkhmnpelvnrmkQTiRArrkRhfnaehqhtrkkSiDlefivwqrlaglaqrrgktlsetivqliedaenkekyankmsslkqdlqallg/mkyqqlenlesgwkwkylvkkhregelitryieasaaqeavdvllslenepvlvngwidkhmnpelvnrmkQTiRArrKRhfnaehqhtrkkSiDlefivwqrlaglaqrrgktlsetivqliedaenkekyankmsslkqdlqallgk >4da4_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF MOUSE DNMT1 (731-1602) BOUND TO HEMIMETHYLATED CPG DNA organism=Mus musculus DNA sequence DG(F13):DC(E12) DC(F14):DG(E11) DA(F15):DT(E10) DG(F16):DC(E9) DG(F17):DC(E8) DG(F19):DG(E7) DG(F20):DC(E5) DC(F21):DG(E4) DC(F22):DG(E3) DT(F23):DA(E2) DC(F24):DG(E1) chainB (242) LYS985 0 0 0 0 5 0 0 0 0 0 0 (467) MET1235 0 0 0 0 3 5 0 0 0 0 0 (469) ARG1237 0 0 0 0 0 13 2 0 0 0 0 (470) PHE1238 0 0 0 0 0 0 4 0 0 0 0 (471) ASN1239 0 0 0 0 0 1 0 0 0 0 0 (741) HIS1509 0 0 0 0 0 4 0 0 0 0 0 (742) ASN1510 0 0 4 0 0 0 0 0 0 0 0 (765) GLU1533 0 0 0 0 0 0 0 1 2 0 0 (767) MET1535 0 0 0 0 0 0 1 0 0 0 0 (769) LYS1537 0 0 0 0 5 31 0 0 0 0 0 (770) GLN1538 0 0 0 0 5 0 0 0 0 0 0 prot.sequence driswlgqpmkieenrtyyqkvsideemlevgdcvsvipddsskplylarvtalwedkngqmmfhahwfcagtdtvlgatsdplelflvgecenmqlsyihskvkviykapsenwamegggktyffqlwynqeyarfesppktqptednkhkfclscirlaelrqkempkvleqieevdgrvycssitkngvvyrlgdsvylppeaftfnikvaspvkrpkkdpvnetlypehyrkysdyiKgsnldapepyrigrikeihcgkkkgkvneadiklrlykfyrpenthrsyngsyhtdinmlywsdeeavvnfsdvqgrctveygedllesiqdysqggpdrfyfleaynsktknfedppnharspgniklpklrtldvfsgcgglsegfhqagisetlwaiemwdpaaqafrlnnpgttvftedcnvllklvmagevtnslgqrlpqkgdvemlcggppcqgfsgMnRFNsrtyskfknslvvsflsycdyyrprffllenvrnfvsyrrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapracqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpeiqngasnseipyngeplswfqrqlrgshyqpilrdhickdmsplvaarmrhiplfpgsdwrdlpniqvrlgdgviahklqytfhdvkngysstgalrgvcscaegkacdpesrqfstlipwclphtgnrHNhwaglygrlewdgffsttvtnpEpMgKQgrvlhpeqhrvvsvrecarsqgfpdsyrffgnildrhrqvgnavppplakaigleiklclls >4df4_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH 7-(N-(10- HYDROXYDECANOYL)-AMINOPENTINYL)-7-DEAZA-2 -DATP organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (247) LYS540 0 0 0 0 0 0 0 4 5 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 0 4 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 (290) ASN583 0 0 0 0 0 0 0 0 1 10 1 (461) GLN754 0 0 0 0 0 0 0 0 0 0 1 (491) HIS784 0 0 0 0 0 0 0 0 0 0 2 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4df8_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH AMINOPENTINYL-7- DEAZA-2-DATP organism=Thermus aquaticus DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 5 4 0 0 0 0 0 0 0 (280) ARG573 4 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 1 9 1 0 0 0 0 0 0 0 0 (491) HIS784 1 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4dfj_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH 5-(AMINOPENTINYL)- DTTP organism=Thermus aquaticus DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 5 4 0 0 0 0 0 0 0 (280) ARG573 4 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 1 10 1 0 0 0 0 0 0 0 0 (491) HIS784 1 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4dfk_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH 5-(N-(10-HYDROXYDECANOYL)-AMINOPENTINYL)-2-DUTP organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (247) LYS540 0 0 0 0 0 0 0 4 5 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 0 4 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 (290) ASN583 0 0 0 0 0 0 0 0 1 10 1 (491) HIS784 0 0 0 0 0 0 0 0 0 0 1 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4dfm_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN TERNARY COMPLEX WITH 5-(AMINOPENTINYL)-2-DCTP organism=Thermus aquaticus DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 5 5 0 0 0 0 0 0 0 (280) ARG573 4 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 1 10 2 0 0 0 0 0 0 0 0 (461) GLN754 1 0 0 0 0 0 0 0 0 0 0 (491) HIS784 1 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4dfp_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQAUTICUS IN A TERNARY COMPLEX WITH 7-(AMINOPENTINYL)-7- DEAZA-DGTP organism=Thermus aquaticus DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 5 4 0 0 0 0 0 0 0 (280) ARG573 4 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 1 10 1 0 0 0 0 0 0 0 0 (491) HIS784 2 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4dk9_A:DNA-glycosylase; title=CRYSTAL STRUCTURE OF MBD4 CATALYTIC DOMAIN BOUND TO ABASIC DNA organism=Homo sapiens DNA sequence DG(C13):DC(B11) DT(C14):DA(B10) DC(C15):DG(B9) DC(C16):DG(B8) DA(C17):DT(B7) 3DR(C18):DG(B6) DG(C19):DC(B5) DT(C20):DA(B4) DC(C21):DG(B3) DT(C22):DA(B2) chainA ( 31) ARG468 0 0 0 0 16 7 14 0 0 0 ( 32) THR469 0 0 0 0 0 2 0 0 0 0 ( 71) LEU508 0 0 0 0 0 24 7 0 0 0 prot.sequence wtpprspfnlvqetlfhdpwklliatiflnRTsgkmaipvlwkflekypsaevartadwrdvsellkplgLydlraktivkfsdeyltkqwkypielhgigkygndsyrifcvnewkqvhpedhklnkyhdwlwenhekl >4dkj_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CPG SPECIFIC METHYLTRANSFERASE IN COMPLEX WITH TARGET DNA organism=Mycoplasma penetrans DNA sequence DC(B2):DG(C14) DA(B3):DT(C13) DC(B4):DG(C12) DA(B5):DT(C11) DT(B6):DA(C10) DG(B7):DC(C9) DG(B9):DG(C8) DC(B10):DG(C6) DT(B11):DA(C5) DG(B12):DC(C4) DA(B13):DT(C3) DA(B14):DT(C2) chainA (135) VAL140 0 0 0 0 1 5 0 0 0 0 0 0 (136) GLN141 0 0 0 0 0 16 22 0 0 0 0 0 (297) PHE302 0 0 0 0 0 0 58 0 0 0 0 0 (298) ASN303 0 0 0 0 6 10 6 0 0 0 0 0 (299) SER304 0 0 0 0 0 7 5 0 0 0 0 0 (300) GLU305 0 0 0 0 0 0 0 1 0 0 0 0 (316) SER321 0 0 0 0 0 0 3 5 0 0 0 0 (318) ALA323 0 0 0 0 0 0 1 0 0 0 0 0 (319) ASN324 0 0 0 0 0 1 0 0 0 0 0 0 (321) ARG326 0 0 0 0 0 0 1 7 7 0 0 0 prot.sequence dkikvikvfeafagigsqfkalkniarsknweiqhsgmvewfvdaivsyvaihsknfnpkierldrdilsisndskmpiseygikkinntikasylnyakkhfnnlfdikkvnkdnfpknidiftysfpcqdlsVQglqkgidkelntrsgllweierileeiknsfskeempkyllmenvknllshknkknyntwlkqlekfgyksktyllnsknfdncqnrervfclsirddylektgfkfkelekvknppkkikdilvdssnykylnlnkyetttfretksniisrplknyttFNSEnyvyningigptltaSgANsRikietqqgvryltplecfkymqfdvndfkkvqstnlisenkmiyiagnsipvkileaifntlefvnn >4dl2_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA INSERTING DCMPNPP OPPOSITE CG TEMPLATE (GG0A) organism=Homo sapiens DNA sequence DA(P2):DT(T12) DG(P3):DC(T11) DT(P4):DA(T10) DG(P5):DC(T9) DT(P6):DA(T8) DG(P7):DC(T7) DA(P8):DT(T6) DG(P9):DC(T5) chainA (318) SER322 0 0 0 0 0 0 1 0 (374) LEU378 0 0 0 0 1 0 0 0 (378) ARG382 0 5 7 0 0 0 0 0 prot.sequence atgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4dl3_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA INSERTING DCMPNPP OPPOSITE GG TEMPLATE (GG0B). organism=Homo sapiens DNA sequence DA(P2):DT(T12) DG(P3):DC(T11) DT(P4):DA(T10) DG(P5):DC(T9) DT(P6):DA(T8) DG(P7):DC(T7) DA(P8):DT(T6) DC(P9):DG(T5) chainA (320) SER322 0 0 0 0 0 0 1 0 (376) LEU378 0 0 0 0 2 0 0 0 (380) ARG382 0 5 7 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4dl4_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA INSERTING DCMPNPP OPPOSITE THE 3'G OF CISPLATIN CROSSLINKED GS (PT-GG1). organism=Homo sapiens DNA sequence DC(T5):DG(P9) DT(T6):DA(P8) DC(T7):DG(P7) DA(T8):DT(P6) DC(T9):DG(P5) DA(T10):DT(P4) DC(T11):DG(P3) DT(T12):DA(P2) chainA (319) SER322 0 1 0 0 0 0 0 0 (379) ARG382 0 0 0 0 0 6 4 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4dl5_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA INSERTING DCMPNPP OPPOSITE THE 5'G OF CISPLATIN CROSSLINKED GS (PT-GG2). organism=Homo sapiens DNA sequence DA(P2):DT(T12) DG(P3):DC(T11) DT(P4):DA(T10) DG(P5):DC(T9) DT(P6):DA(T8) DG(P7):DC(T7) DA(P8):DT(T6) DC(P9):DG(T5) chainA (377) ARG382 0 0 4 1 0 0 0 0 prot.sequence atgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntstewsppltmlflcatkfsas >4dl6_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA EXTENDING PRIMER IMMEDIATELY AFTER CISPLATIN CROSSLINK (PT-GG3). organism=Homo sapiens DNA sequence DA(P2):DT(T12) DG(P3):DC(T11) DT(P4):DA(T10) DG(P5):DC(T9) DT(P6):DA(T8) DG(P7):DC(T7) DC(P8):DG(T6) DC(P9):DG(T5) chainA (377) ARG382 0 0 5 0 0 0 0 0 prot.sequence tgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntstewsppltmlflcatkfsas >4dl7_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA FAILS TO EXTEND PRIMER 2 NUCLEOTIDE AFTER CISPLATIN CROSSLINK (PT-GG4). organism=Homo sapiens DNA sequence DC(T5):DG(P9) DG(T6):DC(P8) DG(T7):DC(P7) DT(T8):DA(P6) DC(T9):DG(P5) DA(T10):DT(P4) DC(T11):DG(P3) DT(T12):DA(P2) chainA ( 64) ARG61 9 0 0 0 0 0 0 0 (319) SER322 1 0 0 0 0 0 0 0 (379) ARG382 0 0 0 0 0 6 3 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgtvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntstewsppltmlflcatkfsas >4dle_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY STRUCTURE OF THE LARGE FRAGMENT OF TAQ DNA POLYMERASE: 4- FLUOROPROLINE VARIANT organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) DOC(B112):DG(C205) DCT(A903):DG(C204) chainA (231) LYS540 0 0 0 0 0 0 0 4 5 0 0 0 0 (261) ARG573 0 0 0 0 0 0 0 0 0 0 3 9 0 (267) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 0 (270) ASN583 0 0 0 0 0 0 0 0 1 9 0 0 0 (295) ASP610 0 0 0 0 0 0 0 0 0 0 0 0 7 (297) SER612 0 0 0 0 0 0 0 0 0 0 0 0 2 (298) GLN613 0 0 0 0 0 0 0 0 0 0 0 0 2 (299) ILE614 0 0 0 0 0 0 0 0 0 0 0 0 2 (300) GLU615 0 0 0 0 0 0 0 0 0 0 0 0 1 (324) HIS639 0 0 0 0 0 0 0 0 0 0 0 0 6 (342) ARG659 0 0 0 0 0 0 0 0 0 0 0 0 9 (346) LYS663 0 0 0 0 0 0 0 0 0 0 0 0 9 (347) THR664 0 0 0 0 0 0 0 0 0 0 0 0 6 (350) PHE667 0 0 0 0 0 0 0 0 0 0 0 0 23 (354) TYR671 0 0 0 0 0 0 0 0 0 0 0 0 8 (360) ARG677 0 0 0 0 0 0 0 0 0 0 0 0 5 (430) ASN750 0 0 0 0 0 0 0 0 0 0 0 1 1 (433) GLN754 0 0 0 0 0 0 0 0 0 0 0 4 0 (462) HIS784 0 0 0 0 0 0 0 0 0 0 1 0 0 (463) ASP785 0 0 0 0 0 0 0 0 0 0 0 0 6 prot.sequence leeawegafvgfvlsrkemwadllalaaarggrvhraeykalrdlkeargllakdlsvlalreglglgddmllaylldsnttegvarryggewteeageraalserlfanlwgrlegeerllwlyreverlsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghfnlnsrdqlervlfdelglaigktektgkrstsaavlealreahivekilqyreltKlksTyidldlihrtgrlhtrfnqtatatgRlsssdNlqNivrtlgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvreavdlmrraakTinFgvlYgmsahRlsqelaiyeeaqafieryfqsfkvrawiektleegrrrgyvetlfgrrryvdlearvksvreaaermafNmvQgtaadlmklamvklfrleemgarmllqvHdelvleakeraeavarlakevmegvylavlevevgigedwlsake >4dlg_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY STRUCTURE OF THE LARGE FRAGMENT OF TAQ DNA POLYMERASE organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) DOC(B112):DG(C205) DCT(A901):DG(C204) chainA (248) LYS540 0 0 0 0 0 0 0 4 5 0 0 0 0 (281) ARG573 0 0 0 0 0 0 0 0 0 0 3 8 0 (288) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 0 (291) ASN583 0 0 0 0 0 0 0 0 1 8 0 0 0 (318) ASP610 0 0 0 0 0 0 0 0 0 0 0 0 7 (320) SER612 0 0 0 0 0 0 0 0 0 0 0 0 2 (321) GLN613 0 0 0 0 0 0 0 0 0 0 0 0 4 (322) ILE614 0 0 0 0 0 0 0 0 0 0 0 0 1 (323) GLU615 0 0 0 0 0 0 0 0 0 0 0 0 1 (347) HIS639 0 0 0 0 0 0 0 0 0 0 0 0 7 (367) ARG659 0 0 0 0 0 0 0 0 0 0 0 0 8 (371) LYS663 0 0 0 0 0 0 0 0 0 0 0 0 13 (372) THR664 0 0 0 0 0 0 0 0 0 0 0 0 6 (375) PHE667 0 0 0 0 0 0 0 0 0 0 0 0 31 (379) TYR671 0 0 0 0 0 0 0 0 0 0 0 0 8 (385) ARG677 0 0 0 0 0 0 0 0 0 0 0 0 6 (462) GLN754 0 0 0 0 0 0 0 0 0 0 0 4 0 (492) HIS784 0 0 0 0 0 0 0 0 0 0 2 0 0 (493) ASP785 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraakTinFgvlYgmsahRlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4dm0_A:Ribonuclease_H-like; title=TN5 TRANSPOSASE: 20MER OUTSIDE END 2 MN COMPLEX organism=Escherichia coli DNA sequence DG(C203):DC(B118) DA(C204):DT(B117) DC(C205):DG(B116) DT(C206):DA(B115) DC(C207):DG(B114) DT(C208):DA(B113) DT(C209):DA(B112) DA(C210):DT(B111) DT(C211):DA(B110) DA(C212):DT(B109) DC(C213):DG(B108) DA(C214):DT(B107) DC(C215):DG(B106) DA(C216):DT(B105) DA(C217):DT(B104) DG(C218):DC(B103) DT(C219):DA(B102) DC(C220):DG(B101) chainA (241) GLN243 0 0 0 10 16 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) LYS244 10 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) VAL247 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (328) LYS330 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) SER438 0 0 0 4 6 2 0 0 0 0 0 0 0 0 0 0 0 0 (422) LYS439 0 0 0 9 10 9 0 0 0 0 0 0 0 0 0 0 0 0 (423) ARG440 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 prot.sequence tsalhraadwaksvfssaalgdprrtarlvnvaaqlakysgksitissegskaaqegayrfirnpnvsaeairkagamqtvklaqefpellaiedttslsyrhqvaeelgklgsiqdksrgwwvhsvllleattfrtvgllhqewwmrpddpadadekesgkwlaaaatsrlrmgsmmsnviavcdreadihaylqdklahnerfvvrskhprkdvesglylydhlknqpelggyqisipQKgvVdkrgkrknrparkaslslrsgritlkqgnitlnavlaeeinppkgetplkwllltsepveslaqalrvidiythrwrieefhKawktgagaerqrmekpdnlermvsilsfvavrllqlresftpvesqsaetvltpdecqllgyldkgkrkrkekagslqwaymaiarlggfmdSKRtgiaswgalwegwealqskldgflaakdlmaqgikig >4do9_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-MONOFLUOROMETHYLENE TRIPHOSPHATE: STEREOSELECTIVE BINDING OF R-ISOMER organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 35 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4doa_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-MONOFLUOROMETHYLENE TRIPHOSPHATE: NON-INTERACTIVE BINDING OF S-ISOMER organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 35 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4dob_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-MONOCHLOROROMETHYLENE TRIPHOSPHATE: STEREOSELECTIVE BINDING OF R-ISOMER organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 38 ( 26) LYS35 0 0 0 0 7 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4doc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER AND 2'-DEOXYGUANOSINE 5'-BETA, GAMMA-MONOCHLOROROMETHYLENE TRIPHOSPHATE:BINDING OF S-ISOMER organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 37 ( 26) LYS35 0 0 0 0 5 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4dpv_Z:ssDNA_viruses; title=PARVOVIRUS/DNA COMPLEX organism=CANINE PARVOVIRUS DNA sequence DA(N1) DT(N2) DA(N3) DC(N4) DC(N5) DT(N6) DC(N7) DT(N8) DT(N9) DG(N10) DC(N11) chainZ (120) PHE141 0 5 0 0 0 0 0 0 0 0 0 (121) GLU142 0 1 0 0 0 0 0 0 0 0 0 (122) GLN143 0 4 0 0 0 0 0 0 0 0 0 (152) LEU177 0 13 0 0 0 0 0 0 0 0 0 (154) SER179 0 2 0 0 0 0 0 0 0 0 0 (219) TYR244 0 0 0 0 4 0 0 0 0 0 0 (238) THR263 0 7 0 0 0 0 0 0 0 0 0 (241) PHE266 0 5 33 0 0 0 0 0 0 0 0 (242) PHE267 0 0 4 0 0 0 0 0 0 0 0 (467) ASN492 0 0 0 11 0 0 0 0 0 0 0 (468) ASN493 0 0 3 2 0 0 0 0 0 0 0 (470) PRO495 0 5 0 0 0 0 0 0 0 0 0 prot.sequence gsgngsgggggggsggvgistgtfnnqtefkflengwveitanssrlvhlnmpesenyrrvvvnnmdktavngnmalddihaqivtpwslvdanawgvwfnpgdwqlivntmselhlvsFEQeifnvvlktvsepptkvynndltaslmvaLdSnntmpftpaamrsetlgfypwkptiptpwryyfqwdrtlipshtgtsgtptniyhgtdpddvqfYtiensvpvhllrtgdefaTgtFFfdckpcrlthtwqtnralglppflnslpqsegatnfgdigvqqdkrrgvtqmgntnyiteatimrpaevgysapyysfeastqgpfktpiaagrggaqtdenqaadgnpryafgrqhgqkttttgetperftyiahqdtgrypegdwiqninfnlpvtndnvllptdpiggktginytnifntygpltalnnvppvypngqiwdkefdtdlkprlhvnapfvcqNNcPgqlfvkvapnltneydpdasanmsrivtysdfwwkgklvfkaklrashtwnpiqqmsinvdnqfnyvpsniggmkivyeksqlaprkly >4dqi_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT, DNA DUPLEX, AND DCTP (PAIRED WITH DG OF TEMPLATE) organism=Geobacillus kaustophilus DNA sequence DG(C5):DC(B28) DA(C6):DT(B27) DG(C7):DC(B26) DT(C8):DA(B25) DC(C9):DG(B24) DA(C10):DT(B23) DG(C11):DC(B22) DG(C12):DC(B21) chainA (285) LYS582 0 0 7 4 0 0 0 0 (318) ARG615 4 0 0 0 0 0 0 0 (328) ASN625 1 4 3 0 0 0 0 0 (500) GLN797 1 0 0 0 0 0 0 0 (532) HIS829 2 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4dqp_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT, DNA DUPLEX, AND DDCTP (PAIRED WITH DG OF TEMPLATE) organism=Geobacillus kaustophilus DNA sequence DG(F3):DCT(D901) DG(F4):DOC(E29) DG(F5):DC(E28) DA(F6):DT(E27) DG(F7):DC(E26) DT(F8):DA(E25) DC(F9):DG(E24) DA(F10):DT(E23) DG(F11):DC(E22) DG(F12):DC(E21) chainD (285) LYS582 0 0 0 0 7 3 0 0 0 0 (318) ARG615 0 9 4 0 0 0 0 0 0 0 (328) ASN625 0 0 1 4 3 0 0 0 0 0 (356) ASP653 1 0 0 0 0 0 0 0 0 0 (359) GLN656 8 0 0 0 0 0 0 0 0 0 (361) GLU658 1 0 0 0 0 0 0 0 0 0 (385) HIS682 7 0 0 0 0 0 0 0 0 0 (405) ARG702 7 0 0 0 0 0 0 0 0 0 (409) LYS706 12 0 0 0 0 0 0 0 0 0 (410) ALA707 1 0 0 0 0 0 0 0 0 0 (413) PHE710 31 0 0 0 0 0 0 0 0 0 (417) TYR714 9 0 0 0 0 0 0 0 0 0 (419) ILE716 3 0 0 0 0 0 0 0 0 0 (496) ASN793 1 0 0 0 0 0 0 0 0 0 (500) GLN797 0 4 0 0 0 0 0 0 0 0 (532) HIS829 0 0 1 0 0 0 0 0 0 0 (533) ASP830 7 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnFgivYgIsdyglaqNlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4dqq_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT E658A, DNA DUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE OF MG2+ organism=Geobacillus kaustophilus DNA sequence DG(F5):DC(E28) DA(F6):DT(E27) DG(F7):DC(E26) DT(F8):DA(E25) DC(F9):DG(E24) DA(F10):DT(E23) DG(F11):DC(E22) DG(F12):DC(E21) chainD (290) LYS582 0 0 7 5 1 0 0 0 (323) ARG615 3 0 0 0 0 0 0 0 (333) ASN625 1 4 3 0 0 0 0 0 (337) ARG629 7 0 0 0 0 0 0 0 (537) HIS829 1 0 0 0 0 0 0 0 prot.sequence ekplakmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqialrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4dqr_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT E658A, DNA DUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE OF MN2+ organism=Geobacillus kaustophilus DNA sequence DC(B21):DG(C12) DC(B22):DG(C11) DT(B23):DA(C10) DG(B24):DC(C9) DA(B25):DT(C8) DC(B26):DG(C7) DT(B27):DA(C6) DC(B28):DG(C5) chainA (286) LYS582 0 0 0 1 4 7 0 0 (319) ARG615 0 0 0 0 0 0 0 4 (329) ASN625 0 0 0 0 0 3 4 1 (333) ARG629 0 0 0 0 0 0 0 6 (501) GLN797 0 0 0 0 0 0 0 1 (533) HIS829 0 0 0 0 0 0 0 1 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqialrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4dqs_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT AND DUPLEX DNA WITH RC IN PRIMER TERMINUS PAIRED WITH DG OF TEMPLATE organism=Geobacillus kaustophilus DNA sequence DC(C3) DG(C4) DT(C5) DA(C6) DC(C7) DG(C8) DT(C9) DG(C10) DA(C11) DT(C12) DC(C13) DG(C14) chainA (279) LYS582 0 0 0 0 0 3 0 0 0 0 0 0 (312) ARG615 0 3 2 0 0 0 0 0 0 0 0 0 (322) ASN625 0 0 0 0 1 0 0 0 0 0 0 0 (404) ALA707 1 0 0 0 0 0 0 0 0 0 0 0 (407) PHE710 1 0 0 0 0 0 0 0 0 0 0 0 (411) TYR714 3 51 0 0 0 0 0 0 0 0 0 0 (413) ILE716 3 0 0 0 0 0 0 0 0 0 0 0 (414) SER717 1 0 0 0 0 0 0 0 0 0 0 0 (418) LEU721 7 0 0 0 0 0 0 0 0 0 0 0 (421) ASN724 9 0 0 0 0 0 0 0 0 0 0 0 (494) GLN797 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnFgivYgISdygLaqNlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4dqy_AD:Glucocorticoid_receptor-like_DNA-binding_domain;ADP-ribosylation;Domain_of_polyADP-ribose_polymerase;WGR_domain-like; title=STRUCTURE OF HUMAN PARP-1 BOUND TO A DNA DOUBLE STRAND BREAK organism=HOMO SAPIENS DNA sequence DG(N1):DC(M26) DC(N2):DG(M25) DC(N3):DG(M24) DT(N4):DA(M23) DA(N5):DT(M22) DC(N6):DG(M21) DC(N7):DG(M20) DG(N8):DC(M19) DG(N9):DC(M18) DT(N10):DA(M17) DT(N11):DA(M16) DC(N12):DG(M15) DG(N13):DC(M14) DC(N14):DG(M13) DG(N15):DC(M12) DA(N16):DT(M11) DA(N17):DT(M10) DC(N18):DG(M9) DC(N19):DG(M8) DG(N20):DC(M7) DG(N21):DC(M6) DT(N22):DA(M5) DA(N23):DT(M4) DG(N24):DC(M3) DG(N25):DC(M2) DC(N26):DG(M1) chainA ( 13) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 ( 39) PHE44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 ( 43) VAL48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 chainD ( 13) ARG18 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE44 53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) VAL48 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaea/dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaea >4ds4_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT, DNA DUPLEX, AND RCTP IN PRESENCE OF MN2+ organism=Geobacillus kaustophilus DNA sequence DG(C4):DOC(B29) DG(C5):DC(B28) DA(C6):DT(B27) DG(C7):DC(B26) DT(C8):DA(B25) DC(C9):DG(B24) DA(C10):DT(B23) DG(C11):DC(B22) DG(C12):DC(B21) chainA (286) LYS582 0 0 0 6 3 0 0 0 0 (319) ARG615 10 4 0 0 0 0 0 0 0 (329) ASN625 0 1 4 3 0 0 0 0 0 (333) ARG629 4 2 0 0 0 0 0 0 0 (418) TYR714 50 0 0 0 0 0 0 0 0 (501) GLN797 4 1 0 0 0 0 0 0 0 (533) HIS829 0 2 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4ds5_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT, DNA DUPLEX, AND RCTP IN PRESENCE OF MG2+ organism=Geobacillus kaustophilus DNA sequence DC(E21):DG(F12) DC(E22):DG(F11) DT(E23):DA(F10) DG(E24):DC(F9) DA(E25):DT(F8) DC(E26):DG(F7) DT(E27):DA(F6) DC(E28):DG(F5) DC(E29):DG(F4) chainD (287) LYS582 0 0 0 0 4 7 0 0 0 (320) ARG615 0 0 0 0 0 0 0 4 9 (330) ASN625 0 0 0 0 0 3 6 1 0 (334) ARG629 0 0 0 0 0 0 0 6 4 (482) GLN797 0 0 0 0 0 0 0 1 4 (514) HIS829 0 0 0 0 0 0 0 2 0 prot.sequence lakmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktkavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4dse_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT F710Y, DNA DUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE OF MG2+ organism=Geobacillus kaustophilus DNA sequence DG(F5):DC(E28) DA(F6):DT(E27) DG(F7):DC(E26) DT(F8):DA(E25) DC(F9):DG(E24) DA(F10):DT(E23) DG(F11):DC(E22) DG(F12):DC(E21) chainD (285) LYS582 0 0 7 6 1 0 0 0 (318) ARG615 4 0 0 0 0 0 0 0 (328) ASN625 1 4 3 0 0 0 0 0 (500) GLN797 1 0 0 0 0 0 0 0 (532) HIS829 1 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4dsf_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT F710Y, DNA DUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE OF MN2+ organism=Geobacillus kaustophilus DNA sequence DG(F5):DC(E28) DA(F6):DT(E27) DG(F7):DC(E26) DT(F8):DA(E25) DC(F9):DG(E24) DA(F10):DT(E23) DG(F11):DC(E22) DG(F12):DC(E21) chainD (285) LYS582 0 0 7 6 1 0 0 0 (318) ARG615 4 0 0 0 0 0 0 0 (328) ASN625 1 5 3 0 0 0 0 0 (500) GLN797 1 0 0 0 0 0 0 0 (532) HIS829 1 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4dsi_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS WITH DUPLEX DNA, SE-DGTP AND CALCIUM organism=Geobacillus stearothermophilus DNA sequence DC(B4):DG(C9) DG(B5):DC(C8) DA(B6):DT(C7) DG(B7):DC(C6) DT(B8):DA(C5) DC(B9):DG(C4) DA(B10):DT(C3) DG(B11):DC(C2) DG(B12):DC(C1) chainA (287) LYS582 0 0 0 0 3 5 2 0 0 (292) TYR587 0 0 0 0 0 0 1 0 0 (320) ARG615 0 0 0 0 0 0 0 3 11 (330) ASN625 0 0 0 0 0 3 7 1 0 (334) ARG629 0 0 0 0 0 0 0 6 2 (415) PHE710 0 0 0 0 0 0 0 0 7 (419) TYR714 0 0 0 0 0 0 0 0 31 (498) ASN793 0 0 0 0 0 0 0 0 1 (502) GLN797 0 0 0 0 0 0 0 1 3 (534) HIS829 0 0 0 0 0 0 0 1 0 prot.sequence gskmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4dsj_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS WITH DUPLEX DNA, DGTP AND CALCIUM organism=Geobacillus stearothermophilus DNA sequence DC(D21):DG(C12) DC(D22):DG(C11) DT(D23):DA(C10) DG(D24):DC(C9) DA(D25):DT(C8) DC(D26):DG(C7) DT(D27):DA(C6) DC(D28):DG(C5) DG(D29):DC(C4) DG(D30):DC(C3) chainA (285) LYS582 0 0 0 6 3 0 0 0 0 0 (318) ARG615 8 2 0 0 0 0 0 0 0 0 (328) ASN625 0 0 8 1 0 0 0 0 0 0 (332) ARG629 2 2 0 0 0 0 0 0 0 0 (417) TYR714 31 0 0 0 0 0 0 0 0 0 (496) ASN793 1 0 0 0 0 0 0 0 0 0 (500) GLN797 5 2 0 0 0 0 0 0 0 0 (532) HIS829 0 1 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpdtkkvhtifnqaltqtgRlsstepnlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4dsk_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS WITH DUPLEX DNA, PPI AND CALCIUM organism=Geobacillus stearothermophilus DNA sequence DA(B5):DT(C13) DC(B6):DG(C12) DA(B7):DT(C11) DG(B8):DC(C10) DG(B9):DC(C9) DA(B10):DT(C8) DC(B11):DG(C7) DT(B12):DA(C6) DC(B13):DG(C5) DG(B14):DC(C4) chainA (281) LYS582 0 0 0 0 1 4 4 0 0 0 (314) ARG615 0 0 0 0 0 0 0 0 3 12 (324) ASN625 0 0 0 0 0 0 3 5 1 0 (328) ARG629 0 0 0 0 0 0 0 0 7 3 (413) TYR714 0 0 0 0 0 0 0 0 0 43 (496) GLN797 0 0 0 0 0 0 0 0 1 5 (528) HIS829 0 0 0 0 0 0 0 0 4 1 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4dsl_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS WITH DUPLEX DNA AND CALCIUM organism=Geobacillus stearothermophilus DNA sequence DG(B2):DC(C16) DC(B3):DG(C15) DT(B4):DA(C14) DA(B5):DT(C13) DC(B6):DG(C12) DA(B7):DT(C11) DG(B8):DC(C10) DG(B9):DC(C9) DA(B10):DT(C8) DC(B11):DG(C7) DT(B12):DA(C6) DC(B13):DG(C5) chainA (285) LYS582 0 0 0 0 0 0 0 2 6 0 0 0 (318) ARG615 0 0 0 0 0 0 0 0 0 0 3 10 (325) ASN622 0 0 0 0 0 0 0 0 0 1 0 0 (328) ASN625 0 0 0 0 0 0 0 0 0 8 1 0 (417) TYR714 0 0 0 0 0 0 0 0 0 0 0 53 (496) ASN793 0 0 0 0 0 0 0 0 0 0 0 2 (500) GLN797 0 0 0 0 0 0 0 0 0 0 2 9 (532) HIS829 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4dtj_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP OPPOSITE AN ABASIC SITE AND DDT/DA AS THE PENULTIMATE BASE-PAIR organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DT(P115):DA(T5) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4dtm_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP OPPOSITE AN ABASIC SITE AND DDG/DC AS THE PENULTIMATE BASE-PAIR organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DG(P115):DC(T5) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4dtn_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP OPPOSITE AN ABASIC SITE AND DDA/DT AS THE PENULTIMATE BASE-PAIR organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DA(P115):DT(T5) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 6 7 0 (707) ARG707 0 0 0 0 0 0 0 0 3 0 0 0 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKRyalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >4dto_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP OPPOSITE AN ABASIC SITE AND DDA/DT AS THE PENULTIMATE BASE-PAIR organism=Enterobacteria phage RB69 DNA sequence DT(T5):DA(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 0 7 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >4dtp_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DGTP OPPOSITE AN ABASIC SITE AND DDA/DT AS THE PENULTIMATE BASE-PAIR organism=Enterobacteria phage RB69 DNA sequence DT(T5):DA(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 0 7 5 0 0 0 0 0 0 0 0 0 0 (707) ARG707 0 0 0 0 3 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKRyalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >4dtr_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP OPPOSITE AN ABASIC SITE AND DDC/DG AS THE PENULTIMATE BASE-PAIR organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4dts_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP OPPOSITE AN ABASIC SITE AND DDC/DG AS THE PENULTIMATE BASE-PAIR organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 6 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4dtu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DGTP OPPOSITE AN ABASIC SITE AND DDC/DG AS THE PENULTIMATE BASE-PAIR organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 (800) LYS800 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4dtx_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP OPPOSITE AN ABASIC SITE AND DDC/DG AS THE PENULTIMATE BASE-PAIR organism=Enterobacteria phage RB69 DNA sequence DG(T5):DOC(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 0 7 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4du1_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP OPPOSITE DT organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 6 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 (800) LYS800 0 0 0 0 4 4 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4du3_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DDTP OPPOSITE DT WITH 3- DEAZA-ADENINE AT THE N-1 POSITION OF TEMPLATE STRAND organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 6 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 0 0 0 0 0 0 0 0 (800) LYS800 0 0 0 0 0 0 3 4 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4du4_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP OPPOSITE DT WITH 3- DEAZA-ADENINE AT THE N-3 POSITION OF PRIMER STRAND organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DA(P114):DT(T7) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 11 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfd >4dwi_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS WITH SELF COMPLEMENTARY DNA, SE-DGTP AND CALCIUM organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DT(C3):DA(B10) DG(C4):DC(B9) DG(C5):DC(B8) DA(C6):DT(B7) DT(C7):DA(B6) DC(C8):DG(B5) DC(C9):DG(B4) DA(C10):DT(B3) chainA (287) LYS582 0 0 0 2 5 1 0 0 (292) TYR587 0 0 0 0 0 2 0 0 (320) ARG615 0 0 0 0 0 0 3 8 (327) ASN622 0 0 0 0 0 1 0 0 (330) ASN625 0 0 0 0 1 7 1 0 (334) ARG629 0 0 0 0 0 0 5 2 (419) TYR714 0 0 0 0 0 0 0 50 (502) GLN797 0 0 0 0 0 0 0 3 (534) HIS829 0 0 0 0 0 0 1 0 prot.sequence gskmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4dwp_A:DNA_breaking-rejoining_enzymes; title=SEMET PROTELOMERASE TELA COVALENTLY COMPLEXED WITH SUBSTRATE DNA organism=AGROBACTERIUM TUMEFACIENS DNA sequence DT(C0):DA(D33) DT(C1):DA(D32) DA(C2):DT(D31) DC(C3):DG(D30) DA(C4):DT(D29) DA(C5):DT(D28) DT(C6):DA(D27) DA(C7):DT(D26) DA(C8):DT(D25) DC(C9):DG(D24) DA(C10):DT(D23) DA(C11):DT(D22) DT(C12):DA(D21) DA(C13):DT(D20) chainA ( 22) ALA124 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 24) ARG126 0 0 0 0 0 2 11 6 0 0 0 0 0 0 ( 65) THR167 0 0 0 0 0 0 0 0 0 0 0 7 1 0 ( 66) THR168 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 68) ILE170 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 69) SER171 0 0 0 0 0 0 0 0 0 0 0 4 1 0 ( 70) TYR172 0 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 72) THR174 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 99) TYR201 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (106) LYS208 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (184) LYS286 0 0 0 0 0 0 0 0 0 0 0 0 5 6 (229) ILE331 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (233) SER335 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (237) ARG339 0 0 0 0 0 0 0 0 0 2 4 0 0 0 (238) LEU340 0 0 0 0 0 0 0 4 3 0 0 0 0 0 (241) ARG343 0 0 0 0 0 0 0 3 2 0 0 0 0 0 prot.sequence ypktgvatsivekieraefntAgRkptvllriadfiaamngmdakqdmqalwdaeiaimngraqTTiISYiTKyrnaireafgddhpmlkiatgdaamYdearrvKmekiankhgalitfenyrqvlkicedclkssdplmigigligmtgrrpyevftqaefspapygkgvskwsilfngqaKtkqgegtkfgityeipvltrsetvlaaykrlresgqgklwhgmsIddfSsetRLllRdtvfnlfedvwpkeelpkpyglrhlyaevayhnfapphvtknsyfaailghnnndletslsmtytlpedrdnalarl >4e0d_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT E658A AND DUPLEX DNA organism=Geobacillus kaustophilus DNA sequence DC(B21):DG(C12) DC(B22):DG(C11) DT(B23):DA(C10) DG(B24):DC(C9) DA(B25):DT(C8) DC(B26):DG(C7) DT(B27):DA(C6) DC(B28):DG(C5) chainA (286) LYS582 0 0 0 0 3 5 0 0 (319) ARG615 0 0 0 0 0 0 0 1 (329) ASN625 0 0 0 0 0 3 4 1 (333) ARG629 0 0 0 0 0 0 0 8 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqialrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4e0g_A:DNA_breaking-rejoining_enzymes; title=PROTELOMERASE TELA/DNA HAIRPIN PRODUCT/VANADATE COMPLEX organism=AGROBACTERIUM TUMEFACIENS DNA sequence DC(C1):DG(D32) DA(C2):DT(D31) DT(C3):DA(D30) DA(C4):DT(D29) DA(C5):DT(D28) DT(C6):DA(D27) DA(C7):DT(D26) DA(C8):DT(D25) DC(C9):DG(D24) DA(C10):DT(D23) DA(C11):DT(D22) DT(C12):DA(D21) DA(C13):DT(D20) DT(D14):DA(D19) DC(D15):DG(D18) chainA ( 22) ALA124 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 ( 24) ARG126 0 0 0 0 2 12 3 0 0 0 0 0 0 0 0 ( 65) THR167 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 ( 66) THR168 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 68) ILE170 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 69) SER171 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 ( 70) TYR172 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 72) THR174 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 99) TYR201 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 (103) ARG205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (106) LYS208 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (184) LYS286 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 (186) LYS288 0 0 0 0 0 0 0 0 0 0 0 0 3 4 5 (229) ILE331 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (233) SER335 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (237) ARG339 0 0 0 0 0 0 0 1 5 7 0 0 0 0 0 (238) LEU340 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 (241) ARG343 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 (299) THR401 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence ypktgvatsivekieraefntAgRkptvllriadfiaamngmdakqdmqalwdaeiaimngraqTTiISYiTKyrnaireafgddhpmlkiatgdaamYdeaRrvKmekiankhgalitfenyrqvlkicedclkssdplmigigligmtgrrpyevftqaefspapygkgvskwsilfngqaKtKqgegtkfgityeipvltrsetvlaaykrlresgqgklwhgmsIddfSsetRLllRdtvfnlfedvwpkeelpkpyglrhlyaevayhnfapphvtknsyfaailghnnndleTslsymtytlpedrdnalarl >4e0j_A:DNA_breaking-rejoining_enzymes; title=PROTELOMERASE TELA R255A MUTANT COMPLEXED WITH DNA HAIRPIN PRODUCT organism=AGROBACTERIUM TUMEFACIENS DNA sequence DC(C1):DG(D32) DA(C2):DT(D31) DT(C3):DA(D30) DA(C4):DT(D29) DA(C5):DT(D28) DT(C6):DA(D27) DA(C7):DT(D26) DA(C8):DT(D25) DC(C9):DG(D24) DA(C10):DT(D23) DA(C11):DT(D22) DT(C12):DA(D21) DA(C13):DT(D20) DT(D14):DA(D19) DC(D15):DG(D18) chainA ( 22) ALA124 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 ( 24) ARG126 0 0 0 0 3 11 5 0 0 0 0 0 0 0 0 ( 65) THR167 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 ( 66) THR168 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 68) ILE170 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 69) SER171 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 ( 70) TYR172 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 72) THR174 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 99) TYR201 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 (103) ARG205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (106) LYS208 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 (184) LYS286 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 (186) LYS288 0 0 0 0 0 0 0 0 0 0 0 0 1 3 4 (229) ILE331 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (233) SER335 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (237) ARG339 0 0 0 0 0 0 0 1 1 7 0 0 0 0 0 (238) LEU340 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 (241) ARG343 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 (299) THR401 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence ypktgvatsivekieraefntAgRkptvllriadfiaamngmdakqdmqalwdaeiaimngraqTTiISYiTKyrnaireafgddhpmlkiatgdaamYdeaRrvKmekiankhgalitfenyrqvlkicedclkssdplmigigligmtgrapyevftqaefspapygkgvskwsilfngqaKtKqgegtkfgityeipvltrsetvlaaykrlresgqgklwhgmsIddfSsetRLllRdtvfnlfedvwpkeelpkpyglrhlyaevayhnfapphvtknsyfaailghnnndleTslsymtytlpedrdnalarl >4e0p_A:DNA_breaking-rejoining_enzymes; title=PROTELOMERASE TELA COVALENTLY COMPLEXED WITH SUBSTRATE DNA organism=AGROBACTERIUM TUMEFACIENS DNA sequence DT(D20):DA(C13) DA(D21):DT(C12) DT(D22):DA(C11) DT(D23):DA(C10) DG(D24):DC(C9) DT(D25):DA(C8) DT(D26):DA(C7) DA(D27):DT(C6) DT(D28):DA(C5) DT(D29):DA(C4) DA(D30):DT(C3) DT(D31):DA(C2) DG(D32):DC(C1) chainA ( 22) ALA124 0 0 0 0 0 0 0 0 1 2 2 0 0 ( 24) ARG126 0 0 0 0 0 0 5 12 2 0 0 0 0 ( 65) THR167 0 2 5 0 0 0 0 0 0 0 0 0 0 ( 66) THR168 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 68) ILE170 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER171 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 70) TYR172 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 72) THR174 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) TYR201 1 0 0 0 0 0 0 0 0 0 0 0 0 (106) LYS208 5 0 0 0 0 0 0 0 0 0 0 0 0 (184) LYS286 6 5 0 0 0 0 0 0 0 0 0 0 0 (229) ILE331 0 0 0 2 0 0 0 0 0 0 0 0 0 (233) SER335 0 0 0 1 0 0 0 0 0 0 0 0 0 (237) ARG339 0 0 0 4 5 1 0 0 0 0 0 0 0 (238) LEU340 0 0 0 0 0 2 4 0 0 0 0 0 0 (241) ARG343 0 0 0 0 0 1 3 0 0 0 0 0 0 prot.sequence ypktgvatsivekieraefntAgRkptvllriadfiaamngmdakqdmqalwdaeiaimngraqTTiISYiTkyrnaireafgddhpmlkiatgdaamYdearrvKmekiankhgalitfenyrqvlkicedclkssdplmigigligmtgrrpyevftqaefspapygkgvskwsilfngqaKtkqgegtkfgityeipvltrsetvlaaykrlresgqgklwhgmsIddfSsetRLllRdtvfnlfedvwpkeelpkpyglrhlyaevayhnfapphvtknsyfaailghnnndletslsmtytlpedrdnalar >4e0y_A:DNA_breaking-rejoining_enzymes; title=PROTELOMERASE TELA COVALENTLY COMPLEXED WITH MUTATED SUBSTRATE DNA organism=AGROBACTERIUM TUMEFACIENS DNA sequence DT(D20):DA(C13) DA(D21):DT(C12) DT(D22):DA(C11) DT(D23):DA(C10) DG(D24):DC(C9) DT(D25):DA(C8) DT(D26):DA(C7) DA(D27):DT(C6) DT(D28):DA(C5) DT(D29):DA(C4) DA(D30):DT(C3) DT(D31):DA(C2) DG(D32):DC(C1) chainA ( 22) ALA124 0 0 0 0 0 0 0 0 1 4 3 0 0 ( 24) ARG126 0 0 0 0 0 1 5 12 4 0 0 0 0 ( 65) THR167 0 2 5 0 0 0 0 0 0 0 0 0 0 ( 66) THR168 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 68) ILE170 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER171 0 0 4 1 0 0 0 0 0 0 0 0 0 ( 70) TYR172 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 72) THR174 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) TYR201 1 0 0 0 0 0 0 0 0 0 0 0 0 (106) LYS208 1 0 0 0 0 0 0 0 0 0 0 0 0 (184) LYS286 6 5 0 0 0 0 0 0 0 0 0 0 0 (229) ILE331 0 0 0 2 0 0 0 0 0 0 0 0 0 (233) SER335 0 0 0 1 0 0 0 0 0 0 0 0 0 (237) ARG339 0 0 0 7 2 1 0 0 0 0 0 0 0 (238) LEU340 0 0 0 0 0 4 2 0 0 0 0 0 0 (241) ARG343 0 0 0 0 0 1 2 0 0 0 0 0 0 prot.sequence ypktgvatsivekieraefntAgRkptvllriadfiaamngmdakqdmqalwdaeiaimngraqTTiISYiTkyrnaireafgddhpmlkiatgdaamYdearrvKmekiankhgalitfenyrqvlkicedclkssdplmigigligmtgrrpyevftqaefspapygkgvskwsilfngqaKtkqgegtkfgityeipvltrsetvlaaykrlresgqgklwhgmsIddfSsetRLllRdtvfnlfedvwpkeelpkpyglrhlyaevayhnfapphvtknsyfaailghnnndletslsmtytlpedrdnalar >4e0z_A:DNA_breaking-rejoining_enzymes; title=PROTELOMERASE TELA R205A COVALENTLY COMPLEXED WITH SUBSTRATE DNA organism=AGROBACTERIUM TUMEFACIENS DNA sequence DC(C1):DG(D32) DA(C2):DT(D31) DT(C3):DA(D30) DA(C4):DT(D29) DA(C5):DT(D28) DT(C6):DA(D27) DA(C7):DT(D26) DA(C8):DT(D25) DC(C9):DG(D24) DA(C10):DT(D23) DA(C11):DT(D22) DT(C12):DA(D21) DA(C13):DT(D20) chainA ( 22) ALA124 0 0 1 3 1 0 0 0 0 0 0 0 0 ( 24) ARG126 0 0 0 0 3 11 4 0 0 0 0 0 0 ( 65) THR167 0 0 0 0 0 0 0 0 0 0 5 2 0 ( 66) THR168 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 68) ILE170 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 69) SER171 0 0 0 0 0 0 0 0 0 0 4 1 0 ( 70) TYR172 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 72) THR174 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 99) TYR201 0 0 0 0 0 0 0 0 0 0 0 0 1 (106) LYS208 0 0 0 0 0 0 0 0 0 0 0 0 4 (184) LYS286 0 0 0 0 0 0 0 0 0 0 0 6 6 (229) ILE331 0 0 0 0 0 0 0 0 0 2 0 0 0 (233) SER335 0 0 0 0 0 0 0 0 0 1 0 0 0 (237) ARG339 0 0 0 0 0 0 0 0 2 5 0 0 0 (238) LEU340 0 0 0 0 0 3 5 3 0 0 0 0 0 (241) ARG343 0 0 0 0 0 0 3 1 0 0 0 0 0 prot.sequence ypktgvatsivekieraefntAgRkptvllriadfiaamngmdakqdmqalwdaeiaimngraqTTiISYiTKyrnaireafgddhpmlkiatgdaamYdeaarvKmekiankhgalitfenyrqvlkicedclkssdplmigigligmtgrrpyevftqaefspapygkgvskwsilfngqaKtkqgegtkfgityeipvltrsetvlaaykrlresgqgklwhgmsIddfSsetRLllRdtvfnlfedvwpkeelpkpyglrhlyaevayhnfapphvtknsyfaailghnnndletslsmtytlpedrdnalarl >4e3s_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DQTP OPPOSITE DT organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DOC(P115):DG(T5) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >4e54_B:WD40_repeat-like; title=DAMAGED DNA INDUCED UV-DAMAGED DNA-BINDING PROTEIN (UV-DDB) DIMERIZATION AND ITS ROLES IN CHROMATINIZED DNA REPAIR organism=HOMO SAPIENS DNA sequence DG(F2):DC(G23) DA(F3):DT(G22) DC(F4):DG(G21) DT(F5):DA(G20) DT(F7):DA(G18) DA(F8):DT(G17) DT(F9):DA(G16) DG(F10):DC(G15) DA(F11):DT(G14) DT(F12):DA(G13) DG(F13):DC(G12) DA(F14):3DR(G11) DC(F15):DG(G10) DG(F16):DC(G9) DA(F17):DT(G8) DT(F18):DA(G7) DG(F19):DC(G6) DC(F20):DG(G5) DT(F21):DA(G4) DG(F22):DC(G3) DA(F23):DT(G2) DC(F24):DG(G1) chainB ( 94) ARG113 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (182) ASN201 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (184) TRP203 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (315) PHE334 0 0 0 0 0 0 0 0 0 0 0 5 19 0 0 0 0 0 0 0 0 0 (316) GLN335 0 0 0 0 0 0 0 0 0 44 6 0 0 0 0 0 0 0 0 0 0 0 (317) HIS336 0 0 0 0 0 0 0 0 0 0 0 0 57 0 0 0 0 0 0 0 0 0 (394) TYR413 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence rnkrsrsplelepeakklcakgsgpsrrcdsdclwvglagpqilppcrsivrtlhqhklgraswpsvqqglqqsflhtldsyrilqkaapfdrRatslawhpthpstvavgskggdimlwnfgikdkptfikgigaggsitglkfnplntnqfyassmegttrlqdfkgnilrvfassdtiNiWfcsldvsassrmvvtgdnvgnvillnmdgkelwnlrmhkkkvthvalnpccdwflatasvdqtvkiwdlrqvrgkasflyslphrhpvnaacfspdgarllttdqkseirvysasqwdcplgliphphrhFQHltpikaawhprynlivvgrypdpnfksctpyelrtidvfdgnsgkmmcqlydpessgisslnefnpmgdtlasamgYhiliwsqq >4e5z_B:WD40_repeat-like; title=DAMAGED DNA INDUCED UV-DAMAGED DNA-BINDING PROTEIN (UV-DDB) DIMERIZATION AND ITS ROLES IN CHROMATINIZED DNA REPAIR organism=HOMO SAPIENS DNA sequence DG(G1):DC(F24) DT(G2):DA(F23) DC(G3):DG(F22) DA(G4):DT(F21) DG(G5):DC(F20) DC(G6):DG(F19) DA(G7):DT(F18) DT(G8):DA(F17) DC(G9):DG(F16) DG(G10):DC(F15) DC(G12):DG(F13) DA(G13):DT(F12) DT(G14):DA(F11) DC(G15):DG(F10) DA(G16):DT(F9) DT(G17):DA(F8) DA(G18):DT(F7) DC(G19):DG(F6) DA(G20):DT(F5) DG(G21):DC(F4) DT(G22):DA(F3) DC(G23):DG(F2) DA(G24):DT(F1) chainB (158) MET177 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (315) PHE334 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) GLN335 0 0 0 0 0 0 0 0 0 0 6 32 0 0 0 0 0 0 0 0 0 0 0 (317) HIS336 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rnkrsrsplelepeakklcakgsgpsrrcdsdclwvglagpqilppcrsivrtlhqhklgraswpsvqqglqqsflhtldsyrilqkaapfdrratslawhpthpstvavgskggdimlwnfgikdkptfikgigaggsitglkfnplntnqfyassMegttrlqdfkgnilrvfassdtiniwfcsldvsassrmvvtgdnvgnvillnmdgkelwnlrmhkkkvthvalnpccdwflatasvdqtvkiwdlrqvrgkasflyslphrhpvnaacfspdgarllttdqkseirvysasqwdcplgliphphrhFQHltpikaawhprynlivvgrypdpnfksctpyelrtidvfdgnsgkmmcqlydpessgisslnefnpmgdtlasamgyhiliwseq >4e68_A:p53-like_transcription_factors;STAT;SH2_domain; title=UNPHOSPHORYLATED STAT3B CORE PROTEIN BINDING TO DSDNA organism=Mus musculus DNA sequence DT(B1001) DG(B1002) DC(B1003) DA(B1004) DT(B1005) DT(B1006) DT(B1007) DC(B1008) DC(B1009) DC(B1010) DG(B1011) DT(B1012) DA(B1013) DA(B1014) DA(B1015) DT(B1016) DC(B1017) DT(B1018) chainA (321) SER465 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 (322) ASN466 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 (325) GLN469 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vvtekqqmleqhlqdvrkrvqdleqkmkvvenlqddfdfnyktlksqgdsvtrqkmqqleqmltaldqmrrsivselagllsameyvqktltdeeladwkrrqqiaciggppnicldrlenwitslaesqlqtrqqikkleelqqkvsykgdpivqhrpmleerivelfrnlmksafvverqpcmpmhpdrplviktgvqfttkvrllvkfpelnyqlkikvcidkdsgdvaalrgsrkfnilgtntkvmnmeesnngslsaefkhltlreqrcgnggrancdaslivteelhlitfetevyhqglkidlethslpvvviSNicQmpnawasilwynmltnnpknvnfftkppigtwdqvaevlswqfssttkrglsieqlttlaekllgpgvnysgcqitwakfckenmagkgfsfwvwldniidlvkkyilalwnegyimgfiskererailstkppgtfllrfsesskeggvtftwvekdisgstqiqsvepytkqqlnnmsfaeiimgykimdatnilvsplvylypdipkeeafgkycraapylktkficvtpf >4e7h_A:Ribonuclease_H-like; title=PFV INTASOME PRIOR TO 3'-PROCESSING, APO FORM (UI-APO) organism=Human spumaretrovirus DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 13 9 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >4e7i_A:Ribonuclease_H-like; title=PFV INTASOME FREEZE-TRAPPED PRIOR TO 3'-PROCESSING, MN-BOUND FORM (UI- MN) organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 12 8 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >4e7j_A:Ribonuclease_H-like; title=PFV INTEGRASE TARGET CAPTURE COMPLEX, APO FORM (TCC-APO), AT 3.15 A RESOLUTION organism=Human spumaretrovirus DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (103) ILE112 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ARG114 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) GLN215 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) ARG222 3 9 16 6 0 0 0 0 0 0 0 0 0 0 0 0 (250) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptsh >4e7k_A:Ribonuclease_H-like; title=PFV INTEGRASE TARGET CAPTURE COMPLEX (TCC-MN), FREEZE-TRAPPED PRIOR TO STRAND TRANSFER, AT 3.0 A RESOLUTION organism=Human spumaretrovirus DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (104) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (106) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (207) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (213) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (214) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 5 10 8 3 (251) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence daeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptsh >4e7l_A:Ribonuclease_H-like; title=PFV INTEGRASE STRAND TRANSFER COMPLEX (STC-MN*) FOLLOWING REACTION IN CRYSTALLO, AT 3.0 A RESOLUTION. organism=Human spumaretrovirus DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (103) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (105) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (206) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (212) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (213) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 16 10 4 (250) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence aeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptsh >4e9f_A:DNA-glycosylase; title=STRUCTURE OF THE GLYCOSYLASE DOMAIN OF MBD4 BOUND TO AP SITE CONTAINING DNA organism=Homo sapiens DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DT(D3):DA(C10) DG(D4):DC(C9) DC(D5):DG(C8) DG(D6):3DR(C7) DC(D7):DG(C6) DG(D8):DC(C5) DC(D9):DG(C4) DT(D10):DA(C3) DG(D11):DC(C2) DG(D12):DC(C1) chainA ( 31) ASN467 0 0 0 0 4 0 0 0 0 0 0 0 ( 32) ARG468 0 0 0 0 36 5 7 0 0 0 0 0 ( 33) THR469 0 0 0 0 0 3 0 0 0 0 0 0 ( 72) LEU508 0 0 0 0 14 24 0 0 0 0 0 0 ( 75) LEU511 0 0 0 1 6 0 0 0 0 0 0 0 ( 76) ARG512 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence kwtpprspfnlvqetlfhdpwklliatiflNRTSgkmaipvlwkflekypsaevartadwrdvsellkplgLydLRaktivkfsdeyltkqwkypielhgigkygndsyrifcvnewkqvhpedhklnkyhdwlwenh >4e9g_A:DNA-glycosylase; title=STRUCTURE OF THE GLYCOSYLASE DOMAIN OF MBD4 BOUND TO THYMINE CONTAINING DNA organism=Homo sapiens DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DT(D3):DA(C10) DG(D4):DC(C9) DC(D5):DG(C8) DG(D6):DT(C7) DC(D7):DG(C6) DG(D8):DC(C5) DC(D9):DG(C4) DT(D10):DA(C3) DG(D11):DC(C2) DG(D12):DC(C1) chainA ( 10) LEU447 0 0 0 0 0 6 0 0 0 0 0 0 ( 11) VAL448 0 0 0 0 0 2 0 0 0 0 0 0 ( 12) GLN449 0 0 0 0 0 11 0 0 0 0 0 0 ( 29) LEU466 0 0 0 0 0 14 0 0 0 0 0 0 ( 30) ASN467 0 0 0 0 2 0 0 0 0 0 0 0 ( 31) ARG468 0 0 0 0 30 4 10 0 0 0 0 0 ( 32) THR469 0 0 0 0 0 3 0 0 0 0 0 0 ( 71) LEU508 0 0 0 0 14 23 0 0 0 0 0 0 ( 74) LEU511 0 0 0 1 4 0 0 0 0 0 0 0 (103) TYR540 0 0 0 0 0 9 0 0 0 0 0 0 (125) LYS562 0 0 0 0 0 16 0 0 0 0 0 0 (126) LEU563 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence wtpprspfnLVQetlfhdpwklliatifLNRTsgkmaipvlwkflekypsaevartadwrdvsellkplgLydLraktivkfsdeyltkqwkypielhgigkYgndsyrifcvnewkqvhpeahKLnkyhdwlwenhe >4e9h_A:DNA-glycosylase; title=STRUCTURE OF GLYCOSYLASE DOMAIN OF MBD4 BOUND TO 5HMU CONTAINING DNA organism=Homo sapiens DNA sequence DC(C1):DG(D12) DC(C2):DG(D11) DA(C3):DT(D10) DG(C4):DC(D9) DC(C5):DG(D8) DG(C6):DC(D7) DG(C8):DG(D6) DC(C9):DC(D5) DA(C10):DG(D4) DG(C11):DT(D3) DC(C12):DC(D2) chainA ( 30) ASN467 0 0 0 0 0 0 2 0 0 0 0 ( 31) ARG468 0 0 0 0 0 3 14 0 0 0 0 ( 32) THR469 0 0 0 0 0 0 5 0 0 0 0 ( 33) SER470 0 0 0 0 0 1 0 0 0 0 0 ( 71) LEU508 0 0 0 0 0 0 27 5 0 0 0 ( 74) LEU511 0 0 0 0 0 0 2 2 1 0 0 ( 75) ARG512 0 0 0 0 0 0 1 0 0 0 0 prot.sequence wtpprspfnlvqetlfhdpwklliatiflNRTSgkmaipvlwkflekypsaevartadwrdvsellkplgLydLRaktivkfsdeyltkqwkypielhgigkygndsyrifcvnewkqvhpeahklnkyhdwlwenh >4ea4_A:DNA-glycosylase; title=STRUCTURE OF THE GLYCOSYLASE DOMAIN OF MBD4 BOUND TO 5HMU-CONTAINING DNA organism=Homo sapiens DNA sequence DC(C1):DG(D12) DC(C2):DG(D11) DA(C3):DT(D10) DG(C4):DC(D9) DC(C5):DG(D8) DG(C6):DC(D7) DG(C8):DG(D6) DC(C9):DC(D5) DA(C10):DG(D4) DG(C11):DT(D3) DC(C12):DC(D2) chainA ( 30) ASN467 0 0 0 0 0 0 1 0 0 0 0 ( 31) ARG468 0 0 0 0 0 19 37 3 0 0 0 ( 32) THR469 0 0 0 0 0 0 3 0 0 0 0 ( 71) LEU508 0 0 0 0 0 0 28 4 0 0 0 ( 74) LEU511 0 0 0 0 0 0 1 2 0 0 0 prot.sequence wtpprspfnlvqetlfhdpwklliatiflNRTsgkmaipvlwkflekypsaevartadwrdvsellkplgLydLraktivkfsdeyltkqwkypielhgigkygndsyrifcvnewkqvhpeahklnkyhdwlwenh >4ea5_A:DNA-glycosylase; title=STRUCTURE OF THE GLYCOSLYASE DOMAIN OF MBD4 BOUND TO A 5HMU CONTAINING DNA organism=Homo sapiens DNA sequence DC(C2):DG(D11) DA(C3):DT(D10) DG(C4):DC(D9) DC(C5):DG(D8) DG(C6):DC(D7) 5HU(C7):DG(D6) DG(C8):DC(D5) DC(C9):DG(D4) DA(C10):DT(D3) chainA ( 30) ARG468 0 0 0 0 14 11 31 0 0 ( 31) THR469 0 0 0 0 0 3 0 0 0 ( 70) LEU508 0 0 0 0 0 25 3 0 0 ( 73) LEU511 0 0 0 0 0 0 2 3 0 ( 74) ARG512 0 0 0 0 0 1 0 0 0 prot.sequence tpprspfnlvqetlfhdpwklliatiflNRTsgkmaipvlwkflekypsaevartadwrdvsellkplgLydLRaktivkfsdeyltkqwkypielhgigkygndsyrifcvnewkqvhpeahklnkyhdwlwenh >4ebc_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CONFORMATIONALLY RESTRAINED NORTH-METHANOCARBA-2'-DEOXYADENOSINE CORRECTS THE ERROR-PRONE NATURE OF HUMAN DNA POLYMERASE IOTA organism=Homo sapiens DNA sequence DA(P1):DT(T11) DG(P2):DC(T10) DG(P3):DC(T9) DA(P4):DT(T8) DC(P5):DG(T7) DC(P6):DG(T6) chainA (280) GLU305 0 0 0 0 0 3 (317) ARG343 1 0 0 0 0 0 (329) GLN361 2 0 0 0 0 0 prot.sequence ssrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdrkphtvRliirrygresrQcpipshviqkdvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >4ebd_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CONFORMATIONALLY RESTRAINED NORTH-METHANOCARBA-2'-DEOXYADENOSINE CORRECTS THE ERROR-PRONE NATURE OF HUMAN DNA POLYMERASE IOTA organism=Homo sapiens DNA sequence DA(P1):DT(T11) DG(P2):DC(T10) DG(P3):DC(T9) DA(P4):DT(T8) DC(P5):DG(T7) DC(P6):DG(T6) chainA (280) GLU305 0 0 0 0 0 4 (317) ARG343 2 1 0 0 0 0 (329) GLN361 2 0 0 0 0 0 prot.sequence ssrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdrkphtvRliirrygresrQcpipshviqkdvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >4ebe_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CONFORMATIONALLY RESTRAINED NORTH-METHANOCARBA-2'-DEOXYADENOSINE CORRECTS THE ERROR-PRONE NATURE OF HUMAN DNA POLYMERASE IOTA organism=Homo sapiens DNA sequence DA(P1):DT(T11) DG(P2):DC(T10) DG(P3):DC(T9) DA(P4):DT(T8) DC(P5):DG(T7) DC(P6):DG(T6) chainA (280) GLU305 0 0 0 0 0 2 (317) ARG343 3 1 0 0 0 0 (329) GLN361 2 0 0 0 0 0 prot.sequence ssrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdrkphtvRliirrygResrQcpipshviqkdvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >4ecq_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA- DNA TERNARY COMPLEX: AT CRYSTAL AT PH6.8(K+ MES) WITH 1 CA2+ ION organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 1 0 (380) ARG382 0 8 1 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ecr_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: REACTION IN THE AT CRYSTAL AT PH 7.0 FOR 40 SEC organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 9 14 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ecs_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: REACTION IN THE AT CRYSTAL AT PH 7.0 FOR 80 SEC organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 1 0 (380) ARG382 0 8 4 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ect_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: REACTION IN THE AT CRYSTAL AT PH 7.0 FOR 140 SEC organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 1 0 (380) ARG382 0 7 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ecu_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: REACTION IN THE AT CRYSTAL AT PH 7.0 FOR 200 SEC organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 1 0 0 0 0 0 0 (376) LEU378 0 1 2 0 0 0 0 0 (380) ARG382 0 0 0 0 8 17 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ecv_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: REACTION IN THE AT CRYSTAL AT PH 7.0 FOR 230 SEC organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 1 8 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ecw_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: REACTION IN THE AT CRYSTAL AT PH 7.0 FOR 250 SEC organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (322) SER322 0 1 0 0 0 0 0 0 (378) LEU378 0 3 2 0 0 0 0 0 (382) ARG382 0 0 0 0 10 16 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ecx_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: REACTION IN THE AT CRYSTAL AT PH 7.0 FOR 300 SEC organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 1 (380) ARG382 0 7 4 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ecy_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: AT CRYSTAL AT PH 6.0 (NA+ MES) WITH 1 CA2+ ION organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 2 8 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ecz_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: AT CRYSTAL AT PH 6.5 (NA+ MES) WITH 1 CA2+ ION organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 2 6 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ed0_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: AT CRYSTAL AT PH 6.8 (NA+ MES) WITH 1 CA2+ ION organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 1 7 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ed1_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: AT CRYSTAL AT PH 7.0 (NA+ MES) WITH 1 CA2+ ION organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 2 6 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ed2_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: AT CRYSTAL AT PH 7.2 (NA+ HEPES) WITH 1 CA2+ ION organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 2 7 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ed3_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: AT CRYSTAL AT PH 7.5 (NA+ HEPES) WITH 1 CA2+ ION organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (380) ARG382 0 5 1 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ed6_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: REACTION IN THE AT CRYSTAL AT PH 6.7 FOR 15 HR, SIDEWAY TRANSLOCATION organism=Homo sapiens DNA sequence DT(T4):DA(P9) DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 21) PHE18 10 0 0 0 0 0 0 0 0 ( 41) GLN38 6 0 0 0 0 0 0 0 0 ( 51) ILE48 5 0 0 0 0 0 0 0 0 ( 64) ARG61 5 13 0 0 0 0 0 0 0 ( 92) LEU89 4 0 0 0 0 0 0 0 0 (117) ILE114 1 0 0 0 0 0 0 0 0 (322) SER322 0 0 2 0 0 0 0 0 0 (378) LEU378 0 0 1 0 0 0 0 0 0 (382) ARG382 0 0 0 0 0 10 12 0 0 prot.sequence gphmatgqdrvvalvdmdcfFvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtRsmwaddakklcpdlllaqvresrgkanLtkyreasvevmeimsrfavierasIdeayvdltsavqerlqklqgqpisadllpstyieglpqgpeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ed7_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: TG CRYSTAL AT PH 7.0 (K+ MES) WITH 1 CA2+ ION organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DG(T12):DT(P1) chainA (320) SER322 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 0 6 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4ed8_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: REACTION IN THE TG CRYSTAL AT PH 7.0, NORMAL TRANSLOCATION organism=Homo sapiens DNA sequence DT(P1):DG(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) DA(P9):DT(T4) chainA (322) ASN324 0 0 0 0 0 0 0 0 1 (380) ARG382 0 0 6 0 0 0 0 0 0 (421) PHE423 0 0 0 0 0 0 2 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigskNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >4eey_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA IN TERNARY COMPLEX WITH A CISPLATIN DNA ADDUCT organism=Homo sapiens DNA sequence DT(T6):DA(P9) DC(T7):DG(P8) DT(T8):DA(P7) DC(T9):DG(P6) DC(T10):DG(P5) DT(T11):DA(P4) DC(T12):DG(P3) DC(T13):DG(P2) chainA ( 88) LEU89 1 0 0 0 0 0 0 0 (321) ASN324 1 0 0 0 0 0 0 0 (379) ARG382 0 0 0 0 1 4 0 0 (417) PHE423 0 0 2 0 0 0 0 0 prot.sequence atgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanLtkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpteetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcskNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftviknmntstewsppltmlFlcatkfsas >4efj_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF I-GZEII LAGLIDADG HOMING ENDONUCLEASE IN COMPLEX WITH DNA TARGET SITE organism=Gibberella zeae DNA sequence DC(F1):DG(E26) DC(F2):DG(E25) DT(F3):DA(E24) DT(F4):DA(E23) DT(F5):DA(E22) DG(F6):DC(E21) DT(F7):DA(E20) DA(F8):DT(E19) DC(F9):DG(E18) DC(F10):DG(E17) DA(F11):DT(E16) DA(F12):DT(E15) DT(F13):DA(E14) DA(F14):DT(E13) DT(F15):DA(E12) DG(F16):DC(E11) DG(F17):DC(E10) DT(F18):DA(E9) DA(F19):DT(E8) DC(F20):DG(E7) DC(F21):DG(E6) DC(F22):DG(E5) DA(F23):DT(E4) DT(F24):DA(E3) DC(F25):DG(E2) DC(F26):DG(E1) chainA ( 18) MET23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 20) HIS25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 22) GLU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 ( 29) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 17 0 0 0 ( 31) ARG36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 14 0 0 0 0 ( 35) GLN40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 3 0 0 0 0 0 0 0 0 ( 37) LYS42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 15 8 0 0 0 0 0 0 0 0 0 ( 60) ASN65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 ( 65) GLU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 2 0 0 0 0 0 0 0 0 0 ( 69) LYS74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 ( 71) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 18 0 0 0 0 0 (113) SER118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (174) SER179 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) TYR183 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR190 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) SER192 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) ARG196 0 0 0 0 0 0 0 2 13 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) SER198 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ASN220 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) HIS222 0 0 0 0 0 0 0 0 0 11 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) ASN223 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) ALA228 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) VAL232 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) ARG234 0 0 0 0 5 16 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sinpwfvtgftdaegsfMiHlEknkdkwRvRptfQiKldirdkslleeiknyfnntgsiNtsnkEcvyKvRslkdisiiishfdkynlitqkkadfelfkkiinklnsqehlSyevgatvlqeiisirasmnlglsssvkedfphiipsnrplienmniphpewmagfvsgegSfsvYttsddkYvSlSfRvSqhnkdkqllksfvdffgcggfNyHNkgnkAvifVtRkfedindkiiplfneykikgvkykdfkdwskvakmieskshlttngykeickikenmnsyrk >4egy_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ARAR(DBD) IN COMPLEX WITH OPERATOR ORA1 organism=Bacillus subtilis DNA sequence DA(T2):DT(U42) DA(T3):DT(U41) DT(T4):DA(U40) DA(T5):DT(U39) DT(T6):DA(U38) DT(T7):DA(U37) DT(T8):DA(U36) DG(T9):DC(U35) DT(T10):DA(U34) DA(T11):DT(U33) DC(T12):DG(U32) DG(T13):DC(U31) DA(T14):DT(U30) DA(T15):DT(U29) DC(T16):DG(U28) DA(T17):DT(U27) DA(T18):DT(U26) DT(T19):DA(U25) DT(T20):DA(U24) DT(T21):DA(U23) chainA ( 43) GLU30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 53) SER40 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 54) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 15 0 0 0 0 ( 55) HIS42 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 ( 58) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 ( 74) GLN61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 chainB ( 32) GLU30 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER40 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 43) ARG41 0 0 0 0 0 0 11 11 2 0 0 0 0 0 0 0 0 0 0 0 ( 44) HIS42 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 ( 47) ARG45 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 ( 63) GLN61 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence levlfqgplgsefmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva/efmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva >4egy_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ARAR(DBD) IN COMPLEX WITH OPERATOR ORA1 organism=Bacillus subtilis DNA sequence DA(T2):DT(U42) DA(T3):DT(U41) DT(T4):DA(U40) DA(T5):DT(U39) DT(T6):DA(U38) DT(T7):DA(U37) DT(T8):DA(U36) DG(T9):DC(U35) DT(T10):DA(U34) DA(T11):DT(U33) DC(T12):DG(U32) DG(T13):DC(U31) DA(T14):DT(U30) DA(T15):DT(U29) DC(T16):DG(U28) DA(T17):DT(U27) DA(T18):DT(U26) DT(T19):DA(U25) DT(T20):DA(U24) DT(T21):DA(U23) chainB ( 32) GLU30 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER40 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 43) ARG41 0 0 0 0 0 0 11 11 2 0 0 0 0 0 0 0 0 0 0 0 ( 44) HIS42 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 ( 47) ARG45 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 ( 63) GLN61 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva >4egz_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ARAR(DBD) IN COMPLEX WITH OPERATOR ORR3 organism=Bacillus subtilis DNA sequence DA(T700):DT(U719) DA(T701):DT(U718) DT(T702):DA(U717) DT(T703):DA(U716) DT(T704):DA(U715) DG(T705):DC(U714) DT(T706):DA(U713) DC(T707):DG(U712) DC(T708):DG(U711) DG(T709):DC(U710) DT(T710):DA(U709) DA(T711):DT(U708) DT(T712):DA(U707) DA(T713):DT(U706) DC(T714):DG(U705) DA(T715):DT(U704) DT(T716):DA(U703) DT(T717):DA(U702) DT(T718):DA(U701) DT(T719):DA(U700) chainA ( 43) GLU30 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) SER40 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 54) ARG41 0 0 0 0 14 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG45 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLN61 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence levlfqgplgsefmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSRhtiRkaigdlvsqgllysvQgggtfva >4egz_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ARAR(DBD) IN COMPLEX WITH OPERATOR ORR3 organism=Bacillus subtilis DNA sequence DA(T700):DT(U719) DA(T701):DT(U718) DT(T702):DA(U717) DT(T703):DA(U716) DT(T704):DA(U715) DG(T705):DC(U714) DT(T706):DA(U713) DC(T707):DG(U712) DC(T708):DG(U711) DG(T709):DC(U710) DT(T710):DA(U709) DA(T711):DT(U708) DT(T712):DA(U707) DA(T713):DT(U706) DC(T714):DG(U705) DA(T715):DT(U704) DT(T716):DA(U703) DT(T717):DA(U702) DT(T718):DA(U701) DT(T719):DA(U700) chainA ( 43) GLU30 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) SER40 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 54) ARG41 0 0 0 0 14 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG45 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLN61 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 45) GLU30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 55) SER40 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 56) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 15 0 0 0 0 ( 57) HIS42 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 60) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 ( 76) GLN61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 prot.sequence levlfqgplgsefmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSRhtiRkaigdlvsqgllysvQgggtfva/hhlevlfqgplgsefmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva >4ejy_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURE OF MBOGG1 IN COMPLEX WITH HIGH AFFINITY DNA LIGAND organism=Thermoanaerobacter tengcongensis DNA sequence DG(C12):DC(D16) DC(C13):DG(D15) DG(C14):DC(D14) DT(C15):DA(D13) DC(C16):DG(D12) DC(C17):DG(D11) DA(C18):DT(D10) 3DR(C19):DC(D9) DG(C20):DC(D8) DT(C21):DA(D7) DC(C22):DG(D6) DT(C23):DA(D5) DA(C24):DT(D4) DC(C25):DG(D3) DC(C26):DG(D2) chainA (126) ASN126 0 0 0 0 0 0 14 2 34 0 0 0 0 0 0 (128) ARG128 0 0 0 0 1 4 18 0 0 0 0 0 0 0 0 (178) PHE178 0 0 0 0 0 0 0 13 6 0 0 0 0 0 0 (179) ARG179 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 prot.sequence mkynveekgtkvivrgiadfnlketfesgqcfrwneeedgsytgvaydrvvnvklegdtliidntnltdfydiwfdyfdlgrdygqikeslskdpvlkeaikfgqgirilrqdtwetlvsfivsQNNRipqikkvienlatsfgnpieykgkiyytfpkpeelvmydvetiaktrcgFRakYifdaaskvfsgeinllklheystseirdilmtingvgpkvadcvilysigrydtfptdvwikrivehlylkregtpveiqlfaidkfgdlsgfaqqylfyygremgk >4ejz_A:DNA-glycosylase;TATA-box_binding_protein-like; title=STRUCTURE OF MBOGG1 IN COMPLEX WITH LOW AFFINITY DNA LIGAND organism=Thermoanaerobacter tengcongensis DNA sequence DG(D2):DC(C26) DG(D3):DC(C25) DT(D4):DA(C24) DA(D5):DT(C23) DG(D6):DC(C22) DA(D7):DT(C21) DC(D8):DG(C20) DT(D9):3DR(C19) DT(D10):DA(C18) DG(D11):DC(C17) DG(D12):DC(C16) DA(D13):DT(C15) DC(D14):DG(C14) DG(D15):DC(C13) DC(D16):DG(C12) chainA (125) GLN125 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (126) ASN126 0 0 0 0 0 0 50 3 9 0 0 0 0 0 0 (128) ARG128 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 (178) PHE178 0 0 0 0 0 0 20 16 0 0 0 0 0 0 0 (179) ARG179 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 prot.sequence mkynveekgtkvivrgiadfnlketfesgqcfrwneeedgsytgvaydrvvnvklegdtliidntnltdfydiwfdyfdlgrdygqikeslskdpvlkeaikfgqgirilrqdtwetlvsfivsQNnRipqikkvienlatsfgnpieykgkiyytfpkpeelvmydvetiaktrcgFRakyifdaaskvfsgeinllklheystseirdilmtingvgpkvadcvilysigrydtfptdvwikrivehlylkregtpveiqlfaidkfgdlsgfaqqylfyygremgk >4elt_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=SNAPSHOT OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS PROCESSING MODIFIED PYRIMIDINES organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (247) LYS540 0 0 0 0 0 0 0 5 5 1 0 (280) ARG573 0 0 0 0 0 0 0 0 0 0 3 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 (290) ASN583 0 0 0 0 0 0 0 0 0 9 0 (294) ARG587 0 0 0 0 0 0 0 0 0 0 1 (491) HIS784 0 0 0 0 0 0 0 0 0 0 1 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvRtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4elu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=SNAPSHOT OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS PROCESSING MODIFIED PYRIMIDINES organism=Thermus aquaticus DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 1 5 4 0 0 0 0 0 0 0 (280) ARG573 4 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 1 10 1 0 0 0 0 0 0 0 0 (294) ARG587 7 0 0 0 0 0 0 0 0 0 0 (461) GLN754 1 0 0 0 0 0 0 0 0 0 0 (491) HIS784 1 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvRtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4elv_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=SNAPSHOT OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS PROCESSING MODIFIED PYRIMIDINES organism=THERMUS AQUATICUS DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 5 4 0 0 0 0 0 0 0 (280) ARG573 4 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 1 11 1 0 0 0 0 0 0 0 0 (491) HIS784 2 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4enj_A:Methylated_DNA-protein_cysteine_methyltransferase,_C-terminal_domain; title=CRYSTAL STRUCTURE OF S. POMBE ATL1 IN COMPLEX WITH DAMAGED DNA CONTAINING O6-HYDROXYETHYLGUANINE organism=Schizosaccharomyces pombe DNA sequence DT(C15):DA(B13) DA(C16):DT(B12) DC(C17):DG(B11) DT(C18):DA(B10) DA(C19):DT(B9) DG(C20):DC(B8) DC(C21):DG(B6) DC(C22):DT(B5) DA(C23):DA(B4) DT(C24):DC(B3) DG(C25):DC(B2) DG(C26):DG(B1) chainA ( 39) ARG39 0 0 0 0 0 27 37 7 0 0 0 0 ( 40) GLN40 0 0 0 0 0 0 0 3 2 0 0 0 prot.sequence mrmdefytkvydavceipygkvstygeiaryvgmpsyaRQvgqamkhlhpethvpwhrvinsrgtiskrdisageqrqkdrleeegveiyqtslgeyklnlpeymwkp >4enk_A:Methylated_DNA-protein_cysteine_methyltransferase,_C-terminal_domain; title=CRYSTAL STRUCTURE OF S. POMBE ATL1 IN COMPLEX WITH DAMAGED DNA CONTAINING O6-PROPYLGUANINE organism=Schizosaccharomyces pombe DNA sequence DG(B1):DG(C26) DC(B2):DG(C25) DC(B3):DT(C24) DA(B4):DA(C23) DT(B5):DC(C22) DG(B6):DC(C21) DC(B8):DG(C20) DT(B9):DA(C19) DA(B10):DT(C18) DG(B11):DC(C17) DT(B12):DA(C16) DA(B13):DT(C15) chainA ( 39) ARG39 0 0 0 0 3 36 31 0 0 0 0 0 ( 40) GLN40 0 0 0 0 3 0 0 0 0 0 0 0 ( 43) GLN43 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence mrmdefytkvydavceipygkvstygeiaryvgmpsyaRQvgQamkhlhpethvpwhrvinsrgtiskrdisageqrqkdrleeegveiyqtslgeyklnlpeymwkp >4enm_A:Methylated_DNA-protein_cysteine_methyltransferase,_C-terminal_domain; title=CRYSTAL STRUCTURE OF S. POMBE ATL1 IN COMPLEX WITH DAMAGED DNA CONTAINING O6-BENZYLGUANINE organism=Schizosaccharomyces pombe DNA sequence DT(C15):DA(B13) DA(C16):DT(B12) DC(C17):DG(B11) DT(C18):DA(B10) DA(C19):DT(B9) DG(C20):DC(B8) DC(C21):BZG(B7) DC(C22):DG(B6) DA(C23):DT(B5) DT(C24):DA(B4) DG(C25):DC(B3) DG(C26):DC(B2) chainA ( 25) TYR25 0 0 0 0 0 0 12 0 0 0 0 0 ( 39) ARG39 0 0 0 0 0 56 13 38 0 0 0 0 ( 40) GLN40 0 0 0 0 0 0 0 4 1 0 0 0 ( 43) GLN43 0 0 0 0 0 0 0 1 4 0 0 0 ( 45) MET45 0 0 0 0 0 0 13 0 0 0 0 0 ( 46) LYS46 0 0 0 0 0 0 3 0 0 0 0 0 ( 50) PRO50 0 0 0 0 0 0 5 0 0 0 0 0 ( 56) TRP56 0 0 0 0 0 0 26 0 0 0 0 0 ( 59) VAL59 0 0 0 0 0 0 2 0 0 0 0 0 ( 69) ARG69 0 0 0 0 0 0 27 0 0 0 0 0 ( 77) ARG77 0 0 0 0 0 0 4 0 0 0 0 0 ( 78) GLN78 0 0 0 0 0 0 3 0 0 0 0 0 prot.sequence mrmdefytkvydavceipygkvstygeiaryvgmpsyaRQvgQamkhlhpethvpwhrvinsrgtiskrdisageqrqkdrleeegveiyqtslgeyklnlpeymwkp >4eot_A:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF THE MAFA HOMODIMER BOUND TO THE CONSENSUS MARE organism=Homo sapiens DNA sequence DC(D2):DG(C19) DC(D3):DG(C18) DT(D4):DA(C17) DG(D5):DC(C16) DC(D6):DG(C15) DT(D7):DA(C14) DG(D8):DC(C13) DA(D9):DT(C12) DC(D10):DG(C11) DT(D11):DA(C10) DC(D12):DG(C9) DA(D13):DT(C8) DG(D14):DC(C7) DC(D15):DG(C6) DA(D16):DT(C5) DC(D17):DG(C4) DC(D18):DG(C3) DG(D19):DC(C2) chainA ( 35) ARG260 0 0 0 0 0 0 0 0 0 0 0 0 6 14 15 0 0 0 ( 39) ASN264 0 0 0 0 0 0 0 0 0 0 4 3 5 0 0 0 0 0 ( 42) TYR267 0 0 0 0 0 0 0 0 0 0 0 1 9 9 0 0 0 0 ( 43) ALA268 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 47) ARG272 0 0 0 0 0 0 0 10 9 2 0 0 0 0 0 0 0 0 prot.sequence rfsddqlvsmsvrelnrqlrgfskeevirlkqkrRtlkNrgYAqscRfkrvqqrhilesekcqlqsqveqlklevgrlakerdlykekyekl >4eot_AB:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF THE MAFA HOMODIMER BOUND TO THE CONSENSUS MARE organism=Homo sapiens DNA sequence DC(D2):DG(C19) DC(D3):DG(C18) DT(D4):DA(C17) DG(D5):DC(C16) DC(D6):DG(C15) DT(D7):DA(C14) DG(D8):DC(C13) DA(D9):DT(C12) DC(D10):DG(C11) DT(D11):DA(C10) DC(D12):DG(C9) DA(D13):DT(C8) DG(D14):DC(C7) DC(D15):DG(C6) DA(D16):DT(C5) DC(D17):DG(C4) DC(D18):DG(C3) DG(D19):DC(C2) chainA ( 35) ARG260 0 0 0 0 0 0 0 0 0 0 0 0 6 14 15 0 0 0 ( 39) ASN264 0 0 0 0 0 0 0 0 0 0 4 3 5 0 0 0 0 0 ( 42) TYR267 0 0 0 0 0 0 0 0 0 0 0 1 9 9 0 0 0 0 ( 43) ALA268 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 47) ARG272 0 0 0 0 0 0 0 10 9 2 0 0 0 0 0 0 0 0 chainB ( 34) ARG260 0 0 13 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ASN264 0 0 0 0 5 1 1 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR267 0 0 0 9 9 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA268 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 45) CYS271 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG272 0 0 0 0 0 0 0 4 11 11 0 0 0 0 0 0 0 0 prot.sequence rfsddqlvsmsvrelnrqlrgfskeevirlkqkrRtlkNrgYAqscRfkrvqqrhilesekcqlqsqveqlklevgrlakerdlykekyekl/fsddqlvsmsvrelnrqlrgfskeevirlkqkrRtlkNrgYAqsCRfkrvqqrhilesekcqlqsqveqlklevgrlakerdlykekyekla >4er8_A:Transposase_IS200-like; title=STRUCTURE OF THE REP ASSOCIATES TYROSINE TRANSPOSASE BOUND TO A REP HAIRPIN organism=Escherichia coli DNA sequence DC(B7):DG(B32) DG(B8):DC(B31) DG(B9):DC(B30) DA(B10):DT(B29) DT(B11):DA(B28) DA(B12):DC(B27) DA(B13):DG(B26) DG(B14):DC(B25) DG(B15):DC(B24) DC(B16):DG(B23) DG(B17):DC(B22) DT(B18):DA(B21) chainA ( 78) ARG78 0 0 0 5 9 0 0 0 0 0 0 0 ( 82) LYS82 0 0 0 0 3 12 0 0 0 0 0 0 ( 97) ARG97 7 9 0 0 0 0 0 0 0 0 0 0 prot.sequence mseyrryyikggtwfftvnlrnrrsqllttqyqmlrhaiikvkrdrpfeinawvvlpehmhciwtlpegdddfssrwReikKqfthacglkniwqpRfwehairntkdyrhhvdyiyinpvkhgwvkqvsdwpfstfhrdvarglypidwagdvtdfsageriis >4esj_A:Zinc_beta-ribbon; title=RESTRICTION ENDONUCLEASE DPNI IN COMPLEX WITH TARGET DNA organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(D1):DG(C10) DT(D2):DA(C9) DG(D3):DC(C8) DG(D4):DC(C7) 6MA(D5):DT(C6) DT(D6):6MA(C5) DC(D7):DG(C4) DC(D8):DG(C3) DA(D9):DT(C2) DG(D10):DC(C1) chainA (177) SER185 0 0 2 0 0 0 0 0 0 0 (215) ASN223 0 0 0 2 0 0 0 0 0 0 (217) HIS225 0 0 0 0 4 4 0 0 0 0 (220) GLU228 0 0 0 0 1 11 0 0 0 0 (221) LYS229 0 0 2 9 1 0 0 0 0 0 (223) ARG231 0 0 0 0 0 2 17 18 0 0 (224) GLN232 0 0 0 5 12 1 0 0 0 0 (227) GLN235 0 0 0 0 1 9 4 0 0 0 prot.sequence phmelhfnlelvetyksnsqkariltedwvyrqsycpncgnnplnhfpvadfycnhcseefelkskkgnfsstindgayatmmkrvqadnnpnfffltytknfevnnflvlpkqfvtpksiiqrkplagwigcnidlsqvpskgriflvqdgqvrdpekvtkefkqglflrksslsSrgwtieilncidkiegseftledmyrfesdlknifvkNnHikEKiRQqlQilrdkeiiefkgrgkyrkl >4esv_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases;N-terminal_domain_of_DnaB_helicase; title=A NEW TWIST ON THE TRANSLOCATION MECHANISM OF HELICASES FROM THE STRUCTURE OF DNAB WITH ITS SUBSTRATES organism=Geobacillus stearothermophilus DNA sequence DT(V1) DT(V2) DT(V3) DT(V4) DT(V5) DT(V6) DT(V7) DT(V8) DT(V9) DT(V10) DT(V11) DT(V12) DT(V13) DT(V14) chainA (311) ASN334 10 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (327) ASN334 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (358) ARG365 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainC (327) ASN334 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (329) GLN336 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainD (324) ASN334 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (326) GLN336 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainE (311) ASN334 0 0 0 1 3 0 0 0 0 0 0 0 0 0 (313) GLN336 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainF (314) ASN334 0 3 7 0 0 0 0 0 0 0 0 0 0 0 (316) GLN336 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence serippqsieaeqavlgavfldpaalvpaseilipedfyraahqkifhamlrvadrgepvdlvtvtaelaaseqleeiggvsylseladavptaanveyyariveeksvlrrlirtatsiaqdgytredeidvlldeadrkimevsqfknikdilvqtyitgiptgfteldrmtsgfqrsdliivaarpsvgktafalniaqnvatktnenvaifslemsaqqlvmrmlcaegninaqnlrtgkltpedwgkltmamgslsnagiyiddtpsirvsdirakcrrlkqesglgmividylqliqgsgrskeNrqqevseisrslkalarelevpvialsqlsrsveqrqdkrpmmsdiresgsieqdadivaflyrddyynkdsenkniieiiiakqrngpvgtvqlafikeynkfvnl/serippqsieaeqavlgavfldpaalvpaseilipedfyraahqkifhamlrvadrgepvdlvtvtaelaaseqleeiggvsylseladavptaanveyyariveeksvlrrlirtatsiaqdgytredeidvlldeadrkimevsqrkhsgafknikdilvqtydniemlhngeitgiptgfteldrmtsgfqrsdliivaarpsvgktafalniaqnvatktnenvaifslemsaqqlvmrmlcaegninaqnlrtgkltpedwgkltmamgslsnagiyiddtpsirvsdirakcrrlkqesglgmividylqliqgsgrskeNrqqevseisrslkalarelevpvialsqlsRrpmmsdiresgsieqdadivaflyrddyynkdsenkniieiiiakqrngpvgtvqlafikeynkfvnlerrf/rippqsieaeqavlgavfldpaalvpaseilipedfyraahqkifhamlrvadrgepvdlvtvtaelaaseqleeiggvsylseladavptaanveyyariveeksvlrrlirtatsiaqdgytredeidvlldeadrkimevsqrkhsgafknikdilvqtydniemlhnrdgeitgiptgfteldrmtsgfqrsdliivaarpsvgktafalniaqnvatktnenvaifslemsaqqlvmrmlcaegninaqnlrtgkltpedwgkltmamgslsnagiyiddtpsirvsdirakcrrlkqesglgmividylqliqgsgrskeNrQqevseisrslkalarelevpvialsqlsrsveqrqdkrpmmsdiresgsieqdadivaflyrddyynkdsenkniieiiiakqrngpvgtvqlafikeynkfvnl/rippqsieaeqavlgavfldpaalvpaseilipedfyraahqkifhamlrvadrgepvdlvtvtaelaaseqleeiggvsylseladavptaanveyyariveeksvlrrlirtatsiaqdgytredeidvlldeadrkimevsqrkhafknikdilvqtydniemlhnrdgitgiptgfteldrmtsgfqrsdliivaarpsvgktafalniaqnvatktnenvaifslemsaqqlvmrmlcaegninaqnlrtgkltpedwgkltmamgslsnagiyiddtpsirvsdirakcrrlkqesglgmividylqliqgsgrskeNrQqevseisrslkalarelevpvialsqlsrsveqrqdkrpmmsdiresgsieqdadivaflyrddyynkdsenkniieiiiakqrngpvgtvqlafikeynkfvnl/sieaeqavlgavfldpaalvpaseilipedfyraahqkifhamlrvadrgepvdlvtvtaelaaseqleeiggvsylseladavptaanveyyariveeksvlrrlirtatsiaqdgytredeidvlldeadrkimegafknikdilvqtydniemlhnitgiptgfteldrmtsgfqrsdliivaarpsvgktafalniaqnvatktnenvaifslemsaqqlvmrmlcaegninaqnlrtgkltpedwgkltmamgslsnagiyiddtpsirvsdirakcrrlkqesglgmividylqliqgsgrskeNrQqevseisrslkalarelevpvialsqlsrsveqrqdkrpmmsdiresgsieqdadivaflyrddyynkdsenkniieiiiakqrngpvgtvqlafikeynkfvnl/ippqsieaeqavlgavfldpaalvpaseilipedfyraahqkifhamlrvadrgepvdlvtvtaelaaseqleeiggvsylseladavptaanveyyariveeksvlrrlirtatsiaqdgytredeidvlldeadrkimevsafknikdilvqtydniemlitgiptgfteldrmtsgfqrsdliivaarpsvgktafalniaqnvatktnenvaifslemsaqqlvmrmlcaegninaqnlrtgkltpedwgkltmamgslsnagiyiddtpsirvsdirakcrrlkqesglgmividylqliqgsgrskeNrQqevseisrslkalarelevpvialsqlsrsveqrqdkrpmmsdiresgsieqdadivaflyrddyynkdsenkniieiiiakqrngpvgtvqlafikeynkfvnl >4esv_GHIJKL:P-loop_containing_nucleoside_triphosphate_hydrolases;N-terminal_domain_of_DnaB_helicase; title=A NEW TWIST ON THE TRANSLOCATION MECHANISM OF HELICASES FROM THE STRUCTURE OF DNAB WITH ITS SUBSTRATES organism=Geobacillus stearothermophilus DNA sequence DT(W1) DT(W2) DT(W3) DT(W4) DT(W5) DT(W6) DT(W7) DT(W8) DT(W9) DT(W10) DT(W11) DT(W12) DT(W13) chainG chainH (316) GLN336 0 0 0 0 0 0 0 0 0 1 0 0 0 chainI chainJ (309) ASN334 0 0 0 0 0 2 0 0 0 0 0 0 0 chainK (314) ASN334 0 0 0 1 0 0 0 0 0 0 0 0 0 chainL (312) ASN334 4 6 0 0 0 0 0 0 0 0 0 0 0 (314) GLN336 0 1 0 0 0 0 0 0 0 0 0 0 0 (349) GLN371 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence rippqsieaeqavlgavfldpaalvpaseilipedfyraahqkifhamlrvadrgepvdlvtvtaelaaseqleeiggvsylseladavptaanveyyariveeksvlrrlirtatsiaqdgytredeidvlldeadrkimevsfknikdilvqtydniemlitgiptgfteldrmtsgfqrsdliivaarpsvgktafalniaqnvatktnenvaifslemsaqqlvmrmlcaegninaqnlrtgkltpedwgkltmamgslsnagiyiddtpsirvsdirakcrrlkqesglgmividylqliqgsgrskenrqqevseisrslkalarelevpvialsqlsrsveqrqdkrpmmsdiresgsieqdadivaflyrddyynkdsenkniieiiiakqrngpvgtvqlafikeynkfvnl/ippqsieaeqavlgavfldpaalvpaseilipedfyraahqkifhamlrvadrgepvdlvtvtaelaaseqleeiggvsylseladavptaanveyyariveeksvlrrlirtatsiaqdgytredeidvlldeadrkimefknikdilvqtydniemlhnritgiptgfteldrmtsgfqrsdliivaarpsvgktafalniaqnvatktnenvaifslemsaqqlvmrmlcaegninaqnlrtgkltpedwgkltmamgslsnagiyiddtpsirvsdirakcrrlkqesglgmividylqliqgsgrskenrQqevseisrslkalarelevpvialsqlsrsveqrqdkrpmmsdiresgsieqdadivaflyrddyynkdsenkniieiiiakqrngpvgtvqlafikeynkfvnlerrf/ippqsieaeqavlgavfldpaalvpaseilipedfyraahqkifhamlrvadrgepvdlvtvtaelaaseqleeiggvsylseladavptaanveyyariveeksvlrrlirtatsiaqdgytredeidvlldeadrkimefknikdilvqtydniemlitgiptgfteldrmtsgfqrsdliivaarpsvgktafalniaqnvatktnenvaifslemsaqqlvmrmlcaegninaqnlrtgkltpedwgkltmamgslsnagiyiddtpsirvsdirakcrrlkqesglgmividylqliqgsgrskenrqqeVseisrslkalarelevpvialsqlsrsveqrqdkrpmmsdiresgsieqdadivaflyrddyynkdsenkniieiiiakqrngpvgtvqlafikeynkfvnl/ieaeqavlgavfldpaalvpaseilipedfyraahqkifhamlrvadrgepvdlvtvtaelaaseqleeiggvsylseladavptaanveyyariveeksvlrrlirtatsiaqdgytredeidvlldeadrkimevsqfknikdilvqtydniemlitgiptgfteldrmtsgfqrsdliivaarpsvgktafalniaqnvatktnenvaifslemsaqqlvmrmlcaegninaqnlrtgkltpedwgkltmamgslsnagiyiddtpsirvsdirakcrrlkqesglgmividylqliqgsgrskeNrqqevseisrslkalarelevpvialsqlsrsveqrqdkrpmmsdiresgsieqdadivaflyrddyynkdsenkniieiiiakqrngpvgtvqlafikeynkfvnl/rippqsieaeqavlgavfldpaalvpaseilipedfyraahqkifhamlrvadrgepvdlvtvtaelaaseqleeiggvsylseladavptaanveyyariveeksvlrrlirtatsiaqdgytredeidvlldeadrkimegafknikdilvqtydniemlitgiptgfteldrmtsgfqrsdliivaarpsvgktafalniaqnvatktnenvaifslemsaqqlvmrmlcaegninaqnlrtgkltpedwgkltmamgslsnagiyiddtpsirvsdirakcrrlkqesglgmividylqliqgsgrskeNrqqevseisrslkalarelevpvialsqlsrsveqrqdkrpmmsdiresgsieqdadivaflyrddyynkdsenkniieiiiakqrngpvgtvqlafikeynkfvnl/ppqsieaeqavlgavfldpaalvpaseilipedfyraahqkifhamlrvadrgepvdlvtvtaelaaseqleeiggvsylseladavptaanveyyariveeksvlrrlirtatsiaqdgytredeidvlldeadrkimevafknikdilvqtydniemlitgiptgfteldrmtsgfqrsdliivaarpsvgktafalniaqnvatktnenvaifslemsaqqlvmrmlcaegninaqnlrtgkltpedwgkltmamgslsnagiyiddtpsirvsdirakcrrlkqesglgmividylqliqgsgrskeNrQqevseisrslkalarelevpvialsqlsrsveqrQdkrpmmsdiresgsieqdadivaflyrddyynkdsenkniieiiiakqrngpvgtvqlafikeynkfvnl >4esv_L:P-loop_containing_nucleoside_triphosphate_hydrolases;N-terminal_domain_of_DnaB_helicase; title=A NEW TWIST ON THE TRANSLOCATION MECHANISM OF HELICASES FROM THE STRUCTURE OF DNAB WITH ITS SUBSTRATES organism=Geobacillus stearothermophilus DNA sequence DT(W1) DT(W2) DT(W3) DT(W4) DT(W5) DT(W6) DT(W7) DT(W8) DT(W9) DT(W10) DT(W11) DT(W12) DT(W13) chainL (312) ASN334 4 6 0 0 0 0 0 0 0 0 0 0 0 (314) GLN336 0 1 0 0 0 0 0 0 0 0 0 0 0 (349) GLN371 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence ppqsieaeqavlgavfldpaalvpaseilipedfyraahqkifhamlrvadrgepvdlvtvtaelaaseqleeiggvsylseladavptaanveyyariveeksvlrrlirtatsiaqdgytredeidvlldeadrkimevafknikdilvqtydniemlitgiptgfteldrmtsgfqrsdliivaarpsvgktafalniaqnvatktnenvaifslemsaqqlvmrmlcaegninaqnlrtgkltpedwgkltmamgslsnagiyiddtpsirvsdirakcrrlkqesglgmividylqliqgsgrskeNrQqevseisrslkalarelevpvialsqlsrsveqrQdkrpmmsdiresgsieqdadivaflyrddyynkdsenkniieiiiakqrngpvgtvqlafikeynkfvnl >4euw_A:HMG-box; title=CRYSTAL STRUCTURE OF A HMG DOMAIN OF TRANSCRIPTION FACTOR SOX-9 BOUND TO DNA (SOX-9/DNA) FROM HOMO SAPIENS AT 2.77 A RESOLUTION organism=HOMO SAPIENS DNA sequence DC(B1):DG(C12) DT(B2):DA(C11) DC(B3):DG(C10) DT(B4):DA(C9) DT(B5):DA(C8) DT(B6):DA(C7) DG(B7):DC(C6) DA(B8):DT(C5) DG(B9):DC(C4) DA(B10):DT(C3) DA(B11):DT(C2) DG(B12):DC(C1) chainA ( 5) ARG107 0 0 0 0 0 0 10 8 0 0 0 0 ( 8) ASN110 0 0 0 0 0 5 6 0 0 0 0 0 ( 10) PHE112 0 0 0 0 3 5 0 0 0 0 0 0 ( 11) MET113 0 0 0 0 17 13 0 0 0 0 0 0 ( 18) ARG120 0 0 0 7 5 0 0 0 0 0 0 0 ( 29) HIS131 0 3 6 0 0 0 0 0 0 0 0 0 ( 30) ASN132 0 0 7 6 0 0 0 0 0 0 0 0 ( 31) ALA133 0 0 1 2 0 0 0 0 0 0 0 0 ( 34) SER136 0 0 0 8 9 0 0 0 0 0 0 0 ( 72) TYR174 0 0 0 0 0 0 0 8 2 0 0 0 prot.sequence phvkRpmNaFMvwaqaaRrkladqyphlHNAelSktlgklwrllnesekrpfveeaerlrvqhkkdhpdykY >4evv_A:DNA-glycosylase; title=MOUSE MBD4 GLYCOSYLASE DOMAIN IN COMPLEX WITH A G:T MISMATCH organism=Mus musculus DNA sequence DT(B1):DA(C22) DC(B2):DG(C21) DA(B3):DT(C20) DG(B4):DC(C19) DC(B5):DG(C18) DG(B6):DT(C17) DC(B7):DG(C16) DA(B8):DT(C15) DT(B9):DA(C14) DG(B10):DC(C13) DG(B11):DC(C12) chainA ( 12) LEU421 0 0 0 0 0 6 0 0 0 0 0 ( 13) VAL422 0 0 0 0 0 4 0 0 0 0 0 ( 14) GLN423 0 0 0 0 0 11 0 0 0 0 0 ( 31) LEU440 0 0 0 0 0 12 0 0 0 0 0 ( 32) ASN441 0 0 0 0 4 0 0 0 0 0 0 ( 33) ARG442 0 0 0 0 34 4 8 1 0 0 0 ( 34) THR443 0 0 0 0 0 4 0 0 0 0 0 ( 73) LEU482 0 0 0 0 8 24 0 0 0 0 0 ( 76) LEU485 0 0 0 0 2 0 0 0 0 0 0 (105) TYR514 0 0 0 0 0 8 0 0 0 0 0 (125) ASN534 0 0 0 0 0 1 0 0 0 0 0 (127) LYS536 0 0 0 0 0 12 0 0 0 0 0 prot.sequence mkwtpprspfnLVQeilfhdpwklliatifLNRTsgkmaipvlweflekypsaevaraadwrdvsellkplgLydLraktiikfsdeyltkqwrypielhgigkYgndsyrifcvnewkqvhpeNhKlnkyhdwlwenheklsls >4ew0_A:DNA-glycosylase; title=MOUSE MBD4 GLYCOSYLASE DOMAIN IN COMPLEX WITH A G:5HMU (5- HYDROXYMETHYLURACIL) MISMATCH organism=Mus musculus DNA sequence DC(C12):DG(B11) DC(C13):DG(B10) DA(C14):DT(B9) DT(C15):DA(B8) DG(C16):DC(B7) DG(C18):DG(B6) DC(C19):DC(B5) DT(C20):DG(B4) DG(C21):DA(B3) DA(C22):DC(B2) chainA ( 30) ASN441 0 0 0 0 0 2 0 0 0 0 ( 31) ARG442 0 0 0 1 8 21 0 0 0 0 ( 32) THR443 0 0 0 0 0 5 0 0 0 0 ( 71) LEU482 0 0 0 0 0 26 5 0 0 0 ( 74) LEU485 0 0 0 0 0 0 2 0 0 0 ( 75) ARG486 0 0 0 0 0 1 0 0 0 0 prot.sequence wtpprspfnlvqeilfhdpwklliatiflNRTsgkmaipvlweflekypsaevaraadwrdvsellkplgLydLRaktiikfsdeyltkqwrypielhgigkygndsyrifcvnewkqvhpenhklnkyhdwlwenheklsls >4ew4_A:DNA-glycosylase; title=MOUSE MBD4 GLYCOSYLASE DOMAIN IN COMPLEX WITH DNA CONTAINING A RIBOSE SUGAR organism=Mus musculus DNA sequence DT(B1):DA(C22) DC(B2):DG(C21) DA(B3):DT(C20) DG(B4):DC(C19) DC(B5):DG(C18) DG(B6):3DR(C17) DC(B7):DG(C16) DA(B8):DT(C15) DT(B9):DA(C14) DG(B10):DC(C13) DG(B11):DC(C12) chainA ( 31) ASN441 0 0 0 0 6 0 0 0 0 0 0 ( 32) ARG442 0 0 0 0 34 8 11 0 0 0 0 ( 33) THR443 0 0 0 0 0 3 0 0 0 0 0 ( 72) LEU482 0 0 0 0 8 24 0 0 0 0 0 prot.sequence kwtpprspfnlvqeilfhdpwklliatiflNRTsgkmaipvlweflekypsaevaraadwrdvsellkplgLydlraktiikfsdeyltkqwrypielhgigkygndsyrifcvnewkqvhpedhklnkyhdwlwenhekls >4eyh_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE IOTA INCORPORATING DCTP OPPOSITE N- (DEOXYGUANOSIN-8-YL)-1-AMINOPYRENE LESION organism=Homo sapiens DNA sequence DG(T841):DC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainB ( 98) LEU123 0 1 0 0 0 0 0 (280) GLU305 5 4 0 0 0 0 0 (329) GLN361 0 0 0 0 0 0 2 prot.sequence ssrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverLgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirrgresrQcpipshviqkydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >4eyi_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE IOTA INCORPORATING DATP OPPOSITE N- (DEOXYGUANOSIN-8-YL)-1-AMINOPYRENE LESION organism=Homo sapiens DNA sequence DG(T841):DC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainB (280) GLU305 1 2 0 0 0 0 0 (325) ARG357 1 0 0 0 0 0 0 (329) GLN361 0 0 0 0 0 0 1 prot.sequence ssrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirryResrQcpipshviqkdvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlkal >4ez6_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=BACILLUS DNA POLYMERASE I LARGE FRAGMENT COMPLEX 1 organism=Geobacillus kaustophilus DNA sequence DC(E21):DG(F12) DC(E22):DG(F11) DT(E23):DA(F10) DG(E24):DC(F9) DA(E25):DT(F8) DC(E26):DG(F7) DT(E27):DA(F6) DC(E28):DG(F5) DDG(E29):DC(F4) DG3(D901):DG(F3) chainD (286) LYS582 0 0 0 1 6 7 0 0 0 0 (319) ARG615 0 0 0 0 0 0 0 4 12 3 (329) ASN625 0 0 0 0 0 3 4 1 0 0 (333) ARG629 0 0 0 0 0 0 0 8 4 0 (357) ASP653 0 0 0 0 0 0 0 0 0 1 (359) SER655 0 0 0 0 0 0 0 0 0 3 (360) GLN656 0 0 0 0 0 0 0 0 0 10 (362) GLU658 0 0 0 0 0 0 0 0 0 13 (386) HIS682 0 0 0 0 0 0 0 0 0 6 (406) ARG702 0 0 0 0 0 0 0 0 0 7 (410) LYS706 0 0 0 0 0 0 0 0 0 8 (411) ALA707 0 0 0 0 0 0 0 0 0 1 (414) TYR710 0 0 0 0 0 0 0 0 0 52 (418) TYR714 0 0 0 0 0 0 0 0 0 9 (420) ILE716 0 0 0 0 0 0 0 0 0 5 (428) ASN724 0 0 0 0 0 0 0 0 0 1 (497) ASN793 0 0 0 0 0 0 0 0 1 1 (501) GLN797 0 0 0 0 0 0 0 1 3 0 (533) HIS829 0 0 0 0 0 0 0 2 0 0 (534) ASP830 0 0 0 0 0 0 0 0 0 1 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnYgivYgIsdyglaqNlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4ez9_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BACILLUS DNA POLYMERASE I LARGE FRAGMENT COMPLEX 2 organism=Geobacillus kaustophilus DNA sequence DG(C5):DC(B28) DA(C6):DT(B27) DG(C7):DC(B26) DT(C8):DA(B25) DC(C9):DG(B24) DA(C10):DT(B23) DG(C11):DC(B22) DG(C12):DC(B21) chainA (285) LYS582 0 0 7 3 0 0 0 0 (318) ARG615 4 0 0 0 0 0 0 0 (328) ASN625 1 4 3 0 0 0 0 0 (500) GLN797 1 0 0 0 0 0 0 0 (532) HIS829 2 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwyda >4f2j_C:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF ZNF217 BOUND TO DNA, P6522 CRYSTAL FORM organism=Homo sapiens DNA sequence DT(A0) DT(A1) DT(A2) DG(A3) DC(A4) DA(A5) DG(A6) DA(A7) DA(A8) DT(A9) DC(A10) DG(A11) DA(A12) DT(A13) DT(A14) DC(A15) DT(A16) DG(A17) DC(A18) DA(A19) chainC ( 11) ARG481 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR484 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR512 0 0 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG515 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence recsycgkffRsnYylnihlrthtgekpykcefceyaaaqkTslRyhlerhh >4f2r_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA POLYMERASE I LARGE FRAGMENT COMPLEX 3 organism=Geobacillus kaustophilus DNA sequence DG(F5):DC(E28) DA(F6):DT(E27) DG(F7):DC(E26) DT(F8):DA(E25) DC(F9):DG(E24) DA(F10):DT(E23) DG(F11):DC(E22) DG(F12):DC(E21) chainD (289) LYS582 0 0 3 7 3 0 0 0 (322) ARG615 4 0 0 0 0 0 0 0 (332) ASN625 1 5 3 0 0 0 0 0 (336) ARG629 4 0 0 0 0 0 0 0 (536) HIS829 2 0 0 0 0 0 0 0 prot.sequence kplakmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4f2s_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA POLYMERASE I LARGE FRAGMENT COMPLEX 4 organism=Geobacillus kaustophilus DNA sequence DC(E21):DG(F12) DC(E22):DG(F11) DT(E23):DA(F10) DG(E24):DC(F9) DA(E25):DT(F8) DC(E26):DG(F7) DT(E27):DA(F6) DC(E28):DG(F5) chainD (289) LYS582 0 0 0 3 5 4 0 0 (322) ARG615 0 0 0 0 0 0 0 4 (332) ASN625 0 0 0 0 0 3 4 1 (536) HIS829 0 0 0 0 0 0 0 2 prot.sequence kplakmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4f3o_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA POLYMERASE I LARGE FRAGMENT COMPLEX 5 organism=Geobacillus kaustophilus DNA sequence DG(C5):DC(B28) DA(C6):DT(B27) DG(C7):DC(B26) DT(C8):DA(B25) DC(C9):DG(B24) DA(C10):DT(B23) DG(C11):DC(B22) DG(C12):DC(B21) chainA (286) LYS582 0 0 7 5 1 0 0 0 (319) ARG615 4 0 0 0 0 0 0 0 (329) ASN625 1 4 3 0 0 0 0 0 (488) GLN797 1 0 0 0 0 0 0 0 (520) HIS829 2 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktanmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwyda >4f41_A:DNA_breaking-rejoining_enzymes; title=PROTELOMERASE TELA MUTANT R255A COMPLEXED WITH CTTG HAIRPIN DNA organism=AGROBACTERIUM TUMEFACIENS DNA sequence DC(C1):DG(C32) DA(C2):DT(C31) DT(C3):DA(C30) DA(C4):DT(C29) DA(C5):DT(C28) DT(C6):DA(C27) DA(C7):DT(C26) DA(C8):DT(C25) DC(C9):DG(C24) DA(C10):DT(C23) DA(C11):DT(C22) DT(C12):DA(C21) DA(C13):DT(C20) DT(C14):DA(C19) DC(C15):DG(C18) chainA ( 22) ALA124 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 ( 24) ARG126 0 0 0 0 4 11 4 1 0 0 0 0 0 0 0 ( 65) THR167 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 ( 66) THR168 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 68) ILE170 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 69) SER171 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 ( 70) TYR172 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 72) THR174 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 99) TYR201 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 (103) ARG205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (106) LYS208 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 (184) LYS286 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 (186) LYS288 0 0 0 0 0 0 0 0 0 0 0 0 3 1 4 (229) ILE331 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (233) SER335 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (237) ARG339 0 0 0 0 0 0 0 1 2 5 0 0 0 0 0 (238) LEU340 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 (241) ARG343 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 (299) THR401 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence ypktgvatsivekieraefntAgRkptvllriadfiaamngmdakqdmqalwdaeiaimngraqTTiISYiTkyrnaireafgddhpmlkiatgdaamYdeaRrvKmekiankhgalitfenyrqvlkicedclkssdplmigigligmtgrapyevftqaefspapygkgvskwsilfngqaKtKqgegtkfgityeipvltrsetvlaaykrlresgqgklwhgmsIddfSsetRLllRdtvfnlfedvwpkeelpkpyglrhlyaevayhnfapphvtknsyfaailghnnndleTslsymtytlpedrdnalarl >4f43_A:DNA_breaking-rejoining_enzymes; title=PROTELOMERASE TELA MUTANT R255A COMPLEXED WITH CAAG HAIRPIN DNA organism=AGROBACTERIUM TUMEFACIENS DNA sequence DC(C1):DG(C32) DA(C2):DT(C31) DT(C3):DA(C30) DA(C4):DT(C29) DA(C5):DT(C28) DT(C6):DA(C27) DA(C7):DT(C26) DA(C8):DT(C25) DC(C9):DG(C24) DA(C10):DT(C23) DA(C11):DT(C22) DT(C12):DA(C21) DA(C13):DT(C20) DT(C14):DA(C19) DC(C15):DG(C18) chainA ( 23) ALA124 0 0 3 4 1 0 0 0 0 0 0 0 0 0 0 ( 25) ARG126 0 0 0 0 4 14 5 1 0 0 0 0 0 0 0 ( 66) THR167 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 ( 67) THR168 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 69) ILE170 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 70) SER171 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 ( 71) TYR172 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 73) THR174 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (100) TYR201 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 (104) ARG205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (107) LYS208 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (185) LYS286 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 (187) LYS288 0 0 0 0 0 0 0 0 0 0 0 0 2 3 4 (230) ILE331 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (234) SER335 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (238) ARG339 0 0 0 0 0 0 0 1 5 4 0 0 0 0 0 (239) LEU340 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 (242) ARG343 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 (300) THR401 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence dypktgvatsivekieraefntAgRkptvllriadfiaamngmdakqdmqalwdaeiaimngraqTTiISYiTkyrnaireafgddhpmlkiatgdaamYdeaRrvKmekiankhgalitfenyrqvlkicedclkssdplmigigligmtgrapyevftqaefspapygkgvskwsilfngqaKtKqgegtkfgityeipvltrsetvlaaykrlresgqgklwhgmsIddfSsetRLllRdtvfnlfedvwpkeelpkpyglrhlyaevayhnfapphvtknsyfaailghnnndleTslsymtytlpedrdnalarl >4f4k_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA POLYMERASE I LARGE FRAGMENT COMPLEX 6 organism=Geobacillus kaustophilus DNA sequence DT(F3):DG3(D901) DC(F4):DDG(E29) DG(F5):DC(E28) DA(F6):DT(E27) DG(F7):DC(E26) DT(F8):DA(E25) DC(F9):DG(E24) DA(F10):DT(E23) DG(F11):DC(E22) DG(F12):DC(E21) chainD (285) LYS582 0 0 0 0 7 6 1 0 0 0 (318) ARG615 0 12 3 0 0 0 0 0 0 0 (328) ASN625 0 0 1 4 3 0 0 0 0 0 (332) ARG629 0 4 8 0 0 0 0 0 0 0 (356) ASP653 1 0 0 0 0 0 0 0 0 0 (358) SER655 2 0 0 0 0 0 0 0 0 0 (359) GLN656 4 0 0 0 0 0 0 0 0 0 (360) ILE657 2 0 0 0 0 0 0 0 0 0 (361) GLU658 1 0 0 0 0 0 0 0 0 0 (385) HIS682 6 0 0 0 0 0 0 0 0 0 (405) ARG702 8 0 0 0 0 0 0 0 0 0 (409) LYS706 14 0 0 0 0 0 0 0 0 0 (410) ALA707 2 0 0 0 0 0 0 0 0 0 (413) TYR710 26 0 0 0 0 0 0 0 0 0 (417) TYR714 10 0 0 0 0 0 0 0 0 0 (419) ILE716 5 0 0 0 0 0 0 0 0 0 (427) ASN724 1 0 0 0 0 0 0 0 0 0 (496) ASN793 1 1 0 0 0 0 0 0 0 0 (500) GLN797 0 3 1 0 0 0 0 0 0 0 (532) HIS829 0 0 1 0 0 0 0 0 0 0 (533) ASP830 7 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnygivYgIsdyglaqNlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4f4w_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=Y-FAMILY DNA POLYMERASE CHIMERA DBH-DPO4-DPO4 #1 organism=? DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DC(P3):DG(T16) DA(P4):DT(T15) DC(P5):DG(T14) DT(P6):DA(T13) DG(P7):DC(T12) DA(P8):DT(T11) DT(P9):DA(T10) DC(P10):DG(T9) DG(P11):DC(T8) DG(P12):DC(T7) DC(P13):DG(T6) chainA (286) HIS286 0 0 0 0 0 0 1 3 0 0 0 0 0 (298) SER298 0 0 0 0 0 0 0 0 2 0 0 0 0 (337) ARG337 0 0 0 0 0 0 0 0 0 12 16 0 0 prot.sequence mivifvdfdyffaqveevlnpqykgkplvvcvysgrtktsgavatanyearklgvkagmpiikamqiapsaiyvpmrkpiyeafsnrimnllnkhadkievasideayldvtnkvegnfengielarkikqeilekekitvtvgvapnkilakiiadkskpnglgvirptevqdflneldideipgigsvlarrlnelgiqklrdilsknynelekitgkakalyllklaqdeynepirtrvrKsigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivSrgrtfphgisketaysesvkllqkileederkirrigvRfsKfi >4f4x_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=Y-FAMILY DNA POLYMERASE CHIMERA DBH-DPO4-DPO4 #2 organism=? DNA sequence DC(T6):DC(P14) DC(T7):DG(P13) DC(T8):DG(P12) DT(T9):DG(P11) DG(T10):DC(P10) DA(T11):DT(P9) DT(T12):DA(P8) DC(T13):DG(P7) DA(T14):DT(P6) DG(T15):DC(P5) DT(T16):DA(P4) DG(T17):DC(P3) DC(T18):DG(P2) DC(T19):DG(P1) chainA (243) ARG243 0 0 0 21 0 0 0 0 0 0 0 0 0 0 (249) ILE249 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (286) HIS286 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (296) ILE296 0 0 0 1 5 0 0 0 0 0 0 0 0 0 (298) SER298 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (337) ARG337 0 0 19 0 12 0 0 0 0 0 0 0 0 0 prot.sequence mivifvdfdyffaqveevlnpqykgkplvvcvysgrtktsgavatanyearklgvkagmpiikamqiapsaiyvpmrKpiyeafsnrimnllnkhadkievasideayldvtnkvegnfengielarkikqeilekekitvtvgvapnkilakiiadkskpnglgvirptevqdflneldideipgigsvlarrlnelgiqklrdilsknynelekitgkakalyllklaqdeynepirtrvRksigrIvtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldIvSrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >4f4y_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=Y-FAMILY DNA POLYMERASE CHIMERA DBH-DPO4-DBH organism=? DNA sequence DG(C1):DC(D19) DG(C2):DC(D18) DC(C3):DG(D17) DA(C4):DT(D16) DC(C5):DG(D15) DT(C6):DA(D14) DG(C7):DC(D13) DA(C8):DT(D12) DT(C9):DA(D11) DC(C10):DG(D10) DG(C11):DT(D9) DG(C12):DC(D8) DG(C13):DC(D7) DC(C14):DC(D6) DC(C15):DG(D5) DC(C16):DC(D4) chainB ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 ( 60) PRO60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (222) LYS222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 (249) TYR249 0 0 0 0 0 0 0 0 0 0 0 2 12 0 0 0 (293) LEU293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (297) SER297 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (333) ARG333 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 prot.sequence mivifvdfdyffaqveevlnpqykgkplvvcVysgrtktsgAvatanyearklgvkagmPiikamqiapsaiyvpmrkpiyeafsnrimnllnkhadkievasideayldvtnkvegnfengielarkikqeilekekitvtvgvapnkilakiiadkskpnglgvirptevqdflneldideipgigsvlarrlnelgiqklrdilsknynelekitgkaKalyllklaqdeynepirtrvrksigrYltlpyntrdvkvilpylkkaineaynkvngipmritviaimedLdilSkgkkfkhgisidnaykvaedllrellvrdkrrnvrRigvkldniii >4f4z_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=Y-FAMILY DNA POLYMERASE CHIMERA DPO4-DPO4-DBH organism=? DNA sequence DA(P2):DT(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DG(P6):DC(T13) DG(P7):DC(T12) DA(P8):DT(T11) DA(P9):DT(T10) DG(P10):DC(T9) DC(P11):DG(T8) DC(P12):DG(T7) DG(P13):DC(T6) chainA ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 7 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 7 (244) SER244 0 0 0 0 0 0 0 1 0 0 0 0 (248) TYR248 0 0 0 0 0 0 0 0 1 3 0 0 (282) ARG282 0 0 0 0 2 0 0 0 0 0 0 0 (332) ARG332 0 0 0 0 0 0 0 0 0 0 2 4 (336) LYS336 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgAvatanyearkfgvkAgipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrYltlpyntrdvkvilpylkkaineaynkvngipmRitviaimedldilSkgkkfkhgisidnaykvaedllrellvrdkrrnvrRigvKldniii >4f50_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=Y-FAMILY DNA POLYMERASE CHIMERA DBH-DBH-DPO4 organism=? DNA sequence DG(T3):DC(P11) DC(T4):DG(P10) DC(T5):DG(P9) DG(T7):DC(P8) DG(T8):DC(P7) DC(T9):DG(P6) DT(T10):DA(P5) DT(T11):DA(P4) DC(T12):DG(P3) DC(T13):DG(P2) DC(T14):DG(P1) chainA ( 52) ALA57 3 0 0 0 0 0 0 0 0 0 0 prot.sequence mivifvdfdyffaqveevlnpqykgkplvvcvyssgavatanyearklgvkAgmpiikamqiapsaiyvpmrkpiyeafsnrimnllnkhadkievasideayldvtnkvegnfengielarkikqeilekekitvtvgvapnkilakiiadkskpnglgvirptevqdflneldideipgigsvlarrlnelgiqklrdilsknynelekitgkakalyllklaqnkysepvenkskiphgrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvrfskfi >4f5n_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=OPEN TERNARY COMPLEX OF R283K DNA POLYMERASE BETA WITH A METAL FREE DCTP ANALOG organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 27) HIS34 0 0 0 0 36 ( 28) LYS35 0 0 0 0 9 ( 31) ALA38 0 0 0 0 4 prot.sequence qetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetkfmgvcqlpsdekeyphrridirlipkdqyycgvlyftgsdifnknmkahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4f5o_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=OPEN TERNARY COMPLEX OF R283K DNA POLYMERASE BETA WITH A ONE METAL BOUND DCTP ANALOG organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 35 0 0 0 0 ( 26) LYS35 8 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpskdekeyphrridirlipkdqyycgvlyftgsdifnknmkahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4f5p_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=OPEN TERNARY MISMATCH COMPLEX OF R283K DNA POLYMERASE BETA WITH A DATP ANALOG organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 36 0 0 0 0 ( 29) LYS35 8 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmkahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4f5q_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CLOSED TERNARY COMPLEX OF R283K DNA POLYMERASE BETA organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 33 ( 26) LYS35 0 0 0 0 9 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpskekeyphrridirlipkdqyycgvlyftgsdifnknmkahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4f5r_B:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=OPEN AND CLOSED TERNARY COMPLEX OF R283K DNA POLYMERASE BETA WITH A DCTP ANALOG IN THE SAME ASYMMETRIC UNIT organism=Homo sapiens DNA sequence DG(C1):DC(F5) DT(C2):DA(F4) DC(C3):DG(F3) DG(C4):DC(F2) DG(C5):DC(F1) chainB ( 25) HIS34 29 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmkahalekgftineytirplageplpvdsekdifdyiqwkyrepkdrse >4f6m_A:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF KAISO ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH KAISO BINDING SITE DNA organism=Homo sapiens DNA sequence DC(E20):DG(D19) DG(E21):DC(D18) DT(E22):DA(D17) DT(E23):DA(D16) DA(E24):DT(D15) DT(E25):DA(D14) DT(E26):DA(D13) DG(E27):DC(D12) DG(E28):DC(D11) DC(E29):DG(D10) DA(E30):DT(D9) DG(E31):DC(D8) DG(E32):DC(D7) DA(E33):DT(D6) DA(E34):DT(D5) DG(E35):DC(D4) DC(E36):DG(D3) DA(E37):DT(D2) DC(E38):DG(D1) chainA ( 26) THR507 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 27) SER508 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 30) ARG511 0 0 0 0 0 0 0 3 6 11 13 0 0 0 0 0 0 0 0 ( 52) LEU533 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 54) GLU535 0 0 0 0 0 0 0 0 2 5 13 4 0 0 0 0 0 0 0 ( 55) TYR536 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 ( 80) ASN561 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 81) TYR562 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 ( 82) GLN563 0 0 0 0 0 0 0 0 0 0 0 5 5 7 1 0 0 0 0 (114) ARG595 0 0 0 0 0 1 9 14 6 0 0 0 0 0 0 0 0 0 0 prot.sequence dhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfpLaEYrtkheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqy >4f6n_A:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF KAISO ZINC FINGER DNA BINDING PROTEIN IN COMPLEX WITH METHYLATED CPG SITE DNA organism=Homo sapiens DNA sequence DG(E21):DC(D18) DT(E22):DA(D17) DA(E23):DT(D16) DT(E24):DA(D15) DA(E25):DT(D14) DG(E26):DC(D13) DA(E27):DT(D12) 5CM(E28):DG(D11) DG(E29):5CM(D10) 5CM(E30):DG(D9) DG(E31):5CM(D8) DG(E32):DC(D7) DT(E33):DA(D6) DG(E34):DC(D5) DA(E35):DT(D4) DC(E36):DG(D3) DA(E37):DT(D2) DC(E38):DG(D1) chainA ( 25) CYS505 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 27) THR507 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 ( 28) SER508 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 31) ARG511 0 0 0 0 0 0 0 7 8 9 12 0 0 0 0 0 0 0 ( 53) LEU533 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 55) GLU535 0 0 0 0 0 0 0 0 1 10 11 3 0 0 0 0 0 0 ( 56) TYR536 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 82) TYR562 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 ( 83) GLN563 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (115) ARG595 0 0 0 0 0 4 8 7 0 0 0 0 0 0 0 0 0 0 (117) TYR597 0 0 0 0 0 0 3 4 3 0 0 0 0 0 0 0 0 0 prot.sequence ddhyelivdgrvyyicivckrsyvcltSlrRhfnihswekkypcrycekvfplaEYrtkheihhtgerryqclacgksfinYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqYayl >4f8r_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BACILLUS DNA POLYMERASE I LARGE FRAGMENT COMPLEX 7 organism=Geobacillus kaustophilus DNA sequence DC(B21):DG(C12) DC(B22):DG(C11) DT(B23):DA(C10) DG(B24):DC(C9) DA(B25):DT(C8) DC(B26):DG(C7) DT(B27):DA(C6) DC(B28):DG(C5) DDG(B29):DC(C4) chainA (285) LYS582 0 0 0 0 4 7 0 0 0 (318) ARG615 0 0 0 0 0 0 0 3 13 (328) ASN625 0 0 0 0 0 3 5 0 0 (332) ARG629 0 0 0 0 0 0 0 7 4 (417) TYR714 0 0 0 0 0 0 0 0 33 (496) ASN793 0 0 0 0 0 0 0 0 2 (500) GLN797 0 0 0 0 0 0 0 0 5 (532) HIS829 0 0 0 0 0 0 0 1 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4fb3_A:Origin_of_replication-binding_domain,_RBD-like; title=POLYOMAVIRUS T-AG BINDS SYMMETRICAL REPEATS AT THE VIRAL ORIGIN IN AN ASYMMETRICAL MANNER organism=Mouse polyomavirus DNA sequence DC(W2):DG(C26) DA(W3):DT(C25) DG(W4):DC(C24) DA(W5):DT(C23) DG(W6):DC(C22) DG(W7):DC(C21) DC(W8):DG(C20) DC(W9):DG(C19) DG(W10):DC(C18) DG(W11):DC(C17) DG(W12):DC(C16) DG(W13):DC(C15) DG(W14):DC(C14) DC(W15):DG(C13) DC(W16):DG(C12) DC(W17):DG(C11) DC(W18):DG(C10) DT(W19):DA(C9) DG(W20):DC(C8) DG(W21):DC(C7) DC(W22):DG(C6) DC(W23):DG(C5) DT(W24):DA(C4) DC(W25):DG(C3) DC(W26):DG(C2) chainA ( 17) SER306 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ASN307 0 0 0 0 0 0 0 0 0 0 0 12 8 1 0 0 0 0 0 0 0 0 0 0 0 ( 19) LYS308 0 0 0 0 0 0 0 0 5 10 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR309 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG357 0 0 0 0 0 0 0 0 0 0 0 0 0 9 19 0 0 0 0 0 0 0 0 0 0 prot.sequence sdfpssltgylshaiySNKTfpaflvystkekckqlydtigkfrpefkclvhyeeggmlffltmtkhRvsavknycsklcsvsflmckavtkpmecyqvvtaapfqlitenkpgl >4fb3_ABE:Origin_of_replication-binding_domain,_RBD-like; title=POLYOMAVIRUS T-AG BINDS SYMMETRICAL REPEATS AT THE VIRAL ORIGIN IN AN ASYMMETRICAL MANNER organism=Mouse polyomavirus DNA sequence DC(W2):DG(C26) DA(W3):DT(C25) DG(W4):DC(C24) DA(W5):DT(C23) DG(W6):DC(C22) DG(W7):DC(C21) DC(W8):DG(C20) DC(W9):DG(C19) DG(W10):DC(C18) DG(W11):DC(C17) DG(W12):DC(C16) DG(W13):DC(C15) DG(W14):DC(C14) DC(W15):DG(C13) DC(W16):DG(C12) DC(W17):DG(C11) DC(W18):DG(C10) DT(W19):DA(C9) DG(W20):DC(C8) DG(W21):DC(C7) DC(W22):DG(C6) DC(W23):DG(C5) DT(W24):DA(C4) DC(W25):DG(C3) DC(W26):DG(C2) chainA ( 17) SER306 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ASN307 0 0 0 0 0 0 0 0 0 0 0 12 8 1 0 0 0 0 0 0 0 0 0 0 0 ( 19) LYS308 0 0 0 0 0 0 0 0 5 10 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR309 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG357 0 0 0 0 0 0 0 0 0 0 0 0 0 9 19 0 0 0 0 0 0 0 0 0 0 chainB ( 17) SER306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 18) ASN307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 13 0 0 0 ( 19) LYS308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 9 4 ( 20) THR309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 68) ARG357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 chainE ( 17) SER306 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ASN307 0 0 0 0 11 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LYS308 0 2 11 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR309 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG357 0 0 0 0 0 0 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdfpssltgylshaiySNKTfpaflvystkekckqlydtigkfrpefkclvhyeeggmlffltmtkhRvsavknycsklcsvsflmckavtkpmecyqvvtaapfqlitenkpgl/sdfpssltgylshaiySNKTfpaflvystkekckqlydtigkfrpefkclvhyeeggmlffltmtkhRvsavknycsklcsvsflmckavtkpmecyqvvtaapfqlitenkpg/sdfpssltgylshaiySNKTfpaflvystkekckqlydtigkfrpefkclvhyeeggmlffltmtkhRvsavknycsklcsvsflmckavtkpmecyqvvtaapfqlitenkpg >4fbt_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 POST-INSERTION COMPLEX WITH THE N-(DEOXYGUANOSIN-8-YL)-1- AMINOPYRENE LESION organism=Sulfolobus solfataricus DNA sequence DC(P0):DG(T18) DC(P1):DG(T17) DA(P2):DT(T16) DA(P3):DT(T15) DT(P4):DA(T14) DA(P5):DT(T13) DC(P6):DG(T12) DC(P7):DG(T11) DA(P8):DT(T10) DG(P9):DC(T9) DT(P10):DA(T8) DC(P11):DG(T7) DC(P12):DC(T5) chainA ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 5 (297) SER297 0 0 0 0 0 0 0 2 0 0 0 0 0 (336) ARG336 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivSrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >4fbu_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DPO4 POLYMERASE PRE-INSERTION BINARY COMPLEX WITH THE N- (DEOXYGUANOSIN-8-YL)-1-AMINOPYRENE LESION organism=Sulfolobus solfataricus DNA sequence DC(D2):DG(C16) DC(D3):DG(C15) DC(D4):DG(C14) DA(D5):DT(C13) DA(D6):DT(C12) DT(D7):DA(C11) DA(D8):DT(C10) DC(D9):DG(C9) DC(D10):DG(C8) DA(D11):DT(C7) DG(D12):DC(C6) DT(D13):DA(C5) DC(D14):DG(C4) chainB ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 44) ALA44 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 76) MET76 0 0 0 0 0 0 0 0 0 0 0 0 1 (285) HIS285 0 0 0 0 0 0 2 0 0 0 0 0 0 (336) ARG336 0 0 0 0 0 0 0 0 3 17 0 0 0 (339) LYS339 0 0 0 0 4 1 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfYaqveevlnpslkgkpvvvcVfsgrfedsgAvAtanyearkfgvkAgipiveakkilpnavylpMrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfsKfi >4fcy_AB:Ribonuclease_H-like;Homeodomain-like;mu_transposase,_C-terminal_domain; title=CRYSTAL STRUCTURE OF THE BACTERIOPHAGE MU TRANSPOSOSOME organism=ENTEROBACTERIA PHAGE MU DNA sequence DG(C2):DC(D54) DT(C3):DA(D53) DT(C4):DA(D52) DT(C5):DA(D51) DT(C6):DA(D50) DC(C7):DG(D49) DG(C8):DC(D48) DC(C9):DG(D47) DA(C10):DT(D46) DT(C11):DA(D45) DT(C12):DA(D44) DT(C13):DA(D43) DA(C14):DT(D42) DT(C15):DA(D41) DC(C16):DG(D40) DG(C17):DC(D39) DT(C18):DA(D38) DG(C19):DC(D37) DA(C20):DT(D36) DA(C21):DT(D35) DA(C22):DT(D34) DC(C23):DG(D33) DG(C24):DC(D32) DC(C25):DG(D31) DT(C26):DA(D30) DT(C27):DA(D29) DT(C28):DA(D28) DC(C29):DG(D27) DG(C30):DC(D26) DC(C31):DG(D25) DG(C32):DC(D24) DT(C33):DA(D23) DT(C34):DA(D22) DT(C35):DA(D21) DT(C36):DA(D20) DT(C37):DA(D19) DC(C38):DG(D18) DG(C39):DC(D17) DT(C40):DA(D16) DG(C41):DC(D15) DC(C42):DG(D14) DG(C43):DC(D13) DC(C44):DG(D12) DC(C45):DG(D11) DG(C46):DC(D10) DC(C47):DG(D9) DT(C48):DA(D8) DT(C49):DA(D7) DC(C50):DG(D6) chainA ( 59) ARG146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ASP147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 (127) ARG226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 chainB ( 56) SER143 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) THR144 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG146 0 0 0 6 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ASP147 0 0 0 0 2 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR150 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) SER220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ALA222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) PHE225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence drealwskwdnasdsqrrlaekwlpavqaademlnqgistktafatvaghyqvsastlRDkyYqvqkfakpdwaaalvsefdedawqfliadylrpekpafRkcyerlelaarehgwsipsratafRriqqldeamvvacregehalmehldamqwingdgylhnvfvrwfngdvirpktwfwqdvktrkilgwrcdvsenidsirlsfmdvvtrygipedfhitidnttggapnryrfkvkeddpkglfllmgakmhwleeyvdkhpalagaytgpnpqakpdnygdravdaelflktlaegvamfnartgretemcggklsfddvfereyartivrkpteeqkrmlllpaeavnvsrkgeftlkvggslkgaknvyynlalmlagvkkvvvrfdpqqlhstvycytldgrficeaeclreyrrrqkqlksatkaaikaqkq/drealwskwdnasdsqrrlaekwlpavqaademlnqgistktafatvaghyqvsaSTlRDkyYqvqkfakpdwaaalvsefdedawqfliadylrpekpafRkcyerlelaarehgwsipSRAtaFrriqqldeamvvacregehldamqwingdgylhnvfvrwfngdvirpktwfwqdvktrkilgwrcdvsenidsirlsfmdvvtrygipedfhitidntrgaankwltggapnryrfkvkeddpkglfllmgakmhwtsvvagkgwgqakpverafgvggleeyvdkhpalagaytgpygdravdaelflktlaegvamfnartgretemcggklsfddvfereyartivrkpteeqkrmlllpaeavnvsrkgeftlkvggslkgaknvyynlalmlagvkkvvvrfdpqqlhstvycytldgrficeaeclaaagreyrrrqkqlksatkaaikaqkqmdalevaellp >4fcy_B:Ribonuclease_H-like;Homeodomain-like;mu_transposase,_C-terminal_domain; title=CRYSTAL STRUCTURE OF THE BACTERIOPHAGE MU TRANSPOSOSOME organism=ENTEROBACTERIA PHAGE MU DNA sequence DG(C2):DC(D54) DT(C3):DA(D53) DT(C4):DA(D52) DT(C5):DA(D51) DT(C6):DA(D50) DC(C7):DG(D49) DG(C8):DC(D48) DC(C9):DG(D47) DA(C10):DT(D46) DT(C11):DA(D45) DT(C12):DA(D44) DT(C13):DA(D43) DA(C14):DT(D42) DT(C15):DA(D41) DC(C16):DG(D40) DG(C17):DC(D39) DT(C18):DA(D38) DG(C19):DC(D37) DA(C20):DT(D36) DA(C21):DT(D35) DA(C22):DT(D34) DC(C23):DG(D33) DG(C24):DC(D32) DC(C25):DG(D31) DT(C26):DA(D30) DT(C27):DA(D29) DT(C28):DA(D28) DC(C29):DG(D27) DG(C30):DC(D26) DC(C31):DG(D25) DG(C32):DC(D24) DT(C33):DA(D23) DT(C34):DA(D22) DT(C35):DA(D21) DT(C36):DA(D20) DT(C37):DA(D19) DC(C38):DG(D18) DG(C39):DC(D17) DT(C40):DA(D16) DG(C41):DC(D15) DC(C42):DG(D14) DG(C43):DC(D13) DC(C44):DG(D12) DC(C45):DG(D11) DG(C46):DC(D10) DC(C47):DG(D9) DT(C48):DA(D8) DT(C49):DA(D7) DC(C50):DG(D6) chainB ( 56) SER143 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) THR144 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG146 0 0 0 6 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ASP147 0 0 0 0 2 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR150 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) SER220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ALA222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) PHE225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence drealwskwdnasdsqrrlaekwlpavqaademlnqgistktafatvaghyqvsaSTlRDkyYqvqkfakpdwaaalvsefdedawqfliadylrpekpafRkcyerlelaarehgwsipSRAtaFrriqqldeamvvacregehldamqwingdgylhnvfvrwfngdvirpktwfwqdvktrkilgwrcdvsenidsirlsfmdvvtrygipedfhitidntrgaankwltggapnryrfkvkeddpkglfllmgakmhwtsvvagkgwgqakpverafgvggleeyvdkhpalagaytgpygdravdaelflktlaegvamfnartgretemcggklsfddvfereyartivrkpteeqkrmlllpaeavnvsrkgeftlkvggslkgaknvyynlalmlagvkkvvvrfdpqqlhstvycytldgrficeaeclaaagreyrrrqkqlksatkaaikaqkqmdalevaellp >4ff1_A: title=N4 MINI-VRNAP TRANSCRIPTION INITIATION COMPLEX, 1 MIN AFTER SOAKING GTP, ATP AND MN organism=Enterobacteria phage N4 DNA sequence DT(C21) DT(C20) DC(C19) DG(C18) DA(C17) DG(C16) DG(C15) DC(C14) DG(C13) DA(C12) DA(C11) DG(C10) DA(C9) DA(C8) DA(C7) DA(C6) DC(C5) DT(C3) DT(C4):DC(C5) chainA (109) LYS114 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 (111) VAL116 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG119 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TRP129 0 0 0 0 0 49 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ALA171 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 (168) LYS173 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (169) ASP174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (172) ASP177 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (176) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 (181) GLN186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (197) THR202 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 (199) THR204 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (200) GLU205 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 (203) SER208 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (263) LYS268 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (264) THR269 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 (313) ARG318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 (419) ARG424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (670) ILE675 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 (673) TYR678 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (675) SER680 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (683) LYS688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (812) GLN817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (816) GLN821 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (896) ASP901 0 0 0 0 0 0 12 7 2 0 0 0 0 0 0 0 0 0 0 (899) ARG904 0 0 0 3 0 0 0 4 11 22 0 0 0 0 0 0 0 0 0 (912) VAL917 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (920) ILE925 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 prot.sequence eelkegidavypslvgtadskaegiknyfklsftlpeeqksrtvgseaplkdvaqalssraryelfteketanpafngevikrykelmehgegiadilrsrlakflntKdVgkRfaqgteanrWvggkllniveqdgdtfkyneqllqtavlaglqwrltatsntAiKDakDvaaItgidQallpeglveqfdtgmTlTEavSslaqkiesywglsrnpnaplgytkgiptamaaeilaafvestdvvenivdmseidpdnKKTiglytiteldsfdpinsfptaieeavlvnptekmffgddippvantqlRnpavrntpeqkaalkaeqatefyvhtpmvqfyetlgkdrilelmgagtlnkellndnhakslegknrsvedsynqlfsvieqvraqsedistvpihyaynmtrvgRmqmlgkynpqsaklvreailptkatldlsnqnnedfsafqlglaqaldikvhtmtrevmsdeltkllegnlkpaidmmvefnttgslpenavdvlntalgdrksfvalmalmeysrylvaedksafvtplyveadgvtngpinammlmtgglftpdwirniakgglfigspnktmnehrstadnndlyqastnalmeslgklrsnyasnmpiqsqidsllslmdlflpdinlgengalelkrgiaknpltItiYgSgargiagKlvssvtdaiyermsdvlkarakdpnisaamamfgkqaaseahaeellarflkdmetltstvpvkrkgvlelqstgtgakgkinpktytikgeqlkalqenmlhffveplrngitqtvgeslvysteqlQkatQiqsvvledmfkqrvqeklaekakdptwkkgdfltqkelndiqaslnnlapmietgsqtfyiagsenaevanqvlatnldDrmRvpmsiyapaqagVagipfmtIgtgdgmmmqtlstmkgapkntlkifdgmniglnditdasrkaneavytswqgnpiknvyesyakfmknvdfsklspealeaigksaleydqrenatvddianaasliernlrnialgvdirhkvldkvnlsidqmaavgapyqnngkidlsnmtpeqqadelnklfreelearkq >4ff2_A: title=N4 MINI-VRNAP TRANSCRIPTION INITIATION COMPLEX, 2 MIN AFTER SOAKING GTP, ATP AND MN organism=Enterobacteria phage N4 DNA sequence DT(C3) DT(C4) DC(C5) DA(C6) DA(C7) DA(C8) DA(C9) DG(C10):DC(C22) DA(C11):DT(C21) DA(C12):DT(C20) DG(C13):DC(C19) DC(C14):DG(C18) DG(C15):DA(C17) DG(C16) chainA (109) LYS114 0 0 0 0 0 0 0 0 0 0 0 0 7 4 (111) VAL116 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (114) ARG119 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (124) TRP129 0 0 0 0 0 0 0 0 0 0 0 0 0 46 (166) ALA171 0 0 0 0 5 1 0 0 0 0 0 0 0 0 (168) LYS173 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (169) ASP174 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (172) ASP177 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (176) ILE181 0 0 0 0 0 0 15 0 0 0 0 0 0 0 (181) GLN186 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (197) THR202 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (199) THR204 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (200) GLU205 0 0 0 0 0 11 2 0 0 0 0 0 0 0 (203) SER208 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (262) LYS267 0 0 0 0 0 0 0 14 0 0 0 0 0 0 (263) LYS268 0 0 0 0 0 0 0 10 0 0 0 0 0 0 (264) THR269 0 0 0 0 0 0 0 6 1 0 0 0 0 0 (313) ARG318 0 0 0 0 34 0 0 0 0 0 0 0 0 0 (666) ASN671 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (670) ILE675 0 18 0 0 0 0 0 0 0 0 0 0 0 0 (673) TYR678 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (675) SER680 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (683) LYS688 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (812) GLN817 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (816) GLN821 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (896) ASP901 0 0 0 0 0 0 0 0 0 0 2 8 12 0 (899) ARG904 0 0 0 0 0 0 0 0 0 22 11 7 0 0 (912) VAL917 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (920) ILE925 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eelkegidavypslvgtadskaegiknyfklsftlpeeqksrtvgseaplkdvaqalssraryelfteketanpafngevikrykelmehgegiadilrsrlakflntKdVgkRfaqgteanrWvggkllniveqdgdtfkyneqllqtavlaglqwrltatsntAiKDakDvaaItgidQallpeglveqfdtgmTlTEavSslaqkiesywglsrnpnaplgytkgiptamaaeilaafvestdvvenivdmseidpdnKKTiglytiteldsfdpinsfptaieeavlvnptekmffgddippvantqlRnpavrntpeqkaalkaeqatefyvhtpmvqfyetlgkdrilelmgagtlnkellndnhakslegknrsvedsynqlfsvieqvraqsedistvpihyaynmtrvgRmqmlgkynpqsaklvreailptkatldlsnqnnedfsafqlglaqaldikvhtmtrevmsdeltkllegnlkpaidmmvefnttgslpenavdvlntalgdrksfvalmalmeysrylvaedksafvtplyveadgvtngpinammlmtgglftpdwirniakgglfigspnktmnehrstadnndlyqastnalmeslgklrsnyasnmpiqsqidsllslmdlflpdinlgengalelkrgiakNpltItiYgSgargiagKlvssvtdaiyermsdvlkarakdpnisaamamfgkqaaseahaeellarflkdmetltstvpvkrkgvlelqstgtgakgkinpktytikgeqlkalqenmlhffveplrngitqtvgeslvysteqlQkatQiqsvvledmfkqrvqeklaekakdptwkkgdfltqkelndiqaslnnlapmietgsqtfyiagsenaevanqvlatnldDrmRvpmsiyapaQagVagipfmtIgtgdgmmmqtlstmkgapkntlkifdgmniglnditdasrkaneavytswqgnpiknvyesyakfmknvdfsklspealeaigksaleydqrenatvddianaasliernlrnialgvdirhkvldkvnlsidqmaavgapyqnngkidlsnmtpeqqadelnklfreelearkq >4ff3_B: title=N4 MINI-VRNAP TRANSCRIPTION INITIATION COMPLEX, 3 MIN AFTER SOAKING GTP, ATP AND MN organism=Enterobacteria phage N4 DNA sequence DT(D3) DT(D4) DC(D5) DA(D6) DA(D7) DA(D8) DA(D9) DG(D10):DC(D22) DA(D11):DT(D21) DA(D12):DT(D20) DG(D13):DC(D19) DC(D14):DG(D18) DG(D15):DA(D17) DG(D16) chainB (109) LYS114 0 0 0 0 0 0 0 0 0 0 0 0 10 4 (111) VAL116 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (114) ARG119 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (124) TRP129 0 0 0 0 0 0 0 0 0 0 0 0 0 45 (166) ALA171 0 0 0 0 5 1 0 0 0 0 0 0 0 0 (168) LYS173 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (169) ASP174 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (172) ASP177 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (176) ILE181 0 0 0 0 0 0 16 0 0 0 0 0 0 0 (181) GLN186 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (197) THR202 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (199) THR204 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (200) GLU205 0 0 0 0 0 7 4 0 0 0 0 0 0 0 (203) SER208 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (262) LYS267 0 0 0 0 0 0 0 12 0 0 0 0 0 0 (263) LYS268 0 0 0 0 0 0 0 10 0 0 0 0 0 0 (264) THR269 0 0 0 0 0 0 0 7 1 0 0 0 0 0 (313) ARG318 0 0 0 0 36 0 0 0 0 0 0 0 0 0 (670) ILE675 0 18 0 0 0 0 0 0 0 0 0 0 0 0 (673) TYR678 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (675) SER680 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (683) LYS688 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (812) GLN817 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (896) ASP901 0 0 0 0 0 0 0 0 0 0 2 8 16 0 (899) ARG904 0 0 0 0 0 0 0 0 0 21 13 6 0 0 (912) VAL917 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (920) ILE925 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eelkegidavypslvgtadskaegiknyfklsftlpeeqksrtvgseaplkdvaqalssraryelfteketanpafngevikrykelmehgegiadilrsrlakflntKdVgkRfaqgteanrWvggkllniveqdgdtfkyneqllqtavlaglqwrltatsntAiKDakDvaaItgidQallpeglveqfdtgmTlTEavSslaqkiesywglsrnpnaplgytkgiptamaaeilaafvestdvvenivdmseidpdnKKTiglytiteldsfdpinsfptaieeavlvnptekmffgddippvantqlRnpavrntpeqkaalkaeqatefyvhtpmvqfyetlgkdrilelmgagtlnkellndnhakslegknrsvedsynqlfsvieqvraqsedistvpihyaynmtrvgrmqmlgkynpqsaklvreailptkatldlsnqnnedfsafqlglaqaldikvhtmtrevmsdeltkllegnlkpaidmmvefnttgslpenavdvlntalgdrksfvalmalmeysrylvaedksafvtplyveadgvtngpinammlmtgglftpdwirniakgglfigspnktmnehrstadnndlyqastnalmeslgklrsnyasnmpiqsqidsllslmdlflpdinlgengalelkrgiaknpltItiYgSgargiagKlvssvtdaiyermsdvlkarakdpnisaamamfgkqaaseahaeellarflkdmetltstvpvkrkgvlelqstgtgakgkinpktytikgeqlkalqenmlhffveplrngitqtvgeslvysteqlQkatqiqsvvledmfkqrvqeklaekakdptwkkgdfltqkelndiqaslnnlapmietgsqtfyiagsenaevanqvlatnldDrmRvpmsiyapaqagVagipfmtIgtgdgmmmqtlstmkgapkntlkifdgmniglnditdasrkaneavytswqgnpiknvyesyakfmknvdfsklspealeaigksaleydqrenatvddianaasliernlrnialgvdirhkvldkvnlsidqmaavgapyqnngkidlsnmtpeqqadelnklfreelearkq >4ff4_A: title=N4 MINI-VRNAP TRANSCRIPTION INITIATION COMPLEX, 4 MIN AFTER SOAKING GTP, ATP AND MN organism=Enterobacteria phage N4 DNA sequence DT(C3) DT(C4) DC(C5) DA(C6) DA(C7) DA(C8) DA(C9) DG(C10):DC(C22) DA(C11):DT(C21) DA(C12):DT(C20) DG(C13):DC(C19) DC(C14):DG(C18) DG(C15):DA(C17) DG(C16) chainA (109) LYS114 0 0 0 0 0 0 0 0 0 0 0 0 7 4 (111) VAL116 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (114) ARG119 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (124) TRP129 0 0 0 0 0 0 0 0 0 0 0 0 0 47 (166) ALA171 0 0 0 0 5 1 0 0 0 0 0 0 0 0 (168) LYS173 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (169) ASP174 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (172) ASP177 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (176) ILE181 0 0 0 0 0 0 13 0 0 0 0 0 0 0 (181) GLN186 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (197) THR202 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (199) THR204 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (200) GLU205 0 0 0 0 0 9 3 0 0 0 0 0 0 0 (203) SER208 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (262) LYS267 0 0 0 0 0 0 0 9 0 0 0 0 0 0 (263) LYS268 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (264) THR269 0 0 0 0 0 0 0 8 1 0 0 0 0 0 (313) ARG318 0 0 0 0 34 0 0 0 0 0 0 0 0 0 (670) ILE675 0 17 0 0 0 0 0 0 0 0 0 0 0 0 (673) TYR678 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (675) SER680 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (683) LYS688 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (812) GLN817 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (816) GLN821 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (896) ASP901 0 0 0 0 0 0 0 0 0 0 2 6 13 0 (899) ARG904 0 0 0 0 0 0 0 0 0 21 11 7 0 0 (912) VAL917 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (920) ILE925 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eelkegidavypslvgtadskaegiknyfklsftlpeeqksrtvgseaplkdvaqalssraryelfteketanpafngevikrykelmehgegiadilrsrlakflntKdVgkRfaqgteanrWvggkllniveqdgdtfkyneqllqtavlaglqwrltatsntAiKDakDvaaItgidQallpeglveqfdtgmTlTEavSslaqkiesywglsrnpnaplgytkgiptamaaeilaafvestdvvenivdmseidpdnKKTiglytiteldsfdpinsfptaieeavlvnptekmffgddippvantqlRnpavrntpeqkaalkaeqatefyvhtpmvqfyetlgkdrilelmgagtlnkellndnhakslegknrsvedsynqlfsvieqvraqsedistvpihyaynmtrvgrmqmlgkynpqsaklvreailptkatldlsnqnnedfsafqlglaqaldikvhtmtrevmsdeltkllegnlkpaidmmvefnttgslpenavdvlntalgdrksfvalmalmeysrylvaedksafvtplyveadgvtngpinammlmtgglftpdwirniakgglfigspnktmnehrstadnndlyqastnalmeslgklrsnyasnmpiqsqidsllslmdlflpdinlgengalelkrgiaknpltItiYgSgargiagKlvssvtdaiyermsdvlkarakdpnisaamamfgkqaaseahaeellarflkdmetltstvpvkrkgvlelqstgtgakgkinpktytikgeqlkalqenmlhffveplrngitqtvgeslvysteqlQkatQiqsvvledmfkqrvqeklaekakdptwkkgdfltqkelndiqaslnnlapmietgsqtfyiagsenaevanqvlatnldDrmRvpmsiyapaqagVagipfmtIgtgdgmmmqtlstmkgapkntlkifdgmniglnditdasrkaneavytswqgnpiknvyesyakfmknvdfsklspealeaigksaleydqrenatvddianaasliernlrnialgvdirhkvldkvnlsidqmaavgapyqnngkidlsnmtpeqqadelnklfreelearkq >4fgn_A:Origin_of_replication-binding_domain,_RBD-like; title=CRYSTAL STRUCTURE OF THE SV40 LARGE T-ANTIGEN ORIGIN BINING DOMAIN BOUND TO SITE I DNA organism=Simian virus 40 DNA sequence DG(Y1):DC(Z22) DA(Y2):DT(Z21) DG(Y3):DC(Z20) DG(Y4):DC(Z19) DA(Y5):DT(Z18) DG(Y6):DC(Z17) DG(Y7):DC(Z16) DC(Y8):DG(Z15) DT(Y9):DA(Z14) DT(Y10):DA(Z13) DT(Y11):DA(Z12) DT(Y12):DA(Z11) DT(Y13):DA(Z10) DT(Y14):DA(Z9) DG(Y15):DC(Z8) DG(Y16):DC(Z7) DA(Y17):DT(Z6) DG(Y18):DC(Z5) DG(Y19):DC(Z4) DC(Y20):DG(Z3) DC(Y21):DG(Z2) DT(Y22):DA(Z1) chainA ( 20) SER152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 ( 21) ASN153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 7 4 0 0 ( 22) ARG154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 2 1 0 0 0 0 ( 23) THR155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 70) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 72) ARG204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 0 prot.sequence edpkdfpsellsflshavfSNRTlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphRhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpgglkehdfn >4fgn_AB:Origin_of_replication-binding_domain,_RBD-like; title=CRYSTAL STRUCTURE OF THE SV40 LARGE T-ANTIGEN ORIGIN BINING DOMAIN BOUND TO SITE I DNA organism=Simian virus 40 DNA sequence DG(Y1):DC(Z22) DA(Y2):DT(Z21) DG(Y3):DC(Z20) DG(Y4):DC(Z19) DA(Y5):DT(Z18) DG(Y6):DC(Z17) DG(Y7):DC(Z16) DC(Y8):DG(Z15) DT(Y9):DA(Z14) DT(Y10):DA(Z13) DT(Y11):DA(Z12) DT(Y12):DA(Z11) DT(Y13):DA(Z10) DT(Y14):DA(Z9) DG(Y15):DC(Z8) DG(Y16):DC(Z7) DA(Y17):DT(Z6) DG(Y18):DC(Z5) DG(Y19):DC(Z4) DC(Y20):DG(Z3) DC(Y21):DG(Z2) DT(Y22):DA(Z1) chainA ( 20) SER152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 ( 21) ASN153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 7 4 0 0 ( 22) ARG154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 2 1 0 0 0 0 ( 23) THR155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 70) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 72) ARG204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 0 chainB ( 19) SER152 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ASN153 0 0 0 0 0 18 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG154 0 0 7 9 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR155 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG204 0 0 0 0 0 0 0 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence edpkdfpsellsflshavfSNRTlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphRhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpgglkehdfn/dpkdfpsellsflshavfSNRTlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphrhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpgglkehdf >4fj5_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP/DT organism=Enterobacteria phage RB69 DNA sequence DA(T5):DT(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 0 6 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4fj7_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DGTP/DT organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DG(P115):DC(T5) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 (800) LYS800 0 0 0 0 4 4 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4fj8_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP/DT organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DG(P111):DT(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 6 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 (800) LYS800 0 0 0 0 2 4 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4fj9_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP/DT organism=Enterobacteria phage RB69 DNA sequence DT(T4):TTP(A1001) DC(T5):DG(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (411) ASP411 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) THR413 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) SER414 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) ALA415 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) ARG482 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) LYS486 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (560) LYS560 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (564) ASN564 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (623) ASP623 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 0 6 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (800) LYS800 0 0 0 0 0 0 0 0 4 2 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4fjg_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP/DC organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 6 5 0 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4fjh_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DGTP/DC organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DT(P115):DA(T5) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 6 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4fji_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP/DC organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >4fjj_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP/DC organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DOC(P115):DG(T5) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4fjk_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP/DA organism=Enterobacteria phage RB69 DNA sequence DG(T5):DC(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 0 6 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4fjl_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DGTP/DA organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DC(P115):DG(T5) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4fjm_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP/DA organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 7 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4fjn_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP/DA organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DOC(P115):DG(T5) TTP(A1001):DA(T4) chainA (361) PRO361 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (411) ASP411 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (413) THR413 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (414) SER414 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (415) ALA415 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (482) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (486) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (560) LYS560 0 0 0 0 0 0 0 0 0 0 0 0 0 17 (564) ASN564 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (623) ASP623 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 6 0 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdm >4fjx_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP/DG organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DC(P115):DG(T5) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4fk0_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP/DG organism=Enterobacteria phage RB69 DNA sequence DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (706) LYS706 7 5 0 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdm >4fk2_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP/DG organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DOC(P115):DG(T5) TTP(A1001):DG(T4) chainA (361) PRO361 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (411) ASP411 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (413) THR413 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (414) SER414 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (415) ALA415 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (482) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (486) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (560) LYS560 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (564) ASN564 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (567) ALA567 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (623) ASP623 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (706) LYS706 0 0 0 0 0 0 0 0 0 0 6 7 0 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglAgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4fk4_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DGTP/DG organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4flt_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PYROCOCCUS ABYSSI B FAMILY DNA POLYMERASE BOUND TO A DSDNA, IN EDITION MODE organism=Pyrococcus abyssi DNA sequence DC(T6):DG(P8) DG(T7):DC(P7) DT(T8):DA(P6) DG(T9):DC(P5) DA(T10):DT(P4) DT(T11):DA(P3) DC(T12):DG(P2) DG(T13):DC(P1) chainA (248) ASP246 1 0 0 0 0 0 0 0 (267) ARG265 8 0 0 0 0 0 0 0 (612) ARG612 0 4 2 0 0 0 0 0 prot.sequence agmiidadyitedgkpiirifkkekgefkveydrtfrpyiyallkddsaidevkkitaerhgkivritevekvqkkflgrpievwklylehpqdvpairekirehpavvdifeydipfakrylidkgltpmegneeltflavdietlyhegeefgkgpiimisyadeegakvitwksidlpyvevvsseremikrlvkvirekdpdviityngdnfafpyllkraeklgiklplgrdnsepkmqrmgDslaveikgrihfdlfpviRrtinlptytleavyeaifgkskekvyaheiaeawetgkglervakysmedakvtfelgkeffpmeaqlarlvgqpvwdvsrsstgnlvewfllrkayernelapnkpdereyerrlresyegvkepekglwegivsldfrslypsiiithnvspdtlnrenckeydvapqvghrfckdfpgfipsllgnlleerqkikkrmkeskdpvekklldyrqraikilansyygyygyakarwyckecaesvtawgrqyidlvrrelesrgfkvlyidtdglyatipgakheeikekalkfveyinsklpglleleyegfyargffvtkkkyalideegkivtrgleivRrdwseiaketqakvleailkhgnvdeavkivkevteklskyeippeklviyeqitrplseykaigphvavakrlaakgvkvkpgmvigyivlrgdgpiskraiaieefdpkkhkydaeyyienqvlpaverilrafgyrkedlky >4flu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PYROCOCCUS ABYSSI B FAMILY DNA POLYMERASE BOUND TO A DSDNA, IN EDITION MODE organism=Pyrococcus abyssi DNA sequence DC(P1):DG(T13) DG(P2):DC(T12) DA(P3):DT(T11) DT(P4):DA(T10) DC(P5):DG(T9) DA(P6):DT(T8) DC(P7):DG(T7) DG(P8):DC(T6) chainA (249) ASP246 0 0 0 0 0 0 0 1 (268) ARG265 0 0 0 0 0 0 0 9 (613) ARG612 0 0 0 0 0 2 4 0 prot.sequence hagmiidadyitedgkpiirifkkekgefkveydrtfrpyiyallkddsaidevkkitaerhgkivritevekvqkkflgrpievwklylehpqdvpairekirehpavvdifeydipfakrylidkgltpmegneeltflavdietlyhegeefgkgpiimisyadeegakvitwksidlpyvevvsseremikrlvkvirekdpdviityngdnfafpyllkraeklgiklplgrdnsepkmqrmgDslaveikgrihfdlfpviRrtinlptytleavyeaifgkskekvyaheiaeawetgkglervakysmedakvtfelgkeffpmeaqlarlvgqpvwdvsrsstgnlvewfllrkayernelapnkpdereyerrlresyegvkepekglwegivsldfrslypsiiithnvspdtlnrenckeydvapqvghrfckdfpgfipsllgnlleerqkikkrmkeskdpvekklldyrqraikilansyygyygyakarwyckecaesvtawgrqyidlvrrelesrgfkvlyidtdglyatipgakheeikekalkfveyinsklpglleleyegfyargffvtkkkyalideegkivtrgleivRrdwseiaketqakvleailkhgnvdeavkivkevteklskyeippeklviyeqitrplseykaigphvavakrlaakgvkvkpgmvigyivlrgdgpiskraiaieefdpkkhkydaeyyienqvlpaverilrafgyrkedlky >4flv_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PYROCOCCUS ABYSSI B FAMILY DNA POLYMERASE BOUND TO A DSDNA, IN EDITION MODE organism=Pyrococcus abyssi DNA sequence DC(T6):DG(P8) DG(T7):DC(P7) DT(T8):DA(P6) DG(T9):DC(P5) DA(T10):DT(P4) DT(T11):DA(P3) DC(T12):DG(P2) DG(T13):DC(P1) chainA (249) ASP246 1 0 0 0 0 0 0 0 (268) ARG265 9 0 0 0 0 0 0 0 (612) ARG612 0 4 2 0 0 0 0 0 prot.sequence hagmiidadyitedgkpiirifkkekgefkveydrtfrpyiyallkddsaidevkkitaerhgkivritevekvqkkflgrpievwklylehpqdvpairekirehpavvdifeydipfakrylidkgltpmegneeltflavdietlyhegeefgkgpiimisyadeegakvitwksidlpyvevvsseremikrlvkvirekdpdviityngdnfafpyllkraeklgiklplgrdnsepkmqrmgDslaveikgrihfdlfpviRrtinlptytleavyeaifgkskekvyaheiaeawetgkglervakysmedakvtfelgkeffpmeaqlarlvgqpvwdvsrsstgnlvewfllrkayernelapnkpdereyerrlresyegkepekglwegivsldfrslypsiiithnvspdtlnrenckeydvapqvghrfckdfpgfipsllgnlleerqkikkrmkeskdpvekklldyrqraikilansyygyygyakarwyckecaesvtawgrqyidlvrrelesrgfkvlyidtdglyatipgakheeikekalkfveyinsklpglleleyegfyargffvtkkkyalideegkivtrgleivRrdwseiaketqakvleailkhgnvdeavkivkevteklskyeippeklviyeqitrplseykaigphvavakrlaakgvkvkpgmvigyivlrgdgpiskraiaieefdpkkhkydaeyyienqvlpaverilrafgyrkedlky >4flw_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PYROCOCCUS ABYSSI B FAMILY DNA POLYMERASE BOUND TO A DSDNA, IN EDITION MODE organism=Pyrococcus abyssi DNA sequence DC(P1):DG(T13) DG(P2):DC(T12) DA(P3):DT(T11) DT(P4):DA(T10) DC(P5):DG(T9) DA(P6):DT(T8) DC(P7):DG(T7) DG(P8):DC(T6) chainA (249) ASP246 0 0 0 0 0 0 0 1 (268) ARG265 0 0 0 0 0 0 0 10 (613) ARG612 0 0 0 0 0 1 4 0 prot.sequence hagmiidadyitedgkpiirifkkekgefkveydrtfrpyiyallkddsaidevkkitaerhgkivritevekvqkkflgrpievwklylehpqdvpairekirehpavvdifeydipfakrylidkgltpmegneeltflavdietlyhegeefgkgpiimisyadeegakvitwksidlpyvevvsseremikrlvkvirekdpdviityngdnfafpyllkraeklgiklplgrdnsepkmqrmgDslaveikgrihfdlfpviRrtinlptytleavyeaifgkskekvyaheiaeawetgkglervakysmedakvtfelgkeffpmeaqlarlvgqpvwdvsrsstgnlvewfllrkayernelapnkpdereyerrlresyegvkepekglwegivsldfrslypsiiithnvspdtlnrenckeydvapqvghrfckdfpgfipsllgnlleerqkikkrmkeskdpvekklldyrqraikilansyygyygyakarwyckecaesvtawgrqyidlvrrelesrgfkvlyidtdglyatipgakheeikekalkfveyinsklpglleleyegfyargffvtkkkyalideegkivtrgleivRrDwseiaketqakvleailkhgnvdeavkivkevteklskyeippeklviyeqitrplseykaigphvavakrlaakgvkvkpgmvigyivlrgdgpiskraiaieefdpkkhkydaeyyienqvlpaverilrafgyrkedlky >4flx_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PYROCOCCUS ABYSSI B FAMILY DNA POLYMERASE BOUND TO A DSDNA, IN EDITION MODE organism=Pyrococcus abyssi DNA sequence DC(P1):DG(T13) DG(P2):DC(T12) DA(P3):DT(T11) DT(P4):DA(T10) DC(P5):DG(T9) DA(P6):DT(T8) DC(P7):DG(T7) DG(P8):DC(T6) chainA (268) ARG265 0 0 0 0 0 0 0 10 (613) ARG612 0 0 0 0 0 1 7 0 prot.sequence hagmiidadyitedgkpiirifkkekgefkveydrtfrpyiyallkddsaidevkkitaerhgkivritevekvqkkflgrpievwklylehpqdvpairekirehpavvdifeydipfakrylidkgltpmegneeltflavdietlyhegeefgkgpiimisyadeegakvitwksidlpyvevvsseremikrlvkvirekdpdviityngdnfafpyllkraeklgiklplgrdnsepkmqrmgdslaveikgrihfdlfpviRrtinlptytleavyeaifgkskekvyaheiaeawetgkglervakysmedakvtfelgkeffpmeaqlarlvgqpvwdvsrsstgnlvewfllrkayernelapnkpdereyerrlresyegvkepekglwegivsldfrslypsiiithnvspdtlnrenckeydvapqvghrfckdfpgfipsllgnlleerqkikkrmkeskdpvekklldyrqraikilansyygyygyakarwyckecaesvtawgrqyidlvrrelesrgfkvlyidtdglyatipgakheeikekalkfveyinsklpglleleyegfyargffvtkkkyalideegkivtrgleivRrdwseiaketqakvleailkhgnvdeavkivkevteklskyeippeklviyeqitrplseykaigphvavakrlaakgvkvkpgmvigyivlrgdgpiskraiaieefdpkkhkydaeyyienqvlpaverilrafgyrkedlky >4fly_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PYROCOCCUS ABYSSI B FAMILY DNA POLYMERASE BOUND TO A DSDNA, IN EDITION MODE organism=Pyrococcus abyssi DNA sequence DC(P1):DG(T13) DG(P2):DC(T12) DA(P3):DT(T11) DT(P4):DA(T10) DC(P5):DG(T9) DA(P6):DT(T8) DC(P7):DG(T7) DG(P8):DC(T6) chainA (267) ARG265 0 0 0 0 0 0 0 4 (610) ARG612 0 0 0 0 0 1 5 0 prot.sequence agmiidadyitedgkpiirifkkekgefkveydrtfrpyiyallkddsaidevkkitaerhgkivritevekvqkkflgrpievwklylehpqdvpairekirehpavvdifeydipfakrylidkgltpmegneeltflavdietlyhegeefgkgpiimisyadeegakvitwksidlpyvevvsseremikrlvkvirekdpdviityngdnfafpyllkraeklgiklplgrdnsepkmqrmgdslaveikgrihfdlfpviRrtinlptytleavyeaifgkskekvyaheiaeawetgkglervakysmedakvtfelgkeffpmeaqlarlvgqpvwdvsrsstgnlvewfllrkayernelapnkpdereyerrlresyekepekglwegivsldfrslypsiiithnvspdtlnrenckeydvapqvghrfckdfpgfipsllgnlleerqkikkrmkeskdpvekklldyrqraikilansyygyygyakarwyckecaesvtawgrqyidlvrrelesrgfkvlyidtdglyatipgakheeikekalkfveyinsklpglleleyegfyargffvtkkkyalideegkivtrgleivRrdwseiaketqakvleailkhgnvdeavkivkevteklskyeippeklviyeqitrplseykaigphvavakrlaakgvkvkpgmvigyivlrgdgpiskraiaieefdpkkhkydaeyyienqvlpaverilrafgyrkedlky >4flz_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PYROCOCCUS ABYSSI B FAMILY DNA POLYMERASE BOUND TO A DSDNA, IN EDITION MODE organism=Pyrococcus abyssi DNA sequence DC(T8):DG(P8) DG(T9):DC(P7) DT(T10):DA(P6) DG(T11):DC(P5) DA(T12):DT(P4) DT(T13):DA(P3) DC(T14):DG(P2) DG(T15):DC(P1) chainA (609) ARG612 0 5 1 0 0 0 0 0 prot.sequence agmiidadyitedgkpiirifkkekgefkveydrtfrpyiyallkddsaidevkkitaerhgkivritevekvqkkflgrpievwklylehpqdvpairekirehpavvdifeydipfakrylidkgltpmegneeltflavdietlyhegeefgkgpiimisyadeegakvitwksidlpyvevvsseremikrlvkvirekdpdviityngdnfafpyllkraeklgiklplgrdnsepkmqrmgdslaveikgrihfdlfpvirrtinlptytleavyeaifgkskekvyaheiaeawetgkglervakysmedakvtfelgkeffpmeaqlarlvgqpvwdvsrsstgnlvewfllrkayernelapnkpdereyerrlresykepekglwegivsldfrslypsiiithnvspdtlnrenckeydvapqvghrfckdfpgfipsllgnlleerqkikkrmkeskdpvekklldyrqraikilansyygyygyakarwyckecaesvtawgrqyidlvrrelesrgfkvlyidtdglyatipgakheeikekalkfveyinsklpglleleyegfyargffvtkkkyalideegkivtrgleivRrdwseiaketqakvleailkhgnvdeavkivkevteklskyeippeklviyeqitrplseykaigphvavakrlaakgvkvkpgmvigyivlrgdgpiskraiaieefdpkkhkydaeyyienqvlpaverilrafgyrkedlky >4fm0_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PYROCOCCUS ABYSSI B FAMILY DNA POLYMERASE BOUND TO A DSDNA, IN EDITION MODE organism=Pyrococcus abyssi DNA sequence DC(P1):DG(T15) DG(P2):DC(T14) DA(P3):DT(T13) DT(P4):DA(T12) DC(P5):DG(T11) DA(P6):DT(T10) DC(P7):DG(T9) DG(P8):DC(T8) chainA (267) ARG265 0 0 0 0 0 0 0 10 (609) ARG612 0 0 0 0 0 1 5 0 prot.sequence agmiidadyitedgkpiirifkkekgefkveydrtfrpyiyallkddsaidevkkitaerhgkivritevekvqkkflgrpievwklylehpqdvpairekirehpavvdifeydipfakrylidkgltpmegneeltflavdietlyhegeefgkgpiimisyadeegakvitwksidlpyvevvsseremikrlvkvirekdpdviityngdnfafpyllkraeklgiklplgrdnsepkmqrmgdslaveikgrihfdlfpviRrtinlptytleavyeaifgkskekvyaheiaeawetgkglervakysmedakvtfelgkeffpmeaqlarlvgqpvwdvsrsstgnlvewfllrkayernelapnkpdereyerrlresykepekglwegivsldfrslypsiiithnvspdtlnrenckeydvapqvghrfckdfpgfipsllgnlleerqkikkrmkeskdpvekklldyrqraikilansyygyygyakarwyckecaesvtawgrqyidlvrrelesrgfkvlyidtdglyatipgakheeikekalkfveyinsklpglleleyegfyargffvtkkkyalideegkivtrgleivRrdwseiaketqakvleailkhgnvdeavkivkevteklskyeippeklviyeqitrplseykaigphvavakrlaakgvkvkpgmvigyivlrgdgpiskraiaieefdpkkhkydaeyyienqvlpaverilrafgyrkedlky >4fm1_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PYROCOCCUS ABYSSI B FAMILY DNA POLYMERASE BOUND TO A DSDNA, IN EDITION MODE organism=Pyrococcus abyssi DNA sequence DC(P1):DG(T13) DG(P2):DC(T12) DA(P3):DT(T11) DT(P4):DA(T10) DC(P5):DG(T9) DA(P6):DT(T8) DC(P7):DG(T7) DG(P8):DC(T6) chainA (267) ARG265 0 0 0 0 0 0 0 5 (610) ARG612 0 0 0 0 0 1 5 0 prot.sequence agmiidadyitedgkpiirifkkekgefkveydrtfrpyiyallkddsaidevkkitaerhgkivritevekvqkkflgrpievwklylehpqdvpairekirehpavvdifeydipfakrylidkgltpmegneeltflavdietlyhegeefgkgpiimisyadeegakvitwksidlpyvevvsseremikrlvkvirekdpdviityngdnfafpyllkraeklgiklplgrdnsepkmqrmgdslaveikgrihfdlfpviRrtinlptytleavyeaifgkskekvyaheiaeawetgkglervakysmedakvtfelgkeffpmeaqlarlvgqpvwdvsrsstgnlvewfllrkayernelapnkpdereyerrlresyekepekglwegivsldfrslypsiiithnvspdtlnrenckeydvapqvghrfckdfpgfipsllgnlleerqkikkrmkeskdpvekklldyrqraikilansyygyygyakarwyckecaesvtawgrqyidlvrrelesrgfkvlyidtdglyatipgakheeikekalkfveyinsklpglleleyegfyargffvtkkkyalideegkivtrgleivRrdwseiaketqakvleailkhgnvdeavkivkevteklskyeippeklviyeqitrplseykaigphvavakrlaakgvkvkpgmvigyivlrgdgpiskraiaieefdpkkhkydaeyyienqvlpaverilrafgyrkedlky >4fm2_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PYROCOCCUS ABYSSI B FAMILY DNA POLYMERASE (TRIPLE MUTANT) BOUND TO A DSDNA, IN EDITION MODE organism=Pyrococcus abyssi DNA sequence DC(P1):DG(T15) DG(P2):DC(T14) DA(P3):DT(T13) DT(P4):DA(T12) DC(P5):DG(T11) DA(P6):DT(T10) DC(P7):DG(T9) DG(P8):DC(T8) chainA (267) ARG265 0 0 0 0 0 0 0 10 (608) ARG612 0 0 0 0 0 1 6 0 prot.sequence agmiiaadyitedgkpiirifkkekgefkveydrtfrpyiyallkddsaidevkkitaerhgkivritevekvqkkflgrpievwklylehpqdvpairekirehpavvdifeydipfakrylidkgltpmegneeltflavdietlyhegeefgkgpiimisyadeegakvitwksidlpyvevvsseremikrlvkvirekdpdviityngdnfafpyllkraeklgiklplgrdnsepkmqrmgdslavaikgrihfdlfpviRrtinlptytleavyeaifgkskekvyaheiaeawetgkglervakysmedakvtfelgkeffpmeaqlarlvgqpvwavsrsstgnlvewfllrkayernelapnkpdereyerrlreskepekglwegivsldfrslypsiiithnvspdtlnrenckeydvapqvghrfckdfpgfipsllgnlleerqkikkrmkeskdpvekklldyrqraikilansyygyygyakarwyckecaesvtawgrqyidlvrrelesrgfkvlyidtdglyatipgakheeikekalkfveyinsklpglleleyegfyargffvtkkkyalideegkivtrgleivRrdwseiaketqakvleailkhgnvdeavkivkevteklskyeippeklviyeqitrplseykaigphvavakrlaakgvkvkpgmvigyivlrgdgpiskraiaieefdpkkhkydaeyyienqvlpaverilrafgyrkedlky >4fm9_A:Type_II_DNA_topoisomerase; title=HUMAN TOPOISOMERASE II ALPHA BOUND TO DNA organism=Homo sapiens DNA sequence DG(C1):DC(D17) DA(C2):DT(D16) DG(C3):DC(D15) DG(C4):DC(D14) DA(C5):DT(D13) DT(C6):DA(D12) DG(C7):DC(D11) DA(C8):DT(D10) DC(C9):DG(D9) DG(C10):DC(D8) DA(C11):DT(D7) DT(C12):DA(D6) DG(C13):DC(D5) chainA ( 57) LYS489 0 0 0 0 0 0 0 0 0 0 1 5 6 (278) ASP710 0 0 0 0 0 0 0 0 0 1 0 0 0 (422) GLU854 0 0 0 0 0 0 0 0 1 0 0 0 0 (424) ILE856 0 0 0 0 0 0 0 0 29 18 0 0 0 (429) SER861 0 0 0 0 0 0 0 0 5 0 0 0 0 prot.sequence nrikgipklddandaggrnstectliltegdsaktlavsglgvvgrdkygvfplrgKilnvreashkqimenaeinniikivglqykknyededslktlrygkimimtdqdqdgshikgllinfihhnwpsllrhrfleefitpivkvsknkqemafyslpefeewksstpnhkkwkvkyykglgtstskeakeyfadmkrhriqfkysgpeddaaislafskkqiddrkewltnfmedrrqrkllglpedylygqtttyltyndfinkelilfsnsDnersipsmvdglkpgqrkvlftcfkrndkrevkvaqlagsvaemssyhhgemslmmtiinlaqnfvgsnnlnllqpigqfgtrlhggkdsaspryiftmlsslarllfppkddhtlkflyddnqrvepewyipiipmvlingaEgIgtgwSckipnfdvreivnnirrlmdgeeplpmlpsyknfkgtieelapnqyvisgevailnsttieiselpvrtwtqtykeqvlepmlngtektpplitdyreyhtdttvkfvvkmteeklaeaervglhkvfklqtsltcnsmvlfdhvgclkkydtvldilrdffelrlkyyglrkewllgmlgaesaklnnqarfilekidgkiiienkpkkelikvliqrgydsdpvkawketfnylldmplwyltkekkdelcrlrnekeqeldtlkrkspsdlwkedlatfieeleaveakekqdeq >4fnc_A:Uracil-DNA_glycosylase-like; title=HUMAN TDG IN A POST-REACTIVE COMPLEX WITH 5-HYDROXYMETHYLURACIL (5HMU) organism=Homo sapiens DNA sequence DC(C1):DG(D28) DA(C2):DT(D27) DG(C3):DC(D26) DC(C4):DG(D25) DT(C5):DA(D24) DC(C6):DG(D23) DT(C7):DA(D22) DG(C8):DC(D21) DT(C9):DA(D20) DA(C10):DT(D19) DC(C11):DG(D18) DT(C13):DA(D16) DG(C14):DC(D15) DA(C15):DT(D14) DG(C16):DC(D13) DC(C17):DG(D12) DA(C18):DT(D11) DG(C19):DC(D10) DT(C20):DA(D9) DG(C21):DC(D8) DG(C22):DC(D7) DA(C23):DT(D6) DC(C24):DG(D5) DA(C25):DT(D4) DG(C26):DC(D3) DC(C27):DG(D2) DT(C28):DA(D1) chainA ( 91) SER200 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) LYS201 0 0 0 0 0 0 0 0 2 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ALA274 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ARG275 0 0 0 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ALA277 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) GLN278 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sfngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnHfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARcAQfpraqdkvhyyiklkdlrdqlkgiern >4fs1_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=BASE PAIRING MECHANISM OF N2,3-ETHENOGUANINE WITH DTTP BY HUMAN POLYMERASE IOTA organism=HOMO SAPIENS DNA sequence DA(B7):DT(C847) DG(B8):DC(C846) DG(B9):DC(C845) DA(B10):DT(C844) DC(B11):DG(C843) DC(B12):DG(C842) chainA (280) GLU305 0 0 0 0 0 3 (318) ARG343 2 1 0 0 0 0 (336) GLN361 2 0 0 0 0 0 prot.sequence ssrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssekhygresrQcpipshviqydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >4fs2_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=BASE PAIRING MECHANISM OF N2,3-ETHENOGUANINE WITH DCTP BY HUMAN POLYMERASE IOTA organism=HOMO SAPIENS DNA sequence DG(C842):DC(B12) DG(C843):DC(B11) DT(C844):DA(B10) DC(C845):DG(B9) DC(C846):DG(B8) DT(C847):DA(B7) chainA (276) SER301 0 0 1 0 0 0 (280) GLU305 2 0 0 0 0 0 (318) ARG343 0 0 0 0 1 2 (336) GLN361 0 0 0 0 0 1 prot.sequence ssrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqSfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirryssekhygresrQcpipshviqkdvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >4fth_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF NTRC4 DNA-BINDING DOMAIN BOUND TO DOUBLE- STRANDED DNA organism=Aquifex aeolicus DNA sequence DA(D2):DT(C21) DT(D3):DA(C20) DG(D4):DC(C19) DC(D5):DG(C18) DA(D6):DT(C17) DT(D7):DA(C16) DT(D8):DA(C15) DT(D9):DA(C14) DG(D10):DC(C13) DC(D11):DG(C12) DA(D12):DT(C11) DA(D13):DT(C10) DA(D14):DT(C9) DT(D15):DA(C8) DT(D16):DA(C7) DT(D17):DA(C6) DG(D18):DC(C5) DC(D19):DG(C4) DA(D20):DT(C3) DA(D21):DT(C2) chainA ( 51) ASP61 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 ( 52) LEU62 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) SER63 0 0 0 0 0 0 2 5 4 2 0 0 0 0 0 0 0 0 0 0 ( 54) ASN64 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 ( 56) TYR66 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG67 0 0 0 0 0 0 0 8 4 7 7 0 0 0 0 0 0 0 0 0 ( 60) LYS70 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lkekswrdlsyllkikelkeakkefekifieeklreydydlkrtaeeigiDLSNlYRkiKslnirvks >4fth_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF NTRC4 DNA-BINDING DOMAIN BOUND TO DOUBLE- STRANDED DNA organism=Aquifex aeolicus DNA sequence DT(C2):DA(D21) DT(C3):DA(D20) DG(C4):DC(D19) DC(C5):DG(D18) DA(C6):DT(D17) DA(C7):DT(D16) DA(C8):DT(D15) DT(C9):DA(D14) DT(C10):DA(D13) DT(C11):DA(D12) DG(C12):DC(D11) DC(C13):DG(D10) DA(C14):DT(D9) DA(C15):DT(D8) DA(C16):DT(D7) DT(C17):DA(D6) DG(C18):DC(D5) DC(C19):DG(D4) DA(C20):DT(D3) DT(C21):DA(D2) chainA ( 51) ASP61 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 ( 52) LEU62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 53) SER63 0 0 0 0 0 0 0 0 0 0 2 4 5 2 0 0 0 0 0 0 ( 54) ASN64 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 ( 56) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 ( 57) ARG67 0 0 0 0 0 0 0 0 0 7 7 4 8 0 0 0 0 0 0 0 ( 60) LYS70 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainB ( 45) ASP61 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) SER63 1 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ASN64 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) TYR66 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG67 0 13 7 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lkekswrdlsyllkikelkeakkefekifieeklreydydlkrtaeeigiDLSNlYRkiKslnirvks/rdlsyllkikelkeakkefekifieeklreydydlkrtaeeigiDlSNlYRkikslnirvk >4fx4_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF M. TUBERCULOSIS TRANSCRIPTIONAL REGULATOR MOSR (RV1049) IN COMPEX WITH DNA organism=Mycobacterium tuberculosis DNA sequence DG(D5):DC(C26) DA(D6):DT(C25) DT(D7):DA(C24) DT(D8):DA(C23) DC(D9):DG(C22) DG(D10):DC(C21) DT(D11):DA(C20) DG(D12):DC(C19) DT(D13):DA(C18) DA(D14):DT(C17) DG(D15):DC(C16) DC(D16):DG(C15) DT(D17):DA(C14) DA(D18):DT(C13) DC(D19):DG(C12) DA(D20):DT(C11) DC(D21):DG(C10) DG(D22):DC(C9) DA(D23):DT(C8) DA(D24):DT(C7) DT(D25):DA(C6) DC(D26):DG(C5) DT(D27):DA(C4) chainA ( 59) ARG70 0 0 0 0 24 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) THR71 0 0 0 0 0 2 5 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) THR72 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG75 0 0 0 0 0 0 13 13 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ASN76 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 54) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 21 0 0 0 0 0 ( 55) THR71 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 6 0 0 0 0 0 0 0 ( 56) THR72 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 ( 59) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 1 9 13 11 0 0 0 0 0 0 0 ( 60) ASN76 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 79) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 8 3 0 prot.sequence ecacyttrraarqlgqaydralrpsgltntqfstlavislsegsdltmselaarigveRTTltRNlevmrrdglvrvmagckrieltakgraalqkavplwrgvqaevtawprvrrdianlgqaaeac/ecacyttrraarqlgqaydralrpsgltntqfstlavislstmselaarigveRTTltRNlevmrrdglvrvmagadaRckrieltakgraalqkavplwrgvqaevtasvgdwprvrrdianlgqaaeacrl >4fx4_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF M. TUBERCULOSIS TRANSCRIPTIONAL REGULATOR MOSR (RV1049) IN COMPEX WITH DNA organism=Mycobacterium tuberculosis DNA sequence DA(C4):DT(D27) DG(C5):DC(D26) DA(C6):DT(D25) DT(C7):DA(D24) DT(C8):DA(D23) DC(C9):DG(D22) DG(C10):DC(D21) DT(C11):DA(D20) DG(C12):DC(D19) DT(C13):DA(D18) DA(C14):DT(D17) DG(C15):DC(D16) DC(C16):DG(D15) DT(C17):DA(D14) DA(C18):DT(D13) DC(C19):DG(D12) DA(C20):DT(D11) DC(C21):DG(D10) DG(C22):DC(D9) DA(C23):DT(D8) DA(C24):DT(D7) DT(C25):DA(D6) DC(C26):DG(D5) chainB ( 54) ARG70 0 0 0 0 0 21 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR71 0 0 0 0 0 0 0 6 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) THR72 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG75 0 0 0 0 0 0 0 11 13 9 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ASN76 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ARG95 0 3 8 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ecacyttrraarqlgqaydralrpsgltntqfstlavislstmselaarigveRTTltRNlevmrrdglvrvmagadaRckrieltakgraalqkavplwrgvqaevtasvgdwprvrrdianlgqaaeacrl >4fxd_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF YEAST DNA POLYMERASE ALPHA BOUND TO DNA/RNA organism=Saccharomyces cerevisiae DNA sequence DC(C1) DT(C2) DG(C3) DC(C4) DC(C5) DC(C6) DG(C7) DC(C8) chainA (443) ARG793 2 0 0 0 0 0 0 0 prot.sequence tfqmfwldycevnntlilfgkvklkddncvsamvqinglcrelfflpregktptdiheeiipllmdkygldnirakpqkmkysfelpdipsesdylkvllpyqtpkssrdtipsdlssdtfyhvfggnsnifesfviqnrimgpcwldikgadfnsirnashcavevsvdkpqnitptttktmpnlrclslsiqtlmnpkenkqeivsitlsayrnisldspipenikpddlctlvrppqstsfplglaalakqklpgrvrlfnnekamlscfcamlkvedpdviighrlqnvyldvlahrmhdlniptfssigrrlrrtwpekfgrgnsnmnhffisdicsgrlicdianemgqsltpkcqswdlsemyqvtcekehkpldidyqnpqyqndvnsmtmalqenitncmisaevsyriqlltltkqltnlagnawaqtlggtRagrneyillhefsrngfivpdkvfepekglhknyvlvmdfnslypsiiqefnicfttvdrnkedidelpsvppsevdqgvlprllanlvdrrrevkkvmktetdphkrvqcdirqqalkltansmygclgyvnsrfyakplamlvtnkgreilmntrqlaesmnllvvygdtdsvmidtgcdnyadaikiglgfkrlvneryrlleididnvfkklllhakkkyaaltvnldkngngttvlevkgldmkrrefcplsrdvsihvlntilsdkdpeealqevydyledirikvetnniridkykinmklskdpkaypggknmpavqvalrmrkagrvvkagsvitfvitklsvaerahalnevmiksnnlipdpqyylekqifapverlleridsfnvvrlsealg >4fzx_CD:Ribonuclease_H-like; title=EXONUCLEASE X IN COMPLEX WITH 3' OVERHANGING DUPLEX DNA organism=Escherichia coli DNA sequence DC(A1):DG(B15) DG(A2):DC(B14) DG(A3):DC(B13) DA(A4):DT(B12) DT(A5):DA(B11) DC(A6):DG(B10) DC(A7):DG(B9) DA(A8):DT(B8) DC(A9):DG(B7) DA(A10):DT(B6) DA(A11):DT(B5) DT(A12):DA(B4) DG(A13):DC(B3) DA(A14):DT(B2) DC(A15):DG(B1) chainC ( 81) ASN81 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 81) ASN81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (100) MET100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (104) ARG104 0 0 0 0 0 0 0 0 0 0 0 3 9 2 0 (112) TYR112 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 prot.sequence mlriidtetcglqggiveiasvdvidgkivnpmshlvrpdrpispqamaihriteamvadkpwiedviphyygsewyvahNasfdrrvlpempgewictmklaRrlwpgikysnmalyktrklnvqtppglhhhralydcyitaallidimntsgwtaeqmaditg/mlriidtetcglqggiveiasvdvidgkivnpmshlvrpdrpispqamaihriteamvadkpwiedviphyygsewyvahNasfdrrvlpempgewictMklaRrlwpgikYsnmalyktrklnvqtppglhhhralydcyitaallidimntsgwtaeqmaditg >4fzx_D:Ribonuclease_H-like; title=EXONUCLEASE X IN COMPLEX WITH 3' OVERHANGING DUPLEX DNA organism=Escherichia coli DNA sequence DG(B1):DC(A15) DT(B2):DA(A14) DC(B3):DG(A13) DA(B4):DT(A12) DT(B5):DA(A11) DT(B6):DA(A10) DG(B7):DC(A9) DT(B8):DA(A8) DG(B9):DC(A7) DG(B10):DC(A6) DA(B11):DT(A5) DT(B12):DA(A4) DC(B13):DG(A3) DC(B14):DG(A2) DG(B15):DC(A1) chainD ( 81) ASN81 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) MET100 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ARG104 0 2 9 3 0 0 0 0 0 0 0 0 0 0 0 (112) TYR112 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlriidtetcglqggiveiasvdvidgkivnpmshlvrpdrpispqamaihriteamvadkpwiedviphyygsewyvahNasfdrrvlpempgewictMklaRrlwpgikYsnmalyktrklnvqtppglhhhralydcyitaallidimntsgwtaeqmaditg >4fzy_AB:Ribonuclease_H-like; title=EXONUCLEASE X IN COMPLEX WITH 12BP BLUNT-ENDED DSDNA organism=Escherichia coli DNA sequence DG(C2):DC(D11) DT(C3):DA(D10) DA(C4):DT(D9) DG(C5):DC(D8) DA(C6):DT(D7) DT(C7):DA(D6) DT(C8):DA(D5) DC(C9):DG(D4) DG(C10):DC(D3) DA(C11):DT(D2) DG(C12):DC(D1) chainA ( 12) LEU12 0 0 0 0 0 0 0 0 0 18 22 ( 46) GLN46 0 0 0 0 0 0 0 0 0 0 7 ( 50) ILE50 0 0 0 0 0 0 0 0 0 0 10 ( 81) ASN81 0 0 0 0 0 0 0 0 0 1 0 ( 84) PHE84 0 0 0 0 0 0 0 0 0 1 0 chainB ( 12) LEU12 29 0 0 0 0 0 0 0 0 0 0 ( 13) GLN13 2 0 0 0 0 0 0 0 0 0 0 ( 81) ASN81 3 6 0 0 0 0 0 0 0 0 0 ( 84) PHE84 6 0 0 0 0 0 0 0 0 0 0 ( 87) ARG87 3 3 0 0 0 0 0 0 0 0 0 prot.sequence mlriidtetcgLqggiveiasvdvidgkivnpmshlvrpdrpispQamaIhriteamvadkpwiedviphyygsewyvahNasFdrrvlpempgewictmklarrlwpgikysnmalyktrklnvqtppglhhhralydcyitaallidimntsgwtaeqmaditgr/mlriidtetcgLQggiveiasvdvidgkivnpmshlvrpdrpispqamaihriteamvadkpwiedviphyygsewyvahNasFdrRvlpempgewictmklarrlwpgikysnmalyktrklnvqtppglhhhralydcyitaallidimntsgwtaeqmaditg >4fzy_B:Ribonuclease_H-like; title=EXONUCLEASE X IN COMPLEX WITH 12BP BLUNT-ENDED DSDNA organism=Escherichia coli DNA sequence DC(D1):DG(C12) DT(D2):DA(C11) DC(D3):DG(C10) DG(D4):DC(C9) DA(D5):DT(C8) DA(D6):DT(C7) DT(D7):DA(C6) DC(D8):DG(C5) DT(D9):DA(C4) DA(D10):DT(C3) DC(D11):DG(C2) chainB ( 12) LEU12 0 0 0 0 0 0 0 0 0 0 29 ( 13) GLN13 0 0 0 0 0 0 0 0 0 0 2 ( 81) ASN81 0 0 0 0 0 0 0 0 0 6 3 ( 84) PHE84 0 0 0 0 0 0 0 0 0 0 6 ( 87) ARG87 0 0 0 0 0 0 0 0 0 3 3 prot.sequence mlriidtetcgLQggiveiasvdvidgkivnpmshlvrpdrpispqamaihriteamvadkpwiedviphyygsewyvahNasFdrRvlpempgewictmklarrlwpgikysnmalyktrklnvqtppglhhhralydcyitaallidimntsgwtaeqmaditg >4fzz_AB:Ribonuclease_H-like; title=EXONUCLEASE X IN COMPLEX WITH 5' OVERHANGING DUPLEX DNA organism=Escherichia coli DNA sequence DG(D2):DA(C11) DT(D3):DG(C10) DG(D4):DC(C9) DG(D5):DC(C8) DA(D6):DT(C7) DT(D7):DA(C6) DC(D8):DG(C5) DC(D9):DG(C4) DG(D10):DT(C3) DA(D11):DG(C2) chainA ( 12) LEU12 31 0 0 0 0 0 0 0 0 0 ( 13) GLN13 3 0 0 0 0 0 0 0 0 0 ( 81) ASN81 3 1 0 0 0 0 0 0 0 0 ( 84) PHE84 1 0 0 0 0 0 0 0 0 0 ( 87) ARG87 1 0 0 0 0 0 0 0 0 0 chainB ( 12) LEU12 0 0 0 0 0 0 0 0 0 29 ( 13) GLN13 0 0 0 0 0 0 0 0 0 3 ( 81) ASN81 0 0 0 0 0 0 0 0 1 3 ( 84) PHE84 0 0 0 0 0 0 0 0 0 1 ( 87) ARG87 0 0 0 0 0 0 0 0 0 1 prot.sequence mlriidtetcgLQggiveiasvdvidgkivnpmshlvrpdrpispqamaihriteamvadkpwiedviphyygsewyvahNasFdrRvlpempgewictmklarrlwpgikysnmalyktrklnvqtppglhhhralydcyitaallidimntsgwtaeqmaditg/mlriidtetcgLQggiveiasvdvidgkivnpmshlvrpdrpispqamaihriteamvadkpwiedviphyygsewyvahNasFdrRvlpempgewictmklarrlwpgikysnmalyktrklnvqtppglhhhralydcyitaallidimntsgwtaeqmaditg >4fzz_B:Ribonuclease_H-like; title=EXONUCLEASE X IN COMPLEX WITH 5' OVERHANGING DUPLEX DNA organism=Escherichia coli DNA sequence DG(D2):DA(C11) DT(D3):DG(C10) DG(D4):DC(C9) DG(D5):DC(C8) DA(D6):DT(C7) DT(D7):DA(C6) DC(D8):DG(C5) DC(D9):DG(C4) DG(D10):DT(C3) DA(D11):DG(C2) chainB ( 12) LEU12 0 0 0 0 0 0 0 0 0 29 ( 13) GLN13 0 0 0 0 0 0 0 0 0 3 ( 81) ASN81 0 0 0 0 0 0 0 0 1 3 ( 84) PHE84 0 0 0 0 0 0 0 0 0 1 ( 87) ARG87 0 0 0 0 0 0 0 0 0 1 prot.sequence mlriidtetcgLQggiveiasvdvidgkivnpmshlvrpdrpispqamaihriteamvadkpwiedviphyygsewyvahNasFdrRvlpempgewictmklarrlwpgikysnmalyktrklnvqtppglhhhralydcyitaallidimntsgwtaeqmaditg >4g0r_A:ssDNA_viruses; title=STRUCTURAL CHARACTERIZATION OF H-1 PARVOVIRUS: COMPARISON OF INFECTIOUS VIRIONS TO REPLICATION DEFECTIVE PARTICLES organism=H-1 PARVOVIRUS DNA sequence DC(C1) DT(C2) DG(C3) DA(C4) DC(C5) DT(C6) DT(C7) DC(C8) DA(C9) DA(C10) chainA (109) LEU146 0 3 0 0 0 0 0 0 0 0 (111) GLN148 0 4 0 0 0 0 0 0 0 0 (145) LEU184 0 13 0 0 0 0 0 0 0 0 (147) SER186 0 1 0 0 0 0 0 0 0 0 (233) THR272 0 11 0 0 0 0 0 0 0 0 (236) TYR275 0 3 27 0 0 0 0 0 0 0 (237) ILE276 0 0 4 0 0 0 0 0 0 0 (458) ASN497 0 0 9 4 0 0 0 0 1 0 (459) ASN498 0 0 1 3 0 0 0 0 0 0 (461) PRO500 0 3 0 0 0 0 0 0 0 0 prot.sequence gigvstgtydnqttykflgdgwveitahasrllhlgmppsenycrvtvhnnqttghgtkvkgnmayddthqqiwtpwslvdanawgvwfqpsdwqfiqnsmeslnldsLsQelfnvvvktvteqqgagaikvynndltacmmvaLdSnnilpytpaaqtsetlgfypwkptapapyryyffmprqlsvtssnsaegtqitdtigepqalnsqfftientlpitllrtgdeftTgtYIfntdplklthtwqtnrhlgmppritdlptsdtatasltangdrfgstqtqnvnyvtealrtrpaqigfmqphdnfeanrggpfkvpvvplditagedhdangairfnygkqhgedwakqgaaperytwdaidsaagrdtarcfvqsapisippnqnqilqredaiagrtnmhytnvfnsygplsafphpdpiypngqiwdkeldlehkprlhvtapfvckNNpPgqlfvrlgpnltdqfdpnsttvsrivtystfywkgilkfkaklrpnltwnpvyqattdsvansymnvkkwlpsatgnmhsdplicrpvphmty >4g0u_AB:Type_II_DNA_topoisomerase; title=HUMAN TOPOISOMERASE IIBETA IN COMPLEX WITH DNA AND AMSACRINE organism=Homo sapiens DNA sequence DA(E1):DT(D20) DG(E2):DC(D19) DC(E3):DG(D18) DC(E4):DG(D17) DG(E5):DC(D16) DA(E6):DT(D15) DG(E7):DC(D14) DC(E8):DG(D13) DT(F9):DA(D12) DG(F10):DC(D11) DC(F11):DG(D10) DA(F12):DT(D9) DG(F13):DC(C8) DC(F14):DG(C7) DT(F15):DA(C6) DC(F16):DG(C5) DG(F17):DC(C4) DG(F18):DC(C3) DC(F19):DG(C2) DT(F20):DA(C1) chainA ( 49) ARG503 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 51) LYS505 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 (255) GLN778 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 (256) ALA779 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (297) ARG820 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 (347) GLU870 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (349) ILE872 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 20 0 0 0 (354) ALA877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainB ( 51) ARG503 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 53) LYS505 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 (269) GLN778 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 (270) ALA779 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) ARG820 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 (361) GLU870 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (363) ILE872 0 0 0 21 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) ALA877 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pklddandaggkhslectliltegdsakslavsglgvigrdrygvfplRgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefiterhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlkhltyndfinkelilfsnsDneRsipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeQAlmmtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspRyiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaEgIgtgwAcklpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngtdktpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqegpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered/gipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplRgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitakeakeyfadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrltkhltyndfinkelilfsnsDneRSipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeQAlmmtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspRyiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaEgIgtgwAcKlpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngtdktpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqgpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >4g0u_B:Type_II_DNA_topoisomerase; title=HUMAN TOPOISOMERASE IIBETA IN COMPLEX WITH DNA AND AMSACRINE organism=Homo sapiens DNA sequence DA(E1):DT(D20) DG(E2):DC(D19) DC(E3):DG(D18) DC(E4):DG(D17) DG(E5):DC(D16) DA(E6):DT(D15) DG(E7):DC(D14) DC(E8):DG(D13) DT(F9):DA(D12) DG(F10):DC(D11) DC(F11):DG(D10) DA(F12):DT(D9) DG(F13):DC(C8) DC(F14):DG(C7) DT(F15):DA(C6) DC(F16):DG(C5) DG(F17):DC(C4) DG(F18):DC(C3) DC(F19):DG(C2) DT(F20):DA(C1) chainB ( 51) ARG503 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 53) LYS505 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 (269) GLN778 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 (270) ALA779 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) ARG820 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 (361) GLU870 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (363) ILE872 0 0 0 21 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) ALA877 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplRgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitakeakeyfadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrltkhltyndfinkelilfsnsDneRSipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeQAlmmtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspRyiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaEgIgtgwAcKlpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngtdktpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqgpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >4g0v_AB:Type_II_DNA_topoisomerase; title=HUMAN TOPOISOMERASE IIBETA IN COMPLEX WITH DNA AND MITOXANTRONE organism=Homo sapiens DNA sequence DA(C1):DT(F20) DG(C2):DC(F19) DC(C3):DG(F18) DC(C4):DG(F17) DG(C5):DC(F16) DA(C6):DT(F15) DG(C7):DC(F14) DC(C8):DG(F13) DT(D9):DA(F12) DG(D10):DC(F11) DC(D11):DG(F10) DA(D12):DT(F9) DG(D13):DC(E8) DC(D14):DG(E7) DT(D15):DA(E6) DC(D16):DG(E5) DG(D17):DC(E4) DG(D18):DC(E3) DC(D19):DG(E2) DT(D20):DA(E1) chainA ( 52) ARG503 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 ( 54) LYS505 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 (263) GLN778 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 (264) ALA779 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ILE872 0 0 0 22 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (362) ALA877 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 55) ARG503 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 ( 57) LYS505 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 (271) GLN778 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 (272) ALA779 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (313) ARG820 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (365) ILE872 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 19 0 0 0 (370) ALA877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence kgipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplRgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitdmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlhglkhltyndfinkelilfsnsDneRSipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeQAlmmtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspryiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaegIgtgwAcKlpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngtdktpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqegpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered/skikgipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplRgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefiakeakeyfadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlkhltyndfinkelilfsnsDneRSipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeQAlmMtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspRyiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaegIgtgwAcklpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqgpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >4g0v_B:Type_II_DNA_topoisomerase; title=HUMAN TOPOISOMERASE IIBETA IN COMPLEX WITH DNA AND MITOXANTRONE organism=Homo sapiens DNA sequence DA(E1):DT(D20) DG(E2):DC(D19) DC(E3):DG(D18) DC(E4):DG(D17) DG(E5):DC(D16) DA(E6):DT(D15) DG(E7):DC(D14) DC(E8):DG(D13) DT(F9):DA(D12) DG(F10):DC(D11) DC(F11):DG(D10) DA(F12):DT(D9) DG(F13):DC(C8) DC(F14):DG(C7) DT(F15):DA(C6) DC(F16):DG(C5) DG(F17):DC(C4) DG(F18):DC(C3) DC(F19):DG(C2) DT(F20):DA(C1) chainB ( 55) ARG503 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 ( 57) LYS505 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 (271) GLN778 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 (272) ALA779 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) ARG820 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (365) ILE872 0 0 0 19 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ALA877 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence skikgipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplRgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefiakeakeyfadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlkhltyndfinkelilfsnsDneRSipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeQAlmMtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspRyiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaegIgtgwAcklpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqgpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >4g0w_A:Type_II_DNA_topoisomerase; title=HUMAN TOPOISOMERASE IIBETA IN COMPLEX WITH DNA AND AMETANTRONE organism=Homo sapiens DNA sequence DA(C1):DT(F20) DG(C2):DC(F19) DC(C3):DG(F18) DC(C4):DG(F17) DG(C5):DC(F16) DA(C6):DT(F15) DG(C7):DC(F14) DC(C8):DG(F13) DT(D9):DA(F12) DG(D10):DC(F11) DC(D11):DG(F10) DA(D12):DT(F9) DG(D13):DC(E8) DC(D14):DG(E7) DT(D15):DA(E6) DC(D16):DG(E5) DG(D17):DC(E4) DG(D18):DC(E3) DC(D19):DG(E2) DT(D20):DA(E1) chainA ( 52) ARG503 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 0 0 ( 54) LYS505 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 (264) GLN778 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 (265) ALA779 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ARG820 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (358) ILE872 0 0 0 22 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (363) ALA877 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kgipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplRgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlhglkhltyndfinkelilfsnsDneRSipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeQAlmmtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspRyiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaegIgtgwAcklpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngtdktpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqegpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >4g0w_AB:Type_II_DNA_topoisomerase; title=HUMAN TOPOISOMERASE IIBETA IN COMPLEX WITH DNA AND AMETANTRONE organism=Homo sapiens DNA sequence DA(E1):DT(D20) DG(E2):DC(D19) DC(E3):DG(D18) DC(E4):DG(D17) DG(E5):DC(D16) DA(E6):DT(D15) DG(E7):DC(D14) DC(E8):DG(D13) DT(F9):DA(D12) DG(F10):DC(D11) DC(F11):DG(D10) DA(F12):DT(D9) DG(F13):DC(C8) DC(F14):DG(C7) DT(F15):DA(C6) DC(F16):DG(C5) DG(F17):DC(C4) DG(F18):DC(C3) DC(F19):DG(C2) DT(F20):DA(C1) chainA ( 52) ARG503 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 ( 54) LYS505 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 (264) GLN778 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (265) ALA779 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (306) ARG820 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (358) ILE872 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 22 0 0 0 (363) ALA877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainB ( 55) ARG503 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 ( 57) LYS505 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 (172) LYS671 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) GLN778 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 (270) ALA779 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) GLU870 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (363) ILE872 0 0 0 24 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) ALA877 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kgipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplRgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlhglkhltyndfinkelilfsnsDneRSipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeQAlmmtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspRyiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaegIgtgwAcklpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngtdktpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqegpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered/skikgipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplRgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitpfadmerhrilfryagpeddaaitlafsKkkiddrkewltnfmedrrqrrlhgtkhltyndfinkelilfsnsDneRSipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeQAlmmtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspryiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaEgIgtgwAcklpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqgpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >4g3i_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF DPO4 IN COMPLEX WITH DNA DUPLEX organism=Sulfolobus solfataricus DNA sequence DG(F5):DC(E13) DG(F6):DC(E12) DC(F7):DG(E11) DT(F8):DA(E10) DA(F9):DT(E9) DA(F11):DT(E8) DG(F12):DC(E7) chainB ( 32) VAL32 4 0 0 0 0 0 0 ( 42) ALA42 6 0 0 0 0 0 0 ( 44) ALA44 2 0 0 0 0 0 0 ( 57) ALA57 5 0 0 0 0 0 0 ( 76) MET76 1 0 0 0 0 0 0 (295) ILE295 0 0 0 0 3 0 0 (332) ARG332 0 4 0 0 0 0 0 (336) ARG336 0 0 0 11 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvAtanyearkfgvkAgipiveakkilpnavylpMrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldIvsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >4g4n_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM CONTAINING M77A MUTATION BOUND TO UNDAMAGED DNA organism=Geobacillus stearothermophilus DNA sequence DT(B4):DC(C15) DA(B5):DA(C14) DG(B6):DT(C13) DA(B7):DC(C12) DC(B8):DG(C10) DT(B9):DA(C9) DC(B10):DG(C8) DG(B11):DC(C7) DG(B12):DC(C6) DA(B13):DT(C5) DC(B14):DG(C4) DG(B15):DC(C3) chainA ( 75) ARG76 0 0 0 0 2 9 0 0 0 0 0 0 (111) ARG112 0 0 0 0 0 0 4 13 5 0 0 0 (113) PHE114 0 0 0 0 0 22 25 0 0 0 0 0 (243) ARG264 0 0 0 0 1 4 0 0 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniiRhprdseafaarmigqtvrglerrgkflkflldrdalishlRaegryavasaleplephthvvfcftdgselryrdvRkFgtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >4g4q_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MUTM CONTAINING F114A MUTATION BOUND TO UNDAMAGED DNA organism=Geobacillus stearothermophilus DNA sequence DA(B5):DA(C14) DG(B6):DT(C13) DA(B7):DC(C12) DC(B8):DG(C10) DT(B9):DA(C9) DC(B10):DG(C8) DG(B11):DC(C7) DG(B12):DC(C6) DA(B13):DT(C5) DC(B14):DG(C4) chainA ( 75) ARG76 0 0 0 4 8 0 0 0 0 0 ( 76) MET77 0 0 0 0 0 3 0 0 0 0 (111) ARG112 0 0 0 0 0 3 15 2 0 0 (244) ARG264 0 0 0 1 6 0 0 0 0 0 prot.sequence pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkflkflldrdalishlRMegryavasaleplephthvvfcftdgselryrdvRkagtmhvyakeeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdeslfragilpgrpaaslsskeierlheemvatigeavmkhhlyvygrqgnpckrcgtpiektvvagRgthycprcqr >4g7h_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX organism=THERMUS THERMOPHILUS DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) chainC (414) GLU421 10 0 0 0 0 0 0 0 0 0 (415) ARG422 1 0 0 0 0 0 0 0 0 0 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvAPgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >4g7h_MNP: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX organism=THERMUS THERMOPHILUS DNA sequence DG(Q4):DC(R24) DC(Q5):DG(R23) DA(Q6):DT(R22) DT(Q7):DA(R21) DC(Q8):DG(R20) DC(Q9):DG(R19) DG(Q10):DC(R18) DT(Q11):DA(R17) DG(Q12):DC(R16) DA(Q13):DT(R15) chainM (414) GLU421 0 0 0 0 0 0 0 0 0 11 chainN chainP prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrEragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvApgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/tsdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >4g7o_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX CONTAINING 2 NT OF RNA organism=THERMUS THERMOPHILUS DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (414) GLU421 0 0 0 0 0 0 0 0 0 17 (415) ARG422 0 0 0 0 0 0 0 0 0 5 chainD (489) LYS491 0 0 1 0 0 0 0 0 0 0 chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarraKarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >4g7o_MNP: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX CONTAINING 2 NT OF RNA organism=THERMUS THERMOPHILUS DNA sequence DG(Q4):DC(R24) DC(Q5):DG(R23) DA(Q6):DT(R22) DT(Q7):DA(R21) DC(Q8):DG(R20) DC(Q9):DG(R19) DG(Q10):DC(R18) DT(Q11):DA(R17) DG(Q12):DC(R16) DA(Q13):DT(R15) chainM (414) GLU421 0 0 0 0 0 0 0 0 0 12 (415) ARG422 0 0 0 0 0 0 0 0 0 3 chainN (489) LYS491 0 0 1 0 0 0 0 0 0 0 chainP prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarraKarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmvagaaditqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieea/tsdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >4g7z_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX CONTAINING 5-BRU AT TEMPLATE-STRAND POSITION +1 organism=THERMUS THERMOPHILUS DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (414) GLU421 0 0 0 0 0 0 0 0 0 16 chainD (489) LYS491 0 0 1 0 0 0 0 0 0 0 chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrEragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarraKarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >4g7z_MNP: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX CONTAINING 5-BRU AT TEMPLATE-STRAND POSITION +1 organism=THERMUS THERMOPHILUS DNA sequence DT(R15):DA(Q13) DC(R16):DG(Q12) DA(R17):DT(Q11) DC(R18):DG(Q10) DG(R19):DC(Q9) DG(R20):DC(Q8) DA(R21):DT(Q7) DT(R22):DA(Q6) DG(R23):DC(Q5) DC(R24):DG(Q4) chainM (414) GLU421 18 0 0 0 0 0 0 0 0 0 (415) ARG422 2 0 0 0 0 0 0 0 0 0 chainN chainP prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvAPgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmvagaaditqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieea/tsdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >4g82_A:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF P73 DNA-BINDING DOMAIN TETRAMER BOUND TO A FULL RESPONSE-ELEMENT organism=Homo sapiens DNA sequence DG(E400):DC(F419) DA(E401):DT(F418) DA(E402):DT(F417) DC(E403):DG(F416) DA(E404):DT(F415) DT(E405):DA(F414) DG(E406):DC(F413) DT(E407):DA(F412) DT(E408):DA(F411) DC(E409):DG(F410) chainA (185) ALA296 0 0 1 0 0 0 0 0 0 0 (186) CYS297 0 0 2 0 0 0 0 0 0 0 (189) ARG300 0 0 1 13 13 0 0 0 0 0 prot.sequence hefipsntdypgphhfevtfqqsstaksatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >4g82_AB:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF P73 DNA-BINDING DOMAIN TETRAMER BOUND TO A FULL RESPONSE-ELEMENT organism=Homo sapiens DNA sequence DG(E400):DC(F419) DA(E401):DT(F418) DA(E402):DT(F417) DC(E403):DG(F416) DA(E404):DT(F415) DT(E405):DA(F414) DG(E406):DC(F413) DT(E407):DA(F412) DT(E408):DA(F411) DC(E409):DG(F410) chainA (185) ALA296 0 0 1 0 0 0 0 0 0 0 (186) CYS297 0 0 2 0 0 0 0 0 0 0 (189) ARG300 0 0 1 13 13 0 0 0 0 0 chainB (156) ARG268 0 0 0 4 1 0 0 0 0 0 (184) ALA296 0 0 0 0 0 0 0 1 0 0 (185) CYS297 0 0 0 0 0 0 0 2 0 0 (188) ARG300 0 0 0 0 0 11 12 2 0 0 prot.sequence hefipsntdypgphhfevtfqqsstaksatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq/efipsntdypgphhfevtfqqsstaksatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnRrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >4g83_AB:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF P73 DNA-BINDING DOMAIN TETRAMER BOUND TO A FULL RESPONSE-ELEMENT organism=Homo sapiens DNA sequence DG(E400):DC(F419) DA(E401):DT(F418) DA(E402):DT(F417) DC(E403):DG(F416) DC(E404):DG(F415) DG(E405):DC(F414) DG(E406):DC(F413) DT(E407):DA(F412) DT(E408):DA(F411) DC(E409):DG(F410) chainA (184) ALA296 0 0 1 0 0 0 0 0 0 0 (185) CYS297 0 0 2 0 0 0 0 0 0 0 (188) ARG300 0 0 3 11 0 0 0 0 0 0 chainB (184) ALA296 0 0 0 0 0 0 0 1 0 0 (188) ARG300 0 0 0 0 0 3 10 2 0 0 prot.sequence efipsntdypgphhfevtfqqsstaksatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyr/efipsntdypgphhfevtfqqsstaksatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricAcpgRdrkadedhyr >4g83_B:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF P73 DNA-BINDING DOMAIN TETRAMER BOUND TO A FULL RESPONSE-ELEMENT organism=Homo sapiens DNA sequence DG(F410):DC(E409) DA(F411):DT(E408) DA(F412):DT(E407) DC(F413):DG(E406) DC(F414):DG(E405) DG(F415):DC(E404) DG(F416):DC(E403) DT(F417):DA(E402) DT(F418):DA(E401) DC(F419):DG(E400) chainB (184) ALA296 0 0 1 0 0 0 0 0 0 0 (188) ARG300 0 0 2 10 3 0 0 0 0 0 prot.sequence efipsntdypgphhfevtfqqsstaksatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricAcpgRdrkadedhyr >4g92_A: title=CCAAT-BINDING COMPLEX FROM ASPERGILLUS NIDULANS WITH DNA organism=EMERICELLA NIDULANS DNA sequence DA(E3):DT(D25) DT(E4):DA(D24) DT(E5):DA(D23) DG(E6):DC(D22) DA(E7):DT(D21) DC(E8):DG(D20) DC(E9):DG(D19) DA(E10):DT(D18) DA(E11):DT(D17) DT(E12):DA(D16) DC(E13):DG(D15) DA(E14):DT(D14) DG(E15):DC(D13) DA(E16):DT(D12) DG(E17):DC(D11) DG(E18):DC(D10) DT(E19):DA(D9) DA(E20):DT(D8) DG(E21):DC(D7) DG(E22):DC(D6) DA(E23):DT(D5) DT(E24):DA(D4) DG(E25):DC(D3) chainA ( 42) ARG273 0 0 0 0 0 0 0 0 1 6 11 5 0 0 0 0 0 0 0 0 0 0 0 ( 45) HIS276 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG280 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG282 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG287 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) PHE288 0 0 0 0 0 0 29 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence splyvnakqfhrilkrrvarqkleeqlrltskgrkpylhesRhnHamrRpRgpggRFltad >4g92_ABC:Histone-fold;Leucine_zipper_domain; title=CCAAT-BINDING COMPLEX FROM ASPERGILLUS NIDULANS WITH DNA organism=ASPERGILLUS NIDULANS / EMERICELLA NIDULANS DNA sequence DC(D3):DG(E25) DA(D4):DT(E24) DT(D5):DA(E23) DC(D6):DG(E22) DC(D7):DG(E21) DT(D8):DA(E20) DA(D9):DT(E19) DC(D10):DG(E18) DC(D11):DG(E17) DT(D12):DA(E16) DC(D13):DG(E15) DT(D14):DA(E14) DG(D15):DC(E13) DA(D16):DT(E12) DT(D17):DA(E11) DT(D18):DA(E10) DG(D19):DC(E9) DG(D20):DC(E8) DT(D21):DA(E7) DC(D22):DG(E6) DA(D23):DT(E5) DA(D24):DT(E4) DT(D25):DA(E3) chainA ( 42) ARG273 0 0 0 0 0 0 0 0 0 0 0 5 11 6 1 0 0 0 0 0 0 0 0 ( 45) HIS276 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 ( 49) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 ( 51) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 ( 56) ARG287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 ( 57) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 29 0 0 0 0 0 0 chainB ( 11) ALA51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainC prot.sequence splyvnakqfhrilkrrvarqkleeqlrltskgrkpylhesRhnHamrRpRgpggRFltad/mkeqdrwlpiAnvarimklalpenaKiakeakecmqecvsefisfitseasekcqqekrktvngedilfamtslgfenyaealkiylskyre/gtwanvnqglQgtardilttywqhvInhlesdnhdykihqlplarikkvmkadpevkmisaeapilfakgcdvfiteltmrawihaednkrrtlqrsdiaaalsksdmfdflidivp >4g92_B:Histone-fold; title=CCAAT-BINDING COMPLEX FROM ASPERGILLUS NIDULANS WITH DNA organism=ASPERGILLUS NIDULANS DNA sequence DA(E3):DT(D25) DT(E4):DA(D24) DT(E5):DA(D23) DG(E6):DC(D22) DA(E7):DT(D21) DC(E8):DG(D20) DC(E9):DG(D19) DA(E10):DT(D18) DA(E11):DT(D17) DT(E12):DA(D16) DC(E13):DG(D15) DA(E14):DT(D14) DG(E15):DC(D13) DA(E16):DT(D12) DG(E17):DC(D11) DG(E18):DC(D10) DT(E19):DA(D9) DA(E20):DT(D8) DG(E21):DC(D7) DG(E22):DC(D6) DA(E23):DT(D5) DT(E24):DA(D4) DG(E25):DC(D3) chainB ( 11) ALA51 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkeqdrwlpiAnvarimklalpenaKiakeakecmqecvsefisfitseasekcqqekrktvngedilfamtslgfenyaealkiylskyre >4gat_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=SOLUTION NMR STRUCTURE OF THE WILD TYPE DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13BP DNA CONTAINING A CGATA SITE, REGULARIZED MEAN STRUCTURE organism=EMERICELLA NIDULANS DNA sequence DG(C114):DC(B113) DT(C115):DA(B112) DC(C116):DG(B111) DT(C117):DA(B110) DC(C118):DG(B109) DT(C119):DA(B108) DA(C120):DT(B107) DT(C121):DA(B106) DC(C122):DG(B105) DG(C123):DC(B104) DC(C124):DG(B103) DT(C125):DA(B102) DG(C126):DC(B101) chainA ( 22) LEU22 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 24) ARG24 0 0 0 0 0 0 0 2 14 0 0 0 0 ( 38) LEU38 0 0 0 0 0 0 8 6 0 0 0 0 0 ( 39) PHE39 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 42) LEU42 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkngeqngpttctncftqttpLwRrnpegqplcnacgLFlkLhgvvrplslktdvikkRnrnsans >4gc6_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF DPO4 IN COMPLEX WITH N-MC-DAMP OPPOSITE DT organism=Sulfolobus solfataricus P2 DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) DC(P13):DG(T6) DC(P14):DG(T5) chainA (332) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (336) ARG336 0 0 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >4gc7_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF DPO4 IN COMPLEX WITH S-MC-DADP OPPOSITE DT organism=Sulfolobus solfataricus P2 DNA sequence DG(F5):DC(E14) DG(F6):DC(E13) DA(F7):DT(E12) DA(F8):DT(E11) DT(F9):DA(E10) DC(F10):DG(E9) DC(F11):DG(E8) DT(F12):DA(E7) DT(F13):DA(E6) DC(F14):DG(E5) DC(F15):DG(E4) DC(F16):DG(E3) DC(F17):DG(E2) chainB (248) ILE248 0 1 0 0 0 0 0 0 0 0 0 0 0 (295) ILE295 0 0 0 1 0 0 0 0 0 0 0 0 0 (332) ARG332 5 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 1 4 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrIvtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldIvsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >4gck_A:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF NO-DNA COMPLEX organism=Klebsiella pneumoniae DNA sequence DG(Z23):DC(W13) DT(Z24):DA(W12) DG(Z25):DC(W11) DA(Z26):DT(W10) DG(Z27):DC(W9) DT(Z28):DA(W8) DA(Z29):DT(W7) DC(Z30):DG(W6) DT(Z31):DA(W5) DC(Z32):DG(W4) DA(Z33):DT(W3) DC(Z34):DG(W2) chainA ( 26) THR34 0 0 0 0 0 0 5 1 0 0 0 0 ( 36) SER44 0 0 0 0 0 0 0 0 0 0 4 0 ( 37) GLU45 0 0 0 0 0 0 2 11 0 0 0 0 ( 38) ALA46 0 0 0 0 0 0 0 0 1 3 6 0 ( 39) ALA47 0 0 0 0 0 0 0 0 0 0 1 0 ( 41) TYR49 0 0 0 0 0 0 0 6 3 0 0 0 ( 42) ARG50 0 0 0 0 0 0 0 0 0 0 2 8 prot.sequence rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllilgfgernpgltriltghalmfeqdrlqgrinqlferievqlrqvmrekkmregegytldetllasqllafcegmlsrfvrsefkyrptddfearwplvaaqlq >4gck_ABCD:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF NO-DNA COMPLEX organism=Klebsiella pneumoniae DNA sequence DG(W2):DC(Z34) DT(W3):DA(Z33) DG(W4):DC(Z32) DA(W5):DT(Z31) DG(W6):DC(Z30) DT(W7):DA(Z29) DA(W8):DT(Z28) DC(W9):DG(Z27) DT(W10):DA(Z26) DC(W11):DG(Z25) DA(W12):DT(Z24) DC(W13):DG(Z23) chainA ( 26) THR34 0 0 0 0 1 5 0 0 0 0 0 0 ( 36) SER44 0 4 0 0 0 0 0 0 0 0 0 0 ( 37) GLU45 0 0 0 0 11 2 0 0 0 0 0 0 ( 38) ALA46 0 6 3 1 0 0 0 0 0 0 0 0 ( 39) ALA47 0 1 0 0 0 0 0 0 0 0 0 0 ( 41) TYR49 0 0 0 3 6 0 0 0 0 0 0 0 ( 42) ARG50 8 2 0 0 0 0 0 0 0 0 0 0 chainB ( 25) THR34 0 0 0 0 0 0 0 0 0 0 2 1 ( 36) GLU45 0 0 0 0 0 0 0 0 0 0 3 9 ( 40) TYR49 0 0 0 0 0 0 0 0 0 0 0 8 chainC ( 26) THR34 0 0 0 0 0 0 4 1 0 0 0 0 ( 36) SER44 0 0 0 0 0 0 0 0 0 0 5 0 ( 37) GLU45 0 0 0 0 0 0 1 8 0 0 0 0 ( 38) ALA46 0 0 0 0 0 0 0 0 1 2 6 0 ( 39) ALA47 0 0 0 0 0 0 0 0 0 0 1 0 ( 41) TYR49 0 0 0 0 0 0 0 6 3 0 0 0 ( 42) ARG50 0 0 0 0 0 0 0 0 0 0 2 6 chainD ( 25) THR34 1 3 0 0 0 0 0 0 0 0 0 0 ( 36) GLU45 10 5 0 0 0 0 0 0 0 0 0 0 ( 40) TYR49 8 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllilgfgernpgltriltghalmfeqdrlqgrinqlferievqlrqvmrekkmregegytldetllasqllafcegmlsrfvrsefkyrptddfearwplvaaqlq/nrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllilgfgernpgltriltghalmfeqdrlqgrinqlferievqlrqvmrekkmregegytldetllasqllafcegmlsrfvrsefkyrptddfearwplvaaqlq/rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllilgfgernpgltriltghalmfeqdrlqgrinqlferievqlrqvmrekkmregegytldetllasqllafcegmlsrfvrsefkyrptddfearwplvaaqlq/nrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllilgfgernpgltriltghalmfeqdrlqgrinqlferievqlrqvmrekkmregegytldetllasqllafcegmlsrfvrsefkyrptddfearwplvaaqlq >4gcl_ABCD:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF NO-DNA FACTOR organism=Escherichia coli DNA sequence DA(Z22):DT(W14) DG(Z23):DC(W13) DT(Z24):DA(W12) DG(Z25):DC(W11) DA(Z26):DT(W10) DG(Z27):DC(W9) DT(Z28):DA(W8) DA(Z29):DT(W7) DC(Z30):DG(W6) DT(Z31):DA(W5) DC(Z32):DG(W4) DA(Z33):DT(W3) DC(Z34):DG(W2) DT(Z35):DA(W1) chainA ( 26) THR34 0 0 0 0 0 0 0 3 1 0 0 0 0 0 ( 36) SER44 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 37) GLU45 0 0 0 0 0 0 0 1 6 0 0 0 0 0 ( 38) ALA46 0 0 0 0 0 0 0 0 0 2 3 5 0 0 ( 39) ALA47 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 41) TYR49 0 0 0 0 0 0 0 0 8 3 0 0 0 0 ( 42) ARG50 0 0 0 0 0 0 0 0 0 0 0 1 16 16 chainB ( 32) THR34 0 1 5 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLU45 7 13 5 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA46 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR49 3 9 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 26) THR34 0 0 0 0 0 1 4 0 0 0 0 0 0 0 ( 36) SER44 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLU45 0 0 0 0 0 5 1 0 0 0 0 0 0 0 ( 38) ALA46 0 0 5 3 3 0 0 0 0 0 0 0 0 0 ( 39) ALA47 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR49 0 0 0 0 4 6 0 0 0 0 0 0 0 0 ( 42) ARG50 28 14 1 0 0 0 0 0 0 0 0 0 0 0 chainD ( 25) THR34 0 0 0 0 0 0 0 0 0 0 0 5 1 0 ( 36) GLU45 0 0 0 0 0 0 0 0 0 0 0 3 5 1 ( 37) ALA46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 40) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 8 7 prot.sequence rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyatdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq/aekqakrnrreeilqslalmlessdgsqritTaklaasvgvsEAalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyatdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq/rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyatdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq/nrreeilqslalmlessdgsqritTaklaasvgvsEAalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyatdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq >4gcl_C:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF NO-DNA FACTOR organism=Escherichia coli DNA sequence DA(W1):DT(Z35) DG(W2):DC(Z34) DT(W3):DA(Z33) DG(W4):DC(Z32) DA(W5):DT(Z31) DG(W6):DC(Z30) DT(W7):DA(Z29) DA(W8):DT(Z28) DC(W9):DG(Z27) DT(W10):DA(Z26) DC(W11):DG(Z25) DA(W12):DT(Z24) DC(W13):DG(Z23) DT(W14):DA(Z22) chainC ( 26) THR34 0 0 0 0 0 0 0 4 1 0 0 0 0 0 ( 36) SER44 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 37) GLU45 0 0 0 0 0 0 0 1 5 0 0 0 0 0 ( 38) ALA46 0 0 0 0 0 0 0 0 0 3 3 5 0 0 ( 39) ALA47 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 41) TYR49 0 0 0 0 0 0 0 0 6 4 0 0 0 0 ( 42) ARG50 0 0 0 0 0 0 0 0 0 0 0 1 14 28 prot.sequence rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyatdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq >4gcl_EGH:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF NO-DNA FACTOR organism=Escherichia coli DNA sequence DA(R1):DT(T35) DG(R2):DC(T34) DT(R3):DA(T33) DG(R4):DC(T32) DA(R5):DT(T31) DG(R6):DC(T30) DT(R7):DA(T29) DA(R8):DT(T28) DC(R9):DG(T27) DT(R10):DA(T26) DC(R11):DG(T25) DA(R12):DT(T24) DC(R13):DG(T23) DT(R14):DA(T22) chainE ( 26) THR34 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 36) SER44 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 37) GLU45 0 0 0 0 0 0 0 2 7 0 0 0 0 0 ( 38) ALA46 0 0 0 0 0 0 0 0 0 2 3 5 0 0 ( 39) ALA47 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 41) TYR49 0 0 0 0 0 0 0 0 7 4 0 0 0 0 ( 42) ARG50 0 0 0 0 0 0 0 0 0 0 0 2 15 12 chainG ( 26) THR34 0 0 0 0 0 3 4 0 0 0 0 0 0 0 ( 36) SER44 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLU45 0 0 0 0 0 6 1 0 0 0 0 0 0 0 ( 38) ALA46 0 0 5 2 2 0 0 0 0 0 0 0 0 0 ( 39) ALA47 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR49 0 0 0 0 2 9 0 0 0 0 0 0 0 0 ( 42) ARG50 20 16 3 0 0 0 0 0 0 0 0 0 0 0 chainH ( 26) THR34 0 0 0 0 0 0 0 0 0 0 0 4 1 0 ( 37) GLU45 0 0 0 0 0 0 0 0 0 0 0 7 11 3 ( 38) ALA46 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 41) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 9 4 prot.sequence rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyatdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq/rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyatdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq/rnrreeilqslalmlessdgsqritTaklaasvgvsEAalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyatdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq >4gct_ABCD:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF NO FACTOR PROTEIN-DNA COMPLEX organism=Vibrio cholerae O1 biovar El Tor DNA sequence DT(W1):DA(Z38) DT(W2):DA(Z37) DA(W3):DT(Z36) DC(W4):DG(Z35) DG(W5):DC(Z34) DT(W6):DA(Z33) DG(W7):DC(Z32) DA(W8):DT(Z31) DG(W9):DC(Z30) DT(W10):DA(Z29) DA(W11):DT(Z28) DC(W12):DG(Z27) DT(W13):DA(Z26) DC(W14):DG(Z25) DA(W15):DT(Z24) DC(W16):DG(Z23) DG(W17):DC(Z22) DT(W18):DA(Z21) DA(W19):DT(Z20) DA(W20):DT(Z19) chainA ( 26) THR32 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 36) SER42 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLU43 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 ( 38) ALA44 0 0 0 0 0 5 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ALA45 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR47 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG48 0 0 0 7 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) THR32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 ( 36) GLU43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 ( 37) ALA44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 ( 40) TYR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 ( 41) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 chainC ( 26) THR32 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 36) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 37) GLU43 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 ( 38) ALA44 0 0 0 0 0 0 0 0 0 0 0 0 1 2 5 0 0 0 0 0 ( 39) ALA45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 41) TYR47 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 ( 42) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 chainD ( 25) THR32 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER42 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLU43 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA44 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR47 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG48 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence inrreeilqalaemlesnegasritTaklakqvgvSEAAlYRhfpsktrmfegliefieeslmsrinrifdeekdtlnrirlvmqlllafaernpgltrilsghalmfenerlrdrinqlferietslrqilrerksfpvdenilaaqllgqvegslnrfvrsdfkylptanfdeywallsaqik/nrreeilqalaemlesnegasritTaklakqvgvsEAalYRhfpsktrmfegliefieeslmsrinrifdeekdtlnrirlvmqlllafaernpgltrilsghalmfenerlrdrinqlferietslrqilrerklregksfpvdenilaaqllgqvegslnrfvrsdfkylptanfdeywallsaqik/inrreeilqalaemlesnegasritTaklakqvgvSEAAlYRhfpsktrmfegliefieeslmsrinrifdeekdtlnrirlvmqlllafaernpgltrilsghalmfenerlrdrinqlferietslrqilrerklregksfpvdenilaaqllgqvegslnrfvrsdfkylptanfdeywallsaqik/nrreeilqalaemlesnegasritTaklakqvgvSEAalYRhfpsktrmfegliefieeslmsrinrifdeekdtlnrirlvmqlllafaernpgltrilsghalmfenerlrdrinqlferietslrqilrerklregksfpvdenilaaqllgqvegslnrfvrsdfkylptanfdeywallsaqik >4gct_D:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF NO FACTOR PROTEIN-DNA COMPLEX organism=Vibrio cholerae O1 biovar El Tor DNA sequence DT(W1):DA(Z38) DT(W2):DA(Z37) DA(W3):DT(Z36) DC(W4):DG(Z35) DG(W5):DC(Z34) DT(W6):DA(Z33) DG(W7):DC(Z32) DA(W8):DT(Z31) DG(W9):DC(Z30) DT(W10):DA(Z29) DA(W11):DT(Z28) DC(W12):DG(Z27) DT(W13):DA(Z26) DC(W14):DG(Z25) DA(W15):DT(Z24) DC(W16):DG(Z23) DG(W17):DC(Z22) DT(W18):DA(Z21) DA(W19):DT(Z20) DA(W20):DT(Z19) chainD ( 25) THR32 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER42 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLU43 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA44 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR47 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG48 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nrreeilqalaemlesnegasritTaklakqvgvSEAalYRhfpsktrmfegliefieeslmsrinrifdeekdtlnrirlvmqlllafaernpgltrilsghalmfenerlrdrinqlferietslrqilrerklregksfpvdenilaaqllgqvegslnrfvrsdfkylptanfdeywallsaqik >4gdf_A:P-loop_containing_nucleoside_triphosphate_hydrolases;Origin_of_replication-binding_domain,_RBD-like; title=A CRYSTAL STRUCTURE OF SV40 LARGE T ANTIGEN organism=Simian virus 40 DNA sequence DC(D1):DG(C32) DG(D2):DC(C31) DC(D3):DG(C30) DC(D4):DG(C29) DT(D5):DA(C28) DC(D6):DG(C27) DG(D7):DC(C26) DG(D8):DC(C25) DC(D9):DG(C24) DC(D10):DG(C23) DT(D11):DA(C22) DC(D12):DG(C21) DT(D13):DA(C20) DG(D14):DC(C19) DA(D15):DT(C18) DG(D16):DC(C17) DC(D17):DG(C16) DT(D18):DA(C15) DA(D19):DT(C14) DT(D20):DA(C13) DT(D21):DA(C12) DC(D22):DG(C11) DC(D23):DG(C10) DA(D24):DT(C9) DG(D25):DC(C8) DA(D26):DT(C7) DA(D27):DT(C6) DG(D28):DC(C5) DT(D29):DA(C4) DA(D30):DT(C3) DG(D31):DC(C2) DT(D32):DA(C1) chainA ( 21) PHE151 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) SER152 0 0 0 0 0 0 0 0 0 2 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ASN153 0 0 0 0 0 0 0 0 9 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG154 0 0 0 0 0 0 0 0 0 0 4 13 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) THR155 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG204 0 0 0 0 0 0 18 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) GLN267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) TRP270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (202) ASN332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (383) HIS513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 prot.sequence kvedpkdfpsellsflshavFSNRTlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphrhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpgglkehdfnpeeaeetkQvsWklvteyametkcddvllllgmylefqysfemclkcikkeqpshykyhekhyanaaifadskNqkticqqavdtvlakkrvdslqltreqmltnrfndlldrmdimfgstgsadieewmagvawlhcllpkmdsvvydflkcmvynipkkrywlfkgpidsgkttlaaallelcggkalnvnlpldrlnfelgvaidqflvvfedvkgtggesrdlpsgqginnldnlrdyldgsvkvnlekkHlnkrtqifppgivtmneysvpktlqarfvkqidfrpkdylkhclersefllekriiqsgialllmliwyrpvaefaqsiqsrivewkerldkefslsvyqkmkfnvamgigvld >4gdf_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;Origin_of_replication-binding_domain,_RBD-like; title=A CRYSTAL STRUCTURE OF SV40 LARGE T ANTIGEN organism=Simian virus 40 DNA sequence DA(C1):DT(D32) DC(C2):DG(D31) DT(C3):DA(D30) DA(C4):DT(D29) DC(C5):DG(D28) DT(C6):DA(D27) DT(C7):DA(D26) DC(C8):DG(D25) DT(C9):DA(D24) DG(C10):DC(D23) DG(C11):DC(D22) DA(C12):DT(D21) DA(C13):DT(D20) DT(C14):DA(D19) DA(C15):DT(D18) DG(C16):DC(D17) DC(C17):DG(D16) DT(C18):DA(D15) DC(C19):DG(D14) DA(C20):DT(D13) DG(C21):DC(D12) DA(C22):DT(D11) DG(C23):DC(D10) DG(C24):DC(D9) DC(C25):DG(D8) DC(C26):DG(D7) DG(C27):DC(D6) DA(C28):DT(D5) DG(C29):DC(D4) DG(C30):DC(D3) DC(C31):DG(D2) DG(C32):DC(D1) chainA ( 21) PHE151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 22) SER152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 2 0 0 0 0 0 0 0 0 0 ( 23) ASN153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 9 0 0 0 0 0 0 0 0 ( 24) ARG154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 13 4 0 0 0 0 0 0 0 0 0 0 ( 25) THR155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 74) ARG204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 18 0 0 0 0 0 0 (137) GLN267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) TRP270 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ASN332 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) HIS513 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ASN153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) THR155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) HIS513 0 0 0 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvedpkdfpsellsflshavFSNRTlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphrhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpgglkehdfnpeeaeetkQvsWklvteyametkcddvllllgmylefqysfemclkcikkeqpshykyhekhyanaaifadskNqkticqqavdtvlakkrvdslqltreqmltnrfndlldrmdimfgstgsadieewmagvawlhcllpkmdsvvydflkcmvynipkkrywlfkgpidsgkttlaaallelcggkalnvnlpldrlnfelgvaidqflvvfedvkgtggesrdlpsgqginnldnlrdyldgsvkvnlekkHlnkrtqifppgivtmneysvpktlqarfvkqidfrpkdylkhclersefllekriiqsgialllmliwyrpvaefaqsiqsrivewkerldkefslsvyqkmkfnvamgigvld/kvedpkdfpsellsflshavfsNRTlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphRhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpgglkehdfnpeeaeetkqvswklvteyametkcddvllllgmylefqysfemclkcikkeqpshykyhekhyanaaifadsknqkticqqavdtvlakkrvdslqltreqmltnrfndlldrmdimfgstgsadieewmagvawlhcllpkmdsvvydflkcmvynipkkrywlfkgpidsgkttlaaallelcggkalnvnlpldrlnfelgvaidqflvvfedvkgtggesrdlpsgqginnldnlrdyldgsvkvnlekkHlnkrtqifppgivtmneysvpktlqarfvkqidfrpkdylkhclersefllekriiqsgialllmliwyrpvaefaqsiqsrivewkerldkefslsvyqkmkfnvamgigvld >4gdf_EF:P-loop_containing_nucleoside_triphosphate_hydrolases;Origin_of_replication-binding_domain,_RBD-like; title=A CRYSTAL STRUCTURE OF SV40 LARGE T ANTIGEN organism=Simian virus 40 DNA sequence DA(G1):DT(H32) DC(G2):DG(H31) DT(G3):DA(H30) DA(G4):DT(H29) DC(G5):DG(H28) DT(G6):DA(H27) DT(G7):DA(H26) DC(G8):DG(H25) DT(G9):DA(H24) DG(G10):DC(H23) DG(G11):DC(H22) DA(G12):DT(H21) DA(G13):DT(H20) DT(G14):DA(H19) DA(G15):DT(H18) DG(G16):DC(H17) DC(G17):DG(H16) DT(G18):DA(H15) DC(G19):DG(H14) DA(G20):DT(H13) DG(G21):DC(H12) DA(G22):DT(H11) DG(G23):DC(H10) DG(G24):DC(H9) DC(G25):DG(H8) DC(G26):DG(H7) DG(G27):DC(H6) DA(G28):DT(H5) DG(G29):DC(H4) DG(G30):DC(H3) DC(G31):DG(H2) DG(G32):DC(H1) chainE ( 21) PHE151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 22) SER152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 ( 23) ASN153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 9 0 0 0 0 0 0 0 0 ( 24) ARG154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 13 4 0 0 0 0 0 0 0 0 0 0 ( 25) THR155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 74) ARG204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 17 0 0 0 0 0 0 (137) GLN267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) TRP270 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ASN332 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) HIS513 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ASN153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) THR155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) HIS513 0 0 0 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvedpkdfpsellsflshavFSNRTlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphrhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpgglkehdfnpeeaeetkQvsWklvteyametkcddvllllgmylefqysfemclkcikkeqpshykyhekhyanaaifadskNqkticqqavdtvlakkrvdslqltreqmltnrfndlldrmdimfgstgsadieewmagvawlhcllpkmdsvvydflkcmvynipkkrywlfkgpidsgkttlaaallelcggkalnvnlpldrlnfelgvaidqflvvfedvkgtggesrdlpsgqginnldnlrdyldgsvkvnlekkHlnkrtqifppgivtmneysvpktlqarfvkqidfrpkdylkhclersefllekriiqsgialllmliwyrpvaefaqsiqsrivewkerldkefslsvyqkmkfnvamgigvld/kvedpkdfpsellsflshavfsNRTlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphRhRvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpgglkehdfnpeeaeetkqvswklvteyametkcddvllllgmylefqysfemclkcikkeqpshykyhekhyanaaifadsknqkticqqavdtvlakkrvdslqltreqmltnrfndlldrmdimfgstgsadieewmagvawlhcllpkmdsvvydflkcmvynipkkrywlfkgpidsgkttlaaallelcggkalnvnlpldrlnfelgvaidqflvvfedvkgtggesrdlpsgqginnldnlrdyldgsvkvnlekkHlnkrtqifppgivtmneysvpktlqarfvkqidfrpkdylkhclersefllekriiqsgialllmliwyrpvaefaqsiqsrivewkerldkefslsvyqkmkfnvamgigvld >4gfb_A:Homeodomain-like; title=RAP1/DNA COMPLEX organism=Saccharomyces cerevisiae DNA sequence DG(C1):DC(D31) DT(C2):DA(D30) DG(C3):DC(D29) DT(C4):DT(D28) DG(C5):DT(D27) DA(C6):DG(D26) DA(C9):DT(D25) DC(C10):DG(D24) DC(C11):DG(D23) DA(C12):DT(D22) DC(C13):DG(D21) DA(C14):DT(D20) DC(C15):DG(D19) DA(C16):DT(D18) DA(C17):DT(D17) DC(C18):DG(D16) DA(C19):DT(D15) DC(C20):DG(D14) DC(C21):DG(D13) DC(C22):DG(D12) DA(C23):DT(D11) DC(C24):DG(D10) DA(C25):DT(D9) DC(C26):DG(D8) DA(C27):DT(D7) DC(C28):DG(D6) DC(C29):DG(D5) DA(C30):DT(D4) DG(C31):DC(D3) chainA ( 3) LYS360 0 0 0 0 0 0 0 0 0 0 0 0 5 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) HIS385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 12 5 0 0 0 0 0 0 0 0 ( 44) ASN401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 ( 45) SER402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 2 0 0 0 0 0 0 0 0 0 ( 48) HIS405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 ( 53) TYR410 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) LYS446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 (163) ASN539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (166) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 16 0 (167) ASP543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 (170) ARG546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 12 0 0 (171) LYS547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (202) THR578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (204) ARG580 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 28 0 0 0 0 (211) THR588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (212) PRO589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 8 0 0 0 0 0 0 0 (214) ASN591 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hnKasftdeedefildvvrknptrrttHtlydeishyvpnhtgNSiRHrfRvYlskrleyvyevdkfgklvrdddgnliktkvlppsiKrkfsadedytlaiavkkqfyrdlfqidpdtgrslitvpgsepnfaayrtqsrrgpiareffkhfaeehaahteNawRDrfRKfllaygiddyisyyeaekaqnrepepmknlTnRprpgvpTPgNynsa >4gfh_AF:Type_II_DNA_topoisomerase;ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase;Ribosomal_protein_S5_domain_2-like; title=TOPOISOMERASE II-DNA-AMPPNP COMPLEX organism=Saccharomyces cerevisiae DNA sequence DC(b1):DG(c15) DC(b2):DG(c14) DT(b3):DA(c13) DA(b4):DT(c12) DC(b5):DG(c11) DT(b6):DA(c10) DG(b7):DC(c9) DC(b8):DG(c8) DT(b9):DA(c7) DA(b10):DT(c6) DC(b11):DG(c5) DC(b12):DG(c4) DG(b13):DC(c3) DC(b14):DG(c2) DG(b15):DC(c1) chainA (442) LYS477 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 (700) GLN739 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (701) SER740 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (742) ARG781 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (791) GLU831 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (793) ILE833 0 0 0 0 0 0 20 16 0 0 0 0 0 0 0 (798) SER838 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainF (696) GLN739 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (738) ARG781 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 prot.sequence sasdkyqkisqlehilkrpdtyigsvetqeqlqwiydeetdcmieknvtivpglfkifdeilvnaadnkvrdpsmkridvnihaeehtievkndgkgipieihnkeniyipemifghlltssnydddekkvtggrngygaklcnifstefiletadlnvgqkyvqkwennmsichppkitsykkgpsytkvtfkpdltrfgmkeldndilgvmrrrvydingsvrdinvylngkslkirnfknyvelylksliptilyerinnrwevafavsdisfqqisfvnsiattmggthvnyitdqivkkiseilkkkkkksvksfqiknnmfifinclienpaftsqtkeqlttrvkdfgsrceipleyinkimktdlatrmfeiadanesritnypkledankagtkegykctlvltegdsalslavaglavvgrdyygcyplrgKmlnvreasadqilknaeiqaikkimglqhrkkyedtkslryghlmimtdqdhdgshikgliinflessfpglldiqgfllefitpiikvsitkptkntiafynmpdyekwreeeshkftwkqkyytslaqevreyfsnldrhlkifhslqgndkdyidlafskkkaddrkewlrqyepgtvldptlkeipisdfinkelilfsladnirsipnvldgfkpgqrkvlygcfkknlkselkvaqlapyvsectayhhgeQSlaqtiiglaqnfvgsnniylllpngafgtratggkdaaaaRiytelnkltrkifhpaddplykyiqedektvepewylpilpmilvngaEgIgtgwStyippfnpleiiknirhlmndeeleqmhpwfrgwtgtieeieplryrmygrieqigdnvleitelpartwtstikeylllglsgndkikpwikdmeeqhddnikfiitlspeemaktrkigfyerfklispislmnmvafdphgkikkynsvneilsefyyvrleyyqkrkdhmserlqwevekysfqvkfikmiiekeltvtnkprnaiiqelenlgfprfnkegkpyygseelygtyeyllgmriwsltkeryqkllkqkqeketelenllklsakdiwntdlkafevgyqeflqrdaear/sasdkyqkisqlehilkrpdtyigsvetqeqlqwiydeetdcmieknvtivpglfkifdeilvnaadnkvrdpsmkridvnihaeehtievkndgkgipieihnkeniyipemifghlltssnydddekkvtggrngygaklcnifstefiletadlnvgqkyvqkwennmsichppkitsykkgpsytkvtfkpdltrfgmkeldndilgvmrrrvydingsvrdinvylngkslkirnfknyvelylksliptilyerinnrwevafavsdisfqqisfvnsiattmggthvnyitdqivkkiseilkkkkkksvksfqiknnmfifinclienpaftsqtkeqlttrvkdfgsrceipleyinkimktdlatrmfeiasritnypkledankagtkegykctlvltegdsalslavaglavvgrdyygcyplrgkmlnvreasadqilknaeiqaikkimglqhrkkyedtkslryghlmimtdqdhdgshikgliinflessfpglldiqgfllefitpiikvsitkptkntiafynmpdyekwreeeshkftwkqkyytslaqevreyfsnldrhlkifhslqgndkdyidlafskkkaddrkewlrqyepgtvldptlkeipisdfinkelilfsladnirsipnvldgfkpgqrkvlygcfkknlkselkvaqlapyvsectayhhgeQslaqtiiglaqnfvgsnniylllpngafgtratggkdaaaaRiytelnkltrkifhpaddplykyiqedektvepewylpilpmilvngaegigtgwstyippfnpleiiknirhlmndeeleqmhpwfrgwtgtieeieplryrmygrieqigdnvleitelpartwtstikeylllglsgndkikpwikdmeeqhddnikfiitlspeemaktrkigfyerfklispislmnmvafdphgkikkynsvneilsefyyvrleyyqkrkdhmserlqwevekysfqvkfikmiiekeltvtnkprnaiiqelenlgfprfnkegkpyygseelygtyeyllgmriwsltkeryqkllkqkqeketelenllklsakdiwntdlkafevgyqeflqrdaear >4gfh_F:Type_II_DNA_topoisomerase;ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase;Ribosomal_protein_S5_domain_2-like; title=TOPOISOMERASE II-DNA-AMPPNP COMPLEX organism=Saccharomyces cerevisiae DNA sequence DC(c1):DG(b15) DG(c2):DC(b14) DC(c3):DG(b13) DG(c4):DC(b12) DG(c5):DC(b11) DT(c6):DA(b10) DA(c7):DT(b9) DG(c8):DC(b8) DC(c9):DG(b7) DA(c10):DT(b6) DG(c11):DC(b5) DT(c12):DA(b4) DA(c13):DT(b3) DG(c14):DC(b2) DG(c15):DC(b1) chainF (696) GLN739 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (738) ARG781 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sasdkyqkisqlehilkrpdtyigsvetqeqlqwiydeetdcmieknvtivpglfkifdeilvnaadnkvrdpsmkridvnihaeehtievkndgkgipieihnkeniyipemifghlltssnydddekkvtggrngygaklcnifstefiletadlnvgqkyvqkwennmsichppkitsykkgpsytkvtfkpdltrfgmkeldndilgvmrrrvydingsvrdinvylngkslkirnfknyvelylksliptilyerinnrwevafavsdisfqqisfvnsiattmggthvnyitdqivkkiseilkkkkkksvksfqiknnmfifinclienpaftsqtkeqlttrvkdfgsrceipleyinkimktdlatrmfeiasritnypkledankagtkegykctlvltegdsalslavaglavvgrdyygcyplrgkmlnvreasadqilknaeiqaikkimglqhrkkyedtkslryghlmimtdqdhdgshikgliinflessfpglldiqgfllefitpiikvsitkptkntiafynmpdyekwreeeshkftwkqkyytslaqevreyfsnldrhlkifhslqgndkdyidlafskkkaddrkewlrqyepgtvldptlkeipisdfinkelilfsladnirsipnvldgfkpgqrkvlygcfkknlkselkvaqlapyvsectayhhgeQslaqtiiglaqnfvgsnniylllpngafgtratggkdaaaaRiytelnkltrkifhpaddplykyiqedektvepewylpilpmilvngaegigtgwstyippfnpleiiknirhlmndeeleqmhpwfrgwtgtieeieplryrmygrieqigdnvleitelpartwtstikeylllglsgndkikpwikdmeeqhddnikfiitlspeemaktrkigfyerfklispislmnmvafdphgkikkynsvneilsefyyvrleyyqkrkdhmserlqwevekysfqvkfikmiiekeltvtnkprnaiiqelenlgfprfnkegkpyygseelygtyeyllgmriwsltkeryqkllkqkqeketelenllklsakdiwntdlkafevgyqeflqrdaear >4gg4_A:Thiolase-like; title=CRYSTAL STRUCTURE OF THE TAL EFFECTOR DHAX3 BOUND TO SPECIFIC DNA-RNA HYBRID organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DT(G-2) DG(G-1) DT(G0) DC(G1) DC(G2) DC(G3) DT(G4) DT(G5) DT(G6) DA(G7) DT(G8) DC(G9) DT(G10) DC(G11) DT(G12) DC(G13) DT(G14) chainA ( 68) ASP301 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ASP335 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 (136) ASP369 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 (272) ILE505 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 (340) ASP573 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 (408) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 5 9 1 0 0 prot.sequence garalealltvagelrgpplqldtgqllkiakrggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnIggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkkl >4gjp_A:Thiolase-like; title=CRYSTAL STRUCTURE OF THE TAL EFFECTOR DHAX3 BOUND TO DSDNA CONTAINING REPETITIVE METHYL-CPG organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DT(I-2):DA(J2) DG(I-1):DC(J1) DT(I0):DA(J0) DC(I1):DG(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DT(I4):DA(J-4) DT(I5):DA(J-5) 5CM(I6):DG(J-6) DG(I7):DC(J-7) 5CM(I8):DG(J-8) DG(I9):DC(J-9) DT(I10):DA(J-10) DC(I11):DG(J-11) DT(I12):DA(J-12) DC(I13):DG(J-13) DT(I14):DA(J-14) chainA ( 37) ARG266 0 0 0 0 2 12 7 0 0 0 0 0 0 0 0 0 0 ( 72) ASP301 0 0 9 9 2 0 0 0 0 0 0 0 0 0 0 0 0 (106) ASP335 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 (140) ASP369 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 (276) ASN505 0 0 0 0 0 0 0 0 10 9 6 0 0 0 0 0 0 (344) ASN573 0 0 0 0 0 0 0 0 0 0 10 9 1 0 0 0 0 (412) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 prot.sequence mqwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkklehhhh >4gjr_B:Thiolase-like; title=CRYSTAL STRUCTURE OF THE TAL EFFECTOR DHAX3 BOUND TO METHYLATED DSDNA organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DT(G1):DA(H15) DG(G2):DC(H14) DT(G3):DA(H13) DC(G4):DG(H12) DC(G5):DG(H11) DC(G6):DG(H10) DT(G7):DA(H9) 5CM(G8):DG(H8) DT(G9):DA(H7) DA(G10):DT(H6) 5CM(G11):DG(H5) DC(G12):DG(H4) DT(G13):DA(H3) DC(G14):DG(H2) 5CM(G15):DG(H1) DC(G16):DG(H0) DT(G17):DA(H-1) chainB ( 36) ARG266 0 0 0 0 2 14 8 0 0 0 0 0 0 0 0 0 0 ( 71) ASP301 0 0 7 9 2 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP335 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 (139) ASP369 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 (275) SER505 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 (343) ASP573 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 (411) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 prot.sequence qwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnSggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdaltndhlvalaclggrpaldavkkl >4gle_A:Xylose_isomerase-like; title=SACUVDE IN COMPLEX WITH 6-4PP-CONTAINING DNA organism=Sulfolobus acidocaldarius DNA sequence DC(B1):DG(C15) DG(B2):DC(C14) DT(B3):DA(C13) DC(B4):DG(C12) DG(B5):DC(C11) DT(B6):DA(C10) DC(B7):DG(C9) DA(B8):5PY(C8) DA(B9):64T(C7) DG(B10):DC(C6) DG(B11):DC(C5) DA(B12):DT(C4) DC(B13):DG(C3) DG(B14):DC(C2) DC(B15):DG(C1) chainA ( 10) VAL6 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 ( 11) SER7 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 ( 21) ASP17 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 25) LYS21 0 0 0 0 6 4 10 0 0 0 0 0 0 0 0 ( 61) ARG57 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 ( 63) SER59 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 64) SER60 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 ( 69) LEU65 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 71) SER67 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 72) HIS68 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 (104) HIS100 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (107) GLN103 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 (108) TYR104 0 0 0 0 0 0 0 0 43 17 0 0 0 0 0 (125) GLU121 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (275) LYS271 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 prot.sequence egrhmrvgyvstnyslgckadktiKlsslseervlkvsssnllclknilewnlkheilffrissntipLaSHpkfhvnwkdklshilgdigdfikensirismhpgQYvvlnsvreevvrssimElkyhadlldsmgiegkiqihvgssmngkeeslnrfienfrklpsniskrlvienddkvfsvkdclwisertgipvifdnlhhsilnngeslndalslvrrtwkdrpmidyseqepgekpgvhattineenfrrfvnevdevdimlevkdkeisalkavkvlkelnkl >4glx_A:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;RuvA_domain_2-like;Nucleic_acid-binding_proteins; title=DNA LIGASE A IN COMPLEX WITH INHIBITOR organism=Escherichia coli DNA sequence DA(C27):DT(B26) DC(C28):DG(B25) DA(C29):DT(B24) DA(C30):DT(B23) DT(C31):DA(B22) DT(C32):DA(B21) DG(C33):DC(B20) DC(C34):DG(B19) DG(C35):DC(B18) DA(C36):DT(B17) DC(C37):DG(B16) DC(C38):DG(B15) DC(C39):DG(B14) DC(D40):DG(B13) DA(D41):DT(B12) DC(D42):DG(B11) DT(D43):DA(B10) DA(D44):DT(B9) DT(D45):DA(B8) DC(D46):DG(B7) DG(D47):DC(B6) DG(D48):DC(B5) DA(D49):DT(B4) DA(D50):DT(B3) DT(D51):DA(B2) DG(D52):DC(B1) chainA (123) ARG136 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) ASN201 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) ARG208 0 0 0 0 0 0 0 0 0 6 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (346) HIS359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (370) VAL383 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) ILE384 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 (474) ARG487 0 0 0 0 6 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sieqqltelrttlrhheylyhvmdapeipdaeydrlmrelreletkhpelitpdsptqrplaafsqirhevpmlsldnvfdeesflafnkrvqdrtwccelkldglavsilyengvlvsaatRgdgttgeditsnvrtiraiplklhgeniparlevrgevflpqagfekinedarrtggkvfanpRNaaagslRqldpritakrpltffcygvgvleggelpdthlgrllqfkkwglpvsdrvtlcesaeevlafyhkveedrptlgfdidgvvikvnslaqqeqlgfvaraprwavafkfpaqeqmtfvrdvefqvgrtgaitpvarlepvhvagvlvsnaTlHnadeierlglrigdkvvirRagdVIpqvvnvvlserpedtrevvfpthcpvcgsdvervegeavarctgglicgaqrkeslkhfvsrramdvdgmgdkiidqlvekeyvhtpadlfkltagkltgleRmgpksaqnvvnalekakettfarflyalgirevgeataaglaayfgtlealeaasieelqkvpdvgivvashvhnffaeesnrnvisellaegvhwpap >4gnx_AZ:Nucleic_acid-binding_proteins; title=STRUCTURE OF U. MAYDIS REPLICATION PROTEIN A BOUND TO SSDNA organism=USTILAGO MAYDIS DNA sequence DT(L1) DT(L2) DT(L3) DT(L4) DT(L5) DT(L6) DT(L7) DT(L8) DT(L9) DT(L12) DT(L13) DT(L14) DT(L15) DT(L16) DT(L17) DT(L18) DT(L19) DT(L20) DT(L21) DT(L22) chainA chainZ ( 27) ARG208 0 0 3 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) TRP210 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LEU219 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) PHE236 0 37 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN237 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG259 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS264 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) PHE267 0 0 12 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) VAL339 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) LYS341 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) THR357 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) TRP359 0 0 0 0 0 40 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) LYS384 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) PHE388 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (213) SER394 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) PHE396 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) SER397 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ALA446 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 (258) MET448 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (260) GLU450 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (279) ASP469 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 (280) TYR470 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 (288) VAL478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (289) TYR479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 (291) LYS481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 (294) ASN484 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (297) TYR487 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (306) ASN496 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (332) ARG522 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 (334) ILE524 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (336) SER526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (338) ASN528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (347) TRP537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53 1 0 0 0 (351) PHE541 0 0 0 0 0 0 0 0 0 0 38 1 0 0 0 0 0 0 0 0 (353) GLU543 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (398) ASP588 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 (400) PHE590 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 (405) ARG595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 4 0 0 0 0 (407) ARG597 0 0 0 0 0 0 0 0 0 0 0 3 1 2 7 0 0 0 0 0 prot.sequence mekptplinssmlgqyvgqtvrivgkvhkvtgntllmqtsdlgnveiamtpdsdvssstfvevtgkvsdagssfqanqirefttvdvdltlvenvvqisaafpnlfsd/iypieglspyqnrwtikarvtsksdiRhWsnqrgegkLfsvnllddsgeikatgFNdavdrfypllqenhvyliskaRvniaKkqFsnlqneyeitfensteieectdatdvpevkyefvrinelesveanqqcdvigildsygelseivskasqrpVqKreltlvdqgnrsvklTlWgktaetfptnagvdekpvlafkgvKvgdFggrslSmFSsstmlinpditeshvlrgwydndgahaqfqpytngggagAnMaErrtivqvkdenlgmsekpDYfnvratvVYiKqeNlyYtacasegcNkkvnldhennwrcekcdrsyatpeyRyIlStNvadatgqmWlsgFnEdatqligmsagelhklreesesefsaalhraanrmymfncrakmDtFndtaRvRytisraapvdfakagmelvdairaym >4gnx_CX:Nucleic_acid-binding_proteins; title=STRUCTURE OF U. MAYDIS REPLICATION PROTEIN A BOUND TO SSDNA organism=USTILAGO MAYDIS DNA sequence DT(K24) DT(K23) DT(K22) DT(K21) DT(K20) DT(K19) DT(K18) DT(K17) DT(K1) DT(K2) DT(K3) DT(K4) DT(K5) DT(K6) DT(K7) DT(K8) DT(K9) DT(K10) DT(K11) DT(K12) DT(K13) DT(K14) DT(K15):DT(K17) DT(K16) chainC ( 27) ARG208 0 0 0 0 0 0 0 0 0 0 5 29 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) TRP210 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG214 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LEU219 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) LYS232 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) PHE236 0 0 0 0 0 0 0 0 0 38 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN237 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS264 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) PHE267 0 0 0 0 0 0 0 0 0 0 25 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 96) THR277 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) VAL339 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (160) LYS341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (176) THR357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (178) TRP359 0 0 0 0 0 0 0 0 0 0 0 0 0 44 15 0 0 0 0 0 0 0 0 0 (203) LYS384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (207) PHE388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (213) SER394 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 (215) PHE396 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 (216) SER397 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 (256) ALA446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 (258) MET448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 (260) GLU450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (277) LYS467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (279) ASP469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (280) TYR470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 1 0 0 0 0 0 0 (288) VAL478 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) TYR479 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) LYS481 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (294) ASN484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (297) TYR487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (306) ASN496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (332) ARG522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (334) ILE524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 (336) SER526 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ASN528 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) TRP537 0 0 0 0 0 4 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (351) PHE541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 2 0 0 (394) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 (396) LYS586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (400) PHE590 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 (405) ARG595 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 (407) ARG597 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 2 chainX prot.sequence iypieglspyqnrwtikarvtsksdiRhWsnqRgegkLfsvnllddsgeiKatgFNdavdrfypllqenhvyliskarvniaKkqFsnlqneyeiTfensteieectdatdvpevkyefvrinelesveanqqcdvigildsygelseivskasqrpVqKreltlvdqgnrsvklTlWgktaetfptnagvdekpvlafkgvKvgdFggrslSmFSsstmlinpditeshvlrgwydndgahaqfqpytngggagAnMaErrtivqvkdenlgmseKpDYfnvratvVYiKqeNlyYtacasegcNkkvnldhennwrcekcdrsyatpeyRyIlStNvadatgqmWlsgFnedatqligmsagelhklreesesefsaalhraanrmymfncRaKmdtFndtaRvRytisraapvdfakagmelvdairaym/mekptplinssmlgqyvgqtvrivgkVhKvtgNtllmQtsdlgnveiamtPdsdVSsstfvevtgkvsdagssfqanqirefTtvDvdltlvenvVqisaafpnlfsd >4gnx_Z:Nucleic_acid-binding_proteins; title=STRUCTURE OF U. MAYDIS REPLICATION PROTEIN A BOUND TO SSDNA organism=USTILAGO MAYDIS DNA sequence DT(L1) DT(L2) DT(L3) DT(L4) DT(L5) DT(L6) DT(L7) DT(L8) DT(L9) DT(L12) DT(L13) DT(L14) DT(L15) DT(L16) DT(L17) DT(L18) DT(L19) DT(L20) DT(L21) DT(L22) chainZ ( 27) ARG208 0 0 3 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) TRP210 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LEU219 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) PHE236 0 37 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN237 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG259 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS264 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) PHE267 0 0 12 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) VAL339 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) LYS341 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) THR357 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) TRP359 0 0 0 0 0 40 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) LYS384 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) PHE388 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (213) SER394 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) PHE396 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) SER397 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ALA446 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 (258) MET448 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (260) GLU450 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (279) ASP469 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 (280) TYR470 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 (288) VAL478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (289) TYR479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 (291) LYS481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 (294) ASN484 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (297) TYR487 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (306) ASN496 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (332) ARG522 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 (334) ILE524 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (336) SER526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (338) ASN528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (347) TRP537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53 1 0 0 0 (351) PHE541 0 0 0 0 0 0 0 0 0 0 38 1 0 0 0 0 0 0 0 0 (353) GLU543 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (398) ASP588 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 (400) PHE590 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 (405) ARG595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 4 0 0 0 0 (407) ARG597 0 0 0 0 0 0 0 0 0 0 0 3 1 2 7 0 0 0 0 0 prot.sequence iypieglspyqnrwtikarvtsksdiRhWsnqrgegkLfsvnllddsgeikatgFNdavdrfypllqenhvyliskaRvniaKkqFsnlqneyeitfensteieectdatdvpevkyefvrinelesveanqqcdvigildsygelseivskasqrpVqKreltlvdqgnrsvklTlWgktaetfptnagvdekpvlafkgvKvgdFggrslSmFSsstmlinpditeshvlrgwydndgahaqfqpytngggagAnMaErrtivqvkdenlgmsekpDYfnvratvVYiKqeNlyYtacasegcNkkvnldhennwrcekcdrsyatpeyRyIlStNvadatgqmWlsgFnEdatqligmsagelhklreesesefsaalhraanrmymfncrakmDtFndtaRvRytisraapvdfakagmelvdairaym >4gop_AYZ:Nucleic_acid-binding_proteins; title=STRUCTURE AND CONFORMATIONAL CHANGE OF A REPLICATION PROTEIN A HETEROTRIMER BOUND TO SSDNA organism=USTILAGO MAYDIS DNA sequence DT(L1) DT(L2) DT(L3) DT(L4) DT(L5) DT(L6) DT(L7) DT(L8) DT(L9) DT(L12) DT(L13) DT(L14) DT(L15) DT(L16) DT(L17) DT(L18) DT(L19) DT(L20) DT(L21) DT(L22) chainA chainY ( 1) ASN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 32) GLN77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 6 0 ( 65) TRP110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 ( 82) THR135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 ( 84) LYS137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 ( 86) PHE139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 93) SER146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 96) HIS149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 chainZ ( 27) ARG208 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) TRP210 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LEU219 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) PHE236 0 37 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN237 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG259 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS264 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) PHE267 0 0 16 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) VAL339 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) LYS341 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) THR357 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) TRP359 0 0 0 0 0 35 13 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) LYS384 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) PHE388 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (213) SER394 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) PHE396 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) SER397 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ALA446 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 (258) MET448 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (260) GLU450 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (280) TYR470 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 (288) VAL478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (289) TYR479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 (291) LYS481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 (294) ASN484 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (297) TYR487 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (306) ASN496 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (332) ARG522 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 (334) ILE524 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (336) SER526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (338) ASN528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (347) TRP537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 1 0 0 0 (351) PHE541 0 0 0 0 0 0 0 0 0 0 45 1 0 0 0 0 0 0 0 0 (353) GLU543 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (398) ASP588 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (400) PHE590 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0 0 0 0 (405) ARG595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 9 0 0 0 0 (407) ARG597 0 0 0 0 0 0 0 0 0 0 0 5 2 3 6 0 0 0 0 0 prot.sequence mekptplinssmlgqyvgqtvrivgkvhkvtgntllmqtsdlgnveiamtpdsdvssstfvevtgkvsdagssfqanqirefttvdvdltlvenvvqisaafpnlfsd/NtlrpvtirqilnaeqphpdaefildgaelgQltfvavvrnisrnatnvaysvedgtgqievrqWldaseirnnvyvrvlgTlKsFqnrrsiSsgHmrpvidynevmfhrleavhahlqvtr/iypieglspyqnrwtikarvtsksdiRhWsnqrgegkLfsvnllddsgeikatgFNdavdrfypllqenhvyliskaRvniaKkqFsnlqneyeitfensteieectdatdvpevkyefvrinelesveanqqcdvigildsygelseivskasqrpVqKreltlvdqgnrsvklTlWgktaetfptnagvdekpvlafkgvKvgdFggrslSmFSsstmlinpditeshvlrgwydndgahaqfqpytngggagAnMaErrtivqvkdenlgmsekpdYfnvratvVYiKqeNlyYtacasegcNkkvnldhennwrcekcdrsyatpeyRyIlStNvadatgqmWlsgFnEdatqligmsagelhklreesesefsaalhraanrmymfncrakmDtFndtaRvRytisraapvdfakagmelvdairaym >4guo_BD:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN COMPLEX WITH 12 BP DNA organism=Homo sapiens DNA sequence DC(H512):DG(G511) DG(H513):DC(G510) DG(H514):DC(G509) DG(H515):DC(G508) DC(H516):DG(G507) DT(H517):DA(G506) DT(H518):DA(G505) DG(H519):DC(G504) DC(H520):DG(G503) DC(H521):DG(G502) DC(H522):DG(G501) DC(F410):DG(E409) DG(F411):DC(E408) DG(F412):DC(E407) DG(F413):DC(E406) DC(F414):DG(E405) DT(F415):DA(E404) DT(F416):DA(E403) DG(F417):DC(E402) DC(F418):DG(E401) DC(F419):DG(E400) DC(F420):DG(E399) DG(F421):DC(E398) chainB ( 25) LYS138 0 0 0 0 0 0 0 0 0 0 0 0 3 14 7 0 0 0 0 0 0 0 0 (155) ARG268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (183) ALA296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (184) CYS297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (187) ARG300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 6 0 0 0 0 0 0 chainD ( 25) LYS138 0 0 0 0 0 0 0 0 6 12 1 0 0 0 0 0 0 0 0 0 0 0 0 (183) ALA296 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS297 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG300 0 0 0 0 0 0 12 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnRrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyre/fipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyre >4guo_I:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN COMPLEX WITH 12 BP DNA organism=Homo sapiens DNA sequence DC(N612):DG(M611) DG(N613):DC(M610) DG(N614):DC(M609) DG(N615):DC(M608) DC(N616):DG(M607) DT(N617):DA(M606) DT(N618):DA(M605) DG(N619):DC(M604) DC(N620):DG(M603) DC(N621):DG(M602) DC(N622):DG(M601) DG(N623):DC(M600) chainI ( 24) LYS138 0 0 0 0 0 0 0 0 6 9 2 0 ( 25) SER139 0 0 0 0 0 0 0 0 0 0 2 2 (182) ALA296 0 0 0 0 0 0 0 1 1 0 0 0 (183) CYS297 0 0 0 0 0 0 0 0 3 0 0 0 (186) ARG300 0 0 0 0 0 0 13 12 4 0 0 0 prot.sequence ipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >4guo_IJ:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN COMPLEX WITH 12 BP DNA organism=Homo sapiens DNA sequence DC(N612):DG(M611) DG(N613):DC(M610) DG(N614):DC(M609) DG(N615):DC(M608) DC(N616):DG(M607) DT(N617):DA(M606) DT(N618):DA(M605) DG(N619):DC(M604) DC(N620):DG(M603) DC(N621):DG(M602) DC(N622):DG(M601) DG(N623):DC(M600) chainI ( 24) LYS138 0 0 0 0 0 0 0 0 6 9 2 0 ( 25) SER139 0 0 0 0 0 0 0 0 0 0 2 2 (182) ALA296 0 0 0 0 0 0 0 1 1 0 0 0 (183) CYS297 0 0 0 0 0 0 0 0 3 0 0 0 (186) ARG300 0 0 0 0 0 0 13 12 4 0 0 0 chainJ ( 25) LYS138 0 5 8 2 0 0 0 0 0 0 0 0 ( 26) SER139 0 1 0 0 0 0 0 0 0 0 0 0 (155) ARG268 0 0 0 0 0 0 0 2 0 0 0 0 (183) ALA296 0 0 0 1 1 0 0 0 0 0 0 0 (184) CYS297 0 0 0 3 0 0 0 0 0 0 0 0 (187) ARG300 0 0 0 4 9 8 0 0 0 0 0 0 prot.sequence ipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq/fipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnRrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >4guo_KL:p53-like_transcription_factors; title=STRUCTURE OF P73 DNA BINDING DOMAIN COMPLEX WITH 12 BP DNA organism=Homo sapiens DNA sequence DC(O700):DG(P723) DG(O701):DC(P722) DG(O702):DC(P721) DG(O703):DC(P720) DC(O704):DG(P719) DA(O705):DT(P718) DA(O706):DT(P717) DG(O707):DC(P716) DC(O708):DG(P715) DC(O709):DG(P714) DC(O710):DG(P713) DG(O711):DC(P712) chainK ( 28) LYS138 0 0 0 0 0 0 0 0 0 5 5 0 (186) ALA296 0 0 0 0 0 0 0 1 1 0 0 0 (187) CYS297 0 0 0 0 0 0 0 0 3 0 0 0 (190) ARG300 0 0 0 0 0 0 18 15 8 0 0 0 chainL ( 28) LYS138 0 6 13 6 0 0 0 0 0 0 0 0 (186) ALA296 0 0 0 1 1 0 0 0 0 0 0 0 (187) CYS297 0 0 0 3 1 0 0 0 0 0 0 0 (190) ARG300 0 0 0 2 11 14 0 0 0 0 0 0 prot.sequence hhefipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyre/hhefipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyre >4guq_A:p53-like_transcription_factors; title=STRUCTURE OF MUTS139F P73 DNA BINDING DOMAIN COMPLEXED WITH 20BP DNA RESPONSE ELEMENT organism=Homo sapiens DNA sequence DG(E400):DC(F419) DA(E401):DT(F418) DA(E402):DT(F417) DC(E403):DG(F416) DA(E404):DT(F415) DT(E405):DA(F414) DG(E406):DC(F413) DT(E407):DA(F412) DT(E408):DA(F411) DC(E409):DG(F410) chainA (184) ALA296 0 0 1 1 0 0 0 0 0 0 (185) CYS297 0 0 2 0 0 0 0 0 0 0 (188) ARG300 0 0 2 10 11 0 0 0 0 0 prot.sequence efipsntdypgphhfevtfqqsstakfatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >4guq_AB:p53-like_transcription_factors; title=STRUCTURE OF MUTS139F P73 DNA BINDING DOMAIN COMPLEXED WITH 20BP DNA RESPONSE ELEMENT organism=Homo sapiens DNA sequence DG(F410):DC(E409) DA(F411):DT(E408) DA(F412):DT(E407) DC(F413):DG(E406) DA(F414):DT(E405) DT(F415):DA(E404) DG(F416):DC(E403) DT(F417):DA(E402) DT(F418):DA(E401) DC(F419):DG(E400) chainA (184) ALA296 0 0 0 0 0 0 1 1 0 0 (185) CYS297 0 0 0 0 0 0 0 2 0 0 (188) ARG300 0 0 0 0 0 11 10 2 0 0 chainB (183) ALA296 0 0 1 1 0 0 0 0 0 0 (184) CYS297 0 0 2 0 0 0 0 0 0 0 (187) ARG300 0 0 2 8 6 0 0 0 0 0 prot.sequence efipsntdypgphhfevtfqqsstakfatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq/efipsntdypgphhfevtfqqsstakfatwtyspllkklycqiaktcpiqikvtppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyre >4gxi_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=R283K DNA POLYMERASE BETA BINARY COMPLEX WITH A TEMPLATING 8OG organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 39 ( 29) LYS35 0 0 0 0 8 ( 32) ALA38 0 0 0 0 5 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmkahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4gxj_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=R283K DNA POLYMERASE BETA TERNARY COMPLEX WITH A TEMPLATING 8OG AND INCOMING DCTP ANALOG organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DA(P10):DT(T7) chainA (221) LYS234 0 0 0 0 0 0 0 6 2 0 (256) TYR271 0 0 0 0 0 0 0 0 0 6 (280) GLU295 0 0 0 0 0 0 0 0 0 1 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndeyphrridirlipkdqyycgvlYftgsdifnknmKahalekgftinEytirplageplpvdsekdifdyiqwkyrepkdrse >4gxk_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=R283K DNA POLYMERASE BETA TERNARY COMPLEX WITH A TEMPLATING 8OG AND INCOMING DATP ANALOG organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 8 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskdekeyphrridirlipkdqyycgvlyftgsdifnknmkahalekgftineytirpgeplpvdsekdifdyiqwkyrepkdrse >4gz0_AG:DNase_I-like; title=MUS MUSCULUS TDP2-DNA SUBSTRATE ANALOG (5'-6-AMINOHEXANOL) COMPLEX organism=Mus musculus DNA sequence DC(D3):DG(H10) DG(D4):DC(H9) DA(D5):DT(H8) DA(D6):DT(H7) DT(D7):DA(H6) DT(D8):DA(H5) DC(D9):DG(H4) DG(D10):DC(H3) chainA (196) ARG316 5 0 0 0 0 0 0 0 (197) ILE317 21 0 0 0 0 0 0 0 (198) PRO318 5 0 0 0 0 0 0 0 (201) TYR321 1 0 0 0 0 0 0 0 chainG (195) ARG316 0 0 0 0 0 0 0 12 (196) ILE317 0 0 0 0 0 0 0 20 (197) PRO318 0 0 0 0 0 0 0 3 prot.sequence sstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl/stisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >4gz0_BI:DNase_I-like; title=MUS MUSCULUS TDP2-DNA SUBSTRATE ANALOG (5'-6-AMINOHEXANOL) COMPLEX organism=Mus musculus DNA sequence DC(C3):DG(J10) DG(C4):DC(J9) DA(C5):DT(J8) DA(C6):DT(J7) DT(C7):DA(J6) DT(C8):DA(J5) DC(C9):DG(J4) DG(C10):DC(J3) chainB (196) ARG316 2 0 0 0 0 0 0 0 (197) ILE317 23 0 0 0 0 0 0 0 (198) PRO318 5 0 0 0 0 0 0 0 (201) TYR321 1 0 0 0 0 0 0 0 chainI (196) ARG316 0 0 0 0 0 0 0 3 (197) ILE317 0 0 0 0 0 0 0 21 (198) PRO318 0 0 0 0 0 0 0 5 prot.sequence sstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl/sstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >4gz0_EK:DNase_I-like; title=MUS MUSCULUS TDP2-DNA SUBSTRATE ANALOG (5'-6-AMINOHEXANOL) COMPLEX organism=Mus musculus DNA sequence DC(L3):DG(F10) DG(L4):DC(F9) DA(L5):DT(F8) DA(L6):DT(F7) DT(L7):DA(F6) DT(L8):DA(F5) DC(L9):DG(F4) DG(L10):DC(F3) chainE (196) ARG316 0 0 0 0 0 0 0 2 (197) ILE317 0 0 0 0 0 0 0 21 (198) PRO318 0 0 0 0 0 0 0 4 (201) TYR321 0 0 0 0 0 0 0 1 chainK (195) ARG316 4 0 0 0 0 0 0 0 (196) ILE317 20 0 0 0 0 0 0 0 (197) PRO318 3 0 0 0 0 0 0 0 (200) TYR321 1 0 0 0 0 0 0 0 prot.sequence sstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl/stisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >4gz0_G:DNase_I-like; title=MUS MUSCULUS TDP2-DNA SUBSTRATE ANALOG (5'-6-AMINOHEXANOL) COMPLEX organism=Mus musculus DNA sequence DC(H3):DG(D10) DG(H4):DC(D9) DA(H5):DT(D8) DA(H6):DT(D7) DT(H7):DA(D6) DT(H8):DA(D5) DC(H9):DG(D4) DG(H10):DC(D3) chainG (195) ARG316 12 0 0 0 0 0 0 0 (196) ILE317 20 0 0 0 0 0 0 0 (197) PRO318 3 0 0 0 0 0 0 0 prot.sequence stisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >4gz1_A:DNase_I-like; title=MUS MUSCULUS TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-MG2+ COMPLEX AT 1.5 ANGSTROMS RESOLUTION organism=Mus musculus DNA sequence DC(C2):DG(D9) DG(C3):DC(D8) DA(C4):DT(D7) DA(C5):DT(D6) DT(C6):DA(D5) DT(C7):DA(D4) DC(C8):DG(D3) DG(C9):DC(D2) chainA (202) ILE317 0 0 0 0 0 0 0 16 (203) PRO318 0 0 0 0 0 0 0 19 (204) ALA319 0 0 0 0 0 0 0 1 (206) TYR321 0 0 0 0 0 0 0 4 prot.sequence ngledsstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlrIPAaYkhrfdriffraeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >4gz1_AB:DNase_I-like; title=MUS MUSCULUS TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-MG2+ COMPLEX AT 1.5 ANGSTROMS RESOLUTION organism=Mus musculus DNA sequence DC(D2):DG(C9) DG(D3):DC(C8) DA(D4):DT(C7) DA(D5):DT(C6) DT(D6):DA(C5) DT(D7):DA(C4) DC(D8):DG(C3) DG(D9):DC(C2) chainA (202) ILE317 16 0 0 0 0 0 0 0 (203) PRO318 19 0 0 0 0 0 0 0 (204) ALA319 1 0 0 0 0 0 0 0 (206) TYR321 4 0 0 0 0 0 0 0 chainB (185) TRP307 0 0 0 0 0 0 0 1 (195) ILE317 0 0 0 0 0 0 0 20 (196) PRO318 0 0 0 0 0 0 0 17 (197) ALA319 0 0 0 0 0 0 0 1 (199) TYR321 0 0 0 0 0 0 0 4 prot.sequence ngledsstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlrIPAaYkhrfdriffraeghlipqsldlvglekldcgrfpsdhwgllctlnvvl/tisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytWdtkannnlrIPAaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >4gz2_AB:DNase_I-like; title=MUS MUSCULUS TDP2 EXCLUDED SSDNA COMPLEX organism=Mus musculus DNA sequence DC(C5):DG(D12) DG(C6):DC(D11) DA(C7):DT(D10) DA(C8):DT(D9) DT(C9):DA(D8) DT(C10):DA(D7) DC(C11):DG(D6) DG(C12):DC(D5) chainA (196) ILE317 0 0 0 0 0 0 0 17 (197) PRO318 0 0 0 0 0 0 0 15 (198) ALA319 0 0 0 0 0 0 0 1 (200) TYR321 0 0 0 0 0 0 0 4 chainB (196) ILE317 17 0 0 0 0 0 0 0 (197) PRO318 16 0 0 0 0 0 0 0 (198) ALA319 1 0 0 0 0 0 0 0 (200) TYR321 5 0 0 0 0 0 0 0 prot.sequence stisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlrIPAaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvv/stisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlrIPAaYkhrfdriffraghlipqsldlvglekldcgrfpsdhwgllctlnvv >4gz2_B:DNase_I-like; title=MUS MUSCULUS TDP2 EXCLUDED SSDNA COMPLEX organism=Mus musculus DNA sequence DC(C5):DG(D12) DG(C6):DC(D11) DA(C7):DT(D10) DA(C8):DT(D9) DT(C9):DA(D8) DT(C10):DA(D7) DC(C11):DG(D6) DG(C12):DC(D5) chainB (196) ILE317 17 0 0 0 0 0 0 0 (197) PRO318 16 0 0 0 0 0 0 0 (198) ALA319 1 0 0 0 0 0 0 0 (200) TYR321 5 0 0 0 0 0 0 0 prot.sequence stisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlrIPAaYkhrfdriffraghlipqsldlvglekldcgrfpsdhwgllctlnvv >4gzn_C:beta-beta-alpha_zinc_fingers; title=MOUSE ZFP57 ZINC FINGERS IN COMPLEX WITH METHYLATED DNA organism=Mus musculus DNA sequence DC(B2):DG(A11) DT(B3):DA(A10) DG(B4):DC(A9) 5CM(B5):DG(A8) DG(B6):5CM(A7) DG(B7):DC(A6) DC(B8):DG(A5) DA(B9):DT(A4) DA(B10):DT(A3) DT(B11):DA(A2) chainC ( 16) ASP151 0 0 0 0 0 1 4 0 0 0 ( 17) ALA152 0 0 0 0 0 0 0 0 1 0 ( 18) SER153 0 0 0 0 0 2 4 6 0 0 ( 22) ARG157 0 0 0 0 3 9 11 17 0 0 ( 43) ARG178 0 0 0 7 13 1 0 0 0 0 ( 46) SER181 0 0 0 0 0 2 2 0 0 0 ( 47) GLU182 0 0 1 9 1 0 0 0 0 0 ( 50) ARG185 0 23 12 5 0 0 0 0 0 0 prot.sequence serpffcnfcgktyrDASglsRhrrahlgyrprscpecgkcfRdqSEvnRhlkvhqnkp >4gzy_CD: title=CRYSTAL STRUCTURES OF BACTERIAL RNA POLYMERASE PAUSED ELONGATION COMPLEXES organism=THERMUS THERMOPHILUS DNA sequence DA(N3):DT(T11) DA(N4):DT(T10) DG(N5):DC(T9) DA(N6):DT(T8) DG(N7):DC(T7) DA(N8):DT(T6) DT(N9):DA(T5) DT(N10):DA(T4) DC(N11):DG(T3) DC(N12):DG(T2) DC(N13):DG(T1) chainC (416) ARG422 1 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdif/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdLndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqlqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieear >4gzz_CD: title=CRYSTAL STRUCTURES OF BACTERIAL RNA POLYMERASE PAUSED ELONGATION COMPLEXES organism=THERMUS THERMOPHILUS DNA sequence DG(T1):DC(N13) DG(T2):DC(N12) DG(T3):DC(N11) DA(T4):DT(N10) DA(T5):DT(N9) DT(T6):DA(N8) DC(T7):DG(N7) DT(T8):DA(N6) DC(T9):DG(N5) DT(T10):DA(N4) DT(T11):DA(N3) chainC (416) ARG422 0 0 0 0 0 0 0 0 0 0 1 chainD prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdif/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdLndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqlqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieear >4h0e_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MUTANT ORR3 IN COMPLEX WITH NTD OF ARAR organism=Bacillus Subtilis DNA sequence DA(U2):DT(T21) DA(U3):DT(T20) DT(U4):DA(T19) DT(U5):DA(T18) DT(U6):DA(T17) DG(U7):DC(T16) DT(U8):DA(T15) DC(U9):DG(T14) DC(U10):DG(T13) DG(U11):DC(T12) DT(U12):DA(T11) DA(U13):DT(T10) DC(U14):DG(T9) DA(U15):DT(T8) DT(U16):DA(T7) DT(U17):DA(T6) DT(U18):DA(T5) DT(U19):DA(T4) DA(U20):DT(T3) DT(U21):DA(T2) chainA ( 32) GLU30 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASN31 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER40 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 43) ARG41 0 0 0 0 16 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) HIS42 0 0 0 0 0 0 0 0 0 19 5 0 0 0 0 0 0 0 0 0 ( 47) ARG45 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) GLN61 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efmlpkyaqvkeeisswinqgkilpdqkiptENelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva >4h0e_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MUTANT ORR3 IN COMPLEX WITH NTD OF ARAR organism=Bacillus Subtilis DNA sequence DA(U2):DT(T21) DA(U3):DT(T20) DT(U4):DA(T19) DT(U5):DA(T18) DT(U6):DA(T17) DG(U7):DC(T16) DT(U8):DA(T15) DC(U9):DG(T14) DC(U10):DG(T13) DG(U11):DC(T12) DT(U12):DA(T11) DA(U13):DT(T10) DC(U14):DG(T9) DA(U15):DT(T8) DT(U16):DA(T7) DT(U17):DA(T6) DT(U18):DA(T5) DT(U19):DA(T4) DA(U20):DT(T3) DT(U21):DA(T2) chainA ( 32) GLU30 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASN31 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER40 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 43) ARG41 0 0 0 0 16 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) HIS42 0 0 0 0 0 0 0 0 0 19 5 0 0 0 0 0 0 0 0 0 ( 47) ARG45 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) GLN61 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 43) GLU30 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 53) SER40 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG41 0 0 0 0 0 0 0 0 0 0 0 2 12 12 0 0 0 0 0 0 ( 55) HIS42 0 0 0 0 0 0 0 8 18 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG45 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 ( 74) GLN61 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 prot.sequence efmlpkyaqvkeeisswinqgkilpdqkiptENelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva/levlfqgplgsefmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva >4h10_A:HLH,_helix-loop-helix_DNA-binding_domain; title=INTERMOLECULAR RECOGNITION REVEALED BY THE COMPLEX STRUCTURE OF HUMAN CLOCK-BMAL1 BASIC HELIX-LOOP-HELIX DOMAINS WITH E-BOX DNA organism=HOMO SAPIENS DNA sequence DG(D304):DC(C117) DG(D305):DC(C116) DG(D306):DC(C115) DT(D307):DA(C114) DC(D308):DG(C113) DA(D309):DT(C112) DC(D310):DG(C111) DG(D311):DC(C110) DT(D312):DA(C109) DG(D313):DC(C108) DT(D314):DA(C107) DT(D315):DA(C106) DC(D316):DG(C105) DC(D317):DG(C104) chainA ( 9) HIS77 0 0 1 7 10 7 0 0 0 0 0 0 0 0 ( 10) SER78 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 12) ILE80 0 0 1 1 0 0 0 0 0 0 0 0 0 0 ( 13) GLU81 0 0 0 2 9 10 2 0 0 0 0 0 0 0 ( 16) ARG84 0 0 0 0 6 1 0 0 0 0 0 0 0 0 ( 17) ARG85 0 0 0 0 0 0 5 10 0 0 0 0 0 0 prot.sequence riknareaHSqIEkrRRdkmnsfidelaslvptcnamsrkldkltvlrmavqhmktlrga >4h10_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=INTERMOLECULAR RECOGNITION REVEALED BY THE COMPLEX STRUCTURE OF HUMAN CLOCK-BMAL1 BASIC HELIX-LOOP-HELIX DOMAINS WITH E-BOX DNA organism=HOMO SAPIENS DNA sequence DG(C104):DC(D317) DG(C105):DC(D316) DA(C106):DT(D315) DA(C107):DT(D314) DC(C108):DG(D313) DA(C109):DT(D312) DC(C110):DG(D311) DG(C111):DC(D310) DT(C112):DA(D309) DG(C113):DC(D308) DA(C114):DT(D307) DC(C115):DG(D306) DC(C116):DG(D305) DC(C117):DG(D304) chainA ( 9) HIS77 0 0 0 0 0 0 0 0 7 10 7 1 0 0 ( 10) SER78 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 12) ILE80 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 13) GLU81 0 0 0 0 0 0 0 2 10 9 2 0 0 0 ( 16) ARG84 0 0 0 0 0 0 0 0 1 6 0 0 0 0 ( 17) ARG85 0 0 0 0 0 0 10 5 0 0 0 0 0 0 chainB ( 9) ARG39 0 0 0 2 11 15 0 0 0 0 0 0 0 0 ( 10) ASN40 0 0 0 0 0 4 1 0 0 0 0 0 0 0 ( 13) GLU43 0 0 0 0 9 10 1 0 0 0 0 0 0 0 ( 16) ARG46 0 0 0 3 4 0 0 0 0 0 0 0 0 0 ( 17) ARG47 0 0 0 0 0 0 3 9 0 0 0 0 0 0 prot.sequence riknareaHSqIEkrRRdkmnsfidelaslvptcnamsrkldkltvlrmavqhmktlrga/kdkakrvsRNksEkkRRdqfnvlikelgsmlpgnarkmdkstvlqksidflrkhkeitawleh >4h10_B:HLH,_helix-loop-helix_DNA-binding_domain; title=INTERMOLECULAR RECOGNITION REVEALED BY THE COMPLEX STRUCTURE OF HUMAN CLOCK-BMAL1 BASIC HELIX-LOOP-HELIX DOMAINS WITH E-BOX DNA organism=HOMO SAPIENS DNA sequence DG(D304):DC(C117) DG(D305):DC(C116) DG(D306):DC(C115) DT(D307):DA(C114) DC(D308):DG(C113) DA(D309):DT(C112) DC(D310):DG(C111) DG(D311):DC(C110) DT(D312):DA(C109) DG(D313):DC(C108) DT(D314):DA(C107) DT(D315):DA(C106) DC(D316):DG(C105) DC(D317):DG(C104) chainB ( 9) ARG39 0 0 0 0 0 0 0 0 15 11 2 0 0 0 ( 10) ASN40 0 0 0 0 0 0 0 1 4 0 0 0 0 0 ( 13) GLU43 0 0 0 0 0 0 0 1 10 9 0 0 0 0 ( 16) ARG46 0 0 0 0 0 0 0 0 0 4 3 0 0 0 ( 17) ARG47 0 0 0 0 0 0 9 3 0 0 0 0 0 0 prot.sequence kdkakrvsRNksEkkRRdqfnvlikelgsmlpgnarkmdkstvlqksidflrkhkeitawleh >4h5q_ABC:UBA-like; title=CRYSTAL STRUCTURE OF RIFT VALLEY FEVER VIRUS NUCLEOCAPSID PROTEIN HEXAMER BOUND TO SINGLE-STRANDED DNA organism=Rift valley fever virus DNA sequence DT(D13) DT(D12) DT(D11) DT(D1) DT(D2) DT(D3) DT(D4) DT(D5) DT(D6) DT(D7) DT(D8) DT(D9) DT(D10):DT(D11) chainA ( 27) TYR30 0 0 0 0 0 0 0 30 0 0 0 0 0 ( 63) ASN66 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 93) ASN96 0 0 0 0 0 0 0 0 0 1 2 0 0 (102) SER105 0 0 0 0 0 0 0 0 0 0 10 0 0 (124) PRO127 0 0 0 0 0 0 0 0 0 0 0 10 0 (144) PRO147 0 0 0 0 0 0 0 0 2 0 0 0 0 (170) LEU173 0 0 0 0 0 0 0 0 1 0 0 0 0 (173) PHE176 0 0 0 0 0 0 0 0 0 0 0 6 0 (174) SER177 0 0 0 0 0 0 0 0 8 0 0 0 0 (177) ILE180 0 0 0 0 0 0 0 0 0 3 2 4 0 (178) ASN181 0 0 0 0 0 0 0 0 5 0 0 0 0 (181) LEU184 0 0 0 0 0 0 0 0 1 0 0 0 0 (192) THR195 0 0 0 0 0 0 0 0 2 0 0 0 0 (193) PHE196 0 0 0 0 0 0 0 0 4 0 0 0 0 (195) GLN198 0 0 0 0 0 0 1 4 0 0 0 0 0 (196) PRO199 0 0 0 0 0 0 0 0 5 0 0 0 0 (199) ALA202 0 0 0 0 0 0 0 3 0 0 0 0 0 chainB ( 28) TYR30 0 0 0 0 0 0 0 0 0 0 0 0 35 ( 64) ASN66 0 13 0 0 0 0 0 0 0 0 0 0 0 ( 94) ASN96 0 3 2 0 0 0 0 0 0 0 0 0 2 (103) SER105 0 6 0 0 0 0 0 0 0 0 0 0 0 (125) PRO127 9 0 0 0 0 0 0 0 0 0 0 0 0 (174) PHE176 6 0 0 0 0 0 0 0 0 0 0 0 0 (178) ILE180 8 0 1 0 0 0 0 0 0 0 0 0 1 (196) GLN198 0 0 0 0 0 0 0 0 0 0 0 4 8 (197) PRO199 0 0 0 0 0 0 0 0 0 0 0 0 13 (200) ALA202 0 0 0 0 0 0 0 0 0 0 0 0 1 chainC ( 28) TYR30 0 0 0 17 2 0 0 0 0 0 0 0 0 ( 62) ARG64 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 64) ASN66 0 0 0 0 0 11 0 0 0 0 0 0 0 ( 94) ASN96 0 0 0 0 4 5 0 0 0 0 0 0 0 (103) SER105 0 0 0 0 0 6 0 0 0 0 0 0 0 (125) PRO127 0 0 0 0 0 0 11 0 0 0 0 0 0 (174) PHE176 0 0 0 0 0 0 8 0 0 0 0 0 0 (178) ILE180 0 0 0 0 0 0 9 0 0 0 0 0 0 (196) GLN198 0 0 0 7 0 0 0 0 0 0 0 0 0 (197) PRO199 0 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence yqelaiqfaaqavdrneieqwvrefaYqgfdarrviellkqyggadwekdakkmivlaltrgNkprrmmmkmskegkatvealinkyklkegNpsrdeltlSrvaaalagrtcqalvvlsewlPvtgttmdglspayprhmmhPsfagmvdpslpgdylraildahslyLlqFSrvINpnLrgrtkeevaaTFtQPmnAavnsnfishekrreflkafglvdsngkpsaavmaaaqayktaa/nyqelaiqfaaqavdrneieqwvrefaYqgfdarrviellkqyggadwekdakkmivlaltrgNkprrmmmkmskegkatvealinkyklkegNpsrdeltlSrvaaalagrtcqalvvlsewlPvtgttmdglspayprhmmhpsfagmvdpslpgdylraildahslyllqFsrvInpnlrgrtkeevaatftQPmnAavnsnfishekrreflkafglvdsngkpsaavmaaaqayktaa/nyqelaiqfaaqavdrneieqwvrefaYqgfdarrviellkqyggadwekdakkmivlaltRgNkprrmmmkmskegkatvealinkyklkegNpsrdeltlSrvaaalagrtcqalvvlsewlPvtgttmdglspayprhmmhpsfagmvdpslpgdylraildahslyllqFsrvInpnlrgrtkeevaatftQPmnaavnsnfishekrreflkafglvdsngkpsaavmaaaqayktaa >4h5q_B:UBA-like; title=CRYSTAL STRUCTURE OF RIFT VALLEY FEVER VIRUS NUCLEOCAPSID PROTEIN HEXAMER BOUND TO SINGLE-STRANDED DNA organism=Rift valley fever virus DNA sequence DT(D13) DT(D12) DT(D11) DT(D1) DT(D2) DT(D3) DT(D4) DT(D5) DT(D6) DT(D7) DT(D8) DT(D9) DT(D10):DT(D11) chainB ( 28) TYR30 0 0 0 0 0 0 0 0 0 0 0 0 35 ( 64) ASN66 0 13 0 0 0 0 0 0 0 0 0 0 0 ( 94) ASN96 0 3 2 0 0 0 0 0 0 0 0 0 2 (103) SER105 0 6 0 0 0 0 0 0 0 0 0 0 0 (125) PRO127 9 0 0 0 0 0 0 0 0 0 0 0 0 (174) PHE176 6 0 0 0 0 0 0 0 0 0 0 0 0 (178) ILE180 8 0 1 0 0 0 0 0 0 0 0 0 1 (196) GLN198 0 0 0 0 0 0 0 0 0 0 0 4 8 (197) PRO199 0 0 0 0 0 0 0 0 0 0 0 0 13 (200) ALA202 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence nyqelaiqfaaqavdrneieqwvrefaYqgfdarrviellkqyggadwekdakkmivlaltrgNkprrmmmkmskegkatvealinkyklkegNpsrdeltlSrvaaalagrtcqalvvlsewlPvtgttmdglspayprhmmhpsfagmvdpslpgdylraildahslyllqFsrvInpnlrgrtkeevaatftQPmnAavnsnfishekrreflkafglvdsngkpsaavmaaaqayktaa >4h8k_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF LC11-RNASE H1 IN COMPLEX WITH RNA/DNA HYBRID organism=uncultured organism DNA sequence DG(D1) DG(D2) DA(D3) DA(D4) DT(D5) DC(D6) DA(D7) DG(D8) DG(D9) DT(D10) DG(D11) DT(D12) DC(D13) DG(D14) chainA ( 13) ASN15 0 0 0 0 0 0 0 0 1 3 0 0 0 0 ( 43) ASN45 0 0 0 0 0 0 0 0 0 0 7 0 0 0 ( 44) ASN46 0 0 0 0 0 0 0 0 0 0 10 0 0 0 ( 78) LEU80 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 87) TYR89 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence kiiiytdggargNpgpagigvvitdekgntlhessayigettNNvaeyealiraledlqmfgdklvdmevevrmnseLivrqmqgvYkvkeptlkekfakiahikmervpnlvfvhipreknaradelvneaidkals >4h8k_AB:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF LC11-RNASE H1 IN COMPLEX WITH RNA/DNA HYBRID organism=uncultured organism DNA sequence DG(D1) DG(D2) DA(D3) DA(D4) DT(D5) DC(D6) DA(D7) DG(D8) DG(D9) DT(D10) DG(D11) DT(D12) DC(D13) DG(D14) chainA ( 13) ASN15 0 0 0 0 0 0 0 0 1 3 0 0 0 0 ( 43) ASN45 0 0 0 0 0 0 0 0 0 0 7 0 0 0 ( 44) ASN46 0 0 0 0 0 0 0 0 0 0 10 0 0 0 ( 78) LEU80 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 87) TYR89 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainB ( 13) ASN15 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 43) ASN45 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 44) ASN46 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 78) LEU80 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence kiiiytdggargNpgpagigvvitdekgntlhessayigettNNvaeyealiraledlqmfgdklvdmevevrmnseLivrqmqgvYkvkeptlkekfakiahikmervpnlvfvhipreknaradelvneaidkals/kiiiytdggargNpgpagigvvitdekgntlhessayigettNNvaeyealiraledlqmfgdklvdmevevrmnseLivrqmqgvykvkeptlkekfakiahikmervpnlvfvhipreknaradelvneaidkals >4hc7_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE FULL DNA BINDING DOMAIN OF GATA3-COMPLEX 2 organism=Homo sapiens DNA sequence DG(X3):DC(W20) DG(X4):DC(W19) DT(X5):DA(W18) DT(X6):DA(W17) DA(X7):DT(W16) DT(X8):DA(W15) DC(X9):DG(W14) DT(X10):DA(W13) DC(X11):DG(W12) DT(X12):DA(W11) DG(X13):DC(W10) DA(X14):DT(W9) DT(X15):DA(W8) DT(X16):DA(W7) DT(X17):DA(W6) DA(X18):DT(W5) DG(X19):DC(W4) DG(X20):DC(W3) chainA ( 69) THR327 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LEU328 0 0 0 0 0 2 2 2 2 0 0 0 0 0 0 0 0 0 ( 72) ARG330 0 0 0 0 0 4 11 3 0 0 0 0 0 0 0 0 0 0 ( 82) ASN340 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) LEU344 0 0 0 6 5 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) LEU348 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG365 0 0 15 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmgrecvncgatstplwrrdgtghylcnacglyhkmngqnrplikpkrrlsaarragtscancqttttTLwRrnangdpvcNacgLyykLhninrpltmkkegiqtRn >4hc9_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=DNA BINDING BY GATA TRANSCRIPTION FACTOR-COMPLEX 3 organism=Homo sapiens DNA sequence DC(Y3):DG(Z20) DC(Y4):DG(Z19) DT(Y5):DA(Z18) DA(Y6):DT(Z17) DA(Y7):DT(Z16) DA(Y8):DT(Z15) DT(Y9):DA(Z14) DC(Y10):DG(Z13) DA(Y11):DT(Z12) DG(Y12):DC(Z11) DA(Y13):DT(Z10) DG(Y14):DC(Z9) DA(Y15):DT(Z8) DT(Y16):DA(Z7) DA(Y17):DT(Z6) DA(Y18):DT(Z5) DC(Y19):DG(Z4) DC(Y20):DG(Z3) chainA ( 12) PRO273 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 13) LEU274 0 0 0 0 0 0 4 2 7 3 0 0 0 0 0 0 0 0 ( 15) ARG276 0 0 0 0 0 0 5 11 8 0 0 0 0 0 0 0 0 0 ( 25) ASN286 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU290 0 0 0 0 3 5 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence recvncgatstPLwRrdgtghylcNacgLyhkmngqnrplikpkrrlsaarragtscancqtttttlwrrnangdpvcnacglyyklhninrpltmkkegiqtrn >4hca_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=DNA BINDING BY GATA TRANSCRIPTION FACTOR-COMPLEX 1 organism=Homo sapiens DNA sequence DT(X3):DA(Y20) DG(X4):DC(Y19) DT(X5):DA(Y18) DC(X6):DG(Y17) DC(X7):DG(Y16) DA(X8):DT(Y15) DT(X9):DA(Y14) DC(X10):DG(Y13) DT(X11):DA(Y12) DG(X12):DC(Y11) DA(X13):DT(Y10) DT(X14):DA(Y9) DA(X15):DT(Y8) DA(X16):DT(Y7) DG(X17):DC(Y6) DA(X18):DT(Y5) DC(X19):DG(Y4) DG(X20):DC(Y3) chainA ( 14) PRO273 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 15) LEU274 0 0 0 0 0 0 2 2 2 1 0 0 0 0 0 0 0 0 ( 17) ARG276 0 0 0 0 0 0 4 13 2 0 0 0 0 0 0 0 0 0 ( 27) ASN286 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 ( 31) LEU290 0 0 0 0 4 4 3 0 0 0 0 0 0 0 0 0 0 0 ( 57) THR327 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 58) LEU328 0 0 0 0 0 0 0 0 5 2 3 0 0 0 0 0 0 0 ( 60) ARG330 0 0 0 0 0 0 0 0 8 12 2 0 0 0 0 0 0 0 ( 70) ASN340 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 ( 74) LEU344 0 0 0 0 0 0 0 0 0 0 1 4 9 0 0 0 0 0 ( 77) LYS347 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 78) LEU348 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 95) ARG365 0 0 0 0 0 0 0 0 0 0 0 16 9 13 0 0 0 0 ( 97) ARG367 0 0 0 0 0 0 0 0 0 3 5 5 0 0 0 0 0 0 prot.sequence mgrecvncgatstPLwRrdgtghylcNacgLyhkmngqnrplikptscancqttttTLwRrnangdpvcNacgLyyKLhninrpltmkkegiqtRnRkm >4hdu_A:Methylated_DNA-protein_cysteine_methyltransferase,_C-terminal_domain; title=CRYSTAL STRUCTURE OF S. POMBE ATL1 IN COMPLEX WITH DAMAGED DNA CONTAINING 2-AMINOPURINE organism=Schizosaccharomyces pombe DNA sequence DG(B1):DG(C26) DC(B2):DG(C25) DC(B3):DT(C24) DA(B4):DA(C23) DT(B5):DC(C22) DG(B6):DC(C21) DC(B8):DG(C20) DT(B9):DA(C19) DA(B10):DT(C18) DG(B11):DC(C17) DT(B12):DA(C16) DA(B13):DT(C15) chainA ( 39) ARG39 0 0 0 0 5 37 33 0 0 0 0 0 ( 40) GLN40 0 0 0 1 3 1 0 0 0 0 0 0 ( 43) GLN43 0 0 0 5 0 4 0 0 0 0 0 0 prot.sequence mrmdefytkvydavceipygkvstygeiaryvgmpsyaRQvgQamkhlhpethvpwhrvinsrgtiskrdisageqrqkdrleeegveiyqtslgeyklnlpeymwkp >4hdv_A:Methylated_DNA-protein_cysteine_methyltransferase,_C-terminal_domain; title=CRYSTAL STRUCTURE OF S. POMBE ATL1 IN COMPLEX WITH DAMAGED DNA CONTAINING 2,6-DIAMINOPURINE organism=Schizosaccharomyces pombe DNA sequence DT(C15):DA(B13) DA(C16):DT(B12) DC(C17):DG(B11) DT(C18):DA(B10) DA(C19):DT(B9) DG(C20):DC(B8) DC(C22):DG(B6) DA(C23):DT(B5) DT(C24):DA(B4) DG(C25):DC(B3) DG(C26):DC(B2) chainA ( 39) ARG39 0 0 0 0 0 35 38 0 0 0 0 ( 40) GLN40 0 0 0 0 0 0 5 1 0 0 0 ( 43) GLN43 0 0 0 0 0 0 3 5 0 0 0 prot.sequence mrmdefytkvydavceipygkvstygeiaryvgmpsyaRQvgQamkhlhpethvpwhrvinsrgtiskrdisageqrqkdrleeegveiyqtslgeyklnlpeymwkp >4hf1_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ISCR BOUND TO ITS PROMOTER organism=Escherichia coli DNA sequence DA(C1):DT(D29) DT(C2):DA(D28) DA(C3):DT(D27) DA(C4):DT(D26) DA(C5):DT(D25) DT(C6):DA(D24) DC(C7):DG(D23) DC(C8):DG(D22) DA(C9):DT(D21) DC(C10):DG(D20) DA(C11):DT(D19) DC(C12):DG(D18) DA(C13):DT(D17) DG(C14):DC(D16) DT(C15):DA(D15) DT(C16):DA(D14) DT(C17):DA(D13) DG(C18):DC(D12) DT(C19):DA(D11) DA(C20):DT(D10) DT(C21):DA(D9) DT(C22):DA(D8) DG(C23):DC(D7) DT(C24):DA(D6) DT(C25):DA(D5) DT(C26):DA(D4) DT(C27):DA(D3) DG(C28):DC(D2) DT(C29):DA(D1) chainA ( 38) SER38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 40) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 1 0 0 0 0 0 0 0 0 ( 41) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 ( 43) GLU43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 ( 61) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 4 0 prot.sequence mrltskgryavtamldvalnseagpvpladiserqgiSlSYlEQlfsrlrknglvssvRgPgggyllgkdassiavgevisavdesvdalthalwrdlsdrltgflnnitlgelvnnqevldvsgrqht >4hf1_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ISCR BOUND TO ITS PROMOTER organism=Escherichia coli DNA sequence DA(D1):DT(C29) DC(D2):DG(C28) DA(D3):DT(C27) DA(D4):DT(C26) DA(D5):DT(C25) DA(D6):DT(C24) DC(D7):DG(C23) DA(D8):DT(C22) DA(D9):DT(C21) DT(D10):DA(C20) DA(D11):DT(C19) DC(D12):DG(C18) DA(D13):DT(C17) DA(D14):DT(C16) DA(D15):DT(C15) DC(D16):DG(C14) DT(D17):DA(C13) DG(D18):DC(C12) DT(D19):DA(C11) DG(D20):DC(C10) DT(D21):DA(C9) DG(D22):DC(C8) DG(D23):DC(C7) DA(D24):DT(C6) DT(D25):DA(C5) DT(D26):DA(C4) DT(D27):DA(C3) DA(D28):DT(C2) DT(D29):DA(C1) chainA ( 38) SER38 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER40 0 0 0 0 0 0 0 0 1 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR41 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLU43 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PRO61 0 4 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 38) SER38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 40) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 1 0 0 0 0 0 0 0 0 ( 41) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 ( 43) GLU43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 1 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 ( 61) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 3 0 prot.sequence mrltskgryavtamldvalnseagpvpladiserqgiSlSYlEQlfsrlrknglvssvRgPgggyllgkdassiavgevisavdesvdalthalwrdlsdrltgflnnitlgelvnnqevldvsgrqht/mrltskgryavtamldvalnseagpvpladiserqgiSlSYlEQlfsrlrknglvssvRgPgggyllgkdassiavgevisavdaqgkggaqggdkalthalwrdlsdrltgflnnitlgelvnnqevl >4hf2_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF E43A ISCR MUTANT BOUND TO ITS PROMOTER organism=Escherichia coli DNA sequence DA(D1):DT(C29) DC(D2):DG(C28) DA(D3):DT(C27) DA(D4):DT(C26) DA(D5):DT(C25) DA(D6):DT(C24) DC(D7):DG(C23) DA(D8):DT(C22) DA(D9):DT(C21) DT(D10):DA(C20) DA(D11):DT(C19) DC(D12):DG(C18) DA(D13):DT(C17) DA(D14):DT(C16) DA(D15):DT(C15) DC(D16):DG(C14) DT(D17):DA(C13) DG(D18):DC(C12) DT(D19):DA(C11) DG(D20):DC(C10) DT(D21):DA(C9) DG(D22):DC(C8) DG(D23):DC(C7) DA(D24):DT(C6) DT(D25):DA(C5) DT(D26):DA(C4) DT(D27):DA(C3) DA(D28):DT(C2) DT(D29):DA(C1) chainA ( 38) SER38 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER40 0 0 0 0 0 0 0 0 4 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR41 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PRO61 0 3 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrltskgryavtamldvalnseagpvpladiserqgiSlSYlaQlfsrlrknglvssvRgPgggyllgkdassiavgevisavdesalthalwrdlsdrltgflnnitlgelvnn >4hf2_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF E43A ISCR MUTANT BOUND TO ITS PROMOTER organism=Escherichia coli DNA sequence DA(C1):DT(D29) DT(C2):DA(D28) DA(C3):DT(D27) DA(C4):DT(D26) DA(C5):DT(D25) DT(C6):DA(D24) DC(C7):DG(D23) DC(C8):DG(D22) DA(C9):DT(D21) DC(C10):DG(D20) DA(C11):DT(D19) DC(C12):DG(D18) DA(C13):DT(D17) DG(C14):DC(D16) DT(C15):DA(D15) DT(C16):DA(D14) DT(C17):DA(D13) DG(C18):DC(D12) DT(C19):DA(D11) DA(C20):DT(D10) DT(C21):DA(D9) DT(C22):DA(D8) DG(C23):DC(D7) DT(C24):DA(D6) DT(C25):DA(D5) DT(C26):DA(D4) DT(C27):DA(D3) DG(C28):DC(D2) DT(C29):DA(D1) chainA ( 38) SER38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 40) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 4 0 0 0 0 0 0 0 0 ( 41) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 ( 61) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 3 0 chainB ( 40) SER40 0 0 0 0 0 0 0 0 1 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR41 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN44 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PRO61 0 3 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrltskgryavtamldvalnseagpvpladiserqgiSlSYlaQlfsrlrknglvssvRgPgggyllgkdassiavgevisavdesalthalwrdlsdrltgflnnitlgelvnn/mrltskgryavtamldvalnseagpvpladiserqgislSYlaQlfsrlrknglvssvRgPgggyllgkdassiavgevisavdggdkalthalwrdlsdrltgflnnitlgelvnnqevl >4hht_A:Ribonuclease_H-like; title=T. MARITIMA RNASE H2 G21S IN COMPLEX WITH NUCLEIC ACID SUBSTRATE AND CALCIUM IONS organism=Thermotoga maritima DNA sequence DG(C1) DA(C2) DA(C3) DT(C4) DC(C5) DA(C6) DG(C7) DG(C8) DT(C9) DG(C10) DT(C11) DC(C12) chainA ( 21) ARG22 0 0 0 0 0 0 0 1 0 0 0 0 (153) TYR163 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence gidelykkefgivagvdeasRgclagpvvaaavvlekeiegindsrlldeimekaavgigiaspeeidlynifnatklamnralenlsvkpsfvlvdgkgielsvpgtclvkgdqkskligaasivakvfrdrlmsefhrmypqfsfhkhkgYatkehlneirkngvlpihrlsfepvlelltddllreffekglisenrferilnllgarksvvfrker >4hja_A:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF SCHIZOSACCHAROMYCES POMBE POT1PC BOUND TO SSDNA (ACGGTTACGGT) organism=Schizosaccharomyces pombe DNA sequence DG(B10) DG(B9) DC(B8) DA(B7) DA(B1) DC(B2) DG(B3) DG(B4) DT(B5) DT(B6):DA(B7) chainA ( 23) LYS25 3 9 2 0 0 0 0 0 0 0 ( 25) TRP27 3 65 0 0 0 0 0 0 0 0 ( 34) TYR36 0 2 1 2 0 0 0 0 0 2 ( 45) PHE47 0 0 0 41 0 0 0 0 0 41 ( 47) MET49 0 0 0 1 0 0 0 0 0 1 ( 53) SER55 1 0 0 0 0 0 0 0 0 0 ( 54) SER56 2 0 0 0 0 0 0 0 0 0 ( 55) ARG57 23 0 0 0 0 0 0 0 0 0 ( 66) ARG68 0 0 0 14 0 0 0 3 1 21 ( 68) ILE70 0 0 0 0 0 0 0 4 0 0 ( 70) TRP72 0 0 0 0 0 0 61 6 0 0 ( 71) ASP73 0 0 0 0 0 0 12 0 0 0 ( 95) LYS97 0 0 0 0 0 0 0 5 1 0 ( 97) ASP99 0 0 0 3 0 0 0 0 2 17 ( 98) HIS100 0 0 0 0 0 0 0 0 22 6 ( 99) LEU101 0 0 0 0 0 0 0 0 0 20 (101) TYR103 0 0 0 6 0 0 0 0 0 6 (103) GLU105 0 0 0 0 0 0 0 11 0 0 (105) ILE107 0 0 0 0 0 0 0 2 0 0 (107) HIS109 0 0 0 0 0 29 14 0 0 0 prot.sequence dsfsllsqitphqrcsfyaqviKtWYsdknftlYvtdytenelfFpMspytsSSRwrgpfgrfsiRcIlWDehdfycrnyikegdyvvmknvrtKiDHLgYlEcIlHgdsakrynmsiekvdseepelneiksrkrlyv >4hje_A:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF P53 CORE DOMAIN IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DA(F1):DT(E21) DG(F2):DC(E20) DG(F3):DC(E19) DC(F4):DG(E18) DT(F5):DA(E17) DT(F6):DA(E16) DG(F7):DC(E15) DT(F8):DA(E14) DC(F9):DG(E13) DT(F10):DA(E12) DC(F11):DG(E11) DT(F12):DA(E10) DA(F13):DT(E9) DA(F14):DT(E8) DC(F15):DG(E7) DT(F16):DA(E6) DT(F17):DA(E5) DG(F18):DC(E4) DT(F19):DA(E3) DG(F20):DC(E2) chainA ( 29) LYS120 2 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER121 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ALA276 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) CYS277 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) ARG280 0 0 2 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence plsssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk >4hje_ABCD: title=CRYSTAL STRUCTURE OF P53 CORE DOMAIN IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(E2):DG(F20) DA(E3):DT(F19) DC(E4):DG(F18) DA(E5):DT(F17) DA(E6):DT(F16) DG(E7):DC(F15) DT(E8):DA(F14) DT(E9):DA(F13) DA(E10):DT(F12) DG(E11):DC(F11) DA(E12):DT(F10) DG(E13):DC(F9) DA(E14):DT(F8) DC(E15):DG(F7) DA(E16):DT(F6) DA(E17):DT(F5) DG(E18):DC(F4) DC(E19):DG(F3) DC(E20):DG(F2) DT(E21):DA(F1) chainA ( 29) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 2 ( 30) SER121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (185) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (186) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (189) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 2 0 0 chainB ( 29) LYS120 0 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 0 ( 30) SER121 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (185) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (186) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (189) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 1 11 12 0 0 0 0 0 chainC ( 29) LYS120 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ALA276 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) CYS277 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) ARG280 0 1 13 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 29) LYS120 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER121 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (185) ALA276 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) CYS277 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) ARG280 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence plsssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk/plsssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk/plsssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk/plsssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk >4hkq_A:DNA/RNA_polymerases; title=XMRV REVERSE TRANSCRIPTASE IN COMPLEX WITH RNA/DNA HYBRID organism=Xenotropic MuLV-related virus DNA sequence DG(F34) DG(F35) DT(F36) DG(F37) DT(F38) DC(F39) DG(F40) DC(F41) DA(F42) DC(F43) DT(F44) DC(F45) DT(F46) DG(F47) chainA (158) PRO196 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (184) TYR222 0 0 0 0 0 0 0 0 0 0 0 0 5 0 prot.sequence dfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiqrlldqgilvpcqspwntpllpvkkdyrpvqdlrevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdqltwtrlpqgfknsPtlfdealhrdladfriqhpdlillqYvddlllaatseqdcqrgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqrwltearketvmgqptpktprqlreflgtagfcrlwipgfaemaaplypltktlfnwgpdqqkayqeikqalltapalglpdltkpfelfvdekqgyakgvltqklgpwrrpvaylskkldpvaagwppclrmvaaiavltkdagkltmgqplvilaphavealvkqpparmthyqamlldtdrvqfgpvvalnpatllplp >4hly_B:"Winged_helix"_DNA-binding_domain; title=THE COMPLEX CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF VIRF-1 FROM THE ONCOGENIC KSHV WITH DNA organism=HUMAN HERPESVIRUS 8 DNA sequence DG(C1):DC(D12) DC(C2):DG(D11) DG(C3):DC(D10) DT(C4):DA(D9) DC(C5):DG(D8) DG(C6):DA(D7) DA(C7):DG(D6) DG(C8):DC(D5) DA(C9):DT(D4) DC(C10):DG(D3) DG(C11):DC(D2) DC(C12):DG(D1) chainB ( 82) ARG84 0 0 0 0 0 0 0 1 9 13 4 0 prot.sequence kasikdwivcqvnsgkfpgvewedeertrfripvtpladpcfewrrdgelgvvyirergnmpvdasfkgtrgrrrmlaalrRtrglqeigkgisqdghhflvfrvr >4hn5_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN - TSLP NGRE COMPLEX organism=Homo sapiens DNA sequence DA(D842):DT(C872) DG(D843):DC(C871) DC(D844):DG(C870) DT(D845):DA(C869) DC(D846):DG(C868) DT(D847):DA(C867) DC(D848):DG(C866) DC(D849):DG(C865) DC(D850):DG(C864) DG(D851):DC(C863) DG(D852):DC(C862) DA(D853):DT(C861) DG(D854):DC(C860) DG(D855):DC(C859) DC(D856):DG(C858) DG(D857):DC(C857) chainA ( 24) LYS442 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 ( 25) VAL443 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 ( 29) ARG447 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) LYS442 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 ( 30) ARG447 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 6 prot.sequence klclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea/pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >4hn5_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN - TSLP NGRE COMPLEX organism=Homo sapiens DNA sequence DA(D842):DT(C872) DG(D843):DC(C871) DC(D844):DG(C870) DT(D845):DA(C869) DC(D846):DG(C868) DT(D847):DA(C867) DC(D848):DG(C866) DC(D849):DG(C865) DC(D850):DG(C864) DG(D851):DC(C863) DG(D852):DC(C862) DA(D853):DT(C861) DG(D854):DC(C860) DG(D855):DC(C859) DC(D856):DG(C858) DG(D857):DC(C857) chainB ( 25) LYS442 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 ( 30) ARG447 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 6 prot.sequence pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >4hn6_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN R460D/D462R - TSLP NGRE COMPLEX organism=Homo sapiens DNA sequence DC(C857):DG(D857) DG(C858):DC(D856) DC(C859):DG(D855) DC(C860):DG(D854) DT(C861):DA(D853) DC(C862):DG(D852) DC(C863):DG(D851) DG(C864):DC(D850) DG(C865):DC(D849) DG(C866):DC(D848) DA(C867):DT(D847) DG(C868):DC(D846) DA(C869):DT(D845) DG(C870):DC(D844) DC(C871):DG(D843) DT(C872):DA(D842) chainA ( 24) LYS442 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 ( 25) VAL443 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 ( 29) ARG447 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 chainB ( 24) LYS442 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 25) VAL443 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG447 9 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klclvcsdeasgchygvltcgscKVffkRavegqhnylcagdnrciidkirrkncpacryrkclqagmnlea/klclvcsdeasgchygvltcgscKVffkRavegqhnylcagdnrciidkirrkncpacryrkclqagmnlea >4hn6_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GR DNA BINDING DOMAIN R460D/D462R - TSLP NGRE COMPLEX organism=Homo sapiens DNA sequence DC(C857):DG(D857) DG(C858):DC(D856) DC(C859):DG(D855) DC(C860):DG(D854) DT(C861):DA(D853) DC(C862):DG(D852) DC(C863):DG(D851) DG(C864):DC(D850) DG(C865):DC(D849) DG(C866):DC(D848) DA(C867):DT(D847) DG(C868):DC(D846) DA(C869):DT(D845) DG(C870):DC(D844) DC(C871):DG(D843) DT(C872):DA(D842) chainB ( 24) LYS442 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 25) VAL443 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG447 9 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klclvcsdeasgchygvltcgscKVffkRavegqhnylcagdnrciidkirrkncpacryrkclqagmnlea >4hp1_C: title=CRYSTAL STRUCTURE OF TET3 IN COMPLEX WITH A NON-CPG DSDNA organism=XENOPUS (SILURANA) TROPICALIS / XENOPUS (SILURANA) TROPICALIS DNA sequence DG(A1):DC(B12) DC(A2):DG(B11) DC(A3):DG(B10) DA(A4):DT(B9) DC(A5):DG(B8) 5CM(A6):DG(B7) DG(A7):5CM(B6) DG(A8):DC(B5) DT(A9):DA(B4) DG(A10):DC(B3) DG(A11):DC(B2) DC(A12):DG(B1) chainC ( 3) LYS61 0 0 5 0 3 0 0 0 0 0 0 0 ( 32) HIS90 0 0 0 16 15 19 0 0 0 0 0 0 ( 33) GLN91 0 0 0 0 0 10 5 0 0 0 0 0 ( 39) LYS97 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence nkKrkrcgvcvpclrkepcgacyncvnrstsHQickmrkceqlkkkrvvpm >4hp3_C: title=CRYSTAL STRUCTURE OF TET3 IN COMPLEX WITH A CPG DSDNA organism=XENOPUS (SILURANA) TROPICALIS / XENOPUS (SILURANA) TROPICALIS DNA sequence DG(B1):DC(A12) DC(B2):DG(A11) DC(B3):DG(A10) DA(B4):DT(A9) DA(B5):DT(A8) DC(B6):DG(A7) DG(B7):DC(A6) DT(B8):DA(A5) DT(B9):DA(A4) DG(B10):DC(A3) DG(B11):DC(A2) DC(B12):DG(A1) chainC ( 3) LYS61 0 0 0 0 0 0 0 0 4 0 0 0 ( 32) HIS90 0 0 0 0 0 14 15 12 0 0 0 0 ( 33) GLN91 0 0 0 0 5 7 8 0 0 0 0 0 prot.sequence nkKrkrcgvcvpclrkepcgacyncvnrstsHQickmrkceqlkkkrvvpm >4hqe_A:"Winged_helix"_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF QSRR-DNA COMPLEX organism=Staphylococcus aureus DNA sequence DA(D1):DT(C17) DG(D2):DC(C16) DT(D3):DA(C15) DA(D4):DT(C14) DT(D5):DA(C13) DA(D6):DT(C12) DA(D7):DT(C11) DT(D8):DA(C10) DT(D9):DA(C9) DA(D10):DT(C8) DT(D11):DA(C7) DT(D12):DA(C6) DA(D13):DT(C5) DT(D14):DA(C4) DA(D15):DT(C3) DC(D16):DG(C2) DC(D17):DG(C1) chainA ( 37) PHE37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 ( 48) THR48 0 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 ( 49) PRO49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 ( 50) ARG50 0 0 0 0 0 0 0 0 0 0 0 8 14 3 0 0 0 ( 51) ALA51 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 54) LEU54 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mmevcpyleetfkilgrswngliinylsrcndcsahFsdmkrdlktiTPRAlsLklselaqwelvekqiistspvqiiyvltekgkalaealhpieawaqsyvdl >4hqe_AB:"Winged_helix"_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF QSRR-DNA COMPLEX organism=Staphylococcus aureus DNA sequence DG(C1):DC(D17) DG(C2):DC(D16) DT(C3):DA(D15) DA(C4):DT(D14) DT(C5):DA(D13) DA(C6):DT(D12) DA(C7):DT(D11) DT(C8):DA(D10) DA(C9):DT(D9) DA(C10):DT(D8) DT(C11):DA(D7) DT(C12):DA(D6) DA(C13):DT(D5) DT(C14):DA(D4) DA(C15):DT(D3) DC(C16):DG(D2) DT(C17):DA(D1) chainA ( 37) PHE37 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) THR48 0 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 ( 49) PRO49 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG50 0 0 0 3 14 8 0 0 0 0 0 0 0 0 0 0 0 ( 51) ALA51 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU54 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainB ( 35) PHE37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 ( 36) SER38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 46) THR48 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 ( 47) PRO49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 ( 48) ARG50 0 0 0 0 0 0 0 0 0 0 0 8 11 4 0 0 0 ( 49) ALA51 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mmevcpyleetfkilgrswngliinylsrcndcsahFsdmkrdlktiTPRAlsLklselaqwelvekqiistspvqiiyvltekgkalaealhpieawaqsyvdl/evcpyleetfkilgrswngliinylsrcndcsahFSdmkrdlktiTPRAlslklselaqwelvekqiistspvqiiyvltekgkalaealhpieawaqsyvdltdqrt >4hqu_A:Cystine-knot_cytokines; title=CRYSTAL STRUCTURE OF HUMAN PDGF-BB IN COMPLEX WITH A MODIFIED NUCLEOTIDE APTAMER (SOMAMER SL5) organism=Homo sapiens DNA sequence DG(C22) DA(C19) DG(C15) DC(C14) DG(C13) DC(C12) DC(C10) DA(C9) DG(C6) DC(C4):DG(C6) chainA ( 77) ILE83 0 4 0 0 0 0 0 0 0 0 ( 78) PHE84 0 11 0 0 0 0 0 0 0 0 prot.sequence iaepamiaecktrtevfeisrrlidrtnanflvwppcvevqrcsgccnnrnvqcrptqvqlrpvqvrkieivrkkpIFkkatvtledhlackcet >4hqx_A:Cystine-knot_cytokines; title=CRYSTAL STRUCTURE OF HUMAN PDGF-BB IN COMPLEX WITH A MODIFIED NUCLEOTIDE APTAMER (SOMAMER SL4) organism=Homo sapiens DNA sequence DG(C22) DA(C19) DG(C15) DC(C14) DG(C13) DC(C12) DC(C10) DA(C9) DG(C6) DC(C4):DG(C6) chainA ( 77) ILE83 0 4 0 0 0 0 0 0 0 0 ( 78) PHE84 0 9 0 0 0 0 0 0 0 0 prot.sequence iaepamiaecktrtevfeisrrlidrtnanflvwppcvevqrcsgccnnrnvqcrptqvqlrpvqvrkieivrkkpIFkkatvtledhlackcet >4hri_AB:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF HETR IN COMPLEX WITH A 21-BP PALINDROMIC DNA AT THE UPSTREAM OF THE HETP PROMOTER FROM ANABAENA organism=NOSTOC DNA sequence DA(D1):DT(C21) DT(D2):DA(C20) DG(D3):DC(C19) DA(D4):DT(C18) DG(D5):DC(C17) DG(D6):DC(C16) DG(D7):DC(C15) DG(D8):DC(C14) DT(D9):DA(C13) DT(D10):DA(C12) DA(D11):DT(C11) DG(D12):DC(C10) DA(D13):DT(C9) DC(D14):DG(C8) DC(D15):DG(C7) DC(D16):DG(C6) DC(D17):DG(C5) DT(D18):DA(C4) DC(D19):DG(C3) DG(D20):DC(C2) DC(D21):DG(C1) chainB ( 60) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 16 0 ( 69) GLU71 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 1 0 0 0 0 0 ( 71) LYS73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 chainA ( 59) ARG62 0 17 15 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLU71 0 0 0 0 0 6 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LYS73 0 0 0 0 4 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence didlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkiiveevrqalmegkllktlgsqepryliqfpyvwmeqypseekrqiehklpsnlpdaqlvtsfeflelieflhkrsqedlppehrmelsealaehikrrllysgtvtridspwgmpfyaltrpfyertyimvedtaryfrmmkdwaekrpnamraleeldvpperwdeamqeldeiirtwadkyhqvpmilqmvfgrke/ndidlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkiiveevrqalmegkllktlgsqepryliqfpyvwmeqypwippgtsltseekrqiehklpsnlpdaqlvtsfeflelieflhkrsqedlppehrmelsealaehikrrllysgtvtridspwgmpfyaltrpertyimvedtaryfrmmkdwaekrpnamraleeldvpperwdeamqeldeiirtwadkyhqvipmilqmvfgrk >4hri_B:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF HETR IN COMPLEX WITH A 21-BP PALINDROMIC DNA AT THE UPSTREAM OF THE HETP PROMOTER FROM ANABAENA organism=NOSTOC DNA sequence DG(C1):DC(D21) DC(C2):DG(D20) DG(C3):DC(D19) DA(C4):DT(D18) DG(C5):DC(D17) DG(C6):DC(D16) DG(C7):DC(D15) DG(C8):DC(D14) DT(C9):DA(D13) DC(C10):DG(D12) DT(C11):DA(D11) DA(C12):DT(D10) DA(C13):DT(D9) DC(C14):DG(D8) DC(C15):DG(D7) DC(C16):DG(D6) DC(C17):DG(D5) DT(C18):DA(D4) DC(C19):DG(D3) DA(C20):DT(D2) DT(C21):DA(D1) chainB ( 60) ARG62 0 16 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) GLU71 0 0 0 0 0 1 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LYS73 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ndidlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkiiveevrqalmegkllktlgsqepryliqfpyvwmeqypwippgtsltseekrqiehklpsnlpdaqlvtsfeflelieflhkrsqedlppehrmelsealaehikrrllysgtvtridspwgmpfyaltrpertyimvedtaryfrmmkdwaekrpnamraleeldvpperwdeamqeldeiirtwadkyhqvipmilqmvfgrk >4hsb_A:DNA-glycosylase; title=S. POMBE 3-METHYLADENINE DNA GLYCOSYLASE-LIKE PROTEIN MAG2 BOUND TO DAMAGED DNA organism=Schizosaccharomyces pombe 972h- DNA sequence DG(B2):DC(C12) DG(B3):DC(C11) DA(B4):DT(C10) DT(B6):DA(C8) 3DR(B7):DT(C7) DA(B8):DT(C6) DC(B9):DG(C5) DG(B10):DC(C4) DG(B11):DC(C3) chainA ( 49) LYS53 0 0 0 0 2 0 0 0 0 ( 50) LEU54 0 0 0 10 13 0 0 0 0 ( 54) ALA58 0 0 0 2 0 0 0 0 0 ( 92) SER96 0 0 0 0 4 0 0 0 0 ( 95) LYS99 0 0 0 0 6 0 0 0 0 prot.sequence sdykraekhlssidnkwsslvkkvgpctltphpehapyegiiraitsQKLsdaAtnsiinkfctqcsdndefptpkqimetdvetlhecgfSklKsqeihivaeaalnkqipskseiekmseeelmeslskikgvkrwtiemysiftlgrldimpaddstlkneakeffglsskpqteevekltkpckpyrtiaawylwqipklh >4ht4_A: title=MOLECULAR BASIS OF VANCOMYCIN RESISTANCE TRANSFER IN STAPHYLOCOCCUS AUREUS organism=Staphylococcus aureus DNA sequence DG(B3):DC(B19) DC(B4):DG(B18) DG(B5):DC(B17) DA(B6):DT(B16) DA(B7):DT(B15) DC(B8):DG(B14) DG(B9):DC(B13) DG(B10):DA(B12) chainA ( 77) ARG78 0 0 0 7 5 0 0 0 (150) ARG151 9 12 16 0 0 0 0 0 (153) ASN154 7 6 4 0 0 0 0 0 (155) TYR156 5 0 0 0 0 0 0 0 prot.sequence amyhfqnkfvskangqsataksafnsasrikdfkenefkdysnkqcdyseillpnnaddkfkdreylwnkvhdvenRknsqvareiiiglpnefdpnsnielakefaeslsnegmivdlnihkineenphahllctlrgldknnefepkRkgNdYirdwntkekhnewrkrwenvqnkhlekngfsvrvsadsy >4htu_B:Ribonuclease_H-like; title=STRUCTURE OF 5-CHLOROURACIL MODIFIED A:U BASE PAIR organism=BACILLUS HALODURANS DNA sequence DC(E1):DG(F24) DG(E2):DC(F23) DC(E3):DG(F22) DG(E4):DC(F21) DA(E5):DT(F19) DA(E6):DA(F18) DT(E7):DA(F17) chainB ( 17) ASN77 3 0 0 0 0 0 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtnnmgeflaivhglrylkernsrkpiysnsqTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadyg >4hue_A:Ribonuclease_H-like; title=STRUCTURE OF 5-CHLOROURACIL MODIFIED G:U BASE PAIR organism=BACILLUS HALODURANS DNA sequence DC(D13):DG(C12) DG(D14):DC(C11) DC(D15):DG(C10) DG(D16):DT(C8) DA(D17):DT(C7) DA(D18):DA(C6) DT(D19):DA(C5) DT(D20):DG(C4) DG(D22):DC(C3) DC(D23):DG(C2) DG(D24):DC(C1) chainA ( 17) ASN77 0 0 0 0 0 0 0 0 0 0 5 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtnNmgeflaivhglrylkernsrkpiysnsqTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadyg >4huf_B:Ribonuclease_H-like; title=STRUCTURE OF 5-CHLOROURACIL MODIFIED A:U BASE PAIR organism=BACILLUS HALODURANS DNA sequence DA(F17):DT(E8) DA(F18):DA(E6) DT(F20):DA(E5) DC(F21):DG(E4) DG(F22):DC(E3) DC(F23):DG(E2) DG(F24):DC(E1) chainB ( 17) ASN77 0 0 0 0 0 0 1 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtnnmgeflaivhglrylkernsrkpiysnsqTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeika >4hug_A:Ribonuclease_H-like; title=STRUCTURE OF 5-CHLOROURACIL MODIFIED A:U BASE PAIRS organism=BACILLUS HALODURANS DNA sequence DC(C1):DG(D24) DG(C2):DC(D23) DC(C3):DG(D22) DG(C4):DC(D21) DA(C5):DA(D18) DA(C6):DA(D17) DC(C9):DG(D16) DG(C10):DC(D15) DC(C11):DG(D14) DG(C12):DC(D13) chainA ( 17) ASN77 5 1 0 0 0 0 0 0 0 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtnnmgeflaivhglrylkernsrkpiysnsqTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadyg >4i2o_AB:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE STRUCTURE OF FIXK2 FROM BRADYRHIZOBIUM JAPONICUM organism=Bradyrhizobium japonicum DNA sequence DC(X3):DG(W26) DT(X4):DA(W25) DA(X5):DT(W24) DT(X6):DA(W23) DC(X7):DG(W22) DT(X8):DA(W21) DT(X9):DA(W20) DG(X10):DC(W19) DA(X11):DT(W18) DT(X12):DA(W17) DT(X13):DA(W16) DT(X14):DA(W15) DC(X15):DG(W14) DA(X16):DT(W13) DA(X17):DT(W12) DT(X18):DA(W11) DC(X19):DG(W10) DA(X20):DT(W9) DA(X21):DT(W8) DT(X22):DA(W7) DT(X23):DA(W6) DC(X24):DG(W5) DC(X25):DG(W4) DC(X26):DG(W3) chainA (157) THR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (158) LEU195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (159) GLU196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 5 0 0 0 0 0 0 (160) THR197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (162) SER199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 (163) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 14 0 0 0 0 0 0 chainB (157) THR194 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LEU195 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) GLU196 0 0 0 0 0 0 5 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) THR197 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) SER199 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ARG200 0 0 0 0 0 0 15 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lvatefsyrkdeeiygedepaeyvyqvvtgavrsykllsdgrrqigafhlpgdvfglesgpshrlaaeaiidtsvrlvkrsslekaagidvqvarklwamtagelrhaedhmlllgrktamervatfllemdrrlavagmmalpmsrrdigdylglTLETvSRalsqlhtqgilgfsgarqivlrnrqrlhnldaaaa/lvatefsyrkdeeiygedepaeyvyqvvtgavrsykllsdgrrqigafhlpgdvfglesgpshrlaaeaiidtsvrlvkrsslekaagidvqvarklwamtagelrhaedhmlllgrktamervatfllemdrrlavagmmalpmsrrdigdylglTLETvSRalsqlhtqgilgfsgarqivlrnrqrlhnldaaaa >4i2o_B:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE STRUCTURE OF FIXK2 FROM BRADYRHIZOBIUM JAPONICUM organism=Bradyrhizobium japonicum DNA sequence DC(X3):DG(W26) DT(X4):DA(W25) DA(X5):DT(W24) DT(X6):DA(W23) DC(X7):DG(W22) DT(X8):DA(W21) DT(X9):DA(W20) DG(X10):DC(W19) DA(X11):DT(W18) DT(X12):DA(W17) DT(X13):DA(W16) DT(X14):DA(W15) DC(X15):DG(W14) DA(X16):DT(W13) DA(X17):DT(W12) DT(X18):DA(W11) DC(X19):DG(W10) DA(X20):DT(W9) DA(X21):DT(W8) DT(X22):DA(W7) DT(X23):DA(W6) DC(X24):DG(W5) DC(X25):DG(W4) DC(X26):DG(W3) chainB (157) THR194 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LEU195 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) GLU196 0 0 0 0 0 0 5 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) THR197 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) SER199 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ARG200 0 0 0 0 0 0 15 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lvatefsyrkdeeiygedepaeyvyqvvtgavrsykllsdgrrqigafhlpgdvfglesgpshrlaaeaiidtsvrlvkrsslekaagidvqvarklwamtagelrhaedhmlllgrktamervatfllemdrrlavagmmalpmsrrdigdylglTLETvSRalsqlhtqgilgfsgarqivlrnrqrlhnldaaaa >4i3h_A:Type_II_DNA_topoisomerase;Ribosomal_protein_S5_domain_2-like;ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase; title=A THREE-GATE STRUCTURE OF TOPOISOMERASE IV FROM STREPTOCOCCUS PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DG(G8):DC(H27) DG(G9):DC(H26) DT(G10):DA(H25) DA(G11):DT(H24) DA(G12):DT(H23) DT(G13):DA(H22) DA(G14):DT(H21) DC(G15):DG(H20) DG(G16):DC(H19) DG(G17):DC(H18) DT(G18):DA(H17) DT(G19):DA(H16) DA(G20):DT(H15) DT(G21):DA(H14) DC(G22):DG(H13) DC(G23):DG(H12) DA(G24):DT(H11) DC(G25):DG(H10) DA(G26):DT(H9) DG(G27):DC(H8) chainA (387) LYS458 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 (573) TYR1020 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (633) SER1080 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (723) ILE1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 21 0 0 0 prot.sequence avrkrpgmyigstdgaglhhlvweivdnavdealsdridvtinkdgsltvqdhtveviftilhaggkflhgvgssvvnalsswleveitrdgavykqrfenggkpvttlkkigtapksktgtkvtfmpdatifsttdfkyntiserlnesafllknvtlsltdkrtdeaiefhyengvqdfvsylnedkeiltpvlyfegedngfqvevalqyndgfsdnilsfvnnvrtkdggthetglksaitkvmndyarktgllkekegsdyreglaavlsilvpeehlqfegqtkdklgsplarpvvdgivadkltfflmengelasnlirkaikardareaarkargkltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskgayawdgeleelrlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkftleniqnmsledimgerfgrYskyiiqdralpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled >4i3h_AB:Type_II_DNA_topoisomerase;Ribosomal_protein_S5_domain_2-like;ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase; title=A THREE-GATE STRUCTURE OF TOPOISOMERASE IV FROM STREPTOCOCCUS PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DG(G8):DC(H27) DG(G9):DC(H26) DT(G10):DA(H25) DA(G11):DT(H24) DA(G12):DT(H23) DT(G13):DA(H22) DA(G14):DT(H21) DC(G15):DG(H20) DG(G16):DC(H19) DG(G17):DC(H18) DT(G18):DA(H17) DT(G19):DA(H16) DA(G20):DT(H15) DT(G21):DA(H14) DC(G22):DG(H13) DC(G23):DG(H12) DA(G24):DT(H11) DC(G25):DG(H10) DA(G26):DT(H9) DG(G27):DC(H8) chainA (387) LYS458 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 (573) TYR1020 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (633) SER1080 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (723) ILE1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 21 0 0 0 chainB (391) LYS458 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (631) SER1080 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (721) ILE1170 0 0 0 16 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence avrkrpgmyigstdgaglhhlvweivdnavdealsdridvtinkdgsltvqdhtveviftilhaggkflhgvgssvvnalsswleveitrdgavykqrfenggkpvttlkkigtapksktgtkvtfmpdatifsttdfkyntiserlnesafllknvtlsltdkrtdeaiefhyengvqdfvsylnedkeiltpvlyfegedngfqvevalqyndgfsdnilsfvnnvrtkdggthetglksaitkvmndyarktgllkekegsdyreglaavlsilvpeehlqfegqtkdklgsplarpvvdgivadkltfflmengelasnlirkaikardareaarkargkltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskgayawdgeleelrlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkftleniqnmsledimgerfgrYskyiiqdralpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/egldavrkrpgmyigstdgaglhhlvweivdnavdealsgfdridvtinkdgsltvqdhtveviftilhaggkfgvgssvvnalsswleveitrdgavykqrfenggkpvttlkkigtapktgtkvtfmpdatifsttdfkyntiserlnesafllknvtlsltdkrtdeaiefhyengvqdfvsylnedkeiltpvlyfegedngfqvevalqyndgfsdnilsfvnnvrtkdggthetglksaitkvmndyarktgllnlegsdyreglaavlsilvpeehlqfegqtkdklgsplarpvvdgivadkltfflmengelasnlirkaikardareaarkardesgkltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmawtdgeleellqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkftsniqnmsledimgerfgryskyiiqdralpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled >4i7y_H:Trypsin-like_serine_proteases; title=CRYSTAL STRUCTURE OF HUMAN ALPHA THROMBIN IN COMPLEX WITH A 27-MER APTAMER BOUND TO EXOSITE II organism=HOMO SAPIENS DNA sequence DG(D1):DC(D27) DT(D2):DA(D26) DC(D3):DG(D25) DT(D24) DC(D4):DG(D23) DG(D5):DG(D16) DT(D6):DA(D15) DC(D14) DG(D13) DG(D7):DG(D12) DG(D22) DG(D21) DG(D8):DG(D20) DT(D9) DA(D10):DT(D19) DT(D18) DG(D11):DG(D17) chainH ( 85) TYR89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 ( 88) PRO92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 ( 89) ARG93 0 0 0 0 0 0 0 0 0 0 0 5 16 3 4 0 0 ( 91) ASN95 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 98) ARG101 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (130) LEU130 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) ILE162 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) ARG165 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ASP178 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (178) PHE181 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) HIS230 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ARG233 0 0 0 0 1 0 0 0 0 0 4 0 0 0 0 0 0 (241) TRP237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (245) VAL241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (249) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 prot.sequence ivegsdaeigmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkhsrtryerniekismlekiYihPRyNwrenldRdialmklkkpvafsdyihpvclpdretaaslLqagykgrvtgwgnlkegqpsvlqvvnlpIveRpvCkdstriritDnmFcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfytHvfRlkkWiqkVidqFg >4i9q_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF THE D714A MUTANT OF RB69 DNA POLYMERASE organism=Enterobacteria phage RB69 DNA sequence DG(T5):DC(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (657) LYS706 0 7 5 0 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwamegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekka >4ibu_AC: title=HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273C AND SECOND-SITE SUPPRESSOR MUTATION T284R IN SEQUENCE-SPECIFIC COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(G1):DG(H12) DG(G2):DC(H11) DG(G3):DC(H10) DG(G4):DC(H9) DC(G5):DG(H8) DA(G6):DT(H7) DT(G7):DA(H6) DG(G8):DC(H5) DC(G9):DG(H4) DC(G10):DG(H3) DC(G11):DG(H2) DG(G12):DC(H1) DC(E1):DG(F12) DG(E2):DC(F11) DG(E3):DC(F10) DG(E4):DC(F9) DC(E5):DG(F8) DA(E6):DT(F7) DT(E7):DA(F6) DG(E8):DC(F5) DC(E9):DG(F4) DC(E10):DG(F3) DC(E11):DG(F2) chainA ( 25) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 ( 26) SER121 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 28) THR123 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 44) LYS139 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 (181) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 14 0 0 0 0 0 (189) ARG284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainC ( 25) LYS120 0 0 0 0 0 0 0 0 7 8 1 0 0 0 0 0 0 0 0 0 0 0 0 (181) ALA276 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 0 0 14 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) ARG284 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence svpsqktyqgsygfrlgflhsgtaKSvTctyspalnkmfcQlaKtcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevcvcACpgRdrrReeenlrkk/svpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevcvcACpgRdrrReeenlr >4ibu_B:p53-like_transcription_factors; title=HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273C AND SECOND-SITE SUPPRESSOR MUTATION T284R IN SEQUENCE-SPECIFIC COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(E1):DG(F12) DG(E2):DC(F11) DG(E3):DC(F10) DG(E4):DC(F9) DC(E5):DG(F8) DA(E6):DT(F7) DT(E7):DA(F6) DG(E8):DC(F5) DC(E9):DG(F4) DC(E10):DG(F3) DC(E11):DG(F2) chainB ( 27) LYS120 0 0 0 0 0 0 0 0 4 9 5 (183) ALA276 0 0 0 0 0 0 0 1 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 3 0 0 (187) ARG280 0 0 0 0 0 0 14 10 4 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevcvcACpgRdrrreeenlrk >4ibv_A:p53-like_transcription_factors; title=HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273C AND SECOND-SITE SUPPRESSOR MUTATION S240R IN SEQUENCE-SPECIFIC COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(B1) DG(B2) DG(B3) DG(B4) DC(B5) DA(B6) DT(B7) DG(B8) DC(B9) DC(B10) DC(B11) chainA ( 27) LYS120 0 0 0 0 0 0 0 0 2 0 0 (180) ALA276 0 0 0 0 0 0 0 1 0 0 0 (181) CYS277 0 0 0 0 0 0 0 0 2 0 0 (184) ARG280 0 0 0 0 0 0 12 11 3 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnrscmggmnRrpiltiitledssgnllgrnsfevcvcACpgRdrrteeenlrkkg >4ibw_A:p53-like_transcription_factors; title=HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273H AND SECOND-SITE SUPPRESSOR MUTATION T284R IN SEQUENCE-SPECIFIC COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(B1) DG(B2) DG(B3) DG(B4) DC(B5) DA(B6) DT(B7) DG(B8) DC(B9) DC(B10) DC(B11) DG(B12) chainA ( 27) LYS120 0 0 0 0 0 0 0 0 2 0 0 0 (152) ARG248 0 0 0 0 0 7 0 0 0 0 0 0 (180) ALA276 0 0 0 0 0 0 0 1 1 0 0 0 (181) CYS277 0 0 0 0 0 0 0 0 3 0 0 0 (184) ARG280 0 0 0 0 0 0 12 11 3 0 0 0 (188) ARG284 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevhvcACpgRdrrReeenlrkkg >4iem_C:DNase_I-like; title=HUMAN APURINIC/APYRIMIDINIC ENDONUCLEASE (APE1) WITH PRODUCT DNA AND MG2+ organism=Homo sapiens DNA sequence DG(L507):DC(M516) DA(L508):DT(M515) DT(L509):DA(M514) DC(L510):DG(M513) DG(L511):DC(M512) chainC (137) ARG177 27 0 0 0 0 (189) ASN229 4 0 0 0 0 (230) MET270 6 0 0 0 0 (231) MET271 3 5 0 0 0 prot.sequence gpalyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetkcsenklpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtyMMnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >4ihs_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BENM_DBD/CATB SITE 1 DNA COMPLEX organism=Acinetobacter sp. DNA sequence DT(E1):DA(F25) DT(E2):DA(F24) DT(E3):DA(F23) DA(E4):DT(F22) DT(E5):DA(F21) DA(E6):DT(F20) DT(E7):DA(F19) DA(E8):DT(F18) DC(E9):DG(F17) DC(E10):DG(F16) DT(E11):DA(F15) DT(E12):DA(F14) DT(E13):DA(F13) DT(E14):DA(F12) DT(E15):DA(F11) DA(E16):DT(F10) DG(E17):DC(F9) DT(E18):DA(F8) DA(E19):DT(F7) DT(E20):DA(F6) DG(E21):DC(F5) DC(E22):DG(F4) DA(E23):DT(F3) DA(E24):DT(F2) DA(E25):DT(F1) chainA ( 28) ALA28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 ( 30) PRO30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 1 0 0 0 0 0 ( 31) PRO31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 4 1 0 0 0 0 0 0 ( 53) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 4 0 prot.sequence melrhlryfvavveeqsftkaadklciAQPPlsRqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkriasgh >4ihs_CD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BENM_DBD/CATB SITE 1 DNA COMPLEX organism=Acinetobacter sp. DNA sequence DT(G1):DA(H25) DT(G2):DA(H24) DT(G3):DA(H23) DA(G4):DT(H22) DT(G5):DA(H21) DA(G6):DT(H20) DT(G7):DA(H19) DA(G8):DT(H18) DC(G9):DG(H17) DC(G10):DG(H16) DT(G11):DA(H15) DT(G12):DA(H14) DT(G13):DA(H13) DT(G14):DA(H12) DT(G15):DA(H11) DA(G16):DT(H10) DG(G17):DC(H9) DT(G18):DA(H8) DA(G19):DT(H7) DT(G20):DA(H6) DG(G21):DC(H5) DC(G22):DG(H4) DA(G23):DT(H3) DA(G24):DT(H2) DA(G25):DT(H1) chainC ( 19) THR19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 28) ALA28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 ( 30) PRO30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 ( 31) PRO31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 4 0 0 0 0 0 0 0 ( 53) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 5 0 chainD ( 19) THR19 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ALA28 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) PRO30 0 0 0 0 0 1 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) PRO31 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER33 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 4 13 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG53 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence melrhlryfvavveeqsfTkaadklciAQPPlsRqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkriasghh/melrhlryfvavveeqsfTkaadklciAQPPlSRqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkriasgh >4iht_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BENM_DBD/BENA SITE 1 DNA COMPLEX organism=Acinetobacter sp. DNA sequence DA(F1):DT(E25) DT(F2):DA(E24) DA(F3):DT(E23) DA(F4):DT(E22) DA(F5):DT(E21) DA(F6):DT(E20) DT(F7):DA(E19) DA(F8):DT(E18) DC(F9):DG(E17) DC(F10):DG(E16) DT(F11):DA(E15) DA(F12):DT(E14) DT(F13):DA(E13) DG(F14):DC(E12) DG(F15):DC(E11) DA(F16):DT(E10) DG(F17):DC(E9) DT(F18):DA(E8) DA(F19):DT(E7) DT(F20):DA(E6) DT(F21):DA(E5) DT(F22):DA(E4) DT(F23):DA(E3) DT(F24):DA(E2) DA(F25):DT(E1) chainA ( 28) ALA28 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) PRO30 0 0 0 0 0 1 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) PRO31 0 0 0 0 0 0 0 2 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG53 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 28) ALA28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 ( 30) PRO30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 1 0 0 0 0 0 ( 31) PRO31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 10 1 0 0 0 0 0 0 0 ( 53) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 3 0 prot.sequence melrhlryfvavveeqsftkaadklciAQPPlsrqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkriasgh/melrhlryfvavveeqsftkaadklciAQPPlsRqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkriasghh >4iht_CD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BENM_DBD/BENA SITE 1 DNA COMPLEX organism=Acinetobacter sp. DNA sequence DT(G1):DA(H25) DA(G2):DT(H24) DA(G3):DT(H23) DA(G4):DT(H22) DA(G5):DT(H21) DA(G6):DT(H20) DT(G7):DA(H19) DA(G8):DT(H18) DC(G9):DG(H17) DT(G10):DA(H16) DC(G11):DG(H15) DC(G12):DG(H14) DA(G13):DT(H13) DT(G14):DA(H12) DA(G15):DT(H11) DG(G16):DC(H10) DG(G17):DC(H9) DT(G18):DA(H8) DA(G19):DT(H7) DT(G20):DA(H6) DT(G21):DA(H5) DT(G22):DA(H4) DT(G23):DA(H3) DA(G24):DT(H2) DT(G25):DA(H1) chainC ( 28) ALA28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 ( 30) PRO30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 1 0 0 0 0 0 ( 31) PRO31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 ( 33) SER33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 53) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 chainD ( 28) ALA28 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) PRO30 0 0 0 0 0 1 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) PRO31 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 0 11 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG53 0 4 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence melrhlryfvavveeqsftkaadklciAQPPlSrqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkria/melrhlryfvavveeqsftkaadklciAQPPlsRqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkriasghh >4iht_D:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BENM_DBD/BENA SITE 1 DNA COMPLEX organism=Acinetobacter sp. DNA sequence DT(G1):DA(H25) DA(G2):DT(H24) DA(G3):DT(H23) DA(G4):DT(H22) DA(G5):DT(H21) DA(G6):DT(H20) DT(G7):DA(H19) DA(G8):DT(H18) DC(G9):DG(H17) DT(G10):DA(H16) DC(G11):DG(H15) DC(G12):DG(H14) DA(G13):DT(H13) DT(G14):DA(H12) DA(G15):DT(H11) DG(G16):DC(H10) DG(G17):DC(H9) DT(G18):DA(H8) DA(G19):DT(H7) DT(G20):DA(H6) DT(G21):DA(H5) DT(G22):DA(H4) DT(G23):DA(H3) DA(G24):DT(H2) DT(G25):DA(H1) chainD ( 28) ALA28 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) PRO30 0 0 0 0 0 1 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) PRO31 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 0 11 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG53 0 4 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence melrhlryfvavveeqsftkaadklciAQPPlsRqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkriasghh >4ihv_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP SEQUENCE DNA F28 (AAATTTGTTTGAGCGTTGAGCAAATTT) organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DA(D11):DT(C17) DA(D12):DT(C16) DC(D13):DG(C15) DG(D14):DC(C14) DC(D15):DG(C13) DT(D16):DA(C12) DC(D17):DG(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 13 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 13 0 0 0 0 0 ( 87) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >4ihv_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP SEQUENCE DNA F28 (AAATTTGTTTGAGCGTTGAGCAAATTT) organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DA(C12):DT(D16) DG(C13):DC(D15) DC(C14):DG(D14) DG(C15):DC(D13) DT(C16):DA(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainB ( 75) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 13 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) THR87 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >4ihw_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP INOSINE SUBSTITUTED DNA F28- DI (AAATTTGTTTGAICITTGAGCAAATTT) organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DA(D11):DT(C17) DA(D12):DT(C16) DC(D13):DI(C15) DI(D14):DC(C14) DC(D15):DI(C13) DT(D16):DA(C12) DC(D17):DG(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 10 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS90 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRKklkkygmn >4ihw_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP INOSINE SUBSTITUTED DNA F28- DI (AAATTTGTTTGAICITTGAGCAAATTT) organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DA(C12):DT(D16) DI(C13):DC(D15) DC(C14):DI(D14) DI(C15):DC(D13) DT(C16):DA(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 68) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 10 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 83) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 11 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRKklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >4ihx_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP 2-AMINOPURINE SUBSTITUTED DNA F28-2AP (AAATTTGTTTGA2T2TTGAGCAAATTT) organism=Escherichia coli DNA sequence DA(C1):DT(D26) DA(C2):DT(D25) DA(C3):DA(D24) DT(C4):DA(D23) DT(C5):DA(D22) DT(C6):DC(D21) DG(C7):DA(D20) DT(C8):DA(D19) DT(C9):DA(D18) DT(C10):DC(D17) DG(C11):DT(D16) DA(C12):DT(D15) DT(C14):DT(D13) DT(C16):DA(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 68) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 13 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 11 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >4ihx_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP 2-AMINOPURINE SUBSTITUTED DNA F28-2AP (AAATTTGTTTGA2T2TTGAGCAAATTT) organism=Escherichia coli DNA sequence DA(C1):DT(D26) DA(C2):DT(D25) DA(C3):DA(D24) DT(C4):DA(D23) DT(C5):DA(D22) DT(C6):DC(D21) DG(C7):DA(D20) DT(C8):DA(D19) DT(C9):DA(D18) DT(C10):DC(D17) DG(C11):DT(D16) DA(C12):DT(D15) DT(C14):DT(D13) DT(C16):DA(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainB ( 75) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 11 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >4ihy_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP INOSINE SUBSTITUTED DNA F29-DI (AAATTTGTTTGIICICTGAGCAAATTT) organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DI(C12):DC(D16) DI(C13):DC(D15) DC(C14):DI(D14) DI(C15):DC(D13) DC(C16):DI(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 68) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 17 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 11 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >4ihy_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP INOSINE SUBSTITUTED DNA F29-DI (AAATTTGTTTGIICICTGAGCAAATTT) organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DI(C12):DC(D16) DI(C13):DC(D15) DC(C14):DI(D14) DI(C15):DC(D13) DC(C16):DI(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainB ( 75) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 11 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >4ikf_A:Ribonuclease_H-like; title=PFV INTASOME WITH INHIBITOR MB-76 organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 11 15 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >4iqj_A:PHP_domain-like;AF1531-like; title=STRUCTURE OF POLIIIALPHA-TAUC-DNA COMPLEX SUGGESTS AN ATOMIC MODEL OF THE REPLISOME organism=THERMUS AQUATICUS DNA sequence DT(F9):DA(E20) DG(F10):DC(E19) DG(F11):DC(E18) DC(F12):DG(E17) DA(F13):DT(E16) DC(F14):DG(E15) DT(F15):DA(E14) DG(F16):DC(E13) DG(F17):DC(E12) DC(F18):DG(E11) DC(F19):DG(E10) DG(F20):DC(E9) DT(F21):DA(E8) DC(F22):DG(E7) DG(F23):DC(E6) DT(F24):DA(E5) chainA (221) LYS233 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (483) VAL510 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (484) TYR511 10 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lkfahlhqhtqfslldgaaklqdllkwvkettpedpalamtdhgnlfgavefykkatamgvkpiigyeayvaaesrfdrgyfhltllakdftgyqnlvrlasraylegfyekpridreilrehaqglialsgclgaeipqfilqdrldlaearlnedlsifgdrffieiqnhglpeqkkvnqvlkefarkyglgmvatndghyvrkedarahevllaiqsKttlddperwrfpcdefyvktpeemramlpeaewgdepfdntveiarmcdvdlpigdkmvyriprfplpegrteaqylreltflgllrrypdriteafyrevlrllderalaealarveekaweelrkrewtaeailhralyelsviermgfpgyflivqdyinwarghgvsvgpgrgsaagslvayavgitnidplrfgllferflnpervsmpdidtdfsdrerdrviqyvrerygedkvaqigtfgslaskaalkdvarVYgiphkkaeelaklipkplqeaelraemekderirqvievamrleglnrhasvhaagvviaaepltdlvplmrdqegrpvtqydmgavealgllkmdflglrtltfldearrivkeskgveldydrlplddpktfellsrgetkgvfqlesggmtatvrglkprrlediialvslyrpgpmehiptyirrhhgqepvsyaefphaekylrpildetygipvyqeqimqiasqvagyslgeadllrramgkkrveemqkhrerfvrgakergvpeeeanrlfdmleafanygfnkshaaaysllsyqtayvkahypvefmaallsverhdsdkvaeyirdaralgipvlppdvnrsgfdfkvvgeeilfglsavknvgemaaraileererggpfkslgdflkrlpeqvvnkraleslvkagaldafgdrarllaslepllrwaaetrergrsglvglfaeveepplveaspldeitmlryekealgiyvsghpvlrypglrevasctieelsefvrelpgkpkvllsgmveevrftlsdetgalevvvfgrayegvspklkedipllvlaevervlaqavwtleevleapkalevevdhalldekgvarlkslldehpgslpvylrvlgpfgealfalrevrgeealglleaegyraylvpdrevflqgngggpkeevvpf >4iqr_AB:Nuclear_receptor_ligand-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MULTI-DOMAIN ORGANIZATION OF THE HNF4ALPHA NUCLEAR RECEPTOR COMPLEX ON DNA organism=Homo sapiens DNA sequence DC(D4001):DG(C3020) DT(D4002):DA(C3019) DG(D4003):DC(C3018) DA(D4004):DT(C3017) DC(D4005):DG(C3016) DC(D4006):DG(C3015) DT(D4007):DA(C3014) DT(D4008):DA(C3013) DT(D4009):DA(C3012) DG(D4010):DC(C3011) DA(D4011):DT(C3010) DC(D4012):DG(C3009) DC(D4013):DG(C3008) DT(D4014):DA(C3007) DA(D4015):DT(C3006) DG(D4016):DC(C3005) DT(D4017):DA(C3004) DT(D4018):DA(C3003) DC(D4019):DG(C3002) chainA ( 21) ASP69 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 ( 24) LYS72 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 ( 28) ARG76 0 0 0 0 0 0 0 0 0 0 2 9 5 0 0 0 0 0 0 ( 29) ARG77 0 0 0 0 0 0 0 0 12 6 0 0 0 0 0 0 0 0 0 chainB ( 21) ASP69 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS72 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG76 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG77 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG125 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alcaicgdratgkhygasscDgcKgffRRsvrknhmyscrfsrqcvvdkdkrnqcrycrlkkcfragmkkeavqneinallqaevlsrqitspvsgingdirakkiasiadvcesmkeqllvlvewakyipafcelplddqvallrahagehlllgatkrsmvfkdvlllgndyivprhcpelaemsrvsirildelvlpfqelqiddneyaylkaiiffdpdakglsdpgkikrlrsqvqvsledyindrqydsrgrfgelllllptlqsitwqmieqiqfiklfgmakidnllqemllgg/alcaicgdratgkhygasscDgcKgffRRsvrknhmyscrfsrqcvvdkdkrnqcrycrlkkcfragmkkeavqneRdristrrssyedsslpsinallqaevlsdirakkiasiadvcesmkeqllvlvewakyipafcelplddqvallrahagehlllgatkrsmvfkdvlllgndyivprhcpelaemsrvsirildelvlpfqelqiddneyaylkaiiffdpdakglsdpgkikrlrsqvqvsledyindrqydsrgrfgelllllptlqsitwqmieqiqfiklfgmakidnllqemllgg >4iqr_B:Nuclear_receptor_ligand-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MULTI-DOMAIN ORGANIZATION OF THE HNF4ALPHA NUCLEAR RECEPTOR COMPLEX ON DNA organism=Homo sapiens DNA sequence DG(C3002):DC(D4019) DA(C3003):DT(D4018) DA(C3004):DT(D4017) DC(C3005):DG(D4016) DT(C3006):DA(D4015) DA(C3007):DT(D4014) DG(C3008):DC(D4013) DG(C3009):DC(D4012) DT(C3010):DA(D4011) DC(C3011):DG(D4010) DA(C3012):DT(D4009) DA(C3013):DT(D4008) DA(C3014):DT(D4007) DG(C3015):DC(D4006) DG(C3016):DC(D4005) DT(C3017):DA(D4004) DC(C3018):DG(D4003) DA(C3019):DT(D4002) DG(C3020):DC(D4001) chainB ( 21) ASP69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 ( 24) LYS72 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 ( 28) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 ( 29) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 ( 77) ARG125 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 prot.sequence alcaicgdratgkhygasscDgcKgffRRsvrknhmyscrfsrqcvvdkdkrnqcrycrlkkcfragmkkeavqneRdristrrssyedsslpsinallqaevlsdirakkiasiadvcesmkeqllvlvewakyipafcelplddqvallrahagehlllgatkrsmvfkdvlllgndyivprhcpelaemsrvsirildelvlpfqelqiddneyaylkaiiffdpdakglsdpgkikrlrsqvqvsledyindrqydsrgrfgelllllptlqsitwqmieqiqfiklfgmakidnllqemllgg >4iqr_EF:Nuclear_receptor_ligand-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=MULTI-DOMAIN ORGANIZATION OF THE HNF4ALPHA NUCLEAR RECEPTOR COMPLEX ON DNA organism=Homo sapiens DNA sequence DG(G3002):DC(H4019) DA(G3003):DT(H4018) DA(G3004):DT(H4017) DC(G3005):DG(H4016) DT(G3006):DA(H4015) DA(G3007):DT(H4014) DG(G3008):DC(H4013) DG(G3009):DC(H4012) DT(G3010):DA(H4011) DC(G3011):DG(H4010) DA(G3012):DT(H4009) DA(G3013):DT(H4008) DA(G3014):DT(H4007) DG(G3015):DC(H4006) DG(G3016):DC(H4005) DT(G3017):DA(H4004) DC(G3018):DG(H4003) DA(G3019):DT(H4002) DG(G3020):DC(H4001) chainE ( 21) ASP69 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 ( 24) LYS72 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG76 0 0 0 0 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 ( 29) ARG77 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 chainF ( 21) ASP69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 ( 24) LYS72 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 ( 28) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 ( 29) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 ( 77) ARG125 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 prot.sequence alcaicgdratgkhygasscDgcKgffRRsvrknhmyscrfsrqcvvdkdkrnqcrycrlkkcfragmkkeavqnpsinallqaevlsrqitspvsgingdirakkiasiadvcesmkeqllvlvewakyipafcelplddqvallrahagehlllgatkrsmvfkdvlllgndyivprhcpelaemsrvsirildelvlpfqelqiddneyaylkaiiffdpdakglsdpgkikrlrsqvqvsledyindrqydsrgrfgelllllptlqsitwqmieqiqfiklfgmakidnllqemllgg/alcaicgdratgkhygasscDgcKgffRRsvrknhmyscrfsrqcvvdkdkrnqcrycrlkkcfragmkkeavqneRdristrrssyedsslpsinallqaevlsrsgingdirakkiasiadvcesmkeqllvlvewakyipafcelplddqvallrahagehlllgatkrsmvfkdvlllgndyivprhcpelaemsrvsirildelvlpfqelqiddneyaylkaiiffdpdakglsdpgkikrlrsqvqvsledyindrqydsrgrfgelllllptlqsitwqmieqiqfiklfgmakidnllqemllgg >4ir1_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POLYMERASE-DNA COMPLEX organism=Escherichia coli DNA sequence DG(H860):DC(G854) DG(H861):DC(G853) DG(H862):DC(G852) DT(H863):DA(G851) DC(H864):DG(G850) DC(H865):DG(G849) DT(H866):DA(G848) DA(H867):DT(G847) DG(H868):DC(G846) DG(H869):DC(G845) DA(H870):DT(G844) DC(H871):DG(G843) DC(H872):DG(G842) DC(H873):DG(G841) chainF (247) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (286) ARG285 0 0 0 0 0 0 8 0 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgvistanyparkfgvrsamptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >4ir9_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POLYMERASE-DNA COMPLEX organism=Escherichia coli DNA sequence DG(G841):DC(H873) DG(G842):DC(H872) DG(G843):DC(H871) DT(G844):DA(H870) DC(G845):DG(H869) DC(G846):DG(H868) DT(G847):DA(H867) DA(G848):DT(H866) DG(G849):DC(H865) DG(G850):DC(H864) DA(G851):DT(H863) DC(G852):DG(H862) DC(G853):DG(H861) DC(G854):DG(H860) chainF (247) GLU246 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgvistanyparkfgvrsamptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >4irc_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POLYMERASE-DNA COMPLEX organism=Escherichia coli DNA sequence DG(G841):DC(H873) DG(G842):DC(H872) DG(G843):DC(H871) DT(G844):DA(H870) DC(G845):DG(H869) DC(G846):DG(H868) DT(G847):DA(H867) DA(G848):DT(H866) DG(G849):DC(H865) DG(G850):DC(H864) DA(G851):DT(H863) DC(G852):DG(H862) DC(G853):DG(H861) DC(G854):DG(H860) chainF (247) GLU246 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 7 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgvistanyparkfgvrsamptgmalalcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqacdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >4ird_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF POLYMERASE-DNA COMPLEX organism=Escherichia coli DNA sequence DG(G841):DC(H873) DG(G842):DC(H872) DG(G843):DC(H871) DT(G844):DA(H870) DC(G845):DG(H869) DC(G846):DG(H868) DT(G847):DA(H867) DA(G848):DT(H866) DG(G849):DC(H865) DG(G850):DC(H864) DA(G851):DT(H863) DC(G852):DG(H862) DC(G853):DG(H861) DC(G854):DG(H860) chainF (247) GLU246 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgvistanyparkfgvrsamptgmalalcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqacdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >4iri_A:"Winged_helix"_DNA-binding_domain; title=AUTO-INHIBITED ERG ETS DOMAIN-DNA COMPLEX organism=Homo sapiens DNA sequence DG(B1):DC(C24) DA(B2):DT(C23) DC(B3):DG(C22) DC(B4):DG(C21) DG(B5):DC(C20) DG(B6):DC(C19) DA(B7):DT(C18) DA(B8):DT(C17) DG(B9):DC(C16) DT(B10):DA(C15) DG(B11):DC(C14) DG(B12):DC(C13) chainA ( 56) LYS347 0 0 0 0 0 0 3 0 0 0 0 0 ( 59) ARG350 0 0 0 0 25 18 9 1 0 0 0 0 ( 60) ALA351 0 0 0 0 0 0 0 1 0 0 0 0 ( 62) ARG353 0 0 0 17 11 0 0 0 0 0 0 0 ( 63) TYR354 0 0 0 0 0 0 6 7 7 0 0 0 prot.sequence gqiqlwqfllellsdssnsscitwegtngefkmtdpdevarrwgerkskpnmnydKlsRAlRYyydknimtkvhgkryaykfdfhgiaqalqph >4irk_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF POLYMERASE-DNA COMPLEX, DNA organism=Escherichia coli DNA sequence DG(H860):DC(F854) DG(H861):DC(F853) DG(H862):DC(F852) DT(H863):DA(F851) DC(H864):DG(F850) DC(H865):DG(F849) DT(H866):DA(F848) DA(H867):DT(F847) DG(H868):DC(F846) DG(H869):DC(F845) DA(H870):DT(F844) DC(H871):DG(F843) DC(H872):DG(F842) chainA (286) ARG285 0 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgvistanyparkfgvrsamptgmalalcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqacdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqtTqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >4is1_CD:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF ZNF217 BOUND TO DNA organism=Homo sapiens DNA sequence DT(A3):DA(B20) DG(A4):DC(B19) DC(A5):DG(B18) DA(A6):DT(B17) DG(A7):DC(B16) DA(A8):DT(B15) DA(A9):DT(B14) DT(A10):DA(B13) DC(A11):DG(B12) DG(A12):DC(B11) DA(A13):DT(B10) DT(A14):DA(B9) DT(A15):DA(B8) DC(A16):DG(B7) DT(A17):DA(B6) DG(A18):DC(B5) DC(A19):DG(B4) DA(A20):DT(B3) chainC ( 11) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 15 7 0 ( 12) SER482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 14) TYR484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 ( 15) TYR485 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 ( 40) GLN510 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 ( 42) THR512 0 0 0 0 0 0 0 0 0 0 0 1 7 12 3 0 0 0 ( 43) SER513 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 ( 45) ARG515 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 ( 46) TYR516 0 0 0 0 0 0 0 0 0 1 7 3 0 0 0 0 0 0 chainD ( 12) ARG481 0 6 12 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) SER482 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR484 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) TYR485 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN510 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR512 0 0 0 3 12 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) SER513 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG515 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR516 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 prot.sequence recsycgkffRSnYYlnihlrthtgekpykcefceyaaaQkTSlRYhlerhh/srecsycgkffRSnYYlnihlrthtgekpykcefceyaaaQkTSlRYhlerhhk >4is1_D:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF ZNF217 BOUND TO DNA organism=Homo sapiens DNA sequence DT(A3):DA(B20) DG(A4):DC(B19) DC(A5):DG(B18) DA(A6):DT(B17) DG(A7):DC(B16) DA(A8):DT(B15) DA(A9):DT(B14) DT(A10):DA(B13) DC(A11):DG(B12) DG(A12):DC(B11) DA(A13):DT(B10) DT(A14):DA(B9) DT(A15):DA(B8) DC(A16):DG(B7) DT(A17):DA(B6) DG(A18):DC(B5) DC(A19):DG(B4) DA(A20):DT(B3) chainD ( 12) ARG481 0 6 12 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) SER482 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR484 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) TYR485 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN510 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR512 0 0 0 3 12 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) SER513 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG515 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR516 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 prot.sequence srecsycgkffRSnYYlnihlrthtgekpykcefceyaaaQkTSlRYhlerhhk >4ivz_A:lambda_repressor-like_DNA-binding_domains; title=A Y37F MUTANT OF C.ESP1396I BOUND TO ITS HIGHEST AFFINITY OPERATOR SITE OM organism=Enterobacter sp. DNA sequence DT(G2):DA(H19) DG(G3):DC(H18) DT(G4):DA(H17) DA(G5):DT(H16) DG(G6):DC(H15) DA(G7):DT(H14) DC(G8):DG(H13) DT(G9):DA(H12) DA(G10):DT(H11) DT(G11):DA(H10) DA(G12):DT(H9) DG(G13):DC(H8) DT(G14):DA(H7) DC(G15):DG(H6) DG(G16):DC(H5) DA(G17):DT(H4) DC(G18):DG(H3) DA(G19):DT(H2) DA(C1):DT(H1) DT(C2):DA(D19) DG(C3):DC(D18) DT(C4):DA(D17) DA(C5):DT(D16) DG(C6):DC(D15) DA(C7):DT(D14) DC(C8):DG(D13) DT(C9):DA(D12) DA(C10):DT(D11) DT(C11):DA(D10) DA(C12):DT(D9) DG(C13):DC(D8) DT(C14):DA(D7) DC(C15):DG(D6) DG(C16):DC(D5) DA(C17):DT(D4) DC(C18):DG(D3) DA(C19):DT(D2) chainA ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) PHE37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtQedlayksnlDRTFiSgiernsRnltikslelimkglevsdvvffemlikeilk >4ivz_AF:lambda_repressor-like_DNA-binding_domains; title=A Y37F MUTANT OF C.ESP1396I BOUND TO ITS HIGHEST AFFINITY OPERATOR SITE OM organism=Enterobacter sp. DNA sequence DT(D2):DA(C19) DG(D3):DC(C18) DT(D4):DA(C17) DC(D5):DG(C16) DG(D6):DC(C15) DA(D7):DT(C14) DC(D8):DG(C13) DT(D9):DA(C12) DA(D10):DT(C11) DT(D11):DA(C10) DA(D12):DT(C9) DG(D13):DC(C8) DT(D14):DA(C7) DC(D15):DG(C6) DT(D16):DA(C5) DA(D17):DT(C4) DC(D18):DG(C3) DA(D19):DT(C2) DT(H1):DA(C1) DT(H2):DA(G19) DG(H3):DC(G18) DT(H4):DA(G17) DC(H5):DG(G16) DG(H6):DC(G15) DA(H7):DT(G14) DC(H8):DG(G13) DT(H9):DA(G12) DA(H10):DT(G11) DT(H11):DA(G10) DA(H12):DT(G9) DG(H13):DC(G8) DT(H14):DA(G7) DC(H15):DG(G6) DT(H16):DA(G5) DA(H17):DT(G4) DC(H18):DG(G3) DA(H19):DT(G2) chainA ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) PHE37 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 3 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 7 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) PHE37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 2 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtQedlayksnlDRTFiSgiernsRnltikslelimkglevsdvvffemlikeilk/esfllskvsfvikkirlekgmtqedlayksnlDRTFiSgiernsRnltikslelimkglevsdvvffemlikeilk >4iwr_A:lambda_repressor-like_DNA-binding_domains; title=C.ESP1396I BOUND TO A 25 BASE PAIR OPERATOR SITE organism=Enterobacter sp. DNA sequence DT(D1):DA(C25) DA(D2):DT(C24) DA(D3):DT(C23) DT(D4):DA(C22) DC(D5):DG(C21) DA(D6):DT(C20) DC(D7):DG(C19) DA(D8):DT(C18) DC(D9):DG(C17) DG(D10):DC(C16) DG(D11):DC(C15) DA(D12):DT(C14) DC(D13):DG(C13) DT(D14):DA(C12) DA(D15):DT(C11) DT(D16):DA(C10) DA(D17):DT(C9) DA(D18):DT(C8) DG(D19):DC(C7) DT(D20):DA(C6) DC(D21):DG(C5) DA(D22):DT(C4) DC(D23):DG(C3) DA(D24):DT(C2) DT(D25):DA(C1) chainA ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 29 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 5 1 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 5 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtQEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeil >4iwr_AB:lambda_repressor-like_DNA-binding_domains; title=C.ESP1396I BOUND TO A 25 BASE PAIR OPERATOR SITE organism=Enterobacter sp. DNA sequence DT(D1):DA(C25) DA(D2):DT(C24) DA(D3):DT(C23) DT(D4):DA(C22) DC(D5):DG(C21) DA(D6):DT(C20) DC(D7):DG(C19) DA(D8):DT(C18) DC(D9):DG(C17) DG(D10):DC(C16) DG(D11):DC(C15) DA(D12):DT(C14) DC(D13):DG(C13) DT(D14):DA(C12) DA(D15):DT(C11) DT(D16):DA(C10) DA(D17):DT(C9) DA(D18):DT(C8) DG(D19):DC(C7) DT(D20):DA(C6) DC(D21):DG(C5) DA(D22):DT(C4) DC(D23):DG(C3) DA(D24):DT(C2) DT(D25):DA(C1) chainA ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 29 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 5 1 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 5 0 0 0 0 0 chainB ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 3 3 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtQEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeil/esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk >4iwr_EF:lambda_repressor-like_DNA-binding_domains; title=C.ESP1396I BOUND TO A 25 BASE PAIR OPERATOR SITE organism=Enterobacter sp. DNA sequence DA(G1):DT(H25) DT(G2):DA(H24) DG(G3):DC(H23) DT(G4):DA(H22) DG(G5):DC(H21) DA(G6):DT(H20) DC(G7):DG(H19) DT(G8):DA(H18) DT(G9):DA(H17) DA(G10):DT(H16) DT(G11):DA(H15) DA(G12):DT(H14) DG(G13):DC(H13) DT(G14):DA(H12) DC(G15):DG(H11) DC(G16):DG(H10) DG(G17):DC(H9) DT(G18):DA(H8) DG(G19):DC(H7) DT(G20):DA(H6) DG(G21):DC(H5) DA(G22):DT(H4) DT(G23):DA(H3) DT(G24):DA(H2) chainE ( 24) GLU25 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 29 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 1 4 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 5 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 3 3 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeil/esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk >4ix7_AB: title=CRYSTAL STRUCTURE OF THE INSV-BEN DOMAIN COMPLEXED TO ITS DNA TARGET SITE organism=DROSOPHILA MELANOGASTER DNA sequence DT(C2):DA(D13) DT(C3):DA(D12) DC(C4):DG(D11) DC(C5):DG(D10) DA(C6):DT(D9) DA(C7):DT(D8) DT(C8):DA(D7) DT(C9):DA(D6) DG(C10):DC(D5) DG(C11):DC(D4) DA(C12):DT(D3) DA(C13):DT(D2) chainA ( 32) ARG282 0 0 0 0 0 0 0 0 0 2 1 0 ( 54) SER304 0 0 0 0 0 7 0 0 0 0 0 0 ( 55) PRO305 0 0 0 9 8 0 0 0 0 0 0 0 ( 56) ALA306 0 0 0 0 3 3 0 0 0 0 0 0 ( 57) PHE307 0 0 0 0 0 0 4 0 0 0 0 0 ( 96) THR346 0 0 0 0 0 1 1 0 0 0 0 0 ( 97) THR347 0 0 0 0 0 0 0 0 0 2 0 0 (100) ALA350 0 0 0 0 0 0 0 1 0 0 0 0 (101) ASP351 0 0 0 0 0 0 0 0 0 9 9 0 (104) LYS354 0 0 0 0 0 0 0 4 9 5 0 0 (105) MET355 0 0 0 0 0 0 0 0 0 0 0 1 chainB ( 32) ARG282 0 1 2 0 0 0 0 0 0 0 0 0 ( 54) SER304 0 0 0 0 0 0 7 0 0 0 0 0 ( 55) PRO305 0 0 0 0 0 0 0 7 8 0 0 0 ( 56) ALA306 0 0 0 0 0 0 3 3 0 0 0 0 ( 57) PHE307 0 0 0 0 0 4 0 0 0 0 0 0 ( 96) THR346 0 0 0 0 0 1 2 0 0 0 0 0 ( 97) THR347 0 0 3 0 0 0 0 0 0 0 0 0 (100) ALA350 0 0 0 0 1 0 0 0 0 0 0 0 (101) ASP351 0 9 9 0 0 0 0 0 0 0 0 0 (104) LYS354 0 0 5 10 5 0 0 0 0 0 0 0 (105) MET355 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dnvmvsigpnntcvpasvfeninwsvcslatRkllvtifdretlathsvtgkpSPAFkdqdkplkrmldpgkiqdiifavthkcnasekevrnaiTTkcADenKMmkiqnvkrr/dnvmvsigpnntcvpasvfeninwsvcslatRkllvtifdretlathsvtgkpSPAFkdqdkplkrmldpgkiqdiifavthkcnasekevrNaiTTkcADenKMmkiqnvkrr >4ix7_B: title=CRYSTAL STRUCTURE OF THE INSV-BEN DOMAIN COMPLEXED TO ITS DNA TARGET SITE organism=DROSOPHILA MELANOGASTER DNA sequence DT(D2):DA(C13) DT(D3):DA(C12) DC(D4):DG(C11) DC(D5):DG(C10) DA(D6):DT(C9) DA(D7):DT(C8) DT(D8):DA(C7) DT(D9):DA(C6) DG(D10):DC(C5) DG(D11):DC(C4) DA(D12):DT(C3) DA(D13):DT(C2) chainB ( 32) ARG282 0 0 0 0 0 0 0 0 0 2 1 0 ( 54) SER304 0 0 0 0 0 7 0 0 0 0 0 0 ( 55) PRO305 0 0 0 8 7 0 0 0 0 0 0 0 ( 56) ALA306 0 0 0 0 3 3 0 0 0 0 0 0 ( 57) PHE307 0 0 0 0 0 0 4 0 0 0 0 0 ( 96) THR346 0 0 0 0 0 2 1 0 0 0 0 0 ( 97) THR347 0 0 0 0 0 0 0 0 0 3 0 0 (100) ALA350 0 0 0 0 0 0 0 1 0 0 0 0 (101) ASP351 0 0 0 0 0 0 0 0 0 9 9 0 (104) LYS354 0 0 0 0 0 0 0 5 10 5 0 0 (105) MET355 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence dnvmvsigpnntcvpasvfeninwsvcslatRkllvtifdretlathsvtgkpSPAFkdqdkplkrmldpgkiqdiifavthkcnasekevrNaiTTkcADenKMmkiqnvkrr >4izz_A: title=CRYSTAL STRUCTURE OF FISCHERELLA TRANSCRIPTION FACTOR HETR COMPLEXED WITH 21MER DNA TARGET organism=FISCHERELLA THERMALIS DNA sequence DG(D-10):DC(C10) DT(D-9):DA(C9) DG(D-8):DC(C8) DA(D-7):DT(C7) DG(D-6):DC(C6) DG(D-5):DC(C5) DG(D-4):DC(C4) DG(D-3):DC(C3) DT(D-2):DA(C2) DT(D-1):DA(C1) DA(D0):DA(C0) DA(D1):DT(C-1) DA(D2):DT(C-2) DC(D3):DG(C-3) DC(D4):DG(C-4) DC(D5):DG(C-5) DC(D6):DG(C-6) DT(D7):DA(C-7) DC(D8):DG(C-8) DA(D9):DT(C-9) DC(D10):DG(C-10) chainA ( 58) ARG62 0 20 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) GLU71 0 0 0 0 0 5 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) LYS73 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vdlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkaiveevrqaltegkllkmlgsqepryliqfpyvwmekypwrpgrsripgtsltseekrqieqklpsnlpdahlitsfeflelieflhkrsqedlpkehqmplsealaehikrrllysgtvtridspwgmpfyaltrpfyapaddqertyimvedtarffrmmrdwaekrpntmrvleeldilpekmqqakdeldeiirawadkyhqddgvpvvlqmvfgkke >4izz_AB: title=CRYSTAL STRUCTURE OF FISCHERELLA TRANSCRIPTION FACTOR HETR COMPLEXED WITH 21MER DNA TARGET organism=FISCHERELLA THERMALIS DNA sequence DG(D-10):DC(C10) DT(D-9):DA(C9) DG(D-8):DC(C8) DA(D-7):DT(C7) DG(D-6):DC(C6) DG(D-5):DC(C5) DG(D-4):DC(C4) DG(D-3):DC(C3) DT(D-2):DA(C2) DT(D-1):DA(C1) DA(D0):DA(C0) DA(D1):DT(C-1) DA(D2):DT(C-2) DC(D3):DG(C-3) DC(D4):DG(C-4) DC(D5):DG(C-5) DC(D6):DG(C-6) DT(D7):DA(C-7) DC(D8):DG(C-8) DA(D9):DT(C-9) DC(D10):DG(C-10) chainA ( 58) ARG62 0 20 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) GLU71 0 0 0 0 0 5 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) LYS73 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 58) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 ( 67) GLU71 0 0 0 0 0 0 0 0 0 0 0 0 1 9 6 0 0 0 0 0 0 ( 69) LYS73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 3 0 0 0 prot.sequence vdlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkaiveevrqaltegkllkmlgsqepryliqfpyvwmekypwrpgrsripgtsltseekrqieqklpsnlpdahlitsfeflelieflhkrsqedlpkehqmplsealaehikrrllysgtvtridspwgmpfyaltrpfyapaddqertyimvedtarffrmmrdwaekrpntmrvleeldilpekmqqakdeldeiirawadkyhqddgvpvvlqmvfgkke/vdlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkaiveevrqaltegkllkmlgsqepryliqfpyvwmekypwrpgrsripgtsltseekrqieqklpsnlpdahlitsfeflelieflhkrsqedlpkehqmplsealaehikrrllysgtvtridspwgmpfyaltrpfyapaddqertyimvedtarffrmmrdwaekrpntmrvleeldilpekmqqakdeldeiirawadkyhqddgvpvvlqmvfgkke >4j00_AB: title=CRYSTAL STRUCTURE OF FISCHERELLA TRANSCRIPTION FACTOR HETR COMPLEXED WITH 24MER DNA TARGET organism=FISCHERELLA THERMALIS DNA sequence DG(D2):DC(C24) DG(D3):DC(C23) DT(D4):DA(C22) DG(D5):DC(C21) DG(D7):DC(C19) DG(D8):DC(C18) DG(D9):DC(C17) DG(D10):DC(C16) DT(D11):DA(C15) DT(D12):DA(C14) DA(D13):DA(C13) DA(D14):DT(C12) DA(D15):DT(C11) DC(D16):DG(C10) DC(D17):DG(C9) DC(D18):DG(C8) DC(D19):DG(C7) DT(D20):DA(C6) DC(D21):DG(C5) DA(D22):DT(C4) DC(D23):DG(C3) DC(D24):DG(C2) chainA ( 61) ARG62 0 0 13 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) GLU71 0 0 0 0 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LYS73 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 61) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 8 0 0 0 ( 70) GLU71 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 ( 72) LYS73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 prot.sequence sndvdlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkaiveevrqaltegkllkmlgsqepryliqfpyvwmekypwrpgrsripgtsltseekrqieqklpsnlpdahlitsfeflelieflhkrsqedlpkehqmplsealaehikrrllysgtvtridspwgmpfyaltrpfyapaddqertyimvedtarffrmmrdwaekrpntmrvleeldilpekmqqakdeldeiirawadkyhqddgvpvvlqmvfgkke/sndvdlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkaiveevrqaltegkllkmlgsqepryliqfpyvwmekypwrpgrsripgtsltseekrqieqklpsnlpdahlitsfeflelieflhkrsqedlpkehqmplsealaehikrrllysgtvtridspwgmpfyaltrpfyapaddqertyimvedtarffrmmrdwaekrpntmrvleeldilpekmqqakdeldeiirawadkyhqddgvpvvlqmvfgkke >4j00_B: title=CRYSTAL STRUCTURE OF FISCHERELLA TRANSCRIPTION FACTOR HETR COMPLEXED WITH 24MER DNA TARGET organism=FISCHERELLA THERMALIS DNA sequence DG(D2):DC(C24) DG(D3):DC(C23) DT(D4):DA(C22) DG(D5):DC(C21) DG(D7):DC(C19) DG(D8):DC(C18) DG(D9):DC(C17) DG(D10):DC(C16) DT(D11):DA(C15) DT(D12):DA(C14) DA(D13):DA(C13) DA(D14):DT(C12) DA(D15):DT(C11) DC(D16):DG(C10) DC(D17):DG(C9) DC(D18):DG(C8) DC(D19):DG(C7) DT(D20):DA(C6) DC(D21):DG(C5) DA(D22):DT(C4) DC(D23):DG(C3) DC(D24):DG(C2) chainB ( 61) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 8 0 0 0 ( 70) GLU71 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 ( 72) LYS73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 prot.sequence sndvdlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkaiveevrqaltegkllkmlgsqepryliqfpyvwmekypwrpgrsripgtsltseekrqieqklpsnlpdahlitsfeflelieflhkrsqedlpkehqmplsealaehikrrllysgtvtridspwgmpfyaltrpfyapaddqertyimvedtarffrmmrdwaekrpntmrvleeldilpekmqqakdeldeiirawadkyhqddgvpvvlqmvfgkke >4j01_AB: title=CRYSTAL STRUCTURE OF FISCHERELLA TRANSCRIPTION FACTOR HETR COMPLEXED WITH 29MER DNA TARGET organism=FISCHERELLA THERMALIS DNA sequence DG(D1):DC(C29) DC(D2):DG(C28) DA(D3):DT(C27) DG(D4):DC(C26) DG(D5):DC(C25) DC(D6):DG(C24) DG(D7):DC(C23) DA(D8):DT(C22) DG(D9):DC(C21) DG(D10):DC(C20) DG(D11):DC(C19) DG(D12):DC(C18) DT(D13):DA(C17) DC(D14):DG(C16) DT(D15):DT(C15) DG(D16):DC(C14) DA(D17):DT(C13) DC(D18):DG(C12) DC(D20):DG(C10) DC(D21):DG(C9) DT(D22):DA(C8) DC(D23):DG(C7) DG(D24):DC(C6) DC(D25):DG(C5) DC(D26):DG(C4) DT(D27):DA(C3) DG(D28):DC(C2) DC(D29):DG(C1) chainA ( 57) LEU61 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG62 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) GLU71 0 0 0 0 0 0 0 0 0 5 12 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) LYS73 0 0 0 0 0 0 0 0 0 8 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 58) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 ( 67) GLU71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 ( 69) LYS73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 1 0 0 0 0 0 0 0 prot.sequence vdlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnLRmtghlhhlEpKrvkaiveevrqaltegkllkmlgsqepryliqfpyvwmekypwrpgrsripgtsltseekrqieqklpsnlpdahlitsfeflelieflhkrsqedlpkehqmplsealaehikrrllysgtvtridspwgmpfyaltrpfyapaddqertyimvedtarffrmmrdwaekrpntmrvleeldilpekmqqakdeldeiirawadkyhqddgvpvvlqmvfgkke/vdlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkaiveevrqaltegkllkmlgsqepryliqfpyvwmekypwrpgrsripgtsltseekrqieqklpsnlpdahlitsfeflelieflhkrsqedlpkehqmplsealaehikrrllysgtvtridspwgmpfyaltrpfyapaddqertyimvedtarffrmmrdwaekrpntmrvleeldilpekmqqakdeldeiirawadkyhqddgvpvvlqmvfgkke >4j01_E: title=CRYSTAL STRUCTURE OF FISCHERELLA TRANSCRIPTION FACTOR HETR COMPLEXED WITH 29MER DNA TARGET organism=FISCHERELLA THERMALIS DNA sequence DG(H1):DC(G29) DC(H2):DG(G28) DA(H3):DT(G27) DG(H4):DC(G26) DG(H5):DC(G25) DC(H6):DG(G24) DG(H7):DC(G23) DA(H8):DT(G22) DG(H9):DC(G21) DG(H10):DC(G20) DG(H11):DC(G19) DT(H13):DA(G17) DC(H14):DG(G16) DT(H15):DT(G15) DG(H16):DC(G14) DA(H17):DT(G13) DC(H18):DG(G12) DC(H19):DG(G11) DC(H20):DG(G10) DC(H21):DG(G9) DT(H22):DA(G8) DC(H23):DG(G7) DG(H24):DC(G6) DC(H25):DG(G5) DC(H26):DG(G4) DG(H28):DC(G2) DC(H29):DG(G1) chainE ( 58) ARG62 0 0 0 0 0 25 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) GLU71 0 0 0 0 0 0 0 0 1 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) LYS73 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vdlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkaiveevrqaltegkllkmlgsqepryliqfpyvwmekypwrpgrsripgtsltseekrqieqklpsnlpdahlitsfeflelieflhkrsqedlpkehqmplsealaehikrrllysgtvtridspwgmpfyaltrpfyapaddqertyimvedtarffrmmrdwaekrpntmrvleeldilpekmqqakdeldeiirawadkyhqddgvpvvlqmvfgkke >4j01_EF: title=CRYSTAL STRUCTURE OF FISCHERELLA TRANSCRIPTION FACTOR HETR COMPLEXED WITH 29MER DNA TARGET organism=FISCHERELLA THERMALIS DNA sequence DG(G1):DC(H29) DC(G2):DG(H28) DG(G4):DC(H26) DG(G5):DC(H25) DC(G6):DG(H24) DG(G7):DC(H23) DA(G8):DT(H22) DG(G9):DC(H21) DG(G10):DC(H20) DG(G11):DC(H19) DG(G12):DC(H18) DT(G13):DA(H17) DC(G14):DG(H16) DT(G15):DT(H15) DG(G16):DC(H14) DA(G17):DT(H13) DC(G19):DG(H11) DC(G20):DG(H10) DC(G21):DG(H9) DT(G22):DA(H8) DC(G23):DG(H7) DG(G24):DC(H6) DC(G25):DG(H5) DC(G26):DG(H4) DT(G27):DA(H3) DG(G28):DC(H2) DC(G29):DG(H1) chainE ( 58) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 25 0 0 0 0 0 ( 67) GLU71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 1 0 0 0 0 0 0 0 0 ( 69) LYS73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 chainF ( 58) ARG62 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) GLU71 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) LYS73 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vdlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkaiveevrqaltegkllkmlgsqepryliqfpyvwmekypwrpgrsripgtsltseekrqieqklpsnlpdahlitsfeflelieflhkrsqedlpkehqmplsealaehikrrllysgtvtridspwgmpfyaltrpfyapaddqertyimvedtarffrmmrdwaekrpntmrvleeldilpekmqqakdeldeiirawadkyhqddgvpvvlqmvfgkke/vdlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkaiveevrqaltegkllkmlgsqepryliqfpyvwmekypwrpgrsripgtsltseekrqieqklpsnlpdahlitsfeflelieflhkrsqedlpkehqmplsealaehikrrllysgtvtridspwgmpfyaltrpfyapaddqertyimvedtarffrmmrdwaekrpntmrvleeldilpekmqqakdeldeiirawadkyhqddgvpvvlqmvfgkke >4j19_AB:Homeodomain-like; title=STRUCTURE OF A NOVEL TELOMERE REPEAT BINDING PROTEIN BOUND TO DNA organism=Homo sapiens DNA sequence DC(D2):DG(C19) DT(D3):DA(C18) DA(D4):DT(C17) DA(D5):DT(C16) DC(D6):DG(C15) DC(D7):DG(C14) DC(D8):DG(C13) DT(D9):DA(C12) DA(D10):DT(C11) DA(D11):DT(C10) DC(D12):DG(C9) DC(D13):DG(C8) DC(D14):DG(C7) DT(D15):DA(C6) DA(D16):DT(C5) DA(D17):DT(C4) DC(D18):DG(C3) DA(D19):DT(C2) chainA ( 3) ARG271 11 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) TYR327 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 60) ASN328 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ASN332 0 0 6 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS335 0 0 0 0 5 16 5 0 0 0 0 0 0 0 0 0 0 0 chainB ( 1) ARG267 0 0 0 0 0 0 0 0 3 6 5 0 0 0 0 0 0 0 ( 5) ARG271 0 0 0 0 0 0 18 7 10 0 0 0 0 0 0 0 0 0 ( 61) TYR327 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 62) ASN328 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 ( 66) ASN332 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 ( 69) LYS335 0 0 0 0 0 0 0 0 0 0 5 12 5 0 0 0 0 0 prot.sequence gsRftwrkeclavmesyfnenqypdeakreeianacnaviqkpgkklsdlervtslkvYNwfaNrrKeikrraniea/RrgsRftwrkeclavmesyfnenqypdeakreeianacnaviqkpgkklsdlervtslkvYNwfaNrrKeikrran >4j19_B:Homeodomain-like; title=STRUCTURE OF A NOVEL TELOMERE REPEAT BINDING PROTEIN BOUND TO DNA organism=Homo sapiens DNA sequence DC(D2):DG(C19) DT(D3):DA(C18) DA(D4):DT(C17) DA(D5):DT(C16) DC(D6):DG(C15) DC(D7):DG(C14) DC(D8):DG(C13) DT(D9):DA(C12) DA(D10):DT(C11) DA(D11):DT(C10) DC(D12):DG(C9) DC(D13):DG(C8) DC(D14):DG(C7) DT(D15):DA(C6) DA(D16):DT(C5) DA(D17):DT(C4) DC(D18):DG(C3) DA(D19):DT(C2) chainB ( 1) ARG267 0 0 0 0 0 0 0 0 3 6 5 0 0 0 0 0 0 0 ( 5) ARG271 0 0 0 0 0 0 18 7 10 0 0 0 0 0 0 0 0 0 ( 61) TYR327 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 62) ASN328 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 ( 66) ASN332 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 ( 69) LYS335 0 0 0 0 0 0 0 0 0 0 5 12 5 0 0 0 0 0 prot.sequence RrgsRftwrkeclavmesyfnenqypdeakreeianacnaviqkpgkklsdlervtslkvYNwfaNrrKeikrran >4j2a_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE L415A TERNARY COMPLEX organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DC(P115):DG(T5) TTP(A1001):DA(T4) chainA (361) PRO361 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (411) ASP411 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (413) THR413 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (414) SER414 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (415) ALA415 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (482) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (486) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (560) LYS560 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (561) LEU561 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (564) ASN564 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (565) SER565 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (567) TYR567 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (623) ASP623 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkLlinSlYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4j2b_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE L415G TERNARY COMPLEX organism=Enterobacteria phage RB69 DNA sequence DT(T4):ATP(A1001) DA(T5):DT(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (279) LYS279 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) PRO361 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ASP411 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) THR413 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) SER414 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) ARG482 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) LYS486 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (560) LYS560 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (561) LEU561 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (564) ASN564 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (565) SER565 13 0 0 0 0 0 0 0 0 0 0 0 0 0 (567) TYR567 4 1 0 0 0 0 0 0 0 0 0 0 0 0 (623) ASP623 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 0 7 6 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsgypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkLlinSlYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4j2d_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE L415K TERNARY COMPLEX organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DT(P115):DG(T5) TTP(A1001):DA(T4) chainA (361) PRO361 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (411) ASP411 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (413) THR413 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (414) SER414 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (415) LYS415 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (482) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (486) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (560) LYS560 0 0 0 0 0 0 0 0 0 0 0 0 0 17 (561) LEU561 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (564) ASN564 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (565) SER565 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (567) TYR567 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (623) ASP623 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (706) LYS706 0 0 0 0 0 0 0 0 0 0 6 7 0 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltskypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkLlinSlYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4j2e_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE L415M TERNARY COMPLEX organism=Enterobacteria phage RB69 DNA sequence DT(T4):ATP(A1001) DC(T5):DG(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (279) LYS279 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) PRO361 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ASP411 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) THR413 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) SER414 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) MET415 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) ARG482 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) LYS486 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (560) LYS560 13 0 0 0 0 0 0 0 0 0 0 0 0 0 (561) LEU561 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (564) ASN564 19 0 0 0 0 0 0 0 0 0 0 0 0 0 (565) SER565 13 0 0 0 0 0 0 0 0 0 0 0 0 0 (567) TYR567 4 2 0 0 0 0 0 0 0 0 0 0 0 0 (623) ASP623 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 0 7 6 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsmypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkLlinSlYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4j2x_A:DNA-binding_protein_LAG-1_CSL;p53-like_transcription_factors;E_set_domains; title=CSL (RBP-JK) WITH COREPRESSOR KYOT2 BOUND TO DNA organism=MUS MUSCULUS DNA sequence DT(G3):DA(H15) DC(G4):DG(H14) DT(G5):DA(H13) DT(G6):DA(H12) DT(G7):DA(H11) DC(G8):DG(H10) DC(G9):DG(H9) DC(G10):DG(H8) DA(G11):DT(H7) DC(G12):DG(H6) DA(G13):DT(H5) DG(G14):DC(H4) DT(G15):DA(H3) chainA ( 34) TYR86 0 0 0 10 4 0 0 0 0 0 0 0 0 ( 37) GLU89 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 39) ARG91 0 0 0 0 0 2 14 9 0 0 0 0 0 (139) SER191 0 0 3 1 0 0 0 0 0 0 0 0 0 (140) LYS192 0 0 3 5 5 1 0 0 0 0 0 0 0 (169) SER221 0 0 0 0 0 0 0 1 0 0 0 0 0 (170) GLN222 0 0 0 0 0 0 0 0 2 5 1 0 0 prot.sequence ppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmetdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskkkqslknadlciasgtkvalfnrlrSQtvstrylhveggnfhassqqwgafyihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkeqnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlngggdvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgviystsltftytp >4j3n_A:Type_II_DNA_topoisomerase; title=HUMAN TOPOISOMERASE IIBETA IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(F13):DC(C8) DC(F14):DG(C7) DT(F15):DA(C6) DC(F16):DG(C5) DG(F17):DC(C4) DG(F18):DC(C3) DC(F19):DG(C2) DT(F20):DA(C1) chainA ( 49) ARG503 39 0 0 0 0 0 0 0 ( 51) LYS505 3 5 0 0 0 0 0 0 (266) GLN778 3 0 0 0 0 0 0 0 (267) ALA779 0 2 0 0 0 0 0 0 (360) ILE872 0 0 0 14 22 0 0 0 (365) ALA877 0 0 0 0 1 0 0 0 prot.sequence pklddandaggkhslectliltegdsakslavsglgvigrdrygvfplRgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitakeyfadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlhglkhltyndfinkelilfsnsDneRSipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeQAlmMtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspryiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaegIgtgwAcklpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngtdktpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqegpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >4j8u_A:Histone-fold; title=X-RAY STRUCTURE OF NCP145 WITH CHLORIDO(ETA-6-P-CYMENE)(N-PHENYL-2- PYRIDINECARBOTHIOAMIDE)OSMIUM(II) organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >4j8u_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=X-RAY STRUCTURE OF NCP145 WITH CHLORIDO(ETA-6-P-CYMENE)(N-PHENYL-2- PYRIDINECARBOTHIOAMIDE)OSMIUM(II) organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4j8v_A:Histone-fold; title=X-RAY STRUCTURE OF NCP145 WITH BOUND CHLORIDO(ETA-6-P-CYMENE)(N- PHENYL-2-PYRIDINECARBOTHIOAMIDE)RUTHENIUM(II) organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >4j8v_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=X-RAY STRUCTURE OF NCP145 WITH BOUND CHLORIDO(ETA-6-P-CYMENE)(N- PHENYL-2-PYRIDINECARBOTHIOAMIDE)RUTHENIUM(II) organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgiSskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4j8w_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=X-RAY STRUCTURE OF NCP145 WITH CHLORIDO(ETA-6-P-CYMENE)(N- FLUOROPHENYL-2-PYRIDINECARBOTHIOAMIDE)OSMIUM(II) organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgiSskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4j8w_H:Histone-fold; title=X-RAY STRUCTURE OF NCP145 WITH CHLORIDO(ETA-6-P-CYMENE)(N- FLUOROPHENYL-2-PYRIDINECARBOTHIOAMIDE)OSMIUM(II) organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4j8x_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=X-RAY STRUCTURE OF NCP145 WITH BOUND CHLORIDO(ETA-6-P-CYMENE)(N- FLUOROPHENYL-2-PYRIDINECARBOTHIOAMIDE)RUTHENIUM(II) organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstelliRkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgiSskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4j9k_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: MISINCORPORATION G OPPOSITE T AFTER A T AT THE PRIMER 3' END (TA/G) organism=Homo sapiens DNA sequence DA(P2):DT(T13) DG(P3):DC(T12) DC(P4):DG(T11) DG(P5):DC(T10) DT(P6):DA(T9) DC(P7):DG(T8) DA(P8):DT(T7) DT(P9):DA(T6) chainA ( 64) ARG61 0 0 0 0 0 0 0 21 (320) SER322 0 0 0 0 0 0 4 1 (376) LEU378 0 0 0 0 0 2 6 0 (380) ARG382 0 0 20 11 0 0 0 0 (419) MET421 0 0 0 0 0 0 1 0 (421) PHE423 0 0 0 0 0 0 5 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltMlFlcatkfsas >4j9l_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: MISINCORPORATION G OPPOSITE T AFTER A C AT THE PRIMER 3' END (CA/G) organism=Homo sapiens DNA sequence DA(P2):DT(T12) DC(P3):DG(T11) DG(P4):DC(T10) DT(P5):DA(T9) DC(P6):DG(T8) DA(P7):DT(T7) DT(P8):DA(T6) DC(P9):DG(T5) chainA ( 64) ARG61 0 0 0 0 0 0 0 17 (377) SER379 0 0 0 1 0 0 0 0 (380) ARG382 0 7 12 2 0 0 0 0 (421) PHE423 0 0 0 0 0 2 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcskNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlSslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >4j9m_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: MISINCORPORATION G OPPOSITE T AFTER AN A AT THE PRIMER 3' END (AA/G) organism=Homo sapiens DNA sequence DA(P2):DT(T12) DC(P3):DG(T11) DG(P4):DC(T10) DT(P5):DA(T9) DC(P6):DG(T8) DA(P7):DT(T7) DT(P8):DA(T6) DA(P9):DT(T5) chainA ( 64) ARG61 0 0 0 0 0 0 0 18 (319) SER322 0 0 0 0 0 0 0 1 (321) ASN324 0 0 0 0 0 0 0 3 (376) SER379 0 0 0 1 0 0 0 0 (379) ARG382 0 0 2 5 0 0 0 0 (420) PHE423 0 0 0 0 0 3 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgtvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlSslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >4j9n_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: MISINCORPORATION G OPPOSITE T AFTER A G AT THE PRIMER 3' END (GA/G) organism=Homo sapiens DNA sequence DC(T5):DG(P9) DT(T6):DA(P8) DG(T7):DC(P7) DA(T8):DT(P6) DC(T9):DG(P5) DG(T10):DC(P4) DC(T11):DG(P3) DT(T12):DA(P2) chainA ( 64) ARG61 17 0 0 0 0 0 0 0 (320) SER322 0 1 0 0 0 0 0 0 (376) LEU378 0 3 2 0 0 0 0 0 (380) ARG382 0 0 0 0 0 3 9 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4j9o_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: PRIMER EXTENSION AFTER A T:G MISPAIR organism=Homo sapiens DNA sequence DA(P2):DT(T12) DC(P3):DG(T11) DG(P4):DC(T10) DT(P5):DA(T9) DC(P6):DG(T8) DA(P7):DT(T7) DT(P8):DA(T6) DG(P9):DT(T5) chainA (314) ASN324 0 0 0 0 0 0 0 3 (368) LEU378 0 0 0 0 0 0 1 0 (372) ARG382 0 0 1 7 0 0 0 0 prot.sequence tgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcskNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsewsppltmlflcatkfsas >4j9p_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA POSTINSERTION BINARY COMPLEX WITH TA BASE PAIR organism=Homo sapiens DNA sequence DT(T4):DA(P10) DA(T5):DT(P9) DT(T6):DA(P8) DG(T7):DC(P7) DA(T8):DT(P6) DC(T9):DG(P5) DG(T10):DC(P4) DC(T11):DG(P3) DT(T12):DA(P2) chainA ( 37) GLN38 4 0 0 0 0 0 0 0 0 ( 47) ILE48 6 0 0 0 0 0 0 0 0 ( 60) ARG61 15 0 0 0 0 0 0 0 0 (317) SER322 0 0 1 0 0 0 0 0 0 (373) LEU378 0 0 2 0 0 0 0 0 0 (377) ARG382 0 0 0 0 0 14 10 0 0 prot.sequence atgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >4j9q_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA POSTINSERTION BINARY COMPLEX WITH TG MISPAIR organism=Homo sapiens DNA sequence DT(T5):DG(P10) DA(T6):DT(P9) DT(T7):DA(P8) DG(T8):DC(P7) DA(T9):DT(P6) DC(T10):DG(P5) DG(T11):DC(P4) DC(T12):DG(P3) DT(T13):DA(P2) chainA ( 16) PHE18 2 0 0 0 0 0 0 0 0 ( 36) GLN38 8 0 0 0 0 0 0 0 0 ( 46) ILE48 18 0 0 0 0 0 0 0 0 ( 59) ARG61 16 16 0 0 0 0 0 0 0 ( 87) LEU89 1 0 0 0 0 0 0 0 0 (317) SER322 0 0 1 0 0 0 0 0 0 (373) LEU378 0 0 5 2 0 0 0 0 0 (377) ARG382 0 0 0 0 0 10 16 0 0 prot.sequence tgqdrvvalvdmdcfFvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtRsmwaddakklcpdlllaqvresrgkanLtkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4j9r_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TRANSLOCATED BINARY COMPLEX WITH TG MISPAIR organism=Homo sapiens DNA sequence DA(P2):DT(T12) DC(P3):DG(T11) DG(P4):DC(T10) DT(P5):DA(T9) DC(P6):DG(T8) DA(P7):DT(T7) DT(P8):DA(T6) DG(P9):DT(T5) chainA (316) SER322 0 0 0 0 0 0 1 1 (318) ASN324 0 0 0 0 0 0 0 4 (372) LEU378 0 0 0 0 0 1 1 0 (376) ARG382 0 0 2 10 0 0 0 0 (414) PHE423 0 0 0 0 0 2 0 0 prot.sequence tgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntstewsppltmlFlcatkfsas >4j9s_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TRANSLOCATED BINARY COMPLEX: WITH TA BASE PAIR organism=Homo sapiens DNA sequence DT(T5):DA(P9) DA(T6):DT(P8) DT(T7):DA(P7) DG(T8):DC(P6) DA(T9):DT(P5) DC(T10):DG(P4) DG(T11):DC(P3) DT(T12):DA(P2) chainA ( 62) ARG61 19 0 0 0 0 0 0 0 (319) ASN324 1 0 0 0 0 0 0 0 (377) ARG382 0 0 0 0 0 0 6 0 (415) PHE423 0 0 1 0 0 0 0 0 prot.sequence hmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgtvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcskNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntstewsppltmlFlcatkfsas >4jbk_ABCD:HIN-2000_domain-like; title=MOLECULAR BASIS FOR ABROGATION OF ACTIVATION OF PRO-INFLAMMATORY CYTOKINES organism=Mus musculus DNA sequence DG(F1):DC(E14) DG(F2):DC(E13) DA(F3):DT(E12) DA(F4):DT(E11) DT(F5):DA(E10) DT(F6):DA(E9) DA(F7):DT(E8) DT(F8):DA(E7) DA(F9):DT(E6) DA(F10):DT(E5) DT(F11):DA(E4) DT(F12):DA(E3) DC(F13):DG(E2) DC(F14):DG(E1) chainA (174) ARG181 0 0 0 0 0 0 0 0 0 0 0 1 5 0 chainB ( 8) LYS10 0 0 0 0 0 0 0 0 0 0 0 2 5 0 chainC ( 8) LYS10 0 8 4 0 0 0 0 0 0 0 0 0 0 0 chainD (171) ARG181 0 7 1 0 0 0 0 0 0 0 0 0 0 0 (172) ASN184 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence tpkkniskgavlhekpmtvmvltatepfnykegkenmfhatvatesqyyrvkvfnmdlkekftenkfitiskyfnssgileinetatvseaapnqmfevpkniirsaketlkiskikeldsgtliygvfavekkkvndksitfkikdnednikvvwdkeqhninklqlfsfhlRkgngkpilhsgnhsfikg/tpkknisKgavlhekpmtvmvltatepfnykegkenmfhatvatesqyyrvkvfnmdlkekftenkfitiskyfnssgileinetatvseaapnqmfevpkniirsaketlkiskikeldsgtliygvfavekkkvndksitfkikdnednikvvwdkekgdklqlfsfhlrkgngkpilhsgnhsfikg/tpkknisKgavlhekpmtvmvltatepfnykegkenmfhatvatesqyyrvkvfnmdlkekftenkfitiskyfnssgileinetatvseaapnqmfevpkniirsaketlkiskikeldsgtliygvfavekkkvndksitfkikdnednikvvwdkedklqlfsfhlrkgngkpilhsgnhsfikg/tpkkniskgavlhekpmtvmvltatepfnykegkenmfhatvatesqyyrvkvfnmdlkekftenkfitiskyfnssgileinetatvseaapnqmfevpkniirsaketlkiskikeldsgtliygvfavekkkvndksitfkikdnednikvvwdkeqninqlfsfhlRNgkpilhsgnhsfikg >4jbk_B:HIN-2000_domain-like; title=MOLECULAR BASIS FOR ABROGATION OF ACTIVATION OF PRO-INFLAMMATORY CYTOKINES organism=Mus musculus DNA sequence DG(F1):DC(E14) DG(F2):DC(E13) DA(F3):DT(E12) DA(F4):DT(E11) DT(F5):DA(E10) DT(F6):DA(E9) DA(F7):DT(E8) DT(F8):DA(E7) DA(F9):DT(E6) DA(F10):DT(E5) DT(F11):DA(E4) DT(F12):DA(E3) DC(F13):DG(E2) DC(F14):DG(E1) chainB ( 8) LYS10 0 0 0 0 0 0 0 0 0 0 0 2 5 0 prot.sequence tpkknisKgavlhekpmtvmvltatepfnykegkenmfhatvatesqyyrvkvfnmdlkekftenkfitiskyfnssgileinetatvseaapnqmfevpkniirsaketlkiskikeldsgtliygvfavekkkvndksitfkikdnednikvvwdkekgdklqlfsfhlrkgngkpilhsgnhsfikg >4jbm_A:HIN-2000_domain-like; title=STRUCTURE OF MURINE DNA BINDING PROTEIN BOUND WITH DS DNA organism=Mus musculus DNA sequence DG(R2):DC(T13) DG(R3):DC(T12) DC(R4):DG(T11) DG(R5):DC(T10) DC(R6):DG(T9) DG(R7):DC(T8) DC(R8):DG(T7) DG(R9):DC(T6) DC(R10):DG(T5) DG(R11):DC(T4) DC(R12):DG(T3) DC(R13):DG(T2) chainA ( 86) ASN89 0 0 0 3 5 0 0 0 0 0 0 0 ( 89) LYS92 1 6 6 3 0 0 0 0 0 0 0 0 prot.sequence mdplvvtvlkainpfecegrqeifhatvatetdfffvkvlnaqfkdkfipkrtikisnylwhsnfmevtsssvvvdvesnhevpnNvvKraretprisklkiqpcgtivnglfkvqkiteekdrvlygihdktgtmevlvlgnpsktkceegdkirltffevskngvkiqlksgpcsffkvikaakpktd >4jcx_A:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.CSP231I OL OPERATOR COMPLEX organism=Citrobacter sp. RFL231 DNA sequence DA(C1):DT(D21) DC(C2):DG(D20) DA(C3):DT(D19) DC(C4):DG(D18) DT(C5):DA(D17) DA(C6):DT(D16) DA(C7):DT(D15) DG(C8):DC(D14) DG(C9):DC(D13) DA(C10):DT(D12) DA(C11):DT(D11) DA(C12):DT(D10) DA(C13):DT(D9) DC(C14):DG(D8) DT(C15):DA(D7) DT(C16):DA(D6) DA(C17):DT(D5) DG(C18):DC(D4) DT(C19):DA(D3) DA(C20):DT(D2) DA(C21):DT(D1) chainA ( 32) SER32 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA33 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN36 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN37 0 0 0 0 1 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) HIS43 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlirrlkdarlragisqeklgvlagideasaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyir >4jcx_AB:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.CSP231I OL OPERATOR COMPLEX organism=Citrobacter sp. RFL231 DNA sequence DA(C1):DT(D21) DC(C2):DG(D20) DA(C3):DT(D19) DC(C4):DG(D18) DT(C5):DA(D17) DA(C6):DT(D16) DA(C7):DT(D15) DG(C8):DC(D14) DG(C9):DC(D13) DA(C10):DT(D12) DA(C11):DT(D11) DA(C12):DT(D10) DA(C13):DT(D9) DC(C14):DG(D8) DT(C15):DA(D7) DT(C16):DA(D6) DA(C17):DT(D5) DG(C18):DC(D4) DT(C19):DA(D3) DA(C20):DT(D2) DA(C21):DT(D1) chainA ( 32) SER32 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA33 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN36 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN37 0 0 0 0 1 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) HIS43 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 32) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 ( 33) ALA33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 36) ASN36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 ( 37) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 1 1 0 0 0 0 ( 43) HIS43 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 prot.sequence mlirrlkdarlragisqeklgvlagideasaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyir/mlirrlkdarlragisqeklgvlagideasaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyirk >4jcy_A:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.CSP231I OR OPERATOR COMPLEX organism=Citrobacter sp. RFL231 DNA sequence DA(C1):DT(D21) DA(C2):DT(D20) DA(C3):DT(D19) DC(C4):DG(D18) DT(C5):DA(D17) DA(C6):DT(D16) DA(C7):DT(D15) DG(C8):DC(D14) DA(C9):DT(D13) DA(C10):DT(D12) DA(C11):DT(D11) DA(C12):DT(D10) DT(C13):DA(D9) DC(C14):DG(D8) DT(C15):DA(D7) DT(C16):DA(D6) DA(C17):DT(D5) DG(C18):DC(D4) DC(C19):DG(D3) DA(C20):DT(D2) DA(C21):DT(D1) chainA ( 30) SER30 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER32 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA33 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN36 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN37 0 0 0 0 1 1 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) HIS43 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfy >4jcy_AB:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.CSP231I OR OPERATOR COMPLEX organism=Citrobacter sp. RFL231 DNA sequence DT(D1):DA(C21) DT(D2):DA(C20) DG(D3):DC(C19) DC(D4):DG(C18) DT(D5):DA(C17) DA(D6):DT(C16) DA(D7):DT(C15) DG(D8):DC(C14) DA(D9):DT(C13) DT(D10):DA(C12) DT(D11):DA(C11) DT(D12):DA(C10) DT(D13):DA(C9) DC(D14):DG(C8) DT(D15):DA(C7) DT(D16):DA(C6) DA(D17):DT(C5) DG(D18):DC(C4) DT(D19):DA(C3) DT(D20):DA(C2) DT(D21):DA(C1) chainA ( 30) SER30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 32) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 ( 33) ALA33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 4 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 36) ASN36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 ( 37) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 1 1 0 0 0 0 ( 43) HIS43 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 chainB ( 30) SER30 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER32 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA33 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN36 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN37 0 0 0 0 1 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) HIS43 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfy/mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfy >4jgc_A:Uracil-DNA_glycosylase-like; title=HUMAN TDG N140A MUTANT IN A COMPLEX WITH 5-CARBOXYLCYTOSINE (5CAC) organism=Homo sapiens DNA sequence DA(D1):DT(C28) DG(D2):DC(C27) DC(D3):DG(C26) DT(D4):DA(C25) DG(D5):DC(C24) DT(D6):DA(C23) DC(D7):DG(C22) DC(D8):DG(C21) DA(D9):DT(C20) DC(D10):DG(C19) DT(D11):DA(C18) DG(D12):DC(C17) DC(D13):DG(C16) DT(D14):DA(C15) DC(D15):DG(C14) DA(D16):DT(C13) DG(D18):DC(C11) DT(D19):DA(C10) DA(D20):DT(C9) DC(D21):DG(C8) DA(D22):DT(C7) DG(D23):DC(C6) DA(D24):DT(C5) DG(D25):DC(C4) DC(D26):DG(C3) DT(D27):DA(C2) DG(D28):DC(C1) chainA ( 91) SER200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (139) LYS248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 (165) ALA274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (166) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 7 0 0 0 0 0 0 0 0 0 0 (167) CYS276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (168) ALA277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (169) GLN278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 prot.sequence sfngvseaelltktlpdiltfnldiviigiapglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSkdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvKnlefglqphkipdtetlcyvmpsssARCAQfpraqdkvhyyiklkdlrdqlkgiern >4jjn_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HETEROCHROMATIN PROTEIN SIR3 IN COMPLEX WITH A SILENCED YEAST NUCLEOSOME organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainA ( 2) HIS39 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 32) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 3) ARG36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 24) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRykpgtvalreirrfqkstellirkLpfqrlvreiaqdfktdlRfqssaigalqesveaylvslfedtnlaaihakrvtiqkkdiklarrlrgers/gakrhrkilrdniqgitkpairrlarrggvkRisgliyeevravlksflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfgg/asqsrsakagltfpvgrvhrllrrgnyaqriGsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihqnllp/kvRketyssyiykvlkqthpdtgisqksmsilnsfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkyssst/hrYkpgtvalreirrfqkstellirklpfqrlvreiaqdfktdlRfqssaigalqesveaylvslfedtnlaaihakrvtiqkkdiklarrlrger/kggakrhrkilrdniqgitkpaiRrlarrggvkrisgliyeevravlksflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfgg/qsrsakagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihqnllpkks/ketyssyiykvlkqthpdtgisqksmsIlnsfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkyssst >4jjn_E:Histone-fold; title=CRYSTAL STRUCTURE OF HETEROCHROMATIN PROTEIN SIR3 IN COMPLEX WITH A SILENCED YEAST NUCLEOSOME organism=? DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainE ( 3) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hrYkpgtvalreirrfqkstellirklpfqrlvreiaqdfktdlRfqssaigalqesveaylvslfedtnlaaihakrvtiqkkdiklarrlrger >4jl3_ABCD:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=CRYSTAL STRUCTURE OF MS6564-DNA COMPLEX organism=Mycobacterium smegmatis DNA sequence DT(E1):DA(F31) DC(E2):DG(F30) DA(E3):DT(F29) DT(E4):DA(F28) DA(E5):DT(F27) DA(E6):DT(F26) DA(E7):DT(F25) DC(E8):DG(F24) DG(E9):DC(F23) DA(E10):DT(F22) DG(E11):DC(F21) DA(E12):DT(F20) DC(E13):DG(F19) DG(E14):DC(F18) DG(E15):DC(F17) DT(E16):DA(F16) DA(E17):DT(F15) DC(E18):DG(F14) DG(E19):DC(F13) DT(E20):DA(F12) DC(E21):DG(F11) DT(E22):DA(F10) DC(E23):DG(F9) DG(E24):DC(F8) DT(E25):DA(F7) DC(E26):DG(F6) DT(E27):DA(F5) DT(E28):DA(F4) DG(E29):DC(F3) DT(E30):DA(F2) DG(E31):DC(F1) chainA ( 27) GLU37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 37) LYS47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 7 1 0 0 0 0 0 ( 38) GLN48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 1 0 0 0 0 ( 41) TYR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 chainB ( 1) ARG9 0 0 0 3 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLU37 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS47 0 0 0 0 0 0 0 0 0 0 1 5 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN48 0 0 0 0 0 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR49 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR51 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG52 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 2) SER8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 4 0 0 0 0 ( 31) GLU37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) LYS47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 7 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 0 0 0 0 0 0 0 0 ( 45) TYR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 chainD ( 1) ARG9 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLU37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence seksrvaiveatralllergfdglsiEavaakagvgKQTiYrwwpsrhalvadvlledadkilarmpktddvtadlaswagtlaaalttrrghamlktlmaaslehedtaarlregfsrpliesvrdrlrdedidadhaqaaadallgavvnavlsegrsysrqraetsariivaglrp/RrseksrvaiveatralllergfdglsiEavaakagvgKQTiYRwwpsrhalvadvlledadkilarmpktddvtadlaswagtlaaalttrrghamlktlmaaslehedtaarlregfsrpliesvrdrlrdedidadhaqaaadallgavvnavlsegrsysrqraetsariivaglrp/gSrrseksrvaiveatralllergfdglsiEavaakagvgKQtiYRwwpsrhalvadvlledadkilarmpktddvtadlaswagtlaaalttrrghamlktlmaaslehedtaarlregfsrpliesvrdrlrdedidadhaqaaadallgavvnavlsegrsysrqraetsariivaglr/RrseksrvaiveatralllergfdglsiEavaakagvgKQtiYRwwpsrhalvadvlledadkilarmpktddvtadlaswagtlaaalttrrghamlktlmaaslehedtaarlregfsrpliesvrdrlrdedidadhaqaaadallgavvnavlsegrsysrqraetsariivaglr >4jl3_B:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=CRYSTAL STRUCTURE OF MS6564-DNA COMPLEX organism=Mycobacterium smegmatis DNA sequence DT(E1):DA(F31) DC(E2):DG(F30) DA(E3):DT(F29) DT(E4):DA(F28) DA(E5):DT(F27) DA(E6):DT(F26) DA(E7):DT(F25) DC(E8):DG(F24) DG(E9):DC(F23) DA(E10):DT(F22) DG(E11):DC(F21) DA(E12):DT(F20) DC(E13):DG(F19) DG(E14):DC(F18) DG(E15):DC(F17) DT(E16):DA(F16) DA(E17):DT(F15) DC(E18):DG(F14) DG(E19):DC(F13) DT(E20):DA(F12) DC(E21):DG(F11) DT(E22):DA(F10) DC(E23):DG(F9) DG(E24):DC(F8) DT(E25):DA(F7) DC(E26):DG(F6) DT(E27):DA(F5) DT(E28):DA(F4) DG(E29):DC(F3) DT(E30):DA(F2) DG(E31):DC(F1) chainB ( 1) ARG9 0 0 0 3 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLU37 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS47 0 0 0 0 0 0 0 0 0 0 1 5 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN48 0 0 0 0 0 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR49 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR51 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG52 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RrseksrvaiveatralllergfdglsiEavaakagvgKQTiYRwwpsrhalvadvlledadkilarmpktddvtadlaswagtlaaalttrrghamlktlmaaslehedtaarlregfsrpliesvrdrlrdedidadhaqaaadallgavvnavlsegrsysrqraetsariivaglrp >4jqd_AB:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.CSP231I OL OPERATOR COMPLEX organism=Citrobacter sp. RFL231 DNA sequence DT(H1):DA(G21) DT(H2):DA(G20) DA(H3):DT(G19) DC(H4):DG(G18) DT(H5):DA(G17) DA(H6):DT(G16) DA(H7):DT(G15) DG(H8):DC(G14) DT(H9):DA(G13) DT(H10):DA(G12) DT(H11):DA(G11) DT(H12):DA(G10) DC(H13):DG(G9) DC(H14):DG(G8) DT(H15):DA(G7) DT(H16):DA(G6) DA(H17):DT(G5) DG(H18):DC(G4) DT(H19):DA(G3) DG(H20):DC(G2) DT(H21):DA(G1) chainA ( 30) SER30 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER32 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA33 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN36 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN37 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) HIS43 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 30) SER30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 32) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 ( 33) ALA33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 36) ASN36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 ( 37) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 1 0 0 0 0 ( 43) HIS43 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 prot.sequence mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyir/mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyir >4jqd_E:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.CSP231I OL OPERATOR COMPLEX organism=Citrobacter sp. RFL231 DNA sequence DA(C1):DT(D21) DC(C2):DG(D20) DA(C3):DT(D19) DC(C4):DG(D18) DT(C5):DA(D17) DA(C6):DT(D16) DA(C7):DT(D15) DG(C8):DC(D14) DG(C9):DC(D13) DA(C10):DT(D12) DA(C11):DT(D11) DA(C12):DT(D10) DA(C13):DT(D9) DC(C14):DG(D8) DT(C15):DA(D7) DT(C16):DA(D6) DA(C17):DT(D5) DG(C18):DC(D4) DT(C19):DA(D3) DA(C20):DT(D2) DA(C21):DT(D1) chainE ( 30) SER30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 32) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 ( 33) ALA33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 4 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 36) ASN36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 ( 37) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 ( 43) HIS43 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 prot.sequence mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyirkka >4jqd_EF:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.CSP231I OL OPERATOR COMPLEX organism=Citrobacter sp. RFL231 DNA sequence DT(D1):DA(C21) DT(D2):DA(C20) DA(D3):DT(C19) DC(D4):DG(C18) DT(D5):DA(C17) DA(D6):DT(C16) DA(D7):DT(C15) DG(D8):DC(C14) DT(D9):DA(C13) DT(D10):DA(C12) DT(D11):DA(C11) DT(D12):DA(C10) DC(D13):DG(C9) DC(D14):DG(C8) DT(D15):DA(C7) DT(D16):DA(C6) DA(D17):DT(C5) DG(D18):DC(C4) DT(D19):DA(C3) DG(D20):DC(C2) DT(D21):DA(C1) chainE ( 30) SER30 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER32 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA33 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN36 0 0 0 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN37 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) HIS43 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) SER30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 32) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 ( 33) ALA33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 36) ASN36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 ( 37) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 1 0 0 0 0 ( 43) HIS43 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 prot.sequence mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyirkka/mlirrlkdarlragisqeklgvlagideaSaSARmNQyekgkHapdfemanrlakvlkipvsylytpeddlaqiiltwnelneqerkrinfyi >4juo_AC:Type_II_DNA_topoisomerase;Ribosomal_protein_S5_domain_2-like;ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase; title=A LOW-RESOLUTION THREE-GATE STRUCTURE OF TOPOISOMERASE IV FROM STREPTOCOCCUS PNEUMONIAE IN SPACE GROUP H32 organism=STREPTOCOCCUS PNEUMONIAE / STREPTOCOCCUS PNEUMONIAE SEROTYPE 4 DNA sequence DA(F5):DT(E15) DT(F6):DA(E14) DT(F7):DA(E13) DC(F8):DG(E12) DA(F9):DT(E11) DT(F10):DA(E10) DG(F11):DC(E9) chainA ( 77) SER79 1 0 0 0 0 0 0 ( 78) SER80 1 3 0 0 0 0 0 (168) ILE170 0 0 0 8 19 0 0 chainC (383) LYS458 0 2 1 0 0 0 0 prot.sequence niqnmsledimgerfgryskyiiqdralpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdSSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltndvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkftprlssled/avrkrpgmyigstdgaglhhlvweivdnavdealsdridvtinkdgsltvqdhtveviftilhaggkflhgvgssvvnalsswleveitrdgavykqrfenggkpvttlkkigtapksktgtkvtfmpdatifsttdfkyntiserlnesafllknvtlsltdkrtdeaiefhyevqdfvsylnedkeiltpvlyfegedngfqvevalqyndgfsdnilsfvnnvrtkdggthetglksaitkvmndyarktgllkekegsdyreglaavlsilvpeehlqfegqtkdklgsplarpvvdgivadkltfflmengelasnlirkaikardareaarkarltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyiapplykayawtdgeleelrklqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >4juo_C:Type_II_DNA_topoisomerase;Ribosomal_protein_S5_domain_2-like;ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase; title=A LOW-RESOLUTION THREE-GATE STRUCTURE OF TOPOISOMERASE IV FROM STREPTOCOCCUS PNEUMONIAE IN SPACE GROUP H32 organism=STREPTOCOCCUS PNEUMONIAE SEROTYPE 4 DNA sequence DC(E9):DG(F11) DA(E10):DT(F10) DT(E11):DA(F9) DG(E12):DC(F8) DA(E13):DT(F7) DA(E14):DT(F6) DT(E15):DA(F5) chainC (383) LYS458 0 0 0 0 1 2 0 prot.sequence avrkrpgmyigstdgaglhhlvweivdnavdealsdridvtinkdgsltvqdhtveviftilhaggkflhgvgssvvnalsswleveitrdgavykqrfenggkpvttlkkigtapksktgtkvtfmpdatifsttdfkyntiserlnesafllknvtlsltdkrtdeaiefhyevqdfvsylnedkeiltpvlyfegedngfqvevalqyndgfsdnilsfvnnvrtkdggthetglksaitkvmndyarktgllkekegsdyreglaavlsilvpeehlqfegqtkdklgsplarpvvdgivadkltfflmengelasnlirkaikardareaarkarltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyiapplykayawtdgeleelrklqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >4juz_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF GAMMA-OHPDG ADDUCT MODIFIED DNA (ZERO PRIMER) WITH DNA POLYMERASE IV AND INCOMING DGTP organism=Sulfolobus solfataricus DNA sequence DG(C19):DC(B18) DG(C20):DC(B17) DG(C21):DC(B16) DG(C22):DC(B15) DG(C23):DC(B14) DA(C24):DT(B13) DA(C25):DT(B12) DG(C26):DC(B11) DG(C27):DC(B10) DA(C28):DT(B9) DT(C29):DA(B8) DT(C30):DA(B7) DC(C31):DG(B6) DC(C32):DC(B4) chainA ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 6 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvrfskfi >4jv0_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=RING-OPENING OF THE -OH-PDG ADDUCT IN TERNARY COMPLEXES WITH THE SULFOLOBUS SOLFATARICUS DNA POLYMERASE DPO4 organism=Sulfolobus solfataricus DNA sequence DG(C19):DC(B18) DG(C20):DC(B17) DG(C21):DC(B16) DG(C22):DC(B15) DG(C23):DC(B14) DA(C24):DT(B13) DA(C25):DT(B12) DG(C26):DC(B11) DG(C27):DC(B10) DA(C28):DT(B9) DT(C29):DA(B8) DT(C30):DA(B7) DC(C31):DG(B6) DC(C32):DT(B4) chainA ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (336) ARG336 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >4jv1_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF GAMMA-OHPDG ADDUCT MODIFIED DNA WITH DNA (-1 PRIMER) POLYMERASE IV AND INCOMING DGTP organism=Sulfolobus solfataricus DNA sequence DG(C501):DC(B618) DG(C502):DC(B617) DG(C503):DC(B616) DG(C504):DC(B615) DG(C505):DC(B614) DA(C506):DT(B613) DA(C507):DT(B612) DG(C508):DC(B611) DG(C509):DC(B610) DA(C510):DT(B609) DT(C511):DA(B608) DT(C512):DA(B607) DC(C513):DG(B606) chainA (336) ARG336 0 0 0 0 0 0 0 0 0 0 0 3 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >4jv2_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF GAMMA-OHPDG ADDUCT MODIFIED DNA WITH DNA (-1 PRIMER) POLYMERASE IV AND INCOMING DATP organism=Sulfolobus solfataricus DNA sequence DG(B606):DC(C513) DA(B607):DT(C512) DA(B608):DT(C511) DT(B609):DA(C510) DC(B610):DG(C509) DC(B611):DG(C508) DT(B612):DA(C507) DT(B613):DA(C506) DC(B614):DG(C505) DC(B615):DG(C504) DC(B616):DG(C503) DC(B617):DG(C502) DC(B618):DG(C501) chainA (336) ARG336 0 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >4jwm_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF D256E MUTANT OF DNA POLYMERASE BETA organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 31 0 0 0 0 ( 26) LYS35 3 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrrieirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4jwn_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF D256A MUTANT OF DNA POLYMERASE BETA organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) chainA (225) LYS234 0 0 0 0 0 0 0 6 2 0 (262) TYR271 0 0 0 0 0 0 0 0 0 8 (274) ARG283 0 0 0 0 0 0 0 0 0 3 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrriairlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4k1g_A:Xylose_isomerase-like; title=STRUCTURE OF E. COLI NFO(ENDO IV)-H69A MUTANT BOUND TO A CLEAVED DNA DUPLEX CONTAINING A ALPHADA:T BASEPAIR organism=Escherichia coli DNA sequence DG(F341):DC(E305) DA(F342):DT(E304) DC(F343):DG(E303) DG(F344):DC(E302) DC(F345):DG(E301) chainA ( 37) ARG37 9 1 0 0 0 ( 72) TYR72 47 0 0 0 0 ( 73) LEU73 5 0 0 0 0 (230) ARG230 0 3 5 1 0 prot.sequence mkyigahvsaagglanaairaaeidatafalftknqRqwraaplttqtidefkaacekyhytsaqilpadsYLinlghpvtealeksrdafidemqrceqlglsllnfhpgshlmqiseedclariaesinialdktqgvtavientagQgsnlgfkfehlaaiidgvedksrvgvcidtchafaagydlrtpaecektfadfartvgfkylrgmhlndakstfgsrvdRhhslgegnighdafrwimqddrfdgipliletinpdiwaeeiawlkaqqteka >4k8x_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX OF 9N DNA POLYMERASE IN THE REPLICATIVE STATE organism=THERMOCOCCUS DNA sequence DC(P1):DG(T16) DG(P2):DC(T15) DC(P3):DG(T14) DG(P4):DC(T13) DA(P5):DT(T12) DA(P6):DT(T11) DC(P7):DG(T10) DT(P8):DA(T9) DG(P9):DC(T8) DC(P10):DG(T7) DG(P11):DC(T6) DOC(P12):DG(T5) chainA (494) TYR494 0 0 0 0 0 0 0 0 0 0 0 2 (592) LYS592 0 0 0 0 0 0 0 0 0 7 9 0 (612) ARG612 0 0 0 0 0 0 0 4 9 0 0 0 (614) ASP614 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mildtdyitengkpvirvfkkengefkieydrtfepyfyallkddsaiedvkkvtakrhgtvvkvkraekvqkkflgrpievwklyfnhpqdvpairdrirahpavvdiyeydipfakrylidkglipmegdeeltmlafaiatlyhegeefgtgpilmisyadgsearvitwkkidlpyvdvvstekemikrflrvvrekdpdvlityngdnfdfaylkkrceelgikftlgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgkpkekvyaeeiaqawesgeglervarysmedakvtyelgreffpmeaqlsrligqslwdvsrsstgnlvewfllrkaykrnelapnkpderelarrrggyaggyvkeperglwdnivyldfrslYpsiiithnvspdtlnregckeydvapevghkfckdfpgfipsllgdlleerqkikrkmkatvdplekklldyrqraikilansfYgyygyakarwyckecaesvtawgreyiemvireleekfgfkvlyadtdglhatipgadaetvkkkakeflkyinpklpglleleyegfyvrgffvtkKkyavideegkittrgleivRrDwseiaketqarvleailkhgdveeavrivkevteklskyevppeklviheqitrdlrdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipadefdptkhrydaeyyienqvlpaverilkafgyrkedlryqk >4k8z_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KOD POLYMERASE IN BINARY COMPLEX WITH DSDNA organism=THERMOCOCCUS KODAKARENSIS DNA sequence DT(T5):2DA(P12) DC(T6):DG(P11) DG(T7):DC(P10) DC(T8):DG(P9) DA(T9):DT(P8) DG(T10):DC(P7) DT(T11):DA(P6) DT(T12):DA(P5) DC(T13):DG(P4) DG(T14):DC(P3) DC(T15):DG(P2) DG(T16):DC(P1) chainA (494) TYR494 4 0 0 0 0 0 0 0 0 0 0 0 (592) LYS592 0 10 5 0 0 0 0 0 0 0 0 0 (612) ARG612 0 0 0 8 3 0 0 0 0 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqraikilansyYgyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKKyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklviheqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdptkhkydaeyyienqvlpaverilrafgyrkedlr >4k96_B: title=STRUCTURE OF BINARY COMPLEX OF CGAS WITH BOUND DSDNA organism=Mus musculus DNA sequence DT(H2):DA(G17) DT(H3):DA(G16) DC(H4):DG(G15) DG(H5):DC(G14) DT(H6):DA(G13) DC(H7):DG(G12) DT(H8):DA(G11) DT(H9):DA(G10) DC(H10):DG(G9) DG(H11):DC(G8) DG(H12):DC(G7) DC(H13):DG(G6) DA(H14):DT(G5) DA(H15):DT(G4) DT(H16):DA(G3) DT(H17):DA(G2) chainB ( 16) ARG161 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 prot.sequence spdklkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyeHvkisapnefdvmfklevprielqeyyetgafylvkfkprgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifd >4k97_A: title=STRUCTURE OF TERNARY COMPLEX OF CGAS WITH DSDNA AND BOUND ATP organism=Mus musculus DNA sequence DC(E4):DG(D15) DG(E5):DC(D14) DT(E6):DA(D13) DC(E7):DG(D12) DT(E8):DA(D11) DT(E9):DA(D10) DC(E10):DG(D9) DG(E11):DC(D8) DG(E12):DC(D7) DC(E13):DG(D6) DA(E14):DT(D5) DA(E15):DT(D4) DT(E16):DA(D3) DT(E17):DA(D2) chainA ( 13) ARG161 0 0 0 8 9 3 0 0 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyeHvkisapnefdvmfklevprielqeyyetgafylvkfkplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifd >4k98_A: title=STRUCTURE OF TERNARY COMPLEX OF CGAS WITH DSDNA AND BOUND 5 -PPPG(2 ,5 )PG organism=Mus musculus DNA sequence DC(E4):DG(D15) DG(E5):DC(D14) DT(E6):DA(D13) DC(E7):DG(D12) DT(E8):DA(D11) DT(E9):DA(D10) DC(E10):DG(D9) DG(E11):DC(D8) DG(E12):DC(D7) DC(E13):DG(D6) DA(E14):DT(D5) DA(E15):DT(D4) DT(E16):DA(D3) DT(E17):DA(D2) chainA ( 13) ARG161 0 0 0 10 5 2 0 0 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdk >4k99_A: title=STRUCTURE OF TERNARY COMPLEX OF CGAS WITH DSDNA AND BOUND 5 -PPPDG(2 ,5 )PDG organism=Mus musculus DNA sequence DC(E4):DG(D15) DG(E5):DC(D14) DT(E6):DA(D13) DC(E7):DG(D12) DT(E8):DA(D11) DT(E9):DA(D10) DC(E10):DG(D9) DG(E11):DC(D8) DG(E12):DC(D7) DC(E13):DG(D6) DA(E14):DT(D5) DA(E15):DT(D4) DT(E16):DA(D3) DT(E17):DA(D2) chainA ( 13) ARG161 0 0 0 12 5 0 0 0 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdk >4k9a_A: title=STRUCTURE OF TERNARY COMPLEX OF CGAS WITH DSDNA AND BOUND 5 -PG(2 ,5 )PA organism=Mus musculus DNA sequence DA(D2):DT(E17) DA(D3):DT(E16) DT(D4):DA(E15) DT(D5):DA(E14) DG(D6):DC(E13) DC(D7):DG(E12) DC(D8):DG(E11) DG(D9):DC(E10) DA(D10):DT(E9) DA(D11):DT(E8) DG(D12):DC(E7) DA(D13):DT(E6) DC(D14):DG(E5) DG(D15):DC(E4) chainA ( 13) ARG161 0 0 0 0 0 0 0 0 0 6 10 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdk >4k9b_A: title=STRUCTURE OF TERNARY COMPLEX OF CGAS WITH DSDNA AND BOUND C[G(2 ,5 )PA(3 ,5 )P] organism=Mus musculus DNA sequence DA(D2):DT(E17) DA(D3):DT(E16) DT(D4):DA(E15) DT(D5):DA(E14) DG(D6):DC(E13) DC(D7):DG(E12) DC(D8):DG(E11) DG(D9):DC(E10) DA(D10):DT(E9) DA(D11):DT(E8) DG(D12):DC(E7) DA(D13):DT(E6) DC(D14):DG(E5) DG(D15):DC(E4) chainA ( 13) ARG161 0 0 0 0 0 0 0 0 0 4 6 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkrgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdk >4ka4_ADE:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A PROTEOLYTICALLY DEFINED ZBETA DOMAIN OF HUMAN DAI (ZBP1, DLM-1) organism=Homo sapiens DNA sequence DC(F1):DG(G6) DG(F2):DC(G5) DC(F3):DG(G4) DG(F4):DC(G3) DC(F5):DG(G2) DG(F6):DC(G1) DC(C1):DG(H6) DG(C2):DC(H5) DC(C3):DG(H4) DG(C4):DC(H3) DC(C5):DG(H2) DG(C6):DC(H1) chainA ( 41) TYR145 0 0 0 0 0 0 0 0 0 10 0 0 chainD ( 40) TYR145 0 0 0 0 0 0 0 0 14 0 0 0 chainE ( 39) TYR145 0 0 0 14 0 0 0 0 0 0 0 0 prot.sequence fsqqreediyrflkdngpqralviaqalgmrtakdvnrdlYrmksrhlldmdeqskawtiy/sqqreediyrflkdngpqralviaqalgmrtakdvnrdlYrmksrhlldmdeqskawtiy/qqreediyrflkdngpqralviaqalgmrtakdvnrdlYrmksrhlldmdeqskawtiy >4ka4_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A PROTEOLYTICALLY DEFINED ZBETA DOMAIN OF HUMAN DAI (ZBP1, DLM-1) organism=Homo sapiens DNA sequence DC(F1):DG(G6) DG(F2):DC(G5) DC(F3):DG(G4) DG(F4):DC(G3) DC(F5):DG(G2) DG(F6):DC(G1) chainB ( 39) TYR145 0 0 14 0 0 0 prot.sequence qqreediyrflkdngpqralviaqalgmrtakdvnrdlYrmksrhlldmdeqskawtiy >4kaz_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF RNASE T IN COMPLEX WITH A Y STRUCTURED DNA organism=Escherichia coli DNA sequence DG(B3):DC(B18) DG(B4):DC(B17) DC(B5):DG(B16) DC(B6):DG(B15) DC(B7):DG(B14) chainA (156) VAL163 2 0 0 0 0 prot.sequence tglcdrfrgfypvvidvetagfnaktdalleiaaitlkmdeqgwlmpdttlhfhvepfvganlqpealafngidpndpdrgavseyealheifkvvrkgikasgcnraimvahnanfdhsfmmaaaeraslkrnpfhpfatfdtaalaglalgqtVlsKacqtagmdfdstqahsalydtertavlfceivnrwkrlggwplsaae >4kb6_A: title=STRUCTURE OF PORCINE CYCLIC GMP AMP SYNTHASE (CGAS) IN COMPLEX WITH DNA, ATP AND GTP organism=SUS SCROFA DNA sequence DG(C2):DC(B13) DA(C3):DT(B12) DC(C4):DG(B11) DG(C5):DC(B10) DC(C6):DG(B9) DT(C7):DA(B8) DA(C8):DT(B7) DG(C9):DC(B6) DC(C10):DG(B5) DG(C11):DC(B4) DT(C12):DA(B3) DC(C13):DG(B2) DG(C14):DC(B1) chainA ( 16) ARG150 0 0 0 0 0 10 7 0 0 0 0 0 0 ( 58) ARG192 0 0 0 0 0 0 0 2 2 0 0 0 0 prot.sequence gawklqtvlekvrlsRheiseaaevvnwvvehllrrlqggesefkgvallrtgsyyeRvkisapnqfnvmfklevpriqleeycnsgahyfvkfpleqflekeilsaskmlskfrkiikeeikniedtgvtverkrrgspavtlliskpkeisvdiilalesksswpastqkglpisqwlgakvknnlkrqpfylvpkhakgfqeetwrlsfshiekdilknhgqsktcceidgvkccrkeclklmkylleqlkkkfgnrrelakfcsyhvktaffhvctqdphdnqwhlknleccfdncvayflqclkteqlanyfipgvnlfsrdlidkpskeflskqieyernngfpvfw >4kdp_AB:"Winged_helix"_DNA-binding_domain; title=TCAR-SSDNA COMPLEX CRYSTAL STRUCTURE REVEALS THE NOVEL SSDNA BINDING MECHANISM OF THE MARR FAMILY PROTEINS organism=Staphylococcus epidermidis DNA sequence DC(H10) DG(H9) DC(H8) DG(H7) DC(H6) DG(H5) DC(H1) DG(H2) DC(H3) DA(H4):DG(H5) chainA ( 37) SER37 0 0 0 0 0 0 0 3 0 0 ( 65) LYS65 0 0 0 10 2 0 0 0 0 0 ( 70) ARG70 0 0 0 0 0 0 0 0 1 0 ( 74) LYS74 0 0 0 0 0 0 0 8 0 0 ( 92) GLN92 0 0 0 11 0 0 0 0 0 0 chainB ( 37) SER37 0 0 0 0 0 0 0 0 0 4 ( 39) GLU39 0 0 0 0 0 0 0 0 0 1 ( 65) LYS65 0 0 0 0 0 0 8 0 0 0 ( 70) ARG70 0 0 0 0 0 0 0 0 5 0 ( 71) ARG71 0 0 0 0 0 0 0 0 0 26 ( 74) LYS74 0 0 0 0 0 6 0 0 0 7 prot.sequence mvrriedhisflekfindvntltakllkdlqteygiSaeqshvlnmlsiealtvgqitekqgvnKaavsRrvkKllnaelvklekpdsntdQRlkiiklsnkgkkyikerkaimshiasdmtsdfdskeiekvrqvleiidyriqsytskl/mvrriedhisflekfindvntltakllkdlqteygiSaEqshvlnmlsiealtvgqitekqgvnKaavsRRvkKllnaelvklekpdsntdqrlkiiklsnkgkkyikerkaimshiasdmtsdfdskeiekvrqvleiidyriqsytskl >4kdp_B:"Winged_helix"_DNA-binding_domain; title=TCAR-SSDNA COMPLEX CRYSTAL STRUCTURE REVEALS THE NOVEL SSDNA BINDING MECHANISM OF THE MARR FAMILY PROTEINS organism=Staphylococcus epidermidis DNA sequence DC(H10) DG(H9) DC(H8) DG(H7) DC(H6) DG(H5) DC(H1) DG(H2) DC(H3) DA(H4):DG(H5) chainB ( 37) SER37 0 0 0 0 0 0 0 0 0 4 ( 39) GLU39 0 0 0 0 0 0 0 0 0 1 ( 65) LYS65 0 0 0 0 0 0 8 0 0 0 ( 70) ARG70 0 0 0 0 0 0 0 0 5 0 ( 71) ARG71 0 0 0 0 0 0 0 0 0 26 ( 74) LYS74 0 0 0 0 0 6 0 0 0 7 prot.sequence mvrriedhisflekfindvntltakllkdlqteygiSaEqshvlnmlsiealtvgqitekqgvnKaavsRRvkKllnaelvklekpdsntdqrlkiiklsnkgkkyikerkaimshiasdmtsdfdskeiekvrqvleiidyriqsytskl >4kfc_AB:CheY-like; title=CRYSTAL STRUCTURE OF A HYPERACTIVE MUTANT OF RESPONSE REGULATOR KDPE COMPLEXED TO ITS PROMOTER DNA organism=Escherichia coli DNA sequence DC(Y1):DG(Z30) DA(Y2):DT(Z29) DT(Y3):DA(Z28) DT(Y4):DA(Z27) DT(Y5):DA(Z26) DT(Y6):DA(Z25) DT(Y7):DA(Z24) DA(Y8):DT(Z23) DT(Y9):DA(Z22) DA(Y10):DT(Z21) DC(Y11):DG(Z20) DT(Y12):DA(Z19) DT(Y13):DA(Z18) DT(Y14):DA(Z17) DT(Y15):DA(Z16) DT(Y16):DA(Z15) DT(Y17):DA(Z14) DT(Y18):DA(Z13) DA(Y19):DT(Z12) DC(Y20):DG(Z11) DA(Y21):DT(Z10) DC(Y22):DG(Z9) DC(Y23):DG(Z8) DC(Y24):DG(Z7) DC(Y25):DG(Z6) DG(Y26):DC(Z5) DC(Y27):DG(Z4) DC(Y28):DG(Z3) DC(Y29):DG(Z2) DG(Y30):DC(Z1) chainA (188) HIS190 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) TYR191 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) ARG193 0 0 0 0 0 0 0 1 1 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) ILE194 0 0 0 0 1 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) TYR195 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (189) HIS190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 2 0 0 0 0 0 0 0 0 0 0 0 (192) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 14 0 0 0 0 0 0 0 0 0 (193) ILE194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 (194) TYR195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence amanvlivedeqairrflrtalegdgmrvfeaetlqrglleaatrkpdliildlglpdgdgiefirdlrqwsavpvivlsarseesdkiaaldagaddylskpfgigelqarlrvalrrhsapdplvkfsdvtvdlaarvihrgeeevhltpiefrllavllnnagkvltqrqllnqvwgpnavehsHYlRIYmghlrqkleqdparprhfitatgigyrfml/amanvlivedeqairrflrtalegdgmrvfeaetlqrglleaatrkpdliildlglpdgdgiefirdlrqwsavpvivlsarseesdkiaaldagaddylskpfgigelqarlrvalrrhstapdplvkfsdvtvdlaarvihrgeeevhltpiefrllavllnnagkvltqrqllnqvwgpnavehsHylRIYmghlrqkleqdparprhfitatgigyrfml >4kfc_B:CheY-like; title=CRYSTAL STRUCTURE OF A HYPERACTIVE MUTANT OF RESPONSE REGULATOR KDPE COMPLEXED TO ITS PROMOTER DNA organism=Escherichia coli DNA sequence DC(Y1):DG(Z30) DA(Y2):DT(Z29) DT(Y3):DA(Z28) DT(Y4):DA(Z27) DT(Y5):DA(Z26) DT(Y6):DA(Z25) DT(Y7):DA(Z24) DA(Y8):DT(Z23) DT(Y9):DA(Z22) DA(Y10):DT(Z21) DC(Y11):DG(Z20) DT(Y12):DA(Z19) DT(Y13):DA(Z18) DT(Y14):DA(Z17) DT(Y15):DA(Z16) DT(Y16):DA(Z15) DT(Y17):DA(Z14) DT(Y18):DA(Z13) DA(Y19):DT(Z12) DC(Y20):DG(Z11) DA(Y21):DT(Z10) DC(Y22):DG(Z9) DC(Y23):DG(Z8) DC(Y24):DG(Z7) DC(Y25):DG(Z6) DG(Y26):DC(Z5) DC(Y27):DG(Z4) DC(Y28):DG(Z3) DC(Y29):DG(Z2) DG(Y30):DC(Z1) chainB (189) HIS190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 2 0 0 0 0 0 0 0 0 0 0 0 (192) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 14 0 0 0 0 0 0 0 0 0 (193) ILE194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 (194) TYR195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence amanvlivedeqairrflrtalegdgmrvfeaetlqrglleaatrkpdliildlglpdgdgiefirdlrqwsavpvivlsarseesdkiaaldagaddylskpfgigelqarlrvalrrhstapdplvkfsdvtvdlaarvihrgeeevhltpiefrllavllnnagkvltqrqllnqvwgpnavehsHylRIYmghlrqkleqdparprhfitatgigyrfml >4kgc_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE CONTAINING (ETA6-P-CYMENE)-(1, 2- ETHYLENEDIAMINE)-RUTHENIUM organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) HIS39 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgisskaMsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgisskaMsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4khn_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF THE D714A MUTANT OF RB69 DNA POLYMERASE organism=Enterobacteria phage RB69 DNA sequence DG(D103):DC(C17) DC(D104):DG(C16) DG(D105):DC(C15) DG(D106):DC(C14) DA(D107):DT(C13) DC(D108):DG(C12) DT(D109):DA(C11) DG(D110):DC(C10) DC(D111):DG(C9) DT(D112):DA(C8) DT(D113):DA(C7) DA(D114):DT(C6) DC(D115):DG(C5) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 7 6 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwamegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4khq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF RB69 MUTANT L415F WIT DUMPNPP organism=Enterobacteria phage RB69 DNA sequence DG(T4):DC(P115) DG(T5):DC(P114) DT(T6):DA(P113) DA(T7):DT(P112) DA(T8):DT(P111) DG(T9):DC(P110) DC(T10):DG(P109) DA(T11):DT(P108) DG(T12):DC(P107) DT(T13):DA(P106) DC(T14):DG(P105) DC(T15):DG(P104) DG(T16):DC(P103) DC(T17):DG(P102) chainA (564) TYR567 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (703) LYS706 0 6 4 0 0 0 0 0 0 0 0 0 0 0 (731) LYS734 0 0 0 1 2 0 0 0 0 0 0 0 0 0 (797) LYS800 0 0 0 0 0 0 0 3 6 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkviensreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsfypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygDTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfd >4khs_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF RB69 MUTANT L415F WITH A RIBONUCLEOTIDE AT 0 POSITION organism=Enterobacteria phage RB69 DNA sequence DG(P102) DC(P103) DG(P104) DG(P105) DA(P106) DC(P107) DT(P108) DG(P109) DC(P110) DT(P111) DT(P112) DA(P113) DC(P114) DC(P115) chainA (698) LYS706 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (726) LYS734 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsfypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfd >4khu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF RB69 MUTANT L415F WITH A RIBONUCLEOTIDE AT -1 POSITION organism=Enterobacteria phage RB69 DNA sequence DG(P102) DC(P103) DG(P104) DG(P105) DA(P106) DC(P107) DT(P108) DG(P109) DC(P110) DT(P111) DT(P112) DA(P113) DC(P114) DC(P115) chainA (702) LYS706 0 0 0 0 0 0 0 0 0 0 0 1 5 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkviesreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsfypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfd >4khw_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF RB69 MUTANT L415F WITH RIBONUCLEOTIDE AT -2 POSITION organism=Enterobacteria phage RB69 DNA sequence DG(P102) DC(P103) DG(P104) DG(P105) DA(P106) DC(P107) DT(P108) DG(P109) DC(P110) DT(P111) DT(P112) DA(P113) DC(P114) DC(P115) chainA (702) LYS706 0 0 0 0 0 0 0 0 0 0 0 1 5 0 (730) LYS734 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkviesreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsfypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfd >4khy_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF RB69 MUTANT L415F WITH RIBONUCLEOTIDE AT -3 POSITION organism=Enterobacteria phage RB69 DNA sequence DG(P102) DC(P103) DG(P104) DG(P105) DA(P106) DC(P107) DT(P108) DG(P109) DC(P110) DT(P111) DT(P112) DA(P113) DC(P114) DC(P115) chainA (703) LYS706 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (731) LYS734 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (797) LYS800 0 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkviensreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsfypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfd >4ki4_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF RB69 MUTANT L415F WITH RIBONUCLEOTIDES AT 0 AND -1 POSITION organism=Enterobacteria phage RB69 DNA sequence DG(P102) DC(P103) DG(P104) DG(P105) DA(P106) DC(P107) DT(P108) DG(P109) DC(P110) DT(P111) DT(P112) DA(P113) DC(P114) DC(P115) chainA (704) LYS706 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (732) LYS734 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (798) LYS800 0 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkviensreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsfypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4ki6_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF RB69 MUTANT L415F WITH RIBONUCLEOTIDES AT -1 AND - 2 POSITION organism=Enterobacteria phage RB69 DNA sequence DG(P102) DC(P103) DG(P104) DG(P105) DA(P106) DC(P107) DT(P108) DG(P109) DC(P110) DT(P111) DT(P112) DA(P113) DC(P114) DC(P115) chainA (706) LYS706 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (800) LYS800 0 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsfypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslygalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfd >4kis_D: title=CRYSTAL STRUCTURE OF A LSR-DNA COMPLEX organism=Listeria innocua DNA sequence DT(K26):DA(L24) DT(K27):DA(L23) DT(K28):DA(L22) DA(K29):DT(L21) DG(K30):DC(L20) DT(K31):DA(L19) DT(K32):DA(L18) DC(K33):DG(L17) DC(K34):DG(L16) DT(K35):DA(L15) DC(K36):DG(L14) DG(K37):DC(L13) DT(K38):DA(L12) DT(K39):DA(L11) DT(K40):DA(L10) DT(K41):DA(L9) DC(K42):DG(L8) DT(K43):DA(L7) DC(K44):DG(L6) DT(K45):DA(L5) DC(K46):DG(L4) DG(K47):DC(L3) DT(K48):DA(L2) DT(K49):DA(L1) DG(K50):DC(L0) chainD ( 4) MET136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 20 ( 8) LYS140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 ( 24) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 8 6 0 0 0 0 ( 75) TYR207 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASN208 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 (127) ASN259 0 0 0 0 0 0 0 0 0 8 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) LYS262 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) LYS286 0 0 0 15 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ASP287 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) THR288 0 0 5 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) SER290 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) TYR295 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) TYR297 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) TYR299 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) LYS306 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rdrMvmgKikrieaglplttakgRtfgydvidtklyineeeakqlrliydifeeeqsitflqkrlkklgfkvrtYNrynnwltndlycgyvsykdkvhvkgihepiiseeqfyrvqeifsrmgknpNmnKesasllnnlvvcskcglgfvhrrKDTvSrgkkYhYrYyscktyKhthelekcgnkiwradkleeliidrvnnysfasrnidkelneklkieidaqinyyeaqieaneelkknkkiqefnslefrekqlylkslinkiyidgeqvtiewllehhhhhh >4kle_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MATCHED REACTANT COMPLEX WITH MG2+, 10 S organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 34 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4klf_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MATCHED REACTANT COMPLEX WITH MG2+, 20 S organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 33 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4klg_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MATCHED PRODUCT COMPLEX WITH MG2+, 40 S organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) DC(P11):DG(T6) chainA (225) LYS234 0 0 0 0 0 0 0 5 0 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 9 7 (267) ASP276 0 0 0 0 0 0 0 0 0 0 7 (270) ASN279 0 0 0 0 0 0 0 0 0 0 9 (271) LYS280 0 0 0 0 0 0 0 0 0 0 21 (274) ARG283 0 0 0 0 0 0 0 0 0 3 12 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4klh_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MATCHED PRODUCT COMPLEX WITH MN2+, 40 S organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) DC(P11):DG(T6) chainA (225) LYS234 0 0 0 0 0 0 0 2 0 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 10 6 (267) ASP276 0 0 0 0 0 0 0 0 0 0 9 (270) ASN279 0 0 0 0 0 0 0 0 0 0 8 (271) LYS280 0 0 0 0 0 0 0 0 0 0 18 (274) ARG283 0 0 0 0 0 0 0 0 0 3 13 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4kli_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MATCHED PRODUCT COMPLEX WITH MG2+, 90 S organism=Homo sapiens DNA sequence DG(T6):DC(P11) DG(T7):DC(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 0 0 3 0 0 0 0 0 0 0 (262) TYR271 7 9 0 0 0 0 0 0 0 0 0 (267) ASP276 10 0 0 0 0 0 0 0 0 0 0 (270) ASN279 8 0 0 0 0 0 0 0 0 0 0 (271) LYS280 21 0 0 0 0 0 0 0 0 0 0 (274) ARG283 12 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4klj_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MATCHED PRODUCT COMPLEX WITH MG2+, 5 MIN organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) DC(P11):DG(T6) chainA (225) LYS234 0 0 0 0 0 0 0 5 0 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 9 7 (267) ASP276 0 0 0 0 0 0 0 0 0 0 9 (270) ASN279 0 0 0 0 0 0 0 0 0 0 8 (271) LYS280 0 0 0 0 0 0 0 0 0 0 23 (274) ARG283 0 0 0 0 0 0 0 0 0 3 12 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4kll_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MATCHED PRODUCT COMPLEX WITH MG2+, 45 MIN organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) DC(P11):DG(T6) chainA (225) LYS234 0 0 0 0 0 0 0 4 0 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 9 7 (267) ASP276 0 0 0 0 0 0 0 0 0 0 7 (270) ASN279 0 0 0 0 0 0 0 0 0 0 9 (271) LYS280 0 0 0 0 0 0 0 0 0 0 21 (274) ARG283 0 0 0 0 0 0 0 0 0 3 12 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4klm_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MATCHED PRODUCT COMPLEX WITH MG2+, 11 H organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) DC(P11):DG(T6) chainA (225) LYS234 0 0 0 0 0 0 0 6 2 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 9 7 (267) ASP276 0 0 0 0 0 0 0 0 0 0 9 (270) ASN279 0 0 0 0 0 0 0 0 0 0 8 (271) LYS280 0 0 0 0 0 0 0 0 0 0 20 (274) ARG283 0 0 0 0 0 0 0 0 0 3 12 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4klo_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MATCHED NICK COMPLEX WITH MG2+ AND PPI, 30 MIN organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) DC(P11):DG(T6) chainA (225) LYS234 0 0 0 0 0 0 0 3 0 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 9 7 (267) ASP276 0 0 0 0 0 0 0 0 0 0 7 (270) ASN279 0 0 0 0 0 0 0 0 0 0 8 (271) LYS280 0 0 0 0 0 0 0 0 0 0 20 (274) ARG283 0 0 0 0 0 0 0 0 0 3 12 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4klq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=OBSERVING A DNA POLYMERASE CHOOSE RIGHT FROM WRONG. organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 23) HIS34 0 0 0 0 36 ( 24) LYS35 0 0 0 0 7 ( 27) ALA38 0 0 0 0 5 prot.sequence nggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4kls_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MISMATCHED REACTANT COMPLEX WITH MN2+, 10 MIN organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 35 ( 26) LYS35 0 0 0 0 7 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpsdekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4klt_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MISMATCHED PRODUCT COMPLEX WITH MN2+, 30 MIN organism=Homo sapiens DNA sequence DG(T7):DC(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (222) LYS234 0 0 6 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsfttkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpsekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirpageplpvdsekdifdyiqwkyrepkdrse >4klu_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MISMATCHED PRODUCT COMPLEX WITH MN2+, 15 H organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) chainA (222) LYS234 0 0 0 0 0 0 0 0 1 0 prot.sequence lnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskdekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4kny_AB:CheY-like; title=CRYSTAL STRUCTURE OF THE RESPONSE REGULATOR KDPE COMPLEXED TO DNA IN AN ACTIVE-LIKE CONFORMATION organism=Escherichia coli DNA sequence DC(Y1):DG(Z30) DA(Y2):DT(Z29) DT(Y3):DA(Z28) DT(Y4):DA(Z27) DT(Y5):DA(Z26) DT(Y6):DA(Z25) DT(Y7):DA(Z24) DA(Y8):DT(Z23) DT(Y9):DA(Z22) DA(Y10):DT(Z21) DC(Y11):DG(Z20) DT(Y12):DA(Z19) DT(Y13):DA(Z18) DT(Y14):DA(Z17) DT(Y15):DA(Z16) DT(Y16):DA(Z15) DT(Y17):DA(Z14) DT(Y18):DA(Z13) DA(Y19):DT(Z12) DC(Y20):DG(Z11) DA(Y21):DT(Z10) DC(Y22):DG(Z9) DC(Y23):DG(Z8) DC(Y24):DG(Z7) chainA (187) HIS190 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) TYR191 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) ARG193 0 0 0 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) ILE194 0 0 0 0 0 4 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) TYR195 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (191) HIS190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 4 3 0 0 0 0 (194) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 0 0 0 (195) ILE194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 (196) TYR195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence amanvlivedeqairrflrtalegdgmrvfeaetlqrglleaatrkpdliildlglpdgdgiefirdlrqwsavpvivlsarseesdkiaaldagaddylskpfgigelqarlrvalrrhapdplvkfsdvtvdlaarvihrgeeevhltpiefrllavllnnagkvltqrqllnqvwgpnavehsHYlRIYmghlrqkleqdparprhfitetgigyrfml/amanvlivedeqairrflrtalegdgmrvfeaetlqrglleaatrkpdliildlglpdgdgiefirdlrqwsavpvivlsarseesdkiaaldagaddylskpfgigelqarlrvalrrhsattapdplvkfsdvtvdlaarvihrgeeevhltpiefrllavllnnagkvltqrqllnqvwgpnavehsHylRIYmghlrqkleqdparprhfitetgigyrfml >4kny_B:CheY-like; title=CRYSTAL STRUCTURE OF THE RESPONSE REGULATOR KDPE COMPLEXED TO DNA IN AN ACTIVE-LIKE CONFORMATION organism=Escherichia coli DNA sequence DG(Z7):DC(Y24) DG(Z8):DC(Y23) DG(Z9):DC(Y22) DT(Z10):DA(Y21) DG(Z11):DC(Y20) DT(Z12):DA(Y19) DA(Z13):DT(Y18) DA(Z14):DT(Y17) DA(Z15):DT(Y16) DA(Z16):DT(Y15) DA(Z17):DT(Y14) DA(Z18):DT(Y13) DA(Z19):DT(Y12) DG(Z20):DC(Y11) DT(Z21):DA(Y10) DA(Z22):DT(Y9) DT(Z23):DA(Y8) DA(Z24):DT(Y7) DA(Z25):DT(Y6) DA(Z26):DT(Y5) DA(Z27):DT(Y4) DA(Z28):DT(Y3) DT(Z29):DA(Y2) DG(Z30):DC(Y1) chainB (191) HIS190 0 0 0 0 3 4 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) ARG193 0 0 0 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) ILE194 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) TYR195 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence amanvlivedeqairrflrtalegdgmrvfeaetlqrglleaatrkpdliildlglpdgdgiefirdlrqwsavpvivlsarseesdkiaaldagaddylskpfgigelqarlrvalrrhsattapdplvkfsdvtvdlaarvihrgeeevhltpiefrllavllnnagkvltqrqllnqvwgpnavehsHylRIYmghlrqkleqdparprhfitetgigyrfml >4koe_ABCD:Type_II_DNA_topoisomerase; title=QUINOLONE(TROVAFLOXACIN)-DNA CLEAVAGE COMPLEX OF TYPE IV TOPOISOMERASE FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE SEROTYPE 4 DNA sequence DC(G9):DG(H11) DG(G10):DC(H10) DT(G11):DA(H9) DG(G12):DC(H8) DC(G13):DG(H7) DA(G14):DT(H6) DT(G15):DA(H5) DA(F1):DT(H4) DG(F2):DC(H3) DT(F3):DA(H2) DC(F4):DG(H1) DA(F5):DT(E15) DT(F6):DA(E14) DT(F7):DA(E13) DC(F8):DG(E12) DA(F9):DT(E11) DT(F10):DA(E10) DG(F11):DC(E9) chainA ( 18) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 78) SER80 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (115) ARG117 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (168) ILE170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 16 0 0 chainB ( 26) ARG28 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) SER80 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (115) ARG117 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (168) ILE170 0 0 16 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 44) LYS458 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 chainD ( 44) LYS458 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqnmsledimgerfgrYskyiiqdralpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykayawtdgeleelrklqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykyawtdgeleelrkqqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >4koe_B:Type_II_DNA_topoisomerase; title=QUINOLONE(TROVAFLOXACIN)-DNA CLEAVAGE COMPLEX OF TYPE IV TOPOISOMERASE FROM S. PNEUMONIAE organism=? DNA sequence DC(G9):DG(H11) DG(G10):DC(H10) DT(G11):DA(H9) DG(G12):DC(H8) DC(G13):DG(H7) DA(G14):DT(H6) DT(G15):DA(H5) DA(F1):DT(H4) DG(F2):DC(H3) DT(F3):DA(H2) DC(F4):DG(H1) DA(F5):DT(E15) DT(F6):DA(E14) DT(F7):DA(E13) DC(F8):DG(E12) DA(F9):DT(E11) DT(F10):DA(E10) DG(F11):DC(E9) chainB ( 26) ARG28 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) SER80 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (115) ARG117 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (168) ILE170 0 0 16 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled >4kpe_ABCD:Type_II_DNA_topoisomerase; title=NOVEL FLUOROQUINOLONES IN COMPLEX WITH TOPOISOMERASE IV FROM S. PNEUMONIAE AND E-SITE G-GATE organism=STREPTOCOCCUS PNEUMONIAE / STREPTOCOCCUS PNEUMONIAE SEROTYPE 4 DNA sequence DC(E9):DG(F11) DA(E10):DT(F10) DT(E11):DA(F9) DG(E12):DC(F8) DA(E13):DT(F7) DA(E14):DT(F6) DT(E15):DA(F5) DG(H1):DC(F4) DA(H2):DT(F3) DC(H3):DG(F2) DT(H4):DA(F1) DA(H5):DT(G15) DT(H6):DA(G14) DG(H7):DC(G13) DC(H8):DG(G12) DA(H9):DT(G11) DC(H10):DG(G10) DG(H11):DC(G9) chainA ( 78) SER80 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (115) ARG117 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (168) ILE170 0 0 19 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 78) SER80 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (115) ARG117 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (168) ILE170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 17 0 0 chainC ( 44) LYS458 0 0 0 0 3 7 2 0 0 0 0 0 0 0 0 0 0 0 chainD ( 44) LYS458 0 0 0 0 0 0 0 0 0 0 0 2 8 2 0 0 0 0 prot.sequence niqnmsledimgerfgrYskyiiqdralpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykayawtdgeleelrklqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmayawtdgeleelrkqlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >4kpe_C:Type_II_DNA_topoisomerase; title=NOVEL FLUOROQUINOLONES IN COMPLEX WITH TOPOISOMERASE IV FROM S. PNEUMONIAE AND E-SITE G-GATE organism=? DNA sequence DC(G9):DG(H11) DG(G10):DC(H10) DT(G11):DA(H9) DG(G12):DC(H8) DC(G13):DG(H7) DA(G14):DT(H6) DT(G15):DA(H5) DA(F1):DT(H4) DG(F2):DC(H3) DT(F3):DA(H2) DC(F4):DG(H1) DA(F5):DT(E15) DT(F6):DA(E14) DT(F7):DA(E13) DC(F8):DG(E12) DA(F9):DT(E11) DT(F10):DA(E10) DG(F11):DC(E9) chainC ( 44) LYS458 0 0 0 0 0 0 0 0 0 0 0 2 7 3 0 0 0 0 prot.sequence kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykayawtdgeleelrklqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >4kpf_AC:Type_II_DNA_topoisomerase; title=NOVEL FLUOROQUINOLONES IN COMPLEX WITH TOPOISOMERASE IV FROM S. PNEUMONIAE AND E-SITE G-GATE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(E9):DG(F11) DA(E10):DT(F10) DT(E11):DA(F9) DG(E12):DC(F8) DA(E13):DT(F7) DA(E14):DT(F6) DT(E15):DA(F5) chainA ( 78) SER80 0 0 0 0 0 2 1 (168) ILE170 0 0 19 19 0 0 0 chainC ( 44) LYS458 0 0 0 0 3 7 2 prot.sequence niqnmsledimgerfgrYskyiiqdralpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykayawtdgeleelrklqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >4kpf_BD:Type_II_DNA_topoisomerase; title=NOVEL FLUOROQUINOLONES IN COMPLEX WITH TOPOISOMERASE IV FROM S. PNEUMONIAE AND E-SITE G-GATE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(G9):DG(H11) DG(G10):DC(H10) DT(G11):DA(H9) DG(G12):DC(H8) DC(G13):DG(H7) DA(G14):DT(H6) DT(G15):DA(H5) chainB ( 26) ARG28 0 0 0 0 1 0 0 ( 78) SER80 0 0 0 0 0 2 1 (168) ILE170 0 0 17 17 0 0 0 chainD ( 44) LYS458 0 0 0 0 1 8 2 prot.sequence niqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmayawtdgeleelrkqlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >4kpf_D:Type_II_DNA_topoisomerase; title=NOVEL FLUOROQUINOLONES IN COMPLEX WITH TOPOISOMERASE IV FROM S. PNEUMONIAE AND E-SITE G-GATE organism=? DNA sequence DC(G9):DG(H11) DG(G10):DC(H10) DT(G11):DA(H9) DG(G12):DC(H8) DC(G13):DG(H7) DA(G14):DT(H6) DT(G15):DA(H5) chainD ( 44) LYS458 0 0 0 0 1 8 2 prot.sequence kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmayawtdgeleelrkqlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkft >4kpy_B:Ribonuclease_H-like; title=DNA BINDING PROTEIN AND DNA COMPLEX STRUCTURE organism=Thermus thermophilus DNA sequence DG(E2):DC(F18) DA(E3):DT(F17) DG(E4):DC(F16) DG(E5):DC(F15) DT(E6):DA(F14) DA(E7):DT(F13) DG(E8):DC(F12) DT(E9):DA(F11) DA(E10):DT(F10) DG(E11):DC(M9) DG(E12):DC(M8) DT(E13):DA(M7) DT(E14):DA(M6) DG(E15):DC(M5) DT(E16):DA(M4) chainB ( 41) TYR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 ( 42) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 ( 45) ALA47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 57) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (259) LEU267 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 (435) HIS445 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (436) ARG446 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) ASN449 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (538) ARG548 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (600) PHE610 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 (601) ARG611 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (605) ARG615 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 (637) PHE647 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hlgktevflnrfalrplnpeelrpwrlevvldpppgreevYPllAqvarraggvtvRmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpkelpgglslldyhaskgrlqgreggrvawvadpkpiphltgllvpvltLedlheeelalslpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppmawedrnrlkalllreglpsqilnvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavggdgghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrdgRvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrdFRgtpRplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >4ktq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM T. AQUATICUS BOUND TO A PRIMER/TEMPLATE DNA organism=Thermus aquaticus DNA sequence DG(C205):DOC(B112) DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 0 6 5 0 0 0 0 0 0 0 (280) ARG573 9 3 0 0 0 0 0 0 0 0 0 0 (290) ASN583 0 1 4 0 0 0 0 0 0 0 0 0 (322) GLU615 1 0 0 0 0 0 0 0 0 0 0 0 (378) TYR671 2 0 0 0 0 0 0 0 0 0 0 0 (457) ASN750 2 0 0 0 0 0 0 0 0 0 0 0 (461) GLN754 6 0 0 0 0 0 0 0 0 0 0 0 (491) HIS784 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlkstyidplpdlihprtgrlhtrfnqtatatgRlsssdpnlqNipvrtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlYgmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4kud_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF N-TERMINAL ACETYLATED SIR3 BAH DOMAIN D205N MUTANT IN COMPLEX WITH YEAST NUCLEOSOME CORE PARTICLE organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 31) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 20) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 64) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRykpgtvalreirrfqkstellirkLpfqrlvreiaqdfktdlRfqssaigalqesveaylvslfedtnlaaihakrvtiqkkdiklarrlrge/akrhrkilrdniqgitkpairrlarrggvkRisgliyeevravlksflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfgg/qsrsakagltfpvgrvhrllrrgnyaqrigSgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihqnllp/ketyssyiykvlkqthpdtgisqksmsilnSfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkyssstq/kkphRykpgtvalreirrfqkstellirkLpfqrlvreiaqdfktdlRfqssaigalqesveaylvslfedtnlaaihakrvtiqkkdiklarrlrge/ggakrhrkilrdniqgitkPairrlarrggvkrisgliyeevravlksflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfgg/sqsrsakagltfpvgrvhrllrrgnyaqrigsgapvyltavleylaaeilelagnaardnkktRiiprhlqlairnddelnkllgnvtiaqggvlpnihqnllpk/rketyssyiykvlkqthpdtgisqksmsilnsfvndiferiateasklaaynkkstisareiqTavrlilpgelakhavsegtravtkyssstq >4l0y_A:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF RUNX1 AND ETS1 BOUND TO TCR ALPHA PROMOTER (CRYSTAL FORM 1) organism=MUS MUSCULUS DNA sequence DG(C2):DC(D116) DA(C3):DT(D115) DA(C4):DT(D114) DG(C5):DC(D113) DC(C6):DG(D112) DC(C7):DG(D111) DA(C8):DT(D110) DC(C9):DG(D109) DA(C10):DT(D108) DT(C11):DA(D107) DC(C12):DG(D106) DC(C13):DG(D105) DT(C14):DA(D104) DC(C15):DG(D103) DT(C16):DA(D102) chainA ( 31) ARG80 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 ( 93) ARG142 1 8 7 0 0 0 0 0 0 0 0 0 0 0 0 (121) VAL170 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (122) ASP171 0 0 0 1 9 5 0 0 0 0 0 0 0 0 0 (125) ARG174 0 0 0 0 2 13 12 0 0 0 0 0 0 0 0 (128) ARG177 0 0 0 4 10 11 0 0 0 0 0 0 0 0 0 prot.sequence smvevladhpgelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepR >4l0y_AB:p53-like_transcription_factors;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF RUNX1 AND ETS1 BOUND TO TCR ALPHA PROMOTER (CRYSTAL FORM 1) organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DA(D102):DT(C16) DG(D103):DC(C15) DA(D104):DT(C14) DG(D105):DC(C13) DG(D106):DC(C12) DA(D107):DT(C11) DT(D108):DA(C10) DG(D109):DC(C9) DT(D110):DA(C8) DG(D111):DC(C7) DG(D112):DC(C6) DC(D113):DG(C5) DT(D114):DA(C4) DT(D115):DA(C3) DC(D116):DG(C2) chainA ( 31) ARG80 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 ( 93) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 7 8 1 (121) VAL170 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (122) ASP171 0 0 0 0 0 0 0 0 0 5 9 1 0 0 0 (125) ARG174 0 0 0 0 0 0 0 0 12 13 2 0 0 0 0 (128) ARG177 0 0 0 0 0 0 0 0 0 11 10 4 0 0 0 chainB ( 55) LYS388 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 58) ARG391 0 0 0 20 16 8 0 0 0 0 0 0 0 0 0 ( 61) ARG394 0 0 12 12 0 0 0 0 0 0 0 0 0 0 0 ( 62) TYR395 0 0 0 0 0 4 5 7 0 0 0 0 0 0 0 prot.sequence smvevladhpgelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepR/piqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkp >4l0z_AB:p53-like_transcription_factors;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF RUNX1 AND ETS1 BOUND TO TCR ALPHA PROMOTER (CRYSTAL FORM 2) organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DG(C2):DC(D116) DA(C3):DT(D115) DA(C4):DT(D114) DG(C5):DC(D113) DC(C6):DG(D112) DC(C7):DG(D111) DA(C8):DT(D110) DC(C9):DG(D109) DA(C10):DT(D108) DT(C11):DA(D107) DC(C12):DG(D106) DC(C13):DG(D105) DT(C14):DA(D104) DC(C15):DG(D103) DT(C16):DA(D102) chainA ( 27) ARG80 0 0 0 0 0 0 0 10 10 0 0 0 0 0 0 ( 89) ARG142 2 11 6 0 0 0 0 0 0 0 0 0 0 0 0 (117) VAL170 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (118) ASP171 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 (121) ARG174 0 0 0 0 2 14 16 0 0 0 0 0 0 0 0 (124) ARG177 0 0 0 7 10 13 0 0 0 0 0 0 0 0 0 chainB ( 56) GLU387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 57) LYS388 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 60) ARG391 0 0 0 0 0 0 0 0 0 5 20 25 0 0 0 ( 63) ARG394 0 0 0 0 0 0 0 0 0 0 0 13 11 1 0 ( 64) TYR395 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 prot.sequence vladhpgelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepRgslsfserlseleqlrrtamrvs/sgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelham >4l0z_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF RUNX1 AND ETS1 BOUND TO TCR ALPHA PROMOTER (CRYSTAL FORM 2) organism=HOMO SAPIENS DNA sequence DG(C2):DC(D116) DA(C3):DT(D115) DA(C4):DT(D114) DG(C5):DC(D113) DC(C6):DG(D112) DC(C7):DG(D111) DA(C8):DT(D110) DC(C9):DG(D109) DA(C10):DT(D108) DT(C11):DA(D107) DC(C12):DG(D106) DC(C13):DG(D105) DT(C14):DA(D104) DC(C15):DG(D103) DT(C16):DA(D102) chainB ( 56) GLU387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 57) LYS388 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 60) ARG391 0 0 0 0 0 0 0 0 0 5 20 25 0 0 0 ( 63) ARG394 0 0 0 0 0 0 0 0 0 0 0 13 11 1 0 ( 64) TYR395 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 prot.sequence sgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelham >4l18_AB:"Winged_helix"_DNA-binding_domain;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF RUNX1 AND ETS1 BOUND TO TCR ALPHA PROMOTER (CRYSTAL FORM 3) organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DG(C2):DC(D116) DA(C3):DT(D115) DA(C4):DT(D114) DG(C5):DC(D113) DC(C6):DG(D112) DC(C7):DG(D111) DA(C8):DT(D110) DC(C9):DG(D109) DA(C10):DT(D108) DT(C11):DA(D107) DC(C12):DG(D106) DC(C13):DG(D105) DT(C14):DA(D104) DC(C15):DG(D103) DT(C16):DA(D102) chainA ( 28) ARG80 0 0 0 0 0 0 0 10 12 0 0 0 0 0 0 ( 90) ARG142 4 12 6 0 0 0 0 0 0 0 0 0 0 0 0 (118) VAL170 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (119) ASP171 0 0 0 0 9 7 1 0 0 0 0 0 0 0 0 (122) ARG174 0 0 0 0 2 14 14 0 0 0 0 0 0 0 0 (125) ARG177 0 0 0 4 9 11 0 0 0 0 0 0 0 0 0 chainB ( 56) LYS388 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 ( 59) ARG391 0 0 0 0 0 0 0 0 0 9 19 24 0 0 0 ( 62) ARG394 0 0 0 0 0 0 0 0 0 0 0 11 15 3 0 ( 63) TYR395 0 0 0 0 0 0 0 2 6 4 0 0 0 0 0 prot.sequence evladhpgelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepRpgslsfserlseleqlr/gpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkpda >4l18_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF RUNX1 AND ETS1 BOUND TO TCR ALPHA PROMOTER (CRYSTAL FORM 3) organism=HOMO SAPIENS DNA sequence DA(D102):DT(C16) DG(D103):DC(C15) DA(D104):DT(C14) DG(D105):DC(C13) DG(D106):DC(C12) DA(D107):DT(C11) DT(D108):DA(C10) DG(D109):DC(C9) DT(D110):DA(C8) DG(D111):DC(C7) DG(D112):DC(C6) DC(D113):DG(C5) DT(D114):DA(C4) DT(D115):DA(C3) DC(D116):DG(C2) chainB ( 56) LYS388 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 59) ARG391 0 0 0 24 19 9 0 0 0 0 0 0 0 0 0 ( 62) ARG394 0 3 15 11 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR395 0 0 0 0 0 4 6 2 0 0 0 0 0 0 0 prot.sequence gpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkpda >4l18_E:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF RUNX1 AND ETS1 BOUND TO TCR ALPHA PROMOTER (CRYSTAL FORM 3) organism=MUS MUSCULUS DNA sequence DA(H302):DT(G216) DG(H303):DC(G215) DA(H304):DT(G214) DG(H305):DC(G213) DG(H306):DC(G212) DA(H307):DT(G211) DT(H308):DA(G210) DG(H309):DC(G209) DT(H310):DA(G208) DG(H311):DC(G207) DG(H312):DC(G206) DC(H313):DG(G205) DT(H314):DA(G204) DT(H315):DA(G203) DC(H316):DG(G202) chainE ( 29) ARG80 0 0 0 0 0 0 11 13 0 0 0 0 0 0 0 ( 91) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 9 8 2 (119) VAL170 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (120) ASP171 0 0 0 0 0 0 0 0 1 7 9 1 0 0 0 (123) ARG174 0 0 0 0 0 0 0 0 15 13 2 0 0 0 0 (126) ARG177 0 0 0 0 0 0 0 0 0 14 10 4 0 0 0 prot.sequence vevladhpgelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepRgslsfserlseleql >4l18_EF:"Winged_helix"_DNA-binding_domain;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF RUNX1 AND ETS1 BOUND TO TCR ALPHA PROMOTER (CRYSTAL FORM 3) organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DG(G202):DC(H316) DA(G203):DT(H315) DA(G204):DT(H314) DG(G205):DC(H313) DC(G206):DG(H312) DC(G207):DG(H311) DA(G208):DT(H310) DC(G209):DG(H309) DA(G210):DT(H308) DT(G211):DA(H307) DC(G212):DG(H306) DC(G213):DG(H305) DT(G214):DA(H304) DC(G215):DG(H303) DT(G216):DA(H302) chainE ( 29) ARG80 0 0 0 0 0 0 0 13 11 0 0 0 0 0 0 ( 91) ARG142 2 8 9 0 0 0 0 0 0 0 0 0 0 0 0 (119) VAL170 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (120) ASP171 0 0 0 1 9 7 1 0 0 0 0 0 0 0 0 (123) ARG174 0 0 0 0 2 13 15 0 0 0 0 0 0 0 0 (126) ARG177 0 0 0 4 10 14 0 0 0 0 0 0 0 0 0 chainF ( 57) LYS388 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 60) ARG391 0 0 0 0 0 0 0 0 0 9 18 23 0 0 0 ( 63) ARG394 0 0 0 0 0 0 0 0 0 0 0 13 11 1 0 ( 64) TYR395 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 prot.sequence vevladhpgelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepRgslsfserlseleql/sgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkp >4l5r_C:HIN-2000_domain-like; title=CRYSTAL STRUCTURE OF P202 HIN1 IN COMPLEX WITH 20-MER DSDNA organism=MUS MUSCULUS DNA sequence DG(A1):DC(B18) DC(A2):DG(B17) DG(A3):DC(B16) DA(A4):DT(B15) DT(A5):DA(B14) DG(A6):DC(B13) DG(A7):DC(B12) DT(A8):DA(B11) DT(A9):DA(B10) DA(A10):DT(B9) DA(A11):DT(B8) DC(A12):DG(B7) DC(A13):DG(B6) DA(A14):DT(B5) DT(A15):DA(B4) DC(A16):DG(B3) DG(A17):DC(B2) DC(A18):DG(B1) chainC ( 8) LYS53 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ARG224 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 prot.sequence tpkknisKgavlhekpmtvmvltatepfnykegkenmfhatvateskyyrvkvfnmdlkekftenqfitiskyfnssgileinetatvseaapnqmfevpkniirsaketlkiskikeldsgtliygvfavekkkvndksitfkikdnednikvvwdkeqhninyekgdklqlfsfhlRkgngkpilhsgnhsfikge >4l5s_A:HIN-2000_domain-like; title=P202 HIN1 IN COMPLEX WITH 12-MER DSDNA organism=? DNA sequence DG(I1):DC(H10) DC(I2):DG(H9) DG(I3):DC(H8) DA(I4):DT(H7) DT(I5):DA(H6) DA(I6):DT(H5) DT(I7):DA(H4) DC(I8):DG(H3) DG(I9):DC(H2) DC(I10):DG(H1) chainA ( 28) PRO72 0 0 0 0 0 0 0 0 0 14 ( 37) ASN81 0 0 0 0 0 0 0 0 0 3 ( 57) MET101 0 0 0 0 0 0 0 0 0 4 ( 60) LYS104 0 0 0 0 0 0 0 0 0 17 ( 61) GLU105 0 0 0 0 0 0 0 0 0 1 prot.sequence stpkkniskgavlhekpmtvmvltatePfnykegkeNmfhatvateskyyrvkvfnMdlKEkftenqfitiskyfnssgileinetatvseaapnqmfevpkniirsaketlkiskikeldsgtliygvfavekkkvndksitfkikdnednikvvwdkeqhninyekgdklqlfsfhlrkgngkpilhsgnhsfikge >4l62_ABCD:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA TRANSCRIPTIONAL REGULATOR PA2196 BOUND TO ITS OPERATOR DNA organism=Pseudomonas aeruginosa DNA sequence DT(R1):DA(Q25) DG(R2):DC(Q24) DA(R3):DT(Q23) DA(R4):DT(Q22) DT(R5):DA(Q21) DT(R6):DA(Q20) DA(R7):DT(Q19) DG(R8):DC(Q18) DA(R9):DT(Q17) DC(R10):DG(Q16) DC(R11):DG(Q15) DA(R12):DT(Q14) DG(R13):DC(Q13) DT(R14):DA(Q12) DC(R15):DG(Q11) DG(R16):DC(Q10) DT(R17):DA(Q9) DC(R18):DG(Q8) DT(R19):DA(Q7) DA(R20):DT(Q6) DG(R21):DC(Q5) DA(R22):DT(Q4) DA(R23):DT(Q3) DA(R24):DT(Q2) DC(R25):DG(Q1) chainA ( 27) LEU30 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS41 0 0 0 0 0 0 0 0 3 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR45 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) HIS46 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ASN31 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 34) PRO40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 35) LYS41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 15 5 2 0 0 0 0 0 0 0 ( 37) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 39) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 ( 40) HIS46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 chainC ( 27) LEU30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 28) ASN31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 42) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 chainD ( 34) PRO40 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS41 0 0 0 0 0 0 0 0 0 0 1 3 13 6 0 0 0 0 0 0 0 0 0 0 0 ( 37) SER43 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR45 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS46 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence syddtrqhlldtgyrimavkgfsgvgLneilqsagvpKgSfYHyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle/dtrqhlldtgyrimavkgfsgvglNeilqsagvPKgSfYHyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle/syddtrqhlldtgyrimavkgfsgvgLNeilqsagvpkgSfYhyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle/dtrqhlldtgyrimavkgfsgvglneilqsagvPKgSfYHyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle >4l62_EFGH:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA TRANSCRIPTIONAL REGULATOR PA2196 BOUND TO ITS OPERATOR DNA organism=Pseudomonas aeruginosa DNA sequence DG(S1):DC(T25) DT(S2):DA(T24) DT(S3):DA(T23) DT(S4):DA(T22) DC(S5):DG(T21) DT(S6):DA(T20) DA(S7):DT(T19) DG(S8):DC(T18) DA(S9):DT(T17) DC(S10):DG(T16) DG(S11):DC(T15) DA(S12):DT(T14) DC(S13):DG(T13) DT(S14):DA(T12) DG(S15):DC(T11) DG(S16):DC(T10) DT(S17):DA(T9) DC(S18):DG(T8) DT(S19):DA(T7) DA(S20):DT(T6) DA(S21):DT(T5) DT(S22):DA(T4) DT(S23):DA(T3) DC(S24):DG(T2) DA(S25):DT(T1) chainE ( 27) LEU30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 38) LYS41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 42) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 6 0 0 0 0 0 0 0 ( 43) HIS46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 chainF ( 25) ASN31 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) PRO40 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS41 0 0 0 0 0 0 0 2 4 15 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) SER43 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR45 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS46 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 34) PRO40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 35) LYS41 0 0 0 0 0 0 0 0 0 0 0 3 15 6 1 0 0 0 0 0 0 0 0 0 0 ( 37) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 39) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 chainH ( 27) LEU30 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASN31 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR45 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence syddtrqhlldtgyrimavkgfsgvgLneilqsagvpKgSfYHyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle/dtrqhlldtgyrimavkgfsgvglNeilqsagvPKgSfYHyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle/dtrqhlldtgyrimavkgfsgvglNeilqsagvPKgSfYHyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle/syddtrqhlldtgyrimavkgfsgvgLNeilqsagvpkgsfYhyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle >4l62_IJKL:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA TRANSCRIPTIONAL REGULATOR PA2196 BOUND TO ITS OPERATOR DNA organism=Pseudomonas aeruginosa DNA sequence DG(U1):DC(V25) DT(U2):DA(V24) DT(U3):DA(V23) DT(U4):DA(V22) DC(U5):DG(V21) DT(U6):DA(V20) DA(U7):DT(V19) DG(U8):DC(V18) DA(U9):DT(V17) DC(U10):DG(V16) DG(U11):DC(V15) DA(U12):DT(V14) DC(U13):DG(V13) DT(U14):DA(V12) DG(U15):DC(V11) DG(U16):DC(V10) DT(U17):DA(V9) DC(U18):DG(V8) DT(U19):DA(V7) DA(U20):DT(V6) DA(U21):DT(V5) DT(U22):DA(V4) DT(U23):DA(V3) DC(U24):DG(V2) DA(U25):DT(V1) chainI ( 38) LYS41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 2 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 42) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 6 0 0 0 0 0 0 0 ( 43) HIS46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 chainJ ( 25) ASN31 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) PRO40 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS41 0 0 0 0 0 0 0 1 4 17 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) SER43 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR45 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS46 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 27) LEU30 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASN31 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR45 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 34) PRO40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 35) LYS41 0 0 0 0 0 0 0 0 0 0 0 4 16 3 1 0 0 0 0 0 0 0 0 0 0 ( 37) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 ( 39) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence syddtrqhlldtgyrimavkgfsgvglneilqsagvpKgSfYHyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle/dtrqhlldtgyrimavkgfsgvglNeilqsagvPKgSfYHyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle/syddtrqhlldtgyrimavkgfsgvgLNeilqsagvpkgSfYhyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle/dtrqhlldtgyrimavkgfsgvglneilqsagvPKgSfYHyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle >4l62_M:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA TRANSCRIPTIONAL REGULATOR PA2196 BOUND TO ITS OPERATOR DNA organism=Pseudomonas aeruginosa DNA sequence DT(X1):DA(W25) DG(X2):DC(W24) DA(X3):DT(W23) DA(X4):DT(W22) DT(X5):DA(W21) DT(X6):DA(W20) DA(X7):DT(W19) DG(X8):DC(W18) DA(X9):DT(W17) DC(X10):DG(W16) DC(X11):DG(W15) DA(X12):DT(W14) DG(X13):DC(W13) DT(X14):DA(W12) DC(X15):DG(W11) DG(X16):DC(W10) DT(X17):DA(W9) DC(X18):DG(W8) DT(X19):DA(W7) DA(X20):DT(W6) DG(X21):DC(W5) DA(X22):DT(W4) DA(X23):DT(W3) DA(X24):DT(W2) DC(X25):DG(W1) chainM ( 27) LEU30 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS41 0 0 0 0 0 0 0 0 3 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR45 0 0 0 0 0 0 0 7 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) HIS46 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence syddtrqhlldtgyrimavkgfsgvgLneilqsagvpKgSfYHyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle >4l62_MNOP:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA TRANSCRIPTIONAL REGULATOR PA2196 BOUND TO ITS OPERATOR DNA organism=Pseudomonas aeruginosa DNA sequence DG(W1):DC(X25) DT(W2):DA(X24) DT(W3):DA(X23) DT(W4):DA(X22) DC(W5):DG(X21) DT(W6):DA(X20) DA(W7):DT(X19) DG(W8):DC(X18) DA(W9):DT(X17) DC(W10):DG(X16) DG(W11):DC(X15) DA(W12):DT(X14) DC(W13):DG(X13) DT(W14):DA(X12) DG(W15):DC(X11) DG(W16):DC(X10) DT(W17):DA(X9) DC(W18):DG(X8) DT(W19):DA(X7) DA(W20):DT(X6) DA(W21):DT(X5) DT(W22):DA(X4) DT(W23):DA(X3) DC(W24):DG(X2) DA(W25):DT(X1) chainM ( 27) LEU30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 38) LYS41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 42) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 7 0 0 0 0 0 0 0 ( 43) HIS46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 chainN ( 34) PRO40 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS41 0 0 0 0 0 0 0 2 5 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) SER43 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR45 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS46 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 27) LEU30 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASN31 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR45 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 34) PRO40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 35) LYS41 0 0 0 0 0 0 0 0 0 0 0 7 16 4 1 0 0 0 0 0 0 0 0 0 0 ( 37) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 39) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence syddtrqhlldtgyrimavkgfsgvgLneilqsagvpKgSfYHyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle/dtrqhlldtgyrimavkgfsgvglneilqsagvPKgSfYHyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle/syddtrqhlldtgyrimavkgfsgvgLNeilqsagvpkgSfYhyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle/dtrqhlldtgyrimavkgfsgvglneilqsagvPKgSfYHyfkskeqfgqalledyfrvyladmdqrfsapglnarerlmsywqkwldnacppcdeqrclvvklsaevadlsesmritlrdgsdgiierlvgclgqgrddgslapcdarhmasalyqlwlgasllsklhrspgpletamqttrslle >4lb5_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PKZ ZALPHA IN COMPLEX WITH DS(CG)6 (HEXAGONAL FORM) organism=Danio rerio DNA sequence DT(C0) DC(C1) DG(C2) DC(C3) DG(C4) DC(C5) DG(C6) DC(C7) DG(C8) DC(C9) DG(C10) DC(C11) DG(C12) chainA ( 37) TYR45 0 0 0 0 14 0 0 0 0 0 0 0 0 chainB ( 39) TYR45 0 0 0 0 0 0 0 0 15 0 0 0 0 prot.sequence eiemricdylrrhgrstvqdifkelkleKstvnrhlYslqaskqvfktvkrpvwnlv/eneiemricdylrrhgrstvqdifkelkleKstvnrhlYslqaskqvfktvednkrpvwnlve >4lb5_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PKZ ZALPHA IN COMPLEX WITH DS(CG)6 (HEXAGONAL FORM) organism=Danio rerio DNA sequence DT(C0) DC(C1) DG(C2) DC(C3) DG(C4) DC(C5) DG(C6) DC(C7) DG(C8) DC(C9) DG(C10) DC(C11) DG(C12) chainB ( 39) TYR45 0 0 0 0 0 0 0 0 15 0 0 0 0 prot.sequence eneiemricdylrrhgrstvqdifkelkleKstvnrhlYslqaskqvfktvednkrpvwnlve >4ld0_B:Ribonuclease_H-like; title=T. THERMOPHILUS RUVC IN COMPLEX WITH HOLLIDAY JUNCTION SUBSTRATE organism=Thermus thermophilus DNA sequence DA(C2):DT(F32) DA(C3):DT(F31) DT(C4):DA(F30) DC(C5):DG(F29) DG(C6):DC(F28) DG(C7):DC(F27) DC(C8):DG(F26) DT(C9):DA(F25) DT(C10):DA(F24) DT(C11):DA(F23) DG(C12):DG(F22) chainB ( 70) PHE74 0 0 0 0 0 0 0 0 6 0 0 ( 72) ARG76 0 0 0 0 0 0 0 5 0 0 0 ( 73) GLN77 0 0 0 0 0 0 5 3 0 0 0 ( 76) LEU80 0 0 0 0 0 0 0 2 0 0 0 prot.sequence hmvvagidpgithlglgvvavlkarllhgevvktspqepakervgriharvlevlhrfrpeavavqeqfFyRQneLaykvgwalgavlvaafeagvpvyaygpmqvkqalaakeevalmvrgilglkeaprpshladalaialthafyarmgtakpl >4ld9_A:Histone-fold; title=CRYSTAL STRUCTURE OF THE N-TERMINALLY ACETYLATED BAH DOMAIN OF SIR3 BOUND TO THE NUCLEOSOME CORE PARTICLE organism=XENOPUS LAEVIS DNA sequence DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) HIS39 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHrYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge >4ld9_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE N-TERMINALLY ACETYLATED BAH DOMAIN OF SIR3 BOUND TO THE NUCLEOSOME CORE PARTICLE organism=XENOPUS LAEVIS DNA sequence DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) HIS39 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 58) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE chainF chainG ( 18) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence kpHrYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/kgGaKrhrkvlrdniqgitkpairrlarRggvkrisgliyeetrgvLkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/raglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/yaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreIqtavrlllpgelakhavsegtkavtkyt/gtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylVglfedtnlcaihakrvtimpkdiqlarrirge/hrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtyteHakrktvtamdvvyalkrqgrtlygf/ssraglqfpvgrvhrllRkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/kesyaiyvykvlkqvhpDtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtky >4ldx_A:DNA-binding_pseudobarrel_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF ARABIDOPSIS THALIANA AUXIN RESPONSE FACTOR 1 (ARF1) IN COMPLEX WITH PROTOMOR-LIKE SEQUENCE ER7 organism=Arabidopsis thaliana DNA sequence DT(C1):DA(D21) DT(C2):DA(D20) DG(C3):DC(D19) DT(C4):DA(D18) DC(C5):DG(D17) DT(C6):DA(D16) DC(C7):DG(D15) DC(C8):DG(D14) DC(C9):DG(D13) DT(C10):DA(D12) DT(C11):DA(D11) DT(C12):DA(D10) DG(C13):DC(D9) DG(C14):DC(D8) DG(C15):DC(D7) DA(C16):DT(D6) DG(C17):DC(D5) DA(C18):DT(D4) DC(C19):DG(D3) DA(C20):DT(D2) DA(C21):DT(D1) chainA (116) SER131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 (121) HIS136 0 0 0 0 0 0 0 0 0 0 0 0 10 11 7 0 0 0 0 0 0 (166) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 (169) PRO184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 6 (171) ARG186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 19 0 prot.sequence sdalcrelwhacagplvtlpregervyyfpeghmeqleasmhqgleqqmpsfnlpskilckviniqrraepetdevyaqitllpeldqseptspdapvqepekctvhsfcktltaSdtstHggfsvlrrhaddclppldmsqqppwqelvatdlhnsewhfrhifRgqPrRhllttgwsvfvsskklvagdafiflrgeneelrvgvrrhmrqpssvisshsmhigvlataahaittgtifsvfykprtsrsefivsvnryleaktqklsvgmrfkmrfegkrfsgtivgvqenkssvwhdsewrslkvqwdepssvfrpervspwelepln >4ldx_AB:DNA-binding_pseudobarrel_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF ARABIDOPSIS THALIANA AUXIN RESPONSE FACTOR 1 (ARF1) IN COMPLEX WITH PROTOMOR-LIKE SEQUENCE ER7 organism=Arabidopsis thaliana DNA sequence DT(C1):DA(D21) DT(C2):DA(D20) DG(C3):DC(D19) DT(C4):DA(D18) DC(C5):DG(D17) DT(C6):DA(D16) DC(C7):DG(D15) DC(C8):DG(D14) DC(C9):DG(D13) DT(C10):DA(D12) DT(C11):DA(D11) DT(C12):DA(D10) DG(C13):DC(D9) DG(C14):DC(D8) DG(C15):DC(D7) DA(C16):DT(D6) DG(C17):DC(D5) DA(C18):DT(D4) DC(C19):DG(D3) DA(C20):DT(D2) DA(C21):DT(D1) chainA (116) SER131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 (121) HIS136 0 0 0 0 0 0 0 0 0 0 0 0 10 11 7 0 0 0 0 0 0 (166) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 (169) PRO184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 6 (171) ARG186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 19 0 chainB (117) SER131 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) HIS136 0 0 0 0 0 0 3 8 7 0 0 0 0 0 0 0 0 0 0 0 0 (167) ARG181 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) PRO184 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG186 0 21 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdalcrelwhacagplvtlpregervyyfpeghmeqleasmhqgleqqmpsfnlpskilckviniqrraepetdevyaqitllpeldqseptspdapvqepekctvhsfcktltaSdtstHggfsvlrrhaddclppldmsqqppwqelvatdlhnsewhfrhifRgqPrRhllttgwsvfvsskklvagdafiflrgeneelrvgvrrhmrqpssvisshsmhigvlataahaittgtifsvfykprtsrsefivsvnryleaktqklsvgmrfkmrfegkrfsgtivgvqenkssvwhdsewrslkvqwdepssvfrpervspwelepln/lsdalcrelwhacagplvtlpregervyyfpeghmeqleasmhqgleqqmpsfnlpskilckviniqrraepetdevyaqitllpeldqseptspdapvqepekctvhsfcktltaSdtstHggfsvlrrhaddclppldmsqqppwqelvatdlhnsewhfrhifRgqPrRhllttgwsvfvsskklvagdafiflrgeneelrvgvrrhmrqqtnipssvisshsmhigvlataahaittgtifsvfykprtsrsefivsvnryleaktqklsvgmrfkmrfepekrfsgtivgvqenkssvwhdsewrslkvqwdepssvfrpervspwelepl >4ley_D: title=STRUCTURE OF MOUSE CGAS BOUND TO 18 BP DNA organism=? DNA sequence DA(L1):DT(K18) DT(L2):DA(K17) DC(L3):DG(K16) DT(L4):DA(K15) DG(L5):DC(K14) DT(L6):DA(K13) DA(L7):DT(K12) DC(L8):DG(K11) DA(L9):DT(K10) DT(L10):DA(K9) DG(L11):DC(K8) DT(L12):DA(K7) DA(L13):DT(K6) DC(L14):DG(K5) DA(L15):DT(K4) DG(L16):DC(K3) DA(L17):DT(K2) DT(L18):DA(K1) chainD ( 13) ARG161 3 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkriprgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdkl >4lez_C: title=STRUCTURE OF MOUSE CGAS BOUND TO AN 18BP DNA AND CGAS PRODUCT organism=MUS MUSCULUS DNA sequence DA(I1):DT(J18) DT(I2):DA(J17) DC(I3):DG(J16) DT(I4):DA(J15) DG(I5):DC(J14) DT(I6):DA(J13) DA(I7):DT(J12) DC(I8):DG(J11) DA(I9):DT(J10) DT(I10):DA(J9) DG(I11):DC(J8) DT(I12):DA(J7) DA(I13):DT(J6) DC(I14):DG(J5) DA(I15):DT(J4) DG(I16):DC(J3) DA(I17):DT(J2) DT(I18):DA(J1) chainC ( 13) ARG161 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkriprgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdkl >4lg0_AB:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF A TERNARY FOXO1-ETS1 DNA COMPLEX organism=HOMO SAPIENS DNA sequence DC(C3):DG(D21) DA(C4):DT(D20) DC(C5):DG(D19) DG(C6):DC(D18) DG(C7):DC(D17) DT(C8):DA(D16) DT(C9):DA(D15) DT(C10):DA(D14) DC(C11):DG(D13) DC(C12):DG(D12) DT(C13):DA(D11) DG(C14):DC(D10) DT(C15):DA(D9) DT(C16):DA(D8) DA(C17):DT(D7) DT(C18):DA(D6) DT(C19):DA(D5) DG(C20):DC(D4) DT(C21):DA(D3) chainA ( 50) SER205 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 56) ASN211 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 0 0 0 0 ( 57) SER212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 59) ARG214 0 0 0 0 0 0 0 0 0 0 9 6 1 0 0 0 0 0 0 ( 60) HIS215 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 7 0 0 0 ( 63) SER218 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 ( 64) LEU219 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB ( 56) LYS388 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG391 0 0 0 0 0 0 1 8 17 23 0 0 0 0 0 0 0 0 0 ( 62) ARG394 0 0 0 0 0 0 0 0 0 12 13 0 0 0 0 0 0 0 0 ( 63) TYR395 0 0 0 0 0 8 9 5 1 0 0 0 0 0 0 0 0 0 0 prot.sequence rrnawgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdsnSsagwkNSiRHnlSLhskfirvqnegtgksswwmlnpegg/gpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkpd >4lg0_B:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF A TERNARY FOXO1-ETS1 DNA COMPLEX organism=HOMO SAPIENS DNA sequence DC(C3):DG(D21) DA(C4):DT(D20) DC(C5):DG(D19) DG(C6):DC(D18) DG(C7):DC(D17) DT(C8):DA(D16) DT(C9):DA(D15) DT(C10):DA(D14) DC(C11):DG(D13) DC(C12):DG(D12) DT(C13):DA(D11) DG(C14):DC(D10) DT(C15):DA(D9) DT(C16):DA(D8) DA(C17):DT(D7) DT(C18):DA(D6) DT(C19):DA(D5) DG(C20):DC(D4) DT(C21):DA(D3) chainB ( 56) LYS388 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG391 0 0 0 0 0 0 1 8 17 23 0 0 0 0 0 0 0 0 0 ( 62) ARG394 0 0 0 0 0 0 0 0 0 12 13 0 0 0 0 0 0 0 0 ( 63) TYR395 0 0 0 0 0 8 9 5 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkpd >4lg7_A:DNA-binding_domain; title=CRYSTAL STRUCTURE MBD4 MBD DOMAIN IN COMPLEX WITH METHYLATED CPG DNA organism=HOMO SAPIENS DNA sequence DG(C1):DC(B12) DC(C2):DG(B11) DC(C3):DG(B10) DA(C4):DT(B9) DA(C5):DT(B8) 5CM(C6):DG(B7) DG(C7):5CM(B6) DT(C8):DA(B5) DT(C9):DA(B4) DG(C10):DC(B3) DG(C11):DC(B2) DC(C12):DG(B1) chainA ( 15) ARG97 0 0 0 0 0 26 14 0 0 0 0 0 ( 20) THR102 0 0 0 0 0 0 4 1 0 0 0 0 ( 23) ARG105 0 0 0 0 0 0 0 5 4 2 0 0 ( 25) ASP107 0 0 0 0 0 3 0 0 0 0 0 0 ( 37) ARG119 0 0 0 0 1 14 22 0 0 0 0 0 prot.sequence rksvpcgwervvkqRlfgkTagRfdvyfispqglkfRsksslanylhkngetslkpedfdftv >4lll_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(G1):DT(H24) DT(G2):DA(H23) DT(G3):DA(H22) DT(G4):DA(H21) DA(G5):DT(H20) DG(G6):DC(H19) DT(G7):DA(H18) DT(G8):DA(H17) DA(G9):DT(H16) DG(G10):DC(H15) DA(G11):DT(H14) DT(G12):DA(H13) DA(G13):DT(H12) DT(G14):DA(H11) DC(G15):DG(H10) DT(G16):DA(H9) DA(G17):DT(H8) DA(G18):DT(H7) DC(G19):DG(H6) DT(G20):DA(H5) DA(G21):DT(H4) DA(G22):DT(H3) DA(G23):DT(H2) DT(G24):DA(H1) chainA ( 59) THR60 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PRO62 0 0 0 0 0 0 1 7 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR63 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER65 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ASN66 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG87 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 59) THR60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 61) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 7 2 0 0 0 0 0 0 ( 62) THR63 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 ( 64) SER65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 ( 65) ASN66 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 86) ARG87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 2 0 prot.sequence eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq/eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq >4lll_CD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(E1):DT(F24) DT(E2):DA(F23) DT(E3):DA(F22) DT(E4):DA(F21) DA(E5):DT(F20) DG(E6):DC(F19) DT(E7):DA(F18) DT(E8):DA(F17) DA(E9):DT(F16) DG(E10):DC(F15) DA(E11):DT(F14) DT(E12):DA(F13) DA(E13):DT(F12) DT(E14):DA(F11) DC(E15):DG(F10) DT(E16):DA(F9) DA(E17):DT(F8) DA(E18):DT(F7) DC(E19):DG(F6) DT(E20):DA(F5) DA(E21):DT(F4) DA(E22):DT(F3) DA(E23):DT(F2) DT(E24):DA(F1) chainC ( 59) THR60 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PRO62 0 0 0 0 0 0 4 9 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR63 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER65 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ASN66 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG87 0 0 10 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 58) THR60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 60) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 2 0 0 0 0 0 0 ( 61) THR63 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 63) SER65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 ( 64) ASN66 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 85) ARG87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 prot.sequence eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq/ftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq >4lll_D:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(E1):DT(F24) DT(E2):DA(F23) DT(E3):DA(F22) DT(E4):DA(F21) DA(E5):DT(F20) DG(E6):DC(F19) DT(E7):DA(F18) DT(E8):DA(F17) DA(E9):DT(F16) DG(E10):DC(F15) DA(E11):DT(F14) DT(E12):DA(F13) DA(E13):DT(F12) DT(E14):DA(F11) DC(E15):DG(F10) DT(E16):DA(F9) DA(E17):DT(F8) DA(E18):DT(F7) DC(E19):DG(F6) DT(E20):DA(F5) DA(E21):DT(F4) DA(E22):DT(F3) DA(E23):DT(F2) DT(E24):DA(F1) chainD ( 58) THR60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 60) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 2 0 0 0 0 0 0 ( 61) THR63 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 63) SER65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 ( 64) ASN66 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 85) ARG87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 prot.sequence ftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq >4lll_IJ:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(K1):DT(L24) DT(K2):DA(L23) DT(K3):DA(L22) DT(K4):DA(L21) DA(K5):DT(L20) DG(K6):DC(L19) DT(K7):DA(L18) DT(K8):DA(L17) DA(K9):DT(L16) DG(K10):DC(L15) DA(K11):DT(L14) DT(K12):DA(L13) DA(K13):DT(L12) DT(K14):DA(L11) DC(K15):DG(L10) DT(K16):DA(L9) DA(K17):DT(L8) DA(K18):DT(L7) DC(K19):DG(L6) DT(K20):DA(L5) DA(K21):DT(L4) DA(K22):DT(L3) DA(K23):DT(L2) DT(K24):DA(L1) chainI ( 58) THR60 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PRO62 0 0 0 0 0 0 3 7 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) THR63 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) SER65 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ASN66 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG87 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 59) THR60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 61) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 8 1 0 0 0 0 0 0 ( 62) THR63 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 64) SER65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 ( 65) ASN66 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence ftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq/eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtrrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq >4lln_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(H1):DT(G24) DT(H2):DA(G23) DT(H3):DA(G22) DT(H4):DA(G21) DA(H5):DT(G20) DG(H6):DC(G19) DT(H7):DA(G18) DT(H8):DA(G17) DA(H9):DT(G16) DG(H10):DC(G15) DA(H11):DT(G14) DT(H12):DA(G13) DA(H13):DT(G12) DT(H14):DA(G11) DC(H15):DG(G10) DT(H16):DA(G9) DA(H17):DT(G8) DA(H18):DT(G7) DC(H19):DG(G6) DT(H20):DA(G5) DA(H21):DT(G4) DA(H22):DT(G3) DA(H23):DT(G2) DT(H24):DA(G1) chainA ( 58) THR60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 60) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 6 0 0 0 0 0 0 ( 61) THR63 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 63) SER65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 64) ASN66 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 85) ARG87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 chainB ( 59) THR60 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PRO62 0 0 0 0 0 0 6 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR63 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER65 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ASN66 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG87 0 4 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq/eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq >4lln_CD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(E1):DT(F24) DT(E2):DA(F23) DT(E3):DA(F22) DT(E4):DA(F21) DA(E5):DT(F20) DG(E6):DC(F19) DT(E7):DA(F18) DT(E8):DA(F17) DA(E9):DT(F16) DG(E10):DC(F15) DA(E11):DT(F14) DT(E12):DA(F13) DA(E13):DT(F12) DT(E14):DA(F11) DC(E15):DG(F10) DT(E16):DA(F9) DA(E17):DT(F8) DA(E18):DT(F7) DC(E19):DG(F6) DT(E20):DA(F5) DA(E21):DT(F4) DA(E22):DT(F3) DA(E23):DT(F2) DT(E24):DA(F1) chainC ( 59) THR60 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PRO62 0 0 0 0 0 0 2 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR63 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER65 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ASN66 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG87 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 61) THR60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 63) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 1 0 0 0 0 0 0 ( 64) THR63 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 66) SER65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 ( 67) ASN66 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq/sneftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq >4lln_I:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(K1):DT(L24) DT(K2):DA(L23) DT(K3):DA(L22) DT(K4):DA(L21) DA(K5):DT(L20) DG(K6):DC(L19) DT(K7):DA(L18) DT(K8):DA(L17) DA(K9):DT(L16) DG(K10):DC(L15) DA(K11):DT(L14) DT(K12):DA(L13) DA(K13):DT(L12) DT(K14):DA(L11) DC(K15):DG(L10) DT(K16):DA(L9) DA(K17):DT(L8) DA(K18):DT(L7) DC(K19):DG(L6) DT(K20):DA(L5) DA(K21):DT(L4) DA(K22):DT(L3) DA(K23):DT(L2) DT(K24):DA(L1) chainI ( 59) THR60 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PRO62 0 0 0 0 0 0 5 6 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR63 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER65 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ASN66 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG87 0 1 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlssl >4lln_IJ:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(L1):DT(K24) DT(L2):DA(K23) DT(L3):DA(K22) DT(L4):DA(K21) DA(L5):DT(K20) DG(L6):DC(K19) DT(L7):DA(K18) DT(L8):DA(K17) DA(L9):DT(K16) DG(L10):DC(K15) DA(L11):DT(K14) DT(L12):DA(K13) DA(L13):DT(K12) DT(L14):DA(K11) DC(L15):DG(K10) DT(L16):DA(K9) DA(L17):DT(K8) DA(L18):DT(K7) DC(L19):DG(K6) DT(L20):DA(K5) DA(L21):DT(K4) DA(L22):DT(K3) DA(L23):DT(K2) DT(L24):DA(K1) chainI ( 59) THR60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 61) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 6 5 0 0 0 0 0 0 ( 62) THR63 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 ( 64) SER65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 65) ASN66 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 86) ARG87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 1 0 chainJ ( 61) THR60 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) PRO62 0 0 0 0 0 0 3 4 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR63 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ASN66 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG87 0 3 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlssl/sneftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvsNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq >4lmg_AD: title=CRYSTAL STRUCTURE OF AFT2 IN COMPLEX WITH DNA organism=Saccharomyces cerevisiae DNA sequence DA(H15):DT(G13) DG(H16):DC(G12) DT(H17):DA(G11) DG(H18):DC(G10) DC(H19):DG(G9) DA(H20):DT(G8) DC(H21):DG(G7) DC(H22):DG(G6) DC(H23):DG(G5) DA(H24):DT(G4) DT(H25):DA(G3) DT(H26):DA(G2) chainA ( 35) ARG76 14 19 2 0 0 0 0 0 0 0 0 0 ( 36) SER77 0 0 4 0 0 0 0 0 0 0 0 0 ( 37) ASP78 6 0 0 0 0 0 0 0 0 0 0 0 ( 40) LYS81 6 0 0 0 0 0 0 0 0 0 0 0 chainD ( 35) ARG76 0 0 0 0 0 7 19 27 0 0 0 0 ( 36) SER77 0 0 0 0 0 4 0 0 0 0 0 0 ( 37) ASP78 0 0 0 0 0 0 1 6 0 0 0 0 ( 40) LYS81 0 0 0 0 0 0 0 7 6 0 0 0 prot.sequence lihldpvpsfedrheikpwlqkifypqgidivieRSDssKvtfkcrsvacpfriraaysvrlqkwnvvvmnnihshelrfdlitktddykkfkenlrqkndekaiktfdeleykaslnlp/lihldpvpsfedrheikpwlqkifypqgidivieRSDssKvtfkcrsacpfriraaysvrlqkwnvvvmnnihshelrfdlitktddykkfkenlrqkndekaiktfdeleykaslnlpl >4lmg_BC: title=CRYSTAL STRUCTURE OF AFT2 IN COMPLEX WITH DNA organism=Saccharomyces cerevisiae DNA sequence DA(F15):DT(E13) DG(F16):DC(E12) DT(F17):DA(E11) DG(F18):DC(E10) DC(F19):DG(E9) DA(F20):DT(E8) DC(F21):DG(E7) DC(F22):DG(E6) DC(F23):DG(E5) DA(F24):DT(E4) DT(F25):DA(E3) DT(F26):DA(E2) chainB ( 35) ARG76 19 15 5 0 0 0 0 0 0 0 0 0 ( 36) SER77 0 0 4 0 0 0 0 0 0 0 0 0 ( 37) ASP78 5 1 0 0 0 0 0 0 0 0 0 0 chainC ( 35) ARG76 0 0 0 0 0 5 19 27 0 0 0 0 ( 36) SER77 0 0 0 0 0 4 0 0 0 0 0 0 ( 37) ASP78 0 0 0 0 0 0 1 6 0 0 0 0 ( 40) LYS81 0 0 0 0 0 0 0 7 6 0 0 0 prot.sequence lihldpvpsfedrheikpwlqkifypqgidivieRSDsskvtfkcrsvacpfriraaysvrlqkwnvvvmnnihshelrfdlitktddykkfkenlrqkndekaiktfdeleykaslnlpl/lihldpvpsfedrheikpwlqkifypqgidivieRSDssKvtfkcrsvacpfriraaysvrlqkwnvvvmnnihshelrfdlitktddykkfkenlrqkndekaiktfdeleykaslnlpl >4lmg_C: title=CRYSTAL STRUCTURE OF AFT2 IN COMPLEX WITH DNA organism=Saccharomyces cerevisiae DNA sequence DA(F15):DT(E13) DG(F16):DC(E12) DT(F17):DA(E11) DG(F18):DC(E10) DC(F19):DG(E9) DA(F20):DT(E8) DC(F21):DG(E7) DC(F22):DG(E6) DC(F23):DG(E5) DA(F24):DT(E4) DT(F25):DA(E3) DT(F26):DA(E2) chainC ( 35) ARG76 0 0 0 0 0 5 19 27 0 0 0 0 ( 36) SER77 0 0 0 0 0 4 0 0 0 0 0 0 ( 37) ASP78 0 0 0 0 0 0 1 6 0 0 0 0 ( 40) LYS81 0 0 0 0 0 0 0 7 6 0 0 0 prot.sequence lihldpvpsfedrheikpwlqkifypqgidivieRSDssKvtfkcrsvacpfriraaysvrlqkwnvvvmnnihshelrfdlitktddykkfkenlrqkndekaiktfdeleykaslnlpl >4lnq_A:HIN-2000_domain-like; title=CRYSTAL STRUCTURE OF IFI202 HINA DOMAIN IN COMPLEX WITH 20BP DSDNA organism=Mus musculus DNA sequence DC(C1):DG(D20) DC(C2):DG(D19) DA(C3):DT(D18) DT(C4):DA(D17) DC(C5):DG(D16) DA(C6):DT(D15) DA(C7):DT(D14) DA(C8):DT(D13) DG(C9):DC(D12) DA(C10):DT(D11) DT(C11):DA(D10) DC(C12):DG(D9) DT(C13):DA(D8) DT(C14):DA(D7) DT(C15):DA(D6) DG(C16):DC(D5) DA(C17):DT(D4) DT(C18):DA(D3) DG(C19):DC(D2) DG(C20):DC(D1) chainA (176) ARG224 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmkgavlhekpmtvmvltatepfnykegkenmfhatvateskyyrvkvfnmdlkekftenkfitiskyfnssgileinetatvseaapnqmfevpkniirsaketlkiskikeldsgtliygvfavekkkvndksitfkikdnednikvvwdkeqhninyekgdklqlfsfhlRkgngkpilhsgnhsfikge >4lnq_AB:HIN-2000_domain-like; title=CRYSTAL STRUCTURE OF IFI202 HINA DOMAIN IN COMPLEX WITH 20BP DSDNA organism=Mus musculus DNA sequence DC(C1):DG(D20) DC(C2):DG(D19) DA(C3):DT(D18) DT(C4):DA(D17) DC(C5):DG(D16) DA(C6):DT(D15) DA(C7):DT(D14) DA(C8):DT(D13) DG(C9):DC(D12) DA(C10):DT(D11) DT(C11):DA(D10) DC(C12):DG(D9) DT(C13):DA(D8) DT(C14):DA(D7) DT(C15):DA(D6) DG(C16):DC(D5) DA(C17):DT(D4) DT(C18):DA(D3) DG(C19):DC(D2) DG(C20):DC(D1) chainA (176) ARG224 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (171) ARG224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 prot.sequence gphmkgavlhekpmtvmvltatepfnykegkenmfhatvateskyyrvkvfnmdlkekftenkfitiskyfnssgileinetatvseaapnqmfevpkniirsaketlkiskikeldsgtliygvfavekkkvndksitfkikdnednikvvwdkeqhninyekgdklqlfsfhlRkgngkpilhsgnhsfikge/gavlhekpmtvmvltatepfnykegkenmfhatvateskyyrvkvfnmdlkekftenkfitiskyfnssgileinetatvseaapnqmfevpkniirsaketlkiskikeldsgtliygvfavekkkvndksitfkikdnednikvvwdkeqhninyekgdklqlfsfhlRkgngkpilhsgnhsfikgekl >4lox_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE I-SMAMI LAGLIDADG HOMING ENDONUCLEASE BOUND TO CLEAVED DNA organism=Sordaria macrospora DNA sequence DG(D1):DC(C25) DG(D2):DC(C24) DT(D3):DA(C23) DA(D4):DT(C22) DT(D5):DA(C21) DC(D6):DG(C20) DC(D7):DG(C19) DT(D8):DA(C18) DC(D9):DG(C17) DC(D10):DG(C16) DA(D11):DT(C15) DT(D12):DA(B14) DT(D13):DA(B13) DA(D14):DT(B12) DT(D15):DA(B11) DC(E16):DG(B10) DA(E17):DT(B9) DG(E18):DC(B8) DG(E19):DC(B7) DT(E20):DA(B6) DG(E21):DC(B5) DT(E22):DA(B4) DA(E23):DT(B3) DC(E24):DG(B2) DG(E25):DC(B1) chainA ( 20) SER22 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) MET24 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG26 0 0 0 0 0 0 12 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG28 0 0 0 0 0 13 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LYS32 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR33 0 0 23 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) LEU38 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) VAL40 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR46 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS69 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER71 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG79 0 0 0 0 0 0 0 2 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) GLU81 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) SER181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (181) LYS183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 (183) ILE185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 (185) LYS187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 12 8 0 0 0 (189) SER191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 (190) ILE192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 (195) GLN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 12 0 0 (197) ILE199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (201) GLN203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (203) THR205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 (225) GLU227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (227) ASP229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (229) ARG231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 20 0 0 0 0 0 0 0 0 (232) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 0 (234) TYR236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 (238) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 prot.sequence gengklnpwavvgfidaegSfMvRvRknsKYktgwLvVaifSvTvdkkdlflleslktffgglgsiKkSgnstfSyRiEsseqltkiilpffdkysliteklgdyllfkkvlelmgtkehltqrglekivslkasinkglseelqaafpqcvptprpeinnklipdpfwlagfvsgdgSfKsIlKkseSIkvgfQsIlvfQiTqhardvklmeslisylgcgfiEkDsRgpWlYytvTnfsdiqgkiipffhqykiigskygdymdwckialimqnknhltpeglneiralkggmnkgrl >4lq0_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE I-LTRWI LAGLIDADG HOMING ENDONUCLEASE BOUND TO TARGET DNA. organism=Leptographium truncatum DNA sequence DC(B1):DG(C25) DA(B2):DT(C24) DG(B3):DC(C23) DT(B4):DA(C22) DA(B5):DT(C21) DG(B6):DC(C20) DT(B7):DA(C19) DG(B8):DC(C18) DA(B9):DT(C17) DA(B10):DT(C16) DG(B11):DC(C15) DT(B12):DA(C14) DA(B13):DT(C13) DT(B14):DA(C12) DG(B15):DC(C11) DT(B16):DA(C10) DT(B17):DA(C9) DA(B18):DT(C8) DT(B19):DA(C7) DT(B20):DA(C6) DT(B21):DA(C5) DA(B22):DT(C4) DA(B23):DT(C3) DC(B24):DG(C2) DC(B25):DG(C1) chainA ( 18) SER24 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ASN28 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) VAL30 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) HIS32 0 3 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR34 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN35 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ALA40 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) LEU42 0 0 0 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) TYR44 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLU46 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA48 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR71 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ASN73 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER75 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASP76 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR78 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LYS80 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LYS82 0 0 0 0 1 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) SER84 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) CYS183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (179) PHE185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 (181) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (183) TYR189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 6 4 0 0 0 (185) SER191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (187) LYS193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 (188) SER194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (193) ALA199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (195) GLN201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 (199) LYS205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 2 0 0 0 0 0 0 0 (201) THR207 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 (221) ARG227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (223) GLU229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 (225) ARG231 0 0 0 0 0 0 0 0 0 0 0 0 0 5 15 11 0 0 0 0 0 0 0 0 0 (230) ALA236 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (232) ASP238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (236) THR242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 prot.sequence nieylnwyicglvdaegSfgvNvVkHaTNktgyAvLtYfElAmnskdkqllelikktfdlecniYhNpSDdTlKfKvSnieqivnkiipffekytlfsqkrgdfilfckvveliknkehltlnglmkilsikaamnlglsenlkkefpgclsvkrpefglsnlnkrwlagfiegeaCfFvSiYnSpKSklgkAvQlvfKiTqhirdkiliesivellncgRvEvRksneAcDftvTsikeienyiipffneypligqklknyedfklifdmmktkdhlteeglskiieiknkmntnri >4lt5_A:Regulatory_protein_AraC;Clavaminate_synthase-like; title=STRUCTURE OF A NAEGLERIA TET-LIKE DIOXYGENASE IN COMPLEX WITH 5- METHYLCYTOSINE DNA organism=Naegleria gruberi DNA sequence DA(B1):DT(C28) DG(B2):DC(C27) DA(B3):DT(C26) DA(B4):DT(C25) DT(B5):DA(C24) DT(B6):DA(C23) DG(B7):DC(C22) 5CM(B8):DG(C21) DG(B9):5CM(C20) DT(B10):DA(C19) DT(B11):DA(C18) DC(B12):DG(C17) DC(B13):DG(C16) DA(B14):DT(C15) chainA ( 81) LYS137 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 85) TYR141 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 91) ASN147 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 92) SER148 0 0 0 0 0 0 0 0 6 2 0 0 0 0 ( 93) MET149 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (156) ALA212 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (168) ARG224 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (175) ASP231 0 0 0 0 0 0 0 0 15 0 0 0 0 0 (178) ASP234 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (237) VAL293 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (239) PHE295 0 0 0 0 0 0 0 0 30 0 0 0 0 0 (241) HIS297 0 0 0 0 0 0 0 0 10 0 0 0 0 0 (254) GLN310 0 0 0 0 0 0 0 24 0 0 0 0 0 0 prot.sequence inkksllqnllskckttfqqsftnanitlkdekwlknvrtayfvcdhdgsvelaylpnvlpkelveeftekfesiqtgrkKdtgysgildnSMpfnyvtadlsqelgqylseivnpqinyyisklltcvssrtinylvslndsyyalnnclypstafnslkpsndghrirkphkdnlditpsslfyfgnfqntegyleltdknckvfvqpgdvlffkgneykhvvanitsgwriglvyfahkgsktkpyyedtQknslkihketk >4lup_A:Sigma2_domain_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF THE COMPLEX FORMED BY REGION OF E. COLI SIGMAE BOUND TO ITS -10 ELEMENT NON TEMPLATE STRAND organism=Escherichia coli DNA sequence DT(B107) DG(B108) DT(B109) DC(B110) DA(B111) DA(B112) DA(B113) chainA ( 52) LYS56 0 0 6 0 0 0 0 ( 56) ALA60 0 0 1 0 0 0 0 ( 60) PHE64 0 0 0 8 0 0 0 ( 61) ARG65 0 0 0 30 0 0 0 ( 63) ASP67 0 0 0 4 0 0 0 ( 64) SER68 0 0 0 2 0 0 0 ( 67) TYR71 0 0 0 0 0 0 2 ( 68) THR72 0 0 0 0 0 5 8 ( 69) TRP73 0 0 2 13 0 0 0 ( 71) TYR75 0 0 0 0 0 0 54 ( 72) ARG76 0 0 0 0 0 0 8 ( 73) ILE77 0 0 19 0 0 0 0 ( 76) ASN80 0 15 5 0 0 0 0 ( 80) ASN84 4 4 0 0 0 0 0 prot.sequence ltdqvlvervqkgdqkafnllvvryqhkvaslvsryvpsgdvpdvvqeafiKayrAldsFRgDSafYTWlYRIavNtakNylvaqgrrlel >4lvi_A: title=MOBM RELAXASE DOMAIN (MOBV; MOB_PRE) BOUND TO PLASMID PMV158 ORIT DNA (22NT). MN-BOUND CRYSTAL STRUCTURE AT PH 4.6 organism=Streptococcus agalactiae DNA sequence DA(B1):DT(C18) DC(B2):DG(C17) DT(B3):DA(C16) DT(B4):DA(C15) DT(B5):DA(C14) DA(B6):DT(C13) DT(B7):DA(C12) chainA ( 9) LYS10 1 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 4 9 0 ( 69) ARG74 0 1 8 6 0 0 0 (144) LYS149 10 11 6 0 0 0 0 prot.sequence symvarmqKmkagnlggafkhnervsnkdinpsrshlnyeltdrdrsvsyekqikdyvnenkvsnRaiRkdavlcdewiitsdkdffekldeeqtrtffetaknyfaenygesniayasvhldestphmhmgvvpfengklssKamfdreelkhiqedlprymsdhgfelergklnseakhktvaefkra >4lvj_A: title=MOBM RELAXASE DOMAIN (MOBV; MOB_PRE) BOUND TO PLASMID PMV158 ORIT DNA (22NT). MN-BOUND CRYSTAL STRUCTURE AT PH 5.5 organism=Streptococcus agalactiae DNA sequence DA(B1):DT(C18) DC(B2):DG(C17) DT(B3):DA(C16) DT(B4):DA(C15) DT(B5):DA(C14) DA(B6):DT(C13) DT(B7):DA(C12) chainA ( 9) LYS10 2 0 0 0 0 0 0 ( 67) ARG71 0 0 0 0 7 8 0 ( 70) ARG74 0 1 7 7 0 0 0 (145) LYS149 11 11 9 0 0 0 0 prot.sequence symvarmqKmkagnlggafkhnervfsnkdinpsrshlnyeltdrdrsvsyekqikdyvnenkvsnRaiRkdavlcdewiitsdkdffekldeeqtrtffetaknyfaenygesniayasvhldestphmhmgvvpfengklssKamfdreelkhiqedlprymsdhgfelergklnseakhktvaefkram >4lvk_A: title=MOBM RELAXASE DOMAIN (MOBV; MOB_PRE) BOUND TO PLASMID PMV158 ORIT DNA (22NT+3'PHOSPHATE). MN-BOUND CRYSTAL STRUCTURE AT PH 4.6 organism=Streptococcus agalactiae DNA sequence DA(B1):DT(C18) DC(B2):DG(C17) DT(B3):DA(C16) DT(B4):DA(C15) DT(B5):DA(C14) DA(B6):DT(C13) DT(B7):DA(C12) chainA ( 9) LYS10 1 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 6 0 ( 69) ARG74 0 2 8 6 0 0 0 (144) LYS149 9 10 9 0 0 0 0 prot.sequence symvarmqKmkagnlggafkhnervsnkdinpsrshlnyeltdrdrsvsyekqikdyvnenkvsnRaiRkdavlcdewiitsdkdffekldeeqtrtffetaknyfaenygesniayasvhldestphmhmgvvpfengklssKamfdreelkhiqedlprymsdhgfelergklnseakhktvaefkram >4lvl_A: title=MOBM RELAXASE DOMAIN (MOBV; MOB_PRE) BOUND TO PLASMID PMV158 ORIT DNA (22NT+3'THIOPHOSPHATE). MN-BOUND CRYSTAL STRUCTURE AT PH 6.8 organism=Streptococcus agalactiae DNA sequence DA(B1):DT(C18) DC(B2):DG(C17) DT(B3):DA(C16) DT(B4):DA(C15) DT(B5):DA(C14) DA(B6):DT(C13) DT(B7):DA(C12) chainA ( 9) LYS10 1 0 0 0 0 0 0 ( 70) ARG71 0 0 0 0 2 8 1 ( 73) ARG74 0 0 8 6 0 0 0 (148) LYS149 10 12 10 0 0 0 0 prot.sequence symvarmqKmkagnlggafkhnervfethsnkdinpsrshlnyeltdrdrsvsyekqikdyvnenkvsnRaiRkdavlcdewiitsdkdffekldeeqtrtffetaknyfaenygesniayasvhldestphmhmgvvpfengklssKamfdreelkhiqedlprymsdhgfelergklnseakhktvaefkrama >4lvm_A: title=MOBM RELAXASE DOMAIN (MOBV; MOB_PRE) BOUND TO PLASMID PMV158 ORIT DNA (23NT). MN-BOUND CRYSTAL STRUCTURE AT PH 6.5 organism=Streptococcus agalactiae DNA sequence DA(E12):DT(B7) DT(E13):DA(B6) DA(E14):DT(B5) DA(E15):DT(B4) DA(E16):DT(B3) DG(E17):DC(B2) DT(E18):DA(B1) chainA ( 64) ARG71 0 6 1 0 0 0 0 ( 67) ARG74 0 0 0 7 6 0 0 (142) LYS149 0 0 0 0 6 10 5 prot.sequence symvarmqkmkagnlggafkhnervkdinpsrshlnyeltdrdrsvsyekqikdyvnenkvsnRaiRkdavlcdewiitsdkdffekldeeqtrtffetaknyfaenygesniayasvhldestphmhmgvvpfengklssKamfdreelkhiqedlprymsdhgfelergklnseakhktvaefkramadm >4lvs_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA MISMATCHED SUBSTRATE COMPLEX WITH MN2+, 2.5 MIN organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 35 ( 26) LYS35 0 0 0 0 8 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4lz1_H:Trypsin-like_serine_proteases; title=X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN THROMBIN AND THE TBA DELETION MUTANT LACKING THYMINE 12 NUCLEOBASE organism=HOMO SAPIENS DNA sequence DG(D1) DG(D2) DT(D3) DT(D4) DG(D5) DG(D6) DT(D7) DG(D8) DT(D9) DG(D10) DG(D11) DT(D13) DG(D14) DG(D15) chainH ( 9) ILE24 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 66) HIS71 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG75 0 11 3 8 0 0 0 0 0 0 0 9 24 0 ( 71) TYR76 0 0 0 0 0 0 0 0 0 0 0 17 0 0 ( 72) GLU77 0 0 10 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77A 0 0 0 11 33 0 0 0 0 0 4 6 0 0 ( 75) ILE79 0 0 3 4 0 0 0 0 0 0 0 0 0 0 prot.sequence ivegsdaeIgmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkHsrtRYeRnIekismlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqf >4lz4_CD:Trypsin-like_serine_proteases; title=X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN THROMBIN AND THE TBA DELETION MUTANT LACKING THYMINE 3 NUCLEOBASE organism=HOMO SAPIENS DNA sequence DG(F1) DG(F2) DT(F4) DG(F5) DG(F6) DT(F7) DG(F8) DT(F9) DG(F10) DG(F11) DT(F12) DT(F13) DG(F14) DG(F15) chainC chainD ( 9) ILE24 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 66) HIS71 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 70) ARG75 0 0 8 22 0 0 0 0 0 7 2 5 0 0 ( 71) TYR76 0 0 11 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLU77 0 0 0 0 0 0 0 0 0 0 11 0 0 0 ( 73) ARG77A 0 3 6 0 0 0 0 0 0 0 0 9 22 0 ( 75) ILE79 0 0 0 0 0 0 0 0 0 0 5 3 0 0 prot.sequence tfgsgeadcglrplfekksledkterellesyid/ivegsdaeIgmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkHsrtRYeRnIekismlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfg >4m0a_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE MU POST-CATALYTIC COMPLEX organism=HOMO SAPIENS DNA sequence DA(T5):DT(P5) DT(T6):DA(P4) DA(T7):DT(P3) DC(T8):DG(P2) DG(T9):DC(P1) chainA (230) ARG387 0 1 5 0 0 (232) PHE389 0 0 2 1 0 (269) LYS438 18 0 0 0 0 (272) GLN441 2 0 0 0 0 (273) ARG442 22 0 0 0 0 (276) ARG445 8 4 0 0 0 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsegrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqqqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqfeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >4m2y_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 8-BRG AS THE TEMPLATE BASE IN A 1-NUCLEOTIDE GAPPED DNA organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 24) HIS34 40 0 0 0 0 ( 25) LYS35 8 0 0 0 0 ( 28) ALA38 5 0 0 0 0 prot.sequence lnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpsdekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4m3r_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DT/DG AT POSITION N-1 OF PRIMER/TEMPLATE DUPLEX organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DA(P110):DT(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DT(P115):DG(T5) ATP(A1001):DT(T4) chainA (279) LYS279 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (361) PRO361 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (411) ASP411 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (413) THR413 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (414) SER414 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (415) ALA415 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (416) TYR416 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (482) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (486) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (560) LYS560 0 0 0 0 0 0 0 0 0 0 0 0 0 14 (564) ASN564 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (623) ASP623 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (706) LYS706 0 0 0 0 0 0 0 0 0 0 6 7 0 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaYpsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >4m3t_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DT/DG AT POSITION N-2 OF PRIMER/TEMPLATE DUPLEX organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DT(P114):DG(T6) DC(P115):DG(T5) ATP(A1001):DT(T4) chainA (279) LYS279 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (361) PRO361 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (411) ASP411 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (413) THR413 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (414) SER414 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (415) ALA415 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (482) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (486) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (560) LYS560 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (564) ASN564 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (623) ASP623 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 6 0 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygDTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4m3u_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DT/DG AT POSITION N-3 OF PRIMER/TEMPLATE DUPLEX organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DG(T7) DA(P114):DT(T6) DC(P115):DG(T5) ATP(A1001):DT(T4) chainA (279) LYS279 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (361) PRO361 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (411) ASP411 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (413) THR413 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (414) SER414 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (415) ALA415 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (482) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (486) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (560) LYS560 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (564) ASN564 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (623) ASP623 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (706) LYS706 0 0 0 0 0 0 0 0 0 0 9 6 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >4m3w_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DT/DG AT POSITION N-4 OF PRIMER/TEMPLATE DUPLEX organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DA(P110):DT(T10) DC(P111):DG(T9) DT(P112):DG(T8) DT(P113):DA(T7) DA(P114):DT(T6) DC(P115):DG(T5) ATP(A1001):DT(T4) chainA (279) LYS279 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (361) PRO361 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (411) ASP411 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (413) THR413 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (414) SER414 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (415) ALA415 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (482) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (486) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (560) LYS560 0 0 0 0 0 0 0 0 0 0 0 0 0 14 (564) ASN564 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (623) ASP623 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 6 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >4m3x_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DT/DG AT POSITION N-5 OF PRIMER/TEMPLATE DUPLEX organism=Enterobacteria phage RB69 DNA sequence DT(T4):ATP(A1001) DG(T5):DC(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DT(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (279) LYS279 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) PRO361 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ASP411 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) THR413 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) SER414 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) ALA415 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) ARG482 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) LYS486 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (560) LYS560 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (564) ASN564 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (623) ASP623 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 0 6 5 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (800) LYS800 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4m3y_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DG/DT AT POSITION N-1 OF PRIMER/TEMPLATE DUPLEX organism=Enterobacteria phage RB69 DNA sequence DT(T4):ATP(A1001) DT(T5):DG(P115) DT(T6):DA(P114) DA(T7):DT(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (279) LYS279 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) PRO361 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ASP411 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) THR413 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) SER414 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) ALA415 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) ARG482 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) LYS486 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (560) LYS560 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (564) ASN564 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (623) ASP623 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 0 7 6 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4m3z_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DG/DT AT POSITION N-2 OF PRIMER/TEMPLATE DUPLEX organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DC(P111):DG(T9) DT(P112):DA(T8) DT(P113):DA(T7) DG(P114):DT(T6) DC(P115):DG(T5) ATP(A1001):DT(T4) chainA (279) LYS279 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (361) PRO361 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (411) ASP411 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (413) THR413 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (414) SER414 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (415) ALA415 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (482) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (486) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (560) LYS560 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (564) ASN564 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (623) ASP623 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 8 0 0 (734) LYS734 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygDTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4m41_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DG/DT AT POSITION N-3 OF PRIMER/TEMPLATE DUPLEX organism=Enterobacteria phage RB69 DNA sequence DT(T4):ATP(A1001) DG(T5):DC(P115) DT(T6):DA(P114) DT(T7):DG(P113) DA(T8):DT(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (279) LYS279 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) PRO361 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ASP411 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) THR413 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) SER414 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) ALA415 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) ARG482 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) LYS486 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (560) LYS560 14 0 0 0 0 0 0 0 0 0 0 0 0 0 (564) ASN564 14 0 0 0 0 0 0 0 0 0 0 0 0 0 (623) ASP623 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 0 7 7 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >4m42_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DG/DT AT POSITION N-4 OF PRIMER/TEMPLATE DUPLEX organism=Enterobacteria phage RB69 DNA sequence DT(T4):ATP(A1001) DG(T5):DC(P115) DT(T6):DA(P114) DA(T7):DT(P113) DT(T8):DG(P112) DG(T9):DC(P111) DC(T10):DG(P110) DA(T11):DT(P109) DG(T12):DC(P108) DT(T13):DA(P107) DC(T14):DG(P106) DC(T15):DG(P105) DG(T16):DC(P104) DC(T17):DG(P103) chainA (279) LYS279 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) PRO361 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ASP411 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) THR413 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) SER414 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) ALA415 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) ARG482 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (486) LYS486 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (560) LYS560 14 0 0 0 0 0 0 0 0 0 0 0 0 0 (564) ASN564 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (623) ASP623 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 0 7 5 0 0 0 0 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmfdf >4m45_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RB69 DNA POLYMERASE TERNARY COMPLEX WITH DG/DT AT POSITION N-5 OF PRIMER/TEMPLATE DUPLEX organism=Enterobacteria phage RB69 DNA sequence DG(P103):DC(T17) DC(P104):DG(T16) DG(P105):DC(T15) DG(P106):DC(T14) DA(P107):DT(T13) DC(P108):DG(T12) DT(P109):DA(T11) DG(P110):DC(T10) DG(P111):DT(T9) DT(P112):DA(T8) DT(P113):DA(T7) DA(P114):DT(T6) DC(P115):DG(T5) ATP(A1001):DT(T4) chainA (279) LYS279 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (361) PRO361 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (411) ASP411 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (413) THR413 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (414) SER414 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (415) ALA415 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (482) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (486) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (560) LYS560 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (564) ASN564 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (623) ASP623 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (706) LYS706 0 0 0 0 0 0 0 0 0 0 5 7 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykKfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfsPiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltsaypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkalinglagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKRyalnvwdmegtryaepklkimgletqksstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpkcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >4m47_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE COMPLEXED WITH 8-BRG IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE GTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 23) HIS34 36 0 0 0 0 ( 24) LYS35 8 0 0 0 0 ( 27) ALA38 4 0 0 0 0 prot.sequence nggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpskeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirpltgvageplpvdsekdifdyiqwkyrepkdrse >4m6f_A:Resolvase-like;Homeodomain-like; title=DIMER OF THE G-SEGMENT INVERTASE BOUND TO A DNA SUBSTRATE organism=ENTEROBACTERIA PHAGE MU DNA sequence DA(C15):DT(B17) DA(C16):DT(B16) DA(C17):DT(B15) DC(C18):DG(B14) DT(C19):DA(B13) DT(C20):DA(B12) DA(C21):DT(B11) DT(C22):DA(B10) DC(C23):DG(B9) DA(C24):DT(B8) DA(C25):DT(B7) DA(C26):DT(B6) DA(C27):DT(B5) DA(C28):DT(B4) DC(C29):DG(B3) DT(C30):DA(B2) DT(C31):DA(B1) chainA (118) ILE119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (122) THR123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 (126) LEU127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 (135) ILE136 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (138) ARG139 0 0 0 0 0 0 0 0 0 2 5 16 7 1 0 0 0 (139) PRO140 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (170) ALA171 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (171) LEU172 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 (172) SER173 0 0 0 0 1 3 7 8 0 0 0 0 0 0 0 0 0 (173) THR174 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (174) LEU175 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (176) LYS177 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (182) ARG183 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ALA184 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ILE186 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 (186) GLU187 0 0 0 0 0 4 20 12 0 0 0 0 0 0 0 0 0 (187) ASN188 0 0 0 0 20 14 2 0 0 0 0 0 0 0 0 0 0 (188) ASP189 0 0 0 0 0 3 16 34 13 0 0 0 0 0 0 0 0 prot.sequence ligyvrvstndqntdlqrnalvcagceqifedklsgtrtdrpglkralkrlqkgdtlvvwkldrlgrsmkhlislvgelrerginfrsltdsidtsspmgrfffhvmgalaeverelIierTmagLaaarnkgrIggRPpkltkaeqeqagrllaqgiprkqvaliydvALSTLyKkhpakRAhIEND >4m8b_R: title=FUNGAL PROTEIN organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(A1):DC(B20) DC(A2):DG(B19) DG(A3):DC(B18) DC(A4):DG(B17) DG(A5):DC(B16) DT(A6):DA(B15) DT(A7):DA(B14) DA(A8):DT(B13) DG(A9):DC(B12) DT(A10):DA(B11) DG(A11):DC(B10) DT(A12):DA(B9) DT(A13):DA(B8) DT(A14):DA(B7) DA(A15):DT(B6) DC(A16):DG(B5) DG(A17):DC(B4) DC(A18):DG(B3) DG(A19):DC(B2) chainR ( 62) ARG62 0 0 0 0 0 0 8 8 15 0 0 0 0 0 0 0 0 0 0 ( 72) SER72 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 ( 73) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 74) ILE74 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 79) LEU79 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 81) TYR81 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (173) VAL181 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (175) ASN183 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 (177) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 19 6 0 0 prot.sequence sspgptcygyiddeqdlalvfqgvfngnlrcierrpydaekvelvnpgnifvfneeksgikRwtdgfswspSRIsgkfLvYreynrlgshnvpeyniferahrkyfytgllkktfslkfnmtdstkletfhliayytekdihqgslrrpsenpffhkfrpsqklldalqkvaVgNgRsnps >4m94_A:DNA/RNA_polymerases; title=D(ATCCGTTATAACGGAT) COMPLEXED WITH MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE CATALYTIC FRAGMENT organism=Moloney murine leukemia virus isolate Shinnick DNA sequence DA(G10):DA(B8) DA(G11):DT(B7) DC(G12):DG(B5) DG(G13):DC(B4) DG(G14):DC(B3) DA(G15):DT(B2) DT(G16):DA(B1) chainA ( 76) LEU99 0 0 0 0 0 0 19 ( 86) VAL112 0 0 0 0 0 0 2 ( 88) ASP114 0 0 0 0 0 0 9 ( 90) ARG116 0 0 0 0 3 9 9 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvktndyrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >4m95_A:DNA/RNA_polymerases; title=D(ATCCGTTATAACGGAT)COMPLEXED WITH MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE CATALYTIC FRAGMENT organism=Moloney murine leukemia virus isolate Shinnick DNA sequence DA(B1):DT(G16) DT(B2):DA(G15) DC(B3):DG(G14) DC(B4):DG(G13) DG(B5):DC(G12) DT(B6):DA(G11) DT(B7):DA(G10) DA(B8):DT(G9) chainA ( 41) TYR64 1 0 0 0 0 0 0 0 ( 76) LEU99 17 0 0 0 0 0 0 0 ( 86) VAL112 1 0 0 0 0 0 0 0 ( 88) ASP114 7 0 0 0 0 0 0 0 ( 90) ARG116 10 10 3 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvktndyrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >4m9e_A:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF KLF4 ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH METHYLATED DNA organism=Mus musculus DNA sequence DG(C1):DC(B10) DC(C2):DG(B9) DC(C3):DG(B8) DA(C4):DT(B7) 5CM(C5):DG(B6) DG(C6):5CM(B5) DC(C7):DG(B4) DC(C8):DG(B3) DT(C9):DA(B2) DC(C10):DG(B1) chainA ( 15) LYS413 5 7 6 0 0 0 0 0 0 0 ( 17) SER415 4 1 0 0 0 0 0 0 0 0 ( 18) HIS416 0 0 11 22 0 0 0 0 0 0 ( 45) ARG443 0 0 0 7 12 29 0 0 0 0 ( 46) SER444 0 0 2 0 0 0 0 0 0 0 ( 47) ASP445 0 0 0 8 1 5 0 0 0 0 ( 48) GLU446 0 0 0 0 0 3 0 0 0 0 ( 51) ARG449 0 0 0 0 0 9 12 5 0 0 ( 73) ARG471 0 0 0 0 0 0 2 12 9 0 ( 75) ASP473 0 0 0 0 0 6 6 1 0 0 ( 76) HIS474 0 0 0 0 0 0 0 0 6 9 prot.sequence thtcdyagcgktytKsSHlkahlrthtgekpyhcdwdgcgwkfaRSDeltRhyrkhtghrpfqcqkcdrafsRSDHlalhmkrhf >4m9g_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA E295K BINARY COMPLEX organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 24) HIS34 0 0 0 0 37 ( 25) LYS35 0 0 0 0 8 ( 28) ALA38 0 0 0 0 5 prot.sequence lnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftskllhqvveqlqkvhfitdtlskgetkfmgvcqlpseyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftinkytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4m9h_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA E295K SOAKED WITH DTTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 24) HIS34 0 0 0 0 38 ( 25) LYS35 0 0 0 0 8 ( 28) ALA38 0 0 0 0 5 prot.sequence lnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftskllhqvveqlqkvhfitdtlskgetkfmgvcqlpskeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftinkytirplgvtgvageplpvdsekdifdyiqwkyrepkdrs >4m9j_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA E295K SOAKED WITH DUMPNPP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 39 0 0 0 0 ( 26) LYS35 8 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftspkllhqvveqlqkvhfitdtlskgetkfmgvcqlpseyphrridirlipkdqyycgvlyftgsdifnknmrahaftinkytirplvtgvageplpvdsekdifdyyrepkdrse >4m9l_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA E295K SOAKED WITH DCTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 8 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpsekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftinkytirpvageplpvsekdifdyiqwkyrepkdrse >4m9n_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA E295K SOAKED WITH DATP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 37 0 0 0 0 ( 26) LYS35 9 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpseyphrridirlipkdqyycgvlyftgsdifnknmrahtinkytirplgeplpvdsekdifdyrepkdrse >4m9v_C:beta-beta-alpha_zinc_fingers; title=ZFP57 MUTANT (E182Q) IN COMPLEX WITH 5-CARBOXYLCYTOSINE DNA organism=Mus musculus DNA sequence DA(A2):DT(B11) DT(A3):DA(B10) DT(A4):DA(B9) DG(A5):DC(B8) DC(A6):DG(B7) DG(A8):DG(B6) DC(A9):DG(B4) DA(A10):DT(B3) DG(A11):DC(B2) chainC ( 18) ASP151 0 0 0 4 1 0 0 0 0 ( 19) ALA152 0 1 0 0 0 0 0 0 0 ( 20) SER153 0 0 6 5 2 0 0 0 0 ( 23) SER156 0 1 1 0 0 0 0 0 0 ( 24) ARG157 0 0 17 11 9 2 0 0 0 ( 45) ARG178 0 0 0 0 2 13 0 0 0 ( 48) SER181 0 0 0 2 3 0 0 0 0 ( 49) GLN182 0 0 0 0 0 1 0 0 0 ( 52) ARG185 0 0 0 0 0 2 12 24 0 prot.sequence pserpffcnfcgktyrDaSglsRhrrahlgyrprscpecgkcfRDqsQvnRhlkvhqnkp >4mde_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF BACTERIAL POLYNUCLEOTIDE KINASE PRODUCT COMPLEX BOUND TO GDP AND DNA organism=CLOSTRIDIUM THERMOCELLUM DNA sequence DC(D1) DC(D2) DT(D3) DG(D4) DT(D5) chainB ( 52) GLN51 12 0 2 0 0 ( 53) THR52 0 0 2 0 0 ( 55) THR54 0 3 7 0 0 ( 59) PHE58 0 32 0 0 0 ( 63) HIS62 0 2 0 0 0 ( 87) ALA86 0 4 0 0 0 (126) VAL125 2 0 0 0 0 (129) TYR128 1 0 0 52 0 (130) VAL129 12 0 0 0 0 (132) ARG131 0 0 0 3 0 (134) HIS133 7 0 0 0 0 prot.sequence smkltipelslvvligssgsgkstfakkhfkptevissnfcrglvsddendQTvTgaaFdvlHyivskrlqlgkltvvdatnvqesArkplieiakdyhcfpvavvfnlpekvcqernknrtdrqVeeYViRkHtqqmkksikglqregfryvyilnspeeveevvferqp >4mf2_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH O6MG AS THE TEMPLATE BASE IN A 1-NUCLEOTIDE GAPPED DNA organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 24) HIS34 0 0 0 0 39 ( 25) LYS35 0 0 0 0 10 ( 28) ALA38 0 0 0 0 4 prot.sequence lnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsepkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4mfc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH O6MG IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE CTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 24) HIS34 37 0 0 0 0 ( 25) LYS35 9 0 0 0 0 ( 28) ALA38 4 0 0 0 0 prot.sequence lnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsekllhqvveqlqkvhfitdtlskgetkfmgvcqlpsdekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4mff_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH O6MG IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE TTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 24) HIS34 0 0 0 0 38 ( 25) LYS35 0 0 0 0 9 ( 28) ALA38 0 0 0 0 4 prot.sequence lnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskdekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4mg2_A:Clavaminate_synthase-like; title=ALKBH2 F102A CROSS-LINKED TO UNDAMAGED DSDNA organism=Homo sapiens DNA sequence DG(B12):DG(C40) DA(B13):DC(C39) DC(B14):DT(C38) DA(B15):DG(C37) DG(B16):DT(C36) DT(B17):DA(C34) DG(B18):DC(C33) DA(B19):DT(C32) DG(B20):DC(C31) DA(B21):DT(C30) DC(B22):DG(C29) DA(B23):DT(C28) chainA ( 44) ARG98 23 0 0 0 0 0 0 0 0 0 0 0 ( 53) SER107 1 0 0 0 0 0 0 0 0 0 0 0 (115) CYS169 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence mswrhiraegldssytvlfgkaeadeifqelekeveyftgalaRvqvagkwhSvprkqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhiCehrdderelaspiasvsfgasrdfvfrhkdsvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkillm >4mgt_A:Clavaminate_synthase-like; title=ALKBH2 R110A CROSS-LINKED TO UNDAMAGED DSDNA organism=Homo sapiens DNA sequence DG(B12):DG(C40) DA(B13):DC(C39) DC(B14):DT(C38) DA(B15):DG(C37) DG(B16):DT(C36) DT(B17):DA(C34) DG(B18):DC(C33) DA(B19):DT(C32) DG(B20):DC(C31) DA(B21):DT(C30) DC(B22):DG(C29) DA(B23):DT(C28) chainA ( 44) ARG98 22 0 0 0 0 0 0 0 0 0 0 0 ( 53) SER107 1 0 0 0 0 0 0 0 0 0 0 0 (115) CYS169 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence mswrhiraegldssytvlfgkaeadeifqelekeveyftgalaRvqvfgkwhSvpakqatygdagltytfsgltlspkpwipvlerirdhvsgvtgqtfnfvlinrykdgsdhiCehrdderelaspiasvsfgasrdfvfrhkdspsrrvavvrlplahgsllmmnhptnthwyhslpvrkkvlaprvnltfrkillg >4mhg_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ETV6 BOUND TO A SPECIFIC DNA SEQUENCE organism=Mus musculus DNA sequence DA(B2):DT(C14) DC(B3):DG(C13) DC(B4):DG(C12) DC(B5):DG(C11) DG(B6):DC(C10) DG(B7):DC(C9) DA(B8):DT(C8) DA(B9):DT(C7) DG(B10):DC(C6) DT(B11):DA(C5) DG(B12):DC(C4) DA(B13):DT(C3) DG(B14):DC(C2) chainA ( 54) GLU388 0 3 8 1 0 0 0 0 0 0 0 0 0 ( 55) LYS389 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 58) ARG392 0 0 0 0 23 18 10 1 0 0 0 0 0 ( 59) ALA393 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 61) ARG395 0 0 0 13 14 0 0 0 0 0 0 0 0 ( 62) HIS396 0 0 0 0 0 0 2 9 4 0 0 0 0 ( 76) ARG410 4 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rllwdyvyqllsdsryenfirwedkeskifrivdpnglarlwgnhknrtnmtyEKmSRAlRHyyklniirkepgqRllfrfmktpdeims >4mht_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH NATIVE DNA AND ADOHCY organism=HAEMOPHILUS HAEMOLYTICUS DNA sequence DG(C402):DC(D433) DA(C403):DT(D432) DT(C404):DA(D431) DA(C405):DT(D430) DG(C406):DC(D429) 5CM(C407):DG(D428) DC(C409):DG(D426) DT(C410):DA(D425) DA(C411):DT(D424) DT(C412):DA(D423) DC(C413):DG(D422) chainA ( 86) ILE86 0 0 0 0 0 0 2 3 3 0 0 ( 87) SER87 0 0 0 0 0 7 6 0 0 0 0 (237) GLN237 0 0 0 0 0 22 28 0 0 0 0 (239) GLU239 0 0 0 0 0 4 0 0 0 0 0 (240) ARG240 0 0 0 0 0 0 8 4 0 0 0 (254) TYR254 0 0 0 0 1 0 0 0 0 0 0 (296) SER296 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvrlgivgkggQgeRiystrgiaitlsaYgggifaktggylvngktrklhprecarvmgypdsykvhpstSqaykqfgnsvvinvlqyiaynigsslnfkpy >4mtd_ABCD:"Winged_helix"_DNA-binding_domain; title=ZINC UPTAKE REGULATOR COMPLEXED WITH ZINC AND DNA organism=Escherichia coli DNA sequence DA(Y1):DT(Z31) DG(Y2):DC(Z30) DA(Y3):DT(Z29) DA(Y4):DT(Z28) DG(Y5):DC(Z27) DT(Y6):DA(Z26) DG(Y7):DC(Z25) DT(Y8):DA(Z24) DG(Y9):DC(Z23) DA(Y10):DT(Z22) DT(Y11):DA(Z21) DA(Y12):DT(Z20) DT(Y13):DA(Z19) DT(Y14):DA(Z18) DA(Y15):DT(Z17) DT(Y16):DA(Z16) DA(Y17):DT(Z15) DA(Y18):DT(Z14) DC(Y19):DG(Z13) DA(Y20):DT(Z12) DT(Y21):DA(Z11) DT(Y22):DA(Z10) DT(Y23):DA(Z9) DC(Y24):DG(Z8) DA(Y25):DT(Z7) DT(Y26):DA(Z6) DG(Y27):DC(Z5) DA(Y28):DT(Z4) DC(Y29):DG(Z3) DT(Y30):DA(Z2) DA(Y31):DT(Z1) chainA ( 42) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 19 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) LYS59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) PRO60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) TYR64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 chainB ( 43) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) LYS59 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) PRO60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 5 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) TYR64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG65 0 0 0 0 0 0 0 0 0 0 8 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 41) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 9 0 0 0 0 0 0 0 0 0 0 0 ( 55) LYS59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 56) PRO60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 57) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 3 0 0 0 0 0 0 0 0 ( 60) TYR64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 ( 61) ARG65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 13 0 0 0 0 0 0 chainD ( 44) TYR45 0 0 0 0 0 0 0 0 0 0 8 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) LYS59 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) PRO60 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PRO61 0 0 0 0 0 0 0 7 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR64 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG65 0 0 0 0 0 16 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac/ktttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac/ttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac/ektttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac >4mtd_D:"Winged_helix"_DNA-binding_domain; title=ZINC UPTAKE REGULATOR COMPLEXED WITH ZINC AND DNA organism=Escherichia coli DNA sequence DA(Y1):DT(Z31) DG(Y2):DC(Z30) DA(Y3):DT(Z29) DA(Y4):DT(Z28) DG(Y5):DC(Z27) DT(Y6):DA(Z26) DG(Y7):DC(Z25) DT(Y8):DA(Z24) DG(Y9):DC(Z23) DA(Y10):DT(Z22) DT(Y11):DA(Z21) DA(Y12):DT(Z20) DT(Y13):DA(Z19) DT(Y14):DA(Z18) DA(Y15):DT(Z17) DT(Y16):DA(Z16) DA(Y17):DT(Z15) DA(Y18):DT(Z14) DC(Y19):DG(Z13) DA(Y20):DT(Z12) DT(Y21):DA(Z11) DT(Y22):DA(Z10) DT(Y23):DA(Z9) DC(Y24):DG(Z8) DA(Y25):DT(Z7) DT(Y26):DA(Z6) DG(Y27):DC(Z5) DA(Y28):DT(Z4) DC(Y29):DG(Z3) DT(Y30):DA(Z2) DA(Y31):DT(Z1) chainD ( 44) TYR45 0 0 0 0 0 0 0 0 0 0 8 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) LYS59 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) PRO60 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PRO61 0 0 0 0 0 0 0 7 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR64 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG65 0 0 0 0 0 16 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ektttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac >4mte_A:"Winged_helix"_DNA-binding_domain; title=ZINC UPTAKE REGULATOR COMPLEXED WITH ZINC AND DNA organism=Escherichia coli DNA sequence DA(Y1):DT(Z31) DG(Y2):DC(Z30) DA(Y3):DT(Z29) DA(Y4):DT(Z28) DG(Y5):DC(Z27) DT(Y6):DA(Z26) DG(Y7):DC(Z25) DT(Y8):DA(Z24) DG(Y9):DC(Z23) DA(Y10):DT(Z22) DT(Y11):DA(Z21) DA(Y12):DT(Z20) DT(Y13):DA(Z19) DT(Y14):DA(Z18) DA(Y15):DT(Z17) DT(Y16):DA(Z16) DA(Y17):DT(Z15) DA(Y18):DT(Z14) DC(Y19):DG(Z13) DA(Y20):DT(Z12) DT(Y21):DA(Z11) DT(Y22):DA(Z10) DT(Y23):DA(Z9) DC(Y24):DG(Z8) DA(Y25):DT(Z7) DT(Y26):DA(Z6) DG(Y27):DC(Z5) DA(Y28):DT(Z4) DC(Y29):DG(Z3) DT(Y30):DA(Z2) DA(Y31):DT(Z1) chainA ( 42) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 14 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) LYS59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) PRO60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) TYR64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac >4mte_ABCD:"Winged_helix"_DNA-binding_domain; title=ZINC UPTAKE REGULATOR COMPLEXED WITH ZINC AND DNA organism=Escherichia coli DNA sequence DA(Y1):DT(Z31) DG(Y2):DC(Z30) DA(Y3):DT(Z29) DA(Y4):DT(Z28) DG(Y5):DC(Z27) DT(Y6):DA(Z26) DG(Y7):DC(Z25) DT(Y8):DA(Z24) DG(Y9):DC(Z23) DA(Y10):DT(Z22) DT(Y11):DA(Z21) DA(Y12):DT(Z20) DT(Y13):DA(Z19) DT(Y14):DA(Z18) DA(Y15):DT(Z17) DT(Y16):DA(Z16) DA(Y17):DT(Z15) DA(Y18):DT(Z14) DC(Y19):DG(Z13) DA(Y20):DT(Z12) DT(Y21):DA(Z11) DT(Y22):DA(Z10) DT(Y23):DA(Z9) DC(Y24):DG(Z8) DA(Y25):DT(Z7) DT(Y26):DA(Z6) DG(Y27):DC(Z5) DA(Y28):DT(Z4) DC(Y29):DG(Z3) DT(Y30):DA(Z2) DA(Y31):DT(Z1) chainA ( 42) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 14 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) LYS59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) PRO60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) TYR64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 chainB ( 43) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) LYS59 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) PRO60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) TYR64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG65 0 0 0 0 0 0 0 0 0 0 15 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 41) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 9 0 0 0 0 0 0 0 0 0 0 0 ( 55) LYS59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 56) PRO60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 57) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 2 0 0 0 0 0 0 0 0 ( 60) TYR64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 ( 61) ARG65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 13 0 0 0 0 0 0 chainD ( 44) TYR45 0 0 0 0 0 0 0 0 0 0 8 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) LYS59 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) PRO60 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PRO61 0 0 0 0 0 0 0 7 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR64 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG65 0 0 0 0 0 16 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac/ktttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac/ttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac/ektttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac >4mzr_ABCD:p53-like_transcription_factors;p53_tetramerization_domain; title=CRYSTAL STRUCTURE OF A POLYPEPTIDE P53 MUTANT BOUND TO DNA organism=Homo sapiens DNA sequence DA(L27):DT(K26) DC(L28):DG(K25) DG(L29):DC(K24) DG(L30):DC(K23) DG(L31):DC(K22) DC(L32):DG(K21) DA(L33):DT(K20) DA(L34):DT(K19) DG(L35):DC(K18) DT(L36):DA(K17) DC(L37):DG(K16) DT(L38):DA(K15) DG(L39):DC(K14) DG(L40):DC(K13) DG(L41):DC(K12) DC(L42):DG(K11) DA(L43):DT(K10) DA(L44):DT(K9) DG(L45):DC(K8) DT(L46):DA(K7) DC(L47):DG(K6) DT(L48):DA(K5) DC(L49):DG(K4) DA(L50):DT(K3) chainA (155) ARG248 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 4 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) PHE121 0 0 0 0 0 0 0 0 0 8 7 12 1 0 0 0 0 0 0 0 0 0 0 0 (155) ARG248 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 8 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 28) PHE121 0 0 0 0 0 0 0 0 0 0 0 0 9 4 6 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 14 0 0 0 0 0 0 0 chainD (155) ARG248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 2 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtakfgtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnRrpilviitledssgnllgrdsfevrvcaCpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat/sssvpsqktyqgsygfrlgflhsgtaKFgtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnRrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat/sssvpsqktyqgsygfrlgflhsgtaKFgtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnrrpilviitledssgnllgrdsfevrvcaCpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat/sssvpsqktyqgsygfrlgflhsgtakfgtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnRrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat >4mzr_D:p53-like_transcription_factors;p53_tetramerization_domain; title=CRYSTAL STRUCTURE OF A POLYPEPTIDE P53 MUTANT BOUND TO DNA organism=Homo sapiens DNA sequence DT(K3):DA(L50) DG(K4):DC(L49) DA(K5):DT(L48) DG(K6):DC(L47) DA(K7):DT(L46) DC(K8):DG(L45) DT(K9):DA(L44) DT(K10):DA(L43) DG(K11):DC(L42) DC(K12):DG(L41) DC(K13):DG(L40) DC(K14):DG(L39) DA(K15):DT(L38) DG(K16):DC(L37) DA(K17):DT(L36) DC(K18):DG(L35) DT(K19):DA(L34) DT(K20):DA(L33) DG(K21):DC(L32) DC(K22):DG(L31) DC(K23):DG(L30) DC(K24):DG(L29) DG(K25):DC(L28) DT(K26):DA(L27) chainD (155) ARG248 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 2 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtakfgtctyspalnkmfvqlaktvpvqlyvdstpppgtrvramaiykqsqhmtevvrrcphherssdsdglappqhlirvegnlraeylddpntfrhsvvvpyeppevgsdyttiyfkfmcnsscmggmnRrpilviitledssgnllgrdsfevrvcACpgRdrrteeenlrkktmdgeyftlqirgrerfeqfrernealelkdaqat >4n41_A:Ribonuclease_H-like; title=STRUCTURE OF THERMUS THERMOPHILUS ARGONAUTE BOUND TO GUIDE DNA AND 15- MER TARGET DNA organism=? DNA sequence DG(C2):DC(D14) DA(C3):DT(D13) DG(C4):DC(D12) DG(C5):DC(D11) DT(C6):DA(D10) DA(C7):DT(D9) DG(C8):DC(D8) DT(C9):DA(D7) DA(C10):DT(D6) DG(C11):DC(D5) DG(C12):DC(D4) DT(C13):DA(D3) chainA (180) ARG192 0 0 0 0 0 0 0 1 0 0 0 0 (244) LEU267 0 0 0 0 0 3 2 0 0 0 0 0 (419) HIS445 36 0 0 0 0 0 0 0 0 0 0 0 (420) ARG446 12 0 0 0 0 0 0 0 0 0 0 0 (423) ASN449 8 1 0 0 0 0 0 0 0 0 0 0 (521) ARG548 0 0 0 0 0 0 0 0 0 0 2 3 (549) SER576 0 0 0 0 0 0 0 0 0 0 1 0 (583) PHE610 0 0 3 0 0 0 0 0 0 0 0 0 (584) ARG611 0 0 0 3 0 0 0 0 0 0 0 0 (620) PHE647 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gktevflnrfalrplnpeelrpwrlevvldppllaqvarraggvtvrmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkRvrnaydrrtwellrlgeedpkelldyhaskqgreggrvawvadpkdprkpiphltgllvpvltLedlheelalslpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppmawedrnrlkalllreglpsqilnvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavgggghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrdgRvpqdefalalealaregiaydlvsvrkSgggrvypvqgrladglyvpledktfllltvhrdFRgtprplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >4n47_A:Ribonuclease_H-like; title=STRUCTURE OF THERMUS THERMOPHILUS ARGONAUTE BOUND TO GUIDE DNA AND 12- MER TARGET DNA organism=THERMUS THERMOPHILUS DNA sequence DC(D1):DG(C12) DC(D2):DG(C11) DT(D3):DA(C10) DA(D4):DT(C9) DC(D5):DG(C8) DT(D6):DA(C7) DA(D7):DT(C6) DC(D8):DG(C5) DC(D9):DG(C4) DT(D10):DA(C3) DC(D11):DG(C2) chainA (432) HIS445 0 0 0 0 0 0 0 0 0 0 40 (433) ARG446 0 0 0 0 0 0 0 0 0 0 12 (436) ASN449 0 0 0 0 0 0 0 0 0 0 8 (591) PHE610 0 0 0 0 0 0 0 0 3 1 0 (592) ARG611 0 0 0 0 0 0 0 4 0 0 0 (628) PHE647 0 0 0 0 0 0 0 0 0 0 5 prot.sequence gktevflnrfalrplnpeelrpwrlevvldpppgreevypllaqvarraggvtvrmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpkelplpgglslldyhaskgrlqgreggrvawvadpkdprkpiphltgllvpvltledlslpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppmawedrnrlkalllreglpsqilnvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavgghllwtlpeaeripqevvwdlleetlwafrrkagrlpsrvlllrdgrvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrdFRgtprplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >4n56_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX STRUCTURE OF KLENOW FRAGMENT OF TAQ DNA POLYMERASE I707L MUTANT (CS3C KLENTAQ) WITH DNA organism=Thermus aquaticus DNA sequence DG(C205):DOC(B112) DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 0 5 5 0 0 0 0 0 0 0 (280) ARG573 9 4 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 0 1 11 0 0 0 0 0 0 0 0 0 (360) TYR671 3 0 0 0 0 0 0 0 0 0 0 0 (412) ASN750 1 0 0 0 0 0 0 0 0 0 0 0 (416) GLN754 4 1 0 0 0 0 0 0 0 0 0 0 (446) HIS784 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaaktinfgvlYgfpkvrawlektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4n5s_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX STRUCTURE OF KLENOW FRAGMENT OF TAQ DNA POLYMERASE I707L MUTANT (CS3C KLENTAQ) WITH DNA AND DDCTP organism=THERMUS AQUATICUS DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (251) LYS540 0 0 0 0 0 0 0 4 6 0 0 (284) ARG573 0 0 0 0 0 0 0 0 0 0 3 (291) ASN580 0 0 0 0 0 0 0 0 0 1 0 (294) ASN583 0 0 0 0 0 0 0 0 1 11 1 (465) GLN754 0 0 0 0 0 0 0 0 0 0 1 (495) HIS784 0 0 0 0 0 0 0 0 0 0 1 prot.sequence spkaleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawlektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsak >4n76_B:Ribonuclease_H-like; title=STRUCTURE OF THERMUS THERMOPHILUS ARGONAUTE BOUND TO GUIDE DNA AND CLEAVED TARGET DNA WITH MN2+ organism=THERMUS THERMOPHILUS DNA sequence DG(E2):DC(F18) DA(E3):DT(F17) DG(E4):DC(F16) DG(E5):DC(F15) DT(E6):DA(F14) DA(E7):DT(F13) DG(E8):DC(F12) DT(E9):DA(F11) DA(E10):DT(F10) chainB (427) HIS445 40 0 0 0 0 0 0 0 0 (428) ARG446 12 0 0 0 0 0 0 0 0 (431) ASN449 8 1 0 0 0 0 0 0 0 (593) ARG611 0 0 1 2 0 0 0 0 0 (597) ARG615 0 0 0 0 1 0 0 0 0 (629) PHE647 6 0 0 0 0 0 0 0 0 prot.sequence hlgktevflnrfalrplnpeelrpwrlevvldpppgrvypllaqvarraggvtvrmgdglaswsppevlvlegtlarqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrledpkelplpgglslldyhaskgrlqgreggrvawvarkpiphltgllvpvltledlslalslpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppmawedrnrlkalllreglpsqilnvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavggdgghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrdgrvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrdfRgtpRplklvheagdtplealahqifhltrlypaSgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >4nca_A:Ribonuclease_H-like; title=STRUCTURE OF THERMUS THERMOPHILUS ARGONAUTE BOUND TO GUIDE DNA 19-MER AND TARGET DNA IN THE PRESENCE OF MN2+ organism=? DNA sequence DG(C2):DC(D18) DA(C3):DT(D17) DG(C4):DC(D16) DG(C5):DC(D15) DT(C6):DA(D14) DA(C7):DT(D13) DG(C8):DC(D12) DT(C9):DA(D11) DA(C10):DT(D10) DG(C11):DC(G6) DG(C12):DC(G5) DT(C13):DA(G4) DT(C14):DA(G3) DG(C15):DC(G2) DT(C16):DA(G1) chainA ( 41) TYR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 ( 42) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 ( 45) ALA47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 57) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 79) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (265) LEU267 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 (278) SER280 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (443) HIS445 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ARG446 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) ASN449 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (608) PHE610 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 (609) ARG611 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (645) PHE647 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hlgktevflnrfalrplnpeelrpwrlevvldpppgreevYPllAqvarraggvtvRmgdglaswsppevlvlegtlaRmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpkelplpgglslldyhaskgrlqgreggrvawvadpkdprkpiphltgllvpvltLedlheeegslalSlpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppmawedrnrlkalllreglpsqilnvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfRfggaacavggdgghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrdgrvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrdFRgtprplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >4ncb_B:Ribonuclease_H-like; title=STRUCTURE OF THERMUS THERMOPHILUS ARGONAUTE BOUND TO GUIDE DNA AND 19- MER TARGET DNA WITH MG2+ organism=THERMUS THERMOPHILUS DNA sequence DG(E2):DC(F18) DA(E3):DT(F17) DG(E4):DC(F16) DG(E5):DC(F15) DT(E6):DA(F14) DA(E7):DT(F13) DG(E8):DC(F12) DT(E9):DA(F11) DA(E10):DT(F10) DG(E11):DC(H9) DG(E12):DC(H8) DT(E13):DA(H7) DT(E14):DA(H6) DG(E15):DC(H5) DT(E16):DA(H4) chainB ( 39) TYR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 ( 40) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 43) ALA47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 55) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (257) LEU267 0 0 0 0 1 3 2 0 0 0 0 0 0 0 0 (432) HIS445 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (433) ARG446 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (436) ASN449 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (535) ARG548 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 (597) PHE610 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 (598) ARG611 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 (602) ARG615 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 (634) PHE647 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gktevflnrfalrplnpeelrpwrlevvldpppgreevYPllAqvarraggvtvRmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpkelplpgglslldyhaskgrlqgreggrvawvadpiphltgllvpvltLedlheslalslpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppmawedrnrlkalllreglpsqilnvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavggdgghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrdgRvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrdFRgtpRplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >4ndh_B:HIT-like; title=HUMAN APRATAXIN (APTX) BOUND TO DNA, AMP, AND ZN - PRODUCT COMPLEX organism=HOMO SAPIENS DNA sequence DG(H1):DC(G10) DT(H2):DA(G9) DT(H3):DA(G8) DC(H4):DG(G7) DT(H5):DA(G6) DA(H6):DT(G5) DG(H7):DC(G4) DA(H8):DT(G3) DA(H9):DT(G2) chainB (115) LYS277 0 0 0 0 0 0 0 0 1 prot.sequence hmghwsqglkismqdpkmqvykdeqvvvikdkypkaryhwlvlpwtsisslkavarehlellkhmhtvgekvivdfagssklrfrlgyhaipsmshvhlhvisqdfdspclknkKhwnsfnteyflesqaviemvqeagrvtvrdgmpellklplrchecqqllpsipqlkehlrkhw >4ndy_IKLM: title=HUMAN MHF1-MHF2 DNA COMPLEX organism=HOMO SAPIENS DNA sequence DA(E2):DT(F26) DA(E3):DT(F25) DA(E4):DT(F24) DA(E5):DT(F23) DA(E6):DT(F22) DA(E7):DT(F21) DA(E8):DT(F20) DA(E9):DT(F19) DA(E10):DT(F18) DA(E11):DT(F17) DA(E12):DT(F16) DA(E13):DT(F15) DA(E14):DT(F14) DA(E15):DT(F13) DA(E16):DT(F11) DA(E17):DT(F10) DA(E19):DT(F9) DA(E20):DT(F8) DA(E21):DT(F7) DA(E22):DT(F5) DA(E23):DT(F4) DA(E24):DT(F3) DA(E25):DT(F2) DA(E26):DT(F1) chainI ( 97) ARG110 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK chainL ( 6) GLU13 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG17 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS29 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainM ( 6) GLU13 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG17 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanleRkaqkkkks/syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanleRkaqkkkks/sgfrkElvsRllhlhfkddktKvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf/sgfrkElvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf >4ndy_L:Histone-fold; title=HUMAN MHF1-MHF2 DNA COMPLEX organism=? DNA sequence DT(F1):DA(E26) DT(F2):DA(E25) DT(F3):DA(E24) DT(F4):DA(E23) DT(F5):DA(E22) DT(F7):DA(E21) DT(F8):DA(E20) DT(F9):DA(E19) DT(F10):DA(E17) DT(F11):DA(E16) DT(F13):DA(E15) DT(F14):DA(E14) DT(F15):DA(E13) DT(F16):DA(E12) DT(F17):DA(E11) DT(F18):DA(E10) DT(F19):DA(E9) DT(F20):DA(E8) DT(F21):DA(E7) DT(F22):DA(E6) DT(F23):DA(E5) DT(F24):DA(E4) DT(F25):DA(E3) DT(F26):DA(E2) chainL ( 6) GLU13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 10) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 22) LYS29 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgfrkElvsRllhlhfkddktKvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf >4ndy_QTUV: title=HUMAN MHF1-MHF2 DNA COMPLEX organism=HOMO SAPIENS DNA sequence DA(O2):DT(P26) DA(O3):DT(P25) DA(O4):DT(P24) DA(O5):DT(P23) DA(O6):DT(P22) DA(O7):DT(P20) DA(O8):DT(P19) DA(O9):DT(P18) DA(O10):DT(P17) DA(O11):DT(P16) DA(O12):DT(P15) DA(O13):DT(P14) DA(O14):DT(P13) DA(O15):DT(P12) DA(O16):DT(P11) DA(O17):DT(P10) DA(O19):DT(P9) DA(O20):DT(P7) DA(O21):DT(P6) DA(O22):DT(P5) DA(O23):DT(P4) DA(O24):DT(P3) DA(O25):DT(P2) DA(O26):DT(P1) chainQ ( 97) ARG110 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT ( 97) ARG110 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 chainU ( 6) GLU13 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG17 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainV ( 6) GLU13 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG17 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU35 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanleRkaqkkkks/syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanleRkaqkkkks/sgfrkElvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf/sgfrkElvsRllhlhfkddktkvsgdaLqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf >4ne1_IKf: title=HUMAN MHF1 MHF2 DNA COMPLEXES organism=HOMO SAPIENS DNA sequence DT(F1) DT(F2) DT(F3) DT(F4) DT(F5) DT(F6) DT(F7) DT(F8) DT(F9) DT(F10) DT(F11) DT(F12) DT(F13) DT(F14) DT(F15) DT(F16) DT(F17) DT(F18) DT(F19) DT(F20) DT(F21) DT(F22) DT(F23) DT(F24) DT(F25) DT(F26) chainI chainK ( 97) ARG110 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainf prot.sequence syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanlerkaqkkkks/syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanleRkaqkkkks/syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqa >4ne1_LMj: title=HUMAN MHF1 MHF2 DNA COMPLEXES organism=HOMO SAPIENS DNA sequence DA(E2):DT(F26) DA(E3):DT(F25) DA(E4):DT(F24) DA(E5):DT(F23) DA(E6):DT(F21) DA(E7):DT(F20) DA(E8):DT(F19) DA(E9):DT(F18) DA(E10):DT(F17) DA(E11):DT(F16) DA(E12):DT(F15) DA(E13):DT(F14) DA(E14):DT(F13) DA(E15):DT(F12) DA(E16):DT(F11) DA(E18):DT(F10) DA(E19):DT(F9) DA(E20):DT(F8) DA(E21):DT(F7) DA(E22):DT(F5) DA(E23):DT(F4) DA(E24):DT(F3) DA(E25):DT(F2) DA(E26):DT(F1) chainL ( 10) ARG17 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 10) ARG17 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainj prot.sequence sgfrkelvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf/sgfrkelvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf/sgfrkelvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf >4ne1_QTUV: title=HUMAN MHF1 MHF2 DNA COMPLEXES organism=HOMO SAPIENS DNA sequence DA(s1):DT(t26) DA(s2):DT(t25) DA(s3):DT(t24) DA(s4):DT(t23) DA(s5):DT(t22) DA(s6):DT(t21) DA(s7):DT(t20) DA(s8):DT(t19) DA(s9):DT(t18) DA(s10):DT(t17) DA(s11):DT(t16) DA(s12):DT(t15) DA(s13):DT(t14) DA(s14):DT(t13) DA(s15):DT(t12) DA(s16):DT(t11) DA(s17):DT(t10) DA(s18):DT(t9) DA(s20):DT(t8) DA(s21):DT(t7) DA(s22):DT(t5) DA(s23):DT(t4) DA(s24):DT(t3) DA(s25):DT(t2) DA(s26):DT(t1) chainQ ( 97) ARG110 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT ( 97) ARG110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainU ( 10) ARG17 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 chainV ( 4) ARG11 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) GLU13 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG17 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanleRkaqkkkks/syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanleRkaqkkkks/sgfrkelvsRllhlhfkddktKvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf/sgfRkElvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf >4ne1_Wknop: title=HUMAN MHF1 MHF2 DNA COMPLEXES organism=HOMO SAPIENS DNA sequence DT(P1):DA(O26) DT(P2):DA(O25) DT(P3):DA(O24) DT(P4):DA(O23) DT(P6):DA(O22) DT(P7):DA(O21) DT(P8):DA(O20) DT(P9):DA(O19) DT(P10):DA(O18) DT(P11):DA(O16) DT(P12):DA(O15) DT(P13):DA(O14) DT(P14):DA(O13) DT(P15):DA(O12) DT(P16):DA(O11) DT(P17):DA(O10) DT(P18):DA(O9) DT(P19):DA(O8) DT(P20):DA(O7) DT(P21):DA(O6) DT(P23):DA(O5) DT(P24):DA(O4) DT(P25):DA(O3) DT(P26):DA(O2) chainW chaink chainn chaino ( 10) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 22) LYS29 0 0 0 0 0 0 0 0 0 2 5 3 0 0 0 0 0 0 0 0 0 0 0 0 chainp ( 4) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 ( 6) GLU13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 ( 10) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence sgfrkelvsrllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf/syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanlerkaqkkkks/syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanlerkaqkkkks/sgfrkelvsRllhlhfkddktKvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf/sgfRkElvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf >4ne1_h:Histone-fold; title=HUMAN MHF1 MHF2 DNA COMPLEXES organism=? DNA sequence DT(v1):DA(u26) DT(v2):DA(u25) DT(v3):DA(u24) DT(v4):DA(u23) DT(v6):DA(u22) DT(v7):DA(u21) DT(v8):DA(u20) DT(v9):DA(u19) DT(v10):DA(u18) DT(v11):DA(u17) DT(v12):DA(u15) DT(v13):DA(u14) DT(v14):DA(u13) DT(v15):DA(u12) DT(v16):DA(u11) DT(v17):DA(u10) DT(v18):DA(u9) DT(v19):DA(u8) DT(v21):DA(u7) DT(v22):DA(u6) DT(v23):DA(u5) DT(v24):DA(u4) DT(v25):DA(u3) DT(v26):DA(u2) chainh ( 10) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence sgfrkelvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf >4ne1_hi: title=HUMAN MHF1 MHF2 DNA COMPLEXES organism=HOMO SAPIENS DNA sequence DT(v1):DA(u26) DT(v2):DA(u25) DT(v3):DA(u24) DT(v4):DA(u23) DT(v6):DA(u22) DT(v7):DA(u21) DT(v8):DA(u20) DT(v9):DA(u19) DT(v10):DA(u18) DT(v11):DA(u17) DT(v12):DA(u15) DT(v13):DA(u14) DT(v14):DA(u13) DT(v15):DA(u12) DT(v16):DA(u11) DT(v17):DA(u10) DT(v18):DA(u9) DT(v19):DA(u8) DT(v21):DA(u7) DT(v22):DA(u6) DT(v23):DA(u5) DT(v24):DA(u4) DT(v25):DA(u3) DT(v26):DA(u2) chainh ( 10) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chaini ( 10) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence sgfrkelvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf/sgfrkelvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf >4nhj_A:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE RSTA DNA-BINDING DOMAIN IN COMPLEX WITH RSTA BOX organism=Klebsiella pneumoniae DNA sequence DG(C2):DC(D23) DT(C3):DA(D22) DT(C4):DA(D21) DG(C5):DC(D20) DT(C6):DA(D19) DA(C7):DT(D18) DC(C8):DG(D17) DA(C9):DT(D16) DT(C10):DA(D15) DT(C11):DA(D14) DC(C12):DG(D13) DC(C13):DG(D12) DG(C14):DC(D11) DT(C15):DA(D10) DT(C16):DA(D9) DA(C17):DT(D8) DC(C18):DG(D7) DT(C19):DA(D6) DC(C20):DG(D5) DC(C21):DG(D4) DC(C22):DG(D3) DT(C23):DA(D2) chainA ( 66) ARG199 0 0 0 0 1 4 12 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASP202 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) VAL203 0 0 0 8 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) SER206 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG207 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG226 0 0 0 0 0 0 0 0 3 3 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phktisfgsltidpvnrqvmlggenvalstadfdmlwelathagqimdrdallknlrgvtydgmdRsvDVaiSRlrkklldnatepyriktvRnkgylfaph >4nhj_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE RSTA DNA-BINDING DOMAIN IN COMPLEX WITH RSTA BOX organism=Klebsiella pneumoniae DNA sequence DA(D2):DT(C23) DG(D3):DC(C22) DG(D4):DC(C21) DG(D5):DC(C20) DA(D6):DT(C19) DG(D7):DC(C18) DT(D8):DA(C17) DA(D9):DT(C16) DA(D10):DT(C15) DC(D11):DG(C14) DG(D12):DC(C13) DG(D13):DC(C12) DA(D14):DT(C11) DA(D15):DT(C10) DT(D16):DA(C9) DG(D17):DC(C8) DT(D18):DA(C7) DA(D19):DT(C6) DC(D20):DG(C5) DA(D21):DT(C4) DA(D22):DT(C3) DC(D23):DG(C2) chainA ( 66) ARG199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 12 4 1 0 0 0 0 ( 69) ASP202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 70) VAL203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 8 0 0 0 ( 73) SER206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 74) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 ( 93) ARG226 0 0 0 0 0 0 0 0 0 0 0 5 3 3 0 0 0 0 0 0 0 0 chainB ( 65) ARG199 0 0 0 0 14 12 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) SER200 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ASP202 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) VAL203 0 0 0 0 0 0 3 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG207 0 0 0 0 0 0 0 0 3 14 16 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phktisfgsltidpvnrqvmlggenvalstadfdmlwelathagqimdrdallknlrgvtydgmdRsvDVaiSRlrkklldnatepyriktvRnkgylfaph/hktisfgsltidpvnrqvmlggenvalstadfdmlwelathagqimdrdallknlrgvtydgmdRSvDVaisRlrkklldnatepyriktvRnkgylfaph >4ni7_A:4-helical_cytokines; title=CRYSTAL STRUCTURE OF HUMAN INTERLEUKIN 6 IN COMPLEX WITH A MODIFIED NUCLEOTIDE APTAMER (SOMAMER SL1025) organism=HOMO SAPIENS DNA sequence DG(B1) DG(B2) DA(B4) DG(B5) DG(B10) DG(B11) DA(B13) DA(B17) DC(B18) DG(B21) DA(B24) DA(B25) DG(B26) DG(B29) DG(B31) DG(B32) chainA ( 1) ARG16 0 0 1 0 0 0 0 0 0 0 0 0 0 8 0 0 prot.sequence RqpltsseridkqiryilDgisalrketcnksnlnlpkmaekdgcfqsgfneetclvkiitgllefevyleylqnrfesseeqaravqmstkvliqflqkkaittpdpttnaslltklqaqnqwlqdmtthlilrsfkeflqsslralrqm >4nid_A:Clavaminate_synthase-like; title=CRYSTAL STRUCTURE OF ALKB PROTEIN WITH COFACTORS BOUND TO DSDNA CONTAINING M6A organism=Escherichia coli DNA sequence DA(B2):DT(C13) DG(B3):DC(C12) DG(B4):DC(C11) DT(B5):DA(C10) DA(B6):DT(C9) DA(B7):DT(C8) DA(B9):DA(C7) DC(B11):DT(C6) DG(B12):DG(C5) DT(B13):DG(C4) chainA (118) CYS129 0 0 0 0 0 0 4 0 0 0 (150) ARG161 0 0 0 0 0 0 3 9 13 12 prot.sequence qeplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdKdepdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagk >4nig_A:Clavaminate_synthase-like; title=CRYSTAL STRUCTURE OF ALKB D135I/E136H MUTANT PROTEIN WITH COFACTORS BOUND TO DSDNA CONTAINING M6A/A organism=Escherichia coli DNA sequence DA(B2):DT(C13) DG(B3):DC(C12) DG(B4):DC(C11) DT(B5):DA(C10) DA(B6):DT(C9) DA(B7):DT(C8) DA(B9):DA(C7) DC(B11):DT(C6) DG(B12):DG(C5) DT(B13):DG(C4) chainA (117) CYS129 0 0 0 0 0 0 4 0 0 0 (149) ARG161 0 0 0 0 0 0 2 9 11 13 prot.sequence eplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdkihpdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagk >4nih_A:Clavaminate_synthase-like; title=CRYSTAL STRUCTURE OF ALKB E136L MUTANT PROTEIN WITH COFACTORS BOUND TO DSDNA CONTAINING M6A/A organism=Escherichia coli DNA sequence DG(C4):DT(B13) DG(C5):DG(B12) DT(C6):DC(B11) DA(C7):DA(B9) DT(C8):DA(B7) DT(C9):DA(B6) DA(C10):DT(B5) DC(C11):DG(B4) DC(C12):DG(B3) DT(C13):DA(B2) chainA (116) CYS129 0 0 0 4 0 0 0 0 0 0 (148) ARG161 12 13 11 3 0 0 0 0 0 0 prot.sequence plaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdKdlpdlrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagk >4nii_A:Clavaminate_synthase-like; title=CRYSTAL STRUCTURE OF ALKB D135I MUTANT PROTEIN WITH COFACTORS BOUND TO DSDNA CONTAINING M6A/A organism=Escherichia coli DNA sequence DA(B2):DT(C13) DG(B3):DC(C12) DG(B4):DC(C11) DT(B5):DA(C10) DA(B6):DT(C9) DA(B7):DT(C8) DA(B9):DA(C7) DC(B11):DT(C6) DG(B12):DG(C5) DT(B13):DG(C4) chainA (118) CYS129 0 0 0 0 0 0 4 0 0 0 (147) ARG161 0 0 0 0 0 0 3 9 13 13 prot.sequence qeplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtthrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklClhqdkilrapivsvslglpaifqfgglkRndplkrlllehgdvvvwggesrlfyhgiqplkagfhpltidcrynltfrqagk >4nlg_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=Y-FAMILY DNA POLYMERASE CHIMERA DBH-DPO4(243-245)-DBH organism=Sulfolobus acidocaldarius DNA sequence DG(P1):DC(T19) DG(P2):DC(T18) DC(P3):DG(T17) DA(P4):DT(T16) DC(P5):DG(T15) DT(P6):DA(T14) DG(P7):DC(T13) DA(P8):DT(T12) DT(P9):DA(T11) DC(P10):DG(T10) DG(P11):DT(T9) DG(P12):DC(T8) DG(P13):DC(T7) chainA (245) SER245 0 0 0 0 0 0 0 0 0 0 1 0 0 (249) TYR249 0 0 0 0 0 0 0 0 0 0 0 0 6 (297) SER297 0 0 0 0 0 0 0 0 1 0 0 0 0 (337) LYS337 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence mivifvdfdyffaqveevlnpqykgkplvvcvysgrtktsgavatanyearklgvkagmpiikamqiapsaiyvpmrkpiyeafsnrimnllnkhadkievasideayldvtnkvegnfengielarkikqeilekekitvtvgvapnkilakiiadkskpnglgvirptevqdflneldideipgigsvlarrlnelgiqklrdilsknynelekitgkakalyllklaqnkysepvenksrkShgrYltlpyntrdvkvilpylkkaineaynkvngipmritviaimedldilSkgkkfkhgisidnaykvaedllrellvrdkrrnvrrigvKldniiin >4nlk_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 8BRG IN THE TEMPLATE BASE-PAIRED WITH INCOMING NON-HYDROLYZABLE CTP organism=Homo sapiens DNA sequence DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 1 6 0 0 0 0 0 0 0 (262) TYR271 8 0 0 0 0 0 0 0 0 0 (274) ARG283 4 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4nln_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA CONTAINING A TEMPLATE 8BRG AND INCOMING CTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 39 0 0 0 0 ( 29) LYS35 9 0 0 0 0 ( 32) ALA38 4 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4nlz_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA CONTAINING A MISMATCHED TEMPLATE 8BRG AND INCOMING GTP organism=Homo sapiens DNA sequence DC(T5):DG(P11) DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA ( 26) HIS34 37 0 0 0 0 0 0 0 0 0 0 (223) LYS234 0 0 0 6 0 0 0 0 0 0 0 (259) TYR271 3 0 0 0 0 0 0 0 0 0 0 (264) ASP276 10 0 0 0 0 0 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaiHkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskdekeyphrridirlipkdqyycgvlYftgsDifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4nm1_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH A NICKED DNA CONTAINING A 8BRG-C AT N-1 POSITION AND G-C AT N POSITION organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T6) DC(P11):DC(T5) chainA ( 25) HIS34 0 0 0 0 0 0 0 0 0 0 33 (225) LYS234 0 0 0 0 0 0 0 6 1 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 7 5 (267) ASP276 0 0 0 0 0 0 0 0 0 0 7 (270) ASN279 0 0 0 0 0 0 0 0 0 4 5 (271) LYS280 0 0 0 0 0 0 0 0 0 12 0 (274) ARG283 0 0 0 0 0 0 0 0 0 13 0 prot.sequence tlnggitdmltelanfeknvsqaiHkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4nm2_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH A NICKED DNA CONTAINING A 8BRG-G AT N-1 POSITION AND G-C AT N POSITION organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 23) HIS34 38 0 0 0 0 ( 24) LYS35 11 0 0 0 0 ( 27) ALA38 4 0 0 0 0 prot.sequence nggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskdekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4nm6_A: title=CRYSTAL STRUCTURE OF TET2-DNA COMPLEX organism=HOMO SAPIENS DNA sequence DA(B1):DT(C12) DC(B2):DG(C11) DC(B3):DG(C10) DA(B4):DT(C9) DC(B5):DG(C8) 5CM(B6):DG(C7) DG(B7):5CM(C6) DG(B8):DC(C5) DT(B9):DA(C4) DG(B10):DC(C3) chainA (122) ARG1261 0 0 0 0 0 10 0 0 0 0 (147) SER1286 0 0 0 0 0 2 0 0 0 0 (152) TRP1291 0 0 0 0 2 0 0 0 0 0 (154) MET1293 0 0 0 0 44 3 0 0 0 0 (155) TYR1294 0 0 0 0 0 13 58 0 0 0 (156) TYR1295 0 0 0 0 0 0 6 0 0 0 (163) ARG1302 0 0 0 0 0 0 4 2 2 0 (233) THR1372 0 0 0 0 0 6 0 0 0 0 (245) ASP1384 0 0 0 0 0 6 0 0 0 0 (247) HIS1386 0 0 0 0 0 1 0 0 0 0 (248) ASN1387 0 0 0 0 0 5 0 0 0 0 (383) VAL1900 0 0 0 0 0 2 0 0 0 0 (385) TYR1902 0 0 0 0 0 26 0 0 0 0 (387) HIS1904 0 0 0 0 0 11 0 0 0 0 prot.sequence scrcegpfythlgagpnvaaireimeerfgqkgkairierviytgkegkssqgcpiakwvvrrssseekllclvreraghtceaavivililvwegiplsladklyseltetlrkygtltnrrcalneertcacqgldpetcgasfsfgcsWsMYYngckfaRskiprkfkllgddpkeeekleshlqnlstlmaptykklapdaynnqieyehrapecrlglkegrpfsgvtacldfcahahrdlhnmqngstlvctltrednrefggkpedeqlhvlplykvsdvdefgsveaqeekkrsgaiqvlssfrrkvrmlaepvktgsdevwsdseqsfldpdiggvavapthgsiliecakrelhattplknpnrnhptrislvfyqhksmnepkhglalweakmaek >4noe_A: title=CRYSTAL STRUCTURE OF DDRB BOUND TO 30B SSDNA organism=Deinococcus radiodurans DNA sequence DT(F1) DT(F2) DG(F3) DC(F4) DG(F5) DC(F6) DT(F7) DT(F8) DG(F9) DC(F10) DG(F11) DC(F12) DT(F13) DT(F14) DG(F15) DC(F16) DG(F17) DC(F18) DT(F19) DT(F20) DG(F21) DC(F22) DG(F23) DC(F24) DT(F25) DT(F26) DG(F27) DC(F28) DG(F29) DC(F30) chainA ( 81) ARG85 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LEU87 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) LEU95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 93) LEU97 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 94) PRO98 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ALA100 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LYS102 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) SER104 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) GLU117 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ALA119 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ILE123 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) TYR125 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ARG132 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlqiefitdlgarvtvnvehesrlldvqrhygrlgwtsgeipsggyqfpieneadfdwsligarkwkeelvihrghayrrReLeavdsrkLkLPaAiKySrgakvsdpqhvrEkAdgdIeYvslaifRggkrqeryavp >4noe_ABCDE: title=CRYSTAL STRUCTURE OF DDRB BOUND TO 30B SSDNA organism=Deinococcus radiodurans DNA sequence DT(F1) DT(F2) DG(F3) DC(F4) DG(F5) DC(F6) DT(F7) DT(F8) DG(F9) DC(F10) DG(F11) DC(F12) DT(F13) DT(F14) DG(F15) DC(F16) DG(F17) DC(F18) DT(F19) DT(F20) DG(F21) DC(F22) DG(F23) DC(F24) DT(F25) DT(F26) DG(F27) DC(F28) DG(F29) DC(F30) chainA ( 81) ARG85 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LEU87 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) LEU95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 93) LEU97 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 94) PRO98 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ALA100 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LYS102 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) SER104 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) GLU117 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ALA119 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ILE123 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) TYR125 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ARG132 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 79) ARG85 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) LEU87 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) LEU97 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) PRO98 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ALA100 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) LYS102 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) SER104 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLU117 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ALA119 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ILE123 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR125 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ARG132 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 80) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LEU87 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) LEU97 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) PRO98 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ALA100 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) LYS102 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) SER104 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLU117 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ALA119 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ILE123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR125 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ARG132 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 81) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 ( 83) LEU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 ( 87) LEU97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 ( 88) PRO98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 90) ALA100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 92) LYS102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 ( 94) SER104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (107) GLU117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (109) ALA119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (110) ASP120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (113) ILE123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 (115) TYR125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 (122) ARG132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 chainE ( 87) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 89) LEU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 ( 96) LEU97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 ( 97) PRO98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 99) ALA100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (101) LYS102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 (103) SER104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (116) GLU117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (118) ALA119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (122) ILE123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 (124) TYR125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0 0 (129) ILE130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (131) ARG132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 prot.sequence mlqiefitdlgarvtvnvehesrlldvqrhygrlgwtsgeipsggyqfpieneadfdwsligarkwkeelvihrghayrrReLeavdsrkLkLPaAiKySrgakvsdpqhvrEkAdgdIeYvslaifRggkrqeryavp/mlqiefitdlgarvtvnvehesrlldvqrhygrlgwtsgeipsggyqfpieneadfdwsligarkwelvihrghayrrReLeavdlkLPaAiKySrgakvsdpqhvrEkAdgdIeYvslaifRggkrqeryavp/tmlqiefitdlgarvtvnvehesrlldvqrhygrlgwtsgeipsggyqfpieneadfdwsligarkwelvihrghayrrReLeavdkLPaAiKySrgakvsdpqhvrEkAdgdIeYvslaifRggkrqeryavp/ftmlqiefitdlgarvtvnvehesrlldvqrhygrlgwtsgeipsggyqfpieneadfdwsligarkwelvihrghayrrReLeavLPaAiKySrgakvsdpqhvrEkADgdIeYvslaifRggkrqeryavp/ftmlqiefitdlgarvtvnvehesrlldvqrhygrlgwtsgeipsggyqfpieneadfdwsligarkwkspegeelvihrghayrrReLeavdlkLPaAiKySrgakvsdpqhvrEkAdgdIeYvslaIfRggkrqeryavp >4nqa_AB: title=CRYSTAL STRUCTURE OF LIGANDED HRXR-ALPHA/HLXR-BETA HETERODIMER ON DNA organism=HOMO SAPIENS DNA sequence DA(E503):DT(F518) DG(E504):DC(F517) DG(E505):DC(F516) DT(E506):DA(F515) DC(E507):DG(F514) DA(E508):DT(F513) DC(E509):DG(F512) DT(E510):DA(F511) DT(E511):DA(F510) DC(E512):DG(F509) DA(E513):DT(F508) DG(E514):DC(F507) DG(E515):DC(F506) DT(E516):DA(F505) DC(E517):DG(F504) DA(E518):DT(F503) chainA ( 26) GLU153 0 0 11 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS156 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) LYS160 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG161 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 chainB ( 4) PRO77 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 ( 32) GLU105 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 ( 35) LYS108 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 ( 39) ARG112 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 ( 40) ARG113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 prot.sequence asftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeerqrgssanedmpverileaelavepktetyeanmglnpsspndpvtnicqaadkqlftlvewakriphfselplddqvillragwnelliasfshrsiavkdgillatglhvhrnsahsagvgaifdrvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmemle/kkgPapkmlghelcrvcgdkasgfhynvlscEgcKgffRRsvvrggarryacrgggtcqmdafmrrkcqqcrlrkckeagmreqcvlseeqirkkkirkqqqqesqsqsqspvgpqgsssqgsgegegvqltaaqelmiqqlvaaqlqcnkrsfsdqpkvtpwplgadpqsrdarqqrfahftelaiisvqeivdfakqvpgflqlgredqiallkastieimlletarrynhetecitflkdftyskddfhraglqvefinpifefsramrrlglddaeyalliainifsadrpnvqepgrvealqqpyveallsytrikrpqdqlrfprmlmklvslrtlssvhseqvfalrlqdkklppllseiwd >4nqa_HI: title=CRYSTAL STRUCTURE OF LIGANDED HRXR-ALPHA/HLXR-BETA HETERODIMER ON DNA organism=HOMO SAPIENS DNA sequence DT(M503):DA(L518) DG(M504):DC(L517) DA(M505):DT(L516) DC(M506):DG(L515) DC(M507):DG(L514) DT(M508):DA(L513) DG(M509):DC(L512) DA(M510):DT(L511) DA(M511):DT(L510) DG(M512):DC(L509) DT(M513):DA(L508) DG(M514):DC(L507) DA(M515):DT(L506) DC(M516):DG(L505) DC(M517):DG(L504) DT(M518):DA(L503) chainH ( 27) GLU153 0 0 0 0 0 0 0 0 0 0 0 0 4 12 1 0 ( 30) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 ( 34) LYS160 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 ( 35) ARG161 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 chainI ( 4) ALA78 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 5) PRO79 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 31) GLU105 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) LYS108 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 ( 38) ARG112 0 0 1 10 11 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG113 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence masftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeerqrgkdrnenevestssanedmpverileaelavepktetndpvtnicqaadkqlftlvewakriphfselplddqvillragwnelliasfshrsiavkdgillatglhvhrnsahsagvgaifdrvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmemleap/kgpAPkmlghelcrvcgdkasgfhynvlscEgcKgffRRsvvrggarryacrgggtcqmdafmrrkcqqcrlrkckeagmreqcvlseeqirkkkirkqqqqesqsqsqspvgpqgssssasgpgaspggseagsqgsgegegvqltaaqelmiqqlvaaqlqcnkrsfsdqpkvtpwplgadpqsrdarqqrfahftelaiisvqeivdfakqvpgflqlgredqiallkastieimlletarrynhetecitflkdftyskddfhraglqvefinpifefsramrrlglddaeyalliainifsadrpnvqepgrvealqqpyveallsytrikrpqdqlrfprmlmklvslrtlssvhseqvfalrlqdkklppllseiwdv >4nqa_I:Nuclear_receptor_ligand-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF LIGANDED HRXR-ALPHA/HLXR-BETA HETERODIMER ON DNA organism=HOMO SAPIENS DNA sequence DT(M503):DA(L518) DG(M504):DC(L517) DA(M505):DT(L516) DC(M506):DG(L515) DC(M507):DG(L514) DT(M508):DA(L513) DG(M509):DC(L512) DA(M510):DT(L511) DA(M511):DT(L510) DG(M512):DC(L509) DT(M513):DA(L508) DG(M514):DC(L507) DA(M515):DT(L506) DC(M516):DG(L505) DC(M517):DG(L504) DT(M518):DA(L503) chainI ( 4) ALA78 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 5) PRO79 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 31) GLU105 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) LYS108 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 ( 38) ARG112 0 0 1 10 11 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG113 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kgpAPkmlghelcrvcgdkasgfhynvlscEgcKgffRRsvvrggarryacrgggtcqmdafmrrkcqqcrlrkckeagmreqcvlseeqirkkkirkqqqqesqsqsqspvgpqgssssasgpgaspggseagsqgsgegegvqltaaqelmiqqlvaaqlqcnkrsfsdqpkvtpwplgadpqsrdarqqrfahftelaiisvqeivdfakqvpgflqlgredqiallkastieimlletarrynhetecitflkdftyskddfhraglqvefinpifefsramrrlglddaeyalliainifsadrpnvqepgrvealqqpyveallsytrikrpqdqlrfprmlmklvslrtlssvhseqvfalrlqdkklppllseiwdv >4nrw_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain; title=MVNEI1-G86D organism=Acanthamoeba polyphaga mimivirus DNA sequence DG(C1):DC(D26) DT(C2):DA(D25) DA(C3):DT(D24) DG(C4):DC(D23) DA(C5):DT(D22) DC(C6):DG(D21) DC(C7):3DR(D20) DT(C8):DA(D19) DG(C9):DC(D18) DG(C10):DC(D17) DA(C11):DT(D16) DC(C12):DG(D15) DG(C13):DC(D14) chainA ( 83) LEU84 0 0 0 0 0 24 0 0 0 0 0 0 0 (112) MET113 0 0 0 0 0 0 0 2 0 0 0 0 0 (113) ARG114 0 0 0 0 0 0 14 41 0 0 0 0 0 (115) PHE116 0 0 0 0 0 96 12 0 0 0 0 0 0 (271) SER272 0 9 6 0 0 0 0 0 0 0 0 0 0 (273) LYS274 0 0 0 3 1 0 0 0 0 0 0 0 0 (274) ASN275 0 0 3 12 3 0 0 0 0 0 0 0 0 (276) ARG277 0 0 0 0 1 6 0 0 0 0 0 0 0 prot.sequence pegpevaltadilekyfkgktleyidfisgrysksepegyddfianlplkvsnvdtkgkflwfelfdpndksnkwyiwntfgLtdmwslfeakytravlsfdnelmayfsdMRnFgtfkfsnsekelkrklnelgpdflknddidiskikkykqpivallmdqkkigsglgnylvaeilyrakidphklgsnltdqeienlwywikyetklaydsnhigymvnlenesskigrknyhpnihptekefdflvyrkkkdpngnkviadkiigSgKNkRttywapaiq >4nw3_A: title=CRYSTAL STRUCTURE OF MLL CXXC DOMAIN IN COMPLEX WITH A CPG DNA organism=HOMO SAPIENS DNA sequence DG(B1):DC(C12) DC(B2):DG(C11) DC(B3):DG(C10) DA(B4):DT(C9) DT(B5):DA(C8) DC(B6):DG(C7) DG(B7):DC(C6) DA(B8):DT(C5) DT(B9):DA(C4) DG(B10):DC(C3) DG(B11):DC(C2) DC(B12):DG(C1) chainA ( 36) LYS1185 0 0 0 0 0 0 0 1 0 0 0 0 ( 37) LYS1186 0 0 0 0 6 13 9 0 0 0 0 0 ( 38) GLN1187 0 0 0 0 0 8 7 3 0 0 0 0 prot.sequence rrsrrcgqcpgcqvpedcgvctncldkpkfggrniKKQcckmrkcqnlqwm >4nxz_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA WITH O6MG IN THE TEMPLATE BASE OPPOSITE TO INCOMING NON-HYDROLYZABLE TTP WITH MANGANESE IN THE ACTIVE SITE organism=Homo sapiens DNA sequence DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 2 6 0 0 0 0 0 0 0 (262) TYR271 8 0 0 0 0 0 0 0 0 0 (274) ARG283 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4ny8_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA WITH O6MG IN THE TEMPLATE BASE OPPOSITE TO INCOMING NON-HYDROLYZABLE CTP WITH MANGANESE IN THE ACTIVE SITE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 24) HIS34 38 0 0 0 0 ( 25) LYS35 9 0 0 0 0 ( 28) ALA38 5 0 0 0 0 prot.sequence lnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4o0i_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS WITH 2'-MESE-ARABINO-GUANOSINE DERIVATIZED DNA organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DC(B5):DG(C13) DG(B6):DC(C12) DA(B7):DT(C11) DA(B8):DT(C10) DT(B9):DA(C9) DT(B10):DA(C8) DC(B11):DG(C7) DG(B12):DC(C6) DC(B13):DC(C4) chainA (286) LYS582 0 0 0 0 0 3 6 0 0 (326) ASN622 0 0 0 0 0 0 0 1 0 (329) ASN625 0 0 0 0 0 0 3 10 1 (333) ARG629 0 0 0 0 0 0 0 0 8 (414) PHE710 0 0 0 0 0 0 0 0 4 (418) TYR714 0 0 0 0 0 0 0 0 6 prot.sequence skmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgrlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4o3m_A:P-loop_containing_nucleoside_triphosphate_hydrolases;HRDC-like; title=TERNARY COMPLEX OF BLOOM'S SYNDROME HELICASE organism=Homo sapiens DNA sequence DG(T4):DC(P13) DG(T5):DC(P12) DA(T6):DT(P11) DT(T7):DA(P10) DC(T8):DG(P9) DT(T9):DA(P8) DC(T10):DG(P7) DG(T11):DC(P6) DA(T12):DT(P5) DC(T13):DG(P4) DG(T14):DC(P3) chainA (457) SER1123 0 0 0 0 0 1 0 0 0 0 0 (496) ASN1162 0 0 0 0 0 0 0 0 0 0 2 (498) ASN1164 0 0 0 0 0 0 0 0 0 0 34 (500) GLN1166 0 0 0 0 0 0 0 0 0 5 9 prot.sequence kherfqslsfphtkemmkifhkkfglhnfrtnqleainaallgedcfilmptgggkslcyqlpacvspgvtvvisplrslivdqvqkltsldipatyltgdktdseatniylqlskkdpiikllyvtpekicasnrlistlenlyerkllarfvideahrqdykrmnmlrqkfpsvpvmaltatanprvqkdiltqlkilrpqvfsmsfnrhnlkyyvlpkkpkkvafdclewirkhhpydsgiiyclsrrecdtmadtlqrdglaalayhaglsdsardevqqkwinqdgcqvicatiafgmgidkpdvrfvihaslpksvegyyqesgragrdgeishcllfytyhdvtrlkrlimmekdhtrethfnnlysmvhycenitecrriqllayfgengfnpdfckkhpdvscdncckyktrdvtddvksivrfvqehspsgrftmnmlvdiflgskSakiqsgifgkgsaysrhnaerlfkklildkildedlyiNaNdQaiayvmlgnkaqtvlngnlkvdfmetenkvsqreemvkkclgeltevckslgkvfgvhyfnifntvtlkklaeslssdpevllqidgvtedklekygaevisvlqkysewtsp >4o3n_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA IN TERNARY COMPLEX WITH NATIVE DNA AND INCOMING NUCLEOTIDE (DCP) organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (376) LEU378 0 0 0 0 0 2 3 0 (380) ARG382 0 0 17 10 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4o3o_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN POLYMERASE ETA INSERTING DATP OPPOSITE AN 8-OXOG CONTAINING DNA TEMPLATE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (321) SER322 0 2 0 0 0 0 0 0 (377) LEU378 0 3 2 0 0 0 0 0 (381) ARG382 0 0 0 0 9 18 0 0 (422) PHE423 0 1 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpttvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >4o3p_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN POLYMERASE ETA INSERTING DCTP OPPOSITE AN 8-OXOG CONTAINING DNA TEMPLATE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (321) SER322 1 2 0 0 0 0 0 0 (377) LEU378 0 4 2 0 0 0 0 0 (381) ARG382 0 0 0 0 10 18 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpttvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4o3q_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN POLYMERASE ETA INSERTING DGTP OPPOSITE AN 8-OXOG CONTAINING DNA TEMPLATE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 64) ARG61 20 0 0 0 0 0 0 0 (320) SER322 2 4 0 0 0 0 0 0 (376) LEU378 0 8 2 0 0 0 0 0 (380) ARG382 0 0 0 0 11 19 0 0 (419) MET421 0 1 0 0 0 0 0 0 (421) PHE423 0 2 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltMlFlcatkfsas >4o3r_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN POLYMERASE ETA EXTENDING AN 8-OXOG DNA LESION: POST INSERTION OF 8-OXOG-DA PAIR organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DA(P8):DG(T4) chainA ( 41) GLN38 0 0 0 0 0 0 0 6 ( 50) ILE48 0 0 0 0 0 0 0 5 (319) SER322 0 0 0 0 0 0 1 0 (379) ARG382 0 7 7 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQkswkgggiIavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4o3s_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN POLYMERASE ETA EXTENDING AN 8-OXOG DNA LESION: POST INSERTION OF 8-OXOG-DC PAIR organism=Homo sapiens DNA sequence DG(T4):DC(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 38) GLN38 9 0 0 0 0 0 0 0 ( 48) ILE48 6 0 0 0 0 0 0 0 (317) SER322 0 1 0 0 0 0 0 0 (373) LEU378 0 0 1 0 0 0 0 0 (377) ARG382 0 0 0 0 0 2 0 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4o5c_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE COMPLEXED WITH N7-MG AS THE TEMPLATE BASE IN A 1-NUCLEOTIDE GAPPED DNA organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 36 0 0 0 0 ( 29) LYS35 9 0 0 0 0 ( 32) ALA38 4 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4o5e_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE COMPLEXED WITH N7MG IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE TTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 36 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 4 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4o5k_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE COMPLEXED WITH N7MG IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE CTP organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DA(P10):DT(T7) chainA (225) LYS234 0 0 0 0 0 0 0 6 1 0 (262) TYR271 0 0 0 0 0 0 0 0 0 8 (274) ARG283 0 0 0 0 0 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4o6a_A: title=MOUSE CYCLIC GMP-AMP SYNTHASE (CGAS) IN COMPLEX WITH DNA organism=Mus musculus DNA sequence DA(D2):DT(E17) DA(D3):DT(E16) DT(D4):DA(E15) DT(D5):DA(E14) DG(D6):DC(E13) DC(D7):DG(E12) DC(D8):DG(E11) DG(D9):DC(E10) DA(D10):DT(E9) DA(D11):DT(E8) DG(D12):DC(E7) DA(D13):DT(E6) DC(D14):DG(E5) DG(D15):DC(E4) chainA ( 16) ARG161 0 0 0 0 0 0 0 0 0 1 2 0 0 0 prot.sequence mpdklkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkriprgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdk >4o9m_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA COMPLEXED WITH ADENYLATED TETRAHYDROFURAN (ABASIC SITE) CONTAINING DNA organism=Homo sapiens DNA sequence DG(C1):DC(B16) DC(C2):DG(B15) DT(C3):DA(B14) DG(C4):DC(B13) DA(C5):DT(B12) DT(C6):DA(B11) DG(C7):DC(B10) DC(C8):DG(B9) DG(C9):DC(B8) DC(C10):DG(B7) DC(C11):DA(B6) chainA (225) LYS234 0 0 0 0 0 0 0 6 1 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 0 14 (267) ASP276 0 0 0 0 0 0 0 0 0 0 14 (270) ASN279 0 0 0 0 0 0 0 0 0 0 4 (271) LYS280 0 0 0 0 0 0 0 0 0 0 2 (274) ARG283 0 0 0 0 0 0 0 0 0 0 3 prot.sequence pqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNKnmRahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4ofa_A:DNA-glycosylase; title=STRUCTURAL BASIS FOR THYMINE GLYCOSYLASE ACTIVITY ON T:O6-METHYLG MISMATCH BY METHYL-CPG BINDING DOMAIN PROTEIN 4: IMPLICATIONS FOR ROLES OF ARG468 IN MISMATCH RECOGNITION AND CATALYSIS organism=Homo sapiens DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DT(D3):DA(C10) DG(D4):DC(C9) DC(D5):DG(C8) DG(D6):DT(C7) DC(D7):DG(C6) DG(D8):DC(C5) DC(D9):DG(C4) DT(D10):DA(C3) DG(D11):DC(C2) DG(D12):DC(C1) chainA ( 10) LEU447 0 0 0 0 0 6 0 0 0 0 0 0 ( 11) VAL448 0 0 0 0 0 3 0 0 0 0 0 0 ( 12) GLN449 0 0 0 0 0 11 0 0 0 0 0 0 ( 29) LEU466 0 0 0 0 0 9 0 0 0 0 0 0 ( 30) ASN467 0 0 0 0 4 0 0 0 0 0 0 0 ( 31) ARG468 0 0 0 0 30 4 9 0 0 0 0 0 ( 32) THR469 0 0 0 0 0 4 1 0 0 0 0 0 ( 71) LEU508 0 0 0 0 14 24 0 0 0 0 0 0 ( 74) LEU511 0 0 0 1 4 0 0 0 0 0 0 0 ( 75) ARG512 0 0 0 0 0 1 0 0 0 0 0 0 (103) TYR540 0 0 0 0 0 9 0 0 0 0 0 0 (123) ASN560 0 0 0 0 0 1 0 0 0 0 0 0 (125) LYS562 0 0 0 0 0 19 0 0 0 0 0 0 prot.sequence wtpprspfnLVQetlfhdpwklliatifLNRTSgkmaipvlwkflekypsaevartadwrdvsellkplgLydLRaktivkfsdeyltkqwkypielhgigkYgndsyrifcvnewkqvhpeNhKlnkyhdwlwenheklsl >4ofe_A:DNA-glycosylase; title=STRUCTURAL BASIS FOR THYMINE GLYCOSYLASE ACTIVITY ON T:O6-METHYLG MISMATCH BY METHYL-CPG BINDING DOMAIN PROTEIN 4: IMPLICATIONS FOR ROLES OF ARG468 IN MISMATCH RECOGNITION AND CATALYSIS organism=Homo sapiens DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DT(D3):DA(C10) DG(D4):DC(C9) DC(D5):DG(C8) DG(D6):DT(C7) DC(D7):DG(C6) DG(D8):DC(C5) DC(D9):DG(C4) DT(D10):DA(C3) DG(D11):DC(C2) DG(D12):DC(C1) chainA ( 10) LEU447 0 0 0 0 0 6 0 0 0 0 0 0 ( 11) VAL448 0 0 0 0 0 2 0 0 0 0 0 0 ( 12) GLN449 0 0 0 0 0 11 0 0 0 0 0 0 ( 29) LEU466 0 0 0 0 0 8 0 0 0 0 0 0 ( 30) ASN467 0 0 0 0 4 0 0 0 0 0 0 0 ( 31) LYS468 0 0 0 0 34 5 4 0 0 0 0 0 ( 32) THR469 0 0 0 0 0 4 1 0 0 0 0 0 ( 71) LEU508 0 0 0 0 14 23 0 0 0 0 0 0 ( 74) LEU511 0 0 0 1 6 0 0 0 0 0 0 0 ( 75) ARG512 0 0 0 0 0 1 0 0 0 0 0 0 (103) TYR540 0 0 0 0 0 9 0 0 0 0 0 0 (123) ASN560 0 0 0 0 0 1 0 0 0 0 0 0 (125) LYS562 0 0 0 0 0 19 0 0 0 0 0 0 (126) LEU563 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence wtpprspfnLVQetlfhdpwklliatifLNKTSgkmaipvlwkflekypsaevartadwrdvsellkplgLydLRaktivkfsdeyltkqwkypielhgigkYgndsyrifcvnewkqvhpeNhKLnkyhdwlwenheklsl >4ofh_A:DNA-glycosylase; title=STRUCTURAL BASIS FOR THYMINE GLYCOSYLASE ACTIVITY ON T:O6-METHYLG MISMATCH BY METHYL-CPG BINDING DOMAIN PROTEIN 4: IMPLICATIONS FOR ROLES OF ARG468 IN MISMATCH RECOGNITION AND CATALYSIS organism=Homo sapiens DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DT(D3):DA(C10) DG(D4):DC(C9) DC(D5):DG(C8) 6OG(D6):DT(C7) DC(D7):DG(C6) DG(D8):DC(C5) DC(D9):DG(C4) DT(D10):DA(C3) DG(D11):DC(C2) DG(D12):DC(C1) chainA ( 10) LEU447 0 0 0 0 0 7 0 0 0 0 0 0 ( 11) VAL448 0 0 0 0 0 3 0 0 0 0 0 0 ( 12) GLN449 0 0 0 0 0 11 0 0 0 0 0 0 ( 29) LEU466 0 0 0 0 0 11 0 0 0 0 0 0 ( 30) ASN467 0 0 0 0 4 0 0 0 0 0 0 0 ( 31) ARG468 0 0 0 0 30 7 9 0 0 0 0 0 ( 32) THR469 0 0 0 0 0 2 0 0 0 0 0 0 ( 71) LEU508 0 0 0 0 14 21 0 0 0 0 0 0 ( 74) LEU511 0 0 0 1 6 0 0 0 0 0 0 0 ( 75) ARG512 0 0 0 0 0 1 0 0 0 0 0 0 (103) TYR540 0 0 0 0 0 9 0 0 0 0 0 0 (123) ASN560 0 0 0 0 0 1 0 0 0 0 0 0 (125) LYS562 0 0 0 0 0 7 0 0 0 0 0 0 prot.sequence wtpprspfnLVQetlfhdpwklliatifLNRtsgkmaipvlwkflekypsaevartadwrdvsellkplgLydLraktivkfsdeyltkqwkypielhgigkYgndsyrifcvnewkqvhpeNhKlnkyhdwlwenhekls >4oin_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX SOAKED WITH GE23077 organism=THERMUS THERMOPHILUS DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) chainC (415) GLU421 12 0 0 0 0 0 0 0 0 0 (416) ARG422 6 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask >4oin_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX SOAKED WITH GE23077 organism=THERMUS THERMOPHILUS DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) chainC (415) GLU421 12 0 0 0 0 0 0 0 0 0 (416) ARG422 6 0 0 0 0 0 0 0 0 0 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvaPGdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqlitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >4oio_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS PRE-INSERTION SUBSTRATE COMPLEX FOR DE NOVO TRANSCRIPTION INITIATION organism=THERMUS THERMOPHILUS DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) DG(G14):DG(H14) DT(G15):DT(H13) DC(G16):DC(H12) DG(G17):DG(H11) DA(G18):DA(H10) DG(G19):DG(H9) chainC (135) ARG142 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 (159) PRO166 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (164) TRP171 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 (180) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (236) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 (249) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 (318) ILE325 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (319) ASP326 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (324) ARG331 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (411) LEU418 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (414) GLU421 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (415) ARG422 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 (419) ASP426 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (420) VAL427 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 chainD (489) LYS491 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (703) ALA705 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (704) PRO706 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chainF ( 2) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 5) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (244) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (247) GLU324 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 4 (249) ASP326 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 8 (250) SER327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (255) PHE332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplPkrgpWidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavaYvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtrERagfDVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarraKarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqptrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmrqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieea/sDpvRqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdEkDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdf >4oio_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS PRE-INSERTION SUBSTRATE COMPLEX FOR DE NOVO TRANSCRIPTION INITIATION organism=THERMUS THERMOPHILUS DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) DG(G14):DG(H14) DT(G15):DT(H13) DC(G16):DC(H12) DG(G17):DG(H11) DA(G18):DA(H10) DG(G19):DG(H9) chainF ( 2) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 5) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (244) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (247) GLU324 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 4 (249) ASP326 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 8 (250) SER327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (255) PHE332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 prot.sequence sDpvRqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdEkDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdf >4oip_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX SOAKED WITH GE23077, ATP, AND CMPCPP organism=THERMUS THERMOPHILUS DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (415) GLU421 0 0 0 0 0 0 0 0 0 1 (416) ARG422 0 0 0 0 0 0 0 0 0 4 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvaPGdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >4oiq_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX SOAKED WITH GE23077 AND RIFAMPICIN organism=THERMUS THERMOPHILUS DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (415) GLU421 0 0 0 0 0 0 0 0 0 13 (416) ARG422 0 0 0 0 0 0 0 0 0 3 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvaPGdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >4oir_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX SOAKED WITH GE23077 AND RIFAMYCIN SV organism=THERMUS THERMOPHILUS DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) chainC (415) GLU421 29 0 0 0 0 0 0 0 0 0 (416) ARG422 7 0 0 0 0 0 0 0 0 0 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvaPGdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >4ol8_AB:DNA/RNA_polymerases; title=TY3 REVERSE TRANSCRIPTASE BOUND TO DNA/RNA organism=Saccharomyces cerevisiae DNA sequence DA(D33) DT(D34) DC(D35) DT(D36) DT(D37) DC(D38) DC(D39) DT(D40) DC(D41) DT(D42) DC(D43) DT(D44) DC(D45) DT(D46) DC(D47) chainA (124) TYR156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (153) PHE185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (179) TYR211 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (180) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (256) GLN290 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (263) ASN297 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainB prot.sequence pvwlqqkyreiirndlpppvkhdieikpgarlprlqpyhvtekneqeinkivqklldnkfivpskspcsspvvlvpktfrlcvdyrtlnkatisdpfplpridnllsrignaqifttldlhsgYhqipmepkdryktafvtpsgkyeytvmpFglvnapstfarymadtfrdlrfvnvYLddilifsespeehwkhldtvlerlknenlivkkkkckfeeteflgysigiqkiaplqhkcaairdfptpktvkqaQrflgmiNyyrrfipncskiaqpitekqdkaidklkdapfnnkanyrlttdaskdgigavleevdnknklvgvvgyfsksleypagelellgiikalhhfrymlhgkhftlrtnharrvqrwlddlatydftley/kdtfctlpvwlqqkyreiirndlpprpapvkhdieikpgarlprlqpyhvtekneqeinkivqklldnkfivpskspcsspvvlvpkkdgtfrlcvdyrtlnkatisdpfplpridnllsrigNaqifttldlhsgyhqipmepkdryktafVtpsgkyeytvmpfglvnapstfaryMAdtfrdlrfvnvylddilifsespeehwkhldtvlerlknenlivkkkkckfaseeteflgysigiqkiaplqhkcAairdfpTpktvkqaqrflgminyyrrfipncskiaqpiqlficdksqwtekqdkaidklkdalcnspvlvpfnnkanyrlttdaskdgigavleevdnknklvgvvgyfsksleypagelellgiikalhhfrymlhgkhftlrtnhisllslqnkneparrvqrwlddlatydftleylagpknvvadaisravy >4ol8_E:DNA/RNA_polymerases; title=TY3 REVERSE TRANSCRIPTASE BOUND TO DNA/RNA organism=Saccharomyces cerevisiae DNA sequence DC(H32) DA(H33) DT(H34) DC(H35) DT(H36) DT(H37) DC(H38) DC(H39) DT(H40) DC(H41) DT(H42) DC(H43) DT(H44) DC(H45) DT(H46) DC(H47) chainE (125) TYR156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (154) PHE185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (180) TYR211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (181) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (264) ASN297 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence pvwlqqkyreiirndlpprpvkhdieikpgarlprlqpyhvtekneqeinkivqklldnkfivpskspcsspvvlvpgtfrlcvdyrtlnkatisdpfplpridnllsrignaqifttldlhsgYhqipmepkdryktafvtpsgkyeytvmpFglvnapstfarymadtfrdlrfvnvYLddilifsespeehwkhldtvlerlknenlivkkkkckfaseeteflgysigiqkiaphkcaairdfptpktvkqaqrflgmiNyyrrfipncskiaqpitekqdkaidklkspvlvpfnyrlttdaskdgigavlevgyfskslesaqgelellgiikalhhfrymlhgkhftlrtnhieparrvqrwlddlatydftle >4ol8_EF:DNA/RNA_polymerases; title=TY3 REVERSE TRANSCRIPTASE BOUND TO DNA/RNA organism=Saccharomyces cerevisiae DNA sequence DC(H32) DA(H33) DT(H34) DC(H35) DT(H36) DT(H37) DC(H38) DC(H39) DT(H40) DC(H41) DT(H42) DC(H43) DT(H44) DC(H45) DT(H46) DC(H47) chainF chainE (125) TYR156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (154) PHE185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (180) TYR211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (181) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (264) ASN297 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence pvwlqqkyreiirndlpprpvkhdieikpgarlprlqpyhvtekneqeinkivqklldnkfivpskspcsspvvlvpgtfrlcvdyrtlnkatisdpfplpridnllsrignaqifttldlhsgYhqipmepkdryktafvtpsgkyeytvmpFglvnapstfarymadtfrdlrfvnvYLddilifsespeehwkhldtvlerlknenlivkkkkckfaseeteflgysigiqkiaphkcaairdfptpktvkqaqrflgmiNyyrrfipncskiaqpitekqdkaidklkspvlvpfnyrlttdaskdgigavlevgyfskslesaqgelellgiikalhhfrymlhgkhftlrtnhieparrvqrwlddlatydftle/kdtfctlpvwlqqkyreiirndlpprpapvkhdieikpgarlprlqpyhvtekneqeinkivqklldnkfivpskspcsspvvlvpkkdgtfrlcvdyrtlnkatisdpfplpridnllsrignAqifttldlhsgyhqipmepkdryktafvTpsgkyeytvmpfglvnapstfarymADtfrdlrfvnvylddilifsespeehwkhldtvlerlknenlivkkkkckfaseeteflgysigiqkiaplqhkcaairdfptKqaqrflgminyyrrfipncskiaqptekqdkaidklkdalcnspvlvpfnnkanyrlttdaskdgigavleevdnknklvgvvgyfsksypagelellgiikalhhfrymlhgkhftlrtnhisllslqnkneparrvqrwlddlatydftleylvvadaisr >4oln_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCESTRAL STEROID RECEPTOR 1 IN COMPLEX WITH ESTROGEN RESPONSE ELEMENT DNA organism=SYNTHETIC CONSTRUCT DNA sequence DC(E1):DG(F19) DC(E2):DG(F18) DA(E3):DT(F17) DG(E4):DC(F16) DG(E5):DC(F15) DT(E6):DA(F14) DC(E7):DG(F13) DA(E8):DT(F12) DG(E9):DC(F11) DA(E10):DT(F10) DG(E11):DC(F9) DT(E12):DA(F8) DG(E13):DC(F7) DA(E14):DT(F6) DC(E15):DG(F5) DC(E16):DG(F4) DT(E17):DA(F3) DG(E18):DC(F2) DA(E19):DT(F1) chainA ( 24) GLU25 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ALA29 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) LYS32 0 0 0 1 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG33 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 chainB ( 16) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 22) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 ( 25) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 2 0 0 ( 26) ALA29 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 29) LYS32 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 4 0 0 0 ( 30) ARG33 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 prot.sequence kpkrlcqvcgdhasgfhygvwscEgcKAffKRsiqvdyvcpatnnctidkhrrkscqacrlrkclevgmt/krlcqvcgdhasgfhYgvwscEgcKAffKRsiqdyvcpatnnctidkhrrkscqacrlrkclevgmt >4oln_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCESTRAL STEROID RECEPTOR 1 IN COMPLEX WITH ESTROGEN RESPONSE ELEMENT DNA organism=SYNTHETIC CONSTRUCT DNA sequence DT(F1):DA(E19) DC(F2):DG(E18) DA(F3):DT(E17) DG(F4):DC(E16) DG(F5):DC(E15) DT(F6):DA(E14) DC(F7):DG(E13) DA(F8):DT(E12) DC(F9):DG(E11) DT(F10):DA(E10) DC(F11):DG(E9) DT(F12):DA(E8) DG(F13):DC(E7) DA(F14):DT(E6) DC(F15):DG(E5) DC(F16):DG(E4) DT(F17):DA(E3) DG(F18):DC(E2) DG(F19):DC(E1) chainB ( 16) TYR19 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU25 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS28 0 0 2 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA29 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS32 0 0 0 4 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG33 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krlcqvcgdhasgfhYgvwscEgcKAffKRsiqdyvcpatnnctidkhrrkscqacrlrkclevgmt >4omy_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF SEMET NOLR FROM SINORHIZOBIUM FREDII IN COMPLEX WITH OLIGO AT DNA organism=SINORHIZOBIUM FREDII DNA sequence DT(E3):DA(F21) DT(E4):DA(F20) DA(E5):DT(F19) DG(E6):DC(F18) DA(E7):DT(F17) DG(E8):DC(F16) DA(E9):DT(F15) DA(E10):DT(F14) DC(E11):DG(F13) DC(E12):DG(F12) DC(E13):DG(F11) DT(E14):DA(F10) DG(E15):DC(F9) DA(E16):DT(F8) DA(E17):DT(F7) DG(E18):DC(F6) DT(E19):DA(F5) DT(E20):DA(F4) DA(E21):DT(F3) DA(E22):DT(F2) chainA ( 52) SER57 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLN61 0 6 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 51) GLN56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 52) SER57 0 0 0 0 0 0 0 0 0 0 0 2 8 7 0 0 0 0 0 0 ( 55) SER60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 56) GLN61 0 0 0 0 0 0 0 0 0 0 7 5 3 0 0 0 0 0 0 0 ( 74) GLN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 prot.sequence qplspekheeaeiaagflsamanpkrllildslvkeemavgalankvglsqSalsQhlsklraqnlvstrrdaqtiyyssssdsvmkilgalseiyg/qplspekheeaeiaagflsamanpkrllildslvkeemavgalankvglsQSalSQhlsklraqnlvstrrdaQtiyyssssdsvmkilgalseiyg >4omy_CD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF SEMET NOLR FROM SINORHIZOBIUM FREDII IN COMPLEX WITH OLIGO AT DNA organism=SINORHIZOBIUM FREDII DNA sequence DT(H2):DA(G22) DT(H3):DA(G21) DA(H4):DT(G20) DA(H5):DT(G19) DC(H6):DG(G18) DT(H7):DA(G17) DT(H8):DA(G16) DC(H9):DG(G15) DA(H10):DT(G14) DG(H11):DC(G13) DG(H12):DC(G12) DG(H13):DC(G11) DT(H14):DA(G10) DT(H15):DA(G9) DC(H16):DG(G8) DT(H17):DA(G7) DC(H18):DG(G6) DT(H19):DA(G5) DA(H20):DT(G4) DA(H21):DT(G3) chainC ( 52) SER57 0 0 0 0 0 0 6 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 55) SER60 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLN61 0 0 0 0 0 0 0 3 6 10 0 0 0 0 0 0 0 0 0 0 ( 74) GLN79 0 5 14 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 52) SER57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 7 ( 56) GLN61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 7 0 ( 60) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence qplspekheeaeiaagflsamanpkrllildslvkeemavgalankvglsqSalSQhlsklraqnlvstrrdaQtiyyssssdsvmkilgalseiyg/qplspekheeaeiaagflsamanpkrllildslvkeemavgalankvglsqSalsQhlsKlraqnlvstrrdaqtiyyssssdsvmkilgalseiyg >4omy_D:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF SEMET NOLR FROM SINORHIZOBIUM FREDII IN COMPLEX WITH OLIGO AT DNA organism=SINORHIZOBIUM FREDII DNA sequence DT(G3):DA(H21) DT(G4):DA(H20) DA(G5):DT(H19) DG(G6):DC(H18) DA(G7):DT(H17) DG(G8):DC(H16) DA(G9):DT(H15) DA(G10):DT(H14) DC(G11):DG(H13) DC(G12):DG(H12) DC(G13):DG(H11) DT(G14):DA(H10) DG(G15):DC(H9) DA(G16):DT(H8) DA(G17):DT(H7) DG(G18):DC(H6) DT(G19):DA(H5) DT(G20):DA(H4) DA(G21):DT(H3) DA(G22):DT(H2) chainD ( 52) SER57 7 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLN61 0 7 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS65 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qplspekheeaeiaagflsamanpkrllildslvkeemavgalankvglsqSalsQhlsKlraqnlvstrrdaqtiyyssssdsvmkilgalseiyg >4on0_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF NOLR FROM SINORHIZOBIUM FREDII IN COMPLEX WITH OLIGO AA DNA organism=SINORHIZOBIUM FREDII DNA sequence DT(E3):DA(F21) DT(E4):DA(F20) DA(E5):DT(F19) DG(E6):DC(F18) DA(E7):DT(F17) DG(E8):DC(F16) DA(E9):DT(F15) DA(E10):DT(F14) DC(E11):DG(F13) DC(E12):DG(F12) DC(E13):DG(F11) DT(E14):DA(F10) DG(E15):DC(F9) DA(E16):DT(F8) DT(E17):DA(F7) DG(E18):DC(F6) DT(E19):DA(F5) DT(E20):DA(F4) DA(E21):DT(F3) DA(E22):DT(F2) chainA ( 50) SER55 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) SER57 5 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA58 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) SER60 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLN61 1 8 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS65 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 50) SER55 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 51) GLN56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 0 0 0 0 ( 52) SER57 0 0 0 0 0 0 0 0 0 0 0 5 8 5 0 0 0 0 0 0 ( 53) ALA58 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 55) SER60 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 ( 56) GLN61 0 0 0 0 0 0 0 0 0 0 8 6 4 1 0 0 0 0 0 0 ( 74) GLN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 3 prot.sequence qplspekheeaeiaagflsamanpkrllildslvkeemavgalankvglSqSAlSQhlsKlraqnlvstrrdaqtiyyssssdsvmkilgalseiyg/qplspekheeaeiaagflsamanpkrllildslvkeemavgalankvglSQSAlSQhlsklraqnlvstrrdaQtiyyssssdsvmkilgalseiyg >4on0_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF NOLR FROM SINORHIZOBIUM FREDII IN COMPLEX WITH OLIGO AA DNA organism=SINORHIZOBIUM FREDII DNA sequence DT(F2):DA(E22) DT(F3):DA(E21) DA(F4):DT(E20) DA(F5):DT(E19) DC(F6):DG(E18) DA(F7):DT(E17) DT(F8):DA(E16) DC(F9):DG(E15) DA(F10):DT(E14) DG(F11):DC(E13) DG(F12):DC(E12) DG(F13):DC(E11) DT(F14):DA(E10) DT(F15):DA(E9) DC(F16):DG(E8) DT(F17):DA(E7) DC(F18):DG(E6) DT(F19):DA(E5) DA(F20):DT(E4) DA(F21):DT(E3) chainB ( 50) SER55 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN56 0 0 0 0 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) SER57 0 0 0 0 0 0 5 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA58 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 55) SER60 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLN61 0 0 0 0 0 0 1 4 6 8 0 0 0 0 0 0 0 0 0 0 ( 74) GLN79 3 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qplspekheeaeiaagflsamanpkrllildslvkeemavgalankvglSQSAlSQhlsklraqnlvstrrdaQtiyyssssdsvmkilgalseiyg >4on0_CD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF NOLR FROM SINORHIZOBIUM FREDII IN COMPLEX WITH OLIGO AA DNA organism=SINORHIZOBIUM FREDII DNA sequence DT(G3):DA(H21) DT(G4):DA(H20) DA(G5):DT(H19) DG(G6):DC(H18) DA(G7):DT(H17) DG(G8):DC(H16) DA(G9):DT(H15) DA(G10):DT(H14) DC(G11):DG(H13) DC(G12):DG(H12) DC(G13):DG(H11) DT(G14):DA(H10) DG(G15):DC(H9) DA(G16):DT(H8) DT(G17):DA(H7) DG(G18):DC(H6) DT(G19):DA(H5) DT(G20):DA(H4) DA(G21):DT(H3) DA(G22):DT(H2) chainC ( 50) SER55 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) SER57 5 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA58 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) SER60 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLN61 0 7 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS65 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 51) GLN56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 0 0 0 0 ( 52) SER57 0 0 0 0 0 0 0 0 0 0 0 5 7 3 0 0 0 0 0 0 ( 53) ALA58 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 55) SER60 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 ( 56) GLN61 0 0 0 0 0 0 0 0 0 0 9 5 3 1 0 0 0 0 0 0 ( 74) GLN79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 prot.sequence qplspekheeaeiaagflsamanpkrllildslvkeemavgalankvglSqSAlSQhlsKlraqnlvstrrdaqtiyyssssdsvmkilgalseiyg/qplspekheeaeiaagflsamanpkrllildslvkeemavgalankvglsQSAlSQhlsklraqnlvstrrdaQtiyyssssdsvmkilgalseiyg >4ond_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCESTRAL STEROID RECEPTOR 2 DBD HELIX MUTANT - ERE DNA COMPLEX organism=synthetic construct DNA sequence DC(J2):DG(I18) DA(J3):DT(I17) DG(J4):DC(I16) DG(J5):DC(I15) DT(J6):DA(I14) DC(J7):DG(I13) DA(J8):DT(I12) DC(J9):DG(I11) DT(J10):DA(I10) DC(J11):DG(I9) DT(J12):DA(I8) DG(J13):DC(I7) DA(J14):DT(I6) DC(J15):DG(I5) DC(J16):DG(I4) DT(J17):DA(I3) DG(J18):DC(I2) chainA ( 22) GLU25 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS28 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA29 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG33 0 0 0 0 3 15 9 0 0 0 0 0 0 0 0 0 0 chainB ( 21) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 ( 24) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 ( 25) ALA29 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 prot.sequence qkvclicgdeasgchygvltcEgcKAffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlg/kvclicgdeasgchygvltcEgcKAffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlg >4ond_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCESTRAL STEROID RECEPTOR 2 DBD HELIX MUTANT - ERE DNA COMPLEX organism=synthetic construct DNA sequence DC(I2):DG(J18) DA(I3):DT(J17) DG(I4):DC(J16) DG(I5):DC(J15) DT(I6):DA(J14) DC(I7):DG(J13) DA(I8):DT(J12) DG(I9):DC(J11) DA(I10):DT(J10) DG(I11):DC(J9) DT(I12):DA(J8) DG(I13):DC(J7) DA(I14):DT(J6) DC(I15):DG(J5) DC(I16):DG(J4) DT(I17):DA(J3) DG(I18):DC(J2) chainB ( 21) GLU25 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS28 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ALA29 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG33 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 prot.sequence kvclicgdeasgchygvltcEgcKAffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlg >4ond_EF:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCESTRAL STEROID RECEPTOR 2 DBD HELIX MUTANT - ERE DNA COMPLEX organism=synthetic construct DNA sequence DC(L2):DG(K18) DA(L3):DT(K17) DG(L4):DC(K16) DG(L5):DC(K15) DT(L6):DA(K14) DC(L7):DG(K13) DA(L8):DT(K12) DC(L9):DG(K11) DT(L10):DA(K10) DC(L11):DG(K9) DT(L12):DA(K8) DG(L13):DC(K7) DA(L14):DT(K6) DC(L15):DG(K5) DC(L16):DG(K4) DT(L17):DA(K3) DG(L18):DC(K2) chainE ( 22) GLU25 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS28 0 4 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA29 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG33 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 chainF ( 22) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 7 10 2 0 0 ( 25) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 ( 26) ALA29 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 30) ARG33 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 prot.sequence qkvclicgdeasgchygvltcEgcKAffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtl/qkvclicgdeasgchygvltcEgcKAffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtl >4oo8_D: title=CRYSTAL STRUCTURE OF STREPTOCOCCUS PYOGENES CAS9 IN COMPLEX WITH GUIDE RNA AND TARGET DNA organism=Streptococcus pyogenes serotype M1 DNA sequence DC(F-2) DC(F-1) DA(F0) DG(F1) DC(F2) DC(F3) DA(F4) DA(F5) DG(F6) DC(F7) DG(F8) DC(F9) DA(F10) DC(F11) DC(F12) DT(F13) DA(F14) DA(F15) DT(F16) DT(F17) DT(F18) DC(F19) DC(F20) chainD ( 70) TYR72 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ARG447 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) TYR450 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (493) MET495 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (586) ASN588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (692) MET694 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (909) LYS1107 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (910) GLU1108 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrYtrrknrilylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfRipYyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfierMtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkieefdsveisgvedrfNaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfMqlihddsltfkediqkaqvdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdfysnimnffklietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKEsilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagelqkgnelalpskyvnflylashyepedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidrkrytstkevldatlihqsitglyetridlsqlg >4oor_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCESTRAL STEROID RECEPTOR 2 DNA BINDING DOMAIN IN COMPLEX WITH A STEROID RESPONSE ELEMENT organism=synthetic construct DNA sequence DC(I2):DG(J18) DA(I3):DT(J17) DG(I4):DC(J16) DA(I5):DT(J15) DA(I6):DT(J14) DC(I7):DG(J13) DA(I8):DT(J12) DG(I9):DC(J11) DA(I10):DT(J10) DG(I11):DC(J9) DT(I12):DA(J8) DG(I13):DC(J7) DT(I14):DA(J6) DT(I15):DA(J5) DC(I16):DG(J4) DT(I17):DA(J3) DG(I18):DC(J2) chainA ( 26) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 ( 27) VAL29 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 31) ARG33 0 0 0 0 0 0 0 0 0 0 14 12 2 0 0 0 0 prot.sequence pqkvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlg >4oor_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCESTRAL STEROID RECEPTOR 2 DNA BINDING DOMAIN IN COMPLEX WITH A STEROID RESPONSE ELEMENT organism=synthetic construct DNA sequence DC(I2):DG(J18) DA(I3):DT(J17) DG(I4):DC(J16) DA(I5):DT(J15) DA(I6):DT(J14) DC(I7):DG(J13) DA(I8):DT(J12) DG(I9):DC(J11) DA(I10):DT(J10) DG(I11):DC(J9) DT(I12):DA(J8) DG(I13):DC(J7) DT(I14):DA(J6) DT(I15):DA(J5) DC(I16):DG(J4) DT(I17):DA(J3) DG(I18):DC(J2) chainA ( 26) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 ( 27) VAL29 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 31) ARG33 0 0 0 0 0 0 0 0 0 0 14 12 2 0 0 0 0 chainB ( 24) LYS28 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL29 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG33 0 0 0 0 3 13 17 0 0 0 0 0 0 0 0 0 0 prot.sequence pqkvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlg/kvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtl >4oor_EF:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCESTRAL STEROID RECEPTOR 2 DNA BINDING DOMAIN IN COMPLEX WITH A STEROID RESPONSE ELEMENT organism=synthetic construct DNA sequence DC(L2):DG(K18) DA(L3):DT(K17) DG(L4):DC(K16) DA(L5):DT(K15) DA(L6):DT(K14) DC(L7):DG(K13) DA(L8):DT(K12) DC(L9):DG(K11) DT(L10):DA(K10) DC(L11):DG(K9) DT(L12):DA(K8) DG(L13):DC(K7) DT(L14):DA(K6) DT(L15):DA(K5) DC(L16):DG(K4) DT(L17):DA(K3) DG(L18):DC(K2) chainE ( 26) LYS28 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) VAL29 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG33 0 0 0 0 1 13 18 0 0 0 0 0 0 0 0 0 0 chainF ( 25) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 ( 26) VAL29 0 0 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 ( 30) ARG33 0 0 0 0 0 0 0 0 0 0 15 14 4 0 0 0 0 prot.sequence pqkvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtl/qkvclicgdeasgchygvltcgscKVffkRaveghnylcagrndciidkirrkncpacrlrkclqagmtl >4opk_C:Ribonuclease_H-like; title=BH-RNASEH:2'-SME-DNA COMPLEX organism=Bacillus halodurans DNA sequence DC(D1) DG(D2) DC(D3) DG(D4) DA(D5) DA(D6) DT(D8) DC(D9) DG(D10) DC(D11) DG(D12) chainC ( 16) ASN77 0 0 0 0 0 0 0 0 0 0 1 ( 44) ASN105 0 0 0 0 0 0 0 0 1 1 0 prot.sequence eiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsqtaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadyg >4opx_AD:ADP-ribosylation;Domain_of_polyADP-ribose_polymerase;WGR_domain-like;Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE OF HUMAN PARP-1 BOUND TO A DNA DOUBLE STRAND BREAK IN COMPLEX WITH (2R)-5-FLUORO-2-METHYL-2,3-DIHYDRO-1-BENZOFURAN-7- CARBOXAMIDE organism=HOMO SAPIENS DNA sequence DG(N1):DC(M26) DC(N2):DG(M25) DC(N3):DG(M24) DT(N4):DA(M23) DA(N5):DT(M22) DC(N6):DG(M21) DC(N7):DG(M20) DG(N8):DC(M19) DG(N9):DC(M18) DT(N10):DA(M17) DT(N11):DA(M16) DC(N12):DG(M15) DG(N13):DC(M14) DC(N14):DG(M13) DG(N15):DC(M12) DA(N16):DT(M11) DA(N17):DT(M10) DC(N18):DG(M9) DC(N19):DG(M8) DG(N20):DC(M7) DG(N21):DC(M6) DT(N22):DA(M5) DA(N23):DT(M4) DG(N24):DC(M3) DG(N25):DC(M2) DC(N26):DG(M1) chainA ( 13) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 3 0 0 ( 39) PHE44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 ( 43) VAL48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 chainD ( 13) ARG18 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE44 55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) VAL48 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaskkekdkdsklekalkaqndliwnikdelkkvcstndlkellifnkqqvpsgesaildrvadgmvfgallpceecsgqlvfksdayyctgdvtawtkcmvktqtpnrkewvtpkefreisylkklkvkkqdrifpp/dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaskkekdkdsklekalkaqndliwnikdelkkvcstndlkellifnkqqvpsgesaildrvadgmvfgallpceecsgqlvfksdayyctgdvtawtkcmvktqtpnrkewvtpkefreisylkklkvkkqdrifpp >4opx_D:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE OF HUMAN PARP-1 BOUND TO A DNA DOUBLE STRAND BREAK IN COMPLEX WITH (2R)-5-FLUORO-2-METHYL-2,3-DIHYDRO-1-BENZOFURAN-7- CARBOXAMIDE organism=HOMO SAPIENS DNA sequence DG(M1):DC(N26) DC(M2):DG(N25) DC(M3):DG(N24) DT(M4):DA(N23) DA(M5):DT(N22) DC(M6):DG(N21) DC(M7):DG(N20) DG(M8):DC(N19) DG(M9):DC(N18) DT(M10):DA(N17) DT(M11):DA(N16) DC(M12):DG(N15) DG(M13):DC(N14) DC(M14):DG(N13) DG(M15):DC(N12) DA(M16):DT(N11) DA(M17):DT(N10) DC(M18):DG(N9) DC(M19):DG(N8) DG(M20):DC(N7) DG(M21):DC(N6) DT(M22):DA(N5) DA(M23):DT(N4) DG(M24):DC(N3) DG(M25):DC(N2) DC(M26):DG(N1) chainD ( 13) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 39) PHE44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55 ( 43) VAL48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaskkekdkdsklekalkaqndliwnikdelkkvcstndlkellifnkqqvpsgesaildrvadgmvfgallpceecsgqlvfksdayyctgdvtawtkcmvktqtpnrkewvtpkefreisylkklkvkkqdrifpp >4oqa_AD:ADP-ribosylation;Domain_of_polyADP-ribose_polymerase;WGR_domain-like;Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE OF HUMAN PARP-1 BOUND TO A DNA DOUBLE STRAND BREAK IN COMPLEX WITH (2Z)-2-(2,4-DIHYDROXYBENZYLIDENE)-3-OXO-2,3-DIHYDRO-1- BENZOFURAN-7-CARBOXAMIDE organism=HOMO SAPIENS DNA sequence DG(N1):DC(M26) DC(N2):DG(M25) DC(N3):DG(M24) DT(N4):DA(M23) DA(N5):DT(M22) DC(N6):DG(M21) DC(N7):DG(M20) DG(N8):DC(M19) DG(N9):DC(M18) DT(N10):DA(M17) DT(N11):DA(M16) DC(N12):DG(M15) DG(N13):DC(M14) DC(N14):DG(M13) DG(N15):DC(M12) DA(N16):DT(M11) DA(N17):DT(M10) DC(N18):DG(M9) DC(N19):DG(M8) DG(N20):DC(M7) DG(N21):DC(M6) DT(N22):DA(M5) DA(N23):DT(M4) DG(N24):DC(M3) DG(N25):DC(M2) DC(N26):DG(M1) chainA ( 13) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 2 0 0 ( 39) PHE44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 ( 43) VAL48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 chainD ( 13) ARG18 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE44 56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) VAL48 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaskkekdkdsklekalkaqndliwnikdelkkvcstndlkellifnkqqvpsgesaildrvadgmvfgallpceecsgqlvfksdayyctgdvtawtkcmvktqtpnrkewvtpkefreisylkklkvkkqdrifpp/dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaskkekdkdsklekalkaqndliwnikdelkkvcstndlkellifnkqqvpsgesaildrvadgmvfgallpceecsgqlvfksdayyctgdvtawtkcmvktqtpnrkewvtpkefreisylkklkvkkqdrifpp >4oqb_AD:ADP-ribosylation;Domain_of_polyADP-ribose_polymerase;WGR_domain-like;Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE OF HUMAN PARP-1 BOUND TO A DNA DOUBLE STRAND BREAK IN COMPLEX WITH (2Z)-2-{4-[2-(MORPHOLIN-4-YL)ETHOXY]BENZYLIDENE}-3-OXO- 2,3-DIHYDRO-1-BENZOFURAN-7-CARBOXAMIDE organism=HOMO SAPIENS DNA sequence DG(M1):DC(N26) DC(M2):DG(N25) DC(M3):DG(N24) DT(M4):DA(N23) DA(M5):DT(N22) DC(M6):DG(N21) DC(M7):DG(N20) DG(M8):DC(N19) DG(M9):DC(N18) DT(M10):DA(N17) DT(M11):DA(N16) DC(M12):DG(N15) DG(M13):DC(N14) DC(M14):DG(N13) DG(M15):DC(N12) DA(M16):DT(N11) DA(M17):DT(N10) DC(M18):DG(N9) DC(M19):DG(N8) DG(M20):DC(N7) DG(M21):DC(N6) DT(M22):DA(N5) DA(M23):DT(N4) DG(M24):DC(N3) DG(M25):DC(N2) DC(M26):DG(N1) chainA ( 13) ARG18 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE44 55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) VAL48 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 13) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 39) PHE44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56 ( 43) VAL48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaskkekdkdsklekalkaqndliwnikdelkkvcstndlkellifnkqqvpsgesaildrvadgmvfgallpceecsgqlvfksdayyctgdvtawtkcmvktqtpnrkewvtpkefreisylkklkvkkqdrifpp/dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaskkekdkdsklekalkaqndliwnikdelkkvcstndlkellifnkqqvpsgesaildrvadgmvfgallpceecsgqlvfksdayyctgdvtawtkcmvktqtpnrkewvtpkefreisylkklkvkkqdrifpp >4osh_B:Thiolase-like; title=CRYSTAL STRUCTURE OF THE TAL EFFECTOR DHAX3 WITH NI RVD AT 2.2 ANGSTROM RESOLUTION organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DA(H1):DT(G15) DG(H2):DC(G14) DA(H3):DT(G13) DG(H4):DC(G12) DA(H5):DT(G11) DT(H6):DA(G10) DA(H7):DT(G9) DA(H8):DT(G8) DA(H9):DT(G7) DG(H10):DC(G6) DG(H11):DC(G5) DG(H12):DC(G4) DA(H13):DT(G3) DC(H14):DG(G2) chainB ( 34) ARG266 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 69) ASP301 0 0 0 0 0 0 0 0 0 0 0 10 9 0 (103) ASP335 0 0 0 0 0 0 0 0 0 2 7 1 0 0 (136) HIS368 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (137) ASP369 0 0 0 0 0 0 0 0 0 9 3 0 0 0 (273) ILE505 0 0 0 0 2 5 5 0 0 0 0 0 0 0 (341) ASP573 0 0 2 9 8 0 0 0 0 0 0 0 0 0 (409) ASP641 0 8 8 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasHDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnIggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkkl >4osi_A:Thiolase-like; title=CRYSTAL STRUCTURE OF THE TAL EFFECTOR DHAX3 WITH NI RVD AT 2.8 ANGSTROM RESOLUTION organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DG(I2):DC(J14) DT(I3):DA(J13) DC(I4):DG(J12) DC(I5):DG(J11) DC(I6):DG(J10) DT(I7):DA(J9) DT(I8):DA(J8) DT(I9):DA(J7) DA(I10):DT(J6) DT(I11):DA(J5) DC(I12):DG(J4) DT(I13):DA(J3) DC(I14):DG(J2) DT(I15):DA(J1) DC(I16):DG(J0) DT(I17):DA(J-1) chainA ( 31) ARG266 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 ( 66) ASP301 0 5 10 1 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASP335 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 (134) ASP369 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 (270) ILE505 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 (338) ASP573 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 (406) ASP641 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 prot.sequence ralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnIggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkk >4osj_A:Thiolase-like; title=CRYSTAL STRUCTURE OF TAL EFFECTOR REVEALS THE RECOGNITION BETWEEN ASPARAGINE AND ADENINE organism=? DNA sequence DG(I2):DC(J14) DT(I3):DA(J13) DC(I4):DG(J12) DC(I5):DG(J11) DC(I6):DG(J10) DT(I7):DA(J9) DT(I8):DA(J8) DT(I9):DA(J7) DA(I10):DT(J6) DT(I11):DA(J5) DC(I12):DG(J4) DT(I13):DA(J3) DC(I14):DG(J2) DT(I15):DA(J1) DC(I16):DG(J0) DT(I17):DA(J-1) chainA ( 31) ARG266 0 0 0 2 14 3 0 0 0 0 0 0 0 0 0 0 ( 66) ASP301 0 8 7 2 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASP335 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 (133) HIS368 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (134) ASP369 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 (270) ASN505 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 (338) ASP573 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 (406) ASP641 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 prot.sequence ralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasHDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkkle >4osk_B:PLP-dependent_transferases;Thiolase-like; title=CRYSTAL STRUCTURE OF TAL EFFECTOR REVEALS THE RECOGNITION BETWEEN ASPARAGINE AND GUANINE organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DT(G1):DA(H15) DG(G2):DC(H14) DT(G3):DA(H13) DC(G4):DG(H12) DC(G5):DG(H11) DA(G6):DT(H10) DA(G7):DT(H9) DC(G8):DG(H8) DT(G9):DA(H7) DA(G10):DT(H6) DC(G11):DG(H5) DT(G12):DA(H4) DA(G13):DT(H3) DG(G14):DC(H2) DA(G15):DT(H1) DC(G16):DG(H0) chainB ( 2) GLN231 11 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG266 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 ( 72) ASP301 0 0 8 9 2 0 0 0 0 0 0 0 0 0 0 0 (106) ASP335 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 (140) SER369 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 (174) SER403 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 (208) ASP437 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 (274) SER505 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 (308) ASP539 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 (376) SER607 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 (410) ASN641 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 (444) SER675 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 prot.sequence mQwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasnSggkqaletvqallpvlcqahgltpeqvvaiasnSggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqgltpqqvvaiasnSggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiasnSggkqaletvqrllpvlcqahgltpeqvvaiasnNggkqaletvqrllpvlcqahgltpqqvvaiasnSggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkkle >4osl_B:Thiolase-like; title=CRYSTAL STRUCTURE OF TAL EFFECTOR REVEALS THE RECOGNITION BETWEEN HISTIDINE AND GUANINE organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DT(G-2):DA(H2) DG(G-1):DC(H1) DT(G0):DA(H0) DC(G1):DG(H-1) DC(G2):DG(H-2) DC(G3):DG(H-3) DT(G4):DA(H-4) DT(G5):DA(H-5) DT(G6):DA(H-6) DG(G7):DC(H-7) DT(G8):DA(H-8) DC(G9):DG(H-9) DT(G10):DA(H-10) DC(G11):DG(H-11) DT(G12):DA(H-12) DC(G13):DG(H-13) DT(G14):DA(H-14) chainB ( 36) ARG266 0 0 0 0 4 14 13 0 0 0 0 0 0 0 0 0 0 ( 71) ASP301 0 0 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP335 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 (139) ASP369 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 (206) ASN436 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (275) HIS505 0 0 0 0 0 0 0 0 15 17 8 0 0 0 0 0 0 (343) ASP573 0 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 (411) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 5 8 1 0 0 prot.sequence qwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasNgggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnHggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdaltndhlvalaclggrpaldavkkle >4osm_B:Thiolase-like; title=CRYSTAL STRUCTURE OF THE S505H MUTANT OF TAL EFFECTOR DHAX3 organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DT(G-2):DA(H2) DG(G-1):DC(H1) DT(G0):DA(H0) DC(G1):DG(H-1) DC(G2):DG(H-2) DC(G3):DG(H-3) DT(G4):DA(H-4) DT(G5):DA(H-5) DT(G6):DA(H-6) DA(G7):DT(H-7) DT(G8):DA(H-8) DC(G9):DG(H-9) DT(G10):DA(H-10) DC(G11):DG(H-11) DT(G12):DA(H-12) DC(G13):DG(H-13) DT(G14):DA(H-14) chainB ( 36) ARG266 0 0 0 0 4 14 14 0 0 0 0 0 0 0 0 0 0 ( 71) ASP301 0 0 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP335 0 0 0 1 10 2 0 0 0 0 0 0 0 0 0 0 0 (139) ASP369 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 (206) ASN436 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (275) HIS505 0 0 0 0 0 0 0 0 4 7 5 0 0 0 0 0 0 (343) ASP573 0 0 0 0 0 0 0 0 0 0 4 6 1 0 0 0 0 (411) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 4 8 1 0 0 prot.sequence qwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasNgggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnHggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpaaaltndhlvalaclggrpaldavkklehh >4osq_A:Thiolase-like; title=CRYSTAL STRUCTURE OF THE S505R MUTANT OF TAL EFFECTOR DHAX3 organism=? DNA sequence DT(I-2):DA(J2) DG(I-1):DC(J1) DT(I0):DA(J0) DC(I1):DG(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DT(I4):DA(J-4) DT(I5):DA(J-5) DT(I6):DA(J-6) DG(I7):DT(J-7) DT(I8):DA(J-8) DC(I9):DG(J-9) DT(I10):DA(J-10) DC(I11):DG(J-11) DT(I12):DA(J-12) DC(I13):DG(J-13) DT(I14):DA(J-14) chainA ( 36) ARG266 0 0 0 0 2 12 6 0 0 0 0 0 0 0 0 0 0 ( 71) ASP301 0 0 9 9 2 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP335 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 (139) ASP369 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 (206) ASN436 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (240) ASN470 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (275) ARG505 0 0 0 0 0 0 0 0 6 13 9 1 0 0 0 0 0 (343) ASP573 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 (411) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 prot.sequence qwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasNgggkqaletvqrllpvlcqahgltpqqvvaiasNgggkqaletvqrllpvlcqahgltpqqvvaiasnRggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkkl >4osr_A:Thiolase-like; title=CRYSTAL STRUCTURE OF THE S505K MUTANT OF TAL EFFECTOR DHAX3 organism=? DNA sequence DA(J-14):DT(I14) DG(J-13):DC(I13) DA(J-12):DT(I12) DG(J-11):DC(I11) DA(J-10):DT(I10) DG(J-9):DC(I9) DA(J-8):DT(I8) DT(J-7):DG(I7) DA(J-6):DT(I6) DA(J-5):DT(I5) DA(J-4):DT(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DG(J-1):DC(I1) DA(J0):DT(I0) DC(J1):DG(I-1) DA(J2):DT(I-2) chainA ( 36) ARG266 0 0 0 0 0 0 0 0 0 0 10 12 2 0 0 0 0 ( 71) ASP301 0 0 0 0 0 0 0 0 0 0 0 0 2 9 10 0 0 (105) ASP335 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 (139) ASP369 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 (275) LYS505 0 0 0 0 0 0 4 12 11 0 0 0 0 0 0 0 0 (343) ASP573 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 (411) ASP641 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnKggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkkleh >4oss_B:Thiolase-like; title=CRYSTAL STRUCTURE OF THE S505Q MUTANT OF TAL EFFECTOR DHAX3 organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DG(H-13):DC(G13) DA(H-12):DT(G12) DG(H-11):DC(G11) DA(H-10):DT(G10) DG(H-9):DC(G9) DA(H-8):DT(G8) DC(H-7):DG(G7) DA(H-6):DT(G6) DA(H-5):DT(G5) DA(H-4):DT(G4) DG(H-3):DC(G3) DG(H-2):DC(G2) DG(H-1):DC(G1) DA(H0):DT(G0) DC(H1):DG(G-1) DA(H2):DT(G-2) chainB ( 36) ARG266 0 0 0 0 0 0 0 0 0 12 12 3 0 0 0 0 ( 71) ASP301 0 0 0 0 0 0 0 0 0 0 0 2 9 7 0 0 (105) ASP335 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 (139) ASP369 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 (275) GLN505 0 0 0 0 0 3 14 12 0 0 0 0 0 0 0 0 (343) ASP573 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 (411) ASP641 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnQggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdaltndhlvalaclggrpaldavkkl >4ost_B:Thiolase-like; title=CRYSTAL STRUCTURE OF THE S505C MUTANT OF TAL EFFECTOR DHAX3 organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DT(G-2):DA(H2) DG(G-1):DC(H1) DT(G0):DA(H0) DC(G1):DG(H-1) DC(G2):DG(H-2) DC(G3):DG(H-3) DT(G4):DA(H-4) DT(G5):DA(H-5) DT(G6):DA(H-6) DA(G7):DT(H-7) DT(G8):DA(H-8) DC(G9):DG(H-9) DT(G10):DA(H-10) DC(G11):DG(H-11) DT(G12):DA(H-12) DC(G13):DG(H-13) chainB ( 36) ARG266 0 0 0 0 3 13 12 0 0 0 0 0 0 0 0 0 ( 71) ASP301 0 0 8 7 2 0 0 0 0 0 0 0 0 0 0 0 (105) ASP335 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 (139) ASP369 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 (275) CYS505 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 (343) ASP573 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 (411) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 prot.sequence qwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnCggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdaltndhlvalaclggrpaldavkkle >4osv_A:Thiolase-like; title=CRYSTAL STRUCTURE OF THE S505M MUTANT OF TAL EFFECTOR DHAX3 organism=? DNA sequence DT(I-2):DA(J2) DG(I-1):DC(J1) DT(I0):DA(J0) DC(I1):DG(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DT(I4):DA(J-4) DT(I5):DA(J-5) DT(I6):DA(J-6) DA(I7):DT(J-7) DT(I8):DA(J-8) DC(I9):DG(J-9) DT(I10):DA(J-10) DC(I11):DG(J-11) DT(I12):DA(J-12) DC(I13):DG(J-13) DT(I14):DA(J-14) chainA ( 36) ARG266 0 0 0 0 2 12 10 0 0 0 0 0 0 0 0 0 0 ( 71) ASP301 0 0 10 7 2 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP335 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 (139) ASP369 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 (275) MET505 0 0 0 0 0 0 0 0 3 10 5 0 0 0 0 0 0 (343) ASP573 0 0 0 0 0 0 0 0 0 0 3 9 2 0 0 0 0 (411) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 prot.sequence qwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnMggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkkl >4osw_A:Thiolase-like; title=CRYSTAL STRUCTURE OF THE S505E MUTANT OF TAL EFFECTOR DHAX3 organism=? DNA sequence DT(I-2):DA(J2) DG(I-1):DC(J1) DT(I0):DA(J0) DC(I1):DG(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DT(I4):DA(J-4) DT(I5):DA(J-5) DT(I6):DA(J-6) DA(I7):DT(J-7) DT(I8):DA(J-8) DC(I9):DG(J-9) DT(I10):DA(J-10) DC(I11):DG(J-11) DT(I12):DA(J-12) DC(I13):DG(J-13) DT(I14):DA(J-14) chainA ( 36) ARG266 0 0 0 0 2 11 7 0 0 0 0 0 0 0 0 0 0 ( 71) ASP301 0 0 10 10 2 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP335 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 0 (139) ASP369 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (275) GLU505 0 0 0 0 0 0 0 0 6 8 3 0 0 0 0 0 0 (343) ASP573 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 (411) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 prot.sequence qwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnEggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkkl >4osz_B:Thiolase-like; title=CRYSTAL STRUCTURE OF THE S505P MUTANT OF TAL EFFECTOR DHAX3 organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DT(G-2):DA(H2) DG(G-1):DC(H1) DT(G0):DA(H0) DC(G1):DG(H-1) DC(G2):DG(H-2) DC(G3):DG(H-3) DT(G4):DA(H-4) DT(G5):DA(H-5) DT(G6):DA(H-6) DA(G7):DT(H-7) DT(G8):DA(H-8) DC(G9):DG(H-9) DT(G10):DA(H-10) DC(G11):DG(H-11) DT(G12):DA(H-12) DC(G13):DG(H-13) DT(G14):DA(H-14) chainB ( 36) ARG266 0 0 0 0 3 17 12 0 0 0 0 0 0 0 0 0 0 ( 71) ASP301 0 0 6 7 2 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP335 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 (139) ASP369 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 (275) PRO505 0 0 0 0 0 0 0 0 3 7 2 0 0 0 0 0 0 (343) ASP573 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 (411) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 prot.sequence qwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnPggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdaltndhlvalaclggrpaldavkkle >4ot0_B:Thiolase-like; title=CRYSTAL STRUCTURE OF THE S505T MUTANT OF TAL EFFECTOR DHAX3 organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DG(H-13):DC(G13) DA(H-12):DT(G12) DG(H-11):DC(G11) DA(H-10):DT(G10) DG(H-9):DC(G9) DA(H-8):DT(G8) DT(H-7):DA(G7) DA(H-6):DT(G6) DA(H-5):DT(G5) DA(H-4):DT(G4) DG(H-3):DC(G3) DG(H-2):DC(G2) DG(H-1):DC(G1) DA(H0):DT(G0) DC(H1):DG(G-1) DA(H2):DT(G-2) chainB ( 36) ARG266 0 0 0 0 0 0 0 0 0 13 12 4 0 0 0 0 ( 71) ASP301 0 0 0 0 0 0 0 0 0 0 0 2 7 8 0 0 (105) ASP335 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 (139) ASP369 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 (275) THR505 0 0 0 0 0 2 7 5 0 0 0 0 0 0 0 0 (343) ASP573 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 (411) ASP641 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnTggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdaltndhlvalaclggrpaldavkkleh >4ot3_B:Thiolase-like; title=CRYSTAL STRUCTURE OF THE S505L MUTANT OF TAL EFFECTOR DHAX3 organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DT(G-2):DA(H2) DG(G-1):DC(H1) DT(G0):DA(H0) DC(G1):DG(H-1) DC(G2):DG(H-2) DC(G3):DG(H-3) DT(G4):DA(H-4) DT(G5):DA(H-5) DT(G6):DA(H-6) DA(G7):DT(H-7) DT(G8):DA(H-8) DC(G9):DG(H-9) DT(G10):DA(H-10) DC(G11):DG(H-11) DT(G12):DA(H-12) DC(G13):DG(H-13) chainB ( 36) ARG266 0 0 0 0 3 11 13 0 0 0 0 0 0 0 0 0 ( 71) ASP301 0 0 7 6 2 0 0 0 0 0 0 0 0 0 0 0 (105) ASP335 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 (139) ASP369 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 (275) LEU505 0 0 0 0 0 0 0 0 5 10 5 0 0 0 0 0 (343) ASP573 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 (411) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 prot.sequence qwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnLggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpaaltndhlvalaclggrpaldavkklehh >4oto_B:Thiolase-like; title=CRYSTAL STRUCTURE OF THE S505W MUTANT OF TAL EFFECTOR DHAX3 organism=XANTHOMONAS CAMPESTRIS PV. ARMORACIAE DNA sequence DT(G-2):DA(H2) DG(G-1):DC(H1) DT(G0):DA(H0) DC(G1):DG(H-1) DC(G2):DG(H-2) DC(G3):DG(H-3) DT(G4):DA(H-4) DT(G5):DA(H-5) DT(G6):DA(H-6) DA(G7):DT(H-7) DT(G8):DA(H-8) DC(G9):DG(H-9) DT(G10):DA(H-10) DC(G11):DG(H-11) DT(G12):DA(H-12) DC(G13):DG(H-13) DT(G14):DA(H-14) chainB ( 35) ARG266 0 0 0 0 4 14 11 0 0 0 0 0 0 0 0 0 0 ( 70) ASP301 0 0 8 7 2 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASP335 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 (138) ASP369 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 (274) TRP505 0 0 0 0 0 0 0 0 6 16 13 1 0 0 0 0 0 (342) ASP573 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 (410) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 prot.sequence wsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnWggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdaltndhlvalaclggrpaldavkkl >4ou6_ABCDE: title=CRYSTAL STRUCTURE OF DNAT84-153-DT10 SSDNA COMPLEX FORM 1 organism=Escherichia coli DNA sequence DT(L1) DT(L2) DT(L3) DT(L4) DT(L5) DT(L6) DT(L7) DT(L8) DT(L9) DT(L10) chainA ( 41) PHE124 0 0 0 0 3 0 0 0 0 0 ( 44) TYR127 0 0 0 0 25 0 0 0 0 0 ( 45) TRP128 0 0 0 0 13 0 0 0 0 0 ( 59) GLN142 0 0 1 0 0 0 0 0 0 0 ( 63) ARG146 0 0 0 5 0 0 0 0 0 0 ( 64) SER147 0 0 0 0 8 6 0 0 0 0 ( 67) ILE150 0 0 0 0 0 8 0 0 0 0 chainB ( 41) PHE124 0 0 0 0 0 0 3 0 0 0 ( 44) TYR127 0 0 0 0 0 0 26 0 0 0 ( 45) TRP128 0 0 0 0 0 0 12 0 0 0 ( 64) SER147 0 0 0 0 0 0 7 0 0 0 ( 67) ILE150 0 0 0 0 0 0 0 2 0 0 chainC ( 41) PHE124 0 0 3 0 0 0 0 0 0 0 ( 44) TYR127 0 0 27 0 0 0 0 0 0 0 ( 45) TRP128 0 0 12 0 0 0 0 0 0 0 ( 59) GLN142 3 0 0 0 0 0 0 0 0 0 ( 64) SER147 0 0 9 6 0 0 0 0 0 0 ( 67) ILE150 0 0 0 10 0 0 0 0 0 0 chainD ( 40) SER123 0 0 0 0 0 0 0 0 1 0 ( 44) TYR127 0 0 0 0 0 0 0 0 33 0 ( 45) TRP128 0 0 0 0 0 0 0 0 7 0 ( 63) ARG146 0 0 0 0 0 0 0 3 1 5 ( 64) SER147 0 0 0 0 0 0 0 0 6 6 ( 67) ILE150 0 0 0 0 0 0 0 0 0 6 chainE ( 40) SER123 2 0 0 0 0 0 0 0 0 0 ( 41) PHE124 2 0 0 0 0 0 0 0 0 0 ( 44) TYR127 25 0 0 0 0 0 0 0 0 0 ( 45) TRP128 6 0 0 0 0 0 0 0 0 0 ( 64) SER147 8 3 0 0 0 0 0 0 0 0 ( 67) ILE150 0 15 0 0 0 0 0 0 0 0 prot.sequence vpmgkfamypdwqpdadfirlaalwgvalrepvtteelasFiaYWqaegkvfhhvqwqQklaRSlqIgrasngglp/vpmgkfamypdwqpdadfirlaalwgvalrepvtteelaSFiaYWqaegkvfhhvqwqqklarSlqIgras/vpmgkfamypdwqpdadfirlaalwgvalrepvtteelasFiaYWqaegkvfhhvqwqQklarSlqIgra/vpmgkfamypdwqpdadfirlaalwgvalrepvtteelaSfiaYWqaegkvfhhvqwqQklaRSlqIgras/vpmgkfamypdwqpdadfirlaalwgvalrepvtteelaSFiaYWqaegkvfhhvqwqqklarSlqIgras >4ou6_C: title=CRYSTAL STRUCTURE OF DNAT84-153-DT10 SSDNA COMPLEX FORM 1 organism=Escherichia coli DNA sequence DT(L1) DT(L2) DT(L3) DT(L4) DT(L5) DT(L6) DT(L7) DT(L8) DT(L9) DT(L10) chainC ( 41) PHE124 0 0 3 0 0 0 0 0 0 0 ( 44) TYR127 0 0 27 0 0 0 0 0 0 0 ( 45) TRP128 0 0 12 0 0 0 0 0 0 0 ( 59) GLN142 3 0 0 0 0 0 0 0 0 0 ( 64) SER147 0 0 9 6 0 0 0 0 0 0 ( 67) ILE150 0 0 0 10 0 0 0 0 0 0 prot.sequence vpmgkfamypdwqpdadfirlaalwgvalrepvtteelasFiaYWqaegkvfhhvqwqQklarSlqIgra >4ou7_ABCDE: title=CRYSTAL STRUCTURE OF DNAT84-153-DT10 SSDNA COMPLEX REVEALS A NOVEL SINGLE-STRANDED DNA BINDING MODE organism=Escherichia coli DNA sequence DT(S1) DT(S2) DT(S3) DT(S4) DT(S5) DT(S6) DT(S7) DT(S8) DT(S9) DT(S10) chainA ( 44) TYR127 0 0 0 0 32 0 0 0 0 0 ( 45) TRP128 0 0 0 0 6 0 0 0 0 0 ( 59) GLN142 0 0 1 0 0 0 0 0 0 0 ( 63) ARG146 0 0 0 0 0 1 0 0 0 0 ( 64) SER147 0 0 0 0 2 3 0 0 0 0 ( 67) ILE150 0 0 0 0 0 8 0 0 0 0 chainB ( 40) SER123 0 0 0 0 0 0 1 0 0 0 ( 41) PHE124 0 0 0 0 0 0 1 0 0 0 ( 44) TYR127 0 0 0 0 0 0 21 0 0 0 ( 45) TRP128 0 0 0 0 0 0 5 0 0 0 ( 59) GLN142 0 0 0 0 1 0 0 0 0 0 ( 64) SER147 0 0 0 0 0 0 7 2 0 0 ( 67) ILE150 0 0 0 0 0 0 0 8 0 0 chainC ( 41) PHE124 0 0 2 0 0 0 0 0 0 0 ( 44) TYR127 0 0 23 0 0 0 0 0 0 0 ( 45) TRP128 0 0 7 0 0 0 0 0 0 0 ( 59) GLN142 1 0 0 0 0 0 0 0 0 0 ( 63) ARG146 0 1 0 0 0 0 0 0 0 0 ( 64) SER147 0 0 8 5 0 0 0 0 0 0 ( 67) ILE150 0 0 0 13 0 0 0 0 0 0 chainD ( 40) SER123 0 0 0 0 0 0 0 0 1 0 ( 44) TYR127 0 0 0 0 0 0 0 0 26 0 ( 45) TRP128 0 0 0 0 0 0 0 0 5 0 ( 59) GLN142 0 0 0 0 0 0 1 0 0 0 ( 63) ARG146 0 0 0 0 0 0 0 0 0 1 ( 64) SER147 0 0 0 0 0 0 0 0 2 0 ( 67) ILE150 0 0 0 0 0 0 0 0 0 8 chainE ( 41) PHE124 3 0 0 0 0 0 0 0 0 0 ( 44) TYR127 19 0 0 0 0 0 0 0 0 0 ( 45) TRP128 5 0 0 0 0 0 0 0 0 0 ( 63) ARG146 0 1 0 0 0 0 0 0 0 0 ( 64) SER147 8 1 0 0 0 0 0 0 0 0 ( 67) ILE150 0 12 0 0 0 0 0 0 0 0 prot.sequence vpmgkfamypdwqpdadfirlaalwgvalrepvtteelasfiaYWqaegkvfhhvqwqQklaRSlqIgras/vpmgkfamypdwqpdadfirlaalwgvalrepvtteelaSFiaYWqaegkvfhhvqwqQklarSlqIgras/vpmgkfamypdwqpdadfirlaalwgvalrepvtteelasFiaYWqaegkvfhhvqwqQklaRSlqIgra/vpmgkfamypdwqpdadfirlaalwgvalrepvtteelaSfiaYWqaegkvfhhvqwqQklaRSlqIgras/vpmgkfamypdwqpdadfirlaalwgvalrepvtteelasFiaYWqaegkvfhhvqwqqklaRSlqIgras >4ou7_C: title=CRYSTAL STRUCTURE OF DNAT84-153-DT10 SSDNA COMPLEX REVEALS A NOVEL SINGLE-STRANDED DNA BINDING MODE organism=Escherichia coli DNA sequence DT(S1) DT(S2) DT(S3) DT(S4) DT(S5) DT(S6) DT(S7) DT(S8) DT(S9) DT(S10) chainC ( 41) PHE124 0 0 2 0 0 0 0 0 0 0 ( 44) TYR127 0 0 23 0 0 0 0 0 0 0 ( 45) TRP128 0 0 7 0 0 0 0 0 0 0 ( 59) GLN142 1 0 0 0 0 0 0 0 0 0 ( 63) ARG146 0 1 0 0 0 0 0 0 0 0 ( 64) SER147 0 0 8 5 0 0 0 0 0 0 ( 67) ILE150 0 0 0 13 0 0 0 0 0 0 prot.sequence vpmgkfamypdwqpdadfirlaalwgvalrepvtteelasFiaYWqaegkvfhhvqwqQklaRSlqIgra >4ov7_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCESTRAL STEROID RECEPTOR 2 DBD HELIX MUTANT - SRE DNA COMPLEX organism=synthetic construct DNA sequence DC(I2):DG(J18) DA(I3):DT(J17) DG(I4):DC(J16) DA(I5):DT(J15) DA(I6):DT(J14) DC(I7):DG(J13) DA(I8):DT(J12) DG(I9):DC(J11) DA(I10):DT(J10) DG(I11):DC(J9) DT(I12):DA(J8) DG(I13):DC(J7) DT(I14):DA(J6) DT(I15):DA(J5) DC(I16):DG(J4) DT(I17):DA(J3) DG(I18):DC(J2) chainA ( 26) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 ( 27) VAL29 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 31) ARG33 0 0 0 0 0 0 0 0 0 0 14 12 2 0 0 0 0 prot.sequence pqkvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlg >4ov7_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCESTRAL STEROID RECEPTOR 2 DBD HELIX MUTANT - SRE DNA COMPLEX organism=synthetic construct DNA sequence DC(J2):DG(I18) DA(J3):DT(I17) DG(J4):DC(I16) DA(J5):DT(I15) DA(J6):DT(I14) DC(J7):DG(I13) DA(J8):DT(I12) DC(J9):DG(I11) DT(J10):DA(I10) DC(J11):DG(I9) DT(J12):DA(I8) DG(J13):DC(I7) DT(J14):DA(I6) DT(J15):DA(I5) DC(J16):DG(I4) DT(J17):DA(I3) DG(J18):DC(I2) chainA ( 26) LYS28 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) VAL29 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG33 0 0 0 0 2 12 14 0 0 0 0 0 0 0 0 0 0 chainB ( 24) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 ( 25) VAL29 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 17 13 3 0 0 0 0 prot.sequence pqkvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlg/kvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtl >4ov7_EF:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCESTRAL STEROID RECEPTOR 2 DBD HELIX MUTANT - SRE DNA COMPLEX organism=synthetic construct DNA sequence DC(K2):DG(L18) DA(K3):DT(L17) DG(K4):DC(L16) DA(K5):DT(L15) DA(K6):DT(L14) DC(K7):DG(L13) DA(K8):DT(L12) DG(K9):DC(L11) DA(K10):DT(L10) DG(K11):DC(L9) DT(K12):DA(L8) DG(K13):DC(L7) DT(K14):DA(L6) DT(K15):DA(L5) DC(K16):DG(L4) DT(K17):DA(L3) DG(K18):DC(L2) chainE ( 26) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 ( 27) VAL29 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 31) ARG33 0 0 0 0 0 0 0 0 0 0 18 13 1 0 0 0 0 chainF ( 25) LYS28 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL29 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG33 0 0 0 0 4 14 15 0 0 0 0 0 0 0 0 0 0 prot.sequence pqkvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtl/qkvclicgdeasgchygvltcgscKVffkRaveghnylcagrndciidkirrkncpacrlrkclqagmtl >4p0p_A:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF HUMAN MUS81-EME1 IN COMPLEX WITH 5'-FLAP DNA, AND MG2+ organism=HOMO SAPIENS DNA sequence DA(E2):DT(G38) DA(E3):DT(G37) DT(E4):DA(G36) DG(E5):DC(G35) DT(E6):DA(G34) DG(E7):DC(G33) DT(E8):DA(G32) DG(E9):DC(G31) DT(E10):DA(G30) DC(E11):DG(G29) DT(E12):DA(G28) chainA ( 85) ILE344 6 0 0 0 0 0 0 0 0 0 0 ( 86) ILE345 6 0 0 0 0 0 0 0 0 0 0 (120) LEU379 8 0 0 0 0 0 0 0 0 0 0 (124) THR383 2 0 0 0 0 0 0 0 0 0 0 (262) ARG530 0 0 0 0 0 0 0 0 1 0 0 prot.sequence qqqplelrpgeyrvllcvdigetrgpellrelqrlhvthtvrklhvgdfvwvaqetnprdpanpgelvldhiverkrlddlcssIIdgrfreqkfrlkrcglerrvylveehgsvhnlsLpesTllqavtntqvidgffvkrtadikesaaylalltrglqrlyqghtlrsrpwgtpgpnplcslltfsdfnagaiknkaqsvrevfarqlmqvrgvsgekaaalvdrystpasllaaydacatpkeqetllstikcgrlqRnlgpalsrtlsqlycsygplt >4p0p_AB:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF HUMAN MUS81-EME1 IN COMPLEX WITH 5'-FLAP DNA, AND MG2+ organism=HOMO SAPIENS DNA sequence DA(E2):DT(G38) DA(E3):DT(G37) DT(E4):DA(G36) DG(E5):DC(G35) DT(E6):DA(G34) DG(E7):DC(G33) DT(E8):DA(G32) DG(E9):DC(G31) DT(E10):DA(G30) DC(E11):DG(G29) DT(E12):DA(G28) chainA ( 85) ILE344 6 0 0 0 0 0 0 0 0 0 0 ( 86) ILE345 6 0 0 0 0 0 0 0 0 0 0 (120) LEU379 8 0 0 0 0 0 0 0 0 0 0 (124) THR383 2 0 0 0 0 0 0 0 0 0 0 (262) ARG530 0 0 0 0 0 0 0 0 1 0 0 chainB prot.sequence qqqplelrpgeyrvllcvdigetrgpellrelqrlhvthtvrklhvgdfvwvaqetnprdpanpgelvldhiverkrlddlcssIIdgrfreqkfrlkrcglerrvylveehgsvhnlsLpesTllqavtntqvidgffvkrtadikesaaylalltrglqrlyqghtlrsrpwgtpgpnplcslltfsdfnagaiknkaqsvrevfarqlmqvrgvsgekaaalvdrystpasllaaydacatpkeqetllstikcgrlqRnlgpalsrtlsqlycsygplt/rmkaqrpeeclkhiivvldpvllqmegggqllgalqtmecrcvieaqavpcsvtwrrragpsedredwveeptvlvllraeafvSMidngktlqgfvtditaktagkalslvivdqekcFvsrVdaeealvdlqlhteaqaqivqswkeladftcaftkavaeapfkklrdettfsfclesdwaggvkvdlagrglalvwrrqiqqlnrvslemasavvnaypspqllvqayqqcfsdkerqnlladiqvrrtsrrigpelSrriylqmttlqphlsl >4p0q_AB:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF HUMAN MUS81-EME1 IN COMPLEX WITH 5'-FLAP DNA organism=HOMO SAPIENS DNA sequence DA(G28):DT(E12) DG(G29):DC(E11) DA(G30):DT(E10) DC(G31):DG(E9) DA(G32):DT(E8) DC(G33):DG(E7) DA(G34):DT(E6) DC(G35):DG(E5) DA(G36):DT(E4) DT(G37):DA(E3) DT(G38):DA(E2) chainA ( 87) ILE344 0 0 0 0 0 0 0 0 0 0 5 ( 88) ILE345 0 0 0 0 0 0 0 0 0 0 5 (122) LEU379 0 0 0 0 0 0 0 0 0 0 5 (126) THR383 0 0 0 0 0 0 0 0 0 0 1 (264) ARG530 0 0 1 0 0 0 0 0 0 0 0 chainB prot.sequence qqqplelrpgeyrvllcvdigetrghrpellrelqrlhvthtvrklhvgdfvwvaqetnprdpanpgelvldhiverkrlddlcssIIdgrfreqkfrlkrcglerrvylveehgsvhnlsLpesTllqavtntqvidgffvkrtadikesaaylalltrglqrlyqghtlrsrpwgtpgpnplcslltfsdfnagaiknkaqsvrevfarqlmqvrgvsgekaaalvdrystpasllaaydacatpkeqetllstikcgrlqRnlgpalsrtlsqlycsygplt/naalvtrmkaqrpeeclkhiivvldpvllqmegggqllgalqtmecrcvieaqavpcsvtwrrragpsedredwveeptvlvllraEAfvsmidngktlqgfvtditaktagkalslvivdQekcFvsrvdaeealvdlqlhteaqaqivqswkeladftcaftkavaeapfkklrdettfsfclesdwaggvkvdlagrglalvwrrqiqqlnrvslemasavvnaypspqllvqayqqcfsdkerqnlladiqvrrtsrriGpelsrriylqmttlqphlsl >4p2h_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE COMPLEXED WITH N7MG IN THE TEMPLATE OPPOSITE TO INCOMING NON-HYDROLYZABLE TTP WITH MANGANESE IN THE ACTIVE SITE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 9 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4p4m_A:Nucleotidyltransferase;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF LEISHMANIA INFANTUM POLYMERASE BETA: TERNARY P/T COMPLEX organism=Leishmania infantum DNA sequence DT(E7):DA(D5) DA(E8):DT(D4) DC(E9):DG(D3) DT(E10):DA(D2) DG(E11):DC(D1) chainA (152) LYS241 0 1 4 0 0 (201) ARG298 4 0 0 0 0 prot.sequence kpklkaiqeltqvhgfgpraaaalfdregiftvdellqkadsipsltdQqrvgikyfydinekipmqesvlhenylrekcmevlgkdfsilicgsyrrrhpfsgdvdailsrtldapplsepvaatgvlghfvefleslkyleatmaqgplKyMgmgrlpprintkvykarrvdirlietksvptamltftgsknfnvimRqaaiskgyllnEyglfklgtpeeargknageelgvpkdeledkrvevrseqdvfdvlgmpyakpenrdp >4p4o_A:Nucleotidyltransferase;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF LEISHMANIA INFANTUM POLYMERASE BETA: TERNARY GAP COMPLEX organism=Leishmania infantum DNA sequence DC(E1):DG(F11) DA(E2):DT(F10) DG(E3):DC(F9) DT(E4):DA(F8) DA(E5):DT(F7) DT(E6):DA(F6) chainA (179) LYS241 0 0 0 0 2 1 (228) ARG298 0 0 0 0 0 3 prot.sequence qemadlnnalgekykvssyhkllkkatkpklkaiqeltqvhgfgpraaaalfdregiftvdellqkadsipsltdQqrvgikyfydinekipmqesvlhenylrekcmevlgkdfsilicgsyrrrhpfsgdvdailsrtldapplsepvaatgvlghfvefleslkyleatmaqgplKymgmgrlpprintkvykarrvdiRlietksvptamltftgsknfnvimRqaaiskgyllnEyglfklgtpeearalyerigirgknageelgvpkdeledkrvevrseqdvfdvlgmpyakpenrdp >4p4p_A:Nucleotidyltransferase;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF LEISHMANIA INFANTUM POLYMERASE BETA: NICK COMPLEX organism=Leishmania infantum DNA sequence DC(C1):DG(B11) DA(C2):DT(B10) DG(C3):DC(B9) DT(C4):DA(B8) DA(C5):DT(B7) DC(C6):DG(B6) DT(C7):DA(B5) chainA ( 1) LYS32 0 0 0 0 0 0 2 (155) LYS241 0 0 0 1 0 0 0 (192) THR286 0 0 0 0 0 0 1 (197) LYS291 0 0 0 0 0 0 20 (200) ASN294 0 0 0 0 0 0 5 (201) VAL295 0 0 0 0 0 0 7 (204) ARG298 0 0 0 0 0 3 10 prot.sequence KykvpklkaiqeltqvhgfgpraaaalfdregiftvdellqkadsipsltdQqrvgikyfydinekipmqesvlhenylrekcmevlgkdfsilicgsyrrrhpfsgdvdailsrtldapplsepvaatgvlghfvefleslkyleatmaqgplKymgmgrlpprintkvykarrvdiRlietksvptamlTftgsKnfNVimRqaaiskgyllnEyglfklgtpeearalyerigirgknageelgvpkdeledkrvevrseqdvfdvlgmpyakpenrdp >4p9u_F:GntR_ligand-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM VIBRIO CHOLERAE, IN COMPLEX WITH DNA organism=Vibrio cholerae DNA sequence DC(G1):DG(H31) DT(G2):DA(H30) DT(G3):DA(H29) DA(G4):DT(H28) DG(G5):DC(H27) DG(G6):DC(H26) DC(G7):DG(H25) DA(G8):DT(H24) DA(G9):DT(H23) DC(G10):DG(H22) DT(G11):DA(H21) DG(G12):DC(H20) DG(G13):DC(H19) DT(G14):DA(H18) DC(G15):DG(H17) DA(G16):DT(H16) DA(G17):DT(H15) DA(G18):DT(H14) DC(G19):DG(H13) DC(G20):DG(H12) DA(G21):DT(H11) DG(G22):DC(H10) DA(G23):DT(H9) DA(G24):DT(H8) DC(G25):DG(H7) DA(G26):DT(H6) DT(G27):DA(H5) DA(G28):DT(H4) DA(G29):DT(H3) DA(G30):DT(H2) DA(G31):DT(H1) chainF ( 29) GLU34 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG35 0 0 0 0 0 0 0 0 0 0 5 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG45 0 0 0 0 0 0 0 0 0 0 0 5 10 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLU50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) HIS65 0 0 0 0 0 0 0 0 0 1 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kspagfaekyiiesiwngrfppgsilpaERelseligvTRTTlREvlqrlardgwltiqHgkptkvnqfmetsglhildtlmtldaenatsivedllaartnispifmryafklnkesaeriminviescealvnapswdafiaaspyaekiqqhvkedsekdelkrqeiliaktfnfydymlfqrlafhsgnqiyglifnglkklydrvgsyyfsnpqarelamefyrqllavcqsgerehlpqvirqygiasghiwnqmkmtlpsnfted >4par_AD: title=THE 5-HYDROXYMETHYLCYTOSINE-SPECIFIC RESTRICTION ENZYME ABASI IN A COMPLEX WITH PRODUCT-LIKE DNA organism=Acinetobacter baumannii DNA sequence DT(H29):DA(F14) DA(H30):DT(F13) DT(H31):DA(F12) DT(H32):DA(F11) DG(H33):DC(F10) DT(H34):DA(F9) DA(H35):DT(F8) DT(H36):DA(F7) DC(H37):DG(F6) DG(H38):DT(F4) DA(H39):DC(F3) DG(H40):DG(F2) DC(H41):DT(F1) chainA (205) GLN209 0 0 0 0 0 0 0 0 4 12 10 0 0 chainD prot.sequence assdltdyvirqlgrtknkryeayvvsriihllndftlkfvtqqfvrlsnkkialtdlyfpqlgihievdeghhflrnskmeyslnqideplysisqtesdamreediisitghkifrvnvfknqegqpqnlenihqqidkiieeiktaknklieastfkewnieteynpqtyidlgrisladnvvlkttkdvcncfgysyknyQrggalhpykkdtliwfprlyenkdwintispdgltitekstdetitlkkleewkngpqkrivfarvkdnlssramyrfmglyefqkadlkdgavwkrvksevqtyspke/assdltdyvirqlgrtknkryeayvvsriihllndftlkfvtqqfvrlsnkkialtdlyfpqlgihievdeghhflrnskmeyslnqideplysisqtesdamreediisitghkifrvnvfknqegqpqnlenihqqidkiieeiktaknklieastfkewnieteynpqtyidlgrisladnvvlkttkdvcncfgysyknyQrggalhpykkdtliwfprlyenkdwintispdgltitekstdetitlkkleewkngpqkrivfarvkdnlssramyrfmglyefqkadlkdgavwkrvksevqtyspk >4pba_ABCD: title=THE 5-HYDROXYMETHYLCYTOSINE-SPECIFIC RESTRICTION ENZYME ABASI IN A COMPLEX WITH SUBSTRATE-LIKE DNA organism=Acinetobacter baumannii DNA sequence DC(F1):DA(E31) DT(F2):DT(E30) DA(F3):DT(E29) DA(F4):DG(E28) DG(F6):DC(E27) DT(F7):DA(E26) DG(F8):DC(E25) DG(F9):DC(E24) DA(F10):DT(E23) DT(F11):DA(E22) DG(F12):DC(E21) DA(F13):DT(E20) DT(F14):DA(E19) DA(F15):DT(E18) DA(F16):DT(E17) DT(F17):DA(E16) DT(F18):DA(E15) DA(F19):DT(E14) DT(F20):DA(E13) DC(F21):DG(E12) DA(F22):DT(E11) DT(F23):DA(E10) DC(F24):DG(E9) DC(F25):DG(E8) DA(F26):DT(E7) DC(F27):DG(E6) DG(F28):DA(E4) DT(F29):DA(E3) DT(F30):DT(E2) chainB chainA (205) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 4 chainC (206) GLN209 0 0 0 0 0 0 0 0 0 0 0 4 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence assdltdyvirqlgrtknkryeayvvsriihllndftlkfvtqqfvrlsnkkialtdlyfpqlgihievdeghhflrnskmeyslnqideplysisqtesdamreediisitghkifrvnvfknqegqpqnlenihqqidkiieeiktaknklieastfkewnieteynpqtyidlgrisladnvvlkttkdvcncfgysyknyQrggalhpykkdtliwfprlyenkdwintispdgltitekstdetitlkkleewkngpqkrivfarvkdnlssramyrfmglyefqkadlkdgavwkrvksevqtyspke/assdltdyvirqlgrtknkryeayvvsriihllndftlkfvtqqfvrlsnkkialtdlyfpqlgihievdeghhflrnskmeyslnqideplysisqtesdamreediisitghkifrvnvfknqegqpqnlenihqqidkiieeiktaknklieastfkewnieteynpqtyidlgrisladnvvlkttkdvcncfgysyknyQrggalhpykkdtliwfprlyenkdwintispdgltitekstdetitlkkleewkngpqkrivfarvkdnlssramyrfmglyefqkadlkdgavwkrvksevqtyspk/kassdltdyvirqlgrtknkryeayvvsriihllndftlkfvtqqfvrlsnkkialtdlyfpqlgihievdeghhflrnskmeyslnqideplysisqtesdamreediisitghkifrvnvfknqegqpqnlenihqqidkiieeiktaknklieastfkewnieteynpqtyidlgrisladnvvlkttkdvcncfgysyknyQrggalhpykkdtliwfprlyenkdwintispdgltitekstdetitlkkleewkngpqkrivfarvkdnlssramyrfmglyefqkadlkdgavwkrvksevqtyspk/assdltdyvirqlgrtknkryeayvvsriihllndftlkfvtqqfvrlsnkkialtdlyfpqlgihievdeghhflrnskmeyslnqideplysisqtesdamreediisitghkifrvnvfknqegqpqnlenihqqidkiieeiktaknklieastfkewnieteynpqtyidlgrisladnvvlkttkdvcncfgysyknyqRggalhpykkdtliwfprlyenkdwintispdgltitekstdetitlkkleewkngpqkrivfarvkdnlssramyrfmglyefqkadlkdgavwkrvksevqtyspk >4pba_C: title=THE 5-HYDROXYMETHYLCYTOSINE-SPECIFIC RESTRICTION ENZYME ABASI IN A COMPLEX WITH SUBSTRATE-LIKE DNA organism=Acinetobacter baumannii DNA sequence DC(F1):DA(E31) DT(F2):DT(E30) DA(F3):DT(E29) DA(F4):DG(E28) DG(F6):DC(E27) DT(F7):DA(E26) DG(F8):DC(E25) DG(F9):DC(E24) DA(F10):DT(E23) DT(F11):DA(E22) DG(F12):DC(E21) DA(F13):DT(E20) DT(F14):DA(E19) DA(F15):DT(E18) DA(F16):DT(E17) DT(F17):DA(E16) DT(F18):DA(E15) DA(F19):DT(E14) DT(F20):DA(E13) DC(F21):DG(E12) DA(F22):DT(E11) DT(F23):DA(E10) DC(F24):DG(E9) DC(F25):DG(E8) DA(F26):DT(E7) DC(F27):DG(E6) DG(F28):DA(E4) DT(F29):DA(E3) DT(F30):DT(E2) chainC (206) GLN209 0 0 0 0 0 0 0 0 0 0 0 4 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kassdltdyvirqlgrtknkryeayvvsriihllndftlkfvtqqfvrlsnkkialtdlyfpqlgihievdeghhflrnskmeyslnqideplysisqtesdamreediisitghkifrvnvfknqegqpqnlenihqqidkiieeiktaknklieastfkewnieteynpqtyidlgrisladnvvlkttkdvcncfgysyknyQrggalhpykkdtliwfprlyenkdwintispdgltitekstdetitlkkleewkngpqkrivfarvkdnlssramyrfmglyefqkadlkdgavwkrvksevqtyspk >4pcz_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A COMPLEX BETWEEN R247G LLFPG MUTANT AND A THF CONTAINING DNA organism=Lactococcus lactis subsp. cremoris DNA sequence DT(B2):DA(C28) DC(B3):DG(C27) DT(B4):DA(C26) DT(B5):DA(C25) DT(B6):DA(C24) 3DR(B7):DC(C23) DT(B8):DA(C22) DT(B9):DA(C21) DT(B10):DA(C20) DC(B11):DG(C19) DT(B12):DA(C18) DC(B13):DG(C17) DG(B14):DC(C16) chainA ( 74) ARG74 0 0 0 0 0 0 7 4 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 13 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 2 0 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 76 15 1 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 11 37 0 0 0 0 0 0 (260) ARG260 0 0 0 0 0 0 5 1 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssirtysalgstgkmqnelqvygktgekcsgcgaeiqkikvagRgthfcpvcqqk >4pd2_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A COMPLEX BETWEEN A C248GH LLFPG MUTANT AND A THF CONTAINING DNA organism=Lactococcus lactis subsp. cremoris DNA sequence DC(C16):DG(B14) DG(C17):DC(B13) DA(C18):DT(B12) DG(C19):DC(B11) DA(C20):DT(B10) DA(C21):DT(B9) DA(C22):DT(B8) DC(C23):3DR(B7) DA(C24):DT(B6) DA(C25):DT(B5) DA(C26):DT(B4) DG(C27):DC(B3) DA(C28):DT(B2) chainA ( 74) ARG74 0 0 0 0 0 3 16 0 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 26 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 0 0 0 0 1 0 0 0 0 (109) ARG109 0 0 0 0 0 0 2 15 36 0 0 0 0 (111) PHE111 0 0 0 0 0 0 78 11 0 0 0 0 0 (261) ARG261 0 0 0 0 0 1 10 0 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssirtysalgstgkmqnelqvygktgekcsrghgaeiqkikvagRgthfcpvcqqk >4pdg_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A COMPLEX BETWEEN AN INHIBITED LLFPG AND A THF CONTAINING DNA organism=Lactococcus lactis subsp. cremoris DNA sequence DC(B1):DA(C28) DT(B2):DG(C27) DC(B3):DA(C26) DT(B4):DA(C25) DT(B5):DA(C24) DT(B6):DC(C23) DT(B8):DA(C22) DT(B9):DA(C21) DT(B10):DA(C20) DC(B11):DG(C19) DT(B12):DA(C18) DC(B13):DG(C17) DG(B14):DC(C16) chainA ( 74) ARG74 0 0 0 0 0 0 9 4 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 12 0 0 0 0 0 0 (109) ARG109 0 0 0 0 25 30 1 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 10 42 0 0 0 0 0 0 (255) ARG260 0 0 0 0 0 0 5 1 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMegkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >4pdi_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A COMPLEX BETWEEN AN INHIBITED LLFPG AND A N7- BENZYL-FAPY-DG CONTAINING DNA organism=Lactococcus lactis subsp. cremoris DNA sequence DC(B1):DA(C28) DT(B2):DG(C27) DC(B3):DA(C26) DT(B4):DA(C25) DT(B5):DA(C24) DT(B6):DC(C23) DT(B8):DA(C22) DT(B9):DA(C21) DT(B10):DA(C20) DC(B11):DG(C19) DT(B12):DA(C18) DC(B13):DG(C17) DG(B14):DC(C16) chainA ( 74) ARG74 0 0 0 0 0 0 7 3 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 10 0 0 0 0 0 0 (109) ARG109 0 0 0 0 21 32 1 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 12 36 0 0 0 0 0 0 (257) ARG260 0 0 0 0 0 0 4 1 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMegkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssiralgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >4pgq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH G IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE TTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 26) HIS34 40 0 0 0 0 ( 27) LYS35 9 0 0 0 0 ( 30) ALA38 4 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskdekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4pgx_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH G IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE TTP AND MANGANESE organism=Homo sapiens DNA sequence DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 0 3 0 0 0 0 0 0 0 (262) TYR271 8 0 0 0 0 0 0 0 0 0 (274) ARG283 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4pgy_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH A NICKED DNA CONTAINING A GT AT N-1 POSITION AND GC AT N POSITION organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 36 0 0 0 0 ( 29) LYS35 9 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4ph5_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH A NICKED DNA CONTAINING A AC AT N-1 POSITION AND GC AT N POSITION organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DA(T7) DC(P11):DG(T6) chainA (225) LYS234 0 0 0 0 0 0 0 6 1 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 4 5 (263) PHE272 0 0 0 0 0 0 0 0 0 1 0 (267) ASP276 0 0 0 0 0 0 0 0 0 0 7 (270) ASN279 0 0 0 0 0 0 0 0 0 0 8 (271) LYS280 0 0 0 0 0 0 0 0 0 0 17 (274) ARG283 0 0 0 0 0 0 0 0 0 2 13 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYFtgsDifNKnmRahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4pha_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH A IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE CTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 31 0 0 0 0 ( 29) LYS35 8 0 0 0 0 ( 32) ALA38 4 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4phd_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH A IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE CTP AND MANGANESE organism=Homo sapiens DNA sequence DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (226) LYS234 0 1 7 0 0 0 0 0 0 0 (262) TYR271 6 0 0 0 0 0 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskdekeyphrridirlipkdqyycgvlYftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4phe_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH T IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE GTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 35 0 0 0 0 ( 29) LYS35 9 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpsdekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4php_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH T IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE GTP AND MANGANESE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 6 0 0 0 0 ( 29) ALA38 3 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4plb_BD:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF S.A. GYRASE-AM8191 COMPLEX organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(E2):DC(F19) DC(E3):DG(F18) DC(E4):DG(F17) DG(E5):DC(F16) DT(E6):DA(F15) DA(E7):DT(F14) DG(E8):DC(F13) DG(E9):DC(F12) DG(E10):DC(F11) DC(E11):DG(F10) DC(E12):DG(F9) DC(E13):DG(F8) DT(E14):DA(F7) DA(E15):DT(F6) DC(E16):DG(F5) DG(E17):DC(F4) DG(E18):DC(F3) DC(E19):DG(F2) DT(E20):DA(F1) chainB ( 42) ARG458 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 (266) SER1085 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (273) ARG1092 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) ARG1122 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (356) ILE1175 0 0 20 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 42) ARG458 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 (213) ARG1033 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (265) SER1085 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (302) ARG1122 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (355) ILE1175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 20 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyanernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvRmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldyamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >4plb_D:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF S.A. GYRASE-AM8191 COMPLEX organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(F1):DT(E20) DG(F2):DC(E19) DC(F3):DG(E18) DC(F4):DG(E17) DG(F5):DC(E16) DT(F6):DA(E15) DA(F7):DT(E14) DG(F8):DC(E13) DG(F9):DC(E12) DG(F10):DC(E11) DC(F11):DG(E10) DC(F12):DG(E9) DC(F13):DG(E8) DT(F14):DA(E7) DA(F15):DT(E6) DC(F16):DG(E5) DG(F17):DC(E4) DG(F18):DC(E3) DC(F19):DG(E2) chainD ( 42) ARG458 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 (213) ARG1033 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) SER1085 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (302) ARG1122 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (355) ILE1175 0 0 0 20 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldyamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >4pog_AEF:Nucleic_acid-binding_proteins; title=MCM-SSDNA CO-CRYSTAL STRUCTURE organism=Pyrococcus furiosus DNA sequence DT(X1) DT(X2) DT(X3) DT(X4) DT(X5) DT(X6) DT(X7) chainA (128) GLU127 24 0 0 0 0 0 0 (130) LYS129 2 0 0 0 0 0 0 chainE (125) ARG124 0 0 0 0 0 3 4 (187) ARG186 0 0 0 0 0 9 0 (200) MET199 0 0 0 1 0 0 0 (202) ARG201 0 0 0 0 2 0 0 (203) PHE202 0 0 0 0 29 0 0 (242) ARG241 0 0 0 0 1 0 0 chainF (125) ARG124 0 3 5 0 0 0 0 (128) GLU127 0 0 0 0 28 0 0 (130) LYS129 0 0 0 0 2 0 0 (187) ARG186 0 8 0 0 0 0 0 (202) ARG201 6 0 0 0 0 0 0 (203) PHE202 34 3 0 0 0 0 0 prot.sequence svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtrvgEiKpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfriqdrpetlkggemprfidgillddivdvalpgdrvivtgilrvvlekrektpifrkilevnhiepvsk/svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtRvgeikpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfRiqdrpetlkggeMpRFidgillddivdvalpgdrvivtgilrvvlekrektpifRkilevnhiepvsk/svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtRvgEiKpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfRiqdrpetlkggempRFidgillddivdvalpgdrvivtgilrvvlekrektpifrkilevnhiepvsk >4pog_BCD:Nucleic_acid-binding_proteins; title=MCM-SSDNA CO-CRYSTAL STRUCTURE organism=Pyrococcus furiosus DNA sequence DT(Z6) DT(Z1) DT(Z2) DT(Z3) DT(Z4):DT(Z6) DT(Z5) chainB (125) ARG124 3 0 0 0 3 0 (187) ARG186 4 0 0 0 4 0 (200) MET199 0 0 0 0 4 0 (202) ARG201 0 0 0 0 0 2 (203) PHE202 0 0 0 0 0 32 chainC (125) ARG124 0 0 4 1 0 0 (128) GLU127 0 0 0 0 0 23 (130) LYS129 0 0 0 0 0 1 (187) ARG186 0 0 9 0 0 0 (202) ARG201 0 2 0 0 0 0 (203) PHE202 0 37 2 0 0 0 (234) LYS233 0 0 0 1 0 0 (242) ARG241 0 2 0 0 0 0 chainD (128) GLU127 0 28 0 0 0 0 (130) LYS129 0 2 0 0 0 0 prot.sequence svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtRvgeikpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfRiqdrpetlkggeMpRFidgillddivdvalpgdrvivtgilrvvlekrektpifrkilevnhiepvsk/svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtRvgEiKpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfRiqdrpetlkggempRFidgillddivdvalpgdrvivtgilrvvleKrektpifRkilevnhiepvsk/svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtrvgEiKpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfriqdrpetlkggemprfidgillddivdvalpgdrvivtgilrvvlekrektpifrkilevnhiepvsk >4pog_GHI:Nucleic_acid-binding_proteins; title=MCM-SSDNA CO-CRYSTAL STRUCTURE organism=Pyrococcus furiosus DNA sequence DT(Y10) DT(Y9) DT(Y8) DT(Y7) DT(Y6) DT(Y1) DT(Y2) DT(Y3) DT(Y4):DT(Y6) DT(Y5) chainG (181) ARG186 3 0 0 0 0 0 0 0 0 0 (194) MET199 0 0 4 0 0 0 0 0 0 0 (196) ARG201 0 3 0 0 0 0 0 0 0 0 (197) PHE202 0 32 0 0 0 0 0 0 0 0 chainH (125) ARG124 0 0 0 4 3 0 0 0 3 0 (128) GLU127 0 35 0 0 0 0 0 0 0 0 (130) LYS129 0 2 0 0 0 0 0 0 0 0 (187) ARG186 0 0 0 0 8 0 0 0 8 0 (200) MET199 0 0 0 0 0 0 0 0 5 0 (202) ARG201 0 0 0 0 0 0 0 0 0 3 (203) PHE202 0 0 0 0 3 0 0 0 3 33 (242) ARG241 0 0 0 0 0 0 0 0 0 1 chainI (125) ARG124 0 0 0 0 0 0 3 2 1 0 (128) GLU127 0 0 0 0 0 0 0 0 0 26 (130) LYS129 0 0 0 0 0 0 0 0 0 2 (187) ARG186 0 0 0 0 0 0 7 0 0 0 (200) MET199 0 0 0 0 0 1 0 0 0 0 (202) ARG201 0 0 0 0 0 3 0 0 0 0 (203) PHE202 0 0 0 0 0 29 3 0 0 0 (234) LYS233 0 0 0 0 0 0 1 1 0 0 prot.sequence svdreemierfanflretdedgnpvyrgkitdlltitpkridwmhlnsfdselahevienpeegisaaedaiqivlredredvgkiharfynlpetlmvkdigaehinkliqvegivtrvgeikpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfRiqdrpetlkggeMpRFidgillddivdvalpgdrvivtgilrvvlekrektpifrkilevnhiepvsk/svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtRvgEiKpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfRiqdrpetlkggeMpRFidgillddivdvalpgdrvivtgilrvvlekrektpifRkilevnhiepvsk/svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtRvgEiKpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfRiqdrpetlkggeMpRFidgillddivdvalpgdrvivtgilrvvleKrektpifrkilevnhiepvsk >4pog_H:Nucleic_acid-binding_proteins; title=MCM-SSDNA CO-CRYSTAL STRUCTURE organism=Pyrococcus furiosus DNA sequence DT(Y10) DT(Y9) DT(Y8) DT(Y7) DT(Y6) DT(Y1) DT(Y2) DT(Y3) DT(Y4):DT(Y6) DT(Y5) chainH (125) ARG124 0 0 0 4 3 0 0 0 3 0 (128) GLU127 0 35 0 0 0 0 0 0 0 0 (130) LYS129 0 2 0 0 0 0 0 0 0 0 (187) ARG186 0 0 0 0 8 0 0 0 8 0 (200) MET199 0 0 0 0 0 0 0 0 5 0 (202) ARG201 0 0 0 0 0 0 0 0 0 3 (203) PHE202 0 0 0 0 3 0 0 0 3 33 (242) ARG241 0 0 0 0 0 0 0 0 0 1 prot.sequence svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtRvgEiKpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfRiqdrpetlkggeMpRFidgillddivdvalpgdrvivtgilrvvlekrektpifRkilevnhiepvsk >4pog_KL:Nucleic_acid-binding_proteins; title=MCM-SSDNA CO-CRYSTAL STRUCTURE organism=Pyrococcus furiosus DNA sequence DT(V1) DT(V2) DT(V3) DT(V4) chainK (125) ARG124 0 3 4 0 (187) ARG186 0 7 0 0 (202) ARG201 2 0 0 0 (203) PHE202 33 3 0 0 (234) LYS233 0 0 3 0 chainL (128) GLU127 28 0 0 0 (130) LYS129 2 0 0 0 prot.sequence svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtRvgeikpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfRiqdrpetlkggempRFidgillddivdvalpgdrvivtgilrvvleKrektpifrkilevnhiepvsk/svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtrvgEiKpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfriqdrpetlkggemprfidgillddivdvalpgdrvivtgilrvvlekrektpifrkilevnhiepvsk >4ppx_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA E295K WITH SPIROIMINODIHYDANTOIN IN TEMPLATING POSITION organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 26) HIS34 37 0 0 0 0 ( 27) LYS35 9 0 0 0 0 ( 30) ALA38 5 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpskeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftinkytirplageplpvdsekdifdyiqwkyrepkdrse >4pqu_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH RNA/DNA AND DATP organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(P805) DT(P806) DC(P807) DC(P808) DC(P809) DT(P810) DG(P811) DT(P812) DT(P813) DC(P814) DG(P815) DG(P816) DG(P817) DC(P818) DG(P819) DC(P820) DC(P821) DG(P822) chainA (115) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (184) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (475) GLN475 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggn/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >4pqu_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH RNA/DNA AND DATP organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DG(F805) DT(F806) DC(F807) DC(F808) DC(F809) DT(F810) DG(F811) DT(F812) DT(F813) DC(F814) DG(F815) DG(F816) DG(F817) DC(F818) DG(F819) DC(F820) DC(F821) DG(F822) chainC (115) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (184) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (475) GLN475 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggn/spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfSvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymDDlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >4ptf_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY CRYSTAL STRUCTURE OF YEAST DNA POLYMERASE EPSILON WITH TEMPLATE G organism=Saccharomyces cerevisiae DNA sequence DT(P2):DA(T15) DC(P3):DG(T14) DC(P4):DG(T13) DT(P5):DA(T12) DC(P6):DG(T11) DC(P7):DG(T10) DC(P8):DG(T9) DC(P9):DG(T8) DT(P10):DA(T7) DA(P11):DT(T6) chainA (894) LYS967 0 0 0 0 0 0 0 0 5 5 (915) ARG988 0 0 0 0 0 0 7 7 0 0 prot.sequence yalsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqetnqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnarniynkvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafdiettkpplkfpdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwvkrdsylpqgsqglkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgtgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasmypnimttnrlqpdsikaerdarklkwawrgeffpskmdeynmikralqnetfpnknkfskkkvltfdelsyadqvihikkrlteysrkvyhrvkvseivereaivcqrenpfyvdtvksfrdrryefkglaktwkgnlskidpsdkhardeakkmivlydslqlahkvilnsfygyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKryavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenrsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrkia >4pu3_ABCD:lambda_repressor-like_DNA-binding_domains; title=SHEWANELLA ONEIDENSIS MR-1 TOXIN ANTITOXIN SYSTEM HIPA, HIPB AND ITS OPERATOR DNA COMPLEX (SPACE GROUP P212121) organism=SHEWANELLA ONEIDENSIS DNA sequence DA(Q1):DT(P24) DA(Q2):DT(P23) DA(Q4):DT(P22) DG(Q5):DC(P21) DT(Q6):DA(P20) DG(Q7):DC(P19) DT(Q8):DT(P17) DG(Q10):DC(P16) DA(Q11):DT(P15) DT(Q12):DA(P14) DA(Q13):DT(P13) DA(Q14):DT(P12) DG(Q15):DC(P11) DT(Q16):DA(P10) DA(Q17):DT(P9) DC(Q18):DT(P7) DC(Q20):DG(P6) DC(Q21):DG(P5) DT(Q22):DA(P4) DA(Q23):DT(P3) DA(Q24):DT(P2) chainA chainB chainD ( 36) THR54 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS55 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS56 0 0 0 0 0 0 7 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ILE59 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) TYR68 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 chainC ( 26) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 36) THR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 37) LYS55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 ( 38) LYS56 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 2 3 0 0 0 0 ( 41) ILE59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 50) TYR68 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence tlemhlgdlmigelsfdatadtfavhytkdwqqsgfplsptipldgtgtsnqismflvnllpenkgldylieslgvskgntfaliraigldtagaiafvpkgallpetqlrpikaeeviqriedptmwpmeiwdgkprlvagvqpklnlfyngkefafaegtlssthivkfekyhhlvinefitmrlakvlgmnvanvdivhfgrykalcverfdrrnipgeqrvlrrhivdscqalgfsvskkyernfgtgrdvkdiregvsfnrlfslaakcrnpvaakqdmlqwalfnlltgnadahgknysffmtpsgmeptpwydlvsvdmyedfeqqlamaiddefdpnsiyayqlaafmdglglprnllisnltriarripqaiaevilmlppldedeasfvahyktqllarcerylgfvdevrdvev/tlemhlgdlmigelsfdatadtfavhytkdwqqsgfplsptipldgtgtsnqismflvnllpenkgldylieslgvskgntfaliraigldtagaiafvpkgallpetqlrpikaeeviqriedptmwpmeiwdgkprlvagvqpklnlfyngkefafaegtlssthivkfekyhhlvinefitmrlakvlgmnvanvdivhfgrykalcverfdrrnipgeqrvlrrhivdscqalgfsvskkyernfgtgrdvkdiregvsfnrlfslaakcrnpvaakqdmlqwalfnlltgnadahgknysffmtpsgmeptpwydlvsvdmyedfeqqlamaiddefdpnsiyayqlaafmdglglprnllisnltriarripqaiaevilmlppldedeasfvahyktqllarcerylgfvdevrdvev/imasplnqqslgllikerrksaaltQdvaamlcgvTKKtlIrvekgedvYistvfkildglgidivsagwy/imasplnqqslgllikerrksaaltqdvaamlcgvTKKtlIrvekgedvYistvfkildglgidivsagwy >4pu3_C:lambda_repressor-like_DNA-binding_domains; title=SHEWANELLA ONEIDENSIS MR-1 TOXIN ANTITOXIN SYSTEM HIPA, HIPB AND ITS OPERATOR DNA COMPLEX (SPACE GROUP P212121) organism=SHEWANELLA ONEIDENSIS DNA sequence DT(P2):DA(Q24) DT(P3):DA(Q23) DA(P4):DT(Q22) DG(P5):DC(Q21) DG(P6):DC(Q20) DT(P7):DC(Q18) DT(P9):DA(Q17) DA(P10):DT(Q16) DC(P11):DG(Q15) DT(P12):DA(Q14) DT(P13):DA(Q13) DA(P14):DT(Q12) DT(P15):DA(Q11) DC(P16):DG(Q10) DT(P17):DT(Q8) DC(P19):DG(Q7) DA(P20):DT(Q6) DC(P21):DG(Q5) DT(P22):DA(Q4) DT(P23):DA(Q2) DT(P24):DA(Q1) chainC ( 26) GLN44 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR54 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS55 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS56 0 0 0 0 3 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ILE59 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) TYR68 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence imasplnqqslgllikerrksaaltQdvaamlcgvTKKtlIrvekgedvYistvfkildglgidivsagwy >4pu4_ABCD:lambda_repressor-like_DNA-binding_domains; title=SHEWANELLA ONEIDENSIS MR-1 TOXIN ANTITOXIN SYSTEM HIPA, HIPB AND ITS OPERATOR DNA COMPLEX (SPACE GROUP P21) organism=SHEWANELLA ONEIDENSIS DNA sequence DA(Q2):DT(P24) DA(Q3):DT(P23) DA(Q4):DT(P22) DG(Q5):DC(P21) DT(Q6):DA(P20) DG(Q7):DC(P19) DT(Q8):DA(P18) DA(Q9):DT(P17) DG(Q10):DC(P16) DA(Q11):DT(P15) DT(Q12):DA(P14) DA(Q13):DT(P13) DA(Q14):DT(P12) DG(Q15):DC(P11) DT(Q16):DA(P10) DA(Q17):DT(P9) DC(Q18):DG(P8) DA(Q19):DT(P7) DC(Q20):DG(P6) DC(Q21):DG(P5) DT(Q22):DA(P4) DA(Q23):DT(P3) DA(Q24):DT(P2) DT(Q25):DA(P1) chainA chainB chainD ( 26) GLN45 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR55 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS57 0 0 0 0 0 0 8 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) TYR69 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 chainC ( 26) GLN45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 ( 36) THR55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 ( 37) LYS56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 ( 38) LYS57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 6 0 0 0 0 0 0 ( 41) ILE60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 50) TYR69 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ltlemhlgdlmigelsfdatadtfavhytkdwqqsgfplsptipldgtgtsnqismflvnllpenkgldylieslgvskgntfaliraigldtagaiafvpkgallpetqlrpikaeeviqriedptmwpprlvagvqpklnlfyngkefafaegtlssthivkfekyhhlvinefitmrlakvlgmnvanvdivhfgrykalcverfdrrnipgeqrvlrrhivdscqalgfsvskkyernfgtgrdvkdiregvsfnrlfslaakcrnpvaakqdmlqwalfnlltgnadahgknysffmtpsgmeptpwydlvsvdmyedfeqqlamaiddefdpnsiyayqlaafmdglglprnllisnltriarripqaiaevilmlppldedeasfvahyktqllarcerylgfvdevrdvev/ltlemhlgdlmigelsfdatadtfavhytkdwqqsgfplsptipldgtgtsnqismflvnllpenkgldylieslgvskgntfaliraigldtagaiafvpkgallpetqlrpikaeeviqriedptmwprlvagvqpklnlfyngkefafaegtlssthivkfekyhhlvinefitmrlakvlgmnvanvdivhfgrykalcverfdrrnipgeqrvlrrhivdscqalgfsvskkyernfgtgrdvkdiregvsfnrlfslaakcrnpvaakqdmlqwalfnlltgnadahgknysffmtpsgmeptpwydlvsvdmyedfeqqlamaiddefdpnsiyayqlaafmdglglprnllisnltriarripqaiaevilmlppldedeasfvahyktqllarcerylgfvdevrdvev/imasplnqqslgllikerrksaaltQdvaamlcgvTKKtlIrvekgedvYistvfkildglgidivsa/imasplnqqslgllikerrksaaltQdvaamlcgvTkKtlirvekgedvYistvfkildglgidivsaqtsdtetngw >4puo_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH RNA/DNA AND NEVIRAPINE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(P803) DA(P804) DG(P805) DT(P806) DC(P807) DC(P808) DC(P809) DT(P810) DG(P811) DT(P812) DT(P813) DC(P814) DG(P815) DG(P816) DG(P817) DC(P818) DG(P819) DC(P820) DC(P821) chainA (449) ARG448 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) GLN475 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >4puo_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH RNA/DNA AND NEVIRAPINE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(F803) DA(F804) DG(F805) DT(F806) DC(F807) DC(F808) DC(F809) DT(F810) DG(F811) DT(F812) DT(F813) DC(F814) DG(F815) DG(F816) DG(F817) DC(F818) DG(F819) DC(F820) DC(F821) chainC (476) GLN475 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >4pw5_AB:PUA_domain-like; title=STRUCTURE OF UHRF2-SRA IN COMPLEX WITH A 5HMC-CONTAINING DNA, COMPLEX I organism=Homo sapiens DNA sequence DC(D2):DG(C12) DA(D3):DT(C11) DT(D4):DA(C10) DC(D5):DG(C9) DC(D6):DG(C8) DG(D7):DC(C6) DG(D8):DT(C5) DA(D9):DG(C4) DC(D10):DG(C3) DC(D11):DT(C2) DA(D12):DC(C1) chainA ( 35) VAL475 0 0 0 0 1 6 2 0 0 0 0 chainB ( 52) ALA492 0 0 0 0 0 0 0 0 0 0 2 ( 55) PHE495 0 0 0 0 0 0 0 0 0 0 2 ( 58) GLU498 0 0 0 0 0 0 0 0 0 0 6 ( 67) TYR507 0 0 0 0 0 0 0 0 0 0 20 ( 68) THR508 0 0 0 0 0 0 0 0 0 0 2 prot.sequence ivpsnhygpipgipvgstwrfrvqvseagvhrphVggihgrsndgayslvlaggfadevdrgdeftytgsggsadqtltnmnralalncdaplddkigaesrnwragkpvrvirsfkgrkiskyapeegnrydgiykvvkywpeissshgflvwryllrrddvepapwtsegiersrrlclrlqypagy/ivpsnhygpipgipvgstwrfrvqvseagvhrphvggihgrsndgayslvlAggFadEvdrgdeftYTgsgsadqtltnmnralalncdaplddkigaesrnwragkpvrvirsfkgrkiskyapeegnrydgiykvvkywpeissshgflvwryllrrddvepapwtsegiersrrlclrlqypagy >4pw5_EF:PUA_domain-like; title=STRUCTURE OF UHRF2-SRA IN COMPLEX WITH A 5HMC-CONTAINING DNA, COMPLEX I organism=Homo sapiens DNA sequence DC(H2):DG(G12) DA(H3):DT(G11) DT(H4):DA(G10) DC(H5):DG(G9) DC(H6):DG(G8) DG(H7):DC(G6) DG(H8):DT(G5) DA(H9):DG(G4) DC(H10):DG(G3) DC(H11):DT(G2) DA(H12):DC(G1) chainE ( 34) VAL475 0 0 0 0 0 6 2 0 0 0 0 chainF ( 51) ALA492 0 0 0 0 0 0 0 0 0 0 2 ( 54) PHE495 0 0 0 0 0 0 0 0 0 0 4 ( 57) GLU498 0 0 0 0 0 0 0 0 0 0 6 ( 66) TYR507 0 0 0 0 0 0 0 0 0 0 20 ( 67) THR508 0 0 0 0 0 0 0 0 0 0 2 prot.sequence vpsnhygpipgipvgstwrfrvqvseagvhrphVggihgrsndgayslvlaggfadevdrgdeftytgsggsadqtltnmnralalncdaplddkigaesrnwragkpvrvirsfkgrkiskyapeegnrydgiykvvkywpeissshgflvwryllrrddvepapwtsegiersrrlclrlqypagy/vpsnhygpipgipvgstwrfrvqvseagvhrphvggihgrsndgayslvlAggFadEvdrgdeftYTgsgsadqtltnmnralalncdaplddkigaesrnwragkpvrvirsfkgrkiskyapeegnrydgiykvvkywpeissshgflvwryllrrddvepapwtsegiersrrlclrlqypagy >4pw6_A:PUA_domain-like; title=STRUCTURE OF UHRF2-SRA IN COMPLEX WITH A 5HMC-CONTAINING DNA, COMPLEX II organism=Homo sapiens DNA sequence DA(D1):DT(C12) DA(D2):DT(C11) DC(D3):DG(C10) DT(D4):DA(C9) DT(D5):DA(C8) DC(D6):DG(C7) DG(D7):DT(C5) DA(D8):DA(C4) DT(D9):DG(C3) DC(D10):DT(C2) DA(D11):DG(C1) chainA ( 34) HIS474 0 0 0 0 0 0 0 3 0 0 0 ( 35) VAL475 0 0 0 0 0 0 8 3 0 0 0 prot.sequence ivpsnhygpipgipvgstwrfrvqvseagvhrpHVggihgrsndgayslvlaggfadevdrgdeftytgssadqtltnmnralalncdaplddkigaesrnwragkpvrvirsfkgrkiskyapeegnrydgiykvvkywpeissshgflvwryllrrddvepapwtsegiersrrlclrlqypagyp >4pw6_AB:PUA_domain-like; title=STRUCTURE OF UHRF2-SRA IN COMPLEX WITH A 5HMC-CONTAINING DNA, COMPLEX II organism=Homo sapiens DNA sequence DA(D1):DT(C12) DA(D2):DT(C11) DC(D3):DG(C10) DT(D4):DA(C9) DT(D5):DA(C8) DC(D6):DG(C7) DG(D7):DT(C5) DA(D8):DA(C4) DT(D9):DG(C3) DC(D10):DT(C2) DA(D11):DG(C1) chainA ( 34) HIS474 0 0 0 0 0 0 0 3 0 0 0 ( 35) VAL475 0 0 0 0 0 0 8 3 0 0 0 chainB ( 34) HIS474 0 0 0 0 0 3 0 0 0 0 0 ( 35) VAL475 0 0 0 0 1 5 4 0 0 0 0 ( 52) ALA492 0 0 0 0 0 2 0 0 0 0 0 ( 55) PHE495 0 0 0 0 0 7 0 0 0 0 0 ( 58) GLU498 0 0 0 0 0 8 0 0 0 0 0 ( 67) TYR507 0 0 0 0 0 18 0 0 0 0 0 ( 68) THR508 0 0 0 0 0 1 0 0 0 0 0 prot.sequence ivpsnhygpipgipvgstwrfrvqvseagvhrpHVggihgrsndgayslvlaggfadevdrgdeftytgssadqtltnmnralalncdaplddkigaesrnwragkpvrvirsfkgrkiskyapeegnrydgiykvvkywpeissshgflvwryllrrddvepapwtsegiersrrlclrlqypagyp/ivpsnhygpipgipvgstwrfrvqvseagvhrpHVggihgrsndgayslvlAggFadEvdrgdeftYTgssadqtltnmnralalncdaplddkigaesrnwragkpvrvirsfkgrkiskyapeegnrydgiykvvkywpeissshgflvwryllrrddvepapwtsegiersrrlclrlqypagyp >4pw7_AB:PUA_domain-like; title=STRUCTURE OF UHRF2-SRA IN COMPLEX WITH A 5MC-CONTAINING DNA organism=Homo sapiens DNA sequence DC(D2):DG(C12) DA(D3):DT(C11) DT(D4):DA(C10) DC(D5):DG(C9) DC(D6):DG(C8) DG(D7):5CM(C7) DG(D8):DC(C6) DA(D9):DT(C5) DC(D10):DG(C4) DC(D11):DG(C3) DA(D12):DT(C2) chainA ( 35) VAL475 0 0 0 0 0 0 6 0 0 0 0 ( 52) ALA492 0 0 0 0 0 2 0 0 0 0 0 ( 55) PHE495 0 0 0 0 0 7 0 0 0 0 0 ( 58) GLU498 0 0 0 0 0 6 0 0 0 0 0 ( 67) TYR507 0 0 0 0 0 23 0 0 0 0 0 ( 68) THR508 0 0 0 0 0 2 0 0 0 0 0 ( 70) SER510 0 0 0 0 0 1 0 0 0 0 0 ( 75) ARG520 0 0 0 0 72 13 27 0 0 0 0 ( 76) ILE521 0 0 0 0 6 0 0 0 0 0 0 chainB prot.sequence ivpsnhygpipgipvgstwrfrvqvseagvhrphVggihgrsndgayslvlaggfadevdrgdeftytgsggkkRIgapsadqtltnmnralalncdaplddkigaesrnwragkpvrvirsfkgrkiskyapeegnrydgiykvvkywpeissshgflvwryllrrddvepapwtsegiersrrlclrlqypagyp/ivpsnhygpipgipvgstwrfrvqvseagvhrphVggihgrsndgayslvlaggfadevdrgdeftytgsgsadQTltnmnralalncdaplddkigaesrnwragkpvrvirsfkgrkiskyapeegnrydgiykvvkywpeissshgflvwryllrrddvepapwtsegiersrrlclrlqypagyp >4pw7_E:PUA_domain-like; title=STRUCTURE OF UHRF2-SRA IN COMPLEX WITH A 5MC-CONTAINING DNA organism=Homo sapiens DNA sequence DT(G2):DA(H12) DG(G3):DC(H11) DG(G4):DC(H10) DT(G5):DA(H9) DC(G6):DG(H8) 5CM(G7):DG(H7) DG(G8):DC(H6) DG(G9):DC(H5) DA(G10):DT(H4) DT(G11):DA(H3) DG(G12):DC(H2) chainE ( 37) VAL475 0 0 0 0 14 0 0 0 0 0 0 ( 54) ALA492 0 0 0 0 0 2 0 0 0 0 0 ( 57) PHE495 0 0 0 0 0 7 0 0 0 0 0 ( 60) GLU498 0 0 0 0 0 6 0 0 0 0 0 ( 69) TYR507 0 0 0 0 0 25 0 0 0 0 0 ( 70) THR508 0 0 0 0 0 2 0 0 0 0 0 ( 72) SER510 0 0 0 0 0 1 0 0 0 0 0 ( 76) ARG520 0 0 0 0 58 15 33 0 0 0 0 ( 77) ILE521 0 0 0 0 0 0 2 0 0 0 0 prot.sequence ctivpsnhygpipgipvgstwrfrvqvseagvhrphVggihgrsndgayslvlaggfadevdrgdeftytgsggkRIgapsadqtltnmnralalncdaplddkigaesrnwragkpvrvirsfkgrkiskyapeegnrydgiykvvkywpeissshgflvwryllrrddvepapwtsegiersrrlclrlqypagyp >4pw7_EF:PUA_domain-like; title=STRUCTURE OF UHRF2-SRA IN COMPLEX WITH A 5MC-CONTAINING DNA organism=Homo sapiens DNA sequence DC(H2):DG(G12) DA(H3):DT(G11) DT(H4):DA(G10) DC(H5):DG(G9) DC(H6):DG(G8) DG(H7):5CM(G7) DG(H8):DC(G6) DA(H9):DT(G5) DC(H10):DG(G4) DC(H11):DG(G3) DA(H12):DT(G2) chainE ( 37) VAL475 0 0 0 0 0 0 7 0 0 0 0 ( 54) ALA492 0 0 0 0 0 2 0 0 0 0 0 ( 57) PHE495 0 0 0 0 0 7 0 0 0 0 0 ( 60) GLU498 0 0 0 0 0 6 0 0 0 0 0 ( 69) TYR507 0 0 0 0 0 25 0 0 0 0 0 ( 70) THR508 0 0 0 0 0 2 0 0 0 0 0 ( 72) SER510 0 0 0 0 0 1 0 0 0 0 0 ( 76) ARG520 0 0 0 0 66 15 29 0 0 0 0 ( 77) ILE521 0 0 0 0 4 0 0 0 0 0 0 chainF prot.sequence ctivpsnhygpipgipvgstwrfrvqvseagvhrphVggihgrsndgayslvlaggfadevdrgdeftytgsggkRIgapsadqtltnmnralalncdaplddkigaesrnwragkpvrvirsfkgrkiskyapeegnrydgiykvvkywpeissshgflvwryllrrddvepapwtsegiersrrlclrlqypagyp/ctivpsnhygpipgipvgstwrfrvqvseagvhrphVggihgrsndgayslvlaggfadevdrgdeftytgsgsaDQtltnmnralalncdaplddkigaesrnwragkpvrvirsfkgrkiskyapeegnrydgiykvvkywpeissshgflvwryllrrddvepapwtsegiersrrlclrlqypagyp >4pwd_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH BULGE-RNA/DNA AND NEVIRAPINE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(P803) DA(P804) DG(P805) DT(P806) DC(P807) DC(P808) DC(P809) DT(P810) DG(P811) DT(P812) DT(P813) DC(P814) DG(P815) DG(P816) DG(P817) DC(P818) DG(P819) DC(P820) DC(P821) chainA (231) MET230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (476) GLN475 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlPekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >4pwd_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH BULGE-RNA/DNA AND NEVIRAPINE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(F803) DA(F804) DG(F805) DT(F806) DC(F807) DC(F808) DC(F809) DT(F810) DG(F811) DT(F812) DT(F813) DC(F814) DG(F815) DG(F816) DG(F817) DC(F818) DG(F819) DC(F820) DC(F821) chainC (231) MET230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (476) GLN475 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlPekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >4pxi_ABCD:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=ELUCIDATION OF THE STRUCTURAL AND FUNCTIONAL MECHANISM OF ACTION OF THE TETR FAMILY PROTEIN, CPRB FROM S. COELICOLOR A3(2) organism=STREPTOMYCES COELICOLOR DNA sequence DA(E3):DT(F20) DT(E4):DA(F19) DA(E5):DT(F18) DC(E6):DG(F17) DG(E7):DC(F16) DG(E8):DC(F15) DG(E9):DC(F14) DA(E10):DT(F13) DC(E11):DG(F12) DG(E12):DC(F11) DC(E13):DG(F10) DC(E14):DG(F9) DC(E15):DG(F8) DC(E16):DG(F7) DG(E17):DC(F6) DT(E18):DA(F5) DT(E19):DA(F4) DT(E20):DA(F3) DA(E21):DT(F2) chainA ( 43) TYR47 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 38) THR42 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 39) LYS43 0 0 0 0 0 0 0 0 0 0 2 7 5 1 0 0 0 0 0 ( 43) TYR47 0 0 0 0 0 0 0 0 0 0 0 0 13 5 0 0 0 0 0 ( 44) PHE48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 chainC ( 2) ARG6 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR42 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS43 0 0 0 0 0 0 1 4 5 1 0 0 0 0 0 0 0 0 0 ( 43) TYR47 0 0 0 0 0 0 5 16 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE48 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 36) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 1 0 0 ( 40) TYR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 6 0 0 prot.sequence lraeqtratiigaaadlfdrrgyesttlseivahagvtkgalYfhfaakedlahaileiqsrtsrrlakdldgrgysslealmrltfgmarlcvqgpvlraglrlatapvrpplphpftewreiatsrlldavrqsdvhqdidvdsvahtlvcsvvgtreprrlaemwyilirgmvpvtrraryvtlaarleqe/lraeqtratiigaaadlfdrrgyesttlseivahagvTKgalYFhfaakedlahaileiqsrtsrrlakdldgrgysslealmrltfgmarlcvqgpvlraglrlatagvpvrpplphpftewreiatsrlldavrqsdvhqdidvdsvahtlvcsvvgtrtlepagreprrlaemwyilirgmvpvtrraryvtlaarleqet/lRaeqtratiigaaadlfdrrgyesttlseivahagvTKgalYFhfaakedlahaileiqsrtsrrlakdldgrgysslealmrltfgmarlcvqgpvlraglrlatagvvrpplphpftewreiatsrlldavrqsdvhqdidvdsvahtlvcsvvgtrvvgreprrlaemwyilirgmvpvtrraryvtlaarleqet/eqtratiigaaadlfdrrgyesttlseivahagvtKgalYfhfaakedlahaileiqsrtsrrlakdldysslealmrltfgmarlcvqgpvlraglrlatagvpvrlphpftewreiatsrlldavrqsdvhqdidvdsvahtlvcsvvgtrvagreprrlaemwyilirgmvpvtrraryvtlaarleqet >4pxi_B:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=ELUCIDATION OF THE STRUCTURAL AND FUNCTIONAL MECHANISM OF ACTION OF THE TETR FAMILY PROTEIN, CPRB FROM S. COELICOLOR A3(2) organism=STREPTOMYCES COELICOLOR DNA sequence DA(E3):DT(F20) DT(E4):DA(F19) DA(E5):DT(F18) DC(E6):DG(F17) DG(E7):DC(F16) DG(E8):DC(F15) DG(E9):DC(F14) DA(E10):DT(F13) DC(E11):DG(F12) DG(E12):DC(F11) DC(E13):DG(F10) DC(E14):DG(F9) DC(E15):DG(F8) DC(E16):DG(F7) DG(E17):DC(F6) DT(E18):DA(F5) DT(E19):DA(F4) DT(E20):DA(F3) DA(E21):DT(F2) chainB ( 38) THR42 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 39) LYS43 0 0 0 0 0 0 0 0 0 0 2 7 5 1 0 0 0 0 0 ( 43) TYR47 0 0 0 0 0 0 0 0 0 0 0 0 13 5 0 0 0 0 0 ( 44) PHE48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 prot.sequence lraeqtratiigaaadlfdrrgyesttlseivahagvTKgalYFhfaakedlahaileiqsrtsrrlakdldgrgysslealmrltfgmarlcvqgpvlraglrlatagvpvrpplphpftewreiatsrlldavrqsdvhqdidvdsvahtlvcsvvgtrtlepagreprrlaemwyilirgmvpvtrraryvtlaarleqet >4py5_A:Ribonuclease_H-like; title=THERMOVIBRIO AMMONIFICANS RNASE H3 IN COMPLEX WITH 19-MER RNA/DNA organism=THERMOVIBRIO AMMONIFICANS DNA sequence DG(C1) DG(C2) DA(C3) DA(C4) DT(C5) DC(C6) DA(C7) DG(C8) DG(C9) DT(C10) DG(C11) DT(C12) DC(C13) DG(C14) DC(C15) DA(C16) DC(C17) DT(C18) DC(C19) chainA ( 44) TYR43 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS82 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 (242) ASN241 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 prot.sequence smklsssekekllkklkalgakeekppehaqyrlrlndailtvYksgsvvyggkgreklkelvaetvlsdtelprigcneagKgefvgplvvacivadekclkrlielgvkdskklsnekveelaseitetchgkvkllipekynrayskfkniNrlleavyreivsdlcekfspkvvvvdkfsnraeevlkdvvkgarlevrpkaeddlavaaasivakavrlktmkelekrfkvklpegNtglaellkktpkelheklfklhfsv >4pzi_A: title=ZINC FINGER REGION OF MLL2 IN COMPLEX WITH CPG DNA organism=HOMO SAPIENS DNA sequence DG(B1):DC(C12) DC(B2):DG(C11) DC(B3):DG(C10) DA(B4):DT(C9) DC(B5):DG(C8) DC(B6):DG(C7) DG(B7):DC(C6) DG(B8):DC(C5) DT(B9):DA(C4) DG(B10):DC(C3) DG(B11):DC(C2) DC(B12):DG(C1) chainA ( 7) ARG962 0 0 0 0 0 0 4 10 9 0 0 0 ( 42) LYS997 0 0 0 0 0 12 12 13 0 0 0 0 ( 43) GLN998 0 0 0 0 2 6 5 0 0 0 0 0 prot.sequence hhgkkmRmarcghcrgclrvqdcgscvncldkpkfggpntkKQccvyrkcdkiearkmerl >4q0b_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GAP- RNA/DNA AND NEVIRAPINE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(P803) DA(P804) DG(P805) DT(P806) DC(P807) DC(P808) DC(P809) DT(P810) DG(P811) DT(P812) DT(P813) DC(P814) DG(P815) DG(P816) DG(P817) DC(P818) DG(P819) DC(P820) DC(P821) chainA (449) ARG448 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) GLN475 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >4q0b_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GAP- RNA/DNA AND NEVIRAPINE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(P803) DA(P804) DG(P805) DT(P806) DC(P807) DC(P808) DC(P809) DT(P810) DG(P811) DT(P812) DT(P813) DC(P814) DG(P815) DG(P816) DG(P817) DC(P818) DG(P819) DC(P820) DC(P821) chainA (449) ARG448 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) GLN475 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >4q0b_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GAP- RNA/DNA AND NEVIRAPINE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(F803) DA(F804) DG(F805) DT(F806) DC(F807) DC(F808) DC(F809) DT(F810) DG(F811) DT(F812) DT(F813) DC(F814) DG(F815) DG(F816) DG(F817) DC(F818) DG(F819) DC(F820) DC(F821) chainC (231) MET230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (476) GLN475 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlPekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >4q0w_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=HE CATALYTIC CORE OF RAD2 IN COMPLEX WITH DNA SUBSTRATE (COMPLEX II) organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(D1):DT(C15) DA(D2):DT(C14) DG(D3):DC(C13) DG(D4):DC(C12) DT(D5):DA(C11) DG(D6):DC(C10) DG(D7):DC(C9) DA(D8):DT(C8) DC(D9):DG(C7) DG(D10):DC(C6) DG(D11):DC(C5) DA(D12):DT(C4) DT(D13):DA(C3) DC(D14):DG(C2) DA(D15):DT(C1) chainA ( 32) ILE33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 35) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 36) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 ( 39) LYS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 40) ALA41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence gvhsfwdiagptarpvrlesledkrmavdasIwiYQflKAvrdqnavknshitgffrrickllyfgirpvfvfdggvpvlkretirqrkerrqgkredevtmdmikevqellsrfgipyitapmeaeaqcaellqlnlvdgiitddsdvflfggtkiyknmfheknyvefydaesilkllgldrknmielaqllgsdytnglkgmgpvssieviaefgnlknfkdwynngqfdkrkqetenkfekdlrkklvnneiildddfpsvmvydaymrpevdhdttpfvwgvpdldmlrsfmktqlgwpheksdeilipli >4q0w_AB:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=HE CATALYTIC CORE OF RAD2 IN COMPLEX WITH DNA SUBSTRATE (COMPLEX II) organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(C1):DA(D15) DG(C2):DC(D14) DA(C3):DT(D13) DT(C4):DA(D12) DC(C5):DG(D11) DC(C6):DG(D10) DG(C7):DC(D9) DT(C8):DA(D8) DC(C9):DG(D7) DC(C10):DG(D6) DA(C11):DT(D5) DC(C12):DG(D4) DC(C13):DG(D3) DT(C14):DA(D2) DT(C15):DT(D1) chainA ( 32) ILE33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) TYR36 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN37 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS40 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA41 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 32) ILE33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 35) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 36) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 prot.sequence gvhsfwdiagptarpvrlesledkrmavdasIwiYQflKAvrdqnavknshitgffrrickllyfgirpvfvfdggvpvlkretirqrkerrqgkredevtmdmikevqellsrfgipyitapmeaeaqcaellqlnlvdgiitddsdvflfggtkiyknmfheknyvefydaesilkllgldrknmielaqllgsdytnglkgmgpvssieviaefgnlknfkdwynngqfdkrkqetenkfekdlrkklvnneiildddfpsvmvydaymrpevdhdttpfvwgvpdldmlrsfmktqlgwpheksdeilipli/gvhsfwdiagptarpvrlesledkrmavdasIwiYQflvknshitgffrrickllyfgirpvfvfdggvpvlkretirqrkekrdsdevtmdmikevqellsrfgipyitapmeaeaqcaellqlnlvdgiitddsdvflfggtkiyknmfheknyvefydaesilkllgldrknmielaqllgsdytnglkgmgpvssieviaefgnlknfkdwynngqetenkfekdlrkklvnneiildddfpsvmvydaymrpevdhdttpfvwgvpdldmlrsfmktqlgwpheksdeiliplird >4q0z_AB:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=THE CATALYTIC CORE OF RAD2 IN COMPLEX WITH DNA SUBSTRATE (COMPLEX III) organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(C1):DC(D15) DC(C2):DG(D14) DT(C3):DA(D13) DC(C4):DG(D12) DC(C5):DG(D11) DC(C6):DG(D10) DT(C7):DA(D9) DT(C8):DA(D8) DG(C9):DC(D7) DT(C10):DA(D6) DC(C11):DG(D5) DT(C12):DA(D4) DC(C13):DG(D3) DA(C14):DT(D2) DG(C15):DC(D1) chainA ( 35) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 36) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 ( 39) LYS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 40) ALA41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 chainB ( 35) TYR36 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN37 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS40 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA41 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvhsfwdiagptarpvrlesledkrmavdasiwiYQflKAvrdqegnavknshitgffrrickllyfgirpvfvfdggvpvlkretirqrkerrqgkresaksdevtmdmikevqellsrfgipyitapmeaeaqcaellqlnlvdgiitddsdvflfggtkiyknmfheknyvefydaesilkllgldrknmielaqllgsdytnglkgmgpvssieviaefgnlknfkdwynngqfdkrkqetenkfekdlrkklvnneiildddfpsvmvydaymrpevdhdttpfvwgvpdldmlrsfmktqlgwpheksdeilipli/gvhsfwdiagptarpvrlesledkrmavdasiwiYQflKAvrdqnavknshitgffrrickllyfgirpvfvfdggvpvlkretirqsdevtmdmikevqellsrfgipyitapmeaeaqcaellqlnlvdgiitddsdvflfggtkiyknmfheknyvefydaesilkllgldrknmielaqllgsdytnglkgmgpvssieviaefgnlknfkdwynngqfdkrkqetenkfekdlrkklvnneiildddfpsvmvydaymrpevdhdttpfvwgvpdldmlrsfmktqlgwpheksdeilipli >4q0z_EF:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=THE CATALYTIC CORE OF RAD2 IN COMPLEX WITH DNA SUBSTRATE (COMPLEX III) organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(H1):DG(G15) DT(H2):DA(G14) DG(H3):DC(G13) DA(H4):DT(G12) DG(H5):DC(G11) DA(H6):DT(G10) DC(H7):DG(G9) DA(H8):DT(G8) DA(H9):DT(G7) DG(H10):DC(G6) DG(H11):DC(G5) DG(H12):DC(G4) DA(H13):DT(G3) DG(H14):DC(G2) DC(H15):DG(G1) chainE ( 35) TYR36 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN37 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS40 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA41 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 35) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 36) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 ( 39) LYS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 40) ALA41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence gvhsfwdiagptarpvrlesledkrmavdasiwiYQflKAvrdqeavknshitgffrrickllyfgirpvfvfdggvpvlkretirqrkdevtmdmikevqellsrfgipyitapmeaeaqcaellqlnlvdgiitddsdvflfggtkiyknmfheknyvefydaesilkllgldrknmielaqllgsdytnglkgmgpvssieviaefgnlknfkdwynngqfdkqetenkfekdlrkklvnneiildfpsvmvydaymrpevdhdttpfvwgvpdldmlrsfmktqlgwpheksdeilipli/gvhsfwdiagptarpvrlesledkrmavdasiwiYQflKAvravknshitgffrrickllyfgirpvfvfdggvpvlkretirqrkerdevtmdmikevqellsrfgipyitapmeaeaqcaellqlnlvdgiitddsdvflfggtkiyknmfheknyvefydaesilkllgldrknmielaqllgsdytnglkgmgpvssieviaefgnlknfkdwynngqfdkrkqetenkfekdlrkklvnneiildddfpsvmvydaymrpevdhdttpfvwgvpdldmlrsfmktqlgwpheksdeilipli >4q0z_F:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=THE CATALYTIC CORE OF RAD2 IN COMPLEX WITH DNA SUBSTRATE (COMPLEX III) organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(G1):DC(H15) DC(G2):DG(H14) DT(G3):DA(H13) DC(G4):DG(H12) DC(G5):DG(H11) DC(G6):DG(H10) DT(G7):DA(H9) DT(G8):DA(H8) DG(G9):DC(H7) DT(G10):DA(H6) DC(G11):DG(H5) DT(G12):DA(H4) DC(G13):DG(H3) DA(G14):DT(H2) DG(G15):DC(H1) chainF ( 35) TYR36 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN37 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS40 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA41 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvhsfwdiagptarpvrlesledkrmavdasiwiYQflKAvravknshitgffrrickllyfgirpvfvfdggvpvlkretirqrkerdevtmdmikevqellsrfgipyitapmeaeaqcaellqlnlvdgiitddsdvflfggtkiyknmfheknyvefydaesilkllgldrknmielaqllgsdytnglkgmgpvssieviaefgnlknfkdwynngqfdkrkqetenkfekdlrkklvnneiildddfpsvmvydaymrpevdhdttpfvwgvpdldmlrsfmktqlgwpheksdeilipli >4q10_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=THE CATALYTIC CORE OF RAD2 IN COMPLEX WITH DNA SUBSTRATE (COMPLEX IV) organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(D1):DG(C15) DT(D2):DA(C14) DG(D3):DC(C13) DA(D4):DT(C12) DG(D5):DC(C11) DA(D6):DT(C10) DC(D7):DG(C9) DA(D8):DT(C8) DA(D9):DT(C7) DG(D10):DC(C6) DG(D11):DC(C5) DG(D12):DC(C4) DA(D13):DT(C3) DG(D14):DC(C2) DC(D15):DG(C1) chainA ( 36) GLN37 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS40 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA41 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvhsfwdiagptarpvrlesledkrmavdasiwiyQflKAvrvknshitgffrrickllyfgirpvfvfdggvpvlkretirqdevtmdmikevqellsrfgipyitapmeaeaqcaellqlnlvdgiitddsdvflfggtkiyknmfhvefydaesilkllgldrknmielaqllgsdytnglkgmgpvssieviaefgnlknfkdwynngqfdkrkqetenkfekdlrkklvnneiildddfpsvmvydaymrpevdhdttpfvwgvpdldmlrsfmktqlgwpheksdeiliplird >4q10_AB:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=THE CATALYTIC CORE OF RAD2 IN COMPLEX WITH DNA SUBSTRATE (COMPLEX IV) organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(D1):DG(C15) DT(D2):DA(C14) DG(D3):DC(C13) DA(D4):DT(C12) DG(D5):DC(C11) DA(D6):DT(C10) DC(D7):DG(C9) DA(D8):DT(C8) DA(D9):DT(C7) DG(D10):DC(C6) DG(D11):DC(C5) DG(D12):DC(C4) DA(D13):DT(C3) DG(D14):DC(C2) DC(D15):DG(C1) chainA ( 36) GLN37 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS40 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA41 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 35) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 36) GLN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 39) LYS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 ( 40) ALA41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence gvhsfwdiagptarpvrlesledkrmavdasiwiyQflKAvrvknshitgffrrickllyfgirpvfvfdggvpvlkretirqdevtmdmikevqellsrfgipyitapmeaeaqcaellqlnlvdgiitddsdvflfggtkiyknmfhvefydaesilkllgldrknmielaqllgsdytnglkgmgpvssieviaefgnlknfkdwynngqfdkrkqetenkfekdlrkklvnneiildddfpsvmvydaymrpevdhdttpfvwgvpdldmlrsfmktqlgwpheksdeiliplird/gvhsfwdiagptarpvrlesledkrmavdasiwiYQflKAvrdavknshitgffrrickllyfgirpvfvfdggvpvlkretirdevtmdmikevqellsrfgipyitapmeaeaqcaellqlnlvdgiitddsdvflfggtkiyknmfheknyvefydaesilkllgldrknmielaqllgsdytnglkgmgpvssieviaefgnlknfkdwynngqfnkfekdlrkklvnneiildddfpsvmvydaymrpevdhdttpfvwgvpdldmlrsfmktqlgwpheksdeilipli >4q43_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POLYMERASE-DAMAGED DNA COMPLEX organism=Escherichia coli DNA sequence DG(G841):DC(H873) DG(G842):DC(H872) DG(G843):DC(H871) DT(G844):DA(H870) DC(G845):DG(H869) DC(G846):DG(H868) DT(G847):DA(H867) DA(G848):DT(H866) DG(G849):DC(H865) DG(G850):DC(H864) DA(G851):DT(H863) DC(G852):DG(H862) DC(G853):DG(H861) DC(G854):DG(H860) chainF (247) GLU246 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 6 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgvistanyparkfgvrsamptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >4q44_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POLYMERASE-DAMAGED DNA COMPLEX organism=ESCHERICHIA COLI DNA sequence DA(B840):DC(C873) DG(B842):DC(C872) DG(B843):DC(C871) DT(B844):DA(C870) DC(B845):DG(C869) DC(B846):DG(C868) DT(B847):DA(C867) DA(B848):DT(C866) DG(B849):DC(C865) DG(B850):DC(C864) DA(B851):DT(C863) DC(B852):DG(C862) DC(B853):DG(C861) DC(B854):DA(C859) chainA ( 41) VAL40 15 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER42 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA56 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) GLU246 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (300) THR299 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalalcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqacdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqtTqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >4q45_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE- DAMAGED DNA COMPLEX organism=Escherichia coli DNA sequence DG(C860):DC(B854) DG(C861):DC(B853) DG(C862):DC(B852) DT(C863):DA(B851) DC(C864):DG(B850) DC(C865):DG(B849) DT(C866):DA(B848) DA(C867):DT(B847) DG(C868):DC(B846) DG(C869):DC(B845) DA(C870):DT(B844) DC(C871):DG(B842) DC(C872):DG(B841) DC(C873):DA(B840) chainA ( 41) VAL40 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 43) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 57) ALA56 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (247) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (286) ARG285 0 0 0 0 0 0 4 0 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalalcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqacdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >4q4z_CDF: title=THERMUS THERMOPHILUS RNA POLYMERASE DE NOVO TRANSCRIPTION INITIATION COMPLEX organism=THERMUS THERMOPHILUS DNA sequence DT(G3):DA(H25) DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) DG(G14):DG(H14) DT(G15):DT(H13) DG(G16):DC(H12) DC(G17):DG(H11) DA(G18):DA(H10) DG(G19):DG(H9) DC(G20):DG(H8) chainC (136) ARG142 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 (161) LYS167 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (165) TRP171 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 (181) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 (237) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 9 1 (250) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 (319) ILE325 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (320) ASP326 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (325) ARG331 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (412) LEU418 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (415) GLU421 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (421) VAL427 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 chainD (703) ALA705 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (704) PRO706 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (1236) MET1238 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 chainF ( 2) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 ( 4) VAL81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 5) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 ( 8) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (244) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (247) GLU324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 (249) ASP326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 (250) SER327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 (255) PHE332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpKrgpWidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavaYvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtrERagfdVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltMrtfhtggitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpVRqyLheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdEkDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >4q4z_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=THERMUS THERMOPHILUS RNA POLYMERASE DE NOVO TRANSCRIPTION INITIATION COMPLEX organism=THERMUS THERMOPHILUS DNA sequence DT(G3):DA(H25) DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) DG(G14):DG(H14) DT(G15):DT(H13) DG(G16):DC(H12) DC(G17):DG(H11) DA(G18):DA(H10) DG(G19):DG(H9) DC(G20):DG(H8) chainF ( 2) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 ( 4) VAL81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 5) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 ( 8) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (244) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (247) GLU324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 (249) ASP326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 (250) SER327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 (255) PHE332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 prot.sequence sDpVRqyLheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdEkDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >4q5s_CDF: title=THERMUS THERMOPHILUS RNA POLYMERASE INITIALLY TRANSCRIBING COMPLEX CONTAINING 6-MER RNA organism=THERMUS THERMOPHILUS DNA sequence DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) DA(H25):DT(G3) chainC (414) GLU421 14 0 0 0 0 0 0 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrEragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/evrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvaPgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfl >4q5v_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE CATALYTIC CORE OF HUMAN DNA POLYMERASE ALPHA IN TERNARY COMPLEX WITH AN RNA-PRIMED DNA TEMPLATE AND APHIDICOLIN organism=Homo sapiens DNA sequence DA(C109) DG(C110) DG(C111) DC(C112) DG(C113) DC(C114) DT(C115) DC(C116) DC(C117) DA(C118) DG(C119) DG(C120) DC(C121) chainA (443) ARG784 0 30 0 0 0 0 0 0 0 0 0 0 0 (468) ARG834 0 0 0 14 12 1 0 0 0 0 0 0 0 (576) SER955 0 7 0 0 0 0 0 0 0 0 0 0 0 (578) TYR957 0 0 1 0 0 0 0 0 0 0 0 0 0 (580) CYS959 0 2 0 0 0 0 0 0 0 0 0 0 0 (674) LYS1053 0 0 0 0 7 0 0 0 0 0 0 0 0 prot.sequence eqvfhfywldayedqynqpgvvflfgkvwiesaethvsccvmvkniertlyflpremkidlntgketgtpismkdvyeefdekiatkykimkfkskpveknyafeipdvpekseylevkysaempqlpqdlkgetfshvfgtntsslelflmnrkikgpcwlevkspqllnqpvswckaeamalkpdlvnvikdvsppplvvmafsmktmqnaknhqneiiamaalvhhsfaldkaapkppfqshfcvvskpkdcifpyafkeviekknvkvevaatertllgfflakvhkidpdiivghniygfelevllqrinvckaphwskigrlkrsnmpklgfgernatcgrmicdveisakelircksyhlselvqqilktervvipmeniqnmysessqllyllehtwkdakfilqimcelnvlplalqitniagnimsrtlmggRserneflllhafyennyivpdkqiRkkaayagglvldpkvgfydkfillldfnslYpsiiqefnicfttvqrveqipelpdpslemgilpreirklverrkqvkqlmkqqdlnpdlilqydirqkalkltanSmYgClgfsysrfyakplaalvtykgreilmhtkemvqkmnleviygdtdsimintnstnleevfklgnkvksevnklyklleididgvfksllllkkKkyaalvveptsdgnyvtkqelkgldivrrdwcdlakdtgnfvigqilsdqsrdtiveniqkrlieigenvlngsvpvsqfeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtvsyvicqdgsnltasqrayapeqlqkqdnltidtqyylaqqihpvvaricepidgidavliatwlgldpt >4q8e_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA INSERTING DCMPNPP OPPOSITE A PHENANTHRIPLATIN ADDUCTED G organism=Homo sapiens DNA sequence DC(T5):DG(P8) DT(T6):DA(P7) DC(T7):DG(P6) DA(T8):DT(P5) DC(T9):DG(P4) DA(T10):DT(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 4 4 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4q8f_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA EXTENDING PRIMER IMMEDIATELY AFTER A PHENANTHRIPLATIN ADDUCTED G organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DT(P3):DA(T10) DG(P4):DC(T9) DT(P5):DA(T8) DG(P6):DC(T7) DA(P7):DT(T6) DC(P8):DC(T4) chainA ( 38) GLN38 0 0 0 0 0 0 0 6 ( 48) ILE48 0 0 0 0 0 0 0 4 ( 61) ARG61 0 0 0 0 0 0 0 4 ( 62) SER62 0 0 0 0 0 0 0 1 (375) ARG382 0 3 5 0 0 0 0 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtRSmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdklsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4qcb_A:Uracil-DNA_glycosylase-like; title=PROTEIN-DNA COMPLEX OF VACCINIA VIRUS D4 WITH DOUBLE-STRANDED NON- SPECIFIC DNA organism=Vaccinia virus DNA sequence DA(C3):DT(D30) DA(C4):DT(D29) DA(C5):DT(D28) DC(C6):DG(D27) DG(C7):DC(D26) DT(C8):DA(D25) DT(C9):DA(D24) DT(C10):DA(D23) DG(C11):DC(D22) DC(C12):DG(D21) chainA (161) THR161 0 0 0 0 0 4 0 0 0 0 prot.sequence mnsvtvshapytityhndwepvmsqlvefynevaswllrdetspipdkffiqlkqplrnkrvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvipwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgkTdfsniraklespvttivgyhpafekdrsfeiinvlleldnkapinwaqgfiy >4qcb_AB:Uracil-DNA_glycosylase-like; title=PROTEIN-DNA COMPLEX OF VACCINIA VIRUS D4 WITH DOUBLE-STRANDED NON- SPECIFIC DNA organism=Vaccinia virus DNA sequence DA(C3):DT(D30) DA(C4):DT(D29) DA(C5):DT(D28) DC(C6):DG(D27) DG(C7):DC(D26) DT(C8):DA(D25) DT(C9):DA(D24) DT(C10):DA(D23) DG(C11):DC(D22) DC(C12):DG(D21) chainA (161) THR161 0 0 0 0 0 4 0 0 0 0 chainB (161) THR161 0 0 0 0 4 1 0 0 0 0 prot.sequence mnsvtvshapytityhndwepvmsqlvefynevaswllrdetspipdkffiqlkqplrnkrvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvipwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgkTdfsniraklespvttivgyhpafekdrsfeiinvlleldnkapinwaqgfiy/mnsvtvshapytityhndwepvmsqlvefynevaswllrdetspipdkffiqlkqplrnkrvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvipwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgkTdfsniraklespvttivgyhpafekdrsfeiinvlleldnkapinwaqgfiy >4qcl_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE CATALYTIC CORE OF HUMAN DNA POLYMERASE ALPHA IN TERNARY COMPLEX WITH AN RNA-PRIMED DNA TEMPLATE AND DCTP organism=HOMO SAPIENS DNA sequence DA(C109) DG(C110) DG(C111) DC(C112) DG(C113) DC(C114) DT(C115) DC(C116) DC(C117) DA(C118) DG(C119) DG(C120) DC(C121) chainA (443) ARG784 0 3 0 0 0 0 0 0 0 0 0 0 0 (468) ARG834 0 0 0 16 13 3 0 0 0 0 0 0 0 (572) LEU951 0 2 0 0 0 0 0 0 0 0 0 0 0 (575) ASN954 0 2 0 0 0 0 0 0 0 0 0 0 0 (576) SER955 0 11 0 0 0 0 0 0 0 0 0 0 0 (578) TYR957 0 2 1 0 0 0 0 0 0 0 0 0 0 (583) PHE962 9 0 0 0 0 0 0 0 0 0 0 0 0 (585) TYR964 22 0 0 0 0 0 0 0 0 0 0 0 0 (674) LYS1053 0 0 0 0 7 0 0 0 0 0 0 0 0 prot.sequence eqvfhfywldayedqynqpgvvflfgkvwiesaethvsccvmvkniertlyflpremkidlntgketgtpismkdvyeefdekiatkykimkfkskpveknyafeipdvpekseylevkysaempqlpqdlkgetfshvfgtntsslelflmnrkikgpcwlevkspqllnqpvswckaeamalkpdlvnvikdvsppplvvmafsmktmqnaknhqneiiamaalvhhsfaldkaapkppfqshfcvvskpkdcifpyafkeviekknvkvevaatertllgfflakvhkidpdiivghniygfelevllqrinvckaphwskigrlkrsnmpklgfgernatcgrmicdveisakelircksyhlselvqqilktervvipmeniqnmysessqllyllehtwkdakfilqimcelnvlplalqitniagnimsrtlmggRserneflllhafyennyivpdkqiRkkaayagglvldpkvgfydkfillldfnslYpsiiqefnicfttvqrveqipelpdpslemgilpreirklverrkqvkqlmkqqdlnpdlilqydirqkalkLtaNSmYgclgFsYsrfyakplaalvtykgreilmhtkemvqkmnleviygdtdsimintnstnleevfklgnkvksevnklyklleididgvfksllllkkKKyaalvveptsdgnyvtkqelkgldivrrDwcdlakdtgnfvigqilsdqsrdtiveniqkrlieigenvlngsvpvsqfeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtvsyvicqdgsnltasqrayapeqlqkqdnltidtqyylaqqihpvvaricepidgidavliatwlgldpt >4qen_A:SET_domain;PUA_domain-like; title=CRYSTAL STRUCTURE OF KRYPTONITE IN COMPLEX WITH MCHH DNA AND SAH organism=Arabidopsis thaliana DNA sequence DG(C1):DC(D13) DG(C2):DC(D12) DT(C3):DA(D11) DA(C4):DT(D10) DC(C5):DG(D9) DT(C6):DA(D8) 5CM(C7):DG(D7) DA(C8):DT(D6) DT(C9):DA(D5) DC(C10):DG(D4) chainA ( 28) ARG126 0 0 0 0 0 0 0 5 5 0 ( 77) TRP175 0 0 0 0 0 18 7 6 0 0 ( 78) LEU176 0 0 0 0 0 12 1 5 0 0 ( 81) ILE179 0 0 0 0 0 0 1 0 0 0 (106) SER204 0 0 0 0 0 0 1 0 0 0 (108) GLN206 0 0 0 0 0 0 4 0 0 0 (109) TYR207 0 0 0 0 0 0 37 0 0 0 (112) ASP210 0 0 0 0 0 0 11 0 0 0 (121) TYR219 0 0 0 0 0 0 26 0 0 0 (122) THR220 0 0 0 0 0 0 2 0 0 0 (129) LEU227 0 0 0 0 0 6 1 6 0 0 prot.sequence lephlkvtkclrlfnkqyllcvqaklsRpdlkgvtemikakailyprkiigdlpgidvghrffsraemcavgfhnhWLNgidymsmeyekeysnyklplavsivmsgqyeddldnadtvtytgqgghnLtgnkrqikdqllergnlalkhcceynvpvrvtrghnckssytkrvytydglykvekfwaqkgvsgftvykyrlkrlegqpelttdieglvcedisgglefkgipatnrvddspvsptsgftyiksliiepnviipksstgcncrgsctdskkcacaklnggnfpyvdlndgrliesrdvvfecgphcgcgpkcvnrtsqkrlrfnlevfrsakkgwavrsweyipagspvceyigvvrrtadvneyifeidcpefcidagstgnfarfinhscepnlfvqcvlsshqdirlarvvlfaadnispmqeltydygyaldsvhgpdgkvkqlacycgalncrkrly >4qeo_A:SET_domain;PUA_domain-like; title=CRYSTAL STRUCTURE OF KRYPTONITE IN COMPLEX WITH MCHH DNA, H3(1-15) PEPTIDE AND SAH organism=Arabidopsis thaliana DNA sequence DG(C1):DC(D13) DG(C2):DC(D12) DT(C3):DA(D11) DA(C4):DT(D10) DC(C5):DG(D9) DT(C6):DA(D8) 5CM(C7):DG(D7) DA(C8):DT(D6) DT(C9):DA(D5) DC(C10):DG(D4) chainA ( 28) ARG126 0 0 0 0 0 0 0 5 5 0 ( 77) TRP175 0 0 0 0 0 18 8 6 0 0 ( 78) LEU176 0 0 0 0 0 16 1 5 0 0 ( 79) ASN177 0 0 0 0 0 2 0 0 0 0 (106) SER204 0 0 0 0 0 0 1 0 0 0 (108) GLN206 0 0 0 0 0 0 4 0 0 0 (109) TYR207 0 0 0 0 0 0 32 0 0 0 (112) ASP210 0 0 0 0 0 0 11 0 0 0 (121) TYR219 0 0 0 0 0 0 26 0 0 0 (122) THR220 0 0 0 0 0 0 2 0 0 0 (124) GLN222 0 0 0 0 0 0 1 0 0 0 (129) LEU227 0 0 0 0 0 4 1 5 0 0 (130) THR228 0 0 0 0 0 0 0 2 3 0 prot.sequence lephlkvtkclrlfnkqyllcvqaklsRpdlkgvtemikakailyprkiigdlpgidvghrffsraemcavgfhnhWLNgidymsmeyekeysnyklplavsivmsgqyeddldnadtvtytgqgghnLTgnkrqikdqllergnlalkhcceynvpvrvtrghnckssytkrvytydglykvekfwaqkgvsgftvykyrlkrlegqpelttdieglvcedisgglefkgipatnrvddspvsptsgftyiksliiepnviipksstgcncrgsctdskkcacaklnggnfpyvdlndgrliesrdvvfecgphcgcgpkcvnrtsqkrlrfnlevfrsakkgwavrsweyipagspvceyigvvrrtadvneyifeidcpefcidagstgnfarfinhscepnlfvqcvlsshqdirlarvvlfaadnispmqeltydygyaldsvhgpdgkvkqlacycgalncrkrly >4qep_A:SET_domain;PUA_domain-like; title=CRYSTAL STRUCTURE OF KRYPTONITE IN COMPLEX WITH MCHG DNA AND SAH organism=Arabidopsis thaliana DNA sequence DG(D4):DC(C10) DC(D5):DG(C9) DT(D6):DA(C8) DG(D7):5CM(C7) DA(D8):DT(C6) DG(D9):DC(C5) DT(D10):DA(C4) DA(D11):DT(C3) DC(D12):DG(C2) DC(D13):DG(C1) chainA ( 28) ARG126 0 6 10 0 0 0 0 0 0 0 ( 77) TRP175 0 0 10 3 11 0 0 0 0 0 ( 78) LEU176 0 0 6 1 10 0 0 0 0 0 ( 79) ASN177 0 0 0 0 4 0 0 0 0 0 ( 81) ILE179 0 0 0 1 0 0 0 0 0 0 (106) SER204 0 0 0 3 0 0 0 0 0 0 (108) GLN206 0 0 0 5 0 0 0 0 0 0 (109) TYR207 0 0 0 33 0 0 0 0 0 0 (112) ASP210 0 0 0 11 0 0 0 0 0 0 (121) TYR219 0 0 0 24 0 0 0 0 0 0 (122) THR220 0 0 0 1 0 0 0 0 0 0 (129) LEU227 0 0 4 1 5 0 0 0 0 0 (130) THR228 0 4 0 0 0 0 0 0 0 0 (133) LYS231 0 2 0 0 0 0 0 0 0 0 prot.sequence lephlkvtkclrlfnkqyllcvqaklsRpdlkgvtemikakailyprkiigdlpgidvghrffsraemcavgfhnhWLNgidymsmeyekeysnyklplavsivmsgqyeddldnadtvtytgqgghnLTgnKrqikdqllergnlalkhcceynvpvrvtrghnckssytkrvytydglykvekfwaqkgvsgftvykyrlkrlegqpelttdeglvcedisgglefkgipatnrvddspvsptsgftyiksliiepnviipksstgcncrgsctdskkcacaklnggnfpyvdlndgrliesrdvvfecgphcgcgpkcvnrtsqkrlrfnlevfrsakkgwavrsweyipagspvceyigvvrrtadvneyifeidcpefcidagstgnfarfinhscepnlfvqcvlsshqdirlarvvlfaadnispmqeltydygyaldsvhkvkqlacycgalncrkrly >4qju_AB:IHF-like_DNA-binding_proteins; title=CRYSTAL STRUCTURE OF DNA-BOUND NUCLEOID ASSOCIATED PROTEIN, SAV1473 organism=Staphylococcus aureus DNA sequence DT(C1):DC(D21) DG(C2):DC(D20) DC(C3):DA(D19) DT(C4):DC(D18) DT(C5):DG(D17) DA(C6):DT(D16) DT(C7):DT(D15) DC(C8):DG(D14) DA(C9):DT(D13) DA(C10):DT(D12) DT(C11):DT(D11) DT(C12):DA(D10) DT(C13):DA(D9) DG(C14):DC(D8) DT(C15):DT(D7) DT(C16):DA(D6) DG(C17):DT(D5) DC(C18):DT(D4) DA(C19):DC(D3) DC(C20):DG(D2) DC(C21):DT(D1) chainA ( 58) ARG58 0 0 0 0 0 0 0 0 0 0 2 0 3 0 0 0 0 0 0 0 0 ( 61) ARG61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 12 0 0 0 0 ( 63) PRO63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 0 0 0 0 chainB ( 43) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 45) ILE45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 58) ARG58 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 ( 61) ARG61 0 0 0 0 11 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) PRO63 0 0 0 0 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnktdlinavaeqadltkkeagsavdavfesiqnslakgekvqligfgnfevreraaRkgRnPQtgkEidipaskvpafkagkalkdavk/mnktdlinavaeqadltkkeagsavdavfesiqnslakgekvQlIgfgnfevreraaRkgRnPqtgkEidipaskvpafkagkalkdavk >4qju_B:IHF-like_DNA-binding_proteins; title=CRYSTAL STRUCTURE OF DNA-BOUND NUCLEOID ASSOCIATED PROTEIN, SAV1473 organism=Staphylococcus aureus DNA sequence DT(C1):DC(D21) DG(C2):DC(D20) DC(C3):DA(D19) DT(C4):DC(D18) DT(C5):DG(D17) DA(C6):DT(D16) DT(C7):DT(D15) DC(C8):DG(D14) DA(C9):DT(D13) DA(C10):DT(D12) DT(C11):DT(D11) DT(C12):DA(D10) DT(C13):DA(D9) DG(C14):DC(D8) DT(C15):DT(D7) DT(C16):DA(D6) DG(C17):DT(D5) DC(C18):DT(D4) DA(C19):DC(D3) DC(C20):DG(D2) DC(C21):DT(D1) chainB ( 43) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 45) ILE45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 58) ARG58 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 ( 61) ARG61 0 0 0 0 11 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) PRO63 0 0 0 0 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnktdlinavaeqadltkkeagsavdavfesiqnslakgekvQlIgfgnfevreraaRkgRnPqtgkEidipaskvpafkagkalkdavk >4qlc_D:Histone-fold; title=CRYSTAL STRUCTURE OF CHROMATOSOME AT 3.5 ANGSTROM RESOLUTION organism=? DNA sequence DC(J2):DG(I166) DT(J3):DA(I165) DT(J4):DA(I164) DA(J5):DT(I163) DC(J6):DG(I162) DA(J7):DA(I160) DG(J9):DC(I159) DC(J10):DG(I158) DA(J11):DT(I157) DC(J12):DG(I156) DA(J13):DC(I154) DG(J14):DC(I153) DA(J16):DT(I152) DT(J17):DA(I151) DG(J18):DC(I150) DT(J19):DA(I149) DA(J20):DT(I148) DT(J21):DA(I147) DA(J22):DT(I146) DT(J23):DA(I145) DA(J24):DT(I144) DT(J25):DA(I143) DC(J26):DG(I142) DT(J27):DA(I141) DG(J28):DC(I140) DA(J29):DT(I139) DC(J30):DG(I138) DA(J31):DT(I137) DC(J32):DG(I136) DG(J33):DC(I135) DT(J34):DA(I134) DG(J35):DC(I133) DC(J36):DG(I132) DC(J37):DG(I131) DT(J38):DA(I130) DG(J39):DC(I129) DG(J40):DC(I128) DA(J41):DT(I127) DG(J42):DC(I126) DA(J43):DT(I125) DC(J44):DG(I124) DT(J45):DA(I123) DA(J46):DT(I122) DG(J47):DC(I121) DG(J48):DC(I120) DG(J49):DC(I119) DA(J50):DT(I118) DG(J51):DC(I117) DT(J52):DA(I116) DA(J53):DT(I115) DA(J54):DT(I114) DT(J55):DA(I113) DC(J56):DG(I112) DC(J57):DG(I111) DC(J58):DG(I110) DC(J59):DG(I109) DT(J60):DA(I108) DT(J61):DA(I107) DG(J62):DC(I106) DG(J63):DC(I105) DC(J64):DG(I104) DG(J65):DC(I103) DG(J66):DC(I102) DT(J67):DA(I101) DT(J68):DA(I100) DA(J69):DT(I99) DA(J70):DT(I98) DA(J71):DT(I97) DA(J72):DT(I96) DC(J73):DG(I95) DG(J74):DC(I94) DC(J75):DG(I93) DG(J76):DC(I92) DG(J77):DC(I91) DG(J78):DC(I90) DG(J79):DC(I89) DG(J80):DC(I88) DA(J81):DT(I87) DC(J82):DG(I86) DA(J83):DT(I85) DG(J84):DC(I84) DC(J85):DG(I83) DG(J86):DC(I82) DC(J87):DG(I81) DG(J88):DC(I80) DT(J89):DA(I79) DA(J90):DT(I78) DC(J91):DG(I77) DG(J92):DC(I76) DT(J93):DA(I75) DG(J94):DC(I74) DC(J95):DG(I73) DG(J96):DC(I72) DT(J97):DA(I71) DT(J98):DA(I70) DT(J99):DA(I69) DA(J100):DT(I68) DA(J101):DT(I67) DG(J102):DC(I66) DC(J103):DG(I65) DG(J104):DC(I64) DG(J105):DC(I63) DT(J106):DA(I62) DG(J107):DC(I61) DC(J108):DG(I60) DT(J109):DA(I59) DA(J110):DT(I58) DG(J111):DC(I57) DA(J112):DT(I56) DG(J113):DC(I55) DC(J114):DG(I54) DT(J115):DA(I53) DG(J116):DC(I52) DT(J117):DA(I51) DC(J118):DG(I50) DT(J119):DA(I49) DA(J120):DT(I48) DC(J121):DG(I47) DG(J122):DC(I46) DA(J123):DT(I45) DC(J124):DG(I44) DC(J125):DG(I43) DA(J126):DT(I42) DA(J127):DT(I41) DT(J128):DA(I40) DT(J129):DA(I39) DG(J130):DC(I38) DA(J131):DT(I37) DG(J132):DC(I36) DC(J133):DG(I35) DG(J134):DC(I34) DG(J135):DC(I33) DC(J136):DG(I32) DC(J137):DG(I31) DT(J138):DA(I30) DC(J139):DG(I29) DG(J140):DC(I28) DG(J141):DC(I27) DC(J142):DG(I26) DA(J143):DT(I25) DC(J144):DG(I24) DC(J145):DG(I23) DG(J146):DC(I22) DG(J147):DC(I21) DG(J148):DC(I20) DT(J150):DT(I19) DT(J151):DA(I17) DC(J152):DG(I16) DT(J153):DA(I15) DC(J154):DG(I14) DC(J155):DG(I13) DA(J156):DT(I12) DG(J157):DC(I11) DG(J158):DC(I10) DG(J159):DC(I9) DC(J160):DG(I8) DG(J161):DC(I7) DG(J162):DC(I6) DC(J163):DG(I5) DC(J164):DG(I4) DA(J165):DT(I3) DG(J166):DC(I2) chainD ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >4qpq_ABCDEFGH:IHF-like_DNA-binding_proteins; title=MECHANISTIC BASIS OF PLASMID-SPECIFIC DNA BINDING OF THE F PLASMID REGULATORY PROTEIN, TRAM organism=Escherichia coli DNA sequence DA(P1):DT(Q28) DT(P2):DA(Q27) DA(P3):DT(Q26) DC(P4):DG(Q25) DC(P5):DG(Q24) DG(P6):DC(Q23) DC(P7):DG(Q22) DT(P8):DA(Q21) DA(P9):DT(Q20) DG(P10):DC(Q19) DG(P11):DC(Q18) DG(P12):DC(Q17) DG(P13):DC(Q16) DC(P14):DG(Q15) DG(P15):DC(Q14) DC(P16):DG(Q13) DT(P17):DA(Q12) DG(P18):DC(Q11) DC(P19):DG(Q10) DT(P20):DA(Q9) DA(P21):DT(Q8) DG(P22):DC(Q7) DC(P23):DG(Q6) DG(P24):DC(Q5) DG(P25):DC(Q4) DT(P26):DA(Q3) DG(P27):DC(Q2) DC(P28):DG(Q1) chainA ( 2) LYS3 0 0 0 0 1 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ASN5 0 0 5 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR7 0 13 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 0 0 0 0 0 0 0 0 0 0 0 ( 4) ASN5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 14 3 0 0 0 0 0 0 0 chainC ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 5 0 0 0 0 0 0 0 0 0 ( 4) ASN5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 3 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 0 0 0 0 0 0 0 17 11 1 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) LYS3 0 0 3 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ASN5 0 0 0 0 1 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 11 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) LYS3 0 0 0 0 0 0 0 0 0 5 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ASN5 0 0 0 0 0 0 0 0 0 0 0 1 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 0 0 0 0 0 0 0 12 21 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 0 0 ( 4) ASN5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 17 12 0 0 0 0 0 0 chainG ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 1 0 0 0 0 ( 4) ASN5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 4 0 0 ( 6) TYR7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 19 0 chainH ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 8 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ASN5 0 0 0 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 0 1 16 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aKvNlYisndayekinaiiekrrqegarekdvsfsatasmllelglrvhe/aKvNlYisndayekinaiiekrrqegarekdvsfsatasmllelglrvheaq/aKvNlYisndayekinaiiekrrqegarekdvsfsatasmllelglrvheaq/aKvNlYisndayekinaiiekrrqegarekdvsfsatasmllelglrvheaq/aKvNlYisndayekinaiiekrrqegarekdvsfsatasmllelglrvhe/aKvNlYisndayekinaiiekrrqegarekdvsfsatasmllelglrvheaq/aKvNlYisndayekinaiiekrrqegarekdvsfsatasmllelglrvhe/aKvNlYisndayekinaiiekrrqegarekdvsfsatasmllelglrvhea >4qpq_H:IHF-like_DNA-binding_proteins; title=MECHANISTIC BASIS OF PLASMID-SPECIFIC DNA BINDING OF THE F PLASMID REGULATORY PROTEIN, TRAM organism=Escherichia coli DNA sequence DA(P1):DT(Q28) DT(P2):DA(Q27) DA(P3):DT(Q26) DC(P4):DG(Q25) DC(P5):DG(Q24) DG(P6):DC(Q23) DC(P7):DG(Q22) DT(P8):DA(Q21) DA(P9):DT(Q20) DG(P10):DC(Q19) DG(P11):DC(Q18) DG(P12):DC(Q17) DG(P13):DC(Q16) DC(P14):DG(Q15) DG(P15):DC(Q14) DC(P16):DG(Q13) DT(P17):DA(Q12) DG(P18):DC(Q11) DC(P19):DG(Q10) DT(P20):DA(Q9) DA(P21):DT(Q8) DG(P22):DC(Q7) DC(P23):DG(Q6) DG(P24):DC(Q5) DG(P25):DC(Q4) DT(P26):DA(Q3) DG(P27):DC(Q2) DC(P28):DG(Q1) chainH ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 8 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ASN5 0 0 0 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR7 0 0 0 0 0 0 0 1 16 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aKvNlYisndayekinaiiekrrqegarekdvsfsatasmllelglrvhea >4qr9_AB: title=CRYSTAL STRUCTURE OF TWO HMGB1 BOX A DOMAINS COOPERATING TO UNDERWIND AND KINK A DNA organism=RATTUS NORVEGICUS DNA sequence DA(C1):DT(D20) DT(C2):DA(D19) DA(C3):DT(D18) DT(C4):DA(D17) DC(C5):DG(D16) DG(C6):DC(D15) DA(C7):DT(D14) DT(C8):DA(D13) DA(C9):DT(D12) DT(C10):DA(D11) DA(E1):DT(F20) DT(E2):DA(F19) DA(E3):DT(F18) DT(E4):DA(F17) DC(E5):DG(F16) DG(E6):DC(F15) DA(E7):DT(F14) DT(E8):DA(F13) DA(E9):DT(F12) DT(E10):DA(F11) chainA ( 15) VAL19 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) PHE37 0 0 0 0 25 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) PHE40 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) SER41 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 11) TYR15 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) VAL19 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) PHE37 0 0 0 0 13 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) PHE40 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) SER41 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gskprgkmSsyaffVqtcreehkkkhpdasvnFseFSkkcserwktmsakekgkfedmakadkaryeremktyip/gskprgkmSsYaffVqtcreehkkkhpdasvnFseFSkkcserwktmsakekgkfedmakadkaryeremktyip >4qr9_B:HMG-box; title=CRYSTAL STRUCTURE OF TWO HMGB1 BOX A DOMAINS COOPERATING TO UNDERWIND AND KINK A DNA organism=? DNA sequence DA(C1):DT(D20) DT(C2):DA(D19) DA(C3):DT(D18) DT(C4):DA(D17) DC(C5):DG(D16) DG(C6):DC(D15) DA(C7):DT(D14) DT(C8):DA(D13) DA(C9):DT(D12) DT(C10):DA(D11) DA(E1):DT(F20) DT(E2):DA(F19) DA(E3):DT(F18) DT(E4):DA(F17) DC(E5):DG(F16) DG(E6):DC(F15) DA(E7):DT(F14) DT(E8):DA(F13) DA(E9):DT(F12) DT(E10):DA(F11) chainB ( 11) TYR15 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) VAL19 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) PHE37 0 0 0 0 13 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) PHE40 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) SER41 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gskprgkmSsYaffVqtcreehkkkhpdasvnFseFSkkcserwktmsakekgkfedmakadkaryeremktyip >4qtj_A: title=COMPLEX OF WOPR DOMAIN OF WOR1 IN CANDIDA ALBICANS WITH THE 13BP DSDNA organism=Candida albicans SC5314 DNA sequence DA(C1):DT(B13) DA(C2):DT(B12) DG(C3):DC(B11) DT(C4):DA(B10) DT(C5):DA(B9) DA(C6):DT(B8) DA(C7):DT(B7) DA(C8):DT(B6) DC(C9):DG(B5) DT(C10):DA(B4) DT(C11):DA(B3) DT(C12):DA(B2) DT(C13):DA(B1) chainA ( 61) ARG65 0 0 0 0 8 7 15 0 0 0 0 0 0 ( 71) SER75 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 72) ARG76 0 0 0 0 0 0 0 0 0 0 8 0 0 ( 73) ILE77 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 78) LEU82 0 0 0 0 0 0 0 0 3 1 0 0 0 ( 80) TYR84 0 0 0 0 0 0 0 4 0 0 0 0 0 prot.sequence mivptyngyihntrdalaviqqvldkqlepvsrrpherergvlivsgsvfvfieqssgikRwtdgiswspSRIqgrfLvYgeldkkglvkktitlttttkelhmegkaekqtihlisyyskqdidsgklqrpsesdlkhvqispalwtmvqens >4qtk_A: title=COMPLEX OF WOPR DOMAIN OF WOR1 IN CANDIDA ALBICANS WITH THE 17BP DSDNA organism=Candida albicans SC5314 DNA sequence DA(D1):DT(C17) DA(D2):DT(C16) DG(D3):DC(C15) DT(D4):DA(C14) DT(D5):DA(C13) DA(D6):DT(C12) DA(D7):DT(C11) DA(D8):DT(C10) DC(D9):DG(C9) DT(D10):DA(C8) DT(D11):DA(C7) DT(D12):DA(C6) DT(D13):DA(C5) DT(D14):DA(C4) DT(D15):DA(C3) DG(D16):DC(C2) DA(D17):DT(C1) chainA ( 60) ARG65 0 0 0 0 7 8 13 0 0 0 0 0 0 0 0 0 0 ( 70) SER75 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 71) ARG76 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 72) ILE77 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 ( 77) LEU82 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 79) TYR84 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 prot.sequence ivptyngyihntrdalaviqqvldkqlepvsrrpherergvlivsgsvfvfieqssgikRwtdgiswspSRIqgrfLvYgeglvkktitlttttkelhmegkaekqtihlisyyskqdidsgklqrpsesdlkhvqispalwtmv >4qtr_AB:Homeodomain-like; title=COMPUTATIONAL DESIGN OF CO-ASSEMBLING PROTEIN-DNA NANOWIRES organism=DROSOPHILA MELANOGASTER DNA sequence DT(E2):DA(F16) DG(E3):DC(F15) DT(E4):DA(F14) DA(E5):DT(F13) DA(E6):DT(F12) DT(E7):DA(F11) DT(E8):DA(F10) DT(E9):DA(F9) DA(E10):DT(F8) DA(E11):DT(F7) DT(E12):DA(F6) DT(E13):DA(F5) DT(E14):DA(F4) DC(E15):DG(F3) chainA chainB ( 42) ILE47 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 46) ASN51 0 0 0 0 0 0 0 0 10 8 0 0 0 0 prot.sequence rtafseeqkkaldlafyfdryltpewrrylsqrlglneaqikiwfqnkrakikks/tafseeqkkaldlafyfdryltpewrrylsqrlglneaqikIwfqNkrakikks >4qtr_CD:Homeodomain-like; title=COMPUTATIONAL DESIGN OF CO-ASSEMBLING PROTEIN-DNA NANOWIRES organism=DROSOPHILA MELANOGASTER DNA sequence DG(H2):DC(G16) DG(H3):DC(G15) DA(H4):DT(G14) DA(H5):DT(G13) DA(H6):DT(G12) DT(H7):DA(G11) DT(H8):DA(G10) DA(H9):DT(G9) DA(H10):DT(G8) DA(H11):DT(G7) DT(H12):DA(G6) DT(H13):DA(G5) DA(H14):DT(G4) DC(H15):DG(G3) DA(H16):DT(G2) chainC ( 43) ILE47 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 47) ASN51 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 chainD ( 43) ILE47 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 ( 47) ASN51 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 prot.sequence rtafseeqkkaldlafyfdryltpewrrylsqrlglneaqikIwfqNkrakikkstg/rtafseeqkkaldlafyfdryltpewrrylsqrlglneaqikIwfqNkrakikks >4qtr_D:Homeodomain-like; title=COMPUTATIONAL DESIGN OF CO-ASSEMBLING PROTEIN-DNA NANOWIRES organism=DROSOPHILA MELANOGASTER DNA sequence DT(G2):DA(H16) DG(G3):DC(H15) DT(G4):DA(H14) DA(G5):DT(H13) DA(G6):DT(H12) DT(G7):DA(H11) DT(G8):DA(H10) DT(G9):DA(H9) DA(G10):DT(H8) DA(G11):DT(H7) DT(G12):DA(H6) DT(G13):DA(H5) DT(G14):DA(H4) DC(G15):DG(H3) DC(G16):DG(H2) chainD ( 43) ILE47 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 47) ASN51 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 prot.sequence rtafseeqkkaldlafyfdryltpewrrylsqrlglneaqikIwfqNkrakikks >4qw8_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY CRYSTAL STRUCTURES OF A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND D-DCTP organism=Sulfolobus solfataricus DNA sequence DG(D6):DC(C13) DA(D7):DT(C12) DG(D8):DC(C11) DT(D9):DA(C10) DC(D10):DG(C9) DC(D11):DG(C8) DT(D12):DA(C7) DG(D13):DC(C6) DT(D14):DA(C5) DA(D15):DT(C4) DG(D16):DC(C3) DC(D17):DG(C2) DC(D18):DG(C1) chainA (244) SER244 0 0 0 1 0 0 0 0 0 0 0 0 0 (332) ARG332 3 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrKevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivSrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >4qw9_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY CRYSTAL STRUCTURES OF A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND (-)FTC-PPNP organism=Sulfolobus solfataricus DNA sequence DG(C1):DC(D18) DG(C2):DC(D17) DC(C3):DG(D16) DT(C4):DA(D15) DA(C5):DT(D14) DC(C6):DG(D13) DA(C7):DT(D12) DG(C8):DC(D11) DG(C9):DC(D10) DA(C10):DT(D9) DC(C11):DG(D8) DT(C12):DA(D7) DC(C13):DG(D6) chainA (244) SER244 0 0 0 0 0 0 0 0 0 1 0 0 0 (332) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 2 (336) ARG336 0 0 0 0 0 0 0 0 0 1 2 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >4qwa_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY CRYSTAL STRUCTURES OF A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND (-)3TC-DP organism=Sulfolobus solfataricus DNA sequence DG(D6):DC(C13) DA(D7):DT(C12) DG(D8):DC(C11) DT(D9):DA(C10) DC(D10):DG(C9) DC(D11):DG(C8) DT(D12):DA(C7) DG(D13):DC(C6) DT(D14):DA(C5) DA(D15):DT(C4) DG(D16):DC(C3) DC(D17):DG(C2) DC(D18):DG(C1) chainA (244) SER244 0 0 0 1 0 0 0 0 0 0 0 0 0 (332) ARG332 2 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 2 1 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrKevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >4qwb_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF DPO4 LINKER REGION P236A MUTANT WITH AN INCOMING D-DCDP organism=Sulfolobus solfataricus DNA sequence DG(B1):DC(C18) DG(B2):DC(C17) DC(B3):DG(C16) DT(B4):DA(C15) DA(B5):DT(C14) DC(B6):DG(C13) DA(B7):DT(C12) DG(B8):DC(C11) DG(B9):DC(C10) DA(B10):DT(C9) DC(B11):DG(C8) DT(B12):DA(C7) chainA (244) SER244 0 0 0 0 0 0 0 0 0 1 0 0 (336) ARG336 0 0 0 0 0 0 0 0 0 1 2 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeyneairtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfiea >4qwc_D:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY CRYSTAL STRUCTURES OF A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOBUS SOLFATARICUS IN COMPLES WITH DNA AND L-DCDP organism=Saccharolobus solfataricus P2 DNA sequence DA(F7):DT(E12) DG(F8):DC(E11) DT(F9):DA(E10) DC(F10):DG(E9) DC(F11):DG(E8) DT(F12):DA(E7) DG(F13):DC(E6) DT(F14):DA(E5) DA(F15):DT(E4) DG(F16):DC(E3) DC(F17):DG(E2) DC(F18):DG(E1) chainD (244) SER244 0 0 1 0 0 0 0 0 0 0 0 0 (336) ARG336 0 6 2 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfie >4qwd_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY CRYSTAL STRUCTURES OF A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND (-)3TC-PPNP organism=Sulfolobus solfataricus DNA sequence DG(D6):DC(C13) DA(D7):DT(C12) DG(D8):DC(C11) DT(D9):DA(C10) DC(D10):DG(C9) DC(D11):DG(C8) DT(D12):DA(C7) DG(D13):DC(C6) DT(D14):DA(C5) DA(D15):DT(C4) DG(D16):DC(C3) DC(D17):DG(C2) DC(D18):DG(C1) chainA (244) SER244 0 0 0 1 0 0 0 0 0 0 0 0 0 (332) ARG332 1 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 2 1 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrKevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >4qwe_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY CRYSTAL STRUCTURES OF A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND (-)FTC-DP organism=Sulfolobus solfataricus DNA sequence DG(D6):DC(C13) DA(D7):DT(C12) DG(D8):DC(C11) DT(D9):DA(C10) DC(D10):DG(C9) DC(D11):DG(C8) DT(D12):DA(C7) DG(D13):DC(C6) DT(D14):DA(C5) DA(D15):DT(C4) DG(D16):DC(C3) DC(D17):DG(C2) DC(D18):DG(C1) chainA (244) SER244 0 0 0 1 0 0 0 0 0 0 0 0 0 (332) ARG332 1 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 2 1 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >4qyz_C: title=CRYSTAL STRUCTURE OF A CRISPR RNA-GUIDED SURVEILLANCE COMPLEX, CASCADE, BOUND TO A SSDNA TARGET organism=ESCHERICHIA COLI DNA sequence DA(M5) DG(M6) DA(M7) DC(M8) DA(M9) DG(M10) DC(M11) DC(M12) DC(M13) DA(M14) DC(M15) DA(M16) DT(M17) DG(M18) DG(M19) DC(M20) DA(M21) DT(M22) DT(M23) DC(M24) DC(M25) DA(M26) DC(M27) DT(M28) DT(M29) DA(M30) DT(M31) DC(M32) DA(M33) DC(M34) DT(M35) DG(M36) DG(M37) chainC ( 21) ALA23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ARG100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 ( 92) ARG101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (114) HIS123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0 0 0 0 0 0 0 0 0 prot.sequence deidamalyrawqqldngscAqirRvsepdelrdipafyrlvqpfgwenprhqqallrmvfclsagknvirhqtgislgralansgrineRRifqliradrtadmvqlrrlltHaepvldwplmarmltwwgkrerqqlledfvlttnkn >4qz8_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=MOUSE TDT IN COMPLEX WITH A DSB SUBSTRATE, C-G BASE PAIR organism=MUS MUSCULUS DNA sequence DA(D1):DT(T5) DA(D2):DT(T4) DA(D3):DT(T3) DA(D4):DT(T2) DA(D5):DT(T1) chainA ( 42) LEU189 3 0 0 0 0 ( 43) ALA190 4 0 0 0 0 ( 46) ARG193 1 0 0 0 0 prot.sequence kkisqyacqrrttlnnynqlftdaldilaendelrenegscLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilestfvaldhfqkcflilkldhgrvhsgkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >4qz9_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=MOUSE TDT IN COMPLEX WITH A DSB SUBSTRATE, C-A BASE PAIR organism=MUS MUSCULUS DNA sequence DT(T1):DA(D5) DT(T2):DA(D4) DT(T3):DA(D3) DT(T4):DA(D2) DT(T5):DA(D1) chainA ( 41) SER187 0 0 0 0 1 ( 43) LEU189 0 0 0 0 3 ( 44) ALA190 0 0 0 0 3 ( 47) ARG193 0 0 0 0 3 prot.sequence vkkisqyacqrrttlnnynqlftdaldilaendelrenegScLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilestfekfkaldhfqkcflilkldhgrvhsegkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >4qza_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=MOUSE TDT IN COMPLEX WITH A DSB SUBSTRATE, C-C BASE PAIR organism=MUS MUSCULUS DNA sequence DT(T1):DA(D5) DT(T2):DA(D4) DT(T3):DA(D3) DT(T4):DA(D2) DT(T5):DA(D1) chainA ( 41) SER187 0 0 0 0 1 ( 43) LEU189 0 0 0 0 1 ( 44) ALA190 0 0 0 0 3 ( 47) ARG193 0 0 0 0 2 prot.sequence vkkisqyacqrrttlnnynqlftdaldilaendelrenegScLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilestfekfkqpsrkvdaldhfqkcflilkldhgrvhsgkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >4qzb_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=MOUSE TDT IN COMPLEX WITH A DSB SUBSTRATE, C-T BASE PAIR organism=MUS MUSCULUS DNA sequence DA(D1):DT(T5) DA(D2):DT(T4) DA(D3):DT(T3) DA(D4):DT(T2) DA(D5):DT(T1) chainA ( 43) LEU189 3 0 0 0 0 ( 44) ALA190 3 0 0 0 0 ( 47) ARG193 3 0 0 0 0 prot.sequence vkkisqyacqrrttlnnynqlftdaldilaendelrenegscLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilestfekfkqpsrkvdaldhfqkcflilkldhgrvhsqqegkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >4qzc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=MOUSE TDT, F405A MUTANT, IN COMPLEX WITH A DSB SUBSTRATE, C-G BASE PAIR organism=MUS MUSCULUS DNA sequence DA(D1):DT(T5) DA(D2):DT(T4) DA(D3):DT(T3) DA(D4):DT(T2) DA(D5):DT(T1) chainA ( 44) LEU189 3 0 0 0 0 ( 45) ALA190 4 0 0 0 0 ( 48) ARG193 2 0 0 0 0 prot.sequence avkkisqyacqrrttlnnynqlftdaldilaendelrenegscLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilestfekfdldhfqkcalilkldhgrvhqegkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >4qzd_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=MOUSE TDT, F405A MUTANT, IN COMPLEX WITH A DSB SUBSTRATE, C-C BASE PAIR organism=MUS MUSCULUS DNA sequence DA(D1):DT(T5) DA(D2):DT(T4) DA(D3):DT(T3) DA(D4):DT(T2) DA(D5):DT(T1) chainA ( 41) SER187 1 0 0 0 0 ( 43) LEU189 3 0 0 0 0 ( 44) ALA190 4 0 0 0 0 ( 47) ARG193 2 0 0 0 0 prot.sequence vkkisqyacqrrttlnnynqlftdaldilaendelrenegScLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilestfekfkdhfqkcalilkldhgrvhsgkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >4qze_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=MOUSE TDT, F401A MUTANT, IN COMPLEX WITH A DSB SUBSTRATE, C-G BASE PAIR organism=MUS MUSCULUS DNA sequence DA(D1):DT(T5) DA(D2):DT(T4) DA(D3):DT(T3) DA(D4):DT(T2) DA(D5):DT(T1) chainA ( 42) LEU189 3 0 0 0 0 ( 43) ALA190 4 0 0 0 0 ( 46) ARG193 3 0 0 0 0 prot.sequence kkisqyacqrrttlnnynqlftdaldilaendelrenegscLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilqkcflilkldhgrvhgkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >4qzf_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=MOUSE TDT, F401A MUTANT, IN COMPLEX WITH A DSB SUBSTRATE, C-A BASE PAIR organism=MUS MUSCULUS DNA sequence DT(T1):DA(D5) DT(T2):DA(D4) DT(T3):DA(D3) DT(T4):DA(D2) DT(T5):DA(D1) chainA ( 41) SER187 0 0 0 0 3 ( 43) LEU189 0 0 0 0 4 ( 44) ALA190 0 0 0 0 4 ( 47) ARG193 0 0 0 0 3 prot.sequence vkkisqyacqrrttlnnynqlftdaldilaendelrenegScLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilqkcflilkldhgrvhgkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >4qzg_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=MOUSE TDT, F401A MUTANT, IN COMPLEX WITH A DSB SUBSTRATE, C-C BASE PAIR organism=MUS MUSCULUS DNA sequence DT(T1):DA(D5) DT(T2):DA(D4) DT(T3):DA(D3) DT(T4):DA(D2) DT(T5):DA(D1) chainA ( 42) LEU189 0 0 0 0 4 ( 43) ALA190 0 0 0 0 4 ( 46) ARG193 0 0 0 0 3 prot.sequence kkisqyacqrrttlnnynqlftdaldilaendelrenegscLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilesdhaqkcflilkldhgrvhgkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >4qzh_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=MOUSE TDT, F401A MUTANT, IN COMPLEX WITH A DSB SUBSTRATE, C-T BASE PAIR organism=MUS MUSCULUS DNA sequence DA(D1):DT(T5) DA(D2):DT(T4) DA(D3):DT(T3) DA(D4):DT(T2) DA(D5):DT(T1) chainA ( 39) SER187 1 0 0 0 0 ( 41) LEU189 3 0 0 0 0 ( 42) ALA190 4 0 0 0 0 ( 45) ARG193 3 0 0 0 0 prot.sequence kisqyacqrrttlnnynqlftdaldilaendelrenegScLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilesqkcflilkldhgrvhsgkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >4r22_B:Putative_DNA-binding_domain; title=TNRA-DNA COMPLEX organism=Bacillus megaterium DNA sequence DC(G0) DG(G1) DT(G2) DG(G3) DT(G4) DA(G5) DA(G6) DG(G7) DG(G8) DA(G9) DA(G10) DT(G11) DT(G12) DC(G13) DT(G14) DG(G15) DA(G16) DC(G17) DA(G18) DC(G19) DG(G20) chainB ( 22) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 1 0 0 ( 25) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 prot.sequence syrdkkvmsigivkeltglseRqiRyyekrsllfpdrtntgirkysfsdverlmdiadrieegvqtseirtelakkdearkm >4r24_B:Putative_DNA-binding_domain; title=COMPLETE DISSECTION OF B. SUBTILIS NITROGEN HOMEOSTATIC CIRCUITRY organism=Bacillus megaterium DNA sequence DC(G0) DG(G1) DT(G2) DG(G3) DT(G4) DA(G5) DA(G6) DG(G7) DG(G8) DA(G9) DA(G10) DT(G11) DT(G12) DC(G13) DT(G14) DG(G15) DA(G16) DC(G17) DA(G18) DC(G19) DG(G20) chainB ( 23) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 ( 26) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 prot.sequence asyrdkkvmsigivkeltglseRqiRyyekrsllfpdrtntgirkysfsdverlmdiadrieegvqtseirtelakkdearkmke >4r28_C:Restriction_endonuclease-like; title=MSPJI RESTRICTION ENDONUCLEASE IN COMPLEX WITH 27-MER OLIGONUCLEOTIDE organism=Mycobacterium sp. JLS DNA sequence DG(X402):DC(Y426) DC(X403):DG(Y425) DC(X404):DG(Y424) 5CM(X405):DG(Y423) DG(X406):DC(Y422) DG(X407):DC(Y421) DG(X408):DC(Y420) DA(X409):DT(Y419) DA(X410):DT(Y418) DA(X411):DT(Y417) DT(X412):DA(Y416) DC(X413):DG(Y415) DT(X414):DA(Y414) DC(X415):DG(Y413) DT(X416):DA(Y412) DG(X417):DC(Y411) DC(X418):DG(Y410) DT(X419):DA(Y409) DG(X420):DC(Y408) DC(X421):DG(Y407) DA(X422):DT(Y406) DG(X423):DC(Y405) DA(X424):DT(Y404) DA(X425):DT(Y403) chainC ( 26) GLN33 0 0 0 0 4 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLU65 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ALA66 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ILE68 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) SER89 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) SER90 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) TRP101 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ASP103 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) TYR114 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) PHE115 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) LYS173 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iawaasaevankprlvfvgdelryaQganqrdveldgfvnyhwltspgglglpkvmlEAginapaevvgpdrsrraliairsspwkaghetnpwhdefdldhghvryfgdhkpstvglpgetkgnrllleaarlhagttreerllapplflfravtvhragravvKghvefcgaaiierlehvvqrdpetgrsfpnlsldlavvsggeidgvdfrwiddrrnaalaagetlrhapeswirwvrqgrlaipgirrrvlasavqsskeqqpasgsaeaatlqtlykfydgrkhafellasrvaaevfresgarykegwlsrssgdggvdfigridmgslkastpvvvlgqakciqptssvspeqvarvvarlrrgwigvyvttgsfsrqaqveiiddqypvvliaggtlaatvrrmvqanyggdldallastvdeygaavthrrpeevisl >4r2a_A:beta-beta-alpha_zinc_fingers; title=EGR1/ZIF268 ZINC FINGERS IN COMPLEX WITH METHYLATED DNA organism=Homo sapiens DNA sequence DG(B2):DC(C11) DC(B3):DG(C10) DG(B4):DC(C9) DT(B5):DA(C8) DG(B6):DC(C7) DG(B7):DC(C6) DG(B8):DC(C5) 5CM(B9):DG(C4) DG(B10):5CM(C3) DT(B11):DA(C2) chainA ( 17) ARG351 0 0 0 0 0 0 0 17 12 4 ( 19) ASP353 0 0 0 0 0 0 0 1 1 2 ( 20) GLU354 0 0 0 0 0 0 2 4 0 0 ( 23) ARG357 0 0 0 0 0 7 11 4 0 0 ( 45) ARG379 0 0 0 0 10 13 3 0 0 0 ( 47) ASP381 0 0 0 0 0 1 8 5 0 0 ( 48) HIS382 0 0 0 28 11 0 0 0 0 0 ( 51) THR385 0 0 0 1 0 0 0 0 0 0 ( 73) ARG407 0 11 12 12 0 0 0 0 0 0 ( 75) ASP409 0 0 1 5 0 0 0 0 0 0 ( 76) GLU410 1 2 0 0 0 0 0 0 0 0 ( 79) ARG413 12 4 0 0 0 0 0 0 0 0 prot.sequence erpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRsDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlr >4r2c_A:beta-beta-alpha_zinc_fingers; title=EGR1/ZIF268 ZINC FINGERS IN COMPLEX WITH HYDROXYMETHYLATED DNA organism=Homo sapiens DNA sequence DA(C2):DT(B11) DG(C4):DG(B10) DC(C5):DG(B8) DC(C6):DG(B7) DC(C7):DG(B6) DA(C8):DT(B5) DC(C9):DG(B4) DG(C10):DC(B3) DC(C11):DG(B2) chainA ( 17) ARG351 4 12 0 0 0 0 0 0 0 ( 19) ASP353 5 1 0 0 0 0 0 0 0 ( 20) GLU354 0 0 3 0 0 0 0 0 0 ( 23) ARG357 0 1 11 7 0 0 0 0 0 ( 45) ARG379 0 0 5 14 14 0 0 0 0 ( 47) ASP381 0 5 6 1 0 0 0 0 0 ( 48) HIS382 0 0 0 0 11 26 0 0 0 ( 51) THR385 0 0 0 0 0 1 0 0 0 ( 73) ARG407 0 0 0 0 0 11 12 14 0 ( 75) ASP409 0 0 0 0 1 4 1 0 0 ( 76) GLU410 0 0 0 0 0 0 0 5 0 ( 79) ARG413 0 0 0 0 0 0 0 5 12 prot.sequence erpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRsDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlr >4r2d_A:beta-beta-alpha_zinc_fingers; title=EGR1/ZIF268 ZINC FINGERS IN COMPLEX WITH FORMYLATED DNA organism=Homo sapiens DNA sequence DA(C2):DT(B11) DG(C4):DG(B10) DC(C5):DG(B8) DC(C6):DG(B7) DC(C7):DG(B6) DA(C8):DT(B5) DC(C9):DG(B4) DG(C10):DC(B3) DC(C11):DG(B2) chainA ( 17) ARG351 4 11 0 0 0 0 0 0 0 ( 19) ASP353 6 1 0 0 0 0 0 0 0 ( 20) GLU354 0 0 3 0 0 0 0 0 0 ( 23) ARG357 0 1 11 7 0 0 0 0 0 ( 45) ARG379 0 0 6 14 12 0 0 0 0 ( 47) ASP381 0 4 6 1 0 0 0 0 0 ( 48) HIS382 0 0 0 0 12 26 0 0 0 ( 51) THR385 0 0 0 0 0 1 0 0 0 ( 73) ARG407 0 0 0 0 0 11 11 12 0 ( 75) ASP409 0 0 0 0 1 4 1 0 0 ( 76) GLU410 0 0 0 0 0 0 0 4 1 ( 79) ARG413 0 0 0 0 0 0 0 5 11 prot.sequence erpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlrq >4r2e_A:beta-beta-alpha_zinc_fingers; title=WILMS TUMOR PROTEIN (WT1) ZINC FINGERS IN COMPLEX WITH METHYLATED DNA organism=Homo sapiens DNA sequence DG(B2):DC(C11) DC(B3):DG(C10) DG(B4):DC(C9) DT(B5):DA(C8) DG(B6):DC(C7) DG(B7):DC(C6) DG(B8):DC(C5) 5CM(B9):DG(C4) DG(B10):5CM(C3) DT(B11):DA(C2) chainA ( 17) ARG366 0 0 0 0 0 0 0 17 12 6 ( 19) ASP368 0 0 0 0 0 0 0 0 1 2 ( 20) GLN369 0 0 0 0 0 0 1 4 0 0 ( 23) ARG372 0 0 0 0 0 5 12 3 0 0 ( 45) ARG394 0 0 0 0 6 11 2 0 0 0 ( 47) ASP396 0 0 0 0 0 2 6 5 0 0 ( 48) HIS397 0 0 0 26 11 0 0 0 0 0 ( 51) THR400 0 0 0 1 0 0 0 0 0 0 ( 75) ARG424 0 13 12 13 0 0 0 0 0 0 ( 76) SER425 0 0 0 0 0 1 0 0 0 0 ( 77) ASP426 0 1 1 9 1 0 0 0 0 0 ( 78) GLU427 1 2 0 0 0 0 0 0 0 0 ( 81) ARG430 11 3 0 0 0 0 0 0 0 0 prot.sequence ekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRSDElvRhhnmhqr >4r2p_A:beta-beta-alpha_zinc_fingers; title=WILMS TUMOR PROTEIN (WT1) ZINC FINGERS IN COMPLEX WITH HYDROXYMETHYLATED DNA organism=Homo sapiens DNA sequence DA(C52):DT(B11) DG(C54):DG(B10) DC(C55):DG(B8) DC(C56):DG(B7) DC(C57):DG(B6) DA(C58):DT(B5) DC(C59):DG(B4) DG(C60):DC(B3) DC(C61):DG(B2) chainA ( 18) ARG366 7 12 0 0 0 0 0 0 0 ( 20) ASP368 5 0 0 0 0 0 0 0 0 ( 21) GLN369 0 0 6 0 0 0 0 0 0 ( 24) ARG372 0 4 10 4 0 0 0 0 0 ( 46) ARG394 0 0 2 12 15 0 0 0 0 ( 47) SER395 0 2 0 0 0 0 0 0 0 ( 48) ASP396 0 7 6 2 0 0 0 0 0 ( 49) HIS397 0 0 0 0 11 27 0 0 0 ( 52) THR400 0 0 0 0 0 1 0 0 0 ( 76) ARG424 0 0 0 0 0 9 12 13 0 ( 77) SER425 0 0 0 1 0 0 0 0 0 ( 78) ASP426 0 0 0 0 1 8 2 0 0 ( 79) GLU427 0 0 0 0 0 0 0 3 1 ( 82) ARG430 0 0 0 0 0 0 0 4 11 prot.sequence sekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRSDElvRhhnmhqr >4r2q_A:beta-beta-alpha_zinc_fingers; title=WILMS TUMOR PROTEIN (WT1) ZINC FINGERS IN COMPLEX WITH FORMYLATED DNA organism=Homo sapiens DNA sequence DA(C2):DT(B11) DG(C4):DG(B10) DC(C5):DG(B8) DC(C6):DG(B7) DC(C7):DG(B6) DA(C8):DT(B5) DC(C9):DG(B4) DG(C10):DC(B3) DC(C11):DG(B2) chainA ( 18) ARG366 4 11 0 0 0 0 0 0 0 ( 20) ASP368 2 0 0 0 0 0 0 0 0 ( 21) GLN369 0 0 1 0 0 0 0 0 0 ( 24) ARG372 0 0 12 4 0 0 0 0 0 ( 46) ARG394 0 0 2 12 6 0 0 0 0 ( 48) ASP396 0 0 6 2 0 0 0 0 0 ( 49) HIS397 0 0 0 0 11 26 0 0 0 ( 52) THR400 0 0 0 0 0 1 0 0 0 ( 76) ARG424 0 0 0 0 0 13 12 12 0 ( 78) ASP426 0 0 0 0 0 13 1 0 0 ( 79) GLU427 0 0 0 0 0 0 0 4 1 ( 82) ARG430 0 0 0 0 0 0 0 4 11 prot.sequence sekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhq >4r2r_A:beta-beta-alpha_zinc_fingers; title=WILMS TUMOR PROTEIN (WT1) ZINC FINGERS IN COMPLEX WITH CARBOXYLATED DNA organism=Homo sapiens DNA sequence DA(C2):DT(B11) DG(C4):DG(B10) DC(C5):DG(B8) DC(C6):DG(B7) DC(C7):DG(B6) DA(C8):DT(B5) DC(C9):DG(B4) DG(C10):DC(B3) DC(C11):DG(B2) chainA ( 18) ARG366 8 11 0 0 0 0 0 0 0 ( 20) ASP368 4 0 0 0 0 0 0 0 0 ( 24) ARG372 0 1 11 11 0 0 0 0 0 ( 46) ARG394 0 0 2 12 6 0 0 0 0 ( 48) ASP396 0 8 6 1 0 0 0 0 0 ( 49) HIS397 0 0 0 1 11 25 0 0 0 ( 52) THR400 0 0 0 0 0 1 0 0 0 ( 76) ARG424 0 0 0 0 0 11 12 12 0 ( 78) ASP426 0 0 0 0 5 8 1 0 0 ( 79) GLU427 0 0 0 0 0 0 0 3 1 ( 82) ARG430 0 0 0 0 0 0 0 4 11 prot.sequence sekpyqcdfkdcerrfsRsDqlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhq >4r2s_A:beta-beta-alpha_zinc_fingers; title=WILMS TUMOR PROTEIN (WT1) Q369P ZINC FINGERS IN COMPLEX WITH METHYLATED DNA organism=Homo sapiens DNA sequence DA(C2):DT(B11) 5CM(C3):DG(B10) DG(C4):5CM(B9) DC(C5):DG(B8) DC(C6):DG(B7) DC(C7):DG(B6) DA(C8):DT(B5) DC(C9):DG(B4) DG(C10):DC(B3) DC(C11):DG(B2) chainA ( 18) ARG366 7 11 15 0 0 0 0 0 0 0 ( 20) ASP368 2 1 0 0 0 0 0 0 0 0 ( 21) PRO369 0 0 2 0 0 0 0 0 0 0 ( 24) ARG372 0 0 2 10 7 0 0 0 0 0 ( 46) ARG394 0 0 0 2 12 11 0 0 0 0 ( 48) ASP396 0 0 0 6 1 0 0 0 0 0 ( 49) HIS397 0 0 0 0 0 11 28 0 0 0 ( 52) THR400 0 0 0 0 0 0 1 0 0 0 ( 76) ARG424 0 0 0 0 0 0 9 14 16 0 ( 78) ASP426 0 0 0 0 0 1 6 0 1 0 ( 79) GLU427 0 0 0 0 0 0 0 0 5 0 ( 82) ARG430 0 0 0 0 0 0 0 0 4 12 prot.sequence sekpyqcdfkdcerrfsRsDplkRhqrrhtgvkpfqcktcqrkfsRsDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhqr >4r4e_B:Putative_DNA-binding_domain; title=STRUCTURE OF GLNR-DNA COMPLEX organism=Bacillus subtilis subsp. subtilis DNA sequence DG(E3):DC(D16) DT(E4):DA(D15) DC(E5):DG(D14) DA(E6):DT(D13) DG(E7):DC(D12) DT(E8):DT(D11) DA(E9):DT(D10) chainB ( 26) ARG26 17 18 0 0 0 0 0 ( 29) ARG29 0 0 0 5 2 0 0 ( 46) ARG46 0 0 0 0 0 9 8 prot.sequence msdnirrsmplfpigivmqltelsaRqiRyyeenglifpartegnRrlfsfhdvdklleikhlieqgvnmagikqilakaeaep >4r55_A: title=THE CRYSTAL STRUCTURE OF A CREN7 MUTANT PROTEIN GR AND DSDNA COMPLEX organism=SULFOLOBUS SOLFATARICUS P2 DNA sequence DG(C109):DC(B108) DT(C110):DA(B107) DG(C111):DC(B106) DA(C112):DT(B105) DT(C113):DA(B104) DC(C114):DG(B103) DA(C115):DT(B102) DC(C116):DG(B101) chainA ( 24) TRP26 0 0 0 5 9 0 0 0 ( 26) LEU28 0 0 0 0 15 24 0 0 ( 29) VAL31 0 0 0 0 0 3 0 0 ( 31) ILE33 0 0 0 0 2 0 0 0 ( 44) ARG46 0 0 8 16 5 0 0 0 prot.sequence sgkkpvkvktpagkeaelvpekvWaLgrVkIglfkdpetgkyfRhklpddypi >4r56_A: title=CRYSTAL STRUCTURE OF SULFOLOBUS CREN7-DSDNA(GTGATCAC) COMPLEX organism=SULFOLOBUS SOLFATARICUS P2 DNA sequence DG(D109):DC(C108) DT(D110):DA(C107) DG(D111):DC(C106) DA(D112):DT(C105) DT(D113):DA(C104) DC(D114):DG(C103) DA(D115):DT(C102) DC(D116):DG(C101) chainA ( 25) TRP26 0 0 0 5 9 0 0 0 ( 27) LEU28 0 0 0 0 16 18 0 0 ( 29) PRO30 0 0 0 0 0 4 3 0 ( 32) ARG33 0 0 0 0 0 0 0 10 ( 35) VAL36 0 0 0 0 0 5 0 0 ( 37) ILE38 0 0 0 0 3 0 0 0 ( 50) ARG51 0 0 9 15 5 0 0 0 prot.sequence ssgkkpvkvktpagkeaelvpekvWaLaPkgRkgVkIglfkdpetgkyfRhklpddypi >4r5p_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) WITH DNA AND A NUCLEOSIDE TRIPHOSPHATE MIMIC ALPHA-CARBOXY NUCLEOSIDE PHOSPHONATE INHIBITOR organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DG(P822):DC(T706) chainA ( 95) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 (116) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (158) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (184) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 (185) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 (259) CYS258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (266) ASN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (284) LEU283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (449) ARG448 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskLlrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >4r5p_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) WITH DNA AND A NUCLEOSIDE TRIPHOSPHATE MIMIC ALPHA-CARBOXY NUCLEOSIDE PHOSPHONATE INHIBITOR organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(E706):DG(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 94) ILE94 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) CYS258 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) LEU283 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsKllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteaVqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >4r63_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF R258A MUTANT OF DNA POLYMERASE BETA organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 39 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 5 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridialipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4r64_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF E295K MUTANT OF DNA POLYMERASE BETA organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 9 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftinkytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4r65_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF R258A MUTANT OF DNA POLYMERASE BETA organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 31 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridialipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4r66_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF E295K MUTANT OF DNA POLYMERASE BETA organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftinkytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4r79_A:"Winged_helix"_DNA-binding_domain; title=MOS1 TRANSPOSASE PAIRED-END COMPLEX WITH LEFT TRANSPOSON END organism=? DNA sequence DG(C4):DC(D53) DG(C5):DC(D52) DT(C6):DA(D51) DG(C7):DC(D50) DT(C8):DA(D49) DA(C9):DT(D48) DC(C10):DG(D47) DA(C11):DT(D46) DA(C12):DT(D45) DG(C13):DC(D44) DT(C14):DA(D43) DA(C15):DT(D42) DG(C16):DC(D41) DG(C17):DC(D40) DG(C18):DC(D39) DA(C19):DT(D38) DA(C20):DT(D37) DT(C21):DA(D36) DG(C22):DC(D35) DT(C23):DA(D34) DC(C24):DG(D33) DG(C25):DC(D32) DG(C26):DC(D31) DT(C27):DA(D30) DT(C28):DA(D29) chainA ( 38) THR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 40) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 10 4 0 0 0 ( 43) GLU47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 ( 44) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 11 2 0 0 0 0 0 ( 61) HIS65 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 1 0 0 0 0 0 0 0 0 0 ( 64) PRO68 0 0 0 0 0 0 0 0 0 0 1 7 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) SER99 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) GLN100 0 0 0 0 11 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) GLN101 0 0 0 0 0 9 14 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) ALA102 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) SER104 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ASN105 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vpnkeqtrtvlifcfhlkktaaeshrmlveafgeqvpTvKtcERwfqrfksgdfdvddkeHgkPpkryedaelqalldeddaqtqkqlaeqlevSQQAvSNrlremgkiqkvgrwvphelnerqmerrkntceillsrykrksflhrivtgdekwiffvnpkrkksyvdpgqpatstarpnrfgkktmlcvwwdqsgviyyellkpgetvnaaryqqqlinlnralqrkrpeyrviflhdnapshtaravrdtletlnwevlphaayspdlapsdyhlfasmghalaeqrfdsyesvkkwldewfaakddefywrgihklperwekcvasdgkyfe >4r89_A: title=CRYSTAL STRUCTURE OF PAFAN1 - 5' FLAP DNA COMPLEX WITH MANGANASE organism=Pseudomonas aeruginosa DNA sequence DA(B-2):DA(D15) DC(B-1):DA(D14) DC(B0):DC(D13) DA(B1):DT(D12) DG(B2):DC(D11) DA(B3):DT(D10) DC(B4):DG(D9) DA(B5):DT(D8) DC(B6):DG(D7) DA(B7):DT(D6) DC(B8):DG(D5) DA(B9):DT(D4) DT(B10):DA(D3) DT(B11):DA(D2) DC(B12):DG(D1) chainA (168) TRP184 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) LEU192 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 (181) ILE197 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (205) TYR221 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) ARG257 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (403) ALA419 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (406) HIS422 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (512) ASP528 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (513) ARG529 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 (515) GLN531 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 prot.sequence pepfyylhnfravlawigeryadllddqerafiaafaelpeasqallvrmvmrkgtlfregklayaeigdtraavqpllalgwvdaqptlelaqlfgllkkdelsqlfrdhlgranlrkdallerlqplfpearrlaewqadfaepvyelrcmalcdrlrlmyfgnlWqdwsefvLadlgIyryesvefsadsrgfrlradvdaYlhlfdcrqrfdlgepleellaglpgepyanpwlegRrvkllfqfaqhcekqrdfdlaqrlyrqsshpgarlrairslergerfaeahalareascapesdaerqglarllprlqgklglprqaraaapeidrldlclafpsepcsvewavrehleepgcavhyvenglinslfgllcweaifaaipgaffhpfhsapAdlHsadfrqrraalfeaclgrledgsyrdaircryrdkfglqspfvywellgeelleqaldclpaahlrawferlledipgnraglpdliqfwpaqrryrmvevkgpgDRlQdnqlrwlqfcrerempvavcyv >4r8a_F: title=CRYSTAL STRUCTURE OF PAFAN1 - 5' FLAP DNA COMPLEX organism=Pseudomonas aeruginosa DNA sequence DA(G-2):DA(I15) DC(G-1):DA(I14) DC(G0):DC(I13) DA(G1):DT(I12) DG(G2):DC(I11) DA(G3):DT(I10) DC(G4):DG(I9) DA(G5):DT(I8) DC(G6):DG(I7) DA(G7):DT(I6) DC(G8):DG(I5) DA(G9):DT(I4) DT(G10):DA(I3) DT(G11):DA(I2) DC(G12):DG(I1) chainF (167) ASN182 2 12 2 0 0 0 0 0 0 0 0 0 0 0 0 (168) LEU183 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (169) TRP184 3 5 4 0 0 0 0 0 0 0 0 0 0 0 0 (170) GLN185 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) LEU192 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 (182) ILE197 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR198 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (206) TYR221 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 (210) PHE225 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 (238) TRP253 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) ARG257 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 (396) PHE411 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) HIS412 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) HIS415 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (401) SER416 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) ALA419 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) ASP528 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 (514) ARG529 0 0 0 0 0 0 0 0 0 1 10 16 0 0 0 (516) GLN531 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 prot.sequence lpepfyylhnfravlawigeryadllddqerafiaafaelpeasqallvrmvmrkgtlfregklayaeigdtraavqpllalgwvdaqptlelaqlfgllkkdelsqlfrdhlgranlrkdallerlqplfpearrlaewqadfaepvyelrcmalcdrlrlmyfgNLWQdwsefvLadlgIYryesvefsadsrgfrlradvdaYlhlFdcrqrfdlgepleellaglpgepyanpWlegRrvkllfqfaqhcekqrdfdlaqrlyrqsshpgarlrairslergerfaeahalareascapesdaerqglarllprlqgklglprqaraaapeidrldlclafpsepcsvewavrehleepgcavhyvenglinslfgllcweaifaaipgafFHpfHSapAdlhsadfrqrraalfeaclgrledgsyrdaircryrdkfglqspfvywellgeelleqaldclpaahlrawferlledipgnraglpdliqfwpaqrryrmvevkgpgDRlQdnqlrwlqfcrerempvavcyv >4r8p_L:UBC-like;RING/U-box; title=CRYSTAL STRUCTURE OF THE RING1B/BMI1/UBCH5C PRC1 UBIQUITYLATION MODULE BOUND TO THE NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DT(J-72):DA(I72) DC(J-71):DG(I71) DG(J-70):DC(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-21):DC(I22) DC(J-20):DC(I21) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DT(J22):DC(I-21) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DC(J70):DG(I-70) chainL (188) ASN281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 prot.sequence ktwelslyelqrtpqeaitdgleivvsprslhselmcpicldmlkntmttkeclhrfcadciitalrsgnkecptcrkklvskrslrpdpnfdaliskiypsgsgsrsalkrinkelsdlardppaqcsagpvgddmfhwqatimgpndspyqggvffltihfptdypfkppkvafttriyhpninsNgsicldilrsqwspaltiskvllsicsllcdpnpddplvpeiariyktdrdkynrisrewtqkyam >4r8u_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=S-SAD STRUCTURE OF DINB-DNA COMPLEX organism=ESCHERICHIA COLI K-12 DNA sequence DG(C21):DC(D54) DG(C22):DC(D53) DG(C23):DC(D52) DT(C24):DA(D51) DC(C25):DG(D50) DC(C26):DG(D49) DT(C27):DA(D48) DA(C28):DT(D47) DG(C29):DC(D46) DG(C30):DC(D45) DA(C31):DT(D44) DC(C32):DG(D43) DC(C33):DG(D42) DC(C34):DG(D41) chainB (241) SER243 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (245) GLU247 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) ARG286 0 0 0 0 0 0 0 3 0 0 0 0 0 0 prot.sequence rkiihvdmdcffaavemrdnpalrdipiaiggsrerrgvistanyparkfgvrsamptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrkSvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtld >4rb1_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MAGNETOSPIRILLUM GRYPHISWALDENSE MSR-1 FUR-MN2+- E. COLI FUR BOX organism=Magnetospirillum gryphiswaldense DNA sequence DC(D603) DG(D604) DC(D605) DG(D606) DA(D607) DT(D608) DA(D609) DA(D610) DT(D611) DG(D612) DA(D613) DT(D614) DA(D615) DA(D616) DT(D617) DC(D618) DA(D619) DT(D620) DT(D621) DA(D622) DT(D623) DC(D624) DC(D625) DG(D626) chainA ( 14) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 52) ALA53 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 55) TYR56 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 prot.sequence vsrieqrlidkglKvtdqrrviaqvlsdsadhpdveevyrratakdprisiAtvYRtvrlfeeesilerhdfgdgraryeeapsehhdhlidvnsarvieftspeiealqreiarkhgfrlvghrlelygvp >4rb1_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MAGNETOSPIRILLUM GRYPHISWALDENSE MSR-1 FUR-MN2+- E. COLI FUR BOX organism=Magnetospirillum gryphiswaldense DNA sequence DC(D603) DG(D604) DC(D605) DG(D606) DA(D607) DT(D608) DA(D609) DA(D610) DT(D611) DG(D612) DA(D613) DT(D614) DA(D615) DA(D616) DT(D617) DC(D618) DA(D619) DT(D620) DT(D621) DA(D622) DT(D623) DC(D624) DC(D625) DG(D626) chainA ( 14) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 52) ALA53 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 55) TYR56 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 chainB ( 51) SER51 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ILE52 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA53 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG57 0 0 3 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vsrieqrlidkglKvtdqrrviaqvlsdsadhpdveevyrratakdprisiAtvYRtvrlfeeesilerhdfgdgraryeeapsehhdhlidvnsarvieftspeiealqreiarkhgfrlvghrlelygvp/hmvsrieqrlidkglkvtdqrrviaqvlsdsadhpdveevyrratakdpiSIAtvyRtvrlfeeesilerhdfgdgraryeeapsehhdhlidvnarvieftspeiealqreiarkhgfrlvghrlelygvp >4rb2_CD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MAGNETOSPIRILLUM GRYPHISWALDENSE MSR-1 SEMET-FUR- MN2+-FEOAB1 OPERATOR organism=Magnetospirillum gryphiswaldense DNA sequence DT(A1):DA(B25) DT(A2):DA(B24) DA(A3):DT(B23) DA(A4):DT(B22) DT(A5):DA(B21) DT(A6):DA(B20) DG(A7):DC(B19) DC(A8):DG(B18) DA(A9):DT(B17) DA(A10):DT(B16) DA(A11):DT(B15) DT(A12):DA(B14) DC(A13):DG(B13) DA(A14):DT(B12) DT(A15):DA(B11) DT(A16):DA(B10) DT(A17):DA(B9) DG(A18):DC(B8) DC(A19):DG(B7) DA(A20):DT(B6) DA(A21):DT(B5) DT(A22):DA(B4) DT(A23):DA(B3) DG(A24):DC(B2) DC(A25):DG(B1) chainC ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 54) THR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 56) TYR56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 ( 57) ARG57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 6 8 2 0 0 0 0 0 chainD ( 15) LYS15 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) SER51 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) TYR56 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG57 0 0 0 0 0 10 8 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mvsrieqrcidkgmkmtdqrrviaqvlsdsadhpdveevyrratakdprisiATvYRtvrlfeeesilerhdfgdraryeeapsehhdhlidvnsarvieftspeiealqreiarkhgfrlvghrlelygvplt/mvsrieqrcidkgmKmtdqrrviaqvlsdsadhpdveevyrratakdpriSiAtvYRtvrlfeeesilerhdfgdgraryeeapsehhdhlidvnsarvieftspeiealqreiarkhgfrlvghrlelygvpl >4rb2_D:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MAGNETOSPIRILLUM GRYPHISWALDENSE MSR-1 SEMET-FUR- MN2+-FEOAB1 OPERATOR organism=Magnetospirillum gryphiswaldense DNA sequence DG(B1):DC(A25) DC(B2):DG(A24) DA(B3):DT(A23) DA(B4):DT(A22) DT(B5):DA(A21) DT(B6):DA(A20) DG(B7):DC(A19) DC(B8):DG(A18) DA(B9):DT(A17) DA(B10):DT(A16) DA(B11):DT(A15) DT(B12):DA(A14) DG(B13):DC(A13) DA(B14):DT(A12) DT(B15):DA(A11) DT(B16):DA(A10) DT(B17):DA(A9) DG(B18):DC(A8) DC(B19):DG(A7) DA(B20):DT(A6) DA(B21):DT(A5) DT(B22):DA(A4) DT(B23):DA(A3) DA(B24):DT(A2) DA(B25):DT(A1) chainD ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 ( 51) SER51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 56) TYR56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 ( 57) ARG57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 8 10 0 0 0 0 0 prot.sequence mvsrieqrcidkgmKmtdqrrviaqvlsdsadhpdveevyrratakdpriSiAtvYRtvrlfeeesilerhdfgdgraryeeapsehhdhlidvnsarvieftspeiealqreiarkhgfrlvghrlelygvpl >4rb3_CD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MAGNETOSPIRILLUM GRYPHISWALDENSE MSR-1 FUR-MN2+- FEOAB1 OPERATOR organism=Magnetospirillum gryphiswaldense DNA sequence DT(A1):DA(B25) DT(A2):DA(B24) DA(A3):DT(B23) DA(A4):DT(B22) DT(A5):DA(B21) DT(A6):DA(B20) DG(A7):DC(B19) DC(A8):DG(B18) DA(A9):DT(B17) DA(A10):DT(B16) DA(A11):DT(B15) DT(A12):DA(B14) DC(A13):DG(B13) DA(A14):DT(B12) DT(A15):DA(B11) DT(A16):DA(B10) DT(A17):DA(B9) DG(A18):DC(B8) DC(A19):DG(B7) DA(A20):DT(B6) DA(A21):DT(B5) DT(A22):DA(B4) DT(A23):DA(B3) DG(A24):DC(B2) DC(A25):DG(B1) chainC ( 53) ALA53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 ( 56) TYR56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 ( 57) ARG57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 8 8 0 0 0 0 0 chainD ( 14) LYS15 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER51 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA53 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) TYR56 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG57 0 0 0 0 0 12 9 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mvsrieqrlidkglkvtdqrrviaqvlsdsadhpdveevyrratakdprisiAtvYRtvrlfeeesilerhdfgdgraryeeapsehhdhlidvnsarvieftspeiealqreiarkhgfrlvghrlelygvplts/vsrieqrlidkglKvtdqrrviaqvlsdsadhpdveevyrratakdpriSiAtvYRtvrlfeeesilerhdfgdgraryeeapsehhdhlidvnsarvieftspeiealqreiarkhgfrlvghrlelygvpl >4rb3_D:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MAGNETOSPIRILLUM GRYPHISWALDENSE MSR-1 FUR-MN2+- FEOAB1 OPERATOR organism=Magnetospirillum gryphiswaldense DNA sequence DT(A1):DA(B25) DT(A2):DA(B24) DA(A3):DT(B23) DA(A4):DT(B22) DT(A5):DA(B21) DT(A6):DA(B20) DG(A7):DC(B19) DC(A8):DG(B18) DA(A9):DT(B17) DA(A10):DT(B16) DA(A11):DT(B15) DT(A12):DA(B14) DC(A13):DG(B13) DA(A14):DT(B12) DT(A15):DA(B11) DT(A16):DA(B10) DT(A17):DA(B9) DG(A18):DC(B8) DC(A19):DG(B7) DA(A20):DT(B6) DA(A21):DT(B5) DT(A22):DA(B4) DT(A23):DA(B3) DG(A24):DC(B2) DC(A25):DG(B1) chainD ( 14) LYS15 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER51 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA53 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) TYR56 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG57 0 0 0 0 0 12 9 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vsrieqrlidkglKvtdqrrviaqvlsdsadhpdveevyrratakdpriSiAtvYRtvrlfeeesilerhdfgdgraryeeapsehhdhlidvnsarvieftspeiealqreiarkhgfrlvghrlelygvpl >4rbo_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF A NANOG HOMEOBOX (NANOG) FROM HOMO SAPIENS AT 3.30 A RESOLUTION organism=? DNA sequence DC(C1):DG(B12) DT(C2):DA(B11) DT(C3):DA(B10) DG(C4):DC(B9) DA(C5):DT(B8) DA(C6):DT(B7) DT(C7):DA(B6) DG(C8):DC(B5) DG(C9):DC(B4) DG(C10):DC(B3) DC(C11):DG(B2) DC(C12):DG(B1) chainA ( 41) LYS140 0 0 0 0 0 0 0 0 0 0 1 0 ( 42) THR141 0 0 0 0 0 2 1 0 0 0 0 0 ( 45) GLN144 0 0 0 0 0 0 0 0 5 1 0 0 ( 46) ASN145 0 0 0 0 6 8 0 0 0 0 0 0 ( 49) MET148 0 0 0 0 0 0 0 4 0 0 0 0 prot.sequence tvfsstqlcvlndrfqrqkylslqqmqelsnilnlsykqvKTwfQNqrMkskrwq >4rd5_A: title=CRYSTAL STRUCTURE OF R.NGOAVII RESTRICTION ENDONUCLEASE B3 DOMAIN WITH COGNATE DNA organism=Neisseria gonorrhoeae DNA sequence DG(D18):DC(C16) DG(D19):DC(C15) DA(D20):DT(C14) DT(D21):DA(C13) DT(D22):DA(C12) DG(D23):DC(C11) DC(D24):DG(C10) DC(D25):DG(C9) DG(D26):DC(C8) DC(D27):DG(C7) DT(D28):DA(C6) DT(D29):DA(C5) DA(D30):DT(C4) DG(D31):DC(C3) chainA ( 33) SER217 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 43) ARG227 0 0 0 0 0 0 0 0 11 13 7 0 0 0 ( 53) ARG237 0 0 0 0 0 0 0 5 13 0 0 0 0 0 ( 57) GLU241 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 59) GLU243 0 0 0 0 0 0 10 0 0 0 0 0 0 0 ( 61) ILE245 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 93) SER277 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 95) ASP279 0 0 0 0 5 7 11 0 0 0 0 0 0 0 ( 96) TYR280 0 0 0 7 7 0 0 0 0 0 0 0 0 0 ( 98) LYS282 0 0 0 0 8 10 7 0 0 0 0 0 0 0 ( 99) ASN283 0 0 0 0 0 0 9 5 0 0 0 0 0 0 (101) ARG285 0 0 0 0 0 0 1 13 22 0 0 0 0 0 (106) LEU290 0 0 0 0 0 0 0 0 6 3 0 0 0 0 prot.sequence lgvqkiapeqirqlfaqtseyhfsipakteekSnlnvffgegRrdkrgfvkpRpwyEvElIvskditsqegypvlksftvitddgwqfqcktSgDYsKNfRsendLktlgkwikgrleshgclqnnekithetlreygndhfelrstdnpdvwllsfkgk >4rdm_B: title=CRYSTAL STRUCTURE OF R.NGOAVII RESTRICTION ENDONUCLEASE B3 DOMAIN WITH COGNATE DNA organism=Neisseria gonorrhoeae DNA sequence DC(E3):DG(F31) DT(E4):DA(F30) DA(E5):DT(F29) DA(E6):DC(F28) DG(E7):DC(F27) DC(E8):DG(F26) DG(E9):DC(F25) DG(E10):DC(F24) DC(E11):DG(F23) DA(E12):DT(F22) DA(E13):DT(F21) DT(E14):DA(F20) DC(E15):DG(F19) DC(E16):DG(F18) chainB ( 37) SER217 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 47) ARG227 0 0 0 8 15 8 0 0 0 0 0 0 0 0 ( 57) ARG237 0 0 0 0 0 14 9 0 0 0 0 0 0 0 ( 61) GLU241 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 63) GLU243 0 0 0 0 0 0 1 9 0 0 0 0 0 0 ( 65) ILE245 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 97) SER277 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 99) ASP279 0 0 0 0 0 0 0 13 5 5 0 0 0 0 (100) TYR280 0 0 0 0 0 0 0 0 0 7 2 0 0 0 (102) LYS282 0 0 0 0 0 0 0 8 10 8 0 0 0 0 (103) ASN283 0 0 0 0 0 0 4 9 0 0 0 0 0 0 (105) ARG285 0 0 0 0 0 20 13 2 0 0 0 0 0 0 (110) LEU290 0 0 0 0 3 6 0 0 0 0 0 0 0 0 prot.sequence lenclgvqkiapeqirqlfaqtseyhfsipakteekSnlnvffgegRrdkrgfvkpRpwyEvElIvskditsqegypvlksftvitddgwqfqcktSgDYsKNfRsendLktlgkwikgrleshgclqnnekithetlreygndhfelrstdnpdvwllsfkgk >4rdu_D:Homeodomain-like; title=CRYSTAL STRUCTURE OF A DISTAL-LESS HOMEOBOX PROTEIN 5 (DLX5) FROM HOMO SAPIENS AT 1.85 A RESOLUTION organism=? DNA sequence DG(E2):DC(F13) DA(E3):DT(F12) DC(E4):DG(F11) DT(E5):DA(F10) DA(E6):DT(F9) DA(E7):DT(F8) DT(E8):DA(F7) DT(E9):DA(F6) DA(E10):DT(F5) DG(E11):DC(F4) DT(E12):DA(F3) DC(E13):DG(F2) DG(E14):DC(F1) chainD ( 2) ARG138 0 0 0 0 0 0 3 4 0 0 0 0 0 ( 5) ARG141 0 0 0 0 0 0 0 7 8 17 0 0 0 ( 47) ILE183 0 0 0 0 0 3 2 0 0 0 0 0 0 ( 50) GLN186 0 0 0 4 0 1 0 0 0 0 0 0 0 ( 51) ASN187 0 0 0 0 0 0 10 7 0 0 0 0 0 prot.sequence vRkpRtiyssfqlaalqrrfqktqylalperaelaaslgltqtqvkIwfQNkrskikkimkn >4rec_A: title=A NUCLEASE-DNA COMPLEX FORM 3 organism=Homo sapiens DNA sequence DC(B101):DG(B332) DG(B102):DC(B331) DT(B103):DA(B330) DG(B104):DC(B329) DG(B105):DC(B328) DC(B106):DG(B327) DG(B107):DC(B326) DA(B108):DT(B325) DG(B109):DC(B324) DC(B110):DG(B323) DC(B11):DG(B322) DG(B12):DC(B321) DT(B13):DA(B320) DT(B14):DA(B319) DG(B15):DC(B318) DC(B16):DG(B317) DT(B17):DA(B316) DA(B18):DT(B315) DC(B19):DG(B314) DG(B20):DC(B313) chainA ( 4) TYR374 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) VAL577 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efpYylrsflvvlktvleneddmllfdeqekgivtkfyqlsatgqklyvrlfqrklswikmtkleyeeialdltpvieeltnagflqteselqelsevlellsapelkslaktfhlvnpngqkqqlvdaflklakqkpgigavilkrakalagqsvrickgpravfsrilllfsltdsmedegllVnlgrmefpsytinrkthifqdrddliryaaathmlsdissamangnweeakelaqcakrdwnrlknhpslrchedlplflrcftvgwiytrilsrfveilqrlhmyeeavrelesllsqriycpdsrgrwwdrlalnlhqhlkrleptikcitegladpevrtghrlslyqravrlrespsckkfkhlfqqlpemavqdvkhvtitgrlcsveelalahyrrsgfdqgihgegstfstlyglllwdiifmdgipdvfrnacqafpldlctdsfftsrrpalearlqlihdapeeslrawvaatwheqegrvaslvswdrftslqqaqdlvsclggpvlsgvcrhlaadfrhcrgglpalvvwnsqsrhfklvevkgpndrlshkqmiwlaelqklgaevevchvvav >4ri8_A: title=FAN1 NUCLEASE BOUND TO 5' PHOSPHORYLATED P(DG)/3'(DT-DT-DT-DT) DOUBLE FLAP DNA organism=Homo sapiens DNA sequence DA(F1):DT(G9) DG(F2):DC(G8) DG(F3):DC(G7) DC(F4):DG(G6) DG(F5):DC(G5) DT(F6):DA(G4) DG(F7):DC(G3) chainA (586) ASN980 0 0 0 0 5 3 0 (588) ARG982 0 0 0 0 0 0 2 prot.sequence tghpyylrsflvvlktvleneddmllfdeqekgivtkfyqlsatgqklyvrlfqrklswikmtkleyeeialdltpvieeltnagflqteselqelsevlellsapelkslaktfhlanpngqkqqlvdaflklakqrsvigavilkrakalagqsvrickgpravfsrilllfsltdsmededaacggqgqlstvllvnlgrmefpsytinrkthifqdrddliryaaathmlsdissamangnweeakelaqcakrdwnrlknhpslrchedlplflrcftvgwiytrilsrfveilqrlhmyeeavrelesllsqriycpdsrgrwwdrlalnlhqhlkrleptikcitegladpevrtghrlslyqravrlrespsckkfkhlfqqlpemavqdvkhvtitgrlcksvfvmvlcsveelalahyrrsgfdqgihgegstfstlyglllwdiifmdgipdvfrnacqafpldlctdsfftsrrpalearlqlihdapeeslrawvaatwheqegrvaslvswdrftslqqaqdlvsclggpvlsgvcrhlaadfrhcrgglpdlvvwnsqsrhfklvevkgpNdRlshkqmiwlaelqklgaevevchvvav >4ri9_B: title=FAN1 NUCLEASE BOUND TO 5' PHOSPHORYLATED P(DT)/3'(DT-DT-DT-DT-DT-DT- DT-DT) DOUBLE FLAP DNA organism=Homo sapiens DNA sequence DA(W1):DT(V3) DG(W2):DC(V2) DC(W3):DG(V1) DC(W4):DG(T14) DA(W5):DT(T13) DC(W6):DG(T12) DG(W7):DC(T11) DC(W8):DG(T10) DC(W9):DG(T9) DT(W10):DA(T8) chainB (586) ASN980 0 0 0 0 0 2 0 0 0 0 (588) ARG982 0 0 0 0 0 0 0 1 0 0 prot.sequence tghpyylrsflvvlktvleneddmllfdeqekgivtkfyqlsatgqklyvrlfqrklswikmtkleyeeialdltpvieeltnagflqteselqelsevlellsapelkslaktfhlanpngqkqqlvdaflklakqrsvigavilkrakalagqsvrickgpravfsrilllfsltdsmededaacggqgqlstvllvnlgrmefpsytinrkthifqdrddliryaaathmlsdissamangnweeakelaqcakrdwnrlknhpslrchedlplflrcftvgwiytrilsrfveilqrlhmyeeavrelesllsqriycpdsrgrwwdrlalnlhqhlkrleptikcitegladpevrtghrlslyqravrlrespsckkfkhlfqqlpemavqdvkhvtitgrlcksvfvmvlcsveelalahyrrsgfdqgihgegstfstlyglllwdiifmdgipdvfrnacqafpldlctdsfftsrrpalearlqlihdapeeslrawvaatwheqegrvaslvswdrftslqqaqdlvsclggpvlsgvcrhlaadfrhcrgglpdlvvwnsqsrhfklvevkgpNdRlshkqmiwlaelqklgaevevchvvav >4ria_A: title=FAN1 NUCLEASE BOUND TO 5' PHOSPHORYLATED NICKED DNA organism=Homo sapiens DNA sequence DA(G8):DT(F10) DG(G9):DC(F9) DG(G10):DC(F8) DC(G11):DG(F7) DG(G12):DC(F6) DT(G13):DA(F5) DG(G14):DC(F4) DG(E1):DC(F3) DC(E2):DG(F2) DT(E3):DA(F1) chainA (584) ASN980 0 0 0 0 1 7 0 0 0 0 (586) ARG982 0 0 0 13 6 0 0 0 0 0 prot.sequence tghpyylrsflvvlktvleneddmllfdeqekgivtkfyqlsatgqklyvrlfqrklswikmtkleyeeialdltpvieeltnagflqteselqelsevlellsapelkslaktfhlanpngqkqqlvdaflklakqrsvigavilkrakalagqsvrickgpravfsrilllfsltdsmededaacggqgqlstvllvnlgrmefpsytinrkthifqdrddliryaaathmlsdissamangnweeakelaqcakrdwnrlknhpslrchedlplflrcftvgwiytrilsrfveilqrlhmyeeavrelesllsqriycpdsrgrwwdrlalnlhqhlkrleptikcitegladpevrtghrlslyqravrlrespsckkfkhlfqqlpemavqdvkhvtitgrlcvfvmvlcsveelalahyrrsgfdqgihgegstfstlyglllwdiifmdgipdvfrnacqafpldlctdsfftsrrpalearlqlihdapeeslrawvaatwheqegrvaslvswdrftslqqaqdlvsclggpvlsgvcrhlaadfrhcrgglpdlvvwnsqsrhfklvevkgpNdRlshkqmiwlaelqklgaevevchvvav >4rib_A: title=FAN1 NUCLEASE BOUND TO 5' PHOSPHORYLATED P(DT) SINGLE FLAP DNA organism=Homo sapiens DNA sequence DG(V4):DC(U19) DA(V5):DT(U18) DG(V6):DC(U17) DG(V7):DC(U16) DA(V8):DT(U15) DG(V9):DC(U14) DT(V10):DA(U13) DC(V11):DG(U12) DT(V12):DA(U11) DA(W1):DT(U10) DG(W2):DC(U9) DG(W3):DC(U8) DC(W4):DG(U7) DG(W5):DC(U6) DT(W6):DA(U5) DG(W7):DC(U4) DG(Y1):DC(U3) DC(Y2):DG(U2) DT(Y3):DA(U1) chainA (183) GLU561 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (586) ASN980 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 prot.sequence tghpyylrsflvvlktvleneddmllfdeqekgivtkfyqlsatgqklyvrlfqrklswikmtkleyeeialdltpvieeltnagflqteselqelsevlellsapelkslaktfhlanpngqkqqlvdaflklakqrsvigavilkrakalagqsvrickgpravfsrilllfsltdsmedEdaacggqgqlstvllvnlgrmefpsytinrkthifqdrddliryaaathmlsdissamangnweeakelaqcakrdwnrlknhpslrchedlplflrcftvgwiytrilsrfveilqrlhmyeeavrelesllsqriycpdsrgrwwdrlalnlhqhlkrleptikcitegladpevrtghrlslyqravrlrespsckkfkhlfqqlpemavqdvkhvtitgrlcksvfvmvlcsveelalahyrrsgfdqgihgegstfstlyglllwdiifmdgipdvfrnacqafpldlctdsfftsrrpalearlqlihdapeeslrawvaatwheqegrvaslvswdrftslqqaqdlvsclggpvlsgvcrhlaadfrhcrgglpdlvvwnsqsrhfklvevkgpNdrlshkqmiwlaelqklgaevevchvvav >4rib_AB: title=FAN1 NUCLEASE BOUND TO 5' PHOSPHORYLATED P(DT) SINGLE FLAP DNA organism=Homo sapiens DNA sequence DG(V4):DC(U19) DA(V5):DT(U18) DG(V6):DC(U17) DG(V7):DC(U16) DA(V8):DT(U15) DG(V9):DC(U14) DT(V10):DA(U13) DC(V11):DG(U12) DT(V12):DA(U11) DA(W1):DT(U10) DG(W2):DC(U9) DG(W3):DC(U8) DC(W4):DG(U7) DG(W5):DC(U6) DT(W6):DA(U5) DG(W7):DC(U4) DG(Y1):DC(U3) DC(Y2):DG(U2) DT(Y3):DA(U1) chainA (183) GLU561 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (586) ASN980 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 chainB ( 5) TYR374 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR573 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) VAL577 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tghpyylrsflvvlktvleneddmllfdeqekgivtkfyqlsatgqklyvrlfqrklswikmtkleyeeialdltpvieeltnagflqteselqelsevlellsapelkslaktfhlanpngqkqqlvdaflklakqrsvigavilkrakalagqsvrickgpravfsrilllfsltdsmedEdaacggqgqlstvllvnlgrmefpsytinrkthifqdrddliryaaathmlsdissamangnweeakelaqcakrdwnrlknhpslrchedlplflrcftvgwiytrilsrfveilqrlhmyeeavrelesllsqriycpdsrgrwwdrlalnlhqhlkrleptikcitegladpevrtghrlslyqravrlrespsckkfkhlfqqlpemavqdvkhvtitgrlcksvfvmvlcsveelalahyrrsgfdqgihgegstfstlyglllwdiifmdgipdvfrnacqafpldlctdsfftsrrpalearlqlihdapeeslrawvaatwheqegrvaslvswdrftslqqaqdlvsclggpvlsgvcrhlaadfrhcrgglpdlvvwnsqsrhfklvevkgpNdrlshkqmiwlaelqklgaevevchvvav/tghpYylrsflvvlktvleneddmllfdeqekgivtkfyqlsatgqklyvrlfqrklswikmtkleyeeialdltpvieeltnagflqteselqelsevlellsapelkslaktfhlanpngqkqqlvdaflklakqrsvigavilkrakalagqsvrickgpravfsrilllfsltdsmededaacggqgqlsTvllVnlgrmefpsytinrkthifqdrddliryaaathmlsdissamangnweeakelaqcakrdwnrlknhpslrchedlplflrcftvgwiytrilsrfveilqrlhmyeeavrelesllsqriycpdsrgrwwdrlalnlhqhlkrleptikcitegladpevrtghrlslyqravrlrespsckkfkhlfqqlpemavqdvkhvtitgrlcpqrksvfvmeageaadpttvlcsveelalahyrrsgfdqgihgegstfstlyglllwdiifmdgipdvfrnacqafpldlctdsfftsrrpalearlqlihdapeeslrawvaatwheqegrvaslvswdrftslqqaqdlvsclggpvlsgvcrhlaadfrhcrgglpdlvvwnsqsrhfklvevkgpndrlshkqmiwlaelqklgaevevchvvav >4ric_A: title=FAN1 NUCLEASE BOUND TO 5' HYDROXYL (DT-DT) SINGLE FLAP DNA organism=Homo sapiens DNA sequence DA(U1):DT(Y3) DG(U2):DC(Y2) DC(U3):DG(Y1) DC(U4):DG(T14) DA(U5):DT(T13) DC(U6):DG(T12) DG(U7):DC(T11) DC(U8):DG(T10) DC(U9):DG(T9) DT(U10):DA(T8) DA(U11):DT(V12) DG(U12):DC(V11) DA(U13):DT(V10) DC(U14):DG(V9) DT(U15):DA(V8) DC(U16):DG(V7) DC(U17):DG(V6) DT(U18):DA(V5) DC(U19):DG(V4) chainA (586) ASN980 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tghpyylrsflvvlktvleneddmllfdeqekgivtkfyqlsatgqklyvrlfqrklswikmtkleyeeialdltpvieeltnagflqteselqelsevlellsapelkslaktfhlvnpngqkqqlvdaflklakqrsvigavilkrakalagqsvrickgpravfsrilllfsltdsmededaacggqgqlstvllvnlgrmefpsytinrkthifqdrddliryaaathmlsdissamangnweeakelaqcakrdwnrlknhpslrchedlplflrcftvgwiytrilsrfveilqrlhmyeeavrelesllsqriycpdsrgrwwdrlalnlhqhlkrleptikcitegladpevrtghrlslyqravrlrespsckkfkhlfqqlpemavqdvkhvtitgrlcksvfvmvlcsveelalahyrrsgfdqgihgegstfstlyglllwdiifmdgipdvfrnacqafpldlctdsfftsrrpalearlqlihdapeeslrawvaatwheqegrvaslvswdrftslqqaqdlvsclggpvlsgvcrhlaadfrhcrgglpdlvvwnsqsrhfklvevkgpNdrlshkqmiwlaelqklgaevevchvvav >4ric_AB: title=FAN1 NUCLEASE BOUND TO 5' HYDROXYL (DT-DT) SINGLE FLAP DNA organism=Homo sapiens DNA sequence DG(V4):DC(U19) DA(V5):DT(U18) DG(V6):DC(U17) DG(V7):DC(U16) DA(V8):DT(U15) DG(V9):DC(U14) DT(V10):DA(U13) DC(V11):DG(U12) DT(V12):DA(U11) DA(T8):DT(U10) DG(T9):DC(U9) DG(T10):DC(U8) DC(T11):DG(U7) DG(T12):DC(U6) DT(T13):DA(U5) DG(T14):DC(U4) DG(Y1):DC(U3) DC(Y2):DG(U2) DT(Y3):DA(U1) chainA (586) ASN980 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB ( 5) TYR374 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR573 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) VAL577 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tghpyylrsflvvlktvleneddmllfdeqekgivtkfyqlsatgqklyvrlfqrklswikmtkleyeeialdltpvieeltnagflqteselqelsevlellsapelkslaktfhlvnpngqkqqlvdaflklakqrsvigavilkrakalagqsvrickgpravfsrilllfsltdsmededaacggqgqlstvllvnlgrmefpsytinrkthifqdrddliryaaathmlsdissamangnweeakelaqcakrdwnrlknhpslrchedlplflrcftvgwiytrilsrfveilqrlhmyeeavrelesllsqriycpdsrgrwwdrlalnlhqhlkrleptikcitegladpevrtghrlslyqravrlrespsckkfkhlfqqlpemavqdvkhvtitgrlcksvfvmvlcsveelalahyrrsgfdqgihgegstfstlyglllwdiifmdgipdvfrnacqafpldlctdsfftsrrpalearlqlihdapeeslrawvaatwheqegrvaslvswdrftslqqaqdlvsclggpvlsgvcrhlaadfrhcrgglpdlvvwnsqsrhfklvevkgpNdrlshkqmiwlaelqklgaevevchvvav/tghpYylrsflvvlktvleneddmllfdeqekgivtkfyqlsatgqklyvrlfqrklswikmtkleyeeialdltpvieeltnagflqteselqelsevlellsapelkslaktfhlvnpngqkqqlvdaflklakqrsvigavilkrakalagqsvrickgpravfsrilllfsltdsmededaacggqgqlsTvllVnlgrmefpsytinrkthifqdrddliryaaathmlsdissamangnweeakelaqcakrdwnrlknhpslrchedlplflrcftvgwiytrilsrfveilqrlhmyeeavrelesllsqriycpdsrgrwwdrlalnlhqhlkrleptikcitegladpevrtghrlslyqravrlrespsckkfkhlfqqlpemavqdvkhvtitgrlcpqrksvfvmeageaadpttvlcsveelalahyrrsgfdqgihgegstfstlyglllwdiifmdgipdvfrnacqafpldlctdsfftsrrpalearlqlihdapeeslrawvaatwheqegrvaslvswdrftslqqaqdlvsclggpvlsgvcrhlaadfrhcrgglpdlvvwnsqsrhfklvevkgpndrlshkqmiwlaelqklgaevevchvvav >4rkg_AB: title=STRUCTURE OF THE MSL2 CXC DOMAIN BOUND WITH A NON-SPECIFIC (GC)6 DNA organism=Drosophila melanogaster DNA sequence DG(H1):DC(I12) DC(H2):DG(I11) DG(H3):DC(I10) DC(H4):DG(I9) DG(H5):DC(I8) DC(H6):DG(I7) DG(H7):DC(I6) DC(H8):DG(I5) DG(H9):DC(I4) DC(H10):DG(I3) DG(H11):DC(I2) DC(H12):DG(I1) chainA ( 4) ARG526 0 0 0 0 5 10 9 0 0 0 0 0 ( 14) ARG543 0 0 0 0 0 0 0 2 5 3 0 0 chainB ( 5) ARG526 6 12 9 0 0 0 0 0 0 0 0 0 ( 22) ARG543 0 0 0 0 0 9 7 0 0 0 0 0 prot.sequence pkcRcgittcrnsRcpcyksynscagchcvgcknphk/kpkcRcgisgssntlttcrnsRcpcyksynscagchcvgcknphke >4rkg_B: title=STRUCTURE OF THE MSL2 CXC DOMAIN BOUND WITH A NON-SPECIFIC (GC)6 DNA organism=Drosophila melanogaster DNA sequence DG(H1):DC(I12) DC(H2):DG(I11) DG(H3):DC(I10) DC(H4):DG(I9) DG(H5):DC(I8) DC(H6):DG(I7) DG(H7):DC(I6) DC(H8):DG(I5) DG(H9):DC(I4) DC(H10):DG(I3) DG(H11):DC(I2) DC(H12):DG(I1) chainB ( 5) ARG526 6 12 9 0 0 0 0 0 0 0 0 0 ( 22) ARG543 0 0 0 0 0 9 7 0 0 0 0 0 prot.sequence kpkcRcgisgssntlttcrnsRcpcyksynscagchcvgcknphke >4rkh_CDEF: title=STRUCTURE OF THE MSL2 CXC DOMAIN BOUND WITH A SPECIFIC MRE SEQUENCE organism=Drosophila melanogaster DNA sequence DA(B2):DT(A15) DT(B3):DA(A14) DC(B4):DG(A13) DC(B5):DG(A12) DA(B6):DT(A11) DT(B7):DA(A10) DC(B8):DG(A9) DT(B9):DA(A8) DC(B10):DG(A7) DG(B11):DC(A6) DC(B12):DG(A5) DT(B13):DA(A4) DC(B14):DG(A3) DA(B15):DT(A2) DT(B16):DA(A1) chainC ( 5) ARG526 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 ( 9) SER532 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 20) ARG543 0 0 0 0 0 0 1 5 7 3 0 0 0 0 0 chainD ( 8) ARG526 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG543 0 0 6 12 4 0 0 0 0 0 0 0 0 0 0 chainE ( 8) ARG526 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG543 0 0 0 0 0 0 0 3 9 7 0 0 0 0 0 chainF ( 5) ARG526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 8) ILE529 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 9) SER530 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 ( 20) ARG543 0 0 0 0 0 0 0 0 0 0 0 4 8 4 0 prot.sequence kpkcRcgiSsntlttcrnsRcpcyksynscagchcvgcknphkedyv/sppkpkcRcgisssntlttcrnsRcpcyksynscagchcvgcknphkedyv/sppkpkcRcgisgssntlttcrnsRcpcyksynscagchcvgcknphkedy/kpkcRcgISsntlttcrnsRcpcyksynscagchcvgcknphkedy >4rkh_F: title=STRUCTURE OF THE MSL2 CXC DOMAIN BOUND WITH A SPECIFIC MRE SEQUENCE organism=Drosophila melanogaster DNA sequence DA(A1):DT(B16) DT(A2):DA(B15) DG(A3):DC(B14) DA(A4):DT(B13) DG(A5):DC(B12) DC(A6):DG(B11) DG(A7):DC(B10) DA(A8):DT(B9) DG(A9):DC(B8) DA(A10):DT(B7) DT(A11):DA(B6) DG(A12):DC(B5) DG(A13):DC(B4) DA(A14):DT(B3) DT(A15):DA(B2) chainF ( 5) ARG526 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ILE529 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) SER530 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG543 0 4 8 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpkcRcgISsntlttcrnsRcpcyksynscagchcvgcknphkedy >4rnm_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN POLYMERASE ETA INSERTING DAMPNPP OPPOSITE DNA TEMPLATE CONTAINING AN ABASIC SITE organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 4 1 (376) LEU378 0 0 0 0 0 2 3 0 (380) ARG382 0 0 14 10 0 0 0 0 (419) MET421 0 0 0 0 0 0 1 0 (421) PHE423 0 0 0 0 0 0 2 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltMlFlcatkfsas >4rnn_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN POLYMERASE ETA INSERTING DGMPNPP OPPOSITE DNA TEMPLATE CONTAINING AN ABASIC SITE organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA ( 64) ARG61 0 0 0 0 0 0 0 9 (320) SER322 0 0 0 0 0 0 3 1 (376) LEU378 0 0 0 0 1 2 6 0 (380) ARG382 0 0 18 11 0 0 0 0 (419) MET421 0 0 0 0 0 0 1 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltMlflcatkfsas >4rno_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN POLYMERASE ETA EXTENDING AN ABASIC SITE-DA PAIR BY INSERTING DCTP OPPOSITE TEMPLATE G organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DA(P8):DG(T4) chainA ( 38) GLN38 0 0 0 0 0 0 0 6 ( 48) ILE48 0 0 0 0 0 0 0 5 (372) LEU378 0 0 0 0 0 0 2 0 (376) ARG382 0 0 15 5 0 0 0 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewspltmlflcatkfsas >4roc_AB:TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon; title=HUMAN TFIIB-RELATED FACTOR 2 (BRF2) AND TBP BOUND TO U6#2 PROMOTER organism=HOMO SAPIENS DNA sequence DC(T1):DG(N28) DT(T2):DA(N27) DG(T3):DC(N26) DT(T4):DA(N25) DC(T5):DG(N24) DA(T6):DT(N23) DC(T7):DG(N22) DA(T8):DT(N21) DC(T9):DG(N20) DC(T10):DG(N19) DT(T11):DA(N18) DA(T12):DT(N17) DT(T13):DA(N16) DT(T14):DA(N15) DT(T15):DA(N14) DT(T16):DA(N13) DA(T17):DT(N12) DA(T18):DT(N11) DG(T19):DC(N10) DC(T20):DG(N9) DC(T21):DG(N8) DC(T22):DG(N7) DT(T23):DA(N6) DT(T24):DA(N5) DC(T25):DG(N4) DA(T26):DT(N3) DA(T27):DT(N2) chainA ( 44) ALA108 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG110 0 0 0 0 0 0 4 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) TYR260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 10 0 0 0 0 0 chainB ( 11) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PHE197 0 0 0 0 0 0 0 0 0 0 10 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU212 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) PHE214 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) VAL220 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR222 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 (103) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 (132) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 0 0 0 0 0 0 0 0 0 (133) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (147) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 (149) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (155) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 (157) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vsrsqqrglrrvrdlcrvlqlpptfedtavayyqqayrhsgirAaRlqkkevlvgccvlitcrqhnwpltmgaictllyadldvfsstymqivkllgldvpslclaelvktycssfklfqaspsvpakyvedkekmlsrtmqlvelanetwlvtgrhplpvitaatflawqslqpadrlscslarfcklanvdlpYpassrlqellavllrmaeqlawlrvlrldkrsvvkhigdllqhrqslvrsafrdlllppcmlkspkricpvppvstvtgdenisdseieqylrtpqevrdfqraqa/gpsgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkg >4roc_B:TATA-box_binding_protein-like; title=HUMAN TFIIB-RELATED FACTOR 2 (BRF2) AND TBP BOUND TO U6#2 PROMOTER organism=HOMO SAPIENS DNA sequence DT(N2):DA(T27) DT(N3):DA(T26) DG(N4):DC(T25) DA(N5):DT(T24) DA(N6):DT(T23) DG(N7):DC(T22) DG(N8):DC(T21) DG(N9):DC(T20) DC(N10):DG(T19) DT(N11):DA(T18) DT(N12):DA(T17) DA(N13):DT(T16) DA(N14):DT(T15) DA(N15):DT(T14) DA(N16):DT(T13) DT(N17):DA(T12) DA(N18):DT(T11) DG(N19):DC(T10) DG(N20):DC(T9) DT(N21):DA(T8) DG(N22):DC(T7) DT(N23):DA(T6) DG(N24):DC(T5) DA(N25):DT(T4) DC(N26):DG(T3) DA(N27):DT(T2) DG(N28):DC(T1) chainB ( 11) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 10 0 0 0 0 0 0 0 0 0 0 ( 56) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 ( 58) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 64) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 (101) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) VAL259 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) PHE288 0 0 0 0 0 0 0 0 0 9 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) PRO289 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) LEU303 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) PHE305 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) VAL311 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) THR313 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gpsgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkg >4rod_A:Cyclin-like; title=HUMAN TFIIB-RELATED FACTOR 2 (BRF2) AND TBP BOUND TO TRNAU1 PROMOTER organism=HOMO SAPIENS DNA sequence DT(N2):DA(T27) DT(N3):DA(T26) DT(N4):DA(T25) DG(N5):DC(T24) DC(N6):DG(T23) DG(N7):DC(T22) DA(N8):DT(T21) DT(N9):DA(T20) DC(N10):DG(T19) DC(N11):DG(T18) DT(N12):DA(T17) DT(N13):DA(T16) DA(N14):DT(T15) DT(N15):DA(T14) DA(N16):DT(T13) DT(N17):DA(T12) DA(N18):DT(T11) DG(N19):DC(T10) DC(N20):DG(T9) DT(N21):DA(T8) DG(N22):DC(T7) DC(N23):DG(T6) DG(N24):DC(T5) DC(N25):DG(T4) DG(N26):DC(T3) DG(N27):DC(T2) DG(N28):DC(T1) chainA ( 43) ALA108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 ( 45) ARG110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 5 0 0 0 0 0 0 (195) TYR260 0 0 0 0 1 11 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence srsqqrglrrvrdlcrvlqlpptfedtavayyqqayrhsgirAaRlqkkevlvgccvlitcrqhnwpltmgaictllyadldvfsstymqivkllgldvpslclaelvktycssfklfqaspsvpakyvedkekmlsrtmqlvelanetwlvtgrhplpvitaatflawqslqpadrlscslarfcklanvdlpYpassrlqellavllrmaeqlawlrvlrldkrsvvkhigdllqhrqslvrsafrdglllppcmlkspkricpvppvstvtgdenisdseieqylrtpqevrdfqraqa >4rod_AB:TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon; title=HUMAN TFIIB-RELATED FACTOR 2 (BRF2) AND TBP BOUND TO TRNAU1 PROMOTER organism=HOMO SAPIENS DNA sequence DC(T1):DG(N28) DC(T2):DG(N27) DC(T3):DG(N26) DG(T4):DC(N25) DC(T5):DG(N24) DG(T6):DC(N23) DC(T7):DG(N22) DA(T8):DT(N21) DG(T9):DC(N20) DC(T10):DG(N19) DT(T11):DA(N18) DA(T12):DT(N17) DT(T13):DA(N16) DA(T14):DT(N15) DT(T15):DA(N14) DA(T16):DT(N13) DA(T17):DT(N12) DG(T18):DC(N11) DG(T19):DC(N10) DA(T20):DT(N9) DT(T21):DA(N8) DC(T22):DG(N7) DG(T23):DC(N6) DC(T24):DG(N5) DA(T25):DT(N4) DA(T26):DT(N3) DA(T27):DT(N2) chainA ( 43) ALA108 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG110 0 0 0 0 0 0 5 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) TYR260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 1 0 0 0 0 chainB ( 10) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) PHE197 0 0 0 0 0 0 0 0 0 0 9 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) LEU212 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) PHE214 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) VAL220 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) THR222 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 (102) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 (131) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 10 0 0 0 0 0 0 0 0 0 (132) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (146) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 (148) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (154) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 (156) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence srsqqrglrrvrdlcrvlqlpptfedtavayyqqayrhsgirAaRlqkkevlvgccvlitcrqhnwpltmgaictllyadldvfsstymqivkllgldvpslclaelvktycssfklfqaspsvpakyvedkekmlsrtmqlvelanetwlvtgrhplpvitaatflawqslqpadrlscslarfcklanvdlpYpassrlqellavllrmaeqlawlrvlrldkrsvvkhigdllqhrqslvrsafrdglllppcmlkspkricpvppvstvtgdenisdseieqylrtpqevrdfqraqa/psgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkg >4roe_A:Cyclin-like; title=HUMAN TFIIB-RELATED FACTOR 2 (BRF2) AND TBP BOUND TO RPPH1 PROMOTER organism=HOMO SAPIENS DNA sequence DC(N3):DG(T27) DA(N4):DT(T26) DT(N5):DA(T25) DA(N6):DT(T24) DC(N7):DG(T23) DA(N8):DT(T22) DG(N9):DC(T21) DA(N10):DT(T20) DA(N11):DT(T19) DC(N12):DG(T18) DT(N13):DA(T17) DT(N14):DA(T16) DA(N15):DT(T15) DT(N16):DA(T14) DA(N17):DT(T13) DA(N18):DT(T12) DG(N19):DC(T11) DA(N20):DT(T10) DT(N21):DA(T9) DT(N22):DA(T8) DC(N23):DG(T7) DC(N24):DG(T6) DC(N25):DG(T5) DA(N26):DT(T4) DA(N27):DT(T3) DA(N28):DT(T2) chainA ( 45) ALA108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 47) ARG110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 6 0 0 0 0 0 (197) TYR260 0 0 0 0 0 5 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qvsrsqqrglrrvrdlcrvlqlpptfedtavayyqqayrhsgirAaRlqkkevlvgccvlitcrqhnwpltmgaictllyadldvfsstymqivkllgldvpslclaelvktycssfklfqaspsvpakyvedkekmlsrtmqlvelanetwlvtgrhplpvitaatflawqslqpadrlscslarfcklanvdlpYpassrlqellavllrmaeqlawlrvlrldkrsvvkhigdllqhrqslvrsafrdlllppcmlkspkricpvppvstvtgdenisdseieqylrtpqevrdfqraqaarqa >4roe_AB:TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon; title=HUMAN TFIIB-RELATED FACTOR 2 (BRF2) AND TBP BOUND TO RPPH1 PROMOTER organism=HOMO SAPIENS DNA sequence DT(T2):DA(N28) DT(T3):DA(N27) DT(T4):DA(N26) DG(T5):DC(N25) DG(T6):DC(N24) DG(T7):DC(N23) DA(T8):DT(N22) DA(T9):DT(N21) DT(T10):DA(N20) DC(T11):DG(N19) DT(T12):DA(N18) DT(T13):DA(N17) DA(T14):DT(N16) DT(T15):DA(N15) DA(T16):DT(N14) DA(T17):DT(N13) DG(T18):DC(N12) DT(T19):DA(N11) DT(T20):DA(N10) DC(T21):DG(N9) DT(T22):DA(N8) DG(T23):DC(N7) DT(T24):DA(N6) DA(T25):DT(N5) DT(T26):DA(N4) DG(T27):DC(N3) chainA ( 45) ALA108 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG110 0 0 0 0 0 6 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) TYR260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 5 0 0 0 0 0 chainB ( 10) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) VAL169 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) PHE197 0 0 0 0 0 0 0 0 0 11 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ALA198 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) LEU212 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) PHE214 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) VAL220 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) THR222 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 (102) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 (131) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 11 0 0 0 0 0 0 0 0 0 (132) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (146) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 (148) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (154) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 (156) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qvsrsqqrglrrvrdlcrvlqlpptfedtavayyqqayrhsgirAaRlqkkevlvgccvlitcrqhnwpltmgaictllyadldvfsstymqivkllgldvpslclaelvktycssfklfqaspsvpakyvedkekmlsrtmqlvelanetwlvtgrhplpvitaatflawqslqpadrlscslarfcklanvdlpYpassrlqellavllrmaeqlawlrvlrldkrsvvkhigdllqhrqslvrsafrdlllppcmlkspkricpvppvstvtgdenisdseieqylrtpqevrdfqraqaarqa/psgivpqlqNiVstvnlgckldlktialrarnaeynpkrFAavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkg >4rpy_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA WITH GAPPED DNA CONTAINING AN 8-OXO-7,8- DIHYDRO-GUANINE(8-OXOG) AND DCTP SOAKED WITH MGCL2 FOR 30 S organism=HOMO SAPIENS DNA sequence DC(T5):DC(P11) DG(T7):DC(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA ( 25) HIS34 29 0 0 0 0 0 0 0 0 0 0 (225) LYS234 0 0 0 6 0 0 0 0 0 0 0 (262) TYR271 6 10 0 0 0 0 0 0 0 0 0 (267) ASP276 7 0 0 0 0 0 0 0 0 0 0 (270) ASN279 5 0 0 0 0 0 0 0 0 0 0 (274) ARG283 0 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4rpz_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA WITH GAPPED DNA CONTAINING AN 8-OXO-7,8- DIHYDRO-GUANINE (8-OXOG)AND DCTP SOAKED WITH MGCL2 FOR 60 S organism=HOMO SAPIENS DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) DC(P11):DC(T5) chainA ( 25) HIS34 0 0 0 0 0 0 0 0 0 0 29 (225) LYS234 0 0 0 0 0 0 0 6 0 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 9 6 (267) ASP276 0 0 0 0 0 0 0 0 0 0 10 (270) ASN279 0 0 0 0 0 0 0 0 0 0 5 (274) ARG283 0 0 0 0 0 0 0 0 0 3 0 prot.sequence tlnggitdmltelanfeknvsqaiHkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4rq0_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA WITH GAPPED DNA CONTAINING AN 8-OXO-7,8- DIHYDRO-GUANINE (8-OXOG)AND DCTP SOAKED WITH MGCL2 FOR 80 S organism=HOMO SAPIENS DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) DC(P11):DC(T5) chainA ( 26) HIS34 0 0 0 0 0 0 0 0 0 0 29 (226) LYS234 0 0 0 0 0 0 0 6 0 0 0 (263) TYR271 0 0 0 0 0 0 0 0 0 9 6 (268) ASP276 0 0 0 0 0 0 0 0 0 0 8 (271) ASN279 0 0 0 0 0 0 0 0 0 0 5 (275) ARG283 0 0 0 0 0 0 0 0 0 4 0 prot.sequence etlnggitdmltelanfeknvsqaiHkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4rq1_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA WITH GAPPED DNA CONTAINING AN 8-OXO-7,8- DIHYDRO-GUANINE(8-OXOG) AND DCTP SOAKED WITH MGCL2 FOR 1HR organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 35 ( 26) LYS35 0 0 0 0 7 ( 29) ALA38 0 0 0 0 3 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdr >4rq3_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=PRECATALYTIC TERNARY COMPLEX OF HUMAN DNA POLYMERASE BETA WITH GAPPED DNA CONTAINING AN 8-OXO-7,8-DIHYDRO-GUANINE (8-OXOG) AND DATP IN THE PRESENCE OF CACL2 organism=HOMO SAPIENS DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 32 ( 26) LYS35 0 0 0 0 6 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4rq7_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA WITH GAPPED DNA CONTAINING AN 8-OXO-7,8- DIHYDRO-GUANINE (8-OXOG)AND DATP SOAKED WITH MGCL2 FOR 1HR organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) chainA (225) LYS234 0 0 0 0 0 0 0 6 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrs >4rt2_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH (ALPHA,BETA)-CH2-(BETA,GAMMA)-NH-DTTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 34 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4rt3_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH (ALPHA, BETA)-NH-(BETA,GAMMA)-CH2-DTTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 33 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4rtj_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=A NON-COGNATE COMPLEX OF ESCHERICHIA COLI DNA ADENINE METHYLTRANSFERASE (DAM) WITH DNA AND SINEFUNGIN organism=ESCHERICHIA COLI DNA sequence DT(G1):DA(F12) DC(G2):DG(F11) DT(G3):DA(F10) DA(G4):DT(F9) DG(G5):DC(F8) DA(G6):DT(F7) DT(G7):DA(F6) DC(G8):DG(F5) DT(G9):DA(F4) DA(G10):DT(F3) DG(G11):DC(F2) DA(G12):DT(F1) chainA ( 90) TYR92 0 0 0 0 0 0 0 0 0 0 0 13 ( 93) ARG95 0 0 0 0 0 0 0 0 0 0 0 1 (122) ARG124 0 0 0 0 0 0 0 0 0 16 12 0 (130) ASN132 0 0 0 0 0 0 0 0 0 2 0 0 (132) PRO134 0 0 0 0 0 0 0 0 0 0 6 0 prot.sequence knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlislynivkmrtdeyvqaarelfvpetncaevyYqfReefnksqdpfrravlflylnrygynglcRynlrgefNvPfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddssvvycdppyaplstnsftleqqahlaeiaeglverhipvlisnhdtmltrewyqraklhvvkvrrrkkvdellalykp >4rtk_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=COMPLEX OF ESCHERICHIA COLI DNA ADENINE METHYLTRANSFERASE (DAM) WITH SAH AND WITH DNA CONTAINING DISTAL PAP REGULON SEQUENCE organism=Escherichia coli DNA sequence DC(G2):DG(F11) DG(G3):DC(F10) DA(G4):DT(F9) DT(G5):DA(F8) DC(G6):DG(F7) DT(G7):DA(F6) DT(G8):DA(F5) DT(G9):DA(F4) DA(G10):DT(F3) DG(G11):DC(F2) chainA (122) ARG124 0 0 0 0 0 0 0 0 19 12 (130) ASN132 0 0 0 0 0 0 0 0 2 0 (132) PRO134 0 0 0 0 0 0 0 0 0 7 prot.sequence knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlislynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygynglcRynlrgefNvPfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddssvvycdppyaplssftleqqahlaeiaeglverhipvlisnhdtmltrewyqraklhvvkvkvdellalykp >4rtl_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=COMPLEX OF ESCHERICHIA COLI DNA ADENINE METHYLTRANSFERASE (DAM) WITH SINEFUNGIN AND WITH DNA CONTAINING DISTAL PAP REGULON SEQUENCE organism=Escherichia coli DNA sequence DA(G1) DC(G2) DG(G3) DA(G4) DT(G5) DC(G6) DT(G7) DT(G8) DT(G9) DA(G10) DG(G11) chainA (122) ARG124 0 0 0 0 0 0 0 0 0 14 10 (130) ASN132 0 0 0 0 0 0 0 0 0 1 0 (132) PRO134 0 0 0 0 0 0 0 0 0 0 5 prot.sequence knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlislynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygynglcRynlrgefNvPfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddssvvycdppyaplsansftleqqahlaeiaeglverhipvlisnhdtmltrewyqraklhvvkvrrsirkkvdellalykpg >4rtm_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=COMPLEX OF ESCHERICHIA COLI DNA ADENINE METHYLTRANSFERASE (DAM) WITH ADOMET AND WITH DNA CONTAINING DISTAL PAP REGULON SEQUENCE organism=Escherichia coli DNA sequence DA(G1) DC(G2) DG(G3) DA(G4) DT(G5) DC(G6) DT(G7) DT(G8) DT(G9) DA(G10) DG(G11) chainA (122) ARG124 0 0 0 0 0 0 0 0 0 19 12 (130) ASN132 0 0 0 0 0 0 0 0 0 2 0 (132) PRO134 0 0 0 0 0 0 0 0 0 0 7 prot.sequence knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlislynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygynglcRynlrgefNvPfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddssvvycdppyaplsnsftleqqahlaeiaeglverhipvlisnhdtmltrewyqraklhvvkkvdellalykp >4rtn_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=COMPLEX OF ESCHERICHIA COLI DNA ADENINE METHYLTRANSFERASE (DAM) WITH ADOHCY AND WITH DNA CONTAINING PROXIMAL PAP REGULON SEQUENCE organism=Escherichia coli DNA sequence DT(F2):DA(G11) DT(F3):DA(G10) DA(F4):DT(G9) DA(F5):DT(G8) DA(F6):DT(G7) DG(F7):DC(G6) DA(F8):DT(G5) DT(F9):DA(G4) DC(F10):DG(G3) DG(F11):DC(G2) chainA (122) ARG124 0 0 0 0 0 0 0 0 16 12 (130) ASN132 0 0 0 0 0 0 0 0 1 0 (132) PRO134 0 0 0 0 0 0 0 0 0 7 prot.sequence knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlislynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygynglcRynlrgefNvPfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddssvvycdppyaplssftleqqahlaeiaeglverhipvlisnhdtmltrewyqraklhvvkvrrskkvdellalykp >4rto_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=COMPLEX OF ESCHERICHIA COLI DNA ADENINE METHYLTRANSFERASE (DAM) WITH SINEFUNGIN AND WITH DNA CONTAINING PROXIMAL PAP REGULON SEQUENCE organism=Escherichia coli DNA sequence DC(G2):DG(F11) DG(G3):DC(F10) DA(G4):DT(F9) DT(G5):DA(F8) DC(G6):DG(F7) DT(G7):DA(F6) DT(G8):DA(F5) DT(G9):DA(F4) DA(G10):DT(F3) DA(G11):DT(F2) chainA (122) ARG124 12 16 0 0 0 0 0 0 0 0 (130) ASN132 0 2 0 0 0 0 0 0 0 0 (132) PRO134 7 0 0 0 0 0 0 0 0 0 prot.sequence knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlislynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygynglcRynlrgefNvPfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddssvvycdppyaplssftleqqahlaeiaeglverhipvlisnhdtmltrewyqraklhvvkvrrskkvdellalykp >4rtp_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=COMPLEX OF ESCHERICHIA COLI DNA ADENINE METHYLTRANSFERASE (DAM) WITH ADOMET AND WITH DNA CONTAINING PROXIMAL PAP REGULON SEQUENCE organism=Escherichia coli DNA sequence DC(G2):DG(F11) DG(G3):DC(F10) DA(G4):DT(F9) DT(G5):DA(F8) DC(G6):DG(F7) DT(G7):DA(F6) DT(G8):DA(F5) DT(G9):DA(F4) DA(G10):DT(F3) DA(G11):DT(F2) chainA (122) ARG124 12 16 0 0 0 0 0 0 0 0 (130) ASN132 0 2 0 0 0 0 0 0 0 0 (132) PRO134 7 0 0 0 0 0 0 0 0 0 prot.sequence knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlislynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygynglcRynlrgefNvPfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddssvvycdppyaplssftleqqahlaeiaeglverhipvlisnhdtmltrewyqraklhvvkvkkvdellalykp >4rtq_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=COMPLEX OF ESCHERICHIA COLI DNA ADENINE METHYLTRANSFERASE (DAM) WITH ADOHCY AND A 5-BP NON-CANONICAL SITE (GTTTA ) organism=Escherichia coli DNA sequence DT(G2):DA(F12) DT(G3):DA(F11) DA(G4):DT(F10) DA(G5):DT(F9) DG(G6):DC(F8) DT(G7):DA(F7) DT(G8):DA(F6) DT(G9):DA(F5) DA(G10):DT(F4) DA(G11):DT(F3) DG(G12):DC(F2) chainA (122) ARG124 0 0 0 0 0 0 0 0 0 19 12 (130) ASN132 0 0 0 0 0 0 0 0 0 2 0 (132) PRO134 0 0 0 0 0 0 0 0 0 0 9 prot.sequence knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlislynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygynglcRynlrgefNvPfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddssvvycdppyaplsasftleqqahlaeiaeglverhipvlisnhdtmltrewyqraklhvvkvdellalykpgv >4rtr_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=COMPLEX OF ESCHERICHIA COLI DNA ADENINE METHYLTRANSFERASE (DAM) WITH ADOMET AND A 5-BP NON-CANONICAL SITE (GTTTA ) organism=Escherichia coli DNA sequence DT(G2):DA(F12) DT(G3):DA(F11) DA(G4):DT(F10) DA(G5):DT(F9) DG(G6):DC(F8) DT(G7):DA(F7) DT(G8):DA(F6) DT(G9):DA(F5) DA(G10):DT(F4) DA(G11):DT(F3) DG(G12):DC(F2) chainA (122) ARG124 0 0 0 0 0 0 0 0 0 19 12 (130) ASN132 0 0 0 0 0 0 0 0 0 2 0 (132) PRO134 0 0 0 0 0 0 0 0 0 0 9 prot.sequence knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlislynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygynglcRynlrgefNvPfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddssvvycdppyaplsftleqqahlaeiaeglverhipvlisnhdtmltrewyqraklhvvkvdellalykpgv >4rts_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=COMPLEX OF ESCHERICHIA COLI DNA ADENINE METHYLTRANSFERASE (DAM) WITH ADOMET AND A 5-BP NON-CANONICAL SITE (GTCTA) organism=Escherichia coli DNA sequence DC(F2):DG(G12) DT(F3):DA(G11) DT(F4):DA(G10) DA(F5):DT(G9) DG(F6):DC(G8) DA(F7):DT(G7) DC(F8):DG(G6) DT(F9):DA(G5) DT(F10):DA(G4) DA(F11):DT(G3) DG(F12):DC(G2) chainA (122) ARG124 12 17 0 0 0 0 0 0 0 0 0 (130) ASN132 0 2 0 0 0 0 0 0 0 0 0 (132) PRO134 9 0 0 0 0 0 0 0 0 0 0 prot.sequence knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlislynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygynglcRynlrgefNvPfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddssvvycdppyaplssftleqqahlaeiaeglverhipvlisnhdtmltrewyqraklhvvkvdellalykp >4ru9_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING DCMPNPP OPPOSITE A MEFAPY-DG ADDUCTED DNA TEMPLATE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (317) SER322 0 2 0 0 0 0 0 0 (373) LEU378 0 3 2 0 0 0 0 0 (377) ARG382 0 0 0 0 2 4 0 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4rua_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF Y-FAMILY DNA POLYMERASE DPO4 BYPASSING A MEFAPY- DG ADDUCT organism=Sulfolobus solfataricus P2 DNA sequence DG(T406):DC(P513) DA(T407):DT(P512) DA(T408):DT(P511) DT(T409):DA(P510) DC(T410):DG(P509) DC(T411):DG(P508) DT(T412):DA(P507) DT(T413):DA(P506) DC(T414):DG(P505) DC(T415):DG(P504) DC(T416):DG(P503) DC(T417):DG(P502) DC(T418):DG(P501) chainA (336) ARG336 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >4ruc_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF Y-FAMILY DNA POLYMERASE DPO4 EXTENDING FROM A MEFAPY-DG:DC PAIR organism=Sulfolobus solfataricus P2 DNA sequence DT(T404):DC(P514) DT(T406):DA(P513) DA(T407):DT(P512) DA(T408):DT(P511) DT(T409):DA(P510) DC(T410):DG(P509) DC(T411):DG(P508) DT(T412):DA(P507) DT(T413):DA(P506) DC(T414):DG(P505) DC(T415):DG(P504) DC(T416):DG(P503) DC(T417):DG(P502) DC(T418):DG(P501) chainA ( 32) VAL32 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ARG332 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >4rul_A:Prokaryotic_type_I_DNA_topoisomerase;Zinc_beta-ribbon; title=CRYSTAL STRUCTURE OF FULL-LENGTH E.COLI TOPOISOMERASE I IN COMPLEX WITH SSDNA organism=Escherichia coli DH1 DNA sequence DT(B17) DA(B18) DT(B19) DG(B20) DC(B21) DG(B22) DA(B23) DT(B24) DT(B25) DT(B26) DG(B27) DG(B28) DG(B29) chainA (584) ARG609 0 0 0 0 0 0 0 0 0 0 0 0 10 (586) ALA611 0 0 0 0 0 0 0 0 0 0 0 1 0 (588) THR613 0 0 0 0 0 0 0 0 0 0 7 7 0 (591) PHE616 0 0 0 0 0 0 0 0 0 0 0 43 0 (597) TYR622 0 0 0 0 0 0 0 0 0 0 0 0 57 (606) LYS631 0 0 0 0 0 0 0 0 0 0 0 0 2 (608) THR633 0 0 0 0 0 0 0 0 0 0 2 12 1 (610) ASN635 0 0 0 0 0 0 0 0 0 0 6 12 0 (699) ARG724 0 0 0 0 0 0 0 0 0 35 0 0 0 (700) PHE725 0 0 0 0 0 0 0 43 11 0 0 0 0 (703) TYR728 0 0 0 0 0 0 0 0 26 0 0 0 0 (714) THR739 0 0 0 0 0 0 0 0 1 0 0 0 0 (748) ARG773 0 0 0 0 0 0 3 0 0 0 0 0 0 (752) ALA777 0 0 0 0 6 4 0 0 0 0 0 0 0 (755) PHE780 0 0 0 0 0 47 6 0 0 0 0 0 0 (757) ALA782 0 0 0 0 0 0 3 0 0 0 0 0 0 (761) PHE786 0 0 0 0 0 0 29 14 0 0 0 0 0 (762) PRO787 0 0 0 0 0 0 0 8 0 0 0 0 0 (765) ARG790 0 0 0 0 0 0 2 1 0 0 0 0 0 (767) THR792 0 0 0 0 0 11 4 0 0 0 0 0 0 (799) ARG833 0 0 0 1 5 0 0 0 0 0 0 0 0 (805) TYR839 0 0 5 0 0 0 0 0 0 0 0 0 0 (807) SER841 0 0 1 0 0 0 0 0 0 0 0 0 0 (813) SER852 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence gkalvivespakaktinkylgsdyvvkssvghirdlptkdergalvnrmgvdpwhnweahyevlpgkekvvselkqlaekadhiylatdldregeaiawhlreviggddarysrvvfneitknairqafnkpgelnidrvnaqqarrfmdrvvgymvspllwkkiarglsagrvqsvavrlvverereikafvpeefwevdastttpsgealalqvthqndkpfrpvnkeqtqaavsllekarysvleredkpttskpgapfitstlqqaastrlgfgvkktmmmaqrlyeagyitymrtdstnlsqdavnmvrgyisdnfgkkylpespnqyaskqeaheairpsdvnvmaeslkdmeadaqklyqliwrqfvacqmtpakydsttltvgagdfrlkargrilrfdgwtkvmpalrkgdedrilpavnkgdaltlveltpaqhftkpparfseaslvkelekrgigrpstyasiistiqdrgyvrvenrrfyaekmgeivtdrleenfrelmnydftaqmensldqvanheaewkavldhffsdftqqldkaekdpeeggmrpnqmvltsidcptcgrkmgiRtAsTgvFlgcsgYalppkercKtTiNlvpenevlnvlegedaetnalrakrrcpkcgtamdsylidpkrklhvcgnnptcdgyeieegefrikgydgpivecekcgsemhlkmgRFgkYmactneecknTrkilrngevappkedpvplpelpceksdayfvlRdgaAgvFlAantFPksReTraplveefrdrlpeklryladapnktmvrfsRktkqqYvSsekgwSafyvdgkwve >4rve_AB:Restriction_endonuclease-like; title=THE CRYSTAL STRUCTURE OF ECORV ENDONUCLEASE AND OF ITS COMPLEXES WITH COGNATE AND NON-COGNATE DNA SEGMENTS organism=Escherichia coli DNA sequence DG(E1):DC(D10) DG(E2):DC(D9) DG(E3):DC(D8) DA(E4):DT(D7) DT(E5):DA(D6) DA(E6):DT(D5) DT(E7):DA(D4) DC(E8):DG(D3) DC(E9):DG(D2) DC(E10):DG(D1) chainA ( 37) LYS38 0 0 0 0 0 8 0 0 0 0 ( 68) GLN69 0 0 0 1 0 0 0 0 0 0 ( 69) ASN70 0 0 5 5 1 0 0 0 0 0 (105) THR106 0 0 0 0 0 0 4 0 0 0 (182) SER183 0 0 0 0 0 0 3 5 0 0 (184) ASN185 0 0 0 0 0 0 13 21 0 0 (185) THR186 0 0 0 0 3 1 8 1 0 0 (187) ASN188 0 0 0 0 0 0 3 0 0 0 chainB ( 37) LYS38 0 0 0 0 5 0 0 0 0 0 ( 69) ASN70 0 0 0 0 0 3 3 2 0 0 (105) THR106 0 0 0 9 0 0 0 0 0 0 (182) SER183 0 0 3 6 0 0 0 0 0 0 (184) ASN185 0 0 16 12 0 0 0 0 0 0 (185) THR186 0 0 0 9 1 3 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtKvlstifelfsrpiinkiaekhgyiveepkqQNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiy/slrsdlinalydenqkydvcgiisaegkiyplgsdtKvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiy >4rve_C:Restriction_endonuclease-like; title=THE CRYSTAL STRUCTURE OF ECORV ENDONUCLEASE AND OF ITS COMPLEXES WITH COGNATE AND NON-COGNATE DNA SEGMENTS organism=Escherichia coli DNA sequence DG(F1) DG(F2) DG(F3) DA(F4) DT(F5) DA(F6) DT(F7) DC(F8) DC(F9) DC(F10) chainC ( 37) LYS38 0 0 0 0 0 3 0 0 0 0 ( 69) ASN70 0 0 0 4 0 0 0 0 0 0 (105) THR106 0 0 0 0 0 0 4 0 0 0 (182) SER183 0 0 0 0 0 0 7 2 0 0 (185) THR186 0 0 0 2 9 3 6 0 0 0 (187) ASN188 0 0 0 0 1 0 4 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtKvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgnTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiy >4rzr_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=BYPASS OF A BULKY ADDUCT DG1,8 BY DPO4 organism=Sulfolobus solfataricus DNA sequence DG(B6):DC(C13) DA(B7):DT(C12) DC(B8):DG(C11) DT(B9):DA(C10) DG(B10):DC(C9) DG(B11):DC(C8) DT(B12):DA(C7) DA(B13):DT(C6) DT(B14):DA(C5) DT(B15):DA(C4) DG(B16):DC(C3) DG(B17):DC(C2) DG(B18):DC(C1) chainA (285) HIS285 0 0 0 0 0 0 4 0 0 0 0 0 0 (297) SER297 0 0 0 0 0 1 2 0 0 0 0 0 0 (332) ARG332 2 1 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 0 23 13 1 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivSrgrtfphgisketaysesvkllqkileederkirRigvRfskfie >4s04_EF: title=CRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE PMRA IN COMPLEX WITH PMRA BOX DNA organism=Klebsiella pneumoniae DNA sequence DA(G1):DT(H24) DT(G2):DA(H23) DT(G3):DA(H22) DT(G4):DA(H21) DC(G5):DG(H20) DT(G6):DA(H19) DT(G7):DA(H18) DA(G8):DT(H17) DA(G9):DT(H16) DT(G10):DA(H15) DA(G11):DT(H14) DT(G12):DA(H13) DT(G13):DA(H12) DA(G14):DT(H11) DT(G15):DA(H10) DC(G16):DG(H9) DC(G17):DG(H8) DT(G18):DA(H7) DA(G19):DT(H6) DA(G20):DT(H5) DG(G21):DC(H4) DC(G22):DG(H3) DA(G23):DT(H2) DA(G24):DT(H1) chainE (188) ASN188 0 0 0 0 0 0 0 5 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) VAL192 0 0 0 0 0 2 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) HIS193 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) HIS195 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) ARG210 0 0 0 0 0 0 0 0 0 0 0 6 4 5 0 0 0 0 0 0 0 0 0 0 chainF (187) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 (188) ASN188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 5 3 0 0 0 (191) GLU191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 (192) VAL192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 (195) HIS195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 (210) ARG210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 prot.sequence mkilvieddalllqglilamqsegyvcdgvstaheaalslasnhyslivldlglpdedglhflsrmrrekmtqpvliltardtledrisgldtgaddylvkpfaleelnarirallrrhnnqgdneisvgnlrlnvtrrlvwlgetaldltpkeyallsrlmmkagspvhreilyndiysgdnepatNtleVHiHnlrekigksrirtvRgfgymlann/mkilvieddalllqglilamqsegyvcdgvstaheaalslasnhyslivldlglpdedglhflsrmrrekmtqpvliltardtledrisgldtgaddylvkpfaleelnarirallrrhnnqgdneisvgnlrlnvtrrlvwlgetaldltpkeyallsrlmmkagspvhreilyndiysgdnepaTNtlEVhiHnlrekigksrirtvRgfgymlann >4s04_F:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE PMRA IN COMPLEX WITH PMRA BOX DNA organism=Klebsiella pneumoniae DNA sequence DT(H1):DA(G24) DT(H2):DA(G23) DG(H3):DC(G22) DC(H4):DG(G21) DT(H5):DA(G20) DT(H6):DA(G19) DA(H7):DT(G18) DG(H8):DC(G17) DG(H9):DC(G16) DA(H10):DT(G15) DT(H11):DA(G14) DA(H12):DT(G13) DA(H13):DT(G12) DT(H14):DA(G11) DA(H15):DT(G10) DT(H16):DA(G9) DT(H17):DA(G8) DA(H18):DT(G7) DA(H19):DT(G6) DG(H20):DC(G5) DA(H21):DT(G4) DA(H22):DT(G3) DA(H23):DT(G2) DT(H24):DA(G1) chainF (187) THR187 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) ASN188 0 0 0 3 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) GLU191 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) VAL192 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) HIS195 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) ARG210 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkilvieddalllqglilamqsegyvcdgvstaheaalslasnhyslivldlglpdedglhflsrmrrekmtqpvliltardtledrisgldtgaddylvkpfaleelnarirallrrhnnqgdneisvgnlrlnvtrrlvwlgetaldltpkeyallsrlmmkagspvhreilyndiysgdnepaTNtlEVhiHnlrekigksrirtvRgfgymlann >4s05_A:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE PMRA IN COMPLEX WITH PMRA BOX DNA organism=Klebsiella pneumoniae DNA sequence DC(D1):DG(C25) DT(D2):DA(C24) DT(D3):DA(C23) DG(D4):DC(C22) DC(D5):DG(C21) DT(D6):DA(C20) DT(D7):DA(C19) DA(D8):DT(C18) DG(D9):DC(C17) DG(D10):DC(C16) DA(D11):DT(C15) DT(D12):DA(C14) DA(D13):DT(C13) DA(D14):DT(C12) DT(D15):DA(C11) DA(D16):DT(C10) DT(D17):DA(C9) DT(D18):DA(C8) DA(D19):DT(C7) DA(D20):DT(C6) DG(D21):DC(C5) DA(D22):DT(C4) DA(D23):DT(C3) DA(D24):DT(C2) DT(D25):DA(C1) chainA (187) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (188) ASN188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 9 1 0 0 0 0 0 0 (191) GLU191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 (192) VAL192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 2 2 0 0 0 0 0 (193) HIS193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (195) HIS195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (210) ARG210 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkilvieddalllqglilamqsegyvcdgvstaheaalslasnhyslivldlglpdedglhflsrmrrekmtqpvliltardtledrisgldtgaddylvkpfaleelnarirallrrhnnqgdneisvgnlrlnvtrrlvwlgetaldltpkeyallsrlmmkagspvhreilyndiysgdnepaTNtlEVHiHnlrekigksrirtvRgfgymlann >4s05_AB: title=CRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE PMRA IN COMPLEX WITH PMRA BOX DNA organism=Klebsiella pneumoniae DNA sequence DA(C1):DT(D25) DT(C2):DA(D24) DT(C3):DA(D23) DT(C4):DA(D22) DC(C5):DG(D21) DT(C6):DA(D20) DT(C7):DA(D19) DA(C8):DT(D18) DA(C9):DT(D17) DT(C10):DA(D16) DA(C11):DT(D15) DT(C12):DA(D14) DT(C13):DA(D13) DA(C14):DT(D12) DT(C15):DA(D11) DC(C16):DG(D10) DC(C17):DG(D9) DT(C18):DA(D8) DA(C19):DT(D7) DA(C20):DT(D6) DG(C21):DC(D5) DC(C22):DG(D4) DA(C23):DT(D3) DA(C24):DT(D2) DG(C25):DC(D1) chainA (187) THR187 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) ASN188 0 0 0 0 0 0 1 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) GLU191 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) VAL192 0 0 0 0 0 2 2 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) HIS193 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) HIS195 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) ARG210 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 chainB (187) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (188) ASN188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 1 0 0 0 0 (189) THR189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (191) GLU191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 (192) VAL192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 2 1 0 0 0 0 0 (195) HIS195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence mkilvieddalllqglilamqsegyvcdgvstaheaalslasnhyslivldlglpdedglhflsrmrrekmtqpvliltardtledrisgldtgaddylvkpfaleelnarirallrrhnnqgdneisvgnlrlnvtrrlvwlgetaldltpkeyallsrlmmkagspvhreilyndiysgdnepaTNtlEVHiHnlrekigksrirtvRgfgymlann/mkilvieddalllqglilamqsegyvcdgvstaheaalslasnhyslivldlglpdedglhflsrmrrekmtqpvliltardtledrisgldtgaddylvkpfaleelnarirallrrhnnqgdneisvgnlrlnvtrrlvwlgetaldltpkeyallsrlmmkagspvhreilyndiysgdnepaTNTlEVhiHnlrekigksrirtvrgfgymlann >4s0h_AB:p53-like_transcription_factors;Homeodomain-like; title=TBX5 DB, NKX2.5 HD, ANF DNA COMPLEX organism=HOMO SAPIENS DNA sequence DC(D1):DG(C19) DC(D2):DG(C18) DA(D3):DT(C17) DC(D4):DG(C16) DT(D5):DA(C15) DT(D6):DA(C14) DC(D7):DG(C13) DA(D8):DT(C12) DA(D9):DT(C11) DA(D10):DT(C10) DG(D11):DC(C9) DG(D12):DC(C8) DT(D13):DA(C7) DG(D14):DC(C6) DT(D15):DA(C5) DG(D16):DC(C4) DA(D17):DT(C3) DG(D18):DC(C2) DA(D19):DT(C1) chainA ( 29) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 (153) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 (170) PHE232 0 0 0 0 0 0 0 0 0 1 2 5 0 0 0 0 0 0 0 (174) PHE236 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 chainB ( 1) ARG142 0 0 0 0 0 5 13 4 0 0 0 0 0 0 0 0 0 0 0 ( 43) ILE184 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) GLN187 1 11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN188 0 0 0 1 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) TYR191 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gikvflherelwlkfhevgtemiitkagRrmfpsykvkvtglnpktkyillmdivpaddhrykfadnkwsvtgkaepampgrlyvhpdspatgahwmrqlvsfqklkltnnhldpfghiilnsmhkyqprlhivkatafcthvfpetafiavTsyqnhkitqlkiennpFakgFrg/RvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYksk >4s0h_B:Homeodomain-like; title=TBX5 DB, NKX2.5 HD, ANF DNA COMPLEX organism=HOMO SAPIENS DNA sequence DT(C1):DA(D19) DC(C2):DG(D18) DT(C3):DA(D17) DC(C4):DG(D16) DA(C5):DT(D15) DC(C6):DG(D14) DA(C7):DT(D13) DC(C8):DG(D12) DC(C9):DG(D11) DT(C10):DA(D10) DT(C11):DA(D9) DT(C12):DA(D8) DG(C13):DC(D7) DA(C14):DT(D6) DA(C15):DT(D5) DG(C16):DC(D4) DT(C17):DA(D3) DG(C18):DC(D2) DG(C19):DC(D1) chainB ( 1) ARG142 0 0 0 0 0 0 0 0 0 0 0 4 13 5 0 0 0 0 0 ( 43) ILE184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 46) GLN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 11 1 ( 47) ASN188 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 1 0 0 0 ( 50) TYR191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 1 0 0 prot.sequence RvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYksk >4s0h_EF:p53-like_transcription_factors;Homeodomain-like; title=TBX5 DB, NKX2.5 HD, ANF DNA COMPLEX organism=HOMO SAPIENS DNA sequence DC(H1):DG(G19) DC(H2):DG(G18) DA(H3):DT(G17) DC(H4):DG(G16) DT(H5):DA(G15) DT(H6):DA(G14) DC(H7):DG(G13) DA(H8):DT(G12) DA(H9):DT(G11) DA(H10):DT(G10) DG(H11):DC(G9) DG(H12):DC(G8) DT(H13):DA(G7) DG(H14):DC(G6) DT(H15):DA(G5) DG(H16):DC(G4) DA(H17):DT(G3) DG(H18):DC(G2) DA(H19):DT(G1) chainE ( 29) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 (154) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 (171) PHE232 0 0 0 0 0 0 0 0 0 1 2 5 0 0 0 0 0 0 0 (175) PHE236 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 chainF ( 43) ILE147 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) GLN150 1 10 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN151 0 0 0 2 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) TYR154 0 0 1 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gikvflherelwlkfhevgtemiitkagRrmfpsykvkvtglnpktkyillmdivpaddhrykfadnkwsvtgkaepampgrlyvhpdspatgahwmrqlvsfqklkltnnhldpfghiilnsmhkyqprlhivkadtafcthvfpetafiavTsyqnhkitqlkiennpFakgFrg/rvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYksk >4s0n_A: title=CRYSTAL STRUCTURE OF HLTF HIRAN DOMAIN BOUND TO DNA organism=Homo sapiens DNA sequence DT(E5) DT(E6) DT(E7) DT(E8) DT(E9) DT(E10) chainA ( 17) TYR72 0 0 0 0 34 0 ( 18) TYR73 0 0 0 0 13 1 ( 36) ASN91 0 0 0 0 0 8 ( 38) TYR93 0 0 0 0 0 28 ( 55) HIS110 0 0 0 0 8 6 ( 57) LYS112 0 0 4 0 0 0 ( 87) PHE142 0 18 0 0 0 0 prot.sequence dsvlfgslrghvvglrYYtgvvnnnemvalqrdpnNpYdknaikvnnvngnqvgHlKkelagalayimdnklaqiegvvpfgannaFtmplhmtfwgkeenrkavsdqlkkhgfklgpapkt >4s2q_D:HMG-box; title=CRYSTAL STRUCTURE OF HMG DOMAIN OF THE CHONDROGENESIS MASTER REGULATOR, SOX9 IN COMPLEX WITH CHIP-SEQ IDENTIFIED DNA ELEMENT organism=Mus musculus DNA sequence DG(B1):DC(A16) DG(B2):DC(A15) DA(B3):DT(A14) DG(B4):DC(A13) DA(B5):DT(A12) DA(B6):DT(A11) DC(B7):DG(A10) DA(B8):DT(A9) DA(B9):DT(A8) DA(B10):DT(A7) DG(B11):DC(A6) DC(B12):DG(A5) DC(B13):DG(A4) chainD ( 5) ARG70 0 0 0 0 0 10 6 0 0 0 0 0 0 ( 8) ASN73 0 0 0 0 0 0 6 5 0 0 0 0 0 ( 10) PHE75 0 0 0 0 0 0 0 5 3 0 0 0 0 ( 11) MET76 0 0 0 0 0 0 0 12 13 0 0 0 0 ( 18) ARG83 0 0 0 0 0 0 0 0 4 8 0 0 0 ( 30) ASN95 0 0 0 0 0 0 0 0 0 6 14 0 0 ( 31) ALA96 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 34) SER99 0 0 0 0 0 0 0 0 5 8 0 0 0 ( 72) TYR137 0 0 0 0 5 8 0 0 0 0 0 0 0 ( 76) ARG141 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence phvkRpmNaFMvwaqaaRrkladqyphlhNAelSktlgklwrllnesekrpfveeaerlrvqhkkdhpdykYqprR >4skn_E:Uracil-DNA_glycosylase-like; title=A NUCLEOTIDE-FLIPPING MECHANISM FROM THE STRUCTURE OF HUMAN URACIL- DNA GLYCOSYLASE BOUND TO DNA organism=Homo sapiens DNA sequence DT(A1):DC(B30) DG(A2):DC(B29) DG(A3):DC(B28) DG(A4):DG(B27) DG(A6):DC(B26) DG(A7):DC(B25) DC(A8):DG(B24) DT(A9):DA(B23) DT(A10):DA(B22) chainE (190) PRO271 0 0 0 8 0 0 0 0 0 (191) ARG272 0 0 0 34 10 0 0 0 0 prot.sequence meffgeswkkhlsgefgkpyfiklmgfvaeerkhytvyppphqvftwtqmcdikdvkvvilgqnpyhgpnqahglcfsvqrpvppppsleniykelstdiedfvhpghgdlsgwakqgvlllnavltvrahqanshkergweqftdavvswlnqnsnglvfllwgsyaqkkgsaidrkrhhvlqtahpsPRsvyrgffgcrhfsktnellqksgkkpidwkel >4tnt_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE OF THE HUMAN MINERALOCORTICOID RECEPTOR IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(D1):DG(C17) DA(D2):DT(C16) DG(D3):DC(C15) DA(D4):DT(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DG(D8):DC(C10) DA(D9):DT(C9) DG(D10):DC(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) DT(D16):DA(C2) DG(D17):DC(C1) chainA ( 25) LYS624 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 ( 26) VAL625 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 30) ARG629 0 0 0 0 0 0 0 0 0 0 15 11 1 0 0 0 0 chainB ( 25) LYS624 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL625 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG629 0 0 0 0 4 13 11 0 0 0 0 0 0 0 0 0 0 prot.sequence skiclvcgdeasgchygvvtcgscKVffkRavegqhnylcagrndciidkirrkncpacrlqkclqagmnlg/skiclvcgdeasgchygvvtcgscKVffkRavegqhnylcagrndciidkirrkncpacrlqkclqagmnlg >4tnt_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE OF THE HUMAN MINERALOCORTICOID RECEPTOR IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(D1):DG(C17) DA(D2):DT(C16) DG(D3):DC(C15) DA(D4):DT(C14) DA(D5):DT(C13) DC(D6):DG(C12) DA(D7):DT(C11) DG(D8):DC(C10) DA(D9):DT(C9) DG(D10):DC(C8) DT(D11):DA(C7) DG(D12):DC(C6) DT(D13):DA(C5) DT(D14):DA(C4) DC(D15):DG(C3) DT(D16):DA(C2) DG(D17):DC(C1) chainB ( 25) LYS624 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL625 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG629 0 0 0 0 4 13 11 0 0 0 0 0 0 0 0 0 0 prot.sequence skiclvcgdeasgchygvvtcgscKVffkRavegqhnylcagrndciidkirrkncpacrlqkclqagmnlg >4tqr_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF Y-FAMILY DNA POLYMERASE DPO4 WITH (5'S)-8,5'-CYCLO- 2'-DEOXYGUANOSINE AND DTTP organism=Sulfolobus solfataricus DNA sequence DG(P1):DC(T18) DG(P2):DC(T17) DG(P3):DC(T16) DG(P4):DC(T15) DG(P5):DC(T14) DA(P6):DT(T13) DA(P7):DT(T12) DG(P8):DC(T11) DG(P9):DC(T10) DA(P10):DT(T9) DT(P11):DA(T8) DT(P12):DA(T7) chainA (244) SER244 0 0 0 0 0 0 0 0 0 1 0 0 (297) SER297 0 0 0 0 0 0 0 2 0 0 0 0 (336) ARG336 0 0 0 0 0 0 0 0 0 1 3 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivSrgrtfphgisketaysesvkllqkileederkirrigvRfskfie >4tqs_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF Y-FAMILY DNA POLYMERASE DPO4 WITH (5'S)-8,5'-CYCLO- 2'-DEOXYGUANOSINE AND DCTP organism=Sulfolobus solfataricus DNA sequence DA(D7):DT(C12) DA(D8):DT(C11) DT(D9):DA(C10) DC(D10):DG(C9) DC(D11):DG(C8) DT(D12):DA(C7) DT(D13):DA(C6) DC(D14):DG(C5) DC(D15):DG(C4) DC(D16):DG(C3) DC(D17):DG(C2) DC(D18):DG(C1) chainB (296) ILE295 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence hmivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldIvSrgrtfphgisketaysesvkllqkileederkirrigvrfskfie >4tug_AB:Metallo-dependent_phosphatases; title=CRYSTAL STRUCTURE OF MJMRE11-DNA2 COMPLEX organism=Methanocaldococcus jannaschii DNA sequence DT(H16):DA(G12) DG(H17):DC(G11) DT(H18):DA(G10) DC(H19):DG(G9) DC(H20):DG(G8) DT(H21):DA(G7) DA(H22):DT(G6) DC(H23):DG(G5) DG(H24):DC(G4) DT(H25):DA(G3) DG(H26):DC(G2) chainA chainB ( 17) ASN17 0 0 0 0 0 0 4 2 1 0 0 prot.sequence rgshmmfvhiadnhlgyrqynlddrekdiydsfklcikkileikpdvvlhsgdlfndlrppvkalriamqafkklhennikvyivagnhemprrlgeesplallkdyvkildgkdvinvngeeificgtyyhkkskreemldklknfeseaknykkkilmlhqginpyipldyelehfdlpkfsyyalghihkrilerfndgilaysgsteiiyrneyedykkegkgfylvdfsgndldisdiekidiecrefvevnikdkksfneavnkiercknkpvvfgkikrefkpwfdtlkdkilinkaiivddefidmpdn/mmfvhiadnhlgyrqyNlddrekdiydsfklcikkileikpdvvlhsgdlfndlrppvkalriamqafkklhennikvyivagnhemprrlgeesplallkdyvkildgkdvinvngeeificgtyyhkkskreemldklknfeseaknykkkilmlhqginpyipldyelehfdlpkfsyyalghihkrilerfndgilaysgsteiiyrneyedykkegkgfylvdfsgndldisdiekidiecrefvevnikdkksfneavnkiercknkpvvfgkikrefkpwfdtlkdkilinkaiivdde >4tug_B:Metallo-dependent_phosphatases; title=CRYSTAL STRUCTURE OF MJMRE11-DNA2 COMPLEX organism=Methanocaldococcus jannaschii DNA sequence DC(G2):DG(H26) DA(G3):DT(H25) DC(G4):DG(H24) DG(G5):DC(H23) DT(G6):DA(H22) DA(G7):DT(H21) DG(G8):DC(H20) DG(G9):DC(H19) DA(G10):DT(H18) DC(G11):DG(H17) DA(G12):DT(H16) chainB ( 17) ASN17 0 0 1 2 4 0 0 0 0 0 0 prot.sequence mmfvhiadnhlgyrqyNlddrekdiydsfklcikkileikpdvvlhsgdlfndlrppvkalriamqafkklhennikvyivagnhemprrlgeesplallkdyvkildgkdvinvngeeificgtyyhkkskreemldklknfeseaknykkkilmlhqginpyipldyelehfdlpkfsyyalghihkrilerfndgilaysgsteiiyrneyedykkegkgfylvdfsgndldisdiekidiecrefvevnikdkksfneavnkiercknkpvvfgkikrefkpwfdtlkdkilinkaiivdde >4tui_AB:Metallo-dependent_phosphatases; title=CRYSTAL STRUCTURE OF MJMRE11-DNA1 COMPLEX organism=Methanocaldococcus jannaschii DNA sequence DT(G9):DA(H18) DG(G10):DC(H17) DG(G11):DC(H16) DC(G12):DG(H15) DA(G13):DT(H14) DC(G14):DG(H13) DG(G15):DC(H12) DT(G16):DA(H11) DA(G17):DT(H10) DG(G18):DC(H9) DG(G19):DC(H8) DA(G20):DT(H7) chainA chainB ( 17) ASN17 0 0 0 1 1 2 0 0 0 0 0 0 prot.sequence rgshmmfvhiadnhlgyrqynlddrekdiydsfklcikkileikpdvvlhsgdlfndlrppvkalriamqafkklhennikvyivagnhemprrlgeesplallkdyvkildgkdvinvngeeificgtyyhkkskreemldklknfeseaknykkkilmlhqginpyipldyelehfdlpkfsyyalghihkrilerfndgilaysgsteiiyrneyedykkegkgfylvdfsgndldisdiekidiecrefvevnikdkksfneavnkiercknkpvvfgkikrefkpwfdtlkdkilinkaiivddefidmpdn/mmfvhiadnhlgyrqyNlddrekdiydsfklcikkileikpdvvlhsgdlfndlrppvkalriamqafkklhennikvyivagnhemprrlgeesplallkdyvkildgkdvinvngeeificgtyyhkkskreemldklknfeseaknykkkilmlhqginpyipldyelehfdlpkfsyyalghihkrilerfndgilaysgsteiiyrneyedykkegkgfylvdfsgndldisdiekidiecrefvevnikdkksfneavnkiercknkpvvfgkikrefkpwfdtlkdkilinkaiivdde >4tup_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH GG AS THE TEMPLATE (GG0B) IN A 1-NUCLEOTIDE GAPPED DNA organism=HOMO SAPIENS DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DC(T3):DG(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 36 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 5 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskdekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4tuq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA INSERTING DCMPNPP OPPOSITE GG TEMPLATE (GG0B). organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DG(D3):DC(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 35 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4tur_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA INSERTING DCMPNPP OPPOSITE THE 5'G OF CISPLATIN CROSSLINKED GS (PT-GG2) organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DG(D3):DC(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 35 0 0 0 0 ( 29) LYS35 8 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4tus_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA INSERTING DCMPNPP OPPOSITE THE 5'G OF CISPLATIN CROSSLINKED GS (PT-GG2) WITH MANGANESE IN THE ACTIVE SITE. organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DG(D3):DC(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 38 0 0 0 0 ( 26) LYS35 7 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpsknekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4u0y_ABCD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAINS OF YVOA IN COMPLEX WITH PALINDROMIC OPERATOR DNA organism=Bacillus subtilis subsp. subtilis str. 168 DNA sequence DG(E1):DC(F14) DT(E2):DA(F13) DG(E3):DC(F12) DG(E4):DC(F11) DT(E5):DA(F10) DC(E6):DG(F9) DT(E7):DA(F8) DA(E8):DT(F7) DG(E9):DC(F6) DA(E10):DT(F5) DC(E11):DG(F4) DC(E12):DG(F3) DA(E13):DT(F2) DC(E14):DG(F1) chainA ( 37) GLU37 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 47) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 48) ARG48 0 0 0 0 0 0 0 0 0 0 2 2 10 9 ( 49) MET49 0 0 0 0 0 0 0 0 0 0 0 0 0 5 chainB ( 38) ARG38 0 0 0 0 0 0 0 0 0 0 2 11 8 0 ( 47) SER47 0 0 0 0 0 0 7 4 0 0 0 0 0 0 ( 48) ARG48 0 0 0 0 0 0 0 0 0 4 12 8 0 0 ( 49) MET49 0 0 0 0 0 0 1 1 5 1 0 0 0 0 ( 50) THR50 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 52) ARG52 0 0 0 0 0 0 0 0 0 5 2 0 0 0 chainC ( 37) GLU37 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 47) SER47 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG48 8 9 2 2 0 0 0 0 0 0 0 0 0 0 ( 49) MET49 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 37) ARG38 0 8 11 2 0 0 0 0 0 0 0 0 0 0 ( 46) SER47 0 0 0 0 0 0 4 7 0 0 0 0 0 0 ( 47) ARG48 0 0 8 12 3 0 0 0 0 0 0 0 0 0 ( 48) MET49 0 0 0 0 1 5 1 1 0 0 0 0 0 0 ( 49) THR50 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 51) ARG52 0 0 0 1 5 0 0 0 0 0 0 0 0 0 prot.sequence mninkqspipiyyqimeqlktqikngelqpdmplpsEreyaeqfgiSRMtvrqalsnlvnegllyrlkgrgtfvs/mninkqspipiyyqimeqlktqikngelqpdmplpseReyaeqfgiSRMTvRqalsnlvnegllyrlkgrgtfvs/mninkqspipiyyqimeqlktqikngelqpdmplpsEreyaeqfgiSRMtvrqalsnlvnegllyrlkgrgtfvs/ninkqspipiyyqimeqlktqikngelqpdmplpseReyaeqfgiSRMTvRqalsnlvnegllyrlkgrgtfvs >4u0y_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAINS OF YVOA IN COMPLEX WITH PALINDROMIC OPERATOR DNA organism=Bacillus subtilis subsp. subtilis str. 168 DNA sequence DG(F1):DC(E14) DT(F2):DA(E13) DG(F3):DC(E12) DG(F4):DC(E11) DT(F5):DA(E10) DC(F6):DG(E9) DT(F7):DA(E8) DA(F8):DT(E7) DG(F9):DC(E6) DA(F10):DT(E5) DC(F11):DG(E4) DC(F12):DG(E3) DA(F13):DT(E2) DC(F14):DG(E1) chainB ( 38) ARG38 0 8 11 2 0 0 0 0 0 0 0 0 0 0 ( 47) SER47 0 0 0 0 0 0 4 7 0 0 0 0 0 0 ( 48) ARG48 0 0 8 12 4 0 0 0 0 0 0 0 0 0 ( 49) MET49 0 0 0 0 1 5 1 1 0 0 0 0 0 0 ( 50) THR50 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 52) ARG52 0 0 0 2 5 0 0 0 0 0 0 0 0 0 prot.sequence mninkqspipiyyqimeqlktqikngelqpdmplpseReyaeqfgiSRMTvRqalsnlvnegllyrlkgrgtfvs >4u6p_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURAL MECHANISM OF ERROR-FREE BYPASS OF MAJOR BENZO[A]PYRENE ADDUCT BY HUMAN POLYMERASE KAPPA organism=Homo sapiens DNA sequence DG(P5):DC(T14) DC(P6):DG(T13) DG(P7):DC(T12) DG(P8):DC(T11) DA(P9):DT(T10) DT(P10):DA(T9) DC(P11):DG(T8) DA(P12):DT(T7) DC(P13):DG(T6) DCT(B605):DG(T5) chainB ( 77) ASP107 0 0 0 0 0 0 0 0 0 4 ( 80) ALA110 0 0 0 0 0 0 0 0 0 2 (105) MET135 0 0 0 0 0 0 0 0 0 9 (108) THR138 0 0 0 0 0 0 0 0 0 5 (111) TYR141 0 0 0 0 0 0 0 0 0 4 (114) ARG144 0 0 0 0 0 0 0 0 0 15 (120) ALA150 0 0 0 0 0 0 0 0 0 2 (121) ALA151 0 0 0 0 0 0 0 0 0 3 (168) ASP198 0 0 0 0 0 0 0 0 0 2 (169) GLU199 0 0 0 0 0 0 0 0 0 1 (241) LYS328 0 0 0 0 0 0 0 0 0 8 (332) GLU419 0 0 0 0 0 0 0 3 0 0 (372) LYS459 0 0 0 0 0 0 0 1 0 0 prot.sequence ldkekinkiimeatkgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsMlstsnyharrfgvraAmpgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfiknsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthltrdgerksmsvErtfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiKlknvnfevkTrastvssvvstaeeifaiakellkteidadfphplrlrlmgvrissfpn >4u7b_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A PRE-CLEAVAGE MOS1 TRANSPOSOSOME organism=Drosophila mauritiana DNA sequence DG(E4):DC(F53) DG(E5):DC(F52) DT(E6):DA(F51) DG(E7):DC(F50) DT(E8):DA(F49) DA(E9):DT(F48) DC(E10):DG(F47) DA(E11):DT(F46) DA(E12):DT(F45) DG(E13):DC(F44) DT(E14):DA(F43) DA(E15):DT(F42) DT(E16):DA(F41) DG(E17):DC(F40) DA(E18):DT(F39) DA(E19):DT(F38) DA(E20):DT(F37) DT(E21):DA(F36) DG(E22):DC(F35) DT(E23):DA(F34) DC(E24):DG(F33) DG(E25):DC(F32) DT(E26):DA(F31) DT(E27):DA(F30) DT(E28):DA(F29) chainB ( 41) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 9 3 0 0 0 ( 44) GLU47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 ( 45) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 14 2 0 0 0 0 0 ( 62) HIS65 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 ( 64) LYS67 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) PRO68 0 0 0 0 0 0 0 0 0 0 1 5 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) SER99 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) GLN100 0 0 0 0 13 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) GLN101 0 0 0 0 0 6 10 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ALA102 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) SER104 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fvpnkeqtrtvlifcfhlkktaaeshrmlveafgeqvptvKtcERwfqrfksgdfdvddkeHgKPpkryedaelqalldeddaqtqkqlaeqlevSQQAvSnrlremgkiqkvgrwvphelnerqmerrkntceillsrykrksflhrivtgdekwiffvnpkrkksyvdpgqpatstarpnrfgkktmlcvwwdqsgviyyellkpgetvnaaryqqqlinlnralqrkrpeyqkrqhrviflhanapshtaravrdtletlnwevlphaayspdlapsdyhlfasmghalaeqrfdsyesvkkwldewfaakddefywrgihklperwekcvasdgkyfe >4u7c_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF DNA POLYMERASE KAPPA IN COMPLEX WITH BENZOPYRENE ADDUCTED DNA organism=Homo sapiens DNA sequence DC(D6):DG(C13) DT(D7):DA(C12) DG(D8):DC(C11) DA(D9):DT(C10) DT(D10):DA(C9) DC(D11):DG(C8) DC(D12):DG(C7) DG(D13):DC(C6) DC(D14):DG(C5) chainA (332) GLU419 0 3 0 0 0 0 0 0 0 (372) LYS459 0 1 0 0 0 0 0 0 0 (425) ARG512 0 0 2 2 2 0 0 0 0 prot.sequence dkekinkiimeatkgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsmlstsnyharrfgvraampgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfikqnsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthltrdgerksmsvErtfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiKlknvnfevktrastvssvvstaeeifaiakellkteidadfphplrlrlmgvRissfpn >4uaw_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH A TEMPLATING ADENINE AND INCOMING 8-OXODGTP, 0 S organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 35 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4uay_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA PRODUCT COMPLEX WITH A TEMPLATING ADENINE AND INSERTED 8-OXODGMP, 40 S organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 35 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4uaz_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA REACTANT COMPLEX WITH A TEMPLATING ADENINE AND INCOMING 8-OXODGTP, 20 S organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 35 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgtgvageplpvdsekdifdyiqwkyrepkdrse >4ub1_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA PRODUCT COMPLEX WITH A TEMPLATING ADENINE AND 8- OXODGMP, 90 S organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 23) HIS34 44 0 0 0 0 ( 24) LYS35 9 0 0 0 0 ( 27) ALA38 3 0 0 0 0 prot.sequence nggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkd >4ub2_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA PRODUCT COMPLEX WITH A TEMPLATING CYTOSINE AND 8- OXODGMP, 120 S organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 24) HIS34 41 0 0 0 0 ( 25) LYS35 8 0 0 0 0 ( 28) ALA38 4 0 0 0 0 prot.sequence lnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpsknkeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplggvageplpvdsekdifdyiqwkyrepkdrse >4ub3_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA CLOSED PRODUCT COMPLEX WITH A TEMPLATING CYTOSINE AND 8-OXODGMP, 60 S organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) 8OG(P11):DC(T6) chainA (224) LYS234 0 0 0 0 0 0 0 5 0 0 0 (261) TYR271 0 0 0 0 0 0 0 0 0 9 7 (266) ASP276 0 0 0 0 0 0 0 0 0 0 9 (269) ASN279 0 0 0 0 0 0 0 0 0 0 10 (270) LYS280 0 0 0 0 0 0 0 0 0 0 15 (273) ARG283 0 0 0 0 0 0 0 0 0 4 13 prot.sequence lnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsdifnKnmRahalekgftinEytirpltgvageplpvdsekdifdyiqwkyrepkdrse >4ub4_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH A TEMPLATING CYTOSINE AND INCOMING DGTP, 0 S organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 36 ( 26) LYS35 0 0 0 0 5 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4ub5_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH A TEMPLATING CYTOSINE, INCOMING 8-OXODGTP, AND MN2+, 5 S organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 34 ( 26) LYS35 0 0 0 0 7 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrKaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpseyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirpgeplpvdsekdifdyiqwkyrepkdrse >4ubb_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA REACTANT COMPLEX WITH A TEMPLATING CYTOSINE AND INCOMING 8-OXODGTP, 40 S organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 29 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4ubc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH A TEMPLATING CYTOSINE AND INCOMING 8-OXODGTP, 0 S organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 36 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4umk_D:KorB_DNA-binding_domain-like;ParB/Sulfiredoxin; title=THE COMPLEX OF SPO0J AND PARS DNA IN CHROMOSOMAL PARTITION SYSTEM organism=HELICOBACTER PYLORI DNA sequence DT(Y1):DA(Z24) DC(Y2):DG(Z23) DC(Y3):DG(Z22) DC(Y4):DG(Z21) DT(Y5):DA(Z20) DG(Y6):DC(Z19) DT(Y7):DA(Z18) DT(Y8):DA(Z17) DT(Y9):DA(Z16) DC(Y10):DG(Z15) DA(Y11):DT(Z14) DC(Y12):DG(Z13) DG(Y13):DC(Z12) DT(Y14):DA(Z11) DG(Y15):DC(Z10) DG(Y16):DC(Z9) DA(Y17):DT(Z8) DA(Y18):DT(Z7) DC(Y19):DG(Z6) DA(Y20):DT(Z5) DC(Y21):DG(Z4) DC(Y22):DG(Z3) DC(Y23):DG(Z2) DT(Y24):DA(Z1) chainD ( 99) GLU149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (108) SER158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (109) ARG159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 28 0 0 0 0 (110) ALA160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 (113) ALA163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (114) ASN164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 3 0 0 0 0 0 0 (117) ARG167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 (140) LYS190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 0 0 0 (164) VAL214 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 (165) ARG215 0 0 0 0 0 0 0 0 0 0 0 0 6 12 10 0 0 0 0 0 0 0 0 0 (168) GLU218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 prot.sequence vfsedsleelaqsikehgllqpvlvvsengryhliagerrlrasklakmptikaivvdieqekmrevalieniqredlnplelarsykellesyqmtqEelskivkkSRAhvANimRlltlsskvqnalleekitsghaKvlvgldgekqelilnsiigqklsVRqtEdlardfki >4umm_AE:Glucocorticoid_receptor-like_DNA-binding_domain;Nuclear_receptor_ligand-binding_domain; title=THE CRYO-EM STRUCTURE OF THE PALINDROMIC DNA-BOUND USP-ECR NUCLEAR RECEPTOR REVEALS AN ASYMMETRIC ORGANIZATION WITH ALLOSTERIC DOMAIN POSITIONING organism=HELIOTHIS VIRESCENS DNA sequence DA(D2):DT(C20) DC(D3):DG(C19) DA(D4):DT(C18) DA(D5):DT(C17) DG(D6):DC(C16) DT(D7):DA(C15) DG(D8):DC(C14) DC(D9):DG(C13) DA(D10):DT(C12) DT(D11):DA(C11) DT(D12):DA(C10) DG(D13):DC(C9) DA(D14):DT(C8) DA(D15):DT(C7) DC(D16):DG(C6) DC(D17):DG(C5) DC(D18):DG(C4) DT(D19):DA(C3) DT(D20):DA(C2) chainA ( 22) GLU131 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 ( 25) LYS134 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 ( 29) LYS138 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 ( 30) ARG139 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 ( 78) ARG187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 chainE ( 25) GLU165 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS168 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG172 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG173 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 ( 57) ARG197 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence khlcsicgdrasgkhygvyscEgcKgffKRtvrkdltyacreernciidkrqrnrcqycryqkclacgmkreavqeeR/rqqeelclvcgdrasgyhynaltcEgcKgffRRsvtknavyickfghacemdmymrRkcqecrlkkclavgmrpecvvpenqcamkr >4umm_E:Glucocorticoid_receptor-like_DNA-binding_domain; title=THE CRYO-EM STRUCTURE OF THE PALINDROMIC DNA-BOUND USP-ECR NUCLEAR RECEPTOR REVEALS AN ASYMMETRIC ORGANIZATION WITH ALLOSTERIC DOMAIN POSITIONING organism=HELIOTHIS VIRESCENS DNA sequence DA(D2):DT(C20) DC(D3):DG(C19) DA(D4):DT(C18) DA(D5):DT(C17) DG(D6):DC(C16) DT(D7):DA(C15) DG(D8):DC(C14) DC(D9):DG(C13) DA(D10):DT(C12) DT(D11):DA(C11) DT(D12):DA(C10) DG(D13):DC(C9) DA(D14):DT(C8) DA(D15):DT(C7) DC(D16):DG(C6) DC(D17):DG(C5) DC(D18):DG(C4) DT(D19):DA(C3) DT(D20):DA(C2) chainE ( 25) GLU165 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS168 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG172 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG173 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 ( 57) ARG197 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence rqqeelclvcgdrasgyhynaltcEgcKgffRRsvtknavyickfghacemdmymrRkcqecrlkkclavgmrpecvvpenqcamkr >4un3_B: title=CRYSTAL STRUCTURE OF CAS9 BOUND TO PAM-CONTAINING DNA TARGET organism=STREPTOCOCCUS PYOGENES DNA sequence DT(D5):DA(C8) DG(D6):DC(C7) DG(D7):DC(C6) DT(D8):DA(C5) DA(D9):DT(C4) DT(D10):DA(C3) DT(D11):DA(C2) DG(D12):DC(C1) chainB (1060) LYS1107 2 5 0 0 0 0 0 0 (1172) GLU1219 0 2 0 0 0 0 0 0 (1275) ARG1333 15 10 2 0 0 0 0 0 (1277) ARG1335 0 14 13 2 0 0 0 0 prot.sequence kysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarnsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdgkatakyffysnimnffkteikrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylasheqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsq >4un7_G:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA BEFORE INCUBATION IN 5MM MN (STATE 1) organism=? DNA sequence DG(H1):DC(I25) DC(H2):DG(I24) DC(H3):DG(I23) DT(H4):DA(I22) DT(H5):DA(I21) DG(H6):DC(I20) DC(H7):DG(I19) DC(H8):DG(I18) DG(H9):DC(I17) DG(H10):DC(I16) DG(H11):DC(I15) DT(H12):DA(I14) DA(H13):DT(I13) DA(H14):DT(I12) DG(H15):DC(I11) DT(H16):DA(I10) DT(H17):DA(I9) DC(H18):DG(I8) DC(H19):DG(I7) DG(H20):DC(I6) DG(H21):DC(I5) DC(H22):DG(I4) DG(H23):DC(I3) DC(H24):DG(I2) DG(H25):DC(I1) chainG ( 21) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 25) TYR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 5 2 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 14 16 5 0 0 ( 30) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 31) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 5 0 0 0 0 ( 33) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 6 1 0 0 0 0 0 ( 35) VAL39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 37) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 68) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 71) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 ( 72) THR76 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 9 18 7 1 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 3 0 0 0 0 0 0 ( 79) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (120) ARG124 0 0 0 0 1 9 13 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG126 0 0 0 0 0 0 1 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TRP128 0 0 0 0 0 0 0 0 5 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ASP154 0 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ASP155 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG157 0 0 0 0 0 0 0 0 10 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) HIS158 0 0 0 0 0 0 0 0 0 0 3 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) VAL160 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU167 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eevsgisayllgliigdgglYkLkYkgnRSEyRvViTqksenlikqhiaplmqflidelnvkskiQiVkgDTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnisLrdrikfvhtilssh >4un8_D:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 1H INCUBATION IN 5MM MN (STATE 2) organism=DESULFUROCOCCUS MOBILIS DNA sequence DG(E1):DC(F25) DC(E2):DG(F24) DC(E3):DG(F23) DT(E4):DA(F22) DT(E5):DA(F21) DG(E6):DC(F20) DC(E7):DG(F19) DC(E8):DG(F18) DG(E9):DC(F17) DG(E10):DC(F16) DG(E11):DC(F15) DT(E12):DA(F14) DA(E13):DT(F13) DA(E14):DT(F12) DG(E15):DC(F11) DT(E16):DA(F10) DT(E17):DA(F9) DC(E18):DG(F8) DC(E19):DG(F7) DG(E20):DC(F6) DG(E21):DC(F5) DC(E22):DG(F4) DG(E23):DC(F3) DC(E24):DG(F2) DG(E25):DC(F1) chainD ( 21) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 25) TYR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 4 1 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 11 5 0 0 ( 30) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 31) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 3 0 0 0 0 ( 33) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 6 1 0 0 0 0 0 ( 35) VAL39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 37) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 68) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 71) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 ( 72) THR76 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 7 21 7 2 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 7 0 0 0 0 0 0 ( 79) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 (120) ARG124 0 0 0 0 4 9 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG126 0 0 0 0 0 0 2 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TRP128 0 0 0 0 0 0 0 0 5 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ASP154 0 0 0 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ASP155 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG157 0 0 0 0 0 0 0 0 16 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) HIS158 0 0 0 0 0 0 0 0 0 0 3 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) VAL160 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU167 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence envsgisayllgliigdgglYkLkYkgnRSEyRvViTqksenlikqhiaplmqflidelnvkskiQiVkgDTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnisLrdrikfvhtilsshlnplppeaaalehh >4un9_A:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 8H INCUBATION IN 5MM MN (STATE 3) organism=? DNA sequence DC(C1):DG(B25) DG(C2):DC(B24) DC(C3):DG(B23) DG(C4):DC(B22) DC(C5):DG(B21) DC(C6):DG(B20) DG(C7):DC(B19) DG(C8):DC(B18) DA(C9):DT(B17) DA(C10):DT(B16) DC(C11):DG(B15) DT(C12):DA(B14) DT(C13):DA(B13) DA(C14):DT(B12) DC(C15):DG(B11) DC(C16):DG(B10) DC(C17):DG(B9) DG(C18):DC(B8) DG(C19):DC(B7) DC(C20):DG(B6) DA(C21):DT(B5) DA(C22):DT(B4) DG(C23):DC(B3) DG(C24):DC(B2) DC(C25):DG(B1) chainA ( 22) TYR25 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LEU27 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) TYR29 0 0 0 0 2 5 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG33 0 0 7 14 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER34 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) GLU35 0 0 0 0 9 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG37 0 0 0 0 0 1 6 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR41 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) GLN70 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) VAL72 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASP75 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR76 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG77 0 0 0 0 0 0 0 0 5 7 15 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) GLU79 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG81 0 0 0 0 0 0 2 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) SER83 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 6 3 0 0 0 0 (123) ARG126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 1 0 0 0 0 0 0 (125) TRP128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 3 0 0 0 0 0 0 0 0 (151) ASP154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 9 1 0 0 0 0 0 0 (152) ASP155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (154) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 18 0 0 0 0 0 0 0 0 (155) HIS158 0 0 0 0 0 0 0 0 0 0 0 0 0 12 3 0 0 0 0 0 0 0 0 0 0 (157) VAL160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (164) LEU167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence nenvsgisayllgliigdgglYkLkYkgnRSEyRvviTqksenlikqhiaplmqflidelnvkskiQiVkgDTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnisLrdrikfvhtilsshlnplpp >4una_A:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 2 DAYS INCUBATION IN 5MM MN (STATE 4) organism=DESULFUROCOCCUS MOBILIS DNA sequence DG(B1):DC(K25) DC(B2):DG(K24) DC(B3):DG(K23) DT(B4):DA(K22) DT(B5):DA(K21) DG(B6):DC(K20) DC(B7):DG(K19) DC(B8):DG(K18) DG(B9):DC(K17) DG(B10):DC(K16) DG(B11):DC(C15) DT(B12):DA(C14) DA(B13):DT(C13) DA(B14):DT(C12) DG(B15):DC(C11) DT(B16):DA(C10) DT(B17):DA(C9) DC(B18):DG(C8) DC(B19):DG(C7) DG(B20):DC(C6) DG(B21):DC(C5) DC(B22):DG(C4) DG(B23):DC(C3) DC(B24):DG(C2) DG(B25):DC(C1) chainA ( 22) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 ( 24) LEU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 26) TYR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 5 2 0 0 0 0 ( 29) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 30) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 16 5 0 0 ( 31) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 32) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 5 0 0 0 0 ( 34) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 6 0 0 0 0 0 0 ( 38) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 67) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 69) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 72) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 ( 73) THR76 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 11 18 2 0 0 0 0 0 0 0 0 0 ( 76) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 78) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 5 0 0 0 0 0 0 ( 80) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (121) ARG124 0 0 0 0 3 8 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ARG126 0 0 0 0 0 0 1 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) TRP128 0 0 0 0 0 0 0 0 5 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ASP154 0 0 0 0 0 0 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) ASP155 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ARG157 0 0 0 0 0 0 0 0 18 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) HIS158 0 0 0 0 0 0 0 0 0 0 3 13 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) VAL160 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) LEU167 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nenvsgisayllgliigdgglYkLkYkgNRSEyRvviTqksenlikqhiaplmqflidelnvkskiQiVkgDTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnisLrdrikfvhtilsshlnplpp >4unb_G:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 6 DAYS INCUBATION IN 5MM MN (STATE 5) organism=DESULFUROCOCCUS MOBILIS DNA sequence DG(H1):DC(O25) DC(H2):DG(O24) DC(H3):DG(O23) DT(H4):DA(O22) DT(H5):DA(O21) DG(H6):DC(O20) DC(H7):DG(O19) DC(H8):DG(O18) DG(H9):DC(O17) DG(H10):DC(O16) DG(H11):DC(I15) DT(H12):DA(I14) DA(H13):DT(I13) DA(H14):DT(I12) DG(N15):DC(I11) DT(N16):DA(I10) DT(N17):DA(I9) DC(N18):DG(I8) DC(N19):DG(I7) DG(N20):DC(I6) DG(N21):DC(I5) DC(N22):DG(I4) DG(N23):DC(I3) DC(N24):DG(I2) DG(N25):DC(I1) chainG ( 21) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 25) TYR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 5 2 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 13 7 0 0 ( 30) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 31) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 4 0 0 0 0 ( 33) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 6 1 0 0 0 0 0 ( 37) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 ( 68) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 72) THR76 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 8 18 7 2 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 4 0 0 0 0 0 0 ( 79) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (120) ARG124 0 0 0 0 2 10 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG126 0 0 0 0 0 0 1 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TRP128 0 0 0 0 0 0 0 0 8 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ASP154 0 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ASP155 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG157 0 0 0 0 0 0 0 0 17 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) HIS158 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) VAL160 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU167 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence envsgisayllgliigdgglYkLkYkgnRSEyRvviTqksenlikqhiaplmqflidelnvkskiQiVkgdTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnisLrdrikfvhtils >4unc_G:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 8 DAYS INCUBATION IN 5MM MN (STATE 6) organism=DESULFUROCOCCUS MOBILIS DNA sequence DG(H1):DC(O25) DC(H2):DG(O24) DC(H3):DG(O23) DT(H4):DA(O22) DT(H5):DA(O21) DG(H6):DC(O20) DC(H7):DG(O19) DC(H8):DG(O18) DG(H9):DC(O17) DG(H10):DC(O16) DG(H11):DC(I15) DT(H12):DA(I14) DA(H13):DT(I13) DA(H14):DT(I12) DG(N15):DC(I11) DT(N16):DA(I10) DT(N17):DA(I9) DC(N18):DG(I8) DC(N19):DG(I7) DG(N20):DC(I6) DG(N21):DC(I5) DC(N22):DG(I4) DG(N23):DC(I3) DC(N24):DG(I2) DG(N25):DC(I1) chainG ( 21) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 25) TYR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 3 2 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 15 17 5 0 0 ( 30) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 31) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 4 0 0 0 0 ( 33) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 6 1 0 0 0 0 0 ( 35) VAL39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 37) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 68) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 72) THR76 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 5 0 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 5 0 0 0 0 0 0 ( 79) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (120) ARG124 0 0 0 0 11 8 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG126 0 0 0 0 0 0 1 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TRP128 0 0 0 0 0 0 0 0 3 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ASP154 0 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ASP155 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG157 0 0 0 0 0 0 0 0 16 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) HIS158 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) VAL160 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence envsgisayllgliigdgglYkLkYkgnRSEyRvViTqksenlikqhiaplmqflidelnvkskiQiVkgdTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnislrdrikfvhtilss >4uno_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ETS DOMAIN OF HUMAN ETV5 IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DA(B1):DT(C9) DC(B2):DG(C8) DC(B3):DG(C7) DG(B4):DC(C6) DG(B5):DC(C5) DA(B6):DT(C4) DA(B7):DT(C3) DG(B8):DC(C2) DT(B9):DA(C1) chainA ( 54) ASP420 0 0 1 6 1 0 0 0 0 ( 55) LYS421 0 0 0 0 0 5 0 0 0 ( 58) ARG424 0 0 0 21 16 9 1 0 0 ( 59) SER425 0 0 0 0 0 0 1 0 0 ( 61) ARG427 0 0 14 13 0 0 0 0 0 ( 62) TYR428 0 0 0 0 0 0 0 5 1 prot.sequence slqlwqflvtllddpanahfiawtgrgmefkliepeevarrwgiqknrpamnyDKlsRSlRYyyekgimqkvageryvykfvcdpdalfsmafpd >4uqg_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=A NEW BIO-ISOSTERIC BASE PAIR BASED ON REVERSIBLE BONDING organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DA(C4):DT(B29) DG(C5):DC(B28) DG(C6):DC(B27) DG(C7):DC(B26) DA(C8):DT(B25) SAY(C9):T0T(B24) DG(C10):DC(B23) DG(C11):DC(B22) DT(C12):DA(B21) DC(C13):DG(B20) chainA (285) LYS582 0 0 0 5 2 0 0 0 0 0 (318) ARG615 7 4 0 0 0 0 0 0 0 0 (325) ASN622 0 0 1 0 0 0 0 0 0 0 (328) ASN625 0 1 7 3 0 0 0 0 0 0 (417) TYR714 52 0 0 0 0 0 0 0 0 0 (500) GLN797 3 1 0 0 0 0 0 0 0 0 (532) HIS829 0 2 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkksktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4uqm_A:Uracil-DNA_glycosylase-like; title=CRYSTAL STRUCTURE DETERMINATION OF URACIL-DNA N-GLYCOSYLASE (UNG) FROM DEINOCOCCUS RADIODURANS IN COMPLEX WITH DNA - NEW INSIGHTS INTO THE ROLE OF THE LEUCINE-LOOP FOR DAMAGE RECOGNITION AND REPAIR organism=DEINOCOCCUS RADIODURANS DNA sequence DT(B5):DA(C13) DC(B6):DG(C12) DC(B7):DG(C11) DA(B8):DT(C10) AAB(B9):DA(C9) DG(B10):DC(C8) DT(B11):DA(C7) DC(B12):DG(C6) DT(B13):DA(C5) DC(B14):DG(C4) DC(B15):DG(C3) chainA (194) PRO209 0 0 0 12 0 0 0 0 0 0 0 (195) LEU210 0 0 0 34 7 11 0 0 0 0 0 prot.sequence rpiipanlpedwqeallpefsapyfheltdflrqerkeytiyppapdvfnalrytplgevkvlilgqdpyhgpnqahglsfsvrpgvrvppslrniykeltedipgfvapkhgylrswaeqgvlllnavltvraaqanshqgkgwehftdavikavnakeervvfilwgsyarkkkklitgknhvviesghpsPLseqYffgtrpfsktnealekagrgpvewqlpatv >4usg_AB:ssDNA-binding_transcriptional_regulator_domain; title=CRYSTAL STRUCTURE OF PC4 W89Y MUTANT COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DT(C21) DT(C20) DT(C19) DT(C18) DT(C17) DT(C5) DT(C6) DT(C7) DT(C8) DT(C9) DT(C10) DT(C15):DT(C17) DT(C16) chainA ( 7) LYS68 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) MET69 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) SER73 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 14) ARG75 0 0 0 0 0 0 0 4 12 0 0 0 0 ( 16) PHE77 0 0 0 0 0 0 0 0 36 2 0 0 0 ( 19) LYS80 0 0 0 0 0 0 0 0 0 14 0 0 0 ( 21) LEU82 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 23) ASP84 0 0 0 0 0 0 0 7 0 0 0 0 0 ( 25) ARG86 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 27) TYR88 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) TYR89 0 0 0 0 0 0 49 0 0 0 0 0 0 ( 37) PRO98 0 0 0 0 0 0 0 11 0 0 0 0 0 ( 39) ARG100 0 0 0 0 0 15 3 0 0 0 0 0 0 chainB ( 14) ARG75 0 0 6 3 0 0 0 0 0 0 0 0 0 ( 16) PHE77 0 2 13 0 0 0 0 0 0 0 0 0 0 ( 17) LYS78 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 19) LYS80 0 12 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU82 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 28) TYR89 0 0 0 0 46 0 0 0 0 0 0 46 0 ( 37) PRO98 0 0 0 8 0 0 0 0 0 0 0 0 0 ( 39) ARG100 0 0 0 0 2 0 0 0 0 0 0 2 0 ( 45) ASN106 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence amfQigKMryvSvRdFkgKvLiDiReYYmdpegemkPgRkgiSlNpeqwsqlkeqisdiddavrkl/amfqigkmryvsvRdFKgKvLidireyYmdpegemkPgRkgislNpeqwsQlkeqisdiddavrkl >4usg_B:ssDNA-binding_transcriptional_regulator_domain; title=CRYSTAL STRUCTURE OF PC4 W89Y MUTANT COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DT(C21) DT(C20) DT(C19) DT(C18) DT(C17) DT(C5) DT(C6) DT(C7) DT(C8) DT(C9) DT(C10) DT(C15):DT(C17) DT(C16) chainB ( 14) ARG75 0 0 6 3 0 0 0 0 0 0 0 0 0 ( 16) PHE77 0 2 13 0 0 0 0 0 0 0 0 0 0 ( 17) LYS78 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 19) LYS80 0 12 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU82 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 28) TYR89 0 0 0 0 46 0 0 0 0 0 0 46 0 ( 37) PRO98 0 0 0 8 0 0 0 0 0 0 0 0 0 ( 39) ARG100 0 0 0 0 2 0 0 0 0 0 0 2 0 ( 45) ASN106 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence amfqigkmryvsvRdFKgKvLidireyYmdpegemkPgRkgislNpeqwsQlkeqisdiddavrkl >4ut0_A:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 10 DAYS INCUBATION IN 5MM MN (STATE 7) organism=DESULFUROCOCCUS MOBILIS DNA sequence DG(B1):DC(E25) DC(B2):DG(E24) DC(B3):DG(E23) DT(B4):DA(E22) DT(B5):DA(E21) DG(B6):DC(E20) DC(B7):DG(E19) DC(B8):DG(E18) DG(B9):DC(E17) DG(B10):DC(E16) DG(B11):DC(D15) DT(B12):DA(D14) DA(B13):DT(D13) DA(B14):DT(D12) DG(C15):DC(D11) DT(C16):DA(D10) DT(C17):DA(D9) DC(C18):DG(D8) DC(C19):DG(D7) DG(C20):DC(D6) DG(C21):DC(D5) DC(C22):DG(D4) DG(C23):DC(D3) DC(C24):DG(D2) DG(C25):DC(D1) chainA ( 21) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 25) TYR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 6 2 0 0 0 0 ( 28) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 12 5 0 0 ( 30) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 31) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 5 0 0 0 0 ( 33) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 6 1 0 0 0 0 0 ( 35) VAL39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 37) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 68) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 72) THR76 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 8 18 6 1 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 4 0 0 0 0 0 0 ( 79) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (120) ARG124 0 0 0 0 8 9 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG126 0 0 0 0 0 0 1 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TRP128 0 0 0 0 0 0 0 0 3 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ASP154 0 0 0 0 0 0 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ASP155 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG157 0 0 0 0 0 0 0 0 18 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) HIS158 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) VAL160 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU167 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence envsgisayllgliigdgglYkLkYkgNRSEyRvViTqksenlikqhiaplmqflidelnvkskiQiVkgdTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnisLrdrikfvhtilsshlnplpp >4uus_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF A UBX-EXD-DNA COMPLEX INCLUDING THE UBDA MOTIF organism=? DNA sequence DG(D18):DC(C15) DT(D19):DA(C14) DG(D20):DC(C13) DA(D21):DT(C12) DT(D22):DA(C11) DT(D23):DA(C10) DT(D24):DA(C9) DA(D25):DT(C8) DT(D26):DA(C7) DG(D27):DC(C6) DG(D28):DC(C5) DC(D29):DG(C4) DG(D30):DC(C3) chainA ( 2) ARG5 0 0 0 0 7 10 6 0 0 0 0 0 0 ( 43) LYS46 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 44) ILE47 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 47) GLN50 0 0 0 0 0 0 0 0 0 1 10 6 0 ( 48) ASN51 0 0 0 0 0 0 8 11 0 0 0 0 0 ( 51) MET54 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence gRqtytryqtlelekefhtnhyltrrrriemahalslterqiKIwfQNrrMklkKeiqaikelneqe >4uus_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF A UBX-EXD-DNA COMPLEX INCLUDING THE UBDA MOTIF organism=DROSOPHILA MELANOGASTER DNA sequence DG(D18):DC(C15) DT(D19):DA(C14) DG(D20):DC(C13) DA(D21):DT(C12) DT(D22):DA(C11) DT(D23):DA(C10) DT(D24):DA(C9) DA(D25):DT(C8) DT(D26):DA(C7) DG(D27):DC(C6) DG(D28):DC(C5) DC(D29):DG(C4) DG(D30):DC(C3) chainA ( 2) ARG5 0 0 0 0 7 10 6 0 0 0 0 0 0 ( 43) LYS46 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 44) ILE47 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 47) GLN50 0 0 0 0 0 0 0 0 0 1 10 6 0 ( 48) ASN51 0 0 0 0 0 0 8 11 0 0 0 0 0 ( 51) MET54 0 0 0 0 0 0 0 0 0 2 0 0 0 chainB ( 44) ASN47 0 0 0 1 3 0 0 0 0 0 0 0 0 ( 48) ASN51 0 0 6 10 1 0 0 0 0 0 0 0 0 ( 51) ILE54 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 52) ARG55 0 11 11 7 0 0 0 0 0 0 0 0 0 prot.sequence gRqtytryqtlelekefhtnhyltrrrriemahalslterqiKIwfQNrrMklkKeiqaikelneqe/nfskqaseilneyfyshlsnpypseeakeelarkcgitvsqvsNwfgNkrIRykknigkaqeeanlyaa >4uus_EF:Homeodomain-like; title=CRYSTAL STRUCTURE OF A UBX-EXD-DNA COMPLEX INCLUDING THE UBDA MOTIF organism=DROSOPHILA MELANOGASTER DNA sequence DC(G3):DG(H30) DG(G4):DC(H29) DC(G5):DG(H28) DC(G6):DG(H27) DA(G7):DT(H26) DT(G8):DA(H25) DA(G9):DT(H24) DA(G10):DT(H23) DA(G11):DT(H22) DT(G12):DA(H21) DC(G13):DG(H20) DA(G14):DT(H19) DC(G15):DG(H18) chainE ( 2) ARG5 0 0 0 0 0 0 6 9 7 0 0 0 0 ( 44) ILE47 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 47) GLN50 0 0 9 9 0 0 0 0 0 0 0 0 0 ( 48) ASN51 0 0 0 0 0 12 8 0 0 0 0 0 0 ( 51) MET54 0 0 0 3 0 0 0 0 0 0 0 0 0 chainF ( 43) ASN47 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 47) ASN51 0 0 0 0 0 0 0 0 2 10 7 0 0 ( 51) ARG55 0 0 0 0 0 0 0 0 0 7 14 17 0 prot.sequence gRqtytryqtlelekefhtnhyltrrrriemahalslterqikIwfQNrrMklkkeiqaikelne/fskqaseilneyfyshlsnpypseeakeelarkcgitvsqvsNwfgNkriRykknigkaqeeanly >4uuv_AM:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE DNA BINDING ETS DOMAIN OF HUMAN ETV4 IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DA(C2):DT(B9) DC(C3):DG(B8) DT(C4):DA(B7) DT(C5):DA(B6) DC(C6):DG(B5) DC(C7):DG(B4) DG(C8):DC(B3) DG(C9):DC(B2) DT(C10):DA(B1) DA(N1):DT(O9) DC(N2):DG(O8) DC(N3):DG(O7) DG(N4):DC(O6) DG(N5):DC(O5) DA(N6):DT(O4) DA(N7):DT(O3) DG(N8):DC(O2) DT(N9):DA(O1) chainA ( 55) ASP393 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) LYS394 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG397 0 0 2 11 18 18 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) SER398 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG400 0 0 0 0 0 16 12 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR401 4 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 53) ASP393 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 ( 54) LYS394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 57) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 22 19 10 0 0 0 ( 58) SER398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 60) ARG400 0 0 0 0 0 0 0 0 0 0 0 14 15 0 0 0 0 0 ( 61) TYR401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 5 prot.sequence galqlwqflvallddptnahfiawtgrgmefkliepeevarlwgiqknrpamnyDKlsRSlRYyyekgimqkvageryvykfvcepdalfsmafpd/lqlwqflvallddptnahfiawtgrgmefkliepeevarlwgiqknrpamnyDKlsRSlRYyyekgimqkvageryvykfvcepdalfsmafpd >4uuv_D:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE DNA BINDING ETS DOMAIN OF HUMAN ETV4 IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DA(F1):DT(E9) DC(F2):DG(E8) DT(F3):DA(E7) DT(F4):DA(E6) DC(F5):DG(E5) DC(F6):DG(E4) DG(F7):DC(E3) DG(F8):DC(E2) DT(F9):DA(E1) DC(F10):DG(Q10) DA(R1):DT(Q9) DC(R2):DG(Q8) DT(R3):DA(Q7) DT(R4):DA(Q6) DC(R5):DG(Q5) DC(R6):DG(Q4) DG(R7):DC(Q3) DG(R8):DC(Q2) DT(R9):DA(Q1) chainD ( 54) ASP393 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) LYS394 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG397 0 0 1 11 15 23 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) SER398 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ARG400 0 0 0 0 0 12 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) TYR401 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alqlwqflvallddptnahfiawtgrgmefkliepeevarlwgiqknrpamnyDKlsRSlRYyyekgimqkvageryvykfvcepdalfsmafpd >4uuv_DP:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE DNA BINDING ETS DOMAIN OF HUMAN ETV4 IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DA(F1):DT(E9) DC(F2):DG(E8) DT(F3):DA(E7) DT(F4):DA(E6) DC(F5):DG(E5) DC(F6):DG(E4) DG(F7):DC(E3) DG(F8):DC(E2) DT(F9):DA(E1) DC(F10):DG(Q10) DA(R1):DT(Q9) DC(R2):DG(Q8) DT(R3):DA(Q7) DT(R4):DA(Q6) DC(R5):DG(Q5) DC(R6):DG(Q4) DG(R7):DC(Q3) DG(R8):DC(Q2) DT(R9):DA(Q1) chainD ( 54) ASP393 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) LYS394 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG397 0 0 1 11 15 23 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) SER398 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ARG400 0 0 0 0 0 12 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) TYR401 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 55) ASP393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 ( 56) LYS394 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 ( 59) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 1 10 16 23 0 0 0 ( 60) SER398 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 62) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 14 1 0 ( 63) TYR401 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 prot.sequence alqlwqflvallddptnahfiawtgrgmefkliepeevarlwgiqknrpamnyDKlsRSlRYyyekgimqkvageryvykfvcepdalfsmafpd/galqlwqflvallddptnahfiawtgrgmefkliepeevarlwgiqknrpamnyDKlsRSlRYyyekgimqkvageryvykfvcepdalfsmafpd >4uuv_GJ:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE DNA BINDING ETS DOMAIN OF HUMAN ETV4 IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DA(L1):DT(K9) DC(L2):DG(K8) DT(L3):DA(K7) DT(L4):DA(K6) DC(L5):DG(K5) DC(L6):DG(K4) DG(L7):DC(K3) DG(L8):DC(K2) DT(L9):DA(K1) DA(H1):DT(I9) DC(H2):DG(I8) DC(H3):DG(I7) DG(H4):DC(I6) DG(H5):DC(I5) DA(H6):DT(I4) DA(H7):DT(I3) DG(H8):DC(I2) DT(H9):DA(I1) chainG ( 54) ASP393 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 ( 55) LYS394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 58) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 22 17 11 1 0 0 ( 59) SER398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 61) ARG400 0 0 0 0 0 0 0 0 0 0 0 12 12 0 0 0 0 0 ( 62) TYR401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 5 chainJ ( 53) ASP393 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS394 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG397 0 0 1 10 17 20 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) SER398 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG400 0 0 0 0 0 13 15 0 0 0 0 0 0 0 0 0 0 0 ( 61) TYR401 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alqlwqflvallddptnahfiawtgrgmefkliepeevarlwgiqknrpamnyDKlsRSlRYyyekgimqkvageryvykfvcepdalfsmafpd/lqlwqflvallddptnahfiawtgrgmefkliepeevarlwgiqknrpamnyDKlsRSlRYyyekgimqkvageryvykfvcepdalfsmafpd >4uuv_SV:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE DNA BINDING ETS DOMAIN OF HUMAN ETV4 IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DA(W1):DT(X9) DC(W2):DG(X8) DC(W3):DG(X7) DG(W4):DC(X6) DG(W5):DC(X5) DA(W6):DT(X4) DA(W7):DT(X3) DG(W8):DC(X2) DT(W9):DA(X1) DG(W10):DC(U10) DA(T1):DT(U9) DC(T2):DG(U8) DC(T3):DG(U7) DG(T4):DC(U6) DG(T5):DC(U5) DA(T6):DT(U4) DA(T7):DT(U3) DG(T8):DC(U2) DT(T9):DA(U1) chainS ( 54) ASP393 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 ( 55) LYS394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 58) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 18 16 10 1 0 0 ( 59) SER398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 61) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 13 13 0 0 0 0 0 ( 62) TYR401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 chainV ( 53) ASP393 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS394 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG397 0 0 0 24 19 10 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) SER398 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG400 0 1 13 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) TYR401 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 prot.sequence alqlwqflvallddptnahfiawtgrgmefkliepeevarlwgiqknrpamnyDKlsRSlRYyyekgimqkvageryvykfvcepdalfsmafpd/lqlwqflvallddptnahfiawtgrgmefkliepeevarlwgiqknrpamnyDKlsRSlRYyyekgimqkvageryvykfvcepdalfsmafpd >4ux5_A:DNA-binding_domain_of_Mlu1-box_binding_protein_MBP1; title=STRUCTURE OF DNA COMPLEX OF PCG2 organism=MAGNAPORTHE ORYZAE DNA sequence DC(C1):DG(D14) DA(C2):DT(D13) DA(C3):DT(D12) DT(C4):DA(D11) DG(C5):DC(D10) DA(C6):DT(D9) DC(C7):DG(D8) DG(C8):DC(D7) DC(C9):DG(D6) DG(C10):DC(D5) DT(C11):DA(D4) DA(C12):DT(D3) DA(C13):DT(D2) DG(C14):DC(D1) chainA ( 47) LYS62 0 0 0 0 0 0 0 0 2 7 1 0 0 0 ( 48) PRO63 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 67) GLN82 0 0 0 0 0 0 0 0 6 10 0 0 0 0 ( 70) TYR85 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 74) GLN89 0 0 0 0 0 0 0 11 6 0 0 0 0 0 prot.sequence gpgiysatysgipvyeyqfglkehvmrrrvddwinathilkaagfdKPartrilerevqkdqhekvQggYgkyQgtwipleagealahrnnifdrlrpifefspgpdspppap >4ux5_AB:DNA-binding_domain_of_Mlu1-box_binding_protein_MBP1; title=STRUCTURE OF DNA COMPLEX OF PCG2 organism=MAGNAPORTHE ORYZAE DNA sequence DC(D1):DG(C14) DT(D2):DA(C13) DT(D3):DA(C12) DA(D4):DT(C11) DC(D5):DG(C10) DG(D6):DC(C9) DC(D7):DG(C8) DG(D8):DC(C7) DT(D9):DA(C6) DC(D10):DG(C5) DA(D11):DT(C4) DT(D12):DA(C3) DT(D13):DA(C2) DG(D14):DC(C1) chainA ( 47) LYS62 0 0 0 1 7 2 0 0 0 0 0 0 0 0 ( 48) PRO63 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) GLN82 0 0 0 0 10 6 0 0 0 0 0 0 0 0 ( 70) TYR85 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 74) GLN89 0 0 0 0 0 6 11 0 0 0 0 0 0 0 chainB ( 70) TYR85 0 0 0 7 2 0 0 0 0 0 0 0 0 0 ( 74) GLN89 0 0 0 0 1 5 0 0 0 0 0 0 0 0 prot.sequence gpgiysatysgipvyeyqfglkehvmrrrvddwinathilkaagfdKPartrilerevqkdqhekvQggYgkyQgtwipleagealahrnnifdrlrpifefspgpdspppap/gpgiysatysgipvyeyqfglkehvmrrrvddwinathilkaagfdkpartrilerevqkdqhekvqggYgkyQgtwipleagealahrnnifdrlrpifefspgpdspppap >4uzb_AB:Viral_DNA-binding_domain; title=KSHV LANA (ORF73) C-TERMINAL DOMAIN MUTANT BOUND TO LBS1 DNA (R1039Q, R1040Q, K1055E, K1109A, D1110A, A1121E, K1138S, K1140D, K1141D) organism=HUMAN HERPESVIRUS 8 DNA sequence DC(C2):DG(D-2) DC(C3):DG(D-3) DC(C4):DG(D-4) DG(C5):DC(D-5) DC(C6):DG(D-6) DC(C7):DG(D-7) DC(C8):DG(D-8) DG(C9):DC(D-9) DG(C10):DC(D-10) DG(C11):DC(D-11) DC(C12):DG(D-12) DA(C13):DT(D-13) DT(C14):DA(D-14) DG(C15):DC(D-15) DG(C16):DC(D-16) DG(C17):DC(D-17) DG(C18):DC(D-18) DC(C19):DG(D-19) DC(C20):DG(D-20) DG(C21):DC(D-21) chainA ( 3) PRO1012 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 ( 4) ARG1013 0 0 0 0 0 0 0 0 0 0 7 7 7 4 0 0 0 0 0 0 ( 21) LYS1030 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) TYR1066 0 0 0 0 4 17 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) LEU1128 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) HIS1011 0 0 0 0 0 0 0 6 14 2 0 0 0 0 0 0 0 0 0 0 ( 3) PRO1012 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 4) ARG1013 0 0 0 0 0 0 25 17 2 0 0 0 0 0 0 0 0 0 0 0 ( 21) LYS1030 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 prot.sequence phPRyqqppvpyrqiddcpaKarpqhifyqqflgkdgrrdpkcqwefavifwgndpYglkKlsqafqfggvkagpvsclphpgpdqspitycvyvycqnaatskkvqmarleweashpLagnlqssivsfddplplt/pHPRYqqppvpyrqiddcpaKarpqhifyqqflgkdgrrdpkcqwefavifwgndpyglkklsqafqfggvkagpvsclphpgpdqspitycvyvycqnaatskkvqmarleweashplagnlqssivsfddplplt >4uzb_B:Viral_DNA-binding_domain; title=KSHV LANA (ORF73) C-TERMINAL DOMAIN MUTANT BOUND TO LBS1 DNA (R1039Q, R1040Q, K1055E, K1109A, D1110A, A1121E, K1138S, K1140D, K1141D) organism=HUMAN HERPESVIRUS 8 DNA sequence DC(D-21):DG(C21) DG(D-20):DC(C20) DG(D-19):DC(C19) DC(D-18):DG(C18) DC(D-17):DG(C17) DC(D-16):DG(C16) DC(D-15):DG(C15) DA(D-14):DT(C14) DT(D-13):DA(C13) DG(D-12):DC(C12) DC(D-11):DG(C11) DC(D-10):DG(C10) DC(D-9):DG(C9) DG(D-8):DC(C8) DG(D-7):DC(C7) DG(D-6):DC(C6) DC(D-5):DG(C5) DG(D-4):DC(C4) DG(D-3):DC(C3) DG(D-2):DC(C2) chainB ( 2) HIS1011 0 0 0 0 0 0 0 0 0 0 2 14 6 0 0 0 0 0 0 0 ( 3) PRO1012 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 4) ARG1013 0 0 0 0 0 0 0 0 0 0 0 2 17 25 0 0 0 0 0 0 ( 21) LYS1030 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHPRYqqppvpyrqiddcpaKarpqhifyqqflgkdgrrdpkcqwefavifwgndpyglkklsqafqfggvkagpvsclphpgpdqspitycvyvycqnaatskkvqmarleweashplagnlqssivsfddplplt >4v1n_ABMO:TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon; title=ARCHITECTURE OF THE RNA POLYMERASE II-MEDIATOR CORE TRANSCRIPTION INITIATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N5):DT(T68) DA(N6):DT(T67) DC(N7):DG(T66) DA(N8):DT(T65) DG(N9):DC(T64) DT(N10):DA(T63) DA(N11):DT(T62) DG(N12):DC(T61) DC(N13):DG(T60) DA(N14):DT(T59) DC(N15):DG(T58) DG(N16):DC(T57) DC(N17):DG(T56) DT(N18):DA(T55) DG(N19):DC(T54) DT(N20):DA(T53) DG(N21):DC(T52) DT(N22):DA(T51) DA(N23):DT(T50) DT(N24):DA(T49) DA(N25):DT(T48) DT(N26):DA(T47) DA(N27):DT(T46) DA(N28):DT(T45) DT(N29):DA(T44) DA(N30):DT(T43) DG(N31):DC(T42) DT(N32):DA(T41) DG(N33):DC(T40) DT(N34):DA(T39) DG(N35):DC(T38) DT(N36):DA(T37) DT(N37):DA(T36) DG(N38):DC(T35) DT(N39):DA(T34) DA(N40):DT(T33) DC(N41):DT(T23) DA(N42):DT(T22) DG(N60):DT(T21) DC(N61):DA(T20) DA(N62):DT(T19) DC(N63):DA(T18) DA(N64):DG(T17) DA(N65):DT(T16) DC(N66):DA(T15) DT(N67):DT(T14) DG(N68):DC(T13) DC(N69):DG(T12) DG(N70):DT(T11) DC(N71):DG(T10) chainA (348) ARG350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (446) PRO448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (829) THR831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 (830) ALA832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (1353) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 chainB chainM ( 43) ARG64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ASP69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 19 0 0 0 0 0 0 0 0 0 0 0 0 (229) LYS272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) THR308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhttesdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidelkyelgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgymInrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveeahdfnmklainaktitsglkyalatgnwgeqkkamssragvSqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlRMkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf/ltcpeckvyppkiverfsegdvvcalcglvlsdklvdtrsewRtfsnDdhngddpsrvgeasnplldgnnlstrigkgettdmrftkelnkaqgknvkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktkefgktlnimkniaqnltyiprfcshlglpmqvttsaeytakkckeikeiagKspitiavvsiylnillfqipitaakvgqtlqvtegTiksgykilyehrdklvdpqliangvvsldnlpgv/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm >4v1n_O:TATA-box_binding_protein-like; title=ARCHITECTURE OF THE RNA POLYMERASE II-MEDIATOR CORE TRANSCRIPTION INITIATION COMPLEX organism=? DNA sequence DG(T10):DC(N71) DT(T11):DG(N70) DG(T12):DC(N69) DC(T13):DG(N68) DT(T14):DT(N67) DA(T15):DC(N66) DT(T16):DA(N65) DG(T17):DA(N64) DA(T18):DC(N63) DT(T19):DA(N62) DA(T20):DC(N61) DT(T21):DG(N60) DT(T22):DA(N42) DT(T23):DC(N41) DT(T33):DA(N40) DA(T34):DT(N39) DC(T35):DG(N38) DA(T36):DT(N37) DA(T37):DT(N36) DC(T38):DG(N35) DA(T39):DT(N34) DC(T40):DG(N33) DA(T41):DT(N32) DC(T42):DG(N31) DT(T43):DA(N30) DA(T44):DT(N29) DT(T45):DA(N28) DT(T46):DA(N27) DA(T47):DT(N26) DT(T48):DA(N25) DA(T49):DT(N24) DT(T50):DA(N23) DA(T51):DT(N22) DC(T52):DG(N21) DA(T53):DT(N20) DC(T54):DG(N19) DA(T55):DT(N18) DG(T56):DC(N17) DC(T57):DG(N16) DG(T58):DC(N15) DT(T59):DA(N14) DG(T60):DC(N13) DC(T61):DG(N12) DT(T62):DA(N11) DA(T63):DT(N10) DC(T64):DG(N9) DT(T65):DA(N8) DG(T66):DC(N7) DT(T67):DA(N6) DT(T68):DA(N5) chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm >4v1o_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ARCHITECTURE OF THE RNA POLYMERASE II-MEDIATOR CORE TRANSCRIPTION INITIATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N5):DT(T68) DA(N6):DT(T67) DC(N7):DG(T66) DA(N8):DT(T65) DG(N9):DC(T64) DT(N10):DA(T63) DA(N11):DT(T62) DG(N12):DC(T61) DC(N13):DG(T60) DA(N14):DT(T59) DC(N15):DG(T58) DG(N16):DC(T57) DC(N17):DG(T56) DT(N18):DA(T55) DG(N19):DC(T54) DT(N20):DA(T53) DG(N21):DC(T52) DT(N22):DA(T51) DA(N23):DT(T50) DT(N24):DA(T49) DA(N25):DT(T48) DT(N26):DA(T47) DA(N27):DT(T46) DA(N28):DT(T45) DT(N29):DA(T44) DA(N30):DT(T43) DG(N31):DC(T42) DT(N32):DA(T41) DG(N33):DC(T40) DT(N34):DA(T39) DG(N35):DC(T38) DT(N36):DA(T37) DT(N37):DA(T36) DG(N38):DC(T35) DT(N39):DA(T34) DA(N40):DT(T33) DC(N41):DT(T23) DA(N42):DT(T22) DG(N60):DT(T21) DC(N61):DA(T20) DA(N62):DT(T19) DC(N63):DA(T18) DA(N64):DG(T17) DA(N65):DT(T16) DC(N66):DA(T15) DT(N67):DT(T14) DG(N68):DC(T13) DC(N69):DG(T12) DG(N70):DT(T11) DC(N71):DG(T10) chainA (348) ARG350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (446) PRO448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (829) THR831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 (830) ALA832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (1353) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp >4v1o_ABMO:TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon; title=ARCHITECTURE OF THE RNA POLYMERASE II-MEDIATOR CORE TRANSCRIPTION INITIATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N5):DT(T68) DA(N6):DT(T67) DC(N7):DG(T66) DA(N8):DT(T65) DG(N9):DC(T64) DT(N10):DA(T63) DA(N11):DT(T62) DG(N12):DC(T61) DC(N13):DG(T60) DA(N14):DT(T59) DC(N15):DG(T58) DG(N16):DC(T57) DC(N17):DG(T56) DT(N18):DA(T55) DG(N19):DC(T54) DT(N20):DA(T53) DG(N21):DC(T52) DT(N22):DA(T51) DA(N23):DT(T50) DT(N24):DA(T49) DA(N25):DT(T48) DT(N26):DA(T47) DA(N27):DT(T46) DA(N28):DT(T45) DT(N29):DA(T44) DA(N30):DT(T43) DG(N31):DC(T42) DT(N32):DA(T41) DG(N33):DC(T40) DT(N34):DA(T39) DG(N35):DC(T38) DT(N36):DA(T37) DT(N37):DA(T36) DG(N38):DC(T35) DT(N39):DA(T34) DA(N40):DT(T33) DC(N41):DT(T23) DA(N42):DT(T22) DG(N60):DT(T21) DC(N61):DA(T20) DA(N62):DT(T19) DC(N63):DA(T18) DA(N64):DG(T17) DA(N65):DT(T16) DC(N66):DA(T15) DT(N67):DT(T14) DG(N68):DC(T13) DC(N69):DG(T12) DG(N70):DT(T11) DC(N71):DG(T10) chainA (348) ARG350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (446) PRO448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (829) THR831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 (830) ALA832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (1353) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 chainB chainM ( 43) ARG64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ASP69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 19 0 0 0 0 0 0 0 0 0 0 0 0 (229) LYS272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) THR308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhttesdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidelkyelgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgymInrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveeahdfnmklainaktitsglkyalatgnwgeqkkamssragvSqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlRMkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf/ltcpeckvyppkiverfsegdvvcalcglvlsdklvdtrsewRtfsnDdhngddpsrvgeasnplldgnnlstrigkgettdmrftkelnkaqgknvkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktkefgktlnimkniaqnltyiprfcshlglpmqvttsaeytakkckeikeiagKspitiavvsiylnillfqipitaakvgqtlqvtegTiksgykilyehrdklvdpqliangvvsldnlpgv/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm >4wcg_A:"Winged_helix"_DNA-binding_domain; title=THE BINDING MODE OF CYPRINID HERPESVIRUS3 ORF112-ZALPHA TO Z-DNA organism=CYPRINID HERPESVIRUS 3 DNA sequence DC(D5):DG(C6) DG(D6):DC(C5) chainA ( 42) ARG258 0 5 prot.sequence piseemnlkilaylgtkqgakavhiaqslgaqrsevnrhlyRmsedgrvrkhpqhpvwylp >4wcg_AB:"Winged_helix"_DNA-binding_domain; title=THE BINDING MODE OF CYPRINID HERPESVIRUS3 ORF112-ZALPHA TO Z-DNA organism=CYPRINID HERPESVIRUS 3 DNA sequence DC(C5):DG(D6) DG(C6):DC(D5) chainA ( 42) ARG258 5 0 chainB ( 42) ARG258 0 5 prot.sequence piseemnlkilaylgtkqgakavhiaqslgaqrsevnrhlyRmsedgrvrkhpqhpvwylp/piseemnlkilaylgtkqgakavhiaqslgaqrsevnrhlyRmsedgrvrkhpqhpvwylp >4wk8_F:"Winged_helix"_DNA-binding_domain; title=FOXP3 FORMS A DOMAIN-SWAPPED DIMER TO BRIDGE DNA organism=Homo sapiens DNA sequence DC(B5003):DG(A4021) DT(B5004):DA(A4020) DA(B5005):DT(A4019) DT(B5006):DA(A4018) DG(B5007):DC(A4017) DA(B5008):DT(A4016) DA(B5009):DT(A4015) DA(B5010):DT(A4014) DC(B5011):DG(A4013) DA(B5012):DT(A4012) DA(B5013):DT(A4011) DA(B5014):DT(A4010) DT(B5015):DA(A4009) DT(B5016):DA(A4008) DT(B5017):DA(A4007) DT(B5018):DA(A4006) DC(B5019):DG(A4005) DC(B5020):DG(A4004) DT(B5021):DA(A4003) chainF ( 47) ASN383 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 ( 50) ARG386 0 0 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 0 ( 51) HIS387 0 0 0 0 0 0 0 0 7 8 9 0 0 0 0 0 0 0 0 ( 54) SER390 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 ( 55) LEU391 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence rppftyatlirwaileapekqrtlneiyhwftrmfaffrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdelefrkk >4wk8_FG: title=FOXP3 FORMS A DOMAIN-SWAPPED DIMER TO BRIDGE DNA organism=Homo sapiens DNA sequence DA(A4003):DT(B5021) DG(A4004):DC(B5020) DG(A4005):DC(B5019) DA(A4006):DT(B5018) DA(A4007):DT(B5017) DA(A4008):DT(B5016) DA(A4009):DT(B5015) DT(A4010):DA(B5014) DT(A4011):DA(B5013) DT(A4012):DA(B5012) DG(A4013):DC(B5011) DT(A4014):DA(B5010) DT(A4015):DA(B5009) DT(A4016):DA(B5008) DC(A4017):DG(B5007) DA(A4018):DT(B5006) DT(A4019):DA(B5005) DA(A4020):DT(B5004) DG(A4021):DC(B5003) chainF ( 47) ASN383 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 ( 50) ARG386 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 ( 51) HIS387 0 0 0 0 0 0 0 0 9 8 7 0 0 0 0 0 0 0 0 ( 54) SER390 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 ( 55) LEU391 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainG prot.sequence rppftyatlirwaileapekqrtlneiyhwftrmfaffrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdelefrkk/rppftyatlirwaileapekqrtlneiyhwftrmfaffrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdelefrkk >4wls_AB: title=CRYSTAL STRUCTURE OF THE METAL-FREE (REPRESSOR) FORM OF E. COLI CUER, A COPPER EFFLUX REGULATOR, BOUND TO COPA PROMOTER DNA organism=Escherichia coli DH5[alpha] / Escherichia coli DH5[alpha] / Escherichia coli DH5[alpha] / Escherichia coli DH5[alpha] DNA sequence DT(X1):DA(Y26) DG(X2):DC(Y25) DA(X3):DT(Y24) DC(X4):DG(Y23) DC(X5):DG(Y22) DT(X6):DA(Y21) DT(X7):DA(Y20) DC(X8):DG(Y19) DC(X9):DG(Y18) DC(X10):DG(Y17) DC(X11):DG(Y16) DT(X12):DA(Y15) DT(X13):DA(Y14) DG(X14):DC(Y13) DC(X15):DG(Y12) DT(X16):DA(Y11) DG(X17):DC(Y10) DG(X18):DC(Y9) DA(X19):DT(Y8) DA(X20):DT(Y7) DG(X21):DC(Y6) DG(X22):DC(Y5) DT(X23):DA(Y4) DT(X24):DA(Y3) DT(X25):DA(Y2) DA(X26):DT(Y1) chainA ( 15) LYS15 0 0 0 0 0 0 0 6 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 8 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 prot.sequence mnisdvakitgltsKaiRFyeekglvtppmrsengYrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalana/mnisdvakitgltsKaiRFyeekglvtppmrsengYrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalana >4wls_B:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE METAL-FREE (REPRESSOR) FORM OF E. COLI CUER, A COPPER EFFLUX REGULATOR, BOUND TO COPA PROMOTER DNA organism=Escherichia coli DH5[alpha] / Escherichia coli DH5[alpha] DNA sequence DT(Y1):DA(X26) DA(Y2):DT(X25) DA(Y3):DT(X24) DA(Y4):DT(X23) DC(Y5):DG(X22) DC(Y6):DG(X21) DT(Y7):DA(X20) DT(Y8):DA(X19) DC(Y9):DG(X18) DC(Y10):DG(X17) DA(Y11):DT(X16) DG(Y12):DC(X15) DC(Y13):DG(X14) DA(Y14):DT(X13) DA(Y15):DT(X12) DG(Y16):DC(X11) DG(Y17):DC(X10) DG(Y18):DC(X9) DG(Y19):DC(X8) DA(Y20):DT(X7) DA(Y21):DT(X6) DG(Y22):DC(X5) DG(Y23):DC(X4) DT(Y24):DA(X3) DC(Y25):DG(X2) DA(Y26):DT(X1) chainB ( 15) LYS15 0 0 0 0 0 0 0 0 8 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnisdvakitgltsKaiRFyeekglvtppmrsengYrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalana >4wlw_A:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE AG(I) (ACTIVATOR) FORM OF E. COLI CUER, A COPPER EFFLUX REGULATOR, BOUND TO COPA PROMOTER DNA organism=Escherichia coli DNA sequence DG(X1):DC(Y23) DA(X2):DT(Y22) DC(X3):DG(Y21) DC(X4):DG(Y20) DT(X5):DA(Y19) DT(X6):DA(Y18) DC(X7):DG(Y17) DC(X8):DG(Y16) DC(X9):DG(Y15) DC(X10):DG(Y14) DT(X11):DA(Y13) DT(X12):DA(Y12) DG(X13):DC(Y11) DC(X14):DG(Y10) DT(X15):DA(Y9) DG(X16):DC(Y8) DG(X17):DC(Y7) DA(X18):DT(Y6) DA(X19):DT(Y5) DG(X20):DC(Y4) DG(X21):DC(Y3) DT(X22):DA(Y2) DC(X23):DG(Y1) chainA ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 7 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 3 0 prot.sequence mnisdvakitgltsKaiRFyeekglvtppmrsengYrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalanacpgddsadcpiienlsgcc >4wqs_CD: title=THERMUS THERMOPHILUS RNA POLYMERASE BACKTRACKED COMPLEX organism=THERMUS THERMOPHILUS HB8 DNA sequence DT(G2):DA(I17) DC(G3):DG(I16) DA(G4):DT(I15) DC(G5):DG(I14) DT(G6):DA(I13) DA(G7):DT(I12) DC(G8):DG(I11) DC(G9):DG(I10) DA(G10):DT(I9) DC(G11):DG(I8) DA(G12):DT(I7) DA(G13):DT(I6) DG(G14):DC(I5) DC(G15):DG(I4) DT(G16):DA(I3) DA(G17):DT(I2) DC(G18):DG(I1) chainC (422) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 (423) ALA423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainD (196) ALA487 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (797) TYR1093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeedkgkgglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRAgfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglaskr/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelryarmgaeaiqqllkeldlealekelleemkhpsrArrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetrssfregltvleyfisshgarkggadtalrtadsgYltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmrtfhtggvagaaditqglprvielfearrpkaaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkeavea >4wu4_A:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 22BP DNA organism=? DNA sequence DG(G-86):DC(H-86) DG(G-87):DC(H-87) DA(G-88):DT(H-88) DC(G-89):DG(H-89) DT(G-90):DA(H-90) DT(G-91):DA(H-91) DA(G-92):DT(H-92) DA(G-93):DT(H-93) DG(G-94):DC(H-94) DA(G-95):DT(H-95) DA(G-96):DT(H-96) DC(G-97):DG(H-97) DG(G-98):DC(H-98) DA(G-99):DT(H-99) DT(G-100):DA(H-100) DT(G-101):DA(H-101) DT(G-102):DA(H-102) chainA ( 36) LYS174 16 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS177 0 0 2 9 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER181 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mvlhedltnreheilmliaqgksnqeiadelfitlKtvKthvSnilakldvdnrtqaaiyafqhglak >4wu4_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 22BP DNA organism=? DNA sequence DA(H-102):DT(G-102) DA(H-101):DT(G-101) DA(H-100):DT(G-100) DT(H-99):DA(G-99) DC(H-98):DG(G-98) DG(H-97):DC(G-97) DT(H-96):DA(G-96) DT(H-95):DA(G-95) DC(H-94):DG(G-94) DT(H-93):DA(G-93) DT(H-92):DA(G-92) DA(H-91):DT(G-91) DA(H-90):DT(G-90) DG(H-89):DC(G-89) DT(H-88):DA(G-88) DC(H-87):DG(G-87) DC(H-86):DG(G-86) chainA ( 36) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 16 ( 39) LYS177 0 0 0 0 0 0 0 0 0 0 0 0 5 9 2 0 0 ( 43) SER181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 chainB ( 34) THR172 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) LYS174 0 0 0 0 19 18 7 0 0 0 0 0 0 0 0 0 0 ( 37) THR175 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS177 0 0 0 0 0 0 0 1 10 4 0 0 0 0 0 0 0 ( 40) THR178 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) HIS179 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mvlhedltnreheilmliaqgksnqeiadelfitlKtvKthvSnilakldvdnrtqaaiyafqhglak/mvlhedltnreheilmliaqgksnqeiadelfiTlKTvKTHvsNilakldvdnrtqaaiyafqhglak >4wu8_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF TRPTNAP-NCP145 organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgiSskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaerVgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4wu9_A:Histone-fold; title=STRUCTURE OF CISPTNAP-NCP145 organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge >4wu9_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF CISPTNAP-NCP145 organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgisskaMsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4wuh_B:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIAR WILD TYPE COMPLEXED WITH 22BP DNA organism=Enterococcus faecalis S613 DNA sequence DA(C0):DT(G102) DA(C1):DT(G101) DA(C2):DT(G100) DT(C3):DA(G99) DC(C4):DG(G98) DG(C5):DC(G97) DT(H-102):DA(G96) DT(H-101):DA(G95) DC(H-100):DG(G94) DT(H-99):DA(G93) DT(H-98):DA(G92) DA(H-97):DT(G91) DA(H-96):DT(G90) DG(H-95):DC(G89) DT(H-94):DA(G88) DC(H-93):DG(G87) DC(H-92):DG(G86) chainB ( 36) LYS175 0 0 0 0 19 16 7 0 0 0 0 0 0 0 0 0 0 ( 37) THR176 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS178 0 0 0 0 0 0 0 2 11 4 0 0 0 0 0 0 0 ( 40) THR179 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) HIS180 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mvlhedltnreheilmliaqgksnqeiadelfitlKTvKTHvsnilakldvdnrtqaaiyafqhglak >4wul_A:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 26BP DNA organism=? DNA sequence DC(H-123):DG(C-123) DT(H-122):DA(C-122) DA(H-121):DT(C-121) DG(H-120):DC(C-120) DT(H-119):DA(C-119) DC(H-118):DG(C-118) DC(H-117):DG(C-117) DT(H-116):DA(C-116) DT(H-115):DA(C-115) DA(H-114):DT(C-114) DC(H-113):DG(C-113) DT(H-112):DA(C-112) DA(H-111):DT(C-111) DA(H-110):DT(C-110) DT(H-109):DA(C-109) DG(H-108):DC(C-108) DA(H-107):DT(C-107) DG(H-106):DC(C-106) DA(H-105):DT(C-105) DA(H-104):DT(C-104) DG(H-103):DC(C-103) DA(H-102):DT(C-102) DA(H-101):DT(C-101) DA(H-100):DT(C-100) DT(H-99):DA(C-99) chainA ( 34) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 ( 35) THR175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 ( 37) LYS177 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 4 0 0 0 0 0 0 0 0 ( 39) HIS179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 41) SER181 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lhedltnreheilmliaqgksnqeiadelfitlKTvKTHvSNilakldvdnrtqaaiyafqhgla >4wul_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 26BP DNA organism=? DNA sequence DC(H-123):DG(C-123) DT(H-122):DA(C-122) DA(H-121):DT(C-121) DG(H-120):DC(C-120) DT(H-119):DA(C-119) DC(H-118):DG(C-118) DC(H-117):DG(C-117) DT(H-116):DA(C-116) DT(H-115):DA(C-115) DA(H-114):DT(C-114) DC(H-113):DG(C-113) DT(H-112):DA(C-112) DA(H-111):DT(C-111) DA(H-110):DT(C-110) DT(H-109):DA(C-109) DG(H-108):DC(C-108) DA(H-107):DT(C-107) DG(H-106):DC(C-106) DA(H-105):DT(C-105) DA(H-104):DT(C-104) DG(H-103):DC(C-103) DA(H-102):DT(C-102) DA(H-101):DT(C-101) DA(H-100):DT(C-100) DT(H-99):DA(C-99) chainA ( 34) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 ( 35) THR175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 ( 37) LYS177 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 4 0 0 0 0 0 0 0 0 ( 39) HIS179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 41) SER181 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 33) LYS174 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR175 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) LYS177 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR178 0 5 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) HIS179 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lhedltnreheilmliaqgksnqeiadelfitlKTvKTHvSNilakldvdnrtqaaiyafqhgla/hedltnreheilmliaqgksnqeiadelfitlKTvKTHvSNilakldvdnrtqaaiyafqhgla >4wuz_ABC:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF LAMBDA EXONUCLEASE IN COMPLEX WITH DNA AND CA2+ organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DT(D1):DA(E14) DC(D2):DG(E13) DG(D3):DC(E12) DG(D4):DC(E11) DT(D5):DA(E10) DA(D6):DT(E9) DC(D7):DG(E8) DA(D8):DT(E7) DG(D9):DC(E6) DT(D10):DA(E5) DA(D11):DT(E4) DG(D12):DC(E3) chainA chainB ( 53) MET53 0 0 0 0 0 0 0 0 3 3 0 0 ( 73) VAL73 0 0 0 0 0 0 0 0 0 0 0 5 ( 75) ALA75 0 0 0 0 0 0 0 0 0 0 0 3 ( 77) ALA77 0 0 0 0 0 0 0 0 0 0 0 3 ( 78) LEU78 0 0 0 0 0 0 0 0 0 0 0 19 (151) LYS151 0 0 0 0 0 0 0 0 0 0 1 0 chainC ( 44) ARG45 0 0 4 7 8 1 0 0 0 0 0 0 prot.sequence mtpdiilqrtgidvraveqgddawhklrlgvitasevhnviakprsgkkwpdmkmsyfhtllaevctgvapevnakalawgkqyendartlfeftsgvnvtespiiyrdesmrtacspdglcsdgnglelkcpftsrdfmkfrlggfeaiksaymaqvqysmwvtrknawyfanydprmkreglhyvvierdekymasfdeivpefiekmdealaeigfvfgeqwr/mtpdiilqrtgidvraveqgddawhklrlgvitasevhnviakprsgkkwpdMkmsyfhtllaevctgvapeVnAkALawgkqyendartlfeftsgvnvtespiiyrdesmrtacspdglcsdgnglelkcpftsrdfmkfrlggfeaiKsaymaqvqysmwvtrknawyfanydprmkreglhyvvierdekymasfdeivpefiekmdealaeigfvfgeqwr/tpdiilqrtgidvraveqgddawhklrlgvitasevhnviakpRsgkkwpdmkmsyfhtllaevctgvapevnakalawgkqyendartlfeftsgvnvtespiiyrdesmrtacspdglcsdgnglelkcpftsrdfmkfrlggfeaiksaymaqvqysmwvtrknawyfanydprmkreglhyvvierdekymasfdeivpefiekmdealaeigfvfgeqwr >4wuz_C:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF LAMBDA EXONUCLEASE IN COMPLEX WITH DNA AND CA2+ organism=? DNA sequence DC(E3):DG(D12) DT(E4):DA(D11) DA(E5):DT(D10) DC(E6):DG(D9) DT(E7):DA(D8) DG(E8):DC(D7) DT(E9):DA(D6) DA(E10):DT(D5) DC(E11):DG(D4) DC(E12):DG(D3) DG(E13):DC(D2) DA(E14):DT(D1) chainC ( 44) ARG45 0 0 0 0 0 0 1 8 7 4 0 0 prot.sequence tpdiilqrtgidvraveqgddawhklrlgvitasevhnviakpRsgkkwpdmkmsyfhtllaevctgvapevnakalawgkqyendartlfeftsgvnvtespiiyrdesmrtacspdglcsdgnglelkcpftsrdfmkfrlggfeaiksaymaqvqysmwvtrknawyfanydprmkreglhyvvierdekymasfdeivpefiekmdealaeigfvfgeqwr >4wwc_AB:Chorismate_lyase-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FULL LENGTH YVOA IN COMPLEX WITH PALINDROMIC OPERATOR DNA organism=Bacillus subtilis DNA sequence DC(E1):DG(F18) DA(E2):DT(F17) DG(E3):DC(F16) DT(E4):DA(F15) DG(E5):DC(F14) DG(E6):DC(F13) DT(E7):DA(F12) DC(E8):DG(F11) DT(E9):DA(F10) DA(E10):DT(F9) DG(E11):DC(F8) DA(E12):DT(F7) DC(E13):DG(F6) DC(E14):DG(F5) DA(E15):DT(F4) DC(E16):DG(F3) DT(E17):DA(F2) DG(E18):DC(F1) chainA ( 38) GLU37 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 39) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 2 11 8 0 0 0 ( 48) SER47 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 ( 49) ARG48 0 0 0 0 0 0 0 0 0 0 0 5 10 8 0 0 0 0 ( 50) MET49 0 0 0 0 0 0 0 0 1 1 2 2 0 0 0 0 0 0 ( 51) THR50 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 53) ARG52 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 chainB ( 38) GLU37 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG38 0 0 0 10 10 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) SER47 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 ( 49) ARG48 0 0 0 0 12 14 7 0 0 0 0 0 0 0 0 0 0 0 ( 50) MET49 0 0 0 0 0 0 2 4 2 2 0 0 0 0 0 0 0 0 ( 51) THR50 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 53) ARG52 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmninkqspipiyyqimeqlktqikngelqpdmplpsEReyaeqfgiSRMTvRqalsnlvnegllyrlkgrgtfvskpkmqgltsftedmksrgmtpgsrlidyqlidsteelaailgcghssihkitrvrlandipmaiesshipfeisrakqelepsaatteeanilgiqkgapvllikrttylqngtafehaksvyrgdrytfvhymdrl/hmninkqspipiyyqimeqlktqikngelqpdmplpsEReyaeqfgiSRMTvRqalsnlvnegllyrlkgrgtfvskpkmeqgltsftedmksrgmtpgsrlidyqlidseelaailgcgpssihkitrvrlandipmaiesshipfelagelnesiydhierynsipisrakqelepsaatteeanilgiqkgapvllikrttylqngtafehaksvyrgdrytfvhymd >4wwc_B:Chorismate_lyase-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FULL LENGTH YVOA IN COMPLEX WITH PALINDROMIC OPERATOR DNA organism=Bacillus subtilis DNA sequence DC(E1):DG(F18) DA(E2):DT(F17) DG(E3):DC(F16) DT(E4):DA(F15) DG(E5):DC(F14) DG(E6):DC(F13) DT(E7):DA(F12) DC(E8):DG(F11) DT(E9):DA(F10) DA(E10):DT(F9) DG(E11):DC(F8) DA(E12):DT(F7) DC(E13):DG(F6) DC(E14):DG(F5) DA(E15):DT(F4) DC(E16):DG(F3) DT(E17):DA(F2) DG(E18):DC(F1) chainB ( 38) GLU37 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG38 0 0 0 10 10 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) SER47 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 ( 49) ARG48 0 0 0 0 12 14 7 0 0 0 0 0 0 0 0 0 0 0 ( 50) MET49 0 0 0 0 0 0 2 4 2 2 0 0 0 0 0 0 0 0 ( 51) THR50 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 53) ARG52 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmninkqspipiyyqimeqlktqikngelqpdmplpsEReyaeqfgiSRMTvRqalsnlvnegllyrlkgrgtfvskpkmeqgltsftedmksrgmtpgsrlidyqlidseelaailgcgpssihkitrvrlandipmaiesshipfelagelnesiydhierynsipisrakqelepsaatteeanilgiqkgapvllikrttylqngtafehaksvyrgdrytfvhymd >4wx9_A:Methylated_DNA-protein_cysteine_methyltransferase,_C-terminal_domain;Methylated_DNA-protein_cysteine_methyltransferase_domain; title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS OGT IN COMPLEX WITH DNA organism=Mycobacterium tuberculosis DNA sequence DT(E14):DA(D13) DA(E15):DT(D12) DC(E16):DG(D11) DT(E17):DA(D10) DG(E19):DC(D8) DC(E21):DG(D6) DA(E22):DT(D5) DG(E24):DC(D3) DG(E25):DC(D2) DC(E26):DG(D1) chainA (105) ARG109 0 0 0 0 24 43 0 0 0 0 (106) ALA110 0 0 0 0 0 1 0 0 0 0 (109) LEU113 0 0 0 0 0 7 0 0 0 0 prot.sequence vhyrtidspigpltlaghgsvltnlrmleqtsrthwtpdpgafsgavdqlnayfageltefdveldlrgtdfqqrvwkalltipygetrsygeiadqigapgaaRAvgLanghnpiaiivpchrvigasgkltgyggginrkralleleksrapadltlfd >4wzs_ABD:Histone-fold;TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE MOT1 N-TERMINAL DOMAIN IN COMPLEX WITH TBP AND NC2 BOUND TO A PROMOTER DNA FRAGMENT organism=ENCEPHALITOZOON CUNICULI (STRAIN GB-M1) / ENCEPHALITOZOON CUNICULI (STRAIN GB-M1) / ENCEPHALITOZOON CUNICULI (STRAIN GB-M1) / ENCEPHALITOZOON CUNICULI (STRAIN GB-M1) DNA sequence DG(F5):DC(E20) DG(F6):DC(E19) DG(F7):DC(E18) DC(F8):DG(E17) DT(F9):DA(E16) DA(F10):DT(E15) DT(F11):DA(E14) DA(F12):DT(E13) DA(F13):DT(E12) DA(F14):DT(E11) DA(F15):DT(E10) DG(F16):DC(E9) DG(F17):DC(E8) DG(F18):DC(E7) DG(F19):DC(E6) DG(F20):DC(E5) DT(F21):DA(E4) DG(F22):DC(E3) DG(F23):DC(E2) chainA chainB chainD ( 9) ASN27 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 ( 11) VAL29 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 ( 39) PHE57 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 ( 54) LEU72 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 ( 56) PHE74 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 62) VAL80 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 64) THR82 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 ( 99) ASN117 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 (101) VAL119 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 (130) PHE148 0 0 0 0 10 23 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO149 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU163 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE165 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL171 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR173 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pisrlkrimqlnedigkigasvpvvaskaiemflteivgltlkeasefiiratesdpkfaflknme/lpkatvdkmvsssvvpkeskeifqnaciyflnmltleankaceeekkktisyehvykalknlgfesyvescmkehenyesyikqkdsgltmeelhsqqiklfqnaklqfersf/sgiiptlqNvVatvnlsckldlknialrarnaeynpkrFaavimrirepkttaLiFasgkmViTgaksekssrmaaqryakiihklgfnatfddfkiqNiVsscdikfsirleglayahsnycsyepelFPgliyrmvkpkivlLiFvsgkiVlTgakvrddiyqafnniypvliqhr >4wzs_D:TATA-box_binding_protein-like; title=CRYSTAL STRUCTURE OF THE MOT1 N-TERMINAL DOMAIN IN COMPLEX WITH TBP AND NC2 BOUND TO A PROMOTER DNA FRAGMENT organism=ENCEPHALITOZOON CUNICULI (STRAIN GB-M1) / ENCEPHALITOZOON CUNICULI (STRAIN GB-M1) DNA sequence DG(F5):DC(E20) DG(F6):DC(E19) DG(F7):DC(E18) DC(F8):DG(E17) DT(F9):DA(E16) DA(F10):DT(E15) DT(F11):DA(E14) DA(F12):DT(E13) DA(F13):DT(E12) DA(F14):DT(E11) DA(F15):DT(E10) DG(F16):DC(E9) DG(F17):DC(E8) DG(F18):DC(E7) DG(F19):DC(E6) DG(F20):DC(E5) DT(F21):DA(E4) DG(F22):DC(E3) DG(F23):DC(E2) chainD ( 9) ASN27 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 ( 11) VAL29 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 ( 39) PHE57 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 ( 54) LEU72 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 ( 56) PHE74 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 62) VAL80 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 64) THR82 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 ( 99) ASN117 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 (101) VAL119 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 (130) PHE148 0 0 0 0 10 23 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO149 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU163 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE165 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL171 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR173 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgiiptlqNvVatvnlsckldlknialrarnaeynpkrFaavimrirepkttaLiFasgkmViTgaksekssrmaaqryakiihklgfnatfddfkiqNiVsscdikfsirleglayahsnycsyepelFPgliyrmvkpkivlLiFvsgkiVlTgakvrddiyqafnniypvliqhr >4wzw_A:ARM_repeat; title=CRYSTAL STRUCTURE OF HUMAN PUF-A IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(B1):DC(C15) DG(B2):DC(C14) DG(B3):DC(C13) DG(B4):DC(C12) DG(B5):DC(C11) DG(B6):DC(C10) DG(B7):DC(C9) DG(B8):DC(C8) DG(B9):DC(C7) DG(B10):DC(C6) DG(B11):DC(C5) DG(B12):DC(C4) DG(B13):DC(C3) DG(B14):DC(C2) chainA (133) ASP261 0 0 0 0 0 0 0 0 0 0 0 1 1 0 prot.sequence ktnydivvrakqmweilrrkdcdkekrvklmsdlqkliqgkiktiafahdstrviqcyiqygneeqrkqafeelrddlvelskakysrnivkkflmygskpqiaeiirsfkghvrkmlrhaeasaiveyaynDkaileqrnmlteelygntfqlyksadhptldkvlevqpeklelimdemkqiltpmaqkeavikhslvhkvfldfftyappklrsemieaireavvylahthdgarvamhclwhgtpkdrkvivktmktyvekvangqyshlvllaafdciddtklvkqiiiseiisslpsivndkygrkvllyllsprdpahtvreiievlqkgdgnahskkdtevrrrellesispallsylqehaqevvldksacvlvsdilgsatgdvqptmnaiaslaatglhplhiaehpaghlvlkwlieqdkkmkengregcfaktlvehvgmknlkswasvnrgaiilssllqscdlevankvkaalksliptlekgieillek >4x0g_AB: title=STRUCTURE OF BSG25A BINDING WITH DNA organism=Drosophila melanogaster DNA sequence DT(E2):DA(F13) DT(E3):DA(F12) DC(E4):DG(F11) DC(E5):DG(F10) DA(E6):DT(F9) DA(E7):DT(F8) DT(E8):DA(F7) DT(E9):DA(F6) DG(E10):DC(F5) DG(E11):DC(F4) DA(E12):DT(F3) DA(E13):DT(F2) chainA ( 31) ARG33 0 0 0 0 0 0 0 0 0 0 1 0 ( 53) SER55 0 0 0 0 0 6 0 0 0 0 0 0 ( 54) PRO56 0 0 0 8 7 0 0 0 0 0 0 0 ( 55) ALA57 0 0 0 0 1 1 0 0 0 0 0 0 ( 56) PHE58 0 0 0 0 0 0 1 0 0 0 0 0 ( 95) THR97 0 0 0 0 0 1 0 0 0 0 0 0 ( 99) ALA101 0 0 0 0 0 0 1 1 0 0 0 0 (100) ASP102 0 0 0 0 0 0 0 0 0 1 8 0 (103) LYS105 0 0 0 0 0 0 0 5 9 2 0 0 (104) MET106 0 0 0 0 0 0 0 0 0 0 1 0 chainB ( 31) ARG33 0 1 0 0 0 0 0 0 0 0 0 0 ( 53) SER55 0 0 0 0 0 0 7 0 0 0 0 0 ( 54) PRO56 0 0 0 0 0 0 0 5 9 0 0 0 ( 55) ALA57 0 0 0 0 0 0 2 3 0 0 0 0 ( 56) PHE58 0 0 0 0 0 2 0 0 0 0 0 0 ( 95) THR97 0 0 0 0 0 0 1 0 0 0 0 0 ( 99) ALA101 0 0 0 0 1 1 0 0 0 0 0 0 (100) ASP102 0 9 2 0 0 0 0 0 0 0 0 0 (103) LYS105 0 1 6 13 2 0 0 0 0 0 0 0 (104) MET106 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pmvtigpngtevsrislsainwamtgpsitRkllceifdrdtlahhtlsgkpSPAFrdcarpskqqldplkvadlvylmtnscdmtprevrtaiTtkcADenKMlrsr/pmvtigpngtevsrislsainwamtgpsitRkllceifdrdtlahhtlsgkpSPAFrdcarpskqqldplkvadlvylmtnscdmtprevrtaiTtkcADenKMlrsrm >4x0g_B: title=STRUCTURE OF BSG25A BINDING WITH DNA organism=Drosophila melanogaster DNA sequence DT(E2):DA(F13) DT(E3):DA(F12) DC(E4):DG(F11) DC(E5):DG(F10) DA(E6):DT(F9) DA(E7):DT(F8) DT(E8):DA(F7) DT(E9):DA(F6) DG(E10):DC(F5) DG(E11):DC(F4) DA(E12):DT(F3) DA(E13):DT(F2) chainB ( 31) ARG33 0 1 0 0 0 0 0 0 0 0 0 0 ( 53) SER55 0 0 0 0 0 0 7 0 0 0 0 0 ( 54) PRO56 0 0 0 0 0 0 0 5 9 0 0 0 ( 55) ALA57 0 0 0 0 0 0 2 3 0 0 0 0 ( 56) PHE58 0 0 0 0 0 2 0 0 0 0 0 0 ( 95) THR97 0 0 0 0 0 0 1 0 0 0 0 0 ( 99) ALA101 0 0 0 0 1 1 0 0 0 0 0 0 (100) ASP102 0 9 2 0 0 0 0 0 0 0 0 0 (103) LYS105 0 1 6 13 2 0 0 0 0 0 0 0 (104) MET106 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pmvtigpngtevsrislsainwamtgpsitRkllceifdrdtlahhtlsgkpSPAFrdcarpskqqldplkvadlvylmtnscdmtprevrtaiTtkcADenKMlrsrm >4x0g_CD: title=STRUCTURE OF BSG25A BINDING WITH DNA organism=Drosophila melanogaster DNA sequence DT(G2):DA(H13) DT(G3):DA(H12) DC(G4):DG(H11) DC(G5):DG(H10) DA(G6):DT(H9) DA(G7):DT(H8) DT(G8):DA(H7) DT(G9):DA(H6) DG(G10):DC(H5) DG(G11):DC(H4) DA(G12):DT(H3) DA(G13):DT(H2) chainC ( 53) SER55 0 0 0 0 0 5 0 0 0 0 0 0 ( 54) PRO56 0 0 0 8 6 0 0 0 0 0 0 0 ( 55) ALA57 0 0 0 0 3 1 0 0 0 0 0 0 ( 56) PHE58 0 0 0 0 0 0 2 0 0 0 0 0 ( 95) THR97 0 0 0 0 0 1 0 0 0 0 0 0 ( 99) ALA101 0 0 0 0 0 0 1 1 0 0 0 0 (100) ASP102 0 0 0 0 0 0 0 0 0 2 9 0 (103) LYS105 0 0 0 0 0 0 0 0 4 5 1 0 (104) MET106 0 0 0 0 0 0 0 0 0 0 0 2 chainD ( 31) ARG33 0 1 0 0 0 0 0 0 0 0 0 0 ( 53) SER55 0 0 0 0 0 0 5 1 0 0 0 0 ( 54) PRO56 0 0 0 0 0 0 0 9 8 0 0 0 ( 55) ALA57 0 0 0 0 0 0 1 1 0 0 0 0 ( 56) PHE58 0 0 0 0 0 1 0 0 0 0 0 0 ( 95) THR97 0 0 0 0 0 0 1 0 0 0 0 0 ( 99) ALA101 0 0 0 0 1 1 0 0 0 0 0 0 (100) ASP102 0 9 2 0 0 0 0 0 0 0 0 0 (103) LYS105 0 0 4 10 4 0 0 0 0 0 0 0 (104) MET106 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pmvtigpngtevsrislsainwamtgpsitrkllceifdrdtlahhtlsgkpSPAFrdcarpskqqldplkvadlvylmtnscdmtprevrtaiTtkcADenKMlrsrm/pmvtigpngtevsrislsainwamtgpsitRkllceifdrdtlahhtlsgkpSPAFrdcarpskqqldplkvadlvylmtnscdmtprevrtaiTtkcADenKMlrsr >4x0p_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF HUMAN DNA POLYMERASE THETA C-TERMINAL DOMAIN BINDING DDATP OPPOSITE A TETRAHYDROFURAN AP SITE ANALOG organism=Homo sapiens DNA sequence DC(J2):DG(I16) DG(J3):DC(I15) DG(J4):DC(I14) DC(J5):DG(I13) DT(J6):DA(I12) DG(J7):DC(I11) DT(J8):DA(I10) DC(J9):DG(I9) DA(J10):DT(I8) DT(J11):DA(I7) DT(J12):DA(I6) DC(J13):DG(I5) chainC (300) ASN2205 0 0 0 0 0 0 0 0 1 0 0 0 (304) LYS2209 0 0 0 0 0 0 11 10 0 0 0 0 (336) ARG2241 0 0 0 0 0 0 0 0 0 0 1 7 (346) ASN2251 0 0 0 0 0 0 0 0 1 5 0 0 (433) GLN2384 0 0 0 0 0 0 0 0 0 0 0 3 (523) GLN2474 0 0 0 0 0 0 0 0 0 0 1 12 (574) HIS2539 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence slsiidvasdqnlfqtfikewrckkrfsislacekirddtlvvglavcwggrdayyfslldpsltlkdrmwylqsclrkesdkecsvviydfiqsykilllscgisleqsyedpkvacwlldpdsqeptlhsivtsflphelpllegmetsqgiqslglnagsehsgryrasvesilifnsmnqlnsllqkenlqdvfrkvempsqyclallelngigfstaecesqkhimqakldaietqayqlaghsfsftssddiaevlflelklppqfstskdvlnklkalhplpglilewrritNaitKvvfplqrekclnpflgmeriypvsqshtatgRitftepniqNvprdfeikmgmpfsismrhafvpfpggsilaadysqlelrilahlshdrrliqvlntgadvfrsiaaewkmiepesvgddlrqqakQicygiiygmgakslgeqmgikendaacyidsfksrytginqfmtetvknckrdgfvqtilgrrrylpgikdnnpyrkahaerqaintivQgsaadivkiatvniqkqletfhstfkshghregmlqsdcpirggffilqlHdellyevaeedvvqvaqivknemesavklsvklkvkvkigaswgelkdfdv >4x0q_B:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF HUMAN DNA POLYMERASE THETA C-TERMINAL DOMAIN BINDING DDGTP OPPOSITE DCMP organism=Homo sapiens DNA sequence DC(H5):DG(G13) DT(H6):DA(G12) DG(H7):DC(G11) DT(H8):DA(G10) DC(H9):DG(G9) DA(H10):DT(G8) DT(H11):DA(G7) DT(H12):DA(G6) DG(H13):DC(G5) DG3(B2604):DC(G4) chainB (300) ASN2205 0 0 0 0 0 1 0 0 0 0 (304) LYS2209 0 0 0 1 0 0 0 0 0 0 (336) ARG2241 0 0 0 0 0 0 0 2 9 0 (346) ASN2251 0 0 0 0 0 1 5 1 0 0 (379) ASP2330 0 0 0 0 0 0 0 0 0 5 (382) GLN2333 0 0 0 0 0 0 0 0 0 2 (408) PHE2359 0 0 0 0 0 0 0 0 0 3 (428) ARG2379 0 0 0 0 0 0 0 0 0 7 (432) LYS2383 0 0 0 0 0 0 0 0 0 11 (433) GLN2384 0 0 0 0 0 0 0 1 1 6 (436) TYR2387 0 0 0 0 0 0 0 0 0 17 (440) TYR2391 0 0 0 0 0 0 0 0 0 4 (442) MET2393 0 0 0 0 0 0 0 0 0 3 (450) GLN2401 0 0 0 0 0 0 0 0 0 1 (523) GLN2474 0 0 0 0 0 0 0 0 8 2 (575) ASP2540 0 0 0 0 0 0 0 0 0 6 (610) LYS2575 0 0 0 0 0 0 0 0 0 1 prot.sequence slsiidvasdqnlfqtfikewrckkrfsislacekirddtlvvglavcwggrdayyfslldpsltlkdrmwylqsclrkesdkecsvviydfiqsykilllscgisleqsyedpkvacwlldpdsqeptlhsivtsflphelpllegmetsqgiqslglnagsehsgryrasvesilifnsmnqlnsllqkenlqdvfrkvempsqyclallelngigfstaecesqkhimqakldaietqayqlaghsfsftssddiaevlflelklppqfstskdvlnklkalhplpglilewrritNaitKvvfplqrekclnpflgmeriypvsqshtatgRitftepniqNvprdfeikmgmpfsismrhafvpfpggsilaadysqlelrilahlshdrrliqvlntgadvfrsiaaewkmiepesvgddlrqqakQicygiiYgMgakslgeQmgikendaacyidsfksrytginqfmtetvknckrdgfvqtilgrrrylpgikdnnpyrkahaerqaintivQgsaadivkiatvniqkqletfhstfkshghregmlqsdcpirggffilqlhdellyevaeedvvqvaqivknemesavklsvklkvkvkigaswgelkdfdv >4x23_ABCDEFG:Histone-fold; title=CRYSTAL STRUCTURE OF CENP-C IN COMPLEX WITH THE NUCLEOSOME CORE PARTICLE organism=DROSOPHILA MELANOGASTER DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainA ( 2) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 27) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 27) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgie/dNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/srsnraglqfpvgrihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllp/esyaiyiykvlkqvhpdtgisskamsImnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgieggl/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/srsnraglqfpvgrihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllp >4x23_KLMNOPQ:Histone-fold; title=CRYSTAL STRUCTURE OF CENP-C IN COMPLEX WITH THE NUCLEOSOME CORE PARTICLE organism=DROSOPHILA MELANOGASTER DNA sequence DA(T1):DT(S147) DT(T2):DA(S146) DC(T3):DG(S145) DG(T4):DC(S144) DG(T5):DC(S143) DA(T6):DT(S142) DT(T7):DA(S141) DG(T8):DC(S140) DT(T9):DA(S139) DA(T10):DT(S138) DT(T11):DA(S137) DA(T12):DT(S136) DT(T13):DA(S135) DA(T14):DT(S134) DT(T15):DA(S133) DC(T16):DG(S132) DT(T17):DA(S131) DG(T18):DC(S130) DA(T19):DT(S129) DC(T20):DG(S128) DA(T21):DT(S127) DC(T22):DG(S126) DG(T23):DC(S125) DT(T24):DA(S124) DG(T25):DC(S123) DC(T26):DG(S122) DC(T27):DG(S121) DT(T28):DA(S120) DG(T29):DC(S119) DG(T30):DC(S118) DA(T31):DT(S117) DG(T32):DC(S116) DA(T33):DT(S115) DC(T34):DG(S114) DT(T35):DA(S113) DA(T36):DT(S112) DG(T37):DC(S111) DG(T38):DC(S110) DG(T39):DC(S109) DA(T40):DT(S108) DG(T41):DC(S107) DT(T42):DA(S106) DA(T43):DT(S105) DA(T44):DT(S104) DT(T45):DA(S103) DC(T46):DG(S102) DC(T47):DG(S101) DC(T48):DG(S100) DC(T49):DG(S99) DT(T50):DA(S98) DT(T51):DA(S97) DG(T52):DC(S96) DG(T53):DC(S95) DC(T54):DG(S94) DG(T55):DC(S93) DG(T56):DC(S92) DT(T57):DA(S91) DT(T58):DA(S90) DA(T59):DT(S89) DA(T60):DT(S88) DA(T61):DT(S87) DA(T62):DT(S86) DC(T63):DG(S85) DG(T64):DC(S84) DC(T65):DG(S83) DG(T66):DC(S82) DG(T67):DC(S81) DG(T68):DC(S80) DG(T69):DC(S79) DG(T70):DC(S78) DA(T71):DT(S77) DC(T72):DG(S76) DA(T73):DT(S75) DG(T74):DC(S74) DC(T75):DG(S73) DG(T76):DC(S72) DC(T77):DG(S71) DG(T78):DC(S70) DT(T79):DA(S69) DA(T80):DT(S68) DC(T81):DG(S67) DG(T82):DC(S66) DT(T83):DA(S65) DG(T84):DC(S64) DC(T85):DG(S63) DG(T86):DC(S62) DT(T87):DA(S61) DT(T88):DA(S60) DT(T89):DA(S59) DA(T90):DT(S58) DA(T91):DT(S57) DG(T92):DC(S56) DC(T93):DG(S55) DG(T94):DC(S54) DG(T95):DC(S53) DT(T96):DA(S52) DG(T97):DC(S51) DC(T98):DG(S50) DT(T99):DA(S49) DA(T100):DT(S48) DG(T101):DC(S47) DA(T102):DT(S46) DG(T103):DC(S45) DC(T104):DG(S44) DT(T105):DA(S43) DG(T106):DC(S42) DT(T107):DA(S41) DC(T108):DG(S40) DT(T109):DA(S39) DA(T110):DT(S38) DC(T111):DG(S37) DG(T112):DC(S36) DA(T113):DT(S35) DC(T114):DG(S34) DC(T115):DG(S33) DA(T116):DT(S32) DA(T117):DT(S31) DT(T118):DA(S30) DT(T119):DA(S29) DG(T120):DC(S28) DA(T121):DT(S27) DG(T122):DC(S26) DC(T123):DG(S25) DG(T124):DC(S24) DG(T125):DC(S23) DC(T126):DG(S22) DC(T127):DG(S21) DT(T128):DA(S20) DC(T129):DG(S19) DG(T130):DC(S18) DG(T131):DC(S17) DC(T132):DG(S16) DA(T133):DT(S15) DC(T134):DG(S14) DC(T135):DG(S13) DG(T136):DC(S12) DG(T137):DC(S11) DG(T138):DC(S10) DA(T139):DT(S9) DT(T140):DA(S8) DT(T141):DA(S7) DC(T142):DG(S6) DT(T143):DA(S5) DC(T144):DG(S4) DG(T145):DC(S3) DA(T146):DT(S2) chainK chainL chainM ( 27) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainO ( 4) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP chainQ ( 20) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgie/dniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/srsnraglqfpvgrihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkKtriiprhlqlairndeelnkllsgvtiaqggvlpniqavllp/esyaiyiykvlkqvhpdtgisskamsImnsfvndiferiaaeasrlahynkrstitsreIqtavrlllpgelakhavsegtkavtkytss/ryrPgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgieggl/dniQgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfgg/srsnraglqfpvgrihrllRkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllp >4x4b_ABCD:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 2.1 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(F1):DT(E35) DT(F2):DA(E34) DG(F3):DC(E33) DT(F4):DA(E32) DT(F5):DA(E31) DG(F6):DC(E30) DA(F7):DT(E29) DC(F8):DG(E28) DT(F9):DA(E27) DA(F10):DT(E26) DT(F11):DA(E25) DA(F12):DT(E24) DA(F13):DT(E23) DT(F14):DA(E22) DC(F15):DG(E21) DA(F16):DT(E20) DC(F17):DG(E19) DA(F18):DT(E18) DC(F19):DG(E17) DG(F20):DC(E16) DG(F21):DC(E15) DA(F22):DT(E14) DC(F23):DG(E13) DT(F24):DA(E12) DA(F25):DT(E11) DT(F26):DA(E10) DA(F27):DT(E9) DA(F28):DT(E8) DG(F29):DC(E7) DT(F30):DA(E6) DC(F31):DG(E5) DA(F32):DT(E4) DC(F33):DG(E3) DA(F34):DT(E2) DT(F35):DA(E1) chainA ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 25 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 6 1 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 1 0 0 0 0 0 chainB ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 24) GLU25 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 27 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 1 5 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk/esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk >4x4b_D:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 2.1 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(E1):DT(F35) DT(E2):DA(F34) DG(E3):DC(F33) DT(E4):DA(F32) DG(E5):DC(F31) DA(E6):DT(F30) DC(E7):DG(F29) DT(E8):DA(F28) DT(E9):DA(F27) DA(E10):DT(F26) DT(E11):DA(F25) DA(E12):DT(F24) DG(E13):DC(F23) DT(E14):DA(F22) DC(E15):DG(F21) DC(E16):DG(F20) DG(E17):DC(F19) DT(E18):DA(F18) DG(E19):DC(F17) DT(E20):DA(F16) DG(E21):DC(F15) DA(E22):DT(F14) DT(E23):DA(F13) DT(E24):DA(F12) DA(E25):DT(F11) DT(E26):DA(F10) DA(E27):DT(F9) DG(E28):DC(F8) DT(E29):DA(F7) DC(E30):DG(F6) DA(E31):DT(F5) DA(E32):DT(F4) DC(E33):DG(F3) DA(E34):DT(F2) DT(E35):DA(F1) chainD ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 27 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 5 1 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk >4x4c_ABCD:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 6.2 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(F1):DT(E35) DT(F2):DA(E34) DG(F3):DC(E33) DT(F4):DA(E32) DT(F5):DA(E31) DG(F6):DC(E30) DA(F7):DT(E29) DC(F8):DG(E28) DT(F9):DA(E27) DA(F10):DT(E26) DT(F11):DA(E25) DA(F12):DT(E24) DA(F13):DT(E23) DT(F14):DA(E22) DC(F15):DG(E21) DA(F16):DT(E20) DC(F17):DG(E19) DA(F18):DT(E18) DC(F19):DG(E17) DG(F20):DC(E16) DG(F21):DC(E15) DA(F22):DT(E14) DC(F23):DG(E13) DT(F24):DA(E12) DA(F25):DT(E11) DT(F26):DA(E10) DA(F27):DT(E9) DA(F28):DT(E8) DG(F29):DC(E7) DT(F30):DA(E6) DC(F31):DG(E5) DA(F32):DT(E4) DC(F33):DG(E3) DA(F34):DT(E2) DT(F35):DA(E1) chainA ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 25 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 6 1 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 1 0 0 0 0 0 chainB ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 24) GLU25 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 27 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 1 5 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk/esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk >4x4c_B:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 6.2 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(F1):DT(E35) DT(F2):DA(E34) DG(F3):DC(E33) DT(F4):DA(E32) DT(F5):DA(E31) DG(F6):DC(E30) DA(F7):DT(E29) DC(F8):DG(E28) DT(F9):DA(E27) DA(F10):DT(E26) DT(F11):DA(E25) DA(F12):DT(E24) DA(F13):DT(E23) DT(F14):DA(E22) DC(F15):DG(E21) DA(F16):DT(E20) DC(F17):DG(E19) DA(F18):DT(E18) DC(F19):DG(E17) DG(F20):DC(E16) DG(F21):DC(E15) DA(F22):DT(E14) DC(F23):DG(E13) DT(F24):DA(E12) DA(F25):DT(E11) DT(F26):DA(E10) DA(F27):DT(E9) DA(F28):DT(E8) DG(F29):DC(E7) DT(F30):DA(E6) DC(F31):DG(E5) DA(F32):DT(E4) DC(F33):DG(E3) DA(F34):DT(E2) DT(F35):DA(E1) chainB ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh >4x4d_A:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 10.3 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(E1):DT(F35) DT(E2):DA(F34) DG(E3):DC(F33) DT(E4):DA(F32) DG(E5):DC(F31) DA(E6):DT(F30) DC(E7):DG(F29) DT(E8):DA(F28) DT(E9):DA(F27) DA(E10):DT(F26) DT(E11):DA(F25) DA(E12):DT(F24) DG(E13):DC(F23) DT(E14):DA(F22) DC(E15):DG(F21) DC(E16):DG(F20) DG(E17):DC(F19) DT(E18):DA(F18) DG(E19):DC(F17) DT(E20):DA(F16) DG(E21):DC(F15) DA(E22):DT(F14) DT(E23):DA(F13) DT(E24):DA(F12) DA(E25):DT(F11) DT(E26):DA(F10) DA(E27):DT(F9) DG(E28):DC(F8) DT(E29):DA(F7) DC(E30):DG(F6) DA(E31):DT(F5) DA(E32):DT(F4) DC(E33):DG(F3) DA(E34):DT(F2) DT(E35):DA(F1) chainA ( 24) GLU25 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 25 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 1 6 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 1 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk >4x4d_ABCD:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 10.3 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(E1):DT(F35) DT(E2):DA(F34) DG(E3):DC(F33) DT(E4):DA(F32) DG(E5):DC(F31) DA(E6):DT(F30) DC(E7):DG(F29) DT(E8):DA(F28) DT(E9):DA(F27) DA(E10):DT(F26) DT(E11):DA(F25) DA(E12):DT(F24) DG(E13):DC(F23) DT(E14):DA(F22) DC(E15):DG(F21) DC(E16):DG(F20) DG(E17):DC(F19) DT(E18):DA(F18) DG(E19):DC(F17) DT(E20):DA(F16) DG(E21):DC(F15) DA(E22):DT(F14) DT(E23):DA(F13) DT(E24):DA(F12) DA(E25):DT(F11) DT(E26):DA(F10) DA(E27):DT(F9) DG(E28):DC(F8) DT(E29):DA(F7) DC(E30):DG(F6) DA(E31):DT(F5) DA(E32):DT(F4) DC(E33):DG(F3) DA(E34):DT(F2) DT(E35):DA(F1) chainA ( 24) GLU25 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 25 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 1 6 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 1 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 27 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 5 1 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk/esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk >4x4e_ABCD:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 14.4 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(F1):DT(E35) DT(F2):DA(E34) DG(F3):DC(E33) DT(F4):DA(E32) DT(F5):DA(E31) DG(F6):DC(E30) DA(F7):DT(E29) DC(F8):DG(E28) DT(F9):DA(E27) DA(F10):DT(E26) DT(F11):DA(E25) DA(F12):DT(E24) DA(F13):DT(E23) DT(F14):DA(E22) DC(F15):DG(E21) DA(F16):DT(E20) DC(F17):DG(E19) DA(F18):DT(E18) DC(F19):DG(E17) DG(F20):DC(E16) DG(F21):DC(E15) DA(F22):DT(E14) DC(F23):DG(E13) DT(F24):DA(E12) DA(F25):DT(E11) DT(F26):DA(E10) DA(F27):DT(E9) DA(F28):DT(E8) DG(F29):DC(E7) DT(F30):DA(E6) DC(F31):DG(E5) DA(F32):DT(E4) DC(F33):DG(E3) DA(F34):DT(E2) DT(F35):DA(E1) chainA ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 25 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 6 1 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 1 0 0 0 0 0 chainB ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 24) GLU25 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 27 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 1 5 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk/esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk >4x4e_D:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 14.4 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(F1):DT(E35) DT(F2):DA(E34) DG(F3):DC(E33) DT(F4):DA(E32) DT(F5):DA(E31) DG(F6):DC(E30) DA(F7):DT(E29) DC(F8):DG(E28) DT(F9):DA(E27) DA(F10):DT(E26) DT(F11):DA(E25) DA(F12):DT(E24) DA(F13):DT(E23) DT(F14):DA(E22) DC(F15):DG(E21) DA(F16):DT(E20) DC(F17):DG(E19) DA(F18):DT(E18) DC(F19):DG(E17) DG(F20):DC(E16) DG(F21):DC(E15) DA(F22):DT(E14) DC(F23):DG(E13) DT(F24):DA(E12) DA(F25):DT(E11) DT(F26):DA(E10) DA(F27):DT(E9) DA(F28):DT(E8) DG(F29):DC(E7) DT(F30):DA(E6) DC(F31):DG(E5) DA(F32):DT(E4) DC(F33):DG(E3) DA(F34):DT(E2) DT(F35):DA(E1) chainD ( 24) GLU25 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 27 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 1 5 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk >4x4f_ABCD:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 20.6 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(E1):DT(F35) DT(E2):DA(F34) DG(E3):DC(F33) DT(E4):DA(F32) DG(E5):DC(F31) DA(E6):DT(F30) DC(E7):DG(F29) DT(E8):DA(F28) DT(E9):DA(F27) DA(E10):DT(F26) DT(E11):DA(F25) DA(E12):DT(F24) DG(E13):DC(F23) DT(E14):DA(F22) DC(E15):DG(F21) DC(E16):DG(F20) DG(E17):DC(F19) DT(E18):DA(F18) DG(E19):DC(F17) DT(E20):DA(F16) DG(E21):DC(F15) DA(E22):DT(F14) DT(E23):DA(F13) DT(E24):DA(F12) DA(E25):DT(F11) DT(E26):DA(F10) DA(E27):DT(F9) DG(E28):DC(F8) DT(E29):DA(F7) DC(E30):DG(F6) DA(E31):DT(F5) DA(E32):DT(F4) DC(E33):DG(F3) DA(E34):DT(F2) DT(E35):DA(F1) chainA ( 24) GLU25 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 25 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 1 6 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 1 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 27 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 5 1 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk/esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk >4x4f_B:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 20.6 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(E1):DT(F35) DT(E2):DA(F34) DG(E3):DC(F33) DT(E4):DA(F32) DG(E5):DC(F31) DA(E6):DT(F30) DC(E7):DG(F29) DT(E8):DA(F28) DT(E9):DA(F27) DA(E10):DT(F26) DT(E11):DA(F25) DA(E12):DT(F24) DG(E13):DC(F23) DT(E14):DA(F22) DC(E15):DG(F21) DC(E16):DG(F20) DG(E17):DC(F19) DT(E18):DA(F18) DG(E19):DC(F17) DT(E20):DA(F16) DG(E21):DC(F15) DA(E22):DT(F14) DT(E23):DA(F13) DT(E24):DA(F12) DA(E25):DT(F11) DT(E26):DA(F10) DA(E27):DT(F9) DG(E28):DC(F8) DT(E29):DA(F7) DC(E30):DG(F6) DA(E31):DT(F5) DA(E32):DT(F4) DC(E33):DG(F3) DA(E34):DT(F2) DT(E35):DA(F1) chainB ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh >4x4g_ABCD:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 26.8 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(F1):DT(E35) DT(F2):DA(E34) DG(F3):DC(E33) DT(F4):DA(E32) DT(F5):DA(E31) DG(F6):DC(E30) DA(F7):DT(E29) DC(F8):DG(E28) DT(F9):DA(E27) DA(F10):DT(E26) DT(F11):DA(E25) DA(F12):DT(E24) DA(F13):DT(E23) DT(F14):DA(E22) DC(F15):DG(E21) DA(F16):DT(E20) DC(F17):DG(E19) DA(F18):DT(E18) DC(F19):DG(E17) DG(F20):DC(E16) DG(F21):DC(E15) DA(F22):DT(E14) DC(F23):DG(E13) DT(F24):DA(E12) DA(F25):DT(E11) DT(F26):DA(E10) DA(F27):DT(E9) DA(F28):DT(E8) DG(F29):DC(E7) DT(F30):DA(E6) DC(F31):DG(E5) DA(F32):DT(E4) DC(F33):DG(E3) DA(F34):DT(E2) DT(F35):DA(E1) chainA ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 25 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 6 1 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 1 0 0 0 0 0 chainB ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 24) GLU25 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 27 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 1 5 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk/esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk >4x4g_C:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 26.8 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(F1):DT(E35) DT(F2):DA(E34) DG(F3):DC(E33) DT(F4):DA(E32) DT(F5):DA(E31) DG(F6):DC(E30) DA(F7):DT(E29) DC(F8):DG(E28) DT(F9):DA(E27) DA(F10):DT(E26) DT(F11):DA(E25) DA(F12):DT(E24) DA(F13):DT(E23) DT(F14):DA(E22) DC(F15):DG(E21) DA(F16):DT(E20) DC(F17):DG(E19) DA(F18):DT(E18) DC(F19):DG(E17) DG(F20):DC(E16) DG(F21):DC(E15) DA(F22):DT(E14) DC(F23):DG(E13) DT(F24):DA(E12) DA(F25):DT(E11) DT(F26):DA(E10) DA(F27):DT(E9) DA(F28):DT(E8) DG(F29):DC(E7) DT(F30):DA(E6) DC(F31):DG(E5) DA(F32):DT(E4) DC(F33):DG(E3) DA(F34):DT(E2) DT(F35):DA(E1) chainC ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh >4x4h_A:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 35.7 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(E1):DT(F35) DT(E2):DA(F34) DG(E3):DC(F33) DT(E4):DA(F32) DG(E5):DC(F31) DA(E6):DT(F30) DC(E7):DG(F29) DT(E8):DA(F28) DT(E9):DA(F27) DA(E10):DT(F26) DT(E11):DA(F25) DA(E12):DT(F24) DG(E13):DC(F23) DT(E14):DA(F22) DC(E15):DG(F21) DC(E16):DG(F20) DG(E17):DC(F19) DT(E18):DA(F18) DG(E19):DC(F17) DT(E20):DA(F16) DG(E21):DC(F15) DA(E22):DT(F14) DT(E23):DA(F13) DT(E24):DA(F12) DA(E25):DT(F11) DT(E26):DA(F10) DA(E27):DT(F9) DG(E28):DC(F8) DT(E29):DA(F7) DC(E30):DG(F6) DA(E31):DT(F5) DA(E32):DT(F4) DC(E33):DG(F3) DA(E34):DT(F2) DT(E35):DA(F1) chainA ( 24) GLU25 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 25 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 1 6 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 1 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk >4x4h_ABCD:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 35.7 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(F1):DT(E35) DT(F2):DA(E34) DG(F3):DC(E33) DT(F4):DA(E32) DT(F5):DA(E31) DG(F6):DC(E30) DA(F7):DT(E29) DC(F8):DG(E28) DT(F9):DA(E27) DA(F10):DT(E26) DT(F11):DA(E25) DA(F12):DT(E24) DA(F13):DT(E23) DT(F14):DA(E22) DC(F15):DG(E21) DA(F16):DT(E20) DC(F17):DG(E19) DA(F18):DT(E18) DC(F19):DG(E17) DG(F20):DC(E16) DG(F21):DC(E15) DA(F22):DT(E14) DC(F23):DG(E13) DT(F24):DA(E12) DA(F25):DT(E11) DT(F26):DA(E10) DA(F27):DT(E9) DA(F28):DT(E8) DG(F29):DC(E7) DT(F30):DA(E6) DC(F31):DG(E5) DA(F32):DT(E4) DC(F33):DG(E3) DA(F34):DT(E2) DT(F35):DA(E1) chainA ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 25 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 6 1 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 1 0 0 0 0 0 chainB ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 24) GLU25 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 27 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 1 5 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk/esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk >4x4i_ABCD:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 44.6 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(E1):DT(F35) DT(E2):DA(F34) DG(E3):DC(F33) DT(E4):DA(F32) DG(E5):DC(F31) DA(E6):DT(F30) DC(E7):DG(F29) DT(E8):DA(F28) DT(E9):DA(F27) DA(E10):DT(F26) DT(E11):DA(F25) DA(E12):DT(F24) DG(E13):DC(F23) DT(E14):DA(F22) DC(E15):DG(F21) DC(E16):DG(F20) DG(E17):DC(F19) DT(E18):DA(F18) DG(E19):DC(F17) DT(E20):DA(F16) DG(E21):DC(F15) DA(E22):DT(F14) DT(E23):DA(F13) DT(E24):DA(F12) DA(E25):DT(F11) DT(E26):DA(F10) DA(E27):DT(F9) DG(E28):DC(F8) DT(E29):DA(F7) DC(E30):DG(F6) DA(E31):DT(F5) DA(E32):DT(F4) DC(E33):DG(F3) DA(E34):DT(F2) DT(E35):DA(F1) chainA ( 24) GLU25 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 25 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 1 6 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 1 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 24) GLU25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 27 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 5 1 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk/esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh/esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk >4x4i_C:lambda_repressor-like_DNA-binding_domains; title=RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 44.6 MGY organism=Enterobacter sp. RFL1396 DNA sequence DA(F1):DT(E35) DT(F2):DA(E34) DG(F3):DC(E33) DT(F4):DA(E32) DT(F5):DA(E31) DG(F6):DC(E30) DA(F7):DT(E29) DC(F8):DG(E28) DT(F9):DA(E27) DA(F10):DT(E26) DT(F11):DA(E25) DA(F12):DT(E24) DA(F13):DT(E23) DT(F14):DA(E22) DC(F15):DG(E21) DA(F16):DT(E20) DC(F17):DG(E19) DA(F18):DT(E18) DC(F19):DG(E17) DG(F20):DC(E16) DG(F21):DC(E15) DA(F22):DT(E14) DC(F23):DG(E13) DT(F24):DA(E12) DA(F25):DT(E11) DT(F26):DA(E10) DA(F27):DT(E9) DA(F28):DT(E8) DG(F29):DC(E7) DT(F30):DA(E6) DC(F31):DG(E5) DA(F32):DT(E4) DC(F33):DG(E3) DA(F34):DT(E2) DT(F35):DA(E1) chainC ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh >4x67_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF ELONGATING YEAST RNA POLYMERASE II STALLED AT OXIDATIVE CYCLOPURINE DNA LESIONS. organism=? DNA sequence DA(T20) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) DG(T29) chainA (330) ARG350 0 2 0 0 0 0 0 0 0 (427) GLN447 0 2 0 0 0 0 0 0 0 (812) ALA832 1 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi >4x67_AB: title=CRYSTAL STRUCTURE OF ELONGATING YEAST RNA POLYMERASE II STALLED AT OXIDATIVE CYCLOPURINE DNA LESIONS. organism=? DNA sequence DA(T20) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) DG(T29) chainA (330) ARG350 0 2 0 0 0 0 0 0 0 (427) GLN447 0 2 0 0 0 0 0 0 0 (812) ALA832 1 0 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrLdlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnThwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttPisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >4x6a_AB: title=CRYSTAL STRUCTURE OF YEAST RNA POLYMERASE II ENCOUNTERING OXIDATIVE CYCLOPURINE DNA LESIONS organism=? DNA sequence DA(T19) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) DG(T29) chainA (330) ARG350 0 0 1 0 0 0 0 0 0 0 (427) GLN447 0 1 0 0 0 0 0 0 0 0 (428) PRO448 0 3 0 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrLdlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnTHwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsr >4x9j_A:beta-beta-alpha_zinc_fingers; title=EGR-1 WITH DOUBLY METHYLATED DNA organism=Homo sapiens DNA sequence DG(B2):DC(C61) 5CM(B3):DG(C60) DG(B4):5CM(C59) DT(B5):DA(C58) DG(B6):DC(C57) DG(B7):DC(C56) DG(B8):DC(C55) 5CM(B9):DG(C54) DG(B10):5CM(C53) DT(B11):DA(C52) chainA ( 17) ARG118 0 0 0 0 0 0 0 19 12 6 ( 19) ASP120 0 0 0 0 0 0 0 2 1 3 ( 20) GLU121 0 0 0 0 0 0 5 4 0 0 ( 23) ARG124 0 0 0 0 0 5 11 4 0 0 ( 45) ARG146 0 0 0 0 14 12 3 0 0 0 ( 46) SER147 0 0 0 0 0 0 0 1 0 0 ( 47) ASP148 0 0 0 0 0 1 6 5 0 0 ( 48) HIS149 0 0 0 26 12 0 0 0 0 0 ( 51) THR152 0 0 0 1 0 0 0 0 0 0 ( 73) ARG174 0 18 12 11 0 0 0 0 0 0 ( 75) ASP176 0 0 1 5 0 0 0 0 0 0 ( 76) GLU177 1 5 0 0 0 0 0 0 0 0 ( 79) ARG180 11 6 0 0 0 0 0 0 0 0 prot.sequence erpyacpvescdrrfsRsDeltRhirihtgqkpfqcricmrnfsRsDHltthirthtgekpfacdicgrkfaRsDerkRhtkihlr >4xeg_A:Uracil-DNA_glycosylase-like; title=STRUCTURE OF THE ENZYME-PRODUCT COMPLEX RESULTING FROM TDG ACTION ON A G/HMU MISMATCH organism=Homo sapiens DNA sequence DA(D1):DT(C28) DG(D2):DC(C27) DC(D3):DG(C26) DT(D4):DA(C25) DG(D5):DC(C24) DT(D6):DA(C23) DC(D7):DG(C22) DC(D8):DG(C21) DA(D9):DT(C20) DT(D10):DA(C19) DC(D11):DG(C18) DG(D12):DC(C17) DC(D13):DG(C16) DT(D14):DA(C15) DC(D15):DG(C14) DA(D16):DT(C13) ORP(D17):DG(C12) DG(D18):DC(C11) DT(D19):DA(C10) DA(D20):DT(C9) DC(D21):DG(C8) DA(D22):DT(C7) DG(D23):DC(C6) DA(D24):DT(C5) DG(D25):DC(C4) DC(D26):DG(C3) DT(D27):DA(C2) DG(D28):DC(C1) chainA ( 29) ILE139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 90) SER200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 91) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 (163) SER273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (164) ALA274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 (165) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 11 0 0 0 0 0 0 0 0 0 0 (166) CYS276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (167) ALA277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 (168) GLN278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 (170) PRO280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnHfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgsKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARCAQfPraqdkvhyyiklkdlrdqlkgiernm >4xic_D:Homeodomain-like; title=ANTPHD WITH 15BP DI-THIOATE MODIFIED DNA DUPLEX organism=Drosophila melanogaster DNA sequence DC(F24):DG(E14) DT(F25):DA(E13) DC(F26):DG(E12) DT(F27):DA(E11) DA(F28):DT(E10) DA(F29):DT(E9) DT(F30):DA(E8) DG(F31):DC(E6) DG(F32):DG(E5) DC(F33):DA(E4) DT(F34):DA(E3) DT(F35):DA(E2) DT(F36):DG(E1) DC(F37):DA(E0) chainD ( 1) ARG5 0 0 10 8 7 0 0 0 0 0 0 0 0 0 ( 43) ILE47 0 0 0 0 0 2 4 0 0 0 0 0 0 0 ( 46) GLN50 0 0 0 0 0 0 0 8 1 0 0 0 0 0 ( 47) ASN51 0 0 0 0 3 10 0 0 0 0 0 0 0 0 prot.sequence RqtytryqtlelekefhfnryltrrrrieiahalslterqikIwfQNrrmkwkken >4xid_D:Homeodomain-like; title=ANTPHD WITH 15BP DNA DUPLEX organism=Drosophila melanogaster DNA sequence DG(E1):DC(F38) DA(E2):DT(F37) DA(E3):DT(F36) DA(E4):DT(F35) DG(E5):DC(F34) DC(E6):DG(F33) DC(E7):DG(F32) DA(E8):DT(F31) DT(E9):DA(F30) DT(E10):DA(F29) DA(E11):DT(F28) DG(E12):DC(F27) DA(E13):DT(F26) DG(E14):DC(F25) chainD ( 1) ARG5 0 0 0 0 0 0 0 0 0 4 7 15 0 0 ( 42) LYS46 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 43) ILE47 0 0 0 0 0 0 0 4 2 0 0 0 0 0 ( 46) GLN50 0 0 0 0 3 7 1 0 0 0 0 0 0 0 ( 47) ASN51 0 0 0 0 0 0 0 0 12 3 0 0 0 0 ( 50) MET54 0 0 0 0 0 1 4 0 0 0 0 0 0 0 prot.sequence RqtytryqtlelekefhfnryltrrrrieiahalslterqiKIwfQNrrMkwkken >4xiu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX STRUCTURE OF KLENOW FRAGMENT OF TAQ DNA POLYMERASE I707L MUTANT WITH DNA CONTAINING TTT OVERHANG organism=Thermus aquaticus DNA sequence DG(C205):DOC(B112) DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 0 5 4 0 0 0 0 0 0 0 (280) ARG573 9 4 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 0 1 11 1 0 0 0 0 0 0 0 0 (378) TYR671 49 0 0 0 0 0 0 0 0 0 0 0 (461) GLN754 4 0 0 0 0 0 0 0 0 0 0 0 (491) HIS784 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlkstyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlYgmsahrlsqelaipyeeaqafieryfqsfpkvrawlektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >4xln_CDF: title=CRYSTAL STRUCTURE OF T. AQUATICUS TRANSCRIPTION INITIATION COMPLEX CONTAINING BUBBLE PROMOTER AND RNA organism=THERMUS AQUATICUS DNA sequence DG(P1):DC(O48) DC(P2):DG(O47) DA(P3):DT(O46) DT(P4):DA(O45) DC(P5):DG(O43) DG(P7):DC(O42) DT(P8):DA(O41) DG(P9):DC(O40) DA(P10):DT(O39) DG(P11):DG(O38) DT(P12):DT(O37) DC(P13):DC(O36) DG(P14):DG(O35) DA(P15):DA(O34) DG(P16):DG(O33) DG(P17):DG(O32) DG(P18):DG(O31) DT(P19):DT(O30) DA(P20):DC(O29) DA(P21):DA(O28) DT(P22):DT(O27) DA(P23):DA(O26) DA(P24):DT(O25) DG(P25):DC(O24) DC(P26):DG(O23) DA(P27):DT(O22) DC(P28):DG(O21) DA(P29):DT(O20) DA(P30):DT(O19) DT(P31):DA(O18) DT(P32):DA(O17) DT(P33):DA(O16) DA(P34):DT(O15) DA(P35):DT(O14) DC(P36):DG(O13) DA(P37):DT(O12) DC(P38):DG(O11) DT(P39):DA(O10) DT(P40):DA(O9) DT(P41):DA(O8) DT(P42):DA(O7) DG(P43):DC(O6) DT(P44):DA(O5) DC(P45):DG(O4) DA(P46):DT(O3) DA(P47):DT(O2) DG(P48):DC(O1) chainC (124) ASN130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) ARG142 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) PRO170 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) TRP171 0 0 0 0 0 0 0 0 0 1 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ASN187 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ASP246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) PRO247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 19 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) LEU260 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ILE325 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ASP326 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG331 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) ARG383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) LEU418 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) GLU421 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) ASP426 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) VAL427 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (998) LYS1004 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (533) ARG534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (627) ARG628 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (704) ALA705 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (705) PRO706 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1087) THR1088 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1088) ALA1089 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 3) ASP94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) VAL96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) LEU100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) HIS101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LEU108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) GLU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ASN206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ARG208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) LEU209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) TYR217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) PHE242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ARG246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PHE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) SER251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) TYR253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) THR255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) TRP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) TRP257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) GLN260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ASN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) VAL277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) HIS278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) ILE283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) ALA326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ILE336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) ASP338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) GLU339 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) SER342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) PHE347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) LEU398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (317) THR408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 (318) ARG409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 9 0 0 0 0 (319) GLU410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 7 4 0 (320) ARG411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 (322) ARG413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (323) GLN414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 prot.sequence eikrfgrireviplpplteiqvesykkalqadvppekrenvgiqaafketfpieegglvldfleyrigdppfsqdecrekdltyqaplyarlqlihkdtglikedevflghlplmtedgsfiiNgadrvivsqihRspgvyftpdparpgryiasiiplpkrgPWidleveasgvvtmkvNkrkfplvlllrvlgydqetlvrelsaygdlvqglldeavlamrpeeamvrlftllRpgDPpkkdkalaYlfgLladpkRydlgeagrykaeeklgvglsgrtlvrfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmadqfrvglarlargvrermvmgspdtltpaklvnsRpleaalReffsrsqlsqfkdetnplsslrhkrrisalgpggLtrERagfDVrdvhrthygricpvetpeganiglitslaayarvdalgfirtpyrrvkngvvteevvymtaseedrytiaqantplegdriatdrvvarrrgepvivapeevefmdvspkqvfslntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevvkvdgtriavryedgrlvehplrryarsnqgtafdqrprvrvgqrvkkgdlladgpaseegflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegivrigaevkpgdilvgrtsfkgeqepspeerllrsifgekardvkdtslrvppgeggivvgrlrlrrgdpgvelkpgvrevvrvfvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispvfdgatepeikellaeafnlyfgkrqgegfgvdkrekevlaraeklglvspgkspeeqlkelfdlgkvvlydgrtgepfegpivvgqmfimklyhmvedKmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltiksddiegrnaayqaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtrsivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfnkyivldpkgavldgvpvekrqlltdeeyrelrygkqetyplpagvdalvkdgeevvkgqelapgvvsrmdgvalyrfprrvrvdylrkeraalriplsawvekeayrpgevlaelsepylfraeesgvvelkdlaeghliylrqeeevvaryflpagmtplvvegeivevgqplaegkgllrlprhmtakeveaeeegdsvhltlflewtepkdykvaphmnvivpegakvqagekivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevttgdrvapgdvladggkvkseiygrvevdlvrnvvrvvesydidarmgaeaiqellkeldleklerelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggRfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdavidngrrgspvtnpgserplrsltdilsgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpkrmalelfkpfllkkmeekafapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgagmafatpeealaayergevalnapivvagretsvgrlkfvfanpdeallavahglldlqdvvtvrylgrrletspgrilfarivgeavgdekvaqeliqmdvpqeknslkdlvyqaflrlgmektarlldalkyygftlsttsgitigiddavipeekqryleeadrklrqieqayemgfltdrerydqviqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcgmrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvaheivvreadcgttnyisvplfqmdevtrtlrlrkrsdiesglygrvlarevealgrrleegrylsledvhflikaaeagevrevpvrspltcqtrygvcqkcygydlsmarpvsigeavgvvaaesigepgtqltmtqglprvielfearrpkakaviseidgvvrieegedrlsvfvesegfskeyklpkdarllvkdgdyveagqpltrgaidphqlleakgpeaverylvdeiqkvyraqgvklhdkhieivvrqmlkyvevtdpgdsrllegqvlekwdvealnerliaegkvpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqrtlkaieearkeavea/tsDpVRqyLHeigqvpLLtleeEidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieaNlRLvvsiakkYtgrglsFldliqegnqgliravekFEykRrFKfSTYaTWWiRQaiNRaiadqaRtiripVHmvEtInklsRtaRqlqqelgrepsyeeiaeamgpgwdakrveetlkiAqepvsletpIgDEkdSfygdFipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLeevgayfgvTRERiRQienkalrklkyhesrtrklrdfle >4xln_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF T. AQUATICUS TRANSCRIPTION INITIATION COMPLEX CONTAINING BUBBLE PROMOTER AND RNA organism=THERMUS AQUATICUS DNA sequence DG(P1):DC(O48) DC(P2):DG(O47) DA(P3):DT(O46) DT(P4):DA(O45) DC(P5):DG(O43) DG(P7):DC(O42) DT(P8):DA(O41) DG(P9):DC(O40) DA(P10):DT(O39) DG(P11):DG(O38) DT(P12):DT(O37) DC(P13):DC(O36) DG(P14):DG(O35) DA(P15):DA(O34) DG(P16):DG(O33) DG(P17):DG(O32) DG(P18):DG(O31) DT(P19):DT(O30) DA(P20):DC(O29) DA(P21):DA(O28) DT(P22):DT(O27) DA(P23):DA(O26) DA(P24):DT(O25) DG(P25):DC(O24) DC(P26):DG(O23) DA(P27):DT(O22) DC(P28):DG(O21) DA(P29):DT(O20) DA(P30):DT(O19) DT(P31):DA(O18) DT(P32):DA(O17) DT(P33):DA(O16) DA(P34):DT(O15) DA(P35):DT(O14) DC(P36):DG(O13) DA(P37):DT(O12) DC(P38):DG(O11) DT(P39):DA(O10) DT(P40):DA(O9) DT(P41):DA(O8) DT(P42):DA(O7) DG(P43):DC(O6) DT(P44):DA(O5) DC(P45):DG(O4) DA(P46):DT(O3) DA(P47):DT(O2) DG(P48):DC(O1) chainF ( 3) ASP94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) VAL96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) LEU100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) HIS101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LEU108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) GLU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ASN206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ARG208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) LEU209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) TYR217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) PHE242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ARG246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PHE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) SER251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) TYR253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) THR255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) TRP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) TRP257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) GLN260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ASN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) VAL277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) HIS278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) ILE283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) ALA326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ILE336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) ASP338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) GLU339 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) SER342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) PHE347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) LEU398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (317) THR408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 (318) ARG409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 9 0 0 0 0 (319) GLU410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 7 4 0 (320) ARG411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 (322) ARG413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (323) GLN414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 prot.sequence tsDpVRqyLHeigqvpLLtleeEidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieaNlRLvvsiakkYtgrglsFldliqegnqgliravekFEykRrFKfSTYaTWWiRQaiNRaiadqaRtiripVHmvEtInklsRtaRqlqqelgrepsyeeiaeamgpgwdakrveetlkiAqepvsletpIgDEkdSfygdFipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLeevgayfgvTRERiRQienkalrklkyhesrtrklrdfle >4xln_IJL: title=CRYSTAL STRUCTURE OF T. AQUATICUS TRANSCRIPTION INITIATION COMPLEX CONTAINING BUBBLE PROMOTER AND RNA organism=THERMUS AQUATICUS DNA sequence DG(S1):DC(R42) DC(S2):DA(R41) DA(S3):DC(R40) DT(S4):DT(R39) DC(S5):DG(R38) DG(S7):DT(R37) DT(S8):DC(R36) DG(S9):DG(R35) DA(S10):DA(R34) DG(S11):DG(R33) DT(S12):DG(R32) DC(S13):DG(R31) DG(S14):DT(R30) DA(S15):DC(R29) DG(S16):DA(R28) DG(S17):DT(R27) DG(S18):DA(R26) DA(S24):DT(R25) DG(S25):DC(R24) DC(S26):DG(R23) DA(S27):DT(R22) DC(S28):DG(R21) DA(S29):DT(R20) DA(S30):DT(R19) DT(S31):DA(R18) DT(S32):DA(R17) DT(S33):DA(R16) DA(S34):DT(R15) DA(S35):DT(R14) DC(S36):DG(R13) DA(S37):DT(R12) DC(S38):DG(R11) DT(S39):DA(R10) DT(S40):DA(R9) DT(S41):DA(R8) DT(S42):DA(R7) DG(S43):DC(R6) DT(S44):DA(R5) DC(S45):DG(R4) DA(S46):DT(R3) DA(S47):DT(R2) DG(S48):DC(R1) chainI (136) ARG142 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) PRO170 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) TRP171 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ASN187 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ARG243 0 0 0 0 0 0 0 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ASP246 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) PRO247 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) TYR256 0 0 0 0 0 0 0 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) LEU260 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ARG266 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ILE325 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ASP326 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG331 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) LEU418 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) GLU421 0 0 0 8 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (416) ARG422 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) ASP426 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) VAL427 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (998) LYS1004 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (504) ARG628 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (581) ALA705 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (582) PRO706 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (964) THR1088 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (965) ALA1089 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 3) ASP94 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) VAL96 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG97 0 0 0 0 0 0 0 0 0 10 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) LEU100 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) HIS101 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LEU108 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) GLU114 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ASN206 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ARG208 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) LEU209 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) TYR217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) PHE224 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) PHE242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ARG246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PHE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS249 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) SER251 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) TYR253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) THR255 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) TRP256 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) TRP257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) GLN260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ASN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) VAL277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) HIS278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ILE336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) ASP338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) GLU339 0 0 0 0 0 0 0 0 0 0 0 0 0 8 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) SER342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) PHE347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) LEU398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (317) THR408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 (318) ARG409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 18 17 1 0 0 0 (319) GLU410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 7 3 0 (320) ARG411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 (322) ARG413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (323) GLN414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 prot.sequence eikrfgrireviplpplteiqvesykkalqadvppekrenvgiqaafketfpieegglvldfleyrigdppfsqdecrekdltyqaplyarlqlihkdtglikedevflghlplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpkrgPWidleveasgvvtmkvNkrkfplvlllrvlgydqetlvrelsaygdlvqglldeavlamrpeeamvrlftllRpgDPpkkdkalaYlfgLladpkRydlgeagrykaeeklgvglsgrtlvrfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmadqfrvglarlargvrermvmgspdtltpaklvnsrpleaalreffsrsqlsqfkdetnplsslrhkrrisalgpggLtrERagfDVrdvhrthygricpvetpeganiglitslaayarvdalgfirtpyrrvkngvvteevvymtaseedrytiaqantplegdriatdrvvarrrgepvivapeevefmdvspkqvfslntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevvkvdgtriavryedgrlvehplrryarsnqgtafdqrprvrvgqrvkkgdlladgpaseegflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegivrigaevkpgdilvgrtsfkgeqepspeerllrsifgekardvkdtslrvppgeggivvgrlrlrrgdpgvelkpgvrevvrvfvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispvfdgatepeikellaeafnlyfgkrqgegfgvdkrekevlaraeklglvspgkspeeqlkelfdlgkvvlydgrtgepfegpivvgqmfimklyhmvedKmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltiksddiegrnaayqaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtrsivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfnkyivldpkgavldgvpvekrqlltdeeyrelrygkqetyplpagvdalvkdgeevvkgqelapgvvsrmdgvalyrfprrvrvdyltepkdykvaphmnvivpegakvqagekivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevttgdrvapgdvladggkvkseiygrvevdlvrnvvrvvesydidarmgaeaiqellkeldleklerelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdavidngrrgspvtnpgserplrsltdilsgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpkrmalelfkpfllkkmeekafapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgagmafatpeealaayergevalnapivvagretsvgrlkfvfanpdeallavahglldlqdvvtvrylgrrletspgrilfarivgeavgdekvaqeliqmdvpqeknslkdlvyqaflrlgmektarlldalkyygftlsttsgitigiddavipeekqryleeadrklrqieqayemgfltdrerydqviqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcgmrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvaheivvreadcgttnyisvplfqmdevtrtlrlrkrsdiesglygrvlarevealgrrleegrylsledvhflikaaeagevrevpvrspltcqtrygvcqkcygydlsmarpvsigeavgvvaaesigepgtqltmtqglprvielfearrpkakaviseidgvvrieegedrlsvfvesegfskeyklpkdarllvkdgdyveagqpltrgaidphqlleakgpeaverylvdeiqkvyraqgvklhdkhieivvrqmlkyvevtdpgdsrllegqvlekwdvealnerliaegkvpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqrtlkaieearkeavea/tsDpVRqyLHeigqvpLLtleeEidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieaNlRLvvsiakkYtgrglsFldliqegnqgliravekFEykRrFKfSTYaTWWiRQaiNRaiadqartiripVHmvEtinklsrtarqlqqelgrepsyeeiaeamgpgwdakrveetlkiaqepvsletpIgDEkdSfygdFipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLeevgayfgvTRERiRQienkalrklkyhesrtrklrdfle >4xlp_CF: title=CRYSTAL STRUCTURE OF T.AQUATICUS TRANSCRIPTION INITIATION COMPLEX CONTAINING UPSTREAM FORK PROMOTER organism=THERMUS AQUATICUS DNA sequence DA(P1):DT(O25) DG(P2):DC(O24) DC(P3):DG(O23) DA(P4):DT(O22) DC(P5):DG(O21) DA(P6):DT(O20) DA(P7):DT(O19) DT(P8):DA(O18) DT(P9):DA(O17) DT(P10):DA(O16) DA(P11):DT(O15) DA(P12):DT(O14) DC(P13):DG(O13) DA(P14):DT(O12) DC(P15):DG(O11) DT(P16):DA(O10) DT(P17):DA(O9) DT(P18):DA(O8) DT(P19):DA(O7) DG(P20):DC(O6) DT(P21):DA(O5) DC(P22):DG(O4) DA(P23):DT(O3) DA(P24):DT(O2) DG(P25):DC(O1) chainC chainF (163) TRP256 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) TRP257 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ARG259 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) GLN260 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ASN263 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG264 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) VAL277 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) HIS278 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) GLU281 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) LEU398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 (315) THR408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 (316) ARG409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5 1 0 0 0 (317) GLU410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 11 6 0 (318) ARG411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 (320) ARG413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 (321) GLN414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 prot.sequence eikrfgrireviplpplteiqvesykkalqadvppekrenvgiqaafketfpieegglvldfleyrigdppfsqdecrekdltyqaplyarlqlihkdtglikedevflghlplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidleveasgvvtmkvnkrkfplvlllrvlgydqetlvrelsaygdlvqglldeavlamrpeeamvrlftllrpgdppkkdkalaylfglladpkrydlgeagrykaeeklgvglsgrtlvrfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmadqfrvglarlargvrermvmgspdtltpaklvnsrpleaalreffsrsqlsqfkdetnplsslrhkrrisalgpggltreragfdvrdvhrthygricpvetpeganiglitslaayarvdalgfirtpyrrvkngvvteevvymtaseedrytiaqantplegdriatdrvvarrrgepvivapeevefmdvspkqvfslntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevvkvdgtriavryedgrlvehplrryarsnqgtafdqrprvrvgqrvkkgdlladgpaseegflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegivrigaevkpgdilvgrtsfkgeqepspeerllrsifgekardvkdtslrvppgeggivvgrlrlrrgdpgvelkpgvrevvrvfvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispvfdgatepeikellaeafnlyfgkrqgegfgvdkrekevlaraeklglvspgkspeeqlkelfdlgkvvlydgrtgepfegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltiksddiegrnaayqaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/dpvrqylheigqvplltleeeidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatWWiRQaiNRaiadqartiripVHmvEtinklsrtarqlqqelgrepsyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLeevgayfgvTRERiRQienkalrklkyhesrtrklrdfle >4xlp_IL: title=CRYSTAL STRUCTURE OF T.AQUATICUS TRANSCRIPTION INITIATION COMPLEX CONTAINING UPSTREAM FORK PROMOTER organism=THERMUS AQUATICUS DNA sequence DC(R1):DG(S25) DT(R2):DA(S24) DT(R3):DA(S23) DG(R4):DC(S22) DA(R5):DT(S21) DC(R6):DG(S20) DA(R7):DT(S19) DA(R8):DT(S18) DA(R9):DT(S17) DA(R10):DT(S16) DG(R11):DC(S15) DT(R12):DA(S14) DG(R13):DC(S13) DT(R14):DA(S12) DT(R15):DA(S11) DA(R16):DT(S10) DA(R17):DT(S9) DA(R18):DT(S8) DT(R19):DA(S7) DT(R20):DA(S6) DG(R21):DC(S5) DT(R22):DA(S4) DG(R23):DC(S3) DC(R24):DG(S2) DT(R25):DA(S1) chainI chainL (163) TRP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (164) TRP257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 (167) GLN260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 5 (170) ASN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (171) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 (184) VAL277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (185) HIS278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (188) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (305) LEU398 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) THR408 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG409 0 0 0 1 13 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU410 0 4 9 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG411 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG413 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN414 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eikrfgrireviplpplteiqvesykkalqadvppekrenvgiqaafketfpieegglvldfleyrigdppfsqdecrekdltyqaplyarlqlihkdtglikedevflghlplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidleveasgvvtmkvnkrkfplvlllrvlgydqetlvrelsaygdlvqglldeavlamrpeeamvrlftllrpgdppkkdkalaylfglladpkrydlgeagrykaeeklgvglsgrtlvrfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmadqfrvglarlargvrermvmgspdtltpaklvnsrpleaalreffsrsqlsqfkdetnplsslrhkrrisalgpggltreragfdvrdvhrthygricpvetpeganiglitslaayarvdalgfirtpyrrvkngvvteevvymtaseedrytiaqantplegdriatdrvvarrrgepvivapeevefmdvspkqvfslntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevvkvdgtriavryedgrlvehplrryarsnqgtafdqrprvrvgqrvkkgdlladgpaseegflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegivrigaevkpgdilvgrtsfkgeqepspeerllrsifgekardvkdtslrvppgeggivvgrlrlrrgdpgvelkpgvrevvrvfvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispvfdgatepeikellaeafnlyfgkrqgegfgvdkrekevlaraeklglvspgkspeeqlkelfdlgkvvlydgrtgepfegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltiksddiegrnaayqaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/dpvrqylheigqvplltleeeidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatWWirQaiNRaiadqartiripVHmvEtinklsrtarqlqqelgrepsyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLeevgayfgvTRERiRQienkalrklkyhesrtrklrdfle >4xlp_L:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF T.AQUATICUS TRANSCRIPTION INITIATION COMPLEX CONTAINING UPSTREAM FORK PROMOTER organism=THERMUS AQUATICUS DNA sequence DC(R1):DG(S25) DT(R2):DA(S24) DT(R3):DA(S23) DG(R4):DC(S22) DA(R5):DT(S21) DC(R6):DG(S20) DA(R7):DT(S19) DA(R8):DT(S18) DA(R9):DT(S17) DA(R10):DT(S16) DG(R11):DC(S15) DT(R12):DA(S14) DG(R13):DC(S13) DT(R14):DA(S12) DT(R15):DA(S11) DA(R16):DT(S10) DA(R17):DT(S9) DA(R18):DT(S8) DT(R19):DA(S7) DT(R20):DA(S6) DG(R21):DC(S5) DT(R22):DA(S4) DG(R23):DC(S3) DC(R24):DG(S2) DT(R25):DA(S1) chainL (163) TRP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (164) TRP257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 (167) GLN260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 5 (170) ASN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (171) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 (184) VAL277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (185) HIS278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (188) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (305) LEU398 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) THR408 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG409 0 0 0 1 13 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU410 0 4 9 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG411 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG413 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN414 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dpvrqylheigqvplltleeeidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatWWirQaiNRaiadqartiripVHmvEtinklsrtarqlqqelgrepsyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLeevgayfgvTRERiRQienkalrklkyhesrtrklrdfle >4xlq_CF: title=CRYSTAL STRUCTURE OF T.AQUATICUS TRANSCRIPTION INITIATION COMPLEX CONTAINING UPSTREAM FORK (-11 BASE-PAIRED) PROMOTER organism=THERMUS AQUATICUS DNA sequence DC(O1):DG(P26) DT(O2):DA(P25) DT(O3):DA(P24) DG(O4):DC(P23) DA(O5):DT(P22) DC(O6):DG(P21) DA(O7):DT(P20) DA(O8):DT(P19) DA(O9):DT(P18) DA(O10):DT(P17) DG(O11):DC(P16) DT(O12):DA(P15) DG(O13):DC(P14) DT(O14):DA(P13) DT(O15):DA(P12) DA(O16):DT(P11) DA(O17):DT(P10) DA(O18):DT(P9) DT(O19):DA(P8) DT(O20):DA(P7) DG(O21):DC(P6) DT(O22):DA(P5) DG(O23):DC(P4) DC(O24):DG(P3) DT(O25):DA(P2) chainC chainF (124) TYR217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (163) TRP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 (164) TRP257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 (166) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (167) GLN260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 15 7 (170) ASN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (171) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 7 0 0 (184) VAL277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (185) HIS278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 7 0 0 0 0 (188) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 (305) LEU398 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) GLU399 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) THR408 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG409 0 0 0 0 14 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU410 0 2 9 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG411 15 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG413 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN414 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eikrfgrireviplpplteiqvesykkalqadvppekrenvgiqaafketfpieegglvldfleyrigdppfsqdecrekdltyqaplyarlqlihkdtglikedevflghlplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidleveasgvvtmkvnkrkfplvlllrvlgydqetlvrelsaygdlvqglldeavlamrpeeamvrlftllrpgdppkkdkalaylfglladpkrydlgeagrykaeeklgvglsgrtlvrfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmadqfrvglarlargvrermvmgspdtltpaklvnsrpleaalreffsrsqlsqfkdetnplsslrhkrrisalgpggltreragfdvrdvhrthygricpvetpeganiglitslaayarvdalgfirtpyrrvkngvvteevvymtaseedrytiaqantplegdriatdrvvarrrgepvivapeevefmdvspkqvfslntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevvkvdgtriavryedgrlvehplrryarsnqgtafdqrprvrvgqrvkkgdlladgpaseegflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegivrigaevkpgdilvgrtsfkgeqepspeerllrsifgekardvkdtslrvppgeggivvgrlrlrrgdpgvelkpgvrevvrvfvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispvfdgatepeikellaeafnlyfgkrqgegfgvdkrekevlaraeklglvspgkspeeqlkelfdlgkvvlydgrtgepfegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltiksddiegrnaayqaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/dpvrqylheigqvplltleeeidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieanlrlvvsiakkYtgrglsfldliqegnqgliravekfeykrrfkfstyatWWiRQaiNRaiadqartiripVHmvEtinklsrtarqlqqelgrepsyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLEevgayfgvTRERiRQienkalrklkyhesrtrklrdfle >4xlq_IL: title=CRYSTAL STRUCTURE OF T.AQUATICUS TRANSCRIPTION INITIATION COMPLEX CONTAINING UPSTREAM FORK (-11 BASE-PAIRED) PROMOTER organism=THERMUS AQUATICUS DNA sequence DC(R1):DG(S26) DT(R2):DA(S25) DT(R3):DA(S24) DG(R4):DC(S23) DA(R5):DT(S22) DC(R6):DG(S21) DA(R7):DT(S20) DA(R8):DT(S19) DA(R9):DT(S18) DA(R10):DT(S17) DG(R11):DC(S16) DT(R12):DA(S15) DG(R13):DC(S14) DT(R14):DA(S13) DT(R15):DA(S12) DA(R16):DT(S11) DA(R17):DT(S10) DA(R18):DT(S9) DT(R19):DA(S8) DT(R20):DA(S7) DG(R21):DC(S6) DT(R22):DA(S5) DG(R23):DC(S4) DC(R24):DG(S3) DT(R25):DA(S2) chainI chainL (163) TRP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 (164) TRP257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 (166) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (167) GLN260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 5 (170) ASN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (171) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 (184) VAL277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (185) HIS278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 0 0 0 0 (188) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 (305) LEU398 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) GLU399 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) THR408 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG409 0 0 0 1 12 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU410 0 6 10 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG411 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG413 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN414 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eikrfgrireviplpplteiqvesykkalqadvppekrenvgiqaafketfpieegglvldfleyrigdppfsqdecrekdltyqaplyarlqlihkdtglikedevflghlplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidleveasgvvtmkvnkrkfplvlllrvlgydqetlvrelsaygdlvqglldeavlamrpeeamvrlftllrpgdppkkdkalaylfglladpkrydlgeagrykaeeklgvglsgrtlvrfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmadqfrvglarlargvrermvmgspdtltpaklvnsrpleaalreffsrsqlsqfkdetnplsslrhkrrisalgpggltreragfdvrdvhrthygricpvetpeganiglitslaayarvdalgfirtpyrrvkngvvteevvymtaseedrytiaqantplegdriatdrvvarrrgepvivapeevefmdvspkqvfslntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevvkvdgtriavryedgrlvehplrryarsnqgtafdqrprvrvgqrvkkgdlladgpaseegflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegivrigaevkpgdilvgrtsfkgeqepspeerllrsifgekardvkdtslrvppgeggivvgrlrlrrgdpgvelkpgvrevvrvfvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispvfdgatepeikellaeafnlyfgkrqgegfgvdkrekevlaraeklglvspgkspeeqlkelfdlgkvvlydgrtgepfegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltiksddiegrnaayqaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/dpvrqylheigqvplltleeeidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatWWiRQaiNRaiadqartiripVHmvEtinklsrtarqlqqelgrepsyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLEevgayfgvTRERiRQienkalrklkyhesrtrklrdfle >4xlq_L:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF T.AQUATICUS TRANSCRIPTION INITIATION COMPLEX CONTAINING UPSTREAM FORK (-11 BASE-PAIRED) PROMOTER organism=? DNA sequence DC(R1):DG(S26) DT(R2):DA(S25) DT(R3):DA(S24) DG(R4):DC(S23) DA(R5):DT(S22) DC(R6):DG(S21) DA(R7):DT(S20) DA(R8):DT(S19) DA(R9):DT(S18) DA(R10):DT(S17) DG(R11):DC(S16) DT(R12):DA(S15) DG(R13):DC(S14) DT(R14):DA(S13) DT(R15):DA(S12) DA(R16):DT(S11) DA(R17):DT(S10) DA(R18):DT(S9) DT(R19):DA(S8) DT(R20):DA(S7) DG(R21):DC(S6) DT(R22):DA(S5) DG(R23):DC(S4) DC(R24):DG(S3) DT(R25):DA(S2) chainL (163) TRP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 (164) TRP257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 (166) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (167) GLN260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 5 (170) ASN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (171) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 (184) VAL277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (185) HIS278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 0 0 0 0 (188) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 (305) LEU398 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) GLU399 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) THR408 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG409 0 0 0 1 12 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU410 0 6 10 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG411 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG413 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN414 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dpvrqylheigqvplltleeeidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatWWiRQaiNRaiadqartiripVHmvEtinklsrtarqlqqelgrepsyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLEevgayfgvTRERiRQienkalrklkyhesrtrklrdfle >4xlr_CDFM: title=CRYSTAL STRUCTURE OF T.AQUATICUS TRANSCRIPTION INITIATION COMPLEX WITH CARD CONTAINING BUBBLE PROMOTER AND RNA organism=THERMUS THERMOPHILUS JL-18 / THERMUS AQUATICUS DNA sequence DC(O1):DG(P48) DT(O2):DA(P47) DT(O3):DA(P46) DG(O4):DC(P45) DA(O5):DT(P44) DC(O6):DG(P43) DA(O7):DT(P42) DA(O8):DT(P41) DA(O9):DT(P40) DA(O10):DT(P39) DG(O11):DC(P38) DT(O12):DA(P37) DG(O13):DC(P36) DT(O14):DA(P35) DT(O15):DA(P34) DA(O16):DT(P33) DA(O17):DT(P32) DA(O18):DT(P31) DT(O19):DA(P30) DT(O20):DA(P29) DG(O21):DC(P28) DT(O22):DA(P27) DG(O23):DC(P26) DC(O24):DG(P25) DT(O25):DA(P24) DA(O26):DA(P23) DT(O27):DT(P22) DA(O28):DA(P21) DC(O29):DA(P20) DT(O30):DT(P19) DG(O31):DG(P18) DG(O32):DG(P17) DG(O33):DG(P16) DA(O34):DA(P15) DG(O35):DG(P14) DC(O36):DC(P13) DT(O37):DT(P12) DG(O38):DG(P11) DT(O39):DA(P10) DC(O40):DG(P9) DA(O41):DT(P8) DC(O42):DG(P7) DG(O43):DC(P6) DG(O44):DC(P5) DA(O45):DT(P4) DT(O46):DA(P3) DG(O47):DC(P2) chainC ( 86) ASP87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (162) ILE163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (165) PRO166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (166) LYS167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (169) PRO170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (170) TRP171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 (186) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 1 0 0 0 0 0 0 0 0 0 0 (242) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 1 0 0 0 0 0 0 0 0 0 0 0 0 (245) ASP246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) PRO247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 (259) LEU260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (265) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (325) ASP326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (330) ARG331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 (417) LEU418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 (420) GLU421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (421) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (426) VAL427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (708) GLU709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (815) LYS816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (816) PRO817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (998) HIS999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (1003) LYS1004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 chainD (533) ARG534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (627) ARG628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (704) ALA705 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (705) PRO706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 (1087) THR1088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 (1088) ALA1089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 chainF ( 3) VAL96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LEU100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) HIS101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LEU108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ASN206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) LEU209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TYR217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) ARG220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) PHE242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) GLU243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) PHE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) SER251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) TYR253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) THR255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) TRP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) TRP257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) GLN260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ASN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) VAL277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) HIS278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) GLN327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ILE336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ASP338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) GLU339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) SER342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) PHE347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) LEU398 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) GLU399 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG409 0 0 0 0 6 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU410 0 8 3 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG411 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG413 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN414 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 84) TRP86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eikrfgrireviplpplteiqvesykkalqadvppekrenvgiqaafketfpieegdkgkgglvldfleyrigdppfsqdecrekDltyqaplyarlqlihkdtglikedevflghlplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiIplPKrgPWidleveasgvvtmkvNkrkfplvlllrvlgydqetlvrelsaygdlvqglldeavlamrpeeamvrlftllRpgDPpkkdkalaYlfgLladpkRydlgeagrykaeeklgvglsgrtlvrfedgefkdevflptlrylfaltagvpghevddiDhlgnRrirtvgelmadqfrvglarlargvrermvmgspdtltpaklvnsrpleaalreffsrsqlsqfkdetnplsslrhkrrisalgpggLtrERagfdVrdvhrthygricpvetpeganiglitslaayarvdalgfirtpyrrvkngvvteevvymtaseedrytiaqantplegdriatdrvvarrrgepvivapeevefmdvspkqvfslntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevvkvdgtriavryedgrlvehplrryarsnqgtafdqrprvrvgqrvkkgdlladgpaseegflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryEieardtklgperitrdiphlseaalrdldeegivrigaevkpgdilvgrtsfkgeqepspeerllrsifgekardvkdtslrvppgeggivvgrlrlrrgdpgvelKPgvrevvrvfvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispvfdgatepeikellaeafnlyfgkrqgegfgvdkrekevlaraeklglvspgkspeeqlkelfdlgkvvlydgrtgepfegpivvgqmfimklyHmvedKmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltiksddiegrnaayqaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtrsivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfnkyivldpkgavldgvpvekrqlltdeeyrelrygkqetyplpagvdalvkdgeevvkgqelapgvvsrmdgvalyrfprrvrvdylrkeraalriplsawvekeayrpgevlaelsepylfraeesgvvelkdlaeghliylrqeeevvaryflpagmtplvvegeivevgqplaegkgllrlprhmtakeveaeeegdsvhltlflewtepkdykvaphmnvivpegakvqagekivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevttgdrvapgdvladggkvkseiygrvevdlvrnvvrvvesydidarmgaeaiqellkeldleklerelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggRfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdavidngrrgspvtnpgserplrsltdilsgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpkrmalelfkpfllkkmeekafapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgagmafatpeealaayergevalnapivvagretsvgrlkfvfanpdeallavahglldlqdvvtvrylgrrletspgrilfarivgeavgdekvaqeliqmdvpqeknslkdlvyqaflrlgmektarlldalkyygftlsttsgitigiddavipeekqryleeadrklrqieqayemgfltdrerydqviqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcgmrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvaheivvreadcgttnyisvplfqmdevtrtlrlrkrsdiesglygrvlarevealgrrleegrylsledvhflikaaeagevrevpvrspltcqtrygvcqkcygydlsmarpvsigeavgvvaaesigepgtqltmtqglprvielfearrpkakaviseidgvvrieegedrlsvfvesegfskeyklpkdarllvkdgdyveagqpltrgaidphqlleakgpeaverylvdeiqkvyraqgvklhdkhieivvrqmlkyvevtdpgdsrllegqvlekwdvealnerliaegkvpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqrtlkaieearkeavea/dpVRqyLHeigqvpLLtleeEidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieaNlRLvvsiakkYtgRglsFldliqegnqgliravekFEykRrFKfSTYaTWWirQaiNRaiadqartiripVHmvEtinklsrtaRqlqqelgrepsyeeiaeamgpgwdakrveetlkiaQepvsletpIgDEkdSfygdFipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLEevgayfgvtRERiRQienkalrklkyhesrtrklrdfle/efrpgdkvvlppygvgvvagiaqrsvsgvsrayyqvdfpgsrskayvpveaphsvglrkalapeevpvildllkngrmplpkqWaarhRktseiladgnpyriaqmagqlraweverglpdldrqalrraihllaeevaqsleitvqeakrlfeeawg >4xlr_IJLN: title=CRYSTAL STRUCTURE OF T.AQUATICUS TRANSCRIPTION INITIATION COMPLEX WITH CARD CONTAINING BUBBLE PROMOTER AND RNA organism=THERMUS AQUATICUS / THERMUS THERMOPHILUS JL-18 DNA sequence DC(R1):DG(S48) DT(R2):DA(S47) DT(R3):DA(S46) DG(R4):DC(S45) DA(R5):DT(S44) DC(R6):DG(S43) DA(R7):DT(S42) DA(R8):DT(S41) DA(R9):DT(S40) DA(R10):DT(S39) DG(R11):DC(S38) DT(R12):DA(S37) DG(R13):DC(S36) DT(R14):DA(S35) DT(R15):DA(S34) DA(R16):DT(S33) DA(R17):DT(S32) DA(R18):DT(S31) DT(R19):DA(S30) DT(R20):DA(S29) DG(R21):DC(S28) DT(R22):DA(S27) DG(R23):DC(S26) DC(R24):DG(S25) DT(R25):DA(S24) DA(R26):DA(S23) DT(R27):DT(S22) DA(R28):DA(S21) DC(R29):DA(S20) DT(R30):DT(S19) DG(R31):DG(S18) DG(R32):DG(S17) DG(R33):DG(S16) DA(R34):DA(S15) DG(R35):DG(S14) DC(R36):DC(S13) DT(R37):DT(S12) DG(R38):DG(S11) DT(R39):DA(S10) DC(R40):DG(S9) DA(R41):DT(S8) DC(R42):DG(S7) DG(R43):DC(S6) DG(R44):DC(S5) DA(R45):DT(S4) DT(R46):DA(S3) DG(R47):DC(S2) chainI ( 86) ASP87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (162) ILE163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (165) PRO166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (166) LYS167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (169) PRO170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (170) TRP171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (186) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 1 0 0 0 0 0 0 0 0 0 0 (242) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ASP246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) PRO247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 (259) LEU260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (265) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (325) ASP326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (330) ARG331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 (373) ASN374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (376) PRO377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (417) LEU418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 (420) GLU421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (421) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (426) VAL427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (708) GLU709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (815) LYS816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (816) PRO817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1003) LYS1004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (410) ARG534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (504) ARG628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (581) ALA705 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 (582) PRO706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (964) THR1088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (965) ALA1089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 chainL ( 3) VAL96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LEU100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) HIS101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LEU108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ASN206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) LEU209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) ARG220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) PHE242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) GLU243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) PHE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) SER251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) TYR253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) THR255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) TRP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) TRP257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) GLN260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ASN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) VAL277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) HIS278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) GLN327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ILE336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ASP338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) GLU339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) SER342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) PHE347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) LEU398 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) GLU399 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) THR408 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG409 0 0 0 1 18 17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU410 0 5 6 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG411 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG413 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN414 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 84) TRP86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eikrfgrireviplpplteiqvesykkalqadvppekrenvgiqaafketfpieegdkgkgglvldfleyrigdppfsqdecrekDltyqaplyarlqlihkdtglikedevflghlplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiIplPKrgPWidleveasgvvtmkvNkrkfplvlllrvlgydqetlvrelsaygdlvqglldeavlamrpeeamvrlftllRpgDPpkkdkalaYlfgLladpkRydlgeagrykaeeklgvglsgrtlvrfedgefkdevflptlrylfaltagvpghevddiDhlgnRrirtvgelmadqfrvglarlargvrermvmgspdtltpaklvNsrPleaalreffsrsqlsqfkdetnplsslrhkrrisalgpggLtrERagfdVrdvhrthygricpvetpeganiglitslaayarvdalgfirtpyrrvkngvvteevvymtaseedrytiaqantplegdriatdrvvarrrgepvivapeevefmdvspkqvfslntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevvkvdgtriavryedgrlvehplrryarsnqgtafdqrprvrvgqrvkkgdlladgpaseegflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryEieardtklgperitrdiphlseaalrdldeegivrigaevkpgdilvgrtsfkgeqepspeerllrsifgekardvkdtslrvppgeggivvgrlrlrrgdpgvelKPgvrevvrvfvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispvfdgatepeikellaeafnlyfgkrqgegfgvdkrekevlaraeklglvspgkspeeqlkelfdlgkvvlydgrtgepfegpivvgqmfimklyhmvedKmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltiksddiegrnaayqaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtrsivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfnkyivldpkgavldgvpvekrqlltdeeyrelrygkqetyplpagvdalvkdgeevvkgqelapgvvsrmdgvalyrfprrvrvdyltepkdykvaphmnvivpegakvqagekivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevttgdrvapgdvladggkvkseiygrvevdlvrnvvrvvesydidarmgaeaiqellkeldleklerelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggRfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdavidngrrgspvtnpgserplrsltdilsgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpkrmalelfkpfllkkmeekafapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgagmafatpeealaayergevalnapivvagretsvgrlkfvfanpdeallavahglldlqdvvtvrylgrrletspgrilfarivgeavgdekvaqeliqmdvpqeknslkdlvyqaflrlgmektarlldalkyygftlsttsgitigiddavipeekqryleeadrklrqieqayemgfltdrerydqviqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcgmrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvaheivvreadcgttnyisvplfqmdevtrtlrlrkrsdiesglygrvlarevealgrrleegrylsledvhflikaaeagevrevpvrspltcqtrygvcqkcygydlsmarpvsigeavgvvaaesigepgtqltmtqglprvielfearrpkakaviseidgvvrieegedrlsvfvesegfskeyklpkdarllvkdgdyveagqpltrgaidphqlleakgpeaverylvdeiqkvyraqgvklhdkhieivvrqmlkyvevtdpgdsrllegqvlekwdvealnerliaegkvpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqrtlkaieearkeavea/dpVRqyLHeigqvpLLtleeEidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieaNlRLvvsiakkytgRglsFldliqegnqgliravekFEykRrFKfSTYaTWWirQaiNRaiadqartiripVHmvEtinklsrtaRqlqqelgrepsyeeiaeamgpgwdakrveetlkiaQepvsletpIgDEkdSfygdFipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLEevgayfgvTRERiRQienkalrklkyhesrtrklrdfle/efrpgdkvvlppygvgvvagiaqrsvsgvsrayyqvdfpgsrskayvpveaphsvglrkalapeevpvildllkngrmplpkqWaarhRktseiladgnpyriaqmagqlraweverglpdldrqalrraihllaeevaqsleitvqeakrlfeeawg >4xlr_L:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF T.AQUATICUS TRANSCRIPTION INITIATION COMPLEX WITH CARD CONTAINING BUBBLE PROMOTER AND RNA organism=? DNA sequence DC(R1):DG(S48) DT(R2):DA(S47) DT(R3):DA(S46) DG(R4):DC(S45) DA(R5):DT(S44) DC(R6):DG(S43) DA(R7):DT(S42) DA(R8):DT(S41) DA(R9):DT(S40) DA(R10):DT(S39) DG(R11):DC(S38) DT(R12):DA(S37) DG(R13):DC(S36) DT(R14):DA(S35) DT(R15):DA(S34) DA(R16):DT(S33) DA(R17):DT(S32) DA(R18):DT(S31) DT(R19):DA(S30) DT(R20):DA(S29) DG(R21):DC(S28) DT(R22):DA(S27) DG(R23):DC(S26) DC(R24):DG(S25) DT(R25):DA(S24) DA(R26):DA(S23) DT(R27):DT(S22) DA(R28):DA(S21) DC(R29):DA(S20) DT(R30):DT(S19) DG(R31):DG(S18) DG(R32):DG(S17) DG(R33):DG(S16) DA(R34):DA(S15) DG(R35):DG(S14) DC(R36):DC(S13) DT(R37):DT(S12) DG(R38):DG(S11) DT(R39):DA(S10) DC(R40):DG(S9) DA(R41):DT(S8) DC(R42):DG(S7) DG(R43):DC(S6) DG(R44):DC(S5) DA(R45):DT(S4) DT(R46):DA(S3) DG(R47):DC(S2) chainL ( 3) VAL96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LEU100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) HIS101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LEU108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ASN206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) LEU209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) ARG220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) PHE242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) GLU243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) PHE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) SER251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) TYR253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) THR255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) TRP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) TRP257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) GLN260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ASN263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) VAL277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) HIS278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) GLN327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ILE336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ASP338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) GLU339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) SER342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) PHE347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) LEU398 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) GLU399 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) THR408 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG409 0 0 0 1 18 17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU410 0 5 6 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG411 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG413 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN414 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dpVRqyLHeigqvpLLtleeEidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieaNlRLvvsiakkytgRglsFldliqegnqgliravekFEykRrFKfSTYaTWWirQaiNRaiadqartiripVHmvEtinklsrtaRqlqqelgrepsyeeiaeamgpgwdakrveetlkiaQepvsletpIgDEkdSfygdFipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLEevgayfgvTRERiRQienkalrklkyhesrtrklrdfle >4xls_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF T. AQUATICUS TRANSCRIPTION INITIATION COMPLEX WITH CARD CONTAINING UPSTREAM FORK PROMOTER. organism=? DNA sequence DC(O1):DG(P25) DT(O2):DA(P24) DT(O3):DA(P23) DG(O4):DC(P22) DA(O5):DT(P21) DC(O6):DG(P20) DA(O7):DT(P19) DA(O8):DT(P18) DA(O9):DT(P17) DA(O10):DT(P16) DG(O11):DC(P15) DT(O12):DA(P14) DG(O13):DC(P13) DT(O14):DA(P12) DT(O15):DA(P11) DA(O16):DT(P10) DA(O17):DT(P9) DA(O18):DT(P8) DT(O19):DA(P7) DT(O20):DA(P6) DG(O21):DC(P5) DT(O22):DA(P4) DG(O23):DC(P3) DC(O24):DG(P2) chainF (164) TRP257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (167) GLN260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (171) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 4 (184) VAL277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (185) HIS278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 (305) LEU398 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) GLU399 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) THR408 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG409 0 0 0 0 13 14 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU410 0 6 9 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG411 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG413 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN414 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dpvrqylheigqvplltleeeidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwWirQainRaiadqartiripVHmvetinklsrtarqlqqelgrepsyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLEevgayfgvTRERiRQienkalrklkyhesrtrklrdfle >4xls_FM: title=CRYSTAL STRUCTURE OF T. AQUATICUS TRANSCRIPTION INITIATION COMPLEX WITH CARD CONTAINING UPSTREAM FORK PROMOTER. organism=THERMUS AQUATICUS / THERMUS THERMOPHILUS JL-18 DNA sequence DC(O1):DG(P25) DT(O2):DA(P24) DT(O3):DA(P23) DG(O4):DC(P22) DA(O5):DT(P21) DC(O6):DG(P20) DA(O7):DT(P19) DA(O8):DT(P18) DA(O9):DT(P17) DA(O10):DT(P16) DG(O11):DC(P15) DT(O12):DA(P14) DG(O13):DC(P13) DT(O14):DA(P12) DT(O15):DA(P11) DA(O16):DT(P10) DA(O17):DT(P9) DA(O18):DT(P8) DT(O19):DA(P7) DT(O20):DA(P6) DG(O21):DC(P5) DT(O22):DA(P4) DG(O23):DC(P3) DC(O24):DG(P2) chainF (164) TRP257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (167) GLN260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (171) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 4 (184) VAL277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (185) HIS278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 (305) LEU398 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) GLU399 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) THR408 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG409 0 0 0 0 13 14 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU410 0 6 9 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG411 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG413 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN414 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM prot.sequence dpvrqylheigqvplltleeeidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwWirQainRaiadqartiripVHmvetinklsrtarqlqqelgrepsyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLEevgayfgvTRERiRQienkalrklkyhesrtrklrdfle/efrpgdkvvlppygvgvvagiaqrsvsgvsrayyqvdfpgsrskayvpveaphsvglrkalapeevpvildllkngrmplpkqwaarhrktseiladgnpyriaqmagqlraweverglpdldrqalrraihllaeevaqsleitvqeakrlfeeawgeeln >4xls_LN: title=CRYSTAL STRUCTURE OF T. AQUATICUS TRANSCRIPTION INITIATION COMPLEX WITH CARD CONTAINING UPSTREAM FORK PROMOTER. organism=THERMUS THERMOPHILUS JL-18 / THERMUS AQUATICUS DNA sequence DG(S2):DC(R24) DC(S3):DG(R23) DA(S4):DT(R22) DC(S5):DG(R21) DA(S6):DT(R20) DA(S7):DT(R19) DT(S8):DA(R18) DT(S9):DA(R17) DT(S10):DA(R16) DA(S11):DT(R15) DA(S12):DT(R14) DC(S13):DG(R13) DA(S14):DT(R12) DC(S15):DG(R11) DT(S16):DA(R10) DT(S17):DA(R9) DT(S18):DA(R8) DT(S19):DA(R7) DG(S20):DC(R6) DT(S21):DA(R5) DC(S22):DG(R4) DA(S23):DT(R3) DA(S24):DT(R2) DG(S25):DC(R1) chainL (164) TRP257 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) GLN260 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG264 4 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) VAL277 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) HIS278 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) GLU281 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) LEU398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (306) GLU399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (315) THR408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 (316) ARG409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 17 20 0 0 0 0 (317) GLU410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 9 8 0 (318) ARG411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 (320) ARG413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (321) GLN414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 chainN prot.sequence dpvrqylheigqvplltleeeidlarkveegmeaikklseatgldqelirevvrakilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwWirQainRaiadqartiripVHmvEtinklsrtarqlqqelgrepsyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdenlpspveaaaqsllseelekalsklsereamvlklrkglidgrehtLEevgayfgvTRERiRQienkalrklkyhesrtrklrdfle/efrpgdkvvlppygvgvvagiaqrsvsgvsrayyqvdfpgsrskayvpveaphsvglrkalapeevpvildllkngrmplpkqwaarhrktseiladgnpyriaqmagqlraweverglpdldrqalrraihllaeevaqsleitvqeakrlfeeawgeeln >4xo0_A:DNA/RNA_polymerases; title=CRYSTAL STRUCTURE OF 5'-CTTATPPTAZZATAAG IN A HOST-GUEST COMPLEX organism=Moloney murine leukemia virus (isolate Shinnick) / Moloney murine leukemia virus (isolate Shinnick) DNA sequence DA(G9):DT(B8) DA(G12):DT(B5) DT(G13):DA(B4) DA(G14):DT(B3) DA(G15):DT(B2) DG(G16):DC(B1) chainA ( 41) TYR64 0 0 0 0 0 1 ( 76) LEU99 0 0 0 0 0 16 ( 82) VAL112 0 0 0 0 0 1 ( 84) ASP114 0 0 0 0 0 11 ( 86) ARG116 0 0 0 3 9 7 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvyrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >4xpc_A:DNA/RNA_polymerases; title=CRYSTAL STRUCTURE OF 5'- CTTATAAATTTATAAG IN A HOST-GUEST COMPLEX organism=Moloney murine leukemia virus (isolate Shinnick) / Moloney murine leukemia virus (isolate Shinnick) DNA sequence DC(B1):DG(G16) DT(B2):DA(G15) DT(B3):DA(G14) DA(B4):DT(G13) DT(B5):DA(G12) DA(B6):DT(G11) DA(B7):DT(G10) DA(B8):DT(G9) chainA ( 41) TYR64 6 0 0 0 0 0 0 0 ( 76) LEU99 22 0 0 0 0 0 0 0 ( 77) PRO100 1 0 0 0 0 0 0 0 ( 78) VAL101 2 0 0 0 0 0 0 0 ( 86) ASP114 12 0 0 0 0 0 0 0 ( 88) ARG116 7 9 3 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLPVkdyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpesgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >4xpe_A:DNA/RNA_polymerases; title=CRYSTAL STRUCTURE OF 5'-CTTATGGGCCCATAAG IN A HOST-GUEST COMPLEX organism=Moloney murine leukemia virus (isolate Shinnick) / Moloney murine leukemia virus (isolate Shinnick) DNA sequence DC(B1):DG(G16) DT(B2):DA(G15) DT(B3):DA(G14) DA(B4):DT(G13) DT(B5):DA(G12) DG(B6):DC(G11) DG(B7):DC(G10) DG(B8):DC(G9) chainA ( 41) TYR64 1 0 0 0 0 0 0 0 ( 76) LEU99 20 0 0 0 0 0 0 0 ( 77) PRO100 4 0 0 0 0 0 0 0 ( 78) VAL101 3 0 0 0 0 0 0 0 ( 84) VAL112 1 0 0 0 0 0 0 0 ( 86) ASP114 11 0 0 0 0 0 0 0 ( 88) ARG116 7 8 3 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLPVkdyrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpsgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >4xq8_B:Nucleotidyltransferase;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE LAMBDA- MGDATP BINARY COMPLEX AND COMPLEX WITH 6 PAIRED DNA organism=Homo sapiens DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) chainB (136) GLN464 0 0 1 0 0 0 (177) TYR505 0 0 0 0 8 6 (182) ALA510 0 0 0 0 0 7 (185) ASN513 0 0 0 0 0 6 (186) ARG514 0 0 0 0 0 16 (189) ARG517 0 0 0 0 4 12 prot.sequence sesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsQeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >4xqj_A: title=CRYSTAL STRUCTURE OF AGRA LYTTR DOMAIN IN COMPLEX WITH PROMOTERS organism=Staphylococcus aureus (strain COL) / Staphylococcus aureus (strain COL) DNA sequence DA(C2):DT(B16) DT(C3):DA(B15) DT(C4):DA(B14) DC(C5):DG(B13) DT(C6):DA(B12) DT(C7):DA(B11) DA(C8):DT(B10) DA(C9):DT(B9) DC(C10):DG(B8) DT(C11):DA(B7) DG(C12):DC(B6) DT(C13):DA(B5) chainA ( 29) SER168 0 0 4 1 2 0 0 0 0 0 0 0 ( 30) HIS169 0 4 10 11 13 0 0 0 0 0 0 0 ( 31) ARG170 0 1 0 0 0 0 0 0 0 0 0 0 ( 44) TYR183 7 1 0 0 0 0 0 0 0 0 0 0 ( 93) VAL232 0 0 0 0 0 0 0 0 0 0 0 3 ( 94) ARG233 0 0 0 0 0 0 0 0 0 11 12 4 prot.sequence vetielkrgsnsvyvqyddimffesstkSHRliahldnrqiefYgnlkelsqlddrffrchNsfvvnrhniesidskerivyfknkehcyasVRnvkki >4xqk_A:S-adenosyl-L-methionine-dependent_methyltransferases;P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=ATP-DEPENDENT TYPE ISP RESTRICTION-MODIFICATION ENZYME LLABIII BOUND TO DNA organism=LACTOCOCCUS LACTIS SUBSP. CREMORIS DNA sequence DG(d1):DC(c28) DC(d2):DG(c27) DT(d3):DA(c26) DC(d4):DG(c25) DT(d5):DA(c24) DA(d6):DT(c23) DG(d7):DC(c22) DC(d8):DG(c21) DT(d9):DA(c20) DA(d10):DT(c19) DA(d11):DT(c18) DT(d12):DA(c17) DA(d13):DT(c16) DG(d14):DC(c15) DA(d15):DT(c14) DC(d16):DG(c13) DT(d17):DA(c12) DG(d18):DC(c11) DA(d19):DT(c10) DG(d20):DC(c9) DC(d21):DG(c8) DC(d22):DG(c7) DG(d23):DC(c6) DA(d24):DT(c5) DG(d25):DC(c4) DG(d26):DC(c3) DT(d27):DA(c2) DG(d28):DC(c1) chainA (350) LYS385 0 0 2 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (807) VAL867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 (958) ASN1018 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 (960) PRO1020 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (961) TYR1021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0 0 0 0 0 0 0 0 0 (964) LYS1024 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 6 0 0 0 0 0 0 0 0 (966) LYS1026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (995) THR1055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (996) ASN1056 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 15 3 0 0 0 0 0 0 (998) ASN1058 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 5 0 0 0 0 0 0 (1058) ILE1118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (1059) ARG1119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 (1063) LYS1123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (1074) PHE1134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 (1076) ILE1136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (1077) MET1137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 (1171) LYS1231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 (1218) ARG1278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (1258) ASP1318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 (1259) ARG1319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 12 19 0 0 0 0 0 (1261) TYR1321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 (1300) ASN1360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 0 0 0 0 0 0 0 0 0 prot.sequence kqtfddlinqintgtlfekltlaylkneptykalyqnvwllsevpesygipvdlvaeqkngdlvaiqakfytnkvgkseinsfvaelgksyyqrglivstmddwnsnaretidqnekgieiiglsdlrnsqidwsqfnferpenvvvkkpkklrdyqqtakenalahfkendrgqlimapgtgktftslkisealskdkdgpfkvlylvpsiqlltqtlrgwnndteltmtsmavtstedikasdigypattsskkilqnwhdfeslpkqtdmlvvfstyqsievigeaqkegfpefdfiisdeahrttgaheaakeasafskvhsnnnvkglkrmyqtatpkiygesaKknakdksillssmddeskygevffrmgfgqavsrdiltdykvmvlavdeaaiqkdmqrtladpenglniddvgrivgiwngmmrrngykknspydgapleraiaftrtieeskkvssqfeevvneyisihlsmrhadgqmnalqkgevldwlanpnkpadearivsnvrfltegidiptldaviflspkksqvdivqavgrimrkaegkdygyiilpiviptgekpetildnnknyetvwqvinalrsvderfeamidklnmakpkqlkvigvgsspdtelefewdkfegaifgkivqkvgdrkylenwskdvakiaerqinwiknklsdkkdpislefkkfvsslqhnindsidekqaaemlsqhlitkpifealfseysfvnqnpvsqamesivselekagfakeqenleplyesvrmraegiekaedkqkiivtlydkffktafkatterlgiVftpievvdfivhsvddvlkkhfgkslaskdvhildpftgtgtfivrtltylkeqmdageisladitrkfmkelhaneivllsyyiaainiestfdeingdeegyvpfegivltdtfestetedtldddyfgtnderlkrqqkvpitvimgNpPYsaKqKnedgnqirttyekldaslqnswvetstaTNkNnlfdsyiramrwssdrisdngvigfitnnsfidgnamdgmrqslleefsdiyvlnlkggIRgktKdqsaleggniFdIMtgvtiimlikksdytvegrihyldignnldkyqkleklknwkslngatsefqniipnekgdwinqrnsnfdelislgnkkgsdslfidytgglKtgrdnwswnfskeqvelsmkssidyynqylgdtniykedvpdiswtRslkqrferretqswqgermylgmyrpftkkhvyyaqawiDRqYqmtkvlpsstssnlmislsnktggkqfstlivdvlpdvNlftggsqnlpkylyrnndtgnlfdnsekysairhevlnklpnlseedamyyvyglfhsiqygkvyyedlaksfpkipnvkhkekyikigkeladlhlnyenqpicegidvqiselnyrvkkmkhpkkgvldtiiynesitiknipekayeyvvngrpaiewiinqyqvktdkksgitddpnefsddpkyilnlllsvitvsmrtlelidelpefeiq >4xqk_AB:S-adenosyl-L-methionine-dependent_methyltransferases;P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=ATP-DEPENDENT TYPE ISP RESTRICTION-MODIFICATION ENZYME LLABIII BOUND TO DNA organism=LACTOCOCCUS LACTIS SUBSP. CREMORIS DNA sequence DG(d1):DC(c28) DC(d2):DG(c27) DT(d3):DA(c26) DC(d4):DG(c25) DT(d5):DA(c24) DA(d6):DT(c23) DG(d7):DC(c22) DC(d8):DG(c21) DT(d9):DA(c20) DA(d10):DT(c19) DA(d11):DT(c18) DT(d12):DA(c17) DA(d13):DT(c16) DG(d14):DC(c15) DA(d15):DT(c14) DC(d16):DG(c13) DT(d17):DA(c12) DG(d18):DC(c11) DA(d19):DT(c10) DG(d20):DC(c9) DC(d21):DG(c8) DC(d22):DG(c7) DG(d23):DC(c6) DA(d24):DT(c5) DG(d25):DC(c4) DG(d26):DC(c3) DT(d27):DA(c2) DG(d28):DC(c1) chainA (350) LYS385 0 0 2 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (807) VAL867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 (958) ASN1018 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 (960) PRO1020 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (961) TYR1021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0 0 0 0 0 0 0 0 0 (964) LYS1024 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 6 0 0 0 0 0 0 0 0 (966) LYS1026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (995) THR1055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (996) ASN1056 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 15 3 0 0 0 0 0 0 (998) ASN1058 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 5 0 0 0 0 0 0 (1058) ILE1118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (1059) ARG1119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 (1063) LYS1123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (1074) PHE1134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 (1076) ILE1136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (1077) MET1137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 (1171) LYS1231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 (1218) ARG1278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (1258) ASP1318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 (1259) ARG1319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 12 19 0 0 0 0 0 (1261) TYR1321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 (1300) ASN1360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 0 0 0 0 0 0 0 0 0 chainB prot.sequence kqtfddlinqintgtlfekltlaylkneptykalyqnvwllsevpesygipvdlvaeqkngdlvaiqakfytnkvgkseinsfvaelgksyyqrglivstmddwnsnaretidqnekgieiiglsdlrnsqidwsqfnferpenvvvkkpkklrdyqqtakenalahfkendrgqlimapgtgktftslkisealskdkdgpfkvlylvpsiqlltqtlrgwnndteltmtsmavtstedikasdigypattsskkilqnwhdfeslpkqtdmlvvfstyqsievigeaqkegfpefdfiisdeahrttgaheaakeasafskvhsnnnvkglkrmyqtatpkiygesaKknakdksillssmddeskygevffrmgfgqavsrdiltdykvmvlavdeaaiqkdmqrtladpenglniddvgrivgiwngmmrrngykknspydgapleraiaftrtieeskkvssqfeevvneyisihlsmrhadgqmnalqkgevldwlanpnkpadearivsnvrfltegidiptldaviflspkksqvdivqavgrimrkaegkdygyiilpiviptgekpetildnnknyetvwqvinalrsvderfeamidklnmakpkqlkvigvgsspdtelefewdkfegaifgkivqkvgdrkylenwskdvakiaerqinwiknklsdkkdpislefkkfvsslqhnindsidekqaaemlsqhlitkpifealfseysfvnqnpvsqamesivselekagfakeqenleplyesvrmraegiekaedkqkiivtlydkffktafkatterlgiVftpievvdfivhsvddvlkkhfgkslaskdvhildpftgtgtfivrtltylkeqmdageisladitrkfmkelhaneivllsyyiaainiestfdeingdeegyvpfegivltdtfestetedtldddyfgtnderlkrqqkvpitvimgNpPYsaKqKnedgnqirttyekldaslqnswvetstaTNkNnlfdsyiramrwssdrisdngvigfitnnsfidgnamdgmrqslleefsdiyvlnlkggIRgktKdqsaleggniFdIMtgvtiimlikksdytvegrihyldignnldkyqkleklknwkslngatsefqniipnekgdwinqrnsnfdelislgnkkgsdslfidytgglKtgrdnwswnfskeqvelsmkssidyynqylgdtniykedvpdiswtRslkqrferretqswqgermylgmyrpftkkhvyyaqawiDRqYqmtkvlpsstssnlmislsnktggkqfstlivdvlpdvNlftggsqnlpkylyrnndtgnlfdnsekysairhevlnklpnlseedamyyvyglfhsiqygkvyyedlaksfpkipnvkhkekyikigkeladlhlnyenqpicegidvqiselnyrvkkmkhpkkgvldtiiynesitiknipekayeyvvngrpaiewiinqyqvktdkksgitddpnefsddpkyilnlllsvitvsmrtlelidelpefeiq/qtfddlinqigtlfekltlaylkneptykalyqnvwllsevdlvaeqkngdlvaiqakfytnkkseinsfvaelgksyyqrglivstmddwnsnaretieiiglsdlrnsqidwsqfnfpenvvvkkpkklrdyqqtakenalahfkendrgqlimapgtgktftslkisealskdkdgpfkvlylvpsiqlltqtlrgwnndteltmtsmavttedikasdigypattsskkilqnwhdfeslpkqtdmlvvfstyqsievigeaqkegfpefdfiisdeahrttgaheaakeasafskvhsnnnvkglkrmyqtatpkiygesakknakdksillssmddeskygevFfrmgfgqavsrdiltdykvmvlavdeaaiqkdmqrtladpenglniddvgrivgiwngmmrrngypydgapleraiaftrtieeskkvssqfeevvnesihlsmrhadgqmnalqkgevldwlanpnkpadearivsnvrfltegidiptldaviflspkksqvdivqavgrimrkaegkdygyiilpiviptgekpetildnnknyetvwqvinalrsvderfeamidklnmakpkqlkvigvgsstelefewdkfegaifgkivqkvgdrkylenwskdvakiaerqinwiknklsdkkdpislefkkfvsslqhnindsidekqaaemlsqhlitkpifealfseysfvnqnpvsqamesivselekagfakeqenleplyesvrmraegiekaedkqkiivtlydkffktafkatterlgivftpievvdfivhsvddvlkkhfgkslaskdVhildpftgtgtfivrtltylkeqmdageisladitrkfmkelhaneivllsyyiaainiestfdeingdeegyvpfegivltdtfestetedtldddyfgtnderlkrqqkvpitvimgnppysakqknedgnqirttyekldaslqnswVeTStaTnKnnlfdsyiramrwssdrisdngvigfitNNsFidgnamdgmrqslleefsdiyvlnlkggirgktkdqsaleggnifdimtgvtiimlikkSDytvEgrihyldignNlDKyqkleklknwkslngatsefqniipnekgdwinqrnsnfdelislgnkkgsdslfidytgglktgrdnwswnfskeqvelsmkssidyynqylGdtniykedvpdiswtrslkqrferretqswqgermylgmyrpftkkHvyyaqawidrqyqmtkvlpsstssnlmislsnktggkqfSTlIvdvlpdvnlftggsqnlpkylyrnndtgnlnsekysaiRhevlnklpnlseedamyyvyglfhsiqygkvyyedlaksfpkipnvkhkekyikigkeladlhlnyenqpicegidvqiselnyrvkkmkhpkkgvldtiiynesitiknipekayeyvvngrpaiewiinqyqvktdkksgitddpnefsddpkyilnlllsvitvsmrtlelidelpefeiq >4xqn_G: title=CRYSTAL STRUCTURE OF AGRA LYTTR DOMAIN IN COMPLEX WITH PROMOTERS organism=Staphylococcus aureus (strain COL) / Staphylococcus aureus (strain COL) DNA sequence DA(I2):DT(H16) DT(I3):DA(H15) DT(I4):DA(H14) DC(I5):DG(H13) DT(I6):DA(H12) DT(I7):DA(H11) DA(I8):DT(H10) DA(I9):DT(H9) DC(I10):DG(H8) DT(I11):DA(H7) DG(I12):DC(H6) DT(I13):DA(H5) chainG ( 28) SER168 0 0 4 1 2 0 0 0 0 0 0 0 ( 29) HIS169 0 3 9 11 14 0 0 0 0 0 0 0 ( 30) ARG170 0 2 0 0 0 0 0 0 0 0 0 0 ( 43) TYR183 7 1 0 0 0 0 0 0 0 0 0 0 ( 92) VAL232 0 0 0 0 0 0 0 0 0 0 0 3 ( 93) ARG233 0 0 0 0 0 0 0 0 0 11 14 4 prot.sequence etielkrgsnsvyvqyddimffesstkSHRliahldnrqiefYgnlkelsqlddrffrchNsfvvnrhniesidskerivyfknkehcyasVRnvkki >4xr0_A:Replication_terminator_protein_Tus; title=ESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN (TUS) COMPLEXED WITH DNA- G/T MISMATCH. organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DA(B312):DT(C341) DG(B313):DC(C340) DT(B314):DA(C339) DT(B315):DA(C338) DA(B316):DT(C337) DC(B317):DG(C336) DA(B318):DT(C335) DA(B319):DT(C334) DC(B320):DG(C333) DA(B321):DT(C332) DT(B322):DA(C331) DA(B323):DT(C330) DG(B324):DT(C329) chainA ( 88) LYS89 0 0 0 0 0 0 0 0 1 4 7 0 0 ( 92) ARG93 0 0 0 0 0 0 1 0 0 0 0 0 0 (135) THR136 0 0 0 0 0 0 0 0 0 0 1 0 0 (152) LEU153 0 0 0 0 0 0 0 0 1 0 0 0 0 (172) ALA173 0 0 1 0 0 0 0 0 0 0 0 0 0 (174) LYS175 0 0 3 9 9 5 0 0 0 0 0 0 0 (176) ILE177 0 0 0 0 0 0 3 3 0 0 0 0 0 (177) ILE178 0 0 0 0 1 3 0 0 0 0 0 0 0 (231) ARG232 0 0 0 0 0 0 0 0 5 22 0 0 0 (233) VAL234 0 0 0 0 0 0 4 4 0 0 0 0 0 (236) GLN237 0 0 0 0 0 0 6 0 0 0 0 0 0 (238) ILE239 0 2 1 0 0 0 0 0 0 0 0 0 0 (240) ARG241 6 4 0 0 0 0 0 0 0 0 0 0 0 (249) GLN250 8 4 0 0 0 0 0 0 0 0 0 0 0 (251) GLN252 0 3 7 7 1 0 0 0 0 0 0 0 0 (253) ALA254 0 0 0 0 0 1 0 0 0 0 0 0 0 (287) ARG288 3 0 0 0 0 0 0 0 0 0 0 0 0 (288) TYR289 9 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence arydlvdrlnttfrqmeqelaifaahleqhkllvarvfslpevkkedehnplnrievkqhlgndaqslalrhfrhlfiqqqsenrssKaavRlpgvlcyqvdnlsqaalvshiqhinklkttfehivtveselpTaarfewvhrhlpglitLnayrtltvlhdpatlrfgwAnKhIIknlhrdevlaqlekslksprsvapwtreewqrklereyqdiaalpqnaklkikRpVkvQpIaRvwykgdqkQvQhAcptplialinrdngagvpdvgellnydadnvqhRYkpqaqplrliiprlhlyvad >4xr1_A:Replication_terminator_protein_Tus; title=ESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN (TUS) COMPLEXED WITH DNA- AG/AT MISMATCH. organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DA(C331):DT(B322) DT(C332):DA(B321) DG(C333):DC(B320) DT(C334):DA(B319) DT(C335):DA(B318) DG(C336):DC(B317) DT(C337):DA(B316) DA(C338):DT(B315) DA(C339):DT(B314) DC(C340):DG(B313) DT(C341):DA(B312) chainA ( 87) LYS89 6 3 0 0 0 0 0 0 0 0 0 ( 91) ARG93 0 0 0 0 1 0 0 0 0 0 0 (134) THR136 1 0 0 0 0 0 0 0 0 0 0 (151) LEU153 0 0 2 0 0 0 0 0 0 0 0 (171) ALA173 0 0 0 0 0 0 0 0 1 0 0 (173) LYS175 0 0 0 0 0 4 9 11 2 0 0 (175) ILE177 0 0 0 8 4 0 0 0 0 0 0 (176) ILE178 0 0 0 0 0 2 1 0 0 0 0 (230) ARG232 0 29 12 0 0 0 0 0 0 0 0 (232) VAL234 0 0 0 5 4 0 0 0 0 0 0 (235) GLN237 0 0 0 0 3 0 0 0 0 0 0 (237) ILE239 0 0 0 0 0 0 0 0 1 2 0 (239) ARG241 0 0 0 0 0 0 0 0 0 3 5 (248) GLN250 0 0 0 0 0 0 0 0 0 5 14 (250) GLN252 0 0 0 0 0 0 2 8 6 3 0 (252) ALA254 0 0 0 0 0 1 0 0 0 0 0 (286) ARG288 0 0 0 0 0 0 0 0 0 0 2 (287) TYR289 0 0 0 0 0 0 0 0 0 4 6 (289) PRO291 0 0 0 0 0 0 0 0 1 0 0 prot.sequence rydlvdrlnttfrqmeqelaifaahleqhkllvarvfslpevkkedehnplnrievkqhlgndaqslalrhfrhlfiqqqsenrssKaavRlpgvlcyqvdnlsqaalvshiqhinklkttfehivtveselpTaarfewvhrhlpglitLnayrtltvlhdpatlrfgwAnKhIIknlhrdevlaqlekslksprsvapwtreewqrklereyqdiaalpqnaklkikRpVkvQpIaRvwykgdqkQvQhAcptplialinrdngagvpdvgellnydadnvqhRYkPqaqplrliiprlhlyvad >4xr2_A:Replication_terminator_protein_Tus; title=ESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN (TUS) H114A MUTANT COMPLEXED WITH DNA- TERA LOCK. organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DA(C329):DC(B324) DT(C330):DA(B323) DA(C331):DT(B322) DT(C332):DA(B321) DG(C333):DC(B320) DT(C334):DA(B319) DT(C335):DA(B318) DG(C336):DC(B317) DT(C337):DA(B316) DA(C338):DT(B315) DA(C339):DT(B314) DC(C340):DG(B313) DT(C341):DA(B312) chainA ( 85) LYS89 0 0 6 4 1 0 0 0 0 0 0 0 0 ( 89) ARG93 0 0 0 0 0 0 1 0 0 0 0 0 0 (132) THR136 0 0 1 0 0 0 0 0 0 0 0 0 0 (149) LEU153 0 0 0 0 1 0 0 0 0 0 0 0 0 (169) ALA173 0 0 0 0 0 0 0 0 0 0 1 0 0 (171) LYS175 0 0 0 0 0 0 0 6 9 10 1 0 0 (173) ILE177 0 0 0 0 0 6 3 0 0 0 0 0 0 (174) ILE178 0 0 0 0 0 0 0 4 0 0 0 0 0 (228) ARG232 0 0 0 22 11 0 0 0 0 0 0 0 0 (230) VAL234 0 0 0 0 0 4 4 0 0 0 0 0 0 (233) GLN237 0 0 0 0 0 0 3 0 0 0 0 0 0 (235) ILE239 0 0 0 0 0 0 0 0 0 0 1 2 0 (237) ARG241 0 0 0 0 0 0 0 0 0 0 0 4 5 (246) GLN250 0 0 0 0 0 0 0 0 0 0 0 5 12 (248) GLN252 0 0 0 0 0 0 0 0 2 7 6 1 0 (250) ALA254 0 0 0 0 0 0 0 1 0 0 0 0 0 (284) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 4 (285) TYR289 0 0 0 0 0 0 0 0 0 0 0 4 8 prot.sequence dlvdrlnttfrqmeqelaifaahleqhkllvarvfslpevkkedehnplnrievkqhlgndaqslalrhfrhlfiqqqsenrssKaavRlpgvlcyqvdnlsqaalvshiqhinklkttfehivtveselpTaarfewvarhlpglitLnayrtltvlhdpatlrfgwAnKhIIknlhrdevlaqlekslksprsvapwtreewqrklereyqdiaalpqnaklkikRpVkvQpIaRvwykgdqkQvQhAcptplialinrdngagvpdvgellnydadnvqhRYkpqaqplrliiprlhlyvad >4xr3_A:Replication_terminator_protein_Tus; title=ESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN (TUS) COMPLEXED WITH DNA- GC(6) SWAPPED. organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DA(B312):DT(C341) DG(B313):DC(C340) DT(B314):DA(C339) DT(B315):DA(C338) DA(B316):DT(C337) DC(B317):DG(C336) DA(B318):DT(C335) DA(B319):DT(C334) DC(B320):DG(C333) DA(B321):DT(C332) DT(B322):DA(C331) DA(B323):DT(C330) DG(B324):DC(C329) DT(B325):DA(C328) chainA ( 85) LYS89 0 0 0 0 0 0 0 0 2 4 8 0 0 0 ( 89) ARG93 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (132) THR136 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (133) ALA137 0 0 0 0 0 0 0 0 0 0 0 0 2 2 (149) LEU153 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (169) ALA173 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (171) LYS175 0 0 2 10 9 4 0 0 0 0 0 0 0 0 (173) ILE177 0 0 0 0 0 0 3 3 0 0 0 0 0 0 (174) ILE178 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (194) ARG198 0 0 0 0 0 0 0 0 0 0 0 0 3 5 (228) ARG232 0 0 0 0 0 0 0 0 7 28 0 0 0 0 (230) VAL234 0 0 0 0 0 0 3 4 0 0 0 0 0 0 (233) GLN237 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (235) ILE239 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (237) ARG241 8 4 0 0 0 0 0 0 0 0 0 0 0 0 (246) GLN250 14 5 0 0 0 0 0 0 0 0 0 0 0 0 (248) GLN252 0 2 7 8 2 0 0 0 0 0 0 0 0 0 (250) ALA254 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (284) ARG288 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TYR289 7 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dlvdrlnttfrqmeqelaifaahleqhkllvarvfslpevkkedehnplnrievkqhlgndaqslalrhfrhlfiqqqsenrssKaavRlpgvlcyqvdnlsqaalvshiqhinklkttfehivtveselpTAarfewvhrhlpglitLnayrtltvlhdpatlrfgwAnKhIIknlhrdevlaqlekslkspRsvapwtreewqrklereyqdiaalpqnaklkikRpVkvQpIaRvwykgdqkQvQhAcptplialinrdngagvpdvgellnydadnvqhRYkpqaqplrliiprlhlyvad >4xrh_B:Nucleotidyltransferase;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE LAMBDA- MGDTTP BINARY AND COMPLEX WITH 6 PAIRED DNA organism=Homo sapiens DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) chainB (177) TYR505 0 0 0 0 8 6 (182) ALA510 0 0 0 0 0 7 (185) ASN513 0 0 0 0 0 6 (186) ARG514 0 0 0 0 0 15 (189) ARG517 0 0 0 0 3 13 prot.sequence sesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >4xrm_AB:Homeodomain-like; title=HOMODIMER OF TALE TYPE HOMEOBOX TRANSCRIPTION FACTOR MEIS1 COMPLEXES WITH SPECIFIC DNA organism=Homo sapiens DNA sequence DG(M2):DC(L37) DC(M3):DG(L36) DT(M4):DA(L35) DG(M5):DC(L34) DA(M6):DT(L33) DC(M7):DG(L32) DA(M8):DT(L31) DG(M9):DC(L30) DC(M10):DG(L29) DT(M11):DA(L28) DG(M12):DC(L27) DT(M13):DA(L26) DC(M14):DG(L25) DA(M15):DT(L24) DA(M16):DT(L23) DG(M17):DC(L22) chainA ( 44) ASN321 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 47) ILE324 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 ( 48) ASN325 0 0 0 0 0 0 0 0 0 0 0 10 5 0 0 0 ( 51) ARG328 0 0 0 0 0 0 0 0 0 10 13 7 0 0 0 0 ( 52) ARG329 0 0 0 0 0 0 0 0 0 0 0 4 13 10 0 0 chainB ( 47) ASN321 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 50) ILE324 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 ( 51) ASN325 0 0 0 3 11 1 0 0 0 0 0 0 0 0 0 0 ( 54) ARG328 0 0 0 0 7 13 10 0 0 0 0 0 0 0 0 0 ( 55) ARG329 0 0 13 14 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ifpkvatnimrawlfqhlthpypseeqkkqlaqdtgltilqvnNwfINarRRivqpmid/smgifpkvatnimrawlfqhlthpypseeqkkqlaqdtgltilqvnNwfINarRRivqpmidqs >4xrm_B:Homeodomain-like; title=HOMODIMER OF TALE TYPE HOMEOBOX TRANSCRIPTION FACTOR MEIS1 COMPLEXES WITH SPECIFIC DNA organism=Homo sapiens DNA sequence DC(L22):DG(M17) DT(L23):DA(M16) DT(L24):DA(M15) DG(L25):DC(M14) DA(L26):DT(M13) DC(L27):DG(M12) DA(L28):DT(M11) DG(L29):DC(M10) DC(L30):DG(M9) DT(L31):DA(M8) DG(L32):DC(M7) DT(L33):DA(M6) DC(L34):DG(M5) DA(L35):DT(M4) DG(L36):DC(M3) DC(L37):DG(M2) chainB ( 47) ASN321 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 50) ILE324 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 ( 51) ASN325 0 0 0 0 0 0 0 0 0 0 1 11 3 0 0 0 ( 54) ARG328 0 0 0 0 0 0 0 0 0 10 13 7 0 0 0 0 ( 55) ARG329 0 0 0 0 0 0 0 0 0 0 0 4 14 13 0 0 prot.sequence smgifpkvatnimrawlfqhlthpypseeqkkqlaqdtgltilqvnNwfINarRRivqpmidqs >4xrs_BI:Homeodomain-like; title=HETERODIMERIC COMPLEX OF TRANSCRIPTION FACTORS MEIS1 AND DLX3 ON SPECIFIC DNA organism=HOMO SAPIENS DNA sequence DG(E1):DC(D36) DT(E2):DA(D35) DT(E3):DA(D34) DG(E4):DC(D33) DA(E5):DT(D32) DC(E6):DG(D31) DA(E7):DT(D30) DG(E8):DC(D29) DG(E9):DC(D28) DA(E10):DT(D27) DT(E11):DA(D26) DA(E12):DT(D25) DA(E13):DT(D24) DT(E14):DA(D23) DT(E15):DA(D22) DG(E16):DC(D21) DT(E17):DA(D20) chainB ( 43) ASN321 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN325 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG328 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainI ( 3) ARG133 0 0 0 0 0 0 0 0 2 10 10 4 0 0 0 0 0 ( 49) ASN179 0 0 0 0 0 0 0 0 0 0 1 18 0 0 0 0 0 prot.sequence fpkvatnimrawlfqhlthpypseeqkkqlaqdtgltilqvnNwfiNarRrivqpmid/kpRtiyssyqlaalqrrfqkaqylalperaelaaqlgltqtqvkiwfqNrrskfkk >4xrs_G:Homeodomain-like; title=HETERODIMERIC COMPLEX OF TRANSCRIPTION FACTORS MEIS1 AND DLX3 ON SPECIFIC DNA organism=HOMO SAPIENS DNA sequence DC(M21):DG(L16) DA(M22):DT(L15) DA(M23):DT(L14) DT(M24):DA(L13) DT(M25):DA(L12) DA(M26):DT(L11) DT(M27):DA(L10) DC(M28):DG(L9) DC(M29):DG(L8) DT(M30):DA(L7) DG(M31):DC(L6) DT(M32):DA(L5) DC(M33):DG(L4) DA(M34):DT(L3) DA(M35):DT(L2) chainG ( 3) ARG133 0 0 0 0 11 12 12 3 0 0 0 0 0 0 0 ( 45) ILE175 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 49) ASN179 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 prot.sequence kpRtiyssyqlaalqrrfqkaqylalperaelaaqlgltqtqvkIwfqNrrskfkk >4xuj_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE CONTAINING ADDUCTS FROM TREATMENT WITH A THIOMORPHOLINE-SUBSTITUTED [(ETA-6-P-CYMENE)RU(3-HYDROXY-2- PYRIDONE)CL] COMPOUND organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstelliRkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4xuj_F:Histone-fold; title=NUCLEOSOME CORE PARTICLE CONTAINING ADDUCTS FROM TREATMENT WITH A THIOMORPHOLINE-SUBSTITUTED [(ETA-6-P-CYMENE)RU(3-HYDROXY-2- PYRIDONE)CL] COMPOUND organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >4xvi_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX OF HUMAN POLYMERASE NU AND DNA WITH THE FINGER DOMAIN AJAR organism=Homo sapiens DNA sequence DC(T1):DG(P14) DC(T2):DG(P13) DT(T3):DA(P12) DA(T4):DT(P11) DG(T5):DC(P10) DC(T6):DG(P9) DG(T7):DC(P8) DT(T8):DA(P7) DC(T9):DG(P6) DA(T10):DT(P5) DG(T11):DC(P4) chainA (338) LYS540 0 0 2 4 2 0 0 0 0 0 0 (369) ARG571 8 1 0 0 0 0 0 0 0 0 0 (474) TYR686 57 0 0 0 0 0 0 0 0 0 0 (553) ASN765 5 0 0 0 0 0 0 0 0 0 0 (557) GLN769 7 1 0 0 0 0 0 0 0 0 0 (590) HIS802 0 3 0 0 0 0 0 0 0 0 0 prot.sequence kkhfcdirhlddwaksqliemlkqaaalvitvmytdgstqlgadqtpvssvrgivvlvkrqaegcgpvlegfvsddpciyiqiehsaiwdqeqeahqqfarnvlfqtmkckcpvicfnakdfvrivlqffgndgswkhvadfigldpriaawlidpsdatpsfedlvekyceksitvkvnstygnssrnivnqnvrenlktlyrltmdlcsklkdyglwqlfrtlelplipilavmeshaiqvnkeemektsallgarlkeleqeahfvagerflitsnnqlreilfgklklhllsqrnslprtglqkypstseavlnalrdlhplpkiileyrqvhKikstfvdgllacmkkgsisstwnqtgtvtgRlsakhpniqgiskhpiqittpkkiltispramfvsskghtflaadfsqielrilthlsgdpellklfqrddvfstltsqwkdvpveqvthadreqtkkvvyavvYgagkerlaaclgvpiqeaaqflesflqkykkikdfaraaiaqchqtgcvvsimgrrrplprihahdqqlraqaerqavNfvvQgsaadlcklamihvftavaashtltarlvaqiHdellfevedpqipecaalvrrtmesleqvqalelqlqvplkvslsagrswghlvplq >4xvk_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX OF HUMAN POLYMERASE NU AND DNA WITH THE FINGER DOMAIN CLOSED organism=Homo sapiens DNA sequence DT(P5):DA(T11) DG(P6):DC(T10) DA(P7):DT(T9) DC(P8):DG(T8) DG(P9):DC(T7) DC(P10):DG(T6) DT(P11):DA(T5) DA(P12):DT(T4) DC(P13):DG(T3) DG(P14):DC(T2) DG(P15):DC(T1) chainA (324) LYS540 0 0 0 0 0 4 5 1 0 0 0 (355) ARG571 0 0 0 0 0 0 0 0 1 10 0 (405) GLU628 0 0 0 0 0 0 0 0 0 0 1 (450) LYS679 0 0 0 0 0 0 0 0 0 6 12 (453) TYR682 0 0 0 0 0 0 0 0 0 0 37 (454) ALA683 0 0 0 0 0 0 0 0 0 0 4 (457) TYR686 0 0 0 0 0 0 0 0 0 0 19 (459) ALA688 0 0 0 0 0 0 0 0 0 0 2 (463) ARG692 0 0 0 0 0 0 0 0 0 0 8 (536) ASN765 0 0 0 0 0 0 0 0 0 5 1 (540) GLN769 0 0 0 0 0 0 0 0 0 7 0 (573) HIS802 0 0 0 0 0 0 0 0 1 0 0 prot.sequence kkhfcdirhlddwaksqliemlkqaaalvitvmytdgstqlgadqtpvssvrgivvlvkrqacgpvlegfvsddpciyiqiehsaiwdqeqeahqqfarnvlfqtmkckcpvicfnakdfvrivlqffgndgswkhvadfigldpriaawlidpsdatpsfedlvekyceksitvkvnstygnssrnivnqnvrenlktlyrltmdlcsklkdyglwqlfrtlelplipilavmeshaiqvnkeemektsallgarlkeleqeahfvagerflitsnnqlreilfgklklhllsypstseavlnalrdlhplpkiileyrqvhKikstfvdgllacmkkgsisstwnqtgtvtgRlsakhpniqgiskhpiqittpkkiltispramfvsskghtflaadfsqiElrilthlsgdpellklddvfstltsqwkdvpveqvthadreqtkKvvYAvvYgAgkeRlaaclgvpiqeaaqflesflqkykkikdfaraaiaqchqtgcvvsimgrrrplprihahdqqlraqaerqavNfvvQgsaadlcklamihvftavaashtltarlvaqiHdellfevedpqipecaalvrrtmesleqvqalelqlqvplkvslsagrswghlvplq >4xvl_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX OF HUMAN POLYMERASE NU AND DNA WITH THE FINGER DOMAIN OPEN organism=Homo sapiens DNA sequence DT(P5):DA(T11) DG(P6):DC(T10) DA(P7):DT(T9) DC(P8):DG(T8) DG(P9):DC(T7) DC(P10):DG(T6) DT(P11):DA(T5) DA(P12):DT(T4) DC(P13):DG(T3) DG(P14):DC(T2) chainA (277) ASN481 0 0 0 0 1 0 0 0 0 0 (324) LYS540 0 0 0 0 0 2 3 1 0 0 (355) ARG571 0 0 0 0 0 0 0 0 1 10 (459) TYR682 0 0 0 0 0 0 0 0 0 11 (463) TYR686 0 0 0 0 0 0 0 0 0 32 (465) ALA688 0 0 0 0 0 0 0 0 0 2 (469) ARG692 0 0 0 0 0 0 0 1 4 0 (542) ASN765 0 0 0 0 0 0 0 0 0 5 (546) GLN769 0 0 0 0 0 0 0 0 0 8 (579) HIS802 0 0 0 0 0 0 0 0 1 0 prot.sequence kkhfcdirhlddwaksqliemlkqaaalvitvmytdgstqlgadqtpvssvrgivvlvkrqacgpvlegfvsddpciyiqiehsaiwdqeqeahqqfarnvlfqtmkckcpvicfnakdfvrivlqffgndgswkhvadfigldpriaawlidpsdatpsfedlvekyceksitvkvnstygnssrnivnqnvrenlktlyrltmdlcsklkdyglwqlfrtlelplipilavmeshaiqvnkeemektsallgarlkeleqeahfvagerflitsNnqlreilfgklklhllsypstseavlnalrdlhplpkiileyrqvhKikstfvdgllacmkkgsisstwnqtgtvtgRlsakhpniqgiskhpiqittpkkiltispramfvsskghtflaadfsqielrilthlsgdpellklfqeserddvfstltsqwkdvpveqvthadreqtkkvvYavvYgAgkeRlaaclgvpiqeaaqflesflqkykkikdfaraaiaqchqtgcvvsimgrrrplprihahdqqlraqaerqavNfvvQgsaadlcklamihvftavaashtltarlvaqiHdellfevedpqipecaalvrrtmesleqvqalelqlqvplkvslsagrswghlvplq >4xvm_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BINARY COMPLEX OF HUMAN POLYMERASE NU AND DNA WITH THE FINGER DOMAIN CLOSED AND THUMB DOMAIN ROTATED OUT organism=Homo sapiens DNA sequence DC(T1):DG(P13) DT(T2):DA(P12) DA(T3):DT(P11) DG(T4):DC(P10) DC(T5):DG(P9) DG(T6):DC(P8) DT(T7):DA(P7) DC(T8):DG(P6) DA(T9):DT(P5) chainA (323) LYS540 0 0 0 0 0 1 3 0 0 (354) ARG571 0 7 1 0 0 0 0 0 0 (361) ASN578 0 0 0 1 1 0 0 0 0 (404) GLU628 1 0 0 0 0 0 0 0 0 (449) LYS679 10 2 1 0 0 0 0 0 0 (452) TYR682 42 0 0 0 0 0 0 0 0 (453) ALA683 7 0 0 0 0 0 0 0 0 (456) TYR686 12 0 0 0 0 0 0 0 0 (458) ALA688 2 0 0 0 0 0 0 0 0 (462) ARG692 13 4 0 0 0 0 0 0 0 (533) ASN765 0 2 0 0 0 0 0 0 0 (537) GLN769 0 2 0 0 0 0 0 0 0 (570) HIS802 0 1 0 0 0 0 0 0 0 prot.sequence kkhfcdirhlddwaksqliemlkqaaalvitvmytdgstqlgadqtpvssvrgivvlvkrqacgpvlegfvsddpciyiqiehsaiwdqeqeahqqfarnvlfqtmkckcpvicfnakdfvrivlqffgndgswkhvadfigldpriaawlidpsdatpsfedlvekyceksitvkvnstygnssrnivnqnvrenlktlyrltmdlcsklkdyglwqlfrtlelplipilavmeshaiqvnkeemektsallgarlkeleqeahfvagerflitsnnqlreilfgklklhlkypstseavlnalrdlhplpkiileyrqvhKikstfvdgllacmkkgsisstwnqtgtvtgRlsakhpNiqgiskhpiqittpkkiltispramfvsskghtflaadfsqiElrilthlsgdpellklddvfstltsqwkdvpveqvthadreqtkKvvYAvvYgAgkeRlaacvpiqeaaqflesflqkykkikdfaraaiaqchqtgcvvsimgrrrplprihahdqqlraqaerqavNfvvQgsaadlcklamihvftavaashtltarlvaqiHdellfevedpqipecaalvrrtmesleqvqalelqlqvplkvslsagrswghlvplq >4xxe_A: title=STRUCTURE OF AGRA LYTTR DOMAIN IN COMPLEX WITH PROMOTERS organism=Staphylococcus aureus (strain COL) / Staphylococcus aureus (strain COL) DNA sequence DT(B4):DA(C14) DA(B5):DT(C13) DC(B6):DG(C12) DA(B7):DT(C11) DG(B8):DC(C10) DT(B9):DA(C9) DT(B10):DA(C8) DA(B11):DT(C7) DG(B12):DC(C6) DG(B13):DC(C5) DC(B14):DG(C4) DA(B15):DT(C3) DA(B16):DT(C2) chainA ( 29) SER168 0 0 0 0 0 0 0 0 0 0 4 8 0 ( 30) HIS169 0 0 0 0 0 0 0 0 14 11 7 4 0 ( 31) ARG170 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 44) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 94) ARG233 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence vetielkrgsnsvyvqyddimffesstkSHRliahldnrqiefYgnlkelsqlddrffrchnsfvvnrhniesidskerivyfknkehcyasvRnvkki >4xyq_A: title=STRUCTURE OF AGRA LYTTR DOMAIN IN COMPLEX WITH PROMOTERS organism=Staphylococcus aureus (strain COL) / Staphylococcus aureus (strain COL) DNA sequence DT(B2):DA(C16) DT(B3):DA(C15) DA(B4):DT(C14) DA(B5):DT(C13) DC(B6):DG(C12) DA(B7):DT(C11) DG(B8):DC(C10) DT(B9):DA(C9) DT(B10):DA(C8) DA(B11):DT(C7) DA(B12):DT(C6) DG(B13):DC(C5) DT(B14):DA(C4) DA(B15):DT(C3) DT(B16):DA(C2) chainA ( 34) HIS169 0 0 0 0 0 0 0 0 0 0 15 11 6 0 0 ( 35) ARG170 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 48) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 ( 97) VAL232 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 98) ARG233 0 0 0 2 11 11 0 0 0 0 0 0 0 0 0 prot.sequence mdnsvetielkrgsnsvyvqyddimffesstksHRliahldnrqiefYgnlkelsqlddrffrchnsfvvnrhniesidskerivyfknkehcyasVRnvkki >4xzf_A: title=CRYSTAL STRUCTURE OF HIRAN DOMAIN OF HUMAN HLTF IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DA(B1) DC(B2) DC(B3) DG(B4) DC(B5) DC(B6) DG(B7) DG(B8) DG(B9) DT(B10) DG(B11) DC(B12) DC(B13) chainA ( 20) TYR72 0 0 0 0 0 0 0 0 0 0 0 20 0 ( 21) TYR73 0 0 0 0 0 0 0 0 0 0 0 14 1 ( 39) ASN91 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 41) TYR93 0 0 0 0 0 0 0 0 0 0 0 0 31 ( 58) HIS110 0 0 0 0 0 0 0 0 0 0 0 8 5 prot.sequence gplgsvlfgslrghvvglrYYtgvvnnnemvalqrdpnNpYdknaikvnnvngnqvgHlkkelagalayimdnklaqiegvvpfgannaftmplhmtfwgkeenrkavsdqlkkhgfklgp >4xzq_ABCDEFGH:Histone-fold;PH_domain-like; title=NUCLEOSOME DISASSEMBLY BY RSC AND SWI/SNF IS ENHANCED BY H3 ACETYLATION NEAR THE NUCLEOSOME DYAD AXIS organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J294) DT(I2):DA(J293) DC(I3):DG(J292) DA(I4):DT(J291) DA(I5):DT(J290) DT(I6):DA(J289) DA(I7):DT(J288) DT(I8):DA(J287) DC(I9):DG(J286) DC(I10):DG(J285) DA(I11):DT(J284) DC(I12):DG(J283) DC(I13):DG(J282) DT(I14):DA(J281) DG(I15):DC(J280) DC(I16):DG(J279) DA(I17):DT(J278) DG(I18):DC(J277) DA(I19):DT(J276) DT(I20):DA(J275) DA(I21):DT(J274) DC(I22):DG(J273) DT(I23):DA(J272) DA(I24):DT(J271) DC(I25):DG(J270) DC(I26):DG(J269) DA(I27):DT(J268) DA(I28):DT(J267) DA(I29):DT(J266) DA(I30):DT(J265) DG(I31):DC(J264) DT(I32):DA(J263) DG(I33):DC(J262) DT(I34):DA(J261) DA(I35):DT(J260) DT(I36):DA(J259) DT(I37):DA(J258) DT(I38):DA(J257) DG(I39):DC(J256) DG(I40):DC(J255) DA(I41):DT(J254) DA(I42):DT(J253) DA(I43):DT(J252) DC(I44):DG(J251) DT(I45):DA(J250) DG(I46):DC(J249) DC(I47):DG(J248) DT(I48):DA(J247) DC(I49):DG(J246) DC(I50):DG(J245) DA(I51):DT(J244) DT(I52):DA(J243) DC(I53):DG(J242) DA(I54):DT(J241) DA(I55):DT(J240) DA(I57):DT(J238) DG(I58):DC(J237) DG(I59):DC(J236) DC(I60):DG(J235) DA(I61):DT(J234) DT(I62):DA(J233) DG(I63):DC(J232) DT(I64):DA(J231) DT(I65):DA(J230) DC(I66):DG(J229) DA(I67):DT(J228) DG(I68):DC(J227) DC(I69):DG(J226) DT(I70):DA(J225) DG(I71):DC(J224) DG(I72):DC(J223) DA(I73):DT(J222) DA(I74):DT(J221) DT(I75):DA(J220) DC(I76):DG(J219) DC(I77):DG(J218) DA(I78):DT(J217) DG(I79):DC(J216) DC(I80):DG(J215) DT(I81):DA(J214) DG(I82):DC(J213) DA(I83):DT(J212) DA(I84):DT(J211) DC(I85):DG(J210) DA(I86):DT(J209) DT(I87):DA(J208) DG(I88):DC(J207) DC(I89):DG(J206) DC(I90):DG(J205) DT(I91):DA(J204) DT(I92):DA(J203) DT(I93):DA(J202) DT(I94):DA(J201) DG(I95):DC(J200) DA(I96):DT(J199) DT(I97):DA(J198) DG(I98):DC(J197) DG(I99):DC(J196) DA(I100):DT(J195) DG(I101):DC(J194) DC(I102):DG(J193) DA(I103):DT(J192) DG(I104):DC(J191) DT(I105):DA(J190) DT(I106):DA(J189) DT(I107):DA(J188) DC(I108):DG(J187) DC(I109):DG(J186) DA(I110):DT(J185) DA(I111):DT(J184) DA(I112):DT(J183) DT(I113):DA(J182) DA(I114):DT(J181) DC(I115):DG(J180) DA(I116):DT(J179) DC(I117):DG(J178) DT(I118):DA(J177) DT(I119):DA(J176) DT(I120):DA(J175) DT(I121):DA(J174) DG(I122):DC(J173) DG(I123):DC(J172) DT(I124):DA(J171) DA(I125):DT(J170) DG(I126):DC(J169) DT(I127):DA(J168) DA(I128):DT(J167) DT(I129):DA(J166) DC(I130):DG(J165) DT(I131):DA(J164) DG(I132):DC(J163) DC(I133):DG(J162) DA(I134):DT(J161) DG(I135):DC(J160) DG(I136):DC(J159) DT(I137):DA(J158) DG(I138):DC(J157) DG(I139):DC(J156) DA(I140):DT(J155) DT(I141):DA(J154) DA(I142):DT(J153) DT(I143):DA(J152) DT(I144):DA(J151) DG(I145):DC(J150) DA(I146):DT(J149) DT(I147):DA(J148) chainA ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 9) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 1) ARG1230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS639 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR641 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 22) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 1) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaiharvtimpkdiqlarrirgera/dniqgitkPairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraGlqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaiharvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllRkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4xzq_E:Histone-fold; title=NUCLEOSOME DISASSEMBLY BY RSC AND SWI/SNF IS ENHANCED BY H3 ACETYLATION NEAR THE NUCLEOSOME DYAD AXIS organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J294) DT(I2):DA(J293) DC(I3):DG(J292) DA(I4):DT(J291) DA(I5):DT(J290) DT(I6):DA(J289) DA(I7):DT(J288) DT(I8):DA(J287) DC(I9):DG(J286) DC(I10):DG(J285) DA(I11):DT(J284) DC(I12):DG(J283) DC(I13):DG(J282) DT(I14):DA(J281) DG(I15):DC(J280) DC(I16):DG(J279) DA(I17):DT(J278) DG(I18):DC(J277) DA(I19):DT(J276) DT(I20):DA(J275) DA(I21):DT(J274) DC(I22):DG(J273) DT(I23):DA(J272) DA(I24):DT(J271) DC(I25):DG(J270) DC(I26):DG(J269) DA(I27):DT(J268) DA(I28):DT(J267) DA(I29):DT(J266) DA(I30):DT(J265) DG(I31):DC(J264) DT(I32):DA(J263) DG(I33):DC(J262) DT(I34):DA(J261) DA(I35):DT(J260) DT(I36):DA(J259) DT(I37):DA(J258) DT(I38):DA(J257) DG(I39):DC(J256) DG(I40):DC(J255) DA(I41):DT(J254) DA(I42):DT(J253) DA(I43):DT(J252) DC(I44):DG(J251) DT(I45):DA(J250) DG(I46):DC(J249) DC(I47):DG(J248) DT(I48):DA(J247) DC(I49):DG(J246) DC(I50):DG(J245) DA(I51):DT(J244) DT(I52):DA(J243) DC(I53):DG(J242) DA(I54):DT(J241) DA(I55):DT(J240) DA(I57):DT(J238) DG(I58):DC(J237) DG(I59):DC(J236) DC(I60):DG(J235) DA(I61):DT(J234) DT(I62):DA(J233) DG(I63):DC(J232) DT(I64):DA(J231) DT(I65):DA(J230) DC(I66):DG(J229) DA(I67):DT(J228) DG(I68):DC(J227) DC(I69):DG(J226) DT(I70):DA(J225) DG(I71):DC(J224) DG(I72):DC(J223) DA(I73):DT(J222) DA(I74):DT(J221) DT(I75):DA(J220) DC(I76):DG(J219) DC(I77):DG(J218) DA(I78):DT(J217) DG(I79):DC(J216) DC(I80):DG(J215) DT(I81):DA(J214) DG(I82):DC(J213) DA(I83):DT(J212) DA(I84):DT(J211) DC(I85):DG(J210) DA(I86):DT(J209) DT(I87):DA(J208) DG(I88):DC(J207) DC(I89):DG(J206) DC(I90):DG(J205) DT(I91):DA(J204) DT(I92):DA(J203) DT(I93):DA(J202) DT(I94):DA(J201) DG(I95):DC(J200) DA(I96):DT(J199) DT(I97):DA(J198) DG(I98):DC(J197) DG(I99):DC(J196) DA(I100):DT(J195) DG(I101):DC(J194) DC(I102):DG(J193) DA(I103):DT(J192) DG(I104):DC(J191) DT(I105):DA(J190) DT(I106):DA(J189) DT(I107):DA(J188) DC(I108):DG(J187) DC(I109):DG(J186) DA(I110):DT(J185) DA(I111):DT(J184) DA(I112):DT(J183) DT(I113):DA(J182) DA(I114):DT(J181) DC(I115):DG(J180) DA(I116):DT(J179) DC(I117):DG(J178) DT(I118):DA(J177) DT(I119):DA(J176) DT(I120):DA(J175) DT(I121):DA(J174) DG(I122):DC(J173) DG(I123):DC(J172) DT(I124):DA(J171) DA(I125):DT(J170) DG(I126):DC(J169) DT(I127):DA(J168) DA(I128):DT(J167) DT(I129):DA(J166) DC(I130):DG(J165) DT(I131):DA(J164) DG(I132):DC(J163) DC(I133):DG(J162) DA(I134):DT(J161) DG(I135):DC(J160) DG(I136):DC(J159) DT(I137):DA(J158) DG(I138):DC(J157) DG(I139):DC(J156) DA(I140):DT(J155) DT(I141):DA(J154) DA(I142):DT(J153) DT(I143):DA(J152) DT(I144):DA(J151) DG(I145):DC(J150) DA(I146):DT(J149) DT(I147):DA(J148) chainE ( 2) HIS639 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR641 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaiharvtimpkdiqlarrirgera >4y0f_A:RNA-binding_domain,_RBD; title=CRYSTAL STRUCTURE OF HUMAN TDP-43 RRM1 DOMAIN IN COMPLEX WITH AN UNMODIFIED SINGLE-STRANDED DNA organism=Homo sapiens DNA sequence DG(C1) DT(C2) DT(C3) DG(C4) DA(C5) DG(C6) DC(C7) DG(C8) DT(C9) DT(C10) chainA ( 3) ASP105 0 0 0 0 0 0 0 6 0 0 ( 5) ILE107 0 0 0 0 0 0 10 0 0 0 ( 7) LEU109 0 0 0 0 0 7 0 0 0 0 ( 11) TRP113 0 0 48 46 2 0 0 0 0 0 ( 32) GLN134 0 0 0 0 0 0 0 2 0 1 ( 34) LYS136 0 0 0 0 0 0 0 2 0 2 ( 37) LEU139 0 0 0 0 0 0 0 0 14 0 ( 43) LYS145 0 0 0 0 0 1 0 0 0 0 ( 45) PHE147 0 0 0 0 0 12 0 0 0 0 ( 47) PHE149 0 0 0 0 0 0 0 41 0 0 ( 69) ARG171 0 0 0 32 0 0 0 0 0 0 ( 76) PRO178 0 0 0 0 0 0 3 8 0 0 ( 77) ASN179 0 0 0 0 0 0 18 0 0 0 ( 78) SER180 0 0 0 0 0 0 0 2 0 0 prot.sequence tsDlIvLglpWktteqdlkeyfstfgevlmvQvKkdLktghsKgFgFvrfteyetqvkvmsqrhmidgRwcdcklPNS >4y5w_AC:p53-like_transcription_factors;SH2_domain;STAT; title=TRANSCRIPTION FACTOR-DNA COMPLEX organism=Homo sapiens DNA sequence DT(N1):DA(M22) DC(N2):DG(M21) DT(N3):DA(M20) DG(N4):DC(M19) DT(N5):DA(M18) DC(N6):DG(M17) DT(N7):DA(M16) DT(N8):DA(M15) DC(N9):DG(M14) DC(N10):DG(M13) DT(N11):DA(M12) DA(N12):DT(M11) DG(N13):DC(M10) DG(N14):DC(M9) DA(N15):DT(M8) DA(N16):DT(M7) DA(N17):DT(M6) DT(N18):DA(M5) DC(N19):DG(M4) DC(N20):DG(M3) DA(N21):DT(M2) DT(N22):DA(M1) chainA (203) ARG373 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) VAL414 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) HIS415 0 0 0 0 0 0 1 10 9 10 0 0 0 0 0 0 0 0 0 0 0 0 (244) ASN417 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) GLN418 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (127) LYS284 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (234) VAL414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (235) HIS415 0 0 0 0 0 0 0 0 0 0 0 0 7 9 3 0 0 0 0 0 0 0 prot.sequence kfktglrrlqhrvgeihllrealqkalamllqettgeleaakalvlkriqiwkrqqqlagngapfeeslaplqerceslvdiysqlqqevgaaggetrasltgrldevlrtlvtscflvekqppqvlktqtkfqagvrfllglrflgpakpplvradmvtekqaretgeiinntvplensipgnccsalfknlllkkikrceRkgtesvteekcavlfsasftlglpiqlqalslplvviVHgNQdnnakatilwdnafsemdrvpfvvaervpwekmcetlnlkfmaevgtnrgllpehflflaqkifndnslsmeafqhrsvswsqfnkeillgrgftfwqwfdgvldltkrclrsywsdrliigfiskqyvtslllnepdgtfllrfsdseiggitiahvirgqdgspqieniqpfsakdlsirslgdrirdlaqlknlypkkpkdeafrshykpeqmgkdgrgvpatikmtve/kfktglrrlqhrvgeihllrealqkealamllqettgeleaakalvlkriqiwkrqqqlagngapfeeslaplqerceslvdiysqlqqevgaagtrasltgrldevlrtlvtscflvekqppqvlKtqtkfqagvrfllglrflgapakpplvradmvtekqaretgeiinntvplensipgnccsalfknlllkkikrcsvteekcavlfsasftlgpiqlqalslplvviVHgnqdnnakatilwdnafsemdrvpfvvaervpwekmcetlnlkfmaevgtnrgllpehflflaqkifndnslsmeafqhrsvswsqfnkeillgrgftfwqwfdgvldltkrclrsywsdrliigfiskqyvtslllnepdgtfllrfsdseiggitiahvigspqieniqpfsakdlsirslgdrirdlaqlknlypkkpkdeafrshykpeqmggrgvpatikmtve >4y5w_B:p53-like_transcription_factors;SH2_domain;STAT; title=TRANSCRIPTION FACTOR-DNA COMPLEX organism=Homo sapiens DNA sequence DA(E1):DT(F22) DT(E2):DA(F21) DG(E3):DC(F20) DG(E4):DC(F19) DA(E5):DT(F18) DT(E6):DA(F17) DT(E7):DA(F16) DT(E8):DA(F15) DC(E9):DG(F14) DC(E10):DG(F13) DT(E11):DA(F12) DA(E12):DT(F11) DG(E13):DC(F10) DG(E14):DC(F9) DA(E15):DT(F8) DA(E16):DT(F7) DG(E17):DC(F6) DA(E18):DT(F5) DC(E19):DG(F4) DA(E20):DT(F3) DG(E21):DC(F2) DA(E22):DT(F1) chainB (203) LYS374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (240) VAL414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (241) HIS415 0 0 0 0 0 0 0 0 0 0 0 0 11 9 11 1 0 0 0 0 0 0 (243) ASN417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (244) GLN418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence kfktglrrlqhrvgeihllrealqkalamllqettgeleaakalvlkriqiwkrqqqlagngapfeeslaplqerceslvdiysqlqqevgaagtrasltgrldevlrtlvtscflvekqppqvlktqtkfqagvrfllglrflgapakpplvradmvtekqaretgeiinntvplensipgnccsalfknlllkkikrcerKgtesvteekcavlfsasftlgppiqlqalslplvviVHgNQdnnakatilwdnafsemdrvpfvvaervpwekmcetlnlkfmaevgtnrgllpehflflaqkifndnslsmeafqhrsvswsqfnkeillgrgftfwqwfdgvldltkrclrsywsdrliigfiskqyvtslllnepdgtfllrfsdseiggitiahvirgqdgspqieniqpfsakdlsirslgdrirdlaqlknlypkkpkdeafrshykpeqmgkdgrgvpatikmtve >4y5w_BD:p53-like_transcription_factors;SH2_domain;STAT; title=TRANSCRIPTION FACTOR-DNA COMPLEX organism=Homo sapiens DNA sequence DC(F2):DG(E21) DT(F3):DA(E20) DG(F4):DC(E19) DT(F5):DA(E18) DC(F6):DG(E17) DT(E7):DA(E15) DT(F8):DG(E14) DC(F9):DG(E13) DC(F10):DA(E12) DT(F11):DC(E10) DG(F13):DC(E9) DG(F14):DA(E16) DT(F18):DA(E5) DC(F19):DG(E4) DC(F20):DG(E3) DA(F21):DT(E2) chainB (240) VAL414 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 (241) HIS415 0 0 0 0 0 4 15 13 0 0 0 0 0 0 0 0 (243) ASN417 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (244) GLN418 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainD (241) VAL414 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (242) HIS415 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 prot.sequence kfktglrrlqhrvgeihllrealqkalamllqettgeleaakalvlkriqiwkrqqqlagngapfeeslaplqerceslvdiysqlqqevgaagtrasltgrldevlrtlvtscflvekqppqvlktqtkfqagvrfllglrflgapakpplvradmvtekqaretgeiinntvplensipgnccsalfknlllkkikrcerkgtesvteekcavlfsasftlgppiqlqalslplvviVHgNQdnnakatilwdnafsemdrvpfvvaervpwekmcetlnlkfmaevgtnrgllpehflflaqkifndnslsmeafqhrsvswsqfnkeillgrgftfwqwfdgvldltkrclrsywsdrliigfiskqyvtslllnepdgtfllrfsdseiggitiahvirgqdgspqieniqpfsakdlsirslgdrirdlaqlknlypkkpkdeafrshykpeqmgkdgrgvpatikmtve/kfktglrrlqhrvgeihllrealqkealamllqettgeleaakalvlkriqiwkrqqqlagngapfeeslaplqerceslvdiysqlqqevgaaggeltrasltgrldevlrtlvtscflvekqppqvlktqtkfqagvrfllglrflgapakpplvradmvtekqaretgeiinntvplensipgnccsalfknlllkkikrcegtesvteekcavlfsasftlgpiqlqalslplvviVHgnqdnnakatilwdnafsemdrvpfvvaervpwekmcetlnlkfmaevgtnrgllpehflflaqkifndnslsmeafqhrsvswsqfnkeillgrgftfwqwfdgvldltkrclrsywsdrliigfiskqyvtslllnepdgtfllrfsdseiggitiahvigspqieniqpfsakdlsirslgdrirdlaqlknlypkkpkdeafrshykpeqmggrgvpatikmtve >4y60_C:HMG-box; title=STRUCTURE OF SOX18-HMG/PROX1-DNA organism=Mus musculus DNA sequence DC(A2):DG(B15) DT(A3):DA(B14) DA(A4):DT(B13) DG(A5):DC(B12) DC(A6):DG(B11) DA(A7):DT(B10) DT(A8):DA(B9) DT(A9):DA(B8) DG(A10):DC(B7) DT(A11):DA(B6) DC(A12):DG(B5) DT(A13):DA(B4) DG(A14):DC(B3) DG(A15):DC(B2) DG(A16):DC(B1) chainC ( 6) ARG5 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 ( 9) ASN8 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 ( 11) PHE10 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 12) MET11 0 0 0 0 0 0 5 17 0 0 0 0 0 0 0 ( 19) ARG18 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 ( 31) ASN30 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 ( 35) SER34 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 ( 73) TYR72 0 0 0 0 0 0 0 0 1 8 2 0 0 0 0 prot.sequence glrirRpmNaFMvwakdeRkrlaqqnpdlhNavlSkmlgkawkelntaekrpfveeaerlrvqhlrdhpnykYrpr >4y7n_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THE STRUCTURE INSIGHT INTO 5-CARBOXYCYTOSINE RECOGNITION BY RNA POLYMERASE II DURING TRANSCRIPTION ELONGATION. organism=? DNA sequence DC(N1):DG(T14) DT(N2):DA(T13) DG(N3):DC(T12) DC(N4):DG(T11) DT(N5):DA(T10) DT(N6):DA(T9) DA(N7):DT(T8) DT(N8):DA(T7) DC(N9):DG(T6) DG(N10):DC(T5) DG(N11):DC(T4) DT(N12):DA(T3) DA(N13):DT(T2) DG(N14):DC(T1) chainA (141) LYS143 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi >4y7n_ABE: title=THE STRUCTURE INSIGHT INTO 5-CARBOXYCYTOSINE RECOGNITION BY RNA POLYMERASE II DURING TRANSCRIPTION ELONGATION. organism=? DNA sequence DC(N1):DG(T14) DT(N2):DA(T13) DG(N3):DC(T12) DC(N4):DG(T11) DT(N5):DA(T10) DT(N6):DA(T9) DA(N7):DT(T8) DT(N8):DA(T7) DC(N9):DG(T6) DG(N10):DC(T5) DG(N11):DC(T4) DT(N12):DA(T3) DA(N13):DT(T2) DG(N14):DC(T1) chainA (141) LYS143 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingSekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrs/dqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvVnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >4yfu_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF OPEN BACILLUS FRAGMENT DNA POLYMERASE BOUND TO DNA AND DTTP organism=Geobacillus stearothermophilus DNA sequence DA(F6):2DT(E101) DG(F7):DC(E28) DC(F8):DG(E27) DA(F9):DT(E26) DT(F10):DA(E25) DC(F11):DG(E24) DA(F12):DT(E23) DT(F13):DA(E22) DG(F14):DC(E21) chainD (285) LYS582 0 0 0 6 3 0 0 0 0 (290) TYR587 0 0 1 0 0 0 0 0 0 (318) ARG615 6 4 0 0 0 0 0 0 0 (325) ASN622 0 0 1 0 0 0 0 0 0 (328) ASN625 0 1 11 2 0 0 0 0 0 (332) ARG629 3 3 0 0 0 0 0 0 0 (417) TYR714 53 0 0 0 0 0 0 0 0 (500) GLN797 2 1 0 0 0 0 0 0 0 (532) HIS829 0 2 0 0 0 0 0 0 0 prot.sequence kkmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >4yg1_ABCD:lambda_repressor-like_DNA-binding_domains; title=HIPB-O1-O2 COMPLEX/P21212 CRYSTAL FORM organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DT(F699):DA(T747) DT(F700):DA(T746) DA(F701):DT(T745) DT(F702):DA(T744) DC(F703):DG(T743) DC(F704):DG(T742) DG(F705):DC(T741) DC(F706):DG(T740) DT(F707):DA(T739) DA(F709):DT(T737) DA(F710):DT(T736) DG(F711):DC(T735) DG(F712):DC(T734) DG(F713):DC(T733) DG(F714):DC(T732) DA(F715):DT(T731) DT(F716):DA(T730) DA(F717):DT(T729) DT(F718):DA(T728) DT(F719):DA(T727) DA(F720):DT(T726) DT(F721):DA(T725) DA(F722):DT(T724) DA(F723):DT(T723) DG(F724):DC(T722) DT(F725):DA(T721) DT(F726):DA(T720) DT(F727):DA(T719) DT(F728):DA(T718) DA(F729):DT(T717) DT(F730):DA(T716) DC(F731):DG(T715) DC(F732):DG(T714) DT(F733):DA(T713) DT(F734):DA(T712) DT(F735):DA(T711) DA(F736):DT(T710) DG(F737):DC(T709) DG(F739):DC(T707) DA(F740):DT(T706) DG(F741):DC(T705) DG(F742):DC(T704) DA(F743):DT(T703) DT(F744):DA(T702) DA(F745):DT(T701) DA(F746):DT(T700) chainA ( 29) SER29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) SER29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 7 2 0 0 0 ( 36) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 10 0 ( 37) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 41) ASN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainC ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 2 7 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 28) SER29 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS38 0 0 0 2 4 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN39 0 10 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ALA40 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER43 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mmsfqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcd/fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSNfennpdnttlttffkilqslelsmtlcd/fqkiysptqlanamklvrqqngwtqselakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcd/msfqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcd >4yg1_C:lambda_repressor-like_DNA-binding_domains; title=HIPB-O1-O2 COMPLEX/P21212 CRYSTAL FORM organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DT(F699):DA(T747) DT(F700):DA(T746) DA(F701):DT(T745) DT(F702):DA(T744) DC(F703):DG(T743) DC(F704):DG(T742) DG(F705):DC(T741) DC(F706):DG(T740) DT(F707):DA(T739) DA(F709):DT(T737) DA(F710):DT(T736) DG(F711):DC(T735) DG(F712):DC(T734) DG(F713):DC(T733) DG(F714):DC(T732) DA(F715):DT(T731) DT(F716):DA(T730) DA(F717):DT(T729) DT(F718):DA(T728) DT(F719):DA(T727) DA(F720):DT(T726) DT(F721):DA(T725) DA(F722):DT(T724) DA(F723):DT(T723) DG(F724):DC(T722) DT(F725):DA(T721) DT(F726):DA(T720) DT(F727):DA(T719) DT(F728):DA(T718) DA(F729):DT(T717) DT(F730):DA(T716) DC(F731):DG(T715) DC(F732):DG(T714) DT(F733):DA(T713) DT(F734):DA(T712) DT(F735):DA(T711) DA(F736):DT(T710) DG(F737):DC(T709) DG(F739):DC(T707) DA(F740):DT(T706) DG(F741):DC(T705) DG(F742):DC(T704) DA(F743):DT(T703) DT(F744):DA(T702) DA(F745):DT(T701) DA(F746):DT(T700) chainC ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 2 7 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fqkiysptqlanamklvrqqngwtqselakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcd >4yg4_ABCD:lambda_repressor-like_DNA-binding_domains; title=HIPB-O1-O1* COMPLEX organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DT(T700):DA(F747) DA(T702):DT(F745) DT(T703):DA(F744) DC(T704):DG(F743) DC(T705):DG(F742) DC(T706):DG(F741) DC(T707):DG(F740) DT(T708):DA(F739) DT(T709):DA(F738) DA(T710):DT(F737) DA(T711):DT(F736) DG(T712):DC(F735) DG(T713):DC(F734) DG(T714):DC(F733) DG(T715):DC(F732) DA(T716):DT(F731) DT(T717):DA(F730) DA(T718):DT(F729) DT(T719):DA(F728) chainA ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 2 5 5 0 0 0 0 ( 36) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 ( 37) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 chainB ( 35) LYS38 0 0 0 8 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD prot.sequence fqkiysptqlanamklvrqqngwtqselakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcd/fqkiysptqlanamklvrqqngwtqselakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak/fqkiysptqlanamklvrqqngwtqselakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcd/fqkiysptqlanamklvrqqngwtqselakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcd >4yg7_B:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF FL AUTOREPRESSION PROMOTER COMPLEX organism=? DNA sequence DT(T672):DA(R747) DT(T673):DA(R746) DA(T674):DT(R745) DT(T675):DA(R744) DC(T677):DG(R743) DC(T678):DG(R741) DC(T679):DG(R740) DT(T680):DA(R739) DT(T681):DA(R738) DA(T683):DT(R736) DG(T684):DC(R735) DG(T685):DC(R734) DG(T687):DC(R733) DA(T688):DT(R731) DT(T689):DA(R730) DA(T690):DT(R729) DT(R727):DA(R728) DT(T691):DA(T692) DT(T693):DA(R726) DA(T694):DT(R725) DT(T695):DA(R724) DA(T696):DT(R723) DT(T697):DA(R722) DA(T698):DT(R721) DT(T699):DA(R720) DA(T700):DT(R719) DT(T701):DA(R718) DA(T702):DT(R717) DT(T703):DA(R716) DC(T704):DG(R715) DC(T706):DG(R714) DC(T707):DG(R712) DT(T708):DA(R711) DT(T709):DA(R710) DA(T710):DT(R709) DA(T711):DT(R708) DG(T712):DC(R707) DG(T713):DC(R706) DG(T714):DC(R705) DG(T715):DC(R704) DA(T716):DT(R703) DT(T717):DA(R702) DA(T718):DT(R700) chainB ( 26) SER29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 8 0 0 0 ( 36) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 ( 37) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 prot.sequence fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcd >4yg7_BCDEGK:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF FL AUTOREPRESSION PROMOTER COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(R700):DA(T718) DA(R702):DT(T717) DT(R703):DA(T716) DC(R704):DG(T715) DC(R705):DG(T714) DC(R706):DG(T713) DC(R707):DG(T712) DT(R708):DA(T711) DT(R709):DA(T710) DA(R710):DT(T709) DA(R711):DT(T708) DG(R712):DC(T707) DG(R714):DC(T706) DG(R715):DC(T704) DA(R716):DT(T703) DT(R717):DA(T702) DA(R718):DT(T701) DT(R719):DA(T700) DA(R720):DT(T699) DT(R721):DA(T698) DA(R722):DT(T697) DT(R723):DA(T696) DA(R724):DT(T695) DT(R725):DA(T694) DA(R726):DT(T693) DA(T692):DT(T691) DA(R728):DT(R727) DT(R729):DA(T690) DA(R730):DT(T689) DT(R731):DA(T688) DC(R733):DG(T687) DC(R734):DG(T685) DC(R735):DG(T684) DT(R736):DA(T683) DA(R738):DT(T681) DA(R739):DT(T680) DG(R740):DC(T679) DG(R741):DC(T678) DG(R743):DC(T677) DA(R744):DT(T675) DT(R745):DA(T674) DA(R746):DT(T673) DA(R747):DT(T672) chainB ( 26) SER29 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 8 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 26) SER29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 25) GLN28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 26) SER29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 ( 36) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 0 ( 37) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 chainK prot.sequence fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcd/fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak/pklvtwmnnqrvgeltklangahtfKyapewlasRYArpLslslplqrgnitsdavfnffdnllpdspivrdrivkryhaksrqpfdllseigrdsvgavtlipedetvthpimawekltearleevltaykadfrisvagaqektallrigndwcipkgitptthiiklpilsqsvdneyyclllakelglnvpdaeiikagnvralaverfdrrwnaertvllrlpqedmcqtfglpssvkyesdggpgiarimaflmgssealkdrydfmkfqvfqwligatqghaknfsvfiqaggsyrltpfydiisafpvlggtgihisdlklamglnaskgkktaidkiyprhflatakvlrfpevqmheilsdfarmipaaldnvktslptdfpenvvtavesnvlrlhgrlsrey/fqkiysptqlanamklvrqqngwtqselakkigiKQatiSnfennpdnttlttffkilqslelsmtlcd/fqkiysptqlanamklvrqqngwtQSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak/pklvtwmnnqrvgeltklangahtFKyapewlasRYArpLslslplqrgnitsdavfnffdnllpdspivrdrivkryhaksrqpfdllseigrdsvgavtlipedetvthpimawekltearleevltaykarisvagaqektallrigndwcipkgitptthiiklpilsqsvdneyyclllakelglnvpdaeiikagnvralaverfdrrwnaertvllrlpqedmcqtfglpssvkyesdggpgiarimaflmgssealkdrydfmkfqvfqwligatqghaknfsvfiqaggsyrltpfydiisafpvlggtgihisdlklamglnaskgkktaidkiyprhflatakvlrfpevqmheilsdfarmipaaldnvktslptdfpenvvtavesnvlrlhgrlsrey >4yhx_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF LAGLIDADG MEGANUCLEASE I-GPEMI BOUND TO UNCLEAVED DNA organism=Grosmannia penicillata DNA sequence DG(C1):DC(B26) DG(C2):DC(B25) DT(C3):DA(B24) DA(C4):DT(B23) DA(C5):DT(B22) DA(C6):DT(B21) DG(C7):DC(B20) DG(C8):DC(B19) DG(C9):DC(B18) DT(C10):DA(B17) DT(C11):DA(B16) DG(C12):DC(B15) DA(C13):DT(B14) DA(C14):DT(B13) DT(C15):DA(B12) DA(C16):DT(B11) DA(C17):DT(B10) DG(C18):DC(B9) DC(C19):DG(B8) DG(C20):DC(B7) DG(C21):DC(B6) DA(C22):DT(B5) DA(C23):DT(B4) DA(C24):DT(B3) DG(C25):DC(B2) chainA ( 18) SER21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 22) ARG25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 10 0 0 0 0 0 ( 24) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 12 2 0 0 0 ( 26) ASN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 28) LYS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 ( 29) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 34) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 36) GLU39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 ( 40) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 ( 42) THR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 ( 66) SER69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 ( 70) ALA73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 74) LYS77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 (172) CYS185 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) PHE187 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) SER189 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ILE191 0 0 0 0 1 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) SER193 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) SER195 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) GLN200 0 0 0 14 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) GLN202 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR208 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) TYR228 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) LYS230 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) LYS232 0 0 0 0 0 0 0 2 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) LYS234 0 0 0 0 0 0 0 0 0 0 4 6 5 0 0 0 0 0 0 0 0 0 0 0 0 (224) PHE237 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (226) TRP239 0 0 0 0 0 0 0 0 0 1 5 17 2 0 0 0 0 0 0 0 0 0 0 0 0 (228) GLU241 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) THR245 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nesinpwvltgfadaegSfilRiRnNnKSsagyStElgfQiTlhkkdksileniqstwkvgvianSgdnAvSlKvtrfedlrvvlnhfekyplitqklgdyllfkqafsvmenkehlkiegikrlvgikanlnwgltdelkeafvasggenifnknipnsgwlagftsgegCfFvSlIkSkSklgvQvQlvfsiTqhardrelmdnlvtylgcgYiKeKkKseFsWlEfvvTkfsdikdkiipvfqenniigvkledfedwckvaklieekkhltesgleeirniklnmnkgrv >4yig_E:Uracil-DNA_glycosylase-like; title=VACCINIA VIRUS D4/A20(1-50) IN COMPLEX WITH DSDNA CONTAINING AN ABASIC SITE AND FREE URACYL organism=VACCINIA VIRUS (STRAIN COPENHAGEN) / VACCINIA VIRUS (STRAIN COPENHAGEN) DNA sequence DA(H22):DT(G10) DA(H23):DT(G9) DG(H24):DC(G8) DA(H25):DT(G7) DT(H26):DA(G6) DA(H28):DT(G4) DC(H29):DG(G3) DA(H30):DT(G2) DG(H31):DC(G1) chainE ( 89) LYS87 0 0 0 0 0 6 0 0 0 (163) THR161 0 0 0 6 0 0 0 0 0 (187) ARG185 0 0 0 0 33 47 0 0 0 prot.sequence dpmnsvtvshapytityhddwepvmsqlvefynevaswllrdetspipdkffiqlkqplrnkrvcvcgidpypkdgtgvpfespnftkKsikeiassisrltgvidykgynlniidgvipwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgkTdfsniraklespvttivgyhpaaRdrqfekdrsfeiinvlleldnkvpinwaqgfiy >4yir_A:Cysteine_proteinases; title=CRYSTAL STRUCTURE OF RAD4-RAD23 CROSSLINKED TO AN UNDAMAGED DNA organism=? DNA sequence DT(W2):DA(Y24) DG(W3):DC(Y23) DA(W4):DT(Y22) DC(W5):DG(Y21) DT(W6):DA(Y20) DC(W7):DG(Y19) DA(W9):DC(Y18) DC(W10):DT(Y17) DA(W11):DG(Y16) DT(W12):DT(Y15) DC(W13):DA(Y14) DC(W14):DG(Y13) DC(W15):DG(Y12) DC(W16):DG(Y11) DC(W17):DG(Y9) DG(W18):DC(Y8) DC(W19):DG(Y7) DT(W20):DA(Y6) DA(W21):DT(Y5) DC(W22):DG(Y4) DA(W23):DT(Y3) DA(W24):DT(Y2) chainA ( 4) ARG129 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ARG137 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG494 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (373) MET498 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 (421) ASN554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (423) PHE556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 (425) ASN558 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (427) GLU560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (461) VAL594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (464) PHE597 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 (466) PHE599 0 0 0 0 0 0 0 0 0 0 0 0 33 24 0 0 0 0 0 0 0 0 (467) GLU600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (471) THR604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 (473) LYS606 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (474) PRO607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 prot.sequence rtsRncssneeRkrrkyfhmlylvclmvhgfirnewinskrlsrklsnlvpekvfellhpqkdeelplrstrklldglkkcmelwqkhwkitkkydneglymrtwkeiemsannkrkfktlkrsdflravskghgdpdisvqgfvamlracnvnarlimscqppdftnmkidtslngnnaykdmvkypifwcevwdkfskkwitvdpvnlktieqvrlhsklapkgvaccernmlryviaydrkygcrdvtrryaqwmnskvrkrritkddfgekwfrkvitalhhrkrtkiddyedqyffrrdesegipdsvqdlknhpyyvleqdikqtqivkpgckecgylkvhgkvgkvlkvyakrdiadlksaRqwyMngrilktgsrckkvikrteeederlysfedtelyipplasasgeitkNtFgNiEvfaptmipgncclvenpvaikaarflgvefapaVtsFkFErgsTvKPvlsgivvakwlreaietaidgiefi >4yis_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF LAGLIDADG MEGANUCLEASE I-CPAMI BOUND TO UNCLEAVED DNA organism=Cryphonectria parasitica DNA sequence DC(E1):DG(F27) DC(E2):DG(F26) DT(E3):DA(F25) DA(E4):DT(F24) DG(E5):DC(F23) DC(E6):DG(F22) DC(E7):DG(F21) DC(E8):DG(F20) DA(E9):DT(F19) DC(E10):DG(F18) DA(E11):DT(F17) DA(E12):DT(F16) DT(E13):DA(F15) DA(E14):DT(F14) DT(E15):DA(F13) DT(E16):DA(F12) DA(E17):DT(F11) DA(E18):DT(F10) DG(E19):DC(F9) DG(E20):DC(F8) DC(E21):DG(F7) DC(E22):DG(F6) DA(E23):DT(F5) DT(E24):DA(F4) DC(E25):DG(F3) DC(E26):DG(F2) DC(E27):DG(F1) chainA ( 16) SER20 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LEU24 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLN26 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS30 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) TYR31 0 0 16 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG36 0 0 0 14 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) LYS38 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) VAL40 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) HIS66 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) HIS68 0 0 0 0 0 0 0 0 4 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) GLN74 0 0 0 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG76 0 0 0 0 0 0 5 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP78 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) SER179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (177) ASN181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 (179) LYS183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 5 0 0 0 0 0 0 (181) SER185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 (183) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (185) THR189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 (186) SER190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 (191) ARG195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 28 0 0 0 0 (193) GLN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 (195) ARG199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 8 0 0 0 0 0 0 0 0 (225) TYR229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (232) ARG236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 6 0 0 0 0 0 0 0 0 0 (234) GLU238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 (236) VAL240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence sfnpwfltgfsdaecSfSiLiQansKYstgwRiKpVfaiglhkkdnellkriqsylgvgkiHiHgkdsiQfRiDspkeleviinhfenyplvtakqadytlfkkaldviknkehlsqkgllklvgikaslnlglngslkeafpnweelqidrpsyvnkgipdpnwisgfasgdsSfNvKiSnSpTSllnkRvQlRfgiglnirekaliqylvayfdlsdnlkniYfdlnsaRfEvVkfsditdkiipffdkysiqgkksqdyqnfkevadiiksknhltsegfqeildikasmnk >4yit_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF LAGLIDADG MEGANUCLEASE I-AABMI BOUND TO UNCLEAVED DNA organism=Gremmeniella abietina DNA sequence DA(B2):DT(C24) DG(B3):DC(C23) DG(B4):DC(C22) DT(B5):DA(C21) DA(B6):DT(C20) DC(B7):DG(C19) DC(B8):DG(C18) DC(B9):DG(C17) DT(B10):DA(C16) DT(B11):DA(C15) DT(B12):DA(C14) DA(B13):DT(C13) DA(B14):DT(C12) DA(B15):DT(C11) DC(B16):DG(C10) DC(B17):DG(C9) DT(B18):DA(C8) DA(B19):DT(C7) DC(B20):DG(C6) DT(B21):DA(C5) DA(B22):DT(C4) DA(B23):DT(C3) DC(B24):DG(C2) DC(B25):DG(C1) chainA ( 15) CYS15 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG17 0 0 0 0 0 6 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) SER19 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) THR21 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS22 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG30 0 16 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) GLN32 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) PHE34 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) GLN36 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN38 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) HIS60 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER62 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU66 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN68 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG70 0 0 0 0 5 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) GLN72 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) CYS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (160) MET173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 (164) ALA177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (166) SER179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (168) ALA181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (174) GLN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 0 0 0 (176) TYR189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 (180) ILE193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (182) THR195 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 (202) ARG215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 (206) LYS219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 (207) ARG220 0 0 0 0 0 0 0 0 0 0 0 0 6 24 9 0 0 0 0 0 0 0 0 0 (209) VAL222 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (211) GLU224 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 (213) GLN226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence inpwfltgfidgegCfRiSvTKwRvQlFfQiNlhekdrallesikdylkvgkiHiSgknLvQyRiQtfdeltilikhlkeyplvskkradfelfntahkliknnehlnkeginklvslkaslnlglsslklafpnviatrlnipdphwlsgfasaegCfMvgiAkSsAsstgyQvYltfIlTqhvrdenlmkclvdyfnwgRlarKRnVyEyQvkfsdvekllsffdkypilgekakdlqdfcsvsdlmkskthlteegvakirkikegmnr >4yj0_ABC:Cysteine-rich_DNA_binding_domain,_DM_domain; title=CRYSTAL STRUCTURE OF THE DM DOMAIN OF HUMAN DMRT1 BOUND TO 25MER TARGET DNA organism=Homo sapiens DNA sequence DT(E1):DA(D25) DC(E2):DG(D24) DG(E3):DC(D23) DA(E4):DT(D22) DG(E5):DC(D21) DC(E6):DG(D20) DA(E7):DT(D19) DA(E8):DT(D18) DC(E9):DG(D17) DA(E10):DT(D16) DA(E11):DT(D15) DT(E12):DA(D14) DG(E13):DC(D13) DT(E14):DA(D12) DA(E15):DT(D11) DT(E16):DA(D10) DC(E17):DG(D9) DA(E18):DT(D8) DA(E19):DT(D7) DA(E20):DT(D6) DT(E21):DA(D5) DC(E22):DG(D4) DT(E23):DA(D3) DC(E24):DG(D2) DG(E25):DC(D1) chainA ( 42) ARG111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 chainB ( 4) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 ( 43) ARG111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 47) MET115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 51) VAL119 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 54) ARG122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 ( 55) ARG123 0 0 0 0 0 0 0 0 0 0 0 13 7 2 0 0 0 0 0 0 0 0 0 0 0 chainC ( 4) ARG72 0 0 0 0 0 3 6 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG111 0 0 0 0 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) MET115 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) GLN118 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) VAL119 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG122 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ARG123 0 0 0 0 0 0 0 2 12 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sprlpkcarcrnhgyasplkghkrfcmwrdcqckkcnliaeRqrvmaaqvalrrqqaqeeel/kspRlpkcarcrnhgyasplkghkrfcmwrdcqckkcnliaeRqrvMaaqValRRqqaqeeel/kspRlpkcarcrnhgyasplkghkrfcmwrdcqckkcnliaeRqrvMaaQValRRqqaqeeel >4yj0_C:Cysteine-rich_DNA_binding_domain,_DM_domain; title=CRYSTAL STRUCTURE OF THE DM DOMAIN OF HUMAN DMRT1 BOUND TO 25MER TARGET DNA organism=Homo sapiens DNA sequence DT(E1):DA(D25) DC(E2):DG(D24) DG(E3):DC(D23) DA(E4):DT(D22) DG(E5):DC(D21) DC(E6):DG(D20) DA(E7):DT(D19) DA(E8):DT(D18) DC(E9):DG(D17) DA(E10):DT(D16) DA(E11):DT(D15) DT(E12):DA(D14) DG(E13):DC(D13) DT(E14):DA(D12) DA(E15):DT(D11) DT(E16):DA(D10) DC(E17):DG(D9) DA(E18):DT(D8) DA(E19):DT(D7) DA(E20):DT(D6) DT(E21):DA(D5) DC(E22):DG(D4) DT(E23):DA(D3) DC(E24):DG(D2) DG(E25):DC(D1) chainC ( 4) ARG72 0 0 0 0 0 3 6 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG111 0 0 0 0 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) MET115 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) GLN118 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) VAL119 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG122 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ARG123 0 0 0 0 0 0 0 2 12 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kspRlpkcarcrnhgyasplkghkrfcmwrdcqckkcnliaeRqrvMaaQValRRqqaqeeel >4yln_CDF: title=E. COLI TRANSCRIPTION INITIATION COMPLEX - 17-BP SPACER AND 4-NT RNA organism=ESCHERICHIA COLI DNA sequence DA(111):DT(252) DC(112):DG(251) DT(113):DA(250) DT(114):DA(249) DG(115):DC(248) DA(116):DT(247) DC(117):DG(246) DT(119):DA(244) DC(120):DG(243) DC(121):DG(242) DC(122):DG(241) DC(124):DG(239) DC(125):DG(238) DT(126):DA(237) DC(127):DG(236) DA(128):DT(235) DG(130):DC(233) DT(131):DA(232) DA(132):DT(231) DT(133):DA(230) DG(134):DC(229) DC(135):DG(228) DT(136):DA(227) DA(137):DT(226) DT(138):DA(225) DA(139):DT(224) DA(140):DT(223) DT(141):DA(222) DG(142):DG(221) DT(143):DG(220) DG(144):DA(219) DT(145):DT(218) DG(146):DG(217) DC(147):DC(216) DA(148):DT(215) DG(149):DC(214) DT(150):DA(213) DC(151):DG(212) DT(152):DA(211) DG(153):DC(210) DA(154):DT(29) DC(155):DG(28) DC(157):DG(26) DG(158):DC(25) DG(159):DC(24) chainC (142) ARG143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 4 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 4 1 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 4 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 (495) LYS496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (545) GLU546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 chainD (245) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 chainF ( 18) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ILE457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ILE460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) GLU503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 (457) LEU573 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG584 0 0 0 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) GLU585 0 0 2 5 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG586 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) ARG588 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingteRvivsqlhRspgvffdsdkgkthssgkvlynariipyrgSWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminaKpisaavkeffgSsqlsqFmdqnnplseithkrrisalgpggltrERagfEvrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttDpVRmyMreMgtveLlTregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqfldliqegniglmkavdkfEyrRgYkfSTYaTWWirQaiTrsIadqaRtiripVHmIEtINklNrisRqmlqemgreptpeelaermlmpedkirkvlkiakEpIsmetpigDdeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvtRERiRqieakalrklrhpsrsevlrsfldd >4yln_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=E. COLI TRANSCRIPTION INITIATION COMPLEX - 17-BP SPACER AND 4-NT RNA organism=ESCHERICHIA COLI DNA sequence DC(25):DG(159) DG(26):DG(158) DG(28):DC(157) DT(29):DC(155) DC(210):DA(154) DA(111):DG(153) DG(212):DC(151) DA(213):DT(150) DC(214):DG(149) DT(215):DA(148) DC(216):DC(147) DG(217):DG(146) DT(218):DT(145) DA(219):DG(144) DG(220):DT(143) DG(221):DG(142) DA(222):DT(141) DT(223):DA(140) DT(224):DA(139) DA(225):DT(138) DT(226):DA(137) DA(227):DT(136) DG(228):DC(135) DC(229):DG(134) DA(230):DT(133) DT(231):DA(132) DA(232):DT(131) DC(233):DG(130) DT(235):DA(128) DG(236):DC(127) DA(237):DT(126) DG(238):DC(125) DG(239):DC(124) DG(241):DC(122) DG(242):DC(121) DG(243):DC(120) DA(244):DT(119) DG(246):DC(117) DT(247):DA(116) DC(248):DG(115) DA(249):DT(114) DA(250):DT(113) DG(251):DC(112) chainF ( 18) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ILE457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ILE460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) GLU503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (468) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 1 0 0 (469) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 5 2 0 (470) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 (472) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 prot.sequence aaaqvlssveseigrttDpVRmyMreMgtveLlTregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqfldliqegniglmkavdkfEyrRgYkfSTYaTWWirQaiTrsIadqaRtiripVHmIEtINklNrisRqmlqemgreptpeelaermlmpedkirkvlkiakEpIsmetpigDdeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvtRERiRqieakalrklrhpsrsevlrsfldd >4yln_IJL: title=E. COLI TRANSCRIPTION INITIATION COMPLEX - 17-BP SPACER AND 4-NT RNA organism=ESCHERICHIA COLI DNA sequence DA(411):DT(552) DC(412):DG(551) DT(413):DA(550) DT(414):DA(549) DG(415):DC(548) DA(416):DT(547) DC(417):DG(546) DA(418):DT(545) DT(419):DA(544) DC(420):DG(543) DC(421):DG(542) DC(422):DG(541) DA(423):DT(540) DC(424):DG(539) DC(425):DG(538) DT(426):DA(537) DC(427):DG(536) DA(428):DT(535) DC(429):DG(534) DG(430):DC(533) DT(431):DA(532) DA(432):DT(531) DT(433):DA(530) DG(434):DC(529) DC(435):DG(528) DT(436):DA(527) DA(437):DT(526) DT(438):DA(525) DA(439):DT(524) DA(440):DT(523) DT(441):DA(522) DG(442):DG(521) DT(443):DG(520) DG(444):DA(519) DT(445):DT(518) DG(446):DG(517) DC(447):DC(516) DA(448):DT(515) DG(449):DC(514) DT(450):DA(513) DC(451):DG(512) DT(452):DA(511) DG(453):DC(510) DA(454):DT(59) DC(455):DG(58) DG(456):DC(57) DC(457):DG(56) DG(459):DC(54) chainI (142) ARG143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 24 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 1 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 4 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) LYS496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 20 0 0 0 0 0 0 0 0 chainJ (300) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 chainL ( 18) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 18 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ILE460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) GLU503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (457) LEU573 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (458) GLU574 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG584 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) GLU585 0 0 1 6 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG586 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) ARG588 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingteRvivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminaKpisaavkEffgSsqlsqFmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttDpvRmyMreMgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqFldliqegniglmkavdkFeyrRgYKfSTYaTWWiRQaiTrsIadqaRtiripVHmiEtINklNrisRqmlqemgreptpeelaermlmpedkirkvlkiakEpIsmeTpigDdeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLEevgkqfdvtRERiRqieakalrklrhpsrsevlrsfldd >4yln_OPR: title=E. COLI TRANSCRIPTION INITIATION COMPLEX - 17-BP SPACER AND 4-NT RNA organism=ESCHERICHIA COLI DNA sequence DA(711):DT(852) DC(712):DG(851) DT(713):DA(850) DT(714):DA(849) DG(715):DC(848) DA(716):DT(847) DC(717):DG(846) DA(718):DT(845) DT(719):DA(844) DC(720):DG(843) DC(721):DG(842) DC(722):DG(841) DA(723):DT(840) DC(724):DG(839) DC(725):DG(838) DT(726):DA(837) DC(727):DG(836) DA(728):DT(835) DC(729):DG(834) DG(730):DC(833) DT(731):DA(832) DA(732):DT(831) DT(733):DA(830) DG(734):DC(829) DC(735):DG(828) DT(736):DA(827) DA(737):DT(826) DT(738):DA(825) DA(739):DT(824) DA(740):DT(823) DT(741):DA(822) DG(742):DG(821) DT(743):DG(820) DG(744):DA(819) DT(745):DT(818) DG(746):DG(817) DC(747):DC(816) DA(748):DT(815) DG(749):DC(814) DT(750):DA(813) DC(751):DG(812) DT(752):DA(811) DA(754):DT(89) DC(755):DG(88) DC(757):DG(86) DG(759):DC(85) chainO (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 10 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 2 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (472) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (495) LYS496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 (1262) ALA1263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainP (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainR ( 18) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ILE460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (457) LEU573 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (458) GLU574 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG584 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) GLU585 0 0 1 3 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG586 0 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) ARG588 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveRavkerlslgdldtlmpqdminaKpisaavkeffgSsqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkAqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttDpVRmyMreMgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqfldliqegniglmkavdkfeyrRgYKfSTYaTWWiRQaiTrsiadqaRtiripVHmiEtINklNrisrqmlqemgreptpeelaermlmpedkirkvlkiaKepIsmeTpIgDdeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLEevgkqfdvtRERiRqieakalrklrhpsrsevlrsfldd >4ylo_CDF: title=E. COLI TRANSCRIPTION INITIATION COMPLEX - 16-BP SPACER AND 4-NT RNA organism=ESCHERICHIA COLI DNA sequence DA(112):DT(251) DC(113):DG(250) DT(114):DA(249) DT(115):DA(248) DG(116):DC(247) DA(117):DT(246) DC(118):DG(245) DA(119):DT(244) DT(120):DA(243) DC(121):DG(242) DC(122):DG(241) DA(123):DT(240) DC(124):DG(239) DC(125):DG(238) DT(126):DA(237) DC(127):DG(236) DA(128):DT(235) DC(129):DG(234) DG(130):DC(233) DT(131):DA(232) DA(132):DT(231) DT(133):DA(230) DG(134):DC(229) DC(135):DG(228) DT(136):DA(227) DA(137):DT(226) DT(138):DA(225) DA(139):DT(224) DA(140):DT(223) DT(141):DA(222) DG(142):DG(221) DT(143):DG(220) DG(144):DA(219) DT(145):DT(218) DG(146):DG(217) DC(147):DC(216) DA(148):DT(215) DG(149):DC(214) DT(150):DA(213) DC(151):DG(212) DT(152):DA(211) DA(154):DT(29) DC(155):DG(28) DG(156):DC(27) DC(157):DG(26) DG(158):DC(25) DG(159):DC(24) chainC (142) ARG143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 4 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 1 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) LYS496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 11 0 0 0 0 0 0 0 0 (545) GLU546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 chainD (245) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 chainF ( 18) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) LYS392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 26 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ILE460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (457) LEU573 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (458) GLU574 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG584 0 0 0 1 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) GLU585 0 0 0 0 15 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG586 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) ARG588 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingteRvivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminaKpisaavkEffgSsqlsqFmdqnnplseithkrrisalgpggltrERagfEvrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttDpVRmyMreMgtveLlTregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiaKkytnrglqfldliqegniglmkavdkfeyrRgYKfSTYaTWWirQaiTrsiadqartiripVHmiEtINklNrisRqmlqemgreptpeelaermlmpedkirkvlkiaKepIsmeTpigDdeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLEevgkqfdvtRERiRqieakalrklrhpsrsevlrsfldd >4ylo_IJL: title=E. COLI TRANSCRIPTION INITIATION COMPLEX - 16-BP SPACER AND 4-NT RNA organism=ESCHERICHIA COLI DNA sequence DA(412):DT(551) DC(413):DG(550) DT(414):DA(549) DT(415):DA(548) DG(416):DC(547) DA(417):DT(546) DC(418):DG(545) DA(419):DT(544) DT(420):DA(543) DC(421):DG(542) DC(422):DG(541) DA(423):DT(540) DC(424):DG(539) DC(425):DG(538) DT(426):DA(537) DC(427):DG(536) DA(428):DT(535) DC(429):DG(534) DG(430):DC(533) DT(431):DA(532) DA(432):DT(531) DT(433):DA(530) DG(434):DC(529) DC(435):DG(528) DT(436):DA(527) DA(437):DT(526) DT(438):DA(525) DA(439):DT(524) DA(440):DT(523) DT(441):DA(522) DG(442):DG(521) DT(443):DG(520) DG(444):DA(519) DT(445):DT(518) DG(446):DG(517) DC(447):DC(516) DA(448):DT(515) DG(449):DC(514) DT(450):DA(513) DC(451):DG(512) DT(452):DA(511) DG(453):DC(510) DA(454):DT(59) DC(455):DG(58) DG(456):DC(57) DC(457):DG(56) DG(459):DC(54) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 23 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 2 1 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (369) MET370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 (472) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) LYS496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 10 0 0 0 0 0 0 0 0 (545) GLU546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 chainJ (300) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) ARG322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (918) MET932 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainL ( 18) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) LYS392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 28 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ILE460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (349) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) GLU503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) PRO510 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (398) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (401) SER517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) LEU573 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (458) GLU574 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) THR583 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) GLU585 0 0 1 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG586 3 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (473) GLN589 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmMRpgEPptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveRavkerlslgdldtlmpqdminaKpisaavkeffgSsqlsqFmdqnnplseithkrrisalgpggltrERagfEvrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsNkRplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltMrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttDpVRmyMreMgtveLlTregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiaKkytnrglqFldliqegniglmkavdkFeyrRgYKfSTYaTWWirQaiTrsIadqaRtiripVHmiEtINklNRisRqmlqemgreptpeelaermlmpedkirkvlkiaKEpIsmeTPIgDDeDShlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLEevgkqfdvTrERirQieakalrklrhpsrsevlrsfldd >4ylo_OPR: title=E. COLI TRANSCRIPTION INITIATION COMPLEX - 16-BP SPACER AND 4-NT RNA organism=ESCHERICHIA COLI DNA sequence DG(83):DC(760) DC(84):DG(759) DC(85):DG(758) DG(86):DC(757) DC(87):DG(756) DG(88):DC(755) DT(89):DA(754) DC(810):DG(753) DA(811):DT(752) DG(812):DC(751) DA(813):DT(750) DC(814):DG(749) DT(815):DA(748) DC(816):DC(747) DG(817):DG(746) DT(818):DT(745) DA(819):DG(744) DG(820):DT(743) DG(821):DG(742) DA(822):DT(741) DT(823):DA(740) DT(824):DA(739) DA(825):DT(738) DT(826):DA(737) DA(827):DT(736) DG(828):DC(735) DC(829):DG(734) DA(830):DT(733) DT(831):DA(732) DA(832):DT(731) DC(833):DG(730) DG(834):DC(729) DT(835):DC(727) DA(837):DT(726) DG(838):DC(725) DG(839):DC(724) DT(840):DA(723) DG(841):DC(722) DG(842):DC(721) DA(843):DT(720) DT(844):DA(719) DG(845):DC(718) DT(846):DA(717) DC(847):DG(716) DA(848):DT(715) DA(849):DT(714) DG(850):DC(713) DT(851):DA(712) chainO (142) ARG143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 13 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 5 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) MET370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (376) THR377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) LYS496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 1 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (545) GLU546 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 18) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) LYS392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ILE457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ILE460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (349) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 (458) GLU574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (467) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (468) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 4 0 0 0 (469) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 1 0 0 0 (470) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 (472) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingteRvivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmMRpgEPpTreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnrrirsvgemaenqfrvglvRveRavkerlslgdldtlmpqdminaKpisaavkeffgssqlsqFmdqnnplseithkrrisalgpggltrERagfEvrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttDpVrmyMreMgtveLlTregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiaKkytnrglqfldliqegniglmkavdkFeyrRgYKfSTYaTWWirQaitRsiadqaRtiripVHmIEtINklNRisRqmlqemgreptpeelaermlmpedkirkvlkiaKepIsmeTpigDdedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLEevgkqfdvTRERiRqieakalrklrhpsrsevlrsfldd >4ylo_R:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=E. COLI TRANSCRIPTION INITIATION COMPLEX - 16-BP SPACER AND 4-NT RNA organism=? DNA sequence DG(83):DC(760) DC(84):DG(759) DC(85):DG(758) DG(86):DC(757) DC(87):DG(756) DG(88):DC(755) DT(89):DA(754) DC(810):DG(753) DA(811):DT(752) DG(812):DC(751) DA(813):DT(750) DC(814):DG(749) DT(815):DA(748) DC(816):DC(747) DG(817):DG(746) DT(818):DT(745) DA(819):DG(744) DG(820):DT(743) DG(821):DG(742) DA(822):DT(741) DT(823):DA(740) DT(824):DA(739) DA(825):DT(738) DT(826):DA(737) DA(827):DT(736) DG(828):DC(735) DC(829):DG(734) DA(830):DT(733) DT(831):DA(732) DA(832):DT(731) DC(833):DG(730) DG(834):DC(729) DT(835):DC(727) DA(837):DT(726) DG(838):DC(725) DG(839):DC(724) DT(840):DA(723) DG(841):DC(722) DG(842):DC(721) DA(843):DT(720) DT(844):DA(719) DG(845):DC(718) DT(846):DA(717) DC(847):DG(716) DA(848):DT(715) DA(849):DT(714) DG(850):DC(713) DT(851):DA(712) chainR ( 18) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) LYS392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ILE457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ILE460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (349) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 (458) GLU574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (467) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (468) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 4 0 0 0 (469) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 1 0 0 0 (470) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 (472) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence aaaqvlssveseigrttDpVrmyMreMgtveLlTregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiaKkytnrglqfldliqegniglmkavdkFeyrRgYKfSTYaTWWirQaitRsiadqaRtiripVHmIEtINklNRisRqmlqemgreptpeelaermlmpedkirkvlkiaKepIsmeTpigDdedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLEevgkqfdvTRERiRqieakalrklrhpsrsevlrsfldd >4ylp_CDF: title=E. COLI TRANSCRIPTION INITIATION COMPLEX - 16-BP SPACER AND 5-NT RNA organism=ESCHERICHIA COLI DNA sequence DA(112):DT(251) DC(113):DG(250) DT(114):DA(249) DT(115):DA(248) DG(116):DC(247) DA(117):DT(246) DC(118):DG(245) DA(119):DT(244) DT(120):DA(243) DC(121):DG(242) DC(122):DG(241) DA(123):DT(240) DC(124):DG(239) DC(125):DG(238) DT(126):DA(237) DC(127):DG(236) DA(128):DT(235) DC(129):DG(234) DG(130):DC(233) DT(131):DA(232) DA(132):DT(231) DT(133):DA(230) DG(134):DC(229) DC(135):DG(228) DT(136):DA(227) DA(137):DT(226) DT(138):DA(225) DA(139):DT(224) DA(140):DT(223) DT(141):DA(222) DG(142):DG(221) DT(143):DG(220) DG(144):DA(219) DT(145):DT(218) DG(146):DG(217) DC(147):DC(216) DA(148):DT(215) DG(149):DC(214) DT(150):DA(213) DC(151):DG(212) DT(152):DA(211) DG(153):DC(210) DC(155):DG(28) DG(156):DC(27) DC(157):DG(26) DG(158):DC(25) DG(159):DC(24) DC(160):DG(23) chainC (142) ARG143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 1 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (379) ALA380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (495) LYS496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 21 0 0 0 0 0 0 0 0 chainD (245) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (918) MET932 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 chainF ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 18 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ILE460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (398) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 (458) GLU574 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) THR583 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG584 0 0 0 5 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) GLU585 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG586 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingteRvivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreAaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminaKpisaavkeffgssqlsqFmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltMrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttdpvRmyMreMgtveLlTregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqFldliqegniglmkavdkFEyrRgyKfSTYaTWWirQaiTRsIadqaRtiripVHmiEtINklNrisRqmlqemgreptpeelaermlmpedkirkvlkiaKepIsmetpigDDeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytlEevgkqfdvTRERirqieakalrklrhpsrsevlrsfldd >4ylp_IJL: title=E. COLI TRANSCRIPTION INITIATION COMPLEX - 16-BP SPACER AND 5-NT RNA organism=ESCHERICHIA COLI DNA sequence DA(412):DT(551) DC(413):DG(550) DT(414):DA(549) DT(415):DA(548) DG(416):DC(547) DA(417):DT(546) DC(418):DG(545) DA(419):DT(544) DT(420):DA(543) DC(421):DG(542) DC(422):DG(541) DA(423):DT(540) DC(424):DG(539) DC(425):DG(538) DT(426):DA(537) DC(427):DG(536) DA(428):DT(535) DC(429):DG(534) DG(430):DC(533) DT(431):DA(532) DA(432):DT(531) DT(433):DA(530) DG(434):DC(529) DC(435):DG(528) DT(436):DA(527) DA(437):DT(526) DT(438):DA(525) DA(439):DT(524) DA(440):DT(523) DT(441):DA(522) DG(442):DG(521) DT(443):DG(520) DG(444):DA(519) DT(445):DT(518) DG(446):DG(517) DC(447):DC(516) DA(448):DT(515) DG(449):DC(514) DT(450):DA(513) DC(451):DG(512) DT(452):DA(511) DG(453):DC(510) DC(455):DG(58) DG(456):DC(57) DC(457):DG(56) DG(458):DC(55) DG(459):DC(54) DC(460):DG(53) chainI (142) ARG143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 14 6 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 9 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) GLU379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 (1272) MET1273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainJ (245) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainL ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) LYS392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 19 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ILE460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) GLU503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (398) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 (401) SER517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) LEU573 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) THR583 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG584 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) GLU585 0 0 0 4 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG586 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingteRvivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptrEaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkEffgSsqlsqFmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgeMevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttdpvRmyMremgtvellTregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiaKkytnrglqFldliqegniglmkavdkFEyrRgYkfSTYaTWWiRQaiTrsiadqaRtiripVHmiEtINklNrisRqmlqemgreptpeelaermlmpedkirkvlkiaKEpIsmetpigDDeDShlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvTRERirqieakalrklrhpsrsevlrsfldd >4ylp_L:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=E. COLI TRANSCRIPTION INITIATION COMPLEX - 16-BP SPACER AND 5-NT RNA organism=ESCHERICHIA COLI DNA sequence DG(53):DC(460) DC(54):DG(459) DC(55):DG(458) DG(56):DC(457) DC(57):DG(456) DG(58):DC(455) DC(510):DG(453) DA(511):DT(452) DG(512):DC(451) DA(513):DT(450) DC(514):DG(449) DT(515):DA(448) DC(516):DC(447) DG(517):DG(446) DT(518):DT(445) DA(519):DG(444) DG(520):DT(443) DG(521):DG(442) DA(522):DT(441) DT(523):DA(440) DT(524):DA(439) DA(525):DT(438) DT(526):DA(437) DA(527):DT(436) DG(528):DC(435) DC(529):DG(434) DA(530):DT(433) DT(531):DA(432) DA(532):DT(431) DC(533):DG(430) DG(534):DC(429) DT(535):DA(428) DG(536):DC(427) DA(537):DT(426) DG(538):DC(425) DG(539):DC(424) DT(540):DA(423) DG(541):DC(422) DG(542):DC(421) DA(543):DT(420) DT(544):DA(419) DG(545):DC(418) DT(546):DA(417) DC(547):DG(416) DA(548):DT(415) DA(549):DT(414) DG(550):DC(413) DT(551):DA(412) chainL ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) LYS392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 19 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ILE460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) GLU503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (398) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (401) SER517 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (467) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (468) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (469) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 4 0 0 0 (470) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 prot.sequence aaaqvlssveseigrttdpvRmyMremgtvellTregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiaKkytnrglqFldliqegniglmkavdkFEyrRgYkfSTYaTWWiRQaiTrsiadqaRtiripVHmiEtINklNrisRqmlqemgreptpeelaermlmpedkirkvlkiaKEpIsmetpigDDeDShlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvTRERirqieakalrklrhpsrsevlrsfldd >4ylp_OPR: title=E. COLI TRANSCRIPTION INITIATION COMPLEX - 16-BP SPACER AND 5-NT RNA organism=ESCHERICHIA COLI DNA sequence DA(712):DT(851) DC(713):DG(850) DT(714):DA(849) DT(715):DA(848) DG(716):DC(847) DA(717):DT(846) DC(718):DG(845) DA(719):DT(844) DT(720):DA(843) DC(721):DG(842) DC(722):DG(841) DA(723):DT(840) DC(724):DG(839) DC(725):DG(838) DT(726):DA(837) DC(727):DG(836) DA(728):DT(835) DC(729):DG(834) DG(730):DC(833) DT(731):DA(832) DA(732):DT(831) DT(733):DA(830) DG(734):DC(829) DC(735):DG(828) DT(736):DA(827) DA(737):DT(826) DT(738):DA(825) DA(739):DT(824) DA(740):DT(823) DT(741):DA(822) DG(742):DG(821) DT(743):DG(820) DG(744):DA(819) DT(745):DT(818) DG(746):DG(817) DC(747):DC(816) DA(748):DT(815) DG(749):DC(814) DT(750):DA(813) DC(751):DG(812) DT(752):DA(811) DG(753):DC(810) DC(755):DG(88) DG(756):DC(87) DC(757):DG(86) DG(758):DC(85) DG(759):DC(84) DC(760):DG(83) chainO (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 9 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 17 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 chainP (245) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (918) MET932 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 chainR ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) LYS392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ILE457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (398) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (467) THR583 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG584 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) GLU585 0 0 0 0 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG586 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveRavkerlslgdldtlmpqdminakpisaavkeffgssqlsqFmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltMrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttdpvRmyMreMgtveLlTregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiaKkytnrglqFldliqegniglmkavdkfeyrRgYKfSTYaTWWirQaiTrsIadqaRtiripVHmIEtiNklNrisRqmlqemgreptpeelaermlmpedkirkvlkiaKepIsmeTpIgdDeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvTRERirqieakalrklrhpsrsevlrsfldd >4ym5_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME CONTAINING 6-4PP (INSIDE) organism=HOMO SAPIENS DNA sequence DA(J1):DT(I144) DT(J2):DA(I143) DC(J3):DG(I142) DA(J4):DT(I141) DA(J5):DT(I140) DT(J6):DA(I139) DA(J7):DT(I138) DT(J8):DA(I137) DC(J9):DG(I136) DC(J10):DG(I135) DA(J11):DT(I134) DC(J12):DG(I133) DC(J13):DG(I132) DT(J14):DA(I131) DG(J15):DC(I130) DC(J16):DG(I129) DA(J17):DT(I128) DG(J18):DC(I127) DA(J19):DT(I126) DT(J20):DA(I125) DT(J21):DA(I124) DC(J22):DG(I123) DT(J23):DA(I122) DA(J24):DT(I121) DC(J25):DG(I120) DC(J26):DG(I119) DA(J27):DT(I118) DA(J28):DT(I117) DG(J30):DC(I114) DT(J31):DA(I113) DG(J32):DC(I112) DT(J33):DA(I111) DA(J34):DT(I110) DT(J35):DA(I109) DT(J36):DA(I108) DT(J37):DA(I107) DG(J38):DC(I106) DG(J39):DC(I105) DA(J40):DT(I104) DA(J41):DT(I103) DA(J42):DT(I102) DC(J43):DG(I101) DT(J44):DA(I100) DG(J45):DC(I99) DC(J46):DG(I98) DT(J47):DA(I97) DC(J48):DG(I96) DC(J49):DG(I95) DA(J50):DT(I94) DT(J51):DA(I93) DC(J52):DG(I92) DA(J53):DT(I91) DA(J54):DT(I90) DA(J55):DT(I89) DA(J56):DT(I88) DG(J57):DC(I87) DG(J58):DC(I86) DC(J59):DG(I85) DA(J60):DT(I84) DT(J61):DA(I83) DG(J62):DC(I82) DT(J63):DA(I81) DT(J64):DA(I80) DC(J65):DG(I79) DA(J66):DT(I78) DG(J67):DC(I77) DC(J68):DG(I76) DT(J69):DA(I75) DG(J70):DC(I74) DG(J71):DC(I73) DT(J72):DA(I72) DT(J73):DA(I71) DC(J74):DG(I70) DA(J75):DT(I69) DG(J76):DC(I68) DC(J77):DG(I67) DT(J78):DA(I66) DG(J79):DC(I65) DA(J80):DT(I64) DA(J81):DT(I63) DC(J82):DG(I62) DA(J83):DT(I61) DT(J84):DA(I60) DG(J85):DC(I59) DC(J86):DG(I58) DC(J87):DG(I57) DT(J88):DA(I56) DT(J89):DA(I55) DT(J90):DA(I54) DT(J91):DA(I53) DG(J92):DC(I52) DA(J93):DT(I51) DT(J94):DA(I50) DG(J95):DC(I49) DG(J96):DC(I48) DA(J97):DT(I47) DG(J98):DC(I46) DC(J99):DG(I45) DA(J100):DT(I44) DG(J101):DC(I43) DT(J102):DA(I42) DT(J103):DA(I41) DT(J104):DA(I40) DC(J105):DG(I39) DC(J106):DG(I38) DA(J107):DT(I37) DA(J108):DT(I36) DA(J109):DT(I35) DT(J110):DA(I34) DA(J111):DT(I33) DC(J112):DG(I32) DA(J113):DT(I31) DC(J114):DG(I30) DT(J117):DA(I28) DT(J118):DA(I27) DG(J119):DC(I26) DG(J120):DC(I25) DT(J121):DA(I24) DA(J122):DT(I23) DG(J123):DC(I22) DA(J124):DT(I21) DA(J125):DT(I20) DT(J126):DA(I19) DC(J127):DG(I18) DT(J128):DA(I17) DG(J129):DC(I16) DC(J130):DG(I15) DA(J131):DT(I14) DG(J132):DC(I13) DG(J133):DC(I12) DT(J134):DA(I11) DG(J135):DC(I10) DG(J136):DC(I9) DA(J137):DT(I8) DT(J138):DA(I7) DA(J139):DT(I6) DT(J140):DA(I5) DT(J141):DA(I4) DG(J142):DC(I3) DA(J143):DT(I2) DT(J144):DA(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/srkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiQtavrlllpgelakhavsegtkavtkytsa/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkRsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4ym5_G:Histone-fold; title=CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME CONTAINING 6-4PP (INSIDE) organism=? DNA sequence DA(J1):DT(I144) DT(J2):DA(I143) DC(J3):DG(I142) DA(J4):DT(I141) DA(J5):DT(I140) DT(J6):DA(I139) DA(J7):DT(I138) DT(J8):DA(I137) DC(J9):DG(I136) DC(J10):DG(I135) DA(J11):DT(I134) DC(J12):DG(I133) DC(J13):DG(I132) DT(J14):DA(I131) DG(J15):DC(I130) DC(J16):DG(I129) DA(J17):DT(I128) DG(J18):DC(I127) DA(J19):DT(I126) DT(J20):DA(I125) DT(J21):DA(I124) DC(J22):DG(I123) DT(J23):DA(I122) DA(J24):DT(I121) DC(J25):DG(I120) DC(J26):DG(I119) DA(J27):DT(I118) DA(J28):DT(I117) DG(J30):DC(I114) DT(J31):DA(I113) DG(J32):DC(I112) DT(J33):DA(I111) DA(J34):DT(I110) DT(J35):DA(I109) DT(J36):DA(I108) DT(J37):DA(I107) DG(J38):DC(I106) DG(J39):DC(I105) DA(J40):DT(I104) DA(J41):DT(I103) DA(J42):DT(I102) DC(J43):DG(I101) DT(J44):DA(I100) DG(J45):DC(I99) DC(J46):DG(I98) DT(J47):DA(I97) DC(J48):DG(I96) DC(J49):DG(I95) DA(J50):DT(I94) DT(J51):DA(I93) DC(J52):DG(I92) DA(J53):DT(I91) DA(J54):DT(I90) DA(J55):DT(I89) DA(J56):DT(I88) DG(J57):DC(I87) DG(J58):DC(I86) DC(J59):DG(I85) DA(J60):DT(I84) DT(J61):DA(I83) DG(J62):DC(I82) DT(J63):DA(I81) DT(J64):DA(I80) DC(J65):DG(I79) DA(J66):DT(I78) DG(J67):DC(I77) DC(J68):DG(I76) DT(J69):DA(I75) DG(J70):DC(I74) DG(J71):DC(I73) DT(J72):DA(I72) DT(J73):DA(I71) DC(J74):DG(I70) DA(J75):DT(I69) DG(J76):DC(I68) DC(J77):DG(I67) DT(J78):DA(I66) DG(J79):DC(I65) DA(J80):DT(I64) DA(J81):DT(I63) DC(J82):DG(I62) DA(J83):DT(I61) DT(J84):DA(I60) DG(J85):DC(I59) DC(J86):DG(I58) DC(J87):DG(I57) DT(J88):DA(I56) DT(J89):DA(I55) DT(J90):DA(I54) DT(J91):DA(I53) DG(J92):DC(I52) DA(J93):DT(I51) DT(J94):DA(I50) DG(J95):DC(I49) DG(J96):DC(I48) DA(J97):DT(I47) DG(J98):DC(I46) DC(J99):DG(I45) DA(J100):DT(I44) DG(J101):DC(I43) DT(J102):DA(I42) DT(J103):DA(I41) DT(J104):DA(I40) DC(J105):DG(I39) DC(J106):DG(I38) DA(J107):DT(I37) DA(J108):DT(I36) DA(J109):DT(I35) DT(J110):DA(I34) DA(J111):DT(I33) DC(J112):DG(I32) DA(J113):DT(I31) DC(J114):DG(I30) DT(J117):DA(I28) DT(J118):DA(I27) DG(J119):DC(I26) DG(J120):DC(I25) DT(J121):DA(I24) DA(J122):DT(I23) DG(J123):DC(I22) DA(J124):DT(I21) DA(J125):DT(I20) DT(J126):DA(I19) DC(J127):DG(I18) DT(J128):DA(I17) DG(J129):DC(I16) DC(J130):DG(I15) DA(J131):DT(I14) DG(J132):DC(I13) DG(J133):DC(I12) DT(J134):DA(I11) DG(J135):DC(I10) DG(J136):DC(I9) DA(J137):DT(I8) DT(J138):DA(I7) DA(J139):DT(I6) DT(J140):DA(I5) DT(J141):DA(I4) DG(J142):DC(I3) DA(J143):DT(I2) DT(J144):DA(I1) chainG ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence trssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >4ym6_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME CONTAINING 6-4PP (OUTSIDE) organism=HOMO SAPIENS DNA sequence DA(I1):DT(J290) DT(I2):DA(J289) DC(I3):DG(J288) DA(I4):DT(J287) DA(I5):DT(J286) DT(I6):DA(J285) DA(I7):DT(J284) DT(I8):DA(J283) DC(I9):DG(J282) DC(I10):DG(J281) DA(I11):DT(J280) DC(I12):DG(J279) DC(I13):DG(J278) DT(I14):DA(J277) DG(I15):DC(J276) DC(I16):DG(J275) DA(I17):DT(J274) DG(I18):DC(J273) DA(I19):DT(J272) DT(I20):DA(J271) DT(I21):DA(J270) DC(I22):DG(J269) DT(I23):DA(J268) DA(I24):DT(J267) DC(I25):DG(J266) DC(I26):DG(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J261) DT(I32):DA(J260) DG(I33):DC(J259) DT(I34):DA(J258) DA(I35):DT(J257) DT(I36):DA(J256) DT(I37):DA(J255) DT(I38):DA(J254) DG(I39):DC(J253) DG(I40):DC(J252) DA(I41):DT(J251) DA(I42):DT(J250) DA(I43):DT(J249) DC(I44):DG(J248) DT(I45):DA(J247) DG(I46):DC(J246) DC(I47):DG(J245) DT(I48):DA(J244) DC(I49):DG(J243) DC(I50):DG(J242) DA(I51):DT(J241) DT(I52):DA(J240) DC(I53):DG(J239) DA(I54):DT(J238) DA(I55):DT(J237) DA(I56):DT(J236) DA(I57):DT(J235) DG(I58):DC(J234) DG(I59):DC(J233) DC(I60):DG(J232) DA(I61):DT(J231) DT(I62):DA(J230) DG(I63):DC(J229) DT(I64):DA(J228) DT(I65):DA(J227) DC(I66):DG(J226) DA(I67):DT(J225) DG(I68):DC(J224) DC(I69):DG(J223) DT(I70):DA(J222) DG(I71):DC(J221) DA(I72):DT(J220) DA(I73):DT(J219) DT(I74):DA(J218) DT(I75):DA(J217) DC(I76):DG(J216) DA(I77):DT(J215) DG(I78):DC(J214) DC(I79):DG(J213) DT(I80):DA(J212) DG(I81):DC(J211) DA(I82):DT(J210) DA(I83):DT(J209) DC(I84):DG(J208) DA(I85):DT(J207) DT(I86):DA(J206) DG(I87):DC(J205) DC(I88):DG(J204) DC(I89):DG(J203) DT(I90):DA(J202) DT(I91):DA(J201) DT(I92):DA(J200) DT(I93):DA(J199) DG(I94):DC(J198) DA(I95):DT(J197) DT(I96):DA(J196) DG(I97):DC(J195) DG(I98):DC(J194) DA(I99):DT(J193) DG(I100):DC(J192) DC(I101):DG(J191) DA(I102):DT(J190) DG(I103):DC(J189) DT(I104):DA(J188) DT(I105):DA(J187) DT(I106):DA(J186) DC(I107):DG(J185) DC(I108):DG(J184) DA(I109):DT(J183) DA(I110):DT(J182) DA(I111):DT(J181) DT(I112):DA(J180) DA(I113):DT(J179) DC(I114):DG(J178) DA(I115):DT(J177) DC(I116):DG(J176) DT(I118):DA(J173) DT(I119):DA(J172) DG(I120):DC(J171) DG(I121):DC(J170) DT(I122):DA(J169) DA(I123):DT(J168) DG(I124):DC(J167) DA(I125):DT(J166) DA(I126):DT(J165) DT(I127):DA(J164) DC(I128):DG(J163) DT(I129):DA(J162) DG(I130):DC(J161) DC(I131):DG(J160) DA(I132):DT(J159) DG(I133):DC(J158) DG(I134):DC(J157) DT(I135):DA(J156) DG(I136):DC(J155) DG(I137):DC(J154) DA(I138):DT(J153) DT(I139):DA(J152) DA(I140):DT(J151) DT(I141):DA(J150) DT(I142):DA(J149) DG(I143):DC(J148) DA(I144):DT(J147) DT(I145):DA(J146) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) LYS37 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) HIS39 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/KpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/RkVLrdniqgitkpairrlarrggvkriSgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/KtRSsraglqfpvgrvhrllrkgnyserVgagapvylaavleyltaEilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/Rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >4ym6_H:Histone-fold; title=CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME CONTAINING 6-4PP (OUTSIDE) organism=HOMO SAPIENS DNA sequence DA(J146):DT(I145) DT(J147):DA(I144) DC(J148):DG(I143) DA(J149):DT(I142) DA(J150):DT(I141) DT(J151):DA(I140) DA(J152):DT(I139) DT(J153):DA(I138) DC(J154):DG(I137) DC(J155):DG(I136) DA(J156):DT(I135) DC(J157):DG(I134) DC(J158):DG(I133) DT(J159):DA(I132) DG(J160):DC(I131) DC(J161):DG(I130) DA(J162):DT(I129) DG(J163):DC(I128) DA(J164):DT(I127) DT(J165):DA(I126) DT(J166):DA(I125) DC(J167):DG(I124) DT(J168):DA(I123) DA(J169):DT(I122) DC(J170):DG(I121) DC(J171):DG(I120) DA(J174):DT(I119) DA(J175):DT(I118) DG(J176):DC(I116) DT(J177):DA(I115) DG(J178):DC(I114) DT(J179):DA(I113) DA(J180):DT(I112) DT(J181):DA(I111) DT(J182):DA(I110) DT(J183):DA(I109) DG(J184):DC(I108) DG(J185):DC(I107) DA(J186):DT(I106) DA(J187):DT(I105) DA(J188):DT(I104) DC(J189):DG(I103) DT(J190):DA(I102) DG(J191):DC(I101) DC(J192):DG(I100) DT(J193):DA(I99) DC(J194):DG(I98) DC(J195):DG(I97) DA(J196):DT(I96) DT(J197):DA(I95) DC(J198):DG(I94) DA(J199):DT(I93) DA(J200):DT(I92) DA(J201):DT(I91) DA(J202):DT(I90) DG(J203):DC(I89) DG(J204):DC(I88) DC(J205):DG(I87) DA(J206):DT(I86) DT(J207):DA(I85) DG(J208):DC(I84) DT(J209):DA(I83) DT(J210):DA(I82) DC(J211):DG(I81) DA(J212):DT(I80) DG(J213):DC(I79) DC(J214):DG(I78) DT(J215):DA(I77) DG(J216):DC(I76) DA(J217):DT(I75) DA(J218):DT(I74) DT(J219):DA(I73) DT(J220):DA(I72) DC(J221):DG(I71) DA(J222):DT(I70) DG(J223):DC(I69) DC(J224):DG(I68) DT(J225):DA(I67) DG(J226):DC(I66) DA(J227):DT(I65) DA(J228):DT(I64) DC(J229):DG(I63) DA(J230):DT(I62) DT(J231):DA(I61) DG(J232):DC(I60) DC(J233):DG(I59) DC(J234):DG(I58) DT(J235):DA(I57) DT(J236):DA(I56) DT(J237):DA(I55) DT(J238):DA(I54) DG(J239):DC(I53) DA(J240):DT(I52) DT(J241):DA(I51) DG(J242):DC(I50) DG(J243):DC(I49) DA(J244):DT(I48) DG(J245):DC(I47) DC(J246):DG(I46) DA(J247):DT(I45) DG(J248):DC(I44) DT(J249):DA(I43) DT(J250):DA(I42) DT(J251):DA(I41) DC(J252):DG(I40) DC(J253):DG(I39) DA(J254):DT(I38) DA(J255):DT(I37) DA(J256):DT(I36) DT(J257):DA(I35) DA(J258):DT(I34) DC(J259):DG(I33) DA(J260):DT(I32) DC(J261):DG(I31) DT(J263):DA(I28) DT(J264):DA(I27) DG(J265):DC(I26) DG(J266):DC(I25) DT(J267):DA(I24) DA(J268):DT(I23) DG(J269):DC(I22) DA(J270):DT(I21) DA(J271):DT(I20) DT(J272):DA(I19) DC(J273):DG(I18) DT(J274):DA(I17) DG(J275):DC(I16) DC(J276):DG(I15) DA(J277):DT(I14) DG(J278):DC(I13) DG(J279):DC(I12) DT(J280):DA(I11) DG(J281):DC(I10) DG(J282):DC(I9) DA(J283):DT(I8) DT(J284):DA(I7) DA(J285):DT(I6) DT(J286):DA(I5) DT(J287):DA(I4) DG(J288):DC(I3) DA(J289):DT(I2) DT(J290):DA(I1) chainH ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >4ymm_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 7BG AS THE TEMPLATE BASE IN A 1-NUCLEOTIDE GAPPED DNA organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 36 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 4 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4ymn_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH N7BG IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE CTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 40 0 0 0 0 ( 29) LYS35 10 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4ymo_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH N7BG IN THE TEMPLATE OPPOSITE TO INCOMING NON-HYDROLYZABLE CTP WITH MANGANESE IN THE ACTIVE SITE organism=Homo sapiens DNA sequence DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 1 6 0 0 0 0 0 0 0 (262) TYR271 8 0 0 0 0 0 0 0 0 0 (274) ARG283 4 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4yn4_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH N7BG IN THE TEMPLATE OPPOSITE TO INCOMING NON-HYDROLYZABLE DTTP WITH MANGANESE IN THE ACTIVE SITE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 39 0 0 0 0 ( 29) LYS35 8 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4yo2_A:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF E2F8, AN ATYPICAL MEMBER OF E2F FAMILY OF TRANSCRIPTION FACTORS organism=Homo sapiens DNA sequence DT(C1):DA(D15) DT(C2):DA(D14) DT(C3):DA(D13) DT(C4):DA(D12) DC(C5):DG(D11) DC(C6):DG(D10) DC(C7):DG(D9) DG(C8):DC(D8) DC(C9):DG(D7) DC(C10):DG(D6) DA(C11):DT(D5) DA(C12):DT(D4) DA(C13):DT(D3) DA(C14):DT(D2) DA(C15):DT(D1) chainA ( 4) ARG113 0 0 0 1 5 4 0 0 0 0 0 0 0 0 0 ( 44) GLU153 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 ( 45) ARG154 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 46) ARG155 0 0 0 0 0 0 0 2 12 14 0 0 0 0 0 ( 47) ARG156 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 ( 49) TYR158 0 0 0 0 0 0 0 0 0 7 14 0 0 0 0 (155) THR310 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 (158) ARG313 0 0 0 0 13 13 5 0 0 0 0 0 0 0 0 (159) ARG314 0 0 0 0 0 2 13 19 0 0 0 0 0 0 0 (161) TYR316 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 prot.sequence qpsRkekslgllchkflarypnypnpavnndicldevaeelnvERRRiYdivnvleslhmvsrlaknrytwhgrhnlnktlgtlksigeenkyaeqimmikkknsrkdkslrvmsqkfvmlflvstpqivslevaakiligedhvedldkskfkTkiRRlYdianvlssldlikkvhvteergrkp >4yoq_A:DNA-glycosylase;Nudix; title=CRYSTAL STRUCTURE OF MUTY BOUND TO ITS ANTI-SUBSTRATE organism=Geobacillus stearothermophilus DNA sequence DA(B2):DT(C22) DG(B3):DC(C21) DA(B4):DT(C20) DC(B5):DG(C19) 8OG(B6):DC(C18) DT(B7):DA(C17) DG(B8):DC(C16) DG(B9):DC(C15) DA(B10):DT(C14) DC(B11):DG(C13) chainA ( 40) GLN48 0 0 0 50 4 4 0 0 0 0 ( 41) THR49 0 0 0 0 5 0 0 0 0 0 ( 42) ARG50 0 0 0 0 0 4 12 5 0 0 ( 80) TYR88 0 0 0 66 46 0 0 0 0 0 ( 83) ARG91 0 0 0 0 1 0 0 0 0 0 (140) MET148 0 0 0 0 5 0 0 0 0 0 (156) CYS164 1 0 0 0 0 0 0 0 0 0 (159) ARG167 0 0 0 0 20 0 0 0 0 0 (193) ARG201 0 0 0 0 0 0 0 0 1 0 (291) PHE307 0 0 0 0 3 0 0 0 0 0 (292) SER308 0 0 0 6 9 1 0 0 0 0 (293) HIS309 0 0 0 8 0 0 0 0 0 0 prot.sequence parefqrdlldwfarerrdlpwrkdrdpykvwvsevmlQQtRvetvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavdgnvMrvlsrlflvtddiakCstRkrfeqivreimayenpgafnealielgalvctpRrpscllcpvqaycqafaegvaeelpvkmvkqvplavavladdegrvlirkrdstgllanlwefpscetdgadgkekleqmvglqveltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >4yp3_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MUTANT HUMAN DNA POLYMERASE ETA Q38A/R61A INSERTING DCTP OPPOSITE AN 8-OXOGUANINE LESION organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (318) SER322 0 0 0 0 0 0 1 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvaykswkgggiiavsyearafgvtasmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqtvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgsslrrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >4yph_A:DNA-glycosylase;Nudix; title=CRYSTAL STRUCTURE OF MUTY BOUND TO ITS ANTI-SUBSTRATE WITH THE DISULFIDE CROSS-LINKER REDUCED organism=Geobacillus stearothermophilus DNA sequence DA(B2):DT(C22) DG(B3):DC(C21) DA(B4):DT(C20) DC(B5):DG(C19) 8OG(B6):DC(C18) DT(B7):DA(C17) DG(B8):DC(C16) DG(B9):DC(C15) DA(B10):DT(C14) DC(B11):DG(C13) chainA ( 40) GLN48 0 0 0 52 4 4 0 0 0 0 ( 41) THR49 0 0 0 0 5 0 0 0 0 0 ( 42) ARG50 0 0 0 0 0 4 14 11 1 0 ( 80) TYR88 0 0 0 68 40 0 0 0 0 0 ( 83) ARG91 0 0 0 0 3 0 0 0 0 0 (140) MET148 0 0 0 0 4 0 0 0 0 0 (159) ARG167 0 0 0 0 19 0 0 0 0 0 (193) ARG201 0 0 0 0 0 0 0 1 4 0 (291) PHE307 0 0 0 0 1 0 0 0 0 0 (292) SER308 0 0 0 6 9 1 0 0 0 0 (293) HIS309 0 0 0 12 0 0 0 0 0 0 prot.sequence parefqrdlldwfarerrdlpwrkdrdpykvwvsevmlQQtRvetvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavdgnvMrvlsrlflvtddiakcstRkrfeqivreimayenpgafnealielgalvctpRrpscllcpvqaycqafaegvaeelpvkmvkqvplavavladdegrvlirkrdstgllanlwefpscetdgadgkekleqmvglqveltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >4ypr_B:DNA-glycosylase;Nudix; title=CRYSTAL STRUCTURE OF D144N MUTY BOUND TO ITS ANTI-SUBSTRATE organism=Geobacillus stearothermophilus DNA sequence DA(F2):DT(E22) DG(F3):DC(E21) DA(F4):DT(E20) DC(F5):DG(E19) 8OG(F6):DC(E18) DT(F7):DA(E17) DG(F8):DC(E16) DG(F9):DC(E15) DA(F10):DT(E14) DC(F11):DG(E13) chainB ( 21) ARG26 0 0 0 0 3 0 0 0 0 0 ( 23) LEU28 0 0 0 0 1 0 0 0 0 0 ( 25) TRP30 0 0 0 0 2 0 0 0 0 0 ( 26) ARG31 0 0 0 0 4 0 0 0 0 0 ( 38) GLU43 0 0 0 0 7 0 0 0 0 0 ( 41) LEU46 0 0 0 0 5 0 0 0 0 0 ( 43) GLN48 0 0 0 52 4 8 0 0 0 0 ( 44) THR49 0 0 0 0 5 0 0 0 0 0 ( 45) ARG50 0 0 0 0 0 0 1 9 0 0 ( 46) VAL51 0 0 0 0 4 0 0 0 0 0 ( 83) TYR88 0 0 0 78 43 0 0 0 0 0 ( 86) ARG91 0 0 0 0 1 0 0 0 0 0 (121) TYR126 0 0 0 0 4 0 0 0 0 0 (141) ASN146 0 0 0 0 1 0 0 0 0 0 (159) CYS164 2 0 0 0 0 0 0 0 0 0 (183) GLU188 0 0 0 0 2 0 0 0 0 0 (186) ILE191 0 0 0 0 7 0 0 0 0 0 (187) GLU192 0 0 0 0 4 0 0 0 0 0 (196) ARG201 0 0 0 0 0 0 0 0 1 0 (296) ALA306 0 0 0 0 0 1 0 0 0 0 (297) PHE307 0 0 0 0 3 0 0 0 0 0 (298) SER308 0 0 0 10 9 1 0 0 0 0 (299) HIS309 0 0 0 12 0 0 0 0 0 0 prot.sequence erfparefqrdlldwfarerRdLpWRkdrdpykvwvsEvmLqQtRVetvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpYtvgavlslaygvpepavngNvmrvlsrlflvtddiakCstrkrfeqivreimayenpgafnEalIElgalvctpRrpscllcpvqaycqafaegvaeelpvkmkktavkqvplavavladdegrvlirkrdstgllanlwefpscetdgadgkekleqmvgqveltepivsfehAfSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >4yqw_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MUTANT HUMAN DNA POLYMERASE ETA Q38A/R61A INSERTING DCTP OPPOSITE TEMPLATE G organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 1 0 (380) ARG382 0 0 14 7 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvaykswkgggiiavsyearafgvtasmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrsslRrccaltrydahkmshdaftvikncntstewsppltmlflcatkfsas >4yr0_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MUTANT HUMAN DNA POLYMERASE ETA R61M INSERTING DCTP OPPOSITE AN 8- OXOGUANINE LESION organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (316) SER322 0 1 0 0 0 0 0 0 (376) ARG382 0 0 0 0 0 0 5 0 prot.sequence phmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtmsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklgqpisadllpstyieglpqvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsewsppltmlflcatkfsas >4yr2_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MUTANT HUMAN DNA POLYMERASE ETA R61M INSERTING DATP OPPOSITE AN 8- OXOGUANINE LESION organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (319) SER322 0 0 0 0 0 0 1 0 (376) ARG382 0 7 1 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtmsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqtvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqlsslRrccaltrydahkmshdaftvikncntstewsppltmlflcatkfsas >4yr3_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MUTANT HUMAN DNA POLYMERASE ETA R61M INSERTING DCTP OPPOSITE TEMPLATE G organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (319) SER322 0 0 0 0 0 0 1 0 (375) ARG382 0 5 1 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtmsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqtvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqlsslRrccaltrydahkmshdaftvikncntsgitewsppltmlflcatkfsas >4yrv_AB:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF ANABAENA TRANSCRIPTION FACTOR HETR COMPLEXED WITH 21-BP DNA FROM HETP PROMOTER organism=Nostoc sp. PCC 7120 DNA sequence DG(C1):DC(D21) DC(C2):DG(D20) DG(C3):DC(D19) DA(C4):DT(D18) DG(C5):DC(D17) DG(C6):DC(D16) DG(C7):DC(D15) DG(C8):DC(D14) DT(C9):DA(D13) DC(C10):DG(D12) DT(C11):DA(D11) DA(C12):DT(D10) DA(C13):DT(D9) DC(C14):DG(D8) DC(C15):DG(D7) DC(C16):DG(D6) DC(C17):DG(D5) DT(C18):DA(D4) DC(C19):DG(D3) DA(C20):DT(D2) DT(C21):DA(D1) chainB ( 59) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 15 0 ( 68) GLU71 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 5 0 0 0 0 0 ( 70) LYS73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 chainA ( 60) ARG62 0 18 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) GLU71 0 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LYS73 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ndidlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkiiveevrqalmegkllktlgsqepryliqfpyvwmeqypwipgrsripgtsltseekrqiehklpsnlpdaqlvtsfeflelieflhkrsqedlppehrmelsealaehikrrllysgtvtridspwgmpfyaltrpfyqertyimvedtaryfrmmkdwaekrpnamraleeldvpperwdeamqeldeiirtwadkyhqvipmilqmvfgrk/didlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkiiveevrqalmegkllktlgsqepryliqfpyvwmeqypwipgrsripgtsltseekrqiehklpsnlpdaqlvtsfeflelieflhkrsqedlppehrmelsealaehikrrllysgtvtridspwgmpfyaltrpfyertyimvedtaryfrmmkdwaekrpnamraleeldvpperwdeamqeldeiirtwadkyhqvpmilqmvfgrke >4yrv_B:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF ANABAENA TRANSCRIPTION FACTOR HETR COMPLEXED WITH 21-BP DNA FROM HETP PROMOTER organism=Nostoc sp. PCC 7120 DNA sequence DA(D1):DT(C21) DT(D2):DA(C20) DG(D3):DC(C19) DA(D4):DT(C18) DG(D5):DC(C17) DG(D6):DC(C16) DG(D7):DC(C15) DG(D8):DC(C14) DT(D9):DA(C13) DT(D10):DA(C12) DA(D11):DT(C11) DG(D12):DC(C10) DA(D13):DT(C9) DC(D14):DG(C8) DC(D15):DG(C7) DC(D16):DG(C6) DC(D17):DG(C5) DT(D18):DA(C4) DC(D19):DG(C3) DG(D20):DC(C2) DC(D21):DG(C1) chainB ( 59) ARG62 0 15 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLU71 0 0 0 0 0 5 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LYS73 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence didlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkiiveevrqalmegkllktlgsqepryliqfpyvwmeqypwipgrsripgtsltseekrqiehklpsnlpdaqlvtsfeflelieflhkrsqedlppehrmelsealaehikrrllysgtvtridspwgmpfyaltrpfyertyimvedtaryfrmmkdwaekrpnamraleeldvpperwdeamqeldeiirtwadkyhqvpmilqmvfgrke >4ys3_ABCDEFGH:Histone-fold;PH_domain-like; title=NUCLEOSOME DISASSEMBLY BY RSC AND SWI/SNF IS ENHANCED BY H3 ACETYLATION NEAR THE NUCLEOSOME DYAD AXIS organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J294) DT(I2):DA(J293) DC(I3):DG(J292) DA(I4):DT(J291) DA(I5):DT(J290) DT(I6):DA(J289) DA(I7):DT(J288) DT(I8):DA(J287) DC(I9):DG(J286) DC(I10):DG(J285) DA(I11):DT(J284) DC(I12):DG(J283) DC(I13):DG(J282) DT(I14):DA(J281) DG(I15):DC(J280) DC(I16):DG(J279) DA(I17):DT(J278) DG(I18):DC(J277) DA(I19):DT(J276) DT(I20):DA(J275) DA(I21):DT(J274) DC(I22):DG(J273) DT(I23):DA(J272) DA(I24):DT(J271) DC(I25):DG(J270) DC(I26):DG(J269) DA(I27):DT(J268) DA(I28):DT(J267) DA(I29):DT(J266) DA(I30):DT(J265) DG(I31):DC(J264) DT(I32):DA(J263) DG(I33):DC(J262) DT(I34):DA(J261) DA(I35):DT(J260) DT(I36):DA(J259) DT(I37):DA(J258) DT(I38):DA(J257) DG(I39):DC(J256) DG(I40):DC(J255) DA(I41):DT(J254) DA(I42):DT(J253) DA(I43):DT(J252) DC(I44):DG(J251) DT(I45):DA(J250) DG(I46):DC(J249) DC(I47):DG(J248) DT(I48):DA(J247) DC(I49):DG(J246) DC(I50):DG(J245) DA(I51):DT(J244) DT(I52):DA(J243) DC(I53):DG(J242) DA(I54):DT(J241) DA(I55):DT(J240) DA(I56):DT(J239) DA(I57):DT(J238) DG(I58):DC(J237) DG(I59):DC(J236) DC(I60):DG(J235) DA(I61):DT(J234) DT(I62):DA(J233) DG(I63):DC(J232) DT(I64):DA(J231) DT(I65):DA(J230) DC(I66):DG(J229) DA(I67):DT(J228) DG(I68):DC(J227) DC(I69):DG(J226) DT(I70):DA(J225) DG(I71):DC(J224) DG(I72):DC(J223) DA(I73):DT(J222) DA(I74):DT(J221) DT(I75):DA(J220) DC(I76):DG(J219) DC(I77):DG(J218) DA(I78):DT(J217) DG(I79):DC(J216) DC(I80):DG(J215) DT(I81):DA(J214) DG(I82):DC(J213) DA(I83):DT(J212) DA(I84):DT(J211) DC(I85):DG(J210) DA(I86):DT(J209) DT(I87):DA(J208) DG(I88):DC(J207) DC(I89):DG(J206) DC(I90):DG(J205) DT(I91):DA(J204) DT(I92):DA(J203) DT(I93):DA(J202) DT(I94):DA(J201) DG(I95):DC(J200) DA(I96):DT(J199) DT(I97):DA(J198) DG(I98):DC(J197) DG(I99):DC(J196) DA(I100):DT(J195) DG(I101):DC(J194) DC(I102):DG(J193) DA(I103):DT(J192) DG(I104):DC(J191) DT(I105):DA(J190) DT(I106):DA(J189) DT(I107):DA(J188) DC(I108):DG(J187) DC(I109):DG(J186) DA(I110):DT(J185) DA(I111):DT(J184) DA(I112):DT(J183) DT(I113):DA(J182) DA(I114):DT(J181) DC(I115):DG(J180) DA(I116):DT(J179) DC(I117):DG(J178) DT(I118):DA(J177) DT(I119):DA(J176) DT(I120):DA(J175) DT(I121):DA(J174) DG(I122):DC(J173) DG(I123):DC(J172) DT(I124):DA(J171) DA(I125):DT(J170) DG(I126):DC(J169) DT(I127):DA(J168) DA(I128):DT(J167) DT(I129):DA(J166) DC(I130):DG(J165) DT(I131):DA(J164) DG(I132):DC(J163) DC(I133):DG(J162) DA(I134):DT(J161) DG(I135):DC(J160) DG(I136):DC(J159) DT(I137):DA(J158) DG(I138):DC(J157) DG(I139):DC(J156) DA(I140):DT(J155) DT(I141):DA(J154) DA(I142):DT(J153) DT(I143):DA(J152) DT(I144):DA(J151) DG(I145):DC(J150) DA(I146):DT(J149) DT(I147):DA(J148) chainA ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 9) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG1230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS639 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR641 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 9) PRO232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 1) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaiharvtimpdiqlarrirgera/dniqgitkPairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaiharvtimpdiqlarrirgera/dniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraGlqfpvgrvhrllRkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4ys3_H:Histone-fold; title=NUCLEOSOME DISASSEMBLY BY RSC AND SWI/SNF IS ENHANCED BY H3 ACETYLATION NEAR THE NUCLEOSOME DYAD AXIS organism=? DNA sequence DA(I1):DT(J294) DT(I2):DA(J293) DC(I3):DG(J292) DA(I4):DT(J291) DA(I5):DT(J290) DT(I6):DA(J289) DA(I7):DT(J288) DT(I8):DA(J287) DC(I9):DG(J286) DC(I10):DG(J285) DA(I11):DT(J284) DC(I12):DG(J283) DC(I13):DG(J282) DT(I14):DA(J281) DG(I15):DC(J280) DC(I16):DG(J279) DA(I17):DT(J278) DG(I18):DC(J277) DA(I19):DT(J276) DT(I20):DA(J275) DA(I21):DT(J274) DC(I22):DG(J273) DT(I23):DA(J272) DA(I24):DT(J271) DC(I25):DG(J270) DC(I26):DG(J269) DA(I27):DT(J268) DA(I28):DT(J267) DA(I29):DT(J266) DA(I30):DT(J265) DG(I31):DC(J264) DT(I32):DA(J263) DG(I33):DC(J262) DT(I34):DA(J261) DA(I35):DT(J260) DT(I36):DA(J259) DT(I37):DA(J258) DT(I38):DA(J257) DG(I39):DC(J256) DG(I40):DC(J255) DA(I41):DT(J254) DA(I42):DT(J253) DA(I43):DT(J252) DC(I44):DG(J251) DT(I45):DA(J250) DG(I46):DC(J249) DC(I47):DG(J248) DT(I48):DA(J247) DC(I49):DG(J246) DC(I50):DG(J245) DA(I51):DT(J244) DT(I52):DA(J243) DC(I53):DG(J242) DA(I54):DT(J241) DA(I55):DT(J240) DA(I56):DT(J239) DA(I57):DT(J238) DG(I58):DC(J237) DG(I59):DC(J236) DC(I60):DG(J235) DA(I61):DT(J234) DT(I62):DA(J233) DG(I63):DC(J232) DT(I64):DA(J231) DT(I65):DA(J230) DC(I66):DG(J229) DA(I67):DT(J228) DG(I68):DC(J227) DC(I69):DG(J226) DT(I70):DA(J225) DG(I71):DC(J224) DG(I72):DC(J223) DA(I73):DT(J222) DA(I74):DT(J221) DT(I75):DA(J220) DC(I76):DG(J219) DC(I77):DG(J218) DA(I78):DT(J217) DG(I79):DC(J216) DC(I80):DG(J215) DT(I81):DA(J214) DG(I82):DC(J213) DA(I83):DT(J212) DA(I84):DT(J211) DC(I85):DG(J210) DA(I86):DT(J209) DT(I87):DA(J208) DG(I88):DC(J207) DC(I89):DG(J206) DC(I90):DG(J205) DT(I91):DA(J204) DT(I92):DA(J203) DT(I93):DA(J202) DT(I94):DA(J201) DG(I95):DC(J200) DA(I96):DT(J199) DT(I97):DA(J198) DG(I98):DC(J197) DG(I99):DC(J196) DA(I100):DT(J195) DG(I101):DC(J194) DC(I102):DG(J193) DA(I103):DT(J192) DG(I104):DC(J191) DT(I105):DA(J190) DT(I106):DA(J189) DT(I107):DA(J188) DC(I108):DG(J187) DC(I109):DG(J186) DA(I110):DT(J185) DA(I111):DT(J184) DA(I112):DT(J183) DT(I113):DA(J182) DA(I114):DT(J181) DC(I115):DG(J180) DA(I116):DT(J179) DC(I117):DG(J178) DT(I118):DA(J177) DT(I119):DA(J176) DT(I120):DA(J175) DT(I121):DA(J174) DG(I122):DC(J173) DG(I123):DC(J172) DT(I124):DA(J171) DA(I125):DT(J170) DG(I126):DC(J169) DT(I127):DA(J168) DA(I128):DT(J167) DT(I129):DA(J166) DC(I130):DG(J165) DT(I131):DA(J164) DG(I132):DC(J163) DC(I133):DG(J162) DA(I134):DT(J161) DG(I135):DC(J160) DG(I136):DC(J159) DT(I137):DA(J158) DG(I138):DC(J157) DG(I139):DC(J156) DA(I140):DT(J155) DT(I141):DA(J154) DA(I142):DT(J153) DT(I143):DA(J152) DT(I144):DA(J151) DG(I145):DC(J150) DA(I146):DT(J149) DT(I147):DA(J148) chainH ( 1) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4z1x_B:Homing_endonucleases; title=CRYSTAL STRUCTURE OF LAGLIDADG HOMING ENDONUCLEASE I-GZEII IN COMPLEX WITH DNA TARGET organism=Fusarium graminearum PH-1 DNA sequence DC(D1):DG(C26) DC(D2):DG(C25) DT(D3):DA(C24) DT(D4):DA(C23) DT(D5):DA(C22) DG(D6):DC(C21) DT(D7):DA(C20) DA(D8):DT(C19) DC(D9):DG(C18) DC(D10):DG(C17) DA(D11):DT(C16) DA(D12):DT(C15) DT(D13):DA(C14) DA(D14):DT(C13) DT(D15):DA(C12) DG(D16):DC(C11) DG(D17):DC(C10) DT(D18):DA(C9) DA(D19):DT(C8) DC(D20):DG(C7) DC(D21):DG(C6) DC(D22):DG(C5) DA(D23):DT(C4) DT(D24):DA(C3) DC(D25):DG(C2) DC(D26):DG(C1) chainB ( 18) MET23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 ( 20) HIS25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 22) GLU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 ( 24) ASN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 29) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 15 0 0 0 ( 31) ARG36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 7 0 0 0 0 ( 35) GLN40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 0 0 ( 37) LYS42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 6 0 0 0 0 0 0 0 0 0 ( 60) ASN65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 65) GLU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 ( 69) LYS74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 ( 71) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 16 0 0 0 0 0 (174) SER179 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) TYR183 0 0 0 0 0 0 4 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR190 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) SER192 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) ARG196 0 0 0 0 0 0 0 1 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) SER198 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ASN220 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) HIS222 0 0 0 0 0 0 0 0 0 12 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) ASN223 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) ALA228 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) VAL232 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) ARG234 0 0 0 0 6 17 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sinpwfvtgftdaegsfMiHlEkNkdkwRvRptfQiKldirdkslleeiknyfnntgsiNtsnkEcvyKvRslkdisiiishfdkynlitqkkadfelfkkiinklnsqehlsyevgatvlqeiisirasmnlglsssvkedfphiipsnrplienmniphpewmagfvsgegSfsvYttsddkYvSlsfRvSqhnkdkqllksfvdffgcggfNyHNkgnkAvifVtRkfedindkiiplfneykikgvkykdfkdwskvakmieskshlttngykeickikenmnsyrk >4z1z_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF MEGANUCLEASE I-SMAMI BOUND TO UNCLEAVEABLE DNA WITH A TTCT CENTRAL FOUR organism=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) / Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) DNA sequence DG(C1):DC(D27) DT(C2):DA(D26) DG(C3):DC(D25) DG(C4):DC(D24) DT(C5):DA(D23) DA(C6):DT(D22) DC(C7):DG(D21) DA(C8):DT(D20) DC(C9):DG(D19) DC(C10):DG(D18) DT(C11):DA(D17) DG(C12):DC(D16) DA(C13):DT(D15) DG(C14):DC(D14) DA(C15):DT(D13) DA(C16):DT(D12) DT(C17):DA(D11) DG(C18):DC(D10) DG(C19):DC(D9) DA(C20):DT(D8) DG(C21):DC(D7) DG(C22):DC(D6) DA(C23):DT(D5) DT(C24):DA(D4) DA(C25):DT(D3) DG(C26):DC(D2) chainA ( 19) MET24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 21) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 12 0 0 0 0 0 ( 23) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 4 0 0 0 0 ( 28) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 0 ( 33) LEU38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 66) SER71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 74) ARG79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 2 0 0 0 0 0 0 (176) LYS183 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ILE185 0 0 0 0 0 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) LYS187 0 0 0 0 0 4 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) SER191 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ILE192 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) GLN197 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) GLN203 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) THR205 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) GLU227 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) SER230 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG231 0 0 0 0 0 0 0 0 0 0 24 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 (229) TYR236 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) THR240 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sklnpwavvgfidaegsfMvRvRknskYktgwLvvaifsvtvdkkdlflleslktffgglgsikkSgnstfsyRiesseqltkiilpffdkysliteklgdyllfkkvlelmgtkehltqrglekivslkasinkglseelqaafpqcvptprpeinnipdpfwlagfvsgdgsfKsIlKkseSIkvgfQsilvfQiTqhardvklmeslisylgcgfiEkdSRgpWlYytvTnfsdiqgkiipffhqykiigskygdyqdwckialimqnknhltpeglneiralkggmnkgr >4z20_D:Homing_endonucleases; title=CRYSTAL STRUCTURE OF MEGANUCLEASE I-SMAMI BOUND TO UNCLEAVEABLE DNA WITH A TTGT CENTRAL FOUR organism=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) / Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) DNA sequence DG(E1):DC(F25) DG(E2):DC(F24) DG(E3):DC(F23) DT(E4):DA(F22) DA(E5):DT(F21) DC(E6):DG(F20) DA(E7):DT(F19) DC(E8):DG(F18) DC(E9):DG(F17) DT(E10):DA(F16) DG(E11):DC(F15) DA(E12):DT(F14) DC(E13):DG(F13) DA(E14):DT(F12) DA(E15):DT(F11) DT(E16):DA(F10) DG(E17):DC(F9) DG(E18):DC(F8) DA(E19):DT(F7) DG(E20):DC(F6) DG(E21):DC(F5) DA(E22):DT(F4) DT(E23):DA(F3) DA(E24):DT(F2) DG(E25):DC(F1) chainD ( 17) MET24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 19) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 12 0 0 0 0 0 ( 21) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 11 0 0 0 0 ( 26) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 0 ( 31) LEU38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 39) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 62) LYS69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 64) SER71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 72) ARG79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 2 0 0 0 0 0 0 (171) SER181 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) LYS183 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ILE185 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) LYS187 0 0 0 0 8 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER191 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) ILE192 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) GLN197 0 0 0 14 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) GLN203 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR205 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) GLU227 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ASP229 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ARG231 0 0 0 0 0 0 0 0 0 27 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) TRP234 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) TYR236 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) THR240 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lnpwavvgfidaegsfMvRvRknskYktgwLvvaifsvTvdkkdlflleslktffgglgsiKkSgnstfsyRiesseqltkiilpffdkysliteklgdyllfkkvlelmgtkehltqrglekivslkasinkglseelqaafpqcvptprpeknipdpfwlagfvsgdgSfKsIlKkseSIkvgfQsilvfQiTqhardvklmeslisylgcgfiEkDsRgpWlYytvTnfsdiqgkiipffhqykiigskygdyqdwckialimqnknhltpeglneiralkggmnkgr >4z2c_AD:Type_II_DNA_topoisomerase; title=QUINOLONE(MOXIFLOXACIN)-DNA CLEAVAGE COMPLEX OF GYRASE FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DA(F5):DT(E15) DT(F6):DA(E14) DA(F7):DT(E13) DC(F8):DG(E12) DA(F9):DT(E11) DA(F10):DT(E10) DC(F11):DG(E9) DG(F12):DC(E8) DT(F13):DA(E7) chainA ( 29) ARG30 0 0 1 0 0 0 0 0 0 (171) ILE172 0 0 0 19 18 0 0 0 0 chainD ( 53) LYS458 3 7 0 0 0 0 0 0 0 prot.sequence qdknlvnvnltkemkasfidyamsvivaRalpdvrdglkpvhrrilygmnelgvtpdkphkksaritgdvmgkyhphgdssiyeamvrmaqwwsyrymlvdghgnfgsmdgdsaaaqrytearmskialemlrdinkntvdfvdnydanereplvlparfpnllvngatgIavgmatnipphnlgetidavklvmdnpevttkdlmevlpgpdfptgalvmgksgihkayetgkgsivlrsrteiettktgrerivvtefpymvnktkvhehivrlvqekriegitavrdesnregvrfvievkrdasanvilnnlfkmtqmqtnfgfnmlaiqngipkilslrqildayiehqkevvvrrtrfdkekaearahilegllialdhideviriirasetdaeaqaelmskfklserqsqaildmrlrrltglerdkiqseyddllaliadladilakpervsqiikdeldevkrkfsdkrrtelmv/mksgleipgkladcssnnpaetelfivegdsaggsaksgrnrefqailpirgKilnvekasmdkilaneeirslftamgtgfgaefdvskaryqklvlmtdadvdgahirtllltliyrymkpileagyvyiaqpplgemddhqlwettmdpehrlmarvsvddaaeadkifdmlmgdrveprrefieenavys >4z2c_BC:Type_II_DNA_topoisomerase; title=QUINOLONE(MOXIFLOXACIN)-DNA CLEAVAGE COMPLEX OF GYRASE FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DG(G9):DC(H11) DT(G10):DA(H10) DT(G11):DA(H9) DG(G12):DC(H8) DT(G13):DA(H7) DA(G14):DT(H6) DT(G15):DA(H5) DG(F1):DC(H4) DA(F2):DT(H3) DT(F3):DA(H2) DC(F4):DG(H1) chainC ( 58) LYS458 0 0 0 0 0 1 1 0 0 0 0 chainB (171) ILE172 0 0 22 17 0 0 0 0 0 0 0 prot.sequence qdknlvnvnltkemkasfidyamsvivaralpdvrdglkpvhrrilygmnelgvtpdkphkksaritgdvmgkyhphgdssiyeamvrmaqwwsyrymlvdghgnfgsmdgdsaaaqrytearmskialemlrdinkntvdfvdnydanereplvlparfpnllvngatgIavgmatnipphnlgetidavklvmdnpevttkdlmevlpgpdfptgalvmgksgihkayetgkgsivlrsrteiettktgrerivvtefpymvnktkvhehivrlvqekriegitavrdesnregvfvievkrdsanvilnnlfkmtmqtnfgfnmlaiqngipkilslrqildayiehqkevvvrrtrfdkekaearahilegllialdhideviriirasetdaeaqaelmskfklserqsqaildmrlrrltglerdkiqseyddllaliadladilakpervsqiikdeldevkrkfsdkrrtelmv/khmksgleisnlpgkladcssnnpaetelfivegdsaggsaksgrnrefqailpirgKilnvekasmdkilaneeirslftamgtgfgaefdvskaryqklvlmtdadvdgahirtllltliyrymkpileagyvyiaqpplgemddhqlwettmdpehrlmarvsvddaaeadkifdmlmgdrveprrefieenavy >4z2c_D:Type_II_DNA_topoisomerase; title=QUINOLONE(MOXIFLOXACIN)-DNA CLEAVAGE COMPLEX OF GYRASE FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DA(E7):DT(F13) DC(E8):DG(F12) DG(E9):DC(F11) DT(E10):DA(F10) DT(E11):DA(F9) DG(E12):DC(F8) DT(E13):DA(F7) DA(E14):DT(F6) DT(E15):DA(F5) chainD ( 53) LYS458 0 0 0 0 0 0 0 7 3 prot.sequence mksgleipgkladcssnnpaetelfivegdsaggsaksgrnrefqailpirgKilnvekasmdkilaneeirslftamgtgfgaefdvskaryqklvlmtdadvdgahirtllltliyrymkpileagyvyiaqpplgemddhqlwettmdpehrlmarvsvddaaeadkifdmlmgdrveprrefieenavys >4z2d_ABCD:Type_II_DNA_topoisomerase; title=QUINOLONE(LEVOFLOXACIN)-DNA CLEAVAGE COMPLEX OF GYRASE FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DG(G9):DC(H11) DT(G10):DA(H10) DT(G11):DA(H9) DG(G12):DC(H8) DT(G13):DA(H7) DA(G14):DT(H6) DT(G15):DA(H5) DG(F1):DC(H4) DA(F2):DT(H3) DT(F3):DA(H2) DC(F4):DG(H1) DA(F5):DT(E15) DT(F6):DA(E14) DA(F7):DT(E13) DC(F8):DG(E12) DA(F9):DT(E11) DA(F10):DT(E10) DC(F11):DG(E9) chainA ( 21) TYR22 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 29) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (171) ILE172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 16 0 0 chainC ( 58) LYS458 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB (171) ILE172 0 0 18 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 53) LYS458 0 0 0 0 0 0 0 0 0 0 0 4 9 1 0 0 0 0 prot.sequence qdknlvnvnltkemkasfidYamsvivaRalpdvrdglkpvhrrilygmnelgvtpdkphkksaritgdvmgkyhphgdssiyeamvrmaqwwsyrymlvdghgnfgsmdgdsaaaqrytearmskialemlrdinkntvdfvdnydanereplvlparfpnllvngatgIavgmatnipphnlgetidavklvmdnpevttkdlmevlpgpdfptgalvmgksgihkayetgkgsivlrsrteiettktgrerivvtefpymvnktkvhehivrlvqekriegitavrdesnregvrfvievkrdasanvilnnlfkmtqmqtnfgfnmlaiqngipkilslrqildayiehqkevvvrrtrfdkekaearahilegllialdhideviriirasetdaeaqaelmskfklserqsqaildmrlrrltglerdkiqseyddllaliadladilakpervsqiikdeldevkrkfsdkrrtelmv/qdknlvnvnltkemkasfidyamsvivaralpdvrdglkpvhrrilygmnelgvtpdkphkksaritgdvmgkyhphgdssiyeamvrmaqwwsyrymlvdghgnfgsmdgdsaaaqrytearmskialemlrdinkntvdfvdnydanereplvlparfpnllvngatgIavgmatnipphnlgetidavklvmdnpevttkdlmevlpgpdfptgalvmgksgihkayetgkgsivlrsrteivvtefpymvnktkvhehivrlvqekriegitavrdesnregvfvirdasanvilnnlfkmtqmqtnfgfnmlaiqngipkilslrqildayiehqkevvvrrtrfdkekaearahilegllialdhideviriirasetdaeaqaelmskfklserqsqaildmrlrrltglerdkiqseyddllaliadladilakpervsqiikdeldevkrkfsdkrrtelmv/khmksgleisnlpgkladcssnnpaetelfivegdsaggsaksgrnrefqailpirgKilnvekasmdkilaneeirslftamgtgfgaefdvskaryqklvlmtdadvdgahirtllltliyrymkpileagyvyiaqpplgemddhqlwettmdpehrlmarvsvddaaeadkifdmlmgdrveprrefieenavy/mksgleipgkladcssnnpaetelfivegdsaggsaksgrnrefqailpirgKilnvekasmdkilaneeirslftamgtgfgaefdvskaryqklvlmtdadvdgahirtllltliyrymkpileagyvyiaqpplgemddhqlwettmdpehrlmarvsvddaaeadkifdmlmgdrveprrefieenavys >4z2d_D:Type_II_DNA_topoisomerase; title=QUINOLONE(LEVOFLOXACIN)-DNA CLEAVAGE COMPLEX OF GYRASE FROM S. PNEUMONIAE organism=? DNA sequence DG(E9):DC(F11) DT(E10):DA(F10) DT(E11):DA(F9) DG(E12):DC(F8) DT(E13):DA(F7) DA(E14):DT(F6) DT(E15):DA(F5) DG(H1):DC(F4) DA(H2):DT(F3) DT(H3):DA(F2) DC(H4):DG(F1) DA(H5):DT(G15) DT(H6):DA(G14) DA(H7):DT(G13) DC(H8):DG(G12) DA(H9):DT(G11) DA(H10):DT(G10) DC(H11):DG(G9) chainD ( 53) LYS458 0 0 0 0 1 9 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mksgleipgkladcssnnpaetelfivegdsaggsaksgrnrefqailpirgKilnvekasmdkilaneeirslftamgtgfgaefdvskaryqklvlmtdadvdgahirtllltliyrymkpileagyvyiaqpplgemddhqlwettmdpehrlmarvsvddaaeadkifdmlmgdrveprrefieenavys >4z2e_AD:Type_II_DNA_topoisomerase; title=QUINOLONE(TROVAFLOXACIN)-DNA CLEAVAGE COMPLEX OF GYRASE FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DA(F5):DT(E15) DT(F6):DA(E14) DA(F7):DT(E13) DC(F8):DG(E12) DA(F9):DT(E11) DA(F10):DT(E10) DC(F11):DG(E9) DG(F12):DC(E8) chainA ( 21) TYR22 0 0 1 0 0 0 0 0 ( 29) ARG30 0 1 2 0 0 0 0 0 (171) ILE172 0 0 0 21 21 0 0 0 chainD ( 53) LYS458 4 6 0 0 0 0 0 0 prot.sequence qdknlvnvnltkemkasfidYamsvivaRalpdvrdglkpvhrrilygmnelgvtpdkphkksaritgdvmgkyhphgdssiyeamvrmaqwwsyrymlvdghgnfgsmdgdsaaaqrytearmskialemlrdinkntvdfvdnydanereplvlparfpnllvngatgIavgmatnipphnlgetidavklvmdnpevttkdlmevlpgpdfptgalvmgksgihkayetgkgsivlrsrteiettktgrerivvtefpymvnktkvhehivrlvqekriegitavrdesnregvrfvievkrdasanvilnnlfkmtqmqtnfgfnmlaiqngipkilslrqildayiehqkevvvrrtrfdkekaearahilegllialdhideviriirasetdaeaqaelmskfklserqsqaildmrlrrltglerdkiqseyddllaliadladilakpervsqiikdeldevkrkfsdkrrtelmv/mksgleipgkladcssnnpaetelfivegdsaggsaksgrnrefqailpirgKilnvekasmdkilaneeirslftamgtgfgaefdvskaryqklvlmtdadvdgahirtllltliyrymkpileagyvyiaqppmddhqlwettmdpehrlmarvsvddaaeadkifdmlmgdrveprrefieenavys >4z2e_BC:Type_II_DNA_topoisomerase; title=QUINOLONE(TROVAFLOXACIN)-DNA CLEAVAGE COMPLEX OF GYRASE FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DG(G9):DC(H11) DT(G10):DA(H10) DT(G11):DA(H9) DG(G12):DC(H8) DT(G13):DA(H7) DA(G14):DT(H6) DT(G15):DA(H5) DG(F1):DC(H4) DA(F2):DT(H3) DT(F3):DA(H2) DC(F4):DG(H1) chainC chainB (171) ILE172 0 0 0 3 0 0 0 0 0 0 0 prot.sequence qdknlvnvnltkemkasfidyamsvivaralpdvrdglkpvhrrilygmnelgvtpdkphkksaritgdvmgkyhphgdssiyeamvrmaqwwsyrymlvdghgnfgsmdgdsaaaqrytearmskialemlrdinkntvdfvdnydanereplvlparfpnllvngatgIavgmatnipphnlgetidavklvmdnpevttkdlmevlpgpdfptgalvmgksgihkayetgkgsivlrsrteivvtefpymvnktkvhehivrlvqekriegitavrdesnregvrfvirdasanvilnnlfkmtqmqtnfgfnmlaiqngipkilslrqildayiehqkevvvrrtrfdkekaearahilegllialdhideviriirasetdaeaqaelmskfklserqsqaildmrlrrltglerdkiqseyddllaliadladilakpervsqiikdeldevkrkfsdkrrtelmv/khmksgleisnlpgkladcssnnpaetelfivegdsaggsaksgrnrefqailpirgkilnvekasmdkilaneeirslftamgtgfgaefdvskaryqklvlmtdadvdgahirtllltliyrymkpileagyvyiaqppgemddhqlwettmdpehrlmarvsvddaaEadkifdmlmgdrveprrefieenavy >4z3a_A:Uracil-DNA_glycosylase-like; title=ACETATE-FREE STRUCTURE OF THE ENZYME-PRODUCT COMPLEX RESULTING FROM TDG ACTION ON A GU MISMATCH organism=Homo sapiens DNA sequence DC(C1):DG(D28) DA(C2):DT(D27) DG(C3):DC(D26) DC(C4):DG(D25) DT(C5):DA(D24) DC(C6):DG(D23) DT(C7):DA(D22) DG(C8):DC(D21) DT(C9):DA(D20) DA(C10):DT(D19) DC(C11):DG(D18) DG(C12):ORP(D17) DT(C13):DA(D16) DG(C14):DC(D15) DA(C15):DT(D14) DG(C16):DC(D13) DC(C17):DG(D12) DG(C18):DC(D11) DA(C19):DT(D10) DT(C20):DA(D9) DG(C21):DC(D8) DG(C22):DC(D7) DA(C23):DT(D6) DC(C24):DG(D5) DA(C25):DT(D4) DG(C26):DC(D3) DC(C27):DG(D2) DT(C28):DA(D1) chainA ( 3) HIS107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 2 0 0 0 0 0 0 0 0 0 0 0 ( 35) ILE139 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN140 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ASN157 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) THR197 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) SER200 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) LYS201 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) SER273 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ALA274 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG275 0 0 0 0 0 0 0 0 0 0 22 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) CYS276 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ALA277 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) GLN278 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) PRO280 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gsHmasfngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnHfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARCAQfPraqdkvhyyiklkdlrdqlkg >4z3c_C: title=ZINC FINGER REGION OF HUMAN TET3 IN COMPLEX WITH CPG DNA organism=HOMO SAPIENS DNA sequence DG(B1):DC(A12) DC(B2):DG(A11) DC(B3):DG(A10) DA(B4):DT(A9) DA(B5):DT(A8) DC(B6):DG(A7) DG(B7):DC(A6) DT(B8):DA(A5) DT(B9):DA(A4) DG(B10):DC(A3) DG(B11):DC(A2) DC(B12):DG(A1) chainC ( 2) LYS53 0 0 0 0 0 0 10 5 7 0 0 0 ( 29) THR80 0 0 0 0 1 0 0 0 0 0 0 0 ( 30) HIS81 0 0 0 0 0 15 12 13 0 0 0 0 ( 31) GLN82 0 0 0 0 3 5 7 0 0 0 0 0 prot.sequence KrkrcgtcepcrrlencgactsctnrrTHQicklrkcevlkkkv >4z3o_AB:Type_II_DNA_topoisomerase; title=QUINOLONE(MOXIFLOXACIN)-DNA CLEAVAGE COMPLEX OF TOPOISOMERASE IV FROM S. PNEUMONIAE organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DC(G9):DG(H11) DG(G10):DC(H10) DT(G11):DA(H9) DG(G12):DC(H8) DC(G13):DG(H7) DA(G14):DT(H6) DT(G15):DA(H5) DA(F1):DT(H4) DG(F2):DC(H3) DT(F3):DA(H2) DC(F4):DG(H1) DA(F5):DT(E15) DT(F6):DA(E14) DT(F7):DA(E13) DC(F8):DG(E12) DA(F9):DT(E11) DT(F10):DA(E10) DG(F11):DC(E9) chainA ( 44) LYS458 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 (233) ARG1028 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) SER1080 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (322) ARG1117 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (375) ILE1170 0 0 17 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 44) LYS458 0 0 0 0 0 0 0 0 0 0 0 2 8 4 0 0 0 0 (225) TYR1020 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (233) ARG1028 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (285) SER1080 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (322) ARG1117 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (375) ILE1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 16 0 0 prot.sequence kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykyawtdgeleelrklqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkftniqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled/kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmayawtdgeleelrkqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkftiqnmsledimgerfgrYskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled >4z3o_B:Type_II_DNA_topoisomerase; title=QUINOLONE(MOXIFLOXACIN)-DNA CLEAVAGE COMPLEX OF TOPOISOMERASE IV FROM S. PNEUMONIAE organism=? DNA sequence DC(G9):DG(H11) DG(G10):DC(H10) DT(G11):DA(H9) DG(G12):DC(H8) DC(G13):DG(H7) DA(G14):DT(H6) DT(G15):DA(H5) DA(F1):DT(H4) DG(F2):DC(H3) DT(F3):DA(H2) DC(F4):DG(H1) DA(F5):DT(E15) DT(F6):DA(E14) DT(F7):DA(E13) DC(F8):DG(E12) DA(F9):DT(E11) DT(F10):DA(E10) DG(F11):DC(E9) chainB ( 44) LYS458 0 0 0 0 0 0 0 0 0 0 0 2 8 4 0 0 0 0 (225) TYR1020 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (233) ARG1028 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (285) SER1080 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (322) ARG1117 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (375) ILE1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 16 0 0 prot.sequence kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmayawtdgeleelrkqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkftiqnmsledimgerfgrYskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled >4z47_A:Uracil-DNA_glycosylase-like; title=STRUCTURE OF THE ENZYME-PRODUCT COMPLEX RESULTING FROM TDG ACTION ON A GU MISMATCH IN THE PRESENCE OF EXCESS BASE organism=Homo sapiens DNA sequence DA(D1):DT(C28) DG(D2):DC(C27) DC(D3):DG(C26) DT(D4):DA(C25) DG(D5):DC(C24) DT(D6):DA(C23) DC(D7):DG(C22) DC(D8):DG(C21) DA(D9):DT(C20) DT(D10):DA(C19) DC(D11):DG(C18) DG(D12):DC(C17) DC(D13):DG(C16) DT(D14):DA(C15) DC(D15):DG(C14) DA(D16):DT(C13) ORP(D17):DG(C12) DG(D18):DC(C11) DT(D19):DA(C10) DA(D20):DT(C9) DC(D21):DG(C8) DA(D22):DT(C7) DG(D23):DC(C6) DA(D24):DT(C5) DG(D25):DC(C4) DC(D26):DG(C3) DT(D27):DA(C2) DG(D28):DC(C1) chainA ( 29) ILE139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 87) THR197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 90) SER200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 91) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 (163) SER273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (164) ALA274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 (165) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 11 0 0 0 0 0 0 0 0 0 0 (166) CYS276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (167) ALA277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 (168) GLN278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 (170) PRO280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnHfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgsKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARCAQfPraqdkvhyyiklkdlrdqlkgiernm >4z4q_B:Type_II_DNA_topoisomerase; title=QUINAZOLINEDIONE(PD 0305970)-DNA CLEAVAGE COMPLEX OF TOPOISOMERASE IV FROM S. PNEUMONIAE organism=? DNA sequence DA(H5):DT(G15) DT(H6):DA(G14) DC(H7):DG(G13) DC(H8):DG(G12) DA(H9):DT(G11) DC(H10):DG(G10) DA(H11):DT(G9) chainB ( 44) LYS458 2 6 4 0 0 0 0 (244) TYR1020 0 0 1 0 0 0 0 (304) SER1080 0 2 0 0 0 0 0 (394) ILE1170 0 0 0 14 17 0 0 prot.sequence kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmskgkgkkeevayawtdgeleelrkqfgkgatlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkftniqnmsledimgerfgrYskyiiqdralpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled >4z53_B:Type_II_DNA_topoisomerase; title=QUINOLONE(TROVAFLOXACIN)-DNA CLEAVAGE COMPLEX OF TOPOISOMERASE IV FROM S. PNEUMONIAE organism=? DNA sequence DG(H1):DC(F4) DA(H2):DT(F3) DC(H3):DG(F2) DT(H4):DA(F1) DA(H5):DT(G15) DT(H6):DA(G14) DG(H7):DC(G13) DC(H8):DG(G12) DA(H9):DT(G11) DC(H10):DG(G10) DG(H11):DC(G9) chainB ( 44) LYS458 0 0 0 0 2 3 0 0 0 0 0 (239) ARG1028 0 0 0 0 0 0 1 0 0 0 0 (291) SER1080 0 0 0 0 1 2 0 0 0 0 0 (328) ARG1117 2 0 0 0 0 0 0 0 0 0 0 (381) ILE1170 0 0 0 0 0 0 0 16 16 0 0 prot.sequence kltpaqsknpaknelylvegdsaggsakqgrdrkfqailplrgKvintakakmadilkneeintmiytigagvgadfsiedanydkiiimtdadtdgahiqtllltffyrymrplveaghvyialpplykmayawtdgeleelrkqlqrykglgemnadqlwettmnpetrtlirvtiedlaraerrvnvlmgdkveprrkwiednvkftleeniqnmsledimgerfgryskyiiqdRalpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdsSiydamvrmsqnwknreilvemhgnngsmdgdppaamRytearlseiagyllqdiekktvpfawnfddtekeptvlpaafpnllvngstgIsagyatdipphnlaevidaavymidhptakidklmeflpgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlvkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfnmvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynlmkkelrevkkkfatprlssled >4z58_A:lambda_repressor-like_DNA-binding_domains; title=HIPB-O3 20MER COMPLEX organism=Escherichia coli DNA sequence DT(B1) DT(B2) DA(B3) DT(B4) DC(B5) DC(B6) DG(B7) DC(B8) DT(B9) DC(B10) DT(B11) DA(B12) DC(B13) DG(B14) DG(B15) DG(B16) DA(B17) DT(B18) DA(B19) DA(B20) chainA ( 26) SER29 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 11 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ASN44 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSNfennpdnttlttffkilqslelsmtlcdak >4z59_A:lambda_repressor-like_DNA-binding_domains; title=HIPB-O4 20MER COMPLEX organism=Escherichia coli DNA sequence DT(B1) DT(B2) DA(B3) DT(B4) DC(B5) DC(B6) DG(B7) DC(B8) DG(B9) DA(B10) DT(B11) DC(B12) DG(B13) DC(B14) DG(B15) DG(B16) DA(B17) DT(B18) DA(B19) DA(B20) chainA ( 26) SER29 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 11 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ASN44 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSNfennpdnttlttffkilqslelsmtlcdak >4z5c_AB:lambda_repressor-like_DNA-binding_domains; title=HIPB-O3 21MER COMPLEX organism=Escherichia coli DNA sequence DT(D23):DA(C21) DT(D24):DA(C20) DA(D25):DT(C19) DT(D26):DA(C18) DC(D27):DG(C17) DC(D28):DG(C16) DG(D29):DC(C15) DC(D30):DG(C14) DT(D31):DA(C13) DC(D32):DG(C12) DT(D33):DA(C11) DA(D34):DT(C10) DC(D35):DG(C9) DG(D36):DC(C8) DG(D37):DC(C7) DG(D38):DC(C6) DA(D39):DT(C5) DT(D40):DA(C4) DA(D41):DT(C3) chainA ( 26) SER29 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 0 10 11 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) SER29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 9 0 0 0 ( 36) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 ( 37) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 prot.sequence fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak/fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak >4z5c_B:lambda_repressor-like_DNA-binding_domains; title=HIPB-O3 21MER COMPLEX organism=Escherichia coli DNA sequence DT(C3):DA(D41) DA(C4):DT(D40) DT(C5):DA(D39) DC(C6):DG(D38) DC(C7):DG(D37) DC(C8):DG(D36) DG(C9):DC(D35) DT(C10):DA(D34) DA(C11):DT(D33) DG(C12):DC(D32) DA(C13):DT(D31) DG(C14):DC(D30) DC(C15):DG(D29) DG(C16):DC(D28) DG(C17):DC(D27) DA(C18):DT(D26) DT(C19):DA(D25) DA(C20):DT(D24) DA(C21):DT(D23) chainB ( 26) SER29 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 9 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak >4z5d_A:lambda_repressor-like_DNA-binding_domains; title=HIPB-O4 21MER COMPLEX organism=Escherichia coli DNA sequence DT(D23):DA(C21) DT(D24):DA(C20) DA(D25):DT(C19) DT(D26):DA(C18) DC(D27):DG(C17) DC(D28):DG(C16) DG(D29):DC(C15) DC(D30):DG(C14) DG(D31):DC(C13) DA(D32):DT(C12) DT(D33):DA(C11) DC(D34):DG(C10) DG(D35):DC(C9) DC(D36):DG(C8) DG(D37):DC(C7) DG(D38):DC(C6) DA(D39):DT(C5) DT(D40):DA(C4) DA(D41):DT(C3) chainA ( 26) SER29 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 0 8 10 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak >4z5d_AB:lambda_repressor-like_DNA-binding_domains; title=HIPB-O4 21MER COMPLEX organism=Escherichia coli DNA sequence DT(C3):DA(D41) DA(C4):DT(D40) DT(C5):DA(D39) DC(C6):DG(D38) DC(C7):DG(D37) DG(C8):DC(D36) DC(C9):DG(D35) DG(C10):DC(D34) DA(C11):DT(D33) DT(C12):DA(D32) DC(C13):DG(D31) DG(C14):DC(D30) DC(C15):DG(D29) DG(C16):DC(D28) DG(C17):DC(D27) DA(C18):DT(D26) DT(C19):DA(D25) DA(C20):DT(D24) DA(C21):DT(D23) chainA ( 26) SER29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 8 10 8 0 0 0 0 ( 36) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 ( 37) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 chainB ( 26) SER29 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 9 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak/fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak >4z5h_A:lambda_repressor-like_DNA-binding_domains; title=HIPB(S29A)-O2 20MER COMPLEX organism=Escherichia coli DNA sequence DT(B1) DT(B2) DA(B3) DT(B4) DC(B5) DC(B6) DT(B7) DC(B8) DA(B9) DC(B10) DT(B11) DA(B12) DA(B13) DA(B14) DG(B15) DG(B16) DA(B17) DT(B18) DA(B19) DA(B20) chainA ( 27) ALA29 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN39 0 10 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ALA40 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER43 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sfqkiysptqlanamklvrqqngwtqAelakkigikQAtiSnfennpdnttlttffkilqslelsmtlcdak >4z5t_A:Histone-fold; title=THE NUCLEOSOME CONTAINING HUMAN H3.5 organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfntdlrfqsaavgalqeaseaylvglledtnlcaihakrvtimpkdiqlarrirger >4z5t_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE NUCLEOSOME CONTAINING HUMAN H3.5 organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR40 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfntdlrfqsaavgalqeaseaylvglledtnlcaihakrvtimpkdiqlarrirger/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/hRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfntdlrfqsaavgalqeaseaylvglledtnlcaihakrvtimpkdiqlarrirger/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >4z66_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME DISASSEMBLY BY RSC AND SWI/SNF IS ENHANCED BY H3 ACETYLATION NEAR THE NUCLEOSOME DYAD AXIS organism=XENOPUS LAEVIS DNA sequence DA(J148):DT(I147) DT(J149):DA(I146) DC(J150):DG(I145) DA(J151):DT(I144) DA(J152):DT(I143) DT(J153):DA(I142) DA(J154):DT(I141) DT(J155):DA(I140) DC(J156):DG(I139) DC(J157):DG(I138) DA(J158):DT(I137) DC(J159):DG(I136) DC(J160):DG(I135) DT(J161):DA(I134) DG(J162):DC(I133) DC(J163):DG(I132) DA(J164):DT(I131) DG(J165):DC(I130) DA(J166):DT(I129) DT(J167):DA(I128) DA(J168):DT(I127) DC(J169):DG(I126) DT(J170):DA(I125) DA(J171):DT(I124) DC(J172):DG(I123) DC(J173):DG(I122) DA(J174):DT(I121) DA(J175):DT(I120) DA(J176):DT(I119) DA(J177):DT(I118) DG(J178):DC(I117) DT(J179):DA(I116) DG(J180):DC(I115) DT(J181):DA(I114) DA(J182):DT(I113) DT(J183):DA(I112) DT(J184):DA(I111) DT(J185):DA(I110) DG(J186):DC(I109) DG(J187):DC(I108) DA(J188):DT(I107) DA(J189):DT(I106) DA(J190):DT(I105) DC(J191):DG(I104) DT(J192):DA(I103) DG(J193):DC(I102) DC(J194):DG(I101) DT(J195):DA(I100) DC(J196):DG(I99) DC(J197):DG(I98) DA(J198):DT(I97) DT(J199):DA(I96) DC(J200):DG(I95) DA(J201):DT(I94) DA(J202):DT(I93) DA(J203):DT(I92) DA(J204):DT(I91) DG(J205):DC(I90) DG(J206):DC(I89) DC(J207):DG(I88) DA(J208):DT(I87) DT(J209):DA(I86) DG(J210):DC(I85) DT(J211):DA(I84) DT(J212):DA(I83) DC(J213):DG(I82) DA(J214):DT(I81) DG(J215):DC(I80) DC(J216):DG(I79) DT(J217):DA(I78) DG(J218):DC(I77) DG(J219):DC(I76) DA(J220):DT(I75) DT(J221):DA(I74) DT(J222):DA(I73) DC(J223):DG(I72) DC(J224):DG(I71) DA(J225):DT(I70) DG(J226):DC(I69) DC(J227):DG(I68) DT(J228):DA(I67) DG(J229):DC(I66) DA(J230):DT(I65) DA(J231):DT(I64) DC(J232):DG(I63) DA(J233):DT(I62) DT(J234):DA(I61) DG(J235):DC(I60) DC(J236):DG(I59) DC(J237):DG(I58) DT(J238):DA(I57) DT(J239):DA(I56) DT(J240):DA(I55) DT(J241):DA(I54) DG(J242):DC(I53) DA(J243):DT(I52) DT(J244):DA(I51) DG(J245):DC(I50) DG(J246):DC(I49) DA(J247):DT(I48) DG(J248):DC(I47) DC(J249):DG(I46) DA(J250):DT(I45) DG(J251):DC(I44) DT(J252):DA(I43) DT(J253):DA(I42) DT(J254):DA(I41) DC(J255):DG(I40) DC(J256):DG(I39) DA(J257):DT(I38) DA(J258):DT(I37) DA(J259):DT(I36) DT(J260):DA(I35) DA(J261):DT(I34) DC(J262):DG(I33) DA(J263):DT(I32) DC(J264):DG(I31) DT(J265):DA(I30) DT(J266):DA(I29) DT(J267):DA(I28) DT(J268):DA(I27) DG(J269):DC(I26) DG(J270):DC(I25) DT(J271):DA(I24) DA(J272):DT(I23) DG(J273):DC(I22) DT(J274):DA(I21) DA(J275):DT(I20) DT(J276):DA(I19) DC(J277):DG(I18) DT(J278):DA(I17) DG(J279):DC(I16) DC(J280):DG(I15) DA(J281):DT(I14) DG(J282):DC(I13) DG(J283):DC(I12) DT(J284):DA(I11) DG(J285):DC(I10) DG(J286):DC(I9) DA(J287):DT(I8) DT(J288):DA(I7) DA(J289):DT(I6) DT(J290):DA(I5) DT(J291):DA(I4) DG(J292):DC(I3) DA(J293):DT(I2) DT(J294):DA(I1) chainA ( 3) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR441 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 9) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG1230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 3) ARG640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 2) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpdiqlarrirgera/dniqgitkPairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >4z66_C:Histone-fold; title=NUCLEOSOME DISASSEMBLY BY RSC AND SWI/SNF IS ENHANCED BY H3 ACETYLATION NEAR THE NUCLEOSOME DYAD AXIS organism=XENOPUS LAEVIS DNA sequence DA(J148):DT(I147) DT(J149):DA(I146) DC(J150):DG(I145) DA(J151):DT(I144) DA(J152):DT(I143) DT(J153):DA(I142) DA(J154):DT(I141) DT(J155):DA(I140) DC(J156):DG(I139) DC(J157):DG(I138) DA(J158):DT(I137) DC(J159):DG(I136) DC(J160):DG(I135) DT(J161):DA(I134) DG(J162):DC(I133) DC(J163):DG(I132) DA(J164):DT(I131) DG(J165):DC(I130) DA(J166):DT(I129) DT(J167):DA(I128) DA(J168):DT(I127) DC(J169):DG(I126) DT(J170):DA(I125) DA(J171):DT(I124) DC(J172):DG(I123) DC(J173):DG(I122) DA(J174):DT(I121) DA(J175):DT(I120) DA(J176):DT(I119) DA(J177):DT(I118) DG(J178):DC(I117) DT(J179):DA(I116) DG(J180):DC(I115) DT(J181):DA(I114) DA(J182):DT(I113) DT(J183):DA(I112) DT(J184):DA(I111) DT(J185):DA(I110) DG(J186):DC(I109) DG(J187):DC(I108) DA(J188):DT(I107) DA(J189):DT(I106) DA(J190):DT(I105) DC(J191):DG(I104) DT(J192):DA(I103) DG(J193):DC(I102) DC(J194):DG(I101) DT(J195):DA(I100) DC(J196):DG(I99) DC(J197):DG(I98) DA(J198):DT(I97) DT(J199):DA(I96) DC(J200):DG(I95) DA(J201):DT(I94) DA(J202):DT(I93) DA(J203):DT(I92) DA(J204):DT(I91) DG(J205):DC(I90) DG(J206):DC(I89) DC(J207):DG(I88) DA(J208):DT(I87) DT(J209):DA(I86) DG(J210):DC(I85) DT(J211):DA(I84) DT(J212):DA(I83) DC(J213):DG(I82) DA(J214):DT(I81) DG(J215):DC(I80) DC(J216):DG(I79) DT(J217):DA(I78) DG(J218):DC(I77) DG(J219):DC(I76) DA(J220):DT(I75) DT(J221):DA(I74) DT(J222):DA(I73) DC(J223):DG(I72) DC(J224):DG(I71) DA(J225):DT(I70) DG(J226):DC(I69) DC(J227):DG(I68) DT(J228):DA(I67) DG(J229):DC(I66) DA(J230):DT(I65) DA(J231):DT(I64) DC(J232):DG(I63) DA(J233):DT(I62) DT(J234):DA(I61) DG(J235):DC(I60) DC(J236):DG(I59) DC(J237):DG(I58) DT(J238):DA(I57) DT(J239):DA(I56) DT(J240):DA(I55) DT(J241):DA(I54) DG(J242):DC(I53) DA(J243):DT(I52) DT(J244):DA(I51) DG(J245):DC(I50) DG(J246):DC(I49) DA(J247):DT(I48) DG(J248):DC(I47) DC(J249):DG(I46) DA(J250):DT(I45) DG(J251):DC(I44) DT(J252):DA(I43) DT(J253):DA(I42) DT(J254):DA(I41) DC(J255):DG(I40) DC(J256):DG(I39) DA(J257):DT(I38) DA(J258):DT(I37) DA(J259):DT(I36) DT(J260):DA(I35) DA(J261):DT(I34) DC(J262):DG(I33) DA(J263):DT(I32) DC(J264):DG(I31) DT(J265):DA(I30) DT(J266):DA(I29) DT(J267):DA(I28) DT(J268):DA(I27) DG(J269):DC(I26) DG(J270):DC(I25) DT(J271):DA(I24) DA(J272):DT(I23) DG(J273):DC(I22) DT(J274):DA(I21) DA(J275):DT(I20) DT(J276):DA(I19) DC(J277):DG(I18) DT(J278):DA(I17) DG(J279):DC(I16) DC(J280):DG(I15) DA(J281):DT(I14) DG(J282):DC(I13) DG(J283):DC(I12) DT(J284):DA(I11) DG(J285):DC(I10) DG(J286):DC(I9) DA(J287):DT(I8) DT(J288):DA(I7) DA(J289):DT(I6) DT(J290):DA(I5) DT(J291):DA(I4) DG(J292):DC(I3) DA(J293):DT(I2) DT(J294):DA(I1) chainC ( 29) ARG842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt >4z6c_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA 279NA MUTANT COMPLEXED WITH G IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE CTP organism=Homo sapiens DNA sequence DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 0 6 0 0 0 0 0 0 0 (261) TYR271 8 0 0 0 0 0 0 0 0 0 (273) ARG283 4 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpsknekeyphrridirlipkdqyycgvlYftgsdifaknmRahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4z6d_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA 279NA MUTANT COMPLEXED WITH G IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE TTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 35 0 0 0 0 ( 29) LYS35 8 0 0 0 0 ( 32) ALA38 4 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifaknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4z6e_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA 279NA MUTANT COMPLEXED WITH G IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE TTP AND MANGANESE organism=Homo sapiens DNA sequence DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 2 6 0 0 0 0 0 0 0 (262) TYR271 8 0 0 0 0 0 0 0 0 0 (274) ARG283 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifaknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4z6f_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA 279NA MUTANT COMPLEXED WITH G IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE TTP AND MANGANESE organism=Homo sapiens DNA sequence DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 0 6 0 0 0 0 0 0 0 (262) TYR271 7 0 0 0 0 0 0 0 0 0 (274) ARG283 4 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifaknmRahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >4z7b_A:Uracil-DNA_glycosylase-like; title=STRUCTURE OF THE ENZYME-PRODUCT COMPLEX RESULTING FROM TDG ACTION ON A GFC MISMATCH organism=Homo sapiens DNA sequence DC(C1):DG(D28) DA(C2):DT(D27) DG(C3):DC(D26) DC(C4):DG(D25) DT(C5):DA(D24) DC(C6):DG(D23) DT(C7):DA(D22) DG(C8):DC(D21) DT(C9):DA(D20) DA(C10):DT(D19) DC(C11):DG(D18) DG(C12):ORP(D17) DT(C13):DA(D16) DG(C14):DC(D15) DA(C15):DT(D14) DG(C16):DC(D13) DC(C17):DG(D12) DG(C18):DC(D11) DA(C19):DT(D10) DT(C20):DA(D9) DG(C21):DC(D8) DG(C22):DC(D7) DA(C23):DT(D6) DC(C24):DG(D5) DA(C25):DT(D4) DG(C26):DC(D3) DC(C27):DG(D2) DT(C28):DA(D1) chainA ( 29) ILE139 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN140 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN157 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) THR197 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) SER200 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) LYS201 0 0 0 0 0 0 0 0 3 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) SER273 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ALA274 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ARG275 0 0 0 0 0 0 0 0 0 0 22 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) CYS276 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ALA277 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) GLN278 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) PRO280 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnHfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARCAQfPraqdkvhyyiklkdlrdqlkgie >4z7z_A:Uracil-DNA_glycosylase-like; title=STRUCTURE OF THE ENZYME-PRODUCT COMPLEX RESULTING FROM TDG ACTION ON A GT MISMATCH IN THE PRESENCE OF EXCESS BASE organism=Homo sapiens DNA sequence DC(C1):DG(D28) DA(C2):DT(D27) DG(C3):DC(D26) DC(C4):DG(D25) DT(C5):DA(D24) DC(C6):DG(D23) DT(C7):DA(D22) DG(C8):DC(D21) DT(C9):DA(D20) DA(C10):DT(D19) DC(C11):DG(D18) DG(C12):ORP(D17) DT(C13):DA(D16) DG(C14):DC(D15) DA(C15):DT(D14) DG(C16):DC(D13) DC(C17):DG(D12) DG(C18):DC(D11) DA(C19):DT(D10) DT(C20):DA(D9) DG(C21):DC(D8) DG(C22):DC(D7) DA(C23):DT(D6) DC(C24):DG(D5) DA(C25):DT(D4) DG(C26):DC(D3) DC(C27):DG(D2) DT(C28):DA(D1) chainA ( 29) ILE139 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN140 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN157 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) THR197 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) SER200 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) SER273 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ALA274 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ARG275 0 0 0 0 0 0 0 0 0 0 22 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) CYS276 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ALA277 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) GLN278 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) PRO280 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnHfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgskdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARCAQfPraqdkvhyyiklkdlrdqlkgiern >4zcf_ABC:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURAL BASIS OF ASYMMETRIC DNA METHYLATION AND ATP-TRIGGERED LONG- RANGE DIFFUSION BY ECOP15I organism=ESCHERICHIA COLI DNA sequence DT(D2):DA(E20) DA(D3):DT(E19) DC(D4):DG(E18) DA(D5):DT(E17) DG(D6):DC(E16) DC(D7):DG(E15) DA(D8):DT(E14) DG(D9):DC(E13) DT(D10):DA(E12) DA(D11):DT(E11) DG(D12):DC(E10) DA(D13):DT(E9) DC(D14):DG(E8) DT(D15):DA(E7) DA(D16):DT(E6) DT(D17):DA(E5) DG(D18):DC(E4) DA(D19):DT(E3) DT(D20):DA(E2) chainA (288) ARG305 0 6 14 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) SER318 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) GLN319 0 9 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) SER320 0 0 0 0 4 16 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) HIS322 0 0 0 20 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN323 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (307) PRO324 0 0 0 0 0 6 6 11 0 0 0 0 0 0 0 0 0 0 0 (312) TYR329 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (333) ARG350 0 0 0 0 0 28 7 2 0 0 0 0 0 0 0 0 0 0 0 chainB (120) ASP123 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 (123) TYR126 0 0 0 0 0 0 45 0 0 0 0 0 0 0 0 0 0 0 0 (125) THR128 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (127) LYS130 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (128) ASP131 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (227) THR230 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) ASP231 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (229) ASN232 0 0 0 0 4 22 2 0 0 0 0 0 0 0 0 0 0 0 0 (230) ASN233 0 0 0 0 0 0 15 11 4 0 0 0 0 0 0 0 0 0 0 (239) GLU242 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG397 0 0 13 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ASN416 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 (413) LYS418 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 chainC prot.sequence anskqlavlkanfpqcfdkngafiqeklleiirasekesyslnwlgksyarllanlppktllaedkthnqqeenknsqhllikgdnlevlkhmvnayaekvkmiyidppyntgkdgfvynddrftpeqlselagidldeakrilefttkgssshsawltfiyprlyiarelmredgtifisidhnefsqlklvcdeifgeqnhvgdlvwknatdnnpsniaveheyiivytknkeqlisewksnisdvknllvnigeefaskytgnelqekytqwfrehrselwpldRykyidkdgiytgSQSvHNPgkegYrydiihpktkkpckqplmgyRfpldtmdrllseekiifgddenkiielkvyakdykqklssvihldgrvatnelkelfpmtqpfnaktiklvedlisfacdgegivldffagsgttahtvfnlnnknktsyqfitvqldeptkksdamkhgyntifdltkerliraskknrdqgfkvyqlmpdfrakdeseltffddvvltpeqydtllttwclydgsllttpiedvdlggykahlcdgrlyliapnftsealkallqkvdsdkdfapnkvvfygsnfsakqmelnealksyansieldlvvrn/kketifevetanskqlavlkanfpqcfdngafiqeklleiirasevelskesyslnwlgksyarllanlppktllaedkthnqqeenknsqhllikgdnlevlkhmvnayaekvkmiyiDppYnTgKDgfvynddrkftpeqlselagidldeakrilefttkgssshsawltfiyprlyiarelmredgtifisidhnefsqlklvcdeifgeqnhvgdlvwknaTDNNpsniavehEyiivytkkeqlisewksnisdvknllvnigeefaskytgnelqekytqwfrehrselwpldrykyidkdgiytgsqsvhnpgkegyrydiihpktkkpckqplmgyrfpldtmdrllseekiifgddekiielkvyakdykqklssvihldgRvatnelkelfpemtqpftNaKtiklvedlisfacdgegivldffagsgttahtvfnlnnknktsyqfitvqldeptkdksdamkhgyntifdltkerliraskknrdqgfkvyqlmpdfvvltpeqydtllttwclydgsllttpiedvdlggykahlcdgrlyliapnftalkallqkdkdfapnkvvfygsnsakqmelnealksyankkeldlvvrn/tleknlphqkagvdavmnvfvsatphltdnvavrllanpelklseqqyynniknvqafngiahskdnhnaksniidvsmetgtgktytyiktifdlnksfginkfiiivptlsikagtvNflKsDaLKehfrddykrelrtyvvesqkmpqaihdfveasnfkkyihvlvinsgminsksltdtydtglldnqfntpvdalravkpfiiidephrfptgkktweniEKFNaqyiirygAtfsegyknlvyrltavdafnddlvkgidayiednanlkfvkdgkeatffklakslskthsaihdltldalntavlsngielkigssinpysydqtladnmmrkavkehfklekelltqprikpltlffiddlktkfeeyvlaeanellyknyLektvtnissvhggyieqeInEilhdkelllsldnprrfifskwtlregwdnpnvfqicklrssklqevgrglrlpvneymcrvknftlkyyvdftekdfvdslvkevnesspskftqelkeqidnfkdsdaysrlkselkelwdlinqkavieykinseseflsifksfmleetersyrefldnlsqtifvkhgtlhkvfcdikdtilniqtirkiksgfskyllnnsfslgynl >4zcf_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURAL BASIS OF ASYMMETRIC DNA METHYLATION AND ATP-TRIGGERED LONG- RANGE DIFFUSION BY ECOP15I organism=ESCHERICHIA COLI DNA sequence DT(D2):DA(E20) DA(D3):DT(E19) DC(D4):DG(E18) DA(D5):DT(E17) DG(D6):DC(E16) DC(D7):DG(E15) DA(D8):DT(E14) DG(D9):DC(E13) DT(D10):DA(E12) DA(D11):DT(E11) DG(D12):DC(E10) DA(D13):DT(E9) DC(D14):DG(E8) DT(D15):DA(E7) DA(D16):DT(E6) DT(D17):DA(E5) DG(D18):DC(E4) DA(D19):DT(E3) DT(D20):DA(E2) chainB (120) ASP123 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 (123) TYR126 0 0 0 0 0 0 45 0 0 0 0 0 0 0 0 0 0 0 0 (125) THR128 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (127) LYS130 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (128) ASP131 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (227) THR230 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) ASP231 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (229) ASN232 0 0 0 0 4 22 2 0 0 0 0 0 0 0 0 0 0 0 0 (230) ASN233 0 0 0 0 0 0 15 11 4 0 0 0 0 0 0 0 0 0 0 (239) GLU242 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG397 0 0 13 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ASN416 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 (413) LYS418 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kketifevetanskqlavlkanfpqcfdngafiqeklleiirasevelskesyslnwlgksyarllanlppktllaedkthnqqeenknsqhllikgdnlevlkhmvnayaekvkmiyiDppYnTgKDgfvynddrkftpeqlselagidldeakrilefttkgssshsawltfiyprlyiarelmredgtifisidhnefsqlklvcdeifgeqnhvgdlvwknaTDNNpsniavehEyiivytkkeqlisewksnisdvknllvnigeefaskytgnelqekytqwfrehrselwpldrykyidkdgiytgsqsvhnpgkegyrydiihpktkkpckqplmgyrfpldtmdrllseekiifgddekiielkvyakdykqklssvihlDgRvatnelkelfpemtqpftNaKtiklvedlisfacdgegivldffagsgttahtvfnlnnknktsyqfitvqldeptkdksdamkhgyntifdltkerliraskknrdqgfkvyqlmpdfvvltpeqydtllttwclydgsllttpiedvdlggykahlcdgrlyliapnftalkallqkdkdfapnkvvfygsnsakqmelnealksyankkeldlvvrn >4zm0_A:YefM-like; title=ANTITOXIN PHD FROM PHAGE P1 IN COMPLEX WITH ITS OPERATOR DNA INVERTED REPEAT organism=Enterobacteria phage P1 DNA sequence DC(G2):DG(H14) DT(G3):DA(H13) DT(G4):DA(H12) DG(G5):DC(H11) DT(G6):DA(H10) DG(G7):DC(H9) DT(G8):DA(H8) DA(G9):DT(H7) DC(G10):DG(H6) DA(G11):DT(H5) DC(G12):DG(H4) DA(G13):DT(H3) DT(G14):DA(H2) chainA ( 6) PHE6 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 7) ARG7 0 0 0 0 0 0 0 0 0 8 18 15 0 ( 10) ARG10 0 0 0 0 0 0 0 9 13 18 0 0 0 ( 31) ARG31 0 0 0 0 0 0 0 0 0 0 0 7 10 prot.sequence mqsinFRtaRgnlsevlnnveageeveitrRgrepavivskatfeaykkaaldae >4zm0_BC:YefM-like; title=ANTITOXIN PHD FROM PHAGE P1 IN COMPLEX WITH ITS OPERATOR DNA INVERTED REPEAT organism=Enterobacteria phage P1 DNA sequence DA(H2):DT(G14) DT(H3):DA(G13) DG(H4):DC(G12) DT(H5):DA(G11) DG(H6):DC(G10) DT(H7):DA(G9) DA(H8):DT(G8) DC(H9):DG(G7) DA(H10):DT(G6) DC(H11):DG(G5) DA(H12):DT(G4) DA(H13):DT(G3) DG(H14):DC(G2) DC(F1):DG(G1) DA(F2):DT(E14) DT(F3):DA(E13) DG(F4):DC(E12) DT(F5):DA(E11) DG(F6):DC(E10) DT(F7):DA(E9) DA(F8):DT(E8) DC(F9):DG(E7) DA(F10):DT(E6) DC(F11):DG(E5) DA(F12):DT(E4) DA(F13):DT(E3) chainB ( 6) PHE6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG7 0 0 0 0 0 0 0 0 4 17 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 11 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG31 0 0 0 0 0 0 0 0 0 0 5 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 6) PHE6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 7) ARG7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 17 6 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 10 0 0 0 0 0 0 ( 31) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 4 0 0 0 0 0 0 0 0 0 0 prot.sequence mqsinFRtaRgnlsevlnnveageeveitrRgrepavivskatfeaykkaaldaefa/mqsinFRtaRgnlsevlnnveageeveitrRgrepavivskatfeaykkaaldae >4zm2_AB:YefM-like; title=ANTITOXIN PHD FROM PHAGE P1 IN COMPLEX WITH ITS OPERATOR DNA INVERTED REPEAT IN A MONOCLINIC SPACE GROUP organism=Enterobacteria phage P1 DNA sequence DT(G3):DA(H13) DT(G4):DA(H12) DG(G5):DC(H11) DT(G6):DA(H10) DG(G7):DC(H9) DA(G9):DT(H7) DC(G10):DG(H6) DA(G11):DT(H5) DC(G12):DG(H4) DA(G13):DT(H3) DT(G14):DA(H2) chainA ( 6) PHE6 0 0 0 0 0 0 0 4 0 0 0 ( 7) ARG7 0 0 0 0 0 0 0 0 1 0 0 ( 10) ARG10 0 0 0 0 0 2 14 14 0 0 0 ( 31) ARG31 0 0 0 0 0 0 0 0 0 0 1 chainB ( 7) ARG7 0 16 16 2 0 0 0 0 0 0 0 ( 31) ARG31 2 5 0 0 0 0 0 0 0 0 0 prot.sequence mqsinFRtaRgnlsevlnnveageeveitrRgrepavivskatfeaykkaal/mqsinfRtargnlsevlnnveageeveitrRgrepavivskatfeaykkaaldaefaslfd >4zm2_C:YefM-like; title=ANTITOXIN PHD FROM PHAGE P1 IN COMPLEX WITH ITS OPERATOR DNA INVERTED REPEAT IN A MONOCLINIC SPACE GROUP organism=Enterobacteria phage P1 DNA sequence DC(E2):DG(F14) DT(E3):DA(F13) DT(E4):DA(F12) DG(E5):DC(F11) DT(E6):DA(F10) DG(E7):DC(F9) DT(E8):DA(F8) DA(E9):DT(F7) DC(E10):DG(F6) DA(E11):DT(F5) DC(E12):DG(F4) DA(E13):DT(F3) DT(E14):DA(F2) chainC ( 6) PHE6 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 2 4 10 0 0 0 ( 31) ARG31 0 0 0 0 0 0 0 0 0 0 0 6 7 prot.sequence mqsinFrtaRgnlsevlnnveageeveitrRgrepavivskatfeaykkaaldae >4zm2_CD:YefM-like; title=ANTITOXIN PHD FROM PHAGE P1 IN COMPLEX WITH ITS OPERATOR DNA INVERTED REPEAT IN A MONOCLINIC SPACE GROUP organism=Enterobacteria phage P1 DNA sequence DA(F2):DT(E14) DT(F3):DA(E13) DG(F4):DC(E12) DT(F5):DA(E11) DG(F6):DC(E10) DT(F7):DA(E9) DA(F8):DT(E8) DC(F9):DG(E7) DA(F10):DT(E6) DC(F11):DG(E5) DA(F12):DT(E4) DA(F13):DT(E3) DG(F14):DC(E2) chainC ( 6) PHE6 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 10 4 2 0 0 0 0 0 0 0 ( 31) ARG31 7 6 0 0 0 0 0 0 0 0 0 0 0 chainD ( 6) PHE6 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 7) ARG7 0 0 0 0 0 0 0 0 4 7 0 0 0 ( 10) ARG10 0 0 0 0 0 0 9 17 3 0 0 0 0 ( 31) ARG31 0 0 0 0 0 0 0 0 0 0 4 4 3 prot.sequence mqsinFrtaRgnlsevlnnveageeveitrRgrepavivskatfeaykkaaldae/mqsinFRtaRgnlsevlnnveageeveitrRgrepavivskatfeaykkaald >4zpk_A:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HETERODIMERIC HIF-2A:ARNT COMPLEX WITH HRE DNA organism=MUS MUSCULUS DNA sequence DA(D2):DG(C20) DG(D4):DC(C19) DA(D5):DT(C18) DC(D6):DG(C17) DC(D7):DG(C16) DC(D8):DG(C15) DG(D9):DC(C14) DC(D10):DG(C13) DA(D11):DT(C12) DC(D12):DG(C11) DG(D13):DC(C10) DT(D14):DA(C9) DA(D15):DT(C8) DC(D16):DG(C7) DG(D17):DC(C6) DC(D18):DG(C5) DA(D19):DT(C4) DG(D20):DC(C3) chainA ( 8) HIS94 0 0 0 0 0 6 3 4 4 0 0 0 0 0 0 0 0 0 ( 12) GLU98 0 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 ( 15) ARG101 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG102 0 0 0 0 0 0 0 0 0 8 16 0 0 0 0 0 0 0 prot.sequence erlarenHseiErrRRnkmtayitelsdmvptcsalarkpdkltilrmavshmkslsfltdqelkhlileaadgflfivscetgrvvyvsdsvtpvlnqpqsewfgstlydqvhpddvdklreqlstsrrsficrmrcgtphfvvvhctgyikfclvaigrlqvtefisrhniegiftfvdhrcvatvgyqpqellgknivefchpedqqllrdsfqqvvklkgqvlsvmfrfrsktrewlwmrtssftfqnpysdeieyiictntnv >4zpk_AB:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HETERODIMERIC HIF-2A:ARNT COMPLEX WITH HRE DNA organism=MUS MUSCULUS DNA sequence DC(C3):DG(D20) DT(C4):DA(D19) DG(C5):DC(D18) DC(C6):DG(D17) DG(C7):DC(D16) DT(C8):DA(D15) DA(C9):DT(D14) DC(C10):DG(D13) DG(C11):DC(D12) DT(C12):DA(D11) DG(C13):DC(D10) DC(C14):DG(D9) DG(C15):DC(D8) DG(C16):DC(D7) DG(C17):DC(D6) DT(C18):DA(D5) DC(C19):DG(D4) DG(C20):DA(D2) chainA ( 8) HIS94 0 0 0 0 0 0 0 0 0 4 4 3 6 0 0 0 0 0 ( 12) GLU98 0 0 0 0 0 0 0 0 1 8 5 0 0 0 0 0 0 0 ( 15) ARG101 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 16) ARG102 0 0 0 0 0 0 0 16 8 0 0 0 0 0 0 0 0 0 chainB ( 12) SER19 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 16) ALA23 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG26 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG27 0 0 0 0 0 0 4 12 12 0 0 0 0 0 0 0 0 0 prot.sequence erlarenHseiErrRRnkmtayitelsdmvptcsalarkpdkltilrmavshmkslsfltdqelkhlileaadgflfivscetgrvvyvsdsvtpvlnqpqsewfgstlydqvhpddvdklreqlstsrrsficrmrcgtphfvvvhctgyikfclvaigrlqvtefisrhniegiftfvdhrcvatvgyqpqellgknivefchpedqqllrdsfqqvvklkgqvlsvmfrfrsktrewlwmrtssftfqnpysdeieyiictntnv/krssselrkekSrdaArcRRsketevfyelahelplphsvsshldkasimrlaisflrthkllssvcseneseaeadqqmdnlylkalegfiavvtqdgdmiflseniskfmgltqveltghsifdfthpcdheeirenltlsterdffmrmkctvtnrgrtvnlksatwkvlhctgqvrvynlscliimcepiqhpshmdipldsktflsrhsmdmkftycddrileligyhpeellgrsayefyhaldsenmtkshqnlctkgqvvsgqyrmlakhggyvwletqgtviynlqpqcimcvnyvlseikndvvfsmdqte >4zpk_B:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HETERODIMERIC HIF-2A:ARNT COMPLEX WITH HRE DNA organism=MUS MUSCULUS DNA sequence DC(C3):DG(D20) DT(C4):DA(D19) DG(C5):DC(D18) DC(C6):DG(D17) DG(C7):DC(D16) DT(C8):DA(D15) DA(C9):DT(D14) DC(C10):DG(D13) DG(C11):DC(D12) DT(C12):DA(D11) DG(C13):DC(D10) DC(C14):DG(D9) DG(C15):DC(D8) DG(C16):DC(D7) DG(C17):DC(D6) DT(C18):DA(D5) DC(C19):DG(D4) DG(C20):DA(D2) chainB ( 12) SER19 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 16) ALA23 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG26 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG27 0 0 0 0 0 0 4 12 12 0 0 0 0 0 0 0 0 0 prot.sequence krssselrkekSrdaArcRRsketevfyelahelplphsvsshldkasimrlaisflrthkllssvcseneseaeadqqmdnlylkalegfiavvtqdgdmiflseniskfmgltqveltghsifdfthpcdheeirenltlsterdffmrmkctvtnrgrtvnlksatwkvlhctgqvrvynlscliimcepiqhpshmdipldsktflsrhsmdmkftycddrileligyhpeellgrsayefyhaldsenmtkshqnlctkgqvvsgqyrmlakhggyvwletqgtviynlqpqcimcvnyvlseikndvvfsmdqte >4zpr_AB:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HETERODIMERIC HIF-1A:ARNT COMPLEX WITH HRE DNA organism=MUS MUSCULUS DNA sequence DC(C3):DG(D20) DT(C4):DA(D19) DG(C5):DC(D18) DC(C6):DG(D17) DG(C7):DC(D16) DT(C8):DA(D15) DA(C9):DT(D14) DC(C10):DG(D13) DG(C11):DC(D12) DT(C12):DA(D11) DG(C13):DC(D10) DC(C14):DG(D9) DG(C15):DC(D8) DG(C16):DC(D7) DG(C17):DC(D6) DC(C19):DG(D4) DG(C20):DA(D2) chainA ( 8) HIS94 0 0 0 0 0 0 0 0 0 9 5 2 0 0 0 0 0 ( 12) GLU98 0 0 0 0 0 0 0 0 0 7 10 1 0 0 0 0 0 ( 15) ARG101 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 16) ARG102 0 0 0 0 0 0 0 13 13 4 0 0 0 0 0 0 0 chainB ( 4) ARG18 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) SER22 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 9) ARG23 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 12) ALA26 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 15) ARG29 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG30 0 0 0 0 0 0 1 10 12 0 0 0 0 0 0 0 0 prot.sequence erlarenHseiErrRRnkmtayitelsdmvptalarkpdkltilrmavshmksltdqelkhlileaadgflfivsgrvvyvsdsvtpvlnqpqsewfgstlydqvhpddvdklreqlsrrsficrmrcvhctgyvaigrlqtefisrhniegiftfvdhrcvatvgyqpqellgknivefchpedqqllrdsfqqvvklkgqvlsvmfwmrtssftfqnpysdeieyiictntnv/serRkekSRdaArsRRskesevfyelahqlplphnvsshldkasvmrltisylrvrklldcfylkaldgfvmvltddgdmvyisdnvnkymgltqfeltghsvfdfthpcdheemremlttqrsfflrmkctltrtmniksatwkvlhctghihclvlicepiphpsniesktflsrhsldmkfsycditelmgyepeellgrsiyeyyhaldsdhltkthhdmftkgqvttgqyrmlakrggyvwvetqatviyntknsqpqcivcvnyvvsgiiqhd >4zpr_B:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HETERODIMERIC HIF-1A:ARNT COMPLEX WITH HRE DNA organism=MUS MUSCULUS DNA sequence DC(C3):DG(D20) DT(C4):DA(D19) DG(C5):DC(D18) DC(C6):DG(D17) DG(C7):DC(D16) DT(C8):DA(D15) DA(C9):DT(D14) DC(C10):DG(D13) DG(C11):DC(D12) DT(C12):DA(D11) DG(C13):DC(D10) DC(C14):DG(D9) DG(C15):DC(D8) DG(C16):DC(D7) DG(C17):DC(D6) DC(C19):DG(D4) DG(C20):DA(D2) chainB ( 4) ARG18 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) SER22 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 9) ARG23 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 12) ALA26 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 15) ARG29 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG30 0 0 0 0 0 0 1 10 12 0 0 0 0 0 0 0 0 prot.sequence serRkekSRdaArsRRskesevfyelahqlplphnvsshldkasvmrltisylrvrklldcfylkaldgfvmvltddgdmvyisdnvnkymgltqfeltghsvfdfthpcdheemremlttqrsfflrmkctltrtmniksatwkvlhctghihclvlicepiphpsniesktflsrhsldmkfsycditelmgyepeellgrsiyeyyhaldsdhltkthhdmftkgqvttgqyrmlakrggyvwvetqatviyntknsqpqcivcvnyvvsgiiqhd >4zq9_ABC:Origin_of_replication-binding_domain,_RBD-like; title=X-RAY STRUCTURE OF AAV-2 OBD BOUND TO AAVS1 SITE 3:1 organism=Adeno-associated virus 2 (isolate Srivastava/1982) / Adeno-associated virus 2 (isolate Srivastava/1982) / Adeno-associated virus 2 (isolate Srivastava/1982) / Adeno-associated virus 2 (isolate Srivastava/1982) / Adeno-associated virus 2 (isolate Srivastava/1982) / Adeno-associated virus 2 (isolate Srivastava/1982) DNA sequence DG(E23):DC(D21) DC(E24):DG(D20) DC(E25):DG(D19) DC(E26):DG(D18) DA(E27):DT(D17) DG(E28):DC(D16) DC(E29):DG(D15) DG(E30):DC(D14) DA(E31):DT(D13) DG(E32):DC(D12) DC(E33):DG(D11) DG(E34):DC(D10) DA(E35):DT(D9) DG(E36):DC(D8) DC(E37):DG(D7) DG(E38):DC(D6) DA(E39):DT(D5) DG(E40):DC(D4) DC(E41):DG(D3) DG(E42):DC(D2) chainA ( 95) MET103 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 ( 99) ARG107 0 0 0 0 0 0 0 0 0 0 3 9 4 0 0 0 0 0 0 0 (130) ARG138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 7 4 (133) ALA141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 chainB ( 98) MET103 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG107 0 0 4 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) ARG138 0 0 0 0 0 0 0 0 4 9 7 2 0 0 0 0 0 0 0 0 chainC ( 94) MET103 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 ( 98) ARG107 0 0 0 0 0 0 4 9 4 0 0 0 0 0 0 0 0 0 0 0 (129) ARG138 0 0 0 0 0 0 0 0 0 0 0 0 1 9 8 3 0 0 0 0 (132) ALA141 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence pgfyeivikvpsdisdsfvnwvaekewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngAgggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhl/pgfyeivikvpsdldgisdsfvnwvaekewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngagggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlt/pgfyeivikvpsdsdsfvnwvaekewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngAgggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthv >4zq9_C:Origin_of_replication-binding_domain,_RBD-like; title=X-RAY STRUCTURE OF AAV-2 OBD BOUND TO AAVS1 SITE 3:1 organism=Adeno-associated virus 2 (isolate Srivastava/1982) / Adeno-associated virus 2 (isolate Srivastava/1982) DNA sequence DG(E23):DC(D21) DC(E24):DG(D20) DC(E25):DG(D19) DC(E26):DG(D18) DA(E27):DT(D17) DG(E28):DC(D16) DC(E29):DG(D15) DG(E30):DC(D14) DA(E31):DT(D13) DG(E32):DC(D12) DC(E33):DG(D11) DG(E34):DC(D10) DA(E35):DT(D9) DG(E36):DC(D8) DC(E37):DG(D7) DG(E38):DC(D6) DA(E39):DT(D5) DG(E40):DC(D4) DC(E41):DG(D3) DG(E42):DC(D2) chainC ( 94) MET103 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 ( 98) ARG107 0 0 0 0 0 0 4 9 4 0 0 0 0 0 0 0 0 0 0 0 (129) ARG138 0 0 0 0 0 0 0 0 0 0 0 0 1 9 8 3 0 0 0 0 (132) ALA141 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence pgfyeivikvpsdsdsfvnwvaekewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngAgggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthv >4zsf_A: title=CRYSTAL STRUCTURE OF PRE-SPECIFIC RESTRICTION ENDONUCLEASE BSAWI-DNA COMPLEX organism=Geobacillus stearothermophilus DNA sequence DC(B1) DT(B2) DC(B3) DG(B4) DA(B5) DC(B6) DC(B7) DG(B8) DG(B9) DT(B10) DC(B11) DG(B12) DA(B13) DG(B14) chainA ( 81) ASN81 0 0 0 0 0 0 0 6 15 0 0 0 0 0 ( 84) LYS84 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 85) LYS85 0 0 0 0 0 0 0 0 1 3 7 0 0 0 prot.sequence mnffeycistyakifeetmnavgdervsqkkairdtmisamrefpnveaaeiwkavysahmdrksgiadpdiiqkvisaeNswKKssghafeemikllgnssleeygmrillqkdlnmmienqeianeprdinwlkeqissnvfdlyitvrnndkeyvfgciqsktsirdrvtrdrepsmkameaffwsvaicldgdflkmpkfiamvnggtsnyrlngwhgmyvfwdkptidriypidinlelfvqhareaaedwlhrrqwfnyewkagqk >4ztf_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS INTASOME WITH A 2- PYRIDINONE AMINAL INHIBITOR organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 9 11 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >4ztj_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS INTASOME WITH A 2- PYRIDINONE AMINAL INHIBITOR organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 10 12 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >4ztu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURAL BASIS FOR PROCESSIVITY AND ANTIVIRAL DRUG TOXICITY IN HUMAN MITOCHONDRIAL DNA REPLICASE organism=HOMO SAPIENS DNA sequence DG(T4):DCT(A4003) DA(T5):DOC(P24) DT(T6):DA(P23) DA(T7):DT(P22) DC(T8):DG(P21) DG(T9):DC(P20) DG(T10):DC(P19) DC(T11):DG(P18) DA(T12):DT(P17) DC(T13):DG(P16) DT(T14):DA(P15) DG(T15):DC(P14) DG(T16):DC(P13) DC(T17):DG(P12) DC(T18):DG(P11) DC(T19):DG(P10) DT(T20):DA(P9) DC(T21):DG(P8) DG(T22):DC(P7) DT(T23):DA(P6) DC(T24):DG(P5) DT(T25):DA(P4) DT(T26):DA(P3) chainA (590) ASN803 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (640) ARG853 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (648) THR861 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (677) ASP890 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (679) ASP892 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (680) SER893 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (681) GLN894 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (682) GLU895 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (719) HIS932 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (730) ARG943 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (734) LYS947 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (735) ILE948 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (738) TYR951 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (742) TYR955 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (748) PHE961 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (853) ASN1098 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (857) GLN1102 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (890) ASP1135 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlsrglheqifgqggempgeaavrrsvehlqkhglwgqpavplpdvelrlpplygdnldqhfrllaqkqslpyleaanlllqaqlppkppawawaegwtrygpegeavpvaipeeralvfavavclaegtcptlavaispsawyswcsqrlveeryswtsqlspadliplevqeqlvvghnvsfdrahireqyliqgsrmrfldtmsmhmaisglssfqrslwiaakaisswdwldissvnslaevhrlyvggpplekeprelfvkgtmkdirenfqdlmqycaqdvwathevfqqqlplflercphpvtlagmlemgvsylpvnqnwerylaeaqgtyeelqremkkslmdlandacqllsgerykedpwlwdlewdlqefkqkkakkvkkepatalgpcseeeefqqdvmaraclqklkgttellpkrpqhlpghpgwyrklcprlddpawtpgpsllslqmrvtpklmaltwdgfplhyserhgwgylnlaklptgttlesagvvcpyraieslyrkhclepyndvdipgcwffklphkdgnscnvgspfakdflpkmedgtlqagpggasgpraleinkmisfwrNahkrissqmvvwlprsalpravirhpdydeeglygailpqvvtagtitrRaveptwlTasnarpdrvgselkamvqappgytlvgadvdsqelwiaavlgdahfagmhgctafgwmtlqgrksrgtdlhsktattvgisrehakIfnYgriYgagqpFaerllmqfnhrltqqeaaekaqqmyaatkgllrkvqretarksqwkkwevvaerawkggtesemfnklesiatsdiprtpvlgccisralepsavqeefmtsrvNwvvQssavdylhlmlvamkwlfeefaidgrfcisihdevrylvreedryraalalqitnlltrcmfayklglndlpqsvaffsavdidrclrkevtmdcktpsnptgmerrygipqgealdiyqiieltk >4ztz_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURAL BASIS FOR PROCESSIVITY AND ANTIVIRAL DRUG TOXICITY IN HUMAN MITOCHONDRIAL DNA REPLICASE organism=HOMO SAPIENS DNA sequence DT(T6):DA(P23) DA(T7):DT(P22) DC(T8):DG(P21) DG(T9):DC(P20) DG(T10):DC(P19) DC(T11):DG(P18) DA(T12):DT(P17) DC(T13):DG(P16) DT(T14):DA(P15) DG(T15):DC(P14) DG(T16):DC(P13) DC(T17):DG(P12) DC(T18):DG(P11) DC(T19):DG(P10) DT(T20):DA(P9) DC(T21):DG(P8) DG(T22):DC(P7) DT(T23):DA(P6) DC(T24):DG(P5) DT(T25):DA(P4) DT(T26):DA(P3) chainA (590) ASN803 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (640) ARG853 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (648) THR861 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (857) GLN1102 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlsrglheqifgqggempgeaavrrsvehlqkhglwgqpavplpdvelrlpplygdnldqhfrllaqkqslpyleaanlllqaqlppkppawawaegwtrygpegeavpvaipeeralvfavavclaegtcptlavaispsawyswcsqrlveeryswtsqlspadliplevqeqlvvghnvsfdrahireqyliqgsrmrfldtmsmhmaisglssfqrslwiaakaisswdwldissvnslaevhrlyvggpplekeprelfvkgtmkdirenfqdlmqycaqdvwathevfqqqlplflercphpvtlagmlemgvsylpvnqnwerylaeaqgtyeelqremkkslmdlandacqllsgerykedpwlwdlewdlqefkqkkakkvkkepatalgpcseeeefqqdvmaraclqklkgttellpkrpqhlpghpgwyrklcprlddpawtpgpsllslqmrvtpklmaltwdgfplhyserhgwgylnlaklptgttlesagvvcpyraieslyrkhclepyndvdipgcwffklphkdgnscnvgspfakdflpkmedgtlqagpggasgpraleinkmisfwrNahkrissqmvvwlprsalpravirhpdydeeglygailpqvvtagtitrRaveptwlTasnarpdrvgselkamvqappgytlvgadvdsqelwiaavlgdahfagmhgctafgwmtlqgrksrgtdlhsktattvgisrehakifnygriygagqpfaerllmqfnhrltqqeaaekaqqmyaatkgllrkvqretarksqwkkwevvaerawkggtesemfnklesiatsdiprtpvlgccisralepsavqeefmtsrvnwvvQssavdylhlmlvamkwlfeefaidgrfcisihdevrylvreedryraalalqitnlltrcmfayklglndlpqsvaffsavdidrclrkevtmdcktpsnptgmerrygipqgealdiyqiieltk >4zux_ABCDEFGH: title=SAGA DUB MODULE UBP8/SGF11/SUS1/SGF73 BOUND TO UBIQITINATED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-27):DG(I28) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DT(J22):DC(I-21) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllRkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >4zux_C:Histone-fold; title=SAGA DUB MODULE UBP8/SGF11/SUS1/SGF73 BOUND TO UBIQITINATED NUCLEOSOME organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DC(I-21):DT(J22) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I28):DC(J-27) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainC ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence trssraglqfpvgrvhrllRkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >5a0m_A:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-SCEI IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF MN organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(D2):DC(K25) DT(D3):DA(K24) DA(D4):DT(K23) DT(D5):DA(K22) DT(D6):DA(K21) DA(D7):DT(K20) DC(D8):DG(K19) DC(D9):DG(K18) DC(D10):DG(K17) DT(D11):DA(K16) DG(D12):DC(K15) DT(D13):DA(C14) DT(D14):DA(C13) DA(D15):DT(C12) DT(D16):DA(C11) DC(L17):DG(C10) DC(L18):DG(C9) DC(L19):DG(C8) DT(L20):DA(C7) DA(L21):DT(C6) DG(L22):DC(C5) DC(L23):DG(C4) DG(L24):DC(C3) DT(L25):DA(C2) chainA ( 12) PRO314 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ASN315 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TYR346 0 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG348 0 0 0 0 0 0 0 11 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG350 0 0 0 0 0 1 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) GLN359 0 0 0 0 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLU361 0 0 0 0 0 0 0 0 0 2 7 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) HIS384 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) LYS386 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG388 0 0 0 0 0 0 0 0 0 20 9 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ASN390 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 89) HIS391 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 94) VAL396 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (100) GLN402 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ASP450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (149) TYR451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 (150) ASN452 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 5 0 0 0 (161) ASN463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (163) GLN465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (190) ASN492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 5 0 0 0 0 0 0 0 (191) LYS493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 6 0 0 0 0 0 0 0 prot.sequence nikknqvmnlgPNskllkeyksqlielnieqfeagiglilgdaYiRsRdegktycmQfEwknkaymdhvcllydqwvlsppHkKeRvNHlgnlVitwgaQtfkhqafnklanlfivnnkktipnnlvenyltpmslaywfmddggkwDYNknstnksivlNtQsftfeeveylvkglrnkfqlncyvkiNKnkpiiyidsmsylifynlikpylipqmmyklpn >5a0w_A:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI E117A IN COMPLEX WITH ITS TARGET DNA AND IN THE PRESENCE OF 2MM MN organism=DESULFUROCOCCUS MOBILIS DNA sequence DC(C1):DG(B25) DG(C2):DC(B24) DC(C3):DG(B23) DG(C4):DC(B22) DC(C5):DG(B21) DC(C6):DG(B20) DG(C7):DC(B19) DG(C8):DC(B18) DA(C9):DT(B17) DA(C10):DT(B16) DC(C11):DG(B15) DT(C12):DA(B14) DT(C13):DA(B13) DA(C14):DT(B12) DC(C15):DG(B11) DC(C16):DG(B10) DC(C17):DG(B9) DG(C18):DC(B8) DG(C19):DC(B7) DC(C20):DG(B6) DA(C21):DT(B5) DA(C22):DT(B4) DG(C23):DC(B3) DG(C24):DC(B2) DC(C25):DG(B1) chainA ( 21) TYR25 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) TYR29 0 0 0 0 2 4 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASN32 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG33 0 0 5 15 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER34 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) GLU35 0 0 0 0 7 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG37 0 0 0 0 0 1 6 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) VAL39 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR41 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL72 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR76 0 0 0 0 0 0 0 0 0 0 0 8 18 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 0 0 0 0 0 0 5 15 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 0 0 3 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) SER83 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 17 0 0 0 0 (122) ARG126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 1 0 0 0 0 0 0 (124) TRP128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 3 0 0 0 0 0 0 0 0 (150) ASP154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 2 0 0 0 0 0 0 (151) ASP155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (153) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 16 0 0 0 0 0 0 0 0 (163) LEU167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence envsgisayllgliigdgglYkLkYkgNRSEyRvViTqksenlikqhiaplmqflidelnvkskiQiVkgdTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaagdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgvyvlnisLrdrikfvhtilsshlnplp >5a39_B:Putative_DNA-binding_domain; title=STRUCTURE OF RAD14 IN COMPLEX WITH CISPLATIN CONTAINING DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(C2):DG(G12) DT(C3):DA(G11) DC(C4):DG(G10) DT(C5):DA(G9) DA(C6):DT(G8) DC(C7):DG(G7) DG(C8):DC(G6) DG(C9):DC(G5) DT(C10):DA(G4) DC(C11):DG(G3) DA(C12):DT(G2) DT(C13):DA(G1) DC(C14):DG(G0) chainB ( 43) THR142 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 46) LYS145 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 69) ASN168 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 71) HIS170 0 0 0 0 0 0 0 0 0 0 0 0 17 ( 75) PHE174 0 0 0 0 0 0 0 0 0 0 0 0 24 prot.sequence apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTecKedyfltdpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahrr >5a3d_A:Putative_DNA-binding_domain; title=STRUCTURAL INSIGHTS INTO THE RECOGNITION OF CISPLATIN AND AAF-DG LESIONS BY RAD14 (XPA) organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(D1):DC(C13) DG(D3):DT(C12) DA(D4):DA(C11) DG(D6):DC(C10) DA(D7):DT(C9) DC(D8):DC(C7) DG(D9):DA(C6) DA(D11):DT(C5) DG(D12):DC(C4) DA(D13):DT(C3) DG(D14):DC(C2) DA(D15):DT(C1) chainA ( 41) THR228 0 0 0 0 0 0 0 0 0 0 0 1 ( 43) THR230 0 0 0 0 0 0 0 0 0 3 0 0 ( 44) GLU231 0 0 0 0 0 0 0 0 0 0 0 1 ( 46) LYS233 0 0 0 0 0 0 0 1 0 0 0 0 ( 53) ASP240 0 0 0 0 0 0 0 2 0 0 0 0 ( 67) LYS254 0 0 0 0 0 0 0 0 0 0 0 1 ( 69) ASN256 0 0 0 0 0 0 0 0 0 0 8 0 ( 71) HIS258 0 0 0 0 0 0 0 0 0 0 18 0 ( 75) PHE262 0 0 0 0 0 0 0 0 0 0 52 0 ( 78) MET265 0 0 0 0 0 0 0 0 0 0 0 7 ( 80) LEU267 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTecKedyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahr >5a3d_AB:Putative_DNA-binding_domain; title=STRUCTURAL INSIGHTS INTO THE RECOGNITION OF CISPLATIN AND AAF-DG LESIONS BY RAD14 (XPA) organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(D1):DC(C13) DG(D3):DT(C12) DA(D4):DA(C11) DG(D6):DC(C10) DA(D7):DT(C9) DC(D8):DC(C7) DG(D9):DA(C6) DA(D11):DT(C5) DG(D12):DC(C4) DA(D13):DT(C3) DG(D14):DC(C2) DA(D15):DT(C1) chainA ( 41) THR228 0 0 0 0 0 0 0 0 0 0 0 1 ( 43) THR230 0 0 0 0 0 0 0 0 0 3 0 0 ( 44) GLU231 0 0 0 0 0 0 0 0 0 0 0 1 ( 46) LYS233 0 0 0 0 0 0 0 1 0 0 0 0 ( 53) ASP240 0 0 0 0 0 0 0 2 0 0 0 0 ( 67) LYS254 0 0 0 0 0 0 0 0 0 0 0 1 ( 69) ASN256 0 0 0 0 0 0 0 0 0 0 8 0 ( 71) HIS258 0 0 0 0 0 0 0 0 0 0 18 0 ( 75) PHE262 0 0 0 0 0 0 0 0 0 0 52 0 ( 78) MET265 0 0 0 0 0 0 0 0 0 0 0 7 ( 80) LEU267 0 0 0 0 0 0 0 0 0 0 0 3 chainB ( 39) LEU226 1 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR230 0 2 0 0 0 0 0 0 0 0 0 0 ( 70) PRO257 1 0 0 0 0 0 0 0 0 0 0 0 ( 78) MET265 8 0 0 0 0 0 0 0 0 0 0 0 ( 80) LEU267 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTecKedyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahr/apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTeckedyfltdpelndedlfhrlekpnphsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahrr >5a72_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH ITS TARGET (SRO1.3) IN THE PRESENCE OF 2 MM CA organism=CHLORELLA VULGARIS DNA sequence DT(D601):DA(C524) DC(D602):DG(C523) DA(D603):DT(C522) DG(D604):DC(C521) DA(D605):DT(C520) DA(D606):DT(C519) DC(D607):DG(C518) DG(D608):DC(C517) DT(D609):DA(C516) DC(D610):DG(C515) DG(D611):DC(C514) DT(D612):DA(C513) DA(D613):DT(C512) DC(D614):DG(C511) DG(D615):DC(C510) DA(D616):DT(C509) DC(D617):DG(C508) DG(D618):DC(C507) DT(D619):DA(C506) DT(D620):DA(C505) DC(D621):DG(C504) DT(D622):DA(C503) DG(D623):DC(C502) DA(D624):DT(C501) chainA ( 20) CYS25 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN29 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL31 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG33 0 0 17 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASP35 3 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR36 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG43 0 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE49 0 0 0 0 0 0 0 0 6 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 22 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 21 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN74 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASP75 0 0 0 0 0 0 0 0 7 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) MET77 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLU79 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS143 0 0 0 0 0 0 0 3 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 20) CYS25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 24) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 ( 26) VAL31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 28) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 17 0 0 ( 30) ASP35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 ( 31) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 ( 38) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 3 0 0 0 0 ( 44) PHE49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 6 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 22 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 21 0 0 0 0 0 0 0 0 ( 69) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 70) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 5 0 0 0 0 0 0 0 0 ( 72) MET77 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 74) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 (138) LYS143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 4 0 0 0 0 0 0 0 prot.sequence nfhdqlkfawlagfvdadgCinaQiVsReDYllkyqvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfCvvggtslqttlekllpylnlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvv/nfhdqlkfawlagfvdadgCinaQiVsReDYllkyqvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylnlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvvs >5a72_B:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH ITS TARGET (SRO1.3) IN THE PRESENCE OF 2 MM CA organism=CHLORELLA VULGARIS DNA sequence DT(D601):DA(C524) DC(D602):DG(C523) DA(D603):DT(C522) DG(D604):DC(C521) DA(D605):DT(C520) DA(D606):DT(C519) DC(D607):DG(C518) DG(D608):DC(C517) DT(D609):DA(C516) DC(D610):DG(C515) DG(D611):DC(C514) DT(D612):DA(C513) DA(D613):DT(C512) DC(D614):DG(C511) DG(D615):DC(C510) DA(D616):DT(C509) DC(D617):DG(C508) DG(D618):DC(C507) DT(D619):DA(C506) DT(D620):DA(C505) DC(D621):DG(C504) DT(D622):DA(C503) DG(D623):DC(C502) DA(D624):DT(C501) chainB ( 20) CYS25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 24) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 ( 26) VAL31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 28) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 17 0 0 ( 30) ASP35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 ( 31) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 ( 38) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 3 0 0 0 0 ( 44) PHE49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 6 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 22 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 21 0 0 0 0 0 0 0 0 ( 69) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 70) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 5 0 0 0 0 0 0 0 0 ( 72) MET77 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 74) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 (138) LYS143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 4 0 0 0 0 0 0 0 prot.sequence nfhdqlkfawlagfvdadgCinaQiVsReDYllkyqvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylnlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvvs >5a74_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH ITS TARGET (SRO1.3) IN THE PRESENCE OF 2 MM MN organism=CHLORELLA VULGARIS DNA sequence DT(C501):DA(F624) DC(C502):DG(F623) DA(C503):DT(F622) DG(C504):DC(F621) DA(C505):DT(F620) DA(C506):DT(F619) DC(C507):DG(F618) DG(C508):DC(F617) DT(C509):DA(F616) DC(C510):DG(F615) DG(C511):DC(D614) DT(C512):DA(D613) DA(C513):DT(D612) DC(C514):DG(D611) DG(E515):DC(D610) DA(E516):DT(D609) DC(E517):DG(D608) DG(E518):DC(D607) DT(E519):DA(D606) DT(E520):DA(D605) DC(E521):DG(D604) DT(E522):DA(D603) DG(E523):DC(D602) DA(E524):DT(D601) chainA ( 20) CYS25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 24) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 ( 26) VAL31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 18 0 0 ( 30) ASP35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 ( 31) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 ( 38) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 3 0 0 0 0 ( 44) PHE49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 7 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 23 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 22 0 0 0 0 0 0 0 0 ( 69) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 70) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 5 0 0 0 0 0 0 0 0 ( 72) MET77 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 74) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 (138) LYS143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 3 0 0 0 0 0 0 0 chainB ( 20) CYS25 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN29 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL31 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG33 0 0 21 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASP35 4 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR36 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG43 0 0 0 0 3 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE49 0 0 0 0 0 0 0 0 5 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 21 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 18 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN74 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASP75 0 0 0 0 0 0 0 0 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) MET77 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLU79 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS143 0 0 0 0 0 0 0 3 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nfhdqlkfawlagfvdadgCinaQiVsReDYllkyqvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylqlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvv/nfhdqlkfawlagfvdadgCinaQiVsReDYllkyqvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylqlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvvs >5a74_B:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH ITS TARGET (SRO1.3) IN THE PRESENCE OF 2 MM MN organism=CHLORELLA VULGARIS DNA sequence DT(D601):DA(E524) DC(D602):DG(E523) DA(D603):DT(E522) DG(D604):DC(E521) DA(D605):DT(E520) DA(D606):DT(E519) DC(D607):DG(E518) DG(D608):DC(E517) DT(D609):DA(E516) DC(D610):DG(E515) DG(D611):DC(C514) DT(D612):DA(C513) DA(D613):DT(C512) DC(D614):DG(C511) DG(F615):DC(C510) DA(F616):DT(C509) DC(F617):DG(C508) DG(F618):DC(C507) DT(F619):DA(C506) DT(F620):DA(C505) DC(F621):DG(C504) DT(F622):DA(C503) DG(F623):DC(C502) DA(F624):DT(C501) chainB ( 20) CYS25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 24) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 ( 26) VAL31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 28) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 21 0 0 ( 30) ASP35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 4 ( 31) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 ( 38) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 3 0 0 0 0 ( 44) PHE49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 5 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 21 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 18 0 0 0 0 0 0 0 0 ( 69) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 70) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 5 0 0 0 0 0 0 0 0 ( 72) MET77 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 74) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 (138) LYS143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 3 0 0 0 0 0 0 0 prot.sequence nfhdqlkfawlagfvdadgCinaQiVsReDYllkyqvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylqlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvvs >5a77_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH I- CREI TARGET (C1221) IN THE PRESENCE OF 2 MM MG REVEALING DNA CLEAVED organism=CHLORELLA VULGARIS DNA sequence DT(C501):DA(F624) DC(C502):DG(F623) DA(C503):DT(F622) DA(C504):DT(F621) DA(C505):DT(F620) DA(C506):DT(F619) DC(C507):DG(F618) DG(C508):DC(F617) DT(C509):DA(F616) DC(C510):DG(F615) DG(C511):DC(D614) DT(C512):DA(D613) DA(C513):DT(D612) DC(C514):DG(D611) DG(E515):DC(D610) DA(E516):DT(D609) DC(E517):DG(D608) DG(E518):DC(D607) DT(E519):DA(D606) DT(E520):DA(D605) DT(E521):DA(D604) DT(E522):DA(D603) DG(E523):DC(D602) DA(E524):DT(D601) chainA ( 24) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 ( 28) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 5 0 0 ( 30) ASP35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 2 ( 31) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 ( 38) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 3 0 0 0 0 ( 44) PHE49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 4 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 23 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 19 0 0 0 0 0 0 0 0 ( 69) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 70) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 4 0 0 0 0 0 0 0 0 ( 72) MET77 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 ( 74) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 (138) LYS143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 chainB ( 20) CYS25 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN29 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL31 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG33 0 0 7 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASP35 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR36 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG43 0 0 0 0 4 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE49 0 0 0 0 0 0 0 0 9 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 23 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 22 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN74 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASP75 0 0 0 0 0 0 0 0 7 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) MET77 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLU79 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS143 0 0 0 0 0 0 0 1 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nfhdqlkfawlagfvdadgcinaQivsReDYllkyQvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylqlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvv/nfhdqlkfawlagfvdadgCinaQiVsReDYllkyqvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylqlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvvs >5a77_B:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH I- CREI TARGET (C1221) IN THE PRESENCE OF 2 MM MG REVEALING DNA CLEAVED organism=CHLORELLA VULGARIS DNA sequence DT(C501):DA(F624) DC(C502):DG(F623) DA(C503):DT(F622) DA(C504):DT(F621) DA(C505):DT(F620) DA(C506):DT(F619) DC(C507):DG(F618) DG(C508):DC(F617) DT(C509):DA(F616) DC(C510):DG(F615) DG(C511):DC(D614) DT(C512):DA(D613) DA(C513):DT(D612) DC(C514):DG(D611) DG(E515):DC(D610) DA(E516):DT(D609) DC(E517):DG(D608) DG(E518):DC(D607) DT(E519):DA(D606) DT(E520):DA(D605) DT(E521):DA(D604) DT(E522):DA(D603) DG(E523):DC(D602) DA(E524):DT(D601) chainB ( 20) CYS25 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN29 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL31 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG33 0 0 7 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASP35 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR36 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG43 0 0 0 0 4 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE49 0 0 0 0 0 0 0 0 9 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 23 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 22 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN74 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASP75 0 0 0 0 0 0 0 0 7 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) MET77 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLU79 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS143 0 0 0 0 0 0 0 1 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nfhdqlkfawlagfvdadgCinaQiVsReDYllkyqvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylqlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvvs >5a78_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH I- CREI TARGET (C1221) IN THE PRESENCE OF 2 MM MG REVEALING DNA NOT CLEAVED organism=CHLORELLA VULGARIS DNA sequence DT(C501):DA(D624) DC(C502):DG(D623) DA(C503):DT(D622) DA(C504):DT(D621) DA(C505):DT(D620) DA(C506):DT(D619) DC(C507):DG(D618) DG(C508):DC(D617) DT(C509):DA(D616) DC(C510):DG(D615) DG(C511):DC(D614) DT(C512):DA(D613) DA(C513):DT(D612) DC(C514):DG(D611) DG(C515):DC(D610) DA(C516):DT(D609) DC(C517):DG(D608) DG(C518):DC(D607) DT(C519):DA(D606) DT(C520):DA(D605) DT(C521):DA(D604) DT(C522):DA(D603) DG(C523):DC(D602) DA(C524):DT(D601) chainA ( 24) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 ( 26) VAL31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 28) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 5 0 0 ( 30) ASP35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 ( 31) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 ( 38) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 3 1 0 0 0 ( 44) PHE49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 4 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 22 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 16 0 0 0 0 0 0 0 0 ( 69) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 70) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 3 0 0 0 0 0 0 0 0 ( 72) MET77 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 ( 74) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 (138) LYS143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 8 0 0 0 0 0 0 0 0 chainB ( 20) CYS25 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN29 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL31 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG33 0 0 6 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASP35 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR36 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG43 0 0 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE49 0 0 0 0 0 0 0 0 4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 23 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 21 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN74 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASP75 0 0 0 0 0 0 0 0 9 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) MET77 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLU79 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS143 0 0 0 0 0 0 0 0 5 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nfhdqlkfawlagfvdadgcinaQiVsReDYllkyQvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylqlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvv/nfhdqlkfawlagfvdadgCinaQiVsReDYllkyQvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylqlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvvs >5a78_B:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE I-CVUI IN COMPLEX WITH I- CREI TARGET (C1221) IN THE PRESENCE OF 2 MM MG REVEALING DNA NOT CLEAVED organism=CHLORELLA VULGARIS DNA sequence DT(C501):DA(D624) DC(C502):DG(D623) DA(C503):DT(D622) DA(C504):DT(D621) DA(C505):DT(D620) DA(C506):DT(D619) DC(C507):DG(D618) DG(C508):DC(D617) DT(C509):DA(D616) DC(C510):DG(D615) DG(C511):DC(D614) DT(C512):DA(D613) DA(C513):DT(D612) DC(C514):DG(D611) DG(C515):DC(D610) DA(C516):DT(D609) DC(C517):DG(D608) DG(C518):DC(D607) DT(C519):DA(D606) DT(C520):DA(D605) DT(C521):DA(D604) DT(C522):DA(D603) DG(C523):DC(D602) DA(C524):DT(D601) chainB ( 20) CYS25 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN29 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL31 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG33 0 0 6 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASP35 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TYR36 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG43 0 0 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE49 0 0 0 0 0 0 0 0 4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 23 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG73 0 0 0 0 0 0 0 0 21 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN74 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASP75 0 0 0 0 0 0 0 0 9 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) MET77 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLU79 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS143 0 0 0 0 0 0 0 0 5 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nfhdqlkfawlagfvdadgCinaQiVsReDYllkyQvRvsltvFqsttqhfilldiqkilgcgtvRkRNDgMsEfcvvggtslqttlekllpylqlkraqaklvlqiikklpntkdpsvlmeaalladkvglltdgkKrtilaenvreclkklghvvs >5ak9_A:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF 2MM MN organism=DESULFUROCOCCUS MOBILIS DNA sequence DG(B1):DC(D25) DC(B2):DG(D24) DC(B3):DG(D23) DT(B4):DA(D22) DT(B5):DA(D21) DG(B6):DC(D20) DC(B7):DG(D19) DC(B8):DG(D18) DG(B9):DC(D17) DG(B10):DC(D16) DG(B11):DC(D15) DT(B12):DA(D14) DA(B13):DT(D13) DA(B14):DT(D12) DG(C15):DC(D11) DT(C16):DA(D10) DT(C17):DA(D9) DC(C18):DG(D8) DC(C19):DG(D7) DG(C20):DC(D6) DG(C21):DC(D5) DC(C22):DG(D4) DG(C23):DC(D3) DC(C24):DG(D2) DG(C25):DC(D1) chainA ( 21) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 25) TYR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 4 2 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 14 13 5 0 0 ( 30) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 31) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 5 0 0 0 0 ( 33) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 6 0 0 0 0 0 0 ( 35) VAL39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 37) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 68) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 71) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 ( 72) THR76 0 0 0 0 0 0 0 0 0 0 0 0 5 9 1 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 7 1 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 4 0 0 0 0 0 0 ( 79) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (120) ARG124 0 0 0 0 17 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG126 0 0 0 0 0 0 1 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TRP128 0 0 0 0 0 0 0 0 3 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) HIS152 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ASP154 0 0 0 0 0 0 4 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ASP155 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG157 0 0 0 0 0 0 0 0 16 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) HIS158 0 0 0 0 0 0 0 0 0 0 3 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) VAL160 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU167 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence envsgisayllgliigdgglYkLkYkgnRSEyRvViTaksenlikqhiaplmqflidelnvkskiQiVkgDTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdmtlkRlRiWnknkalleivsrwlnnlgvrntiHlDDhRHgVyvlnisLrdrikfvhtilsshlnplpp >5akf_I:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA NICKED IN THE CODING STRAND A AND IN THE PRESENCE OF 2MM MN organism=DESULFUROCOCCUS MOBILIS DNA sequence DG(J1):DC(L25) DC(J2):DG(L24) DC(J3):DG(L23) DT(J4):DA(L22) DT(J5):DA(L21) DG(J6):DC(L20) DC(J7):DG(L19) DC(J8):DG(L18) DG(J9):DC(L17) DG(J10):DC(L16) DG(J11):DC(L15) DT(J12):DA(L14) DA(J13):DT(L13) DA(J14):DT(L12) DG(K15):DC(L11) DT(K16):DA(L10) DT(K17):DA(L9) DC(K18):DG(L8) DC(K19):DG(L7) DG(K20):DC(L6) DG(K21):DC(L5) DC(K22):DG(L4) DG(K23):DC(L3) DC(K24):DG(L2) DG(K25):DC(L1) chainI ( 21) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 25) TYR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 5 2 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 16 5 0 0 ( 30) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 31) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 6 0 0 0 0 ( 33) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 6 1 0 0 0 0 0 ( 35) VAL39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 37) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 71) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 ( 72) THR76 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 5 0 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 4 0 0 0 0 0 0 ( 79) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 (120) ARG124 0 0 0 0 4 10 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG126 0 0 0 0 0 0 1 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TRP128 0 0 0 0 0 0 0 0 6 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ASP154 0 0 0 0 0 0 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ASP155 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG157 0 0 0 0 0 0 0 0 13 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) HIS158 0 0 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) VAL160 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU167 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence envsgisayllgliigdgglYkLkYkgnRSEyRvViTaksenlikqhiaplmqflidelnvkskiQivkgDTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdmtlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnisLrdrikfvhtils >5akm_A:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI G20S IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF 2MM MG organism=DESULFUROCOCCUS MOBILIS DNA sequence DG(B11):DC(D15) DT(B12):DA(D14) DA(B13):DT(D13) DA(B14):DT(D12) DG(C15):DC(D11) DT(C16):DA(D10) DT(C17):DA(D9) DC(C18):DG(D8) DC(C19):DG(D7) DG(C20):DC(D6) DG(C21):DC(D5) DC(C22):DG(D4) DG(C23):DC(D3) DC(C24):DG(D2) DG(C25):DC(D1) chainA ( 21) TYR25 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 25) TYR29 0 0 0 0 0 0 0 7 11 2 2 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 3 8 15 5 0 0 ( 30) SER34 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 31) GLU35 0 0 0 0 0 0 0 0 2 10 3 0 0 0 0 ( 33) ARG37 0 0 0 0 0 0 5 11 6 0 0 0 0 0 0 ( 37) THR41 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 72) THR76 0 0 12 11 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 10 14 3 0 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 0 0 1 13 3 0 0 0 0 0 0 ( 79) SER83 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (151) ASP155 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG157 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) HIS158 3 32 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) VAL160 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence envsgisayllgliisdgglYkLkYkgnRSEyRvviTqksenlikqhiaplmqflidelnvkskiQivkgdTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkrlriwnknkalleivsrwlnnlgvrntihldDhRHgVyvlnislrdrikfvhtilsshlnplpp >5akn_K:Homing_endonucleases; title=THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA NICKED IN THE NON-CODING STRAND B AND IN THE PRESENCE OF 2MM MN organism=DESULFUROCOCCUS MOBILIS DNA sequence DG(L1):DC(O25) DC(L2):DG(O24) DC(L3):DG(O23) DT(L4):DA(O22) DT(L5):DA(O21) DG(L6):DC(O20) DC(L7):DG(O19) DC(L8):DG(O18) DG(L9):DC(O17) DG(L10):DC(O16) DG(L11):DC(M1040) DT(L12):DA(M1039) DA(L13):DT(M1038) DA(L14):DT(M1037) DG(M15):DC(M1036) DT(M16):DA(M1035) DT(M17):DA(M1034) DC(M18):DG(M1033) DC(M19):DG(M1032) DG(M20):DC(M1031) DG(M21):DC(M1030) DC(M22):DG(M1029) DG(M23):DC(M1028) DC(M24):DG(M1027) DG(M25):DC(M1026) chainK ( 21) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 25) TYR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 4 1 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 15 6 0 0 ( 30) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 31) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 5 0 0 0 0 ( 33) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 6 2 0 0 0 0 0 ( 37) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 68) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 71) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 ( 72) THR76 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 7 15 8 0 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 4 0 0 0 0 0 0 ( 79) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 (120) ARG124 0 0 0 0 15 8 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG126 0 0 0 0 0 0 1 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TRP128 0 0 0 0 0 0 0 0 6 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ASP154 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ASP155 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG157 0 0 0 0 0 0 0 0 13 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) HIS158 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) VAL160 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU167 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence envsgisayllgliigdgglYkLkYkgnRSEyRvviTaksenlikqhiaplmqflidelnvkskiQiVkgDTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdmtlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnisLrdrikfvhtilsshlnplpp >5av5_A:Histone-fold; title=HUMAN NUCLEOSOME CORE PARTICLE organism=? DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >5av5_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RKrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5av6_A:Histone-fold; title=HUMAN NUCLEOSOME CORE PARTICLE organism=? DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >5av6_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 1) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkGnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RKrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5av8_A:Histone-fold; title=HUMAN NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >5av8_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 1) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkGnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RKrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5av9_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 1) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkGnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RKrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsrkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5av9_F:Histone-fold; title=HUMAN NUCLEOSOME CORE PARTICLE organism=? DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >5avb_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RKrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyserVgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5avb_H:Histone-fold; title=HUMAN NUCLEOSOME CORE PARTICLE organism=? DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5avc_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 1) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkGnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RKrsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyserVgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5awh_B:Ribonuclease_H-like; title=RHODOBACTER SPHAEROIDES ARGONAUTE IN COMPLEX WITH GUIDE RNA/TARGET DNA HETERODUPLEX organism=Rhodobacter sphaeroides DNA sequence DA(F17) DT(F16) DG(F15) DT(F14) DT(F13) DG(F12) DG(F11) DA(F10) DT(F9) DG(F8) DA(F7) DT(F6) DG(F5) DG(F4) DA(F3) DG(F2) DC(F1):DG(F2) chainB ( 25) PRO45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 ( 43) TRP63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 3 (188) LYS245 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 (434) SER491 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) TYR494 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) THR495 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) ASN498 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (484) ARG541 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (583) ASP640 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (630) LYS692 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qlvsngfevnlpdqvevivrdlpdPskvkeertrlmgywfvhWfdgklfhlrikaggpnvdgehrairtaehpwllrarlddaleealpkyaavkkrpftflaqkdelidaaataaglshrllnsfkviprfalspkiyepvdgttrvgvfvtigmrydieaslrgmyvvrrkrrgllgrvaklegsKenftrclsallghnykkllnalddqeagyrtgprfddavrrmgeflakkpirladninaqvgdrivfsnegqarnvrlapkveYvfdrtgaksaeYawrglsqfgpfdrpsfanrsprilvvypsstqgkvenflsafrdgmgsnysgfskgfvdlmgltkvefvmcpvevssadrngahtkynsaiedklagagevhagivvlfedharlpddrnpyihtksllltlgvptqqvrmptvllepkSlqYTlqNfsiatyaklngtpwtvnhdkaindelvvgmglaElsgsrtekRqrfvgittvfagdgsyllgnvskeceyegysdairesmtgilrelkkrnnwrpgdtvrvvfhahRplkrvdvasivfectreigsdqniqmafvtvshDhpfvlidrsergleaarkgvfappRgaisrvgrltrllavnSpQLiKrantplptpllvslhpdstfkdvdylaeqalkftSlswrstLPaatpvtifyseriaellgrlksipnwssanlniklkwsrwfl >5axw_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS CAS9 IN COMPLEX WITH SGRNA AND TARGET DNA (TTGGGT PAM) organism=Staphylococcus aureus subsp. aureus DNA sequence DT(D1):DA(C8) DT(D2):DA(C7) DG(D3):DC(C6) DG(D4):DC(C5) DG(D5):DC(C4) DT(D6):DA(C3) DA(D7):DT(C2) DG(D8):DC(C1) chainA (976) ASN985 0 0 2 9 0 0 0 0 (977) ASN986 0 0 0 0 2 0 0 0 (980) LEU989 0 0 0 0 0 1 0 0 (982) ARG991 0 0 0 0 4 9 5 3 (993) ARG1002 0 1 0 0 0 0 0 0 (1004) PRO1013 0 0 0 0 3 0 0 0 (1006) ARG1015 0 25 13 5 0 0 0 0 prot.sequence rnyilgldigitsvgygiidyetrdvidagvrlfkeanvennegrrskrgarrlkrrrrhriqrvkkllfdynlltdhselsginpyearvkglsqklseeefsaallhlakrrgvhnvneveedtgnelstkeqisrnskaleekyvaelqlerlkkdgevrgsinrfktsdyvkeakqllkvqkayhqldqsfidtyidlletrrtyyegpgegspfgwkdikewyemlmghctyfpeelrsvkyaynadlynalndlnnlvitrdenekleyyekfqiienvfkqkkkptlkqiakeilvneedikgyrvtstgkpeftnlkvyhdikditarkeiienaelldqiakiltiyqssediqeeltnlnseltqeeieqisnlkgytgthnlslkainlildelwhtndnqiaifnrlklvpkkvdlsqqkeipttlvddfilspvvkrsfiqsikvinaiikkyglpndiiielareknskdaqkminemqkrnrqtnerieeiirttgkenakyliekiklhdmqegkclysleaipledllnnpfnyevdhiiprsvsfdnsfnnkvlvkqeeaskkgnrtpfqylsssdskisyetfkkhilnlakgkgrisktkkeylleerdinrfsvqkdfinrnlvdtryatrglmnllrsyfrvnnldvkvksinggftsflrrkwkfkkernkgykhhaedaliianadfifkewkkldkakkvmenqmfmpeieteqeykeifitphqikhikdfkdykyshrvdkkpnrelindtlystrkddkgntlivnnlnglydkdndklkklinkspekllmyhhdpqtyqklklimeqygdeknplykyyeetgnyltkyskkdngpvikkikyygnklnahlditddypnsrnkvvklslkpyrfdvyldngvykfvtvknldvikkenyyevnskayeeakklkkisnqaefiasfynndlikingelyrvigvNNdlLnRievnmidityReylenmndkrPpRiiktiasktqsikkystdilgnlyevkskkhpqiikk >5ay8_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CONTAINING H3.Y organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) HIS39 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRykpgtlalreirkyqkstqlllrkLpfqrlvreiaqaispdlRfqsaaigalqeaseaylvqlfedtnlcaiharrvtimprdmqlarrlrreg/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/pHRykpgtlalreirkyqkstqlllrkLpfqrlvreiaqaispdlRfqsaaigalqeaseaylvqlfedtnlcaiharrvtimprdmqlarrlrre/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrKgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgIsskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5ay8_E:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CONTAINING H3.Y organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainE ( 2) HIS39 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRykpgtlalreirkyqkstqlllrkLpfqrlvreiaqaispdlRfqsaaigalqeaseaylvqlfedtnlcaiharrvtimprdmqlarrlrre >5b0y_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING HISTONE H3 WITH THE CROTONYLATED LYSINE 122 organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 1) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence HRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnysErvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5b0z_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING H3.2, AT 1.98 A RESOLUTION organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 13) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/rakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/kvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kesysiyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5b0z_G:Histone-fold; title=THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING H3.2, AT 1.98 A RESOLUTION organism=? DNA sequence DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >5b1l_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE MOUSE NUCLEOSOME STRUCTURE CONTAINING H3T organism=MUS MUSCULUS DNA sequence DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 6) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYhPgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeacesylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/grkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytss/phRYhpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeacesylvglfedtnlcaihakrvtimpkdiqlarrirger/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/Rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytss >5b1l_B:Histone-fold; title=THE MOUSE NUCLEOSOME STRUCTURE CONTAINING H3T organism=? DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >5b1m_A:Histone-fold; title=THE MOUSE NUCLEOSOME STRUCTURE CONTAINING H3.1 organism=? DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger >5b1m_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE MOUSE NUCLEOSOME STRUCTURE CONTAINING H3.1 organism=MUS MUSCULUS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 9) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 14) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rgrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytss/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvGrvhrllrkgnysErvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlKqvhpdtgisskaMgimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytss >5b24_A:Histone-fold; title=THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING CYCLOBUTANE PYRIMIDINE DIMER organism=HOMO SAPIENS DNA sequence DA(J146):DT(I145) DT(J147):DA(I144) DC(J148):DG(I143) DA(J149):DT(I142) DA(J150):DT(I141) DT(J151):DA(I140) DA(J152):DT(I139) DT(J153):DA(I138) DC(J154):DG(I137) DC(J155):DG(I136) DA(J156):DT(I135) DC(J157):DG(I134) DC(J158):DG(I133) DT(J159):DA(I132) DG(J160):DC(I131) DC(J161):DG(I130) DA(J162):DT(I129) DG(J163):DC(I128) DA(J164):DT(I127) DT(J165):DA(I126) DT(J166):DA(I125) DC(J167):DG(I124) DT(J168):DA(I123) DA(J169):DT(I122) DC(J170):DG(I121) DC(J171):DG(I120) DA(J174):DT(I119) DA(J175):DT(I118) DG(J176):DC(I116) DT(J177):DA(I115) DG(J178):DC(I114) DT(J179):DA(I113) DA(J180):DT(I112) DT(J181):DA(I111) DT(J182):DA(I110) DT(J183):DA(I109) DG(J184):DC(I108) DG(J185):DC(I107) DA(J186):DT(I106) DA(J187):DT(I105) DA(J188):DT(I104) DC(J189):DG(I103) DT(J190):DA(I102) DG(J191):DC(I101) DC(J192):DG(I100) DT(J193):DA(I99) DC(J194):DG(I98) DC(J195):DG(I97) DA(J196):DT(I96) DT(J197):DA(I95) DC(J198):DG(I94) DA(J199):DT(I93) DA(J200):DT(I92) DA(J201):DT(I91) DA(J202):DT(I90) DG(J203):DC(I89) DG(J204):DC(I88) DC(J205):DG(I87) DA(J206):DT(I86) DT(J207):DA(I85) DG(J208):DC(I84) DT(J209):DA(I83) DT(J210):DA(I82) DC(J211):DG(I81) DA(J212):DT(I80) DG(J213):DC(I79) DC(J214):DG(I78) DT(J215):DA(I77) DG(J216):DC(I76) DA(J217):DT(I75) DA(J218):DT(I74) DT(J219):DA(I73) DT(J220):DA(I72) DC(J221):DG(I71) DA(J222):DT(I70) DG(J223):DC(I69) DC(J224):DG(I68) DT(J225):DA(I67) DG(J226):DC(I66) DA(J227):DT(I65) DA(J228):DT(I64) DC(J229):DG(I63) DA(J230):DT(I62) DT(J231):DA(I61) DG(J232):DC(I60) DC(J233):DG(I59) DC(J234):DG(I58) DT(J235):DA(I57) DT(J236):DA(I56) DT(J237):DA(I55) DT(J238):DA(I54) DG(J239):DC(I53) DA(J240):DT(I52) DT(J241):DA(I51) DG(J242):DC(I50) DG(J243):DC(I49) DA(J244):DT(I48) DG(J245):DC(I47) DC(J246):DG(I46) DA(J247):DT(I45) DG(J248):DC(I44) DT(J249):DA(I43) DT(J250):DA(I42) DT(J251):DA(I41) DC(J252):DG(I40) DC(J253):DG(I39) DA(J254):DT(I38) DA(J255):DT(I37) DA(J256):DT(I36) DT(J257):DA(I35) DA(J258):DT(I34) DC(J259):DG(I33) DA(J260):DT(I32) DC(J261):DG(I31) DT(J263):DA(I28) DT(J264):DA(I27) DG(J265):DC(I26) DG(J266):DC(I25) DT(J267):DA(I24) DA(J268):DT(I23) DG(J269):DC(I22) DA(J270):DT(I21) DA(J271):DT(I20) DT(J272):DA(I19) DC(J273):DG(I18) DT(J274):DA(I17) DG(J275):DC(I16) DC(J276):DG(I15) DA(J277):DT(I14) DG(J278):DC(I13) DG(J279):DC(I12) DT(J280):DA(I11) DG(J281):DC(I10) DG(J282):DC(I9) DA(J283):DT(I8) DT(J284):DA(I7) DA(J285):DT(I6) DT(J286):DA(I5) DT(J287):DA(I4) DG(J288):DC(I3) DA(J289):DT(I2) DT(J290):DA(I1) chainA ( 2) HIS39 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger >5b24_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING CYCLOBUTANE PYRIMIDINE DIMER organism=HOMO SAPIENS DNA sequence DA(J146):DT(I145) DT(J147):DA(I144) DC(J148):DG(I143) DA(J149):DT(I142) DA(J150):DT(I141) DT(J151):DA(I140) DA(J152):DT(I139) DT(J153):DA(I138) DC(J154):DG(I137) DC(J155):DG(I136) DA(J156):DT(I135) DC(J157):DG(I134) DC(J158):DG(I133) DT(J159):DA(I132) DG(J160):DC(I131) DC(J161):DG(I130) DA(J162):DT(I129) DG(J163):DC(I128) DA(J164):DT(I127) DT(J165):DA(I126) DT(J166):DA(I125) DC(J167):DG(I124) DT(J168):DA(I123) DA(J169):DT(I122) DC(J170):DG(I121) DC(J171):DG(I120) DA(J174):DT(I119) DA(J175):DT(I118) DG(J176):DC(I116) DT(J177):DA(I115) DG(J178):DC(I114) DT(J179):DA(I113) DA(J180):DT(I112) DT(J181):DA(I111) DT(J182):DA(I110) DT(J183):DA(I109) DG(J184):DC(I108) DG(J185):DC(I107) DA(J186):DT(I106) DA(J187):DT(I105) DA(J188):DT(I104) DC(J189):DG(I103) DT(J190):DA(I102) DG(J191):DC(I101) DC(J192):DG(I100) DT(J193):DA(I99) DC(J194):DG(I98) DC(J195):DG(I97) DA(J196):DT(I96) DT(J197):DA(I95) DC(J198):DG(I94) DA(J199):DT(I93) DA(J200):DT(I92) DA(J201):DT(I91) DA(J202):DT(I90) DG(J203):DC(I89) DG(J204):DC(I88) DC(J205):DG(I87) DA(J206):DT(I86) DT(J207):DA(I85) DG(J208):DC(I84) DT(J209):DA(I83) DT(J210):DA(I82) DC(J211):DG(I81) DA(J212):DT(I80) DG(J213):DC(I79) DC(J214):DG(I78) DT(J215):DA(I77) DG(J216):DC(I76) DA(J217):DT(I75) DA(J218):DT(I74) DT(J219):DA(I73) DT(J220):DA(I72) DC(J221):DG(I71) DA(J222):DT(I70) DG(J223):DC(I69) DC(J224):DG(I68) DT(J225):DA(I67) DG(J226):DC(I66) DA(J227):DT(I65) DA(J228):DT(I64) DC(J229):DG(I63) DA(J230):DT(I62) DT(J231):DA(I61) DG(J232):DC(I60) DC(J233):DG(I59) DC(J234):DG(I58) DT(J235):DA(I57) DT(J236):DA(I56) DT(J237):DA(I55) DT(J238):DA(I54) DG(J239):DC(I53) DA(J240):DT(I52) DT(J241):DA(I51) DG(J242):DC(I50) DG(J243):DC(I49) DA(J244):DT(I48) DG(J245):DC(I47) DC(J246):DG(I46) DA(J247):DT(I45) DG(J248):DC(I44) DT(J249):DA(I43) DT(J250):DA(I42) DT(J251):DA(I41) DC(J252):DG(I40) DC(J253):DG(I39) DA(J254):DT(I38) DA(J255):DT(I37) DA(J256):DT(I36) DT(J257):DA(I35) DA(J258):DT(I34) DC(J259):DG(I33) DA(J260):DT(I32) DC(J261):DG(I31) DT(J263):DA(I28) DT(J264):DA(I27) DG(J265):DC(I26) DG(J266):DC(I25) DT(J267):DA(I24) DA(J268):DT(I23) DG(J269):DC(I22) DA(J270):DT(I21) DA(J271):DT(I20) DT(J272):DA(I19) DC(J273):DG(I18) DT(J274):DA(I17) DG(J275):DC(I16) DC(J276):DG(I15) DA(J277):DT(I14) DG(J278):DC(I13) DG(J279):DC(I12) DT(J280):DA(I11) DG(J281):DC(I10) DG(J282):DC(I9) DA(J283):DT(I8) DT(J284):DA(I7) DA(J285):DT(I6) DT(J286):DA(I5) DT(J287):DA(I4) DG(J288):DC(I3) DA(J289):DT(I2) DT(J290):DA(I1) chainA ( 2) HIS39 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 63) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/nIQGitkpairrlarrggvkrisgliyEetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiQtavrlllpgelakhavsegtkavtkytsa >5b2i_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN NUCLEOSOME CONTAINING CPG UNMETHYLATED DNA organism=HOMO SAPIENS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DT(J-54):DA(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DA(J-24):DT(I24) DC(J-23):DG(I23) DT(J-22):DA(I22) DG(J-21):DC(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DC(J-6):DG(I6) DG(J-5):DC(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DC(J4):DG(I-4) DG(J5):DC(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DC(J20):DG(I-20) DA(J21):DT(I-21) DG(J22):DC(I-22) DT(J23):DA(I-23) DT(J24):DA(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DT(J51):DA(I-51) DA(J52):DT(I-52) DA(J53):DT(I-53) DC(J54):DG(I-54) DT(J55):DA(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) HIS39 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH prot.sequence kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RkrsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/hrKVLrdniqgitkpairrlarrggvkrIsgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akTRSsraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRKEsysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5b2i_C:Histone-fold; title=HUMAN NUCLEOSOME CONTAINING CPG UNMETHYLATED DNA organism=HOMO SAPIENS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DT(J-54):DA(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DA(J-24):DT(I24) DC(J-23):DG(I23) DT(J-22):DA(I22) DG(J-21):DC(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DC(J-6):DG(I6) DG(J-5):DC(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DC(J4):DG(I-4) DG(J5):DC(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DC(J20):DG(I-20) DA(J21):DT(I-21) DG(J22):DC(I-22) DT(J23):DA(I-23) DT(J24):DA(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DT(J51):DA(I-51) DA(J52):DT(I-52) DA(J53):DT(I-53) DC(J54):DG(I-54) DT(J55):DA(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >5b2j_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN NUCLEOSOME CONTAINING CPG METHYLATED DNA organism=HOMO SAPIENS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) 5CM(J-62):DG(I62) DG(J-61):5CM(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DT(J-54):DA(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DA(J-24):DT(I24) DC(J-23):DG(I23) DT(J-22):DA(I22) DG(J-21):DC(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) 5CM(J-6):DG(I6) DG(J-5):5CM(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) 5CM(J4):DG(I-4) DG(J5):5CM(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DC(J20):DG(I-20) DA(J21):DT(I-21) DG(J22):DC(I-22) DT(J23):DA(I-23) DT(J24):DA(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DT(J51):DA(I-51) DA(J52):DT(I-52) DA(J53):DT(I-53) DC(J54):DG(I-54) DT(J55):DA(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) 5CM(J60):DG(I-60) DG(J61):5CM(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RkrsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/hrkVLrdniqgitkpairrlarrggvkrIsgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktRSsraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsrKEsysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5b2o_A: title=CRYSTAL STRUCTURE OF FRANCISELLA NOVICIDA CAS9 IN COMPLEX WITH SGRNA AND TARGET DNA (TGG PAM) organism=FRANCISELLA TULARENSIS SUBSP. NOVICIDA U112 DNA sequence DC(C1):DG(D9) DC(C2):DG(D8) DG(C3):DC(D7) DA(C4):DT(D6) DT(C5):DA(D5) DA(C6):DT(D4) DC(C7):DG(D3) DC(C8):DG(D2) DA(C9):DT(D1) chainA (1074) ARG1241 0 0 0 0 0 0 0 2 1 (1282) GLU1449 0 0 0 0 0 0 0 1 0 (1305) ASP1472 0 0 0 0 0 0 0 0 7 (1306) SER1473 0 0 0 0 0 0 0 13 3 (1307) ARG1474 0 0 0 0 0 0 0 0 51 (1388) SER1555 0 0 0 0 0 0 5 0 0 (1389) ARG1556 0 0 0 0 0 1 11 7 0 (1418) ARG1585 0 0 0 0 0 0 3 10 10 (1419) TYR1586 0 0 0 0 0 0 0 0 6 prot.sequence mnfkilpiaidlgvkntgvfsafyqkgtslerldnkngkvyelskdsytllmnnrtarrhqrrgidrkqlvkrlfkliwteqlnlewdkdtqqaisflfnrrgfsfitdgysvkailmdifddyngeddsylklateqeskiseiynklmqkilefklmklctdikddtlkeitsyefelladylanyseslktqkfyniqeflkrhatindrildtlltddldiwnfnfelhhfvfavnkiksemasggrhrsqyfqeitnvldennhqegylknfcenlhnkkysnlsvknlvnlignlsnlelkplrkyfndkihakadhwdeqkftetychwilgewrvgvkdqdkkdgakysykdlcnelkqkvtkaglvdflleldpcrtippyldnnnrkppkcqslilnpkfldnqypnwqqylqelkklqsiqnyldsfetdlkvlksskdqpyfveykssnqqiasgqrdykdldarilqfifdrvkasdelllneiyfqakklkqesskkldeviansqlsqilksqhtngifeqgtflhlvckyykqrqrardsrlyimpeyrydkklhkynntgrfdddnqlltycnhkprqkryqllndlagvlqvspnflkdkigsdddlfiskwlvehirgfkkacedslkiqkdnrgllnhkiniarntkgkcekeifnlickiegykhglayelgvllfgepneaskpefdrkikkfnsiysfaqiqqiafaerkgnantcavcsadnahrmqqikiilsakaqrlpaiptrivdgavkkmatilaknivddnwqnikqvlsakhqlhipiitesnafefepaladvkgkslkdrrkkalerispenifkdknnrikefaeeldhiiprtlndeanlicvtgnrifclrdnyrsfinltpqeqkafrhalfladenpikqavirainnrnrtfvngtqryfaevlanniylrakkenlntdkisfdyfgiptigngrgiaeirqlyekvdsdiqayakgdkpqasyshlidamlafciaadehrndgsigleidknyslypdifsqikitdnefsdkklvrkkaiegfnthrqmtRdgiyaenylpilihkelnevrkgytwknseeikifkgkkydiqqlnnlvyclkfvdkpisidiqistleelrnilttnniaataeyyyinlktqklheyyienyntalgykkyskemeflrslayrservkiksiddvkqvldkdsnfiigkitlpfkkewqrlyrewqnttikddyeflksffnvksitklhkkvrkdfslpistnEgkflvkrktwdnnfiyqilndsDSRadgtkpfipafdiskneiveaiidsftsknifwlpknielqkvdnknifaidtskwfevetpsdlrdigiatiqykidnnSRpkvrvkldyvidddskinyfmnhsllksRYpdkvleilkqstiiefessgfnktikemlgmklagi >5b2p_A: title=CRYSTAL STRUCTURE OF FRANCISELLA NOVICIDA CAS9 IN COMPLEX WITH SGRNA AND TARGET DNA (TGA PAM) organism=FRANCISELLA TULARENSIS SUBSP. NOVICIDA U112 DNA sequence DC(C1):DG(D9) DC(C2):DG(D8) DG(C3):DC(D7) DA(C4):DT(D6) DT(C5):DA(D5) DA(C6):DT(D4) DT(C7):DA(D3) DC(C8):DG(D2) DA(C9):DT(D1) chainA (1074) ARG1241 0 0 0 0 0 0 0 2 1 (1282) GLU1449 0 0 0 0 0 0 0 1 0 (1305) ASP1472 0 0 0 0 0 0 0 0 7 (1306) SER1473 0 0 0 0 0 0 0 11 3 (1307) ARG1474 0 0 0 0 0 0 0 0 50 (1388) SER1555 0 0 0 0 0 0 3 0 0 (1389) ARG1556 0 0 0 0 0 0 10 5 0 (1418) ARG1585 0 0 0 0 0 0 3 10 9 (1419) TYR1586 0 0 0 0 0 0 0 0 5 prot.sequence mnfkilpiaidlgvkntgvfsafyqkgtslerldnkngkvyelskdsytllmnnrtarrhqrrgidrkqlvkrlfkliwteqlnlewdkdtqqaisflfnrrgfsfitdgysvkailmdifddyngeddsylklateqeskiseiynklmqkilefklmklctdikddtlkeitsyefelladylanyseslktqkfyniqeflkrhatindrildtlltddldiwnfnfelhhfvfavnkiksemasggrhrsqyfqeitnvldennhqegylknfcenlhnkkysnlsvknlvnlignlsnlelkplrkyfndkihakadhwdeqkftetychwilgewrvgvkdqdkkdgakysykdlcnelkqkvtkaglvdflleldpcrtippyldnnnrkppkcqslilnpkfldnqypnwqqylqelkklqsiqnyldsfetdlkvlksskdqpyfveykssnqqiasgqrdykdldarilqfifdrvkasdelllneiyfqakklkqesskkldeviansqlsqilksqhtngifeqgtflhlvckyykqrqrardsrlyimpeyrydkklhkynntgrfdddnqlltycnhkprqkryqllndlagvlqvspnflkdkigsdddlfiskwlvehirgfkkacedslkiqkdnrgllnhkiniarntkgkcekeifnlickiegykhglayelgvllfgepneaskpefdrkikkfnsiysfaqiqqiafaerkgnantcavcsadnahrmqqikiilsakaqrlpaiptrivdgavkkmatilaknivddnwqnikqvlsakhqlhipiitesnafefepaladvkgkslkdrrkkalerispenifkdknnrikefaeeldhiiprtlndeanlicvtgnrifclrdnyrsfinltpqeqkafrhalfladenpikqavirainnrnrtfvngtqryfaevlanniylrakkenlntdkisfdyfgiptigngrgiaeirqlyekvdsdiqayakgdkpqasyshlidamlafciaadehrndgsigleidknyslypdifsqikitdnefsdkklvrkkaiegfnthrqmtRdgiyaenylpilihkelnevrkgytwknseeikifkgkkydiqqlnnlvyclkfvdkpisidiqistleelrnilttnniaataeyyyinlktqklheyyienyntalgykkyskemeflrslayrservkiksiddvkqvldkdsnfiigkitlpfkkewqrlyrewqnttikddyeflksffnvksitklhkkvrkdfslpistnEgkflvkrktwdnnfiyqilndsDSRadgtkpfipafdiskneiveaiidsftsknifwlpknielqkvdnknifaidtskwfevetpsdlrdigiatiqykidnnSRpkvrvkldyvidddskinyfmnhsllksRYpdkvleilkqstiiefessgfnktikemlgmklagi >5b2q_A: title=CRYSTAL STRUCTURE OF FRANCISELLA NOVICIDA CAS9 RHA IN COMPLEX WITH SGRNA AND TARGET DNA (TGG PAM) organism=FRANCISELLA TULARENSIS SUBSP. NOVICIDA U112 DNA sequence DT(D1):DA(C9) DG(D2):DC(C8) DG(D3):DC(C7) DT(D4):DA(C6) DA(D5):DT(C5) DT(D6):DA(C4) DC(D7):DG(C3) DG(D8):DC(C2) DG(D9):DC(C1) chainA (1074) ARG1241 1 0 0 0 0 0 0 0 0 (1305) ASP1472 9 0 0 0 0 0 0 0 0 (1306) SER1473 3 10 0 0 0 0 0 0 0 (1307) ARG1474 52 0 0 0 0 0 0 0 0 (1388) SER1555 0 0 5 0 0 0 0 0 0 (1418) ARG1585 9 14 2 0 0 0 0 0 0 (1419) TYR1586 3 0 0 0 0 0 0 0 0 prot.sequence mnfkilpiaidlgvkntgvfsafyqkgtslerldnkngkvyelskdsytllmnnrtarrhqrrgidrkqlvkrlfkliwteqlnlewdkdtqqaisflfnrrgfsfitdgysvkailmdifddyngeddsylklateqeskiseiynklmqkilefklmklctdikddtlkeitsyefelladylanyseslktqkfyniqeflkrhatindrildtlltddldiwnfnfelhhfvfavnkiksemasggrhrsqyfqeitnvldennhqegylknfcenlhnkkysnlsvknlvnlignlsnlelkplrkyfndkihakadhwdeqkftetychwilgewrvgvkdqdkkdgakysykdlcnelkqkvtkaglvdflleldpcrtippyldnnnrkppkcqslilnpkfldnqypnwqqylqelkklqsiqnyldsfetdlkvlksskdqpyfveykssnqqiasgqrdykdldarilqfifdrvkasdelllneiyfqakklkqesskkldeviansqlsqilksqhtngifeqgtflhlvckyykqrqrardsrlyimpeyrydkklhkynntgrfdddnqlltycnhkprqkryqllndlagvlqvspnflkdkigsdddlfiskwlvehirgfkkacedslkiqkdnrgllnhkiniarntkgkcekeifnlickiegykhglayelgvllfgepneaskpefdrkikkfnsiysfaqiqqiafaerkgnantcavcsadnahrmqqikiilsakaqrlpaiptrivdgavkkmatilaknivddnwqnikqvlsakhqlhipiitesnafefepaladvkgkslkdrrkkalerispenifkdknnrikefaeeldhiiprtlndeanlicvtgnrifclrdnyrsfinltpqeqkafrhalfladenpikqavirainnrnrtfvngtqryfaevlanniylrakkenlntdkisfdyfgiptigngrgiaeirqlyekvdsdiqayakgdkpqasyshlidamlafciaadehrndgsigleidknyslypdifsqikitdnefsdkklvrkkaiegfnthrqmtRdgiyaenylpilihkelnevrkgytwknseeikifkgkkydiqqlnnlvyclkfvdkpisidiqistleelrnilttnniaataeyyyinlktqklheyyienyntalgykkyskemeflrslayrsrrvkiksiddvkqvldkdsnfiigkitlpfkkewqrlyrewqnttikddyeflksffnvksitklhkkvrkdfslpistnhgKflvkrktwdnnfiyqilndsDSRadgtkpfipafdiskneiveaiidsftsknifwlpknielqkvdnknifaidtskwfevetpsdlrdigiatiqykidnnSapkvrvkldyvidddskinyfmnhsllksRYpdkvleilkqstiiefessgfnktikemlgmklagi >5b2r_B: title=CRYSTAL STRUCTURE OF THE STREPTOCOCCUS PYOGENES CAS9 VQR VARIANT IN COMPLEX WITH SGRNA AND TARGET DNA (TGA PAM) organism=Streptococcus pyogenes serotype M1 DNA sequence DC(C1):DG(D12) DA(C2):DT(D11) DA(C3):DT(D10) DT(C4):DA(D9) DC(C5):DG(D8) DT(C6):DA(D7) DC(C7):DG(D6) DA(C8):DT(D5) chainB (1065) LYS1107 0 0 0 0 0 0 6 5 (1177) GLU1219 0 0 0 0 0 2 3 0 (1286) ARG1333 0 0 0 0 0 4 11 17 (1288) GLN1335 0 0 0 0 0 10 4 0 (1290) ARG1337 0 0 0 4 12 20 0 0 prot.sequence kysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknrilylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnlfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkieefdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarnsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfvsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyepedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkQyRstkevldatlihqsitglyetridlsqlg >5b2s_B: title=CRYSTAL STRUCTURE OF THE STREPTOCOCCUS PYOGENES CAS9 EQR VARIANT IN COMPLEX WITH SGRNA AND TARGET DNA (TGAG PAM) organism=Streptococcus pyogenes serotype M1 DNA sequence DT(D5):DA(C8) DG(D6):DC(C7) DA(D7):DT(C6) DG(D8):DC(C5) DA(D9):DT(C4) DT(D10):DA(C3) DT(D11):DA(C2) DG(D12):DC(C1) chainB (1065) LYS1107 5 2 0 0 0 0 0 0 (1177) GLU1219 0 3 2 0 0 0 0 0 (1286) ARG1333 15 11 5 0 0 0 0 0 (1288) GLN1335 0 4 10 0 0 0 0 0 (1290) ARG1337 0 0 20 11 2 0 0 0 prot.sequence kysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknrilylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnlfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkieefdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarnsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfesptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyepedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkQyRstkevldatlihqsitglyetridlsqlg >5b2t_B: title=CRYSTAL STRUCTURE OF THE STREPTOCOCCUS PYOGENES CAS9 VRER VARIANT IN COMPLEX WITH SGRNA AND TARGET DNA (TGCG PAM) organism=Streptococcus pyogenes serotype M1 DNA sequence DC(C1):DG(D12) DA(C2):DT(D11) DA(C3):DT(D10) DT(C4):DA(D9) DC(C5):DG(D8) DG(C6):DC(D7) DC(C7):DG(D6) DA(C8):DT(D5) chainB (1071) LYS1107 0 0 0 0 0 0 6 5 (1183) GLU1219 0 0 0 0 0 2 2 0 (1293) ARG1333 0 0 0 0 0 5 11 15 (1295) GLU1335 0 0 0 0 0 9 3 0 (1297) ARG1337 0 0 0 2 11 17 0 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknrilylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkieefdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarnsrermkrieegikelgsqilkehpntqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdgkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfvsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasarElqkgnelalpskyvnflylashyekpedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkEyRstkevldatlihqsitglyetridlsqlg >5b31_A:Histone-fold; title=THE CRYSTAL STRUCTURE OF THE HETEROTYPIC H2AZ/H2A NUCLEOSOME WITH H3.1. organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger >5b31_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE CRYSTAL STRUCTURE OF THE HETEROTYPIC H2AZ/H2A NUCLEOSOME WITH H3.1. organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 65) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 6) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/srkesysiyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqTavrlllpgelakhavsegtkavtkytsa/pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/avsrsqraglqfpvgrihrhlksrttshgrvgataavysaaileyltaevlelagnaskdlkvkRitprhlqlairgdeeldslikatiagggviphihkslig/kesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5b32_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE CRYSTAL STRUCTURE OF THE HETEROTYPIC H2AZ/H2A NUCLEOSOME WITH H3.3. organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/avsrsqraglqfpvgrihrhlksrttShgrvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihkslig/kesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5b32_D:Histone-fold; title=THE CRYSTAL STRUCTURE OF THE HETEROTYPIC H2AZ/H2A NUCLEOSOME WITH H3.3. organism=HOMO SAPIENS DNA sequence DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5b33_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE CRYSTAL STRUCTURE OF THE H2AZ NUCLEOSOME WITH H3.3. organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/avsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksligk/rkesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/vsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkRitprhlqlairgdeeldslikatiagggviphihksligk/rkesysiyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqTavrlllpgelakhavsegtkavtkytsa >5b40_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE NUCLEOSOME STRUCTURE CONTAINING H2B-K120 AND H4-K31 MONOUBIQUITINATIONS organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I93):DA(J201) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 1) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 ( 9) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 25) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 1) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence YrpgtvalReirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/niqgitcpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/srkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa/YrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirgera/lrdniqgitcpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kesysiyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa >5b43_A: title=CRYSTAL STRUCTURE OF ACIDAMINOCOCCUS SP. CPF1 IN COMPLEX WITH CRRNA AND TARGET DNA organism=Acidaminococcus sp. BV3L6 DNA sequence DT(C1):DA(D-1) DA(C2):DT(D-2) DA(C3):DT(D-3) DA(C4):DT(D-4) DG(C5):DC(D-5) DG(C6):DC(D-6) DA(C7):DT(D-7) DC(C8):DG(D-8) DT(C9):DA(D-9) DG(C10):DC(D-10) chainA (164) THR167 0 0 1 2 0 0 0 0 0 0 (536) THR539 0 0 0 1 0 0 0 0 0 0 (545) LYS548 0 4 8 0 0 0 0 0 0 0 (596) PRO599 1 0 0 0 0 0 0 0 0 0 (600) LYS603 24 0 0 0 0 0 0 0 0 0 (601) MET604 3 4 0 0 0 0 0 0 0 0 (604) LYS607 4 10 7 3 0 0 0 0 0 0 prot.sequence mtqfegftnlyqvsktlrfelipqgktlkhiqeqgfieedkarndhykelkpiidriyktyadqclqlvqldwenlsaaidsyrkekteetrnalieeqatyrnaihdyfigrtdnltdainkrhaeiykglfkaelfngkvlkqltttehenallrsfdkftTyfsgfyenrknvfsaedistaiphrivqdnfpkfkenchiftrlitavpslrehfenvkkaigifvstsieevfsfpfynqlltqtqidlynqllggisreagtekikglnevlnlaiqkndetahiiaslphrfiplfkqilsdrntlsfileefksdeeviqsfckyktllrnenvletaealfnelnsidlthifishkkletissalcdhwdtlrnalyerriseltgkitksakekvqrslkhedinlqeiisaagkelseafkqktseilshahaaldqplpttlkkqeekeilksqldsllglyhlldwfavdesnevdpefsarltgiklemepslsfynkarnyatkkpysvekfklnfqmpTlaSgwdvnKeknNgailfvknglyylgimpkqkgrykalsfeptektsegfdkmyydyfPdaaKMipKcstqlkavtahfqthttpillsnnfiepleitkeiydlnnpekepkkfqtayakktgdqkgyrealckwidftrdflskytkttsidlsslrpssqykdlgeyyaelnpllyhisfqriaekeimdavetgklylfqiynkdfakghhgkpnlhtlywtglfspenlaktsiklngqaelfyrpksrmekmlnkklkdqktpipdtlyqelydyvnhrlshdlsdearallpnvitkevsheiikdrrftsdkfffhvpitlnyqaanspskfnqrvnaylkehpetpiigidrgernliyitvidstgkileqrslntiqqfdyqkkldnrekervaarqawsvvgtikdlkqgylsqviheivdlmihyqavvvlenlavyqqfekmlidklnclvlkdypaekvggvlnpyqltdqftsfakmgtqsgflfyvpapytskidpltgfvdpfvwktiknhesrkhflegfdflhydvktgdfilhfkmnrnlsfqrglpgfmpawdivfeknetqfdakgtpfiagkrivpyrdlypanelialleekgivfrdgsnilpkllenddshaidtmvalirsvlqmrnsnaatgedyinspvrdlngvcfdsrfqnpewpmdadangayhialkgqlllnhlkeskdlklqngisnqdwlayiqelrn >5b7j_A: title=STRUCTURE MODEL OF SAP1-DNA COMPLEX organism=? DNA sequence DC(B201):DG(C224) DA(B202):DT(C223) DA(B203):DT(C222) DA(B204):DT(C221) DA(B205):DT(C220) DC(B206):DG(C219) DA(B207):DT(C218) DA(B208):DT(C217) DT(B209):DA(C216) DA(B210):DT(C215) DT(B211):DA(C214) DT(B212):DA(C213) chainA ( 2) LYS26 0 3 8 9 3 0 0 0 0 0 0 0 ( 58) ARG82 0 0 0 0 0 0 0 0 0 3 0 0 ( 59) ASN83 0 0 0 0 0 0 3 17 6 0 0 0 ( 60) GLN84 0 0 0 0 0 0 5 0 0 0 0 0 ( 62) ILE86 0 0 0 0 0 0 0 2 6 0 0 0 ( 63) SER87 0 0 0 0 3 6 0 0 0 0 0 0 ( 66) ARG90 0 0 0 0 0 0 3 10 0 0 0 0 prot.sequence aKaqrthlsleekiklmrlvvrhkhelvdrktsefyakiarigyedeglaihtesacRNQiISimRvyeqrlahrqpgmkttpeedeldqlcdewkarlselqqyrekflv >5bk4_C:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF MCM2-7 DOUBLE HEXAMER ON DSDNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(O1):DT(S-1) DC(O2):DG(S-2) DT(O3):DA(S-3) DG(O4):DC(S-4) DA(O5):DT(S-5) DC(O6):DG(S-6) DT(O7):DA(S-7) DG(O8):DC(S-8) DA(O9):DT(S-9) DC(O10):DG(S-10) DT(O11):DA(S-11) DG(O12):DC(S-12) DA(O13):DT(S-13) DC(O14):DG(S-14) DT(O15):DA(S-15) DG(O16):DC(S-16) DA(O17):DT(S-17) DC(O18):DG(S-18) DT(O19):DA(S-19) DG(O20):DC(S-20) DA(O21):DT(S-21) DC(O22):DG(S-22) DT(O23):DA(S-23) DG(O24):DC(S-24) DA(O25):DT(S-25) DC(O26):DG(S-26) DT(O27):DA(S-27) DG(O28):DC(S-28) DA(O29):DT(S-29) DC(O30):DG(S-30) DT(O31):DA(S-31) DG(O32):DC(S-32) DA(O33):DT(S-33) DC(O34):DG(S-34) DT(O35):DA(S-35) DG(O36):DC(S-36) DA(O37):DT(S-37) DC(O38):DG(S-38) DT(O39):DA(S-39) DG(O40):DC(S-40) DA(O41):DT(S-41) DC(O42):DG(S-42) DT(O43):DA(S-43) DG(O44):DC(S-44) DA(O45):DT(S-45) DC(O46):DG(S-46) DT(O47):DA(S-47) DG(O48):DC(S-48) DA(O49):DT(S-49) DC(O50):DG(S-50) DT(O51):DA(S-51) DG(O52):DC(S-52) DA(O53):DT(S-53) DC(O54):DG(S-54) DT(O55):DA(S-55) DG(O56):DC(S-56) DA(O57):DT(S-57) DC(O58):DG(S-58) DT(O59):DA(S-59) DG(O60):DC(S-60) chainC (265) ARG449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lriiwgtnvsiqecttnfrnflmsfkykfrkilderdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransRqrvlkslyktyvdvvhvkvsdkrldvdtstieqelmqnkvdhneveevrqitdqdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktftkggryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitrdvdtkqlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledkpehisqddvlpvefltmyisyakehihpiiteaaktelvrayvgmrkmgdritattrqlesmirlaeahakmklknvveledvqeavrlirsaikdyat >5bmz_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PUTATIVE MARR FAMILY TRANSCRIPTIONAL REGULATOR HCAR FROM ACINETOBACTER SP. ADP COMPLEXED WITH 24MER DNA. organism=? DNA sequence DG(F-11):DC(E11) DA(F-10):DT(E10) DA(F-9):DT(E9) DT(F-8):DA(E8) DA(F-7):DT(E7) DT(F-6):DA(E6) DC(F-5):DG(E5) DA(F-4):DT(E4) DG(F-3):DC(E3) DT(F-2):DA(E2) DT(F-1):DA(E1) DA(F0):DA(E0) DA(F1):DT(E-1) DA(F2):DT(E-2) DC(F3):DG(E-3) DT(F4):DA(E-4) DG(F5):DC(E-5) DA(F6):DT(E-6) DT(F7):DA(E-7) DA(F8):DT(E-8) DT(F9):DA(E-9) DT(F10):DA(E-10) DC(F11):DG(E-11) chainA ( 49) ASN60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 59) LYS70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 60) PRO71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 61) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 7 10 0 0 0 0 0 ( 62) SER73 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 64) ASN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 ( 87) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 prot.sequence eeeprlsymiarvdriiskyltehlsaleislpqftalsvlaakpnlsNaklaersfiKPQSaNkilqdllangwiekapdpthgrRilvtvtpsgldklnqcnqvvqqleaqmlqgvdinlaflirnnlelmvknlst >5bmz_AB: title=CRYSTAL STRUCTURE OF PUTATIVE MARR FAMILY TRANSCRIPTIONAL REGULATOR HCAR FROM ACINETOBACTER SP. ADP COMPLEXED WITH 24MER DNA. organism=? DNA sequence DG(F-11):DC(E11) DA(F-10):DT(E10) DA(F-9):DT(E9) DT(F-8):DA(E8) DA(F-7):DT(E7) DT(F-6):DA(E6) DC(F-5):DG(E5) DA(F-4):DT(E4) DG(F-3):DC(E3) DT(F-2):DA(E2) DT(F-1):DA(E1) DA(F0):DA(E0) DA(F1):DT(E-1) DA(F2):DT(E-2) DC(F3):DG(E-3) DT(F4):DA(E-4) DG(F5):DC(E-5) DA(F6):DT(E-6) DT(F7):DA(E-7) DA(F8):DT(E-8) DT(F9):DA(E-9) DT(F10):DA(E-10) DC(F11):DG(E-11) chainA ( 49) ASN60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 59) LYS70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 60) PRO71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 61) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 7 10 0 0 0 0 0 ( 62) SER73 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 64) ASN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 ( 87) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 chainB ( 49) ASN60 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS70 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PRO71 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) GLN72 0 0 0 0 0 7 8 21 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) SER73 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ASN75 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS76 0 0 0 0 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG98 0 1 7 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eeeprlsymiarvdriiskyltehlsaleislpqftalsvlaakpnlsNaklaersfiKPQSaNkilqdllangwiekapdpthgrRilvtvtpsgldklnqcnqvvqqleaqmlqgvdinlaflirnnlelmvknlst/eeeprlsymiarvdriiskyltehlsaleislpqftalsvlaakpnlsNaklaersfiKPQSaNKilqdllangwiekapdpthgrRilvtvtpsgldklnqcnqvvqqleaqmlqgvdinlaflirnnlelmvknlst >5bmz_CD: title=CRYSTAL STRUCTURE OF PUTATIVE MARR FAMILY TRANSCRIPTIONAL REGULATOR HCAR FROM ACINETOBACTER SP. ADP COMPLEXED WITH 24MER DNA. organism=? DNA sequence DG(H-11):DC(G11) DA(H-10):DT(G10) DA(H-9):DT(G9) DT(H-8):DA(G8) DA(H-7):DT(G7) DT(H-6):DA(G6) DC(H-5):DG(G5) DA(H-4):DT(G4) DG(H-3):DC(G3) DT(H-2):DA(G2) DT(H-1):DA(G1) DA(H0):DA(G0) DA(H1):DT(G-1) DA(H2):DT(G-2) DC(H3):DG(G-3) DT(H4):DA(G-4) DG(H5):DC(G-5) DA(H6):DT(G-6) DT(H7):DA(G-7) DA(H8):DT(G-8) DT(H9):DA(G-9) DT(H10):DA(G-10) DC(H11):DG(G-11) chainC ( 49) ASN60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 60) PRO71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 61) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 15 6 4 0 0 0 0 0 ( 62) SER73 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 ( 64) ASN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 87) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 5 0 0 chainD ( 49) ASN60 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS70 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PRO71 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) GLN72 0 0 0 0 0 7 10 16 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) SER73 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS76 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG98 0 0 5 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eeeprlsymiarvdriiskyltehlsaleislpqftalsvlaakpnlsNaklaersfikPQSaNkilqdllangwiekapdpthgrRilvtvtpsgldklnqcnqvvqqleaqmlqgvdinlaflirnnlelmvknlst/eeeprlsymiarvdriiskyltehlsaleislpqftalsvlaakpnlsNaklaersfiKPQSanKilqdllangwiekapdpthgrRilvtvtpsgldklnqcnqvvqqleaqmlqgvdinlaflirnnlelmvknlst >5bng_B:Homeodomain-like; title=MONOMER OF TALE TYPE HOMEOBOX TRANSCRIPTION FACTOR MEIS1 COMPLEXES WITH SPECIFIC DNA organism=Homo sapiens DNA sequence DT(M4):DA(L35) DG(M5):DC(L34) DA(M6):DT(L33) DC(M7):DG(L32) DA(M8):DT(L31) DG(M9):DC(L30) DC(M10):DG(L29) DT(M11):DA(L28) DA(M12):DT(L27) DA(M13):DT(L26) chainB ( 43) ASN47 0 0 0 3 0 0 0 0 0 0 ( 46) ILE50 0 0 0 0 1 4 1 0 0 0 ( 47) ASN51 0 1 2 1 0 0 0 0 0 0 ( 50) ARG54 0 0 5 12 13 0 0 0 0 0 ( 51) ARG55 8 9 3 0 0 0 0 0 0 0 prot.sequence fpkvatnimrawlfqhlthpypseeqkkqlaqdtgltilqvnNwfINarRRivqpmidqs >5bol_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA TERNARY COMPLEX WITH A TEMPLATING 5CLC AND INCOMING DGTP ANALOG organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 34 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtvageplpvdsekdifdyiqwkyrepkdrse >5bom_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA BINARY COMPLEX WITH A TEMPLATING 5CLC organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 24) HIS34 0 0 0 0 40 ( 25) LYS35 0 0 0 0 9 ( 28) ALA38 0 0 0 0 4 prot.sequence lnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetkfmgvcqlpsdekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5box_A:"Winged_helix"_DNA-binding_domain;Phospholipase_D/nuclease; title=STRUCTURE OF TRMBL2, AN ARCHAEAL CHROMATIN PROTEIN, SHOWS A NOVEL MODE OF DNA BINDING. organism=Pyrococcus furiosus DNA sequence DG(F1):DC(E25) DT(F2):DA(E24) DA(F3):DT(E23) DG(F4):DC(E22) DT(F5):DA(E21) DA(F6):DT(E20) DT(F7):DA(E19) DC(F8):DG(E18) DA(F9):DT(E17) DC(F10):DG(E16) DT(F11):DA(E15) DA(F12):DT(E14) DT(F13):DA(E13) DC(F14):DG(E12) DG(F15):DC(E11) DA(F16):DT(E10) DT(F17):DA(E9) DG(F18):DC(E8) DA(F19):DT(E7) DT(F20):DA(E6) DA(F21):DT(E5) DC(F22):DG(E4) DT(F23):DA(E3) DA(F24):DT(E2) DC(F25):DG(E1) chainA ( 18) TYR19 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PRO45 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) PRO47 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG48 0 0 0 0 0 2 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR50 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYdvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietevpkygvervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaekv >5box_ABCD:"Winged_helix"_DNA-binding_domain;Phospholipase_D/nuclease; title=STRUCTURE OF TRMBL2, AN ARCHAEAL CHROMATIN PROTEIN, SHOWS A NOVEL MODE OF DNA BINDING. organism=Pyrococcus furiosus DNA sequence DG(F1):DC(E25) DT(F2):DA(E24) DA(F3):DT(E23) DG(F4):DC(E22) DT(F5):DA(E21) DA(F6):DT(E20) DT(F7):DA(E19) DC(F8):DG(E18) DA(F9):DT(E17) DC(F10):DG(E16) DT(F11):DA(E15) DA(F12):DT(E14) DT(F13):DA(E13) DC(F14):DG(E12) DG(F15):DC(E11) DA(F16):DT(E10) DT(F17):DA(E9) DG(F18):DC(E8) DA(F19):DT(E7) DT(F20):DA(E6) DA(F21):DT(E5) DC(F22):DG(E4) DT(F23):DA(E3) DA(F24):DT(E2) DC(F25):DG(E1) chainA ( 18) TYR19 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PRO45 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) PRO47 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG48 0 0 0 0 0 2 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR50 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 18) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 44) PRO45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 46) PRO47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 1 0 0 0 ( 47) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 4 0 0 0 0 0 ( 49) TYR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 chainC ( 18) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 44) PRO45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 46) PRO47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 ( 47) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 0 0 0 0 0 0 0 0 ( 49) TYR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 chainD ( 18) TYR19 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PRO45 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) PRO47 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG48 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR50 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYdvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietevpkygvervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaekv/skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYdvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietevpkygvervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaekv/skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYdvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietevpkygvervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaekv/skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYdvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietevpkygvervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaekv >5bpc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA TERNARY COMPLEX WITH A TEMPLATING 5CLC AND INCOMING DATP ANALOG organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 35 ( 26) LYS35 0 0 0 0 7 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpsekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirpageplpvdsekdifdyiqwkyrepkdrse >5bpd_A:"Winged_helix"_DNA-binding_domain;Phospholipase_D/nuclease; title=STRUCTURE OF TRMBL2, AN ARCHAEAL CHROMATIN PROTEIN, SHOWS A NOVEL MODE OF DNA BINDING. organism=PYROCOCCUS FURIOSUS DNA sequence DA(F2):DT(E20) DT(F3):DA(E19) DA(F4):DT(E18) DT(F5):DA(E17) DC(F6):DG(E16) DA(F7):DT(E15) DC(F8):DG(E14) DT(F9):DA(E13) DA(F10):DT(E12) DT(F11):DA(E11) DC(F12):DG(E10) DG(F13):DC(E9) DA(F14):DT(E8) DT(F15):DA(E7) DG(F16):DC(E6) DA(F17):DT(E5) DT(F18):DA(E4) DA(F19):DT(E3) DT(F20):DA(E2) DA(F21):DT(E1) chainA ( 18) TYR19 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PRO45 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) PRO47 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG48 0 0 4 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR50 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYDvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietevpkygvervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaekv >5bpd_ABCD:"Winged_helix"_DNA-binding_domain;Phospholipase_D/nuclease; title=STRUCTURE OF TRMBL2, AN ARCHAEAL CHROMATIN PROTEIN, SHOWS A NOVEL MODE OF DNA BINDING. organism=PYROCOCCUS FURIOSUS DNA sequence DA(F2):DT(E20) DT(F3):DA(E19) DA(F4):DT(E18) DT(F5):DA(E17) DC(F6):DG(E16) DA(F7):DT(E15) DC(F8):DG(E14) DT(F9):DA(E13) DA(F10):DT(E12) DT(F11):DA(E11) DC(F12):DG(E10) DG(F13):DC(E9) DA(F14):DT(E8) DT(F15):DA(E7) DG(F16):DC(E6) DA(F17):DT(E5) DT(F18):DA(E4) DA(F19):DT(E3) DT(F20):DA(E2) DA(F21):DT(E1) chainA ( 18) TYR19 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PRO45 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) PRO47 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG48 0 0 4 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR50 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 18) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 44) PRO45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 46) PRO47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 1 0 ( 47) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 15 4 0 0 0 ( 49) TYR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 chainC ( 18) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 ( 44) PRO45 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 46) PRO47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 ( 47) ARG48 0 0 0 0 0 0 0 0 0 0 0 1 0 2 1 0 0 0 0 0 ( 49) TYR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 chainD ( 19) TYR19 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PRO45 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) PRO47 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG48 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) TYR50 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYDvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietevpkygvervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaekv/skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYDvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietevpkygvervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaek/skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYdvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietevpvervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaekv/mskdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYdvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietekygvervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekae >5bpi_ABCD:"Winged_helix"_DNA-binding_domain;Phospholipase_D/nuclease; title=STRUCTURE OF TRMBL2, AN ARCHAEAL CHROMATIN PROTEIN, SHOWS A NOVEL MODE OF DNA BINDING. organism=PYROCOCCUS FURIOSUS DNA sequence DA(F2):DT(E20) DT(F3):DA(E19) DA(F4):DT(E18) DT(F5):DA(E17) DC(F6):DG(E16) DA(F7):DT(E15) DC(F8):DG(E14) DT(F9):DA(E13) DA(F10):DT(E12) DT(F11):DA(E11) DC(F12):DG(E10) DG(F13):DC(E9) DA(F14):DT(E8) DT(F15):DA(E7) DG(F16):DC(E6) DA(F17):DT(E5) DT(F18):DA(E4) DA(F19):DT(E3) DT(F20):DA(E2) DA(F21):DT(E1) chainA ( 18) TYR19 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PRO45 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) PRO47 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG48 0 0 2 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR50 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 18) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 44) PRO45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 46) PRO47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 5 0 0 ( 47) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 3 0 0 0 ( 49) TYR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 chainC ( 18) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 44) PRO45 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 46) PRO47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 ( 47) ARG48 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 ( 49) TYR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 chainD ( 18) TYR19 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PRO45 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) PRO47 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG48 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR50 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYdvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietevpkygvervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaekv/skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYdvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietevpkygvervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaekv/skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYdvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietevervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaekv/skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYdvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplieervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaekv >5bpi_C:"Winged_helix"_DNA-binding_domain;Phospholipase_D/nuclease; title=STRUCTURE OF TRMBL2, AN ARCHAEAL CHROMATIN PROTEIN, SHOWS A NOVEL MODE OF DNA BINDING. organism=PYROCOCCUS FURIOSUS DNA sequence DT(E1):DA(F21) DA(E2):DT(F20) DT(E3):DA(F19) DA(E4):DT(F18) DT(E5):DA(F17) DC(E6):DG(F16) DA(E7):DT(F15) DT(E8):DA(F14) DC(E9):DG(F13) DG(E10):DC(F12) DA(E11):DT(F11) DT(E12):DA(F10) DA(E13):DT(F9) DG(E14):DC(F8) DT(E15):DA(F7) DG(E16):DC(F6) DA(E17):DT(F5) DT(E18):DA(F4) DA(E19):DT(F3) DT(E20):DA(F2) chainC ( 18) TYR19 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PRO45 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) PRO47 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG48 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR50 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence skdrmvellqehfelnlYearayvalvafgvltpaelasvsevPaPRtYdvlrslekkgfamtqpgktnkyrpvhpanvlekfiqdwqervkeeleakkkakeellelmaplietevervwvvrgiknstlktkemleeaqneilladdgfiavnleddiikavdrgvktkilltknllprlkaskiidyakegklelraldkfdlpmlicdeevffaledlaaryfnyetqvwikdhrvvalfkekfneywekaekv >5bs8_A:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DT(E3):DA(F22) DC(E4):DG(F21) DA(E5):DT(F20) DT(E6):DA(F19) DG(E7):DC(F18) DA(E8):DT(F17) DA(E9):DT(F16) DT(E10):DA(F15) DG(E11):DC(F14) DA(E12):DT(F13) DC(E13):DG(F12) DT(E14):DA(F11) DA(E15):DT(F10) DT(E16):DA(F9) DG(E17):DC(F8) DC(E18):DG(F7) DA(E19):DT(F6) DC(E20):DG(F5) DG(E21):DC(F4) DT(E22):DA(F3) chainA ( 17) TYR31 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) SER91 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 21 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdaSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai >5bs8_ABCD:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DT(E3):DA(F22) DC(E4):DG(F21) DA(E5):DT(F20) DT(E6):DA(F19) DG(E7):DC(F18) DA(E8):DT(F17) DA(E9):DT(F16) DT(E10):DA(F15) DG(E11):DC(F14) DA(E12):DT(F13) DC(E13):DG(F12) DT(E14):DA(F11) DA(E15):DT(F10) DT(E16):DA(F9) DG(E17):DC(F8) DC(E18):DG(F7) DA(E19):DT(F6) DC(E20):DG(F5) DG(E21):DC(F4) DT(E22):DA(F3) chainA ( 17) TYR31 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) SER91 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 21 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 54) LYS484 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 chainC (114) ARG128 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 19 0 0 0 chainD ( 56) LYS484 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 0 prot.sequence iepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdaSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/alvrrkglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv/iepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdasiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/nalvrrksglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv >5bs8_D:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DT(E3):DA(F22) DC(E4):DG(F21) DA(E5):DT(F20) DT(E6):DA(F19) DG(E7):DC(F18) DA(E8):DT(F17) DA(E9):DT(F16) DT(E10):DA(F15) DG(E11):DC(F14) DA(E12):DT(F13) DC(E13):DG(F12) DT(E14):DA(F11) DA(E15):DT(F10) DT(E16):DA(F9) DG(E17):DC(F8) DC(E18):DG(F7) DA(E19):DT(F6) DC(E20):DG(F5) DG(E21):DC(F4) DT(E22):DA(F3) chainD ( 56) LYS484 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 0 prot.sequence nalvrrksglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv >5bt2_A:DNA-binding_domain; title=MECP2 MBD DOMAIN (A140V) IN COMPLEX WITH METHYLATED DNA organism=Homo sapiens DNA sequence DC(B2):DG(C40) DT(B3):DA(C39) DG(B4):DC(C38) DG(B5):DC(C37) DA(B6):DT(C36) DA(B7):DT(C35) 5CM(B8):DG(C34) DG(B9):5CM(C33) DG(B10):DC(C32) DA(B11):DT(C31) DA(B12):DT(C30) DT(B13):DA(C29) DT(B14):DA(C28) DC(B15):DG(C27) DT(B16):DA(C26) DT(B17):DA(C25) DC(B18):DG(C24) DT(B19):DA(C23) DA(B20):DT(C22) chainA ( 20) ARG111 0 0 0 0 0 0 16 13 3 0 0 0 0 0 0 0 0 0 0 ( 30) ASP121 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 ( 32) TYR123 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG133 0 0 0 0 0 4 13 20 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gpmyddptlpegwtrklkqRksgrSagkyDvYlinpqgkafRskvelivyfekvgdtsldpndfdftvtgr >5bta_ABCD:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DA(F3):DT(E22) DC(F4):DG(E21) DG(F5):DC(E20) DT(F6):DA(E19) DG(F7):DC(E18) DC(F8):DG(E17) DA(F9):DT(E16) DT(F10):DA(E15) DA(F11):DT(E14) DG(F12):DC(E13) DT(F13):DA(E12) DC(F14):DG(E11) DA(F15):DT(E10) DT(F16):DA(E9) DT(F17):DA(E8) DC(F18):DG(E7) DA(F19):DT(E6) DT(F20):DA(E5) DG(F21):DC(E4) DA(F22):DT(E3) chainA ( 17) TYR31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) SER91 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 21 0 0 0 chainB ( 54) LYS484 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 chainC ( 77) SER91 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 20 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 56) LYS484 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdSSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/alvrrkglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv/iepvdieqemqrsyidyamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdsSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/nalvrrksglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv >5bta_C:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DA(F3):DT(E22) DC(F4):DG(E21) DG(F5):DC(E20) DT(F6):DA(E19) DG(F7):DC(E18) DC(F8):DG(E17) DA(F9):DT(E16) DT(F10):DA(E15) DA(F11):DT(E14) DG(F12):DC(E13) DT(F13):DA(E12) DC(F14):DG(E11) DA(F15):DT(E10) DT(F16):DA(E9) DT(F17):DA(E8) DC(F18):DG(E7) DA(F19):DT(E6) DT(F20):DA(E5) DG(F21):DC(E4) DA(F22):DT(E3) chainC ( 77) SER91 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 20 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iepvdieqemqrsyidyamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdsSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai >5btc_ABCD:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DT(E3):DA(F22) DC(E4):DG(F21) DA(E5):DT(F20) DT(E6):DA(F19) DG(E7):DC(F18) DA(E8):DT(F17) DA(E9):DT(F16) DT(E10):DA(F15) DG(E11):DC(F14) DA(E12):DT(F13) DC(E13):DG(F12) DT(E14):DA(F11) DA(E15):DT(F10) DT(E16):DA(F9) DG(E17):DC(F8) DC(E18):DG(F7) DA(E19):DT(F6) DC(E20):DG(F5) DG(E21):DC(F4) DT(E22):DA(F3) chainA ( 77) SER91 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 18 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 54) LYS484 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 76) SER90 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 77) SER91 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 16 0 0 0 chainD ( 56) LYS484 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 prot.sequence iepvdieqemqrsyidyamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdSSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/alvrrkglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv/iepvdieqemqrsyidYamsvivgralpevrdglKpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdSSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/nalvrrksglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv >5btc_B:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DA(F3):DT(E22) DC(F4):DG(E21) DG(F5):DC(E20) DT(F6):DA(E19) DG(F7):DC(E18) DC(F8):DG(E17) DA(F9):DT(E16) DT(F10):DA(E15) DA(F11):DT(E14) DG(F12):DC(E13) DT(F13):DA(E12) DC(F14):DG(E11) DA(F15):DT(E10) DT(F16):DA(E9) DT(F17):DA(E8) DC(F18):DG(E7) DA(F19):DT(E6) DT(F20):DA(E5) DG(F21):DC(E4) DA(F22):DT(E3) chainB ( 54) LYS484 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 prot.sequence alvrrkglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv >5btd_A:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DT(E3):DA(F22) DC(E4):DG(F21) DA(E5):DT(F20) DT(E6):DA(F19) DG(E7):DC(F18) DA(E8):DT(F17) DA(E9):DT(F16) DT(E10):DA(F15) DG(E11):DC(F14) DA(E12):DT(F13) DC(E13):DG(F12) DT(E14):DA(F11) DA(E15):DT(F10) DT(E16):DA(F9) DG(E17):DC(F8) DC(E18):DG(F7) DA(E19):DT(F6) DC(E20):DG(F5) DG(E21):DC(F4) DT(E22):DA(F3) chainA ( 77) SER91 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 16 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdaSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai >5btd_ABCD:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DA(F3):DT(E22) DC(F4):DG(E21) DG(F5):DC(E20) DT(F6):DA(E19) DG(F7):DC(E18) DC(F8):DG(E17) DA(F9):DT(E16) DT(F10):DA(E15) DA(F11):DT(E14) DG(F12):DC(E13) DT(F13):DA(E12) DC(F14):DG(E11) DA(F15):DT(E10) DT(F16):DA(E9) DT(F17):DA(E8) DC(F18):DG(E7) DA(F19):DT(E6) DT(F20):DA(E5) DG(F21):DC(E4) DA(F22):DT(E3) chainA ( 77) SER91 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 16 0 0 0 chainB ( 54) LYS484 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 chainC ( 77) SER91 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 15 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 56) LYS484 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdaSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/alvrrkglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv/iepvdieqemqrsyidyamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdaSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/nalvrrksglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv >5btf_A:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DA(F3):DT(E22) DC(F4):DG(E21) DG(F5):DC(E20) DT(F6):DA(E19) DG(F7):DC(E18) DC(F8):DG(E17) DA(F9):DT(E16) DT(F10):DA(E15) DA(F11):DT(E14) DG(F12):DC(E13) DT(F13):DA(E12) DC(F14):DG(E11) DA(F15):DT(E10) DT(F16):DA(E9) DT(F17):DA(E8) DC(F18):DG(E7) DA(F19):DT(E6) DT(F20):DA(E5) DG(F21):DC(E4) DA(F22):DT(E3) chainA ( 76) SER90 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 77) SER91 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 0 0 0 prot.sequence iepvdieqemqrsyidyamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdSSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai >5btf_ABCD:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DT(E3):DA(F22) DC(E4):DG(F21) DA(E5):DT(F20) DT(E6):DA(F19) DG(E7):DC(F18) DA(E8):DT(F17) DA(E9):DT(F16) DT(E10):DA(F15) DG(E11):DC(F14) DA(E12):DT(F13) DC(E13):DG(F12) DT(E14):DA(F11) DA(E15):DT(F10) DT(E16):DA(F9) DG(E17):DC(F8) DC(E18):DG(F7) DA(E19):DT(F6) DC(E20):DG(F5) DG(E21):DC(F4) DT(E22):DA(F3) chainA ( 76) SER90 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 77) SER91 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 15 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 54) LYS484 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 76) SER90 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 77) SER91 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 20 0 0 0 chainD ( 56) LYS484 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 prot.sequence iepvdieqemqrsyidyamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdSSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/alvrrkglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv/iepvdieqemqrsyidyamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdSSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/nalvrrksglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv >5btg_ABCD:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DT(E3):DA(F22) DC(E4):DG(F21) DA(E5):DT(F20) DT(E6):DA(F19) DG(E7):DC(F18) DA(E8):DT(F17) DA(E9):DT(F16) DT(E10):DA(F15) DG(E11):DC(F14) DA(E12):DT(F13) DC(E13):DG(F12) DT(E14):DA(F11) DA(E15):DT(F10) DT(E16):DA(F9) DG(E17):DC(F8) DC(E18):DG(F7) DA(E19):DT(F6) DC(E20):DG(F5) DG(E21):DC(F4) DT(E22):DA(F3) chainA ( 77) SER91 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 18 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 54) LYS484 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 77) SER91 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 18 0 0 0 chainD ( 56) LYS484 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 prot.sequence iepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdaSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/alvrrkglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv/iepvdieqemqrsyidyamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdaSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/nalvrrksglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv >5btg_D:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DA(F3):DT(E22) DC(F4):DG(E21) DG(F5):DC(E20) DT(F6):DA(E19) DG(F7):DC(E18) DC(F8):DG(E17) DA(F9):DT(E16) DT(F10):DA(E15) DA(F11):DT(E14) DG(F12):DC(E13) DT(F13):DA(E12) DC(F14):DG(E11) DA(F15):DT(E10) DT(F16):DA(E9) DT(F17):DA(E8) DC(F18):DG(E7) DA(F19):DT(E6) DT(F20):DA(E5) DG(F21):DC(E4) DA(F22):DT(E3) chainD ( 56) LYS484 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nalvrrksglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv >5bti_A:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DT(E3):DA(F22) DC(E4):DG(F21) DA(E5):DT(F20) DT(E6):DA(F19) DG(E7):DC(F18) DA(E8):DT(F17) DA(E9):DT(F16) DT(E10):DA(F15) DG(E11):DC(F14) DA(E12):DT(F13) DC(E13):DG(F12) DT(E14):DA(F11) DA(E15):DT(F10) DT(E16):DA(F9) DG(E17):DC(F8) DC(E18):DG(F7) DA(E19):DT(F6) DC(E20):DG(F5) DG(E21):DC(F4) DT(E22):DA(F3) chainA ( 76) SER90 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 77) SER91 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 20 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdSSiydslvrmaqpwslryplvdgqgnfgspgndppaamrtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai >5bti_ABCD:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DT(E3):DA(F22) DC(E4):DG(F21) DA(E5):DT(F20) DT(E6):DA(F19) DG(E7):DC(F18) DA(E8):DT(F17) DA(E9):DT(F16) DT(E10):DA(F15) DG(E11):DC(F14) DA(E12):DT(F13) DC(E13):DG(F12) DT(E14):DA(F11) DA(E15):DT(F10) DT(E16):DA(F9) DG(E17):DC(F8) DC(E18):DG(F7) DA(E19):DT(F6) DC(E20):DG(F5) DG(E21):DC(F4) DT(E22):DA(F3) chainA ( 76) SER90 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 77) SER91 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 20 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 54) LYS484 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 77) SER91 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (166) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 19 0 0 0 chainD ( 56) LYS484 0 0 0 0 0 0 0 0 0 0 0 0 1 7 2 0 0 0 0 0 prot.sequence iepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdSSiydslvrmaqpwslryplvdgqgnfgspgndppaamrtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/alvrrkglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv/iepvdieqemqrsyidyamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdsSiydslvrmaqpwslryplvdgqgnfgspgndppaamrtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/nalvrrksglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv >5btl_A:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DT(E3):DA(F22) DC(E4):DG(F21) DA(E5):DT(F20) DT(E6):DA(F19) DG(E7):DC(F18) DA(E8):DT(F17) DA(E9):DT(F16) DT(E10):DA(F15) DG(E11):DC(F14) DA(E12):DT(F13) DC(E13):DG(F12) DT(E14):DA(F11) DA(E15):DT(F10) DT(E16):DA(F9) DG(E17):DC(F8) DC(E18):DG(F7) DA(E19):DT(F6) DC(E20):DG(F5) DG(E21):DC(F4) DT(E22):DA(F3) chainA ( 77) SER91 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 15 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdaSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai >5btl_ABCD:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DA(F3):DT(E22) DC(F4):DG(E21) DG(F5):DC(E20) DT(F6):DA(E19) DG(F7):DC(E18) DC(F8):DG(E17) DA(F9):DT(E16) DT(F10):DA(E15) DA(F11):DT(E14) DG(F12):DC(E13) DT(F13):DA(E12) DC(F14):DG(E11) DA(F15):DT(E10) DT(F16):DA(E9) DT(F17):DA(E8) DC(F18):DG(E7) DA(F19):DT(E6) DT(F20):DA(E5) DG(F21):DC(E4) DA(F22):DT(E3) chainA ( 77) SER91 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 0 0 0 chainB ( 54) LYS484 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 chainC ( 77) SER91 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 21 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 56) LYS484 0 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdaSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/alvrrkglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv/iepvdieqemqrsyidyamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdaSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/nalvrrksglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv >5btn_A:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DT(E3):DA(F22) DC(E4):DG(F21) DA(E5):DT(F20) DT(E6):DA(F19) DG(E7):DC(F18) DA(E8):DT(F17) DA(E9):DT(F16) DT(E10):DA(F15) DG(E11):DC(F14) DA(E12):DT(F13) DC(E13):DG(F12) DT(E14):DA(F11) DA(E15):DT(F10) DT(E16):DA(F9) DG(E17):DC(F8) DC(E18):DG(F7) DA(E19):DT(F6) DC(E20):DG(F5) DG(E21):DC(F4) DT(E22):DA(F3) chainA ( 17) TYR31 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) SER90 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 77) SER91 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 (166) ILE181 0 0 0 15 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdSSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai >5btn_ABCD:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF A TOPOISOMERASE II COMPLEX organism=? DNA sequence DA(F3):DT(E22) DC(F4):DG(E21) DG(F5):DC(E20) DT(F6):DA(E19) DG(F7):DC(E18) DC(F8):DG(E17) DA(F9):DT(E16) DT(F10):DA(E15) DA(F11):DT(E14) DG(F12):DC(E13) DT(F13):DA(E12) DC(F14):DG(E11) DA(F15):DT(E10) DT(F16):DA(E9) DT(F17):DA(E8) DC(F18):DG(E7) DA(F19):DT(E6) DT(F20):DA(E5) DG(F21):DC(E4) DA(F22):DT(E3) chainA ( 17) TYR31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 76) SER90 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 77) SER91 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 0 0 0 chainB ( 54) LYS484 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 chainC (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (166) ILE181 0 0 0 17 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 56) LYS484 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdSSiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/alvrrkglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv/iepvdieqemqrsyidyamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdssiydslvrmaqpwslryplvdgqgnfgspgndppaamRtearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiai/nalvrrksglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplrgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv >5byg_AB:Origin_of_replication-binding_domain,_RBD-like; title=X-RAY STRUCTURE OF AAV2 OBD-AAVS1 COMPLEX 2:1 organism=Adeno-associated virus 2 DNA sequence DT(E2):DA(F42) DC(E3):DG(F41) DG(E4):DC(F40) DG(E5):DC(F39) DC(E6):DG(F38) DG(E7):DC(F37) DC(E8):DG(F36) DT(E9):DA(F35) DC(E10):DG(F34) DG(E11):DC(F33) DC(E12):DG(F32) DT(E13):DA(F31) DC(E14):DG(F30) DG(E15):DC(F29) DC(E16):DG(F28) DT(E17):DA(F27) DC(E18):DG(F26) DG(E19):DC(F25) DC(E20):DG(F24) DT(E21):DA(F23) chainA ( 83) MET103 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 ( 87) ARG107 0 0 0 0 0 0 0 0 0 0 0 4 8 6 0 0 0 0 0 0 (118) ARG138 0 0 0 0 5 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) ALA141 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 97) MET103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (101) ARG107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 (132) ARG138 0 0 0 0 0 0 0 0 6 8 9 1 0 0 0 0 0 0 0 0 (135) ALA141 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence mpgfyeivikvpsewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngAgggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthvsqtqe/mpgfyeivikvpsdgisdsfvnwvaekewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngAgggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthvsqtqeqnkenq >5byg_CD:Origin_of_replication-binding_domain,_RBD-like; title=X-RAY STRUCTURE OF AAV2 OBD-AAVS1 COMPLEX 2:1 organism=Adeno-associated virus 2 DNA sequence DA(H23):DT(G21) DG(H24):DC(G20) DC(H25):DG(G19) DG(H26):DC(G18) DA(H27):DT(G17) DG(H28):DC(G16) DC(H29):DG(G15) DG(H30):DC(G14) DA(H31):DT(G13) DG(H32):DC(G12) DC(H33):DG(G11) DG(H34):DC(G10) DA(H35):DT(G9) DG(H36):DC(G8) DC(H37):DG(G7) DG(H38):DC(G6) DC(H39):DG(G5) DC(H40):DG(G4) DG(H41):DC(G3) DA(H42):DT(G2) chainC ( 96) MET103 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ARG107 0 0 4 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG138 0 0 0 0 0 0 0 0 0 4 14 5 0 0 0 0 0 0 0 0 (134) ALA141 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainD ( 76) MET103 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 ( 80) ARG107 0 0 0 0 0 0 3 9 4 0 0 0 0 0 0 0 0 0 0 0 (111) ARG138 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 9 0 0 0 0 prot.sequence mpgfyeivikvpsgisdsfvnwvaekewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngAgggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthvsqtq/mpgfyeivikppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngagggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthvsqtqeqnkenq >5byg_D:Origin_of_replication-binding_domain,_RBD-like; title=X-RAY STRUCTURE OF AAV2 OBD-AAVS1 COMPLEX 2:1 organism=Adeno-associated virus 2 DNA sequence DT(G2):DA(H42) DC(G3):DG(H41) DG(G4):DC(H40) DG(G5):DC(H39) DC(G6):DG(H38) DG(G7):DC(H37) DC(G8):DG(H36) DT(G9):DA(H35) DC(G10):DG(H34) DG(G11):DC(H33) DC(G12):DG(H32) DT(G13):DA(H31) DC(G14):DG(H30) DG(G15):DC(H29) DC(G16):DG(H28) DT(G17):DA(H27) DC(G18):DG(H26) DG(G19):DC(H25) DC(G20):DG(H24) DT(G21):DA(H23) chainD ( 76) MET103 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 ( 80) ARG107 0 0 0 0 0 0 0 0 0 0 0 4 9 3 0 0 0 0 0 0 (111) ARG138 0 0 0 0 9 14 8 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mpgfyeivikppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngagggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthvsqtqeqnkenq >5c3e_ABE: title=CRYSTAL STRUCTURE OF A TRANSCRIBING RNA POLYMERASE II COMPLEX REVEALS A COMPLETE TRANSCRIPTION BUBBLE organism=? DNA sequence DT(U2):DA(S37) DA(U3):DT(S36) DC(U5):DG(S34) DA(U7):DT(S32) DT(U8):DA(S31) DA(U9):DT(S30) DA(U10):DT(S29) DG(U11):DC(S28) DC(U12):DG(S27) chainA (141) LYS143 0 0 0 0 0 1 0 0 0 chainB chainE prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdeqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkym/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidvpgrelkyeliasesgkvfigrlpimlrSkncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygrssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveeahdfnmklainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrdgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeakrirattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpiseelgqrtayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf/dqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvVnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >5c4a_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF A TRANSCRIBING RNA POLYMERASE II COMPLEX REVEALS A COMPLETE TRANSCRIPTION BUBBLE organism=? DNA sequence DC(U0):DG(S39) DC(U1):DG(S38) DT(U2):DA(S37) DA(U3):DT(S36) DC(U4):DG(S35) DC(U5):DG(S34) DG(U6):DC(S33) DA(U7):DT(S32) DT(U8):DA(S31) DA(U9):DT(S30) DA(U10):DT(S29) DG(U11):DC(S28) DT(U12):DA(S27) DA(U13):DT(S26) DC(U14):DG(S25) chainA (142) LYS143 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkym >5c4a_AE: title=CRYSTAL STRUCTURE OF A TRANSCRIBING RNA POLYMERASE II COMPLEX REVEALS A COMPLETE TRANSCRIPTION BUBBLE organism=? DNA sequence DG(S25):DC(U14) DT(S26):DA(U13) DA(S27):DT(U12) DC(S28):DG(U11) DT(S29):DA(U10) DT(S30):DA(U9) DA(S31):DT(U8) DT(S32):DA(U7) DC(S33):DG(U6) DG(S34):DC(U5) DG(S35):DC(U4) DT(S36):DA(U3) DA(S37):DT(U2) DG(S38):DC(U1) DG(S39):DC(U0) chainA (142) LYS143 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainE prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkym/dqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvNithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >5c4j_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF A TRANSCRIBING RNA POLYMERASE II COMPLEX REVEALS A COMPLETE TRANSCRIPTION BUBBLE organism=? DNA sequence DG(S2):DC(U39) DA(S3):DT(U38) DG(S4):DC(U37) DT(S5):DA(U36) DC(S6):DG(U35) DC(S7):DG(U34) DG(S8):DC(U33) DG(S10):DC(U31) DG(S11):DC(U30) DA(S12):DA(U29) DA(S13):DA(U28) DG(S14):DG(U27) DC(S15):DC(U26) DT(S16):DT(U25) DC(S17):DC(U24) DT(S18):DT(U23) DC(S19):DC(U22) DC(S20):DC(U21) DT(S21):DT(U20) DA(S22):DA(U19) DG(S23):DG(U18) DC(S24):DC(U17) DA(S25):DA(U16) DG(S26):DA(U14) DG(S28):DC(U13) DC(S29):DG(U12) DT(S30):DA(U11) DT(S31):DA(U10) DA(S32):DT(U9) DT(S33):DA(U8) DC(S34):DG(U7) DG(S35):DC(U6) DG(S36):DC(U5) DT(S37):DA(U4) DA(S38):DT(U3) chainA (134) LYS143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (306) LEU315 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) LYS317 0 0 0 0 0 0 0 0 46 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) SER318 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) PRO448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) VAL829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (822) THR831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (823) ALA832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (827) TYR836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (1365) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 (1382) GLU1403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakrfpetmdekigglndprlgsidrnlkcqtcqegmnecpghfgdlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqaLqKSgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtaVkTAetgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfEetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvky >5c4j_ABE: title=CRYSTAL STRUCTURE OF A TRANSCRIBING RNA POLYMERASE II COMPLEX REVEALS A COMPLETE TRANSCRIPTION BUBBLE organism=? DNA sequence DG(S2):DC(U39) DA(S3):DT(U38) DG(S4):DC(U37) DT(S5):DA(U36) DC(S6):DG(U35) DC(S7):DG(U34) DG(S8):DC(U33) DG(S10):DC(U31) DG(S11):DC(U30) DA(S12):DA(U29) DA(S13):DA(U28) DG(S14):DG(U27) DC(S15):DC(U26) DT(S16):DT(U25) DC(S17):DC(U24) DT(S18):DT(U23) DC(S19):DC(U22) DC(S20):DC(U21) DT(S21):DT(U20) DA(S22):DA(U19) DG(S23):DG(U18) DC(S24):DC(U17) DA(S25):DA(U16) DG(S26):DA(U14) DG(S28):DC(U13) DC(S29):DG(U12) DT(S30):DA(U11) DT(S31):DA(U10) DA(S32):DT(U9) DT(S33):DA(U8) DC(S34):DG(U7) DG(S35):DC(U6) DG(S36):DC(U5) DT(S37):DA(U4) DA(S38):DT(U3) chainA (134) LYS143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (306) LEU315 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) LYS317 0 0 0 0 0 0 0 0 46 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) SER318 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) PRO448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) VAL829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (822) THR831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (823) ALA832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (827) TYR836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (1365) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 (1382) GLU1403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (203) LYS228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) PHE250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) SER252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) LYS257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) PRO274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) TYR275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) GLU359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) ARG398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (431) LYS470 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (432) LYS471 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (463) ILE502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (465) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (466) ASP505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) LYS507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakrfpetmdekigglndprlgsidrnlkcqtcqegmnecpghfgdlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqaLqKSgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtaVkTAetgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfEetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvky/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhttesdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidvpgrelkyeliaeesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkKaapspishvaeiRsalekgsrFiStlqvKlygregssartikatlPYikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfiiqyakdilqkEflphitqlegfesrkafflgyminrlllcaldrkdqddRdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveeahdfnmklainaktitsglkyalatgnwgeqKKamssragvsqvlnrytysstlshlrrtntpIgRDgKlakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwsslneglveyidaeeeesiliamqpedlepaeakrirattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpispdeeeltayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf/enernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsGryasyricm >5c4x_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF A TRANSCRIBING RNA POLYMERASE II COMPLEX REVEALS A COMPLETE TRANSCRIPTION BUBBLE organism=? DNA sequence DG(S1):DC(U39) DG(S2):DC(U38) DA(S3):DT(U37) DG(S4):DC(U36) DT(S5):DA(U35) DC(S6):DG(U34) DC(S7):DG(U33) DG(S8):DC(U32) DT(S9):DA(U31) DG(S10):DC(U30) DG(S11):DC(U29) DA(S12):DG(U26) DA(S13):DC(U25) DG(S14):DT(U24) DC(S15):DC(U23) DT(S16):DT(U22) DA(S17):DC(U21) DT(S18):DC(U20) DC(S19):DT(U19) DA(S21):DA(U18) DG(S22):DG(U17) DC(S23):DC(U16) DA(S24):DA(U15) DG(S25):DG(U14) DT(S26):DA(U13) DG(S27):DC(U12) DC(S28):DG(U11) DT(S29):DA(U10) DT(S30):DA(U9) DA(S31):DT(U8) DT(S32):DA(U7) DC(S33):DG(U6) DG(S34):DC(U5) DG(S35):DC(U4) DT(S36):DA(U3) DA(S37):DT(U2) DG(S38):DC(U1) DG(S39):DC(U0) chainA (298) HIS299 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) LEU315 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) GLN316 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) LYS317 0 0 0 0 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (349) ARG350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) GLN447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) PRO448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1368) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfHvatymdndiagqpqaLQKsgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkym >5c4x_ABE: title=CRYSTAL STRUCTURE OF A TRANSCRIBING RNA POLYMERASE II COMPLEX REVEALS A COMPLETE TRANSCRIPTION BUBBLE organism=? DNA sequence DC(U0):DG(S39) DC(U1):DG(S38) DT(U2):DA(S37) DA(U3):DT(S36) DC(U4):DG(S35) DC(U5):DG(S34) DG(U6):DC(S33) DA(U7):DT(S32) DT(U8):DA(S31) DA(U9):DT(S30) DA(U10):DT(S29) DG(U11):DC(S28) DC(U12):DG(S27) DA(U15):DT(S26) DC(U16):DG(S25) DG(U17):DA(S24) DA(U18):DC(S23) DT(U19):DG(S22) DC(U20):DA(S21) DC(U21):DC(S19) DT(U22):DT(S18) DC(U23):DA(S17) DT(U24):DT(S16) DC(U25):DC(S15) DG(U26):DG(S14) DA(U27):DA(S13) DA(U28):DA(S12) DC(U29):DG(S11) DC(U30):DG(S10) DA(U31):DT(S9) DC(U32):DG(S8) DG(U33):DC(S7) DG(U34):DC(S6) DA(U35):DT(S5) DC(U36):DG(S4) DT(U37):DA(S3) DC(U38):DG(S2) DC(U39):DG(S1) chainA (298) HIS299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (314) LEU315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 (315) GLN316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (316) LYS317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 (349) ARG350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) GLN447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) PRO448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1368) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (247) TYR275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) ARG337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) ASP505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (480) LEU508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) LYS510 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) GLN531 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfHvatymdndiagqpqaLQKsgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkym/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhttesdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidvpgrelkyelidsesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygrssartiatlpYikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrRgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveeahdfnmklainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrDgkLaKprqlhnthwglvcpaetpegQacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeakrirattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpispdeeelgqrtayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf/dqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >5c51_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PROBING THE STRUCTURAL AND MOLECULAR BASIS OF NUCLEOTIDE SELECTIVITY BY HUMAN MITOCHONDRIAL DNA POLYMERASE GAMMA organism=HOMO SAPIENS DNA sequence DA(P4):DT(T25) DA(P5):DT(T24) DA(P6):DT(T23) DC(P7):DG(T22) DG(P8):DC(T21) DA(P9):DT(T20) DG(P10):DC(T19) DG(P11):DC(T18) DG(P12):DC(T17) DC(P13):DG(T16) DC(P14):DG(T15) DA(P15):DT(T14) DG(P16):DC(T13) DT(P17):DA(T12) DG(P18):DC(T11) DC(P19):DG(T10) DC(P20):DG(T9) DG(P21):DT(T8) DT(P22):DA(T7) DA(P23):DT(T6) DOC(P24):DG(T5) chainA (590) ASN803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (640) ARG853 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (648) THR861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 (735) ARG948 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 (853) ASN1098 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (857) GLN1102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (889) HIS1134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mlsrglheqifgqggempgeaavrrsvehlqkhglwgqpavplpdvelrlpplygdnldqhfrllaqkqslpyleaanlllqaqlppkppawawaegwtrygpegeavpvaipeeralvfdvevclaegtcptlavaispsawyswcsqrlveeryswtsqlspadliplevqeqlvvghnvsfdrahireqyliqgsrmrfldtmsmhmaisglssfqrslwiaakaisswdwldissvnslaevhrlyvggpplekeprelfvkgtmkdirenfqdlmqycaqdvwathevfqqqlplflercphpvtlagmlemgvsylpvnqnwerylaeaqgtyeelqremkkslmdlandacqllsgerykedpwlwdlewdlqefkqkkakkvkkepatalgpcseeeefqqdvmaraclqklkgttellpkrpqhlpghpgwyrklcprlddpawtpgpsllslqmrvtpklmaltwdgfplhyserhgwgylnlaklptgttlesagvvcpyraieslyrkhclepyndvdipgcwffklphkdgnscnvgspfakdflpkmedgtlqagpggasgpraleinkmisfwrNahkrissqmvvwlprsalpravirhpdydeeglygailpqvvtagtitrRaveptwlTasnarpdrvgselkamvqappgytlvgadvdsqelwiaavlgdahfagmhgctafgwmtlqgrksrgtdlhsktattvgisrehakRfnygriygagqpfaerllmqfnhrltqqeaaekaqqmyaatkgllrkvqretarksqwkkwevvaerawkggtesemfnklesiatsdiprtpvlgccisralepsavqeefmtsrvNwvvQssavdylhlmlvamkwlfeefaidgrfcisihdevrylvreedryraalalqitnlltrcmfayklglndlpqsvaffsavdidrclrkevtmdcktpsnptgmerrygipqgealdiyqiieltk >5c52_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PROBING THE STRUCTURAL AND MOLECULAR BASIS OF NUCLEOTIDE SELECTIVITY BY HUMAN MITOCHONDRIAL DNA POLYMERASE GAMMA organism=HOMO SAPIENS DNA sequence DA(T5):DOC(P24) DT(T6):DA(P23) DA(T7):DT(P22) DC(T8):DG(P21) DG(T9):DC(P20) DG(T10):DC(P19) DC(T11):DG(P18) DA(T12):DT(P17) DC(T13):DG(P16) DT(T14):DA(P15) DG(T15):DC(P14) DG(T16):DC(P13) DC(T17):DG(P12) DC(T18):DG(P11) DC(T19):DG(P10) DT(T20):DA(P9) DC(T21):DG(P8) DG(T22):DC(P7) DT(T23):DA(P6) chainA (590) ASN803 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (640) ARG853 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (648) THR861 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (853) ASN1098 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (857) GLN1102 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlsrglheqifgqggempgeaavrrsvehlqkhglwgqpavplpdvelrlpplygdnldqhfrllaqkqslpyleaanlllqaqlppkppawawaegwtrygpegeavpvaipeeralvfdvevclaegtcptlavaispsawyswcsqrlveeryswtsqlspadliplevqeqlvvghnvsfdrahireqyliqgsrmrfldtmsmhmaisglssfqrslwiaakaisswdwldissvnslaevhrlyvggpplekeprelfvkgtmkdirenfqdlmqycaqdvwathevfqqqlplflercphpvtlagmlemgvsylpvnqnwerylaeaqgtyeelqremkkslmdlandacqllsgerykedpwlwdlewdlqefkqkkakkvkkepatalgpcseeeefqqdvmaraclqklkgttellpkrpqhlpghpgwyrklcprlddpawtpgpsllslqmrvtpklmaltwdgfplhyserhgwgylnlaklptgttlesagvvcpyraieslyrkhclepyndvdipgcwffklphkdgnscnvgspfakdflpkmedgtlqagpggasgpraleinkmisfwrNahkrissqmvvwlprsalpravirhpdydeeglygailpqvvtagtitrRaveptwlTasnarpdrvgselkamvqappgytlvgadvdsqelwiaavlgdahfagmhgctafgwmtlqgrksrgtdlhsktattvgisrehakifnygriygagqpfaerllmqfnhrltqqeaaekaqqmyaatkgllrkvqretarksqwkkwevvaerawkggtesemfnklesiatsdiprtpvlgccisralepsavqeefmtsrvNwvvQssavdylhlmlvamkwlfeefaidgrfcisihdevrylvreedryraalalqitnlltrcmfayklglndlpqsvaffsavdidrclrkevtmdcktpsnptgmerrygipqgealdiyqiieltk >5c53_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PROBING THE STRUCTURAL AND MOLECULAR BASIS OF NUCLEOTIDE SELECTIVITY BY HUMAN MITOCHONDRIAL DNA POLYMERASE GAMMA organism=HOMO SAPIENS DNA sequence DT(T6):DA(P23) DA(T7):DT(P22) DC(T8):DG(P21) DG(T9):DC(P20) DG(T10):DC(P19) DC(T11):DG(P18) DA(T12):DT(P17) DC(T13):DG(P16) DT(T14):DA(P15) DG(T15):DC(P14) DG(T16):DC(P13) DC(T17):DG(P12) DC(T18):DG(P11) DC(T19):DG(P10) DT(T20):DA(P9) DC(T21):DG(P8) DG(T22):DC(P7) DT(T23):DA(P6) DT(T24):DA(P5) DT(T25):DA(P4) DT(T26):DA(P3) chainA (590) ASN803 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (640) ARG853 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (648) THR861 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (857) GLN1102 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlsrglheqifgqggempgeaavrrsvehlqkhglwgqpavplpdvelrlpplygdnldqhfrllaqkqslpyleaanlllqaqlppkppawawaegwtrygpegeavpvaipeeralvfdvevclaegtcptlavaispsawyswcsqrlveeryswtsqlspadliplevqeqlvvghnvsfdrahireqyliqgsrmrfldtmsmhmaisglssfqrslwiaakaisswdwldissvnslaevhrlyvggpplekeprelfvkgtmkdirenfqdlmqycaqdvwathevfqqqlplflercphpvtlagmlemgvsylpvnqnwerylaeaqgtyeelqremkkslmdlandacqllsgerykedpwlwdlewdlqefkqkkakkvkkepatalgpcseeeefqqdvmaraclqklkgttellpkrpqhlpghpgwyrklcprlddpawtpgpsllslqmrvtpklmaltwdgfplhyserhgwgylnlaklptgttlesagvvcpyraieslyrkhclepyndvdipgcwffklphkdgnscnvgspfakdflpkmedgtlqagpggasgpraleinkmisfwrNahkrissqmvvwlprsalpravirhpdydeeglygailpqvvtagtitrRaveptwlTasnarpdrvgselkamvqappgytlvgadvdsqelwiaavlgdahfagmhgctafgwmtlqgrksrgtdlhsktattvgisrehakifnygriygagqpfaerllmqfnhrltqqeaaekaqqmyaatkgllrkvqretarksqwkkwevvaerawkggtesemfnklesiatsdiprtpvlgccisralepsavqeefmtsrvnwvvQssavdylhlmlvamkwlfeefaidgrfcisihdevrylvreedryraalalqitnlltrcmfayklglndlpqsvaffsavdidrclrkevtmdcktpsnptgmerrygipqgealdiyqiieltk >5c5j_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POYMERASE NUCLEOTIDE COMPLEX organism=ESCHERICHIA COLI DNA sequence DG(G841):DC(H873) DG(G842):DC(H872) DG(G843):DC(H871) DT(G844):DA(H870) DC(G845):DG(H869) DC(G846):DG(H868) DT(G847):DA(H867) DA(G848):DT(H866) DG(G849):DC(H865) DG(G850):DC(H864) DA(G851):DT(H863) DC(G852):DG(H862) DC(G853):DG(H861) DC(G854):DG(H860) chainF (247) GLU246 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 4 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgvistanyparkfgvrsamptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5c8e_BC:Putative_DNA-binding_domain;Cobalamin_vitamin_B12-binding_domain; title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS CARH BOUND TO ADENOSYLCOBALAMIN AND A 26-BP DNA SEGMENT organism=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) DNA sequence DA(J1):DT(I26) DT(J2):DA(I25) DG(J3):DC(I24) DT(J4):DA(I23) DA(J5):DT(I22) DC(J6):DG(I21) DA(J7):DT(I20) DA(J8):DT(I19) DA(J9):DT(I18) DA(J10):DT(I17) DG(J11):DC(I16) DC(J12):DG(I15) DT(J13):DA(I14) DT(J14):DA(I13) DG(J15):DC(I12) DA(J16):DT(I11) DC(J17):DG(I10) DA(J18):DT(I9) DA(J19):DT(I8) DA(J20):DT(I7) DA(J21):DT(I6) DC(J22):DG(I5) DC(J23):DG(I4) DT(J24):DA(I3) DA(J25):DT(I2) DT(J26):DA(I1) chainB ( 18) VAL22 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLN25 0 0 0 6 17 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG29 0 0 0 0 2 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 22) GLU21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG24 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) GLN25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 0 ( 29) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 1 0 0 0 0 0 0 0 0 0 0 ( 30) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 7 0 0 0 0 0 0 0 0 ( 43) HIS42 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvytiaeveamtglsaeVlrQwerRygfpkprrtpgghrlysaedvealktikrwleegatpkaairrylaqevrpedlgtglleallrgdlagaealfrrglrfwgpegvlehlllpvlrevgeawhrgeigvaeehlastflrarlqelldlagfppgppvlvttppgerheigamlaayhlrrkgvpalylgpdtplpdlralarrlgagavvlsavlseplralpdgalkdlaprvflggqgagpeearrlgaeymedlkglaealwlprgp/hmtssgvytiaeveamtglsaEvlRQweRRygfpkprrtpggHrlysaedvealktikrwleegatpkaairrylaqevrpedlgtglleallrgdlagaealfrrglrfwgpegvlehlllpvlrevgeawhrgeigvaeehlastflrarlqelldlagfppgppvlvttppgerheigamlaayhlrrkgvpalylgpdtplpdlralarrlgagavvlsavlseplralpdgalkdlaprvflggqgagpeearrlgaeymedlkglaealwlpr >5c8e_C:Putative_DNA-binding_domain;Cobalamin_vitamin_B12-binding_domain; title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS CARH BOUND TO ADENOSYLCOBALAMIN AND A 26-BP DNA SEGMENT organism=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) DNA sequence DA(I1):DT(J26) DT(I2):DA(J25) DA(I3):DT(J24) DG(I4):DC(J23) DG(I5):DC(J22) DT(I6):DA(J21) DT(I7):DA(J20) DT(I8):DA(J19) DT(I9):DA(J18) DG(I10):DC(J17) DT(I11):DA(J16) DC(I12):DG(J15) DA(I13):DT(J14) DA(I14):DT(J13) DG(I15):DC(J12) DC(I16):DG(J11) DT(I17):DA(J10) DT(I18):DA(J9) DT(I19):DA(J8) DT(I20):DA(J7) DG(I21):DC(J6) DT(I22):DA(J5) DA(I23):DT(J4) DC(I24):DG(J3) DA(I25):DT(J2) DT(I26):DA(J1) chainC ( 22) GLU21 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG24 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) GLN25 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG28 0 0 0 0 0 0 0 0 0 0 1 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG29 0 0 0 0 0 0 0 0 7 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) HIS42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence hmtssgvytiaeveamtglsaEvlRQweRRygfpkprrtpggHrlysaedvealktikrwleegatpkaairrylaqevrpedlgtglleallrgdlagaealfrrglrfwgpegvlehlllpvlrevgeawhrgeigvaeehlastflrarlqelldlagfppgppvlvttppgerheigamlaayhlrrkgvpalylgpdtplpdlralarrlgagavvlsavlseplralpdgalkdlaprvflggqgagpeearrlgaeymedlkglaealwlpr >5c8e_EG:Putative_DNA-binding_domain;Cobalamin_vitamin_B12-binding_domain; title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS CARH BOUND TO ADENOSYLCOBALAMIN AND A 26-BP DNA SEGMENT organism=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) DNA sequence DA(L1):DT(K26) DT(L2):DA(K25) DG(L3):DC(K24) DT(L4):DA(K23) DA(L5):DT(K22) DC(L6):DG(K21) DA(L7):DT(K20) DA(L8):DT(K19) DA(L9):DT(K18) DA(L10):DT(K17) DG(L11):DC(K16) DC(L12):DG(K15) DT(L13):DA(K14) DT(L14):DA(K13) DG(L15):DC(K12) DA(L16):DT(K11) DC(L17):DG(K10) DA(L18):DT(K9) DA(L19):DT(K8) DA(L20):DT(K7) DA(L21):DT(K6) DC(L22):DG(K5) DC(L23):DG(K4) DT(L24):DA(K3) DA(L25):DT(K2) DT(L26):DA(K1) chainE ( 19) ARG24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 20) GLN25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 37) HIS42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainG ( 25) ARG24 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) GLN25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 ( 29) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 ( 30) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 12 0 0 0 0 0 0 0 0 ( 43) HIS42 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vytiaeveamtglsaevlRQwerrygfpkprrtpggHrlysaedvealktikrwleegatpkaairrylaqevrpedlgtglleallrgdlagaealfrrglrfwgpegvlehlllpvlrevgeawhrgeigvaeehlastflrarlqelldlagfppgppvlvttppgerheigamlaayhlrrkgvpalylgpdtplpdlralarrlgagavvlsavlseplralpdgalkdlaprvflggqgagpeearrlgaeymedlkglaealwlpr/hmtssgvytiaeveamtglsaevlRQweRRygfpkprrtpggHrlysaedvealktikrwleegatpkaairrylaqevrpedlgtglleallrgdlagaealfrrglrfwgpegvlehlllpvlrevgeawhrgeigvaeehlastflrarlqelldlagfppgppvlvttppgerheigamlaayhlrrkgvpalylgpdtplpdlralarrlgagavvlsavlseplralpdgalkdlaprvflggqgagpeearrlgaeymedlkglaealwlprg >5ca7_B:Nucleotidyltransferase;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE LAMBDA- MGDGTP BINARY AND COMPLEX WITH 6 PAIRED DNA organism=Homo sapiens DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) chainB (177) TYR505 0 0 0 0 8 7 (182) ALA510 0 0 0 0 0 7 (185) ASN513 0 0 0 0 0 6 (186) ARG514 0 0 0 0 0 22 (189) ARG517 0 0 0 0 4 12 prot.sequence sesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsQeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >5cbx_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCGR DNA BINDING DOMAIN - (+)GRE COMPLEX organism=UNCLASSIFIED DNA sequence DC(C2):DG(D18) DA(C3):DT(D17) DG(C4):DC(D16) DA(C5):DT(D15) DA(C6):DT(D14) DC(C7):DG(D13) DA(C8):DT(D12) DG(C9):DC(D11) DA(C10):DT(D10) DG(C11):DC(D9) DT(C12):DA(D8) DG(C13):DC(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DT(C17):DA(D3) DG(C18):DC(D2) chainA ( 24) LYS442 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL443 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG447 0 0 0 0 1 12 17 0 0 0 0 0 0 0 0 0 0 chainB ( 26) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 ( 27) VAL443 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 31) ARG447 0 0 0 0 0 0 0 0 0 0 16 12 3 0 0 0 0 prot.sequence kiclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrfrkclqagmnlea/ppkiclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrfrkclqagmnlea >5cbx_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCGR DNA BINDING DOMAIN - (+)GRE COMPLEX organism=UNCLASSIFIED DNA sequence DC(C2):DG(D18) DA(C3):DT(D17) DG(C4):DC(D16) DA(C5):DT(D15) DA(C6):DT(D14) DC(C7):DG(D13) DA(C8):DT(D12) DG(C9):DC(D11) DA(C10):DT(D10) DG(C11):DC(D9) DT(C12):DA(D8) DG(C13):DC(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DT(C17):DA(D3) DG(C18):DC(D2) chainB ( 26) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 ( 27) VAL443 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 31) ARG447 0 0 0 0 0 0 0 0 0 0 16 12 3 0 0 0 0 prot.sequence ppkiclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrfrkclqagmnlea >5cbx_EF:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCGR DNA BINDING DOMAIN - (+)GRE COMPLEX organism=UNCLASSIFIED DNA sequence DC(G2):DG(H18) DA(G3):DT(H17) DG(G4):DC(H16) DA(G5):DT(H15) DA(G6):DT(H14) DC(G7):DG(H13) DA(G8):DT(H12) DC(G9):DG(H11) DT(G10):DA(H10) DC(G11):DG(H9) DT(G12):DA(H8) DG(G13):DC(H7) DT(G14):DA(H6) DT(G15):DA(H5) DC(G16):DG(H4) DT(G17):DA(H3) DG(G18):DC(H2) chainE ( 26) LYS442 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) VAL443 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG447 0 0 0 0 1 13 17 0 0 0 0 0 0 0 0 0 0 chainF ( 26) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 ( 27) VAL443 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 ( 31) ARG447 0 0 0 0 0 0 0 0 0 0 16 12 1 0 0 0 0 prot.sequence ppkiclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrfrkclqagmnle/ppkiclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrfrkclqagmnlea >5cby_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCGR2 DNA BINDING DOMAIN - (+)GRE COMPLEX organism=UNCLASSIFIED DNA sequence DC(C2):DG(D18) DA(C3):DT(D17) DG(C4):DC(D16) DA(C5):DT(D15) DA(C6):DT(D14) DC(C7):DG(D13) DA(C8):DT(D12) DG(C9):DC(D11) DA(C10):DT(D10) DG(C11):DC(D9) DT(C12):DA(D8) DG(C13):DC(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DT(C17):DA(D3) DG(C18):DC(D2) chainA ( 26) LYS442 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) VAL443 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG447 0 0 0 0 1 14 13 0 0 0 0 0 0 0 0 0 0 prot.sequence ppkiclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrfrkclqagmnleark >5cby_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCGR2 DNA BINDING DOMAIN - (+)GRE COMPLEX organism=UNCLASSIFIED DNA sequence DC(D2):DG(C18) DA(D3):DT(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DC(D7):DG(C13) DA(D8):DT(C12) DC(D9):DG(C11) DT(D10):DA(C10) DC(D11):DG(C9) DT(D12):DA(C8) DG(D13):DC(C7) DT(D14):DA(C6) DT(D15):DA(C5) DC(D16):DG(C4) DT(D17):DA(C3) DG(D18):DC(C2) chainA ( 26) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 ( 27) VAL443 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 31) ARG447 0 0 0 0 0 0 0 0 0 0 13 14 1 0 0 0 0 chainB ( 25) LYS442 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG447 0 0 0 0 1 14 19 0 0 0 0 0 0 0 0 0 0 prot.sequence ppkiclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrfrkclqagmnleark/pkiclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrfrkclqagmnle >5cbz_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCMR DNA BINDING DOMAIN - (+)GRE COMPLEX organism=UNIDENTIFIED DNA sequence DC(D2):DG(C18) DA(D3):DT(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DC(D7):DG(C13) DA(D8):DT(C12) DC(D9):DG(C11) DT(D10):DA(C10) DC(D11):DG(C9) DT(D12):DA(C8) DG(D13):DC(C7) DT(D14):DA(C6) DT(D15):DA(C5) DC(D16):DG(C4) DT(D17):DA(C3) DG(D18):DC(C2) chainA ( 25) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 ( 26) VAL443 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 30) ARG447 0 0 0 0 0 0 0 0 0 0 17 11 1 0 0 0 0 chainB ( 25) LYS442 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG447 0 0 0 0 2 13 12 0 0 0 0 0 0 0 0 0 0 prot.sequence skvclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmnlga/skvclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmnlgar >5cbz_E:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCMR DNA BINDING DOMAIN - (+)GRE COMPLEX organism=UNIDENTIFIED DNA sequence DC(G2):DG(H18) DA(G3):DT(H17) DG(G4):DC(H16) DA(G5):DT(H15) DA(G6):DT(H14) DC(G7):DG(H13) DA(G8):DT(H12) DG(G9):DC(H11) DA(G10):DT(H10) DG(G11):DC(H9) DT(G12):DA(H8) DG(G13):DC(H7) DT(G14):DA(H6) DT(G15):DA(H5) DC(G16):DG(H4) DT(G17):DA(H3) DG(G18):DC(H2) chainE ( 27) LYS442 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) VAL443 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG447 0 0 0 0 1 13 17 0 0 0 0 0 0 0 0 0 0 prot.sequence ppskvclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmnlgar >5cbz_EF:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCMR DNA BINDING DOMAIN - (+)GRE COMPLEX organism=UNIDENTIFIED DNA sequence DC(H2):DG(G18) DA(H3):DT(G17) DG(H4):DC(G16) DA(H5):DT(G15) DA(H6):DT(G14) DC(H7):DG(G13) DA(H8):DT(G12) DC(H9):DG(G11) DT(H10):DA(G10) DC(H11):DG(G9) DT(H12):DA(G8) DG(H13):DC(G7) DT(H14):DA(G6) DT(H15):DA(G5) DC(H16):DG(G4) DT(H17):DA(G3) DG(H18):DC(G2) chainE ( 27) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 ( 28) VAL443 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 ( 32) ARG447 0 0 0 0 0 0 0 0 0 0 17 13 1 0 0 0 0 chainF ( 26) LYS442 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) VAL443 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG447 0 0 0 0 2 14 16 0 0 0 0 0 0 0 0 0 0 prot.sequence ppskvclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmnlgar/pskvclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmnlg >5cc0_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCSR2 - TSLP NGRE COMPLEX organism=synthetic construct DNA sequence DA(D1):DT(C16) DG(D2):DC(C15) DC(D3):DG(C14) DT(D4):DA(C13) DC(D5):DG(C12) DT(D6):DA(C11) DC(D7):DG(C10) DC(D8):DG(C9) DC(D9):DG(C8) DG(D10):DC(C7) DG(D11):DC(C6) DA(D12):DT(C5) DG(D13):DC(C4) DG(D14):DC(C3) DC(D15):DG(C2) DG(D16):DC(C1) chainA ( 25) LYS442 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 30) ARG447 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) LYS442 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 30) ARG447 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 9 prot.sequence qkvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlga/qkvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlg >5cc0_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=ANCSR2 - TSLP NGRE COMPLEX organism=synthetic construct DNA sequence DA(D1):DT(C16) DG(D2):DC(C15) DC(D3):DG(C14) DT(D4):DA(C13) DC(D5):DG(C12) DT(D6):DA(C11) DC(D7):DG(C10) DC(D8):DG(C9) DC(D9):DG(C8) DG(D10):DC(C7) DG(D11):DC(C6) DA(D12):DT(C5) DG(D13):DC(C4) DG(D14):DC(C3) DC(D15):DG(C2) DG(D16):DC(C1) chainB ( 25) LYS442 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 30) ARG447 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 9 prot.sequence qkvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlg >5cc1_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=S425G GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - (+)GRE COMPLEX organism=Homo sapiens DNA sequence DC(D2):DG(C18) DA(D3):DT(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DC(D7):DG(C13) DA(D8):DT(C12) DC(D9):DG(C11) DT(D10):DA(C10) DC(D11):DG(C9) DT(D12):DA(C8) DG(D13):DC(C7) DT(D14):DA(C6) DT(D15):DA(C5) DC(D16):DG(C4) DT(D17):DA(C3) DG(D18):DC(C2) chainA ( 26) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 ( 27) VAL443 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 31) ARG447 0 0 0 0 0 0 0 0 0 0 17 12 1 0 0 0 0 prot.sequence ppklclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear >5cc1_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=S425G GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - (+)GRE COMPLEX organism=Homo sapiens DNA sequence DC(D2):DG(C18) DA(D3):DT(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DC(D7):DG(C13) DA(D8):DT(C12) DC(D9):DG(C11) DT(D10):DA(C10) DC(D11):DG(C9) DT(D12):DA(C8) DG(D13):DC(C7) DT(D14):DA(C6) DT(D15):DA(C5) DC(D16):DG(C4) DT(D17):DA(C3) DG(D18):DC(C2) chainA ( 26) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 ( 27) VAL443 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 31) ARG447 0 0 0 0 0 0 0 0 0 0 17 12 1 0 0 0 0 chainB ( 25) LYS442 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG447 0 0 0 0 1 13 12 0 0 0 0 0 0 0 0 0 0 prot.sequence ppklclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear/pklclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >5cc1_WX:Glucocorticoid_receptor-like_DNA-binding_domain; title=S425G GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - (+)GRE COMPLEX organism=Homo sapiens DNA sequence DC(Y2):DG(Z18) DA(Y3):DT(Z17) DG(Y4):DC(Z16) DA(Y5):DT(Z15) DA(Y6):DT(Z14) DC(Y7):DG(Z13) DA(Y8):DT(Z12) DC(Y9):DG(Z11) DT(Y10):DA(Z10) DC(Y11):DG(Z9) DT(Y12):DA(Z8) DG(Y13):DC(Z7) DT(Y14):DA(Z6) DT(Y15):DA(Z5) DC(Y16):DG(Z4) DT(Y17):DA(Z3) DG(Y18):DC(Z2) chainW ( 26) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 ( 27) VAL443 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 31) ARG447 0 0 0 0 0 0 0 0 0 0 17 12 1 0 0 0 0 chainX ( 25) LYS442 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG447 0 0 0 0 1 13 12 0 0 0 0 0 0 0 0 0 0 prot.sequence ppklclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear/pklclvcgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >5cdm_AB:Type_II_DNA_topoisomerase; title=2.5A STRUCTURE OF QPT-1 WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(E2):DT(N2019) DG(E3):DC(N2018) DC(E4):DG(N2017) DG(E5):DC(N2016) DT(E6):DA(N2015) DA(E7):DT(N2014) DC(E8):DG(N2013) chainB ( 44) LYS460 0 0 0 0 0 3 3 chainA ( 77) SER85 0 0 0 0 0 2 0 ( 84) ARG92 0 0 0 0 1 0 0 (166) ILE175 0 0 24 20 0 0 0 prot.sequence inernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvRmaqdfsyryplvdgqgnfgsmdgdgaaamrtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >5cdm_B:Type_II_DNA_topoisomerase; title=2.5A STRUCTURE OF QPT-1 WITH S.AUREUS DNA GYRASE AND DNA organism=? DNA sequence DA(E2):DT(N2019) DG(E3):DC(N2018) DC(E4):DG(N2017) DG(E5):DC(N2016) DT(E6):DA(N2015) DA(E7):DT(N2014) DC(E8):DG(N2013) chainB ( 44) LYS460 0 0 0 0 0 3 3 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >5cdm_CD:Type_II_DNA_topoisomerase; title=2.5A STRUCTURE OF QPT-1 WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(I2013):DC(F8) DT(I2014):DA(F7) DA(I2015):DT(F6) DC(I2016):DG(F5) DG(I2017):DC(F4) DC(I2018):DG(F3) DT(I2019):DA(F2) chainD ( 45) LYS460 2 2 0 0 0 0 0 chainC ( 76) SER85 0 3 0 0 0 0 0 (165) ILE175 0 0 0 20 23 0 0 (320) SER330 0 0 0 0 0 0 2 prot.sequence nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtSfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/gkladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >5cdn_AB:Type_II_DNA_topoisomerase; title=2.8A STRUCTURE OF ETOPOSIDE WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DA(F2):DT(G2019) DG(F3):DC(G2018) DC(F4):DG(G2017) DG(F5):DC(G2016) DT(F6):DA(G2015) DA(F7):DT(G2014) DC(F8):DG(G2013) chainA ( 76) SER85 0 0 0 0 0 3 0 (165) ILE175 0 0 20 16 0 0 0 chainB ( 44) LYS460 0 0 0 0 0 4 3 prot.sequence nernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav >5cdn_B:Type_II_DNA_topoisomerase; title=2.8A STRUCTURE OF ETOPOSIDE WITH S.AUREUS DNA GYRASE AND DNA organism=? DNA sequence DG(G2013):DC(F8) DT(G2014):DA(F7) DA(G2015):DT(F6) DC(G2016):DG(F5) DG(G2017):DC(F4) DC(G2018):DG(F3) DT(G2019):DA(F2) chainB ( 44) LYS460 3 4 0 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav >5cdn_CD:Type_II_DNA_topoisomerase; title=2.8A STRUCTURE OF ETOPOSIDE WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DG(O2013):DC(E8) DT(O2014):DA(E7) DA(O2015):DT(E6) DC(O2016):DG(E5) DG(O2017):DC(E4) DC(O2018):DG(E3) DT(O2019):DA(E2) chainC ( 75) SER85 0 2 0 0 0 0 0 (164) ILE175 0 0 0 14 22 0 0 chainD ( 44) LYS460 2 3 0 0 0 0 0 prot.sequence ernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >5cdn_RS:Type_II_DNA_topoisomerase; title=2.8A STRUCTURE OF ETOPOSIDE WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DG(N2013):DC(W8) DT(N2014):DA(W7) DA(N2015):DT(W6) DC(N2016):DG(W5) DG(N2017):DC(W4) DC(N2018):DG(W3) DT(N2019):DA(W2) chainR ( 16) TYR25 0 0 1 0 0 0 0 ( 76) SER85 0 3 0 0 0 0 0 (165) ILE175 0 0 0 15 21 0 0 chainS ( 44) LYS460 2 3 0 0 0 0 0 prot.sequence nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieerqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav >5cdn_TU:Type_II_DNA_topoisomerase; title=2.8A STRUCTURE OF ETOPOSIDE WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DA(V2):DT(P2019) DG(V3):DC(P2018) DC(V4):DG(P2017) DG(V5):DC(P2016) DT(V6):DA(P2015) DA(V7):DT(P2014) DC(V8):DG(P2013) chainT ( 76) SER85 0 0 0 0 0 2 0 (165) ILE175 0 0 21 16 0 0 0 chainU ( 44) LYS460 0 0 0 0 0 2 2 prot.sequence nernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >5cdo_ABCD:Type_II_DNA_topoisomerase; title=3.15A STRUCTURE OF QPT-1 WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DG(F1):DT(E2020) DA(F2):DT(E2019) DG(F3):DC(E2018) DC(F4):DG(E2017) DG(F5):DC(E2016) DT(F6):DA(E2015) DA(F7):DT(E2014) DC(F8):DG(E2013) DG(F2009):DC(E2012) DG(F2010):DC(E2011) DC(F2011):DG(E2010) DC(F2012):DG(E2009) DG(F2013):DC(E8) DT(F2014):DA(E7) DA(F2015):DT(E6) DC(F2016):DG(E5) DG(F2017):DC(E4) DC(F2018):DG(E3) DT(F2019):DA(E2) DT(F2020):DG(E1) chainA ( 17) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) SER85 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (166) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 20 0 0 0 chainB ( 42) ARG458 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 chainC ( 15) TYR25 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) SER85 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) GLU88 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ILE175 0 0 0 26 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ALA180 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 44) LYS460 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence inernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav/ernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmAtnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav >5cdo_D:Type_II_DNA_topoisomerase; title=3.15A STRUCTURE OF QPT-1 WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DG(E1):DT(F2020) DA(E2):DT(F2019) DG(E3):DC(F2018) DC(E4):DG(F2017) DG(E5):DC(F2016) DT(E6):DA(F2015) DA(E7):DT(F2014) DC(E8):DG(F2013) DG(E2009):DC(F2012) DG(E2010):DC(F2011) DC(E2011):DG(F2010) DC(E2012):DG(F2009) DG(E2013):DC(F8) DT(E2014):DA(F7) DA(E2015):DT(F6) DC(E2016):DG(F5) DG(E2017):DC(F4) DC(E2018):DG(F3) DT(E2019):DA(F2) DT(E2020):DG(F1) chainD ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav >5cdo_RSTU:Type_II_DNA_topoisomerase; title=3.15A STRUCTURE OF QPT-1 WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DG(W1):DT(V2020) DA(W2):DT(V2019) DG(W3):DC(V2018) DC(W4):DG(V2017) DG(W5):DC(V2016) DT(W6):DA(V2015) DA(W7):DT(V2014) DC(W8):DG(V2013) DG(W2009):DC(V2012) DG(W2010):DC(V2011) DC(W2011):DG(V2010) DC(W2012):DG(V2009) DG(W2013):DC(V8) DT(W2014):DA(V7) DA(W2015):DT(V6) DC(W2016):DG(V5) DG(W2017):DC(V4) DC(W2018):DG(V3) DT(W2019):DA(V2) DT(W2020):DG(V1) chainR ( 16) TYR25 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) SER85 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ILE175 0 0 0 20 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainS ( 42) ARG458 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 chainT ( 24) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 76) SER85 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 79) GLU88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (113) ARG122 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (165) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 20 0 0 0 chainU ( 42) ARG458 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 prot.sequence nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieerqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav/nernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiedna >5cdp_A:Type_II_DNA_topoisomerase; title=2.45A STRUCTURE OF ETOPOSIDE WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DC(H2013):DG(E8) DT(H2014):DA(E7) DA(H2015):DT(E6) DC(H2016):DG(E5) DG(H2017):DC(E4) DG(H2018):DC(E3) DC(H2019):DG(E2) chainA ( 77) SER85 0 2 0 0 0 0 0 ( 84) ARG92 0 0 1 0 0 0 0 (167) ILE175 0 0 0 19 25 0 0 prot.sequence inernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvRmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg >5cdp_AB:Type_II_DNA_topoisomerase; title=2.45A STRUCTURE OF ETOPOSIDE WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DG(E2):DC(H2019) DC(E3):DG(H2018) DC(E4):DG(H2017) DG(E5):DC(H2016) DT(E6):DA(H2015) DA(E7):DT(H2014) DG(E8):DC(H2013) chainA ( 77) SER85 0 0 0 0 0 2 0 ( 84) ARG92 0 0 0 0 1 0 0 (167) ILE175 0 0 25 19 0 0 0 chainB ( 44) LYS460 0 0 0 0 0 3 6 prot.sequence inernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvRmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavya >5cdp_CD:Type_II_DNA_topoisomerase; title=2.45A STRUCTURE OF ETOPOSIDE WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DG(G2009):DC(H2012) DT(G2010):DA(H2011) DA(G2011):DT(H2010) DC(G2012):DG(H2009) DC(G2013):DG(F8) DT(G2014):DA(F7) DA(G2015):DT(F6) DC(G2016):DG(F5) DG(G2017):DC(F4) DG(G2018):DC(F3) DC(G2019):DG(F2) DT(G2020):DA(F1) chainC ( 16) TYR25 0 0 0 0 0 0 1 0 0 0 0 0 ( 24) ARG33 0 0 0 0 0 0 1 0 0 0 0 0 ( 76) SER85 0 0 0 0 0 2 0 0 0 0 0 0 (166) ILE175 0 0 0 0 0 0 0 20 26 0 0 0 chainD ( 44) LYS460 0 0 0 0 6 3 0 0 0 0 0 0 prot.sequence nernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >5cdq_ABCD:Type_II_DNA_topoisomerase; title=2.95A STRUCTURE OF MOXIFLOXACIN WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DA(F2):DT(E2019) DG(F3):DC(E2018) DC(F4):DG(E2017) DG(F5):DC(E2016) DT(F6):DA(E2015) DA(F7):DT(E2014) DT(F8):DA(E2013) DG(F2009):DC(E2012) DG(F2010):DC(E2011) DC(F2011):DG(E2010) DC(F2012):DG(E2009) DA(F2013):DT(E8) DT(F2014):DA(E7) DA(F2015):DT(E6) DC(F2016):DG(E5) DG(F2017):DC(E4) DC(F2018):DG(E3) DT(F2019):DA(E2) chainA ( 16) TYR25 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) SER85 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (113) ARG122 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (165) ILE175 0 0 19 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 46) LYS460 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 chainC ( 16) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (113) ARG122 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (165) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 22 0 0 chainD ( 47) LYS460 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 prot.sequence nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/pgkladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy/nernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdssiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/lpgkladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiedna >5cdq_R:Type_II_DNA_topoisomerase; title=2.95A STRUCTURE OF MOXIFLOXACIN WITH S.AUREUS DNA GYRASE AND DNA organism=? DNA sequence DA(V2):DT(W2019) DG(V3):DC(W2018) DC(V4):DG(W2017) DG(V5):DC(W2016) DT(V6):DA(W2015) DA(V7):DT(W2014) DT(V8):DA(W2013) DG(V2009):DC(W2012) DG(V2010):DC(W2011) DC(V2011):DG(W2010) DC(V2012):DG(W2009) DA(V2013):DT(W8) DT(V2014):DA(W7) DA(V2015):DT(W6) DC(V2016):DG(W5) DG(V2017):DC(W4) DC(V2018):DG(W3) DT(V2019):DA(W2) chainR ( 76) SER85 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (113) ARG122 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (165) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 19 0 0 prot.sequence nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >5cdq_RSTU:Type_II_DNA_topoisomerase; title=2.95A STRUCTURE OF MOXIFLOXACIN WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DA(W2):DT(V2019) DG(W3):DC(V2018) DC(W4):DG(V2017) DG(W5):DC(V2016) DT(W6):DA(V2015) DA(W7):DT(V2014) DT(W8):DA(V2013) DG(W2009):DC(V2012) DG(W2010):DC(V2011) DC(W2011):DG(V2010) DC(W2012):DG(V2009) DA(W2013):DT(V8) DT(W2014):DA(V7) DA(W2015):DT(V6) DC(W2016):DG(V5) DG(W2017):DC(V4) DC(W2018):DG(V3) DT(W2019):DA(V2) chainR ( 76) SER85 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (113) ARG122 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (165) ILE175 0 0 19 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainS ( 47) LYS460 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 chainT ( 16) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 76) SER85 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (113) ARG122 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (165) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 20 0 0 chainU ( 47) LYS460 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 prot.sequence nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/lpgkladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavya/nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/lpgkladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >5cdr_A:Type_II_DNA_topoisomerase; title=2.65 STRUCTURE OF S.AUREUS DNA GYRASE AND ARTIFICIALLY NICKED DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DC(F2013):DG(E8) DT(F2014):DA(E7) DA(F2015):DT(E6) DC(F2016):DG(E5) DG(F2017):DC(E4) DG(F2018):DC(E3) DC(F2019):DG(E2) chainA ( 77) SER85 0 2 0 0 0 0 0 ( 84) ARG92 0 0 1 0 0 0 0 (167) ILE175 0 0 0 17 21 0 0 prot.sequence inernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvRmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg >5cdr_AB:Type_II_DNA_topoisomerase; title=2.65 STRUCTURE OF S.AUREUS DNA GYRASE AND ARTIFICIALLY NICKED DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DG(E2):DC(F2019) DC(E3):DG(F2018) DC(E4):DG(F2017) DG(E5):DC(F2016) DT(E6):DA(F2015) DA(E7):DT(F2014) DG(E8):DC(F2013) chainA ( 77) SER85 0 0 0 0 0 2 0 ( 84) ARG92 0 0 0 0 1 0 0 (167) ILE175 0 0 21 17 0 0 0 chainB ( 44) LYS460 0 0 0 0 0 3 6 prot.sequence inernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvRmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavya >5cdr_CD:Type_II_DNA_topoisomerase; title=2.65 STRUCTURE OF S.AUREUS DNA GYRASE AND ARTIFICIALLY NICKED DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DA(F1):DT(G2020) DG(F2):DC(G2019) DC(F3):DG(G2018) DC(F4):DG(G2017) DG(F5):DC(G2016) DT(F6):DA(G2015) DA(F7):DT(G2014) DG(F8):DC(G2013) chainC ( 76) SER85 0 0 0 0 0 0 2 0 (166) ILE175 0 0 0 22 18 0 0 0 chainD ( 42) ARG458 0 0 0 0 0 0 0 35 ( 44) LYS460 0 0 0 0 0 0 4 6 prot.sequence nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >5cg8_A:Regulatory_protein_AraC; title=NGTET1 IN COMPLEX WITH 5HMC DNA organism=Naegleria gruberi DNA sequence DA(B1):DT(C28) DG(B2):DC(C27) DA(B3):DT(C26) DA(B4):DT(C25) DT(B5):DA(C24) DT(B6):DA(C23) DC(B7):DG(C22) DC(B8):DG(C21) DG(B9):DA(C19) DT(B10):DA(C18) DT(B11):DG(C17) DC(B12):DG(C16) DC(B13):DT(C15) chainA ( 93) SER148 0 0 0 0 0 0 0 2 6 0 0 0 0 ( 94) MET149 0 0 0 0 0 0 0 3 0 0 0 0 0 (255) GLN310 0 0 0 0 0 0 0 11 0 0 0 0 0 prot.sequence minkksllqnllskckttfqqsftnanitlkdekwlknvrtayfvcdhdgsvelaylpnvlpkelveeftekfesiqtgrkkdtgysgildnSMpfnyvtadlsqelgqylseivnpqinyyisklltcvssrtinylvslndsyyalnnclypstafnslkpsndghrirkphkdnlditpsslfyfgnfqntegyleltdknckvfvqpgdvlffkgneykhvvanitsgwriglvyfahkgsktkpyyedtQknslkihketk >5cg9_A:Regulatory_protein_AraC; title=NGTET1 IN COMPLEX WITH 5MC DNA IN SPACE GROUP P3221 organism=Naegleria gruberi DNA sequence DA(B4):DT(C24) DT(B5):DA(C23) DG(B6):DC(C22) DC(B7):DG(C21) DG(B8):5CM(C20) DC(B9):DG(C19) DT(B10):DA(C18) DG(B11):DC(C17) DA(B12):DT(C16) DC(B13):DG(C15) chainA ( 87) TYR141 0 0 0 0 3 0 0 0 0 0 ( 93) ASN147 0 0 0 0 4 0 0 0 0 0 ( 94) SER148 0 0 0 0 6 0 0 0 0 0 ( 95) MET149 0 0 0 4 0 0 0 0 0 0 (158) ALA212 0 0 0 0 3 0 0 0 0 0 (170) ARG224 0 0 0 0 8 0 0 0 0 0 (177) ASP231 0 0 0 0 9 0 0 0 0 0 (180) ASP234 0 0 0 0 5 0 0 0 0 0 (239) VAL293 0 0 0 0 3 0 0 0 0 0 (241) PHE295 0 0 0 0 31 0 0 0 0 0 (243) HIS297 0 0 0 0 12 0 0 0 0 0 (256) GLN310 0 0 1 22 0 0 0 0 0 0 prot.sequence hminkksllqnllskckttfqqsftnanitlkdekwlknvrtayfvcdhdgsvelaylpnvlpkelveeftekfesiqtgrkkdtgysgildnSMpfnyvtadlsqelgqylseivnpqinyyisklltcvssrtinylvslndsyyalnnclypstafnslkpsndghrirkphkdnlditpsslfyfgnfqntegyleltdknckvfvqpgdvlffkgneykhvvanitsgwriglvyfahkgsktkpyyedtQknslkihketk >5chg_A:Nucleotidyltransferase;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE LAMBDA L431A MUTANT- MGDGTP BINARY AND COMPLEX WITH 6 PAIRED DNA organism=Homo sapiens DNA sequence DG(T6):DC(P6) DT(T7):DA(P5) DA(T8):DT(P4) DC(T9):DG(P3) DT(T10):DA(P2) DG(T11):DC(P1) chainA (136) GLU465 0 0 0 1 0 0 (176) TYR505 6 8 0 0 0 0 (181) ALA510 7 0 0 0 0 0 (184) ASN513 7 0 0 0 0 0 (185) ARG514 25 0 0 0 0 0 (188) ARG517 11 3 0 0 0 0 prot.sequence esvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvaithpdgrshrgifsrlldslrqegfltddlvsqEengqqqkylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >5chz_A:DNA-glycosylase; title=STRUCTURE OF WILD-TYPE HUMAN MBD4 BOUND TO A G:T MISMATCH organism=Homo sapiens DNA sequence DC(D7):DG(C6) DG(D8):DC(C5) DC(D9):DG(C4) DT(D10):DA(C3) DG(D11):DC(C2) DG(D12):DC(C1) chainA ( 31) ARG468 2 0 0 0 0 0 ( 32) THR469 1 0 0 0 0 0 ( 33) SER470 1 0 0 0 0 0 prot.sequence wtpprspfnlvqetlfhdpwklliatiflnRTSgkmaipvlwkflekypsaevartadwrdvsellkplglydlraktivkfsdeyltkqwkypielhgigkygndsyrifcvnewkqvhpedhklnkyhdwlwenhekl >5ciy_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURAL BASIS OF THE RECOGNITION OF H3K36ME3 BY DNMT3B PWWP DOMAIN organism=Haemophilus parahaemolyticus DNA sequence DC(C402):DG(D433) DC(C403):DG(D432) DA(C404):DT(D431) DT(C405):DA(D430) DG(C406):DC(D429) DC(C407):DG(D428) DC(C409):DG(D426) DT(C410):DA(D425) DG(C411):DC(D424) DA(C412):DT(D423) DC(C413):DG(D422) chainA ( 86) ILE86 0 0 0 0 0 0 2 5 1 0 0 ( 87) SER87 0 0 0 0 0 3 9 0 0 0 0 (228) ARG228 0 0 0 0 0 0 0 2 0 0 0 (237) GLN237 0 0 0 0 0 23 29 0 0 0 0 (239) GLU239 0 0 0 0 1 2 0 0 0 0 0 (240) ARG240 0 0 0 0 0 0 12 11 0 0 0 (260) ALA260 0 0 0 1 0 0 0 0 0 0 0 (261) LYS261 0 0 0 1 0 0 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgERiystrgiaitlsaygggifAKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy >5ciz_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=E. COLI RNA POLYMERASE ALPHA SUBUNIT CTD IN COMPLEX WITH CAP AND DNA: A(5)-TRACT BINDING SITE FOR ALPHA CTD organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(D1):DG(E44) DT(D2):DA(E43) DT(D3):DA(E42) DT(D4):DA(E41) DT(D5):DA(E40) DT(D6):DA(E39) DG(D7):DC(E38) DC(D8):DG(E37) DC(D9):DG(E36) DT(D10):DA(E35) DA(D11):DT(E34) DA(D12):DT(E33) DA(D13):DT(E32) DA(D14):DT(E31) DT(D15):DA(E30) DG(D16):DC(E29) DT(D17):DA(E28) DG(D18):DC(E27) DA(D19):DT(E26) DT(D20):DA(E25) chainA (164) GLN170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (173) SER179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (174) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 8 1 0 0 0 (175) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 7 0 (179) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 10 1 prot.sequence tdptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcSREtvgRilkmledqnlisahgktivvygtr >5ciz_AB:C-terminal_domain_of_RNA_polymerase_alpha_subunit;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=E. COLI RNA POLYMERASE ALPHA SUBUNIT CTD IN COMPLEX WITH CAP AND DNA: A(5)-TRACT BINDING SITE FOR ALPHA CTD organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(D1):DG(E44) DT(D2):DA(E43) DT(D3):DA(E42) DT(D4):DA(E41) DT(D5):DA(E40) DT(D6):DA(E39) DG(D7):DC(E38) DC(D8):DG(E37) DC(D9):DG(E36) DT(D10):DA(E35) DA(D11):DT(E34) DA(D12):DT(E33) DA(D13):DT(E32) DA(D14):DT(E31) DT(D15):DA(E30) DG(D16):DC(E29) DT(D17):DA(E28) DG(D18):DC(E27) DA(D19):DT(E26) DT(D20):DA(E25) chainA (164) GLN170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (173) SER179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (174) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 8 1 0 0 0 (175) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 7 0 (179) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 10 1 chainB ( 17) ARG265 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tdptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcSREtvgRilkmledqnlisahgktivvygtr/fdpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >5cj7_A:Nucleotidyltransferase;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE LAMBDA L431A MUTANT- MGDTTP BINARY AND COMPLEX WITH 6 PAIRED DNA organism=Homo sapiens DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) chainA (135) GLN464 0 0 1 0 0 0 (176) TYR505 0 0 0 0 8 6 (181) ALA510 0 0 0 0 0 7 (184) ASN513 0 0 0 0 0 5 (185) ARG514 0 0 0 0 0 19 (188) ARG517 0 0 0 0 3 12 prot.sequence esvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvaithpdgrshrgifsrlldslrqegfltddlvsQeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >5cky_O: title=CRYSTAL STRUCTURE OF THE MTERF1 R162A SUBSTITUTION BOUND TO THE TERMINATION SEQUENCE. organism=Homo sapiens DNA sequence DA(D1):DT(E22) DT(D2):DA(E21) DT(D3):DA(E20) DA(D4):DT(E19) DC(D5):DG(E18) DC(D6):DG(E17) DG(D7):DC(E16) DG(D8):DC(E15) DG(D9):DC(E14) DC(D10):DG(E13) DT(D11):DA(E12) DC(D12):DG(E11) DT(D13):DA(E10) DG(D14):DC(E9) DC(D15):DG(E8) DC(D16):DG(E7) DA(D17):DT(E6) DT(D18):DA(E5) DC(D19):DG(E4) DT(D20):DA(E3) DT(D21):DA(E2) DA(D22):DT(E1) chainO ( 56) TYR128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 58) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 ( 87) ILE159 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 90) ALA162 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 93) GLU165 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 ( 97) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 14 0 0 0 0 0 (123) ARG195 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (126) THR198 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (127) ASN199 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 0 0 (130) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 5 6 9 1 0 0 0 0 0 0 (170) PRO242 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (171) PHE243 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (179) ARG251 0 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 (208) GLU280 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (212) LEU284 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (213) SER285 0 0 0 0 0 0 0 0 0 0 6 2 3 0 0 0 0 0 0 0 0 0 (216) TYR288 0 0 0 0 0 0 0 0 0 0 56 0 0 0 0 0 0 0 0 0 0 0 (247) ASP319 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG350 0 0 0 0 0 12 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ASP353 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER384 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) ARG387 0 0 0 8 14 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence edllknlltmgvdidmarkrqpgvfhrmitneqdlkmfllskgaskeviasiisrYpRaitrtpenlskrwdlwrkivtsdleivnIleAspEsffRsnnnlnlennikflysvgltrkclcRllTNapRtfsnsldlnkqmveflqaaglslghndpadfvrkiifknPFiliqstkRvkanieflrstfnlnseellvlicgpgaEildLSndYarrsyanikeklfslgcteeevqkfvlsypDviflaekkfndkidclmeenisisqiienpRvlDssistlksrikelvnagcnlstlnitllswSkkRyeaklkkls >5cl3_A:ARM_repeat; title=ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING A 3- METHYLADENINE ANALOG (100% SUBSTRATE AT 4 HOURS) organism=BACILLUS CEREUS DNA sequence DC(B1):DG(C24) DC(B2):DG(C23) DC(B3):DG(C22) DG(B4):DC(C21) DA(B5):DT(C20) DZM(B6):DT(C19) DA(B7):DT(C18) DG(B8):DC(C17) DT(B9):DA(C16) DC(B10):DG(C15) DC(B11):DG(C14) DG(B12):DC(C13) chainA ( 29) TYR27 0 0 0 0 0 4 7 0 0 0 0 0 (111) TRP109 0 0 0 0 0 3 0 0 0 0 0 0 (185) LYS183 0 0 0 0 0 0 2 0 0 0 0 0 (217) ARG215 0 0 0 0 0 0 0 0 0 0 3 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskReaikhikqnyginn >5cl4_A:ARM_repeat; title=ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING A 3- METHYLADENINE ANALOG OR DNA CONTAINING AN ABASIC SITE AND A FREE NUCLEOBASE (71% SUBSTRATE/29% PRODUCT AT 24 HOURS) organism=BACILLUS CEREUS DNA sequence DC(B1):DG(C24) DC(B2):DG(C23) DC(B3):DG(C22) DG(B4):DC(C21) DA(B5):DT(C20) DZM(B6):DT(C19) DA(B7):DT(C18) DG(B8):DC(C17) DT(B9):DA(C16) DC(B10):DG(C15) DC(B11):DG(C14) DG(B12):DC(C13) chainA ( 29) TYR27 0 0 0 0 0 6 8 0 0 0 0 0 (111) TRP109 0 0 0 0 0 3 0 0 0 0 0 0 (185) LYS183 0 0 0 0 0 0 2 0 0 0 0 0 (217) ARG215 0 0 0 0 0 0 0 0 0 0 3 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskReaikhikqnyginn >5cl5_A:ARM_repeat; title=ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING A 3- METHYLADENINE ANALOG OR DNA CONTAINING AN ABASIC SITE AND A FREE NUCLEOBASE (51% SUBSTRATE/49% PRODUCT AT 48 HOURS) organism=BACILLUS CEREUS DNA sequence DC(C13):DG(B12) DG(C14):DC(B11) DG(C15):DC(B10) DA(C16):DT(B9) DC(C17):DG(B8) DT(C18):DA(B7) DT(C19):DZM(B6) DT(C20):DA(B5) DC(C21):DG(B4) DG(C22):DC(B3) DG(C23):DC(B2) DG(C24):DC(B1) chainA ( 29) TYR27 0 0 0 0 0 8 7 0 0 0 0 0 (111) TRP109 0 0 0 0 0 0 5 0 0 0 0 0 (185) LYS183 0 0 0 0 0 2 0 0 0 0 0 0 (217) ARG215 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskReaikhikqnyginn >5cl6_A:ARM_repeat; title=ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING A 3- METHYLADENINE ANALOG OR DNA CONTAINING AN ABASIC SITE AND A FREE NUCLEOBASE (33% SUBSTRATE/67% PRODUCT AT 72 HOURS) organism=BACILLUS CEREUS DNA sequence DC(C13):DG(B12) DG(C14):DC(B11) DG(C15):DC(B10) DA(C16):DT(B9) DC(C17):DG(B8) DT(C18):DA(B7) DT(C19):DZM(B6) DT(C20):DA(B5) DC(C21):DG(B4) DG(C22):DC(B3) DG(C23):DC(B2) DG(C24):DC(B1) chainA ( 29) TYR27 0 0 0 0 0 7 5 0 0 0 0 0 (111) TRP109 0 0 0 0 0 0 3 0 0 0 0 0 (185) LYS183 0 0 0 0 0 2 0 0 0 0 0 0 (217) ARG215 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskReaikhikqnyginn >5cl7_A:ARM_repeat; title=ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING A 3- METHYLADENINE ANALOG OR DNA CONTAINING AN ABASIC SITE AND A FREE NUCLEOBASE (18% SUBSTRATE/82% PRODUCT AT 96 HOURS) organism=BACILLUS CEREUS DNA sequence DC(C13):DG(B12) DG(C14):DC(B11) DG(C15):DC(B10) DA(C16):DT(B9) DC(C17):DG(B8) DT(C18):DA(B7) DT(C19):DZM(B6) DT(C20):DA(B5) DC(C21):DG(B4) DG(C22):DC(B3) DG(C23):DC(B2) DG(C24):DC(B1) chainA ( 29) TYR27 0 0 0 0 0 8 6 0 0 0 0 0 (111) TRP109 0 0 0 0 0 0 5 0 0 0 0 0 (185) LYS183 0 0 0 0 0 2 0 0 0 0 0 0 (217) ARG215 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskReaikhikqnyginn >5cl8_A:ARM_repeat; title=ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING AN ABASIC SITE AND A FREE NUCLEOBASE (100% PRODUCT AT 144 HOURS) organism=BACILLUS CEREUS DNA sequence DC(C13):DG(B12) DG(C14):DC(B11) DG(C15):DC(B10) DA(C16):DT(B9) DC(C17):DG(B8) DT(C18):DA(B7) DT(C19):DA(B5) DT(C20):DG(B4) DC(C21):DC(B3) DG(C22):DC(B2) DG(C23):DC(B1) chainA ( 29) TYR27 0 0 0 0 0 8 0 0 0 0 0 (185) LYS183 0 0 0 0 0 1 0 0 0 0 0 (217) ARG215 0 3 0 0 0 0 0 0 0 0 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskReaikhikqnyginn >5cl9_A:ARM_repeat; title=ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING AN ABASIC SITE AND A FREE NUCLEOBASE (100% PRODUCT AT 240 HOURS) organism=BACILLUS CEREUS DNA sequence DC(B1):DG(C23) DC(B2):DG(C22) DC(B3):DC(C21) DG(B4):DT(C20) DA(B5):DT(C19) DA(B7):DT(C18) DG(B8):DC(C17) DT(B9):DA(C16) DC(B10):DG(C15) DC(B11):DG(C14) DG(B12):DC(C13) chainA ( 29) TYR27 0 0 0 0 0 8 0 0 0 0 0 (185) LYS183 0 0 0 0 0 2 0 0 0 0 0 (217) ARG215 0 0 0 0 0 0 0 0 0 3 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskReaikhikqnyginn >5cla_A:ARM_repeat; title=ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING AN ABASIC SITE AND A FREE NUCLEOBASE (100% PRODUCT AT 360 HOURS) organism=BACILLUS CEREUS DNA sequence DC(B1):DG(C23) DC(B2):DG(C22) DC(B3):DC(C21) DG(B4):DT(C20) DA(B5):DT(C19) DA(B7):DT(C18) DG(B8):DC(C17) DT(B9):DA(C16) DC(B10):DG(C15) DC(B11):DG(C14) DG(B12):DC(C13) chainA ( 29) TYR27 0 0 0 0 0 8 0 0 0 0 0 (185) LYS183 0 0 0 0 0 2 0 0 0 0 0 (217) ARG215 0 0 0 0 0 0 0 0 0 2 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskReaikhikqnyginn >5clb_A:ARM_repeat; title=ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING A 3- METHYLADENINE ANALOG (9-MER A) organism=BACILLUS CEREUS DNA sequence DG(C11):DC(B9) DG(C12):DC(B8) DT(C13):DA(B7) DT(C14):DZM(B6) DT(C15):DA(B5) DG(C16):DC(B4) DC(C17):DG(B3) DT(C18):DA(B2) chainA ( 29) TYR27 0 0 7 4 0 0 0 0 (108) TRP109 0 0 0 2 0 0 0 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskreaikhikqny >5clc_A:ARM_repeat; title=ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING A 3- METHYLADENINE ANALOG (9-MER B) organism=BACILLUS CEREUS DNA sequence DG(C11):DC(B9) DG(C12):DC(B8) DG(C13):DC(B7) DT(C14):DZM(B6) DG(C15):DC(B5) DG(C16):DC(B4) DC(C17):DG(B3) DT(C18):DA(B2) chainA ( 29) TYR27 0 0 5 4 0 0 0 0 (108) TRP109 0 0 0 3 0 0 0 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqkaigwvlreyaktnpdvvweyvqnnelaplskreaikhikqny >5cld_A:ARM_repeat; title=ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING AN OXOCARBENIUM-INTERMEDIATE ANALOG AND A FREE 3-METHYLADENINE NUCLEOBASE organism=BACILLUS CEREUS DNA sequence DC(C13):DG(B12) DG(C14):DC(B11) DG(C15):DC(B10) DA(C16):DT(B9) DC(C17):DG(B8) DT(C18):DA(B7) DT(C19):DA(B5) DT(C20):DG(B4) DC(C21):DC(B3) DG(C22):DC(B2) DG(C23):DC(B1) chainA ( 29) TYR27 0 0 0 0 0 8 0 0 0 0 0 (185) LYS183 0 0 0 0 0 2 0 0 0 0 0 (217) ARG215 0 1 0 0 0 0 0 0 0 0 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskReaikhikqnyginn >5cle_A:ARM_repeat; title=ALKYLPURINE DNA GLYCOSYLASE ALKD BOUND TO DNA CONTAINING AN ABASIC- SITE ANALOG AND A FREE 3-METHYLADENINE NUCLEOBASE organism=BACILLUS CEREUS DNA sequence DC(B1):DG(C23) DC(B2):DG(C22) DC(B3):DC(C21) DG(B4):DT(C20) DA(B5):DT(C19) DA(B7):DT(C18) DG(B8):DC(C17) DT(B9):DA(C16) DC(B10):DG(C15) DC(B11):DG(C14) DG(B12):DC(C13) chainA ( 29) TYR27 0 0 0 0 0 8 0 0 0 0 0 (185) LYS183 0 0 0 0 0 1 0 0 0 0 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskreaikhikqnyginn >5clv_A: title=CRYSTAL STRUCTURE OF KORA-OPERATOR DNA COMPLEX (KORA-OA) organism=? DNA sequence DC(D2):DG(C19) DA(D3):DT(C18) DA(D4):DT(C17) DG(D5):DC(C16) DT(D6):DA(C15) DT(D7):DA(C14) DT(D8):DA(C13) DA(D9):DT(C12) DG(D10):DC(C11) DC(D11):DG(C10) DT(D12):DA(C9) DA(D13):DT(C8) DA(D14):DT(C7) DA(D15):DT(C6) DC(D16):DG(C5) DT(D17):DA(C4) DT(D18):DA(C3) DG(D19):DC(C2) chainA ( 46) THR47 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 47) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 ( 49) ALA50 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 51) SER52 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 52) GLN53 0 0 0 0 0 0 0 0 0 10 8 9 1 0 0 0 0 0 ( 56) ARG57 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 prot.sequence kkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweadakkk >5clv_AB: title=CRYSTAL STRUCTURE OF KORA-OPERATOR DNA COMPLEX (KORA-OA) organism=ESCHERICHIA COLI DNA sequence DC(D2):DG(C19) DA(D3):DT(C18) DA(D4):DT(C17) DG(D5):DC(C16) DT(D6):DA(C15) DT(D7):DA(C14) DT(D8):DA(C13) DA(D9):DT(C12) DG(D10):DC(C11) DC(D11):DG(C10) DT(D12):DA(C9) DA(D13):DT(C8) DA(D14):DT(C7) DA(D15):DT(C6) DC(D16):DG(C5) DT(D17):DA(C4) DT(D18):DA(C3) DG(D19):DC(C2) chainA ( 46) THR47 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 47) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 ( 49) ALA50 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 51) SER52 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 52) GLN53 0 0 0 0 0 0 0 0 0 10 8 9 1 0 0 0 0 0 ( 56) ARG57 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 chainB ( 46) THR47 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 47) ARG48 0 0 2 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ALA50 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 51) SER52 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) GLN53 0 0 0 0 0 1 8 7 10 2 0 0 0 0 0 0 0 0 ( 56) ARG57 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 prot.sequence kkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweadakkk/kkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweadakkkq >5clv_IJ: title=CRYSTAL STRUCTURE OF KORA-OPERATOR DNA COMPLEX (KORA-OA) organism=ESCHERICHIA COLI DNA sequence DC(L2):DG(K19) DA(L3):DT(K18) DA(L4):DT(K17) DG(L5):DC(K16) DT(L6):DA(K15) DT(L7):DA(K14) DT(L8):DA(K13) DA(L9):DT(K12) DG(L10):DC(K11) DC(L11):DG(K10) DT(L12):DA(K9) DA(L13):DT(K8) DA(L14):DT(K7) DA(L15):DT(K6) DC(L16):DG(K5) DT(L17):DA(K4) DT(L18):DA(K3) DG(L19):DC(K2) chainI ( 44) THR47 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 45) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 ( 47) ALA50 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 49) SER52 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 ( 50) GLN53 0 0 0 0 0 0 0 0 0 9 9 9 1 0 0 0 0 0 ( 54) ARG57 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 chainJ ( 45) THR47 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 46) ARG48 0 0 9 15 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ALA50 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 50) SER52 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN53 0 0 0 0 0 2 11 8 9 0 0 0 0 0 0 0 0 0 ( 55) ARG57 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 prot.sequence rltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedk/krltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedk >5clv_MN: title=CRYSTAL STRUCTURE OF KORA-OPERATOR DNA COMPLEX (KORA-OA) organism=ESCHERICHIA COLI DNA sequence DC(O2):DG(P19) DA(O3):DT(P18) DA(O4):DT(P17) DG(O5):DC(P16) DT(O6):DA(P15) DT(O7):DA(P14) DT(O8):DA(P13) DA(O9):DT(P12) DG(O10):DC(P11) DC(O11):DG(P10) DT(O12):DA(P9) DA(O13):DT(P8) DA(O14):DT(P7) DA(O15):DT(P6) DC(O16):DG(P5) DT(O17):DA(P4) DT(O18):DA(P3) DG(O19):DC(P2) chainM ( 46) THR47 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 47) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 3 19 2 0 0 ( 49) ALA50 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 51) SER52 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 ( 52) GLN53 0 0 0 0 0 0 0 0 0 10 8 8 1 0 0 0 0 0 ( 56) ARG57 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 chainN ( 46) THR47 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 47) ARG48 0 0 4 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ALA50 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 51) SER52 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) GLN53 0 0 0 0 0 1 8 5 10 0 0 0 0 0 0 0 0 0 ( 56) ARG57 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 prot.sequence kkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafed/kkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedk >5cm3_A: title=CRYSTAL STRUCTURE OF KORA, A PLASMID-ENCODED, GLOBAL TRANSCRIPTION REGULATOR organism=Escherichia coli DNA sequence DC(D2):DG(C19) DA(D3):DT(C18) DA(D4):DT(C17) DG(D5):DC(C16) DT(D6):DA(C15) DT(D7):DA(C14) DT(D8):DA(C13) DA(D9):DT(C12) DG(D10):DC(C11) DC(D11):DG(C10) DT(D12):DA(C9) DA(D13):DT(C8) DA(D14):DT(C7) DA(D15):DT(C6) DC(D16):DG(C5) DT(D17):DA(C4) DT(D18):DA(C3) DG(D19):DC(C2) chainA ( 47) THR47 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 48) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 6 0 0 ( 50) ALA50 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 52) SER52 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 ( 53) GLN53 0 0 0 0 0 0 0 0 0 9 6 7 0 0 0 0 0 0 ( 57) ARG57 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 prot.sequence mkkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweadakkkq >5cm3_AB: title=CRYSTAL STRUCTURE OF KORA, A PLASMID-ENCODED, GLOBAL TRANSCRIPTION REGULATOR organism=Escherichia coli DNA sequence DC(D2):DG(C19) DA(D3):DT(C18) DA(D4):DT(C17) DG(D5):DC(C16) DT(D6):DA(C15) DT(D7):DA(C14) DT(D8):DA(C13) DA(D9):DT(C12) DG(D10):DC(C11) DC(D11):DG(C10) DT(D12):DA(C9) DA(D13):DT(C8) DA(D14):DT(C7) DA(D15):DT(C6) DC(D16):DG(C5) DT(D17):DA(C4) DT(D18):DA(C3) DG(D19):DC(C2) chainA ( 47) THR47 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 48) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 6 0 0 ( 50) ALA50 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 52) SER52 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 ( 53) GLN53 0 0 0 0 0 0 0 0 0 9 6 7 0 0 0 0 0 0 ( 57) ARG57 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 chainB ( 47) THR47 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 48) ARG48 0 0 6 18 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ALA50 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 52) SER52 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) GLN53 0 0 0 0 0 0 7 6 9 1 0 0 0 0 0 0 0 0 ( 57) ARG57 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweadakkkq/mkkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweada >5cmx_H:Trypsin-like_serine_proteases; title=X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA THROMBIN AND A DUPLEX/QUADRUPLEX 31-MER DNA APTAMER organism=HOMO SAPIENS DNA sequence DA(A30) DC(A29) DT(A28) DG(A27) DC(A26) DG(A25) DG(A24) DG(A23) DG(A22) DT(A2) DG(A3) DA(A4) DC(A5) DG(A6) DT(A7) DA(A8) DG(A9) DG(A10) DT(A11) DT(A12) DG(A13) DG(A14) DT(A15) DG(A16) DT(A17) DG(A18) DT(A2):DA(A30) DG(A3):DC(A29) DA(A4):DT(A28) DC(A5):DG(A27) DG(A6):DC(A26) DT(A7):DG(A25) DA(A8):DT(A17) DG(A9):DG(A23) DG(A10):DG(A13) DT(A11) DT(A12) DG(A14):DG(A18) DT(A15) DG(A16):DG(A24) DG(A19):DG(A22) DT(A21) DT(A20) chainH ( 9) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 66) HIS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 10 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 7 0 0 0 22 10 0 ( 71) TYR76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 12 ( 72) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 ( 73) ARG77A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 27 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 11 0 0 0 4 4 0 ( 74) ASN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 75) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 ( 78) ILE82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence ivegsdaeIgmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkHsrtRYeRNIekIsmlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidq >5cnq_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF THE HOLLIDAY JUNCTION-RESOLVING ENZYME GEN1 (WT) IN COMPLEX WITH PRODUCT DNA, MG2+ AND MN2+ IONS organism=Chaetomium thermophilum DNA sequence DG(H17):DC(R14) DA(H18):DT(R13) DG(H19):DC(R12) DC(H20):DG(R11) DG(H21):DC(R10) DG(H22):DC(R9) DT(H23):DA(R8) DG(H24):DC(R7) DG(H25):DC(R6) DT(H26):DA(R5) DT(H27):DC(R4) DG(H28):DC(R3) DG(H29):DC(R2) DT(H30):DA(R1) chainA ( 3) LYS4 0 2 3 1 0 0 0 0 0 0 0 0 0 0 prot.sequence giKgiykeigsgerislcklaidhleqhnrplrlaidmaiwqfqiqaarggsnpairtlfyrfvrllslgihpifvfdgpnkpgvstamakrlirlfgftahdapgeaeaecayleqqgivdavlsedvdtimfgsrvtlrdwsseggppthvtlhdakkiaegpsgldregmvlvalmsgggipgcgikvacqaakagfgkelcaitewkqrllhelrtnesgffrtkhkaleipenfpnmevlryythpvvsspatierlrqefppsstvdiaglreftretfdwtfrpgaiklikvlapgllvqrcldryeestlvkgismrrehfstdatpelrvsfipaelvgldpgqepevkpfdpwqpdlawvpetilklgvpvtvedweegqrs >5co0_O: title=CRYSTAL STRUCTURE OF THE MTERF1 Y288A SUBSTITUTION BOUND TO THE TERMINATION SEQUENCE. organism=Homo sapiens DNA sequence DT(E1):DA(D22) DA(E2):DT(D21) DA(E3):DT(D20) DG(E4):DC(D19) DA(E5):DT(D18) DT(E6):DA(D17) DG(E7):DC(D16) DG(E8):DC(D15) DC(E9):DG(D14) DA(E10):DT(D13) DG(E11):DC(D12) DA(E12):DT(D11) DG(E13):DC(D10) DC(E14):DG(D9) DC(E15):DG(D8) DC(E16):DG(D7) DG(E17):DC(D6) DG(E18):DC(D5) DT(E19):DA(D4) DA(E20):DT(D3) DA(E21):DT(D2) DT(E22):DA(D1) chainO ( 56) TYR128 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG130 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) GLU165 0 0 0 0 0 0 1 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ARG169 0 0 0 0 0 15 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ARG195 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (127) ASN199 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 (130) ARG202 0 0 0 0 0 0 1 10 6 4 0 0 0 0 0 0 0 0 0 0 0 0 (168) LYS240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (170) PRO242 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (171) PHE243 0 0 0 0 0 0 0 0 0 0 32 12 0 0 0 0 0 0 0 0 0 0 (174) ILE246 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (179) ARG251 0 0 0 0 0 0 0 0 1 12 5 0 0 0 0 0 0 0 0 0 0 0 (211) ASP283 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (212) LEU284 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 (213) SER285 0 0 0 0 0 0 0 0 0 6 4 2 0 0 0 0 0 0 0 0 0 0 (216) ALA288 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (247) ASP319 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 (278) ARG350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 12 0 0 0 0 0 (281) ASP353 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 (312) SER384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (315) ARG387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 14 9 0 0 0 prot.sequence edllknlltmgvdidmarkrqpgvfhrmitneqdlkmfllskgaskeviasiisrYpRaitrtpenlskrwdlwrkivtsdleivnilerspEsffRsnnnlnlennikflysvgltrkclcRlltNapRtfsnsldlnkqmveflqaaglslghndpadfvrkiifKnPFilIqstkRvkanieflrstfnlnseellvlicgpgaeilDLSndAarrsyanikeklfslgcteeevqkfvlsypDviflaekkfndkidclmeenisisqiienpRvlDssistlksrikelvnagcnlstlnitllswSkkRyeaklkkls >5co8_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF THE HOLLIDAY JUNCTION-RESOLVING ENZYME GEN1 (WT) IN COMPLEX WITH PRODUCT DNA AND MG2+ ION organism=? DNA sequence DG(H17):DC(R14) DA(H18):DT(R13) DG(H19):DC(R12) DC(H20):DG(R11) DG(H21):DC(R10) DG(H22):DC(R9) DT(H23):DA(R8) DG(H24):DC(R7) DG(H25):DC(R6) DT(H26):DA(R5) DT(H27):DA(R4) DG(H28):DC(R3) DG(H29):DC(R2) DA(H30):DT(R1) chainA ( 3) LYS4 0 3 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence giKgiykeigsgerislcklaidhleqhnrplrlaidmaiwqfqiqaarggsnpairtlfyrfvrllslgihpifvfdgpnkpngvstamakrlirlfgftahdapgeaeaecayleqqgivdavlsedvdtimfgsrvtlrdwsseggppthvtlhdakkiaegpsgldregmvlvalmsggdgipgcgikvacqaakagfgkelcaitewkqrllhelrtnesgffrtkhkaleipenfpnmevlryythpvvsspatierlrqefppsstvdiaglreftretfdwtfrpgaiklikvlapgllvqrcldryeestlvkgismrrehfstdatpelrvsfipaelvgldpgqepevpfdpwqpdlawvpetilklgvpvtvedweegqrs >5cp2_B:Nucleotidyltransferase;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE LAMBDA L431A MUTANT- APOENZYME AND COMPLEX WITH 6 PAIRED DNA organism=Homo sapiens DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) chainB (135) GLN464 0 0 1 0 0 0 (176) TYR505 0 0 0 0 8 6 (181) ALA510 0 0 0 0 0 7 (184) ASN513 0 0 0 0 0 6 (185) ARG514 0 0 0 0 0 18 (188) ARG517 0 0 0 0 0 5 prot.sequence esvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvaithpdgrshrgifsrlldslrqegfltddlvsQeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >5cp6_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE WITH ADDUCTS FROM THE ANTICANCER COMPOUND, [(ETA6-5,8,9,10-TETRAHYDROANTHRACENE)RU(ETHYLENEDIAMINE)CL][PF6] organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 2) HIS39 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgiSskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaerVgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >5cp6_H:Histone-fold; title=NUCLEOSOME CORE PARTICLE WITH ADDUCTS FROM THE ANTICANCER COMPOUND, [(ETA6-5,8,9,10-TETRAHYDROANTHRACENE)RU(ETHYLENEDIAMINE)CL][PF6] organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >5cpi_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CONTAINING UNMETHYLATED SAT2R DNA organism=HOMO SAPIENS DNA sequence DA(I1):DT(J146) DT(I2):DA(J145) DC(I3):DG(J144) DC(I4):DG(J143) DA(I5):DT(J142) DA(I6):DT(J141) DA(I7):DT(J140) DT(I8):DA(J139) DG(I9):DC(J138) DG(I10):DC(J137) DA(I11):DT(J136) DT(I12):DA(J135) DT(I13):DA(J134) DC(I14):DG(J133) DG(I15):DC(J132) DA(I16):DT(J131) DA(I17):DT(J130) DT(I18):DA(J129) DG(I19):DC(J128) DG(I20):DC(J127) DA(I21):DT(J126) DA(I22):DT(J125) DT(I23):DA(J124) DC(I24):DG(J123) DA(I25):DT(J122) DT(I26):DA(J121) DT(I27):DA(J120) DG(I28):DC(J119) DA(I29):DT(J118) DA(I30):DT(J117) DT(I31):DA(J116) DG(I32):DC(J115) DG(I33):DC(J114) DA(I34):DT(J113) DA(I35):DT(J112) DA(I36):DT(J111) DT(I37):DA(J110) DG(I38):DC(J109) DA(I39):DT(J108) DA(I40):DT(J107) DT(I41):DA(J106) DG(I42):DC(J105) DG(I43):DC(J104) DA(I44):DT(J103) DA(I45):DT(J102) DT(I46):DA(J101) DC(I47):DG(J100) DT(I49):DA(J98) DT(I50):DA(J97) DG(I51):DC(J96) DT(I53):DA(J94) DT(I54):DA(J93) DG(I55):DC(J92) DG(I56):DC(J91) DA(I57):DT(J90) DC(I58):DG(J89) DT(I59):DA(J88) DC(I60):DG(J87) DA(I61):DT(J86) DA(I63):DT(J85) DT(I64):DA(J83) DG(I65):DC(J82) DA(I67):DT(J80) DA(I68):DT(J79) DT(I69):DA(J78) DT(I70):DA(J77) DT(I71):DA(J76) DT(I72):DA(J75) DC(I73):DG(J74) DG(I74):DC(J73) DA(I75):DT(J72) DA(I76):DT(J71) DC(I77):DG(J70) DA(I78):DT(J69) DG(I79):DC(J67) DC(I81):DG(J66) DT(I82):DA(J65) DC(I83):DG(J64) DA(I84):DT(J63) DA(I85):DT(J62) DA(I86):DT(J61) DT(I87):DA(J60) DG(I88):DC(J59) DG(I89):DC(J58) DA(I90):DT(J57) DA(I91):DT(J56) DT(I92):DA(J55) DC(I93):DG(J54) DT(I94):DA(J53) DT(I95):DA(J52) DC(I96):DG(J51) DG(I97):DC(J50) DA(I98):DT(J49) DA(I99):DT(J48) DT(I100):DA(J47) DG(I101):DC(J46) DG(I102):DC(J45) DA(I103):DT(J44) DT(I104):DA(J43) DT(I105):DA(J42) DG(I107):DC(J40) DA(I108):DT(J39) DA(I109):DT(J38) DT(I110):DA(J37) DG(I111):DC(J36) DT(I112):DA(J35) DA(I113):DT(J34) DA(I114):DT(J33) DT(I115):DA(J32) DC(I116):DG(J31) DA(I117):DT(J30) DT(I118):DA(J29) DT(I119):DA(J28) DT(I120):DA(J27) DT(I121):DA(J26) DG(I123):DC(J24) DA(I124):DT(J23) DA(I125):DT(J22) DG(I127):DC(J20) DG(I128):DC(J19) DA(I129):DT(J18) DT(I130):DA(J17) DT(I131):DA(J16) DC(I132):DG(J15) DG(I133):DC(J14) DA(I134):DT(J13) DA(I135):DT(J12) DT(I136):DA(J11) DG(I137):DC(J10) DG(I138):DC(J9) DA(I139):DT(J8) DA(I140):DT(J7) DT(I141):DA(J6) DC(I142):DG(J5) DG(I144):DC(J3) DA(I145):DT(J2) DT(I146):DA(J1) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 ( 12) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) TYR41 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 17) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHryrpgtvalReirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/nIqgitkpairRlarrggvkrisgliyEetrgvlkvflenvirdaVtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phrYrpgtvalreirryqkstelliRklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpaiRrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >5cpi_E:Histone-fold; title=NUCLEOSOME CONTAINING UNMETHYLATED SAT2R DNA organism=HOMO SAPIENS DNA sequence DA(J1):DT(I146) DT(J2):DA(I145) DC(J3):DG(I144) DG(J5):DC(I142) DA(J6):DT(I141) DT(J7):DA(I140) DT(J8):DA(I139) DC(J9):DG(I138) DC(J10):DG(I137) DA(J11):DT(I136) DT(J12):DA(I135) DT(J13):DA(I134) DC(J14):DG(I133) DG(J15):DC(I132) DA(J16):DT(I131) DA(J17):DT(I130) DT(J18):DA(I129) DC(J19):DG(I128) DC(J20):DG(I127) DT(J22):DA(I125) DT(J23):DA(I124) DC(J24):DG(I123) DA(J26):DT(I121) DA(J27):DT(I120) DA(J28):DT(I119) DA(J29):DT(I118) DT(J30):DA(I117) DG(J31):DC(I116) DA(J32):DT(I115) DT(J33):DA(I114) DT(J34):DA(I113) DA(J35):DT(I112) DC(J36):DG(I111) DA(J37):DT(I110) DT(J38):DA(I109) DT(J39):DA(I108) DC(J40):DG(I107) DA(J42):DT(I105) DA(J43):DT(I104) DT(J44):DA(I103) DC(J45):DG(I102) DC(J46):DG(I101) DA(J47):DT(I100) DT(J48):DA(I99) DT(J49):DA(I98) DC(J50):DG(I97) DG(J51):DC(I96) DA(J52):DT(I95) DA(J53):DT(I94) DG(J54):DC(I93) DA(J55):DT(I92) DT(J56):DA(I91) DT(J57):DA(I90) DC(J58):DG(I89) DC(J59):DG(I88) DA(J60):DT(I87) DT(J61):DA(I86) DT(J62):DA(I85) DT(J63):DA(I84) DG(J64):DC(I83) DA(J65):DT(I82) DG(J66):DC(I81) DC(J67):DG(I79) DT(J69):DA(I78) DG(J70):DC(I77) DT(J71):DA(I76) DT(J72):DA(I75) DC(J73):DG(I74) DG(J74):DC(I73) DA(J75):DT(I72) DA(J76):DT(I71) DA(J77):DT(I70) DA(J78):DT(I69) DT(J79):DA(I68) DT(J80):DA(I67) DC(J82):DG(I65) DA(J83):DT(I64) DT(J85):DA(I63) DT(J86):DA(I61) DG(J87):DC(I60) DA(J88):DT(I59) DG(J89):DC(I58) DT(J90):DA(I57) DC(J91):DG(I56) DC(J92):DG(I55) DA(J93):DT(I54) DA(J94):DT(I53) DC(J96):DG(I51) DA(J97):DT(I50) DA(J98):DT(I49) DG(J100):DC(I47) DA(J101):DT(I46) DT(J102):DA(I45) DT(J103):DA(I44) DC(J104):DG(I43) DC(J105):DG(I42) DA(J106):DT(I41) DT(J107):DA(I40) DT(J108):DA(I39) DC(J109):DG(I38) DA(J110):DT(I37) DT(J111):DA(I36) DT(J112):DA(I35) DT(J113):DA(I34) DC(J114):DG(I33) DC(J115):DG(I32) DA(J116):DT(I31) DT(J117):DA(I30) DT(J118):DA(I29) DC(J119):DG(I28) DA(J120):DT(I27) DA(J121):DT(I26) DT(J122):DA(I25) DG(J123):DC(I24) DA(J124):DT(I23) DT(J125):DA(I22) DT(J126):DA(I21) DC(J127):DG(I20) DC(J128):DG(I19) DA(J129):DT(I18) DT(J130):DA(I17) DT(J131):DA(I16) DC(J132):DG(I15) DG(J133):DC(I14) DA(J134):DT(I13) DA(J135):DT(I12) DT(J136):DA(I11) DC(J137):DG(I10) DC(J138):DG(I9) DA(J139):DT(I8) DT(J140):DA(I7) DT(J141):DA(I6) DT(J142):DA(I5) DG(J143):DC(I4) DG(J144):DC(I3) DA(J145):DT(I2) DT(J146):DA(I1) chainE ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 26) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phrYrpgtvalreirryqkstelliRklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >5cpj_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CONTAINING METHYLATED SAT2R DNA organism=HOMO SAPIENS DNA sequence DA(J1):DT(I146) DT(J2):DA(I145) DC(J3):DG(I144) DA(J4):DT(I143) DG(J5):DC(I142) DA(J6):DT(I141) DT(J7):DA(I140) DT(J8):DA(I139) DC(J9):DG(I138) DC(J10):DG(I137) DA(J11):DT(I136) DT(J12):DA(I135) DT(J13):DA(I134) DG(J15):DG(I133) DA(J16):DT(I131) DA(J17):DT(I130) DT(J18):DA(I129) DC(J19):DG(I128) DC(J20):DG(I127) DA(J21):DT(I126) DT(J22):DA(I125) DT(J23):DA(I124) DG(J25):DG(I123) DA(J26):DT(I121) DA(J27):DT(I120) DA(J28):DT(I119) DA(J29):DT(I118) DT(J30):DA(I117) DG(J31):DC(I116) DA(J32):DT(I115) DT(J33):DA(I114) DT(J34):DA(I113) DA(J35):DT(I112) DC(J36):DG(I111) DA(J37):DT(I110) DT(J38):DA(I109) DT(J39):DA(I108) DG(J41):DG(I107) DA(J42):DT(I105) DA(J43):DT(I104) DT(J44):DA(I103) DC(J45):DG(I102) DC(J46):DG(I101) DA(J47):DT(I100) DT(J48):DA(I99) DT(J49):DA(I98) DG(J51):DG(I97) DA(J52):DT(I95) DA(J53):DT(I94) DG(J54):DC(I93) DA(J55):DT(I92) DT(J56):DA(I91) DT(J57):DA(I90) DC(J58):DG(I89) DC(J59):DG(I88) DA(J60):DT(I87) DT(J61):DA(I86) DT(J62):DA(I85) DT(J63):DA(I84) DG(J64):DC(I83) DA(J65):DT(I82) DG(J66):DC(I81) DC(J67):DG(I80) DC(J68):DG(I79) DT(J69):DA(I78) DG(J70):DC(I77) DT(J71):DA(I76) DT(J72):DA(I75) DG(J74):DG(I74) DA(J75):DT(I72) DA(J76):DT(I71) DA(J77):DT(I70) DA(J78):DT(I69) DT(J79):DA(I68) DT(J80):DA(I67) DC(J81):DG(I66) DC(J82):DG(I65) DA(J83):DT(I64) DT(J84):DA(I63) DT(J85):DA(I62) DT(J86):DA(I61) DG(J87):DC(I60) DA(J88):DT(I59) DG(J89):DC(I58) DT(J90):DA(I57) DC(J91):DG(I56) DC(J92):DG(I55) DA(J93):DT(I54) DA(J94):DT(I53) DC(J95):DG(I52) DC(J96):DG(I51) DA(J97):DT(I50) DA(J98):DT(I49) DT(J99):DA(I48) DG(J100):DC(I47) DA(J101):DT(I46) DT(J102):DA(I45) DT(J103):DA(I44) DC(J104):DG(I43) DC(J105):DG(I42) DA(J106):DT(I41) DT(J107):DA(I40) DT(J108):DA(I39) DC(J109):DG(I38) DA(J110):DT(I37) DT(J111):DA(I36) DT(J112):DA(I35) DT(J113):DA(I34) DC(J114):DG(I33) DC(J115):DG(I32) DA(J116):DT(I31) DT(J117):DA(I30) DT(J118):DA(I29) DC(J119):DG(I28) DA(J120):DT(I27) DA(J121):DT(I26) DT(J122):DA(I25) DG(J123):DC(I24) DA(J124):DT(I23) DT(J125):DA(I22) DT(J126):DA(I21) DC(J127):DG(I20) DC(J128):DG(I19) DA(J129):DT(I18) DT(J130):DA(I17) DT(J131):DA(I16) DG(J133):DG(I15) DA(J134):DT(I13) DA(J135):DT(I12) DT(J136):DA(I11) DC(J137):DG(I10) DC(J138):DG(I9) DA(J139):DT(I8) DT(J140):DA(I7) DT(J141):DA(I6) DT(J142):DA(I5) DG(J143):DC(I4) DG(J144):DC(I3) DA(J145):DT(I2) DT(J146):DA(I1) chainA ( 1) TYR41 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence YrpgtvalreirryqkstellirKlpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/NiqgitkpairrlarrggvkrisGliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rKVLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvfleNvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/rkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5cpk_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CONTAINING METHYLATED SAT2L DNA organism=HOMO SAPIENS DNA sequence DA(I1):DT(J145) DT(I2):DA(J144) DC(I3):DG(J143) DA(I4):DT(J142) DT(I5):DA(J141) DG(I6):DC(J140) DG(I7):DC(J139) DA(I8):DT(J138) DA(I9):DT(J137) DT(I10):DA(J136) DC(I11):DG(J135) DA(I12):DT(J134) DT(I13):DA(J132) DG(I15):DC(J131) DA(I16):DT(J130) DA(I17):DT(J129) DT(I18):DA(J128) DG(I19):DC(J127) DG(I20):DC(J126) DA(I21):DT(J125) DA(I22):DT(J124) DA(I23):DT(J123) DT(I24):DA(J122) DG(I25):DC(J121) DA(I26):DT(J120) DA(I27):DC(J119) DT(I28):DT(J118) DG(I29):DC(J117) DG(I30):DC(J116) DA(I31):DT(J115) DA(I32):DT(J114) DT(I33):DA(J113) DC(I34):DG(J112) DA(I35):DT(J111) DT(I36):DA(J110) DT(I37):DA(J109) DG(I38):DC(J107) DT(I40):DA(J106) DT(I41):DA(J105) DG(I42):DC(J104) DG(I43):DC(J103) DA(I44):DT(J102) DC(I45):DG(J101) DC(I47):DG(J99) DA(I48):DT(J98) DA(I49):DT(J97) DA(I50):DT(J96) DT(I51):DA(J95) DG(I52):DC(J94) DG(I53):DC(J93) DA(I54):DT(J92) DA(I55):DT(J91) DT(I56):DA(J90) DT(I57):DA(J89) DT(I58):DA(J88) DT(I59):DA(J87) 5CM(I60):DG(J86) DG(I61):5CM(J85) DA(I62):DT(J84) DA(I63):DT(J83) DC(I64):DG(J82) DA(I65):DT(J81) DG(I66):DC(J80) DG(I67):DC(J79) DC(I68):DG(J78) DT(I69):DA(J77) DC(I70):DG(J76) DA(I71):DT(J75) DA(I72):DT(J74) DA(I73):DT(J73) DT(I74):DA(J72) DG(I75):DC(J71) DG(I76):DC(J70) DA(I77):DT(J69) DA(I78):DT(J68) DT(I79):DA(J67) DC(I80):DG(J66) DT(I81):DA(J65) DT(I82):DA(J64) 5CM(I83):DG(J63) DG(I84):5CM(J62) DA(I85):DT(J61) DA(I86):DT(J60) DT(I87):DA(J59) DG(I88):DC(J58) DG(I89):DC(J57) DA(I90):DT(J56) DT(I91):DA(J55) DT(I92):DA(J54) 5CM(I93):DG(J53) DG(I94):5CM(J52) DA(I95):DT(J51) DA(I96):DT(J50) DT(I97):DA(J49) DG(I98):DC(J48) DT(I99):DA(J47) DA(I100):DT(J46) DA(I101):DT(J45) DT(I102):DA(J44) DC(I103):DG(J43) DA(I104):DT(J42) DT(I105):DA(J41) DT(I106):DA(J40) DT(I108):DA(J39) 5CM(I109):DG(J37) DG(I110):5CM(J36) DA(I111):DT(J34) DT(I113):DA(J33) DG(I114):DC(J32) DG(I115):DC(J31) DA(I116):DT(J30) DT(I117):DA(J29) DT(I118):DA(J28) 5CM(I119):DG(J27) DG(I120):5CM(J26) DA(I121):DT(J25) DA(I122):DT(J24) DT(I123):DA(J23) DG(I124):DC(J22) DG(I125):DC(J21) DA(I126):DT(J20) DA(I127):DT(J19) DT(I128):DA(J18) DC(I129):DG(J17) DT(I130):DA(J16) DT(I131):DA(J15) 5CM(I132):DG(J14) DG(I133):5CM(J13) DA(I134):DT(J12) DA(I135):DT(J11) DT(I136):DA(J10) DG(I137):DC(J9) DG(I138):DC(J8) DA(I139):DT(J7) DA(I140):DT(J6) DA(I141):DT(J5) DT(I142):DA(J4) DG(I143):DC(J3) DA(I144):DT(J2) DT(I145):DA(J1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) HIS39 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) LYS75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/dnIqgitkpairrlarrggvkrisgliYeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/srkesysiyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kesysiyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5cpk_C:Histone-fold; title=NUCLEOSOME CONTAINING METHYLATED SAT2L DNA organism=? DNA sequence DA(I1):DT(J145) DT(I2):DA(J144) DC(I3):DG(J143) DA(I4):DT(J142) DT(I5):DA(J141) DG(I6):DC(J140) DG(I7):DC(J139) DA(I8):DT(J138) DA(I9):DT(J137) DT(I10):DA(J136) DC(I11):DG(J135) DA(I12):DT(J134) DT(I13):DA(J132) DG(I15):DC(J131) DA(I16):DT(J130) DA(I17):DT(J129) DT(I18):DA(J128) DG(I19):DC(J127) DG(I20):DC(J126) DA(I21):DT(J125) DA(I22):DT(J124) DA(I23):DT(J123) DT(I24):DA(J122) DG(I25):DC(J121) DA(I26):DT(J120) DA(I27):DC(J119) DT(I28):DT(J118) DG(I29):DC(J117) DG(I30):DC(J116) DA(I31):DT(J115) DA(I32):DT(J114) DT(I33):DA(J113) DC(I34):DG(J112) DA(I35):DT(J111) DT(I36):DA(J110) DT(I37):DA(J109) DG(I38):DC(J107) DT(I40):DA(J106) DT(I41):DA(J105) DG(I42):DC(J104) DG(I43):DC(J103) DA(I44):DT(J102) DC(I45):DG(J101) DC(I47):DG(J99) DA(I48):DT(J98) DA(I49):DT(J97) DA(I50):DT(J96) DT(I51):DA(J95) DG(I52):DC(J94) DG(I53):DC(J93) DA(I54):DT(J92) DA(I55):DT(J91) DT(I56):DA(J90) DT(I57):DA(J89) DT(I58):DA(J88) DT(I59):DA(J87) 5CM(I60):DG(J86) DG(I61):5CM(J85) DA(I62):DT(J84) DA(I63):DT(J83) DC(I64):DG(J82) DA(I65):DT(J81) DG(I66):DC(J80) DG(I67):DC(J79) DC(I68):DG(J78) DT(I69):DA(J77) DC(I70):DG(J76) DA(I71):DT(J75) DA(I72):DT(J74) DA(I73):DT(J73) DT(I74):DA(J72) DG(I75):DC(J71) DG(I76):DC(J70) DA(I77):DT(J69) DA(I78):DT(J68) DT(I79):DA(J67) DC(I80):DG(J66) DT(I81):DA(J65) DT(I82):DA(J64) 5CM(I83):DG(J63) DG(I84):5CM(J62) DA(I85):DT(J61) DA(I86):DT(J60) DT(I87):DA(J59) DG(I88):DC(J58) DG(I89):DC(J57) DA(I90):DT(J56) DT(I91):DA(J55) DT(I92):DA(J54) 5CM(I93):DG(J53) DG(I94):5CM(J52) DA(I95):DT(J51) DA(I96):DT(J50) DT(I97):DA(J49) DG(I98):DC(J48) DT(I99):DA(J47) DA(I100):DT(J46) DA(I101):DT(J45) DT(I102):DA(J44) DC(I103):DG(J43) DA(I104):DT(J42) DT(I105):DA(J41) DT(I106):DA(J40) DT(I108):DA(J39) 5CM(I109):DG(J37) DG(I110):5CM(J36) DA(I111):DT(J34) DT(I113):DA(J33) DG(I114):DC(J32) DG(I115):DC(J31) DA(I116):DT(J30) DT(I117):DA(J29) DT(I118):DA(J28) 5CM(I119):DG(J27) DG(I120):5CM(J26) DA(I121):DT(J25) DA(I122):DT(J24) DT(I123):DA(J23) DG(I124):DC(J22) DG(I125):DC(J21) DA(I126):DT(J20) DA(I127):DT(J19) DT(I128):DA(J18) DC(I129):DG(J17) DT(I130):DA(J16) DT(I131):DA(J15) 5CM(I132):DG(J14) DG(I133):5CM(J13) DA(I134):DT(J12) DA(I135):DT(J11) DT(I136):DA(J10) DG(I137):DC(J9) DG(I138):DC(J8) DA(I139):DT(J7) DA(I140):DT(J6) DA(I141):DT(J5) DT(I142):DA(J4) DG(I143):DC(J3) DA(I144):DT(J2) DT(I145):DA(J1) chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >5cqq_A: title=CRYSTAL STRUCTURE OF THE DROSOPHILA ZESTE DNA BINDING DOMAIN IN COMPLEX WITH DNA organism=Drosophila melanogaster DNA sequence DC(C1):DG(D19) DT(C2):DA(D18) DG(C3):DC(D17) DT(C4):DA(D16) DT(C5):DA(D15) DT(C6):DA(D14) DT(C7):DA(D13) DC(C8):DG(D12) DC(C9):DG(D11) DA(C10):DT(D10) DC(C11):DG(D9) DT(C12):DA(D8) DC(C13):DG(D7) DG(C14):DC(D6) DT(C15):DA(D5) DT(C16):DA(D4) DT(C17):DA(D3) DT(C18):DA(D2) DT(C19):DA(D1) chainA ( 4) ARG55 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 1 0 0 0 ( 61) LYS117 0 0 0 0 0 0 0 0 0 2 8 15 0 0 0 0 0 0 0 ( 64) LEU120 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 65) ASN121 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 ( 68) LEU124 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 ( 69) ARG125 0 0 0 0 0 0 0 0 0 0 0 4 13 9 0 0 0 0 0 prot.sequence ltpRftaeekevlytlfhlheevidikhrkysvretwdkivkdfnshphvsamrnikqiqKfwLNsrLRkqypy >5cr0_A:Nucleotidyltransferase;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE LAMBDA L431A MUTANT- MGDCTP BINARY AND COMPLEX WITH 6 PAIRED DNA organism=Homo sapiens DNA sequence DG(T6):DC(P6) DT(T7):DA(P5) DA(T8):DT(P4) DC(T9):DG(P3) DT(T10):DA(P2) DG(T11):DC(P1) chainA (135) GLN464 0 0 0 1 0 0 (176) TYR505 4 8 0 0 0 0 (181) ALA510 7 0 0 0 0 0 (184) ASN513 6 0 0 0 0 0 (185) ARG514 20 0 0 0 0 0 (188) ARG517 13 4 0 0 0 0 (200) GLU529 0 1 0 0 0 0 prot.sequence esvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvaithpdgrshrgifsrlldslrqegfltddlvsQeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >5cr2_A:Cell_growth_inhibitor/plasmid_maintenance_toxic_component; title=E. COLI MAZF IN COMPLEX WITH SINGLE STRAND DNA SUBSTRATE ANALOG organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DA(D1) DU(D2) DA(D3) DC(D4) DA(D5) DU(D6) DA(D7) chainA ( 13) TRP14 0 3 0 0 0 0 0 ( 19) THR20 0 0 1 0 0 0 0 ( 22) SER23 0 0 0 6 5 0 0 ( 24) GLN25 0 0 6 10 3 0 0 ( 25) ALA26 0 0 1 0 0 0 0 ( 28) ARG29 0 0 2 0 0 0 0 ( 29) PRO30 0 12 0 0 0 0 0 ( 50) CYS51 0 1 0 0 0 0 0 ( 52) THR53 0 7 0 0 0 0 0 ( 55) LYS56 0 0 0 1 5 4 0 ( 57) TYR58 0 0 0 0 0 5 0 ( 60) GLU61 0 0 0 0 0 1 0 ( 67) GLU68 0 7 0 0 0 0 0 ( 68) ARG69 0 11 0 0 0 0 0 ( 73) LEU74 0 0 0 0 1 0 0 ( 76) GLN77 0 0 0 0 1 0 0 prot.sequence vsryvpdmgdliWvdfdpTkgSeQAghRPavvlspfmynnktgmclcvpCtTqsKgYpfEvvlsgqERdgvaLadQvksiawrargatkkgtvapeelqlikakinvligh >5crj_O: title=CRYSTAL STRUCTURE OF THE MTERF1 F322A SUBSTITUTION BOUND TO THE TERMINATION SEQUENCE. organism=Homo sapiens DNA sequence DA(D1):DT(E22) DT(D2):DA(E21) DT(D3):DA(E20) DA(D4):DT(E19) DC(D5):DG(E18) DC(D6):DG(E17) DG(D7):DC(E16) DG(D8):DC(E15) DG(D9):DC(E14) DC(D10):DG(E13) DT(D11):DA(E12) DC(D12):DG(E11) DT(D13):DA(E10) DG(D14):DC(E9) DC(D15):DG(E8) DC(D16):DG(E7) DA(D17):DT(E6) DT(D18):DA(E5) DC(D19):DG(E4) DT(D20):DA(E3) DT(D21):DA(E2) DA(D22):DT(E1) chainO ( 56) TYR128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 58) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 ( 87) ILE159 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 90) ARG162 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 ( 93) GLU165 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 ( 97) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 15 0 0 0 0 0 (123) ARG195 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (126) THR198 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (127) ASN199 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 (130) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 2 7 11 3 0 0 0 0 0 0 (168) LYS240 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) PRO242 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (171) PHE243 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 (175) GLN247 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (179) ARG251 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 (208) GLU280 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 (212) LEU284 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (213) SER285 0 0 0 0 0 0 0 0 0 0 6 3 1 0 0 0 0 0 0 0 0 0 (216) TYR288 0 0 0 0 0 0 0 0 0 0 45 0 0 0 0 0 0 0 0 0 0 0 (247) ASP319 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG350 0 0 0 0 0 11 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ASP353 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER384 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) ARG387 0 0 0 6 13 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence edllknlltmgvdidmarkrqpgvfhrmitneqdlkmfllskgaskeviasiisrYpRaitrtpenlskrwdlwrkivtsdleivnIleRspEsffRsnnnlnlennikflysvgltrkclcRllTNapRtfsnsldlnkqmveflqaaglslghndpadfvrkiifKnPFiliQstkRvkanieflrstfnlnseellvlicgpgaEildLSndYarrsyanikeklfslgcteeevqkfvlsypDvialaekkfndkidclmeenisisqiienpRvlDssistlksrikelvnagcnlstlnitllswSkkRyeaklkkls >5crk_O: title=CRYSTAL STRUCTURE OF THE MTERF1 F243A SUBSTITUTION BOUND TO THE TERMINATION SEQUENCE. organism=Homo sapiens DNA sequence DT(E1):DA(D22) DA(E2):DT(D21) DA(E3):DT(D20) DG(E4):DC(D19) DA(E5):DT(D18) DT(E6):DA(D17) DG(E7):DC(D16) DG(E8):DC(D15) DC(E9):DG(D14) DA(E10):DT(D13) DG(E11):DC(D12) DA(E12):DT(D11) DG(E13):DC(D10) DC(E14):DG(D9) DC(E15):DG(D8) DC(E16):DG(D7) DG(E17):DC(D6) DG(E18):DC(D5) DT(E19):DA(D4) DA(E20):DT(D3) DA(E21):DT(D2) DT(E22):DA(D1) chainO ( 56) TYR128 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG130 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG162 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 ( 93) GLU165 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ARG169 0 0 0 0 0 16 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) THR198 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (127) ASN199 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (130) ARG202 0 0 0 0 0 0 5 13 6 1 0 0 0 0 0 0 0 0 0 0 0 0 (171) ALA243 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (174) ILE246 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (175) GLN247 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 (179) ARG251 0 0 0 0 0 0 0 0 2 6 10 0 0 0 0 0 0 0 0 0 0 0 (211) ASP283 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 (212) LEU284 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (213) SER285 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 (216) TYR288 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 (245) TYR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (250) PHE322 0 0 0 0 0 0 0 0 0 0 0 26 5 0 0 0 0 0 0 0 0 0 (278) ARG350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 15 0 0 0 0 0 (281) ASP353 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 (312) SER384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (315) ARG387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 13 7 0 0 0 prot.sequence edllknlltmgvdidmarkrqpgvfhrmitneqdlkmfllskgaskeviasiisrYpRaitrtpenlskrwdlwrkivtsdleivnileRspEsffRsnnnlnlennikflysvgltrkclcrllTNapRtfsnsldlnkqmveflqaaglslghndpadfvrkiifknpAilIQstkRvkanieflrstfnlnseellvlicgpgaeilDLSndYarrsyanikeklfslgcteeevqkfvlsYpdviFlaekkfndkidclmeenisisqiienpRvlDssistlksrikelvnagcnlstlnitllswSkkRyeaklkkls >5crx_A:lambda_integrase-like,_N-terminal_domain;DNA_breaking-rejoining_enzymes; title=ASYMMETRIC DNA-BENDING IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION SYNAPSE organism=Enterobacteria phage P1 DNA sequence DT(D3):DA(C34) DA(D4):DT(C33) DA(D5):DT(C32) DC(D6):DG(C31) DT(D7):DA(C30) DT(D8):DA(C29) DC(D9):DG(C28) DG(D10):DC(C27) DT(D11):DA(C26) DA(D12):DT(C25) DT(D13):DA(C24) DA(D14):DT(C23) DG(D15):DC(C22) DC(D16):DG(C21) DA(D17):DT(C20) DT(D18):DA(C19) DA(D19):DT(C18) DT(D20):DA(C17) DG(D21):DC(C16) DC(D22):DG(C15) DT(D23):DA(C14) DA(D24):DT(C13) DT(D25):DA(C12) DA(D26):DT(C11) DC(D27):DG(C10) DG(D28):DC(C9) DA(D29):DT(C8) DA(D30):DT(C7) DG(D31):DC(C6) DT(D32):DA(C5) DT(D33):DA(C4) DA(D34):DT(C3) chainA ( 22) HIS40 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) THR41 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) MET44 0 0 0 0 0 0 0 0 4 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER47 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) LYS86 0 0 0 0 0 0 0 0 0 0 0 11 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR87 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN90 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) GLN94 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) ARG241 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) LYS244 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) SER257 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ARG259 0 0 0 0 0 8 15 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) GLU262 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG282 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tsdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdageraKqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtrnldsetgamvrlle >5crx_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=ASYMMETRIC DNA-BENDING IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION SYNAPSE organism=Enterobacteria phage P1 DNA sequence DT(D3):DA(C34) DA(D4):DT(C33) DA(D5):DT(C32) DC(D6):DG(C31) DT(D7):DA(C30) DT(D8):DA(C29) DC(D9):DG(C28) DG(D10):DC(C27) DT(D11):DA(C26) DA(D12):DT(C25) DT(D13):DA(C24) DA(D14):DT(C23) DG(D15):DC(C22) DC(D16):DG(C21) DA(D17):DT(C20) DT(D18):DA(C19) DA(D19):DT(C18) DT(D20):DA(C17) DG(D21):DC(C16) DC(D22):DG(C15) DT(D23):DA(C14) DA(D24):DT(C13) DT(D25):DA(C12) DA(D26):DT(C11) DC(D27):DG(C10) DG(D28):DC(C9) DA(D29):DT(C8) DA(D30):DT(C7) DG(D31):DC(C6) DT(D32):DA(C5) DT(D33):DA(C4) DA(D34):DT(C3) chainA ( 22) HIS40 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) THR41 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) MET44 0 0 0 0 0 0 0 0 4 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER47 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) LYS86 0 0 0 0 0 0 0 0 0 0 0 11 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR87 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN90 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) GLN94 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) ARG241 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) LYS244 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) SER257 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ARG259 0 0 0 0 0 8 15 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) GLU262 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG282 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 ( 23) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 26) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 4 0 0 0 0 0 0 0 0 ( 29) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 68) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 10 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 72) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 (183) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 (223) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 (225) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 (226) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 (239) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 (241) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 19 8 1 0 0 0 0 (244) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 (264) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 prot.sequence tsdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdageraKqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtrnldsetgamvrlle/tsdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqagg >5cy1_AB:Resolvase-like;Homeodomain-like; title=TN3 RESOLVASE - SITE III COMPLEX CRYSTAL FORM I organism=Escherichia coli DNA sequence DA(D2):DT(C30) DA(D3):DT(C29) DT(D4):DA(C28) DG(D5):DC(C27) DT(D6):DA(C26) DA(D7):DT(C25) DC(D8):DG(C24) DC(D9):DG(C23) DT(D10):DA(C22) DT(D11):DA(C21) DA(D12):DT(C20) DA(D13):DT(C19) DA(D14):DT(C18) DT(D15):DA(C17) DC(D16):DG(C16) DG(D17):DC(C15) DA(D18):DT(C14) DA(D19):DT(C13) DT(D20):DA(C12) DA(D21):DT(C11) DT(D22):DA(C10) DC(D23):DG(C9) DA(D24):DT(C8) DG(D25):DC(C7) DA(D26):DT(C6) DC(D27):DG(C5) DA(D28):DT(C4) DC(D29):DG(C3) DG(D30):DC(C2) chainA (137) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 4 0 0 0 0 0 0 0 0 0 (168) ALA171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (169) ARG172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 13 0 0 (170) SER173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 3 0 0 0 0 0 (171) THR174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (173) TYR176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 (174) LYS177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 chainB (118) LEU123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) THR126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 18 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ASN127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 9 15 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) ARG142 0 0 0 0 0 0 0 0 0 2 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) THR162 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ALA171 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ARG172 0 0 9 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) SER173 0 0 0 0 0 3 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) THR174 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) TYR176 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) LYS177 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrifgyarvstsqqsldiqiralkdagvkanriftdkastdregldllrmkveegdvilvkkldrlgrdtadmiqlikefdaqgvavrfiddgistdgdmgqmvvtilsavaqaerrrilertnegrqeaklkgikFgRrrtvdrnvvltlhqkgtgateiahqlsiARSTvYKilederasa/mrifgyarvstsqqsldiqiralkdagvkanriftdkadregldllrmkveegdvilvkkldrlgrdtadmiqlikefdaqgvavrfiddgistdgdmgqmvvtilsavaqaerrriLerTNegRqeaklkgikFgRrrtvdrnvvltlhqkgtgaTeiahqlsiARSTvYKilederas >5cy1_B:Resolvase-like;Homeodomain-like; title=TN3 RESOLVASE - SITE III COMPLEX CRYSTAL FORM I organism=Escherichia coli DNA sequence DC(C2):DG(D30) DG(C3):DC(D29) DT(C4):DA(D28) DG(C5):DC(D27) DT(C6):DA(D26) DC(C7):DG(D25) DT(C8):DA(D24) DG(C9):DC(D23) DA(C10):DT(D22) DT(C11):DA(D21) DA(C12):DT(D20) DT(C13):DA(D19) DT(C14):DA(D18) DC(C15):DG(D17) DG(C16):DC(D16) DA(C17):DT(D15) DT(C18):DA(D14) DT(C19):DA(D13) DT(C20):DA(D12) DA(C21):DT(D11) DA(C22):DT(D10) DG(C23):DC(D9) DG(C24):DC(D8) DT(C25):DA(D7) DA(C26):DT(D6) DC(C27):DG(D5) DA(C28):DT(D4) DT(C29):DA(D3) DT(C30):DA(D2) chainB (118) LEU123 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) THR126 0 0 0 0 0 0 0 0 0 0 0 0 0 18 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ASN127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 15 9 0 0 0 0 0 0 0 0 0 0 0 0 (135) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 (157) THR162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (166) ALA171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (167) ARG172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 9 0 0 (168) SER173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 3 0 0 0 0 0 (169) THR174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (171) TYR176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 (172) LYS177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 prot.sequence mrifgyarvstsqqsldiqiralkdagvkanriftdkadregldllrmkveegdvilvkkldrlgrdtadmiqlikefdaqgvavrfiddgistdgdmgqmvvtilsavaqaerrriLerTNegRqeaklkgikFgRrrtvdrnvvltlhqkgtgaTeiahqlsiARSTvYKilederas >5cy2_A:Resolvase-like;Homeodomain-like; title=TN3 RESOLVASE - SITE III COMPLEX CRYSTAL FORM II organism=Escherichia coli DNA sequence DT(D4):DA(C28) DG(D5):DC(C27) DT(D6):DA(C26) DA(D7):DT(C25) DC(D8):DG(C24) DC(D9):DG(C23) DT(D10):DA(C22) DT(D11):DA(C21) DA(D12):DT(C20) DA(D13):DT(C19) DA(D14):DT(C18) DT(D15):DA(C17) DC(D16):DG(C16) DG(D17):DC(C15) DA(D18):DT(C14) DA(D19):DT(C13) DT(D20):DA(C12) DA(D21):DT(C11) DT(D22):DA(C10) DC(D23):DG(C9) DA(D24):DT(C8) DG(D25):DC(C7) DA(D26):DT(C6) DC(D27):DG(C5) DA(D28):DT(C4) chainA (131) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 (133) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 7 1 0 0 0 0 0 0 (162) ALA171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (163) ARG172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 11 (164) SER173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 4 0 0 0 (165) THR174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (167) TYR176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 (168) LYS177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 prot.sequence mrifgyarvstsqqsldiqiralkdagvkanriftdkastdregldllrmkveegdvilvkkldrlgrdtadmiqlikefdaqgvavrfiddgistdgdmgqmvvtilsavaqaerrrilertnegkgikFgRrrtvdrnvvltlhqkgtgateiahqlsiARSTvYKilederasa >5cy2_AB:Resolvase-like;Homeodomain-like; title=TN3 RESOLVASE - SITE III COMPLEX CRYSTAL FORM II organism=Escherichia coli DNA sequence DT(C4):DA(D28) DG(C5):DC(D27) DT(C6):DA(D26) DC(C7):DG(D25) DT(C8):DA(D24) DG(C9):DC(D23) DA(C10):DT(D22) DT(C11):DA(D21) DA(C12):DT(D20) DT(C13):DA(D19) DT(C14):DA(D18) DC(C15):DG(D17) DG(C16):DC(D16) DA(C17):DT(D15) DT(C18):DA(D14) DT(C19):DA(D13) DT(C20):DA(D12) DA(C21):DT(D11) DA(C22):DT(D10) DG(C23):DC(D9) DG(C24):DC(D8) DT(C25):DA(D7) DA(C26):DT(D6) DC(C27):DG(D5) DA(C28):DT(D4) chainA (131) PHE140 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) ARG142 0 0 0 0 0 0 1 7 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) ALA171 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ARG172 11 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) SER173 0 0 0 4 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) THR174 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) TYR176 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) LYS177 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (118) LEU123 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (121) THR126 0 0 0 0 0 0 0 0 0 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 0 (122) ASN127 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 (125) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 3 14 7 3 0 0 0 0 0 0 0 0 0 (135) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 (137) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 0 0 0 0 0 0 0 (167) ARG172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 8 (168) SER173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 (169) THR174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (171) TYR176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 (172) LYS177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 prot.sequence mrifgyarvstsqqsldiqiralkdagvkanriftdkastdregldllrmkveegdvilvkkldrlgrdtadmiqlikefdaqgvavrfiddgistdgdmgqmvvtilsavaqaerrrilertnegkgikFgRrrtvdrnvvltlhqkgtgateiahqlsiARSTvYKilederasa/mrifgyarvstsqqsldiqiralkdagvkanriftdkadregldllrmkveegdvilvkkldrlgrdtadmiqlikefdaqgvavrfiddgistdgdmgqmvvtilsavaqaerrriLerTNegRqeaklkgikFgRrrtvdrnvvltlhqkgtgateiahqlsiaRSTvYKilederas >5cy2_EF:Resolvase-like;Homeodomain-like; title=TN3 RESOLVASE - SITE III COMPLEX CRYSTAL FORM II organism=Escherichia coli DNA sequence DT(G4):DA(H28) DG(G5):DC(H27) DT(G6):DA(H26) DC(G7):DG(H25) DT(G8):DA(H24) DG(G9):DC(H23) DA(G10):DT(H22) DT(G11):DA(H21) DA(G12):DT(H20) DT(G13):DA(H19) DT(G14):DA(H18) DC(G15):DG(H17) DG(G16):DC(H16) DA(G17):DT(H15) DT(G18):DA(H14) DT(G19):DA(H13) DT(G20):DA(H12) DA(G21):DT(H11) DA(G22):DT(H10) DG(G23):DC(H9) DG(G24):DC(H8) DT(G25):DA(H7) DA(G26):DT(H6) DC(G27):DG(H5) DA(G28):DT(H4) chainE (130) PHE140 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) ARG142 0 0 0 0 0 0 0 5 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) ARG172 10 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) SER173 0 0 0 4 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) THR174 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) TYR176 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) LYS177 0 0 0 0 3 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (118) LEU123 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (121) THR126 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 0 0 0 0 0 0 0 0 0 0 (122) ASN127 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (125) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 1 9 4 0 0 0 0 0 0 0 0 0 0 (135) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (137) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 5 0 0 0 0 0 0 0 (157) THR162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (166) ALA171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (167) ARG172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 14 (168) SER173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 0 0 0 (169) THR174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (171) TYR176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 2 (172) LYS177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 prot.sequence mrifgyarvstsqqsldiqiralkdagvkanriftdkastdregldllrmkveegdvilvkkldrlgrdtadmiqlikefdaqgvavrfiddgistdgdmgqmvvtilsavaqaerrrilertnekgikFgRrrtvdrnvvltlhqkgtgateiahqlsiaRSTvYKilederasa/mrifgyarvstsqqsldiqiralkdagvkanriftdkadregldllrmkveegdvilvkkldrlgrdtadmiqlikefdaqgvavrfiddgistdgdmgqmvvtilsavaqaerrriLerTNegRqeaklkgikFgRrrtvdrnvvltlhqkgtgaTeiahqlsiARSTvYKilederas >5cys_A:Uracil-DNA_glycosylase-like; title=STRUCTURE OF THE ENZYME-PRODUCT COMPLEX RESULTING FROM TDG ACTION ON A GCAC MISMATCH organism=Homo sapiens DNA sequence DC(C1):DG(D28) DA(C2):DT(D27) DG(C3):DC(D26) DC(C4):DG(D25) DT(C5):DA(D24) DC(C6):DG(D23) DT(C7):DA(D22) DG(C8):DC(D21) DT(C9):DA(D20) DA(C10):DT(D19) DC(C11):DG(D18) DG(C12):ORP(D17) DT(C13):DA(D16) DG(C14):DC(D15) DA(C15):DT(D14) DG(C16):DC(D13) DC(C17):DG(D12) DG(C18):DC(D11) DA(C19):DT(D10) DT(C20):DA(D9) DG(C21):DC(D8) DG(C22):DC(D7) DA(C23):DT(D6) DC(C24):DG(D5) DA(C25):DT(D4) DG(C26):DC(D3) DC(C27):DG(D2) DT(C28):DA(D1) chainA ( 31) ILE139 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN140 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ASN157 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) THR197 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) SER200 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) SER273 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ALA274 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ARG275 0 0 0 0 0 0 0 0 0 0 10 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) CYS276 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ALA277 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) GLN278 0 0 0 0 0 0 0 0 1 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) PRO280 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence asfngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnHfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSkdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARCAQfPraqdkvhyyiklkdlrdqlkgiern >5czz_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS CAS9 IN COMPLEX WITH SGRNA AND TARGET DNA (TTGAAT PAM) organism=Staphylococcus aureus subsp. aureus DNA sequence DC(C1):DG(D8) DT(C2):DA(D7) DA(C3):DT(D6) DT(C4):DA(D5) DT(C5):DA(D4) DC(C6):DG(D3) DA(C7):DT(D2) DA(C8):DT(D1) chainA (976) ASN985 0 0 0 0 9 2 0 0 (977) ASN986 0 0 0 2 0 0 0 0 (980) LEU989 0 0 1 0 0 0 0 0 (982) ARG991 2 4 8 4 0 0 0 0 (993) ARG1002 0 0 0 0 0 0 1 0 (1004) PRO1013 0 0 0 2 0 0 0 0 (1006) ARG1015 0 0 0 0 4 11 23 0 prot.sequence rnyilgldigitsvgygiidyetrdvidagvrlfkeanvennegrrskrgarrlkrrrrhriqrvkkllfdynlltdhselsginpyearvkglsqklseeefsaallhlakrrgvhnvneveedtgnelstkeqisrnskaleekyvaelqlerlkkdgevrgsinrfktsdyvkeakqllkvqkayhqldqsfidtyidlletrrtyyegpgegspfgwkdikewyemlmghctyfpeelrsvkyaynadlynalndlnnlvitrdenekleyyekfqiienvfkqkkkptlkqiakeilvneedikgyrvtstgkpeftnlkvyhdikditarkeiienaelldqiakiltiyqssediqeeltnlnseltqeeieqisnlkgytgthnlslkainlildelwhtndnqiaifnrlklvpkkvdlsqqkeipttlvddfilspvvkrsfiqsikvinaiikkyglpndiiielareknskdaqkminemqkrnrqtnerieeiirttgkenakyliekiklhdmqegkclysleaipledllnnpfnyevdhiiprsvsfdnsfnnkvlvkqeeaskkgnrtpfqylsssdskisyetfkkhilnlakgkgrisktkkeylleerdinrfsvqkdfinrnlvdtryatrglmnllrsyfrvnnldvkvksinggftsflrrkwkfkkernkgykhhaedaliianadfifkewkkldkakkvmenqmfmpeieteqeykeifitphqikhikdfkdykyshrvdkkpnrelindtlystrkddkgntlivnnlnglydkdndklkklinkspekllmyhhdpqtyqklklimeqygdeknplykyyeetgnyltkyskkdngpvikkikyygNklnahlditddypnsrnkvvklslkpyrfdvyldngvykfvtvknldvikkenyyevnskayeeakklkkisnqaefiasfynndlikingelyrvigvNNdlLnRievnmidityReylenmndkrPpRiiktiasktqsikkystdilgnlyevkskkhpqiikk >5d23_A: title=THE CRYSTAL STRUCTURE OF STPR FROM BOMBYX MORI IN COMPLEX WITH 13-BP DNA DERIVED FROM THE +290 SITE OF FIBROIN GENE organism=Bombyx mori DNA sequence DG(B-17):DC(B17) DA(B-16):DT(B16) DA(B-15):DT(B15) DT(B-14):DA(B14) DC(B-13):DG(B13) DT(B-12):DA(B12) DA(B-11):DT(B11) DT(B-10):DA(B10) DG(B-9):DC(B9) DT(B-8):DA(B8) DA(B-7):DT(B7) DA(B-6):DT(B6) DA(B-5):DT(B5) chainA ( 8) MET134 0 0 0 0 0 0 0 0 0 10 6 8 0 ( 9) SER135 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 11) TYR137 0 0 0 0 0 0 0 0 0 0 1 13 0 ( 12) ALA138 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 15) ARG141 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 16) LEU142 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 27) ARG153 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 31) MET157 0 0 0 0 0 3 6 4 0 0 0 0 0 ( 32) SER158 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 34) TYR160 0 0 0 0 0 0 2 7 0 0 0 0 0 ( 35) ALA161 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 39) LEU165 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 50) ARG176 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 54) MET180 0 5 8 2 0 0 0 0 0 0 0 0 0 ( 57) TYR183 0 0 1 7 0 0 0 0 0 0 0 0 0 ( 61) ARG187 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence ratRlkrMSeYAakRLssetreqraiRlarMSaYAarrLanetpaqrqaRllrMsaYaakRqas >5d2q_A: title=CRYSTAL STRUCTURE OF STPR FROM BOMBYX MORI IN COMPLEX WITH 20-BP DNA DERIVED FROM +290 SITE OF THE FIBROIN GENE organism=Bombyx mori DNA sequence DG(B-20):DC(B20) DA(B-19):DT(B19) DT(B-18):DA(B18) DG(B-17):DC(B17) DA(B-16):DT(B16) DA(B-15):DT(B15) DT(B-14):DA(B14) DC(B-13):DG(B13) DT(B-12):DA(B12) DA(B-11):DT(B11) DT(B-10):DA(B10) DG(B-9):DC(B9) DT(B-8):DA(B8) DA(B-7):DT(B7) DA(B-6):DT(B6) DA(B-5):DT(B5) DT(B-4):DA(B4) DA(B-3):DT(B3) DC(B-2):DG(B2) DT(B-1):DA(B1) chainA ( 3) ALA115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 5) GLN117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 22) MET134 0 0 0 0 0 0 0 0 0 0 0 0 5 7 5 0 0 0 0 0 ( 23) SER135 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 25) TYR137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 ( 26) ALA138 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 29) ARG141 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 41) ARG153 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 45) MET157 0 0 0 0 0 0 0 0 9 9 3 0 0 0 0 0 0 0 0 0 ( 48) TYR160 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 49) ALA161 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG164 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 53) LEU165 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG176 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG179 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 ( 68) MET180 0 0 0 0 0 2 9 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) TYR183 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG187 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ayAaQrlanespeqratrlkrMSeYAakRlssetreqraiRlarMsaYAarRLanetpaqrqaRllRMsaYaakRqa >5d2s_A: title=CRYSTAL STRUCTURE OF STPR FROM BOMBYX MORI IN COMPLEX WITH 18-BP DNA CONTAINING FOUR REPETITIVE UNITS OF ATAC organism=Bombyx mori DNA sequence DT(B-22):DA(B22) DG(B-21):DC(B21) DT(B-20):DA(B20) DA(B-19):DT(B19) DT(B-18):DA(B18) DG(B-17):DC(B17) DT(B-16):DA(B16) DA(B-15):DT(B15) DT(B-14):DA(B14) DG(B-13):DC(B13) DT(B-12):DA(B12) DA(B-11):DT(B11) DT(B-10):DA(B10) DG(B-9):DC(B9) DT(B-8):DA(B8) DA(B-7):DT(B7) DT(B-6):DA(B6) DG(B-5):DC(B5) chainA ( 9) ARG107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 13) MET111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 3 0 ( 14) SER112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 16) TYR114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 17) ALA115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 20) ARG118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 ( 21) LEU119 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 32) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 36) MET134 0 0 0 0 0 0 0 0 0 0 8 8 3 0 0 0 0 0 ( 37) SER135 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 39) TYR137 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 ( 40) ALA138 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 44) LEU142 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 55) ARG153 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 59) MET157 0 0 0 0 0 0 9 8 3 0 0 0 0 0 0 0 0 0 ( 60) SER158 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 62) TYR160 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 63) ALA161 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG164 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 ( 67) LEU165 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG176 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) MET180 0 0 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) TYR183 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ALA184 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG187 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) GLN188 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence etseeraaRlakMSaYAaqRLanespeqratRlkrMSeYAakrLssetreqraiRlarMSaYAarRLanetpaqrqaRllrMsaYAakRQa >5d39_AC:p53-like_transcription_factors;SH2_domain;STAT; title=TRANSCRIPTION FACTOR-DNA COMPLEX organism=Homo sapiens DNA sequence DA(M1):DA(M21) DC(N2):DG(M20) DT(N3):DA(M19) DG(N4):DC(M18) DT(N5):DA(M17) DC(N6):DG(M16) DT(N7):DA(M15) DT(N8):DA(M14) DC(N9):DG(M13) DC(N10):DG(M12) DA(N11):DT(M11) DG(N12):DC(M10) DG(N13):DC(M9) DA(N14):DT(M8) DA(N15):DT(M7) DA(N16):DT(M6) DT(N17):DA(M5) DC(N18):DG(M4) DC(N19):DG(M3) chainA (134) LYS284 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (252) VAL414 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (253) HIS415 0 0 0 0 0 0 1 9 9 13 0 0 0 0 0 0 0 0 0 (255) ASN417 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (256) GLN418 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 chainC (135) LYS284 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (249) VAL414 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (250) HIS415 0 0 0 0 0 0 0 0 0 0 0 12 8 11 1 0 0 0 0 (252) ASN417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (253) GLN418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence qeelkfktglrrlqhrvgeihllrealalamllqettgeleaakalvlkriqiwkrqqqlagngapfeeslaplqerceslvdiysqlqqevgaaggelepktrasltgrldevlrtlvtscflvekqppqvlKtqtkfqagvrfllglrflpakpplvradmvtekqarelestgeiinntvplensipgnccsalfknlllkkikrcerkgtesvteekcavlfsasftlgpgklpiqlqalslplvviVHgNQdnnakatilwdnafsemdrvpfvvaervpwekmcetlnlkfmaevgtnrgllpehflflaqkifndnslsmeafqhrsvswsqfnkeillgrgftfwqwfdgvldltkrclrsywsdrliigfiskqyvtslllnepdgtfllrfsdseiggitiahvirgqdgspqieniqpfsakdlsirslgdrirdlaqlknlypkkpkdeafrshykpeqmgkdgrgvpatikmtve/qeelkfktglrrlqhrvgeihllrealealamllqettgeleaakalvlkriqiwkrqqqlagngapfeeslaplqerceslvdiysqlqqevgaaggelepktrasltgrldevlrtlvtscflvekqppqvlKtqtkfqagvrfllglrfpakpplvradmvtekqarelestgeiinntvplensipgnccsalfknlllkkikrcetesvteekcavlfsasftlgpgklpiqlqalslplvviVHgNQdnnakatilwdnafsemdrvpfvvaervpwekmcetlnlkfmaevgtnrgllpehflflaqkifndnslsmeafqhrsvswsqfnkeillgrgftfwqwfdgvldltkrclrsywsdrliigfiskqyvtslllnepdgtfllrfsdseiggitiahvirggspqieniqpfsakdlsirslgdrirdlaqlknlypkkpkdeafrshykpeqmgkdgrgvpatikmtve >5d39_B:p53-like_transcription_factors;SH2_domain;STAT; title=TRANSCRIPTION FACTOR-DNA COMPLEX organism=Homo sapiens DNA sequence DC(F2):DG(E20) DT(F3):DA(E19) DG(F4):DC(E18) DT(F5):DA(E17) DC(F6):DG(E16) DT(F7):DA(E15) DT(F8):DA(E14) DC(F9):DG(E13) DC(F10):DG(E12) DA(F11):DT(E11) DG(F12):DC(E10) DG(F13):DC(E9) DA(F14):DT(E8) DA(F15):DT(E7) DA(F16):DT(E6) DT(F17):DA(E5) DC(F18):DG(E4) DC(F19):DG(E3) chainB (132) LYS284 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (247) VAL414 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (248) HIS415 0 0 0 0 0 1 10 10 14 0 0 0 0 0 0 0 0 0 (250) ASN417 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (251) GLN418 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qeelkfktglrrlqhrvgeihllrealamllqettgeleaakalvlkriqiwkrqqqlagngapfeeslaplqerceslvdiysqlqqevgaaggelepktrasltgrldevlrtlvtscflvekqppqvlKtqtkfqagvrfllglrfpakpplvradmvtekqarelestgeiinntvplensipgnccsalfknlllkkikrcegtesvteekcavlfsasftlgpgklpiqlqalslplvviVHgNQdnnakatilwdnafsemdrvpfvvaervpwekmcetlnlkfmaevgtnrgllpehflflaqkifndnslsmeafqhrsvswsqfnkeillgrgftfwqwfdgvldltkrclrsywsdrliigfiskqyvtslllnepdgtfllrfsdseiggitiahvirgqdgspqieniqpfsakdlsirslgdrirdlaqlknlypkkpkdeafrshykpeqmgkdgrgvpatikmtve >5d39_BD:p53-like_transcription_factors;SH2_domain;STAT; title=TRANSCRIPTION FACTOR-DNA COMPLEX organism=Homo sapiens DNA sequence DC(F2):DG(E20) DT(F3):DA(E19) DG(F4):DC(E18) DT(F5):DA(E17) DC(F6):DG(E16) DT(F7):DA(E15) DT(F8):DA(E14) DC(F9):DG(E13) DC(F10):DG(E12) DA(F11):DT(E11) DG(F12):DC(E10) DG(F13):DC(E9) DA(F14):DT(E8) DA(F15):DT(E7) DA(F16):DT(E6) DT(F17):DA(E5) DC(F18):DG(E4) DC(F19):DG(E3) chainB (132) LYS284 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (247) VAL414 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (248) HIS415 0 0 0 0 0 1 10 10 14 0 0 0 0 0 0 0 0 0 (250) ASN417 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (251) GLN418 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 chainD (136) LYS284 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (250) VAL414 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (251) HIS415 0 0 0 0 0 0 0 0 0 0 13 7 8 1 0 0 0 0 (253) ASN417 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 (254) GLN418 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 prot.sequence qeelkfktglrrlqhrvgeihllrealamllqettgeleaakalvlkriqiwkrqqqlagngapfeeslaplqerceslvdiysqlqqevgaaggelepktrasltgrldevlrtlvtscflvekqppqvlKtqtkfqagvrfllglrfpakpplvradmvtekqarelestgeiinntvplensipgnccsalfknlllkkikrcegtesvteekcavlfsasftlgpgklpiqlqalslplvviVHgNQdnnakatilwdnafsemdrvpfvvaervpwekmcetlnlkfmaevgtnrgllpehflflaqkifndnslsmeafqhrsvswsqfnkeillgrgftfwqwfdgvldltkrclrsywsdrliigfiskqyvtslllnepdgtfllrfsdseiggitiahvirgqdgspqieniqpfsakdlsirslgdrirdlaqlknlypkkpkdeafrshykpeqmgkdgrgvpatikmtve/qeelkfktglrrlqhrvgeihllrealqealamllqettgeleaakalvlkriqiwkrqqqlagngapfeeslaplqerceslvdiysqlqqevgaaggelepktrasltgrldevlrtlvtscflvekqppqvlKtqtkfqagvrfllglrfpakpplvradmvtekqarelestgeiinntvplensipgnccsalfknlllkkikrcetesvteekcavlfsasftlgpgklpiqlqalslplvviVHgNQdnnakatilwdnafsemdrvpfvvaervpwekmcetlnlkfmaevgtnrgllpehflflaqkifndnslsmeafqhrsvswsqfnkeillgrgftfwqwfdgvldltkrclrsywsdrliigfiskqyvtslllnepdgtfllrfsdseiggitiahvirgqdgspqieniqpfsakdlsirslgdrirdlaqlknlypkkpkdeafrshykpeqmgkdgrgvpatikmtve >5d3g_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE BOUND TO A NOVEL 38-MER HAIRPIN TEMPLATE-PRIMER DNA APTAMER organism=? DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 89) GLU89 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwgltpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrQlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5d3g_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE BOUND TO A NOVEL 38-MER HAIRPIN TEMPLATE-PRIMER DNA APTAMER organism=? DNA sequence DC(F1):DG(F33) OMC(F2):DG(F32) DC(F3):DG(F31) OMC(F4):DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) chainC ( 89) GLU89 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwgpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskLlrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwy >5d4b_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURAL BASIS FOR A NEW TEMPLATED ACTIVITY BY TERMINAL DEOXYNUCLEOTIDYL TRANSFERASE: IMPLICATIONS FOR V(D)J RECOMBINATION organism=? DNA sequence DT(F1):DA(E5) DT(F2):DA(E4) DT(F3):DA(E3) DT(F4):DA(E2) DT(F5):DA(E1) chainA ( 39) SER187 5 0 0 0 0 ( 42) ALA190 3 0 0 0 0 prot.sequence kisqyacqrrttlnnynqlftdaldilaendelrenegSclAfmrassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilestfekqpsraldhfqkcflilkldhgrvhegkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >5d4b_AB: title=STRUCTURAL BASIS FOR A NEW TEMPLATED ACTIVITY BY TERMINAL DEOXYNUCLEOTIDYL TRANSFERASE: IMPLICATIONS FOR V(D)J RECOMBINATION organism=MUS MUSCULUS DNA sequence DT(F1):DA(E5) DT(F2):DA(E4) DT(F3):DA(E3) DT(F4):DA(E2) DT(F5):DA(E1) chainA ( 39) SER187 5 0 0 0 0 ( 42) ALA190 3 0 0 0 0 chainB ( 41) LEU189 0 0 0 0 1 ( 42) ALA190 0 0 0 0 4 ( 45) ARG193 0 0 0 0 3 prot.sequence kisqyacqrrttlnnynqlftdaldilaendelrenegSclAfmrassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilestfekqpsraldhfqkcflilkldhgrvhegkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna/kisqyacqrrttlnnynqlftdaldilaendelrenegscLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilestfekfkqaldhfqkcflilkldhgrvhegkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >5d4c_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS PRODUCT COMPLEX FOR TRANSCRIPTION INITIATION WITH ATP AND CTP organism=? DNA sequence DT(H6):DA(G18) DG(H7):DG(G17) DG(H8):DA(G16) DG(H9):DT(G15) DA(H10):DG(G14) DG(H11):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) chainC (237) ARG243 0 0 0 12 9 0 0 0 0 0 0 0 0 0 0 (240) ASP246 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (241) PRO247 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) TYR256 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (260) ARG266 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgDPpkrdkavaYvygliadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask >5d4c_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS PRODUCT COMPLEX FOR TRANSCRIPTION INITIATION WITH ATP AND CTP organism=? DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DG(H11) DG(G14):DA(H10) DT(G15):DG(H9) DA(G16):DG(H8) DG(G17):DG(H7) DA(G18):DT(H6) chainC (237) ARG243 0 0 0 0 0 0 0 0 0 0 9 12 0 0 0 (240) ASP246 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (241) PRO247 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 (250) TYR256 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (260) ARG266 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 chainD (703) ALA705 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 (704) PRO706 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainF ( 2) ASP79 0 0 0 0 0 0 0 0 0 0 0 1 11 0 0 ( 4) VAL81 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 ( 5) ARG82 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 ( 8) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 ( 9) HIS86 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 16) LEU93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 22) GLU99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (114) ASN191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (116) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 12 3 (117) LEU194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (159) SER236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (244) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (247) GLU324 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (249) ASP326 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 (250) SER327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (255) PHE332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgDPpkrdkavaYvygliadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpVRqyLHeigqvpLltleeEvelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieaNlRLvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfStyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdEkDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >5d4c_MNP: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS PRODUCT COMPLEX FOR TRANSCRIPTION INITIATION WITH ATP AND CTP organism=? DNA sequence DA(S4):DA(R18) DA(S5):DG(R17) DT(S6):DA(R16) DG(S7):DT(R15) DG(S8):DG(R14) DG(S9):DA(R13) DC(S16):DG(R12) DA(S17):DT(R11) DC(S18):DG(R10) DG(S19):DC(R9) DG(S20):DC(R8) DA(S21):DT(R7) DT(S22):DA(R6) DG(S23):DC(R5) DC(S24):DG(R4) chainM (205) ARG243 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 (208) ASP246 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (384) ARG422 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 chainN (703) ALA705 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainP ( 2) ASP79 0 0 0 0 13 1 0 0 0 0 0 0 0 0 0 ( 4) VAL81 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 ( 5) ARG82 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 ( 8) LEU85 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 ( 9) HIS86 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 11) ILE88 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU93 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU99 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (114) ASN191 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG193 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 (117) LEU194 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (159) SER236 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 (160) THR237 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) THR240 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ARG244 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ASP326 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) SER327 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) PHE332 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeeppfpqdecrekdltyqapllghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgDppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpVRqyLHeIgqvpLltleeEvelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieaNlRLvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfSTyaTwwiRqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >5d4d_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS PRODUCT COMPLEX FOR TRANSCRIPTION INITIATION WITH NAD AND CTP organism=? DNA sequence DT(G4):DA(H25) DG(G5):DC(H24) DC(G6):DG(H23) DA(G7):DT(H22) DT(G8):DA(H21) DC(G9):DG(H20) DC(G10):DG(H19) DG(G11):DC(H18) DT(G12):DA(H17) DG(G13):DC(H16) chainC (412) ARG422 0 0 0 0 0 0 0 0 0 18 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdRvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqlttqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >5d4d_MNP: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS PRODUCT COMPLEX FOR TRANSCRIPTION INITIATION WITH NAD AND CTP organism=? DNA sequence DT(S6):DA(R19) DG(S7):DG(R18) DG(S8):DA(R17) DG(S9):DT(R16) DA(S10):DG(R15) DG(S11):DA(R14) DC(S16):DG(R13) DA(S17):DT(R12) DC(S18):DG(R11) DG(S19):DC(R10) DG(S20):DC(R9) DA(S21):DT(R8) DT(S22):DA(R7) DG(S23):DC(R6) DC(S24):DG(R5) DA(S25):DT(R4) chainM (167) ASN187 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (223) ARG243 0 0 2 15 9 0 0 0 0 0 0 0 0 0 0 0 (226) ASP246 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (232) LYS252 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (236) TYR256 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 (246) ARG266 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (394) GLU421 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (395) ARG422 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 chainN (703) ALA705 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainP ( 2) ASP79 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) VAL81 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG82 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) LEU85 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU93 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU99 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ASN191 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG193 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) LEU194 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) LYS234 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) SER236 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ILE321 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ASP323 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) GLU324 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ASP326 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) SER327 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) PHE332 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieglvldfleyrlgeppfpqdecrekdltyqaplyardevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgDppkrdKavaYvygliadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqlttqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieeark/sDpVRqyLheigqvpLltleeEvelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieaNlRLvvsiakkytgrglsfldliqegnqgliravekfeykrrfKfStyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgDEkDSfygdFipdehlpspvdaatqsllseelekreamvlklerirqienkalrklkyhesrtrklrdfld >5d4e_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS PRODUCT COMPLEX FOR TRANSCRIPTION INITIATION WITH 3'-DEPHOSPHATE-COA AND CTP organism=? DNA sequence DT(H6):DA(G19) DG(H7):DG(G18) DG(H8):DA(G17) DG(H9):DT(G16) DA(H10):DG(G15) DG(H11):DA(G14) DC(H16):DG(G13) DA(H17):DT(G12) DC(H18):DG(G11) DG(H19):DC(G10) DG(H20):DC(G9) DA(H21):DT(G8) DT(H22):DA(G7) DG(H23):DC(G6) DC(H24):DG(G5) DA(H25):DT(G4) chainC (181) ASN187 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (237) ARG243 0 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 (240) ASP246 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (241) PRO247 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ARG266 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (415) GLU421 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 chainD (703) ALA705 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainF ( 2) ASP79 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) VAL81 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG82 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) LEU85 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) HIS86 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ILE88 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU93 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU99 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ASN191 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG193 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) LEU194 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) SER236 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ILE321 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ASP326 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) SER327 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) PHE332 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgDPpkrdkavayvygliadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpVRqyLHeIgqvpLltleeEvelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieaNlRLvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfStyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdekDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >5d4e_M:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS PRODUCT COMPLEX FOR TRANSCRIPTION INITIATION WITH 3'-DEPHOSPHATE-COA AND CTP organism=? DNA sequence DT(S6):DA(R19) DG(S7):DG(R18) DG(S8):DA(R17) DG(S9):DT(R16) DA(S10):DG(R15) DG(S11):DA(R14) DC(S16):DG(R13) DA(S17):DT(R12) DC(S18):DG(R11) DG(S19):DC(R10) DG(S20):DC(R9) DA(S21):DT(R8) DT(S22):DA(R7) DG(S23):DC(R6) DC(S24):DG(R5) DA(S25):DT(R4) chainM (237) ARG243 0 0 2 11 4 0 0 0 0 0 0 0 0 0 0 0 (241) PRO247 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) TYR256 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (260) ARG266 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 (415) GLU421 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdPpkrdkavaYvygliadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask >5d4e_MNP: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS PRODUCT COMPLEX FOR TRANSCRIPTION INITIATION WITH 3'-DEPHOSPHATE-COA AND CTP organism=? DNA sequence DT(R4):DA(S25) DG(R5):DC(S24) DC(R6):DG(S23) DA(R7):DT(S22) DT(R8):DA(S21) DC(R9):DG(S20) DC(R10):DG(S19) DG(R11):DC(S18) DT(R12):DA(S17) DG(R13):DC(S16) DA(R14):DG(S11) DG(R15):DA(S10) DT(R16):DG(S9) DA(R17):DG(S8) DG(R18):DG(S7) DA(R19):DT(S6) chainM (237) ARG243 0 0 0 0 0 0 0 0 0 0 0 4 11 2 0 0 (241) PRO247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 (250) TYR256 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 (260) ARG266 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 (415) GLU421 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 chainN (703) ALA705 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 (704) PRO706 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chainP ( 2) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 ( 4) VAL81 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 ( 5) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 ( 8) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 ( 9) HIS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 16) LEU93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 22) GLU99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (114) ASN191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (116) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 (117) LEU194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (159) SER236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (244) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (246) ASP323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (247) GLU324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (249) ASP326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 (250) SER327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (255) PHE332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdPpkrdkavaYvygliadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpVRqyLHeigqvpLltleeEvelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieaNlRLvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfStyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgDEkDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >5d4r_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ARAR(DBD) IN COMPLEX WITH OPERATOR ORE1 organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DT(U23):DA(T21) DA(U24):DT(T20) DT(U25):DA(T19) DT(U26):DA(T18) DT(U27):DA(T17) DG(U28):DC(T16) DT(U29):DA(T15) DA(U30):DT(T14) DC(U31):DG(T13) DG(U32):DC(T12) DT(U33):DA(T11) DA(U34):DT(T10) DC(U35):DG(T9) DT(U36):DA(T8) DA(U37):DT(T7) DA(U38):DT(T6) DT(U39):DA(T5) DT(U40):DA(T4) DA(U41):DT(T3) DT(U42):DA(T2) chainA ( 44) GLU30 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) SER40 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 55) ARG41 0 0 0 0 13 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) HIS42 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 ( 59) ARG45 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN61 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 33) GLU30 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 43) SER40 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG41 0 0 0 0 0 0 0 0 0 0 0 2 14 6 0 0 0 0 0 0 ( 45) HIS42 0 0 0 0 0 0 0 0 18 16 5 0 0 0 0 0 0 0 0 0 ( 48) ARG45 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 ( 64) GLN61 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 prot.sequence hlevlfqgplgsefmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva/sefmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva >5d4r_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ARAR(DBD) IN COMPLEX WITH OPERATOR ORE1 organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DT(U23):DA(T21) DA(U24):DT(T20) DT(U25):DA(T19) DT(U26):DA(T18) DT(U27):DA(T17) DG(U28):DC(T16) DT(U29):DA(T15) DA(U30):DT(T14) DC(U31):DG(T13) DG(U32):DC(T12) DT(U33):DA(T11) DA(U34):DT(T10) DC(U35):DG(T9) DT(U36):DA(T8) DA(U37):DT(T7) DA(U38):DT(T6) DT(U39):DA(T5) DT(U40):DA(T4) DA(U41):DT(T3) DT(U42):DA(T2) chainB ( 33) GLU30 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 43) SER40 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG41 0 0 0 0 0 0 0 0 0 0 0 2 14 6 0 0 0 0 0 0 ( 45) HIS42 0 0 0 0 0 0 0 0 18 16 5 0 0 0 0 0 0 0 0 0 ( 48) ARG45 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 ( 64) GLN61 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 prot.sequence sefmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva >5d4s_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ARAR(DBD) IN COMPLEX WITH OPERATOR ORX1 organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DA(T2):DT(U21) DA(T3):DT(U20) DT(T4):DA(U19) DA(T5):DT(U18) DT(T6):DA(U17) DT(T7):DA(U16) DT(T8):DA(U15) DG(T9):DC(U14) DT(T10):DA(U13) DA(T11):DT(U12) DC(T12):DG(U11) DG(T13):DC(U10) DT(T14):DA(U9) DA(T15):DT(U8) DT(T16):DA(U7) DG(T17):DC(U6) DT(T18):DA(U5) DA(T19):DT(U4) DT(T20):DA(U3) DT(T21):DA(U2) chainA ( 32) GLU30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 42) SER40 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 44) HIS42 0 0 0 0 0 0 0 0 0 0 21 13 4 0 0 0 0 0 0 0 ( 47) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 ( 63) GLN61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 prot.sequence efmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSrHtiRkaigdlvsqgllysvQgggtfva >5d4s_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ARAR(DBD) IN COMPLEX WITH OPERATOR ORX1 organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DA(T2):DT(U21) DA(T3):DT(U20) DT(T4):DA(U19) DA(T5):DT(U18) DT(T6):DA(U17) DT(T7):DA(U16) DT(T8):DA(U15) DG(T9):DC(U14) DT(T10):DA(U13) DA(T11):DT(U12) DC(T12):DG(U11) DG(T13):DC(U10) DT(T14):DA(U9) DA(T15):DT(U8) DT(T16):DA(U7) DG(T17):DC(U6) DT(T18):DA(U5) DA(T19):DT(U4) DT(T20):DA(U3) DT(T21):DA(U2) chainA ( 32) GLU30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 42) SER40 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 44) HIS42 0 0 0 0 0 0 0 0 0 0 21 13 4 0 0 0 0 0 0 0 ( 47) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 ( 63) GLN61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 chainB ( 45) GLU30 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASN31 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) SER40 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 56) ARG41 0 0 0 0 0 0 17 13 2 0 0 0 0 0 0 0 0 0 0 0 ( 57) HIS42 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 ( 60) ARG45 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 ( 76) GLN61 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSrHtiRkaigdlvsqgllysvQgggtfva/hhhlevlfqgplsefmlpkyaqvkeeisswinqgkilpdqkiptENelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva >5d5u_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN HSF1 WITH HSE DNA organism=Homo sapiens DNA sequence DG(A1) DG(A2) DT(A3) DT(A4) DC(A5) DT(A6) DA(A7) DG(A8) DA(A9) DA(A10) DC(A11) DC(A12) chainB ( 56) SER68 0 0 0 4 0 0 0 0 0 0 0 0 ( 59) ARG71 0 0 0 6 2 0 0 0 0 0 0 0 ( 60) GLN72 0 0 2 0 0 0 0 0 0 0 0 0 ( 63) MET75 0 0 1 0 0 0 0 0 0 0 0 0 ( 98) ARG117 1 6 0 0 0 0 0 0 0 0 0 0 prot.sequence snvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlnMygfrkvvhieerddtefqhpcflrgqeqllenikRkv >5d5v_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN HSF1 WITH SATELLITE III REPEAT DNA organism=Homo sapiens DNA sequence DC(C1):DG(A12) DA(C2):DT(A11) DT(C3):DA(A10) DT(C4):DA(A9) DC(C5):DG(A8) DC(C6):DG(A7) DA(C7):DT(A6) DT(C8):DA(A5) DT(C9):DA(A4) DC(C10):DG(A3) DC(C11):DG(A2) DG(C12):DC(A1) chainB ( 55) SER68 0 0 0 4 0 0 0 0 0 0 0 0 ( 57) VAL70 0 0 0 0 0 0 1 0 0 0 0 0 ( 58) ARG71 0 0 0 8 15 23 0 0 0 0 0 0 ( 59) GLN72 0 0 4 0 0 0 0 0 0 0 0 0 ( 61) ASN74 0 0 0 0 0 0 5 0 0 0 0 0 ( 62) MET75 0 0 2 1 0 0 0 0 0 0 0 0 ( 93) ARG117 4 2 0 0 0 0 0 0 0 0 0 0 prot.sequence nvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNMygfrkvvhddtefqhpcflrgqeqllenikRkvt >5d5v_BD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN HSF1 WITH SATELLITE III REPEAT DNA organism=Homo sapiens DNA sequence DC(A1):DG(C12) DG(A2):DC(C11) DG(A3):DC(C10) DA(A4):DT(C9) DA(A5):DT(C8) DT(A6):DA(C7) DG(A7):DC(C6) DG(A8):DC(C5) DA(A9):DT(C4) DA(A10):DT(C3) DT(A11):DA(C2) DG(A12):DC(C1) chainB ( 55) SER68 0 0 0 0 0 0 0 0 4 0 0 0 ( 57) VAL70 0 0 0 0 0 1 0 0 0 0 0 0 ( 58) ARG71 0 0 0 0 0 0 23 15 8 0 0 0 ( 59) GLN72 0 0 0 0 0 0 0 0 0 4 0 0 ( 61) ASN74 0 0 0 0 0 5 0 0 0 0 0 0 ( 62) MET75 0 0 0 0 0 0 0 0 1 2 0 0 ( 93) ARG117 0 0 0 0 0 0 0 0 0 0 2 4 chainD ( 56) SER68 0 0 0 4 0 0 0 0 0 0 0 0 ( 59) ARG71 0 18 13 9 0 0 0 0 0 0 0 0 ( 60) GLN72 0 0 0 0 2 0 0 0 0 0 0 0 (104) ARG117 0 0 0 0 1 5 0 0 0 0 0 0 prot.sequence nvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNMygfrkvvhddtefqhpcflrgqeqllenikRkvt/snvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNmygfrkvvhieqggvkperddtefqhpcflrgqeqllenikRkvt >5d5w_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF CHAETOMIUM THERMOPHILUM SKN7 WITH HSE DNA organism=Chaetomium thermophilum DNA sequence DG(A1) DG(A2) DT(A3) DT(A4) DC(A5) DT(A6) DA(A7) DG(A8) DA(A9) DA(A10) DC(A11) DC(A12) chainB ( 53) SER93 0 0 0 4 0 0 0 0 0 0 0 0 ( 56) ARG96 0 0 0 5 1 0 0 0 0 0 0 0 ( 57) GLN97 0 0 3 0 0 0 0 0 0 0 0 0 ( 60) LYS100 0 3 6 0 0 0 0 0 0 0 0 0 prot.sequence sdfvrklykmledpsyhsvvrwsddgdsfvvlenekftktilpkhfKhsnfaSfvRQlnKydfhkvrpygrdawefkhpefradrkdnldnirr >5d5x_BE:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF CHAETOMIUM THERMOPHILUM SKN7 WITH SSRE DNA organism=Chaetomium thermophilum DNA sequence DG(A1):DC(D13) DG(A2):DC(D12) DC(A3):DG(D11) DC(A4):DG(D10) DC(A5):DG(D9) DA(A6):DT(D8) DG(A7):DC(D7) DC(A8):DG(D6) DC(A9):DG(D5) DA(A10):DT(D4) DA(A11):DT(D3) DA(A12):DT(D2) DT(A13):DA(D1) chainB ( 53) SER93 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 55) VAL95 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 56) ARG96 0 0 9 17 27 0 0 0 0 0 0 0 0 ( 59) ASN99 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 60) LYS100 0 1 8 0 0 0 0 0 0 0 0 0 0 ( 98) ARG142 4 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 53) SER93 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 56) ARG96 0 0 0 0 0 25 16 8 0 0 0 0 0 ( 59) ASN99 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 60) LYS100 0 0 0 0 0 0 0 7 5 0 0 0 0 ( 97) ARG142 0 0 0 0 0 0 0 0 0 7 0 0 0 prot.sequence sdfvrklykmledpsyhsvvrwsddgdsfvvlenekftktilpkhfkhsnfaSfVRqlNKydfhkvrhndepygrdawefkhpefradrkdnldnirRk/sdfvrklykmledpsyhsvvrwsddgdsfvvlenekftktilpkhfkhsnfaSfvRqlNKydfhkvrhnspygrdawefkhpefradrkdnldnirRk >5d5x_E:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF CHAETOMIUM THERMOPHILUM SKN7 WITH SSRE DNA organism=Chaetomium thermophilum DNA sequence DG(A1):DC(D13) DG(A2):DC(D12) DC(A3):DG(D11) DC(A4):DG(D10) DC(A5):DG(D9) DA(A6):DT(D8) DG(A7):DC(D7) DC(A8):DG(D6) DC(A9):DG(D5) DA(A10):DT(D4) DA(A11):DT(D3) DA(A12):DT(D2) DT(A13):DA(D1) chainE ( 53) SER93 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 56) ARG96 0 0 0 0 0 25 16 8 0 0 0 0 0 ( 59) ASN99 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 60) LYS100 0 0 0 0 0 0 0 7 5 0 0 0 0 ( 97) ARG142 0 0 0 0 0 0 0 0 0 7 0 0 0 prot.sequence sdfvrklykmledpsyhsvvrwsddgdsfvvlenekftktilpkhfkhsnfaSfvRqlNKydfhkvrhnspygrdawefkhpefradrkdnldnirRk >5d8c_A:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HINMLR, A MERR FAMILY REGULATOR LACKING THE SENSOR DOMAIN, BOUND TO PROMOTER DNA organism=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) / Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) DNA sequence DC(C1):DG(D18) DT(C2):DA(D17) DT(C3):DA(D16) DA(C4):DT(D15) DG(C5):DC(D14) DA(C6):DT(D13) DG(C7):DC(D12) DT(C8):DA(D11) DT(C9):DA(D10) DC(C10):DG(D9) DA(C11):DT(D8) DC(C12):DG(D7) DT(C13):DA(D6) DC(C14):DG(D5) DT(C15):DA(D4) DA(C16):DT(D3) DA(C17):DT(D2) DG(C18):DC(D1) chainA ( 17) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 1 15 3 0 0 0 ( 20) ARG20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 ( 21) PHE21 0 0 0 0 0 0 0 0 0 0 1 12 4 0 0 0 0 0 ( 24) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 prot.sequence mtyttakaaekigisaYtlRFydKegllpnvgrdeygnrrftdkdlqwlsllqclkntgmslkdikrfaectiigddtieerlslfenqtknvkcqiaelkryldlleyklafyqkakalgsvkav >5d8c_AB:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HINMLR, A MERR FAMILY REGULATOR LACKING THE SENSOR DOMAIN, BOUND TO PROMOTER DNA organism=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) / Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) / Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) / Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) DNA sequence DC(C1):DG(D18) DT(C2):DA(D17) DT(C3):DA(D16) DA(C4):DT(D15) DG(C5):DC(D14) DA(C6):DT(D13) DG(C7):DC(D12) DT(C8):DA(D11) DT(C9):DA(D10) DC(C10):DG(D9) DA(C11):DT(D8) DC(C12):DG(D7) DT(C13):DA(D6) DC(C14):DG(D5) DT(C15):DA(D4) DA(C16):DT(D3) DA(C17):DT(D2) DG(C18):DC(D1) chainA ( 17) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 1 15 3 0 0 0 ( 20) ARG20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 ( 21) PHE21 0 0 0 0 0 0 0 0 0 0 1 12 4 0 0 0 0 0 ( 24) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 chainB ( 19) TYR17 0 0 0 3 13 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG20 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) PHE21 0 0 0 0 0 3 12 1 0 0 0 0 0 0 0 0 0 0 ( 26) LYS24 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mtyttakaaekigisaYtlRFydKegllpnvgrdeygnrrftdkdlqwlsllqclkntgmslkdikrfaectiigddtieerlslfenqtknvkcqiaelkryldlleyklafyqkakalgsvkav/namtyttakaaekigisaYtlRFydKegllpnvgrdeygNrrftdkdlqwlsllqclkntgmslkdikrfaectiigddtieerlslfenqtknvkcqiaelkryldlleyklafyqkakalgsvkav >5d8k_B:"Winged_helix"_DNA-binding_domain; title=HUMAN HSF2 DNA-BINDING DOMAIN BOUND TO 2-SITE HSE DNA AT 1.73 ANGSTROMS RESOLUTION organism=Homo sapiens DNA sequence DG(A1) DG(A2) DT(A3) DT(A4) DC(A5) DT(A6) DA(A7) DG(A8) DA(A9) DA(A10) DC(A11) DC(A12) chainB ( 55) SER60 0 0 0 4 0 0 0 0 0 0 0 0 ( 58) ARG63 0 0 0 7 3 0 0 0 0 0 0 0 ( 59) GLN64 0 0 3 0 0 0 0 0 0 0 0 0 ( 62) MET67 0 0 2 0 0 0 0 0 0 0 0 0 (104) ARG109 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence hmpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfKhnnmaSfvRQlnMygfrkvvhidsgivkqerdgpvefqhpyfkqgqddllenikRkv >5d8l_D:"Winged_helix"_DNA-binding_domain; title=HUMAN HSF2 DNA BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA AT 2.1 ANGSTROMS RESOLUTION organism=Homo sapiens DNA sequence DG(G1):DC(E17) DT(G2):DA(E16) DG(G3):DC(E15) DA(G4):DT(E14) DA(G5):DT(E13) DT(G6):DA(E12) DA(G7):DT(E11) DT(G8):DA(E10) DT(G9):DA(E9) DC(G10):DG(E8) DT(G11):DA(E7) DA(G12):DT(E6) DG(G13):DC(E5) DA(G14):DT(E4) DA(G15):DT(E3) DC(G16):DG(E2) DC(G17):DG(E1) DG(C1):DC(A17) DG(C2):DC(A16) DT(C3):DA(A15) DT(C4):DA(A14) DC(C5):DG(A13) DT(C6):DA(A12) DA(C7):DT(A11) DG(C8):DC(A10) DA(C9):DT(A9) DA(C10):DT(A8) DT(C11):DA(A7) DA(C12):DT(A6) DT(C13):DA(A5) DT(C14):DA(A4) DC(C15):DG(A3) DA(C16):DT(A2) DC(C17):DG(A1) chainD ( 55) SER60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) VAL62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 58) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 24 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ASN66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 62) MET67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) ARG109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfkhnnmaSfVRQlNMygfrkvvhidgpvefqhpyfkqgqddllenikRkv >5d8l_DF:"Winged_helix"_DNA-binding_domain; title=HUMAN HSF2 DNA BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA AT 2.1 ANGSTROMS RESOLUTION organism=Homo sapiens DNA sequence DG(G1):DC(E17) DT(G2):DA(E16) DG(G3):DC(E15) DA(G4):DT(E14) DA(G5):DT(E13) DT(G6):DA(E12) DA(G7):DT(E11) DT(G8):DA(E10) DT(G9):DA(E9) DC(G10):DG(E8) DT(G11):DA(E7) DA(G12):DT(E6) DG(G13):DC(E5) DA(G14):DT(E4) DA(G15):DT(E3) DC(G16):DG(E2) DC(G17):DG(E1) DG(C1):DC(A17) DG(C2):DC(A16) DT(C3):DA(A15) DT(C4):DA(A14) DC(C5):DG(A13) DT(C6):DA(A12) DA(C7):DT(A11) DG(C8):DC(A10) DA(C9):DT(A9) DA(C10):DT(A8) DT(C11):DA(A7) DA(C12):DT(A6) DT(C13):DA(A5) DT(C14):DA(A4) DC(C15):DG(A3) DA(C16):DT(A2) DC(C17):DG(A1) chainD ( 55) SER60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) VAL62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 58) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 24 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ASN66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 62) MET67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) ARG109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 55) SER60 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) VAL62 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG63 0 0 0 0 0 0 0 0 0 0 0 24 13 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ASN66 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) MET67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfkhnnmaSfVRQlNMygfrkvvhidgpvefqhpyfkqgqddllenikRkv/hmpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfKhnnmaSfVRQlNMygfrkvvhiddgpvefqhpyfkqgqddllenikRkv >5d9i_A:Origin_of_replication-binding_domain,_RBD-like; title=SV40 LARGE T ANTIGEN ORIGIN BINDING DOMAIN BOUND TO ARTIFICIAL DNA FORK organism=SIMIAN VIRUS 40 DNA sequence DC(Y5):DG(X18) DT(Y6):DA(X17) DC(Y7):DG(X16) DC(Y8):DG(X15) DG(Y9):DT(X14) DA(Y10):DT(X13) DA(Y11):DT(X12) DA(Y12):DT(X11) DA(Y13):DT(X10) DA(Y14):DT(X9) DA(Y15):DC(X8) DC(Y16):DG(X7) DC(Y17):DG(X6) DT(Y18):DA(X5) DC(Y19):DG(X4) DC(Y20):DG(X3) DG(Y21):DA(X2) chainA ( 25) ASN153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence gskvedpkdfpsellsflshavfsNrtlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphrhrvsainnyaqkltfsflickgvnkeylmysaltrdpfsvieeslpgglkehdfnpes >5d9i_AB:Origin_of_replication-binding_domain,_RBD-like; title=SV40 LARGE T ANTIGEN ORIGIN BINDING DOMAIN BOUND TO ARTIFICIAL DNA FORK organism=SIMIAN VIRUS 40 DNA sequence DA(X2):DG(Y21) DG(X3):DC(Y20) DG(X4):DC(Y19) DA(X5):DT(Y18) DG(X6):DC(Y17) DG(X7):DC(Y16) DC(X8):DA(Y15) DT(X9):DA(Y14) DT(X10):DA(Y13) DT(X11):DA(Y12) DT(X12):DA(Y11) DT(X13):DA(Y10) DT(X14):DG(Y9) DG(X15):DC(Y8) DG(X16):DC(Y7) DA(X17):DT(Y6) DG(X18):DC(Y5) chainA ( 25) ASN153 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence gskvedpkdfpsellsflshavfsNrtlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphrhrvsainnyaqkltfsflickgvnkeylmysaltrdpfsvieeslpgglkehdfnpes/gskvedpkdfpsellsflshavfsNrtlacfaiyttkekaallykkimekysvtfisrhnsynhnilffltphrhrvsainnyaqkltfsflickgvnkeylmysaltrdpfsvieeslpgglkehdfnpe >5d9y_A: title=CRYSTAL STRUCTURE OF TET2-5FC COMPLEX organism=HOMO SAPIENS DNA sequence DA(C1):DT(B12) DG(C2):DC(B11) DC(C3):DG(B10) DT(C4):DA(B9) DT(C5):DA(B8) DC(C6):DG(B7) DG(C7):DT(B5) DA(C8):DG(B4) DC(C9):DT(B3) DA(C10):DC(B2) DG(C11):DA(B1) chainA (160) TRP1291 0 0 0 0 0 0 0 1 0 0 0 (162) MET1293 0 0 0 0 0 0 10 13 0 0 0 (163) TYR1294 0 0 0 0 0 65 11 0 0 0 0 (164) TYR1295 0 0 0 0 0 6 0 0 0 0 0 (171) ARG1302 0 0 0 4 2 0 0 0 0 0 0 (255) HIS1386 0 0 0 0 0 0 2 0 0 0 0 prot.sequence scrcveqiiekdegpfythlgagpnvaaireimeerfgqkgkairierviytgkegkssqgcpiakwvvrrssseekllclvreraghtceaavivililvwegiplsladklyseltetlrkygtltnrrcalneertcacqgldpetcgasfsfgcsWsMYYngckfaRskiprkfkllgddpkeeekleshlqnlstlmaptykklapdaynnqieyehrapecrlglkegrpfsgvtacldfcahahrdlHnmqngstlvctltrednrefggkpedeqlhvlplykvsdvdefgsveaqeekkrsgaiqvlssfrrkvrmlaepvktcgsdevwsdseqsfldpdiggvavapthgsiliecakrelhattplknpnrnhptrislvfyqhksmnepkhglalweakm >5dac_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=ATP-GAMMA-S BOUND RAD50 FROM CHAETOMIUM THERMOPHILUM IN COMPLEX WITH DNA organism=? DNA sequence DG(D1):DC(C15) DG(D2):DC(C14) DG(D3):DC(C13) DG(D4):DC(C12) DG(D5):DC(C11) DG(D6):DC(C10) DG(D7):DC(C9) DG(D8):DC(C8) DG(D9):DC(C7) DG(D10):DC(C6) DG(D11):DC(C5) DG(D12):DC(C4) DG(D13):DC(C3) DG(D14):DC(C2) DG(D15):DC(C1) chainA ( 60) ARG61 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence skieklsilgvrsfgphhpetiafntpltlivgyngsgkttvieclkyattgelppnstRngafihdpdlvgekevraqvklsfrstigesyvvtrniqllvqrnnkrtqktlegslllrnngertvistrvaeldklvseklgvppaildavifchqddslwpmsepaalkkrfdeifeaqkytkvienirllkkkkgdelkilkerevqdkankeraedlkdakakykethikvettkaaiedlgrgmaavdhaimqyhskmmeqinrtiaelwqstyqgtdidtiqirsdvesttssdsgtrrnynyrvsmvkgdtemdmrgrcsagqkvlasiiirlalaesfcancglialdqpttnldsdnirslaeslhgiikarqaqgnlqlivithdeeflkymqcsdfcddfyrvkrdekqnsvivresitr >5db6_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA HOST-GUEST COMPLEX WITH THE N7MG BASE PAIRED WITH A DC organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 34 0 0 0 0 ( 29) LYS35 9 0 0 0 0 ( 32) ALA38 4 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5db7_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA HOST-GUEST COMPLEX WITH THE N7MG BASE PAIRED WITH A DT organism=HOMO SAPIENS DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 38 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 4 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5db8_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA HOST-GUEST COMPLEX WITH THE N7MG BASE PAIRED WITH A DA organism=HOMO SAPIENS DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 37 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 4 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5db9_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA HOST-GUEST COMPLEX WITH THE N7MG BASE PAIRED WITH A DG organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 39 0 0 0 0 ( 29) LYS35 9 0 0 0 0 ( 32) ALA38 4 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5dba_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA HOST-GUEST COMPLEX WITH THE DG BASE PAIRED WITH A DT organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 36 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 5 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5dbb_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA HOST-GUEST COMPLEX WITH THE DG BASE PAIRED WITH A DA organism=HOMO SAPIENS DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 40 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 4 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5dbc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA HOST-GUEST COMPLEX WITH THE DG BASE PAIRED WITH A DG organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 39 0 0 0 0 ( 29) LYS35 9 0 0 0 0 ( 32) ALA38 4 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5ddg_A:Nudix;"Winged_helix"_DNA-binding_domain; title=THE STRUCTURE OF TRANSCRIPTIONAL FACTOR ARAR FROM BACTEROIDES THETAIOTAOMICRON VPI IN COMPLEX WITH TARGET DOUBLE STRAND DNA organism=? DNA sequence DG(C1):DC(D27) DC(C2):DG(D26) DA(C3):DT(D25) DA(C4):DT(D24) DA(C5):DT(D23) DA(C6):DT(D22) DG(C7):DC(D21) DT(C8):DA(D20) DG(C9):DC(D19) DT(C10):DA(D18) DT(C11):DA(D17) DA(C12):DT(D16) DC(C13):DG(D15) DT(C14):DA(D14) DT(C15):DA(D13) DT(C16):DA(D12) DT(C17):DA(D11) DA(C18):DT(D10) DC(C19):DG(D9) DA(C20):DT(D8) DC(C21):DG(D7) DC(C22):DG(D6) DC(C23):DG(D5) DA(C24):DT(D4) DT(C25):DA(D3) DG(C26):DC(D2) DC(C27):DG(D1) chainA (179) ASP178 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) LYS179 0 0 0 0 0 5 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG180 0 0 0 0 0 0 0 42 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) ASN181 0 0 0 0 0 0 0 0 4 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ARG183 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) LYS184 0 0 0 0 0 0 0 0 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) LYS204 0 9 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ARG205 0 0 0 3 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence amknyyssnptfylgidciifgfnegeisllllkrnfepamgewslmggfvqkdesvddaakrvlaeltglenvymeqvgafgaidrdpgervvsiayyalinineydrelvqkhnaywvninelpalifdhpemvdkaremmkqkasvepigfnllpklftlsqlqslyeaiygepmDKRNfRKrvaemdfiektdkidklgsKRgaalykfngkayrkdpkfkl >5ddg_AB: title=THE STRUCTURE OF TRANSCRIPTIONAL FACTOR ARAR FROM BACTEROIDES THETAIOTAOMICRON VPI IN COMPLEX WITH TARGET DOUBLE STRAND DNA organism=? DNA sequence DG(C1):DC(D27) DC(C2):DG(D26) DA(C3):DT(D25) DA(C4):DT(D24) DA(C5):DT(D23) DA(C6):DT(D22) DG(C7):DC(D21) DT(C8):DA(D20) DG(C9):DC(D19) DT(C10):DA(D18) DT(C11):DA(D17) DA(C12):DT(D16) DC(C13):DG(D15) DT(C14):DA(D14) DT(C15):DA(D13) DT(C16):DA(D12) DT(C17):DA(D11) DA(C18):DT(D10) DC(C19):DG(D9) DA(C20):DT(D8) DC(C21):DG(D7) DC(C22):DG(D6) DC(C23):DG(D5) DA(C24):DT(D4) DT(C25):DA(D3) DG(C26):DC(D2) DC(C27):DG(D1) chainA (179) ASP178 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) LYS179 0 0 0 0 0 5 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG180 0 0 0 0 0 0 0 42 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) ASN181 0 0 0 0 0 0 0 0 4 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ARG183 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) LYS184 0 0 0 0 0 0 0 0 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) LYS204 0 9 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ARG205 0 0 0 3 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (176) ASP178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (177) LYS179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 5 0 0 0 0 0 (178) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 44 0 0 0 0 0 0 0 (179) ASN181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 11 4 0 0 0 0 0 0 0 0 (181) ARG183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (182) LYS184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 (202) LYS204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 7 0 (203) ARG205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 4 0 0 0 prot.sequence amknyyssnptfylgidciifgfnegeisllllkrnfepamgewslmggfvqkdesvddaakrvlaeltglenvymeqvgafgaidrdpgervvsiayyalinineydrelvqkhnaywvninelpalifdhpemvdkaremmkqkasvepigfnllpklftlsqlqslyeaiygepmDKRNfRKrvaemdfiektdkidklgsKRgaalykfngkayrkdpkfkl/nyyssnptfylgidciifgfnegeisllllkrnfepamgewslmggfvqkdesvddaakrvlaeltglenvymeqvgafgaidrdpgervvsiayyalinineydrelvqkhnaywvninelpalifdhpemvdkaremmkqkasvepigfnllpklftlsqlqslyeaiygepmDKRNfRKrvaemdfiektdkidklgsKRgaalykfngkayrkdpkfkl >5ddm_B:Nucleotidyltransferase;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE LAMBDA- APOENZYME AND COMPLEX WITH 6 PAIRED DNA organism=Homo sapiens DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) chainB (136) GLN464 0 0 1 0 0 0 (177) TYR505 0 0 0 0 9 6 (182) ALA510 0 0 0 0 0 8 (185) ASN513 0 0 0 0 0 8 (186) ARG514 0 0 0 0 0 21 (189) ARG517 0 0 0 0 3 13 prot.sequence sesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsQeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >5deu_A: title=CRYSTAL STRUCTURE OF TET2-5HMC COMPLEX organism=HOMO SAPIENS DNA sequence DA(B1):DT(C12) DC(B2):DG(C11) DC(B3):DG(C10) DA(B4):DT(C9) DC(B5):DG(C8) DG(B7):DG(C7) DG(B8):DC(C5) DT(B9):DA(C4) DG(B10):DC(C3) DG(B11):DC(C2) chainA (160) TRP1291 0 0 0 0 6 0 0 0 0 0 (162) MET1293 0 0 0 0 19 8 0 0 0 0 (163) TYR1294 0 0 0 0 0 38 0 0 0 0 (164) TYR1295 0 0 0 0 0 3 3 0 0 0 (171) ARG1302 0 0 0 0 0 0 2 1 0 0 prot.sequence scrcveqiiekdegpfythlgagpnvaaireimeerfgqkgkairierviytgkegkssqgcpiakwvvrrssseekllclvreraghtceaavivililvwegiplsladklyseltetlrkygtltnrrcalneertcacqgldpetcgasfsfgcsWSMYYngckfaRskiprkfkllgddpkeeekleshlqnlstlmaptykklapdaynnqieyehrapecrlglkegrpfsgvtacldfcahahrdlhnmqngstlvctltrednrefggkpedeqlhvlplykvsdvdefgsveaqeekkrsgaiqvlssfrrkvrmlaepvktcgsdevwsdseqsfldpdiggvavapthgsiliecakrelhattplknpnrnhptrislvfyqhksmnepkhglalweakm >5dff_A:DNase_I-like; title=HUMAN APE1 PRODUCT COMPLEX organism=Homo sapiens DNA sequence DC(D2):DG(V10) DG(D3):DC(V9) DA(D4):DT(V8) DC(D5):DG(V7) DG(D6):DC(V6) DG(D7):DC(V5) DA(D8):DT(V4) DT(D9):DA(V3) DC(D10):DG(V2) DC(D11):DG(V1) chainA (135) ARG177 23 0 0 0 0 0 0 0 0 0 (187) ASN229 3 0 0 0 0 0 0 0 0 0 (228) MET270 1 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetkcsenklpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtyMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >5dfh_A:DNase_I-like; title=HUMAN APE1 MISMATCH PRODUCT COMPLEX organism=Homo sapiens DNA sequence DG(V1):DC(D11) DG(V2):DC(D10) DA(V3):DT(D9) DT(V4):DA(D8) DC(V5):DG(D7) DC(V6):DG(D6) DG(V7):DC(D5) DT(V8):DA(D4) DC(V9):DG(D3) DG(V10):DC(D2) chainA (135) ARG177 0 0 0 0 0 0 0 0 0 21 (186) ASN229 0 0 0 0 0 0 0 0 0 4 (227) MET270 0 0 0 0 0 0 0 0 0 3 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetkcsenklpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglarkplvlcgdlnvaheeidlrnpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtyMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >5dfi_A:DNase_I-like; title=HUMAN APE1 PHOSPHOROTHIOATE SUBSTRATE COMPLEX organism=Homo sapiens DNA sequence DG(V1):DC(P21) DG(V2):DC(P20) DA(V3):DT(P19) DT(V4):DA(P18) DC(V5):DG(P17) DC(V6):DG(P16) DG(V7):DC(P15) DT(V8):DA(P14) DC(V9):DG(P13) DG(V10):DC(P12) DG(V11):48Z(P11) DG(V12):OMC(P10) DC(V13):DG(P9) DG(V14):DC(P8) DC(V15):DG(P7) DA(V16):DT(P6) DT(V17):DA(P5) DC(V18):DG(P4) DA(V19):DT(P3) DG(V20):DC(P2) DC(V21):DG(P1) chainA ( 56) LYS98 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 ( 86) TYR128 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 (132) ASN174 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 (135) ARG177 0 0 0 0 0 0 0 0 0 0 13 30 0 0 0 0 0 0 0 0 0 (170) ASN212 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (187) ASN229 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 (188) ALA230 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (224) PHE266 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 (227) TYR269 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (228) MET270 0 0 0 0 0 0 0 0 0 0 9 13 0 0 0 0 0 0 0 0 0 (229) MET271 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 (238) TRP280 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 (240) LEU282 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegYsgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMMnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >5dfj_A:DNase_I-like; title=HUMAN APE1 E96Q/D210N MISMATCH SUBSTRATE COMPLEX organism=Homo sapiens DNA sequence DG(P1):DC(V21) DC(P2):DG(V20) DT(P3):DA(V19) DG(P4):DC(V18) DA(P5):DT(V17) DT(P6):DA(V16) DG(P7):DC(V15) DC(P8):DG(V14) DG(P9):DC(V13) DT(P10):DG(V12) 3DR(P11):DG(V11) DC(P12):DG(V10) DG(P13):DC(V9) DA(P14):DT(V8) DC(P15):DG(V7) DG(P16):DC(V6) DG(P17):DC(V5) DA(P18):DT(V4) DT(P19):DA(V3) DC(P20):DG(V2) DC(P21):DG(V1) chainA ( 56) LYS98 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) TYR128 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) ARG177 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (187) ASN229 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (227) TYR269 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (228) MET270 0 0 0 0 0 0 0 0 0 6 8 1 0 0 0 0 0 0 0 0 0 (229) MET271 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 (266) ASP308 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqqtKcsenklpaelqelpglshqywsapsdkegYsgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgnlnvaheeidlrnpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMMnarsknvgwrldyfllshsllpalcdskirskalgsDhcpitlylal >5dg0_A:DNase_I-like; title=HUMAN APE1 PHOSPHOROTHIOATE SUBSTRATE COMPLEX WITH MN2+ organism=Homo sapiens DNA sequence DG(P1):DC(V21) DC(P2):DG(V20) DT(P3):DA(V19) DG(P4):DC(V18) DA(P5):DT(V17) DT(P6):DA(V16) DG(P7):DC(V15) DC(P8):DG(V14) DG(P9):DC(V13) OMC(P10):DG(V12) 48Z(P11):DG(V11) DC(P12):DG(V10) DG(P13):DC(V9) DA(P14):DT(V8) DC(P15):DG(V7) DG(P16):DC(V6) DG(P17):DC(V5) DA(P18):DT(V4) DT(P19):DA(V3) DC(P20):DG(V2) DC(P21):DG(V1) chainA ( 56) LYS98 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) TYR128 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) ASN174 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 (135) ARG177 0 0 0 0 0 0 0 0 0 46 5 0 0 0 0 0 0 0 0 0 0 (170) ASN212 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (187) ASN229 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (188) ALA230 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (224) PHE266 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 (227) TYR269 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (228) MET270 0 0 0 0 0 0 0 0 0 26 7 0 0 0 0 0 0 0 0 0 0 (229) MET271 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 (238) TRP280 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 (240) LEU282 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegYsgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMMnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >5dg8_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING DAMPNPP ACROSS A DNA TEMPLATE CONTAINING 1,N6-ETHENODEOXYADENOSINE LESION organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 2 0 0 0 0 0 0 (376) LEU378 0 3 2 0 0 0 0 0 (380) ARG382 0 0 0 0 10 14 0 0 (421) PHE423 0 4 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >5dg9_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING DGMPNPP ACROSS A DNA TEMPLATE CONTAINING 1,N6-ETHENODEOXYADENOSINE LESION organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 6 2 0 0 0 0 0 (380) ARG382 0 0 0 0 11 14 0 0 (421) PHE423 0 2 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >5dga_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA EXTENDING AN 1,N6- ETHENODEOXYADENOSINE : DT PAIR BY INSERTING DTMPNPP OPPOSITE TEMPLATE DA organism=Homo sapiens DNA sequence DA(T4):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 39) GLN38 6 0 0 0 0 0 0 0 ( 49) ILE48 4 0 0 0 0 0 0 0 ( 62) ARG61 1 0 0 0 0 0 0 0 (318) SER322 0 4 0 0 0 0 0 0 (374) LEU378 0 4 2 0 0 0 0 0 (378) ARG382 0 0 0 0 11 19 0 0 prot.sequence hmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5dgb_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA EXTENDING AN 1,N6- ETHENODEOXYADENOSINE : DA PAIR BY INSERTING DTMPNPP OPPOSITE TEMPLATE DA organism=Homo sapiens DNA sequence DA(T4):DA(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 41) GLN38 6 0 0 0 0 0 0 0 ( 51) ILE48 3 0 0 0 0 0 0 0 ( 64) ARG61 1 0 0 0 0 0 0 0 (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 3 2 0 0 0 0 0 (380) ARG382 0 0 0 0 10 16 0 0 (421) PHE423 0 1 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >5dlf_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING DATP OPPOSITE O4-METHYLHYMIDINE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 2 7 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5dlg_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING DGMPNPP OPPOSITE O4-METHYLHYMIDINE organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA ( 64) ARG61 0 0 0 0 0 0 0 9 (320) SER322 0 0 0 0 0 0 4 1 (380) ARG382 0 0 16 9 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5dlj_ABCDEF: title=CRYSTAL STRUCTURE OF CAS-DNA-N1 COMPLEX organism=ESCHERICHIA COLI K12 DNA sequence DC(G7):DG(H29) DG(G8):DC(H28) DT(G9):DA(H27) DA(G10):DT(H26) DG(G11):DC(H25) DC(G12):DG(H24) DT(G13):DA(H23) DG(G14):DC(H22) DA(G15):DT(H21) DG(G16):DC(H20) DG(G17):DC(H19) DG(G18):DC(H18) DC(G19):DG(H17) DC(G20):DG(H16) DT(G21):DA(H15) DC(G22):DG(H14) DA(G23):DT(H13) DG(G24):DC(H12) DC(G25):DG(H11) DT(G26):DA(H10) DA(G27):DT(H9) DC(G28):DG(H8) DG(G29):DC(H7) chainD ( 8) TYR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 ( 42) PRO56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 66) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainC chainA ( 8) TYR22 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) PRO56 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) GLU80 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainF chainE prot.sequence vsmiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa/twlplnpIplkdrvsmiflqygqidvidgafvlidktgirtHipvgsvacimlepgtrvshaavrLaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa/twlplnpIplkdrvsmiflqygqidvidgafvlidktgirtHipvgsvacimlepgtrvshaavrLaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa/vsmiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa/msmlvvvTenvpprlrgrlaiwllevragvyvgdvsakireMiweqiaglaeegnvvmawatnteTgfefqtfglnrr/msmlvvvTenvpprlrgrlaiwllevragvyvgdvsakireMiweqiaglaeegnvvmawatnteTgfefqtfglnrr >5dlj_D: title=CRYSTAL STRUCTURE OF CAS-DNA-N1 COMPLEX organism=ESCHERICHIA COLI K12 DNA sequence DC(G7):DG(H29) DG(G8):DC(H28) DT(G9):DA(H27) DA(G10):DT(H26) DG(G11):DC(H25) DC(G12):DG(H24) DT(G13):DA(H23) DG(G14):DC(H22) DA(G15):DT(H21) DG(G16):DC(H20) DG(G17):DC(H19) DG(G18):DC(H18) DC(G19):DG(H17) DC(G20):DG(H16) DT(G21):DA(H15) DC(G22):DG(H14) DA(G23):DT(H13) DG(G24):DC(H12) DC(G25):DG(H11) DT(G26):DA(H10) DA(G27):DT(H9) DC(G28):DG(H8) DG(G29):DC(H7) chainD ( 8) TYR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 ( 42) PRO56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 66) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence vsmiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa >5dnm_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE CONTAINING ADDUCTS OF RUTHENIUM(II)-TOLUENE PTA COMPLEX organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DA(J-52):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DT(J-21):DT(I22) DC(J-20):DA(I21) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J34):DG(I-33) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgisskaMsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >5dnn_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE CONTAINING ADDUCTS OF GOLD(I)- TRIETHYLPHOSPHANE AND RUTHENIUM(II)-TOLUENE PTA COMPLEXES organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DA(J-52):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DT(J-21):DT(I22) DC(J-20):DA(I21) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J34):DG(I-33) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgisskaMsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >5dnn_D:Histone-fold; title=NUCLEOSOME CORE PARTICLE CONTAINING ADDUCTS OF GOLD(I)- TRIETHYLPHOSPHANE AND RUTHENIUM(II)-TOLUENE PTA COMPLEXES organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DA(J-52):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DT(J-21):DT(I22) DC(J-20):DA(I21) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J34):DG(I-33) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >5dny_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF THE ATPRS-MRE11/RAD50-DNA COMPLEX organism=? DNA sequence DG(F-25):DC(E25) DA(F-24):DT(E24) DA(F-23):DT(E23) DT(F-22):DA(E22) DG(F-21):DC(E21) DT(F-20):DA(E20) DG(F-19):DC(E19) DT(F-18):DA(E18) DG(F-17):DC(E17) DT(F-16):DA(E16) DC(F-15):DG(E15) DT(F-14):DA(E14) DC(F-13):DG(E13) DA(F-12):DT(E12) DA(F-11):DT(E11) DT(F-10):DA(E10) DC(F-9):DG(E9) DC(F-8):DG(E8) DC(F-7):DG(E7) DA(F-6):DT(E6) DA(F-5):DT(E5) DC(F-4):DG(E4) chainB ( 54) SER54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 ( 92) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 6 prot.sequence msmilkeirmnnfkshvnsrikfekgivaiigengsgkssifeavffalfgagSnfnydtiitkgkksvyveldfevngnnykiireydsgRggaklykngkpyattisavnkavneilgvdrnmflnsiyikqgeiakflslkpsekletvakllgidefekcyqkmgeivkeyekrleriegekemsnlekekekltkfveyldkvrrifgrngfqaylrekyvpliqkylneafsefdlpysfveltkdfevrvhapngvltidnlsggeqiavalslrlaianalignrveciildeptvyldenrraklaeifrkvksipqmiiithhreledvadviinvkkdgnvskvking >5dny_BD:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF THE ATPRS-MRE11/RAD50-DNA COMPLEX organism=? DNA sequence DG(E4):DC(F-4) DT(E5):DA(F-5) DT(E6):DA(F-6) DG(E7):DC(F-7) DG(E8):DC(F-8) DG(E9):DC(F-9) DA(E10):DT(F-10) DT(E11):DA(F-11) DT(E12):DA(F-12) DG(E13):DC(F-13) DA(E14):DT(F-14) DG(E15):DC(F-15) DA(E16):DT(F-16) DC(E17):DG(F-17) DA(E18):DT(F-18) DC(E19):DG(F-19) DA(E20):DT(F-20) DC(E21):DG(F-21) DA(E22):DT(F-22) DT(E23):DA(F-23) DT(E24):DA(F-24) DC(E25):DG(F-25) chainB ( 54) SER54 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG92 6 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 54) SER54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 1 0 0 0 ( 92) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence msmilkeirmnnfkshvnsrikfekgivaiigengsgkssifeavffalfgagSnfnydtiitkgkksvyveldfevngnnykiireydsgRggaklykngkpyattisavnkavneilgvdrnmflnsiyikqgeiakflslkpsekletvakllgidefekcyqkmgeivkeyekrleriegekemsnlekekekltkfveyldkvrrifgrngfqaylrekyvpliqkylneafsefdlpysfveltkdfevrvhapngvltidnlsggeqiavalslrlaianalignrveciildeptvyldenrraklaeifrkvksipqmiiithhreledvadviinvkkdgnvskvking/msmilkeirmnnfkshvnsrikfekgivaiigengsgkssifeavffalfgagSnfnydtiitkgkksvyveldfevngnnykiireydsgRggaklykngkpyattisavnkavneilgvdrnmflnsiyikqgeiakflslkpsekletvakllgidefekcyqkmgeivkeyekrleriegelnynlekekekltkfveyldkvrrifgrngfqaylrekyvpliqkylneafsefdlpysfveltkdfevrvhapngvltidnlsggeqiavalslrlaianalignrveciildeptvyldenrraklaeifrkvksipqmiiithhreledvadviinvkkdgnvskvking >5dqg_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING DAMPNPP OPPOSITE O4-ETHYLTHYMIDINE organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 3 0 (376) LEU378 0 0 0 0 0 2 3 0 (380) ARG382 0 0 13 13 0 0 0 0 (421) PHE423 0 0 0 0 0 0 1 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >5dqh_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING DGMPNPP OPPOSITE O4-ETHYLTHYMIDINE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 5 2 0 0 0 0 0 (380) ARG382 0 0 0 0 9 15 0 0 (421) PHE423 0 1 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >5dqi_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA EXTENDING AN O4- ETHYLTHYMIDINE : DA PAIR BY INSERTING DCTP OPPOSITE DG organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DA(P8):DG(T4) DC(P9):DT(T3) chainA ( 37) GLN38 0 0 0 0 0 0 0 10 1 ( 47) ILE48 0 0 0 0 0 0 0 6 4 ( 60) ARG61 0 0 0 0 0 0 0 0 4 ( 61) SER62 0 0 0 0 0 0 0 0 5 ( 63) TRP64 0 0 0 0 0 0 0 0 1 (110) ARG111 0 0 0 0 0 0 0 0 11 (112) SER113 0 0 0 0 0 0 0 0 6 (113) ILE114 0 0 0 0 0 0 0 0 1 (314) SER322 0 0 0 0 0 0 1 0 0 (370) LEU378 0 0 0 0 1 1 0 0 0 (374) ARG382 0 0 5 0 0 0 0 0 0 prot.sequence atgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtRSmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieRaSIdeayvdltsavqerlqklqgqpisadllpstyieglpqgvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5dqt_ABCDEFK: title=CRYSTAL STRUCTURE OF CAS-DNA-22 COMPLEX organism=? DNA sequence DT(H6):DT(G29) DG(H7):DC(G28) DC(H8):DG(G27) DA(H9):DT(G26) DT(H10):DA(G25) DC(H11):DG(G24) DG(H12):DC(G23) DA(H13):DT(G22) DC(H14):DG(G21) DT(H15):DA(G20) DC(H16):DG(G19) DA(H17):DT(G18) DA(H18):DT(G17) DC(H19):DG(G16) DT(H20):DA(G15) DC(H21):DG(G14) DA(H22):DT(G13) DG(H23):DC(G12) DC(H24):DG(G11) DT(H25):DA(G10) DA(H26):DT(G9) DC(H27):DG(G8) DG(H28):DC(G7) chainD ( 8) TYR22 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) PRO56 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) GLU80 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainA ( 8) TYR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 ( 42) PRO56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 66) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainB chainF chainE chainK prot.sequence vsmiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa/twlplnpIplkdrvsmiflqgqidvidgafvlidktgirthIpvgsvacimlepgtrvshaavrlAaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa/twlplnpIplkdrvsmiflqygqidvidgafvlidktgirtHipvgsvacimlepgtrvshaavrLaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqp/vsmiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwnekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpdrevrlacrdifrssktlaklipliedvlaageiqppa/msmlvvvTenvpprlrgrlaiwllevragvyvgdvsakireMiweqiaglaeegnvvmawatnteTgfefqtfglnrrtpvdldglrlvsflp/msmlvvvTenvpprlrgrlaiwllevragvyvgdvsakireMiweqiaglaeegnvvmawatnteTgfefqtfglnrrtpvdldglrlvsflp/twlplnpIplkdrvsmiflqygqidvidgafvlidktgirtHipvgsvacimlepgtrvshaavrLaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqp >5dqt_IJLMN: title=CRYSTAL STRUCTURE OF CAS-DNA-22 COMPLEX organism=ESCHERICHIA COLI K12 DNA sequence DT(P6):DT(O29) DG(P7):DC(O28) DC(P8):DG(O27) DA(P9):DT(O26) DT(P10):DA(O25) DC(P11):DG(O24) DG(P12):DC(O23) DA(P13):DT(O22) DC(P14):DG(O21) DT(P15):DA(O20) DC(P16):DG(O19) DA(P17):DT(O18) DA(P18):DT(O17) DC(P19):DG(O16) DT(P20):DA(O15) DC(P21):DG(O14) DA(P22):DT(O13) DG(P23):DC(O12) DC(P24):DG(O11) DT(P25):DA(O10) DA(P26):DT(O9) DC(P27):DG(O8) DG(P28):DC(O7) chainL ( 8) TYR22 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) PRO56 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) GLU80 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI ( 8) TYR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 ( 42) PRO56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 66) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainJ chainN chainM prot.sequence vsmiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa/twlplnpIplkdrvsmiflqygqidvidgafvlidktgirtHipvgsvacimlepgtrvshaavrLaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa/vsmiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa/msmlvvvTenvpprlrgrlaiwllevragvyvgdvsakireMiweqiaglaeegnvvmawatnteTgfefqtfglnrrtpvdldglrlvsfl/msmlvvvTenvpprlrgrlaiwllevragvyvgdvsakireMiweqiaglaeegnvvmawatnteTgfefqtfglnrrtpvdldglrlvsfl >5dqu_AB: title=CRYSTAL STRUCTURE OF CAS-DNA-10 COMPLEX organism=ESCHERICHIA COLI K12 DNA sequence DG(G11):DC(H10) DC(G12):DG(H9) DA(G13):DT(H8) DT(G14):DA(H7) DC(G15):DG(H6) DG(G16):DC(H5) DA(G17):DT(H4) DT(G19):DA(H2) chainA ( 8) TYR22 23 0 0 0 0 0 0 0 ( 42) PRO56 2 0 0 0 0 0 0 0 chainB prot.sequence vsmiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparsveqlrgiegsrvratyallakqygvtwngrrydpgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqpp/wlplnpiPlkdrvsmiflqygqidvidgafvlidktgirthIpvgsvacimlepgtrvshaavrlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiq >5dqu_CDF: title=CRYSTAL STRUCTURE OF CAS-DNA-10 COMPLEX organism=ESCHERICHIA COLI K12 DNA sequence DG(J7):DC(I610) DC(J8):DG(I609) DA(J9):DT(I608) DT(J10):DA(I607) DC(J11):DG(I606) DG(J12):DC(I605) DA(J13):DT(I604) DT(J15):DA(I602) chainD ( 8) TYR22 22 0 0 0 0 0 0 0 ( 42) PRO56 2 0 0 0 0 0 0 0 chainC chainF prot.sequence wlplnpiplkdrvsmiflqygqidvidgafvlidktgirthipvgsvacimlepgtrvshaavrlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppap/vsmiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrpaparveqlrgiegsrvratyallakqygvtwngrrydpgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppap/smlvvvtEnvpprlrgrlaiwllevragvyvgdvsakiremIweqiaglaeegnvvmawatntetgfefqtfglnrrtpvdldglrlvsflp >5dqz_ABCDEF: title=CRYSTAL STRUCTURE OF CAS-DNA-PAM COMPLEX organism=ESCHERICHIA COLI K12 DNA sequence DC(H7):DG(G29) DG(H8):DC(G28) DT(H9):DA(G27) DA(H10):DT(G26) DG(H11):DC(G25) DC(H12):DG(G24) DT(H13):DA(G23) DG(H14):DC(G22) DA(H15):DT(G21) DG(H16):DC(G20) DG(H17):DC(G19) DC(H18):DG(G18) DC(H19):DG(G17) DC(H20):DG(G16) DT(H21):DA(G15) DC(H22):DG(G14) DA(H23):DT(G13) DG(H24):DC(G12) DC(H25):DG(G11) DT(H26):DA(G10) DA(H27):DT(G9) DC(H28):DG(G8) DG(H29):DC(G7) chainD ( 8) TYR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 ( 42) PRO56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 66) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 chainC chainA ( 8) TYR22 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) PRO56 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) GLU80 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainF chainE prot.sequence vsmiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa/twlplnpIplkdrvsmiflqygqidvidgafvlidktgirtHipvgsvacimlepgtrvshaavrLaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkkgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppappedaqpvaiplpvslgdaghrss/twlplnpIplkdrvsmiflqygqidvidgafvlidktgirtHipvgsvacimlepgtrvshaavrLaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppappedaqpvaiplpvslgdaghrss/vsmiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa/msmlvvvTenvpprlrgrlaiwllevragvyvgdvsakireMiweqiaglaeegnvvmawatnteTgfefqtfglnrrtpvdldglrlvsflpv/msmlvvvTenvpprlrgrlaiwllevragvyvgdvsakireMiweqiaglaeegnvvmawatnteTgfefqtfglnrrtpvdldglrlvsflpv >5ds4_ABCDEF: title=CRYSTAL STRUCTURE THE ESCHERICHIA COLI CAS1-CAS2 COMPLEX BOUND TO PROTOSPACER DNA organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(G1):DT(H23) DA(G2):DT(H22) DA(G3):DT(H21) DC(G4):DG(H20) DA(G5):DT(H19) DC(G6):DG(H18) DC(G7):DG(H17) DA(G8):DT(H16) DG(G9):DC(H15) DA(G10):DT(H14) DA(G11):DT(H13) DC(G12):DG(H12) DG(G13):DC(H11) DA(G14):DT(H10) DG(G15):DC(H9) DT(G16):DA(H8) DA(G17):DT(H7) DG(G18):DC(H6) DT(G19):DA(H5) DA(G20):DT(H4) DA(G21):DT(H3) DA(G22):DT(H2) DT(G23):DA(H1) chainA ( 8) TYR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 ( 42) PRO56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 66) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainB chainC ( 7) TYR22 59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PRO56 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) GLU80 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE chainF prot.sequence vsmiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa/lplnpipLkdrvsmiflqygqidvidgafvlidktgirthiPvgsvacimlepgtrvshaavrlaAqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqp/smiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqpp/lplnpiPlkdrvsmiflqygqidvidgafvlidktgirthIpvgsvacimlepgtrvshaavrlAaqvgtllvwvgeagvrvyasgqpgarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvl/msmlvvVtenvpprlrgrlaiwllevragvyvgdvsakirEmiweqiaglaeegnvvmawatntEtgfefqtfglnrrtpvdldglrlvsflp/msmlvvVtenvpprlrgrlaiwllevragvyvgdvsakirEmiweqiaglaeegnvvmawatntEtgfefqtfglnrrtpvdldglrlvsflpv >5ds4_C: title=CRYSTAL STRUCTURE THE ESCHERICHIA COLI CAS1-CAS2 COMPLEX BOUND TO PROTOSPACER DNA organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(H1):DT(G23) DT(H2):DA(G22) DT(H3):DA(G21) DT(H4):DA(G20) DA(H5):DT(G19) DC(H6):DG(G18) DT(H7):DA(G17) DA(H8):DT(G16) DC(H9):DG(G15) DT(H10):DA(G14) DC(H11):DG(G13) DG(H12):DC(G12) DT(H13):DA(G11) DT(H14):DA(G10) DC(H15):DG(G9) DT(H16):DA(G8) DG(H17):DC(G7) DG(H18):DC(G6) DT(H19):DA(G5) DG(H20):DC(G4) DT(H21):DA(G3) DT(H22):DA(G2) DT(H23):DA(G1) chainC ( 7) TYR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59 ( 41) PRO56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 65) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence smiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqpp >5ds5_ABCDEF: title=CRYSTAL STRUCTURE THE ESCHERICHIA COLI CAS1-CAS2 COMPLEX BOUND TO PROTOSPACER DNA AND MG organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(H1):DT(G23) DT(H2):DA(G22) DT(H3):DA(G21) DT(H4):DA(G20) DA(H5):DT(G19) DC(H6):DG(G18) DT(H7):DA(G17) DA(H8):DT(G16) DC(H9):DG(G15) DT(H10):DA(G14) DC(H11):DG(G13) DG(H12):DC(G12) DT(H13):DA(G11) DT(H14):DA(G10) DC(H15):DG(G9) DT(H16):DA(G8) DG(H17):DC(G7) DG(H18):DC(G6) DT(H19):DA(G5) DG(H20):DC(G4) DT(H21):DA(G3) DT(H22):DA(G2) DT(H23):DA(G1) chainA ( 7) TYR22 58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PRO56 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 7) TYR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53 ( 22) LYS37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 41) PRO56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 65) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainD chainE chainF prot.sequence smiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaage/lplnpiPlkdrvsmiflqygqidvidgafvlidktgirthIpvgsvacimlepgtrvshaavrlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqpp/smiflqYgqidvidgafvlidKtgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaagei/wlplnpIplkdrvsmiflqygQidvidgafvlidktgirtHipvgsvacimlepgtrvshaavrLaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqp/msmlvvVtenvpprlrgrlaiWllevragvyvgdvsakirEmiweqiaglaeegnvvmawatntEtgfefqtfglnrrtpvdldglrlvsflpv/msmlvvVtenvpprlrgrlaiWllevragvyvgdvsakirEmiweqiaglaeegnvvmawatntEtgfefqtfglnrrtpvdldglrlvsflpv >5ds5_C: title=CRYSTAL STRUCTURE THE ESCHERICHIA COLI CAS1-CAS2 COMPLEX BOUND TO PROTOSPACER DNA AND MG organism=? DNA sequence DA(G1):DT(H23) DA(G2):DT(H22) DA(G3):DT(H21) DC(G4):DG(H20) DA(G5):DT(H19) DC(G6):DG(H18) DC(G7):DG(H17) DA(G8):DT(H16) DG(G9):DC(H15) DA(G10):DT(H14) DA(G11):DT(H13) DC(G12):DG(H12) DG(G13):DC(H11) DA(G14):DT(H10) DG(G15):DC(H9) DT(G16):DA(H8) DA(G17):DT(H7) DG(G18):DC(H6) DT(G19):DA(H5) DA(G20):DT(H4) DA(G21):DT(H3) DA(G22):DT(H2) DT(G23):DA(H1) chainC ( 7) TYR22 53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS37 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PRO56 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) GLU80 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smiflqYgqidvidgafvlidKtgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaagei >5ds6_ABCDEF: title=CRYSTAL STRUCTURE THE ESCHERICHIA COLI CAS1-CAS2 COMPLEX BOUND TO PROTOSPACER DNA WITH SPLAYED ENDS organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(G2):DT(H24) DA(G3):DT(H23) DA(G4):DT(H22) DC(G5):DG(H21) DA(G6):DT(H20) DC(G7):DG(H19) DC(G8):DG(H18) DA(G9):DT(H17) DG(G10):DC(H16) DA(G11):DT(H15) DA(G12):DT(H14) DC(G13):DG(H13) DG(G14):DC(H12) DA(G15):DT(H11) DG(G16):DC(H10) DT(G17):DA(H9) DA(G18):DT(H8) DG(G19):DC(H7) DT(G20):DA(H6) DA(G21):DT(H5) DA(G22):DT(H4) DA(G23):DT(H3) DT(G24):DA(H2) chainA ( 8) TYR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53 ( 42) PRO56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 66) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainB chainC ( 7) TYR22 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PRO56 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) GLU80 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE chainF prot.sequence vsmiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqppa/lplnpipLkdrvsmiflqygqidvidgafvlidktgirthiPvgsvacimlepgtrvshaavrlaAqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqp/smiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqpp/lplnpiPlkdrvsmiflqygqidvidgafvlidktgirthIpvgsvacimlepgtrvshaavrlAaqvgtllvwvgeagvrvyasgqpgarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvl/msmlvvVtenvpprlrgrlaiwllevragvyvgdvsakirEmiweqiaglaeegnvvmawatntEtgfefqtfglnrrtpvdldglrlvsflp/msmlvvVtenvpprlrgrlaiwllevragvyvgdvsakirEmiweqiaglaeegnvvmawatntEtgfefqtfglnrrtpvdldglrlvsflpv >5ds6_C: title=CRYSTAL STRUCTURE THE ESCHERICHIA COLI CAS1-CAS2 COMPLEX BOUND TO PROTOSPACER DNA WITH SPLAYED ENDS organism=? DNA sequence DA(H2):DT(G24) DT(H3):DA(G23) DT(H4):DA(G22) DT(H5):DA(G21) DA(H6):DT(G20) DC(H7):DG(G19) DT(H8):DA(G18) DA(H9):DT(G17) DC(H10):DG(G16) DT(H11):DA(G15) DC(H12):DG(G14) DG(H13):DC(G13) DT(H14):DA(G12) DT(H15):DA(G11) DC(H16):DG(G10) DT(H17):DA(G9) DG(H18):DC(G8) DG(H19):DC(G7) DT(H20):DA(G6) DG(H21):DC(G5) DT(H22):DA(G4) DT(H23):DA(G3) DT(H24):DA(G2) chainC ( 7) TYR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 ( 41) PRO56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 65) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence smiflqYgqidvidgafvlidktgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqpp >5ds9_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F1-8A (AAATTAGTTTGAATTTTGAGCTAATTT) organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DA(D6):DT(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DA(D11):DT(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DC(D17):DG(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DT(D22):DA(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 77) ASN84 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 7 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS90 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRKklkkygmn >5ds9_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F1-8A (AAATTAGTTTGAATTTTGAGCTAATTT) organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DA(C6):DT(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DA(C12):DT(D16) DA(C13):DT(D15) DT(C14):DA(D14) DT(C15):DA(D13) DT(C16):DA(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DT(C22):DA(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 7 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 83) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainB ( 84) ASN84 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 7 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRKklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlRkklkkygmn >5dtd_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F1-8C (AAATTCGTTTGAATTTTGAGCGAATTT) organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DC(D6):DG(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DA(D11):DT(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DC(D17):DG(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DG(D22):DC(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 77) ASN84 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 9 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRkklkkygmn >5dtd_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F1-8C (AAATTCGTTTGAATTTTGAGCGAATTT) organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DC(C6):DG(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DA(C12):DT(D16) DA(C13):DT(D15) DT(C14):DA(D14) DT(C15):DA(D13) DT(C16):DA(D12) DT(C17):DA(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DG(C22):DC(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 9 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 chainB ( 84) ASN84 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 9 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlRkklkkygmn >5dui_A:"Winged_helix"_DNA-binding_domain; title=IDENTIFICATION OF A NEW FOXO1 BINDING SITE THAT PRECLUDES CREB BINDING AT THE GLUCOSE-6-PHOSPHATASE CATALYTIC SUBUNIT GENE PROMOTER organism=Homo sapiens DNA sequence DT(D2):DA(C21) DG(D3):DC(C20) DA(D4):DT(C19) DT(D5):DA(C18) DT(D6):DA(C17) DT(D7):DA(C16) DA(D8):DT(C15) DC(D9):DG(C14) DG(D10):DC(C13) DT(D11):DA(C12) DA(D12):DT(C11) DA(D13):DT(C10) DA(D14):DT(C9) DA(D15):DT(C8) DT(D16):DA(C7) DA(D17):DT(C6) DG(D18):DC(C5) DA(D19):DT(C4) DA(D20):DT(C3) DA(D21):DT(C2) chainA ( 46) SER205 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ASN211 0 0 0 0 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) SER212 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ARG214 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) HIS215 0 0 0 0 8 10 16 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ASN216 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) SER218 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU219 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdsnSsagwkNSiRHNlSLhskfirvqnegtgksswwmlnpeggk >5dui_AB:"Winged_helix"_DNA-binding_domain; title=IDENTIFICATION OF A NEW FOXO1 BINDING SITE THAT PRECLUDES CREB BINDING AT THE GLUCOSE-6-PHOSPHATASE CATALYTIC SUBUNIT GENE PROMOTER organism=Homo sapiens DNA sequence DT(C2):DA(D21) DT(C3):DA(D20) DT(C4):DA(D19) DC(C5):DG(D18) DT(C6):DA(D17) DA(C7):DT(D16) DT(C8):DA(D15) DT(C9):DA(D14) DT(C10):DA(D13) DT(C11):DA(D12) DA(C12):DT(D11) DC(C13):DG(D10) DG(C14):DC(D9) DT(C15):DA(D8) DA(C16):DT(D7) DA(C17):DT(D6) DA(C18):DT(D5) DT(C19):DA(D4) DC(C20):DG(D3) DA(C21):DT(D2) chainA ( 46) SER205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 52) ASN211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 0 0 0 0 ( 53) SER212 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 55) ARG214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 ( 56) HIS215 0 0 0 0 0 0 0 0 0 0 0 0 0 16 10 8 0 0 0 0 ( 57) ASN216 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 59) SER218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 ( 60) LEU219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB ( 51) ASN211 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) SER212 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) HIS215 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LEU219 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdsnSsagwkNSiRHNlSLhskfirvqnegtgksswwmlnpeggk/gnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdsnssagwkNSirHnlsLhskfirvqnegtgksswwmlnpeggk >5dwa_A: title=CRYSTAL STRUCTURE OF PRE-SPECIFIC RESTRICTION ENDONUCLEASE AGEI-DNA COMPLEX organism=Thalassobius gelatinovorus DNA sequence DC(D-1):DG(C8) DG(D0):DC(C7) DA(D1):DT(C6) DC(D2):DG(C5) DC(D3):DG(C4) DG(D4):DC(C3) DG(D5):DC(C2) DT(D6):DA(C1) DC(D7):DG(C0) DG(D8):DC(C-1) chainA ( 86) GLN86 0 0 0 0 0 11 14 0 0 0 ( 89) VAL89 0 0 0 0 0 14 7 0 0 0 ( 90) ARG90 0 0 0 0 0 0 3 7 13 3 (120) LYS120 0 0 0 0 0 0 0 0 3 7 (172) ALA172 0 0 2 0 1 0 0 0 0 0 (173) GLU173 0 0 2 0 0 0 0 0 0 0 (174) ARG174 0 0 0 0 14 11 0 0 0 0 (200) LYS200 0 0 7 4 0 0 0 0 0 0 (202) PHE202 7 4 4 0 0 0 0 0 0 0 (203) PRO203 0 0 1 0 0 0 0 0 0 0 (206) HIS206 0 5 5 0 0 0 0 0 0 0 prot.sequence mrldldfgrglvahvmldnvseeqyqqisdyfvplvnkpklksrdaigqafvmatevcpdanpsdlwhhvlyriyirekigtdpsQswVRtsgeafevalverynpvlarhgirltalfKgqkglaltrmgvadrvgsrkvdvmiekqgggrspdaegfgvvggihakvslAERvsddipasrimmgegllsvlstldvKsFPppHgdlvnrgElgtpdrpsdKrnyieghgdfsacfsynlrtspsnattpsgrhiyvsgfsgqddeftdylvaqla >5dwa_AB: title=CRYSTAL STRUCTURE OF PRE-SPECIFIC RESTRICTION ENDONUCLEASE AGEI-DNA COMPLEX organism=Thalassobius gelatinovorus DNA sequence DC(D-1):DG(C8) DG(D0):DC(C7) DA(D1):DT(C6) DC(D2):DG(C5) DC(D3):DG(C4) DG(D4):DC(C3) DG(D5):DC(C2) DT(D6):DA(C1) DC(D7):DG(C0) DG(D8):DC(C-1) chainA ( 86) GLN86 0 0 0 0 0 11 14 0 0 0 ( 89) VAL89 0 0 0 0 0 14 7 0 0 0 ( 90) ARG90 0 0 0 0 0 0 3 7 13 3 (120) LYS120 0 0 0 0 0 0 0 0 3 7 (172) ALA172 0 0 2 0 1 0 0 0 0 0 (173) GLU173 0 0 2 0 0 0 0 0 0 0 (174) ARG174 0 0 0 0 14 11 0 0 0 0 (200) LYS200 0 0 7 4 0 0 0 0 0 0 (202) PHE202 7 4 4 0 0 0 0 0 0 0 (203) PRO203 0 0 1 0 0 0 0 0 0 0 (206) HIS206 0 5 5 0 0 0 0 0 0 0 chainB ( 86) GLN86 0 0 0 14 11 0 0 0 0 0 ( 89) VAL89 0 0 0 7 13 0 0 0 0 0 ( 90) ARG90 3 14 8 4 0 0 0 0 0 0 (172) ALA172 0 0 0 0 0 1 1 2 0 0 (200) LYS200 0 0 0 0 0 0 4 7 0 0 (202) PHE202 0 0 0 0 0 0 0 3 4 5 (203) PRO203 0 0 0 0 0 0 0 2 0 0 prot.sequence mrldldfgrglvahvmldnvseeqyqqisdyfvplvnkpklksrdaigqafvmatevcpdanpsdlwhhvlyriyirekigtdpsQswVRtsgeafevalverynpvlarhgirltalfKgqkglaltrmgvadrvgsrkvdvmiekqgggrspdaegfgvvggihakvslAERvsddipasrimmgegllsvlstldvKsFPppHgdlvnrgElgtpdrpsdKrnyieghgdfsacfsynlrtspsnattpsgrhiyvsgfsgqddeftdylvaqla/mrldldfgrglvahvmldnvseeqyqqisdyfvplvnkpklksrdaigqafvmatevcpdanpsdlwhhvlyriyirekigtdpsQswVRtsgeafevalverynpvlarhgirltalfkgqkglaltrmgvadrvgsrkvdvmiekqgggrspdaegfgvvggihakvslAervsddipasrimmgegllsvlstldvKsFPpphgdlvnrgElgtpdrpsdkrnyieghgdfsacfsynlrtspsnattpsgrhiyvsgfsgqddeftdylvaqla >5dwb_A: title=CRYSTAL STRUCTURE OF SPECIFIC RESTRICTION ENDONUCLEASE AGEI-DNA COMPLEX organism=Thalassobius gelatinovorus DNA sequence DT(C-2):DA(D9) DC(C-1):DG(D8) DG(C0):DC(D7) DA(C1):DT(D6) DC(C2):DG(D5) DC(C3):DG(D4) DG(C4):DC(D3) DG(C5):DC(D2) DT(C6):DA(D1) DC(C7):DG(D0) DG(C8):DC(D-1) DA(C9):DT(D-2) chainA ( 86) GLN86 0 0 0 0 0 0 11 16 0 0 0 0 ( 89) VAL89 0 0 0 0 0 0 11 7 0 0 0 0 ( 90) ARG90 0 0 0 0 0 0 0 3 9 11 1 0 (120) LYS120 0 0 0 0 0 0 0 0 0 5 8 5 (170) SER170 0 0 0 0 0 2 0 0 0 0 0 0 (172) ALA172 0 0 0 1 1 1 0 0 0 0 0 0 (173) GLU173 0 0 0 5 12 6 0 0 0 0 0 0 (174) ARG174 0 0 0 0 0 15 16 0 0 0 0 0 (200) LYS200 0 0 0 6 4 0 0 0 0 0 0 0 (202) PHE202 0 10 5 3 0 0 0 0 0 0 0 0 (203) PRO203 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence mrldldfgrglvahvmldnvseeqyqqisdyfvplvnkpklksrdaigqafvmatevcpdanpsdlwhhvlyriyirekigtdpsQswVRtsgeafevalverynpvlarhgirltalfKgqkglaltrmgvadrvgsrkvdvmiekqgggrspdaegfgvvggihakvSlAERvsddipasrimmgegllsvlstldvKsFPpphgdlvnrgElgtpdrpsdKrnyieghgdfsacfsynlrtspsnattpsgrhiyvsgfsgqddeftdylvaqla >5dwb_AB: title=CRYSTAL STRUCTURE OF SPECIFIC RESTRICTION ENDONUCLEASE AGEI-DNA COMPLEX organism=Thalassobius gelatinovorus DNA sequence DT(D-2):DA(C9) DC(D-1):DG(C8) DG(D0):DC(C7) DA(D1):DT(C6) DC(D2):DG(C5) DC(D3):DG(C4) DG(D4):DC(C3) DG(D5):DC(C2) DT(D6):DA(C1) DC(D7):DG(C0) DG(D8):DC(C-1) DA(D9):DT(C-2) chainA ( 86) GLN86 0 0 0 0 16 11 0 0 0 0 0 0 ( 89) VAL89 0 0 0 0 7 11 0 0 0 0 0 0 ( 90) ARG90 0 1 11 9 3 0 0 0 0 0 0 0 (120) LYS120 5 8 5 0 0 0 0 0 0 0 0 0 (170) SER170 0 0 0 0 0 0 2 0 0 0 0 0 (172) ALA172 0 0 0 0 0 0 1 1 1 0 0 0 (173) GLU173 0 0 0 0 0 0 6 12 5 0 0 0 (174) ARG174 0 0 0 0 0 16 15 0 0 0 0 0 (200) LYS200 0 0 0 0 0 0 0 4 6 0 0 0 (202) PHE202 0 0 0 0 0 0 0 0 3 5 10 0 (203) PRO203 0 0 0 0 0 0 0 0 2 0 0 0 chainB ( 86) GLN86 0 0 0 0 0 0 11 21 0 0 0 0 ( 89) VAL89 0 0 0 0 0 0 11 8 0 0 0 0 ( 90) ARG90 0 0 0 0 0 0 0 4 9 11 3 0 (120) LYS120 0 0 0 0 0 0 0 0 0 1 8 8 (170) SER170 0 0 0 0 0 2 0 0 0 0 0 0 (172) ALA172 0 0 0 0 1 1 0 0 0 0 0 0 (173) GLU173 0 0 0 5 12 6 0 0 0 0 0 0 (174) ARG174 0 0 0 0 0 14 15 0 0 0 0 0 (200) LYS200 0 0 0 5 4 0 0 0 0 0 0 0 (202) PHE202 0 12 5 4 0 0 0 0 0 0 0 0 (203) PRO203 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence mrldldfgrglvahvmldnvseeqyqqisdyfvplvnkpklksrdaigqafvmatevcpdanpsdlwhhvlyriyirekigtdpsQswVRtsgeafevalverynpvlarhgirltalfKgqkglaltrmgvadrvgsrkvdvmiekqgggrspdaegfgvvggihakvSlAERvsddipasrimmgegllsvlstldvKsFPpphgdlvnrgElgtpdrpsdKrnyieghgdfsacfsynlrtspsnattpsgrhiyvsgfsgqddeftdylvaqla/mrldldfgrglvahvmldnvseeqyqqisdyfvplvnkpklksrdaigqafvmatevcpdanpsdlwhhvlyriyirekigtdpsQswVRtsgeafevalverynpvlarhgirltalfKgqkglaltrmgvadrvgsrkvdvmiekqgggrspdaegfgvvggihakvSlAERvsddipasrimmgegllsvlstldvKsFPpphgdlvnrgElgtpdrpsdKrnyieghgdfsacfsynlrtspsnattpsgrhiyvsgfsgqddeftdylvaqla >5dy0_A:Homeodomain-like; title=CRYSTAL OF AMTR FROM CORYNEBACTERIUM GLUTAMICUM IN COMPLEX WITH DNA organism=Corynebacterium glutamicum DNA sequence DA(F1):DT(E24) DT(F2):DA(E23) DT(F3):DA(E22) DA(F4):DT(E21) DT(F5):DA(E20) DC(F6):DG(E19) DT(F7):DA(E18) DA(F8):DT(E17) DT(F9):DA(E16) DA(F10):DT(E15) DG(F11):DC(E14) DA(F12):DT(E13) DT(F13):DA(E12) DC(F14):DG(E11) DT(F15):DA(E10) DA(F16):DT(E9) DT(F17):DA(E8) DA(F18):DT(E7) DG(F19):DC(E6) DA(F20):DT(E5) DT(F21):DA(E4) DA(F22):DT(E3) DA(F23):DT(E2) DT(F24):DA(E1) chainA ( 3) VAL5 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG7 0 0 3 11 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR42 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) HIS43 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG52 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN53 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA54 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) SER55 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) TYR57 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) TYR58 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gaVgRprrsaprragknpreeildasaelfthqgfattsTHqiadavgiRQASlYYhfpskteifltllkstvepstvlaedlsildagpemrlwaivasevrlllstkwnvgrlyqlpivgseefaeyhsqrealtnifrdlateivgddpraelpfhitmsviemrrndgkipsplsadslpetaimladaslavlgaslpadrvektlelikqadak >5dy0_AB:Homeodomain-like; title=CRYSTAL OF AMTR FROM CORYNEBACTERIUM GLUTAMICUM IN COMPLEX WITH DNA organism=Corynebacterium glutamicum DNA sequence DA(F1):DT(E24) DT(F2):DA(E23) DT(F3):DA(E22) DA(F4):DT(E21) DT(F5):DA(E20) DC(F6):DG(E19) DT(F7):DA(E18) DA(F8):DT(E17) DT(F9):DA(E16) DA(F10):DT(E15) DG(F11):DC(E14) DA(F12):DT(E13) DT(F13):DA(E12) DC(F14):DG(E11) DT(F15):DA(E10) DA(F16):DT(E9) DT(F17):DA(E8) DA(F18):DT(E7) DG(F19):DC(E6) DA(F20):DT(E5) DT(F21):DA(E4) DA(F22):DT(E3) DA(F23):DT(E2) DT(F24):DA(E1) chainA ( 3) VAL5 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG7 0 0 3 11 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR42 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) HIS43 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG52 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN53 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA54 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) SER55 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) TYR57 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) TYR58 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 49) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 50) GLN53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 ( 51) ALA54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 ( 54) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 ( 55) TYR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 prot.sequence gaVgRprrsaprragknpreeildasaelfthqgfattsTHqiadavgiRQASlYYhfpskteifltllkstvepstvlaedlsildagpemrlwaivasevrlllstkwnvgrlyqlpivgseefaeyhsqrealtnifrdlateivgddpraelpfhitmsviemrrndgkipsplsadslpetaimladaslavlgaslpadrvektlelikqadak/avgrprrsaprragknpreeildasaelfthqgfattsthqiadavgiRQAslYYhfpskteifltllkstvepstvlaedlsildagpemrlwaivasevrlllstkwnvgrlyqlpivgseefaeyhsqrealtnifrdlateivgddpraelpfhitmsviemrrndgkipsplsadslpetaimladaslavlgaslpadrvektlelikqada >5dy0_CD:Homeodomain-like; title=CRYSTAL OF AMTR FROM CORYNEBACTERIUM GLUTAMICUM IN COMPLEX WITH DNA organism=Corynebacterium glutamicum DNA sequence DA(G1):DT(H24) DT(G2):DA(H23) DT(G3):DA(H22) DA(G4):DT(H21) DT(G5):DA(H20) DC(G6):DG(H19) DT(G7):DA(H18) DA(G8):DT(H17) DT(G9):DA(H16) DA(G10):DT(H15) DG(G11):DC(H14) DA(G12):DT(H13) DT(G13):DA(H12) DC(G14):DG(H11) DT(G15):DA(H10) DA(G16):DT(H9) DT(G17):DA(H8) DA(G18):DT(H7) DG(G19):DC(H6) DA(G20):DT(H5) DT(G21):DA(H4) DA(G22):DT(H3) DA(G23):DT(H2) DT(G24):DA(H1) chainC ( 3) ARG7 0 0 5 13 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG52 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLN53 0 0 0 0 0 0 0 0 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ALA54 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) SER55 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) TYR57 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) TYR58 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) VAL5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 ( 4) ARG7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 11 3 0 0 ( 39) THR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 40) HIS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 49) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 50) GLN53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 ( 51) ALA54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 ( 52) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 54) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 ( 55) TYR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 prot.sequence vgRprrsaprragknpreeildasaelfthqgfattsthqiadavgiRQASlYYhfpskteifltllkstvepstvlaedlsildagpemrlwaivasevrlllstkwnvgrlyqlpivgseefaeyhsqrealtnifrdlateivgddpraelpfhitmsviemrrndgkipsplsadslpetaimladaslavlgaslpadrvektlelikqadak/aVgRprrsaprragknpreeildasaelfthqgfattsTHqiadavgiRQASlYYhfpskteifltllkstvepstvlaedlsildagpemrlwaivasevrlllstkwnvgrlyqlpivgseefaeyhsqrealtnifrdlateivgddpraelpfhitmsviemrrndgkipsplsadslpetaimladaslavlgaslpadrvektlelikqadak >5e01_AB:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HINMLR, A MERR FAMILY REGULATOR LACKING THE SENSOR DOMAIN, BOUND TO PALYNDROMIC PROMOTER DNA organism=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) / Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) / Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) / Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) DNA sequence DC(D1):DG(C18) DT(D2):DA(C17) DT(D3):DA(C16) DA(D4):DT(C15) DG(D5):DC(C14) DA(D6):DT(C13) DG(D7):DC(C12) DT(D8):DA(C11) DG(D9):DC(C10) DC(D10):DG(C9) DA(D11):DT(C8) DC(D12):DG(C7) DT(D13):DA(C6) DC(D14):DG(C5) DT(D15):DA(C4) DA(D16):DT(C3) DA(D17):DT(C2) DG(D18):DC(C1) chainA ( 17) TYR17 0 0 0 3 13 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG20 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) PHE21 0 0 0 0 0 4 12 1 0 0 0 0 0 0 0 0 0 0 ( 24) LYS24 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 18) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 2 14 3 0 0 0 ( 21) ARG20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 ( 22) PHE21 0 0 0 0 0 0 0 0 0 0 1 10 3 0 0 0 0 0 ( 25) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 prot.sequence mtyttakaaekigisaYtlRFydKegllpnvgrdeygnrrftdkdlqwlsllqclkntgmslkdikrfaectiigddtieerlslfenqtknvkcqiaelkryldlleyklafyqkakalgsvkav/amtyttakaaekigisaYtlRFydKegllpnvgrdeygnrrftdkdlqwlsllqclkntgmslkdikrfaectiigddtieerlslfenqtknvkcqiaelkryldlleyklafyqkakalgsvkav >5e01_B:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HINMLR, A MERR FAMILY REGULATOR LACKING THE SENSOR DOMAIN, BOUND TO PALYNDROMIC PROMOTER DNA organism=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) / Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) DNA sequence DC(D1):DG(C18) DT(D2):DA(C17) DT(D3):DA(C16) DA(D4):DT(C15) DG(D5):DC(C14) DA(D6):DT(C13) DG(D7):DC(C12) DT(D8):DA(C11) DG(D9):DC(C10) DC(D10):DG(C9) DA(D11):DT(C8) DC(D12):DG(C7) DT(D13):DA(C6) DC(D14):DG(C5) DT(D15):DA(C4) DA(D16):DT(C3) DA(D17):DT(C2) DG(D18):DC(C1) chainB ( 18) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 2 14 3 0 0 0 ( 21) ARG20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 ( 22) PHE21 0 0 0 0 0 0 0 0 0 0 1 10 3 0 0 0 0 0 ( 25) LYS24 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 prot.sequence amtyttakaaekigisaYtlRFydKegllpnvgrdeygnrrftdkdlqwlsllqclkntgmslkdikrfaectiigddtieerlslfenqtknvkcqiaelkryldlleyklafyqkakalgsvkav >5e17_CDF: title=T. THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX HAVING A RRR DISCRIMINATOR SEQUENCE AND A NONTEMPLATE-STRAND LENGTH CORRESPONDING TO TSS SELECTION AT POSITION 7 (RPO-GGG-7) organism=? DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) chainC (415) GLU421 9 0 0 0 0 0 0 0 0 0 (416) ARG422 30 0 0 0 0 0 0 0 0 0 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvaPGdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >5e18_CDF: title=T. THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX HAVING A YYY DISCRIMINATOR SEQUENCE AND A NONTEMPLATE-STRAND LENGTH CORRESPONDING TO TSS SELECTION AT POSITION 8 (RPO-CCC-8) organism=? DNA sequence DG(G4):DC(H25) DC(G5):DG(H24) DA(G6):DT(H23) DT(G7):DA(H22) DC(G8):DG(H21) DC(G9):DG(H20) DG(G10):DC(H19) DT(G11):DA(H18) DG(G12):DC(H17) DA(G13):DT(H16) chainC (415) GLU421 0 0 0 0 0 0 0 0 0 2 (416) ARG422 0 0 0 0 0 0 0 0 0 32 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvaPGdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvslegdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >5e24_E:DNA-binding_protein_LAG-1_CSL;p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF THE SU(H)-HAIRLESS-DNA REPRESSOR COMPLEX organism=DROSOPHILA MELANOGASTER DNA sequence DT(G3):DA(H15) DC(G4):DG(H14) DT(G5):DA(H13) DT(G6):DA(H12) DT(G7):DA(H11) DC(G8):DG(H10) DC(G9):DG(H9) DC(G10):DG(H8) DA(G11):DT(H7) DC(G12):DG(H6) DA(G13):DT(H5) DG(G14):DC(H4) DT(G15):DA(H3) chainE ( 36) TYR134 0 0 0 0 10 3 0 0 0 0 0 0 0 ( 39) GLU137 0 0 0 0 0 0 1 1 3 0 0 0 0 ( 41) ARG139 0 0 0 0 0 0 0 9 10 0 0 0 0 (141) SER239 0 0 0 0 2 0 0 0 0 0 0 0 0 (142) LYS240 0 0 0 0 4 9 6 0 0 0 0 0 0 (170) ARG268 0 0 0 0 0 0 0 0 5 9 0 0 0 (171) SER269 0 0 0 0 0 0 0 0 0 1 5 0 0 prot.sequence hieekkltrdamekymrerndmvivilhakvaqksYgnEkRffcpppciylfgsgwtrryeemlqqgegeqgaqlcafigigssdqdmqqldlngkqycaaktlfisdsdkrkhfmlsvkmfygnghdigvfnskrikviSKpskkkqslknadlciasgtnvalfnrlRSqtvstrylhvegghfhasstqwgaftihllddneseseefqvrdgyihygatvklvcsvtgmalprliirkvdkqmalleaddpvsqlhkcafymkdtdrmylclsqekiiqfqatpcpkepnkemindgacwtiistdkaeyqfyegmgpvaspvtpvpivnslnlngggdvamlelsgdnftphlqvwfgdveaetmyrctetllcvvpeisqfrgewlwvrqptqvpislvrndgiiyatgltftytpep >5e3l_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F1-8G (AAATTGGTTTGAATTTTGAGCCAATTT) organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DG(D6):DC(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DA(D11):DT(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DC(D17):DG(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DC(D22):DG(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 77) ASN84 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 6 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRkklkkygmn >5e3l_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F1-8G (AAATTGGTTTGAATTTTGAGCCAATTT) organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DG(D6):DC(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DA(D11):DT(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DC(D17):DG(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DC(D22):DG(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 77) ASN84 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 6 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 7 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlRkklkkygmn >5e3m_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F35 (AAATTAGTTTGAATCTCGAGCTAATTT) organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DA(C6):DT(D22) DG(C7):DC(D21) DT(C8):DA(D20) DT(C9):DA(D19) DT(C10):DA(D18) DG(C11):DC(D17) DA(C12):DT(D16) DA(C13):DT(D15) DT(C14):DA(D14) DC(C15):DG(D13) DT(C16):DA(D12) DC(C17):DG(D11) DG(C18):DC(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DT(C22):DA(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 7 0 0 0 0 0 ( 83) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlrKklkkygmn >5e3m_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F35 (AAATTAGTTTGAATCTCGAGCTAATTT) organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DA(D6):DT(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DC(D10):DG(C18) DG(D11):DC(C17) DA(D12):DT(C16) DG(D13):DC(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DC(D17):DG(C11) DA(D18):DT(C10) DA(D19):DT(C9) DA(D20):DT(C8) DC(D21):DG(C7) DT(D22):DA(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 77) ASN84 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 7 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS90 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 6 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlrKklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlRkklkkygmn >5e3n_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F31 (AAATTTGTAGGAATTTTCTGCAAATTT) organism=Escherichia coli DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DA(C3):DT(D25) DT(C4):DA(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DA(C9):DT(D19) DG(C10):DC(D18) DG(C11):DC(D17) DA(C12):DT(D16) DA(C13):DT(D15) DT(C14):DA(D14) DT(C15):DA(D13) DT(C16):DA(D12) DT(C17):DA(D11) DC(C18):DG(D10) DT(C19):DA(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DA(C23):DT(D5) DA(C24):DT(D4) DT(C25):DA(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 68) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 13 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn >5e3n_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F31 (AAATTTGTAGGAATTTTCTGCAAATTT) organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DA(D9):DT(C19) DG(D10):DC(C18) DA(D11):DT(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DC(D17):DG(C11) DC(D18):DG(C10) DT(D19):DA(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 13 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 14 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >5e3o_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F32 (AAATTTGGAGGAATTTTCTCCAAATTT) organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DG(D8):DC(C20) DA(D9):DT(C19) DG(D10):DC(C18) DA(D11):DT(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DC(D17):DG(C11) DC(D18):DG(C10) DT(D19):DA(C9) DC(D20):DG(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 68) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ASN84 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG85 0 0 0 0 0 14 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG89 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 75) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 13 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 prot.sequence sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn/mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >5e3o_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F32 (AAATTTGGAGGAATTTTCTCCAAATTT) organism=Escherichia coli DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DA(D3):DT(C25) DT(D4):DA(C24) DT(D5):DA(C23) DT(D6):DA(C22) DG(D7):DC(C21) DG(D8):DC(C20) DA(D9):DT(C19) DG(D10):DC(C18) DA(D11):DT(C17) DA(D12):DT(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DT(D16):DA(C12) DC(D17):DG(C11) DC(D18):DG(C10) DT(D19):DA(C9) DC(D20):DG(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DT(D25):DA(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainB ( 75) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 13 0 0 0 0 0 ( 89) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 prot.sequence mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn >5e41_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH 5-(N-(10- HYDROXYDECANOYL)-AMINOPENTENYL)-2'-DEOXYURIDINE-TRIPHOSPHATE organism=Thermus aquaticus DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (248) LYS540 0 1 5 4 0 0 0 0 0 0 0 (281) ARG573 4 0 0 0 0 0 0 0 0 0 0 (288) ASN580 0 1 0 0 0 0 0 0 0 0 0 (291) ASN583 1 11 1 0 0 0 0 0 0 0 0 (462) GLN754 1 0 0 0 0 0 0 0 0 0 0 (492) HIS784 1 0 0 0 0 0 0 0 0 0 0 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >5e5a_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE CHROMATIN-TETHERING DOMAIN OF HUMAN CYTOMEGALOVIRUS IE1 PROTEIN BOUND TO THE NUCLEOSOME CORE PARTICLE organism=XENOPUS LAEVIS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/kkRrktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5e5a_E:Histone-fold; title=CRYSTAL STRUCTURE OF THE CHROMATIN-TETHERING DOMAIN OF HUMAN CYTOMEGALOVIRUS IE1 PROTEIN BOUND TO THE NUCLEOSOME CORE PARTICLE organism=XENOPUS LAEVIS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >5e5o_A:Homing_endonucleases; title=I-SMAMI BOUND TO UNCLEAVED DNA TARGET IN THE PRESENCE OF CALCIUM IONS organism=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) / Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) DNA sequence DG(C1):DC(B25) DG(C2):DC(B24) DT(C3):DA(B23) DA(C4):DT(B22) DT(C5):DA(B21) DC(C6):DG(B20) DC(C7):DG(B19) DT(C8):DA(B18) DC(C9):DG(B17) DC(C10):DG(B16) DA(C11):DT(B15) DT(C12):DA(B14) DT(C13):DA(B13) DA(C14):DT(B12) DT(C15):DA(B11) DC(C16):DG(B10) DA(C17):DT(B9) DG(C18):DC(B8) DG(C19):DC(B7) DT(C20):DA(B6) DG(C21):DC(B5) DT(C22):DA(B4) DA(C23):DT(B3) DC(C24):DG(B2) DG(C25):DC(B1) chainA ( 16) SER22 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) MET24 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG26 0 0 0 0 0 0 8 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG28 0 0 0 0 0 10 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS32 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) TYR33 0 0 24 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU38 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) VAL40 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR46 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) LYS69 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER71 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG79 0 0 0 0 0 0 0 2 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLU81 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) LYS183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 (179) ILE185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 (181) LYS187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 11 6 0 0 0 (183) SER189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (185) SER191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 (186) ILE192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 (191) GLN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 (197) GLN203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (199) THR205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 (221) GLU227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 (223) ASP229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 (225) ARG231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 23 0 0 0 0 0 0 0 0 (228) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 (230) TYR236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 (234) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 prot.sequence klnpwavvgfidaegSfMvRvRknsKYktgwLvVaifSvTvdkkdlflleslktffgglgsiKkSgnstfSyRiEsseqltkiilpffdkysliteklgdyllfkkvlelmgtkehltqrglekivslkasinkglseelqaafpqcvptprpeinnknipdpfwlagfvsgdgsfKsIlKkSeSIkvgfQsilvfQiTqhardvklmeslisylgcgfiEkDsRgpWlYytvTnfsdiqgkiipffhqykiigskygdymdwckialimqnknhltpeglneiralkggmnkg >5e5s_A:Homing_endonucleases; title=I-SMAMI K103A MUTANT organism=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) / Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) DNA sequence DG(C1):DC(B25) DG(C2):DC(B24) DT(C3):DA(B23) DA(C4):DT(B22) DT(C5):DA(B21) DC(C6):DG(B20) DC(C7):DG(B19) DT(C8):DA(B18) DC(C9):DG(B17) DC(C10):DG(B16) DA(C11):DT(B15) DT(C12):DA(B14) DT(C13):DA(B13) DA(C14):DT(B12) DT(C15):DA(B11) DC(D16):DG(B10) DA(D17):DT(B9) DG(D18):DC(B8) DG(D19):DC(B7) DT(D20):DA(B6) DG(D21):DC(B5) DT(D22):DA(B4) DA(D23):DT(B3) DC(D24):DG(B2) DG(D25):DC(B1) chainA ( 19) SER22 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) MET24 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG26 0 0 0 0 0 0 13 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG28 0 0 0 0 0 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS32 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) TYR33 0 0 23 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LEU38 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) VAL40 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR46 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) LYS69 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) SER71 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR75 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG79 0 0 0 0 0 0 0 2 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) GLU81 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) LYS183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 (182) ILE185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 (184) LYS187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 11 6 0 0 0 (186) SER189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (188) SER191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 (189) ILE192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 (194) GLN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 13 0 0 (200) GLN203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (202) THR205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 (224) GLU227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 (226) ASP229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (227) SER230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (228) ARG231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 30 0 0 0 0 0 0 0 0 (231) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 (233) TYR236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 3 0 0 0 0 0 0 0 0 (237) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 prot.sequence ensklnpwavvgfidaegSfMvRvRknsKYktgwLvVaifsvTvdkkdlflleslktffgglgsiKkSgnsTfsyRiEsseqltkiilpffdkyslitealgdyllfkkvlelmgtkehltqrglekivslkasinkglseelqaafpqcvptprpeinnknipdpfwlagfvsgdgsfKsIlKkSeSIkvgfQsilvfQiTqhardvklmeslisylgcgfiEkDSRgpWlYytvTnfsdiqgkiipffhqykiigskygdyqdwckialimqnknhltpeglneiralkggmnkg >5e63_A:Homing_endonucleases; title=K262A MUTANT OF I-SMAMI organism=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) / Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) DNA sequence DG(D1):DC(C25) DG(D2):DC(C24) DT(D3):DA(C23) DA(D4):DT(C22) DT(D5):DA(C21) DC(D6):DG(C20) DC(D7):DG(C19) DT(D8):DA(C18) DC(D9):DG(C17) DC(D10):DG(C16) DA(D11):DT(C15) DT(D12):DA(B14) DT(D13):DA(B13) DA(D14):DT(B12) DT(D15):DA(B11) DC(E16):DG(B10) DA(E17):DT(B9) DG(E18):DC(B8) DG(E19):DC(B7) DT(E20):DA(B6) DG(E21):DC(B5) DT(E22):DA(B4) DA(E23):DT(B3) DC(E24):DG(B2) DG(E25):DC(B1) chainA ( 15) SER22 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) MET24 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG26 0 0 0 0 0 0 13 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG28 0 0 0 0 1 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS32 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) TYR33 0 0 22 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) LEU38 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) VAL40 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR46 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) LYS69 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER71 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR75 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG79 0 0 0 0 0 0 0 2 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLU81 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) LYS183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 (178) ILE185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 (180) LYS187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 7 0 0 0 (182) SER189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (184) SER191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 (185) ILE192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 (190) GLN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 15 0 0 (196) GLN203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (198) THR205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 (220) GLU227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 (222) ASP229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 (224) ARG231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 31 0 0 0 0 0 0 0 0 (227) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 (229) TYR236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 (233) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 prot.sequence lnpwavvgfidaegSfMvRvRknsKYktgwLvVaifsvTvdkkdlflleslktffgglgsiKkSgnsTfsyRiEsseqltkiilpffdkysliteklgdyllfkkvlelmgtkehltqrglekivslkasinkglseelqaafpqcvptprpeinnknipdpfwlagfvsgdgsfKsIlKkSeSIkvgfQsilvfQiTqhardvklmeslisylgcgfiEkDsRgpWlYytvTnfsdiqgkiipffhqykiigsaygdyqdwckialimqnknhltpeglneiralkggmnkg >5e67_A:Homing_endonucleases; title=K103A/K262A DOUBLE MUTANT OF I-SMAMI organism=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) / Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) DNA sequence DC(B1):DG(C25) DG(B2):DC(C24) DT(B3):DA(C23) DA(B4):DT(C22) DC(B5):DG(C21) DA(B6):DT(C20) DC(B7):DG(C19) DC(B8):DG(C18) DT(B9):DA(C17) DG(B10):DC(C16) DA(B11):DT(C15) DT(B12):DA(C14) DA(B13):DT(C13) DA(B14):DT(C12) DT(B15):DA(C11) DG(B16):DC(C10) DG(B17):DC(C9) DA(B18):DT(C8) DG(B19):DC(C7) DG(B20):DC(C6) DA(B21):DT(C5) DT(B22):DA(C4) DA(B23):DT(C3) DC(B24):DG(C2) DC(B25):DG(C1) chainA ( 16) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 18) MET24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 ( 20) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 11 0 0 0 0 0 0 ( 22) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 12 0 0 0 0 0 ( 26) LYS32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 27) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 15 0 0 ( 32) LEU38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 34) VAL40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 40) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 63) LYS69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 65) SER71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 69) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 2 0 0 0 0 0 0 0 ( 75) GLU81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 (177) LYS183 0 0 0 0 0 0 1 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ILE185 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) LYS187 0 0 0 5 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) SER191 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ILE192 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) GLN197 0 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) ILE199 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) GLN203 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) THR205 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) GLU227 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) ASP229 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ARG231 0 0 0 0 0 0 0 0 26 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) TRP234 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) TYR236 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) THR240 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klnpwavvgfidaegSfMvRvRknsKYktgwLvVaifSvTvdkkdlflleslktffgglgsiKkSgnsTfSyRiEsseqltkiilpffdkyslitealgdyllfkkvlelmgtkehltqrglekivslkasinkglseelqaafpqcvptprpeinnknipdpfwlagfvsgdgsfKsIlKkseSIkvgfQsIlvfQiTqhardvklmeslisylgcgfiEkDsRgpWlYytvTnfsdiqgkiipffhqykiigsaygdyqdwckialimqnknhltpeglneiralkggmnkg >5e69_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - IL8 NF-KB RESPONSE ELEMENT COMPLEX organism=Homo sapiens DNA sequence DA(D34):DT(C33) DT(D35):DA(C32) DC(D36):DG(C31) DG(D37):DC(C30) DT(D38):DA(C29) DG(D39):DC(C28) DG(D40):DC(C27) DA(D41):DT(C26) DA(D42):DT(C25) DT(D43):DA(C24) DT(D44):DA(C23) DT(D45):DA(C22) DC(D46):DG(C21) DC(D47):DG(C20) DT(D48):DA(C19) DC(D49):DG(C18) chainA ( 25) LYS442 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 ( 26) VAL443 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 30) ARG447 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 prot.sequence pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >5e69_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - IL8 NF-KB RESPONSE ELEMENT COMPLEX organism=Homo sapiens DNA sequence DA(D34):DT(C33) DT(D35):DA(C32) DC(D36):DG(C31) DG(D37):DC(C30) DT(D38):DA(C29) DG(D39):DC(C28) DG(D40):DC(C27) DA(D41):DT(C26) DA(D42):DT(C25) DT(D43):DA(C24) DT(D44):DA(C23) DT(D45):DA(C22) DC(D46):DG(C21) DC(D47):DG(C20) DT(D48):DA(C19) DC(D49):DG(C18) chainA ( 25) LYS442 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 ( 26) VAL443 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 30) ARG447 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 chainB ( 26) VAL443 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG447 0 0 12 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea/pklclvcsdeasgchygvltcgsckVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >5e6a_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - PLAU NF-KB RESPONSE ELEMENT COMPLEX organism=Homo sapiens DNA sequence DA(D1):DT(C16) DT(D2):DA(C15) DC(D3):DG(C14) DA(D4):DT(C13) DG(D5):DC(C12) DG(D6):DC(C11) DA(D7):DT(C10) DA(D8):DT(C9) DA(D9):DT(C8) DT(D10):DA(C7) DT(D11):DA(C6) DC(D12):DG(C5) DC(D13):DG(C4) DC(D14):DG(C3) DA(D15):DT(C2) DG(D16):DC(C1) chainA ( 25) LYS442 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 ( 26) VAL443 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 ( 30) ARG447 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 chainB ( 30) ARG447 0 2 13 11 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea/pklclvcsdeasgchygvltcgsckvffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >5e6a_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - PLAU NF-KB RESPONSE ELEMENT COMPLEX organism=Homo sapiens DNA sequence DC(C1):DG(D16) DT(C2):DA(D15) DG(C3):DC(D14) DG(C4):DC(D13) DG(C5):DC(D12) DA(C6):DT(D11) DA(C7):DT(D10) DT(C8):DA(D9) DT(C9):DA(D8) DT(C10):DA(D7) DC(C11):DG(D6) DC(C12):DG(D5) DT(C13):DA(D4) DG(C14):DC(D3) DA(C15):DT(D2) DT(C16):DA(D1) chainB ( 30) ARG447 0 0 0 0 0 0 0 0 0 0 0 0 11 13 2 0 prot.sequence pklclvcsdeasgchygvltcgsckvffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >5e6b_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - RELB NF-KB RESPONSE ELEMENT COMPLEX organism=Homo sapiens DNA sequence DC(D1):DG(C16) DC(D2):DG(C15) DG(D3):DC(C14) DG(D4):DC(C13) DG(D5):DC(C12) DG(D6):DC(C11) DA(D7):DT(C10) DA(D8):DT(C9) DT(D9):DA(C8) DT(D10):DA(C7) DC(D11):DG(C6) DC(D12):DG(C5) DG(D13):DC(C4) DC(D14):DG(C3) DC(D15):DG(C2) DG(D16):DC(C1) chainA ( 26) LYS442 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 ( 27) VAL443 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 ( 31) ARG447 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 prot.sequence ppklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >5e6b_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - RELB NF-KB RESPONSE ELEMENT COMPLEX organism=Homo sapiens DNA sequence DC(D1):DG(C16) DC(D2):DG(C15) DG(D3):DC(C14) DG(D4):DC(C13) DG(D5):DC(C12) DG(D6):DC(C11) DA(D7):DT(C10) DA(D8):DT(C9) DT(D9):DA(C8) DT(D10):DA(C7) DC(D11):DG(C6) DC(D12):DG(C5) DG(D13):DC(C4) DC(D14):DG(C3) DC(D15):DG(C2) DG(D16):DC(C1) chainA ( 26) LYS442 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 ( 27) VAL443 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 ( 31) ARG447 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 chainB ( 30) ARG447 1 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ppklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea/pklclvcsdeasgchygvltcgsckvffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >5e6c_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - CCL2 NF-KB RESPONSE ELEMENT COMPLEX organism=Homo sapiens DNA sequence DA(C1):DT(D16) DG(C2):DC(D15) DT(C3):DA(D14) DG(C4):DC(D13) DG(C5):DC(D12) DA(C6):DT(D11) DA(C7):DT(D10) DA(C8):DT(D9) DT(C9):DA(D8) DT(C10):DA(D7) DC(C11):DG(D6) DC(C12):DG(D5) DC(C13):DG(D4) DA(C14):DT(D3) DC(C15):DG(D2) DT(C16):DA(D1) chainA ( 25) LYS442 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 30) ARG447 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 ( 74) ARG491 0 0 4 10 1 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleaRktkk/klclvcsdeasgchygvltcgsckVFfkrAvegqhnylcagrndciidkirrkncpacryrkclqagmnlea >5e6d_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - ICAM1 NF-KB RESPONSE ELEMENT COMPLEX organism=Homo sapiens DNA sequence DG(C1) DC(C2) DT(C3) DC(C4) DC(C5) DG(C6) DG(C7) DA(C8) DA(C9) DT(C10) DT(C11) DT(C12) DC(C13) DC(C14) DA(C15) DA(C16) chainB ( 25) VAL443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence klclvcsdeasgchygvltcgsckVffkravegqhnylcagrndciidkirrkncpacryrkclqagmnlea >5e8i_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF HUMAN TRANSCRIPTION FACTOR FLI1 IN COMPLEX WITH A 10-MER DNA ACCGGAAGTG organism=Homo sapiens DNA sequence DC(C14):DG(B11) DA(C15):DT(B10) DC(C16):DG(B9) DT(C17):DA(B8) DT(C18):DA(B7) DC(C19):DG(B6) DC(C20):DG(B5) DG(C21):DC(B4) DG(C22):DC(B3) DT(C23):DA(B2) chainA ( 55) ASP333 0 0 0 0 0 0 5 0 0 0 ( 56) LYS334 0 0 0 0 3 0 0 0 0 0 ( 59) ARG337 0 0 0 0 5 15 23 0 0 0 ( 60) ALA338 0 0 0 1 0 0 0 0 0 0 ( 62) ARG340 0 0 0 0 0 0 9 14 3 0 ( 63) TYR341 0 0 10 7 4 0 0 0 0 0 prot.sequence gqiqlwqfllellsdsanascitwegtngefkmtdpdevarrwgerkskpnmnyDKlsRAlRYyydknimtkvhgkryaykfdfhgiaqalqp >5ean_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DNA2 IN COMPLEX WITH A 5' OVERHANG DNA organism=Mus musculus DNA sequence DG(B14) DG(B13) DA(B12) DG(B11) DA(B10) DA(B9) DC(B8) DC(B7) DG(B6) DT(B5) DA(B1) DC(B2) DT(B3) DC(B4):DT(B5) chainA (126) THR129 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (154) MET157 0 15 18 0 0 0 0 0 0 0 0 0 0 0 (158) THR161 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (393) SER398 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) ASP457 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (513) ARG518 0 0 0 0 0 0 0 10 0 0 0 0 0 0 (563) ARG568 0 0 0 0 0 0 0 0 1 11 0 0 0 36 (673) TYR678 0 0 0 0 0 0 0 0 5 10 0 0 0 10 (700) LYS705 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (740) MET745 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (790) LEU795 0 0 0 0 0 0 0 0 0 0 0 0 4 5 (792) VAL797 0 0 0 0 0 0 0 0 0 0 0 0 5 3 (990) LEU995 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (996) ARG1001 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence gghmepldeldlllleavprvellrkkadalfpetvlsrgvdnrylvlavetsqnergaeekrlhvtasqdrehevlcilrngwssvpvepgdivhlegdctsepwiidddfgyfilypdmmisgTsvassirclrravlsetfrgsdpatrqMligTilhevfqkaisesfaperlqelalqtlrevrhlkemyrlnlsqdeilceveeylpsfskwaedfmrkgpssefpqmqlslpsdgrsspcnievvksldieesiwsprfglkgkidvtvgvkihrdckmkykvmplelktgkesnsiehrsqvvlytllsqerredpeagwllylktgqmypvpanhldkrellklrnwlaasllhrvsraapgeearlsalpqiieeektckYcSqigncalysraveeqgddasipeamlskiqeetrhlqlahlkyfslwclmltlesqskDnrkthqsiwltpaseleesgncvgnlvrtepvsrvcdgqylhnfqrkngpmpatnlmagdRiilsgeerklfalskgyvkkmnkaavtclldrnlstlpattvfrldreeRhgdistplgnlsklmestdpskrlreliidfrepqfiaylssvlphdakdtvanilkglnkpqrqamkrvllskdytlivgmpgtgkttticalvrilsacgfsvlltsYthsavdnillklakfkvgflrlgqshKvhpdiqkfteeeicrsrsiaslahleelynshpivattcMginhpifsrktfdfcivdeasqisqpvclgplffsrrfvlvgdhqqlppLvVnrearalgmseslfkrlernesavvqltvqyrmnrkimslsnkltyagklecgsdrvanavlalpnlkdarlslqlyadysdspwlagvlepdnpvcflntdkvpapeqvenggvsnvtearlivfltstfikagcspsdigviapyrqqlriisdllarssvgmvevntvdkyqgrdkslilvsfvrsnedgtlgeLlkdwrRlnvaltrakhklillgsvsslkrfpplgtlfdhlnaeqlildlpsreheslshil >5eax_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DNA2 IN COMPLEX WITH AN SSDNA organism=Mus musculus DNA sequence DT(E16) DT(E15) DT(E14) DT(E13) DT(E12) DT(E11) DT(E10) DT(E9) DT(E8) DT(E7) DT(E6) DT(E1) DT(E2) DT(E3) DT(E4) DT(E5):DT(E6) chainA (123) THR129 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (142) ARG148 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 0 (151) MET157 0 10 20 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR161 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) ASP457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (484) ASP494 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (486) GLN496 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (508) ARG518 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (523) LYS533 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (539) ASP549 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (556) GLU566 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (557) GLU567 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 (558) ARG568 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 10 (561) ASP571 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (563) SER573 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (668) TYR678 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 11 (735) MET745 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (785) LEU795 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 (787) VAL797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 (985) LEU995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (991) ARG1001 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 prot.sequence mepldeldlllleavprvellrkkadalfpetvlsrgvdnrylvlavetsqnergaeekrlhvtasqdrehevlcilrngwssvpvepgdivhlegdctsepwiidddfgyfilypdmmisgTsvassirclrravlsetfRgsdpatrqMligTilhevfqkaisesfaperlqelalqtlrevrhlkemyrlnlsqdeilceveeylpsfskwaedfmrkgpssefpqmqlslpsdgrsspcnievvksldieesiwsprfglkgkiavtvgvkihrdckmkykvmplelktgkesnsiehrsqvvlytllsqerredpeagwllylktgqmypvpanhldkrellklrnwlaasllhrvsraapgeearlsalpqiieeektckYcsqigncalysraveeddasipeamlskiqeetrhlqlahlkyfslwclmltlesqskDnrkthqsiwltpaseleesgncvgnlvrtepvsrvcDgQylhnfqrkngpmpatnlmagdRiilsgeerklfalsKgyvkkmnkaavtcllDrnlstlpattvfrldrEERhgDiStplgnlsklmestdpskrlreliidfrepqfiaylssvlphdakdtvanilkglnkpqrqamkrvllskdytlivgmpgtgkttticalvrilsacgfsvlltsYthsavdnillklakfkvgflrlgqshkvhpdiqkfteeeicrsrsiaslahleelynshpivattcMginhpifsrktfdfcivdeasqisqpvclgplffsrrfvlvgdhqqlppLvVnrearalgmseslfkrlernesavvqltvqyrmnrkimslsnkltyagklecgsdrvanavlalpnlkdarlslqlyadysdspwlagvlepdnpvcflntdkvpapeqvenggvsnvtearlivfltstfikagcspsdigviapyrqqlriisdllarssvgmvevntvdkyqgrdkslilvsfvrsnedgtlgeLlkdwrRlnvaltrakhklillgsvsslkrfpplgtlfdhlnaeqlildlpsreheslshil >5ed4_A:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=STRUCTURE OF A PHOP-DNA COMPLEX organism=Mycobacterium tuberculosis DNA sequence DT(D2):DA(C26) DA(D3):DT(C25) DG(D4):DC(C24) DA(D5):DT(C23) DT(D6):DA(C22) DG(D7):DC(C21) DC(D8):DG(C20) DT(D9):DA(C19) DG(D10):DC(C18) DT(D11):DA(C17) DG(D12):DC(C16) DA(D13):DT(C15) DA(D14):DT(C14) DT(D15):DA(C13) DC(D16):DG(C12) DA(D17):DT(C11) DG(D18):DC(C10) DC(D19):DG(C9) DT(D20):DA(C8) DG(D21):DC(C7) DT(D22):DA(C6) DG(D23):DC(C5) DA(D24):DT(C4) DA(D25):DT(C3) DT(D26):DA(C2) chainA (187) ASN212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 7 1 0 0 0 0 (188) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (190) GLU215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 1 0 0 0 0 0 0 (191) SER216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 0 (192) TYR217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 (194) SER219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (195) TYR220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 (212) ARG237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 prot.sequence tpearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltardslqdkiagltlggddyvtkpfsleevvarlrvilrragvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNVvESYvSYlrrkidtgekrllhtlRgvgyvlrepr >5ed4_AB:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=STRUCTURE OF A PHOP-DNA COMPLEX organism=Mycobacterium tuberculosis DNA sequence DA(C2):DT(D26) DT(C3):DA(D25) DT(C4):DA(D24) DC(C5):DG(D23) DA(C6):DT(D22) DC(C7):DG(D21) DA(C8):DT(D20) DG(C9):DC(D19) DC(C10):DG(D18) DT(C11):DA(D17) DG(C12):DC(D16) DA(C13):DT(D15) DT(C14):DA(D14) DT(C15):DA(D13) DC(C16):DG(D12) DA(C17):DT(D11) DC(C18):DG(D10) DA(C19):DT(D9) DG(C20):DC(D8) DC(C21):DG(D7) DA(C22):DT(D6) DT(C23):DA(D5) DC(C24):DG(D4) DT(C25):DA(D3) DA(C26):DT(D2) chainA (187) ASN212 0 0 0 0 1 7 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) VAL213 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) GLU215 0 0 0 0 0 0 1 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) SER216 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) TYR217 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) SER219 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) TYR220 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) ARG237 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (182) ASN212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 8 3 0 0 0 0 0 0 (185) GLU215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 (186) SER216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 (187) TYR217 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (189) SER219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (190) TYR220 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 (207) ARG237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 prot.sequence tpearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltardslqdkiagltlggddyvtkpfsleevvarlrvilrragvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNVvESYvSYlrrkidtgekrllhtlRgvgyvlrepr/tpearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltarkiagltlggddyvtkpfsleevvarlrvilrragvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNvvESYvSYlrrkidtgekrllhtlRgvgyvlrepr >5ed4_EF:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=STRUCTURE OF A PHOP-DNA COMPLEX organism=Mycobacterium tuberculosis DNA sequence DT(H2):DA(G26) DA(H3):DT(G25) DG(H4):DC(G24) DA(H5):DT(G23) DT(H6):DA(G22) DG(H7):DC(G21) DC(H8):DG(G20) DT(H9):DA(G19) DG(H10):DC(G18) DT(H11):DA(G17) DG(H12):DC(G16) DA(H13):DT(G15) DA(H14):DT(G14) DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DG(H18):DC(G10) DC(H19):DG(G9) DT(H20):DA(G8) DG(H21):DC(G7) DT(H22):DA(G6) DG(H23):DC(G5) DA(H24):DT(G4) DA(H25):DT(G3) DT(H26):DA(G2) chainE (189) ASN212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 7 1 0 0 0 0 (190) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (192) GLU215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 1 0 0 0 0 0 0 (193) SER216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 0 (194) TYR217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 (196) SER219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (197) TYR220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 (214) ARG237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 chainF (179) ASN212 0 0 0 0 0 0 3 8 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) GLU215 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) SER216 0 0 0 0 0 0 0 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR217 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER219 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) TYR220 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ARG237 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltardslqdkiagltlggddyvtkpfsleevvarlrvilrragrnvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNVvESYvSYlrRkidtgekrllhtlRgvgyvlrepr/pearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltaragltlggddyvtkpfsleevvarlrvilrragvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNvvESYvSYlrRkidtgekrllhtlRgvgyvlrepr >5edn_AJ:Homeodomain-like; title=STRUCTURE OF HOXB13-DNA(TCG) COMPLEX organism=Homo sapiens DNA sequence DG(F1):DC(C19) DG(F2):DC(C18) DA(F3):DT(C17) DC(F4):DG(C16) DC(F5):DG(C15) DT(F6):DA(C14) DC(F7):DG(C13) DG(F8):DC(C12) DT(F9):DA(C11) DA(F10):DT(C10) DA(F11):DT(C9) DA(F12):DT(C8) DA(F13):DT(C7) DC(F14):DG(C6) DA(F15):DT(C5) DC(F16):DG(C4) DA(F17):DT(C3) DA(F18):DT(C2) DT(K2):DG(C1) DT(K3):DA(L17) DG(K4):DC(L16) DT(K5):DA(L15) DG(K6):DC(L14) DT(K7):DA(L13) DT(K8):DA(L12) DT(K9):DA(L11) DT(K10):DA(L10) DA(K11):DT(L9) DC(K12):DG(L8) DG(K13):DC(L7) DA(K14):DT(L6) DG(K15):DC(L5) DG(K16):DC(L4) DT(K17):DA(L3) DC(K18):DG(L2) DC(K19):DG(L1) chainA ( 1) ARG217 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) LYS218 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG220 0 0 0 0 0 0 0 0 0 1 11 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ILE262 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLN265 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN266 0 0 0 0 0 0 0 1 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) VAL269 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 2) LYS218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 4) ARG220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 15 4 0 0 0 0 0 0 0 0 0 ( 46) ILE262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 49) GLN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 50) ASN266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 15 1 0 0 0 0 0 0 0 prot.sequence RKkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrVkekkvla/rKkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrvkekkvlak >5edn_BG:Homeodomain-like; title=STRUCTURE OF HOXB13-DNA(TCG) COMPLEX organism=Homo sapiens DNA sequence DG(E1):DC(D19) DG(E2):DC(D18) DA(E3):DT(D17) DC(E4):DG(D16) DC(E5):DG(D15) DT(E6):DA(D14) DC(E7):DG(D13) DG(E8):DC(D12) DT(E9):DA(D11) DA(E10):DT(D10) DA(E11):DT(D9) DA(E12):DT(D8) DA(E13):DT(D7) DC(E14):DG(D6) DA(E15):DT(D5) DC(E16):DT(D3) DA(E18):DT(D2) DG(H1):DC(I19) DT(H2):DA(I18) DT(H3):DA(I17) DG(H4):DC(I16) DT(H5):DA(I15) DG(H6):DC(I14) DT(H7):DA(I13) DT(H9):DA(I11) DT(H10):DA(I10) DA(H11):DT(I9) DC(H12):DG(I8) DG(H13):DC(I7) DA(H14):DT(I6) DG(H15):DC(I5) DG(H16):DC(I4) DT(H17):DA(I3) DC(H19):DG(I2) chainB ( 4) ARG220 0 0 0 0 0 0 0 0 0 8 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ILE262 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN266 0 0 0 0 0 0 0 2 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 3) ARG220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 ( 45) ILE262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 48) GLN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 4 0 0 ( 49) ASN266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 ( 52) VAL269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence rkkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrvkekkvlak/kkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrVkekkvlak >5edn_G:Homeodomain-like; title=STRUCTURE OF HOXB13-DNA(TCG) COMPLEX organism=Homo sapiens DNA sequence DG(I2):DC(H19) DA(I3):DT(H17) DC(I4):DG(H16) DC(I5):DG(H15) DT(I6):DA(H14) DC(I7):DG(H13) DG(I8):DC(H12) DT(I9):DA(H11) DA(I10):DT(H10) DA(I11):DT(H9) DA(I13):DT(H7) DC(I14):DG(H6) DA(I15):DT(H5) DC(I16):DG(H4) DA(I17):DT(H3) DA(I18):DT(H2) DC(I19):DG(H1) DT(D2):DA(E18) DT(D3):DC(E16) DT(D5):DA(E15) DG(D6):DC(E14) DT(D7):DA(E13) DT(D8):DA(E12) DT(D9):DA(E11) DT(D10):DA(E10) DA(D11):DT(E9) DC(D12):DG(E8) DG(D13):DC(E7) DA(D14):DT(E6) DG(D15):DC(E5) DG(D16):DC(E4) DT(D17):DA(E3) DC(D18):DG(E2) DC(D19):DG(E1) chainG ( 3) ARG220 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ILE262 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) GLN265 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ASN266 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) VAL269 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrVkekkvlak >5edw_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY STRUCTURE OF DPO4 BOUND TO G IN THE TEMPLATE BASE PAIRED WITH INCOMING DTTP organism=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) / Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) DNA sequence DG(P1):DC(T19) DG(P2):DC(T18) DG(P3):DC(T17) DG(P4):DC(T16) DG(P5):DC(T15) DA(P6):DT(T14) DA(P7):DT(T13) DG(P8):DC(T12) DG(P9):DC(T11) DA(P10):DT(T10) DT(P11):DA(T9) DT(P12):DG(T8) DC(P13):DG(T7) TTP(A404):DG(T6) chainA ( 7) ASP7 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 9) ASP9 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 10) TYR10 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 11) PHE11 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 12) TYR12 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 44) ALA44 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 45) THR45 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 48) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 51) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 11 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 76) MET76 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (105) ASP105 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (106) GLU106 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (159) LYS159 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (332) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (336) ARG336 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvAtanyearkfgvkagipiveakkilpnavylpMrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >5eea_G:Homeodomain-like; title=STRUCTURE OF HOXB13-DNA(CAA) COMPLEX organism=Homo sapiens DNA sequence DT(H1):DA(I18) DT(H2):DA(I17) DG(H3):DC(I16) DT(H4):DA(I15) DG(H5):DC(I14) DT(H6):DA(I13) DT(H7):DA(I12) DT(H8):DA(I11) DT(H9):DA(I10) DA(H10):DT(I9) DT(H11):DA(I8) DT(H12):DA(I7) DG(H13):DC(I6) DG(H14):DC(I5) DG(H15):DC(I4) DT(H16):DA(I3) DC(H17):DG(I2) DC(H18):DG(I1) chainG ( 4) ARG220 0 0 0 0 0 3 10 13 5 0 0 0 0 0 0 0 0 0 ( 42) ARG258 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 46) ILE262 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 ( 49) GLN265 0 0 0 0 0 0 0 0 0 0 2 3 10 1 0 0 0 0 ( 50) ASN266 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 prot.sequence rkkRipyskgqlrelereyaankfitkdkrrkisaatslseRqitIwfQNrrvkekkvlakvk >5ef6_G:Homeodomain-like; title=STRUCTURE OF HOXB13 COMPLEX WITH METHYLATED DNA organism=Homo sapiens DNA sequence DG(I1):DC(H18) DG(I2):DC(H17) DA(I3):DT(H16) DC(I4):DG(H15) DC(I5):DG(H14) 5CM(I7):DG(H12) DG(I8):5CM(H11) DT(I9):DA(H10) DA(I10):DT(H9) DA(I11):DT(H8) DA(I12):DT(H7) DA(I13):DT(H6) DC(I14):DG(H5) DA(I15):DT(H4) DC(I16):DG(H3) DA(I17):DT(H2) DA(I18):DT(H1) chainG ( 4) ARG220 0 0 0 0 0 0 0 0 6 7 10 2 0 0 0 0 0 ( 46) ILE262 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 ( 49) GLN265 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN266 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 ( 53) VAL269 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 57) LYS273 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence rkkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrvkekKvlakv >5eg0_A:Homeodomain-like; title=HOXB13-MEIS1 HETERODIMER BOUND TO DNA organism=? DNA sequence DG(D20):DC(E18) DT(D21):DA(E17) DT(D22):DA(E16) DG(D23):DC(E15) DA(D24):DT(E14) DC(D25):DG(E13) DA(D26):DT(E12) DG(D27):DC(E11) DT(D28):DA(E10) DT(D29):DA(E9) DT(D30):DA(E8) DT(D31):DA(E7) DA(D32):DT(E6) DC(D33):DG(E5) DG(D34):DC(E4) DA(D35):DT(E3) DG(D36):DC(E2) chainA ( 43) ASN321 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 46) ILE324 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 47) ASN325 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG328 0 0 0 0 7 14 8 0 0 0 0 0 0 0 0 0 0 ( 51) ARG329 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence apkvatnimrawlfqhlthpypseeqkkqlaqdtgltilqvnNwfINarRRivqpm >5eg0_AB:Homeodomain-like; title=HOXB13-MEIS1 HETERODIMER BOUND TO DNA organism=HOMO SAPIENS DNA sequence DG(D20):DC(E18) DT(D21):DA(E17) DT(D22):DA(E16) DG(D23):DC(E15) DA(D24):DT(E14) DC(D25):DG(E13) DA(D26):DT(E12) DG(D27):DC(E11) DT(D28):DA(E10) DT(D29):DA(E9) DT(D30):DA(E8) DT(D31):DA(E7) DA(D32):DT(E6) DC(D33):DG(E5) DG(D34):DC(E4) DA(D35):DT(E3) DG(D36):DC(E2) chainA ( 43) ASN321 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 46) ILE324 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 47) ASN325 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG328 0 0 0 0 7 14 8 0 0 0 0 0 0 0 0 0 0 ( 51) ARG329 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 1) ARG217 0 0 0 0 0 0 0 0 0 0 0 10 6 3 0 0 0 ( 4) ARG220 0 0 0 0 0 0 0 0 0 7 16 24 0 0 0 0 0 ( 46) ILE262 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 49) GLN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 ( 50) ASN266 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 ( 54) LYS270 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 prot.sequence apkvatnimrawlfqhlthpypseeqkkqlaqdtgltilqvnNwfINarRRivqpm/RkkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrvKekkvlak >5eg6_C:DNA-binding_protein_LAG-1_CSL;p53-like_transcription_factors;E_set_domains; title=CSL-RITA COMPLEX BOUND TO DNA organism=Mus musculus DNA sequence DT(B3):DA(A15) DC(B4):DG(A14) DT(B5):DA(A13) DT(B6):DA(A12) DT(B7):DA(A11) DC(B8):DG(A10) DC(B9):DG(A9) DC(B10):DG(A8) DA(B11):DT(A7) DC(B12):DG(A6) DA(B13):DT(A5) DG(B14):DC(A4) DT(B15):DA(A3) chainC ( 34) TYR86 0 0 0 0 9 1 0 0 0 0 0 0 0 ( 37) GLU89 0 0 0 0 0 0 1 2 3 0 0 0 0 ( 39) ARG91 0 0 0 0 0 0 2 11 9 0 0 0 0 (137) SER191 0 0 0 4 2 0 0 0 0 0 0 0 0 (138) LYS192 0 0 0 2 7 7 1 0 0 0 0 0 0 prot.sequence ppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskqslknadlciasgtkvalfnrltvstrylhveggnfhassqqwgafyihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkeqnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlnggdvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgviystsltftytpe >5egb_A:beta-beta-alpha_zinc_fingers; title=HUMAN PRDM9 ALLELE-A ZNF DOMAIN WITH ASSOCIATED RECOMBINATION HOTSPOT DNA SEQUENCE II organism=Homo sapiens DNA sequence DA(D2):DT(C21) DG(D3):DC(C20) DG(D4):DC(C19) DC(D5):DG(C18) DC(D6):DG(C17) DT(D7):DA(C16) DC(D8):DG(C15) DC(D9):DG(C14) DC(D10):DG(C13) DT(D11):DA(C12) DA(D12):DT(C11) DG(D13):DC(C10) DC(D14):DG(C9) DC(D15):DG(C8) DA(D16):DT(C7) DC(D17):DG(C6) DG(D18):DC(C5) DT(D19):DA(C4) DG(D20):DC(C3) DG(D21):DC(C2) chainA ( 15) ASN730 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) SER732 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS733 0 0 5 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG736 0 0 0 3 13 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ASP758 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) SER760 0 0 0 4 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) HIS761 0 0 0 0 0 9 11 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG764 0 0 0 0 0 5 1 12 5 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG767 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG785 0 0 0 0 0 0 0 2 13 18 0 0 0 0 0 0 0 0 0 0 ( 71) ASP786 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) SER788 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASN789 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 ( 99) ASN814 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (100) LYS815 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (101) SER816 0 0 0 0 0 0 0 0 0 9 9 2 0 0 0 0 0 0 0 0 (102) HIS817 0 0 0 0 0 0 0 0 0 0 0 9 12 14 0 0 0 0 0 0 (105) ARG820 0 0 0 0 0 0 0 0 0 0 0 0 2 10 16 0 0 0 0 0 prot.sequence ekpyvcrecgrgfSNkSHllRhqrthtgekpyvcrecgrgfrDkSHllRhqRthtgekpyvcrecgrgfRDkSNllshqrthtgekpyvcrecgrgfsNKSHllRhqrtht >5ego_AB:Homeodomain-like; title=HOXB13-MEIS1 HETERODIMER BOUND TO METHYLATED DNA organism=HOMO SAPIENS DNA sequence DG(D20):DC(E18) DT(D21):DA(E17) DT(D22):DA(E16) DG(D23):DC(E15) DA(D24):DT(E14) DC(D25):DG(E13) DA(D26):DT(E12) DG(D27):DC(E11) DT(D28):DA(E10) DT(D29):DA(E9) DT(D30):DA(E8) DT(D31):DA(E7) DA(D32):DT(E6) 5CM(D33):DG(E5) DG(D34):5CM(E4) DA(D35):DT(E3) DG(D36):DC(E2) DG(D37):DC(E1) chainA ( 44) ASN321 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ILE324 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 ( 48) ASN325 0 0 0 5 10 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG328 0 0 0 0 7 14 10 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG329 0 0 9 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 1) ARG217 0 0 0 0 0 0 0 0 0 0 0 7 8 1 0 0 0 0 ( 4) ARG220 0 0 0 0 0 0 0 0 0 11 10 6 0 0 0 0 0 0 ( 42) ARG258 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 46) ILE262 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 49) GLN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 ( 50) ASN266 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 ( 53) VAL269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence afpkvatnimrawlfqhlthpypseeqkkqlaqdtgltilqvnNwfINarRRivqpm/RkkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrvkekkvlakvk >5ego_B:Homeodomain-like; title=HOXB13-MEIS1 HETERODIMER BOUND TO METHYLATED DNA organism=HOMO SAPIENS DNA sequence DC(E1):DG(D37) DC(E2):DG(D36) DT(E3):DA(D35) 5CM(E4):DG(D34) DG(E5):5CM(D33) DT(E6):DA(D32) DA(E7):DT(D31) DA(E8):DT(D30) DA(E9):DT(D29) DA(E10):DT(D28) DC(E11):DG(D27) DT(E12):DA(D26) DG(E13):DC(D25) DT(E14):DA(D24) DC(E15):DG(D23) DA(E16):DT(D22) DA(E17):DT(D21) DC(E18):DG(D20) chainB ( 1) ARG217 0 0 0 0 1 8 7 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG220 0 0 0 0 0 0 6 10 11 0 0 0 0 0 0 0 0 0 ( 42) ARG258 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ILE262 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLN265 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN266 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 ( 53) VAL269 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RkkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrvkekkvlakvk >5eh2_E:beta-beta-alpha_zinc_fingers; title=HUMAN PRDM9 ALLELE-A ZNF DOMAIN WITH ASSOCIATED RECOMBINATION HOTSPOT DNA SEQUENCE III organism=Homo sapiens DNA sequence DC(A2):DG(B21) DA(A3):DT(B20) DC(A4):DG(B19) DG(A5):DC(B18) DT(A6):DA(B17) DG(A7):DC(B16) DG(A8):DC(B15) DC(A9):DG(B14) DT(A10):DA(B13) DA(A11):DT(B12) DG(A12):DC(B11) DG(A13):DC(B10) DG(A14):DC(B9) DA(A15):DT(B8) DG(A16):DC(B7) DG(A17):DC(B6) DC(A18):DG(B5) DC(A19):DG(B4) DT(A20):DA(B3) DC(A21):DG(B2) chainE ( 14) ASN730 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 ( 16) SER732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 ( 17) HIS733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 12 4 0 0 0 ( 20) ARG736 0 0 0 0 0 0 0 0 0 0 0 0 0 22 13 1 0 0 0 0 ( 42) ASP758 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 ( 44) SER760 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 2 0 0 0 0 ( 45) HIS761 0 0 0 0 0 0 0 0 0 0 0 12 12 4 0 0 0 0 0 0 ( 48) ARG764 0 0 0 0 0 0 0 0 0 0 4 12 4 1 0 0 0 0 0 0 ( 69) ARG785 0 0 0 0 0 0 0 0 0 20 12 2 0 0 0 0 0 0 0 0 ( 70) ASP786 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 72) SER788 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 73) ASN789 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 ( 98) ASN814 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) LYS815 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (100) SER816 0 0 0 0 0 0 0 3 9 8 0 0 0 0 0 0 0 0 0 0 (101) HIS817 0 0 0 0 0 12 14 11 0 0 0 0 0 0 0 0 0 0 0 0 (104) ARG820 0 0 0 0 18 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpyvcrecgrgfsNkSHllRhqrthtgekpyvcrecgrgfrDkSHllRhqrthtgekpyvcrecgrgfRDkSNllshqrthtgekpyvcrecgrgfsNKSHllRhqRtht >5ei9_F:beta-beta-alpha_zinc_fingers; title=HUMAN PRDM9 ALLELE-A ZNF DOMAIN WITH ASSOCIATED RECOMBINATION HOTSPOT DNA SEQUENCE I organism=Homo sapiens DNA sequence DT(C2):DA(D42) DC(C3):DG(D41) DC(C4):DG(D40) DA(C5):DT(D39) DC(C6):DG(D38) DG(C7):DC(D37) DT(C8):DA(D36) DG(C9):DC(D35) DG(C10):DC(D34) DC(C11):DG(D33) DT(C12):DA(D32) DA(C13):DT(D31) DG(C14):DC(D30) DG(C15):DC(D29) DG(C16):DC(D28) DA(C17):DT(D27) DG(C18):DC(D26) DG(C19):DC(D25) DC(C20):DG(D24) DC(C21):DG(D23) chainF ( 14) ASN730 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 ( 16) SER732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 ( 17) HIS733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 11 4 0 ( 20) ARG736 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 14 1 0 0 ( 42) ASP758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 ( 44) SER760 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 2 0 0 ( 45) HIS761 0 0 0 0 0 0 0 0 0 0 0 0 0 16 12 8 0 0 0 0 ( 48) ARG764 0 0 0 0 0 0 0 0 0 0 0 0 4 12 3 3 0 0 0 0 ( 69) ARG785 0 0 0 0 0 0 0 0 0 0 0 19 14 2 0 0 0 0 0 0 ( 70) ASP786 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 72) SER788 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 73) ASN789 0 0 0 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 0 0 ( 98) ASN814 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 ( 99) LYS815 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (100) SER816 0 0 0 0 0 0 0 0 0 2 9 9 0 0 0 0 0 0 0 0 (101) HIS817 0 0 0 0 0 0 0 15 13 10 0 0 0 0 0 0 0 0 0 0 (104) ARG820 0 0 0 0 0 0 18 14 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpyvcrecgrgfsNkSHllRhqrthtgekpyvcrecgrgfrDkSHllRhqrthtgekpyvcrecgrgfRDkSNllShqrthtgekpyvcrecgrgfsNKSHllRhqrtht >5eix_BJ:Type_II_DNA_topoisomerase; title=QUINOLONE-STABILIZED CLEAVAGE COMPLEX OF TOPOISOMERASE IV FROM KLEBSIELLA PNEUMONIAE organism=KLEBSIELLA PNEUMONIAE DNA sequence DC(C8):DG(D12) DG(C9):DC(D11) DT(C10):DA(D10) DT(C11):DA(D9) DG(C12):DC(D8) DT(C13):DA(D7) DA(C14):DT(D6) DT(C15):DA(D5) DG(L1):DC(D4) DA(L2):DT(D3) DT(L3):DA(D2) DC(L4):DG(D1) DA(L5):DT(K15) DT(L6):DA(K14) DA(L7):DT(K13) DC(L8):DG(K12) DA(L9):DT(K11) DA(L10):DT(K10) DC(L11):DG(K9) DG(L12):DC(K8) chainB ( 45) LYS444 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (243) TYR1021 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) SER1080 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (303) ALA1081 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG1119 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (391) ILE1172 0 0 0 19 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (545) ARG1326 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 45) LYS444 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 (289) ALA1081 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (324) ARG1119 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (377) ILE1172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 19 0 0 0 (524) ARG1326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 prot.sequence gkladctaqdlnrtelflvegdsaggsakqardreyqaimplkgKilntwevssdevlasqevhdisvaigidpdsddlsqlrygkiciladadsdglhiatllcalfvrhfrtlvkeghvyvalpplyridlgkevyyalteeektgvleqlkrkkgkpnvqrfkglgemnpmqlrettldpntrrlvqlvisdedeqqttaimdmllakkrsedrrnwlqekgmaerlalheftenaylnYsmyvimdralpfigdglkpvqrrivyamselglnasakfkksartvgdvlgkyhphgdSAcyeamvlmaqpfsyryplgdgqgnwgapksfaamRytesrlskyaelllselgqgtvdwvpnfdgtlqepkmlparlpnillngttgIavgmatdipphnlrevakaaitlieqpkttldelldivqgpdfpteaeiitsraeirkiyqngrgsvrmravwskedgavvitalphqvsgakvleqiaaqmrnkklpmvddlrdesdhenptrlvivprsnrvdmeqvmnhlfattdleksyRinlnmigldgrpavknlleilsewlvfrrdtvrrrlnhrlekvlkrlhilegllvaflnidevieiirtedepkpalmsrfgisetqaeailelklrhlakleemkirgeqselekerdqlqailaserkmnnllkkelqadadafgddrrsplhe/gkladctaqdlnrtelflvegdsaggsakqardreyqaimplkgKilntwevssdevlasqevhdisvaigidpdsddlsqlrygkiciladadsdglhiatllcalfvrhfrtlvkeghvyvalpplyrivyyalteeektgvleqlkrqrfkglgemnpmqlrettldpntrrlvqlvisdedeqqttaimdmllakkrsedrrnwlqekgerlalheftenaylnysmyvimdralpfigdglkpvqrrivyamselglnasakfkksartvgdvlgkyhphgdsAcyeamvlmaqpfsyryplgdgqgnwgapksfaamRytesrlskyaelllselgqgtvdwvpnfdgtlqepkmlparlpnillngttgIavgmatdipphnlrevakaaitlieqpkttldelldivqgpdfpteaeiitsraeirkiyqngrgsvrmravwsitalphqvsgakvleqiaaqmrnkklpmvddlrdesdhenptrlvivprsnrvdmeqvmnhlfattdleksyRinlnmigldgrpavknlleilsewlvfrrdtvrrrlnhrlekvlkrlhilegllvaflnidevieiirtedepkpalmsrfgisetqaeailelklrhlakleemkirgeqselekerdqlqailaserkmnnllkkelqadadafgddrrsplh >5eix_G:Type_II_DNA_topoisomerase; title=QUINOLONE-STABILIZED CLEAVAGE COMPLEX OF TOPOISOMERASE IV FROM KLEBSIELLA PNEUMONIAE organism=? DNA sequence DC(H8):DG(I12) DG(H9):DC(I11) DT(H10):DA(I10) DT(H11):DA(I9) DG(H12):DC(I8) DT(H13):DA(I7) DA(H14):DT(I6) DT(H15):DA(I5) chainG ( 45) LYS444 0 0 0 0 0 0 1 1 (213) TYR1021 0 0 0 0 0 1 0 0 (221) ARG1029 0 0 0 0 0 1 0 0 (273) ALA1081 0 0 0 0 0 0 2 0 (276) GLU1084 0 0 0 0 0 3 0 0 (361) ILE1172 0 0 0 21 17 0 0 0 prot.sequence gkladctaqdlnrtelflvegdsaggsakqardreyqaimplkgKilntwevssdevlasqevhdisvaigidpdsddlsqlrygkiciladadsdglhiatllcalfvrhfrtlvkeghvyvalpplyriyalvqrfkglgemnpmqlrettldpntrrlvqlvisdedeqqttaimdmllakkrsedrrnwlqekerlalheftenaylnYsmyvimdRalpfigdglkpvqrrivyamselglnasakfkksartvgdvlgkyhphgdsAcyEamvlmaqpfsyryplgdgqgnwgapksfaamrytesrlskyaelllselgqgtvdwvpnfdgtlqepkmlparlpnillngttgIavgmatdipphnlrevakaaitlieqpkttldelldivqgpdfpteaeiitsraeirkiyqngrgsvrmravwskedgavvitalphqvsgakvleqiaaqmrnkklpmvddlrdesdhenptrlvivprsnrvdmeqvmnhlfattdleksyrinlnmigldgrpavknlleilsewlvfrrdtvrrrlnhrlekvlkrlhilegllvaflnidevieiirtedepkpalmsrfgisetqaeailelklrhlakleemkirgeqselekerdqlqailaserkmnnllkkelqadadafgddrrsplhe >5ejk_A:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase;N-terminal_Zn_binding_domain_of_HIV_integrase; title=CRYSTAL STRUCTURE OF THE ROUS SARCOMA VIRUS INTASOME organism=ROUS SARCOMA VIRUS (STRAIN PRAGUE C) / ROUS SARCOMA VIRUS (STRAIN PRAGUE C) DNA sequence DA(L5):DT(M18) DT(L6):DA(M17) DT(L7):DA(M16) DG(L8):DC(M15) DC(L9):DG(M14) DA(L10):DT(M13) DT(L11):DA(M12) DA(L12):DT(M11) DA(L13):DT(M10) DG(L14):DC(M9) DA(L15):DT(M8) DC(L16):DG(M7) DA(L17):DT(M6) DA(L18):DT(M5) DC(L19):DG(M4) chainA (154) ALA154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (157) GLU157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (158) ARG158 0 0 0 0 0 0 0 0 0 0 0 5 11 3 0 (161) ARG161 0 0 0 0 0 0 0 0 0 0 0 1 3 4 0 (203) GLU203 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 (244) ARG244 0 0 0 0 0 0 0 0 0 0 7 12 2 0 0 prot.sequence plreakdlhtalhigpralskasnismqqarevvqtcphcnsapaleagvnprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavmgrpkaiktdngscftskstrewmarwgiahttgipgnsqgqAmvERanRmmkdkirvlaegdgfmkriptskqgemmakamyalnhfergEntktpiqkhwrptvltegppvkirietgewekgwnvlvwgRgyaavknrdtdkviwvpsrkvkpdi >5ejk_ABG:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase;N-terminal_Zn_binding_domain_of_HIV_integrase; title=CRYSTAL STRUCTURE OF THE ROUS SARCOMA VIRUS INTASOME organism=ROUS SARCOMA VIRUS (STRAIN PRAGUE C) / ROUS SARCOMA VIRUS (STRAIN PRAGUE C) / ROUS SARCOMA VIRUS (STRAIN PRAGUE C) / ROUS SARCOMA VIRUS (STRAIN PRAGUE C) / ROUS SARCOMA VIRUS (STRAIN PRAGUE C) / ROUS SARCOMA VIRUS (STRAIN PRAGUE C) DNA sequence DG(M4):DC(L19) DT(M5):DA(L18) DT(M6):DA(L17) DG(M7):DC(L16) DT(M8):DA(L15) DC(M9):DG(L14) DT(M10):DA(L13) DT(M11):DA(L12) DA(M12):DT(L11) DT(M13):DA(L10) DG(M14):DC(L9) DC(M15):DG(L8) DA(M16):DT(L7) DA(M17):DT(L6) DT(M18):DA(L5) chainA (154) ALA154 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) GLU157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) ARG158 0 3 11 5 0 0 0 0 0 0 0 0 0 0 0 (161) ARG161 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 (203) GLU203 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 (244) ARG244 0 0 2 12 7 0 0 0 0 0 0 0 0 0 0 chainB chainG (244) ARG263 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence plreakdlhtalhigpralskasnismqqarevvqtcphcnsapaleagvnprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavmgrpkaiktdngscftskstrewmarwgiahttgipgnsqgqAmvERanRmmkdkirvlaegdgfmkriptskqgemmakamyalnhfergEntktpiqkhwrptvltegppvkirietgewekgwnvlvwgRgyaavknrdtdkviwvpsrkvkpdi/plreakdlhtalhigpralskasnismqqarevvqtcphcplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavmgrpkaiktdngscftskstrewmarwgiahttgipgnsqgqamveranrmmkdkirvLaeGDgfMkriptskqgemmakamyalnhfergentktpiqkhwrptvlTegppvkirietgewekgwnvlvwgrgyaavknrdtdkviwVpsrkvkpdi/plreakdlhtalhigpralskasnismqqarevvqtcphcprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavmgrpkaiktdngscftskstrewmarwgiahttgamveranrmmkdkirvlaegdgfmkriptskqgemmakamyalnhfergentktpiqkhwrptvltegppvkirietgewekgwnvlvwgrgyaavknrdtdkviwvpsRkvkpdi >5ejk_CE:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase;N-terminal_Zn_binding_domain_of_HIV_integrase; title=CRYSTAL STRUCTURE OF THE ROUS SARCOMA VIRUS INTASOME organism=ROUS SARCOMA VIRUS (STRAIN PRAGUE C) / ROUS SARCOMA VIRUS (STRAIN PRAGUE C) / ROUS SARCOMA VIRUS (STRAIN PRAGUE C) / ROUS SARCOMA VIRUS (STRAIN PRAGUE C) DNA sequence DG(J4):DC(I19) DT(J5):DA(I18) DT(J6):DA(I17) DG(J7):DC(I16) DT(J8):DA(I15) DC(J9):DG(I14) DT(J10):DA(I13) DT(J11):DA(I12) DA(J12):DT(I11) DT(J13):DA(I10) DG(J14):DC(I9) DC(J15):DG(I8) DA(J16):DT(I7) DA(J17):DT(I6) DT(J18):DA(I5) DA(J19):DT(I4) DC(J20):DG(I3) DT(J21):DA(I2) DC(J22):DG(I1) chainC (250) ARG263 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (154) ALA154 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) GLU157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) ARG158 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) ARG161 0 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) GLU203 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG244 0 0 8 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence plreakdlhtalhigpralskasnismqqarevvqtcphcglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavmgrpkaiktdngscftskstrewmarwgiahttgipgnsqgqamveranrmmkdkirvlaegdgfmkriptskqgemmakamyalnhfergentktpiqkhwrptvltegppvkirietgewekgwnvlvwgrgyaavknrdtdkviwvpsRkvkpdi/plreakdlhtalhigpralskasnismqqarevvqtcphcnsapaleagvnprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavmgrpkaiktdngscftskstrewmarwgiahttgipgnsqgqAmvERanRmmkdkirvlaegdgfmkriptskqgemmakamyalnhfergEntktpiqkhwrptvltegppvkirietgewekgwnvlvwgRgyaavknrdtdkviwvpsrkvkpdi >5emc_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=TRANSCRIPTION FACTOR GRDBD AND SMGRE COMPLEX organism=Homo sapiens DNA sequence DC(D28):DG(C18) DA(D29):DT(C17) DG(D30):5CM(C16) DA(D31):DT(C15) DA(D32):DT(C14) 5CM(D33):DG(C13) DA(D34):DT(C12) DT(D35):DA(C11) DG(D36):DC(C10) DA(D37):DT(C9) DT(D38):DA(C8) DG(D39):5CM(C7) DT(D40):DA(C6) DT(D41):DA(C5) 5CM(D42):DG(C4) DT(D43):DA(C3) DG(D44):DC(C2) chainA ( 24) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 ( 25) VAL462 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 ( 29) ARG466 0 0 0 0 0 0 0 0 0 0 9 10 1 0 0 0 0 prot.sequence klclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnl >5emc_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=TRANSCRIPTION FACTOR GRDBD AND SMGRE COMPLEX organism=Homo sapiens DNA sequence DC(C2):DG(D44) DA(C3):DT(D43) DG(C4):5CM(D42) DA(C5):DT(D41) DA(C6):DT(D40) 5CM(C7):DG(D39) DA(C8):DT(D38) DT(C9):DA(D37) DC(C10):DG(D36) DA(C11):DT(D35) DT(C12):DA(D34) DG(C13):5CM(D33) DT(C14):DA(D32) DT(C15):DA(D31) 5CM(C16):DG(D30) DT(C17):DA(D29) DG(C18):DC(D28) chainA ( 24) LYS461 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL462 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG466 0 0 0 0 1 10 9 0 0 0 0 0 0 0 0 0 0 chainB ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 prot.sequence klclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnl/pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnle >5emp_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=TRANSCRIPTION FACTOR GRDBD AND MMGRE COMPLEX organism=Homo sapiens DNA sequence DC(D3):DG(C18) DA(D4):DT(C17) DG(D5):DC(C16) DA(D6):DT(C15) DA(D7):DT(C14) DC(D8):DG(C13) DA(D9):DT(C12) DT(D10):DA(C11) 5CM(D11):DG(C10) DA(D12):DT(C9) DT(D13):DA(C8) DG(D14):DC(C7) DT(D15):DA(C6) DT(D16):DA(C5) DC(D17):DG(C4) DT(D18):DA(C3) DG(D19):DC(C2) chainA ( 24) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 3 0 ( 25) VAL462 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 ( 29) ARG466 0 0 0 0 0 0 0 0 0 0 10 9 1 0 0 0 0 chainB ( 24) LYS461 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL462 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG466 0 0 0 0 1 8 11 0 0 0 0 0 0 0 0 0 0 prot.sequence klclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnle/klclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnle >5emp_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=TRANSCRIPTION FACTOR GRDBD AND MMGRE COMPLEX organism=Homo sapiens DNA sequence DC(C2):DG(D19) DA(C3):DT(D18) DG(C4):DC(D17) DA(C5):DT(D16) DA(C6):DT(D15) DC(C7):DG(D14) DA(C8):DT(D13) DT(C9):DA(D12) DG(C10):5CM(D11) DA(C11):DT(D10) DT(C12):DA(D9) DG(C13):DC(D8) DT(C14):DA(D7) DT(C15):DA(D6) DC(C16):DG(D5) DT(C17):DA(D4) DG(C18):DC(D3) chainB ( 24) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 ( 25) VAL462 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 29) ARG466 0 0 0 0 0 0 0 0 0 0 11 8 1 0 0 0 0 prot.sequence klclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnle >5emq_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=TRANSCRIPTION FACTOR GRDBD AND GRE COMPLEX organism=Homo sapiens DNA sequence DC(C2):DG(D19) DA(C3):DT(D18) DG(C4):DC(D17) DA(C5):DT(D16) DA(C6):DT(D15) DC(C7):DG(D14) DA(C8):DT(D13) DT(C9):DA(D12) DG(C10):DC(D11) DA(C11):DT(D10) DT(C12):DA(D9) DG(C13):DC(D8) DT(C14):DA(D7) DT(C15):DA(D6) DC(C16):DG(D5) DT(C17):DA(D4) DG(C18):DC(D3) chainA ( 24) LYS461 0 3 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL462 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG466 0 0 0 0 1 10 13 0 0 0 0 0 0 0 0 0 0 chainB ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 0 17 10 1 0 0 0 0 prot.sequence klclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnl/pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnle >5emq_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=TRANSCRIPTION FACTOR GRDBD AND GRE COMPLEX organism=Homo sapiens DNA sequence DC(C2):DG(D19) DA(C3):DT(D18) DG(C4):DC(D17) DA(C5):DT(D16) DA(C6):DT(D15) DC(C7):DG(D14) DA(C8):DT(D13) DT(C9):DA(D12) DG(C10):DC(D11) DA(C11):DT(D10) DT(C12):DA(D9) DG(C13):DC(D8) DT(C14):DA(D7) DT(C15):DA(D6) DC(C16):DG(D5) DT(C17):DA(D4) DG(C18):DC(D3) chainB ( 25) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 ( 26) VAL462 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 ( 30) ARG466 0 0 0 0 0 0 0 0 0 0 17 10 1 0 0 0 0 prot.sequence pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnle >5eoz_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=MUTAGENICITY OF 7-BENZYL GUANINE LESION AND REPLICATION BY HUMAN DNA POLYMERASE BETA organism=Homo sapiens DNA sequence DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 0 4 0 0 0 0 0 0 0 (262) TYR271 8 0 0 0 0 0 0 0 0 0 (274) ARG283 4 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5esp_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF LAGLIDADG MEGANUCLEASE I-PANMI WITH COORDINATED CALCIUM IONS organism=PODOSPORA ANSERINA DNA sequence DG(H2):DC(G27) DG(H3):DC(G26) DC(H4):DG(G25) DT(H5):DA(G24) DT(H6):DA(G23) DG(H7):DC(G22) DA(H8):DT(G21) DT(H9):DA(G20) DA(H10):DT(G19) DA(H11):DT(G18) DG(H12):DC(G17) DG(H13):DC(G16) DA(H14):DT(G15) DT(H15):DA(G14) DT(H16):DA(G13) DA(H17):DT(G12) DT(H18):DA(G11) DG(H19):DC(G10) DA(H20):DT(G9) DG(H21):DC(G8) DG(H22):DC(G7) DA(H23):DT(G6) DG(H24):DC(G5) DC(H25):DG(G4) DG(H26):DC(G3) DG(H27):DC(G2) chainA ( 16) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 18) MET24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 ( 26) LYS32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 ( 27) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 ( 32) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 12 1 0 0 0 ( 36) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 ( 38) VAL44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 40) SER46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 3 0 0 0 0 0 0 0 0 0 ( 62) PHE68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 ( 64) MET70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 ( 68) SER74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 70) GLN76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 7 0 0 0 0 0 0 0 0 ( 72) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 6 0 0 0 0 0 0 ( 74) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 (173) CYS179 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) SER181 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) VAL183 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) PHE185 0 0 0 1 9 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER187 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) THR189 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) SER190 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) ALA195 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) LYS197 0 0 0 0 1 7 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) ILE201 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) THR203 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) SER225 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ASP227 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) ARG229 0 0 0 0 0 0 0 0 0 10 12 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) THR231 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LYS235 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) THR237 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klnpsyisgfvdgegSfMltiikdnKYklgwRvvcRfViSlhkkdlsllnkikeffdvgnvFlMtkdSaQyRvEslkgldliinhfdkyplitkkqadyklfkmahnliknkshltkegllelvaikavinnglnndlsiafpgintilrpdtslpqilnpfwlsgfvdaegCfSvVvFkSkTSklgeAvKlsfIlTqsnrdeylikslieylgcgntSlDpRgTidfKvTnfssikdiivpffikyplkgnknldftdfcevvrlmenkshltkegldqikkirnrmntnr >5ewe_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF HUMAN DNA POLYMERASE ETA INSERTING RCTP OPPOSITE TEMPLATE G organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (317) SER322 0 2 0 0 0 0 0 0 (377) ARG382 0 0 0 0 10 18 0 0 (418) PHE423 0 6 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >5ewf_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY COMPLEX OF HUMAN DNA POLYMERASE ETA INSERTING RCTP OPPOSITE AN 8-OXODEOXYGUANOSINE LESION organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (318) SER322 0 1 0 0 0 0 0 0 (378) ARG382 0 0 0 0 9 16 0 0 (416) PHE423 0 3 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntstewsppltmlFlcatkfsas >5exh_C: title=CRYSTAL STRUCTURE OF MTET3-CXXC DOMAIN IN COMPLEX WITH 5- CARBOXYLCYTOSINE DNA AT 1.3 ANGSTROMS RESOLUTION. organism=MUS MUSCULUS DNA sequence DG(A1):DC(B12) DA(A2):DT(B11) DA(A3):DT(B10) DT(A4):DA(B9) DC(A5):DG(B8) DG(A7):DG(B7) DG(A8):DC(B5) DA(A9):DT(B4) DT(A10):DA(B3) DT(A11):DA(B2) DC(A12):DG(B1) chainC ( 2) LYS53 0 0 5 2 0 0 0 0 0 0 0 ( 29) THR80 0 0 0 0 0 1 0 0 0 0 0 ( 30) HIS81 0 0 0 15 14 27 0 0 0 0 0 ( 31) GLN82 0 0 0 0 0 2 0 0 0 0 0 prot.sequence kKrkrcgtcdpcrrlencgsctsctnrrTHQicklrkcevlkkka >5eyb_B:Homeodomain-like; title=X-RAY STRUCTURE OF REB1-TER COMPLEX organism=Schizosaccharomyces pombe DNA sequence DA(F2):DT(E26) DA(F3):DT(E25) DA(F4):DT(E24) DA(F5):DT(E23) DG(F6):DC(E22) DT(F7):DA(E21) DG(F8):DC(E20) DC(F9):DG(E19) DA(F10):DT(E18) DT(F11):DA(E17) DT(F12):DA(E16) DA(F13):DT(E15) DC(F14):DG(E14) DC(F15):DG(E13) DC(F16):DG(E12) DT(F17):DA(E11) DT(F18):DA(E10) DA(F19):DT(E9) DC(F20):DG(E8) DC(F21):DG(E7) DT(F22):DA(E6) DT(F23):DA(E5) DT(F24):DA(E4) DT(F25):DA(E3) DA(F26):DT(E2) chainB ( 58) ARG212 0 0 0 0 0 13 13 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG216 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) LYS229 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) LYS297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 7 3 0 0 0 0 0 (146) TYR300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 (147) HIS301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 7 0 0 0 0 0 0 0 (150) ARG304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (151) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 (193) ASN347 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 (196) ARG350 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 6 0 0 0 0 0 0 0 0 0 (197) ASP351 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 (200) ARG354 0 0 0 0 0 0 0 0 0 0 0 0 1 9 4 0 0 0 0 0 0 0 0 0 0 (201) ASP355 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG407 0 0 0 0 0 0 0 0 0 0 0 0 12 7 0 0 0 0 0 0 0 0 0 0 0 (245) LEU408 0 0 0 0 0 0 0 0 0 0 6 7 3 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG411 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) TYR412 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rwtaehwdylerrmqnfcqtysldhtqvadslhekrlhgplsslvkllvqempsftrRtilRhlralynipgyeKysrknssgrgdfgvqetaiisqevhnfimdqgwseyqfcnqiwagkcpktirmfysnlykklshrdaKsiYHhvRRaynpfedrcvwskeedeelrknvvehgkcwtkigrkmarmpNdcRDrwRDvvrfgdklkrnawsleeetqllqivaedinwtlvaqmlgtrtRLqcRYkfqqltkaaskfelqenvwlleriydsllnnggkihwenivkeangrwtrdqmlfqfinlkkmipsydnlplleatksaiddfkvvls >5eyo_A:HLH,_helix-loop-helix_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF THE MAX BHLH DOMAIN IN COMPLEX WITH 5- CARBOXYL CYTOSINE DNA organism=Homo sapiens DNA sequence DA(B4) DG(B5) DT(B6) DA(B7) DG(B8) DC(B9) DA(B10) DG(B12) DT(B13) DG(B14) DC(B15) DT(B16) DA(B17) DC(B18) DT(B19) chainA ( 9) HIS28 0 0 0 0 0 0 0 0 5 9 2 0 0 0 0 ( 10) ASN29 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 13) GLU32 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 17) ARG36 0 0 0 0 0 0 0 13 3 0 0 0 0 0 0 prot.sequence hmadkrahHNalErkrRdhikdsfhslrdsvpslqgekasraqildkateyiqymrrknhthqqdiddlkrqnalleqqvralekar >5f0q_A: title=CRYSTAL STRUCTURE OF C-TERMINAL DOMAIN OF THE HUMAN DNA PRIMASE LARGE SUBUNIT WITH BOUND DNA TEMPLATE/RNA PRIMER organism=Homo sapiens DNA sequence DG(D1) DC(D2) DC(D3) DG(D4) DC(D5) DC(D6) DA(D7) DA(D8) DC(D9) DA(D10) DT(D11) DA(D12) chainA ( 34) HIS303 0 0 0 0 0 0 6 0 0 0 0 0 ( 38) MET307 0 0 0 0 0 0 10 0 0 0 0 0 ( 78) TYR347 0 0 0 0 9 0 0 0 0 0 0 0 ( 79) ASN348 0 0 0 0 3 5 0 0 0 0 0 0 ( 82) HIS351 0 0 0 0 0 5 1 0 0 0 0 0 ( 91) THR360 0 0 0 0 0 0 0 5 0 0 0 0 ( 93) TYR362 0 0 0 0 0 0 9 9 0 0 0 0 ( 94) THR363 0 0 0 0 0 0 0 4 2 5 0 0 ( 95) PRO364 0 0 0 0 0 0 0 0 0 2 0 0 (174) HIS443 0 0 0 0 0 0 0 0 0 31 0 0 (176) ASN445 0 0 0 0 0 0 0 0 0 2 0 0 (180) CYS449 0 0 0 0 0 0 0 0 0 0 3 0 prot.sequence kisldqidllstksfppcmrqlhkalrenhhlrHggrMqyglflkgigltleqalqfwkqefikgkmdpdkfdkgysYNirHSfgkegkrTdYTPfsclkiilsnppsqgdyhgcpfrhsdpellkqklqsykispggisqildlvkgthyqvacqkyfemihnvddcgfslnHpNqffCesqriln >5f0s_B: title=CRYSTAL STRUCTURE OF C-TERMINAL DOMAIN OF THE HUMAN DNA PRIMASE LARGE SUBUNIT WITH BOUND DNA TEMPLATE/RNA PRIMER AND MANGANESE ION organism=Homo sapiens DNA sequence DG(F1) DC(F2) DC(F3) DG(F4) DC(F5) DC(F6) DA(F7) DA(F8) DC(F9) DA(F10) chainB ( 33) HIS303 0 0 0 0 0 0 4 0 0 0 ( 37) MET307 0 0 0 0 0 0 15 0 0 0 ( 77) TYR347 0 0 0 0 7 0 0 0 0 0 ( 78) ASN348 0 0 0 0 0 3 0 0 0 0 ( 81) HIS351 0 0 0 0 0 4 0 0 0 0 ( 90) THR360 0 0 0 0 0 0 0 6 0 0 ( 92) TYR362 0 0 0 0 0 0 14 10 0 0 ( 93) THR363 0 0 0 0 0 0 0 4 1 0 prot.sequence isldqidllstksfppcmrqlhkalrenhhlrHggrMqyglflkgigltleqalqfwkqefikgkmdpdkfdkgysYNirHsfgkegkrTdYTpfsclkiilsnppsqgdyhgcpfrhsdpellkqklqsykispggisqildlvkgthyqvacqkyfemihnvddcgfslnhpnqffcesqril >5f3w_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF THE ATPRS-MRE11/RAD50-DNA COMPLEX organism=METHANOCALDOCOCCUS JANNASCHII DSM 2661 DNA sequence DG(F5):DC(E25) DA(F6):DT(E24) DA(F7):DT(E23) DT(F8):DA(E22) DG(F9):DC(E21) DT(F10):DA(E20) DG(F11):DC(E19) DT(F12):DA(E18) DG(F13):DC(E17) DT(F14):DA(E16) DC(F15):DG(E15) DT(F16):DA(E14) DC(F17):DG(E13) DA(F18):DT(E12) DA(F19):DT(E11) DT(F20):DA(E10) DC(F21):DG(E9) DC(F22):DG(E8) DC(F23):DG(E7) DA(F24):DT(E6) DA(F25):DT(E5) DC(F26):DG(E4) chainB ( 54) SER54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 0 0 0 0 0 ( 92) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 6 prot.sequence msmilkeirmnnfkshvnsrikfekgivaiigengsgkssifeavffalfgagSnfnydtiitkgkksvyveldfevngnnykiireydsgRggaklykngkpyattisavnkavneilgvdrnmflnsiyikqgeiakflslkpsekletvakllgidefekcyqkmgeivkeyekrleriegekemsnlekekekltkfveyldkvrrifgrngfqaylrekyvpliqkylneafsefdlpysfveltkdfevrvhapngvltidnlsggeqiavalslrlaianalignrveciildeptvyldenrraklaeifrkvksipqmiiithhreledvadviinvkkdgnvskvking >5f3w_BD:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF THE ATPRS-MRE11/RAD50-DNA COMPLEX organism=METHANOCALDOCOCCUS JANNASCHII DSM 2661 DNA sequence DG(F5):DC(E25) DA(F6):DT(E24) DA(F7):DT(E23) DT(F8):DA(E22) DG(F9):DC(E21) DT(F10):DA(E20) DG(F11):DC(E19) DT(F12):DA(E18) DG(F13):DC(E17) DT(F14):DA(E16) DC(F15):DG(E15) DT(F16):DA(E14) DC(F17):DG(E13) DA(F18):DT(E12) DA(F19):DT(E11) DT(F20):DA(E10) DC(F21):DG(E9) DC(F22):DG(E8) DC(F23):DG(E7) DA(F24):DT(E6) DA(F25):DT(E5) DC(F26):DG(E4) chainB ( 54) SER54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 0 0 0 0 0 ( 92) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 6 chainD ( 54) SER54 0 0 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG92 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence msmilkeirmnnfkshvnsrikfekgivaiigengsgkssifeavffalfgagSnfnydtiitkgkksvyveldfevngnnykiireydsgRggaklykngkpyattisavnkavneilgvdrnmflnsiyikqgeiakflslkpsekletvakllgidefekcyqkmgeivkeyekrleriegekemsnlekekekltkfveyldkvrrifgrngfqaylrekyvpliqkylneafsefdlpysfveltkdfevrvhapngvltidnlsggeqiavalslrlaianalignrveciildeptvyldenrraklaeifrkvksipqmiiithhreledvadviinvkkdgnvskvking/msmilkeirmnnfkshvnsrikfekgivaiigengsgkssifeavffalfgagSnfnydtiitkgkksvyveldfevngnnykiireydsgRggaklykngkpyattisavnkavneilgvdrnmflnsiyikqgeiakflslkpsekletvakllgidefekcyqkmgeivkeyekrleriegelnynlekekekltkfveyldkvrrifgrngfqaylrekyvpliqkylneafsefdlpysfveltkdfevrvhapngvltidnlsggeqiavalslrlaianalignrveciildeptvyldenrraklaeifrkvksipqmiiithhreledvadviinvkkdgnvskvking >5f55_A:DHH_phosphoesterases; title=STRUCTURE OF RECJ COMPLEXED WITH DNA organism=Deinococcus radiodurans DNA sequence DG(C206) DG(C205) DG(C194) DA(C195) DT(C196) DG(C197) DT(C198) DA(C199) DC(C200):DG(C205) DG(C201) DC(C202) DT(C203) DA(C204) chainA ( 80) TYR80 0 0 2 0 0 0 0 0 0 0 0 0 0 (114) TYR114 0 0 42 0 0 0 0 0 0 0 0 0 0 (224) VAL224 0 0 0 12 3 0 0 0 0 0 0 0 0 (265) ARG265 0 0 0 0 0 0 7 0 0 0 0 0 0 (268) ALA268 0 0 0 0 0 1 0 0 0 0 0 0 0 (269) PHE269 0 0 0 0 0 30 38 0 0 0 0 0 0 (349) ILE349 0 0 0 0 1 0 0 0 0 0 0 0 0 (352) SER352 0 0 0 2 10 0 0 0 0 0 0 0 0 (353) LYS353 0 0 0 0 2 1 0 0 0 0 0 0 0 (356) GLU356 0 0 0 0 0 1 0 0 0 0 0 0 0 (373) ARG373 0 0 0 2 0 0 0 0 0 0 0 0 0 (393) ARG393 0 0 1 0 0 0 0 0 0 0 0 0 0 (400) ALA400 0 0 0 3 0 0 0 0 0 0 0 0 0 (485) GLN485 0 0 0 0 0 0 0 0 0 0 5 0 0 (492) LYS492 0 0 0 0 0 0 0 0 0 0 6 3 0 (494) MET494 0 0 0 0 0 0 0 0 0 0 7 0 0 (496) TYR496 0 0 0 0 0 0 0 0 0 55 2 0 0 (515) ASN515 0 0 0 0 0 0 0 0 0 0 3 5 0 (517) TRP517 0 0 0 0 0 0 0 0 0 0 0 63 1 (524) GLU524 0 0 0 0 0 0 0 0 0 0 2 0 0 (526) HIS526 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence msrpahwllappasrdallatmrewqvsppvaqvlcgrdlrtellalpleltpnpalreaarhivaavregkririhgdYdadgvsatatlvlglraiganvhgfiphrlnegYgihpdrvpehaaaadlvvtvdcgvsnldevksllatgtevvvtdhhapgenfpeclvvhphltpdydpdrhnltgagvayhllwavyeelgrpeprallplatlgtvadVapllgenralvraglaemartelpglralmnekrvrqptaRdvAFilaprinaagrmgeadralellttpsdheakslaayleirnqerrkiqddmfaqalqladpndpalvlthddwhagvmgIvaSKlvEtfnrpvyivaqgkgsvRstpgisavqglresrdllgRfgghpgAagfsldpqnfgalrerihgyvrqfptpvpavrldaplpvaaltpellselsilepfgegnprplwhlrgpltdtrlvgkqgdvlQfrfggvKgMkYserddaagerdvaaelalNeWkgrtslElHaaalrplaplalagteeglptlprlnpreamtflktgaaayaeqgvatylrdnvpgltlldtnaphpggdlilyglppesalrrwlheaqeqggrvafalgpktlaeldaaltlakllpdshteaaqeaaadayrswqwahhyrvlndagwsasvyamlglpvpaalpkaaealalaag >5f7q_C:Actin-like_ATPase_domain;"Winged_helix"_DNA-binding_domain; title=ROK REPRESSOR LMO0178 FROM LISTERIA MONOCYTOGENES BOUND TO OPERATOR organism=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) DNA sequence DA(K2):DT(F30) DC(K3):DG(F29) DT(K4):DA(F28) DT(K5):DA(F27) DA(K6):DT(F26) DC(K7):DG(F25) DT(K8):DA(F24) DT(K9):DA(F23) DA(K10):DT(F22) DA(K11):DT(F21) DT(K12):DA(F20) DT(K13):DA(F19) DC(K14):DG(F18) DA(K15):DT(F17) DT(K16):DA(F16) DT(K17):DA(F15) DG(K18):DC(F14) DA(K19):DT(F13) DA(K20):DT(F12) DC(K21):DG(F11) DG(K22):DC(F10) DA(K23):DT(F9) DA(K24):DT(F8) DG(K25):DC(F7) DT(K26):DA(F6) DA(K27):DT(F5) DA(K28):DT(F4) DG(K29):DC(F3) DT(K30):DA(F2) chainC ( 7) LYS9 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) MET43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 ( 42) SER44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 6 1 0 0 0 0 0 0 0 0 0 0 ( 43) THR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 ( 46) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 5 5 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 2 0 0 0 0 0 0 prot.sequence ilrkgnKdlikdinrytvlnlirekgeitrteiakkcdfgMSTlTYilddlqqegiilegaetsstggRraklvrfnkdygfvvsvkveeeqllfaltdlnaeiientsipfssekkpeeaieliaknvkkmcgnrdmnhllgvgiaisglvnrkkgtvirstmlgwenvaleamlhahfpdipvyvdknincytlaelwlgegkqsnnfatvsvgaglglsvvinrqiyygaqggagefghttiqpggykchcgqkgclemyasefyfrnrgeeldfhfdkvaksaragdematelmgkmgeylgygirniintfnpekviivgeglhhrdlfltkideiasqnffsgagfeteitttsledpawlqgaallvihqlfqvpiye >5f7q_CEJL:Actin-like_ATPase_domain;"Winged_helix"_DNA-binding_domain; title=ROK REPRESSOR LMO0178 FROM LISTERIA MONOCYTOGENES BOUND TO OPERATOR organism=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) DNA sequence DA(K2):DT(F30) DC(K3):DG(F29) DT(K4):DA(F28) DT(K5):DA(F27) DA(K6):DT(F26) DC(K7):DG(F25) DT(K8):DA(F24) DT(K9):DA(F23) DA(K10):DT(F22) DA(K11):DT(F21) DT(K12):DA(F20) DT(K13):DA(F19) DC(K14):DG(F18) DA(K15):DT(F17) DT(K16):DA(F16) DT(K17):DA(F15) DG(K18):DC(F14) DA(K19):DT(F13) DA(K20):DT(F12) DC(K21):DG(F11) DG(K22):DC(F10) DA(K23):DT(F9) DA(K24):DT(F8) DG(K25):DC(F7) DT(K26):DA(F6) DA(K27):DT(F5) DA(K28):DT(F4) DG(K29):DC(F3) DT(K30):DA(F2) chainC ( 7) LYS9 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) MET43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 ( 42) SER44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 6 1 0 0 0 0 0 0 0 0 0 0 ( 43) THR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 ( 46) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 5 5 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 2 0 0 0 0 0 0 chainE ( 8) LYS9 0 0 0 0 0 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) MET43 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER44 0 0 0 0 0 0 0 6 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR45 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) THR47 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR48 0 0 0 0 0 0 0 4 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG71 0 0 3 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 8) LYS9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) MET43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 ( 43) SER44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 6 0 0 0 0 0 0 0 ( 44) THR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 46) THR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 ( 47) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 5 0 0 0 0 0 0 0 ( 70) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 3 0 0 chainL ( 8) LYS9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 ( 42) MET43 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER44 0 0 0 0 0 0 0 0 0 0 0 6 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR45 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) THR47 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR48 0 0 0 0 0 0 0 0 0 0 0 5 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG71 0 0 0 0 0 0 3 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ilrkgnKdlikdinrytvlnlirekgeitrteiakkcdfgMSTlTYilddlqqegiilegaetsstggRraklvrfnkdygfvvsvkveeeqllfaltdlnaeiientsipfssekkpeeaieliaknvkkmcgnrdmnhllgvgiaisglvnrkkgtvirstmlgwenvaleamlhahfpdipvyvdknincytlaelwlgegkqsnnfatvsvgaglglsvvinrqiyygaqggagefghttiqpggykchcgqkgclemyasefyfrnrgeeldfhfdkvaksaragdematelmgkmgeylgygirniintfnpekviivgeglhhrdlfltkideiasqnffsgagfeteitttsledpawlqgaallvihqlfqvpiye/dilrkgnKdlikdinrytvlnlirekgeitrteiakkcdfgMSTlTYilddlqqegiilegaetsstggRraklvrfnkdygfvvsvkveeeqllfaltdlnaeiientsipfssekkpeeaieliaknvkkmcgnrdmnhllgvgiaisglvnrkkgtvirstmlgwenvaleamlhahfpdipvyvdknincytlaelwlgegkqsnnfatvsvgaglglsvvinrqiyygaqggagefghttiqpggykchcgqkgclemyasefyfrnrgeelkeayptselndfhfdkvaksaragdematelmgkmgeylgygirniintfnpekviivgeglhhrdlfltkideiasqnffsgagfeteitttsledpawlqgaallvihqlfqvpiye/dilrkgnKdlikdinrytvlnlirekgeitrteiakkcdfgMSTlTYilddlqqegiilegaetsstggRraklvrfnkdygfvvsvkveeeqllfaltdlnaeiientsipfssekkpeeaieliaknvkkmcgnrdmnhllgvgiaisglvnrkkgtvirstmlgwenvaleamlhahfpdipvyvdknincytlaelwlgegkqsnnfatvsvgaglglsvvinrqiyygaqggagefghttiqpggykchcgqkgclemyasefyfrnrgeelkeayptselndfhfdkvaksaragdematelmgkmgeylgygirniintfnpekviivgeglhhrdlfltkideiasqnffsgagfeteitttsledpawlqgaallvihqlfqvpiye/dilrkgnKdlikdinrytvlnlirekgeitrteiakkcdfgMSTlTYilddlqqegiilegaetsstggRraklvrfnkdygfvvsvkveeeqllfaltdlnaeiientsipfssekkpeeaieliaknvkkmcgnrdmnhllgvgiaisglvnrkkgtvirstmlgwenvaleamlhahfpdipvyvdknincytlaelwlgegkqsnnfatvsvgaglglsvvinrqiyygaqggagefghttiqpggykchcgqkgclemyasefyfrnrgeeldfhfdkvaksaragdematelmgkmgeylgygirniintfnpekviivgeglhhrdlfltkideiasqnffsgagfeteitttsledpawlqgaallvihqlfqvpiye >5f8a_A:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF THE TERNARY ECORV-DNA-LU COMPLEX WITH UNCLEAVED DNA SUBSTRATE. LANTHANIDE BINDING TO ECORV-DNA COMPLEX INHIBITS CLEAVAGE. organism=Escherichia coli DNA sequence DA(C1):DT(D12) DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) DT(C12):DA(D1) chainA ( 69) ASN70 0 0 0 1 2 6 0 0 0 0 0 0 (103) LYS104 0 0 0 0 0 0 0 0 0 1 0 0 (105) THR106 0 0 0 0 0 0 0 11 0 0 0 0 (179) LEU180 0 0 0 0 0 0 0 0 0 0 0 1 (182) SER183 0 0 0 0 0 0 0 7 4 0 0 0 (184) ASN185 0 0 0 0 0 0 0 10 18 0 0 0 (185) THR186 0 0 0 0 0 5 3 9 0 0 0 0 (187) ASN188 0 0 0 0 0 0 0 4 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtKvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdLagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >5f8a_AB:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF THE TERNARY ECORV-DNA-LU COMPLEX WITH UNCLEAVED DNA SUBSTRATE. LANTHANIDE BINDING TO ECORV-DNA COMPLEX INHIBITS CLEAVAGE. organism=Escherichia coli DNA sequence DA(C1):DT(D12) DA(C2):DT(D11) DA(C3):DT(D10) DG(C4):DC(D9) DA(C5):DT(D8) DT(C6):DA(D7) DA(C7):DT(D6) DT(C8):DA(D5) DC(C9):DG(D4) DT(C10):DA(D3) DT(C11):DA(D2) DT(C12):DA(D1) chainA ( 69) ASN70 0 0 0 1 2 6 0 0 0 0 0 0 (103) LYS104 0 0 0 0 0 0 0 0 0 1 0 0 (105) THR106 0 0 0 0 0 0 0 11 0 0 0 0 (179) LEU180 0 0 0 0 0 0 0 0 0 0 0 1 (182) SER183 0 0 0 0 0 0 0 7 4 0 0 0 (184) ASN185 0 0 0 0 0 0 0 10 18 0 0 0 (185) THR186 0 0 0 0 0 5 3 9 0 0 0 0 (187) ASN188 0 0 0 0 0 0 0 4 0 0 0 0 chainB ( 37) LYS38 0 0 0 0 0 0 3 0 0 0 0 0 ( 69) ASN70 0 0 0 0 0 0 6 2 1 0 0 0 (105) THR106 0 0 0 0 10 0 0 0 0 0 0 0 (182) SER183 0 0 0 2 7 0 0 0 0 0 0 0 (184) ASN185 0 0 0 18 10 0 0 0 0 0 0 0 (185) THR186 0 0 0 0 9 3 5 0 0 0 0 0 (187) ASN188 0 0 0 0 4 0 0 0 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtKvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdLagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtKvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >5f99_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=X-RAY STRUCTURE OF THE MMTV-A NUCLEOSOME CORE PARTICLE organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DT(I-70):DA(J70) DG(I-69):DC(J69) DC(I-68):DG(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DC(I-65):DG(J65) DA(I-64):DT(J64) DG(I-63):DC(J63) DT(I-62):DA(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DA(I-58):DT(J58) DA(I-57):DT(J57) DC(I-56):DG(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DT(I-53):DA(J53) DC(I-52):DG(J52) DA(I-51):DT(J51) DC(I-50):DG(J50) DC(I-49):DG(J49) DT(I-48):DA(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DT(I-45):DA(J45) DG(I-44):DC(J44) DT(I-43):DA(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DG(I-36):DC(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DT(I-33):DA(J33) DC(I-32):DG(J32) DT(I-31):DA(J31) DG(I-30):DC(J30) DT(I-29):DA(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DG(I-26):DC(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DC(I-19):DG(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DC(I-16):DG(J16) DT(I-15):DA(J15) DC(I-14):DG(J13) DG(I-12):DC(J12) DC(I-11):DG(J11) DT(I-10):DA(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DT(I-7):DA(J7) DC(I-6):DG(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DT(I-2):DA(J2) DA(I-1):DT(J1) DT(I0):DA(J0) DC(I1):DG(J-1) DC(I2):DG(J-2) DT(I3):DA(J-3) DT(I4):DA(J-4) DC(I5):DG(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DT(I8):DA(J-8) DT(I9):DA(J-9) DT(I10):DA(J-10) DC(I11):DG(J-11) DC(I12):DG(J-12) DA(I13):DT(J-13) DG(I14):DC(J-14) DA(I15):DT(J-15) DG(I16):DC(J-16) DG(I17):DC(J-17) DG(I18):DC(J-18) DT(I19):DA(J-19) DC(I20):DG(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DC(I23):DG(J-23) DC(I24):DG(J-24) DC(I25):DG(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DA(I30):DT(J-30) DC(I31):DG(J-31) DC(I32):DG(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DG(I35):DC(J-35) DG(I36):DC(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DA(I45):DT(J-45) DG(I46):DC(J-46) DG(I47):DC(J-47) DT(I48):DA(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DG(I54):DC(J-54) DA(I55):DT(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DC(I62):DG(J-62) DA(I63):DT(J-63) DC(I64):DG(J-64) DA(I65):DT(J-65) DG(I66):DC(J-66) DT(I67):DA(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainA ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 35) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 5) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 1) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkte/gkkrrktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkRstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirgera/gkggakrrrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktraKaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkktessksaksk/RRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >5f99_C:Histone-fold; title=X-RAY STRUCTURE OF THE MMTV-A NUCLEOSOME CORE PARTICLE organism=? DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DT(I-70):DA(J70) DG(I-69):DC(J69) DC(I-68):DG(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DC(I-65):DG(J65) DA(I-64):DT(J64) DG(I-63):DC(J63) DT(I-62):DA(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DA(I-58):DT(J58) DA(I-57):DT(J57) DC(I-56):DG(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DT(I-53):DA(J53) DC(I-52):DG(J52) DA(I-51):DT(J51) DC(I-50):DG(J50) DC(I-49):DG(J49) DT(I-48):DA(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DT(I-45):DA(J45) DG(I-44):DC(J44) DT(I-43):DA(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DG(I-36):DC(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DT(I-33):DA(J33) DC(I-32):DG(J32) DT(I-31):DA(J31) DG(I-30):DC(J30) DT(I-29):DA(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DG(I-26):DC(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DC(I-19):DG(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DC(I-16):DG(J16) DT(I-15):DA(J15) DC(I-14):DG(J13) DG(I-12):DC(J12) DC(I-11):DG(J11) DT(I-10):DA(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DT(I-7):DA(J7) DC(I-6):DG(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DT(I-2):DA(J2) DA(I-1):DT(J1) DT(I0):DA(J0) DC(I1):DG(J-1) DC(I2):DG(J-2) DT(I3):DA(J-3) DT(I4):DA(J-4) DC(I5):DG(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DT(I8):DA(J-8) DT(I9):DA(J-9) DT(I10):DA(J-10) DC(I11):DG(J-11) DC(I12):DG(J-12) DA(I13):DT(J-13) DG(I14):DC(J-14) DA(I15):DT(J-15) DG(I16):DC(J-16) DG(I17):DC(J-17) DG(I18):DC(J-18) DT(I19):DA(J-19) DC(I20):DG(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DC(I23):DG(J-23) DC(I24):DG(J-24) DC(I25):DG(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DA(I30):DT(J-30) DC(I31):DG(J-31) DC(I32):DG(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DG(I35):DC(J-35) DG(I36):DC(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DA(I45):DT(J-45) DG(I46):DC(J-46) DG(I47):DC(J-47) DT(I48):DA(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DG(I54):DC(J-54) DA(I55):DT(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DC(I62):DG(J-62) DA(I63):DT(J-63) DC(I64):DG(J-64) DA(I65):DT(J-65) DG(I66):DC(J-66) DT(I67):DA(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkte >5f9l_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING DAMPNPP ACROSS A DNA TEMPLATE CONTAINING 1,N2-ETHENODEOXYGUANOSINE LESION organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (321) SER322 0 4 0 0 0 0 0 0 (377) LEU378 0 1 0 0 0 0 0 0 (381) ARG382 0 0 0 0 11 18 0 0 (420) MET421 0 1 0 0 0 0 0 0 (422) PHE423 0 1 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpttvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltMlFlcatkfsas >5f9n_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING DCMPNPP ACROSS A DNA TEMPLATE CONTAINING 1,N2-ETHENODEOXYGUANOSINE LESION organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 3 1 (376) LEU378 0 0 0 0 0 2 5 0 (380) ARG382 0 0 16 10 0 0 0 0 (421) PHE423 0 0 0 0 0 0 2 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >5f9r_B: title=CRYSTAL STRUCTURE OF CATALYTICALLY-ACTIVE STREPTOCOCCUS PYOGENES CRISPR-CAS9 IN COMPLEX WITH SINGLE-GUIDED RNA AND DOUBLE-STRANDED DNA PRIMED FOR TARGET DNA CLEAVAGE organism=Streptococcus pyogenes serotype M1 DNA sequence DT(D21):DA(C10) DG(D22):DC(C9) DG(D23):DC(C8) DC(D24):DG(C7) DG(D25):DC(C6) DA(D26):DT(C5) DT(D27):DA(C4) DT(D28):DA(C3) DA(D29):DT(C2) DG(D30):DC(C1) chainB (1105) LYS1107 2 5 3 0 0 0 0 0 0 0 (1217) GLU1219 0 1 0 0 0 0 0 0 0 0 (1331) ARG1333 13 9 1 0 0 0 0 0 0 0 (1333) ARG1335 0 15 11 2 0 0 0 0 0 0 (1335) THR1337 0 0 0 0 0 1 0 0 0 0 prot.sequence kkysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarenqttqkgqknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdhivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydvrkmiakseqeigkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRyTstkevldatlihqsitglyetridlsq >5fd3_A: title=STRUCTURE OF LIN54 TESMIN DOMAIN BOUND TO DNA organism=Homo sapiens DNA sequence DA(I2):DT(H12) DG(I3):DC(H11) DT(I4):DA(H10) DT(I5):DA(H9) DT(I6):DA(H8) DC(I7):DG(H7) DA(I8):DT(H6) DA(I9):DT(H5) DA(I10):DT(H4) DC(I11):DG(H3) DT(I12):DA(H2) DC(I13):DG(H1) chainA ( 15) TYR536 0 0 1 13 8 2 0 0 0 0 0 0 ( 75) TYR610 0 0 0 0 0 0 2 7 12 1 0 0 prot.sequence rkpcnctkslclklYcdcfangefcnncnctncynnlehenerqkaikacldrnpeafkpkkgcnckrsgclknYcecyeakimcssickcigcknfeesperktlmh >5fdk_ABD:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF RECU(D88N) IN COMPLEX WITH PALINDROMIC DNA DUPLEX organism=Bacillus subtilis DNA sequence DA(F1):DT(E12) DC(F2):DG(E11) DG(F3):DC(E10) DC(F4):DG(E9) DA(F5):DT(E8) DA(F6):DT(E7) DT(F7):DA(E6) DT(F8):DA(E5) DG(F9):DC(E4) DC(F10):DG(E3) DG(F11):DC(E2) DT(F12):DA(E1) chainA ( 92) GLN114 0 0 0 0 0 0 0 1 0 0 0 0 chainB ( 74) ASN107 0 0 0 0 0 1 0 0 0 0 0 0 ( 81) GLN114 0 0 0 0 4 0 0 0 0 0 0 0 chainD ( 68) TYR68 52 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krapsysnrgmtleddlnetnkyyltnqiavihkkptpvqivnvhypkrsaavikeayfkqssttnyngiykgryidfeaketknktsfplQnfhdhqiehmkqvkaqdgicfviisafdqvyfleadklfyfwdrkekngrksirkdeleetaypislgyapridyisiieqlyfs/tleddlnetnkyyltnqiavihkkptpvqivnvhypkrsaavikeayfkqssttnyngiykgryidfeaketkNktsfplQnfhdhqiehmkqvkaqdgicfviisafdqvyfleadklfyfwdrkekngrksirkdeleetaypislgyapridyisiieqlyfs/mirypngktfqpkhsvssqnsqkrapsysnrgmtleddlnetnkyyltnqiavihkkptpvqivnvhYpkrsaavikeayfkqssttnyngiykgryidfeaketknktsfplqnfhdhqiehmkqvkaqdgicfviisafdqvyfleadklfyfwdrkekngrksirkdeleetaypislgyapridyisiieqlyfs >5fdk_D:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF RECU(D88N) IN COMPLEX WITH PALINDROMIC DNA DUPLEX organism=Bacillus subtilis DNA sequence DA(F1):DT(E12) DC(F2):DG(E11) DG(F3):DC(E10) DC(F4):DG(E9) DA(F5):DT(E8) DA(F6):DT(E7) DT(F7):DA(E6) DT(F8):DA(E5) DG(F9):DC(E4) DC(F10):DG(E3) DG(F11):DC(E2) DT(F12):DA(E1) chainD ( 68) TYR68 52 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mirypngktfqpkhsvssqnsqkrapsysnrgmtleddlnetnkyyltnqiavihkkptpvqivnvhYpkrsaavikeayfkqssttnyngiykgryidfeaketknktsfplqnfhdhqiehmkqvkaqdgicfviisafdqvyfleadklfyfwdrkekngrksirkdeleetaypislgyapridyisiieqlyfs >5ff8_A:Uracil-DNA_glycosylase-like; title=TDG ENZYME-PRODUCT COMPLEX organism=Homo sapiens DNA sequence DA(D1):DT(C28) DG(D2):DC(C27) DC(D3):DG(C26) DT(D4):DA(C25) DG(D5):DC(C24) DT(D6):DA(C23) DC(D7):DG(C22) DC(D8):DG(C21) DA(D9):DT(C20) DT(D10):DA(C19) DC(D11):DG(C18) DG(D12):DC(C17) DC(D13):DG(C16) DT(D14):DA(C15) DC(D15):DG(C14) DA(D16):DT(C13) DG(D30):DC(C11) DT(D31):DA(C10) DA(D32):DT(C9) DC(D33):DG(C8) DA(D34):DT(C7) DG(D35):DC(C6) DA(D36):DT(C5) DG(D37):DC(C4) DC(D38):DG(C3) DT(D39):DA(C2) DG(D40):DC(C1) chainA ( 94) SER200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 95) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 (168) ALA274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (169) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 (170) CYS276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (171) ALA277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (172) GLN278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 prot.sequence kvdrfngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARCAQfpraqdkvhyyiklkdlrdqlkgiern >5ffj_B:S-adenosyl-L-methionine-dependent_methyltransferases;P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF A NUCLEASE-DELETION MUTANT OF THE TYPE ISP RESTRICTION- MODIFICATION ENZYME LLAGI IN COMPLEX WITH A DNA SUBSTRATE MIMIC organism=Lactococcus lactis DNA sequence DT(F2):DA(E23) DA(F3):DT(E22) DG(F4):DC(E21) DC(F5):DG(E20) DT(F6):DA(E19) DA(F7):DT(E18) DA(F8):DT(E17) DT(F9):DA(E16) DA(F10):DT(E15) DG(F11):DC(E14) DA(F12):DT(E13) DC(F13):DG(E12) DT(F14):DA(E11) DG(F15):DC(E10) DG(F16):DC(E9) DA(F17):DT(E8) DT(F18):DA(E7) DG(F19):DC(E6) DG(F20):DC(E5) DA(F21):DT(E4) DG(F22):DC(E3) DG(F23):DC(E2) chainB (536) VAL867 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (687) ASN1018 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (690) TYR1021 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 0 0 (692) LYS1023 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 (725) SER1056 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 (727) LEU1058 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 3 0 0 0 0 (787) GLN1118 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 (788) ARG1119 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 (794) SER1125 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (800) LYS1131 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 (802) PHE1133 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 (804) SER1135 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (806) SER1137 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (807) ARG1138 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0 0 0 0 0 0 0 0 (892) ILE1223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (895) VAL1226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (897) ASN1228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 (955) ARG1286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 12 6 0 0 0 (995) GLU1326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (996) ASN1327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 2 0 0 0 (998) ARG1329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 (1036) MET1367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 (1037) HIS1368 0 0 0 0 0 0 0 0 0 0 0 0 0 23 11 0 0 0 0 0 0 0 (1042) GLN1373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 (1044) ARG1375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence lrdyqqtakenalahfkendrgqlimapgtgktftslkisealskdkngpfkvlylvpsiqlltqtlrgwnndteltitsmavtsdrdasasdigypattsskkilqnwhdfeslpkqtdmlvvfstyqsievigeaqkegfpefdfiisdeahrttgahasafskvhsnnnvkglkrmyqtatpkiygsillssmddeskygevffrmgfgqavsrdiltdykvmvrivgiwngmmrrraiaftrtieeskkvssqfeevvneylsmrhnalqkgeildwladpnkpadivsdiptldaviflspkksqvdivqavgrimrkdygyiilpivinnknyetvwqvinalrsvderfeamidklnmakqlkvwnkfegaifgkivqkvgdrkylenwskdvakiaerqinwiknklsdkkdpislefkkfvsslqhnindsidekqaaemlsqhlitkpifealfseysfvnqnpvsqamesivselekagfakeqenleplyesvrmraegiekaedkqkiivtlydkffktafiVftpievvdfivhsvddvlkkhfgkslaskdvhildpftgtgtfivrtltylkeqmdageislsditrkfmkelhaneivllsyyiaainieatfdeingeeegyvpfegivltdtfesteteetldddyfgtnderlkrqqevpitaiigNppYsKgqsnendnnknieyprlfksiadsyvknskttSvLgmydsyvlsirwasnrlndkgvigfvsngsyidsqsadglrkslfkefnhlyifnlrgdQRtqgetSrkeggKiFgSgSRtsiaisilvkddsdnhevhyhdigdyltrddkldilrdkesilnidwenispdenndwinqrdqnylnyrpladengsifsvkdIgiVtNrdawvsnfskinvsdnvqimiknynlevdrlenidvklndktvvdyvtnderkiswsRslkqraarrektqfshsdimlamyrpftkkylyrnrflnENvRktyqtfpdknsknllinisgqgdkadfatliseylsdMHviggQaRnlprftyegrtdnivsddefyyvygvlhssayrkryandlkkdlpripllknkdkyveigrklsdlhlnyenqpiwdgieveisqpdyrvkkmkhpkkgvldtiiynesitikniperayeyvvngrpaiewiidqyqvktdkksgitddpnefsdnpkyilnlllsvitvsmrtlelieelpefeiq >5fhd_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF BACTEROIDES SP PIF1 COMPLEXED WITH TAILED DSDNA RESULTING IN SSDNA BOUND COMPLEX organism=Bacteroides sp. 2_1_16 DNA sequence DT(C3) DT(C4) DT(C5) DT(C6) DT(C7) DC(C8) DC(C9) DG(C10) chainA ( 66) HIS68 0 0 0 4 0 0 0 0 ( 72) PRO74 0 0 0 0 3 0 0 0 ( 73) PHE75 0 0 0 35 14 0 0 0 ( 89) TYR91 0 0 0 0 0 0 34 0 (109) ARG111 0 0 0 1 0 0 0 0 (147) VAL149 0 8 11 0 0 0 0 0 (149) LYS151 0 4 4 0 0 0 0 0 (229) HIS236 4 0 0 0 0 0 0 0 (283) SER290 0 0 0 0 0 0 4 0 (284) LEU291 0 0 0 0 0 0 6 8 (343) HIS361 0 1 0 0 0 0 0 0 (359) HIS377 5 0 0 0 0 0 0 0 (361) PHE379 27 3 0 0 0 0 0 0 (362) CYS380 0 1 0 0 0 0 0 0 prot.sequence dmilteemqkimnliqddennvfvtgkagsgkttflkylieksgkncivaaptgiaainaggvtlHslfgiPFgpitpydrlenkfseYkvelllkmelliideismvRpdildtidrklrwvyesdepfggvqvvmfgdlfqlppVtKkqEreilsdfydgffffnalvfkrtgfhiveltkifrqtepefinvlnnirnyqvtsdeldllselkdrkineyihictHkadvekinadklgeqeirnydivikdkfpessipcdlhlklrvgarvmslvndSLkgyyngmlgivtalednvitvrmdngrtikferytwsnteeigsctqfpltlawaitiHksqgltfdkiiihvsHtFCpgqlyvalsrcrtlegivsdafitkqmiipeyalidferayksegnyygkrl >5fj8_ABE: title=CRYO-EM STRUCTURE OF YEAST RNA POLYMERASE III ELONGATION COMPLEX AT 3. 9 A organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(R1):DT(S18) DG(R3):DC(S16) DT(R4):DA(S15) DC(R5):DG(S14) DA(R6):DT(S13) DA(R7):DT(S12) DG(R8):DC(S11) DT(R9):DA(S10) DA(R10):DT(S9) DC(R11):DG(S8) DT(R12):DA(S7) DT(R13):DA(S6) chainA (1335) ARG1373 0 0 0 0 0 0 0 0 0 0 6 0 chainB chainE prot.sequence kevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqrrclhcgalngvvkkaaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpamlpgssngggkvkpirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavktaetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpsendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalkan/deintaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeksrkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsadapnpnnvnvqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >5flm_ABE: title=STRUCTURE OF TRANSCRIBING MAMMALIAN RNA POLYMERASE II organism=BOS TAURUS DNA sequence DG(N1):DC(T39) DG(N2):DC(T38) DC(N3):DG(T37) DA(N4):DT(T36) DG(N5):DC(T35) DT(N6):DA(T34) DA(N7):DT(T33) DC(N8):DG(T32) DT(N9):DA(T31) DA(N10):DT(T30) DG(N11):DC(T29) DT(N12):DA(T28) DA(N13):DT(T27) DA(N26):DT(T26) DA(N27):DA(T25) DG(N28):DC(T24) DT(N29):DT(T23) DA(N30):DG(T22) DC(N31):DG(T21) DT(N32):DT(T20) DT(N33):DC(T19) DG(N34):DC(T18) DA(N35):DG(T17) DG(N36):DA(T16) DC(N37):DA(T15) DT(N38):DT(T14) DT(N39):DT(T13) chainA (222) MET266 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (417) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (418) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 (810) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 (811) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (1356) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainB (465) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 chainE prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrDgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdgldqtleefkaqfggkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >5flv_I:p53-like_transcription_factors;Homeodomain-like; title=CRYSTAL STRUCTURE OF NKX2-5 AND TBX5 BOUND TO THE NPPA PROMOTER REGION organism=MUS MUSCULUS DNA sequence DC(K5):DG(J19) DC(K6):DG(J18) DA(K7):DT(J17) DC(K8):DG(J16) DT(K9):DA(J15) DT(K10):DA(J14) DC(K11):DG(J13) DA(K12):DT(J12) DA(K13):DT(J11) DA(K14):DT(J10) DG(K15):DC(J9) DG(K16):DC(J8) DT(K17):DA(J7) DG(K18):DC(J6) DT(K19):DA(J5) DG(K20):DC(J4) DA(K21):DT(J3) DG(K22):DC(J2) DA(K23):DT(J1) DA(K24):DT(J0) DG(K25):DC(J-1) chainI ( 2) ARG141 0 0 0 0 0 0 4 9 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE183 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) GLN186 4 10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ASN187 0 0 0 1 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TYR190 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LYS191 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG1081 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 (204) THR1215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (221) PHE1232 0 0 0 0 0 0 0 0 0 1 2 3 0 0 0 0 0 0 0 0 0 (225) PHE1236 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 prot.sequence pRvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYKskrqrvflherelwlkfhevgtemiitkagRrmfpsykvvtglnpktkyillmdivpaddhrykfadnkwsvtgkaepampgrlyvhpdspatgahwmrqlvsfqklkltnnhldpfghiilnsmhkyqprlhivkadsthvfpetafiavTsyqnhkitqlkiennpFakgFr >5fmf_1AMPQUV:TATA-box_binding_protein-like;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;Cyclin-like;Zinc_beta-ribbon;TFB5-like; title=THE P-LOBE OF RNA POLYMERASE II PRE-INITIATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T94):DG(N72) DC(T95):DG(N71) DC(T96):DG(N70) DC(T97):DG(N69) DA(T98):DT(N68) DC(T99):DG(N67) DC(T100):DG(N66) DC(T101):DG(N65) DC(T102):DG(N64) DC(T103):DG(N63) DT(T104):DA(N62) DT(T105):DA(N61) DT(T106):DA(N60) DA(T107):DT(N59) DG(T108):DC(N58) DT(T109):DA(N57) DA(T110):DT(N56) DC(T111):DG(N55) DT(T112):DA(N54) DT(T113):DA(N53) DA(T114):DT(N52) DT(T115):DA(N51) DG(T116):DC(N50) DC(T117):DG(N49) DC(T118):DG(N48) DT(T119):DA(N47) DG(T120):DC(N46) DG(T121):DC(N45) DT(T122):DA(N44) DT(T123):DA(N43) DA(T124):DT(N42) DT(T125):DA(N41) DA(T126):DT(N40) DG(T127):DC(N39) DA(T128):DT(N38) DT(T129):DA(N37) DA(T130):DT(N36) DC(T131):DG(N35) DA(T132):DT(N34) DT(T133):DA(N33) DT(T134):DA(N32) DG(T135):DC(N31) DA(T136):DT(N30) DA(T137):DT(N29) DA(T138):DT(N28) DC(T139):DG(N27) DC(T140):DG(N26) DC(T141):DG(N25) DC(T142):DG(N24) DT(T143):DA(N23) DT(T144):DA(N22) DT(T145):DA(N21) DT(T146):DA(N20) DA(T147):DT(N19) DA(T149):DT(N17) DG(T150):DC(N16) DG(T151):DC(N15) DC(T152):DG(N14) DG(T153):DC(N13) DC(T154):DG(N12) DC(T155):DG(N11) DT(T156):DA(N10) DT(T157):DA(N9) DT(T158):DA(N8) DT(T159):DA(N7) DT(T160):DA(N6) DT(T161):DA(N5) DT(T162):DA(N4) DT(T163):DA(N3) DT(T164):DA(N2) DT(T165):DA(N1) chain1 (166) MET459 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (473) ARG785 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (193) ASP195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 22 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM chainP chainQ ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ALA101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ILE103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU chainV (106) SER291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ILE292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) MET294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) PRO295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) ARG323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 34 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence saviggdnereeedddidavhsfeianesvevvkkrcqeidypvleeydfrndhrnpdldidlkpstqirpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflqwctlqpencavftsdnkemfqtesglvvstysMvantrnrshdsqkvmdfltgrewgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeaianvqcaevwcpmtaefyqeylretarkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpqqermnilqnfqyndqintiflskvgdtsidlpeatcliqisshygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmenpnlayasprerrellqevlagievdadnsvgR/gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdaDepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/snaeasrvyeiivesvvnevredfenagideqtlqdlkniwqkkltetkvttfswdnqfndylisedgpdenlmlclydkvtrtkarwkcslkdgvvtinrndytfqkaqveaewv/nlnivltcpeckvyppkiverfsegdvvcalcglvlsdklvdtrsewrtfeasnplldgnnlstrigkgettdmrftkelnkaqgknvmdkkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktkefgktlnimkngflkidtdnmSrfcshlglpmqvttsaeytakkckeikeiagkspitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdpqliangvvsldnlp/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFAAvImrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLifvsgkivlTgakqreeiyqafeaiypvlsefrkm/dpneynefPlRapkedlerthllkfqskkkinpvthlpVRLhRkdtrnlqfqlAdVagnlrRkTrqlkvlenakklrfefypwvmedfdgyntwvgsyEaGnsdsyvllsveddgsftmipadkvykftARnkyatltideaekRmdkks/eesldldlersnrqvwlvrlpmflaekwrdrnnlhgqelgkirinkdgskitlllnendndsipheydleltkkvveneyvfteqnlkktaivgtvchecqvmpsSIrMPkkeildylfklfdeydywslkglkertRqpeahlkecldkvatlvkkgpyafkytlrpeykklk >5fmf_V:Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=THE P-LOBE OF RNA POLYMERASE II PRE-INITIATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T94):DG(N72) DC(T95):DG(N71) DC(T96):DG(N70) DC(T97):DG(N69) DA(T98):DT(N68) DC(T99):DG(N67) DC(T100):DG(N66) DC(T101):DG(N65) DC(T102):DG(N64) DC(T103):DG(N63) DT(T104):DA(N62) DT(T105):DA(N61) DT(T106):DA(N60) DA(T107):DT(N59) DG(T108):DC(N58) DT(T109):DA(N57) DA(T110):DT(N56) DC(T111):DG(N55) DT(T112):DA(N54) DT(T113):DA(N53) DA(T114):DT(N52) DT(T115):DA(N51) DG(T116):DC(N50) DC(T117):DG(N49) DC(T118):DG(N48) DT(T119):DA(N47) DG(T120):DC(N46) DG(T121):DC(N45) DT(T122):DA(N44) DT(T123):DA(N43) DA(T124):DT(N42) DT(T125):DA(N41) DA(T126):DT(N40) DG(T127):DC(N39) DA(T128):DT(N38) DT(T129):DA(N37) DA(T130):DT(N36) DC(T131):DG(N35) DA(T132):DT(N34) DT(T133):DA(N33) DT(T134):DA(N32) DG(T135):DC(N31) DA(T136):DT(N30) DA(T137):DT(N29) DA(T138):DT(N28) DC(T139):DG(N27) DC(T140):DG(N26) DC(T141):DG(N25) DC(T142):DG(N24) DT(T143):DA(N23) DT(T144):DA(N22) DT(T145):DA(N21) DT(T146):DA(N20) DA(T147):DT(N19) DA(T149):DT(N17) DG(T150):DC(N16) DG(T151):DC(N15) DC(T152):DG(N14) DG(T153):DC(N13) DC(T154):DG(N12) DC(T155):DG(N11) DT(T156):DA(N10) DT(T157):DA(N9) DT(T158):DA(N8) DT(T159):DA(N7) DT(T160):DA(N6) DT(T161):DA(N5) DT(T162):DA(N4) DT(T163):DA(N3) DT(T164):DA(N2) DT(T165):DA(N1) chainV (106) SER291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ILE292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) MET294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) PRO295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) ARG323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 34 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eesldldlersnrqvwlvrlpmflaekwrdrnnlhgqelgkirinkdgskitlllnendndsipheydleltkkvveneyvfteqnlkktaivgtvchecqvmpsSIrMPkkeildylfklfdeydywslkglkertRqpeahlkecldkvatlvkkgpyafkytlrpeykklk >5fmp_AB:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=KSTR, TRANSCRIPTIONAL REPRESSOR OF CHOLESTEROL DEGRADATION IN MYCOBACTERIUM TUBERCULOSIS, BOUND TO THE DNA OPERATOR organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DC(C1):DG(D16) DT(C2):DA(D15) DA(C3):DT(D14) DG(C4):DC(D13) DA(C5):DT(D12) DA(C6):DT(D11) DC(C7):DG(D10) DG(C8):DC(D9) DT(C9):DA(D8) DG(C10):DC(D7) DT(C11):DA(D6) DT(C12):DA(D5) DC(C13):DG(D4) DT(C14):DA(D3) DA(C15):DT(D2) DA(C16):DT(D1) chainA ( 30) MET60 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 31) ARG61 0 0 0 0 0 6 11 8 0 0 0 0 0 0 0 0 ( 40) ALA70 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) VAL71 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 ( 43) THR73 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) TYR75 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 chainB ( 29) MET60 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 30) ARG61 0 0 0 0 0 0 0 0 10 11 6 0 0 0 0 0 ( 39) ALA70 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 ( 40) VAL71 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 42) THR73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 44) TYR75 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 prot.sequence gseaqrerrkrildatmaiaskggyeavqMRavadradvAVgTlYryfpskvhllvsalgrefsridaktdrsavagatpfqrlnfmvgklnramqrnpllteamtrayvfadasaasevdqveklidsmfaramangeptedqyhiarvisdvwlsnllawltrrasatdvskrldlavrlli/seaqrerrkrildatmaiaskggyeavqMRavadradvAVgTlYryfpskvhllvsalgrefsridaktdrsavagatpfqrlnfmvgklnramqrnpllteamtrayvfadasaasevdqveklidsmfaramangeptedqyhiarvisdvwlsnllawltrrasatdvskrldlavrlli >5fmp_B:Homeodomain-like; title=KSTR, TRANSCRIPTIONAL REPRESSOR OF CHOLESTEROL DEGRADATION IN MYCOBACTERIUM TUBERCULOSIS, BOUND TO THE DNA OPERATOR organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DC(C1):DG(D16) DT(C2):DA(D15) DA(C3):DT(D14) DG(C4):DC(D13) DA(C5):DT(D12) DA(C6):DT(D11) DC(C7):DG(D10) DG(C8):DC(D9) DT(C9):DA(D8) DG(C10):DC(D7) DT(C11):DA(D6) DT(C12):DA(D5) DC(C13):DG(D4) DT(C14):DA(D3) DA(C15):DT(D2) DA(C16):DT(D1) chainB ( 29) MET60 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 30) ARG61 0 0 0 0 0 0 0 0 10 11 6 0 0 0 0 0 ( 39) ALA70 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 ( 40) VAL71 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 42) THR73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 44) TYR75 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 prot.sequence seaqrerrkrildatmaiaskggyeavqMRavadradvAVgTlYryfpskvhllvsalgrefsridaktdrsavagatpfqrlnfmvgklnramqrnpllteamtrayvfadasaasevdqveklidsmfaramangeptedqyhiarvisdvwlsnllawltrrasatdvskrldlavrlli >5frm_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI XZ384 (COMPOUND 4A) organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (104) ILE112 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ARG114 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) GLN215 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) ARG222 3 8 12 7 0 0 0 0 0 0 0 0 0 0 0 0 (251) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence daeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >5frn_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI XZ419 (COMPOUND 4C) organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (104) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (106) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (207) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 (213) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (214) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 7 12 8 3 (251) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence daeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >5fro_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI XZ446 (COMPOUND 4F) organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (104) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (106) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (207) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (213) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (214) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 7 12 8 3 (251) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence daeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >5fur_ACGI: title=STRUCTURE OF HUMAN TFIID-IIA BOUND TO CORE PROMOTER DNA organism=HOMO SAPIENS DNA sequence DA(E1):DT(F160) DG(E2):DC(F159) DG(E3):DC(F158) DG(E4):DC(F157) DC(E5):DG(F156) DG(E6):DC(F155) DC(E7):DG(F154) DC(E8):DG(F153) DT(E9):DA(F152) DA(E10):DT(F151) DT(E11):DA(F150) DA(E12):DT(F149) DA(E13):DT(F148) DA(E14):DT(F147) DA(E15):DT(F146) DG(E16):DC(F145) DG(E17):DC(F144) DG(E18):DC(F143) DG(E19):DC(F142) DG(E20):DC(F141) DT(E21):DA(F140) DG(E22):DC(F139) DG(E23):DC(F138) DG(E24):DC(F137) DG(E25):DC(F136) DG(E26):DC(F135) DC(E27):DG(F134) DG(E28):DC(F133) DC(E29):DG(F132) DG(E30):DC(F131) DT(E31):DA(F130) DT(E32):DA(F129) DC(E33):DG(F128) DG(E34):DC(F127) DT(E35):DA(F126) DC(E36):DG(F125) DC(E37):DG(F124) DT(E38):DA(F123) DC(E39):DG(F122) DA(E40):DT(F121) DG(E41):DC(F120) DT(E42):DA(F119) DC(E43):DG(F118) DG(E44):DC(F117) DC(E45):DG(F116) DG(E46):DC(F115) DA(E47):DT(F114) DT(E48):DA(F113) DC(E49):DG(F112) DG(E50):DC(F111) DA(E51):DT(F110) DA(E52):DT(F109) DC(E53):DG(F108) DA(E54):DT(F107) DC(E55):DG(F106) DT(E56):DA(F105) DC(E57):DG(F104) DG(E58):DC(F103) DA(E59):DT(F102) DG(E60):DC(F101) DC(E61):DG(F100) DC(E62):DG(F99) DG(E63):DC(F98) DA(E64):DT(F97) DG(E65):DC(F96) DC(E66):DG(F95) DA(E67):DT(F94) DG(E68):DC(F93) DA(E69):DT(F92) DC(E70):DG(F91) DG(E71):DC(F90) DT(E72):DA(F89) DG(E73):DC(F88) DC(E74):DG(F87) DC(E75):DG(F86) DT(E76):DA(F85) DA(E77):DT(F84) DC(E78):DG(F83) DG(E79):DC(F82) DG(E80):DC(F81) chainA ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 15 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainG (253) SER861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) LYS865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ARG875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 chainI prot.sequence sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFAavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrkt/dtenvvvcQyDkihrsknkwkfhlkdgimnlngrdyifSKaigdaew/iiqhsipavelrqpffpthmgpiklrqfhrpplkkysfgalsqpgphsvqpllkhikkkakmreqerqasgggemffmrtpqdltgkdgdlilaeyseengplmmqvgmatkiknyykrkpgkdpgapdckygetvychtspflgslhpgqllqafennlfrapiylhkmpetdfliirtrqgyyirelvdifvvgqqcplfevpgpnskranthirdflqvfiyrlfwkskdrprrirmedikkafpshseSsiRKrlklcadfkRtgmdsnwwvlksdfrlpteeeiramvspeqccayysmiaaeqrlkdagygeksfkiddevrtapwnttrafiaamkgkcllevtgvadptgcgegfsyvkipnksvaehqerykeecqrifdlqnkvlsstevldtd/klthqvvcinninfqrksvvgfveltifptvanlnriklnskqcriyrvrindleaafiynelcikvpselwkhvdelkvlkihinfsldqpkgglhfvvpsvegsmaergahvfscgyqnstrfwfpcvdsyselctwkleftvdaamvavsngdlvetvythdmrkktfhymltiptaasnislaigpfeilvdpymhevthfclpqllpllkhttsylhevfefyeeiltcrypyscfktvfideayveVaaYAsmsifstnlLhsamiidetpltrrclaqslaqqffgcfisrmswsdewvlkgisgyiyglwmkktfgvneyrhwikeeldkivayelktggvllhpifgggkekdnpashlhfsikhphtlsweyysmfqckahlvmrlienrismefmlqvfnkllslastassqkfqshmwsqmlvstsgflksisnvsgkdiqplikqwvdqsgvvkfygsfafnrkrnvleleikqdytspgtqkyvgplkvtvqeldgsfnhtlqieenslkhdipchsksrrnkkkkiplmngeevdmdlsamdadspllwiridpdmsvlrkvefeqadfmwqyqlryerdvvaqqesilalekfptpasrlaltdileqeqcfyrvrmsacfclakiansmvstwtgppamkslftrmfcckscpnivktnnfmsfqsyflqktmpvamallrdvhnlcpkevltfildlikyndnrknkfsdnyyraemidalansvtpavsvnnevrtldnlnpdvrlileeitrflnmekllpsyrhtitvsclrairvlqknghvpsdpalfksyaeyghfvdiriaaleavvdytkvdrsyeelqwllnmiqndpvpyvrhkilnmltknppftknmesplcnealvdqlwklmnsgtshdwrlrcgavdly >5fur_G: title=STRUCTURE OF HUMAN TFIID-IIA BOUND TO CORE PROMOTER DNA organism=HOMO SAPIENS DNA sequence DC(F81):DG(E80) DC(F82):DG(E79) DG(F83):DC(E78) DT(F84):DA(E77) DA(F85):DT(E76) DG(F86):DC(E75) DG(F87):DC(E74) DC(F88):DG(E73) DA(F89):DT(E72) DC(F90):DG(E71) DG(F91):DC(E70) DT(F92):DA(E69) DC(F93):DG(E68) DT(F94):DA(E67) DG(F95):DC(E66) DC(F96):DG(E65) DT(F97):DA(E64) DC(F98):DG(E63) DG(F99):DC(E62) DG(F100):DC(E61) DC(F101):DG(E60) DT(F102):DA(E59) DC(F103):DG(E58) DG(F104):DC(E57) DA(F105):DT(E56) DG(F106):DC(E55) DT(F107):DA(E54) DG(F108):DC(E53) DT(F109):DA(E52) DT(F110):DA(E51) DC(F111):DG(E50) DG(F112):DC(E49) DA(F113):DT(E48) DT(F114):DA(E47) DC(F115):DG(E46) DG(F116):DC(E45) DC(F117):DG(E44) DG(F118):DC(E43) DA(F119):DT(E42) DC(F120):DG(E41) DT(F121):DA(E40) DG(F122):DC(E39) DA(F123):DT(E38) DG(F124):DC(E37) DG(F125):DC(E36) DA(F126):DT(E35) DC(F127):DG(E34) DG(F128):DC(E33) DA(F129):DT(E32) DA(F130):DT(E31) DC(F131):DG(E30) DG(F132):DC(E29) DC(F133):DG(E28) DG(F134):DC(E27) DC(F135):DG(E26) DC(F136):DG(E25) DC(F137):DG(E24) DC(F138):DG(E23) DC(F139):DG(E22) DA(F140):DT(E21) DC(F141):DG(E20) DC(F142):DG(E19) DC(F143):DG(E18) DC(F144):DG(E17) DC(F145):DG(E16) DT(F146):DA(E15) DT(F147):DA(E14) DT(F148):DA(E13) DT(F149):DA(E12) DA(F150):DT(E11) DT(F151):DA(E10) DA(F152):DT(E9) DG(F153):DC(E8) DG(F154):DC(E7) DC(F155):DG(E6) DG(F156):DC(E5) DC(F157):DG(E4) DC(F158):DG(E3) DC(F159):DG(E2) DT(F160):DA(E1) chainG (253) SER861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG864 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) LYS865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ARG875 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iiqhsipavelrqpffpthmgpiklrqfhrpplkkysfgalsqpgphsvqpllkhikkkakmreqerqasgggemffmrtpqdltgkdgdlilaeyseengplmmqvgmatkiknyykrkpgkdpgapdckygetvychtspflgslhpgqllqafennlfrapiylhkmpetdfliirtrqgyyirelvdifvvgqqcplfevpgpnskranthirdflqvfiyrlfwkskdrprrirmedikkafpshseSsiRKrlklcadfkRtgmdsnwwvlksdfrlpteeeiramvspeqccayysmiaaeqrlkdagygeksfkiddevrtapwnttrafiaamkgkcllevtgvadptgcgegfsyvkipnksvaehqerykeecqrifdlqnkvlsstevldtd >5fw1_B: title=CRYSTAL STRUCTURE OF SPYCAS9 VARIANT VQR BOUND TO SGRNA AND TGAG PAM TARGET DNA organism=STREPTOCOCCUS PYOGENES DNA sequence DT(D5):DA(C8) DG(D6):DC(C7) DA(D7):DT(C6) DG(D8):DC(C5) DA(D9):DT(C4) DT(D10):DA(C3) DT(D11):DA(C2) DG(D12):DC(C1) chainB (1058) LYS1107 2 5 0 0 0 0 0 0 (1170) GLU1219 0 1 2 0 0 0 0 0 (1273) ARG1333 17 13 5 0 0 0 0 0 (1275) GLN1335 0 3 10 0 0 0 0 0 (1277) ARG1337 0 0 17 14 4 0 0 0 prot.sequence kysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdsvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarnsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdgkatakyffysnimnffkteikrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfvsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylasheqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkQyRstkevldatlihqsitglyetridlsq >5fw2_B: title=CRYSTAL STRUCTURE OF SPCAS9 VARIANT EQR BOUND TO SGRNA AND TGAG PAM TARGET DNA organism=STREPTOCOCCUS PYOGENES DNA sequence DC(C1):DG(D12) DA(C2):DT(D11) DA(C3):DT(D10) DT(C4):DA(D9) DC(C5):DG(D8) DT(C6):DA(D7) DC(C7):DG(D6) DA(C8):DT(D5) chainB (1068) LYS1107 0 0 0 0 0 0 2 5 (1180) GLU1219 0 0 0 0 0 0 3 0 (1284) ARG1333 0 0 0 0 0 5 13 16 (1286) GLN1335 0 0 0 0 0 8 5 0 (1288) ARG1337 0 0 0 4 14 16 0 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdgkatakyffysnimnffkteitkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfesptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkQyRstkevldatlihqsitglyetridlsql >5fw3_B: title=CRYSTAL STRUCTURE OF SPCAS9 VARIANT VRER BOUND TO SGRNA AND TGCG PAM TARGET DNA organism=STREPTOCOCCUS PYOGENES DNA sequence DT(D5):DA(C8) DG(D6):DC(C7) DC(D7):DG(C6) DG(D8):DC(C5) DA(D9):DC(C4) DT(D10):DA(C3) DT(D11):DA(C2) DG(D12):DC(C1) chainB (1074) LYS1107 2 5 0 0 0 0 0 0 (1186) GLU1219 0 2 1 0 0 0 0 0 (1290) ARG1333 13 13 4 0 0 0 0 0 (1292) GLU1335 0 2 5 0 0 0 0 0 (1294) ARG1337 0 0 16 11 4 0 0 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarensrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdeigkatakyffysnimnffkteitlaeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfvsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasarElqkgnelalpskyvnflylashneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkEyRstkevldatlihqsitglyetridlsql >5fyw_ABMORU:Cyclin-like;Zinc_beta-ribbon;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain; title=TRANSCRIPTION INITIATION COMPLEX STRUCTURES ELUCIDATE DNA OPENING (OC) organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(T2):DC(N71) DC(T3):DG(N70) DG(T4):DC(N69) DC(T5):DG(N68) DA(T6):DT(N67) DG(T7):DC(N66) DT(T8):DA(N65) DT(T9):DA(N64) DG(T10):DC(N63) DT(T11):DA(N62) DG(T12):DC(N61) DC(T13):DG(N60) DT(T14):DA(N42) DA(T15):DC(N41) DT(T33):DA(N40) DA(T34):DT(N39) DC(T35):DG(N38) DA(T36):DT(N37) DA(T37):DT(N36) DC(T38):DG(N35) DA(T39):DT(N34) DC(T40):DG(N33) DA(T41):DT(N32) DC(T42):DG(N31) DT(T43):DA(N30) DA(T44):DT(N29) DT(T45):DA(N28) DT(T46):DA(N27) DA(T47):DT(N26) DT(T48):DA(N25) DA(T49):DT(N24) DT(T50):DA(N23) DA(T51):DT(N22) DC(T52):DG(N21) DA(T53):DT(N20) DC(T54):DG(N19) DA(T55):DT(N18) DG(T56):DC(N17) DC(T57):DG(N16) DG(T58):DC(N15) DT(T59):DA(N14) DG(T60):DC(N13) DC(T61):DG(N12) DT(T62):DA(N11) DA(T63):DT(N10) DC(T64):DG(N9) DT(T65):DA(N8) chainA (812) ALA832 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (479) GLN531 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM (121) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR (162) ALA327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpsrggcgntqptirkdglklvgswkkpelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvk/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyelkyelaeesegkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveeahdfnmklainaktitsglkyalatgnwgssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegQacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqddveeytwssllneglveyidaeeeesiliamqpedlepaevdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpispdeeelgqrtayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrd/pnlnivltcpeckvyppkiverfsegdvvcalcglvlsdklvdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktKefgktlnimknilrgksqnltyiprfcshlglpmqvttsaeytakkckeikeiagkspitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdp/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLifvsgkiVlTgakqreeiyqafeaiypvlsefrkm/dldlersnrqvwlvrlpmflaekwrlgkirinkskitlllnepheydleltkkvveneyvfteqtipkktaivgtvchecqvmpyhkiveqrrnivkerittldetvgvtmshtgmsmrsdnsnflkvmpkkeildylfklfdeydywslkglkertrqpeAhlkecldkvatlvkkgpyafkytlrkeeerkatlgel/snaeasrvyeiivesvvnevredfenagideqtlqdlkniwqkkltenlmlclydkvtrtkarwkcslkdgvvtinrndytfqkaqveaewv >5fyw_M:Cyclin-like;Zinc_beta-ribbon; title=TRANSCRIPTION INITIATION COMPLEX STRUCTURES ELUCIDATE DNA OPENING (OC) organism=? DNA sequence DG(T2):DC(N71) DC(T3):DG(N70) DG(T4):DC(N69) DC(T5):DG(N68) DA(T6):DT(N67) DG(T7):DC(N66) DT(T8):DA(N65) DT(T9):DA(N64) DG(T10):DC(N63) DT(T11):DA(N62) DG(T12):DC(N61) DC(T13):DG(N60) DT(T14):DA(N42) DA(T15):DC(N41) DT(T33):DA(N40) DA(T34):DT(N39) DC(T35):DG(N38) DA(T36):DT(N37) DA(T37):DT(N36) DC(T38):DG(N35) DA(T39):DT(N34) DC(T40):DG(N33) DA(T41):DT(N32) DC(T42):DG(N31) DT(T43):DA(N30) DA(T44):DT(N29) DT(T45):DA(N28) DT(T46):DA(N27) DA(T47):DT(N26) DT(T48):DA(N25) DA(T49):DT(N24) DT(T50):DA(N23) DA(T51):DT(N22) DC(T52):DG(N21) DA(T53):DT(N20) DC(T54):DG(N19) DA(T55):DT(N18) DG(T56):DC(N17) DC(T57):DG(N16) DG(T58):DC(N15) DT(T59):DA(N14) DG(T60):DC(N13) DC(T61):DG(N12) DT(T62):DA(N11) DA(T63):DT(N10) DC(T64):DG(N9) DT(T65):DA(N8) chainM (121) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pnlnivltcpeckvyppkiverfsegdvvcalcglvlsdklvdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktKefgktlnimknilrgksqnltyiprfcshlglpmqvttsaeytakkckeikeiagkspitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdp >5fz5_AMORUW:Cyclin-like;Zinc_beta-ribbon;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain; title=TRANSCRIPTION INITIATION COMPLEX STRUCTURES ELUCIDATE DNA OPENING (CC) organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N5):DT(T81) DA(N6):DT(T80) DC(N7):DG(T79) DA(N8):DT(T78) DG(N9):DC(T77) DT(N10):DA(T76) DA(N11):DT(T75) DG(N12):DC(T74) DC(N13):DG(T73) DA(N14):DT(T72) DC(N15):DG(T71) DG(N16):DC(T70) DC(N17):DG(T69) DT(N18):DA(T68) DG(N19):DC(T67) DT(N20):DA(T66) DG(N21):DC(T65) DT(N22):DA(T64) DA(N23):DT(T63) DT(N24):DA(T62) DA(N25):DT(T61) DT(N26):DA(T60) DA(N27):DT(T59) DA(N28):DT(T58) DT(N29):DA(T57) DA(N30):DT(T56) DG(N31):DC(T55) DC(N32):DG(T54) DT(N33):DA(T53) DA(N34):DT(T52) DT(N35):DA(T51) DG(N36):DC(T50) DG(N37):DC(T49) DA(N38):DT(T48) DA(N39):DT(T47) DC(N40):DG(T46) DG(N41):DC(T45) DT(N42):DA(T44) DT(N43):DA(T43) DC(N44):DG(T42) DG(N45):DC(T41) DA(N46):DT(T40) DT(N47):DA(T39) DT(N48):DA(T38) DC(N49):DG(T37) DA(N50):DT(T36) DC(N51):DG(T35) DC(N52):DG(T34) DT(N53):DA(T33) DC(N54):DG(T32) DC(N55):DG(T31) DG(N56):DC(T30) DA(N57):DT(T29) DT(N58):DA(T28) DG(N59):DC(T27) DT(N60):DA(T26) chainA chainM (121) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR chainU chainW ( 75) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpsrggcgntqptirkdglklvgswkkpelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvk/pnlnivltcpeckvyppkiverfsegdvvcalcglvlsdklvdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktKefgktlnimknilrgksqnltyiprfcshlglpmqvttsaeytakkckeikeiagkspitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdp/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFpgliyrmvkpkivlLifvsgkivlTgakqreeiyqafeaiypvlsefrkm/dldlersnRqVwlvrlpmflaekwrlgkirinkskitlLlnepheydleltkkVvEneyvfTeQtipkktaivgtvchecqvmpyhkiveqrrnivkeRiTtldetvgvtmshtgmsmrsdnsnflkvmPkkeildylfklfdeYdywslkglkErtrqpeahlkecldkvatlvkkgpyafkytlrkeeerkatlgel/snaeasrvYeIivesvvnevredfenagideqtlqdlkNiwqkkltenlmlclYdKvtrtkArWkcslkdgvvtinrndytfqkaqveaewv/ddivknllkfvvrgfyggsfvlvldailfhsvlaeddlkqllsinktelgpliarlrsdrlisihkqreyppnsKsvervyyyvkyphaidaikwkvhqvvqrlkdgymcpicltkytqleavqllnfdrteflcslcdeplvekqdklnrlmdqiqpiidslkkidd >5fz5_W:Zinc_beta-ribbon; title=TRANSCRIPTION INITIATION COMPLEX STRUCTURES ELUCIDATE DNA OPENING (CC) organism=? DNA sequence DA(N5):DT(T81) DA(N6):DT(T80) DC(N7):DG(T79) DA(N8):DT(T78) DG(N9):DC(T77) DT(N10):DA(T76) DA(N11):DT(T75) DG(N12):DC(T74) DC(N13):DG(T73) DA(N14):DT(T72) DC(N15):DG(T71) DG(N16):DC(T70) DC(N17):DG(T69) DT(N18):DA(T68) DG(N19):DC(T67) DT(N20):DA(T66) DG(N21):DC(T65) DT(N22):DA(T64) DA(N23):DT(T63) DT(N24):DA(T62) DA(N25):DT(T61) DT(N26):DA(T60) DA(N27):DT(T59) DA(N28):DT(T58) DT(N29):DA(T57) DA(N30):DT(T56) DG(N31):DC(T55) DC(N32):DG(T54) DT(N33):DA(T53) DA(N34):DT(T52) DT(N35):DA(T51) DG(N36):DC(T50) DG(N37):DC(T49) DA(N38):DT(T48) DA(N39):DT(T47) DC(N40):DG(T46) DG(N41):DC(T45) DT(N42):DA(T44) DT(N43):DA(T43) DC(N44):DG(T42) DG(N45):DC(T41) DA(N46):DT(T40) DT(N47):DA(T39) DT(N48):DA(T38) DC(N49):DG(T37) DA(N50):DT(T36) DC(N51):DG(T35) DC(N52):DG(T34) DT(N53):DA(T33) DC(N54):DG(T32) DC(N55):DG(T31) DG(N56):DC(T30) DA(N57):DT(T29) DT(N58):DA(T28) DG(N59):DC(T27) DT(N60):DA(T26) chainW ( 75) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ddivknllkfvvrgfyggsfvlvldailfhsvlaeddlkqllsinktelgpliarlrsdrlisihkqreyppnsKsvervyyyvkyphaidaikwkvhqvvqrlkdgymcpicltkytqleavqllnfdrteflcslcdeplvekqdklnrlmdqiqpiidslkkidd >5g32_A:Putative_DNA-binding_domain; title=STRUCTURE OF RAD14 IN COMPLEX WITH ACETYLAMINOPHENYL-GUANINE CONTAINING DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(D2):DA(C14) DG(D3):DC(C13) DA(D4):DT(C12) DT(D5):DA(C11) DG(D6):DC(C10) DA(D7):DT(C9) DC(D8):DC(C7) DG(D9):DA(C6) DT(D10):DT(C5) DA(D11):DC(C4) DG(D12):DT(C3) DA(D13):DC(C2) DG(D14):DG(C1) chainA ( 43) THR230 0 0 0 0 0 0 0 0 0 0 3 0 2 ( 44) GLU231 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 47) GLU234 0 0 0 0 0 0 0 0 0 0 0 0 12 ( 53) ASP240 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 69) ASN256 0 0 0 0 0 0 0 0 0 0 0 7 1 ( 71) HIS258 0 0 0 0 0 0 0 0 0 0 0 16 0 ( 75) PHE262 0 0 0 0 0 0 0 0 0 0 0 0 44 prot.sequence apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTEcKEdyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahr >5g32_AB:Putative_DNA-binding_domain; title=STRUCTURE OF RAD14 IN COMPLEX WITH ACETYLAMINOPHENYL-GUANINE CONTAINING DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(D2):DA(C14) DG(D3):DC(C13) DA(D4):DT(C12) DT(D5):DA(C11) DG(D6):DC(C10) DA(D7):DT(C9) DC(D8):DC(C7) DG(D9):DA(C6) DT(D10):DT(C5) DA(D11):DC(C4) DG(D12):DT(C3) DA(D13):DC(C2) DG(D14):DG(C1) chainA ( 43) THR230 0 0 0 0 0 0 0 0 0 0 3 0 2 ( 44) GLU231 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 47) GLU234 0 0 0 0 0 0 0 0 0 0 0 0 12 ( 53) ASP240 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 69) ASN256 0 0 0 0 0 0 0 0 0 0 0 7 1 ( 71) HIS258 0 0 0 0 0 0 0 0 0 0 0 16 0 ( 75) PHE262 0 0 0 0 0 0 0 0 0 0 0 0 44 chainB ( 43) THR230 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 53) ASP240 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 69) ASN256 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS258 24 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) PHE262 46 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTEcKEdyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahr/apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTeckedyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahrr >5g33_A:Putative_DNA-binding_domain; title=STRUCTURE OF RAD14 IN COMPLEX WITH ACETYLNAPHTYL-GUANINE CONTAINING DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(D2):DA(C14) DG(D3):DC(C13) DA(D4):DT(C12) DT(D5):DA(C11) DG(D6):DC(C10) DA(D7):DT(C9) DC(D8):DC(C7) DG(D9):DA(C6) DT(D10):DT(C5) DA(D11):DC(C4) DG(D12):DT(C3) DA(D13):DC(C2) DG(D14):DG(C1) chainA ( 43) THR230 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 44) GLU231 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 47) GLU234 0 0 0 0 0 0 0 0 0 0 0 0 11 ( 53) ASP240 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 69) ASN256 0 0 0 0 0 0 0 0 0 0 0 8 1 ( 71) HIS258 0 0 0 0 0 0 0 0 0 0 0 14 0 ( 75) PHE262 0 0 0 0 0 0 0 0 0 0 0 0 45 prot.sequence apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTEckEdyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahr >5g33_AB:Putative_DNA-binding_domain; title=STRUCTURE OF RAD14 IN COMPLEX WITH ACETYLNAPHTYL-GUANINE CONTAINING DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(D2):DA(C14) DG(D3):DC(C13) DA(D4):DT(C12) DT(D5):DA(C11) DG(D6):DC(C10) DA(D7):DT(C9) DC(D8):DC(C7) DG(D9):DA(C6) DT(D10):DT(C5) DA(D11):DC(C4) DG(D12):DT(C3) DA(D13):DC(C2) DG(D14):DG(C1) chainA ( 43) THR230 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 44) GLU231 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 47) GLU234 0 0 0 0 0 0 0 0 0 0 0 0 11 ( 53) ASP240 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 69) ASN256 0 0 0 0 0 0 0 0 0 0 0 8 1 ( 71) HIS258 0 0 0 0 0 0 0 0 0 0 0 14 0 ( 75) PHE262 0 0 0 0 0 0 0 0 0 0 0 0 45 chainB ( 43) THR230 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 53) ASP240 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 69) ASN256 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS258 18 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) PHE262 45 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTEckEdyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahr/apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTeckedyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahrr >5g34_AB:Putative_DNA-binding_domain; title=STRUCTURE OF RAD14 IN COMPLEX WITH ACETYLAMINOANTHRACENE-C8-GUANINE CONTAINING DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(D2):DA(C14) DG(D3):DC(C13) DA(D4):DT(C12) DT(D5):DA(C11) DG(D6):DC(C10) DA(D7):DT(C9) DC(D8):DC(C7) DG(D9):DA(C6) DT(D10):DT(C5) DA(D11):DC(C4) DG(D12):DT(C3) DA(D13):DC(C2) DG(D14):DG(C1) chainA ( 43) THR230 0 0 0 0 0 0 0 0 0 0 3 0 2 ( 44) GLU231 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 46) LYS233 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 47) GLU234 0 0 0 0 0 0 0 0 0 0 0 0 11 ( 53) ASP240 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 69) ASN256 0 0 0 0 0 0 0 0 0 0 0 8 1 ( 71) HIS258 0 0 0 0 0 0 0 0 0 0 0 22 0 ( 75) PHE262 0 0 0 0 0 0 0 0 0 0 0 0 46 chainB ( 43) THR230 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 53) ASP240 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 69) ASN256 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS258 22 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) PHE262 44 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTEcKEdyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahr/apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTeckedyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahr >5g34_B:Putative_DNA-binding_domain; title=STRUCTURE OF RAD14 IN COMPLEX WITH ACETYLAMINOANTHRACENE-C8-GUANINE CONTAINING DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(D2):DA(C14) DG(D3):DC(C13) DA(D4):DT(C12) DT(D5):DA(C11) DG(D6):DC(C10) DA(D7):DT(C9) DC(D8):DC(C7) DG(D9):DA(C6) DT(D10):DT(C5) DA(D11):DC(C4) DG(D12):DT(C3) DA(D13):DC(C2) DG(D14):DG(C1) chainB ( 43) THR230 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 53) ASP240 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 69) ASN256 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS258 22 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) PHE262 44 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTeckedyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahr >5g5t_A:Ribonuclease_H-like;PAZ_domain; title=STRUCTURE OF THE ARGONAUTE PROTEIN FROM METHANOCALDCOCCUS JANASCHII IN COMPLEX WITH GUIDE DNA organism=METHANOCALDOCOCCUS JANNASCHII DNA sequence DT(D1) DG(D2) DA(D3) DG(D4) DG(D5) DT(D6) DA(D7) DG(D8) DA(D19) DG(D20):DT(D21) chainA ( 36) PHE45 0 0 0 0 0 0 0 0 0 24 ( 90) LYS107 0 0 0 0 0 0 0 0 0 6 (192) GLU209 0 0 0 0 0 0 0 0 0 10 (193) ILE210 0 0 0 0 0 0 0 0 0 2 (196) HIS213 0 0 0 0 0 0 0 0 0 40 (200) TYR217 0 0 0 0 0 0 0 0 0 47 (226) GLU243 0 0 0 0 0 0 0 0 5 0 (229) GLU246 0 0 0 0 0 0 0 0 0 23 (429) ASN458 1 0 0 0 0 0 0 0 0 0 prot.sequence mvlnkvtykinaykikeefipkevhfyriksrfvnFyggmiinkkdksfvlpykvdnkvlkpidieyikslkleyvkpeiaeklvrgylKsvhkiepelsriiknirkhkvvenikvesyceyevkkhdgdyylilnfrhtasitkhlwdfvnrdkalleeyvgkkiifkpnpkvrytislvdapnpqkieEImsHiikYykwsedmvkstfgeidynqpimyceEilEpfapqfcnlvfymdeldsyilkelqsywrlsnenkgkiineiakklrfidntpkelefmkfnntpllvkdvnknptkiystntlftwikiylpydvpeiirnknlltyilideeikdelkaikdkvnkmfrnynkianktelpkfnyanrwkyfstddirgiikeiksefndeicfaliigkeyeilkkqlfdlkiisqNilwenwrkddkgymtnnlliqimgklgikyfildsktpydyimgldtgnhrvggctvvydsegkirriqpietperlhlpyvieylenkanidmenknilflrdgfiqnserndlkeiskelnsnievisirknnkykvftsdyrigsvfgndgiflphktpfgsnpvklstwlrfncgneeglkinesimqllydltkmnysaylripapihyadkfvkalgknwkideellkhgflyfi >5gat_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=SOLUTION NMR STRUCTURE OF THE WILD TYPE DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13BP DNA CONTAINING A CGATA SITE, 35 STRUCTURES organism=EMERICELLA NIDULANS DNA sequence DC(B101):DG(C126) DA(B102):DT(C125) DG(B103):DC(C124) DC(B104):DG(C123) DG(B105):DC(C122) DA(B106):DT(C121) DT(B107):DA(C120) DA(B108):DT(C119) DG(B109):DC(C118) DA(B110):DT(C117) DG(B111):DC(C116) DA(B112):DT(C115) DC(B113):DG(C114) chainA ( 22) LEU22 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 24) ARG24 0 0 0 0 14 2 0 0 0 0 0 0 0 ( 38) LEU38 0 0 0 0 0 5 8 0 0 0 0 0 0 ( 39) PHE39 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 42) LEU42 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence mkngeqngpttctncftqttpLwRrnpegqplcnacgLFlkLhgvvrplslktdvikkRnrnsans >5gke_A: title=STRUCTURE OF ENDOMS-DSDNA1 COMPLEX organism=Thermococcus kodakarensis KOD1 DNA sequence DG(D1):DC(C15) DG(D2):DC(C14) DA(D3):DT(C13) DC(D4):DG(C12) DG(D5):DC(C11) DA(D6):DT(C10) DC(D7):DG(C9) DT(D9):DA(C7) DG(D10):DC(C6) DT(D11):DA(C5) DA(D12):DT(C4) DG(D13):DC(C3) DC(D14):DG(C2) DG(D15):DC(C1) chainA (182) ARG183 0 0 0 0 0 3 1 0 0 0 0 0 0 0 (185) GLU186 0 0 0 2 1 0 0 0 0 0 0 0 0 0 prot.sequence skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr >5gke_AB: title=STRUCTURE OF ENDOMS-DSDNA1 COMPLEX organism=Thermococcus kodakarensis KOD1 DNA sequence DG(D1):DC(C15) DG(D2):DC(C14) DA(D3):DT(C13) DC(D4):DG(C12) DG(D5):DC(C11) DA(D6):DT(C10) DC(D7):DG(C9) DT(D9):DA(C7) DG(D10):DC(C6) DT(D11):DA(C5) DA(D12):DT(C4) DG(D13):DC(C3) DC(D14):DG(C2) DG(D15):DC(C1) chainA (182) ARG183 0 0 0 0 0 3 1 0 0 0 0 0 0 0 (185) GLU186 0 0 0 2 1 0 0 0 0 0 0 0 0 0 chainB (182) ARG183 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (185) GLU186 0 0 0 0 0 0 0 0 0 0 6 0 0 0 prot.sequence skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr/skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr >5gkf_A: title=STRUCTURE OF ENDOMS-DSDNA1' COMPLEX organism=Thermococcus kodakarensis KOD1 DNA sequence DG(D1):DC(C15) DG(D2):DC(C14) DA(D3):DT(C13) DC(D4):DG(C12) DG(D5):DC(C11) DA(D6):DT(C10) DC(D7):DG(C9) DT(D9):DA(C7) DG(D10):DC(C6) DT(D11):DA(C5) DA(D12):DT(C4) DG(D13):DC(C3) DC(D14):DG(C2) DG(D15):DC(C1) chainA (182) ARG183 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (185) GLU186 0 0 0 0 0 0 0 0 0 1 5 0 0 0 prot.sequence skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr >5gkf_AB: title=STRUCTURE OF ENDOMS-DSDNA1' COMPLEX organism=Thermococcus kodakarensis KOD1 DNA sequence DC(C1):DG(D15) DG(C2):DC(D14) DC(C3):DG(D13) DT(C4):DA(D12) DA(C5):DT(D11) DC(C6):DG(D10) DA(C7):DT(D9) DG(C9):DC(D7) DT(C10):DA(D6) DC(C11):DG(D5) DG(C12):DC(D4) DT(C13):DA(D3) DC(C14):DG(D2) DC(C15):DG(D1) chainA (182) ARG183 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (185) GLU186 0 0 0 5 1 0 0 0 0 0 0 0 0 0 chainB (182) ARG183 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (185) GLU186 0 0 0 0 0 0 0 0 0 1 3 0 0 0 prot.sequence skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr/skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr >5gkg_AB: title=STRUCTURE OF ENDOMS-DSDNA1'' COMPLEX organism=Thermococcus kodakarensis KOD1 DNA sequence DG(D1):DC(C15) DG(D2):DC(C14) DA(D3):DT(C13) DC(D4):DG(C12) DG(D5):DC(C11) DA(D6):DT(C10) DC(D7):DG(C9) DT(D9):DA(C7) DG(D10):DC(C6) DT(D11):DA(C5) DA(D12):DT(C4) DG(D13):DC(C3) DC(D14):DG(C2) DG(D15):DC(C1) chainA (182) ARG183 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (185) GLU186 0 0 0 0 0 0 0 0 0 1 5 0 0 0 chainB (182) ARG183 0 0 0 0 0 3 2 0 0 0 0 0 0 0 (185) GLU186 0 0 0 6 1 0 0 0 0 0 0 0 0 0 prot.sequence skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr/skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr >5gkg_B: title=STRUCTURE OF ENDOMS-DSDNA1'' COMPLEX organism=Thermococcus kodakarensis KOD1 DNA sequence DG(D1):DC(C15) DG(D2):DC(C14) DA(D3):DT(C13) DC(D4):DG(C12) DG(D5):DC(C11) DA(D6):DT(C10) DC(D7):DG(C9) DT(D9):DA(C7) DG(D10):DC(C6) DT(D11):DA(C5) DA(D12):DT(C4) DG(D13):DC(C3) DC(D14):DG(C2) DG(D15):DC(C1) chainB (182) ARG183 0 0 0 0 0 3 2 0 0 0 0 0 0 0 (185) GLU186 0 0 0 6 1 0 0 0 0 0 0 0 0 0 prot.sequence skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr >5gkh_A: title=STRUCTURE OF ENDOMS-DSDNA2 COMPLEX organism=Thermococcus kodakarensis KOD1 DNA sequence DA(D1):DT(C15) DC(D2):DG(C14) DG(D3):DC(C13) DG(D4):DC(C12) DC(D5):DG(C11) DA(D6):DT(C10) DC(D7):DG(C9) DT(D9):DA(C7) DG(D10):DC(C6) DG(D11):DC(C5) DC(D12):DG(C4) DA(D13):DT(C3) DC(D14):DG(C2) DG(D15):DC(C1) chainA (182) ARG183 0 0 0 0 0 1 2 0 0 0 0 0 0 0 (185) GLU186 0 0 0 2 1 0 0 0 0 0 0 0 0 0 prot.sequence skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr >5gkh_AB: title=STRUCTURE OF ENDOMS-DSDNA2 COMPLEX organism=Thermococcus kodakarensis KOD1 DNA sequence DA(D1):DT(C15) DC(D2):DG(C14) DG(D3):DC(C13) DG(D4):DC(C12) DC(D5):DG(C11) DA(D6):DT(C10) DC(D7):DG(C9) DT(D9):DA(C7) DG(D10):DC(C6) DG(D11):DC(C5) DC(D12):DG(C4) DA(D13):DT(C3) DC(D14):DG(C2) DG(D15):DC(C1) chainA (182) ARG183 0 0 0 0 0 1 2 0 0 0 0 0 0 0 (185) GLU186 0 0 0 2 1 0 0 0 0 0 0 0 0 0 chainB (182) ARG183 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (185) GLU186 0 0 0 0 0 0 0 0 0 1 5 0 0 0 prot.sequence skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr/skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr >5gki_AB: title=STRUCTURE OF ENDOMS-DSDNA3 COMPLEX organism=Thermococcus kodakarensis KOD1 DNA sequence DG(C1):DC(D15) DC(C2):DG(D14) DC(C3):DG(D13) DT(C4):DA(D12) DA(C5):DT(D11) DG(C6):DC(D10) DG(C7):DC(D9) DC(C9):DG(D7) DC(C10):DG(D6) DC(C11):DG(D5) DG(C12):DC(D4) DT(C13):DA(D3) DC(C14):DG(D2) DC(C15):DG(D1) chainA (182) ARG183 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (185) GLU186 0 0 0 5 1 0 0 0 0 0 0 0 0 0 chainB (182) ARG183 0 0 0 0 0 0 0 2 1 0 0 0 0 0 (185) GLU186 0 0 0 0 0 0 0 0 0 1 5 0 0 0 prot.sequence skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr/skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr >5gki_B: title=STRUCTURE OF ENDOMS-DSDNA3 COMPLEX organism=Thermococcus kodakarensis KOD1 DNA sequence DG(D1):DC(C15) DG(D2):DC(C14) DA(D3):DT(C13) DC(D4):DG(C12) DG(D5):DC(C11) DG(D6):DC(C10) DG(D7):DC(C9) DC(D9):DG(C7) DC(D10):DG(C6) DT(D11):DA(C5) DA(D12):DT(C4) DG(D13):DC(C3) DG(D14):DC(C2) DC(D15):DG(C1) chainB (182) ARG183 0 0 0 0 0 1 2 0 0 0 0 0 0 0 (185) GLU186 0 0 0 5 1 0 0 0 0 0 0 0 0 0 prot.sequence skdkvtvitspsteelvslvnsalleeamltifarckvhydgrakselgsgdrviivkpdgsflihqskkrepvnwqppgsrvrlelrenpvlvsirrkpretleveleevymvsvfraedyeelaltgseaemaelifenpeviepgfkplfrekaigtgivavlgrdsdgnivvlelkrRraElhavrqlksyveilreeygdkvrgilvapsltsgakrllekeglefrkleppkr >5gnj_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DG(D804):DC(C616) DG(D806):DC(C615) DT(D807):DA(C614) DC(D808):DG(C613) DA(D809):DT(C612) DC(D810):DG(C611) DG(D811):DC(C610) DT(D812):DA(C609) DG(D813):DC(C608) DT(D814):DA(C607) DT(D815):DA(C606) DC(D816):DG(C605) DC(D817):DG(C604) chainA ( 2) HIS453 0 0 2 7 10 0 0 0 0 0 0 0 0 ( 6) GLU457 0 0 0 5 10 1 0 0 0 0 0 0 0 ( 9) ARG460 0 0 0 8 0 0 0 0 0 0 0 0 0 ( 10) ARG461 0 0 0 0 0 7 10 0 0 0 0 0 0 chainB ( 5) HIS453 0 0 0 0 0 0 0 14 12 8 0 0 0 ( 9) GLU457 0 0 0 0 0 0 1 9 7 0 0 0 0 ( 12) ARG460 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 13) ARG461 0 0 0 0 0 9 2 0 0 0 0 0 0 prot.sequence nHveaErqRReklnqrfyalravvpnvskmdkasllgdaiayinelkskvvkteseklqiknqleevklelagr/eplnHveaErqRReklnqrfyalravvpnvskmdkasllgdaiayinelkskvvkteseklqiknqleevklelagr >5gnj_GIN:HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DG(L805):DC(K616) DG(L806):DC(K615) DT(L807):DA(K614) DC(L808):DG(K613) DA(L809):DT(K612) DC(L810):DG(K611) DG(L811):DC(K610) DT(L812):DA(K609) DG(L813):DC(K608) DT(L814):DA(K607) DT(L815):DA(K606) DC(L816):DG(K605) DC(L817):DG(K604) chainG ( 2) HIS453 0 0 5 8 9 0 0 0 0 0 0 0 0 ( 6) GLU457 0 0 1 5 10 1 0 0 0 0 0 0 0 ( 9) ARG460 0 0 1 8 0 0 0 0 0 0 0 0 0 ( 10) ARG461 0 0 0 0 0 4 8 0 0 0 0 0 0 chainI ( 5) HIS453 0 0 0 0 0 0 0 9 13 8 0 0 0 ( 9) GLU457 0 0 0 0 0 0 3 11 5 0 0 0 0 ( 12) ARG460 0 0 0 0 0 0 0 0 9 0 0 0 0 ( 13) ARG461 0 0 0 0 0 10 5 0 0 0 0 0 0 chainN prot.sequence nHveaErqRReklnqrfyalravvpnvskmdkasllgdaiayinelkskvvkteseklqiknqleevklelag/eplnHveaErqRReklnqrfyalravvpnvskmdkasllgdaiayinelkskvvkteseklqiknqleevklela/nhveAerqRreKLnqrfyalravvpnvskmdkasllgdaiayinelkskvvkteseklqiknqleevklelag >5gnj_I:HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DG(L805):DC(K616) DG(L806):DC(K615) DT(L807):DA(K614) DC(L808):DG(K613) DA(L809):DT(K612) DC(L810):DG(K611) DG(L811):DC(K610) DT(L812):DA(K609) DG(L813):DC(K608) DT(L814):DA(K607) DT(L815):DA(K606) DC(L816):DG(K605) DC(L817):DG(K604) chainI ( 5) HIS453 0 0 0 0 0 0 0 9 13 8 0 0 0 ( 9) GLU457 0 0 0 0 0 0 3 11 5 0 0 0 0 ( 12) ARG460 0 0 0 0 0 0 0 0 9 0 0 0 0 ( 13) ARG461 0 0 0 0 0 10 5 0 0 0 0 0 0 prot.sequence eplnHveaErqRReklnqrfyalravvpnvskmdkasllgdaiayinelkskvvkteseklqiknqleevklela >5gpc_ABCD:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=STRUCTURAL ANALYSIS OF FATTY ACID DEGRADATION REGULATOR FADR FROM BACILLUS HALODURANS organism=Bacillus halodurans DNA sequence DA(E2):DT(G21) DT(E3):DA(G20) DG(E4):DC(G19) DA(E5):DT(G18) DA(E6):DT(G17) DT(E7):DA(G16) DG(E8):DC(G15) DA(E9):DT(G14) DA(E10):DT(G13) DT(E11):DA(G12) DA(E12):DT(G11) DC(E13):DG(G10) DT(E14):DA(G9) DC(E15):DG(G8) DA(E16):DT(G7) DT(E17):DA(G6) DT(E18):DA(G5) DC(E19):DG(G4) DA(E20):DT(G3) DT(E21):DA(G2) chainA ( 27) VAL30 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ASP41 0 0 0 0 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR43 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR45 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 ( 43) LEU46 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 36) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 37) ASP41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 0 ( 39) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 41) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 ( 42) LEU46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 chainC ( 37) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 38) ASP41 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 40) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 42) TYR45 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 ( 43) LEU46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 chainD ( 26) VAL30 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ALA40 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ASP41 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR43 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR45 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) LEU46 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkgpkydqiidaavqviaehgyhqaqVskiakaagvADgTiYLyfnnkedvlislfqekmgrfvdkirsqmneatdveeklkilvnmhfkqlaadhklaivtqlelrqsntelrlkinevlkgylnlldellmegkekgyffqeldtrlarqmifgtldevvtnwvmkdckydltalvkpvhqlllgglr/kgpkydqiidaavqviaehgyhqaqVskiakaagvADgTiYLyfnnkedvlislfqekmgrfvdkirsqmneatdveeklkilvnmhfkqlaadhklaivtqlelrqsntelrlkinevlkgylnlldellmegkekgyffqeldtrlarqmifgtldevvtnwvmkdckydltalvkpvhqlllgglrh/kkgpkydqiidaavqviaehgyhqaqvskiakaagvADgTiYLyfnnkedvlislfqekmgrfvdkirsqmneatdveeklkilvnmhfkqlaadhklaivtqlelrqsntelrlkinevlkgylnlldellmegkekgyffqeldtrlarqmifgtldevvtnwvmkdckydltalvkpvhqlllgglr/kgpkydqiidaavqviaehgyhqaqVskiakaagvADgTiYLyfnnkedvlislfqekmgrfvdkirsqmneatdveeklkilvnmhfkqlaadhklaivtqlelrqsntelrlkinevlkgylnlldellmegkekgyffqeldtrlarqmifgtldevvtnwvmkdckydltalvkpvhqlllgglrh >5gpc_B:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=STRUCTURAL ANALYSIS OF FATTY ACID DEGRADATION REGULATOR FADR FROM BACILLUS HALODURANS organism=Bacillus halodurans DNA sequence DA(E2):DT(G21) DT(E3):DA(G20) DG(E4):DC(G19) DA(E5):DT(G18) DA(E6):DT(G17) DT(E7):DA(G16) DG(E8):DC(G15) DA(E9):DT(G14) DA(E10):DT(G13) DT(E11):DA(G12) DA(E12):DT(G11) DC(E13):DG(G10) DT(E14):DA(G9) DC(E15):DG(G8) DA(E16):DT(G7) DT(E17):DA(G6) DT(E18):DA(G5) DC(E19):DG(G4) DA(E20):DT(G3) DT(E21):DA(G2) chainB ( 26) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 36) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 37) ASP41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 0 ( 39) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 41) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 ( 42) LEU46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 prot.sequence kgpkydqiidaavqviaehgyhqaqVskiakaagvADgTiYLyfnnkedvlislfqekmgrfvdkirsqmneatdveeklkilvnmhfkqlaadhklaivtqlelrqsntelrlkinevlkgylnlldellmegkekgyffqeldtrlarqmifgtldevvtnwvmkdckydltalvkpvhqlllgglrh >5gq9_B:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS ARGONAUTE IN COMPLEX WITH G1C SIDNA AND DNA TARGET organism=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) DNA sequence DA(F4):DT(E16) DC(F5):DG(E15) DA(F6):DT(E14) DA(F7):DT(E13) DC(F8):DG(E12) DC(F9):DG(E11) DT(F10):DA(E10) DA(F11):DT(E9) DC(F12):DG(E8) DT(F13):DA(E7) DA(F14):DT(E6) DC(F15):DG(E5) DC(F16):DG(E4) DT(F17):DA(E3) DC(F18):DG(E2) chainB ( 41) TYR43 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) PRO44 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG59 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) LEU267 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 (433) HIS445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 (434) ARG446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (437) ASN449 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 (536) ARG548 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (598) PHE610 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (599) ARG611 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 (603) ARG615 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (635) PHE647 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 prot.sequence hlgktevflnrfalrplnpeelrpwrlevvldpppgreevYPllaqvarraggvtvRmgdglaswsppevlvlegtltyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpkelplpgglslldyhaskgrlqgreggrvawvadpkdprkpiphltgllvpvltLedlslalslpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppmawedrnrlkalllreglpsqilnvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavggdgghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrdgRvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrdFRgtpRplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >5gse_D:Histone-fold; title=CRYSTAL STRUCTURE OF UNUSUAL NUCLEOSOME organism=HOMO SAPIENS DNA sequence DA(I1):DT(J250) DT(I2):DA(J249) DC(I3):DG(J248) DG(I4):DC(J247) DG(I5):DC(J246) DA(I6):DT(J245) DT(I7):DA(J244) DG(I8):DC(J243) DT(I9):DA(J242) DA(I10):DT(J241) DT(I11):DA(J240) DA(I12):DT(J239) DT(I13):DA(J238) DA(I14):DT(J237) DT(I15):DA(J236) DC(I16):DG(J235) DT(I17):DA(J234) DG(I18):DC(J233) DA(I19):DT(J232) DC(I20):DG(J231) DA(I21):DT(J230) DC(I22):DG(J229) DG(I23):DC(J228) DT(I24):DA(J227) DG(I25):DC(J226) DC(I26):DG(J225) 5CM(I27):DG(J224) DT(I28):DA(J223) DG(I29):5CM(J222) DG(I30):DC(J221) DA(I31):DT(J220) DG(I32):DC(J219) DA(I33):DT(J218) DC(I34):DG(J217) DT(I35):DA(J216) DA(I36):DT(J215) DG(I37):DC(J214) DG(I38):DC(J213) DG(I39):DC(J212) DA(I40):DT(J211) DG(I41):DC(J210) DT(I42):DA(J209) DA(I43):DT(J208) DA(I44):DT(J207) DT(I45):DA(J206) DC(I46):DG(J205) DC(I47):DG(J204) DC(I48):DG(J203) DC(I49):DG(J202) DT(I50):DA(J201) DT(I51):DA(J200) DG(I52):DC(J199) DG(I53):DC(J198) DC(I54):DG(J197) DG(I55):DC(J196) DG(I56):DC(J195) DT(I57):DA(J194) DT(I58):DA(J193) DA(I59):DT(J192) DA(I60):DT(J191) DA(I61):DT(J190) DA(I62):DT(J189) DC(I63):DG(J188) DG(I64):DC(J187) DC(I65):DG(J186) DG(I66):DC(J185) DG(I67):DC(J184) DG(I68):DC(J183) DG(I69):DC(J182) DG(I70):DC(J181) DA(I71):DT(J180) DC(I72):DG(J179) DA(I73):DT(J178) DG(I74):DC(J177) DC(I75):DG(J176) DG(I76):DC(J175) DC(I77):DG(J174) DG(I78):DC(J173) DT(I79):DA(J172) DA(I80):DT(J171) DC(I81):DG(J170) DG(I82):DC(J169) DT(I83):DA(J168) DG(I84):DC(J167) DC(I85):DG(J166) DG(I86):DC(J165) DT(I87):DA(J164) DT(I88):DA(J163) DT(I89):DA(J162) DA(I90):DT(J161) DA(I91):DT(J160) DG(I92):DC(J159) DC(I93):DG(J158) DG(I94):DC(J157) DG(I95):DC(J156) DT(I96):DA(J155) DG(I97):DC(J154) DC(I98):DG(J153) DT(I99):DA(J152) DA(I100):DT(J151) DG(I101):DC(J150) DA(I102):DT(J149) DG(I103):DC(J148) DC(I104):DG(J147) DT(I105):DA(J146) DG(I106):DC(J145) DT(I107):DA(J144) DC(I108):DG(J143) DT(I109):DA(J142) DA(I110):DT(J141) DC(I111):DG(J140) DG(I112):DC(J139) DA(I113):DT(J138) DC(I114):DG(J137) DC(I115):DG(J136) DA(I116):DT(J135) DA(I117):DT(J134) DT(I118):DA(J133) DT(I119):DA(J132) DG(I120):DC(J131) DA(I121):DT(J130) DG(I122):DC(J129) DC(I123):DG(J128) DT(I124):DA(J127) DC(I125):DG(J126) DG(I126):DC(J125) DA(I127):DT(J124) DG(I128):DC(J123) DC(I129):DG(J122) 5CM(I130):DG(J121) DA(I136):DT(J115) DC(I137):DG(J114) DT(I138):DA(J113) DA(I139):DT(J112) DG(I140):DC(J111) DG(I141):DC(J110) DG(I142):DC(J109) DA(I143):DT(J108) DG(I144):DC(J107) DT(I145):DA(J106) DA(I146):DT(J105) DA(I147):DT(J104) DT(I148):DA(J103) DC(I149):DG(J102) DC(I150):DG(J101) DC(I151):DG(J100) DC(I152):DG(J99) DT(I153):DA(J98) DT(I154):DA(J97) DG(I155):DC(J96) DG(I156):DC(J95) DC(I157):DG(J94) DG(I158):DC(J93) DG(I159):DC(J92) DT(I160):DA(J91) DT(I161):DA(J90) DA(I162):DT(J89) DA(I163):DT(J88) DA(I164):DT(J87) DA(I165):DT(J86) DC(I166):DG(J85) DG(I167):DC(J84) DC(I168):DG(J83) DG(I169):DC(J82) DG(I170):DC(J81) DG(I171):DC(J80) DG(I172):DC(J79) DG(I173):DC(J78) DA(I174):DT(J77) DC(I175):DG(J76) DA(I176):DT(J75) DG(I177):DC(J74) DC(I178):DG(J73) DG(I179):DC(J72) DC(I180):DG(J71) DG(I181):DC(J70) DT(I182):DA(J69) DA(I183):DT(J68) DC(I184):DG(J67) DG(I185):DC(J66) DT(I186):DA(J65) DG(I187):DC(J64) DC(I188):DG(J63) DG(I189):DC(J62) DT(I190):DA(J61) DT(I191):DA(J60) DT(I192):DA(J59) DA(I193):DT(J58) DA(I194):DT(J57) DG(I195):DC(J56) DC(I196):DG(J55) DG(I197):DC(J54) DG(I198):DC(J53) DT(I199):DA(J52) DG(I200):DC(J51) DC(I201):DG(J50) DT(I202):DA(J49) DA(I203):DT(J48) DG(I204):DC(J47) DA(I205):DT(J46) DG(I206):DC(J45) DC(I207):DG(J44) DT(I208):DA(J43) DG(I209):DC(J42) DT(I210):DA(J41) DC(I211):DG(J40) DT(I212):DA(J39) DA(I213):DT(J38) DC(I214):DG(J37) DG(I215):DC(J36) DA(I216):DT(J35) DC(I217):DG(J34) DC(I218):DG(J33) DA(I219):DT(J32) DA(I220):DT(J31) DT(I221):DA(J30) DT(I222):DA(J29) DG(I223):DC(J28) DA(I224):DT(J27) DG(I225):DC(J26) DC(I226):DG(J25) DG(I227):DC(J24) DG(I228):DC(J23) DC(I229):DG(J22) DC(I230):DG(J21) DT(I231):DA(J20) DC(I232):DG(J19) DG(I233):DC(J18) DG(I234):DC(J17) DC(I235):DG(J16) DA(I236):DT(J15) DC(I237):DG(J14) DC(I238):DG(J13) DG(I239):DC(J12) DG(I240):DC(J11) DG(I241):DC(J10) DA(I242):DT(J9) DT(I243):DA(J8) DT(I244):DA(J7) DC(I245):DG(J6) DT(I246):DA(J5) DC(I247):DG(J4) DG(I248):DC(J3) DA(I249):DT(J2) DT(I250):DA(J1) chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >5gsu_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE CONSISTING OF HUMAN TESTIS-SPECIFIC HISTONE VARIANTS, TH2A AND TH2B organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) HIS39 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 16) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 11) ILE37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence kpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ksksrssraglqfpvgrihrllrkgnyaeRigagapvylaavleyltaeilelagnasrdnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpk/rkrtrkesysIyiykvlkqvhpdtgisskamsimnsfvtdiferiaseasrlahyskrstissreiqtavrlllpgelakhavsegtkavtkytssk/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/sksrssraglqfpvgrihrllrkgnyaeRigagapvylaavleyltaeilelagnasrdnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpk/trkesysiyiykvlkqvhpdtgisskamSimnsfvtdiferiaseasrlahyskrstissreiqtavrlllpgelakhavsegtkavtkytssk >5gsu_C:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE CONSISTING OF HUMAN TESTIS-SPECIFIC HISTONE VARIANTS, TH2A AND TH2B organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainC ( 30) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ksksrssraglqfpvgrihrllrkgnyaeRigagapvylaavleyltaeilelagnasrdnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpk >5gt0_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME COMPLEX WITH HUMAN TESTIS-SPECIFIC HISTONE VARIANTS, TH2A organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainD ( 2) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) VAL39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/sksrssraglqfpvgrihrllrkgnyaeRigagapvylaavleyltaeilelagnasrdnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpkk/kRkrsRkesysVyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ksksrssraglqfpvgrihrllrkgnyaErigagapvylaavleyltaeilelagnasrdnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpk/sRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >5gt0_C:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME COMPLEX WITH HUMAN TESTIS-SPECIFIC HISTONE VARIANTS, TH2A organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sksrssraglqfpvgrihrllrkgnyaeRigagapvylaavleyltaeilelagnasrdnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpkk >5gt3_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME PARTICLE IN THE PRESENCE OF HUMAN TESTIS-SPECIFIC HISTONE VARIANT, HTH2B organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/rtrkesysiyiykvlkqvhpdtgisskamSimnsfvtdiferiaseasrlahyskrstissreiQtavrlllpgelakhavsegtkavtkytssk/kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyserVgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/kesysiyiykvlkqvhpdtgisskamsImnsfvtdiferiaseasrlahyskrstissreiqtavrlllpgelakhavsegtkavtkytssk >5gt3_C:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME PARTICLE IN THE PRESENCE OF HUMAN TESTIS-SPECIFIC HISTONE VARIANT, HTH2B organism=? DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk >5gtc_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF COMPLEX BETWEEN DMAP-SH CONJUGATED WITH A KAPOSI'S SARCOMA HERPESVIRUS LANA PEPTIDE (5-15) AND NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 26) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/rakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/sRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/pHRYrpgtvalreirryqkstelliRkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5gwi_B:Type_II_DNA_topoisomerase; title=STRUCTURE OF A HUMAN TOPOISOMERASE IIBETA FRAGMENT IN COMPLEX WITH DNA AND E7873R organism=Homo sapiens DNA sequence DA(E1):DT(D20) DG(E2):DC(D19) DC(E3):DG(D18) DC(E4):DG(D17) DG(E5):DC(D16) DA(E6):DT(D15) DG(E7):DC(D14) DC(E8):DG(D13) chainB ( 57) LYS505 0 0 0 0 0 0 4 1 (276) GLN778 0 0 0 0 0 0 1 5 (277) ALA779 0 0 0 0 0 0 2 0 (368) GLU870 0 0 0 3 0 0 0 0 (370) ILE872 0 0 0 23 19 0 0 0 (375) ALA877 0 0 0 1 0 0 0 0 prot.sequence skikgipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplrgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitpakeakeyfadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlhgtkhltyndfinkelilfsnsDnersipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeQAlmmtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspryiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaEgIgtgwAcklpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqgpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >5gwj_B:Type_II_DNA_topoisomerase; title=STRUCTURE OF A HUMAN TOPOISOMERASE IIBETA FRAGMENT IN COMPLEX WITH DNA AND E7873S organism=Homo sapiens DNA sequence DA(E1):DT(D20) DG(E2):DC(D19) DC(E3):DG(D18) DC(E4):DG(D17) DG(E5):DC(D16) DA(E6):DT(D15) DG(E7):DC(D14) DC(E8):DG(D13) chainB ( 57) LYS505 0 0 0 0 0 0 4 2 (277) ALA779 0 0 0 0 0 0 2 0 (368) GLU870 0 0 0 1 0 0 0 0 (370) ILE872 0 0 0 23 13 0 0 0 (375) ALA877 0 0 0 1 0 0 0 0 prot.sequence skikgipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplrgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitpakeakeyfadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlhgtkhltyndfinkelilfsnsDneRsipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeqAlmmtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspryiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaEgIgtgwAcKlpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngtdktpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqegpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >5gwk_B:Type_II_DNA_topoisomerase; title=HUMAN TOPOISOMERASE IIALPHA IN COMPLEX WITH DNA AND ETOPOSIDE organism=Homo sapiens DNA sequence DG(D13):DC(E8) DC(D14):DG(E7) DT(D15):DA(E6) DC(D16):DG(E5) DG(D17):DC(E4) DG(D18):DC(E3) DC(D19):DG(E2) DT(D20):DA(E1) chainB ( 54) LYS489 2 2 0 0 0 0 0 0 (220) LYS655 0 0 0 1 1 0 0 0 (328) SER763 0 4 0 0 0 0 0 0 (421) ILE856 0 0 0 16 19 0 0 0 (426) SER861 0 0 0 0 2 0 0 0 prot.sequence kgipklddandaggrnstectliltegdsaktlavsglgvvgrdkygvfplrgKilnvreashkqimenaeinniikivglqykknyededslktlrygkimimtdqdqdgshikgllinfihhnwpsllrhrfleefitpivkvsknkqemafyslpefeewksstpnhkkwkvkyykglgtstskeakeyfadmkrhriqfkysgpeddaaislafsKkqiddrkewltnfmedrrqrkllglpedylygqtttyltyndfinkelilfsnsdnersipsmvdglkpgqrkvlftcfkrndkrevkvaqlagsvaemssyhhgemSlmmtiinlaqnfvgsnnlnllqpigqfgtrlhggkdsaspryiftmlsslarllfppkddhtlkflyddnqrvepewyipiipmvlingaegIgtgwSckipnfdvreivnnirrlmdgeeplpmlpsyknfkgtieelapnqyvisgevailnsttieiselpvrtwtqtykeqvlepmlngtpplitdyreyhtdttvkfvvkmteeklaeaervglhkvfklqtsltcnsmvlfdhvgclkkydtvldilrdffelrlkyyglrkewllgmlgaesaklnnqarfilekidgkiiienkpkkelikvliqrgydsdpvkawkeaqqsgptfnylldmplwyltkekkdelcrlrnekeqeldtlkrkspsdlwkedlatfieeleaveakekq >5gxq_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING H3.6 organism=HOMO SAPIENS DNA sequence DA(J147):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellvrkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlahsirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRyrpgtvalreirryqkstellvrkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlahsirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiQtavrlllpgelakhavsegtkavtkytsa >5gxq_D:Histone-fold; title=THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING H3.6 organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DA(J147) chainD ( 10) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >5gzb_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF TRANSCRIPTION FACTOR TEAD4 IN COMPLEX WITH M-CAT DNA organism=Homo sapiens DNA sequence DT(B1):DA(C13) DT(B2):DA(C12) DG(B3):DC(C11) DC(B4):DG(C10) DA(B5):DT(C9) DT(B6):DA(C8) DT(B7):DA(C7) DC(B8):DG(C6) DC(B9):DG(C5) DT(B10):DA(C4) DC(B11):DG(C3) DT(B12):DA(C2) DC(B13):DG(C1) chainA ( 33) MET74 0 0 0 0 0 0 0 0 0 0 7 1 0 ( 54) ARG95 0 0 0 0 0 0 0 0 3 6 0 0 0 ( 55) LYS96 0 0 0 0 0 1 5 7 4 0 0 0 0 ( 58) SER99 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 59) SER100 0 0 0 2 7 1 0 0 0 0 0 0 0 ( 62) GLN103 0 0 0 0 6 11 5 0 0 0 0 0 0 ( 63) VAL104 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 66) ARG107 0 0 0 0 1 1 0 0 0 0 0 0 0 prot.sequence vwspdieqsfqealaiyppcgrrkiilsdegkMygrneliaryiklrtgktrtRKqvSShiQVlaRrkareiqaklkdqaakdkalqsmaa >5h1c_A:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=HUMAN RAD51 POST-SYNAPTIC COMPLEXES organism=HOMO SAPIENS DNA sequence DT(D1):DA(E9) DT(D2):DA(E8) DT(D3):DA(E7) DT(D4):DA(E6) DT(D5):DA(E5) DT(D6):DA(E4) DT(D7):DA(E3) DT(D8):DA(E2) DT(D9):DA(E1) chainA (214) ARG235 5 0 0 0 0 0 0 0 0 (217) LEU238 1 0 0 0 0 0 0 0 0 (249) VAL270 0 0 1 0 0 0 0 0 0 (252) VAL273 0 0 1 15 0 0 0 0 0 (253) ASP274 0 0 5 8 0 0 0 0 0 (258) PRO283 0 0 0 1 0 0 0 0 0 prot.sequence pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLsarqmhlarflrmllrladefgvavvitnqvVaqVDgaadPkkpiggniiahasttrlylrkgrgetricqiydspclpeaeamfainadgvgd >5h1c_ABC:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=HUMAN RAD51 POST-SYNAPTIC COMPLEXES organism=HOMO SAPIENS DNA sequence DT(D1):DA(E9) DT(D2):DA(E8) DT(D3):DA(E7) DT(D4):DA(E6) DT(D5):DA(E5) DT(D6):DA(E4) DT(D7):DA(E3) DT(D8):DA(E2) DT(D9):DA(E1) chainA (214) ARG235 5 0 0 0 0 0 0 0 0 (217) LEU238 1 0 0 0 0 0 0 0 0 (249) VAL270 0 0 1 0 0 0 0 0 0 (252) VAL273 0 0 1 15 0 0 0 0 0 (253) ASP274 0 0 5 8 0 0 0 0 0 (258) PRO283 0 0 0 1 0 0 0 0 0 chainB (214) ARG235 0 0 16 4 0 0 0 0 0 (217) LEU238 0 0 5 2 0 0 0 0 0 (218) SER239 0 3 3 0 0 0 0 0 0 (252) VAL273 0 0 0 0 0 3 14 0 0 (253) ASP274 0 0 0 0 0 5 7 0 0 (258) PRO283 0 0 0 0 0 0 1 0 0 chainC (214) ARG235 0 0 0 0 0 19 7 0 0 (217) LEU238 0 0 0 0 0 3 1 0 0 (218) SER239 0 0 0 0 1 3 0 0 0 (249) VAL270 0 0 0 0 0 0 0 0 1 (252) VAL273 0 0 0 0 0 0 0 0 3 (253) ASP274 0 0 0 0 0 0 0 0 7 prot.sequence pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLsarqmhlarflrmllrladefgvavvitnqvVaqVDgaadPkkpiggniiahasttrlylrkgrgetricqiydspclpeaeamfainadgvgd/pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvvaqVDgaadPkkpiggniiahasttrlylrkgrgetricqiydspclpeaeamfainadgvgd/pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvVaqVDgaadpkkpiggniiahasttrlylrkgrgetricqiydspclpeaeamfainadgvgd >5h3r_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MUTANT MARR C80S FROM E.COLI COMPLEXED WITH OPERATOR DNA organism=Escherichia coli DNA sequence DA(D2):DT(C21) DA(D3):DT(C20) DT(D4):DA(C19) DA(D5):DT(C18) DT(D6):DA(C17) DT(D7):DA(C16) DG(D8):DC(C15) DC(D9):DG(C14) DC(D10):DG(C13) DC(D11):DG(C12) DA(D12):DT(C11) DG(D13):DC(C10) DG(D14):DC(C9) DC(D15):DG(C8) DA(D16):DT(C7) DA(D17):DT(C6) DG(D18):DC(C5) DT(D19):DA(C4) DA(D20):DT(C3) DT(D21):DA(C2) chainA ( 64) ASP67 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LEU68 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ALA70 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR72 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG73 0 0 0 0 0 0 6 12 13 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG77 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 91) ARG94 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tsdlfneiiplgrlihmvnqkkdrllneylsplditaaqfkvlcsircaacitpvelkkvlsvDLgAlTRmldRlvskgwverlpnpndkRgvlvklttggaaiceqchqlvgqdlhqeltknltadevatleyllkkvlp >5h3r_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MUTANT MARR C80S FROM E.COLI COMPLEXED WITH OPERATOR DNA organism=Escherichia coli DNA sequence DA(C2):DT(D21) DT(C3):DA(D20) DA(C4):DT(D19) DC(C5):DG(D18) DT(C6):DA(D17) DT(C7):DA(D16) DG(C8):DC(D15) DC(C9):DG(D14) DC(C10):DG(D13) DT(C11):DA(D12) DG(C12):DC(D11) DG(C13):DC(D10) DG(C14):DC(D9) DC(C15):DG(D8) DA(C16):DT(D7) DA(C17):DT(D6) DT(C18):DA(D5) DA(C19):DT(D4) DT(C20):DA(D3) DT(C21):DA(D2) chainA ( 64) ASP67 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 ( 65) LEU68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 ( 67) ALA70 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 69) THR72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 ( 70) ARG73 0 0 0 0 0 0 0 0 0 0 0 13 12 6 0 0 0 0 0 0 ( 74) ARG77 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 91) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 chainB ( 63) ASP67 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LEU68 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ALA70 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR72 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG73 0 0 0 0 0 4 8 9 8 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG94 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tsdlfneiiplgrlihmvnqkkdrllneylsplditaaqfkvlcsircaacitpvelkkvlsvDLgAlTRmldRlvskgwverlpnpndkRgvlvklttggaaiceqchqlvgqdlhqeltknltadevatleyllkkvlp/sdlfneiiplgrlihmvnqkkdrllneylsplditaaqfkvlcsircaacitpvelkkvlsvDLgAlTRmldrlvskgwverlpnpndkRgvlvklttggaaiceqchqlvgqdlhqeltknltadevatleyllkkvlp >5h58_A:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=STRUCTURAL AND DYNAMICS STUDIES OF THE TETR FAMILY PROTEIN, CPRB FROM STREPTOMYCES COELICOLOR IN COMPLEX WITH ITS BIOLOGICAL OPERATOR SEQUENCE organism=? DNA sequence DG(E6):DC(F21) DC(E8):DG(F20) DG(E9):DC(F19) DG(E10):DC(F18) DC(E11):DG(F17) DA(E12):DT(F16) DC(E13):DG(F15) DG(E14):DC(F14) DT(E16):DC(F13) DC(E17):DG(F11) DT(E18):DA(F10) DG(E19):DC(F9) DT(E20):DA(F8) DT(E21):DA(F7) DG(E22):DC(F6) DA(E23):DT(F5) chainA ( 28) LEU32 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR47 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lraeqtratiigaaadlfdrrgyesttLseivahagvtkgalYfhfaakedlahaileiqsrtsrrlakdldgrgysslealmrltfgmarlcvqgpvlraglrlatapvrpplphpftewreiatsrlldavrqsdvhqdidvdsvahtlvcsvvgtreprrlaemwyilirgmvpvtrraryvtlaarleqe >5h58_ABCD:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=STRUCTURAL AND DYNAMICS STUDIES OF THE TETR FAMILY PROTEIN, CPRB FROM STREPTOMYCES COELICOLOR IN COMPLEX WITH ITS BIOLOGICAL OPERATOR SEQUENCE organism=STREPTOMYCES COELICOLOR A3(2) / STREPTOMYCES COELICOLOR A3(2) / STREPTOMYCES COELICOLOR A3(2) / STREPTOMYCES COELICOLOR A3(2) / STREPTOMYCES COELICOLOR A3(2) / STREPTOMYCES COELICOLOR A3(2) / STREPTOMYCES COELICOLOR A3(2) / STREPTOMYCES COELICOLOR A3(2) DNA sequence DT(F5):DA(E23) DC(F6):DG(E22) DA(F7):DT(E21) DA(F8):DT(E20) DC(F9):DG(E19) DA(F10):DT(E18) DG(F11):DC(E17) DC(F13):DT(E16) DC(F14):DG(E14) DG(F15):DC(E13) DT(F16):DA(E12) DG(F17):DC(E11) DC(F18):DG(E10) DC(F19):DG(E9) DG(F20):DC(E8) DC(F21):DG(E6) chainA ( 28) LEU32 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 43) TYR47 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 chainB ( 28) LEU32 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 38) THR42 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 39) LYS43 0 0 0 0 0 2 9 3 0 0 0 0 0 0 0 0 ( 43) TYR47 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 ( 44) PHE48 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 38) THR42 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 ( 39) LYS43 0 0 0 0 0 0 0 0 4 3 10 1 0 0 0 0 ( 43) TYR47 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 ( 44) PHE48 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 chainD ( 25) LEU32 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) SER33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 36) LYS43 0 0 0 17 7 1 0 0 0 0 0 0 0 0 0 0 ( 40) TYR47 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lraeqtratiigaaadlfdrrgyesttLseivahagvtkgalYfhfaakedlahaileiqsrtsrrlakdldgrgysslealmrltfgmarlcvqgpvlraglrlatapvrpplphpftewreiatsrlldavrqsdvhqdidvdsvahtlvcsvvgtreprrlaemwyilirgmvpvtrraryvtlaarleqe/lraeqtratiigaaadlfdrrgyesttLseivahagvTKgalYFhfaakedlahaileiqsrtsrrlakdldgrgysslealmrltfgmarlcvqgpvlraglrlatagvpvrpplphpftewreiatsrlldavrqsdvhqdidvdsvahtlvcsvvgtrtlepagreprrlaemwyilirgmvpvtrraryvtlaarleqet/lraeqtratiigaaadlfdrrgyesttlseivahagvTKgalYFhfaakedlahaileiqsrtsrrlakdldgrgysslealmrltfgmarlcvqgpvlraglrlatagvvrpplphpftewreiatsrlldavrqsdvhqdidvdsvahtlvcsvvgtrvvgreprrlaemwyilirgmvpvtrraryvtlaarleqet/eqtratiigaaadlfdrrgyesttLSeivahagvtKgalYfhfaakedlahaileiqsrtsrrlakdldysslealmrltfgmarlcvqgpvlraglrlatagvpvrlphpftewreiatsrlldavrqsdvhqdidvdsvahtlvcsvvgtrvagreprrlaemwyilirgmvpvtrraryvtlaarleqet >5h9e_AC: title=CRYSTAL STRUCTURE OF E. COLI CASCADE BOUND TO A PAM-CONTAINING DSDNA TARGET (32-NT SPACER) AT 3.20 ANGSTROM RESOLUTION. organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(M11):DC(N40) DC(M12):DG(N39) DT(M13):DA(N38) DC(M14):DG(N37) DG(M15):DC(N36) DA(M16):DT(N35) DT(M17):DA(N34) DG(M18):DC(N33) DT(M19):DT(N32) DT(M20):DG(N31) DT(M21):DC(N30) DT(M22):DC(N29) DA(M23):DA(N28) DT(M24):DT(N27) DT(M25):DA(N26) DT(M26):DA(N25) DA(M27):DC(N24) DT(M28):DA(N23) DT(M29):DA(N22) chainA (263) LYS268 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) THR301 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 (297) THR302 0 0 0 0 0 0 0 0 0 0 5 2 3 0 0 0 0 0 0 (348) GLN354 0 0 0 0 0 0 0 26 12 0 0 0 0 0 0 0 0 0 0 (349) ALA355 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (379) ARG393 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 (383) TYR397 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 (384) THR398 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (387) GLU401 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 (394) PHE408 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 (402) HIS416 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 (403) GLU417 0 0 0 0 0 0 0 0 0 0 6 0 3 0 0 0 0 0 0 (458) HIS472 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 (459) PRO473 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (467) LEU481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 (470) ALA484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 chainC ( 77) THR83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 80) SER86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 ( 83) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 (138) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (141) GLN147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 3 (145) ASP151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 17 0 (148) LEU154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 (149) THR155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence nllidnwipvrprnggkvqiinlqslycsrdqwrlslprddmelaalallvcigqiiapakddvefrhrimnpltedefqqliapwidmfylnhaehpfmqtkgvkandvtpmekllagvsgatncafvnqpgqgealcggctaialfnqanqapgfgggfksglrggtpvttfvrgidlrstvllnvltlprlqkqfptenqptwikpiksnesipassigfvrglfwqpahielcdpigigkcsccgqesnlrytgflkeKftftvnglwphphspclvtvkkgeveekflafTTsapswtqisrvvvdkiiqnegnrvaavvnqfrniapqsplelimggyrnnQAsilerrhdvlmgnvineivtvglgyktalRkalYTfaEgfknkdFkgagvsvHEtaerhfyrqsellipdvlanvnfsqadeviadlrdklhqlcemlfnqsvapyahHPklistlaLarAtlykhlrelkp/deidamalyrawqqldngscaqirrvsepdelrdipafyrlvqpfgwenprhqqallrmvfclsagknvirhqdkkTgiSlgRalansgrinerrifqliradrtadmvqlrrllthaepvldwplmarmltwwgkrErqQlleDfvLTt >5h9e_BDEFGHIJ: title=CRYSTAL STRUCTURE OF E. COLI CASCADE BOUND TO A PAM-CONTAINING DSDNA TARGET (32-NT SPACER) AT 3.20 ANGSTROM RESOLUTION. organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(N1) DT(N2) DG(N3) DT(N4) DT(N5) DG(N6) DG(N7) DC(N8) DA(N9) DA(N10) DG(N11) DC(N12) DC(N13) DA(N14) DG(N15) DG(N16) DA(N17) DT(N18) DC(N19) DT(N20) DG(N21) DA(N22) DA(N23) DC(N24) DA(N25) DA(N26) DT(N27) DA(N28) DC(N29) DC(N30) DG(N31) DT(N32) DC(N33) DA(N34) DT(N35) DC(N36) DG(N37) DA(N38) DG(N39) DC(N40) chainB ( 21) ALA23 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLN24 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG27 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG101 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) HIS123 0 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (109) ALA110 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) MET166 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) THR168 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) LYS177 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (109) ALA110 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) MET166 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) THR168 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) TRP199 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) PHE200 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER211 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) HIS213 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) LEU214 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (109) ALA110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) VAL111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) MET166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) TRP199 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) PHE200 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER211 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) HIS213 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) LEU214 0 0 0 0 0 0 0 12 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (109) ALA110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) MET166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) PHE200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) ALA202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER211 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) HIS213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) LEU214 0 0 0 0 0 0 0 0 0 0 0 0 0 14 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (109) ALA110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 (167) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 (199) PHE200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) HIS213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) LEU214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (189) TRP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) SER211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) HIS213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 (204) LEU214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 14 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) THR216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 85) TYR85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (103) THR103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (105) GLN105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 prot.sequence deidamalyrawqqldngscAQirRvsepdelrdipafyrlvqpfgwenprhqqallrmvfclsagknvirhqdkgislgralansgrinerRifqliradrtadmvqlrrlltHaepvldwplmarmltwwgkrerqqlledfvlttnkn/snfinihvlishspsclnrddmnmqkdaifggkrrvrissqslkramrksgyyaqnigesslrtihlaqlrdvlrqklgerfdqkiidktlallsgksvdeaekisadAvtpwvvgeiawfceqvakaeadnlddkkllkvlkediaairvnlqqgvdialsgrMaTsgmmtelgKvdgamsiahaitthqvdqefssgvfyryaninlaqlqenlggasreqaleiathvvhmlatevpgdmvmvnfsdmplsmanafekavkakdgflqpsiqafnqywdrvangyglngaaaqfslsvkqmptleqlkswvrnng/snfinihvlishspsclnrddmnmqkdaifggkrrvrissqslkramrksgyyaqnigesslrtihlaqlrdvlrqklgerfdqkiidktlallsgksvdeaekisadAvtpwvvgeiawfceqvakaeadnlddkkllkvlkediaairvnlqqgvdialsgrMaTsgmmtelgkvdgamsiahaitthqvdsdidWFtavddlqeqgSaHLgtqefssgvfyryaninlaqlqenlggasreqaleiathvvhmlatevpgakqrtyaafnpadmvmvnfsdmplsmanafekavkakdgflqpsiqafnqywdrvangyglngaaaqfsltaqvkqmptleqlkswvrnng/snfinihvlishspsclnrddmnmqkdaifggkrrvrissqslkramrksgyyaqnigesslrtihlaqlrdvlrqklgerfdqkiidktlallsgksvdeaekisadAVtpwvvgeiawfceqvakaeadnlddkkllkvlkediaairvnlqqgvdialsgrMaTsgmmtelgkvdgamsiahaitthqvdsdidWFtavddlqeqgSaHLgtqefssgvfyryaninlaqlqenlggasreqaleiathvvhmlatevpgakqrtyaafnpadmvmvnfsdmplsmanafekavkakdgflqpsiqafnqywdrvangyglngaaaqfslsdvdpitaqvkqmptleqlkswvrnnge/snfinihvlishspsclnrddmnmqkdaifggkrrvrissqslkramrksgyyaqnigesslrtihlaqlrdvlrqklgerfdqkiidktlallsgksvdeaekisadAvtpwvvgeiawfceqvakaeadnlddkkllkvlkediaairvnlqqgvdialsgrMaTsgmmtelgkvdgamsiahaitthqvdsdidwFtAvddlqeQgSaHLgtqefssgvfyryaninlaqlqenlggasreqaleiathvvhmlatevpgakqrtyaafnpadmvmvnfsdmplsmanafekavkakdgflqpsiqafnqywdrvangyglngaaaqfslsqvkqmptleqlkswvrnnge/snfinihvlishspsclnrddmnmqkdaifggkrrvrissqslkramrksgyyaqnigesslrtihlaqlrdvlrqklgerfdqkiidktlallsgksvdeaekisadAvtpwvvgeiawfceqvakaeadnlddkkllkvlkediaairvnlqqgvdialsgrmaTsgmmtelgkvdgamsiahaitthqvdsdidwFtavddlqeQgSaHLgtqefssgvfyryaninlaqlqenlggasreqaleiathvvhmlatevpgakqrtyaafnpadmvmvnfsdmplsmanafekavkakdgflqpsiqafnqywdrvangyglngaaaqfslsvkqmptleqlkswvrnng/snfinihvlishspsclnrddmnmqkdaifggkrrvrissqslkramrksgyyaqnigesslrtihlaqlrdvlrqklgerfdqkiidktlallsgsadavtpwvvgeiawfceqvakaeadnlddkkllkvlkediaairvnlqqgvdialsgrmatsgmmtelgkvdgamsiahaitthqvdsdidWftavddlqeQgSaHLgTqefssgvfyryaninlaqlqenlggasreqaleiathvvhmlatevpgakqrtyaafnpadmvmvnfsdmplsmanafekavkakdgflqpsiqafnqywdrvangyglngaaaqfslsdvdpitaqvkqmptleqlkswvrnng/mrsylilrlagpmqawgqptfegtrptgrfptrsgllgllgaclgiqrddtsslqalsesvqfavrcdelilddrrvsvtglrdYhtvlgaredyrglksheTiQtwreylcdasftvalwltphatmviselekavlkprytpylgrrscplthplflgtcqasdpqkallnyepvggdiyseesvtghhlkftardepmitlprqfasrewyvikgg >5h9e_C: title=CRYSTAL STRUCTURE OF E. COLI CASCADE BOUND TO A PAM-CONTAINING DSDNA TARGET (32-NT SPACER) AT 3.20 ANGSTROM RESOLUTION. organism=? DNA sequence DA(N22):DT(M29) DA(N23):DT(M28) DC(N24):DA(M27) DA(N25):DT(M26) DA(N26):DT(M25) DT(N27):DT(M24) DA(N28):DA(M23) DC(N29):DT(M22) DC(N30):DT(M21) DG(N31):DT(M20) DT(N32):DT(M19) DC(N33):DG(M18) DA(N34):DT(M17) DT(N35):DA(M16) DC(N36):DG(M15) DG(N37):DC(M14) DA(N38):DT(M13) DG(N39):DC(M12) DC(N40):DG(M11) chainC ( 77) THR83 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) SER86 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG89 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) GLU144 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) GLN147 3 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) ASP151 0 17 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) LEU154 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) THR155 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence deidamalyrawqqldngscaqirrvsepdelrdipafyrlvqpfgwenprhqqallrmvfclsagknvirhqdkkTgiSlgRalansgrinerrifqliradrtadmvqlrrllthaepvldwplmarmltwwgkrErqQlleDfvLTt >5h9f_ACI: title=CRYSTAL STRUCTURE OF E. COLI CASCADE BOUND TO A PAM-CONTAINING DSDNA TARGET AT 2.45 ANGSTROM RESOLUTION. organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(M1):DA(N50) DC(M2):DG(N49) DT(M3):DA(N48) DG(M4):DC(N47) DT(M5):DA(N46) DG(M6):DC(N45) DC(M7):DG(N44) DA(M8):DT(N43) DG(M9):DC(N42) DT(M10):DA(N41) DG(M11):DC(N40) DC(M12):DG(N39) DT(M13):DA(N38) DC(M14):DG(N37) DG(M15):DC(N36) DA(M16):DT(N35) DT(M17):DA(N34) DG(M18):DC(N33) DT(M19):DT(N32) DT(M20):DG(N31) DT(M21):DC(N30) DT(M22):DC(N29) DA(M23):DA(N28) DT(M24):DT(N27) DT(M25):DA(N26) DT(M26):DA(N25) DA(M27):DC(N24) DT(M28):DA(N23) chainA (263) LYS268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 (296) THR301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 (297) THR302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 4 0 0 0 0 0 (348) GLN354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 12 0 0 0 0 0 0 0 0 0 (349) ALA355 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (379) ARG393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 (383) TYR397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 (384) THR398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (387) GLU401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 (394) PHE408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 (402) HIS416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 (403) GLU417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 2 0 0 0 0 0 (458) HIS472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 (459) PRO473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (467) LEU481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 chainC (148) LEU154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 chainI (189) TRP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (199) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 (201) SER211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (203) HIS213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 (204) LEU214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 12 0 0 0 (206) THR216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence nllidnwipvrprnggkvqiinlqslycsrdqwrlslprddmelaalallvcigqiiapakddvefrhrimnpltedefqqliapwidmfylnhaehpfmqtkgvkandvtpmekllagvsgatncafvnqpgqgealcggctaialfnqanqapgfgggfksglrggtpvttfvrgidlrstvllnvltlprlqkqfptenqptwikpiksnesipassigfvrglfwqpahielcdpigigkcsccgqesnlrytgflkeKftftvnglwphphspclvtvkkgeveekflafTTsapswtqisrvvvdkiiqnegnrvaavvnqfrniapqsplelimggyrnnQAsilerrhdvlmgnvineivtvglgyktalRkalYTfaEgfknkdFkgagvsvHEtaerhfyrqsellipdvlanvnfsqadeviadlrdklhqlcemlfnqsvapyahHPklistlaLaratlykhlrelkp/deidamalyrawqqldngscaqirrvsepdelrdipafyrlvqpfgwenprhqqallrmvfclsagknvirhqdkktgislgralansgrinerrifqliradrtadmvqlrrllthaepvldwplmarmltwwgkrerqqlledfvLtt/snfinihvlishspsclnrddmnmqkdaifggkrrvrissqslkramrksgyyaqnigesslrtihlaqlrdvlrqklgerfdqkiidktlallsgsadavtpwvvgeiawfceqvakaeadnlddkkllkvlkediaairvnlqqgvdialsgrmatsgmmtelgkvdgamsiahaitthqvdsdidWftavddlqeQgSaHLgTqefssgvfyryaninlaqlqenlggasreqaleiathvvhmlatevpgakqrtyaafnpadmvmvnfsdmplsmanafekavkakdgflqpsiqafnqywdrvangyglngaaaqfslsdvdpitaqvkqmptleqlkswvrnng >5h9f_BDEFGHJ: title=CRYSTAL STRUCTURE OF E. COLI CASCADE BOUND TO A PAM-CONTAINING DSDNA TARGET AT 2.45 ANGSTROM RESOLUTION. organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(N1) DT(N2) DG(N3) DT(N4) DT(N5) DG(N6) DG(N7) DC(N8) DA(N9) DA(N10) DG(N11) DC(N12) DC(N13) DA(N14) DG(N15) DG(N16) DA(N17) DT(N18) DC(N19) DT(N20) DG(N21) DA(N22) DA(N23) DC(N24) DA(N25) DA(N26) DT(N27) DA(N28) DC(N29) DC(N30) DG(N31) DT(N32) DC(N33) DA(N34) DT(N35) DC(N36) DG(N37) DA(N38) DG(N39) DC(N40) DA(N41) DC(N42) DT(N43) DG(N44) DC(N45) DA(N46) DC(N47) DA(N48) DG(N49) DA(N50) chainB ( 21) ALA23 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLN24 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG27 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) ARG101 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) HIS123 0 0 0 0 0 0 0 0 43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (109) ALA110 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) MET166 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) THR168 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (109) ALA110 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) MET166 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) THR168 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) TRP199 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER211 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) HIS213 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) LEU214 0 7 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (109) ALA110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) MET166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) TRP199 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) PHE200 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER211 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) HIS213 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) LEU214 0 0 0 0 0 0 0 12 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (109) ALA110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) MET166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) PHE200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER211 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) HIS213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) LEU214 0 0 0 0 0 0 0 0 0 0 0 0 0 14 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (109) ALA110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) PHE200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) HIS213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) LEU214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 85) TYR85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) THR103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) GLN105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence deidamalyrawqqldngscAQirRvsepdelrdipafyrlvqpfgwenprhqqallrmvfclsagknvirhqdkktgislgralansgrinerRifqliradrtadmvqlrrlltHaepvldwplmarmltwwgkrerqqlledfvlttnkn/snfinihvlishspsclnrddmnmqkdaifggkrrvrissqslkramrksgyyaqnigesslrtihlaqlrdvlrqklgerfdqkiidktlallsgksvdeaekisadAvtpwvvgeiawfceqvakaeadnlddkkllkvlkediaairvnlqqgvdialsgrMaTsgmmtelgkvdgamsiahaitthqvdqefssgvfyryaninlaqlqenlggasreqaleiathvvhmlatevpgdmvmvnfsdmplsmanafekavkakdgflqpsiqafnqywdrvangyglngaaaqfslsvkqmptleqlkswvrnng/snfinihvlishspsclnrddmnmqkdaifggkrrvrissqslkramrksgyyaqnigesslrtihlaqlrdvlrqklgerfdqkiidktlallsgksvdeaekisadAvtpwvvgeiawfceqvakaeadnlddkkllkvlkediaairvnlqqgvdialsgrMaTsgmmtelgkvdgamsiahaitthqvdsdidWftavddlqeqgSaHLgtqefssgvfyryaninlaqlqenlggasreqaleiathvvhmlatevpgakqrtyaafnpadmvmvnfsdmplsmanafekavkakdgflqpsiqafnqywdrvangyglngaaaqfsltaqvkqmptleqlkswvrnng/snfinihvlishspsclnrddmnmqkdaifggkrrvrissqslkramrksgyyaqnigesslrtihlaqlrdvlrqklgerfdqkiidktlallsgksvdeaekisadAvtpwvvgeiawfceqvakaeadnlddkkllkvlkediaairvnlqqgvdialsgrMaTsgmmtelgkvdgamsiahaitthqvdsdidWFtavddlqeqgSaHLgtqefssgvfyryaninlaqlqenlggasreqaleiathvvhmlatevpgakqrtyaafnpadmvmvnfsdmplsmanafekavkakdgflqpsiqafnqywdrvangyglngaaaqfslsdvdpitaqvkqmptleqlkswvrnnge/snfinihvlishspsclnrddmnmqkdaifggkrrvrissqslkramrksgyyaqnigesslrtihlaqlrdvlrqklgerfdqkiidktlallsgksvdeaekisadAvtpwvvgeiawfceqvakaeadnlddkkllkvlkediaairvnlqqgvdialsgrMaTsgmmtelgkvdgamsiahaitthqvdsdidwFtavddlqeQgSaHLgtqefssgvfyryaninlaqlqenlggasreqaleiathvvhmlatevpgakqrtyaafnpadmvmvnfsdmplsmanafekavkakdgflqpsiqafnqywdrvangyglngaaaqfslsqvkqmptleqlkswvrnnge/snfinihvlishspsclnrddmNmqkdaifggkrrvrissqslkramrksgyyaqnigesslrtihlaqlrdvlrqklgerfdqkiidktlallsgksvdeaekisadAvtpwvvgeiawfceqvakaeadnlddkkllkvlkediaairvnlqqgvdialsgrmaTsgmmtelgkvdgamsiahaitthqvdsdidwFtavddlqeQgSaHLgtqefssgvfyryaninlaqlqenlggasreqaleiathvvhmlatevpgakqrtyaafnpadmvmvnfsdmplsmanafekavkakdgflqpsiqafnqywdrvangyglngaaaqfslsvkqmptleqlkswvrnng/mrsylilrlagpmqawgqptfegtrptgrfptrsgllgllgaclgiqrddtsslqalsesvqfavrcdelilddrrvsvtglrdYhtvlgaredyrglksheTiQtwreylcdasftvalwltphatmviselekavlkprytpylgrrscplthplflgtcqasdpqkallnyepvggdiyseesvtghhlkftardepmitlprqfasrewyvikgg >5h9f_G: title=CRYSTAL STRUCTURE OF E. COLI CASCADE BOUND TO A PAM-CONTAINING DSDNA TARGET AT 2.45 ANGSTROM RESOLUTION. organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(N1) DT(N2) DG(N3) DT(N4) DT(N5) DG(N6) DG(N7) DC(N8) DA(N9) DA(N10) DG(N11) DC(N12) DC(N13) DA(N14) DG(N15) DG(N16) DA(N17) DT(N18) DC(N19) DT(N20) DG(N21) DA(N22) DA(N23) DC(N24) DA(N25) DA(N26) DT(N27) DA(N28) DC(N29) DC(N30) DG(N31) DT(N32) DC(N33) DA(N34) DT(N35) DC(N36) DG(N37) DA(N38) DG(N39) DC(N40) DA(N41) DC(N42) DT(N43) DG(N44) DC(N45) DA(N46) DC(N47) DA(N48) DG(N49) DA(N50) chainG (109) ALA110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) MET166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) PHE200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN209 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER211 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) HIS213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) LEU214 0 0 0 0 0 0 0 0 0 0 0 0 0 14 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence snfinihvlishspsclnrddmnmqkdaifggkrrvrissqslkramrksgyyaqnigesslrtihlaqlrdvlrqklgerfdqkiidktlallsgksvdeaekisadAvtpwvvgeiawfceqvakaeadnlddkkllkvlkediaairvnlqqgvdialsgrMaTsgmmtelgkvdgamsiahaitthqvdsdidwFtavddlqeQgSaHLgtqefssgvfyryaninlaqlqenlggasreqaleiathvvhmlatevpgakqrtyaafnpadmvmvnfsdmplsmanafekavkakdgflqpsiqafnqywdrvangyglngaaaqfslsqvkqmptleqlkswvrnnge >5haw_A:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURES OF THE NO FACTOR SLMA BOUND TO DNA AND THE CYTOSKELETAL CELL DIVISION PROTEIN FTSZ organism=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) / Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) DNA sequence DG(Z23) DT(Z24) DG(Z25) DA(Z26) DG(Z27) DT(Z28) DA(Z29) DC(Z30) DT(Z31) DC(Z32) DA(Z33) DC(Z34) chainA ( 26) THR32 0 0 0 0 0 0 3 1 0 0 0 0 ( 37) GLU43 0 0 0 0 0 0 2 8 0 0 0 0 ( 38) ALA44 0 0 0 0 0 0 0 0 3 1 0 0 ( 41) TYR47 0 0 0 0 0 0 0 7 4 0 0 0 ( 42) ARG48 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence inrreeilqalaemlesnegasritTaklakqvgvsEAalYRhfpsktrmfegliefieeslmsrinrifdeekdtlnrirlvmqlllafaernpgltrilsghalmfenerlrdrinqlferietslrqilrerkksfpvdenilaaqllgqvegslnrfvrsdfkylptanfdeywallsaqik >5haw_AB:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURES OF THE NO FACTOR SLMA BOUND TO DNA AND THE CYTOSKELETAL CELL DIVISION PROTEIN FTSZ organism=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) / Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) / Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) / Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) DNA sequence DG(Z23) DT(Z24) DG(Z25) DA(Z26) DG(Z27) DT(Z28) DA(Z29) DC(Z30) DT(Z31) DC(Z32) DA(Z33) DC(Z34) chainA ( 26) THR32 0 0 0 0 0 0 3 1 0 0 0 0 ( 37) GLU43 0 0 0 0 0 0 2 8 0 0 0 0 ( 38) ALA44 0 0 0 0 0 0 0 0 3 1 0 0 ( 41) TYR47 0 0 0 0 0 0 0 7 4 0 0 0 ( 42) ARG48 0 0 0 0 0 0 0 0 0 0 1 0 chainB ( 36) GLU43 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence inrreeilqalaemlesnegasritTaklakqvgvsEAalYRhfpsktrmfegliefieeslmsrinrifdeekdtlnrirlvmqlllafaernpgltrilsghalmfenerlrdrinqlferietslrqilrerkksfpvdenilaaqllgqvegslnrfvrsdfkylptanfdeywallsaqik/nrreeilqalaemlesnegasrittaklakqvgvsEaalyrhfpsktrmfegliefieeslmsrinrifdeekdtlnrirlvmqlllafaernpgltrilsghalmfenerlrdrinqlferietslrqilrerklregksfpvdenilaaqllgqvegslnrfvrsdfkylptanfdeywallsaqik >5hbu_ABCD:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF THE E. COLI NUCLEOID OCCLUSION PROTEIN SLMA BOUND TO DNA AND THE C-TERMINAL TAIL OF THE CYTOSKELETAL CELL DIVISION PROTEIN FTSZ organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DG(Z23):DC(W13) DT(Z24):DA(W12) DG(Z25):DC(W11) DA(Z26):DT(W10) DG(Z27):DC(W9) DT(Z28):DA(W8) DA(Z29):DT(W7) DC(Z30):DG(W6) DT(Z31):DA(W5) DC(Z32):DG(W4) DA(Z33):DT(W3) DC(Z34):DG(W2) chainA ( 26) THR34 0 0 0 0 0 0 4 1 0 0 0 0 ( 36) SER44 0 0 0 0 0 0 0 0 0 0 4 0 ( 37) GLU45 0 0 0 0 0 0 1 6 0 0 0 0 ( 38) ALA46 0 0 0 0 0 0 0 0 1 3 6 0 ( 39) ALA47 0 0 0 0 0 0 0 0 0 0 1 0 ( 41) TYR49 0 0 0 0 0 0 0 9 3 0 0 0 ( 42) ARG50 0 0 0 0 0 0 0 0 0 0 1 18 chainB ( 32) THR34 1 9 0 0 0 0 0 0 0 0 0 0 ( 43) GLU45 8 6 0 0 0 0 0 0 0 0 0 0 ( 47) TYR49 10 0 0 0 0 0 0 0 0 0 0 0 chainC ( 26) THR34 0 0 0 0 1 2 0 0 0 0 0 0 ( 36) SER44 0 4 0 0 0 0 0 0 0 0 0 0 ( 37) GLU45 0 0 0 0 7 1 0 0 0 0 0 0 ( 38) ALA46 0 5 4 2 0 0 0 0 0 0 0 0 ( 39) ALA47 0 1 0 0 0 0 0 0 0 0 0 0 ( 41) TYR49 0 0 0 4 8 0 0 0 0 0 0 0 ( 42) ARG50 14 0 0 0 0 0 0 0 0 0 0 0 chainD ( 25) THR34 0 0 0 0 0 0 0 0 0 0 5 3 ( 36) GLU45 0 0 0 0 0 0 0 0 0 0 1 7 ( 40) TYR49 0 0 0 0 0 0 0 0 0 0 0 11 prot.sequence rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq/aekqakrnrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq/rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq/nrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq >5hbu_EGH:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF THE E. COLI NUCLEOID OCCLUSION PROTEIN SLMA BOUND TO DNA AND THE C-TERMINAL TAIL OF THE CYTOSKELETAL CELL DIVISION PROTEIN FTSZ organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DG(T23):DC(R13) DT(T24):DA(R12) DG(T25):DC(R11) DA(T26):DT(R10) DG(T27):DC(R9) DT(T28):DA(R8) DA(T29):DT(R7) DC(T30):DG(R6) DT(T31):DA(R5) DC(T32):DG(R4) DA(T33):DT(R3) DC(T34):DG(R2) chainE ( 26) THR34 0 0 0 0 1 3 0 0 0 0 0 0 ( 36) SER44 0 3 1 0 0 0 0 0 0 0 0 0 ( 37) GLU45 0 0 0 0 8 2 0 0 0 0 0 0 ( 38) ALA46 0 4 2 1 0 0 0 0 0 0 0 0 ( 39) ALA47 0 1 0 0 0 0 0 0 0 0 0 0 ( 41) TYR49 0 0 0 3 9 0 0 0 0 0 0 0 ( 42) ARG50 18 6 0 0 0 0 0 0 0 0 0 0 chainG ( 26) THR34 0 0 0 0 0 0 4 1 0 0 0 0 ( 36) SER44 0 0 0 0 0 0 0 0 0 0 3 0 ( 37) GLU45 0 0 0 0 0 0 2 10 0 0 0 0 ( 38) ALA46 0 0 0 0 0 0 0 0 2 2 4 0 ( 41) TYR49 0 0 0 0 0 0 0 9 4 0 0 0 ( 42) ARG50 0 0 0 0 0 0 0 0 0 0 1 10 chainH ( 26) THR34 1 4 0 0 0 0 0 0 0 0 0 0 ( 37) GLU45 10 3 0 0 0 0 0 0 0 0 0 0 ( 41) TYR49 12 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq/rnrreeilqslalmlessdgsqritTaklaasvgvSEAalYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq/rnrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq >5hbu_G:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF THE E. COLI NUCLEOID OCCLUSION PROTEIN SLMA BOUND TO DNA AND THE C-TERMINAL TAIL OF THE CYTOSKELETAL CELL DIVISION PROTEIN FTSZ organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DG(T23):DC(R13) DT(T24):DA(R12) DG(T25):DC(R11) DA(T26):DT(R10) DG(T27):DC(R9) DT(T28):DA(R8) DA(T29):DT(R7) DC(T30):DG(R6) DT(T31):DA(R5) DC(T32):DG(R4) DA(T33):DT(R3) DC(T34):DG(R2) chainG ( 26) THR34 0 0 0 0 0 0 4 1 0 0 0 0 ( 36) SER44 0 0 0 0 0 0 0 0 0 0 3 0 ( 37) GLU45 0 0 0 0 0 0 2 10 0 0 0 0 ( 38) ALA46 0 0 0 0 0 0 0 0 2 2 4 0 ( 41) TYR49 0 0 0 0 0 0 0 9 4 0 0 0 ( 42) ARG50 0 0 0 0 0 0 0 0 0 0 1 10 prot.sequence rnrreeilqslalmlessdgsqritTaklaasvgvSEAalYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq >5hch_A:Calcium-mediated_lectin; title=X-RAY STRUCTURE OF A LECTIN-BOUND DNA DUPLEX CONTAINING AN UNNATURAL PHENANTHRENYL PAIR organism=Pseudomonas aeruginosa DNA sequence DG(E14):DC(B13) DC(E15):DG(B12) DG(E16):DC(B11) DA(E17):DT(B10) DT(E18):DA(B9) DA(E19):DT(B8) 61H(E20):61H(B7) DA(E21):DT(B6) DA(E22):DT(B5) DT(E23):DA(B4) DG(E24):DC(B3) DC(E25):DG(B2) DG(E26):DC(B1) chainA ( 45) THR45 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence atqgvftlpantrfgvtafanssgtqtvnvlvnnetaatfsgqsTnnavigtqvlnsgssgkvqvqvsvngrpsdlvsaqviltnelnfalvgsedgtdndyndavvvinwplg >5hdn_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HEAT SHOCK FACTOR1-DBD COMPLEX WITH DS-DNA AND TTT organism=HOMO SAPIENS DNA sequence DG(G1):DC(H12) DG(G2):DC(H11) DT(G3):DA(H10) DT(G4):DA(H9) DC(G5):DG(H8) DT(G6):DA(H7) DA(G7):DT(H6) DG(G8):DC(H5) DA(G9):DT(H4) DA(G10):DT(H3) DC(G11):DG(H2) DC(G12):DG(H1) chainC ( 51) LYS62 0 0 2 1 0 0 0 0 0 0 0 0 ( 52) HIS63 20 15 6 0 0 0 0 0 0 0 0 0 prot.sequence hhhvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfKHnnmasfvrqlnmygfrkvvhieqgglvkperddtefqhpcflrgqeqllenikrk >5hf7_A:Uracil-DNA_glycosylase-like; title=TDG ENZYME-SUBSTRATE COMPLEX organism=Homo sapiens DNA sequence DA(D1):DT(C28) DG(D2):DC(C27) DC(D3):DG(C26) DT(D4):DA(C25) DG(D5):DC(C24) DT(D6):DA(C23) DC(D7):DG(C22) DC(D8):DG(C21) DA(D9):DT(C20) DT(D10):DA(C19) DC(D11):DG(C18) DG(D12):DC(C17) DC(D13):DG(C16) DT(D14):DA(C15) DC(D15):DG(C14) DA(D16):DT(C13) DG(D18):DC(C11) DT(D19):DA(C10) DA(D20):DT(C9) DC(D21):DG(C8) DA(D22):DT(C7) DG(D23):DC(C6) DA(D24):DT(C5) DG(D25):DC(C4) DC(D26):DG(C3) DT(D27):DA(C2) DG(D28):DC(C1) chainA ( 94) SER200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 95) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 7 0 0 0 0 0 0 0 0 (168) ALA274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (169) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 0 0 0 0 0 0 0 0 0 0 (170) CYS276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (171) ALA277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (172) GLN278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 prot.sequence kvdrfngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnHfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARCAQfpraqdkvhyyiklkdlrdqlkgie >5hhh_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA HOST-GUEST COMPLEXED WITH THE CONTROL G FOR N7-CBZ-PLATINATION organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 26) HIS34 37 0 0 0 0 ( 27) LYS35 8 0 0 0 0 ( 30) ALA38 4 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5hhi_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA HOST-GUEST COMPLEXED WITH CBZ- PLATINATED N7-G organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 37 0 0 0 0 ( 29) LYS35 8 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5hlf_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A 38-MER HAIRPIN TEMPLATE-PRIMER DNA APTAMER AND AN ALPHA-CARBOXYPHOSPHONATE INHIBITOR organism=? DNA sequence DC(F1):DG(F33) OMC(F2):DG(F32) DC(F3):DG(F31) OMC(F4):DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) chainA ( 89) GLU89 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 12 3 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglttpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvRqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5hlf_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A 38-MER HAIRPIN TEMPLATE-PRIMER DNA APTAMER AND AN ALPHA-CARBOXYPHOSPHONATE INHIBITOR organism=? DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainC ( 89) GLU89 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwgpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwy >5hlg_AC:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF REDUCED ABFR BOUND TO DNA organism=Staphylococcus epidermidis DNA sequence DA(L3):DT(K24) DC(L4):DG(K23) DT(L5):DA(K22) DC(L6):DG(K21) DA(L7):DT(K20) DA(L8):DT(K19) DT(L9):DA(K18) DC(L10):DG(K17) DG(L11):DC(K16) DC(L12):DG(K15) DG(L13):DC(K14) DC(L14):DG(K13) DG(L15):DC(K12) DC(L16):DG(K11) DG(L17):DC(K10) DA(L18):DT(K9) DT(L19):DA(K8) DT(L20):DA(K7) DG(L21):DC(K6) DA(L22):DT(K5) DG(L23):DC(K4) DT(L24):DA(K3) DT(I1):DA(K2) DA(I2):DT(K1) DA(I3):DT(J24) DC(I4):DG(J23) DT(I5):DA(J22) DC(I6):DG(J21) DA(I7):DT(J20) DA(I8):DT(J19) DT(I9):DA(J18) DC(I10):DG(J17) DG(I11):DC(J16) DC(I12):DG(J15) DG(I13):DC(J14) DC(I14):DG(J13) DG(I15):DC(J12) DC(I16):DG(J11) DG(I17):DC(J10) DA(I18):DT(J9) DT(I19):DA(J8) DT(I20):DA(J7) DG(I21):DC(J6) DA(I22):DT(J5) DG(I23):DC(J4) DT(I24):DA(J3) chainA ( 64) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 15 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 63) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 15 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) THR68 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qeqmrlanqlcfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTpmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaisscletkyvfeeleqtlkhliek/eqmrlanqlcfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTpmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclydetkyvfeeleqtlkhlie >5hlg_E:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF REDUCED ABFR BOUND TO DNA organism=Staphylococcus epidermidis DNA sequence DA(N3):DT(M24) DC(N4):DG(M23) DT(N5):DA(M22) DC(N6):DG(M21) DA(N7):DT(M20) DA(N8):DT(M19) DT(N9):DA(M18) DC(N10):DG(M17) DG(N11):DC(M16) DC(N12):DG(M15) DG(N13):DC(M14) DC(N14):DG(M13) DG(N15):DC(M12) DC(N16):DG(M11) DG(N17):DC(M10) DA(N18):DT(M9) DT(N19):DA(M8) DT(N20):DA(M7) DG(N21):DC(M6) DA(N22):DT(M5) DG(N23):DC(M4) DT(N24):DA(M3) chainE ( 67) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 0 0 ( 68) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 15 10 5 0 0 0 0 0 0 ( 69) THR68 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 ( 71) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 72) PRO71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 93) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 0 prot.sequence nmkqeqmrlanqlcfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaisscldetkyvfeeleqtlkhlie >5hlg_FH:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF REDUCED ABFR BOUND TO DNA organism=Staphylococcus epidermidis DNA sequence DA(O3):DT(P24) DC(O4):DG(P23) DT(O5):DA(P22) DC(O6):DG(P21) DA(O7):DT(P20) DA(O8):DT(P19) DT(O9):DA(P18) DC(O10):DG(P17) DG(O11):DC(P16) DC(O12):DG(P15) DG(O13):DC(P14) DC(O14):DG(P13) DG(O15):DC(P12) DC(O16):DG(P11) DG(O17):DC(P10) DA(O18):DT(P9) DT(O19):DA(P8) DT(O20):DA(P7) DG(O21):DC(P6) DA(O22):DT(P5) DG(O23):DC(P4) DT(O24):DA(P3) DT(N1):DA(P2) DA(N2):DT(P1) DA(N3):DT(M24) DC(N4):DG(M23) DT(N5):DA(M22) DC(N6):DG(M21) DA(N7):DT(M20) DA(N8):DT(M19) DT(N9):DA(M18) DC(N10):DG(M17) DG(N11):DC(M16) DC(N12):DG(M15) DG(N13):DC(M14) DC(N14):DG(M13) DG(N15):DC(M12) DC(N16):DG(M11) DG(N17):DC(M10) DA(N18):DT(M9) DT(N19):DA(M8) DT(N20):DA(M7) DG(N21):DC(M6) DA(N22):DT(M5) DG(N23):DC(M4) DT(N24):DA(M3) chainF ( 67) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 15 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) PRO71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 66) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 14 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR68 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) PRO71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nmkqeqmrlanqlcfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclydetkyvfeeleqtlkhlie/mkqeqmrlanqlcfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclpydetkyvfeeleqtlkhlie >5hlh_AC:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE OVEROXIDIZED ABFR BOUND TO DNA organism=Staphylococcus epidermidis DNA sequence DA(J3):DT(I24) DC(J4):DG(I23) DT(J5):DA(I22) DC(J6):DG(I21) DA(J7):DT(I20) DA(J8):DT(I19) DT(J9):DA(I18) DC(J10):DG(I17) DG(J11):DC(I16) DC(J12):DG(I15) DG(J13):DC(I14) DC(J14):DG(I13) DG(J15):DC(I12) DC(J16):DG(I11) DG(J17):DC(I10) DA(J18):DT(I9) DT(J19):DA(I8) DT(J20):DA(I7) DG(J21):DC(I6) DA(J22):DT(I5) DG(J23):DC(I4) DT(J24):DA(I3) DT(K1):DA(I2) DA(K2):DT(I1) DA(K3):DT(L24) DC(K4):DG(L23) DT(K5):DA(L22) DC(K6):DG(L21) DA(K7):DT(L20) DA(K8):DT(L19) DT(K9):DA(L18) DC(K10):DG(L17) DG(K11):DC(L16) DC(K12):DG(L15) DG(K13):DC(L14) DC(K14):DG(L13) DG(K15):DC(L12) DC(K16):DG(L11) DG(K17):DC(L10) DA(K18):DT(L9) DT(K19):DA(L8) DT(K20):DA(L7) DG(K21):DC(L6) DA(K22):DT(L5) DG(K23):DC(L4) DT(K24):DA(L3) chainA ( 63) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 17 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) THR68 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) PRO71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 62) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 17 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PRO71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qeqmrlanqlfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaisscydetkyvfeeleqtlkhliek/eqmrlanqlfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkRleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclydetkyvfeeleqtlkhli >5hlh_D:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE OVEROXIDIZED ABFR BOUND TO DNA organism=Staphylococcus epidermidis DNA sequence DA(K3):DT(L24) DC(K4):DG(L23) DT(K5):DA(L22) DC(K6):DG(L21) DA(K7):DT(L20) DA(K8):DT(L19) DT(K9):DA(L18) DC(K10):DG(L17) DG(K11):DC(L16) DC(K12):DG(L15) DG(K13):DC(L14) DC(K14):DG(L13) DG(K15):DC(L12) DC(K16):DG(L11) DG(K17):DC(L10) DA(K18):DT(L9) DT(K19):DA(L8) DT(K20):DA(L7) DG(K21):DC(L6) DA(K22):DT(L5) DG(K23):DC(L4) DT(K24):DA(L3) chainD ( 65) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 6 0 0 0 0 ( 66) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 14 10 5 0 0 0 0 0 0 ( 67) THR68 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 ( 69) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 91) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 prot.sequence mkqeqmrlanqlfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTpmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclpdetkyvfeeleqtlkhli >5hlh_FH:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE OVEROXIDIZED ABFR BOUND TO DNA organism=Staphylococcus epidermidis DNA sequence DA(O3):DT(P24) DC(O4):DG(P23) DT(O5):DA(P22) DC(O6):DG(P21) DA(O7):DT(P20) DA(O8):DT(P19) DT(O9):DA(P18) DC(O10):DG(P17) DG(O11):DC(P16) DC(O12):DG(P15) DG(O13):DC(P14) DC(O14):DG(P13) DG(O15):DC(P12) DC(O16):DG(P11) DG(O17):DC(P10) DA(O18):DT(P9) DT(O19):DA(P8) DT(O20):DA(P7) DG(O21):DC(P6) DA(O22):DT(P5) DG(O23):DC(P4) DT(O24):DA(P3) DT(N1):DA(P2) DA(N2):DT(P1) DA(N3):DT(M24) DC(N4):DG(M23) DT(N5):DA(M22) DC(N6):DG(M21) DA(N7):DT(M20) DA(N8):DT(M19) DT(N9):DA(M18) DC(N10):DG(M17) DG(N11):DC(M16) DC(N12):DG(M15) DG(N13):DC(M14) DC(N14):DG(M13) DG(N15):DC(M12) DC(N16):DG(M11) DG(N17):DC(M10) DA(N18):DT(M9) DT(N19):DA(M8) DT(N20):DA(M7) DG(N21):DC(M6) DA(N22):DT(M5) DG(N23):DC(M4) DT(N24):DA(M3) chainF ( 65) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 65) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 13 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR68 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkqeqmrlanqlfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTpmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclydetkyvfeeleqtlkhlie/mkqeqmrlanqlfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclydetkyvfeeleqtlkhlie >5hlk_AB:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF THE TERNARY ECORV-DNA-LU COMPLEX WITH CLEAVED DNA SUBSTRATE. organism=Escherichia coli DNA sequence DA(D2):DT(E11) DA(D3):DT(E10) DG(D4):DC(E9) DA(D5):DT(E8) DT(D6):DA(E7) DA(F7):DT(C6) DT(F8):DA(C5) DC(F9):DG(C4) DT(F10):DA(C3) DT(F11):DA(C2) DT(F12):DA(C1) chainA ( 69) ASN70 0 0 0 0 0 1 7 5 0 0 0 (105) THR106 0 0 0 9 0 0 0 0 0 0 0 (182) SER183 0 0 4 7 0 0 0 0 0 0 0 (184) ASN185 0 0 19 10 0 0 0 0 0 0 0 (185) THR186 0 0 0 7 4 4 0 0 0 0 0 (187) ASN188 0 0 0 4 0 0 0 0 0 0 0 chainB ( 69) ASN70 0 1 4 5 1 0 0 0 0 0 0 (103) LYS104 0 0 0 0 0 0 0 0 2 0 0 (105) THR106 0 0 0 0 0 0 9 1 0 0 0 (182) SER183 0 0 0 0 0 0 7 4 0 0 0 (184) ASN185 0 0 0 0 0 0 11 16 0 0 0 (185) THR186 0 0 0 0 6 1 8 0 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekikfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk/slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >5hlk_B:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF THE TERNARY ECORV-DNA-LU COMPLEX WITH CLEAVED DNA SUBSTRATE. organism=Escherichia coli DNA sequence DA(D2):DT(E11) DA(D3):DT(E10) DG(D4):DC(E9) DA(D5):DT(E8) DT(D6):DA(E7) DA(F7):DT(C6) DT(F8):DA(C5) DC(F9):DG(C4) DT(F10):DA(C3) DT(F11):DA(C2) DT(F12):DA(C1) chainB ( 69) ASN70 0 1 4 5 1 0 0 0 0 0 0 (103) LYS104 0 0 0 0 0 0 0 0 2 0 0 (105) THR106 0 0 0 0 0 0 9 1 0 0 0 (182) SER183 0 0 0 0 0 0 7 4 0 0 0 (184) ASN185 0 0 0 0 0 0 11 16 0 0 0 (185) THR186 0 0 0 0 6 1 8 0 0 0 0 (187) ASN188 0 0 0 0 0 0 4 0 0 0 0 prot.sequence slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyiveepkqqNhypdftlykpsepnkkiaidikttytnkenekiKfTlggytsfirnntknivypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdlagSgNTtNigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk >5hlt_A: title=CRYSTAL STRUCTURE OF PYRENE- AND PHENANTHRENE-MODIFIED DNA IN COMPLEX WITH THE BPUJ1 ENDONUCLEASE BINDING DOMAIN organism=Bacillus pumilus DNA sequence DT(C103):DA(D210) DA(C104):DT(D209) DC(C105):DG(D208) DC(C106):DG(D207) DC(C107):DG(D206) DG(C108):DC(D205) DT(C109):DA(D204) DG(C110):DC(D203) DG(C111):DC(D202) DA(C112):DT(D201) chainA ( 14) ARG15 0 0 0 0 24 11 12 0 0 0 ( 16) LYS17 0 0 0 0 3 0 0 0 0 0 ( 62) LYS63 0 6 6 9 0 0 0 0 0 0 ( 63) THR64 0 0 0 0 4 0 0 0 0 0 ( 66) ASN67 0 0 7 5 8 0 0 0 0 0 ( 70) GLU71 0 0 12 9 2 0 0 0 0 0 (120) LYS121 0 2 1 0 0 0 0 0 0 0 (201) GLU202 0 0 0 0 0 0 2 0 0 0 (202) THR203 0 0 0 0 0 0 0 0 1 4 (203) SER204 0 0 0 0 0 0 6 2 0 0 (207) GLN208 0 0 0 0 0 0 11 16 0 0 prot.sequence nynpeeqfrctiiRgKaknmldnllpayaniiddicpcdkasfvkdfnnrlieilgeettkKTldNhrtEiagklfgmfyeddevifpsgrtnkyiedsdqpaffkdicfkfqfpngmdKldkviekvgakiqirqfpyilqvlltadnnniqlskddiayyvlnslqvlqgkikpieviekiiedrsnditkkvrhpgkETSysmQhireqlnylelanliridgnlvklnyreaeninyiaqfwgnkpefnaykydftseddkksffkdwqqyysn >5hnf_A: title=CRYSTAL STRUCTURE OF PYRENE- AND PHENANTHRENE-MODIFIED DNA IN COMPLEX WITH THE BPUJ1 ENDONUCLEASE BINDING DOMAIN organism=Bacillus pumilus DNA sequence DT(M201):DA(L111) DC(M202):DG(L110) DC(M203):DG(L109) DA(M204):DT(L108) DC(M205):DG(L107) DG(M206):DC(L106) DG(M207):DC(L105) DG(M208):DC(L104) DT(M209):DA(L103) chainA ( 14) ARG15 0 0 0 11 11 23 0 0 0 ( 16) LYS17 0 0 0 0 1 4 0 0 0 ( 62) LYS63 0 0 0 0 0 1 13 8 6 ( 63) THR64 0 0 0 0 0 4 0 0 0 ( 66) ASN67 0 0 0 0 0 8 7 7 0 ( 69) THR70 0 0 0 0 0 0 0 1 0 ( 70) GLU71 0 0 0 0 0 3 10 11 0 (120) LYS121 0 0 0 0 0 0 0 8 5 (201) GLU202 0 0 0 2 0 0 0 0 0 (203) SER204 0 0 1 7 0 0 0 0 0 (207) GLN208 0 0 13 11 0 0 0 0 0 prot.sequence nynpeeqfrctiiRgKakNmldnllpayaniiddicpcdkasfvkdfnnrlieilgeettkKTldNhrTEiagklfgmfyeddevifpsgrtnkyiedsdqpaffkdicfkfqfpngmdKldkviekvgakiqirqfpyilqvlltadnnniqlskddiayyvlnslqvlqgkikpieviekiiedrsnditkkvrhpgkEtSysmQhireqlnylelanliridgnlvklnyreaeninyiaqfwgnkpefnaykydftseddkksffkdwqqyysnvn >5hnh_A: title=CRYSTAL STRUCTURE OF PYRENE- AND PHENANTHRENE-MODIFIED DNA IN COMPLEX WITH THE BPUJ1 ENDONUCLEASE BINDING DOMAIN organism=Bacillus pumilus DNA sequence DA(L103):DT(M209) DC(L104):DG(M208) DC(L105):DG(M207) DC(L106):DG(M206) DG(L107):DC(M205) DT(L108):DA(M204) DG(L109):DC(M203) DG(L110):DC(M202) DA(L111):DT(M201) chainA ( 14) ARG15 0 0 0 22 10 12 0 0 0 ( 16) LYS17 0 0 0 4 1 0 0 0 0 ( 62) LYS63 4 8 12 1 0 0 0 0 0 ( 63) THR64 0 0 0 4 0 0 0 0 0 ( 66) ASN67 0 7 6 7 0 0 0 0 0 ( 69) THR70 0 1 0 0 0 0 0 0 0 ( 70) GLU71 0 9 10 3 0 0 0 0 0 (120) LYS121 6 6 0 0 0 0 0 0 0 (201) GLU202 0 0 0 0 0 2 0 0 0 (203) SER204 0 0 0 0 0 7 3 0 0 (207) GLN208 0 0 0 0 0 11 9 0 0 prot.sequence nynpeeqfrctiiRgKakNmldnllpayaniiddicpcdkasfvkdfnnrlieilgeettkKTldNhrTEiagklfgmfyeddevifpsgrtnkyiedsdqpaffkdicfkfqfpngmdKldkviekvgakiqirqfpyilqvlltadnnniqlskddiayyvlnslqvlqgkikpieviekiiedrsnditkkvrhpgkEtSysmQhireqlnylelanliridgnlvklnyreaeninyiaqfwgnkpefnaykydftseddkksffkdwqqyysnv >5hnk_AB:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF T5FEN IN COMPLEX INTACT SUBSTRATE AND METAL IONS. organism=ESCHERICHIA PHAGE T5 DNA sequence DG(X5):DC(Y12) DC(X6):DG(Y11) DG(X7):DC(Y10) DT(X8):DA(Y9) DA(X9):DT(Y8) DC(X10):DG(Y7) DG(X11):DC(Y6) DC(X12):DG(Y5) chainA chainB ( 13) PHE32 0 0 0 0 0 0 0 51 ( 16) LYS35 0 0 0 0 0 0 0 9 (150) PHE169 0 0 0 0 0 0 0 3 (151) THR170 0 0 0 0 0 0 1 2 (183) LEU202 0 0 0 1 0 0 0 0 prot.sequence rnlmivdgtnlgfrfkhnnskkpfassyvstiqslaksysarttivlgdkgksvfrlehlpeykgnrdekyaqrteeekaldeqffeylkdafelckttfptftirgveaddmaayivklighlydhvwlistkgdwdtlltdkvsrfsfttrreyhlrdmyehhnvddveqfislkaimgdlgdnirgvegigakrgyniirefgnvldiidqlplpgkqkyiqnlnaseellfrnlilvdlptycvdaiaavgqdvldkftkdileiaeq/rnlmivdgtnlgFrfKhnnskkpfassyvstiqslaksysarttivlgdkgksvfrlehlpeykgnrdekyaqrteeekaldeqffeylkdafelckttfptftirgveaddmaayivklighlydhvwlisTkgdwdtlltdkvsrfsFTtrreyhlrdmyehhnvddveqfislkaimgdLgdnirgvegigakrgyniirefgnvldiidqlplpgkqkyiqnlnaseellfrnlilvdlptycvdaiaavgqdvldkftkdileiaeq >5hod_A:Homeodomain-like; title=STRUCTURE OF LHX4 TRANSCRIPTION FACTOR COMPLEXED WITH DNA organism=Homo sapiens DNA sequence DC(B2):DG(C39) DC(B3):DG(C38) DA(B5):DT(C36) DA(B6):DT(C35) DT(B7):DA(C34) DT(B8):DA(C33) DA(B9):DT(C32) DG(B10):DC(C31) DG(B11):DC(C30) DC(B12):DG(C29) DG(B13):DC(C28) DT(B14):DA(C27) DA(B15):DT(C26) DA(B16):DT(C25) DT(B17):DA(C24) DT(B18):DA(C23) DA(B19):DT(C22) DG(B20):DC(C21) chainA ( 6) ARG89 0 0 0 0 0 0 0 0 0 0 13 10 6 0 0 0 0 0 ( 48) VAL131 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 51) GLN134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 52) ASN135 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 prot.sequence gakrpRttitakqletlknayknspkparhvreqlssetgldmrvvqVwfQNrrakekrlk >5hod_AD:Homeodomain-like; title=STRUCTURE OF LHX4 TRANSCRIPTION FACTOR COMPLEXED WITH DNA organism=Homo sapiens DNA sequence DC(C21):DG(B20) DT(C22):DA(B19) DA(C23):DT(B18) DA(C24):DT(B17) DT(C25):DA(B16) DT(C26):DA(B15) DA(C27):DT(B14) DC(C28):DG(B13) DG(C29):DC(B12) DC(C30):DG(B11) DC(C31):DG(B10) DT(C32):DA(B9) DA(C33):DT(B8) DA(C34):DT(B7) DT(C35):DA(B6) DT(C36):DA(B5) DG(C38):DC(B3) DG(C39):DC(B2) chainA ( 6) ARG89 0 0 0 0 0 6 10 13 0 0 0 0 0 0 0 0 0 0 ( 48) VAL131 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN134 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ASN135 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 ( 41) ARG127 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 ( 45) VAL131 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 48) GLN134 0 0 0 0 0 0 0 0 0 0 0 5 1 1 0 0 0 0 ( 49) ASN135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 ( 51) ARG137 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 prot.sequence gakrpRttitakqletlknayknspkparhvreqlssetgldmrvvqVwfQNrrakekrlk/rpRttitakqletlknayknspkparhvreqlssetgldmRvvqVwfQNrRakekrlk >5hoo_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE MOS1 STRAND TRANSFER COMPLEX organism=Drosophila mauritiana DNA sequence DG(C4):DC(D53) DG(C5):DC(D52) DT(C6):DA(D51) DG(C7):DC(D50) DT(C8):DA(D49) DA(C9):DT(D48) DC(C10):DG(D47) DA(C11):DT(D46) DA(C12):DT(D45) DG(C13):DC(D44) DT(C14):DA(D43) DA(C15):DT(D42) DT(C16):DA(D41) DG(C17):DC(D40) DA(C18):DT(D39) DA(C19):DT(D38) DA(C20):DT(D37) DT(C21):DA(D36) DG(C22):DC(D35) DT(C23):DA(D34) DC(C24):DG(D33) DG(C25):DC(D32) DT(C26):DA(D31) DT(C27):DA(D30) DT(C28):DA(D29) chainA ( 42) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 8 0 0 0 ( 45) GLU47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 ( 46) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 9 1 0 0 0 0 0 ( 63) HIS65 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 1 0 0 0 0 0 0 0 0 0 ( 66) PRO68 0 0 0 0 0 0 0 0 0 0 1 5 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) SER99 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) GLN100 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) GLN101 0 0 0 0 0 7 8 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ALA102 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) SER104 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sfvpnkeqtrtvlifcfhlkktaaeshrmlveafgeqvptvKtcERwfqrfksgdfdvddkeHgkPpkryedaelqalldeddaqtqkqlaeqlevSQQAvSnrlremgkiqkvgrwvphelnerqmerrkntceillsrykrksflhrivtgdekwiffvnpkrkksyvdpgqpatstarpnrfgkktmlcvwwdqsgviyyellkpgetvnaaryqqqlinlnralqrkrrviflhdnapshtaravrdtletlnwevlphaayspdlapsdyhlfasmghalaeqrfdsyesvkkwldewfaakddefywrgihklperwekcvasdgkyfe >5hp1_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A DNA APTAMER AND FOSCARNET, A PYROPHOSPHATE ANALOG organism=? DNA sequence DA(F0):ATM(F101) DC(F1):DG(F33) OMC(F2):DG(F32) DC(F3):DG(F31) OMC(F4):DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) chainA ( 61) PHE61 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG72 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) GLU89 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 12 3 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaiKkkdstkwrklvdFrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglttpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvRqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5hp1_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A DNA APTAMER AND FOSCARNET, A PYROPHOSPHATE ANALOG organism=? DNA sequence DA(E0):ATM(E101) DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainC ( 61) PHE61 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG72 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) GLU89 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpQgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkKdstkwrklvdfrElnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgSpaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwgpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskLlrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwy >5hp4_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE BACTERIOHAGE T5 D15 FLAP ENDONUCLEASE (D155K) PSEUDO-ENZYME-PRODUCT COMPLEX WITH DNA AND METAL IONS organism=ESCHERICHIA PHAGE T5 DNA sequence DG(X1) DA(X2) DT(X3) DC(X4) DT(X5) DA(X6) DT(X7) DA(X8) DT(X9) DG(X10) DC(X11) DC(X12) DA(X13) DT(X14) DC(X15) DG(X16) DG(X17) chainA ( 13) PHE32 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 ( 14) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 16) LYS35 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 ( 17) HIS36 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0 0 ( 18) ASN37 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 19) ASN38 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 20) SER39 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 35) LEU54 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 70) LYS89 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 75) THR94 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 77) GLU96 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 78) GLU97 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 ( 81) LEU100 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (148) PHE167 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 (150) PHE169 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (153) ARG172 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (183) LEU202 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 prot.sequence rnlmivdgtnlgFRfKHNNSkkpfassyvstiqsLaksYsarttivlgdkgksvfrlehlpeykgnrdeKyaqrTeEEkaLdeqffeylkdafelckttfptftirgveaddmaayivklighlydhvwlistdgkwdtlltdkvsrFsFTtRreyhlrdmyehhnvddveqfislkaimgdLgdnirgvegigakrgyniirefgnvldiidqlplpgkqkyiqnlnaseellfrnlilvdlptycvdaiaavgqdvldkftkdileiaeq >5hr4_C:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF TYPE IIL RESTRICTION-MODIFICATION ENZYME MMEI IN COMPLEX WITH DNA HAS IMPLICATIONS FOR ENGINEERING OF NEW SPECIFICITIES organism=METHYLOPHILUS METHYLOTROPHUS DNA sequence DG(I17):DC(H13) DT(I18):DA(H12) DT(I19):DA(H11) DA(I20):DT(H10) DT(I21):DA(H9) DG(I22):DC(H8) DT(I23):DA(H7) DC(I24):DG(H6) DG(I25):DC(H5) DG(I26):DC(H4) DA(I27):DT(H3) DT(I28):DA(H2) DA(I29):DT(H1) chainC (158) HIS314 0 0 0 0 0 0 19 0 0 0 0 0 0 (325) ASN481 0 0 0 0 0 0 10 0 0 0 0 0 0 (328) PHE484 0 0 0 0 0 0 41 0 0 0 0 0 0 (331) LYS487 0 0 0 0 0 0 0 0 0 3 0 0 0 (332) SER488 0 0 0 0 0 0 0 0 0 6 0 0 0 (333) LYS489 0 0 0 0 0 0 0 6 1 0 0 0 0 (414) TRP570 0 0 0 0 0 0 17 0 0 0 0 0 0 (422) ALA578 0 0 0 0 0 0 1 0 0 0 0 0 0 (423) ALA579 0 0 0 0 0 2 0 0 0 0 0 0 0 (424) VAL580 0 0 0 0 0 0 4 0 0 0 0 0 0 (486) TYR642 0 0 0 0 0 0 0 0 1 7 7 0 0 (489) LYS645 0 0 0 0 0 0 0 0 14 7 11 0 0 (567) ALA723 0 0 0 0 0 0 0 0 0 0 2 0 0 (569) PRO725 0 0 0 0 0 0 0 0 0 0 0 7 2 (581) PHE737 0 0 0 0 0 0 0 0 0 0 6 1 0 (582) TYR738 0 0 0 0 0 0 0 0 0 0 5 2 0 (595) GLU751 0 0 0 0 0 0 0 2 5 2 0 0 0 (596) THR752 0 0 0 0 0 1 3 0 0 0 0 0 0 (617) ASN773 0 0 0 0 0 0 0 1 7 0 0 0 0 (649) LEU805 0 0 0 0 0 13 2 6 0 0 0 0 0 (650) GLU806 0 0 0 0 1 13 0 0 0 0 0 0 0 (652) ARG808 0 0 0 0 19 16 0 0 0 0 0 0 0 (654) ARG810 0 0 0 0 0 0 0 5 8 0 0 0 0 prot.sequence pqdpinikaaermgklhdtlklvgyeghalelylvrllfclfaedttifekslfqeyietktledgsdlahhintlfyvlntpeqkrlknldehlaafpyingklfeeplppaqfdkamrealldlcsldwsrispaifgslfqsimdakkrrnlgaHytseanilklikplfldelwvefekvknnknkllafhkklrgltffdpacgcgnflvityrelrlleievlrglhrggqqvldiehliqinvdqffgieieefpaqiaqvalwltdhqmnmkisdefgnyfariplkstphilnanalqidwndvleakkccfilgNppFvgKSKqtpgqkadllsvfgnlksasdldlvaawypkaahyiqtnanircafvstnsitqgeqvsllwplllslgikinfahrtfsWtneasgvAAVhcviigfglkdsdekiiyeyesingeplaikakninpylrdgvdviackrqqpisklpsmrYgnKptddgnflftdeeknqfitnepssekyfrrfvggdefinntsrwclwldgadiseiramplvlarikkvqefrlkssAkPTrqsastpmkfFYisqpdtdyllipETssenrqfipigfvdrnvissNatyhipsaeplifgllsstmhncwmrnvggrLEsRyRysaslvyntfpwiqpnekqskaieeaafailkarsnypneslaglydpktmpsellkahqkldkavdsvygfkgpnteiariaflfetyqkmtsl >5hr9_B:Nucleotidyltransferase; title=THE CRYSTAL STRUCTURE OF SE-ASFVPOLX(L52/163M MUTANT) IN COMPLEX WITH 1NT-GAP DNA1 organism=? DNA sequence DG(F9):DC(G7) DG(F10):DC(G6) DA(F11):DT(G5) DC(F12):DG(G4) DA(F13):DT(G3) DA(F14):DT(G2) DC(F15):DG(G1) chainB (116) HIS115 0 0 0 0 0 0 6 (121) VAL120 0 0 0 0 0 0 13 (124) LEU123 0 0 0 0 0 0 2 (125) ILE124 0 0 0 0 0 0 11 (128) ARG127 0 0 0 0 0 2 7 prot.sequence gmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvdmliivpekkllkhvlpnirikglsfsvkvcgerKcvlfiewekktyqldlftalaeekpyaifHftgpVsyLIriRaalkkknyklnQyglfknqtlvplkittekelikemgftyripkkrl >5hrb_A:Nucleotidyltransferase; title=THE CRYSTAL STRUCTURE OF ASFVPOLX:DNA1 BINARY COMPLEX organism=AFRICAN SWINE FEVER VIRUS DNA sequence DG(E2):DC(D9) DG(E3):DC(D8) DA(E4):DT(D7) DT(E5):DA(D6) DA(E6):DT(D5) DT(E7):DA(D4) DC(E8):DG(D3) chainA ( 87) LYS85 0 1 3 3 0 0 0 (117) HIS115 8 4 0 0 0 0 0 (122) VAL120 14 0 0 0 0 0 0 (125) LEU123 4 0 0 0 0 0 0 (126) ILE124 13 0 0 0 0 0 0 (129) ARG127 5 2 0 0 0 0 0 prot.sequence ggmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgerKcvlfiewekktyqldlftalaeekpyaifHftgpVsyLIriRaalkkknyklnQyglfknqtlvplkittekelikelgftyripkkrl >5hrd_B:Nucleotidyltransferase; title=THE CRYSTAL STRUCTURE OF ASFVPOLX:DNA2 BINARY COMPLEX organism=African swine fever virus DNA sequence DG(F1):DG(E8) DC(F2):DG(E7) DG(F3):DC(E6) DA(F4):DT(E5) DT(F5):DA(E4) DC(F6):DG(E3) DG(F7):DC(E2) DG(F8):DG(E1) chainB (117) HIS115 0 0 0 0 0 0 2 11 (122) VAL120 0 0 0 0 0 0 0 17 (125) LEU123 0 0 0 0 0 0 0 4 (126) ILE124 0 0 0 0 0 0 0 16 (129) ARG127 0 0 0 0 0 0 3 5 prot.sequence ggmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgerkcvlfiewekktyqldlftalaeekpyaifHftgpVsyLIriRaalkkknyklnQyglfknqtlvplkittekelikelgftyripkkrl >5hrd_CD:Nucleotidyltransferase; title=THE CRYSTAL STRUCTURE OF ASFVPOLX:DNA2 BINARY COMPLEX organism=African swine fever virus DNA sequence DG(G1):DG(H8) DC(G2):DG(H7) DG(G3):DC(H6) DA(G4):DT(H5) DT(G5):DA(H4) DC(G6):DG(H3) DG(G7):DC(H2) DG(G8):DG(H1) chainC (118) HIS115 0 0 0 0 0 0 3 11 (123) VAL120 0 0 0 0 0 0 0 15 (126) LEU123 0 0 0 0 0 0 0 4 (127) ILE124 0 0 0 0 0 0 0 13 (130) ARG127 0 0 0 0 0 0 3 5 chainD (118) HIS115 11 2 0 0 0 0 0 0 (123) VAL120 15 0 0 0 0 0 0 0 (126) LEU123 4 0 0 0 0 0 0 0 (127) ILE124 13 0 0 0 0 0 0 0 (130) ARG127 5 3 0 0 0 0 0 0 prot.sequence gggmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgerKcvlfiewekktyqldlftalaeekpyaifHftgpVsyLIriRaalkkknyklnQyglfknqtlvplkittekelikelgftyripkkrl/gggmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgerKcvlfiewekktyqldlftalaeekpyaifHftgpVsyLIriRaalkkknyklnQyglfknqtlvplkittekelikelgftyripkkrl >5hrf_AB:Nucleotidyltransferase; title=THE CRYSTAL STRUCTURE OF ASFVPOLX: DNA5: DGTP TERNARY COMPLEX organism=African swine fever virus DNA sequence DA(C2):DT(D9) DG(C3):DC(D8) DG(C4):DC(D7) DA(C5):DT(D6) DT(C6):DA(D5) DC(C7):DG(D4) DC(C8):DG(D3) DT(C9):DA(D2) chainA ( 89) LYS85 0 0 1 0 0 0 0 0 (119) HIS115 2 0 0 0 0 0 0 0 (131) ARG127 3 0 0 0 0 0 0 0 chainB ( 85) LYS85 0 0 0 0 0 1 0 0 (127) ARG127 0 0 0 0 0 0 0 3 prot.sequence sgggmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgerKcvlfiewekktyqldlftalaeekpyaifHftgpvsyliriRaalkkknyklnQyglfknqtlvplkittekelikelgftyripkkrl/gmltliqgkkivnhlrsrlafeygqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgerKcvlfiewekktyqldlftalaeekpyaifHftgpvsyliriRaalkkknyklnQyglfknqtlvplkittekelikelgftyripkkrl >5hrf_B:Nucleotidyltransferase; title=THE CRYSTAL STRUCTURE OF ASFVPOLX: DNA5: DGTP TERNARY COMPLEX organism=African swine fever virus DNA sequence DA(C2):DT(D9) DG(C3):DC(D8) DG(C4):DC(D7) DA(C5):DT(D6) DT(C6):DA(D5) DC(C7):DG(D4) DC(C8):DG(D3) DT(C9):DA(D2) chainB ( 85) LYS85 0 0 0 0 0 1 0 0 (127) ARG127 0 0 0 0 0 0 0 3 prot.sequence gmltliqgkkivnhlrsrlafeygqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgerKcvlfiewekktyqldlftalaeekpyaifHftgpvsyliriRaalkkknyklnQyglfknqtlvplkittekelikelgftyripkkrl >5hrg_AB:Nucleotidyltransferase; title=THE CRYSTAL STRUCTURE OF ASFVPOLX(D51N MUTANT):DNA4 BINARY COMPLEX organism=African swine fever virus DNA sequence DG(C1):DC(D8) DC(C2):DG(D7) DG(C3):DC(D6) DA(C4):DT(D5) DT(C5):DA(D4) DC(C6):DG(D3) DG(C7):DC(D2) DC(C8):DG(D1) chainA (118) HIS115 0 0 0 0 0 0 2 8 (123) VAL120 0 0 0 0 0 0 0 14 (126) LEU123 0 0 0 0 0 0 0 4 (127) ILE124 0 0 0 0 0 0 0 12 (130) ARG127 0 0 0 0 0 0 1 9 chainB ( 88) LYS85 0 0 1 0 0 0 0 0 (118) HIS115 6 2 0 0 0 0 0 0 (123) VAL120 15 0 0 0 0 0 0 0 (126) LEU123 4 0 0 0 0 0 0 0 (127) ILE124 12 0 0 0 0 0 0 0 (130) ARG127 7 1 0 0 0 0 0 0 prot.sequence gggmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvnlliivpekkllkhvlpnirikglsfsvkvcgerkcvlfiewekktyqldlftalaeekpyaifHftgpVsyLIriRaalkkknyklnQyglfknqtlvplkittekelikelgftyripkkrl/gggmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvnlliivpekkllkhvlpnirikglsfsvkvcgerKcvlfiewekktyqldlftalaeekpyaifHftgpVsyLIriRaalkkknyklnQyglfknqtlvplkittekelikelgftyripkkrl >5hrg_B:Nucleotidyltransferase; title=THE CRYSTAL STRUCTURE OF ASFVPOLX(D51N MUTANT):DNA4 BINARY COMPLEX organism=African swine fever virus DNA sequence DG(C1):DC(D8) DC(C2):DG(D7) DG(C3):DC(D6) DA(C4):DT(D5) DT(C5):DA(D4) DC(C6):DG(D3) DG(C7):DC(D2) DC(C8):DG(D1) chainB ( 88) LYS85 0 0 1 0 0 0 0 0 (118) HIS115 6 2 0 0 0 0 0 0 (123) VAL120 15 0 0 0 0 0 0 0 (126) LEU123 4 0 0 0 0 0 0 0 (127) ILE124 12 0 0 0 0 0 0 0 (130) ARG127 7 1 0 0 0 0 0 0 prot.sequence gggmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvnlliivpekkllkhvlpnirikglsfsvkvcgerKcvlfiewekktyqldlftalaeekpyaifHftgpVsyLIriRaalkkknyklnQyglfknqtlvplkittekelikelgftyripkkrl >5hrh_B:Nucleotidyltransferase; title=THE CRYSTAL STRUCTURE OF ASFVPOLX(H115F/R127A MUTANT): 1NT-GAP(P) DNA2:DGTP TERNARY COMPLEX organism=African swine fever virus DNA sequence DC(F1):DG(H8) DG(F2):DC(H7) DT(F3):DA(H6) DT(F4):DA(H5) DC(F5):DG(H4) DT(F6):DA(H3) DA(F7):DT(H2) DT(F8):DA(H1) chainB (126) ILE124 0 0 0 0 0 0 0 1 (127) ARG125 0 0 0 0 0 0 0 28 (130) ALA128 0 0 0 0 0 0 0 2 prot.sequence ggmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgerkcvlfiewekktyqldlftalaeekpyaiffftgpvsylIRiaAalkkknyklnqyglfknqtlvplkittekelikelgftyripkkrl >5hri_B:Nucleotidyltransferase; title=THE CRYSTAL STRUCTURE OF ASFVPOLX:DNA1 BINARY COMPLEX organism=African swine fever virus DNA sequence DC(F1):DG(H8) DG(F2):DC(H7) DT(F3):DA(H6) DT(F4):DA(H5) DC(F5):DG(H4) DT(F6):DA(H3) DA(F7):DT(H2) DT(F8):DA(H1) chainB (126) ILE124 0 0 0 0 0 0 0 2 (127) ARG125 0 0 0 0 0 0 0 25 (130) ALA128 0 0 0 0 0 0 0 2 prot.sequence ggmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgerkcvlfiewekktyqldlftalaeekpyaifhftgpvsylIRirAalkkknyklnqyglfknqtlvplkittekelikelgftyripkkrl >5hrk_B:Nucleotidyltransferase; title=THE CRYSTAL STRUCTURE OF ASFVPOLX(H115F MUTANT): 1NT-GAP(P) DNA2:DGTP TERNARY COMPLEX organism=African swine fever virus DNA sequence DA(D1):DT(E8) DT(D2):DA(E7) DA(D3):DT(E6) DG(D4):DC(E5) DA(D5):DT(E4) DA(D6):DT(E3) DC(D7):DG(E2) DG(D8):DC(E1) chainB (127) ARG125 37 0 0 0 0 0 0 0 (130) ALA128 2 0 0 0 0 0 0 0 prot.sequence ggmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgerkcvlfiewekktyqldlftalaeekpyaiffftgpvsyliRirAalkkknyklnqyglfknqtlvplkittekelikelgftyripkkrl >5hrl_B:Nucleotidyltransferase; title=THE CRYSTAL STRUCTURE OF ASFVPOLX: 1NT-GAP(P) DNA2: DGTP TERNARY COMPLEX. organism=African swine fever virus DNA sequence DC(F1):DG(H8) DG(F2):DC(H7) DT(F3):DA(H6) DT(F4):DA(H5) DC(F5):DG(H4) DT(F6):DA(H3) DA(F7):DT(H2) DT(F8):DA(H1) chainB (126) ILE124 0 0 0 0 0 0 0 2 (127) ARG125 0 0 0 0 0 0 0 21 (130) ALA128 0 0 0 0 0 0 0 2 prot.sequence ggmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgerkcvlfiewekktyqldlftalaeekpyaifhftgpvsylIRirAalkkknyklnqyglfknqtlvplkittekelikelgftyripkkrl >5hro_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A DNA APTAMER AND AN ALPHA-CARBOXY NUCLEOSIDE PHOSPHONATE INHIBITOR (ALPHA- CNP) organism=? DNA sequence DC(E5):DG(E37) OMC(E6):DG(E36) DC(E7):DG(E35) OMC(E8):DG(E34) DC(E9):DG(E33) DC(E10):DG(E32) DC(E11):DG(E31) DT(E12):DA(E30) DT(E13):DA(E29) DC(E14):DG(E28) DG(E15):DC(E27) DG(E16):DC(E26) DT(E17):DA(E25) DG(E18):DC(E24) DC(E19):DG(E23) chainA ( 86) GLU89 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) GLN91 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ILE94 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 (112) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) PRO157 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) GLN161 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) TYR183 0 13 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) MET184 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >5hro_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A DNA APTAMER AND AN ALPHA-CARBOXY NUCLEOSIDE PHOSPHONATE INHIBITOR (ALPHA- CNP) organism=? DNA sequence DC(E5):DG(E37) OMC(E6):DG(E36) DC(E7):DG(E35) OMC(E8):DG(E34) DC(E9):DG(E33) DC(E10):DG(E32) DC(E11):DG(E31) DT(E12):DA(E30) DT(E13):DA(E29) DC(E14):DG(E28) DG(E15):DC(E27) DG(E16):DC(E26) DT(E17):DA(E25) DG(E18):DC(E24) DC(E19):DG(E23) chainA ( 86) GLU89 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) GLN91 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ILE94 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 (112) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) PRO157 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) GLN161 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) TYR183 0 13 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) MET184 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrQlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5hro_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A DNA APTAMER AND AN ALPHA-CARBOXY NUCLEOSIDE PHOSPHONATE INHIBITOR (ALPHA- CNP) organism=? DNA sequence DC(F5):DG(F37) OMC(F6):DG(F36) DC(F7):DG(F35) OMC(F8):DG(F34) DC(F9):DG(F33) DC(F10):DG(F32) DC(F11):DG(F31) DT(F12):DA(F30) DT(F13):DA(F29) DC(F14):DG(F28) DG(F15):DC(F27) DG(F16):DC(F26) DT(F17):DA(F25) DG(F18):DC(F24) DC(F19):DG(F23) chainC ( 86) GLU89 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) GLN91 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ILE94 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 (112) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) PRO157 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) GLN161 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) TYR183 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 (181) MET184 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5hrt_A:Alkaline_phosphatase-like;His-Me_finger_endonucleases;Somatomedin_B_domain; title=CRYSTAL STRUCTURE OF MOUSE AUTOTAXIN IN COMPLEX WITH A DNA APTAMER organism=MUS MUSCULUS DNA sequence DC(B2001) DC(B2002) DT(B2003) DG(B2004):DC(B2031) DG(B2005):DC(B2030) DA(B2006):DT(B2029) DG(B2008):DA(B2010) DC(B2028) DA(B2011):DT(B2027) DC(B2012):DG(B2026) DC(B2013):DG(B2025) DT(B2024) DT(B2023) DA(B2016):DT(B2022) DA(B2017):DT(B2021) DT(B2018) chainA (186) HIS242 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (188) ARG244 0 0 0 0 0 0 0 0 0 0 0 0 4 11 1 0 (310) CYS366 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (411) LYS467 0 0 0 0 0 10 0 10 0 0 0 0 0 0 0 0 (413) PHE469 0 0 0 0 0 0 0 11 45 0 0 0 0 0 0 0 (414) PHE470 0 0 0 0 0 0 8 0 22 0 0 0 0 0 0 0 prot.sequence tntsgsckgrcfelqdcrcdnlcksysscchdfdelclktargwectkdrcgevrneenachcsedclsrgdcctnyqvvckgeshwvdddceeirvpecpagfvrppliifsvdgfrasymkkgskvmpnieklrscgthapymrpvyptktfpnlytlatglypeshgivgnsmydpvfdatfHlRgrekfnhrwwggqplwitatkqgvragtffwsvsipherriltilqwlslpdnerpsvyafyseqpdfsghkygpfgpemtnplreidktvgqlmdglkqlklhrcvnvifvgdhgmedvtCdrteflsnyltnvdditlvpgtlgrirpkipnnlkydpkaiianltckkpdqhfkpymkqhlpkrlhyannrriedlhllverrwhvarkpldvykkpsgKcFFqgdhgfdnkvnsmqtvfvgygptfkyrtkvppfenielynvmcdllglkpapnngthgslnhllrtntfrptlpeevsrpnypgimylqsdfdlgctcdsteerhllygrpavlyrtsydilyhtdfesgyseiflmplwtsytiskqaevssipehltncvrpdvrvspgfsqnclaykndkqmsygflfppylssspeakydaflvtnmvpmypafkrvwtyfqrvlvkkyaserngvnvisgpifdynynglrdiedeikqyvegssipvpthyysiitscldftqpadkcdgplsvssfilphrpdndescnssedeskwveelmkmhtarvrdiehltgldfyrktsrsyseiltlktylhtyesei >5hru_AB:LDH_C-terminal_domain-like;NADP-binding_Rossmann-fold_domains; title=CRYSTAL STRUCTURE OF PLASMODIUM VIVAX LDH IN COMPLEX WITH A DNA APTAMER CALLED PL1 organism=Plasmodium vivax DNA sequence DT(C3):DA(C34) DC(C4):DG(C33) DG(C5):DC(C32) DA(C6):DT(C31) DG(C16):DC(C30) DC(C17):DG(C29) DC(C18):DG(C28) DG(C19):DT(C27) DG(C20):DC(C26) DA(C21):DT(C13) DA(C22):DT(C12) DG(C23):DG(C25) chainA ( 79) PHE82 0 0 0 0 0 0 0 0 0 0 0 18 ( 80) THR83 0 0 0 0 0 0 0 0 0 0 4 0 ( 81) LYS84 0 0 0 0 0 0 0 0 0 1 1 4 ( 86) ASP97 0 0 0 0 0 0 0 0 0 0 0 6 ( 87) LEU98 0 0 0 0 0 0 0 0 0 0 0 3 ( 90) LEU101 0 0 0 0 0 0 0 0 0 0 0 5 chainB prot.sequence kpkivlvgsgmiggvmatlivqknlgdvvmfdvvknmpqgkaldtshsnvmaysnckvtgsnsyddlkgadvvivtagFTKaprdDLlpLnnkimieigghiknlcpnafiivvtnpvdvmvqllfehsgvpknkiiglggvldtsrlkyyisqklnvcprdvnalivgahgnkmvllkryitvggiplqefinnkkitdeevegifdrtvntaleivnllaspyvapaaaiiemaesylkdikkvlvcstllegqyghsnifggtplviggtgveqvielqlnaeektkfdeavaetkrmkali/pkpkivlvgsgmiggvmatlivqknlgdvvmfdvvknmpqgkaldtshsnvmaysnckvtgsnsyddlkgadvvivtaGFTkanrDDllPlnnkimieigghiknlcpnafiivvtnpvdvmvqllfehsgvpknkiiglggvldtsrlkyyisqklnvcprdvnalivgahgnkmvllkryitvggiplqefinnkkitdeevegifdrtvntaleivnllaspyvapaaaiiemaesylkdikkvlvcstllegqyghsnifggtplviggtgveqvielqlnaeektkfdeavaetkrmkali >5hso_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS MARR FAMILY PROTEIN RV2887 COMPLEX WITH DNA organism=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) DNA sequence DC(F31):DG(E30) DG(F32):DC(E29) DA(F33):DT(E28) DT(F34):DA(E27) DC(F35):DG(E26) DG(F36):DC(E25) DA(F37):DT(E24) DC(F38):DG(E23) DG(F39):DC(E22) DA(F40):DT(E21) DC(F41):DG(E20) DC(F42):DG(E19) DG(F43):DC(E18) DC(F44):DG(E17) DC(F45):DG(E16) DG(F46):DC(E15) DT(F47):DA(E14) DT(F48):DA(E13) DC(F49):DG(E12) DA(F50):DT(E11) DG(F51):DC(E10) DC(F52):DG(E9) DT(F53):DA(E8) DG(F54):DC(E7) DA(F55):DT(E6) DC(F56):DG(E5) DG(F57):DC(E4) DT(F58):DA(E3) DC(F59):DG(E2) DG(F60):DC(E1) chainA ( 59) GLN64 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence daplgyllyrvgavlrpevsaalsplgltlpefvclrmlsqspglssaelarhasvtpQamntvlrkledagavapatltargralakraeavvraadarvlarltapqqrefkrmleklgs >5hso_ABCD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS MARR FAMILY PROTEIN RV2887 COMPLEX WITH DNA organism=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) DNA sequence DC(E1):DG(F60) DG(E2):DC(F59) DA(E3):DT(F58) DC(E4):DG(F57) DG(E5):DC(F56) DT(E6):DA(F55) DC(E7):DG(F54) DA(E8):DT(F53) DG(E9):DC(F52) DC(E10):DG(F51) DT(E11):DA(F50) DG(E12):DC(F49) DA(E13):DT(F48) DA(E14):DT(F47) DC(E15):DG(F46) DG(E16):DC(F45) DG(E17):DC(F44) DC(E18):DG(F43) DG(E19):DC(F42) DG(E20):DC(F41) DT(E21):DA(F40) DC(E22):DG(F39) DG(E23):DC(F38) DT(E24):DA(F37) DC(E25):DG(F36) DG(E26):DC(F35) DA(E27):DT(F34) DT(E28):DA(F33) DC(E29):DG(F32) DG(E30):DC(F31) chainA ( 59) GLN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 chainB ( 59) GLN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 chainC ( 59) GLN64 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 59) GLN64 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence daplgyllyrvgavlrpevsaalsplgltlpefvclrmlsqspglssaelarhasvtpQamntvlrkledagavapatltargralakraeavvraadarvlarltapqqrefkrmleklgs/daplgyllyrvgavlrpevsaalsplgltlpefvclrmlsqspglssaelarhasvtpQamntvlrkledagavapatltargralakraeavvraadarvlarltapqqrefkrmleklgs/daplgyllyrvgavlrpevsaalsplgltlpefvclrmlsqspglssaelarhasvtpQamntvlrkledagavarplpatltargralakraeavvraadarvlarltapqqrefkrmleklgs/daplgyllyrvgavlrpevsaalsplgltlpefvclrmlsqspglssaelarhasvtpQamntvlrkledagavapatltargralakraeavvraadarvlarltapqqrefkrmleklgs >5ht2_AB:DNase_I-like; title=MOUSE TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-MG2+ COMPLEX WITH 1-N6-ETHENO-ADENINE organism=MUS MUSCULUS DNA sequence DC(D2):DG(C9) DG(D3):DC(C8) DA(D4):DT(C7) DA(D5):DT(C6) DT(D6):DA(C5) DT(D7):DA(C4) DC(D8):DG(C3) DG(D9):DC(C2) chainA (127) ARG241 0 1 0 0 0 0 0 0 (203) ILE317 22 0 0 0 0 0 0 0 (204) PRO318 18 0 0 0 0 0 0 0 (205) ALA319 3 0 0 0 0 0 0 0 (207) TYR321 4 0 0 0 0 0 0 0 chainB (186) TRP307 0 0 0 0 0 0 0 1 (196) ILE317 0 0 0 0 0 0 0 21 (197) PRO318 0 0 0 0 0 0 0 17 (198) ALA319 0 0 0 0 0 0 0 1 (200) TYR321 0 0 0 0 0 0 0 3 prot.sequence skgledsstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestREhsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlrIPAaYkhrfdriffraeghlipqsldlvglekldcgrfpsdhwgllctlnvvl/stisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytWdtkannnlrIPAaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >5ht2_B:DNase_I-like; title=MOUSE TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-MG2+ COMPLEX WITH 1-N6-ETHENO-ADENINE organism=MUS MUSCULUS DNA sequence DC(D2):DG(C9) DG(D3):DC(C8) DA(D4):DT(C7) DA(D5):DT(C6) DT(D6):DA(C5) DT(D7):DA(C4) DC(D8):DG(C3) DG(D9):DC(C2) chainB (186) TRP307 0 0 0 0 0 0 0 1 (196) ILE317 0 0 0 0 0 0 0 21 (197) PRO318 0 0 0 0 0 0 0 17 (198) ALA319 0 0 0 0 0 0 0 1 (200) TYR321 0 0 0 0 0 0 0 3 prot.sequence stisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytWdtkannnlrIPAaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >5hto_A:LDH_C-terminal_domain-like;NADP-binding_Rossmann-fold_domains; title=CRYSTAL STRUCTURE OF PLASMODIUM VIVAX LDH IN COMPLEX WITH A DNA APTAMER CALLED PL1 (TETRAMERIC LDH IN AN ASYMMETRIC UNIT) organism=Plasmodium vivax DNA sequence DT(C2):DA(C35) DT(C3):DA(C34) DC(C4):DG(C33) DG(C5):DC(C32) DA(C6):DT(C31) DG(C16):DC(C30) DC(C17):DG(C29) DC(C18):DG(C28) DG(C19):DT(C27) DG(C20):DC(C26) DA(C21):DT(C13) DA(C22):DT(C12) DG(C23):DG(C25) chainA ( 79) PHE82 0 0 0 0 0 0 0 0 0 0 0 0 18 ( 80) THR83 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 84) LEU98 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 87) LEU101 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence kpkivlvgsgmiggvmatlivqknlgdvvmfdvvknmpqgkaldtshsnvmaysnckvtgsnsyddlkgadvvivtagFTkapLlpLnnkimieigghiknlcpnafiivvtnpvdvmvqllfehsgvpknkiiglggvldtsrlkyyisqklnvcprdvnalivgahgnkmvllkryitvggiplqefinnkkitdeevegifdrtvntaleivnllaspyvapaaaiiemaesylkdikkvlvcstllegqyghsnifggtplviggtgveqvielqlnaeektkfdeavaetkrmkali >5hto_AB:LDH_C-terminal_domain-like;NADP-binding_Rossmann-fold_domains; title=CRYSTAL STRUCTURE OF PLASMODIUM VIVAX LDH IN COMPLEX WITH A DNA APTAMER CALLED PL1 (TETRAMERIC LDH IN AN ASYMMETRIC UNIT) organism=Plasmodium vivax DNA sequence DT(C2):DA(C35) DT(C3):DA(C34) DC(C4):DG(C33) DG(C5):DC(C32) DA(C6):DT(C31) DG(C16):DC(C30) DC(C17):DG(C29) DC(C18):DG(C28) DG(C19):DT(C27) DG(C20):DC(C26) DA(C21):DT(C13) DA(C22):DT(C12) DG(C23):DG(C25) chainA ( 79) PHE82 0 0 0 0 0 0 0 0 0 0 0 0 18 ( 80) THR83 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 84) LEU98 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 87) LEU101 0 0 0 0 0 0 0 0 0 0 0 0 4 chainB prot.sequence kpkivlvgsgmiggvmatlivqknlgdvvmfdvvknmpqgkaldtshsnvmaysnckvtgsnsyddlkgadvvivtagFTkapLlpLnnkimieigghiknlcpnafiivvtnpvdvmvqllfehsgvpknkiiglggvldtsrlkyyisqklnvcprdvnalivgahgnkmvllkryitvggiplqefinnkkitdeevegifdrtvntaleivnllaspyvapaaaiiemaesylkdikkvlvcstllegqyghsnifggtplviggtgveqvielqlnaeektkfdeavaetkrmkali/kpkivlvgsgmiggvmatlivqknlgdvvmfdvvknmpqgkaldtshsnvmaysnckvtgsnsyddlkgadvvivtagFTkrdDllPlnnkimieigghiknlcpnafiivvtnpvdvmvqllfehsgvpknkiiglggvldtsrlkyyisqklnvcprdvnalivgahgnkmvllkryitvggiplqefinnkkitdeevegifdrtvntaleivnllaspyvapaaaiiemaesylkdikkvlvcstllegqyghsnifggtplviggtgveqvielqlnaeektkfdeavaetkrmkali >5hto_DE:LDH_C-terminal_domain-like;NADP-binding_Rossmann-fold_domains; title=CRYSTAL STRUCTURE OF PLASMODIUM VIVAX LDH IN COMPLEX WITH A DNA APTAMER CALLED PL1 (TETRAMERIC LDH IN AN ASYMMETRIC UNIT) organism=Plasmodium vivax DNA sequence DC(F4):DG(F33) DG(F5):DC(F32) DA(F6):DT(F31) DG(F16):DC(F30) DC(F17):DG(F29) DC(F18):DG(F28) DG(F19):DT(F27) DG(F20):DC(F26) DA(F21):DT(F13) DA(F22):DT(F12) DG(F23):DG(F25) chainD ( 79) PHE82 0 0 0 0 0 0 0 0 0 0 19 ( 80) THR83 0 0 0 0 0 0 0 0 0 4 0 ( 81) LYS84 0 0 0 0 0 0 0 0 0 0 6 ( 85) ASP97 0 0 0 0 0 0 0 0 0 0 3 ( 86) LEU98 0 0 0 0 0 0 0 0 0 0 8 ( 89) LEU101 0 0 0 0 0 0 0 0 0 0 5 chainE prot.sequence kpkivlvgsgmiggvmatlivqknlgdvvmfdvvknmpqgkaldtshsnvmaysnckvtgsnsyddlkgadvvivtagFTKapdDLlpLnnkimieigghiknlcpnafiivvtnpvdvmvqllfehsgvpknkiiglggvldtsrlkyyisqklnvcprdvnalivgahgnkmvllkryitvggiplqefinnkkitdeevegifdrtvntaleivnllaspyvapaaaiiemaesylkdikkvlvcstllegqyghsnifggtplviggtgveqvielqlnaeektkfdeavaetkrmkali/kpkivlvgsgmiggvmatlivqknlgdvvmfdvvknmpqgkaldtshsnvmaysnckvtgsnsyddlkgadvvivtagFTKaprDDllPlnnkimieigghiknlcpnafiivvtnpvdvmvqllfehsgvpknkiiglggvldtsrlkyyisqklnvcprdvnalivgahgnkmvllkryitvggiplqefinnkkitdeevegifdrtvntaleivnllaspyvapaaaiiemaesylkdikkvlvcstllegqyghsnifggtplviggtgveqvielqlnaeektkfdeavaetkrmkali >5i2d_CDFGH:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF T. THERMOPHILUS TTHB099 CLASS II TRANSCRIPTION ACTIVATION COMPLEX: TAP-RPO organism=? DNA sequence DG(I-54):DC(J54) DC(I-53):DG(J53) DC(I-52):DG(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DT(I-49):DA(J49) DG(I-48):DC(J48) DT(I-47):DA(J47) DG(I-46):DC(J46) DA(I-45):DT(J45) DG(I-44):DC(J44) DC(I-43):DG(J43) DC(I-42):DG(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DC(I-39):DG(J39) DT(I-38):DA(J38) DC(I-37):DG(J37) DA(I-36):DT(J36) DC(I-35):DG(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DC(I-31):DG(J31) DA(I-30):DT(J30) DA(I-29):DT(J29) DG(I-28):DC(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DG(I-23):DC(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DT(I-18):DA(J18) DT(I-17):DA(J17) DG(I-16):DC(J16) DC(I-15):DG(J15) DC(I-14):DG(J14) DG(I-13):DC(J13) DT(I-12):DA(J12) DA(I-11):DA(J11) DT(I-10):DT(J10) DA(I-9):DA(J9) DA(I-8):DA(J8) DT(I-7):DT(J7) DG(I-6):DG(J6) DG(I-5):DG(J5) DG(I-4):DG(J4) DA(I-3):DA(J3) DG(I-2):DG(J2) DC(I-1):DC(J1) DT(I0):DT(J0) DG(I1):DG(J-1) DT(I2):DA(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DC(I5):DG(J-5) DG(I6):DC(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) chainC (127) ARG134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 (160) LYS167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (164) TRP171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (180) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 (236) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) PRO247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) LEU260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ILE325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (319) ASP326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 (324) ARG331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 (351) ARG358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) ARG388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) PHE394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) LEU418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (414) GLU421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 (419) ASP426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (420) VAL427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 chainD (580) ALA705 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (581) PRO706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 (963) THR1088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 (964) ALA1089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainF ( 2) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) VAL81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ILE88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ASN191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) LEU194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) PHE227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLU228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ARG231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) PHE233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) SER236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) THR237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) TYR238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) TRP241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) TRP242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ARG244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) GLN245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ASN248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ARG256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) VAL262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) HIS263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) GLU266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) ILE268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) ASN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) SER272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) GLU313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) VAL315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) THR319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (252) TYR329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) LEU383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) GLU395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) ARG398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (152) ILE152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) GLU154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) SER155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) SER157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (152) ILE152 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG153 0 0 0 0 0 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) GLU154 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) SER155 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS158 0 0 0 0 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadRvivsqihRspgvyftpdparpgryiasiiplpKrgpWidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdPpkrdkavaYvygLiadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvreRmlmgsedsltpaklvnsrpleaaireffsRsqlsqFkdetnplsslrhkrrisalgpggLtrEragfDVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpVRqyLheIgqvpLltleeEvelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieaNlRLvvsiakkytgrglsfldliqegnqgliravekFEykRrFkfSTYaTWWiRQaiNraiadqaRtiripVHmvEtINklSrtaRqlqqelgreptyeeiaeamgpgwdakrveetlkiaqEpVsleTpIgdekdsfYgdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtLeevgaffgvtREriRqienkalrklkyhesrtrklrdfld/mkrfarketiylrgeeartlyrleeglvrvvellpdgrlitlrhvlpgdyfgeealegkayrytaeamteavvqglepramdhealhrvarnlarqmrrvqayeahlqtgelrariaryllfladtplsardrqgiyvtvsheeiadatasIRESvSKvladlrregliatayrrvylldlaalereagsaleaa/mkrfarketiylrgeeartlyrleeglvrvvellpdgrlitlrhvlpgdyfgeealegkayrytaeamteavvqglepramdhealhrvarnlarqmrrvqayeahlqtgelrariaryllfladtplsardrqgiyvtvsheeiadatasIRESvsKvladlrregliatayrrvylldlaalereagsaleaa >5i2d_NOQRS:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF T. THERMOPHILUS TTHB099 CLASS II TRANSCRIPTION ACTIVATION COMPLEX: TAP-RPO organism=? DNA sequence DG(U-11):DC(T11) DC(U-10):DG(T10) DA(U-9):DT(T9) DT(U-8):DA(T8) DC(U-7):DG(T7) DC(U-6):DG(T6) DG(U-5):DC(T5) DT(U-4):DA(T4) DG(U-3):DC(T3) DA(U-2):DT(T2) DG(U-1):DG(T1) DT(U0):DT(T0) DC(U1):DC(T-1) DG(U2):DG(T-2) DA(U3):DA(T-3) DG(U4):DG(T-4) DG(U5):DG(T-5) DG(U6):DG(T-6) DT(U7):DT(T-7) DA(U8):DA(T-8) DA(U9):DA(T-9) DT(U10):DT(T-10) DA(U11):DA(T-11) DA(U12):DT(T-12) DC(U13):DG(T-13) DG(U14):DC(T-14) DG(U15):DC(T-15) DC(U16):DG(T-16) DA(U17):DT(T-17) DA(U18):DT(T-18) DC(U19):DG(T-19) DG(U20):DC(T-20) DG(U21):DC(T-21) DA(U22):DT(T-22) DC(U23):DG(T-23) DG(U24):DC(T-24) DG(U25):DC(T-25) DG(U26):DC(T-26) DC(U27):DG(T-27) DC(U28):DG(T-28) DT(U29):DA(T-29) DT(U30):DA(T-30) DG(U31):DC(T-31) DA(U32):DT(T-32) DC(U33):DG(T-33) DT(U34):DA(T-34) DG(U35):DC(T-35) DT(U36):DA(T-36) DG(U37):DC(T-37) DA(U38):DT(T-38) DG(U39):DC(T-39) DG(U40):DC(T-40) DT(U41):DA(T-41) DG(U42):DC(T-42) DG(U43):DC(T-43) DC(U44):DG(T-44) DT(U45):DA(T-45) DC(U46):DG(T-46) DA(U47):DT(T-47) DC(U48):DG(T-48) DA(U49):DT(T-49) DA(U50):DT(T-50) DG(U51):DC(T-51) DG(U52):DC(T-52) DG(U53):DC(T-53) DC(U54):DG(T-54) chainN (127) ARG134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) ARG142 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO166 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) LYS167 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) TRP171 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) PRO247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) LEU260 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ILE325 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ASP326 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) ARG331 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (351) ARG358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) ARG388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) PHE394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) LEU418 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) GLU421 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) ARG422 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (419) ASP426 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) VAL427 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) ALA447 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO (580) ALA705 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (581) PRO706 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (963) THR1088 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (964) ALA1089 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 2) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) VAL81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) HIS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ASN191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) LEU194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) PHE227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLU228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ARG231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) PHE233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) LYS234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) SER236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) THR237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) TYR238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) TRP241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ARG244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) GLN245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ASN248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ARG256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) VAL262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) HIS263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) GLU266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) ILE268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) ASN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) SER272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) ARG273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) GLU313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) VAL315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) THR319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (252) TYR329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) GLU395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) ARG398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR (152) ILE152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) GLU154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) SER155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) SER157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainS (152) ILE152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 (153) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 0 0 0 (154) GLU154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 4 0 0 0 0 0 0 0 (158) LYS158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadRvivsqihRspgvyftpdparpgryiasiiplPKrgpWidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdPpkrdkavaYvygLiadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvreRmlmgsedsltpaklvnsrpleaaireffsRsqlsqFkdetnplsslrhkrrisalgpggLtrERagfDVrdvhrthygricpvetpegAniglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpVRqyLHeigqvpLltleeEvelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieaNlRLvvsiakkytgrglsfldliqegnqgliravekFEykRrFKfSTYaTWwiRQaiNraiadqaRtiripVHmvEtINklSRtaRqlqqelgreptyeeiaeamgpgwdakrveetlkiaqEpVsleTpIgdekdsfYgdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtREriRqienkalrklkyhesrtrklrdfld/mkrfarketiylrgeeartlyrleeglvrvvellpdgrlitlrhvlpgdyfgeealegkayrytaeamteavvqglepramdhealhrvarnlarqmrrvqayeahlqtgelrariaryllfladtplsardrqgiyvtvsheeiadatasIRESvSKvladlrregliatayrrvylldlaalereagsaleaa/mkrfarketiylrgeeartlyrleeglvrvvellpdgrlitlrhvlpgdyfgeealegkayrytaeamteavvqglepramdhealhrvarnlarqmrrvqayeahlqtgelrariaryllfladtplsardrqgiyvtvsheeiadatasIREsvsKvladlrregliatayrrvylldlaalereagsaleaa >5i2d_R:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF T. THERMOPHILUS TTHB099 CLASS II TRANSCRIPTION ACTIVATION COMPLEX: TAP-RPO organism=? DNA sequence DG(U-11):DC(T11) DC(U-10):DG(T10) DA(U-9):DT(T9) DT(U-8):DA(T8) DC(U-7):DG(T7) DC(U-6):DG(T6) DG(U-5):DC(T5) DT(U-4):DA(T4) DG(U-3):DC(T3) DA(U-2):DT(T2) DG(U-1):DG(T1) DT(U0):DT(T0) DC(U1):DC(T-1) DG(U2):DG(T-2) DA(U3):DA(T-3) DG(U4):DG(T-4) DG(U5):DG(T-5) DG(U6):DG(T-6) DT(U7):DT(T-7) DA(U8):DA(T-8) DA(U9):DA(T-9) DT(U10):DT(T-10) DA(U11):DA(T-11) DA(U12):DT(T-12) DC(U13):DG(T-13) DG(U14):DC(T-14) DG(U15):DC(T-15) DC(U16):DG(T-16) DA(U17):DT(T-17) DA(U18):DT(T-18) DC(U19):DG(T-19) DG(U20):DC(T-20) DG(U21):DC(T-21) DA(U22):DT(T-22) DC(U23):DG(T-23) DG(U24):DC(T-24) DG(U25):DC(T-25) DG(U26):DC(T-26) DC(U27):DG(T-27) DC(U28):DG(T-28) DT(U29):DA(T-29) DT(U30):DA(T-30) DG(U31):DC(T-31) DA(U32):DT(T-32) DC(U33):DG(T-33) DT(U34):DA(T-34) DG(U35):DC(T-35) DT(U36):DA(T-36) DG(U37):DC(T-37) DA(U38):DT(T-38) DG(U39):DC(T-39) DG(U40):DC(T-40) DT(U41):DA(T-41) DG(U42):DC(T-42) DG(U43):DC(T-43) DC(U44):DG(T-44) DT(U45):DA(T-45) DC(U46):DG(T-46) DA(U47):DT(T-47) DC(U48):DG(T-48) DA(U49):DT(T-49) DA(U50):DT(T-50) DG(U51):DC(T-51) DG(U52):DC(T-52) DG(U53):DC(T-53) DC(U54):DG(T-54) chainR (152) ILE152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) GLU154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) SER155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) SER157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkrfarketiylrgeeartlyrleeglvrvvellpdgrlitlrhvlpgdyfgeealegkayrytaeamteavvqglepramdhealhrvarnlarqmrrvqayeahlqtgelrariaryllfladtplsardrqgiyvtvsheeiadatasIRESvSKvladlrregliatayrrvylldlaalereagsaleaa >5i3u_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE N-SITE COMPLEX; CATALYTIC INCORPORATION OF AZTMP TO A DNA APTAMER IN CRYSTAL organism=? DNA sequence DA(E0):ATM(E34) DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 58) PHE61 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ILE63 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG72 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LEU74 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) GLU89 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) GLN91 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ILE94 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 (112) TYR115 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN151 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) PRO157 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) GLN161 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) TYR183 0 0 14 3 0 0 0 0 0 0 0 0 0 0 0 0 (181) MET184 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) ASN265 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (472) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainB prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgIkvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5i3u_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE N-SITE COMPLEX; CATALYTIC INCORPORATION OF AZTMP TO A DNA APTAMER IN CRYSTAL organism=? DNA sequence DA(F0):ATM(F34) DC(F1):DG(F33) OMC(F2):DG(F32) DC(F3):DG(F31) OMC(F4):DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) chainC ( 61) PHE61 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG72 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) GLU89 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkKdstkwrklvdfrElnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwgpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskLlrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwy >5i42_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A DNA APTAMER, AZTTP, AND CA(2+) ION organism=? DNA sequence DA(E1):AZT(A602) DC(E2):DG(E34) OMC(E3):DG(E33) DC(E4):DG(E32) OMC(E5):DG(E31) DC(E6):DG(E30) DC(E7):DG(E29) DC(E8):DG(E28) DT(E9):DA(E27) DT(E10):DA(E26) DC(E11):DG(E25) DG(E12):DC(E24) DG(E13):DC(E23) DT(E14):DA(E22) DG(E15):DC(E21) DC(E16):DG(E20) chainA ( 61) PHE61 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ILE63 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LYS70 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG72 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) GLU89 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 (110) ASP110 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ASP113 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ALA114 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ASP185 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) LYS220 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >5i42_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A DNA APTAMER, AZTTP, AND CA(2+) ION organism=? DNA sequence DA(E1):AZT(A602) DC(E2):DG(E34) OMC(E3):DG(E33) DC(E4):DG(E32) OMC(E5):DG(E31) DC(E6):DG(E30) DC(E7):DG(E29) DC(E8):DG(E28) DT(E9):DA(E27) DT(E10):DA(E26) DC(E11):DG(E25) DG(E12):DC(E24) DG(E13):DC(E23) DT(E14):DA(E22) DG(E15):DC(E21) DC(E16):DG(E20) chainA ( 61) PHE61 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ILE63 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LYS70 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG72 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) GLU89 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 (110) ASP110 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ASP113 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ALA114 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ASP185 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) LYS220 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaiKkKdstkwrklvdFrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsKllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5i42_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A DNA APTAMER, AZTTP, AND CA(2+) ION organism=? DNA sequence DA(F1):AZT(C602) DC(F2):DG(F34) OMC(F3):DG(F33) DC(F4):DG(F32) OMC(F5):DG(F31) DC(F6):DG(F30) DC(F7):DG(F29) DC(F8):DG(F28) DT(F9):DA(F27) DT(F10):DA(F26) DC(F11):DG(F25) DG(F12):DC(F24) DG(F13):DC(F23) DT(F14):DA(F22) DG(F15):DC(F21) DC(F16):DG(F20) chainC ( 61) PHE61 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LYS70 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG72 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) GLU89 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 (110) ASP110 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ASP113 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ALA114 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ASP185 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) LYS220 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaiKkkdstkwrklvdFrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsKllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5i44_AB:Putative_DNA-binding_domain; title=STRUCTURE OF RACA-DNA COMPLEX; P21 FORM organism=Bacillus subtilis DNA sequence DT(W1):DA(U14) DG(W2):DC(U13) DA(W3):DT(U12) DC(W4):DG(U11) DG(W5):DC(U10) DC(W6):DG(U9) DC(W7):DG(U8) DG(W8):DC(U7) DG(W9):DC(U6) DC(W10):DG(U5) DG(W11):DC(U4) DT(W12):DA(U3) DC(W13):DG(U2) DA(W14):DT(U1) chainB ( 18) LYS19 0 0 0 1 9 7 0 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 0 0 0 3 0 0 0 0 0 0 chainA ( 18) LYS19 0 0 5 9 5 0 0 0 0 0 0 0 0 0 ( 21) GLN22 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 22) ARG23 21 11 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gshmntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihl/gshmntnmvaselgvsaKtvqRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp >5i44_DEFGHI:Putative_DNA-binding_domain; title=STRUCTURE OF RACA-DNA COMPLEX; P21 FORM organism=Bacillus subtilis DNA sequence DT(W1):DA(U14) DG(W2):DC(U13) DA(W3):DT(U12) DC(W4):DG(U11) DG(W5):DC(U10) DC(W6):DG(U9) DC(W7):DG(U8) DG(W8):DC(U7) DG(W9):DC(U6) DC(W10):DG(U5) DG(W11):DC(U4) DT(W12):DA(U3) DC(W13):DG(U2) DA(W14):DT(U1) DT(P1):DA(R14) DG(P2):DC(R13) DA(P3):DT(R12) DC(P4):DG(R11) DG(P5):DC(R10) DC(P6):DG(R9) DC(P7):DG(R8) DG(P8):DC(R7) DG(P9):DC(R6) DC(P10):DG(R5) DG(P11):DC(R4) DT(P12):DA(R3) DC(P13):DG(R2) DA(P14):DT(R1) DT(Z1):DA(T14) DG(Z2):DC(T13) DA(Z3):DT(T12) DC(Z4):DG(T11) DG(Z5):DC(T10) DC(Z6):DG(T9) DC(Z7):DG(T8) DG(Z8):DC(T7) DG(Z9):DC(T6) DC(Z10):DG(T5) DG(Z11):DC(T4) DT(Z12):DA(T3) DC(Z13):DG(T2) DA(Z14):DT(T1) chainD ( 18) LYS19 0 0 0 0 0 0 0 0 0 7 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLN22 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 0 0 0 0 0 0 0 3 10 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 18) LYS19 0 0 0 0 0 0 0 3 7 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 17) LYS17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) GLN20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 18) LYS19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLN22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 6 0 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 9 4 0 0 0 0 0 0 0 0 0 0 0 ( 35) HIS35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainI ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gshmntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihl/gshmntnmvaselgvsaKtvqRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp/gshmntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp/shmntnmvaselgvsaKtvQrwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlpk/mntnmvaselgvsaKtvQRwvkqlnlpaernelgHysftaedvkvlksvkkqisegtaiqdihl/mntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp >5i44_I:Putative_DNA-binding_domain; title=STRUCTURE OF RACA-DNA COMPLEX; P21 FORM organism=Bacillus subtilis DNA sequence DT(W1):DA(U14) DG(W2):DC(U13) DA(W3):DT(U12) DC(W4):DG(U11) DG(W5):DC(U10) DC(W6):DG(U9) DC(W7):DG(U8) DG(W8):DC(U7) DG(W9):DC(U6) DC(W10):DG(U5) DG(W11):DC(U4) DT(W12):DA(U3) DC(W13):DG(U2) DA(W14):DT(U1) DT(P1):DA(R14) DG(P2):DC(R13) DA(P3):DT(R12) DC(P4):DG(R11) DG(P5):DC(R10) DC(P6):DG(R9) DC(P7):DG(R8) DG(P8):DC(R7) DG(P9):DC(R6) DC(P10):DG(R5) DG(P11):DC(R4) DT(P12):DA(R3) DC(P13):DG(R2) DA(P14):DT(R1) DT(Z1):DA(T14) DG(Z2):DC(T13) DA(Z3):DT(T12) DC(Z4):DG(T11) DG(Z5):DC(T10) DC(Z6):DG(T9) DC(Z7):DG(T8) DG(Z8):DC(T7) DG(Z9):DC(T6) DC(Z10):DG(T5) DG(Z11):DC(T4) DT(Z12):DA(T3) DC(Z13):DG(T2) DA(Z14):DT(T1) chainI ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLN18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp >5i44_JK:Putative_DNA-binding_domain; title=STRUCTURE OF RACA-DNA COMPLEX; P21 FORM organism=Bacillus subtilis DNA sequence DT(T1):DA(Z14) DG(T2):DC(Z13) DA(T3):DT(Z12) DC(T4):DG(Z11) DG(T5):DC(Z10) DC(T6):DG(Z9) DC(T7):DG(Z8) DG(T8):DC(Z7) DG(T9):DC(Z6) DC(T10):DG(Z5) DG(T11):DC(Z4) DT(T12):DA(Z3) DC(T13):DG(Z2) DA(T14):DT(Z1) chainJ ( 18) LYS19 0 0 0 0 4 6 2 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainK ( 17) LYS17 0 0 3 10 7 0 0 0 0 0 0 0 0 0 ( 20) GLN20 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 21) ARG21 20 8 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gshmntnmvaselgvsaKtvqRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihl/shmntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihl >5i50_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURE OF OMOMYC BOUND TO DOUBLE-STRANDED DNA organism=Homo sapiens DNA sequence DG(D1):DC(C22) DT(D2):DA(C21) DG(D3):DC(C20) DT(D4):DA(C19) DA(D5):DT(C18) DG(D6):DC(C17) DG(D7):DC(C16) DC(D8):DG(C15) DC(D9):DG(C14) DA(D10):DT(C13) DC(D11):DG(C12) DG(D12):DC(C11) DT(D13):DA(C10) DG(D14):DC(C9) DA(D15):DT(C8) DC(D16):DG(C7) DC(D17):DG(C6) DG(D18):DC(C5) DG(D19):DC(C4) DG(D20):DC(C3) DT(D21):DA(C2) DG(D22):DC(C1) chainA ( 12) HIS12 0 0 0 0 0 0 0 0 0 0 0 0 8 9 3 0 0 0 0 0 0 0 ( 13) ASN13 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 15) LEU15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 16) GLU16 0 0 0 0 0 0 0 0 0 0 0 0 9 10 4 0 0 0 0 0 0 0 ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 ( 20) ARG20 0 0 0 0 0 0 0 0 0 0 13 8 0 0 0 0 0 0 0 0 0 0 chainB ( 16) HIS12 0 0 0 0 0 0 0 7 13 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ASN13 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) GLU16 0 0 0 0 0 0 0 4 10 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG19 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG20 0 0 0 0 0 0 0 0 0 0 5 12 0 0 0 0 0 0 0 0 0 0 prot.sequence mateenvkrrtHNvLErqRRnelkrsffalrdqipelennekapkvvilkkatayilsvqaetqkliseidllrkqneqlkhkleqlrnsca/fqgamateenvkrrtHNvLErqRRnelkrsffalrdqipelennekapkvvilkkatayilsvqaetqkliseidllrkqneqlkhkleqlrnsca >5i50_B:HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURE OF OMOMYC BOUND TO DOUBLE-STRANDED DNA organism=Homo sapiens DNA sequence DG(D1):DC(C22) DT(D2):DA(C21) DG(D3):DC(C20) DT(D4):DA(C19) DA(D5):DT(C18) DG(D6):DC(C17) DG(D7):DC(C16) DC(D8):DG(C15) DC(D9):DG(C14) DA(D10):DT(C13) DC(D11):DG(C12) DG(D12):DC(C11) DT(D13):DA(C10) DG(D14):DC(C9) DA(D15):DT(C8) DC(D16):DG(C7) DC(D17):DG(C6) DG(D18):DC(C5) DG(D19):DC(C4) DG(D20):DC(C3) DT(D21):DA(C2) DG(D22):DC(C1) chainB ( 16) HIS12 0 0 0 0 0 0 0 7 13 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ASN13 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) GLU16 0 0 0 0 0 0 0 4 10 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG19 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG20 0 0 0 0 0 0 0 0 0 0 5 12 0 0 0 0 0 0 0 0 0 0 prot.sequence fqgamateenvkrrtHNvLErqRRnelkrsffalrdqipelennekapkvvilkkatayilsvqaetqkliseidllrkqneqlkhkleqlrnsca >5iff_AB:Transglycosidases; title=CRYSTAL STRUCTURE OF R.PABI-NONSPECIFIC DNA COMPLEX organism=Pyrococcus abyssi DNA sequence DG(C1) DC(C2) DA(C3) DC(C4) DT(C5) DA(C6) DG(C7) DT(C8) DT(C9) DC(C10) DG(C11) DA(C12) DA(C13) DC(C14) DT(C15) DA(C16) DG(C17) DT(C18) DG(C19) DC(C20) chainA chainB (145) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 prot.sequence easvsfengkivvrlpitrptskiavkkiengvgipvstrkksfpsdenlrdyyiawqisyardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlkhkQravgyqsmvyvcipltnvepslagrvarrnevvkyevpvdlmkellkafiiasethkndivkflrsii/easvsfengkivvrlpitrptskiavkkiengvgipvstrkksfplrdyyiawqisyardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlkhkqRavgyqsmvyvcipltnvepslagrvarrnevvkyevpvdlmkellkafiiasethkndivkflrsii >5iff_B:Transglycosidases; title=CRYSTAL STRUCTURE OF R.PABI-NONSPECIFIC DNA COMPLEX organism=Pyrococcus abyssi DNA sequence DG(C1) DC(C2) DA(C3) DC(C4) DT(C5) DA(C6) DG(C7) DT(C8) DT(C9) DC(C10) DG(C11) DA(C12) DA(C13) DC(C14) DT(C15) DA(C16) DG(C17) DT(C18) DG(C19) DC(C20) chainB (145) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 prot.sequence easvsfengkivvrlpitrptskiavkkiengvgipvstrkksfplrdyyiawqisyardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlkhkqRavgyqsmvyvcipltnvepslagrvarrnevvkyevpvdlmkellkafiiasethkndivkflrsii >5iik_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF THE POST-CATALYTIC NICK COMPLEX OF DNA POLYMERASE LAMBDA WITH A TEMPLATING 8-OXO-DG AND INCORPORATED DC organism=Homo sapiens DNA sequence DA(T5):DT(P7) 8OG(T6):DC(P6) DT(T7):DA(P5) DA(T8):DT(P4) DC(T9):DG(P3) DT(T10):DA(P2) DG(T11):DC(P1) chainA (223) LYS472 0 0 0 1 0 0 0 (256) TYR505 5 9 0 0 0 0 0 (261) ALA510 7 0 0 0 0 0 0 (264) ASN513 5 0 0 0 0 0 0 (265) ARG514 27 0 0 0 0 0 0 (268) ARG517 8 6 0 0 0 0 0 (280) GLU529 0 9 2 0 0 0 0 prot.sequence tnhnlhiteklevlakaysvqgdKwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >5iil_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF THE POST-CATALYTIC NICK COMPLEX OF DNA POLYMERASE LAMBDA WITH A TEMPLATING 8-OXO-DG AND INCORPORATED DA organism=Homo sapiens DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DA(P6):8OG(T6) DT(P7):DA(T5) chainA (256) TYR505 0 0 0 0 0 8 5 (261) ALA510 0 0 0 0 0 0 7 (264) ASN513 0 0 0 0 0 0 5 (265) ARG514 0 0 0 0 0 0 25 (268) ARG517 0 0 0 0 0 8 8 (280) GLU529 0 0 0 0 0 1 0 prot.sequence tnhnlhiteklevlakaysvqgdKwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >5iim_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF THE PRE-CATALYTIC TERNARY EXTENSION COMPLEX OF DNA POLYMERASE LAMBDA WITH AN 8-OXO-DG:DA BASE-PAIR organism=Homo sapiens DNA sequence DA(T5):DA(P6) DT(T7):DA(P5) DA(T8):DT(P4) DC(T9):DG(P3) DT(T10):DA(P2) DG(T11):DC(P1) chainA (256) TYR505 8 0 0 0 0 0 (265) ARG514 26 0 0 0 0 0 (268) ARG517 8 0 0 0 0 0 (280) GLU529 0 1 0 0 0 0 prot.sequence tnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsahfnRsmRalaktkgmslsEhalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >5iio_E:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF THE DNA POLYMERASE LAMBDA BINARY COMPLEX organism=Homo sapiens DNA sequence DG(H1):DC(F4) DC(H2):DG(F3) DC(H3):DG(F2) DG(H4):DC(F1) DC(J1):DG(L4) DG(J2):DC(L3) DG(J3):DC(L2) DC(J4):DG(L1) chainE ( 24) TRP274 40 0 0 0 0 0 0 0 ( 25) ARG275 7 0 0 0 0 0 0 0 ( 27) LEU277 3 0 0 0 0 0 0 0 prot.sequence nhnlhiteklevlakaysvqgdkWRaLgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >5iio_EI:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;DNA_polymerase_beta-like,_second_domain;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF THE DNA POLYMERASE LAMBDA BINARY COMPLEX organism=Homo sapiens DNA sequence DG(L1):DC(J4) DC(L2):DG(J3) DC(L3):DG(J2) DG(L4):DC(J1) DC(F1):DG(H4) DG(F2):DC(H3) DG(F3):DC(H2) DC(F4):DG(H1) chainE ( 24) TRP274 0 0 0 0 0 0 0 40 ( 25) ARG275 0 0 0 0 0 0 0 7 ( 27) LEU277 0 0 0 0 0 0 0 3 chainI ( 25) TRP274 43 0 0 0 0 0 0 0 ( 26) ARG275 11 0 0 0 0 0 0 0 ( 28) LEU277 6 0 0 0 0 0 0 0 prot.sequence nhnlhiteklevlakaysvqgdkWRaLgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw/tnhnlhiteklevlakaysvqgdkWRaLgyaKainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >5ink_AB:DNase_I-like; title=MOUSE TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-ABASIC/THF-MG2+ COMPLEX organism=Mus musculus DNA sequence DC(C2):DG(D9) DG(C3):DC(D8) DA(C4):DT(D7) DA(C5):DT(D6) DT(C6):DA(D5) DT(C7):DA(D4) DC(C8):DG(D3) DG(C9):DC(D2) chainA (201) ILE317 0 0 0 0 0 0 0 19 (202) PRO318 0 0 0 0 0 0 0 18 (203) ALA319 0 0 0 0 0 0 0 3 (205) TYR321 0 0 0 0 0 0 0 7 chainB (185) TRP307 1 0 0 0 0 0 0 0 (195) ILE317 22 0 0 0 0 0 0 0 (196) PRO318 8 0 0 0 0 0 0 0 (199) TYR321 1 0 0 0 0 0 0 0 prot.sequence gledsstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlrIPAaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl/tisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytWdtkannnlrIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >5ink_B:DNase_I-like; title=MOUSE TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-ABASIC/THF-MG2+ COMPLEX organism=Mus musculus DNA sequence DC(D2):DG(C9) DG(D3):DC(C8) DA(D4):DT(C7) DA(D5):DT(C6) DT(D6):DA(C5) DT(D7):DA(C4) DC(D8):DG(C3) DG(D9):DC(C2) chainB (185) TRP307 0 0 0 0 0 0 0 1 (195) ILE317 0 0 0 0 0 0 0 22 (196) PRO318 0 0 0 0 0 0 0 8 (199) TYR321 0 0 0 0 0 0 0 1 prot.sequence tisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytWdtkannnlrIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >5inl_A:DNase_I-like; title=MOUSE TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-MG2+ COMPLEX WITH DEOXYADENOSINE organism=Mus musculus DNA sequence DC(D2):DG(C9) DG(D3):DC(C8) DA(D4):DT(C7) DA(D5):DT(C6) DT(D6):DA(C5) DT(D7):DA(C4) DC(D8):DG(C3) DG(D9):DC(C2) chainA (203) ILE317 22 0 0 0 0 0 0 0 (204) PRO318 18 0 0 0 0 0 0 0 (205) ALA319 3 0 0 0 0 0 0 0 (207) TYR321 3 0 0 0 0 0 0 0 prot.sequence skgledsstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlrIPAaYkhrfdriffraeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >5inl_AB:DNase_I-like; title=MOUSE TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-MG2+ COMPLEX WITH DEOXYADENOSINE organism=Mus musculus DNA sequence DC(D2):DG(C9) DG(D3):DC(C8) DA(D4):DT(C7) DA(D5):DT(C6) DT(D6):DA(C5) DT(D7):DA(C4) DC(D8):DG(C3) DG(D9):DC(C2) chainA (203) ILE317 22 0 0 0 0 0 0 0 (204) PRO318 18 0 0 0 0 0 0 0 (205) ALA319 3 0 0 0 0 0 0 0 (207) TYR321 3 0 0 0 0 0 0 0 chainB (196) ILE317 0 0 0 0 0 0 0 20 (197) PRO318 0 0 0 0 0 0 0 17 (198) ALA319 0 0 0 0 0 0 0 1 (200) TYR321 0 0 0 0 0 0 0 3 prot.sequence skgledsstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlrIPAaYkhrfdriffraeghlipqsldlvglekldcgrfpsdhwgllctlnvvl/stisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlrIPAaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >5ino_A:DNase_I-like; title=HUMAN TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-MG2+ COMPLEX organism=Homo sapiens DNA sequence DC(D2):DG(C9) DG(D3):DC(C8) DA(D4):DT(C7) DA(D5):DT(C6) DT(D6):DA(C5) DT(D7):DA(C4) DC(D8):DG(C3) DG(D9):DC(C2) chainA (200) ILE307 28 0 0 0 0 0 0 0 (202) ALA309 1 0 0 0 0 0 0 0 prot.sequence qengsmfslitwnidgldlnnlserargvcsylalyspdviflqevippyysylkkrssnyeiitgheegyftaimlkksrvklksqeiipfpstkmmrnllcvhvnvsgnelclmtshlestrghaaermnqlkmvlkkmqeapesatvifagdtnlrdrevtrcgglpnnivdvweflgkpkhcqytwdtqmnsnlgItAacklrfdriffraaaeghiiprsldllglekldcgrfpsdhwgllcnldii >5ino_AB:DNase_I-like; title=HUMAN TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-MG2+ COMPLEX organism=Homo sapiens DNA sequence DC(C2):DG(D9) DG(C3):DC(D8) DA(C4):DT(D7) DA(C5):DT(D6) DT(C6):DA(D5) DT(C7):DA(D4) DC(C8):DG(D3) DG(C9):DC(D2) chainA (200) ILE307 0 0 0 0 0 0 0 28 (202) ALA309 0 0 0 0 0 0 0 1 chainB (197) ILE307 6 0 0 0 0 0 0 0 (199) ALA309 1 0 0 0 0 0 0 0 prot.sequence qengsmfslitwnidgldlnnlserargvcsylalyspdviflqevippyysylkkrssnyeiitgheegyftaimlkksrvklksqeiipfpstkmmrnllcvhvnvsgnelclmtshlestrghaaermnqlkmvlkkmqeapesatvifagdtnlrdrevtrcgglpnnivdvweflgkpkhcqytwdtqmnsnlgItAacklrfdriffraaaeghiiprsldllglekldcgrfpsdhwgllcnldii/gsmfslitwnidgldlnnlserargvcsylalyspdviflqevippyysylkkrssnyeiitgheegyftaimlkksrvklksqeiipfpstkmmrnllcvhvnvsgnelclmtshlestrghaaermnqlkmvlkkmqeapesatvifagdtnlrdrevtrcgglpnnivdvweflgkpkhcqytwdtqmnsnlgItAacklrfdriffraaeghiiprsldllglekldcgrfpsdhwgllcnldi >5inp_AB:DNase_I-like; title=MOUSE TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-MN2+ COMPLEX organism=Mus musculus DNA sequence DC(C2):DG(D9) DG(C3):DC(D8) DA(C4):DT(D7) DA(C5):DT(D6) DT(C6):DA(D5) DT(C7):DA(D4) DC(C8):DG(D3) DG(C9):DC(D2) chainA (192) TRP307 0 0 0 0 0 0 0 1 (202) ILE317 0 0 0 0 0 0 0 20 (203) PRO318 0 0 0 0 0 0 0 18 (204) ALA319 0 0 0 0 0 0 0 1 (206) TYR321 0 0 0 0 0 0 0 4 chainB (185) TRP307 1 0 0 0 0 0 0 0 (195) ILE317 23 0 0 0 0 0 0 0 (196) PRO318 16 0 0 0 0 0 0 0 (199) TYR321 7 0 0 0 0 0 0 0 prot.sequence kgledsstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytWdtkannnlrIPAaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl/tisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytWdtkannnlrIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >5inp_B:DNase_I-like; title=MOUSE TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-MN2+ COMPLEX organism=Mus musculus DNA sequence DC(C2):DG(D9) DG(C3):DC(D8) DA(C4):DT(D7) DA(C5):DT(D6) DT(C6):DA(D5) DT(C7):DA(D4) DC(C8):DG(D3) DG(C9):DC(D2) chainB (185) TRP307 1 0 0 0 0 0 0 0 (195) ILE317 23 0 0 0 0 0 0 0 (196) PRO318 16 0 0 0 0 0 0 0 (199) TYR321 7 0 0 0 0 0 0 0 prot.sequence tisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytWdtkannnlrIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >5inq_A:DNase_I-like; title=MOUSE TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-CA2+ COMPLEX organism=Mus musculus DNA sequence DC(D2):DG(C9) DG(D3):DC(C8) DA(D4):DT(C7) DA(D5):DT(C6) DT(D6):DA(C5) DT(D7):DA(C4) DC(D8):DG(C3) DG(D9):DC(C2) chainA (202) ILE317 21 0 0 0 0 0 0 0 (203) PRO318 18 0 0 0 0 0 0 0 (204) ALA319 1 0 0 0 0 0 0 0 (206) TYR321 6 0 0 0 0 0 0 0 prot.sequence kgledsstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlrIPAaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >5inq_AB:DNase_I-like; title=MOUSE TDP2 REACTION PRODUCT (5'-PHOSPHORYLATED DNA)-CA2+ COMPLEX organism=Mus musculus DNA sequence DC(D2):DG(C9) DG(D3):DC(C8) DA(D4):DT(C7) DA(D5):DT(C6) DT(D6):DA(C5) DT(D7):DA(C4) DC(D8):DG(C3) DG(D9):DC(C2) chainA (202) ILE317 21 0 0 0 0 0 0 0 (203) PRO318 18 0 0 0 0 0 0 0 (204) ALA319 1 0 0 0 0 0 0 0 (206) TYR321 6 0 0 0 0 0 0 0 chainB (185) TRP307 0 0 0 0 0 0 0 1 (195) ILE317 0 0 0 0 0 0 0 27 (196) PRO318 0 0 0 0 0 0 0 16 (197) ALA319 0 0 0 0 0 0 0 1 (199) TYR321 0 0 0 0 0 0 0 5 prot.sequence kgledsstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlrIPAaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl/tisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytWdtkannnlrIPAaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >5ipl_CDF: title=SIGMAS-TRANSCRIPTION INITIATION COMPLEX WITH 4-NT NASCENT RNA organism=ESCHERICHIA COLI DNA sequence DC(24):DG(159) DC(25):DG(158) DG(26):DC(157) DC(27):DG(156) DG(28):DC(155) DT(29):DA(154) DC(210):DG(153) DA(211):DT(152) DG(212):DC(151) DA(213):DT(150) DC(214):DG(149) DT(215):DA(148) DC(216):DC(147) DG(217):DG(146) DT(218):DT(145) DA(219):DG(144) DG(220):DT(143) DG(221):DG(142) DA(222):DT(141) DT(223):DA(140) DT(224):DA(139) DA(225):DT(138) DT(226):DA(137) DA(227):DT(136) DG(228):DC(135) DC(229):DG(134) DA(230):DT(133) DT(231):DA(132) DA(232):DT(131) DC(233):DG(130) DG(234):DC(129) DT(235):DA(128) DG(236):DC(127) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG175 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 14 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (918) MET932 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 6) THR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) GLN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) LEU62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASN98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LEU101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) PHE134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 83) ASP135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 86) ARG138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 ( 88) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 89) ARG141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) THR144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) TYR145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 ( 95) THR147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) TRP148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 ( 97) TRP149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 ( 99) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 (100) GLN152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 (103) GLU155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (104) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 (106) ILE158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (107) MET159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (110) THR162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 (111) ARG163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 (117) ILE169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (118) HIS170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 29 0 0 0 0 (120) VAL172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (121) LYS173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 (124) ASN176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (127) LEU179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (166) ARG218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 (172) THR224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) LEU226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ASP229 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) GLU231 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) LYS232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveRavkerlslgdldtlmpqdminakpisaavkeffgSsqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltMrtfhiggaaskditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/rvldaTQlyLgeigYspLltaeeEvyfarralrgdvasrrrmiesNlRLvvkiarrygnRglalldlieegnlgliravekFDpeRgFRfSTYaTWWiRQtiERaIMnqTRtirlpIHiVKelNvyLrtarelshkldhepsaeeiaeqldkpvddvsrmlrlneRitsvdTpLggDsEKalldiladekengpedttqdddmkqsivkwlfelnakqrevlarrfgllgyeaatledvgreigltrervrqiqveglrrlreilqtqglniealfl >5ipl_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=SIGMAS-TRANSCRIPTION INITIATION COMPLEX WITH 4-NT NASCENT RNA organism=ESCHERICHIA COLI DNA sequence DC(24):DG(159) DC(25):DG(158) DG(26):DC(157) DC(27):DG(156) DG(28):DC(155) DT(29):DA(154) DC(210):DG(153) DA(211):DT(152) DG(212):DC(151) DA(213):DT(150) DC(214):DG(149) DT(215):DA(148) DC(216):DC(147) DG(217):DG(146) DT(218):DT(145) DA(219):DG(144) DG(220):DT(143) DG(221):DG(142) DA(222):DT(141) DT(223):DA(140) DT(224):DA(139) DA(225):DT(138) DT(226):DA(137) DA(227):DT(136) DG(228):DC(135) DC(229):DG(134) DA(230):DT(133) DT(231):DA(132) DA(232):DT(131) DC(233):DG(130) DG(234):DC(129) DT(235):DA(128) DG(236):DC(127) chainF ( 6) THR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) GLN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) LEU62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASN98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LEU101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) PHE134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 83) ASP135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 86) ARG138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 ( 88) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 89) ARG141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) THR144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) TYR145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 ( 95) THR147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) TRP148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 ( 97) TRP149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 ( 99) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 (100) GLN152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 (103) GLU155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (104) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 (106) ILE158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (107) MET159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (110) THR162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 (111) ARG163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 (117) ILE169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (118) HIS170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 29 0 0 0 0 (120) VAL172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (121) LYS173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 (124) ASN176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (127) LEU179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (166) ARG218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 (172) THR224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) LEU226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ASP229 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) GLU231 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) LYS232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rvldaTQlyLgeigYspLltaeeEvyfarralrgdvasrrrmiesNlRLvvkiarrygnRglalldlieegnlgliravekFDpeRgFRfSTYaTWWiRQtiERaIMnqTRtirlpIHiVKelNvyLrtarelshkldhepsaeeiaeqldkpvddvsrmlrlneRitsvdTpLggDsEKalldiladekengpedttqdddmkqsivkwlfelnakqrevlarrfgllgyeaatledvgreigltrervrqiqveglrrlreilqtqglniealfl >5ipm_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=SIGMAS-TRANSCRIPTION INITIATION COMPLEX WITH 4-NT NASCENT RNA organism=ESCHERICHIA COLI DNA sequence DC(24):DG(159) DC(25):DG(158) DG(26):DC(157) DC(27):DG(156) DG(28):DC(155) DT(29):DA(154) DC(210):DG(153) DA(211):DT(152) DG(212):DC(151) DA(213):DT(150) DC(214):DG(149) DT(215):DA(148) DC(216):DC(147) DG(217):DG(146) DT(218):DT(145) DA(219):DG(144) DG(220):DT(143) DG(221):DG(142) DA(222):DT(141) DT(223):DA(140) DT(224):DA(139) DA(225):DT(138) DT(226):DA(137) DA(227):DT(136) DG(228):DC(135) DC(229):DG(134) DA(230):DT(133) DT(231):DA(132) DA(232):DT(131) DC(233):DG(130) DG(234):DC(129) DT(235):DA(128) DG(236):DC(127) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG175 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 16 53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 17 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (479) LEU481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveRavkerlsLgdldtlmpqdminakpisaavkEffgSsqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >5ipm_CDF: title=SIGMAS-TRANSCRIPTION INITIATION COMPLEX WITH 4-NT NASCENT RNA organism=ESCHERICHIA COLI DNA sequence DC(127):DG(236) DA(128):DT(235) DC(129):DG(234) DG(130):DC(233) DT(131):DA(232) DA(132):DT(231) DT(133):DA(230) DG(134):DC(229) DC(135):DG(228) DT(136):DA(227) DA(137):DT(226) DT(138):DA(225) DA(139):DT(224) DA(140):DT(223) DT(141):DA(222) DG(142):DG(221) DT(143):DG(220) DG(144):DA(219) DT(145):DT(218) DG(146):DG(217) DC(147):DC(216) DA(148):DT(215) DG(149):DC(214) DT(150):DA(213) DC(151):DG(212) DT(152):DA(211) DG(153):DC(210) DA(154):DT(29) DC(155):DG(28) DG(156):DC(27) DC(157):DG(26) DG(158):DC(25) DG(159):DC(24) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (173) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53 16 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 17 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (479) LEU481 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 chainD (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (918) MET932 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 chainF ( 6) THR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) GLN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) LEU62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASN98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LEU101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG112 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) PHE134 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ASP135 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG138 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) PHE140 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) THR144 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) TYR145 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) THR147 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) TRP148 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) TRP149 0 0 0 0 0 0 0 0 1 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ARG151 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) GLN152 0 0 0 0 0 0 0 2 9 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) GLU155 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ARG156 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ILE158 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) MET159 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) THR162 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) ARG163 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ILE169 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) HIS170 0 0 0 0 27 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) VAL172 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) LYS173 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) ASN176 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) LEU179 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ARG218 0 0 0 0 0 0 0 0 0 0 0 5 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) THR224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) LEU226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ASP229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) GLU231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveRavkerlsLgdldtlmpqdminakpisaavkEffgSsqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltMrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/rvldaTQlyLgeigYspLltaeeEvyfarralrgdvasrrrmiesNlRLvvkiarrygnRglalldlieegnlgliravekFDpeRgFRfSTYaTWWiRQtiERaIMnqTRtirlpIHiVKelNvyLrtarelshkldhepsaeeiaeqldkpvddvsrmlrlneRitsvdTpLggDsEkalldiladekengpedttqdddmkqsivkwlfelnakqrevlarrfgllgyeaatledvgreigltrervrqiqveglrrlreilqtqglniealfl >5ipn_CDF: title=SIGMAS-TRANSCRIPTION INITIATION COMPLEX WITH 4-NT NASCENT RNA organism=ESCHERICHIA COLI DNA sequence DC(127):DG(236) DA(128):DT(235) DC(129):DG(234) DG(130):DC(233) DT(131):DA(232) DA(132):DT(231) DT(133):DA(230) DG(134):DC(229) DC(135):DG(228) DT(136):DA(227) DA(137):DT(226) DT(138):DA(225) DA(139):DT(224) DA(140):DT(223) DT(141):DA(222) DG(142):DG(221) DT(143):DG(220) DG(144):DA(219) DT(145):DT(218) DG(146):DG(217) DC(147):DC(216) DA(148):DT(215) DG(149):DC(214) DT(150):DA(213) DC(151):DG(212) DT(152):DA(211) DG(153):DC(210) DA(154):DT(29) DC(155):DG(28) DG(156):DC(27) DC(157):DG(26) DG(158):DC(25) DG(159):DC(24) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (173) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 12 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 16 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (479) LEU481 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 chainD (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 chainF ( 6) THR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) GLN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) LEU62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASN98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LEU101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG112 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) PHE134 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ASP135 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG138 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) PHE140 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) THR144 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) TYR145 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) THR147 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) TRP148 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) TRP149 0 0 0 0 0 0 0 0 2 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ARG151 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) GLN152 0 0 0 0 0 0 0 2 9 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) GLU155 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ARG156 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ILE158 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) MET159 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) THR162 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) ARG163 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ILE169 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) HIS170 0 0 0 0 21 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) VAL172 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) LYS173 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) ASN176 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) LEU179 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ARG218 0 0 0 0 0 0 0 0 0 0 0 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) LEU226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ASP229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) GLU231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 0 0 0 0 (180) LYS232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvridRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveRavkerlsLgdldtlmpqdminakpisaavkeffgSsqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/rvldaTQlyLgeigYspLltaeeEvyfarralrgdvasrrrmiesNlRLvvkiarrygnRglalldlieegnlgliravekFDpeRgFRfSTYaTWWiRQtiERaIMnqTRtirlpIHiVKelNvyLrtarelshkldhepsaeeiaeqldkpvddvsrmlrlneRitsvdtpLggDsEKalldiladekengpedttqdddmkqsivkwlfelnakqrevlarrfgllgyeaatledvgreigltrervrqiqveglrrlreilqtqglniealfl >5ipn_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=SIGMAS-TRANSCRIPTION INITIATION COMPLEX WITH 4-NT NASCENT RNA organism=ESCHERICHIA COLI DNA sequence DC(127):DG(236) DA(128):DT(235) DC(129):DG(234) DG(130):DC(233) DT(131):DA(232) DA(132):DT(231) DT(133):DA(230) DG(134):DC(229) DC(135):DG(228) DT(136):DA(227) DA(137):DT(226) DT(138):DA(225) DA(139):DT(224) DA(140):DT(223) DT(141):DA(222) DG(142):DG(221) DT(143):DG(220) DG(144):DA(219) DT(145):DT(218) DG(146):DG(217) DC(147):DC(216) DA(148):DT(215) DG(149):DC(214) DT(150):DA(213) DC(151):DG(212) DT(152):DA(211) DG(153):DC(210) DA(154):DT(29) DC(155):DG(28) DG(156):DC(27) DC(157):DG(26) DG(158):DC(25) DG(159):DC(24) chainD (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >5itr_B:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN NEIL1(P2G) BOUND TO DUPLEX DNA CONTAINING THF organism=Homo sapiens DNA sequence DC(E1):DG(E27) DG(E2):DC(E26) DT(E3):DA(E25) DC(E4):DG(E24) DC(E5):DG(E23) DA(E6):DT(E22) DC(E7):DC(E21) DG(E8):DC(E20) DT(E9):DA(E19) DC(E10):DG(E18) DT(E11):DA(E17) DA(E12):DT(E16) chainB ( 80) MET81 0 0 0 0 0 0 0 4 0 0 0 0 (117) ARG118 0 0 0 0 0 74 15 0 0 0 0 0 (119) PHE120 0 0 0 0 0 0 15 46 0 0 0 0 (248) ARG277 0 0 0 0 0 0 0 10 0 0 0 0 prot.sequence pegpelhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlilsplpgaqpqqeplalvfrfgMsgsfqlvpreelprhahlrfytappgprlalcfvdiRrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignylraeilyrlkippfekarsvlealqnpdllelchsvpkevvqlggrgyaafrawlrcygmpgmsslqdrhgRtiwfqgdpgplap >5itt_B:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN NEIL1 BOUND TO DUPLEX DNA CONTAINING THF organism=Homo sapiens DNA sequence DC(E1):DA(E27) DG(E2):DC(E26) DT(E3):DA(E25) DC(E4):DG(E24) DC(E5):DG(E23) DA(E6):DT(E22) DC(E7):DC(E21) DG(E8):DC(E20) DT(E9):DA(E19) DC(E10):DG(E18) DT(E11):DA(E17) DA(E12):DT(E16) chainB ( 80) MET81 0 0 0 0 0 0 0 3 0 0 0 0 (116) ILE117 0 0 0 0 0 2 0 0 0 0 0 0 (117) ARG118 0 0 0 0 0 74 16 0 0 0 0 0 (119) PHE120 0 0 0 0 0 0 12 47 0 0 0 0 (248) ARG277 0 0 0 0 0 0 0 7 0 0 0 0 prot.sequence pegpelhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlilsplpgaqpqqeplalvfrfgMsgsfqlvpreelprhahlrfytappgprlalcfvdIRrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignylraeilyrlkippfekarsvlealqnpdllelchsvpkevvqlggrgyaafrawlrcygmpgmsslqdrhgRtiwfqgdpgplap >5itu_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN NEIL1(242K) BOUND TO DUPLEX DNA CONTAINING THF organism=Homo sapiens DNA sequence DC(D1):DG(E12) DG(D2):DC(E11) DT(D3):DA(E10) DC(D4):DG(E9) DC(D5):DG(E8) DA(D6):DT(E7) DC(D7):DC(E6) DG(D8):DC(E5) DT(D9):DA(E4) DC(D10):DG(E3) DA(D12):DT(E1) DC(D13):DG(I13) DC(H1):DG(I12) DG(H2):DC(I11) DT(H3):DA(I10) DC(H4):DG(I9) DC(H5):DG(I8) DA(H6):DT(I7) DC(H7):DC(I6) DG(H8):DC(I5) DT(H9):DA(I4) DC(H10):DG(I3) DT(H11):DA(I2) DA(H12):DT(I1) chainA ( 80) MET81 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ILE117 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ARG118 0 0 0 0 0 84 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) PHE120 0 0 0 0 0 0 11 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) HIS275 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG277 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pegpelhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlilsplpgaqpqqeplalvfrfgMsgsfqlvpreelprhahlrfytappgprlalcfvdIRrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignylraeilyrlkippfekarsvlealnpdllelchsvpkevvqlggkgygssgeedfaafrawlrcygmpgmsslqdrHgRtiwfqgdpgplap >5iud_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HUMAN DNA POLYMERASE ALPHA IN BINARY COMPLEX WITH A DNA:DNA TEMPLATE- PRIMER organism=Homo sapiens DNA sequence DA(C1):DT(B18) DT(C2):DA(B17) DC(C3):DG(B16) DC(C4):DG(B15) DT(C5):DA(B14) DT(C6):DA(B13) DC(C7):DG(B12) DC(C8):DG(B11) DC(C9):DG(B10) DC(C10):DG(B9) DT(C11):DA(B8) DA(C12):DT(B7) DC(C13):DG(B6) chainA (571) TYR957 0 0 0 0 0 0 0 0 0 0 0 0 1 (617) THR1003 0 0 0 0 0 0 0 0 0 0 0 0 1 (667) LYS1053 0 0 0 0 0 0 0 0 0 0 4 7 0 (695) ARG1081 0 0 0 0 0 0 0 0 5 7 0 0 0 prot.sequence eqvfhfywldayedqynqpgvvflfgkvwiesaethvsccvmvkniertlyflpremkidlntgketgtpismkdvyeefdekiatkykimkfkskpveknyafeipdvpekseylevkysaempqlpqdlkgetfshvfgtntsslelflmnrkikgpcwlevkspqllnqpvswckveamalkpdlvnvikdvsppplvvmafsmktmqnaknhqneiiamaalvhhsfaldkaapkppfqshfcvvskpkdcifpyafkeviekknvkvevaatertllgfflakvhkidpdiivghniygfelevllqrinvckaphwskigrlkrsnmpklgernatcgrmicdveisakelircksyhlselvqqilktervvipmeniqnmysessqllyllehtwkdakfilqimcelnvlplalqitniagnimsrtlmggrserneflllhafyennyivpdkqikaayagglvldpkvgfydkfillldfnslypsiiqefnicfttvqripelpdpslemgilpreirklverrkqvkqlmkqqdlnpdlilqydirqkalkltansmYgclgfsysrfyakplaalvtykgreilmhtkemvqkmnleviygdTdsimintnstnleevfklgnkvksevnklyklleididgvfksllllkkKkyaalvveptsdgnyvtkqelkgldivRrdwcdlakdtgnfvigqilsdqsrdtiveniqkrlieigenvlngsvpvsqfeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtvsyvicqdgsnltasqrayapeqlqkqdnltidtqyylaqqihpvvaricepidgidavliatwlgldptq >5ivw_V:P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN CORE TFIIH BOUND TO DNA WITHIN THE PIC organism=HOMO SAPIENS DNA sequence DT(X2):DA(Y19) DT(X3):DA(Y18) DG(X4):DC(Y17) DC(X5):DG(Y16) DC(X6):DG(Y15) DG(X7):DC(Y14) DA(X8):DT(Y13) DA(X9):DT(Y12) DG(X10):DC(Y11) DA(X11):DT(Y10) DC(X12):DG(Y9) DG(X13):DC(Y8) DA(X14):DT(Y7) DA(X15):DT(Y6) DA(X16):DT(Y5) DA(X17):DT(Y4) DA(X18):DT(Y3) DA(X19):DT(Y2) chainV (170) LEU413 0 0 0 0 0 0 0 0 0 2 3 3 0 0 0 0 0 0 prot.sequence ipmdlfdfyeqmdkdeeeeeetqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmLghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvla >5iwi_AB:Type_II_DNA_topoisomerase; title=1.98A STRUCTURE OF GSK945237 WITH S.AUREUS DNA GYRASE AND SINGLY NICKED DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DG(G2009):DC(E12) DT(G2010):DA(E11) DA(G2011):DT(E10) DC(G2012):DG(E9) DC(G2013):DG(E8) DT(G2014):DA(E7) DA(G2015):DT(E6) DC(G2016):DG(E5) DG(G2017):DC(E4) DG(G2018):DC(E3) DC(G2019):DG(E2) chainB ( 46) LYS460 0 0 0 0 4 2 0 0 0 0 0 chainA ( 77) SER85 0 0 0 0 0 2 0 0 0 0 0 (167) ILE175 0 0 0 0 0 0 0 19 19 0 0 prot.sequence inernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/pgkladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavya >5iwi_C:Type_II_DNA_topoisomerase; title=1.98A STRUCTURE OF GSK945237 WITH S.AUREUS DNA GYRASE AND SINGLY NICKED DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DG(E2):DC(G2019) DC(E3):DG(G2018) DC(E4):DG(G2017) DG(E5):DC(G2016) DT(E6):DA(G2015) DA(E7):DT(G2014) DG(E8):DC(G2013) DG(E9):DC(G2012) DT(E10):DA(G2011) DA(E11):DT(G2010) DC(E12):DG(G2009) DA(E13):DT(F1008) DC(E14):DG(F1007) DC(E15):DG(F1006) DG(E16):DC(F1005) DC(E17):DG(F1004) DA(E18):DT(F1003) DC(E19):DG(F1002) DA(E20):DT(F1001) chainC ( 16) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 76) SER85 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (113) ARG122 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 (166) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 22 0 0 0 prot.sequence nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >5iwi_CD:Type_II_DNA_topoisomerase; title=1.98A STRUCTURE OF GSK945237 WITH S.AUREUS DNA GYRASE AND SINGLY NICKED DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DT(F1001):DA(E20) DG(F1002):DC(E19) DT(F1003):DA(E18) DG(F1004):DC(E17) DC(F1005):DG(E16) DG(F1006):DC(E15) DG(F1007):DC(E14) DT(F1008):DA(E13) DG(G2009):DC(E12) DT(G2010):DA(E11) DA(G2011):DT(E10) DC(G2012):DG(E9) DC(G2013):DG(E8) DT(G2014):DA(E7) DA(G2015):DT(E6) DC(G2016):DG(E5) DG(G2017):DC(E4) DG(G2018):DC(E3) DC(G2019):DG(E2) chainD ( 44) LYS460 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 chainC ( 16) TYR25 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) SER85 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (113) ARG122 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (166) ILE175 0 0 0 22 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >5iwi_D:Type_II_DNA_topoisomerase; title=1.98A STRUCTURE OF GSK945237 WITH S.AUREUS DNA GYRASE AND SINGLY NICKED DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(E2):DC(G2019) DC(E3):DG(G2018) DC(E4):DG(G2017) DG(E5):DC(G2016) DT(E6):DA(G2015) DA(E7):DT(G2014) DG(E8):DC(G2013) DG(E9):DC(G2012) DT(E10):DA(G2011) DA(E11):DT(G2010) DC(E12):DG(G2009) DA(E13):DT(F1008) DC(E14):DG(F1007) DC(E15):DG(F1006) DG(E16):DC(F1005) DC(E17):DG(F1004) DA(E18):DT(F1003) DC(E19):DG(F1002) DA(E20):DT(F1001) chainD ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >5iwm_ABCD:Type_II_DNA_topoisomerase; title=2.5A STRUCTURE OF GSK945237 WITH S.AUREUS DNA GYRASE AND DNA. organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(E2):DC(F19) DC(E3):DG(F18) DC(E4):DG(F17) DG(E5):DC(F16) DT(E6):DA(F15) DA(E7):DT(F14) DG(E8):DC(F13) DG(E9):DC(F12) DT(E10):DA(F11) DT(E11):DA(F10) DC(E12):DG(F9) DA(E13):DT(F8) DC(E14):DG(F7) DC(E15):DG(F6) DG(E16):DC(F5) DC(E17):DG(F4) DA(E18):DT(F3) DC(E19):DG(F2) DA(E20):DT(F1) chainB ( 44) LYS460 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 25) ARG33 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) SER85 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ILE175 0 0 19 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 chainC ( 16) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 76) SER85 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (166) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 22 0 0 0 (171) ALA180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence inernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy/nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmAtnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >5iwm_C:Type_II_DNA_topoisomerase; title=2.5A STRUCTURE OF GSK945237 WITH S.AUREUS DNA GYRASE AND DNA. organism=? DNA sequence DT(F1):DA(E20) DG(F2):DC(E19) DT(F3):DA(E18) DG(F4):DC(E17) DC(F5):DG(E16) DG(F6):DC(E15) DG(F7):DC(E14) DT(F8):DA(E13) DG(F9):DC(E12) DA(F10):DT(E11) DA(F11):DT(E10) DC(F12):DG(E9) DC(F13):DG(E8) DT(F14):DA(E7) DA(F15):DT(E6) DC(F16):DG(E5) DG(F17):DC(E4) DG(F18):DC(E3) DC(F19):DG(E2) chainC ( 16) TYR25 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) SER85 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE175 0 0 0 22 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ALA180 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmAtnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >5iy6_AMPTV:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN HOLO-PIC IN THE CLOSED STATE organism=HOMO SAPIENS DNA sequence DG(X1):DC(Y93) DA(X2):DT(Y92) DA(X3):DT(Y91) DG(X4):DC(Y90) DG(X5):DC(Y89) DG(X6):DC(Y88) DC(X7):DG(Y87) DG(X8):DC(Y86) DC(X9):DG(Y85) DC(X10):DG(Y84) DT(X11):DA(Y83) DA(X12):DT(Y82) DT(X13):DA(Y81) DA(X14):DT(Y80) DA(X15):DT(Y79) DA(X16):DT(Y78) DA(X17):DT(Y77) DG(X18):DC(Y76) DG(X19):DC(Y75) DG(X20):DC(Y74) DG(X21):DC(Y73) DG(X22):DC(Y72) DT(X23):DA(Y71) DG(X24):DC(Y70) DG(X25):DC(Y69) DG(X26):DC(Y68) DG(X27):DC(Y67) DG(X28):DC(Y66) DC(X29):DG(Y65) DG(X30):DC(Y64) DC(X31):DG(Y63) DG(X32):DC(Y62) DT(X33):DA(Y61) DT(X34):DA(Y60) DC(X35):DG(Y59) DG(X36):DC(Y58) DT(X37):DA(Y57) DC(X38):DG(Y56) DC(X39):DG(Y55) DT(X40):DA(Y54) DC(X41):DG(Y53) DA(X42):DT(Y52) DG(X43):DC(Y51) DT(X44):DA(Y50) DC(X45):DG(Y49) DG(X46):DC(Y48) DC(X47):DG(Y47) DG(X48):DC(Y46) DA(X49):DT(Y45) DT(X50):DA(Y44) DC(X51):DG(Y43) DG(X52):DC(Y42) DA(X53):DT(Y41) DA(X54):DT(Y40) DC(X55):DG(Y39) DA(X56):DT(Y38) DC(X57):DG(Y37) DT(X58):DA(Y36) DC(X59):DG(Y35) DG(X60):DC(Y34) DA(X61):DT(Y33) DG(X62):DC(Y32) DC(X63):DG(Y31) DC(X64):DG(Y30) chainA chainM chainP ( 15) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PHE288 0 0 0 0 0 0 0 0 0 0 3 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) PRO289 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) PHE305 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 15 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainV (170) LEU413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggghggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitrhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/ldalprvtcpnhpdailvedyragdmicpecglvvgdrvidvgsewrtrtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/tpasessgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmvcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgiHkntwelkpe/ipmdlfdfyeqmdkdeeeeeetqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmLghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvla >5iy6_N:Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain; title=HUMAN HOLO-PIC IN THE CLOSED STATE organism=? DNA sequence DC(Y29) DG(Y30) DG(Y31) DC(Y32) DT(Y33) DC(Y34) DG(Y35) DA(Y36) DG(Y37) DT(Y38) DG(Y39) DT(Y40) DT(Y41) DC(Y42) DG(Y43) DA(Y44) DT(Y45) DC(Y46) DG(Y47) DC(Y48) DG(Y49) DA(Y50) DC(Y51) DT(Y52) DG(Y53) DA(Y54) DG(Y55) DG(Y56) DA(Y57) DC(Y58) DG(Y59) DA(Y60) DA(Y61) DC(Y62) DG(Y63) DC(Y64) DG(Y65) DC(Y66) DC(Y67) DC(Y68) DC(Y69) DC(Y70) DA(Y71) DC(Y72) DC(Y73) DC(Y74) DC(Y75) DC(Y76) DT(Y77) DT(Y78) DT(Y79) DT(Y80) DA(Y81) DT(Y82) DA(Y83) DG(Y84) DG(Y85) DC(Y86) DG(Y87) DC(Y88) DC(Y89) DC(Y90) DT(Y91) DT(Y92) DC(Y93) chainN ( 83) LYS346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqveeeplnseddvsdeegqelfdtenvvvcqydkihrsKnkwkfhlkdgimnlngrdyifskaigdaew >5iy6_P:TATA-box_binding_protein-like; title=HUMAN HOLO-PIC IN THE CLOSED STATE organism=? DNA sequence DG(Y30):DC(X64) DG(Y31):DC(X63) DC(Y32):DG(X62) DT(Y33):DA(X61) DC(Y34):DG(X60) DG(Y35):DC(X59) DA(Y36):DT(X58) DG(Y37):DC(X57) DT(Y38):DA(X56) DG(Y39):DC(X55) DT(Y40):DA(X54) DT(Y41):DA(X53) DC(Y42):DG(X52) DG(Y43):DC(X51) DA(Y44):DT(X50) DT(Y45):DA(X49) DC(Y46):DG(X48) DG(Y47):DC(X47) DC(Y48):DG(X46) DG(Y49):DC(X45) DA(Y50):DT(X44) DC(Y51):DG(X43) DT(Y52):DA(X42) DG(Y53):DC(X41) DA(Y54):DT(X40) DG(Y55):DC(X39) DG(Y56):DC(X38) DA(Y57):DT(X37) DC(Y58):DG(X36) DG(Y59):DC(X35) DA(Y60):DT(X34) DA(Y61):DT(X33) DC(Y62):DG(X32) DG(Y63):DC(X31) DC(Y64):DG(X30) DG(Y65):DC(X29) DC(Y66):DG(X28) DC(Y67):DG(X27) DC(Y68):DG(X26) DC(Y69):DG(X25) DC(Y70):DG(X24) DA(Y71):DT(X23) DC(Y72):DG(X22) DC(Y73):DG(X21) DC(Y74):DG(X20) DC(Y75):DG(X19) DC(Y76):DG(X18) DT(Y77):DA(X17) DT(Y78):DA(X16) DT(Y79):DA(X15) DT(Y80):DA(X14) DA(Y81):DT(X13) DT(Y82):DA(X12) DA(Y83):DT(X11) DG(Y84):DC(X10) DG(Y85):DC(X9) DC(Y86):DG(X8) DG(Y87):DC(X7) DC(Y88):DG(X6) DC(Y89):DG(X5) DC(Y90):DG(X4) DT(Y91):DA(X3) DT(Y92):DA(X2) DC(Y93):DG(X1) chainP ( 15) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 3 0 0 0 0 0 0 0 0 0 0 (137) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (151) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (153) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (159) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpasessgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmvcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk >5iy6_T:Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=HUMAN HOLO-PIC IN THE CLOSED STATE organism=HOMO SAPIENS DNA sequence DG(X1):DC(Y93) DA(X2):DT(Y92) DA(X3):DT(Y91) DG(X4):DC(Y90) DG(X5):DC(Y89) DG(X6):DC(Y88) DC(X7):DG(Y87) DG(X8):DC(Y86) DC(X9):DG(Y85) DC(X10):DG(Y84) DT(X11):DA(Y83) DA(X12):DT(Y82) DT(X13):DA(Y81) DA(X14):DT(Y80) DA(X15):DT(Y79) DA(X16):DT(Y78) DA(X17):DT(Y77) DG(X18):DC(Y76) DG(X19):DC(Y75) DG(X20):DC(Y74) DG(X21):DC(Y73) DG(X22):DC(Y72) DT(X23):DA(Y71) DG(X24):DC(Y70) DG(X25):DC(Y69) DG(X26):DC(Y68) DG(X27):DC(Y67) DG(X28):DC(Y66) DC(X29):DG(Y65) DG(X30):DC(Y64) DC(X31):DG(Y63) DG(X32):DC(Y62) DT(X33):DA(Y61) DT(X34):DA(Y60) DC(X35):DG(Y59) DG(X36):DC(Y58) DT(X37):DA(Y57) DC(X38):DG(Y56) DC(X39):DG(Y55) DT(X40):DA(Y54) DC(X41):DG(Y53) DA(X42):DT(Y52) DG(X43):DC(Y51) DT(X44):DA(Y50) DC(X45):DG(Y49) DG(X46):DC(Y48) DC(X47):DG(Y47) DG(X48):DC(Y46) DA(X49):DT(Y45) DT(X50):DA(Y44) DC(X51):DG(Y43) DG(X52):DC(Y42) DA(X53):DT(Y41) DA(X54):DT(Y40) DC(X55):DG(Y39) DA(X56):DT(Y38) DC(X57):DG(Y37) DT(X58):DA(Y36) DC(X59):DG(Y35) DG(X60):DC(Y34) DA(X61):DT(Y33) DG(X62):DC(Y32) DC(X63):DG(Y31) DC(X64):DG(Y30) chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 15 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgiHkntwelkpe >5iy6_V:P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN HOLO-PIC IN THE CLOSED STATE organism=? DNA sequence DG(Y30):DC(X64) DG(Y31):DC(X63) DC(Y32):DG(X62) DT(Y33):DA(X61) DC(Y34):DG(X60) DG(Y35):DC(X59) DA(Y36):DT(X58) DG(Y37):DC(X57) DT(Y38):DA(X56) DG(Y39):DC(X55) DT(Y40):DA(X54) DT(Y41):DA(X53) DC(Y42):DG(X52) DG(Y43):DC(X51) DA(Y44):DT(X50) DT(Y45):DA(X49) DC(Y46):DG(X48) DG(Y47):DC(X47) DC(Y48):DG(X46) DG(Y49):DC(X45) DA(Y50):DT(X44) DC(Y51):DG(X43) DT(Y52):DA(X42) DG(Y53):DC(X41) DA(Y54):DT(X40) DG(Y55):DC(X39) DG(Y56):DC(X38) DA(Y57):DT(X37) DC(Y58):DG(X36) DG(Y59):DC(X35) DA(Y60):DT(X34) DA(Y61):DT(X33) DC(Y62):DG(X32) DG(Y63):DC(X31) DC(Y64):DG(X30) DG(Y65):DC(X29) DC(Y66):DG(X28) DC(Y67):DG(X27) DC(Y68):DG(X26) DC(Y69):DG(X25) DC(Y70):DG(X24) DA(Y71):DT(X23) DC(Y72):DG(X22) DC(Y73):DG(X21) DC(Y74):DG(X20) DC(Y75):DG(X19) DC(Y76):DG(X18) DT(Y77):DA(X17) DT(Y78):DA(X16) DT(Y79):DA(X15) DT(Y80):DA(X14) DA(Y81):DT(X13) DT(Y82):DA(X12) DA(Y83):DT(X11) DG(Y84):DC(X10) DG(Y85):DC(X9) DC(Y86):DG(X8) DG(Y87):DC(X7) DC(Y88):DG(X6) DC(Y89):DG(X5) DC(Y90):DG(X4) DT(Y91):DA(X3) DT(Y92):DA(X2) DC(Y93):DG(X1) chainV (170) LEU413 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ipmdlfdfyeqmdkdeeeeeetqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmLghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvla >5iy7_ABEMNPTV:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN HOLO-PIC IN THE OPEN STATE organism=HOMO SAPIENS DNA sequence DG(X1):DC(Y93) DA(X2):DT(Y92) DA(X3):DT(Y91) DG(X4):DC(Y90) DG(X5):DC(Y89) DG(X6):DC(Y88) DC(X7):DG(Y87) DG(X8):DC(Y86) DC(X9):DG(Y85) DC(X10):DG(Y84) DT(X11):DA(Y83) DA(X12):DT(Y82) DT(X13):DA(Y81) DA(X14):DT(Y80) DA(X15):DT(Y79) DA(X16):DT(Y78) DA(X17):DT(Y77) DG(X18):DC(Y76) DG(X19):DC(Y75) DG(X20):DC(Y74) DG(X21):DC(Y73) DG(X22):DC(Y72) DT(X23):DA(Y71) DG(X24):DC(Y70) DG(X25):DC(Y69) DG(X26):DC(Y68) DG(X27):DC(Y67) DG(X28):DC(Y66) DC(X29):DG(Y65) DG(X30):DC(Y64) DC(X31):DG(Y63) DG(X32):DC(Y62) DA(X33):DA(Y61) DA(X34):DA(Y60) DT(X35):DG(Y59) DT(X36):DC(Y58) DT(X37):DA(Y57) DT(X38):DG(Y56) DT(X39):DG(Y55) DT(X40):DA(Y54) DT(X41):DG(Y53) DT(X42):DT(Y52) DT(X43):DC(Y51) DT(X44):DA(Y50) DC(X45):DG(Y49) DG(X46):DC(Y48) DC(X47):DG(Y47) DG(X48):DC(Y46) DA(X49):DT(Y45) DT(X50):DA(Y44) DC(X51):DG(Y43) DG(X52):DC(Y42) DA(X53):DT(Y41) DA(X54):DT(Y40) DC(X55):DG(Y39) DA(X56):DT(Y38) DC(X57):DG(Y37) DT(X58):DA(Y36) DC(X59):DG(Y35) DG(X60):DC(Y34) DA(X61):DT(Y33) DG(X62):DC(Y32) DC(X63):DG(Y31) DC(X64):DG(Y30) DG(X65):DC(Y29) DA(X66):DT(Y28) DG(X67):DC(Y27) DC(X68):DG(Y26) DA(X69):DT(Y25) DG(X70):DC(Y24) DA(X71):DT(Y23) DC(X72):DG(Y22) DG(X73):DC(Y21) DT(X74):DA(Y20) DG(X75):DC(Y19) DC(X76):DG(Y18) DC(X77):DG(Y17) chainA (300) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) LYS346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1385) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (253) TYR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) LYS458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (483) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (509) HIS518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainM ( 50) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ASP58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) LYS59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ALA60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASP69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) GLN71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ASN98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) SER99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) LYS100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) THR106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) MET107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ARG112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) MET115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainP ( 15) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PHE288 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) PRO289 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) LEU303 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) PHE305 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) VAL311 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR313 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainV (170) LEU413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggghggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgKegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/ydedddeitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpYikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkKahqaragvsqvlnrltfastlshlrrlnspigrDgklakprqlhntlwgmvcpaetpegHavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedelestnrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/mddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqsgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq/ldalprvtcpnhpdailvedyragdmicpecglvvgdrvidvgsewrtfSNDKATkdpsRvgDSQnpllsdgdlstmigKgtgaasfdefgNSKyqNRrTMsssdRamMnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqveeePLNSEDdvsdEegQELfdtenvvvcqydkiHrsknkwkfhlkDGImnLNgRDyifsKaiGdaew/tpasessgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgiHkntwelkpe/ipmdlfdfyeqmdkdeeeeeetqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmLghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvla >5iy7_P:TATA-box_binding_protein-like; title=HUMAN HOLO-PIC IN THE OPEN STATE organism=? DNA sequence DG(X1):DC(Y93) DA(X2):DT(Y92) DA(X3):DT(Y91) DG(X4):DC(Y90) DG(X5):DC(Y89) DG(X6):DC(Y88) DC(X7):DG(Y87) DG(X8):DC(Y86) DC(X9):DG(Y85) DC(X10):DG(Y84) DT(X11):DA(Y83) DA(X12):DT(Y82) DT(X13):DA(Y81) DA(X14):DT(Y80) DA(X15):DT(Y79) DA(X16):DT(Y78) DA(X17):DT(Y77) DG(X18):DC(Y76) DG(X19):DC(Y75) DG(X20):DC(Y74) DG(X21):DC(Y73) DG(X22):DC(Y72) DT(X23):DA(Y71) DG(X24):DC(Y70) DG(X25):DC(Y69) DG(X26):DC(Y68) DG(X27):DC(Y67) DG(X28):DC(Y66) DC(X29):DG(Y65) DG(X30):DC(Y64) DC(X31):DG(Y63) DG(X32):DC(Y62) DA(X33):DA(Y61) DA(X34):DA(Y60) DT(X35):DG(Y59) DT(X36):DC(Y58) DT(X37):DA(Y57) DT(X38):DG(Y56) DT(X39):DG(Y55) DT(X40):DA(Y54) DT(X41):DG(Y53) DT(X42):DT(Y52) DT(X43):DC(Y51) DT(X44):DA(Y50) DC(X45):DG(Y49) DG(X46):DC(Y48) DC(X47):DG(Y47) DG(X48):DC(Y46) DA(X49):DT(Y45) DT(X50):DA(Y44) DC(X51):DG(Y43) DG(X52):DC(Y42) DA(X53):DT(Y41) DA(X54):DT(Y40) DC(X55):DG(Y39) DA(X56):DT(Y38) DC(X57):DG(Y37) DT(X58):DA(Y36) DC(X59):DG(Y35) DG(X60):DC(Y34) DA(X61):DT(Y33) DG(X62):DC(Y32) DC(X63):DG(Y31) DC(X64):DG(Y30) DG(X65):DC(Y29) DA(X66):DT(Y28) DG(X67):DC(Y27) DC(X68):DG(Y26) DA(X69):DT(Y25) DG(X70):DC(Y24) DA(X71):DT(Y23) DC(X72):DG(Y22) DG(X73):DC(Y21) DT(X74):DA(Y20) DG(X75):DC(Y19) DC(X76):DG(Y18) DC(X77):DG(Y17) chainP ( 15) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PHE288 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) PRO289 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) LEU303 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) PHE305 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) VAL311 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR313 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpasessgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk >5iy8_ABEMNPTV:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN HOLO-PIC IN THE INITIAL TRANSCRIBING STATE organism=HOMO SAPIENS DNA sequence DG(X1):DC(Y93) DA(X2):DT(Y92) DA(X3):DT(Y91) DG(X4):DC(Y90) DG(X5):DC(Y89) DG(X6):DC(Y88) DC(X7):DG(Y87) DG(X8):DC(Y86) DC(X9):DG(Y85) DC(X10):DG(Y84) DT(X11):DA(Y83) DA(X12):DT(Y82) DT(X13):DA(Y81) DA(X14):DT(Y80) DA(X15):DC(Y79) DA(X16):DT(Y78) DA(X17):DT(Y77) DG(X18):DC(Y76) DG(X19):DC(Y75) DG(X20):DC(Y74) DG(X21):DC(Y73) DG(X22):DC(Y72) DT(X23):DA(Y71) DG(X24):DC(Y70) DG(X25):DC(Y69) DG(X26):DC(Y68) DG(X27):DC(Y67) DG(X28):DC(Y66) DC(X29):DG(Y65) DG(X30):DC(Y64) DT(X31):DG(Y63) DT(X32):DC(Y62) DT(X33):DA(Y61) DT(X34):DA(Y60) DT(X35):DG(Y59) DT(X36):DC(Y58) DT(X37):DA(Y57) DT(X38):DG(Y56) DT(X39):DG(Y55) DT(X40):DA(Y54) DT(X41):DG(Y53) DT(X42):DT(Y52) DT(X43):DC(Y51) DT(X44):DA(Y50) DT(X45):DG(Y49) DT(X46):DC(Y48) DT(X47):DG(Y47) DT(X48):DC(Y46) DT(X49):DT(Y45) DT(X50):DA(Y44) DC(X51):DG(Y43) DG(X52):DC(Y42) DA(X53):DT(Y41) DA(X54):DT(Y40) DC(X55):DG(Y39) DA(X56):DT(Y38) DC(X57):DG(Y37) DT(X58):DA(Y36) DC(X59):DG(Y35) DA(X61):DT(Y33) DG(X62):DC(Y32) DC(X63):DG(Y31) DC(X64):DG(Y30) DG(X65):DC(Y29) DA(X66):DT(Y28) DG(X67):DC(Y27) DC(X68):DG(Y26) DA(X69):DT(Y25) DG(X70):DC(Y24) DA(X71):DT(Y23) DC(X72):DG(Y22) DG(X73):DC(Y21) DT(X74):DA(Y20) DG(X75):DC(Y19) DC(X76):DG(Y18) DC(X77):DG(Y17) DT(X78):DA(Y16) DA(X79):DT(Y15) DC(X80):DG(Y14) DG(X81):DC(Y13) DG(X82):DC(Y12) chainA (235) MET266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (823) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1385) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (227) TRP236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) TYR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) LYS334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) TYR338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) LYS413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) LYS458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (480) ILE489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (485) LYS494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1071) ARG1080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainM ( 47) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) PHE55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ALA60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) THR106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ARG112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ASN116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) LYS119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainP ( 15) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PHE288 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) PRO289 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) LEU303 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) PHE305 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) VAL311 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR313 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) ILE228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainV (170) LEU413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 0 0 prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggghggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/ydedddeitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiWvsmlarggqgakksaigqrivatlpYikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkeKrikYakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllKevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkKahQaragvsqvlnrltfastlshlrrlnspIgrdgKlakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedelestnrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsRdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/mddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqsgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq/ldalprvtcpnhpdailvedyragdmicpecglvvgdrvidvgsewRtFSNdkAtkdpsrvgdSqNpllsdgdlstmigKgtgaasfdefgnskyqNrRTmsssdRammNafKeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqvEeEPLnsEddvsdeegqElFdtenvvvcqydkiHrsknkwkfhlkdgimnLnGRdyifsKaigDaeW/tpasessgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmvgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgIHkntwelkpe/ipmdlfdfyeqmdkdeeeeeetqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmLghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvla >5iy8_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=HUMAN HOLO-PIC IN THE INITIAL TRANSCRIBING STATE organism=HOMO SAPIENS DNA sequence DC(Y12):DG(X82) DC(Y13):DG(X81) DG(Y14):DC(X80) DT(Y15):DA(X79) DA(Y16):DT(X78) DG(Y17):DC(X77) DG(Y18):DC(X76) DC(Y19):DG(X75) DA(Y20):DT(X74) DC(Y21):DG(X73) DG(Y22):DC(X72) DT(Y23):DA(X71) DC(Y24):DG(X70) DT(Y25):DA(X69) DG(Y26):DC(X68) DC(Y27):DG(X67) DT(Y28):DA(X66) DC(Y29):DG(X65) DG(Y30):DC(X64) DG(Y31):DC(X63) DC(Y32):DG(X62) DT(Y33):DA(X61) DG(Y35):DC(X59) DA(Y36):DT(X58) DG(Y37):DC(X57) DT(Y38):DA(X56) DG(Y39):DC(X55) DT(Y40):DA(X54) DT(Y41):DA(X53) DC(Y42):DG(X52) DG(Y43):DC(X51) DA(Y44):DT(X50) DT(Y45):DT(X49) DC(Y46):DT(X48) DG(Y47):DT(X47) DC(Y48):DT(X46) DG(Y49):DT(X45) DA(Y50):DT(X44) DC(Y51):DT(X43) DT(Y52):DT(X42) DG(Y53):DT(X41) DA(Y54):DT(X40) DG(Y55):DT(X39) DG(Y56):DT(X38) DA(Y57):DT(X37) DC(Y58):DT(X36) DG(Y59):DT(X35) DA(Y60):DT(X34) DA(Y61):DT(X33) DC(Y62):DT(X32) DG(Y63):DT(X31) DC(Y64):DG(X30) DG(Y65):DC(X29) DC(Y66):DG(X28) DC(Y67):DG(X27) DC(Y68):DG(X26) DC(Y69):DG(X25) DC(Y70):DG(X24) DA(Y71):DT(X23) DC(Y72):DG(X22) DC(Y73):DG(X21) DC(Y74):DG(X20) DC(Y75):DG(X19) DC(Y76):DG(X18) DT(Y77):DA(X17) DT(Y78):DA(X16) DC(Y79):DA(X15) DT(Y80):DA(X14) DA(Y81):DT(X13) DT(Y82):DA(X12) DA(Y83):DT(X11) DG(Y84):DC(X10) DG(Y85):DC(X9) DC(Y86):DG(X8) DG(Y87):DC(X7) DC(Y88):DG(X6) DC(Y89):DG(X5) DC(Y90):DG(X4) DT(Y91):DA(X3) DT(Y92):DA(X2) DC(Y93):DG(X1) chainB (227) TRP236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) TYR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) LYS334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) TYR338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) LYS413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) LYS458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (480) ILE489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (485) LYS494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1071) ARG1080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ydedddeitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiWvsmlarggqgakksaigqrivatlpYikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkeKrikYakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllKevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkKahQaragvsqvlnrltfastlshlrrlnspIgrdgKlakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedelestnrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsRdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv >5iy9_ABEMNPTV:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN HOLO-PIC IN THE INITIAL TRANSCRIBING STATE (NO IIS) organism=HOMO SAPIENS DNA sequence DT(Y11):DA(X83) DC(Y12):DG(X82) DC(Y13):DG(X81) DG(Y14):DC(X80) DT(Y15):DA(X79) DA(Y16):DT(X78) DG(Y17):DC(X77) DG(Y18):DC(X76) DC(Y19):DG(X75) DA(Y20):DT(X74) DC(Y21):DG(X73) DG(Y22):DC(X72) DT(Y23):DA(X71) DC(Y24):DG(X70) DT(Y25):DA(X69) DG(Y26):DC(X68) DC(Y27):DG(X67) DT(Y28):DA(X66) DC(Y29):DG(X65) DG(Y30):DC(X64) DG(Y31):DC(X63) DC(Y32):DG(X62) DT(Y33):DA(X61) DC(Y34):DG(X60) DG(Y35):DC(X59) DA(Y36):DT(X58) DG(Y37):DC(X57) DT(Y38):DA(X56) DG(Y39):DC(X55) DT(Y40):DA(X54) DT(Y41):DA(X53) DC(Y42):DG(X52) DG(Y43):DC(X51) DA(Y44):DT(X50) DT(Y45):DT(X49) DC(Y46):DT(X48) DG(Y47):DT(X47) DC(Y48):DT(X46) DG(Y49):DT(X45) DA(Y50):DT(X44) DC(Y51):DT(X43) DT(Y52):DT(X42) DG(Y53):DT(X41) DA(Y54):DT(X40) DG(Y55):DT(X39) DG(Y56):DT(X38) DA(Y57):DT(X37) DC(Y58):DT(X36) DG(Y59):DT(X35) DA(Y60):DT(X34) DA(Y61):DT(X33) DC(Y62):DT(X32) DG(Y63):DT(X31) DC(Y64):DG(X30) DG(Y65):DC(X29) DC(Y66):DG(X28) DC(Y67):DG(X27) DC(Y68):DG(X26) DC(Y69):DG(X25) DC(Y70):DG(X24) DA(Y71):DT(X23) DC(Y72):DG(X22) DC(Y73):DG(X21) DC(Y74):DG(X20) DC(Y75):DG(X19) DC(Y76):DG(X18) DT(Y77):DA(X17) DT(Y78):DA(X16) DC(Y79):DA(X15) DT(Y80):DA(X14) DA(Y81):DT(X13) DT(Y82):DA(X12) DA(Y83):DT(X11) DG(Y84):DC(X10) DG(Y85):DC(X9) DC(Y86):DG(X8) DG(Y87):DC(X7) DC(Y88):DG(X6) DC(Y89):DG(X5) DC(Y90):DG(X4) DT(Y91):DA(X3) DT(Y92):DA(X2) DC(Y93):DG(X1) chainA (240) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (823) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (824) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1385) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1386) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (202) LYS211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) TYR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) ARG416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) LYS458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (480) ILE489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (485) LYS494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (509) HIS518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (806) LYS815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainM ( 47) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) PHE55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ALA60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) THR106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) SER109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ARG112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ASN116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) LYS119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainP ( 15) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 2 0 0 0 0 0 0 0 0 0 0 (137) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (151) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (153) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (159) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) ILE228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainV (170) LEU413 0 0 0 0 0 0 0 0 0 0 3 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggghggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsaRnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/ydedddeitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakKdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpYikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevRiyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkKahQaragvsqvlnrltfastlshlrrlnspIgrdgKlakprqlhntlwgmvcpaetpegHavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsyKeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedelestnrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/mddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqsgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagRyityrlvq/ldalprvtcpnhpdailvedyragdmicpecglvvgdrvidvgsewRtFsNdkATkdpsrvgdsqNpllsdgdlstmigkgtgaasfdefgnskyqnrrTmsSsdRammNafKeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqvEeEpLnsEDdvsdeegqelFdtenvvvcqydkihrsknkwkfhlkdgimnlngRdyIfsKaigDaeW/tpasessgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVctgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgIHkntwelkpe/ipmdlfdfyeqmdkdeeeeeetqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmLghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvla >5iy9_P:TATA-box_binding_protein-like; title=HUMAN HOLO-PIC IN THE INITIAL TRANSCRIBING STATE (NO IIS) organism=? DNA sequence DT(Y11):DA(X83) DC(Y12):DG(X82) DC(Y13):DG(X81) DG(Y14):DC(X80) DT(Y15):DA(X79) DA(Y16):DT(X78) DG(Y17):DC(X77) DG(Y18):DC(X76) DC(Y19):DG(X75) DA(Y20):DT(X74) DC(Y21):DG(X73) DG(Y22):DC(X72) DT(Y23):DA(X71) DC(Y24):DG(X70) DT(Y25):DA(X69) DG(Y26):DC(X68) DC(Y27):DG(X67) DT(Y28):DA(X66) DC(Y29):DG(X65) DG(Y30):DC(X64) DG(Y31):DC(X63) DC(Y32):DG(X62) DT(Y33):DA(X61) DC(Y34):DG(X60) DG(Y35):DC(X59) DA(Y36):DT(X58) DG(Y37):DC(X57) DT(Y38):DA(X56) DG(Y39):DC(X55) DT(Y40):DA(X54) DT(Y41):DA(X53) DC(Y42):DG(X52) DG(Y43):DC(X51) DA(Y44):DT(X50) DT(Y45):DT(X49) DC(Y46):DT(X48) DG(Y47):DT(X47) DC(Y48):DT(X46) DG(Y49):DT(X45) DA(Y50):DT(X44) DC(Y51):DT(X43) DT(Y52):DT(X42) DG(Y53):DT(X41) DA(Y54):DT(X40) DG(Y55):DT(X39) DG(Y56):DT(X38) DA(Y57):DT(X37) DC(Y58):DT(X36) DG(Y59):DT(X35) DA(Y60):DT(X34) DA(Y61):DT(X33) DC(Y62):DT(X32) DG(Y63):DT(X31) DC(Y64):DG(X30) DG(Y65):DC(X29) DC(Y66):DG(X28) DC(Y67):DG(X27) DC(Y68):DG(X26) DC(Y69):DG(X25) DC(Y70):DG(X24) DA(Y71):DT(X23) DC(Y72):DG(X22) DC(Y73):DG(X21) DC(Y74):DG(X20) DC(Y75):DG(X19) DC(Y76):DG(X18) DT(Y77):DA(X17) DT(Y78):DA(X16) DC(Y79):DA(X15) DT(Y80):DA(X14) DA(Y81):DT(X13) DT(Y82):DA(X12) DA(Y83):DT(X11) DG(Y84):DC(X10) DG(Y85):DC(X9) DC(Y86):DG(X8) DG(Y87):DC(X7) DC(Y88):DG(X6) DC(Y89):DG(X5) DC(Y90):DG(X4) DT(Y91):DA(X3) DT(Y92):DA(X2) DC(Y93):DG(X1) chainP ( 15) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 2 0 0 0 0 0 0 0 0 0 0 (137) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (151) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (153) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (159) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpasessgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVctgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk >5iya_AMPT:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=HUMAN CORE-PIC IN THE CLOSED STATE organism=HOMO SAPIENS DNA sequence DG(X1):DC(Y93) DA(X2):DT(Y92) DA(X3):DT(Y91) DG(X4):DC(Y90) DG(X5):DC(Y89) DG(X6):DC(Y88) DC(X7):DG(Y87) DG(X8):DC(Y86) DC(X9):DG(Y85) DC(X10):DG(Y84) DT(X11):DA(Y83) DA(X12):DT(Y82) DT(X13):DA(Y81) DA(X14):DT(Y80) DA(X15):DT(Y79) DA(X16):DT(Y78) DA(X17):DT(Y77) DG(X18):DC(Y76) DG(X19):DC(Y75) DG(X20):DC(Y74) DG(X21):DC(Y73) DG(X22):DC(Y72) DT(X23):DA(Y71) DG(X24):DC(Y70) DG(X25):DC(Y69) DG(X26):DC(Y68) DG(X27):DC(Y67) DG(X28):DC(Y66) DC(X29):DG(Y65) DG(X30):DC(Y64) DC(X31):DG(Y63) DG(X32):DC(Y62) DT(X33):DA(Y61) DT(X34):DA(Y60) DC(X35):DG(Y59) DG(X36):DC(Y58) DT(X37):DA(Y57) DC(X38):DG(Y56) DC(X39):DG(Y55) DT(X40):DA(Y54) DC(X41):DG(Y53) DA(X42):DT(Y52) DG(X43):DC(Y51) DT(X44):DA(Y50) DC(X45):DG(Y49) DG(X46):DC(Y48) DC(X47):DG(Y47) DG(X48):DC(Y46) DA(X49):DT(Y45) DT(X50):DA(Y44) DC(X51):DG(Y43) DG(X52):DC(Y42) DA(X53):DT(Y41) DA(X54):DT(Y40) DC(X55):DG(Y39) DA(X56):DT(Y38) DC(X57):DG(Y37) DT(X58):DA(Y36) DC(X59):DG(Y35) chainA chainM (230) ARG286 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 15) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PHE288 0 0 0 0 0 0 0 0 0 0 6 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) PRO289 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) PHE305 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 15 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggghggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitrhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/ldalprvtcpnhpdailvedyragdmicpecglvvgdrvidvgsewrtrtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtiRqsyrliyprapdlfptdfkfdtpvdklpql/tpasessgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmvcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgiHkntwelkpe >5iya_T:Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=HUMAN CORE-PIC IN THE CLOSED STATE organism=HOMO SAPIENS DNA sequence DG(Y35):DC(X59) DA(Y36):DT(X58) DG(Y37):DC(X57) DT(Y38):DA(X56) DG(Y39):DC(X55) DT(Y40):DA(X54) DT(Y41):DA(X53) DC(Y42):DG(X52) DG(Y43):DC(X51) DA(Y44):DT(X50) DT(Y45):DA(X49) DC(Y46):DG(X48) DG(Y47):DC(X47) DC(Y48):DG(X46) DG(Y49):DC(X45) DA(Y50):DT(X44) DC(Y51):DG(X43) DT(Y52):DA(X42) DG(Y53):DC(X41) DA(Y54):DT(X40) DG(Y55):DC(X39) DG(Y56):DC(X38) DA(Y57):DT(X37) DC(Y58):DG(X36) DG(Y59):DC(X35) DA(Y60):DT(X34) DA(Y61):DT(X33) DC(Y62):DG(X32) DG(Y63):DC(X31) DC(Y64):DG(X30) DG(Y65):DC(X29) DC(Y66):DG(X28) DC(Y67):DG(X27) DC(Y68):DG(X26) DC(Y69):DG(X25) DC(Y70):DG(X24) DA(Y71):DT(X23) DC(Y72):DG(X22) DC(Y73):DG(X21) DC(Y74):DG(X20) DC(Y75):DG(X19) DC(Y76):DG(X18) DT(Y77):DA(X17) DT(Y78):DA(X16) DT(Y79):DA(X15) DT(Y80):DA(X14) DA(Y81):DT(X13) DT(Y82):DA(X12) DA(Y83):DT(X11) DG(Y84):DC(X10) DG(Y85):DC(X9) DC(Y86):DG(X8) DG(Y87):DC(X7) DC(Y88):DG(X6) DC(Y89):DG(X5) DC(Y90):DG(X4) DT(Y91):DA(X3) DT(Y92):DA(X2) DC(Y93):DG(X1) chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 15 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgiHkntwelkpe >5iyb_ABEMNPT:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=HUMAN CORE-PIC IN THE OPEN STATE organism=HOMO SAPIENS DNA sequence DC(Y19):DG(X74) DA(Y20):DT(X73) DC(Y21):DG(X72) DG(Y22):DC(X71) DT(Y23):DA(X70) DC(Y24):DG(X69) DT(Y25):DA(X68) DG(Y26):DC(X67) DC(Y27):DG(X66) DT(Y28):DA(X65) DC(Y29):DG(X64) DG(Y30):DC(X63) DG(Y31):DC(X62) DC(Y32):DG(X61) DT(Y33):DA(X60) DC(Y34):DG(X59) DG(Y35):DC(X58) DA(Y36):DT(X57) DG(Y37):DC(X56) DT(Y38):DA(X55) DG(Y39):DC(X54) DT(Y40):DA(X53) DT(Y41):DA(X52) DC(Y42):DG(X51) DG(Y43):DC(X50) DA(Y44):DT(X49) DT(Y45):DA(X48) DC(Y46):DG(X47) DG(Y47):DC(X46) DC(Y48):DG(X45) DG(Y49):DC(X44) DA(Y50):DT(X43) DC(Y51):DT(X42) DT(Y52):DT(X41) DG(Y53):DT(X40) DA(Y54):DT(X39) DG(Y55):DT(X38) DG(Y56):DT(X37) DA(Y57):DT(X36) DC(Y58):DT(X35) DG(Y59):DT(X34) DA(Y60):DA(X33) DA(Y61):DA(X32) DC(Y62):DG(X31) DG(Y63):DC(X30) DC(Y64):DG(X29) DG(Y65):DC(X28) DC(Y66):DG(X27) DC(Y67):DG(X26) DC(Y68):DG(X25) DC(Y69):DG(X24) DC(Y70):DG(X23) DA(Y71):DT(X22) DC(Y72):DG(X21) DC(Y73):DG(X20) DC(Y74):DG(X19) DC(Y75):DG(X18) DC(Y76):DG(X17) DT(Y77):DA(X16) DT(Y78):DA(X15) DT(Y79):DA(X14) DT(Y80):DA(X13) DA(Y81):DT(X12) DT(Y82):DA(X11) DA(Y83):DT(X10) DG(Y84):DC(X9) DG(Y85):DC(X8) DC(Y86):DG(X7) DG(Y87):DC(X6) DC(Y88):DG(X5) DC(Y89):DG(X4) DC(Y90):DG(X3) DT(Y91):DA(X2) DT(Y92):DA(X1) DC(Y93):DG(X0) chainA (300) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) LYS346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1385) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (253) TYR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) LYS458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (483) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (509) HIS518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainM ( 50) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ASP58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) LYS59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ALA60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASP69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) GLN71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ASN98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) SER99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) LYS100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) THR106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) MET107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ARG112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) MET115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainP ( 15) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 (137) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 (151) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 (153) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (159) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 (161) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggghggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgKegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/ydedddeitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpYikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkKahqaragvsqvlnrltfastlshlrrlnspigrDgklakprqlhntlwgmvcpaetpegHavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedelestnrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/mddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqsgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq/ldalprvtcpnhpdailvedyragdmicpecglvvgdrvidvgsewrtfSNDKATkdpsRvgDSQnpllsdgdlstmigKgtgaasfdefgNSKyqNRrTMsssdRamMnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqveeePLNSEDdvsdEegQELfdtenvvvcqydkiHrsknkwkfhlkDGImnLNgRDyifsKaiGdaew/tpasessgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgiHkntwelkpe >5iyb_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=HUMAN CORE-PIC IN THE OPEN STATE organism=HOMO SAPIENS DNA sequence DC(Y19):DG(X74) DA(Y20):DT(X73) DC(Y21):DG(X72) DG(Y22):DC(X71) DT(Y23):DA(X70) DC(Y24):DG(X69) DT(Y25):DA(X68) DG(Y26):DC(X67) DC(Y27):DG(X66) DT(Y28):DA(X65) DC(Y29):DG(X64) DG(Y30):DC(X63) DG(Y31):DC(X62) DC(Y32):DG(X61) DT(Y33):DA(X60) DC(Y34):DG(X59) DG(Y35):DC(X58) DA(Y36):DT(X57) DG(Y37):DC(X56) DT(Y38):DA(X55) DG(Y39):DC(X54) DT(Y40):DA(X53) DT(Y41):DA(X52) DC(Y42):DG(X51) DG(Y43):DC(X50) DA(Y44):DT(X49) DT(Y45):DA(X48) DC(Y46):DG(X47) DG(Y47):DC(X46) DC(Y48):DG(X45) DG(Y49):DC(X44) DA(Y50):DT(X43) DC(Y51):DT(X42) DT(Y52):DT(X41) DG(Y53):DT(X40) DA(Y54):DT(X39) DG(Y55):DT(X38) DG(Y56):DT(X37) DA(Y57):DT(X36) DC(Y58):DT(X35) DG(Y59):DT(X34) DA(Y60):DA(X33) DA(Y61):DA(X32) DC(Y62):DG(X31) DG(Y63):DC(X30) DC(Y64):DG(X29) DG(Y65):DC(X28) DC(Y66):DG(X27) DC(Y67):DG(X26) DC(Y68):DG(X25) DC(Y69):DG(X24) DC(Y70):DG(X23) DA(Y71):DT(X22) DC(Y72):DG(X21) DC(Y73):DG(X20) DC(Y74):DG(X19) DC(Y75):DG(X18) DC(Y76):DG(X17) DT(Y77):DA(X16) DT(Y78):DA(X15) DT(Y79):DA(X14) DT(Y80):DA(X13) DA(Y81):DT(X12) DT(Y82):DA(X11) DA(Y83):DT(X10) DG(Y84):DC(X9) DG(Y85):DC(X8) DC(Y86):DG(X7) DG(Y87):DC(X6) DC(Y88):DG(X5) DC(Y89):DG(X4) DC(Y90):DG(X3) DT(Y91):DA(X2) DT(Y92):DA(X1) DC(Y93):DG(X0) chainB (253) TYR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) LYS458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (483) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (509) HIS518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ydedddeitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpYikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkKahqaragvsqvlnrltfastlshlrrlnspigrDgklakprqlhntlwgmvcpaetpegHavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedelestnrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv >5iyc_ABEMNPT:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=HUMAN CORE-PIC IN THE INITIAL TRANSCRIBING STATE organism=HOMO SAPIENS DNA sequence DG(X1):DC(Y93) DA(X2):DT(Y92) DA(X3):DT(Y91) DG(X4):DC(Y90) DG(X5):DC(Y89) DG(X6):DC(Y88) DC(X7):DG(Y87) DG(X8):DC(Y86) DC(X9):DG(Y85) DC(X10):DG(Y84) DT(X11):DA(Y83) DA(X12):DT(Y82) DT(X13):DA(Y81) DA(X14):DT(Y80) DA(X15):DT(Y79) DA(X16):DT(Y78) DA(X17):DT(Y77) DG(X18):DC(Y76) DG(X19):DC(Y75) DG(X20):DC(Y74) DG(X21):DC(Y73) DG(X22):DC(Y72) DT(X23):DA(Y71) DG(X24):DC(Y70) DG(X25):DC(Y69) DG(X26):DC(Y68) DG(X27):DC(Y67) DG(X28):DC(Y66) DC(X29):DG(Y65) DG(X30):DC(Y64) DT(X31):DG(Y63) DT(X32):DC(Y62) DT(X33):DA(Y61) DT(X34):DA(Y60) DT(X35):DG(Y59) DT(X36):DC(Y58) DT(X37):DA(Y57) DT(X38):DG(Y56) DT(X39):DG(Y55) DT(X40):DA(Y54) DT(X41):DG(Y53) DT(X42):DT(Y52) DT(X43):DC(Y51) DT(X44):DA(Y50) DT(X45):DG(Y49) DT(X46):DC(Y48) DT(X47):DG(Y47) DT(X48):DC(Y46) DT(X49):DT(Y45) DT(X50):DA(Y44) DC(X51):DG(Y43) DG(X52):DC(Y42) DA(X53):DT(Y41) DA(X54):DT(Y40) DC(X55):DG(Y39) DA(X56):DT(Y38) DC(X57):DG(Y37) DT(X58):DA(Y36) DC(X59):DG(Y35) DG(X60):DC(Y34) DA(X61):DT(Y33) DG(X62):DC(Y32) DC(X63):DG(Y31) DC(X64):DG(Y30) DG(X65):DC(Y29) DA(X66):DT(Y28) DG(X67):DC(Y27) DC(X68):DG(Y26) DA(X69):DT(Y25) DG(X70):DC(Y24) DA(X71):DT(Y23) DC(X72):DG(Y22) DG(X73):DC(Y21) DT(X74):DA(Y20) DG(X75):DC(Y19) DC(X76):DG(Y18) DC(X77):DG(Y17) DT(X78):DA(Y16) DA(X79):DT(Y15) DC(X80):DG(Y14) chainA (235) MET266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (823) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1385) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (227) TRP236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) TYR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) LYS334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) TYR338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) LYS413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) LYS458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (480) ILE489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (485) LYS494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1071) ARG1080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainM ( 47) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) PHE55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ALA60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) THR106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ARG112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ASN116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) LYS119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainP ( 15) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PHE288 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) PRO289 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) LEU303 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) PHE305 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) VAL311 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR313 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) ILE228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggghggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/ydedddeitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiWvsmlarggqgakksaigqrivatlpYikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkeKrikYakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllKevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkKahQaragvsqvlnrltfastlshlrrlnspIgrdgKlakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedelestnrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsRdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/mddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqsgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq/ldalprvtcpnhpdailvedyragdmicpecglvvgdrvidvgsewRtFSNdkAtkdpsrvgdSqNpllsdgdlstmigKgtgaasfdefgnskyqNrRTmsssdRammNafKeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqvEeEPLnsEddvsdeegqElFdtenvvvcqydkiHrsknkwkfhlkdgimnLnGRdyifsKaigDaeW/tpasessgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmvgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgIHkntwelkpe >5iyc_T:Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=HUMAN CORE-PIC IN THE INITIAL TRANSCRIBING STATE organism=HOMO SAPIENS DNA sequence DG(X1):DC(Y93) DA(X2):DT(Y92) DA(X3):DT(Y91) DG(X4):DC(Y90) DG(X5):DC(Y89) DG(X6):DC(Y88) DC(X7):DG(Y87) DG(X8):DC(Y86) DC(X9):DG(Y85) DC(X10):DG(Y84) DT(X11):DA(Y83) DA(X12):DT(Y82) DT(X13):DA(Y81) DA(X14):DT(Y80) DA(X15):DT(Y79) DA(X16):DT(Y78) DA(X17):DT(Y77) DG(X18):DC(Y76) DG(X19):DC(Y75) DG(X20):DC(Y74) DG(X21):DC(Y73) DG(X22):DC(Y72) DT(X23):DA(Y71) DG(X24):DC(Y70) DG(X25):DC(Y69) DG(X26):DC(Y68) DG(X27):DC(Y67) DG(X28):DC(Y66) DC(X29):DG(Y65) DG(X30):DC(Y64) DT(X31):DG(Y63) DT(X32):DC(Y62) DT(X33):DA(Y61) DT(X34):DA(Y60) DT(X35):DG(Y59) DT(X36):DC(Y58) DT(X37):DA(Y57) DT(X38):DG(Y56) DT(X39):DG(Y55) DT(X40):DA(Y54) DT(X41):DG(Y53) DT(X42):DT(Y52) DT(X43):DC(Y51) DT(X44):DA(Y50) DT(X45):DG(Y49) DT(X46):DC(Y48) DT(X47):DG(Y47) DT(X48):DC(Y46) DT(X49):DT(Y45) DT(X50):DA(Y44) DC(X51):DG(Y43) DG(X52):DC(Y42) DA(X53):DT(Y41) DA(X54):DT(Y40) DC(X55):DG(Y39) DA(X56):DT(Y38) DC(X57):DG(Y37) DT(X58):DA(Y36) DC(X59):DG(Y35) DG(X60):DC(Y34) DA(X61):DT(Y33) DG(X62):DC(Y32) DC(X63):DG(Y31) DC(X64):DG(Y30) DG(X65):DC(Y29) DA(X66):DT(Y28) DG(X67):DC(Y27) DC(X68):DG(Y26) DA(X69):DT(Y25) DG(X70):DC(Y24) DA(X71):DT(Y23) DC(X72):DG(Y22) DG(X73):DC(Y21) DT(X74):DA(Y20) DG(X75):DC(Y19) DC(X76):DG(Y18) DC(X77):DG(Y17) DT(X78):DA(Y16) DA(X79):DT(Y15) DC(X80):DG(Y14) chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) ILE228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgIHkntwelkpe >5iyd_ABEMNPT:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=HUMAN CORE-PIC IN THE INITIAL TRANSCRIBING STATE (NO IIS) organism=HOMO SAPIENS DNA sequence DG(X1):DC(Y93) DA(X2):DT(Y92) DA(X3):DT(Y91) DG(X4):DC(Y90) DG(X5):DC(Y89) DG(X6):DC(Y88) DC(X7):DG(Y87) DG(X8):DC(Y86) DC(X9):DG(Y85) DC(X10):DG(Y84) DT(X11):DA(Y83) DA(X12):DT(Y82) DT(X13):DA(Y81) DA(X14):DT(Y80) DA(X15):DT(Y79) DA(X16):DT(Y78) DA(X17):DT(Y77) DG(X18):DC(Y76) DG(X19):DC(Y75) DG(X20):DC(Y74) DG(X21):DC(Y73) DG(X22):DC(Y72) DT(X23):DA(Y71) DG(X24):DC(Y70) DG(X25):DC(Y69) DG(X26):DC(Y68) DG(X27):DC(Y67) DG(X28):DC(Y66) DC(X29):DG(Y65) DG(X30):DC(Y64) DT(X31):DG(Y63) DT(X32):DC(Y62) DT(X33):DA(Y61) DT(X34):DA(Y60) DT(X35):DG(Y59) DT(X36):DC(Y58) DT(X37):DA(Y57) DT(X38):DG(Y56) DT(X39):DG(Y55) DT(X40):DA(Y54) DT(X41):DG(Y53) DT(X42):DT(Y52) DT(X43):DC(Y51) DT(X44):DA(Y50) DT(X45):DG(Y49) DT(X46):DC(Y48) DT(X47):DG(Y47) DT(X48):DC(Y46) DT(X49):DT(Y45) DT(X50):DA(Y44) DC(X51):DG(Y43) DG(X52):DC(Y42) DA(X53):DT(Y41) DA(X54):DT(Y40) DC(X55):DG(Y39) DA(X56):DT(Y38) DC(X57):DG(Y37) DT(X58):DA(Y36) DC(X59):DG(Y35) DG(X60):DC(Y34) DA(X61):DT(Y33) DG(X62):DC(Y32) DC(X63):DG(Y31) DC(X64):DG(Y30) DG(X65):DC(Y29) DA(X66):DT(Y28) DG(X67):DC(Y27) DC(X68):DG(Y26) DA(X69):DT(Y25) DG(X70):DC(Y24) DA(X71):DT(Y23) DC(X72):DG(Y22) DG(X73):DC(Y21) DT(X74):DA(Y20) DG(X75):DC(Y19) DC(X76):DG(Y18) DC(X77):DG(Y17) DT(X78):DA(Y16) DA(X79):DT(Y15) DC(X80):DG(Y14) chainA (240) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (823) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (824) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1385) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1386) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (202) LYS211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) TYR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) ARG416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) LYS458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (480) ILE489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (485) LYS494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (509) HIS518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (806) LYS815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainM ( 47) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) PHE55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ALA60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) THR106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) SER109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ARG112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ASN116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) LYS119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainP ( 15) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PHE288 0 0 0 0 0 0 0 0 0 0 2 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) PRO289 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) LEU303 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) PHE305 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR313 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) ILE228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggghggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsaRnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/ydedddeitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakKdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpYikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevRiyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkKahQaragvsqvlnrltfastlshlrrlnspIgrdgKlakprqlhntlwgmvcpaetpegHavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsyKeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedelestnrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/mddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqsgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagRyityrlvq/ldalprvtcpnhpdailvedyragdmicpecglvvgdrvidvgsewRtFsNdkATkdpsrvgdsqNpllsdgdlstmigkgtgaasfdefgnskyqnrrTmsSsdRammNafKeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqvEeEpLnsEDdvsdeegqelFdtenvvvcqydkihrsknkwkfhlkdgimnlngRdyIfsKaigDaeW/tpasessgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVctgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgIHkntwelkpe >5iyd_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=HUMAN CORE-PIC IN THE INITIAL TRANSCRIBING STATE (NO IIS) organism=HOMO SAPIENS DNA sequence DG(Y14):DC(X80) DT(Y15):DA(X79) DA(Y16):DT(X78) DG(Y17):DC(X77) DG(Y18):DC(X76) DC(Y19):DG(X75) DA(Y20):DT(X74) DC(Y21):DG(X73) DG(Y22):DC(X72) DT(Y23):DA(X71) DC(Y24):DG(X70) DT(Y25):DA(X69) DG(Y26):DC(X68) DC(Y27):DG(X67) DT(Y28):DA(X66) DC(Y29):DG(X65) DG(Y30):DC(X64) DG(Y31):DC(X63) DC(Y32):DG(X62) DT(Y33):DA(X61) DC(Y34):DG(X60) DG(Y35):DC(X59) DA(Y36):DT(X58) DG(Y37):DC(X57) DT(Y38):DA(X56) DG(Y39):DC(X55) DT(Y40):DA(X54) DT(Y41):DA(X53) DC(Y42):DG(X52) DG(Y43):DC(X51) DA(Y44):DT(X50) DT(Y45):DT(X49) DC(Y46):DT(X48) DG(Y47):DT(X47) DC(Y48):DT(X46) DG(Y49):DT(X45) DA(Y50):DT(X44) DC(Y51):DT(X43) DT(Y52):DT(X42) DG(Y53):DT(X41) DA(Y54):DT(X40) DG(Y55):DT(X39) DG(Y56):DT(X38) DA(Y57):DT(X37) DC(Y58):DT(X36) DG(Y59):DT(X35) DA(Y60):DT(X34) DA(Y61):DT(X33) DC(Y62):DT(X32) DG(Y63):DT(X31) DC(Y64):DG(X30) DG(Y65):DC(X29) DC(Y66):DG(X28) DC(Y67):DG(X27) DC(Y68):DG(X26) DC(Y69):DG(X25) DC(Y70):DG(X24) DA(Y71):DT(X23) DC(Y72):DG(X22) DC(Y73):DG(X21) DC(Y74):DG(X20) DC(Y75):DG(X19) DC(Y76):DG(X18) DT(Y77):DA(X17) DT(Y78):DA(X16) DT(Y79):DA(X15) DT(Y80):DA(X14) DA(Y81):DT(X13) DT(Y82):DA(X12) DA(Y83):DT(X11) DG(Y84):DC(X10) DG(Y85):DC(X9) DC(Y86):DG(X8) DG(Y87):DC(X7) DC(Y88):DG(X6) DC(Y89):DG(X5) DC(Y90):DG(X4) DT(Y91):DA(X3) DT(Y92):DA(X2) DC(Y93):DG(X1) chainB (202) LYS211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) TYR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) ARG416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) LYS458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (480) ILE489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (485) LYS494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (509) HIS518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (806) LYS815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ydedddeitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakKdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpYikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevRiyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkKahQaragvsqvlnrltfastlshlrrlnspIgrdgKlakprqlhntlwgmvcpaetpegHavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsyKeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedelestnrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv >5j0n_EKLMNO:DNA_breaking-rejoining_enzymes;DNA-binding_domain; title=LAMBDA EXCISION HJ INTERMEDIATE organism=ENTEROBACTERIA PHAGE LAMBDA / ESCHERICHIA COLI DNA sequence DG(A-117):DC(B117) DT(A-116):DA(B116) DC(A-115):DG(B115) DG(A-114):DC(B114) DG(A-113):DC(B113) DC(A-112):DG(B112) DA(A-111):DT(B111) DT(A-110):DA(B110) DA(A-109):DT(B109) DG(A-108):DC(B108) DT(A-107):DA(B107) DG(A-106):DC(B106) DA(A-105):DT(B105) DC(A-104):DG(B104) DT(A-103):DA(B103) DG(A-102):DC(B102) DC(A-101):DG(B101) DA(A-100):DT(B100) DT(A-99):DA(B99) DA(A-98):DT(B98) DT(A-97):DA(B97) DG(A-96):DC(B96) DT(A-95):DA(B95) DT(A-94):DA(B94) DG(A-93):DC(B93) DT(A-92):DA(B92) DG(A-91):DC(B91) DT(A-90):DA(B90) DT(A-89):DA(B89) DT(A-88):DA(B88) DT(A-87):DA(B87) DA(A-86):DT(B86) DC(A-85):DG(B85) DA(A-84):DT(B84) DG(A-83):DC(B83) DT(A-82):DA(B82) DA(A-81):DT(B81) DT(A-80):DA(B80) DT(A-79):DA(B79) DA(A-78):DT(B78) DT(A-77):DA(B77) DG(A-76):DC(B76) DT(A-75):DA(B75) DA(A-74):DT(B74) DG(A-73):DC(B73) DT(A-72):DA(B72) DC(A-71):DG(B71) DT(A-70):DA(B70) DG(A-69):DC(B69) DT(A-68):DA(B68) DT(A-67):DA(B67) DT(A-66):DA(B66) DT(A-65):DA(B65) DT(A-64):DA(B64) DT(A-63):DA(B63) DT(A-61):DA(B61) DG(A-60):DC(B60) DC(A-59):DG(B59) DA(A-58):DT(B58) DA(A-57):DT(B57) DA(A-56):DT(B56) DA(A-55):DT(B55) DT(A-54):DA(B54) DC(A-53):DG(B53) DT(A-52):DA(B52) DA(A-51):DT(B51) DA(A-50):DT(B50) DT(A-49):DA(B49) DT(A-48):DA(B48) DT(A-47):DA(B47) DA(A-46):DT(B46) DA(A-45):DT(B45) DT(A-44):DA(B44) DA(A-43):DT(B43) DT(A-42):DA(B42) DA(A-41):DT(B41) DT(A-40):DA(B40) DT(A-39):DA(B39) DG(A-38):DC(B38) DA(A-37):DT(B37) DT(A-36):DA(B36) DA(A-35):DT(B35) DT(A-34):DA(B34) DT(A-33):DA(B33) DT(A-32):DA(B32) DA(A-31):DT(B31) DT(A-30):DA(B30) DA(A-29):DT(B29) DT(A-28):DA(B28) DC(A-27):DG(B27) DA(A-26):DT(B26) DT(A-25):DA(B25) DT(A-24):DA(B24) DT(A-23):DA(B23) DT(A-22):DA(B22) DA(A-21):DT(B21) DC(A-20):DG(B20) DG(A-19):DC(B19) DT(A-18):DA(B18) DT(A-17):DA(B17) DT(A-16):DA(B16) DC(A-15):DG(B15) DT(A-14):DA(B14) DC(A-13):DG(B13) DG(A-12):DC(B12) DT(A-11):DA(B11) DT(A-10):DA(B10) DC(A-9):DG(B9) DA(A-8):DT(B8) DG(A-7):DC(B7) DC(A-6):DG(B6) DT(A-5):DA(B5) DT(A-4):DA(B4) DT(A-3):DA(B3) DA(A-2):DT(B2) DA(A-1):DT(B1) DT(A0):DA(B0) DA(A1):DT(B-1) chainE ( 24) LYS95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 25) THR96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 ( 28) ASN99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 ( 29) TYR100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 31) SER102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 32) LYS103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 ( 67) ALA138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 68) SER139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 70) LYS141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 71) LEU142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 74) SER145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (106) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (164) LYS235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (213) THR284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (216) ARG287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 3 0 0 0 0 0 0 0 0 0 chainK ( 59) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 46) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 19) GLU19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 19) GLU19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 17) SER17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) GLU19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvtlhswldryekilasrgikqKTliNYmSKikairrglpdapledittkeiaamlngyidegkaASaKLirStlsdafreaiaeghittnhvaatraaksevrRsrltadeylkiyqaaesspcwlrlamelavvtgqrvgdlcemkwsdivdgylyveqsKtgvkiaiptalhidalgismketldkckeilggetiiastrreplssgTvsRyfmrarkasglsfegdpptfhelrslsarlyekqisdkfaqhllghksdtewdkieik/altkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenaspk/mtkselierlatqqshipaktvedavkemlehmastlaqgerieiRgfgsfslhyrapRtgRNPKtgdkvelegkyvphfkpgkelrdraniyg/myltlqewnarqrrprslEtvRRwvresrifpppvkdgReylfhesavkvdln/myltlqewnarqrrprslEtvRrwvresrifpppvkdgreylfhesavkvdlnr/myltlqewnarqrrprSlEtvrrwvresrifpppvkdgreylfhesavkvdlnrp >5j0n_F:DNA_breaking-rejoining_enzymes;DNA-binding_domain; title=LAMBDA EXCISION HJ INTERMEDIATE organism=ENTEROBACTERIA PHAGE LAMBDA DNA sequence DA(D-79):DT(A79) DT(D-78):DA(A78) DC(D-77):DG(A77) DA(D-76):DT(A76) DA(D-75):DT(A75) DT(D-74):DA(A74) DA(D-73):DT(A73) DT(D-72):DA(A72) DT(D-71):DA(A71) DT(D-70):DA(A70) DT(D-69):DA(A69) DG(D-68):DC(A68) DC(D-66):DG(A66) DT(D-65):DA(A65) DG(D-64):DC(A64) DA(D-63):DT(A63) DT(D-62):DA(A62) DA(D-61):DT(A61) DG(D-60):DC(A60) DT(D-59):DA(A59) DG(D-58):DC(A58) DC(D-56):DG(A56) DC(D-55):DG(A55) DT(D-54):DA(A54) DG(D-53):DC(A53) DT(D-52):DA(A52) DT(D-51):DA(A51) DC(D-50):DG(A50) DG(D-49):DC(A49) DT(D-48):DA(A48) DT(D-47):DA(A47) DG(D-46):DC(A46) DC(D-45):DG(A45) DA(D-44):DT(A44) DA(D-43):DT(A43) DC(D-42):DG(A42) DA(D-41):DT(A41) DA(D-40):DT(A40) DA(D-39):DT(A39) DT(D-38):DA(A38) DT(D-37):DA(A37) DG(D-36):DC(A36) DA(D-35):DT(A35) DT(D-34):DA(A34) DA(D-33):DT(A33) DA(D-32):DT(A32) DG(D-31):DC(A31) DC(D-30):DG(A30) DA(D-29):DT(A29) DA(D-28):DT(A28) DT(D-27):DA(A27) DG(D-26):DC(A26) DC(D-25):DG(A25) DT(D-24):DA(A24) DT(D-23):DA(A23) DT(D-22):DA(A22) DT(D-21):DA(A21) DT(D-20):DA(A20) DT(D-19):DA(A19) DA(D-18):DT(A18) DG(D-17):DC(A17) DA(D-16):DT(A16) DA(D-15):DT(A15) DT(D-14):DA(A14) DT(D-13):DA(A13) DC(D-12):DG(A12) DC(D-11):DG(A11) DA(D-10):DT(A10) DA(D-9):DT(A9) DC(D-8):DG(A8) DT(D-7):DA(A7) DT(D-6):DA(A6) DA(D-5):DT(A5) DT(D-4):DA(A4) DT(D-3):DA(A3) DG(D-2):DC(A2) chainF ( 1) MET1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ASN20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ASN21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 15 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) GLU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) LYS95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 ( 96) THR96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 ( 99) ASN99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 7 0 0 0 0 (100) TYR100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 (103) LYS103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (138) ALA138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (139) SER139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (142) LEU142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 1 0 0 0 (145) SER145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (235) LYS235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (284) THR284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (286) SER286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (287) ARG287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 6 0 0 0 0 0 0 0 0 (288) TYR288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (291) ARG291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (337) THR337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (338) MET338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence MgRrrsherrdlppnlYiRNNgyycyRdprtgkEfglgrdrriaiteaiqanielfsghkhkpltarinsdnsvtlhswldryekilasrgikqKTliNYmsKikairrglpdapledittkeiaamlngyidegkaASakLirStlsdafreaiaeghittnhvaatraaksevrrsrltadeylkiyqaaesspcwlrlamelavvtgqrvgdlcemkwsdivdgylyveqsKtgvkiaiptalhidalgismketldkckeilggetiiastrreplssgTvSRYfmRarkasglsfegdpptfhelrslsarlyekqisdkfaqhllghksdTMasqyrddrgrewdkieik >5j0n_FIJ:DNA_breaking-rejoining_enzymes;DNA-binding_domain; title=LAMBDA EXCISION HJ INTERMEDIATE organism=ESCHERICHIA COLI / ENTEROBACTERIA PHAGE LAMBDA DNA sequence DG(A-19):DG(D19) DT(A-18):DG(D18) DT(A-17):DC(D17) DT(A-16):DA(D16) DC(A-15):DA(D15) DT(A-14):DC(D14) DC(A-13):DT(D13) DG(A-12):DT(D12) DT(A-11):DC(D11) DT(A-10):DG(D10) DC(A-9):DG(D9) DA(A-8):DA(D8) DG(A-7):DC(D7) DC(A-6):DG(D6) DT(A-5):DA(D5) DT(A-4):DA(D4) DT(A-3):DA(D3) DA(A-2):DA(D2) DA(A-1):DA(D1) DT(A0):DA(D0) DA(A1):DT(D-1) DC(A2):DG(D-2) DA(A3):DT(D-3) DA(A4):DT(D-4) DT(A5):DA(D-5) DA(A6):DT(D-6) DA(A7):DT(D-7) DG(A8):DC(D-8) DT(A9):DA(D-9) DT(A10):DA(D-10) DG(A11):DC(D-11) DG(A12):DC(D-12) DA(A13):DT(D-13) DA(A14):DT(D-14) DT(A15):DA(D-15) DT(A16):DA(D-16) DC(A17):DG(D-17) DT(A18):DA(D-18) DA(A19):DT(D-19) DA(A20):DT(D-20) DA(A21):DT(D-21) DA(A22):DT(D-22) DA(A23):DT(D-23) DA(A24):DT(D-24) DG(A25):DC(D-25) DC(A26):DG(D-26) DA(A27):DT(D-27) DT(A28):DA(D-28) DT(A29):DA(D-29) DG(A30):DC(D-30) DC(A31):DG(D-31) DT(A32):DA(D-32) DT(A33):DA(D-33) DA(A34):DT(D-34) DT(A35):DA(D-35) DC(A36):DG(D-36) DA(A37):DT(D-37) DA(A38):DT(D-38) DT(A39):DA(D-39) DT(A40):DA(D-40) DT(A41):DA(D-41) DG(A42):DC(D-42) DT(A43):DA(D-43) DT(A44):DA(D-44) DG(A45):DC(D-45) DC(A46):DG(D-46) DA(A47):DT(D-47) DA(A48):DT(D-48) DC(A49):DG(D-49) DG(A50):DC(D-50) DA(A51):DT(D-51) DA(A52):DT(D-52) DC(A53):DG(D-53) DA(A54):DT(D-54) DG(A55):DC(D-55) DG(A56):DC(D-56) DT(A57):DA(D-57) DC(A58):DG(D-58) DA(A59):DT(D-59) DC(A60):DG(D-60) DT(A61):DA(D-61) DA(A62):DT(D-62) DT(A63):DA(D-63) DC(A64):DG(D-64) DA(A65):DT(D-65) DG(A66):DC(D-66) DT(A67):DA(D-67) DC(A68):DG(D-68) DA(A69):DT(D-69) DA(A70):DT(D-70) DA(A71):DT(D-71) DA(A72):DT(D-72) DT(A73):DA(D-73) DA(A74):DT(D-74) DT(A75):DA(D-75) DT(A76):DA(D-76) DG(A77):DC(D-77) DA(A78):DT(D-78) DT(A79):DA(D-79) chainF ( 1) MET1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ASN20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ASN21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 15 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) CYS25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) GLU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) LYS95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) THR96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) TYR100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) LYS103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) ALA138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) SER139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) LEU142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) SER145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) LYS235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) THR284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) SER286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) ARG287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TYR288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) ARG291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) THR337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) MET338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI ( 59) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 46) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence MgRrrsherrdlppnlYiRNNgyyCyRdprtgkEfglgrdrriaiteaiqanielfsghkhkpltarinsdnsvtlhswldryekilasrgikqKTliNYmsKikairrglpdapledittkeiaamlngyidegkaASakLirStlsdafreaiaeghittnhvaatraaksevrrsrltadeylkiyqaaesspcwlrlamelavvtgqrvgdlcemkwsdivdgylyveqsKtgvkiaiptalhidalgismketldkckeilggetiiastrreplssgTvSRYfmRarkasglsfegdpptfhelrslsarlyekqisdkfaqhllghksdTMasqyrddrgrewdkieik/altkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRnPKtgedipItarrvvtfrpgqklksrvenaspk/mtkselierlatqqshipaktvedavkemlehmastlaqgerieiRgfgsfslhyrapRtgRNPKtgdkvelegkyvphfkpgkelrdraniyg >5j0o_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A:A MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 38 0 0 0 0 ( 29) LYS35 8 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j0p_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A:C MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 29) HIS34 0 0 0 0 38 ( 30) LYS35 0 0 0 0 9 ( 33) ALA38 0 0 0 0 4 prot.sequence apqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j0q_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A:G MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 29) HIS34 38 0 0 0 0 ( 30) LYS35 9 0 0 0 0 ( 33) ALA38 5 0 0 0 0 prot.sequence apqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j0r_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH C:A MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 29) HIS34 0 0 0 0 36 ( 30) LYS35 0 0 0 0 9 ( 33) ALA38 0 0 0 0 4 prot.sequence apqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j0s_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH C:T MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 29) HIS34 40 0 0 0 0 ( 30) LYS35 9 0 0 0 0 ( 33) ALA38 4 0 0 0 0 prot.sequence apqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j0t_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH G:A MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 29) HIS34 0 0 0 0 36 ( 30) LYS35 0 0 0 0 8 ( 33) ALA38 0 0 0 0 5 prot.sequence apqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j0u_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH G:G MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 29) HIS34 0 0 0 0 39 ( 30) LYS35 0 0 0 0 8 ( 33) ALA38 0 0 0 0 5 prot.sequence apqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j0w_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH T:C MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 36 ( 29) LYS35 0 0 0 0 6 ( 32) ALA38 0 0 0 0 5 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j0x_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH T:G MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 29) HIS34 0 0 0 0 39 ( 30) LYS35 0 0 0 0 8 ( 33) ALA38 0 0 0 0 5 prot.sequence apqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j0y_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH T:T MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 29) HIS34 36 0 0 0 0 ( 30) LYS35 9 0 0 0 0 ( 33) ALA38 5 0 0 0 0 prot.sequence apqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j29_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A:A MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DA(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 3 8 0 0 0 0 0 0 0 (274) ARG283 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j2a_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A:C MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 35 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j2b_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A:C MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DA(T7):DG(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 0 9 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlyftgsdifnknmrahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j2c_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH C:A MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DC(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 2 6 0 0 0 0 0 0 0 (274) ARG283 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkYnayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j2d_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH C:C MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 34 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j2e_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH C:T MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 33 ( 26) LYS35 0 0 0 0 5 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j2f_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH G:A MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DA(P10):DG(T7) chainA (225) LYS234 0 0 0 0 0 0 0 6 1 0 (262) TYR271 0 0 0 0 0 0 0 0 0 6 (274) ARG283 0 0 0 0 0 0 0 0 0 3 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j2g_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH G:G MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DG(T7):DG(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 3 6 0 0 0 0 0 0 0 (262) TYR271 4 0 0 0 0 0 0 0 0 0 (274) ARG283 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkYnayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j2h_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH G:T MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 31 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j2i_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH T:C MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j2j_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH T:G MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DT(T7):DG(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 0 5 0 0 0 0 0 0 0 (274) ARG283 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j2k_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH T:T MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 35 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5j2m_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA AND EFDA- TRIPHOSPHATE, A TRANSLOCATION-DEFECTIVE RT INHIBITOR organism=? DNA sequence DG(T707):DG(P822) DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 4 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 6 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifQssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrthpaglkkkksvtVldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepFrkqNpdiviyqymddlyvgsdleigQHrtkieelrqhllrwglelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpKfklpiqketwetwwteywqatwipewefvntpplvklwyqle >5j2n_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA THAT HAS INCORPORATED EFDA-MP AT THE P-(POST-TRANSLOCATION) SITE AND DTMP AT THE N-(PRE- TRANSLOCATION) SITE organism=? DNA sequence DG(T707):DT(P823) DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 72) ARG72 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwRklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpQgwkgsPaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklVdfrelnkrtqdiphpaglkkkKsvtvldvgdayfsvpldedfRkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkIlepfrkqnpdiviyqymddlyvgsdLeigqhrtkieelrqhllrwglmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiViwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqle >5j2p_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA THAT HAS INCORPORATED EFDA-MP AT THE P-(POST-TRANSLOCATION) SITE AND A SECOND EFDA-MP AT THE N-(PRE-TRANSLOCATION) SITE organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (356) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (448) ARG448 7 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdiphpaglkkkKsvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdLeigqhrtkieelrqhllrwglelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkaltevIplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwGktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5j2q_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA THAT HAS INCORPORATED A MISMATCHED EFDA-MP AT THE N-(PRE-TRANSLOCATION) SITE organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (172) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (345) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (437) ARG448 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (464) GLN475 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk >5j2q_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA THAT HAS INCORPORATED A MISMATCHED EFDA-MP AT THE N-(PRE-TRANSLOCATION) SITE organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (172) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (345) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (437) ARG448 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (464) GLN475 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagirk/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdphpaglkkkkSvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwgelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkIttesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqle >5j2y_A:lambda_repressor-like_DNA-binding_domains; title=MOLECULAR INSIGHT INTO THE REGULATORY MECHANISM OF THE QUORUM-SENSING REPRESSOR RSAL IN PSEUDOMONAS AERUGINOSA organism=Pseudomonas aeruginosa DNA sequence DA(F2):DT(r26) DA(F3):DT(r25) DA(F4):DT(r24) DA(F5):DT(r23) DT(F6):DA(r22) DT(F7):DA(r21) DA(F8):DT(r20) DT(F9):DA(r19) DG(F10):DC(r18) DA(F11):DT(r17) DA(F12):DT(r16) DA(F13):DT(r15) DT(F14):DA(r14) DT(F15):DA(r13) DT(F16):DA(r12) DG(F17):DC(r11) DC(F18):DG(r10) DA(F19):DT(r9) DT(F20):DA(r8) DA(F21):DT(r7) DA(F22):DT(r6) DA(F23):DT(r5) DT(F24):DA(r4) DT(F25):DA(r3) DC(F26):DG(r2) chainA ( 32) GLN38 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER39 0 0 0 0 0 0 0 7 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) CYS40 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER42 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG43 0 0 0 0 0 0 0 13 12 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLU48 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tqpqnmafrakatrtarresqetfwsrfgisQSCgSRfengEnlpfpiylllhfyiegqitdrqladlrg >5j3e_B:PUA_domain-like; title=CRYSTAL STRUCTURE OF HUMAN THYN1 PROTEIN IN COMPLEX WITH 5- METHYLCYTOSINE CONTAINING DNA organism=? DNA sequence DG(C1):DC(D12) DC(C2):DG(D11) DC(C3):DG(D10) DA(C4):DT(D9) DA(C5):DT(D8) 5CM(C6):DG(D7) DG(C7):5CM(D6) DT(C8):DA(D5) DT(C9):DA(D4) DG(C10):DC(D3) DG(C11):DC(D2) DC(C12):DG(D1) chainB ( 64) ASN117 1 2 0 0 0 0 0 0 0 0 0 0 (149) ARG202 0 0 5 10 9 0 0 0 0 0 0 0 prot.sequence sshwlmksepesrlekgvdvkfsiedlkaqpkqttcwdgvrnyqarnflramklgeeaffyhsNckepgiaglmkivkeaypdhtqfeknnphydpsskednpkwsmvdvqfvrmmkrfiplaelksyhqahkatggplknmvlftrqRlsiqpltqeefdfvlsleekep >5j5p_A:ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase;Ribosomal_protein_S5_domain_2-like; title=AMP-PNP-STABILIZED ATPASE DOMAIN OF TOPOISOMERASE IV FROM STREPTOCOCCUS PNEUMONIAE, COMPLEX TYPE I organism=? DNA sequence DG(F1):DC(E6) DC(F2):DG(E5) DG(F3):DC(E4) DC(F4):DG(E3) DG(F5):DC(E2) DC(F6):DG(E1) chainA prot.sequence keininnynddaiqvlegldavrkrpgmyigstdgaglhhlvweivdnavdealsgfgdridvtinkdgsltvqdhgrgmptgmhamgiptveviftilhaggkfgqggyktsgglhgvgssvvnalsswleveitrdgavykqrfenggkpvttlkkigtapksktgtkvtfmpdatifsttdfkyntiserlnesafllknvtlsltdkrtdeaiefhyengvqdfvsylnedkeiltpvlyfegedngfqvevalqyndgfsdnilsfvnnvrtkdggthetglkSaitkvmndyarktgllkekdknlegsdyreglaavlsilvpeehlqfegqtkdklgsplarpvvdgivadkltfflmengelasnlirkaikardareaarkardesr >5j5q_AB:ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase;Ribosomal_protein_S5_domain_2-like; title=AMP-PNP-STABILIZED ATPASE DOMAIN OF TOPOISOMERASE IV FROM STREPTOCOCCUS PNEUMONIAE, COMPLEX TYPE II organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DG(E1):DC(F14) DC(E2):DG(F13) DA(E3):DT(F12) DT(E4):DA(F11) DA(E5):DT(F10) DT(E6):DA(F9) DA(E7):DT(F8) DT(E8):DA(F7) DA(E9):DT(F6) DT(E10):DA(F5) DA(E11):DT(F4) DT(E12):DA(F3) DG(E13):DC(F2) DC(E14):DG(F1) chainA chainB (314) SER318 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence eininnynddaiqvlegldavrkrpgmyigstdgaglhhlvweivdnavdealsgfgdridvtinkdgsltvqdhgrgmptgmhamgiptveviftilhaggkfgqggyktsgglhgvgssvvnalsswleveitrdgavykqrfenggkpvttlkkigtapksktgtkvtfmpdatifsttdfkyntiserlnesafllknvtlsltdkrtdeaiefhyengvqdfvsylnedkeiltpvlyfegedngfqvevalqyndgfsdnilsfvnnvrtkdggthetglksaitkvmndyarktgllkekdknlegsdyreglaavlsilvpeehlqfegqtkdklgsplarpvvdgivadkltfflmengelasnlirkaikardareaarkardesr/eininnynddaiqvlegldavrkrpgmyigstdgaglhhlvweivdnavdealsgfgdridvtinkdgsltvqdhgrgmptgmhamgiptveviftilhaggkfgqggyktsgglhgvgssvvnalsswleveitrdgavykqrfenggkpvttlkkigtapksktgtkvtfmpdatifsttdfkyntiserlnesafllknvtlsltdkrtdeaiefhyengvqdfvsylnedkeiltpvlyfegedngfqvevalqyndgfsdnilsfvnnvrtkdggthetglksaitkvmndyarktgllkekdknlegSdyreglaavlsilvpeehlqfegqtkdklgsplarpvvdgivadkltfflmengelasnlirkaikardareaarkardesr >5j5q_B:ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase;Ribosomal_protein_S5_domain_2-like; title=AMP-PNP-STABILIZED ATPASE DOMAIN OF TOPOISOMERASE IV FROM STREPTOCOCCUS PNEUMONIAE, COMPLEX TYPE II organism=STREPTOCOCCUS PNEUMONIAE DNA sequence DG(F1):DC(E14) DC(F2):DG(E13) DA(F3):DT(E12) DT(F4):DA(E11) DA(F5):DT(E10) DT(F6):DA(E9) DA(F7):DT(E8) DT(F8):DA(E7) DA(F9):DT(E6) DT(F10):DA(E5) DA(F11):DT(E4) DT(F12):DA(E3) DG(F13):DC(E2) DC(F14):DG(E1) chainB (314) SER318 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eininnynddaiqvlegldavrkrpgmyigstdgaglhhlvweivdnavdealsgfgdridvtinkdgsltvqdhgrgmptgmhamgiptveviftilhaggkfgqggyktsgglhgvgssvvnalsswleveitrdgavykqrfenggkpvttlkkigtapksktgtkvtfmpdatifsttdfkyntiserlnesafllknvtlsltdkrtdeaiefhyengvqdfvsylnedkeiltpvlyfegedngfqvevalqyndgfsdnilsfvnnvrtkdggthetglksaitkvmndyarktgllkekdknlegSdyreglaavlsilvpeehlqfegqtkdklgsplarpvvdgivadkltfflmengelasnlirkaikardareaarkardesr >5j70_A:Homeodomain-like; title=THE CHD1 DNA-BINDING DOMAIN IN COMPLEX WITH 17MER DNA DUPLEX organism=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) DNA sequence DC(X1):DG(W17) DG(X2):DC(W16) DC(X3):DG(W15) DT(X4):DA(W14) DG(X5):DC(W13) DG(X6):DC(W12) DA(X7):DT(W11) DA(X8):DT(W10) DA(X9):DT(W9) DT(X10):DA(W8) DT(X11):DA(W7) DT(X12):DA(W6) DC(X13):DG(W5) DC(X14):DG(W4) DA(X15):DT(W3) DG(X16):DC(W2) DC(X17):DG(W1) chainA (218) ARG1255 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 prot.sequence mdsigesevralykailkfgnlkeildeliadgtlpvksfekygetydemmeaakdcvheeeknrkeileklekhatayraklksgeikaenqpkdnpltrlslkkrekkavlfnfkgvkslnaesllsrvedlkylknlinsnykddplkfslgnntpkpvqnwssnwtkeedeklligvfkygygswtqirddpflgitdkiflskkvpgaihlgRrvdyllsflrg >5jjv_B:DNA_breaking-rejoining_enzymes; title=CRYSTAL STRUCTURE OF XERH SITE-SPECIFIC RECOMBINASE BOUND TO PALINDROMIC DIFH SUBSTRATE: POST-CLEAVAGE COMPLEX organism=? DNA sequence DT(D19):DA(C12) DT(D20):DA(C11) DT(D21):DA(C10) DT(D22):DA(C9) DC(D23):DG(C8) DA(D24):DT(C7) DT(D25):DA(C6) DA(D26):DT(C5) DA(D27):DT(C4) DC(D28):DG(C3) DT(D29):DA(C2) DA(D30):DT(C1) chainB ( 66) ARG65 0 0 0 4 13 15 0 0 0 0 0 0 ( 71) LEU70 0 0 1 1 0 0 0 0 0 0 0 0 ( 74) ASN73 0 0 6 6 0 0 0 0 0 0 0 0 ( 75) THR74 0 10 2 0 0 0 0 0 0 0 0 0 ( 76) TYR75 5 2 0 0 0 0 0 0 0 0 0 0 (124) ALA123 0 2 0 0 0 0 0 0 0 0 0 0 (125) THR124 0 0 2 0 0 0 0 0 0 0 0 0 (128) ASN127 2 11 4 0 0 0 0 0 0 0 0 0 (131) ILE130 1 0 0 0 0 0 0 0 0 0 0 0 (234) LYS239 5 4 0 0 0 0 0 0 0 0 0 0 (279) THR284 0 0 0 0 0 0 0 3 3 0 0 0 (280) GLN285 0 0 0 0 4 10 0 0 0 0 0 0 (281) ALA286 0 0 0 0 0 0 2 3 2 0 0 0 (282) TYR287 0 0 0 0 0 0 0 0 2 3 0 0 (284) TYR289 0 0 0 0 0 9 4 0 0 0 0 0 (285) LYS290 0 0 0 0 0 0 2 0 6 7 0 0 prot.sequence smkhpleelkdptenlllwigrflrykctslsnsqvkdqnkvfeclnelnqacsssqlekvckkaRnaglLgiNTYalpllkfheyfskarliterlafnslknidevmlaeflsvytgglslATkkNyrIallglfsyidkqnqdeneksyiynitlknisgnklpthlnneelekflesidkiemsakvrarnrllikiivftgmrsnealqlkikdftlengcytilikgKgdkyravmlkafhiesllkewlierelypvkndllfcnqkgsalTQAYlYKqveriinfaglrrekngahmlrhsfatllyqkrhdlilvqealghaslntsriythfdkqrleeaasiwee >5jk0_B:DNA_breaking-rejoining_enzymes; title=CRYSTAL STRUCTURE OF XERH SITE-SPECIFIC RECOMBINASE BOUND TO DIFH SUBSTRATE: PRE-CLEAVAGE COMPLEX organism=Helicobacter pylori (strain ATCC 700392 / 26695) / Helicobacter pylori (strain ATCC 700392 / 26695) DNA sequence DA(H2):DT(G29) DA(H3):DT(G28) DG(H4):DC(G27) DT(H5):DA(G26) DT(H6):DA(G25) DT(H7):DA(G24) DG(H8):DC(G23) DA(H9):DT(G22) DA(H10):DT(G21) DA(H11):DT(G20) DA(H12):DT(G19) DG(H13):DC(G18) DT(H14):DA(G17) DG(H15):DC(G16) DC(H16):DG(G15) DA(H17):DT(G14) DG(H18):DC(G13) DT(H19):DA(G12) DT(H20):DA(G11) DT(H21):DA(G10) DT(H22):DA(G9) DC(H23):DG(G8) DA(H24):DT(G7) DT(H25):DA(G6) DA(H26):DT(G5) DA(H27):DT(G4) DC(H28):DG(G3) DT(H29):DA(G2) chainB ( 65) ARG65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 12 0 0 0 0 0 ( 66) ASN66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 70) LEU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 73) ASN73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 ( 74) THR74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 ( 75) TYR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (119) ALA123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (120) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (122) LYS126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 (123) ASN127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 4 0 0 0 0 0 0 0 0 (126) ILE130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 (269) THR284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 (270) GLN285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 (271) ALA286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 (272) TYR287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 (274) TYR289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 (275) LYS290 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 7 4 0 (325) THR340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkhpleelkdptenlllwigrflrykctslsnsqvkdqnkvfeclnelnqacsssqlekvckkaRNaglLgiNTYalpllkfheyfskarlitfnslknidevmlaeflsvytgglslATkKNyrIallglfsyidkqnqdeneksyiynitlkklpthlnneelekflesidkiemsakvrarnrllikiivftgmrsnealqlkikdftlengcytilikgkgdkyravmlkafhiesllkewlierelypvkndllfcnqkgsalTQAYlYKqveriinfaglrrekngahmlrhsfatllyqkrhdlilvqealghaslnTsriythfdkqrleeaasiwe >5jlt_A:DNA-binding_C-terminal_domain_of_the_transcription_factor_MotA; title=THE CRYSTAL STRUCTURE OF THE BACTERIOPHAGE T4 MOTA C-TERMINAL DOMAIN IN COMPLEX WITH DSDNA REVEALS A NOVEL PROTEIN-DNA RECOGNITION MOTIF organism=Enterobacteria phage T4 DNA sequence DG(F1):DC(E22) DT(F2):DA(E21) DG(F3):DC(E20) DG(F4):DC(E19) DA(F5):DT(E18) DT(F6):DA(E17) DT(F7):DA(E16) DA(F8):DT(E15) DT(F9):DA(E14) DT(F10):DA(E13) DA(F11):DT(E12) DA(F12):DT(E11) DG(F13):DC(E10) DC(F14):DG(E9) DA(F15):DT(E8) DA(F16):DT(E7) DA(F17):DT(E6) DG(F18):DC(E5) DC(F19):DG(E4) DT(F20):DA(E3) DT(F21):DA(E2) DC(F22):DG(E1) chainA ( 4) ARG101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 4 0 0 0 0 ( 37) TYR134 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 38) ARG135 0 0 0 0 0 0 0 0 0 0 0 0 2 8 7 0 0 0 0 0 0 0 ( 53) ARG150 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) TYR165 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ASN187 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ratRkareitsdmeedkdlmlklldkngfvlkkveiYRsnylailekrtngiRnfeinnngnmrifgYkmmehhiqkftdigmsckiakNgnvyldikrsaenieavitvasel >5jlt_AD:DNA-binding_C-terminal_domain_of_the_transcription_factor_MotA; title=THE CRYSTAL STRUCTURE OF THE BACTERIOPHAGE T4 MOTA C-TERMINAL DOMAIN IN COMPLEX WITH DSDNA REVEALS A NOVEL PROTEIN-DNA RECOGNITION MOTIF organism=Enterobacteria phage T4 DNA sequence DG(E1):DC(F22) DA(E2):DT(F21) DA(E3):DT(F20) DG(E4):DC(F19) DC(E5):DG(F18) DT(E6):DA(F17) DT(E7):DA(F16) DT(E8):DA(F15) DG(E9):DC(F14) DC(E10):DG(F13) DT(E11):DA(F12) DT(E12):DA(F11) DA(E13):DT(F10) DA(E14):DT(F9) DT(E15):DA(F8) DA(E16):DT(F7) DA(E17):DT(F6) DT(E18):DA(F5) DC(E19):DG(F4) DC(E20):DG(F3) DA(E21):DT(F2) DC(E22):DG(F1) chainA ( 4) ARG101 0 0 0 0 4 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR134 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG135 0 0 0 0 0 0 0 7 8 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG150 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 ( 68) TYR165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 90) ASN187 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainD ( 30) ARG135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 ( 45) ARG150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 60) TYR165 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 82) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 86) TYR191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence ratRkareitsdmeedkdlmlklldkngfvlkkveiYRsnylailekrtngiRnfeinnngnmrifgYkmmehhiqkftdigmsckiakNgnvyldikrsaenieavitvasel/itsdmeedkdlmlklldkngfvlkkveiyRsnylailekrtngiRnfeinnngnmrifgYkmmehhiqkftdigmsckiakNgnvYldikrsaenieavitvasel >5jlt_BC:DNA-binding_C-terminal_domain_of_the_transcription_factor_MotA; title=THE CRYSTAL STRUCTURE OF THE BACTERIOPHAGE T4 MOTA C-TERMINAL DOMAIN IN COMPLEX WITH DSDNA REVEALS A NOVEL PROTEIN-DNA RECOGNITION MOTIF organism=Enterobacteria phage T4 DNA sequence DG(G1):DC(H22) DT(G2):DA(H21) DG(G3):DC(H20) DG(G4):DC(H19) DA(G5):DT(H18) DT(G6):DA(H17) DT(G7):DA(H16) DA(G8):DT(H15) DT(G9):DA(H14) DT(G10):DA(H13) DA(G11):DT(H12) DA(G12):DT(H11) DG(G13):DC(H10) DC(G14):DG(H9) DA(G15):DT(H8) DA(G16):DT(H7) DA(G17):DT(H6) DG(G18):DC(H5) DC(G19):DG(H4) DT(G20):DA(H3) DT(G21):DA(H2) DC(G22):DG(H1) chainB ( 32) ARG135 0 0 14 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG150 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) TYR165 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) TYR191 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 33) TYR134 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 34) ARG135 0 0 0 0 0 0 0 0 0 0 0 0 2 6 11 0 0 0 0 0 0 0 ( 49) ARG150 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) TYR165 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ASN187 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 88) ASN189 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 90) TYR191 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence reitsdmeedkdlmlklldkngfvlkkveiyRsnylailekrtngiRnfeinnngnmrifgYkmmehhiqkftdigmsckiakngnvYldikrsaenieavitvasel/kareitsdmeedkdlmlklldkngfvlkkveiYRsnylailekrtngiRnfeinnngnmrifgYkmmehhiqkftdigmsckiakNgNvYldikrsaenieavitvasel >5jlw_D:Homeodomain-like; title=ANTPHD WITH 15BP DNA DUPLEX R-MONOTHIOATED AT CYTIDINE-8 organism=Drosophila melanogaster DNA sequence DC(F2):DG(E15) DT(F3):DA(E14) DC(F4):DG(E13) DT(F5):DA(E12) DA(F6):DT(E11) DA(F7):DT(E10) DT(F8):DA(E9) DG(F9):DC(E7) DG(F10):DG(E6) DC(F11):DA(E5) DT(F12):DA(E4) DT(F13):DA(E3) DT(F14):DG(E2) DC(F15):DA(E1) chainD ( 2) ARG5 0 0 12 8 7 0 0 0 0 0 0 0 0 0 ( 40) ARG43 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 44) ILE47 0 0 0 0 0 2 4 0 0 0 0 0 0 0 ( 47) GLN50 0 0 0 0 0 0 1 10 2 0 0 0 0 0 ( 48) ASN51 0 0 0 0 5 13 0 0 0 0 0 0 0 0 prot.sequence gRqtytryqtlelekefhfnryltrrrrieiahalslteRqikIwfQNrrmkwkken >5jlx_D:Homeodomain-like; title=ANTPHD WITH 15BP DNA DUPLEX S-MONOTHIOATED AT CYTIDINE-8 organism=Drosophila melanogaster DNA sequence DA(E1):DC(F15) DG(E2):DT(F14) DA(E3):DT(F13) DA(E4):DT(F12) DA(E5):DC(F11) DG(E6):DG(F10) DC(E7):DG(F9) DA(E9):DT(F8) DT(E10):DA(F7) DT(E11):DA(F6) DA(E12):DT(F5) DG(E13):DC(F4) DA(E14):DT(F3) DG(E15):DC(F2) chainD ( 3) ARG5 0 0 0 0 0 0 0 0 0 8 6 7 0 0 ( 45) ILE47 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 48) GLN50 0 0 0 0 0 3 12 0 0 0 0 0 0 0 ( 49) ASN51 0 0 0 0 0 0 0 0 11 5 0 0 0 0 prot.sequence rgRqtytryqtlelekefhfnryltrrrrieiahalslterqikIwfQNrrmkwkken >5jrg_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING THE DNA WITH TETRAHYDROFURAN (THF) organism=HOMO SAPIENS DNA sequence DA(I1):DT(J145) DT(I2):DA(J144) DC(I3):DG(J143) DA(I4):DT(J142) DA(I5):DT(J141) DT(I6):DA(J140) DA(I7):DT(J139) DT(I8):DA(J138) DC(I9):DG(J137) DC(I10):DG(J136) DA(I11):DT(J135) DC(I12):DG(J134) DC(I13):DG(J133) DT(I14):DA(J132) DG(I15):DC(J131) DC(I16):DG(J130) DA(I17):DT(J129) DG(I18):DC(J128) DA(I19):DT(J127) DT(I20):DA(J126) DT(I21):DA(J125) DC(I22):DG(J124) DT(I23):DA(J123) DA(I24):DT(J122) DC(I25):DG(J121) DC(I26):DG(J120) DA(I28):DT(J119) DA(I29):DT(J118) DA(I30):DT(J116) DG(I31):DC(J115) DT(I32):DA(J114) DG(I33):DC(J113) DT(I34):DA(J112) DA(I35):DT(J111) DT(I36):DA(J110) DT(I37):DA(J109) DT(I38):DA(J108) DG(I39):DC(J107) DG(I40):DC(J106) DA(I41):DT(J105) DA(I42):DT(J104) DA(I43):DT(J103) DC(I44):DG(J102) DT(I45):DA(J101) DG(I46):DC(J100) DC(I47):DG(J99) DT(I48):DA(J98) DC(I49):DG(J97) DC(I50):DG(J96) DA(I51):DT(J95) DT(I52):DA(J94) DC(I53):DG(J93) DA(I54):DT(J92) DA(I55):DT(J91) DA(I56):DT(J90) DA(I57):DT(J89) DG(I58):DC(J88) DG(I59):DC(J87) DC(I60):DG(J86) DA(I61):DT(J85) DT(I62):DA(J84) DG(I63):DC(J83) DT(I64):DA(J82) DT(I65):DA(J81) DC(I66):DG(J80) DA(I67):DT(J79) DG(I68):DC(J78) DC(I69):DG(J77) DT(I70):DA(J76) DG(I71):DC(J75) DA(I72):DT(J74) DA(I73):DT(J73) DC(I74):DG(J72) DC(I75):DG(J71) DA(I76):DT(J70) DG(I77):DC(J69) DC(I78):DG(J68) DT(I79):DA(J67) DG(I80):DC(J66) DA(I81):DT(J65) DA(I82):DT(J64) DC(I83):DG(J63) DA(I84):DT(J62) DT(I85):DA(J61) DG(I86):DC(J60) DC(I87):DG(J59) DC(I88):DG(J58) DT(I89):DA(J57) DT(I90):DA(J56) DT(I91):DA(J55) DT(I92):DA(J54) DG(I93):DC(J53) DA(I94):DT(J52) DT(I95):DA(J51) DG(I96):DC(J50) DG(I97):DC(J49) DA(I98):DT(J48) DG(I99):DC(J47) DC(I100):DG(J46) DA(I101):DT(J45) DG(I102):DC(J44) DT(I103):DA(J43) DT(I104):DA(J42) DT(I105):DA(J41) DC(I106):DG(J40) DC(I107):DG(J39) DA(I108):DT(J38) DA(I109):DT(J37) DA(I110):DT(J36) DT(I111):DA(J35) DA(I112):DT(J34) DC(I113):DG(J33) DA(I114):DT(J32) DC(I115):DG(J31) DT(I116):DA(J30) DT(I118):DA(J28) DT(I119):DA(J27) DG(I120):DC(J26) DG(I121):DC(J25) DT(I122):DA(J24) DA(I123):DT(J23) DG(I124):DC(J22) DA(I125):DT(J21) DA(I126):DT(J20) DT(I127):DA(J19) DC(I128):DG(J18) DT(I129):DA(J17) DG(I130):DC(J16) DC(I131):DG(J15) DA(I132):DT(J14) DG(I133):DC(J13) DG(I134):DC(J12) DT(I135):DA(J11) DG(I136):DC(J10) DG(I137):DC(J9) DA(I138):DT(J8) DT(I139):DA(J7) DA(I140):DT(J6) DT(I141):DA(J5) DT(I142):DA(J4) DG(I143):DC(J3) DA(I144):DT(J2) DT(I145):DA(J1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 1) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kkrKrsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RkrsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5jrg_G:Histone-fold; title=CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING THE DNA WITH TETRAHYDROFURAN (THF) organism=? DNA sequence DA(J1):DT(I145) DT(J2):DA(I144) DC(J3):DG(I143) DA(J4):DT(I142) DA(J5):DT(I141) DT(J6):DA(I140) DA(J7):DT(I139) DT(J8):DA(I138) DC(J9):DG(I137) DC(J10):DG(I136) DA(J11):DT(I135) DC(J12):DG(I134) DC(J13):DG(I133) DT(J14):DA(I132) DG(J15):DC(I131) DC(J16):DG(I130) DA(J17):DT(I129) DG(J18):DC(I128) DA(J19):DT(I127) DT(J20):DA(I126) DT(J21):DA(I125) DC(J22):DG(I124) DT(J23):DA(I123) DA(J24):DT(I122) DC(J25):DG(I121) DC(J26):DG(I120) DA(J27):DT(I119) DA(J28):DT(I118) DA(J30):DT(I116) DG(J31):DC(I115) DT(J32):DA(I114) DG(J33):DC(I113) DT(J34):DA(I112) DA(J35):DT(I111) DT(J36):DA(I110) DT(J37):DA(I109) DT(J38):DA(I108) DG(J39):DC(I107) DG(J40):DC(I106) DA(J41):DT(I105) DA(J42):DT(I104) DA(J43):DT(I103) DC(J44):DG(I102) DT(J45):DA(I101) DG(J46):DC(I100) DC(J47):DG(I99) DT(J48):DA(I98) DC(J49):DG(I97) DC(J50):DG(I96) DA(J51):DT(I95) DT(J52):DA(I94) DC(J53):DG(I93) DA(J54):DT(I92) DA(J55):DT(I91) DA(J56):DT(I90) DA(J57):DT(I89) DG(J58):DC(I88) DG(J59):DC(I87) DC(J60):DG(I86) DA(J61):DT(I85) DT(J62):DA(I84) DG(J63):DC(I83) DT(J64):DA(I82) DT(J65):DA(I81) DC(J66):DG(I80) DA(J67):DT(I79) DG(J68):DC(I78) DC(J69):DG(I77) DT(J70):DA(I76) DG(J71):DC(I75) DG(J72):DC(I74) DT(J73):DA(I73) DT(J74):DA(I72) DC(J75):DG(I71) DA(J76):DT(I70) DG(J77):DC(I69) DC(J78):DG(I68) DT(J79):DA(I67) DG(J80):DC(I66) DA(J81):DT(I65) DA(J82):DT(I64) DC(J83):DG(I63) DA(J84):DT(I62) DT(J85):DA(I61) DG(J86):DC(I60) DC(J87):DG(I59) DC(J88):DG(I58) DT(J89):DA(I57) DT(J90):DA(I56) DT(J91):DA(I55) DT(J92):DA(I54) DG(J93):DC(I53) DA(J94):DT(I52) DT(J95):DA(I51) DG(J96):DC(I50) DG(J97):DC(I49) DA(J98):DT(I48) DG(J99):DC(I47) DC(J100):DG(I46) DA(J101):DT(I45) DG(J102):DC(I44) DT(J103):DA(I43) DT(J104):DA(I42) DT(J105):DA(I41) DC(J106):DG(I40) DC(J107):DG(I39) DA(J108):DT(I38) DA(J109):DT(I37) DA(J110):DT(I36) DT(J111):DA(I35) DA(J112):DT(I34) DC(J113):DG(I33) DA(J114):DT(I32) DC(J115):DG(I31) DT(J116):DA(I30) DT(J118):DA(I29) DT(J119):DA(I28) DG(J120):DC(I26) DG(J121):DC(I25) DT(J122):DA(I24) DA(J123):DT(I23) DG(J124):DC(I22) DA(J125):DT(I21) DA(J126):DT(I20) DT(J127):DA(I19) DC(J128):DG(I18) DT(J129):DA(I17) DG(J130):DC(I16) DC(J131):DG(I15) DA(J132):DT(I14) DG(J133):DC(I13) DG(J134):DC(I12) DT(J135):DA(I11) DG(J136):DC(I10) DG(J137):DC(I9) DA(J138):DT(I8) DT(J139):DA(I7) DA(J140):DT(I6) DT(J141):DA(I5) DT(J142):DA(I4) DG(J143):DC(I3) DA(J144):DT(I2) DT(J145):DA(I1) chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >5jub_AB:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF COMR FROM S.THERMOPHILUS IN COMPLEX WITH DNA AND ITS SIGNALLING PEPTIDE COMS. organism=Streptococcus thermophilus LMD-9 DNA sequence DG(Z3):DC(X18) DT(Z4):DA(X17) DG(Z5):DC(X16) DA(Z6):DT(X15) DC(Z7):DG(X14) DA(Z8):DT(X13) DT(Z9):DA(X12) DA(Z10):DT(X11) DT(Z11):DA(X10) DA(Z12):DT(X9) DT(Z13):DA(X8) DG(Z14):DC(X7) DT(Z15):DA(X6) DC(Z16):DG(X5) DT(Z17):DA(X4) DC(Z18):DG(X3) chainA ( 31) THR33 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 33) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 6 13 13 0 ( 34) GLN36 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 ( 37) ARG39 0 0 0 0 0 0 0 0 0 0 10 8 2 0 0 0 ( 43) SER45 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB ( 28) THR33 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG35 0 16 13 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) GLN36 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 ( 33) ILE38 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG39 0 0 0 4 12 8 0 0 0 0 0 0 0 0 0 0 ( 40) SER45 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence lkdsiglriktererqqmsrevlcldgaelTvRQliRiekgeSlpsldrlsyiakrlgksmtelldqdnitipdeyyemknrlikfptyrnpdrikskltlieevyekffdilpeeelltldilenilsftsweespkveeiyedlfeqvkrkrkfstndllvidyyffhlygrkqydkklferiikrvlnqeiwtddvynivlfndlmaiaalkifhnsfsdfltvvdkalavieksqlysykpsvfvlkakyellhkenkkeaaenydkaivfasvledsvleesikagkladglg/siglriktererqqmsrevlcldgaelTvRQlIRiekgeSlpsldrlsyiakrlgksmtelldqdnitipdeyyemknrlikfptyrnpdrikskltlieevyekffdilpeeelltldilenilsftsweespkveeiyedlfeqvkrkrkfstndllvidyyffhlygrkqydkklferiikrvlnqeiwtddvynivlfndlmaiaalkifhnsfsdfltvvdkalavieksqlysykpsvfvlkakyellhkenkkeaaenydkaivfasvledsvleesikagkladgl >5jub_B:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF COMR FROM S.THERMOPHILUS IN COMPLEX WITH DNA AND ITS SIGNALLING PEPTIDE COMS. organism=Streptococcus thermophilus LMD-9 DNA sequence DG(X3):DC(Z18) DA(X4):DT(Z17) DG(X5):DC(Z16) DA(X6):DT(Z15) DC(X7):DG(Z14) DA(X8):DT(Z13) DT(X9):DA(Z12) DA(X10):DT(Z11) DT(X11):DA(Z10) DA(X12):DT(Z9) DT(X13):DA(Z8) DG(X14):DC(Z7) DT(X15):DA(Z6) DC(X16):DG(Z5) DA(X17):DT(Z4) DC(X18):DG(Z3) chainB ( 28) THR33 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 30) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 8 13 16 0 ( 31) GLN36 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 ( 33) ILE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 ( 34) ARG39 0 0 0 0 0 0 0 0 0 0 8 12 4 0 0 0 ( 40) SER45 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence siglriktererqqmsrevlcldgaelTvRQlIRiekgeSlpsldrlsyiakrlgksmtelldqdnitipdeyyemknrlikfptyrnpdrikskltlieevyekffdilpeeelltldilenilsftsweespkveeiyedlfeqvkrkrkfstndllvidyyffhlygrkqydkklferiikrvlnqeiwtddvynivlfndlmaiaalkifhnsfsdfltvvdkalavieksqlysykpsvfvlkakyellhkenkkeaaenydkaivfasvledsvleesikagkladgl >5jum_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING DCTP OPPOSITE N-(2'-DEOXYGUANOSIN-8- YL)-3-AMINOBENZANTHRONE (C8-DG-ABA) organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 1 0 (380) ARG382 0 0 12 7 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5jvt_AD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF TRANSCRIPTION FACTOR FLI1 IN COMPLEX WITH AN 11-MER DNA GACCGGAAGTG organism=Homo sapiens DNA sequence DC(F14):DG(E11) DA(F15):DT(E10) DC(F16):DG(E9) DT(F17):DA(E8) DT(F18):DA(E7) DC(F19):DG(E6) DC(F20):DG(E5) DG(F21):DC(E4) DG(F22):DC(E3) DT(F23):DA(E2) DC(F24):DG(E1) DG(B1):DC(C24) DA(B2):DT(C23) DC(B3):DG(C22) DC(B4):DG(C21) DG(B5):DC(C20) DG(B6):DC(C19) DA(B7):DT(C18) DA(B8):DT(C17) DG(B9):DC(C16) DT(B10):DA(C15) DG(B11):DC(C14) chainA ( 55) ASP333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 ( 56) LYS334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 59) ARG337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 16 7 0 0 0 0 ( 62) ARG340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 0 0 0 0 0 0 ( 63) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 4 0 0 ( 67) LYS345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainD ( 55) ASP333 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) LYS334 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG337 0 0 0 0 7 16 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ALA338 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG340 0 0 0 0 0 0 11 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR341 0 0 5 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS345 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gqiqlwqfllellsdsanascitwegtngefkmtdpdevarrwgerkskpnmnyDKlsRalRYyydKnimtkvhgkryaykfdfhgiaqalqphpt/gqiqlwqfllellsdsanascitwegtngefkmtdpdevarrwgerkskpnmnyDKlsRAlRYyydKnimtkvhgkryaykfdfhgiaqalqp >5jvt_G:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF TRANSCRIPTION FACTOR FLI1 IN COMPLEX WITH AN 11-MER DNA GACCGGAAGTG organism=Homo sapiens DNA sequence DG(H1):DC(I24) DA(H2):DT(I23) DC(H3):DG(I22) DC(H4):DG(I21) DG(H5):DC(I20) DG(H6):DC(I19) DA(H7):DT(I18) DA(H8):DT(I17) DG(H9):DC(I16) DT(H10):DA(I15) DG(H11):DC(I14) chainG ( 55) ASP333 0 0 0 0 5 1 0 0 0 0 0 ( 56) LYS334 0 0 0 0 0 0 3 0 0 0 0 ( 59) ARG337 0 0 0 0 21 15 4 0 0 0 0 ( 60) ALA338 0 0 0 0 0 0 0 1 0 0 0 ( 62) ARG340 0 0 0 15 10 0 0 0 0 0 0 ( 63) TYR341 0 0 0 0 0 0 6 8 2 0 0 ( 67) LYS345 0 0 0 0 0 0 0 0 0 1 0 prot.sequence gqiqlwqfllellsdsanascitwegtngefkmtdpdevarrwgerkskpnmnyDKlsRAlRYyydKnimtkvhgkryaykfdfhgiaqalqp >5jxy_A:Uracil-DNA_glycosylase-like; title=ENZYME-SUBSTRATE COMPLEX OF TDG CATALYTIC DOMAIN BOUND TO A G/U ANALOG organism=Homo sapiens DNA sequence DC(C1):DG(D28) DA(C2):DT(D27) DG(C3):DC(D26) DC(C4):DG(D25) DT(C5):DA(D24) DC(C6):DG(D23) DT(C7):DA(D22) DG(C8):DC(D21) DT(C9):DA(D20) DA(C10):DT(D19) DC(C11):DG(D18) DT(C13):DA(D16) DG(C14):DC(D15) DA(C15):DT(D14) DG(C16):DC(D13) DC(C17):DG(D12) DG(C18):DC(D11) DA(C19):DT(D10) DT(C20):DA(D9) DG(C21):DC(D8) DG(C22):DC(D7) DA(C23):DT(D6) DC(C24):DG(D5) DA(C25):DT(D4) DG(C26):DC(D3) DC(C27):DG(D2) DT(C28):DA(D1) chainA ( 91) LYS201 0 0 0 0 0 0 0 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ALA274 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ARG275 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) CYS276 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ALA277 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) GLN278 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnHfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgsKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARCAQfpraqdkvhyyiklkdlrdqlkgiernm >5k07_A: title=CRYSTAL STRUCTURE OF CREN7-DSDNA (GTAATTGC) COMPLEX organism=SULFOLOBUS SOLFATARICUS P2 DNA sequence DG(B101):DC(C116) DT(B102):DG(C115) DA(B103):DT(C114) DA(B104):DT(C113) DT(B105):DA(C112) DT(B106):DA(C111) DG(B107):DT(C110) DC(B108):DG(C109) chainA ( 23) TRP26 0 0 0 9 5 0 0 0 ( 25) LEU28 0 0 21 14 0 0 0 0 ( 27) PRO30 0 1 4 0 0 0 0 0 ( 33) VAL36 0 0 1 0 0 0 0 0 ( 35) ILE38 0 0 0 3 0 0 0 0 ( 48) ARG51 0 0 0 4 17 6 0 0 prot.sequence gkkpvkvktpagkeaelvpekvWaLaPkgrkgVkIglfkdpetgkyfRhklpddypi >5k17_B: title=CRYSTAL STRUCTURE OF CREN7-DSDNA (GTGATCGC) COMPLEX organism=SULFOLOBUS SOLFATARICUS P2 DNA sequence DG(F109):DC(E108) DT(F110):DG(E107) DG(F111):DC(E106) DA(F112):DT(E105) DT(F113):DA(E104) DC(F114):DG(E103) DG(F115):DT(E102) DC(F116):DG(E101) chainB ( 25) TRP26 0 0 0 5 9 0 0 0 ( 27) LEU28 0 0 0 0 18 20 0 0 ( 29) PRO30 0 0 0 0 0 5 8 0 ( 32) ARG33 0 0 0 0 0 0 1 10 ( 35) VAL36 0 0 0 0 0 3 0 0 ( 37) ILE38 0 0 0 0 3 0 0 0 ( 50) ARG51 0 0 8 14 5 0 0 0 prot.sequence ssgkkpvkvktpagkeaelvpekvWaLaPkgRkgVkIglfkdpetgkyfRhklpddypi >5k1y_ABCDEF:"Winged_helix"_DNA-binding_domain; title=P2(1) STRUCTURE OF PNOB8 ASPA-DNA COMPLEX organism=SULFOLOBUS SP. NOB8H2 DNA sequence DT(N13):DT(P38) DG(N14):DT(P37) DT(N15):DC(P36) DC(N16):DT(P35) DA(N17):DT(P34) DC(N18):DG(P33) DG(N19):DC(P32) DA(N20):DT(P31) DA(N21):DT(P30) DC(N22):DG(P29) DT(N23):DA(P28) DA(N24):DC(P27) DT(N25):DG(P26) DG(N26):DC(P25) DT(N27):DA(P24) DA(N28):DT(P23) DG(N29):DC(P22) DT(N30):DA(P21) DT(N31):DA(P20) DC(N32):DG(P19) DG(N33):DC(P18) DT(N34):DA(P17) DG(N35):DC(P16) DA(N36):DT(P15) DC(N37):DT(P14) DA(N38):DC(P13) DA(N39):DA(P12) DT(N40):DA(P11) DG(N41):DG(P10) DA(N42):DC(P9) DC(N43):DA(P8) DA(N44):DC(P7) DA(N45):DT(P6) chainC ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 3 11 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) LYS3 0 0 0 0 0 0 0 6 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 1 3 13 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 36) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 ( 37) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 11 6 0 0 0 0 0 0 0 0 0 0 ( 38) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainB ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 7 10 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE45 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 8 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 7 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 6 9 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 prot.sequence tdkyifltprayiivhllkvgkakaseisentqipYQTviQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv/gKistdkyifltprayiivhllkvgkakaseisentqipYQTvIQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevvq/gkistdkyifltprayiivhllkvgkakaseisentqipYQTviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv/gKistdkyifltprayiivhllkvgkakaseisentqipYQTviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevvq/gkistdkyifltprayiivhllkvgkakaseisentqipYQTviqnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv/gKistdkyifltprayiivhllkvgkakaseisentqipYQTviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevvq >5k1y_E:"Winged_helix"_DNA-binding_domain; title=P2(1) STRUCTURE OF PNOB8 ASPA-DNA COMPLEX organism=SULFOLOBUS SP. NOB8H2 DNA sequence DT(P6):DA(N45) DC(P7):DA(N44) DA(P8):DC(N43) DC(P9):DA(N42) DG(P10):DG(N41) DA(P11):DT(N40) DA(P12):DA(N39) DC(P13):DA(N38) DT(P14):DC(N37) DT(P15):DA(N36) DC(P16):DG(N35) DA(P17):DT(N34) DC(P18):DG(N33) DG(P19):DC(N32) DA(P20):DT(N31) DA(P21):DT(N30) DC(P22):DG(N29) DT(P23):DA(N28) DA(P24):DT(N27) DC(P25):DG(N26) DG(P26):DT(N25) DC(P27):DA(N24) DA(P28):DT(N23) DG(P29):DC(N22) DT(P30):DA(N21) DT(P31):DA(N20) DC(P32):DG(N19) DG(P33):DC(N18) DT(P34):DA(N17) DT(P35):DC(N16) DC(P36):DT(N15) DT(P37):DG(N14) DT(P38):DT(N13) chainE ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 6 8 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gkistdkyifltprayiivhllkvgkakaseisentqipYQTviqnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv >5k58_ABEF:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF THE K. PNEUMONIA SLMA-DNA COMPLEX BOUND TO THE C- TERMINAL OF THE CELL DIVISION PROTEIN FTSZ organism=Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) DNA sequence DG(T2):DC(R13) DT(T3):DA(R12) DG(T4):DC(R11) DA(T5):DT(R10) DG(T6):DC(R9) DT(T7):DA(R8) DA(T8):DT(R7) DC(T9):DG(R6) DT(T10):DA(R5) DC(T11):DG(R4) DA(T12):DT(R3) DC(T13):DG(R2) chainE ( 26) THR34 0 0 0 0 0 0 6 4 0 0 0 0 ( 37) GLU45 0 0 0 0 0 0 1 5 0 0 0 0 ( 38) ALA46 0 0 0 0 0 0 0 0 1 3 6 0 ( 39) ALA47 0 0 0 0 0 0 0 0 0 0 1 0 ( 41) TYR49 0 0 0 0 0 0 0 8 4 0 0 0 ( 42) ARG50 0 0 0 0 0 0 0 0 0 0 0 8 chainF ( 25) THR34 1 3 0 0 0 0 0 0 0 0 0 0 ( 36) GLU45 6 1 0 0 0 0 0 0 0 0 0 0 ( 40) TYR49 10 0 0 0 0 0 0 0 0 0 0 0 chainA ( 26) THR34 0 0 0 0 3 2 0 0 0 0 0 0 ( 36) SER44 0 1 0 0 0 0 0 0 0 0 0 0 ( 37) GLU45 0 0 0 0 9 2 0 0 0 0 0 0 ( 38) ALA46 0 5 2 2 0 0 0 0 0 0 0 0 ( 39) ALA47 0 1 0 0 0 0 0 0 0 0 0 0 ( 41) TYR49 0 0 0 3 8 0 0 0 0 0 0 0 ( 42) ARG50 5 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) THR34 0 0 0 0 0 0 0 0 0 0 6 1 ( 36) GLU45 0 0 0 0 0 0 0 0 0 0 1 11 ( 40) TYR49 0 0 0 0 0 0 0 0 0 0 0 9 prot.sequence rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvmrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq/nrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvmrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq/rnrreeilqslalmlessdgsqritTaklaasvgvsEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvmrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq/nrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvmrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq >5k58_B:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF THE K. PNEUMONIA SLMA-DNA COMPLEX BOUND TO THE C- TERMINAL OF THE CELL DIVISION PROTEIN FTSZ organism=Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) DNA sequence DG(R2):DC(T13) DT(R3):DA(T12) DG(R4):DC(T11) DA(R5):DT(T10) DG(R6):DC(T9) DT(R7):DA(T8) DA(R8):DT(T7) DC(R9):DG(T6) DT(R10):DA(T5) DC(R11):DG(T4) DA(R12):DT(T3) DC(R13):DG(T2) chainB ( 25) THR34 1 6 0 0 0 0 0 0 0 0 0 0 ( 36) GLU45 11 1 0 0 0 0 0 0 0 0 0 0 ( 40) TYR49 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvmrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq >5k5h_A:beta-beta-alpha_zinc_fingers; title=HOMO SAPIENS CCCTC-BINDING FACTOR (CTCF) ZNF4-7 AND DNA COMPLEX STRUCTURE organism=Homo sapiens DNA sequence DC(C3):DG(B12) DG(C4):DC(B11) DC(C5):DG(B10) DC(C6):DG(B9) DC(C7):DG(B8) DC(C8):DG(B7) DC(C9):DG(B6) DT(C10):DA(B5) DG(C11):DC(B4) DC(C12):DG(B3) DT(C13):DA(B2) DG(C14):DC(B1) chainA ( 13) GLU362 7 1 0 0 0 0 0 0 0 0 0 0 ( 15) SER364 2 1 0 0 0 0 0 0 0 0 0 0 ( 16) LYS365 0 5 9 2 0 0 0 0 0 0 0 0 ( 19) ARG368 0 0 0 13 17 0 0 0 0 0 0 0 ( 41) ASP390 0 0 0 0 1 0 0 0 0 0 0 0 ( 43) TYR392 0 0 0 6 12 0 0 0 0 0 0 0 ( 44) LYS393 0 0 0 0 0 8 4 0 0 0 0 0 ( 47) ARG396 0 0 0 0 0 1 9 16 0 0 0 0 ( 69) GLN418 0 0 0 0 0 0 0 9 11 0 0 0 ( 72) THR421 0 0 0 0 0 0 0 0 3 4 0 0 ( 99) ARG448 0 0 0 0 0 0 0 0 0 3 8 6 (101) SER450 0 0 0 0 0 0 0 0 3 6 0 0 (102) ASP451 0 0 0 0 0 0 0 0 0 0 0 4 (105) VAL454 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence pfkcsmcdyasvEvSKlkRhirshtgerpfqcslcsyasrDtYKlkRhmrthsgekpyecyicharftQsgTmkmhilqkhtenvakfhcphcdtviaRkSDlgVhlrkqh >5k5i_A:beta-beta-alpha_zinc_fingers; title=HOMO SAPIENS CCCTC-BINDING FACTOR (CTCF) ZNF5-8 AND DNA COMPLEX STRUCTURE IN SPACE GROUP P65 organism=Homo sapiens DNA sequence DC(B1):DG(C12) DC(B2):DG(C11) DC(B3):DG(C10) DT(B4):DA(C9) DG(B5):DC(C8) DC(B6):DG(C7) DT(B7):DA(C6) DG(B8):DC(C5) DG(B9):DC(C4) DC(B10):DG(C3) DA(B11):DT(C2) DC(B12):DG(C1) chainA ( 14) ASP390 4 0 0 0 0 0 0 0 0 0 0 0 ( 16) TYR392 27 5 0 0 0 0 0 0 0 0 0 0 ( 17) LYS393 3 9 6 0 0 0 0 0 0 0 0 0 ( 20) ARG396 0 1 13 18 0 0 0 0 0 0 0 0 ( 42) GLN418 0 0 0 10 14 0 0 0 0 0 0 0 ( 45) THR421 0 0 0 0 4 5 2 0 0 0 0 0 ( 72) ARG448 0 0 0 0 0 0 0 8 0 0 0 0 ( 74) SER450 0 0 0 0 0 5 0 0 0 0 0 0 ( 75) ASP451 0 0 0 0 0 0 1 9 7 0 0 0 ( 78) VAL454 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence spfqcslcsyasrDtyKlkRhmrthsgekpyecyicharftQsgTmkmhilqkhtenvakfhcphcdtviarkSDlgvhlrkqhsyieqgkkcrycdavfheryaliqhqksh >5k5j_A:beta-beta-alpha_zinc_fingers; title=HOMO SAPIENS CCCTC-BINDING FACTOR (CTCF) ZNF5-8 AND DNA COMPLEX STRUCTURE IN SPACE GROUP P41212 organism=Homo sapiens DNA sequence DT(C1):DA(B12) DT(C2):DA(B11) DG(C3):DC(B10) DC(C4):DG(B9) DC(C5):DG(B8) DA(C6):DT(B7) DG(C7):DC(B6) DC(C8):DG(B5) DA(C9):DT(B4) DG(C10):DC(B3) DG(C11):DC(B2) DG(C12):DC(B1) chainA ( 17) TYR392 0 0 0 0 0 0 0 0 0 0 6 14 ( 18) LYS393 0 0 0 0 0 0 0 0 0 5 11 0 ( 21) ARG396 0 0 0 0 0 0 0 0 16 12 2 0 ( 43) GLN418 0 0 0 0 0 0 0 14 10 0 0 0 ( 46) THR421 0 0 0 0 0 2 5 3 0 0 0 0 ( 73) ARG448 0 0 0 0 9 0 0 0 0 0 0 0 ( 75) SER450 0 0 0 0 0 0 7 1 0 0 0 0 ( 76) ASP451 0 0 0 8 9 1 0 0 0 0 0 0 ( 79) VAL454 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence gspfqcslcsyasrdtYKlkRhmrthsgekpyecyicharftQsgTmkmhilqkhtenvakfhcphcdtviaRkSDlgVhlrkqhsyieqgkkcrycdavfheryaliqhqksh >5k5l_F:beta-beta-alpha_zinc_fingers; title=HOMO SAPIENS CCCTC-BINDING FACTOR (CTCF) ZNF6-8 AND H19 SEQUENCE DNA COMPLEX STRUCTURE organism=Homo sapiens DNA sequence DG(C1):DC(D11) DT(C2):DA(D10) DT(C3):DA(D9) DG(C4):DC(D8) DC(C5):DG(D7) DC(C6):DG(D6) DG(C7):DC(D5) DC(C8):DG(D4) DG(C9):DC(D3) DT(C10):DA(D2) DG(C11):DC(D1) chainF ( 13) ARG448 0 0 0 0 0 16 12 7 0 0 0 ( 15) SER450 0 0 0 0 0 0 1 4 0 0 0 ( 16) ASP451 0 0 0 0 4 9 0 0 0 0 0 prot.sequence kfhcphcdtviaRkSDlgvhlrkqhsyieqgkkcrycdavfheryaliqhqkshkne >5k5o_ABCD:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF ASPA-26MER DNA COMPLEX organism=SULFOLOBUS SP. NOB8H2 DNA sequence DA(N1):DT(M26) DG(N2):DC(M25) DT(N3):DA(M24) DT(N4):DA(M23) DC(N5):DG(M22) DG(N6):DC(M21) DT(N7):DA(M20) DG(N8):DC(M19) DA(N9):DT(M18) DC(N10):DG(M17) DA(N11):DT(M16) DT(N12):DA(M15) DT(N13):DA(M14) DG(N14):DC(M13) DT(N15):DA(M12) DC(N16):DG(M11) DA(N17):DT(M10) DC(N18):DG(M9) DG(N19):DC(M8) DA(N20):DT(M7) DA(N21):DT(M6) DC(N22):DG(M5) DT(N23):DA(M4) DA(N24):DT(M3) DC(N25):DG(M2) DG(N26):DC(M1) chainA ( 45) GLN46 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) LYS3 0 1 3 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 4 14 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE45 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 38) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 15 ( 39) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 42) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 chainD ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 6 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 13 6 2 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 44) ILE45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 ( 48) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence gkistdkyifltprayiivhllkvgkakaseisentqipyqtviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevvq/gKistdkyifltprayiivhllkvgkakaseisentqipYQTvIQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv/stdkyifltprayiivhllkvgkakaseisentqipyQTviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv/gKistdkyifltprayiivhllkvgkakaseisentqipyQTvIQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevvq >5k5o_B:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF ASPA-26MER DNA COMPLEX organism=? DNA sequence DA(N1):DT(M26) DG(N2):DC(M25) DT(N3):DA(M24) DT(N4):DA(M23) DC(N5):DG(M22) DG(N6):DC(M21) DT(N7):DA(M20) DG(N8):DC(M19) DA(N9):DT(M18) DC(N10):DG(M17) DA(N11):DT(M16) DT(N12):DA(M15) DT(N13):DA(M14) DG(N14):DC(M13) DT(N15):DA(M12) DC(N16):DG(M11) DA(N17):DT(M10) DC(N18):DG(M9) DG(N19):DC(M8) DA(N20):DT(M7) DA(N21):DT(M6) DC(N22):DG(M5) DT(N23):DA(M4) DA(N24):DT(M3) DC(N25):DG(M2) DG(N26):DC(M1) chainB ( 2) LYS3 0 1 3 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 4 14 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE45 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gKistdkyifltprayiivhllkvgkakaseisentqipYQTvIQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv >5k5q_ABCDEF:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF ASPA-DNA COMPLEX: NOVEL CENTROMERE BINDNG PROTEIN- CENTROMERE COMPLEX organism=SULFOLOBUS SP. NOB8H2 DNA sequence DA(P7):DT(N44) DA(P8):DT(N43) DA(P9):DT(N42) DT(P10):DA(N41) DT(P11):DA(N40) DG(P12):DC(N39) DC(P13):DG(N38) DT(P14):DA(N37) DC(P15):DG(N36) DT(P16):DA(N35) DA(P17):DT(N34) DT(P18):DA(N33) DG(P19):DC(N32) DT(P20):DA(N31) DT(P21):DA(N30) DA(P22):DT(N29) DA(P23):DT(N28) DT(P24):DA(N27) DC(P25):DG(N26) DG(P26):DT(N25) DC(P27):DA(N24) DA(P28):DT(N23) DG(P29):DC(N22) DA(P30):DT(N21) DG(P31):DC(N20) DC(P32):DG(N19) DA(P33):DT(N18) DT(P34):DA(N17) DA(P35):DT(N16) DT(P36):DA(N14) DT(P37):DA(N13) chainC ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 9 5 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 12 5 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 16 12 7 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 chainA ( 37) TYR41 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN42 0 0 0 0 0 0 0 0 0 5 12 16 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR43 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ILE45 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 10 11 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 chainE ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 3 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 2) LYS3 0 0 0 0 0 0 6 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 6 13 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 9 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stdkyifltprayiivhllkvgkakaseisentqipYQTvIqnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevvq/gKistdkyifltprayiivhllkvgkakaseisentqipYQTvIQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevvq/gKistdkyifltprayiivhllkvgkakaseisentqipYQTviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv/gKistdkyifltprayiivhllkvgkakaseisentqipYQTviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvev/gkistdkyifltprayiivhllkvgkakaseisentqipYQTviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv/gKistdkyifltprayiivhllkvgkakaseisentqipYQTviQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevvq >5k5q_D:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF ASPA-DNA COMPLEX: NOVEL CENTROMERE BINDNG PROTEIN- CENTROMERE COMPLEX organism=SULFOLOBUS SP. NOB8H2 DNA sequence DA(N13):DT(P37) DA(N14):DT(P36) DT(N16):DA(P35) DA(N17):DT(P34) DT(N18):DA(P33) DG(N19):DC(P32) DC(N20):DG(P31) DT(N21):DA(P30) DC(N22):DG(P29) DT(N23):DA(P28) DA(N24):DC(P27) DT(N25):DG(P26) DG(N26):DC(P25) DA(N27):DT(P24) DT(N28):DA(P23) DT(N29):DA(P22) DA(N30):DT(P21) DA(N31):DT(P20) DC(N32):DG(P19) DA(N33):DT(P18) DT(N34):DA(P17) DA(N35):DT(P16) DG(N36):DC(P15) DA(N37):DT(P14) DG(N38):DC(P13) DC(N39):DG(P12) DA(N40):DT(P11) DA(N41):DT(P10) DT(N42):DA(P9) DT(N43):DA(P8) DT(N44):DA(P7) chainD ( 2) LYS3 0 0 0 0 0 0 5 12 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 7 12 16 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gKistdkyifltprayiivhllkvgkakaseisentqipYQTviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvev >5k5r_ABCDEF:"Winged_helix"_DNA-binding_domain; title=ASPA-32MER DNA,CRYSTAL FORM 2 organism=SULFOLOBUS SP. NOB8H2 DNA sequence DT(N13):DA(P38) DA(N14):DT(P37) DT(N15):DA(P36) DT(N16):DA(P35) DA(N17):DT(P34) DT(N18):DA(P33) DG(N19):DC(P32) DC(N20):DG(P31) DT(N21):DA(P30) DC(N22):DG(P29) DT(N23):DA(P28) DA(N24):DC(P27) DT(N25):DG(P26) DG(N26):DC(P25) DA(N27):DT(P24) DT(N28):DA(P23) DT(N29):DA(P22) DA(N30):DT(P21) DA(N31):DT(P20) DC(N32):DG(P19) DA(N33):DT(P18) DT(N34):DA(P17) DA(N35):DT(P16) DG(N36):DC(P15) DA(N37):DT(P14) DG(N38):DC(P13) DC(N39):DG(P12) DA(N40):DT(P11) DA(N41):DT(P10) DA(N42):DT(P9) DC(N43):DG(P8) DA(N44):DT(P7) chainC ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 3 9 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) LYS3 0 0 0 0 0 0 0 9 13 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 9 14 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE45 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 37) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 ( 38) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 8 9 0 0 0 0 0 0 0 0 0 ( 39) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ILE45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 42) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 chainB ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 12 9 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE45 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 7 1 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 chainF ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 8 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 7 9 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 44) ILE45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 ( 48) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence stdkyifltprayiivhllkvgkakaseisentqipYQTvIQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevvq/gKistdkyifltprayiivhllkvgkakaseisentqipYQTvIQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevvq/gkistdkyifltprayiivhllkvgkakaseisentqipYQTviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv/gKistdkyifltprayiivhllkvgkakaseisentqipYQTvIQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvev/gkistdkyifltprayiivhllkvgkakaseisentqipYQTviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv/gKistdkyifltprayiivhllkvgkakaseisentqipYQTvIQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevvq >5k5r_E:"Winged_helix"_DNA-binding_domain; title=ASPA-32MER DNA,CRYSTAL FORM 2 organism=SULFOLOBUS SP. NOB8H2 DNA sequence DT(P7):DA(N44) DG(P8):DC(N43) DT(P9):DA(N42) DT(P10):DA(N41) DT(P11):DA(N40) DG(P12):DC(N39) DC(P13):DG(N38) DT(P14):DA(N37) DC(P15):DG(N36) DT(P16):DA(N35) DA(P17):DT(N34) DT(P18):DA(N33) DG(P19):DC(N32) DT(P20):DA(N31) DT(P21):DA(N30) DA(P22):DT(N29) DA(P23):DT(N28) DT(P24):DA(N27) DC(P25):DG(N26) DG(P26):DT(N25) DC(P27):DA(N24) DA(P28):DT(N23) DG(P29):DC(N22) DA(P30):DT(N21) DG(P31):DC(N20) DC(P32):DG(N19) DA(P33):DT(N18) DT(P34):DA(N17) DA(P35):DT(N16) DA(P36):DT(N15) DT(P37):DA(N14) DA(P38):DT(N13) chainE ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 1 7 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gkistdkyifltprayiivhllkvgkakaseisentqipYQTviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv >5k97_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=FLAP ENDONUCLEASE 1 (FEN1) D233N WITH CLEAVED PRODUCT FRAGMENT AND SM3+ organism=Homo sapiens DNA sequence DG(D13):DC(F6) DA(D14):DT(F5) DC(D15):DG(F4) DG(D16):DC(F3) DG(D17):DC(F2) DT(D18):DA(F1) chainA ( 44) ALA45 2 0 0 0 0 0 ( 45) VAL46 12 0 0 0 0 0 ( 47) GLN48 11 8 0 0 0 0 ( 52) LEU53 10 0 0 0 0 0 ( 64) MET65 5 0 0 0 0 0 (319) ARG320 0 0 1 0 0 0 prot.sequence giqglakliadvapsairendiksyfgrkvaidasmsiyqfliAVrQggdvLqneegettshlMgmfyrtirmmengikpvyvfdgkppqlksgelakrserraeaekqlqqaqaagaeqevekftkrlvkvtkqhndeckhllslmgipyldapseaeascaalvkagkvyaaatedmdcltfgspvlmrhltasEakklpiqefhlsrilqelglnqeqfvdlcillgsnycesirgigpkravdliqkhksieeivrrldpnkypvpenwlhkeahqlflepevldpesvelkwsepneeelikfmcgekqfseeRirsgvkrlsksrqgstlevlfq >5k98_B:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF HIPA-HIPB-O2-O3 COMPLEX organism=ESCHERICHIA COLI MP020980.2 DNA sequence DT(T697):DA(E722) DC(T698):DG(E721) DC(T699):DG(E720) DC(T700):DG(E719) DT(T701):DA(E718) DA(T702):DT(E717) DT(T703):DA(E716) DC(T704):DG(E715) DC(T705):DG(E714) DC(T706):DG(E713) DC(T707):DG(E712) DT(T708):DA(E711) DT(T709):DA(E710) DA(T710):DT(E709) DA(T711):DT(E708) DG(T712):DC(E707) DG(T713):DC(E706) DG(T714):DC(E705) DG(T715):DC(E704) DA(T716):DT(E703) DT(T717):DA(E702) DA(T718):DT(E701) DG(T719):DC(E700) chainB ( 26) SER29 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS38 0 0 0 0 0 0 0 34 6 19 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 0 0 0 4 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 0 0 0 0 3 4 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR41 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fqkiysptqlanamklvrqqngwtqSelakkigiKQATiSnfennpdnttlttffkilqslelsmtlcdtk >5k98_BP:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF HIPA-HIPB-O2-O3 COMPLEX organism=ESCHERICHIA COLI MP020980.2 DNA sequence DC(E700):DG(T719) DT(E701):DA(T718) DA(E702):DT(T717) DT(E703):DA(T716) DC(E704):DG(T715) DC(E705):DG(T714) DC(E706):DG(T713) DC(E707):DG(T712) DT(E708):DA(T711) DT(E709):DA(T710) DA(E710):DT(T709) DA(E711):DT(T708) DG(E712):DC(T707) DG(E713):DC(T706) DG(E714):DC(T705) DG(E715):DC(T704) DA(E716):DT(T703) DT(E717):DA(T702) DA(E718):DT(T701) DG(E719):DC(T700) DG(E720):DC(T699) DG(E721):DC(T698) DA(E722):DT(T697) chainB ( 26) SER29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 35) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 19 6 34 0 0 0 0 0 0 0 ( 36) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 3 4 0 0 0 0 ( 37) ALA40 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 4 3 0 0 0 0 0 0 ( 38) THR41 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 chainP ( 35) LYS38 0 0 0 0 16 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN39 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA40 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR41 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER43 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fqkiysptqlanamklvrqqngwtqSelakkigiKQATiSnfennpdnttlttffkilqslelsmtlcdtk/fqkiysptqlanamklvrqqngwtqselakkigiKQATiSnfennpdnttlttffkilqslelsmtlcdtk >5kbd_AB:p53-like_transcription_factors; title=STRUCTURAL STUDIES OF TRANSCRIPTION FACTOR P73 DNA BINDING DOMAIN BOUND TO PA26 20-MER RESPONSE ELEMENT organism=Homo sapiens DNA sequence DA(D11):DT(C10) DG(D12):DC(C9) DA(D13):DT(C8) DC(D14):DG(C7) DT(D15):DA(C6) DT(D16):DA(C5) DG(D17):DC(C4) DT(D18):DA(C3) DC(D19):DG(C2) DC(D20):DG(C1) chainA (157) ARG268 0 0 0 0 0 0 7 0 0 0 (185) ALA296 0 0 1 0 0 0 0 0 0 0 (186) CYS297 0 0 3 0 0 0 0 0 0 0 (189) ARG300 0 0 7 10 8 0 0 0 0 0 chainB (157) ARG268 0 0 0 3 0 0 0 0 0 0 (185) ALA296 0 0 0 0 0 0 0 1 0 0 (186) CYS297 0 0 0 0 0 0 0 4 0 0 (189) ARG300 0 0 0 0 0 15 15 6 0 0 prot.sequence hefipsntdypgphhfevtfqqsstaksatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnRrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq/hefipsntdypgphhfevtfqqsstaksatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnRrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >5kbd_B:p53-like_transcription_factors; title=STRUCTURAL STUDIES OF TRANSCRIPTION FACTOR P73 DNA BINDING DOMAIN BOUND TO PA26 20-MER RESPONSE ELEMENT organism=Homo sapiens DNA sequence DG(C1):DC(D20) DG(C2):DC(D19) DA(C3):DT(D18) DC(C4):DG(D17) DA(C5):DT(D16) DA(C6):DT(D15) DG(C7):DC(D14) DT(C8):DA(D13) DC(C9):DG(D12) DT(C10):DA(D11) chainB (157) ARG268 0 0 0 0 0 0 3 0 0 0 (185) ALA296 0 0 1 0 0 0 0 0 0 0 (186) CYS297 0 0 4 0 0 0 0 0 0 0 (189) ARG300 0 0 6 15 15 0 0 0 0 0 prot.sequence hefipsntdypgphhfevtfqqsstaksatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnRrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >5kbj_ABG:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF REP-DNA COMPLEX organism=Staphylococcus aureus DNA sequence DA(W3):DT(R33) DT(W4):DA(R32) DC(W5):DG(R31) DT(W6):DA(R30) DG(W7):DC(R29) DG(W8):DC(R28) DA(W9):DT(R27) DC(W10):DG(R26) DG(W11):DC(R25) DT(W12):DA(R24) DT(W13):DA(R23) DC(W14):DG(R22) DG(W15):DC(R21) DA(W16):DT(R20) DT(W17):DA(R19) DT(W18):DA(R18) DT(W19):DA(R17) DT(W20):DA(R16) DC(W21):DG(R15) DG(W22):DC(R14) DA(W23):DT(R13) DA(W24):DT(R12) DC(W25):DG(R11) DT(W26):DA(R10) DT(W27):DA(R9) DC(W28):DG(R8) DT(W29):DA(R7) DG(W30):DC(R6) DG(W31):DC(R5) DA(W32):DT(R4) DC(W33):DG(R3) DG(W34):DC(R2) chainA ( 76) LYS79 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) GLU80 0 0 0 0 0 0 0 0 0 0 1 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) THR83 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) LYS84 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG99 0 0 0 0 0 4 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) LEU102 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 76) LYS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 ( 77) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 3 0 0 0 0 0 0 0 0 0 0 ( 96) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 ( 99) LEU102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 (100) ASN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 chainG prot.sequence qyftvqenykerfyqipkvfftsenyknltndmkiayailrdrlnlsiknswvdedgniyfvysneklmeilnckKEklTKikkglendglliqkRrgLnkpnilylmkpivterdiykiekeendvepy/qyftvqenykerfyqipkvfftsenyknltndmkiayailrdrlnlsiknswvdedgniyfvysneklmeilnckKEkltkikkglendglliqkRrgLNkpnilylmkpivterdiykiekeendvepy/qnqyftvqenykerfyqipkvfftsenyknltndmkiayailrdrlnlsiknswvdedgniyfvysneklmeilnCKkekltkikkglendglliQkrRGlnkpnilylmkpivterdiykiekeendv >5kbj_B:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF REP-DNA COMPLEX organism=Staphylococcus aureus DNA sequence DA(W3):DT(R33) DT(W4):DA(R32) DC(W5):DG(R31) DT(W6):DA(R30) DG(W7):DC(R29) DG(W8):DC(R28) DA(W9):DT(R27) DC(W10):DG(R26) DG(W11):DC(R25) DT(W12):DA(R24) DT(W13):DA(R23) DC(W14):DG(R22) DG(W15):DC(R21) DA(W16):DT(R20) DT(W17):DA(R19) DT(W18):DA(R18) DT(W19):DA(R17) DT(W20):DA(R16) DC(W21):DG(R15) DG(W22):DC(R14) DA(W23):DT(R13) DA(W24):DT(R12) DC(W25):DG(R11) DT(W26):DA(R10) DT(W27):DA(R9) DC(W28):DG(R8) DT(W29):DA(R7) DG(W30):DC(R6) DG(W31):DC(R5) DA(W32):DT(R4) DC(W33):DG(R3) DG(W34):DC(R2) chainB ( 76) LYS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 ( 77) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 3 0 0 0 0 0 0 0 0 0 0 ( 96) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 ( 99) LEU102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 (100) ASN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 prot.sequence qyftvqenykerfyqipkvfftsenyknltndmkiayailrdrlnlsiknswvdedgniyfvysneklmeilnckKEkltkikkglendglliqkRrgLNkpnilylmkpivterdiykiekeendvepy >5ke6_A:beta-beta-alpha_zinc_fingers; title=MOUSE KLF4 ZNF1-3 AND TPG/CPA SEQUENCE DNA COMPLEX STRUCTURE organism=Mus musculus DNA sequence DG(B1):DC(C10) DA(B2):DT(C9) DG(B3):DC(C8) DG(B4):DC(C7) DT(B5):DA(C6) DG(B6):DC(C5) DT(B7):DA(C4) DG(B8):DC(C3) DG(B9):DC(C2) DC(B10):DG(C1) chainA ( 15) LYS413 0 0 0 0 0 0 0 4 6 6 ( 17) SER415 0 0 0 0 0 0 0 0 0 5 ( 18) HIS416 0 0 0 0 0 0 19 11 0 0 ( 45) ARG443 0 0 0 0 21 12 6 0 0 0 ( 46) SER444 0 0 0 0 0 0 0 2 0 0 ( 47) ASP445 0 0 0 0 2 0 7 1 0 0 ( 48) GLU446 0 0 0 0 3 0 0 0 0 0 ( 51) ARG449 0 0 5 11 7 0 0 0 0 0 ( 73) ARG471 0 9 11 3 0 0 0 0 0 0 ( 75) ASP473 0 0 1 5 4 0 0 0 0 0 ( 76) HIS474 7 6 0 0 0 0 0 0 0 0 prot.sequence thtcdyagcgktytKsSHlkahlrthtgekpyhcdwdgcgwkfaRSDEltRhyrkhtghrpfqcqkcdrafsRsDHlalhmkrhf >5ke7_A:beta-beta-alpha_zinc_fingers; title=MOUSE KLF4 ZNF1-3 AND TPG/MPA SEQUENCE DNA COMPLEX STRUCTURE organism=Mus musculus DNA sequence DG(C1):DC(B10) DC(C2):DG(B9) DC(C3):DG(B8) DA(C4):DT(B7) 5CM(C5):DG(B6) DA(C6):DT(B5) DC(C7):DG(B4) DC(C8):DG(B3) DT(C9):DA(B2) DC(C10):DG(B1) chainA ( 17) LYS413 6 6 4 0 0 0 0 0 0 0 ( 19) SER415 4 0 0 0 0 0 0 0 0 0 ( 20) HIS416 0 0 11 17 0 0 0 0 0 0 ( 47) ARG443 0 0 0 2 11 21 0 0 0 0 ( 48) SER444 0 0 2 0 0 0 0 0 0 0 ( 49) ASP445 0 0 0 6 2 2 0 0 0 0 ( 50) GLU446 0 0 0 0 0 3 0 0 0 0 ( 53) ARG449 0 0 0 0 0 8 11 4 0 0 ( 75) ARG471 0 0 0 0 0 0 2 10 9 0 ( 77) ASP473 0 0 0 0 0 2 6 0 0 0 ( 78) HIS474 0 0 0 0 0 0 0 0 6 9 prot.sequence tathtcdyagcgktytKsSHlkahlrthtgekpyhcdwdgcgwkfaRSDEltRhyrkhtghrpfqcqkcdrafsRsDHlalhmkrhf >5ke8_A:beta-beta-alpha_zinc_fingers; title=MOUSE KLF4 E446P ZNF1-3 AND MPG/MPG SEQUENCE DNA COMPLEX STRUCTURE organism=Mus musculus DNA sequence DG(B1):DC(C10) DA(B2):DT(C9) DG(B3):DC(C8) DG(B4):DC(C7) 5CM(B5):DG(C6) DG(B6):5CM(C5) DT(B7):DA(C4) DG(B8):DC(C3) DG(B9):DC(C2) DC(B10):DG(C1) chainA ( 15) LYS413 0 0 0 0 0 0 0 7 6 2 ( 17) SER415 0 0 0 0 0 0 0 0 0 4 ( 18) HIS416 0 0 0 0 0 0 18 10 0 0 ( 45) ARG443 0 0 0 0 17 10 7 0 0 0 ( 47) ASP445 0 0 0 0 2 2 6 5 0 0 ( 48) PRO446 0 0 0 0 2 0 0 0 0 0 ( 51) ARG449 0 0 9 12 5 0 0 0 0 0 ( 73) ARG471 0 8 12 2 0 0 0 0 0 0 ( 74) SER472 0 0 0 0 2 0 0 0 0 0 ( 75) ASP473 0 0 1 6 2 0 0 0 0 0 ( 76) HIS474 3 6 0 0 0 0 0 0 0 0 prot.sequence thtcdyagcgktytKsSHlkahlrthtgekpyhcdwdgcgwkfaRsDpltRhyrkhtghrpfqcqkcdrafsRSDHlalhmkrhf >5ke9_A:beta-beta-alpha_zinc_fingers; title=MOUSE KLF4 E446P ZNF1-3 AND TPG/CPA SEQUENCE DNA COMPLEX STRUCTURE organism=Mus musculus DNA sequence DG(B1):DC(C10) DA(B2):DT(C9) DG(B3):DC(C8) DG(B4):DC(C7) DT(B5):DA(C6) DG(B6):DC(C5) DT(B7):DA(C4) DG(B8):DC(C3) DG(B9):DC(C2) DC(B10):DG(C1) chainA ( 18) LYS413 0 0 0 0 0 0 0 3 6 4 ( 20) SER415 0 0 0 0 0 0 0 0 2 4 ( 21) HIS416 0 0 0 0 0 0 12 8 0 0 ( 48) ARG443 0 0 0 0 17 12 7 0 0 0 ( 49) SER444 0 0 0 0 0 0 0 2 0 0 ( 50) ASP445 0 0 0 0 3 2 14 4 0 0 ( 51) PRO446 0 0 0 0 3 0 0 0 0 0 ( 54) ARG449 0 0 8 12 6 0 0 0 0 0 ( 76) ARG471 0 10 10 2 0 0 0 0 0 0 ( 78) ASP473 0 0 2 6 2 0 0 0 0 0 ( 79) HIS474 6 6 0 0 0 0 0 0 0 0 prot.sequence rtathtcdyagcgktytKsSHlkahlrthtgekpyhcdwdgcgwkfaRSDPltRhyrkhtghrpfqcqkcdrafsRsDHlalhmkrhf >5kea_A:beta-beta-alpha_zinc_fingers; title=MOUSE KLF4 ZNF1-3 (E446D) AND CPG/CPG SEQUENCE DNA COMPLEX STRUCTURE: FORM I organism=Mus musculus DNA sequence DG(C1):DC(B10) DC(C2):DG(B9) DC(C3):DG(B8) DA(C4):DT(B7) DC(C5):DG(B6) DG(C6):DC(B5) DC(C7):DG(B4) DC(C8):DG(B3) DT(C9):DA(B2) DC(C10):DG(B1) chainA ( 17) LYS413 4 9 6 0 0 0 0 0 0 0 ( 19) SER415 4 1 0 0 0 0 0 0 0 0 ( 20) HIS416 0 0 11 18 0 0 0 0 0 0 ( 47) ARG443 0 0 0 5 11 14 0 0 0 0 ( 49) ASP445 0 0 3 9 1 0 0 0 0 0 ( 50) ASP446 0 0 0 0 0 7 0 0 0 0 ( 53) ARG449 0 0 0 0 0 6 11 8 0 0 ( 75) ARG471 0 0 0 0 0 0 2 13 10 0 ( 76) SER472 0 0 0 0 0 2 0 0 0 0 ( 77) ASP473 0 0 0 0 0 4 7 1 0 0 ( 78) HIS474 0 0 0 0 0 0 0 0 6 4 prot.sequence tathtcdyagcgktytKsSHlkahlrthtgekpyhcdwdgcgwkfaRsDDltRhyrkhtghrpfqcqkcdrafsRSDHlalhmkrhf >5keb_A:beta-beta-alpha_zinc_fingers; title=MOUSE KLF4 ZNF1-3 (E446D) AND CPG/CPG SEQUENCE DNA COMPLEX STRUCTURE: FORM II organism=Mus musculus DNA sequence DG(C1):DC(B10) DC(C2):DG(B9) DC(C3):DG(B8) DA(C4):DT(B7) DC(C5):DG(B6) DG(C6):DC(B5) DC(C7):DG(B4) DC(C8):DG(B3) DT(C9):DA(B2) DC(C10):DG(B1) chainA ( 14) LYS413 6 6 8 0 0 0 0 0 0 0 ( 16) SER415 7 4 0 0 0 0 0 0 0 0 ( 17) HIS416 0 0 12 22 0 0 0 0 0 0 ( 44) ARG443 0 0 0 2 12 21 0 0 0 0 ( 45) SER444 0 0 2 0 0 0 0 0 0 0 ( 46) ASP445 0 0 0 3 0 4 0 0 0 0 ( 47) ASP446 0 0 0 0 0 2 0 0 0 0 ( 50) ARG449 0 0 0 0 0 8 13 7 0 0 ( 72) ARG471 0 0 0 0 0 0 3 11 9 0 ( 73) SER472 0 0 0 0 0 1 0 0 0 0 ( 74) ASP473 0 0 0 0 0 4 5 2 0 0 ( 75) HIS474 0 0 0 0 0 0 0 0 6 7 prot.sequence htcdyagcgktytKsSHlkahlrthtgekpyhcdwdgcgwkfaRSDDltRhyrkhtghrpfqcqkcdrafsRSDHlalhmkrhf >5kfa_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: GROUND STATE AT PH7.0 (K+ MES) WITH 1 CA2+ ION organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 1 4 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfb_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION WITH 1 MM MN2+ FOR 90S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (376) LEU378 0 0 0 0 0 1 2 0 (380) ARG382 0 0 1 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfc_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION WITH 1 MM MN2+ FOR 180S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 2 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 1 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfd_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION WITH 1 MM MN2+ FOR 300S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 2 0 0 0 0 0 0 (380) ARG382 0 0 0 0 9 12 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfe_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION WITH 1 MM MN2+ FOR 600S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 2 0 0 0 0 0 0 (380) ARG382 0 0 0 0 9 16 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kff_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION WITH 1 MM MN2+ FOR 1800S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (376) LEU378 0 0 0 0 0 0 2 0 (380) ARG382 0 0 4 2 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfg_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION WITH 10 MM MN2+ FOR 30S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 2 0 0 0 0 0 0 (380) ARG382 0 0 0 0 4 4 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfh_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION WITH 10 MM MN2+ FOR 90S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (376) LEU378 0 0 0 0 0 0 1 0 (380) ARG382 0 5 4 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfi_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION WITH 10 MM MN2+ FOR 120S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (380) ARG382 0 7 2 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfj_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION WITH 10 MM MN2+ FOR 180S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (380) ARG382 0 5 2 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfk_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION WITH 10 MM MN2+ FOR 300S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (380) ARG382 0 5 1 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfl_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION WITH 10 MM MN2+ FOR 600S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 4 7 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfm_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX WITH SP-DATP-ALPHA-S: GROUND STATE AT PH7.0 (K+ MES) WITH 1 CA2+ ION organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (317) SER322 0 0 0 0 0 0 1 0 (377) ARG382 0 0 2 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfn_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX WITH SP-DATP-ALPHA-S: REACTION WITH 1 MM MG2+ FOR 1800S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (318) SER322 1 2 0 0 0 0 0 0 (374) LEU378 0 0 1 2 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslrrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfo_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX WITH SP-DATP-ALPHA-S: REACTION WITH 1 MM MN2+ FOR 1800S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (318) SER322 1 2 0 0 0 0 0 0 (374) LEU378 0 2 2 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslrrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfp_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX WITH SP-DATP-ALPHA-S: REACTION WITH 20 MM MG2+ FOR 600S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 1 0 0 0 0 0 0 (376) LEU378 0 0 1 2 0 0 0 0 (380) ARG382 0 0 0 0 0 0 2 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfq_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX WITH SP-DATP-ALPHA-S: REACTION WITH 10 MM MN2+ FOR 600S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (380) ARG382 0 2 1 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfr_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX WITH SP-DATP-ALPHA-S: REACTION WITH 20 MM MN2+ FOR 600S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 2 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 1 2 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfs_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA R61A-DNA TERNARY COMPLEX: GROUND STATE AT PH7.0 (K+ MES) WITH 1 CA2+ ION organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 1 0 (380) ARG382 0 2 5 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtasmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kft_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA R61A-DNA TERNARY COMPLEX: REACTION WITH 1 MM MG2+ FOR 40S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 1 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtasmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfu_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA R61A-DNA TERNARY COMPLEX: REACTION WITH 1 MM MG2+ FOR 80S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (376) LEU378 0 0 0 0 0 0 2 0 (380) ARG382 0 0 1 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtasmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfv_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA R61A-DNA TERNARY COMPLEX: REACTION WITH 1 MM MG2+ FOR 140S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 2 0 0 0 0 0 0 (380) ARG382 0 0 0 0 2 3 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtasmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfw_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA R61A-DNA TERNARY COMPLEX: REACTION WITH 1 MM MG2+ FOR 200S organism=HOMO SAPIENS DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtasmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfx_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA R61A-DNA TERNARY COMPLEX: REACTION WITH 1 MM MG2+ FOR 300S organism=HOMO SAPIENS DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (376) LEU378 0 0 0 0 3 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtasmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslrrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfy_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION FIRST WITH 1 MM MN2+ FOR 1800S THEN WITH 5 MM MN2+ FOR 60S AT 4 DEGREE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 1 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kfz_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION FIRST WITH 1 MM MN2+ FOR 1800S THEN WITH 5 MM MN2+ FOR 60S AT 14 DEGREE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 1 0 1 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslrrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kg0_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION FIRST WITH 1 MM MN2+ FOR 1800S THEN WITH 5 MM MN2+ FOR 60S AT 22 DEGREE organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (376) LEU378 0 0 0 0 0 1 2 0 (380) ARG382 0 0 2 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kg1_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION FIRST WITH 1 MM MN2+ FOR 1800S THEN WITH 5 MM MN2+ FOR 60S AT 30 DEGREE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 1 0 1 0 0 0 0 (380) ARG382 0 0 0 0 0 2 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kg2_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION FIRST WITH 1 MM MN2+ FOR 1800S THEN WITH 5 MM MN2+ FOR 60S AT 37 DEGREE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 2 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kg3_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION FIRST WITH 1 MM MN2+ FOR 1800S THEN WITH 10 MM MN2+ FOR 60S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 2 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kg4_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION FIRST WITH 1 MM MN2+ FOR 1800S THEN WITH 10 MM MG2+ FOR 60S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 0 0 3 0 0 0 0 (380) ARG382 0 0 0 0 0 3 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kg5_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION FIRST WITH 1 MM MN2+ FOR 1800S THEN WITH 10 MM CD2+ FOR 60S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 2 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslrrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kg6_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION FIRST WITH 1 MM MN2+ FOR 1800S THEN WITH 10 MM CA2+ FOR 60S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (321) SER322 0 2 0 0 0 0 0 0 (377) LEU378 0 2 0 0 0 0 0 0 (381) ARG382 0 0 0 0 1 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kg7_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION FIRST WITH 1 MM MN2+ FOR 1800S THEN WITH 10 MM ZN2+ FOR 60S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (380) ARG382 0 0 4 1 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5kgf_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURAL MODEL OF 53BP1 BOUND TO A UBIQUITYLATED AND METHYLATED NUCLEOSOME, AT 4.5 A RESOLUTION organism=HOMO SAPIENS / XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 5) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 ( 6) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 16) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 21 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 4) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vkkpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rvlrdniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaRaraksrssraglqfpvgrvhrllrrgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkkte/gkKrkrsrkesysvyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/kkpHRyrpgtvalreirryqkstelliRklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaRaraksrssraglqfpvgrvhrllrrgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkkte/rkRsrkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >5kgf_G:Histone-fold; title=STRUCTURAL MODEL OF 53BP1 BOUND TO A UBIQUITYLATED AND METHYLATED NUCLEOSOME, AT 4.5 A RESOLUTION organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainG ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaRaraksrssraglqfpvgrvhrllrrgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkkte >5kk1_ABCDEF:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF PNOB8 ASPA-DNA COMPLEX. organism=SULFOLOBUS SP. NOB8H2 DNA sequence DA(N13):DT(P38) DA(N14):DT(P37) DA(N15):DT(P36) DT(N16):DA(P35) DA(N17):DT(P34) DT(N18):DA(P33) DG(N19):DC(P32) DC(N20):DG(P31) DT(N21):DA(P30) DC(N22):DG(P29) DT(N23):DA(P28) DA(N24):DC(P27) DT(N25):DG(P26) DG(N26):DC(P25) DA(N27):DT(P24) DT(N28):DA(P23) DT(N29):DA(P22) DA(N30):DT(P21) DA(N31):DT(P20) DC(N32):DG(P19) DA(N33):DT(P18) DT(N34):DA(P17) DA(N35):DT(P16) DG(N36):DC(P15) DA(N37):DT(P14) DG(N38):DC(P13) DC(N39):DG(P12) DA(N40):DT(P11) DA(N41):DT(P10) DT(N42):DA(P9) DT(N43):DA(P8) chainC ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 3 6 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) LYS3 0 0 0 0 0 0 0 6 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 11 14 17 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE45 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 37) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 ( 38) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 11 7 0 0 0 0 0 0 0 0 ( 39) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 41) ILE45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 42) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 7 11 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE45 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 1 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 9 6 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 chainF ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 5 7 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 10 4 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 ( 48) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 prot.sequence stdkyifltprayiivhllkvgkakaseisentqipYQTvIQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv/gKistdkyifltprayiivhllkvgkakaseisentqipYQTvIQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevvq/gkistdkyifltprayiivhllkvgkakaseisentqipYQTviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv/gKistdkyifltprayiivhllkvgkakaseisentqipYQTvIQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv/gkistdkyifltprayiivhllkvgkakaseisentqipYQtviQnirwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv/gKistdkyifltprayiivhllkvgkakaseisentqipYQTviQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevvq >5kk1_D:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF PNOB8 ASPA-DNA COMPLEX. organism=SULFOLOBUS SP. NOB8H2 DNA sequence DA(P8):DT(N43) DA(P9):DT(N42) DT(P10):DA(N41) DT(P11):DA(N40) DG(P12):DC(N39) DC(P13):DG(N38) DT(P14):DA(N37) DC(P15):DG(N36) DT(P16):DA(N35) DA(P17):DT(N34) DT(P18):DA(N33) DG(P19):DC(N32) DT(P20):DA(N31) DT(P21):DA(N30) DA(P22):DT(N29) DA(P23):DT(N28) DT(P24):DA(N27) DC(P25):DG(N26) DG(P26):DT(N25) DC(P27):DA(N24) DA(P28):DT(N23) DG(P29):DC(N22) DA(P30):DT(N21) DG(P31):DC(N20) DC(P32):DG(N19) DA(P33):DT(N18) DT(P34):DA(N17) DA(P35):DT(N16) DT(P36):DA(N15) DT(P37):DA(N14) DT(P38):DA(N13) chainD ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 6 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 ( 41) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 17 14 11 0 0 0 ( 42) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 44) ILE45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 45) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 ( 48) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 prot.sequence gKistdkyifltprayiivhllkvgkakaseisentqipYQTvIQniRwllaegyvvkeqkgeeiyykltdkgkqlataelekirklvevv >5kk5_A: title=ASCPF1(E993A)-CRRNA-DNA TERNARY COMPLEX organism=Acidaminococcus sp. (strain BV3L6) / Acidaminococcus sp. (strain BV3L6) DNA sequence DC(D-8):DG(C8) DA(D-7):DT(C7) DT(D-6):DA(C6) DG(D-5):DC(C5) DT(D-4):DA(C4) DT(D-3):DA(C3) DT(D-2):DA(C2) DC(D-1):DG(C1) chainA (160) THR167 0 0 0 0 2 1 0 0 (163) SER170 0 0 0 0 0 1 0 0 (541) LYS548 0 0 0 0 0 4 7 0 (590) LYS603 0 0 0 0 0 0 0 32 (591) MET604 0 0 0 0 0 0 2 2 (594) LYS607 0 0 0 0 3 6 9 2 prot.sequence egftnlyqvsktlrfelipqgktlkhiqeqgfieedkarndhykelkpiidriyktyadqclqlvqldwenlsaaidsyrkekteetrnalieeqatyrnaihdyfigrtdnltdainkrhaeiykglfkaelfngkvlkqlgttehenallrsfdkftTyfSgfyenrknvfsaedistaiphrivqdnfpkfkenchiftrlitavpslrehfenvkkaigifvstsieevfsfpfynqlltqtqidlynqllggisreagtekikglnevlnlaiqkndetahiiaslphrfiplfkqilsdrntlsfileefksdeeviqsfckyktllrnenvletaealfnelnsidlthifishkkletissalcdhwdtlrnalyerriseltgkitksakekvqrslkhedinlqeiisaagkelseafkqktseilshahaaldqplpttlkkqeekeilksqldsllglyhlldwfavdesnevdpefsarltgiklemepslsfynkarnyatkkpysvekfklnfqmptlasgwdvnKeknngailfvknglyylgimpkqlsfeptektsegfdkmyydyfpdaaKMipKcstqlkavtahfqthttpillsnnfiepleitkeiydlnnpekepkkfqtayakktgdqkgyrealckwidftrdflskytkttsidlsslrpssqykdlgeyyaelnpllyhisfqriaekeimdavetgklylfqiynkdfakghhgkpnlhtlywtglfspenlaktsiklngqaelfyrpksiikdrrftsdkfffhvpitlnyqaanspskfnqrvnaylkehpetpiigidrgernliyitvidstgkileqrslntiqqfdyqkkldnrekervaarqawsvvgtikdlkqgylsqviheivdlmihyqavvvlanlekavyqqfekmlidklnclvlkdypaekvggvlnpyqltdqftsfakmgtqsgflfyvpapytskidpltgfvdpfvwktiknhesrkhflegfdflhydvktgdfilhfkmnrnlsfqrglpgfmpaeknetqfdakgtpfiagkriyrdlypanelialleekgivfrdgsnilpkllenddshaidtmvalirsvlqmrnsnaatgedyinspvrdlngvcfdsrfqnpewpmdadangayhialkgqlllnhlkeskdlklqngisnqdwlayiqelrn >5kkq_D:beta-beta-alpha_zinc_fingers; title=HOMO SAPIENS CCCTC-BINDING FACTOR (CTCF) ZNF3-7 AND DNA COMPLEX STRUCTURE organism=Homo sapiens DNA sequence DT(E1):DA(F17) DA(E2):DT(F16) DG(E3):DC(F15) DC(E4):DG(F14) DG(E5):DC(F13) DC(E6):DG(F12) DC(E7):DG(F11) DC(E8):DG(F10) DC(E9):DG(F9) DC(E10):DG(F8) DT(E11):DA(F7) DG(E12):DC(F6) DC(E13):DG(F5) DT(E14):DA(F4) DG(E15):DC(F3) DG(E16):DC(F2) DC(E17):DG(F1) chainD ( 13) THR333 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) GLU336 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG339 0 0 5 11 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) TYR343 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLU362 0 0 0 2 9 2 0 0 0 0 0 0 0 0 0 0 0 ( 44) SER364 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) LYS365 0 0 0 0 3 10 6 0 0 0 0 0 0 0 0 0 0 ( 48) ARG368 0 0 0 0 0 0 11 17 0 0 0 0 0 0 0 0 0 ( 70) ASP390 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 72) TYR392 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 ( 73) LYS393 0 0 0 0 0 0 0 7 10 2 0 0 0 0 0 0 0 ( 76) ARG396 0 0 0 0 0 0 0 0 2 12 14 0 0 0 0 0 0 ( 98) GLN418 0 0 0 0 0 0 0 0 0 0 10 16 0 0 0 0 0 (101) THR421 0 0 0 0 0 0 0 0 0 0 0 4 5 2 0 0 0 (128) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 2 11 9 0 0 (130) SER450 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (131) ASP451 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 4 0 (134) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence phkcpdcdmafvTsgElvRhrrYkhthekpfkcsmcdyasvEvSKlkRhirshtgerpfqcslcsyasrDtYKlkRhmrthsgekpyecyicharftQsgTmkmhilqkhtenvakfhcphcdtviaRkSDlgVhlrkqhsyieq >5kl2_A:beta-beta-alpha_zinc_fingers; title=WILMS TUMOR PROTEIN (WT1) ZNF2-4 IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DA(C2):DT(B11) DC(C3):DG(B10) DT(C4):DA(B9) DC(C5):DG(B8) DC(C6):DG(B7) DC(C7):DG(B6) DA(C8):DT(B5) DC(C9):DG(B4) DG(C10):DC(B3) DC(C11):DG(B2) chainA ( 17) ARG366 7 12 13 0 0 0 0 0 0 0 ( 19) ASP368 7 2 0 0 0 0 0 0 0 0 ( 20) GLN369 0 0 5 2 0 0 0 0 0 0 ( 23) ARG372 0 0 2 12 11 0 0 0 0 0 ( 45) ARG394 0 0 0 2 12 11 0 0 0 0 ( 46) SER395 0 0 1 0 0 0 0 0 0 0 ( 47) ASP396 0 0 7 6 2 0 0 0 0 0 ( 48) HIS397 0 0 0 0 0 8 20 0 0 0 ( 51) THR400 0 0 0 0 0 0 1 0 0 0 ( 75) ARG424 0 0 0 0 0 0 11 13 17 0 ( 76) SER425 0 0 0 0 1 2 0 0 0 0 ( 77) ASP426 0 0 0 0 0 7 14 1 1 0 ( 78) GLU427 0 0 0 0 0 0 0 0 4 1 ( 81) ARG430 0 0 0 0 0 0 0 0 4 11 prot.sequence ekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRSDElvRhhnmhqr >5kl3_A:beta-beta-alpha_zinc_fingers; title=WILMS TUMOR PROTEIN (WT1) ZNF2-4 Q369H IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DA(C2):DT(B11) DC(C3):DG(B10) DT(C4):DA(B9) DC(C5):DG(B8) DC(C6):DG(B7) DC(C7):DG(B6) DA(C8):DT(B5) DC(C9):DG(B4) DG(C10):DC(B3) DC(C11):DG(B2) chainA ( 16) ARG366 4 12 9 0 0 0 0 0 0 0 ( 18) ASP368 1 1 0 0 0 0 0 0 0 0 ( 19) HIS369 0 0 7 6 0 0 0 0 0 0 ( 22) ARG372 0 0 2 11 7 0 0 0 0 0 ( 44) ARG394 0 0 0 2 12 13 0 0 0 0 ( 45) SER395 0 0 1 0 0 0 0 0 0 0 ( 46) ASP396 0 0 6 7 1 0 0 0 0 0 ( 47) HIS397 0 0 0 0 0 12 27 0 0 0 ( 50) THR400 0 0 0 0 0 0 1 0 0 0 ( 74) ARG424 0 0 0 0 0 0 9 11 14 0 ( 76) ASP426 0 0 0 0 0 1 5 1 1 0 ( 77) GLU427 0 0 0 0 0 0 0 0 2 1 ( 80) ARG430 0 0 0 0 0 0 0 0 4 11 prot.sequence kpyqcdfkdcerrfsRsdHlkRhqrrhtgvkpfqcktcqrkfsRsDHlkthtrthtgekpfscrwpscqkkfaRsDelvRhhnmhqr >5kl4_D:beta-beta-alpha_zinc_fingers; title=WILMS TUMOR PROTEIN (WT1) ZNF2-4 Q369H IN COMPLEX WITH FORMYLATED DNA organism=Homo sapiens DNA sequence DA(F2):DT(E11) DG(F4):DG(E10) DC(F5):DG(E8) DC(F6):DG(E7) DC(F7):DG(E6) DA(F8):DT(E5) DC(F9):DG(E4) DG(F10):DC(E3) DC(F11):DG(E2) chainD ( 16) ARG366 10 5 0 0 0 0 0 0 0 ( 18) ASP368 1 1 0 0 0 0 0 0 0 ( 19) HIS369 0 2 0 0 0 0 0 0 0 ( 22) ARG372 0 3 12 9 0 0 0 0 0 ( 44) ARG394 0 0 2 14 7 0 0 0 0 ( 46) ASP396 0 5 6 2 0 0 0 0 0 ( 47) HIS397 0 0 0 1 11 26 0 0 0 ( 50) THR400 0 0 0 0 0 1 0 0 0 ( 74) ARG424 0 0 0 0 0 12 12 10 0 ( 76) ASP426 0 0 0 0 4 7 1 0 0 ( 77) GLU427 0 0 0 0 0 0 0 2 1 ( 80) ARG430 0 0 0 0 0 0 0 3 12 prot.sequence kpyqcdfkdcerrfsRsDHlkRhqrrhtgvkpfqcktcqrkfsRsDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhq >5kl5_A:beta-beta-alpha_zinc_fingers; title=WILMS TUMOR PROTEIN (WT1) ZNF2-4 Q369H IN COMPLEX WITH CARBOXYLATED DNA organism=Homo sapiens DNA sequence DG(B2):DC(C11) DC(B3):DG(C10) DG(B4):DC(C9) DT(B5):DA(C8) DG(B6):DC(C7) DG(B7):DC(C6) DG(B8):DC(C5) DG(B10):DG(C4) DT(B11):DA(C2) chainA ( 18) ARG366 0 0 0 0 0 0 0 6 10 ( 20) ASP368 0 0 0 0 0 0 0 1 1 ( 21) HIS369 0 0 0 0 0 0 0 1 0 ( 24) ARG372 0 0 0 0 0 8 12 2 0 ( 46) ARG394 0 0 0 0 6 12 2 0 0 ( 48) ASP396 0 0 0 0 0 2 6 2 0 ( 49) HIS397 0 0 0 25 11 1 0 0 0 ( 52) THR400 0 0 0 1 0 0 0 0 0 ( 76) ARG424 0 15 13 11 0 0 0 0 0 ( 78) ASP426 0 1 1 8 1 0 0 0 0 ( 79) GLU427 3 5 0 0 0 0 0 0 0 ( 82) ARG430 11 2 0 0 0 0 0 0 0 prot.sequence sekpyqcdfkdcerrfsRsDHlkRhqrrhtgvkpfqcktcqrkfsRsDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhq >5kl6_A:beta-beta-alpha_zinc_fingers; title=WILMS TUMOR PROTEIN (WT1) Q369R ZNF2-4 IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(B2):DC(C11) DC(B3):DG(C10) DG(B4):DC(C9) DT(B5):DA(C8) DG(B6):DC(C7) DG(B7):DC(C6) DG(B8):DC(C5) DG(B9):DC(C4) DG(B10):DC(C3) DT(B11):DA(C2) chainA ( 16) ARG366 0 0 0 0 0 0 0 2 12 4 ( 18) ASP368 0 0 0 0 0 0 0 0 0 1 ( 19) ARG369 0 0 0 0 0 0 14 14 4 0 ( 22) ARG372 0 0 0 0 0 6 12 0 0 0 ( 44) ARG394 0 0 0 0 13 12 2 0 0 0 ( 46) ASP396 0 0 0 0 0 2 9 0 0 0 ( 47) HIS397 0 0 0 29 11 0 0 0 0 0 ( 50) THR400 0 0 0 1 0 0 0 0 0 0 ( 74) ARG424 0 15 12 12 0 0 0 0 0 0 ( 76) ASP426 0 1 1 6 0 0 0 0 0 0 ( 77) GLU427 1 2 0 0 0 0 0 0 0 0 ( 80) ARG430 11 4 0 0 0 0 0 0 0 0 prot.sequence kpyqcdfkdcerrfsRsDRlkRhqrrhtgvkpfqcktcqrkfsRsDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhqr >5kl7_A:beta-beta-alpha_zinc_fingers; title=WILMS TUMOR PROTEIN (WT1) ZNF2-4Q369R IN COMPLEX WITH CARBOXYLATED DNA organism=Homo sapiens DNA sequence DG(B2):DC(C11) DC(B3):DG(C10) DG(B4):DC(C9) DT(B5):DA(C8) DG(B6):DC(C7) DG(B7):DC(C6) DG(B8):DC(C5) DG(B10):DG(C4) DT(B11):DA(C2) chainA ( 17) ARG366 0 0 0 0 0 0 0 7 11 ( 19) ASP368 0 0 0 0 0 0 0 1 1 ( 20) ARG369 0 0 0 0 0 0 0 4 0 ( 23) ARG372 0 0 0 0 0 14 12 1 0 ( 45) ARG394 0 0 0 0 6 12 2 0 0 ( 47) ASP396 0 0 0 0 0 0 5 6 0 ( 48) HIS397 0 0 0 26 11 1 0 0 0 ( 51) THR400 0 0 0 1 0 0 0 0 0 ( 75) ARG424 0 13 12 11 0 0 0 0 0 ( 77) ASP426 0 0 2 8 4 0 0 0 0 ( 78) GLU427 1 3 0 0 0 0 0 0 0 ( 81) ARG430 12 4 0 0 0 0 0 0 0 prot.sequence ekpyqcdfkdcerrfsRsDRlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhq >5kn8_A:DNA-glycosylase; title=MUTY N-TERMINAL DOMAIN IN COMPLEX WITH UNDAMAGED DNA organism=Geobacillus stearothermophilus DNA sequence DA(D13):DT(C12) DG(D14):DC(C11) DC(D15):DG(C10) DA(D16):DT(C9) DC(D17):DG(C8) DA(D18):DT(C7) DG(D19):DC(C6) DG(D20):DC(C5) chainA ( 81) TYR88 0 0 0 2 12 0 0 0 (155) ALA162 0 0 0 0 0 0 0 2 (160) ARG167 0 0 0 0 0 0 8 8 prot.sequence fparefqrdlldwfarerrdlpwrkdrdpykvwvsevmlqqtrvetvipyfeqfidrfptlealadadedevlkaweglgYysRvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavngnvmrvlsrlflvtddiAkcstRkrfeqivreimayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkm >5kn9_A:DNA-glycosylase; title=MUTY N-TERMINAL DOMAIN IN COMPLEX WITH DNA CONTAINING AN INTRAHELICAL OXOG:A BASE-PAIR organism= Geobacillus stearothermophilus DNA sequence DA(D13):DT(C12) DG(D14):DC(C11) DC(D15):DG(C10) DA(D16):DT(C9) DC(D17):DG(C8) DA(D18):8OG(C7) DG(D19):DC(C6) DG(D20):DC(C5) chainA ( 81) TYR88 0 0 0 2 12 0 0 0 (155) ALA162 0 0 0 0 0 0 0 2 (160) ARG167 0 0 0 0 0 0 8 10 prot.sequence fparefqrdlldwfarerrdlpwrkdrdpykvwvsevmlqqtryetvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavngnvmrvlsrlflvtddiAkcstRkrfeqivreimayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkm >5krb_BG:Glucocorticoid_receptor-like_DNA-binding_domain; title=GCNF DNA BINDING DOMAIN - OCT4 DR0 COMPLEX organism=Mus musculus DNA sequence DT(E89):DA(A120) DC(E90):DG(A119) DT(E91):DA(A118) DA(E92):DT(A117) DG(E93):DC(A116) DC(E94):DG(A115) DC(E95):DG(A114) DT(E96):DA(A113) DT(E97):DA(A112) DG(E98):DC(A111) DA(E99):DT(A110) DC(E100):DG(A109) DC(E101):DG(A108) DT(E102):DA(A107) DC(E103):DG(A106) DT(E104):DA(A105) chainB ( 22) GLU93 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 ( 25) LYS96 0 0 0 0 0 0 0 0 0 0 0 2 9 2 0 0 ( 30) ARG101 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 chainG ( 20) GLU93 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 ( 23) LYS96 0 0 0 0 0 2 7 2 0 0 0 0 0 0 0 0 ( 28) ARG101 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) PRO151 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 81) ARG154 0 0 0 0 0 0 0 0 1 8 7 0 0 0 0 0 prot.sequence qrtclicgdratglhygiiscEgcKgffkRsisnkrvyrcsrdkncvmsrkqrnrcqycrllkclqmgmnrkai/tclicgdratglhygiiscEgcKgffkRsisnkrvyrcsrdkncvmsrkqrnrcqycrllkclqmgmnrkairedgmPggRn >5krb_G:Glucocorticoid_receptor-like_DNA-binding_domain; title=GCNF DNA BINDING DOMAIN - OCT4 DR0 COMPLEX organism=Mus musculus DNA sequence DA(A105):DT(E104) DG(A106):DC(E103) DA(A107):DT(E102) DG(A108):DC(E101) DG(A109):DC(E100) DT(A110):DA(E99) DC(A111):DG(E98) DA(A112):DT(E97) DA(A113):DT(E96) DG(A114):DC(E95) DG(A115):DC(E94) DC(A116):DG(E93) DT(A117):DA(E92) DA(A118):DT(E91) DG(A119):DC(E90) DA(A120):DT(E89) chainG ( 20) GLU93 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 ( 23) LYS96 0 0 0 0 0 0 0 0 2 7 2 0 0 0 0 0 ( 28) ARG101 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 ( 78) PRO151 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 81) ARG154 0 0 0 0 0 7 8 1 0 0 0 0 0 0 0 0 prot.sequence tclicgdratglhygiiscEgcKgffkRsisnkrvyrcsrdkncvmsrkqrnrcqycrllkclqmgmnrkairedgmPggRn >5kse_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=FLAP ENDONUCLEASE 1 (FEN1) R100A WITH 5'-FLAP SUBSTRATE DNA AND SM3+ organism=Homo sapiens DNA sequence DT(E5):DA(D12) DT(E6):DA(D11) DG(E7):DC(D10) DA(E8):DT(D9) DG(E9):DC(D8) DG(E10):DC(D7) DC(E11):DG(D6) DA(E12):DT(D5) DG(E13):DC(D4) DA(E14):DT(D3) DG(E15):DC(D2) DT(E16):DA(D1) chainA ( 39) TYR40 26 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN41 2 0 0 0 0 0 0 0 0 0 0 0 ( 43) ILE44 9 0 0 0 0 0 0 0 0 0 0 0 (127) LYS128 3 0 0 0 0 0 0 0 0 0 0 0 (244) ARG245 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence giqglakliadvapsairendiksyfgrkvaidasmsiYQflIavrqggdvlqneegettshlmgmfyrtirmmengikpvyvfdgkppqlksgelakaserraeaekqlqqaqaagaeqevekftKrlvkvtkqhndeckhllslmgipyldapseaeascaalvkagkvyaaatedmdcltfgspvlmrhltaseakklpiqefhlsrilqelglnqeqfvdlcillgsdycesirgigpkRavdliqkhksieeivrrldpnkypvpenwlhkeahqlflepevldpesvelkwsepneeelikfmcgekqfseerirsgvkrlsksrqgstlevlfq >5kt2_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERANRY COMPLEX OF HUMAN DNA POLYMERASE IOTA(26-445) INSERTING DCMPNPP OPPOSITE TEMPLATE G IN THE PRESENCE OF MG2+ organism=Homo sapiens DNA sequence DG(T841):DC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainA ( 14) TYR64 1 0 0 0 0 0 0 (280) GLU330 4 3 0 0 0 0 0 (318) ARG368 0 0 0 0 0 0 2 (331) GLN386 0 0 0 0 0 0 2 prot.sequence ssrvivhvdldcfYaqvemisnpelkdkplgvqQkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirrysgresrQcpipshviqklgydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >5kt3_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERANRY COMPLEX OF HUMAN DNA POLYMERASE IOTA(26-445) INSERTING DCMPNPP OPPOSITE TEMPLATE G IN THE PRESENCE OF MN2+ organism=Homo sapiens DNA sequence DG(T841):DC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainA ( 14) TYR64 1 0 0 0 0 0 0 (280) GLU330 5 3 0 0 0 0 0 (318) ARG368 0 0 0 0 0 0 2 (330) GLN386 0 0 0 0 0 0 2 prot.sequence ssrvivhvdldcfYaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirrygresrQcpipshviqklydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >5kt4_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERANRY COMPLEX OF HUMAN DNA POLYMERASE IOTA R96G INSERTING DCMPNPP OPPOSITE TEMPLATE G IN THE PRESENCE OF MG2+ organism=Homo sapiens DNA sequence DA(P867):DT(T847) DG(P868):DC(T846) DG(P869):DC(T845) DA(P870):DT(T844) DC(P871):DG(T843) DC(P872):DG(T842) DC(P873):DG(T841) chainA ( 14) TYR64 0 0 0 0 0 0 1 (280) GLU330 0 0 0 0 0 4 4 (318) ARG368 2 1 0 0 0 0 0 (330) GLN386 2 0 0 0 0 0 0 prot.sequence ssrvivhvdldcfYaqvemisnpelkdkplgvqqkylvvtcnyeagklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirrygresrQcpipshviqklgydvmtpmvdilmklfrnmvnvkfhltllsvcfcnlk >5kt5_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERANRY COMPLEX OF HUMAN DNA POLYMERASE IOTA R96G INSERTING DCMPNPP OPPOSITE TEMPLATE G IN THE PRESENCE OF MN2+ organism=Homo sapiens DNA sequence DG(T841):DC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainA ( 14) TYR64 1 0 0 0 0 0 0 (280) GLU330 4 3 0 0 0 0 0 (318) ARG368 0 0 0 0 0 0 2 (331) GLN386 0 0 0 0 0 0 2 prot.sequence ssrvivhvdldcfYaqvemisnpelkdkplgvqqkylvvtcnyeagklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirrysgresrQcpipshviqklgydvmtpmvdilmklfrnmvnvkfhltllsvcfcnlk >5kt6_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERANRY COMPLEX OF HUMAN DNA POLYMERASE IOTA(1-445) INSERTING DCMPNPP OPPOSITE TEMPLATE G IN THE PRESENCE OF MG2+ organism=Homo sapiens DNA sequence DA(P867):DT(T847) DG(P868):DC(T846) DG(P869):DC(T845) DA(P870):DT(T844) DC(P871):DG(T843) DC(P872):DG(T842) DC(P873):DG(T841) chainA ( 14) TYR64 0 0 0 0 0 0 1 (280) GLU330 0 0 0 0 0 3 2 (318) ARG368 2 0 0 0 0 0 0 (331) GLN386 2 0 0 0 0 0 0 prot.sequence ssrvivhvdldcfYaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvRliirrysgresrQcpipshviqklgydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >5kt7_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERANRY COMPLEX OF HUMAN DNA POLYMERASE IOTA(1-445) INSERTING DCMPNPP OPPOSITE TEMPLATE G IN THE PRESENCE OF MN2+ organism=Homo sapiens DNA sequence DA(P867):DT(T847) DG(P868):DC(T846) DG(P869):DC(T845) DA(P870):DT(T844) DC(P871):DG(T843) DC(P872):DG(T842) DC(P873):DG(T841) chainA ( 14) TYR39 0 0 0 0 0 0 1 (280) GLU305 0 0 0 0 0 3 4 (330) GLN361 2 0 0 0 0 0 0 prot.sequence ssrvivhvdldcfYaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirrygresrQcpipshviqklydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlk >5kub_A:ARM_repeat; title=BACILLUS CEREUS DNA GLYCOSYLASE ALKD BOUND TO 7-METHYLGUANINE NUCLEOBASE AND DNA CONTAINING AN OXOCARBENIUM-INTERMEDIATE ANALOG organism=Bacillus cereus DNA sequence DC(C1):DG(B12) DG(C2):DC(B11) DG(C3):DC(B10) DA(C4):DT(B9) DC(C5):DG(B8) DT(C6):DA(B7) DT(C8):DA(B5) DC(C9):DG(B4) DG(C10):DC(B3) DG(C11):DC(B2) DG(C12):DC(B1) chainA ( 29) TYR27 0 0 0 0 0 7 0 0 0 0 0 (185) LYS183 0 0 0 0 0 2 0 0 0 0 0 (217) ARG215 0 1 0 0 0 0 0 0 0 0 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskReaikhikqnyginn >5l0m_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=HLRH-1 DNA BINDING DOMAIN - 12BP OCT4 PROMOTER COMPLEX organism=Homo sapiens DNA sequence DC(C89):DG(B118) DT(C90):DA(B117) DA(C91):DT(B116) DG(C92):DC(B115) DC(C93):DG(B114) DC(C94):DG(B113) DT(C95):DA(B112) DT(C96):DA(B111) DG(C97):DC(B110) DA(C98):DT(B109) DC(C99):DG(B108) DC(C100):DG(B107) chainA ( 22) GLU104 0 0 0 2 8 1 0 0 0 0 0 0 ( 25) LYS107 0 0 0 0 2 8 2 0 0 0 0 0 ( 29) LYS111 0 0 0 0 5 1 0 0 0 0 0 0 ( 30) ARG112 0 9 7 0 0 0 0 0 0 0 0 0 ( 80) ARG162 0 0 0 0 0 10 10 1 0 0 0 0 ( 83) ARG165 0 0 0 0 0 0 0 3 8 4 0 0 prot.sequence eelcpvcgdkvsgyhyglltcEscKgffKRtvqnnkrytcienqncqidktqrkrcpycrfqkclsvgmkleavradrmRggRnkfgpmykrdral >5l1i_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING DCTP OPPOSITE O6-METHYL-2'-DEOXYGUANOSINE organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) DC(P9):DT(T3) chainA ( 51) ILE48 0 0 0 0 0 0 0 0 1 ( 64) ARG61 0 0 0 0 0 0 0 0 5 ( 65) SER62 0 0 0 0 0 0 0 0 8 (114) ARG111 0 0 0 0 0 0 0 0 7 (116) SER113 0 0 0 0 0 0 0 0 3 (117) ILE114 0 0 0 0 0 0 0 0 1 (320) SER322 0 0 0 0 0 0 1 0 0 (376) LEU378 0 0 0 0 0 1 3 0 0 (380) ARG382 0 6 3 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiIavsyearafgvtRSmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieRaSIdeayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5l1j_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING DTMPNPP OPPOSITE O6-METHYL-2'-DEOXYGUANOSINE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 64) ARG61 1 0 0 0 0 0 0 0 (320) SER322 0 1 0 0 0 0 0 0 (376) LEU378 0 0 1 6 0 0 0 0 (380) ARG382 0 0 0 0 10 15 0 0 (421) PHE423 0 3 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >5l1k_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POSTINSERTION COMPLEX OF HUMAN DNA POLYMERASE ETA BYPASSING AN O6- METHYL-2'-DEOXYGUANOSINE : DC SITE organism=Homo sapiens DNA sequence DG(T4):DC(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 41) GLN38 9 0 0 0 0 0 0 0 ( 51) ILE48 6 0 0 0 0 0 0 0 (320) SER322 0 1 0 0 0 0 0 0 (376) LEU378 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 1 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5l1l_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POSTINSERTION COMPLEX OF HUMAN DNA POLYMERASE ETA BYPASSING AN O6- METHYL-2'-DEOXYGUANOSINE : DT SITE organism=Homo sapiens DNA sequence DG(T4):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 41) GLN38 7 0 0 0 0 0 0 0 ( 51) ILE48 6 0 0 0 0 0 0 0 (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 5 2 0 0 0 0 0 (380) ARG382 0 0 0 0 10 16 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5l6l_ADEH:AbrB/MazE/MraZ-like; title=STRUCTURE OF CAULOBACTER CRESCENTUS VAPBC1 BOUND TO OPERATOR DNA organism=CAULOBACTER CRESCENTUS DNA sequence DG(N1):DC(M27) DG(N2):DC(M26) DA(N3):DT(M25) DA(N4):DT(M24) DC(N5):DG(M23) DG(N6):DC(M22) DT(N7):DA(M21) DA(N8):DT(M20) DT(N9):DA(M19) DA(N10):DT(M18) DT(N11):DA(M17) DA(N12):DT(M16) DC(N13):DG(M15) DG(N14):DC(M14) DC(N15):DG(M13) DA(N16):DT(M12) DT(N17):DA(M11) DA(N18):DT(M10) DT(N19):DA(M9) DT(N20):DA(M8) DG(N21):DC(M7) DA(N22):DT(M6) DC(N23):DG(M5) DG(N24):DC(M4) DG(N25):DC(M3) DA(N26):DT(M2) DG(N27):DC(M1) chainA ( 10) PHE9 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) SER11 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ASN13 0 0 0 0 11 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) SER14 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG18 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 14) PHE9 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER11 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ASN13 0 0 0 0 0 0 0 0 0 0 0 4 11 15 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) SER14 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG18 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 10) PHE9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 12) SER11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 ( 14) ASN13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 6 0 0 0 ( 15) SER14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 ( 19) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 chainH ( 14) SER11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 16) ASN13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 10 3 0 0 0 0 0 0 0 0 0 0 ( 17) SER14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 21) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 prot.sequence hharatgktFrSgNSeavRlprdlafgadveltlirsgdvltiypskgsiadlvatlnqmprpds/hhhhhharatgktFrSgNSeavRlprdlafgadveltlirsgdvltiypskgsiadlvatlnqmprpdsveirdedlfperpgl/hharatgktFrSgNSeavRlprdlafgadveltlirsgdvltiypskgsiadlvatlnqmprpd/hhhharatgktfrSgNSeavRlprdlafgadveltlirsgdvltiypskgsiadlvatlnqmprpdsveirdedlfperpg >5l6l_D:AbrB/MazE/MraZ-like; title=STRUCTURE OF CAULOBACTER CRESCENTUS VAPBC1 BOUND TO OPERATOR DNA organism=CAULOBACTER CRESCENTUS DNA sequence DG(N1):DC(M27) DG(N2):DC(M26) DA(N3):DT(M25) DA(N4):DT(M24) DC(N5):DG(M23) DG(N6):DC(M22) DT(N7):DA(M21) DA(N8):DT(M20) DT(N9):DA(M19) DA(N10):DT(M18) DT(N11):DA(M17) DA(N12):DT(M16) DC(N13):DG(M15) DG(N14):DC(M14) DC(N15):DG(M13) DA(N16):DT(M12) DT(N17):DA(M11) DA(N18):DT(M10) DT(N19):DA(M9) DT(N20):DA(M8) DG(N21):DC(M7) DA(N22):DT(M6) DC(N23):DG(M5) DG(N24):DC(M4) DG(N25):DC(M3) DA(N26):DT(M2) DG(N27):DC(M1) chainD ( 14) PHE9 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER11 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ASN13 0 0 0 0 0 0 0 0 0 0 0 4 11 15 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) SER14 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG18 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hhhhhharatgktFrSgNSeavRlprdlafgadveltlirsgdvltiypskgsiadlvatlnqmprpdsveirdedlfperpgl >5l9x_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY COMPLEX: REACTION WITH 10 MM MN2+ FOR 60S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 2 7 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >5lcl_AB:Putative_DNA-binding_domain; title=STRUCTURE OF THE RAD14 DNA-BINDING DOMAIN IN COMPLEX WITH C8- AMINOFLUORENE- GUANINE CONTAINING DNA organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DC(C2):DG(D14) DT(C3):DA(D13) DC(C4):DG(D12) DT(C5):DA(D11) DA(C6):DT(D10) DC(C7):DG(D9) DT(C9):DC(D8) DC(C10):DA(D7) DA(C11):DG(D6) DT(C12):DT(D5) DC(C13):DA(D4) DA(C14):DG(D3) chainA ( 43) THR230 0 3 0 0 0 0 0 0 0 0 0 0 ( 46) LYS233 0 0 0 1 0 0 0 0 0 0 0 0 ( 53) ASP240 0 0 0 3 0 0 0 0 0 0 0 0 ( 69) ASN256 9 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS258 21 0 0 0 0 0 0 0 0 0 0 0 ( 75) PHE262 44 0 0 0 0 0 0 0 0 0 0 0 chainB ( 43) THR230 0 0 0 0 0 0 0 0 0 0 0 2 ( 46) LYS233 0 0 0 0 0 0 0 0 0 1 0 0 ( 53) ASP240 0 0 0 0 0 0 0 0 0 3 0 0 ( 75) PHE262 0 0 0 0 0 0 0 0 0 0 0 42 (107) ARG294 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTecKedyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkah/apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTecKedyfltDpelndedlfhrlekpnphsgtFarmqlfvrceveafafkkwggeegldeewqrReegkahr >5lcl_B:Putative_DNA-binding_domain; title=STRUCTURE OF THE RAD14 DNA-BINDING DOMAIN IN COMPLEX WITH C8- AMINOFLUORENE- GUANINE CONTAINING DNA organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DC(C2):DG(D14) DT(C3):DA(D13) DC(C4):DG(D12) DT(C5):DA(D11) DA(C6):DT(D10) DC(C7):DG(D9) DT(C9):DC(D8) DC(C10):DA(D7) DA(C11):DG(D6) DT(C12):DT(D5) DC(C13):DA(D4) DA(C14):DG(D3) chainB ( 43) THR230 0 0 0 0 0 0 0 0 0 0 0 2 ( 46) LYS233 0 0 0 0 0 0 0 0 0 1 0 0 ( 53) ASP240 0 0 0 0 0 0 0 0 0 3 0 0 ( 75) PHE262 0 0 0 0 0 0 0 0 0 0 0 42 (107) ARG294 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTecKedyfltDpelndedlfhrlekpnphsgtFarmqlfvrceveafafkkwggeegldeewqrReegkahr >5lcm_AB:Putative_DNA-binding_domain; title=STRUCTURE OF THE RAD14 DNA-BINDING DOMAIN IN COMPLEX WITH N2- ACETYLAMINONAPHTYL- GUANINE CONTAINING DNA organism=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) DNA sequence DT(D2):DA(C14) DG(D3):DC(C13) DA(D4):DT(C12) DT(D5):DA(C11) DG(D6):DC(C10) DA(D7):DT(C9) DC(D8):DC(C7) DG(D9):DA(C6) DT(D10):DT(C5) DA(D11):DC(C4) DG(D12):DT(C3) DA(D13):DC(C2) DG(D14):DG(C1) chainA ( 43) THR230 0 0 0 0 0 0 0 0 0 0 2 0 2 ( 44) GLU231 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 47) GLU234 0 0 0 0 0 0 0 0 0 0 0 0 11 ( 53) ASP240 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 69) ASN256 0 0 0 0 0 0 0 0 0 0 0 8 1 ( 71) HIS258 0 0 0 0 0 0 0 0 0 0 0 16 0 ( 75) PHE262 0 0 0 0 0 0 0 0 0 0 0 1 49 chainB ( 43) THR230 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 53) ASP240 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 69) ASN256 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS258 17 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) PHE262 47 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTEckEdyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahrr/apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTeckedyfltDpelndedlfhrlekpNpHsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahr >5lcm_B:Putative_DNA-binding_domain; title=STRUCTURE OF THE RAD14 DNA-BINDING DOMAIN IN COMPLEX WITH N2- ACETYLAMINONAPHTYL- GUANINE CONTAINING DNA organism=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) DNA sequence DC(C2):DG(D14) DT(C3):DA(D13) DC(C4):DG(D12) DT(C5):DA(D11) DA(C6):DT(D10) DC(C7):DG(D9) DT(C9):DC(D8) DC(C10):DA(D7) DA(C11):DG(D6) DT(C12):DT(D5) DC(C13):DA(D4) DA(C14):DG(D3) chainB ( 43) THR230 0 0 0 0 0 0 0 0 0 0 0 2 ( 53) ASP240 0 0 0 0 0 0 0 0 0 2 0 0 ( 75) PHE262 0 0 0 0 0 0 0 0 0 0 0 46 prot.sequence apkciechiniemdpvlhdvfklqvckqcskehpekyalltkTeckedyfltDpelndedlfhrlekpnphsgtFarmqlfvrceveafafkkwggeegldeewqrreegkahr >5ld2_B:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF RECBCD+DNA COMPLEX REVEALING ACTIVATED NUCLEASE DOMAIN organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(X69) DT(X68) DA(X67) DT(X1) DT(X2) DT(X3) DT(X4) DT(X5) DT(X6) DT(X7) DT(X8) DT(X9) DT(X10) DT(X11) DT(X12) DT(X13):DA(X67) DC(X14):DG(X66) DT(X15):DA(X65) DA(X16):DT(X64) DA(X17):DT(X63) DT(X18):DA(X62) DG(X19):DC(X61) DC(X20):DG(X60) DG(X21):DC(X59) DA(X22):DT(X58) DG(X23):DC(X57) DC(X24):DG(X56) DA(X25):DT(X55) DC(X26):DG(X54) DT(X27):DA(X53) DG(X28):DC(X52) DC(X29):DG(X51) DT(X30):DA(X50) chainB (245) SER249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (248) ILE252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (250) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (404) PHE422 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG559 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (542) SER560 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (743) ARG761 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldalieSsgIdRrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyaFRgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvRSrqeaaqvrdaltlleipsvylsnRdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfRvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqrxxxxxxxxxxxxxxxxxxxxptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag >5ld2_BCD:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF RECBCD+DNA COMPLEX REVEALING ACTIVATED NUCLEASE DOMAIN organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(X69) DT(X68) DA(X67) DT(X1) DT(X2) DT(X3) DT(X4) DT(X5) DT(X6) DT(X7) DT(X8) DT(X9) DT(X10) DT(X11) DT(X12) DT(X13):DA(X67) DC(X14):DG(X66) DT(X15):DA(X65) DA(X16):DT(X64) DA(X17):DT(X63) DT(X18):DA(X62) DG(X19):DC(X61) DC(X20):DG(X60) DG(X21):DC(X59) DA(X22):DT(X58) DG(X23):DC(X57) DC(X24):DG(X56) DA(X25):DT(X55) DC(X26):DG(X54) DT(X27):DA(X53) DG(X28):DC(X52) DC(X29):DG(X51) DT(X30):DA(X50) chainB (245) SER249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (248) ILE252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (250) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (404) PHE422 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG559 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (542) SER560 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (743) ARG761 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (556) LEU556 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (875) LEU875 0 0 0 0 0 0 0 0 0 0 0 0 3 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (878) TYR878 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1078) ASN1078 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1079) MET1079 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1080) MET1080 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1081) VAL1081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 13) LYS14 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) HIS241 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ALA246 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) GLN247 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) PRO248 0 0 0 0 0 0 0 0 3 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) VAL304 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (485) ARG486 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (538) HIS539 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (558) PRO559 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (559) VAL560 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldalieSsgIdRrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyaFRgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvRSrqeaaqvrdaltlleipsvylsnRdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfRvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqrxxxxxxxxxxxxxxxxxxxxptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag/mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgLiaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfilegLsrYqinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegNMMVrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq/klqkqlleavehKqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlenneashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlHrllgAQPgsqrlrhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasVeagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiaRndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvHksqgsefdhaalilpsqrtPVvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss >5lej_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) DNA sequence DT(C-15):DA(D15) DT(C-14):DA(D14) DG(C-13):DC(D13) DA(C-12):DT(D12) DG(C-11):DC(D11) DG(C-10):DC(D10) DC(C-9):DG(D9) DA(C-8):DT(D8) DT(C-7):DA(D7) DT(C-6):DA(D6) DA(C-5):DT(D5) DA(C-4):DT(D4) DC(C-3):DG(D3) DA(C-2):DT(D2) DT(C-1):DA(D1) DT(C1):DA(D-1) DT(C2):DA(D-2) DG(C3):DC(D-3) DT(C4):DA(D-4) DT(C5):DA(D-5) DA(C6):DT(D-6) DA(C7):DT(D-7) DC(C8):DG(D-8) DG(C9):DC(D-9) DA(C10):DT(D-10) DC(C11):DG(D-11) DG(C12):DC(D-12) DA(C13):DT(D-13) DT(C14):DA(D-14) DA(C15):DT(D-15) chainA (181) HIS182 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 5 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 5 10 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >5lej_AB:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) DNA sequence DT(C-15):DA(D15) DT(C-14):DA(D14) DG(C-13):DC(D13) DA(C-12):DT(D12) DG(C-11):DC(D11) DG(C-10):DC(D10) DC(C-9):DG(D9) DA(C-8):DT(D8) DT(C-7):DA(D7) DT(C-6):DA(D6) DA(C-5):DT(D5) DA(C-4):DT(D4) DC(C-3):DG(D3) DA(C-2):DT(D2) DT(C-1):DA(D1) DT(C1):DA(D-1) DT(C2):DA(D-2) DG(C3):DC(D-3) DT(C4):DA(D-4) DT(C5):DA(D-5) DA(C6):DT(D-6) DA(C7):DT(D-7) DC(C8):DG(D-8) DG(C9):DC(D-9) DA(C10):DT(D-10) DC(C11):DG(D-11) DG(C12):DC(D-12) DA(C13):DT(D-13) DT(C14):DA(D-14) DA(C15):DT(D-15) chainA (181) HIS182 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 5 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 5 10 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (182) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 (184) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 3 0 0 0 0 0 0 0 0 0 (185) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (187) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 (188) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 7 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln/mnaqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >5lek_AB:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA-G145S MUTANT FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) DNA sequence DT(C-15):DA(D15) DT(C-14):DA(D14) DG(C-13):DC(D13) DA(C-12):DT(D12) DG(C-11):DC(D11) DG(C-10):DC(D10) DC(C-9):DG(D9) DA(C-8):DT(D8) DT(C-7):DA(D7) DT(C-6):DA(D6) DA(C-5):DT(D5) DA(C-4):DT(D4) DC(C-3):DG(D3) DA(C-2):DT(D2) DT(C-1):DA(D1) DT(C1):DA(D-1) DT(C2):DA(D-2) DG(C3):DC(D-3) DT(C4):DA(D-4) DT(C5):DA(D-5) DA(C6):DT(D-6) DA(C7):DT(D-7) DC(C8):DG(D-8) DG(C9):DC(D-9) DA(C10):DT(D-10) DC(C11):DG(D-11) DG(C12):DC(D-12) DA(C13):DT(D-13) DT(C14):DA(D-14) DA(C15):DT(D-15) chainA (181) HIS182 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 4 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 5 10 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 2 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicsqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln/naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicsqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >5lek_B:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA-G145S MUTANT FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) / Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) DNA sequence DT(C-15):DA(D15) DT(C-14):DA(D14) DG(C-13):DC(D13) DA(C-12):DT(D12) DG(C-11):DC(D11) DG(C-10):DC(D10) DC(C-9):DG(D9) DA(C-8):DT(D8) DT(C-7):DA(D7) DT(C-6):DA(D6) DA(C-5):DT(D5) DA(C-4):DT(D4) DC(C-3):DG(D3) DA(C-2):DT(D2) DT(C-1):DA(D1) DT(C1):DA(D-1) DT(C2):DA(D-2) DG(C3):DC(D-3) DT(C4):DA(D-4) DT(C5):DA(D-5) DA(C6):DT(D-6) DA(C7):DT(D-7) DC(C8):DG(D-8) DG(C9):DC(D-9) DA(C10):DT(D-10) DC(C11):DG(D-11) DG(C12):DC(D-12) DA(C13):DT(D-13) DT(C14):DA(D-14) DA(C15):DT(D-15) chainB (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 2 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicsqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >5lgy_A:p53-like_transcription_factors; title=LYSINE 120-ACETYLATED P53 DNA BINDING DOMAIN IN A COMPLEX WITH THE BAX RESPONSE ELEMENT. organism=Homo sapiens DNA sequence DT(E1):DA(F21) DC(E2):DG(F20) DA(E3):DT(F19) DC(E4):DG(F18) DA(E5):DT(F17) DA(E6):DT(F16) DG(E7):DC(F15) DT(E8):DA(F14) DT(E9):DA(F13) DA(E10):DT(F12) DG(E11):DC(F11) DA(E12):DT(F10) DG(E13):DC(F9) DA(E14):DT(F8) DC(E15):DG(F7) DA(E16):DT(F6) DA(E17):DT(F5) DG(E18):DC(F4) DC(E19):DG(F3) DC(E20):DG(F2) DT(E21):DA(F1) chainA (181) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (185) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 prot.sequence ssvpsqktyqgsygfrlgflhsgtasvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk >5lgy_ABCD: title=LYSINE 120-ACETYLATED P53 DNA BINDING DOMAIN IN A COMPLEX WITH THE BAX RESPONSE ELEMENT. organism=Homo sapiens DNA sequence DT(E1):DA(F21) DC(E2):DG(F20) DA(E3):DT(F19) DC(E4):DG(F18) DA(E5):DT(F17) DA(E6):DT(F16) DG(E7):DC(F15) DT(E8):DA(F14) DT(E9):DA(F13) DA(E10):DT(F12) DG(E11):DC(F11) DA(E12):DT(F10) DG(E13):DC(F9) DA(E14):DT(F8) DC(E15):DG(F7) DA(E16):DT(F6) DA(E17):DT(F5) DG(E18):DC(F4) DC(E19):DG(F3) DC(E20):DG(F2) DT(E21):DA(F1) chainA (181) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (185) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 chainB (182) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (183) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (186) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 chainC (181) ALA276 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ASP281 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (181) ALA276 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) CYS277 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssvpsqktyqgsygfrlgflhsgtasvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk/sssvpsqktyqgsygfrlgflhsgtasvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk/ssvpsqktyqgsygfrlgflhsgtasvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRDrrteeenlrk/ssvpsqktyqgsygfrlgflhsgtasvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk >5lrs_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH GLUTATHIONE AND A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes DNA sequence DT(D-15):DA(C15) DA(D-14):DT(C14) DT(D-13):DA(C13) DC(D-12):DG(C12) DG(D-11):DC(C11) DT(D-10):DA(C10) DC(D-9):DG(C9) DG(D-8):DC(C8) DT(D-7):DA(C7) DT(D-6):DA(C6) DA(D-5):DT(C5) DA(D-4):DT(C4) DC(D-3):DG(C3) DA(D-2):DT(C2) DA(D-1):DT(C1) DA(D1):DT(C-1) DT(D2):DA(C-2) DG(D3):DC(C-3) DT(D4):DA(C-4) DT(D5):DA(C-5) DA(D6):DT(C-6) DA(D7):DT(C-7) DT(D8):DA(C-8) DG(D9):DC(C-9) DC(D10):DG(C-10) DC(D11):DG(C-11) DT(D12):DA(C-12) DC(D13):DG(C-13) DA(D14):DT(C-14) DA(D15):DT(C-15) chainA (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 4 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 10 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >5lrs_AB:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH GLUTATHIONE AND A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes DNA sequence DT(C-15):DA(D15) DT(C-14):DA(D14) DG(C-13):DC(D13) DA(C-12):DT(D12) DG(C-11):DC(D11) DG(C-10):DC(D10) DC(C-9):DG(D9) DA(C-8):DT(D8) DT(C-7):DA(D7) DT(C-6):DA(D6) DA(C-5):DT(D5) DA(C-4):DT(D4) DC(C-3):DG(D3) DA(C-2):DT(D2) DT(C-1):DA(D1) DT(C1):DA(D-1) DT(C2):DA(D-2) DG(C3):DC(D-3) DT(C4):DA(D-4) DT(C5):DA(D-5) DA(C6):DT(D-6) DA(C7):DT(D-7) DC(C8):DG(D-8) DG(C9):DC(D-9) DA(C10):DT(D-10) DC(C11):DG(D-11) DG(C12):DC(D-12) DA(C13):DT(D-13) DT(C14):DA(D-14) DA(C15):DT(D-15) chainA (181) HIS182 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 4 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 4 10 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 2 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 11 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln/naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >5lty_K:Homeodomain-like; title=HOMEOBOX TRANSCRIPTION FACTOR CDX2 BOUND TO METHYLATED DNA organism=Homo sapiens DNA sequence DG(F19):DC(A18) DG(F20):DC(A17) DA(F21):DT(A16) DG(F22):DC(A15) DG(F23):DC(A14) DT(F24):DA(A13) 5CM(F25):DG(A12) DG(F26):5CM(A11) DT(F27):DA(A10) DA(F28):DT(A9) DA(F29):DT(A8) DA(F30):DT(A7) DA(F31):DT(A6) DC(F32):DG(A5) DA(F33):DT(A4) DC(F34):DG(A3) DA(F35):DT(A2) DA(F36):DT(A1) chainK ( 5) TYR189 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 ( 6) ARG190 0 0 0 0 0 0 0 0 0 7 12 8 0 0 0 0 0 0 ( 48) ILE232 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 ( 51) GLN235 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ASN236 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 prot.sequence tkdkYRvvytdhqrlelekefhysryitirrkaelaatlglserqvkIwfQNrrakerkinkkklqqqqqq >5lux_K:Homeodomain-like; title=HOMEOBOX TRANSCRIPTION FACTOR CDX1 BOUND TO METHYLATED DNA organism=Homo sapiens DNA sequence DG(F20):DC(A17) DA(F21):DT(A16) DG(F22):DC(A15) DG(F23):DC(A14) DT(F24):DA(A13) 5CM(F25):DG(A12) DG(F26):5CM(A11) DT(F27):DA(A10) DA(F28):DT(A9) DA(F29):DT(A8) DA(F30):DT(A7) DA(F31):DT(A6) DC(F32):DG(A5) DA(F33):DT(A4) DC(F34):DG(A3) DA(F35):DT(A2) DA(F36):DT(A1) chainK ( 5) TYR157 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 ( 6) ARG158 0 0 0 0 0 0 0 0 6 10 8 0 0 0 0 0 0 ( 48) ILE200 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 51) GLN203 0 0 0 0 5 1 1 0 0 0 0 0 0 0 0 0 0 ( 52) ASN204 0 0 0 0 0 0 0 12 12 0 0 0 0 0 0 0 0 ( 55) ALA207 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tkdkYRvvytdhqrlelekefhysryitirrkselaanlglterqvkIwfQNrrakerkvnkk >5lxu_A:Homeodomain-like; title=STRUCTURE OF THE DNA-BINDING DOMAIN OF LUX ARRHYTHMO organism=Arabidopsis thaliana DNA sequence DT(U2):DA(B29) DG(U3):DC(B28) DC(U4):DG(B27) DG(U5):DC(B26) DT(U6):DA(B25) DA(U7):DT(B24) DT(U8):DA(B23) DC(U9):DG(B22) DT(U10):DA(B21) chainA ( 3) ARG146 0 0 0 0 0 0 0 0 5 ( 42) ARG185 0 0 6 0 0 0 0 0 0 ( 43) GLU186 0 0 0 0 0 1 0 0 0 ( 47) SER190 0 0 0 0 0 0 6 5 0 ( 50) GLN193 0 0 0 0 13 11 2 0 0 ( 51) LYS194 0 0 0 0 0 0 2 11 3 prot.sequence rpRlvwtpqlhkrfvdvvahlgiknavpktimqlmnvegltREnvaShlQKyrlylk >5m0r_AI:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=CRYO-EM RECONSTRUCTION OF THE MAEDI-VISNA VIRUS (MVV) STRAND TRANSFER COMPLEX organism=MAEDI VISNA VIRUS (STRAIN KV1772) / MAEDI VISNA VIRUS (STRAIN KV1772) / MAEDI VISNA VIRUS (STRAIN KV1772) / MAEDI VISNA VIRUS (STRAIN KV1772) DNA sequence DA(U5):DT(R43) DA(U6):DT(R40) DA(U7):DT(R39) DC(U8):DG(R38) DT(U9):DA(R37) DT(U10):DA(R36) DG(U11):DC(R35) DA(U12):DT(R34) DT(U13):DA(R33) DT(U14):DA(R32) DA(U15):DT(R31) DG(U16):DC(R30) DG(U17):DC(R29) DG(U18):DC(R28) DT(U19):DA(R27) DG(U20):DC(R26) DG(T20):DC(R25) DT(T21):DA(R24) DC(T22):DG(R23) DG(T23):DC(R22) DA(T24):DT(R21) DC(T25):DG(R20) DC(T26):DG(V20) DA(T27):DT(V19) DC(T28):DG(V18) DC(T29):DG(V17) DC(T30):DG(V16) DT(T31):DA(V15) DA(T32):DT(V14) DA(T33):DT(V13) DT(T34):DA(V12) DC(T35):DG(V11) DA(T36):DT(V10) DA(T37):DT(V9) DG(T38):DC(V8) DT(T39):DA(V7) DT(T40):DA(V6) DT(T41):DA(V5) chainA ( 69) HIS69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) GLU94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) PRO121 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI ( 69) HIS69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) GLU94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) PRO121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 19 9 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wieniplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkmpstlrgsnkrgidhwqvdytHyedkiilvwvetnsgliyaervkgEtgqefrvqtmkwyamfapkslqsdngPafvaestqllmkylgiehttgipwnpqsqalverthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk/wieniplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkmpstlrgsnkrgidhwqvdytHyedkiilvwvetnsgliyaervkgEtgqefrvqtmkwyamfapkslqsdngPafvaestqllmkylgiehttgipwnpqsqalverthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk >5m0r_FL:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=CRYO-EM RECONSTRUCTION OF THE MAEDI-VISNA VIRUS (MVV) STRAND TRANSFER COMPLEX organism=MAEDI VISNA VIRUS (STRAIN KV1772) / MAEDI VISNA VIRUS (STRAIN KV1772) / MAEDI VISNA VIRUS (STRAIN KV1772) / MAEDI VISNA VIRUS (STRAIN KV1772) DNA sequence DG(S1):DT(T21) DC(S2):DG(T20) DT(S3):DA(T19) DG(S4):DC(T18) DC(S5):DG(T17) DG(S6):DC(T16) DA(S7):DT(T15) DG(S8):DC(T14) DA(S9):DT(T13) DT(S10):DA(T12) DC(S11):DG(T11) DC(S12):DG(T10) DG(S13):DC(T9) DC(S14):DG(T8) DT(S15):DA(T7) DC(S16):DG(T6) DC(S17):DG(T5) DG(S18):DC(T4) DG(S19):DC(T3) DT(S20):DA(T2) DG(S21):DC(T1) chainF (219) ARG231 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) TRP245 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) VAL252 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL (172) ARG231 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkkrgidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkRghpgewqgptqvlWggdgaiVvkdrgtdrylviankdvkfipppkei/idhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkRghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfippp >5m1s_AD:DNA_clamp; title=CRYO-EM STRUCTURE OF THE E. COLI REPLICATIVE DNA POLYMERASE-CLAMP- EXONUCLASE-THETA COMPLEX BOUND TO DNA IN THE EDITING MODE organism=ESCHERICHIA COLI K12 DNA sequence DT(P5):DA(T25) DA(P6):DT(T24) DG(P7):DC(T23) DT(P8):DA(T22) DA(P9):DT(T21) DC(P10):DG(T20) DT(P11):DA(T19) DA(P12):DT(T18) DG(P13):DC(T17) DG(P14):DC(T16) DA(P15):DT(T15) DC(P16):DG(T14) DG(P17):DC(T13) DA(P18):DT(T12) chainA (453) TYR453 0 0 0 0 0 0 0 0 0 0 0 0 0 34 chainD prot.sequence mseprfvhlrvhsdysmidglaktaplvkkaaalgmpalaitdftnlcglvkfygaghgagikpivgadfnvqcdllgdelthltvlaanntgyqnltlliskayqrgygaagpiidrdwlielneglillsggrmgdvgrsllrgnsalvdecvafyeehfpdryflelirtgrpdeesylhaavelaearglpvvatndvrfidssdfdaheirvaihdgftlddpkrprnyspqqymrseeemcelfadipealantveiakrcnvtvrlgeyflpqfptgdmstedylvkrakegleerlaflfpdeeerlkrrpeyderletelqvinqmgfpgyflivmefiqwskdngvpvgpgrgsgagslvayalkitdldplefdllferflnpervsmpdfdvdfcmekrdqviehvadmygrdavsqiitfgtmaakavirdvgrvlghpYgfvdrisklippdpgmtlakafeaepqlpeiyeadeevkalidmarklegvtrnagkhaggvviaptkitdfaplycdeegkhpvtqfdksdveyaglvkfdflglrtltiinwaleminkrrakngeppldiaaiplddkksfdmlqrsettavfqlesrgmkdlikrlqpdcfedmialvalfrpgplqsgmvdnfidrkhgreeisypdvqwqheslkpvleptygiilyqeqvmqiaqvlsgytlggadmlrramgkkkpeemakqrsvfaegaeknginaelamkifdlvekfagygfnkshsaayalvsyqtlwlkahypaefmaavmtadmdntekvvglvdecwrmglkilppdinsglyhfhvnddgeivygigaikgvgegpieaiiearnkggyfrelfdlcartdtkklnrrvleklimsgafdrlgphraalmnslgdalkaadqhakaeaigqldlfgvl/rqivldtettgmnqigahyeghkiieigavevvnrrltgnnfhvylkpdrlvdpeafgvhgiadeflldkptfaevadefmdyirgaelvihnaafdigfmdyefsllkrdipktntfckvtdslavarkmfpgkrnsldalcaryeidnskrtlhgalldaqilaevylamtggqlslplamegetiqrivrqasklrvvfatdeeiaahearldlvqkkggsclwra >5m5x_AB: title=RNA POLYMERASE I ELONGATION COMPLEX 1 organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T1):DT(S38) DG(T3):DT(S37) DT(T4):DA(S35) DC(T5):DG(S34) DA(T6):DT(S33) DA(T7):DT(S32) DG(T8):DC(S31) DT(T9):DA(S30) DA(T10):DT(S29) DC(T11):DG(S28) DT(T12):DA(S27) DT(T13):DA(S26) DA(T14):DA(S25) DC(T15):DG(S24) DG(T16):DA(S13) DC(T17):DT(S12) DC(T18):DG(S11) DT(T19):DA(S10) DG(T20):DT(S9) DG(T21):DC(S8) DT(T22):DA(S7) DC(T23):DT(S6) DA(T24):DG(S5) DT(T25):DA(S4) DT(T26):DC(S3) DA(T27):DG(S2) DC(T28):DG(S1) chainA (302) HIS378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 (395) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (506) GLN592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (507) PRO593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 (927) THR1013 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (928) SER1014 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (1392) ARG1600 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1393) GLN1601 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (430) MET451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (458) GLN479 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (487) PHE508 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (490) GLN511 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) LYS513 0 0 0 0 0 0 0 0 0 0 0 5 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1035) LYS1061 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitlgdisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgfistyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsHensqnqllskvlttsllirdlnddlsklrvifsrlmnafvtiqndvnafidstkaqgrtsgkvpipgvkqalekkeglfrkhmmgkrvnyaaRsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettgarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRQgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/tadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnisnsgylgnklsvsveqvsiakpmsndverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlMrvnenigskmqyflstgnlvsqsgldlQqvsgytvvaekinfyrfishfrmvhrgsFfaQlKtttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlaldpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvKgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk >5m5x_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE I ELONGATION COMPLEX 1 organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T1):DT(S38) DG(T3):DT(S37) DT(T4):DA(S35) DC(T5):DG(S34) DA(T6):DT(S33) DA(T7):DT(S32) DG(T8):DC(S31) DT(T9):DA(S30) DA(T10):DT(S29) DC(T11):DG(S28) DT(T12):DA(S27) DT(T13):DA(S26) DA(T14):DA(S25) DC(T15):DG(S24) DG(T16):DA(S13) DC(T17):DT(S12) DC(T18):DG(S11) DT(T19):DA(S10) DG(T20):DT(S9) DG(T21):DC(S8) DT(T22):DA(S7) DC(T23):DT(S6) DA(T24):DG(S5) DT(T25):DA(S4) DT(T26):DC(S3) DA(T27):DG(S2) DC(T28):DG(S1) chainB (430) MET451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (458) GLN479 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (487) PHE508 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (490) GLN511 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) LYS513 0 0 0 0 0 0 0 0 0 0 0 5 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1035) LYS1061 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence tadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnisnsgylgnklsvsveqvsiakpmsndverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlMrvnenigskmqyflstgnlvsqsgldlQqvsgytvvaekinfyrfishfrmvhrgsFfaQlKtttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlaldpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvKgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk >5mct_A:p53-like_transcription_factors; title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-LHG1) organism=Homo sapiens DNA sequence DG(C1) DG(C2) DG(C3) DC(C4) DT(C6) DG(C7) DC(C8) DC(C9) DC(C10) DG(C11) DG(C12) DG(C13) DC(C14) DT(C16) DG(C17) DC(C18) DC(C19) DC(C20) chainA ( 27) LYS120 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 11 11 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkkg >5mct_AB: title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-LHG1) organism=Homo sapiens DNA sequence DG(C1) DG(C2) DG(C3) DC(C4) DT(C6) DG(C7) DC(C8) DC(C9) DC(C10) DG(C11) DG(C12) DG(C13) DC(C14) DT(C16) DG(C17) DC(C18) DC(C19) DC(C20) chainA ( 27) LYS120 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 11 11 3 0 0 0 0 0 0 0 0 0 0 0 chainB ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 11 11 3 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkkg/sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkkg >5mcu_AB: title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-LHG2) organism=Homo sapiens DNA sequence DG(C1) DG(C2) DG(C3) DC(C4) DT(C6) DG(C7) DC(C8) DC(C9) DC(C10) DG(C11) DG(C12) DG(C13) DC(C14) DT(C16) DG(C17) DC(C18) DC(C19) DC(C20) chainA ( 26) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (182) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (183) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (186) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 3 0 0 chainB ( 26) LYS120 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (182) ALA276 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (183) CYS277 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (186) ARG280 0 0 0 0 10 11 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssvpsqktyqgsygfrlgflhsgaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk/ssvpsqktyqgsygfrlgflhsgaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk >5mcu_B:p53-like_transcription_factors; title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-LHG2) organism=Homo sapiens DNA sequence DG(C1) DG(C2) DG(C3) DC(C4) DT(C6) DG(C7) DC(C8) DC(C9) DC(C10) DG(C11) DG(C12) DG(C13) DC(C14) DT(C16) DG(C17) DC(C18) DC(C19) DC(C20) chainB ( 26) LYS120 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (182) ALA276 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (183) CYS277 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (186) ARG280 0 0 0 0 10 11 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssvpsqktyqgsygfrlgflhsgaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk >5mcv_A:p53-like_transcription_factors; title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-LWC1) organism=Homo sapiens DNA sequence DG(C1) DG(C2) DG(C3) DC(C4) DI(C5) DG(C7) DC(C8) DC(C9) DC(C10) DG(C11) DG(C12) DG(C13) DC(C14) DI(C15) DG(C17) DC(C18) DC(C19) DC(C20) chainA ( 27) LYS120 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkkg >5mcv_AB: title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-LWC1) organism=Homo sapiens DNA sequence DG(C1) DG(C2) DG(C3) DC(C4) DI(C5) DG(C7) DC(C8) DC(C9) DC(C10) DG(C11) DG(C12) DG(C13) DC(C14) DI(C15) DG(C17) DC(C18) DC(C19) DC(C20) chainA ( 27) LYS120 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 chainB ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkkg/sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkkg >5mcw_A:p53-like_transcription_factors; title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-LWC2) organism=Homo sapiens DNA sequence DG(C1) DG(C2) DG(C3) DC(C4) DI(C5) DG(C7) DC(C8) DC(C9) DC(C10) DG(C11) DG(C12) DG(C13) DC(C14) DI(C15) DG(C17) DC(C18) DC(C19) DC(C20) chainA ( 27) LYS120 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkk >5mcw_AB: title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-LWC2) organism=Homo sapiens DNA sequence DG(C1) DG(C2) DG(C3) DC(C4) DI(C5) DG(C7) DC(C8) DC(C9) DC(C10) DG(C11) DG(C12) DG(C13) DC(C14) DI(C15) DG(C17) DC(C18) DC(C19) DC(C20) chainA ( 27) LYS120 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 chainB ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkk/sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkk >5mey_A:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD4-MH1 BOUND TO THE GGCGC SITE. organism=Homo sapiens DNA sequence DA(D1) DT(D2) DG(D3) DC(D4) DG(D5) DG(D6) DG(D7) DC(D8) DG(D9) DC(D10) DG(D11) DC(D12) DC(D13) DC(D14) DG(D15) DC(D16) DA(D17) DT(D18) chainA ( 69) GLN83 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 ( 74) LYS88 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 prot.sequence aclsivhslmchrqggesetfakraieslvkklkekkdeldslitaittngahpskcvtiqrtlDgrlQvagrKgfphviyarlwrwpdlhknelkhvkycqyafdlkcdsvcvnpyhyervvs >5mez_A:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD4-MH1 BOUND TO THE GGCT SITE. organism=Homo sapiens DNA sequence DG(E2):DC(D15) DC(E3):DG(D14) DA(E4):DT(D13) DG(E5):DC(D12) DG(E6):DC(D11) DC(E7):DG(D10) DT(E8):DA(D9) DA(E9):DT(D8) DG(E10):DC(D7) DC(E11):DG(D6) DC(E12):DG(D5) DT(E13):DA(D4) DG(E14):DC(D3) DC(E15):DG(D2) chainA ( 67) ARG81 0 0 2 8 1 0 0 0 0 0 0 0 0 0 ( 69) GLN83 0 0 0 0 0 2 8 5 0 0 0 0 0 0 ( 74) LYS88 0 0 0 1 5 9 6 0 0 0 0 0 0 0 prot.sequence aclsivhslmchrqggesetfakraieslvkklkekkdeldslitaittngahpskcvtiqrtldgRlQvagrKgfphviyarlwrwpdlhknelkhvkycqyafdlkcdsvcvnpyhyervvsp >5mf0_A:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD4-MH1 BOUND TO THE GGCCG SITE. organism=Homo sapiens DNA sequence DA(F1):DT(E16) DC(F2):DG(E15) DG(F3):DC(E14) DG(F4):DC(E13) DG(F5):DC(E12) DC(F6):DG(E11) DC(F7):DG(E10) DG(F8):DC(E9) DC(F9):DG(E8) DG(F10):DC(E7) DG(F11):DC(E6) DC(F12):DG(E5) DC(F13):DG(E4) DC(F14):DG(E3) DG(F15):DC(E2) DT(F16):DA(E1) chainA ( 64) ASP79 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG81 0 6 6 1 1 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLN83 0 0 0 0 0 3 8 8 0 0 0 0 0 0 0 0 ( 73) LYS88 0 0 0 1 6 7 1 0 0 0 0 0 0 0 0 0 prot.sequence clsivhslmchrqggesetfakraieslvkklkekkdeldslitaittngahpskcvtiqrtlDgRlQvagrKgfphviyarlwrwpdlhknelkhvkycqyafdlkcdsvcvnpyhyervvs >5mf7_AB: title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-GADD45) organism=Homo sapiens DNA sequence DG(C1) DA(C2) DA(C3) DC(C4) DA(C5) DT(C6) DG(C7) DT(C8) DC(C9) DT(C10) DA(C11) DA(C12) DG(C13) DC(C14) DA(C15) DT(C16) DG(C17) DC(C18) DT(C19) DG(C20) chainA (175) ARG280 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (175) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphherclappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkkg/sssvpsqktyqgsygfrlgflvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphherclappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkkg >5mf7_B:p53-like_transcription_factors; title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-GADD45) organism=Homo sapiens DNA sequence DG(C1) DA(C2) DA(C3) DC(C4) DA(C5) DT(C6) DG(C7) DT(C8) DC(C9) DT(C10) DA(C11) DA(C12) DG(C13) DC(C14) DA(C15) DT(C16) DG(C17) DC(C18) DT(C19) DG(C20) chainB (175) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphherclappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkkg >5mg7_A:p53-like_transcription_factors; title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-P53R2) organism=Homo sapiens DNA sequence DT(C1) DG(C2) DA(C3) DC(C4) DA(C5) DT(C6) DG(C7) DC(C8) DC(C9) DC(C10) DA(C11) DG(C12) DG(C13) DC(C14) DA(C15) DT(C16) DG(C17) DT(C18) DC(C19) DT(C20) chainA ( 27) LYS120 3 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER121 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG280 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkkg >5mg7_AB: title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-P53R2) organism=Homo sapiens DNA sequence DT(C1) DG(C2) DA(C3) DC(C4) DA(C5) DT(C6) DG(C7) DC(C8) DC(C9) DC(C10) DA(C11) DG(C12) DG(C13) DC(C14) DA(C15) DT(C16) DG(C17) DT(C18) DC(C19) DT(C20) chainA ( 27) LYS120 3 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER121 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG280 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 3 8 5 0 0 0 0 0 0 0 (186) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkkg/sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkkg >5mga_A: title=STRUCTURE OF THE CPF1 ENDONUCLEASE R-LOOP COMPLEX AFTER DNA CLEAVAGE organism=Francisella tularensis subsp. novicida U112 DNA sequence DC(D-5):DG(C5) DG(D-4):DC(C4) DT(D-3):DA(C3) DT(D-2):DA(C2) DA(D-1):DT(C1) chainA (175) THR177 0 3 1 0 0 (178) LYS180 0 0 3 0 0 (540) LYS613 0 0 9 3 0 (543) ASP616 1 0 0 0 0 (590) PRO663 0 0 0 0 1 (594) LYS667 0 0 0 0 22 (595) MET668 0 0 0 3 2 (598) LYS671 0 2 6 8 4 (754) GLU827 0 0 0 0 1 prot.sequence iyqefvnkyslsktlrfelipqgktlenikarglilddekrakdykkakqiidkyhqffieeilssvcisedllqnysdvyfklkksdddnlqkdfksakdtikkqiseyikdsekfknlfnqnlidakkgqesdlilwlkqskdngielfkansditdidealeiiksfkgwtTyfKgfhenrknvyssndiptsiiyrivddnlpkflenkakyeslkdkapyeqikkdlaeeltfdddyknqrvfsldevfeianfnnylnqsgitkfntiiggkfvngentkrkgineyinlysqndktlkkykmsvlfkqilsdtesksfvidkleddsdvvttmqsfyeqiaafktketlsllfddlkksltdlsqqvfddykeqeliakktekakylsletilidkqcrfeeilanfaaipmifdeiaqnkdnlaqisikyqnqgkkdllqasaeddvkaikdlldqtnnllhklkifhisqsedkadehfylvfeecyfelanivplynkirnyitqkpysdekfklnfenstlangwdknKepDntailfikddkyylgvmnkknnkifddkaikenkgegykkivykllPganKMlpKvffsaksikfynpsedilrirnhsthtkngspqkgyekfefniedcrkfidfykqsiskhpewkdfgfrfsdtqrynsidefyrevenqgykltfenisesyidsvvnqgklylfqiynkdfsayskgrpnlhtlywkalfdernlqdvvyklngEaelfyrkqsipkkiianknkdnpkkesvfeydlikdkrftedkfffhcpitinfkssgankfndeinlllkekandvhilsidrgerhlayytlvdgkgniikqdtfniignyhdklaaiekdrdsarkdwkkinnikemkegylsqvvheiaklvieynaivvfedlnfgvekqvyqklekmlieklnylvfkdnefdktggvlrayqltapfetfkkmgkqtgiiyyvpagftskicpvtgfvnqlypvsksqeffskfdkicynldkgyfefsfdyknfgdkgkwtiasfgsrlinnhnwdtrevyptkelekllkdygecikaicgesdkkffakltsvlntilqmrnskeldylispvadvngnffdsrqapknmpqdadangayhiglkglmllgriknnqeklnlvikneeyfefvqnrnn >5mhj_A: title=ICP4 DNA-BINDING DOMAIN, LACKING INTRINSICALLY DISORDERED REGION, IN COMPLEX WITH 12MER DNA DUPLEX FROM ITS OWN PROMOTER organism=Human herpesvirus 1 (strain 17) / Human herpesvirus 1 (strain 17) DNA sequence DC(E2):DG(F38) DG(E3):DC(F37) DA(E4):DT(F36) DT(E5):DA(F35) DC(E6):DG(F34) DG(E7):DC(F33) DT(E8):DA(F32) DC(E9):DG(F31) chainA (126) SER418 0 0 0 5 5 0 0 0 (127) SER419 0 0 1 0 0 0 0 0 (164) ARG456 0 0 0 0 13 10 7 0 (165) ARG457 0 0 0 1 0 0 0 0 prot.sequence ldadatsgafyaryrdgyvsgepwpgagppppgrvlygglgdsrpglwgapeaeearrrfeasgapaavwapelgdaaqqyalitrllytpdaeamgwlqnprvvpgdvaldqacfrisgaarnsSSfitgsvaravphlgyamaagrfgwglahaaaavamsRRydraqkgflltslrrayapllarenaalt >5mhj_AB: title=ICP4 DNA-BINDING DOMAIN, LACKING INTRINSICALLY DISORDERED REGION, IN COMPLEX WITH 12MER DNA DUPLEX FROM ITS OWN PROMOTER organism=Human herpesvirus 1 (strain 17) / Human herpesvirus 1 (strain 17) / Human herpesvirus 1 (strain 17) / Human herpesvirus 1 (strain 17) DNA sequence DC(E2):DG(F38) DG(E3):DC(F37) DA(E4):DT(F36) DT(E5):DA(F35) DC(E6):DG(F34) DG(E7):DC(F33) DT(E8):DA(F32) DC(E9):DG(F31) chainA (126) SER418 0 0 0 5 5 0 0 0 (127) SER419 0 0 1 0 0 0 0 0 (164) ARG456 0 0 0 0 13 10 7 0 (165) ARG457 0 0 0 1 0 0 0 0 chainB (120) PHE420 0 0 0 0 0 0 3 0 (156) ARG456 0 5 9 9 0 0 0 0 prot.sequence ldadatsgafyaryrdgyvsgepwpgagppppgrvlygglgdsrpglwgapeaeearrrfeasgapaavwapelgdaaqqyalitrllytpdaeamgwlqnprvvpgdvaldqacfrisgaarnsSSfitgsvaravphlgyamaagrfgwglahaaaavamsRRydraqkgflltslrrayapllarenaalt/dadatsgafyaryrdgyvsgepwpgagppppgrvlygglgdsrpglwgapeaeearrrfeasgapaavwapelgdaaqqyalitrllytpdaeamgwlqnprvvpgdvaldqacfrissFitgsvaravphlgyamaagrfgwglahaaaavamsRrydraqkgflltslrrayapllarenaaltg >5mhk_AB: title=ICP4 DNA-BINDING DOMAIN IN COMPLEX WITH 19MER DNA DUPLEX FROM ITS OWN PROMOTER organism=HUMAN HERPESVIRUS 1 DNA sequence DC(F1):DG(E39) DC(F2):DG(E38) DG(F3):DC(E37) DA(F4):DT(E36) DT(F5):DA(E35) DC(F6):DG(E34) DG(F7):DC(E33) DT(F8):DA(E32) DC(F9):DG(E31) DC(F10):DG(E30) DA(F11):DT(E29) DC(F12):DG(E28) DA(F13):DT(E27) DC(F14):DG(E26) DG(F15):DC(E25) chainA ( 94) ASN393 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (119) SER418 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 (120) SER419 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (157) ARG456 0 0 0 0 0 18 14 9 0 0 0 0 0 0 0 (158) ARG457 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainB (131) SER419 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 (168) ARG456 0 0 1 11 10 0 0 0 0 0 0 0 0 0 0 prot.sequence gafyaryrdgyvsgepwpgagppppgrvlygglgdsrpglwgapeaeearrrfeasgapaavwapelgdaaqqyalitrllytpdaeamgwlqNprvvpgdvaldqacfrisgaarnsSSfitgsvaravphlgyamaagrfgwglahaaaavamsRRydraqkgflltslrrayapllarenaal/qprrveldadatsgafyaryrdgyvsgepwpgagppppgrvlygglgdsrpglwgapeaeearrrfeasgapaavwapelgdaaqqyalitrllytpdaeamgwlqnprvvpgdvaldqacfrisgaarnSfitgsvaravphlgyamaagrfgwglahaaaavamsRrydraqkgflltslrrayapllarenaal >5mhk_C: title=ICP4 DNA-BINDING DOMAIN IN COMPLEX WITH 19MER DNA DUPLEX FROM ITS OWN PROMOTER organism=? DNA sequence DC(G22):DG(H18) DT(G23):DA(H17) DC(G24):DG(H16) DC(G25):DG(H15) DG(G26):DC(H14) DT(G27):DA(H13) DG(G28):DC(H12) DT(G29):DA(H11) DG(G30):DC(H10) DG(G31):DC(H9) DA(G32):DT(H8) DC(G33):DG(H7) DG(G34):DC(H6) DA(G35):DT(H5) DT(G36):DA(H4) DC(G37):DG(H3) DG(G38):DC(H2) DG(G39):DC(H1) chainC (102) ASN393 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (104) ARG395 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (127) SER418 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 (165) ARG456 0 0 0 0 0 0 0 0 0 0 7 10 15 0 0 0 0 0 (166) ARG457 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence eldadatsgafyaryrdgyvsgepwpgagppppgrvlygglgdsrpglwgapeaeearrrfeasgapaavwapelgdaaqqyalitrllytpdaeamgwlqNpRvvpgdvaldqacfrisgaarnSSsfitgsvaravphlgyamaagrfgwglahaaaavamsRRydraqkgflltslrrayapllarenaalt >5mht_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH HEMIMETHYLATED DNA AND ADOHCY organism=HAEMOPHILUS HAEMOLYTICUS DNA sequence DC(C402):DG(D433) DC(C403):DG(D432) DA(C404):DT(D431) DT(C405):DA(D430) DG(C406):DC(D429) 5CM(C407):DG(D428) DG(C408):DC(D427) DC(C409):DG(D426) DT(C410):DA(D425) DG(C411):DC(D424) DA(C412):DT(D423) DC(C413):DG(D422) chainA ( 81) CYS81 0 0 0 0 0 0 8 0 0 0 0 0 ( 86) ILE86 0 0 0 0 0 0 0 1 2 1 0 0 ( 87) SER87 0 0 0 0 0 16 0 7 0 0 0 0 (119) GLU119 0 0 0 0 0 0 11 0 0 0 0 0 (120) ASN120 0 0 0 0 0 0 1 0 0 0 0 0 (121) VAL121 0 0 0 0 0 0 3 0 0 0 0 0 (163) ARG163 0 0 0 0 0 0 3 0 0 0 0 0 (165) ARG165 0 0 0 0 0 0 9 0 0 0 0 0 (237) GLN237 0 0 0 0 0 38 16 24 0 0 0 0 (239) GLU239 0 0 0 0 0 8 0 0 0 0 0 0 (240) ARG240 0 0 0 0 0 0 1 7 7 0 0 0 (260) ALA260 0 0 0 1 0 0 0 0 0 0 0 0 (261) LYS261 0 0 0 1 0 0 0 0 0 0 0 0 (304) ASN304 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpCqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmENVknfashdngntlevvkntmneldysfhakvlnaldygipqkReRiymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvrlgivgkggQgeRiystrgiaitlsaygggifAKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgNsvvinvlqyiaynigsslnfkpy >5mlu_ABCDEFGH:Histone-fold; title=CRYSTAL STRUCTURE OF THE PFV GAG CBS BOUND TO A MONONUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 1) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence hRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rKVlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/tRSsraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRKesyaiyvykvlkqvhpdtgisskAmsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/HRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrlLrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/ktrkesyaiyvykvlkqvhpDtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5mlu_F:Histone-fold; title=CRYSTAL STRUCTURE OF THE PFV GAG CBS BOUND TO A MONONUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >5mma_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI XZ379 (COMPOUND 5'G) organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (104) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (106) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (207) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (213) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (214) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 11 8 3 (251) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence daeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >5mmb_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI XZ434 (COMPOUND 6P) organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (104) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (106) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (207) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (213) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (214) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 12 8 3 (251) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence daeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknSdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >5mpf_AB: title=STRUCTURAL BASIS OF GENE REGULATION BY THE GRAINYHEAD TRANSCRIPTION FACTOR SUPERFAMILY organism=Homo sapiens DNA sequence DA(F1):DT(E12) DA(F2):DT(E11) DA(F3):DT(E10) DA(F4):DT(E9) DC(F5):DG(E8) DC(F6):DG(E7) DG(F7):DC(E6) DG(F8):DC(E5) DT(F9):DA(E4) DT(F10):DA(E3) DT(F11):DA(E2) DT(F12):DA(E1) chainA (155) ASP422 0 0 1 1 0 0 0 0 0 0 0 0 (160) ARG427 0 0 0 4 10 14 0 0 0 0 0 0 (163) ARG430 0 5 2 0 0 0 0 0 0 0 0 0 chainB (161) ASP422 0 0 0 0 0 0 0 0 1 1 0 0 (166) ARG427 0 0 0 0 0 0 14 10 5 0 0 0 (169) ARG430 0 0 0 0 0 0 0 0 0 3 5 0 prot.sequence nnfeytleaskslrgdstmtylnkgqfypitlkevskvrsvimvvfaedksredqlrhwkywhsrqhtakqrcidiadykesfntisnveeiaynaisftwdindeakvfisvnclstdfssqkgvkglplniqidtynnkpvhraycqikvfcDkgaeRkiRdeerkqskrmditvfkpfidldtqpvlfipdvh/nnfeytleaskslrqkstmtylnkgqfypitlkevsskvrsvimvvfaedksredqlrhwkywhsrqhtakqrcidiadykesfntisnveeiaynaisftwdindeakvfisvnclstdfssqkgvkglplniqidtysynnrsnkpvhraycqikvfcDkgaeRkiRdeerkqskrkmditvfkpfidldtqpvlfipdv >5mpf_B: title=STRUCTURAL BASIS OF GENE REGULATION BY THE GRAINYHEAD TRANSCRIPTION FACTOR SUPERFAMILY organism=Homo sapiens DNA sequence DA(E1):DT(F12) DA(E2):DT(F11) DA(E3):DT(F10) DA(E4):DT(F9) DC(E5):DG(F8) DC(E6):DG(F7) DG(E7):DC(F6) DG(E8):DC(F5) DT(E9):DA(F4) DT(E10):DA(F3) DT(E11):DA(F2) DT(E12):DA(F1) chainB (161) ASP422 0 0 1 1 0 0 0 0 0 0 0 0 (166) ARG427 0 0 0 5 10 14 0 0 0 0 0 0 (169) ARG430 0 5 3 0 0 0 0 0 0 0 0 0 prot.sequence nnfeytleaskslrqkstmtylnkgqfypitlkevsskvrsvimvvfaedksredqlrhwkywhsrqhtakqrcidiadykesfntisnveeiaynaisftwdindeakvfisvnclstdfssqkgvkglplniqidtysynnrsnkpvhraycqikvfcDkgaeRkiRdeerkqskrkmditvfkpfidldtqpvlfipdv >5ms0_CDF: title=PSEUDO-ATOMIC MODEL OF THE RNA POLYMERASE LAMBDA-BASED ANTITERMINATION COMPLEX SOLVED BY CRYO-EM organism=ESCHERICHIA COLI K-12 DNA sequence DT(J13):DT(I39) DT(J14):DT(I38) DA(J15):DC(I37) DA(J16):DG(I36) DG(J17):DA(I35) DC(J18):DG(I34) DC(J19):DT(I33) DT(J20):DT(I32) DG(J21):DC(I31) DG(J22):DA(I30) DT(J23):DT(I29) DC(J24):DG(I28) DA(J25):DA(I27) DT(J26):DA(I26) DT(J27):DA(I13) DA(J28):DT(I12) DC(J29):DG(I11) DT(J30):DA(I10) DA(J31):DT(I9) DG(J32):DC(I8) DT(J33):DA(I7) DA(J34):DT(I6) DC(J35):DG(I5) DT(J36):DA(I4) DG(J37):DC(I3) DC(J38):DG(I2) DC(J39):DG(I1) chainC chainD (306) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (413) ALA426 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (764) LYS789 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (765) THR790 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (768) SER793 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (903) THR928 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF prot.sequence kkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlretasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaaelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmvqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/teefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtevsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalKTanSgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgTqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraageapaapqvtaeda/mseapkkrwyvvqafsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqveka >5n2q_A: title=MOBM RELAXASE DOMAIN (MOBV; MOB_PRE) BOUND TO 26NT PMV158 ORIT DNA organism=STREPTOCOCCUS AGALACTIAE DNA sequence DA(B1):DT(B18) DC(B2):DG(B17) DT(B3):DA(B16) DT(B4):DA(B15) DT(B5):DA(B14) DA(B6):DT(B13) DT(B7):DA(B12) chainA ( 9) LYS10 1 0 0 0 0 0 0 ( 52) ARG71 0 0 0 0 1 12 3 ( 55) ARG74 0 1 7 6 0 0 0 (130) LYS149 5 11 8 0 0 0 0 prot.sequence symvarmqKmkagnlggafkhnenyeltdrdrsvsyekqikdyvnenkvsnRaiRkdavlcdewiitsdkdffekldeeqtrtffetaknyfaenygesniayasvhldestphmhmgvvpfengklssKamfdreelkhiqedlprymsdhgfelergklnseakhktvaefk >5n6i_AD: title=CRYSTAL STRUCTURE OF MOUSE CGAS IN COMPLEX WITH 39 BP DNA organism=Mus musculus DNA sequence DG(G2):DC(H38) DA(G3):DT(H37) DT(G4):DA(H36) DC(G5):DG(H35) DT(G6):DA(H34) DA(G7):DT(H33) DC(G8):DG(H32) DT(G9):DA(H31) DA(G10):DT(H30) DG(G11):DC(H29) DT(G12):DA(H28) DG(G13):DC(H27) DA(G14):DT(H26) DT(G15):DA(H25) DC(G16):DG(H24) DT(G17):DA(H23) DA(G18):DT(H22) DT(G19):DA(H21) DG(G20):DC(H20) DA(G21):DT(H19) DC(G22):DG(H18) DT(G23):DA(H17) DG(G24):DC(H16) DA(G25):DT(H15) DT(G26):DA(H14) DC(G27):DG(H13) DT(G28):DA(H12) DG(G29):DC(H11) DT(G30):DA(H10) DA(G31):DT(H9) DC(G32):DG(H8) DA(G33):DT(H7) DT(G34):DA(H6) DG(G35):DC(H5) DA(G36):DT(H4) DT(G37):DA(H3) chainA ( 13) ARG161 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 13) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 6 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkriprgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifd/klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkriprgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifd >5n6i_BC: title=CRYSTAL STRUCTURE OF MOUSE CGAS IN COMPLEX WITH 39 BP DNA organism=Mus musculus DNA sequence DA(J3):DT(I37) DT(J4):DA(I36) DC(J5):DG(I35) DA(J6):DT(I34) DT(J7):DA(I33) DG(J8):DC(I32) DT(J9):DA(I31) DA(J10):DT(I30) DC(J11):DG(I29) DA(J12):DT(I28) DG(J13):DC(I27) DA(J14):DT(I26) DT(J15):DA(I25) DC(J16):DG(I24) DA(J17):DT(I23) DG(J18):DC(I22) DT(J19):DA(I21) DC(J20):DG(I20) DA(J21):DT(I19) DT(J22):DA(I18) DA(J23):DT(I17) DG(J24):DC(I16) DA(J25):DT(I15) DT(J26):DA(I14) DC(J27):DG(I13) DA(J28):DT(I12) DC(J29):DG(I11) DT(J30):DA(I10) DA(J31):DT(I9) DG(J32):DC(I8) DT(J33):DA(I7) DA(J34):DT(I6) DG(J35):DC(I5) DA(J36):DT(I4) DT(J37):DA(I3) DC(J38):DG(I2) chainB ( 13) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 6 0 0 0 0 chainC ( 13) ARG161 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkriprgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifd/klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkriprgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifd >5n6i_D: title=CRYSTAL STRUCTURE OF MOUSE CGAS IN COMPLEX WITH 39 BP DNA organism=Mus musculus DNA sequence DA(H3):DT(G37) DT(H4):DA(G36) DC(H5):DG(G35) DA(H6):DT(G34) DT(H7):DA(G33) DG(H8):DC(G32) DT(H9):DA(G31) DA(H10):DT(G30) DC(H11):DG(G29) DA(H12):DT(G28) DG(H13):DC(G27) DA(H14):DT(G26) DT(H15):DA(G25) DC(H16):DG(G24) DA(H17):DT(G23) DG(H18):DC(G22) DT(H19):DA(G21) DC(H20):DG(G20) DA(H21):DT(G19) DT(H22):DA(G18) DA(H23):DT(G17) DG(H24):DC(G16) DA(H25):DT(G15) DT(H26):DA(G14) DC(H27):DG(G13) DA(H28):DT(G12) DC(H29):DG(G11) DT(H30):DA(G10) DA(H31):DT(G9) DG(H32):DC(G8) DT(H33):DA(G7) DA(H34):DT(G6) DG(H35):DC(G5) DA(H36):DT(G4) DT(H37):DA(G3) DC(H38):DG(G2) chainD ( 13) ARG161 0 0 0 6 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkriprgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifd >5n8o_A:Origin_of_replication-binding_domain,_RBD-like;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO EM STRUCTURE OF THE CONJUGATIVE RELAXASE TRAI OF THE F/R1 PLASMID SYSTEM organism=ESCHERICHIA COLI DNA sequence DT(C5) DT(C6) DT(C7) DT(C8) DT(C9) DT(C10) DT(C11) DT(C12) DT(C13) DT(C14) DT(C15) DT(C16) DT(C17) DT(C18) DT(C19) DT(C20) DT(C21) DT(C22) chainA ( 1) MET1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) ILE194 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG198 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) HIS221 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) ARG330 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 (293) GLN333 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 (430) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 (500) ARG540 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (503) THR543 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (596) PRO636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 (598) TRP638 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 5 0 0 (681) THR721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 (683) LYS723 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (791) SER832 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 (792) PHE833 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 (837) LYS878 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (1007) HIS1048 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (1014) ARG1055 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (1038) GLU1079 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1064) ALA1105 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (1065) ILE1106 0 0 0 0 0 0 20 7 0 0 0 0 0 0 0 0 0 0 (1225) THR1266 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (1229) ARG1270 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 (1230) ASP1271 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (1248) LEU1289 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (1362) HIS1403 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 (1383) LYS1424 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1385) MET1426 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence MmsiaqvrsagsagnyytdkdnyyvlgsmgerwagkgaeqlglqgsvdkdvftrllegrlpdgadlsrmqdgsnkhrpgydltfsapksvsmmamlggdkrlidahnqavdfavrqvealastrvmtdgqsetvltgnlvmalfnhdtsrdqepqlhthavvanvtqhngewktlssdkvgktgfienvyanqIafgRlyreklkeqvealgyetevvgkHgmwempgvpveafsvdpeirmaewmqtlketgfdirayrdaadqrteirtqapdvqqavtqaiaglseRkvQftytdvlartvgilppengvieraragideaisreqlipldrekglftsgihvldelsvralsrdimkqnrvtvhpeksvprtagysdavsvlaqdrpslaivsgqggaagqrervaelvmmareqgrevqiiaadRrsqmnlkqderlsgelitgrrqllegmaftpgstvivdqgeklslketltlldgaarhnvqvlitdsgqRtgTgsalmamkdagvntyrwqggeqrpatiisepdrnvryarlagdfaasvkageesvaqvsgvreqailtqairselktqgvlghpevtmtalsPvWldsrsrylrdmyrpgmvmeqwnpetrshdryvidrvtaqshsltlrdaqgetqvvrissldsswslfrpekmpvadgerlrvTgKipglrvsggdrlqvasvsedamtvvvpgraepaslpvsdspftalklengwvetpghsvsdsatvfasvtqmamnatlnglarsgrdvrlyssldetrtaeklarhpSFtvvseqikaragetlletaislqkaglhtpaqqaihlalpvlesKnlafsmvdllteaksfaaegtgftelggeinaqikrgdllyvdvakgygtgllvsrasyeaeksilrhilegkeavtplmervpgelmetltsgqraatrmiletsdrftvvqgyagvgkttqfravmsavnmlpaserprvvglgpthravgemrsagvdaqtlasflHdtqlqqRsgetpdfsntlflldessmvgntEmarayaliaagggravasgdtdqlqAIapgqsfrlqqtrsaadvvimkeivrqtpelreavyslinrdveralsglesvkpsqvprlegawapehsvtefshsqeaklaeaqqkamlkgeafpdipmtlyeaivrdytgrtpeareqtlivthlnedrrvlnsmihdarekagelgkeqvmvpvlnTaniRDgelrrlstweknpdalaLvdnvyhriagiskddglitlqdaegntrlispreavaegvtlytpdkirvgtgdrmrftksdrergyvansvwtvtavsgdsvtlsdgqqtrvirpgqeraeqhidlayaitaHgaqgasetfaialegtegnrKlMagfesayvalsrmkqhvqvytdnrqgwtdainnavqkgtahdvlepk >5n8r_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DROSOPHILIA DHX36 HELICASE IN COMPLEX WITH GAGCACTGC organism=Drosophila melanogaster DNA sequence DG(D9) DG(D2) DA(D3) DG(D4) DC(D5) DA(D6) DC(D7) DT(D8):DG(D9) chainB (176) ARG239 6 0 0 0 0 0 0 6 (359) TYR432 0 0 0 33 0 0 0 0 (360) ASP433 0 0 0 1 0 0 0 0 (392) LEU465 0 0 0 3 0 0 0 0 (417) ILE490 0 0 0 0 1 0 0 0 (440) THR513 0 0 0 0 8 0 0 0 (451) LEU524 0 0 0 0 2 0 0 0 (495) GLU568 0 0 0 0 0 2 1 0 (503) SER576 1 0 0 0 0 0 0 1 (562) PRO635 4 0 0 0 0 0 0 4 (564) ASP637 2 0 0 0 0 0 0 2 (591) SER664 2 0 0 0 0 0 0 2 (592) PHE665 0 0 0 0 0 0 0 3 (598) SER671 0 0 0 5 0 0 0 0 (603) GLU676 0 0 6 3 0 0 0 0 (607) ASP680 0 9 4 0 0 0 0 0 (715) ARG793 0 32 0 0 0 0 0 0 (731) HIS809 0 0 1 1 0 0 0 0 (732) PRO810 0 4 13 0 0 0 0 0 (733) SER811 0 0 2 2 0 0 0 0 prot.sequence lgcnvsapsgvlervkelmedysrapdakfqqqfrhllsvnfeefvaetkernadldwvnpklderlqlelgqrqleenakkrlearkklptmkyaddiiqavrenqvilivgstgcgkttqvpqillddaisrgcasscriictqprrisaiaiaewvsyerceslgnsvgyqiRlesrkarerasitycttgvllQQlQSdplmhnlsvlildeihersvEtdllmgllkvilphrpdlkvilmsatvreqdfcdyfnncpmfriegvmfpvkmlyledvlsktnyefqpperrmkheamiepylrrirnsydsrvldklrlpesegcedidfiadlvyyicenepegailvflpgYDkisqlynildkpktskgqrwrdhmavfplhsLmqsgeqqavfrrppagqrkviistIiaetsvtiddvvyvinsgrTkaTnydietniqsLdevwvtkantqqrrgragrvrpgicynlfsraredrmddiptpEilrskleSiilslkllhiddpyrflqtlinapnpeaikmgvellkriealdqtgtltplgmhlaklPiDpqmgkmilmsalfccldpitsaaaalSFkspfySplgkEsrvDeikrrmarnmrsdhlmvhntiiayrdsryshaerdfcyknflssmtlqqlermknqfsellynykflassnckdaasnknsekipllraiigaglypnmahlrksrqRaihtmatddgrrvnfHPSsvnsgesgfdsayfvyfqrqkstdlflldstmvfpmaliifgdgveagvtqntpylcvaktyyfkcnretadvviqlrsnleklllkkalypapieengyekqlikaielllslderl >5n8s_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DROSOPHILA DHX36 HELICASE IN COMPLEX WITH POLYT organism=Drosophila melanogaster DNA sequence DT(C9) DT(C8) DT(C7) DT(C6) DT(C5) DT(C4) DT(C3) DT(C2) DT(C1):DT(C2) chainA (178) ARG239 0 5 0 0 0 0 0 0 0 (200) GLN261 5 4 0 0 0 0 0 0 0 (201) GLN262 5 0 0 0 0 0 0 0 0 (203) GLN264 9 0 0 0 0 0 0 0 0 (204) SER265 5 0 0 0 0 0 0 0 0 (359) TYR432 0 0 0 0 0 0 22 0 0 (392) LEU465 0 0 0 0 0 0 2 0 0 (440) THR513 0 0 0 0 0 5 0 0 0 (451) LEU524 0 0 0 0 0 5 0 0 0 (560) LYS633 3 0 0 0 0 0 0 0 0 (562) PRO635 0 3 0 0 0 0 0 0 0 (591) SER664 0 1 0 0 0 0 0 0 0 (592) PHE665 0 0 5 0 0 0 0 0 0 (598) SER671 0 0 0 0 0 0 7 0 0 (603) GLU676 0 0 0 0 0 0 1 2 2 (607) ASP680 0 0 0 0 0 0 0 1 1 (714) ARG793 0 0 0 0 0 0 0 0 21 (730) HIS809 0 0 0 0 0 0 0 6 6 (731) PRO810 0 0 0 0 0 0 0 13 15 (732) SER811 0 0 0 0 0 0 0 4 4 (752) GLN831 0 0 0 0 0 4 0 0 0 prot.sequence irlgcnvsapsgvlervkelmedysrapdakfqqqfrhllsvnfeefvaetkernadldwvnpklderlqlelgqrqleenakkrlearkklptmkyaddiiqavrenqvilivgstgcgkttqvpqillddaisrgcasscriictqprrisaiaiaewvsyerceslgnsvgyqiRlesrkarerasitycttgvllQQlQSdplmhnlsvlildeihersvetdllmgllkvilphrpdlkvilmsatvreqdfcdyfnncpmfriegvmfpvkmlyledvlsktnyefqkrrmkheamiepylrrirnsydsrvldklrlpesegcedidfiadlvyyicenepegailvflpgYdkisqlynildkpktskgqrwrdhmavfplhsLmqsgeqqavfrrppagqrkviistiiaetsvtiddvvyvinsgrtkaTnydietniqsLdevwvtkantqqrrgragrvrpgicynlfsraredrmddiptpeilrsklesiilslkllhiddpyrflqtlinapnpeaikmgvellkriealdqtgtltplgmhlaKlPidpqmgkmilmsalfccldpitsaaaalSFkspfySplgkEsrvDeikrrmarnmrsdhlmvhntiiayrdsryshaerdfcyknflssmtlqqlermknqfseLlynykflassnckdaasnknsekipllraiigaglypnmahlrksrRaihtmatddgrrvnfHPSsvnsgesgfdsayfvyfqrQkstdlflldstmvfpmaliifgdgveagvtqntpylcvaktyyfkcnretadvviqlrsnleklllkkalypapieengyekqlikaielllslderl >5n8u_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DROSOPHILA DHX36 HELICASE IN COMPLEX WITH CTCTCCT organism=Drosophila melanogaster DNA sequence DC(D1) DT(D2) DC(D3) DT(D4) DC(D5) DC(D6) DC(D7):DT(D8) chainB (178) ARG239 0 0 0 0 0 0 9 (200) GLN261 0 0 0 0 0 0 3 (358) TYR432 0 0 23 0 0 0 0 (391) LEU465 0 0 2 0 0 0 0 (439) THR513 0 0 0 9 0 0 0 (450) LEU524 0 0 0 5 0 0 0 (494) GLU568 0 0 0 0 0 1 0 (561) PRO635 0 0 0 0 0 0 3 (590) SER664 0 0 0 0 0 0 4 (591) PHE665 0 0 0 0 0 0 5 (597) SER671 0 0 8 0 0 0 0 (602) GLU676 0 1 3 0 0 0 0 (606) ASP680 0 1 0 0 0 0 0 (713) ARG793 25 0 0 0 0 0 0 (729) HIS809 0 2 0 0 0 0 0 (730) PRO810 2 10 0 0 0 0 0 (731) SER811 0 2 0 0 0 0 0 (751) GLN831 0 0 0 1 0 0 0 prot.sequence irlgcnvsapsgvlervkelmedysrapdakfqqqfrhllsvnfeefvaetkernadldwvnpklderlqlelgqrqleenakkrlearkklptmkyaddiiqavrenqvilivgstgcgkttqvpqillddaisrgcasscriictqprrisaiaiaewvsyerceslgnsvgyqiRlesrkarerasitycttgvllQqlqsdplmhnlsvlildeihersvetdllmgllkvilphrpdlkvilmsatvreqdfcdyfnncpmfriegvmfpvkmlyledvlsktnyefqkrmkheamiepylrrirnsydsrvldklrlpesegcedidfiadlvyyicenepegailvflpgYdkisqlynildkpktskgqrwrdhmavfplhsLmqsgeqqavfrrppagqrkviistiiaetsvtiddvvyvinsgrtkaTnydietniqsLdevwvtkantqqrrgragrvrpgicynlfsraredrmddiptpEilrsklesiilslkllhiddpyrflqtlinapnpeaikmgvellkriealdqtgtltplgmhlaklPidpqmgkmilmsalfccldpitsaaaalSFkspfySplgkEsrvDeikrrmarnmrsdhlmvhntiiayrdsryshaerdfcyknflssmtlqqlermknqfsellynykflassnckdaasnknsekipllraiigaglypnmahlrksrRaihtmatddgrrvnfHPSsvnsgesgfdsayfvyfqrQkstdlflldstmvfpmaliifgdgveagvtqntpylcvaktyyfkcnretadvviqlrsnleklllkkalypapieengyekqlikaielllslderl >5n8z_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DROSOPHILA DHX36 HELICASE IN COMPLEX WITH CTCTCCCTT organism=Drosophila melanogaster DNA sequence DC(D1) DT(D2) DC(D3) DT(D4) DC(D5) DC(D6) DC(D7) DT(D8) DT(D9) chainB (178) ARG239 0 0 0 0 0 0 0 8 0 (200) GLN261 0 0 0 0 0 0 0 1 1 (201) GLN262 0 0 0 0 0 0 0 0 4 (203) GLN264 0 0 0 0 0 0 0 0 5 (204) SER265 0 0 0 0 0 0 0 0 7 (358) TYR432 0 0 18 0 0 0 0 0 0 (391) LEU465 0 0 2 0 0 0 0 0 0 (439) THR513 0 0 0 10 0 0 0 0 0 (450) LEU524 0 0 0 5 0 0 0 0 0 (561) PRO635 0 0 0 0 0 0 0 3 0 (563) ASP637 0 0 0 0 0 0 0 2 0 (590) SER664 0 0 0 0 0 0 0 5 0 (591) PHE665 0 0 0 0 0 0 6 0 0 (597) SER671 0 0 4 0 0 0 0 0 0 (602) GLU676 0 2 4 0 0 0 0 0 0 (606) ASP680 1 1 0 0 0 0 0 0 0 (713) ARG793 15 0 0 0 0 0 0 0 0 (729) HIS809 0 2 0 0 0 0 0 0 0 (730) PRO810 3 7 0 0 0 0 0 0 0 (731) SER811 0 1 0 0 0 0 0 0 0 (735) SER815 1 0 0 0 0 0 0 0 0 prot.sequence irlgcnvsapsgvlervkelmedysrapdakfqqqfrhllsvnfeefvaetkernadldwvnpklderlqlelgqrqleenakkrlearkklptmkyaddiiqavrenqvilivgstgcgkttqvpqillddaisrgcasscriictqprrisaiaiaewvsyerceslgnsvgyqiRlesrkarerasitycttgvllQQlQSdplmhnlsvlildeihersvetdllmgllkvilphrpdlkvilmsatvreqdfcdyfnncpmfriegvmfpvkmlyledvlsktnyefqkrmkheamiepylrrirnsydsrvldklrlpesegcedidfiadlvyyicenepegailvflpgYdkisqlynildkpktskgqrwrdhmavfplhsLmqsgeqqavfrrppagqrkviistiiaetsvtiddvvyvinsgrtkaTnydietniqsLdevwvtkantqqrrgragrvrpgicynlfsraredrmddiptpeilrsklesiilslkllhiddpyrflqtlinapnpeaikmgvellkriealdqtgtltplgmhlaklPiDpqmgkmilmsalfccldpitsaaaalSFkspfySplgkEsrvDeikrrmarnmrsdhlmvhntiiayrdsryshaerdfcyknflssmtlqqlermknqfsellynykflassnckdaasnknsekipllraiigaglypnmahlrksrRaihtmatddgrrvnfHPSsvnSgesgfdsayfvyfqrqkstdlflldstmvfpmaliifgdgveagvtqntpylcvaktyyfkcnretadvviqlrsnleklllkkalypapieengyekqlikaielllslderl >5n90_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DROSOPHILA DHX36 HELICASE IN COMPLEX WITH TTGTGGTGT organism=Drosophila melanogaster DNA sequence DT(D1) DT(D2) DG(D3) DT(D4) DG(D5) DG(D6) DT(D7) DG(D8) DT(D9) chainB (178) ARG239 0 0 0 0 0 0 0 3 0 (200) GLN261 0 0 0 0 0 0 0 0 1 (201) GLN262 0 0 0 0 0 0 0 0 7 (203) GLN264 0 0 0 0 0 0 0 0 5 (204) SER265 0 0 0 0 0 0 0 0 6 (225) GLU286 0 0 0 0 0 1 0 0 0 (358) TYR432 0 0 23 0 0 0 0 0 0 (359) ASP433 0 0 1 0 0 0 0 0 0 (391) LEU465 0 0 3 0 0 0 0 0 0 (416) ILE490 0 0 0 1 0 0 0 0 0 (436) THR510 0 0 0 1 0 0 0 0 0 (439) THR513 0 0 0 9 1 0 0 0 0 (450) LEU524 0 0 0 3 0 0 0 0 0 (494) GLU568 0 0 0 1 8 0 0 0 0 (497) ARG571 0 0 0 3 0 0 0 0 0 (502) SER576 0 0 0 0 0 0 0 3 0 (561) PRO635 0 0 0 0 0 0 0 3 0 (563) ASP637 0 0 0 0 0 0 0 4 0 (590) SER664 0 0 0 0 0 0 0 2 0 (591) PHE665 0 0 0 0 0 0 2 0 0 (597) SER671 0 0 4 0 0 0 0 0 0 (602) GLU676 0 3 3 0 0 0 0 0 0 (606) ASP680 1 2 0 0 0 0 0 0 0 (713) ARG793 30 0 0 0 0 0 0 0 0 (729) HIS809 0 3 1 0 0 0 0 0 0 (730) PRO810 3 10 0 0 0 0 0 0 0 (731) SER811 0 1 2 0 0 0 0 0 0 prot.sequence irlgcnvsapsgvlervkelmedysrapdakfqqqfrhllsvnfeefvaetkernadldwvnpklderlqlelgqrqleenakkrlearkklptmkyaddiiqavrenqvilivgstgcgkttqvpqillddaisrgcasscriictqprrisaiaiaewvsyerceslgnsvgyqiRlesrkarerasitycttgvllQQlQSdplmhnlsvlildeihersvEtdllmgllkvilphrpdlkvilmsatvreqdfcdyfnncpmfriegvmfpvkmlyledvlsktnyefqkrmkheamiepylrrirnsydsrvldklrlpesegcedidfiadlvyyicenepegailvflpgYDkisqlynildkpktskgqrwrdhmavfplhsLmqsgeqqavfrrppagqrkviistIiaetsvtiddvvyvinsgrTkaTnydietniqsLdevwvtkantqqrrgragrvrpgicynlfsraredrmddiptpEilRskleSiilslkllhiddpyrflqtlinapnpeaikmgvellkriealdqtgtltplgmhlaklPiDpqmgkmilmsalfccldpitsaaaalSFkspfySplgkEsrvDeikrrmarnmrsdhlmvhntiiayrdsryshaerdfcyknflssmtlqqlermknqfsellynykflassnckdaasnknsekipllraiigaglypnmahlrksrRaihtmatddgrrvnfHPSsvnsgesgfdsayfvyfqrqkstdlflldstmvfpmaliifgdgveagvtqntpylcvaktyyfkcnretadvviqlrsnleklllkkalypapieengyekqlikaielllslderl >5n96_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DROSOPHILA DHX36 HELICASE IN COMPLEX WITH AGGGTTTTTT organism=Drosophila melanogaster DNA sequence DA(C2) DG(C3) DG(C4) DG(C5) DT(C6) DT(C7) DT(C8) DT(C9) DT(C10) DT(C11) chainA (178) ARG239 0 0 0 0 0 0 0 5 0 0 (200) GLN261 0 0 0 0 0 0 0 3 5 0 (201) GLN262 0 0 0 0 0 0 0 0 4 0 (203) GLN264 0 0 0 0 0 0 0 0 9 0 (204) SER265 0 0 0 0 0 0 0 0 8 0 (358) TYR432 0 0 31 0 0 0 0 0 0 0 (359) ASP433 0 0 3 0 0 0 0 0 0 0 (391) LEU465 0 0 2 0 0 0 0 0 0 0 (439) THR513 0 0 0 11 0 0 0 0 0 0 (450) LEU524 0 0 0 3 0 0 0 0 0 0 (494) GLU568 0 0 0 0 0 1 0 0 0 0 (497) ARG571 0 0 0 3 0 0 0 0 0 0 (561) PRO635 0 0 0 0 0 0 0 3 0 0 (563) ASP637 0 0 0 0 0 0 0 1 0 0 (590) SER664 0 0 0 0 0 0 0 4 0 0 (591) PHE665 0 0 0 0 0 0 3 0 0 0 (597) SER671 0 0 3 0 0 0 0 0 0 0 (602) GLU676 0 3 2 0 0 0 0 0 0 0 (606) ASP680 6 6 0 0 0 0 0 0 0 0 (713) ARG793 33 0 0 0 0 0 0 0 0 0 (729) HIS809 0 1 0 0 0 0 0 0 0 0 (730) PRO810 4 10 0 0 0 0 0 0 0 0 (731) SER811 0 3 0 0 0 0 0 0 0 0 prot.sequence irlgcnvsapsgvlervkelmedysrapdakfqqqfrhllsvnfeefvaetkernadldwvnpklderlqlelgqrqleenakkrlearkklptmkyaddiiqavrenqvilivgstgcgkttqvpqillddaisrgcasscriictqprrisaiaiaewvsyerceslgnsvgyqiRlesrkarerasitycttgvllQQlQSdplmhnlsvlildeihersvetdllmgllkvilphrpdlkvilmsatvreqdfcdyfnncpmfriegvmfpvkmlyledvlsktnyefqkrmkheamiepylrrirnsydsrvldklrlpesegcedidfiadlvyyicenepegailvflpgYDkisqlynildkpktskgqrwrdhmavfplhsLmqsgeqqavfrrppagqrkviistiiaetsvtiddvvyvinsgrtkaTnydietniqsLdevwvtkantqqrrgragrvrpgicynlfsraredrmddiptpEilRsklesiilslkllhiddpyrflqtlinapnpeaikmgvellkriealdqtgtltplgmhlaklPiDpqmgkmilmsalfccldpitsaaaalSFkspfySplgkEsrvDeikrrmarnmrsdhlmvhntiiayrdsryshaerdfcyknflssmtlqqlermknqfsellynykflassnckdaasnknsekipllraiigaglypnmahlrksrRaihtmatddgrrvnfHPSsvnsgesgfdsayfvyfqrqkstdlflldstmvfpmaliifgdgveagvtqntpylcvaktyyfkcnretadvviqlrsnleklllkkalypapieengyekqlikaielllslderl >5n98_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DROSOPHILA DHX36 HELICASE IN COMPLEX WITH TAGGGTTTT organism=Drosophila melanogaster DNA sequence DT(C9) DT(C8) DT(C7) DG(C6) DG(C5) DG(C4) DA(C3) DT(C2):DA(C3) chainA (178) ARG239 5 0 0 0 0 0 0 0 (200) GLN261 3 0 0 0 0 0 0 0 (358) TYR432 0 0 0 0 0 26 0 0 (359) ASP433 0 0 0 0 0 1 0 0 (391) LEU465 0 0 0 0 0 2 0 0 (439) THR513 0 0 0 0 10 0 0 0 (450) LEU524 0 0 0 0 2 0 0 0 (494) GLU568 0 0 1 3 0 0 0 0 (497) ARG571 0 0 0 0 2 0 0 0 (561) PRO635 3 0 0 0 0 0 0 0 (563) ASP637 1 0 0 0 0 0 0 0 (590) SER664 4 0 0 0 0 0 0 0 (591) PHE665 0 3 0 0 0 0 0 0 (597) SER671 0 0 0 0 0 3 0 0 (602) GLU676 0 0 0 0 0 3 3 3 (606) ASP680 0 0 0 0 0 0 6 8 (713) ARG793 0 0 0 0 0 0 0 31 (729) HIS809 0 0 0 0 0 0 1 1 (730) PRO810 0 0 0 0 0 0 8 11 (731) SER811 0 0 0 0 0 0 2 2 prot.sequence irlgcnvsapsgvlervkelmedysrapdakfqqqfrhllsvnfeefvaetkernadldwvnpklderlqlelgqrqleenakkrlearkklptmkyaddiiqavrenqvilivgstgcgkttqvpqillddaisrgcasscriictqprrisaiaiaewvsyerceslgnsvgyqiRlesrkarerasitycttgvllQQlQSdplmhnlsvlildeihersvetdllmgllkvilphrpdlkvilmsatvreqdfcdyfnncpmfriegvmfpvkmlyledvlsktnyefqkrmkheamiepylrrirnsydsrvldklrlpesegcedidfiadlvyyicenepegailvflpgYDkisqlynildkpktskgqrwrdhmavfplhsLmqsgeqqavfrrppagqrkviistiiaetsvtiddvvyvinsgrtkaTnydietniqsLdevwvtkantqqrrgragrvrpgicynlfsraredrmddiptpEilRsklesiilslkllhiddpyrflqtlinapnpeaikmgvellkriealdqtgtltplgmhlaklPiDpqmgkmilmsalfccldpitsaaaalSFkspfySplgkEsrvDeikrrmarnmrsdhlmvhntiiayrdsryshaerdfcyknflssmtlqqlermknqfsellynykflassnckdaasnknsekipllraiigaglypnmahlrksrRaihtmatddgrrvnfHPSsvnsgesgfdsayfvyfqrqkstdlflldstmvfpmaliifgdgveagvtqntpylcvaktyyfkcnretadvviqlrsnleklllkkalypapieengyekqlikaielllslderl >5n9a_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DROSOPHILA DHX36 HELICASE IN COMPLEX WITH GTTAGGGTT organism=Drosophila melanogaster DNA sequence DG(C2) DT(C3) DT(C4) DA(C5) DG(C6) DG(C7) DG(C8) DT(C9) DT(C10) chainA (178) ARG239 0 0 0 0 0 0 0 6 0 (225) GLU286 0 0 0 0 0 3 0 0 0 (358) TYR432 0 0 23 0 0 0 0 0 0 (391) LEU465 0 0 3 0 0 0 0 0 0 (437) LYS511 0 0 0 1 0 0 0 0 0 (439) THR513 0 0 0 11 0 0 0 0 0 (450) LEU524 0 0 0 2 0 0 0 0 0 (494) GLU568 0 0 0 0 5 8 0 0 0 (497) ARG571 0 0 0 3 0 0 0 0 0 (561) PRO635 0 0 0 0 0 0 0 3 0 (590) SER664 0 0 0 0 0 0 0 3 0 (597) SER671 0 0 6 0 0 0 0 0 0 (602) GLU676 0 2 1 0 0 0 0 0 0 (606) ASP680 7 1 0 0 0 0 0 0 0 (713) ARG793 28 0 0 0 0 0 0 0 0 (729) HIS809 0 1 0 0 0 0 0 0 0 (730) PRO810 2 7 0 0 0 0 0 0 0 (731) SER811 0 1 0 0 0 0 0 0 0 prot.sequence irlgcnvsapsgvlervkelmedysrapdakfqqqfrhllsvnfeefvaetkernadldwvnpklderlqlelgqrqleenakkrlearkklptmkyaddiiqavrenqvilivgstgcgkttqvpqillddaisrgcasscriictqprrisaiaiaewvsyerceslgnsvgyqiRlesrkarerasitycttgvllqqlqsdplmhnlsvlildeihersvEtdllmgllkvilphrpdlkvilmsatvreqdfcdyfnncpmfriegvmfpvkmlyledvlsktnyefqkrmkheamiepylrrirnsydsrvldklrlpesegcedidfiadlvyyicenepegailvflpgYdkisqlynildkpktskgqrwrdhmavfplhsLmqsgeqqavfrrppagqrkviistiiaetsvtiddvvyvinsgrtKaTnydietniqsLdevwvtkantqqrrgragrvrpgicynlfsraredrmddiptpEilRsklesiilslkllhiddpyrflqtlinapnpeaikmgvellkriealdqtgtltplgmhlaklPidpqmgkmilmsalfccldpitsaaaalSfkspfySplgkEsrvDeikrrmarnmrsdhlmvhntiiayrdsryshaerdfcyknflssmtlqqlermknqfsellynykflassnckdaasnknsekipllraiigaglypnmahlrksrRaihtmatddgrrvnfHPSsvnsgesgfdsayfvyfqrqkstdlflldstmvfpmaliifgdgveagvtqntpylcvaktyyfkcnretadvviqlrsnleklllkkalypapieengyekqlikaielllslderl >5n9d_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DROSOPHILA DHX36 HELICASE IN COMPLEX WITH GGGTTAGGGT organism=Drosophila melanogaster DNA sequence DG(C2) DG(C3) DG(C4) DT(C5) DT(C6) DA(C7) DG(C8) DG(C9) DG(C10) DT(C11) chainA (178) ARG239 0 0 0 0 0 0 0 2 0 0 (200) GLN261 0 0 0 0 0 0 0 5 7 0 (201) GLN262 0 0 0 0 0 0 0 0 8 0 (203) GLN264 0 0 0 0 0 0 0 0 14 0 (204) SER265 0 0 0 0 0 0 0 0 8 1 (358) TYR432 0 0 26 0 0 0 0 0 0 0 (359) ASP433 0 0 1 0 0 0 0 0 0 0 (391) LEU465 0 0 3 0 0 0 0 0 0 0 (439) THR513 0 0 0 9 0 0 0 0 0 0 (450) LEU524 0 0 0 4 0 0 0 0 0 0 (494) GLU568 0 0 0 0 1 9 0 0 0 0 (502) SER576 0 0 0 0 0 0 0 2 0 0 (559) LYS633 0 0 0 0 0 0 0 0 0 1 (561) PRO635 0 0 0 0 0 0 0 4 0 0 (563) ASP637 0 0 0 0 0 0 0 4 0 0 (590) SER664 0 0 0 0 0 0 0 1 0 0 (597) SER671 0 0 3 0 0 0 0 0 0 0 (602) GLU676 0 4 1 0 0 0 0 0 0 0 (606) ASP680 5 9 0 0 0 0 0 0 0 0 (666) LEU740 0 0 0 0 0 0 0 0 0 1 (719) ARG793 32 0 0 0 0 0 0 0 0 0 (735) HIS809 0 1 0 0 0 0 0 0 0 0 (736) PRO810 4 12 0 0 0 0 0 0 0 0 (737) SER811 0 3 0 0 0 0 0 0 0 0 (741) SER815 1 0 0 0 0 0 0 0 0 0 prot.sequence irlgcnvsapsgvlervkelmedysrapdakfqqqfrhllsvnfeefvaetkernadldwvnpklderlqlelgqrqleenakkrlearkklptmkyaddiiqavrenqvilivgstgcgkttqvpqillddaisrgcasscriictqprrisaiaiaewvsyerceslgnsvgyqiRlesrkarerasitycttgvllQQlQSdplmhnlsvlildeihersvetdllmgllkvilphrpdlkvilmsatvreqdfcdyfnncpmfriegvmfpvkmlyledvlsktnyefqkrmkheamiepylrrirnsydsrvldklrlpesegcedidfiadlvyyicenepegailvflpgYDkisqlynildkpktskgqrwrdhmavfplhsLmqsgeqqavfrrppagqrkviistiiaetsvtiddvvyvinsgrtkaTnydietniqsLdevwvtkantqqrrgragrvrpgicynlfsraredrmddiptpEilrskleSiilslkllhiddpyrflqtlinapnpeaikmgvellkriealdqtgtltplgmhlaKlPiDpqmgkmilmsalfccldpitsaaaalSfkspfySplgkEsrvDeikrrmarnmrsdhlmvhntiiayrdsryshaerdfcyknflssmtlqqlermknqfseLlynykflassnckdaasnknsekipllraiigaglypnmahlrksrqiknrvRaihtmatddgrrvnfHPSsvnSgesgfdsayfvyfqrqkstdlflldstmvfpmaliifgdgveagvtqntpylcvaktyyfkcnretadvviqlrsnleklllkkalypapieengyekqlikaielllslderl >5n9e_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DROSOPHILA DHX36 HELICASE IN COMPLEX WITH TGGGGATTT organism=Drosophila melanogaster DNA sequence DT(D2) DG(D3) DG(D4) DG(D5) DG(D6) DA(D7) DT(D8) DT(D9) DT(D10) chainB (176) ARG239 0 0 0 0 0 0 0 5 0 (198) GLN261 0 0 0 0 0 0 0 4 1 (199) GLN262 0 0 0 0 0 0 0 0 2 (201) GLN264 0 0 0 0 0 0 0 0 10 (202) SER265 0 0 0 0 0 0 0 0 10 (359) TYR432 0 0 30 0 0 0 0 0 0 (392) LEU465 0 0 3 0 0 0 0 0 0 (440) THR513 0 0 0 9 1 0 0 0 0 (451) LEU524 0 0 0 1 0 0 0 0 0 (495) GLU568 0 0 0 0 5 3 0 0 0 (498) ARG571 0 0 0 6 1 0 0 0 0 (560) LYS633 0 0 0 0 0 0 0 0 1 (562) PRO635 0 0 0 0 0 0 0 4 0 (564) ASP637 0 0 0 0 0 0 0 1 0 (591) SER664 0 0 0 0 0 0 0 4 0 (592) PHE665 0 0 0 0 0 0 3 0 0 (598) SER671 0 1 6 0 0 0 0 0 0 (603) GLU676 0 5 1 0 0 0 0 0 0 (607) ASP680 2 4 0 0 0 0 0 0 0 (671) TYR744 0 0 0 0 0 0 0 0 1 (715) ARG793 34 0 0 0 0 0 0 0 0 (732) PRO810 3 9 0 0 0 0 0 0 0 (733) SER811 0 2 2 0 0 0 0 0 0 (737) SER815 1 0 0 0 0 0 0 0 0 prot.sequence lgcnvsapsgvlervkelmedysrapdakfqqqfrhllsvnfeefvaetkernadldwvnpklderlqlelgqrqleenakkrlearkklptmkyaddiiqavrenqvilivgstgcgkttqvpqillddaisrgcasscriictqprrisaiaiaewvsyerceslgnsvgyqiRlesrkarerasitycttgvllQQlQSdplmhnlsvlildeihersvetdllmgllkvilphrpdlkvilmsatvreqdfcdyfnncpmfriegvmfpvkmlyledvlsktnyefqpperrmkheamiepylrrirnsydsrvldklrlpesegcedidfiadlvyyicenepegailvflpgYdkisqlynildkpktskgqrwrdhmavfplhsLmqsgeqqavfrrppagqrkviistiiaetsvtiddvvyvinsgrtkaTnydietniqsLdevwvtkantqqrrgragrvrpgicynlfsraredrmddiptpEilRsklesiilslkllhiddpyrflqtlinapnpeaikmgvellkriealdqtgtltplgmhlaKlPiDpqmgkmilmsalfccldpitsaaaalSFkspfySplgkEsrvDeikrrmarnmrsdhlmvhntiiayrdsryshaerdfcyknflssmtlqqlermknqfsellynYkflassnckdaasnknsekipllraiigaglypnmahlrksrqRaihtmatddgrrvnfhPSsvnSgesgfdsayfvyfqrqkstdlflldstmvfpmaliifgdgveagvtqntpylcvaktyyfkcnretadvviqlrsnleklllkkalypapieengyekqlikaielllslderl >5n9f_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF DROSOPHILA DHX36 HELICASE IN COMPLEX WITH SSDNA CPG_A organism=Drosophila melanogaster DNA sequence DG(D2) DG(D3) DG(D4) DG(D5) DA(D6) DC(D7) DG(D8) DA(D9) DT(D10) DC(D11) chainB (178) ARG239 0 0 0 0 0 0 0 1 0 0 (200) GLN261 0 0 0 0 0 0 0 6 4 0 (201) GLN262 0 0 0 0 0 0 0 0 2 0 (203) GLN264 0 0 0 0 0 0 0 0 2 0 (204) SER265 0 0 0 0 0 0 0 0 8 0 (225) GLU286 0 0 0 0 0 0 1 0 0 0 (358) TYR432 0 0 25 0 0 0 0 0 0 0 (359) ASP433 0 0 3 0 0 0 0 0 0 0 (391) LEU465 0 0 3 0 0 0 0 0 0 0 (439) THR513 0 0 0 11 0 0 0 0 0 0 (450) LEU524 0 0 0 4 0 0 0 0 0 0 (494) GLU568 0 0 0 0 2 5 0 0 0 0 (497) ARG571 0 0 0 1 0 0 0 0 0 0 (502) SER576 0 0 0 0 0 0 0 4 0 0 (561) PRO635 0 0 0 0 0 0 0 3 0 0 (563) ASP637 0 0 0 0 0 0 0 3 0 0 (597) SER671 0 0 3 0 0 0 0 0 0 0 (602) GLU676 0 3 5 0 0 0 0 0 0 0 (606) ASP680 5 8 0 0 0 0 0 0 0 0 (610) ARG684 1 0 0 0 0 0 0 0 0 0 (719) ARG793 31 0 0 0 0 0 0 0 0 0 (736) PRO810 4 12 0 0 0 0 0 0 0 0 (737) SER811 0 1 0 0 0 0 0 0 0 0 (741) SER815 1 0 0 0 0 0 0 0 0 0 prot.sequence irlgcnvsapsgvlervkelmedysrapdakfqqqfrhllsvnfeefvaetkernadldwvnpklderlqlelgqrqleenakkrlearkklptmkyaddiiqavrenqvilivgstgcgkttqvpqillddaisrgcasscriictqprrisaiaiaewvsyerceslgnsvgyqiRlesrkarerasitycttgvllQQlQSdplmhnlsvlildeihersvEtdllmgllkvilphrpdlkvilmsatvreqdfcdyfnncpmfriegvmfpvkmlyledvlsktnyefqkrmkheamiepylrrirnsydsrvldklrlpesegcedidfiadlvyyicenepegailvflpgYDkisqlynildkpktskgqrwrdhmavfplhsLmqsgeqqavfrrppagqrkviistiiaetsvtiddvvyvinsgrtkaTnydietniqsLdevwvtkantqqrrgragrvrpgicynlfsraredrmddiptpEilRskleSiilslkllhiddpyrflqtlinapnpeaikmgvellkriealdqtgtltplgmhlaklPiDpqmgkmilmsalfccldpitsaaaalsfkspfySplgkEsrvDeikRrmarnmrsdhlmvhntiiayrdsryshaerdfcyknflssmtlqqlermknqfsellynykflassnckdaasnknsekipllraiigaglypnmahlrksrqiknrvRaihtmatddgrrvnfhPSsvnSgesgfdsayfvyfqrqkstdlflldstmvfpmaliifgdgveagvtqntpylcvaktyyfkcnretadvviqlrsnleklllkkalypapieengyekqlikaielllslderl >5n9g_AC:Homeodomain-like;TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon; title=TFIIIB -TBP/BRF2/DNA AND SANT DOMAIN OF BDP1- organism=HOMO SAPIENS DNA sequence DT(E2):A(b27) DT(E3):A(b26) G(a4):C(b25) A(a5):DT(D24) A(a6):DT(D23) G(a7):C(b22) G(a8):C(b21) G(a9):C(b20) C(a10):G(b19) DT(E11):A(b18) DT(E12):A(b17) A(a13):DT(D16) A(a14):DT(D15) A(a15):DT(D14) A(a16):DT(D13) DT(E17):A(b12) A(a18):DT(D11) G(a19):C(b10) G(a20):C(b9) DT(E21):DA(D8) DG(E22):DC(D7) DT(E23):DA(D6) DG(E24):DC(D5) DA(E25):DT(D4) DC(E26):DG(D3) chainA ( 3) ARG67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 46) ARG110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 1 0 0 0 (196) TYR260 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 12) ASN297 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR299 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vsRsqqrglrrvrdlcrvlqlpptfedtavayyqqayrhsgiraaRlqkkevlvgccvlitcrqhnwpltmgaictllyadldvfsstymqivkllgldvpslclaelvktycssfklfqaspsvpakyvedkekmlsrtmqlvelanetwlvtgrhplpvitaatflawqslqpadrlscslarfcklanvdlpYpassrlqellavllrmaeqlawlrvlrldkrsvvkhigdllqhrqslvrsafrdgtaepalllppcmlkspkricpvppvstvtgdenisdseieqylrtpqevrdfqraq/gstttyssfrkNyYskpwsnketdmfflaismvgtdfsmigqlfphrarieiknkfkreektngwridkafqekrpfdfdffahllqkvlaeeekrk >5n9g_C:Homeodomain-like; title=TFIIIB -TBP/BRF2/DNA AND SANT DOMAIN OF BDP1- organism=HOMO SAPIENS DNA sequence DG(D3):DC(E26) DT(D4):DA(E25) DC(D5):DG(E24) DA(D6):DT(E23) DC(D7):DG(E22) DA(D8):DT(E21) C(a9):G(b20) C(a10):G(b19) DT(D11):A(b18) A(a12):DT(E17) DT(D13):A(b16) DT(D14):A(b15) DT(D15):A(b14) DT(D16):A(b13) A(a17):DT(E12) A(a18):DT(E11) G(a19):C(b10) C(a20):G(b9) C(a21):G(b8) C(a22):G(b7) DT(D23):A(b6) DT(D24):A(b5) C(a25):G(b4) A(a26):DT(E3) A(a27):DT(E2) chainC ( 12) ASN297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 ( 14) TYR299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 prot.sequence gstttyssfrkNyYskpwsnketdmfflaismvgtdfsmigqlfphrarieiknkfkreektngwridkafqekrpfdfdffahllqkvlaeeekrk >5n9g_FH:Homeodomain-like;TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon; title=TFIIIB -TBP/BRF2/DNA AND SANT DOMAIN OF BDP1- organism=? DNA sequence DT(J2):A(b27) DT(J3):A(b26) G(a4):C(b25) A(a5):DT(I24) A(a6):DT(I23) G(a7):C(b22) G(a8):C(b21) G(a9):C(b20) C(a10):G(b19) DT(J11):A(b18) DT(J12):A(b17) A(a13):DT(I16) A(a14):DT(I15) A(a15):DT(I14) A(a16):DT(I13) DT(J17):A(b12) A(a18):DT(I11) G(a19):C(b10) G(a20):C(b9) DT(J21):DA(I8) DG(J22):DC(I7) DT(J23):DA(I6) DG(J24):DC(I5) DA(J25):DT(I4) DC(J26):DG(I3) chainF ( 46) ARG110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 1 0 0 0 (196) TYR260 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 11) ASN297 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) TYR299 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vsrsqqrglrrvrdlcrvlqlpptfedtavayyqqayrhsgiraaRlqkkevlvgccvlitcrqhnwpltmgaictllyadldvfsstymqivkllgldvpslclaelvktycssfklfqaspsvpakyvedkekmlsrtmqlvelanetwlvtgrhplpvitaatflawqslqpadrlscslarfcklanvdlpYpassrlqellavllrmaeqlawlrvlrldkrsvvkhigdllqhrqslvrsafalllppcmlktvtgdenisdseieqylrtpqevrdfqraqa/stttyssfrkNyYskpwsnketdmfflaismvgtdfsmigqlfphrarieiknkfkreektngwridkafqekrpfdfdffahllqkvlaeeekrkqk >5n9g_G:TATA-box_binding_protein-like; title=TFIIIB -TBP/BRF2/DNA AND SANT DOMAIN OF BDP1- organism=HOMO SAPIENS DNA sequence DG(I3):DC(J26) DT(I4):DA(J25) DC(I5):DG(J24) DA(I6):DT(J23) DC(I7):DG(J22) DA(I8):DT(J21) C(a9):G(b20) C(a10):G(b19) DT(I11):A(b18) A(a12):DT(J17) DT(I13):A(b16) DT(I14):A(b15) DT(I15):A(b14) DT(I16):A(b13) A(a17):DT(J12) A(a18):DT(J11) G(a19):C(b10) C(a20):G(b9) C(a21):G(b8) C(a22):G(b7) DT(I23):A(b6) DT(I24):A(b5) C(a25):G(b4) A(a26):DT(J3) A(a27):DT(J2) chainG ( 11) ASN167 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) VAL169 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PHE197 0 0 0 0 0 0 0 0 10 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU212 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) PHE214 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) VAL220 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR222 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ASN257 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 (103) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 (132) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 12 0 0 0 0 0 0 0 0 0 (133) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (147) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 (149) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (155) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 (157) THR313 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gpsgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkg >5nfv_A: title=CRYSTAL STRUCTURE OF CATALYTICALLY INACTIVE FNCAS12 MUTANT BOUND TO AN R-LOOP STRUCTURE CONTAINING A PRE-CRRNA MIMIC AND FULL-LENGTH DNA TARGET organism=Francisella tularensis subsp. novicida (strain U112) / Francisella tularensis subsp. novicida (strain U112) DNA sequence DA(D-8):DT(C8) DG(D-7):DC(C7) DT(D-6):DA(C6) DC(D-5):DG(C5) DC(D-4):DG(C4) DT(D-3):DA(C3) DT(D-2):DA(C2) DT(D-1):DA(C1) DA(D0):DT(C0) DT(D1):DT(C-1) DC(D2):DC(C-2) DT(D3):DT(C-3) DA(D4):DA(C-4) DA(D5):DA(C-5) DT(D19):DT(C-6) DA(D20):DT(C-7) DG(D21):DT(C-8) DA(D22):DT(C-9) DA(D23):DC(C-10) DC(D24):DC(C-11) DT(D25):DA(C-12) DA(D26):DT(C-13) DT(D27):DT(C-14) chainA (175) THR177 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ASN185 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 (287) PHE289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (449) LYS471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (561) ARG583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (562) ASN584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (582) THR604 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (591) LYS613 0 0 0 0 0 2 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (594) ASP616 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (641) PRO663 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (644) ASN666 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 (645) LYS667 0 0 0 0 0 0 0 0 40 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (646) MET668 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (649) LYS671 0 0 0 0 0 3 6 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (729) ASP751 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 (732) TYR754 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (733) ARG755 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 (805) GLU827 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (861) PRO883 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (872) ASN894 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (1124) ARG1155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence nasiyqefvnkyslsktlrfelipqgktlenikarglilddekrakdykkakqiidkyhqffieeilssvcisedllqnysdvyfklkksdddnlqkdfksakdtikkqiseyikdsekfknlfnqnlidakksdlilwlkqskdngielfkansditdidealeiiksfkgwtTyfkgfheNrknvyssndiptsiiyrivddnlpkflenkakyeslkdkapeainyeqikkdlaeeltfdidyktsevnqrvfsldevfeianfnnylnqsgitkfntiiggkFvngentkrkgineyinlysqqindktlkkykmsvlfkqilsdtesksfvidkleddsdvvttmqsfyeqiaafktveeksiketlsllfddlkaqkldlskiyfkndksltdlsqqvfddysvigtavleyitqktekakylsletiklaleefnkhrdidKqcrfeeilanfaaipmifdeiaqnkdnlaqisikyqnqgkkdllqasaeddvkaikdlldqtnnllhklkifhisqsedkanildkdehfylvfeecyfelanivplynkiRNyitqkpysdekfklnfensTlangwdknKepDntailfikddkyylgvmnkknnkifddkaikenkgegykkivykllPgaNKMlpKvffsaksikfynpsedilrirnhsthtkngspqkgyekfefniedcrkfidfykqsiskhpewkdfgfrfsdtqrynsiDefYRevenqgykltfenisesyidsvvnqgklylfqiynkdfsayskgrpnlhtlywkalfdernlqdvvyklngEaelfyrkqsipkkithpakeaianknkdnpkkesvfeydlikdkrftedkfffhcPitinfkssgaNkfndeinlllkekandvhilsidrgerhlayytlvdgkgniikqdtfniigndrmktnyhdklaaiekdrdsarkdwkkinnikemkegylsqvvheiaklvieynaivvfqdlkvekqvyqklekmlieklnylvfkdnefdktggvlrayqltapfetfkkmgkqtgiiyyvpagftskicpvtgfvnqlypkyesvsksqeffskfdkicynldkgyfefsfdyknfgdkaakgkwtiasfgsrlinfRndtrevyptkelekllkdysieyghgecikaaicgesdkkffakltsvlntilqmansktdylispvadvngnffdsrqapknmpqdadangayhiglkglmllgriknnqegkklnlvikneeyfefvqnrnn >5nj8_AB:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURAL BASIS FOR ARYL HYDROCARBON RECEPTOR MEDIATED GENE ACTIVATION organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DG(F1):DC(E12) DG(F2):DC(E11) DT(F3):DA(E10) DT(F4):DA(E9) DG(F5):DC(E8) DC(F6):DG(E7) DG(F7):DC(E6) DT(F8):DA(E5) DG(F9):DC(E4) DA(F10):DT(E3) DC(F11):DG(E2) DC(F12):DG(E1) chainA ( 3) SER36 0 0 0 0 2 1 0 0 0 0 0 0 ( 6) HIS39 0 0 6 3 0 0 0 0 0 0 0 0 ( 7) ARG40 0 0 0 0 0 1 7 0 0 0 0 0 chainB ( 10) HIS94 0 0 0 0 0 0 0 0 10 7 0 0 ( 11) SER95 0 0 0 0 0 0 0 1 0 0 0 0 ( 13) ILE97 0 0 0 0 0 0 0 0 0 1 0 0 ( 14) GLU98 0 0 0 0 0 0 0 12 10 2 0 0 ( 17) ARG101 0 0 0 0 0 0 0 0 6 6 0 0 ( 18) ARG102 0 0 0 0 0 9 8 0 0 0 0 0 prot.sequence npSkrHRdrlnteldrlasllpfpqdvinkldklsvlrlsvsylraksffdvalkglnlqegefllqalngfvlvvttdalvfyasstiqdylgfqqsdvihqsvyelihtedraefqrqlhwppensplmercficrlrclldssgflamnfqgklkylhgqkpqlalfaiatpl/dkerlarenHSeIErrRRnkmtayitelsdmvptcpdkltilrmavshmkslrgsykpsfltdqelkhlileaadgflfivscetgrvvyvsdsvtpvlnqpqsewfgstlydqvhpddvdklreqlstssrrsficrmrchfvvvhctgyikawpdddpeakfclvaigrlqv >5nj8_C:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURAL BASIS FOR ARYL HYDROCARBON RECEPTOR MEDIATED GENE ACTIVATION organism=HOMO SAPIENS DNA sequence DG(G1):DC(H12) DG(G2):DC(H11) DT(G3):DA(H10) DC(G4):DG(H9) DA(G5):DT(H8) DC(G6):DG(H7) DG(G7):DC(H6) DC(G8):DG(H5) DA(G9):DT(H4) DA(G10):DT(H3) DC(G11):DG(H2) DC(G12):DG(H1) chainC ( 5) SER36 0 0 0 0 0 0 0 3 1 0 0 0 ( 8) HIS39 0 0 0 0 0 0 0 0 4 0 0 0 ( 9) ARG40 0 0 0 0 0 10 2 0 0 0 0 0 prot.sequence ksnpSkrHRdrlnteldrlasllpfpqdvinkldklsvlrlsvsylraksffdvalkreglnlqegefllqalngfvlvvttdalvfyasstiqdylgfqqsdvihqsvyelihtedraefqrqensplmercficrlrclflamnfqgklkylhgqkkdgsilppqlalfaiatp >5nj8_D:HLH,_helix-loop-helix_DNA-binding_domain; title=STRUCTURAL BASIS FOR ARYL HYDROCARBON RECEPTOR MEDIATED GENE ACTIVATION organism=MUS MUSCULUS DNA sequence DG(F1):DC(E12) DG(F2):DC(E11) DT(F3):DA(E10) DT(F4):DA(E9) DG(F5):DC(E8) DC(F6):DG(E7) DG(F7):DC(E6) DT(F8):DA(E5) DG(F9):DC(E4) DA(F10):DT(E3) DC(F11):DG(E2) DC(F12):DG(E1) DG(G1):DC(H12) DG(G2):DC(H11) DT(G3):DA(H10) DC(G4):DG(H9) DA(G5):DT(H8) DC(G6):DG(H7) DG(G7):DC(H6) DC(G8):DG(H5) DA(G9):DT(H4) DA(G10):DT(H3) DC(G11):DG(H2) DC(G12):DG(H1) chainD ( 11) HIS94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 10 0 0 0 0 0 0 0 ( 15) GLU98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 10 0 0 0 0 0 0 0 ( 18) ARG101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 ( 19) ARG102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 16 0 0 0 0 0 prot.sequence adkerlarenHseiErrRRnkmtayitelsdmvptcsalarkpdkltilrmavshmkslrgtstdgsykpsfltdqelkhlileaadflfyvsdsvtpvqpqsestlydsrrsficrmrchctgyikalvaigr >5nkl_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH THE ARTIFICIAL BASE PAIR DDS-DPXTP organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) DOC(B112):DG(C205) chainA (248) LYS540 0 0 0 0 0 0 0 4 5 0 0 0 (281) ARG573 0 0 0 0 0 0 0 0 0 0 3 8 (288) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 (291) ASN583 0 0 0 0 0 0 0 0 1 10 1 0 (462) GLN754 0 0 0 0 0 0 0 0 0 0 0 4 (492) HIS784 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >5nl0_D:Histone-fold; title=CRYSTAL STRUCTURE OF A 197-BP PALINDROMIC 601L NUCLEOSOME IN COMPLEX WITH LINKER HISTONE H1 organism=? DNA sequence DT(J-96):DA(I96) DA(J-95):DT(I95) DC(J-94):DG(I94) DG(J-93):DC(I93) DT(J-92):DA(I92) DA(J-91):DT(I91) DA(J-90):DT(I90) DT(J-89):DA(I89) DA(J-88):DT(I88) DT(J-87):DA(I87) DT(J-86):DA(I86) DG(J-85):DC(I85) DG(J-84):DC(I84) DC(J-83):DG(I83) DC(J-82):DG(I82) DA(J-81):DT(I81) DG(J-80):DC(I80) DC(J-79):DG(I79) DT(J-78):DA(I78) DA(J-77):DT(I77) DG(J-76):DC(I76) DG(J-75):DC(I75) DA(J-74):DT(I74) DT(J-73):DA(I73) DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DG(J68):DC(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) DA(J73):DT(I-73) DT(J74):DA(I-74) DC(J75):DG(I-75) DC(J76):DG(I-76) DT(J77):DA(I-77) DA(J78):DT(I-78) DG(J79):DC(I-79) DC(J80):DG(I-80) DT(J81):DA(I-81) DG(J82):DC(I-82) DG(J83):DC(I-83) DC(J84):DG(I-84) DC(J85):DG(I-85) DA(J86):DT(I-86) DA(J87):DT(I-87) DT(J88):DA(I-88) DA(J89):DT(I-89) DT(J90):DA(I-90) DT(J91):DA(I-91) DA(J92):DT(I-92) DC(J93):DG(I-93) DG(J94):DC(I-94) DT(J95):DA(I-95) DA(J96):DT(I-96) chainD ( 1) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Rktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5nl0_KLMN:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF A 197-BP PALINDROMIC 601L NUCLEOSOME IN COMPLEX WITH LINKER HISTONE H1 organism=XENOPUS LAEVIS DNA sequence DT(S-96):DA(T96) DA(S-95):DT(T95) DC(S-94):DG(T94) DG(S-93):DC(T93) DT(S-92):DA(T92) DA(S-91):DT(T91) DA(S-90):DT(T90) DT(S-89):DA(T89) DA(S-88):DT(T88) DT(S-87):DA(T87) DT(S-86):DA(T86) DG(S-85):DC(T85) DG(S-84):DC(T84) DC(S-83):DG(T83) DC(S-82):DG(T82) DA(S-81):DT(T81) DG(S-80):DC(T80) DC(S-79):DG(T79) DT(S-78):DA(T78) DA(S-77):DT(T77) DG(S-76):DC(T76) DG(S-75):DC(T75) DA(S-74):DT(T74) DT(S-73):DA(T73) DA(S-72):DT(T72) DT(S-71):DA(T71) DC(S-70):DG(T70) DA(S-69):DT(T69) DC(S-68):DG(T68) DA(S-67):DT(T67) DA(S-66):DT(T66) DT(S-65):DA(T65) DC(S-64):DG(T64) DC(S-63):DG(T63) DC(S-62):DG(T62) DG(S-61):DC(T61) DG(S-60):DC(T60) DT(S-59):DA(T59) DG(S-58):DC(T58) DC(S-57):DG(T57) DC(S-56):DG(T56) DG(S-55):DC(T55) DA(S-54):DT(T54) DG(S-53):DC(T53) DG(S-52):DC(T52) DC(S-51):DG(T51) DC(S-50):DG(T50) DG(S-49):DC(T49) DC(S-48):DG(T48) DT(S-47):DA(T47) DC(S-46):DG(T46) DA(S-45):DT(T45) DA(S-44):DT(T44) DT(S-43):DA(T43) DT(S-42):DA(T42) DG(S-41):DC(T41) DG(S-40):DC(T40) DT(S-39):DA(T39) DC(S-38):DG(T38) DG(S-37):DC(T37) DT(S-36):DA(T36) DA(S-35):DT(T35) DG(S-34):DC(T34) DA(S-33):DT(T33) DC(S-32):DG(T32) DA(S-31):DT(T31) DG(S-30):DC(T30) DC(S-29):DG(T29) DT(S-28):DA(T28) DC(S-27):DG(T27) DT(S-26):DA(T26) DA(S-25):DT(T25) DG(S-24):DC(T24) DC(S-23):DG(T23) DA(S-22):DT(T22) DC(S-21):DG(T21) DC(S-20):DG(T20) DG(S-19):DC(T19) DC(S-18):DG(T18) DT(S-17):DA(T17) DT(S-16):DA(T16) DA(S-15):DT(T15) DA(S-14):DT(T14) DA(S-13):DT(T13) DC(S-12):DG(T12) DG(S-11):DC(T11) DC(S-10):DG(T10) DA(S-9):DT(T9) DC(S-8):DG(T8) DG(S-7):DC(T7) DT(S-6):DA(T6) DA(S-5):DT(T5) DC(S-4):DG(T4) DG(S-3):DC(T3) DG(S-2):DC(T2) DA(S-1):DT(T1) chainK ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 chainL ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainM chainN ( 1) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnYaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/Rktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5nm9_A:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF THE PLACOZOA TRICHOPLAX ADHAERENS SMAD4-MH1 BOUND TO THE GGCGC SITE. organism=Trichoplax adhaerens DNA sequence DA(D1):DT(C18) DT(D2):DA(C17) DG(D3):DC(C16) DC(D4):DG(C15) DG(D5):DC(C14) DG(D6):DC(C13) DG(D7):DC(C12) DC(D8):DG(C11) DG(D9):DC(C10) DC(D10):DG(C9) DG(D11):DC(C8) DC(D12):DG(C7) DC(D13):DG(C6) DC(D14):DG(C5) DG(D15):DC(C4) DC(D16):DG(C3) DA(D17):DT(C2) DT(D18):DA(C1) chainA ( 67) ARG75 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) GLN77 0 0 0 0 0 0 0 2 8 4 0 0 0 0 0 0 0 0 ( 74) LYS82 0 0 0 0 0 2 4 7 1 0 0 0 0 0 0 0 0 0 prot.sequence atlgivhtlmchrqggesenfakraveslvkklkdkrdeldalitavtsngiqqskcvtiartldgRlQvagkKgfphviysriwrwpdlhknelkhiklckfafdlkldhvcvnpyhyerv >5nnu_A:Uracil-DNA_glycosylase-like; title=KSHV URACIL-DNA GLYCOSYLASE, PRODUCT COMPLEX WITH DSDNA EXHIBITING DUPLEX NUCLEOTIDE FLIPPING organism=Human herpesvirus 8 DNA sequence DA(S1):DT(T32) DA(S2):DT(T31) DT(S3):DA(T30) DG(S4):DC(T29) DT(S5):DA(T28) AAB(S6):DA(T27) DA(S7):DT(T26) DT(S8):DA(T25) DC(S9):DG(T24) DT(S10):DA(T23) DT(S11):DA(T22) chainA (189) PRO216 0 0 0 0 12 0 0 0 0 0 0 (190) LEU217 0 0 0 0 36 0 13 0 0 0 0 (193) LEU220 0 0 0 0 34 0 15 0 0 0 0 (196) ARG223 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ddrdlllapkwisflslssflkqkllsllrqirelrltttvyppqdklmwwshccdpedikvvilgqdpyhkgqatglafsvdpqcqvppslrsifreleasvpnfstpshgcldswarqgvlllntvltvekgshelgwdwftsfiississklehcvfllwgrkaidrtplinaqkhlvltaqhpsPLasLggRhsrwprfqgcnhfnlandyltrhrretvdwglleq >5nnx_A:Homeodomain-like; title=TEAD1 BOUND TO DNA organism=Homo sapiens DNA sequence DA(F2):DT(C18) DG(F3):DC(C17) DA(F4):DT(C16) DT(F5):DA(C15) DC(F6):DG(C14) DG(F7):DC(C13) DA(F8):DT(C12) DT(F9):DA(C11) DG(F10):DC(C10) DC(F11):DG(C9) DG(F12):DC(C8) DG(F13):DC(C7) DA(F14):DT(C6) DA(F15):DT(C5) DT(F16):DA(C4) DG(F17):DC(C3) DT(F18):DA(C2) DG(F19):DC(C1) chainA ( 28) ILE58 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 57) ARG87 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 58) LYS88 0 0 0 0 0 0 0 0 0 0 0 5 7 2 0 0 0 0 ( 61) SER91 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 ( 62) SER92 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 3 0 0 ( 65) GLN95 0 0 0 0 0 0 0 0 0 0 0 0 5 10 3 0 0 0 ( 66) VAL96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence aegvwspdieqsfqealaiyppcgrrkIilsdegkmygrneliaryiklrtgktrtRKqvSShiQVlarrksrd >5no1_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI XZ407 (COMPOUND 5G) organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (104) ILE112 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ARG114 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) GLN215 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) ARG222 3 10 12 6 0 0 0 0 0 0 0 0 0 0 0 0 (251) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence daeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >5no6_AN:Homeodomain-like; title=TEAD4-HOXB13 COMPLEX BOUND TO DNA organism=HOMO SAPIENS DNA sequence DA(C20):DT(F18) DT(C21):DA(F17) DT(C22):DA(F16) DT(C23):DA(F15) DT(C24):DA(F14) DA(C25):DT(F13) DT(C26):DA(F12) DT(C27):DA(F11) DG(C28):DC(F10) DC(C29):DG(F9) DA(C30):DT(F8) DT(C31):DA(F7) DT(C32):DA(F6) DC(C33):DG(F5) DC(C34):DG(F4) DA(C35):DT(F3) DG(C36):DC(F2) DT(C37):DA(F1) chainA ( 2) LYS218 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG220 0 0 8 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 46) ILE262 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLN265 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 ( 50) ASN266 0 0 0 0 13 9 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 39) ASN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 56) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 ( 57) LYS96 0 0 0 0 0 0 0 0 0 0 0 3 9 5 2 0 0 0 ( 60) SER99 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 61) SER100 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 ( 64) GLN103 0 0 0 0 0 0 0 0 0 0 5 11 5 0 0 0 0 0 ( 65) VAL104 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence rKkRipyskgqlrelereyaankfitkdkrrkisaatslseRqitIwfQNrrvkekkvlakv/egvwspdieqsfqealaiyppcgrrkiilsdegkmygrNeliaryiklrtgktrtRKqvSShiQVlarrkare >5no6_BI:Homeodomain-like; title=TEAD4-HOXB13 COMPLEX BOUND TO DNA organism=HOMO SAPIENS DNA sequence DA(D20):DT(E18) DT(D21):DA(E17) DT(D22):DA(E16) DT(D23):DA(E15) DT(D24):DA(E14) DA(D25):DT(E13) DT(D26):DA(E12) DT(D27):DA(E11) DG(D28):DC(E10) DC(D29):DG(E9) DA(D30):DT(E8) DT(D31):DA(E7) DT(D32):DA(E6) DC(D33):DG(E5) DC(D34):DG(E4) DA(D35):DT(E3) DG(D36):DC(E2) DT(D37):DA(E1) chainB ( 4) ARG220 0 2 7 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 46) ILE262 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLN265 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 ( 50) ASN266 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 chainI ( 24) ILE66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 53) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 ( 54) LYS96 0 0 0 0 0 0 0 0 0 0 0 1 7 5 1 0 0 0 ( 57) SER99 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 58) SER100 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 ( 61) GLN103 0 0 0 0 0 0 0 0 0 0 2 13 7 0 0 0 0 0 ( 62) VAL104 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence rkkRipyskgqlrelereyaankfitkdkrrkisaatslseRqitIwfQNrrvkekkvlakv/wspdieqsfqealaiyppcgrrkIilsdegkmygrneliaryiklrtgktrtRKqvSShiQVlarrkare >5no6_N:Homeodomain-like; title=TEAD4-HOXB13 COMPLEX BOUND TO DNA organism=HOMO SAPIENS DNA sequence DA(F1):DT(C37) DC(F2):DG(C36) DT(F3):DA(C35) DG(F4):DC(C34) DG(F5):DC(C33) DA(F6):DT(C32) DA(F7):DT(C31) DT(F8):DA(C30) DG(F9):DC(C29) DC(F10):DG(C28) DA(F11):DT(C27) DA(F12):DT(C26) DT(F13):DA(C25) DA(F14):DT(C24) DA(F15):DT(C23) DA(F16):DT(C22) DA(F17):DT(C21) DT(F18):DA(C20) chainN ( 39) ASN78 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG95 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) LYS96 0 0 0 2 5 9 3 0 0 0 0 0 0 0 0 0 0 0 ( 60) SER99 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) SER100 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 ( 64) GLN103 0 0 0 0 0 5 11 5 0 0 0 0 0 0 0 0 0 0 ( 65) VAL104 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence egvwspdieqsfqealaiyppcgrrkiilsdegkmygrNeliaryiklrtgktrtRKqvSShiQVlarrkare >5npk_d:Type_II_DNA_topoisomerase; title=1.98A STRUCTURE OF THIOPHENE1 WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(e-8):DT(f12) DG(e-7):DC(f11) DC(e-6):DG(f10) DC(e-5):DG(f9) DG(e-4):DC(f8) DT(e-3):DA(f7) DA(e-2):DT(f6) DG(e-1):DC(f5) DG(e1):DC(f4) DT(e2):DA(f3) DA(e3):DT(f2) DC(e4):DG(f1) DC(e5):DG(f-1) DT(e6):DA(f-2) DA(e7):DT(f-3) DC(e8):DG(f-4) DG(e9):DC(f-5) DG(e10):DC(f-6) DC(e11):DG(f-7) chaind ( 42) ARG458 0 0 0 0 0 0 0 0 0 0 0 24 35 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 (266) SER1085 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (303) ARG1122 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (356) ILE1175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 23 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyanernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg >5npp_D:Type_II_DNA_topoisomerase; title=2.22A STRUCTURE OF THIOPHENE2 AND GSK945237 WITH S.AUREUS DNA GYRASE AND DNA organism=? DNA sequence DG(A1):DC(C4) DT(A2):DA(C3) DA(A3):DT(C2) DC(A4):DG(C1) DC(A5):DG(F-1) DT(A6):DA(F-2) DA(A7):DT(F-3) DC(A8):DG(F-4) DG(A9):DC(F-5) DG(A10):DC(F-6) DC(A11):DG(F-7) DT(A12):DA(F-8) chainD ( 43) ARG458 0 0 1 0 0 0 0 0 0 0 0 0 ( 45) LYS460 0 0 0 0 4 3 0 0 0 0 0 0 (266) SER1085 0 0 0 0 0 2 0 0 0 0 0 0 (356) ILE1175 0 0 0 0 0 0 0 21 23 0 0 0 prot.sequence gkladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >5nsr_M: title=CRYO-EM STRUCTURE OF RNA POLYMERASE-SIGMA54 HOLO ENZYME WITH PROMOTER DNA CLOSED COMPLEX organism=KLEBSIELLA PNEUMONIAE DNA sequence DT(F71):DA(G-9) DC(F72):DG(G-10) DG(F73):DA(G-11) DT(F74):DC(G-12) DG(F75):DC(G-13) DC(F76):DG(G-14) DA(F77):DT(G-15) DA(F78):DT(G-16) DA(F79):DT(G-17) DA(F80):DT(G-18) DG(F81):DC(G-19) DT(F82):DA(G-20) DC(F83):DG(G-21) DG(F84):DC(G-22) DT(F85):DA(G-23) DG(F86):DC(G-24) DC(F87):DG(G-25) DC(F88):DG(G-26) DA(F89):DT(G-27) DG(F90):DC(G-28) DC(F91):DG(G-29) DC(F92):DG(G-30) DG(F93):DC(G-31) DT(F94):DA(G-32) DC(F95):DG(G-33) chainM ( 5) ALA20 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ALA21 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) SER379 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (353) SER440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (367) ALA454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (369) ARG456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 4 0 0 0 0 0 0 0 0 (370) THR457 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 prot.sequence xxxxXXxxxxxxxxxxxxxxxxxxxxxxxxxxxxqtlqdylmwqveltpftdtdraiatsivdavddtgyltiqiedivdsigddeigleeveavlkriqrfdpvgvaakdlrdclliqlsqfaketpwleearliisdhldllanhdfrtlmrvtrlkeevlkeavnliqsldxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxmgnsarndadgqfirsnlqearwlikslesrndtllrvsrciveqqqaffeqgeeymkpmvladiaqavemheStisrvttqkylhsprgixxxxxxxxxxxxxxxxasstairalvkkliaaenpakplsdSkltsmlseqgimvArRTvakyreslsippsnqr >5nss_GJKMN:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF RNA POLYMERASE-SIGMA54 HOLOENZYME WITH PROMOTER DNA AND TRANSCRIPTION ACTIVATOR PSPF INTERMEDATE COMPLEX organism=ESCHERICHIA COLI K-12 / KLEBSIELLA PNEUMONIAE DNA sequence DG(H66):DG(I0) DC(H67):DT(I-1) DT(H68):DC(I-2) DG(H69):DC(I-3) DA(H70):DC(I-4) DT(H71):DG(I-5) DC(H72):DA(I-6) DG(H73):DA(I-11) DT(H74):DC(I-12) DG(H75):DC(I-13) DC(H76):DG(I-14) DA(H77):DT(I-15) DA(H78):DT(I-16) DA(H79):DT(I-17) DA(H80):DT(I-18) DG(H81):DC(I-19) DT(H82):DA(I-20) DC(H83):DG(I-21) DG(H84):DC(I-22) DT(H85):DA(I-23) DG(H86):DC(I-24) DC(H87):DG(I-25) DC(H88):DG(I-26) DA(H89):DT(I-27) DG(H90):DC(I-28) DC(H91):DG(I-29) DC(H92):DG(I-30) DG(H93):DC(I-31) DT(H94):DA(I-32) DC(H95):DG(I-33) DT(H96):DA(I-34) chainG chainJ chainK chainN chainM ( 5) ALA12 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ALA13 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ALA14 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ALA16 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ALA17 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ALA18 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (367) ARG456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence llgeansflevleqvshlapldkpvliigergtgkeliasrlhylssrwqgpfislncaalnenlldselfgheagaftgaqkrhpgrferadggtlfldelatapmmvqekllrvieygelervggsqplqvnvrlvcatnadlpamvnegtfradlldrlafdvvqlpplreresdimlmaeyfaiqmcreiklplfpgfteraretllnyrwpgnirelknvversvyrhgtsdyplddiiidpfkrr/llgeansflevleqvshlapldkpvliigergtgkeliasrlhylssrwqgpfislncaalnenlldselfgheagaftgaqkrhpgrferadggtlfldelatapmmvqekllrvieygelervggsqplqvnvrlvcatnadlpamvnegtfradlldrlafdvvqlpplreresdimlmaeyfaiqmcreiklplfpgfteraretllnyrwpgnirelknvversvyrhgtsdyplddiiidpfkrr/llgeansflevleqvshlapldkpvliigergtgkeliasrlhylssrwqgpfislncaalnenlldselfgheagaftgaqkrhpgrferadggtlfldelatapmmvqekllrvieygelervggsqplqvnvrlvcatnadlpamvnegtfradlldrlafdvvqlpplreresdimlmaeyfaiqmcreiklplfpgfteraretllnyrwpgnirelknvversvyrhgtsdyplddiiidpf/xxxxXXXxXXXxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxlqdylmwqveltpftdtdraiatsivdavddtgyltiqiedivdsigddeigleeveavlkriqrfdpvgvaakdlrdclliqlsqfaketpwleearliisdhldllanhdfrtlmrvtrlkeevlkeavnliqsldxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxmgnsarrsnlqearwlikslesrndtllrvsrciveqqqaffeqgeeymkpmvladiaqavemhestisrvttqkylhsprgixxxxxxxxxxxxxxxxasstairalvkkliaaenpakplsdskltsmlseqgimvarRtvakyreslsippsnqrkqlv/llgeANSfLEVleqvshlapldkpvliigergtgkeliasrlhylssrwqgpfislncaalnenlldselfgheagaftgaqkrhpgrferadggtlfldelatapmmvqekllrvieygelervggsqplqvnvrlvcatnadlpamvnegtfradlldrlafdvvqlpplreresdimlmaeyfaiqmcreiklplfpgfteraretllnyrwpgnirelknvversvyrhgtsdyplddiiidpfkrr >5nw5_AB:ARM_repeat; title=CRYSTAL STRUCTURE OF THE RIF1 N-TERMINAL DOMAIN (RIF1-NTD) FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH DNA organism=Saccharomyces cerevisiae S288c DNA sequence DT(D1):DA(C30) DT(D2):DA(C29) DT(D3):DA(C28) DT(D4):DA(C27) DT(D5):DA(C26) DT(D6):DA(C25) DT(D7):DA(C24) DT(D8):DA(C23) DT(D9):DA(C22) DT(D10):DA(C21) DT(D11):DA(C20) DT(D12):DA(C19) DT(D13):DA(C18) DT(D14):DA(C17) DT(D15):DA(C16) DT(D16):DA(C15) DT(D17):DA(C14) DT(D18):DA(C13) DT(D19):DA(C12) DT(D20):DA(C11) DT(D21):DA(C10) DT(D22):DA(C9) DT(D23):DA(C8) DT(D24):DA(C7) DT(D26):DA(C6) DT(D27):DA(C5) DT(D28):DA(C3) DT(D29):DA(C2) DT(D30):DA(C1) chainA chainB (1020) ARG1207 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence etrvnpraleywvsgeihglvdnesvsefkeiiegglgilrqesedyvarrfevyatfnniipilttknvnevdqkfnilivniesiieiciphlqiaqdtllsssekknpfvirlyvqivrffsaimsnfkivkwltkrpdlvnklkviyrwttgalrnensnkiiitaqvsflrdekfgtfflsneeikpiistfteimeinshnliyeklllirgflskypklmietvtswlpgevlpriiigdeiysmkilitsivvllellkkcldfvdeheriyqcimlspvcetipekflsklplnsydsanldkvtighlltqqiknyivvkndnkiamdlwlsmtgllydsgkrvydltsesnkvwfdlnnlcfinnhpktrlmsikvwriitycictkisqknqegnksllsllrtpfqmtlpyvndpsaregiiyhllgvvytaftsnknlstdmfelfwdhlitpiyedyvfkydsihlqnvlftvlhlliggknadvalerkhihpmsviasegvklkdisslppqiikreydkimkvvfqavevaisnvnlahdliltslkhlpedrkdqthlesfsslilkvtqnnkdtpifrdffgavtssfvytfldlflrkndsslvnfniqiskvgisqgnmtldllkdvirkarnetsefliiekflelddkktevyaqnwvgstllppnisfrefqslanivnkvpnensienfldlclklsfpvnlftllhvsmwsnnnfiyfiqsyvsknenklnvdlitllktslpgnpelfsgllpflrrnkfmdileycihsnpnllnsipdlnsdlllkllprsrasyfaaniklfkcseqltlvrwllkgqqleqlnqnfseienvlqnasdselekseiirellhlamanpieplfsgllnfciknnmadhldefcgnmtsevlfkispelllklltykekpngkllaaviekiengdddyilellekiiiqkeiqileklkepllvfflnpvssnmqkhkkstnmlrelvllyltkplsrsaakkffsmlisilppnpnyqtidmvnllidlikshnrkfkdkrtynatlktigkwiqesgvvhq/etrvnpraleywvsgeihglvdnesvsefkeiiegglgilrqesedyvarrfevyatfnniipilttknvnevdqkfnilivniesiieiciphlqiaqdtllsssekknpfvirlyvqivrffsaimsnfkivkwltkrpdlvnklkviyrwttgalrnensnkiiitaqvsflrdekfgtfflsneeikpiistfteimeinshnliyeklllirgflskypklmietvtswlpgevlpriiigdeiysmkilitsivvllellkkcldfvdeheriyqcimlspvcetipekflsklplnsydsanldkvtighlltqqiknyivvkndnkiamdlwlsmtgllydsgkrvydltsesnkvwfdlnnlcfinnhpktrlmsikvwriitycictkisqknqegnksllsllrtpfqmtlpyvndpsaregiiyhllgvvytaftsnknlstdmfelfwdhlitpiyedyvfkydsihlqnvlftvlhlliggknadvalekkhihpmsviasegvklkdisslppqiikreydkimkvvfqavevaisnvnlahdliltslkhlpedrkdqthlesfsslilkvtqnnkdtpifrdffgavtssfvytfldlflrkndsslvnfniqiskvgisqgnmtldllkdvirkarnetsefliiekflelddkktevyaqnwvgstllppnisfrefqslanivnkvpnensienfldlclklsfpvnlftllhvsmwsnnnfiyfiqsyvsknenklnvdlitllktslpgnpelfsgllpflrrnkfmdileycihsnpnllnsipdlnsdlllkllprsrasyfaaniklfkcseqltlvrwllkgqqleqlnqnfseienvlqnasdselekseiirellhlamanpieplfsgllnfciknnmadhldefcgnmtsevlfkispelllklltykekpngkllaaviekiengdddyilellekiiiqkeiqileklkepllvfflnpvssnmqkhkkstnmlrelvllyltkplsRsaakkffsmlisilppnpnyqtidmvnllidlikshnrkfkdkrtynatlktigkwiqesgvvhq >5nw5_B:ARM_repeat; title=CRYSTAL STRUCTURE OF THE RIF1 N-TERMINAL DOMAIN (RIF1-NTD) FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH DNA organism=Saccharomyces cerevisiae S288c DNA sequence DT(D1):DA(C30) DT(D2):DA(C29) DT(D3):DA(C28) DT(D4):DA(C27) DT(D5):DA(C26) DT(D6):DA(C25) DT(D7):DA(C24) DT(D8):DA(C23) DT(D9):DA(C22) DT(D10):DA(C21) DT(D11):DA(C20) DT(D12):DA(C19) DT(D13):DA(C18) DT(D14):DA(C17) DT(D15):DA(C16) DT(D16):DA(C15) DT(D17):DA(C14) DT(D18):DA(C13) DT(D19):DA(C12) DT(D20):DA(C11) DT(D21):DA(C10) DT(D22):DA(C9) DT(D23):DA(C8) DT(D24):DA(C7) DT(D26):DA(C6) DT(D27):DA(C5) DT(D28):DA(C3) DT(D29):DA(C2) DT(D30):DA(C1) chainB (1020) ARG1207 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence etrvnpraleywvsgeihglvdnesvsefkeiiegglgilrqesedyvarrfevyatfnniipilttknvnevdqkfnilivniesiieiciphlqiaqdtllsssekknpfvirlyvqivrffsaimsnfkivkwltkrpdlvnklkviyrwttgalrnensnkiiitaqvsflrdekfgtfflsneeikpiistfteimeinshnliyeklllirgflskypklmietvtswlpgevlpriiigdeiysmkilitsivvllellkkcldfvdeheriyqcimlspvcetipekflsklplnsydsanldkvtighlltqqiknyivvkndnkiamdlwlsmtgllydsgkrvydltsesnkvwfdlnnlcfinnhpktrlmsikvwriitycictkisqknqegnksllsllrtpfqmtlpyvndpsaregiiyhllgvvytaftsnknlstdmfelfwdhlitpiyedyvfkydsihlqnvlftvlhlliggknadvalekkhihpmsviasegvklkdisslppqiikreydkimkvvfqavevaisnvnlahdliltslkhlpedrkdqthlesfsslilkvtqnnkdtpifrdffgavtssfvytfldlflrkndsslvnfniqiskvgisqgnmtldllkdvirkarnetsefliiekflelddkktevyaqnwvgstllppnisfrefqslanivnkvpnensienfldlclklsfpvnlftllhvsmwsnnnfiyfiqsyvsknenklnvdlitllktslpgnpelfsgllpflrrnkfmdileycihsnpnllnsipdlnsdlllkllprsrasyfaaniklfkcseqltlvrwllkgqqleqlnqnfseienvlqnasdselekseiirellhlamanpieplfsgllnfciknnmadhldefcgnmtsevlfkispelllklltykekpngkllaaviekiengdddyilellekiiiqkeiqileklkepllvfflnpvssnmqkhkkstnmlrelvllyltkplsRsaakkffsmlisilppnpnyqtidmvnllidlikshnrkfkdkrtynatlktigkwiqesgvvhq >5nwa_A:Phospholipase_D/nuclease; title=CRYSTAL STRUCTURE OF THE COMPLEX OF TDP1 WITH DUPLEX DNA organism=Homo sapiens DNA sequence DA(C-10) DA(C-9) DT(C-8) DG(C-7) DC(C-6) DG(C-5) DC(C-4) DA(C-3) DT(C-2) DT(C-1) DA(C0) chainA ( 45) TYR204 0 0 0 0 0 0 0 0 1 4 0 ( 99) ALA258 0 0 0 0 0 0 0 3 0 0 0 (100) PHE259 0 0 0 0 0 0 0 29 9 0 0 (102) THR261 0 0 0 0 0 0 0 0 1 0 0 (241) SER400 0 0 0 0 0 0 0 0 0 3 0 (299) PRO461 0 0 0 0 0 0 0 0 0 13 0 (373) ARG535 0 0 0 0 0 0 0 6 0 0 0 (423) TRP590 0 0 0 0 0 0 0 0 0 1 0 prot.sequence kgnpfqfyltrvsgvkpkynsgalhikdilsplfgtlvssaqfnYcfdvdwlvkqyppefrkkpillvhgdkreakahlhaqakpyenislcqakldiAFgThhtkmmlllyeeglrvvihtsnlihadwhqktqgiwlsplypriadgthksgespthfkanlisyltaynapslkewidvihkhdlsetnvyligstpgrfqgsqkdnwghfrlkkllkdhassmpnaeswpvvgqfsSvgslgadeskwlcsefkesmltlgkesktssvplyliypsvenvrtslegypaggslPysiqtaekqnwlhsyfhkwsaetsgrsnamphiktymrpspdfskiawflvtsanlskaawgalekngtqlmiRsyelgvlflpsalgldsfkvkqkffpmatfpvpydlppelygskdrpwiWnipyvkapdthgnmwvps >5o63_B:DNA-binding_pseudobarrel_domain; title=CRYSTAL STRUCTURE OF UBALAI RESTRICTION ENDONUCLEASE B3 DOMAIN DOMAIN (MUTANT L24M L53M L95M) WITH COGNATE DNA organism=UNIDENTIFIED DNA sequence DC(F-4):DG(E4) DG(F-3):DC(E3) DC(F-2):DG(E2) DC(F-1):DG(E1) DA(F0):DT(E0) DG(F1):DC(E-1) DG(F2):DC(E-2) DG(F3):DC(E-3) DC(F4):DG(E-4) chainB ( 32) ASN32 0 0 0 11 8 0 0 0 0 ( 37) ARG37 0 0 0 0 0 23 17 8 0 ( 38) HIS38 0 0 0 0 18 11 0 0 0 ( 41) LEU41 0 1 2 0 0 0 0 0 0 ( 84) TYR84 0 0 0 0 7 7 0 0 0 ( 86) ARG86 0 0 9 18 1 0 0 0 0 ( 87) TYR87 0 0 8 11 16 0 0 0 0 ( 89) GLU89 0 0 6 0 0 0 0 0 0 ( 91) ARG91 0 0 0 0 13 3 0 0 0 prot.sequence mnelikyakelvrsagktlksaamfakvltpNddsgRHgvLvpteaysffpdmpisdpsqnatsnfpafdslskthktlaykyYeRYpErRitrmhgllnernydprltiflfarhtdgssgyyfdcansgsggrfevlfalcfgeaispkaglfvvrpid >5o6g_A:Homing_endonucleases; title=STRUCTURES AND DYNAMICS OF MESOPHILIC VARIANTS FROM THE HOMING ENDONUCLEASE I-DMOI organism=Desulfurococcus mucosus DNA sequence DG(B1):DC(C25) DC(B2):DG(C24) DC(B3):DG(C23) DT(B4):DA(C22) DT(B5):DA(C21) DG(B6):DC(C20) DC(B7):DG(C19) DC(B8):DG(C18) DG(B9):DC(C17) DG(B10):DC(C16) DG(B11):DC(C15) DT(B12):DA(C14) DA(B13):DT(C13) DA(B14):DT(C12) DG(B15):DC(C11) DT(B16):DA(C10) DT(B17):DA(C9) DC(B18):DG(C8) DC(B19):DG(C7) DG(B20):DC(C6) DG(B21):DC(C5) DC(B22):DG(C4) DG(B23):DC(C3) DC(B24):DG(C2) DG(B25):DC(C1) chainA ( 21) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 25) TYR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 3 2 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 15 16 5 0 0 ( 30) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 31) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 3 0 0 0 0 ( 33) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 6 1 0 0 0 0 0 ( 35) VAL39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 37) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 ( 68) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 71) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 ( 72) THR76 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 8 17 6 0 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 5 0 0 0 0 0 0 ( 79) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (120) ARG124 0 0 0 0 14 9 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG126 0 0 0 0 0 0 2 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TRP128 0 0 0 0 0 0 0 0 6 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) HIS152 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ASP154 0 0 0 0 0 0 4 9 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ASP155 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG157 0 0 0 0 0 0 0 0 16 16 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) HIS158 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) VAL160 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence envsgisayllgliigdgglYkLkYkgnRSEyRvViTqksenlikqhfaplmqflidelnvkskiQiVkgDTRyElRvSskklyyyfanmqerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntiHlDDhRHgVyvlnislrdrikfvhtilsshlnplppeaaal >5o6i_K:Homing_endonucleases; title=STRUCTURES AND DYNAMICS OF MESOPHILIC VARIANTS FROM THE HOMING ENDONUCLEASE I-DMOI organism=Desulfurococcus mucosus DNA sequence DG(L1):DC(N25) DC(L2):DG(N24) DC(L3):DG(N23) DT(L4):DA(N22) DT(L5):DA(N21) DG(L6):DC(N20) DC(L7):DG(N19) DC(L8):DG(N18) DG(L9):DC(N17) DG(L10):DC(N16) DG(L11):DC(N15) DT(L12):DA(N14) DA(L13):DT(N13) DA(L14):DT(N12) DG(L15):DC(N11) DT(L16):DA(N10) DT(L17):DA(N9) DC(L18):DG(N8) DC(L19):DG(N7) DG(L20):DC(N6) DG(L21):DC(N5) DC(L22):DG(N4) DG(L23):DC(N3) DC(L24):DG(N2) DG(L25):DC(N1) chainK ( 21) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 ( 23) LEU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 25) TYR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 5 2 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 15 5 0 0 ( 30) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 31) GLU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 4 0 0 0 0 ( 33) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 6 1 0 0 0 0 0 ( 35) VAL39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 37) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 66) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 ( 68) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 71) ASP75 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 ( 72) THR76 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 8 15 6 0 0 0 0 0 0 0 0 0 ( 75) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 77) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 4 0 0 0 0 0 0 ( 79) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 (120) ARG124 0 0 0 0 15 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG126 0 0 0 0 0 0 1 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TRP128 0 0 0 0 0 0 0 0 3 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ASP154 0 0 0 0 0 0 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ASP155 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG157 0 0 0 0 0 0 0 0 15 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) HIS158 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) VAL160 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU167 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence envsgisayllgliigdgglYkLkYkgnRSEyRvViTqksenlikqhfaplmqflidelnvkskiQiVkgDTRyElRvSskklyyyftnmlerirlcnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnisLrdrikfvhtilsshln >5o6u_CD:GHMP_Kinase,_C-terminal_domain; title=STRUCTURE OF THE CASCADE-I-FV R-LOOP COMPLEX FROM SHEWANELLA PUTREFACIENS organism=SHEWANELLA PUTREFACIENS CN-32 DNA sequence DG(I1) DG(I2) DT(I3) DT(I4) DA(I5) DT(I6) DA(I7) DG(I8) DG(I9) DT(I10) DT(I11) DT(I12) DG(I13) DC(I14) DG(I15) DG(I16) DA(I17) DC(I18) DG(I19) DG(I20) DG(I21) DG(I22) DC(I23) DC(I24) DG(I25) DG(I26) DG(I27) chainC ( 88) VAL120 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) PRO122 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) GLN125 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 27) PRO27 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) VAL38 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ASN40 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR42 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) LYS127 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) THR158 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) SER159 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) PHE160 6 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) PHE161 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LYS163 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mqkvtgiksvdfkikalghgvvnwngpttdnhtlpklrgytnltgkqatdinfketplyisqncirhhlfrelknvlasitglirgyVvPssQckrtspllledfvdqlgngnfkttfgdteyisygsisieqlqfisldkkfdraamvikegegeviaaelqnyiqslnpslnpqaifhsnyvrrgtifeegecgillnddavkalvaetlerlanlsirqakgymyvdditvdyndshkmmrikrdeseiineqhapfaqyfyak/mqkvtgiksvdfkikalghgvvnwngPttltgddgktVdNhTlpklrgytnltgkvkdetgykykkqatdinfketplyisqncirhhlfreqafdlhyasdknlknvlasitglirgyvvpssqcKrtspllledfvdqlgngnfeqygqagardsTSFFsKttfgdteyisygsisieqlqfisldkkfdraamvikegegeviaaelqnyiqslnpslnpqaifhsnyvrrgtifeegecgillnddavkalvaetlerlanlsirqakgymyvdditvdyndshkmmrikrdeseiineqhapfaqyfyak >5o6u_EF:GHMP_Kinase,_C-terminal_domain; title=STRUCTURE OF THE CASCADE-I-FV R-LOOP COMPLEX FROM SHEWANELLA PUTREFACIENS organism=SHEWANELLA PUTREFACIENS CN-32 DNA sequence DG(I16):DC(H13) DA(I17):DT(H12) DC(I18):DG(H11) DG(I19):DC(H10) DG(I20):DC(H9) DG(I21):DC(H8) DG(I22):DC(H7) DC(I23):DG(H6) DC(I24):DG(H5) DG(I25):DC(H4) DG(I26):DC(H2) chainE chainF (110) SER110 4 0 0 0 0 0 0 0 0 0 0 (111) THR111 1 0 0 0 0 0 0 0 0 0 0 (251) THR251 9 0 0 0 0 0 0 0 0 0 0 (253) LYS253 8 0 0 0 0 0 0 0 0 0 0 (254) ASP254 5 7 0 0 0 0 0 0 0 0 0 (264) LYS264 0 1 0 0 0 0 0 0 0 0 0 prot.sequence mqkvtgiksvdfkikalghgvvnwngpttltgddgktvdnhtlpklrgytnltgkvkdetgykykkqatdinfketplyisqncirhhlfreqafdlhyasdknlknvlasitglirgyvvpssqckrtspllledfvdqlgngnfeqygqagardstsffskttfgdteyisygsisieqlqfisldkkfdraamvikegegeviaaelqnyiqslnpslnpqaifhsnyvrrgtifeegecgillnddavkalvaetlerlanlsirqakgymyvdditvdyndshkmmrikrdeseiineqhapfaqyfyak/mkiiieydscwrnaflggsnnepvpkkgreflgsmtslkkegnfkvcentldtvmgvlnrligdqrklyqarskmyesayyfealedkvsfidkpqltneisfirnmngSTdqnaftgmikvsdpvftseysqqfwgvlaldftqlcdfiikqsqvvgsielnplsiinrleslnqekalensddlaqvlkvlneyfpdieylnnkglitpisiycsalylqlarletsfnmttaktkaggisgiskrgfTkKDfmdryttgpKktiwgnpfikkekikgqgevtsmmtkasgqleisidvdrdkaqeikilienagvssfylgkkglayvsnikl >5o7t_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF KLENTAQ MUTANT M747K IN A CLOSED TERNARY COMPLEX WITH A DG:DCTP BASE PAIR organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (248) LYS540 0 0 0 0 0 0 0 4 6 1 0 (281) ARG573 0 0 0 0 0 0 0 0 0 0 3 (288) ASN580 0 0 0 0 0 0 0 0 0 1 0 (291) ASN583 0 0 0 0 0 0 0 0 1 10 1 (462) GLN754 0 0 0 0 0 0 0 0 0 0 1 (492) HIS784 0 0 0 0 0 0 0 0 0 0 1 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaerkafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >5o9g_E:Histone-fold; title=STRUCTURE OF NUCLEOSOME-CHD1 COMPLEX organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) DT(I73):DA(J-73) DA(I74):DT(J-74) DA(I75):DT(J-75) DC(I76):DG(J-76) DG(I77):DC(J-77) DA(I78):DT(J-78) DT(I79):DA(J-79) DG(I80):DC(J-80) DC(I81):DG(J-81) DT(I82):DA(J-82) DG(I83):DC(J-83) DG(I84):DC(J-84) DG(I85):DC(J-85) DC(I86):DG(J-86) DA(I87):DT(J-87) DT(I88):DA(J-88) DA(I89):DT(J-89) chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >5o9g_F:Histone-fold; title=STRUCTURE OF NUCLEOSOME-CHD1 COMPLEX organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) DT(I73):DA(J-73) DA(I74):DT(J-74) DA(I75):DT(J-75) DC(I76):DG(J-76) DG(I77):DC(J-77) DA(I78):DT(J-78) DT(I79):DA(J-79) DG(I80):DC(J-80) DC(I81):DG(J-81) DT(I82):DA(J-82) DG(I83):DC(J-83) DG(I84):DC(J-84) DG(I85):DC(J-85) DC(I86):DG(J-86) DA(I87):DT(J-87) DT(I88):DA(J-88) DA(I89):DT(J-89) chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >5o9g_G:Histone-fold; title=STRUCTURE OF NUCLEOSOME-CHD1 COMPLEX organism=? DNA sequence DT(J-89):DA(I89) DA(J-88):DT(I88) DT(J-87):DA(I87) DG(J-86):DC(I86) DC(J-85):DG(I85) DC(J-84):DG(I84) DC(J-83):DG(I83) DA(J-82):DT(I82) DG(J-81):DC(I81) DC(J-80):DG(I80) DA(J-79):DT(I79) DT(J-78):DA(I78) DC(J-77):DG(I77) DG(J-76):DC(I76) DT(J-75):DA(I75) DT(J-74):DA(I74) DA(J-73):DT(I73) DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainG ( 22) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aktrssraglqfpvgrvhrllRkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >5oa1_4ABU: title=RNA POLYMERASE I PRE-INITIATION COMPLEX organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DT(T13):DG(S68) DT(T14):DA(S66) DT(T15):DG(S65) DC(T16):DT(S63) DG(T17):DG(S62) DC(T18):DA(S61) DA(T19):DC(S60) DT(T20):DA(S58) DG(T21):DA(S57) DA(T22):DA(S56) DA(T23):DT(S55) DG(T24):DG(S54) DT(T25):DA(S53) DC(T35):DG(S36) DT(T36):DA(S35) DA(T37):DT(S34) DC(T38):DG(S33) DT(T39):DA(S32) DT(T40):DA(S31) DT(T41):DA(S30) DT(T42):DA(S29) DC(T43):DG(S28) DC(T44):DG(S27) DT(T45):DA(S26) DC(T46):DG(S25) DA(T47):DT(S24) DC(T48):DG(S23) DA(T49):DT(S22) DC(T50):DG(S21) DT(T51):DA(S20) DT(T52):DA(S19) DG(T53):DC(S18) DT(T54):DA(S17) DA(T55):DT(S16) DC(T56):DG(S15) DT(T57):DA(S14) DC(T58):DG(S13) DC(T59):DG(S12) DA(T60):DT(S11) DT(T61):DA(S10) DG(T62):DC(S9) DA(T63):DT(S8) DC(T64):DG(S7) DT(T65):DA(S6) chainA chainB (430) MET451 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (796) ARG817 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU chain4 prot.sequence aaaaaaaaaaaaaaaaaaaaaaa/mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitldisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgfistyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevhensqnqllskvlttsllirdlnddlsklrvifsrlmnafvtiqndvnafidstkaqgvpipgvkqalekkeglfrkhmmgkrvnyaarsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrqptlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavksgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettgtarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnrqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsedeisnsgylgnklsvsveqvsiakpmrkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlMrvnenigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgsffaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnRgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk/icgtdncpsrlwriidgrrtcqyghvmigheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklqlhmtstisilylasthlslpvytcdyikwictpkswriqlpnyyvsilegsislynkialtcgmicqglllklvmqcalppefyfytkqviefeetdirnsnhaelrvlsyfmltinwmlmtidqkiarrklykifpldrthqltfiedlqeryakqtpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhrmn >5od6_A:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD3-MH1 BOUND TO THE GGCGC SITE. organism=Homo sapiens DNA sequence DT(D1):DA(C16) DG(D2):DC(C15) DC(D3):DG(C14) DA(D4):DT(C13) DG(D5):DC(C12) DG(D6):DC(C11) DC(D7):DG(C10) DG(D8):DC(C9) DC(D9):DG(C8) DG(D10):DC(C7) DC(D11):DG(C6) DC(D12):DG(C5) DT(D13):DA(C4) DG(D14):DC(C3) DC(D15):DG(C2) DA(D16):DT(C1) chainA ( 65) ARG74 0 0 0 0 0 0 0 0 0 0 1 12 4 0 0 0 ( 67) GLN76 0 0 0 0 0 0 0 4 8 1 0 0 0 0 0 0 ( 72) LYS81 0 0 0 0 0 0 0 0 4 7 4 1 0 0 0 0 prot.sequence mivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprslDgRlQvshrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvetpv >5odg_A:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD3-MH1 BOUND TO THE GGCT SITE. organism=Homo sapiens DNA sequence DT(E1):DA(D16) DG(E2):DC(D15) DC(E3):DG(D14) DA(E4):DT(D13) DG(E5):DC(D12) DG(E6):DC(D11) DC(E7):DG(D10) DT(E8):DA(D9) DA(E9):DT(D8) DG(E10):DC(D7) DC(E11):DG(D6) DC(E12):DG(D5) DT(E13):DA(D4) chainA ( 65) ARG74 0 0 0 6 13 2 0 0 0 0 0 0 0 ( 67) GLN76 0 0 0 0 0 0 2 8 5 0 0 0 0 ( 70) HIS79 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 72) LYS81 0 0 0 0 1 4 8 6 0 0 0 0 0 prot.sequence mivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvsHrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvetpvl >5oik_ABEZ:Translation_proteins_SH3-like_domain; title=STRUCTURE OF AN RNA POLYMERASE II-DSIF TRANSCRIPTION ELONGATION COMPLEX organism=HOMO SAPIENS / BOS TAURUS DNA sequence DG(T1):DC(N43) DA(T2):DT(N42) DT(T3):DA(N41) DC(T4):DG(N40) DA(T5):DT(N39) DA(T6):DT(N38) DG(T7):DC(N37) DC(T8):DG(N36) DT(T9):DA(N35) DC(T10):DG(N34) DA(T11):DT(N33) DA(T12):DT(N32) DG(T13):DC(N31) DT(T14):DA(N30) DA(T15):DT(N29) DC(T16):DG(N28) DT(T17):DA(N27) DT(T18):DA(N26) DA(T19):DA(N25) DA(T20):DG(N24) DG(T21):DT(N23) DC(T22):DT(N22) DC(T23):DA(N21) DT(T24):DT(N20) DG(T25):DG(N19) DG(T26):DA(N18) DT(T27):DT(N17) DC(T28):DC(N16) DT(T29):DT(N15) DA(T30):DT(N14) DT(T31):DA(N13) DA(T32):DT(N12) DC(T33):DG(N11) DT(T34):DA(N10) DA(T35):DT(N9) DG(T36):DC(N8) DT(T37):DA(N7) DA(T38):DT(N6) DC(T39):DG(N5) DT(T40):DA(N4) DG(T41):DC(N3) DC(T42):DG(N2) DC(T43):DG(N1) chainA (139) LYS149 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (417) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (810) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (811) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (173) MET200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) ASP386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (364) LYS391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (462) ILE489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (465) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) PRO498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainZ prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlcKgknicehggcgryqprirrsglelyaewkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitrhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekMatntvyvfakkdskyaytgecRsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddRDhygnKrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspIgrDgklakPrqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedelegtnrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdgldqtleefkaqfggkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriQagdpvaryfgikrgqvvkiirPsetagryityrlvq/dpnlwtvkckigeerataislmrkfiayqftdtplqiksvvapehvkgyiyveaykqthvkqaiegvgnlrlgywnqqmvpikemtdvlkvvkevanlkpkswvrlkrgiykddiaqvdyvepsqntislkmipridydrikappqrlfdaekirslggdvasdgdflifegNrysrkgflfksfamsavitegVkptlselekfrehnfqpgdnvevcegelinlqgkilsvdgnkitimpkhedlkdmlefpaqelrkyfkmgdhvkviagrfegdtglivrveenfvilfsdltmhelkvlprdlqlcsetasgvdvggqhewgelvqldpqtvgvivrleretfqvlnmygkvVTvrhqAvtrkkdnrfavaldseqnnihvkdivkvidgphsgregeirhlfrsfaflhckklvenggmfvcktrhlvlaneligqtvrisqgpykgyigvvkdaTesTarvelHstcqtisvdrqrlttvg >5ola_ABE:Ribonuclease_H-like; title=STRUCTURE OF MITOCHONDRIAL TRANSCRIPTION ELONGATION COMPLEX IN COMPLEX WITH ELONGATION FACTOR TEFM organism=HOMO SAPIENS DNA sequence DG(T-12):DC(N3) DT(T-11):DA(N2) DT(T-10):DA(N1) DC(T-9):DG(N0) DG(T-8):DC(N-1) DT(T-7):DA(N-2) DC(T-6):DG(N-3) DT(T-5):DA(N-4) DG(T-4):DC(N-5) DG(T-3):DC(N-6) DC(T-2):DG(N-7) DG(T-1):DC(N-8) DT(T0):DA(N-9) DG(T1):DA(N-18) DC(T2):DT(N-19) DG(T3):DG(N-20) DC(T4):DT(N-21) DG(T5):DG(N-22) DC(T6):DG(N-23) DC(T7):DT(N-24) DG(T8):DA(N-25) chainA chainB chainE (276) GLN493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (539) ARG759 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (554) SER774 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (558) GLU778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (583) ARG803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (585) ARG805 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (587) TYR807 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (772) GLN992 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (776) THR996 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (779) TYR999 0 0 0 0 0 0 0 0 0 0 0 0 3 53 0 0 0 0 0 0 0 (781) VAL1001 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (784) TYR1004 0 0 0 0 0 0 0 0 0 0 0 51 4 0 0 0 0 0 0 0 0 (789) GLN1009 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 (806) TRP1026 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (872) ARG1113 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (884) HIS1125 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 prot.sequence penrflrkllkpdiererlkavnsiisivfgtrriawahldrkltvldwqqsdrwslmrgiysssvyleeissiiskmpkadfyvlektglsiqnsslfpillhfhimeamlyallnktfaqdgqhqvlsmnrnavgkhfelmigdsrtsgkelvkqflfdsilkadprvffpsdkivhyrqmflstelqrveelydsllqaiafyelavfd/lrkllkpdiererlkavnsiisivfgtrriawahldrkltvldwqqsdrwslmrgiysssvyleeissiiskmpkadfyvlektglsiqnsslfpillhfhimeamlyallnktfaqdgqhqvlsmnrnavgkhfelmigdsrtsgkelvkqflfdsilkadprvffpsdkivhyrqmflstelqrveelydsllqaiafyelavfd/qlsgqqqrllaffkcclltdqlplahhllvvhhgqrqkrklltldmynavmlgwarqgafkelvyvlfmvkdagltpdllsyaaalqcmgrqdqdagtiercleqmsqeglklqalftavllseedratvlkavhkvkptfslppqlpppvntskllrdvyakdgrvsypklhlplktlqclfekqlhmelasrvcvvsvekptlpskevkharktlktlrdqwekalcralretknrlerevyegrfslypflcllderevvrmllqvlqalpaQgesfttlarelsartfsrhvvqrqrvsgqvqalqnhyrkylcllasdaevpepclprqywealgapealreqpwplpvqmelgkllaemlvqatqmpcsldrssrlvpvlyhvysfrnvqqigilkphpayvqllekaaeptltfeavdvpmlcpplpwtsphsgafllsptklmrtvegatqhqelletcpptalhgaldaltqlgncawrvngrvldlvlqlfqakgcpqlgvpappseapqppeahlphsaaparkaelRrelahcqkvaremhSlraEalyrlslaqhlrdrvfwlphnmdfRgRtYpcpphfnhlgsdvarallefaqgrplgphgldwlkihlvnltglkkreplrkrlafaeevmddildsadqpltgrkwwmgaeepwqtlaccmevanavrasdpaayvshlpvhqdgscnglqhyaalgrdsvgaasvnlepsdvpqdvysgvaaqvevfrrqdaqrgmrvaqvlegfitrkvvkQtvmTvvYgVtrYggrlQiekrlrelsdfpqefvWeashylvrqvfkslqemfsgtraiqhwltesarlishmgsvvewvtplgvpviqpyrldsrkpntRkqkngfppnfiHsldsshmmltalhcyrkgltfvsvhdcywthaadvsvmnqvcreqfvrlhsepilqdlsrflvkrfcsepqkileasqlketlqavpkpgafdleqvkrstyffs >5ola_C:Ribonuclease_H-like; title=STRUCTURE OF MITOCHONDRIAL TRANSCRIPTION ELONGATION COMPLEX IN COMPLEX WITH ELONGATION FACTOR TEFM organism=HOMO SAPIENS DNA sequence DA(G-25):DG(I8) DT(G-24):DC(I7) DG(G-23):DC(I6) DG(G-22):DG(I5) DT(G-21):DC(I4) DG(G-20):DG(I3) DT(G-19):DC(I2) DA(G-18):DG(I1) DA(G-9):DT(I0) DC(G-8):DG(I-1) DG(G-7):DC(I-2) DC(G-6):DG(I-3) DC(G-5):DG(I-4) DA(G-4):DT(I-5) DG(G-3):DC(I-6) DA(G-2):DT(I-7) DC(G-1):DG(I-8) DG(G0):DC(I-9) DA(G1):DT(I-10) DA(G2):DT(I-11) DC(G3):DG(I-12) chainC ( 8) LYS153 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence penrflrKllkpdiererlkavnsiisivfgtrriawahldrkltvldwqqsdrwslmrgiysssvyleeissiiskmpkadfyvlektglsiqnsslfpillhfhimeamlyallnktfaqdgqhqvlsmnrnavgkhfelmigdsrtsgkelvkqflfdsilkadprvffpsdkivhyrqmflstelqrveelydsllqaiafyelavfd >5ola_CDF:Ribonuclease_H-like; title=STRUCTURE OF MITOCHONDRIAL TRANSCRIPTION ELONGATION COMPLEX IN COMPLEX WITH ELONGATION FACTOR TEFM organism=HOMO SAPIENS DNA sequence DA(G-25):DG(I8) DT(G-24):DC(I7) DG(G-23):DC(I6) DG(G-22):DG(I5) DT(G-21):DC(I4) DG(G-20):DG(I3) DT(G-19):DC(I2) DA(G-18):DG(I1) DA(G-9):DT(I0) DC(G-8):DG(I-1) DG(G-7):DC(I-2) DC(G-6):DG(I-3) DC(G-5):DG(I-4) DA(G-4):DT(I-5) DG(G-3):DC(I-6) DA(G-2):DT(I-7) DC(G-1):DG(I-8) DG(G0):DC(I-9) DA(G1):DT(I-10) DA(G2):DT(I-11) DC(G3):DG(I-12) chainC ( 8) LYS153 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainF (276) GLN493 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (554) SER774 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (558) GLU778 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (583) ARG803 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (585) ARG805 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (587) TYR807 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (772) GLN992 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR996 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (779) TYR999 0 0 0 0 0 0 0 51 2 0 0 0 0 0 0 0 0 0 0 0 0 (781) VAL1001 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (784) TYR1004 0 0 0 0 0 0 0 0 9 41 0 0 0 0 0 0 0 0 0 0 0 (789) GLN1009 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 (884) HIS1125 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence penrflrKllkpdiererlkavnsiisivfgtrriawahldrkltvldwqqsdrwslmrgiysssvyleeissiiskmpkadfyvlektglsiqnsslfpillhfhimeamlyallnktfaqdgqhqvlsmnrnavgkhfelmigdsrtsgkelvkqflfdsilkadprvffpsdkivhyrqmflstelqrveelydsllqaiafyelavfd/lrkllkpDiererlkavnsiisivfgtrriawahldrkltvldwqqsdrwslmrgiysssvyleeissiiskmpkadfyvlektglsiqnsslfpillhfhimeamlyallnktfaqdgqhqvlsmnrnavgkhfelmigdsrtsgkelvkqflfdsilkadprvffpsdkivhyrqmflstelqrveelydsllqaiafyelavfd/qlsgqqqrllaffkcclltdqlplahhllvvhhgqrqkrklltldmynavmlgwarqgafkelvyvlfmvkdagltpdllsyaaalqcmgrqdqdagtiercleqmsqeglklqalftavllseedratvlkavhkvkptfslppqlpppvntskllrdvyakdgrvsypklhlplktlqclfekqlhmelasrvcvvsvekptlpskevkharktlktlrdqwekalcralretknrlerevyegrfslypflcllderevvrmllqvlqalpaQgesfttlarelsartfsrhvvqrqrvsgqvqalqnhyrkylcllasdaevpepclprqywealgapealreqpwplpvqmelgkllaemlvqatqmpcsldrssrlvpvlyhvysfrnvqqigilkphpayvqllekaaeptltfeavdvpmlcpplpwtsphsgafllsptklmrtvegatqhqelletcpptalhgaldaltqlgncawrvngrvldlvlqlfqakgcpqlgvpappseapqppeahlphsaaparkaelrrelahcqkvaremhSlraEalyrlslaqhlrdrvfwlphnmdfRgRtYpcpphfnhlgsdvarallefaqgrplgphgldwlkihlvnltglkkreplrkrlafaeevmddildsadqpltgrkwwmgaeepwqtlaccmevanavrasdpaayvshlpvhqdgscnglqhyaalgrdsvgaasvnlepsdvpqdvysgvaaqvevfrrqdaqrgmrvaqvlegfitrkvvkQtvmTvvYgVtrYggrlQiekrlrelsdfpqefvweashylvrqvfkslqemfsgtraiqhwltesarlishmgsvvewvtplgvpviqpyrldsrkpntrkqkngfppnfiHsldsshmmltalhcyrkgltfvsvhdcywthaadvsvmnqvcreqfvrlhsepilqdlsrflvkrfcsepqkileasqlketlqavpkpgafdleqvkrstyffs >5omf_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CLOSED, TERNARY STRUCTURE OF KOD DNA POLYMERASE organism=? DNA sequence DG(P1):DC(T16) DA(P2):DT(T15) DC(P3):DG(T14) DC(P4):DG(T13) DA(P5):DT(T12) DC(P6):DG(T11) DG(P7):DC(T10) DG(P8):DC(T9) DC(P9):DG(T8) DC(P10):DG(T7) DA(P11):DT(T6) DC(P12):DG(T5) chainA (494) TYR494 0 0 0 0 0 0 0 0 0 0 0 1 (592) LYS592 0 0 0 0 0 0 0 0 0 8 6 0 (612) ARG612 0 0 0 0 0 0 0 5 7 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslYpsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqraikilansyYgyygyararwyckecaesvtawgreyitmtikeieekygfkviysdTdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklviheqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdptkhkydaeyyienqvlpaverilrafgyrkedlr >5omq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF 9N DNA POLYMERASE IN THE REPLICATIVE STATE WITH THREE METAL IONS IN THE ACTIVE SITE organism=Thermococcus sp. (strain 9oN-7) / Thermococcus sp. (strain 9oN-7) DNA sequence DG(P1):DC(T16) DA(P2):DT(T15) DC(P3):DG(T14) DC(P4):DG(T13) DA(P5):DT(T12) DC(P6):DG(T11) DG(P7):DC(T10) DG(P8):DC(T9) DC(P9):DG(T8) DC(P10):DG(T7) DA(P11):DT(T6) DC(P12):DG(T5) chainA (494) TYR494 0 0 0 0 0 0 0 0 0 0 0 2 (592) LYS592 0 0 0 0 0 0 0 0 0 8 7 0 (612) ARG612 0 0 0 0 0 0 0 5 7 0 0 0 prot.sequence mildtdyitengkpvirvfkkengefkieydrtfepyfyallkddsaiedvkkvtakrhgtvvkvkraekvqkkflgrpievwklyfnhpqdvpairdrirahpavvdiyeydipfakrylidkglipmegdeeltmlafaiatlyhegeefgtgpilmisyadgsearvitwkkidlpyvdvvstekemikrflrvvrekdpdvlityngdnfdfaylkkrceelgikftlgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgkpkekvyaeeiaqawesgeglervarysmedakvtyelgreffpmeaqlsrligqslwdvsrsstgnlvewfllrkaykrnelapnkpderelarrrggyaggyvkeperglwdnivyldfrslYpsiiithnvspdtlnregckeydvapevghkfckdfpgfipsllgdlleerqkikrkmkatvdplekklldyrqraikilansfYgyygyakarwyckecaesvtawgreyiemvireleekfgfkvlyadTdglhatipgadaetvkkkakeflkyinpklpglleleyegfyvrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleailkhgdveeavrivkevteklskyevppeklviheqitrdlrdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipadefdptkhrydaeyyienqvlpaverilkafgyrkedlryq >5omv_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TERNARY COMPLEX OF 9N DNA POLYMERASE IN THE REPLICATIVE STATE WITH TWO METAL IONS IN THE ACTIVE SITE organism=Thermococcus sp. 9oN-7 DNA sequence DG(T5):DC(P12) DT(T6):DA(P11) DG(T7):DC(P10) DG(T8):DC(P9) DC(T9):DG(P8) DC(T10):DG(P7) DG(T11):DC(P6) DT(T12):DA(P5) DG(T13):DC(P4) DG(T14):DC(P3) DT(T15):DA(P2) DC(T16):DG(P1) chainA (494) TYR494 2 0 0 0 0 0 0 0 0 0 0 0 (592) LYS592 0 6 7 0 0 0 0 0 0 0 0 0 (612) ARG612 0 0 0 7 5 0 0 0 0 0 0 0 prot.sequence mildtdyitengkpvirvfkkengefkieydrtfepyfyallkddsaiedvkkvtakrhgtvvkvkraekvqkkflgrpievwklyfnhpqdvpairdrirahpavvdiyeydipfakrylidkglipmegdeeltmlafaiatlyhegeefgtgpilmisyadgsearvitwkkidlpyvdvvstekemikrflrvvrekdpdvlityngdnfdfaylkkrceelgikftlgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgkpkekvyaeeiaqawesgeglervarysmedakvtyelgreffpmeaqlsrligqslwdvsrsstgnlvewfllrkaykrnelapnkpderelarrrggyaggyvkeperglwdnivyldfrslYpsiiithnvspdtlnregckeydvapevghkfckdfpgfipsllgdlleerqkikrkmkatvdplekklldyrqraikilansfYgyygyakarwyckecaesvtawgreyiemvireleekfgfkvlyadTdglhatipgadaetvkkkakeflkyinpklpglleleyegfyvrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleailkhgdveeavrivkevteklskyevppeklviheqitrdlrdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipadefdptkhrydaeyyienqvlpaverilkafgyrkedlryq >5omx_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=X-RAY STRUCTURE OF THE H2A-N38C NUCLEOSOME CORE PARTICLE organism=XENOPUS LAEVIS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 2) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllRkgcyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/trkesyaiyvykvlkqvhpdtGisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgcyaervGagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/rktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5ond_B:N-utilization_substance_G_protein_NusG,_N-terminal_domain; title=RFAH FROM ESCHERICHIA COLI IN COMPLEX WITH OPS DNA organism=Escherichia coli DNA sequence DG(D1):DC(D9) DC(D2):DG(D7) DG(D3):DA(D6) chainB ( 10) LYS10 0 0 11 ( 71) ALA71 0 0 1 prot.sequence mqswyllycKrgqlqraqehlerqavnclapmitlekivrgkrtavseplfpnylfvefdpevihtttinAtrgvshfvrfgaspaivpsavihqlsvtegafegfqaiftepdgearsmlllnlinkeikhs >5ong_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=X-RAY CRYSTAL STRUCTURE OF A NUCLEOSOME CORE PARTICLE WITH ITS DNA SITE-SPECIFICALLY CROSSLINKED TO THE HISTONE OCTAMER organism=XENOPUS LAEVIS DNA sequence DT(I-72):DT(J73) DC(I-71):DA(J72) DC(I-70):DG(J71) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DG(I-58):DC(J58) DT(I-57):DA(J57) DC(I-56):DG(J56) DC(I-55):DG(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DG(I55):DC(J-55) DG(I56):DC(J-56) DA(I57):DT(J-57) DC(I58):DG(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DG(I71):DC(J-70) DA(I72):DC(J-71) DT(I73):DT(J-72) chainA ( 1) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 8) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence HcyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger/niqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraGlqfpvgrvhrllRkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/hcYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirgera/rkVlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflEnvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akTrssraglqfpvgrvhrllrkgnyAervgagapvylaavleyLtaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5onw_A:Histone-fold; title=X-RAY CRYSTAL STRUCTURE OF A NUCLEOSOME CORE PARTICLE WITH ITS DNA SITE-SPECIFICALLY CROSSLINKED TO THE HISTONE OCTAMER AND THE TWO H2A/H2B DIMERS CROSSLINKED VIA H2A N38C organism=? DNA sequence DT(I-72):DT(J73) DC(I-71):DA(J72) DC(I-70):DG(J71) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DG(I-58):DC(J58) DT(I-57):DA(J57) DC(I-56):DG(J56) DC(I-55):DG(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DG(I55):DC(J-55) DG(I56):DC(J-56) DA(I57):DT(J-57) DC(I58):DG(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DG(I71):DC(J-70) DA(I72):DC(J-71) DT(I73):DT(J-72) chainA ( 3) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hcYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger >5onw_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=X-RAY CRYSTAL STRUCTURE OF A NUCLEOSOME CORE PARTICLE WITH ITS DNA SITE-SPECIFICALLY CROSSLINKED TO THE HISTONE OCTAMER AND THE TWO H2A/H2B DIMERS CROSSLINKED VIA H2A N38C organism=XENOPUS LAEVIS DNA sequence DT(J-72):DT(I73) DC(J-71):DA(I72) DC(J-70):DG(I71) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DG(J-58):DC(I58) DT(J-57):DA(I57) DC(J-56):DG(I56) DC(J-55):DG(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DG(J55):DC(I-55) DG(J56):DC(I-56) DA(J57):DT(I-57) DC(J58):DG(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DG(J71):DC(I-70) DA(J72):DC(I-71) DT(J73):DT(I-72) chainA ( 3) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 8) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 1) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 1) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hcYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger/niqgitkPairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraGlqfpvgrvhrllrkgcyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/Rrktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/hcYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirge/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgcyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5oqj_7AMOQRU:P-loop_containing_nucleoside_triphosphate_hydrolases;Cyclin-like;Zinc_beta-ribbon;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain; title=STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH organism=? DNA sequence DT(N10):DA(T97) DA(N11):DT(T96) DG(N12):DC(T95) DC(N13):DG(T94) DA(N14):DT(T93) DC(N15):DG(T92) DG(N16):DC(T91) DC(N17):DG(T90) DT(N18):DA(T89) DG(N19):DC(T88) DT(N20):DA(T87) DG(N21):DC(T86) DT(N22):DA(T85) DA(N23):DT(T84) DT(N24):DA(T83) DA(N25):DT(T82) DT(N26):DA(T81) DA(N27):DT(T80) DA(N28):DT(T79) DT(N29):DA(T78) DA(N30):DT(T77) DG(N31):DC(T76) DC(N32):DG(T75) DT(N33):DA(T74) DA(N34):DT(T73) DT(N35):DA(T72) DG(N36):DC(T71) DG(N37):DC(T70) DA(N38):DT(T69) DA(N39):DT(T68) DC(N44):DG(T67) DG(N45):DC(T66) DC(N54):DG(T53) DC(N55):DG(T52) DG(N56):DC(T51) DA(N57):DT(T50) DT(N58):DA(T49) DG(N59):DC(T48) DT(N60):DA(T47) DG(N61):DC(T46) DT(N62):DA(T45) DG(N63):DC(T44) DT(N64):DA(T43) DT(N65):DA(T42) DG(N66):DC(T41) DT(N67):DA(T40) DA(N68):DT(T39) DC(N69):DG(T38) DA(N70):DT(T37) DT(N71):DA(T36) DA(N72):DT(T35) DC(N73):DG(T34) DA(N74):DT(T33) DT(N75):DA(T32) DA(N76):DT(T31) DA(N77):DT(T30) DA(N78):DT(T29) DA(N79):DT(T28) DA(N80):DT(T27) DT(N81):DA(T26) DA(N82):DT(T25) DT(N83):DA(T24) DC(N84):DG(T23) DA(N85):DT(T22) DT(N86):DA(T21) DA(N87):DT(T20) DG(N88):DC(T19) DC(N89):DG(T18) DA(N90):DT(T17) DC(N91):DG(T16) DA(N92):DT(T15) DA(N93):DT(T14) chainA chainM chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR chainU chain7 prot.sequence rpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflxxxxxxxxxxxxxxxxxxxxxxxxxxlvvstysmvanxxxxxxxxxxxxxxxxxxxwgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeanwmelsqkghianvqcaevwcpmtaefyqeylretarkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpqqermnilqnfqyndqintiflskvgdtsidlpeatcliqisshygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmenipnlayasprerrellqevllkneea/gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpsrggcgntqptirkdglklvgswkkpelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvk/pnlnivltcpeckvyppkiverfsegdvvcalcglvlsdklvdtrsewrtfnplldgnnlstrigkgettdmrftkelnkaqgknvmdkkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktkefgktlnimknilrgksqnltyiprfcshlglpmqvttsaeytakkckeikeiagkspitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdp/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFpgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm/fikrdrmrRnFlrmreynefplraipkedlenmrthllKfqskkkinpvtdfhLpVrlhrkRkTrqlkvldenakklrfeefypwvmedfyntwvgsyEaGnsdsyvllsveddgsftmipadkvykftArnkyatltideaekRmDk/dldlersnRqVwlvrlpmflaekwrlgkirinkskitlLlnepheydleltkkVvEneyvfTeQtipkktaivgtvchecqvmpyhkiveqrrnivklNnKerittldetvgvtmshtgmsmrsdnsnfLkvmpkkeildylfkLfDeydywSlKglkertrqpeahlkecldkvatlvkkgpyafkytl/snaeasrvYeIivesvvnevredfenagideqtlqdlkNiwqkkltenlmlclYdKvtrtkArWkcslkdgvvtinrndytfqkaqveaewv >5oqj_O:TATA-box_binding_protein-like; title=STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH organism=? DNA sequence DT(T14):DA(N93) DT(T15):DA(N92) DG(T16):DC(N91) DT(T17):DA(N90) DG(T18):DC(N89) DC(T19):DG(N88) DT(T20):DA(N87) DA(T21):DT(N86) DT(T22):DA(N85) DG(T23):DC(N84) DA(T24):DT(N83) DT(T25):DA(N82) DA(T26):DT(N81) DT(T27):DA(N80) DT(T28):DA(N79) DT(T29):DA(N78) DT(T30):DA(N77) DT(T31):DA(N76) DA(T32):DT(N75) DT(T33):DA(N74) DG(T34):DC(N73) DT(T35):DA(N72) DA(T36):DT(N71) DT(T37):DA(N70) DG(T38):DC(N69) DT(T39):DA(N68) DA(T40):DT(N67) DC(T41):DG(N66) DA(T42):DT(N65) DA(T43):DT(N64) DC(T44):DG(N63) DA(T45):DT(N62) DC(T46):DG(N61) DA(T47):DT(N60) DC(T48):DG(N59) DA(T49):DT(N58) DT(T50):DA(N57) DC(T51):DG(N56) DG(T52):DC(N55) DG(T53):DC(N54) DC(T66):DG(N41) DG(T67):DC(N40) DT(T68):DA(N39) DT(T69):DA(N38) DC(T70):DG(N37) DC(T71):DG(N36) DA(T72):DT(N35) DT(T73):DA(N34) DA(T74):DT(N33) DG(T75):DC(N32) DC(T76):DG(N31) DT(T77):DA(N30) DA(T78):DT(N29) DT(T79):DA(N28) DT(T80):DA(N27) DA(T81):DT(N26) DT(T82):DA(N25) DA(T83):DT(N24) DT(T84):DA(N23) DA(T85):DT(N22) DC(T86):DG(N21) DA(T87):DT(N20) DC(T88):DG(N19) DA(T89):DT(N18) DG(T90):DC(N17) DC(T91):DG(N16) DG(T92):DC(N15) DT(T93):DA(N14) DG(T94):DC(N13) DC(T95):DG(N12) DT(T96):DA(N11) DA(T97):DT(N10) chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFpgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm >5oqm_7AMOQRU:P-loop_containing_nucleoside_triphosphate_hydrolases;Cyclin-like;Zinc_beta-ribbon;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain; title=STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH AND CORE MEDIATOR organism=? DNA sequence DT(T14):DA(N93) DT(T15):DA(N92) DG(T16):DC(N91) DT(T17):DA(N90) DG(T18):DC(N89) DC(T19):DG(N88) DT(T20):DA(N87) DA(T21):DT(N86) DT(T22):DA(N85) DG(T23):DC(N84) DA(T24):DT(N83) DT(T25):DA(N82) DA(T26):DT(N81) DT(T27):DA(N80) DT(T28):DA(N79) DT(T29):DA(N78) DT(T30):DA(N77) DT(T31):DA(N76) DA(T32):DT(N75) DT(T33):DA(N74) DG(T34):DC(N73) DT(T35):DA(N72) DA(T36):DT(N71) DT(T37):DA(N70) DG(T38):DC(N69) DT(T39):DA(N68) DA(T40):DT(N67) DC(T41):DG(N66) DA(T42):DT(N65) DA(T43):DT(N64) DC(T44):DG(N63) DA(T45):DT(N62) DC(T46):DG(N61) DA(T47):DT(N60) DC(T48):DG(N59) DA(T49):DT(N58) DT(T50):DA(N57) DC(T51):DG(N56) DG(T52):DC(N55) DG(T53):DC(N54) DC(T66):DG(N41) DG(T67):DC(N40) DT(T68):DA(N39) DT(T69):DA(N38) DC(T70):DG(N37) DC(T71):DG(N36) DA(T72):DT(N35) DT(T73):DA(N34) DA(T74):DT(N33) DG(T75):DC(N32) DC(T76):DG(N31) DT(T77):DA(N30) DA(T78):DT(N29) DT(T79):DA(N28) DT(T80):DA(N27) DA(T81):DT(N26) DT(T82):DA(N25) DA(T83):DT(N24) DT(T84):DA(N23) DA(T85):DT(N22) DC(T86):DG(N21) DA(T87):DT(N20) DC(T88):DG(N19) DA(T89):DT(N18) DG(T90):DC(N17) DC(T91):DG(N16) DG(T92):DC(N15) DT(T93):DA(N14) DG(T94):DC(N13) DC(T95):DG(N12) DT(T96):DA(N11) DA(T97):DT(N10) chainA chainM chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR chainU chain7 prot.sequence rpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflxxxxxxxxxxxxxxxxxxxxxxxxxxlvvstysmvanxxxxxxxxxxxxxxxxxxxwgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeanwmelsqkghianvqcaevwcpmtaefyqeylretarkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpqqermnilqnfqyndqintiflskvgdtsidlpeatcliqisshygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmenipnlayasprerrellqevllkneea/gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpsrggcgntqptirkdglklvgswkkpelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvk/pnlnivltcpeckvyppkiverfsegdvvcalcglvlsdklvdtrsewrtfnplldgnnlstrigkgettdmrftkelnkaqgknvmdkkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktkefgktlnimknilrgksqnltyiprfcshlglpmqvttsaeytakkckeikeiagkspitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdp/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFpgliyrmvkpkivlLiFvsgkivlTgakqreeiyqafeaiypvlsefrkm/fikrdrmrRnFlrmreynefplraipkedlenmrthllKfqskkkinpvtdfhLpVrlhrkRkTrqlkvldenakklrfeefypwvmedfyntwvgsyEaGnsdsyvllsveddgsftmipadkvykftArnkyatxxxxxxxxXxXx/dldlersnRqVwlvrlpmflaekwrlgkirinkskitlLlnepheydleltkkVvEneyvfTeQtipkktaivgtvchecqvmpyhkiveqrrnivklNnKerittldetvgvtmshtgmsmrsdnsnfLkvmpkkeildylfkLfDeydywslKglkertrqpeahlkecldkvatlvkkgpyafkytl/snaeasrvYeIivesvvnevredfenagideqtlqdlkNiwqkkltenlmlclYdKvtrtkArWkcslkdgvvtinrndytfqkaqveaewv >5oqp_AB: title=CRYSTAL STRUCTURE OF THE S. CEREVISIAE CONDENSIN YCG1-BRN1 SUBCOMPLEX BOUND TO DNA (CRYSTAL FORM I) organism=? DNA sequence DG(C1):DC(D18) DA(C2):DT(D17) DT(C3):DA(D16) DG(C4):DC(D15) DT(C5):DA(D14) DG(C6):DC(D13) DT(C7):DA(D12) DA(C8):DT(D11) DG(C9):DC(D10) DC(C10):DG(D9) DT(C11):DA(D8) DA(C12):DT(D7) DC(C13):DG(D6) DA(C14):DT(D5) DC(C15):DG(D4) DA(C16):DT(D3) DT(C17):DA(D2) DC(C18):DG(D1) chainA chainB ( 28) ARG411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 prot.sequence dintkifnsvaevfqkaqgsyaghrkhiavlkkiqskaveqgyedafnfwfdklvtkilplkkneiidrivklvaafiaslerelilakkqnykltndeegifsrfvdqfirhvlrgvespdknvrfrvlqllavimdnigeideslfnllilslnkriydreptvriqavfcltkfqdfeatrtlvasiqndpsaevrraamlnlindnntrpyilerardvnivnrrlvysrilksmgrkcfddiephifdqliewgledrelsvrnackrliahdwlnaldgdliellekldvsrssvcvkaiealfqsrpdilskikfpsiwkdftveiaflfraiylycldnnitemleenfpeasklsehlnhyillryhhnshfdyntlefiieqlsiaaerydysdevgrrsmltvvrnmlalttlseplikigirvmkslsinekdfvtmaieiindirdddiekqkeassativlcltrssymlelvntplteniliaslmdtlitpavrntapnirelgvknlglcclldvklaidnmyilgmcvskgnaslkyialqvivdifsvhgntvvdgegkvdsislhkifykvlknnglpecqviaaeglcklfladvftdddlfetlvlsyfspinssnealvqafafcipvycfshpahqqrmsrtaadillrlcvlwddlqssvipevdreamlkpniifqqllfwtdprnlvnqtgstkkdtvqltflidvlkiyaqiekkeikkmiitninaiflsseqdystlkelleysddiaendnldnvsknaldklrnnlnslieein/sifekdlmayfdenlnrnwrgrehwkvRnkkvleidffktddsfedkvfaskgrtkidmpiknrkndthyllpddfhfstdritrlfikpgqkmsl >5oqp_B: title=CRYSTAL STRUCTURE OF THE S. CEREVISIAE CONDENSIN YCG1-BRN1 SUBCOMPLEX BOUND TO DNA (CRYSTAL FORM I) organism=? DNA sequence DG(C1):DC(D18) DA(C2):DT(D17) DT(C3):DA(D16) DG(C4):DC(D15) DT(C5):DA(D14) DG(C6):DC(D13) DT(C7):DA(D12) DA(C8):DT(D11) DG(C9):DC(D10) DC(C10):DG(D9) DT(C11):DA(D8) DA(C12):DT(D7) DC(C13):DG(D6) DA(C14):DT(D5) DC(C15):DG(D4) DA(C16):DT(D3) DT(C17):DA(D2) DC(C18):DG(D1) chainB ( 28) ARG411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 prot.sequence sifekdlmayfdenlnrnwrgrehwkvRnkkvleidffktddsfedkvfaskgrtkidmpiknrkndthyllpddfhfstdritrlfikpgqkmsl >5orq_A:HCP-like;TPR-like; title=CRYSTAL STRUCTURE OF DESIGNED CPPR-TELO1 IN COMPLEX WITH SSDNA organism=SYNTHETIC CONSTRUCT DNA sequence DT(B1) DT(B2) DA(B3) DG(B4) DG(B5) DG(B6) DT(B7) DT(B8) DA(B9) DG(B10) chainA ( 38) VAL41 4 6 0 0 0 0 0 0 0 0 ( 41) ASN44 0 7 0 0 0 0 0 0 0 0 ( 72) VAL75 0 0 3 0 0 0 0 0 0 0 ( 73) VAL76 0 14 12 0 0 0 0 0 0 0 ( 76) THR79 0 0 7 0 0 0 0 0 0 0 (106) ASN109 0 0 8 0 0 0 0 0 0 0 (107) VAL110 0 0 0 3 0 0 0 0 0 0 (108) VAL111 0 0 16 13 0 0 0 0 0 0 (111) THR114 0 0 0 9 0 0 0 0 0 0 (141) ASP144 0 0 0 11 0 0 0 0 0 0 (142) VAL145 0 0 0 0 3 0 0 0 0 0 (143) VAL146 0 0 0 20 13 0 0 0 0 0 (144) THR147 0 0 0 1 0 0 0 0 0 0 (146) THR149 0 0 0 0 9 0 0 0 0 0 (176) ASP179 0 0 0 0 11 0 0 0 0 0 (177) VAL180 0 0 0 0 0 3 0 0 0 0 (178) VAL181 0 0 0 0 21 15 0 0 0 0 (179) THR182 0 0 0 0 1 0 0 0 0 0 (181) THR184 0 0 0 0 0 10 0 0 0 0 (211) ASP214 0 0 0 0 0 11 0 0 0 0 (213) VAL216 0 0 0 0 0 21 9 0 0 0 (214) THR217 0 0 0 0 0 3 0 0 0 0 (216) ASN219 0 0 0 0 0 0 5 0 0 0 (248) VAL251 0 0 0 0 0 0 12 8 0 0 (251) ASN254 0 0 0 0 0 0 0 6 0 0 (282) VAL285 0 0 0 0 0 0 0 0 2 0 (283) VAL286 0 0 0 0 0 0 0 11 12 0 (286) THR289 0 0 0 0 0 0 0 0 7 0 (287) THR290 0 0 0 0 0 0 0 0 1 0 (316) ASN319 0 0 0 0 0 0 0 0 8 0 (317) VAL320 0 0 0 0 0 0 0 0 0 3 (318) VAL321 0 0 0 0 0 0 0 0 16 12 (321) THR324 0 0 0 0 0 0 0 0 0 9 (351) ASP354 0 0 0 0 0 0 0 0 0 11 (353) VAL356 0 0 0 0 0 0 0 0 0 18 (354) THR357 0 0 0 0 0 0 0 0 0 2 prot.sequence nsvtyntlisglgkagrleealelfeemkekgivpdvVtyNtlisglgkagrleealelfeemkekgivpdVVtyTtlisglgkagrleealelfeemkekgivpNVVtyTtlisglgkagrleealelfeemkekgivpDVVTyTtlisglgkagrleealelfeemkekgivpDVVTyTtlisglgkagrleealelfeemkekgivpDvVTyNtlisglgkagrleealelfeemkekgivpdvVtyNtlisglgkagrleealelfeemkekgivpdVVtyTTlisglgkagrleealelfeemkekgivpNVVtyTtlisglgkagrleealelfeemkekgivpDvVTyttlisglgk >5ot2_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX IN THE PRESENCE OF 3D-NAPHT-A organism=? DNA sequence DA(T10):DT(N7) DC(T11):DG(N6) DT(T12):DA(N5) DA(T13):DT(N4) DC(T14):DG(N3) DT(T15):DA(N2) DT(T16):DA(N1) chainA (1344) ARG1386 0 0 0 0 0 6 0 prot.sequence qqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlnkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvreedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkym >5ot2_AB: title=RNA POLYMERASE II ELONGATION COMPLEX IN THE PRESENCE OF 3D-NAPHT-A organism=? DNA sequence DA(N1):DT(T16) DA(N2):DT(T15) DG(N3):DC(T14) DT(N4):DA(T13) DA(N5):DT(T12) DG(N6):DC(T11) DT(N7):DA(T10) chainA (1344) ARG1386 0 6 0 0 0 0 0 chainB (419) LYS507 2 0 0 0 0 0 0 prot.sequence qqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlnkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvreedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkym/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvlainaktitsglkyalatgnwgeqamssragvsqvlnrytysstlshlrrtntpigrdgKlakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtrmkhgtydkldddgliapgvrvsgedviigkttpiskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >5oxj_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF KLENTAQ MUTANT M747K IN A CLOSED TERNARY COMPLEX WITH A O6-MEG:BENZITP BASE PAIR organism=Thermus aquaticus DNA sequence DC(C205):DDG(B112) DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (248) LYS540 0 0 0 6 4 0 0 0 0 0 0 0 (281) ARG573 12 4 0 0 0 0 0 0 0 0 0 0 (288) ASN580 0 0 1 0 0 0 0 0 0 0 0 0 (291) ASN583 0 2 10 2 0 0 0 0 0 0 0 0 (295) ARG587 4 6 0 0 0 0 0 0 0 0 0 0 (450) ASN750 1 0 0 0 0 0 0 0 0 0 0 0 (454) GLN754 3 0 0 0 0 0 0 0 0 0 0 0 (484) HIS784 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvRtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaerkafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >5oy7_C:Histone-fold; title=STRUCTURE OF THE 4_601_157 TETRANUCLEOSOME (P1 FORM) organism=? DNA sequence DC(g4):DG(h-4) DC(g5):DG(h-5) DC(g6):DG(h-6) DT(g7):DA(h-7) DG(g8):DC(h-8) DG(g9):DC(h-9) DA(g10):DT(h-10) DG(g11):DC(h-11) DA(g12):DT(h-12) DA(g13):DT(h-13) DT(g14):DA(h-14) DC(g15):DG(h-15) DC(g16):DG(h-16) DC(g17):DG(h-17) DG(g18):DC(h-18) DG(g19):DC(h-19) DT(g20):DA(h-20) DG(g21):DC(h-21) DC(g22):DG(h-22) DC(g23):DG(h-23) DG(g24):DC(h-24) DA(g25):DT(h-25) DG(g26):DC(h-26) DG(g27):DC(h-27) DC(g28):DG(h-28) DC(g29):DG(h-29) DG(g30):DC(h-30) DC(g31):DG(h-31) DT(g32):DA(h-32) DC(g33):DG(h-33) DA(g34):DT(h-34) DA(g35):DT(h-35) DT(g36):DA(h-36) DT(g37):DA(h-37) DG(g38):DC(h-38) DG(g39):DC(h-39) DT(g40):DA(h-40) DC(g41):DG(h-41) DG(g42):DC(h-42) DT(g43):DA(h-43) DA(g44):DT(h-44) DG(g45):DC(h-45) DA(g46):DT(h-46) DC(g47):DG(h-47) DA(g48):DT(h-48) DG(g49):DC(h-49) DC(g50):DG(h-50) DT(g51):DA(h-51) DC(g52):DG(h-52) DT(g53):DA(h-53) DA(g54):DT(h-54) DG(g55):DC(h-55) DC(g56):DG(h-56) DA(g57):DT(h-57) DC(g58):DG(h-58) DC(g59):DG(h-59) DG(g60):DC(h-60) DC(g61):DG(h-61) DT(g62):DA(h-62) DT(g63):DA(h-63) DA(g64):DT(h-64) DA(g65):DT(h-65) DA(g66):DT(h-66) DC(g67):DG(h-67) DG(g68):DC(h-68) DC(g69):DG(h-69) DA(g70):DT(h-70) DC(g71):DG(h-71) DG(g72):DC(h-72) DT(g73):DA(h-73) DA(g74):DT(h-74) DC(g75):DG(h-75) DG(g76):DC(h-76) DC(g77):DG(h-77) DG(g78):DC(h-78) DC(g79):DG(h-79) DT(g80):DA(h-80) DG(g81):DC(h-81) DT(g82):DA(h-82) DC(g83):DG(h-83) DC(g84):DG(h-84) DC(g85):DG(h-85) DC(g86):DG(h-86) DC(g87):DG(h-87) DG(g88):DC(h-88) DC(g89):DG(h-89) DG(g90):DC(h-90) DT(g91):DA(h-91) DT(g92):DA(h-92) DT(g93):DA(h-93) DT(g94):DA(h-94) DA(g95):DT(h-95) DA(g96):DT(h-96) DC(g97):DG(h-97) DC(g98):DG(h-98) DG(g99):DC(h-99) DC(g100):DG(h-100) DC(g101):DG(h-101) DA(g102):DT(h-102) DA(g103):DT(h-103) DG(g104):DC(h-104) DG(g105):DC(h-105) DG(g106):DC(h-106) DG(g107):DC(h-107) DA(g108):DT(h-108) DT(g109):DA(h-109) DT(g110):DA(h-110) DA(g111):DT(h-111) DC(g112):DG(h-112) DT(g113):DA(h-113) DC(g114):DG(h-114) DC(g115):DG(h-115) DC(g116):DG(h-116) DT(g117):DA(h-117) DA(g118):DT(h-118) DG(g119):DC(h-119) DT(g120):DA(h-120) DC(g121):DG(h-121) DT(g122):DA(h-122) DC(g123):DG(h-123) DC(g124):DG(h-124) DA(g125):DT(h-125) DG(g126):DC(h-126) DG(g127):DC(h-127) DC(g128):DG(h-128) DA(g129):DT(h-129) DC(g130):DG(h-130) DG(g131):DC(h-131) DT(g132):DA(h-132) DG(g133):DC(h-133) DT(g134):DA(h-134) DC(g135):DG(h-135) DA(g136):DT(h-136) DG(g137):DC(h-137) DA(g138):DT(h-138) DT(g139):DA(h-139) DA(g140):DT(h-140) DT(g141):DA(h-141) DA(g142):DT(h-142) DT(g143):DA(h-143) DA(g144):DT(h-144) DC(g145):DG(h-145) DA(g146):DT(h-146) DT(g147):DA(h-147) DC(g148):DG(h-148) DC(g149):DG(h-149) DT(g150):DA(h-150) DG(g151):DC(h-151) DT(g152):DA(h-152) DG(g153):DC(h-153) DC(g154):DG(h-154) DA(g155):DT(h-155) DG(g156):DC(h-156) DT(g157):DA(h-157) DA(g158):DT(h-158) DC(g159):DG(h-159) DT(g160):DA(h-160) DC(g161):DG(h-161) DC(g162):DG(h-162) DC(g163):DG(h-163) DT(g164):DA(h-164) DG(g165):DC(h-165) DG(g166):DC(h-166) DA(g167):DT(h-167) DG(g168):DC(h-168) DA(g169):DT(h-169) DA(g170):DT(h-170) DT(g171):DA(h-171) DC(g172):DG(h-172) DC(g173):DG(h-173) DC(g174):DG(h-174) DG(g175):DC(h-175) DT(g176):DA(h-176) DG(g177):DC(h-177) DC(g178):DG(h-178) DC(g179):DG(h-179) DG(g180):DC(h-180) DA(g181):DT(h-181) DG(g182):DC(h-182) DG(g183):DC(h-183) DC(g184):DG(h-184) DC(g185):DG(h-185) DG(g186):DC(h-186) DC(g187):DG(h-187) DT(g188):DA(h-188) DC(g189):DG(h-189) DA(g190):DT(h-190) DA(g191):DT(h-191) DT(g192):DA(h-192) DT(g193):DA(h-193) DG(g194):DC(h-194) DG(g195):DC(h-195) DT(g196):DA(h-196) DC(g197):DG(h-197) DG(g198):DC(h-198) DT(g199):DA(h-199) DA(g200):DT(h-200) DG(g201):DC(h-201) DA(g202):DT(h-202) DC(g203):DG(h-203) DA(g204):DT(h-204) DG(g205):DC(h-205) DC(g206):DG(h-206) DT(g207):DA(h-207) DC(g208):DG(h-208) DT(g209):DA(h-209) DA(g210):DT(h-210) DG(g211):DC(h-211) DC(g212):DG(h-212) DA(g213):DT(h-213) DC(g214):DG(h-214) DC(g215):DG(h-215) DG(g216):DC(h-216) DC(g217):DG(h-217) DT(g218):DA(h-218) DT(g219):DA(h-219) DA(g220):DT(h-220) DA(g221):DT(h-221) DA(g222):DT(h-222) DC(g223):DG(h-223) DG(g224):DC(h-224) DC(g225):DG(h-225) DA(g226):DT(h-226) DC(g227):DG(h-227) DG(g228):DC(h-228) DT(g229):DA(h-229) DA(g230):DT(h-230) DC(g231):DG(h-231) DG(g232):DC(h-232) DC(g233):DG(h-233) DG(g234):DC(h-234) DC(g235):DG(h-235) DT(g236):DA(h-236) DG(g237):DC(h-237) DT(g238):DA(h-238) DC(g239):DG(h-239) DC(g240):DG(h-240) DC(g241):DG(h-241) DC(g242):DG(h-242) DC(g243):DG(h-243) DG(g244):DC(h-244) DC(g245):DG(h-245) DG(g246):DC(h-246) DT(g247):DA(h-247) DT(g248):DA(h-248) DT(g249):DA(h-249) DT(g250):DA(h-250) DA(g251):DT(h-251) DA(g252):DT(h-252) DC(g253):DG(h-253) DC(g254):DG(h-254) DG(g255):DC(h-255) DC(g256):DG(h-256) DC(g257):DG(h-257) DA(g258):DT(h-258) DA(g259):DT(h-259) DG(g260):DC(h-260) DG(g261):DC(h-261) DG(g262):DC(h-262) DG(g263):DC(h-263) DA(g264):DT(h-264) DT(g265):DA(h-265) DT(g266):DA(h-266) DA(g267):DT(h-267) DC(g268):DG(h-268) DT(g269):DA(h-269) DC(g270):DG(h-270) DC(g271):DG(h-271) DC(g272):DG(h-272) DT(g273):DA(h-273) DA(g274):DT(h-274) DG(g275):DC(h-275) DT(g276):DA(h-276) DC(g277):DG(h-277) DT(g278):DA(h-278) DC(g279):DG(h-279) DC(g280):DG(h-280) DA(g281):DT(h-281) DG(g282):DC(h-282) DG(g283):DC(h-283) DC(g284):DG(h-284) DA(g285):DT(h-285) DC(g286):DG(h-286) DG(g287):DC(h-287) DT(g288):DA(h-288) DG(g289):DC(h-289) DT(g290):DA(h-290) DC(g291):DG(h-291) DA(g292):DT(h-292) DG(g293):DC(h-293) DA(g294):DT(h-294) DT(g295):DA(h-295) DA(g296):DT(h-296) DT(g297):DA(h-297) DA(g298):DT(h-298) DT(g299):DA(h-299) DA(g300):DT(h-300) DC(g301):DG(h-301) DA(g302):DT(h-302) DT(g303):DA(h-303) DC(g304):DG(h-304) DC(g305):DG(h-305) DT(g306):DA(h-306) DG(g307):DC(h-307) DT(g308):DA(h-308) DG(g309):DC(h-309) DC(g310):DG(h-310) DA(g311):DT(h-311) DG(g312):DC(h-312) DT(g313):DA(h-313) DA(g314):DT(h-314) DC(g315):DG(h-315) DT(g316):DA(h-316) DC(g317):DG(h-317) DC(g318):DG(h-318) DC(g319):DG(h-319) DT(g320):DA(h-320) DG(g321):DC(h-321) DG(g322):DC(h-322) DA(g323):DT(h-323) DG(g324):DC(h-324) DA(g325):DT(h-325) DA(g326):DT(h-326) DT(g327):DA(h-327) DC(g328):DG(h-328) DC(g329):DG(h-329) DC(g330):DG(h-330) DG(g331):DC(h-331) DG(g332):DC(h-332) DG(g333):DC(h-333) DC(g334):DG(h-334) DC(g335):DG(h-335) DG(g336):DC(h-336) DA(g337):DT(h-337) DG(g338):DC(h-338) DG(g339):DC(h-339) DC(g340):DG(h-340) DC(g341):DG(h-341) DG(g342):DC(h-342) DC(g343):DG(h-343) DT(g344):DA(h-344) DC(g345):DG(h-345) DA(g346):DT(h-346) DA(g347):DT(h-347) DT(g348):DA(h-348) DT(g349):DA(h-349) DG(g350):DC(h-350) DG(g351):DC(h-351) DT(g352):DA(h-352) DC(g353):DG(h-353) DG(g354):DC(h-354) DT(g355):DA(h-355) DA(g356):DT(h-356) DG(g357):DC(h-357) DA(g358):DT(h-358) DC(g359):DG(h-359) DA(g360):DT(h-360) DG(g361):DC(h-361) DC(g362):DG(h-362) DT(g363):DA(h-363) DC(g364):DG(h-364) DT(g365):DA(h-365) DA(g366):DT(h-366) DG(g367):DC(h-367) DC(g368):DG(h-368) DA(g369):DT(h-369) DC(g370):DG(h-370) DC(g371):DG(h-371) DG(g372):DC(h-372) DC(g373):DG(h-373) DT(g374):DA(h-374) DT(g375):DA(h-375) DA(g376):DT(h-376) DA(g377):DT(h-377) DA(g378):DT(h-378) DC(g379):DG(h-379) DG(g380):DC(h-380) DC(g381):DG(h-381) DA(g382):DT(h-382) DC(g383):DG(h-383) DG(g384):DC(h-384) DT(g385):DA(h-385) DA(g386):DT(h-386) DC(g387):DG(h-387) DG(g388):DC(h-388) DC(g389):DG(h-389) DG(g390):DC(h-390) DC(g391):DG(h-391) DT(g392):DA(h-392) DG(g393):DC(h-393) DT(g394):DA(h-394) DC(g395):DG(h-395) DC(g396):DG(h-396) DC(g397):DG(h-397) DC(g398):DG(h-398) DC(g399):DG(h-399) DG(g400):DC(h-400) DC(g401):DG(h-401) DG(g402):DC(h-402) DT(g403):DA(h-403) DT(g404):DA(h-404) DT(g405):DA(h-405) DT(g406):DA(h-406) DA(g407):DT(h-407) DA(g408):DT(h-408) DC(g409):DG(h-409) DC(g410):DG(h-410) DG(g411):DC(h-411) DC(g412):DG(h-412) DC(g413):DG(h-413) DA(g414):DT(h-414) DA(g415):DT(h-415) DG(g416):DC(h-416) DG(g417):DC(h-417) DG(g418):DC(h-418) DG(g419):DC(h-419) DA(g420):DT(h-420) DT(g421):DA(h-421) DT(g422):DA(h-422) DA(g423):DT(h-423) DC(g424):DG(h-424) DT(g425):DA(h-425) DC(g426):DG(h-426) DC(g427):DG(h-427) DC(g428):DG(h-428) DT(g429):DA(h-429) DA(g430):DT(h-430) DG(g431):DC(h-431) DT(g432):DA(h-432) DC(g433):DG(h-433) DT(g434):DA(h-434) DC(g435):DG(h-435) DC(g436):DG(h-436) DA(g437):DT(h-437) DG(g438):DC(h-438) DG(g439):DC(h-439) DC(g440):DG(h-440) DA(g441):DT(h-441) DC(g442):DG(h-442) DG(g443):DC(h-443) DT(g444):DA(h-444) DG(g445):DC(h-445) DT(g446):DA(h-446) DC(g447):DG(h-447) DA(g448):DT(h-448) DG(g449):DC(h-449) DA(g450):DT(h-450) DT(g451):DA(h-451) DA(g452):DT(h-452) DT(g453):DA(h-453) DA(g454):DT(h-454) DT(g455):DA(h-455) DA(g456):DT(h-456) DC(g457):DG(h-457) DA(g458):DT(h-458) DT(g459):DA(h-459) DC(g460):DG(h-460) DC(g461):DG(h-461) DT(g462):DA(h-462) DG(g463):DC(h-463) DT(g464):DA(h-464) DG(g465):DC(h-465) DC(g466):DG(h-466) DA(g467):DT(h-467) DG(g468):DC(h-468) DT(g469):DA(h-469) DA(g470):DT(h-470) DC(g471):DG(h-471) DT(g472):DA(h-472) DC(g473):DG(h-473) DC(g474):DG(h-474) DC(g475):DG(h-475) DT(g476):DA(h-476) DG(g477):DC(h-477) DG(g478):DC(h-478) DA(g479):DT(h-479) DG(g480):DC(h-480) DA(g481):DT(h-481) DA(g482):DT(h-482) DT(g483):DA(h-483) DC(g484):DG(h-484) DC(g485):DG(h-485) DC(g486):DG(h-486) DG(g487):DC(h-487) DT(g488):DA(h-488) DG(g489):DC(h-489) DC(g490):DG(h-490) DC(g491):DG(h-491) DG(g492):DC(h-492) DA(g493):DT(h-493) DG(g494):DC(h-494) DG(g495):DC(h-495) DC(g496):DG(h-496) DC(g497):DG(h-497) DG(g498):DC(h-498) DC(g499):DG(h-499) DT(g500):DA(h-500) DC(g501):DG(h-501) DA(g502):DT(h-502) DA(g503):DT(h-503) DT(g504):DA(h-504) DT(g505):DA(h-505) DG(g506):DC(h-506) DG(g507):DC(h-507) DT(g508):DA(h-508) DC(g509):DG(h-509) DG(g510):DC(h-510) DT(g511):DA(h-511) DA(g512):DT(h-512) DG(g513):DC(h-513) DA(g514):DT(h-514) DC(g515):DG(h-515) DA(g516):DT(h-516) DG(g517):DC(h-517) DC(g518):DG(h-518) DT(g519):DA(h-519) DC(g520):DG(h-520) DT(g521):DA(h-521) DA(g522):DT(h-522) DG(g523):DC(h-523) DC(g524):DG(h-524) DA(g525):DT(h-525) DC(g526):DG(h-526) DC(g527):DG(h-527) DG(g528):DC(h-528) DC(g529):DG(h-529) DT(g530):DA(h-530) DT(g531):DA(h-531) DA(g532):DT(h-532) DA(g533):DT(h-533) DA(g534):DT(h-534) DC(g535):DG(h-535) DG(g536):DC(h-536) DC(g537):DG(h-537) DA(g538):DT(h-538) DC(g539):DG(h-539) DG(g540):DC(h-540) DT(g541):DA(h-541) DA(g542):DT(h-542) DC(g543):DG(h-543) DG(g544):DC(h-544) DC(g545):DG(h-545) DG(g546):DC(h-546) DC(g547):DG(h-547) DT(g548):DA(h-548) DG(g549):DC(h-549) DT(g550):DA(h-550) DC(g551):DG(h-551) DC(g552):DG(h-552) DC(g553):DG(h-553) DC(g554):DG(h-554) DC(g555):DG(h-555) DG(g556):DC(h-556) DC(g557):DG(h-557) DG(g558):DC(h-558) DT(g559):DA(h-559) DT(g560):DA(h-560) DT(g561):DA(h-561) DT(g562):DA(h-562) DA(g563):DT(h-563) DA(g564):DT(h-564) DC(g565):DG(h-565) DC(g566):DG(h-566) DG(g567):DC(h-567) DC(g568):DG(h-568) DC(g569):DG(h-569) DA(g570):DT(h-570) DA(g571):DT(h-571) DG(g572):DC(h-572) DG(g573):DC(h-573) DG(g574):DC(h-574) DG(g575):DC(h-575) DA(g576):DT(h-576) DT(g577):DA(h-577) DT(g578):DA(h-578) DA(g579):DT(h-579) DC(g580):DG(h-580) DT(g581):DA(h-581) DC(g582):DG(h-582) DC(g583):DG(h-583) DC(g584):DG(h-584) DT(g585):DA(h-585) DA(g586):DT(h-586) DG(g587):DC(h-587) DT(g588):DA(h-588) DC(g589):DG(h-589) DT(g590):DA(h-590) DC(g591):DG(h-591) DC(g592):DG(h-592) DA(g593):DT(h-593) DG(g594):DC(h-594) DG(g595):DC(h-595) DC(g596):DG(h-596) DA(g597):DT(h-597) DC(g598):DG(h-598) DG(g599):DC(h-599) DT(g600):DA(h-600) DG(g601):DC(h-601) DT(g602):DA(h-602) DC(g603):DG(h-603) DA(g604):DT(h-604) DG(g605):DC(h-605) DA(g606):DT(h-606) DT(g607):DA(h-607) DA(g608):DT(h-608) DT(g609):DA(h-609) DA(g610):DT(h-610) DT(g611):DA(h-611) DA(g612):DT(h-612) DC(g613):DG(h-613) DA(g614):DT(h-614) DT(g615):DA(h-615) DC(g616):DG(h-616) DC(g617):DG(h-617) DT(g618):DA(h-618) DG(g619):DC(h-619) DT(g620):DA(h-620) DG(g621):DC(h-621) DC(g622):DG(h-622) chainC ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence trssraglqfpvgrvhrllRkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >5sva_AZcdfjn:Cyclin-like;Zinc_beta-ribbon;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MEDIATOR-RNA POLYMERASE II PRE-INITIATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(m97):DA(l69) DG(m98):DC(l68) DT(m99):DA(l67) DA(m100):DT(l66) DT(m101):DA(l65) DG(m102):DC(l64) DT(m103):DA(l63) DA(m104):DT(l62) DC(m105):DG(l61) DA(m106):DT(l60) DA(m107):DT(l59) DC(m108):DG(l58) DA(m109):DT(l57) DC(m110):DG(l56) DA(m111):DT(l55) DC(m112):DG(l54) DA(m113):DT(l53) DT(m114):DA(l52) DC(m115):DG(l51) DG(m116):DC(l50) DG(m117):DC(l49) DA(m118):DT(l48) DG(m119):DC(l47) DT(m121):DA(l45) DG(m122):DC(l44) DA(m123):DT(l43) DA(m124):DT(l42) DT(m125):DA(l41) DC(m126):DG(l40) DG(m127):DC(l39) DA(m128):DT(l38) DA(m129):DT(l37) DC(m130):DG(l36) DG(m131):DC(l35) DT(m132):DA(l34) DT(m133):DA(l33) DC(m134):DG(l32) DC(m135):DG(l31) DA(m136):DT(l30) DT(m137):DA(l29) DA(m138):DT(l28) DG(m139):DC(l27) DT(m141):DA(l25) DA(m142):DT(l24) DT(m143):DA(l23) DT(m144):DA(l22) DA(m145):DT(l21) DT(m146):DA(l20) DA(m147):DT(l19) DT(m148):DA(l18) DA(m149):DT(l17) DC(m150):DG(l16) DA(m151):DT(l15) DC(m152):DG(l14) DA(m153):DT(l13) DG(m154):DC(l12) DC(m155):DG(l11) DA(m156):DT(l10) DT(m157):DA(l9) DA(m158):DT(l8) chainA chainZ (166) MET459 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG785 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainc chaind chainf chainj ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ALA101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58 1 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 chainn prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/saviggdnereeedddidavhsfeianesvevvkkrcqeidypvleeydfrndhrnpdldidlkpstqirpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflqwctlqpencavftsdnkemfqtesglvvstysMvantrnrshdsqkvmdfltgrewgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeaianvqcaevwcpmtaefyqeylretarkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpqqermnilqnfqyndqintiflskvgdtsidlpeatcliqisshygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmennlayasprerrellqevlgddadnsvgR/ltcpeckvyppkiverfsegdvvcalcglvlsdklvdtrsewrtfsnddhngddpsrvgeasnplldgnnlstrigkgettdmrftkelnkaqgknvkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfKeiqslihvktkefgktlnimkni/snaeasrvyeiivesvvnevredfenagideqtlqdlkniwqkkltetkvttfswdnqfndylisedgpdenlmlclydkvtrtkarwkcslkdgvvtinrndytfqkaqveaewv/nefplraipkedlenmrthllkfqskkkinpvtdfhlpvrlhrkdtrnlqfqltragnlrrktrqlkvldenakklrfeefypwvmedgyntwvgsyeagnsdsyvllsveddgsftmipadkvykftarnkyatltideaekrmdkks/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFAAvimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm/mvatvkrtIrIktqqhilpevppvenfpvrqwsieivlLDDegkeipatifdkViYhlhptFaNpnrtftdppfrieeqgwggfpldisvfllekageRkIphdlnflqesyevehviqiplnkpllteELaksgstdleklafGlTklnedDlVgvvqmvtdnktpemnvtnnveegefiidlyslpegllkslwdyvk >5sva_Z:P-loop_containing_nucleoside_triphosphate_hydrolases; title=MEDIATOR-RNA POLYMERASE II PRE-INITIATION COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(l8):DA(m158) DA(l9):DT(m157) DT(l10):DA(m156) DG(l11):DC(m155) DC(l12):DG(m154) DT(l13):DA(m153) DG(l14):DC(m152) DT(l15):DA(m151) DG(l16):DC(m150) DT(l17):DA(m149) DA(l18):DT(m148) DT(l19):DA(m147) DA(l20):DT(m146) DT(l21):DA(m145) DA(l22):DT(m144) DA(l23):DT(m143) DT(l24):DA(m142) DA(l25):DT(m141) DC(l27):DG(m139) DT(l28):DA(m138) DA(l29):DT(m137) DT(l30):DA(m136) DG(l31):DC(m135) DG(l32):DC(m134) DA(l33):DT(m133) DA(l34):DT(m132) DC(l35):DG(m131) DG(l36):DC(m130) DT(l37):DA(m129) DT(l38):DA(m128) DC(l39):DG(m127) DG(l40):DC(m126) DA(l41):DT(m125) DT(l42):DA(m124) DT(l43):DA(m123) DC(l44):DG(m122) DA(l45):DT(m121) DC(l47):DG(m119) DT(l48):DA(m118) DC(l49):DG(m117) DC(l50):DG(m116) DG(l51):DC(m115) DA(l52):DT(m114) DT(l53):DA(m113) DG(l54):DC(m112) DT(l55):DA(m111) DG(l56):DC(m110) DT(l57):DA(m109) DG(l58):DC(m108) DT(l59):DA(m107) DT(l60):DA(m106) DG(l61):DC(m105) DT(l62):DA(m104) DA(l63):DT(m103) DC(l64):DG(m102) DA(l65):DT(m101) DT(l66):DA(m100) DA(l67):DT(m99) DC(l68):DG(m98) DA(l69):DT(m97) chainZ (166) MET459 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (469) ARG785 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 prot.sequence saviggdnereeedddidavhsfeianesvevvkkrcqeidypvleeydfrndhrnpdldidlkpstqirpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflqwctlqpencavftsdnkemfqtesglvvstysMvantrnrshdsqkvmdfltgrewgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeaianvqcaevwcpmtaefyqeylretarkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpqqermnilqnfqyndqintiflskvgdtsidlpeatcliqisshygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmennlayasprerrellqevlgddadnsvgR >5swm_A:Ribonuclease_H-like; title=BACILLUS HALODURANS RNASE H MUTANT D132N IN COMPLEX WITH 12-MER FRNA/DNA HYBRID organism=Bacillus halodurans DNA sequence DG(D1) DA(D2) DA(D3) DC(D5) DA(D6) DG(D7) DG(D8) DT(D9) DG(D10) DT(D11) DC(D12) chainA ( 15) ASN77 0 0 0 0 0 1 6 0 0 0 0 ( 43) ASN105 0 0 0 0 0 0 4 6 0 0 0 ( 44) ASN106 0 0 0 0 0 0 0 5 0 0 0 ( 72) GLN134 0 0 0 0 0 0 0 0 0 1 0 ( 73) THR135 0 0 0 0 0 0 0 0 2 0 0 prot.sequence iiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikady >5swm_AB:Ribonuclease_H-like; title=BACILLUS HALODURANS RNASE H MUTANT D132N IN COMPLEX WITH 12-MER FRNA/DNA HYBRID organism=Bacillus halodurans DNA sequence DG(D1) DA(D2) DA(D3) DC(D5) DA(D6) DG(D7) DG(D8) DT(D9) DG(D10) DT(D11) DC(D12) chainA ( 15) ASN77 0 0 0 0 0 1 6 0 0 0 0 ( 43) ASN105 0 0 0 0 0 0 4 6 0 0 0 ( 44) ASN106 0 0 0 0 0 0 0 5 0 0 0 ( 72) GLN134 0 0 0 0 0 0 0 0 0 1 0 ( 73) THR135 0 0 0 0 0 0 0 0 2 0 0 chainB ( 16) ASN77 1 4 0 0 0 0 0 0 0 0 0 ( 44) ASN105 0 1 7 0 0 0 0 0 0 0 0 ( 45) ASN106 0 0 6 0 0 0 0 0 0 0 0 prot.sequence iiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikady/eiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsqtaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadyg >5sww_A:Cytidine_deaminase-like; title=CRYSTAL STRUCTURE OF HUMAN APOBEC3A COMPLEXED WITH SSDNA organism=Homo sapiens DNA sequence DA(E-2) DT(E-1) DC(E0) DG(E1) DG(E2) DG(E3) chainA ( 17) ILE26 2 0 0 0 0 0 ( 19) ARG28 4 0 0 0 0 0 ( 20) HIS29 2 0 0 29 0 0 ( 21) LYS30 0 0 0 9 1 0 ( 22) THR31 0 0 16 0 0 0 ( 45) ASN57 0 0 5 0 0 0 ( 58) HIS70 0 0 25 0 0 0 ( 86) TRP98 0 8 6 0 0 0 (118) TYR130 0 2 13 0 0 0 (119) ASP131 0 14 0 0 0 0 (120) TYR132 0 4 0 0 0 0 prot.sequence rhlmdphiftsnfnngIgRHKTylcyeverldsvkmdqhrgflhNqaknllcgfygrHaalrfldlvpslqldpaqiyrvtwfisWspcfswgcagevraflqenthvrlrifaariYDYdplykealqmlrdagaqvsimtydefkhcwdtfvdhqgcpfqpwdgldehsqalsgrlrailq >5sy7_AB:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HETERODIMERIC NPAS3-ARNT COMPLEX WITH HRE DNA organism=MUS MUSCULUS DNA sequence DC(D3):DG(C20) DG(D4):DC(C19) DA(D5):DT(C18) DC(D6):DG(C17) DC(D7):DG(C16) DC(D8):DG(C15) DG(D9):DC(C14) DC(D10):DG(C13) DA(D11):DT(C12) DC(D12):DG(C11) DG(D13):DC(C10) DT(D14):DA(C9) DA(D15):DT(C8) DC(D16):DG(C7) DG(D17):DC(C6) DC(D18):DG(C5) DA(D19):DT(C4) DG(D20):DC(C3) chainA ( 6) HIS94 0 0 0 0 0 5 6 8 3 0 0 0 0 0 0 0 0 0 ( 7) SER95 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 10) GLU98 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 ( 13) ARG101 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 ( 14) ARG102 0 0 0 0 0 0 0 0 1 9 16 0 0 0 0 0 0 0 chainB ( 5) SER63 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 9) ALA67 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 12) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 ( 13) ARG71 0 0 0 0 0 0 0 0 0 14 9 2 0 0 0 0 0 0 prot.sequence larenHSeiErrRRnkmtayitelsdmvptcsalarkpdkltilrmavshmkslpsfltdqelkhlileaadgflfivscetgrvvyvsdsvtpvlnqpqsewfgstlydqvhpddvdklreqlstssrrsficrmrcgtnglgsvkegephfvvvhctgylvaigrlqvtsspefisrhniegiftfvdhrcvatvgyqpqellgknivefchpedqqllrdsfqqvvklkgqvlsvmfrfrsktrewlwmrtssftfqnpysdeieyiictntn/rkekSrdaArsRRgkenfefyelakllplpaaitsqldkasiirltisylkmrdfanqgdievfeahlgshilqsldgfvfalnqegkflyisetvsiylglsqveltgssvfdyvhpgdhvemaeqlgmlersffirmkstlgykvihitgrlrmglvvvahalphmfvtrvnmdlniiycenrisdymdltpvdivgkrcyhfihaedvegirhshldllnkgqcvtkyyrwmqknggyiwiqssatiakniiwvnyllsnpeykdtpmdiaql >5sy7_B:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HETERODIMERIC NPAS3-ARNT COMPLEX WITH HRE DNA organism=MUS MUSCULUS DNA sequence DC(D3):DG(C20) DG(D4):DC(C19) DA(D5):DT(C18) DC(D6):DG(C17) DC(D7):DG(C16) DC(D8):DG(C15) DG(D9):DC(C14) DC(D10):DG(C13) DA(D11):DT(C12) DC(D12):DG(C11) DG(D13):DC(C10) DT(D14):DA(C9) DA(D15):DT(C8) DC(D16):DG(C7) DG(D17):DC(C6) DC(D18):DG(C5) DA(D19):DT(C4) DG(D20):DC(C3) chainB ( 5) SER63 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 9) ALA67 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 12) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 ( 13) ARG71 0 0 0 0 0 0 0 0 0 14 9 2 0 0 0 0 0 0 prot.sequence rkekSrdaArsRRgkenfefyelakllplpaaitsqldkasiirltisylkmrdfanqgdievfeahlgshilqsldgfvfalnqegkflyisetvsiylglsqveltgssvfdyvhpgdhvemaeqlgmlersffirmkstlgykvihitgrlrmglvvvahalphmfvtrvnmdlniiycenrisdymdltpvdivgkrcyhfihaedvegirhshldllnkgqcvtkyyrwmqknggyiwiqssatiakniiwvnyllsnpeykdtpmdiaql >5szt_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH 7-(N-(10- HYDROXYDECANOYL)-AMINOPENTENYL)-7-DEAZA-2'-DATP organism=Thermus aquaticus DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (248) LYS540 0 0 5 4 0 0 0 0 0 0 0 (281) ARG573 4 0 0 0 0 0 0 0 0 0 0 (288) ASN580 0 1 0 0 0 0 0 0 0 0 0 (291) ASN583 1 9 0 0 0 0 0 0 0 0 0 (462) GLN754 1 0 0 0 0 0 0 0 0 0 0 (492) HIS784 2 0 0 0 0 0 0 0 0 0 0 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >5szx_AB:Leucine_zipper_domain; title=EPSTEIN-BARR VIRUS ZTA DNA BINDING DOMAIN HOMODIMER IN COMPLEX WITH METHYLATED DNA organism=Epstein-Barr virus DNA sequence DA(D103):DT(C18) DG(D104):DC(C17) DC(D105):DG(C16) DA(D106):DT(C15) DC(D107):DG(C14) DT(D108):DA(C13) DG(D109):DC(C12) DA(D110):DT(C11) DG(D111):DC(C10) 5CM(D112):DG(C9) DG(D113):5CM(C8) DA(D114):DT(C7) DT(D115):DA(C6) DG(D116):DC(C5) DA(D117):DT(C4) DA(D118):DT(C3) DG(D119):DC(C2) chainA ( 8) ASN182 0 0 0 0 2 8 6 5 0 0 0 0 0 0 0 0 0 ( 11) ALA185 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 ( 12) SER186 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 ( 15) SER189 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG190 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 chainB ( 8) ASN182 0 0 0 0 0 0 0 0 0 3 15 3 0 0 0 0 0 ( 11) ALA185 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 12) SER186 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 ( 15) SER189 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 16) ARG190 0 0 0 0 0 0 0 18 12 6 2 0 0 0 0 0 0 prot.sequence leikrykNrvASrkSRakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtpd/leikrykNrvAsrkSRakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtpd >5szx_B:Leucine_zipper_domain; title=EPSTEIN-BARR VIRUS ZTA DNA BINDING DOMAIN HOMODIMER IN COMPLEX WITH METHYLATED DNA organism=Epstein-Barr virus DNA sequence DA(D103):DT(C18) DG(D104):DC(C17) DC(D105):DG(C16) DA(D106):DT(C15) DC(D107):DG(C14) DT(D108):DA(C13) DG(D109):DC(C12) DA(D110):DT(C11) DG(D111):DC(C10) 5CM(D112):DG(C9) DG(D113):5CM(C8) DA(D114):DT(C7) DT(D115):DA(C6) DG(D116):DC(C5) DA(D117):DT(C4) DA(D118):DT(C3) DG(D119):DC(C2) chainB ( 8) ASN182 0 0 0 0 0 0 0 0 0 3 15 3 0 0 0 0 0 ( 11) ALA185 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 12) SER186 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 ( 15) SER189 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 16) ARG190 0 0 0 0 0 0 0 18 12 6 2 0 0 0 0 0 0 prot.sequence leikrykNrvAsrkSRakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtpd >5t00_D:beta-beta-alpha_zinc_fingers; title=HUMAN CTCF ZNF3-7 AND METHYLATED DNA COMPLEX organism=Homo sapiens DNA sequence DT(E1):DA(F17) DA(E2):DT(F16) DG(E3):DC(F15) 5CM(E4):DG(F14) DG(E5):5CM(F13) DC(E6):DG(F12) DC(E7):DG(F11) DC(E8):DG(F10) DC(E9):DG(F9) DC(E10):DG(F8) DT(E11):DA(F7) DG(E12):DC(F6) DC(E13):DG(F5) DT(E14):DA(F4) DG(E15):DC(F3) DG(E16):DC(F2) DC(E17):DG(F1) chainD ( 12) THR333 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) GLU336 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG339 0 0 7 13 23 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) TYR343 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLU362 0 0 1 1 10 2 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER364 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) LYS365 0 0 0 0 2 10 7 0 0 0 0 0 0 0 0 0 0 ( 47) ARG368 0 0 0 0 0 0 11 18 0 0 0 0 0 0 0 0 0 ( 69) ASP390 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 71) TYR392 0 0 0 0 0 3 19 1 0 0 0 0 0 0 0 0 0 ( 72) LYS393 0 0 0 0 0 0 0 9 10 2 0 0 0 0 0 0 0 ( 75) ARG396 0 0 0 0 0 0 0 0 0 9 15 0 0 0 0 0 0 ( 97) GLN418 0 0 0 0 0 0 0 0 0 0 10 14 0 0 0 0 0 (100) THR421 0 0 0 0 0 0 0 0 0 0 0 5 5 2 0 0 0 (127) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 (129) SER450 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (130) ASP451 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 4 0 (133) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence hkcpdcdmafvTsgElvRhrrYkhthekpfkcsmcdyasvEvsKlkRhirshtgerpfqcslcsyasrDtYKlkRhmrthsgekpyecyicharftQsgTmkmhilqkhtenvakfhcphcdtviaRkSDlgVhlrkqhsyie >5t01_AB:Leucine_zipper_domain;A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=HUMAN C-JUN DNA BINDING DOMAIN HOMODIMER IN COMPLEX WITH METHYLATED DNA organism=Homo sapiens DNA sequence DC(C1):DG(D41) DT(C2):DA(D40) DC(C3):DG(D39) DC(C4):DG(D38) DT(C5):DA(D37) DA(C6):DT(D36) DT(C7):DA(D35) DG(C8):DC(D34) DA(C9):DT(D33) DC(C10):DG(D32) DT(C11):DA(D31) DC(C12):DG(D30) DG(C13):5CM(D29) DT(C14):DA(D28) DC(C15):DG(D27) DC(C16):DG(D26) DA(C17):DT(D25) DT(C18):DA(D24) chainA ( 7) LYS258 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 11) ASN262 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 ( 14) ALA265 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 15) ALA266 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 19) ARG270 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 chainB ( 11) ASN262 0 0 0 0 0 2 9 8 5 0 0 0 0 0 0 0 0 0 ( 14) ALA265 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 15) ALA266 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 ( 19) ARG270 0 0 0 0 0 0 0 0 5 11 12 0 0 0 0 0 0 0 prot.sequence hmkaerKrmrNriaAsksRkrkleriarleekvktlkaqnselastanmlreqvaqlkqkvm/hmkaerkrmrNriAAsksRkrkleriarleekvktlkaqnselastanmlreqvaqlkqkvm >5t01_B:Leucine_zipper_domain;A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=HUMAN C-JUN DNA BINDING DOMAIN HOMODIMER IN COMPLEX WITH METHYLATED DNA organism=Homo sapiens DNA sequence DC(C1):DG(D41) DT(C2):DA(D40) DC(C3):DG(D39) DC(C4):DG(D38) DT(C5):DA(D37) DA(C6):DT(D36) DT(C7):DA(D35) DG(C8):DC(D34) DA(C9):DT(D33) DC(C10):DG(D32) DT(C11):DA(D31) DC(C12):DG(D30) DG(C13):5CM(D29) DT(C14):DA(D28) DC(C15):DG(D27) DC(C16):DG(D26) DA(C17):DT(D25) DT(C18):DA(D24) chainB ( 11) ASN262 0 0 0 0 0 2 9 8 5 0 0 0 0 0 0 0 0 0 ( 14) ALA265 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 15) ALA266 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 ( 19) ARG270 0 0 0 0 0 0 0 0 5 11 12 0 0 0 0 0 0 0 prot.sequence hmkaerkrmrNriAAsksRkrkleriarleekvktlkaqnselastanmlreqvaqlkqkvm >5t0u_D:beta-beta-alpha_zinc_fingers; title=CTCF ZNF2-7 AND DNA COMPLEX STRUCTURE organism=Homo sapiens DNA sequence DC(E1):DG(F23) DC(E2):DG(F22) DT(E3):DA(F21) DC(E4):DG(F20) DA(E5):DT(F19) DC(E6):DG(F18) DT(E7):DA(F17) DA(E8):DT(F16) DG(E9):DC(F15) DC(E10):DG(F14) DG(E11):DC(F13) DC(E12):DG(F12) DC(E13):DG(F11) DC(E14):DG(F10) DC(E15):DG(F9) DC(E16):DG(F8) DT(E17):DA(F7) DG(E18):DC(F6) DC(E19):DG(F5) DT(E20):DA(F4) DG(E21):DC(F3) DG(E22):DC(F2) DC(E23):DG(F1) chainD ( 12) THR305 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) THR307 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LEU308 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR333 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER334 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLU336 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG339 0 0 0 0 0 0 0 0 3 12 21 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) TYR343 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 69) GLU362 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) SER364 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LYS365 0 0 0 0 0 0 0 0 0 0 3 8 6 0 0 0 0 0 0 0 0 0 0 ( 75) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 10 15 0 0 0 0 0 0 0 0 0 ( 97) ASP390 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 99) TYR392 0 0 0 0 0 0 0 0 0 0 0 3 15 2 0 0 0 0 0 0 0 0 0 (100) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 3 0 0 0 0 0 0 0 (103) ARG396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 13 0 0 0 0 0 0 (124) THR417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (125) GLN418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 17 0 0 0 0 0 (128) THR421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 (155) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 (157) SER450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 (158) ASP451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 prot.sequence hkchlcgrafrTvTLlrnhlnthtgtrphkcpdcdmafvTSgElvRhrrYkhthekpfkcsmcdyasvEvSKlkRhirshtgerpfqcslcsyasrDtYKlkRhmrthsgekpyecyicharfTQsgTmkmhilqkhtenvakfhcphcdtviaRkSDlgvhlrkqhsy >5t14_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE KAPPA EXTENDING BEYOND A BULKY MAJOR BENZO[A]PYRENE ADDUCT organism=Homo sapiens DNA sequence DT(T5):DC(P13) DT(T7):DA(P12) DC(T8):DG(P11) DG(T9):DC(P10) DA(T10):DT(P9) DT(T11):DA(P8) DC(T12):DG(P7) DC(T13):DG(P6) DG(T14):DC(P5) chainB (105) MET135 17 0 0 0 0 0 0 0 0 (121) ALA151 3 0 0 0 0 0 0 0 0 (332) GLU419 0 3 0 0 0 0 0 0 0 (372) LYS459 0 1 0 0 0 0 0 0 0 prot.sequence ldkekinkiimeatkgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsMlstsnyharrfgvraAmpgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfiknsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthltrdgerksmsvErtfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiKlknvnfevktrastvssvvstaeeifaiakellkteidadfphplrlrlmgvrissfpn >5t1j_B:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE TBOX DNA BINDING DOMAIN OF THE TRANSCRIPTION FACTOR T-BET organism=MUS MUSCULUS DNA sequence DA(C501):DT(D524) DA(C502):DT(D523) DT(C503):DA(D522) DT(C504):DA(D521) DT(C505):DA(D520) DC(C506):DG(D519) DA(C507):DT(D518) DC(C508):DG(D517) DA(C509):DT(D516) DC(C510):DG(D515) DC(C511):DG(D514) DT(C512):DA(D513) DA(C513):DT(D512) DG(C514):DC(D511) DG(C515):DC(D510) DT(C516):DA(D509) DG(C517):DC(D508) DT(C518):DA(D507) DG(C519):DC(D506) DA(C520):DT(D505) DA(C521):DT(D504) DA(C522):DT(D503) DT(C523):DA(D502) DT(C524):DA(D501) chainB ( 29) ARG164 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) THR303 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) PHE320 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) PHE324 0 0 0 0 0 0 0 2 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klrvalsnhllwskfnqhqtemiitkqgRrmfpflsftvagleptshyrmfvdvvlvdqhhwryqsgkwvqcgkaegsmpgnrlyvhpdspntgahwmrqevsfgklkltnnkgasnnvtqmivlqslhkyqprlhivevndgepeaacsasnthvftfqetqfiavTayqnaeitqlkidnnpFakgFren >5t2h_A:Homing_endonucleases; title=ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE TARGETING THE HUMAN TCRA GENE; HARBORS 43 POINT MUTATIONS RELATIVE TO WILD-TYPE I-ONUI organism=SYNTHETIC CONSTRUCT DNA sequence DC(C2):DG(B24) DA(C3):DT(B23) DA(C4):DT(B22) DA(C5):DT(B21) DA(C6):DT(B20) DT(C7):DA(B19) DC(C8):DG(B18) DG(C9):DC(B17) DG(C10):DC(B16) DT(C11):DA(B15) DG(C12):DC(B14) DA(C13):DT(B13) DA(C14):DT(B12) DT(C15):DA(B11) DA(C16):DT(B10) DG(C17):DC(B9) DG(C18):DC(B8) DC(C19):DG(B7) DA(C20):DT(B6) DG(C21):DC(B5) DA(C22):DT(B4) DC(C23):DG(B3) DA(C24):DT(B2) DC(C25):DG(B1) DC(C26):DG(B0) chainA ( 23) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 ( 25) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 17 0 0 ( 31) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 33) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 ( 35) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 37) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 3 0 0 0 0 0 ( 39) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 ( 41) THR48 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 2 0 0 0 0 0 0 0 0 0 ( 65) SER72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 69) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 71) MET78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 73) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 20 0 0 0 0 0 0 ( 75) THR82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 (173) HIS180 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ASN184 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) LYS186 0 0 0 4 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) TYR195 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) ARG199 0 0 0 0 0 2 11 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) SER203 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) ARG225 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) LYS227 0 0 0 0 0 0 0 6 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) LYS229 0 0 0 0 0 0 0 0 0 9 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) PHE232 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) TRP234 0 0 0 0 0 0 0 0 0 9 20 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) GLU236 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) GLU238 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) THR240 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssinpwiltgfadaegsfildiRnRnnesnRyRtSlRfQiTlhnkdksileniqstwkvgkitnSsdrAvMlRvTrfedlkviidhfekyplitqklgdyklfkqafsvmenkehlkengikelvrikakmnwglndelkkafpeniskerplinknipnfkwlagftagegHfgvNlKkvkgtakvYvglRfaiSqhirdknlmnslitylgcgsiReKnKseFrWlEfEvTkfsdindkiipvfqentligvkledfedwckvaklieekkhltesgldeikkiklnmnkgrvf >5t2n_A:Homing_endonucleases; title=ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE TARGETING THE ANOPHELES AGAP007280 GENE; HARBORS 38 POINT MUTATIONS RELATIVE TO WILD-TYPE I- ONUI organism=SYNTHETIC CONSTRUCT DNA sequence DG(B0):DC(C26) DG(B1):DC(C25) DC(B2):DG(C24) DC(B3):DG(C23) DT(B4):DA(C22) DC(B5):DG(C21) DC(B6):DG(C20) DT(B7):DA(C19) DC(B8):DG(C18) DA(B9):DT(C17) DC(B10):DG(C16) DT(B11):DA(C15) DT(B12):DA(C14) DT(B13):DA(C13) DC(B14):DG(C12) DT(B15):DA(C11) DT(B16):DA(C10) DC(B17):DG(C9) DC(B18):DG(C8) DT(B19):DA(C7) DC(B20):DG(C6) DA(B21):DT(C5) DC(B22):DG(C4) DC(B23):DG(C3) DG(B24):DC(C2) chainA ( 16) SER24 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ILE26 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG28 0 0 0 0 0 0 7 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG30 0 0 0 0 2 12 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET35 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU40 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) GLU42 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER46 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LYS48 0 0 0 0 0 0 0 0 0 8 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR70 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ASN72 0 0 0 0 0 0 0 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) MET78 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG80 0 0 0 0 0 0 5 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) SER82 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) TRP140 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) HIS180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (174) ASN184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 (176) TRP186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 18 3 0 0 0 (178) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 9 0 (187) GLN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 6 0 0 0 (193) SER203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (213) TYR223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (215) LEU225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (217) LYS227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 (219) ARG229 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 (222) LEU232 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (224) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 2 21 4 0 0 0 0 0 0 0 0 0 (228) ARG238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 4 0 0 0 0 0 (230) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 prot.sequence sinpwiltgfadaegSfIlRiRnnngMrvgyLtElifSiKlhnkdksileniqstwkvgkiTnNgdqavMlRvSrfedlkviidhfekyplitqklgdyklfkqaysvmenkehlkengikelvrikakmnWgltdelkkafpeiierplinknipnlkwlagftsgegHfgvNlWkRkggthvgvQlvfgiSqhirdknlmnslitylgcgYiLeKnRseLsWldfRvTkfsdindkiipvfqentligvkledfedwckvaklieekkhltesgldeikkiklnmnkgr >5t2o_A:Homing_endonucleases; title=ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE TARGETING THE ANOPHELES AGAP011377 GENE; HARBORS 53 POINT MUTATIONS RELATIVE TO WILD-TYPE I- ONUI organism=SYNTHETIC CONSTRUCT DNA sequence DC(C2):DG(B24) DG(C3):DC(B23) DC(C4):DG(B22) DA(C5):DT(B21) DG(C6):DC(B20) DA(C7):DT(B19) DC(C8):DG(B18) DG(C9):DC(B17) DT(C10):DA(B16) DA(C11):DT(B15) DG(C12):DC(B14) DA(C13):DT(B13) DA(C14):DT(B12) DA(C15):DT(B11) DT(C16):DA(B10) DT(C17):DA(B9) DT(C18):DA(B8) DT(C19):DA(B7) DC(C20):DG(B6) DC(C21):DG(B5) DG(C22):DC(B4) DG(C23):DC(B3) DC(C24):DG(B2) DC(C25):DG(B1) DC(C26):DG(B0) chainA ( 17) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 19) SER26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 21) TYR28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 0 0 0 0 0 0 ( 33) GLU40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 35) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 19 0 0 0 0 ( 63) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 ( 65) ALA72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 69) VAL76 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 4 0 0 0 0 0 0 0 0 ( 73) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 2 0 0 0 0 0 0 (133) TRP140 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 (173) TYR180 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ALA186 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) GLN195 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG197 0 0 0 23 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) ARG199 0 0 0 0 0 2 19 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) GLU201 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) TYR225 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) LYS227 0 0 0 0 0 0 1 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) LYS229 0 0 0 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG232 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) TRP234 0 0 0 0 0 0 0 0 3 3 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esinpwiltgfadaegSfSlYirntndrpsryEtRlTfaiglhykdksileniqstwkvgiiTnAgnnVvQlRvsrfedlkviidhfekyplitqklgdyklfkqafsvmenkehlkengikelvrikakmnWglndelkkafpeniskerplinknipnlkwlagftsgegYfgvilAkaatvQvRlRfEigqhirdknlmnslitylgcghiYeKnKsgRsWlvytvtkfsdisdkiipvfqkntligvkledfedwckvaklieekkhltesgldeikkiklnmnkgrvf >5t2w_A:Uracil-DNA_glycosylase-like; title=STRUCTURE OF THYMINE DNA GLYCOSYLASE BOUND TO SUBSTRATE ANALOG 2'-F-5- FORMYL-DC organism=Homo sapiens DNA sequence DC(C1):DG(D28) DA(C2):DT(D27) DG(C3):DC(D26) DC(C4):DG(D25) DT(C5):DA(D24) DC(C6):DG(D23) DT(C7):DA(D22) DG(C8):DC(D21) DT(C9):DA(D20) DA(C10):DT(D19) DC(C11):DG(D18) DT(C13):DA(D16) DG(C14):DC(D15) DA(C15):DT(D14) DG(C16):DC(D13) DC(C17):DG(D12) DG(C18):DC(D11) DA(C19):DT(D10) DT(C20):DA(D9) DG(C21):DC(D8) DG(C22):DC(D7) DA(C23):DT(D6) DC(C24):DG(D5) DA(C25):DT(D4) DG(C26):DC(D3) DC(C27):DG(D2) chainA ( 93) SER200 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) LYS201 0 0 0 0 0 0 0 0 4 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) LYS248 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ALA274 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG275 0 0 0 0 0 0 0 0 0 0 5 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) CYS276 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ALA277 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) GLN278 0 0 0 0 0 0 0 0 3 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vdrfngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnHfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvKnlefglqphkipdtetlcyvmpsssARCAQfpraqdkvhyyiklkdlrdqlkgi >5t4i_A:His-Me_finger_endonucleases; title=A NOVEL DOMAIN IN HUMAN EXOG CONVERTS APOPTOTIC ENDONUCLEASE TO DNA- REPAIR ENZYME organism=Homo sapiens DNA sequence DG(F2):DC(E9) DC(F3):DG(E8) DA(F4):DT(E7) DC(F5):DG(E6) DG(F6):DC(E5) DT(F7):DA(E4) DC(F8):DG(E3) DA(F9):DT(E2) DG(F10):DC(E1) chainA ( 50) ARG109 0 0 0 0 0 0 2 4 0 ( 51) LYS110 0 0 0 0 3 0 0 0 0 (109) PHE168 0 0 0 0 0 0 2 2 0 (113) SER172 0 0 0 0 0 0 0 5 6 (117) ASN176 0 0 0 0 0 0 0 0 4 (248) PHE307 0 0 0 0 0 0 0 0 1 (252) LEU311 0 0 0 0 0 0 0 0 17 (255) ARG314 0 0 0 0 0 0 0 0 3 (256) LYS315 0 0 0 0 0 0 0 2 9 (265) ARG324 0 0 0 0 0 0 2 0 0 prot.sequence avleqfgfpltgtearcytnhalsydqakrvprwvlehiskskimgdadRKhckfkpdpnipptfsafnedyvgsgwsrgamapagnnkfsskamaetfylsnivpqdFdnnSgywNriemycrelterfedvwvvsgpltlpqtrgdgkkivsyqvigednvavpshlykvilarrssvsteplalgafvvpneaigfqpqltefqvslqdleklsglvffphldrtsdirnicsvdtcklldfqeFtlyLstRKiegarsvlRlekimenlknaeiepddyfmsryekkleelka >5t5c_B:His-Me_finger_endonucleases; title=A NOVEL DOMAIN IN HUMAN EXOG CONVERTS APOPTOTIC ENDONUCLEASE TO DNA- REPAIR ENZYME organism=Homo sapiens DNA sequence DC(E1):DG(F10) DT(E2):DA(F9) DG(E3):DC(F8) DA(E4):DT(F7) DC(E5):DG(F6) DG(E6):DC(F5) DT(E7):DA(F4) DG(E8):DC(F3) chainB ( 49) ARG109 0 5 2 0 0 0 0 0 ( 50) LYS110 0 0 4 4 0 0 0 0 (108) PHE168 0 2 2 0 0 0 0 0 (112) SER172 6 3 0 0 0 0 0 0 (116) ASN176 5 0 0 0 0 0 0 0 (247) PHE307 1 0 0 0 0 0 0 0 (251) LEU311 16 0 0 0 0 0 0 0 (254) ARG314 4 0 0 0 0 0 0 0 (255) LYS315 11 4 0 0 0 0 0 0 (260) ARG320 0 0 1 5 0 0 0 0 prot.sequence vleqfgfpltgtearcytnhalsydqakrvprwvlehiskskimgdadRKhckfkpdpnipptfsafnedyvgsgwsrgamapagnnkfsskamaetfylsnivpqdFdnnSgywNriemycrelterfedvwvvsgpltlpqtrgdgkkivsyqvigednvavpshlykvilarrssvsteplalgafvvpneaigfqpqltefqvslqdleklsglvffphldrtsdirnicsvdtcklldfqeFtlyLstRKiegaRsvlrlekimenlknaeiepddyfmsryekkleelka >5t5k_ABCDEF:Histone-fold; title=STRUCTURE OF HISTONE-BASED CHROMATIN IN ARCHAEA organism=Methanothermus fervidus DNA sequence DA(I2):DA(J90) DG(I4):DC(J89) DA(I5):DT(J88) DA(I6):DT(J87) DC(I7):DG(J86) DC(I8):DG(J85) DG(I9):DC(J84) DT(I10):DA(J83) DA(I11):DT(J82) DC(I12):DG(J81) DT(I13):DA(J80) DG(I14):DC(J79) DT(I15):DA(J78) DC(I16):DG(J77) DG(I17):DC(J76) DT(I18):DA(J75) DC(I19):DG(J74) DT(I20):DA(J73) DG(I21):DC(J72) DC(I22):DG(J71) DG(I23):DC(J70) DG(I24):DC(J69) DC(I25):DG(J68) DC(I26):DG(J67) DT(I27):DA(J66) DT(I28):DA(J65) DT(I29):DA(J64) DG(I30):DC(J63) DA(I31):DT(J62) DT(I32):DA(J61) DT(I33):DA(J60) DA(I34):DT(J59) DT(I35):DA(J58) DC(I36):DG(J57) DA(I37):DT(J56) DA(I38):DT(J55) DT(I39):DA(J54) DT(I40):DA(J53) DA(I41):DT(J52) DA(I42):DT(J51) DA(I43):DT(J50) DG(I44):DC(J49) DC(I45):DG(J48) DG(I46):DC(J47) DT(I47):DA(J46) DT(I48):DA(J45) DC(I49):DG(J44) DT(I50):DA(J43) DA(I51):DT(J42) DC(I52):DG(J41) DG(I53):DC(J40) DG(I54):DC(J39) DC(I55):DG(J38) DG(I56):DC(J37) DT(I57):DA(J36) DT(I58):DA(J35) DT(I59):DA(J34) DT(I60):DA(J33) DT(I61):DA(J32) DG(I62):DC(J31) DA(I63):DT(J30) DT(I64):DA(J29) DC(I65):DG(J28) DG(I66):DC(J27) DC(I67):DG(J26) DT(I68):DA(J25) DC(I69):DG(J24) DA(I70):DT(J23) DA(I71):DT(J22) DC(I72):DG(J21) DT(I73):DA(J20) DG(I74):DC(J19) DT(I75):DA(J18) DG(I76):DC(J17) DC(I77):DG(J16) DG(I78):DC(J15) DA(I79):DT(J14) DG(I80):DC(J13) DC(I81):DG(J12) DT(I82):DA(J11) DA(I83):DT(J10) DG(I84):DC(J9) DA(I85):DT(J8) DT(I86):DA(J7) DC(I87):DG(J6) DT(I88):DA(J5) DC(I89):DG(J4) DA(I90):DT(J3) chainA ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 chainC ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 19) ARG19 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence melpiapigriikdagaeRvsddaritlakileemgrdiaseaiklarhagrktikaedielavrrf/melpiapigriikdagaeRvsddaritlakileemgrdiaseaiklarhagrktikaedielavrrfk/melpiapigriikdagaeRvsddaritlakileemgrdiaseaiklarhagrktikaedielavrrfk/melpiapigriikdagaeRvsddaritlakileemgrdiaseaiklarhagrktikaedielavrrf/melpiapigriikdagaeRvsddaritlakileemgrdiaseaiklarhagrktikaedielavrrf/melpiapigriikdagaeRvsddaritlakileemgrdiaseaiklarhagrktikaedielavrrf >5t5k_E:Histone-fold; title=STRUCTURE OF HISTONE-BASED CHROMATIN IN ARCHAEA organism=Methanothermus fervidus DNA sequence DT(J3):DA(I90) DG(J4):DC(I89) DA(J5):DT(I88) DG(J6):DC(I87) DA(J7):DT(I86) DT(J8):DA(I85) DC(J9):DG(I84) DT(J10):DA(I83) DA(J11):DT(I82) DG(J12):DC(I81) DC(J13):DG(I80) DT(J14):DA(I79) DC(J15):DG(I78) DG(J16):DC(I77) DC(J17):DG(I76) DA(J18):DT(I75) DC(J19):DG(I74) DA(J20):DT(I73) DG(J21):DC(I72) DT(J22):DA(I71) DT(J23):DA(I70) DG(J24):DC(I69) DA(J25):DT(I68) DG(J26):DC(I67) DC(J27):DG(I66) DG(J28):DC(I65) DA(J29):DT(I64) DT(J30):DA(I63) DC(J31):DG(I62) DA(J32):DT(I61) DA(J33):DT(I60) DA(J34):DT(I59) DA(J35):DT(I58) DA(J36):DT(I57) DC(J37):DG(I56) DG(J38):DC(I55) DC(J39):DG(I54) DC(J40):DG(I53) DG(J41):DC(I52) DT(J42):DA(I51) DA(J43):DT(I50) DG(J44):DC(I49) DA(J45):DT(I48) DA(J46):DT(I47) DC(J47):DG(I46) DG(J48):DC(I45) DC(J49):DG(I44) DT(J50):DA(I43) DT(J51):DA(I42) DT(J52):DA(I41) DA(J53):DT(I40) DA(J54):DT(I39) DT(J55):DA(I38) DT(J56):DA(I37) DG(J57):DC(I36) DA(J58):DT(I35) DT(J59):DA(I34) DA(J60):DT(I33) DA(J61):DT(I32) DT(J62):DA(I31) DC(J63):DG(I30) DA(J64):DT(I29) DA(J65):DT(I28) DA(J66):DT(I27) DG(J67):DC(I26) DG(J68):DC(I25) DC(J69):DG(I24) DC(J70):DG(I23) DG(J71):DC(I22) DC(J72):DG(I21) DA(J73):DT(I20) DG(J74):DC(I19) DA(J75):DT(I18) DC(J76):DG(I17) DG(J77):DC(I16) DA(J78):DT(I15) DC(J79):DG(I14) DA(J80):DT(I13) DG(J81):DC(I12) DT(J82):DA(I11) DA(J83):DT(I10) DC(J84):DG(I9) DG(J85):DC(I8) DG(J86):DC(I7) DT(J87):DA(I6) DT(J88):DA(I5) DC(J89):DG(I4) DA(J90):DA(I2) chainE ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence melpiapigriikdagaeRvsddaritlakileemgrdiaseaiklarhagrktikaedielavrrf >5t7x_AB:Viral_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HHV-4 EBNA1 DNA BINDING DOMAIN (PATIENT-DERIVED, NASOPHARYNGEAL CARCINOMA) BOUND TO DNA organism=Human herpesvirus 4 (strain B95-8) / Human herpesvirus 4 (strain B95-8) / Human herpesvirus 4 (strain B95-8) / Human herpesvirus 4 (strain B95-8) DNA sequence DG(D201):DC(C118) DG(D202):DC(C117) DG(D203):DC(C116) DT(D204):DA(C115) DA(D205):DT(C114) DG(D206):DC(C113) DC(D207):DG(C112) DA(D208):DT(C111) DT(D209):DA(C110) DA(D210):DT(C109) DG(D211):DC(C108) DG(D212):DC(C107) DC(D213):DG(C106) DT(D214):DA(C105) DA(D215):DT(C104) DT(D216):DA(C103) DC(D217):DG(C102) DC(D218):DG(C101) chainA ( 4) TRP464 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 5) PHE465 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG469 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 17) LYS477 11 9 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) PHE478 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 55) THR515 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) TYR518 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN519 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG522 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 3) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 5 0 0 ( 6) TRP464 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 7) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 19) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 11 ( 56) LYS514 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 57) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 ( 60) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 ( 61) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 64) ARG522 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence kggWFgkhRgqggsnpKFeniaeglrvllarshvertteegnwvagvfvyggsKTslYNlrRgialavpqcritplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmikpaptcnikvtvcsfddgvdlp/rkKggWFgkhrgqggsnpKfeniaeglrvllarshvertteegnwvagvfvyggsKTslYNlrRgialavpqcritplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmikpaptcnikvtvcsfddgvdlp >5t7x_B:Viral_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HHV-4 EBNA1 DNA BINDING DOMAIN (PATIENT-DERIVED, NASOPHARYNGEAL CARCINOMA) BOUND TO DNA organism=Human herpesvirus 4 (strain B95-8) / Human herpesvirus 4 (strain B95-8) DNA sequence DG(D201):DC(C118) DG(D202):DC(C117) DG(D203):DC(C116) DT(D204):DA(C115) DA(D205):DT(C114) DG(D206):DC(C113) DC(D207):DG(C112) DA(D208):DT(C111) DT(D209):DA(C110) DA(D210):DT(C109) DG(D211):DC(C108) DG(D212):DC(C107) DC(D213):DG(C106) DT(D214):DA(C105) DA(D215):DT(C104) DT(D216):DA(C103) DC(D217):DG(C102) DC(D218):DG(C101) chainB ( 3) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 5 0 0 ( 6) TRP464 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 7) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 19) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 11 ( 56) LYS514 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 57) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 ( 60) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 ( 61) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 64) ARG522 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence rkKggWFgkhrgqggsnpKfeniaeglrvllarshvertteegnwvagvfvyggsKTslYNlrRgialavpqcritplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmikpaptcnikvtvcsfddgvdlp >5t8d_A:Homing_endonucleases; title=ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE TARGETING THE HIV INTEGRASE GENE; HARBORS 47 POINT MUTATIONS RELATIVE TO WILD-TYPE I-ONUI organism=SYNTHETIC CONSTRUCT DNA sequence DG(B2):DC(C26) DG(B3):DC(C25) DA(B4):DT(C24) DA(B5):DT(C23) DT(B6):DA(C22) DG(B7):DC(C21) DG(B8):DC(C20) DC(B9):DG(C19) DA(B10):DT(C18) DG(B11):DC(C17) DT(B12):DA(C16) DA(B13):DT(C15) DT(B14):DA(C14) DT(B15):DA(C13) DC(B16):DG(C12) DA(B17):DT(C11) DT(B18):DA(C10) DC(B19):DG(C9) DC(B20):DG(C8) DA(B21):DT(C7) DC(B22):DG(C6) DA(B23):DT(C5) DA(B24):DT(C4) DT(B25):DA(C3) DG(B26):DC(C2) chainA ( 18) SER24 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) TYR28 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 22 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS44 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR46 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR48 0 0 0 0 0 0 0 0 0 5 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ILE68 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ALA70 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN72 0 0 0 0 0 0 0 0 15 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ALA76 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ILE80 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) TRP140 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) HIS180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 (175) GLU184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 (177) ILE186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 3 0 0 (181) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (186) HIS195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 (188) ARG197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 9 0 0 0 (190) ARG199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 (192) GLU201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 1 0 0 0 0 0 0 (194) ALA203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (216) TYR225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 (218) GLN227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 8 0 0 0 0 0 0 0 (220) TYR229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 (223) ARG232 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (225) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 7 1 0 0 0 0 0 0 0 0 (227) ARG236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 13 17 0 0 0 0 0 0 (229) SER238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (231) SER240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence assinpwiltgfadaegSfglYiinrniryttRlKfTiTlhnkdksileniqstwkvgIiAnNgdnAvslIvtrfedlkviidhfekyplitqklgdyklfkqafsvmenkehlkengikelvrikakmnWgltdelkkafpgnisrerplinknipnfkwlagftsgegHfgvElIknsRnsrvHvRlRfEiAqhvrdknlmnslitylgcgyiYeQnYseRsWlRfSvSkfsdindkiipvfqentligvkledfedwckvaklieekkhltesgldeikkiklnmnKgr >5t9j_B:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN GEN1 IN COMPLEX WITH HOLLIDAY JUNCTION DNA IN THE UPPER INTERFACE organism=Homo sapiens DNA sequence DG(E1):DC(F20) DC(E2):DG(F19) DA(E3):DT(F18) DT(E4):DA(F17) DC(E5):DG(F16) DC(E6):DG(F15) DC(E7):DG(F14) DT(E8):DA(F13) DA(E9):DT(F12) DA(E10):DT(F11) chainB ( 40) VAL41 6 0 0 0 0 0 0 0 0 0 ( 42) LYS43 14 2 0 0 0 0 0 0 0 0 ( 43) MET44 8 0 0 0 0 0 0 0 0 0 ( 46) SER47 1 0 0 0 0 0 0 0 0 0 ( 50) PRO51 3 0 0 0 0 0 0 0 0 0 ( 53) ARG54 10 5 0 0 0 0 0 0 0 0 ( 54) ASN55 8 0 0 0 0 0 0 0 0 0 prot.sequence gvndlwqilepvkqhiplrnlggktiavnlslwvceaqtVkKMmgSvmkPhlRNlffrisyltqmdvklvfvmegeppklrygssgkswsqktgrshfksvlreclhmleclgipwvqaageaeamcaylnagghvdgcltndgdtflygaqtvyrnftmntkdphvdcytmssiksklgldrdalvglaillgcdylpkgvpgvgkeqalkliqilkgqsllqrfnrwnqlnevennikkkacccegfpfheviqefllnkdklvkviryqrpdlllfqrftlekmewpnhyacekllvllthydmierklgsrnsnqlqpirivktrirngvhcfeiewekpehyamedkqhgefalltieeeslfeaaypeivavyqkqkleikgkkq >5tb8_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=PRECATALYTIC TERNARY COMPLEX OF HUMAN DNA POLYMERASE BETA IN CLOSED CONFORMATION WITH GAPPED DNA SUBSTRATE INCOMING (-)3TC-TP AND MN2+. organism=HOMO SAPIENS DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) chainA (223) LYS234 0 0 0 0 0 0 0 0 0 1 (258) TYR271 0 0 0 0 0 0 0 0 1 8 (270) ARG283 0 0 0 0 0 0 0 0 0 3 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndeyphrridiRlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrsehhhhhh >5tba_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=POSTCATALYTIC TERNARY COMPLEX OF HUMAN DNA POLYMERASE BETA WITH GAPPED DNA SUBSTRATE, INCORPORATED (-)3TC AND PPI. organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 26) HIS34 39 0 0 0 0 ( 27) LYS35 10 0 0 0 0 ( 30) ALA38 4 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahkgftineytirplgvtgvageplpvdsekdifdyiqwepkdr >5tbb_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=POSTCATALYTIC TERNARY COMPLEX OF HUMAN DNA POLYMERASE BETA WITH GAPPED DNA SUBSTRATE, INCORPORATED (-)FTC AND PPI. organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 39 0 0 0 0 ( 26) LYS35 10 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknneytvageplpvdsekdifdyepkdr >5tbc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=PRECATALYTIC TERNARY COMPLEX OF HUMAN DNA POLYMERASE BETA WITH GAPPED DNA SUBSTRATE, INCORPORATED (-)3TC-MP AND AN ANOTHER INCOMING (-)3TC- TP NUCLEOTIDE. organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 37 0 0 0 0 ( 26) LYS35 9 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrKaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrneytvdsekdifdyyrepkdr >5tgx_A: title=RESTRICTION/MODIFICATION SYSTEM-TYPE II R-SWAI COMPLEXED WITH PARTIALLY CLEAVED DNA organism=Staphylococcus warneri DNA sequence DC(I2):DG(H37) DC(I3):DG(H36) DG(I4):DC(H35) DC(I5):DG(H34) DG(I6):DC(H33) DC(I7):DG(H32) DG(I8):DC(H31) DG(I9):DC(H30) DC(I10):DG(H29) DA(I11):DT(H28) DT(I12):DA(H27) DT(I13):DA(H26) DT(I14):DA(H25) DA(I25):DT(H14) DA(I26):DT(H13) DA(I27):DT(H12) DT(I28):DA(H11) DG(I29):DC(H10) DC(I30):DG(H9) DC(I31):DG(H8) DT(I32):DA(H7) DC(I33):DG(H6) DC(I34):DG(H5) DG(I35):DC(H4) DC(I36):DG(H3) DC(I37):DG(H2) chainA ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 1 12 4 17 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LYS72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 7 0 0 0 0 0 0 0 0 0 (102) ASP103 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) SER104 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASN105 0 0 0 0 0 0 0 0 4 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) PRO106 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ASP107 0 0 0 0 0 0 0 0 0 0 0 26 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (161) ARG162 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ASN164 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) LYS166 0 0 0 0 0 0 0 0 0 0 2 20 3 2 1 0 0 0 0 0 0 0 0 0 0 0 (167) GLN168 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (169) GLN170 0 0 0 0 0 0 0 0 0 8 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nfkkyeenlvasieeviqriiddkhrpniigktRvgaevsdyledefvkyissgkssslydaqgapkektKnpwdarckfkfmdreeeiwidfkafkitnmDSNPDigtpnkivkfihegnfylvfvlvyyeskqdgvefvkynndykkvyllkdvnesfRiNpKpQmQvniaaeptyrtreefihffvkkwkesferqikslekkeimlkdledklknsndnsi >5tgx_AB: title=RESTRICTION/MODIFICATION SYSTEM-TYPE II R-SWAI COMPLEXED WITH PARTIALLY CLEAVED DNA organism=Staphylococcus warneri DNA sequence DC(I2):DG(H37) DC(I3):DG(H36) DG(I4):DC(H35) DC(I5):DG(H34) DG(I6):DC(H33) DC(I7):DG(H32) DG(I8):DC(H31) DG(I9):DC(H30) DC(I10):DG(H29) DA(I11):DT(H28) DT(I12):DA(H27) DT(I13):DA(H26) DT(I14):DA(H25) DA(I25):DT(H14) DA(I26):DT(H13) DA(I27):DT(H12) DT(I28):DA(H11) DG(I29):DC(H10) DC(I30):DG(H9) DC(I31):DG(H8) DT(I32):DA(H7) DC(I33):DG(H6) DC(I34):DG(H5) DG(I35):DC(H4) DC(I36):DG(H3) DC(I37):DG(H2) chainA ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 1 12 4 17 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LYS72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 7 0 0 0 0 0 0 0 0 0 (102) ASP103 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) SER104 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASN105 0 0 0 0 0 0 0 0 4 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) PRO106 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ASP107 0 0 0 0 0 0 0 0 0 0 0 26 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (161) ARG162 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ASN164 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) LYS166 0 0 0 0 0 0 0 0 0 0 2 20 3 2 1 0 0 0 0 0 0 0 0 0 0 0 (167) GLN168 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (169) GLN170 0 0 0 0 0 0 0 0 0 8 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 17 4 6 1 0 0 0 0 0 0 0 0 0 0 ( 37) ALA38 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LYS72 0 0 0 0 0 0 0 0 0 7 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ASP103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (103) SER104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (104) ASN105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 4 0 0 0 0 0 0 0 0 (105) PRO106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (106) ASP107 0 0 0 0 0 0 0 0 0 0 0 0 1 0 12 0 0 0 0 0 0 0 0 0 0 0 (161) ARG162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 (163) ASN164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (165) LYS166 0 0 0 0 0 0 0 0 0 0 0 2 1 3 10 2 0 0 0 0 0 0 0 0 0 0 (167) GLN168 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) GLN170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 8 0 0 0 0 0 0 0 0 0 prot.sequence nfkkyeenlvasieeviqriiddkhrpniigktRvgaevsdyledefvkyissgkssslydaqgapkektKnpwdarckfkfmdreeeiwidfkafkitnmDSNPDigtpnkivkfihegnfylvfvlvyyeskqdgvefvkynndykkvyllkdvnesfRiNpKpQmQvniaaeptyrtreefihffvkkwkesferqikslekkeimlkdledklknsndnsi/nfkkyeenlvasieeviqriiddkhrpniigktRvgAevsdyledefvkyissgkssslydaqgapkektKnpwdarckfkfmdreeeiwidfkafkitnmDSNPDigtpnkivkfihegnfylvfvlvyyeskqdgvefvkynndykkvyllkdvnesfRiNpKpQmQvniaaeptyrtreefihffvkkwkesferqikslekkeimlkdledklknsndnsi >5tgx_CD: title=RESTRICTION/MODIFICATION SYSTEM-TYPE II R-SWAI COMPLEXED WITH PARTIALLY CLEAVED DNA organism=Staphylococcus warneri DNA sequence DG(J2):DC(K37) DG(J3):DC(K36) DC(J4):DG(K35) DG(J5):DC(K34) DG(J6):DC(K33) DA(J7):DT(K32) DG(J8):DC(K31) DG(J9):DC(K30) DC(J10):DG(K29) DA(J11):DT(K28) DT(J12):DA(K27) DT(J13):DA(K26) DT(J14):DA(K25) DA(J25):DT(K14) DA(J26):DT(K13) DA(J27):DT(K12) DT(J28):DA(K11) DG(J29):DC(K10) DC(J30):DG(K9) DC(J31):DG(K8) DG(J32):DC(K7) DC(J33):DG(K6) DG(J34):DC(K5) DC(J35):DG(K4) DG(J36):DC(K3) chainC ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 13 4 5 1 0 0 0 0 0 0 0 0 0 ( 71) LYS72 0 0 0 0 0 0 0 0 0 7 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ASP103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (103) SER104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (104) ASN105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 4 0 0 0 0 0 0 0 (105) PRO106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (106) ASP107 0 0 0 0 0 0 0 0 0 0 0 0 1 0 12 0 0 0 0 0 0 0 0 0 0 (161) ARG162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 (163) ASN164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (165) LYS166 0 0 0 0 0 0 0 0 0 0 0 2 2 3 9 2 0 0 0 0 0 0 0 0 0 (167) GLN168 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (169) GLN170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 8 0 0 0 0 0 0 0 0 chainD ( 34) ARG35 0 0 0 0 0 0 0 0 0 0 1 12 4 19 0 0 0 0 0 0 0 0 0 0 0 ( 71) LYS72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 7 0 0 0 0 0 0 0 0 (102) ASP103 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) SER104 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASN105 0 0 0 0 0 0 0 0 4 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) PRO106 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ASP107 0 0 0 0 0 0 0 0 0 0 0 24 0 1 0 0 0 0 0 0 0 0 0 0 0 (161) ARG162 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ASN164 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) LYS166 0 0 0 0 0 0 0 0 0 0 2 20 3 1 1 0 0 0 0 0 0 0 0 0 0 (167) GLN168 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (169) GLN170 0 0 0 0 0 0 0 0 0 8 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nfkkyeenlvasieeviqriiddkhrpniigktRvgaevsdyledefvkyissgkssslydaqgapkektKnpwdarckfkfmdreeeiwidfkafkitnmDSNPDigtpnkivkfihegnfylvfvlvyyeskqdgvefvkynndykkvyllkdvnesfRiNpKpQmQvniaaeptyrtreefihffvkkwkesferqikslekkeimlkdledklknsndnsi/nfkkyeenlvasieeviqriiddkhrpniigktRvgaevsdyledefvkyissgkssslydaqgapkektKnpwdarckfkfmdreeeiwidfkafkitnmDSNPDigtpnkivkfihegnfylvfvlvyyeskqdgvefvkynndykkvyllkdvnesfRiNpKpQmQvniaaeptyrtreefihffvkkwkesferqikslekkeimlkdledklknsndnsi >5thg_A:Homing_endonucleases; title=ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE TARGETING THE HIV CCR5 GENE; HARBORS 43 POINT MUTATIONS RELATIVE TO WILD-TYPE I-ONUI organism=SYNTHETIC CONSTRUCT DNA sequence DA(B3):DT(C28) DC(B4):DG(C27) DC(B5):DG(C26) DT(B6):DA(C25) DT(B7):DA(C24) DC(B8):DG(C23) DC(B9):DG(C22) DA(B10):DT(C21) DG(B11):DC(C20) DG(B12):DC(C19) DA(B13):DT(C18) DA(B14):DT(C17) DT(B15):DA(C16) DT(B16):DA(C15) DC(B17):DG(C14) DT(B18):DA(C13) DT(B19):DA(C12) DT(B20):DA(C11) DG(B21):DC(C10) DG(B22):DC(C9) DC(B23):DG(C8) DC(B24):DG(C7) DT(B25):DA(C6) DG(B26):DC(C5) DC(B27):DG(C4) DA(B28):DT(C3) DC(B29):DG(C2) chainA ( 18) SER24 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) MET26 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG28 0 0 0 0 0 0 10 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG30 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) TYR40 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER42 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLU46 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR48 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG72 0 0 0 0 0 0 0 1 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR76 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG78 0 0 0 0 0 0 0 5 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) TRP140 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) THR180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (174) TYR182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 (176) HIS184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 1 0 0 0 0 0 0 (186) TYR195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (188) ARG197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 19 7 0 0 0 0 (190) ARG199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 6 0 0 0 0 0 0 (192) ILE201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (216) GLN225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 (218) LYS227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 0 0 0 0 0 0 0 0 0 (225) MET234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (227) HIS236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 (231) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (290) LYS299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence resinpwiltgftdaegSfMlRiRntnnrsvgyYtSlvfEiTlhnkdksileniqstwkvgtinnRgdgTaRlsvtrfedlkviidhfekyplitqklgdyklfkqafsvmenkehlkengikelvrikakmnWglndelkkafpenierplinknipnlkwlagftsgegTfYvHlakeasgkvYvRlRfIigqhirdknlmnslitylgcgtiQeKnrskgsMlHfivTkfsdindkiipvfqentligvkledfedwckvaklieekkhltesgldeikkiklnmnKgrvf >5tkz_AB:RNA-binding_domain,_RBD; title=MEC-8 N-TERMINAL RRM BOUND TO TANDEM GCAC LIGAND organism=Caenorhabditis elegans DNA sequence DC(C39) DA(C38) DA(C15) DG(C16) DC(C17) DA(C18) DC(C19) DA(C20) DA(C35) DG(C36) DC(C37):DA(C38) chainA ( 4) THR32 0 1 0 0 0 0 0 0 0 0 1 ( 6) PHE34 0 0 0 0 0 0 0 0 0 5 30 ( 8) SER36 0 0 0 0 0 0 0 0 0 7 0 ( 33) LEU61 0 2 0 0 0 0 0 0 0 0 2 ( 37) THR65 0 0 0 0 0 0 0 0 0 4 0 ( 44) THR72 0 0 0 0 0 0 0 0 0 1 0 ( 45) SER73 0 0 0 0 0 0 0 0 2 4 0 ( 47) VAL75 0 0 0 0 0 0 0 0 0 8 0 ( 49) PHE77 0 46 0 0 0 0 0 0 0 0 51 ( 79) ARG107 0 0 0 0 0 0 0 0 7 6 0 ( 81) GLU109 0 0 0 0 0 0 0 0 0 0 9 ( 83) ALA111 0 0 0 0 0 0 0 0 0 0 3 ( 84) LYS112 0 0 0 0 0 0 0 0 0 0 11 ( 85) SER113 3 1 0 0 0 0 0 0 0 0 1 ( 87) THR115 3 10 0 0 0 0 0 0 0 0 10 ( 88) LYS116 21 0 0 0 0 0 0 0 0 0 0 ( 89) VAL117 3 0 0 0 0 0 0 0 0 0 0 chainB ( 4) THR32 0 0 0 0 0 1 0 0 0 0 0 ( 6) PHE34 0 0 0 7 33 0 0 0 0 0 0 ( 8) SER36 0 0 0 9 0 0 0 0 0 0 0 ( 33) LEU61 0 0 0 0 0 2 0 0 0 0 0 ( 35) LYS63 0 0 0 0 0 9 1 0 0 0 0 ( 37) THR65 0 0 0 4 0 0 0 0 0 0 0 ( 44) THR72 0 0 0 2 0 0 0 0 0 0 0 ( 45) SER73 0 0 4 6 0 0 0 0 0 0 0 ( 47) VAL75 0 0 0 8 0 0 0 0 0 0 0 ( 49) PHE77 0 0 0 0 4 46 0 0 0 0 0 ( 79) ARG107 0 0 7 5 0 0 0 0 0 0 0 ( 81) GLU109 0 0 0 0 6 0 0 0 0 0 0 ( 83) ALA111 0 0 0 0 3 0 0 0 0 0 0 ( 84) LYS112 0 0 0 0 17 0 0 0 0 0 0 ( 85) SER113 0 0 0 0 0 2 3 0 0 0 0 ( 87) THR115 0 0 0 0 0 10 3 0 0 0 0 ( 88) LYS116 0 0 0 0 0 0 9 0 0 0 0 prot.sequence qvrTlFvSglpmdakprelyllfrgargyegaLlkmTskngkpTSpVgFvtflsqqdaqdarkmlqgvrfdpeaaqvlRlElAKSnTKV/qvrTlFvSglpmdakprelyllfrgargyegaLlKmTskngkpTSpVgFvtflsqqdaqdarkmlqgvrfdpeaaqvlRlElAKSnTKv >5tkz_B:RNA-binding_domain,_RBD; title=MEC-8 N-TERMINAL RRM BOUND TO TANDEM GCAC LIGAND organism=Caenorhabditis elegans DNA sequence DC(C39) DA(C38) DA(C15) DG(C16) DC(C17) DA(C18) DC(C19) DA(C20) DA(C35) DG(C36) DC(C37):DA(C38) chainB ( 4) THR32 0 0 0 0 0 1 0 0 0 0 0 ( 6) PHE34 0 0 0 7 33 0 0 0 0 0 0 ( 8) SER36 0 0 0 9 0 0 0 0 0 0 0 ( 33) LEU61 0 0 0 0 0 2 0 0 0 0 0 ( 35) LYS63 0 0 0 0 0 9 1 0 0 0 0 ( 37) THR65 0 0 0 4 0 0 0 0 0 0 0 ( 44) THR72 0 0 0 2 0 0 0 0 0 0 0 ( 45) SER73 0 0 4 6 0 0 0 0 0 0 0 ( 47) VAL75 0 0 0 8 0 0 0 0 0 0 0 ( 49) PHE77 0 0 0 0 4 46 0 0 0 0 0 ( 79) ARG107 0 0 7 5 0 0 0 0 0 0 0 ( 81) GLU109 0 0 0 0 6 0 0 0 0 0 0 ( 83) ALA111 0 0 0 0 3 0 0 0 0 0 0 ( 84) LYS112 0 0 0 0 17 0 0 0 0 0 0 ( 85) SER113 0 0 0 0 0 2 3 0 0 0 0 ( 87) THR115 0 0 0 0 0 10 3 0 0 0 0 ( 88) LYS116 0 0 0 0 0 0 9 0 0 0 0 prot.sequence qvrTlFvSglpmdakprelyllfrgargyegaLlKmTskngkpTSpVgFvtflsqqdaqdarkmlqgvrfdpeaaqvlRlElAKSnTKv >5trd_AB:Riboflavin_kinase-like;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF RBKR (RIBOFLAVIN KINASE) FROM THERMOPLASMA ACIDOPHILUM DETERMINED IN COMPLEX WITH CTP AND ITS COGNATE DNA OPERATOR organism=Thermoplasma acidophilum DNA sequence DT(H2):DA(G19) DT(H3):DA(G18) DA(H4):DT(G17) DC(H5):DG(G16) DT(H6):DA(G15) DC(H7):DG(G14) DG(H8):DC(G13) DT(H9):DA(G12) DG(H10):DC(G11) DA(H11):DT(G10) DA(H12):DT(G9) DT(H13):DA(G8) DT(H14):DA(G7) DA(H15):DT(G6) DG(H16):DC(G5) DT(H17):DA(G4) DA(H18):DT(G3) DA(H19):DT(G2) chainA ( 34) SER38 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN39 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN40 0 0 4 9 14 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) SER41 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER43 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG44 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) SER28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 32) SER38 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 33) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 ( 34) GLN40 0 0 0 0 0 0 0 0 0 0 0 0 2 14 9 4 0 0 ( 35) SER41 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 37) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 38) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 55) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence dqyyraikkikeaaeasnrayltsskladmlgiSQQSaSRiiidlekngyitrtvtkrgqilnitekgldvlytefadlsrilaiknnvvitgtvtsgmgegryyvarkqyiiqfqeklgiipylgtlnikvdqaslpelrkirgfrgihiegfktedrtfgsvkafpakiqnipcfvimpertvytdvieiisdkylreeinlhdgdrvsvevytegh/yyraikkikeaaeasnrayltSskladmlgiSQQSaSRiiidlekngyitrtvtKrgqilnitekgldvlytefadlsrilaiknnvvitgtvtsgmgegryyvarkqyiiqfqeklgiipylgtlnikvdqaslpelrkirgfrgihiegfktedrtfgsvkafpakiqnipcfvimpertvytdvieiisdkylreeinlhdgdrvsvevyte >5trd_B:Riboflavin_kinase-like;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF RBKR (RIBOFLAVIN KINASE) FROM THERMOPLASMA ACIDOPHILUM DETERMINED IN COMPLEX WITH CTP AND ITS COGNATE DNA OPERATOR organism=Thermoplasma acidophilum DNA sequence DT(G2):DA(H19) DT(G3):DA(H18) DA(G4):DT(H17) DC(G5):DG(H16) DT(G6):DA(H15) DA(G7):DT(H14) DA(G8):DT(H13) DT(G9):DA(H12) DT(G10):DA(H11) DC(G11):DG(H10) DA(G12):DT(H9) DC(G13):DG(H8) DG(G14):DC(H7) DA(G15):DT(H6) DG(G16):DC(H5) DT(G17):DA(H4) DA(G18):DT(H3) DA(G19):DT(H2) chainB ( 22) SER28 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER38 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) GLN39 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) GLN40 0 0 4 9 14 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER41 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) SER43 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG44 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) LYS61 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence yyraikkikeaaeasnrayltSskladmlgiSQQSaSRiiidlekngyitrtvtKrgqilnitekgldvlytefadlsrilaiknnvvitgtvtsgmgegryyvarkqyiiqfqeklgiipylgtlnikvdqaslpelrkirgfrgihiegfktedrtfgsvkafpakiqnipcfvimpertvytdvieiisdkylreeinlhdgdrvsvevyte >5tvp_AB:DNase_I-like; title=SUMO2 BOUND TO MOUSE TDP2 CATALYTIC DOMAIN WITH A 5'-PHOSPHORYLATED DNA TERNARY COMPLEX organism=MUS MUSCULUS DNA sequence DC(C3):DG(D10) DG(C4):DC(D9) DA(C5):DT(D8) DA(C6):DT(D7) DT(C7):DA(D6) DT(C8):DA(D5) DC(C9):DG(D4) DG(C10):DC(D3) chainB (200) ARG316 8 0 0 0 0 0 0 0 (201) ILE317 24 0 0 0 0 0 0 0 (202) PRO318 4 0 0 0 0 0 0 0 (205) TYR321 2 0 0 0 0 0 0 0 chainA (187) TRP307 0 0 0 0 0 0 0 1 (196) ARG316 0 0 0 0 0 0 0 9 (197) ILE317 0 0 0 0 0 0 0 23 (198) PRO318 0 0 0 0 0 0 0 6 (201) TYR321 0 0 0 0 0 0 0 1 prot.sequence sstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytWdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvv/gledsstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >5tvp_EI:DNase_I-like; title=SUMO2 BOUND TO MOUSE TDP2 CATALYTIC DOMAIN WITH A 5'-PHOSPHORYLATED DNA TERNARY COMPLEX organism=MUS MUSCULUS DNA sequence DC(F3):DG(J10) DG(F4):DC(J9) DA(F5):DT(J8) DA(F6):DT(J7) DT(F7):DA(J6) DT(F8):DA(J5) DC(F9):DG(J4) DG(F10):DC(J3) chainI (197) ILE317 0 0 0 0 0 0 0 20 (198) PRO318 0 0 0 0 0 0 0 5 (201) TYR321 0 0 0 0 0 0 0 1 chainE (196) ARG316 7 0 0 0 0 0 0 0 (197) ILE317 19 0 0 0 0 0 0 0 (198) PRO318 3 0 0 0 0 0 0 0 prot.sequence sstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl/sstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlrIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvv >5tvp_GO:DNase_I-like; title=SUMO2 BOUND TO MOUSE TDP2 CATALYTIC DOMAIN WITH A 5'-PHOSPHORYLATED DNA TERNARY COMPLEX organism=MUS MUSCULUS DNA sequence DC(H3):DG(P10) DG(H4):DC(P9) DA(H5):DT(P8) DA(H6):DT(P7) DT(H7):DA(P6) DT(H8):DA(P5) DC(H9):DG(P4) DG(H10):DC(P3) chainO (187) TRP307 0 0 0 0 0 0 0 1 (196) ARG316 0 0 0 0 0 0 0 2 (197) ILE317 0 0 0 0 0 0 0 22 (198) PRO318 0 0 0 0 0 0 0 6 (201) TYR321 0 0 0 0 0 0 0 1 chainG (187) TRP307 1 0 0 0 0 0 0 0 (196) ARG316 2 0 0 0 0 0 0 0 (197) ILE317 24 0 0 0 0 0 0 0 (198) PRO318 5 0 0 0 0 0 0 0 (201) TYR321 4 0 0 0 0 0 0 0 prot.sequence sstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytWdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvv/sstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytWdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvv >5tvp_KM:DNase_I-like; title=SUMO2 BOUND TO MOUSE TDP2 CATALYTIC DOMAIN WITH A 5'-PHOSPHORYLATED DNA TERNARY COMPLEX organism=MUS MUSCULUS DNA sequence DC(N3):DG(L10) DG(N4):DC(L9) DA(N5):DT(L8) DA(N6):DT(L7) DT(N7):DA(L6) DT(N8):DA(L5) DC(N9):DG(L4) DG(N10):DC(L3) chainK (187) TRP307 0 0 0 0 0 0 0 1 (196) ARG316 0 0 0 0 0 0 0 2 (197) ILE317 0 0 0 0 0 0 0 20 (198) PRO318 0 0 0 0 0 0 0 5 (201) TYR321 0 0 0 0 0 0 0 1 chainM (196) ARG316 7 0 0 0 0 0 0 0 (197) ILE317 19 0 0 0 0 0 0 0 (198) PRO318 5 0 0 0 0 0 0 0 (201) TYR321 1 0 0 0 0 0 0 0 prot.sequence sstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytWdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvv/sstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >5tvp_M:DNase_I-like; title=SUMO2 BOUND TO MOUSE TDP2 CATALYTIC DOMAIN WITH A 5'-PHOSPHORYLATED DNA TERNARY COMPLEX organism=MUS MUSCULUS DNA sequence DC(N3):DG(L10) DG(N4):DC(L9) DA(N5):DT(L8) DA(N6):DT(L7) DT(N7):DA(L6) DT(N8):DA(L5) DC(N9):DG(L4) DG(N10):DC(L3) chainM (196) ARG316 7 0 0 0 0 0 0 0 (197) ILE317 19 0 0 0 0 0 0 0 (198) PRO318 5 0 0 0 0 0 0 0 (201) TYR321 1 0 0 0 0 0 0 0 prot.sequence sstisfitwnidgldgcnlperargvcsclalyspdvvflqevippycaylkkraasytiitgneegyftaillkkgrvkfksqeiipfpntkmmrnllcvnvslggnefclmtshlestrehsaerirqlktvlgkmqeapdsttvifagdtnlrdqevikcgglpdnvfdaweflgkpkhcqytwdtkannnlRIPaaYkhrfdriffraeeghlipqsldlvglekldcgrfpsdhwgllctlnvvl >5tw1_FT:C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=CRYSTAL STRUCTURE OF A MYCOBACTERIUM SMEGMATIS TRANSCRIPTION INITIATION COMPLEX WITH RBPA organism=? DNA sequence DA(P1):DT(O26) DG(P2):DC(O25) DC(P3):DG(O24) DA(P4):DT(O23) DC(P5):DG(O22) DA(P6):DT(O21) DA(P7):DT(O20) DT(P8):DA(O19) DT(P9):DA(O18) DT(P10):DA(O17) DA(P11):DT(O16) DA(P12):DT(O15) DC(P13):DG(O14) DA(P14):DT(O13) DC(P15):DG(O12) DT(P16):DA(O11) DT(P17):DA(O10) DT(P18):DA(O9) DT(P19):DA(O8) DG(P20):DC(O7) DT(P21):DA(O6) DC(P22):DG(O5) DA(P23):DT(O4) DA(P24):DT(O3) DG(P25):DC(O2) DC(P26):DG(O1) chainF (125) TRP287 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) TRP288 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) GLN291 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) THR294 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) ARG295 0 6 11 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) VAL308 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) HIS309 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) GLU312 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) LEU427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (273) THR437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 (274) ARG438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 17 5 0 0 0 0 0 (275) GLU439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 6 1 0 0 (276) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 (278) ARG442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (279) GLN443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 chainT ( 9) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 prot.sequence adsvraylkqigkvallnaeeevelakrieaglyatqklaelaekgeklpvqqrrdmqwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatWWirQaiTRamadqartiripVHmvEvinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigddsqlgdfiedseavvavdavsftllqdqlqsvletlsereagvvrlrfgltdgqprtLdeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyld/iddldltvRsynclkregvhtvgelvartesdlldirnfgqksidevkiklhq >5tw1_T:C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=CRYSTAL STRUCTURE OF A MYCOBACTERIUM SMEGMATIS TRANSCRIPTION INITIATION COMPLEX WITH RBPA organism=? DNA sequence DG(O1):DC(P26) DC(O2):DG(P25) DT(O3):DA(P24) DT(O4):DA(P23) DG(O5):DC(P22) DA(O6):DT(P21) DC(O7):DG(P20) DA(O8):DT(P19) DA(O9):DT(P18) DA(O10):DT(P17) DA(O11):DT(P16) DG(O12):DC(P15) DT(O13):DA(P14) DG(O14):DC(P13) DT(O15):DA(P12) DT(O16):DA(P11) DA(O17):DT(P10) DA(O18):DT(P9) DA(O19):DT(P8) DT(O20):DA(P7) DT(O21):DA(P6) DG(O22):DC(P5) DT(O23):DA(P4) DG(O24):DC(P3) DC(O25):DG(P2) DT(O26):DA(P1) chainT ( 9) ARG259 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iddldltvRsynclkregvhtvgelvartesdlldirnfgqksidevkiklhq >5twq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=POST-CATALYTIC NICKED COMPLEX OF HUMAN POLYMERASE MU WITH NEWLY INCORPORATED UTP organism=HOMO SAPIENS DNA sequence DG(D1):DC(T4) DC(D2):DG(T3) DC(D3):DG(T2) DG(D4):DC(T1) chainA ( 38) ARG175 5 0 0 0 ( 40) LEU177 3 0 0 0 ( 41) THR178 11 3 0 0 ( 44) ARG181 2 0 0 0 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsegRlLTfcRaasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqqqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqfersfcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsklfqrelrrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >5tws_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=POST-CATALYTIC COMPLEX OF HUMAN POLYMERASE MU (H329A) WITH NEWLY INCORPORATED UTP organism=HOMO SAPIENS DNA sequence DC(T1):DG(D4) DG(T2):DC(D3) DG(T3):DC(D2) DC(T4):DG(D1) chainA ( 38) ARG175 0 0 0 4 ( 40) LEU177 0 0 0 3 ( 41) THR178 0 0 3 10 ( 44) ARG181 0 0 0 2 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsegRlLTfcRaasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqqqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqgadvdflithpkegqeagllprvmcrlqdqglilyhqfersfcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsklfqrelrrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >5txl_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DATP organism=? DNA sequence DG(T707):DG(P822) DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) MET184 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >5txl_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DATP organism=? DNA sequence DG(T707):DG(P822) DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) MET184 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkIttesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5txl_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DATP organism=? DNA sequence DC(F803):DG(E725) DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) DC(F818):DC(E711) DG(F819):DG(E710) DC(F820):DC(E709) DC(F821):DG(E708) DG(F822):DG(E707) chainC ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 (117) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (159) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 (186) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (358) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (450) ARG448 0 1 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLN475 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5txm_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DDATP organism=? DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) DG(P822):DG(T707) chainA ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 (117) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (159) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 (186) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (358) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (450) ARG448 0 0 4 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLN475 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkIttesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5txm_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DDATP organism=? DNA sequence DC(F803):DG(E725) DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) DC(F818):DC(E711) DG(F819):DG(E710) DC(F820):DC(E709) DC(F821):DG(E708) DG(F822):DG(E707) chainC ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 (117) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (159) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 (186) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (358) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (450) ARG448 0 1 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLN475 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5txn_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF Q151M MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DATP organism=? DNA sequence DG(T707):DG(P822) DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 95) ILE94 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) PRO157 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) MET184 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 6 0 0 (476) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >5txn_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF Q151M MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DATP organism=? DNA sequence DG(T707):DG(P822) DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 95) ILE94 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) PRO157 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) MET184 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 6 0 0 (476) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavQkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5txn_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF Q151M MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DATP organism=? DNA sequence DG(E707):DG(F822) DG(E708):DC(F821) DC(E709):DC(F820) DG(E710):DG(F819) DC(E711):DC(F818) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 95) ILE94 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) PRO157 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) MET184 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 1 0 chainD prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavQkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5txo_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF Q151M COMPLEX (A62V, V75I, F77L, F116Y, Q151M) MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DATP organism=? DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) DG(P822):DG(T707) chainA ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 (117) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (159) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 (186) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (358) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (450) ARG448 0 0 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLN475 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfvikkkdstkwrklidlrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYysvpldedfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5txo_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF Q151M COMPLEX (A62V, V75I, F77L, F116Y, Q151M) MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DATP organism=? DNA sequence DC(F803):DG(E725) DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) DC(F818):DC(E711) DG(F819):DG(E710) DC(F820):DC(E709) DC(F821):DG(E708) DG(F822):DG(E707) chainC ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 (117) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (159) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 (186) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (358) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (450) ARG448 0 0 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfvikkkdstkwrklidlrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYysvpldedfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5txp_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF Q151M COMPLEX (A62V, V75I, F77L, F116Y, Q151M) MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DDATP organism=? DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) DG(P822):DG(T707) chainA ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 (117) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (159) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 (186) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (267) ASN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (450) ARG448 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfvikkkdstkwrklidlrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYysvpldedfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >5txp_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF Q151M COMPLEX (A62V, V75I, F77L, F116Y, Q151M) MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DDATP organism=? DNA sequence DG(T707):DG(P822) DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO157 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) MET184 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN265 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfvikkkdstkwrklidlrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYysvpldedfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsklLrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5txp_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF Q151M COMPLEX (A62V, V75I, F77L, F116Y, Q151M) MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DDATP organism=? DNA sequence DG(E707):DG(F822) DG(E708):DC(F821) DC(E709):DC(F820) DG(E710):DG(F819) DC(E711):DC(F818) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 96) ILE94 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO157 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) MET184 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 1 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfvikkkdstkwrklidlrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYysvpldedfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >5tye_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE MU PRODUCT COMPLEX, 10 MM MG2+ (60 MIN) organism=HOMO SAPIENS DNA sequence DA(T5):DT(P5) DT(T6):DA(P4) DA(T7):DT(P3) DC(T8):DG(P2) DG(T9):DC(P1) chainA (231) ARG387 0 1 5 0 0 (233) PHE389 0 0 2 1 0 (270) LYS438 18 0 0 0 0 (273) GLN441 2 0 0 0 0 (274) ARG442 24 0 0 0 0 (277) ARG445 7 4 0 0 0 prot.sequence wmpayacqrptplthhntglsealeilaeaagfegsegrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqQqkaglqhhqdlstpvlrsdvalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqafeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >5tyf_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE MU PRODUCT COMPLEX, 10 MM MG2+ (270 MIN) organism=HOMO SAPIENS DNA sequence DC(P1):DG(T9) DG(P2):DC(T8) DT(P3):DA(T7) DA(P4):DT(T6) DT(P5):DA(T5) chainA (232) ARG387 0 0 5 1 0 (234) PHE389 0 1 2 0 0 (271) LYS438 0 0 0 0 19 (274) GLN441 0 0 0 0 2 (275) ARG442 0 0 0 0 24 (278) ARG445 0 0 0 4 7 prot.sequence wmpayacqrptplthhntglsealeilaeaagfegsegrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqQqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqafeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >5tyg_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE MU PRODUCT COMPLEX, 10 MM MG2+ (960 MIN) organism=HOMO SAPIENS DNA sequence DA(T5):DT(P5) DT(T6):DA(P4) DA(T7):DT(P3) DC(T8):DG(P2) DG(T9):DC(P1) chainA (232) ARG387 0 1 5 0 0 (234) PHE389 0 0 2 1 0 (271) LYS438 20 0 0 0 0 (274) GLN441 2 0 0 0 0 (275) ARG442 24 0 0 0 0 (278) ARG445 7 4 0 0 0 prot.sequence wmpayacqptplthhntglsealeilaeaagfegsegrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqQqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqhafeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >5tyx_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE MU PRODUCT COMPLEX, MN2+ (15 MIN) organism=HOMO SAPIENS DNA sequence DC(P1):DG(T9) DG(P2):DC(T8) DT(P3):DA(T7) DA(P4):DT(T6) DT(P5):DA(T5) chainA (230) ARG387 0 0 5 1 0 (232) PHE389 0 1 2 0 0 (269) LYS438 0 0 0 0 18 (272) GLN441 0 0 0 0 2 (273) ARG442 0 0 0 0 23 (276) ARG445 0 0 0 4 7 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsegrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqQqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqfeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsKlfQRelRrfsrkekglwlnShglfdpeqktffqaaseedifrhlgleylppeqrna >5tyy_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE MU PRODUCT COMPLEX, MN2+ (60 MIN) organism=HOMO SAPIENS DNA sequence DA(T5):DT(P5) DT(T6):DA(P4) DA(T7):DT(P3) DC(T8):DG(P2) DG(T9):DC(P1) chainA (231) ARG387 0 1 5 0 0 (233) PHE389 0 0 2 1 0 (270) LYS438 16 0 0 0 0 (273) GLN441 2 0 0 0 0 (274) ARG442 21 0 0 0 0 (277) ARG445 6 4 0 0 0 prot.sequence wmpayacqrptplthhntglsealeilaeaagfegsegrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqQqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqfeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >5tyz_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE MU PRODUCT COMPLEX, MN2+ (960 MIN) organism=HOMO SAPIENS DNA sequence DC(P1):DG(T9) DG(P2):DC(T8) DT(P3):DA(T7) DA(P4):DT(T6) DT(P5):DA(T5) chainA (231) ARG387 0 0 5 1 0 (233) PHE389 0 1 2 0 0 (270) LYS438 0 0 0 0 16 (273) GLN441 0 0 0 0 2 (274) ARG442 0 0 0 0 24 (277) ARG445 0 0 0 4 8 prot.sequence wmpayacqrptplthhntglsealeilaeaagfegsegrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqQqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqfeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >5tzv_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH G:T MISMATCH AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 29) HIS34 35 0 0 0 0 ( 30) LYS35 9 0 0 0 0 ( 33) ALA38 5 0 0 0 0 prot.sequence apqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5u01_A:p53-like_transcription_factors;E_set_domains; title=COOPERATIVE DNA BINDING BY TWO RELA DIMERS organism=MUS MUSCULUS DNA sequence DA(F201):DT(E226) DG(F202):DC(E225) DC(F203):DG(E224) DG(F204):DC(E223) DG(F205):DC(E222) DA(F206):DT(E221) DA(F207):DT(E220) DA(F208):DT(E219) DT(F209):DA(E218) DT(F210):DA(E217) DC(F211):DG(E216) DC(F212):DG(E215) DC(F213):DG(E214) DG(F214):DC(E213) DG(F215):DC(E212) DG(F216):DC(E211) DA(F217):DT(E210) DA(F218):DT(E209) DT(F219):DA(E208) DT(F220):DA(E207) DT(F221):DA(E206) DC(F222):DG(E205) DC(F223):DG(E204) DG(F224):DC(E203) DC(F225):DG(E202) DT(F226):DA(E201) chainA ( 15) ARG33 0 0 0 0 0 0 0 0 0 1 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG35 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) TYR36 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 0 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG41 0 0 0 0 0 0 0 0 0 0 0 16 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ARG187 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pyveiieqpkqrgmRfRYkCEgRsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd >5u01_ABCD:p53-like_transcription_factors;E_set_domains; title=COOPERATIVE DNA BINDING BY TWO RELA DIMERS organism=MUS MUSCULUS DNA sequence DA(E201):DT(F226) DG(E202):DC(F225) DC(E203):DG(F224) DG(E204):DC(F223) DG(E205):DC(F222) DA(E206):DT(F221) DA(E207):DT(F220) DA(E208):DT(F219) DT(E209):DA(F218) DT(E210):DA(F217) DC(E211):DG(F216) DC(E212):DG(F215) DC(E213):DG(F214) DG(E214):DC(F213) DG(E215):DC(F212) DG(E216):DC(F211) DA(E217):DT(F210) DA(E218):DT(F209) DT(E219):DA(F208) DT(E220):DA(F207) DT(E221):DA(F206) DC(E222):DG(F205) DC(E223):DG(F204) DG(E224):DC(F203) DC(E225):DG(F202) DT(E226):DA(F201) chainA ( 15) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 1 0 0 0 0 0 0 0 0 0 ( 17) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 ( 18) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 ( 23) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 17 16 0 0 0 0 0 0 0 0 0 0 0 (169) ARG187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 chainB ( 15) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 0 ( 17) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 3 0 0 ( 18) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 ( 23) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 8 8 0 ( 24) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 (169) ARG187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 chainC ( 15) ARG33 0 0 0 0 0 0 0 0 0 1 9 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG35 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) TYR36 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG41 0 0 0 0 0 0 0 0 0 0 0 4 9 5 0 0 0 0 0 0 0 0 0 0 0 0 (169) ARG187 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 15) ARG33 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG35 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) TYR36 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) CYS38 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU39 0 0 0 1 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) SER42 0 2 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ARG187 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pyveiieqpkqrgmRfRYkCEgRsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/pyveiieqpkqrgmRfRYkCEgRSagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/pyveiieqpkqrgmRfRYkcEgRsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd/pyveiieqpkqrgmRfRYkCEgrSagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd >5u07_CHN: title=CRISPR RNA-GUIDED SURVEILLANCE COMPLEX organism=THERMOBIFIDA FUSCA YX DNA sequence DC(M44):DG(O11) DT(M45):DA(O10) DT(M46):DA(O9) DC(M47):DG(O8) DG(M48):DC(O7) DT(M49):DA(O6) DC(M50):DG(O5) DC(M51):DG(O4) DG(M52):DC(O3) DC(M53):DG(O2) DG(M54):DC(O1) chainC (176) MET196 0 16 18 0 0 0 0 0 0 0 0 (188) ARG208 0 0 9 6 0 0 0 0 0 0 0 (364) GLN384 30 1 0 0 0 0 0 0 0 0 0 (366) ARG386 3 0 0 0 0 0 0 0 0 0 0 chainH chainN prot.sequence ppsfdvtiapwliarsrdvlaapemlglrdvlirshelsdveiplppgaavlwrilalitaritgldqnpkrkwqarrsqilskgrldpeavdayfadyserfdlfhperpwlqdprlreecpktsgvnklawgrtagenqvwlgghhhdldphpldsaeavwhllatlgygpsgMctarvvrgrseRnvtagplrgtvsyhplgrtlfeslilnipypgtgaadlafweqpelndplglpeesaglagilrldhfrhavllhpspdgshvvdawvtwawrernispeldpyliyqtskegrvyprpaeaeraiwrdldallhygedgnyrptildnctplaqvpqevldslrlrafgfdqdgQaRdkqwftattpavldnenarivrritlarkaaealgrrlekackeawkesnsgpwvqhgmsrywakaepvfwnivydrpaqgytpgmagpgnafnlvalaaydevtgpycerprvakvverhrstlfs/tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsvlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrmlaeLpstevdgavqfAhaftvhgttvevdfftavddipkendhgsghmnagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvAaA/sgfllrlagpmqswgehsmfgerdtlpypsrsgligmfaaaqgvrrgdpldrykelkftvrvdrpgvrlvdfhtiggglpkertvptaagerrdpkkativtsrsyladavftvavtgpeadtiadalaapywqpylgrrafvpdpllvlrrrvadpvrelveavplphrrveedAatvlvdliyeeGtltvlndvplsfdsksrrystrqirvvptevpatlvagpgrdyqnklftyvkq >5u07_D: title=CRISPR RNA-GUIDED SURVEILLANCE COMPLEX organism=THERMOBIFIDA FUSCA YX DNA sequence DT(M34) DT(M35) DA(M36) DT(M37) DC(M38) DA(M39) DC(M40) DT(M41) DG(M42) DG(M43) DC(M44) DT(M45) DT(M46) DC(M47) DG(M48) DT(M49) DC(M50) DC(M51) DG(M52) DC(M53) DG(M54) chainD ( 96) PHE204 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) HIS216 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) SER218 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) HIS220 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) MET221 0 0 0 14 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ASN222 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgnvsvnlfgrmlaelpstevdgavqfahaftvhgttvevdfFtavddipkendHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf >5u07_DG: title=CRISPR RNA-GUIDED SURVEILLANCE COMPLEX organism=THERMOBIFIDA FUSCA YX DNA sequence DT(M34) DT(M35) DA(M36) DT(M37) DC(M38) DA(M39) DC(M40) DT(M41) DG(M42) DG(M43) DC(M44) DT(M45) DT(M46) DC(M47) DG(M48) DT(M49) DC(M50) DC(M51) DG(M52) DC(M53) DG(M54) chainD ( 96) PHE204 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) HIS216 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) SER218 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) HIS220 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) MET221 0 0 0 14 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ASN222 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (172) MET173 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA175 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgnvsvnlfgrmlaelpstevdgavqfahaftvhgttvevdfFtavddipkendHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf/tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsvlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttvevdfftavddipkendhgsghmnagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaa >5u0a_ACHJLN: title=CRISPR RNA-GUIDED SURVEILLANCE COMPLEX organism=THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) DNA sequence DG(M16):DC(O50) DC(M17):DG(O49) DC(M18):DG(O48) DT(M19):DA(O47) DG(M20):DC(O46) DG(M21):DC(O45) DC(M22):DG(O44) DG(M23):DC(O43) DA(M24):DT(O42) DC(M25):DG(O41) DA(M26):DT(O40) DG(M27):DC(O39) DC(M28):DG(O38) DC(M29):DG(O37) DC(M30):DG(O36) DA(M31):DT(O35) DC(M32):DG(O34) DA(M33):DT(O33) DT(M34):DA(O32) DG(M35):DC(O31) DG(M36):DC(O30) DC(M37):DA(O14) DA(M38):DC(O13) DT(M39):DC(O12) DT(M40):DG(O11) DC(M41):DA(O10) DC(M42):DA(O9) DA(M43):DG(O8) DC(M44):DC(O7) DT(M45):DA(O6) DT(M46):DG(O5) DA(M47):DG(O4) DT(M48):DC(O3) DC(M49):DG(O2) DA(M50):DC(O1) chainA (133) ALA165 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) GLN166 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (180) MET196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 5 0 0 0 0 0 0 0 0 (302) SER318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) LYS319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ARG322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) GLN384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 (487) ARG522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (489) ARG524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 chainH (217) SER218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (219) HIS220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 (220) MET221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 19 0 0 0 0 0 0 0 (221) ASN222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainJ ( 1) TYR5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ALA26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ALA29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ARG160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (126) TYR182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 chainL ( 6) GLN8 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ALA26 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ALA29 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG33 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) TYR182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN prot.sequence twltkivpdlfrtagnlhrklirlssdlgeerianprqqllfrieetrnelyllvqshsplrvdrlgpgyhqmrnldpldkgsrvryrivasptkrlgrsetqrltwlrgaaaeewwhsraaanglellstyAQddvrdpgtadrsrkirhpavrfdgeavisdvdavrhavlngigrgksygcgllslali/ppsfdvtiapwliarsrdvlaapemlglrdvlirshelsdveiplppgaavlwrilalitaritgldqppnknpkrkwqarrsqilskgrldpeavdayfadyserfdlfhperpwlqdprlreecpktsgvnklawgrtagenqvwlgghhhdldphpldsaeavwhllatlgygpsgMctarvvrgrsernvtagplrgtvsyhplgrtlfeslilnipypgtgaadlafweqpelndplglpeesaglagilrldhfrhavllhpspdgshvvdawvtwawrernispeldpyliyqtSKegRvyprpaeaeraiwrdldallhygnyrptildnctplaqvpqevldslrlrafgfdqdgQardkqwftattpavlrwladretddnenarivrritlarkaaealgrrlekackeawkesnsgpwvqhgmsrywakaepvfwnivydrpaqgytpgmagpgnafnlvalaaydevtgpyceRpRvakvverhrstlfs/tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsvlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrmlaelpstevdgavqfahaftvhgttvevdfftavddipkendhgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaa/YilqhadalvkrvsklivnepAarAalRRgvglapedprmlaahrvvapyvpvvhaverafyavaaimaaqprsardqrrpnlgvslaqavfdkglnadsteqRlhliarqnldgvhrhlprlvlYlrsdqvhidwgilirdlarwghtprhvarewvqdyhrtletltrqae/sdyilQhadalvkrvsklivnepAarAalrRgvmlaahrvvapyvpvhaverafyavaaimaaqprsardqrpnlgvslaqavfdkglnadsteqrlhliarqnldgvhrhlprlvlYlrsdqvhidwgilirdlarwghtprhvarewvqdyhrtletltrqae/sgfllRlagpmqswgehsmfgerDtlPypsRsgligmfaaaqgvrrgdpldrykelkftvrvdrpgvrlvdfhtiggglpkertvptaagerrdpkkativtsrsyladavftvavtGpeadtiadalaapywqpylgrrafvpdpllvlrrrvadpvrelveavplphrrveedaatvlvdliyetrtltvlndvplsfdsksrrystrqirvvptevpatlvagpgrdyqnklftyvkq >5u0a_DEFGI: title=CRISPR RNA-GUIDED SURVEILLANCE COMPLEX organism=THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) DNA sequence DG(M16) DC(M17) DC(M18) DT(M19) DG(M20) DG(M21) DC(M22) DG(M23) DA(M24) DC(M25) DA(M26) DG(M27) DC(M28) DC(M29) DC(M30) DA(M31) DC(M32) DA(M33) DT(M34) DG(M35) DG(M36) DC(M37) DA(M38) DT(M39) DT(M40) DC(M41) DC(M42) DA(M43) DC(M44) DT(M45) DT(M46) DA(M47) DT(M48) DC(M49) DA(M50) DC(M51) DT(M52) DG(M53) DG(M54) DC(M55) DT(M56) DT(M57) DC(M58) DG(M59) DT(M60) DC(M61) DC(M62) DG(M63) DC(M64) DG(M65) chainD ( 96) PHE204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) HIS216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) SER218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) HIS220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) MET221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ASN222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (114) VAL115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) MET173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) PHE204 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) ASP215 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) HIS216 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER218 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS220 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) MET221 0 0 0 0 0 0 0 0 16 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ASN222 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (114) VAL115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) MET173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) MET221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ASN222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (114) VAL115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) MET173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) PHE204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) HIS216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) MET221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ASN222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (114) VAL115 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) MET173 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA175 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgnvsvnlfgrmlaelpstevdgavqfahaftvhgttvevdfFtavddipkendHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf/tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttvevdfFtavddipkenDHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf/tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttvevdfftavddipkendhgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf/tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttvevdfFtavddipkendHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaa/tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttsagtfyryanvnldrlventgdaqtartavaeflraflstvpstlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaa >5u0a_E: title=CRISPR RNA-GUIDED SURVEILLANCE COMPLEX organism=THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) DNA sequence DG(M16) DC(M17) DC(M18) DT(M19) DG(M20) DG(M21) DC(M22) DG(M23) DA(M24) DC(M25) DA(M26) DG(M27) DC(M28) DC(M29) DC(M30) DA(M31) DC(M32) DA(M33) DT(M34) DG(M35) DG(M36) DC(M37) DA(M38) DT(M39) DT(M40) DC(M41) DC(M42) DA(M43) DC(M44) DT(M45) DT(M46) DA(M47) DT(M48) DC(M49) DA(M50) DC(M51) DT(M52) DG(M53) DG(M54) DC(M55) DT(M56) DT(M57) DC(M58) DG(M59) DT(M60) DC(M61) DC(M62) DG(M63) DC(M64) DG(M65) chainE (114) VAL115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) MET173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) PHE204 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) ASP215 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) HIS216 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER218 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS220 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) MET221 0 0 0 0 0 0 0 0 16 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ASN222 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttvevdfFtavddipkenDHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf >5u1c_A:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF TETRAMERIC HIV-1 STRAND TRANSFER COMPLEX INTASOME organism=? DNA sequence DA(J10):DT(I28) DA(J11):DT(I27) DA(J12):DT(I26) DT(J13):DA(I25) DC(J14):DG(I24) DT(J15):DA(I23) DC(J16):DG(I22) DT(J17):DA(I21) DA(J18):DT(I20) DG(J19):DC(I19) DC(J20):DG(I18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 8 (146) GLN146 0 0 0 0 0 0 0 0 0 0 18 (152) GLN152 0 0 0 0 0 0 0 0 0 0 2 (153) SER153 0 0 0 0 0 0 0 0 4 4 0 (156) LYS156 0 0 0 0 0 0 0 0 7 6 0 prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviQSmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiifrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiir >5u1c_AB:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF TETRAMERIC HIV-1 STRAND TRANSFER COMPLEX INTASOME organism=? DNA sequence DG(I18):DC(J20) DC(I19):DG(J19) DT(I20):DA(J18) DA(I21):DT(J17) DG(I22):DC(J16) DA(I23):DT(J15) DG(I24):DC(J14) DA(I25):DT(J13) DT(I26):DA(J12) DT(I27):DA(J11) DT(I28):DA(J10) chainA ( 51) HIS51 8 0 0 0 0 0 0 0 0 0 0 (146) GLN146 18 0 0 0 0 0 0 0 0 0 0 (152) GLN152 2 0 0 0 0 0 0 0 0 0 0 (153) SER153 0 4 4 0 0 0 0 0 0 0 0 (156) LYS156 0 6 7 0 0 0 0 0 0 0 0 chainB prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviQSmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiifrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiir/cspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklaGrwpvktvhtdngsnftsttvkaacwwagiqsmnkelkkiigqvrdqaehlktavqmavfihnfkagerivdiinfrvyyrdsrdpvwkgpakllWkgegaVViqDnsdikvvprrkakiir >5u1c_CD:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF TETRAMERIC HIV-1 STRAND TRANSFER COMPLEX INTASOME organism=? DNA sequence DG(E18):DC(F20) DC(E19):DG(F19) DT(E20):DA(F18) DA(E21):DT(F17) DG(E22):DC(F16) DA(E23):DT(F15) DG(E24):DC(F14) DA(E25):DT(F13) DT(E26):DA(F12) DT(E27):DA(F11) DT(E28):DA(F10) chainC ( 51) HIS51 8 0 0 0 0 0 0 0 0 0 0 (146) GLN146 18 0 0 0 0 0 0 0 0 0 0 (152) GLN152 2 0 0 0 0 0 0 0 0 0 0 (153) SER153 0 4 4 0 0 0 0 0 0 0 0 (156) LYS156 0 6 7 0 0 0 0 0 0 0 0 chainD prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviQSmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiifrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiir/cspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklaGrwpvktvhtdngsnftsttvkaacwwagiqsmnkelkkiigqvrdqaehlktavqmavfihnfkagerivdiinfrvyyrdsrdpvwkgpakllWkgegaVViqDnsdikvvprrkakiir >5u2r_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=PRECATALYTIC TERNARY COMPLEX OF HUMAN DNA POLYMERASE BETA WITH GAPPED DNA SUBSTARTE, INCOMING L-DCTP AND CA2+ organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 37 0 0 0 0 ( 26) LYS35 7 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrsehh >5u2s_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=PRE-CATALYTIC TERNARY COMPLEX OF HUMAN DNA POLYMERASE BETA WITH GAPPED DNA SUBSTRATE INCOMING (-)3TC-TP AND CA2+. organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 29) HIS34 0 0 0 0 39 ( 30) LYS35 0 0 0 0 9 ( 33) ALA38 0 0 0 0 5 prot.sequence apqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdr >5u2t_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=PRE-CATALYTIC TERNARY COMPLEX OF HUMAN DNA POLYMERASE BETA WITH GAPPED DNA SUBSTRATE INCOMING (-)FTC-TP AND CA2+. organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 29) HIS34 38 0 0 0 0 ( 30) LYS35 8 0 0 0 0 ( 33) ALA38 5 0 0 0 0 prot.sequence apqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahakgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrs >5u30_A: title=CRYSTAL STRUCTURE OF AACC2C1-SGRNA-EXTENDED TARGET DNA TERNARY COMPLEX organism=Alicyclobacillus acidoterrestris DNA sequence DG(C21):DC(D8) DA(C22):DT(D7) DA(C23):DT(D6) DC(C24):DG(D5) DC(C25):DG(D4) DA(C26):DT(D3) DC(C27):DG(D2) chainA (119) GLN118 28 0 0 0 0 0 0 (120) GLN119 36 0 0 0 0 0 0 (123) ARG122 3 8 8 0 0 0 0 (143) ALA142 0 0 0 3 1 0 0 (145) ASN144 0 5 1 0 0 0 0 (207) ARG208 0 0 0 0 0 3 1 (217) ARG218 0 0 3 1 0 0 0 (399) ASN400 0 4 11 0 0 0 0 prot.sequence smavksikvklrlddmpeiraglwklhkevnagvryytewlsllrqenlyrrspngdgeqecdktaeeckaellerlrarqvenghrgpagsddellqlarqlyellvpqaigakgdaQQiaRkflspladkdavgglgiakAgNkprwvrmreageweeekekaetrksadrtadvlraladfglkplmrvytdsemssvewkplRkgqavrtwdRdmfqqaiermmsweswnqrvgqeyaklveqknrfeqknfvgqehlvhlvnqlqqdmkeaspgleskeqtahyvtgralrgsdkvfekwgklapdapfdlydaeiknvqrrntrrfgshdlfaklaepeyqalwredasfltryavynsilrklnhakmfatftlpdatahpiwtrfdklggNlhqytflfnefgerrhairfhkllkvengvarevddvtvpismseqldnllprdpnepialyfrdygaeqhftgefggakiqcrrdqlahmhrrrrdvylnvsvrvqsqseargerrppyaavfrlvgdnhrafvhfdklsdylaehpddgklgsegllsglrvmsvalglrtsasisvfrvarkdelkpnskgrvpfffpikgndnlvavhersqllklpgeteskdlraireerqrtlrqlrtqlaylrllvrcgsedvgrrerswaklieqpvdaanhmtpdwreafenelqklkslhgicsdkewmdavyesvrrvwrhmgkqvrdwrkdvrsgerpkirgyakdvvggnsieqieylerqykflkswsffgkvsgqviraekgsrfaitlrehidhakedrlkkladriimealgyvyaldergkgkwvakyppcqlillaelseyqfnndrppsennqlmqwshrgvfqelinqaqvhdllvgtmyaafssrfdartgapgircrrvparctqehnpepfpwwlnkfvvehtldacplraddliptgegeifvspfsaeegdfhqihaalnaaqnlqqrlwsdfdisqirlrcdwgevdgelvliprltgkrtadsysnkvfytntgvtyyerergreksvvlmrdpsgiinrgnwtrqkefwsmvnqriegylvkqirs >5u33_A: title=CRYSTAL STRUCTURE OF AACC2C1-SGRNA-EXTENDED NON-TARGET DNA TERNARY COMPLEX organism=? DNA sequence DG(D2):DC(C27) DT(D3):DA(C26) DG(D4):DC(C25) DG(D5):DC(C24) DT(D6):DA(C23) DT(D7):DA(C22) DC(D8):DG(C21) chainA (119) GLN118 0 0 0 0 0 0 29 (120) GLN119 0 0 0 0 0 0 35 (123) ARG122 0 0 0 1 8 8 3 (124) LYS123 0 0 0 0 0 1 0 (143) ALA142 0 0 1 2 0 0 0 (145) ASN144 0 0 0 0 1 4 0 (207) ARG208 1 3 0 0 0 0 0 (217) ARG218 0 0 0 1 3 0 0 (399) ASN400 0 0 0 0 10 6 0 prot.sequence smavksikvklrlddmpeiraglwklhkevnagvryytewlsllrqenlyrrspngdgeqecdktaeeckaellerlrarqvenghrgpagsddellqlarqlyellvpqaigakgdaQQiaRKflspladkdavgglgiakAgNkprwvrmreageweeekekaetrksadrtadvlraladfglkplmrvytdsemssvewkplRkgqavrtwdRdmfqqaiermmsweswnqrvgqeyaklveqknrfeqknfvgqehlvhlvnqlqqdmkeaspgleskeqtahyvtgralrgsdkvfekwgklapdapfdlydaeiknvqrrntrrfgshdlfaklaepeyqalwredasfltryavynsilrklnhakmfatftlpdatahpiwtrfdklggNlhqytflfnefgerrhairfhkllkvengvarevddvtvpismseqldnllprdpnepialyfrdygaeqhftgefggakiqcrrdqlahmhrrrrdvylnvsvrvqsqseargerrppyaavfrlvgdnhrafvhfdklsdylaehpddgklgsegllsglrvmsvalglrtsasisvfrvarkdelkpnskgrvpfffpikgndnlvavhersqllklpgeteskdlraireerqrtlrqlrtqlaylrllvrcgsedvgrrerswaklieqpvdaanhmtpdwreafenelqklkslhgicsdkewmdavyesvrrvwrhmgkqvrdwrkdvrsgerpkirgyakdvvggnsieqieylerqykflkswsffgkvsgqviraekgsrfaitlrehidhakedrlkkladriimealgyvyaldergkgkwvakyppcqlillaelseyqfnndrppsennqlmqwshrgvfqelinqaqvhdllvgtmyaafssrfdartgapgircrrvparctqehnpepfpwwlnkfvvehtldacplraddliptgegeifvspfsaeegdfhqihaalnaaqnlqqrlwsdfdisqirlrcdwgevdgelvliprltgkrtadsysnkvfytntgvtyyerergreksvvlmrdpsgiinrgnwtrqkefwsmvnqriegylvkqirs >5u8g_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA CRYSTALLIZED IN PEG 400 organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 24) HIS34 35 0 0 0 0 ( 25) LYS35 7 0 0 0 0 ( 28) ALA38 5 0 0 0 0 prot.sequence lnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftspkllhqvveqlqkvhfitdtlskgetkfmgvcqlpseyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5u8h_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA G231D CRYSTALLIZED IN PEG 400 organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 26) HIS34 35 0 0 0 0 ( 27) LYS35 8 0 0 0 0 ( 30) ALA38 5 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftskllhqvveqlqkvhfitdtlskdetkfmgvcqlpseyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5u8i_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA S229L CRYSTALLIZED IN PEG 400 organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 26) HIS34 35 0 0 0 0 ( 27) LYS35 8 0 0 0 0 ( 30) ALA38 5 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftskllhqvveqlqkvhfitdtllkgetkfmgvcqlpskkeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5u8s_25:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF EUKARYOTIC CMG HELICASE AT A REPLICATION FORK organism=? DNA sequence DA(F1) DT(F2) DC(F3) DG(F4) DA(F5) DT(F6) DC(F7) DG(F8) DA(F9) DT(F10) DC(F11) DG(F12) DA(F13) DT(F14) DT(F15) DT(F16) DT(F17) DT(F18) DT(F19) DT(F20) DT(F21) DT(F22) DT(F23) DT(F24) DT(F25) DT(F26) chain2 (368) ARG581 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 (402) GLN615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (420) LYS633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 chain5 (362) ARG455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 (367) ARG460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 prot.sequence pnvsrtiarelksflleytdetgrsvygarirtlgemnseslevnyrhlaeskailalflakcpeemlkifdlvameatelhypdyarihseihvrisdfptiyslrelresnlsslvrvtgvvtrrtgvfpqlkyvkfnclkcgsilgpffqdsneeirisfctnckskgpfrvngektvyrnyqrvtlqeapgtvppgrlprhrevilladlvdvskpgeevevtgiyknnydgnlnakngfpvfatiieansikrrefswteeeerefrkisrdrgiidkiissmapsiyghrdiktavacslfggvpknvngkhsirgdinvlllgdpgtaksqilkyvektahravfatgqgasavgltasvRkdpitkewtleggalvladkgvclidefdkmndQdrtsiheameqqsisisKagivttlqarcsiiaaanpnggrynstlplaqnvsltepilsrfdilcvvrdlvdeeaderlatfvvdshvrsspipqellmkyihyartkiypklhqmdmdkvsrvyadlrresistgsfpitvrhlesilriaesfakmrlsefvssydldraikvvvdsfvdaqkvsvrrqlrrsfaiy/nteiiksfknfilefrldsqfiyrdqlrnnilvknysltvnmehligynediykklsdepsdiiplfetaitqvakrisinslptfqlilnsnanqiplrdldsehvskivrlsgiiistsvlssratylsimcrncrhttsitinnfntgntvslprscncgpdpyiiihesskfidqqflklqeipelvpvgemprnltmtcdryltnkvipgtrvtivgiysiynsknsgvairtpyikilgiqsdvetvtmfteeeeeeflqlsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllgdpgtaksqllkfvekvspiavytsgkgssaagltasvqRdpmtRefyleggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanpiygryddlkspgdnidfqttilsrfdmifivkddhneerdisianhvinihtgnanamqnqqeengseisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinelesterpitirqleaiiriteslaklelspiaqerhvdeairlfqastmdaas >5u8s_3467:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF EUKARYOTIC CMG HELICASE AT A REPLICATION FORK organism=? DNA sequence DA(F1):DT(G18) DT(F2):DA(G17) DC(F3):DG(G16) DG(F4):DC(G15) DA(F5):DT(G14) DT(F6):DA(G13) DC(F7):DG(G12) DG(F8):DC(G11) DA(F9):DT(G10) DT(F10):DA(G9) DC(F11):DG(G8) DG(F12):DC(G7) DA(F13):DT(G6) DT(F14):DA(G5) chain3 chain4 (266) GLN450 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chain6 chain7 (304) LYS364 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence pdavfgdrvrrfqefldtftsyrdsvrsiqvynsnnaanynilphriiislddlrefdrsfwsgilvepayfippaekaltdladsmddvphhpwklsfkgsfgahalsprtltaqhlnklvsvegivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnkltteygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfkslgaggmnqsnligfktlilgntvyplhaarqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattgrgssgvgltaavttdretgerrleagamvladrgvvcidefdkmtdvdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrthrvtipflrkyvqyakervipqltqeainvivknytdlrnddntkkspitartletlirlatahakvrlsktvnkvdakvaanllrfall/lriiwgtnvsiqecttnfrnflmsfkykfrkilderdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransrQrvlkslyktyvdvvhvkvsvrqitdqdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktftkggryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitrdvdtkqlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlylevlpvefltmyisyakehihpiiteaaktelvrayvgmrkattrqlesmirlaeahakmklknvveledvqeavrlirsaikdyatqtgksviqrklqedlsreimnvlkdqasdsmsfnelikqinehsqdrvessdiqealsrlqqedkvivlgegvrrsvrl/vddvtgekvreafeqfledfsvqstdtgevekvyraqiefmkiydlntiyidyqhlsmrengalamaiseqyyrflpflqkglrrvvrkyapervfqisffnlptvhrirdirsekigsllsisgtvtrtsevrpelykasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsrfldwqkvriqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpdvtqlglpgvkpsstgvrdltykisflAchvisigsdeinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsgkassaagltaavvrdeeggdytieagalmladngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkrdeaieppfsaeqlrryikyartfkpiltkearsylvekykelrkddaqgfsrssyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsiirvdv/msaalpsiqlpvdynnlfneitdflvtfkqdkgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcraidnnmplptkeidykddvldvilnqrrlrnermlsdrttelfppnltrryflyfkplsqncarryrisskplsvrqikgdflgqlitvrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflpapytgfKalkaglltetyleaqfvrqhkkltsdveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrvgdgmkirgdinvclmgdpgvaksqllkaickisprgvyttgkgssgvgltaavmkdpvtdemileggalvladngiccidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskremdskfsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyq >5u8t_234567: title=STRUCTURE OF EUKARYOTIC CMG HELICASE AT A REPLICATION FORK AND IMPLICATIONS organism=? DNA sequence DT(F1) DT(F2) DT(F3) DT(F4) DT(F5) DT(F6) DT(F7) DT(F8) DT(F9) DT(F10) DT(F11) DT(F12) DT(F13) DT(F14) chain2 (357) TRP589 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (383) GLN615 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chain3 (378) THR447 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (379) THR448 0 0 0 0 1 3 0 0 0 0 0 0 0 0 chain4 (255) GLN450 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chain5 (366) GLN454 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (367) ARG455 0 0 0 0 0 0 12 4 0 0 0 0 0 0 (372) ARG460 0 0 0 0 5 7 0 0 0 0 0 0 0 0 chain6 (372) ARG614 0 0 0 0 0 0 0 0 0 0 4 4 0 0 chain7 (302) PHE363 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (303) LYS364 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (305) LEU366 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence pnvsrtiarelksflleytdetgrsvygarirtlgemnseslevnyrhlaeskailalflakcpeemlkifdlvameatelhypdyarihseihvrisdfptiyslrelresnlsslvrvtgvvtrrtgvfpqlkyvkfncllgpffqdsneeirvngektvyrnyqrvtlqeapgtvppgrlprhrevilladlvdvskpgeevevtgiyknnydgnlnakngfpvfatiieansikrrvfswteeeerefrkisrdrgiidkiissmapsiyghrdiktavacslfggvpknvngkhsirgdinvlllgdpgtaksqilkyvektahravfatgqgasavgltasvrkdpitkeWtleggalvladkgvclidefdkmndQdrtsiheameqqsisiskagivttlqarcsiiaaanpnggrynstlplaqnvsltepilsrfdilcvvrdlvdeeaderlatfvvdshvrsspipqellmkyihyartkiypklhqmdmdkvsrvyadlrresistgsfpitvrhlesilriaesfakmrlsefvssydldraikvvvdsfvdaqkvsvrrqlrrsfaiy/davfgdrvrrfqefldtftsyrdsvrsiqvynsnnaanyilphriiislddlrefdrsfwsgilvepayfippaekaltdladsmddvphpwklsfkgsfgahalsprtltaqhlnklvsvegivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnkltteygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfkslgaggmnqsnsntligfktlilgntvyplhrqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattgrgssgvgltaavTTdretgerrleagamvladrgvvcidefdkmtdvdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrthrvtipflrkyvqyakervipqltqeainvivknytdlrnddntkkspitartletlirlatahakvrlsktvnkvdakvaanllrfall/lriiwgtnvsiqecttnfrnflmsfkykfyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransrQrvlkslyktyvdvvhvkkvsrqitdqdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktftkggryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitrdvdtkqlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledvlpvefltmyisyakehihpiiteaaktelvrayvgmrkattrqlesmirlaeahakmklknvveledvqeavrlirsaikdyatqtgksviqrklqedlsreimnvlkdqasdsmsfnelikqinehsqdrvessdiqealsrlqqedkvivlgegvrrsvrl/dddnteiiksfknfilefrldsqfiyrdqlrnnilvknysltvnmehligynediykklsdepsdiiplfetaitqvakrisilsrnslptfqlilnsnanqiplrdldsehvskivrlsgiiistsvlssratylsimcrncrhttsitinnftvslprscncgpdpyiiihesskfidqqflklqeipelvpvgemprnltmtcdryltnkvipgtrvtivgiysiynskvairtpyikilgiqsdvetssiwnsvtmfteeeeeeflqlsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllgdpgtaksqllkfvekvspiavytsgkgssaagltasvQRdpmtRefyleggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanpiygryddlkspgdnidfqttilsrfdmifivkddhneerdisianhvinihtgnanamqnqqeengseisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinelesterpitirqleaiiriteslaklelspiaqerhvdeairlfqastmdaas/lnhvkkvddvtgekvreafeqfledfsvqstdtgevekvyraqiefmkiydlntiyidyqhlsmrengalamaiseqyyrflpflqkglrrvvrkyapervfqisffnlptvhrirdirsekigsllsisgtvtrtsevrpelykasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsrfldwqkvriqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpdkpsstlltykisflachvisigsdeinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsgkassaagltaavvRdeeggdytieagalmladngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkrdeaieppfsaeqlrryikyartfkpiltkearsylvekykelrkddaqgfsrssyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsiirvdvdkyvsmmnmivrkiaevdregaeeltavdivdwyllqkendlgslaeyweerrlafkvikrlv/alpsiqlpvdynnlfneitdflvtfkqdgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcraidnnmplptkeidykddvldvilnqrrlrnermlsdrtnelfppnltrryflyfkplsqncarryrkkaisskplsvrqikgdflgqlitvrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflpapytgFKaLkaglltetyleaqfvrqhkksdveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrvgdgmkirgdinvclmgdpgvaksqllkaickisprgvyttgkgssgvgltaavmkdpvtdemileggalvladngiccidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskremdskfsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyq >5u8t_6:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF EUKARYOTIC CMG HELICASE AT A REPLICATION FORK AND IMPLICATIONS organism=? DNA sequence DT(F1) DT(F2) DT(F3) DT(F4) DT(F5) DT(F6) DT(F7) DT(F8) DT(F9) DT(F10) DT(F11) DT(F12) DT(F13) DT(F14) chain6 (372) ARG614 0 0 0 0 0 0 0 0 0 0 4 4 0 0 prot.sequence lnhvkkvddvtgekvreafeqfledfsvqstdtgevekvyraqiefmkiydlntiyidyqhlsmrengalamaiseqyyrflpflqkglrrvvrkyapervfqisffnlptvhrirdirsekigsllsisgtvtrtsevrpelykasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsrfldwqkvriqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpdkpsstlltykisflachvisigsdeinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsgkassaagltaavvRdeeggdytieagalmladngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkrdeaieppfsaeqlrryikyartfkpiltkearsylvekykelrkddaqgfsrssyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsiirvdvdkyvsmmnmivrkiaevdregaeeltavdivdwyllqkendlgslaeyweerrlafkvikrlv >5u91_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF TRE/LOXLTR COMPLEX organism=synthetic construct DNA sequence DG(D101):DC(C136) DC(D102):DG(C135) DC(D103):DG(C134) DA(D104):DT(C133) DT(D105):DA(C132) DG(D106):DC(C131) DT(D107):DA(C130) DT(D108):DA(C129) DG(D109):DC(C128) DG(D110):DC(C127) DC(D111):DG(C126) DA(D112):DT(C125) DT(D113):DA(C124) DA(D114):DT(C123) DT(D115):DA(C122) DA(D116):DT(C121) DG(D117):DC(C120) DG(D118):DC(C119) DG(D119):DC(C118) DT(D120):DA(C117) DG(D121):DC(C116) DT(D122):DA(C115) DA(D123):DT(C114) DA(D124):DT(C113) DT(D125):DA(C112) DA(D126):DT(C111) DG(D127):DC(C110) DG(D128):DC(C109) DA(D129):DT(C108) DT(D130):DA(C107) DG(D131):DC(C106) DT(D132):DA(C105) DT(D133):DA(C104) DG(D134):DC(C103) DT(D135):DA(C102) DC(D136):DG(C101) chainA ( 29) HIS40 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) MET44 0 0 0 0 0 0 0 0 0 0 3 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER47 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) THR87 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) ARG241 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ARG243 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) ARG244 0 4 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) TYR245 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) SER257 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) TYR259 0 0 0 0 0 0 4 6 15 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) GLN262 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (271) ARG282 0 0 0 0 0 0 0 0 0 0 13 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 ( 27) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLU43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 30) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 4 0 0 0 0 0 0 0 0 0 0 ( 33) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 72) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) CYS93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) MET97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (229) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 (230) ARG244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 (243) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (245) TYR259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 9 0 0 0 0 0 0 (248) GLN262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 (268) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 prot.sequence palpadatsdevrknlmdvfrdrpafseHTweMllSvcrswaawcklnnrkwfpaepedvrdyllhlqarglavKTiqQhlcRlnmlhrrsglprpsdsnavslvmrrirkenvdagertkqalafertdfdqvrslmensdrcqdirnlaflgvayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRRYgvaapsatsqlStYalQrifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwttvnsvmnfirnldsetgamvrlled/padatsdevrknlmdvfrdrpafseHTwEMllSvcrswaawcklnnrkwfpaepedvrdyllhlqarglavKTiQQhlCRlnMlhrrsglprpsdsnavslvmrrirkenvdagertkqalafertdfdqvrslmensdrcqdirnlaflgvayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRRygvaapsatsqlStYalQrifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwttvnsvmnfirnldsetgamvrlled >5u91_B:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF TRE/LOXLTR COMPLEX organism=synthetic construct DNA sequence DG(D101):DC(C136) DC(D102):DG(C135) DC(D103):DG(C134) DA(D104):DT(C133) DT(D105):DA(C132) DG(D106):DC(C131) DT(D107):DA(C130) DT(D108):DA(C129) DG(D109):DC(C128) DG(D110):DC(C127) DC(D111):DG(C126) DA(D112):DT(C125) DT(D113):DA(C124) DA(D114):DT(C123) DT(D115):DA(C122) DA(D116):DT(C121) DG(D117):DC(C120) DG(D118):DC(C119) DG(D119):DC(C118) DT(D120):DA(C117) DG(D121):DC(C116) DT(D122):DA(C115) DA(D123):DT(C114) DA(D124):DT(C113) DT(D125):DA(C112) DA(D126):DT(C111) DG(D127):DC(C110) DG(D128):DC(C109) DA(D129):DT(C108) DT(D130):DA(C107) DG(D131):DC(C106) DT(D132):DA(C105) DT(D133):DA(C104) DG(D134):DC(C103) DT(D135):DA(C102) DC(D136):DG(C101) chainB ( 26) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 ( 27) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLU43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 30) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 4 0 0 0 0 0 0 0 0 0 0 ( 33) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 72) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) CYS93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) MET97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (229) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 (230) ARG244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 (243) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (245) TYR259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 9 0 0 0 0 0 0 (248) GLN262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 (268) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 prot.sequence padatsdevrknlmdvfrdrpafseHTwEMllSvcrswaawcklnnrkwfpaepedvrdyllhlqarglavKTiQQhlCRlnMlhrrsglprpsdsnavslvmrrirkenvdagertkqalafertdfdqvrslmensdrcqdirnlaflgvayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRRygvaapsatsqlStYalQrifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwttvnsvmnfirnldsetgamvrlled >5u91_EF:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYSTAL STRUCTURE OF TRE/LOXLTR COMPLEX organism=synthetic construct DNA sequence DG(G101):DC(H136) DA(G102):DT(H135) DC(G103):DG(H134) DA(G104):DT(H133) DA(G105):DT(H132) DC(G106):DG(H131) DA(G107):DT(H130) DT(G108):DA(H129) DC(G109):DG(H128) DC(G110):DG(H127) DT(G111):DA(H126) DA(G112):DT(H125) DT(G113):DA(H124) DT(G114):DA(H123) DA(G115):DT(H122) DC(G116):DG(H121) DA(G117):DT(H120) DC(G118):DG(H119) DC(G119):DG(H118) DC(G120):DG(H117) DT(G121):DA(H116) DA(G122):DT(H115) DT(G123):DA(H114) DA(G124):DT(H113) DT(G125):DA(H112) DG(G126):DC(H111) DC(G127):DG(H110) DC(G128):DG(H109) DA(G129):DT(H108) DA(G130):DT(H107) DC(G131):DG(H106) DA(G132):DT(H105) DT(G133):DA(H104) DG(G134):DC(H103) DG(G135):DC(H102) DC(G136):DG(H101) chainE ( 25) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 ( 26) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 3 0 0 0 0 0 0 0 0 0 0 ( 32) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 71) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 (228) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 (229) ARG244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 (242) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (244) TYR259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 16 6 7 0 0 0 0 0 0 (245) ALA260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (247) GLN262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (248) ARG263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 (267) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 chainF ( 19) HIS40 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU43 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) MET44 0 0 0 0 0 0 0 0 0 0 4 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) SER47 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR87 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLN89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 2 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) CYS93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) ARG241 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG243 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) ARG244 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) TYR245 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) SER257 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) TYR259 0 0 0 0 0 0 2 8 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) GLN262 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) ARG282 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alpaddevrknlmdvfrdrpafseHTweMllSvcrswaawcklnnrkwfpaepedvrdyllhlqarglavKTiqQhlcRlnmlhrrsglprpsdsnavslvmrrirkenvdagertkqalafertdfdqvrslmensdrcqdirnlaflgvayntllriaeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRRygvaapsatsqlStYAlQRifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwttvnsvmnfirnldsetgamvrlled/evrknlmdvfrdrpafseHTwEMllSvcrswaawcklnnrkwfpaepedvrdyllhlqarglavKTiQQhlCRlnmlhrrsglprpsdsnavslvmrrirkenvdagertkqalafertdfdqvrslmensdrcqdirnlaflgvayntllriaeiarirvkdisrtdggrmlihigrtKtlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRRYgvaapsatsqlStYalQrifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwttvnsvmnfirnldsetgamvrlled >5u9h_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA PRODUCT COMPLEX WITH INSERTED SP-ISOMER OF DCTP- ALPHA-S organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 34 ( 26) LYS35 0 0 0 0 3 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5ua1_A:Homeodomain-like; title=MYCOBACTERIUM TUBERCULOSIS KSTR IN COMPLEX WITH A 18-BP DNA OPERATOR organism=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) DNA sequence DA(D1):DT(C18) DT(D2):DA(C17) DT(D3):DA(C16) DA(D4):DT(C15) DG(D5):DC(C14) DA(D6):DT(C13) DA(D7):DT(C12) DC(D8):DG(C11) DA(D9):DT(C10) DC(D10):DG(C9) DG(D11):DC(C8) DT(D12):DA(C7) DT(D13):DA(C6) DC(D14):DG(C5) DT(D15):DA(C4) DA(D16):DT(C3) DG(D17):DC(C2) DT(D18):DA(C1) chainA ( 31) MET39 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 32) ARG40 0 0 0 0 0 0 0 0 0 8 10 6 0 0 0 0 0 0 ( 41) ALA49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 42) VAL50 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 44) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 46) TYR54 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 prot.sequence lgseaqrerrkrildatmaiaskggyeavqMRavadradvAVgTlYryfpskvhllvsalgrefsridakatpfqrlnfmvgklnramqrnpllteamtrayvfadasaasevdqveklidsmfaramaneptedqyhiarvisdvwlsnllawltrrasatdvskrldlavrllig >5ua1_AB:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=MYCOBACTERIUM TUBERCULOSIS KSTR IN COMPLEX WITH A 18-BP DNA OPERATOR organism=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) DNA sequence DA(D1):DT(C18) DT(D2):DA(C17) DT(D3):DA(C16) DA(D4):DT(C15) DG(D5):DC(C14) DA(D6):DT(C13) DA(D7):DT(C12) DC(D8):DG(C11) DA(D9):DT(C10) DC(D10):DG(C9) DG(D11):DC(C8) DT(D12):DA(C7) DT(D13):DA(C6) DC(D14):DG(C5) DT(D15):DA(C4) DA(D16):DT(C3) DG(D17):DC(C2) DT(D18):DA(C1) chainB ( 31) MET39 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG40 0 0 0 0 0 0 8 12 8 0 0 0 0 0 0 0 0 0 ( 41) ALA49 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) VAL50 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR52 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) TYR54 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 chainA ( 31) MET39 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 32) ARG40 0 0 0 0 0 0 0 0 0 8 10 6 0 0 0 0 0 0 ( 41) ALA49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 42) VAL50 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 44) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 46) TYR54 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 prot.sequence lgseaqrerrkrildatmaiaskggyeavqMRavadradvAVgTlYryfpskvhllvsalgrefsridakatpfqrlnfmvgklnramqrnpllteamtrayvfadasaasevdqveklidsmfaramaneptedqyhiarvisdvwlsnllawltrrasatdvskrldlavrllig/lgseaqrerrkrildatmaiaskggyeavqMRavadradvAVgTlYryfpskvhllvsalgrefsridakagatpfqrlnfmvgklnramqrnpllteamtrayvfadasaasevdqveklidsmfaramaeptedqyhiarvisdvwlsnllawltrrasatdvskrldlavrllig >5ua2_A:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=MYCOBACTERIUM TUBERCULOSIS KSTR IN COMPLEX WITH A 26-BP DNA OPERATOR organism=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) DNA sequence DC(M2) DC(M3) DC(M4) DA(M5) DC(M6) DT(M7) DA(M8) DG(M9) DA(M10) DA(M11) DC(M12) DG(M13) DT(M14) DG(M15) DT(M16) DT(M17) DC(M18) DT(M19) DA(M20) DA(M21) DT(M22) DA(M23) DG(M24) DT(M25) chainA ( 31) ARG61 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA70 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR73 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gseaqrerrkrildatmaiaskggyeavqmRavadradvAvgTlyryfpskvhllvsalgrefsridaktdvagatpfqrlnfmvgklnramqrnpllteamtrayvfadasaasevdqveklidsmfaramangeptedqyhiarvisdvwlsnllawltrrasatdvskrldlavrllig >5uan_AB: title=CRYSTAL STRUCTURE OF MULTI-DOMAIN RAR-BETA-RXR-ALPHA HETERODIMER ON DNA organism=HOMO SAPIENS DNA sequence DC(E1):DG(F17) DT(E2):DA(F16) DA(E3):DT(F15) DG(E4):DC(F14) DG(E5):DC(F13) DT(E6):DA(F12) DC(E7):DG(F11) DA(E8):DT(F10) DA(E9):DT(F9) DA(E10):DT(F8) DG(E11):DC(F7) DG(E12):DC(F6) DT(E13):DA(F5) DC(E14):DG(F4) DA(E15):DT(F3) DG(E16):DC(F2) DC(E17):DG(F1) chainA ( 21) GLU153 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 ( 24) LYS156 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 ( 28) LYS160 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 29) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 chainB ( 20) GLU99 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 ( 23) LYS102 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG106 0 0 0 3 10 3 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG107 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 prot.sequence hicaicgdrssgkhygvyscEgcKgffKRtvrkdclidkrqrncqycryqkclamgmkreavqeeranedmpverileaelavepvtnicqaadkqlftlvewakriphfselplddqvillragwnelliasfshrsiavkdgillatglhvhrnsahsagvgaifdrvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmemlea/pcfvcqdkssgyhygvsacEgcKgffRRsiqknmiytchrdkncvinkvtrnrcqycrlqkcfevgmskesvrtaelddltekirkahqetfpslcqlgkyttnssadhrvrldlglwdkfselatkciikivefakrlpgftgltiadqitllkaacldililrictrytpeqdtmtfsdgltlnrtqmhnagfgpltdlvftfanqllplemddtetgllsaiclicgdrqdleeptkvdklqepllealkiyirkrrpskphmfpkilmkitdlrsisakgaervitlkmeipgsmppliqemle >5uan_B:Nuclear_receptor_ligand-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MULTI-DOMAIN RAR-BETA-RXR-ALPHA HETERODIMER ON DNA organism=HOMO SAPIENS DNA sequence DG(F1):DC(E17) DC(F2):DG(E16) DT(F3):DA(E15) DG(F4):DC(E14) DA(F5):DT(E13) DC(F6):DG(E12) DC(F7):DG(E11) DT(F8):DA(E10) DT(F9):DA(E9) DT(F10):DA(E8) DG(F11):DC(E7) DA(F12):DT(E6) DC(F13):DG(E5) DC(F14):DG(E4) DT(F15):DA(E3) DA(F16):DT(E2) DG(F17):DC(E1) chainB ( 20) GLU99 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 ( 23) LYS102 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 ( 27) ARG106 0 0 0 0 0 0 0 0 0 0 0 3 10 3 0 0 0 ( 28) ARG107 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 prot.sequence pcfvcqdkssgyhygvsacEgcKgffRRsiqknmiytchrdkncvinkvtrnrcqycrlqkcfevgmskesvrtaelddltekirkahqetfpslcqlgkyttnssadhrvrldlglwdkfselatkciikivefakrlpgftgltiadqitllkaacldililrictrytpeqdtmtfsdgltlnrtqmhnagfgpltdlvftfanqllplemddtetgllsaiclicgdrqdleeptkvdklqepllealkiyirkrrpskphmfpkilmkitdlrsisakgaervitlkmeipgsmppliqemle >5uc6_A:Cytokine; title=STRUCTURAL INSIGHTS INTO IL-1 ALPHA RECOGNITION BY A NAPHTHYL- MODIFIED APTAMER THAT MIMICS IL-1RI DOMAIN III organism=Homo sapiens DNA sequence DC(B1):DG(B22) DG(B2):DC(B21) DG(B4):DG(B19) DA(B5):DA(B18) DG(B6):DG(B17) DA(B9) DG(B11) DG(B12) DG(B13) DA(B16) chainA ( 56) ASP64 0 0 0 0 0 1 0 0 0 0 ( 59) LYS67 0 0 0 0 0 0 7 0 0 0 ( 60) ILE68 0 0 0 0 0 0 8 0 0 0 (105) TRP113 0 0 0 0 0 0 13 0 0 0 (107) THR115 0 0 0 0 0 0 2 0 0 0 prot.sequence nvkynfmriikyefilndalnqsiirandqyltaaalhnldeavkfdmgayksskDdaKItvilrisktqlyvtaqdedqpvllkempeipktitgsetnllffWeThgtknyftsvahpnlfiatkqdywvclaggppsitdfqilenqa >5ugn_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA IMIDODIPHOSPHATE REACTANT COMPLEX organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 35 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplggvageplpvdsekdifdyiqwkyrepkdrse >5ugo_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA NICK COMPLEX WITH IMIDODIPHOSPHATE organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) DC(P11):DG(T6) chainA (225) LYS234 0 0 0 0 0 0 0 4 0 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 10 6 (267) ASP276 0 0 0 0 0 0 0 0 0 0 7 (270) ASN279 0 0 0 0 0 0 0 0 0 0 9 (271) LYS280 0 0 0 0 0 0 0 0 0 0 16 (274) ARG283 0 0 0 0 0 0 0 0 0 3 12 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5ugp_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA COMPLEX WITH A 1NT GAP AND DCMPPNP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 33 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvageplpvdsekdifdyiqwkyrepkdrse >5uh5_CDF: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX CONTAINING 3 NT OF RNA organism=? DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) chainC (439) GLU466 2 0 0 0 0 0 0 0 0 (440) ARG467 5 0 0 0 0 0 0 0 0 chainD chainF prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqCGlpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/desealrqarkdaeltasadsvraylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatwwirqaitramadqartiripvhmvevinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvtrerirqiesktmsklrhpsrsqvlrdyld >5uh6_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX CONTAINING 2NTRNA IN COMPLEX WITH RIFAMPIN organism=? DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) chainC (439) GLU466 9 0 0 0 0 0 0 0 0 (440) ARG467 4 0 0 0 0 0 0 0 0 prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede >5uh6_CDF: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX CONTAINING 2NTRNA IN COMPLEX WITH RIFAMPIN organism=? DNA sequence DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (439) GLU466 0 0 0 0 0 0 0 0 9 (440) ARG467 0 0 0 0 0 0 0 0 4 chainD chainF prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqCGlpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/desealrqarkdaeltasadsvraylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatwwirqaitramadqartiripvhmvevinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvtrerirqiesktmsklrhpsrsqvlrdyld >5uh8_CDF: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX CONTAINING 4NT RNA organism=? DNA sequence DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (439) GLU466 0 0 0 0 0 0 0 0 7 (440) ARG467 0 0 0 0 0 0 0 0 7 chainD chainF prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqCGlpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/desealrqarkdaeltasadsvraylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatwwirqaitramadqartiripvhmvevinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvtrerirqiesktmsklrhpsrsqvlrdyld >5uh9_CDF: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX CONTAINING 2NT RNA organism=? DNA sequence DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (439) GLU466 0 0 0 0 0 0 0 0 2 (440) ARG467 0 0 0 0 0 0 0 0 5 chainD chainF prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqCGlpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/desealrqarkdaeltasadsvraylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatwwirqaitramadqartiripvhmvevinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvtrerirqiesktmsklrhpsrsqvlrdyld >5uha_CDF: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX organism=? DNA sequence DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (439) GLU466 0 0 0 0 0 0 0 0 19 (440) ARG467 0 0 0 0 0 0 0 0 4 chainD chainF prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqCGlpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/desealrqarkdaeltasadsvraylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatwwirqaitramadqartiripvhmvevinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvtrerirqiesktmsklrhpsrsqvlrdyld >5uhb_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX IN COMPLEX WITH RIFAMPIN organism=? DNA sequence DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (439) GLU466 0 0 0 0 0 0 0 0 3 (440) ARG467 0 0 0 0 0 0 0 0 4 prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede >5uhb_CD: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX IN COMPLEX WITH RIFAMPIN organism=? DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) chainC (439) GLU466 3 0 0 0 0 0 0 0 0 (440) ARG467 4 0 0 0 0 0 0 0 0 chainD prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqCGlpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa >5uhc_CDF: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX CONTAINING 3NT RNA IN COMPLEX WITH RIFAMPIN organism=? DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) chainC (439) GLU466 6 0 0 0 0 0 0 0 0 (440) ARG467 6 0 0 0 0 0 0 0 0 chainD chainF prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqCGlpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/desealrqarkdaeltasadsvraylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatwwirqaitramadqartiripvhmvevinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvtrerirqiesktmsklrhpsrsqvlrdyld >5uhd_CDF: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX CONTAINING 4NT RNA IN COMPLEX WITH RIFAMPIN organism=? DNA sequence DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (439) GLU466 0 0 0 0 0 0 0 0 15 (440) ARG467 0 0 0 0 0 0 0 0 7 chainD chainF prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqCGlpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/desealrqarkdaeltasadsvraylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatwwirqaitramadqartiripvhmvevinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtiegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvtrerirqiesktmsklrhpsrsqvlrdyld >5uhe_CDF: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX IN COMPLEX WITH D-AAP1 organism=? DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) chainC (439) GLU466 4 0 0 0 0 0 0 0 0 (440) ARG467 3 0 0 0 0 0 0 0 0 chainD chainF prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqCGlpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/desealrqarkdaeltasadsvraylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatwwirqaitramadqartiripvhmvevinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvtrerirqiesktmsklrhpsrsqvlrdyld >5uhf_CD: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX IN COMPLEX WITH D-IX336 organism=? DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) chainC (439) GLU466 13 0 0 0 0 0 0 0 0 (440) ARG467 8 0 0 0 0 0 0 0 0 chainD prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqCGlpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa >5uhg_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX IN COMPLEX WITH D-AAP1 AND RIFAMPIN organism=? DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) chainC (439) GLU466 13 0 0 0 0 0 0 0 0 (440) ARG467 3 0 0 0 0 0 0 0 0 prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede >5uhg_CDF: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX IN COMPLEX WITH D-AAP1 AND RIFAMPIN organism=? DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) chainC (439) GLU466 13 0 0 0 0 0 0 0 0 (440) ARG467 3 0 0 0 0 0 0 0 0 chainD chainF prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqCGlpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/desealrqarkdaeltasadsvraylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatwwirqaitramadqartiripvhmvevinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvtrerirqiesktmsklrhpsrsqvlrdyld >5ui5_I:"Winged_helix"_DNA-binding_domain;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS SIGMAN BOUND TO PROMOTER DNA organism=Aquifex aeolicus (strain VF5) / Aquifex aeolicus (strain VF5) DNA sequence DC(B34):DG(A31) DT(B35):DA(A30) DA(B36):DT(A29) DT(B37):DA(A28) DT(B38):DA(A27) DT(B39):DA(A26) DA(B40):DT(A25) DT(B41):DA(A24) DT(B42):DA(A23) DG(B43):DC(A22) DC(B44):DG(A21) DA(B45):DT(A20) DA(B46):DT(A19) DT(B47):DA(A18) DT(B48):DA(A17) DT(B49):DA(A16) DT(B50):DA(A15) DC(B51):DG(A14) DG(B52):DC(A13) DT(B53):DA(A12) DG(B54):DC(A11) DC(B55):DG(A10) DC(B56):DG(A9) DA(B57):DT(A8) DA(B58):DT(A7) DT(B59):DA(A6) DT(B60):DA(A5) DT(B61):DA(A4) DC(B62):DG(A3) DG(B63):DC(A2) chainI (217) ARG295 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) GLU305 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) SER306 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) SER309 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ARG310 0 0 0 0 0 0 0 0 0 0 5 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ARG378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 15 0 0 0 0 0 0 (297) ARG379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 18 25 3 0 0 0 0 0 0 0 (298) THR380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (312) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence eleelqqniklelegkeqelalellnylnekgflsksveeisdvlrcsveelekvrqkvlrleplgvcskdvweflelqieeiypeeeeilkkalrdlkrgkklkpeikgklsrlrlfpsaekvytfakvdaiieeengeffiylyedfididlneeywelyknlqkelkeaferyesirkvldirrrnlrkvlekiverqkdfltgkgslkpltlRevsseigihEStlSRivnskyvktpvgtyslrtffvresaegltqgelmklikeiverkpysdqeianilkekgfkvaRRTvakyremlgipssRerri >5uk7_A:Sm-like_ribonucleoproteins; title=ESCHERICHIA COLI HFQ BOUND TO DSDNA organism=Escherichia coli DNA sequence DC(N1) DG(N2) DG(N3) DC(N4) DA(N5) DA(N6) DA(N7) DA(N8) DA(N9) DA(N10) DC(N11) DG(N12) DG(N13) DC(N14) DA(N15) DA(N16) DA(N17) DA(N18) DA(N19) DA(N20) chainA ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence aKgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps >5ulx_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF HUMAN DNA POLYMERASE IOTA BOUND TO TEMPLATE 1-METHYL- DEOXYADENOSINE CRYSTALLIZED IN THE PRESENCE OF DCTP organism=Homo sapiens DNA sequence DG(T841):DOC(P873) DG(T842):DC(P872) DG(T843):DC(P871) DT(T844):DA(P870) DC(T845):DG(P869) DC(T846):DG(P868) DT(T847):DA(P867) chainA ( 14) TYR39 1 0 0 0 0 0 0 (280) GLU305 4 2 0 0 0 0 0 (331) GLN361 0 0 0 0 0 0 2 prot.sequence ssrvivhvdldcfYaqvemisnpelkdkplgvqQkylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppqsfseEdsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirrysgResrQcpipshviqkdvmtpmvdilmklfrnmvnvltllsvcfcnlk >5um9_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=FLAP ENDONUCLEASE 1 (FEN1) D86N WITH 5'-FLAP SUBSTRATE DNA AND SM3+ organism=Homo sapiens DNA sequence DT(E6):DA(D12) DT(E7):DA(D11) DG(E8):DC(D10) DA(E9):DT(D9) DG(E10):DC(D8) DG(E11):DC(D7) DC(E12):DG(D6) DA(E13):DT(D5) DG(E14):DC(D4) DA(E15):DT(D3) DG(E16):DC(D2) DT(E17):DA(D1) chainA ( 36) MET37 2 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR40 54 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN41 2 0 0 0 0 0 0 0 0 0 0 0 ( 43) ILE44 10 0 0 0 0 0 0 0 0 0 0 0 ( 99) ARG100 0 5 0 0 0 0 0 0 0 0 0 0 (102) ARG103 0 7 2 0 0 0 0 0 0 0 0 0 (128) ARG129 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence giqglakliadvapsairendiksyfgrkvaidasMsiYQflIavrqggdvlqneegettshlmgmfyrtirmmengikpvyvfngkppqlksgelakRseRraeaekqlqqaqaagaeqevekftkRlvkvtkqhndeckhllslmgipyldapseaeascaalvkagkvyaaatedmdcltfgspvlmrhltaseakklpiqefhlsrilqelglnqeqfvdlcillgsdycesirgigpkravdliqkhksieeivrrldpnkypvpenwlhkeahqlflepevldpesvelkwsepneeelikfmcgekqfseerirsgvkrlsksrqgstlevlfq >5und_A:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF CTCF(ZNF 4-10) WITH 28-MER DNA organism=Homo sapiens DNA sequence DT(D4):DA(C25) DG(D5):DC(C24) DC(D6):DG(C23) DC(D7):DG(C22) DC(D8):DG(C21) DA(D9):DT(C20) DC(D10):DG(C19) DA(D11):DT(C18) DG(D12):DC(C17) DA(D13):DT(C16) DG(D14):DC(C15) DG(D15):DC(C14) DC(D16):DG(C13) DC(D17):DG(C12) DA(D18):DT(C11) DG(D19):DC(C10) DC(D20):DG(C9) DA(D21):DT(C8) DG(D22):DC(C7) DG(D23):DC(C6) DG(D24):DC(C5) DG(D25):DC(C4) DG(D26):DC(C3) DC(D27):DG(C2) DG(D28):DC(C1) DC(E1):DG(F28) DG(E2):DC(F27) DC(E3):DG(F26) DC(E4):DG(F25) DC(E5):DG(F24) DC(E6):DG(F23) DC(E7):DG(F22) DT(E8):DA(F21) DG(E9):DC(F20) DC(E10):DG(F19) DT(E11):DA(F18) DG(E12):DC(F17) DG(E13):DC(F16) DC(E14):DG(F15) DC(E15):DG(F14) DT(E16):DA(F13) DC(E17):DG(F12) DT(E18):DA(F11) DG(E19):DC(F10) DT(E20):DA(F9) DG(E21):DC(F8) DG(E22):DC(F7) DG(E23):DC(F6) DC(E24):DG(F5) chainA ( 15) GLU362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) SER364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LYS365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ASP390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) TYR392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) THR421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) SER450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASP451 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ekpfkcsmcdyasvEvsKlkRhirshtgerpfqcslcsyasrdtyKlkRhmrthsgekpyecyicharftQsgTmkmhilqkhtenvakfhcphcdtviarkSDlgVhlrkqhsyieqgkkcrycdavfheryaliqhqkshknekrfkcdqcdyacrqerhmimhkrtht >5und_AB:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF CTCF(ZNF 4-10) WITH 28-MER DNA organism=Homo sapiens DNA sequence DG(F5):DC(E24) DC(F6):DG(E23) DC(F7):DG(E22) DC(F8):DG(E21) DA(F9):DT(E20) DC(F10):DG(E19) DA(F11):DT(E18) DG(F12):DC(E17) DA(F13):DT(E16) DG(F14):DC(E15) DG(F15):DC(E14) DC(F16):DG(E13) DC(F17):DG(E12) DA(F18):DT(E11) DG(F19):DC(E10) DC(F20):DG(E9) DA(F21):DT(E8) DG(F22):DC(E7) DG(F23):DC(E6) DG(F24):DC(E5) DG(F25):DC(E4) DG(F26):DC(E3) DC(F27):DG(E2) DG(F28):DC(E1) DC(C1):DG(D28) DG(C2):DC(D27) DC(C3):DG(D26) DC(C4):DG(D25) DC(C5):DG(D24) DC(C6):DG(D23) DC(C7):DG(D22) DT(C8):DA(D21) DG(C9):DC(D20) DC(C10):DG(D19) DT(C11):DA(D18) DG(C12):DC(D17) DG(C13):DC(D16) DC(C14):DG(D15) DC(C15):DG(D14) DT(C16):DA(D13) DC(C17):DG(D12) DT(C18):DA(D11) DG(C19):DC(D10) DT(C20):DA(D9) DG(C21):DC(D8) DG(C22):DC(D7) DG(C23):DC(D6) DC(C24):DG(D5) DA(C25):DT(D4) chainA ( 15) GLU362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) SER364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LYS365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ASP390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) TYR392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) THR421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) SER450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASP451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 15) GLU362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) SER364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LYS365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ASP390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) TYR392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) THR421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) LYS449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) SER450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASP451 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ARG457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ekpfkcsmcdyasvEvSKlkRhirshtgerpfqcslcsyasrDTYKlkRhmrthsgekpyecyicharftQsgTmkmhilqkhtenvakfhcphcdtviaRkSDlgVhlrkqhsyieqgkkcrycdavfheryaliqhqkshknekrfkcdqcdyacrqerhmimhkrtht/ekpfkcsmcdyasvEvSKlkRhirshtgerpfqcslcsyasrDtYKlkRhmrthsgekpyecyicharftQsgTmkmhilqkhtenvakfhcphcdtviaRKSDlgVhlRkqhsyieqgkkcrycdavfheryaliqhqkshkne >5uop_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS INTASOME WITH A 2- PYRIDINONE AMINAL INHIBITOR (COMPOUND 18) organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (105) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (107) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (208) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (214) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (215) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 6 12 9 3 (252) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >5uoq_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS INTASOME WITH A 2- PYRIDINONE AMINAL INHIBITOR (COMPOUND 31) organism=HUMAN SPUMARETROVIRUS DNA sequence DG(C4):DC(D16) DT(C5):DA(D15) DC(C6):DG(D14) DA(C7):DT(D13) DT(C8):DA(D12) DG(C9):DC(D11) DG(C10):DC(D10) DA(C11):DT(D9) DA(C12):DT(D8) DT(C13):DA(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DG(C17):DC(D3) DC(C18):DG(D2) DA(C19):DT(D1) chainA (105) ILE112 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG114 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN215 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU221 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ARG222 3 9 11 6 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO259 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ldaeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >5uuf_A:ARM_repeat; title=BACILLUS CEREUS DNA GLYCOSYLASE ALKD BOUND TO A YATAKEMYCIN-ADENINE NUCLEOBASE ADDUCT AND DNA CONTAINING AN ABASIC SITE (12-MER PRODUCT COMPLEX) organism=Bacillus cereus DNA sequence DC(C1):DG(B12) DG(C2):DC(B11) DG(C3):DC(B10) DG(C4):DC(B9) DC(C5):DG(B8) DT(C6):DA(B7) DT(C7):DA(B5) DT(C8):DC(B4) DG(C9):DC(B3) DG(C10):DC(B2) DG(C11):DC(B1) chainA ( 27) TYR27 0 0 0 0 0 7 0 0 0 0 0 (183) LYS183 0 0 0 0 0 2 0 0 0 0 0 (215) ARG215 0 2 4 0 0 0 0 0 0 0 0 prot.sequence mhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskReaikhikqnyg >5uug_A:ARM_repeat; title=BACILLUS CEREUS DNA GLYCOSYLASE ALKD BOUND TO A YATAKEMYCIN-ADENINE NUCLEOBASE ADDUCT AND DNA CONTAINING AN ABASIC SITE (9-MER PRODUCT COMPLEX) organism=Bacillus cereus DNA sequence DG(B2):DC(C9) DG(B3):DC(C8) DC(B4):DG(C7) DA(B5):DT(C6) DA(B7):DT(C5) DG(B8):DT(C4) DC(B9):DC(C3) chainA ( 29) TYR27 0 0 0 0 7 0 0 (185) LYS183 0 0 0 0 2 0 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskreaikhikqny >5uuh_A:ARM_repeat; title=BACILLUS CEREUS DNA GLYCOSYLASE ALKD BOUND TO A YATAKEMYCIN-ADENINE NUCLEOBASE ADDUCT AND DNA CONTAINING A FLUORINATED ABASIC SITE (9- MER PRODUCT COMPLEX) organism=Bacillus cereus DNA sequence DG(B2):DC(C9) DG(B3):DC(C8) DC(B4):DG(C7) DA(B5):DT(C6) DA(B7):DT(C5) DG(B8):DT(C4) DC(B9):DC(C3) chainA ( 27) TYR27 0 0 0 0 8 0 0 (183) LYS183 0 0 0 0 2 0 0 prot.sequence mhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqKaigwvlreyaktnpdvvweyvqnnelaplskreaikhikqny >5ux0_A:Ribonuclease_H-like; title=X-RAY CRYSTAL STRUCTURE OF MARINITOGA PIEZOPHILA ARGONAUTE IN COMPLEX WITH 5' OH GUIDE RNA AND TARGET DNA organism=Marinitoga piezophila DNA sequence DA(C2) DT(C3) DG(C4) DA(C5) DG(C6) DG(C7) DT(C8) DA(C9) DG(C10) DT(C11) DA(C12) DG(C13) DG(C14) DT(C15) DT(C16) DG(C17) DT(C18) DA(C19) DC(C20) DC(C21) chainA (106) LYS105 0 0 0 0 0 0 0 1 10 2 0 0 0 0 0 0 0 0 0 0 (210) THR210 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (406) LYS408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (408) PHE410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 7 (566) PHE573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (567) LEU574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 (604) TYR611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (605) THR612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence naylnlykidipkkikrlyfynpdmepklfarnlsrvnnfkfqdsndlvwieipdidfqitpknvfqykvekeeiikeeedkklfvktlykyikklfldndfyfkKgnnfisnsevfsldsnenvnahltykikihnisneyylsilpkftflskepalesaiksgylyniksgksfpyisgldgilkidinnqivevaypenylfnftTrdaekygfskevheiyknkvfegfkkipktlgflnkitnlnenyqlkdgykifinviykfkngesryakdvfkysfykneqplkaifffsskkqffevqkslkelfhnkhsvfyraaaelgfskveflrdsktkssaflynpeeftvkntefinqiednvmaivlldkyignidplvrnfpdnlilqpilkekliKpFiiksyvykmgnfipeckpfilkkmedkeknlyigidlshdrktnlciaavdntgdilyigkhknleekmnldilekeyikafekyiekfnvspenvfilragrfiedieiiknfisyndtkytlvevnkntninsyddlkewiikldentyiyypktFLnqkgvevkilenntdytieeiieqiylltrvahstpYTnyklpyplhiankvaltdyewklyipy >5uzv_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' RECESSED-END DNA (RI) organism=Homo sapiens DNA sequence DT(B1):DA(A10) DC(B2):DG(A9) DG(B3):DC(A8) DA(B4):DT(A7) DC(B5):DG(A6) DT(B6):DA(A5) DA(B7):DT(A4) DG(B8):DC(A3) DC(B9):DG(A2) DG(B10):DC(A1) chainZ (120) ARG121 19 0 0 0 0 0 0 0 0 0 prot.sequence giqgllqfikeasepihvrkykgqvvavdtycwlhkgaiacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearecftRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtnlyf >5v04_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' RECESSED-END DNA (RII) organism=Homo sapiens DNA sequence DT(B1):DA(A10) DC(B2):DG(A9) DG(B3):DC(A8) DA(B4):DT(A7) DC(B5):DG(A6) DT(B6):DA(A5) DA(B7):DT(A4) DG(B8):DC(A3) DC(B9):DG(A2) DG(B10):DC(A1) chainZ ( 3) GLN4 0 0 0 0 1 1 0 0 0 0 ( 35) HIS36 18 0 0 0 0 0 0 0 0 0 ( 39) ILE40 6 0 0 0 0 0 0 0 0 0 (116) GLU117 2 6 0 0 0 0 0 0 0 0 (119) THR120 5 0 0 0 0 0 0 0 0 0 (120) ARG121 11 11 7 0 0 0 0 0 0 0 prot.sequence giQgllqfikeasepihvrkykgqvvavdtycwlHkgaIacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearEcfTRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtalyf >5v05_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' RECESSED-END DNA (RIII) organism=Homo sapiens DNA sequence DT(B1):DA(A10) DC(B2):DG(A9) DG(B3):DC(A8) DA(B4):DT(A7) DC(B5):DG(A6) DT(B6):DA(A5) DA(B7):DT(A4) DG(B8):DC(A3) DC(B9):DG(A2) DG(B10):DC(A1) chainZ ( 35) HIS36 22 0 0 0 0 0 0 0 0 0 ( 39) ILE40 7 0 0 0 0 0 0 0 0 0 (116) GLU117 1 2 0 0 0 0 0 0 0 0 (119) THR120 3 0 0 0 0 0 0 0 0 0 (120) ARG121 6 9 9 0 0 0 0 0 0 0 prot.sequence giqgllqfikeasepihvrkykgqvvavdtycwlHkgaIacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearEcfTRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtal >5v06_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' RECESSED-END DNA (RIV) organism=Homo sapiens DNA sequence DT(B1):DA(A10) DC(B2):DG(A9) DG(B3):DC(A8) DA(B4):DT(A7) DC(B5):DG(A6) DT(B6):DA(A5) DA(B7):DT(A4) DG(B8):DC(A3) DC(B9):DG(A2) DG(B10):DC(A1) chainZ ( 3) GLN4 0 0 0 0 0 1 0 0 0 0 ( 32) CYS33 2 0 0 0 0 0 0 0 0 0 ( 35) HIS36 40 0 0 0 0 0 0 0 0 0 ( 36) LYS37 3 0 0 0 0 0 0 0 0 0 ( 39) ILE40 7 0 0 0 0 0 0 0 0 0 ( 91) ARG92 1 0 0 0 0 0 0 0 0 0 (120) ARG121 0 10 13 0 0 0 0 0 0 0 prot.sequence giQgllqfikeasepihvrkykgqvvavdtyCwlHKgaIacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversRrerrqanllkgkqllregkvsearecftRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtalyf >5v07_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (D173A) IN COMPLEX WITH 5' RECESSED-END DNA (RV) organism=Homo sapiens DNA sequence DT(B1):DA(A10) DC(B2):DG(A9) DG(B3):DC(A8) DA(B4):DT(A7) DC(B5):DG(A6) DT(B6):DA(A5) DA(B7):DT(A4) DG(B8):DC(A3) DC(B9):DG(A2) DG(B10):DC(A1) chainZ ( 32) CYS33 1 0 0 0 0 0 0 0 0 0 ( 35) HIS36 43 0 0 0 0 0 0 0 0 0 ( 36) LYS37 3 0 0 0 0 0 0 0 0 0 ( 39) ILE40 7 0 0 0 0 0 0 0 0 0 ( 91) ARG92 6 1 0 0 0 0 0 0 0 0 (120) ARG121 0 10 14 0 0 0 0 0 0 0 prot.sequence giqgllqfikeasepihvrkykgqvvavdtyCwlHKgaIacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversRrerrqanllkgkqllregkvsearecftRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsallafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdt >5v08_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (D173A) IN COMPLEX WITH 5' RECESSED-END DNA (RVI) organism=Homo sapiens DNA sequence DT(B1):DA(A10) DC(B2):DG(A9) DG(B3):DC(A8) DA(B4):DT(A7) DC(B5):DG(A6) DT(B6):DA(A5) DA(B7):DT(A4) DG(B8):DC(A3) DC(B9):DG(A2) DG(B10):DC(A1) chainZ ( 2) GLN4 0 0 0 0 0 1 0 0 0 0 ( 34) HIS36 40 0 0 0 0 0 0 0 0 0 ( 35) LYS37 1 0 0 0 0 0 0 0 0 0 ( 38) ILE40 6 0 0 0 0 0 0 0 0 0 ( 90) ARG92 6 4 0 0 0 0 0 0 0 0 (119) ARG121 0 5 10 0 0 0 0 0 0 0 prot.sequence iQgllqfikeasepihvrkykgqvvavdtycwlHKgaIacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversRrerrqanllkgkqllregkvsearecftRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsallafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdt >5v09_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (D225A) IN COMPLEX WITH 5' RECESSED-END DNA (RVII) organism=Homo sapiens DNA sequence DA(B1):DT(A10) DC(B2):DG(A9) DG(B3):DC(A8) DA(B4):DT(A7) DC(B5):DG(A6) DT(B6):DA(A5) DA(B7):DT(A4) DG(B8):DC(A3) DC(B9):DG(A2) DG(B10):DC(A1) chainZ ( 3) GLN4 0 0 0 1 8 7 0 0 0 0 ( 35) HIS36 35 0 0 0 0 0 0 0 0 0 ( 36) LYS37 2 0 0 0 0 0 0 0 0 0 ( 39) ILE40 7 0 0 0 0 0 0 0 0 0 ( 91) ARG92 1 4 0 0 0 0 0 0 0 0 ( 94) ARG95 0 2 2 0 0 0 0 0 0 0 (119) THR120 1 0 0 0 0 0 0 0 0 0 prot.sequence giQgllqfikeasepihvrkykgqvvavdtycwlHKgaIacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversRreRrqanllkgkqllregkvsearecfTrsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcaylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtlyf >5v0a_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (D225A) IN COMPLEX WITH 5' RECESSED-END DNA (RVIII) organism=Homo sapiens DNA sequence DC(A1):DG(B9) DG(A2):DC(B8) DC(A3):DG(B7) DT(A4):DA(B6) DA(A5):DT(B5) DG(A6):DC(B4) DT(A7):DA(B3) DC(A8):DG(B2) DG(A9):DC(B1) DT(A10):DA(B102) chainZ ( 35) HIS36 0 0 0 0 0 0 0 0 0 40 ( 36) LYS37 0 0 0 0 0 0 0 0 0 1 ( 39) ILE40 0 0 0 0 0 0 0 0 0 8 ( 91) ARG92 0 0 0 0 0 0 0 0 4 4 ( 94) ARG95 0 0 0 0 0 0 0 10 8 0 ( 95) ARG96 0 0 0 0 0 0 0 0 0 1 (119) THR120 0 0 0 0 0 0 0 0 0 1 (120) ARG121 0 0 0 0 0 0 0 2 1 1 prot.sequence giqgllqfikeasepihvrkykgqvvavdtycwlHKgaIacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversRreRRqanllkgkqllregkvsearecfTRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcaylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtly >5v0b_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' RECESSED-END DNA (RIX) organism=Homo sapiens DNA sequence DC(B1):DG(A9) DG(B2):DC(A8) DA(B3):DT(A7) DC(B4):DG(A6) DT(B5):DA(A5) DA(B6):DT(A4) DG(B7):DC(A3) DC(B8):DG(A2) DG(B9):DC(A1) chainZ (120) ARG121 10 10 0 0 0 0 0 0 0 prot.sequence giqgllqfikeasepihvrkykgqvvavdtycwlhkgaiacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearecftRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdt >5v0d_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' FLAP DNA (F2II) organism=Homo sapiens DNA sequence DA(E2):DT(A10) DG(B1):DC(A9) DT(B2):DA(A8) DA(B3):DT(A7) DC(B4):DG(A6) DT(B5):DA(A5) DA(B6):DT(A4) DG(B7):DC(A3) DC(B8):DG(A2) DG(B9):DC(A1) chainZ ( 3) GLN4 0 0 0 0 0 4 1 0 0 0 ( 35) HIS36 43 0 0 0 0 0 0 0 0 0 ( 36) LYS37 1 0 0 0 0 0 0 0 0 0 ( 39) ILE40 7 0 0 0 0 0 0 0 0 0 ( 91) ARG92 1 1 0 0 0 0 0 0 0 0 ( 95) ARG96 2 0 0 0 0 0 0 0 0 0 (119) THR120 1 0 0 0 0 0 0 0 0 0 (120) ARG121 0 7 3 0 0 0 0 0 0 0 prot.sequence giQgllqfikeasepihvrkykgqvvavdtycwlHKgaIacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversRrerRqanllkgkqllregkvsearecfTRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtalyf >5v0e_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' FLAP DNA (F5I) organism=Homo sapiens DNA sequence DC(A1):DG(B13) DG(A2):DC(B12) DC(A3):DG(B11) DT(A4):DA(B10) DA(A5):DT(B9) DG(A6):DC(B8) DT(A7):DA(B7) DG(A8):DC(B6) DA(A9):DT(B5) DT(A10):DG(B4) chainZ (116) GLU117 0 0 0 0 0 0 0 0 0 18 (120) ARG121 0 0 0 0 0 0 0 0 0 4 prot.sequence giqgllqfikeasepihvrkykgqvvavdtycwlhkgaiacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearEcftRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtalyf >5v0l_A:HLH,_helix-loop-helix_DNA-binding_domain;PYP-like_sensor_domain_PAS_domain; title=CRYSTAL STRUCTURE OF THE AHR-ARNT HETERODIMER IN COMPLEX WITH THE DRE organism=HOMO SAPIENS DNA sequence DG(D5):DC(C18) DT(D6):DA(C17) DT(D7):DA(C16) DC(D8):DG(C15) DT(D9):DA(C14) DC(D10):DG(C13) DA(D11):DT(C12) DG(D13):DC(C10) DC(D14):DG(C9) DA(D15):DT(C8) DA(D16):DT(C7) chainA ( 14) HIS94 0 0 0 0 0 4 2 0 0 0 0 ( 18) GLU98 0 0 0 0 0 0 2 0 0 0 0 ( 21) ARG101 0 0 0 0 4 0 0 0 0 0 0 ( 22) ARG102 0 0 0 0 0 0 0 0 8 2 0 prot.sequence qssadkerlarenHseiErrRRnkmtayitelsdmvptcsalarkpdkltilrmavshmkslkpsfltdqelkhlileaadgflfivscetgrvvyvsdsvtpqpqsewfgstlydqvhpddvdklreqlsgsrrsficrmrcephfvvvhctgydddpeagqgskfclvaigrlq >5v0l_AB:HLH,_helix-loop-helix_DNA-binding_domain;PYP-like_sensor_domain_PAS_domain; title=CRYSTAL STRUCTURE OF THE AHR-ARNT HETERODIMER IN COMPLEX WITH THE DRE organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DG(D5):DC(C18) DT(D6):DA(C17) DT(D7):DA(C16) DC(D8):DG(C15) DT(D9):DA(C14) DC(D10):DG(C13) DA(D11):DT(C12) DG(D13):DC(C10) DC(D14):DG(C9) DA(D15):DT(C8) DA(D16):DT(C7) chainA ( 14) HIS94 0 0 0 0 0 4 2 0 0 0 0 ( 18) GLU98 0 0 0 0 0 0 2 0 0 0 0 ( 21) ARG101 0 0 0 0 4 0 0 0 0 0 0 ( 22) ARG102 0 0 0 0 0 0 0 0 8 2 0 chainB ( 3) ARG39 0 0 0 0 0 0 0 9 10 0 0 prot.sequence qssadkerlarenHseiErrRRnkmtayitelsdmvptcsalarkpdkltilrmavshmkslkpsfltdqelkhlileaadgflfivscetgrvvyvsdsvtpqpqsewfgstlydqvhpddvdklreqlsgsrrsficrmrcephfvvvhctgydddpeagqgskfclvaigrlq/rhRdrlnteldrlasllpfpqdvinkldklsvlrlsvsylraksffdvalkstqegefllqalvlvvtadalvfyasstiqdylgfqqsdvihqsvyelihtedraefqrqlhwaldqlppenasfmercfrcdnssgflamnfqgrlkylhlppqlalfaiatpl >5v0l_B:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE AHR-ARNT HETERODIMER IN COMPLEX WITH THE DRE organism=MUS MUSCULUS DNA sequence DG(D5):DC(C18) DT(D6):DA(C17) DT(D7):DA(C16) DC(D8):DG(C15) DT(D9):DA(C14) DC(D10):DG(C13) DA(D11):DT(C12) DG(D13):DC(C10) DC(D14):DG(C9) DA(D15):DT(C8) DA(D16):DT(C7) chainB ( 3) ARG39 0 0 0 0 0 0 0 9 10 0 0 prot.sequence rhRdrlnteldrlasllpfpqdvinkldklsvlrlsvsylraksffdvalkstqegefllqalvlvvtadalvfyasstiqdylgfqqsdvihqsvyelihtedraefqrqlhwaldqlppenasfmercfrcdnssgflamnfqgrlkylhlppqlalfaiatpl >5v0q_A:Homing_endonucleases; title=ORIGINAL ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE TARGETING THE HIV INTEGRASE GENE; HARBORS 49 POINT MUTATIONS RELATIVE TO WILD-TYPE I- ONUI organism=SYNTHETIC CONSTRUCT DNA sequence DG(B0):DC(C26) DG(B1):DC(C25) DA(B2):DT(C24) DA(B3):DT(C23) DT(B4):DA(C22) DG(B5):DC(C21) DG(B6):DC(C20) DC(B7):DG(C19) DA(B8):DT(C18) DG(B9):DC(C17) DT(B10):DA(C16) DA(B11):DT(C15) DT(B12):DA(C14) DT(B13):DA(C13) DC(B14):DG(C12) DA(B15):DT(C11) DT(B16):DA(C10) DC(B17):DG(C9) DC(B18):DG(C8) DA(B19):DT(C7) DC(B20):DG(C6) DA(B21):DT(C5) DA(B22):DT(C4) DT(B23):DA(C3) DG(B24):DC(C2) chainA ( 18) SER24 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) TYR28 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) TYR30 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG32 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 19 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG44 0 0 0 0 0 2 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR46 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR48 0 0 0 0 0 0 0 0 0 5 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ILE68 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) THR70 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ASN72 0 0 0 0 0 0 0 0 14 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ALA76 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) SER78 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) HIS80 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) HIS180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 (174) GLU184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 (176) ILE186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 3 0 0 (180) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 (185) HIS195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 (187) ARG197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 9 0 0 0 (189) ARG199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 1 0 0 0 0 (191) GLU201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 1 0 0 0 0 0 0 (193) ALA203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (215) TYR225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 (217) GLN227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 (219) TYR229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 (222) ARG232 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (224) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 2 19 6 1 0 0 0 0 0 0 0 0 (226) ARG236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 14 0 0 0 0 0 0 (230) SER240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence resinpwiltgfadaegSfglYiYnRnryttRlRfTiTlhnkdksileniqstwkvgIiTnNgdnAvSlHvsrfedlkviidhfekyplitqklgdyklfkqafsvmenkehlkengikelvrikakmnwgltdelkkafpgnisrerplinknipnfkwlagftsgegHfgvElIknsRnsrvHvRlRfEiAqhvrdknlmnslitylgcgyiYeQnYseRsWlRfsvSkfsdindkiipvfqentligvkledfedwckvaklieekkhltesgldeikkiklnmnkgr >5v1f_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH 8-OXOG AT THE PRIMER TERMINUS AND INCOMING DCTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 39 ( 26) LYS35 0 0 0 0 8 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplvageplpvdsekdifdyiqwkyrepkdrse >5v1g_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA BINARY COMPLEX WITH 8-OXOG AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 35 0 0 0 0 ( 26) LYS35 9 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpskekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5v1h_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA BINARY COMPLEX WITH 8-OXOG:A AT THE PRIMER TERMINUS organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 24) HIS34 38 0 0 0 0 ( 25) LYS35 8 0 0 0 0 ( 28) ALA38 4 0 0 0 0 prot.sequence lnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5v1i_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA TERNARY PRODUCT COMPLEX WITH 8-OXOG:C AND INSERTED DCTP organism=Homo sapiens DNA sequence DG(T6):DC(P11) DC(T7):8OG(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 0 1 6 0 0 0 0 0 0 0 (262) TYR271 8 12 0 0 0 0 0 0 0 0 0 (267) ASP276 7 0 0 0 0 0 0 0 0 0 0 (270) ASN279 9 0 0 0 0 0 0 0 0 0 0 (271) LYS280 8 0 0 0 0 0 0 0 0 0 0 (274) ARG283 12 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5v1j_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA OPEN PRODUCT COMPLEX WITH 8-OXOG:C AND INSERTED DCTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 22) HIS34 0 0 0 0 42 ( 23) LYS35 0 0 0 0 9 ( 26) ALA38 0 0 0 0 3 prot.sequence ggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5v1n_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH 8-OXOG:A AT THE PRIMER TERMINUS AND INCOMING DCTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 22) HIS34 33 0 0 0 0 ( 23) LYS35 4 0 0 0 0 ( 26) ALA38 4 0 0 0 0 prot.sequence nggidmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeaklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirpltgvageplpvdsekdifdyiqwkyrepkdrse >5v1o_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA PRODUCT COMPLEX WITH 8-OXOG:A AND INSERTED DCTP organism=Homo sapiens DNA sequence DG(T6):DC(P11) DA(T7):8OG(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 0 2 6 0 0 0 0 0 0 0 (262) TYR271 7 5 0 0 0 0 0 0 0 0 0 (267) ASP276 10 0 0 0 0 0 0 0 0 0 0 (270) ASN279 9 0 0 0 0 0 0 0 0 0 0 (271) LYS280 19 0 0 0 0 0 0 0 0 0 0 (274) ARG283 14 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5v1p_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH 8-OXOG:C AT THE PRIMER TERMINUS AND INCOMING DCTP ANALOG organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 33 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5v1r_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA REACTANT COMPLEX WITH 8-OXOG:C AT THE PRIMER TERMINUS AND INCOMING DCTP organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5v3g_A:beta-beta-alpha_zinc_fingers; title=PRDM9-ALLELE-C ZNF8-13 organism=Homo sapiens DNA sequence DG(C2):DC(B21) DG(C3):DC(B20) DG(C4):DC(B19) DC(C5):DG(B18) DA(C6):DT(B17) DA(C7):DT(B16) DC(C8):DG(B15) DG(C9):DC(B14) DC(C10):DG(B13) DT(C11):DA(B12) DC(C12):DG(B11) DA(C13):DT(B10) DC(C14):DG(B9) DT(C15):DA(B8) DG(C16):DC(B7) DG(C17):DC(B6) DG(C18):DC(B5) DG(C19):DC(B4) DT(C20):DA(B3) DC(C21):DG(B2) chainA ( 18) SER732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 19) HIS733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 ( 22) ARG736 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 4 0 0 ( 43) ARG757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 14 2 0 0 0 ( 44) ASP758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 ( 46) SER760 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 47) HIS761 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 1 0 0 0 0 ( 72) ASP786 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 74) SER788 0 0 0 0 0 0 0 0 0 0 0 0 2 7 2 0 0 0 0 0 ( 75) ASN789 0 0 0 0 0 0 0 0 0 0 8 10 3 0 0 0 0 0 0 0 (100) TRP814 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 (102) SER816 0 0 0 0 0 0 0 0 2 1 2 0 0 0 0 0 0 0 0 0 (103) VAL817 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 (106) ARG820 0 0 0 0 0 0 25 11 0 0 0 0 0 0 0 0 0 0 0 0 (128) ASP842 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) SER844 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ASN845 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) SER872 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) HIS873 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) ARG876 19 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sekpyvcrecgrgfsNkSHllRhqrthtgekpyvcrecgrgfRDkSHllshqrthtgekpyvcrecgrgfrDkSNllshqrthtgekpyvcrecgrgfsWqSVllRhqrthtgekpyvcrecgrgfrDkSNllshqrthtgekpyvcrecgrgfrnkSHllRhqrtht >5v3j_F:beta-beta-alpha_zinc_fingers; title=MOUSEZFP568-ZNF1-10 IN COMPLEX WITH DNA organism=Mus musculus DNA sequence DG(D1):DC(C26) DC(D2):DG(C25) DC(D3):DG(C24) DC(D4):DG(C23) DT(D5):DA(C22) DT(D6):DA(C21) DT(D7):DA(C20) DT(D8):DA(C19) DT(D9):DA(C18) DA(D10):DT(C17) DC(D11):DG(C16) DC(D12):DG(C15) DT(D13):DA(C14) DG(D14):DC(C13) DT(D15):DA(C12) DG(D16):DC(C11) DC(D17):DG(C10) DC(D18):DG(C9) DA(D19):DT(C8) DC(D20):DG(C7) DG(D21):DC(C6) DC(D22):DG(C5) DC(D23):DG(C4) DC(D24):DG(C3) DA(D25):DT(C2) DC(D26):DG(C1) chainF ( 69) ARG430 7 11 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) SER432 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) HIS433 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG436 0 0 0 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) TYR458 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) ASP459 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) THR460 0 0 0 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) CYS486 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) SER488 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) GLN489 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LEU492 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) ILE513 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER514 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) SER516 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) HIS517 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) ARG520 0 0 0 0 0 0 0 0 0 2 12 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG542 0 0 0 0 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) GLU545 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 (187) ARG548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (210) THR571 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) THR572 0 0 0 0 0 0 0 0 0 0 0 0 6 10 2 0 0 0 0 0 0 0 0 0 0 0 (212) GLU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (215) ARG576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 8 5 0 0 0 0 0 0 0 0 (237) ARG598 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 20 0 0 0 0 0 0 0 (240) GLU601 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (265) ARG626 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 7 0 0 0 0 0 (267) SER628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 (268) GLU629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 (271) ARG632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 11 0 0 0 prot.sequence phkckecgkafhtpsqlshhqklhvgekpykcqecgkafpsnaqlslhhrvhtdekcfeckecgkafmRpSHllRhqrihtgekphkckecgkafryDTqlslhllthagarrfeckdcdkvyscasqlaLhqmshtgekphkckecgkgfiSdSHllRhqsvhtgetpykckecgkgfrRgsElarhqrahsgdkpykckecgksftCtTElfRhqkvhtgdrphkckecgkafiRrselthhershsgekpyeckecgktfgRgSElsRhqkihtg >5v3m_C:beta-beta-alpha_zinc_fingers; title=MOUSEZFP568-ZNF1-11 IN COMPLEX WITH DNA organism=Mus musculus DNA sequence DT(B1):DA(A28) DG(B2):DC(A27) DC(B3):DG(A26) DC(B4):DG(A25) DC(B5):DG(A24) DT(B6):DA(A23) DT(B7):DA(A22) DT(B8):DA(A21) DT(B9):DA(A20) DT(B10):DA(A19) DA(B11):DT(A18) DC(B12):DG(A17) DC(B13):DG(A16) DT(B14):DA(A15) DG(B15):DC(A14) DT(B16):DA(A13) DG(B17):DC(A12) DC(B18):DG(A11) DC(B19):DG(A10) DA(B20):DT(A9) DC(B21):DG(A8) DG(B22):DC(A7) DC(B23):DG(A6) DC(B24):DG(A5) DC(B25):DG(A4) DA(B26):DT(A3) DC(B27):DG(A2) DA(B28):DT(A1) chainC ( 69) ARG430 3 10 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) SER432 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) HIS433 0 0 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG436 0 0 0 3 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) TYR458 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) ASP459 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) THR460 0 0 0 0 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) CYS486 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) SER488 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LEU492 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) ILE513 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER514 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) SER516 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) HIS517 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) ARG520 0 0 0 0 0 0 0 0 0 0 2 9 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) GLU545 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (210) THR571 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) THR572 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 2 0 0 0 0 0 0 0 0 0 0 0 0 (212) GLU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (215) ARG576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 10 3 0 0 0 0 0 0 0 0 0 (237) ARG598 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 16 0 0 0 0 0 0 0 0 (240) GLU601 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (265) ARG626 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 6 0 0 0 0 0 0 (267) SER628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 (268) GLU629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 (271) ARG632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 13 0 0 0 0 prot.sequence phkckecgkafhtpsqlshhqklhvgekpykcqecgkafpsnaqlslhhrvhtdekcfeckecgkafmRpSHllRhqrihtgekphkckecgkafrYDTqlslhllthagarrfeckdcdkvysCaSQlaLhqmshtgekphkckecgkgfISdSHllRhqsvhtgetpykckecgkgfrRgsElaRhqrahsgdkpykckecgksftCTTElfRhqkvhtgdrphkckecgkafiRrsElthhershsgekpyeckecgktfgRgSElsRhqkiht >5v8f_E:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURAL BASIS OF MCM2-7 REPLICATIVE HELICASE LOADING BY ORC-CDC6 AND CDT1 organism=? DNA sequence DA(N45):DT(M45) DA(N46):DT(M44) DA(N47):DT(M43) DA(N48):DT(M42) DG(N49):DC(M41) DG(N50):DC(M40) DC(N51):DG(M39) DC(N52):DG(M38) DT(N53):DA(M37) DG(N54):DC(M36) DC(N55):DG(M35) DA(N56):DT(M34) DG(N57):DC(M33) DG(N58):DC(M32) DC(N59):DG(M31) DA(N60):DT(M30) DA(N61):DT(M29) DG(N62):DC(M28) DT(N63):DA(M27) DG(N64):DC(M26) DC(N65):DG(M25) DA(N66):DT(M24) DC(N67):DG(M23) DA(N68):DT(M22) DA(N69):DT(M21) DA(N70):DT(M20) DC(N71):DG(M19) DA(N72):DT(M18) DA(N73):DT(M17) DT(N74):DA(M16) DA(N75):DT(M15) DC(N76):DG(M14) DT(N77):DA(M13) DT(N78):DA(M12) DA(N79):DT(M11) DA(N80):DT(M10) DA(N81):DT(M9) DT(N82):DA(M8) DA(N83):DT(M7) chainE (393) LYS447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nvttpevafreyqtnclasyisadpditpsnlilqgysgtgktytlkkyfnanpnlhavwlepvelvswkpllqaiartvqyklktlypnipttdydplqveepfllvktlhnifvqyeslqektclflildgfdslqdldaalfnkyiklnellpkdskinikfiytmletsflqrysthciptvmfprynvdevstilvmsrcgelmedsclrkriieeqitdctddqfqnvaanfihlivqafhsytgndifalndlidfkwpkyvsritkenifeplalyksaiklflstddnlsqtydlsiiskylliasyicsyleprydasifsrknprylqpslfaierllaifqaifpslmkanievfqnlselhtlkliattmnknidylspKvrwkvnvpweiikeisesvhfnisdyfsd >5v9x_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF MYCOBACTERIUM SMEGMATIS HELICASE LHR BOUND TO SSDNA AND AMP-PNP organism=Mycobacterium smegmatis DNA sequence DG(B1) DA(B2) DC(B3) DC(B4) DT(B5) DG(B6) DC(B7) DT(B8) DG(B9) DC(B10) DG(B11) DG(B12) DA(B13) DT(B14) DT(B15) chainA (170) ARG180 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (326) SER362 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (347) PRO383 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (375) HIS411 0 0 39 0 0 0 0 0 0 0 0 0 0 0 0 (477) ARG519 0 0 0 0 0 0 0 0 0 0 12 8 0 0 0 (480) VAL522 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (481) THR523 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (486) ILE528 0 0 0 0 0 0 0 19 20 0 0 0 0 0 0 (487) PRO529 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (489) ARG531 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (521) TRP597 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 (524) ASP600 0 0 0 0 0 17 14 0 0 0 0 0 0 0 0 (525) SER601 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (697) ARG777 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 (767) ALA847 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (768) SER848 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (771) PHE851 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence adplgrfsaltrewfttafaaptpaqadawsaisegnntlviaptgsgktlaaflwaidrladpqgtqvlyvsplkalavdvernlrtpltgitrvaerhglpapsitvgvrsgdtppnqrramianppdvlittpeslflmltsaaretltsvrtvivdevhavaatkRgahlalslerldqlldtpaqriglsatvrppeevarflsgqapttivcppaaktfdlsvqvpvpdmanldnnsiwpdveerivdlveahnssivfansrrlaerltsrlneihaersgieppllarahhgsvskeqraqveddlksgrlravvatSslelgidmgavdlviqveapPsvasglqrvgraghqvgeisqgvlfpkHrtdligcavtvqrmqtgdietlrvpanpldvlaqhtvavaalepvdadawfdavrrsapfatlprsafeatldllsgkaelrprlvydrdtgtltarpgaqRlaVTsggaIPdRgmftvylaseteeldeemvyespgqparlpfWrgDSvgrpaelgaavgaftgelasldrkafdkrcqkmgfagyatdnlhqllreqreatgvvpsdttfvverfrdelgdwrvilhspyglrvhgplalavgrrlrerygidekptasddgiivrlpdspgadlfvfdadeiepivtaevggsalfasrfrecaaralllprrhpgkRsplwhqrqraaqlldiarkypdfpivleavreclqdvydvpalielmhkiaqrrlrivevetatpspfaASllFg >5va0_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN IN COMPLEX WITH AP-1 RESPONSE ELEMENT FROM VCAM-1 PROMOTER organism=Homo sapiens DNA sequence DC(C517):DG(D516) DG(C518):DC(D515) DG(C519):DC(D514) DC(C520):DG(D513) DT(C521):DA(D512) DG(C522):DC(D511) DA(C523):DT(D510) DC(C524):DG(D509) DT(C525):DA(D508) DC(C526):DG(D507) DA(C527):DT(D506) DT(C528):DA(D505) DC(C529):DG(D504) DA(C530):DT(D503) DA(C531):DT(D502) DG(C532):DC(D501) chainA ( 25) VAL443 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 29) ARG447 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 chainB ( 25) VAL443 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG447 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klclvcsdeasgchygvltcgsckVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnl/klclvcsdeasgchygvltcgsckVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >5va0_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN IN COMPLEX WITH AP-1 RESPONSE ELEMENT FROM VCAM-1 PROMOTER organism=Homo sapiens DNA sequence DC(C517):DG(D516) DG(C518):DC(D515) DG(C519):DC(D514) DC(C520):DG(D513) DT(C521):DA(D512) DG(C522):DC(D511) DA(C523):DT(D510) DC(C524):DG(D509) DT(C525):DA(D508) DC(C526):DG(D507) DA(C527):DT(D506) DT(C528):DA(D505) DC(C529):DG(D504) DA(C530):DT(D503) DA(C531):DT(D502) DG(C532):DC(D501) chainB ( 25) VAL443 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG447 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klclvcsdeasgchygvltcgsckVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >5va7_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - IL11 AP-1 RECOGNITION ELEMENT COMPLEX organism=Homo sapiens DNA sequence DC(D840):DG(C874) DA(D841):DT(C873) DT(D842):DA(C872) DC(D843):DG(C871) DC(D844):DG(C870) DT(D845):DA(C869) DG(D846):DC(C868) DA(D847):DT(C867) DC(D848):DG(C866) DT(D849):DA(C865) DC(D850):DG(C864) DA(D851):DT(C863) DC(D852):DG(C862) DC(D853):DG(C861) DC(D854):DG(C860) DT(D855):DA(C859) chainA ( 24) LYS442 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 25) VAL443 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 29) ARG447 0 0 0 0 0 11 13 2 0 0 0 0 0 0 0 0 chainB ( 29) ARG447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence klclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnl/klclvcsdeasgchygvltcgsckvffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnl >5va7_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - IL11 AP-1 RECOGNITION ELEMENT COMPLEX organism=Homo sapiens DNA sequence DC(D840):DG(C874) DA(D841):DT(C873) DT(D842):DA(C872) DC(D843):DG(C871) DC(D844):DG(C870) DT(D845):DA(C869) DG(D846):DC(C868) DA(D847):DT(C867) DC(D848):DG(C866) DT(D849):DA(C865) DC(D850):DG(C864) DA(D851):DT(C863) DC(D852):DG(C862) DC(D853):DG(C861) DC(D854):DG(C860) DT(D855):DA(C859) chainB ( 29) ARG447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence klclvcsdeasgchygvltcgsckvffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnl >5vaj_A:Ribonuclease_H-like; title=BHRNASE H - AMIDE-RNA/DNA COMPLEX organism=Bacillus halodurans DNA sequence DG(D1) DA(D2) DA(D3) DT(D4) DC(D5) DA(D6) DG(D7) DG(D8) DT(D9) DG(D10) DT(D11) DC(D12) chainA ( 16) ASN77 0 0 0 4 0 0 0 0 0 0 0 0 ( 44) ASN105 0 0 0 0 7 0 0 0 0 0 0 0 ( 45) ASN106 0 0 0 0 5 1 0 0 0 0 0 0 ( 73) GLN134 0 0 0 0 0 1 0 0 0 0 0 0 ( 74) THR135 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence eiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygrk >5vaj_AB:Ribonuclease_H-like; title=BHRNASE H - AMIDE-RNA/DNA COMPLEX organism=Bacillus halodurans DNA sequence DG(D1) DA(D2) DA(D3) DT(D4) DC(D5) DA(D6) DG(D7) DG(D8) DT(D9) DG(D10) DT(D11) DC(D12) chainA ( 16) ASN77 0 0 0 4 0 0 0 0 0 0 0 0 ( 44) ASN105 0 0 0 0 7 0 0 0 0 0 0 0 ( 45) ASN106 0 0 0 0 5 1 0 0 0 0 0 0 ( 73) GLN134 0 0 0 0 0 1 0 0 0 0 0 0 ( 74) THR135 0 0 0 0 0 2 0 0 0 0 0 0 chainB ( 19) ASN77 0 0 0 0 0 0 0 1 4 1 0 0 ( 47) ASN105 0 0 0 0 0 0 0 0 0 8 0 0 ( 48) ASN106 0 0 0 0 0 0 0 0 0 11 1 0 ( 76) GLN134 0 0 0 0 0 0 0 0 0 0 0 1 ( 77) THR135 0 0 0 0 0 0 0 0 0 1 1 0 prot.sequence eiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygrk/akeeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadyg >5vbs_A:DNA/RNA_polymerases; title=STRUCTURAL BASIS FOR A SIX LETTER ALPHABET INCLUDING GATCKX organism=Moloney murine leukemia virus (isolate Shinnick) / Moloney murine leukemia virus (isolate Shinnick) DNA sequence DC(B1):DG(G16) DT(B2):DA(G15) DT(B3):DA(G14) DA(B4):DT(G13) DT(B5):DA(G12) DT(B8):DA(G9) chainA ( 76) LEU99 20 0 0 0 0 0 ( 77) PRO100 1 0 0 0 0 0 ( 78) VAL101 1 0 0 0 0 0 ( 86) ASP114 12 0 0 0 0 0 ( 88) ARG116 7 8 3 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiqrlldqgilvpcqspwntplLPVkdyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpsgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >5vc9_F: title=ZINC FINGER OF HUMAN CXXC4 IN COMPLEX WITH CPG DNA organism=HOMO SAPIENS DNA sequence DG(E1):DC(D12) DC(E2):DG(D11) DC(E3):DG(D10) DA(E4):DT(D9) DA(E5):DT(D8) DC(E6):DG(D7) DG(E7):DC(D6) DT(E8):DA(D5) DT(E9):DA(D4) DG(E10):DC(D3) DG(E11):DC(D2) DC(E12):DG(D1) chainF ( 31) HIS164 0 0 0 0 0 12 10 11 0 0 0 0 ( 32) GLN165 0 0 0 0 1 5 6 0 0 0 0 0 prot.sequence kkrkrcgvcvpckrlincgvcsscrnrktgHQickfrkceelkk >5vez_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH 8-OXOG:A AT THE PRIMER TERMINUS AND INCOMING DCTP ANALOG organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 29 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5vfx_A:Ribonuclease_H-like; title=STRUCTURE OF AN ACCESSORY PROTEIN OF THE PCW3 RELAXOSOME IN COMPLEX WITH THE ORIGIN OF TRANSFER (ORIT) DNA organism=CLOSTRIDIUM PERFRINGENS DNA sequence DA(I1):DT(J23) DA(I2):DT(J22) DG(I3):DC(J21) DG(I4):DC(J20) DA(I5):DT(J19) DA(I6):DT(J18) DC(I7):DG(J17) DT(I8):DA(J16) DT(I9):DA(J15) DT(I10):DA(J14) DA(I11):DT(J13) DC(I12):DG(J12) DA(I13):DT(J11) DG(I14):DC(J10) DG(I15):DC(J9) DG(I16):DC(J8) DA(I17):DT(J7) DA(I18):DT(J6) DC(I19):DG(J5) DT(I20):DA(J4) DT(I21):DA(J3) DT(I22):DA(J2) DA(I23):DT(J1) chainA ( 27) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 4 0 ( 69) ASP70 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG71 0 0 0 0 0 0 0 0 0 0 0 4 22 10 0 0 0 0 0 0 0 0 0 ( 74) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 14 8 2 0 0 0 0 0 ( 76) LYS77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 7 0 0 0 ( 81) ASN82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 ( 83) TYR84 0 0 0 0 0 0 0 0 0 0 0 0 0 14 9 0 0 0 0 0 0 0 0 prot.sequence kdlnlyakelvdvvnylmkknqlvfsRnnkfiyvntetiksmlekrnydtvdgklylwrelewiecaeDRfnkRiKidgeNmYavvikyssysilkrlyl >5vfx_BC:Ribonuclease_H-like; title=STRUCTURE OF AN ACCESSORY PROTEIN OF THE PCW3 RELAXOSOME IN COMPLEX WITH THE ORIGIN OF TRANSFER (ORIT) DNA organism=CLOSTRIDIUM PERFRINGENS DNA sequence DT(L1):DA(K23) DA(L2):DT(K22) DA(L3):DT(K21) DA(L4):DT(K20) DG(L5):DC(K19) DT(L6):DA(K18) DT(L7):DA(K17) DC(L8):DG(K16) DC(L9):DG(K15) DC(L10):DG(K14) DT(L11):DA(K13) DG(L12):DC(K12) DT(L13):DA(K11) DA(L14):DT(K10) DA(L15):DT(K9) DA(L16):DT(K8) DG(L17):DC(K7) DT(L18):DA(K6) DT(L19):DA(K5) DC(L20):DG(K4) DC(L21):DG(K3) DT(L22):DA(K2) DT(L23):DA(K1) chainB ( 27) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 1 0 0 0 0 0 0 0 ( 74) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 12 16 0 0 ( 76) LYS77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 3 0 0 0 0 0 ( 81) ASN82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 ( 83) TYR84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 chainC ( 27) ARG28 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASP70 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 ( 70) ARG71 0 0 0 0 0 0 0 0 0 9 19 4 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG75 0 0 0 0 0 2 11 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LYS77 0 0 0 4 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ASN82 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) TYR84 0 0 0 0 0 0 0 0 9 12 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kdlnlyakelvdvvnylmkknqlvfsRnnkfiyvntetiksmlekrnydtvdgklylwrelewiecaedrfnkRiKidgeNmYavvikyssysilkrlyl/kdlnlyakelvdvvnylmkknqlvfsRnnkfiyvntetiksmlekrnydtvdgklylwrelewiecaeDRfnkRiKidgeNmYavvikyssysilkrlyl >5vfx_FG:Ribonuclease_H-like; title=STRUCTURE OF AN ACCESSORY PROTEIN OF THE PCW3 RELAXOSOME IN COMPLEX WITH THE ORIGIN OF TRANSFER (ORIT) DNA organism=CLOSTRIDIUM PERFRINGENS DNA sequence DT(P1):DA(O23) DA(P2):DT(O22) DA(P3):DT(O21) DA(P4):DT(O20) DG(P5):DC(O19) DT(P6):DA(O18) DT(P7):DA(O17) DC(P8):DG(O16) DC(P9):DG(O15) DC(P10):DG(O14) DT(P11):DA(O13) DG(P12):DC(O12) DT(P13):DA(O11) DA(P14):DT(O10) DA(P15):DT(O9) DA(P16):DT(O8) DG(P17):DC(O7) DT(P18):DA(O6) DT(P19):DA(O5) DC(P20):DG(O4) DC(P21):DG(O3) DT(P22):DA(O2) DT(P23):DA(O1) chainF ( 27) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 5 4 1 0 0 0 0 0 0 0 0 ( 70) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 74) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 11 17 0 0 ( 76) LYS77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 6 0 0 0 0 0 ( 81) ASN82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 ( 83) TYR84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 chainG ( 27) ARG28 0 2 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASP70 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 ( 70) ARG71 0 0 0 0 0 0 0 0 0 7 15 2 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG75 0 0 0 0 0 2 9 13 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LYS77 0 0 0 4 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ASN82 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) TYR84 0 0 0 0 0 0 0 0 9 13 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kdlnlyakelvdvvnylmkknqlvfsRnnkfiyvntetiksmlekrnydtvdgklylwrelewiecaedRfnkRiKidgeNmYavvikyssysilkrlyle/kdlnlyakelvdvvnylmkknqlvfsRnnkfiyvntetiksmlekrnydtvdgklylwrelewiecaeDRfnkRiKidgeNmYavvikyssysilkrlyl >5vhe_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=DHX36 IN COMPLEX WITH THE C-MYC G-QUADRUPLEX organism=Bos taurus DNA sequence DG(B2):DG(B7) DG(B3):DG(B8) DG(B4):DT(B9) DT(B5):DA(B10) DG(B6):DG(B12) DG(B7):DG(B11) chainA ( 9) ILE65 0 0 0 8 5 0 ( 13) TYR69 3 0 0 0 48 0 ( 14) ALA70 7 0 0 0 0 0 ( 17) GLN73 4 0 0 0 0 0 prot.sequence pghlkgreIglwYAkkQgqknkeaerqeravvhmderreeqivqllhsvqtkteayidrdseyllqenepdatldqqlledlqkkktdlryiemqrfreklpsygmqkelvnmidnhqvtvisgetgcgkttqvtqfildnyiergkgsacrivctqprrisaisvaervaaeraescgngnstgyqirlqsrlprkqgsilycttgiilqwlqsdphlssvshivldeihernlqsdvlmtvvkdllsyrpdlkvvlmsatlnaekfseyfgncpmihipgftfpvveyllediiekiryvpeqkghvnrqekyyyeaiykerwpgylrelrqrysastvdvvemmddekvdlnliaaliryivleeedgailvflpgwdnistlhdllmsqvmfksdkfiiiplhslmptvnqtqvfkrtppgvrkiviatniaetsitiddvvyvidggkikethfdtqnnistmsaewvskanakqrkgragrvqpghcyhlynslrasllddyqlpeilrtpleelclqikilrlggiahflsrlmdppsneavllsikhlmelnaldkqeeltplgvhlarlpvephigkmilfgalfccldpvltiaaslsfkdpfviplgkekvadarrkelaaatasdhltvvnafkgwekakqrgfryekdycweyflssntlqmlhnmkgqfaehllgagfvssrnpqdpesninsdnekiikavicaglypkvakirlnlgkkrkmvkvytktdgvvaihpksvnveqtefnynwliyhlkmrtssiylydctevspycllffggdisiqkdndqetiavdewiifqspariahlvkelrkeldillqekiesphpvdwkdtksrdcavlsaiidlikt >5vhv_B:ARM_repeat; title=PSEUDOMONAS FLUORESCENS ALKYLPURINE DNA GLYCOSYLASE ALKC BOUND TO DNA CONTAINING AN OXOCARBENIUM-INTERMEDIATE ANALOG organism=Pseudomonas fluorescens DNA sequence DA(F2):DT(E11) DG(F3):DC(E10) DA(F4):DT(E9) DC(F5):DG(E8) DT(F7):DA(E6) DG(F8):DC(E5) DG(F9):DC(E4) DA(F10):DT(E3) DC(F11):DG(E2) chainB (159) PRO163 0 0 0 0 1 0 0 0 0 (160) TRP164 0 0 0 0 6 2 0 0 0 (332) THR336 0 0 0 0 2 0 0 0 0 (333) THR337 0 0 0 0 1 4 1 0 0 prot.sequence aapalkeifnverlqhiasemtavypafdakgflkhakaglaelsvmqrmarvseslhavipldypqtltllyalaprlnsgfvslflphyvasygrddfkrsmaalkyfttfgsaefairhfllhdfqrtlavmqawsqddnehvrrlasegsrprlPWsfrlaevqadpelcasildhlkadsslyvrksvanhlnditkdhpewvlsliegwnlenphtawiarhalrslikqgntraltlmgagakaevkihhlmvtpavinlgerinlsftlestapapqklvvdyaidyvkstghgaakvfklkafslgagaqqhirreqhirdmTTrkhypgrhvvhvlvngerlgsaefelra >5vi0_A:ARM_repeat; title=PSEUDOMONAS FLUORESCENS ALKYLPURINE DNA GLYCOSYLASE ALKC BOUND TO DNA CONTAINING AN ABASIC SITE ANALOG organism=Pseudomonas fluorescens DNA sequence DG(F2):DC(E11) DT(F3):DA(E10) DC(F4):DG(E9) DC(F5):DG(E8) DA(F6):DT(E6) DG(F8):DC(E5) DT(F9):DA(E4) DC(F10):DG(E3) DT(F11):DA(E2) chainA (159) PRO163 0 0 0 2 0 0 0 0 0 (160) TRP164 0 0 3 8 0 0 0 0 0 (329) THR337 0 0 0 0 0 1 2 0 0 prot.sequence aapalkeifnverlqhiasemtavypafdakgflkhakaglaelsvmqrmarvseslhavipldypqtltllyalaprlnsgfvslflphyvasygrddfkrsmaalkyfttfgsaefairhfllhdfqrtlavmqawsqddnehvrrlasegsrprlPWsfrlaevqadpelcasildhlkadsslyvrksvanhlnditkdhpewvlsliegwnlenphtawiarhalrslikqgntraltlmgaevkihhlmvtpavinlgerinlsftlestapapqklvvdyaidyvkstghgaakvfklkafslgagaqqhirreqhirdmtTrkhypgrhvvhvlvngerlgsaefelra >5vi5_CDF: title=STRUCTURE OF MYCOBACTERIUM SMEGMATIS TRANSCRIPTION INITIATION COMPLEX WITH A FULL TRANSCRIPTION BUBBLE organism=? DNA sequence DG(P1):DG(O44) DC(P2):DC(O43) DA(P3):DA(O42) DT(P4):DC(O41) DC(P5):DT(O40) DC(P6):DG(O39) DG(P7):DC(O38) DT(P8):DC(O37) DG(P9):DG(O36) DA(P10):DA(O35) DG(P11):DG(O34) DT(P12):DG(O33) DC(P13):DG(O32) DG(P14):DT(O31) DA(P15):DC(O30) DG(P16):DA(O29) DG(P17):DT(O28) DA(P18):DA(O27) DA(P24):DT(O26) DG(P25):DC(O25) DC(P26):DG(O24) DA(P27):DT(O23) DC(P28):DG(O22) DA(P29):DT(O21) DA(P30):DT(O20) DT(P31):DA(O19) DT(P32):DA(O18) DT(P33):DA(O17) DA(P34):DT(O16) DA(P35):DT(O15) DC(P36):DG(O14) DA(P37):DT(O13) DC(P38):DG(O12) DT(P39):DA(O11) DT(P40):DA(O10) DT(P41):DA(O9) DT(P42):DA(O8) DG(P43):DC(O7) DT(P44):DA(O6) DC(P45):DG(O5) DA(P46):DT(O4) DA(P47):DT(O3) DG(P48):DC(O2) DC(P49):DG(O1) chainC (144) ARG164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ILE196 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) PRO197 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ALA201 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP202 0 0 0 0 0 0 22 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) ARG219 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) GLU276 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ILE361 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) ASP362 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG367 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (401) PHE430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (425) LEU454 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) ARG458 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (433) GLU462 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) VAL463 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (285) ARG291 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) ARG389 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) ALA501 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (496) PRO502 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (854) THR866 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (855) ALA867 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 16) ASP164 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL166 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG167 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU170 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ILE173 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU178 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLU184 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ASN237 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ARG239 0 0 0 0 0 0 0 0 0 0 0 0 18 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) LEU240 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) PHE255 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) PHE273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) ASP274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) LYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) TYR279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) SER282 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) THR283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) TYR284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) THR286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) TRP287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) TRP288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLN291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) THR294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) ARG295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) VAL308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) HIS309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) GLU312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ILE365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) THR437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (286) ARG438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 7 0 0 0 0 0 (287) GLU439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 7 6 0 0 (288) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 (290) ARG442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 (291) GLN443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewlvgsdrwrqaaidrgeenpvggleevlaelspiedfsgsmslsfsdprfdevkasvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingteRvvvsqlvrspgvyfdetidkstektlhsvkvIPgrgAWlefvridRkrrqpvtvllkalgwtneniverfgfseimmgtlekdttsgtdealldiyrklrpgEpptkesaqtllenlffkekrydlarvgrykvnkklglnagkpitsstlteedvvatieylvrlhegqtsmtvpggvevpvevddIDhfgnRrlrtvgeliqnqirvglsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqFmdqnnplsglthkrrlsalgpggLsreRaglEVrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvengvvtdqidyltadeedrhvvaqansptdengrftedrvmvrkkggevefvsadqvdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvadktgvieevsadyitvmaddgtrqsyrlrkfarsnhgtcanqrpivdagqrveagqviadgpctqngemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnvsdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsredddelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpflpdgtpvdiilnthgvprrmnigqilethlgwvakagwnidvaagvpdwasklpeelysapadstvatpvfdgaqegelagllgstlpnrdgevmvdadgkstlfdgrsgepfpypvtvgymyilklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaiemrdgd/vnffdelriglataddirnwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvddemrhnelstleaemavekkavedqrdadlearaqkleadlaeleaegaksdvrrkvrdsgeremrqlrdraqreldrldeiwntftklapkqlivdevlyrelqdrygeyftgamgaesikklienfdidaeaeslrevirsgkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepqlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgkplamprldmvtglyylttlvegatgeyqaatkdapeqgvysspaeaimamdrgalsvrakikvrltelrpptdleaqlfengwkpgdawteettlgrvmfnellpksypfvneqmhkkvqariindlaerfpmivvaqtvdklkdagfywatrsgvtvsmadvlvppqkqeilerheaeadaierkyhterneslvkiwqdateevgkaleefypadnpiitivksgatgnltqtrtlagmkglvtnpkgefiprpikssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdceterginvtlaergpdirdahvetsafartlatdavdangnviierghdlgdpaidallaagittvkvrsvltctsatgvcamcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprnkapiadvagrvrleesdkffkitivpddggeevvydklskrqrlrvgvlsdgdhvevgdqlmegaadphevlrvqgprevqihlvkevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslteraefeaenrrvvaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtgisryrninvqpteearaaa/alrqarkdaeltasaDsVRayLkqIgkvaLlnaeeEvelakrieaglyatqklaelaekgeklpvqqrrdmqwicrdgdraknhlleaNlRLvvslakrytgrgmaFldliqegnlgliravekFDytKgYkfSTYaTWWirQaiTRamadqartiripVHmvEvinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtIdsqlgdfiedseavvavdavsftllqdqlqsvletlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyld >5vi8_FT: title=STRUCTURE OF A MYCOBACTERIUM SMEGMATIS TRANSCRIPTION INITIATION COMPLEX WITH AN UPSTREAM-FORK PROMOTER FRAGMENT organism=? DNA sequence DA(P1):DT(O26) DG(P2):DC(O25) DC(P3):DG(O24) DA(P4):DT(O23) DC(P5):DG(O22) DA(P6):DT(O21) DA(P7):DT(O20) DT(P8):DA(O19) DT(P9):DA(O18) DT(P10):DA(O17) DA(P11):DT(O16) DA(P12):DT(O15) DC(P13):DG(O14) DA(P14):DT(O13) DC(P15):DG(O12) DT(P16):DA(O11) DT(P17):DA(O10) DT(P18):DA(O9) DT(P19):DA(O8) DG(P20):DC(O7) DT(P21):DA(O6) DC(P22):DG(O5) DA(P23):DT(O4) DA(P24):DT(O3) DG(P25):DC(O2) DC(P26):DG(O1) chainF (142) TRP287 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) TRP288 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN291 10 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) THR294 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG295 0 6 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) VAL308 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) HIS309 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) GLU312 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) LEU427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (290) THR437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 (291) ARG438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 16 4 0 0 0 0 0 (292) GLU439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 6 1 0 0 (293) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 (295) ARG442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (296) GLN443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 chainT ( 9) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 prot.sequence akkapakraaksaaakaadsvraylkqigkvallnaeeevelakrieaglyatqklaelaekgeklpvqqrrdmqwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatWWirQaiTRamadqartiripVHmvEvinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigddsqlgdfiedseavvavdavsftllqdqlqsvletlsereagvvrlrfgltdgqprtLdeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyld/iddldltvRsynclkregvhtvgelvartesdlldirNfgqksidevkiklhq >5vi8_T:C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=STRUCTURE OF A MYCOBACTERIUM SMEGMATIS TRANSCRIPTION INITIATION COMPLEX WITH AN UPSTREAM-FORK PROMOTER FRAGMENT organism=? DNA sequence DG(O1):DC(P26) DC(O2):DG(P25) DT(O3):DA(P24) DT(O4):DA(P23) DG(O5):DC(P22) DA(O6):DT(P21) DC(O7):DG(P20) DA(O8):DT(P19) DA(O9):DT(P18) DA(O10):DT(P17) DA(O11):DT(P16) DG(O12):DC(P15) DT(O13):DA(P14) DG(O14):DC(P13) DT(O15):DA(P12) DT(O16):DA(P11) DA(O17):DT(P10) DA(O18):DT(P9) DA(O19):DT(P8) DT(O20):DA(P7) DT(O21):DA(P6) DG(O22):DC(P5) DT(O23):DA(P4) DG(O24):DC(P3) DC(O25):DG(P2) DT(O26):DA(P1) chainT ( 9) ARG259 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iddldltvRsynclkregvhtvgelvartesdlldirNfgqksidevkiklhq >5vl9_A:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=CRYSTAL STRUCTURE OF EILR IN COMPLEX WITH EILO DNA ELEMENT organism=Enterobacter lignolyticus DNA sequence DG(H1):DC(G14) DA(H2):DT(G13) DA(H3):DT(G12) DA(H4):DT(G11) DG(H5):DC(G10) DT(H6):DA(G9) DT(H7):DA(G8) DG(H8):DC(G7) DG(H9):DC(G6) DA(H10):DT(G5) DC(H11):DG(G4) DA(H12):DT(G3) DT(H13):DA(G2) DA(H14):DT(G1) chainA ( 2) TYR3 0 0 3 6 6 0 0 0 0 0 0 0 0 0 ( 30) VAL31 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 31) ARG32 0 0 0 0 0 0 0 0 0 2 10 15 0 0 ( 40) ALA41 0 0 0 0 0 0 3 1 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 45) HIS46 0 0 0 0 0 0 0 0 4 5 0 0 0 0 ( 46) HIS47 0 0 0 0 0 9 9 4 0 0 0 0 0 0 prot.sequence gYlnreerretimqaamrvaldqgftgmtVRniataagvAagQvHHhftssgelksqafirviremmdlqrlsrtagwreqlfsalgsedgrlepyirlwrqaqlladsdpeiksaylltmnlwhdeavriiraghaageftlrdsaeniawrlislvcgldgiyvlgmpevddaaftrhlqhviqlelfs >5vl9_AD:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=CRYSTAL STRUCTURE OF EILR IN COMPLEX WITH EILO DNA ELEMENT organism=Enterobacter lignolyticus DNA sequence DG(H1):DC(G14) DA(H2):DT(G13) DA(H3):DT(G12) DA(H4):DT(G11) DG(H5):DC(G10) DT(H6):DA(G9) DT(H7):DA(G8) DG(H8):DC(G7) DG(H9):DC(G6) DA(H10):DT(G5) DC(H11):DG(G4) DA(H12):DT(G3) DT(H13):DA(G2) DA(H14):DT(G1) chainA ( 2) TYR3 0 0 3 6 6 0 0 0 0 0 0 0 0 0 ( 30) VAL31 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 31) ARG32 0 0 0 0 0 0 0 0 0 2 10 15 0 0 ( 40) ALA41 0 0 0 0 0 0 3 1 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 45) HIS46 0 0 0 0 0 0 0 0 4 5 0 0 0 0 ( 46) HIS47 0 0 0 0 0 9 9 4 0 0 0 0 0 0 chainD ( 43) HIS46 0 0 0 0 0 0 5 0 0 0 0 0 0 0 prot.sequence gYlnreerretimqaamrvaldqgftgmtVRniataagvAagQvHHhftssgelksqafirviremmdlqrlsrtagwreqlfsalgsedgrlepyirlwrqaqlladsdpeiksaylltmnlwhdeavriiraghaageftlrdsaeniawrlislvcgldgiyvlgmpevddaaftrhlqhviqlelfs/lnreerretimqaamrvaldqgftgmtvrniataagvaagqvHhhftssgelksqafirviremmdlqrlsrtagwreqlfsalgsedgrlepyirlwrqaqlladsdpeiksaylltmnlwhdeavriiraghaageftlrdsaeniawrlislvcgldgiyvlgmpevddaaftrhlqhviqlelfs >5vl9_BC:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=CRYSTAL STRUCTURE OF EILR IN COMPLEX WITH EILO DNA ELEMENT organism=Enterobacter lignolyticus DNA sequence DT(E1):DA(F14) DA(E2):DT(F13) DT(E3):DA(F12) DG(E4):DC(F11) DT(E5):DA(F10) DC(E6):DG(F9) DC(E7):DG(F8) DA(E8):DT(F7) DA(E9):DT(F6) DC(E10):DG(F5) DT(E11):DA(F4) DT(E12):DA(F3) DT(E13):DA(F2) DC(E14):DG(F1) chainB ( 28) ARG32 0 0 0 0 0 6 5 0 0 0 0 0 0 0 ( 42) HIS46 0 0 0 0 0 0 0 5 0 0 0 0 0 0 chainC ( 2) TYR3 0 0 0 0 0 0 0 0 0 6 6 3 0 0 ( 30) VAL31 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 31) ARG32 0 0 15 11 2 0 0 0 0 0 0 0 0 0 ( 40) ALA41 0 0 0 0 0 0 1 3 0 0 0 0 0 0 ( 41) ALA42 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 3 1 0 0 0 0 0 ( 45) HIS46 0 0 0 0 8 2 0 0 0 0 0 0 0 0 ( 46) HIS47 0 0 0 0 0 0 5 9 6 0 0 0 0 0 prot.sequence nreerretimqaamrvaldqgftgmtvRniataagvaagqvHhhftssgelksqafirviremmdlqrlsrtagwreqlfsalgsedgrlepyirlwrqaqlladsdpeiksaylltmnlwhdeavriiraghaageftlrdsaeniawrlislvcgldgiyvlgmpevddaaftrhlqhviqlelfs/gYlnreerretimqaamrvaldqgftgmtVRniataagvAAgQvHHhftssgelksqafirviremmdlqrlsrtagwreqlfsalgsedgrlepyirlwrqaqlladsdpeiksaylltmnlwhdeavriiraghaageftlrdsaeniawrlislvcgldgiyvlgmpevddaaftrhlqhviqlelfs >5vmu_A:beta-beta-alpha_zinc_fingers; title=KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH A DOUBLE CPG-METHYLATED DNA RESEMBLING THE SPECIFIC KAISO BINDING SEQUENCE (KBS) organism=Homo sapiens DNA sequence DT(D1):DA(E36) DG(D2):DC(E35) DC(D3):DG(E34) DT(D4):DA(E33) DT(D5):DA(E32) DC(D6):DG(E31) DC(D7):DG(E30) 5CM(D8):DG(E29) DG(D9):5CM(E28) 5CM(D10):DG(E27) DG(D11):5CM(E26) DA(D12):DT(E25) DA(D13):DT(E24) DT(D14):DA(E23) DA(D15):DT(E22) DA(D16):DT(E21) DC(D17):DG(E20) DG(D18):DC(E19) chainA ( 25) CYS505 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 27) THR507 0 0 0 0 0 0 0 0 0 1 3 2 0 0 0 0 0 0 ( 28) SER508 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 31) ARG511 0 0 0 0 0 0 0 13 11 6 8 0 0 0 0 0 0 0 ( 53) LEU533 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 55) GLU535 0 0 0 0 0 0 3 13 10 1 0 0 0 0 0 0 0 0 ( 56) TYR536 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 ( 59) LYS539 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 81) ASN561 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) TYR562 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 ( 83) GLN563 0 0 0 2 8 4 5 0 0 0 0 0 0 0 0 0 0 0 (115) ARG595 0 0 0 0 0 0 0 0 0 3 9 7 2 0 0 0 0 0 (117) TYR597 0 0 0 0 0 0 0 0 0 7 3 1 0 0 0 0 0 0 prot.sequence ddhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfplaEYrtkheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqYayls >5vmv_A:beta-beta-alpha_zinc_fingers; title=KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH ITS DOUBLE CPG-METHYLATED DNA CONSENSUS BINDING SITE organism=HOMO SAPIENS DNA sequence DT(D1):DA(E36) DG(D2):DC(E35) DC(D3):DG(E34) DT(D4):DA(E33) DT(D5):DA(E32) DC(D6):DG(E31) DT(D7):DA(E30) 5CM(D8):DG(E29) DG(D9):5CM(E28) 5CM(D10):DG(E27) DG(D11):5CM(E26) DA(D12):DT(E25) DG(D13):DC(E24) DA(D14):DT(E23) DA(D15):DT(E22) DG(D16):DC(E21) DC(D17):DG(E20) DA(D18):DT(E19) chainA ( 25) CYS505 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 27) THR507 0 0 0 0 0 0 0 0 0 1 3 2 0 0 0 0 0 0 ( 28) SER508 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 31) ARG511 0 0 0 0 0 0 0 12 12 9 10 0 0 0 0 0 0 0 ( 53) LEU533 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 55) GLU535 0 0 0 0 0 0 4 12 10 1 0 0 0 0 0 0 0 0 ( 56) TYR536 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS539 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 ( 82) TYR562 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 ( 83) GLN563 0 0 0 1 6 2 4 0 0 0 0 0 0 0 0 0 0 0 (115) ARG595 0 0 0 0 0 0 0 0 0 3 8 11 3 0 0 0 0 0 prot.sequence ddhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfplaEYrtKheihhtgerryqclacgksfinYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRq >5vmw_A:beta-beta-alpha_zinc_fingers; title=KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH A DOUBLE CPG-METHYLATED DNA RESEMBLING THE SPECIFIC KAISO BINDING SEQUENCE (KBS) organism=Homo sapiens DNA sequence DC(E19):DG(D18) DG(E20):DC(D17) DT(E21):DA(D16) DT(E22):DA(D15) DA(E23):DT(D14) DT(E24):DA(D13) DT(E25):DA(D12) 5CM(E26):DG(D11) DG(E27):5CM(D10) 5CM(E28):DG(D9) DG(E29):5CM(D8) DG(E30):DC(D7) DG(E31):DC(D6) DA(E32):DT(D5) DA(E33):DT(D4) DG(E34):DC(D3) DC(E35):DG(D2) DA(E36):DT(D1) chainA ( 25) CYS505 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 27) THR507 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 ( 28) SER508 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 31) ARG511 0 0 0 0 0 0 0 8 7 11 13 0 0 0 0 0 0 0 ( 53) LEU533 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 55) GLU535 0 0 0 0 0 0 0 0 1 10 13 3 0 0 0 0 0 0 ( 56) TYR536 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 81) ASN561 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 82) TYR562 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 ( 83) GLN563 0 0 0 0 0 0 0 0 0 0 0 4 7 14 1 0 0 0 (115) ARG595 0 0 0 0 0 0 7 9 3 0 0 0 0 0 0 0 0 0 (117) TYR597 0 0 0 0 0 0 1 2 6 0 0 0 0 0 0 0 0 0 prot.sequence ddhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfplaEYrtkheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqYayls >5vmx_A:beta-beta-alpha_zinc_fingers; title=KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH A HEMI CPG-METHYLATED DNA RESEMBLING THE SPECIFIC KAISO BINDING SEQUENCE (KBS) organism=Homo sapiens DNA sequence DT(D1):DA(E36) DG(D2):DC(E35) DC(D3):DG(E34) DT(D4):DA(E33) DT(D5):DA(E32) DC(D6):DG(E31) DC(D7):DG(E30) 5CM(D8):DG(E29) DG(D9):DC(E28) 5CM(D10):DG(E27) DG(D11):DC(E26) DA(D12):DT(E25) DA(D13):DT(E24) DT(D14):DA(E23) DA(D15):DT(E22) DA(D16):DT(E21) DC(D17):DG(E20) DG(D18):DC(E19) chainA ( 25) CYS505 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 27) THR507 0 0 0 0 0 0 0 0 0 1 3 2 0 0 0 0 0 0 ( 28) SER508 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 31) ARG511 0 0 0 0 0 0 0 14 12 6 3 0 0 0 0 0 0 0 ( 53) LEU533 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 55) GLU535 0 0 0 0 0 0 3 13 5 1 0 0 0 0 0 0 0 0 ( 56) TYR536 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS539 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 81) ASN561 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) TYR562 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 ( 83) GLN563 0 0 0 1 11 6 5 0 0 0 0 0 0 0 0 0 0 0 ( 84) PHE564 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG595 0 0 0 0 0 0 0 0 0 3 7 8 0 0 0 0 0 0 (117) TYR597 0 0 0 0 0 0 0 0 0 7 2 2 0 0 0 0 0 0 prot.sequence ddhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfplaEYrtKheihhtgerryqclacgksfiNYQFmsshiksvhsqdpsgdsklyrlhpcrslqiRqYaylsd >5vmy_A:beta-beta-alpha_zinc_fingers; title=KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH A HEMI CPG-METHYLATED DNA RESEMBLING THE SPECIFIC KAISO BINDING SEQUENCE (KBS) organism=Homo sapiens DNA sequence DT(D1):DA(E36) DG(D2):DC(E35) DC(D3):DG(E34) DT(D4):DA(E33) DT(D5):DA(E32) DC(D6):DG(E31) DC(D7):DG(E30) 5CM(D8):DG(E29) DG(D9):DC(E28) 5CM(D10):DG(E27) DG(D11):DC(E26) DA(D12):DT(E25) DA(D13):DT(E24) DT(D14):DA(E23) DA(D15):DT(E22) DA(D16):DT(E21) DC(D17):DG(E20) DG(D18):DC(E19) chainA ( 25) CYS505 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 27) THR507 0 0 0 0 0 0 0 0 0 1 3 2 0 0 0 0 0 0 ( 28) SER508 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 31) ARG511 0 0 0 0 0 0 0 14 12 6 3 0 0 0 0 0 0 0 ( 53) LEU533 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 55) GLU535 0 0 0 0 0 0 3 12 5 1 0 0 0 0 0 0 0 0 ( 56) TYR536 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 81) ASN561 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) TYR562 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 ( 83) GLN563 0 0 0 1 11 6 6 0 0 0 0 0 0 0 0 0 0 0 ( 84) PHE564 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG595 0 0 0 0 0 0 0 0 0 3 8 8 1 0 0 0 0 0 (117) TYR597 0 0 0 0 0 0 0 0 0 7 3 2 0 0 0 0 0 0 prot.sequence ddhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfplaEYrtkheihhtgerryqclacgksfiNYQFmsshiksvhsqdpsgdsklyrlhpcrslqiRqYayls >5vmz_A:beta-beta-alpha_zinc_fingers; title=KAISO (ZBTB33) E535Q MUTANT ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH A DOUBLE CPG-METHYLATED DNA RESEMBLING THE SPECIFIC KAISO BINDING SEQUENCE (KBS) organism=Homo sapiens DNA sequence DC(E19):DG(D18) DG(E20):DC(D17) DT(E21):DA(D16) DT(E22):DA(D15) DA(E23):DT(D14) DT(E24):DA(D13) DT(E25):DA(D12) 5CM(E26):DG(D11) DG(E27):5CM(D10) 5CM(E28):DG(D9) DG(E29):5CM(D8) DG(E30):DC(D7) DG(E31):DC(D6) DA(E32):DT(D5) DA(E33):DT(D4) DG(E34):DC(D3) DC(E35):DG(D2) DA(E36):DT(D1) chainA ( 25) CYS505 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 27) THR507 0 0 0 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 ( 28) SER508 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 31) ARG511 0 0 0 0 0 0 0 8 7 12 14 0 0 0 0 0 0 0 ( 53) LEU533 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 55) GLN535 0 0 0 0 0 0 0 0 1 9 11 4 0 0 0 0 0 0 ( 56) TYR536 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 59) LYS539 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 81) ASN561 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 82) TYR562 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 ( 83) GLN563 0 0 0 0 0 0 0 0 0 0 0 6 6 11 1 0 0 0 ( 84) PHE564 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (115) ARG595 0 0 0 0 0 1 7 9 3 0 0 0 0 0 0 0 0 0 (117) TYR597 0 0 0 0 0 0 1 4 7 0 0 0 0 0 0 0 0 0 prot.sequence ddhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfplaQYrtkheihhtgerryqclacgksfiNYQFmsshiksvhsqdpsgdsklyrlhpcrslqiRqYaylsd >5voi_CDF: title=X-RAY CRYSTAL STRUCTURE OF BACTERIAL RNA POLYMERASE AND PYRG PROMOTER COMPLEX organism=? DNA sequence DT(G3):DA(H25) DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DA(G9):DT(H19) DG(G10):DC(H18) DA(G11):DT(H17) DG(G12):DC(H16) chainC (415) ARG422 0 0 0 0 0 0 0 0 0 31 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvaPgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmtqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >5vpe_C:Leucine_zipper_domain; title=TRANSCRIPTION FACTOR FOSB/JUND BZIP DOMAIN IN COMPLEX WITH COGNATE DNA, TYPE-I CRYSTAL organism=HOMO SAPIENS DNA sequence DG(G2):DC(H18) DT(G3):DA(H17) DC(G4):DG(H16) DG(G5):DC(H15) DG(G6):DC(H14) DT(G7):DA(H13) DG(G8):DC(H12) DA(G9):DT(H11) DC(G10):DG(H10) DT(G11):DA(H9) DC(G12):DG(H8) DA(G13):DT(H7) DC(G14):DG(H6) DC(G15):DG(H5) DG(G16):DC(H4) DA(G17):DT(H3) DC(G18):DG(H2) DG(G19):DC(H1) chainC ( 9) ARG161 0 0 0 8 5 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ASN165 0 0 0 0 2 9 7 6 0 0 0 0 0 0 0 0 0 0 ( 16) ALA168 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ALA169 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 21) ARG173 0 0 0 0 0 0 0 5 14 18 0 0 0 0 0 0 0 0 prot.sequence eeeekrrvRrerNklAAakcRnrrreltdrlqaetdqleeekaeleseiaelqkekerlefvlvah >5vpe_D:Leucine_zipper_domain;A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=TRANSCRIPTION FACTOR FOSB/JUND BZIP DOMAIN IN COMPLEX WITH COGNATE DNA, TYPE-I CRYSTAL organism=HOMO SAPIENS DNA sequence DC(H1):DG(G19) DG(H2):DC(G18) DT(H3):DA(G17) DC(H4):DG(G16) DG(H5):DC(G15) DG(H6):DC(G14) DT(H7):DA(G13) DG(H8):DC(G12) DA(H9):DT(G11) DG(H10):DC(G10) DT(H11):DA(G9) DC(H12):DG(G8) DA(H13):DT(G7) DC(H14):DG(G6) DC(H15):DG(G5) DG(H16):DC(G4) DA(H17):DT(G3) DC(H18):DG(G2) chainD ( 14) ASN278 0 0 0 0 0 2 7 7 6 0 0 0 0 0 0 0 0 0 ( 15) ARG279 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 17) ALA281 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 18) ALA282 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 ( 21) CYS285 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG286 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 prot.sequence sqerikaerKrlrNRiAAskCRkrklerisrleekvktlksqntelastasllreqvaqlkqkvlsh >5vpf_B:Leucine_zipper_domain;A_DNA-binding_domain_in_eukaryotic_transcription_factors; title=TRANSCRIPTION FACTOR FOSB/JUND BZIP DOMAIN IN COMPLEX WITH COGNATE DNA, TYPE-II CRYSTAL organism=HOMO SAPIENS DNA sequence DG(E2):DC(F18) DT(E3):DA(F17) DC(E4):DG(F16) DG(E5):DC(F15) DG(E6):DC(F14) DT(E7):DA(F13) DG(E8):DC(F12) DA(E9):DT(F11) DC(E10):DG(F10) DT(E11):DA(F9) DC(E12):DG(F8) DA(E13):DT(F7) DC(E14):DG(F6) DC(E15):DG(F5) DG(E16):DC(F4) DA(E17):DT(F3) DC(E18):DG(F2) DG(E19):DC(F1) chainB ( 13) ASN278 0 0 0 0 0 0 0 0 0 7 10 6 1 0 0 0 0 0 ( 16) ALA281 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 17) ALA282 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 20) CYS285 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 21) ARG286 0 0 0 0 0 0 0 12 8 7 0 0 0 0 0 0 0 0 prot.sequence qerikaerkrlrNriAAskCRkrklerisrleekvktlksqntelastasllreqvaqlkqkvlshv >5vrx_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA PRE-CATALYTIC 8-OXOG:DC EXTENSION COMPLEX WITH DTTP BOUND IN WATSON-CRICK CONFORMATION organism=HOMO SAPIENS DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 39 ( 26) LYS35 0 0 0 0 7 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5vry_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA 8-OXOG:DC EXTENSION WITH DTTP AFTER 20 S organism=HOMO SAPIENS DNA sequence DA(T6):TTP(P101) 8OG(T7):DC(P10) DG(T8):DC(P9) DC(T9):DG(P8) DG(T10):DC(P7) DC(T11):DG(P6) DA(T12):DT(P5) DT(T13):DA(P4) DC(T14):DG(P3) DA(T15):DT(P2) DG(T16):DC(P1) chainA (141) ARG149 2 0 0 0 0 0 0 0 0 0 0 (172) SER180 8 0 0 0 0 0 0 0 0 0 0 (175) ARG183 4 0 0 0 0 0 0 0 0 0 0 (180) SER188 1 0 0 0 0 0 0 0 0 0 0 (182) ASP190 6 0 0 0 0 0 0 0 0 0 0 (184) ASP192 6 0 0 0 0 0 0 0 0 0 0 (226) LYS234 0 0 0 4 0 0 0 0 0 0 0 (263) TYR271 6 9 0 0 0 0 0 0 0 0 0 (268) ASP276 11 0 0 0 0 0 0 0 0 0 0 (271) ASN279 5 0 0 0 0 0 0 0 0 0 0 (272) LYS280 18 0 0 0 0 0 0 0 0 0 0 (275) ARG283 9 4 0 0 0 0 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnKnmRahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5vrz_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA 8-OXOG:DC EXTENSION WITH DTTP AFTER 60 S organism=HOMO SAPIENS DNA sequence DC(P1):DG(T16) DT(P2):DA(T15) DG(P3):DC(T14) DA(P4):DT(T13) DT(P5):DA(T12) DG(P6):DC(T11) DC(P7):DG(T10) DG(P8):DC(T9) DC(P9):DG(T8) DC(P10):8OG(T7) DT(P11):DA(T6) chainA (225) LYS234 0 0 0 0 0 0 0 2 0 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 9 6 (267) ASP276 0 0 0 0 0 0 0 0 0 0 12 (270) ASN279 0 0 0 0 0 0 0 0 0 0 5 (271) LYS280 0 0 0 0 0 0 0 0 0 0 16 (274) ARG283 0 0 0 0 0 0 0 0 0 4 10 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNKnmRahalekgftineytirplvageplpvdsekdifdyiqwkyrepkdrse >5vs0_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA 8-OXOG:DC EXTENSION WITH DTTP AFTER 80 S organism=Homo sapiens DNA sequence DA(T6):DT(P11) 8OG(T7):DC(P10) DG(T8):DC(P9) DC(T9):DG(P8) DG(T10):DC(P7) DC(T11):DG(P6) DA(T12):DT(P5) DT(T13):DA(P4) DC(T14):DG(P3) DA(T15):DT(P2) DG(T16):DC(P1) chainA (225) LYS234 0 0 0 3 0 0 0 0 0 0 0 (262) TYR271 8 9 0 0 0 0 0 0 0 0 0 (267) ASP276 12 0 0 0 0 0 0 0 0 0 0 (270) ASN279 5 0 0 0 0 0 0 0 0 0 0 (271) LYS280 16 0 0 0 0 0 0 0 0 0 0 (274) ARG283 10 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNKnmRahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5vs1_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA PRE-CATALYTIC 8-OXOG:DA EXTENSION COMPLEX WITH DTTP BOUND IN NON-PLANAR CONFORMATION organism=Homo sapiens DNA sequence DA(T6):TTP(P103) 8OG(T7):DA(P10) DG(T8):DC(P9) DC(T9):DG(P8) DG(T10):DC(P7) DC(T11):DG(P6) DA(T12):DT(P5) DT(T13):DA(P4) DC(T14):DG(P3) DA(T15):DT(P2) DG(T16):DC(P1) chainA (140) ARG149 3 0 0 0 0 0 0 0 0 0 0 (171) SER180 7 0 0 0 0 0 0 0 0 0 0 (174) ARG183 4 0 0 0 0 0 0 0 0 0 0 (179) SER188 1 0 0 0 0 0 0 0 0 0 0 (181) ASP190 5 0 0 0 0 0 0 0 0 0 0 (183) ASP192 4 0 0 0 0 0 0 0 0 0 0 (225) LYS234 0 0 0 2 0 0 0 0 0 0 0 (262) TYR271 17 8 0 0 0 0 0 0 0 0 0 (267) ASP276 10 0 0 0 0 0 0 0 0 0 0 (270) ASN279 7 0 0 0 0 0 0 0 0 0 0 (271) LYS280 13 0 0 0 0 0 0 0 0 0 0 (274) ARG283 10 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnKnmRahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5vs2_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA PRE-CATALYTIC 8-OXOG:DA EXTENSION COMPLEX WITH DTTP BOUND IN WATSON-CRICK CONFORMATION organism=Homo sapiens DNA sequence DA(T6):TTP(A401) 8OG(T7):DA(P10) DG(T8):DC(P9) DC(T9):DG(P8) DG(T10):DC(P7) DC(T11):DG(P6) DA(T12):DT(P5) DT(T13):DA(P4) DC(T14):DG(P3) DA(T15):DT(P2) DG(T16):DC(P1) chainA (142) ARG149 1 0 0 0 0 0 0 0 0 0 0 (173) SER180 8 0 0 0 0 0 0 0 0 0 0 (176) ARG183 5 0 0 0 0 0 0 0 0 0 0 (181) SER188 2 0 0 0 0 0 0 0 0 0 0 (183) ASP190 6 0 0 0 0 0 0 0 0 0 0 (185) ASP192 5 0 0 0 0 0 0 0 0 0 0 (227) LYS234 0 0 0 2 0 0 0 0 0 0 0 (264) TYR271 5 8 0 0 0 0 0 0 0 0 0 (269) ASP276 12 0 0 0 0 0 0 0 0 0 0 (272) ASN279 5 0 0 0 0 0 0 0 0 0 0 (273) LYS280 20 0 0 0 0 0 0 0 0 0 0 (276) ARG283 7 3 0 0 0 0 0 0 0 0 0 prot.sequence qetlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnKnmRahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5vs3_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA 8-OXOG:DA EXTENSION WITH DTTP AFTER 90 S organism=HOMO SAPIENS DNA sequence DC(P1):DG(T16) DT(P2):DA(T15) DG(P3):DC(T14) DA(P4):DT(T13) DT(P5):DA(T12) DG(P6):DC(T11) DC(P7):DG(T10) DG(P8):DC(T9) DC(P9):DG(T8) DA(P10):8OG(T7) DT(P11):DA(T6) chainA (225) LYS234 0 0 0 0 0 0 0 5 0 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 8 6 (267) ASP276 0 0 0 0 0 0 0 0 0 0 9 (270) ASN279 0 0 0 0 0 0 0 0 0 0 5 (271) LYS280 0 0 0 0 0 0 0 0 0 0 16 (274) ARG283 0 0 0 0 0 0 0 0 0 3 9 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNKnmRahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5vs4_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA 8-OXOG:DA EXTENSION WITH DTTP AFTER 120 S organism=Homo sapiens DNA sequence DC(P1):DG(T16) DT(P2):DA(T15) DG(P3):DC(T14) DA(P4):DT(T13) DT(P5):DA(T12) DG(P6):DC(T11) DC(P7):DG(T10) DG(P8):DC(T9) DC(P9):DG(T8) DA(P10):8OG(T7) DT(P11):DA(T6) chainA (226) LYS234 0 0 0 0 0 0 0 4 0 0 0 (263) TYR271 0 0 0 0 0 0 0 0 0 8 6 (268) ASP276 0 0 0 0 0 0 0 0 0 0 12 (271) ASN279 0 0 0 0 0 0 0 0 0 0 5 (272) LYS280 0 0 0 0 0 0 0 0 0 0 15 (275) ARG283 0 0 0 0 0 0 0 0 0 3 8 prot.sequence etlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNKnmRahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5vu6_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TNA POLYMERASE BINARY COMPLEX WITH PRIMER/TEMPLATE DUPLEX organism=Thermococcus kodakarensis DNA sequence DC(P1):DG(T16) DG(P2):DC(T15) DC(P3):DG(T14) DG(P4):DC(T13) DA(P5):DT(T12) DA(P6):DT(T11) DC(P7):DG(T10) DT(P8):DA(T9) DG(P9):DC(T8) DC(P10):DG(T7) DG(P11):DC(T6) chainA (592) LYS592 0 0 0 0 0 0 0 0 0 7 6 (612) ARG612 0 0 0 0 0 0 0 4 8 1 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqrrikilansyygyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklvihiqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdptkhkydaeyyienqvlpaverilrafgyrkedlr >5vu7_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TNA POLYMERASE, OPEN TERNARY COMPLEX organism=Thermococcus kodakarensis DNA sequence DC(T6):DG(P11) DG(T7):DC(P10) DC(T8):DG(P9) DA(T9):DT(P8) DG(T10):DC(P7) DT(T11):DA(P6) DT(T12):DA(P5) DC(T13):DG(P4) DG(T14):DC(P3) DC(T15):DG(P2) chainA (592) LYS592 9 7 0 0 0 0 0 0 0 0 (612) ARG612 0 0 7 3 0 0 0 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqrrikilansyygyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklvihiqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdptkhkydaeyyienqvlpaverilrafgyrkedlr >5vu8_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TNA POLYMERASE, CLOSED TERNARY COMPLEX organism=Thermococcus kodakarensis DNA sequence DC(T6):DG(P11) DG(T7):DC(P10) DC(T8):DG(P9) DA(T9):DT(P8) DG(T10):DC(P7) DT(T11):DA(P6) DT(T12):DA(P5) DC(T13):DG(P4) DG(T14):DC(P3) DC(T15):DG(P2) DG(T16):DC(P1) chainA (592) LYS592 8 12 0 0 0 0 0 0 0 0 0 (612) ARG612 0 0 4 4 0 0 0 0 0 0 0 (614) ASP614 0 0 0 1 0 0 0 0 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqrrikilansyygyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittrgleivRrDwseiaketqarvleallkdgdvekavrivkevteklskyevppklvihiqitrdlkdykatgphvavakrlaagvkirpgtvisyivlkgsgrigdraipfdefdptkhkydaeyyienqvlpaverilrafgyrkedlryqk >5vu9_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TNA POLYMERASE, TRANSLOCATED PRODUCT organism=Thermococcus kodakarensis DNA sequence DC(P1):DG(T16) DG(P2):DC(T15) DC(P3):DG(T14) DG(P4):DC(T13) DA(P5):DT(T12) DA(P6):DT(T11) DC(P7):DG(T10) DT(P8):DA(T9) DG(P9):DC(T8) DC(P10):DG(T7) DG(P11):DC(T6) chainA (592) LYS592 0 0 0 0 0 0 0 0 0 0 9 (612) ARG612 0 0 0 0 0 0 0 0 8 7 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqrrikilansyygyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklvihiqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdptkhkydaeyyienqvlpaverilrafgyrkedlry >5vvj_A: title=CAS1-CAS2 BOUND TO HALF-SITE INTERMEDIATE organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(G1):DT(H23) DA(G2):DT(H22) DA(G3):DT(H21) DC(G4):DG(H20) DA(G5):DT(H19) DC(G6):DG(H18) DC(G7):DG(H17) DA(G8):DT(H16) DG(G9):DC(H15) DA(G10):DT(H14) DA(G11):DT(H13) DC(G12):DG(H12) DG(G13):DC(H11) DA(G14):DT(H10) DG(G15):DC(H9) DT(G16):DA(H8) DA(G17):DT(H7) DG(G18):DC(H6) DT(G19):DA(H5) DA(G20):DT(H4) DA(G21):DT(H3) DA(G22):DT(H2) DT(G23):DA(H1) chainA ( 7) TYR22 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS37 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PRO56 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) GLU80 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smiflqYgqidvidgafvlidKtgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqpp >5vvj_ABCDEF: title=CAS1-CAS2 BOUND TO HALF-SITE INTERMEDIATE organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(G1):DT(H23) DA(G2):DT(H22) DA(G3):DT(H21) DC(G4):DG(H20) DA(G5):DT(H19) DC(G6):DG(H18) DC(G7):DG(H17) DA(G8):DT(H16) DG(G9):DC(H15) DA(G10):DT(H14) DA(G11):DT(H13) DC(G12):DG(H12) DG(G13):DC(H11) DA(G14):DT(H10) DG(G15):DC(H9) DT(G16):DA(H8) DA(G17):DT(H7) DG(G18):DC(H6) DT(G19):DA(H5) DA(G20):DT(H4) DA(G21):DT(H3) DA(G22):DT(H2) DT(G23):DA(H1) chainA ( 7) TYR22 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS37 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PRO56 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) GLU80 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 7) TYR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 ( 22) LYS37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 41) PRO56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainD chainE chainF prot.sequence smiflqYgqidvidgafvlidKtgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgEagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqpp/twlplnPiplkdrvsmiflqyGqidvidgafvlidktgirThipvgsvacimlepgtrvshaavRlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaag/smiflqYgqidvidgafvlidKtgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngydptinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaagei/lplnpiPlkdrvsmiflqygqIdvidgafvlidktgirthIpvgsvacimlepgtrvshaavrlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydptinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaag/smlvvvTenvpprlrgrlaiwLlevragvyvgdvsakireMiweqiaglaeegnvvmawatntetgfefqtfglnrrtpvdldglrlvsflpv/msmlvvVtenvpprlrgrlaiWllevragvyvgdvsakirEmiweqiaglaeegnvvmawatntetgfefqtfglnrrtpvdldglrlvsflpvg >5vvr_ABEM:P-loop_containing_nucleoside_triphosphate_hydrolases; title=TERNARY COMPLEX OF RNA POL II, TRANSCRIPTION SCAFFOLD AND RAD26 organism=? DNA sequence DC(N1):DG(T47) DT(N2):DA(T46) DA(N3):DT(T45) DG(N4):DC(T44) DT(N5):DA(T43) DT(N6):DA(T42) DG(N7):DC(T41) DA(N8):DT(T40) DT(N9):DA(T39) DC(N10):DG(T38) DT(N11):DA(T37) DC(N12):DG(T36) DT(N14):DT(T35) DA(N15):DA(T34) DT(N16):DT(T33) DT(N17):DC(T32) DT(N18):DG(T31) DC(N19):DG(T30) DA(N20):DT(T29) DT(N21):DA(T28) DT(N22):DG(T27) DC(N23):DC(T26) DC(N24):DT(T25) DT(N25):DC(T24) DA(N26):DT(T23) DC(N27):DC(T22) DT(N28):DC(T21) DC(N29):DT(T20) DA(N30):DA(T19) DG(N31):DC(T18) DG(N32):DC(T17) DA(N33):DT(T15) DG(N34):DC(T14) DA(N35):DT(T13) DA(N36):DT(T12) DG(N37):DC(T11) DG(N38):DC(T10) DA(N39):DT(T9) DG(N40):DC(T8) DC(N41):DG(T7) DA(N42):DT(T6) DG(N43):DC(T5) DA(N44):DT(T4) DG(N45):DC(T3) DC(N46):DG(T2) DG(N47):DC(T1) chainA (246) ASN253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) SER255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) GLN256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) PRO448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (824) THR831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (825) ALA832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1379) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (487) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (848) LYS865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (849) TYR866 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (907) GLU924 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainM (195) ASN476 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) LYS613 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) ARG614 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) ASN615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) LEU617 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) PHE618 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) ASP621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) ARG731 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) ASP751 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (458) TRP752 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (497) ARG791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence saplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfNeSQrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymp/fedesapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhttesdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidvpgrelkyeliaeeseddsesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveeahdfnmklainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigRdgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdieggfedveeytwssllneglveyidaeeeesiliamqpedlepaeaneendldvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekKYgmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpispdeeElgqrtayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm/lrfrgqpgeakddgdelyyqerlkkwvkqrscgsqrssdlpewrrphpnipdaklnsqfkipgeiysllfnyqktcvqwlyelyqqncggiigdemglgktiqviafiaalhhsglltgpvlivcpatvmkqwcnefqhwwpplrtvilhsmgsgmasdqhilittyvglrihsdkllkvkwqyavldeghkirNpdseisltckklkthnriilsgtpiqnnltelwslfdfifpgklgtlpvfqqqfvipiniggyanatniqvqtgykcavalrdlispyllrrvkadvakdlpqkkemvlfckltkyqrskyleflhssdlnqiqngKRNvLFgiDilrkicnhpdgdpkrsgkmqvvkqllllwhkqgykallftqsrqmldileefistkdpdlshlnylrmdgttnikgrqslvdrfnnesfdvfllttRvgglgvnltganriiifdpDWnpstdmqarerawrigqkrevsiyrlmvggsieekiyhRqifkqf >5vvr_M:P-loop_containing_nucleoside_triphosphate_hydrolases; title=TERNARY COMPLEX OF RNA POL II, TRANSCRIPTION SCAFFOLD AND RAD26 organism=? DNA sequence DC(N1):DG(T47) DT(N2):DA(T46) DA(N3):DT(T45) DG(N4):DC(T44) DT(N5):DA(T43) DT(N6):DA(T42) DG(N7):DC(T41) DA(N8):DT(T40) DT(N9):DA(T39) DC(N10):DG(T38) DT(N11):DA(T37) DC(N12):DG(T36) DT(N14):DT(T35) DA(N15):DA(T34) DT(N16):DT(T33) DT(N17):DC(T32) DT(N18):DG(T31) DC(N19):DG(T30) DA(N20):DT(T29) DT(N21):DA(T28) DT(N22):DG(T27) DC(N23):DC(T26) DC(N24):DT(T25) DT(N25):DC(T24) DA(N26):DT(T23) DC(N27):DC(T22) DT(N28):DC(T21) DC(N29):DT(T20) DA(N30):DA(T19) DG(N31):DC(T18) DG(N32):DC(T17) DA(N33):DT(T15) DG(N34):DC(T14) DA(N35):DT(T13) DA(N36):DT(T12) DG(N37):DC(T11) DG(N38):DC(T10) DA(N39):DT(T9) DG(N40):DC(T8) DC(N41):DG(T7) DA(N42):DT(T6) DG(N43):DC(T5) DA(N44):DT(T4) DG(N45):DC(T3) DC(N46):DG(T2) DG(N47):DC(T1) chainM (195) ASN476 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) LYS613 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) ARG614 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) ASN615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) LEU617 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) PHE618 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) ASP621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) ARG731 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) ASP751 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (458) TRP752 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (497) ARG791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lrfrgqpgeakddgdelyyqerlkkwvkqrscgsqrssdlpewrrphpnipdaklnsqfkipgeiysllfnyqktcvqwlyelyqqncggiigdemglgktiqviafiaalhhsglltgpvlivcpatvmkqwcnefqhwwpplrtvilhsmgsgmasdqhilittyvglrihsdkllkvkwqyavldeghkirNpdseisltckklkthnriilsgtpiqnnltelwslfdfifpgklgtlpvfqqqfvipiniggyanatniqvqtgykcavalrdlispyllrrvkadvakdlpqkkemvlfckltkyqrskyleflhssdlnqiqngKRNvLFgiDilrkicnhpdgdpkrsgkmqvvkqllllwhkqgykallftqsrqmldileefistkdpdlshlnylrmdgttnikgrqslvdrfnnesfdvfllttRvgglgvnltganriiifdpDWnpstdmqarerawrigqkrevsiyrlmvggsieekiyhRqifkqf >5vvs_ABE: title=RNA POL II ELONGATION COMPLEX organism=? DNA sequence DC(T1):DG(N47) DC(T3):DG(N45) DT(T4):DA(N44) DC(T5):DG(N43) DT(T6):DA(N42) DG(T7):DC(N41) DC(T8):DG(N40) DT(T9):DA(N39) DC(T10):DG(N38) DC(T11):DG(N37) DT(T12):DA(N36) DT(T13):DA(N35) DC(T14):DG(N34) DT(T15):DA(N33) DC(T16):DG(N32) DC(T17):DA(N15) DC(T18):DT(N14) DA(T19):DA(N13) DT(T20):DC(N12) DC(T21):DT(N11) DC(T22):DC(N10) chainA (441) PRO448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (824) THR831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 (825) ALA832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 chainB (488) ASP505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 chainE prot.sequence saplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkympeqkitei/fedesapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhttesdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidvpgrelkyeliaeeseddsesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveeahdfnmklainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrDgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdieggfedveeytwssllneglveyidaeeeesiliamqpedlepaeaneendldvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpispdeeelgqrtayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >5vvs_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POL II ELONGATION COMPLEX organism=? DNA sequence DC(N10):DC(T22) DT(N11):DC(T21) DC(N12):DT(T20) DA(N13):DA(T19) DT(N14):DC(T18) DA(N15):DC(T17) DG(N32):DC(T16) DA(N33):DT(T15) DG(N34):DC(T14) DA(N35):DT(T13) DA(N36):DT(T12) DG(N37):DC(T11) DG(N38):DC(T10) DA(N39):DT(T9) DG(N40):DC(T8) DC(N41):DG(T7) DA(N42):DT(T6) DG(N43):DC(T5) DA(N44):DT(T4) DG(N45):DC(T3) DG(N47):DC(T1) chainB (488) ASP505 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fedesapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhttesdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidvpgrelkyeliaeeseddsesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveeahdfnmklainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrDgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdieggfedveeytwssllneglveyidaeeeesiliamqpedlepaeaneendldvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpispdeeelgqrtayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf >5vxn_C:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=STRUCTURE OF TWO RCSB DIMERS BOUND TO TWO PARALLEL DNAS. organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DT(H19):DA(G18) DC(H20):DG(G17) DT(H21):DA(G16) DA(H22):DT(G15) DA(H23):DT(G14) DG(H24):DC(G13) DA(H25):DT(G12) DT(H26):DA(G11) DT(H27):DA(G10) DT(H28):DA(G9) DT(H29):DA(G8) DT(H30):DA(G7) DC(H31):DG(G6) DC(H32):DG(G5) DT(H33):DA(G4) DA(H34):DT(G3) DA(H35):DT(G2) DA(H36):DT(G1) chainC (173) ILE179 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (174) LYS180 0 0 0 0 0 0 0 0 0 0 0 5 10 8 0 0 0 0 (175) THR181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 (177) SER183 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (178) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (179) GLN185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgkkftpesvsrllekisakrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylssvt >5vxn_CD:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=STRUCTURE OF TWO RCSB DIMERS BOUND TO TWO PARALLEL DNAS. organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DT(H19):DA(G18) DC(H20):DG(G17) DT(H21):DA(G16) DA(H22):DT(G15) DA(H23):DT(G14) DG(H24):DC(G13) DA(H25):DT(G12) DT(H26):DA(G11) DT(H27):DA(G10) DT(H28):DA(G9) DT(H29):DA(G8) DT(H30):DA(G7) DC(H31):DG(G6) DC(H32):DG(G5) DT(H33):DA(G4) DA(H34):DT(G3) DA(H35):DT(G2) DA(H36):DT(G1) chainC (173) ILE179 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (174) LYS180 0 0 0 0 0 0 0 0 0 0 0 5 10 8 0 0 0 0 (175) THR181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 (177) SER183 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (178) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (179) GLN185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 chainD (168) ILE179 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (169) LYS180 0 0 0 2 10 14 9 0 0 0 0 0 0 0 0 0 0 0 (170) THR181 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) SER183 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (173) SER184 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) GLN185 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgkkftpesvsrllekisakrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylssvt/nmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgkkesvsrllekidkrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylssv >5vz9_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=POST-CATALYTIC COMPLEX OF HUMAN POLYMERASE MU (G433A) MUTANT WITH INCOMING DTTP organism=HOMO SAPIENS DNA sequence DC(P1):DG(T9) DG(P2):DC(T8) DT(P3):DA(T7) DA(P4):DT(T6) DT(P5):DA(T5) chainA (231) ARG387 0 0 5 1 0 (233) PHE389 0 1 2 0 0 (270) LYS438 0 0 0 0 18 (273) GLN441 0 0 0 0 2 (274) ARG442 0 0 0 0 20 (277) ARG445 0 0 0 4 7 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsegrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqqqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqhfeRsFcifrlpqpgswkavrvdlvvapvsqfpfallawtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >5vzc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=POST-CATALYTIC COMPLEX OF HUMAN POLYMERASE MU (G433S) MUTANT WITH INCOMING DTTP organism=HOMO SAPIENS DNA sequence DA(T5):DT(P5) DT(T6):DA(P4) DA(T7):DT(P3) DC(T8):DG(P2) DG(T9):DC(P1) chainA (231) ARG387 0 1 5 1 0 (233) PHE389 0 0 2 1 0 (270) LYS438 19 0 0 0 0 (273) GLN441 2 0 0 0 0 (274) ARG442 21 0 0 0 0 (277) ARG445 7 4 0 0 0 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsegrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqQqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqhfeRsFcifrlpqpgswkavrvdlvvapvsqfpfallswtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >5vzf_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=POST-CATALYTIC COMPLEX OF HUMAN POLYMERASE MU (W434A) MUTANT WITH INCOMING DTTP organism=Homo sapiens DNA sequence DC(P1):DG(T9) DG(P2):DC(T8) DT(P3):DA(T7) DA(P4):DT(T6) DT(P5):DA(T5) chainA (231) ARG387 0 0 5 1 0 (233) PHE389 0 1 3 0 0 (270) LYS438 0 0 0 0 16 (273) GLN441 0 0 0 0 2 (274) ARG442 0 0 0 0 23 (277) ARG445 0 0 0 3 8 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsegrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqQqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqhfeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgatgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >5vzi_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=POST-CATALYTIC COMPLEX OF HUMAN POLYMERASE MU (W434H) MUTANT WITH INCOMING DTTP organism=Homo sapiens DNA sequence DA(T5):DT(P5) DT(T6):DA(P4) DA(T7):DT(P3) DC(T8):DG(P2) DG(T9):DC(P1) chainA (231) ARG387 0 0 4 0 0 (233) PHE389 0 0 3 2 0 (270) LYS438 19 0 0 0 0 (273) GLN441 2 0 0 0 0 (274) ARG442 21 0 0 0 0 (277) ARG445 7 3 0 0 0 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsegrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqQqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqhfeRsFcifrlpqpgswkavrvdlvvapvsqfpfallghtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >5w0u_B:Periplasmic_binding_protein-like_II;Cytidine_deaminase-like; title=CRYSTAL STRUCTURE OF MBP FUSED ACTIVATION-INDUCED CYTIDINE DEAMINASE (AID) IN COMPLEX WITH DCMP organism=ESCHERICHIA COLI O157:H7, HOMO SAPIENS DNA sequence DG(D1):DC(G12) DT(D2):DA(G11) DT(D3):DA(G10) DC(D4):DG(G9) DA(D5):DT(G8) DA(D6):DT(G7) DG(D7):DC(G6) DG(D8):DC(G5) DC(D9):DG(G4) DC(D10):DG(G3) DA(D11):DT(G2) DG(D12):DC(G1) chainB (385) ARG1019 0 0 0 0 0 0 0 1 8 8 0 0 (386) TRP1020 0 0 0 0 0 7 3 0 0 0 0 0 prot.sequence ieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaaaefmdpatftyqfknvRWakgrretylcyvvkrsesldfgylrnkngchvallflryisdwdldpgrcyrvtwftswspcydcarhvadflrgnpnlslriftarlyfcedrkaepeglrrlaeagvqiaimtykdyeycwntfvenhertfkaweglhensvrlsrqlrrilq >5w1c_B:Periplasmic_binding_protein-like_II;Cytidine_deaminase-like; title=CRYSTAL STRUCTURE OF MBP FUSED ACTIVATION-INDUCED CYTIDINE DEAMINASE (AID) IN COMPLEX WITH CYTIDINE organism=ESCHERICHIA COLI O157:H7, HOMO SAPIENS DNA sequence DG(D1):DC(G12) DT(D2):DA(G11) DT(D3):DA(G10) DC(D4):DG(G9) DA(D5):DT(G8) DA(D6):DT(G7) DG(D7):DC(G6) DG(D8):DC(G5) DC(D9):DG(G4) DC(D10):DG(G3) DA(D11):DT(G2) DG(D12):DC(G1) chainB (386) ARG1019 0 0 0 0 0 0 0 0 1 7 0 0 (387) TRP1020 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpdkafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyengkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtskvnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdealkdaqtnaaaefmdpatftyqfknvRWakgrretylcyvvkrsesldfgylrnkngchvallflryisdwdldpgrcyrvtwftswspcydcarhvadflrgnpnlslriftarlyfcedrkaepeglrrlaeagvqiaimtykdyeycwntfvenhertfkaweglhensvrlsrqlrrilq >5w2a_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF HUMAN DNA POLYMERASE KAPPA IN COMPLEX WITH LUCIDIN- DERIVED DNA ADDUCT AND INCOMING DCMPNPP organism=Homo sapiens DNA sequence DC(T6):DG(P13) DT(T7):DA(P12) DG(T8):DC(P11) DA(T9):DT(P10) DT(T10):DA(P9) DC(T11):DG(P8) DC(T12):DG(P7) DG(T13):DC(P6) DC(T14):DG(P5) chainB (332) GLU419 0 4 0 0 0 0 0 0 0 (425) ARG512 0 0 2 0 0 0 0 0 0 prot.sequence ldkekinkiimeatkgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsmlstsnyharrfgvraampgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfiknsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthltrdgerksmsvErtfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiklknvnfevktrastvssvvstaeeifaiakellkteidadfphplrlrlmgvRissfpn >5w2c_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF HUMAN DNA POLYMERASE KAPPA IN COMPLEX WITH LUCIDIN- DERIVED DNA ADDUCT AND INCOMING DAMPNPP organism=Homo sapiens DNA sequence DT(D5):DC(C13) DT(D7):DA(C12) DC(D8):DG(C11) DG(D9):DC(C10) DA(D10):DT(C9) DT(D11):DA(C8) DC(D12):DG(C7) DC(D13):DG(C6) DG(D14):DC(C5) chainA (105) MET135 16 0 0 0 0 0 0 0 0 (121) ALA151 1 0 0 0 0 0 0 0 0 (332) GLU419 0 3 0 0 0 0 0 0 0 (372) LYS459 0 1 0 0 0 0 0 0 0 prot.sequence ldkekinkiimeatkgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsMlstsnyharrfgvraAmpgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfiknsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthltrdgerksmsvErtfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiKlknvnfevktrastvssvvstaeeifaiakellkteidadfphplrlrlmgvrissfpn >5w2m_ABC:Cytidine_deaminase-like; title=APOBEC3F CATALYTIC DOMAIN COMPLEX WITH A SINGLE-STRANDED DNA organism=Homo sapiens DNA sequence DT(E901) DT(E902) DT(E903) DT(E904) DT(E905) DT(E906) DT(E907) DT(E908) DT(E909) DT(E910) chainA (144) TYR333 0 5 37 0 0 0 0 0 0 0 (161) PRO350 0 5 0 0 0 0 0 0 0 0 (164) PRO353 0 4 1 0 0 0 0 0 0 0 (168) LEU357 0 0 1 0 0 0 0 0 0 0 (169) LYS358 0 0 4 2 0 0 0 0 0 0 chainB (144) TYR333 0 0 0 0 0 0 35 6 0 0 (148) LYS337 0 0 0 0 0 0 0 5 0 0 (161) PRO350 0 0 0 0 0 0 0 4 0 0 (162) PHE351 0 0 0 0 0 0 0 6 0 0 (164) PRO353 0 0 0 0 0 0 0 4 0 0 (166) LYS355 0 0 0 0 0 3 0 0 0 0 (168) LEU357 0 0 0 0 0 0 1 0 0 0 (169) LYS358 0 0 0 0 0 0 1 0 0 0 (170) TYR359 0 0 0 0 0 8 0 0 0 0 chainC (144) TYR333 0 0 0 0 0 0 0 0 35 0 (163) LYS352 0 0 0 0 0 0 0 0 0 4 (166) LYS355 0 0 0 0 0 0 0 0 0 9 (168) LEU357 0 0 0 0 0 0 0 0 1 0 (169) LYS358 0 0 0 0 0 0 0 0 4 0 (170) TYR359 0 0 0 0 0 0 0 37 0 0 prot.sequence npmeamyphifyfhfknlrkaygrneswlcftmevvkhhspvswkrgvfrnqvdpethchaercflswfcddilspntnyevtwytswspcpecagevaeflarhsnvnltiftarlyyfwdtdyqeglrslsqegasveimgYkdfkycwenfvynddePfkPwkgLKynflfldsklqeile/npmeamyphifyfhfknlrkaygrneswlcftmevvkhhspvswkrgvfrnqvdpethchaercflswfcddilspntnyevtwytswspcpecagevaeflarhsnvnltiftarlyyfwdtdyqeglrslsqegasveimgYkdfKycwenfvynddePFkPwKgLKYnflfldsklqeile/npmeamyphifyfhfknlrkaygrneswlcftmevvkhhspvswkrgvfrnqvdpethchaercflswfcddilspntnyevtwytswspcpecagevaeflarhsnvnltiftarlyyfwdtdyqeglrslsqegasveimgYkdfkycwenfvynddepfKpwKgLKYnflfldsklqeile >5w2m_JKL:Cytidine_deaminase-like; title=APOBEC3F CATALYTIC DOMAIN COMPLEX WITH A SINGLE-STRANDED DNA organism=Homo sapiens DNA sequence DT(N901) DT(N902) DT(N903) DT(N904) DT(N905) DT(N906) DT(N907) DT(N908) DT(N909) DT(N910) chainJ (144) TYR333 0 5 37 0 0 0 0 0 0 0 (161) PRO350 0 5 0 0 0 0 0 0 0 0 (164) PRO353 0 4 1 0 0 0 0 0 0 0 (168) LEU357 0 0 1 0 0 0 0 0 0 0 (169) LYS358 0 0 4 2 0 0 0 0 0 0 chainK (144) TYR333 0 0 0 0 0 0 35 6 0 0 (148) LYS337 0 0 0 0 0 0 0 5 0 0 (161) PRO350 0 0 0 0 0 0 0 4 0 0 (162) PHE351 0 0 0 0 0 0 0 6 0 0 (164) PRO353 0 0 0 0 0 0 0 4 0 0 (166) LYS355 0 0 0 0 0 3 0 0 0 0 (168) LEU357 0 0 0 0 0 0 1 0 0 0 (169) LYS358 0 0 0 0 0 0 1 0 0 0 (170) TYR359 0 0 0 0 0 10 0 0 0 0 chainL (144) TYR333 0 0 0 0 0 0 0 0 34 0 (163) LYS352 0 0 0 0 0 0 0 0 0 3 (166) LYS355 0 0 0 0 0 0 0 0 0 9 (168) LEU357 0 0 0 0 0 0 0 0 1 0 (169) LYS358 0 0 0 0 0 0 0 0 4 0 (170) TYR359 0 0 0 0 0 0 0 37 0 0 prot.sequence npmeamyphifyfhfknlrkaygrneswlcftmevvkhhspvswkrgvfrnqvdpethchaercflswfcddilspntnyevtwytswspcpecagevaeflarhsnvnltiftarlyyfwdtdyqeglrslsqegasveimgYkdfkycwenfvynddePfkPwkgLKynflfldsklqeile/npmeamyphifyfhfknlrkaygrneswlcftmevvkhhspvswkrgvfrnqvdpethchaercflswfcddilspntnyevtwytswspcpecagevaeflarhsnvnltiftarlyyfwdtdyqeglrslsqegasveimgYkdfKycwenfvynddePFkPwKgLKYnflfldsklqeile/npmeamyphifyfhfknlrkaygrneswlcftmevvkhhspvswkrgvfrnqvdpethchaercflswfcddilspntnyevtwytswspcpecagevaeflarhsnvnltiftarlyyfwdtdyqeglrslsqegasveimgYkdfkycwenfvynddepfKpwKgLKYnflfldsklqeile >5w43_AB:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=STRUCTURE OF THE TWO-COMPONENT RESPONSE REGULATOR RCSB-DNA COMPLEX organism=Escherichia coli str. K-12 substr. MG1655 DNA sequence DT(F23):DA(E22) DA(F24):DT(E21) DT(F25):DA(E20) DC(F26):DG(E19) DT(F27):DA(E18) DA(F28):DT(E17) DA(F29):DT(E16) DG(F30):DC(E15) DA(F31):DT(E14) DT(F32):DA(E13) DT(F33):DA(E12) DT(F34):DA(E11) DT(F35):DA(E10) DT(F36):DA(E9) DC(F37):DG(E8) DC(F38):DG(E7) DT(F39):DA(E6) DA(F40):DT(E5) DA(F41):DT(E4) DA(F42):DT(E3) DT(F43):DA(E2) DC(F44):DG(E1) chainA (172) ILE179 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 (173) LYS180 0 0 0 0 0 0 0 0 0 0 0 0 0 7 18 13 0 0 0 0 0 0 (174) THR181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 (176) SER183 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (177) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 0 0 0 0 (178) GLN185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 chainB (166) ILE179 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (167) LYS180 0 0 0 0 0 2 11 15 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) THR181 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) SER183 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) SER184 0 0 0 0 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) GLN185 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgkkftpesvsrllekidkrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylssvt/nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkpesvsrllekikrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylss >5w43_B:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=STRUCTURE OF THE TWO-COMPONENT RESPONSE REGULATOR RCSB-DNA COMPLEX organism=Escherichia coli str. K-12 substr. MG1655 DNA sequence DG(E1):DC(F44) DA(E2):DT(F43) DT(E3):DA(F42) DT(E4):DA(F41) DT(E5):DA(F40) DA(E6):DT(F39) DG(E7):DC(F38) DG(E8):DC(F37) DA(E9):DT(F36) DA(E10):DT(F35) DA(E11):DT(F34) DA(E12):DT(F33) DA(E13):DT(F32) DT(E14):DA(F31) DC(E15):DG(F30) DT(E16):DA(F29) DT(E17):DA(F28) DA(E18):DT(F27) DG(E19):DC(F26) DA(E20):DT(F25) DT(E21):DA(F24) DA(E22):DT(F23) chainB (166) ILE179 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (167) LYS180 0 0 0 0 0 0 0 0 0 0 0 0 0 6 15 11 2 0 0 0 0 0 (168) THR181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 (170) SER183 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (171) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 3 0 0 0 0 (172) GLN185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkpesvsrllekikrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylss >5w51_AE: title=POL II ELONGATION COMPLEX WITH AN N6-METHYLADENINE-CONTAINING TEMPLATE AND A MATCHED UMPNPP organism=? DNA sequence DC(N1):DG(T14) DT(N2):DA(T13) DG(N3):DC(T12) DC(N4):DG(T11) DT(N5):DA(T10) DT(N6):DA(T9) DA(N7):DT(T8) DT(N8):DG(T6) DC(N9):DC(T5) DG(N10):DC(T4) DG(N11):DA(T3) DT(N12):DT(T2) DA(N13):DC(T1) chainA (1309) HIS1387 4 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvccgntqptirkdglklvgswvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrHgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmidees/qenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >5w5y_ABPQ: title=RNA POLYMERASE I INITIAL TRANSCRIBING COMPLEX organism=? DNA sequence DC(T10):DA(S54) DT(T11):DC(S53) DG(T12):DA(S52) DC(T13):DG(S51) DT(T14):DA(S50) DT(T15):DA(S49) DT(T16):DG(S48) DC(T17):DT(S47) DG(T18):DT(S46) DC(T19):DG(S45) DA(T20):DA(S44) DT(T21):DC(S43) DG(T22):DG(S42) DA(T23):DT(S41) DA(T24):DT(S40) DG(T25):DT(S39) DT(T26):DT(S29) DA(T27):DT(S28) DC(T28):DT(S27) DC(T29):DT(S26) DT(T30):DT(S25) DC(T31):DG(S24) DC(T32):DG(S23) DC(T33):DG(S22) DA(T34):DT(S21) DA(T35):DT(S20) DC(T36):DG(S19) DT(T37):DA(S18) DA(T38):DT(S17) DC(T39):DG(S16) DT(T40):DA(S15) DT(T41):DA(S14) DT(T42):DA(S13) DT(T43):DA(S12) DC(T44):DG(S11) DC(T45):DG(S10) DT(T46):DA(S9) DC(T47):DG(S8) DA(T48):DT(S7) DC(T49):DG(S6) DA(T50):DT(S5) DC(T51):DG(S4) DT(T52):DA(S3) DT(T53):DA(S2) DG(T54):DC(S1) chainA (403) ARG481 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (514) GLN592 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (935) THR1013 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (936) SER1014 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (940) TYR1018 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1398) ARG1600 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1414) GLU1616 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (447) TYR463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (463) GLN479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (464) GLN480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) PHE508 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) GLN511 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (496) LEU512 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (801) ARG817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP (121) ILE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (201) HIS294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 6 0 0 0 0 0 chainQ ( 10) ASN10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 8 0 0 0 0 0 0 0 0 0 0 (204) ILE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitldisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevhensqnqllskvlttsllirdlnddlsklqkdkvsledrrvifsrlmnafvtiqndvnafidstkaqkvpipgvkqalekkeglfrkhmmgkrvnyaaRsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQptlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgYlqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhsphykqsvkydpvlakynpakylgsvsenfqdklesfldknsklfkssdgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettaarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqknmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyEttcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsnsgylgnklsvsveqvsiakpmsndgvssaverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvnenigskmqYflstgnlvsqsgldlQQvsgytvvaekinfyrfishfrmvhrgsFfaQLktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnRgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakklltedgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirl/kligheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklqlhmtstisilylasthlslpvytcdyikwictakmpyfqaseilpkswriqlpnyyvsIlegsispfngqlynkialtcgmihfkeffnseiscqglllklvmqcalppefyfytkqviefeetdirnltlwertderHtgrvsnhaelrvlsyfmltinwmlsfdrdrqyplkwilsltesltqrtttsesigrnivkvvypdkptssdyfqwseeetleflkwmekqflptqtsmemtidqkiarrklykifpldredthqltfiedlqeryakqtpffpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhr/mfevpitltNRkfaqrrklkyqyinyisrrfdrisksdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrfvqnInyrsivppfqtgsrthtakfaitylwsslincqksmeptendllqelidkisewvltppfmedaevwfiyaschllkadtlsrqfvndnknndligldrdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrly >5w5y_P: title=RNA POLYMERASE I INITIAL TRANSCRIBING COMPLEX organism=? DNA sequence DC(S1):DG(T54) DA(S2):DT(T53) DA(S3):DT(T52) DG(S4):DC(T51) DT(S5):DA(T50) DG(S6):DC(T49) DT(S7):DA(T48) DG(S8):DC(T47) DA(S9):DT(T46) DG(S10):DC(T45) DG(S11):DC(T44) DA(S12):DT(T43) DA(S13):DT(T42) DA(S14):DT(T41) DA(S15):DT(T40) DG(S16):DC(T39) DT(S17):DA(T38) DA(S18):DT(T37) DG(S19):DC(T36) DT(S20):DA(T35) DT(S21):DA(T34) DG(S22):DC(T33) DG(S23):DC(T32) DG(S24):DC(T31) DT(S25):DT(T30) DT(S26):DC(T29) DT(S27):DC(T28) DT(S28):DA(T27) DT(S29):DT(T26) DT(S39):DG(T25) DT(S40):DA(T24) DT(S41):DA(T23) DG(S42):DG(T22) DC(S43):DT(T21) DA(S44):DA(T20) DG(S45):DC(T19) DT(S46):DG(T18) DT(S47):DC(T17) DG(S48):DT(T16) DA(S49):DT(T15) DA(S50):DT(T14) DG(S51):DC(T13) DA(S52):DG(T12) DC(S53):DT(T11) DA(S54):DC(T10) chainP (121) ILE214 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) HIS294 0 0 0 0 0 6 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kligheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklqlhmtstisilylasthlslpvytcdyikwictakmpyfqaseilpkswriqlpnyyvsIlegsispfngqlynkialtcgmihfkeffnseiscqglllklvmqcalppefyfytkqviefeetdirnltlwertderHtgrvsnhaelrvlsyfmltinwmlsfdrdrqyplkwilsltesltqrtttsesigrnivkvvypdkptssdyfqwseeetleflkwmekqflptqtsmemtidqkiarrklykifpldredthqltfiedlqeryakqtpffpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhr >5w5y_Q: title=RNA POLYMERASE I INITIAL TRANSCRIBING COMPLEX organism=? DNA sequence DC(T10):DA(S54) DT(T11):DC(S53) DG(T12):DA(S52) DC(T13):DG(S51) DT(T14):DA(S50) DT(T15):DA(S49) DT(T16):DG(S48) DC(T17):DT(S47) DG(T18):DT(S46) DC(T19):DG(S45) DA(T20):DA(S44) DT(T21):DC(S43) DG(T22):DG(S42) DA(T23):DT(S41) DA(T24):DT(S40) DG(T25):DT(S39) DT(T26):DT(S29) DA(T27):DT(S28) DC(T28):DT(S27) DC(T29):DT(S26) DT(T30):DT(S25) DC(T31):DG(S24) DC(T32):DG(S23) DC(T33):DG(S22) DA(T34):DT(S21) DA(T35):DT(S20) DC(T36):DG(S19) DT(T37):DA(S18) DA(T38):DT(S17) DC(T39):DG(S16) DT(T40):DA(S15) DT(T41):DA(S14) DT(T42):DA(S13) DT(T43):DA(S12) DC(T44):DG(S11) DC(T45):DG(S10) DT(T46):DA(S9) DC(T47):DG(S8) DA(T48):DT(S7) DC(T49):DG(S6) DA(T50):DT(S5) DC(T51):DG(S4) DT(T52):DA(S3) DT(T53):DA(S2) DG(T54):DC(S1) chainQ ( 10) ASN10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 8 0 0 0 0 0 0 0 0 0 0 (204) ILE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mfevpitltNRkfaqrrklkyqyinyisrrfdrisksdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrfvqnInyrsivppfqtgsrthtakfaitylwsslincqksmeptendllqelidkisewvltppfmedaevwfiyaschllkadtlsrqfvndnknndligldrdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrly >5w64_ABPQ: title=RNA POLYMERASE I INITIAL TRANSCRIBING COMPLEX STATE 1 organism=? DNA sequence DC(T13):DA(S54) DT(T14):DC(S53) DT(T15):DA(S52) DT(T16):DG(S51) DC(T17):DA(S50) DG(T18):DA(S49) DC(T19):DG(S48) DA(T20):DT(S47) DT(T21):DT(S46) DG(T22):DG(S45) DA(T23):DA(S44) DA(T24):DC(S43) DG(T25):DG(S42) DT(T26):DT(S41) DA(T27):DT(S28) DC(T28):DT(S27) DC(T29):DT(S26) DT(T30):DT(S25) DC(T31):DG(S24) DC(T32):DG(S23) DC(T33):DG(S22) DA(T34):DT(S21) DA(T35):DT(S20) DC(T36):DG(S19) DT(T37):DA(S18) DA(T38):DT(S17) DC(T39):DG(S16) DT(T40):DA(S15) DT(T41):DA(S14) DT(T42):DA(S13) DT(T43):DA(S12) DC(T44):DG(S11) DC(T45):DG(S10) DT(T46):DA(S9) DC(T47):DG(S8) DA(T48):DT(S7) DC(T49):DG(S6) DA(T50):DT(S5) DC(T51):DG(S4) DT(T52):DA(S3) DT(T53):DA(S2) DG(T54):DC(S1) chainA (403) ARG481 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (514) GLN592 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (935) THR1013 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (936) SER1014 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (940) TYR1018 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (438) ASN454 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) ASN456 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) ILE457 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) SER459 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) TYR463 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) PHE464 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (451) THR467 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (453) ASN469 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) PHE508 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) GLN511 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (801) ARG817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1027) LYS1043 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1048) LYS1064 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP (117) TYR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 2 0 0 0 0 0 0 0 0 0 0 0 (121) ILE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (201) HIS294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57 12 0 0 0 0 0 (202) THR295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 chainQ ( 10) ASN10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (204) ILE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitldisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevhensqnqllskvlttsllirdlnddlsklqkdkvsledrrvifsrlmnafvtiqndvnafidstkaqkvpipgvkqalekkeglfrkhmmgkrvnyaaRsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQptlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgYlqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhsphykqsvkydpvlakynpakylgsvsenfqdklesfldknsklfkssdgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettaarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqknmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnrqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsnsgylgnklsvsveqvsiakpmsndgvssaverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvNeNIgSKmqYFlsTgNlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgsFfaQlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnRgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndKfqvrstgpvnsltmqpvkgrKrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakklltedgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirl/kligheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklqlhmtstisilylasthlslpvytcdyikwictakmpyfqaseilpkswriqlpnYyvsIlegsispfngqlynkialtcgmihfkeffnseiscqglllklvmqcalppefyfytkqviefeetdirnltlwertderHTgrvsnhaelrvlsyfmltinwmlsfdrdrqyplkwilsltesltqrtttsesigrnivkvvypdkptssdyfqwseeetleflkwmekqflptqtsmemtidqkiarrklykifpldredthqltfiedlqeryakqtpffpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhr/mfevpitltNRkfaqrrklkyqyinyisrrfdrisksdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrfvqnInyrsivppfqtgsrthtakfaitylwsslincqksmeptendllqelidkisewvltppfmedaevwfiyaschllkadtlsrqfvndnknndligldrdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrly >5w64_Q: title=RNA POLYMERASE I INITIAL TRANSCRIBING COMPLEX STATE 1 organism=? DNA sequence DC(S1):DG(T54) DA(S2):DT(T53) DA(S3):DT(T52) DG(S4):DC(T51) DT(S5):DA(T50) DG(S6):DC(T49) DT(S7):DA(T48) DG(S8):DC(T47) DA(S9):DT(T46) DG(S10):DC(T45) DG(S11):DC(T44) DA(S12):DT(T43) DA(S13):DT(T42) DA(S14):DT(T41) DA(S15):DT(T40) DG(S16):DC(T39) DT(S17):DA(T38) DA(S18):DT(T37) DG(S19):DC(T36) DT(S20):DA(T35) DT(S21):DA(T34) DG(S22):DC(T33) DG(S23):DC(T32) DG(S24):DC(T31) DT(S25):DT(T30) DT(S26):DC(T29) DT(S27):DC(T28) DT(S28):DA(T27) DT(S41):DT(T26) DG(S42):DG(T25) DC(S43):DA(T24) DA(S44):DA(T23) DG(S45):DG(T22) DT(S46):DT(T21) DT(S47):DA(T20) DG(S48):DC(T19) DA(S49):DG(T18) DA(S50):DC(T17) DG(S51):DT(T16) DA(S52):DT(T15) DC(S53):DT(T14) DA(S54):DC(T13) chainQ ( 10) ASN10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ILE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mfevpitltNRkfaqrrklkyqyinyisrrfdrisksdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrfvqnInyrsivppfqtgsrthtakfaitylwsslincqksmeptendllqelidkisewvltppfmedaevwfiyaschllkadtlsrqfvndnknndligldrdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrly >5w65_ABPQ: title=RNA POLYMERASE I INITIAL TRANSCRIBING COMPLEX STATE 2 organism=? DNA sequence DC(T10):DA(S54) DT(T11):DC(S53) DG(T12):DA(S52) DC(T13):DG(S51) DT(T14):DA(S50) DT(T15):DA(S49) DT(T16):DG(S48) DC(T17):DT(S47) DG(T18):DT(S46) DC(T19):DG(S45) DA(T20):DA(S44) DT(T21):DC(S43) DG(T22):DG(S42) DA(T23):DT(S41) DA(T24):DT(S40) DG(T25):DT(S39) DT(T26):DT(S29) DA(T27):DT(S28) DC(T28):DT(S27) DC(T29):DT(S26) DT(T30):DT(S25) DC(T31):DG(S24) DC(T32):DG(S23) DC(T33):DG(S22) DA(T34):DT(S21) DA(T35):DT(S20) DC(T36):DG(S19) DT(T37):DA(S18) DA(T38):DT(S17) DC(T39):DG(S16) DT(T40):DA(S15) DT(T41):DA(S14) DT(T42):DA(S13) DT(T43):DA(S12) DC(T44):DG(S11) DC(T45):DG(S10) DT(T46):DA(S9) DC(T47):DG(S8) DA(T48):DT(S7) DC(T49):DG(S6) DA(T50):DT(S5) DC(T51):DG(S4) DT(T52):DA(S3) DT(T53):DA(S2) DG(T54):DC(S1) chainA (305) HIS378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (403) ARG481 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (514) GLN592 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (515) PRO593 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (935) THR1013 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (936) SER1014 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (940) TYR1018 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1134) MET1227 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1414) GLU1616 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (463) GLN479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) PHE508 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) GLN511 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (801) ARG817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 46) ASP46 0 0 0 0 0 0 0 0 0 2 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ASN49 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) TYR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (214) ILE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (294) HIS294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 6 0 0 0 0 0 chainQ ( 10) ASN10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 (200) PHE284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ILE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitldisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevHensqnqllskvlttsllirdlnddlsklqkdkvsledrrvifsrlmnafvtiqndvnafidstkaqkvpipgvkqalekkeglfrkhmmgkrvnyaaRsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgYlqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhsphykqsvkydpvlakynpakylgsvsenfqdklesfldknsklfkssdgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmnvtlgiprlreivMtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettaarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqknmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnrqgmetstssfmkmsyEttcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsnsgylgnklsvsveqvsiakpmsndgvssaverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlQqvsgytvvaekinfyrfishfrmvhrgsFfaQlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnRgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakklltedgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirl/mstfirgpicgtdncpsrlwriidgrrtcqyghvmegdvefnddeDdlNglgagvitrrlnlttnatgsfqssqltnsqllqqqqrqshkkfkkligheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklqlhmtstisilylasthlslpvytcdyikwictakmpyfqaseilpkswriqlpnYyvsIlegsispfngqlynkialtcgmihfkeffnseiscqglllklvmqcalppefyfytkqviefeetdirnltlwertderHtgrvsnhaelrvlsyfmltinwmlsfdrdrqyplkwilsltesltqrtttsesigrnivkvvypdkptssdyfqwseeetleflkwmekqflptqtsmemtidqkiarrklykifpldredsthqltfiedlqeryakqtpffpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhr/mfevpitltNRkfaqrrklkyqyinyisrrfdrisksdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrFvqnInyrsivppfqtgsrthtakfaitylwsslincqksmeptendllqelidkisewvltppfmedaevwfiyaschllkadtlsrqfvndnknndligldrdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrly >5w65_Q: title=RNA POLYMERASE I INITIAL TRANSCRIBING COMPLEX STATE 2 organism=? DNA sequence DC(S1):DG(T54) DA(S2):DT(T53) DA(S3):DT(T52) DG(S4):DC(T51) DT(S5):DA(T50) DG(S6):DC(T49) DT(S7):DA(T48) DG(S8):DC(T47) DA(S9):DT(T46) DG(S10):DC(T45) DG(S11):DC(T44) DA(S12):DT(T43) DA(S13):DT(T42) DA(S14):DT(T41) DA(S15):DT(T40) DG(S16):DC(T39) DT(S17):DA(T38) DA(S18):DT(T37) DG(S19):DC(T36) DT(S20):DA(T35) DT(S21):DA(T34) DG(S22):DC(T33) DG(S23):DC(T32) DG(S24):DC(T31) DT(S25):DT(T30) DT(S26):DC(T29) DT(S27):DC(T28) DT(S28):DA(T27) DT(S29):DT(T26) DT(S39):DG(T25) DT(S40):DA(T24) DT(S41):DA(T23) DG(S42):DG(T22) DC(S43):DT(T21) DA(S44):DA(T20) DG(S45):DC(T19) DT(S46):DG(T18) DT(S47):DC(T17) DG(S48):DT(T16) DA(S49):DT(T15) DA(S50):DT(T14) DG(S51):DC(T13) DA(S52):DG(T12) DC(S53):DT(T11) DA(S54):DC(T10) chainQ ( 10) ASN10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) PHE284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ILE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mfevpitltNRkfaqrrklkyqyinyisrrfdrisksdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrFvqnInyrsivppfqtgsrthtakfaitylwsslincqksmeptendllqelidkisewvltppfmedaevwfiyaschllkadtlsrqfvndnknndligldrdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrly >5w66_ABMPQ: title=RNA POLYMERASE I INITIAL TRANSCRIBING COMPLEX STATE 3 organism=? DNA sequence DC(S1):DG(T54) DA(S2):DT(T53) DA(S3):DT(T52) DG(S4):DC(T51) DT(S5):DA(T50) DG(S6):DC(T49) DT(S7):DA(T48) DG(S8):DC(T47) DA(S9):DT(T46) DG(S10):DC(T45) DG(S11):DC(T44) DA(S12):DT(T43) DA(S13):DT(T42) DA(S14):DT(T41) DA(S15):DT(T40) DG(S16):DC(T39) DT(S17):DA(T38) DA(S18):DT(T37) DG(S19):DC(T36) DT(S20):DA(T35) DT(S21):DA(T34) DG(S22):DC(T33) DG(S23):DC(T32) DG(S24):DC(T31) DT(S25):DT(T30) DT(S26):DC(T29) DT(S27):DC(T28) DT(S28):DA(T27) DT(S29):DT(T26) DT(S39):DG(T25) DT(S40):DA(T24) DT(S41):DA(T23) DG(S42):DG(T22) DC(S43):DT(T21) DA(S44):DA(T20) DG(S45):DC(T19) DT(S46):DG(T18) DT(S47):DC(T17) DG(S48):DT(T16) DA(S49):DT(T15) DA(S50):DT(T14) DG(S51):DC(T13) DA(S52):DG(T12) DC(S53):DT(T11) DA(S54):DC(T10) chainA (303) GLU376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) HIS378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (403) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (514) GLN592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (515) PRO593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (935) THR1013 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 (936) SER1014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (940) TYR1018 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (1134) MET1227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (1398) ARG1600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (1414) GLU1616 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainB (463) GLN479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) PHE508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM chainP (121) ILE214 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG293 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) HIS294 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) THR295 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 10) ASN10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ILE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitldisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeEvHensqnqllskvlttsllirdlnddlsklqkdkvsledrrvifsrlmnafvtiqndvnafidstkaqkvpipgvkqalekkeglfrkhmmgkrvnyaaRsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgYlqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhsphykqsvkydpvlakynpakylgsvsenfqdklesfldknsklfkssdgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmnvtlgiprlreivMtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettaarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqknmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyEttcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsnsgylgnklsvsveqvsiakpmsndgvssaverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlQqvsgytvvaekinfyrfishfrmvhrgsFfaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakklltedgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirl/seieiesvqdqpsvavgsffkgfrapsdttfdlykkkksekdefvlhgenerleyegytdsssqasnqyvvglfnpekksiqlykapvlvskvvskssknlrgpkiksksdtrpsalrnalgeafgtkkakkaiadlernridsdkltdsaidivdsvrtaskdlptraqldeitsndrptplanidatdveqiypiesiipkkelqfirvssilkeadkekklelfpyqnnskyvakkldsltqpsqmtklqllyylslllgvyenrrvnnktkllerlnsppeilvdgilsrftvikpgqfgrskdrsyfidpqnedkilcyilaiimhldnfiveitplahelnlkpskvvslfrvlgaivkgatvaqaeafgipkstaasykiatmkvpfkl/kligheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklqlhmtstisilylasthlslpvytcdyikwictakmpyfqaseilpkswriqlpnyyvsIlegsispfngqlynkialtcgmihfkeffnseiscqglllklvmqcalppefyfytkqviefeetdirnltlwertdeRHTgrvsnhaelrvlsyfmltinwmlsfdrdrqyplkwilsltesltqrtttsesigrnivkvvypdkptssdyfqwseeetleflkwmekqflptqtsmemtidqkiarrklykifpldredthqltfiedlqeryakqtpffpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhr/mfevpitltNRkfaqrrklkyqyinyisrrfdrisksdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrfvqnInyrsivppfqtgsrthtakfaitylwsslincqksmeptendllqelidkisewvltppfmedaevwfiyaschllkadtlsrqfvndnknndligldrdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrly >5w6k_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF MUTANT TAQ POLYMERASE INCORPORATING UNNATURAL BASE PAIRS Z:P organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (245) LYS540 0 0 0 0 0 0 0 5 5 0 0 (278) ARG573 0 0 0 0 0 0 0 0 0 0 4 (285) ASN580 0 0 0 0 0 0 0 0 0 1 0 (288) ASN583 0 0 0 0 0 0 0 0 0 8 0 (475) HIS784 0 0 0 0 0 0 0 0 0 0 1 prot.sequence eapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahveatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahaivekilqyreltKlksTyidplpelihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsak >5w6q_G:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURAL BASIS FOR RECOGNITION OF ARTIFICIAL DNA BY AN EVOLVED KLENTAQ VARIANT organism=Thermus aquaticus DNA sequence DG(I206):DC(H111) DC(I207):DG(H110) DG(I208):DC(H109) DC(I209):DG(H108) DC(I210):DG(H107) DG(I211):DC(H106) DT(I212):DA(H105) DG(I213):DC(H104) DG(I214):DC(H103) DT(I215):DA(H102) DC(I216):DG(H101) chainG (247) LYS540 0 0 5 4 0 0 0 0 0 0 0 (252) TYR545 0 1 0 0 0 0 0 0 0 0 0 (280) ARG573 2 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 1 10 2 0 0 0 0 0 0 0 0 (480) HIS784 1 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahveatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahaivekilqyreltKlkstYidplpelihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswlmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsak >5w7g_H: title=AN ENVELOPE OF A FILAMENTOUS HYPERTHERMOPHILIC VIRUS CARRIES LIPIDS IN A HORSESHOE CONFORMATION organism=ACIDIANUS FILAMENTOUS VIRUS 1 DNA sequence DA(q1):DT(r504) DT(q2):DA(r503) DA(q3):DT(r502) DT(q4):DA(r501) DA(q5):DT(r500) DT(q6):DA(r499) DA(q7):DT(r498) DT(q8):DA(r497) DA(q9):DT(r496) DT(q10):DA(r495) DA(q11):DT(r494) DT(q12):DA(r493) DA(q13):DT(r492) DT(q14):DA(r491) DA(q15):DT(r490) DT(q16):DA(r489) DA(q17):DT(r488) DT(q18):DA(r487) DA(q19):DT(r486) DT(q20):DA(r485) DA(q21):DT(r484) DT(q22):DA(r483) DA(q23):DT(r482) DT(q24):DA(r481) DA(q25):DT(r480) DT(q26):DA(r479) DA(q27):DT(r478) DT(q28):DA(r477) DA(q29):DT(r476) DT(q30):DA(r475) DA(q31):DT(r474) DT(q32):DA(r473) DA(q33):DT(r472) DT(q34):DA(r471) DA(q35):DT(r470) DT(q36):DA(r469) DA(q37):DT(r468) DT(q38):DA(r467) DA(q39):DT(r466) DT(q40):DA(r465) DA(q41):DT(r464) DT(q42):DA(r463) DA(q43):DT(r462) DT(q44):DA(r461) DA(q45):DT(r460) DT(q46):DA(r459) DA(q47):DT(r458) DT(q48):DA(r457) DA(q49):DT(r456) DT(q50):DA(r455) DA(q51):DT(r454) DT(q52):DA(r453) DA(q53):DT(r452) DT(q54):DA(r451) DA(q55):DT(r450) DT(q56):DA(r449) DA(q57):DT(r448) DT(q58):DA(r447) DA(q59):DT(r446) DT(q60):DA(r445) DA(q61):DT(r444) DT(q62):DA(r443) DA(q63):DT(r442) DT(q64):DA(r441) DA(q65):DT(r440) DT(q66):DA(r439) DA(q67):DT(r438) DT(q68):DA(r437) DA(q69):DT(r436) DT(q70):DA(r435) DA(q71):DT(r434) DT(q72):DA(r433) DA(q73):DT(r432) DT(q74):DA(r431) DA(q75):DT(r430) DT(q76):DA(r429) DA(q77):DT(r428) DT(q78):DA(r427) DA(q79):DT(r426) DT(q80):DA(r425) DA(q81):DT(r424) DT(q82):DA(r423) DA(q83):DT(r422) DT(q84):DA(r421) DA(q85):DT(r420) DT(q86):DA(r419) DA(q87):DT(r418) DT(q88):DA(r417) DA(q89):DT(r416) DT(q90):DA(r415) DA(q91):DT(r414) DT(q92):DA(r413) DA(q93):DT(r412) DT(q94):DA(r411) DA(q95):DT(r410) DT(q96):DA(r409) DA(q97):DT(r408) DT(q98):DA(r407) DA(q99):DT(r406) DT(q100):DA(r405) DA(q101):DT(r404) DT(q102):DA(r403) DA(q103):DT(r402) DT(q104):DA(r401) DA(q105):DT(r400) DT(q106):DA(r399) DA(q107):DT(r398) DT(q108):DA(r397) DA(q109):DT(r396) DT(q110):DA(r395) DA(q111):DT(r394) DT(q112):DA(r393) DA(q113):DT(r392) DT(q114):DA(r391) DA(q115):DT(r390) DT(q116):DA(r389) DA(q117):DT(r388) DT(q118):DA(r387) DA(q119):DT(r386) DT(q120):DA(r385) DA(q121):DT(r384) DT(q122):DA(r383) DA(q123):DT(r382) DT(q124):DA(r381) DA(q125):DT(r380) DT(q126):DA(r379) DA(q127):DT(r378) DT(q128):DA(r377) DA(q129):DT(r376) DT(q130):DA(r375) DA(q131):DT(r374) DT(q132):DA(r373) DA(q133):DT(r372) DT(q134):DA(r371) DA(q135):DT(r370) DT(q136):DA(r369) DA(q137):DT(r368) DT(q138):DA(r367) DA(q139):DT(r366) DT(q140):DA(r365) DA(q141):DT(r364) DT(q142):DA(r363) DA(q143):DT(r362) DT(q144):DA(r361) DA(q145):DT(r360) DT(q146):DA(r359) DA(q147):DT(r358) DT(q148):DA(r357) DA(q149):DT(r356) DT(q150):DA(r355) DA(q151):DT(r354) DT(q152):DA(r353) DA(q153):DT(r352) DT(q154):DA(r351) DA(q155):DT(r350) DT(q156):DA(r349) DA(q157):DT(r348) DT(q158):DA(r347) DA(q159):DT(r346) DT(q160):DA(r345) DA(q161):DT(r344) DT(q162):DA(r343) DA(q163):DT(r342) DT(q164):DA(r341) DA(q165):DT(r340) DT(q166):DA(r339) DA(q167):DT(r338) DT(q168):DA(r337) DA(q169):DT(r336) DT(q170):DA(r335) DA(q171):DT(r334) DT(q172):DA(r333) DA(q173):DT(r332) DT(q174):DA(r331) DA(q175):DT(r330) DT(q176):DA(r329) DA(q177):DT(r328) DT(q178):DA(r327) DA(q179):DT(r326) DT(q180):DA(r325) DA(q181):DT(r324) DT(q182):DA(r323) DA(q183):DT(r322) DT(q184):DA(r321) DA(q185):DT(r320) DT(q186):DA(r319) DA(q187):DT(r318) DT(q188):DA(r317) DA(q189):DT(r316) DT(q190):DA(r315) DA(q191):DT(r314) DT(q192):DA(r313) DA(q193):DT(r312) DT(q194):DA(r311) DA(q195):DT(r310) DT(q196):DA(r309) DA(q197):DT(r308) DT(q198):DA(r307) DA(q199):DT(r306) DT(q200):DA(r305) DA(q201):DT(r304) DT(q202):DA(r303) DA(q203):DT(r302) DT(q204):DA(r301) DA(q205):DT(r300) DT(q206):DA(r299) DA(q207):DT(r298) DT(q208):DA(r297) DA(q209):DT(r296) DT(q210):DA(r295) DA(q211):DT(r294) DT(q212):DA(r293) DA(q213):DT(r292) DT(q214):DA(r291) DA(q215):DT(r290) DT(q216):DA(r289) DA(q217):DT(r288) DT(q218):DA(r287) DA(q219):DT(r286) DT(q220):DA(r285) DA(q221):DT(r284) DT(q222):DA(r283) DA(q223):DT(r282) DT(q224):DA(r281) DA(q225):DT(r280) DT(q226):DA(r279) DA(q227):DT(r278) DT(q228):DA(r277) DA(q229):DT(r276) DT(q230):DA(r275) DA(q231):DT(r274) DT(q232):DA(r273) DA(q233):DT(r272) DT(q234):DA(r271) DA(q235):DT(r270) DT(q236):DA(r269) DA(q237):DT(r268) DT(q238):DA(r267) DA(q239):DT(r266) DT(q240):DA(r265) DA(q241):DT(r264) DT(q242):DA(r263) DA(q243):DT(r262) DT(q244):DA(r261) DA(q245):DT(r260) DT(q246):DA(r259) DA(q247):DT(r258) DT(q248):DA(r257) DA(q249):DT(r256) DT(q250):DA(r255) DA(q251):DT(r254) DT(q252):DA(r253) chainH ( 10) TYR16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) TRP44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ILE76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rqdskdryqYkqYiyrsiggivppemaetvtanqtaqWeagftpyhklRlaikeicktdgipnikwgmyIafgEkllksylkmkagsassdmiaeyinnaisafssrtgisqetaqkiadfitsny >5w7g_I: title=AN ENVELOPE OF A FILAMENTOUS HYPERTHERMOPHILIC VIRUS CARRIES LIPIDS IN A HORSESHOE CONFORMATION organism=ACIDIANUS FILAMENTOUS VIRUS 1 DNA sequence DA(r253):DT(q252) DT(r254):DA(q251) DA(r255):DT(q250) DT(r256):DA(q249) DA(r257):DT(q248) DT(r258):DA(q247) DA(r259):DT(q246) DT(r260):DA(q245) DA(r261):DT(q244) DT(r262):DA(q243) DA(r263):DT(q242) DT(r264):DA(q241) DA(r265):DT(q240) DT(r266):DA(q239) DA(r267):DT(q238) DT(r268):DA(q237) DA(r269):DT(q236) DT(r270):DA(q235) DA(r271):DT(q234) DT(r272):DA(q233) DA(r273):DT(q232) DT(r274):DA(q231) DA(r275):DT(q230) DT(r276):DA(q229) DA(r277):DT(q228) DT(r278):DA(q227) DA(r279):DT(q226) DT(r280):DA(q225) DA(r281):DT(q224) DT(r282):DA(q223) DA(r283):DT(q222) DT(r284):DA(q221) DA(r285):DT(q220) DT(r286):DA(q219) DA(r287):DT(q218) DT(r288):DA(q217) DA(r289):DT(q216) DT(r290):DA(q215) DA(r291):DT(q214) DT(r292):DA(q213) DA(r293):DT(q212) DT(r294):DA(q211) DA(r295):DT(q210) DT(r296):DA(q209) DA(r297):DT(q208) DT(r298):DA(q207) DA(r299):DT(q206) DT(r300):DA(q205) DA(r301):DT(q204) DT(r302):DA(q203) DA(r303):DT(q202) DT(r304):DA(q201) DA(r305):DT(q200) DT(r306):DA(q199) DA(r307):DT(q198) DT(r308):DA(q197) DA(r309):DT(q196) DT(r310):DA(q195) DA(r311):DT(q194) DT(r312):DA(q193) DA(r313):DT(q192) DT(r314):DA(q191) DA(r315):DT(q190) DT(r316):DA(q189) DA(r317):DT(q188) DT(r318):DA(q187) DA(r319):DT(q186) DT(r320):DA(q185) DA(r321):DT(q184) DT(r322):DA(q183) DA(r323):DT(q182) DT(r324):DA(q181) DA(r325):DT(q180) DT(r326):DA(q179) DA(r327):DT(q178) DT(r328):DA(q177) DA(r329):DT(q176) DT(r330):DA(q175) DA(r331):DT(q174) DT(r332):DA(q173) DA(r333):DT(q172) DT(r334):DA(q171) DA(r335):DT(q170) DT(r336):DA(q169) DA(r337):DT(q168) DT(r338):DA(q167) DA(r339):DT(q166) DT(r340):DA(q165) DA(r341):DT(q164) DT(r342):DA(q163) DA(r343):DT(q162) DT(r344):DA(q161) DA(r345):DT(q160) DT(r346):DA(q159) DA(r347):DT(q158) DT(r348):DA(q157) DA(r349):DT(q156) DT(r350):DA(q155) DA(r351):DT(q154) DT(r352):DA(q153) DA(r353):DT(q152) DT(r354):DA(q151) DA(r355):DT(q150) DT(r356):DA(q149) DA(r357):DT(q148) DT(r358):DA(q147) DA(r359):DT(q146) DT(r360):DA(q145) DA(r361):DT(q144) DT(r362):DA(q143) DA(r363):DT(q142) DT(r364):DA(q141) DA(r365):DT(q140) DT(r366):DA(q139) DA(r367):DT(q138) DT(r368):DA(q137) DA(r369):DT(q136) DT(r370):DA(q135) DA(r371):DT(q134) DT(r372):DA(q133) DA(r373):DT(q132) DT(r374):DA(q131) DA(r375):DT(q130) DT(r376):DA(q129) DA(r377):DT(q128) DT(r378):DA(q127) DA(r379):DT(q126) DT(r380):DA(q125) DA(r381):DT(q124) DT(r382):DA(q123) DA(r383):DT(q122) DT(r384):DA(q121) DA(r385):DT(q120) DT(r386):DA(q119) DA(r387):DT(q118) DT(r388):DA(q117) DA(r389):DT(q116) DT(r390):DA(q115) DA(r391):DT(q114) DT(r392):DA(q113) DA(r393):DT(q112) DT(r394):DA(q111) DA(r395):DT(q110) DT(r396):DA(q109) DA(r397):DT(q108) DT(r398):DA(q107) DA(r399):DT(q106) DT(r400):DA(q105) DA(r401):DT(q104) DT(r402):DA(q103) DA(r403):DT(q102) DT(r404):DA(q101) DA(r405):DT(q100) DT(r406):DA(q99) DA(r407):DT(q98) DT(r408):DA(q97) DA(r409):DT(q96) DT(r410):DA(q95) DA(r411):DT(q94) DT(r412):DA(q93) DA(r413):DT(q92) DT(r414):DA(q91) DA(r415):DT(q90) DT(r416):DA(q89) DA(r417):DT(q88) DT(r418):DA(q87) DA(r419):DT(q86) DT(r420):DA(q85) DA(r421):DT(q84) DT(r422):DA(q83) DA(r423):DT(q82) DT(r424):DA(q81) DA(r425):DT(q80) DT(r426):DA(q79) DA(r427):DT(q78) DT(r428):DA(q77) DA(r429):DT(q76) DT(r430):DA(q75) DA(r431):DT(q74) DT(r432):DA(q73) DA(r433):DT(q72) DT(r434):DA(q71) DA(r435):DT(q70) DT(r436):DA(q69) DA(r437):DT(q68) DT(r438):DA(q67) DA(r439):DT(q66) DT(r440):DA(q65) DA(r441):DT(q64) DT(r442):DA(q63) DA(r443):DT(q62) DT(r444):DA(q61) DA(r445):DT(q60) DT(r446):DA(q59) DA(r447):DT(q58) DT(r448):DA(q57) DA(r449):DT(q56) DT(r450):DA(q55) DA(r451):DT(q54) DT(r452):DA(q53) DA(r453):DT(q52) DT(r454):DA(q51) DA(r455):DT(q50) DT(r456):DA(q49) DA(r457):DT(q48) DT(r458):DA(q47) DA(r459):DT(q46) DT(r460):DA(q45) DA(r461):DT(q44) DT(r462):DA(q43) DA(r463):DT(q42) DT(r464):DA(q41) DA(r465):DT(q40) DT(r466):DA(q39) DA(r467):DT(q38) DT(r468):DA(q37) DA(r469):DT(q36) DT(r470):DA(q35) DA(r471):DT(q34) DT(r472):DA(q33) DA(r473):DT(q32) DT(r474):DA(q31) DA(r475):DT(q30) DT(r476):DA(q29) DA(r477):DT(q28) DT(r478):DA(q27) DA(r479):DT(q26) DT(r480):DA(q25) DA(r481):DT(q24) DT(r482):DA(q23) DA(r483):DT(q22) DT(r484):DA(q21) DA(r485):DT(q20) DT(r486):DA(q19) DA(r487):DT(q18) DT(r488):DA(q17) DA(r489):DT(q16) DT(r490):DA(q15) DA(r491):DT(q14) DT(r492):DA(q13) DA(r493):DT(q12) DT(r494):DA(q11) DA(r495):DT(q10) DT(r496):DA(q9) DA(r497):DT(q8) DT(r498):DA(q7) DA(r499):DT(q6) DT(r500):DA(q5) DA(r501):DT(q4) DT(r502):DA(q3) DA(r503):DT(q2) DT(r504):DA(q1) chainI ( 11) TYR16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ASP45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ILE75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ILE78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ALA79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) GLU82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rklrqdstdrYktklylwrnlgglipedmaisvtesitaDwkqYndmmskvrnetldilktnkvatedyIgyIAfaEelahqvwknknsspdpntaneasktdleskysdvygldvtvldaiynavipiim >5w9q_A: title=ZINC FINGER REGION OF MBD1 IN COMPLEX WITH CPG DNA organism=? DNA sequence DG(C1):DC(D12) DC(C2):DG(D11) DC(C3):DG(D10) DA(C4):DT(D9) DA(C5):DT(D8) DC(C6):DG(D7) DG(C7):DC(D6) DT(C8):DA(D5) DT(C9):DA(D4) DG(C10):DC(D3) DG(C11):DC(D2) DC(C12):DG(D1) chainA ( 1) ARG333 0 0 0 4 0 0 0 0 0 0 0 0 ( 37) ARG369 0 0 0 0 9 14 11 0 0 0 0 0 ( 38) GLN370 0 0 0 0 0 6 5 1 0 0 0 0 ( 50) MET382 0 0 0 0 0 0 2 2 0 0 0 0 ( 52) ARG384 0 0 0 0 0 0 0 0 0 7 0 0 prot.sequence RqnrkcgacaaclrrmdcgrcdfccdkpkfggsnqkRQkcrwrqclqfaMkRllps >5w9s_C: title=ZINC FINGER OF HUMAN CXXC5 IN COMPLEX WITH CPG DNA organism=HOMO SAPIENS DNA sequence DG(A1):DC(B12) DC(A2):DG(B11) DC(A3):DG(B10) DA(A4):DT(B9) DA(A5):DT(B8) DC(A6):DG(B7) DG(A7):DC(B6) DT(A8):DA(B5) DT(A9):DA(B4) DG(A10):DC(B3) DG(A11):DC(B2) DC(A12):DG(B1) chainC ( 2) LYS259 0 0 0 4 0 0 0 0 0 0 0 0 ( 31) HIS288 0 0 0 0 14 16 10 0 0 0 0 0 ( 32) GLN289 0 0 0 0 0 8 5 1 0 0 0 0 prot.sequence kKrkrcgmcapcrrrinceqcsscrnrktgHQickfrkceelkk >5wc9_A:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=HUMAN PIT-1 AND 4XCATT DNA COMPLEX organism=Homo sapiens DNA sequence DC(C170):DG(D188) DA(C172):DT(D187) DT(C173):DA(D186) DT(C174):DA(D185) DC(C175):DG(D184) DA(C176):DT(D183) DT(C177):DA(D182) DT(C178):DA(D181) DC(C179):DG(D180) DA(C180):DT(D179) DT(C181):DA(D178) DT(C182):DA(D177) DC(C183):DG(D176) DA(C184):DT(D175) DT(C185):DA(D174) DT(C186):DA(D173) DC(C187):DG(D172) DG(C188):DC(D171) DG(C189):DC(D170) chainA ( 42) SER43 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR45 0 0 7 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) CYS48 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 0 8 11 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG95 0 3 8 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) VAL137 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 (127) ASN141 0 0 0 0 10 13 1 0 0 0 0 0 0 0 0 0 0 0 0 (130) GLN144 0 0 0 0 0 1 10 7 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dspeirelekfanefkvrriklgytqtnvgealaavhgsefSQTtiCRfenlqlsfknacklkailskwleeaeqvgakrRttisiaakdalerhfgeqnkpssqeimrmaeelnlekevvrVwfcNrrQrekrvk >5wc9_AB:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=HUMAN PIT-1 AND 4XCATT DNA COMPLEX organism=Homo sapiens DNA sequence DC(C170):DG(D188) DA(C172):DT(D187) DT(C173):DA(D186) DT(C174):DA(D185) DC(C175):DG(D184) DA(C176):DT(D183) DT(C177):DA(D182) DT(C178):DA(D181) DC(C179):DG(D180) DA(C180):DT(D179) DT(C181):DA(D178) DT(C182):DA(D177) DC(C183):DG(D176) DA(C184):DT(D175) DT(C185):DA(D174) DT(C186):DA(D173) DC(C187):DG(D172) DG(C188):DC(D171) DG(C189):DC(D170) chainB ( 26) GLN27 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 42) SER43 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 11 12 0 0 0 0 0 0 0 0 0 ( 44) THR45 0 0 0 0 0 0 0 0 0 0 7 7 4 0 0 0 0 0 0 ( 47) CYS48 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 0 0 0 0 0 0 0 0 0 7 14 6 0 0 0 0 0 ( 78) ARG95 0 0 0 0 0 0 0 0 0 2 8 9 5 0 0 0 0 0 0 (120) VAL137 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 (124) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 8 13 0 0 0 0 0 (127) GLN144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 (131) ARG148 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainA ( 42) SER43 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR45 0 0 7 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) CYS48 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 0 8 11 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG95 0 3 8 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) VAL137 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 (127) ASN141 0 0 0 0 10 13 1 0 0 0 0 0 0 0 0 0 0 0 0 (130) GLN144 0 0 0 0 0 1 10 7 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dspeirelekfanefkvrriklgytqtnvgealaavhgsefSQTtiCRfenlqlsfknacklkailskwleeaeqvgakrRttisiaakdalerhfgeqnkpssqeimrmaeelnlekevvrVwfcNrrQrekrvk/dspeirelekfanefkvrriklgytQtnvgealaavhgsefSQTtiCRfenlqlsfknacklkailskwleeaeqvrRttisiaakdalerhfgeqnkpssqeimrmaeelnlekevvrVwfcNrrQrekRvk >5wc9_EF:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=HUMAN PIT-1 AND 4XCATT DNA COMPLEX organism=Homo sapiens DNA sequence DC(H170):DG(G189) DC(H171):DG(G188) DG(H172):DC(G187) DA(H173):DT(G186) DA(H174):DT(G185) DT(H175):DA(G184) DG(H176):DC(G183) DA(H177):DT(G182) DA(H178):DT(G181) DT(H179):DA(G180) DG(H180):DC(G179) DA(H181):DT(G178) DA(H182):DT(G177) DT(H183):DA(G176) DG(H184):DC(G175) DA(H185):DT(G174) DA(H186):DT(G173) DT(H187):DA(G172) DG(H188):DC(G170) chainE ( 25) GLN27 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 41) SER43 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN44 0 0 0 0 0 0 0 0 0 12 12 0 0 0 0 0 0 0 0 ( 43) THR45 0 0 0 0 0 0 4 7 6 1 0 0 0 0 0 0 0 0 0 ( 46) CYS48 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 ( 47) ARG49 0 0 0 0 0 6 13 4 0 0 0 0 0 0 0 0 0 0 0 ( 52) GLN54 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 77) ARG95 0 0 0 0 0 0 4 8 6 3 0 0 0 0 0 0 0 0 0 (119) VAL137 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ASN141 0 0 0 0 0 13 6 0 0 0 0 0 0 0 0 0 0 0 0 (126) GLN144 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ARG148 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainF ( 42) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 ( 44) THR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 3 0 0 ( 47) CYS48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 48) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 7 2 0 0 ( 77) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 12 0 0 (119) VAL137 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (123) ASN141 0 0 0 0 0 0 0 0 0 0 0 0 0 13 8 0 0 0 0 (126) GLN144 0 0 0 0 0 0 0 0 0 0 0 9 11 1 0 0 0 0 0 (130) ARG148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence speirelekfanefkvrriklgytQtnvgealaavhgsefSQTtiCRfenlQlsfknacklkailskwleeaeqkrRttisiaakdalerhfgeqnkpssqeimrmaeelnlekevvrVwfcNrrQrekRvk/dspeirelekfanefkvrriklgytqtnvgealaavhgsefSQTtiCRfenlqlsfknacklkailskwleeaeqrRttisiaakdalerhfgeqnkpssqeimrmaeelnlekevvrVwfcNrrQrekRvk >5wcu_N:Histone-fold; title=CRYSTAL STRUCTURE OF 167 BP NUCLEOSOME BOUND TO THE GLOBULAR DOMAIN OF LINKER HISTONE H5 organism=? DNA sequence DA(S1):DT(T167) DT(S2):DA(T166) DC(S3):DG(T165) DG(S4):DC(T164) DG(S5):DC(T163) DC(S6):DG(T162) DC(S7):DG(T161) DG(S8):DC(T160) DC(S9):DG(T159) DC(S10):DG(T158) DA(S11):DT(T157) DT(S12):DA(T156) DC(S13):DG(T155) DG(S14):DC(T154) DA(S15):DT(T153) DG(S16):DC(T152) DA(S17):DT(T151) DA(S18):DT(T150) DT(S19):DA(T149) DC(S20):DG(T148) DC(S21):DG(T147) DC(S22):DG(T146) DG(S23):DC(T145) DG(S24):DC(T144) DT(S25):DA(T143) DG(S26):DC(T142) DC(S27):DG(T141) DC(S28):DG(T140) DG(S29):DC(T139) DA(S30):DT(T138) DG(S31):DC(T137) DG(S32):DC(T136) DC(S33):DG(T135) DC(S34):DG(T134) DG(S35):DC(T133) DC(S36):DG(T132) DT(S37):DA(T131) DC(S38):DG(T130) DA(S39):DT(T129) DA(S40):DT(T128) DT(S41):DA(T127) DT(S42):DA(T126) DG(S43):DC(T125) DG(S44):DC(T124) DT(S45):DA(T123) DC(S46):DG(T122) DG(S47):DC(T121) DT(S48):DA(T120) DA(S49):DT(T119) DG(S50):DC(T118) DA(S51):DT(T117) DC(S52):DG(T116) DA(S53):DT(T115) DG(S54):DC(T114) DC(S55):DG(T113) DT(S56):DA(T112) DC(S57):DG(T111) DT(S58):DA(T110) DA(S59):DT(T109) DG(S60):DC(T108) DC(S61):DG(T107) DA(S62):DT(T106) DC(S63):DG(T105) DC(S64):DG(T104) DG(S65):DC(T103) DC(S66):DG(T102) DT(S67):DA(T101) DT(S68):DA(T100) DA(S69):DT(T99) DA(S70):DT(T98) DA(S71):DT(T97) DC(S72):DG(T96) DG(S73):DC(T95) DC(S74):DG(T94) DA(S75):DT(T93) DC(S76):DG(T92) DG(S77):DC(T91) DT(S78):DA(T90) DA(S79):DT(T89) DC(S80):DG(T88) DG(S81):DC(T87) DC(S82):DG(T86) DC(S84):DG(T84) DT(S85):DA(T83) DG(S86):DC(T82) DT(S87):DA(T81) DC(S88):DG(T80) DC(S89):DG(T79) DC(S90):DG(T78) DC(S91):DG(T77) DC(S92):DG(T76) DG(S93):DC(T75) DC(S94):DG(T74) DG(S95):DC(T73) DT(S96):DA(T72) DT(S97):DA(T71) DT(S98):DA(T70) DT(S99):DA(T69) DA(S100):DT(T68) DA(S101):DT(T67) DC(S102):DG(T66) DC(S103):DG(T65) DG(S104):DC(T64) DC(S105):DG(T63) DC(S106):DG(T62) DA(S107):DT(T61) DA(S108):DT(T60) DG(S109):DC(T59) DG(S110):DC(T58) DG(S111):DC(T57) DG(S112):DC(T56) DA(S113):DT(T55) DT(S114):DA(T54) DT(S115):DA(T53) DA(S116):DT(T52) DC(S117):DG(T51) DT(S118):DA(T50) DC(S119):DG(T49) DC(S120):DG(T48) DC(S121):DG(T47) DT(S122):DA(T46) DA(S123):DT(T45) DG(S124):DC(T44) DT(S125):DA(T43) DC(S126):DG(T42) DT(S127):DA(T41) DC(S128):DG(T40) DC(S129):DG(T39) DA(S130):DT(T38) DG(S131):DC(T37) DG(S132):DC(T36) DC(S133):DG(T35) DA(S134):DT(T34) DC(S135):DG(T33) DG(S136):DC(T32) DT(S137):DA(T31) DG(S138):DC(T30) DT(S139):DA(T29) DC(S140):DG(T28) DA(S141):DT(T27) DG(S142):DC(T26) DA(S143):DT(T25) DT(S144):DA(T24) DA(S145):DT(T23) DT(S146):DA(T22) DA(S147):DT(T21) DT(S148):DA(T20) DA(S149):DT(T19) DC(S150):DG(T18) DA(S151):DT(T17) DT(S152):DA(T16) DC(S153):DG(T15) DC(S154):DG(T14) DG(S155):DC(T13) DA(S156):DT(T12) DT(S157):DA(T11) DG(S158):DC(T10) DC(S159):DG(T9) DA(S160):DT(T8) DT(S161):DA(T7) DG(S162):DC(T6) DA(S164):DT(T4) chainN ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >5wfe_AB: title=CAS1-CAS2-IHF-DNA HOLO-COMPLEX organism=ESCHERICHIA COLI K-12 DNA sequence DA(h46):DT(i77) DA(h47):DT(i76) DA(h48):DT(i75) DG(h49):DC(i74) DT(h50):DA(i73) DT(h51):DA(i72) DG(h52):DC(i71) DG(h53):DC(i70) DT(h54):DA(i69) DA(h55):DT(i68) DG(h56):DC(i67) DA(h57):DT(i66) DT(h58):DA(i65) DT(h59):DA(i64) DG(h60):DC(i63) DT(h61):DA(i62) DG(h62):DC(i61) DA(h63):DT(i60) DC(h64):DG(i59) DT(h65):DA(i58) DG(h66):DC(i57) DG(h67):DC(i56) DC(h68):DG(i55) DT(h69):DA(i54) DT(h70):DA(i53) DA(h71):DT(i52) DA(h72):DT(i51) DA(h73):DT(i50) DA(h74):DT(i49) DA(h75):DT(i48) DA(h76):DT(i47) DT(h77):DA(i46) DC(h78):DG(i45) DA(h79):DT(i44) DT(h80):DA(i43) DT(h81):DA(i42) DA(h82):DT(i41) DA(h83):DT(i40) DT(h84):DA(i39) DT(h85):DA(i38) DA(h86):DT(i37) DA(h87):DT(i36) DT(h88):DA(i35) DA(h89):DT(i34) DA(h90):DT(i33) DT(h91):DA(i32) DA(h92):DT(i31) DG(h93):DC(i30) DG(h94):DC(i29) DT(h95):DA(i28) DT(h96):DA(i27) DA(h97):DT(i26) DT(h98):DA(i25) DG(h99):DC(i24) DT(h100):DA(i23) DT(h101):DA(i22) DT(h102):DA(i21) DA(h103):DT(i20) DG(h104):DC(i19) DA(h105):DT(i18) chainA (123) ARG138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (128) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (131) ARG146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 0 0 chainB (130) ARG131 0 0 0 0 0 0 0 5 11 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG132 0 0 0 0 0 4 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smiflqygqidvidgafvlidktgirthipvgsvacimlepgtrvshaavrlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlRgiegSrvRatyallakqygvtwngrrydpkdwdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqpp/twlplnpiplkdrvsmiflqygqidvidgafvlidktgirthipvgsvacimlepgtrvshaavrlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepapaRRsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqpp >5wfe_B: title=CAS1-CAS2-IHF-DNA HOLO-COMPLEX organism=? DNA sequence DT(i18):DA(h105) DC(i19):DG(h104) DT(i20):DA(h103) DA(i21):DT(h102) DA(i22):DT(h101) DA(i23):DT(h100) DC(i24):DG(h99) DA(i25):DT(h98) DT(i26):DA(h97) DA(i27):DT(h96) DA(i28):DT(h95) DC(i29):DG(h94) DC(i30):DG(h93) DT(i31):DA(h92) DA(i32):DT(h91) DT(i33):DA(h90) DT(i34):DA(h89) DA(i35):DT(h88) DT(i36):DA(h87) DT(i37):DA(h86) DA(i38):DT(h85) DA(i39):DT(h84) DT(i40):DA(h83) DT(i41):DA(h82) DA(i42):DT(h81) DA(i43):DT(h80) DT(i44):DA(h79) DG(i45):DC(h78) DA(i46):DT(h77) DT(i47):DA(h76) DT(i48):DA(h75) DT(i49):DA(h74) DT(i50):DA(h73) DT(i51):DA(h72) DT(i52):DA(h71) DA(i53):DT(h70) DA(i54):DT(h69) DG(i55):DC(h68) DC(i56):DG(h67) DC(i57):DG(h66) DA(i58):DT(h65) DG(i59):DC(h64) DT(i60):DA(h63) DC(i61):DG(h62) DA(i62):DT(h61) DC(i63):DG(h60) DA(i64):DT(h59) DA(i65):DT(h58) DT(i66):DA(h57) DC(i67):DG(h56) DT(i68):DA(h55) DA(i69):DT(h54) DC(i70):DG(h53) DC(i71):DG(h52) DA(i72):DT(h51) DA(i73):DT(h50) DC(i74):DG(h49) DT(i75):DA(h48) DT(i76):DA(h47) DT(i77):DA(h46) chainB (130) ARG131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 11 5 0 0 0 0 0 0 0 (131) ARG132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 4 0 0 0 0 0 prot.sequence twlplnpiplkdrvsmiflqygqidvidgafvlidktgirthipvgsvacimlepgtrvshaavrlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepapaRRsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaageiqpp >5wfe_CDEF: title=CAS1-CAS2-IHF-DNA HOLO-COMPLEX organism=ESCHERICHIA COLI K-12 DNA sequence DA(H1):DT(G23) DT(H2):DA(G22) DT(H3):DA(G21) DT(H4):DA(G20) DA(H5):DT(G19) DC(H6):DG(G18) DT(H7):DA(G17) DA(H8):DT(G16) DC(H9):DG(G15) DT(H10):DA(G14) DC(H11):DG(G13) DG(H12):DC(G12) DT(H13):DA(G11) DT(H14):DA(G10) DC(H15):DG(G9) DT(H16):DA(G8) DG(H17):DC(G7) DG(H18):DC(G6) DT(H19):DA(G5) DG(H20):DC(G4) DT(H21):DA(G3) DT(H22):DA(G2) DT(H23):DA(G1) chainC ( 7) TYR22 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS37 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PRO56 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE chainF prot.sequence smiflqYgqidvidgafvlidKtgirthipvgsvacimlePgtrvshaavrlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaagei/lplnpiPlkdrvsmiflqygqIdvidgafvlidktgirthIpvgsvacimlepgtrvshaavrlaaqvgtllvwvgeagvrvyasgqpggarsdkllyqaklaldedlrlkvvrkmfelrfgepaparrsveqlrgiegsrvratyallakqygvtwngrrydpkdwekgdtinqcisaatsclygvteaailaagyapaigfvhtgkplsfvydiadiikfdtvvpkafeiarrnpgepdrevrlacrdifrssktlaklipliedvlaag/msmlvvVtenvpprlrgrlaiWllevragvyvgdvsakirEmiweqiaglaeegnvvmawatntetgfefqtfglnrrtpvdldglrlvsflpv/msmlvvVtenvpprlrgrlaiWllevragvyvgdvsakirEmiweqiaglaeegnvvmawatntetgfefqtfglnrrtpvdldglrlvsflpv >5wfe_KL: title=CAS1-CAS2-IHF-DNA HOLO-COMPLEX organism=ESCHERICHIA COLI S88 DNA sequence DA(J-6):DT(I79) DA(J-5):DT(I78) DA(J-4):DT(I77) DG(J-3):DC(I76) DT(J-2):DA(I75) DT(J-1):DA(I74) DG(J0):DC(I73) DG(J1):DC(I72) DT(J2):DA(I71) DA(J3):DT(I70) DG(J4):DC(I69) DA(J5):DT(I68) DT(J6):DA(I67) DT(J7):DA(I66) DG(J8):DC(I65) DT(J9):DA(I64) DG(J10):DC(I63) DA(J11):DT(I62) DC(J12):DG(I61) DT(J13):DA(I60) DG(J14):DC(I59) DG(J15):DC(I58) DC(J16):DG(I57) DT(J17):DA(I56) DT(J18):DA(I55) DA(J19):DT(I54) DA(J20):DT(I53) DA(J21):DT(I52) DA(J22):DT(I51) DA(J23):DT(I50) DA(J24):DT(I49) DT(J25):DA(I48) DC(J26):DG(I47) DA(J27):DT(I46) DT(J28):DA(I45) DT(J29):DA(I44) DA(J30):DT(I43) DA(J31):DT(I42) DT(J32):DA(I41) DT(J33):DA(I40) DA(J34):DT(I39) DA(J35):DT(I38) DT(J36):DA(I37) DA(J37):DT(I36) DA(J38):DT(I35) DT(J39):DA(I34) DA(J40):DT(I33) DG(J41):DC(I32) DG(J42):DC(I31) DT(J43):DA(I30) DT(J44):DA(I29) DA(J45):DT(I28) DT(J46):DA(I27) DG(J47):DC(I26) DT(J48):DA(I25) DT(J49):DA(I24) DT(J50):DA(I23) DA(J51):DT(I22) DG(J52):DC(I21) DA(J53):DT(I20) chainK ( 59) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 46) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 1 0 0 0 0 0 0 0 0 ( 62) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence altkaemseylfdklglskrdakelvelffeeirralengeqvklsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenaspk/mtkselierlatqqshipaktvedavkemlehmastlaqgerieiRgfgsfslhyraprtgRNPKtgdkvelegkyvphfkpgkelrdraniyg >5wjq_D:beta-beta-alpha_zinc_fingers; title=MOUSEZFP568-ZNF2-11 IN COMPLEX WITH DNA organism=Mus musculus DNA sequence DT(A1):DA(B28) DG(A2):DC(B27) DT(A3):DA(B26) DG(A4):DC(B25) DG(A5):DC(B24) DG(A6):DC(B23) DC(A7):DG(B22) DG(A8):DC(B21) DT(A9):DA(B20) DG(A10):DC(B19) DG(A11):DC(B18) DC(A12):DG(B17) DA(A13):DT(B16) DC(A14):DG(B15) DA(A15):DT(B14) DG(A16):DC(B13) DG(A17):DC(B12) DT(A18):DA(B11) DA(A19):DT(B10) DA(A20):DT(B9) DA(A21):DT(B8) DA(A22):DT(B7) DA(A23):DT(B6) DG(A24):DC(B5) DG(A25):DC(B4) DG(A26):DC(B3) DC(A27):DG(B2) DA(A28):DT(B1) chainD ( 45) ARG430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 10 6 0 ( 47) SER432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 48) HIS433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 ( 51) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 11 0 0 0 0 ( 73) TYR458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 74) ASP459 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 ( 75) THR460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (101) CYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (103) SER488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 (107) LEU492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (128) ILE513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (129) SER514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (131) SER516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 (132) HIS517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 2 0 0 0 0 0 0 0 0 (135) ARG520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 13 3 0 0 0 0 0 0 0 0 0 0 (157) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 (160) GLU545 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ARG548 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) THR572 0 0 0 0 0 0 0 0 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) GLU573 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) ARG576 0 0 0 0 0 0 0 0 0 5 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) ARG598 0 0 0 0 0 0 0 0 20 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) GLU601 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) ARG626 0 0 0 0 0 0 7 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) SER628 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) GLU629 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) ARG632 0 0 0 0 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG654 0 0 0 15 16 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) HIS657 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) GLN660 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gsekpykcqecgkafpsnaqlslhhrvhtdekcfeckecgkafmRpSHllRhqrihtgekphkckecgkafrYDTqlslhllthagarrfeckdcdkvysCaSqlaLhqmshtgekphkckecgkgfISdSHllRhqsvhtgetpykckecgkgfrRgsElaRhqrahsgdkpykckecgksftCtTElfRhqkvhtgdrphkckecgkafiRrsElthhershsgekpyeckecgktfgRgSElsRhqkihtgekpykcqqcgkafiRgsHltQhqriht >5wjr_A:Ribonuclease_H-like; title=HIGH RESOLUTION NATIVE HEXAMER DNA AND RNA HYBRID IN COMPLEX WITH RNASE H CATALYTIC DOMAIN D132N MUTANT organism=Bacillus halodurans DNA sequence DA(C1) DT(C2) DG(C3) DT(C4) DC(C5) DG(C6) chainA ( 16) ASN77 0 4 0 0 0 0 ( 44) ASN105 0 0 8 0 0 0 ( 45) ASN106 0 0 11 1 0 0 ( 73) GLN134 0 0 0 0 2 0 ( 74) THR135 0 0 1 2 0 0 prot.sequence eiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysnsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikady >5wm1_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF THE 10S (+)-TRANS-BP-DG MODIFIED REV1 TERNARY COMPLEX organism=? DNA sequence DG(P1):DC(T17) DG(P2):DC(T16) DG(P3):DC(T15) DG(P4):DC(T14) DT(P5):DA(T13) DG(P6):DC(T12) DT(P7):DA(T11) DG(P8):DC(T10) DG(P9):DC(T9) DT(P10):DA(T8) DA(P11):DT(T7) chainA ( 24) SER329 0 0 0 0 0 0 0 0 0 0 3 (321) ASP626 0 0 0 0 0 0 0 0 0 0 11 (387) SER692 0 0 0 0 0 0 1 0 0 0 0 prot.sequence rivacddpdfltsyfahsrlhhlSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdv >5wm8_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF THE 10R (+)-CIS-BP-DG MODIFIED REV1 TERNARY COMPLEX organism=? DNA sequence DT(T7):DA(P11) DA(T8):DT(P10) DC(T9):DG(P9) DC(T10):DG(P8) DA(T11):DT(P7) DC(T12):DG(P6) DA(T13):DT(P5) DC(T14):DG(P4) DC(T15):DG(P3) DC(T16):DG(P2) DC(T17):DG(P1) chainA ( 23) SER329 3 0 0 0 0 0 0 0 0 0 0 (320) ASP626 10 0 0 0 0 0 0 0 0 0 0 (386) SER692 0 0 0 0 1 0 0 0 0 0 0 prot.sequence ivacddpdfltsyfahsrlhhlSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdv >5wmb_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF THE 10S (-)-CIS-BP-DG MODIFIED REV1 TERNARY COMPLEX (THE BP RESIDUE IS DISORDERED) organism=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) DNA sequence DT(T7):DA(P11) DA(T8):DT(P10) DC(T9):DG(P9) DC(T10):DG(P8) DA(T11):DT(P7) DC(T12):DG(P6) DA(T13):DT(P5) DC(T14):DG(P4) DC(T15):DG(P3) DC(T16):DG(P2) chainA ( 24) SER329 1 0 0 0 0 0 0 0 0 0 (321) ASP626 10 0 0 0 0 0 0 0 0 0 (387) SER692 0 0 0 0 1 0 0 0 0 0 prot.sequence rivacddpdfltsyfahsrlhhlSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdv >5wn0_A:DNase_I-like; title=APE1 EXONUCLEASE SUBSTRATE COMPLEX WITH A C/G MATCH organism=Homo sapiens DNA sequence DG(E1):DC(C11) DG(E2):DC(C10) DA(E3):DT(C9) DT(E4):DA(C8) DC(E5):DG(C7) DC(E6):DG(C6) DG(E7):DC(C5) DT(E8):DA(C4) DC(E9):DG(C3) DG(E10):DC(C2) DA(E11):DT(C1) DG(E12):DC(D10) DC(E13):DG(D9) DG(E14):DC(D8) DC(E15):DG(D7) DA(E16):DT(D6) DT(E17):DA(D5) DC(E18):DG(D4) DA(E19):DT(D3) DG(E20):DC(D2) DC(E21):DG(D1) chainA ( 56) LYS98 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (135) ARG177 0 0 0 0 0 0 0 0 0 0 20 13 0 0 0 0 0 0 0 0 0 (187) ASN229 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (227) TYR269 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (228) MET270 0 0 0 0 0 0 0 0 0 0 10 13 0 0 0 0 0 0 0 0 0 (229) MET271 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMMnarsknvgwrldyfllshsllpalcdskirskalgsDhcpitlylal >5wn1_A:DNase_I-like; title=APE1 EXONUCLEASE PRODUCT COMPLEX organism=Homo sapiens DNA sequence DG(D1):DC(E21) DC(D2):DG(E20) DT(D3):DA(E19) DG(D4):DC(E18) DA(D5):DT(E17) DT(D6):DA(E16) DG(D7):DC(E15) DC(D8):DG(E14) DG(D9):DC(E13) chainA ( 56) LYS98 0 0 0 0 0 0 4 1 0 (227) TYR269 0 0 0 0 0 0 0 0 3 (228) MET270 0 0 0 0 0 0 0 0 20 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdeehdqegrvivaefdsfvlvtayvpnagrglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkknagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsDhcpitlylal >5wn2_A:DNase_I-like; title=APE1 EXONUCLEASE SUBSTRATE COMPLEX WITH PHOSPHOGLYCOLATE organism=Homo sapiens DNA sequence DG(D1):DC(E21) DC(D2):DG(E20) DT(D3):DA(E19) DG(D4):DC(E18) DA(D5):DT(E17) DT(D6):DA(E16) DG(D7):DC(E15) DC(D8):DG(E14) DG(D9):DC(E13) chainA ( 56) LYS98 0 0 0 0 0 0 4 2 0 (135) ARG177 0 0 0 0 0 0 0 1 8 (227) TYR269 0 0 0 0 0 0 0 0 3 (228) MET270 0 0 0 0 0 0 0 0 11 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqqtKcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgnlnvaheeidlrnpkgnkknagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >5wn3_B:DNase_I-like; title=APE1 F266A EXONUCLEASE SUBSTRATE COMPLEX WITH A C/T MISMATCH organism=Homo sapiens DNA sequence DC(E13):DG(D9) DG(E14):DC(D8) DC(E15):DG(D7) DA(E16):DT(D6) DT(E17):DA(D5) DC(E18):DG(D4) DA(E19):DT(D3) DG(E20):DC(D2) DC(E21):DG(D1) chainB ( 55) LYS98 0 2 2 0 0 0 0 0 0 (134) ARG177 7 0 0 0 0 0 0 0 0 (226) TYR269 4 0 0 0 0 0 0 0 0 (227) MET270 19 0 0 0 0 0 0 0 0 prot.sequence lyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkknagftpqerqgfgellqavpladsfrhlypntpyaytawtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >5wn4_B:DNase_I-like; title=APE1 EXONUCLEASE SUBSTRATE COMPLEX WITH A C/T MISMATCH organism=Homo sapiens DNA sequence DG(D1):DC(E21) DC(D2):DG(E20) DT(D3):DA(E19) DG(D4):DC(E18) DA(D5):DT(E17) DT(D6):DA(E16) DG(D7):DC(E15) DC(D8):DG(E14) DG(D9):DC(E13) chainB ( 56) LYS98 0 0 0 0 0 0 2 2 0 (135) ARG177 0 0 0 0 0 0 0 0 12 (227) TYR269 0 0 0 0 0 0 0 0 3 (228) MET270 0 0 0 0 0 0 0 0 6 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkknagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >5wn5_B:DNase_I-like; title=APE1 EXONUCLEASE SUBSTRATE COMPLEX WITH A C/T MISMATCH AND MN2+ organism=Homo sapiens DNA sequence DC(E13):DG(D9) DG(E14):DC(D8) DC(E15):DG(D7) DA(E16):DT(D6) DT(E17):DA(D5) DC(E18):DG(D4) DA(E19):DT(D3) DG(E20):DC(D2) DC(E21):DG(D1) chainB ( 56) LYS98 0 1 1 0 0 0 0 0 0 (135) ARG177 28 0 0 0 0 0 0 0 0 (227) TYR269 3 0 0 0 0 0 0 0 0 (228) MET270 10 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkknagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >5wnx_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH INCOMING 6-TDGTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 37 0 0 0 0 ( 26) LYS35 7 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgtgvageplpvdsekdifdyiqwkyrepkdrse >5wny_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH INCOMING 5-FDUTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 34 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5wnz_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH INCOMING 5-FODCTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 30 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgtgvageplpvdsekdifdyiqwkyrepkdrse >5wo0_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH INCOMING 5-FODUTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 34 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >5wti_Z: title=CRYSTAL STRUCTURE OF THE CRISPR-ASSOCIATED PROTEIN IN COMPLEX WITH CRRNA AND DNA organism=BACILLUS THERMOAMYLOVORANS DNA sequence DG(E20):DC(H10) DA(E21):DT(H9) DA(E22):DT(H8) DT(E23):DA(H7) DC(E24):DG(H6) DC(E25):DG(H5) DA(E26):DT(H4) DC(E27):DG(H3) DA(E28):DT(H2) chainZ (114) ASN114 18 0 0 0 0 0 0 0 0 (115) GLN115 34 0 0 0 0 0 0 0 0 (118) ASN118 8 6 3 0 0 0 0 0 0 (122) TYR122 0 0 4 1 0 0 0 0 0 (138) SER138 0 0 2 5 2 0 0 0 0 (140) ARG140 6 9 1 0 0 0 0 0 0 (214) ARG214 0 0 0 0 2 0 0 0 0 (388) SER397 0 3 9 3 0 0 0 0 0 (389) ASN398 10 11 3 0 0 0 0 0 0 prot.sequence matrsfilkiepneevkkglwkthevlnhgiayymnilklirqeaiyehheqdpknpkkvskaeiqaelwdfvlkmqkcnsfthevdkdvvfnilrelyeelvpssvekkgeaNQlsNkflYplvdpnsqsgkgtasSgRkprwynlkiagdpsweeekkkweedkkkdplakilgklaeygliplfipftdsnepivkeikwmeksrnqsvrRldKdmfiqalerflsweswnlkvkeeyekvekehktleerikediqafksleqyekerqeqllrdtlntneyrlskrglrgwreiiqkwlkmdenepsekylevfkdyqrkhpreagdysvyeflskhpeypylyatfceidkkkkdakqqatftladpinhplwvrfeersgSNlnkyrilteqlhteklkkkltvqldrliyptesggweekgkvdivllpsrqfynqifldieekgkhaftykdesikfplkgtlggarvqfdrdhlrryphkvesgnvgriyfnmtvnieptespvskskeltewikdskgkklksgiesleiglrvmsidlgqrqaaaasifevvdqkpdiegklffpikgtelyavhrasfniklpgetlvksrevlrkarednlklmnqklnflrnvlhfqqditerekrvtkwisrqenliqirelmykpykdwvaflkqlhkrleveigkevkhwrkslsdgrkglygislknideidrtrkfllrwslrptepgevrrlepgqrfaidqlnhlnalkedrlkkmantiimhalgycydvrkkkwqaknpacqiilfedlsnynpyeersrfensklmkwsrreiprqvalqgeiyglqvgevgaqfssrfhaktgspgircsvvtkeklqdlypdkggekfislskdrklvtthadinaaqnlqkrfwtrthgfykvyckakiieefgegyfilkdkdsfdlaselkgeklmlyrdpsgnvfpsdkwmaagvffgkleriliskltnq >5wvw_A: title=THE CRYSTAL STRUCTURE OF CREN7 MUTANT L28A IN COMPLEX WITH DSDNA organism=? DNA sequence DG(D109):DC(C108) DT(D110):DA(C107) DG(D111):DC(C106) DA(D112):DT(C105) DT(D113):DA(C104) DC(D114):DG(C103) DA(D115):DT(C102) DC(D116):DG(C101) chainA ( 24) TRP26 0 0 0 5 9 0 0 0 ( 26) ALA28 0 0 0 0 4 4 0 0 ( 28) PRO30 0 0 0 0 0 3 5 0 ( 31) ARG33 0 0 0 0 0 0 0 9 ( 34) VAL36 0 0 0 0 0 4 0 0 ( 36) ILE38 0 0 0 0 5 0 0 0 ( 49) ARG51 0 0 10 15 4 0 0 0 prot.sequence sgkkpvkvktpagkeaelvpekvWaAaPkgRkgVkIglfkdpetgkyfRhklpddypi >5wvy_B: title=THE CRYSTAL STRUCTURE OF CREN7 MUTANT L28V IN COMPLEX WITH DSDNA organism=? DNA sequence DG(E101):DC(F116) DT(E102):DA(F115) DG(E103):DC(F114) DA(E104):DT(F113) DT(E105):DA(F112) DC(E106):DG(F111) DA(E107):DT(F110) DC(E108):DG(F109) chainB ( 25) TRP26 0 0 0 9 5 0 0 0 ( 27) VAL28 0 0 7 14 0 0 0 0 ( 29) PRO30 0 5 3 0 0 0 0 0 ( 32) ARG33 10 0 0 0 0 0 0 0 ( 35) VAL36 0 0 4 0 0 0 0 0 ( 37) ILE38 0 0 0 4 0 0 0 0 ( 50) ARG51 0 0 0 5 16 9 0 0 prot.sequence ssgkkpvkvktpagkeaelvpekvWaVaPkgRkgVkIglfkdpetgkyfRhklpddypi >5wvz_B: title=THE CRYSTAL STRUCTURE OF CREN7 MUTANT L28F IN COMPLEX WITH DSDNA organism=? DNA sequence DG(F109):DC(E108) DC(F110):DG(E107) DG(F111):DC(E106) DA(F112):DT(E105) DT(F113):DA(E104) DC(F114):DG(E103) DG(F115):DC(E102) DC(F116):DG(E101) chainB ( 25) TRP26 0 0 0 4 9 0 0 0 ( 27) PHE28 0 0 0 0 39 44 0 0 ( 29) PRO30 0 0 0 0 0 4 5 0 ( 32) ARG33 0 0 0 0 0 0 1 11 ( 35) VAL36 0 0 0 0 0 2 0 0 ( 37) ILE38 0 0 0 0 3 0 0 0 ( 50) ARG51 0 0 9 12 5 0 0 0 prot.sequence ssgkkpvkvktpagkeaelvpekvWaFaPkgRkgVkIglfkdpetgkyfRhklpddypi >5wwc_B: title=THE CRYSTAL STRUCTURE OF CREN7 MUTANT L28M IN COMPLEX WITH DSDNA organism=? DNA sequence DG(E101):DC(F116) DT(E102):DA(F115) DA(E103):DT(F114) DA(E104):DT(F113) DT(E105):DA(F112) DT(E106):DA(F111) DA(E107):DT(F110) DC(E108):DG(F109) chainB ( 25) TRP26 0 0 0 9 4 0 0 0 ( 27) MET28 0 0 21 16 0 0 0 0 ( 29) PRO30 0 2 6 0 0 0 0 0 ( 32) ARG33 4 2 0 0 0 0 0 0 ( 35) VAL36 0 0 2 0 0 0 0 0 ( 37) ILE38 0 0 0 3 0 0 0 0 ( 50) ARG51 0 0 0 4 14 6 0 0 prot.sequence ssgkkpvkvktpagkeaelvpekvWaMaPkgRkgVkIglfkdpetgkyfRhklpddypi >5wx9_A:DNA-binding_domain; title=CRYSTAL STRUCTURE OF ATERF96 WITH GCC-BOX organism=ARABIDOPSIS THALIANA DNA sequence DG(C12):DC(B11) DC(C13):DG(B10) DT(C14):DA(B9) DG(C15):DC(B8) DG(C16):DC(B7) DC(C17):DG(B6) DG(C18):DC(B5) DG(C19):DC(B4) DC(C20):DG(B3) DT(C21):DA(B2) DA(C22):DT(B1) chainA ( 3) GLN3 0 30 15 3 0 0 0 0 0 0 0 ( 19) ARG19 0 0 0 0 0 0 13 14 4 0 0 ( 21) ARG21 0 0 0 0 0 0 0 5 13 14 8 ( 29) GLU29 0 0 0 0 3 0 2 0 0 0 0 ( 31) ARG31 0 0 3 30 1 0 0 0 0 0 0 ( 39) ARG39 0 0 0 9 13 9 4 0 0 0 0 ( 41) TRP41 0 0 0 0 0 0 3 12 0 0 0 prot.sequence mdQggrgvgaehgkyrgvRrRpwgkyaaEiRdsrkhgeRvWlgtfdtaeeaaraydqaaysmrgqaailnfpheynmgsgvssstamagsssasasassssrqvfefeylddsvleelleegekpnkgkkk >5x07_L:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FOXA2 DNA BINDING DOMAIN BOUND TO A FULL CONSENSUS DNA SITE organism=Homo sapiens DNA sequence DC(K1):DG(J16) DA(K2):DT(J15) DA(K3):DT(J14) DA(K4):DT(J13) DA(K5):DT(J12) DT(K6):DA(J11) DG(K7):DC(J10) DT(K8):DA(J9) DA(K9):DT(J8) DA(K10):DT(J7) DA(K11):DT(J6) DC(K12):DG(J5) DA(K13):DT(J4) DA(K14):DT(J3) DG(K15):DC(J2) DA(K16):DT(J1) chainL ( 51) ASN205 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 ( 52) SER206 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 54) ARG208 0 0 0 0 0 0 0 0 0 0 1 6 7 0 0 0 ( 55) HIS209 0 0 0 0 0 0 1 15 8 5 0 0 0 0 0 0 ( 58) SER212 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 ( 59) PHE213 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 75) LYS229 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 prot.sequence gphakppysyislitmaiqqspnkmltlseiyqwimdlfpfyrqnqqrwqNSiRHslSFndcflkvprspdkpgKgsfwtlhpds >5x0x_A:Histone-fold; title=COMPLEX OF SNF2-NUCLEOSOME COMPLEX WITH SNF2 BOUND TO POSITION +6 OF THE NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger >5x11_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BACILLUS SUBTILIS PADR IN COMPLEX WITH OPERATOR DNA organism=Bacillus subtilis subsp. spizizenii strain W23 DNA sequence DC(I1):DG(J28) DG(I2):DC(J27) DG(I3):DC(J26) DA(I4):DT(J25) DA(I5):DT(J24) DC(I6):DG(J23) DA(I7):DT(J22) DT(I8):DA(J21) DG(I9):DC(J20) DT(I10):DA(J19) DA(I11):DT(J18) DA(I12):DT(J17) DA(I13):DT(J16) DT(I14):DA(J15) DA(I15):DT(J14) DG(I16):DC(J13) DT(I17):DA(J12) DT(I18):DA(J11) DA(I19):DT(J10) DC(I20):DG(J9) DA(I21):DT(J8) DT(I22):DA(J7) DG(I23):DC(J6) DA(I24):DT(J5) DT(I25):DA(J4) DT(I26):DA(J3) DA(I27):DT(J2) DC(I28):DG(J1) chainA ( 23) TYR20 0 0 0 0 0 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LYS37 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) HIS38 0 0 0 0 0 0 0 10 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER39 0 0 0 0 0 0 0 0 0 6 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN40 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) TYR42 0 0 0 0 0 0 0 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) PRO43 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) LEU65 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kdpmrvlkyailgllrkgelsgYditsyfkeelgqfwsaKHSQiYPelkkltdegfitfrttiqgtkLekkmytltdsgkqelhdwlirhqpipetvkdefmlkayfissrqeasdlftdqllkrkaklsdlqgsyeklmaspmsfsspdfghylvltkalereknyvswlesilami >5x11_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BACILLUS SUBTILIS PADR IN COMPLEX WITH OPERATOR DNA organism=Bacillus subtilis subsp. spizizenii strain W23 DNA sequence DC(I1):DG(J28) DG(I2):DC(J27) DG(I3):DC(J26) DA(I4):DT(J25) DA(I5):DT(J24) DC(I6):DG(J23) DA(I7):DT(J22) DT(I8):DA(J21) DG(I9):DC(J20) DT(I10):DA(J19) DA(I11):DT(J18) DA(I12):DT(J17) DA(I13):DT(J16) DT(I14):DA(J15) DA(I15):DT(J14) DG(I16):DC(J13) DT(I17):DA(J12) DT(I18):DA(J11) DA(I19):DT(J10) DC(I20):DG(J9) DA(I21):DT(J8) DT(I22):DA(J7) DG(I23):DC(J6) DA(I24):DT(J5) DT(I25):DA(J4) DT(I26):DA(J3) DA(I27):DT(J2) DC(I28):DG(J1) chainA ( 23) TYR20 0 0 0 0 0 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LYS37 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) HIS38 0 0 0 0 0 0 0 10 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER39 0 0 0 0 0 0 0 0 0 6 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN40 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) TYR42 0 0 0 0 0 0 0 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) PRO43 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) LEU65 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 ( 39) LYS37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 40) HIS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 10 0 0 0 0 0 0 0 ( 41) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 5 0 0 0 0 0 0 0 0 0 ( 42) GLN40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 ( 44) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 ( 45) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 67) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 prot.sequence kdpmrvlkyailgllrkgelsgYditsyfkeelgqfwsaKHSQiYPelkkltdegfitfrttiqgtkLekkmytltdsgkqelhdwlirhqpipetvkdefmlkayfissrqeasdlftdqllkrkaklsdlqgsyeklmaspmsfsspdfghylvltkalereknyvswlesilami/dpmrvlkyailgllrkgelsgYditsyfkeelgqfwsaKHSQiYPelkkltdegfitfrttiqgtkLekkmytltdsgkqelhdwlirhqpipetvkdefmlkayfisslsrqeasdlftdqllkrkaklsdlqgsyeklmasmsfsspdfghylvltkalereknyvswlesilamid >5x11_CD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BACILLUS SUBTILIS PADR IN COMPLEX WITH OPERATOR DNA organism=Bacillus subtilis subsp. spizizenii strain W23 DNA sequence DC(M1):DG(N28) DG(M2):DC(N27) DG(M3):DC(N26) DA(M4):DT(N25) DA(M5):DT(N24) DC(M6):DG(N23) DA(M7):DT(N22) DT(M8):DA(N21) DG(M9):DC(N20) DT(M10):DA(N19) DA(M11):DT(N18) DA(M12):DT(N17) DA(M13):DT(N16) DT(M14):DA(N15) DA(M15):DT(N14) DG(M16):DC(N13) DT(M17):DA(N12) DT(M18):DA(N11) DA(M19):DT(N10) DC(M20):DG(N9) DA(M21):DT(N8) DT(M22):DA(N7) DG(M23):DC(N6) DA(M24):DT(N5) DT(M25):DA(N4) DT(M26):DA(N3) DA(M27):DT(N2) DC(M28):DG(N1) DG(J1):DC(I28) DT(J2):DA(I27) DA(J3):DT(I26) DA(J4):DT(I25) DT(J5):DA(I24) DC(J6):DG(I23) DA(J7):DT(I22) DT(J8):DA(I21) DG(J9):DC(I20) DT(J10):DA(I19) DA(J11):DT(I18) DA(J12):DT(I17) DC(J13):DG(I16) DT(J14):DA(I15) DA(J15):DT(I14) DT(J16):DA(I13) DT(J17):DA(I12) DT(J18):DA(I11) DA(J19):DT(I10) DC(J20):DG(I9) DA(J21):DT(I8) DT(J22):DA(I7) DG(J23):DC(I6) DT(J24):DA(I5) DT(J25):DA(I4) DC(J26):DG(I3) DC(J27):DG(I2) DG(J28):DC(I1) chainC ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) HIS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) HIS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rvlkyailgllrkgelsgYditsyfkeelgqfwsakHSqiYpelkkltdegfitfrttiqgtkLekkmytltdsgkqelhdwlirhqpipetvkdefmlkayfisslsrqeasdlftdqllkrkaklsdlqgsyeklmapmsfsspdfghylvltkalereknyvswlesilamid/rvlkyailgllrkgelsgYditsyfkeelgqfwsakHSqiYpelkkltdegfitfrttiqgtkLekkmytltdsgkqelhdwlirhqpipetvkdefmlkayfisslsrqeasdlftdqllkrkaklsdlqgsyeklmaspmsfsspdfghylvltkalereknyvswlesilamid >5x11_EFGH:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BACILLUS SUBTILIS PADR IN COMPLEX WITH OPERATOR DNA organism=Bacillus subtilis subsp. spizizenii strain W23 DNA sequence DC(M1):DG(N28) DG(M2):DC(N27) DG(M3):DC(N26) DA(M4):DT(N25) DA(M5):DT(N24) DC(M6):DG(N23) DA(M7):DT(N22) DT(M8):DA(N21) DG(M9):DC(N20) DT(M10):DA(N19) DA(M11):DT(N18) DA(M12):DT(N17) DA(M13):DT(N16) DT(M14):DA(N15) DA(M15):DT(N14) DG(M16):DC(N13) DT(M17):DA(N12) DT(M18):DA(N11) DA(M19):DT(N10) DC(M20):DG(N9) DA(M21):DT(N8) DT(M22):DA(N7) DG(M23):DC(N6) DA(M24):DT(N5) DT(M25):DA(N4) DT(M26):DA(N3) DA(M27):DT(N2) DC(M28):DG(N1) chainE ( 22) TYR20 0 0 0 0 0 8 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS37 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS38 0 0 0 0 0 0 0 7 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER39 0 0 0 0 0 0 0 0 0 5 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN40 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TYR42 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PRO43 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LEU65 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 ( 38) LYS37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 39) HIS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 10 0 0 0 0 0 0 0 ( 40) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 4 0 0 0 0 0 0 0 0 0 ( 41) GLN40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 ( 66) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 chainG chainH ( 19) TYR20 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) HIS38 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER39 0 0 3 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN40 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) PRO43 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LEU65 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dpmrvlkyailgllrkgelsgYditsyfkeelgqfwsaKHSQiYPelkkltdegfitfrttiqgtkLekkmytltdsgkqelhdwlirhqpipetvkdefmlkayfisslsrqeasdlftdqllkrkaklsdlqgsyeklmasaepmsfsspdfghylvltkalereknyvswlesilami/pmrvlkyailgllrkgelsgYditsyfkeelgqfwsaKHSQiYpelkkltdegfitfrttiqgtkLekkmytltdsgkqelhdwlirhqpipetvkdefmlkayfisslsrqeasdlftdqllkrkaklsdlqgsyeklmapmsfsspdfghylvltkalereknyvswlesilamid/pmrvlkyailgllrkgelsgYditsyfkeelgqfwsaKHSQiYpelkkltdegfitfrttiqgtkLekkmytltdsgkqelhdwlirhqpipetvkdefmlkayfisssrqeasdlftdqllkrkaklsdlqgsyeklmasaepmsfsspdfghylvltkalereknyvswlesila/rvlkyailgllrkgelsgYditsyfkeelgqfwsakHSQiYPelkkltdegfitfrttiqgtkLekkmytltdsgkqelhdwlirhqpipetvkdefmlkayfisslsrqeasdlftdqllkrkaklsdlqgsyeklmsfsspdfghylvltkalereknyvswlesilamid >5x21_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX WITH GPA AND PSEUDOURIDIMYCIN (PUM) organism=? DNA sequence DG(H9):DG(G19) DA(H10):DA(G18) DG(H11):DG(G17) DC(H12):DC(G16) DT(H13):DT(G15) DG(H14):DA(G14) DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) DA(H25):DT(G3) DG(H26):DC(G2) DG(H27):DC(G1) chainC (135) ARG142 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) LYS167 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) TRP171 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ASN187 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) ARG243 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) TYR256 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) LEU260 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ARG266 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ILE325 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ASP326 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) ARG331 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) LEU418 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) ARG422 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (420) VAL427 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (703) ALA705 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (1232) THR1234 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (1236) MET1238 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 5) ARG82 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ILE321 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) GLU324 6 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ASP326 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) SER327 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) PHE332 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpKrgpWidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavaYvygLiadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtreRagfdVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgTqltMrtfhtggvagaaditqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieea/sdpvRqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdEkDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >5x21_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX WITH GPA AND PSEUDOURIDIMYCIN (PUM) organism=? DNA sequence DG(H9):DG(G19) DA(H10):DA(G18) DG(H11):DG(G17) DC(H12):DC(G16) DT(H13):DT(G15) DG(H14):DA(G14) DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) DA(H25):DT(G3) DG(H26):DC(G2) DG(H27):DC(G1) chainD (703) ALA705 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (1232) THR1234 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (1236) MET1238 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgTqltMrtfhtggvagaaditqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieea >5x22_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX WITH GPA AND CMPCPP organism=? DNA sequence DG(H9):DG(G19) DA(H10):DA(G18) DG(H11):DG(G17) DC(H12):DC(G16) DT(H13):DT(G15) DG(H14):DG(G14) DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) DA(H25):DT(G3) DG(H26):DC(G2) DG(H27):DC(G1) chainC (136) ARG142 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) LYS167 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) TRP171 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ASN187 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ARG243 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) TYR256 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) LEU260 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ARG266 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ILE325 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ASP326 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG331 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) LEU418 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) GLU421 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (421) VAL427 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (595) ASP597 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (703) ALA705 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (1024) THR1088 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 (1025) ALA1089 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (1174) MET1238 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 2) ASP79 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG82 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ASP326 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) SER327 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) PHE332 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpKrgpWidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavaYvygLiadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtrERagfdVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsDrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddafnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltMrtfhtggvagaaditqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpvRqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrqienkalrklkyhesrtrklrdfld >5x22_M:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX WITH GPA AND CMPCPP organism=? DNA sequence DG(Q4):DC(R24) DC(Q5):DG(R23) DA(Q6):DT(R22) DT(Q7):DA(R21) DC(Q8):DG(R20) DC(Q9):DG(R19) DG(Q10):DC(R18) DT(Q11):DA(R17) DG(Q12):DC(R16) DA(Q13):DT(R15) DG(Q14):DG(R14) DT(Q15):DT(R13) DC(Q16):DC(R12) DG(Q17):DG(R11) DA(Q18):DA(R10) DG(Q19):DG(R9) chainM (136) ARG142 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 (161) LYS167 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 (165) TRP171 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 (181) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 (237) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 (250) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 (260) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 (319) ILE325 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (320) ASP326 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 (325) ARG331 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (412) LEU418 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (420) ASP426 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (421) VAL427 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpKrgpWidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavaYvygliadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtreRagfDVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask >5x22_MP: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX WITH GPA AND CMPCPP organism=? DNA sequence DG(R9):DG(Q19) DA(R10):DA(Q18) DG(R11):DG(Q17) DC(R12):DC(Q16) DT(R13):DT(Q15) DG(R14):DG(Q14) DT(R15):DA(Q13) DC(R16):DG(Q12) DA(R17):DT(Q11) DC(R18):DG(Q10) DG(R19):DC(Q9) DG(R20):DC(Q8) DA(R21):DT(Q7) DT(R22):DA(Q6) DG(R23):DC(Q5) DC(R24):DG(Q4) chainM (136) ARG142 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 (161) LYS167 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 (165) TRP171 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 (181) ASN187 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ARG243 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) TYR256 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ARG266 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ILE325 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (320) ASP326 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (325) ARG331 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (412) LEU418 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (420) ASP426 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (421) VAL427 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 chainP ( 2) ASP79 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG82 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ILE321 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) GLU324 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ASP326 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) SER327 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) PHE332 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpKrgpWidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavaYvygliadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtreRagfDVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/sDpvRqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdEkDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >5x2g_A: title=CRYSTAL STRUCTURE OF CAMPYLOBACTER JEJUNI CAS9 IN COMPLEX WITH SGRNA AND TARGET DNA (AGAAACC PAM) organism=? DNA sequence DC(C-7):DG(D8) DG(C-6):DC(D7) DG(C-5):DC(D6) DT(C-4):DA(D5) DT(C-3):DA(D4) DT(C-2):DA(D3) DC(C-1):DG(D2) DT(C0):DA(D1) chainA (631) ARG866 22 15 0 0 0 0 0 0 (634) LYS869 0 2 0 0 0 0 0 0 (678) THR913 0 0 0 1 3 0 0 0 (680) SER915 0 0 1 7 0 0 0 0 (681) THR916 0 6 2 0 0 0 0 0 (715) LYS950 0 0 0 2 0 0 0 0 (716) SER951 0 0 5 2 0 0 0 0 prot.sequence marilafdigissigwafsendelkdcgvriftkgeslalprrlarsarkrlarrkarlnhlkhlianefklnyedyqsfdeslakaykgslispyelrfralnellskqdfarvilhiakrrgyddiknkekgailkaikqneeklanyqsvgeylykeyfqkfkenskeftnvrnkkesyerciaqsflkdelklifkkqrefgfsfskkfeeevlsvafykralkdfshlvgncsfftdekrapknsplafmfvaltriinllnnlkntegilytkddlnallnevlkngtltykqtkkllglsddyefkgekgtyfiefkkykefisqddlneiakditlikdeiklkkalakydlnqnqidslsklefkdhlnisfkalklvtplmlegkkydeacnelnlkvainedkkdflpafnetyykdevtnpvvlraikeyrkvlnallkkygkvhkinielgggyiarlvlnytkdyldflplsdvhveaksgmltsalrhtwgfsakdrnnhlhhaidaviiayrqkvldkideifvskperkkpsgalheetfrkeeefyqsyggkegvlkalelgkirkvngkivkngdmfrvdifkhkktnkfyavpiytmdfalkvlpnkavaRskKgeikdwilmdenyefcfslykdsliliqtkdmqepefvyynafTsSTvslivskhdnkfetlsknqkilfknanekeviaKSigiqnlkvfekyivsalgevtkaefrqredfkk >5x2h_A: title=CRYSTAL STRUCTURE OF CAMPYLOBACTER JEJUNI CAS9 IN COMPLEX WITH SGRNA AND TARGET DNA (AGAAACA PAM) organism=? DNA sequence DC(C-7):DG(D8) DT(C-6):DA(D7) DG(C-5):DC(D6) DT(C-4):DA(D5) DT(C-3):DA(D4) DT(C-2):DA(D3) DC(C-1):DG(D2) DT(C0):DA(D1) chainA (628) ARG866 18 9 0 0 0 0 0 0 (675) THR913 0 0 0 1 3 0 0 0 (677) SER915 0 0 1 7 0 0 0 0 (678) THR916 0 6 2 0 0 0 0 0 (680) SER918 0 1 0 0 0 0 0 0 (712) LYS950 0 0 0 2 0 0 0 0 (713) SER951 0 3 7 2 0 0 0 0 prot.sequence marilafdigissigwafsendelkdcgvrifteslalprrlarsarkrlarrkarlnhlkhlianefklnyedyqsfdeslakaykgslispyelrfralnellskqdfarvilhiakrrgyddiknkekgailkaikqneeklanyqsvgeylykeyfqkfkenskeftnvrnkkesyerciaqsflkdelklifkkqrefgfsfskkfeeevlsvafykralkdfshlvgncsfftdekrapknsplafmfvaltriinllnnlkntegilytkddlnallnevlkngtltykqtkkllglsddyefkgekgtyfiefkkykefisqddlneiakditlikdeiklkkalakydlnqnqidslsklefkdhlnisfkalklvtplmlegkkydeacnelnlkvainedkkdflpafnetyykdevtnpvvlraikeyrkvlnallkkygkvhkinielggyiarlvlnytkdyldflplsdvhveaksgmltsalrhtwgfsakdrnnhlhhaidaviiayrqkvldkideifvskperkkpsgalheetfrkeeefyqsyggkegvlkalelgkirkvngkivkngdmfrvdifkhkktnkfyavpiytmdfalkvlpnkavaRskkgeikdwilmdenyefcfslykdsliliqtkdmqepefvyynafTsSTvSlivskhdnkfetlsknqkilfknanekeviaKSigiqnlkvfekyivsalgevtkaefrqredfkk >5x5l_AE:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF RESPONSE REGULATOR ADER DNA BINDING DOMAIN IN COMPLEX WITH AN INTERCISTRONIC REGION organism=ACINETOBACTER BAUMANNII DNA sequence DT(G1):DA(F24) DC(G2):DG(F23) DT(G3):DA(F22) DC(G4):DG(F21) DC(G5):DG(F20) DA(G6):DT(F19) DC(G7):DG(F18) DA(G8):DT(F17) DC(G9):DG(F16) DT(G10):DA(F15) DT(G11):DA(F14) DA(G12):DT(F13) DC(G13):DG(F12) DT(G14):DA(F11) DC(G15):DG(F10) DC(G16):DG(F9) DA(G17):DT(F8) DC(G18):DG(F7) DA(G19):DT(F6) DC(G20):DG(F5) DT(G21):DA(F4) DT(G22):DA(F3) DT(G23):DA(F2) DA(G24):DT(F1) chainA ( 60) ARG205 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) THR206 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASP208 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER209 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) HIS210 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) SER212 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) LYS213 0 0 1 5 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG231 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 64) ARG205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 65) THR206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 67) ASP208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 68) SER209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 ( 69) HIS210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 71) SER212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 72) LYS213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 5 0 0 0 0 0 0 0 ( 90) ARG231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 4 0 prot.sequence klyknieidtdthsvyihkillnltlteykiisfmidqphkvftrgelmnhcmnsdaleRTvDSHvSKlrkkleeqgifqmlinvRgvgyrldnp/nklyknieidtdthsvyihenkkillnltlteykiisfmidqphkvftrgelmnhcmnsdaleRTvDSHvSKlrkkleeqgifqmlinvRgvgyrldn >5x5l_BH:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF RESPONSE REGULATOR ADER DNA BINDING DOMAIN IN COMPLEX WITH AN INTERCISTRONIC REGION organism=ACINETOBACTER BAUMANNII DNA sequence DT(C1):DA(D24) DA(C2):DT(D23) DA(C3):DT(D22) DA(C4):DT(D21) DG(C5):DC(D20) DT(C6):DA(D19) DG(C7):DC(D18) DT(C8):DA(D17) DG(C9):DC(D16) DG(C10):DC(D15) DA(C11):DT(D14) DG(C12):DC(D13) DT(C13):DA(D12) DA(C14):DT(D11) DA(C15):DT(D10) DG(C16):DC(D9) DT(C17):DA(D8) DG(C18):DC(D7) DT(C19):DA(D6) DG(C20):DC(D5) DG(C21):DC(D4) DA(C22):DT(D3) DG(C23):DC(D2) DA(C24):DT(D1) chainB ( 57) ARG205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 58) THR206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 ( 60) ASP208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 61) SER209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 ( 64) SER212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 65) LYS213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 5 0 0 0 ( 83) ARG231 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 chainH ( 60) ARG205 0 0 0 0 6 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) THR206 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASP208 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER209 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) SER212 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) LYS213 0 0 0 0 0 0 0 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG231 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nklyknietdthsvyillnltlteykiisfmidqphkvftrgelmnhcmndsdaleRTvDShvSKlrkkleeqgifqmlinvRgvgyrldnplav/nklyknieidtdthsvyihsillnltlteykiisfmidqphkvftrgelmnhcmsdaleRTvDShvSKlrkkleeqgifqmlinvRgvgyrldnp >5x5l_H:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF RESPONSE REGULATOR ADER DNA BINDING DOMAIN IN COMPLEX WITH AN INTERCISTRONIC REGION organism=ACINETOBACTER BAUMANNII DNA sequence DT(C1):DA(D24) DA(C2):DT(D23) DA(C3):DT(D22) DA(C4):DT(D21) DG(C5):DC(D20) DT(C6):DA(D19) DG(C7):DC(D18) DT(C8):DA(D17) DG(C9):DC(D16) DG(C10):DC(D15) DA(C11):DT(D14) DG(C12):DC(D13) DT(C13):DA(D12) DA(C14):DT(D11) DA(C15):DT(D10) DG(C16):DC(D9) DT(C17):DA(D8) DG(C18):DC(D7) DT(C19):DA(D6) DG(C20):DC(D5) DG(C21):DC(D4) DA(C22):DT(D3) DG(C23):DC(D2) DA(C24):DT(D1) chainH ( 60) ARG205 0 0 0 0 6 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) THR206 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASP208 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER209 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) SER212 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) LYS213 0 0 0 0 0 0 0 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG231 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nklyknieidtdthsvyihsillnltlteykiisfmidqphkvftrgelmnhcmsdaleRTvDShvSKlrkkleeqgifqmlinvRgvgyrldnp >5x6d_GH:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PRFA-DNA BINARY COMPLEX organism=Listeria monocytogenes DNA sequence DG(K2):DC(L29) DT(K3):DA(L28) DA(K4):DT(L27) DG(K5):DC(L26) DG(K6):DC(L25) DC(K7):DG(L24) DA(K8):DT(L23) DT(K9):DA(L22) DT(K10):DA(L21) DA(K11):DT(L20) DA(K12):DT(L19) DC(K13):DG(L18) DA(K14):DT(L17) DT(K15):DA(L16) DT(K16):DA(L15) DT(K17):DA(L14) DG(K18):DC(L13) DT(K19):DA(L12) DT(K20):DA(L11) DA(K21):DT(L10) DA(K22):DT(L9) DC(K23):DG(L8) DG(K24):DC(L7) DA(K25):DT(L6) DC(K26):DG(L5) DG(K27):DC(L4) DA(K28):DT(L3) DT(K29):DA(L2) chainG (180) HIS182 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) SER184 0 0 0 0 0 0 0 2 3 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ALA185 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG188 0 0 0 0 0 0 0 0 0 0 5 17 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 2 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 6 0 0 0 0 0 0 0 0 0 0 prot.sequence aqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvsRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln/naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >5x6d_MN:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PRFA-DNA BINARY COMPLEX organism=Listeria monocytogenes DNA sequence DA(O2):DT(P29) DT(O3):DA(P28) DC(O4):DG(P27) DG(O5):DC(P26) DT(O6):DA(P25) DC(O7):DG(P24) DG(O8):DC(P23) DT(O9):DA(P22) DT(O10):DA(P21) DA(O11):DT(P20) DA(O12):DT(P19) DC(O13):DG(P18) DA(O14):DT(P17) DA(O15):DT(P16) DA(O16):DT(P15) DT(O17):DA(P14) DG(O18):DC(P13) DT(O19):DA(P12) DT(O20):DA(P11) DA(O21):DT(P10) DA(O22):DT(P9) DT(O23):DA(P8) DG(O24):DC(P7) DC(O25):DG(P6) DC(O26):DG(P5) DT(O27):DA(P4) DA(O28):DT(P3) DC(O29):DG(P2) chainM (180) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 (181) SER183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (182) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 4 1 0 0 0 0 0 0 0 (183) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (185) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 (186) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 3 0 0 0 0 0 0 0 0 0 0 chainN (181) HIS182 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) SER183 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 2 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 5 8 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHSSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln/naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHSSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >5x6d_N:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PRFA-DNA BINARY COMPLEX organism=Listeria monocytogenes DNA sequence DG(P2):DC(O29) DT(P3):DA(O28) DA(P4):DT(O27) DG(P5):DC(O26) DG(P6):DC(O25) DC(P7):DG(O24) DA(P8):DT(O23) DT(P9):DA(O22) DT(P10):DA(O21) DA(P11):DT(O20) DA(P12):DT(O19) DC(P13):DG(O18) DA(P14):DT(O17) DT(P15):DA(O16) DT(P16):DA(O15) DT(P17):DA(O14) DG(P18):DC(O13) DT(P19):DA(O12) DT(P20):DA(O11) DA(P21):DT(O10) DA(P22):DT(O9) DC(P23):DG(O8) DG(P24):DC(O7) DA(P25):DT(O6) DC(P26):DG(O5) DG(P27):DC(O4) DA(P28):DT(O3) DT(P29):DA(O2) chainN (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (182) SER183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 2 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 8 5 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHSSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >5x6e_EF:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PRFA-DNA BINARY COMPLEX organism=Listeria monocytogenes DNA sequence DA(G2):DT(H29) DT(G3):DA(H28) DC(G4):DG(H27) DG(G5):DC(H26) DT(G6):DA(H25) DC(G7):DG(H24) DG(G8):DC(H23) DT(G9):DA(H22) DT(G10):DA(H21) DA(G11):DT(H20) DA(G12):DT(H19) DC(G13):DG(H18) DA(G14):DT(H17) DA(G15):DT(H16) DA(G16):DT(H15) DT(G17):DA(H14) DG(G18):DC(H13) DT(G19):DA(H12) DT(G20):DA(H11) DA(G21):DT(H10) DA(G22):DT(H9) DT(G23):DA(H8) DG(G24):DC(H7) DC(G25):DG(H6) DC(G26):DG(H5) DT(G27):DA(H4) DA(G28):DT(H3) DC(G29):DG(H2) chainE (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 (182) SER183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 3 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 14 6 0 0 0 0 0 0 0 0 0 0 chainF (181) HIS182 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 3 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 12 14 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHSSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln/naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >5x6e_MN:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PRFA-DNA BINARY COMPLEX organism=Listeria monocytogenes DNA sequence DA(O2):DT(P29) DT(O3):DA(P28) DC(O4):DG(P27) DG(O5):DC(P26) DT(O6):DA(P25) DC(O7):DG(P24) DG(O8):DC(P23) DT(O9):DA(P22) DT(O10):DA(P21) DA(O11):DT(P20) DA(O12):DT(P19) DC(O13):DG(P18) DA(O14):DT(P17) DA(O15):DT(P16) DA(O16):DT(P15) DT(O17):DA(P14) DG(O18):DC(P13) DT(O19):DA(P12) DT(O20):DA(P11) DA(O21):DT(P10) DA(O22):DT(P9) DT(O23):DA(P8) DG(O24):DC(P7) DC(O25):DG(P6) DC(O26):DG(P5) DT(O27):DA(P4) DA(O28):DT(P3) DC(O29):DG(P2) chainM (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 (182) SER183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 3 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 9 6 0 0 0 0 0 0 0 0 0 0 chainN (170) MET171 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) HIS182 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 6 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 4 7 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHSSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln/naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltMqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >5x6e_N:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PRFA-DNA BINARY COMPLEX organism=Listeria monocytogenes DNA sequence DA(O2):DT(P29) DT(O3):DA(P28) DC(O4):DG(P27) DG(O5):DC(P26) DT(O6):DA(P25) DC(O7):DG(P24) DG(O8):DC(P23) DT(O9):DA(P22) DT(O10):DA(P21) DA(O11):DT(P20) DA(O12):DT(P19) DC(O13):DG(P18) DA(O14):DT(P17) DA(O15):DT(P16) DA(O16):DT(P15) DT(O17):DA(P14) DG(O18):DC(P13) DT(O19):DA(P12) DT(O20):DA(P11) DA(O21):DT(P10) DA(O22):DT(P9) DT(O23):DA(P8) DG(O24):DC(P7) DC(O25):DG(P6) DC(O26):DG(P5) DT(O27):DA(P4) DA(O28):DT(P3) DC(O29):DG(P2) chainN (170) MET171 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) HIS182 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 6 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 4 7 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltMqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >5x6g_A:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD5-MH1/PALINDROMIC SBE DNA COMPLEX organism=Mus musculus DNA sequence DT(C2):DA(D16) DC(C3):DG(D15) DA(C4):DT(D14) DG(C5):DC(D13) DT(C6):DA(D12) DC(C7):DG(D11) DT(C8):DA(D10) DA(C9):DT(D9) DG(C10):DC(D8) DA(C11):DT(D7) DC(C12):DG(D6) DA(C13):DT(D5) DT(C14):DA(D4) DA(C15):DT(D3) chainA ( 65) ARG75 0 0 0 0 0 0 0 0 0 1 10 15 0 0 ( 67) GLN77 0 0 0 0 0 0 5 9 4 0 0 0 0 0 ( 70) HIS80 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 72) LYS82 0 0 0 0 0 0 0 5 10 5 0 0 0 0 prot.sequence tspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprsldgRlQvsHrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrve >5x6g_AB:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD5-MH1/PALINDROMIC SBE DNA COMPLEX organism=Mus musculus DNA sequence DT(C2):DA(D16) DC(C3):DG(D15) DA(C4):DT(D14) DG(C5):DC(D13) DT(C6):DA(D12) DC(C7):DG(D11) DT(C8):DA(D10) DA(C9):DT(D9) DG(C10):DC(D8) DA(C11):DT(D7) DC(C12):DG(D6) DA(C13):DT(D5) DT(C14):DA(D4) DA(C15):DT(D3) chainA ( 65) ARG75 0 0 0 0 0 0 0 0 0 1 10 15 0 0 ( 67) GLN77 0 0 0 0 0 0 5 9 4 0 0 0 0 0 ( 70) HIS80 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 72) LYS82 0 0 0 0 0 0 0 5 10 5 0 0 0 0 chainB ( 65) ARG75 0 0 12 8 1 0 0 0 0 0 0 0 0 0 ( 67) GLN77 0 0 0 0 0 3 8 5 0 0 0 0 0 0 ( 72) LYS82 0 0 0 0 8 7 4 0 0 0 0 0 0 0 prot.sequence tspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprsldgRlQvsHrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrve/tspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprsldgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrves >5x6h_B:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD5-MH1/GC-BRE DNA COMPLEX organism=Mus musculus DNA sequence DG(E1) DT(E2) DA(E3) DT(E4) DG(E5) DG(E6) DC(E7) DG(E8) DC(E9) DC(E10) DA(E11) DT(E12) DA(E13) DC(E14) chainB ( 55) ASP73 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 57) ARG75 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 59) GLN77 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 64) LYS82 0 0 0 0 0 0 2 4 1 0 0 0 0 0 prot.sequence spavkrlleekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrves >5x6m_AB:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD5-MH1 IN COMPLEX WITH A COMPOSITE DNA SEQUENCE organism=Mus musculus DNA sequence DT(C2):DA(D22) DC(C3):DG(D21) DA(C4):DT(D20) DG(C5):DC(D19) DA(C6):DT(D18) DC(C7):DG(D17) DT(C8):DA(D16) DG(C9):DC(D15) DC(C10):DG(D14) DC(C11):DG(D13) DG(C12):DC(D12) DG(C13):DC(D11) DC(C14):DG(D10) DA(C15):DT(D9) DG(C16):DC(D8) DT(C17):DA(D7) DC(C18):DG(D6) DT(C19):DA(D5) DA(C20):DT(D4) DT(C21):DA(D3) DA(C22):DT(D2) chainB ( 61) ASP73 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 63) ARG75 0 0 0 0 0 0 0 0 0 7 15 2 0 0 0 0 0 0 0 0 0 ( 65) GLN77 0 0 0 0 0 0 0 0 0 0 0 0 2 7 3 0 0 0 0 0 0 ( 70) LYS82 0 0 0 0 0 0 0 0 0 0 0 7 5 1 0 0 0 0 0 0 0 chainA ( 62) ASP73 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG75 0 0 0 0 2 15 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) GLN77 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LYS82 0 0 0 8 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrves/pavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrvesp >5x6m_EF:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD5-MH1 IN COMPLEX WITH A COMPOSITE DNA SEQUENCE organism=Mus musculus DNA sequence DT(G2):DA(H22) DC(G3):DG(H21) DA(G4):DT(H20) DG(G5):DC(H19) DA(G6):DT(H18) DC(G7):DG(H17) DT(G8):DA(H16) DG(G9):DC(H15) DC(G10):DG(H14) DC(G11):DG(H13) DG(G12):DC(H12) DG(G13):DC(H11) DC(G14):DG(H10) DA(G15):DT(H9) DG(G16):DC(H8) DT(G17):DA(H7) DC(G18):DG(H6) DT(G19):DA(H5) DA(G20):DT(H4) DT(G21):DA(H3) DA(G22):DT(H2) chainE ( 61) ASP73 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 63) ARG75 0 0 0 0 0 0 0 0 0 9 13 2 0 0 0 0 0 0 0 0 0 ( 65) GLN77 0 0 0 0 0 0 0 0 0 0 0 0 3 15 6 0 0 0 0 0 0 ( 70) LYS82 0 0 0 0 0 0 0 0 0 0 1 6 8 7 0 0 0 0 0 0 0 chainF ( 61) ASP73 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG75 0 0 0 0 2 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) GLN77 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LYS82 0 0 0 7 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrves/pavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrves >5x6m_F:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD5-MH1 IN COMPLEX WITH A COMPOSITE DNA SEQUENCE organism=Mus musculus DNA sequence DT(G2):DA(H22) DC(G3):DG(H21) DA(G4):DT(H20) DG(G5):DC(H19) DA(G6):DT(H18) DC(G7):DG(H17) DT(G8):DA(H16) DG(G9):DC(H15) DC(G10):DG(H14) DC(G11):DG(H13) DG(G12):DC(H12) DG(G13):DC(H11) DC(G14):DG(H10) DA(G15):DT(H9) DG(G16):DC(H8) DT(G17):DA(H7) DC(G18):DG(H6) DT(G19):DA(H5) DA(G20):DT(H4) DT(G21):DA(H3) DA(G22):DT(H2) chainF ( 61) ASP73 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG75 0 0 0 0 2 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) GLN77 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LYS82 0 0 0 7 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrves >5x7x_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING H3.3 AT 2.18 ANGSTROM RESOLUTION organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/rakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/kkphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtAvrlllpgelakhavsegtkavtkyts >5x7x_B:Histone-fold; title=THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING H3.3 AT 2.18 ANGSTROM RESOLUTION organism=? DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >5xf3_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE WITH AN ADDUCT OF A BINUCLEAR RAPTA (RU- ARENE-PHOSPHAADAMANTANE) COMPOUND HAVING A 1,2- DIPHENYLETHYLENEDIAMINE LINKER (R,R-CONFIGURATION) organism=HOMO SAPIENS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 9) ILE36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/rsrkesysiyvykvlkqvhpdtgiSskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/rsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >5xf3_H:Histone-fold; title=NUCLEOSOME CORE PARTICLE WITH AN ADDUCT OF A BINUCLEAR RAPTA (RU- ARENE-PHOSPHAADAMANTANE) COMPOUND HAVING A 1,2- DIPHENYLETHYLENEDIAMINE LINKER (R,R-CONFIGURATION) organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainH ( 9) ILE36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >5xf4_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE WITH AN ADDUCT OF A BINUCLEAR RAPTA (RU- ARENE-PHOSPHAADAMANTANE) COMPOUND HAVING A 1,2- DIPHENYLETHYLENEDIAMINE LINKER (S,S-CONFIGURATION) organism=HOMO SAPIENS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/rsrkesysiyvykvlkqvhpdtgiSskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >5xf4_H:Histone-fold; title=NUCLEOSOME CORE PARTICLE WITH AN ADDUCT OF A BINUCLEAR RAPTA (RU- ARENE-PHOSPHAADAMANTANE) COMPOUND HAVING A 1,2- DIPHENYLETHYLENEDIAMINE LINKER (S,S-CONFIGURATION) organism=HOMO SAPIENS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >5xf5_A:Histone-fold; title=NUCLEOSOME CORE PARTICLE WITH AN ADDUCT OF A BINUCLEAR RAPTA (RU- ARENE-PHOSPHAADAMANTANE) COMPOUND HAVING A 1,2- DIPHENYLETHYLENEDIAMINE LINKER (R,S-CONFIGURATION) organism=HOMO SAPIENS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >5xf5_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE WITH AN ADDUCT OF A BINUCLEAR RAPTA (RU- ARENE-PHOSPHAADAMANTANE) COMPOUND HAVING A 1,2- DIPHENYLETHYLENEDIAMINE LINKER (R,S-CONFIGURATION) organism=HOMO SAPIENS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/rsrkesysiyvykvlkqvhpdtgiSskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >5xf6_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE WITH AN ADDUCT OF A BINUCLEAR RAPTA (RU- ARENE-PHOSPHAADAMANTANE) COMPOUND HAVING AN ETHYLENEDIAMINE LINKER organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-33):DC(J34) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DA(I21):DC(J-20) DT(I22):DT(J-21) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DA(J-52) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >5xf6_G:Histone-fold; title=NUCLEOSOME CORE PARTICLE WITH AN ADDUCT OF A BINUCLEAR RAPTA (RU- ARENE-PHOSPHAADAMANTANE) COMPOUND HAVING AN ETHYLENEDIAMINE LINKER organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DA(J-52):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DT(J-21):DT(I22) DC(J-20):DA(I21) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J34):DG(I-33) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk >5xfp_B:FYVE/PHD_zinc_finger;Tudor/PWWP/MBT; title=BINARY COMPLEX OF PHF1 AND A DOUBLE STRANDED DNA organism=Homo sapiens DNA sequence DG(D1):DC(C12) DG(D2):DC(C11) DG(D3):DC(C10) DC(D4):DG(C9) DG(D5):DC(C8) DG(D6):DC(C7) DC(D7):DG(C6) DC(D8):DG(C5) DG(D9):DC(C4) DC(D10):DG(C3) DC(D11):DG(C2) DC(D12):DG(C1) chainB (288) LYS323 0 0 0 7 14 19 0 0 0 0 0 0 (289) LYS324 0 7 7 8 0 0 0 0 0 0 0 0 prot.sequence rlwegqdvlarwtdgllylgtikkvdsarevclvqfeddsqflvlwkdispaalpgeellccvcrsetvvpgnrlvscekcrhayhqdchvprapapswvcrqcvfaiatkrggalkkgpyaramlgmklslpyglkgldwdaghlsnrqqsycycggpgewnlkmlqcrsclqwfheactqclskpllygdrfyefeccvcrggpekvrrlqlrwvdvahlvlyhlsvcckkkyfdfdreilpftsenwdslllgelsdtpkgerssrllsalnshkdrfisgreiKKrkclfglharmpppve >5xfq_A:FYVE/PHD_zinc_finger;Tudor/PWWP/MBT; title=TERNARY COMPLEX OF PHF1, A DNA DUPLEX AND A HISTONE PEPTIDE organism=Mus musculus DNA sequence DG(D1):DC(C12) DG(D2):DC(C11) DG(D3):DC(C10) DC(D4):DG(C9) DG(D5):DC(C8) DG(D6):DC(C7) DC(D7):DG(C6) DC(D8):DG(C5) DG(D9):DC(C4) DC(D10):DG(C3) DC(D11):DG(C2) DC(D12):DG(C1) chainA (296) LYS323 0 0 0 0 0 0 11 12 12 0 0 0 (297) LYS324 0 0 0 0 0 0 0 0 11 8 3 0 prot.sequence rprlwegqdvlarwtdgllylgtikkvdsarevclvqfeddsqflvlwkdispaalpgeellccvcrsetvvpgnrlvscekcrhayhqdchvprapapgegegaswvcrqcvfaiatkrggalkkgpyaramlgmklslpyglkgldwdaghlsnrqqsycycggpgewnlkmlqcrsclqwfheactqclskpllygdrfyefeccvcrggpekvrrlqlrwvdvahlvlyhlsvcckkkyfdfdreilpftsenwdslllgelsdtpkgerssqllsalnshkdrfisgreiKKrkclfglhartpppv >5xfr_B:FYVE/PHD_zinc_finger;Tudor/PWWP/MBT; title=TERNARY COMPLEX OF MTF2, DNA AND HISTONE organism=Homo sapiens DNA sequence DG(F1):DC(E12) DG(F2):DC(E11) DG(F3):DC(E10) DC(F4):DG(E9) DG(F5):DC(E8) DG(F6):DC(E7) DC(F7):DG(E6) DC(F8):DG(E5) DG(F9):DC(E4) DC(F10):DG(E3) DC(F11):DG(E2) DC(F12):DG(E1) chainB (278) LYS338 0 0 0 0 0 0 14 12 5 0 0 0 (279) LYS339 0 0 0 0 0 0 0 0 11 8 5 0 prot.sequence kfeegqdvlarwsdglfylgtikkinilkqscfiifedsskswvlwkdiqtcticqeeyseapnemvicdkcgqgyhqlchtphidckwlcrqcvfatttkrggalkkgpnakalqvmkqtlpysvadlewdaghktnvqqcycycggpgdwylkmlqcckckqwfheacvqclqkpmlfgdrfytficsvcssgpeylkrlplqwvdiahlclynlsvihkkkyfdselelmtyinenwdrlhpgeladtpkseryehvlealndyktmfmsgkeiKKkkhlfglrirvppvppnva >5xh6_A: title=CRYSTAL STRUCTURE OF THE ACIDAMINOCOCCUS SP. BV3L6 CPF1 RVR VARIANT IN COMPLEX WITH CRRNA AND TARGET DNA (TATA PAM) organism=Acidaminococcus sp. (strain BV3L6) / Acidaminococcus sp. (strain BV3L6) DNA sequence DT(C1):DA(D-1) DA(C2):DT(D-2) DT(C3):DA(D-3) DA(C4):DT(D-4) DG(C5):DC(D-5) DG(C6):DC(D-6) DA(C7):DT(D-7) DC(C8):DG(D-8) DT(C9):DA(D-9) DG(C10):DC(D-10) chainA (167) THR167 0 0 0 1 0 0 0 0 0 0 (539) THR539 0 0 0 1 0 0 0 0 0 0 (548) VAL548 0 1 1 0 0 0 0 0 0 0 (552) ARG552 0 5 9 0 0 0 0 0 0 0 (599) PRO599 2 0 0 0 0 0 0 0 0 0 (603) LYS603 20 0 0 0 0 0 0 0 0 0 (604) MET604 3 4 0 0 0 0 0 0 0 0 (607) LYS607 3 8 6 2 0 0 0 0 0 0 (784) GLN784 1 0 0 0 0 0 0 0 0 0 prot.sequence mtqfegftnlyqvsktlrfelipqgktlkhiqeqgfieedkarndhykelkpiidriyktyadqclqlvqldwenlsaaidsyrkekteetrnalieeqatyrnaihdyfigrtdnltdainkrhaeiykglfkaelfngkvlkqlgtvtttehenallrsfdkftTyfsgfyenrknvfsaedistaiphrivqdnfpkfkenchiftrlitavpslrefenvkkaigifvstsieevfsfpfynqlltqtqidlynqllggisreagtekikglnevlnlaiqkndetahiiaslphrfiplfkqilsdrntlsfileefksdeeviqsfckyktllrnenvletaealfnelnsidlthifishkkletissalcdhwdtlrnalyerriseltgkitksakekvqrslkhedinlqeiisaagkelseafkqktseilshahaaldqplpttlkkqeekeilksqldsllglyhlldwfavdesnevdpefsarltgiklemepslsfynkarnyatkkpysvekfklnfqmpTlargwdvnVeknRgailfvknglyylgimpkqkgrykalsfeptektsegfdkmyydyfPdaaKMipKcstqlkavtahfqthttpillsnnfiepleitkeiydlnnpekepkkfqtayakktgdqkgyrealckwidftrdflskytkttsidlsslrpssqykdlgeyyaelnpllyhisfqriaekeimdavetgklylfqiynkdfakghhgkpnlhtlywtglfspenlaktsiklngQaelfyrpksrmmahrlgekmlnkklkdqktpipdtlyqelydyvnhrlshdlsdearallpnvitkevsheiikdrrftsdkfffhvpitlnyqaanspskfnqrvnaylkehpetpiigidrgernliyitvidstgkileqrslntiqqfdyqkkldnrekervaarqawsvvgtikdlkqgylsqviheivdlmihyqavvvlenlnfavyqqfekmlidklnclvlkdypaekvggvlnpyqltdqftsfakmgtqsgflfyvpapytskidpltgfvdpfvwktiknhesrkhflegfdflhydvktgdfilhfkmnrnlsfqrglpgfmpawdivfeknetqfdakgtpfiagkrivpyrdlypanelialleekgivfrdgsnilpkllenddshaidtmvalirsvlqmrnsnaatgedyinspvrdlngvcfdsrfqnpewpmdadangayhialkgqlllnhlkeskdlklqngisnqdwlayiqelrn >5xh7_A: title=CRYSTAL STRUCTURE OF THE ACIDAMINOCOCCUS SP. BV3L6 CPF1 RR VARIANT IN COMPLEX WITH CRRNA AND TARGET DNA (TCCA PAM) organism=Acidaminococcus sp. (strain BV3L6) / Acidaminococcus sp. (strain BV3L6) DNA sequence DT(C1):DA(D-1) DG(C2):DC(D-2) DG(C3):DC(D-3) DA(C4):DT(D-4) DG(C5):DC(D-5) DG(C6):DC(D-6) DA(C7):DT(D-7) DC(C8):DG(D-8) DT(C9):DA(D-9) DG(C10):DC(D-10) chainA (167) THR167 0 0 0 1 0 0 0 0 0 0 (539) THR539 0 0 0 1 0 0 0 0 0 0 (542) ARG542 16 13 10 0 0 0 0 0 0 0 (548) LYS548 0 3 11 1 0 0 0 0 0 0 (599) PRO599 2 0 0 0 0 0 0 0 0 0 (603) LYS603 16 0 0 0 0 0 0 0 0 0 (604) MET604 3 6 0 0 0 0 0 0 0 0 (607) ARG607 0 8 2 4 0 0 0 0 0 0 prot.sequence mtqfegftnlyqvsktlrfelipqgktlkhiqeqgfieedkarndhykelkpiidriyktyadqclqlvqldwenlsaaidsyrkekteetrnalieeqatyrnaihdyfigrtdnltdainkrhaeiykglfkaelfngkvlkqlgtvtttehenallrsfdkftTyfsgfyenrknvfsaedistaiphrivqdnfpkfkenchiftrlitavpslrehfenvkkaigifvstsieevfsfpfynqlltqtqidlynqllggisreagtekikglnevlnlaiqkndetahiiaslphrfiplfkqilsdrntlsfileefksdeeviqsfckyktllrnenvletaealfnelnsidlthifishkkletissalcdhwdtlrnalyerriseltgkitksakekvqrslkhedinlqeiisaagkelseafkqktseilshahaaldqplpttlkkqeekeilksqldsllglyhlldwfavdesnevdpefsarltgiklemepslsfynkarnyatkkpysvekfklnfqmpTlaRgwdvnKeknngailfvknglyylgimpkqkgrykalsfeptektsegfdkmyydyfPdaaKMipRcstqlkavtahfqthttpillsnnfiepleitkeiydlnnpekepkkfqtayakktgdqkgyrealckwidftrdflskytkttsidlsslrpssqykdlgeyyaelnpllyhisfqriaekeimdavetgklylfqiynkdfakghhgkpnlhtlywtglfspenlaktsiklngqaelfyrpksrmmahrlgekmlnkklkdqktpipdtlyqelydyvnhrlshdlsdearallpnvitkevsheiikdrrftsdkfffhvpitlnyqaanspskfnqrvnaylkehpetpiigidrgernliyitvidstgkileqrslntiqqfdyqkkldnrekervaarqawsvvgtikdlkqgylsqviheivdlmihyqavvvlenlnfavyqqfekmlidklnclvlkdypaekvggvlnpyqltdqftsfakmgtqsgflfyvpapytskidpltgfvdpfvwktiknhesrkhflegfdflhydvktgdfilhfkmnrnlsfqrglpgfmpawdivfeknetqfdakgtpfiagkrivpyrdlypanelialleekgivfrdgsnilpkllenddshaidtmvalirsvlqmrnsnaatgedyinspvrdlngvcfdsrfqnpewpmdadangayhialkgqlllnhlkeskdlklqngisnqdwlayiqelrn >5xm0_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE MOUSE NUCLEOSOME STRUCTURE CONTAINING H2A, H2B TYPE3-A, H3.3, AND H4 organism=MUS MUSCULUS DNA sequence DA(J147):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 9) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rgrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytss/pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiaseasrlahynkrstitsrevQtavrlllpgelakhavsegtkavtkytss >5xm0_E:Histone-fold; title=THE MOUSE NUCLEOSOME STRUCTURE CONTAINING H2A, H2B TYPE3-A, H3.3, AND H4 organism=MUS MUSCULUS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DA(J147) chainE ( 2) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger >5xm1_A:Histone-fold; title=THE MOUSE NUCLEOSOME STRUCTURE CONTAINING H2A, H2B TYPE3-A, H3MM7, AND H4 organism=? DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkatellirklpfqrlvreiaqdfktdlrfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger >5xm1_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE MOUSE NUCLEOSOME STRUCTURE CONTAINING H2A, H2B TYPE3-A, H3MM7, AND H4 organism=MUS MUSCULUS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 2) HIS39 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkatellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rgRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytss/pHRyrpgtvalreirryqkatellirkLpfqrlvreiaqdfktdlrfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kesysiyvykvlkqvhpdtgisskamgImnsfvndiferiaseasrlahynkrstitsrevqTavrlllpgelakhavsegtkavtkytss >5xn0_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE Q151M:DNA BINARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(E1):DC(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 87) GLU89 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) GLN91 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ILE94 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 (113) TYR115 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) PRO157 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) GLN161 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TYR183 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) MET184 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB prot.sequence spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkqkksvtvldvgdaYfsvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanretklgkagyvtdrgrqkvvpltdttnqktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiPhpaglkqkksvtvldvgdayFsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspAifqssmtkilepfrkqnpdiviyqyMDdlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlsklLrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >5xn0_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE Q151M:DNA BINARY COMPLEX organism=? DNA sequence DG(F1):DC(F33) OMC(F2):DG(F32) DC(F3):DG(F31) OMC(F4):DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) chainC ( 87) GLU89 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) GLN91 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ILE94 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 (113) TYR115 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) PRO157 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) GLN161 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TYR183 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) MET184 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (473) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkqkksvtvldvgdaYfsvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanretklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs >5xn0_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE Q151M:DNA BINARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(F1):DC(F33) OMC(F2):DG(F32) DC(F3):DG(F31) OMC(F4):DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) chainC ( 87) GLU89 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) GLN91 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ILE94 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 (113) TYR115 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) PRO157 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) GLN161 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TYR183 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) MET184 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (473) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainD prot.sequence spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkqkksvtvldvgdaYfsvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanretklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiPhpaglkqkksvtvldvgdayFsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspAifqssmtkilepfrkqnpdiviyqyMDdlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlsklLrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >5xn1_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE Q151M:DNA:ENTECAVIR-TRIPHOSPHATE TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(E-1) DC(E0) DG(E1):DC(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainA ( 22) TRP24 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) PRO25 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) PHE61 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ILE63 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU74 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP76 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG78 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ILE94 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) TYR115 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TYR183 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) MET184 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 chainB (246) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (249) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 prot.sequence spietvpvklkpgmdgpkvkqWPlteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdaYfsvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgspaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnqktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnWasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >5xn1_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE Q151M:DNA:ENTECAVIR-TRIPHOSPHATE TERNARY COMPLEX organism=? DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DC(F0) DG(F1):DC(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 22) TRP24 0 0 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) PHE61 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ILE63 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU74 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP76 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG78 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ILE94 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) TYR115 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TYR183 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) MET184 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (473) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (499) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 prot.sequence spietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdaYfsvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgspaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs >5xn1_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE Q151M:DNA:ENTECAVIR-TRIPHOSPHATE TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DC(F0) DG(F1):DC(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 22) TRP24 0 0 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) PHE61 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ILE63 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU74 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP76 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG78 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ILE94 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) TYR115 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TYR183 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) MET184 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (473) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (499) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 chainD prot.sequence spietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdaYfsvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgspaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwPlteekikalveictemekegkiskigpenpyntpvfAiKkkdstkwrklVdFrElnkrtqdfwevqlgiPhpaglkqkksvtvldvgdayFsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqyMDdlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlsklLrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >5xn2_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE Q151M:DNA:DGTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(E-1) DC(E0) DG(E1):DC(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainA ( 22) TRP24 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) PRO25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) PHE61 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ILE63 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU74 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG78 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ILE94 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) TYR115 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TYR183 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) MET184 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 chainB (246) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (249) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 prot.sequence spietvpvklkpgmdgpkvkqWPlteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvdfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdaYfsvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgspaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnqktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnWasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >5xn2_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE Q151M:DNA:DGTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DC(F0) DG(F1):DC(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 22) TRP24 0 0 0 52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) PHE61 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ILE63 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU74 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP76 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG78 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ILE94 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) TYR115 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) PRO157 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TYR183 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) MET184 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (473) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (499) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 prot.sequence spietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdaYfsvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs >5xn2_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE Q151M:DNA:DGTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DC(F0) DG(F1):DC(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 22) TRP24 0 0 0 52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) PHE61 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ILE63 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU74 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP76 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG78 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ILE94 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) TYR115 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) PRO157 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TYR183 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) MET184 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (473) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (499) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 chainD prot.sequence spietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdaYfsvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwPlteekikalveictemekegkiskigpenpyntpvfAiKkkdstkwrklVdFrElnkrtqdfwevqlgiPhpaglkqkksvtvldvgdayFsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspAifqssmtkilepfrkqnpdiviyqyMDdlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >5xog_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH SPT5 KOW5 AND ELF1 organism=? DNA sequence DC(T-21):DG(N22) DA(T-20):DT(N21) DC(T-19):DG(N20) DT(T-18):DA(N19) DC(T-17):DG(N18) DT(T-16):DA(N17) DA(T-15):DT(N16) DC(T-14):DG(N15) DC(T-13):DG(N14) DG(T-12):DC(N13) DA(T-11):DT(N12) DT(T-10):DA(N11) DA(T-9):DT(N10) DA(T-8):DT(N9) DG(T-7):DC(N8) DC(T-6):DG(N7) DA(T-5):DT(N6) DG(T-4):DC(N5) DA(T-3):DT(N4) DG(T-2):DC(N3) DC(T-1):DG(N2) chainA (1340) ARG1389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence sqfpyssaplrsvkevqfgllspeeiraisvvkieypeimdesrqrpregglndpklgsidrnfkcqtcgegmaecpghfghmelakpvfhigfipkikkvcecicmncgkllldetnptmaqairirdpkkrfnavwqlcktkmvceadapkvvsrggcgntqpvvrkdgmklwgtwkksrdaqperklltpgeilnvfkhispedcfrlgfnedyarpewmiitvlpvpppqvrpsiamdettqgqddlthklsdilkaninvqklemdgspqhiineveqllqfhvatymdndiagqpqalqksgrpvkairarlkgkegrlrgnlmgkrvdfsartvisgdpnleldqvgvpisiaktlsypetvtqynihrlteyvrngpnehpgakyvirdngdridlryhkragdivlqygwkverhlmdddpvlfnrqpslhkmsmmahrvkvmpystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpvmgivqdtlcgvrkmtlrdtfieyeqvmnmlfwvpswdgvvpqpailkpkplwtgkqllsiaipsgihlqrtdggnsllspkdngmlivdgkvmfgvvdkktvgsgggglihtvmrekgpkicaelfgniqkvvnywllhngfsigigdaiadastmkeithaissakeqvqeiiykaqhnelelkpgmtlresfegevsrtlndardsagrsaemnlkdlnnvkqmvsagskgsfiniaqmsacvgqqmvegkriafgfadrslphftkddfspeskgfvensylrgltpqefffhamagreglidtavktaetgyiqrrlvkaledimvhydgttrnslgdiiqflygedgldgtqverqtidtipgsdkafhkryyvdlmdeknsikpdvieyaadilgdvelqkelnseyeqlvsdrkflreivfvngdhnwplpvnlrriiqnaqqifhldrakasdltipeiihgvrdlckklfvlrgenelikeaqqnatslfqclvrarlatrrileefrlnrdafewvlgtieaqfqrslvhpgemvgviaaqsigepatqmnvtlgvprlkeilnvakniktpaltvyldreialdiekakviqssieyttlknvtsateiyydpdptstvieedfdtveayfsqspwllrleldrarmldkqltmnqvadkisevfsddlfvmwsednadkliircrvieedqmlkrieahmldlialrgipgiskvymvkhkvsvpdesgeykneelwaletdginlaevmavpgvdssrtysnsfveilsvlgieatrsslykeilnviafdgsyvnyrhmallvdvmtsrgylmaitRhginradtgalmrcsfeetveilfeagaaaelddcrgvsenvmlgqlapmgtgafdvmideklltslpadyapt >5xog_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH SPT5 KOW5 AND ELF1 organism=? DNA sequence DC(T-21):DG(N22) DA(T-20):DT(N21) DC(T-19):DG(N20) DT(T-18):DA(N19) DC(T-17):DG(N18) DT(T-16):DA(N17) DA(T-15):DT(N16) DC(T-14):DG(N15) DC(T-13):DG(N14) DG(T-12):DC(N13) DA(T-11):DT(N12) DT(T-10):DA(N11) DA(T-9):DT(N10) DA(T-8):DT(N9) DG(T-7):DC(N8) DC(T-6):DG(N7) DA(T-5):DT(N6) DG(T-4):DC(N5) DA(T-3):DT(N4) DG(T-2):DC(N3) DC(T-1):DG(N2) chainA (1340) ARG1389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 chainB (466) ASP498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 chainE prot.sequence sqfpyssaplrsvkevqfgllspeeiraisvvkieypeimdesrqrpregglndpklgsidrnfkcqtcgegmaecpghfghmelakpvfhigfipkikkvcecicmncgkllldetnptmaqairirdpkkrfnavwqlcktkmvceadapkvvsrggcgntqpvvrkdgmklwgtwkksrdaqperklltpgeilnvfkhispedcfrlgfnedyarpewmiitvlpvpppqvrpsiamdettqgqddlthklsdilkaninvqklemdgspqhiineveqllqfhvatymdndiagqpqalqksgrpvkairarlkgkegrlrgnlmgkrvdfsartvisgdpnleldqvgvpisiaktlsypetvtqynihrlteyvrngpnehpgakyvirdngdridlryhkragdivlqygwkverhlmdddpvlfnrqpslhkmsmmahrvkvmpystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpvmgivqdtlcgvrkmtlrdtfieyeqvmnmlfwvpswdgvvpqpailkpkplwtgkqllsiaipsgihlqrtdggnsllspkdngmlivdgkvmfgvvdkktvgsgggglihtvmrekgpkicaelfgniqkvvnywllhngfsigigdaiadastmkeithaissakeqvqeiiykaqhnelelkpgmtlresfegevsrtlndardsagrsaemnlkdlnnvkqmvsagskgsfiniaqmsacvgqqmvegkriafgfadrslphftkddfspeskgfvensylrgltpqefffhamagreglidtavktaetgyiqrrlvkaledimvhydgttrnslgdiiqflygedgldgtqverqtidtipgsdkafhkryyvdlmdeknsikpdvieyaadilgdvelqkelnseyeqlvsdrkflreivfvngdhnwplpvnlrriiqnaqqifhldrakasdltipeiihgvrdlckklfvlrgenelikeaqqnatslfqclvrarlatrrileefrlnrdafewvlgtieaqfqrslvhpgemvgviaaqsigepatqmnvtlgvprlkeilnvakniktpaltvyldreialdiekakviqssieyttlknvtsateiyydpdptstvieedfdtveayfsqspwllrleldrarmldkqltmnqvadkisevfsddlfvmwsednadkliircrvieedqmlkrieahmldlialrgipgiskvymvkhkvsvpdesgeykneelwaletdginlaevmavpgvdssrtysnsfveilsvlgieatrsslykeilnviafdgsyvnyrhmallvdvmtsrgylmaitRhginradtgalmrcsfeetveilfeagaaaelddcrgvsenvmlgqlapmgtgafdvmideklltslpadyapt/ddtittedcwtvisaffeekglvsqqldsfdefmetsiqdlvweeprlildqpaqhtnekdninkryeirfgkiylsrptmteadgtthamfpqearlrnltysspvyldmeksmftsidgnkvhigkvpimlrskfcslrtldevdlykmkecpydmggyfvingsekvliaqersaanivqvfkkaapspishvaeirsalekgsrlistmqiklygredkgtgrtikatlpyvkqdipivivfralgvvpdgeilqhicydendwqmlemlkpcieegfviqdkevaldfigrrgsaalgirrekriqyakdilqkellphitqeegfetrktfflgymvnrlllcalerkdqddrdhfgkkrldlagpllanlfrilfrkltreiyrymqrcietdrdfnlnlavksttitsglkyslatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrDgklakprqlhnthwglvcpaetpegqacglvknlsllsgisigspsepiinfleewgmepledydpaqhtkstrifvngvwtgihrdpsmlvstmrdlrrsgaispevsiirdirerefkiftdvgrvyrplfiveddeskdnkgelritkehirkiqqgydddvygwsslvtsgvieyvdgeeeetimiamtpedlqtrslndtakrikpemstsshhtfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplaktqameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekrfgisiveefekptrattlrlkhgtyekldedgliapgvrvsgddiiigkttpippyhtkrdastplrstengivdqvllttnqeglkfvkvrmrttkvpqigdkfasrhgqkgtigvtyrhedmpfsaegivpdliinphaipsrmtvahliecllskvgsirgyegdatpftdltvdavsnllrdngyqsrgfevmynghtgkklmaqvffgptyyqrlrhmvddkiharargpvqvltrqpvegrsrdgglrfgemerdcmiahgaagflkerlmeasdafrvhvcgicglmsvianlkknqfecrscknktniyqlhipyaakllfqelmamniaprlytersg/ednnriisrlwrsfrtvkemaadrgyfisqeemdqsleefrskicdsmgnpqrklmsflanptpealekysdlgtlwvefcdepsvgiktmrnfclriqeknfstgifiyqnnitpsankmiptvspaiietfqesdlvvnithhelvpkhirlsdgeksqllqryklkesqlpriqredpvarylglkrgqvvkiirrsetsgryasyricl >5xon_ABEW:Elongation_factor_TFIIS_domain_2;Zinc_beta-ribbon;Translation_proteins_SH3-like_domain; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH SPT4/5 AND TFIIS organism=? DNA sequence DC(N-25):DG(T26) DC(N-24):DG(T25) DG(N-23):DC(T24) DT(N-22):DA(T23) DG(N-21):DC(T22) DT(N-20):DA(T21) DC(N-19):DG(T20) DT(N-18):DA(T19) DA(N-17):DT(T18) DG(N-16):DC(T17) DC(N-15):DG(T16) DA(N-14):DT(T15) DC(N-13):DG(T14) DA(N-12):DT(T13) DG(N-11):DC(T12) DG(N-10):DC(T11) DG(N-9):DC(T10) DA(N-8):DT(T4) DA(N-7):DC(T3) DA(N-6):DC(T2) DT(N-5):DA(T1) DG(N-4):DT(T0) DT(N2):DG(T-1) DG(N3):DC(T-2) DT(N4):DA(T-3) DC(N5):DG(T-4) DT(N6):DA(T-5) DG(N7):DC(T-6) DC(N8):DG(T-7) DT(N9):DA(T-8) DT(N10):DA(T-9) DA(N11):DT(T-10) DT(N12):DA(T-11) DC(N13):DG(T-12) DG(N14):DC(T-13) DG(N15):DC(T-14) DT(N16):DA(T-15) DA(N17):DT(T-16) DG(N18):DC(T-17) DA(N19):DT(T-18) DG(N20):DC(T-19) DT(N21):DA(T-20) DG(N22):DC(T-21) chainA (304) LEU316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) LYS318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) ARG351 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) PRO449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) THR832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (821) ALA833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (432) LYS464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (466) ASP498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) GLN524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainW prot.sequence sqfpyssaplrsvkevqfgllspeeiraisvvkieypeimdesrqrpregglndpklgsidrnfkcqtcgegmaecpghfghmelakpvfhigfipkikkvcecicmncgkllldetnptmaqairirdpkkrfnavwqlcktkmvceadapkvvsrggcgntqpvvrkdgmklwgtwkksrdaqperklltpgeilnvfkhispedcfrlgfnedyarpewmiitvlpvpppqvrpsiamdettqgqddlthklsdilkaninvqklemdgspqhiineveqllqfhvatymdndiagqpqaLqKsgrpvkairarlkgkegrlrgnlmgkrvdfsaRtvisgdpnleldqvgvpisiaktlsypetvtqynihrlteyvrngpnehpgakyvirdngdridlryhkragdivlqygwkverhlmdddpvlfnrqPslhkmsmmahrvkvmpystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpvmgivqdtlcgvrkmtlrdtfieyeqvmnmlfwvpswdgvvpqpailkpkplwtgkqllsiaipsgihlqrtdggnsllspkdngmlivdgkvmfgvvdkktvgsgggglihtvmrekgpkicaelfgniqkvvnywllhngfsigigdaiadastmkeithaissakeqvqeiiykaqhnelelkpgmtlresfegevsrtlndardsagrsaemnlkdlnnvkqmvsagskgsfiniaqmsacvgqqmvegkriafgfadrslphftkddfspeskgfvensylrgltpqefffhamagreglidtavkTAetgyiqrrlvkaledimvhydgttrnslgdiiqflygedgldgtqverqtidtipgsdkafhkryyvdlmdeknsikpdvieyaadilgdvelqkelnseyeqlvsdrkflreivfvngdhnwplpvnlrriiqnaqqifhldrakasdltipeiihgvrdlckklfvlrgenelikeaqqnatslfqclvrarlatrrileefrlnrdafewvlgtieaqfqrslvhpgemvgviaaqsigepatqmtlntfhyagvssknvtlgvprlkeilnvakniktpaltvyldreialdiekakviqssieyttlknvtsateiyydpdptstvieedfdtveayfsqspwllrleldrarmldkqltmnqvadkisevfsddlfvmwsednadkliircrvieedqmlkrieahmldlialrgipgiskvymvkhkvsvpdesgeykneelwaletdginlaevmavpgvdssrtysnsfveilsvlgieatrsslykeilnviafdgsyvnyrhmallvdvmtsrgylmaitrhginradtgalmrcsfeetveilfeagaaaelddcrgvsenvmlgqlapmgtgafdvmideklltslpadyapt/ddtittedcwtvisaffeekglvsqqldsfdefmetsiqdlvweeprlildqpaqhtnekdninkryeirfgkiylsrptmteadgtthamfpqearlrnltysspvyldmeksmftsidgnkvhigkvpimlrskfcslrtldevdlykmkecpydmggyfvingsekvliaqersaanivqvfkkaapspishvaeirsalekgsrlistmqiklygredkgtgrtikatlpyvkqdipivivfralgvvpdgeilqhicydendwqmlemlkpcieegfviqdkevaldfigrrgsaalgirrekriqyakdilqkellphitqeegfetrktfflgymvnrlllcalerkdqddrdhfgkkrldlagpllanlfrilfrkltreiyrymqrcietdrdfnlnlavksttitsglkyslatgnwgeqkKamssragvsqvlnrytysstlshlrrtntpigrDgklakprqlhnthwglvcpaetpegQacglvknlsllsgisigspsepiinfleewgmepledydpaqhtkstrifvngvwtgihrdpsmlvstmrdlrrsgaispevsiirdirerefkiftdvgrvyrplfiveddeskdnkgelritkehirkiqqgydddvygwsslvtsgvieyvdgeeeetimiamtpedlqtrslndtakrikpemstsshhtfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplaktqameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekrfgisiveefekptrattlrlkhgtyekldedgliapgvrvsgddiiigkttpippyhtkrdastplrstengivdqvllttnqeglkfvkvrmrttkvpqigdkfasrhgqkgtigvtyrhedmpfsaegivpdliinphaipsrmtvahliecllskvgsirgyegdatpftdltvdavsnllrdngyqsrgfevmynghtgkklmaqvffgptyyqrlrhmvddkiharargpvqvltrqpvegrsrdgglrfgemerdcmiahgaagflkerlmeasdafrvhvcgicglmsvianlkknqfecrscknktniyqlhipyaakllfqelmamniaprlytersg/ednnriisrlwrsfrtvkemaadrgyfisqeemdqsleefrskicdsmgnpqrklmsflanptpealekysdlgtlwvefcdepsvgiktmrnfclriqeknfstgifiyqnnitpsankmiptvspaiietfqesdlvvnithhelvpkhirlsdgeksqllqryklkesqlpriqredpvarylglkrgqvvkiirrsetsgryasyricl/pqrlliptvddpgiwgvkvrlgkekdvvrqilkkklaregtknpleiysafqrdsfkghvyiearkaeaindalkgnvnvfsnnskflvgiveykdllrpvsdvkltrgsyvrvkngkfkgdlaqvdevlenglearlklvprldygkdlsytskfrpaqrlfseaearvheirrdrdgfvtyggeeyyegflyktfrlqnlivnsinptlnelslfevkvgdtvreftgerrqgtilhvyrnflflrsreivenqgvfvtssnrvgrdptlnktvkirqggykgkigivkeangdrfrvelhnpnktipipcsflliesthgwvpyed >5xou_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE PROTEIN COMPLEXED WITH A BULGE 7T8 ON THE GUIDE STRAND organism=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) DNA sequence DA(D4):DT(C17) DC(D5):DG(C16) DA(D6):DT(C15) DA(D7):DT(C14) DC(D8):DG(C13) DC(D9):DG(C12) DT(D10):DT(C8) DA(D11):DA(C7) DC(D12):DT(C6) DT(D13):DG(C5) DA(D14):DG(C4) DC(D15):DA(C3) DC(D16):DG(C2) DT(D17):DT(C1) chainA ( 40) TYR43 15 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PRO44 17 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA47 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG59 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) MET413 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (294) TRP415 0 0 0 0 0 0 0 0 0 0 0 0 0 14 (297) ARG418 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (313) ILE434 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (315) ASN436 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (324) HIS445 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (325) ARG446 0 0 0 0 0 0 0 0 0 0 0 0 14 0 (328) ASN449 0 0 0 0 0 0 0 0 0 0 0 1 11 0 (427) ARG548 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (489) PHE610 0 0 0 0 0 0 0 0 0 0 1 0 2 1 (526) PHE647 0 0 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence lgktevflnrfalrplnpeelrpwrlevvldpppgreevYPllAqvarraggvtvRmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrevlggavldlwvsdsgafllevdpalpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppMaWedRnrlkalllreglpsqIlNvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavggdgghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrngRvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrdFrgtprplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >5xow_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE PROTEIN COMPLEXED WITH A BULGE 6'A7' ON THE TARGET STRAND organism=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) DNA sequence DT(C1) DG(C2) DA(C3) DG(C4) DG(C5) DT(C6) DA(C7) DG(C8) DT(C9) DA(C10) DG(C11) DG(C12) DT(C13) DT(C14) DG(C15) DT(C16) DA(C17) DT(C18) DA(C19) DG(C20) DT(C21) chainA ( 38) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 30 0 0 ( 39) GLU40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 41) VAL42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 42) TYR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 10 0 0 0 ( 43) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (191) ARG192 0 0 0 0 0 0 0 1 6 4 0 0 0 0 0 0 0 0 0 0 0 (265) THR266 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) SER280 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) MET413 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) TRP415 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (417) ARG418 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (433) ILE434 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (435) ASN436 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) HIS445 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ARG446 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ASN449 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (485) ARG486 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (607) ARG608 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (608) ASP609 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (646) PHE647 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nhlgktevflnrfalrplnpeelrpwrlevvldpppgREeVYPllaqvarraggvtvrmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkRvrnaydrrtwellrlgeedpkelplpgglslldyhaskgrlqgreggrvawvadpkdprkpiphltgllvpvlTledlheeegslalSlpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppMaWedRnrlkalllreglpsqIlNvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfRfggaacavggdgghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrngrvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhRDfrgtprplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >5xp8_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE PROTEIN COMPLEXED WITH A BULGE 4A5 ON THE GUIDE STRAND organism=? DNA sequence DG(E2):DC(F17) DA(E3):DT(F16) DG(E4):DC(F15) DG(E6):DC(F14) DT(E7):DA(F13) DA(E8):DT(F12) DG(E9):DC(F11) DT(E10):DA(F10) DA(E11):DT(F9) DG(E12):DC(F8) DG(E13):DC(F7) DT(E14):DA(F6) DT(E15):DA(F5) DG(E16):DC(F4) chainA ( 43) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 46) ALA47 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (266) LEU267 0 0 0 0 6 10 0 0 0 0 0 0 0 0 (438) HIS445 44 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) ARG446 14 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) ASN449 7 2 0 0 0 0 0 0 0 0 0 0 0 0 (479) ARG486 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (603) PHE610 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (608) ARG615 0 0 0 3 1 0 0 0 0 0 0 0 0 0 (640) PHE647 8 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nhlgktevflnrfalrplnpeelrpwrlevvldpppgreevyPllAqvarraggvtvrmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpkelplpgglslldyhaskgrlqgreggrvawvadpkdprkpiphltgllvpvltLedlhalslpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppmawedrnrlkalllreglpsqilnvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfRfggaacavggdgghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrdgrvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrdFrgtpRplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >5xpa_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE PROTEIN COMPLEXED WITH A BULGE 9'U10' ON THE TARGET STRAND organism=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) DNA sequence DT(C1) DG(C2) DA(C3) DG(C4) DG(C5) DT(C6) DA(C7) DG(C8) DT(C9) DA(C10) DG(C11) DG(C12) DT(C13) DT(C14) DG(C15) DT(C16) DA(C17) DT(C18) DA(C19) DG(C20) DT(C21) chainA (265) LEU267 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) SER280 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (408) MET413 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (410) TRP415 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) ARG418 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) ILE434 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (431) ASN436 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) HIS445 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) ARG446 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ASN449 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (604) PHE610 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (641) PHE647 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hlgktevflnrfalrplnpeelrpwrlevvldpppgreevypllaqvarraggvtvrmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpkelplpgglslldyhaskgrlqgreggrvawvadpkdprkpiphltgllvpvltLedlheelalSlpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppMaWedRnrlkalllreglpsqIlNvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfrfggaacavgdgghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrngrvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrdFrgtprplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >5xpg_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE PROTEIN COMPLEXED WITH A BULGE 6'U7' ON THE TARGET STRAND organism=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) DNA sequence DT(C1) DG(C2) DA(C3) DG(C4) DG(C5) DT(C6) DA(C7) DG(C8) DT(C9) DA(C10) DG(C11) DG(C12) DT(C13) DT(C14) DG(C15) DT(C16) DA(C17) DT(C18) DA(C19) DG(C20) DT(C21) chainA ( 38) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 39 0 0 ( 41) VAL42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 42) TYR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 7 0 0 0 ( 43) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (191) ARG192 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 (412) MET413 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) TRP415 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (417) ARG418 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (433) ILE434 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (435) ASN436 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) HIS445 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ARG446 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ASN449 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (485) ARG486 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (608) ASP609 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (646) PHE647 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nhlgktevflnrfalrplnpeelrpwrlevvldpppgReeVYPllaqvarraggvtvrmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkRvrnaydrrtwellrlgeedpkelplpgglslldyhaskgrlqgreggrvawvadpkdprkpiphltgllvpvltledlheeegslalslpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgrravskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppMaWedRnrlkalllreglpsqIlNvplreeerHRweNallgllakaglqvvalsgaypaelavgfdaggresfRfggaacavggdgghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrngrvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrDfrgtprplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >5xq2_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE PROTEIN COMPLEXED WITH A BULGE 5A6 ON THE GUIDE STRAND organism=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) / Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) DNA sequence DG(X2):DC(Y18) DA(X3):DT(Y17) DG(X5):DC(Y15) DT(X7):DA(Y14) DA(X8):DT(Y13) DG(X9):DC(Y12) DT(X10):DA(Y11) DA(X11):DT(Y10) DG(X12):DC(Y9) DG(X13):DC(Y8) DT(X14):DA(Y7) DT(X15):DA(Y6) DG(X16):DC(Y5) DT(X17):DA(Y4) chainA ( 40) TYR43 0 0 0 0 0 0 0 0 0 0 0 0 0 18 ( 41) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 56) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (264) LEU267 0 0 0 2 1 0 0 0 0 0 0 0 0 0 (437) GLU443 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) HIS445 32 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) ARG446 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ASN449 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLU483 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (480) ARG486 0 0 0 0 0 0 0 0 5 3 0 0 0 0 (542) ARG548 0 0 0 0 0 0 0 0 0 0 8 0 0 0 (605) ARG611 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (609) ARG615 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (641) PHE647 6 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lgktevflnrfalrplnpeelrpwrlevvldpppgreevYPllaqvarraggvtvRmgdglaswsppevlvlegtlarmgqtyayrlypkgrrpldpkdpgersvlsalarrllqerlrrlegvwveglavyrrehargpgwrvlggavldlwvsdsgafllevdpayrilcemsleawlaqghplpkrvrnaydrrtwellrlgeedpkelplpgglslldyhaskgrlqgreggrvawvadpkdprkpiphltgllvpvltLedlheeegslalslpweerrrrtreiaswigrrlglgtpeavraqayrlsipklmgvskpadalrvgfyraqetalallrldgaqgwpeflrrallrafgasgaslrlhtlhahpsqglafrealrkakeegvqavlvltppmawedrnrlkalllreglpsqilnvplreeErHRweNallgllakaglqvvalsgaypaelavgfdaggrEsfRfggaacavggdgghllwtlpeaqageripqevvwdlleetlwafrrkagrlpsrvlllrngRvpqdefalalealaregiaydlvsvrksgggrvypvqgrladglyvpledktfllltvhrdfRgtpRplklvheagdtplealahqifhltrlypasgFafprlpaplhladrlvkevgrlgirhlkevdreklffv >5xrz_I:dsRNA-binding_domain-like; title=STRUCTURE OF A SSDNA BOUND TO THE INNER DNA BINDING SITE OF RAD52 organism=Homo sapiens DNA sequence DT(L1) DT(L2) DT(L3) DT(L4) DT(L5) DT(L6) DT(L7) DT(L8) DT(L9) DT(L10) DT(L11) DT(L12) DT(L13) DT(L14) DT(L15) DT(L16) DT(L17) DT(L18) DC(L19) DC(L20) DC(L21) DT(L22) DT(L23) DT(L24) DT(L25) DT(L26) DT(L27) DT(L28) DT(L29) DT(L30) DT(L31) DT(L32) DT(L33) DT(L34) DT(L35) DT(L36) DT(L37) DT(L38) DT(L39) DT(L40) chainI ( 31) ARG55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 ( 39) VAL63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 (117) LYS141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 (121) GLU145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 prot.sequence cfgqcqytaeeyqaiqkalrqrlgpeyissRmagggqkVcyieghrvinlanemfgyngwahsitqqnvdfvdlnngafyvgvcafvrvqlkdgsyhedvgygvseglaskalsleKarkEavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc >5xs0_FGHNOP:dsRNA-binding_domain-like; title=STRUCTURE OF A SSDNA BOUND TO THE OUTER DNA BINDING SITE OF RAD52 organism=Homo sapiens DNA sequence DC(Y1) DC(Y2) DC(Y3) DC(Y4) DC(Y5) DC(Y6) DC(Y7) DC(Y8) DC(Y9) DC(Y10) chainF (108) LEU132 0 0 3 7 0 0 0 0 0 0 (109) LYS133 0 0 0 10 4 0 0 0 0 0 (110) SER134 0 0 0 2 0 0 0 0 0 0 chainG ( 78) LYS102 0 0 0 0 0 0 0 1 2 0 (108) LEU132 0 0 0 0 0 0 0 0 5 9 (109) LYS133 0 0 0 0 0 0 0 0 0 12 (110) SER134 0 0 0 0 0 0 0 0 0 2 chainH chainN (108) LEU132 5 0 0 0 0 0 0 0 0 0 (109) LYS133 9 6 0 0 0 0 0 0 0 0 (110) SER134 1 0 0 0 0 0 0 0 0 0 (113) LEU137 1 0 0 0 0 0 0 0 0 0 chainO ( 78) LYS102 0 0 0 0 1 0 2 0 0 0 (108) LEU132 0 0 0 0 0 5 10 0 0 0 (109) LYS133 0 0 0 0 0 0 12 9 0 0 (110) SER134 0 0 0 0 0 0 1 0 0 0 chainP prot.sequence cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvsegLKSkalslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc/cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngKfyvgvcafvrvqlkdgsyhedvgygvsegLKSkalslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc/cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngKfyvgvcafvrvqlkdgsyhedvgygvsegLKSkalslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc/cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvsegLKSkaLslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc/cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngKfyvgvcafvrvqlkdgsyhedvgygvsegLKSkalslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc/cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngKfyvgvcafvrvqlkdgsyhedvgygvsegLKSkalslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc >5xs0_I:dsRNA-binding_domain-like; title=STRUCTURE OF A SSDNA BOUND TO THE OUTER DNA BINDING SITE OF RAD52 organism=Homo sapiens DNA sequence DC(Z1) DC(Z2) DC(Z3) DC(Z4) DC(Z5) DC(Z6) DC(Z7) DC(Z8) DC(Z9) chainI ( 78) LYS102 0 0 0 1 0 0 0 0 0 (108) LEU132 0 0 0 6 12 0 0 0 0 (109) LYS133 0 0 0 0 11 13 0 0 0 (110) SER134 0 0 0 0 2 0 0 0 0 prot.sequence cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngKfyvgvcafvrvqlkdgsyhedvgygvsegLKSkalslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc >5xs0_IJ:dsRNA-binding_domain-like; title=STRUCTURE OF A SSDNA BOUND TO THE OUTER DNA BINDING SITE OF RAD52 organism=Homo sapiens DNA sequence DC(Z1) DC(Z2) DC(Z3) DC(Z4) DC(Z5) DC(Z6) DC(Z7) DC(Z8) DC(Z9) chainI ( 78) LYS102 0 0 0 1 0 0 0 0 0 (108) LEU132 0 0 0 6 12 0 0 0 0 (109) LYS133 0 0 0 0 11 13 0 0 0 (110) SER134 0 0 0 0 2 0 0 0 0 chainJ prot.sequence cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngKfyvgvcafvrvqlkdgsyhedvgygvsegLKSkalslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc/cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngKfyvgvcafvrvqlkdgsyhedvgygvsegLKSkalslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc >5xs0_QR:dsRNA-binding_domain-like; title=STRUCTURE OF A SSDNA BOUND TO THE OUTER DNA BINDING SITE OF RAD52 organism=Homo sapiens DNA sequence DC(W1) DC(W2) DC(W3) DC(W4) DC(W5) DC(W6) chainQ (108) LEU132 5 7 0 0 0 0 (109) LYS133 0 10 14 0 0 0 (110) SER134 0 1 0 0 0 0 chainR ( 78) LYS102 0 0 0 0 1 0 prot.sequence cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvsegLKSkalslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc/cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngKfyvgvcafvrvqlkdgsyhedvgygvseglkskalslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc >5xs0_TUV:dsRNA-binding_domain-like; title=STRUCTURE OF A SSDNA BOUND TO THE OUTER DNA BINDING SITE OF RAD52 organism=Homo sapiens DNA sequence DC(X1) DC(X2) DC(X3) DC(X4) DC(X5) DC(X6) DC(X7) DC(X8) chainT (108) LEU132 5 8 0 0 0 0 0 0 (109) LYS133 0 11 9 0 0 0 0 0 (110) SER134 0 1 0 0 0 0 0 0 chainU (108) LEU132 0 0 0 0 0 0 7 10 (109) LYS133 0 0 0 0 0 0 0 12 (110) SER134 0 0 0 0 0 0 0 1 chainV prot.sequence cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvsegLKSkalslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc/cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvsegLKSkalslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc/cfgqcqytaeeyqaiqkalrqrlgpeyissrmagggqkvcyieghrvinlanemfgyngwahsitqqnvdfvdlnngkfyvgvcafvrvqlkdgsyhedvgygvsegLKSkalslekarkeavtdglkralrsfgnalgncildkdylrslnklprqlplevdltkakrqdlepsveearynsc >5xus_A: title=CRYSTAL STRUCTURE OF LACHNOSPIRACEAE BACTERIUM ND2006 CPF1 IN COMPLEX WITH CRRNA AND TARGET DNA (TTTA PAM) organism=LACHNOSPIRACEAE BACTERIUM ND2006 DNA sequence DC(D-9):DG(C9) DG(D-8):DC(C8) DT(D-7):DA(C7) DC(D-6):DG(C6) DC(D-5):DG(C5) DT(D-4):DA(C4) DT(D-3):DA(C3) DT(D-2):DA(C2) DA(D-1):DT(C1) chainA (150) THR149 0 0 0 0 0 4 2 0 0 (525) GLN529 0 0 0 0 1 7 1 0 0 (534) LYS538 0 0 0 0 0 1 8 4 0 (537) ASP541 0 0 0 1 2 0 0 0 0 (538) TYR542 0 0 0 0 0 0 0 2 0 (583) PRO587 0 0 0 0 0 0 0 0 1 (587) LYS591 0 0 0 0 0 0 0 0 12 (588) MET592 0 0 0 0 0 0 0 3 3 (591) LYS595 0 0 0 0 0 1 6 9 3 prot.sequence hmsklekftncyslsktlrfkaipvgktqenidnkrllvedekraedykgvkklldryylsfindvlhsiklknlnnyislfrkktrtekenkelenleinlrkeiakafkgnegykslfkkdiietilpeflddkdeialvnsfngftTaftgffdnrenmfseeakstsiafrcinenltryisnmdifekvdaifdkhevqeikekilnsdydvedffegeffnfvltqegidvynaiiggfvtesgekikglneyinlynqktkqklpkfkplykqvlsdreslsfygegytsdeevlevfrntlnknseifssikkleklfknfdeyssagifvkngpaistiskdifgewnvirdkwnaeyddihlvtekyeddrrksfkkigsfsleqlqeyadadlsvveklkeiiiqkvdeiykvygsseklfdadfvlekslkkndavvaimkdlldsvksfenyikaffgegketnrdesfygdfvlaydillkvdhiydairnyvtqkpyskdkfklyfqnpQfmggwdkdKetDYratilrygskyylaimdkkyakclqkidkddvngnyekinykllPgpnKMlpKvffskkwmayynpsediqkiykngtfkkgdmfnlndchklidffkdsisrypkwsnaydfnfsetekykdiagfyreveeqgykvsfesaskkevdklveegklymfqiynkdfsdkshgtpnlhtmyfkllfdennhgqirlsggaelfmrraslkkeelvvhpanspianknpdnpkktttlsydvykdkrfsedqyelhipiainkcpknifkintevrvllkhddnpyvigidrgernllyivvvdgkgniveqyslneiinnfngiriktdyhslldkkekerfearqnwtsienikelkagyisqvvhkicelvekydavialedlnvkvekqvyqkfekmlidklnymvdkksnpcatggalkgyqitnkfesfksmstqngfifyipawltskidpstgfvnllktkytsiadskkfissfdrimyvpeedlfefaldyknfsrtdadyikkwklysygnririfdweevcltsaykelfnkyginyqqgdirallceqsdkafyssfmalmslmlqmrnsitgrtdvdflispvknsdgifydsrnyeaqenailpknadangayniarkvlwaigqfkkaedekldkvkiaisnkewleyaqtsv >5xut_A: title=CRYSTAL STRUCTURE OF LACHNOSPIRACEAE BACTERIUM ND2006 CPF1 IN COMPLEX WITH CRRNA AND TARGET DNA (TCTA PAM) organism=LACHNOSPIRACEAE BACTERIUM ND2006 DNA sequence DC(D-9):DG(C9) DG(D-8):DC(C8) DT(D-7):DA(C7) DC(D-6):DG(C6) DC(D-5):DG(C5) DT(D-4):DA(C4) DC(D-3):DG(C3) DT(D-2):DA(C2) DA(D-1):DT(C1) chainA (149) THR149 0 0 0 0 0 3 0 0 0 (524) GLN529 0 0 0 0 1 4 0 0 0 (533) LYS538 0 0 0 0 0 2 11 4 0 (536) ASP541 0 0 0 1 1 0 0 0 0 (537) TYR542 0 0 0 0 0 0 0 2 0 (582) PRO587 0 0 0 0 0 0 0 0 1 (586) LYS591 0 0 0 0 0 0 0 0 10 (587) MET592 0 0 0 0 0 0 0 1 0 (590) LYS595 0 0 0 0 0 0 7 6 0 (596) LYS601 0 0 0 0 0 1 0 0 0 prot.sequence msklekftncyslsktlrfkaipvgktqenidnkrllvedekraedykgvkklldryylsfindvlhsiklknlnnyislfrkktrtekenkelenleinlrkeiakafkgnegykslfkkdiietilpeflddkdeialvnsfngftTaftgffdnrenmfseeakstsiafrcinenltryisnmdifekvdaifdkhevqeikekilnsdydvedffegeffnfvltqegidvynaiiggfvtesgekikglneyinlynqktkqklpkfkplykqvlsdreslsfygegytsdeevlevfrntlnknseifssikkleklfknfdeyssagifvkngpaistiskdifgewnvirdkwnaeyddihlvtekyeddrrksfkkigsfsleqlqeyadadlsvveklkeiiiqkvdeiykvygsseklfdadfvlekslkkndavvaimkdlldsvksfenyikaffgegketnrdesfygdfvlaydillkvdhiydairnyvtqkpyskdkfklyfqnpQfmggwdkdKetDYratilrygskyylaimdkkyakclqkidkddvngnyekinykllPgpnKMlpKvffskKwmayynpsediqkiykngtfkkgdmfnlndchklidffkdsisrypkwsnaydfnfsetekykdiagfyreveeqgykvsfesaskkevdklveegklymfqiynkdfsdkshgtpnlhtmyfkllfdennhgqirlsggaelfmrraslkkeelvvhpanspianknpdnpkktttlsydvykdkrfsedqyelhipiainkcpknifkintevrvllkhddnpyvigidrgernllyivvvdgkgniveqyslneiinnfngiriktdyhslldkkekerfearqnwtsienikelkagyisqvvhkicelvekydavialedlnsgfknsrvkvekqvyqkfekmlidklnymvdkksnpcatggalkgyqitnkfesfksmstqngfifyipawltskidpstgfvnllktkytsiadskkfissfdrimyvpeedlfefaldyknfsrtdadyikkwklysygnririfrnnvfdweevcltsaykelfnkyginyqqgdirallceqsdkafyssfmalmslmlqmrnsitgrtdvdflispvknsdgifydsrnyeaqenailpknadangayniarkvlwaigqfkkaedekldkvkiaisnkewleyaqtsv >5xuu_A: title=CRYSTAL STRUCTURE OF LACHNOSPIRACEAE BACTERIUM ND2006 CPF1 IN COMPLEX WITH CRRNA AND TARGET DNA (TCCA PAM) organism=LACHNOSPIRACEAE BACTERIUM ND2006 DNA sequence DT(C1):DA(D-1) DG(C2):DC(D-2) DG(C3):DC(D-3) DA(C4):DT(D-4) DG(C5):DC(D-5) DG(C6):DC(D-6) DA(C7):DT(D-7) DC(C8):DG(D-8) DG(C9):DC(D-9) chainA (149) THR149 0 0 0 2 0 0 0 0 0 (524) GLN529 0 0 0 3 2 0 0 0 0 (533) LYS538 0 4 10 1 0 0 0 0 0 (536) ASP541 0 0 0 0 1 0 0 0 0 (537) TYR542 0 2 0 0 0 0 0 0 0 (586) LYS591 4 0 0 0 0 0 0 0 0 (587) MET592 0 1 0 0 0 0 0 0 0 (590) LYS595 3 6 0 0 0 0 0 0 0 prot.sequence msklekftncyslsktlrfkaipvgktqenidnkrllvedekraedykgvkklldryylsfindvlhsiklknlnnyislfrkktrtekenkelenleinlrkeiakafkgnegykslfkkdiietilpeflddkdeialvnsfngftTaftgffdnrenmfseeakstsiafrcinenltryisnmdifekvdaifdkhevqeikekilnsdydvedffegeffnfvltqegidvynaiiggfvtesgekikglneyinlynqktkqklpkfkplykqvlsdreslsfygegytsdeevlevfrntlnknseifssikkleklfknfdeyssagifvkngpaistiskdifgewnvirdkwnaeyddihlvtekyeddrrksfkkigsfsleqlqeyadadlsvveklkeiiiqkvdeiykvygsseklfdadfvlekslkkndavvaimkdlldsvksfenyikaffgegketnrdesfygdfvlaydillkvdhiydairnyvtqkpyskdkfklyfqnpQfmggwdkdKetDYratilrygskyylaimdkkyakclqkidkddvngnyekinykllpgpnKMlpKvffskkwmayynpsediqkiykngtfkkgdmfnlndchklidffkdsisrypkwsnaydfnfsetekykdiagfyreveeqgykvsfesaskkevdklveegklymfqiynkdfsdkshgtpnlhtmyfkllfdennhgqirlsggaelfmrraslkkeelvvhpanspianknpdnpkktttlsydvykdkrfsedqyelhipiainkcpknifkintevrvllkhddnpyvigidrgernllyivvvdgkgniveqyslneiinnfngiriktdyhslldkkekerfearqnwtsienikelkagyisqvvhkicelvekydavialedlnsgfknsrvkvekqvyqkfekmlidklnymvdkksnpcatggalkgyqitnkfesfksmstqngfifyipawltskidpstgfvnllktkytsiadskkfissfdrimyvpeedlfefaldyknfsrtdadyikkwklysygnririfrdweevcltsaykelfnkyginyqqgdirallceqsdkafyssfmalmslmlqmrnsitgrtdvdflispvknsdgifydsrnyeaqenailpknadangayniarkvlwaigqfkkaedekldkvkiaisnkewleyaqtsv >5xuz_A: title=CRYSTAL STRUCTURE OF LACHNOSPIRACEAE BACTERIUM ND2006 CPF1 IN COMPLEX WITH CRRNA AND TARGET DNA (CCCA PAM) organism=LACHNOSPIRACEAE BACTERIUM ND2006 DNA sequence DT(C1):DA(D-1) DG(C2):DC(D-2) DG(C3):DC(D-3) DG(C4):DC(D-4) DG(C5):DC(D-5) DG(C6):DC(D-6) DA(C7):DT(D-7) DC(C8):DG(D-8) DG(C9):DC(D-9) chainA (152) THR149 0 0 1 1 0 0 0 0 0 (529) GLN529 0 0 5 1 0 0 0 0 0 (538) LYS538 0 4 9 0 0 0 0 0 0 (541) ASP541 0 0 0 0 3 0 0 0 0 (542) TYR542 0 4 0 0 0 0 0 0 0 (591) LYS591 4 0 0 0 0 0 0 0 0 (592) MET592 0 5 0 0 0 0 0 0 0 (595) LYS595 5 8 0 0 0 0 0 0 0 prot.sequence gshmsklekftncyslsktlrfkaipvgktqenidnkrllvedekraedykgvkklldryylsfindvlhsiklknlnnyislfrkktrtekenkelenleinlrkeiakafkgnegykslfkkdiietilpeflddkdeialvnsfngftTaftgffdnrenmfseeakstsiafrcinenltryisnmdifekvdaifdkhevqeikekilnsdydvedffegeffnfvltqegidvynaiiggfvtesgekikglneyinlynqktkqklpkfkplykqvlsdreslsfygegytsdeevlevfrntlnknseifssikkleklfknfdeyssagifvkngpaistiskdifgewnvirdkwnaeyddihlkvvtekyeddrrksfkkigsfsleqlqeyadadlsvveklkeiiiqkvdeiykvygsseklfdadfvlekslkkndavvaimkdlldsvksfenyikaffgegketnrdesfygdfvlaydillkvdhiydairnyvtqkpyskdkfklyfqnpQfmggwdkdKetDYratilrygskyylaimdkkyakclqkidkddvngnyekinykllpgpnKMlpKvffskkwmayynpsediqkiykngtfkkgdmfnlndchklidffkdsisrypkwsnaydfnfsetekykdiagfyreveeqgykvsfesaskkevdklveegklymfqiynkdfsdkshgtpnlhtmyfkllfdennhgqirlsggaelfmrraslkkeelvvhpanspianknpdnpkktttlsydvykdkrfsedqyelhipiainkcpknifkintevrvllkhddnpyvigidrgernllyivvvdgkgniveqyslneiinnfngiriktdyhslldkkekerfearqnwtsienikelkagyisqvvhkicelvekydavialedlnsgfknsrvkvekqvyqkfekmlidklnymvdkksnpcatggalkgyqitnkfesfksmstqngfifyipawltskidpstgfvnllktkytsiadskkfissfdrimyvpeedlfefaldyknfsrtdadyikkwklysygnriridweevcltsaykelfnkyginyqqgdirallceqsdkafyssfmalmslmlqmrnsitgrtdvdflispvknsdgifydsrnyeaqenailpknadangayniarkvlwaigqfkkaedekldkvkiaisnkewleyaqtsv >5xvn_ABCDEF: title=E. FAR CAS1-CAS2/PRESPACER BINARY COMPLEX organism=ENTEROCOCCUS FAECALIS TX0027 DNA sequence DC(H3):DG(G24) DG(H4):DC(G23) DT(H5):DA(G22) DA(H6):DT(G21) DG(H7):DC(G20) DC(H8):DG(G19) DT(H9):DA(G18) DG(H10):DC(G17) DA(H11):DT(G16) DG(H12):DC(G15) DG(H13):DC(G14) DC(H14):DG(G13) DC(H15):DG(G12) DT(H16):DA(G11) DC(H17):DG(G10) DA(H18):DT(G9) DG(H19):DC(G8) DC(H20):DG(G7) DT(H21):DA(G6) DA(H22):DT(G5) DC(H23):DG(G4) DG(H24):DC(G3) chainA ( 11) HIS11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 46) ASP46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainB chainC ( 11) HIS11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR45 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASP46 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 52) MET52 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 12) THR16 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 ( 21) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 22) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 ( 26) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 chainF ( 16) THR16 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 ( 25) TYR25 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG26 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LYS30 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mgwrtvvvnkHsklsyknnhlvfkaidhqelihlseidvlllettDislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/mgwrtvvvnkHsklsyknnhlvfkaidhqelihlseidvlllettDislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhanqfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/mgwrtvvvnkHsklsyknnhlvfkaidhqelihlseidvllletTDislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/mgwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvlllettdislttMllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraeqendinaglnygytlllsifarelvqtgcftqlglkhanqfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/ymrlllmfdmpTdtasdrkaYRkfrKflinegfimhqfsvyskillndtankamlarlkqnnpqrglitllnvtekqfsrmiylhgeqdnrvansderivflge/msyrymrlllmfdmpTdtasdrkaYRkfrKflinegfimhqfsvyskillndtankamlarlkqnnpqrglitllnvtekqfsrmiylhgeqdnrvansderivflge >5xvn_IJKLMN: title=E. FAR CAS1-CAS2/PRESPACER BINARY COMPLEX organism=ENTEROCOCCUS FAECALIS TX0027 DNA sequence DC(O3):DG(P24) DG(O4):DC(P23) DT(O5):DA(P22) DA(O6):DT(P21) DG(O7):DC(P20) DC(O8):DG(P19) DT(O9):DA(P18) DG(O10):DC(P17) DA(O11):DT(P16) DG(O12):DC(P15) DG(O13):DC(P14) DC(O14):DG(P13) DC(O15):DG(P12) DT(O16):DA(P11) DC(O17):DG(P10) DA(O18):DT(P9) DG(O19):DC(P8) DC(O20):DG(P7) DT(O21):DA(P6) DA(O22):DT(P5) DC(O23):DG(P4) DG(O24):DC(P3) chainI ( 11) HIS11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR45 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASP46 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ chainK ( 11) HIS11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 46) ASP46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainL ( 52) MET52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainM ( 16) THR16 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 ( 25) TYR25 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG26 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LYS30 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 12) THR16 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 21) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 22) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 26) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 prot.sequence mgwrtvvvnkHsklsyknnhlvfkaidhqelihlseidvllletTDislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/mgwrtvvvnkHsklsyknnhlvfkaidhqelihlseidvllletTDislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhanqfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/mgwrtvvvnkHsklsyknnhlvfkaidhqelihlseidvlllettDislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/mgwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvlllettdislttMllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhanqfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/msyrymrlllmfdmpTdtasdrkaYRkfrKflinegfimhqfsvyskillndtankamlarlkqnnpqrglitllnvtekqfsrmiylhgeqdnrvansderivflge/ymrlllmfdmpTdtasdrkaYRkfrKflinegfimhqfsvyskillndtankamlarlkqnnpqrglitllnvtekqfsrmiylhgeqdnrvansderivflge >5xvn_L: title=E. FAR CAS1-CAS2/PRESPACER BINARY COMPLEX organism=? DNA sequence DC(P3):DG(O24) DG(P4):DC(O23) DT(P5):DA(O22) DA(P6):DT(O21) DG(P7):DC(O20) DC(P8):DG(O19) DT(P9):DA(O18) DG(P10):DC(O17) DA(P11):DT(O16) DG(P12):DC(O15) DG(P13):DC(O14) DC(P14):DG(O13) DC(P15):DG(O12) DT(P16):DA(O11) DC(P17):DG(O10) DA(P18):DT(O9) DG(P19):DC(O8) DC(P20):DG(O7) DT(P21):DA(O6) DA(P22):DT(O5) DC(P23):DG(O4) DG(P24):DC(O3) chainL ( 52) MET52 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mgwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvlllettdislttMllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhanqfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi >5xvo_ACF: title=E. FAE CAS1-CAS2/PRESPACER/TARGET TERNARY COMPLEX REVEALING DNA SAMPLING AND HALF-INTEGRATION STATES organism=ENTEROCOCCUS FAECALIS TX0027 DNA sequence DC(G3):DG(R1) DG(G4):DC(R0) DT(G5):DA(R-1) DA(G6):DT(R-2) DG(G7):DC(R-3) DC(G8):DG(R-4) DT(G9):DA(R-5) DG(G10):DC(R-6) DA(G11):DT(R-7) DG(G12):DC(R-8) DG(G13):DC(R-9) DC(G14):DG(R-10) DC(G15):DG(R-11) DT(G16):DA(R-12) DC(G17):DG(R-13) DA(G18):DT(R-14) DG(G19):DC(R-15) DC(G20):DG(R-16) DT(G21):DA(R-17) DA(G22):DT(R-18) DC(G23):DG(R-19) DG(G24):DC(R-20) chainA chainC ( 45) THR45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 46) ASP46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 chainF ( 13) THR16 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 22) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 23) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 ( 27) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mgwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvlllettdislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhanqfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/mgwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvllletTDislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhqfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/rymrlllmfdmpTdtasdrkaYRkfrKflinegfimhqfsvyskillndtankamlarlkqnnpqrglitllnvtekqfsrmiylhgeqdnrvansderivflge >5xvo_BDE: title=E. FAE CAS1-CAS2/PRESPACER/TARGET TERNARY COMPLEX REVEALING DNA SAMPLING AND HALF-INTEGRATION STATES organism=ENTEROCOCCUS FAECALIS TX0027 DNA sequence DC(H1):DG(Q46) DC(H2):DG(Q45) DG(H3):DC(Q44) DA(H4):DT(Q43) DG(H5):DC(Q42) DG(R6):DC(Q41) DT(R7):DA(Q40) DT(R8):DA(Q39) DT(R9):DA(Q38) DT(R10):DA(Q37) DA(R11):DT(Q36) DG(R12):DC(Q35) DA(R13):DT(Q34) DG(R14):DC(Q33) DT(R15):DA(Q32) DC(R16):DG(Q31) DA(R17):DT(Q30) DT(R18):DA(Q29) DG(R19):DC(Q28) DT(R20):DA(Q27) DT(R21):DA(Q26) DG(R22):DC(Q25) DT(R23):DA(Q24) DT(R24):DA(Q23) DT(R25):DA(Q22) DA(R26):DT(Q21) DG(R27):DC(Q20) DA(R28):DT(Q19) DA(R29):DT(Q18) DT(R30):DA(Q17) DG(R31):DC(Q16) DG(R32):DC(Q15) DT(R33):DA(Q14) DA(R34):DT(Q13) DC(R35):DG(Q12) DC(R36):DG(Q11) DA(R37):DT(Q10) DA(R38):DT(Q9) DA(R39):DT(Q8) DA(R40):DT(Q7) DC(R41):DG(Q6) DC(R42):DG(Q5) DT(R43):DA(Q4) DC(R44):DG(Q3) DG(R45):DC(Q2) DG(R46):DC(Q1) chainB (146) ASN146 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) HIS150 0 7 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG153 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ASN206 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) GLN207 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) PHE208 0 0 0 0 0 0 0 2 4 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ASN51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASP52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) THR53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mgwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvlllettdislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpaNregHaaRsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhaNQFndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/gwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvlllettdislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanReghAarSyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhanQFNdfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/yRymrlllmfdmptdtasdrkayrkfrkflinegfimhqfsvyskillNDTanKamlarlkqnnpqrglitllnvtekqfsrmiylhgeqdnrvansderivflge >5xvo_IJLMN: title=E. FAE CAS1-CAS2/PRESPACER/TARGET TERNARY COMPLEX REVEALING DNA SAMPLING AND HALF-INTEGRATION STATES organism=ENTEROCOCCUS FAECALIS TX0027 DNA sequence DC(O3):DG(P24) DG(O4):DC(P23) DT(O5):DA(P22) DA(O6):DT(P21) DG(O7):DC(P20) DC(O8):DG(P19) DT(O9):DA(P18) DG(O10):DC(P17) DA(O11):DT(P16) DG(O12):DC(P15) DG(O13):DC(P14) DC(O14):DG(P13) DC(O15):DG(P12) DT(O16):DA(P11) DC(O17):DG(P10) DA(O18):DT(P9) DG(O19):DC(P8) DC(O20):DG(P7) DT(O21):DA(P6) DA(O22):DT(P5) DC(O23):DG(P4) DG(O24):DC(P3) chainI ( 11) HIS11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASP46 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ chainL chainM ( 12) THR16 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR25 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG26 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS30 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 13) THR16 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 22) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 23) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 prot.sequence mgwrtvvvnkHsklsyknnhlvfkaidhqelihlseidvlllettDislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/gwrtvvvnkhSklsyknnhlvfkaidhqelihlseidvlllettdIslttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhanqfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/mgwrtvvvnkHsklsyknnhlvfkaidhqelihlseidvlllettDislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhanqfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/ymrlllmfdmpTdtasdrkaYRkfrKflinegfimhqfsvyskillndtankamlarlkqnnpqrglitllnvtekqfsrmiylhgeqdnrvansderivflge/rymrlllmfdmpTdtasdrkaYRkfrkflinegfimhqfsvyskillndtankamlarlkqnnpqrglitllnvtekqfsrmiylhgeqdnrvansderivflge >5xvp_ACEF: title=E. FAE CAS1-CAS2/PRESPACER/TARGET TERNARY COMPLEX REVEALING THE FULLY INTEGRATED STATES organism=ENTEROCOCCUS FAECALIS TX0027 DNA sequence DC(G20):DA(H73) DT(G21):DA(H72) DA(G22):DG(H71) DC(G23):DA(H70) DG(G24):DG(H69) DT(G25):DG(H68) DT(G26):DC(H67) DC(G27):DT(H66) DC(G28):DC(H65) DG(G29):DC(H64) DT(G30):DA(H63) DT(G31):DA(H62) DT(G32):DA(H61) DT(G33):DA(H60) DG(G34):DC(H59) DG(G35):DC(H58) DT(G36):DA(H57) DA(G37):DT(H56) DC(G38):DG(H55) DC(G39):DG(H54) DA(G40):DT(H53) DT(G41):DA(H52) DT(G42):DA(H51) DC(G43):DG(H50) DT(G44):DA(H49) DA(G45):DT(H48) DA(G46):DT(H47) DA(G47):DT(H46) DC(G48):DG(H45) DA(G49):DT(H44) DA(G50):DT(H43) DC(G51):DG(H42) DA(G52):DT(H41) DT(G53):DA(H40) DG(G54):DC(H39) DA(G55):DT(H38) DC(G56):DG(H37) DT(G57):DA(H36) DC(G58):DG(H35) DT(G59):DA(H34) DA(G60):DT(H33) DA(G61):DT(H32) DA(G62):DT(H31) DA(G63):DT(H30) DC(G64):DG(H29) DC(G65):DC(H28) DT(G66):DC(H27) DC(G67):DT(H26) DG(G68):DT(H25) DG(G69):DG(H24) DA(G70):DC(H23) DG(G71):DA(H22) DA(G72):DT(H21) chainA ( 84) HIS84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 84) HIS84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) ARG4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ASN51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ASP52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) THR53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 48) ASN51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ASP52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) THR53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mgwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvlllettdislttmllkrlidekilvlfcddkrlpigkilpfygrHdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhanqfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpef/mgwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvlllettdislttmllkrlidekilvlfcddkrlpigkilpfygrHdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhanqfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/RymrlllmfdmptdtasdrkayrkfrkflinegfimhqfsvyskillNDTankamlarlkqnnpqrglitllnvtekqfsrmiylhgeqdnrvansderivflg/rymrlllmfdmptdtasdrkayrkfrkflinegfimhqfsvyskillNDTankamlarlkqnnpqrglitllnvtekqfsrmiylhgeqdnrvansderivf >5xvp_B: title=E. FAE CAS1-CAS2/PRESPACER/TARGET TERNARY COMPLEX REVEALING THE FULLY INTEGRATED STATES organism=ENTEROCOCCUS FAECALIS TX0027 DNA sequence DG(h10):DG(g80) DG(h11):DA(g79) DC(h12):DG(g78) DC(h13):DC(g77) DT(h14):DC(g76) DC(h15):DT(g75) DA(h16):DC(g74) DG(h17):DT(g73) DC(h18):DT(g72) DT(h19):DA(g71) DA(h20):DG(g70) DC(h21):DA(g69) DG(h22):DG(g68) DT(h23):DG(g67) DT(h24):DC(g66) DC(h25):DT(g65) DC(h26):DC(g64) DG(h27):DC(g63) DT(h28):DA(g62) DT(h29):DA(g61) DT(h30):DA(g60) DT(h31):DA(g59) DA(h32):DT(g58) DG(h33):DC(g57) DA(h34):DT(g56) DG(h35):DC(g55) DT(h36):DA(g54) DC(h37):DG(g53) DA(h38):DT(g52) DT(h39):DA(g51) DG(h40):DC(g50) DT(h41):DA(g49) DT(h42):DA(g48) DG(h43):DC(g47) DT(h44):DA(g46) DT(h45):DA(g45) DT(h46):DA(g44) DA(h47):DT(g43) DG(h48):DC(g42) DA(h49):DT(g41) DA(h50):DT(g40) DT(h51):DA(g39) DG(h52):DC(g38) DG(h53):DC(g37) DT(h54):DA(g36) DA(h55):DT(g35) DC(h56):DG(g34) DC(h57):DG(g33) DA(h58):DT(g32) DA(h59):DT(g31) DA(h60):DT(g30) DA(h61):DT(g29) DC(h62):DG(g28) DC(h63):DC(g27) DT(h64):DC(g26) DC(h65):DT(g25) DG(h66):DT(g24) DG(h67):DG(g23) DA(h68):DC(g22) DG(h69):DA(g21) DA(h70):DT(g20) DA(h71):DC(g19) DT(h72):DG(g18) DC(h73):DA(g17) DT(h74):DC(g16) DC(h75):DT(g15) DC(h76):DC(g14) DG(h77):DC(g13) DA(h78):DG(g12) DG(h79):DG(g11) chainB ( 70) LYS70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) ASN146 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) HIS150 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG153 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) TYR178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LEU182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) LEU184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) SER185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) ARG189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ASN206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) GLN207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) PHE208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ASN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) SER215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) PHE237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) PHE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mgwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvlllettdislttmllkrlidekilvlfcddKRLpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpaNregHaaRsyfntlfgndftreqendinAglnYgytLlLSifaRelvqtgcftqlglkhaNQFNdfnlaSdlmepfrplvdqiiyenrkeaFpimkrklFalFmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi >5xvp_BD: title=E. FAE CAS1-CAS2/PRESPACER/TARGET TERNARY COMPLEX REVEALING THE FULLY INTEGRATED STATES organism=ENTEROCOCCUS FAECALIS TX0027 DNA sequence DG(h10):DG(g80) DG(h11):DA(g79) DC(h12):DG(g78) DC(h13):DC(g77) DT(h14):DC(g76) DC(h15):DT(g75) DA(h16):DC(g74) DG(h17):DT(g73) DC(h18):DT(g72) DT(h19):DA(g71) DA(h20):DG(g70) DC(h21):DA(g69) DG(h22):DG(g68) DT(h23):DG(g67) DT(h24):DC(g66) DC(h25):DT(g65) DC(h26):DC(g64) DG(h27):DC(g63) DT(h28):DA(g62) DT(h29):DA(g61) DT(h30):DA(g60) DT(h31):DA(g59) DA(h32):DT(g58) DG(h33):DC(g57) DA(h34):DT(g56) DG(h35):DC(g55) DT(h36):DA(g54) DC(h37):DG(g53) DA(h38):DT(g52) DT(h39):DA(g51) DG(h40):DC(g50) DT(h41):DA(g49) DT(h42):DA(g48) DG(h43):DC(g47) DT(h44):DA(g46) DT(h45):DA(g45) DT(h46):DA(g44) DA(h47):DT(g43) DG(h48):DC(g42) DA(h49):DT(g41) DA(h50):DT(g40) DT(h51):DA(g39) DG(h52):DC(g38) DG(h53):DC(g37) DT(h54):DA(g36) DA(h55):DT(g35) DC(h56):DG(g34) DC(h57):DG(g33) DA(h58):DT(g32) DA(h59):DT(g31) DA(h60):DT(g30) DA(h61):DT(g29) DC(h62):DG(g28) DC(h63):DC(g27) DT(h64):DC(g26) DC(h65):DT(g25) DG(h66):DT(g24) DG(h67):DG(g23) DA(h68):DC(g22) DG(h69):DA(g21) DA(h70):DT(g20) DA(h71):DC(g19) DT(h72):DG(g18) DC(h73):DA(g17) DT(h74):DC(g16) DC(h75):DT(g15) DC(h76):DC(g14) DG(h77):DC(g13) DA(h78):DG(g12) DG(h79):DG(g11) chainB ( 70) LYS70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) ASN146 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) HIS150 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) ARG153 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) TYR178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LEU182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) LEU184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) SER185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) ARG189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ASN206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) GLN207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) PHE208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ASN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) SER215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) PHE237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) PHE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 70) LYS70 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) ASN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 (150) HIS150 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 (153) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 (174) ALA174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) TYR178 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LEU182 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) LEU184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) SER185 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ASN206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) GLN207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) PHE208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ASN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) SER215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) PHE237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) PHE248 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mgwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvlllettdislttmllkrlidekilvlfcddKRLpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpaNregHaaRsyfntlfgndftreqendinAglnYgytLlLSifaRelvqtgcftqlglkhaNQFNdfnlaSdlmepfrplvdqiiyenrkeaFpimkrklFalFmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi/mgwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvlllettdislttmllkrlidekilvlfcddKRlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpaNregHaaRsyfntlfgndftreqendinAglnYgytLlLSifarelvqtgcftqlglkhaNQFNdfnlaSdlmepfrplvdqiiyenrkeaFpimkrklFalFmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi >5xxp_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF CBNR_DBD-DNA COMPLEX organism=Cupriavidus necator DNA sequence DC(E1):DG(F25) DT(E2):DA(F24) DA(E3):DT(F23) DT(E4):DA(F22) DA(E5):DT(F21) DT(E6):DA(F20) DT(E7):DA(F19) DA(E8):DT(F18) DC(E9):DG(F17) DG(E10):DC(F16) DC(E11):DG(F15) DA(E12):DT(F14) DA(E13):DT(F13) DA(E14):DT(F12) DC(E15):DG(F11) DC(E16):DG(F10) DG(E17):DC(F9) DT(E18):DA(F8) DA(E19):DT(F7) DA(E20):DT(F6) DC(E21):DG(F5) DG(E22):DC(F4) DA(E23):DT(F3) DT(E24):DA(F2) DG(E25):DC(F1) chainA ( 28) SER28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 30) PRO30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 1 0 0 0 0 0 ( 31) PRO31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 33) THR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 2 0 0 0 0 0 0 0 ( 52) HIS52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 4 prot.sequence mefrqlkyfiavaeagnmaaaakrlhvSQPPiTRqmqaleadlgvvllersHrgieltaaghafledarrilelagrsgdrsraaar >5xxp_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF CBNR_DBD-DNA COMPLEX organism=Cupriavidus necator DNA sequence DC(F1):DG(E25) DA(F2):DT(E24) DT(F3):DA(E23) DC(F4):DG(E22) DG(F5):DC(E21) DT(F6):DA(E20) DT(F7):DA(E19) DA(F8):DT(E18) DC(F9):DG(E17) DG(F10):DC(E16) DG(F11):DC(E15) DT(F12):DA(E14) DT(F13):DA(E13) DT(F14):DA(E12) DG(F15):DC(E11) DC(F16):DG(E10) DG(F17):DC(E9) DT(F18):DA(E8) DA(F19):DT(E7) DA(F20):DT(E6) DT(F21):DA(E5) DA(F22):DT(E4) DT(F23):DA(E3) DA(F24):DT(E2) DG(F25):DC(E1) chainA ( 28) SER28 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) PRO30 0 0 0 0 0 1 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) PRO31 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) THR33 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 2 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) HIS52 4 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 28) SER28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 30) PRO30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 1 0 0 0 0 0 ( 31) PRO31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 33) THR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 ( 34) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 2 0 0 0 0 0 0 0 ( 52) HIS52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 prot.sequence mefrqlkyfiavaeagnmaaaakrlhvSQPPiTRqmqaleadlgvvllersHrgieltaaghafledarrilelagrsgdrsraaar/mefrqlkyfiavaeagnmaaaakrlhvSQPPiTRqmqaleadlgvvllersHrgieltaaghafledarrilelagrsgdrsraaar >5xzb_A: title=MOUSE CGAS BOUND TO THE INHIBITOR RU365 organism=Mus musculus DNA sequence DA(E2):DT(F17) DA(E3):DT(F16) DT(E4):DA(F15) DT(E5):DA(F14) DG(E6):DC(F13) DC(E7):DG(F12) DC(E8):DG(F11) DG(E9):DC(F10) DA(E10):DT(F9) DA(E11):DT(F8) DG(E12):DC(F7) DA(E13):DT(F6) DC(E14):DG(F5) DG(E15):DC(F4) chainA ( 13) ARG161 0 0 0 0 0 0 0 0 0 1 4 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyeHvkisapnefdvmfklevprielqeyyetgafylvkfkriprgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifd >5xze_A: title=MOUSE CGAS BOUND TO THE INHIBITOR RU332 organism=Mus musculus DNA sequence DC(F4):DG(E15) DG(F5):DC(E14) DT(F6):DA(E13) DC(F7):DG(E12) DT(F8):DA(E11) DT(F9):DA(E10) DC(F10):DG(E9) DG(F11):DC(E8) DG(F12):DC(E7) DC(F13):DG(E6) DA(F14):DT(E5) DA(F15):DT(E4) DT(F16):DA(E3) DT(F17):DA(E2) chainA ( 13) ARG161 0 0 0 5 1 0 0 0 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkriprgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifd >5xzg_A: title=MOUSE CGAS BOUND TO THE INHIBITOR RU521 organism=Mus musculus DNA sequence DA(E2):DT(F17) DA(E3):DT(F16) DT(E4):DA(F15) DT(E5):DA(F14) DG(E6):DC(F13) DC(E7):DG(F12) DC(E8):DG(F11) DG(E9):DC(F10) DA(E10):DT(F9) DA(E11):DT(F8) DG(E12):DC(F7) DA(E13):DT(F6) DC(E14):DG(F5) DG(E15):DC(F4) chainA ( 13) ARG161 0 0 0 0 0 0 0 0 0 1 4 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyeHvkisapnefdvmfklevprielqeyyetgafylvkfkriprgnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifd >5y0c_A:Histone-fold; title=CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME AT 2.09 ANGSTROM RESOLUTION organism=? DNA sequence DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge >5y0c_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME AT 2.09 ANGSTROM RESOLUTION organism=HOMO SAPIENS DNA sequence DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/SrkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/kkphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiQtavrlllpgelakhavsegtkavtkyts >5y0d_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME CONTAINING THE H2B E76K MUTANT organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 30) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiagkasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/kkphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiagkasrlahynkrstitsreiQtavrlllpgelakhavsegtkavtkyts >5y36_A: title=CRYO-EM STRUCTURE OF SPCAS9-SGRNA-DNA TERNARY COMPLEX organism=STREPTOCOCCUS PYOGENES SEROTYPE M1 DNA sequence DA(C1):DT(D55) DC(C2):DG(D54) DA(C3):DT(D53) DT(C4):DA(D52) DT(C5):DA(D51) DT(C6):DA(D50) DT(C7):DA(D49) DC(C8):DG(D48) DG(C9):DC(D47) DG(C10):DC(D46) DG(C11):DC(D45) DA(C12):DT(D44) DT(C13):DA(D43) DG(C14):DC(D42) DG(C15):DC(D41) DT(C16):DA(D40) DC(C17):DG(D39) DC(C18):DG(D38) DT(C19):DA(D37) chainA (1333) ARG1333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (1335) ARG1335 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 3 0 0 0 (1337) THR1337 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence mdkkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarenqttqkgqknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydvrkmiakseqeigkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfskesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagelqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRyTstkevldatlihqsitglyetridlsqlggd >5y3r_A:SPOC_domain-like;vWA-like; title=CRYO-EM STRUCTURE OF HUMAN DNA-PK HOLOENZYME organism=? DNA sequence DA(D-14):DA(E51) DA(D-13):DT(E50) DA(D-12):DT(E49) DA(D-11):DT(E47) DA(D-10):DT(E46) DC(D-9):DG(E45) DT(D-8):DA(E44) DA(D-7):DT(E43) DT(D-5):DA(E42) DA(D-4):DT(E40) DT(D-3):DA(E39) DT(D-2):DA(E38) DA(D-1):DT(E37) DT(D0):DA(E36) DG(D1):DC(E35) DG(D2):DC(E34) DT(D3):DA(E33) DA(D4):DT(E32) DT(D5):DA(E31) DT(D6):DA(E30) DA(D7):DT(E29) DT(D8):DA(E28) DG(D9):DC(E27) DG(D10):DC(E26) DC(D11):DG(E24) DT(D13):DT(E23) DT(D14):DA(E22) DG(D15):DA(E21) chainA (215) LEU256 0 0 0 0 0 0 0 0 0 0 0 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) GLN278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 (362) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 21 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (363) ARG404 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence grdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisvhfeesskledllrkvraketrkraLsrlklklnkdivisvgiynlvQkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRRnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy >5y3r_ABCK:SPOC_domain-like;vWA-like;Protein_kinase-like_PK-like;ARM_repeat;C-terminal_domain_of_Ku80; title=CRYO-EM STRUCTURE OF HUMAN DNA-PK HOLOENZYME organism=HOMO SAPIENS DNA sequence DG(E18):DC(D18) DC(E19):DG(D17) DT(E20):DG(D16) DA(E21):DG(D15) DA(E22):DT(D14) DT(E23):DT(D13) DG(E24):DC(D12) DG(E25):DC(D11) DC(E26):DG(D10) DC(E27):DG(D9) DA(E28):DT(D8) DT(E29):DA(D7) DA(E30):DT(D6) DA(E31):DT(D5) DT(E32):DA(D4) DA(E33):DT(D3) DC(E34):DG(D2) DC(E35):DG(D1) DA(E36):DT(D0) DT(E37):DA(D-1) DA(E38):DT(D-2) DA(E39):DT(D-3) DT(E40):DA(D-4) DA(E41):DT(D-5) DA(E42):DT(D-6) DT(E43):DA(D-7) DA(E44):DT(D-8) DG(E45):DC(D-9) DT(E46):DA(D-10) DT(E47):DA(D-11) DT(E48):DA(D-12) DT(E49):DA(D-13) DT(E50):DA(D-14) DA(E51):DT(D-15) chainA (215) LEU256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) GLN278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (362) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (363) ARG404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (382) TYR397 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (384) LYS399 0 0 0 0 0 0 0 1 15 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 0 0 0 0 0 55 45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 2) ALA12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 ( 3) ALA13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainC prot.sequence grdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisvhfeesskledllrkvraketrkraLsrlklklnkdivisvgiynlvQkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRRnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaYdKRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplie/csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkryavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqRcKQmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlkdyvdlfrhllssdqmmdsiladeaffsvnssseslnhllydefvksvlkivekldltleiqtvgeqengdeapgvwmiptsdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikykyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsalsdetisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqkeegvsflintfegggcgqpsgilaqptllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgderqclpsldlsckqlasgllelafafgglcegsvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreradswwakdspletkmavlallakilqidssvfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtlesvyemfrkddprlsftrqsfvdrtklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevevpmerkkkyieirkeareaangdsdgpsymsslsyladstlseemsqfdfstgvqsysyssqdprpatgrfrrreqrdptvhddvlelemdelnrhecmapltalvkhmhrslgppqgeedsvprdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrllpaelpakrvrgkarlppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltpisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarriviaglyqrafqhlseavqaaeeeaqppswscgpaagvidaymtladfcdqqlrkeeenasvidsaelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/aAAaaaaaaaaaaaa >5y3r_B:SPOC_domain-like;vWA-like; title=CRYO-EM STRUCTURE OF HUMAN DNA-PK HOLOENZYME organism=? DNA sequence DG(E18):DC(D18) DC(E19):DG(D17) DT(E20):DG(D16) DA(E21):DG(D15) DA(E22):DT(D14) DT(E23):DT(D13) DG(E24):DC(D12) DG(E25):DC(D11) DC(E26):DG(D10) DC(E27):DG(D9) DA(E28):DT(D8) DT(E29):DA(D7) DA(E30):DT(D6) DA(E31):DT(D5) DT(E32):DA(D4) DA(E33):DT(D3) DC(E34):DG(D2) DC(E35):DG(D1) DA(E36):DT(D0) DT(E37):DA(D-1) DA(E38):DT(D-2) DA(E39):DT(D-3) DT(E40):DA(D-4) DA(E41):DT(D-5) DA(E42):DT(D-6) DT(E43):DA(D-7) DA(E44):DT(D-8) DG(E45):DC(D-9) DT(E46):DA(D-10) DT(E47):DA(D-11) DT(E48):DA(D-12) DT(E49):DA(D-13) DT(E50):DA(D-14) DA(E51):DT(D-15) chainB (382) TYR397 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (384) LYS399 0 0 0 0 0 0 0 1 15 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 0 0 0 0 0 55 45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaYdKRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplie >5y3r_K: title=CRYO-EM STRUCTURE OF HUMAN DNA-PK HOLOENZYME organism=HOMO SAPIENS DNA sequence DG(E18):DC(D18) DC(E19):DG(D17) DT(E20):DG(D16) DA(E21):DG(D15) DA(E22):DT(D14) DT(E23):DT(D13) DG(E24):DC(D12) DG(E25):DC(D11) DC(E26):DG(D10) DC(E27):DG(D9) DA(E28):DT(D8) DT(E29):DA(D7) DA(E30):DT(D6) DA(E31):DT(D5) DT(E32):DA(D4) DA(E33):DT(D3) DC(E34):DG(D2) DC(E35):DG(D1) DA(E36):DT(D0) DT(E37):DA(D-1) DA(E38):DT(D-2) DA(E39):DT(D-3) DT(E40):DA(D-4) DA(E41):DT(D-5) DA(E42):DT(D-6) DT(E43):DA(D-7) DA(E44):DT(D-8) DG(E45):DC(D-9) DT(E46):DA(D-10) DT(E47):DA(D-11) DT(E48):DA(D-12) DT(E49):DA(D-13) DT(E50):DA(D-14) DA(E51):DT(D-15) chainK ( 2) ALA12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 ( 3) ALA13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence aAAaaaaaaaaaaaa >5y7g_B: title=CRYSTAL STRUCTURE OF PAFAN1 BOUND TO 1NT 5'FLAP DNA WITH GAP organism=? DNA sequence DG(G1):DC(L12) DA(G2):DT(L11) DA(G3):DT(L10) DT(G4):DA(L9) DG(G5):DC(L8) DT(G6):DA(L7) DG(G7):DC(L6) DT(G8):DA(L5) DG(G9):DC(L4) DT(G10):DA(L3) DC(G11):DG(L2) chainB (512) ASP528 0 0 0 0 0 0 0 3 0 0 0 (515) GLN531 0 0 0 0 0 0 0 2 1 0 0 prot.sequence pepfyylhnfravlawigeryadllddqerafiaafaelpeasqallvrmvmrkgtlfregklayaeigdtraavqpllalgwvdaqptlelaqlfgllkkdelsqlfrdhlgranlrkdallerlqplfpearrlaewqadfaepvyelrcmalcdrlrlmyfgnlwqdwsefvladlgiyryesvefsadsrgfrlradvdaylhlfdcrqrfdlgepleellaglpgepyanpwlegrrvkllfqfaqhcekqrdfdlaqrlyrqsshpgarlrairslergerfaeahalareascapesdaerqglarllprlqgklglprqaraaapeidrldlclafpsepcsvewavrehleepgcavhyvenglinslfgllcweaifaaipgaffhpfhsapadlhsadfrqrraalfeaclgrledgsyrdaircryrdkfglqspfvywellgeelleqaldclpaahlrawferlledipgnraglpdliqfwpaqrryrmvevkgpgDrlQdnqlrwlqfcrerempvavcyvrwhvdd >5y7q_A: title=CRYSTAL STRUCTURE OF PAFAN1 BOUND TO 2NT 5'FLAP DNA WITH GAP organism=? DNA sequence DG(D1):DC(C22) DT(D2):DA(C21) DT(D3):DA(C20) DG(D4):DC(C19) DG(D5):DC(C18) DG(D6):DC(C17) DA(D7):DT(C16) DT(D8):DA(C15) DT(D9):DA(C14) DG(D10):DC(C13) chainA ( 1) PRO14 0 0 0 0 0 0 0 0 0 2 ( 8) TYR21 0 0 0 0 0 0 0 0 0 5 (178) VAL191 0 0 0 0 0 0 0 0 0 6 (179) LEU192 0 0 0 0 0 0 0 0 0 14 (182) LEU195 0 0 0 0 0 0 0 0 0 5 (184) ILE197 0 0 0 0 0 0 0 0 0 8 (185) TYR198 0 0 0 0 0 0 0 0 0 2 prot.sequence PalpepfYylhnfravlawigeryadllddqerafiaafaelpeasqallvrmvmrkgtlfregklayaeigdtraavqpllalgwvdaqptlelaqlfgllkkdelsqlfrdhlgranlrkdallerlqplfpearrlaewqadfaepvyelrcmalcdrlrlmyfgnlwqdwsefVLadLgIYryesvefsadsrgfrlradvdaylhlfdcrqrfdlgepleellaglpgepyanpwlegrrvkllfqfaqhcekqrdfdlaqrlyrqsshpgarlrairslergerfaeahalareascapesdaerqglarllprlqgklglprqaraaapeidrldlclafpsepcsvewavrehleepgcavhyvenglinslfgllcweaifaaipgaffhpfhsapadlhsadfrqrraalfeaclgrledgsyrdaircryrdkfglqspfvywellgeelleqaldclpaahlrawferlledipgnraglpdliqfwpaqrryrmvevkgpgdrlqdnqlrwlqfcrerempvavcyvrwhvdd >5ybb_DG: title=STRUCTURAL BASIS UNDERLYING COMPLEX ASSEMBLY ANDCONFORMATIONAL TRANSITION OF THE TYPE I R-M SYSTEM organism=? DNA sequence DC(H1):DG(I21) DT(H2):DA(I20) DG(H3):DC(I19) DC(H4):DG(I18) DG(H5):DC(I17) DA(H6):DT(I16) DG(H7):DC(I15) DG(H8):DC(I14) DT(H9):DA(I13) DC(H10):DG(I12) DA(H11):DT(I11) DA(H12):DT(I10) DG(H13):DC(I9) DG(H14):DC(I8) DT(H15):DA(I7) DC(H16):DG(I6) DA(H17):DT(I5) DC(H18):DG(I4) DG(H19):DC(I3) DT(H20):DA(I2) DG(H21):DC(I1) chainD ( 22) ARG26 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 ( 61) SER65 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG66 0 0 0 0 0 10 17 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG82 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) TYR142 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 22) ARG26 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 61) SER65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 62) ARG66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 18 14 0 0 0 0 ( 77) THR81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 78) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 0 0 (138) TYR142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 prot.sequence pyklppgwrwvrlgevclpteRrdptknpstyfvyvdisaidstvgkivspkeilgqhapSRarkvirsgdvifattRpylknialvppdldgqicstgfcviranrefaepeflfhlcrsdfitnqltaskmrgtsYpavtdndvyntliplppleeqrrivakvealmervrevrrlraeaqkdtellmqtalaevfphpgadlppgwrwvrlgevcdiimgqsppsstynfegnglpffqgkadfgdlhptpriwcsapqkvarpgdvlisvrapvgstnvanlaccigrglaalrprdslerfwllyylhylepelskmtfnaitkkdlqnvfiplppleeqrrivayldqiqqqvaalkraqaeteaelkrleqaildkafrgdl/pyklppgwrwvrlgevclpteRrdptknpstyfvyvdisaidstvgkivspkeilgqhapSRarkvirsgdvifatTRpylknialvppdldgqicstgfcviranrefaepeflfhlcrsdfitnqltaskmrgtsYpavtdndvyntliplppleeqrrivakvealmervrevrrlraeaqkdtellmqtalaevfphpgadlppgwrwvrlgevcdiimgqsppsstynfegnglpffqgkadfgdlhptpriwcsapqkvarpgdvlisvrapvgstnvanlaccigrglaalrprdslerfwllyylhylepelskmtfnaitkkdlqnvfiplppleeqrrivayldqiqqqvaalkraqaeteaelkrleqaildkafrgdl >5ybb_G:DNA_methylase_specificity_domain; title=STRUCTURAL BASIS UNDERLYING COMPLEX ASSEMBLY ANDCONFORMATIONAL TRANSITION OF THE TYPE I R-M SYSTEM organism=? DNA sequence DC(H1):DG(I21) DT(H2):DA(I20) DG(H3):DC(I19) DC(H4):DG(I18) DG(H5):DC(I17) DA(H6):DT(I16) DG(H7):DC(I15) DG(H8):DC(I14) DT(H9):DA(I13) DC(H10):DG(I12) DA(H11):DT(I11) DA(H12):DT(I10) DG(H13):DC(I9) DG(H14):DC(I8) DT(H15):DA(I7) DC(H16):DG(I6) DA(H17):DT(I5) DC(H18):DG(I4) DG(H19):DC(I3) DT(H20):DA(I2) DG(H21):DC(I1) chainG ( 22) ARG26 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 61) SER65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 62) ARG66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 18 14 0 0 0 0 ( 77) THR81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 78) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 0 0 (138) TYR142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 prot.sequence pyklppgwrwvrlgevclpteRrdptknpstyfvyvdisaidstvgkivspkeilgqhapSRarkvirsgdvifatTRpylknialvppdldgqicstgfcviranrefaepeflfhlcrsdfitnqltaskmrgtsYpavtdndvyntliplppleeqrrivakvealmervrevrrlraeaqkdtellmqtalaevfphpgadlppgwrwvrlgevcdiimgqsppsstynfegnglpffqgkadfgdlhptpriwcsapqkvarpgdvlisvrapvgstnvanlaccigrglaalrprdslerfwllyylhylepelskmtfnaitkkdlqnvfiplppleeqrrivayldqiqqqvaalkraqaeteaelkrleqaildkafrgdl >5ybd_A:"Winged_helix"_DNA-binding_domain; title=X-RAY STRUCTURE OF ETS DOMAIN OF ERGP55 IN COMPLEX WITH E74DNA organism=Homo sapiens DNA sequence DA(C15):DT(B10) DC(C16):DG(B9) DT(C17):DA(B8) DT(C18):DA(B7) DC(C19):DG(B6) DC(C20):DG(B5) DG(C21):DC(B4) DG(C22):DC(B3) DT(C23):DA(B2) chainA ( 53) ASP363 0 0 0 0 3 7 0 0 0 ( 54) LYS364 0 0 0 3 0 0 0 0 0 ( 57) ARG367 0 0 1 10 17 25 0 0 0 ( 60) ARG370 0 0 0 0 0 10 16 0 0 ( 61) TYR371 0 1 9 6 1 0 0 0 0 prot.sequence iqlwqfllellsdssnsscitwegtngefkmtdpdevarrwgerkskpnmnyDKlsRalRYyydknimtkvhgkryaykfdfhgiaqallehhhhh >5yef_J:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF CTCF ZFS2-8-HS5-1AE organism=Homo sapiens DNA sequence DC(L2):DG(K28) DT(L3):DA(K27) DT(L4):DA(K26) DT(L5):DA(K25) DA(L6):DT(K24) DA(L7):DT(K23) DC(L8):DG(K22) DC(L9):DG(K21) DA(L10):DT(K20) DG(L11):DC(K19) DC(L12):DG(K18) DA(L13):DT(K17) DG(L14):DC(K16) DA(L15):DT(K15) DG(L16):DC(K14) DG(L17):DC(K13) DG(L18):DC(K12) DC(L19):DG(K11) DG(L20):DC(K10) DA(L21):DT(K9) DG(L22):DC(K8) DT(L23):DA(K7) DC(L24):DG(K6) DG(L25):DC(K5) DA(L26):DT(K4) DC(L27):DG(K3) DT(L28):DA(K2) chainJ ( 17) ARG339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 8 1 0 0 0 0 0 0 0 ( 21) TYR343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 40) GLU362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 42) SER364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 43) LYS365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 2 0 0 0 0 0 0 0 0 0 ( 46) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 70) TYR392 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 6 0 0 0 0 0 0 0 0 0 0 0 ( 71) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG396 0 0 0 0 0 0 0 0 0 0 0 16 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) GLN418 0 0 0 0 0 0 0 0 0 0 13 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) SER419 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) THR421 0 0 0 0 0 0 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) ARG448 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) SER450 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) ASP451 0 0 0 0 0 0 4 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) VAL454 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phkcpdcdmafvgelvRhrrYkhthekpfkcsmcdyasvEvSKlkRhirshtgerpfqcslcsyasrdTYKlkRhmrthsgekpyecyicharftQSgTmkmhilqkhtenvakfhcphcdtviaRkSDlgVhlrkqhsyieqgkkcrycdavfheryaliqhqksh >5yeg_B:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF CTCF ZFS4-8-HS5-1A COMPLEX organism=? DNA sequence DC(F2):DG(E20) DT(F3):DA(E19) DT(F4):DA(E18) DT(F5):DA(E17) DA(F6):DT(E16) DA(F7):DT(E15) DC(F8):DG(E14) DC(F9):DG(E13) DA(F10):DT(E12) DG(F11):DC(E11) DC(F12):DG(E10) DA(F13):DT(E9) DG(F14):DC(E8) DA(F15):DT(E7) DG(F16):DC(E6) DG(F17):DC(E5) DG(F18):DC(E4) DC(F19):DG(E3) DG(F20):DC(E2) chainB ( 14) GLU362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 ( 16) SER364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 17) LYS365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 6 0 ( 20) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 1 0 0 ( 44) TYR392 0 0 0 0 0 0 0 0 0 0 0 0 0 8 19 6 0 0 0 ( 45) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 ( 48) ARG396 0 0 0 0 0 0 0 0 0 0 0 19 13 2 0 0 0 0 0 ( 69) THR417 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 70) GLN418 0 0 0 0 0 0 0 0 0 0 19 10 0 0 0 0 0 0 0 ( 73) THR421 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 (100) ARG448 0 0 0 0 0 0 0 12 2 0 0 0 0 0 0 0 0 0 0 (102) SER450 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (103) ASP451 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 (106) VAL454 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence kpfkcsmcdyasvEvSKlkRhirshtgerpfqcslcsyasrDTYKlkRhmrthsgekpyecyicharfTQsgTmkmhilqkhtenvakfhcphcdtviaRkSDlgVhlrkqhsyieqgkkcrycdavfheryaliqhqksh >5yeh_A:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF CTCF ZFS4-8-ECBS organism=Homo sapiens DNA sequence DC(D2):DG(C20) DG(D3):DC(C19) DC(D4):DG(C18) DC(D5):DG(C17) DC(D6):DG(C16) DT(D7):DA(C15) DC(D8):DG(C14) DT(D9):DA(C13) DA(D10):DT(C12) DG(D11):DC(C11) DC(D12):DG(C10) DG(D13):DC(C9) DG(D14):DC(C8) DA(D15):DT(C7) DA(D16):DT(C6) DA(D17):DT(C5) DC(D18):DG(C4) DC(D19):DG(C3) DG(D20):DC(C2) chainA ( 14) GLU362 11 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG368 0 0 1 14 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG389 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ASP390 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TYR392 0 0 0 9 21 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) LYS393 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG396 0 0 0 0 0 2 12 19 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR417 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 70) GLN418 0 0 0 0 0 0 0 10 11 0 0 0 0 0 0 0 0 0 0 ( 73) THR421 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 (100) ARG448 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (102) SER450 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 (103) ASP451 0 0 0 0 0 0 0 0 0 0 1 10 5 0 0 0 0 0 0 prot.sequence kpfkcsmcdyasvEvsklkRhirshtgerpfqcslcsyasRDtYKlkRhmrthsgekpyecyicharfTQsgTmkmhilqkhtenvakfhcphcdtviaRkSDlgvhlrkqhsyieqgkkcrycdavfheryaliqhqk >5yej_B:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF BIOQ WITH ITS NATUREL DOUBLE-STRANDED DNA OPERATOR organism=Mycobacterium smegmatis DNA sequence DA(D2):DT(F36) DC(D3):DG(F35) DC(D4):DG(F34) DT(D5):DA(F33) DG(D6):DC(F32) DA(D7):DT(F31) DA(D8):DT(F30) DC(D9):DG(F29) DA(D10):DT(F28) DC(D11):DG(F27) DC(D12):DG(F26) DG(D13):DC(F25) DT(D14):DA(F24) DT(D15):DA(F23) DC(D16):DG(F22) DA(D17):DT(F21) DA(D18):DT(F20) DG(D19):DC(F19) DT(D20):DA(F18) chainB ( 25) MET26 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 26) ARG27 0 0 0 0 0 0 0 0 0 0 11 14 5 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 ( 36) PRO37 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 38) ALA39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 ( 41) TRP42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 15 0 prot.sequence qlhkpdvvaaatkilddhgiadltMRrlareldvTPgAlYWhfankqellgavadhilrtartdtdlawreqihescralrdallshtdgaelvsasfasgqsvviteiveqlgraaraagvsdadvdaaartviyyvlgftvdeqsrrqfrfglqllvdglaah >5yej_BC:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF BIOQ WITH ITS NATUREL DOUBLE-STRANDED DNA OPERATOR organism=Mycobacterium smegmatis DNA sequence DA(F18):DT(D20) DC(F19):DG(D19) DT(F20):DA(D18) DT(F21):DA(D17) DG(F22):DC(D16) DA(F23):DT(D15) DA(F24):DT(D14) DC(F25):DG(D13) DG(F26):DC(D12) DG(F27):DC(D11) DT(F28):DA(D10) DG(F29):DC(D9) DT(F30):DA(D8) DT(F31):DA(D7) DC(F32):DG(D6) DA(F33):DT(D5) DG(F34):DC(D4) DG(F35):DC(D3) DT(F36):DA(D2) chainB ( 25) MET26 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG27 0 0 0 0 0 0 5 14 11 0 0 0 0 0 0 0 0 0 0 ( 35) THR36 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) PRO37 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ALA39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TRP42 0 15 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 26) ARG27 0 0 0 0 0 0 0 0 0 0 10 11 3 0 0 0 0 0 0 ( 35) THR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 ( 36) PRO37 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 40) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 ( 41) TRP42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 prot.sequence qlhkpdvvaaatkilddhgiadltMRrlareldvTPgAlYWhfankqellgavadhilrtartdtdlawreqihescralrdallshtdgaelvsasfasgqsvviteiveqlgraaraagvsdadvdaaartviyyvlgftvdeqsrrqfrfglqllvdglaah/qlhkpdvvaaatkilddhgiadltmRrlareldvTPgalYWhfankqellgavadhilrtartdtadlawreqihescralrdallshtdgaelvsasfasgqsvviteiveqlgraaraagvsdadvdaaartviyyvlgftvdeqsrlqwrqfrfglqllvdglaah >5yel_A:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF CTCF ZFS6-11-GB7CSE organism=Homo sapiens DNA sequence DT(F2):DA(E26) DT(F3):DA(E25) DG(F4):DC(E24) DC(F5):DG(E23) DA(F6):DT(E22) DG(F7):DC(E21) DT(F8):DA(E20) DA(F9):DT(E19) DC(F10):DG(E18) DC(F11):DG(E17) DA(F12):DT(E16) DC(F13):DG(E15) DA(F14):DT(E14) DT(F15):DA(E13) DT(F16):DA(E12) DT(F17):DA(E11) DA(F18):DT(E10) DA(F19):DT(E9) DC(F20):DG(E8) DC(F21):DG(E7) DA(F22):DT(E6) DG(F23):DC(E5) DC(F24):DG(E4) DA(F25):DT(E3) DG(F26):DC(E2) chainA ( 16) THR421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 40) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 ( 42) SER450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 ( 43) ASP451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 1 0 0 0 0 ( 98) GLN506 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ARG508 0 0 0 0 0 0 0 6 14 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) HIS509 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) MET512 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) GLN534 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) LEU537 0 0 0 0 0 2 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) LEU538 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) THR565 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ARG566 0 12 14 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pyecyicharftqsgtmkmhilqkhvakfhcphcdtviarksDlgvhlrkqhsyieqgkkcrycdavfheryaliqhqkshknekrfkcdqcdyasrqeRhmimhkrthtgkpyacshcdktfrqkqlldmhfkryhdpvpaafvcskcgktftRrntmarhadnc >5yi2_EF:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF LACTOCOCCUS LACTIS ZITR, WILD TYPE IN COMPLEX WITH DNA organism=Lactococcus lactis subsp. lactis DNA sequence DT(H1):DA(G16) DG(H2):DC(G15) DT(H3):DA(G14) DT(H4):DA(G13) DA(H5):DT(G12) DA(H6):DT(G11) DC(H7):DG(G10) DT(H8):DA(G9) DA(H9):DT(G8) DG(H10):DC(G7) DT(H11):DA(G6) DT(H12):DA(G5) DA(H13):DT(G4) DA(H14):DT(G3) DC(H15):DG(G2) DA(H16):DT(G1) chainE ( 64) SER64 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 65) PRO65 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ALA66 0 0 0 3 4 2 0 0 0 0 0 0 0 0 0 0 ( 67) ALA67 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 69) THR69 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LYS70 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 chainF ( 63) SER64 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 65) ALA66 0 0 0 0 0 0 0 0 0 0 1 3 4 1 0 0 ( 66) ALA67 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 68) THR69 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 69) LYS70 0 0 0 0 0 0 0 0 0 6 3 0 1 0 0 0 prot.sequence gmslanqidqflgtimqfaenkheillgkcesdvkltstqehilmllaeqistnakiaeklkiSPAAvTKalkklqeqelikssratndervvlwsltekavpvakehathhektlstyqelgnkftdeeqeviskflsalteefq/mslanqidqflgtimqfaenkheillgkcesdvkltstqehilmllaeqistnakiaeklkiSPAAvTKalkklqeqelikssratndervvlwsltekavpvakehathhektlstyqelgnkftdeeqeviskflsalteefq >5yi2_J:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF LACTOCOCCUS LACTIS ZITR, WILD TYPE IN COMPLEX WITH DNA organism=Lactococcus lactis subsp. lactis DNA sequence DT(K1):DA(L16) DG(K2):DC(L15) DT(K3):DA(L14) DT(K4):DA(L13) DA(K5):DT(L12) DA(K6):DT(L11) DC(K7):DG(L10) DT(K8):DA(L9) DA(K9):DT(L8) DG(K10):DC(L7) DT(K11):DA(L6) DT(K12):DA(L5) DA(K13):DT(L4) DA(K14):DT(L3) DC(K15):DG(L2) DA(K16):DT(L1) chainJ ( 63) SER64 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ALA66 0 0 0 3 4 2 0 0 0 0 0 0 0 0 0 0 ( 66) ALA67 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 68) THR69 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) LYS70 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 prot.sequence mslanqidqflgtimqfaenkheillgkcesdvkltstqehilmllaeqistnakiaeklkiSPAAvTKalkklqeqelikssratndervvlwsltekavpvakehathhektlstyqelgnkftdeeqeviskflsalteefq >5yi3_I:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF LACTOCOCCUS LACTIS ZITR, C30S MUTANT IN COMPLEX WITH DNA organism=Lactococcus lactis subsp. lactis (strain IL1403) / Lactococcus lactis subsp. lactis (strain IL1403) DNA sequence DT(K1):DA(L16) DG(K2):DC(L15) DT(K3):DA(L14) DT(K4):DA(L13) DA(K5):DT(L12) DA(K6):DT(L11) DC(K7):DG(L10) DT(K8):DA(L9) DA(K9):DT(L8) DG(K10):DC(L7) DT(K11):DA(L6) DT(K12):DA(L5) DA(K13):DT(L4) DA(K14):DT(L3) DC(K15):DG(L2) DA(K16):DT(L1) chainI ( 63) SER64 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 ( 65) ALA66 0 0 0 0 0 0 0 0 0 0 4 3 4 0 0 0 ( 66) ALA67 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 68) THR69 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 ( 69) LYS70 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 prot.sequence mslanqidqflgtimqfaenkheillgksesdvkltstqehilmllaeqistnakiaeklkiSPAAvTKalkklqeqelikssratndervvlwsltekavpvakehathhektlstyqelgnkftdeeqeviskflsalteefq >5yi3_IJ:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF LACTOCOCCUS LACTIS ZITR, C30S MUTANT IN COMPLEX WITH DNA organism=Lactococcus lactis subsp. lactis (strain IL1403) / Lactococcus lactis subsp. lactis (strain IL1403) / Lactococcus lactis subsp. lactis (strain IL1403) / Lactococcus lactis subsp. lactis (strain IL1403) DNA sequence DT(L1):DA(K16) DG(L2):DC(K15) DT(L3):DA(K14) DT(L4):DA(K13) DA(L5):DT(K12) DA(L6):DT(K11) DC(L7):DG(K10) DT(L8):DA(K9) DA(L9):DT(K8) DG(L10):DC(K7) DT(L11):DA(K6) DT(L12):DA(K5) DA(L13):DT(K4) DA(L14):DT(K3) DC(L15):DG(K2) DA(L16):DT(K1) chainI ( 63) SER64 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 64) PRO65 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ALA66 0 0 0 4 3 4 0 0 0 0 0 0 0 0 0 0 ( 66) ALA67 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 68) THR69 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) LYS70 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 chainJ ( 63) SER64 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 64) PRO65 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 65) ALA66 0 0 0 0 0 0 0 0 0 0 2 4 4 1 0 0 ( 66) ALA67 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 68) THR69 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 ( 69) LYS70 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 prot.sequence mslanqidqflgtimqfaenkheillgksesdvkltstqehilmllaeqistnakiaeklkiSPAAvTKalkklqeqelikssratndervvlwsltekavpvakehathhektlstyqelgnkftdeeqeviskflsalteefq/mslanqidqflgtimqfaenkheillgksesdvkltstqehilmllaeqistnakiaeklkiSPAAvTKalkklqeqelikssratndervvlwsltekavpvakehathhektlstyqelgnkftdeeqeviskflsalteefq >5yiv_C:post-AAA+_oligomerization_domain-like; title=CAULOBACTER CRESCENTUS GCRA DNA-BINDING DOMAIN(DBD) IN COMPLEX WITH METHYLATED DSDNA(CRYSTAL FORM 1) organism=Caulobacter crescentus (strain NA1000 / CB15N) / Caulobacter crescentus (strain NA1000 / CB15N) DNA sequence DT(I3):DC(J-4) DG(I4):DT(J-5) DT(I6):DA(J-6) DT(I7):6MA(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(L-10):DC(J-10) DC(L-9):DG(K9) DG(L-8):DC(K8) 6MA(L-7):DT(K7) DA(L-6):DT(K6) DT(L-5):DT(J-5) DC(L-4):DG(K4) DA(L-3):DT(K3) DG(L-2):DC(K2) chainC ( 33) ARG33 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ASN34 0 1 6 7 0 0 0 0 0 0 0 1 0 0 0 ( 37) ILE37 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) HIS41 0 0 18 2 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 prot.sequence mswtdervstlkklwldglsasqiakqlggvtRNavIgkvHRlgl >5yiw_A:post-AAA+_oligomerization_domain-like; title=CAULOBACTER CRESCENTUS GCRA DNA-BINDING DOMAIN (DBD) IN COMPLEX WITH METHYLATED DSDNA (CRYSTAL FORM 2) organism=Caulobacter crescentus (strain NA1000 / CB15N) / Caulobacter crescentus (strain NA1000 / CB15N) DNA sequence DC(D2):DG(E-2) DC(D3):DG(E-3) DT(D4):DA(E-4) DG(D5):DC(E-5) 6MA(D6):DT(E-6) DT(D7):DA(E-7) DT(D8):6MA(E-8) DC(D9):DG(E-9) DG(D10):DC(E-10) DC(D11):DG(E-11) chainA ( 33) ARG33 0 0 13 10 5 0 0 0 0 0 ( 34) ASN34 0 0 0 0 3 11 8 0 0 0 ( 37) ILE37 0 0 0 3 4 1 0 0 0 0 ( 41) HIS41 0 0 0 0 0 4 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 5 10 0 prot.sequence mswtdervstlkklwldglsasqiakqlggvtRNavIgkvHRlgl >5yiw_AC:post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like; title=CAULOBACTER CRESCENTUS GCRA DNA-BINDING DOMAIN (DBD) IN COMPLEX WITH METHYLATED DSDNA (CRYSTAL FORM 2) organism=Caulobacter crescentus (strain NA1000 / CB15N) / Caulobacter crescentus (strain NA1000 / CB15N) / Caulobacter crescentus (strain NA1000 / CB15N) / Caulobacter crescentus (strain NA1000 / CB15N) DNA sequence DG(E-11):DC(D11) DC(E-10):DG(D10) DG(E-9):DC(D9) 6MA(E-8):DT(D8) DA(E-7):DT(D7) DT(E-6):6MA(D6) DC(E-5):DG(D5) DA(E-4):DT(D4) DG(E-3):DC(D3) DG(E-2):DC(D2) chainA ( 33) ARG33 0 0 0 0 0 5 10 13 0 0 ( 34) ASN34 0 0 0 8 11 3 0 0 0 0 ( 37) ILE37 0 0 0 0 1 4 3 0 0 0 ( 41) HIS41 0 0 0 0 4 0 0 0 0 0 ( 42) ARG42 0 10 5 0 0 0 0 0 0 0 chainC ( 26) LYS26 0 0 0 0 0 0 11 11 0 0 prot.sequence mswtdervstlkklwldglsasqiakqlggvtRNavIgkvHRlgl/mswtdervstlkklwldglsasqiaKqlggvtrnavigkvhrlgl >5yj3_CD:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF TZAP AND TELOMERIC DNA COMPLEX organism=Homo sapiens DNA sequence DG(B2):DC(A18) DT(B3):DA(A17) DT(B4):DA(A16) DA(B5):DT(A15) DG(B6):DC(A14) DG(B7):DC(A13) DG(B8):DC(A12) DT(B9):DA(A11) DT(B10):DA(A10) DA(B11):DT(A9) DG(B12):DC(A8) DG(B13):DC(A7) DG(B14):DC(A6) DT(B15):DA(A5) DT(B16):DA(A4) DA(B17):DT(A3) DG(B18):DC(A2) chainC ( 44) HIS592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 ( 47) ARG595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 10 ( 63) ARG611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 ( 66) ARG614 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 chainD ( 41) ARG589 0 0 0 0 0 0 0 0 0 0 0 20 12 6 0 0 0 ( 44) HIS592 0 0 0 0 0 0 0 0 0 0 8 13 0 0 0 0 0 ( 47) ARG595 0 0 0 0 0 0 0 0 0 18 10 2 0 0 0 0 0 ( 63) ARG611 0 0 0 0 0 0 0 9 7 3 0 0 0 0 0 0 0 ( 66) ARG614 0 0 0 0 0 0 0 0 4 6 12 0 0 0 0 0 0 prot.sequence phfcqicgktfkaveqlrvhvrrhkgvrkfectecgykftrqaHlrRhmeihdrvenynprqRklRnlii/phfcqicgktfkaveqlrvhvrrhkgvrkfectecgykftRqaHlrRhmeihdrvenynprqRklR >5yj3_D:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF TZAP AND TELOMERIC DNA COMPLEX organism=Homo sapiens DNA sequence DG(B2):DC(A18) DT(B3):DA(A17) DT(B4):DA(A16) DA(B5):DT(A15) DG(B6):DC(A14) DG(B7):DC(A13) DG(B8):DC(A12) DT(B9):DA(A11) DT(B10):DA(A10) DA(B11):DT(A9) DG(B12):DC(A8) DG(B13):DC(A7) DG(B14):DC(A6) DT(B15):DA(A5) DT(B16):DA(A4) DA(B17):DT(A3) DG(B18):DC(A2) chainD ( 41) ARG589 0 0 0 0 0 0 0 0 0 0 0 20 12 6 0 0 0 ( 44) HIS592 0 0 0 0 0 0 0 0 0 0 8 13 0 0 0 0 0 ( 47) ARG595 0 0 0 0 0 0 0 0 0 18 10 2 0 0 0 0 0 ( 63) ARG611 0 0 0 0 0 0 0 9 7 3 0 0 0 0 0 0 0 ( 66) ARG614 0 0 0 0 0 0 0 0 4 6 12 0 0 0 0 0 0 prot.sequence phfcqicgktfkaveqlrvhvrrhkgvrkfectecgykftRqaHlrRhmeihdrvenynprqRklR >5ytc_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH THE UNNATURAL BASE M-FC PAIR WITH DATP IN THE ACTIVE SITE organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (247) LYS540 0 0 0 0 0 0 0 4 6 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 0 4 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 (290) ASN583 0 0 0 0 0 0 0 0 2 10 1 (461) GLN754 0 0 0 0 0 0 0 0 0 0 1 (491) HIS784 0 0 0 0 0 0 0 0 0 0 2 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >5ytd_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH THE NATURAL BASE PAIR 5FC:DGTP organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (247) LYS540 0 0 0 0 0 0 0 4 5 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 0 4 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 (290) ASN583 0 0 0 0 0 0 0 0 1 11 1 (491) HIS784 0 0 0 0 0 0 0 0 0 0 1 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >5yte_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH WITH NATURAL DT:DATP BASE PAIR organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (247) LYS540 0 0 0 0 0 0 0 4 5 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 0 5 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 (290) ASN583 0 0 0 0 0 0 0 0 1 10 1 (461) GLN754 0 0 0 0 0 0 0 0 0 0 1 (491) HIS784 0 0 0 0 0 0 0 0 0 0 1 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >5ytf_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS HOST-GUEST COMPLEX WITH THE UNNATURAL BASE M-FC PAIR WITH DA organism=Thermus aquaticus DNA sequence DA(B102):DC(C216) DC(B103):DT(C215) DC(B104):DG(C214) DA(B105):DG(C213) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (247) LYS540 0 0 0 0 0 0 4 5 1 0 (280) ARG573 0 0 0 0 0 0 0 0 0 4 (287) ASN580 0 0 0 0 0 0 0 0 1 0 (290) ASN583 0 0 0 0 0 0 0 2 10 1 (461) GLN754 0 0 0 0 0 0 0 0 0 1 (491) HIS784 0 0 0 0 0 0 0 0 0 1 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >5ytg_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS HOST-GUEST COMPLEX WITH THE UNNATURAL BASE I-FC PAIR WITH DA organism=Thermus aquaticus DNA sequence DA(B102):DC(C216) DC(B103):DT(C215) DC(B104):DG(C214) DA(B105):DG(C213) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (247) LYS540 0 0 0 0 0 0 4 5 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 4 (287) ASN580 0 0 0 0 0 0 0 0 1 0 (290) ASN583 0 0 0 0 0 0 0 1 10 1 (491) HIS784 0 0 0 0 0 0 0 0 0 1 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >5yth_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS HOST-GUEST COMPLEX WITH THE UNNATURAL BASE M-FC PAIR WITH DG organism=Thermus aquaticus DNA sequence DG(C206):DC(B111) DC(C207):DG(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DG(C213):DG(B105) DG(C214):DC(B104) DT(C215):DC(B103) DC(C216):DA(B102) chainA (247) LYS540 0 0 5 4 0 0 0 0 0 0 (280) ARG573 3 0 0 0 0 0 0 0 0 0 (287) ASN580 0 1 0 0 0 0 0 0 0 0 (290) ASN583 1 10 0 0 0 0 0 0 0 0 (461) GLN754 1 0 0 0 0 0 0 0 0 0 (491) HIS784 1 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlkstyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >5yur_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 1 organism=ESCHERICHIA COLI K-12 DNA sequence DG(C860):DC(B854) DG(C861):DC(B853) DG(C862):DC(B852) DT(C863):DA(B851) DC(C864):DG(B850) DC(C865):DG(B849) DT(C866):DA(B848) DA(C867):DT(B847) DG(C868):DC(B846) DG(C869):DC(B845) DA(C870):DT(B844) DC(C871):DG(B843) DC(C872):DG(B842) DC(C873):DG(B841) TTP(A401):DA(B840) chainA ( 9) ASP8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 11) ASP10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 12) CYS11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 13) PHE12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 14) PHE13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 41) VAL40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 43) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 44) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 50) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 56) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 57) ALA56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (104) ASP103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (105) GLU104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (158) LYS157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (247) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (286) ARG285 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvKlkfddfqqttqEhvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yus_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 2 organism=ESCHERICHIA COLI K-12 DNA sequence DA(B840):TTP(A900) DG(B841):DC(C873) DG(B842):DC(C872) DG(B843):DC(C871) DT(B844):DA(C870) DC(B845):DG(C869) DC(B846):DG(C868) DT(B847):DA(C867) DA(B848):DT(C866) DG(B849):DC(C865) DG(B850):DC(C864) DA(B851):DT(C863) DC(B852):DG(C862) DC(B853):DG(C861) DC(B854):DG(C860) chainA ( 9) ASP8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASP10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) CYS11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) PHE12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) PHE13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) VAL40 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER42 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR43 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG49 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER55 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA56 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASP103 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) GLU104 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS157 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) SER242 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (247) GLU246 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrkSvgvErtmaedihhwseceaiierlypelerrlakvkpdlliarqgvklkfddfqqtTqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yut_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 3 organism=ESCHERICHIA COLI K-12 DNA sequence DA(G840):TTP(F900) DG(G841):DC(H873) DG(G842):DC(H872) DG(G843):DC(H871) DT(G844):DA(H870) DC(G845):DG(H869) DC(G846):DG(H868) DT(G847):DA(H867) DA(G848):DT(H866) DG(G849):DC(H865) DG(G850):DC(H864) DA(G851):DT(H863) DC(G852):DG(H862) DC(G853):DG(H861) DC(G854):DG(H860) chainF ( 9) ASP8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASP10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) CYS11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) PHE12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) PHE13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) VAL40 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER42 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR43 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG49 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER55 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA56 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASP103 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) GLU104 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS157 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) SER242 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (247) GLU246 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrkSvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yuu_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 4 organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(C860):DC(B854) DG(C861):DC(B853) DG(C862):DC(B852) DT(C863):DA(B851) DC(C864):DG(B850) DC(C865):DG(B849) DT(C866):DA(B848) DA(C867):DT(B847) DG(C868):DC(B846) DG(C869):DC(B845) DA(C870):DT(B844) DC(C871):DG(B843) DC(C872):DG(B842) DC(C873):DG(B841) TTP(A900):DA(B840) chainA ( 9) ASP8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 11) ASP10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 12) CYS11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 13) PHE12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 14) PHE13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 41) VAL40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 43) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 44) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 50) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 56) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 57) ALA56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (104) ASP103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (105) GLU104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (158) LYS157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (247) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (286) ARG285 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yuv_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 5 organism=ESCHERICHIA COLI K-12 DNA sequence DA(B840):TTP(C901) DG(B841):DC(C873) DG(B842):DC(C872) DG(B843):DC(C871) DT(B844):DA(C870) DC(B845):DG(C869) DC(B846):DG(C868) DT(B847):DA(C867) DA(B848):DT(C866) DG(B849):DC(C865) DG(B850):DC(C864) DA(B851):DT(C863) DC(B852):DG(C862) DC(B853):DG(C861) DC(B854):DG(C860) chainA ( 9) ASP8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASP10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) CYS11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) PHE12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) VAL40 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER42 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR43 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG49 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER55 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA56 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASP103 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) GLU104 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS157 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) SER242 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (247) GLU246 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrkSvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yuw_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 6 organism=Escherichia coli K-12 DNA sequence DA(B840):TTP(A900) DG(B841):DC(C873) DG(B842):DC(C872) DG(B843):DC(C871) DT(B844):DA(C870) DC(B845):DG(C869) DC(B846):DG(C868) DT(B847):DA(C867) DA(B848):DT(C866) DG(B849):DC(C865) DG(B850):DC(C864) DA(B851):DT(C863) DC(B852):DG(C862) DC(B853):DG(C861) DC(B854):DG(C860) chainA ( 9) ASP8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASP10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) CYS11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) PHE12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) PHE13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) VAL40 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER42 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR43 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG49 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER55 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA56 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASP103 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) GLU104 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS157 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) SER242 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (247) GLU246 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrkSvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvKlkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yux_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 8 organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(G840):TTP(F900) DG(G841):DC(H873) DG(G842):DC(H872) DG(G843):DC(H871) DT(G844):DA(H870) DC(G845):DG(H869) DC(G846):DG(H868) DT(G847):DA(H867) DA(G848):DT(H866) DG(G849):DC(H865) DG(G850):DC(H864) DA(G851):DT(H863) DC(G852):DG(H862) DC(G853):DG(H861) DC(G854):DG(H860) chainF ( 9) ASP8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASP10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) CYS11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) PHE12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) PHE13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) VAL40 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER42 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR43 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG49 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER55 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA56 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASP103 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) GLU104 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS157 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) SER242 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (247) GLU246 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrkSvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yuy_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 9 organism=Escherichia coli K-12 DNA sequence DA(B840):TTP(C901) DG(B841):DC(C873) DG(B842):DC(C872) DG(B843):DC(C871) DT(B844):DA(C870) DC(B845):DG(C869) DC(B846):DG(C868) DT(B847):DA(C867) DA(B848):DT(C866) DG(B849):DC(C865) DG(B850):DC(C864) DA(B851):DT(C863) DC(B852):DG(C862) DC(B853):DG(C861) DC(B854):DG(C860) chainA ( 9) ASP8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASP10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) CYS11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) PHE12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) PHE13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) VAL40 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER42 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR43 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG49 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER55 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA56 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASP103 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) GLU104 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS157 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) GLU246 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqtTqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yuz_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 11 organism=Escherichia coli K-12 DNA sequence DG(C860):DC(B854) DG(C861):DC(B853) DG(C862):DC(B852) DT(C863):DA(B851) DC(C864):DG(B850) DC(C865):DG(B849) DT(C866):DA(B848) DA(C867):DT(B847) DG(C868):DC(B846) DG(C869):DC(B845) DA(C870):DT(B844) DC(C871):DG(B843) DC(C872):DG(B842) DC(C873):DG(B841) TTP(C901):DA(B840) chainA ( 9) ASP8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 11) ASP10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 12) CYS11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 13) PHE12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 14) PHE13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 41) VAL40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 ( 43) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 44) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 50) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 56) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 57) ALA56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (104) ASP103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (105) GLU104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (158) LYS157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (247) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (286) ARG285 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqtTqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yv0_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 12 organism=Escherichia coli K-12 DNA sequence DA(B840):TTP(C901) DG(B841):DC(C873) DG(B842):DC(C872) DG(B843):DC(C871) DT(B844):DA(C870) DC(B845):DG(C869) DC(B846):DG(C868) DT(B847):DA(C867) DA(B848):DT(C866) DG(B849):DC(C865) DG(B850):DC(C864) DA(B851):DT(C863) DC(B852):DG(C862) DC(B853):DG(C861) DC(B854):DG(C860) chainA ( 9) ASP8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ASP10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) CYS11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) PHE12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) PHE13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) VAL40 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER42 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR43 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG49 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER55 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA56 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ASP103 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) GLU104 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LYS157 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) SER242 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (247) GLU246 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrkSvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yv1_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 13 organism=Escherichia coli K-12 DNA sequence DA(G840):DT(H874) DG(G841):DC(H873) DG(G842):DC(H872) DG(G843):DC(H871) DT(G844):DA(H870) DC(G845):DG(H869) DC(G846):DG(H868) DT(G847):DA(H867) DA(G848):DT(H866) DG(G849):DC(H865) DG(G850):DC(H864) DA(G851):DT(H863) DC(G852):DG(H862) DC(G853):DG(H861) DC(G854):DG(H860) chainF ( 14) PHE13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) VAL40 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER42 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER55 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA56 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) SER242 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (247) GLU246 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcfFaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrSAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrkSvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqQttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yv2_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 14 organism=Escherichia coli K-12 DNA sequence DG(C860):DC(B854) DG(C861):DC(B853) DG(C862):DC(B852) DT(C863):DA(B851) DC(C864):DG(B850) DC(C865):DG(B849) DT(C866):DA(B848) DA(C867):DT(B847) DG(C868):DC(B846) DG(C869):DC(B845) DA(C870):DT(B844) DC(C871):DG(B843) DC(C872):DG(B842) DC(C873):DG(B841) DT(C874):DA(B840) chainA ( 14) PHE13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 41) VAL40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 43) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 56) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 57) ALA56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (247) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (286) ARG285 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcfFaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrSAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yv3_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 7 organism=Escherichia coli K-12 DNA sequence DG(H860):DC(G854) DG(H861):DC(G853) DG(H862):DC(G852) DT(H863):DA(G851) DC(H864):DG(G850) DC(H865):DG(G849) DT(H866):DA(G848) DA(H867):DT(G847) DG(H868):DC(G846) DG(H869):DC(G845) DA(H870):DT(G844) DC(H871):DG(G843) DC(H872):DG(G842) DC(H873):DG(G841) TTP(H900):DA(G840) chainF ( 9) ASP8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 11) ASP10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 12) CYS11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 13) PHE12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 14) PHE13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 41) VAL40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 ( 43) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 44) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 47) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 50) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 56) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 57) ALA56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (104) ASP103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (105) GLU104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (158) LYS157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (247) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (286) ARG285 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvKlkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yws_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF TREX1 IN COMPLEX WITH A Y STRUCTURED DNA organism=Mus musculus DNA sequence DT(C3):DA(C20) DG(C4):DC(C19) DG(C5):DC(C18) DC(C6):DG(C17) DC(C7):DG(C16) DC(C8):DG(C15) chainA (124) ARG128 2 4 7 0 0 0 prot.sequence tlphghmqtlifldleatglpssrpevtelcllavhrralentsisqghpppvprpprvvdklslciapgkacspgaseitglskaelevqgrqrfddnlaillraflqrqpqpcclvahNgdRydfpllqtelarlstpspldgtfcvdsiaalkaleqasspsgngsrksyslgsiytrlywqaptdshtaegdvltllsicqwkpqallqwvdeharpfstvkpmygt >5ywt_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF TREX1 IN COMPLEX WITH A DUPLEX DNA WITH 3' OVERHANG organism=Mus musculus DNA sequence DG(C1) DG(C2) DC(C3) DC(C4) DC(C5) DT(C6) DC(C7) DT(C8) DT(C9) chainA ( 20) LEU24 0 0 0 0 0 0 0 10 17 ( 21) PRO25 0 0 0 0 0 0 0 4 0 ( 74) SER78 0 0 0 0 0 0 0 0 1 ( 77) ALA81 0 0 0 0 0 0 0 0 1 ( 80) ILE84 0 0 0 0 0 0 0 0 8 (121) ASN125 0 0 0 0 0 0 5 3 0 (124) ARG128 0 0 0 0 0 16 2 0 0 (125) TYR129 0 0 0 0 0 0 0 6 0 (153) ALA157 0 0 0 0 7 0 0 0 0 (156) LYS160 0 0 0 0 2 0 0 0 0 (181) HIS195 0 0 0 0 0 0 0 0 1 (204) TRP218 0 0 0 0 1 0 0 0 0 prot.sequence tlphghmqtlifldleatgLPssrpevtelcllavhrralentsisqghpppvprpprvvdklslciapgkacSpgAseItglskaelevqgrqrfddnlaillraflqrqpqpcclvahNgdRYdfpllqtelarlstpspldgtfcvdsiAalKaleqksyslgsiytrlywqaptdsHtaegdvltllsicqwkpqallqWvdeharpfstvkpmygtp >5ywu_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF TREX1 IN COMPLEX WITH A INOSINE CONTAINED DSDNA organism=Mus musculus DNA sequence DT(C5):DI(C22) DG(C6):DC(C21) DG(C7):DC(C20) DC(C8):DG(C19) DC(C9):DG(C18) chainA ( 20) LEU24 8 0 0 0 0 ( 21) PRO25 16 0 0 0 0 ( 22) SER26 4 0 0 0 0 (121) ASN125 5 7 0 0 0 (124) ARG128 0 7 1 0 0 (125) TYR129 9 0 0 0 0 prot.sequence tlphghmqtlifldleatgLPSsrpevtelcllavhrralentsisqghpppvprpprvvdklslciapgkacspgaseitglskaelevqgrqrfddnlaillraflqrqpqpcclvahNgdRYdfpllqtelarlstpspldgtfcvdsiaalkaleqassprksyslgsiytrlywqaptdshtaegdvltllsicqwkpqallqwvdeharpfstvkpmyg >5yx2_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3A-DNMT3L IN COMPLEX WITH DNA CONTAINING TWO CPG SITES organism=HOMO SAPIENS DNA sequence DC(F423):DG(E446) DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DG(F428):DC(E441) DT(F429):DA(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DA(F440):DT(E429) DC(F441):DG(E428) DG(F442):PYO(E427) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainA ( 88) ILE715 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) VAL716 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) PRO718 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) THR834 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG836 0 0 0 0 10 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER837 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) ASN838 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) LEU883 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVNParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTtRSNsikqgkdqhfpvfmnekedilwctemervfgfpvhytdvsnmsrLarqrllgrswsvpvirhlfaplkeyfacv >5yx2_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3A-DNMT3L IN COMPLEX WITH DNA CONTAINING TWO CPG SITES organism=HOMO SAPIENS DNA sequence DC(E423):DG(F446) DA(E424):DT(F445) DT(E425):DA(F444) DG(E426):DC(F443) PYO(E427):DG(F442) DG(E428):DC(F441) DT(E429):DA(F440) DT(E430):DA(F439) DC(E431):DG(F438) DT(E432):DA(F437) DA(E433):DT(F436) DA(E434):DT(F435) DT(E435):DA(F434) DT(E436):DA(F433) DA(E437):DT(F432) DG(E438):DC(F431) DA(E439):DT(F430) DA(E440):DT(F429) DC(E441):DG(F428) DC(E443):DG(F426) DA(E444):DT(F425) DT(E445):DA(F424) DG(E446):DC(F423) chainA ( 88) ILE715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 ( 89) VAL716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 ( 91) PRO718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (207) THR834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (209) ARG836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 10 0 0 0 0 (210) SER837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (211) ASN838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (256) LEU883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 chainD ( 83) CYS710 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ILE715 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) VAL716 0 0 0 12 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ASN717 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) PRO718 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) GLU756 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ASN757 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) VAL758 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ARG790 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ARG792 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) THR834 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) THR835 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG836 0 0 0 0 0 9 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER837 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) ASN838 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) LEU883 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVNParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTtRSNsikqgkdqhfpvfmnekedilwctemervfgfpvhytdvsnmsrLarqrllgrswsvpvirhlfaplkeyfacv/aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVNParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTTRSNsikqgkdqhfpvfmnekedilwctemervfgfpvhytdvsnmsrLarqrllgrswsvpvirhlfaplkeyfacv >5yyd_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - TERNARY COMPLEX 15 organism=ESCHERICHIA COLI DNA sequence DG(C860):DC(B854) DG(C861):DC(B853) DG(C862):DC(B852) DT(C863):DA(B851) DC(C864):DG(B850) DC(C865):DG(B849) DT(C866):DA(B848) DA(C867):DT(B847) DG(C868):DC(B846) DG(C869):DC(B845) DA(C870):DT(B844) DC(C871):DG(B843) DC(C872):DG(B842) DC(C873):DG(B841) chainA (243) SER242 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (247) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (286) ARG285 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgvistanyparkfgvrsamptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrkSvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvKlkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yye_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - TERNARY COMPLEX 16 organism=? DNA sequence DG(C860):DC(B854) DG(C861):DC(B853) DG(C862):DC(B852) DT(C863):DA(B851) DC(C864):DG(B850) DC(C865):DG(B849) DT(C866):DA(B848) DA(C867):DT(B847) DG(C868):DC(B846) DG(C869):DC(B845) DA(C870):DT(B844) DC(C871):DG(B843) DC(C872):DG(B842) DC(C873):DG(B841) chainA (247) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (286) ARG285 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (300) THR299 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgvistanyparkfgvrsamptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqtTqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5yzy_C:DNA-binding_pseudobarrel_domain; title=ATVAL1 B3 DOMAIN IN COMPLEX WITH 13BP-DNA organism=Arabidopsis thaliana DNA sequence DA(B2):DT(A301) DT(B3):DA(A300) DC(B4):DG(A299) DC(B5):DG(A298) DA(B6):DT(A297) DT(B7):DA(A296) DG(B8):DC(A295) DC(B9):DG(A294) DA(B10):DT(A293) DG(B11):DC(A292) DA(B12):DT(A291) DA(B13):DT(A290) chainC ( 16) SER302 0 0 0 0 0 5 0 0 0 0 0 0 ( 21) ILE307 0 0 0 0 0 0 0 0 1 0 0 0 ( 23) ARG309 0 0 0 0 0 0 4 11 7 0 0 0 ( 25) VAL311 0 0 0 0 0 1 0 0 0 0 0 0 ( 63) TRP349 0 0 0 0 0 0 18 4 0 0 0 0 ( 65) ASN351 0 0 0 6 8 6 0 0 0 0 0 0 ( 66) ASN352 0 0 1 2 3 0 0 0 0 0 0 0 ( 70) MET356 0 0 0 2 4 6 0 0 0 0 0 0 prot.sequence lnlnivplfektlsaSdagrIgRlVlpkacaeayfppisqsegiplkiqdvrgrewtfqfryWpNNnsrMyvlegvtpciqsmmlqagdtvtfsrvdpggklimgsrkaan >5yzz_C:DNA-binding_pseudobarrel_domain; title=ATVAL1 B3 DOMAIN IN COMPLEX WITH 13BP-DNA organism=Arabidopsis thaliana DNA sequence DT(A2):DA(B13) DT(A3):DA(B12) DC(A4):DG(B11) DT(A5):DA(B10) DG(A6):DC(B9) DC(A7):DG(B8) DA(A8):DT(B7) DT(A9):DA(B6) DG(A10):DC(B5) DG(A11):DC(B4) DA(A12):DT(B3) DT(A13):DA(B2) chainC ( 16) SER302 0 0 0 0 0 0 4 0 0 0 0 0 ( 21) ILE307 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ARG309 0 0 0 7 10 4 0 0 0 0 0 0 ( 25) VAL311 0 0 0 0 0 0 1 0 0 0 0 0 ( 63) TRP349 0 0 0 0 4 19 0 0 0 0 0 0 ( 65) ASN351 0 0 0 0 0 0 3 7 9 0 0 0 ( 66) ASN352 0 0 0 0 0 0 0 3 2 2 0 0 ( 70) MET356 0 0 0 0 0 0 6 7 1 0 0 0 prot.sequence lnlnivplfektlsaSdagrIgRlVlpkacaeayfppisqsegiplkiqdvrgrewtfqfryWpNNnsrMyvlegvtpciqsmmlqagdtvtfsrvdpggklimgsrkaan >5z00_K:DNA-binding_pseudobarrel_domain; title=ATVAL1 B3 DOMAIN IN COMPLEX WITH 15BP-DNA organism=Arabidopsis thaliana DNA sequence DA(I289):DT(J14) DT(I290):DA(J13) DT(I291):DA(J12) DC(I292):DG(J11) DT(I293):DA(J10) DG(I294):DC(J9) DC(I295):DG(J8) DA(I296):DT(J7) DT(I297):DA(J6) DG(I298):DC(J5) DG(I299):DC(J4) DA(I300):DT(J3) DT(I301):DA(J2) DT(I302):DA(J1) chainK ( 16) SER302 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 21) ILE307 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 23) ARG309 0 0 0 0 0 5 2 0 0 0 0 0 0 0 ( 25) VAL311 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 63) TRP349 0 0 0 0 0 0 21 4 0 0 0 0 0 0 ( 65) ASN351 0 0 0 0 0 0 0 6 5 5 0 0 0 0 ( 66) ASN352 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 70) MET356 0 0 0 0 0 0 0 5 6 3 0 0 0 0 prot.sequence lnlnivplfektlsaSdagrIgRlVlpkacaeayfppisqsegiplkiqdvrgrewtfqfryWpNNnsrMyvlegvtpciqsmmlqagdtvtfsrvdpggklimgsrkaan >5z23_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING A CHIMERIC HISTONE H3/CENP-A CATD organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J265):DA(I29) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 63) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhakrvtimpkdiqlarrirger/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/akaktrssraglqfpvgrvhrllrkgnyseRvgagapvymaavleymtaeilelagnaardnkktriiprhlqlairndeemnkllgrvtiaqggvlpniqavllp/sRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/phRyrpgtvalreirryqkstellirkLpfqrlvreicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyservgagapvymaavleymtaeilelagnaardnkktRiiprhlqlairndeemnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiQtavrlllpgelakhavsegtkavtkytsa >5z23_C:Histone-fold; title=CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING A CHIMERIC HISTONE H3/CENP-A CATD organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I29):DT(J265) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence akaktrssraglqfpvgrvhrllrkgnyseRvgagapvymaavleymtaeilelagnaardnkktriiprhlqlairndeemnkllgrvtiaqggvlpniqavllp >5z2t_C:Homeodomain-like; title=CRYSTAL STRUCTURE OF DNA-BOUND DUX4-HD2 organism=Homo sapiens DNA sequence DC(E2):DG(F26) DT(E3):DA(F25) DA(E4):DT(F24) DA(E5):DT(F23) DT(E6):DA(F22) DC(E7):DG(F21) DT(E8):DA(F20) DA(E9):DT(F19) DA(E10):DT(F18) DT(E11):DA(F17) DC(E12):DG(F16) DT(E13):DA(F15) DT(E14):DA(F14) chainC ( 43) ILE51 0 0 0 0 0 0 0 0 2 3 0 0 0 ( 46) GLN54 0 0 0 0 0 0 0 0 0 0 1 2 2 ( 47) ASN55 0 0 0 0 0 0 0 3 10 0 0 0 0 ( 51) ARG59 0 0 0 0 0 0 17 8 4 0 0 0 0 prot.sequence rtavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrraRhp >5z2t_CD:Homeodomain-like; title=CRYSTAL STRUCTURE OF DNA-BOUND DUX4-HD2 organism=Homo sapiens DNA sequence DC(E2):DG(F26) DT(E3):DA(F25) DA(E4):DT(F24) DA(E5):DT(F23) DT(E6):DA(F22) DC(E7):DG(F21) DT(E8):DA(F20) DA(E9):DT(F19) DA(E10):DT(F18) DT(E11):DA(F17) DC(E12):DG(F16) DT(E13):DA(F15) DT(E14):DA(F14) chainC ( 43) ILE51 0 0 0 0 0 0 0 0 2 3 0 0 0 ( 46) GLN54 0 0 0 0 0 0 0 0 0 0 1 2 2 ( 47) ASN55 0 0 0 0 0 0 0 3 10 0 0 0 0 ( 51) ARG59 0 0 0 0 0 0 17 8 4 0 0 0 0 chainD ( 43) ILE51 0 0 0 2 4 0 0 0 0 0 0 0 0 ( 46) GLN54 0 0 0 0 2 1 1 1 0 0 0 0 0 ( 47) ASN55 0 0 2 11 1 0 0 0 0 0 0 0 0 ( 51) ARG59 0 20 10 6 0 0 0 0 0 0 0 0 0 prot.sequence rtavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrraRhp/rtavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrraRhpg >5z30_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING A CANCER- ASSOCIATED HISTONE H2A.Z R80C MUTANT organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 5) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kavsRsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkcitprhlqlairgdeeldslikatiagggviphihkslig/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kkphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/gkaktkavsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkcitprhlqlairgdeeldslikatiagggviphihkslig/Rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >5z30_E:Histone-fold; title=THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING A CANCER- ASSOCIATED HISTONE H2A.Z R80C MUTANT organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger >5z3l_O:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF SNF2-NUCLEOSOME COMPLEX IN APO STATE organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(J2):DG(I146) DA(J3):DT(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainO (153) GLU874 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) ASN1049 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) ILE1052 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) LYS1138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) TRP1185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lldqtkdtrithllrqtnafldyynvahrikedikkqpsilvggtlkdyqikglqwmvslfnnhlngilademglgktiqtislltylyemknirgpylvivplstlsnwssefakwaptlrtisfkgspnerkakqakiragefdvvlttfEyiikerallskvkwvhmiideghrmknaqsklsltlnthyhadyrliltgtplqnnlpelwallnfvlpkifnsvksfdewfntpfdkielseeetllvirrlhkvlrpfllrrlkkdvekelpdkvekvvkckmsalqqimyqqmlkyrrlgfNnqImqlkkicnhpfvfeevedqinptretnddiwrvagkfelldrilpklkatghrvliffqmtqimdimedflryinikylrldghtKsdersellrlfnapdseylcfilstragglglnlqtadtviifdtdWnphqdlqaqdrahrigqknevrilrlittnsveevileraykkldidgkviqagkfdnkstseeqeallrslldaeeerrkkreelkdseineilarndeemavltrmdedrskkeeksrllekkreesesaavyng >5z3n_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS HOST-GUEST COMPLEX WITH THE UNNATURAL BASE 5FC PAIR WITH DA organism=Thermus aquaticus DNA sequence DA(B102):DC(C216) DC(B103):DT(C215) DC(B104):DG(C214) DA(B105):DG(C213) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DG(B110):DC(C207) DC(B111):DG(C206) chainA (247) LYS540 0 0 0 0 0 0 5 5 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 4 (287) ASN580 0 0 0 0 0 0 0 0 1 0 (290) ASN583 0 0 0 0 0 0 0 1 11 2 (461) GLN754 0 0 0 0 0 0 0 0 0 1 (491) HIS784 0 0 0 0 0 0 0 0 0 1 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >5z3o_D:Histone-fold; title=STRUCTURE OF SNF2-NUCLEOSOME COMPLEX IN ADP STATE organism=? DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DT(I138):DT(J11) DA(I139):DA(J10) DC(I140):DT(J9) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DT(I145):DA(J3) DG(I146):DC(J2) DA(I147):DT(J1) chainD ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5z3v_E:Histone-fold; title=STRUCTURE OF SNF2-NUCLEOSOME COMPLEX AT SHL-2 IN ADP BEFX STATE organism=? DNA sequence DT(J1):DA(I147) DC(J2):DG(I146) DA(J3):DT(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) chainE ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >5z6w_A: title=CRYSTAL STRUCTURE OF PAFAN1 BOUND TO 2NT 5'FLAP DNA WITH GAP WITH MANGANESE organism=? DNA sequence DG(H1):DC(C22) DT(H2):DA(C21) DT(H3):DA(C20) DG(H4):DC(C19) DG(H5):DC(C18) DG(H6):DC(C17) DA(H7):DT(C16) DT(H8):DA(C15) DT(H9):DA(C14) DG(H10):DC(C13) chainA ( 8) TYR21 0 0 0 0 0 0 0 0 0 5 (178) VAL191 0 0 0 0 0 0 0 0 0 4 (179) LEU192 0 0 0 0 0 0 0 0 0 16 (182) LEU195 0 0 0 0 0 0 0 0 0 5 (184) ILE197 0 0 0 0 0 0 0 0 0 5 (185) TYR198 0 0 0 0 0 0 0 0 0 1 prot.sequence palpepfYylhnfravlawigeryadllddqerafiaafaelpeasqallvrmvmrkgtlfregklayaeigdtraavqpllalgwvdaqptlelaqlfgllkkdelsqlfrdhlgranlrkdallerlqplfpearrlaewqadfaepvyelrcmalcdrlrlmyfgnlwqdwsefVLadLgIYryesvefsadsrgfrlradvdaylhlfdcrqrfdlgepleellaglpgepyanpwlegrrvkllfqfaqhcekqrdfdlaqrlyrqsshpgarlrairslergerfaeahalareascapesdaerqglarllprlqgklglprqaraaapeidrldlclafpsepcsvewavrehleepgcavhyvenglinslfgllcweaifaaipgaffhpfhsapadlhsadfrqrraalfeaclgrledgsyrdaircryrdkfglqspfvywellgeelleqaldclpaahlrawferlledipgnraglpdliqfwpaqrryrmvevkgpgdrlqdnqlrwlqfcrerempvavcyvrwhvdd >5z6z_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF HUMAN DUX4 HOMEODOMAINS BOUND TO DNA organism=Homo sapiens DNA sequence DC(D1):DG(E19) DC(D2):DG(E18) DA(D3):DT(E17) DC(D4):DG(E16) DT(D5):DA(E15) DA(D6):DT(E14) DA(D7):DT(E13) DC(D8):DG(E12) DC(D9):DG(E11) DT(D10):DA(E10) DA(D11):DT(E9) DA(D12):DT(E8) DT(D13):DA(E7) DC(D14):DG(E6) DA(D15):DT(E5) DC(D16):DG(E4) DA(D17):DT(E3) DC(D18):DG(E2) DC(D19):DG(E1) chainA ( 2) ARG20 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG23 0 0 0 11 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ILE65 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) GLN68 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 51) ASN69 0 0 0 0 0 7 10 4 0 0 0 0 0 0 0 0 0 0 0 ( 54) SER72 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 68) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 ( 71) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 2 0 0 0 (113) ILE140 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (116) GLN143 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 (117) ASN144 0 0 0 0 0 0 0 0 0 0 0 2 11 5 0 0 0 0 0 (121) ARG148 0 0 0 0 0 0 0 0 0 0 0 0 5 9 16 0 0 0 0 prot.sequence gRrrRlvwtpsqsealracfernpypgiatrerlaqaigipeprvqIwfQNeRSrqlrqhrrespegRrkRtavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrraRh >5z7d_C:HIN-2000_domain-like; title=P204HINAB-DSDNA COMPLEX STRUCTURE organism=Mus musculus DNA sequence DG(L1):DC(K16) DC(L2):DG(K15) DT(L3):DA(K14) DC(L4):DG(K13) DT(L5):DA(K12) DC(L6):DG(K11) DT(L7):DA(K10) DT(L8):DA(K9) DT(L9):DA(K8) DC(L10):DG(K7) DT(L11):DA(K6) DG(L12):DC(K5) DT(L14):DT(K4) DG(L15):DC(K2) chainC (100) ARG320 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (298) ASN518 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (302) GLN522 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence gavlhsepltvmvltatdpfeyespehevknmlhatvatvsqyfhvkvfninlkekftkknfiiisnyfeskgileinetssvleaapdqmievpnsiiRnanaspkicdiqkgtsgavfygvftlhkktvnrkntiyeikdgsgsievvgsgkwhninckegdklhlfcfhlktidrqpklvcgehsfikiskrgnvpkepakeedhhhgpkqvmvlkvtepftydlkedkrmfhatvateteffrvkvfdtalkskfiprniiaisdyfgcngfleiyrascvsdvnvnptmvisNtlrQranatpkisylfsqargtfvsgeylvnkkternkfiyygigddtgkmevvvygrltnvrcepgsklrlvcfeltstedgwqlrsvrhsymqvin >5z7i_AC:post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like; title=CAULOBACTER CRESCENTUS GCRA DNA-BINDING DOMAIN(DBD)IN COMPLEX WITH UNMETHYLATED DSDNA organism=Caulobacter crescentus (strain NA1000 / CB15N) / Caulobacter crescentus (strain NA1000 / CB15N) / Caulobacter crescentus (strain NA1000 / CB15N) / Caulobacter crescentus (strain NA1000 / CB15N) DNA sequence DG(E2):DC(D11) DC(E3):DG(D10) DG(E4):DC(D9) DA(E5):DT(D8) DA(E6):DT(D7) DT(E7):DA(D6) DC(E8):DG(D5) DA(E9):DT(D4) DG(E10):DC(D3) DG(E11):DC(D2) chainA ( 33) ARG33 0 0 0 0 0 2 11 13 0 0 ( 34) ASN34 0 0 0 6 9 2 0 0 0 0 ( 37) ILE37 0 0 0 0 1 4 2 0 0 0 ( 41) HIS41 0 0 0 0 3 0 0 0 0 0 ( 42) ARG42 0 9 5 0 0 0 0 0 0 0 chainC ( 26) LYS26 0 0 0 0 0 0 10 11 0 0 prot.sequence mswtdervstlkklwldglsasqiakqlggvtRNavIgkvHRlgl/mswtdervstlkklwldglsasqiaKqlggvtrnavigkvhrlgl >5z7i_C:post-AAA+_oligomerization_domain-like; title=CAULOBACTER CRESCENTUS GCRA DNA-BINDING DOMAIN(DBD)IN COMPLEX WITH UNMETHYLATED DSDNA organism=Caulobacter crescentus (strain NA1000 / CB15N) / Caulobacter crescentus (strain NA1000 / CB15N) DNA sequence DG(E2):DC(D11) DC(E3):DG(D10) DG(E4):DC(D9) DA(E5):DT(D8) DA(E6):DT(D7) DT(E7):DA(D6) DC(E8):DG(D5) DA(E9):DT(D4) DG(E10):DC(D3) DG(E11):DC(D2) chainC ( 26) LYS26 0 0 0 0 0 0 10 11 0 0 prot.sequence mswtdervstlkklwldglsasqiaKqlggvtrnavigkvhrlgl >5zad_A:Type_II_DNA_topoisomerase; title=HUMAN TOPOISOMERASE II BETA IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DA(C1):DT(F20) DG(C2):DC(F19) DC(C3):DG(F18) DC(C4):DG(F17) DG(C5):DC(F16) DA(C6):DT(F15) DG(C7):DC(F14) DC(C8):DG(F13) chainA ( 54) LYS505 0 0 0 0 0 0 5 4 (323) ALA779 0 0 0 0 0 0 1 0 (416) ILE872 0 0 0 20 20 0 0 0 (421) ALA877 0 0 0 1 0 0 0 0 prot.sequence kgipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplrgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitpivkasknkqelsfysipefdewkkhiwkikyykglgtstakeakeyfadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlhglpeqflygtatkhltyndfinkelilfsnsdnersipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeqAlmmtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspryiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaegIgtgwAcklpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngtdktpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqekaaeedegpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >5zbx_A:Histone-fold; title=THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING HISTONE H3.1 CATD(V76Q, K77D) organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreicqdftdfnwqaqallalqeaaeaflvhlfedaylltlhakrvtimpkdiqlarrirge >5zbx_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING HISTONE H3.1 CATD(V76Q, K77D) organism=HOMO SAPIENS DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 6) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 18) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreicqdftdfnwqaqallalqeaaeaflvhlfedaylltlhakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/SrkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/vkkphRyrpgtvalreirryqkstellirkLpfqrlvreicqdftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhakrvtimpkdiqlarrirge/hrkvlrdniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhRllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/Rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >5zcw_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=STRUCTURE OF THE METHANOSARCINA MAZEI CLASS II CPD-PHOTOLYASE IN COMPLEX WITH INTACT, PHOSPHODIESTER LINKED, CPD-LESION organism=Methanosarcina mazei DNA sequence DT(F1):DA(E13) DG(F2):DC(E12) DC(F3):DG(E11) DG(F4):DC(E10) DC(F5):DG(E9) DG(F6):DC(E8) DA(F7):DC(E6) DA(F8):DG(E5) chainB (396) ARG429 0 0 0 0 0 0 1 0 (398) TRP431 0 0 0 0 0 16 5 0 (408) ARG441 0 0 0 0 0 2 0 0 (417) ARG450 1 6 8 14 0 0 0 0 prot.sequence mnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaahtfrpklyallpefleefpelepnsvtpekdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >5zd4_AB:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 IN COMPLEX WITH DOUBLE- STRANDED DNA organism=ESCHERICHIA COLI O157:H7, ARABIDOPSIS THALIANA DNA sequence DT(F-3):DA(E10) DT(F-2):DA(E9) DC(F-1):DG(E8) DA(F0):DT(E7) DC(F1):DG(E6) DA(F2):DT(E5) DC(F3):DG(E4) DG(F4):DC(E3) DT(F5):DA(E2) DG(F6):DC(E1) DT(F7):DA(E0) DG(F8):DC(E-1) DA(F9):DT(E-2) DA(F10):DT(E-3) chainA (381) ASN33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (385) GLU37 0 0 0 0 10 5 1 0 0 0 0 0 0 0 (388) ARG40 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (389) ARG41 0 0 0 0 0 0 7 9 0 0 0 0 0 0 chainB (380) ASN33 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (384) GLU37 0 0 0 0 0 0 0 0 4 9 1 0 0 0 (387) ARG40 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (388) ARG41 0 0 0 0 0 0 13 7 0 0 0 0 0 0 prot.sequence kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrrErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/ieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrrErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >5zd4_C:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 IN COMPLEX WITH DOUBLE- STRANDED DNA organism=ESCHERICHIA COLI O157:H7, ARABIDOPSIS THALIANA DNA sequence DT(H-3):DA(G10) DT(H-2):DA(G9) DC(H-1):DG(G8) DA(H0):DT(G7) DC(H1):DG(G6) DA(H2):DT(G5) DC(H3):DG(G4) DG(H4):DC(G3) DT(H5):DA(G2) DG(H6):DC(G1) DT(H7):DA(G0) DG(H8):DC(G-1) DA(H9):DT(G-2) DA(H10):DT(G-3) chainC (371) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 2 3 (377) GLU29 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (381) ASN33 0 0 0 0 0 0 0 0 1 0 0 1 0 0 (384) ARG36 0 0 0 0 0 0 0 0 0 0 0 6 0 0 (385) GLU37 0 0 0 0 0 0 0 1 6 10 2 0 0 0 (388) ARG40 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (389) ARG41 0 0 0 0 0 0 12 8 0 0 0 0 0 0 prot.sequence kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >5zd4_CD:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 IN COMPLEX WITH DOUBLE- STRANDED DNA organism=ESCHERICHIA COLI O157:H7, ARABIDOPSIS THALIANA DNA sequence DT(G-3):DA(H10) DT(G-2):DA(H9) DC(G-1):DG(H8) DA(G0):DT(H7) DC(G1):DG(H6) DA(G2):DT(H5) DC(G3):DG(H4) DG(G4):DC(H3) DT(G5):DA(H2) DG(G6):DC(H1) DT(G7):DA(H0) DG(G8):DC(H-1) DA(G9):DT(H-2) DA(G10):DT(H-3) chainC (371) ARG23 3 2 0 0 0 0 0 0 0 0 0 0 0 0 (377) GLU29 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (381) ASN33 0 0 1 0 0 1 0 0 0 0 0 0 0 0 (384) ARG36 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (385) GLU37 0 0 0 2 10 6 1 0 0 0 0 0 0 0 (388) ARG40 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (389) ARG41 0 0 0 0 0 0 8 12 0 0 0 0 0 0 chainD (346) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 1 3 (352) GLU29 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (356) ASN33 0 0 0 0 0 0 0 0 1 0 0 1 0 0 (359) ARG36 0 0 0 0 0 0 0 0 0 0 0 7 0 0 (360) GLU37 0 0 0 0 0 0 0 1 7 8 2 0 0 0 (363) ARG40 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (364) ARG41 0 0 0 0 0 0 10 8 0 0 0 0 0 0 prot.sequence kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/viwingdkgynglaevgkkfvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >5zdz_C: title=HAIRPIN FORMING COMPLEX, RAG1/2-NICKED 12RSS/23RSS COMPLEX IN CA2+ organism=? DNA sequence DG(G3):DC(M55) DG(G4):DC(M54) DT(G5):DA(M53) DT(G6):DA(M52) DT(G7):DA(M51) DT(G8):DA(M50) DT(G9):DA(M49) DG(G10):DC(M48) DT(G11):DA(M47) DC(G12):DG(M46) DT(G13):DA(M45) DG(G14):DC(M44) DG(G15):DC(M43) DC(G16):DG(M42) DT(G17):DA(M41) DT(G18):DA(M40) DC(G19):DG(M39) DA(G20):DT(M38) DC(G21):DG(M37) DA(G22):DT(M36) DC(G23):DG(M35) DT(G24):DA(M34) DT(G25):DA(M33) DG(G26):DC(M32) DA(G27):DT(M31) DT(G28):DA(M30) DT(G29):DA(M29) DT(G30):DA(M28) DG(G31):DC(M27) DC(G32):DG(M26) DA(G33):DT(M25) DT(G34):DA(M24) DC(G35):DG(M23) DA(G36):DT(M22) DC(G37):DG(M21) DT(G38):DA(M20) DG(G39):DC(M19) DT(G40):DA(M18) chainC ( 59) ASN443 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (466) ASN850 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (468) ASN852 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 (471) ARG855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (575) GLU959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (579) SER963 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (582) LYS966 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 prot.sequence hinkggrprqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmNgNfaRklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasEgneSgnKlfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahn >5ze0_CN:Galactose_oxidase,_central_domain; title=HAIRPIN FORMING COMPLEX, RAG1/2-NICKED(WITH DIDEOXY) 12RSS/23RSS COMPLEX IN MG2+ organism=MUS MUSCULUS DNA sequence DG(G3):DC(M55) DG(G4):DC(M54) DT(G5):DA(M53) DT(G6):DA(M52) DT(G7):DA(M51) DT(G8):DA(M50) DT(G9):DA(M49) DG(G10):DC(M48) DT(G11):DA(M47) DC(G12):DG(M46) DT(G13):DA(M45) DG(G14):DC(M44) DG(G15):DC(M43) DC(G16):DG(M42) DT(G17):DA(M41) DT(G18):DA(M40) DC(G19):DG(M39) DA(G20):DT(M38) DC(G21):DG(M37) DA(G22):DT(M36) DC(G23):DG(M35) DT(G24):DA(M34) DT(G25):DA(M33) DG(G26):DC(M32) DA(G27):DT(M31) DT(G28):DA(M30) DT(G29):DA(M29) DT(G30):DA(M28) DG(G31):DC(M27) DC(G32):DG(M26) DA(G33):DT(M25) DT(G34):DA(M24) DC(G35):DG(M23) DA(G36):DT(M22) DC(G37):DG(M21) DT(G38):DA(M20) DG(G39):DC(M19) DT(G40):DA(M18) chainC ( 59) ASN443 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (466) ASN850 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (468) ASN852 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 8 (471) ARG855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 (575) GLU959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (579) SER963 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (582) LYS966 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 chainN ( 7) TYR16 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) PHE38 0 0 0 0 0 0 0 0 0 19 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER42 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PHE102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) PHE103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ILE122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ALA126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hinkggrprqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmNgNfaRklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasEgneSgnKlfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahn/rgkmssYaffvqtcreehkkkhpdasvnFsefSkkcserwkakekgkfedmakadkaryeremkrppsaFFlfcseyrpkikgeIgdvAkklgemwnntddkqpyekkaaklkekyek >5zen_A:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF HUMAN TOPOISOMERASE II BETA IN COMPLEX WITH DNA: A NEW QUATERNARY CONFORMATION SHOWING OPENING OF THE PROTEIN-LINKED DNA-GATE organism=Homo sapiens DNA sequence DG(C13):DC(B8) DC(C14):DG(B7) DT(C15):DA(B6) DC(C16):DG(B5) DG(C17):DC(B4) DG(C18):DC(B3) DC(C19):DG(B2) DT(C20):DA(B1) chainA ( 54) LYS505 5 5 0 0 0 0 0 0 (309) ALA779 0 2 0 0 0 0 0 0 (402) ILE872 0 0 0 17 20 0 0 0 (407) ALA877 0 0 0 0 1 0 0 0 prot.sequence kgipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplrgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitpivkalsfysipefdewkkikyykglgtstakeakeyfadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlhglpeqflykhltyndfinkelilfsnsdnersipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeqAlmmtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspryiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaegIgtgwAcklpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngtdktpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqegpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >5zfw_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF HUMAN DUX4 HOMEODOMAINS BOUND TO A11G DNA MUTANT organism=Homo sapiens DNA sequence DC(D1):DG(E19) DC(D2):DG(E18) DA(D3):DT(E17) DC(D4):DG(E16) DT(D5):DA(E15) DA(D6):DT(E14) DA(D7):DT(E13) DC(D8):DG(E12) DC(D9):DG(E11) DT(D10):DA(E10) DG(D11):DC(E9) DA(D12):DT(E8) DT(D13):DA(E7) DC(D14):DG(E6) DA(D15):DT(E5) DC(D16):DG(E4) DA(D17):DT(E3) DC(D18):DG(E2) DC(D19):DG(E1) chainA ( 2) ARG20 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG23 0 0 0 13 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ILE65 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 50) GLN68 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 51) ASN69 0 0 0 0 0 6 10 4 0 0 0 0 0 0 0 0 0 0 0 ( 54) SER72 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 68) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 ( 71) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 4 0 0 0 (113) ILE140 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (116) GLN143 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 (117) ASN144 0 0 0 0 0 0 0 0 0 0 0 2 10 7 0 0 0 0 0 (121) ARG148 0 0 0 0 0 0 0 0 0 0 0 0 6 14 18 0 0 0 0 prot.sequence gRrrRlvwtpsqsealracfernpypgiatrerlaqaigipeprvqIwfQNerSrqlrqhrrespegRrkRtavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrraRh >5zfy_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF HUMAN DUX4 HOMEODOMAINS BOUND TO A12C DNA MUTANT organism=Homo sapiens DNA sequence DC(D1):DG(E19) DC(D2):DG(E18) DA(D3):DT(E17) DC(D4):DG(E16) DT(D5):DA(E15) DA(D6):DT(E14) DA(D7):DT(E13) DC(D8):DG(E12) DC(D9):DG(E11) DT(D10):DA(E10) DA(D11):DT(E9) DC(D12):DG(E8) DT(D13):DA(E7) DC(D14):DG(E6) DA(D15):DT(E5) DC(D16):DG(E4) DA(D17):DT(E3) DC(D18):DG(E2) DC(D19):DG(E1) chainA ( 3) ARG20 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG23 0 0 0 11 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ILE65 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN68 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 52) ASN69 0 0 0 0 0 6 11 4 0 0 0 0 0 0 0 0 0 0 0 ( 55) SER72 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 69) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 ( 72) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 4 0 0 0 (114) ILE140 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (117) GLN143 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 (118) ASN144 0 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 (122) ARG148 0 0 0 0 0 0 0 0 0 0 0 0 6 13 20 0 0 0 0 prot.sequence rgRrrRlvwtpsqsealracfernpypgiatrerlaqaigipeprvqIwfQNeRSrqlrqhrrespegRrkRtavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrraRh >5zfz_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF HUMAN DUX4 HOMEODOMAINS BOUND TO A12T DNA MUTANT organism=Homo sapiens DNA sequence DC(D1):DG(E19) DC(D2):DG(E18) DA(D3):DT(E17) DC(D4):DG(E16) DT(D5):DA(E15) DA(D6):DT(E14) DA(D7):DT(E13) DC(D8):DG(E12) DC(D9):DG(E11) DT(D10):DA(E10) DA(D11):DT(E9) DT(D12):DA(E8) DT(D13):DA(E7) DC(D14):DG(E6) DA(D15):DT(E5) DC(D16):DG(E4) DA(D17):DT(E3) DC(D18):DG(E2) DC(D19):DG(E1) chainA ( 2) ARG20 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG23 0 0 0 11 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ILE65 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 50) GLN68 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 51) ASN69 0 0 0 0 0 6 10 3 0 0 0 0 0 0 0 0 0 0 0 ( 54) SER72 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 68) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 ( 71) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 4 0 0 0 (113) ILE140 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (116) GLN143 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 (117) ASN144 0 0 0 0 0 0 0 0 0 0 0 1 10 5 0 0 0 0 0 (120) ALA147 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (121) ARG148 0 0 0 0 0 0 0 0 0 0 0 0 3 13 21 0 0 0 0 prot.sequence gRrrRlvwtpsqsealracfernpypgiatrerlaqaigipeprvqIwfQNeRSrqlrqhrrespegRrkRtavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrrARh >5zg9_A:ssDNA-binding_transcriptional_regulator_domain; title=CRYSTAL STRUCTURE OF MOSUB1-SSDNA COMPLEX IN PHOSPHATE BUFFER organism=MAGNAPORTHE ORYZAE (STRAIN P131) / MAGNAPORTHE ORYZAE (STRAIN P131) DNA sequence DT(C1) DT(C2) DT(C3) DT(C4) DT(C5) DT(C6) DT(C7) DT(C8) DT(C9) DT(C10) DT(C11) DT(C12) chainA ( 27) SER60 0 0 0 0 0 0 0 0 0 2 6 0 ( 29) PHE62 0 0 0 0 0 0 0 0 0 0 38 2 ( 30) LYS63 0 0 0 0 0 0 0 0 0 0 0 3 ( 32) MET65 0 0 0 0 0 0 0 0 0 0 0 14 ( 34) PHE67 0 0 0 0 0 0 0 0 0 0 3 9 ( 36) ASN69 0 0 0 0 0 0 0 0 0 9 6 0 ( 38) ARG71 0 0 0 0 0 0 0 0 0 6 0 0 ( 40) TYR73 0 0 0 0 0 0 0 0 0 4 0 0 ( 41) TYR74 0 0 0 0 0 0 0 0 47 0 0 0 ( 49) PRO82 0 0 0 0 0 0 0 0 0 6 0 0 ( 51) LYS84 0 0 0 0 0 0 2 7 2 0 0 0 prot.sequence snpggsqvDaegnpfweisdkrrvgiSqFKkMdFiNiReYYeaggemkPgKkgigltvdqytaflkaipainaelrsrghdit >5zg9_AB:ssDNA-binding_transcriptional_regulator_domain; title=CRYSTAL STRUCTURE OF MOSUB1-SSDNA COMPLEX IN PHOSPHATE BUFFER organism=MAGNAPORTHE ORYZAE (STRAIN P131) / MAGNAPORTHE ORYZAE (STRAIN P131) / MAGNAPORTHE ORYZAE (STRAIN P131) / MAGNAPORTHE ORYZAE (STRAIN P131) DNA sequence DT(C1) DT(C2) DT(C3) DT(C4) DT(C5) DT(C6) DT(C7) DT(C8) DT(C9) DT(C10) DT(C11) DT(C12) chainA ( 27) SER60 0 0 0 0 0 0 0 0 0 2 6 0 ( 29) PHE62 0 0 0 0 0 0 0 0 0 0 38 2 ( 30) LYS63 0 0 0 0 0 0 0 0 0 0 0 3 ( 32) MET65 0 0 0 0 0 0 0 0 0 0 0 14 ( 34) PHE67 0 0 0 0 0 0 0 0 0 0 3 9 ( 36) ASN69 0 0 0 0 0 0 0 0 0 9 6 0 ( 38) ARG71 0 0 0 0 0 0 0 0 0 6 0 0 ( 40) TYR73 0 0 0 0 0 0 0 0 0 4 0 0 ( 41) TYR74 0 0 0 0 0 0 0 0 47 0 0 0 ( 49) PRO82 0 0 0 0 0 0 0 0 0 6 0 0 ( 51) LYS84 0 0 0 0 0 0 2 7 2 0 0 0 chainB ( 29) PHE62 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence snpggsqvDaegnpfweisdkrrvgiSqFKkMdFiNiReYYeaggemkPgKkgigltvdqytaflkaipainaelrsrghdit/snpggsqvdaegnpfweisdkrrvgisqFkkmdfinireyyeaggemkpgkkgigltvdqytaflkaipainaelrsrghdi >5zgn_ABDE:Ribbon-helix-helix; title=THE CRYSTAL STRUCTURE OF KACTA-DNA COMPLEX organism=? DNA sequence DT(H1):DA(G27) DC(H2):DG(G26) DA(H3):DT(G25) DT(H4):DA(G24) DG(H5):DC(G23) DT(H6):DA(G22) DA(H7):DT(G21) DC(H8):DG(G20) DG(H9):DC(G19) DG(H10):DC(G18) DT(H11):DA(G17) DT(H12):DA(G16) DA(H13):DT(G15) DA(H14):DT(G14) DT(H15):DA(G13) DA(H16):DT(G12) DA(H17):DT(G11) DC(H18):DG(G10) DC(H19):DG(G9) DG(H20):DC(G8) DT(H21):DA(G7) DA(H22):DT(G6) DC(H23):DG(G5) DA(H24):DT(G4) DT(H25):DA(G3) DT(H26):DA(G2) DT(H27):DA(G1) chainA ( 6) ARG8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 12 8 0 0 0 0 0 0 ( 8) ASP10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 ( 10) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 chainB ( 4) ARG8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 18 0 0 0 0 0 0 0 ( 6) ASP10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 2 0 0 0 0 0 ( 8) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 13 0 0 0 chainD ( 6) ARG8 0 0 0 0 0 0 8 11 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ASP10 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG12 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG8 0 0 0 0 0 0 0 19 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ASP10 0 0 0 0 0 2 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG12 0 0 0 12 15 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alkkqRiDlRltdddksiieeaaaisnqtitqfvvasaseraaevieqhrrmvlneqswslvmeaitqp/kkqRiDlRltdddksiieeaaaisnqtitqfvvasaseraaevieqhrrmvlneqswslvmeaitqppapndrlkraakrlq/alkkqRiDlRltdddksiieeaaaisnqtitqfvvasaseraaevieqhrrmvlneqswslvmeaitqp/kkqRiDlRltdddksiieeaaaisnqtitqfvvasaseraaevieqhrrmvlneqswslvmeaitqppapndrlkraakrlq >5zgn_E:Ribbon-helix-helix; title=THE CRYSTAL STRUCTURE OF KACTA-DNA COMPLEX organism=? DNA sequence DT(H1):DA(G27) DC(H2):DG(G26) DA(H3):DT(G25) DT(H4):DA(G24) DG(H5):DC(G23) DT(H6):DA(G22) DA(H7):DT(G21) DC(H8):DG(G20) DG(H9):DC(G19) DG(H10):DC(G18) DT(H11):DA(G17) DT(H12):DA(G16) DA(H13):DT(G15) DA(H14):DT(G14) DT(H15):DA(G13) DA(H16):DT(G12) DA(H17):DT(G11) DC(H18):DG(G10) DC(H19):DG(G9) DG(H20):DC(G8) DT(H21):DA(G7) DA(H22):DT(G6) DC(H23):DG(G5) DA(H24):DT(G4) DT(H25):DA(G3) DT(H26):DA(G2) DT(H27):DA(G1) chainE ( 4) ARG8 0 0 0 0 0 0 0 19 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ASP10 0 0 0 0 0 2 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG12 0 0 0 12 15 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkqRiDlRltdddksiieeaaaisnqtitqfvvasaseraaevieqhrrmvlneqswslvmeaitqppapndrlkraakrlq >5zjq_A:Homeodomain-like; title=STRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'RED14' DNA SEQUENCE organism=DROSOPHILA MELANOGASTER DNA sequence DG(D1):DC(C14) DC(D2):DG(C13) DA(D3):DT(C12) DT(D4):DA(C11) DG(D5):DC(C10) DA(D6):DT(C9) DT(D7):DA(C8) DT(D8):DA(C7) DT(D9):DA(C6) DA(D10):DT(C5) DT(D11):DA(C4) DG(D12):DC(C3) DA(D13):DT(C2) DC(D14):DG(C1) chainA ( 6) ARG23 0 0 0 0 0 1 10 13 6 0 0 0 0 0 ( 48) ILE65 0 0 0 0 0 0 0 0 0 2 4 0 0 0 ( 51) GLN68 0 0 0 0 0 0 0 0 0 0 1 2 4 0 ( 52) ASN69 0 0 0 0 0 0 0 0 8 12 0 0 0 0 ( 55) MET72 0 0 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence ewtkkRkpyskfqtlelekeflfnayvskqkrwelarnlqlterqvkIwfQNrrMknkknsqr >5zjq_AB:Homeodomain-like; title=STRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'RED14' DNA SEQUENCE organism=DROSOPHILA MELANOGASTER DNA sequence DG(C1):DC(D14) DT(C2):DA(D13) DC(C3):DG(D12) DA(C4):DT(D11) DT(C5):DA(D10) DA(C6):DT(D9) DA(C7):DT(D8) DA(C8):DT(D7) DT(C9):DA(D6) DC(C10):DG(D5) DA(C11):DT(D4) DT(C12):DA(D3) DG(C13):DC(D2) DC(C14):DG(D1) chainA ( 6) ARG23 0 0 0 0 0 6 13 10 1 0 0 0 0 0 ( 48) ILE65 0 0 0 4 2 0 0 0 0 0 0 0 0 0 ( 51) GLN68 0 4 2 1 0 0 0 0 0 0 0 0 0 0 ( 52) ASN69 0 0 0 0 12 8 0 0 0 0 0 0 0 0 ( 55) MET72 0 0 4 0 0 0 0 0 0 0 0 0 0 0 chainB ( 3) ARG4 0 0 0 0 0 0 0 4 7 13 0 0 0 0 ( 5) ARG6 0 0 0 0 0 0 0 0 0 8 10 7 0 0 ( 50) ASN51 0 0 0 0 0 0 0 3 1 0 0 0 0 0 ( 54) ASN55 0 0 0 0 0 0 0 1 10 6 0 0 0 0 ( 57) ILE58 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 58) ARG59 0 0 0 0 0 0 0 0 3 10 13 0 0 0 prot.sequence ewtkkRkpyskfqtlelekeflfnayvskqkrwelarnlqlterqvkIwfQNrrMknkknsqr/arRkRrnfskqaseilneyfyshlsnpypseeakeelarkcgitvsqvsNwfgNkrIRykknigkaqeeanly >5zjr_AB:Homeodomain-like; title=STRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'MAGENTA14' DNA SEQUENCE organism=DROSOPHILA MELANOGASTER DNA sequence DG(D1):DC(C14) DC(D2):DG(C13) DA(D3):DT(C12) DT(D4):DA(C11) DG(D5):DC(C10) DA(D6):DT(C9) DT(D7):DA(C8) DT(D8):DA(C7) DT(D9):DA(C6) DA(D10):DT(C5) DC(D11):DG(C4) DG(D12):DC(C3) DA(D13):DT(C2) DC(D14):DG(C1) chainA ( 7) ARG23 0 0 0 0 0 0 10 14 7 0 0 0 0 0 ( 49) ILE65 0 0 0 0 0 0 0 0 0 3 3 0 0 0 ( 52) GLN68 0 0 0 0 0 0 0 0 0 0 0 1 6 0 ( 53) ASN69 0 0 0 0 0 0 0 0 5 11 1 0 0 0 ( 55) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 56) MET72 0 0 0 0 0 0 0 0 0 0 0 3 0 0 chainB ( 3) ARG3 0 0 0 0 10 5 3 0 0 0 0 0 0 0 ( 6) ARG6 0 0 7 10 9 0 0 0 0 0 0 0 0 0 ( 51) ASN51 0 0 0 0 0 1 3 0 0 0 0 0 0 0 ( 55) ASN55 0 0 0 0 5 13 1 0 0 0 0 0 0 0 ( 58) ILE58 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 59) ARG59 0 0 0 17 13 3 0 0 0 0 0 0 0 0 prot.sequence ewtrkkRkpyskfqtlelekeflfnayvskqkrwelarnlqlterqvkIwfQNrRMknkknsqr/daRrkRrnfskqaseilneyfyshlsnpypseeakeelarkcgitvsqvsNwfgNkrIRykknigkaqeeanly >5zjr_B:Homeodomain-like; title=STRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'MAGENTA14' DNA SEQUENCE organism=DROSOPHILA MELANOGASTER DNA sequence DG(D1):DC(C14) DC(D2):DG(C13) DA(D3):DT(C12) DT(D4):DA(C11) DG(D5):DC(C10) DA(D6):DT(C9) DT(D7):DA(C8) DT(D8):DA(C7) DT(D9):DA(C6) DA(D10):DT(C5) DC(D11):DG(C4) DG(D12):DC(C3) DA(D13):DT(C2) DC(D14):DG(C1) chainB ( 3) ARG3 0 0 0 0 10 5 3 0 0 0 0 0 0 0 ( 6) ARG6 0 0 7 10 9 0 0 0 0 0 0 0 0 0 ( 51) ASN51 0 0 0 0 0 1 3 0 0 0 0 0 0 0 ( 55) ASN55 0 0 0 0 5 13 1 0 0 0 0 0 0 0 ( 58) ILE58 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 59) ARG59 0 0 0 17 13 3 0 0 0 0 0 0 0 0 prot.sequence daRrkRrnfskqaseilneyfyshlsnpypseeakeelarkcgitvsqvsNwfgNkrIRykknigkaqeeanly >5zjs_A:Homeodomain-like; title=STRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'BLUE14' DNA SEQUENCE organism=DROSOPHILA MELANOGASTER DNA sequence DG(C1):DC(D14) DT(C2):DA(D13) DC(C3):DG(D12) DA(C4):DT(D11) DT(C5):DA(D10) DT(C6):DA(D9) DA(C7):DT(D8) DA(C8):DT(D7) DT(C9):DA(D6) DC(C10):DG(D5) DA(C11):DT(D4) DT(C12):DA(D3) DG(C13):DC(D2) DC(C14):DG(D1) chainA ( 4) ARG23 0 0 0 0 0 2 9 7 2 0 0 0 0 0 ( 46) ILE65 0 0 0 3 2 0 0 0 0 0 0 0 0 0 ( 49) GLN68 0 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN69 0 0 0 0 9 4 0 0 0 0 0 0 0 0 ( 53) MET72 0 0 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wkkRkpyskfqtlelekeflfnayvskqkrwelarnlqlterqvkIwfQNrrMknkkn >5zjs_AB:Homeodomain-like; title=STRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'BLUE14' DNA SEQUENCE organism=DROSOPHILA MELANOGASTER DNA sequence DG(C1):DC(D14) DT(C2):DA(D13) DC(C3):DG(D12) DA(C4):DT(D11) DT(C5):DA(D10) DT(C6):DA(D9) DA(C7):DT(D8) DA(C8):DT(D7) DT(C9):DA(D6) DC(C10):DG(D5) DA(C11):DT(D4) DT(C12):DA(D3) DG(C13):DC(D2) DC(C14):DG(D1) chainA ( 4) ARG23 0 0 0 0 0 2 9 7 2 0 0 0 0 0 ( 46) ILE65 0 0 0 3 2 0 0 0 0 0 0 0 0 0 ( 49) GLN68 0 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN69 0 0 0 0 9 4 0 0 0 0 0 0 0 0 ( 53) MET72 0 0 4 0 0 0 0 0 0 0 0 0 0 0 chainB ( 4) ARG6 0 0 0 0 0 0 0 0 0 1 10 13 0 0 ( 49) ASN51 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 53) ASN55 0 0 0 0 0 0 0 1 12 4 0 0 0 0 ( 57) ARG59 0 0 0 0 0 0 0 0 3 10 13 0 0 0 prot.sequence wkkRkpyskfqtlelekeflfnayvskqkrwelarnlqlterqvkIwfQNrrMknkkn/rrkRrnfskqaseilneyfyshlsnpypseeakeelarkcgitvsqvsNwfgNkriRykknigkaqeeanly >5zjt_E:Homeodomain-like; title=STRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'BLACK14' DNA SEQUENCE organism=DROSOPHILA MELANOGASTER DNA sequence DG(G-1):DC(H16) DC(G0):DG(H15) DA(G1):DT(H14) DT(G2):DA(H13) DG(G3):DC(H12) DA(G4):DT(H11) DT(G5):DA(H10) DA(G6):DT(H9) DA(G7):DT(H8) DA(G8):DT(H7) DT(G9):DA(H6) DG(G10):DC(H5) DA(G11):DT(H4) DC(G12):DG(H3) chainE ( 3) ARG23 0 0 0 0 0 0 0 6 12 11 0 0 0 0 ( 45) ILE65 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 48) GLN68 0 0 1 6 1 0 0 0 0 0 0 0 0 0 ( 49) ASN69 0 0 0 0 0 0 13 7 0 0 0 0 0 0 ( 52) MET72 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence kkRkpyskfqtlelekeflfnayvskqkrwelarnlqlterqvkIwfQNrrMknkkns >5zk1_AC:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF THE CRTC2(SEMET)-CREB-CRE COMPLEX organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DC(B-10) DT(B-9) DT(B-8) DG(B-7) DG(B-6) DC(B-5) DT(B-4) DG(B-3) DA(B-2) DC(B-1) DG(B1) DT(B2) DC(B3) DA(B4) DG(B5) DC(B6) DC(B7) DA(B8) DA(B9) DG(B10) chainA ( 9) ASN293 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 ( 13) ALA297 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 17) ARG301 0 0 0 0 0 0 0 0 0 11 6 0 0 0 0 0 0 0 0 0 chainC ( 3) ARG20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence krevrlmkNreaAresRrkkkeyvkclenrvavlenqnktlieelkalkdlys/npRkfsekialqkqrqaeetaafeevmmdigstrlqaqk >5zk1_C: title=CRYSTAL STRUCTURE OF THE CRTC2(SEMET)-CREB-CRE COMPLEX organism=MUS MUSCULUS DNA sequence DC(B-10) DT(B-9) DT(B-8) DG(B-7) DG(B-6) DC(B-5) DT(B-4) DG(B-3) DA(B-2) DC(B-1) DG(B1) DT(B2) DC(B3) DA(B4) DG(B5) DC(B6) DC(B7) DA(B8) DA(B9) DG(B10) chainC ( 3) ARG20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence npRkfsekialqkqrqaeetaafeevmmdigstrlqaqk >5zki_B:His-Me_finger_endonucleases; title=HUMAN EXOG-H140A IN COMPLEX WITH DUPLEX DNA organism=HOMO SAPIENS DNA sequence DC(F1):DG(E12) DG(F2):DC(E11) DG(F3):DC(E10) DG(F4):DC(E9) DA(F5):DT(E8) DT(F6):DA(E7) DA(F7):DT(E6) DT(F8):DA(E5) DC(F9):DG(E4) DC(F10):DG(E3) DC(F11):DG(E2) DG(F12):DC(E1) chainB ( 53) ARG109 0 0 0 0 0 0 0 0 0 2 4 0 ( 54) LYS110 0 0 0 0 0 0 0 0 1 6 0 0 ( 57) LYS113 0 0 0 0 0 2 0 0 0 0 0 0 (116) SER172 0 0 0 0 0 0 0 0 0 0 9 5 (120) ASN176 0 0 0 0 0 0 0 0 0 0 0 5 (124) MET180 0 0 0 0 0 0 0 0 0 0 0 1 (255) LEU311 0 0 0 0 0 0 0 0 0 0 0 17 (258) ARG314 0 0 0 0 0 0 0 0 0 0 0 13 (259) LYS315 0 0 0 0 0 0 0 0 0 0 7 15 (264) ARG320 0 0 0 0 0 0 0 3 9 0 0 0 prot.sequence aekavleqfgfpltgtearcytnhalsydqakrvprwvlehiskskimgdadRKhcKfkpdpnipptfsafnedyvgsgwsrgamapagnnkfsskamaetfylsnivpqdfdnnSgywNrieMycrelterfedvwvvsgpltlpqtrgdgkkivsyqvigednvavpshlykvilarrssvsteplalgafvvpneaigfqpqltefqvslqdleklsglvffphldrtsdirnicsvdtcklldfqeftlyLstRKiegaRsvlrlekimenlknaeiepddyfmsryekkleelkakeqs >5zkj_B:His-Me_finger_endonucleases; title=HUMAN EXOG-H140A IN COMPLEX WITH RNA/DNA HYBRID DUPLEX organism=Homo sapiens DNA sequence DC(D1) DG(D2) DT(D3) DG(D4) DA(D5) DC(D6) DA(D7) DT(D8) DC(D9) DC(D10) DC(D11) DG(D12) chainB ( 58) LYS113 0 0 0 2 0 0 0 0 0 0 0 0 (117) SER172 0 0 0 0 0 0 0 0 0 0 0 5 (121) ASN176 0 0 0 0 0 0 0 0 0 0 0 2 (252) PHE307 0 0 0 0 0 0 0 0 0 0 0 1 (256) LEU311 0 0 0 0 0 0 0 0 0 0 0 8 (260) LYS315 0 0 0 0 0 0 0 0 0 0 3 5 prot.sequence saekavleqfgfpltgtearcytnhalsydqakrvprwvlehiskskimgdadrkhcKfkpdpnipptfsafnedyvgsgwsrgamapagnnkfsskamaetfylsnivpqdfdnnSgywNriemycrelterfedvwvvsgpltlpqtrgdgkkivsyqvigednvavpshlykvilarrssvsteplalgafvvpneaigfqpqltefqvslqdleklsglvffphldrtsdirnicsvdtcklldfqeFtlyLstrKiegarsvlrlekimenlknaeiepddyfmsryekkleelkake >5zko_ACGH:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF THE CRTC2-CREB-CRE COMPLEX organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DC(B-10):DG(D10) DT(B-9):DA(D9) DT(B-8):DA(D8) DG(B-7):DC(D7) DG(B-6):DC(D6) DC(B-5):DG(D5) DT(B-4):DA(D4) DG(B-3):DC(D3) DA(B-2):DT(D2) DC(B-1):DG(D1) DG(B1):DC(D-1) DT(B2):DA(D-2) DC(B3):DG(D-3) DA(B4):DT(D-4) DG(B5):DC(D-5) DC(B6):DG(D-6) DC(B7):DG(D-7) DA(B8):DT(D-8) DA(B9):DT(D-9) DG(B10):DC(D-10) chainA ( 9) ASN293 0 0 0 0 0 0 0 0 0 0 0 6 5 2 0 0 0 0 0 0 ( 13) ALA297 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 16) CYS300 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 17) ARG301 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 chainC ( 9) ASN293 0 0 0 0 0 1 2 5 5 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG294 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 13) ALA297 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 16) CYS300 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG301 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 chainG ( 5) ARG20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 chainH ( 6) ARG20 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krevrlmkNreaAreCRrkkkeyvkclenrvavlenqnktlieelkalkdlyc/krevrlmkNReaAreCRrkkkeyvkclenrvavlenqnktlieelkalkdlyc/asnpRkfsekialqkqrqaeetaafeevmmdigstrlqaqklr/sasnpRkfsekialqkqrqaeetaafeevmmdigstrlqaqklr >5zko_G: title=CRYSTAL STRUCTURE OF THE CRTC2-CREB-CRE COMPLEX organism=MUS MUSCULUS DNA sequence DC(D-10):DG(B10) DT(D-9):DA(B9) DT(D-8):DA(B8) DG(D-7):DC(B7) DG(D-6):DC(B6) DC(D-5):DG(B5) DT(D-4):DA(B4) DG(D-3):DC(B3) DA(D-2):DT(B2) DC(D-1):DG(B1) DG(D1):DC(B-1) DT(D2):DA(B-2) DC(D3):DG(B-3) DA(D4):DT(B-4) DG(D5):DC(B-5) DC(D6):DG(B-6) DC(D7):DG(B-7) DA(D8):DT(B-8) DA(D9):DT(B-9) DG(D10):DC(B-10) chainG ( 5) ARG20 0 0 0 0 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence asnpRkfsekialqkqrqaeetaafeevmmdigstrlqaqklr >5zlv_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX WITH 50MM MGCL2 organism=Escherichia coli K-12 DNA sequence DA(B840):DT(C874) DG(B841):DC(C873) DG(B842):DC(C872) DG(B843):DC(C871) DT(B844):DA(C870) DC(B845):DG(C869) DC(B846):DG(C868) DT(B847):DA(C867) DA(B848):DT(C866) DG(B849):DC(C865) DG(B850):DC(C864) DA(B851):DT(C863) DC(B852):DG(C862) DC(B853):DG(C861) DC(B854):DG(C860) chainA ( 14) PHE13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) VAL40 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER42 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER55 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA56 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) GLU246 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcfFaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrSAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqttqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >5zmc_B:"Winged_helix"_DNA-binding_domain; title=STRUCTURAL BASIS FOR REACTIVATION OF -146C>T MUTANT TERT PROMOTER BY COOPERATIVE BINDING OF P52 AND ETS1/2 organism=HOMO SAPIENS DNA sequence DG(C-4):DC(D122) DG(C-3):DC(D121) DG(C-2):DC(D120) DG(C-1):DC(D119) DA(C0):DT(D118) DC(C1):DG(D117) DC(C2):DG(D116) DC(C3):DG(D115) DG(C4):DC(D114) DG(C5):DC(D113) DA(C6):DT(D112) DA(C7):DT(D111) DG(C8):DC(D110) DG(C9):DC(D109) DG(C10):DC(D108) chainB ( 57) LYS388 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 60) ARG391 0 0 0 0 0 0 0 0 25 16 8 3 0 0 0 ( 63) ARG394 0 0 0 0 0 0 0 14 18 0 0 0 0 0 0 ( 64) TYR395 0 0 0 0 0 0 0 0 0 1 6 8 11 0 0 prot.sequence sgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkp >5zmd_AC:Clavaminate_synthase-like; title=CRYSTAL STRUCTURE OF FTO IN COMPLEX WITH M6DA MODIFIED SSDNA organism=Homo sapiens DNA sequence DC(D9):DG(B10) DG(D10):DC(B9) chainA (148) TYR214 0 42 chainC ( 52) LYS88 0 4 prot.sequence efyqqwqlkypklilreassvseelhkevqeafltlhkhgclfrdlvrikgkdlltpvsrilignpgctykylntrlftvpwpvkgnikhteaeiaaacetflklndylqietiqaleelaakevdiksraaynvtllnfmdpqkmpYlkeepyfgmgkmavswhhdenlvdrsavavysyscediwhvgfkiswdietpglaiplhqgdcyfmlddlnathkhcvlagsqprfssthrvaecstgtldyilqrcqlalqnvcvslksfepavlkqgeeihnevefewlrqfwfqgnryrkctdwwcqpmaqlealwkkmegvtnavlhevkqrneiltailasltarqnlrrewharcqsriartlpadqkpecrpywekddasmplpfdltdivselrgq/efyqqwqlkypklilreassvseelhkevqeafltlhkhgclfrdlvrikgKdlltpvsrilignpgctykylntrlftvpwpvknikhteaeiaaacetflklndylqietiqaleelaadevdiksraaynvtllnfmdpqkmpylkeepyfgmgkmavswhhdenlvdrsavavysyscdiwhvgfkiswdietpglaiplhqgdcyfmlddlnathkhcvlagsqprfssthrvaecstgtldyilqrcqlalqnslksfepavlkqgeeihnevefewlrqfwfqgnryrkctdwwcqpmaqlealwkkmegvtnavlhevrneiltailasltarqnlrrewharcqsriartlpadqkpecrpywekddasmplpfdltdivselrgq >5zmd_EG:Clavaminate_synthase-like; title=CRYSTAL STRUCTURE OF FTO IN COMPLEX WITH M6DA MODIFIED SSDNA organism=Homo sapiens DNA sequence DC(F9):DG(H10) DG(F10):DC(H9) chainE ( 52) LYS88 0 2 chainG (150) TYR214 0 49 prot.sequence efyqqwqlkypklilreassvseelhkevqeafltlhkhgclfrdlvrikgKdlltpvsrilignpgctykylntrlftvpwpvkkhteaeiaaacetflklndylqietiqaleelaavdiksraaynvtllnfmdpqkmpylkeepyfgmgkmavswhhdenlvdrsavavysyscediwhvgfkiswdietpglaiplhqgdcyfmlddlnathkhcvlagsqprfssthrvaecstgtldyilqrcqlalqnvdvslksfepavlkqgeeihnevefewlrqfwfqgnryrkctdwwcqpmaqlealwkkmegvtnavlhevqrneiltailasltarqnlrrewharcqsriartlpadqkpecrpywekddasmplpfdltdivselrg/efyqqwqlkypklilreassvseelhkevqeafltlhkhgclfrdlvrikgkdlltpvsrilignpgctykylntrlftvpwpvkgsnikhteaeiaaacetflklndylqietiqaleelaakdevdiksraaynvtllnfmdpqkmpYlkeepyfgmgkmavswhhdenlvdrsavavysyscdiwhvgfkiswdietpglaiplhqgdcyfmlddlnathkhcvlagsqprfssthrvaecstgtldyilqrcqlalqnvslksfepavlkqgeeihnevefewlrqfwfqgnryrkctdwwcqpmaqlealwkkmegvtnavlhevkreqrneiltailasltarqnlrrewharcqsriartlpadqkpecrpywekddasmplpfdltdivselrgq >5zmd_G:Clavaminate_synthase-like; title=CRYSTAL STRUCTURE OF FTO IN COMPLEX WITH M6DA MODIFIED SSDNA organism=Homo sapiens DNA sequence DC(F9):DG(H10) DG(F10):DC(H9) chainG (150) TYR214 0 49 prot.sequence efyqqwqlkypklilreassvseelhkevqeafltlhkhgclfrdlvrikgkdlltpvsrilignpgctykylntrlftvpwpvkgsnikhteaeiaaacetflklndylqietiqaleelaakdevdiksraaynvtllnfmdpqkmpYlkeepyfgmgkmavswhhdenlvdrsavavysyscdiwhvgfkiswdietpglaiplhqgdcyfmlddlnathkhcvlagsqprfssthrvaecstgtldyilqrcqlalqnvslksfepavlkqgeeihnevefewlrqfwfqgnryrkctdwwcqpmaqlealwkkmegvtnavlhevkreqrneiltailasltarqnlrrewharcqsriartlpadqkpecrpywekddasmplpfdltdivselrgq >5zmn_A: title=SULFUR BINDING DOMAIN AND SRA DOMAIN OF SCOMCRA COMPLEXED WITH PHOSPHOROTHIOATED DNA organism=? DNA sequence DC(B1):DG(C10) DC(B2):DG(C9) DC(B3):DG(C8) DG(B4):DC(C7) GS(B5):DC(C6) DC(B6):GS(C5) DC(B7):DG(C4) DG(B8):DC(C3) DG(B9):DC(C2) DG(B10):DC(C1) chainA ( 15) ARG109 0 0 0 0 0 0 1 0 0 0 ( 69) ARG163 0 0 0 1 0 0 0 0 0 0 ( 70) TYR164 0 0 0 1 5 7 0 0 0 0 ( 92) THR186 0 0 0 7 0 0 0 0 0 0 ( 93) SER187 0 0 0 6 9 1 0 0 0 0 ( 94) ARG188 0 0 0 0 0 2 0 0 0 0 ( 96) ARG190 0 0 0 0 0 7 9 3 0 0 prot.sequence ktfhrrvgdvrparRamgpalhrpvlllwaigqavaraprlqpwsttrdavaplmekygqvedgvdgvRYpfwalvrddlwcveqaeeltlTSRgRrptleslnavdpsaglreddynllrsqpeaaasaaagliaryfhllpaglledfglhellagrwpdalrpllgetfkdrdaiwrayggqkmagigcladgilsafsddkgpyadgripdttwiayvgdglsgdqkltdgnelmaehqavgralrywhkpfqgqwsfetwavivqrrlrwglgedklprreflwvlapvpsperetwppevlealeadtgelhddtgdy >5zmo_A: title=SULFUR BINDING DOMAIN OF SCOMCRA COMPLEXED WITH PHOSPHOROTHIOATED DNA organism=? DNA sequence DC(C2):DG(B7) DG(C3):DC(B6) GS(C4):DC(B5) DC(C5):GS(B4) DC(C6):DG(B3) DG(C7):DC(B2) DG(C8):DC(B1) chainA ( 71) TYR164 0 1 6 8 0 0 0 ( 93) THR186 0 6 0 0 0 0 0 ( 94) SER187 0 1 9 2 0 0 0 ( 97) ARG190 0 0 0 12 16 8 0 ( 98) ARG191 0 5 8 8 0 0 0 prot.sequence pktfhrrvgdvrparramgpalhrpvlllwaigqavaraprlqpwsttrdavaplmekygqvedgvDgvrYpfwalvrddlwcveqaeeltlTSrgRRptleslnavdpsaglreddynllrsqpeaaasaaagliaryfhllpaglledfglhella >5zoe_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF D181A HFEN1 IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(B13):DC(C7) DA(B14):DT(C6) DC(B15):DG(C5) DG(B16):DC(C4) DG(B17):DC(C3) DG(B18):DC(C2) chainA ( 44) ALA45 3 0 0 0 0 0 ( 45) VAL46 12 0 0 0 0 0 ( 47) GLN48 10 7 0 0 0 0 ( 52) LEU53 8 0 0 0 0 0 ( 64) MET65 7 0 0 0 0 0 prot.sequence giqglakliadvapsairendiksyfgrkvaidasmsiyqfliAVrQggdvLqneegettshlMgmfyrtirmmengikpvyvfdgkvkvtkqhndeckhllslmgipyldapseaeascaalvkagkvyaaatedmacltfgspvlmrhltaseakklpiqefhlsrilqelglnqeqfvdlcillgsdycesirgigpkravdliqkhksieeivrrldpnkypvpenwlhkeahqlflepevldpesvelkwsepneeelikfmcgekqfseeRirsgvkrlsksrq >5zof_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF D181A/R192F HFEN1 IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(B13):DC(C7) DA(B14):DT(C6) DC(B15):DG(C5) DG(B16):DC(C4) DG(B17):DC(C3) DG(B18):DC(C2) chainA ( 44) ALA45 1 0 0 0 0 0 ( 45) VAL46 11 0 0 0 0 0 ( 47) GLN48 9 3 0 0 0 0 ( 52) LEU53 6 0 0 0 0 0 ( 64) MET65 6 0 0 0 0 0 prot.sequence giqglakliadvapsairendiksyfgrkvaidasmsiyqfliAVrQggdvLqneegettshlMgmfyrtirmmengikpvyvfdgkvkvtkqhndeckhllslmgipyldapseaeascaalvkagkvyaaatedmacltfgspvlmfhltaseakklpiqefhlsrilqelglnqeqfvdlcillgsdycesirgigpkravdliqkhksieeivrrldpnkypvpenwlhkeahqlflepevldpesvelkwsepneeelikfmcgekqfseerirsgvkrlsksrq >5zog_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF R192F HFEN1 IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(B2):DG(C18) DC(B3):DG(C17) DC(B4):DG(C16) DG(B5):DC(C15) DT(B6):DA(C14) DC(B7):DG(C13) chainA ( 44) ALA45 0 0 0 0 0 2 ( 45) VAL46 0 0 0 0 0 10 ( 47) GLN48 0 0 0 0 1 5 ( 52) LEU53 0 0 0 0 0 11 ( 64) MET65 0 0 0 0 0 7 prot.sequence giqglakliadvapsairendiksyfgrkvaidasmsiyqfliAVrQggdvLqneegettshlMgmfyrtirmmengikpvyvfdgkppqlksgelakrkrlvkvtkqhndeckhllslmgipyldapseaeascaalvkagkvyaaatedmdcltfgspvlmfhltaseakklpiqefhlsrilqelglnqeqfvdlcillgsdycesirgigpkravdliqkhksieeivrrldpnkypvpenwlhkeahqlflepevldpesvelkwsepneeelikfmcgekqfseerirsgvkrlsksrqklaaalehhhh >5zqf_A:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF HUMAN TOPOISOMERASE II BETA IN COMPLEX WITH 5- IODOURIDINE-CONTAINING-DNA IN SPACE GROUP P3221 organism=Homo sapiens DNA sequence DG(B2):DC(C19) DC(B3):DG(C18) DC(B4):DG(C17) DG(B5):DC(C16) DA(B6):DC(C14) DG(B7):DG(C13) DC(B8):DA(C12) chainA ( 52) ARG503 0 0 0 0 0 0 2 ( 54) LYS505 0 0 0 0 2 2 3 (309) ALA779 0 0 0 0 0 2 0 (402) ILE872 0 0 21 13 0 0 0 (407) ALA877 0 0 1 0 0 0 0 prot.sequence kgipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplRgKilnvreashkqimenaeinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitpivkalsfysipefdewkkikyykglgtstakeakeyfadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlhglpeqflykhltyndfinkelilfsnsdnersipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeqAlmmtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspryiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaegIgtgwAcklpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngtdktpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqegpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >5zr1_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=SACCHAROMYCES CEREVISIAE ORIGIN RECOGNITION COMPLEX BOUND TO A 72-BP ORIGIN DNA CONTAINING ACS AND B1 ELEMENT organism=? DNA sequence DA(H32):DT(G41) DA(H33):DT(G40) DG(H34):DC(G39) DG(H35):DC(G38) DG(H36):DC(G37) DA(H37):DT(G36) DA(H38):DT(G35) DA(H39):DT(G34) DA(H40):DT(G33) DT(H41):DA(G32) DA(H42):DT(G31) DA(H43):DT(G30) DA(H44):DT(G29) DC(H45):DG(G28) DA(H46):DT(G27) DA(H47):DT(G26) DT(H48):DA(G25) DA(H49):DT(G24) DC(H50):DG(G23) DA(H51):DT(G22) DT(H52):DA(G21) DA(H53):DT(G20) DA(H54):DT(G19) DC(H55):DG(G18) DA(H56):DT(G17) DA(H57):DT(G16) DA(H58):DT(G15) DA(H59):DT(G14) DC(H60):DG(G13) DA(H61):DT(G12) DT(H62):DA(G11) DA(H63):DT(G10) DT(H64):DA(G9) DA(H65):DT(G8) DA(H66):DT(G7) DA(H67):DT(G6) DA(H68):DT(G5) DA(H69):DT(G4) DC(H70):DG(G3) DC(H71):DG(G2) DA(H72):DT(G1) chainA ( 6) PHE360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 8) LYS362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 ( 13) ARG367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 ( 18) TYR372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 1 0 0 0 0 0 0 prot.sequence pvirkFtKknvaRakkkYtpfskrfksiaaipdltslpefygnsselmasrfenklkttqkhqivetifskvkkqlnssyylparenefasiylsaysaiesdsattiyvagtpgvgktltvrevvkellsssaqreipdflyveinglkmvkptdcyetlwnkvsgerltwaasmeslefyfkrvpknkkktivvlldeldamvtksqdimynffnwttyenakliviavantmdlperqlgnkitsrigftrimftgytheelkniidlrlkglndsffyvdtktgnailidvrkvrlrmsadaieiasrkvasvsgdarralkvckraaeiaekhymakhgygydgvqtvhithvmkalnetlnshvitfmtrlsftaklfiyallnlmkkngsqeqelgdivdeikllievngsnkfvmeiaktlfqqgsdniseqlriiswdfvlnqlldagilfkqtmkndriccvklnisveeakramnedetlrnl >5zr1_ABCDE:P-loop_containing_nucleoside_triphosphate_hydrolases;Inhibitor_of_apoptosis_IAP_repeat; title=SACCHAROMYCES CEREVISIAE ORIGIN RECOGNITION COMPLEX BOUND TO A 72-BP ORIGIN DNA CONTAINING ACS AND B1 ELEMENT organism=? DNA sequence DA(H32):DT(G41) DA(H33):DT(G40) DG(H34):DC(G39) DG(H35):DC(G38) DG(H36):DC(G37) DA(H37):DT(G36) DA(H38):DT(G35) DA(H39):DT(G34) DA(H40):DT(G33) DT(H41):DA(G32) DA(H42):DT(G31) DA(H43):DT(G30) DA(H44):DT(G29) DC(H45):DG(G28) DA(H46):DT(G27) DA(H47):DT(G26) DT(H48):DA(G25) DA(H49):DT(G24) DC(H50):DG(G23) DA(H51):DT(G22) DT(H52):DA(G21) DA(H53):DT(G20) DA(H54):DT(G19) DC(H55):DG(G18) DA(H56):DT(G17) DA(H57):DT(G16) DA(H58):DT(G15) DA(H59):DT(G14) DC(H60):DG(G13) DA(H61):DT(G12) DT(H62):DA(G11) DA(H63):DT(G10) DT(H64):DA(G9) DA(H65):DT(G8) DA(H66):DT(G7) DA(H67):DT(G6) DA(H68):DT(G5) DA(H69):DT(G4) DC(H70):DG(G3) DC(H71):DG(G2) DA(H72):DT(G1) chainA ( 6) PHE360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 8) LYS362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 ( 13) ARG367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 ( 18) TYR372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 1 0 0 0 0 0 0 chainB ( 20) THR255 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) TRP396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 8 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD (394) PHE485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) TYR486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (398) ASN489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) TYR490 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (341) ARG360 0 0 0 4 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) TYR363 0 0 0 0 0 6 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG366 0 0 0 0 0 0 1 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) LYS439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pvirkFtKknvaRakkkYtpfskrfksiaaipdltslpefygnsselmasrfenklkttqkhqivetifskvkkqlnssyylparenefasiylsaysaiesdsattiyvagtpgvgktltvrevvkellsssaqreipdflyveinglkmvkptdcyetlwnkvsgerltwaasmeslefyfkrvpknkkktivvlldeldamvtksqdimynffnwttyenakliviavantmdlperqlgnkitsrigftrimftgytheelkniidlrlkglndsffyvdtktgnailidvrkvrlrmsadaieiasrkvasvsgdarralkvckraaeiaekhymakhgygydgvqtvhithvmkalnetlnshvitfmtrlsftaklfiyallnlmkkngsqeqelgdivdeikllievngsnkfvmeiaktlfqqgsdniseqlriiswdfvlnqlldagilfkqtmkndriccvklnisveeakramnedetlrnl/assfldtfegyfdqrkivrTnaksrhtmsmapdvtreefslvsnffnenfqkrprqklfeiqkkmfpqywfeltqgfsllfygvgskrnfleefaidylspkiaysqlvnsipclilngynpscnyrdvfkeitdllvpaeltrsetkyWgnhvilqiqkmidfyknqpldiklilvvhnldgpsirkntfqtmlsflsvirqiaivastdhiyapllwdnmkaqnynfvfhdisnfepstvestfqdvmkmgksdtssgaegakyvlqsltvnskkmykllietqmqnmgnlsantgpkrgtqrtgvelklfnhlcaadfiasneialrsmlrefiehkmanitknnsgmeiiwvpytyaelekllktvlntl/fadaqrshytvypslpqsnKndkhipfvkllsgkesevnvekrwelyhqlhshfhdqvdhiidnieadlkaeisdllysettqkrrcfntifllgsdsttkielkdessrynvlieltpkespnvrmmlrrsmyklysaadaeehndvsYdlslvenfkrlfgkdlamvfnfkdvdsinfntldnfiillksafkydhvkislifnintnlsnieknlrqstirllkrnyhkldvssnkgfkygnqifqsfldtvdgklnlsdrfvefilskmanntnhnlqlltkmldyslmsyffqnafsvfidpvnvdflnddylkilsrcptfmffveglikqhapadeilslltnknrgleeffveflvrenpinghakfvarfleeelnitnfnlielyhnlligkldsyldrwsackeykdrlhfepidtifqelftldnrsglltqsifpsyksniednllsweqvlpsldkenydtlsgdldkimapvlgqlfklyreanmtiniydfyiafretlpkeeilnfirkdpsntkllelaetpdafdkvalilfmqaifafenmglikfqstksydlvekcvwrgi/dpgfgslqrrllqqlygtlptdekiiftylqdcqqeidriikqsiiqkeshsvilvgprqsyktylldyelsllqqsykeqfitirlngfihseqtaingiatqleqqlqkihtissgsltevfekilllldssitkitvvfifdeidtfagpvrqtllynlfdmvehsrvpvcifgcttklnileylekrvksrfsqrviympqiqnlddmvdavrnlltvrseispwvsqwnetlekelsdprsnlnrhirmnfetfrslptlknsiiplvatsknfgslctaikscsfldiynknqlsnnltgrlqslsdlelailisaarvalrakdgsfnfnlayaeyekmikainsrintiklwlkkdvknvwenlvqldffteksavglrdnataaFYasNYqfqgtmipfdlrsyqmqiilqelrriipksnmyyswtql/mnvttpevafreyqtnclasyisadpditpsnlilqgysgtgktytlkkyfnanpnlhavwlepvelvswkpllqaiartvqyklktlypnipttdydplqveepfllvktlhnifvqyeslqektclflildgfdslqdldaalfnkyiklnellpkdskinikfiytmletsflqrysthciptvmfprynvdevstilvmsrcgelmedsclrkriieeqitdctddqfqnvaanfihlivqafhsytgndifalndlidfkwpkyvsritkenifeplalyksaiklflstddnlsqtydlsiiskylliasyicsyleprydasifsrktriiqgRaaYgrRkkkevnprylqpslfaierllaifqaifpiqgkaesgslsalreeslmkanievfqnlselhtlkliattmnKnidylspkvrwkvnvpweiikeisesvhfnisdyfsdihe >5zr1_F:Inhibitor_of_apoptosis_IAP_repeat; title=SACCHAROMYCES CEREVISIAE ORIGIN RECOGNITION COMPLEX BOUND TO A 72-BP ORIGIN DNA CONTAINING ACS AND B1 ELEMENT organism=? DNA sequence DT(G1) DG(G2) DG(G3) DT(G4) DT(G5) DT(G6) DT(G7) DT(G8) DA(G9) DT(G10) DA(G11) DT(G12) DG(G13) DT(G14) DT(G15) DT(G16) DT(G17) DG(G18) DT(G19) DT(G20) DA(G21) DT(G22) DG(G23) DT(G24) DA(G25) DT(G26) DT(G27) DG(G28) DT(G29) DT(G30) DT(G31) DA(G32) DT(G33) DT(G34) DT(G35) DT(G36) DC(G37) DC(G38) DC(G39) DT(G40) DT(G41) chainF ( 7) TYR277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 prot.sequence sllvkkYckmtteeiirlcndfelprevaykivdeyninasrlvcpwqlvcglvlnctfivfnerrrkdpridhfivskmcslmltskvddviecvklvkeliigekwfrdlqiryddfdgirydeiifrklgsmlqttnilvtddqyniwkkriemdla >5zrf_A:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF HUMAN TOPOISOMERASE II BETA IN COMPLEX WITH 5- IODOURIDINE-CONTAINING-DNA AND ETOPOSIDE IN SPACE GROUP P21 organism=Homo sapiens DNA sequence DG(C2):DC(F19) DC(C3):DG(F18) DC(C4):DG(F17) DG(C5):DC(F16) DA(C6):DC(F14) DG(C7):DG(F13) DC(C8):DA(F12) chainA ( 54) LYS505 0 0 0 0 2 2 3 (270) ALA779 0 0 0 0 0 1 0 (363) ILE872 0 0 28 15 0 0 0 (368) ALA877 0 0 1 0 0 0 0 prot.sequence kgipklddandaggkhslectliltegdsakslavsglgvigrdrygvfplrgKilnvreashkqimenaEinniikivglqykksyddaeslktlrygkimimtdqdqdgshikgllinfihhnwpsllkhgfleefitkeakeyfadmerhrilfryagpeddaaitlafskkkiddrkewltnfmedrrqrrlhkhltyndfinkelilfsnsDneRSipslvdgfkpgqrkvlftcfkrndkrevkvaqlagsvaemsayhhgeqAlmMtivnlaqnfvgsnninllqpigqfgtrlhggkdaaspryiftmlstlarllfpavddnllkflyddnqrvepewyipiipmvlingaegIgtgwAcKlpnydareivnnvrrmldgldphpmlpnyknfkgtiqelgqnqyavsgeifvvdrntveitelpvrtwtqvykeqvlepmlngtdktpalisdykeyhtdttvkfvvkmteeklaqaeaaglhkvfklqttltcnsmvlfdhmgclkkyetvqdilkeffdlrlsyyglrkewlvgmlgaestklnnqarfilekiqgkitienrskkdliqmlvqrgyesdpvkawkeaqegpdfnyilnmslwsltkekveelikqrdakgrevndlkrkspsdlwkedlaafveeldkvesqered >5zu1_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BZ JUNCTION IN DIVERSE SEQUENCE organism=Homo sapiens DNA sequence DC(E3):DG(F34) DG(E4):DC(F33) DC(E5):DG(F32) DG(E6):DC(F31) DC(E7):DG(F30) DG(E8):DC(F29) DC(E9):DG(F28) DC(E10):DG(F27) DT(E12):DA(F25) DA(E13):DT(F24) DA(E14):DT(F23) DA(E15):DT(F22) DC(E16):DG(F21) chainB ( 41) TYR177 0 0 18 0 0 0 0 0 0 0 0 0 0 prot.sequence shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwk >5zu1_BC:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BZ JUNCTION IN DIVERSE SEQUENCE organism=Homo sapiens DNA sequence DC(E3):DG(F34) DG(E4):DC(F33) DC(E5):DG(F32) DG(E6):DC(F31) DC(E7):DG(F30) DG(E8):DC(F29) DC(E9):DG(F28) DC(E10):DG(F27) DT(E12):DA(F25) DA(E13):DT(F24) DA(E14):DT(F23) DA(E15):DT(F22) DC(E16):DG(F21) chainB ( 41) TYR177 0 0 18 0 0 0 0 0 0 0 0 0 0 chainC ( 41) TYR177 0 0 0 0 0 18 0 0 0 0 0 0 0 prot.sequence shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwk/shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwki >5zuo_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BZ JUNCTION IN DIVERSE SEQUENCE organism=Homo sapiens DNA sequence DC(E3):DG(F34) DG(E4):DC(F33) DC(E5):DG(F32) DG(E6):DC(F31) DC(E7):DG(F30) DG(E8):DC(F29) DC(E9):DG(F28) DG(E10):DC(F27) DT(E12):DA(F25) DA(E13):DT(F24) DA(E14):DT(F23) DA(E15):DT(F22) DC(E16):DG(F21) DC(E17):DG(F20) chainB ( 41) TYR177 0 0 0 0 0 14 0 0 0 0 0 0 0 0 prot.sequence shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkiavstq >5zuo_BCD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BZ JUNCTION IN DIVERSE SEQUENCE organism=Homo sapiens DNA sequence DG(F20):DC(E17) DG(F21):DC(E16) DT(F22):DA(E15) DT(F23):DA(E14) DT(F24):DA(E13) DA(F25):DT(E12) DC(F27):DG(E10) DG(F28):DC(E9) DC(F29):DG(E8) DG(F30):DC(E7) DC(F31):DG(E6) DG(F32):DC(E5) DC(F33):DG(E4) DG(F34):DC(E3) chainB ( 41) TYR177 0 0 0 0 0 0 0 0 14 0 0 0 0 0 chainC ( 41) TYR177 0 0 0 0 0 0 0 0 0 0 0 15 0 0 chainD ( 41) TYR177 0 0 0 0 0 0 0 16 0 0 0 0 0 0 prot.sequence shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkiavstq/shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkiavs/shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkiav >5zup_BCD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BZ JUNCTION IN DIVERSE SEQUENCE organism=Homo sapiens DNA sequence DG(F20):DC(E17) DG(F21):DC(E16) DT(F22):DA(E15) DT(F23):DA(E14) DT(F24):DA(E13) DA(F25):DT(E12) DC(F27):DA(E10) DG(F28):DC(E9) DC(F29):DG(E8) DG(F30):DC(E7) DC(F31):DG(E6) DG(F32):DC(E5) DC(F33):DG(E4) DG(F34):DC(E3) chainB ( 37) ARG174 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 40) TYR177 0 0 0 0 0 0 0 0 16 0 0 0 0 0 chainC ( 41) TYR177 0 0 0 0 0 0 0 0 0 0 0 18 0 0 chainD ( 41) TYR177 0 0 0 0 0 0 0 16 0 0 0 0 0 0 ( 45) LYS181 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence hmeqrilkfleelgegkattahdlsgklgtpkkeinRvlYslakkgklqkeagtpplwkiavstq/shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslakkgklqkeagtpplwkiavstq/shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslaKkgklqkeagtpplwkiav >5zup_D:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF BZ JUNCTION IN DIVERSE SEQUENCE organism=Homo sapiens DNA sequence DG(F20):DC(E17) DG(F21):DC(E16) DT(F22):DA(E15) DT(F23):DA(E14) DT(F24):DA(E13) DA(F25):DT(E12) DC(F27):DA(E10) DG(F28):DC(E9) DC(F29):DG(E8) DG(F30):DC(E7) DC(F31):DG(E6) DG(F32):DC(E5) DC(F33):DG(E4) DG(F34):DC(E3) chainD ( 41) TYR177 0 0 0 0 0 0 0 16 0 0 0 0 0 0 ( 45) LYS181 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence shmeqrilkfleelgegkattahdlsgklgtpkkeinrvlYslaKkgklqkeagtpplwkiav >5zux_A: title=SOLUTION STRUCTURE OF THE DNA COMPLEX OF THE C-TERMINAL DOMAIN OF ROK organism=BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 DNA sequence DC(B1):DG(C36) DT(B2):DA(C35) DA(B3):DT(C34) DA(B4):DT(C33) DT(B5):DA(C32) DA(B6):DT(C31) DA(B7):DT(C30) DC(B8):DG(C29) DT(B9):DA(C28) DA(B10):DT(C27) DG(B11):DC(C26) DT(B12):DA(C25) DT(B13):DA(C24) DA(B14):DT(C23) DT(B15):DA(C22) DT(B16):DA(C21) DA(B17):DT(C20) DG(B18):DC(C19) chainA ( 7) ARG108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 6 ( 10) ALA111 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 ( 53) ASN154 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 ( 55) THR156 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 ( 56) THR157 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 73) ARG174 0 0 0 0 0 0 0 0 6 14 0 0 0 0 0 0 0 0 prot.sequence gttrrrRgtArpgskaaklreaaiktlkrhnaaiksselqkeiekesgleipNmTTfmqslikmypevkkpyRgqyilegeieslehhhhhh >5zx2_CDF: title=MYCOBACTERIUM TUBERCULOSIS RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH ECF SIGMA FACTOR SIGMA H AND 7NT RNA organism=MYCOBACTERIUM TUBERCULOSIS H37RV DNA sequence DG(G2):DC(H47) DG(G3):DC(H46) DA(G4):DT(H45) DA(G5):DT(H44) DC(G6):DG(H43) DA(G7):DT(H42) DG(G8):DC(H41) DT(G9):DA(H40) DT(G10):DA(H39) DG(G11):DC(H38) DC(G12):DG(H37) DG(G13):DC(H36) DA(G14):DT(H35) DC(G15):DG(H34) DT(G16):DA(H33) DT(G17):DA(H32) DA(G18):DT(H31) DG(G19):DC(H30) DA(G20):DT(H29) DC(G21):DG(H28) DG(G22):DC(H27) DT(G23):DA(H26) DG(G24):DC(H25) DG(G25):DC(H24) DT(G26):DA(H23) DT(G27):DT(H22) DG(G28):DG(H21) DT(G29):DT(H20) DG(G30):DG(H19) DG(G31):DG(H18) DG(G32):DG(H17) DA(G33):DA(H16) DG(G34):DG(H15) DC(G35):DC(H14) DT(G36):DT(H13) DG(G37):DG(H12) DC(G38):DG(H11) DT(G39):DA(H10) DA(G40):DT(H9) DT(G41):DA(H8) DA(G42):DT(H7) DC(G43):DG(H6) DT(G44):DA(H5) DC(G45):DG(H4) DT(G46):DA(H3) DC(G47):DG(H2) DC(G48):DG(H1) chainC ( 72) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (184) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASP227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) GLU285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (343) ILE370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (344) ASP371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 (349) ARG376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (368) ARG395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) ARG398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (375) GLU402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) THR405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) PRO422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (436) LEU463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 (440) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (444) GLU471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (445) VAL472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 chainD (285) GLN287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (286) LYS288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 (289) ARG291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 (387) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (499) ALA501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (500) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 (865) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 (866) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 chainF ( 17) ASP38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LEU45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) MET47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) PRO51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) PHE72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) LYS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) TRP81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) TYR83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ILE85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ASN88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) TYR90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ILE91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) TYR94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) THR110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) TYR166 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) THR179 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) MET181 0 0 0 7 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) SER182 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ARG186 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedFsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvriDRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklRpgEpptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddIDhfgnRrlrtvgeliqnqirvgmsRmeRvvrErmTtqdveaitpqtlinirPvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpggLsreRaglEVrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregededleraaanlgi/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQKklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/deeltarferdaipllDQlyggaLrMtRnPadaedllqetmvKayagfrsFRhgTNlKAWlYRIlTNtYINsYrkkqRqpaeypteqiTdwqlasnaehsstglrsaevealealpdteikealqalpeefrmavyyadvegfpYkeiaeimdtpigTvMSrlhRgrrqlrglla >5zx2_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH ECF SIGMA FACTOR SIGMA H AND 7NT RNA organism=MYCOBACTERIUM TUBERCULOSIS H37RV DNA sequence DG(G2):DC(H47) DG(G3):DC(H46) DA(G4):DT(H45) DA(G5):DT(H44) DC(G6):DG(H43) DA(G7):DT(H42) DG(G8):DC(H41) DT(G9):DA(H40) DT(G10):DA(H39) DG(G11):DC(H38) DC(G12):DG(H37) DG(G13):DC(H36) DA(G14):DT(H35) DC(G15):DG(H34) DT(G16):DA(H33) DT(G17):DA(H32) DA(G18):DT(H31) DG(G19):DC(H30) DA(G20):DT(H29) DC(G21):DG(H28) DG(G22):DC(H27) DT(G23):DA(H26) DG(G24):DC(H25) DG(G25):DC(H24) DT(G26):DA(H23) DT(G27):DT(H22) DG(G28):DG(H21) DT(G29):DT(H20) DG(G30):DG(H19) DG(G31):DG(H18) DG(G32):DG(H17) DA(G33):DA(H16) DG(G34):DG(H15) DC(G35):DC(H14) DT(G36):DT(H13) DG(G37):DG(H12) DC(G38):DG(H11) DT(G39):DA(H10) DA(G40):DT(H9) DT(G41):DA(H8) DA(G42):DT(H7) DC(G43):DG(H6) DT(G44):DA(H5) DC(G45):DG(H4) DT(G46):DA(H3) DC(G47):DG(H2) DC(G48):DG(H1) chainD (285) GLN287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (286) LYS288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 (289) ARG291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 (387) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (499) ALA501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (500) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 (865) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 (866) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQKklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa >5zyt_CD:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF HUMAN MGME1 WITH 3' OVERHANG DOUBLE STRAND DNA3 organism=Homo sapiens DNA sequence DG(H1):DC(G6) DG(H2):DC(G5) DA(H3):DT(G4) DT(H4):DA(G3) DC(H5):DG(G2) DC(H6):DG(G1) chainC chainD ( 28) THR134 0 0 1 0 0 0 ( 32) GLN138 0 0 0 0 4 6 ( 43) LEU149 0 0 0 0 0 11 ( 46) TRP152 0 0 0 0 0 2 ( 59) PHE165 0 0 0 0 2 0 ( 63) THR169 0 0 0 0 7 0 ( 66) VAL172 0 0 0 0 1 0 ( 67) PHE173 0 0 0 53 24 0 prot.sequence rvpqnwfpifnpeplkiplqrnvipsvtrvlqqtmtkqqvfllerwkqrmilelgedgfkeytsnvflqgkrfhealesilspqenllksgyiesvqhilkdvsgvralesavqhetlnyiglldcvaeyqgklcvidwktsekpkpfiqstfdnplqvvaymgamnhdtnysfqvqcglivvaykdgspahphfmdaelcsqywtkwllrleeytekkk/vpqnwfpifnperplkiplqrnvipsvTrvlQqtmtkqqvflLerWkqrmilelgedgFkeyTsnVFlqgkrfhealesilspqenllksgyiesvqhilkdvsgvralesavqhetlnyiglldcvaeyqgklcvidwktsekpkpfiqstfdnplqvvaymgamnhdtnysfqvqcglivvaykdgspahphfmdaelcsqywtkwllrleeytekkk >5zyt_D:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF HUMAN MGME1 WITH 3' OVERHANG DOUBLE STRAND DNA3 organism=Homo sapiens DNA sequence DG(H1):DC(G6) DG(H2):DC(G5) DA(H3):DT(G4) DT(H4):DA(G3) DC(H5):DG(G2) DC(H6):DG(G1) chainD ( 28) THR134 0 0 1 0 0 0 ( 32) GLN138 0 0 0 0 4 6 ( 43) LEU149 0 0 0 0 0 11 ( 46) TRP152 0 0 0 0 0 2 ( 59) PHE165 0 0 0 0 2 0 ( 63) THR169 0 0 0 0 7 0 ( 66) VAL172 0 0 0 0 1 0 ( 67) PHE173 0 0 0 53 24 0 prot.sequence vpqnwfpifnperplkiplqrnvipsvTrvlQqtmtkqqvflLerWkqrmilelgedgFkeyTsnVFlqgkrfhealesilspqenllksgyiesvqhilkdvsgvralesavqhetlnyiglldcvaeyqgklcvidwktsekpkpfiqstfdnplqvvaymgamnhdtnysfqvqcglivvaykdgspahphfmdaelcsqywtkwllrleeytekkk >6a2h_A: title=ARCHITECTURAL ROLES OF CREN7 IN FOLDING CRENARCHAEAL CHROMATIN FILAMENT organism=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) / Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) DNA sequence DG(B106):DC(C119) DT(B107):DA(C118) DA(B108):DT(C117) DA(B109):DT(C116) DT(B110):DA(C115) DT(B111):DA(C114) chainA ( 23) TRP26 0 0 0 8 5 0 ( 25) LEU28 0 0 22 16 0 0 ( 27) PRO30 0 3 4 0 0 0 ( 30) ARG33 13 9 0 0 0 0 ( 33) VAL36 0 0 1 0 0 0 ( 35) ILE38 0 0 0 4 0 0 ( 48) ARG51 0 0 0 3 8 4 prot.sequence gkkpvkvktpagkeaelvpekvWaLaPkgRkgVkIglfkdpetgkyfRhklpddypi >6a2i_AB: title=ARCHITECTURAL ROLES OF CREN7 IN FOLDING CRENARCHAEAL CHROMATIN FILAMENT organism=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) / Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) / Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) / Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) DNA sequence DC(D119):DG(C118) DG(D120):DC(C117) DT(D121):DA(C116) DA(D122):DT(C115) DG(D123):DC(C114) DC(D124):DG(C113) DT(D125):DA(C112) DA(D126):DT(C111) DA(D127):DT(C110) DT(D128):DA(C109) DT(D129):DA(C108) DA(D130):DT(C107) DG(D131):DC(C106) DC(D132):DG(C105) DT(D133):DA(C104) DA(D134):DT(C103) DC(D135):DG(C102) DG(D136):DC(C101) chainA ( 22) TRP26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 ( 24) LEU28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 20 0 ( 26) PRO30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 32) VAL36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 34) ILE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 47) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 2 8 9 1 0 0 chainB ( 23) TRP26 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 ( 25) LEU28 0 0 0 0 0 0 0 0 0 17 22 0 0 0 0 0 0 0 ( 27) PRO30 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 ( 30) ARG33 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 ( 33) VAL36 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 35) ILE38 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 48) ARG51 0 0 0 0 0 0 0 5 9 1 0 0 0 0 0 0 0 0 prot.sequence kkpvkvktpagkeaelvpekvWaLaPkgRkgVkIglfkdpetgkyfRhklpddypi/gkkpvkvktpagkeaelvpekvWaLaPkgRkgVkIglfkdpetgkyfRhklpddypi >6a2i_B: title=ARCHITECTURAL ROLES OF CREN7 IN FOLDING CRENARCHAEAL CHROMATIN FILAMENT organism=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) / Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) DNA sequence DC(D119):DG(C118) DG(D120):DC(C117) DT(D121):DA(C116) DA(D122):DT(C115) DG(D123):DC(C114) DC(D124):DG(C113) DT(D125):DA(C112) DA(D126):DT(C111) DA(D127):DT(C110) DT(D128):DA(C109) DT(D129):DA(C108) DA(D130):DT(C107) DG(D131):DC(C106) DC(D132):DG(C105) DT(D133):DA(C104) DA(D134):DT(C103) DC(D135):DG(C102) DG(D136):DC(C101) chainB ( 23) TRP26 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 ( 25) LEU28 0 0 0 0 0 0 0 0 0 17 22 0 0 0 0 0 0 0 ( 27) PRO30 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 ( 30) ARG33 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 ( 33) VAL36 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 35) ILE38 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 48) ARG51 0 0 0 0 0 0 0 5 9 1 0 0 0 0 0 0 0 0 prot.sequence gkkpvkvktpagkeaelvpekvWaLaPkgRkgVkIglfkdpetgkyfRhklpddypi >6a47_B:Ribonuclease_H-like; title=STRUCTURE OF TREX2 IN COMPLEX WITH A Y STRUCTURED DSDNA organism=Mus musculus DNA sequence DA(D5):DT(D22) DG(D6):DC(D21) DG(D7):DC(D20) DC(D8):DG(D19) DC(D9):DG(D18) DC(D10):DG(D17) DT(D11):DA(D16) chainB ( 16) LEU20 13 0 0 0 0 0 0 ( 17) PRO21 16 0 0 0 0 0 0 ( 18) ASN22 4 0 0 0 0 0 0 (114) ASN118 3 5 0 0 0 0 0 (117) ASP121 0 6 3 0 0 0 0 (118) TYR122 6 0 0 0 0 0 0 prot.sequence praetfvfldleatgLPNmdpeiaeislfavhrsslenperddsgslvlprvldkltlcmcperpftakaseitglsseslmhcgkagfngavvrtlqgflsrqegpiclvahNgfDYdfpllctelqrlgahlpqdtvcldtlpalRgldrahsgrksyslaslfhryfqaepssaegdvhtllliflhrapellawadeqarswahiepmyvppd >6a4b_E:Ribonuclease_H-like; title=STRUCTURE OF TREX2 IN COMPLEX WITH A DUPLEX DNA WITH 2 NUCLEOTIDE 3'- OVERHANG organism=Mus musculus DNA sequence DG(K1):DC(K16) DG(K2):DC(K15) DC(K3):DG(K14) DC(K4):DG(K13) DC(K5):DG(K12) chainE (114) ASN118 5 0 0 0 0 (117) ASP121 5 0 0 0 0 (156) ARG167 0 0 0 0 1 prot.sequence praetfvfldleatglpnmdpeiaeislfavhrsslenperddsgslvlprvldkltlcmcperpftakaseitglsseslmhcgkagfngavvrtlqgflsrqegpiclvahNgfDydfpllctelqrlgahlpqdtvcldtlpalrgldrahsRksyslaslfhryfqaepsaahsaegdvhtllliflhrapellawadeqarswahiepmyvp >6a57_A:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF HISTONE DEMETHYLASE REF6 COMPLEXED WITH DNA organism=Arabidopsis thaliana DNA sequence DG(C22):DC(B16) DA(C23):DT(B15) DC(C24):DG(B14) DA(C25):DT(B13) DA(C26):DT(B12) DA(C27):DT(B11) DA(C28):DT(B10) DC(C29):DG(B9) DA(C30):DT(B8) DG(C31):DC(B7) DA(C32):DT(B6) DG(C33):DC(B5) DA(C34):DT(B4) DA(C35):DT(B3) DA(C36):DT(B2) chainA ( 58) TYR1282 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 ( 85) TRP1309 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 87) TRP1311 0 0 0 0 0 0 8 15 8 1 0 0 0 0 0 ( 88) SER1312 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 91) GLU1315 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (115) PHE1339 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 (116) VAL1340 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 (117) SER1341 0 0 0 0 0 0 0 0 1 10 7 0 0 0 0 (118) ASP1342 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 (120) SER1344 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (121) ARG1345 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 prot.sequence ekeeeeeeeeneeeecaayqcnmegctmsfssekqlmlhkrnicpikgcgknffshkYlvqhqrvhsddrplkcpwkgckmtfkwawsrtEhirvhtgarpyvcaepdcgqtfrFvSDfsrhkrktghsvk >6a5l_e:Histone-fold; title=RNA POLYMERASE II ELONGATION COMPLEX STALLED AT SHL(-1) OF THE NUCLEOSOME, WITH FOREIGN DNA organism=HOMO SAPIENS DNA sequence DA(T-72):DT(N72) DT(T-71):DA(N71) DC(T-70):DG(N70) DA(T-69):DT(N69) DG(T-68):DC(N68) DA(T-67):DT(N67) DA(T-66):DT(N66) DT(T-65):DA(N65) DC(T-64):DG(N64) DC(T-63):DG(N63) DC(T-62):DG(N62) DG(T-61):DC(N61) DG(T-60):DC(N60) DT(T-59):DA(N59) DG(T-58):DC(N58) DC(T-57):DG(N57) DC(T-56):DG(N56) DG(T-55):DC(N55) DA(T-54):DT(N54) DG(T-53):DC(N53) DG(T-52):DC(N52) DC(T-51):DG(N51) DC(T-50):DG(N50) DG(T-49):DC(N49) DC(T-48):DG(N48) DT(T-47):DA(N47) DC(T-46):DG(N46) DA(T-45):DT(N45) DA(T-44):DT(N44) DT(T-43):DA(N43) DT(T-42):DA(N42) DG(T-41):DC(N41) DG(T-40):DC(N40) DT(T-39):DA(N39) DC(T-38):DG(N38) DG(T-37):DC(N37) DT(T-36):DA(N36) DA(T-35):DT(N35) DG(T-34):DC(N34) DA(T-33):DT(N33) DC(T-32):DG(N32) DA(T-31):DT(N31) DG(T-30):DC(N30) DC(T-29):DG(N29) DT(T-28):DA(N28) DC(T-27):DG(N27) DT(T-26):DA(N26) DA(T-25):DT(N25) DG(T-24):DC(N24) DC(T-23):DG(N23) DA(T-22):DT(N22) DC(T-21):DG(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DT(T-17):DA(N17) DT(T-16):DA(N16) DA(T-15):DT(N15) DA(T-14):DT(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DG(T-11):DC(N11) DC(T-10):DG(N10) DA(T-9):DT(N9) DC(T-8):DG(N8) DG(T-7):DC(N7) DT(T-6):DA(N6) DA(T-5):DT(N5) DC(T-4):DG(N4) DG(T-3):DC(N3) DC(T-2):DG(N2) DG(T-1):DC(N1) DC(T0):DG(N0) DT(T1):DA(N-1) DG(T2):DC(N-2) DT(T3):DA(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DC(T7):DG(N-7) DC(T8):DG(N-8) DG(T9):DC(N-9) DC(T10):DG(N-10) DG(T11):DC(N-11) DT(T12):DA(N-12) DT(T13):DA(N-13) DT(T14):DA(N-14) DT(T15):DA(N-15) DA(T16):DT(N-16) DA(T17):DT(N-17) DC(T18):DG(N-18) DC(T19):DG(N-19) DG(T20):DC(N-20) DC(T21):DG(N-21) DC(T22):DG(N-22) DA(T23):DT(N-23) DA(T24):DT(N-24) DG(T25):DC(N-25) DG(T26):DC(N-26) DG(T27):DC(N-27) DG(T28):DC(N-28) DA(T29):DT(N-29) DT(T31):DA(N-31) DA(T32):DT(N-32) DC(T33):DG(N-42) DA(T34):DT(N-43) DC(T35):DG(N-44) DC(T36):DG(N-45) DC(T37):DT(N-46) DA(T38):DC(N-47) DA(T39):DC(N-48) DG(T40):DG(N-49) DA(T41):DT(N-50) DC(T42):DG(N-51) DA(T43):DC(N-52) DC(T44):DT(N-53) chaine ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera >6a5l_gh:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=RNA POLYMERASE II ELONGATION COMPLEX STALLED AT SHL(-1) OF THE NUCLEOSOME, WITH FOREIGN DNA organism=HOMO SAPIENS DNA sequence DG(1-66):DC(066) DT(1-65):DA(065) DT(1-64):DA(064) DT(1-63):DA(063) DT(1-62):DA(062) DT(1-61):DA(061) DT(1-59):DA(060) DC(1-58):DG(058) DT(1-57):DA(057) DG(1-56):DC(056) DT(1-55):DA(055) DC(1-54):DG(054) DT(1-53):DA(053) DC(1-52):DG(052) DG(1-51):DC(051) DT(1-50):DA(050) DG(1-49):DC(049) DC(1-48):DG(048) DC(1-47):DG(047) DT(1-46):DA(046) DG(1-45):DC(045) DG(1-44):DC(044) DT(1-43):DA(043) DG(1-42):DC(042) DT(1-41):DA(041) DC(1-40):DG(040) DT(1-39):DA(039) DT(1-38):DA(038) DG(1-37):DC(037) DG(1-36):DC(036) DG(1-35):DC(035) DT(1-34):DA(034) DG(1-33):DC(033) DT(1-32):DA(032) DA(1-31):DT(031) DA(1-30):DT(030) DT(1-29):DA(029) DC(1-28):DG(028) DC(1-27):DG(027) DC(1-26):DG(026) DC(1-25):DG(025) chaing ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainh prot.sequence aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtAvrlllpgelakhavsegtkavtkytsa >6a5n_A:SET_domain;PUA_domain-like; title=CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA SUVH6 IN COMPLEX WITH METHYLATED DNA organism=Arabidopsis thaliana DNA sequence DA(C2):DT(D14) DG(C3):DC(D13) DT(C4):DA(D12) DA(C5):DT(D11) DC(C6):DG(D10) DT(C7):DA(D9) 5CM(C8):DG(D8) DA(C9):DT(D7) DG(C10):DC(D6) DC(C11):DG(D5) DA(C12):DT(D4) DG(C13):DC(D3) DT(C14):DA(D2) chainA ( 41) ARG306 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 91) SER356 0 0 0 0 0 14 0 0 0 0 0 0 0 ( 92) GLN357 0 0 0 0 0 28 11 24 0 0 0 0 0 (112) SER377 0 0 0 0 0 0 3 0 0 0 0 0 0 (115) TYR380 0 0 0 0 0 0 20 0 0 0 0 0 0 (117) ASP382 0 0 0 0 0 0 11 0 0 0 0 0 0 (127) TYR392 0 0 0 0 0 0 27 0 0 0 0 0 0 (128) THR393 0 0 0 0 0 0 1 0 0 0 0 0 0 (130) GLN395 0 0 0 0 0 0 1 0 0 0 0 0 0 (166) THR444 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence gdssrnkvketlrlfhgvcrkilqedeakpedqrrkgkglRidfeastilkrngkflnsgvhilgevpgvevgdefqyrmelnilgihkpSQagidymkygkakvatsivasggyddhldnsdvltytgqggnpedqklitgnlalatsiekqtpvrvirgkhksThdkskggnyvydglylvekywqqvgshgmnvfkfqlrripgqpelswvevkkskskyreglckldisegkeqspisavneiddekpplftytvkliypdwcrpvppkscccttrcteaearvcacveknggeipynfdgaivgakptiyecgplckcpsscylrvtqhgiklpleifktksrgwgvrclksipigsficeyvgelledseaerrigndeylfdignrydnslaqgmselmlgtqagrsmaegdessgftidaaskgnvgrfinhscspnlyaqnvlydhedsriphvmffaqdnipplqelcydynyaldqvrdskgnikqklcfc >6a5o_f:Histone-fold; title=RNA POLYMERASE II ELONGATION COMPLEX STALLED AT SHL(-6) OF THE NUCLEOSOME organism=? DNA sequence DA(T-72):DT(N72) DT(T-71):DA(N71) DC(T-70):DG(N70) DA(T-69):DT(N69) DG(T-68):DC(N68) DA(T-67):DT(N67) DA(T-66):DT(N66) DT(T-65):DA(N65) DC(T-64):DG(N64) DC(T-63):DG(N63) DC(T-62):DG(N62) DG(T-61):DC(N61) DG(T-60):DC(N60) DT(T-59):DA(N59) DG(T-58):DC(N58) DC(T-57):DG(N57) DC(T-56):DG(N56) DG(T-55):DC(N55) DA(T-54):DT(N54) DG(T-53):DC(N53) DG(T-52):DC(N52) DC(T-51):DG(N51) DC(T-50):DG(N50) DG(T-49):DC(N49) DC(T-48):DG(N48) DT(T-47):DA(N47) DC(T-46):DG(N46) DA(T-45):DT(N45) DA(T-44):DT(N44) DT(T-43):DA(N43) DT(T-42):DA(N42) DG(T-41):DC(N41) DG(T-40):DC(N40) DT(T-39):DA(N39) DC(T-38):DG(N38) DG(T-37):DC(N37) DT(T-36):DA(N36) DA(T-35):DT(N35) DG(T-34):DC(N34) DA(T-33):DT(N33) DC(T-32):DG(N32) DA(T-31):DT(N31) DG(T-30):DC(N30) DC(T-29):DG(N29) DT(T-28):DA(N28) DC(T-27):DG(N27) DT(T-26):DA(N26) DA(T-25):DT(N25) DG(T-24):DC(N24) DC(T-23):DG(N23) DA(T-22):DT(N22) DC(T-21):DG(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DT(T-17):DA(N17) DT(T-16):DA(N16) DA(T-15):DT(N15) DA(T-14):DT(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DG(T-11):DC(N11) DC(T-10):DG(N10) DA(T-9):DT(N9) DC(T-8):DG(N8) DG(T-7):DC(N7) DT(T-6):DA(N6) DA(T-5):DT(N5) DC(T-4):DG(N4) DG(T-3):DC(N3) DC(T-2):DG(N2) DG(T-1):DC(N1) DC(T0):DG(N0) DT(T1):DA(N-1) DG(T2):DC(N-2) DT(T3):DA(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DC(T7):DG(N-7) DC(T8):DG(N-8) DG(T9):DC(N-9) DC(T10):DG(N-10) DG(T11):DC(N-11) DT(T12):DA(N-12) DT(T13):DA(N-13) DT(T14):DA(N-14) DT(T15):DA(N-15) DA(T16):DT(N-16) DA(T17):DT(N-17) DC(T18):DG(N-18) DC(T19):DG(N-19) DG(T20):DC(N-20) DC(T21):DG(N-21) DC(T22):DG(N-22) DA(T23):DT(N-23) DA(T24):DT(N-24) DG(T25):DC(N-25) DG(T26):DC(N-26) DG(T27):DC(N-27) DG(T28):DC(N-28) DA(T29):DT(N-29) DT(T30):DA(N-30) DT(T31):DA(N-31) DA(T32):DT(N-32) DC(T33):DG(N-33) DA(T34):DT(N-34) DC(T35):DG(N-35) DC(T36):DG(N-36) DC(T37):DG(N-37) DA(T38):DT(N-38) DA(T39):DT(N-39) DG(T40):DC(N-40) DA(T41):DT(N-41) DC(T42):DG(N-42) DA(T43):DT(N-43) DC(T44):DG(N-44) DC(T45):DG(N-45) DA(T46):DT(N-46) DG(T47):DC(N-47) DG(T48):DC(N-48) DC(T49):DG(N-49) DA(T50):DT(N-50) DC(T51):DG(N-51) DG(T52):DC(N-52) DA(T53):DT(N-53) DG(T54):DC(N-54) DA(T55):DT(N-55) DC(T56):DG(N-56) DA(T57):DT(N-57) DG(T58):DC(N-58) DA(T59):DT(N-59) DA(T60):DT(N-60) DA(T61):DT(N-61) DA(T62):DT(N-62) DA(T63):DT(N-63) DA(T64):DT(N-64) DA(T65):DT(N-65) DC(T66):DG(N-66) DA(T67):DT(N-67) DA(T68):DT(N-68) DC(T69):DG(N-69) DG(T70):DC(N-70) DA(T71):DT(N-71) DA(T72):DT(N-72) DA(T73):DT(N-73) DA(T74):DT(N-74) DC(T75):DG(N-75) DG(T76):DC(N-76) DC(T78):DG(N-78) DC(T79):DG(N-79) DA(T80):DT(N-80) DC(T81):DG(N-81) DC(T82):DG(N-82) DA(T83):DT(N-83) DC(T84):DG(N-84) DC(T85):DG(N-94) DC(T86):DG(N-95) DA(T87):DT(N-96) DA(T88):DT(N-97) DA(T89):DT(N-98) DC(T90):DG(N-99) DA(T91):DT(N-100) DC(T92):DG(N-101) DA(T93):DT(N-102) DC(T94):DT(N-103) DC(T95):DT(N-104) DA(T96):DC(N-105) chainf ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >6a5r_f:Histone-fold; title=RNA POLYMERASE II ELONGATION COMPLEX STALLED AT SHL(-2) OF THE NUCLEOSOME organism=? DNA sequence DT(N-63):DG(T54) DT(N-62):DA(T53) DT(N-61):DG(T52) DT(N-60):DC(T51) DT(N-59):DA(T50) DC(N-58):DC(T49) DT(N-57):DG(T48) DG(N-56):DG(T47) DT(N-55):DA(T46) DC(N-54):DC(T45) DC(N-53):DC(T44) DG(N-52):DA(T43) DG(N-42):DC(T42) DT(N-41):DA(T41) DC(N-40):DG(T40) DT(N-38):DA(T38) DG(N-37):DC(T37) DG(N-36):DC(T36) DG(N-35):DC(T35) DT(N-34):DA(T34) DG(N-33):DC(T33) DT(N-32):DA(T32) DA(N-31):DT(T31) DA(N-30):DT(T30) DT(N-29):DA(T29) DC(N-28):DG(T28) DC(N-27):DG(T27) DC(N-26):DG(T26) DC(N-25):DG(T25) DT(N-24):DA(T24) DT(N-23):DA(T23) DG(N-22):DC(T22) DG(N-21):DC(T21) DC(N-20):DG(T20) DG(N-19):DC(T19) DG(N-18):DC(T18) DT(N-17):DA(T17) DT(N-16):DA(T16) DA(N-15):DT(T15) DA(N-14):DT(T14) DA(N-13):DT(T13) DA(N-12):DT(T12) DC(N-11):DG(T11) DG(N-10):DC(T10) DC(N-9):DG(T9) DG(N-8):DC(T8) DG(N-7):DC(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DA(N-3):DT(T3) DC(N-2):DG(T2) DA(N-1):DT(T1) DG(N0):DC(T0) DC(N1):DG(T-1) DG(N2):DC(T-2) DC(N3):DG(T-3) DG(N4):DC(T-4) DT(N5):DA(T-5) DA(N6):DT(T-6) DC(N7):DG(T-7) DG(N8):DC(T-8) DT(N9):DA(T-9) DG(N10):DC(T-10) DC(N11):DG(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DT(N14):DA(T-14) DT(N15):DA(T-15) DA(N16):DT(T-16) DA(N17):DT(T-17) DG(N18):DC(T-18) DC(N19):DG(T-19) DG(N20):DC(T-20) DG(N21):DC(T-21) DT(N22):DA(T-22) DG(N23):DC(T-23) DC(N24):DG(T-24) DT(N25):DA(T-25) DA(N26):DT(T-26) DG(N27):DC(T-27) DA(N28):DT(T-28) DG(N29):DC(T-29) DC(N30):DG(T-30) DT(N31):DA(T-31) DG(N32):DC(T-32) DT(N33):DA(T-33) DC(N34):DG(T-34) DT(N35):DA(T-35) DA(N36):DT(T-36) DC(N37):DG(T-37) DG(N38):DC(T-38) DA(N39):DT(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DA(N42):DT(T-42) DA(N43):DT(T-43) DT(N44):DA(T-44) DT(N45):DA(T-45) DG(N46):DC(T-46) DA(N47):DT(T-47) DG(N48):DC(T-48) DC(N49):DG(T-49) DG(N50):DC(T-50) DG(N51):DC(T-51) DC(N52):DG(T-52) DC(N53):DG(T-53) DT(N54):DA(T-54) DC(N55):DG(T-55) DG(N56):DC(T-56) DG(N57):DC(T-57) DC(N58):DG(T-58) DA(N59):DT(T-59) DC(N60):DG(T-60) DC(N61):DG(T-61) DG(N62):DC(T-62) DG(N63):DC(T-63) DG(N64):DC(T-64) DA(N65):DT(T-65) DT(N66):DA(T-66) DT(N67):DA(T-67) DC(N68):DG(T-68) DT(N69):DA(T-69) DG(N70):DC(T-70) DA(N71):DT(T-71) DT(N72):DA(T-72) chainf ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >6a5u_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX STALLED AT SHL(-1) OF THE NUCLEOSOME, WITH FOREIGN DNA, TILT CONFORMATION organism=? DNA sequence DT(N-53):DC(T44) DC(N-52):DA(T43) DG(N-51):DC(T42) DT(N-50):DA(T41) DG(N-49):DG(T40) DC(N-48):DA(T39) DC(N-47):DA(T38) DT(N-46):DC(T37) DG(N-45):DC(T36) DG(N-44):DC(T35) DT(N-43):DA(T34) DG(N-42):DC(T33) DT(N-32):DA(T32) DA(N-31):DT(T31) DT(N-29):DA(T29) DC(N-28):DG(T28) DC(N-27):DG(T27) DC(N-26):DG(T26) DC(N-25):DG(T25) DT(N-24):DA(T24) DT(N-23):DA(T23) DG(N-22):DC(T22) DG(N-21):DC(T21) DC(N-20):DG(T20) DG(N-19):DC(T19) DG(N-18):DC(T18) DT(N-17):DA(T17) DT(N-16):DA(T16) DA(N-14):DT(T14) DA(N-13):DT(T13) DA(N-12):DT(T12) DC(N-11):DG(T11) DG(N-10):DC(T10) DC(N-9):DG(T9) DG(N-8):DC(T8) DG(N-7):DC(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DA(N-3):DT(T3) DC(N-2):DG(T2) DA(N-1):DT(T1) DG(N0):DC(T0) DC(N1):DG(T-1) DG(N2):DC(T-2) DC(N3):DG(T-3) DG(N4):DC(T-4) DT(N5):DA(T-5) DA(N6):DT(T-6) DC(N7):DG(T-7) DG(N8):DC(T-8) DT(N9):DA(T-9) DG(N10):DC(T-10) DC(N11):DG(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DT(N14):DA(T-14) DT(N15):DA(T-15) DA(N16):DT(T-16) DA(N17):DT(T-17) DG(N18):DC(T-18) DC(N19):DG(T-19) DG(N20):DC(T-20) DG(N21):DC(T-21) DT(N22):DA(T-22) DG(N23):DC(T-23) DC(N24):DG(T-24) DT(N25):DA(T-25) DA(N26):DT(T-26) DG(N27):DC(T-27) DA(N28):DT(T-28) DG(N29):DC(T-29) DC(N30):DG(T-30) DT(N31):DA(T-31) DG(N32):DC(T-32) DT(N33):DA(T-33) DC(N34):DG(T-34) DT(N35):DA(T-35) DA(N36):DT(T-36) DC(N37):DG(T-37) DG(N38):DC(T-38) DA(N39):DT(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DA(N42):DT(T-42) DA(N43):DT(T-43) DT(N44):DA(T-44) DT(N45):DA(T-45) DG(N46):DC(T-46) DA(N47):DT(T-47) DG(N48):DC(T-48) DC(N49):DG(T-49) DG(N50):DC(T-50) DG(N51):DC(T-51) DC(N52):DG(T-52) DC(N53):DG(T-53) DT(N54):DA(T-54) DC(N55):DG(T-55) DG(N56):DC(T-56) DG(N57):DC(T-57) DC(N58):DG(T-58) DA(N59):DT(T-59) DC(N60):DG(T-60) DC(N61):DG(T-61) DG(N62):DC(T-62) DG(N63):DC(T-63) DG(N64):DC(T-64) DA(N65):DT(T-65) DT(N66):DA(T-66) DT(N67):DA(T-67) DC(N68):DG(T-68) DT(N69):DA(T-69) DG(N70):DC(T-70) DA(N71):DT(T-71) DT(N72):DA(T-72) chainB (431) LYS463 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (432) LYS464 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) LYS500 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) GLN524 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ddtittedcwtvisaffeekglvsqqldsfdefmetsiqdlvweeprlildqpaqhtnekdninkryeirfgkiylsrptmteadgtthamfpqearlrnltysspvyldmeksmftsidgnkvhigkvpimlrskfcslrtldevdlykmkecpydmggyfvingsekvliaqersaanivqvfkkaapspishvaeirsalekgsrlistmqiklygredkgtgrtikatlpyvkqdipivivfralgvvpdgeilqhicydendwqmlemlkpcieegfviqdkevaldfigrrgsaalgirrekriqyakdilqkellphitqeegfetrktfflgymvnrlllcalerkdqddrdhfgkkrldlagpllanlfrilfrkltreiyrymqrcietdrdfnlnlavksttitsglkyslatgnwgeqKKamssragvsqvlnrytysstlshlrrtntpigrdgKlakprqlhnthwglvcpaetpegQacglvknlsllsgisigspsepiinfleewgmepledydpaqhtkstrifvngvwtgihrdpsmlvstmrdlrrsgaispevsiirdirerefkiftdvgrvyrplfiveddeskdnkgelritkehirkiqqgydddvygwsslvtsgvieyvdgeeeetimiamtpedlqtrslndtakrikpemstsshhtfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplaktqameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekrfgisiveefekptrattlrlkhgtyekldedgliapgvrvsgddiiigkttpippyhtkrdastplrstengivdqvllttnqeglkfvkvrmrttkvpqigdkfasrhgqkgtigvtyrhedmpfsaegivpdliinphaipsrmtvahliecllskvgsirgyegdatpftdltvdavsnllrdngyqsrgfevmynghtgkklmaqvffgptyyqrlrhmvddkiharargpvqvltrqpvegrsrdgglrfgemerdcmiahgaagflkerlmeasdafrvhvcgicglmsvianlkknqfecrscknktniyqlhipyaakllfqelmamniaprlytersg >6a5u_gh:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=RNA POLYMERASE II ELONGATION COMPLEX STALLED AT SHL(-1) OF THE NUCLEOSOME, WITH FOREIGN DNA, TILT CONFORMATION organism=HOMO SAPIENS DNA sequence DG(027):DC(1-27) DG(028):DC(1-28) DA(029):DT(1-29) DT(030):DA(1-30) DT(031):DA(1-31) DA(032):DT(1-32) DC(033):DG(1-33) DA(034):DT(1-34) DC(035):DG(1-35) DC(036):DG(1-36) DC(037):DG(1-37) DA(038):DT(1-38) DA(039):DT(1-39) DG(040):DC(1-40) DA(041):DT(1-41) DC(042):DG(1-42) DA(043):DT(1-43) DC(044):DG(1-44) DC(045):DG(1-45) DA(046):DT(1-46) DG(047):DC(1-47) DG(048):DC(1-48) DC(049):DG(1-49) DA(050):DT(1-50) DC(051):DG(1-51) DG(052):DC(1-52) DA(053):DT(1-53) DG(054):DC(1-54) DA(055):DT(1-55) DC(056):DG(1-56) DA(057):DT(1-57) DG(058):DC(1-58) DA(060):DT(1-59) DA(061):DT(1-61) DA(062):DT(1-62) DA(063):DT(1-63) DA(064):DT(1-64) DA(065):DT(1-65) DC(066):DG(1-66) chaing ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 chainh prot.sequence aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtAvrlllpgelakhavsegtkavtkytsa >6a8r_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF DUX4 HD2 DOMAIN ASSOCIATED WITH ERG DNA BINDING SITE organism=Homo sapiens DNA sequence DA(F6):DT(E15) DA(F7):DT(E14) DT(F8):DA(E13) DC(F9):DG(E12) DT(F10):DA(E11) DC(F11):DG(E10) DA(F12):DT(E9) DT(F13):DA(E8) DC(F14):DG(E7) DA(F15):DT(E6) chainA ( 1) ARG2 0 0 0 0 0 0 1 4 8 0 ( 4) ARG5 0 0 0 0 0 0 0 0 7 7 ( 46) ILE47 0 0 0 0 0 0 3 2 0 0 ( 49) GLN50 0 0 0 0 4 2 1 0 0 0 ( 50) ASN51 0 0 0 0 0 0 2 10 4 0 ( 53) ALA54 0 0 0 0 0 2 0 0 0 0 ( 54) ARG55 0 0 0 0 0 0 0 7 13 13 prot.sequence RrkRtavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrrARhpgq >6aeb_F: title=CRYSTAL STRUCTURE OF XCAS9 IN COMPLEX WITH SGRNA AND TARGET DNA (AAG PAM) organism=Streptococcus pyogenes DNA sequence DC(G1):DG(H11) DA(G2):DT(H10) DA(G3):DT(H9) DT(G4):DA(H8) DA(G5):DT(H7) DC(G6):DG(H6) DT(G7):DA(H5) DT(G8):DA(H4) chainF (1068) LYS1107 0 0 0 0 0 0 4 4 (1289) ARG1333 0 0 0 0 0 0 5 3 (1291) ARG1335 0 0 0 1 4 11 9 0 prot.sequence kysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedtklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmiklydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngiiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfekvvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgdqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfiqlihddsltfkediqkaqslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagvlqkgnelalpskyvnflylashyepedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >6aeg_B: title=CRYSTAL STRUCTURE OF XCAS9 IN COMPLEX WITH SGRNA AND TARGET DNA (GAT PAM) organism=Streptococcus pyogenes DNA sequence DG(D4):DC(C8) DA(D5):DT(C7) DT(D6):DA(C6) DT(D7):DA(C5) DA(D8):DT(C4) DT(D9):DA(C3) DT(D10):DA(C2) DG(D11):DC(C1) chainB (1068) LYS1107 6 6 0 0 0 0 0 0 (1289) ARG1333 4 1 0 0 0 0 0 0 (1291) ARG1335 0 5 8 1 0 0 0 0 prot.sequence kysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedtklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmiklydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngiiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfekvvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgdqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfiqlihddsltfkediqkaqslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagvlqkgnelalpskyvnflylashyepedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >6ai6_A: title=CRYSTAL STRUCTURE OF SPCAS9-NG organism=Streptococcus pyogenes serotype M1 DNA sequence DC(C1):DG(D12) DA(C2):DT(D11) DA(C3):DT(D10) DT(C4):DA(D9) DA(C5):DT(D8) DC(C6):DG(D7) DC(C7):DG(D6) DA(C8):DT(D5) chainA (1070) LYS1107 0 0 0 0 0 0 3 5 (1182) PHE1219 0 0 0 0 0 0 6 0 (1289) ARG1333 0 0 0 0 0 2 10 12 (1291) VAL1335 0 0 0 1 0 0 0 0 (1293) ARG1337 0 0 0 7 11 10 0 0 prot.sequence kkysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarnsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdhivpqsflkddsidnkvltrsdkargksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesirpkrnsdkliarkkdwdpkkyggfvsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasarFlqkgnelalpskyvnflylashyedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgaprafkyfdttidRkVyRstkevldatlihqsitglyetridlsqlg >6ako_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FOXC2 DBD BOUND TO DBE2 DNA organism=HOMO SAPIENS DNA sequence DT(B1):DA(A16) DC(B2):DG(A15) DT(B3):DA(A14) DT(B4):DA(A13) DG(B5):DC(A12) DT(B6):DA(A11) DT(B7):DA(A10) DT(B8):DA(A9) DA(B9):DT(A8) DC(B10):DG(A7) DA(B11):DT(A6) DT(B12):DA(A5) DT(B13):DA(A4) DT(B14):DA(A3) DT(B15):DA(A2) DG(B16):DC(A1) chainC ( 49) ASN118 0 0 0 0 0 1 13 4 0 0 0 0 0 0 0 0 ( 50) SER119 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 52) ARG121 0 0 0 8 9 1 0 0 0 0 0 0 0 0 0 0 ( 53) HIS122 0 0 0 0 0 0 15 15 9 0 0 0 0 0 0 0 ( 56) SER125 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 ( 57) LEU126 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence gpkppysyialitmaiqnapekkitlngiyqfimdrfpfyrenkqgwqNSiRHnlSLnecfvkvprddkkpgkgsywtldpdsynmfengsflrrrr >6akp_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURAL OF FOXC2 DNA BINDING DOMAIN BOUND TO PC PROMOTER organism=HOMO SAPIENS DNA sequence DA(B9):DT(A24) DC(B10):DG(A23) DA(B11):DT(A22) DC(B12):DG(A21) DA(B13):DT(A20) DA(B14):DT(A19) DA(B15):DT(A18) DT(B16):DA(A17) DA(B17):DT(A16) DT(B18):DA(A15) DT(B19):DA(A14) DT(B20):DA(A13) DG(B21):DC(A12) DT(B22):DA(A11) DG(B23):DC(A10) DT(B24):DA(A9) chainC ( 52) ARG121 0 0 0 0 0 0 0 0 0 0 0 12 13 1 0 0 ( 53) HIS122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 ( 56) SER125 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 prot.sequence gpkppysyialitmaiqnapekkitlngiyqfimdrfpfyrenkqgwqnsiRHnlSlnecfvkvprdkgsywtldpdsynmfengsflrrrrrf >6alf_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF CROSSLINKED E.COLI RNA POLYMERASE ELONGATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(B1):DC(A29) DG(B2):DC(A28) DG(B3):DC(A27) DT(B4):DA(A26) DA(B5):DT(A25) DT(B6):DA(A24) DT(B7):DA(A23) DC(B8):DG(A22) DG(B9):DC(A21) DC(B10):DG(A20) DC(B11):DG(A19) DG(B12):DC(A18) DT(B13):DA(A17) DG(B14):DG(A16) DT(B15):DT(A15) DA(B16):DA(A14) DC(B17):DA(A6) DC(B18):DT(A5) DT(B19):DC(A4) DC(B20):DG(A3) DT(B21):DG(A2) DC(B22):DG(A1) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (566) PRO567 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegPniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >6alf_IJ: title=CRYOEM STRUCTURE OF CROSSLINKED E.COLI RNA POLYMERASE ELONGATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(B1):DC(A29) DG(B2):DC(A28) DG(B3):DC(A27) DT(B4):DA(A26) DA(B5):DT(A25) DT(B6):DA(A24) DT(B7):DA(A23) DC(B8):DG(A22) DG(B9):DC(A21) DC(B10):DG(A20) DC(B11):DG(A19) DG(B12):DC(A18) DT(B13):DA(A17) DG(B14):DG(A16) DT(B15):DT(A15) DA(B16):DA(A14) DC(B17):DA(A6) DC(B18):DT(A5) DT(B19):DC(A4) DC(B20):DG(A3) DT(B21):DG(A2) DC(B22):DG(A1) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (566) PRO567 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainJ ( 31) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegPniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6alg_IJN: title=CRYOEM STRUCTURE OF HK022 NUN - E.COLI RNA POLYMERASE ELONGATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA PHAGE HK022 / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(B1):DC(A29) DG(B2):DC(A28) DG(B3):DC(A27) DT(B4):DA(A26) DA(B5):DT(A25) DT(B6):DA(A24) DT(B7):DA(A23) DC(B8):DG(A22) DG(B9):DC(A21) DC(B10):DG(A20) DC(B11):DG(A19) DG(B12):DC(A18) DT(B13):DA(A17) DG(B14):DG(A16) DT(B15):DT(A15) DA(B16):DA(A14) DC(B17):DC(A13) DC(B18):DC(A12) DT(B19):DT(A11) DC(B20):DC(A10) DT(B21):DT(A9) DC(B22):DC(A8) DC(B23):DC(A7) DT(B24):DA(A6) DA(B25):DT(A5) DG(B26):DC(A4) DC(B27):DG(A3) DC(B28):DG(A2) DC(B29):DG(A1) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 1 0 0 0 0 0 0 0 0 0 0 0 (369) MET370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (197) THR212 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (260) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (266) ARG281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (283) MET298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (301) ILE316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (306) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 3) GLU89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 7) HIS93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 ( 8) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 ( 10) VAL96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 14) HIS100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmMrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggRfatsdlndlyrRvinRnnrlkRlldlaapdiivrnekrMlqeavdalldngrrgRaItgsnKrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/kyEdvmHRvVnhaHqrnpnkkws >6alg_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF HK022 NUN - E.COLI RNA POLYMERASE ELONGATION COMPLEX organism=? DNA sequence DG(B1):DC(A29) DG(B2):DC(A28) DG(B3):DC(A27) DT(B4):DA(A26) DA(B5):DT(A25) DT(B6):DA(A24) DT(B7):DA(A23) DC(B8):DG(A22) DG(B9):DC(A21) DC(B10):DG(A20) DC(B11):DG(A19) DG(B12):DC(A18) DT(B13):DA(A17) DG(B14):DG(A16) DT(B15):DT(A15) DA(B16):DA(A14) DC(B17):DC(A13) DC(B18):DC(A12) DT(B19):DT(A11) DC(B20):DC(A10) DT(B21):DT(A9) DC(B22):DC(A8) DC(B23):DC(A7) DT(B24):DA(A6) DA(B25):DT(A5) DG(B26):DC(A4) DC(B27):DG(A3) DC(B28):DG(A2) DC(B29):DG(A1) chainJ (197) THR212 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (260) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (266) ARG281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (283) MET298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (301) ILE316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (306) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggRfatsdlndlyrRvinRnnrlkRlldlaapdiivrnekrMlqeavdalldngrrgRaItgsnKrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6alh_IJ: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(B1):DC(A29) DG(B2):DC(A28) DG(B3):DC(A27) DT(B4):DA(A26) DA(B5):DT(A25) DT(B6):DA(A24) DT(B7):DA(A23) DC(B8):DG(A22) DG(B9):DC(A21) DC(B10):DG(A20) DC(B11):DG(A19) DG(B12):DC(A18) DT(B13):DA(A17) DG(B14):DG(A16) DT(B15):DT(A15) DA(B16):DA(A14) DC(B17):DA(A6) DC(B18):DT(A5) DT(B19):DC(A4) DC(B20):DG(A3) DT(B21):DG(A2) DC(B22):DG(A1) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 70 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 chainJ ( 31) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6alh_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(A1):DC(B22) DG(A2):DT(B21) DG(A3):DC(B20) DC(A4):DT(B19) DT(A5):DC(B18) DA(A6):DC(B17) DA(A14):DA(B16) DT(A15):DT(B15) DG(A16):DG(B14) DA(A17):DT(B13) DC(A18):DG(B12) DG(A19):DC(B11) DG(A20):DC(B10) DC(A21):DG(B9) DG(A22):DC(B8) DA(A23):DT(B7) DA(A24):DT(B6) DT(A25):DA(B5) DA(A26):DT(B4) DC(A27):DG(B3) DC(A28):DG(B2) DC(A29):DG(B1) chainJ ( 31) TYR46 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6ama_L:Putative_DNA-binding_domain; title=STRUCTURE OF S. COELICOLOR/S. VENEZUELAE BLDC-SMEA-SSFA COMPLEX TO 3.09 ANGSTROM organism=Streptomyces venezuelae DNA sequence DT(N71):DA(R109) DA(N72):DT(R108) DC(N73):DG(R107) DC(N74):DG(R106) DC(N75):DG(R105) DG(N76):DC(R104) DA(N77):DT(R103) DA(N78):DT(R102) DT(N79):DA(R101) DT(N80):DA(R100) DA(N81):DT(R99) DC(N82):DG(R98) DC(N83):DG(R97) DC(N84):DG(R96) DG(N85):DC(R95) DA(N86):DT(R94) DA(N87):DT(R93) DT(N88):DA(R92) DT(N89):DA(R91) DA(N90):DT(R90) DC(N91):DG(R89) DC(N92):DG(R88) DC(N93):DG(R87) DG(N94):DC(R86) DA(N95):DT(R85) DA(N96):DT(R84) DT(N97):DA(R83) DT(N98):DA(R82) DA(N99):DT(R81) DC(N100):DG(R80) DC(N101):DG(R79) DC(N102):DG(R78) DG(N103):DC(R77) DA(N104):DT(R76) DA(N105):DT(R75) DT(N106):DA(R74) DT(N107):DA(R73) DA(N108):DT(R72) DC(N109):DG(R71) DC(N110):DG(R70) DC(N111):DG(R69) DG(N112):DC(R68) DA(N113):DT(R67) DA(N114):DT(R66) DT(N115):DA(R65) DT(N116):DA(R64) DA(N117):DT(R63) DC(N118):DG(R62) DC(N119):DG(R61) DC(N120):DG(R60) DG(N121):DC(R59) DA(N122):DT(R58) DA(N123):DT(R57) DT(N124):DA(R56) DT(N125):DA(R55) DA(N126):DT(R54) DC(N127):DG(R53) DC(N128):DG(R52) DC(N129):DG(R51) DG(N130):DC(R50) DA(N131):DT(R49) DA(N132):DT(R48) DT(N133):DA(R47) DT(N134):DA(R46) DA(N135):DT(R45) DC(N136):DG(R44) DC(N137):DG(R43) DC(N138):DG(R42) DG(N139):DC(R41) DA(N140):DT(R40) DA(N141):DT(R39) DT(N142):DA(R38) DT(N143):DA(R37) DA(N144):DT(R36) DC(N145):DG(R35) DC(N146):DG(R34) DC(N147):DG(R33) DG(N148):DC(R32) DA(N149):DT(R31) DA(N150):DT(R30) DT(N151):DA(R29) DT(N152):DA(R28) DA(N153):DT(R27) DC(N154):DG(R26) DC(N155):DG(R25) DC(N156):DG(R24) DG(N157):DC(R23) DA(N158):DT(R22) DA(N159):DT(R21) DT(N160):DA(R20) DT(N161):DA(R19) DA(N162):DT(R18) DC(N163):DG(R17) DC(N164):DG(R16) DC(N165):DG(R15) DG(N166):DC(R14) DA(N167):DT(R13) DA(N168):DT(R12) DT(N169):DA(R11) chainL ( 16) ASP24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LYS26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) HIS46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eplltpaevatmfrvDpKtvtRwakagkltsirtlggHrryreaevrallagip >6amk_AB:Putative_DNA-binding_domain; title=STRUCTURE OF STREPTOMYCES VENEZUELAE BLDC-WHII OPT COMPLEX organism=Streptomyces venezuelae DNA sequence DC(R9):DG(Z26) DA(R10):DT(Z25) DA(R11):DT(Z24) DT(R12):DA(Z23) DT(R13):DA(Z22) DC(R14):DG(Z21) DG(R15):DC(Z20) DG(R16):DC(Z19) DG(R17):DC(Z18) DT(R18):DA(Z17) DA(R19):DT(Z16) DA(R20):DT(Z15) DT(R21):DA(Z14) DT(R22):DA(Z13) DC(R23):DG(Z12) DG(R24):DC(Z11) DG(R25):DC(Z10) DG(R26):DT(Z9) DC(R27):DG(Z8) DA(R28):DT(Z7) chainA ( 18) LYS26 0 0 0 0 0 0 5 10 7 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG30 0 0 0 0 0 0 0 0 2 8 13 0 0 0 0 0 0 0 0 0 ( 38) HIS46 0 0 4 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 15) ASP24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 17) LYS26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 9 0 0 ( 21) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 12 ( 37) HIS46 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 prot.sequence pplltpaevatmfrvdpKtvtRwakagkltsirtmggHrryreaevralmag/plltpaevatmfrvDpKtvtRwakagkltsirtmggHrryreaevralmag >6amk_B:Putative_DNA-binding_domain; title=STRUCTURE OF STREPTOMYCES VENEZUELAE BLDC-WHII OPT COMPLEX organism=Streptomyces venezuelae DNA sequence DT(Z7):DA(R28) DG(Z8):DC(R27) DT(Z9):DG(R26) DC(Z10):DG(R25) DC(Z11):DG(R24) DG(Z12):DC(R23) DA(Z13):DT(R22) DA(Z14):DT(R21) DT(Z15):DA(R20) DT(Z16):DA(R19) DA(Z17):DT(R18) DC(Z18):DG(R17) DC(Z19):DG(R16) DC(Z20):DG(R15) DG(Z21):DC(R14) DA(Z22):DT(R13) DA(Z23):DT(R12) DT(Z24):DA(R11) DT(Z25):DA(R10) DG(Z26):DC(R9) chainB ( 15) ASP24 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS26 0 0 9 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG30 12 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) HIS46 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence plltpaevatmfrvDpKtvtRwakagkltsirtmggHrryreaevralmag >6amo_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 7.0 organism=? DNA sequence DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtKilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6amo_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 7.0 organism=? DNA sequence DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):DG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 96) ILE94 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN265 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 6 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkAlteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6an2_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 7.5 organism=? DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) chainA ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 (267) ASN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (450) ARG448 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLN475 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs >6an2_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 7.5 organism=? DNA sequence DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN265 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 4 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtKilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsklLrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6an2_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 7.5 organism=? DNA sequence DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):DG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 96) ILE94 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN265 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkAlteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6an8_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 8.0 organism=? DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) chainA ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 (267) ASN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (450) ARG448 0 0 5 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLN475 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsklLrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6an8_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 8.0 organism=? DNA sequence DC(F803):DG(E725) DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) DG(F817):DC(E711) DC(F818):DG(E710) DG(F819):DC(E709) DC(F820):DG(E708) DC(F821):DG(E707) chainC ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 (267) ASN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (450) ARG448 0 0 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLN475 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs >6an8_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 8.0 organism=? DNA sequence DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):DG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 96) ILE94 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN265 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 2 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkAlteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6anq_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 8.5 organism=? DNA sequence DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs >6anq_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 8.5 organism=? DNA sequence DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6anq_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 8.5 organism=? DNA sequence DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):DG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 96) ILE94 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6ar1_A:DNA/RNA_polymerases; title=STRUCTURE OF A THERMOSTABLE GROUP II INTRON REVERSE TRANSCRIPTASE WITH TEMPLATE-PRIMER AND ITS FUNCTIONAL AND EVOLUTIONARY IMPLICATIONS (RT/DUPLEX (NAT)) organism=Geobacillus stearothermophilus DNA sequence DC(B1) DT(B2) DC(B3) DC(B4) DA(B5) DG(B6) DG(B7) DC(B8) DA(B9) DA(B10) DC(B11) chainA (109) PHE110 0 0 0 0 0 0 0 0 0 0 2 (220) TYR221 0 0 0 0 0 0 0 0 0 7 0 prot.sequence allerilardnlitalkrveanqgapgidgvstdqlrdyirahwstihaqllagtyrpapvrrveipkpgggtrqlgiptvvdrliqqailqeltpifdpdfssssfgFrpgrnahdavrqaqgyiqegyryvvdmdlekffdrvnhdilmsrvarkvkdkrvlkliraylqagvmiegvkvqteegtpqggplspllanillddldkelekrglkfcrYaddcniyvkslragqrvkqsiqrflektlklkvneeksavdrpwkraflgfsftperkarirlaprsiqrlkqrirqltnpnwsismperihrvnqyvmgwigyfrlvetpsvlqtiegwirrrlrlcqwlqwkrvrtrirelralglketavmeiantrkgawrttktpqlhqalgktywtaqglksltqryfelr >6ar3_D:DNA/RNA_polymerases; title=STRUCTURE OF A THERMOSTABLE GROUP II INTRON REVERSE TRANSCRIPTASE WITH TEMPLATE-PRIMER AND ITS FUNCTIONAL AND EVOLUTIONARY IMPLICATIONS (RT/DUPLEX (SE-MET)) organism=Geobacillus stearothermophilus DNA sequence DC(E1) DT(E2) DC(E3) DC(E4) DA(E5) DG(E6) DG(E7) DC(E8) DA(E9) DA(E10) DC(E11) chainD (109) PHE110 0 0 0 0 0 0 0 0 0 0 4 (220) TYR221 0 0 0 0 0 0 0 0 0 6 0 prot.sequence allerilardnlitalkrveanqgapgidgvstdqlrdyirahwstihaqllagtyrpapvrrveipkpgggtrqlgiptvvdrliqqailqeltpifdpdfssssfgFrpgrnahdavrqaqgyiqegyryvvdmdlekffdrvnhdilmsrvarkvkdkrvlkliraylqagvmiegvkvqteegtpqggplspllanillddldkelekrglkfcrYaddcniyvkslragqrvkqsiqrflektlklkvneeksavdrpwkraflgfsftperkarirlaprsiqrlkqrirqltnpnwsismperihrvnqyvmgwigyfrlvetpsvlqtiegwirrrlrlcqwlqwkrvrtrirelralglketavmeiantrkgawrttktpqlhqalgktywtaqglksltqryfelrqg >6as7_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE CATALYTIC CORE OF HUMAN DNA POLYMERASE ALPHA IN TERNARY COMPLEX WITH AN DNA-PRIMED DNA TEMPLATE AND DCTP organism=Homo sapiens DNA sequence DG(C111):DC(B11) DC(C112):DG(B10) DG(C113):DC(B9) DC(C114):DG(B8) DT(C115):DA(B7) DC(C116):DG(B6) DC(C117):DG(B5) DA(C118):DT(B4) DG(C119):DC(B3) DG(C120):DC(B2) DC(C121):DG(B1) chainA (469) ARG834 0 11 15 6 0 0 0 0 0 0 0 (579) TYR957 1 0 0 0 0 0 0 0 0 0 0 (625) THR1003 1 0 0 0 0 0 0 0 0 0 0 (675) LYS1053 0 7 10 0 0 0 0 0 0 0 0 (703) ARG1081 0 0 0 6 3 0 0 0 0 0 0 prot.sequence eqvfhfywldayedqynqpgvvflfgkvwiesaethvsccvmvkniertlyflpremkidlntgketgtpismkdvyeefdekiatkykimkfkskpveknyafeipdvpekseylevkysaempqlpqdlkgetfshvfgtntsslelflmnrkikgpcwlevkspqllnqpvswckaeamalkpdlvnvikdvsppplvvmafsmktmqnaknhqneiiamaalvhhsfaldkaapkppfqshfcvvskpkdcifpyafkeviekknvkvevaatertllgfflakvhkidpdiivghniygfelevllqrinvckaphwskigrlkrsnmpklgfgernatcgrmicdveisakelircksyhlselvqqilktervvipmeniqnmysessqllyllehtwkdakfilqimcelnvlplalqitniagnimsrtlmggrserneflllhafyennyivpdkqifRkkaayagglvldpkvgfydkfillldfnslypsiiqefnicfttvqrveqipelpdpslemgilpreirklverrkqvkqlmkqqdlnpdlilqydirqkalkltansmYgclgfsysrfyakplaalvtykgreilmhtkemvqkmnleviygdTdsimintnstnleevfklgnkvksevnklyklleididgvfksllllkkKkyaalvveptsdgnyvtkqelkgldivRrdwcdlakdtgnfvigqilsdqsrdtiveniqkrlieigenvlngsvpvsqfeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtvsyvicqdgsnltasqrayapeqlqkqdnltidtqyylaqqihpvvaricepidgidavliatwlgldptqfrv >6asb_F: title=CXXC AND PHD-TYPE ZINC FINGER REGIONS OF FBXL19 IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DG(A1):DC(B12) DC(A2):DG(B11) DC(A3):DG(B10) DA(A4):DT(B9) DA(A5):DT(B8) DC(A6):DG(B7) DG(A7):DC(B6) DT(A8):DA(B5) DT(A9):DA(B4) DG(A10):DC(B3) DG(A11):DC(B2) DC(A12):DG(B1) DG(D1):DC(E12) DC(D2):DG(E11) DC(D3):DG(E10) DA(D4):DT(E9) DA(D5):DT(E8) DC(D6):DG(E7) DG(D7):DC(E6) DT(D8):DA(E5) DT(D9):DA(E4) DG(D10):DC(E3) DG(D11):DC(E2) DC(D12):DG(E1) chainF ( 1) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 15 0 0 0 0 0 0 ( 34) MET68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 35) LYS69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 7 0 0 0 0 0 ( 36) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 5 0 0 0 0 prot.sequence RrtrcrrcracvrtecgdchfcrdmkkfggpgrMKQscllrqctapvlphtavcllcfglslmecticneivhpgcipncwecrc >6asd_C: title=ZINC FINGER REGION OF HUMAN TET1 IN COMPLEX WITH CPG DNA organism=HOMO SAPIENS DNA sequence DG(A1):DC(B12) DC(A2):DG(B11) DC(A3):DG(B10) DA(A4):DT(B9) DC(A5):DG(B8) DC(A6):DG(B7) DG(A7):DC(B6) DG(A8):DC(B5) DT(A9):DA(B4) DG(A10):DC(B3) DG(A11):DC(B2) DC(A12):DG(B1) chainC ( 2) LYS587 0 0 0 0 0 0 0 4 1 6 0 0 ( 23) TYR608 0 0 0 0 4 0 0 0 0 0 0 0 ( 31) HIS616 0 0 0 0 0 0 21 13 17 0 0 0 ( 32) GLN617 0 0 0 0 5 10 5 0 0 0 0 0 prot.sequence gKrkrcgvcepcqqktncgectYcknrknsHQickkrkceelkkk >6asw_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 9.0 organism=? DNA sequence DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6asw_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 9.0 organism=? DNA sequence DC(F803):DG(E725) DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) DG(F817):DC(E711) DC(F818):DG(E710) DG(F819):DC(E709) DC(F820):DG(E708) DC(F821):DG(E707) chainC ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 (267) ASN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (450) ARG448 0 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLN475 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkAlteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6asx_IJ: title=CRYOEM STRUCTURE OF E.COLI HIS PAUSE ELONGATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(B2):DA(A31) DC(B3):DG(A30) DT(B4):DA(A29) DG(B5):DC(A28) DA(B6):DT(A27) DA(B7):DT(A26) DT(B8):DA(A25) DC(B9):DG(A24) DT(B10):DA(A23) DC(B11):DG(A22) DT(B12):DA(A21) DT(B13):DA(A20) DC(B14):DG(A19) DC(B15):DG(A18) DA(B16):DC(A17) DG(B17):DT(A16) DC(B18):DT(A7) DA(B19):DC(A6) DC(B20):DC(A5) DA(B21):DT(A4) DC(B22):DG(A3) DA(B23):DC(A2) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 chainJ ( 31) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmraessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6asx_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI HIS PAUSE ELONGATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(A2):DA(B23) DG(A3):DC(B22) DT(A4):DA(B21) DC(A5):DC(B20) DC(A6):DA(B19) DT(A7):DC(B18) DT(A16):DG(B17) DC(A17):DA(B16) DG(A18):DC(B15) DG(A19):DC(B14) DA(A20):DT(B13) DA(A21):DT(B12) DG(A22):DC(B11) DA(A23):DT(B10) DG(A24):DC(B9) DA(A25):DT(B8) DT(A26):DA(B7) DT(A27):DA(B6) DC(A28):DG(B5) DA(A29):DT(B4) DG(A30):DC(B3) DA(A31):DT(B2) chainJ ( 31) TYR46 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmraessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6avm_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 9.5 WITH CROSS- LINKING TO SECOND BASE TEMPLATE OVERHANG organism=? DNA sequence DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN265 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 4 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsklLrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6avm_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 9.5 WITH CROSS- LINKING TO SECOND BASE TEMPLATE OVERHANG organism=? DNA sequence DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):DG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 96) ILE94 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN265 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 1 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs >6avm_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 9.5 WITH CROSS- LINKING TO SECOND BASE TEMPLATE OVERHANG organism=? DNA sequence DC(F803):DG(E725) DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) DG(F817):DC(E711) DC(F818):DG(E710) DG(F819):DC(E709) DC(F820):DG(E708) DC(F821):DG(E707) chainC ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 (267) ASN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (450) ARG448 0 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLN475 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkAlteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6avt_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 9.5 WITH CROSS- LINKING TO FIRST BASE TEMPLATE OVERHANG organism=? DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) chainA ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 (267) ASN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (450) ARG448 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLN475 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs >6avt_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 9.5 WITH CROSS- LINKING TO FIRST BASE TEMPLATE OVERHANG organism=? DNA sequence DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN265 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 5 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsklLrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6avt_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING D4TTP AT PH 9.5 WITH CROSS- LINKING TO FIRST BASE TEMPLATE OVERHANG organism=? DNA sequence DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):DG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 96) ILE94 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN265 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 2 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkAlteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6b0o_A:beta-beta-alpha_zinc_fingers; title=ZINC FINGER DOMAIN OF WT1(-KTS FORM) WITH 12+1MER OLIGONUCLEOTIDE WITH 3' TRIPLET TGT organism=Homo sapiens DNA sequence DG(B2):DC(C13) DC(B3):DG(C12) DG(B4):DC(C11) DT(B5):DA(C10) DG(B6):DC(C9) DG(B7):DC(C8) DG(B8):DC(C7) DA(B9):DT(C6) DG(B10):DC(C5) DT(B11):DA(C4) DG(B12):DC(C3) DT(B13):DA(C2) chainA ( 18) LYS336 0 0 0 0 0 0 0 0 0 0 0 1 ( 21) HIS339 0 0 0 0 0 0 0 0 0 9 0 0 ( 48) ARG366 0 0 0 0 0 0 0 7 11 7 0 0 ( 50) ASP368 0 0 0 0 0 0 0 0 0 6 6 0 ( 51) GLN369 0 0 0 0 0 0 1 3 0 0 0 0 ( 54) ARG372 0 0 0 0 0 7 12 3 0 0 0 0 ( 76) ARG394 0 0 0 0 12 12 2 0 0 0 0 0 ( 77) SER395 0 0 0 0 0 0 0 1 0 0 0 0 ( 78) ASP396 0 0 0 0 0 1 7 4 0 0 0 0 ( 79) HIS397 0 0 0 27 12 0 0 0 0 0 0 0 ( 82) THR400 0 0 0 1 0 0 0 0 0 0 0 0 (106) ARG424 0 17 11 11 0 0 0 0 0 0 0 0 (108) ASP426 0 1 2 5 1 0 0 0 0 0 0 0 (109) GLU427 5 3 0 0 0 0 0 0 0 0 0 0 (112) ARG430 7 12 5 0 0 0 0 0 0 0 0 0 prot.sequence hmrpfmcaypgcnkryfKlsHlqmhsrkhtgekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhqr >6b0p_A:beta-beta-alpha_zinc_fingers; title=ZINC FINGER DOMAIN OF WT1(-KTS FORM) WITH 12+1MER OLIGONUCLEOTIDE WITH 3' TRIPLET GGT organism=Homo sapiens DNA sequence DG(B2):DC(C13) DC(B3):DG(C12) DG(B4):DC(C11) DT(B5):DA(C10) DG(B6):DC(C9) DG(B7):DC(C8) DG(B8):DC(C7) DA(B9):DT(C6) DG(B10):DC(C5) DG(B11):DC(C4) DG(B12):DC(C3) DT(B13):DA(C2) chainA ( 3) ARG321 0 0 0 0 0 0 0 0 0 0 0 5 ( 16) TYR334 0 0 0 0 0 0 0 0 0 0 0 3 ( 17) PHE335 0 0 0 0 0 0 0 0 0 0 0 15 ( 21) HIS339 0 0 0 0 0 0 0 0 0 0 0 45 ( 48) ARG366 0 0 0 0 0 0 0 11 11 2 0 0 ( 50) ASP368 0 0 0 0 0 0 0 0 1 6 5 0 ( 51) GLN369 0 0 0 0 0 0 1 3 0 0 0 0 ( 54) ARG372 0 0 0 0 0 7 12 3 0 0 0 0 ( 76) ARG394 0 0 0 0 11 13 2 0 0 0 0 0 ( 77) SER395 0 0 0 0 0 0 0 1 0 0 0 0 ( 78) ASP396 0 0 0 0 0 1 6 6 0 0 0 0 ( 79) HIS397 0 0 0 26 11 0 0 0 0 0 0 0 ( 82) THR400 0 0 0 1 0 0 0 0 0 0 0 0 (106) ARG424 0 18 14 12 0 0 0 0 0 0 0 0 (108) ASP426 0 0 1 4 2 0 0 0 0 0 0 0 (109) GLU427 4 3 0 0 0 0 0 0 0 0 0 0 (112) ARG430 6 9 4 0 0 0 0 0 0 0 0 0 prot.sequence hmRpfmcaypgcnkrYFklsHlqmhsrkhtgekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhq >6b0q_A:beta-beta-alpha_zinc_fingers; title=ZINC FINGER DOMAIN OF WT1(-KTS FORM) WITH 13+1MER OLIGONUCLEOTIDE WITH 3' TRIPLET TGT organism=Homo sapiens DNA sequence DA(C2):DT(B14) DA(C3):DT(B13) DC(C4):DG(B12) DA(C5):DT(B11) DC(C6):DG(B10) DT(C7):DA(B9) DC(C8):DG(B8) DC(C9):DG(B7) DC(C10):DG(B6) DA(C11):DT(B5) DC(C12):DG(B4) DG(C13):DC(B3) DC(C14):DG(B2) chainA ( 48) ARG366 0 0 0 7 11 10 0 0 0 0 0 0 0 ( 50) ASP368 0 0 1 7 1 0 0 0 0 0 0 0 0 ( 51) GLN369 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 54) ARG372 0 0 0 0 0 2 11 8 0 0 0 0 0 ( 76) ARG394 0 0 0 0 0 0 1 11 11 0 0 0 0 ( 77) SER395 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 78) ASP396 0 0 0 0 0 7 6 1 0 0 0 0 0 ( 79) HIS397 0 0 0 0 0 0 0 0 11 28 0 0 0 (106) ARG424 0 0 0 0 0 0 0 0 0 9 11 14 0 (108) ASP426 0 0 0 0 0 0 0 0 1 9 0 0 0 (109) GLU427 0 0 0 0 0 0 0 0 0 0 0 4 1 (112) ARG430 0 0 0 0 0 0 0 0 0 0 1 7 6 prot.sequence hmrpfmcaypgcnkryfklshlqmhsrkhtgekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRSDHlkthtrthtgekpfscrwpscqkkfaRsDElvRhhnmhqr >6b0r_A:beta-beta-alpha_zinc_fingers; title=ZINC FINGER DOMAIN OF WT1(-KTS FORM) WITH M342R MUTATION AND 14+1MER OLIGONUCLEOTIDE WITH 3' TRIPLET TGG organism=Homo sapiens DNA sequence DG(B2):DC(C15) DC(B3):DG(C14) DG(B4):DC(C13) DT(B5):DA(C12) DG(B6):DC(C11) DG(B7):DC(C10) DG(B8):DC(C9) DA(B9):DT(C8) DG(B10):DC(C7) DG(B11):DC(C6) DG(B12):DC(C5) DT(B13):DA(C4) DT(B14):DA(C3) DA(B15):DT(C2) chainA ( 18) LYS336 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 20) SER338 0 0 0 0 0 0 0 0 0 0 0 1 1 0 ( 21) HIS339 0 0 0 0 0 0 0 0 0 10 7 0 0 0 ( 24) ARG342 0 0 0 0 0 0 0 0 14 14 2 0 0 0 ( 48) ARG366 0 0 0 0 0 0 0 7 10 2 0 0 0 0 ( 50) ASP368 0 0 0 0 0 0 0 0 1 5 4 0 0 0 ( 51) GLN369 0 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 54) ARG372 0 0 0 0 0 7 11 3 0 0 0 0 0 0 ( 76) ARG394 0 0 0 0 13 12 2 0 0 0 0 0 0 0 ( 77) SER395 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 78) ASP396 0 0 0 0 0 1 7 7 0 0 0 0 0 0 ( 79) HIS397 0 0 0 26 12 0 0 0 0 0 0 0 0 0 ( 82) THR400 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (106) ARG424 0 14 12 11 0 0 0 0 0 0 0 0 0 0 (108) ASP426 0 1 0 4 1 0 0 0 0 0 0 0 0 0 (109) GLU427 1 4 0 0 0 0 0 0 0 0 0 0 0 0 (112) ARG430 14 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmrpfmcaypgcnkryfKlSHlqRhsrkhtgekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhq >6b1s_A:DNA/RNA_polymerases; title=HYDROGEN BONDING COMPLEMENTARY, NOT SIZE COMPLEMENTARITY IS KEY IN THE FORMATION OF THE DOUBLE HELIX organism=Moloney murine leukemia virus DNA sequence DC(F1):DG(E16) DT(F2):DA(E15) DT(F3):DA(E14) DA(F4):DT(E13) DT(F5):DA(E12) DA(F6):DT(E11) CGY(F7):DT(E10) CGY(F8):DT(E9) DT(F9):CGY(E8) DT(F10):CGY(E7) DT(F11):DA(E6) DA(F12):DT(E5) DT(F13):DA(E4) DA(F14):DT(E3) DA(F15):DT(E2) DG(F16):DC(E1) chainA ( 41) TYR64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 76) LEU99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 ( 81) VAL112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 83) ASP114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 ( 85) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 7 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >6b1s_AB:DNA/RNA_polymerases; title=HYDROGEN BONDING COMPLEMENTARY, NOT SIZE COMPLEMENTARITY IS KEY IN THE FORMATION OF THE DOUBLE HELIX organism=Moloney murine leukemia virus DNA sequence DC(F1):DG(E16) DT(F2):DA(E15) DT(F3):DA(E14) DA(F4):DT(E13) DT(F5):DA(E12) DA(F6):DT(E11) CGY(F7):DT(E10) CGY(F8):DT(E9) DT(F9):CGY(E8) DT(F10):CGY(E7) DT(F11):DA(E6) DA(F12):DT(E5) DT(F13):DA(E4) DA(F14):DT(E3) DA(F15):DT(E2) DG(F16):DC(E1) chainA ( 41) TYR64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 76) LEU99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 ( 81) VAL112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 83) ASP114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 ( 85) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 7 chainB ( 41) TYR64 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LEU99 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) PRO100 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) VAL112 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASP114 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG116 7 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr/twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLPvyrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemsgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >6b40_A: title=BBRAGL-3'TIR SYNAPTIC COMPLEX WITH NICKED DNA REFINED WITH C2 SYMMETRY organism=BRANCHIOSTOMA BELCHERI DNA sequence DA(B33):DT(C13) DA(B34):DT(C12) DG(B35):DC(C11) DT(B36):DA(C10) DA(B37):DT(C9) DT(B38):DA(C8) DC(B39):DG(C7) DA(B40):DT(C6) DT(B41):DA(C5) DA(B42):DT(C4) DG(B43):DC(C3) DT(B44):DA(C2) chainA (379) ALA951 0 0 0 0 0 0 0 0 0 0 0 1 (381) ASN953 0 0 0 0 0 0 0 0 0 2 8 5 (384) ARG956 0 0 0 0 0 0 0 0 0 0 0 15 (423) ARG995 0 0 0 0 0 0 0 0 0 0 0 4 (488) GLU1060 0 0 0 0 0 0 0 0 0 0 0 28 (491) GLU1063 0 0 0 0 0 0 0 0 0 0 0 1 (492) ALA1064 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence scmtpeeclgmrldmlmtknqyskeynilkergfstlcppkqldaiektlmpgtaryslepdsvtmdfheyvpdfpcpntkgvrfpyahavaktleeledeivnglkklgrdpndptlvihtickdgadgmgdvsvhkeksdhllpdkalrfsfcvlrcsvmhkdtevtiyedpnpnsvrsnrpvlecigdenddgtvavcvgpiecqrllmkdkimrvhmsdgtqrahyltffnsmvdekwdrahgglagagskylctlceavrdealekagsykitrtlkkievtaskmkyesqekdtfgvkgypllttepwergidathtdinmgnyfkslivremaqvhswaktanvkkqivdaeskldkhlkeslglnptlmmAgNyaRelfkaehadklvalvdkpdrksalvevlakfrqlrkvyRanwplndmsdevrqykakavemandlkthfpyapctnylhkviehvqeliehpsgvgsvgalssEgnEAgnklfrqlrlgharkgntynglrdvlcthwlytsktlrdkaaxxxxxxxxxxxxxxxxxxx >6b44_ABH: title=CRYO-EM STRUCTURE OF TYPE I-F CRISPR CRRNA-GUIDED CSY SURVEILLANCE COMPLEX WITH BOUND TARGET DSDNA organism=PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) DNA sequence DG(N33):DC(O17) DG(N34):DC(O16) DT(N35):DA(O15) DG(N36):DC(O14) DA(N37):DT(O13) DT(N38):DA(O12) DG(N39):DC(O11) DA(N40):DT(O10) DC(N41):DG(O9) chainA (237) LYS247 17 0 0 0 0 0 0 0 0 (239) GLN249 12 0 0 0 0 0 0 0 0 (240) ASN250 11 12 0 0 0 0 0 0 0 chainB chainH prot.sequence qelrqfiesfiqerlqgkldklqpdeddkrqtllathrreawladaarrvgqlqlvthtlkpihpdargsnlhslpqapgqpglagshelgdrlvsdvvgnaaaldvfkflslqyqgknllnwltedsaealqalsdnaeqarewrqafigittvkgapashslakqlyfplpgsgyhllaplfptslvhhvhallrearfgdaakaarearsrqeswphgfseypnlaiqkfggtKpQNisqlnnerrgenwllpslppnwqrqnvnapmrhssvfehdfgrtpevsrltrtlqrflaktvhnnlairqrraqlvaqicdealqyaarlrelepgwsatpgcqlhdaeqlwldplraqtdetflqrrlrgdwpaevgnrfanwlnravssdsqilgspeaaqwsqelskeltmfkeilederd/vtdpeallllprlsiqnanaisspltwgfpspgaftgfvhalqrrvgisldieldgvgivchrfeaqisqpagkrtkvfnltrnplnrdgstaaiveegrahlevslllgvhgdglddhpaqeiarqvqeqagamrlaggsilpwcnerfpapnaellmlggsdeqrrknqrrltrrllpgfalvsreallqqhletlrttlpeattldalldlcrinfepwqvrdkpgwlvpipaGyNAlsplylpgevrnardretplrfvenlfglgewlsphrvaalsdllwyhhaepdkglyrwstprfv/lstasvlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisnrlktkdrdpakldasiqspnlqtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqelildkgdkkgqKsKTlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggvfge >6b44_CDEFG: title=CRYO-EM STRUCTURE OF TYPE I-F CRISPR CRRNA-GUIDED CSY SURVEILLANCE COMPLEX WITH BOUND TARGET DSDNA organism=PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) / PSEUDOMONAS AERUGINOSA (STRAIN UCBPP-PA14) DNA sequence DG(N3) DG(N4) DT(N5) DA(N6) DG(N7) DA(N8) DC(N9) DG(N10) DC(N11) DG(N12) DG(N13) DA(N14) DC(N15) DA(N16) DT(N17) DC(N18) DA(N19) DA(N20) DG(N21) DC(N22) DC(N23) DC(N24) DG(N25) DC(N26) DC(N27) DG(N28) DT(N29) DG(N30) DA(N31) DA(N32) DG(N33) DG(N34) DT(N35) DG(N36) DA(N37) DT(N38) DG(N39) DA(N40) DC(N41) DT(N42) DG(N43) chainC ( 6) VAL11 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) VAL335 0 0 4 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 6) VAL11 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) SER54 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN75 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LEU76 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN77 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR78 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) LEU233 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) ASP234 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) GLN241 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) VAL335 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 7) VAL11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER54 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN55 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO74 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN75 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU76 0 0 0 0 0 16 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN77 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LEU233 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) ASP234 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER243 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) VAL335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) VAL11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN55 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO74 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN75 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU76 0 0 0 0 0 0 0 0 0 0 0 15 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN77 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) VAL79 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LEU233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) ASP234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) LYS239 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) VAL335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 6) VAL11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) PRO74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) LEU233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) LYS239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) VAL335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lstasVlaferkldpsdalmsagawaqrdasqewpavtvreksqtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqelktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge/lstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtiSnrlktkdrdpakldasiqspNLQTvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLDkgdkkgQksktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge/ilstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtiSNrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLDkgdkkgqkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge/ilstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisNrlktkdrdpakldasiqsPNLQtVdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLDkgdkKgqkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfgea/lstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisNrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLdkgdkKgqkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge >6b44_E: title=CRYO-EM STRUCTURE OF TYPE I-F CRISPR CRRNA-GUIDED CSY SURVEILLANCE COMPLEX WITH BOUND TARGET DSDNA organism=? DNA sequence DG(N3) DG(N4) DT(N5) DA(N6) DG(N7) DA(N8) DC(N9) DG(N10) DC(N11) DG(N12) DG(N13) DA(N14) DC(N15) DA(N16) DT(N17) DC(N18) DA(N19) DA(N20) DG(N21) DC(N22) DC(N23) DC(N24) DG(N25) DC(N26) DC(N27) DG(N28) DT(N29) DG(N30) DA(N31) DA(N32) DG(N33) DG(N34) DT(N35) DG(N36) DA(N37) DT(N38) DG(N39) DA(N40) DC(N41) DT(N42) DG(N43) chainE ( 7) VAL11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER54 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN55 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO74 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN75 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU76 0 0 0 0 0 16 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN77 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LEU233 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) ASP234 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER243 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) VAL335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ilstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtiSNrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLDkgdkkgqkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge >6b6h_CDFGHI: title=THE CRYO-EM STRUCTURE OF A BACTERIAL CLASS I TRANSCRIPTION ACTIVATION COMPLEX organism=ESCHERICHIA COLI O157:H7 / ESCHERICHIA COLI O45:K1 (STRAIN S88 / EXPEC) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI O45:K1 (STRAIN S88 / EXPEC) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI O45:K1 (STRAIN S88 / EXPEC) DNA sequence DT(11):DA(288) DA(12):DT(287) DA(13):DT(286) DA(14):DT(285) DA(15):DT(284) DT(16):DA(283) DG(17):DC(282) DT(18):DA(281) DG(19):DC(280) DA(110):DT(279) DT(111):DA(278) DC(112):DG(277) DT(113):DA(276) DA(114):DT(275) DG(115):DC(274) DA(116):DT(273) DT(117):DA(272) DC(118):DG(271) DA(119):DT(270) DC(120):DG(269) DA(121):DT(268) DT(122):DA(267) DT(123):DA(266) DT(125):DA(265) DA(126):DT(263) DG(127):DC(262) DG(128):DC(261) DC(129):DG(260) DA(130):DT(259) DA(131):DT(258) DA(132):DT(257) DA(133):DT(256) DA(134):DT(255) DA(135):DT(254) DG(136):DC(253) DG(137):DC(252) DC(138):DG(251) DC(139):DG(250) DT(140):DA(249) DT(141):DA(248) DG(142):DC(247) DA(143):DT(246) DC(144):DG(245) DA(145):DT(244) DT(146):DA(243) DC(147):DG(242) DC(148):DG(241) DC(149):DG(240) DA(150):DT(239) DC(151):DG(238) DC(152):DG(237) DT(153):DA(236) DC(154):DG(235) DA(155):DT(234) DC(156):DG(233) DG(157):DC(232) DT(158):DA(231) DA(159):DT(230) DT(160):DA(229) DG(161):DC(228) DC(162):DG(227) DT(163):DA(226) DA(164):DT(225) DT(165):DA(224) DA(166):DT(223) DA(167):DT(222) DT(168):DA(221) DG(169):DG(220) DT(170):DG(219) DG(171):DA(218) DT(172):DT(217) DG(173):DG(216) DC(174):DC(215) DA(175):DT(214) DG(176):DC(213) DT(177):DA(212) DC(178):DG(211) DT(179):DA(210) DG(180):DC(29) DA(181):DT(28) DC(182):DG(27) DG(183):DC(26) DC(184):DG(25) DG(185):DC(24) DG(186):DC(23) DC(187):DG(22) DG(188):DC(21) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (173) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52 10 0 0 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 chainD (300) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 chainF ( 20) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) GLU503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (458) GLU574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (162) GLN170 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) SER179 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG180 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLU181 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR182 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG185 0 0 0 0 0 0 0 0 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (162) GLN170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveRavkerlslgdldtlmpqdminakpisaavkeffgSsqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttdpVRmyMReMgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNRglqfldliqegniglmkavdkFEyrRgYKfSTYaTWWirQaiTRsIadqartiripVHmiEtiNklnrisrqmlqemgreptpeelaermlmpedkirkvlkiaKEpismetpIgDdeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLEevgkqfdvTrERiRqieakalrklrhpsrsevlrsfldd/ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcSRETvgRilkmledqnlisahgktivvygtr/ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcsREtvgrilkmledqnlisahgktivvygtr/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwppa >6b6h_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=THE CRYO-EM STRUCTURE OF A BACTERIAL CLASS I TRANSCRIPTION ACTIVATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(11):DA(288) DA(12):DT(287) DA(13):DT(286) DA(14):DT(285) DA(15):DT(284) DT(16):DA(283) DG(17):DC(282) DT(18):DA(281) DG(19):DC(280) DA(110):DT(279) DT(111):DA(278) DC(112):DG(277) DT(113):DA(276) DA(114):DT(275) DG(115):DC(274) DA(116):DT(273) DT(117):DA(272) DC(118):DG(271) DA(119):DT(270) DC(120):DG(269) DA(121):DT(268) DT(122):DA(267) DT(123):DA(266) DT(125):DA(265) DA(126):DT(263) DG(127):DC(262) DG(128):DC(261) DC(129):DG(260) DA(130):DT(259) DA(131):DT(258) DA(132):DT(257) DA(133):DT(256) DA(134):DT(255) DA(135):DT(254) DG(136):DC(253) DG(137):DC(252) DC(138):DG(251) DC(139):DG(250) DT(140):DA(249) DT(141):DA(248) DG(142):DC(247) DA(143):DT(246) DC(144):DG(245) DA(145):DT(244) DT(146):DA(243) DC(147):DG(242) DC(148):DG(241) DC(149):DG(240) DA(150):DT(239) DC(151):DG(238) DC(152):DG(237) DT(153):DA(236) DC(154):DG(235) DA(155):DT(234) DC(156):DG(233) DG(157):DC(232) DT(158):DA(231) DA(159):DT(230) DT(160):DA(229) DG(161):DC(228) DC(162):DG(227) DT(163):DA(226) DA(164):DT(225) DT(165):DA(224) DA(166):DT(223) DA(167):DT(222) DT(168):DA(221) DG(169):DG(220) DT(170):DG(219) DG(171):DA(218) DT(172):DT(217) DG(173):DG(216) DC(174):DC(215) DA(175):DT(214) DG(176):DC(213) DT(177):DA(212) DC(178):DG(211) DT(179):DA(210) DG(180):DC(29) DA(181):DT(28) DC(182):DG(27) DG(183):DC(26) DC(184):DG(25) DG(185):DC(24) DG(186):DC(23) DC(187):DG(22) DG(188):DC(21) chainF ( 20) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) GLU503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (458) GLU574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aaaqvlssveseigrttdpVRmyMReMgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNRglqfldliqegniglmkavdkFEyrRgYKfSTYaTWWirQaiTRsIadqartiripVHmiEtiNklnrisrqmlqemgreptpeelaermlmpedkirkvlkiaKEpismetpIgDdeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLEevgkqfdvTrERiRqieakalrklrhpsrsevlrsfldd >6bce_A:Homing_endonucleases; title=WILD-TYPE I-LTRI BOUND TO COGNATE SUBSTRATE (PRE-CLEAVAGE COMPLEX) organism=Leptographium truncatum DNA sequence DG(B1):DC(C27) DG(B2):DC(C26) DT(B3):DA(C25) DC(B4):DG(C24) DT(B5):DA(C23) DA(B6):DT(C22) DA(B7):DT(C21) DA(B8):DT(C20) DC(B9):DG(C19) DG(B10):DC(C18) DT(B11):DA(C17) DC(B12):DG(C16) DG(B13):DC(C15) DT(B14):DA(C14) DA(B15):DT(C13) DT(B16):DA(C12) DA(B17):DT(C11) DG(B18):DC(C10) DG(B19):DC(C9) DA(B20):DT(C8) DG(B21):DC(C7) DC(B22):DG(C6) DA(B23):DT(C5) DT(B24):DA(C4) DT(B25):DA(C3) DT(B26):DA(C2) DG(B27):DC(C1) chainA ( 18) MET33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 20) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 ( 22) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 9 0 0 ( 32) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 34) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 20 0 0 0 0 ( 36) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 0 0 0 0 0 0 ( 38) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 1 0 0 0 0 0 0 0 ( 66) ASP81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 5 0 0 0 0 0 0 0 0 ( 70) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 ( 72) GLU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 (171) SER186 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) TYR188 0 0 0 0 0 0 0 0 0 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG190 0 0 0 0 0 0 6 14 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ALA192 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ASN194 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR196 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LEU197 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) GLN202 0 0 0 0 14 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) GLN204 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) GLN208 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR210 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ARG232 0 0 0 0 0 0 0 0 12 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ARG234 0 0 0 0 0 0 0 0 0 0 14 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) CYS246 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) THR252 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG311 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nispwtitgfadaessfMlTvSkdskRntgwSvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagegSfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRtCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnRgrs >6bcf_J:Homing_endonucleases; title=I-LTRI G183A BOUND TO COGNATE SUBSTRATE (PRE-CLEAVAGE COMPLEX) organism=Leptographium truncatum DNA sequence DA(L2):DT(K26) DA(L3):DT(K25) DA(L4):DT(K24) DT(L5):DA(K23) DG(L6):DC(K22) DC(L7):DG(K21) DT(L8):DA(K20) DC(L9):DG(K19) DC(L10):DG(K18) DT(L11):DA(K17) DA(L12):DT(K16) DT(L13):DA(K15) DA(L14):DT(K14) DC(L15):DG(K13) DG(L16):DC(K12) DA(L17):DT(K11) DC(L18):DG(K10) DG(L19):DC(K9) DT(L20):DA(K8) DT(L21):DA(K7) DT(L22):DA(K6) DA(L23):DT(K5) DG(L24):DC(K4) DA(L25):DT(K3) DC(L26):DG(K2) chainJ ( 18) MET33 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) SER37 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG49 0 0 0 14 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG51 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG53 0 0 0 0 0 0 1 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASP81 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG83 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG85 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLU87 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) TYR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 (175) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 6 0 0 0 0 0 (177) ALA192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 (179) ASN194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 (181) THR196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 (182) LEU197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 (187) GLN202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 18 0 0 0 (189) GLN204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 (193) GLN208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 (195) THR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (217) ARG232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 (221) CYS246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (227) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence nispwtitgfadaessfMltvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftaaegsfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRirtCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs >6bcg_A:Homing_endonucleases; title=I-LTRI A28G BOUND TO COGNATE SUBSTRATE (PRE-CLEAVAGE COMPLEX) organism=Leptographium truncatum DNA sequence DA(C2):DT(B26) DA(C3):DT(B25) DA(C4):DT(B24) DT(C5):DA(B23) DG(C6):DC(B22) DC(C7):DG(B21) DT(C8):DA(B20) DC(C9):DG(B19) DC(C10):DG(B18) DT(C11):DA(B17) DA(C12):DT(B16) DT(C13):DA(B15) DA(C14):DT(B14) DC(C15):DG(B13) DG(C16):DC(B12) DA(C17):DT(B11) DC(C18):DG(B10) DG(C19):DC(B9) DT(C20):DA(B8) DT(C21):DA(B7) DT(C22):DA(B6) DA(C23):DT(B5) DG(C24):DC(B4) DA(C25):DT(B3) DC(C26):DG(B2) chainA ( 18) MET33 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR35 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) SER37 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG42 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG49 0 0 0 15 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) ARG51 0 0 0 0 0 14 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG53 0 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ASP81 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG83 0 0 0 0 0 0 2 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG85 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLU87 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) TYR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 (168) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 5 0 0 0 0 0 (170) ALA192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 (172) ASN194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (174) THR196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 (175) LEU197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 (180) GLN202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 12 0 0 0 (182) GLN204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 9 0 0 0 0 (186) GLN208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (188) THR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (212) ARG234 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 13 0 0 0 0 0 0 0 0 0 (220) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 prot.sequence nispwtitgfadgessfMlTvSkdkRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkrdyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerqeipdsnwvagftagegsfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniriRtcvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs >6bch_AD:Homing_endonucleases; title=I-LTRI E29D BOUND TO COGNATE SUBSTRATE (NICKED COMPLEX) organism=Leptographium truncatum DNA sequence DA(F2):DT(G26) DA(F3):DT(G25) DA(F4):DT(G24) DT(F5):DA(G23) DG(F6):DC(G22) DC(F7):DG(G21) DT(F8):DA(G20) DC(F9):DG(G19) DC(F10):DG(G18) DT(F11):DA(G17) DA(F12):DT(E16) DT(F13):DA(E15) DA(F14):DT(E14) DC(F15):DG(E13) DG(F16):DC(E12) DA(F17):DT(E11) DC(F18):DG(E10) DG(F19):DC(E9) DT(F20):DA(E8) DT(F21):DA(E7) DT(F22):DA(E6) DA(F23):DT(E5) DG(F24):DC(E4) DA(F25):DT(E3) DC(F26):DG(E2) DC(C1):DG(E1) DA(C2):DT(X26) DA(C3):DT(X25) DA(C4):DT(X24) DT(C5):DA(X23) DG(C6):DC(X22) DC(C7):DG(X21) DT(C8):DA(X20) DC(C9):DG(X19) DC(C10):DG(X18) DT(C11):DA(X17) DA(C12):DT(B16) DT(C13):DA(B15) DA(C14):DT(B14) DC(C15):DG(B13) DG(C16):DC(B12) DA(C17):DT(B11) DC(C18):DG(B10) DG(C19):DC(B9) DT(C20):DA(B8) DT(C21):DA(B7) DT(C22):DA(B6) DA(C23):DT(B5) DG(C24):DC(B4) DA(C25):DT(B3) DC(C26):DG(B2) chainA ( 18) MET33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASP81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) TYR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 (175) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 2 0 0 0 0 0 (177) ALA192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (179) ASN194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (181) THR196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 (182) LEU197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 (187) GLN202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 12 0 0 0 (189) GLN204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 7 0 0 0 0 (193) GLN208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (195) THR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (217) ARG232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 15 12 0 0 0 0 0 0 0 (219) ARG234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (221) CYS246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (227) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chainD ( 18) MET33 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR35 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) SER37 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG49 0 0 0 17 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG51 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG53 0 0 0 0 0 0 1 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASP81 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG83 0 0 0 0 0 0 0 7 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG85 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLU87 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) TYR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ALA192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ASN194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LEU197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) GLN202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) GLN204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) GLN208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ARG232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ARG234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) CYS246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nispwtitgfadadssfMlTvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagegsfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRtCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs/nispwtitgfadadssfMlTvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagegsfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRtCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs >6bch_H:Homing_endonucleases; title=I-LTRI E29D BOUND TO COGNATE SUBSTRATE (NICKED COMPLEX) organism=Leptographium truncatum DNA sequence DG(I2):DC(J26) DT(I3):DA(J25) DC(I4):DG(J24) DT(I5):DA(J23) DA(I6):DT(J22) DA(I7):DT(J21) DA(I8):DT(J20) DC(I9):DG(J19) DG(I10):DC(J18) DT(I11):DA(J17) DC(I12):DG(J16) DG(I13):DC(J15) DT(I14):DA(J14) DA(I15):DT(J13) DT(I16):DA(J12) DA(K17):DT(J11) DG(K18):DC(J10) DG(K19):DC(J9) DA(K20):DT(J8) DG(K21):DC(J7) DC(K22):DG(J6) DA(K23):DT(J5) DT(K24):DA(J4) DT(K25):DA(J3) DT(K26):DA(J2) DG(N1):DC(J1) DG(N2):DC(O26) DT(N3):DA(O25) DC(N4):DG(O24) DT(N5):DA(O23) DA(N6):DT(O22) DA(N7):DT(O21) DA(N8):DT(O20) DC(N9):DG(O19) DG(N10):DC(O18) DT(N11):DA(O17) DC(N12):DG(O16) DG(N13):DC(O15) DT(N14):DA(O14) DA(N15):DT(O13) DT(N16):DA(O12) DA(P17):DT(O11) DG(P18):DC(O10) DG(P19):DC(O9) DA(P20):DT(O8) DG(P21):DC(O7) DC(P22):DG(O6) DA(P23):DT(O5) DT(P24):DA(O4) DT(P25):DA(O3) DT(P26):DA(O2) chainH ( 18) MET33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) TYR188 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG190 0 0 0 0 0 2 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ALA192 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ASN194 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR196 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LEU197 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) GLN202 0 0 0 12 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) GLN204 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) GLN208 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR210 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ARG232 0 0 0 0 0 0 0 11 15 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ARG234 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) CYS246 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) THR252 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nispwtitgfadadssfMlTvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdidaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagegsfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRtCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs >6bch_HL:Homing_endonucleases; title=I-LTRI E29D BOUND TO COGNATE SUBSTRATE (NICKED COMPLEX) organism=Leptographium truncatum DNA sequence DG(I2):DC(J26) DT(I3):DA(J25) DC(I4):DG(J24) DT(I5):DA(J23) DA(I6):DT(J22) DA(I7):DT(J21) DA(I8):DT(J20) DC(I9):DG(J19) DG(I10):DC(J18) DT(I11):DA(J17) DC(I12):DG(J16) DG(I13):DC(J15) DT(I14):DA(J14) DA(I15):DT(J13) DT(I16):DA(J12) DA(K17):DT(J11) DG(K18):DC(J10) DG(K19):DC(J9) DA(K20):DT(J8) DG(K21):DC(J7) DC(K22):DG(J6) DA(K23):DT(J5) DT(K24):DA(J4) DT(K25):DA(J3) DT(K26):DA(J2) DG(N1):DC(J1) DG(N2):DC(O26) DT(N3):DA(O25) DC(N4):DG(O24) DT(N5):DA(O23) DA(N6):DT(O22) DA(N7):DT(O21) DA(N8):DT(O20) DC(N9):DG(O19) DG(N10):DC(O18) DT(N11):DA(O17) DC(N12):DG(O16) DG(N13):DC(O15) DT(N14):DA(O14) DA(N15):DT(O13) DT(N16):DA(O12) DA(P17):DT(O11) DG(P18):DC(O10) DG(P19):DC(O9) DA(P20):DT(O8) DG(P21):DC(O7) DC(P22):DG(O6) DA(P23):DT(O5) DT(P24):DA(O4) DT(P25):DA(O3) DT(P26):DA(O2) chainH ( 18) MET33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) TYR188 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG190 0 0 0 0 0 2 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ALA192 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ASN194 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR196 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LEU197 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) GLN202 0 0 0 12 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) GLN204 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) GLN208 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR210 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ARG232 0 0 0 0 0 0 0 11 15 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ARG234 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) CYS246 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) THR252 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 18) MET33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 20) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 22) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 ( 34) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 17 0 0 0 ( 36) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 0 0 0 0 0 ( 38) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 1 0 0 0 0 0 0 ( 66) ASP81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 68) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 7 0 0 0 0 0 0 0 ( 70) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 ( 72) GLU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 (173) TYR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ALA192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ASN194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LEU197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) GLN202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) GLN204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) GLN208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ARG232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 16 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ARG234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) CYS246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nispwtitgfadadssfMlTvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdidaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagegsfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRtCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs/nispwtitgfadadssfMlTvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagegsfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRtCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs >6bci_A:Homing_endonucleases; title=WILD-TYPE I-LTRI BOUND TO NON-COGNATE C4 SUBSTRATE (PRE-CLEAVAGE COMPLEX) organism=LEPTOGRAPHIUM TRUNCATUM DNA sequence DG(B1):DC(D27) DG(B2):DC(D26) DT(B3):DA(D25) DC(B4):DG(D24) DT(B5):DA(D23) DA(B6):DT(D22) DA(B7):DT(D21) DA(B8):DT(D20) DC(B9):DG(D19) DG(B10):DC(D18) DT(B11):DA(D17) DC(B12):DG(D16) DG(B13):DC(D15) DG(B14):DC(D14) DT(B15):DA(D13) DT(B16):DA(D12) DA(B17):DT(D11) DG(B18):DC(D10) DG(B19):DC(D9) DA(B20):DT(D8) DG(B21):DC(D7) DC(B22):DG(D6) DA(B23):DT(D5) DT(B24):DA(D4) DT(B25):DA(D3) DT(B26):DA(D2) DG(B27):DC(D1) chainA ( 19) MET33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 21) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 ( 23) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 8 0 0 ( 35) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 18 0 0 0 0 ( 37) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 9 0 0 0 0 0 0 ( 39) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 1 0 0 0 0 0 0 0 ( 67) ASP81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 7 0 0 0 0 0 0 0 0 ( 71) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 ( 73) GLU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 (172) SER186 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) TYR188 0 0 0 0 0 0 0 0 0 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ARG190 0 0 0 0 0 0 7 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ALA192 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) THR196 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) LEU197 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) GLN202 0 0 0 0 12 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) GLN204 0 0 0 0 0 7 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) GLN208 0 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) THR210 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) ARG232 0 0 0 0 0 0 0 0 11 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) ARG234 0 0 0 0 0 0 0 0 0 0 9 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) CYS246 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) THR252 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dnispwtitgfadaessfMlTvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagegSfYiRiAknsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRktCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrsl >6bcn_A:Homing_endonucleases; title=I-LTRI E184D BOUND TO COGNATE SUBSTRATE (PRE-CLEAVAGE COMPLEX) organism=Leptographium truncatum DNA sequence DA(D2):DT(B26) DA(D3):DT(B25) DA(D4):DT(B24) DT(D5):DA(B23) DG(D6):DC(B22) DC(D7):DG(B21) DT(D8):DA(B20) DC(D9):DG(B19) DC(D10):DG(B18) DT(D11):DA(B17) DA(D12):DT(B16) DT(D13):DA(B15) DA(D14):DT(B14) DC(D15):DG(B13) DG(D16):DC(B12) DA(D17):DT(B11) DC(D18):DG(B10) DG(D19):DC(B9) DT(D20):DA(B8) DT(D21):DA(B7) DT(D22):DA(B6) DA(D23):DT(B5) DG(D24):DC(B4) DA(D25):DT(B3) DC(D26):DG(B2) DC(F1):DG(B1) DA(F2):DT(E26) DA(F3):DT(E25) DA(F4):DT(E24) DT(F5):DA(E23) DG(F6):DC(E22) DC(F7):DG(E21) DT(F8):DA(E20) DC(F9):DG(E19) DC(F10):DG(E18) DT(F11):DA(E17) DA(F12):DT(E16) DT(F13):DA(E15) DA(F14):DT(E14) DC(F15):DG(E13) DG(F16):DC(E12) DA(F17):DT(E11) DC(F18):DG(E10) DG(F19):DC(E9) DT(F20):DA(E8) DT(F21):DA(E7) DT(F22):DA(E6) DA(F23):DT(E5) DG(F24):DC(E4) DA(F25):DT(E3) DC(F26):DG(E2) chainA ( 16) SER31 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) MET33 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR35 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) SER37 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 7 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG49 0 0 0 11 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG51 0 0 0 0 0 12 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG53 0 0 0 0 0 0 1 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASP81 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG83 0 0 0 0 0 0 0 6 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG85 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLU87 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) SER186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) TYR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ALA192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ASN194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LEU197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) GLN202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) GLN204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) GLN208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR210 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ARG232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ARG234 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) HIS244 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) CYS246 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nispwtitgfadaesSfMlTvSkdskRntgwSvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagdgSfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRkHtCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs >6bcn_AC:Homing_endonucleases; title=I-LTRI E184D BOUND TO COGNATE SUBSTRATE (PRE-CLEAVAGE COMPLEX) organism=Leptographium truncatum DNA sequence DA(D2):DT(B26) DA(D3):DT(B25) DA(D4):DT(B24) DT(D5):DA(B23) DG(D6):DC(B22) DC(D7):DG(B21) DT(D8):DA(B20) DC(D9):DG(B19) DC(D10):DG(B18) DT(D11):DA(B17) DA(D12):DT(B16) DT(D13):DA(B15) DA(D14):DT(B14) DC(D15):DG(B13) DG(D16):DC(B12) DA(D17):DT(B11) DC(D18):DG(B10) DG(D19):DC(B9) DT(D20):DA(B8) DT(D21):DA(B7) DT(D22):DA(B6) DA(D23):DT(B5) DG(D24):DC(B4) DA(D25):DT(B3) DC(D26):DG(B2) DC(F1):DG(B1) DA(F2):DT(E26) DA(F3):DT(E25) DA(F4):DT(E24) DT(F5):DA(E23) DG(F6):DC(E22) DC(F7):DG(E21) DT(F8):DA(E20) DC(F9):DG(E19) DC(F10):DG(E18) DT(F11):DA(E17) DA(F12):DT(E16) DT(F13):DA(E15) DA(F14):DT(E14) DC(F15):DG(E13) DG(F16):DC(E12) DA(F17):DT(E11) DC(F18):DG(E10) DG(F19):DC(E9) DT(F20):DA(E8) DT(F21):DA(E7) DT(F22):DA(E6) DA(F23):DT(E5) DG(F24):DC(E4) DA(F25):DT(E3) DC(F26):DG(E2) chainA ( 16) SER31 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) MET33 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR35 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) SER37 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 7 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG49 0 0 0 11 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG51 0 0 0 0 0 12 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG53 0 0 0 0 0 0 1 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASP81 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG83 0 0 0 0 0 0 0 6 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG85 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLU87 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) SER186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) TYR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ALA192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ASN194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LEU197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) GLN202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) GLN204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) GLN208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR210 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ARG232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ARG234 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) HIS244 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) CYS246 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 16) SER31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) MET33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASP81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) SER186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (173) TYR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 0 0 0 0 0 0 0 0 (175) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 12 3 0 0 0 0 0 (177) ALA192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 (179) ASN194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 (181) THR196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 (182) LEU197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 (187) GLN202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 11 0 0 0 (189) GLN204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 7 0 0 0 0 (193) GLN208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 0 0 0 0 (195) THR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 (217) ARG232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 15 10 0 0 0 0 0 0 0 (219) ARG234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 13 0 0 0 0 0 0 0 0 0 (222) CYS246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (228) THR252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (287) ARG311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence nispwtitgfadaesSfMlTvSkdskRntgwSvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagdgSfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRkHtCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs/nispwtitgfadaesSfMlTvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagdgSfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRktCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnRgrs >6bct_A:Homing_endonucleases; title=I-LTRI E184D BOUND TO NON-COGNATE C4 SUBSTRATE (PRE-CLEAVAGE COMPLEX) organism=Leptographium truncatum DNA sequence DG(B2):DA(D27) DT(B3):DC(D26) DC(B4):DG(D24) DT(B5):DA(D23) DA(B6):DT(D22) DA(B7):DT(D21) DA(B8):DT(D20) DC(B9):DG(D19) DG(B10):DC(D18) DT(B11):DA(D17) DC(B12):DG(D16) DG(B13):DC(D15) DG(B14):DC(D14) DT(B15):DA(D13) DT(B16):DA(D12) DA(B17):DT(D11) DG(B18):DC(D10) DG(B19):DC(D9) DA(B20):DT(D8) DG(B21):DC(D7) DC(B22):DG(D6) DA(B23):DT(D5) DT(B24):DA(D4) DT(B25):DA(D3) DT(B26):DA(D2) DG(B27):DC(D1) chainA ( 18) MET33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 20) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 ( 22) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 ( 34) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 18 0 0 0 0 ( 36) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 11 0 0 0 0 0 0 ( 38) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 ( 66) ASP81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 6 0 0 0 0 0 0 0 0 ( 70) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 ( 72) GLU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 (171) SER186 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) TYR188 0 0 0 0 0 0 0 0 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ALA192 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) THR196 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) GLN202 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) GLN204 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) GLN208 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR210 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ARG232 0 0 0 0 0 0 0 4 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ARG234 0 0 0 0 0 0 0 0 0 8 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) CYS246 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) THR252 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nispwtitgfadaessfMlTvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagdgSfYiriAknsTlktgyQvQsvfQiTqdtrdielmknlisylncgniRiRktCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs >6bd0_A:Homing_endonucleases; title=I-ONUI K227Y, D236A BOUND TO COGNATE SUBSTRATE (PRE-CLEAVAGE COMPLEX) organism=Ophiostoma novo-ulmi subsp. americana DNA sequence DG(C1):DC(B25) DG(C2):DC(B24) DT(C3):DA(B23) DA(C4):DT(B22) DA(C5):DT(B21) DA(C6):DT(B20) DA(C7):DT(B19) DG(C8):DC(B18) DG(C9):DC(B17) DT(C10):DA(B16) DT(C11):DA(B15) DG(C12):DC(B14) DA(C13):DT(B13) DA(C14):DT(B12) DT(C15):DA(B11) DA(C16):DT(B10) DA(C17):DT(B9) DG(C18):DC(B8) DT(C19):DA(B7) DG(C20):DC(B6) DG(C21):DC(B5) DA(C22):DT(B4) DA(C23):DT(B3) DA(C24):DT(B2) DG(C25):DC(B1) chainA ( 21) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 25) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 12 2 0 0 0 0 ( 27) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 2 0 0 0 ( 29) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 31) LYS34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 ( 32) SER35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 37) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 39) GLU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 ( 43) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 ( 45) THR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 ( 69) SER72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 ( 73) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 77) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 (177) CYS180 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) PHE182 0 0 0 0 0 0 0 2 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ASN184 0 0 0 0 0 1 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ILE186 0 0 0 0 3 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) SER188 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) LYS189 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) GLN195 0 0 0 16 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) GLN197 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) THR203 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) TYR223 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) LYS225 0 0 0 0 0 0 3 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) TYR227 0 0 0 0 0 0 0 0 14 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS229 0 0 0 0 0 0 0 0 0 0 7 8 6 0 0 0 0 0 0 0 0 0 0 0 0 (229) PHE232 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (231) TRP234 0 0 0 0 0 0 0 0 0 0 7 19 2 0 0 0 0 0 0 0 0 0 0 0 0 (237) THR240 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esrresinpwiltgfadaegSfllRiRnNnKSsvgyStElgfQiTlhnkdksileniqstwkvgvianSgdnAvSlKvtrfedlkviidhfekyplitqklgdymlfkqafcvmenkehlkingikelvrikaklnwgltdelkkafpeiiskerslinknipnfkwlagftsgegCfFvNlIkSKsklgvQvQlvfSiTqhikdknlmnslitylgcgYiKeYnKseFsWlafvvTkfsdindkiipvfqentligvkledfedwckvaklieekkhltesgldeikkiklnmnKgrvf >6bda_A:Homing_endonucleases; title=WILD-TYPE I-ONUI BOUND TO A3G SUBSTRATE (POST-CLEAVAGE COMPLEX) organism=Ophiostoma novo-ulmi subsp. americana DNA sequence DG(D1):DC(C25) DG(D2):DC(C24) DT(D3):DA(C23) DA(D4):DT(C22) DA(D5):DT(C21) DA(D6):DT(C20) DA(D7):DT(C19) DG(D8):DC(C18) DG(D9):DC(C17) DT(D10):DA(C16) DC(D11):DG(C15) DG(D12):DC(B14) DA(D13):DT(B13) DA(D14):DT(B12) DT(D15):DA(B11) DA(E16):DT(B10) DA(E17):DT(B9) DG(E18):DC(B8) DT(E19):DA(B7) DG(E20):DC(B6) DG(E21):DC(B5) DA(E22):DT(B4) DA(E23):DT(B3) DA(E24):DT(B2) DG(E25):DC(B1) chainA ( 20) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 12 2 0 0 0 0 ( 22) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 1 0 0 0 ( 24) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 26) LYS34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 ( 27) SER35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 32) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 34) GLU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 ( 38) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 40) THR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 64) SER72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 ( 68) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 72) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 74) THR82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (172) CYS180 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) PHE182 0 0 0 0 0 0 0 2 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ASN184 0 0 0 0 0 1 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ILE186 0 0 0 0 2 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) SER188 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) LYS189 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) SER190 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) GLN195 0 0 0 16 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) GLN197 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR203 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) TYR223 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) LYS225 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) LYS227 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) LYS229 0 0 0 0 0 0 0 0 0 0 4 7 4 0 0 0 0 0 0 0 0 0 0 0 0 (224) PHE232 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (226) TRP234 0 0 0 0 0 0 0 0 0 0 5 16 2 0 0 0 0 0 0 0 0 0 0 0 0 (232) THR240 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) LYS299 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sinpwiltgfadaegsfllRiRnNnKSsvgyStElgfQiTlhnkdksileniqstwkvgvianSgdnAvSlKvTrfedlkviidhfekyplitqklgdymlfkqafcvmenkehlkingikelvrikaklnwgltdelkfafpeiiskerslinknipnfkwlagftsgegCfFvNlIkSKSklgvQvQlvfsiTqhikdknlmnslitylgcgYiKeKnKseFsWlDfvvTkfsdindkiipvfqentligvkledfedwckvaklieekkhltesgldeikkiklnmnKgrvf >6bdb_A:Homing_endonucleases; title=I-ONUI K227Y, D236A BOUND TO A3G SUBSTRATE (PRE-CLEAVAGE COMPLEX) organism=Ophiostoma novo-ulmi subsp. americana DNA sequence DC(B1):DG(C25) DT(B2):DA(C24) DT(B3):DA(C23) DT(B4):DA(C22) DC(B5):DG(C21) DC(B6):DG(C20) DA(B7):DT(C19) DC(B8):DG(C18) DT(B9):DA(C17) DT(B10):DA(C16) DA(B11):DT(C15) DT(B12):DA(C14) DT(B13):DA(C13) DC(B14):DG(C12) DG(B15):DC(C11) DA(B16):DT(C10) DC(B17):DG(C9) DC(B18):DG(C8) DT(B19):DA(C7) DT(B20):DA(C6) DT(B21):DA(C5) DT(B22):DA(C4) DA(B23):DT(C3) DC(B24):DG(C2) DC(B25):DG(C1) chainA ( 18) SER24 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG28 0 0 0 0 2 13 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG30 0 0 0 2 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN32 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS34 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER40 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLU42 0 0 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN46 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR48 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) SER72 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ALA76 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LYS80 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) CYS180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (174) PHE182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 2 0 0 0 0 0 0 0 (176) ASN184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 1 0 0 0 0 0 (178) ILE186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 (187) GLN195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 16 0 0 0 (189) GLN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 (195) THR203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (215) TYR223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (217) LYS225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 1 0 0 0 0 0 0 (219) TYR227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 0 0 0 0 0 0 0 0 (221) LYS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (223) GLU231 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 0 0 0 0 0 0 (224) PHE232 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 (226) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 1 0 0 0 0 0 0 0 0 0 (232) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 prot.sequence eesinpwiltgfadaegSfllRiRnNnKssvgyStElgfQiTlhnkdksileniqstwkvgvianSgdnAvSlKvtrfedlkviidhfekyplitqklgdymlfkqafcvmenkehlkingikelvrikaklnwgltdelkkafpeiisrslinknipnfkwlagftsgegCfFvNlIksksklgvQvQlvfSiTqhikdknlmnslitylgcgYiKeYnKsEFsWlafvvTkfsdindkiipvfqentligvkledfedwckvaklieekkhltesgldeikkiklnmnKgrvf >6bek_A:S13-like_H2TH_domain; title=STRUCTURE OF SIHF BOUND TO AN 8BP PALINDROMIC DNA organism=? DNA sequence DC(C1):DG(B8) DA(C2):DT(B7) DT(C3):DA(B6) DG(C4):DC(B5) DC(C5):DG(B4) DA(C6):DT(B3) DT(C7):DA(B2) DG(C8):DC(B1) chainA prot.sequence aalekaaaarreraevknrlkhsgaslhevikqgqendvigkmkvsalleslpgvgkvrakqimerlgisesRrvrglgsnqiaslerefgs >6bel_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH R- ISOMER OF BETA-GAMMA-CHF-DCTP organism=HOMO SAPIENS DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 36 ( 26) LYS35 0 0 0 0 5 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6bem_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH S- ISOMER OF BETA-GAMMA-CHCL-DCTP organism=HOMO SAPIENS DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 34 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6bhx_ABC:Nucleic_acid-binding_proteins; title=B. SUBTILIS SSBA WITH DNA organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DT(E1) DT(E2) DT(E3) DT(E4) DT(E7) DT(E8) DT(E9) DT(E10) DT(E11) DT(E12) DT(E13) chainA ( 54) GLN57 0 0 0 0 5 0 0 0 0 0 0 ( 57) ASN60 0 0 0 0 3 0 0 0 0 0 0 ( 94) GLN101 0 0 0 0 2 0 0 0 0 0 0 ( 95) PHE102 0 0 0 0 35 0 0 0 0 0 0 chainB ( 13) ARG10 0 0 3 0 0 0 0 0 0 0 0 ( 15) THR12 0 4 0 0 0 0 0 0 0 0 0 ( 16) LYS13 7 0 0 0 0 0 0 0 0 0 0 ( 33) THR30 0 4 0 0 0 0 0 0 0 0 0 ( 35) ALA32 0 0 7 0 0 0 0 0 0 0 0 ( 37) ASN34 0 0 11 3 0 0 0 0 0 0 0 ( 39) THR36 0 0 0 0 0 3 0 0 0 0 0 ( 40) PHE37 0 0 0 2 0 3 0 0 0 0 0 ( 42) ALA46 0 0 3 0 0 0 0 0 0 0 0 ( 44) PHE48 0 32 8 0 0 0 0 0 0 0 0 ( 46) ASN50 0 1 0 0 0 0 0 0 0 0 0 chainC ( 3) HIS0 0 0 0 0 18 24 0 0 0 0 0 ( 88) PHE91 9 2 0 0 0 0 0 0 0 0 0 prot.sequence gshmlnrvvlvgrltkdpelrytpngaavatftlavnrtfteadfincvtwrrQaeNvanflkkgslagvdgrlqtrnygqrvfvtevqaesvQFlep/gshmlnrvvlvgRlTKdpelrytpngaavatfTlAvNrTFeAdFiNcvtwrrqaenvanflkkgslagvdgrlqtrnyeqqgqrvfvtevqaesvqfl/gsHmlnrvvlvgrltkdpelrytpngaavatftlavnrtfreadfincvtwrrqaenvanflkkgslagvdgrlqtrnyenqqgqrvFvtevqaesvqflep >6bhx_B:Nucleic_acid-binding_proteins; title=B. SUBTILIS SSBA WITH DNA organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DT(E1) DT(E2) DT(E3) DT(E4) DT(E7) DT(E8) DT(E9) DT(E10) DT(E11) DT(E12) DT(E13) chainB ( 13) ARG10 0 0 3 0 0 0 0 0 0 0 0 ( 15) THR12 0 4 0 0 0 0 0 0 0 0 0 ( 16) LYS13 7 0 0 0 0 0 0 0 0 0 0 ( 33) THR30 0 4 0 0 0 0 0 0 0 0 0 ( 35) ALA32 0 0 7 0 0 0 0 0 0 0 0 ( 37) ASN34 0 0 11 3 0 0 0 0 0 0 0 ( 39) THR36 0 0 0 0 0 3 0 0 0 0 0 ( 40) PHE37 0 0 0 2 0 3 0 0 0 0 0 ( 42) ALA46 0 0 3 0 0 0 0 0 0 0 0 ( 44) PHE48 0 32 8 0 0 0 0 0 0 0 0 ( 46) ASN50 0 1 0 0 0 0 0 0 0 0 0 prot.sequence gshmlnrvvlvgRlTKdpelrytpngaavatfTlAvNrTFeAdFiNcvtwrrqaenvanflkkgslagvdgrlqtrnyeqqgqrvfvtevqaesvqfl >6bjs_IJ: title=CRYOEM STRUCTURE OF E.COLI HIS PAUSE ELONGATION COMPLEX WITHOUT PAUSE HAIRPIN organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(A2):DA(B23) DG(A3):DC(B22) DT(A4):DA(B21) DC(A5):DC(B20) DC(A6):DA(B19) DT(A7):DC(B18) DT(A16):DG(B17) DC(A17):DA(B16) DG(A18):DC(B15) DG(A19):DC(B14) DA(A20):DT(B13) DA(A21):DT(B12) DG(A22):DC(B11) DA(A23):DT(B10) DG(A24):DC(B9) DA(A25):DT(B8) DT(A26):DA(B7) DT(A27):DA(B6) DC(A28):DG(B5) DA(A29):DT(B4) DG(A30):DC(B3) DA(A31):DT(B2) chainI (150) ARG151 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 29 1 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 31) TYR46 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6bjs_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI HIS PAUSE ELONGATION COMPLEX WITHOUT PAUSE HAIRPIN organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(A2):DA(B23) DG(A3):DC(B22) DT(A4):DA(B21) DC(A5):DC(B20) DC(A6):DA(B19) DT(A7):DC(B18) DT(A16):DG(B17) DC(A17):DA(B16) DG(A18):DC(B15) DG(A19):DC(B14) DA(A20):DT(B13) DA(A21):DT(B12) DG(A22):DC(B11) DA(A23):DT(B10) DG(A24):DC(B9) DA(A25):DT(B8) DT(A26):DA(B7) DT(A27):DA(B6) DC(A28):DG(B5) DA(A29):DT(B4) DG(A30):DC(B3) DA(A31):DT(B2) chainJ ( 31) TYR46 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6bkf_A:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins;ATP-dependent_DNA_ligase_DNA-binding_domain; title=LYSYL-ADENYLATE FORM OF HUMAN LIGIV CATALYTIC DOMAIN WITH BOUND DNA SUBSTRATE IN OPEN CONFORMATION organism=Homo sapiens DNA sequence DG(T1):DC(D8) DT(T2):DA(D7) DC(T3):DG(D6) DC(T4):DG(D5) DG(T5):DC(D4) DA(T6):DT(D3) DC(T7):DG(D2) DG(T8):DC(P11) DA(T9):DT(P10) DC(T10):DG(P9) DG(T11):DC(P8) DC(T12):DG(P7) DA(T13):DT(P6) DT(T14):DA(P5) DC(T15):DG(P4) DA(T16):DT(P3) DG(T17):DC(P2) DC(T18):DG(P1) chainA (407) ARG443 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tvashvpfadlcstleriqkskgraekirhfrefldswrkfhdalhkdvtdsfypamrlilpqlerermaygiketmlaklyiellnlprdgkdalkllnyrdfamiayfvlkprclqkgsltiqqvndlldsiasnnsakrkdlikksllqlitqssaleqkwlirmiikdlklgvsqqtifsvfhndaaelhnvttdlekvcrqlhdpsvglsdisitlfsafkpmlaaiadiehiekdmkhqsfyietkldgermqmhkdgdvykyfsrngynytdqfgasptegsltpfihnafkadiqicildgemmaynpntqtfmqlqtcycvfdvlmvnnkklghetlrkryeilssiftpipgrieivqktqahtknevidalneaidkreegimvkqplsiykpdkRgegwlkikpeyvsglmdeldilivggywgkrggmmshflcavaekppkpsvfhtlsrvgsgctmkelydlglklakywkpfhrkappssilcgtekpevyiepcnsvivqikaaeivpsdmyktgctlrfpriekirddkewhecmtlddleqlr >6bkg_A:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins;ATP-dependent_DNA_ligase_DNA-binding_domain; title=HUMAN LIGIV CATALYTIC DOMAIN WITH BOUND DNA-ADENYLATE INTERMEDIATE IN CLOSED CONFORMATION organism=Homo sapiens DNA sequence DG(T1):DC(D8) DT(T2):DA(D7) DC(T3):DG(D6) DC(T4):DG(D5) DG(T5):DC(D4) DA(T6):DT(D3) DC(T7):DG(D2) DG(T8):DC(P11) DA(T9):DT(P10) DC(T10):DG(P9) DG(T11):DC(P8) DC(T12):DG(P7) DA(T13):DT(P6) DT(T14):DA(P5) DC(T15):DG(P4) DA(T16):DT(P3) DG(T17):DC(P2) DC(T18):DG(P1) chainA (333) LYS345 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 (492) SER508 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (562) PHE578 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 prot.sequence sqtvashvpfadlcstleriqkskgraekirhfrefldswrkfhdalhkndvtdsfypamrlilpqlerermaygiketmlaklyiellnlprdgkdalkllnyrtptgdagdfamiayfvlkprcqkgsltiqqvndlldsiasnnsakrkdlikksllqlitqssaleqkwlirmiikdlklgvsqqtifsvfhndaaelhnvttdlekvcrqlhdpsvglsdisitlfsafkpmlaaiadiehiekdmkhqsfyietkldgErmqmhkdgdvykyfsrngynytdqfgasptegsltpfihnafkadiqicildgemmaynpntqtfmqKgtkfDikrmdlqtcycvfdvlmvnnkklghetlrkryeilssiftpipgrieivqktqahtknevidalneaidkreegimvkqplsiykpdkrgegwlkikpeyvsglmdeldilivggywgkgsRggmmshflcavaekpppgekpsvfhtlsrvgSgctmkelydlglklakywkpfhrkappssilcgtekpevyiepcnsvivqikaaeivpsdmyktgctlRFpriekirddkewhecmtlddleqlrgkasgklaskhly >6blo_AB: title=POL II ELONGATION COMPLEX WITH AN ABASIC LESION AT I+1 POSITION organism=? DNA sequence DA(T19) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) DG(T29) chainA (309) ARG350 0 0 1 0 0 0 0 0 0 0 (407) PRO448 0 1 0 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcggcgntqptirkdglklvgswvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsieddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsaRtvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsaistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgkekriqyakdilqkeflphitqlegfesrkafflgyminrlllCaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtlainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlRrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepdvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpitayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdr >6blp_AB: title=POL II ELONGATION COMPLEX WITH AN ABASIC LESION AT I+1 POSITION, SOAKING AMPCPP organism=? DNA sequence DA(T19) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) DG(T29) chainA (406) GLN447 0 1 0 0 0 0 0 0 0 0 (407) PRO448 0 2 0 0 0 0 0 0 0 0 (795) TYR836 8 0 0 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcggcgntqptirkdglklvgswvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsieddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrQPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsaistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtlainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshLRrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepdvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgEdviigkttpitayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdr >6blw_A:beta-beta-alpha_zinc_fingers; title=ZINC FINGER DOMAIN OF WT1(+KTS FORM) WITH M342R MUTATION AND 17+1MER OLIGONUCLEOTIDE WITH TRIPLET GGT organism=Homo sapiens DNA sequence DG(B2):DC(C18) DC(B3):DG(C17) DG(B4):DC(C16) DA(B5):DT(C15) DA(B6):DT(C14) DA(B7):DT(C13) DT(B8):DA(C12) DG(B9):DC(C11) DG(B10):DC(C10) DG(B11):DC(C9) DA(B12):DT(C8) DG(B13):DC(C7) DG(B14):DC(C6) DG(B15):DC(C5) DT(B16):DA(C4) DT(B17):DA(C3) chainA ( 20) LYS336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 22) SER338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 23) HIS339 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 ( 26) ARG342 0 0 0 0 0 0 0 0 0 0 0 12 12 2 0 0 ( 50) ARG366 0 0 0 0 0 0 0 0 0 0 2 11 2 0 0 0 ( 52) ASP368 0 0 0 0 0 0 0 0 0 0 0 1 5 6 0 0 ( 53) GLN369 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 56) ARG372 0 0 0 0 0 0 0 0 7 11 4 0 0 0 0 0 ( 78) ARG394 0 0 0 0 0 0 0 6 12 2 0 0 0 0 0 0 ( 79) SER395 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 80) ASP396 0 0 0 0 0 0 0 0 2 6 6 0 0 0 0 0 ( 81) HIS397 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 prot.sequence hmekrpfmcaypgcnkryfklSHlqRhsrkhtgekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRsDHlkthtrthtgkscrwpscqlvrhhnmhq >6bm2_AB: title=POL II ELONGATION COMPLEX WITH AN ABASIC LESION AT I-1 POSITION organism=? DNA sequence DC(T18) DA(T19) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) DG(T29) chainA (791) ALA832 0 2 0 0 0 0 0 0 0 0 0 chainB (436) GLN531 0 5 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcggcgntqptirkdglklvgswvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsieddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsaistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtlainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegQacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepdvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpitayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdr >6bm2_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=POL II ELONGATION COMPLEX WITH AN ABASIC LESION AT I-1 POSITION organism=? DNA sequence DC(T18) DA(T19) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) DG(T29) chainB (436) GLN531 0 5 0 0 0 0 0 0 0 0 0 prot.sequence desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsaistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtlainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegQacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepdvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpitayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdr >6bm4_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=POL II ELONGATION COMPLEX WITH AN ABASIC LESION AT I-1 POSITION,SOAKING UMPNPP organism=? DNA sequence DC(T18) DA(T19) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) DG(T29) chainA (791) ALA832 0 4 0 0 0 0 0 0 0 0 0 (792) GLU833 0 1 0 0 0 0 0 0 0 0 0 (795) TYR836 3 4 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcggcgntqptirkdglklvgswvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsieddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktAEtgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid >6bm4_AB: title=POL II ELONGATION COMPLEX WITH AN ABASIC LESION AT I-1 POSITION,SOAKING UMPNPP organism=? DNA sequence DC(T18) DA(T19) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) DG(T29) chainA (791) ALA832 0 4 0 0 0 0 0 0 0 0 0 (792) GLU833 0 1 0 0 0 0 0 0 0 0 0 (795) TYR836 3 4 0 0 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcggcgntqptirkdglklvgswvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsieddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktAEtgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsaistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtlainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepdvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvRVsgEdviigkttpitayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdr >6boq_A:DNase_I-like; title=HUMAN APE1 SUBSTRATE COMPLEX WITH AN A/A MISMATCH ADJACENT THE THF organism=Homo sapiens DNA sequence DG(D1):DC(V21) DC(D2):DG(V20) DT(D3):DA(V19) DG(D4):DC(V18) DA(D5):DT(V17) DT(D6):DA(V16) DG(D7):DC(V15) DC(D8):DG(V14) DG(D9):DC(V13) DA(D10):DA(V12) DV3(D11):DA(V11) DC(D12):DG(V10) DG(D13):DC(V9) DA(D14):DT(V8) DC(D15):DG(V7) DG(D16):DC(V6) DG(D17):DC(V5) DA(D18):DT(V4) DT(D19):DA(V3) DC(D20):DG(V2) DC(D21):DG(V1) chainA ( 56) LYS98 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (130) ARG177 0 0 0 0 0 0 0 0 0 16 2 20 0 0 0 0 0 0 0 0 0 (182) ASN229 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (222) TYR269 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (223) MET270 0 0 0 0 0 0 0 0 0 26 6 2 0 0 0 0 0 0 0 0 0 (224) MET271 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapdkegysgvgllsrqaplkvsygigdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMMnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6bor_A:DNase_I-like; title=HUMAN APE1 SUBSTRATE COMPLEX WITH AN G/G MISMATCH ADJACENT THE THF organism=Homo sapiens DNA sequence DG(P1):DC(V21) DC(P2):DG(V20) DT(P3):DA(V19) DG(P4):DC(V18) DA(P5):DT(V17) DT(P6):DA(V16) DG(P7):DC(V15) DC(P8):DG(V14) DG(P9):DC(V13) DG(P10):DG(V12) 3DR(P11):DA(V11) DC(P12):DG(V10) DG(P13):DC(V9) DA(P14):DT(V8) DC(P15):DG(V7) DG(P16):DC(V6) DG(P17):DC(V5) DA(P18):DT(V4) DT(P19):DA(V3) DC(P20):DG(V2) DC(P21):DG(V1) chainA ( 56) LYS98 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) TYR128 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ASN229 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (227) TYR269 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (228) MET270 0 0 0 0 0 0 0 0 0 38 4 0 0 0 0 0 0 0 0 0 0 (229) MET271 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqQtKcsenklpaelqelpglshqywsapsdkegYsgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagrglvrleyrqrwdeafrkflkglasrkplvlcgnlnvaheeidlrnpkgnkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMMnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6bos_A:DNase_I-like; title=HUMAN APE1 SUBSTRATE COMPLEX WITH AN A/C MISMATCH ADJACENT THE THF organism=Homo sapiens DNA sequence DG(V1):DC(P21) DG(V2):DC(P20) DA(V3):DT(P19) DT(V4):DA(P18) DC(V5):DG(P17) DC(V6):DG(P16) DG(V7):DC(P15) DT(V8):DA(P14) DC(V9):DG(P13) DG(V10):DC(P12) DA(V11):DV3(P11) DA(V12):DC(P10) DC(V13):DG(P9) DG(V14):DC(P8) DC(V15):DG(P7) DA(V16):DT(P6) DT(V17):DA(P5) DC(V18):DG(P4) DA(V19):DT(P3) DG(V20):DC(P2) DC(V21):DG(P1) chainA ( 56) LYS98 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 (134) ARG177 0 0 0 0 0 0 0 0 0 42 6 14 0 0 0 0 0 0 0 0 0 (183) ASN226 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (186) ASN229 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (226) TYR269 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (227) MET270 0 0 0 0 0 0 0 0 0 4 5 10 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkgysgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6bot_A:DNase_I-like; title=HUMAN APE1 SUBSTRATE COMPLEX WITH AN C/C MISMATCH ADJACENT THE THF organism=Homo sapiens DNA sequence DG(V1):DC(P21) DG(V2):DC(P20) DA(V3):DT(P19) DT(V4):DA(P18) DC(V5):DG(P17) DC(V6):DG(P16) DG(V7):DC(P15) DT(V8):DA(P14) DC(V9):DG(P13) DG(V10):DC(P12) DA(V11):DV3(P11) DC(V12):DC(P10) DC(V13):DG(P9) DG(V14):DC(P8) DC(V15):DG(P7) DA(V16):DT(P6) DT(V17):DA(P5) DC(V18):DG(P4) DA(V19):DT(P3) DG(V20):DC(P2) DC(V21):DG(P1) chainA ( 56) LYS98 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (126) ARG177 0 0 0 0 0 0 0 0 0 42 4 4 0 0 0 0 0 0 0 0 0 (178) ASN229 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (218) TYR269 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (219) MET270 0 0 0 0 0 0 0 0 0 2 4 2 0 0 0 0 0 0 0 0 0 (220) MET271 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsysgvgllsrqaplkvsygigqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMMnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6bou_A:DNase_I-like; title=HUMAN APE1 SUBSTRATE COMPLEX WITH AN T/C MISMATCH ADJACENT THE THF organism=Homo sapiens DNA sequence DG(P1):DC(V21) DC(P2):DG(V20) DT(P3):DA(V19) DG(P4):DC(V18) DA(P5):DT(V17) DT(P6):DA(V16) DG(P7):DC(V15) DC(P8):DG(V14) DG(P9):DC(V13) DC(P10):DT(V12) DV3(P11):DA(V11) DC(P12):DG(V10) DG(P13):DC(V9) DA(P14):DT(V8) DC(P15):DG(V7) DG(P16):DC(V6) DG(P17):DC(V5) DA(P18):DT(V4) DT(P19):DA(V3) DC(P20):DG(V2) DC(P21):DG(V1) chainA ( 56) LYS98 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) ARG177 0 0 0 0 0 0 0 0 0 4 4 23 0 0 0 0 0 0 0 0 0 (173) LYS224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 (178) ASN229 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (218) TYR269 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (219) MET270 0 0 0 0 0 0 0 0 0 4 2 1 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdgysgvgllsrqaplkvsygiegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpKgnkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6bov_A:DNase_I-like; title=HUMAN APE1 SUBSTRATE COMPLEX WITH AN A/G MISMATCH ADJACENT THE THF organism=Homo sapiens DNA sequence DG(V1):DC(P21) DG(V2):DC(P20) DA(V3):DT(P19) DT(V4):DA(P18) DC(V5):DG(P17) DC(V6):DG(P16) DG(V7):DC(P15) DT(V8):DA(P14) DC(V9):DG(P13) DG(V10):DC(P12) DA(V11):3DR(P11) DA(V12):DG(P10) DC(V13):DG(P9) DG(V14):DC(P8) DC(V15):DG(P7) DA(V16):DT(P6) DT(V17):DA(P5) DC(V18):DG(P4) DA(V19):DT(P3) DG(V20):DC(P2) DC(V21):DG(P1) chainA ( 56) LYS98 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (129) ARG177 0 0 0 0 0 0 0 0 0 56 2 8 0 0 0 0 0 0 0 0 0 (178) ASN226 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (181) ASN229 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 (221) TYR269 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (222) MET270 0 0 0 0 0 0 0 0 0 4 5 14 0 0 0 0 0 0 0 0 0 (223) MET271 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqqtKcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigegrvivaefdsfvlvtayvpnagRglvRleyrqrwdeafrkflkglasrkplvlcgnlnvaheeidlrnpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMMnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6bow_A:DNase_I-like; title=HUMAN APE1 SUBSTRATE COMPLEX WITH AN T/T MISMATCH ADJACENT THE THF organism=Homo sapiens DNA sequence DG(P1):DC(V21) DC(P2):DG(V20) DT(P3):DA(V19) DG(P4):DC(V18) DA(P5):DT(V17) DT(P6):DA(V16) DG(P7):DC(V15) DC(P8):DG(V14) DG(P9):DC(V13) DT(P10):DT(V12) DV3(P11):DA(V11) DC(P12):DG(V10) DG(P13):DC(V9) DA(P14):DT(V8) DC(P15):DG(V7) DG(P16):DC(V6) DG(P17):DC(V5) DA(P18):DT(V4) DT(P19):DA(V3) DC(P20):DG(V2) DC(P21):DG(V1) chainA ( 56) LYS98 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ARG177 0 0 0 0 0 0 0 0 0 6 2 26 0 0 0 0 0 0 0 0 0 (174) ASN226 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (177) ASN229 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (217) TYR269 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (218) MET270 0 0 0 0 0 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsgysgvgllsrqaplkvsygiegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6bqf_AB: title=POL II ELONGATION COMPLEX WITH 'DT-AP' AT I+1, I-1 POSITION organism=? DNA sequence DC(T18) DT(T19) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T27) DT(T28) DG(T29) chainA (795) TYR836 6 1 0 0 0 0 0 0 0 0 0 chainB prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcggcgntqptirkdglklvgswvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsieddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgYiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsaistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtlainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepdvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgEdviigkttpitayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdr >6brr_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3A (R836A)-DNMT3L IN COMPLEX WITH DNA CONTAINING TWO CPG SITES organism=HOMO SAPIENS DNA sequence DC(E423):DG(F446) DA(E424):DT(F445) DT(E425):DA(F444) DG(E426):DC(F443) DG(E428):DC(F441) DT(E429):DA(F440) DT(E430):DA(F439) DC(E431):DG(F438) DT(E432):DA(F437) DA(E433):DT(F436) DA(E434):DT(F435) DT(E435):DA(F434) DT(E436):DA(F433) DA(E437):DT(F432) DG(E438):DC(F431) DA(E439):DT(F430) DA(E440):DT(F429) DC(E441):DG(F428) DC(E443):DG(F426) DA(E444):DT(F425) DT(E445):DA(F424) DG(E446):DC(F423) chainA ( 88) ILE715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 ( 89) VAL716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 ( 90) ASN717 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 91) PRO718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (207) THR834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (208) THR835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (209) ALA836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (210) SER837 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 (211) ASN838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 prot.sequence aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVNParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTTASNsikqgkdqhfpvfmnekedilwctemervfgfpvhytdvsnmsrlarqrllgrswsvpvirhlfaplkeyfacv >6brr_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3A (R836A)-DNMT3L IN COMPLEX WITH DNA CONTAINING TWO CPG SITES organism=HOMO SAPIENS DNA sequence DC(F423):DG(E446) DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DG(F428):DC(E441) DT(F429):DA(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DA(F440):DT(E429) DC(F441):DG(E428) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainA ( 88) ILE715 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) VAL716 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ASN717 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) PRO718 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) THR834 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) THR835 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ALA836 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER837 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) ASN838 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 88) ILE715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 ( 89) VAL716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 ( 90) ASN717 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 91) PRO718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (207) THR834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (208) THR835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (209) ALA836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 (210) SER837 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 (211) ASN838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (256) LEU883 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 prot.sequence aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVNParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTTASNsikqgkdqhfpvfmnekedilwctemervfgfpvhytdvsnmsrlarqrllgrswsvpvirhlfaplkeyfacv/aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVNParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTTASNsikqgkdqhfpvfmnekedilwctemervfgfpvhytdvsnmsrLarqrllgrswsvpvirhlfaplkeyfacv >6brx_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE KAPPA IN COMPLEX WITH DNA CONTAINING THE MAJOR CISPLATIN LESION organism=Homo sapiens DNA sequence DG(T6):DC(P13) DT(T7):DA(P12) DG(T8):DC(P11) DT(T9):DA(P10) DA(T10):DT(P9) DT(T11):DA(P8) DG(T12):DC(P7) DT(T13):DA(P6) DA(T14):DT(P5) chainB (327) SER415 0 0 0 1 0 0 0 0 0 (331) GLU419 0 3 0 0 0 0 0 0 0 (424) ARG512 0 0 2 1 0 0 0 0 0 prot.sequence dkekinkiimeatkgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsmlstsnyharrfgvraampgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfiknsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthltrdgerkSmsvErtfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiklknvnfevktrastvssvvstaeeifaiakellkteidadfphplrlrlmgvRissfpn >6bs1_B:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE KAPPA IN COMPLEX WITH DNA CONTAINING THE MAJOR CISPLATIN LESION organism=Homo sapiens DNA sequence DA(P5):DT(T14) DT(P6):DA(T13) DA(P7):DT(T12) DC(P8):DG(T11) DA(P9):DT(T10) DT(P10):DA(T9) DA(P11):DT(T8) DC(P12):DG(T7) DC(P13):DG(T6) chainB (329) SER417 0 0 0 0 0 0 1 0 0 (331) GLU419 0 0 0 0 0 0 0 1 1 (381) THR469 0 0 0 2 0 0 0 0 0 (424) ARG512 0 0 0 0 0 0 1 0 0 prot.sequence dkekinkiimeatkgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsmlstsnyharrfgvraampgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfiknsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthltrdgerksmSvErtfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiklknvnfevkTrastvssvvstaeeifaiakellkteidadfphplrlrlmgvRissfpn >6bse_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR BOUND TO HIGH COOPERATIVITY MONOMER SEQUENCE organism=Saguinus oedipus DNA sequence DC(D2):DG(C16) DC(D3):DG(C15) DA(D4):DT(C14) DC(D5):DG(C13) DG(D6):DC(C12) DT(D7):DA(C11) DG(D8):DC(C10) DT(D9):DA(C9) DA(D10):DT(C8) DC(D11):DG(C7) DT(D12):DA(C6) DT(D13):DA(C5) DT(D14):DA(C4) DT(D15):DA(C3) DT(D16):DA(C2) chainA ( 26) LYS442 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 ( 27) VAL443 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 ( 30) LYS446 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 31) ARG447 0 0 0 0 0 13 12 1 0 0 0 0 0 0 0 prot.sequence hmklclvcsdeasgchygvltcgscKVffKRavegqhnylcagrndciidkirrkncpacryrkclqagmnle >6bse_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR BOUND TO HIGH COOPERATIVITY MONOMER SEQUENCE organism=Saguinus oedipus DNA sequence DA(C2):DT(D16) DA(C3):DT(D15) DA(C4):DT(D14) DA(C5):DT(D13) DA(C6):DT(D12) DG(C7):DC(D11) DT(C8):DA(D10) DA(C9):DT(D9) DC(C10):DG(D8) DA(C11):DT(D7) DC(C12):DG(D6) DG(C13):DC(D5) DT(C14):DA(D4) DG(C15):DC(D3) DG(C16):DC(D2) chainA ( 26) LYS442 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 ( 27) VAL443 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 30) LYS446 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 31) ARG447 0 0 0 0 0 0 0 1 12 13 0 0 0 0 0 chainB ( 25) VAL443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 29) ARG447 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 prot.sequence hmklclvcsdeasgchygvltcgscKVffKRavegqhnylcagrndciidkirrkncpacryrkclqagmnle/klclvcsdeasgchygvltcgsckVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >6bsg_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 RT COMPLEXED WITH RNA/DNA HYBRID IN AN RNA HYDROLYSIS-OFF MODE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(D2) DT(D3) DA(D4) DT(D5) DG(D6) DC(D7) DC(D8) DA(D9) DC(D10) DT(D11) DA(D12) DG(D13) DT(D14) DT(D15) DA(D16) DT(D17) DT(D18) DG(D19) DT(D20) DG(D21) DG(D22) DC(D23) DC(D24) chainA (218) MET230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (436) ARG448 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (462) ASN474 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (463) GLN475 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (489) TYR501 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (389) ASN418 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaiklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvntpplvklwyqlekepivgaetfyvdgaasRetklgkagyvtnkgrqkvvtltdttNQktelqaihlalqdsglevnivtdsqYalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagir/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdgtkwrklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvNtpplvklwyqlekep >6bsg_B:DNA/RNA_polymerases; title=STRUCTURE OF HIV-1 RT COMPLEXED WITH RNA/DNA HYBRID IN AN RNA HYDROLYSIS-OFF MODE organism=? DNA sequence DG(D2) DT(D3) DA(D4) DT(D5) DG(D6) DC(D7) DC(D8) DA(D9) DC(D10) DT(D11) DA(D12) DG(D13) DT(D14) DT(D15) DA(D16) DT(D17) DT(D18) DG(D19) DT(D20) DG(D21) DG(D22) DC(D23) DC(D24) chainB (389) ASN418 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdgtkwrklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvNtpplvklwyqlekep >6bsh_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 RT COMPLEXED WITH RNA/DNA HYBRID IN THE RNA HYDROLYSIS MODE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(D1) DT(D2) DA(D3) DT(D4) DG(D5) DC(D6) DC(D7) DA(D8) DC(D9) DT(D10) DA(D11) DG(D12) DT(D13) DT(D14) DA(D15) DT(D16) DT(D17) DG(D18) DT(D19) DG(D20) DG(D21) DC(D22) DC(D23) chainA ( 60) LYS73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (217) MET230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (435) ARG448 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (461) ASN474 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (462) GLN475 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (488) TYR501 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (389) ASN418 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfrKlvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvntpplvklwyqlekepivgaetfyvdgaasRetklgkagyvtnkgrqkvvtltdttNQktelqaihlalqdsglevnivtdsqYalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagir/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdgtkwrklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvNtpplvklwyqlekep >6bsh_B:DNA/RNA_polymerases; title=STRUCTURE OF HIV-1 RT COMPLEXED WITH RNA/DNA HYBRID IN THE RNA HYDROLYSIS MODE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(D1) DT(D2) DA(D3) DT(D4) DG(D5) DC(D6) DC(D7) DA(D8) DC(D9) DT(D10) DA(D11) DG(D12) DT(D13) DT(D14) DA(D15) DT(D16) DT(D17) DG(D18) DT(D19) DG(D20) DG(D21) DC(D22) DC(D23) chainB (389) ASN418 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdgtkwrklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvNtpplvklwyqlekep >6bsi_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 RT COMPLEXED WITH AN RNA/DNA HYBRID CONTAINING THE POLYPURINE-TRACT SEQUENCE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(D2) DT(D3) DT(D4) DT(D5) DT(D6) DT(D7) DC(D8) DT(D9) DT(D10) DT(D11) DT(D12) DG(D13) DT(D14) DT(D15) DA(D16) DT(D17) DT(D18) DG(D19) DT(D20) DG(D21) DG(D22) DC(D23) DC(D24) chainA (216) MET230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (347) HIS361 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) TRP406 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (491) ILE505 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgaHtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteyWqatwvpewefvntpplvklwyqlekepivgaetfyvdgaasretklgkagyvtnkgrqkvvtltdttnqktelqaihlalqdsglevnivtdsqyalgIiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagir >6bsi_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 RT COMPLEXED WITH AN RNA/DNA HYBRID CONTAINING THE POLYPURINE-TRACT SEQUENCE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(D2) DT(D3) DT(D4) DT(D5) DT(D6) DT(D7) DC(D8) DT(D9) DT(D10) DT(D11) DT(D12) DG(D13) DT(D14) DT(D15) DA(D16) DT(D17) DT(D18) DG(D19) DT(D20) DG(D21) DG(D22) DC(D23) DC(D24) chainA (216) MET230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (347) HIS361 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) TRP406 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (491) ILE505 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (390) ASN418 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgaHtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteyWqatwvpewefvntpplvklwyqlekepivgaetfyvdgaasretklgkagyvtnkgrqkvvtltdttnqktelqaihlalqdsglevnivtdsqyalgIiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagir/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikktkwrklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvNtpplvklwyqlekepi >6bsj_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 RT COMPLEXED WITH AN RNA/DNA HYBRID SEQUENCE NON- PREFERRED FOR RNA HYDROLYSIS organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(D2) DT(D3) DA(D4) DT(D5) DG(D6) DC(D7) DC(D8) DT(D9) DA(D10) DT(D11) DA(D12) DG(D13) DT(D14) DT(D15) DA(D16) DT(D17) DT(D18) DG(D19) DT(D20) DG(D21) DG(D22) DC(D23) DC(D24) chainA ( 59) LYS73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (216) MET230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (434) ARG448 0 0 0 0 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (461) GLN475 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (385) ASN418 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfKlvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvntpplvklwyqlekepivgaetfyvdgaasRetklgkagyvtnkgrqkvvtltdttnQktelqaihlalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagir/tvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkkwrklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarhtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvNtpplvklwyqlekep >6bsj_B:DNA/RNA_polymerases; title=STRUCTURE OF HIV-1 RT COMPLEXED WITH AN RNA/DNA HYBRID SEQUENCE NON- PREFERRED FOR RNA HYDROLYSIS organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(D2) DT(D3) DA(D4) DT(D5) DG(D6) DC(D7) DC(D8) DT(D9) DA(D10) DT(D11) DA(D12) DG(D13) DT(D14) DT(D15) DA(D16) DT(D17) DT(D18) DG(D19) DT(D20) DG(D21) DG(D22) DC(D23) DC(D24) chainB (385) ASN418 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkkwrklvdfrelnkktqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarhtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwvpewefvNtpplvklwyqlekep >6bte_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA I260Q BINARY COMPLEX organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 39 0 0 0 0 ( 26) LYS35 6 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlqpkdqyycgvlyftgsdifnknmrahalekgftineytirpltgvageplpvdsekdifdyiqwkyrepkdrse >6buz_A:Histone-fold; title=CRYO-EM STRUCTURE OF CENP-A NUCLEOSOME IN COMPLEX WITH KINETOCHORE PROTEIN CENP-N organism=HOMO SAPIENS DNA sequence DT(I-72):DA(J72) DC(I-71):DG(J71) DG(I-70):DC(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DC(I70):DG(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) chainA ( 21) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qgwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgl >6buz_H:Histone-fold; title=CRYO-EM STRUCTURE OF CENP-A NUCLEOSOME IN COMPLEX WITH KINETOCHORE PROTEIN CENP-N organism=? DNA sequence DT(J-72):DA(I72) DC(J-71):DG(I71) DG(J-70):DC(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DC(J70):DG(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) chainH ( 3) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6byy_AB:SRF-like; title=MEF2 CHIMERA/DNA COMPLEX organism=HOMO SAPIENS DNA sequence DT(L2):DA(K15) DC(L3):DG(K14) DT(L4):DA(K13) DT(L5):DA(K12) DA(L6):DT(K11) DT(L7):DA(K10) DA(L8):DT(K9) DA(L9):DT(K8) DA(L10):DT(K7) DT(L11):DA(K6) DA(L12):DT(K5) DG(L13):DC(K4) DT(L14):DA(K3) DT(L15):DA(K2) chainA ( 2) ARG3 0 0 0 0 0 0 0 0 0 4 15 11 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 5 2 0 0 chainB ( 2) ARG3 0 0 2 14 7 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 3 6 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntdiletlkrre/gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntdiletlkrre >6byy_C:SRF-like; title=MEF2 CHIMERA/DNA COMPLEX organism=? DNA sequence DA(E2):DT(F14) DC(E4):DG(F13) DT(E5):DA(F12) DA(E6):DT(F11) DT(E7):DA(F10) DT(E8):DA(F9) DT(E9):DA(F8) DA(E10):DT(F7) DT(E11):DA(F6) DA(E12):DT(F5) DA(E13):DT(F4) DG(E14):DC(F3) DA(E15):DT(F2) chainC ( 2) ARG3 0 0 0 0 0 0 0 0 1 6 11 1 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 2 1 0 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntdiletlkrre >6byy_CD:SRF-like; title=MEF2 CHIMERA/DNA COMPLEX organism=HOMO SAPIENS DNA sequence DT(F2):DA(E15) DC(F3):DG(E14) DT(F4):DA(E13) DT(F5):DA(E12) DA(F6):DT(E11) DT(F7):DA(E10) DA(F8):DT(E9) DA(F9):DT(E8) DA(F10):DT(E7) DT(F11):DA(E6) DA(F12):DT(E5) DG(F13):DC(E4) DT(F14):DA(E2) chainC ( 2) ARG3 0 1 11 6 1 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 1 2 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG3 0 0 0 0 0 0 0 0 0 4 8 3 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 6 1 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntdiletlkrre/gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntdiletlkr >6bz1_AB:SRF-like; title=MEF2 CHIMERA D83V MUTANT/DNA COMPLEX organism=HOMO SAPIENS DNA sequence DT(F3):DA(E14) DC(F4):DG(E13) DT(F5):DA(E12) DT(F6):DA(E11) DA(F7):DT(E10) DT(F8):DA(E9) DA(F9):DT(E8) DA(F10):DT(E7) DA(F11):DT(E6) DT(F12):DA(E5) DA(F13):DT(E4) DG(F14):DC(E3) DT(F15):DA(E2) chainA ( 2) ARG3 0 11 16 8 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 1 3 0 0 0 0 0 0 0 0 0 0 chainB ( 2) ARG3 0 0 0 0 0 0 0 0 2 11 7 1 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 4 1 1 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntviletlkr/gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntviletlkr >6bz1_CD:SRF-like; title=MEF2 CHIMERA D83V MUTANT/DNA COMPLEX organism=HOMO SAPIENS DNA sequence DA(G3):DT(H14) DC(G4):DG(H13) DT(G5):DA(H12) DA(G6):DT(H11) DT(G7):DA(H10) DT(G8):DA(H9) DT(G9):DA(H8) DA(G10):DT(H7) DT(G11):DA(H6) DA(G12):DT(H5) DA(G13):DT(H4) DG(G14):DC(H3) DA(G15):DT(H2) chainC ( 2) ARG3 0 0 0 0 0 0 0 0 8 11 12 0 0 ( 18) VAL19 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 22) LYS23 0 0 0 0 0 0 0 0 0 8 0 0 0 chainD ( 2) ARG3 0 3 9 11 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 2 8 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqitrimdernrqVtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntviletlkrr/gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntviletl >6bz1_D:SRF-like; title=MEF2 CHIMERA D83V MUTANT/DNA COMPLEX organism=HOMO SAPIENS DNA sequence DA(G3):DT(H14) DC(G4):DG(H13) DT(G5):DA(H12) DA(G6):DT(H11) DT(G7):DA(H10) DT(G8):DA(H9) DT(G9):DA(H8) DA(G10):DT(H7) DT(G11):DA(H6) DA(G12):DT(H5) DA(G13):DT(H4) DG(G14):DC(H3) DA(G15):DT(H2) chainD ( 2) ARG3 0 3 9 11 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 2 8 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntviletl >6bzo_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=MTB RNAP HOLO/RBPA/FIDAXOMICIN/UPSTREAM FORK DNA organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DG(O1):DC(P26) DC(O2):DG(P25) DT(O3):DA(P24) DT(O4):DA(P23) DG(O5):DC(P22) DA(O6):DT(P21) DC(O7):DG(P20) DA(O8):DT(P19) DA(O9):DT(P18) DA(O10):DT(P17) DA(O11):DT(P16) DG(O12):DC(P15) DT(O13):DA(P14) DG(O14):DC(P13) DT(O15):DA(P12) DT(O16):DA(P11) DA(O17):DT(P10) DA(O18):DT(P9) DA(O19):DT(P8) DT(O20):DA(P7) DT(O21):DA(P6) DG(O22):DC(P5) DT(O23):DA(P4) DG(O24):DC(P3) DC(O25):DG(P2) DT(O26):DA(P1) chainF (148) TRP349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (149) TRP350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (152) GLN353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 (156) ARG357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 4 0 (169) VAL370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 (170) HIS371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (173) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 (288) LEU489 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) THR499 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG500 0 0 0 0 0 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) GLU501 0 0 6 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ARG502 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) ARG504 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) GLN505 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fvwdedesealrqarkdaeltasadsvraylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatWWirQaitRamadqartiripVHmvEvinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtLdeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyl >6c04_CD: title=MTB RNAP HOLO/RBPA/DOUBLE FORK DNA -CLOSED CLAMP organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DA(G1):DT(H26) DG(G2):DC(H25) DC(G3):DG(H24) DA(G4):DT(H23) DC(G5):DG(H22) DA(G6):DT(H21) DA(G7):DT(H20) DT(G8):DA(H19) DT(G9):DA(H18) DT(G10):DA(H17) DA(G11):DT(H16) DA(G12):DT(H15) DC(G13):DG(H14) DA(G14):DT(H13) DC(G15):DG(H12) DT(G16):DA(H11) DT(G17):DA(H10) DT(G18):DA(H9) chainC (438) ARG467 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (289) GLN287 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlss/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmitgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa >6c1a_AB:DNA-binding_domain; title=MBD2 IN COMPLEX WITH METHYLATED DNA organism=Homo sapiens DNA sequence DC(C1):DG(D12) DG(C2):DC(D11) DG(C3):DC(D10) DA(C4):DT(D9) DA(C5):DT(D8) DT(C6):DA(D7) DG(C7):5CM(D6) DT(C8):DA(D5) DA(C9):DT(D4) DG(C10):DC(D3) DG(C11):DC(D2) DC(C12):DG(D1) chainA ( 20) ARG166 0 0 0 0 0 16 14 4 0 0 0 0 ( 30) ASP176 0 0 0 0 0 3 0 0 0 0 0 0 ( 32) TYR178 0 0 0 0 0 1 0 0 0 0 0 0 ( 42) ARG188 0 0 0 0 0 0 1 0 0 0 0 0 chainB ( 19) ARG166 18 14 3 0 0 0 0 0 0 0 0 0 ( 29) ASP176 6 1 1 0 0 0 0 0 0 0 0 0 ( 41) ARG188 11 13 0 0 0 0 0 0 0 0 0 0 prot.sequence gkrmdcpalppgwkkeeviRksglsagksDvYyfspsgkkfrskpqlarylgntvdlssfdfrtgkmm/krmdcpalppgwkkeeviRksglsagksDvyyfspsgkkfRskpqlarylgntvdlssfdfrtgkmm >6c1a_E:DNA-binding_domain; title=MBD2 IN COMPLEX WITH METHYLATED DNA organism=Homo sapiens DNA sequence DG(H1):DC(G12) DC(H2):DG(G11) DC(H3):DG(G10) DT(H4):DA(G9) DA(H5):DT(G8) 5CM(H6):DG(G7) DA(H7):DT(G6) DT(H8):DA(G5) DT(H9):DA(G4) DC(H10):DG(G3) DC(H11):DG(G2) DG(H12):DC(G1) chainE ( 19) ARG166 0 0 0 0 3 12 16 0 0 0 0 0 ( 24) SER171 0 0 0 0 1 0 0 0 0 0 0 0 ( 29) ASP176 0 0 0 0 0 1 3 0 0 0 0 0 ( 31) TYR178 0 0 0 0 0 0 1 0 0 0 0 0 ( 41) ARG188 0 0 0 0 0 1 0 3 5 0 0 0 prot.sequence krmdcpalppgwkkeeviRksglSagksDvYyfspsgkkfRskpqlarylgntvdlssfdfrtgkmmp >6c1a_EF:DNA-binding_domain; title=MBD2 IN COMPLEX WITH METHYLATED DNA organism=Homo sapiens DNA sequence DC(G1):DG(H12) DG(G2):DC(H11) DG(G3):DC(H10) DA(G4):DT(H9) DA(G5):DT(H8) DT(G6):DA(H7) DG(G7):5CM(H6) DT(G8):DA(H5) DA(G9):DT(H4) DG(G10):DC(H3) DG(G11):DC(H2) DC(G12):DG(H1) chainE ( 19) ARG166 0 0 0 0 0 16 12 3 0 0 0 0 ( 24) SER171 0 0 0 0 0 0 0 1 0 0 0 0 ( 29) ASP176 0 0 0 0 0 3 1 0 0 0 0 0 ( 31) TYR178 0 0 0 0 0 1 0 0 0 0 0 0 ( 41) ARG188 0 0 0 5 3 0 1 0 0 0 0 0 chainF ( 19) ARG166 18 14 3 0 0 0 0 0 0 0 0 0 ( 29) ASP176 8 1 0 0 0 0 0 0 0 0 0 0 ( 31) TYR178 1 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG188 12 12 0 0 0 0 0 0 0 0 0 0 prot.sequence krmdcpalppgwkkeeviRksglSagksDvYyfspsgkkfRskpqlarylgntvdlssfdfrtgkmmp/krmdcpalppgwkkeeviRksglsagksDvYyfspsgkkfRskpqlarylgntvdlssfdfrtgkmmp >6c1t_AD:DNA-binding_domain; title=MBD2 IN COMPLEX WITH A PARTIALLY METHYLATED DNA organism=Homo sapiens DNA sequence DC(C1):DG(B12) DG(C2):DC(B11) DG(C3):DC(B10) DA(C4):DT(B9) DG(C5):DC(B8) DT(C6):DA(B7) DG(C7):5CM(B6) DT(C8):DA(B5) DA(C9):DT(B4) DG(C10):DC(B3) DG(C11):DC(B2) DC(C12):DG(B1) chainA ( 19) ARG166 0 0 0 0 0 15 12 5 0 0 0 0 ( 29) ASP176 0 0 0 0 0 3 0 0 0 0 0 0 ( 31) TYR178 0 0 0 0 2 1 0 0 0 0 0 0 ( 41) ARG188 0 0 0 5 8 2 2 0 0 0 0 0 chainD ( 18) ARG166 17 13 3 0 0 0 0 0 0 0 0 0 ( 28) ASP176 4 1 0 0 0 0 0 0 0 0 0 0 ( 40) ARG188 13 11 0 0 0 0 0 0 0 0 0 0 prot.sequence krmdcpalppgwkkeeviRksglsagksDvYyfspsgkkfRskpqlarylgntvdlssfdfrtgkmm/rmdcpalppgwkkeeviRksglsagksDvYyfspsgkkfRskpqlarylgntvdlssfdfrtgkmm >6c1t_D:DNA-binding_domain; title=MBD2 IN COMPLEX WITH A PARTIALLY METHYLATED DNA organism=Homo sapiens DNA sequence DC(C1):DG(B12) DG(C2):DC(B11) DG(C3):DC(B10) DA(C4):DT(B9) DG(C5):DC(B8) DT(C6):DA(B7) DG(C7):5CM(B6) DT(C8):DA(B5) DA(C9):DT(B4) DG(C10):DC(B3) DG(C11):DC(B2) DC(C12):DG(B1) chainD ( 18) ARG166 17 13 3 0 0 0 0 0 0 0 0 0 ( 28) ASP176 4 1 0 0 0 0 0 0 0 0 0 0 ( 40) ARG188 13 11 0 0 0 0 0 0 0 0 0 0 prot.sequence rmdcpalppgwkkeeviRksglsagksDvYyfspsgkkfRskpqlarylgntvdlssfdfrtgkmm >6c1u_A:DNA-binding_domain; title=MBD2 IN COMPLEX WITH A DEOXY-OLIGONUCLEOTIDE organism=Homo sapiens DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DC(D3):DG(C10) DC(D4):DG(C9) DA(D5):DT(C8) 5CM(D6):DG(C7) DA(D7):DT(C6) DC(D8):DG(C5) DT(D9):DA(C4) DC(D10):DG(C3) DC(D11):DG(C2) DG(D12):DC(C1) chainA ( 20) ARG166 0 0 0 0 0 12 19 0 0 0 0 0 ( 30) ASP176 0 0 0 0 0 0 3 0 0 0 0 0 ( 32) TYR178 0 0 0 0 0 0 1 2 0 0 0 0 ( 40) LYS186 0 0 0 0 0 0 0 0 1 0 0 0 ( 42) ARG188 0 0 0 0 0 2 2 7 6 0 0 0 prot.sequence gkrmdcpalppgwkkeeviRksglsagksDvYyfspsgkKfRskpqlarylgntvdlssfdfrtgkmm >6c1u_AB:DNA-binding_domain; title=MBD2 IN COMPLEX WITH A DEOXY-OLIGONUCLEOTIDE organism=Homo sapiens DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DC(D3):DG(C10) DC(D4):DG(C9) DA(D5):DT(C8) 5CM(D6):DG(C7) DA(D7):DT(C6) DC(D8):DG(C5) DT(D9):DA(C4) DC(D10):DG(C3) DC(D11):DG(C2) DG(D12):DC(C1) chainA ( 20) ARG166 0 0 0 0 0 12 19 0 0 0 0 0 ( 30) ASP176 0 0 0 0 0 0 3 0 0 0 0 0 ( 32) TYR178 0 0 0 0 0 0 1 2 0 0 0 0 ( 40) LYS186 0 0 0 0 0 0 0 0 1 0 0 0 ( 42) ARG188 0 0 0 0 0 2 2 7 6 0 0 0 chainB ( 19) ARG166 0 0 0 0 0 0 0 0 0 3 14 21 ( 29) ASP176 0 0 0 0 0 0 0 0 0 1 1 4 ( 41) ARG188 0 0 0 0 0 0 0 0 0 0 15 12 prot.sequence gkrmdcpalppgwkkeeviRksglsagksDvYyfspsgkKfRskpqlarylgntvdlssfdfrtgkmm/krmdcpalppgwkkeeviRksglsagksDvyyfspsgkkfRskpqlarylgntvdlssfdfrtgkmmp >6c1u_EF:DNA-binding_domain; title=MBD2 IN COMPLEX WITH A DEOXY-OLIGONUCLEOTIDE organism=Homo sapiens DNA sequence DC(G1):DG(H12) DG(G2):DC(H11) DG(G3):DC(H10) DA(G4):DT(H9) DG(G5):DC(H8) DT(G6):DA(H7) DG(G7):5CM(H6) DT(G8):DA(H5) DG(G9):DC(H4) DG(G10):DC(H3) DG(G11):DC(H2) DC(G12):DG(H1) chainE ( 20) ARG166 0 0 0 0 0 23 14 0 0 0 0 0 ( 30) ASP176 0 0 0 0 0 3 0 0 0 0 0 0 ( 32) TYR178 0 0 0 0 2 1 0 0 0 0 0 0 ( 40) LYS186 0 0 0 1 0 0 0 0 0 0 0 0 ( 42) ARG188 0 0 0 6 7 2 2 0 0 0 0 0 chainF ( 20) ARG166 19 14 4 0 0 0 0 0 0 0 0 0 ( 30) ASP176 3 1 1 0 0 0 0 0 0 0 0 0 ( 32) TYR178 1 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG188 11 12 0 0 0 0 0 0 0 0 0 0 prot.sequence gkrmdcpalppgwkkeeviRksglsagksDvYyfspsgkKfRskpqlarylgntvdlssfdfrtgkmmp/gkrmdcpalppgwkkeeviRksglsagksDvYyfspsgkkfRskpqlarylgntvdlssfdfrtgkmm >6c1v_A:DNA-binding_domain; title=MBD2 IN COMPLEX WITH DOUBLE-STRANDED DNA organism=Homo sapiens DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DC(D3):DG(C10) DT(D4):DA(C9) DA(D5):DT(C8) DC(D6):DG(C7) DA(D7):DT(C6) DC(D8):DG(C5) DT(D9):DA(C4) DC(D10):DG(C3) DC(D11):DG(C2) DG(D12):DC(C1) chainA ( 19) ARG166 0 0 0 0 3 11 17 0 0 0 0 0 ( 29) ASP176 0 0 0 0 0 0 3 0 0 0 0 0 ( 31) TYR178 0 0 0 0 0 0 1 2 0 0 0 0 ( 39) LYS186 0 0 0 0 0 0 0 0 1 0 0 0 ( 41) ARG188 0 0 0 0 0 1 3 8 4 0 0 0 prot.sequence krmdcpalppgwkkeeviRksglsagksDvYyfspsgkKfRskpqlarylgntvdlssfdfrtgkmmp >6c1v_AB:DNA-binding_domain; title=MBD2 IN COMPLEX WITH DOUBLE-STRANDED DNA organism=Homo sapiens DNA sequence DC(C1):DG(D12) DG(C2):DC(D11) DG(C3):DC(D10) DA(C4):DT(D9) DG(C5):DC(D8) DT(C6):DA(D7) DG(C7):DC(D6) DT(C8):DA(D5) DA(C9):DT(D4) DG(C10):DC(D3) DG(C11):DC(D2) DC(C12):DG(D1) chainA ( 19) ARG166 0 0 0 0 0 17 11 3 0 0 0 0 ( 29) ASP176 0 0 0 0 0 3 0 0 0 0 0 0 ( 31) TYR178 0 0 0 0 2 1 0 0 0 0 0 0 ( 39) LYS186 0 0 0 1 0 0 0 0 0 0 0 0 ( 41) ARG188 0 0 0 4 8 3 1 0 0 0 0 0 chainB ( 20) ARG166 18 13 3 0 0 0 0 0 0 0 0 0 ( 30) ASP176 5 1 1 0 0 0 0 0 0 0 0 0 ( 42) ARG188 12 14 0 0 0 0 0 0 0 0 0 0 prot.sequence krmdcpalppgwkkeeviRksglsagksDvYyfspsgkKfRskpqlarylgntvdlssfdfrtgkmmp/gkrmdcpalppgwkkeeviRksglsagksDvYyfspsgkkfRskpqlarylgntvdlssfdfrtgkmm >6c1v_EF:DNA-binding_domain; title=MBD2 IN COMPLEX WITH DOUBLE-STRANDED DNA organism=Homo sapiens DNA sequence DG(H1):DC(G12) DC(H2):DG(G11) DC(H3):DG(G10) DT(H4):DA(G9) DA(H5):DT(G8) DC(H6):DG(G7) DA(H7):DT(G6) DC(H8):DG(G5) DT(H9):DA(G4) DC(H10):DG(G3) DC(H11):DG(G2) DG(H12):DC(G1) chainE ( 19) ARG166 0 0 0 0 3 11 17 0 0 0 0 0 ( 29) ASP176 0 0 0 0 0 0 3 0 0 0 0 0 ( 31) TYR178 0 0 0 0 0 0 2 2 0 0 0 0 ( 41) ARG188 0 0 0 0 0 0 2 7 4 0 0 0 chainF ( 19) ARG166 0 0 0 0 0 0 0 0 0 3 13 18 ( 29) ASP176 0 0 0 0 0 0 0 0 0 1 1 3 ( 41) ARG188 0 0 0 0 0 0 0 0 0 0 14 12 prot.sequence krmdcpalppgwkkeeviRksglsagksDvYyfspsgkkfRskpqlarylgntvdlssfdfrtgkmmp/krmdcpalppgwkkeeviRksglsagksDvyyfspsgkkfRskpqlarylgntvdlssfdfrtgkmmp >6c1y_B:DNA-binding_domain; title=MBD OF HUMAN MECP2 IN COMPLEX WITH METHYLATED DNA organism=HOMO SAPIENS DNA sequence DG(F1):DC(E12) DC(F2):DG(E11) DC(F3):DG(E10) DA(F4):DT(E9) DC(F5):DG(E8) 5CM(F6):DG(E7) DG(F7):5CM(E6) DG(F8):DC(E5) DT(F9):DA(E4) DG(F10):DC(E3) DG(F11):DC(E2) DC(F12):DG(E1) chainB ( 20) ARG111 0 0 0 0 0 14 22 0 0 0 0 0 ( 30) ASP121 0 0 0 0 0 1 4 0 0 0 0 0 ( 42) ARG133 0 0 0 0 0 20 13 1 0 0 0 0 ( 43) SER134 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence gpmyddptlpegwtrklkqRksgrsagkydvylinpqgkafRskveliayfekvgdtsldpndfdftvtgr >6c2f_J:DNA-binding_domain; title=MBD2 IN COMPLEX WITH METHYLATED DNA organism=Homo sapiens DNA sequence DG(L1):DC(K12) DC(L2):DG(K11) DT(L3):DA(K10) DA(L4):DT(K9) DC(L5):DG(K8) DC(L6):DG(K7) DG(L7):5CM(K6) DG(L8):DC(K5) DT(L9):DA(K4) DC(L10):DG(K3) DT(L11):DA(K2) DC(L12):DG(K1) chainJ ( 19) ARG166 0 0 0 0 0 10 10 1 0 0 0 0 ( 29) ASP176 0 0 0 0 0 1 0 0 0 0 0 0 ( 31) TYR178 0 0 0 0 1 0 0 0 0 0 0 0 ( 41) ARG188 0 0 0 0 3 12 19 0 0 0 0 0 prot.sequence krmdcpalppgwkkeeviRksglsagksDvYyfspsgkkfRskpqlarylgntvdlssfdfrtgkmm >6c2s_AD:"Winged_helix"_DNA-binding_domain; title=TRANSCRIPTIONAL REPRESSOR, COUR, BOUND TO A 23-MER DNA DUPLEX organism=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) / Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) / Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) / Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) DNA sequence DT(V1):DA(U23) DA(V2):DT(U22) DT(V3):DA(U21) DA(V4):DT(U20) DG(V5):DC(U19) DT(V6):DA(U18) DT(V7):DA(U17) DA(V8):DT(U16) DT(V9):DA(U15) DA(V10):DT(U14) DG(V11):DC(U13) DA(V12):DT(U12) DG(V13):DC(U11) DT(V14):DA(U10) DA(V15):DT(U9) DT(V16):DA(U8) DA(V17):DT(U7) DA(V18):DT(U6) DC(V19):DG(U5) DA(V20):DT(U4) DA(V21):DT(U3) DT(V22):DA(U2) DA(V23):DT(U1) chainA ( 65) LEU104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 66) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 67) PRO106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 5 0 0 0 0 0 ( 68) ASN107 0 0 0 0 0 0 0 0 0 0 0 0 0 15 11 0 0 0 0 0 0 0 0 ( 70) VAL109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 ( 92) ARG131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 chainD ( 65) LEU104 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG105 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PRO106 0 0 0 0 0 3 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ASN107 0 0 0 0 0 0 0 0 10 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) VAL109 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG131 2 11 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence selkmgelsellgyalkraqlrvfedflhcvapvqltpaqfsvlllldanpgrnqteiattlgiLRPNfVamldalegrglcvrtrspsdrRshilmltdkgratlarakklvatrhedrltellgrdnrdallsmlatiar/selkmgelsellgyalkraqlrvfedflhcvapvqltpaqfsvlllldanpgrnqteiattlgiLRPNfVamldalegrglcvrtrspsdrRshilmltdkgratlarakklvatrhedrltellgrdnrdallsmlatiar >6c2s_BC:"Winged_helix"_DNA-binding_domain; title=TRANSCRIPTIONAL REPRESSOR, COUR, BOUND TO A 23-MER DNA DUPLEX organism=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) / Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) / Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) / Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) DNA sequence DT(X1):DA(Y23) DA(X2):DT(Y22) DT(X3):DA(Y21) DT(X4):DA(Y20) DG(X5):DC(Y19) DT(X6):DA(Y18) DT(X7):DA(Y17) DA(X8):DT(Y16) DT(X9):DA(Y15) DA(X10):DT(Y14) DC(X11):DG(Y13) DT(X12):DA(Y12) DC(X13):DG(Y11) DT(X14):DA(Y10) DA(X15):DT(Y9) DT(X16):DA(Y8) DA(X17):DT(Y7) DA(X18):DT(Y6) DC(X19):DG(Y5) DT(X20):DA(Y4) DA(X21):DT(Y3) DT(X22):DA(Y2) DA(X23):DT(Y1) chainB ( 65) LEU104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 66) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 67) PRO106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 2 0 0 0 0 0 ( 68) ASN107 0 0 0 0 0 0 0 0 0 0 0 0 0 14 10 0 0 0 0 0 0 0 0 ( 70) VAL109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 92) ARG131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 chainC ( 65) LEU104 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG105 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PRO106 0 0 0 0 0 6 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ASN107 0 0 0 0 0 0 0 0 9 15 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) VAL109 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG131 0 9 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence selkmgelsellgyalkraqlrvfedflhcvapvqltpaqfsvlllldanpgrnqteiattlgiLRPNfVamldalegrglcvrtrspsdrRshilmltdkgratlarakklvatrhedrltellgrdnrdallsmlatiar/selkmgelsellgyalkraqlrvfedflhcvapvqltpaqfsvlllldanpgrnqteiattlgiLRPNfVamldalegrglcvrtrspsdrRshilmltdkgratlarakklvatrhedrltellgrdnrdallsmlatiar >6c2s_C:"Winged_helix"_DNA-binding_domain; title=TRANSCRIPTIONAL REPRESSOR, COUR, BOUND TO A 23-MER DNA DUPLEX organism=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) / Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) DNA sequence DT(Y1):DA(X23) DA(Y2):DT(X22) DT(Y3):DA(X21) DA(Y4):DT(X20) DG(Y5):DC(X19) DT(Y6):DA(X18) DT(Y7):DA(X17) DA(Y8):DT(X16) DT(Y9):DA(X15) DA(Y10):DT(X14) DG(Y11):DC(X13) DA(Y12):DT(X12) DG(Y13):DC(X11) DT(Y14):DA(X10) DA(Y15):DT(X9) DT(Y16):DA(X8) DA(Y17):DT(X7) DA(Y18):DT(X6) DC(Y19):DG(X5) DA(Y20):DT(X4) DA(Y21):DT(X3) DT(Y22):DA(X2) DA(Y23):DT(X1) chainC ( 65) LEU104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 66) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 67) PRO106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 6 0 0 0 0 0 ( 68) ASN107 0 0 0 0 0 0 0 0 0 0 0 0 0 15 9 0 0 0 0 0 0 0 0 ( 70) VAL109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 92) ARG131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 9 0 prot.sequence selkmgelsellgyalkraqlrvfedflhcvapvqltpaqfsvlllldanpgrnqteiattlgiLRPNfVamldalegrglcvrtrspsdrRshilmltdkgratlarakklvatrhedrltellgrdnrdallsmlatiar >6c31_A:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=CRYSTAL STRUCTURE OF TETR FAMILY PROTEIN RV0078 IN COMPLEX WITH DNA organism=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) DNA sequence DA(K4):DT(L20) DC(K5):DG(L19) DA(K6):DT(L18) DA(K7):DT(L17) DG(K8):DC(L16) DC(K9):DG(L15) DA(K10):DT(L14) DG(K11):DC(L13) DA(K12):DT(L12) DC(K13):DG(L11) DT(K14):DA(L10) DG(K15):DC(L9) DC(K16):DG(L8) DC(K17):DG(L7) DG(K18):DC(L6) DG(K19):DC(L5) DT(K20):DA(L4) DA(K21):DT(L3) DA(K22):DT(L2) DC(K23):DG(L1) chainA ( 3) GLN8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 33) PRO38 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 42) THR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 43) ARG48 0 0 0 0 0 0 0 0 0 0 10 12 2 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 ( 48) HIS53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 prot.sequence rtQeersaatrealitgarklwglrgyaevgtPeiateagvTRgamYHqfadkaalfrdvvevveqdvmarmatlvaasgaatpadairaavdawlevsgdpevrqlilldapvvlgwagfrdvaqryslgmteqliteairagqlarqpvrplaqvligaldeaamfiataddpkrarretrqvlrrlidgmln >6c31_ABCD:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=CRYSTAL STRUCTURE OF TETR FAMILY PROTEIN RV0078 IN COMPLEX WITH DNA organism=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) DNA sequence DG(L1):DC(K23) DT(L2):DA(K22) DT(L3):DA(K21) DA(L4):DT(K20) DC(L5):DG(K19) DC(L6):DG(K18) DG(L7):DC(K17) DG(L8):DC(K16) DC(L9):DG(K15) DA(L10):DT(K14) DG(L11):DC(K13) DT(L12):DA(K12) DC(L13):DG(K11) DT(L14):DA(K10) DG(L15):DC(K9) DC(L16):DG(K8) DT(L17):DA(K7) DT(L18):DA(K6) DG(L19):DC(K5) DT(L20):DA(K4) chainA ( 3) GLN8 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) PRO38 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 42) THR47 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG48 0 0 0 0 0 0 0 2 12 10 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 ( 48) HIS53 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 3) GLN8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 ( 42) THR47 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 43) ARG48 0 0 0 0 0 0 0 0 0 8 9 1 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 ( 48) HIS53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 chainC ( 42) ARG48 0 0 0 0 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) TYR52 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) HIS53 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 42) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 ( 46) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 ( 47) HIS53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 prot.sequence rtQeersaatrealitgarklwglrgyaevgtPeiateagvTRgamYHqfadkaalfrdvvevveqdvmarmatlvaasgaatpadairaavdawlevsgdpevrqlilldapvvlgwagfrdvaqryslgmteqliteairagqlarqpvrplaqvligaldeaamfiataddpkrarretrqvlrrlidgmln/rtQeersaatrealitgarklwglrgyaevgtpeiateagvTRgamYHqfadkaalfrdvvevveqdvmarmatlvaasgaatpadairaavdawlevsgdpevrqlilldapvvlgwagfrdvaqryslgmteqliteairagqlarqpvrplaqvligaldeaamfiataddpkrarretrqvlrrlidgmln/tqeersaatrealitgarklwglrgyaevgtpeiateagvtRgamYHqfadkaalfrdvvevveqdvmarmatlvaasgaatpadairaavdawlevsgdpevrqlilldapvvlgwagfrdvaqryslgmteqliteairagqlarqpvrplaqvligaldeaamfiataddpkrarretrqvlrrlidgmln/tqeersaatrealitgarklwglrgyaevgtpeiateagvtRgamYHqfadkaalfrdvvevveqdvmarmatlvaasgaatpadairaavdawlevsgdpevrqlilldapvvlgwagfrdvaqryslgmteqliteairagqlarqpvrplaqvligaldeaamfiataddpkrarretrqvlrrlidgmln >6c31_EFGH:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=CRYSTAL STRUCTURE OF TETR FAMILY PROTEIN RV0078 IN COMPLEX WITH DNA organism=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) DNA sequence DA(I4):DT(J20) DC(I5):DG(J19) DA(I6):DT(J18) DA(I7):DT(J17) DG(I8):DC(J16) DC(I9):DG(J15) DA(I10):DT(J14) DG(I11):DC(J13) DA(I12):DT(J12) DC(I13):DG(J11) DT(I14):DA(J10) DG(I15):DC(J9) DC(I16):DG(J8) DC(I17):DG(J7) DG(I18):DC(J6) DG(I19):DC(J5) DT(I20):DA(J4) DA(I21):DT(J3) DA(I22):DT(J2) DC(I23):DG(J1) chainE ( 3) GLN8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 33) PRO38 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 42) THR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 43) ARG48 0 0 0 0 0 0 0 0 0 0 12 11 1 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 ( 48) HIS53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 chainF ( 3) GLN8 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR47 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG48 0 0 0 0 0 0 0 0 2 12 6 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 ( 48) HIS53 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 43) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 chainH ( 32) PRO38 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG48 0 0 0 0 0 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) TYR52 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) HIS53 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rtQeersaatrealitgarklwglrgyaevgtPeiateagvTRgamYHqfadkaalfrdvvevveqdvmarmatlvaasgaatpadairaavdawlevsgdpevrqlilldapvvlgwagfrdvaqryslgmteqliteairagqlarqpvrplaqvligaldeaamfiataddpkrarretrqvlrrlidgmln/rtQeersaatrealitgarklwglrgyaevgtpeiateagvTRgamYHqfadkaalfrdvvevveqdvmarmatlvaasgaatpadairaavdawlevsgdpevrqlilldapvvlgwagfrdvaqryslgmteqliteairagqlarqpvrplaqvligaldeaamfiataddpkrarretrqvlrrlidgmln/rtqeersaatrealitgarklwglrgyaevgtpeiateagvtRgamYhqfadkaalfrdvvevveqdvmarmatlvaasgaatpadairaavdawlevsgdpevrqlilldapvvlgwagfrdvaqryslgmteqliteairagqlarqpvrplaqvligaldeaamfiataddpkrarretrqvlrrlidgmln/tqeersaatrealitgarklwglrgyaevgtPeiateagvtRgamYHqfadkaalfrdvvevveqdvmarmatlvaasgaatpadairaavdawlevsgdpevrqlilldapvvlgwagfrdvaqryslgmteqliteairagqlarqpvrplaqvligaldeaamfiataddpkrarretrqvlrrlidgmln >6c66_AIKM:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRISPR RNA-GUIDED SURVEILLANCE COMPLEX, PRE-NICKING organism=THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) DNA sequence DT(L16):DA(N50) DC(L17):DG(N49) DC(L18):DG(N48) DA(L19):DT(N47) DG(L20):DC(N46) DG(L21):DC(N45) DC(L22):DG(N44) DG(L23):DC(N43) DA(L24):DT(N42) DC(L25):DG(N41) DA(L26):DT(N40) DG(L27):DC(N39) DC(L28):DG(N38) DC(L29):DG(N37) DC(L30):DG(N36) DA(L31):DT(N35) DC(L32):DG(N34) DA(L33):DT(N33) DT(L34):DA(N32) DG(L35):DC(N31) DG(L36):DC(N30) DC(L37):DA(N21) DA(L38):DA(N20) DT(L39):DT(N19) DT(L40):DA(N14) DC(L41):DC(N13) DC(L42):DC(N12) DA(L43):DG(N11) DC(L44):DA(N10) DT(L45):DA(N9) DT(L46):DG(N8) DA(L47):DC(N7) DT(L48):DA(N6) DC(L49):DG(N5) DA(L50):DG(N4) DC(L51):DC(N3) DT(L52):DG(N2) DG(L53):DC(N1) chainA (178) SER194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (180) MET196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 0 0 (192) ARG208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (302) SER318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ARG322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 (308) TYR324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) GLN384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 20 0 0 0 0 0 0 0 0 0 0 (369) ALA385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (490) ARG522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (492) ARG524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (508) TRP540 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (510) PRO542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI ( 1) TYR5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ALA26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ALA29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) ARG160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (130) TYR182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 (133) SER185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainK ( 14) ARG16 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ALA26 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ALA29 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG33 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) TYR182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM (171) ARG172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ppsfdvtiapwliarsrdvlaapemlglrdvlirshelsdveiplppgaavlwrilalitaritgldqppnknpkrkwqarrsqilskgrldpeavdayfadyserfdlfhperpwlqdprlreecpktsgvnklawgrtagenqvwlgghhhdldphpldsaeavwhllatlgygpSgMctarvvrgrseRnvtagplrgtvsyhplgrtlfeslilnipypgtgaadlafweqpelndplglpeesaglagilrldhfrhavllhpspdgshvvdawvtwawrernispeldpyliyqtSkegRvYprpaeaeraiwrdldallhygedgnyrptildnctplaqvpqevldslrlrafgfdqdgQArdkqwftattpavlrwladretddnenarivrritlarkaaealgrrlekackeawkesnsgpwvqhgmsrywakaepvfwnivydrpaqgytpgmagpgnafnlvalaaydevtgpyceRpRvakvverhrstlfsnWtPk/YilqhadalvkrvsklivnepAarAalrRgvglapedprmlaahrvvapyvpvvhaverafyavaaimaaqprsardqeaearrpnlgvslaqavfdkglnadsteqRlhliarqnldgvhrhlprlvlYlrSdqvhidwgilirdlarwghtprhvarewvqdyhrtletltrqae/sdyilqhadalvkRvsklivnepAarAalrRgvmlaahrvvapyvpvhaverafyavaaimaaqprsardqrpnlgvslaqavfdkglnadsteqRlhliarqnldgvhrhlprlvlYlrsdqvhidwgilirdlarwghtprhvarewvqdyhrtletltrqae/sgfllrlagpmqswgehsmfgerdtlpypsrsgligmfaaaqgvrrgdpldrykelkftvrvdrpgvrlvdfhtiggglpkertvptaagerrdpkkativtsrsyladavftvavtgpeadtiadalaapywqpylgrrafvpdpllvlrrrvadpvrelveavplphrRveedaatvlvdliyetrtltvlndvplsfdsksrrystrqirvvptevpatlvagpgrdyqnklftyvkqcae >6c66_BCDEFHO:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRISPR RNA-GUIDED SURVEILLANCE COMPLEX, PRE-NICKING organism=THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) DNA sequence DT(L16) DC(L17) DC(L18) DA(L19) DG(L20) DG(L21) DC(L22) DG(L23) DA(L24) DC(L25) DA(L26) DG(L27) DC(L28) DC(L29) DC(L30) DA(L31) DC(L32) DA(L33) DT(L34) DG(L35) DG(L36) DC(L37) DA(L38) DT(L39) DT(L40) DC(L41) DC(L42) DA(L43) DC(L44) DT(L45) DT(L46) DA(L47) DT(L48) DC(L49) DA(L50) DC(L51) DT(L52) DG(L53) DG(L54) DC(L55) DT(L56) DT(L57) DC(L58) DG(L59) DT(L60) DC(L61) DC(L62) DG(L63) DC(L64) DG(L65) chainB (170) PHE204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) HIS216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) SER218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) HIS220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) MET221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) ASN222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (114) VAL115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) MET173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) ASP215 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) HIS216 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER218 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS220 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) MET221 0 0 0 0 0 0 0 0 14 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ASN222 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (114) VAL115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) MET221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ASN222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (172) MET173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) PHE204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) HIS216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) MET221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ASN222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (174) ALA175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) MET221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ASN222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (114) VAL115 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) MET173 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA175 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO (151) ALA165 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlfylpvpaidelaaiadehrdavakilpadritevlksrnvsvnlfgrmlaelpstevdgavqfahaftvhgttvevdfFtavddipkendHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf/tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttvevdfftavddipkenDHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf/tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrmlAelpstevdgavqfahaftvhgttvevdfftavddipkendhgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf/tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsvlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttvevdfFtavddipkendHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaa/tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsvlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrmlAelpstevdgavqfahaftvhgttvevdfftavddipkendhgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaa/tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttsagtfyryanvnldrlventgdaqtartavaeflraflstvpstlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaa/twltkivpdlryrqtradfrtagnlhrklirlssdlgeerianprqqsgllfrieetrnelyllvqshsplrvdrlgpgyhgvqmrnldpflarldkgsrvryrivasptkrlgrsenntqrlglkrgaaaeewwhsraaanglellstyAqtlddvrdpgtadrsrkirhpavrfdgeavisdvdavrhavlngigrgksygcgllslali >6c66_C: title=CRISPR RNA-GUIDED SURVEILLANCE COMPLEX, PRE-NICKING organism=? DNA sequence DT(L16) DC(L17) DC(L18) DA(L19) DG(L20) DG(L21) DC(L22) DG(L23) DA(L24) DC(L25) DA(L26) DG(L27) DC(L28) DC(L29) DC(L30) DA(L31) DC(L32) DA(L33) DT(L34) DG(L35) DG(L36) DC(L37) DA(L38) DT(L39) DT(L40) DC(L41) DC(L42) DA(L43) DC(L44) DT(L45) DT(L46) DA(L47) DT(L48) DC(L49) DA(L50) DC(L51) DT(L52) DG(L53) DG(L54) DC(L55) DT(L56) DT(L57) DC(L58) DG(L59) DT(L60) DC(L61) DC(L62) DG(L63) DC(L64) DG(L65) chainC (114) VAL115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) MET173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) ASP215 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) HIS216 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER218 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) HIS220 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) MET221 0 0 0 0 0 0 0 0 14 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ASN222 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttvevdfftavddipkenDHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf >6c6s_D:N-utilization_substance_G_protein_NusG,_N-terminal_domain;Translation_proteins_SH3-like_domain; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND WITH RFAH organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(B1):DC(A29) DG(B2):DC(A28) DG(B3):DC(A27) DT(B4):DA(A26) DA(B5):DT(A25) DT(B6):DA(A24) DT(B7):DA(A23) DC(B8):DG(A22) DG(B9):DC(A21) DC(B10):DG(A20) DC(B11):DG(A19) DG(B12):DC(A18) DT(B13):DA(A17) DG(B14):DG(A16) DT(B15):DT(A15) DA(B16):DG(A14) DC(B17):DC(A13) DC(B18):DG(A12) DT(B19):DA(A11) DC(B20):DT(A10) DT(B21):DG(A9) DC(B22):DG(A8) DG(B23):DC(A7) DC(B24):DG(A6) DA(B25):DT(A5) DG(B26):DC(A4) DC(B27):DG(A3) DC(B28):DG(A2) DC(B29):DG(A1) chainD ( 9) LYS10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 ( 15) ARG16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 19) HIS20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 ( 39) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 ( 69) ASN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 70) ALA71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 71) THR72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 72) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 prot.sequence qswyllycKrgqlqRaqeHlerQavnclapmitlekivRgkrtavseplfpnylfvefdpevihtttiNATRgvshfvrfgaspaivpsavihqlsvykpkdivdpatpypgdkviitegafegfqaiftepdgearsmlllnlinkeikhsvkntefrkl >6c6s_DIJ: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND WITH RFAH organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(B1):DC(A29) DG(B2):DC(A28) DG(B3):DC(A27) DT(B4):DA(A26) DA(B5):DT(A25) DT(B6):DA(A24) DT(B7):DA(A23) DC(B8):DG(A22) DG(B9):DC(A21) DC(B10):DG(A20) DC(B11):DG(A19) DG(B12):DC(A18) DT(B13):DA(A17) DG(B14):DG(A16) DT(B15):DT(A15) DA(B16):DG(A14) DC(B17):DC(A13) DC(B18):DG(A12) DT(B19):DA(A11) DC(B20):DT(A10) DT(B21):DG(A9) DC(B22):DG(A8) DG(B23):DC(A7) DC(B24):DG(A6) DA(B25):DT(A5) DG(B26):DC(A4) DC(B27):DG(A3) DC(B28):DG(A2) DC(B29):DG(A1) chainI ( 61) TYR62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 31) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 9) LYS10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 ( 15) ARG16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 19) HIS20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 ( 23) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 ( 39) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 ( 69) ASN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 70) ALA71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 71) THR72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 72) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 prot.sequence qswyllycKrgqlqRaqeHlerQavnclapmitlekivRgkrtavseplfpnylfvefdpevihtttiNATRgvshfvrfgaspaivpsavihqlsvykpkdivdpatpypgdkviitegafegfqaiftepdgearsmlllnlinkeikhsvkntefrkl/vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsYsgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyRRvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6c6t_DIJ: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND WITH RFAH organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(A1):DC(B29) DG(A2):DC(B28) DG(A3):DC(B27) DC(A4):DG(B26) DT(A5):DA(B25) DG(A6):DC(B24) DC(A7):DG(B23) DG(A8):DC(B22) DG(A9):DT(B21) DT(A10):DC(B20) DA(A11):DT(B19) DG(A12):DC(B18) DC(A13):DC(B17) DG(A14):DA(B16) DT(A15):DT(B15) DG(A16):DG(B14) DA(A17):DT(B13) DC(A18):DG(B12) DG(A19):DC(B11) DG(A20):DC(B10) DC(A21):DG(B9) DG(A22):DC(B8) DA(A23):DT(B7) DA(A24):DT(B6) DT(A25):DA(B5) DA(A26):DT(B4) DC(A27):DG(B3) DC(A28):DG(B2) DC(A29):DG(B1) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 19 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (240) LEU255 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 9) LYS10 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) GLN13 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG16 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) HIS20 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) GLN24 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ASN70 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ALA71 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) THR72 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG73 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) SER76 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qswyllycKrgQlqRaqeHleRQavnclapmitseplfpnylfvefdpevihtttiNATRgvShfvrfgaspaivpsavihqlsv/vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyRRvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6c6t_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND WITH RFAH organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(B1):DC(A29) DG(B2):DC(A28) DG(B3):DC(A27) DT(B4):DA(A26) DA(B5):DT(A25) DT(B6):DA(A24) DT(B7):DA(A23) DC(B8):DG(A22) DG(B9):DC(A21) DC(B10):DG(A20) DC(B11):DG(A19) DG(B12):DC(A18) DT(B13):DA(A17) DG(B14):DG(A16) DT(B15):DT(A15) DA(B16):DG(A14) DC(B17):DC(A13) DC(B18):DG(A12) DT(B19):DA(A11) DC(B20):DT(A10) DT(B21):DG(A9) DC(B22):DG(A8) DG(B23):DC(A7) DC(B24):DG(A6) DA(B25):DT(A5) DG(B26):DC(A4) DC(B27):DG(A3) DC(B28):DG(A2) DC(B29):DG(A1) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 19 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6c6u_IJN: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND WITH NUSG organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(A1):DC(B22) DG(A2):DT(B21) DG(A3):DC(B20) DC(A4):DT(B19) DT(A5):DC(B18) DG(A6):DC(B17) DG(A14):DA(B16) DT(A15):DT(B15) DG(A16):DG(B14) DA(A17):DT(B13) DC(A18):DG(B12) DG(A19):DC(B11) DG(A20):DC(B10) DC(A21):DG(B9) DG(A22):DC(B8) DA(A23):DT(B7) DA(A24):DT(B6) DT(A25):DA(B5) DA(A26):DT(B4) DC(A27):DG(B3) DC(A28):DG(B2) DC(A29):DG(B1) chainI (150) ARG151 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (256) ARG270 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG271 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG352 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRRvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/kkrwyvvqafsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq >6c6u_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND WITH NUSG organism=? DNA sequence DG(A1):DC(B22) DG(A2):DT(B21) DG(A3):DC(B20) DC(A4):DT(B19) DT(A5):DC(B18) DG(A6):DC(B17) DG(A14):DA(B16) DT(A15):DT(B15) DG(A16):DG(B14) DA(A17):DT(B13) DC(A18):DG(B12) DG(A19):DC(B11) DG(A20):DC(B10) DC(A21):DG(B9) DG(A22):DC(B8) DA(A23):DT(B7) DA(A24):DT(B6) DT(A25):DA(B5) DA(A26):DT(B4) DC(A27):DG(B3) DC(A28):DG(B2) DC(A29):DG(B1) chainJ (256) ARG270 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG271 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG352 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRRvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6ca0_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF E. COLI RNAP SIGMA70 OPEN COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(G3):DG(H60) DC(G4):DG(H59) DG(G5):DC(H58) DC(G6):DG(H57) DA(G7):DT(H56) DG(G8):DC(H55) DA(G9):DT(H54) DT(G10):DA(H53) DT(G11):DA(H52) DT(G12):DA(H51) DT(G13):DA(H50) DT(G14):DA(H49) DG(G15):DC(H48) DC(G16):DG(H47) DG(G17):DC(H46) DA(G18):DT(H45) DA(G19):DT(H44) DA(G20):DT(H43) DT(G21):DA(H42) DC(G22):DG(H41) DT(G23):DA(H40) DT(G24):DA(H39) DT(G25):DA(H38) DG(G26):DC(H37) DC(G27):DG(H36) DA(G28):DT(H35) DG(G29):DC(H34) DC(G30):DG(H33) DC(G31):DG(H32) DA(G32):DT(H31) DG(G33):DC(H30) DA(G34):DT(H29) DA(G35):DT(H28) DT(G36):DA(H27) chainF (293) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 (294) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (297) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 14 (315) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (318) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (434) GLU574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 4 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG586 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) GLN589 0 0 0 0 0 0 0 0 0 0 5 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eigrttdpvrmymremgtvelltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvddpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlrlvisiakkytnrglqfldliqegniglmkavdkfeyrrgykfstyatWWirQaitrsiadqartiripvHmiEtinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytlEevgkqfdvtrERiRQieakalrklrhpsrsevlrsfld >6cc8_A:DNA-binding_domain; title=CRYSTAL STRUCTURE MBD3 MBD DOMAIN IN COMPLEX WITH METHYLATED CPG DNA organism=HOMO SAPIENS DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DC(D3):DG(C10) DA(D4):DT(C9) DA(D5):DT(C8) 5CM(D6):DG(C7) DG(D7):5CM(C6) DT(D8):DA(C5) DT(D9):DA(C4) DG(D10):DC(C3) DG(D11):DC(C2) DC(D12):DG(C1) chainA ( 22) ARG22 0 0 0 0 0 13 17 0 0 0 0 0 ( 32) ASP32 0 0 0 0 0 0 3 0 0 0 0 0 ( 44) ARG44 0 0 0 0 0 23 13 3 0 0 0 0 prot.sequence merkrwecpalpqgwereevpRrsglsaghrdvfyyspsgkkfRskpqlarylggsmdlstfdfrtgkmlm >6cce_CFJ: title=CRYSTAL STRUCTURE OF A MYCOBACTERIUM SMEGMATIS RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH INHIBITOR KANGLEMYCIN A organism=? DNA sequence DG(O1):DC(O57) DC(O2):DG(O56) DT(O3):DA(O55) DT(O4):DA(O54) DG(O5):DC(O53) DA(O6):DT(O52) DC(O7):DG(O51) DA(O8):DT(O50) DA(O9):DT(O49) DA(O10):DT(O48) DA(O11):DT(O47) DG(O12):DC(O46) DT(O13):DA(O45) DG(O14):DC(O44) DT(O15):DA(O43) DT(O16):DA(O42) DA(O17):DT(O41) DA(O18):DT(O40) DA(O19):DT(O39) DT(O20):DA(O38) DT(O21):DA(O37) DG(O22):DC(O36) DT(O23):DA(O35) DG(O24):DC(O34) DC(O25):DG(O33) DT(O26):DA(O32) chainJ chainC chainF (125) TRP287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 (126) TRP288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 (129) GLN291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 (133) ARG295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 15 6 0 (146) VAL308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 (147) HIS309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 (150) GLU312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 (273) THR437 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (274) ARG438 0 0 0 0 0 6 15 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) GLU439 0 0 3 9 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) ARG440 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG442 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) GLN443 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewlvgsdrwrqaaidrgeenpvggleevlaelspiedfsgsmslsfsdprfdevkasvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstektlhsvkvipgrgawlefvridrkrrqpvtvllkaleqiverfgfseimmgtlekdttsgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkkltlteedvvatieylvrlhegqtsmtvpggvevpvevddidhfgnrrlrtvgeliqnqirvglsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreraglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvengvvtdqidyltadeedrhvvaqansptdengrftedrvmvrkkggevefvsadqvdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvadktgvieevsadyitvmaddgtrqsyrlrkfarsnhgtcanqrpivdagqrveagqviadgpctqngemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnvsdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsredddelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpflpdgtpvdiilnthgvprrmnigqilethlgwvakagwnidvaagvpdwasklpeelysapadstvatpvfdgaqegelagllgstlpnrdgevmvdadgkstlfdgrsgepfpypvtvgymyilklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaiemr/adsvraylkqigkvallnaeeevelakrieaglyatqklaelaekgeklpvqqrrdmqwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatWWirQaitRamadqartiripVHmvEvinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtiegdsqlgdfiedseavvavdavsftllqdqlqsvletlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyld/pprthwdmllerrsveeleellkerldlikakrrgt >6ccg_A:DNA-binding_domain; title=CRYSTAL STRUCTURE MBD3 MBD DOMAIN IN COMPLEX WITH METHYLATED CPG DNA organism=? DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DC(D3):DG(C10) DA(D4):DT(C9) DG(D5):DC(C8) 5CM(D6):DG(C7) DG(D7):5CM(C6) DC(D8):DG(C5) DT(D9):DA(C4) DG(D10):DC(C3) DG(D11):DC(C2) DC(D12):DG(C1) chainA ( 23) ARG22 0 0 0 0 0 12 14 0 0 0 0 0 ( 33) ASP32 0 0 0 0 0 0 3 0 0 0 0 0 ( 45) ARG44 0 0 0 0 0 22 13 2 0 0 0 0 prot.sequence smerkrwecpalpqgwereevpRrsglsaghrdvfyyspsgkkfRskpqlarylggsmdlstfdfrtgkmlm >6ccv_FT:C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=CRYSTAL STRUCTURE OF A MYCOBACTERIUM SMEGMATIS RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH INHIBITOR RIFAMPICIN organism=? DNA sequence DG(O1):DC(P26) DC(O2):DG(P25) DT(O3):DA(P24) DT(O4):DA(P23) DG(O5):DC(P22) DA(O6):DT(P21) DC(O7):DG(P20) DA(O8):DT(P19) DA(O9):DT(P18) DA(O10):DT(P17) DA(O11):DT(P16) DG(O12):DC(P15) DT(O13):DA(P14) DG(O14):DC(P13) DT(O15):DA(P12) DT(O16):DA(P11) DA(O17):DT(P10) DA(O18):DT(P9) DA(O19):DT(P8) DT(O20):DA(P7) DT(O21):DA(P6) DG(O22):DC(P5) DT(O23):DA(P4) DG(O24):DC(P3) DC(O25):DG(P2) DT(O26):DA(P1) chainF (126) TRP287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 (127) TRP288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 (130) GLN291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 (133) THR294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (134) ARG295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 12 4 0 (147) VAL308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 (148) HIS309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 (151) GLU312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 (276) THR437 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) ARG438 0 0 0 0 0 5 18 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) GLU439 0 0 1 4 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) ARG440 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ARG442 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) GLN443 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT ( 9) ARG259 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sadsvraylkqigkvallnaeeevelakrieaglyatqklaelaekgeklpvqqrrdmqwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatWWirQaiTRamadqartiripVHmvEvinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvletlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyld/iddldltvRsynclkregvhtvgelvartesdlldirnfgqksidevkiklhq >6ceu_B:DNA-binding_domain; title=MBD3 MBD IN COMPLEX WITH METHYLATED, NON-PALINDROMIC CPG DNA: ALTERNATIVE INTERPRETATION OF CRYSTALLOGRAPHIC DATA organism=Homo sapiens DNA sequence DG(F1):DC(E12) DC(F2):DG(E11) DC(F3):DG(E10) DA(F4):DT(E9) DA(F5):DT(E8) 5CM(F6):DG(E7) DG(F7):5CM(E6) DC(F8):DG(E5) DT(F9):DA(E4) DG(F10):DC(E3) DG(F11):DC(E2) DC(F12):DG(E1) chainB ( 22) ARG22 0 0 0 0 0 13 17 0 0 0 0 0 ( 32) ASP32 0 0 0 0 0 0 3 0 0 0 0 0 ( 44) ARG44 0 0 0 0 0 21 12 3 0 0 0 0 prot.sequence merkrwecpalpqgwereevpRrsglsaghrdvfyyspsgkkfRskpqlarylggsmdlstfdfrtgkml >6cfi_A:Cysteine_proteinases; title=CRYSTAL STRUCTURE OF RAD4-RAD23 BOUND TO A 6-4 PHOTOPRODUCT UV LESION organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DT(Y2):DA(W24) DT(Y3):DA(W23) DG(Y4):DC(W22) DT(Y5):DA(W21) DA(Y6):DT(W20) DG(Y7):DC(W19) DC(Y8):DG(W18) DT(Y10):DA(W15) DG(Y11):DC(W14) DG(Y12):DC(W13) DA(Y13):DT(W12) DT(Y14):DA(W11) DG(Y15):DC(W10) DT(Y16):DA(W9) DT(Y17):DA(W8) DG(Y18):DC(W7) DA(Y19):DT(W6) DG(Y20):DC(W5) DT(Y21):DA(W4) DC(Y22):DG(W3) DA(Y23):DT(W2) chainA (344) HIS472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 (463) PHE599 0 0 0 0 0 0 0 57 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) THR604 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rnvcsneerkrrkyfhmlylvclmvhgfirnewinskrlsrklsnlvpekvfellhpqkdeelplrstrklldglkkcmelwqkhwkitkkydneglymrtwkeiemsannkrkfktlkrsdflravskghgdpdisvqgfvamlracnvnarlimscqppdftnmkidtslngnnaykdmvkypifwcevwdkfskkwitvdpvnlktieqvrlhsklapkgvaccernmlryviaydrkygcrdvtrryaqwmnskvrkrritkddfgekwfrkvitalhhrkrtkiddyedqyffrrdesegipdsvqdlknhpyyvleqdikqtqivkpgckecgylkvHgkvgkvlkvyakrdiadlksarqwymngrilktgsrckkvikrtveederlysfedtelyipplasasgeitkntfgnievfaptmipgncclvenpvaikaarflgvefapavtsfkFergsTvkpvlsgivvakwlreaietaidgiefi >6cg0_A: title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 HFC COMPLEX (3.17 A) organism=MUS MUSCULUS DNA sequence DA(L18):DT(F29) DC(L19):DG(F28) DA(L20):DT(F27) DG(L21):DC(F26) DT(L22):DA(F25) DG(L23):DC(F24) DA(L24):DT(F23) DT(L25):DA(F22) DA(L26):DT(F21) DC(L27):DG(F20) DA(L28):DT(F19) DG(L29):DC(F18) DC(L30):DG(F17) DC(L31):DG(F16) DC(L32):DG(F15) DT(L33):DA(F14) DT(L34):DA(F13) DA(L35):DT(F12) DA(L36):DT(F11) DC(L37):DG(F10) DA(L38):DT(F9) DA(L40):DT(F7) DA(L41):DT(F6) DA(L42):DT(F5) DC(L43):DG(F4) DC(L44):DG(F3) DC(L45):DG(F2) DG(L46):DC(F1) chainA ( 49) ASN443 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) ASN850 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (458) ASN852 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (461) ARG855 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (565) GLU959 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (569) SER963 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (572) LYS966 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmNgNfaRklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasEgnqSgnKlfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna >6cg8_E: title=STRUCTURE OF C. CRESCENTUS GAPR-DNA organism=Caulobacter vibrioides DNA sequence DT(F7):DA(C13) DT(F8):DA(C12) DT(F9):DA(C11) DA(F10):DT(C10) DA(F11):DT(C9) DT(F12):DA(C8) DT(F13):DA(C7) DT(F15):DA(C5) DA(F16):DT(C4) DA(F17):DT(C3) chainE ( 31) LYS42 0 0 1 0 0 0 0 0 0 0 prot.sequence mnstaqgqlksiierverlevekaeimeqiKevyaeakgngfdvkvlkkvvrirkqdrakrqeedaildlymsaigei >6chv_AC:lambda_repressor-like_DNA-binding_domains; title=PROTEUS VULGARIS HIGA ANTITOXIN BOUND TO DNA organism=Proteus vulgaris DNA sequence DG(J1):DC(I21) DT(J2):DA(I20) DA(J3):DT(I19) DT(J4):DA(I18) DT(J5):DA(I17) DA(J6):DT(I16) DC(J7):DG(I15) DA(J8):DT(I14) DT(J9):DA(I13) DG(J10):DC(I12) DG(J11):DC(I11) DT(J12):DA(I10) DG(J13):DC(I9) DT(J14):DA(I8) DG(J15):DC(I7) DT(J16):DA(I6) DA(J17):DT(I5) DA(J18):DT(I4) DT(J19):DA(I3) DA(J20):DT(I2) DC(J21):DG(I1) chainA ( 22) ARG25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 31) THR34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 33) ALA36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 4 0 0 0 0 ( 36) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 ( 37) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 16 10 1 2 0 0 0 0 ( 43) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainC ( 22) ARG25 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) THR34 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) PRO35 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA36 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER39 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG40 0 0 0 0 2 2 11 16 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR46 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fkvshpgemiardledmgvsgRrfahnigvTpAtvSRllagkTaltpslsiriaaalgstpefwlrlqsnydlrqlenqidtsgivlyg/fkvshpgemiardledmgvsgRrfahnigvTPAtvSRllagkTaltpslsiriaaalgstpefwlrlqsnydlrqlenqidtsgivly >6chv_BD:lambda_repressor-like_DNA-binding_domains; title=PROTEUS VULGARIS HIGA ANTITOXIN BOUND TO DNA organism=Proteus vulgaris DNA sequence DG(E1):DC(F21) DT(E2):DA(F20) DA(E3):DT(F19) DT(E4):DA(F18) DT(E5):DA(F17) DA(E6):DT(F16) DC(E7):DG(F15) DA(E8):DT(F14) DC(E9):DG(F13) DA(E10):DT(F12) DC(E11):DG(F11) DC(E12):DG(F10) DA(E13):DT(F9) DT(E14):DA(F8) DG(E15):DC(F7) DT(E16):DA(F6) DA(E17):DT(F5) DA(E18):DT(F4) DT(E19):DA(F3) DA(E20):DT(F2) DC(E21):DG(F1) chainB ( 21) ARG25 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) THR34 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ALA36 0 0 0 0 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER39 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG40 0 0 0 0 1 1 13 18 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR46 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 21) ARG25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 ( 30) THR34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 ( 32) ALA36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 ( 35) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 ( 36) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 18 12 1 1 0 0 0 0 ( 42) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence kvshpgemiardledmgvsgRrfahnigvTpAtvSRllagkTaltpslsiriaaalgstpefwlrlqsnydlrqlenqidtsgivlyg/kvshpgemiardledmgvsgRrfahnigvTpAtvSRllagkTaltpslsiriaaalgstpefwlrlqsnydlrqlenqidtsgivlygesn >6chv_D:lambda_repressor-like_DNA-binding_domains; title=PROTEUS VULGARIS HIGA ANTITOXIN BOUND TO DNA organism=Proteus vulgaris DNA sequence DG(F1):DC(E21) DT(F2):DA(E20) DA(F3):DT(E19) DT(F4):DA(E18) DT(F5):DA(E17) DA(F6):DT(E16) DC(F7):DG(E15) DA(F8):DT(E14) DT(F9):DA(E13) DG(F10):DC(E12) DG(F11):DC(E11) DT(F12):DA(E10) DG(F13):DC(E9) DT(F14):DA(E8) DG(F15):DC(E7) DT(F16):DA(E6) DA(F17):DT(E5) DA(F18):DT(E4) DT(F19):DA(E3) DA(F20):DT(E2) DC(F21):DG(E1) chainD ( 21) ARG25 0 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) THR34 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ALA36 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER39 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG40 0 0 0 0 1 1 12 18 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR46 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvshpgemiardledmgvsgRrfahnigvTpAtvSRllagkTaltpslsiriaaalgstpefwlrlqsnydlrqlenqidtsgivlygesn >6chv_GH:lambda_repressor-like_DNA-binding_domains; title=PROTEUS VULGARIS HIGA ANTITOXIN BOUND TO DNA organism=Proteus vulgaris DNA sequence DG(K1):DC(L21) DT(K2):DA(L20) DA(K3):DT(L19) DT(K4):DA(L18) DT(K5):DA(L17) DA(K6):DT(L16) DC(K7):DG(L15) DA(K8):DT(L14) DC(K9):DG(L13) DA(K10):DT(L12) DC(K11):DG(L11) DC(K12):DG(L10) DA(K13):DT(L9) DT(K14):DA(L8) DG(K15):DC(L7) DT(K16):DA(L6) DA(K17):DT(L5) DA(K18):DT(L4) DT(K19):DA(L3) DA(K20):DT(L2) DC(K21):DG(L1) chainG ( 20) ARG25 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) THR34 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ALA36 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER39 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) ARG40 0 0 0 0 1 1 14 16 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR46 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 19) ARG25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 28) THR34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 ( 30) ALA36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 4 0 0 0 0 ( 33) SER39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 ( 34) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 19 14 2 1 0 0 0 0 ( 40) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence vshpgemiardledmgvsgRrfahnigvTpAtvSRllagkTaltpslsiriaaalgstpefwlrlqsnydlrqlenqidtsgivlygesne/shpgemiardledmgvsgRrfahnigvTpAtvSRllagkTaltpslsiriaaalgstpefwlrlqsnydlrqlenqidtsgivlyg >6cil_DN:Galactose_oxidase,_central_domain; title=PRE-REACTION COMPLEX, RAG1(E962Q)/2-INTACT/INTACT 12/23RSS COMPLEX IN MN2+ organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DG(G3):DC(J55) DG(G4):DC(J54) DT(G5):DA(J53) DT(G6):DA(J52) DT(G7):DA(J51) DT(G8):DA(J50) DT(G9):DA(J49) DG(G10):DC(J48) DT(G11):DA(J47) DC(G12):DG(J46) DT(G13):DA(J45) DG(G14):DC(J44) DG(G15):DC(J43) DC(G16):DG(J42) DT(G17):DA(J41) DT(G18):DA(J40) DC(G19):DG(J39) DA(G20):DT(J38) DC(G21):DG(J37) DA(G22):DT(J36) DC(G23):DG(J35) DT(G25):DA(J33) DG(G26):DC(J32) DA(G27):DT(J31) DT(G28):DA(J30) DT(G29):DA(J29) DT(G30):DA(J28) DG(G31):DC(J27) DC(G32):DG(J26) DA(G33):DT(J25) DT(G34):DA(J24) DC(G35):DG(J23) DA(G36):DT(J22) DC(G37):DG(J21) DT(G38):DA(J20) DG(G39):DC(J19) DT(G40):DA(J18) DG(G41):DC(J17) DT(G42):DA(J16) DA(G44):DT(J14) DG(G45):DC(J13) DC(G47):DG(J11) DG(G49):DC(J9) DG(G50):DC(J8) DC(G51):DG(J7) DC(G52):DG(J6) DA(G53):DT(J5) DG(G54):DC(J4) DA(G55):DT(J3) chainD chainN ( 2) SER100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) PHE102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykkhqyiihggktpnnelsdkiyimsvacknnvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslieisemetpdwtsdikhskiwfgsnmgngtiflgipgeafyfytlr/pSaFflfcseyrpkikgehpggdvakklgemwnntdkqpyekkaaklkekyekdi >6cim_DN:Galactose_oxidase,_central_domain; title=PRE-REACTION COMPLEX, RAG1(E962Q)/2-NICKED/INTACT 12/23RSS COMPLEX IN MN2+ organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DC(J4):DG(G54) DT(J5):DA(G53) DG(J6):DC(G52) DG(J7):DC(G51) DC(J8):DG(G50) DC(J9):DG(G49) DT(J10):DA(G48) DG(J11):DC(G47) DT(J12):DA(G46) DC(J13):DG(G45) DT(J14):DA(G44) DT(J15):DA(G43) DA(J16):DT(G42) DC(J17):DG(G41) DA(J18):DT(G40) DC(J19):DG(G39) DA(J20):DT(G38) DG(J21):DC(G37) DT(J22):DA(G36) DG(J23):DC(G35) DA(J24):DT(G34) DT(J25):DA(G33) DG(J26):DC(G32) DC(J27):DG(G31) DA(J28):DT(G30) DA(J29):DT(G29) DA(J30):DT(G28) DT(J31):DA(G27) DC(J32):DG(G26) DA(J33):DT(G25) DA(J34):DT(G24) DG(J35):DC(G23) DT(J36):DA(G22) DG(J37):DC(G21) DT(J38):DA(G20) DG(J39):DC(G19) DA(J40):DT(G18) DA(J41):DT(G17) DG(J42):DC(G16) DC(J43):DG(G15) DC(J44):DG(G14) DA(J45):DT(G13) DG(J46):DC(G12) DA(J47):DT(G11) DC(J48):DG(G10) DA(J49):DT(G9) DA(J50):DT(G8) DA(J52):DT(G6) DA(J53):DT(G5) DC(J54):DG(G4) DC(J55):DG(G3) chainD chainN ( 20) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 24) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 36) PHE102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PHE103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ILE122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ALA126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkeafyfytlrcs/fvqtcreehkkkhpdasvnFsefSkkcserrppsaFFlfcseyrpkikgehpglsIgdvAkklgemwnntdkqpyekkaaklkekyekdi >6cly_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 8-CLG AS THE TEMPLATE BASE IN A 1-NUCLEOTIDE GAPPED DNA organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 38 0 0 0 0 ( 29) LYS35 8 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6cnb_ABEPRS:"Winged_helix"_DNA-binding_domain;NTF2-like;TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon;Homeodomain-like; title=YEAST RNA POLYMERASE III INITIAL TRANSCRIBING COMPLEX organism=? DNA sequence DG(Y11):DT(X69) DG(Y12):DG(X68) DA(Y13):DA(X67) DG(Y14):DA(X66) DT(Y15):DC(X65) DC(Y16):DC(X64) DA(Y17):DG(X63) DT(Y18):DG(X62) DT(Y19):DT(X61) DT(Y20):DA(X60) DT(Y21):DC(X59) DA(Y22):DC(X58) DT(Y23):DT(X57) DC(Y24):DC(X56) DT(Y25):DA(X55) DT(Y26):DG(X54) DG(Y27):DT(X53) DT(Y28):DA(X52) DG(Y29):DA(X51) DA(Y38):DA(X50) DC(Y39):DG(X31) DA(Y40):DT(X30) DG(Y41):DC(X29) DA(Y42):DT(X28) DA(Y43):DT(X27) DA(Y44):DT(X26) DA(Y45):DT(X25) DA(Y46):DT(X24) DG(Y47):DC(X23) DT(Y48):DA(X22) DA(Y49):DT(X21) DT(Y50):DA(X20) DT(Y51):DA(X19) DA(Y52):DT(X18) DC(Y53):DG(X17) DT(Y54):DA(X16) DA(Y55):DT(X15) DA(Y56):DT(X14) DT(Y57):DA(X13) DA(Y58):DT(X12) DT(Y59):DA(X11) DA(Y60):DT(X10) DT(Y61):DA(X9) DG(Y62):DC(X8) DT(Y63):DA(X7) DT(Y64):DA(X6) DG(Y65):DC(X5) DA(Y66):DT(X4) DA(Y67):DT(X3) DA(Y68):DT(X2) DA(Y69):DT(X1) chainA (339) SER340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) LYS360 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) ARG378 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) PRO478 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (515) GLU516 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (878) THR879 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (879) ALA880 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1341) ARG1373 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (446) ARG481 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) LYS482 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1017) GLU1052 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1021) ARG1056 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainP chainR ( 43) LEU73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) GLU253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (276) ASN395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) VAL397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) PHE425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) LEU440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) PHE442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) THR450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) GLN484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) ASN485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) VAL487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) PHE516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 (398) PRO517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (412) LEU531 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (414) PHE533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (420) VAL539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (422) THR541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainS (100) TYR416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 prot.sequence kevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqrrclhcgalngvvkkaaagagsaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpamlpgSsngggkvkpirgfcqrlkgKqgrfrgnlsgkrvdfsgRtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqPslhrlsilshyakirpwrtfrlnecvctpynadfdgdEmnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavkTAetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpsendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalkan/deintaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeksRKvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsadapnpnnvnvqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptEgrsRdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm/qlsdnaktlhsqmmskgigalftqqelqkqmgigsltdlmsivqelldknliklvkqndelkfqgvleseaqkkatmsaeealvysyieasgregiwsktikartnlhqhvvlkclkslesqryvksvksvkfptrkiymlyslqpsvdeldiefinslltivwrfisentfpngfknfengpkknvfyapnvknysttqeilefitaaqvanveltpsnirslcevlvyddklekvthdcyrvtlesilqmsifnyfkmfpaskhdkevvyfdewt/mpvcknchgteferdlsnanndlvckacgvvsednpivsevaLeSreatlnnarrklravsyalhipeyitdaafqwyklalannfvqgrrsqnviasclyvacrkekthhmlidfssrlqvsvysigatflkmvkklhitelpladpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeEtlqqrlnefkntkaaklsvqkfrendvedgearppsfvknrkkesgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmvvTgakseddsklasrkyariiqkigfaakftdfkiQNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkmsgsprnlhllpttdtylskvsddpdnledvddeelnahllneeasklkeriwiglnadflleqeskrlkqeadia/xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtaiqlklnpdgtmaideetmvvdrhknasieneykekvdenpfanlynygsygrgsYtdpwtveemikfykalsmwgtdfnlisqlypyrsrkqvkakfvneekkrpilielalrsklppnfdeycceikknigtvadfneklielqnehkhhmkeieeakntakeedqtaqrl >6cnb_R:TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon; title=YEAST RNA POLYMERASE III INITIAL TRANSCRIBING COMPLEX organism=? DNA sequence DT(X1):DA(Y69) DT(X2):DA(Y68) DT(X3):DA(Y67) DT(X4):DA(Y66) DC(X5):DG(Y65) DA(X6):DT(Y64) DA(X7):DT(Y63) DC(X8):DG(Y62) DA(X9):DT(Y61) DT(X10):DA(Y60) DA(X11):DT(Y59) DT(X12):DA(Y58) DA(X13):DT(Y57) DT(X14):DA(Y56) DT(X15):DA(Y55) DA(X16):DT(Y54) DG(X17):DC(Y53) DT(X18):DA(Y52) DA(X19):DT(Y51) DA(X20):DT(Y50) DT(X21):DA(Y49) DA(X22):DT(Y48) DC(X23):DG(Y47) DT(X24):DA(Y46) DT(X25):DA(Y45) DT(X26):DA(Y44) DT(X27):DA(Y43) DT(X28):DA(Y42) DC(X29):DG(Y41) DT(X30):DA(Y40) DG(X31):DC(Y39) DA(X50):DT(Y20) DA(X51):DT(Y19) DA(X52):DT(Y18) DT(X53):DA(Y17) DG(X54):DC(Y16) DA(X55):DT(Y15) DC(X56):DG(Y14) DT(X57):DA(Y13) DC(X58):DG(Y12) DC(X59):DG(Y11) DA(X60):DT(Y10) DT(X61):DA(Y9) DG(X62):DC(Y8) DG(X63):DC(Y7) DC(X64):DG(Y6) DC(X65):DG(Y5) DA(X66):DT(Y4) DA(X67):DT(Y3) DG(X68):DC(Y2) DT(X69):DA(Y1) chainR ( 45) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) GLU253 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) ASN395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) VAL397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) PHE425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) LEU440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) PHE442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) THR450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) GLN484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) ASN485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) VAL487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) PHE516 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (398) PRO517 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) LEU531 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) PHE533 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) VAL539 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (422) THR541 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mpvcknchgteferdlsnanndlvckacgvvsednpivsevaleSreatlnnarrklravsyalhipeyitdaafqwyklalannfvqgrrsqnviasclyvacrkekthhmlidfssrlqvsvysigatflkmvkklhitelpladpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeEtlqqrlnefkntkaaklsvqkfrendvedgearppsfvknrkkesgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmvvTgakseddsklasrkyariiqkigfaakftdfkiQNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkmsgsprnlhllpttdtylskvsddpdnledvddeelnahllneeasklkeriwiglnadflleqeskrlkqeadia >6cnb_S:Homeodomain-like; title=YEAST RNA POLYMERASE III INITIAL TRANSCRIBING COMPLEX organism=? DNA sequence DT(X1):DA(Y69) DT(X2):DA(Y68) DT(X3):DA(Y67) DT(X4):DA(Y66) DC(X5):DG(Y65) DA(X6):DT(Y64) DA(X7):DT(Y63) DC(X8):DG(Y62) DA(X9):DT(Y61) DT(X10):DA(Y60) DA(X11):DT(Y59) DT(X12):DA(Y58) DA(X13):DT(Y57) DT(X14):DA(Y56) DT(X15):DA(Y55) DA(X16):DT(Y54) DG(X17):DC(Y53) DT(X18):DA(Y52) DA(X19):DT(Y51) DA(X20):DT(Y50) DT(X21):DA(Y49) DA(X22):DT(Y48) DC(X23):DG(Y47) DT(X24):DA(Y46) DT(X25):DA(Y45) DT(X26):DA(Y44) DT(X27):DA(Y43) DT(X28):DA(Y42) DC(X29):DG(Y41) DT(X30):DA(Y40) DG(X31):DC(Y39) DA(X50):DT(Y20) DA(X51):DT(Y19) DA(X52):DT(Y18) DT(X53):DA(Y17) DG(X54):DC(Y16) DA(X55):DT(Y15) DC(X56):DG(Y14) DT(X57):DA(Y13) DC(X58):DG(Y12) DC(X59):DG(Y11) DA(X60):DT(Y10) DT(X61):DA(Y9) DG(X62):DC(Y8) DG(X63):DC(Y7) DC(X64):DG(Y6) DC(X65):DG(Y5) DA(X66):DT(Y4) DA(X67):DT(Y3) DG(X68):DC(Y2) DT(X69):DA(Y1) chainS (100) TYR416 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtaiqlklnpdgtmaideetmvvdrhknasieneykekvdenpfanlynygsygrgsYtdpwtveemikfykalsmwgtdfnlisqlypyrsrkqvkakfvneekkrpilielalrsklppnfdeycceikknigtvadfneklielqnehkhhmkeieeakntakeedqtaqrl >6cnc_ABEOPRS:"Winged_helix"_DNA-binding_domain;NTF2-like;TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon;Homeodomain-like; title=YEAST RNA POLYMERASE III OPEN COMPLEX organism=? DNA sequence DA(Y11):DG(X63) DT(Y12):DG(X62) DT(Y13):DT(X61) DT(Y14):DA(X60) DT(Y15):DC(X59) DA(Y16):DC(X58) DT(Y17):DT(X57) DC(Y18):DC(X56) DT(Y19):DA(X55) DT(Y20):DG(X54) DG(Y21):DT(X53) DT(Y22):DA(X52) DG(Y23):DA(X51) DT(Y24):DA(X50) DC(Y25):DA(X49) DA(Y26):DT(X48) DC(Y27):DA(X47) DT(Y28):DG(X46) DT(Y29):DA(X45) DA(Y32):DA(X44) DC(Y33):DG(X31) DA(Y34):DT(X30) DG(Y35):DC(X29) DA(Y36):DT(X28) DA(Y37):DT(X27) DA(Y38):DT(X26) DA(Y39):DT(X25) DA(Y40):DT(X24) DG(Y41):DC(X23) DT(Y42):DA(X22) DA(Y43):DT(X21) DT(Y44):DA(X20) DT(Y45):DA(X19) DA(Y46):DT(X18) DC(Y47):DG(X17) DT(Y48):DA(X16) DA(Y49):DT(X15) DA(Y50):DT(X14) DT(Y51):DA(X13) DA(Y52):DT(X12) DT(Y53):DA(X11) DA(Y54):DT(X10) DT(Y55):DA(X9) DG(Y56):DC(X8) DT(Y57):DA(X7) DT(Y58):DA(X6) DG(Y59):DC(X5) DA(Y60):DT(X4) DA(Y61):DT(X3) DA(Y62):DT(X2) DA(Y63):DT(X1) chainA (314) HIS315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) PRO478 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (878) THR879 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (879) ALA880 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1341) ARG1373 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (445) SER480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG481 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1021) ARG1056 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainO chainP chainR ( 43) LEU73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) GLU253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 8 0 0 0 0 0 0 (224) THR254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (227) GLN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (276) ASN395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) VAL397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) PHE425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) LEU440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) PHE442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) VAL448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) THR450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) GLN484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) ASN485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) VAL487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) PHE516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 (398) PRO517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (412) LEU531 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (414) PHE533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (420) VAL539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (422) THR541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainS (100) TYR416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 prot.sequence kevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqrrclhcgalngvvkkaaagagsaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmeHwdylqltvamyinsdsvnpamlpgssngggkvkpirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqPslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavkTAetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpsendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalkan/deintaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfekSRkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsadapnpnnvnvqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsRdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm/vmtissleqrtlnpdlflykelvkahlgeraasvigmlvalgrlsvrelvekidgmdvdsvkttlvsltqlrcvkylqetaisgkkttyyyyneegihillysgliideiitqmrvndeeehkqlvaeivqnvislgsltvedylssvtsdsmkytisslfvqlcemgyliqisklhytpiedlwqflyekhykniprnsplsdlkkrsqakmnaktdfakiinkpnelsqiltvdpktslrivkptvsltinldrfmkgrrskqlinlaktrvgsvtaqvykialrlteqkspkirdpltqtgllqdleeaksfqdeaelveektpgltfnaidlarhlpsaslinshlkilassnfpflnetkpgvyyvpysklmpvlkssvyeyviastlgpsamrlsrcirdnklvsekiinstalmkekdirstlaslirynsveiqevPRtadrsasravflfrckethsynfmrqnlewnmanllfkkeklkqenstllkkanrddllpselnqlkmvnerelnvfarlsrllslwevfqma/qlsdnaktlhsqmmskgigalftqqelqkqmgigsltdlmsivqelldknliklvkqndelkfqgvleseaqkkatmsaeealvysyieasgregiwsktikartnlhqhvvlkclkslesqryvksvksvkfptrkiymlyslqpsvdeldiefinslltivwrfisentfpngfknfengpkknvfyapnvknysttqeilefitaaqvanveltpsnirslcevlvyddklekvthdcyrvtlesilqmsifnyfkmfpaskhdkevvyfdewt/mpvcknchgteferdlsnanndlvckacgvvsednpivsevaLeSreatlnnarrklravsyalhipeyitdaafqwyklalannfvqgrrsqnviasclyvacrkekthhmlidfssrlqvsvysigatflkmvkklhitelpladpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeETlqQrlnefkntkaaklsvqkfrendvedgearppsfvknrkkesgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiQNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkmsgsprnlhllpttdtylskvsddpdnledvddeelnahllneeasklkeriwiglnadflleqeskrlkqeadia/xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtaiqlklnpdgtmaideetmvvdrhknasieneykekvdenpfanlynygsygrgsYtdpwtveemikfykalsmwgtdfnlisqlypyrsrkqvkakfvneekkrpilielalrsklppnfdeycceikknigtvadfneklielqnehkhhmkeieeakntakeedqtaqrl >6cnd_ABEPRS:"Winged_helix"_DNA-binding_domain;NTF2-like;TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon;Homeodomain-like; title=YEAST RNA POLYMERASE III NATURAL OPEN COMPLEX (NOC) organism=? DNA sequence DA(Y11):DG(X63) DT(Y12):DG(X62) DT(Y13):DT(X61) DT(Y14):DA(X60) DT(Y15):DC(X59) DA(Y16):DC(X58) DT(Y17):DT(X57) DC(Y18):DC(X56) DT(Y19):DA(X55) DT(Y20):DG(X54) DG(Y21):DT(X53) DT(Y22):DA(X52) DG(Y23):DA(X51) DT(Y24):DA(X50) DC(Y25):DA(X49) DA(Y26):DT(X48) DC(Y27):DA(X47) DT(Y28):DG(X46) DT(Y29):DA(X45) DA(Y32):DA(X44) DC(Y33):DG(X31) DA(Y34):DT(X30) DG(Y35):DC(X29) DA(Y36):DT(X28) DA(Y37):DT(X27) DA(Y38):DT(X26) DA(Y39):DT(X25) DA(Y40):DT(X24) DG(Y41):DC(X23) DT(Y42):DA(X22) DA(Y43):DT(X21) DT(Y44):DA(X20) DT(Y45):DA(X19) DA(Y46):DT(X18) DC(Y47):DG(X17) DT(Y48):DA(X16) DA(Y49):DT(X15) DA(Y50):DT(X14) DT(Y51):DA(X13) DA(Y52):DT(X12) DT(Y53):DA(X11) DA(Y54):DT(X10) DT(Y55):DA(X9) DG(Y56):DC(X8) DT(Y57):DA(X7) DT(Y58):DA(X6) DG(Y59):DC(X5) DA(Y60):DT(X4) DA(Y61):DT(X3) DA(Y62):DT(X2) DA(Y63):DT(X1) chainA (341) ASN342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (879) ALA880 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1341) ARG1373 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (445) SER480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG481 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1021) ARG1056 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainP chainR ( 41) VAL41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LEU73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) GLU253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 1 0 0 0 0 0 (276) ASN395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) VAL397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) PHE425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) LEU440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) PHE442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) VAL448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) GLN484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) ASN485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) VAL487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) PHE516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 2 0 0 0 0 0 0 0 0 0 0 0 (398) PRO517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (412) LEU531 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (414) PHE533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (420) VAL539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 (422) THR541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainS prot.sequence kevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqrrclhcgalngvvkkaaagagsaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpamlpgssNgggkvkpirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavktAetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpsendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalkan/deintaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfekSRkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsadapnpnnvnvqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsRdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm/qlsdnaktlhsqmmskgigalftqqelqkqmgigsltdlmsivqelldknliklvkqndelkfqgvleseaqkkatmsaeealvysyieasgregiwsktikartnlhqhvvlkclkslesqryvksvksvkfptrkiymlyslqpsvdeldiefinslltivwrfisentfpngfknfengpkknvfyapnvknysttqeilefitaaqvanveltpsnirslcevlvyddklekvthdcyrvtlesilqmsifnyfkmfpaskhdkevvyfdewt/mpvcknchgteferdlsnanndlvckacgvvsednpivseVaLeSreatlnnarrklravsyalhipeyitdaafqwyklalannfvqgrrsqnviasclyvacrkekthhmlidfssrlqvsvysigatflkmvkklhitelpladpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeEtlqqrlnefkntkaaklsvqkfrendvedgearppsfvknrkkesgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvtgakseddsklasrkyariiqkigfaakftdfkiQNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkmsgsprnlhllpttdtylskvsddpdnledvddeelnahllneeasklkeriwiglnadflleqeskrlkqeadia/xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxXxXtAiqlklnpdgtmaideetmvvdrhknasieneykekvdenpfanlynygsygrgsytdpwtveemikfykalsmwgtdfnlisqlypyrsrkqvkakfvneekkrpilielalrsklppnfdeycceikknigtvadfneklielqnehkhhmkeieeakntakeedqtaqrl >6cnd_R:TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon; title=YEAST RNA POLYMERASE III NATURAL OPEN COMPLEX (NOC) organism=? DNA sequence DT(X1):DA(Y63) DT(X2):DA(Y62) DT(X3):DA(Y61) DT(X4):DA(Y60) DC(X5):DG(Y59) DA(X6):DT(Y58) DA(X7):DT(Y57) DC(X8):DG(Y56) DA(X9):DT(Y55) DT(X10):DA(Y54) DA(X11):DT(Y53) DT(X12):DA(Y52) DA(X13):DT(Y51) DT(X14):DA(Y50) DT(X15):DA(Y49) DA(X16):DT(Y48) DG(X17):DC(Y47) DT(X18):DA(Y46) DA(X19):DT(Y45) DA(X20):DT(Y44) DT(X21):DA(Y43) DA(X22):DT(Y42) DC(X23):DG(Y41) DT(X24):DA(Y40) DT(X25):DA(Y39) DT(X26):DA(Y38) DT(X27):DA(Y37) DT(X28):DA(Y36) DC(X29):DG(Y35) DT(X30):DA(Y34) DG(X31):DC(Y33) DA(X44):DA(Y32) DA(X45):DT(Y29) DG(X46):DT(Y28) DA(X47):DC(Y27) DT(X48):DA(Y26) DA(X49):DC(Y25) DA(X50):DT(Y24) DA(X51):DG(Y23) DA(X52):DT(Y22) DT(X53):DG(Y21) DG(X54):DT(Y20) DA(X55):DT(Y19) DC(X56):DC(Y18) DT(X57):DT(Y17) DC(X58):DA(Y16) DC(X59):DT(Y15) DA(X60):DT(Y14) DT(X61):DT(Y13) DG(X62):DT(Y12) DG(X63):DA(Y11) chainR ( 41) VAL41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LEU73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) GLU253 0 0 0 0 0 1 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) ASN395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) VAL397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) PHE425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) LEU440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) PHE442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) VAL448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) GLN484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) ASN485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) VAL487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) PHE516 0 0 0 0 0 0 0 0 0 0 0 2 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (398) PRO517 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) LEU531 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) PHE533 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) VAL539 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (422) THR541 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mpvcknchgteferdlsnanndlvckacgvvsednpivseVaLeSreatlnnarrklravsyalhipeyitdaafqwyklalannfvqgrrsqnviasclyvacrkekthhmlidfssrlqvsvysigatflkmvkklhitelpladpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeEtlqqrlnefkntkaaklsvqkfrendvedgearppsfvknrkkesgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvtgakseddsklasrkyariiqkigfaakftdfkiQNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkmsgsprnlhllpttdtylskvsddpdnledvddeelnahllneeasklkeriwiglnadflleqeskrlkqeadia >6cnf_ABEPRS:"Winged_helix"_DNA-binding_domain;NTF2-like;TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon;Homeodomain-like; title=YEAST RNA POLYMERASE III ELONGATION COMPLEX organism=? DNA sequence DT(X1):DA(Y79) DT(X2):DA(Y78) DC(X3):DG(Y77) DA(X4):DT(Y76) DA(X5):DT(Y75) DC(X6):DG(Y74) DA(X7):DT(Y73) DT(X8):DA(Y72) DA(X9):DT(Y71) DT(X10):DA(Y70) DA(X11):DT(Y69) DT(X12):DA(Y68) DT(X13):DA(Y67) DA(X14):DT(Y66) DG(X15):DC(Y65) DT(X16):DA(Y64) DA(X17):DT(Y63) DA(X18):DT(Y62) DT(X19):DA(Y61) DA(X20):DT(Y60) DC(X21):DG(Y59) DT(X22):DA(Y58) DT(X23):DA(Y57) DT(X24):DA(Y56) DT(X25):DA(Y55) DT(X26):DA(Y54) DC(X27):DG(Y53) DT(X28):DA(Y52) DG(X29):DC(Y51) DC(X62):DG(Y18) DC(X63):DG(Y17) DA(X64):DT(Y16) DA(X65):DT(Y15) DG(X66):DC(Y14) DT(X67):DA(Y13) DT(X68):DA(Y12) DG(X69):DC(Y11) DG(X70):DC(Y10) DT(X71):DA(Y9) DT(X72):DA(Y8) DA(X73):DT(Y7) DA(X74):DT(Y6) DG(X75):DC(Y5) DG(X76):DC(Y4) DC(X77):DG(Y3) DG(X78):DC(Y2) DT(X79):DA(Y1) chainA (1341) ARG1373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (445) SER480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainP chainR ( 45) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) GLU253 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) THR254 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) GLN257 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) ASN395 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) VAL397 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) PHE425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) LEU440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) PHE442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) VAL448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) THR450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) ASN485 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) VAL487 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) PHE516 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (398) PRO517 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) LEU531 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) PHE533 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) VAL539 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (422) THR541 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainS (100) TYR416 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqrrclhcgalngvvkkaaagagsaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpamlpgssngggkvkpirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavktaetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpsendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalkan/deintaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfekSrkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsadapnpnnvnvqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm/qlsdnaktlhsqmmskgigalftqqelqkqmgigsltdlmsivqelldknliklvkqndelkfqgvleseaqkkatmsaeealvysyieasgregiwsktikartnlhqhvvlkclkslesqryvksvksvkfptrkiymlyslqpsvdeldiefinslltivwrfisentfpngfknfengpkknvfyapnvknysttqeilefitaaqvanveltpsnirslcevlvyddklekvthdcyrvtlesilqmsifnyfkmfpaskhdkevvyfdewt/mpvcknchgteferdlsnanndlvckacgvvsednpivsevaleSreatlnnarrklravsyalhipeyitdaafqwyklalannfvqgrrsqnviasclyvacrkekthhmlidfssrlqvsvysigatflkmvkklhitelpladpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeETlqQrlnefkntkaaklsvqkfrendvedgearppsfvknrkkesgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkmsgsprnlhllpttdtylskvsddpdnledvddeelnahllneeasklkeriwiglnadflleqeskrlkqeadia/xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtaiqlklnpdgtmaideetmvvdrhknasieneykekvdenpfanlynygsygrgsYtdpwtveemikfykalsmwgtdfnlisqlypyrsrkqvkakfvneekkrpilielalrsklppnfdeycceikknigtvadfneklielqnehkhhmkeieeakntakeedqtaqrl >6cnf_R:TATA-box_binding_protein-like;Cyclin-like;Zinc_beta-ribbon; title=YEAST RNA POLYMERASE III ELONGATION COMPLEX organism=? DNA sequence DC(Y11):DT(X79) DA(Y12):DG(X78) DA(Y13):DC(X77) DC(Y14):DG(X76) DT(Y15):DG(X75) DT(Y16):DA(X74) DG(Y17):DA(X73) DG(Y18):DT(X72) DC(Y19):DT(X71) DC(Y20):DG(X70) DA(Y21):DG(X69) DT(Y22):DT(X68) DG(Y23):DT(X67) DG(Y24):DG(X66) DA(Y25):DA(X65) DG(Y26):DA(X64) DT(Y27):DC(X63) DA(Y50):DC(X62) DC(Y51):DG(X29) DA(Y52):DT(X28) DG(Y53):DC(X27) DA(Y54):DT(X26) DA(Y55):DT(X25) DA(Y56):DT(X24) DA(Y57):DT(X23) DA(Y58):DT(X22) DG(Y59):DC(X21) DT(Y60):DA(X20) DA(Y61):DT(X19) DT(Y62):DA(X18) DT(Y63):DA(X17) DA(Y64):DT(X16) DC(Y65):DG(X15) DT(Y66):DA(X14) DA(Y67):DT(X13) DA(Y68):DT(X12) DT(Y69):DA(X11) DA(Y70):DT(X10) DT(Y71):DA(X9) DA(Y72):DT(X8) DT(Y73):DA(X7) DG(Y74):DC(X6) DT(Y75):DA(X5) DT(Y76):DA(X4) DG(Y77):DC(X3) DA(Y78):DT(X2) DA(Y79):DT(X1) chainR ( 41) VAL41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LEU73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) GLU253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 (224) THR254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (227) GLN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (276) ASN395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) VAL397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 (306) PHE425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) LEU440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) PHE442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) VAL448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) THR450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) ASN485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (368) VAL487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (397) PHE516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 (398) PRO517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (412) LEU531 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 (414) PHE533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (420) VAL539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (422) THR541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mpvcknchgteferdlsnanndlvckacgvvsednpivseVALeSreatlnnarrklravsyalhipeyitdaafqwyklalannfvqgrrsqnviasclyvacrkekthhmlidfssrlqvsvysigatflkmvkklhitelpladpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeETlqQrlnefkntkaaklsvqkfrendvedgearppsfvknrkkesgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkmsgsprnlhllpttdtylskvsddpdnledvddeelnahllneeasklkeriwiglnadflleqeskrlkqeadia >6cnp_A:DNA-binding_domain; title=CRYSTAL STRUCTURE OF MBD2 COMPLEX WITH METHYLATED CPG ISLAND organism=HOMO SAPIENS DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DC(D3):DG(C10) DA(D4):DT(C9) DC(D5):DG(C8) 5CM(D6):DG(C7) DG(D7):5CM(C6) DG(D8):DC(C5) DT(D9):DA(C4) DG(D10):DC(C3) DG(D11):DC(C2) DC(D12):DG(C1) chainA ( 19) ARG166 0 0 0 0 0 14 17 0 0 0 0 0 ( 29) ASP176 0 0 0 0 0 1 3 0 0 0 0 0 ( 31) TYR178 0 0 0 0 0 0 1 1 0 0 0 0 ( 39) LYS186 0 0 0 0 0 0 0 0 1 0 0 0 ( 41) ARG188 0 0 0 0 0 20 13 3 0 0 0 0 prot.sequence krmdcpalppgwkkeeviRksglsagksDvYyfspsgkKfRskpqlarylgntvdlssfdfrtgkmmp >6cnq_B:DNA-binding_domain; title=MBD2 IN COMPLEX WITH METHYLATED DNA organism=HOMO SAPIENS DNA sequence DG(E1):DC(F12) DC(E2):DG(F11) DC(E3):DG(F10) DA(E4):DT(F9) DA(E5):DT(F8) 5CM(E6):DG(F7) DG(E7):5CM(F6) DT(E8):DA(F5) DT(E9):DA(F4) DG(E10):DC(F3) DG(E11):DC(F2) DC(E12):DG(F1) chainB ( 19) ARG166 0 0 0 0 0 12 15 0 0 0 0 0 ( 29) ASP176 0 0 0 0 0 1 3 0 0 0 0 0 ( 31) TYR178 0 0 0 0 0 0 1 2 0 0 0 0 ( 41) ARG188 0 0 0 0 0 17 12 3 0 0 0 0 prot.sequence krmdcpalppgwkkeeviRksglsagksdvYyfspsgkkfRskpqlarylgntvdlssfdfrtgkmmp >6cpq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 8-CLG IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE CTP organism=Homo sapiens DNA sequence DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 1 6 0 0 0 0 0 0 0 (262) TYR271 8 0 0 0 0 0 0 0 0 0 (274) ARG283 4 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6cq2_A:Prokaryotic_type_I_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TOPOISOMERASE I IN COMPLEX WITH OLIGONUCLEOTIDE MTS2-12 AND MAGNESIUM organism=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) DNA sequence DT(B1) DT(B2) DC(B3) DC(B4) DG(B5) DC(B6) DT(B7) DT(B8) DG(B9) DA(B10) chainA ( 33) HIS48 0 0 0 0 4 3 0 0 0 0 ( 36) ASP51 0 0 0 3 4 0 0 0 0 0 ( 39) ARG54 0 0 4 0 0 0 0 0 0 0 ( 40) ALA55 0 1 0 0 0 0 0 0 0 0 ( 74) LYS89 0 0 0 0 0 0 2 3 0 0 (152) ARG167 0 0 0 4 0 0 0 0 0 0 (153) ARG168 0 0 10 18 0 0 0 0 0 0 (157) ARG172 0 0 15 0 0 0 0 0 0 0 (161) TYR176 0 37 18 0 0 0 0 0 0 0 (164) SER179 0 1 0 0 0 0 0 0 0 0 (165) PRO180 0 1 0 0 0 0 0 0 0 0 (168) TRP183 43 9 0 0 0 0 0 0 0 0 (173) PRO188 1 0 0 0 0 0 0 0 0 0 (174) LYS189 2 0 0 0 0 0 0 0 0 0 (329) ARG344 0 0 0 0 0 0 5 0 0 0 (519) SER535 0 0 0 0 0 0 1 0 0 0 (520) THR536 0 0 0 0 1 0 0 0 0 0 prot.sequence sgrrlvivesptkarklasylgsgyivessrgHirDlpRAasdvpakyksqpwarlgvnvdadfeplyiispeKrstvselrgllkdvdelylatdgdregeaiawhlletlkpripvkrmvfheitepairaaaehprdldidlvdaqetRRildRlygYevSPvlWkkvaPKlsagrvqsvatriivarerdrmafrsaaywdilakldasvsdpdaapptfsarltavagrrvatgrdfdslgtlrkgdevivldegsatalaagldgtqltvasaeekpyarrpyppfmtstlqqeasrklrfsaertmsiaqrlyengyitymRtdsttlsesainaartqarqlygdeyvapaprqytrkvknaqeheairpagetfatpdavrreldgpniddfrlyeliwqrtvasqmadargmtlslritgmsghqevvfsatgrtltfpgflkayvetvdelvggeaddaerrlphltpgqrldiveltpdghatnpparyteaslvkaleelgigrpSTyssiiktiqdrgyvhkkgsalvpswvafavtglleqhfgrlvdydftaamedeldeiaagnerrtnwlnnfyfggdhgvpdsvarsgglkklvginlegidarevnsiklfddthgrpiyvrvgkngpylerlvagdtgeptpqranlsdsitpdeltlqvaeelfat >6cqi_A:Prokaryotic_type_I_DNA_topoisomerase; title=2.42A CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TOPOISOMERASE I IN COMPLEX WITH AN OLIGONUCLEOTIDE MTS2-11 organism=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) DNA sequence DT(B2) DT(B3) DC(B4) DC(B5) DG(B6) DC(B7) DT(B8) DT(B9) DG(B10) DA(B11) chainA ( 33) HIS48 0 0 0 0 5 6 0 0 0 0 ( 36) ASP51 0 0 0 4 4 0 0 0 0 0 ( 39) ARG54 0 0 2 0 0 0 0 0 0 0 ( 40) ALA55 0 1 0 0 0 0 0 0 0 0 ( 74) LYS89 0 0 0 0 0 1 2 1 0 0 (152) ARG167 0 0 0 5 0 0 0 0 0 0 (153) ARG168 0 0 11 19 0 0 0 0 0 0 (157) ARG172 0 0 14 0 0 0 0 0 0 0 (161) TYR176 0 39 18 0 0 0 0 0 0 0 (164) SER179 0 2 0 0 0 0 0 0 0 0 (165) PRO180 0 2 0 0 0 0 0 0 0 0 (168) TRP183 44 14 0 0 0 0 0 0 0 0 (173) PRO188 2 0 0 0 0 0 0 0 0 0 (174) LYS189 2 0 0 0 0 0 0 0 0 0 (314) GLN332 0 0 0 0 0 0 0 3 0 0 (326) ARG344 0 0 0 0 0 0 5 0 0 0 (516) SER535 0 0 0 0 0 1 2 0 0 0 (517) THR536 0 0 0 0 1 0 0 0 0 0 prot.sequence sgrrlvivesptkarklasylgsgyivessrgHirDlpRAasdvpakyksqpwarlgvnvdadfeplyiispeKrstvselrgllkdvdelylatdgdregeaiawhlletlkpripvkrmvfheitepairaaaehprdldidlvdaqetRRildRlygYevSPvlWkkvaPKlsagrvqsvatriivarerdrmafrsaaywdilakldasvsdpdptfsarltavagrrvatgrdfdslgtlrkgdevivldegsatalaagldgtqltvasaeekpyarrpyppfmtstlqqeasrklrfsaertmsiaQrlyengyitymRtdsttlsesainaartqarqlygdeyvapaprqytrkvkaqeaheairpagetfatpdavrreldgpniddfrlyeliwqrtvasqmadargmtlslritgmsghqevvfsatgrtltfpgflkayvetvdelvggeaddaerrlphltpgqrldiveltpdghatnpparyteaslvkaleelgigrpSTyssiiktiqdrgyvhkkgsalvpswvafavtglleqhfgrlvdydftaamedeldeiaagnerrtnwlnnfyfggdhgvpdsvarsgglkklvginlegidarevnsiklfddthgrpiyvrvgkngpylerlvagdtgeptpqranlsdsitpdeltlqvaeelfat >6cr3_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CBR2, BETA, GAMMA DATP ANALOGUE organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 32 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6cr4_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH DATP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 34 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6cr5_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CH2-BETA, GAMMA DATP ANALOGUE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 32 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6cr6_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CH-CH3, BETA, GAMMA DATP ANALOGUE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 28 0 0 0 0 ( 26) LYS35 7 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6cr7_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CHF, BETA, GAMMA DATP ANALOGUE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 29 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6cr8_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CHCL (R & S ISOMERS), BETA, GAMMA DATP ANALOGUE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 31 ( 26) LYS35 0 0 0 0 2 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6cr9_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CFCL, BETA, GAMMA DATP ANALOGUE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 31 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6crb_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CF2, BETA, GAMMA DATP ANALOGUE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 29 ( 29) LYS35 0 0 0 0 7 ( 32) ALA38 0 0 0 0 5 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6crc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CCL2, BETA, GAMMA DATP ANALOGUE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 31 ( 29) LYS35 0 0 0 0 6 ( 32) ALA38 0 0 0 0 5 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6crh_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 8-CLG IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE GTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 38 0 0 0 0 ( 29) LYS35 8 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6crm_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF RECQ CATALYTIC CORE FROM C. SAKAZAKII BOUND TO AN UNFOLDED G-QUADRUPLEX organism=CRONOBACTER SAKAZAKII (STRAIN ATCC BAA-894) / CRONOBACTER SAKAZAKII (STRAIN ATCC BAA-894) DNA sequence DG(B19) DG(B20) DG(B21) DT(B22) DC(B23) DG(B24) DG(B25) DT(B26) DG(B27) DC(B28) DC(B29) DT(B30) DT(B31) DA(B32) chainA ( 97) ARG101 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (100) GLN104 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (120) GLU124 0 0 0 0 0 0 0 0 5 7 0 0 0 0 (149) GLN153 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (150) TRP154 0 0 0 0 0 0 0 10 0 0 0 0 0 0 (154) PHE158 0 0 0 0 0 0 0 35 16 0 0 0 0 0 (155) ARG159 0 0 0 0 0 0 0 0 13 0 0 0 0 0 (216) LYS220 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (239) CYS243 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (240) ASN244 0 0 6 0 5 2 0 0 0 0 0 0 0 0 (241) SER245 0 0 9 0 0 0 0 0 0 0 0 0 0 0 (244) LYS248 0 0 22 0 0 0 0 0 0 0 0 0 0 0 (308) ASP312 0 0 13 0 0 0 0 0 0 0 0 0 0 0 (311) ARG315 0 0 0 0 0 8 13 0 0 0 0 0 0 0 (340) ASP344 0 0 1 0 5 0 0 0 0 0 0 0 0 0 (343) TRP347 0 0 0 0 46 2 0 0 0 0 0 0 0 0 (347) CYS351 0 0 0 0 0 11 0 0 0 0 0 0 0 0 (350) GLU354 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (351) LYS355 0 0 0 0 0 6 3 0 0 0 0 0 0 0 prot.sequence evysqetlakqvlqetfgyqqfrpgqatiidavlegrdclvvmptgggkslcyqipalvktgltivvsplislmkdqvdqllangvaaaclnstqsReeQqavlagcrtgqvrllyiapErlmmdnfidtlgywdlamvavdeahcisQWghdFRpeyaalgqlrarfpavpfmaltataddttrrdivrllglddplieissfdrpnirymlmeKfkpldqlmryvqeqrgksgiiyCNSraKvedtaarlqsrgisaaayhaglehevrasvqekfqrddlqivvatvafgmginkpnvrfvvhfDipRniesyyqetgragrdglpaeamlfydpaDmaWlrrCleEKapgplqdierhklnamgafaeaqtcrrlvllnyfgegrqapcgncdicldpprrydglvdaqkalsaiarveqrfgmgyvvevlrgannqrirelghdklkvygigrdqsqehwvsvirqlihlgvvtqniaqhsalqlteaarpflrgeaplmlavprva >6cro_A:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF LAMBDA-CRO BOUND TO A CONSENSUS OPERATOR AT 3.0 ANGSTROM RESOLUTION organism=Enterobacteria phage lambda DNA sequence DG(U2):DC(R20) DT(U3):DA(R19) DA(U4):DT(R18) DT(U5):DA(R17) DC(U6):DG(R16) DA(U7):DT(R15) DC(U8):DG(R14) DC(U9):DG(R13) DC(U10):DG(R12) DG(U11):DC(R11) DC(U12):DG(R10) DG(U13):DC(R9) DG(U14):DC(R8) DT(U15):DA(R7) DG(U16):DC(R6) DA(U17):DT(R5) DT(U18):DA(R4) DA(U19):DT(R3) DG(U20):DC(R2) chainA ( 16) THR17 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 25) TYR26 0 0 0 0 8 0 0 0 0 0 0 0 0 0 8 0 0 0 0 ( 26) GLN27 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 ( 27) SER28 0 0 0 3 9 5 0 0 0 0 0 0 0 5 9 3 0 0 0 ( 28) ALA29 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 30) ASN31 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 ( 31) LYS32 0 0 0 0 0 0 13 10 0 0 0 10 13 0 0 0 0 0 0 prot.sequence eqritlkdyamrfgqTktakdlgvYQSAiNKaihagrkifltinadgsvyaeevkpfpsn >6cst_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF HUMAN DNA POLYMERASE KAPPA WITH DNA organism=HOMO SAPIENS DNA sequence DA(C5):DT(D14) DT(C6):DA(D13) DA(C7):DT(D12) DC(C8):DG(D11) DA(C9):DT(D10) DT(C10):DA(D9) DA(C11):DT(D8) DC(C12):DG(D7) DC(C13):DG(D6) chainA (345) SER417 0 0 0 0 0 0 1 0 0 (347) GLU419 0 0 0 0 0 0 0 0 1 (397) THR469 0 0 0 2 0 0 0 0 0 (440) ARG512 0 0 0 0 1 0 0 0 0 prot.sequence llrmglndnkagmegldkekinkiimeatkgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsmlstsnyharrfgvraampgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfiknsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthltrdgerksmSvErtfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiklknvnfevkTrastvssvvstaeeifaiakellkteidadfphplrlrlmgvRissfpn >6ct9_A: title=STRUCTURE OF THE HUMAN CGAS-DNA COMPLEX organism=Homo sapiens DNA sequence DA(C3):DT(B16) DT(C4):DA(B15) DT(C5):DA(B14) DG(C6):DC(B13) DC(C7):DG(B12) DC(C8):DG(B11) DG(C9):DC(B10) DA(C10):DT(B9) DA(C11):DT(B8) DG(C12):DC(B7) DA(C13):DT(B6) DC(C14):DG(B5) DG(C15):DC(B4) chainA ( 16) ARG176 0 0 0 0 0 0 0 0 0 2 7 3 0 prot.sequence gasklravleklklsRddistaagmvngvvdhllrrlkcdsafrgvgllntgsyyehvkisapnefdvmfklevpriqleeysntrayyfvkfkenplsqflegeilsaskmlskfrkiikeeindidvimkggspavtllisekisvditlalesksswpastqeglriqnwlsakvrkqlrlkpfylvpkhakgfqeetwrlsfshiekeilnnhgksktccenkeekccrkdclklmkylleqlkerfkdkkhldkfssyhvktaffhvctqnpqdsqwdrkdlglcfdncvtyflqclrteklenyfipefnlfssnlidkrskefltkqieyernnefpvfde >6cta_A: title=STRUCTURE OF THE HUMAN CGAS-DNA COMPLEX WITH ATP organism=Homo sapiens DNA sequence DC(B4):DG(C15) DG(B5):DC(C14) DT(B6):DA(C13) DC(B7):DG(C12) DT(B8):DA(C11) DT(B9):DA(C10) DC(B10):DG(C9) DG(B11):DC(C8) DG(B12):DC(C7) DC(B13):DG(C6) DA(B14):DT(C5) DA(B15):DT(C4) DT(B16):DA(C3) chainA ( 16) ARG176 0 0 6 1 0 0 0 0 0 0 0 0 0 prot.sequence gasklravleklklsRddistaagmvngvvdhllrrlkcdsafrgvgllntgsyyehvkisapnefdvmfklevpriqleeysntrayyfvkfknplsqflegeilsaskmlskfrkiikeeindidvimkggspavtllisekisvditlalesksswpastqeglriqnwlsakvrkqlrlkpfylvpkhaqeetwrlsfshiekeilnnhgksktccenkeekccrkdclklmkylleqlkerfkdkkhldkfssyhvktaffhvctqnpqdsqwdrkdlglcfdncvtyflqclrteklenyfipefnlfssnlidkrskefltkqieyernnefpvfde >6cti_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CCL2, BETA, GAMMA DTTP ANALOGUE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 31 ( 26) LYS35 0 0 0 0 3 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6ctj_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CHCH3, BETA, GAMMA DTTP ANALOGUE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 46 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 1 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6ctk_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CHF-R/S ISOMERS, BETA, GAMMA DTTP ANALOGUE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 34 ( 26) LYS35 0 0 0 0 3 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6ctl_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CHCL-R/S ISOMERS, BETA, GAMMA DTTP ANALOGUE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 33 ( 26) LYS35 0 0 0 0 3 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6ctm_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CHCL(R-ISOMER), BETA, GAMMA DTTP ANALOGUE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 46 ( 26) LYS35 0 0 0 0 6 ( 29) ALA38 0 0 0 0 1 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6ctn_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CFCL,BETA-GAMMA DTTP ANALOGUE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 32 ( 26) LYS35 0 0 0 0 2 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6cto_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CF2, BETA, GAMMA DTTP ANALOGUE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 31 0 0 0 0 ( 26) LYS35 2 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6ctq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH DCTP organism=HOMO SAPIENS DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 34 ( 26) LYS35 0 0 0 0 6 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6ctr_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CHF (R & S ISOMERS), BETA, GAMMA DCTP ANALOGUE organism=HOMO SAPIENS DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 34 ( 26) LYS35 0 0 0 0 6 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6ctt_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CHCL (R & S ISOMERS, BETA, GAMMA DCTP ANALOGUE organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6ctu_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CFCL, BETA, GAMMA DCTP ANALOGUE organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 6 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6ctv_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CF2, BETA, GAMMA DCTP ANALOGUE organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 6 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6ctw_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CCL2, BETA, GAMMA DCTP ANALOGUE organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 34 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6ctx_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CBR2, BETA, GAMMA DCTP ANALOGUE organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 34 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkilekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6cu9_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 8-CLG IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE CTP AND MANGANESE organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DA(P10):DT(T7) chainA (225) LYS234 0 0 0 0 0 0 0 5 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 8 (274) ARG283 0 0 0 0 0 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6cua_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 8-CLG IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE GTP AND MANGANESE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 38 0 0 0 0 ( 29) LYS35 8 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6cub_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 8-CLG IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE ATP AND MANGANESE organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 35 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 5 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6cuu_CDF: title=THERMUS THERMOPHILES RNA POLYMERASE IN COMPLEX WITH PROMOTER DNA AND ANTIBIOTIC KANGLEMYCIN A organism=? DNA sequence DT(G3):DA(H25) DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DA(G9):DT(H19) DG(G10):DC(H18) DA(G11):DT(H17) DG(G12):DC(H16) chainC (416) ARG422 0 0 0 0 0 0 0 0 0 37 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapGdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqlttqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6d0m_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POLYMERASE ETA POST-INSERTION BINARY COMPLEX WITH CYTARABINE (ARAC) organism=Homo sapiens DNA sequence DG(T4):CAR(P9) DA(T5):DT(P8) DC(T6):DG(P7) DA(T7):DT(P6) DG(T8):DC(P5) DT(T9):DA(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 21) PHE18 1 0 0 0 0 0 0 0 0 ( 41) GLN38 3 0 0 0 0 0 0 0 0 ( 51) ILE48 7 0 0 0 0 0 0 0 0 ( 64) ARG61 21 0 0 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 0 2 5 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftviknmntsgiqtewsppltmlflcatkfsas >6d0z_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POLYMERASE ETA CYTARABINE (ARAC) EXTENSION TERNARY COMPLEX organism=Homo sapiens DNA sequence DC(T6):DG(P7) DA(T7):DT(P6) DG(T8):DC(P5) DT(T9):DA(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (380) ARG382 0 0 0 0 3 7 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftviknmntsgiqtewsppltmlflcatkfsas >6d1t_A:DNA-binding_domain; title=COMPLEX OF MBD1-MBD AND METHYLATED DNA organism=HOMO SAPIENS DNA sequence DG(B1):DC(C12) DC(B2):DG(C11) DC(B3):DG(C10) DA(B4):DT(C9) DA(B5):DT(C8) 5CM(B6):DG(C7) DG(B7):5CM(C6) DT(B8):DA(C5) DT(B9):DA(C4) DG(B10):DC(C3) DG(B11):DC(C2) DC(B12):DG(C1) chainA ( 21) ARG22 0 0 0 0 0 19 14 0 0 0 0 0 ( 26) THR27 0 0 0 0 0 0 0 1 0 0 0 0 ( 29) ARG30 0 0 0 0 0 0 1 9 3 1 0 0 ( 31) ASP32 0 0 0 0 0 3 0 0 0 0 0 0 ( 33) TYR34 0 0 0 0 1 1 0 0 0 0 0 0 ( 43) ARG44 0 0 0 0 2 13 22 0 0 0 0 0 prot.sequence aedwldcpalgpgwkrrevfRksgaTcgRsdtYyqsptgdriRskveltrylgpacdltlfdfkqgil >6d5f_C: title=CRYO-EM RECONSTRUCTION OF MEMBRANE-ENVELOPED FILAMENTOUS VIRUS SFV1 (SULFOLOBUS FILAMENTOUS VIRUS 1) organism=SULFOLOBUS FILAMENTOUS VIRUS 1 DNA sequence DT(11):DA(2336) DA(12):DT(2335) DT(13):DA(2334) DA(14):DT(2333) DT(15):DA(2332) DA(16):DT(2331) DT(17):DA(2330) DA(18):DT(2329) DT(19):DA(2328) DA(110):DT(2327) DT(111):DA(2326) DA(112):DT(2325) DT(113):DA(2324) DA(114):DT(2323) DT(115):DA(2322) DA(116):DT(2321) DT(117):DA(2320) DA(118):DT(2319) DT(119):DA(2318) DA(120):DT(2317) DT(121):DA(2316) DA(122):DT(2315) DT(123):DA(2314) DA(124):DT(2313) DT(125):DA(2312) DA(126):DT(2311) DT(127):DA(2310) DA(128):DT(2309) DT(129):DA(2308) DA(130):DT(2307) DT(131):DA(2306) DA(132):DT(2305) DT(133):DA(2304) DA(134):DT(2303) DT(135):DA(2302) DA(136):DT(2301) DT(137):DA(2300) DA(138):DT(2299) DT(139):DA(2298) DA(140):DT(2297) DT(141):DA(2296) DA(142):DT(2295) DT(143):DA(2294) DA(144):DT(2293) DT(145):DA(2292) DA(146):DT(2291) DT(147):DA(2290) DA(148):DT(2289) DT(149):DA(2288) DA(150):DT(2287) DT(151):DA(2286) DA(152):DT(2285) DT(153):DA(2284) DA(154):DT(2283) DT(155):DA(2282) DA(156):DT(2281) DT(157):DA(2280) DA(158):DT(2279) DT(159):DA(2278) DA(160):DT(2277) DT(161):DA(2276) DA(162):DT(2275) DT(163):DA(2274) DA(164):DT(2273) DT(165):DA(2272) DA(166):DT(2271) DT(167):DA(2270) DA(168):DT(2269) DT(169):DA(2268) DA(170):DT(2267) DT(171):DA(2266) DA(172):DT(2265) DT(173):DA(2264) DA(174):DT(2263) DT(175):DA(2262) DA(176):DT(2261) DT(177):DA(2260) DA(178):DT(2259) DT(179):DA(2258) DA(180):DT(2257) DT(181):DA(2256) DA(182):DT(2255) DT(183):DA(2254) DA(184):DT(2253) DT(185):DA(2252) DA(186):DT(2251) DT(187):DA(2250) DA(188):DT(2249) DT(189):DA(2248) DA(190):DT(2247) DT(191):DA(2246) DA(192):DT(2245) DT(193):DA(2244) DA(194):DT(2243) DT(195):DA(2242) DA(196):DT(2241) DT(197):DA(2240) DA(198):DT(2239) DT(199):DA(2238) DA(1100):DT(2237) DT(1101):DA(2236) DA(1102):DT(2235) DT(1103):DA(2234) DA(1104):DT(2233) DT(1105):DA(2232) DA(1106):DT(2231) DT(1107):DA(2230) DA(1108):DT(2229) DT(1109):DA(2228) DA(1110):DT(2227) DT(1111):DA(2226) DA(1112):DT(2225) DT(1113):DA(2224) DA(1114):DT(2223) DT(1115):DA(2222) DA(1116):DT(2221) DT(1117):DA(2220) DA(1118):DT(2219) DT(1119):DA(2218) DA(1120):DT(2217) DT(1121):DA(2216) DA(1122):DT(2215) DT(1123):DA(2214) DA(1124):DT(2213) DT(1125):DA(2212) DA(1126):DT(2211) DT(1127):DA(2210) DA(1128):DT(2209) DT(1129):DA(2208) DA(1130):DT(2207) DT(1131):DA(2206) DA(1132):DT(2205) DT(1133):DA(2204) DA(1134):DT(2203) DT(1135):DA(2202) DA(1136):DT(2201) DT(1137):DA(2200) DA(1138):DT(2199) DT(1139):DA(2198) DA(1140):DT(2197) DT(1141):DA(2196) DA(1142):DT(2195) DT(1143):DA(2194) DA(1144):DT(2193) DT(1145):DA(2192) DA(1146):DT(2191) DT(1147):DA(2190) DA(1148):DT(2189) DT(1149):DA(2188) DA(1150):DT(2187) DT(1151):DA(2186) DA(1152):DT(2185) DT(1153):DA(2184) DA(1154):DT(2183) DT(1155):DA(2182) DA(1156):DT(2181) DT(1157):DA(2180) DA(1158):DT(2179) DT(1159):DA(2178) DA(1160):DT(2177) DT(1161):DA(2176) DA(1162):DT(2175) DT(1163):DA(2174) DA(1164):DT(2173) DT(1165):DA(2172) DA(1166):DT(2171) DT(1167):DA(2170) DA(1168):DT(2169) DT(1169):DA(2168) DA(1170):DT(2167) DT(1171):DA(2166) DA(1172):DT(2165) DT(1173):DA(2164) DA(1174):DT(2163) DT(1175):DA(2162) DA(1176):DT(2161) DT(1177):DA(2160) DA(1178):DT(2159) DT(1179):DA(2158) DA(1180):DT(2157) DT(1181):DA(2156) DA(1182):DT(2155) DT(1183):DA(2154) DA(1184):DT(2153) DT(1185):DA(2152) DA(1186):DT(2151) DT(1187):DA(2150) DA(1188):DT(2149) DT(1189):DA(2148) DA(1190):DT(2147) DT(1191):DA(2146) DA(1192):DT(2145) DT(1193):DA(2144) DA(1194):DT(2143) DT(1195):DA(2142) DA(1196):DT(2141) DT(1197):DA(2140) DA(1198):DT(2139) DT(1199):DA(2138) DA(1200):DT(2137) DT(1201):DA(2136) DA(1202):DT(2135) DT(1203):DA(2134) DA(1204):DT(2133) DT(1205):DA(2132) DA(1206):DT(2131) DT(1207):DA(2130) DA(1208):DT(2129) DT(1209):DA(2128) DA(1210):DT(2127) DT(1211):DA(2126) DA(1212):DT(2125) DT(1213):DA(2124) DA(1214):DT(2123) DT(1215):DA(2122) DA(1216):DT(2121) DT(1217):DA(2120) DA(1218):DT(2119) DT(1219):DA(2118) DA(1220):DT(2117) DT(1221):DA(2116) DA(1222):DT(2115) DT(1223):DA(2114) DA(1224):DT(2113) DT(1225):DA(2112) DA(1226):DT(2111) DT(1227):DA(2110) DA(1228):DT(2109) DT(1229):DA(2108) DA(1230):DT(2107) DT(1231):DA(2106) DA(1232):DT(2105) DT(1233):DA(2104) DA(1234):DT(2103) DT(1235):DA(2102) DA(1236):DT(2101) DT(1237):DA(2100) DA(1238):DT(299) DT(1239):DA(298) DA(1240):DT(297) DT(1241):DA(296) DA(1242):DT(295) DT(1243):DA(294) DA(1244):DT(293) DT(1245):DA(292) DA(1246):DT(291) DT(1247):DA(290) DA(1248):DT(289) DT(1249):DA(288) DA(1250):DT(287) DT(1251):DA(286) DA(1252):DT(285) DT(1253):DA(284) DA(1254):DT(283) DT(1255):DA(282) DA(1256):DT(281) DT(1257):DA(280) DA(1258):DT(279) DT(1259):DA(278) DA(1260):DT(277) DT(1261):DA(276) DA(1262):DT(275) DT(1263):DA(274) DA(1264):DT(273) DT(1265):DA(272) DA(1266):DT(271) DT(1267):DA(270) DA(1268):DT(269) DT(1269):DA(268) DA(1270):DT(267) DT(1271):DA(266) DA(1272):DT(265) DT(1273):DA(264) DA(1274):DT(263) DT(1275):DA(262) DA(1276):DT(261) DT(1277):DA(260) DA(1278):DT(259) DT(1279):DA(258) DA(1280):DT(257) DT(1281):DA(256) DA(1282):DT(255) DT(1283):DA(254) DA(1284):DT(253) DT(1285):DA(252) DA(1286):DT(251) DT(1287):DA(250) DA(1288):DT(249) DT(1289):DA(248) DA(1290):DT(247) DT(1291):DA(246) DA(1292):DT(245) DT(1293):DA(244) DA(1294):DT(243) DT(1295):DA(242) DA(1296):DT(241) DT(1297):DA(240) DA(1298):DT(239) DT(1299):DA(238) DA(1300):DT(237) DT(1301):DA(236) DA(1302):DT(235) DT(1303):DA(234) DA(1304):DT(233) DT(1305):DA(232) DA(1306):DT(231) DT(1307):DA(230) DA(1308):DT(229) DT(1309):DA(228) DA(1310):DT(227) DT(1311):DA(226) DA(1312):DT(225) DT(1313):DA(224) DA(1314):DT(223) DT(1315):DA(222) DA(1316):DT(221) DT(1317):DA(220) DA(1318):DT(219) DT(1319):DA(218) DA(1320):DT(217) DT(1321):DA(216) DA(1322):DT(215) DT(1323):DA(214) DA(1324):DT(213) DT(1325):DA(212) DA(1326):DT(211) DT(1327):DA(210) DA(1328):DT(29) DT(1329):DA(28) DA(1330):DT(27) DT(1331):DA(26) DA(1332):DT(25) DT(1333):DA(24) DA(1334):DT(23) DT(1335):DA(22) DA(1336):DT(21) chainC ( 1) MET1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) LYS4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) TYR18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) TYR29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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DA(2300):DT(137) DT(2301):DA(136) DA(2302):DT(135) DT(2303):DA(134) DA(2304):DT(133) DT(2305):DA(132) DA(2306):DT(131) DT(2307):DA(130) DA(2308):DT(129) DT(2309):DA(128) DA(2310):DT(127) DT(2311):DA(126) DA(2312):DT(125) DT(2313):DA(124) DA(2314):DT(123) DT(2315):DA(122) DA(2316):DT(121) DT(2317):DA(120) DA(2318):DT(119) DT(2319):DA(118) DA(2320):DT(117) DT(2321):DA(116) DA(2322):DT(115) DT(2323):DA(114) DA(2324):DT(113) DT(2325):DA(112) DA(2326):DT(111) DT(2327):DA(110) DA(2328):DT(19) DT(2329):DA(18) DA(2330):DT(17) DT(2331):DA(16) DA(2332):DT(15) DT(2333):DA(14) DA(2334):DT(13) DT(2335):DA(12) DA(2336):DT(11) chaind ( 3) THR6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 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TYR28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) MET35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ILE42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) PHE45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ASN65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ILE68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rrTgittedaitkYsvkakteqtaYknatkdMvvqaqnImnFYsvvnqalipwlnahgvggNlrIlyRQlaNeyvkvlntkqsgevikrlkialrhkywlrgldeamldefmdyidslkstttnyiifnmq >6d6v_A: title=CRYOEM STRUCTURE OF TETRAHYMENA TELOMERASE WITH TELOMERIC DNA AT 4.8 ANGSTROM RESOLUTION organism=TETRAHYMENA THERMOPHILA DNA sequence DG(C1) DT(C2) DT(C3) DG(C4) DG(C5) DG(C6) DG(C7) DT(C8) DT(C9) DG(C10) DG(C11) DG(C12) DG(C13) DT(C14) DT(C15) DG(C16) DG(C17) DG(C18) DG(C19) chainA (184) SER227 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (185) GLN228 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 (327) PHE414 0 0 0 0 0 0 0 0 0 0 0 5 15 0 0 0 0 0 0 (395) HIS482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (443) ILE545 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (453) LYS555 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 (488) ASN590 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (521) TYR623 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (645) GLN773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (776) ASN904 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (796) PHE924 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 (797) LEU925 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 prot.sequence qmltrkedlltvlkqisalkyvsnlyefllatekivqtseldtqfqefltttiiaseqnlvenykqkynqpnfsqltikqviddsiillgnkqnyvqqigtttigfyveyeninlsrqtlyssnfrnllnifgeedfkyflidflvftkveqngylqvagvclnqyfsvqkqenqyiypeiqrSQifycnhmgrepgvfkssffnyqsknfscqeerdlfleftekivqnfhninfnyllkkfcklpenyqslksqvkqivqsenkanqqscenlfnslydteisykqitnflrqiiqncvpnqllgkknfkvfleklyefvqmkrFenqkvldyicfmdvfdvewfvdlknqkftqkrkyisdkrkilgdlivfiinkivipvlrynfyitekHkegsqifyyrkpiwklvskltivkleefqkypqgklriipkkgsfrpImtflrkdkqKniklnlnqilmdsqlvfrnlkdmlgqkigysvfdNkqisekfaqfiekwknkgrpqlyyvtldikkcYdsidqmkllnffnqsdliqdtyfinkyllfqrnkrpllqiqnfpyyfnlkerqiayslyddddqilqkgfkeiqsddrpfivinqdkprcitkdiihnhlkhisqynvisfnkvkfrqkrgipQglnisgvlcsfyfgkleeeytqflknaeqvngsinllmrltddylfisdsqqnalnlivqlqncannngfmfndqkittnfqfpqedynlehfkisvqnecqwigksidmntleiksiqkqtqqeinqtiNvaisiknlksqlknklrslFLnqlidyfnpninsfeglcrqlyhhskatvmkfypfmtklfqidlkkskqysvqygkentnenflkdilyytvedvckilcylqfedeinsnikeifknlyswimwdiivsylkkkkqfkgylnkllqkirksrffylkegckslqlilsqqkyqlnkkeleaiefidlnnliqdiktlipkis >6d6v_AD:Nucleic_acid-binding_proteins; title=CRYOEM STRUCTURE OF TETRAHYMENA TELOMERASE WITH TELOMERIC DNA AT 4.8 ANGSTROM RESOLUTION organism=TETRAHYMENA THERMOPHILA DNA sequence DG(C1) DT(C2) DT(C3) DG(C4) DG(C5) DG(C6) DG(C7) DT(C8) DT(C9) DG(C10) DG(C11) DG(C12) DG(C13) DT(C14) DT(C15) DG(C16) DG(C17) DG(C18) DG(C19) chainA (184) SER227 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (185) GLN228 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 (327) PHE414 0 0 0 0 0 0 0 0 0 0 0 5 15 0 0 0 0 0 0 (395) HIS482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (443) ILE545 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (453) LYS555 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 (488) ASN590 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (521) TYR623 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (645) GLN773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (776) ASN904 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (796) PHE924 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 (797) LEU925 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 chainD ( 22) LYS532 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR552 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR553 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG554 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) LYS560 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) SER561 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) LEU563 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS564 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) HIS566 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) SER569 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) GLU573 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG588 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) MET601 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) PHE603 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS660 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qmltrkedlltvlkqisalkyvsnlyefllatekivqtseldtqfqefltttiiaseqnlvenykqkynqpnfsqltikqviddsiillgnkqnyvqqigtttigfyveyeninlsrqtlyssnfrnllnifgeedfkyflidflvftkveqngylqvagvclnqyfsvqkqenqyiypeiqrSQifycnhmgrepgvfkssffnyqsknfscqeerdlfleftekivqnfhninfnyllkkfcklpenyqslksqvkqivqsenkanqqscenlfnslydteisykqitnflrqiiqncvpnqllgkknfkvfleklyefvqmkrFenqkvldyicfmdvfdvewfvdlknqkftqkrkyisdkrkilgdlivfiinkivipvlrynfyitekHkegsqifyyrkpiwklvskltivkleefqkypqgklriipkkgsfrpImtflrkdkqKniklnlnqilmdsqlvfrnlkdmlgqkigysvfdNkqisekfaqfiekwknkgrpqlyyvtldikkcYdsidqmkllnffnqsdliqdtyfinkyllfqrnkrpllqiqnfpyyfnlkerqiayslyddddqilqkgfkeiqsddrpfivinqdkprcitkdiihnhlkhisqynvisfnkvkfrqkrgipQglnisgvlcsfyfgkleeeytqflknaeqvngsinllmrltddylfisdsqqnalnlivqlqncannngfmfndqkittnfqfpqedynlehfkisvqnecqwigksidmntleiksiqkqtqqeinqtiNvaisiknlksqlknklrslFLnqlidyfnpninsfeglcrqlyhhskatvmkfypfmtklfqidlkkskqysvqygkentnenflkdilyytvedvckilcylqfedeinsnikeifknlyswimwdiivsylkkkkqfkgylnkllqkirksrffylkegckslqlilsqqkyqlnkkeleaiefidlnnliqdiktlipkis/qriyssieeiiqqaqaseigqKkefyvygnlvsiqmknklyYYRctcqgKSvLKyHgdSffcEscqqfinpqvhlmlRafvqdstgtipvMiFdqqssqlinqidpsihvqeagqyvknciengqeeiirqlfskldfarfifeiqfenKefnneqeiaykvlkiekenikeeskyllkklehli >6d6v_D:Nucleic_acid-binding_proteins; title=CRYOEM STRUCTURE OF TETRAHYMENA TELOMERASE WITH TELOMERIC DNA AT 4.8 ANGSTROM RESOLUTION organism=TETRAHYMENA THERMOPHILA DNA sequence DG(C1) DT(C2) DT(C3) DG(C4) DG(C5) DG(C6) DG(C7) DT(C8) DT(C9) DG(C10) DG(C11) DG(C12) DG(C13) DT(C14) DT(C15) DG(C16) DG(C17) DG(C18) DG(C19) chainD ( 22) LYS532 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR552 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR553 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG554 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) LYS560 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) SER561 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) LEU563 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS564 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) HIS566 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) SER569 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) GLU573 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG588 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) MET601 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) PHE603 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS660 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qriyssieeiiqqaqaseigqKkefyvygnlvsiqmknklyYYRctcqgKSvLKyHgdSffcEscqqfinpqvhlmlRafvqdstgtipvMiFdqqssqlinqidpsihvqeagqyvknciengqeeiirqlfskldfarfifeiqfenKefnneqeiaykvlkiekenikeeskyllkklehli >6d8a_A:Ribonuclease_H-like; title=RSAGO TERNARY COMPLEX WITH GUIDE RNA AND TARGET DNA CONTAINING A-A BULGE WITHIN THE SEED SEGMENT OF THE TARGET STRAND organism=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) / Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) DNA sequence DT(G-13) DC(G-12) DG(G-11) DT(G-10) DC(G-9) DA(G-8) DC(G-7) DC(G-6) DT(G-5) DG(G-4) DT(G-3) DG(G-2) DC(G-1) DA(G0) DG(G1) DA(G2) DA(G3) DT(G4) DA(G5) DA(G6) DC(G7) chainA ( 26) PRO45 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TRP63 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS245 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 (310) TYR329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (322) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 (472) SER491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (475) TYR494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 (476) THR495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (479) ASN498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (587) ARG606 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (621) ASP640 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (637) TYR656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 (642) ALA661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (651) ARG670 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (668) SER687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (670) GLN689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (671) LEU690 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 (673) LYS692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (675) ALA694 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (708) SER727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (715) LEU734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (716) PRO735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 prot.sequence rqlvsngfevnlpdqvevivrdlpdPskvkeertrlmgywfvhWfdgklfhlrikaggpnvdgehrairtaehpwllrarlddaleealpkyaavkkrpftflaqkdelidaaataaglshrllnsfkviprfalspkiyepvdgttrvgvfvtigmrydieaslrdlleagidlrgmyvvrrkrqpgergllgrvraisddmvqlfeetdlasvnvndaklegsKenftrclsallghnykkllnalddqeagyrtgprfddavrrmgeflakkpirladninaqvgdrivfsnegqarnvrlapkveYvfdrtgaksaeYawrglsqfgpfdrpsfanrsprilvvypsstqgkvenflsafrdgmgsnysgfskgfvdlmgltkvefvmcpvevssadrngahtkynsaiedklagagevhagivvlfedharlpddrnpyihtksllltlgvptqqvrmptvllepkSlqYTlqNfsiatyaklngtpwtvnhdkaindelvvgmglaelsgsrtekrqrfvgittvfagdgsyllgnvskeceyegysdairesmtgilrelkkrnnwrpgdtvrvvfhahRplkrvdvasivfectreigsdqniqmafvtvshDhpfvlidrsergleaYkgstArkgvfappRgaisrvgrltrllavnSpQLiKrAntplptpllvslhpdstfkdvdylaeqalkftSlswrstLPaatpvtifyseriaellgrlksipnwssanlniklkwsrwfl >6d8f_A:Ribonuclease_H-like; title=RSAGO TERNARY COMPLEX WITH GUIDE RNA AND TARGET DNA CONTAINING T-T BULGE WITHIN THE SEED SEGMENT organism=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) / Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) DNA sequence DT(G-13) DC(G-12) DG(G-11) DT(G-10) DC(G-9) DA(G-8) DC(G-7) DC(G-6) DT(G-5) DG(G-4) DT(G-3) DG(G-2) DC(G-1) DA(G0) DG(G1) DT(G2) DT(G3) DT(G4) DA(G5) DA(G6) DC(G7) chainA ( 26) PRO45 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TRP63 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS245 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 (310) TYR329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (322) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 (472) SER491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (475) TYR494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 (476) THR495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (479) ASN498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (522) ARG541 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (587) ARG606 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (621) ASP640 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (651) ARG670 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (668) SER687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (670) GLN689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (671) LEU690 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 (673) LYS692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (708) SER727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (715) LEU734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (716) PRO735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 prot.sequence rqlvsngfevnlpdqvevivrdlpdPskvkeertrlmgywfvhWfdgklfhlrikaggpnvdgehrairtaehpwllrarlddaleealpkyaavkkrpftflaqkdelidaaataaglshrllnsfkviprfalspkiyepvdgttrvgvfvtigmrydieaslrdlleagidlrgmyvvrrkrqpgergllgrvraisddmvqlfeetdlasvnvndaklegsKenftrclsallghnykkllnalddqeagyrtgprfddavrrmgeflakkpirladninaqvgdrivfsnegqarnvrlapkveYvfdrtgaksaeYawrglsqfgpfdrpsfanrsprilvvypsstqgkvenflsafrdgmgsnysgfskgfvdlmgltkvefvmcpvevssadrngahtkynsaiedklagagevhagivvlfedharlpddrnpyihtksllltlgvptqqvrmptvllepkSlqYTlqNfsiatyaklngtpwtvnhdkaindelvvgmglaelsgsrtekRqrfvgittvfagdgsyllgnvskeceyegysdairesmtgilrelkkrnnwrpgdtvrvvfhahRplkrvdvasivfectreigsdqniqmafvtvshDhpfvlidrsergleaykgstarkgvfappRgaisrvgrltrllavnSpQLiKrantplptpllvslhpdstfkdvdylaeqalkftSlswrstLPaatpvtifyseriaellgrlksipnwssanlniklkwsrwfl >6d8p_B:Ribonuclease_H-like; title=TERNARY RSAGO COMPLEX CONTAINING GUIDE RNA PAIRED WITH TARGET DNA organism=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) / Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) DNA sequence DG(G-14) DT(G-13) DC(G-12) DG(G-11) DT(G-10) DC(G-9) DA(G-8) DC(G-7) DC(G-6) DT(G-5) DG(G-4) DT(G-3) DG(G-2) DC(G-1) DA(G0) DG(G1) DT(G2) DA(G3) DA(G4) DC(G5) chainB ( 26) PRO45 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TRP63 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) LYS245 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (304) TYR329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (316) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 8 (319) ARG344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (466) SER491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (469) TYR494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 (470) THR495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (473) ASN498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (581) ARG606 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 (615) ASP640 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (645) ARG670 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (662) SER687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (664) GLN689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (665) LEU690 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 (667) LYS692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (702) SER727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (709) LEU734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (710) PRO735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 prot.sequence rqlvsngfevnlpdqvevivrdlpdPskvkeertrlmgywfvhWfdgklfhlrikaggpnvdgehrairtaehpwllrarlddaleealpkyaavkkrpftflaqkdelidaaataaglshrllnsfkviprfalspkiyepvdgttrvgvfvtigmrydieaslrdlleagidlrgmyvvrrkrqrgllgrvsddmvqlfeetdlasvnvndaklegsKenftrclsallghnykkllnalddqeagyrtgprfddavrrmgeflakkpirladninaqvgdrivfsnegqarnvrlapkveYvfdrtgaksaeYawRglsqfgpfdrpsfanrsprilvvypsstqgkvenflsafrdgmgsnysgfskgfvdlmgltkvefvmcpvevssadrngahtkynsaiedklagagevhagivvlfedharlpddrnpyihtksllltlgvptqqvrmptvllepkSlqYTlqNfsiatyaklngtpwtvnhdkaindelvvgmglaelsgsrtekrqrfvgittvfagdgsyllgnvskeceyegysdairesmtgilrelkkrnnwrpgdtvrvvfhahRplkrvdvasivfectreigsdqniqmafvtvshDhpfvlidrsergleaykgstarkgvfappRgaisrvgrltrllavnSpQLiKrantplptpllvslhpdstfkdvdylaeqalkftSlswrstLPaatpvtifyseriaellgrlksipnwssanlniklkwsrwfl >6d92_F:Ribonuclease_H-like; title=TERNARY RSAGO COMPLEX WITH GUIDE RNA AND TARGET DNA CONTAINING A-A NON-CANONICAL PAIR AT POSITION 3 organism=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) / Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) DNA sequence DT(J-15) DG(J-14) DT(J-13) DC(J-12) DG(J-11) DT(J-10) DC(J-9) DA(J-8) DC(J-7) DC(J-6) DT(J-5) DG(J-4) DT(J-3) DG(J-2) DC(J-1) DA(J0) DG(J1) DA(J2) DA(J3) DA(J4) DC(J5) chainF ( 26) PRO45 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TRP63 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS245 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (310) TYR329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (322) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 7 (324) TRP343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (325) ARG344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (472) SER491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (475) TYR494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 (522) ARG541 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (587) ARG606 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 (621) ASP640 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (651) ARG670 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (668) SER687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (670) GLN689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (671) LEU690 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 (673) LYS692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (708) SER727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (715) LEU734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (716) PRO735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 prot.sequence rqlvsngfevnlpdqvevivrdlpdPskvkeertrlmgywfvhWfdgklfhlrikaggpnvdgehrairtaehpwllrarlddaleealpkyaavkkrpftflaqkdelidaaataaglshrllnsfkviprfalspkiyepvdgttrvgvfvtigmrydieaslrdlleagidlrgmyvvrrkrqpgergllgrvraisddmvqlfeetdlasvnvndaklegsKenftrclsallghnykkllnalddqeagyrtgprfddavrrmgeflakkpirladninaqvgdrivfsnegqarnvrlapkveYvfdrtgaksaeYaWRglsqfgpfdrpsfanrsprilvvypsstqgkvenflsafrdgmgsnysgfskgfvdlmgltkvefvmcpvevssadrngahtkynsaiedklagagevhagivvlfedharlpddrnpyihtksllltlgvptqqvrmptvllepkSlqYtlqnfsiatyaklngtpwtvnhdkaindelvvgmglaelsgsrtekRqrfvgittvfagdgsyllgnvskeceyegysdairesmtgilrelkkrnnwrpgdtvrvvfhahRplkrvdvasivfectreigsdqniqmafvtvshDhpfvlidrsergleaykgstarkgvfappRgaisrvgrltrllavnSpQLiKrantplptpllvslhpdstfkdvdylaeqalkftSlswrstLPaatpvtifyseriaellgrlksipnwssanlniklkwsrwfl >6d95_A:Ribonuclease_H-like; title=TERNARY RSAGO COMPLEX WITH GUIDE RNA PAIRED AND TARGET DNA CONTAINING A8-A8' NON-CANONICAL PAIR organism=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) / Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) DNA sequence DT(C-13) DC(C-12) DG(C-11) DT(C-10) DC(C-9) DA(C-8) DC(C-7) DC(C-6) DT(C-5) DG(C-4) DA(C-3) DG(C-2) DC(C-1) DA(C0) DG(C1) DT(C2) DA(C3) DA(C4) DC(C5) chainA ( 26) PRO45 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TRP63 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS245 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 (310) TYR329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (322) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 5 (472) SER491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (475) TYR494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 (476) THR495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (479) ASN498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (587) ARG606 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (621) ASP640 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (651) ARG670 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (668) SER687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (670) GLN689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (671) LEU690 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 (673) LYS692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (708) SER727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (715) LEU734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (716) PRO735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 prot.sequence rqlvsngfevnlpdqvevivrdlpdPskvkeertrlmgywfvhWfdgklfhlrikaggpnvdgehrairtaehpwllrarlddaleealpkyaavkkrpftflaqkdelidaaataaglshrllnsfkviprfalspkiyepvdgttrvgvfvtigmrydieaslrdlleagidlrgmyvvrrkrqpgergllgrvraisddmvqlfeetdlasvnvndaklegsKenftrclsallghnykkllnalddqeagyrtgprfddavrrmgeflakkpirladninaqvgdrivfsnegqarnvrlapkveYvfdrtgaksaeYawrglsqfgpfdrpsfanrsprilvvypsstqgkvenflsafrdgmgsnysgfskgfvdlmgltkvefvmcpvevssadrngahtkynsaiedklagagevhagivvlfedharlpddrnpyihtksllltlgvptqqvrmptvllepkSlqYTlqNfsiatyaklngtpwtvnhdkaindelvvgmglaElsgsrtekrqrfvgittvfagdgsyllgnvskeceyegysdairesmtgilrelkkrnnwrpgdtvrvvfhahRplkrvdvasivfectreigsdqniqmafvtvshDhpfvlidrsergleaykgstarkgvfappRgaisrvgrltrllavnSpQLiKrantplptpllvslhpdstfkdvdylaeqalkftSlswrstLPaatpvtifyseriaellgrlksipnwssanlniklkwsrwfl >6d9k_F:Ribonuclease_H-like; title=TERNARY RSAGO COMPLEX WITH GUIDE RNA AND TARGET DNA CONTAINING A-G NON-CANONICAL PAIR organism=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) / Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) DNA sequence DT(J-15) DG(J-14) DT(J-13) DC(J-12) DG(J-11) DT(J-10) DC(J-9) DA(J-8) DC(J-7) DC(J-6) DT(J-5) DG(J-4) DG(J-3) DG(J-2) DC(J-1) DA(J0) DG(J1) DT(J2) DA(J3) DA(J4) DC(J5) chainF ( 26) PRO45 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TRP63 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) LYS245 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (307) TYR329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (319) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 9 (322) ARG344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (469) SER491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (472) TYR494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 (473) THR495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (476) ASN498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (584) ARG606 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 (618) ASP640 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (648) ARG670 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (665) SER687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (667) GLN689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (668) LEU690 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 (670) LYS692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (705) SER727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (712) LEU734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (713) PRO735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 prot.sequence rqlvsngfevnlpdqvevivrdlpdPskvkeertrlmgywfvhWfdgklfhlrikaggpnvdgehrairtaehpwllrarlddaleealpkyaavkkrpftflaqkdelidaaataaglshrllnsfkviprfalspkiyepvdgttrvgvfvtigmrydieaslrdlleagidlrgmyvvrrkrqrgllgrvraisddmvqlfeetdlasvnvndaklegsKenftrclsallghnykkllnalddqeagyrtgprfddavrrmgeflakkpirladninaqvgdrivfsnegqarnvrlapkveYvfdrtgaksaeYawRglsqfgpfdrpsfanrsprilvvypsstqgkvenflsafrdgmgsnysgfskgfvdlmgltkvefvmcpvevssadrngahtkynsaiedklagagevhagivvlfedharlpddrnpyihtksllltlgvptqqvrmptvllepkSlqYTlqNfsiatyaklngtpwtvnhdkaindelvvgmglaelsgsrtekrqrfvgittvfagdgsyllgnvskeceyegysdairesmtgilrelkkrnnwrpgdtvrvvfhahRplkrvdvasivfectreigsdqniqmafvtvshDhpfvlidrsergleaykgstarkgvfappRgaisrvgrltrllavnSpQLiKrantplptpllvslhpdstfkdvdylaeqalkftSlswrstLPaatpvtifyseriaellgrlksipnwssanlniklkwsrwfl >6d9l_A:Ribonuclease_H-like; title=TERNARY RSAGO COMPLEX WITH GUIDE RNA AND TARGET DNA CONTAINING G-A NON-CANONICAL PAIR organism=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) / Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) DNA sequence DT(G-13) DC(G-12) DG(G-11) DT(G-10) DC(G-9) DA(G-8) DC(G-7) DC(G-6) DT(G-5) DG(G-4) DA(G-3) DG(G-2) DC(G-1) DA(G0) DG(G1) DT(G2) DA(G3) DA(G4) DC(G5) chainA ( 26) PRO45 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TRP63 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS245 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (310) TYR329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (321) GLU340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (322) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 2 (325) ARG344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (472) SER491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (475) TYR494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 (476) THR495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (479) ASN498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (522) ARG541 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (587) ARG606 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 (621) ASP640 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (651) ARG670 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (668) SER687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (670) GLN689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (671) LEU690 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 (673) LYS692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (708) SER727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (715) LEU734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (716) PRO735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 prot.sequence rqlvsngfevnlpdqvevivrdlpdPskvkeertrlmgywfvhWfdgklfhlrikaggpnvdgehrairtaehpwllrarlddaleealpkyaavkkrpftflaqkdelidaaataaglshrllnsfkviprfalspkiyepvdgttrvgvfvtigmrydieaslrdlleagidlrgmyvvrrkrqpgergllgrvraisddmvqlfeetdlasvnvndaklegsKenftrclsallghnykkllnalddqeagyrtgprfddavrrmgeflakkpirladninaqvgdrivfsnegqarnvrlapkveYvfdrtgaksaEYawRglsqfgpfdrpsfanrsprilvvypsstqgkvenflsafrdgmgsnysgfskgfvdlmgltkvefvmcpvevssadrngahtkynsaiedklagagevhagivvlfedharlpddrnpyihtksllltlgvptqqvrmptvllepkSlqYTlqNfsiatyaklngtpwtvnhdkaindelvvgmglaelsgsrtekRqrfvgittvfagdgsyllgnvskeceyegysdairesmtgilrelkkrnnwrpgdtvrvvfhahRplkrvdvasivfectreigsdqniqmafvtvshDhpfvlidrsergleaykgstarkgvfappRgaisrvgrltrllavnSpQLiKrantplptpllvslhpdstfkdvdylaeqalkftSlswrstLPaatpvtifyseriaellgrlksipnwssanlniklkwsrwfl >6dbi_A: title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS NICKED DNA INTERMEDIATES organism=ESCHERICHIA COLI, DANIO RERIO DNA sequence DA(E2):DT(F33) DC(E3):DG(F32) DA(E4):DT(F31) DG(E5):DC(F30) DT(E6):DA(F29) DG(E7):DC(F28) DC(E8):DG(F27) DT(E9):DA(F26) DA(E10):DT(F25) DC(E11):DG(F24) DA(E12):DT(F23) DG(E13):DC(F22) DA(E14):DT(F21) DC(E15):DG(F20) DT(E16):DA(F19) DG(E17):DC(F18) DG(E18):DC(F17) DA(E19):DT(F16) DA(E20):DT(F15) DC(E21):DG(F14) DA(E22):DT(F13) DA(E23):DT(F12) DA(E24):DT(F11) DA(E25):DT(F10) DA(E26):DT(F9) DC(E27):DG(F8) DC(E28):DG(F7) DC(E29):DG(F6) DT(E30):DA(F5) DG(E31):DC(F4) DC(E32):DG(F3) DA(E33):DT(F2) DG(E34):DC(F1) chainA (264) GLU671 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (465) ASN872 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) ASN874 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG877 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (574) GLU981 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (578) SER985 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (581) LYS988 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ggrprqhllsltrraqkhrlrdlknqvktfaekeeggdvksvcltlfllalragnehkqadeleammqgrgfglhpavclairvntflscsqyhkmyrtvkatsgrqifqplhtlrnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekhgsgpavpekavrfsftimsisirlegeddgitifqeqkpnsElscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmNgNyaRrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasEgneSgnKlfrrfrkmnarqsktfeledilkhhwlytskylqkfmeahk >6dbj_A: title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS NICKED DNA INTERMEDIATES organism=ESCHERICHIA COLI, DANIO RERIO DNA sequence DG(G1):DC(H15) DT(G2):DA(H14) DC(G3):DG(H13) DT(G4):DA(H12) DG(G5):DC(H11) DT(G6):DA(H10) DA(G7):DT(H9) DG(G8):DC(H8) DC(G9):DG(H7) DA(G10):DT(H6) DC(G11):DG(H5) DT(G12):DA(H4) DG(G13):DC(H3) DT(G14):DA(H2) chainA (394) ASN872 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (396) ASN874 0 0 0 0 0 0 0 0 0 0 0 3 8 7 (399) ARG877 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (503) GLU981 0 0 0 0 0 0 0 0 0 0 0 0 0 17 (507) SER985 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (510) LYS988 0 0 0 0 0 0 0 0 0 0 0 0 6 0 prot.sequence fglhpavclairvntflscsqyhkmyrtvkatsgrqifqplhtlrnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekhgsgpavpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmNgNyaRrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasEgneSgnKlfrrfrkmnarqsktfeledilkhhwlytskylqkfmeahkn >6dbj_D:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS NICKED DNA INTERMEDIATES organism=DANIO RERIO DNA sequence DA(F17):DT(J15) DA(F18):DT(J14) DG(F19):DC(J13) DA(F20):DT(J12) DC(F21):DG(J11) DA(F22):DT(J10) DG(F23):DC(J9) DG(F24):DC(J8) DC(F25):DG(J7) DC(F26):DG(J6) DA(F27):DT(J5) DG(F28):DC(J4) DA(F29):DT(J3) DT(F30):DA(J2) DC(F31):DG(J1) chainD (118) ASN117 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 prot.sequence smslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcNrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq >6dbl_B:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS organism=DANIO RERIO DNA sequence DC(F1):DG(E50) DT(F2):DA(E49) DG(F3):DC(E48) DC(F4):DG(E47) DA(F5):DT(E46) DG(F6):DC(E45) DG(F7):DC(E44) DG(F8):DC(E43) DT(F9):DA(E42) DT(F10):DA(E41) DT(F11):DA(E40) DT(F12):DA(E39) DT(F13):DA(E38) DG(F14):DC(E37) DT(F15):DA(E36) DT(F16):DA(E35) DC(F17):DG(E34) DC(F18):DG(E33) DA(F19):DT(E32) DG(F20):DC(E31) DT(F21):DA(E30) DC(F22):DG(E29) DT(F23):DA(E28) DG(F24):DC(E27) DT(F25):DA(E26) DA(F26):DT(E25) DG(F27):DC(E24) DC(F28):DG(E23) DA(F29):DT(E22) DC(F30):DG(E21) DT(F31):DA(E20) DG(F32):DC(E19) DT(F33):DA(E18) DG(F34):DC(E17) DT(F35):DA(E16) DA(F36):DT(E15) DA(F37):DT(E14) DG(F38):DC(E13) DA(F39):DT(E12) DC(F40):DG(E11) DA(F41):DT(E10) DG(F42):DC(E9) DG(F43):DC(E8) DC(F44):DG(E7) DC(F45):DG(E6) DA(F46):DT(E5) DG(F47):DC(E4) DA(F48):DT(E3) DT(F49):DA(E2) DC(F50):DG(E1) chainB (117) ASN117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 prot.sequence mslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcNrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq >6dbo_CD:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS organism=? DNA sequence DG(H3):DC(G32) DA(H4):DT(G31) DG(H5):DC(G30) DT(H6):DA(G29) DA(H7):DT(G28) DC(H8):DG(G27) DT(H9):DA(G26) DA(H10):DT(G25) DC(H11):DG(G24) DC(H12):DG(G23) DA(H13):DT(G22) DC(H14):DG(G21) DT(H15):DA(G20) DG(H16):DC(G19) DT(H17):DA(G18) DG(H18):DC(G17) DT(H19):DA(G16) DA(H20):DT(G15) DA(H21):DT(G14) DG(H22):DC(G13) DA(H23):DT(G12) DC(H24):DG(G11) DA(H25):DT(G10) DG(H26):DC(G9) DG(H27):DC(G8) DC(H28):DG(G7) DC(H29):DG(G6) DA(H30):DT(G5) DG(H31):DC(G4) DA(H32):DT(G3) DT(H33):DA(G2) DC(H34):DG(G1) chainC (379) LYS866 0 0 0 0 0 0 0 0 0 0 0 0 22 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) PRO867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) MET869 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) ARG870 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ASN872 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (117) ASN117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 prot.sequence glhpavclairvntflscsqyhkmyrtvkatsgrqifqplhtlrnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsvpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklKPvMRmNgnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnarqsktfeledilkhhwlytskylqkfmeahk/mslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcNrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq >6dbo_D:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS organism=DANIO RERIO DNA sequence DG(H3):DC(G32) DA(H4):DT(G31) DG(H5):DC(G30) DT(H6):DA(G29) DA(H7):DT(G28) DC(H8):DG(G27) DT(H9):DA(G26) DA(H10):DT(G25) DC(H11):DG(G24) DC(H12):DG(G23) DA(H13):DT(G22) DC(H14):DG(G21) DT(H15):DA(G20) DG(H16):DC(G19) DT(H17):DA(G18) DG(H18):DC(G17) DT(H19):DA(G16) DA(H20):DT(G15) DA(H21):DT(G14) DG(H22):DC(G13) DA(H23):DT(G12) DC(H24):DG(G11) DA(H25):DT(G10) DG(H26):DC(G9) DG(H27):DC(G8) DC(H28):DG(G7) DC(H29):DG(G6) DA(H30):DT(G5) DG(H31):DC(G4) DA(H32):DT(G3) DT(H33):DA(G2) DC(H34):DG(G1) chainD (117) ASN117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 prot.sequence mslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcNrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq >6dbq_A: title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS organism=ESCHERICHIA COLI, DANIO RERIO DNA sequence DC(H1):DG(G61) DT(H2):DA(G60) DG(H3):DC(G59) DC(H4):DG(G58) DA(H5):DT(G57) DG(H7):DC(G55) DG(H8):DC(G54) DT(H9):DA(G53) DT(H10):DA(G52) DT(H11):DA(G51) DT(H12):DA(G50) DT(H13):DA(G49) DG(H14):DC(G48) DT(H15):DA(G47) DA(H16):DT(G46) DC(H17):DG(G45) DA(H18):DT(G44) DG(H19):DC(G43) DC(H20):DG(G42) DC(H21):DG(G41) DA(H22):DT(G40) DG(H23):DC(G39) DA(H24):DT(G38) DC(H25):DG(G37) DA(H26):DT(G36) DG(H27):DC(G35) DT(H28):DA(G34) DG(H29):DC(G33) DG(H30):DC(G32) DA(H31):DT(G31) DG(H32):DC(G30) DT(H33):DA(G29) DA(H34):DT(G28) DC(H35):DG(G27) DT(H36):DA(G26) DA(H37):DT(G25) DC(H38):DG(G24) DC(H39):DG(G23) DA(H40):DT(G22) DC(H41):DG(G21) DT(H42):DA(G20) DG(H43):DC(G19) DT(H44):DA(G18) DG(H45):DC(G17) DT(H46):DA(G16) DA(H47):DT(G15) DA(H48):DT(G14) DG(H49):DC(G13) DA(H50):DT(G12) DC(H51):DG(G11) DA(H52):DT(G10) DG(H53):DC(G9) DG(H54):DC(G8) DC(H55):DG(G7) DC(H56):DG(G6) DA(H57):DT(G5) DG(H58):DC(G4) DA(H59):DT(G3) DT(H60):DA(G2) DC(H61):DG(G1) chainA ( 3) ARG410 0 0 0 0 0 0 0 5 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ARG421 0 0 0 0 0 0 0 0 0 0 0 5 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS425 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) HIS501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) HIS520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) HIS629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (592) ARG999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (593) GLN1000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ggRprqhllsltrRaqKHrlrdlknqvktfaekeeggdvksvcltlfllalragnehkqadeleammqgrgfglhpavclairvntflscsqyHkmyrtvkatsgrqifqplHtlRnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekHgsgpavpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnaRQsktfeledilkhhwlytskylqkfmeah >6dbr_ACD:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH ONE MELTED RSS AND ONE UNMELTED RSS organism=ESCHERICHIA COLI, DANIO RERIO DNA sequence DG(G1):DC(H34) DA(G2):DT(H33) DT(G3):DA(H32) DC(G4):DG(H31) DT(G5):DA(H30) DG(G6):DC(H29) DG(G7):DC(H28) DC(G8):DG(H27) DC(G9):DG(H26) DT(G10):DA(H25) DG(G11):DC(H24) DT(G12):DA(H23) DC(G13):DG(H22) DT(G14):DA(H21) DA(G16):DT(H19) DC(G17):DG(H18) DA(G18):DT(H17) DC(G19):DG(H16) DA(G20):DT(H15) DG(G21):DC(H14) DT(G22):DA(H13) DG(G23):DC(H12) DG(G24):DC(H11) DT(G25):DA(H10) DA(G26):DT(H9) DG(G27):DC(H8) DT(G28):DA(H7) DA(G29):DT(H6) DC(G30):DG(H5) DT(G31):DA(H4) DC(G32):DG(H3) DC(G33):DG(H2) DA(G34):DT(H1) chainA ( 23) HIS501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 42) HIS520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 45) ARG523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (521) ARG999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (522) GLN1000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (380) PRO867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) MET869 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) ARG870 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ASN872 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (117) ASN117 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fglhpavclairvntflscsqyHkmyrtvkatsgrqifqplHtlRnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekhgsgpavpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnaRQsktfeledilkhhwlytskylqkfmeah/glhpavclairvntflscsqyhkmyrtvkatsgrqifqplhtlrnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsvpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkPvMRmNgnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnarqsktfeledilkhhwlytskylqkfmeahk/mslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcNrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq >6dbr_C: title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH ONE MELTED RSS AND ONE UNMELTED RSS organism=? DNA sequence DT(H1):DA(G34) DG(H2):DC(G33) DG(H3):DC(G32) DA(H4):DT(G31) DG(H5):DC(G30) DT(H6):DA(G29) DA(H7):DT(G28) DC(H8):DG(G27) DT(H9):DA(G26) DA(H10):DT(G25) DC(H11):DG(G24) DC(H12):DG(G23) DA(H13):DT(G22) DC(H14):DG(G21) DT(H15):DA(G20) DG(H16):DC(G19) DT(H17):DA(G18) DG(H18):DC(G17) DT(H19):DA(G16) DA(H21):DT(G14) DG(H22):DC(G13) DA(H23):DT(G12) DC(H24):DG(G11) DA(H25):DT(G10) DG(H26):DC(G9) DG(H27):DC(G8) DC(H28):DG(G7) DC(H29):DG(G6) DA(H30):DT(G5) DG(H31):DC(G4) DA(H32):DT(G3) DT(H33):DA(G2) DC(H34):DG(G1) chainC (380) PRO867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) MET869 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) ARG870 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ASN872 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence glhpavclairvntflscsqyhkmyrtvkatsgrqifqplhtlrnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsvpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkPvMRmNgnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnarqsktfeledilkhhwlytskylqkfmeahk >6dbt_A: title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS organism=ESCHERICHIA COLI, DANIO RERIO DNA sequence DG(G1):DC(H61) DA(G2):DT(H60) DT(G3):DA(H59) DC(G4):DG(H58) DT(G5):DA(H57) DG(G6):DC(H56) DG(G7):DC(H55) DC(G8):DG(H54) DC(G9):DG(H53) DT(G10):DA(H52) DG(G11):DC(H51) DT(G12):DA(H50) DC(G13):DG(H49) DT(G14):DA(H48) DT(G15):DA(H47) DA(G16):DT(H46) DC(G17):DG(H45) DA(G18):DT(H44) DC(G19):DG(H43) DA(G20):DT(H42) DG(G21):DC(H41) DT(G22):DA(H40) DG(G23):DC(H39) DG(G24):DC(H38) DT(G25):DA(H37) DA(G26):DT(H36) DG(G27):DC(H35) DT(G28):DA(H34) DA(G29):DT(H33) DC(G30):DG(H32) DT(G31):DA(H31) DC(G32):DG(H30) DC(G33):DG(H29) DA(G34):DT(H28) DT(G36):DA(H26) DG(G37):DC(H25) DT(G38):DA(H24) DC(G39):DG(H23) DT(G40):DA(H22) DG(G41):DC(H21) DG(G42):DC(H20) DC(G43):DG(H19) DT(G44):DC(H17) DT(G46):DA(H16) DA(G47):DT(H15) DC(G48):DG(H14) DA(G49):DT(H13) DA(G50):DT(H12) DA(G51):DT(H11) DA(G52):DT(H10) DA(G53):DT(H9) DC(G54):DG(H8) DC(G55):DG(H7) DT(G57):DA(H5) DG(G58):DC(H4) DC(G59):DG(H3) DA(G60):DT(H2) DG(G61):DC(H1) chainA ( 3) ARG410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 15 0 0 0 0 0 0 0 0 ( 14) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 16 10 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (113) HIS520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (586) GLN1000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ggRprqhllsltrRaqKHrlrdlknqvktfaekeeggdvksvcltlfllalragnehkqadeleammqgrgfglhpavclairvntflscsqyhkmyrtvkatsgrqifqplHtlRnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnarQsktfeledilkhhwlytskylqkfmeah >6dbt_AD:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS organism=DANIO RERIO / ESCHERICHIA COLI, DANIO RERIO DNA sequence DG(G1):DC(H61) DA(G2):DT(H60) DT(G3):DA(H59) DC(G4):DG(H58) DT(G5):DA(H57) DG(G6):DC(H56) DG(G7):DC(H55) DC(G8):DG(H54) DC(G9):DG(H53) DT(G10):DA(H52) DG(G11):DC(H51) DT(G12):DA(H50) DC(G13):DG(H49) DT(G14):DA(H48) DT(G15):DA(H47) DA(G16):DT(H46) DC(G17):DG(H45) DA(G18):DT(H44) DC(G19):DG(H43) DA(G20):DT(H42) DG(G21):DC(H41) DT(G22):DA(H40) DG(G23):DC(H39) DG(G24):DC(H38) DT(G25):DA(H37) DA(G26):DT(H36) DG(G27):DC(H35) DT(G28):DA(H34) DA(G29):DT(H33) DC(G30):DG(H32) DT(G31):DA(H31) DC(G32):DG(H30) DC(G33):DG(H29) DA(G34):DT(H28) DT(G36):DA(H26) DG(G37):DC(H25) DT(G38):DA(H24) DC(G39):DG(H23) DT(G40):DA(H22) DG(G41):DC(H21) DG(G42):DC(H20) DC(G43):DG(H19) DT(G44):DC(H17) DT(G46):DA(H16) DA(G47):DT(H15) DC(G48):DG(H14) DA(G49):DT(H13) DA(G50):DT(H12) DA(G51):DT(H11) DA(G52):DT(H10) DA(G53):DT(H9) DC(G54):DG(H8) DC(G55):DG(H7) DT(G57):DA(H5) DG(G58):DC(H4) DC(G59):DG(H3) DA(G60):DT(H2) DG(G61):DC(H1) chainA ( 3) ARG410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 15 0 0 0 0 0 0 0 0 ( 14) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 16 10 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (113) HIS520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (586) GLN1000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence ggRprqhllsltrRaqKHrlrdlknqvktfaekeeggdvksvcltlfllalragnehkqadeleammqgrgfglhpavclairvntflscsqyhkmyrtvkatsgrqifqplHtlRnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnarQsktfeledilkhhwlytskylqkfmeah/msLqpltavncgsLvqPGfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdSrgCnrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq >6dbt_BC:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS organism=ESCHERICHIA COLI, DANIO RERIO DNA sequence DG(E1):DC(F50) DA(E2):DT(F49) DT(E3):DA(F48) DC(E4):DG(F47) DT(E5):DA(F46) DG(E6):DC(F45) DG(E7):DC(F44) DC(E8):DG(F43) DC(E9):DG(F42) DT(E10):DA(F41) DG(E11):DC(F40) DT(E12):DA(F39) DC(E13):DG(F38) DT(E14):DA(F37) DT(E15):DA(F36) DA(E16):DT(F35) DC(E17):DG(F34) DA(E18):DT(F33) DC(E19):DG(F32) DA(E20):DT(F31) DG(E21):DC(F30) DT(E22):DA(F29) DG(E23):DC(F28) DC(E24):DG(F27) DT(E25):DA(F26) DA(E26):DT(F25) DC(E27):DG(F24) DA(E28):DT(F23) DG(E29):DC(F22) DA(E30):DT(F21) DC(E31):DG(F20) DG(E33):DC(F18) DG(E34):DC(F17) DA(E35):DT(F16) DA(E36):DT(F15) DC(E37):DG(F14) DA(E38):DT(F13) DA(E39):DT(F12) DA(E40):DT(F11) DA(E41):DT(F10) DA(E42):DT(F9) DC(E43):DG(F8) DC(E44):DG(F7) DC(E45):DG(F6) DT(E46):DA(F5) DG(E47):DC(F4) DC(E48):DG(F3) DA(E49):DT(F2) DG(E50):DC(F1) chainB chainC ( 3) ARG410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 14 6 0 0 0 0 0 0 0 0 ( 14) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 17 14 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcnrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq/ggRprqhllsltrRaqkhrlrdlknqvktfaekeeggdvksvcltlfllalragnehkqadeleammqgrgfglhpavclairvntflscsqyhkmyrtvkatsgrqifqplhtlRnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnarqsktfeledilkhhwlytskylqkfmeah >6dbu_AD:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS organism=DANIO RERIO / ESCHERICHIA COLI, DANIO RERIO DNA sequence DG(E1):DC(F34) DA(E2):DT(F33) DT(E3):DA(F32) DC(E4):DG(F31) DT(E5):DA(F30) DG(E6):DC(F29) DG(E7):DC(F28) DC(E8):DG(F27) DC(E9):DG(F26) DT(E10):DA(F25) DG(E11):DC(F24) DT(E12):DA(F23) DC(E13):DG(F22) DT(E14):DA(F21) DT(E15):DA(F20) DA(E16):DT(F19) DC(E17):DG(F18) DA(E18):DT(F17) DC(E19):DG(F16) DA(E20):DT(F15) DG(E21):DC(F14) DT(E22):DA(F13) DG(E23):DC(F12) DC(E24):DG(F11) DT(E25):DA(F10) DA(E26):DT(F9) DC(E27):DG(F8) DA(E28):DT(F7) DG(E29):DC(F6) DA(E30):DT(F5) DC(E31):DG(F4) DT(E32):DA(F3) DG(E33):DC(F2) DG(E34):DC(F1) chainA ( 23) HIS501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 42) HIS520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 ( 45) ARG523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (515) GLN1000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (117) ASN117 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fglhpavclairvntflscsqyHkmyrtvkatsgrqifqplHtlRnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnarQsktfeledilkhhwlytskylqkfmeah/mslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcNrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq >6dbu_B:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS organism=DANIO RERIO DNA sequence DG(G1):DC(H34) DA(G2):DT(H33) DT(G3):DA(H32) DC(G4):DG(H31) DT(G5):DA(H30) DG(G6):DC(H29) DG(G7):DC(H28) DC(G8):DG(H27) DC(G9):DG(H26) DT(G10):DA(H25) DG(G11):DC(H24) DT(G12):DA(H23) DC(G13):DG(H22) DT(G14):DA(H21) DT(G15):DA(H20) DA(G16):DT(H19) DC(G17):DG(H18) DA(G18):DT(H17) DC(G19):DG(H16) DA(G20):DT(H15) DG(G21):DC(H14) DT(G22):DA(H13) DG(G23):DC(H12) DC(G24):DG(H11) DT(G25):DA(H10) DA(G26):DT(H9) DC(G27):DG(H8) DA(G28):DT(H7) DG(G29):DC(H6) DA(G30):DT(H5) DC(G31):DG(H4) DT(G32):DA(H3) DG(G33):DC(H2) DG(G34):DC(H1) chainB (117) ASN117 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcNrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq >6dbv_AD:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS organism=? DNA sequence DC(H1):DG(G61) DT(H2):DA(G60) DG(H3):DC(G59) DC(H4):DG(G58) DA(H5):DT(G57) DG(H6):DC(G56) DG(H7):DC(G55) DG(H8):DC(G54) DT(H9):DA(G53) DT(H10):DA(G52) DT(H11):DA(G51) DT(H12):DA(G50) DT(H13):DA(G49) DG(H14):DC(G48) DT(H15):DA(G47) DA(H16):DT(G46) DC(H17):DG(G45) DA(H18):DT(G44) DG(H19):DC(G43) DC(H20):DG(G42) DC(H21):DG(G41) DA(H22):DT(G40) DG(H23):DC(G39) DA(H24):DT(G38) DC(H25):DG(G37) DA(H26):DT(G36) DG(H27):DC(G35) DT(H28):DA(G34) DG(H29):DC(G33) DG(H30):DC(G32) DA(H31):DT(G31) DG(H32):DC(G30) DT(H33):DA(G29) DA(H34):DT(G28) DC(H35):DG(G27) DT(H36):DA(G26) DA(H37):DT(G25) DC(H38):DG(G24) DC(H39):DG(G23) DA(H40):DT(G22) DC(H41):DG(G21) DT(H42):DA(G20) DG(H43):DC(G19) DT(H44):DA(G18) DG(H45):DC(G17) DT(H46):DA(G16) DA(H47):DT(G15) DA(H48):DT(G14) DG(H49):DC(G13) DA(H50):DT(G12) DC(H51):DG(G11) DA(H52):DT(G10) DG(H53):DC(G9) DG(H54):DC(G8) DC(H55):DG(G7) DC(H56):DG(G6) DA(H57):DT(G5) DG(H58):DC(G4) DA(H59):DT(G3) DT(H60):DA(G2) DC(H61):DG(G1) chainA ( 3) ARG410 0 0 0 0 0 0 0 0 5 14 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 16 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS425 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) HIS501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) HIS520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (587) GLN1000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (588) SER1001 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (117) ASN117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence ggRprqhllsltrRaqkHrlrdlknqvktfaekeeggdvksvcltlfllalragnehrqadeleammqgrgfglhpavclairvntflscsqyHkmyrtvkatsgrqifqplHtlRnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekvpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnarQSktfeledilkhhwlytskylqkfmeahk/mslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcNrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq >6dbv_BC:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS organism=DANIO RERIO / ESCHERICHIA COLI, DANIO RERIO DNA sequence DG(E1):DC(F50) DT(E3):DT(F49) DC(E4):DG(F47) DT(E5):DA(F46) DG(E6):DC(F45) DG(E7):DC(F44) DC(E8):DG(F43) DC(E9):DG(F42) DT(E10):DA(F41) DG(E11):DC(F40) DT(E12):DA(F39) DC(E13):DG(F38) DT(E14):DA(F37) DT(E15):DA(F36) DA(E16):DT(F35) DC(E17):DG(F34) DA(E18):DT(F33) DC(E19):DG(F32) DA(E20):DT(F31) DG(E21):DC(F30) DT(E22):DA(F29) DG(E23):DC(F28) DC(E24):DG(F27) DT(E25):DA(F26) DA(E26):DT(F25) DC(E27):DG(F24) DA(E28):DT(F23) DG(E29):DC(F22) DA(E30):DT(F21) DC(E31):DG(F20) DT(E32):DA(F19) DG(E33):DC(F18) DG(E34):DC(F17) DA(E35):DT(F16) DA(E36):DT(F15) DC(E37):DG(F14) DA(E38):DT(F13) DA(E39):DT(F12) DA(E40):DT(F11) DA(E41):DT(F10) DA(E42):DT(F9) DC(E43):DG(F8) DC(E44):DG(F7) DC(E45):DG(F6) DT(E46):DA(F5) DG(E47):DC(F4) DC(E48):DG(F3) DG(E50):DC(F1) chainB (117) ASN117 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 3) ARG410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 18 2 0 0 0 0 0 0 0 ( 14) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 7 0 0 0 0 0 0 0 0 0 0 0 ( 15) ALA422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (222) HIS629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (592) ARG999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (593) GLN1000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcNrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq/ggRprqhllsltrRAqkHrlrdlknqvktfaekeeggdvksvcltlfllalragnehkqadeleammqgrgfglhpavclairvntflscsqyhkmyrtvkatsgrqifqplhtlrnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekHgsgpavpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnaRQsktfeledilkhhwlytskylqkfmeah >6dbv_C: title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS organism=ESCHERICHIA COLI, DANIO RERIO DNA sequence DC(F1):DG(E50) DG(F3):DC(E48) DC(F4):DG(E47) DA(F5):DT(E46) DG(F6):DC(E45) DG(F7):DC(E44) DG(F8):DC(E43) DT(F9):DA(E42) DT(F10):DA(E41) DT(F11):DA(E40) DT(F12):DA(E39) DT(F13):DA(E38) DG(F14):DC(E37) DT(F15):DA(E36) DT(F16):DA(E35) DC(F17):DG(E34) DC(F18):DG(E33) DA(F19):DT(E32) DG(F20):DC(E31) DT(F21):DA(E30) DC(F22):DG(E29) DT(F23):DA(E28) DG(F24):DC(E27) DT(F25):DA(E26) DA(F26):DT(E25) DG(F27):DC(E24) DC(F28):DG(E23) DA(F29):DT(E22) DC(F30):DG(E21) DT(F31):DA(E20) DG(F32):DC(E19) DT(F33):DA(E18) DG(F34):DC(E17) DT(F35):DA(E16) DA(F36):DT(E15) DA(F37):DT(E14) DG(F38):DC(E13) DA(F39):DT(E12) DC(F40):DG(E11) DA(F41):DT(E10) DG(F42):DC(E9) DG(F43):DC(E8) DC(F44):DG(E7) DC(F45):DG(E6) DA(F46):DT(E5) DG(F47):DC(E4) DT(F49):DT(E3) DC(F50):DG(E1) chainC ( 3) ARG410 0 0 0 0 0 0 0 2 18 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ARG421 0 0 0 0 0 0 0 0 0 0 0 7 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ALA422 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS425 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) HIS629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (592) ARG999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (593) GLN1000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ggRprqhllsltrRAqkHrlrdlknqvktfaekeeggdvksvcltlfllalragnehkqadeleammqgrgfglhpavclairvntflscsqyhkmyrtvkatsgrqifqplhtlrnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekHgsgpavpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnaRQsktfeledilkhhwlytskylqkfmeah >6dbw_ABC:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS SUBSTRATE DNA organism=DANIO RERIO / ESCHERICHIA COLI, DANIO RERIO DNA sequence DG(E1):DC(F50) DA(E2):DT(F49) DT(E3):DA(F48) DC(E4):DG(F47) DT(E5):DA(F46) DG(E6):DC(F45) DG(E7):DC(F44) DC(E8):DG(F43) DC(E9):DG(F42) DT(E10):DA(F41) DG(E11):DC(F40) DT(E12):DA(F39) DC(E13):DG(F38) DT(E14):DA(F37) DT(E15):DA(F36) DA(E16):DT(F35) DC(E17):DG(F34) DA(E18):DT(F33) DC(E19):DG(F32) DA(E20):DT(F31) DG(E21):DC(F30) DT(E22):DA(F29) DG(E23):DC(F28) DC(E24):DG(F27) DT(E25):DA(F26) DA(E26):DT(F25) DC(E27):DG(F24) DA(E28):DT(F23) DG(E29):DC(F22) DA(E30):DT(F21) DC(E31):DG(F20) DT(E32):DA(F19) DG(E33):DC(F18) DG(E34):DC(F17) DA(E35):DT(F16) DA(E36):DT(F15) DC(E37):DG(F14) DA(E38):DT(F13) DA(E39):DT(F12) DA(E40):DT(F11) DA(E41):DT(F10) DA(E42):DT(F9) DC(E43):DG(F8) DC(E44):DG(F7) DC(E45):DG(F6) DT(E46):DA(F5) DG(E47):DC(F4) DC(E48):DG(F3) DA(E49):DT(F2) DG(E50):DC(F1) chainA ( 55) ASN462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (454) MET869 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (455) ARG870 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) ASN872 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (117) ASN117 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 3) ARG410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 25 0 0 0 0 0 0 0 0 0 ( 14) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 19 20 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ALA422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 94) HIS501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (584) ARG999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ggrprqhllsltrraqkhrlrdlknqvktfaekeeggdvksvcltlfllalragNehkqadeleammqgrgfglhpavclairvntflscsqyhkmyrtvkatsgrqifqplhtlrnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsvpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvMRmNgnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnarqsktfeledilkhhwlytskylqkfmeahk/mslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcNrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq/ggRprqhllsltrRAqkHrlrdlknqvktfaekeeggdvksvcltlfllalragnehkqadeleammqgrgfglhpavclairvntflscsqyHkmyrtvkatsgrqifqplhtlRnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsepekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnaRqsktfeledilkhhwlytskylqkfmeahkn >6dbw_B:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS SUBSTRATE DNA organism=? DNA sequence DC(F1):DG(E50) DT(F2):DA(E49) DG(F3):DC(E48) DC(F4):DG(E47) DA(F5):DT(E46) DG(F6):DC(E45) DG(F7):DC(E44) DG(F8):DC(E43) DT(F9):DA(E42) DT(F10):DA(E41) DT(F11):DA(E40) DT(F12):DA(E39) DT(F13):DA(E38) DG(F14):DC(E37) DT(F15):DA(E36) DT(F16):DA(E35) DC(F17):DG(E34) DC(F18):DG(E33) DA(F19):DT(E32) DG(F20):DC(E31) DT(F21):DA(E30) DC(F22):DG(E29) DT(F23):DA(E28) DG(F24):DC(E27) DT(F25):DA(E26) DA(F26):DT(E25) DG(F27):DC(E24) DC(F28):DG(E23) DA(F29):DT(E22) DC(F30):DG(E21) DT(F31):DA(E20) DG(F32):DC(E19) DT(F33):DA(E18) DG(F34):DC(E17) DT(F35):DA(E16) DA(F36):DT(E15) DA(F37):DT(E14) DG(F38):DC(E13) DA(F39):DT(E12) DC(F40):DG(E11) DA(F41):DT(E10) DG(F42):DC(E9) DG(F43):DC(E8) DC(F44):DG(E7) DC(F45):DG(E6) DA(F46):DT(E5) DG(F47):DC(E4) DA(F48):DT(E3) DT(F49):DA(E2) DC(F50):DG(E1) chainB (117) ASN117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 prot.sequence mslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcNrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq >6dbx_A: title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS SUBSTRATE DNA organism=ESCHERICHIA COLI, DANIO RERIO DNA sequence DG(E1):DC(F50) DA(E2):DT(F49) DT(E3):DA(F48) DC(E4):DG(F47) DT(E5):DA(F46) DG(E6):DC(F45) DG(E7):DC(F44) DC(E8):DG(F43) DC(E9):DG(F42) DT(E10):DA(F41) DG(E11):DC(F40) DT(E12):DA(F39) DC(E13):DG(F38) DT(E14):DA(F37) DT(E15):DA(F36) DA(E16):DT(F35) DC(E17):DG(F34) DA(E18):DT(F33) DC(E19):DG(F32) DA(E20):DT(F31) DG(E21):DC(F30) DT(E22):DA(F29) DG(E23):DC(F28) DC(E24):DG(F27) DT(E25):DA(F26) DA(E26):DT(F25) DC(E27):DG(F24) DA(E28):DT(F23) DG(E29):DC(F22) DA(E30):DT(F21) DC(E31):DG(F20) DT(E32):DA(F19) DG(E33):DC(F18) DG(E34):DC(F17) DA(E35):DT(F16) DA(E36):DT(F15) DC(E37):DG(F14) DA(E38):DT(F13) DA(E39):DT(F12) DA(E40):DT(F11) DA(E41):DT(F10) DC(E43):DG(F8) DC(E44):DG(F7) DC(E45):DG(F6) DT(E46):DA(F5) DG(E47):DC(F4) DC(E48):DG(F3) DA(E49):DT(F2) DG(E50):DC(F1) chainA ( 55) ASN462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) MET869 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) ARG870 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ggrprqhllsltrraqkhrlrdlknqvktfaekeeggdvksvcltlfllalragNehkqadeleammqgrgfglhpavclairvntflscsqyhkmyrtvkatsgrqifqplhtlrnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekhpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvMRmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnarqsktfeledilkhhwlytskylqkfmeah >6dbx_ABC:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS SUBSTRATE DNA organism=ESCHERICHIA COLI, DANIO RERIO DNA sequence DC(F1):DG(E50) DT(F2):DA(E49) DG(F3):DC(E48) DC(F4):DG(E47) DA(F5):DT(E46) DG(F6):DC(E45) DG(F7):DC(E44) DG(F8):DC(E43) DT(F10):DA(E41) DT(F11):DA(E40) DT(F12):DA(E39) DT(F13):DA(E38) DG(F14):DC(E37) DT(F15):DA(E36) DT(F16):DA(E35) DC(F17):DG(E34) DC(F18):DG(E33) DA(F19):DT(E32) DG(F20):DC(E31) DT(F21):DA(E30) DC(F22):DG(E29) DT(F23):DA(E28) DG(F24):DC(E27) DT(F25):DA(E26) DA(F26):DT(E25) DG(F27):DC(E24) DC(F28):DG(E23) DA(F29):DT(E22) DC(F30):DG(E21) DT(F31):DA(E20) DG(F32):DC(E19) DT(F33):DA(E18) DG(F34):DC(E17) DT(F35):DA(E16) DA(F36):DT(E15) DA(F37):DT(E14) DG(F38):DC(E13) DA(F39):DT(E12) DC(F40):DG(E11) DA(F41):DT(E10) DG(F42):DC(E9) DG(F43):DC(E8) DC(F44):DG(E7) DC(F45):DG(E6) DA(F46):DT(E5) DG(F47):DC(E4) DA(F48):DT(E3) DT(F49):DA(E2) DC(F50):DG(E1) chainA ( 55) ASN462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) MET869 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) ARG870 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 3) ARG410 0 0 0 0 0 0 0 0 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ARG421 0 0 0 0 0 0 0 0 0 0 0 1 16 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS425 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) HIS501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (584) ARG999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ggrprqhllsltrraqkhrlrdlknqvktfaekeeggdvksvcltlfllalragNehkqadeleammqgrgfglhpavclairvntflscsqyhkmyrtvkatsgrqifqplhtlrnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekhpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvMRmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnarqsktfeledilkhhwlytskylqkfmeah/mslqpltavncgslvqpgfslldlegdvylfgqkgwpkrscptgifgvrikkgeLklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdsrgcnrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq/ggRprqhllsltrRaqkHrlrdlknqvktfaekeeggdvksvcltlfllalragnehkqadeleammqgrgfglhpavclairvntflscsqyHkmyrtvkatsgrqifqplhtlRnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsepekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnaRqsktfeledilkhhwlytskylqkfmeahkn >6df5_A:beta-beta-alpha_zinc_fingers; title=KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH THE SPECIFIC KAISO BINDING SEQUENCE (KBS) organism=Homo sapiens DNA sequence DT(D1):DA(E36) DG(D2):DC(E35) DC(D3):DG(E34) DT(D4):DA(E33) DT(D5):DA(E32) DC(D6):DG(E31) DC(D7):DG(E30) DT(D8):DA(E29) DG(D9):DC(E28) DC(D10):DG(E27) DC(D11):DG(E26) DA(D12):DT(E25) DA(D13):DT(E24) DT(D14):DA(E23) DA(D15):DT(E22) DA(D16):DT(E21) DC(D17):DG(E20) DG(D18):DC(E19) chainA ( 26) THR507 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 27) SER508 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 30) ARG511 0 0 0 0 0 0 0 13 12 6 2 0 0 0 0 0 0 0 ( 52) LEU533 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 54) GLU535 0 0 0 0 0 0 1 2 3 4 0 0 0 0 0 0 0 0 ( 55) TYR536 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 ( 80) ASN561 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) TYR562 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 ( 82) GLN563 0 0 0 1 10 6 5 0 0 0 0 0 0 0 0 0 0 0 (114) ARG595 0 0 0 0 0 0 0 0 0 6 12 7 1 0 0 0 0 0 prot.sequence dhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfpLaEYrtKheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqY >6df8_A:beta-beta-alpha_zinc_fingers; title=KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH THE SPECIFIC KAISO BINDING SEQUENCE (KBS), PH 6.5 organism=Homo sapiens DNA sequence DT(D1):DA(E36) DG(D2):DC(E35) DC(D3):DG(E34) DT(D4):DA(E33) DT(D5):DA(E32) DC(D6):DG(E31) DC(D7):DG(E30) DT(D8):DA(E29) DG(D9):DC(E28) DC(D10):DG(E27) DC(D11):DG(E26) DA(D12):DT(E25) DA(D13):DT(E24) DT(D14):DA(E23) DA(D15):DT(E22) DA(D16):DT(E21) DC(D17):DG(E20) DG(D18):DC(E19) chainA ( 26) THR507 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 ( 27) SER508 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 30) ARG511 0 0 0 0 0 0 0 12 11 6 3 0 0 0 0 0 0 0 ( 52) LEU533 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 54) GLU535 0 0 0 0 0 0 3 9 6 4 0 0 0 0 0 0 0 0 ( 55) TYR536 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 ( 80) ASN561 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) TYR562 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 ( 82) GLN563 0 0 0 1 9 6 5 0 0 0 0 0 0 0 0 0 0 0 (114) ARG595 0 0 0 0 0 0 0 0 0 2 10 8 0 0 0 0 0 0 (116) TYR597 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 prot.sequence dhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfpLaEYrtkheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqYay >6df9_A:beta-beta-alpha_zinc_fingers; title=KAISO (ZBTB33) E535Q ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH THE SPECIFIC KAISO BINDING SEQUENCE (KBS) organism=Homo sapiens DNA sequence DC(E19):DG(D18) DG(E20):DC(D17) DT(E21):DA(D16) DT(E22):DA(D15) DA(E23):DT(D14) DT(E24):DA(D13) DT(E25):DA(D12) DG(E26):DC(D11) DG(E27):DC(D10) DC(E28):DG(D9) DA(E29):DT(D8) DG(E30):DC(D7) DG(E31):DC(D6) DA(E32):DT(D5) DA(E33):DT(D4) DG(E34):DC(D3) DC(E35):DG(D2) DA(E36):DT(D1) chainA ( 24) CYS505 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 26) THR507 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 27) SER508 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 30) ARG511 0 0 0 0 0 0 0 3 9 10 9 0 0 0 0 0 0 0 ( 52) LEU533 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 54) GLN535 0 0 0 0 0 0 0 0 3 7 11 3 0 0 0 0 0 0 ( 55) TYR536 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 ( 80) ASN561 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 81) TYR562 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 ( 82) GLN563 0 0 0 0 0 0 0 0 0 0 0 6 6 9 0 0 0 0 (114) ARG595 0 0 0 0 0 3 7 12 5 0 0 0 0 0 0 0 0 0 (116) TYR597 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 prot.sequence dhyelivdgrvyyicivckrsyvClTSlrRhfnihswekkypcrycekvfpLaQYrtkheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqY >6dfa_A:beta-beta-alpha_zinc_fingers; title=KAISO (ZBTB33) E535A ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH THE SPECIFIC KAISO BINDING SEQUENCE (KBS) organism=Homo sapiens DNA sequence DC(E19):DG(D18) DG(E20):DC(D17) DT(E21):DA(D16) DT(E22):DA(D15) DA(E23):DT(D14) DT(E24):DA(D13) DT(E25):DA(D12) DG(E26):DC(D11) DG(E27):DC(D10) DC(E28):DG(D9) DA(E29):DT(D8) DG(E30):DC(D7) DG(E31):DC(D6) DA(E32):DT(D5) DA(E33):DT(D4) DG(E34):DC(D3) DC(E35):DG(D2) DA(E36):DT(D1) chainA ( 27) THR507 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 28) SER508 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 31) ARG511 0 0 0 0 0 0 0 2 7 10 15 0 0 0 0 0 0 0 ( 53) LEU533 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 55) ALA535 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 56) TYR536 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 ( 81) ASN561 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 82) TYR562 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 ( 83) GLN563 0 0 0 0 0 0 0 0 0 0 0 5 6 12 1 0 0 0 (115) ARG595 0 0 0 0 0 0 9 11 6 0 0 0 0 0 0 0 0 0 (117) TYR597 0 0 0 0 0 0 1 1 5 0 0 0 0 0 0 0 0 0 prot.sequence ddhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfpLaAYrtkheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqYayl >6dfb_A:beta-beta-alpha_zinc_fingers; title=KAISO (ZBTB33) K539A ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH THE SPECIFIC KAISO BINDING SEQUENCE (KBS) organism=Homo sapiens DNA sequence DC(E19):DG(D18) DG(E20):DC(D17) DT(E21):DA(D16) DT(E22):DA(D15) DA(E23):DT(D14) DT(E24):DA(D13) DT(E25):DA(D12) DG(E26):DC(D11) DG(E27):DC(D10) DC(E28):DG(D9) DA(E29):DT(D8) DG(E30):DC(D7) DG(E31):DC(D6) DA(E32):DT(D5) DA(E33):DT(D4) DG(E34):DC(D3) DC(E35):DG(D2) DA(E36):DT(D1) chainA ( 27) THR507 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 28) SER508 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 31) ARG511 0 0 0 0 0 0 0 3 7 11 13 0 0 0 0 0 0 0 ( 53) LEU533 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 55) GLU535 0 0 0 0 0 0 0 0 1 5 13 4 0 0 0 0 0 0 ( 56) TYR536 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 81) ASN561 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 82) TYR562 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 ( 83) GLN563 0 0 0 0 0 0 0 0 0 0 0 5 7 11 1 0 0 0 (115) ARG595 0 0 0 0 0 1 7 13 6 0 0 0 0 0 0 0 0 0 (117) TYR597 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence ddhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfpLaEYrtaheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqY >6dfc_A:beta-beta-alpha_zinc_fingers; title=KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH THE SPECIFIC KAISO BINDING SEQUENCE (KBS) WITH A T-TO-U SUBSTITUTION organism=Homo sapiens DNA sequence DT(D1):DA(E36) DG(D2):DC(E35) DC(D3):DG(E34) DT(D4):DA(E33) DT(D5):DA(E32) DC(D6):DG(E31) DU(D7):DA(E30) DT(D8):DA(E29) DG(D9):DC(E28) DC(D10):DG(E27) DC(D11):DG(E26) DA(D12):DT(E25) DA(D13):DT(E24) DT(D14):DA(E23) DA(D15):DT(E22) DA(D16):DT(E21) DC(D17):DG(E20) DG(D18):DC(E19) chainA ( 25) CYS505 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 27) THR507 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 28) SER508 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 31) ARG511 0 0 0 0 0 0 0 14 12 6 2 0 0 0 0 0 0 0 ( 53) LEU533 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 55) GLU535 0 0 0 0 0 0 1 2 3 4 0 0 0 0 0 0 0 0 ( 56) TYR536 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 ( 81) ASN561 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) TYR562 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 ( 83) GLN563 0 0 0 1 11 5 4 0 0 0 0 0 0 0 0 0 0 0 (115) ARG595 0 0 0 0 0 0 0 0 0 6 12 7 1 0 0 0 0 0 (117) TYR597 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 prot.sequence ddhyelivdgrvyyicivckrsyvClTSlrRhfnihswekkypcrycekvfpLaEYrtKheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqY >6dfy_C:Homeodomain-like; title=REMODELED CRYSTAL STRUCTURE OF DNA-BOUND DUX4-HD2 organism=HOMO SAPIENS DNA sequence DC(F14):DG(E14) DT(F15):DA(E13) DA(F16):DT(E12) DA(F17):DT(E11) DT(F18):DA(E10) DC(F19):DG(E9) DT(F20):DA(E8) DA(F21):DT(E7) DA(F22):DT(E6) DT(F23):DA(E5) DC(F24):DG(E4) chainC ( 43) ILE51 0 0 0 3 2 0 0 0 0 0 0 ( 46) GLN54 2 5 0 0 0 0 0 0 0 0 0 ( 47) ASN55 0 0 0 1 12 5 0 0 0 0 0 ( 51) ARG59 0 0 0 0 4 10 7 0 0 0 0 prot.sequence rtavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrraRhpg >6dfy_CD:Homeodomain-like; title=REMODELED CRYSTAL STRUCTURE OF DNA-BOUND DUX4-HD2 organism=HOMO SAPIENS DNA sequence DC(F14):DG(E14) DT(F15):DA(E13) DA(F16):DT(E12) DA(F17):DT(E11) DT(F18):DA(E10) DC(F19):DG(E9) DT(F20):DA(E8) DA(F21):DT(E7) DA(F22):DT(E6) DT(F23):DA(E5) DC(F24):DG(E4) chainC ( 43) ILE51 0 0 0 3 2 0 0 0 0 0 0 ( 46) GLN54 2 5 0 0 0 0 0 0 0 0 0 ( 47) ASN55 0 0 0 1 12 5 0 0 0 0 0 ( 51) ARG59 0 0 0 0 4 10 7 0 0 0 0 chainD ( 42) ILE51 0 0 0 0 0 0 0 0 3 2 0 ( 45) GLN54 0 0 0 0 0 1 5 0 0 0 0 ( 46) ASN55 0 0 0 0 0 0 0 0 2 13 6 ( 50) ARG59 0 0 0 0 0 0 0 0 0 4 12 prot.sequence rtavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrraRhpg/tavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrraRhp >6dg0_A:RNA-binding_domain,_RBD; title=MEC-8 C-TERMINAL RRM DOMAIN BOUND TO AGCACA organism=Caenorhabditis elegans DNA sequence DC(D4) DA(D3) DA(D0) DG(D1) DC(D2):DA(D3) chainA ( 4) THR22 0 4 0 0 4 ( 6) PHE24 0 0 0 10 31 ( 8) ALA26 0 0 0 6 0 ( 33) ARG51 8 3 0 0 3 ( 44) PHE62 0 48 0 0 54 ( 68) ASP87 0 0 4 0 0 ( 73) ARG92 0 0 23 13 0 ( 75) GLU94 0 0 0 11 6 ( 77) ALA96 0 1 0 0 3 ( 78) ARG97 0 0 0 0 30 ( 79) ASN98 1 0 0 0 0 ( 81) MET100 1 6 0 0 6 ( 82) ALA101 4 0 0 0 0 prot.sequence aasTlFvAnlsaevnedtlrgvfkafsgftrlRlhnkngsavaFveysdlqkatqamislqgfqtanDrgglRiEyARNkMAdv >6dgd_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=PRIA HELICASE BOUND TO DSDNA OF A DNA REPLICATION FORK organism=KLEBSIELLA PNEUMONIAE DNA sequence DG(Z2):DC(Y12) DT(Z3):DA(Y11) DC(Z4):DG(Y10) DG(Z5):DC(Y9) DG(Z6):DC(Y8) DC(Z7):DG(Y7) DG(Z8):DC(Y6) DT(Z9):DA(Y5) DG(Z10):DC(Y4) DC(Z11):DG(Y3) DT(Z12):DA(Y2) chainB ( 9) VAL10 0 0 0 0 0 0 0 0 0 0 6 ( 10) PRO11 0 0 0 0 0 0 0 0 0 0 7 ( 11) LEU12 0 0 0 0 0 0 0 0 0 0 5 ( 13) ARG14 0 0 0 0 0 0 0 0 0 0 2 ( 35) PHE36 0 0 0 0 0 0 0 0 0 0 8 prot.sequence svahvalpVPLpRtfdyllpegmavkagcrvrvpFgkqerigivaavserselpldelkpvaealddepvfsttvwrllmwaaeyyhhpigdvlfhalpvmlrqgkpasatplwywfateqgqvvdlnglkrsrkqqqalaalrqgkiwrhqvgelefneaalqalrgkglaelaceapaltdwrsaysvaglrlnteqatavgaihsaadrfsawllagitgsgktevylsvlenvlaqgrqalvmvpeigltpqtiarfrqrfnapvevlhsglndserlsawlkakngeaaivigtrsslftpfkdlgvivideehdssykqqegwryhardlavwrahseqipiilgsatpaletlhnvrqgkyrqltlskaqqhvldlkgqplqaglspalisrmrqhlqadnqvilflnrrgfapallchdcgwiaecprcdsyytlhqaqhhlrchhcdsqrpiprqcpscgsthlvpvgigteqleqalaplfpevpisrirggariligtqmlakghhfpdvtlvslldvdgalfsadfrsaerfaqlytqvsgragragkqgevilqthhpehpllqtllykgydafaeqalaerqtmqlppwtshvliraedhnnqqaplflqqlrnllqaspladeklwvlgpvpalapkrggrwrwqillqhpsrvrlqhivsgtlalintlpearkvkwvldvdpie >6dia_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH TEMPLATING CYTOSINE AND INCOMING FAPY-DGTP ANALOG organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 43 0 0 0 0 ( 26) LYS35 9 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6dic_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=D276G DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH TEMPLATING CYTOSINE AND INCOMING FAPY-DGTP ANALOG organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 38 ( 26) LYS35 0 0 0 0 6 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsgifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6dks_C:DNA-binding_protein_LAG-1_CSL;p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF THE RBPJ-SHARP-DNA REPRESSOR COMPLEX organism=MUS MUSCULUS DNA sequence DA(B3):DT(A15) DC(B4):DG(A14) DT(B5):DA(A13) DG(B6):DC(A12) DT(B7):DA(A11) DG(B8):DC(A10) DG(B9):DC(A9) DG(B10):DC(A8) DA(B11):DT(A7) DA(B12):DT(A6) DA(B13):DT(A5) DG(B14):DC(A4) DA(B15):DT(A3) chainC ( 34) TYR86 0 0 0 0 0 0 0 1 10 0 0 0 0 ( 37) GLU89 0 0 0 0 4 1 0 0 0 0 0 0 0 ( 39) ARG91 0 0 0 0 10 12 2 0 0 0 0 0 0 (139) SER191 0 0 0 0 0 0 0 0 2 4 0 0 0 (140) LYS192 0 0 0 0 0 0 0 0 1 0 0 0 0 (165) ARG220 0 0 0 10 6 0 0 0 0 0 0 0 0 prot.sequence ppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskklknadlciasgtkvalfnrlRsqtvstrylhveggnfhassqqwgafyihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpceqnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlngggdvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgviystsltftytpep >6dmn_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: SOAKED IN 2 MM CA2+ AND 200 MM K+ AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 1 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6dmv_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: SOAKED FOR 40 S IN 2 MM MG2+ AND 200 MM K+ AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 0 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6dnw_A: title=SEQUENCE REQUIREMENTS OF THE LISTERIA INNOCUA PROPHAGE ATTP SITE organism=Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) / Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) DNA sequence DT(B2):DA(C26) DT(B3):DA(C25) DT(B4):DA(C24) DA(B5):DT(C23) DG(B6):DC(C22) DT(B7):DA(C21) DT(B8):DA(C20) DC(B9):DG(C19) DC(B10):DG(C18) DT(B11):DA(C17) DC(B12):DG(C16) DG(B13):DC(C15) DT(B14):DA(C14) DT(B15):DA(C13) DT(B16):DA(C12) DT(B17):DA(C11) DC(B18):DG(C10) DT(B19):DA(C9) DC(B20):DG(C8) DT(B21):DA(C7) DC(B22):DG(C6) DG(B23):DC(C5) DT(B24):DA(C4) DT(B25):DA(C3) DG(B26):DC(C2) chainA ( 3) MET136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 ( 7) LYS140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 ( 23) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 4 0 0 0 0 ( 74) TYR207 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 75) ASN208 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 2 2 0 0 0 0 0 0 0 0 (126) ASN259 0 0 0 0 0 0 0 0 0 10 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) LYS262 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ARG284 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) LYS286 0 0 0 14 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ASP287 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR288 0 2 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) SER290 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) TYR295 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) TYR297 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) TYR299 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) LYS306 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence drMvmgKikrieaglplttakgRtfgydvidtklyineeeakqlrliydifeeeqsitflqkrlkklgfkvrtYNrynnwltndlycgyvsykdkvhvkgihepiiseeqfyrvqeifsrmgknpNmnKesasllnnlvvcskcglgfvhRrKDTvSrgkkYhYrYyscktyKhthelekcgnkiwradkleeliidrvnnylefrekqlylkslinkiyidgeqvtiewl >6do8_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 200 MM K+ FOR 80 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 0 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6do9_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 200 MM K+ FOR 120 S AT 21 C organism=? DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 1 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 0 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygrk >6doh_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: SOAK IN 0.5 MM EGTA AND 200 MM K+ AT 21 C organism=? DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 2 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikady >6doi_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID (1.54 ANGSTROM WAVELENGTH): SOAK IN 0.5 MM EGTA AND 200 MM K+ AT 21 C organism=BACILLUS HALODURANS C-125 DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 1 0 0 ( 45) ASN105 0 0 1 5 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 2 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikady >6doj_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 5 MM K+ FOR 120 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6dok_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 25 MM K+ FOR 120 S AT 21 C (DATASET 1) organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6dol_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 25 MM K+ FOR 120 S AT 21 C (DATASET 2) organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6dom_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 50 MM K+ FOR 120 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 0 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygrk >6don_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 100 MM K+ FOR 120 S AT 21 C (DATASET 1) organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 0 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygrk >6doo_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 100 MM K+ FOR 120 S AT 21 C (DATASET 2) organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 1 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 0 0 ( 74) GLN134 0 0 0 0 1 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygrk >6dop_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 200 MM K+ FOR 120 S AT 21 C (DATASET 1) organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6doq_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 200 MM K+ FOR 120 S AT 21 C (DATASET 2) organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 0 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygrk >6dor_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 300 MM K+ FOR 120 S AT 21 C (DATASET 1) organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 6 0 0 ( 46) ASN106 0 0 0 5 0 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygrk >6dos_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 300 MM K+ FOR 120 S AT 21 C (DATASET 2) organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6dot_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 5 MM MG2+ AND 200 MM RB+ FOR 40 S AT 21 C organism=? DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 2 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6doy_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 200 MM LI+ FOR 120 S AT 21 C organism=Bacillus halodurans DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 6 0 0 ( 46) ASN106 0 0 0 5 0 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 2 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6doz_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 1 MM MG2+ AND 75 MM K+ FOR 40 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6dp0_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2.5 MM MG2+ AND 75 MM K+ FOR 40 S AT 21 C organism=? DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 1 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6dp1_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 5 MM MG2+ AND 75 MM K+ FOR 40 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6dp2_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 7.5 MM MG2+ AND 75 MM K+ FOR 40 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 6 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 1 1 ( 75) THR135 0 0 0 0 2 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6dp7_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 500 MM MN2+ AND 200 MM K+ FOR 40 S AT 21 C organism=? DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 0 0 ( 74) GLN134 0 0 0 0 1 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6dp9_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MN2+ AND 200 MM K+ FOR 40 S AT 21 C organism=? DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 2 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadyg >6dpd_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 16 MM MN2+ AND 200 MM K+ FOR 40 S AT 21 C organism=? DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 1 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 0 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 2 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygrk >6dpe_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 20 MM MN2+ AND 200 MM K+ FOR 40 S AT 21 C organism=? DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 5 1 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 3 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygrk >6dpf_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 40 MM MN2+ AND 200 MM K+ FOR 40 S AT 21 C organism=? DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 1 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 1 1 ( 75) THR135 0 0 0 0 2 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygrk >6dpg_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 E188A IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 4 MM MN2+ AND 200 MM K+ FOR 240 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 1 0 0 ( 45) ASN105 0 0 1 6 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgaikadygr >6dph_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 E188A IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MN2+ AND 200 MM K+ FOR 120 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgaikady >6dpi_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 K196A IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 10 MM MG2+ AND 200 MM RB+ FOR 40 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygra >6dpj_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 K196A IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 4 MM MN2+ AND 200 MM K+ FOR 80 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 0 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 3 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadyg >6dpk_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 K196A IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 4 MM MN2+ AND 200 MM K+ FOR 240 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 2 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygr >6dpl_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 K196A IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 10 MM MG2+ AND 200 MM RB+ FOR 720 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 6 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygra >6dpm_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 K196A IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 10 MM MG2+ AND 200 MM RB+ FOR 1800 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 1 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 3 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikadygra >6dpn_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 E188A IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 200 MM K+ FOR 200 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 1 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgaikadygr >6dpo_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 E188A IN COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 2 MM MG2+ AND 200 MM K+ FOR 360 S AT 21 C organism=BACILLUS HALODURANS DNA sequence DC(C1) DG(C2) DA(C3) DT(C4) DG(C5) DT(C6) chainA ( 17) ASN77 0 1 4 0 0 0 ( 45) ASN105 0 0 1 7 0 0 ( 46) ASN106 0 0 0 5 0 0 ( 74) GLN134 0 0 0 0 2 1 ( 75) THR135 0 0 0 0 1 0 prot.sequence eeiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtNNmgeflaivhglrylkernsrkpiysdsQTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgaikadyg >6dsu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I PRE-INSERTION COMPLEX STRUCTURE organism=Geobacillus stearothermophilus DNA sequence DA(T4):DT(P10) DC(T5):DG(P9) DG(T6):DC(P8) DT(T7):DA(P7) DG(T8):DC(P6) DA(T9):DT(P5) DT(T10):DA(P4) DC(T11):DG(P3) DG(T12):DC(P2) DC(T13):DG(P1) chainA (283) LYS582 0 0 0 5 2 0 0 0 0 0 (323) ASN622 0 0 0 1 0 0 0 0 0 0 (326) ASN625 0 1 5 1 0 0 0 0 0 0 (411) PHE710 10 0 0 0 0 0 0 0 0 0 (415) TYR714 12 0 0 0 0 0 0 0 0 0 (417) ILE716 4 0 0 0 0 0 0 0 0 0 prot.sequence aftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpdtkkvhtifnqaltqtgrlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6dsv_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I POST-CHEMISTRY (N+2) STRUCTURE organism=Geobacillus stearothermophilus DNA sequence DT(T4):DA(P11) DA(T5):DT(P10) DC(T6):DG(P9) DG(T7):DC(P8) DT(T8):DA(P7) DG(T9):DC(P6) DA(T10):DT(P5) DT(T11):DA(P4) DC(T12):DG(P3) DG(T13):DC(P2) DC(T14):DG(P1) chainA (283) LYS582 0 0 0 6 2 0 0 0 0 0 0 (326) ASN625 0 2 5 2 0 0 0 0 0 0 0 (411) PHE710 19 0 0 0 0 0 0 0 0 0 0 (415) TYR714 21 0 0 0 0 0 0 0 0 0 0 (417) ILE716 4 0 0 0 0 0 0 0 0 0 0 prot.sequence aftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpdtkkvhtifnqaltqtgrlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiqgsaadiikkamidlnarlkeerlqarlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6dsw_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I PRE-CHEMISTRY (N) STRUCTURE organism=Geobacillus stearothermophilus DNA sequence DG(P1):DC(T15) DC(P2):DG(T14) DG(P3):DC(T13) DA(P4):DT(T12) DT(P5):DA(T11) DC(P6):DG(T10) DA(P7):DT(T9) DC(P8):DG(T8) DG(P9):DC(T7) chainA (283) LYS582 0 0 0 0 3 6 0 0 0 (288) TYR587 0 0 0 0 0 0 1 0 0 (316) ARG615 0 0 0 0 0 0 0 3 11 (326) ASN625 0 0 0 0 0 3 6 1 0 (330) ARG629 0 0 0 0 0 0 0 8 4 (415) TYR714 0 0 0 0 0 0 0 0 46 (498) GLN797 0 0 0 0 0 0 0 0 4 (530) HIS829 0 0 0 0 0 0 0 1 0 prot.sequence aftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6dsx_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I POST-CHEMISTRY (N+1 WITH DATP SOAK) STRUCTURE organism=Geobacillus stearothermophilus DNA sequence DT(T5):DA(P10) DA(T6):DT(P9) DC(T7):DG(P8) DG(T8):DC(P7) DT(T9):DA(P6) DG(T10):DC(P5) DA(T11):DT(P4) DT(T12):DA(P3) DC(T13):DG(P2) DG(T14):DC(P1) DC(T15):DG(P0) chainA (286) LYS582 0 0 0 5 3 0 0 0 0 0 0 (291) TYR587 0 0 1 0 0 0 0 0 0 0 0 (319) ARG615 4 1 0 0 0 0 0 0 0 0 0 (326) ASN622 0 0 1 0 0 0 0 0 0 0 0 (329) ASN625 0 1 10 2 0 0 0 0 0 0 0 (418) TYR714 39 0 0 0 0 0 0 0 0 0 0 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6dsy_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I POST-CHEMISTRY (N+1) STRUCTURE organism=Geobacillus stearothermophilus DNA sequence DG(P1):DC(T15) DC(P2):DG(T14) DG(P3):DC(T13) DA(P4):DT(T12) DT(P5):DA(T11) DC(P6):DG(T10) DA(P7):DT(T9) DC(P8):DG(T8) DG(P9):DC(T7) DT(P10):DA(T6) chainA (283) LYS582 0 0 0 0 0 1 3 0 0 0 (326) ASN625 0 0 0 0 0 0 3 5 1 0 (411) PHE710 0 0 0 0 0 0 0 0 0 3 (415) TYR714 0 0 0 0 0 0 0 0 0 14 (417) ILE716 0 0 0 0 0 0 0 0 0 7 prot.sequence aftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpdtkkvhtifnqaltqtgrlsstepnlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6dt8_A:DNA/RNA_polymerases; title=BACTERIOPHAGE N4 RNA POLYMERASE II ELONGATION COMPLEX 1 organism=ENTEROBACTERIA PHAGE N4 DNA sequence DA(C-1) DC(C0) DC(C1) DC(C2) DA(C3) DC(C4) DC(C5) DA(C6) DA(C7) DA(C8) DA(C9) DA(C10) chainA ( 58) HIS59 0 0 0 0 0 0 0 0 14 0 0 0 ( 59) LYS60 0 0 0 0 0 0 0 0 0 9 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 0 1 0 0 (103) ILE104 0 0 0 0 0 0 0 0 0 2 0 0 (104) VAL105 0 0 0 0 0 0 0 0 0 1 0 0 (221) ARG238 0 0 0 1 0 0 0 0 0 0 0 0 (225) TYR242 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence stiehqmhleklynknqllprmrqefeensgidfkaffahigidykfgidamvqmalHKRadlptlvgtlrhhcksaqevadnlfkmasedcfnfdptidkfIViytisddvqheldsfqyplpmvvrpklltknygtgyftcnksvilkknhtdddicldhlnrmnkiplsinwdvahmvknewanldafqkydrtahevmglltqegnkfylthrpdkRgrtYsqgyhvnyqgtswnkavlefaekevid >6dt8_AB:DNA/RNA_polymerases; title=BACTERIOPHAGE N4 RNA POLYMERASE II ELONGATION COMPLEX 1 organism=ENTEROBACTERIA PHAGE N4 DNA sequence DA(C-1) DC(C0) DC(C1) DC(C2) DA(C3) DC(C4) DC(C5) DA(C6) DA(C7) DA(C8) DA(C9) DA(C10) chainA ( 58) HIS59 0 0 0 0 0 0 0 0 14 0 0 0 ( 59) LYS60 0 0 0 0 0 0 0 0 0 9 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 0 1 0 0 (103) ILE104 0 0 0 0 0 0 0 0 0 2 0 0 (104) VAL105 0 0 0 0 0 0 0 0 0 1 0 0 (221) ARG238 0 0 0 1 0 0 0 0 0 0 0 0 (225) TYR242 0 0 0 1 0 0 0 0 0 0 0 0 chainB (143) THR143 0 11 0 0 0 0 0 0 0 0 0 0 (148) SER148 0 1 0 0 0 0 0 0 0 0 0 0 (235) LYS235 6 0 0 0 0 0 0 0 0 0 0 0 (237) ARG237 1 0 0 0 0 0 0 0 0 0 0 0 (245) HIS245 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence stiehqmhleklynknqllprmrqefeensgidfkaffahigidykfgidamvqmalHKRadlptlvgtlrhhcksaqevadnlfkmasedcfnfdptidkfIViytisddvqheldsfqyplpmvvrpklltknygtgyftcnksvilkknhtdddicldhlnrmnkiplsinwdvahmvknewanldafqkydrtahevmglltqegnkfylthrpdkRgrtYsqgyhvnyqgtswnkavlefaekevid/mqtftareylkidiannygldkedwddriawfdknennllnlvreaeepalfyagvkawmdvkegkpigypvaldatssglqilacltgdrraaelcnvvnyrdesgkvkrrdaytviynkmlntlgkgarikrndckqaimTalygSeakpkevfgegimlnvfestmnveapavwelnkfwlqcgnpeafvyhwvmpdgfnvyikvmvnevetvhfldkpydcvrkvqgteeKtRmlsanttHsidglvvrelvrrcdydknqieyikalcngeaeykaseknygkamelwgyyektgfltarifdyldsetiklvntqdildliesmpkkpfhvltvhdcfrclpnygndirrqynnllatiakgdllsfimsqvigqevtigkldptlwedvleteyals >6dta_A:DNA/RNA_polymerases; title=BACTERIOPHAGE N4 RNA POLYMERASE II ELONGATION COMPLEX 2 organism=ENTEROBACTERIA PHAGE N4 DNA sequence DC(C0) DC(C1) DC(C2) DA(C3) DC(C4) DC(C5) DA(C6) DA(C7) DA(C8) DA(C9) DA(C10) chainA ( 57) LEU58 0 0 0 0 0 0 0 1 0 0 0 ( 58) HIS59 0 0 0 0 0 0 0 13 0 0 0 ( 59) LYS60 0 0 0 0 0 0 0 0 10 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 7 0 0 (103) ILE104 0 0 0 0 0 0 0 0 3 0 0 (104) VAL105 0 0 0 0 0 0 0 0 3 0 0 (219) ARG238 0 1 2 0 0 0 0 0 0 0 0 (223) TYR242 0 0 1 0 0 0 0 0 0 0 0 prot.sequence stiehqmhleklynknqllprmrqefeensgidfkaffahigidykfgidamvqmaLHKRadlptlvgtlrhhcksaqevadnlfkmasedcfnfdptidkfIViytisddvqheldsfqyplpmvvrpklltknygtgyftcnksvilkknhtdddicldhlnrmnkiplsinwdvahmvknewanlfqkydrtahevmglltqegnkfylthrpdkRgrtYsqgyhvnyqgtswnkavlefaekevid >6dta_AB:DNA/RNA_polymerases; title=BACTERIOPHAGE N4 RNA POLYMERASE II ELONGATION COMPLEX 2 organism=ENTEROBACTERIA PHAGE N4 DNA sequence DC(C0) DC(C1) DC(C2) DA(C3) DC(C4) DC(C5) DA(C6) DA(C7) DA(C8) DA(C9) DA(C10) chainA ( 57) LEU58 0 0 0 0 0 0 0 1 0 0 0 ( 58) HIS59 0 0 0 0 0 0 0 13 0 0 0 ( 59) LYS60 0 0 0 0 0 0 0 0 10 0 0 ( 60) ARG61 0 0 0 0 0 0 0 0 7 0 0 (103) ILE104 0 0 0 0 0 0 0 0 3 0 0 (104) VAL105 0 0 0 0 0 0 0 0 3 0 0 (219) ARG238 0 1 2 0 0 0 0 0 0 0 0 (223) TYR242 0 0 1 0 0 0 0 0 0 0 0 chainB (143) THR143 12 0 0 0 0 0 0 0 0 0 0 (146) TYR146 3 0 0 0 0 0 0 0 0 0 0 (148) SER148 3 0 0 0 0 0 0 0 0 0 0 (245) HIS245 0 4 0 0 0 0 0 0 0 0 0 prot.sequence stiehqmhleklynknqllprmrqefeensgidfkaffahigidykfgidamvqmaLHKRadlptlvgtlrhhcksaqevadnlfkmasedcfnfdptidkfIViytisddvqheldsfqyplpmvvrpklltknygtgyftcnksvilkknhtdddicldhlnrmnkiplsinwdvahmvknewanlfqkydrtahevmglltqegnkfylthrpdkRgrtYsqgyhvnyqgtswnkavlefaekevid/mqtftareylkidiannygldkedwddriawfdknennllnlvreaeepalfyagvkawmdvkegkpigypvaldatssglqilacltgdrraaelcnvvnyrdesgkvkrrdaytviynkmlntlgkgarikrndckqaimTalYgSeakpkevfgegimlnvfestmnveapavwelnkfwlqcgnpeafvyhwvmpdgfnvyikvmvnevetvhfldkpydcvrkvqgteektrmlsanttHsidglvvrelvrrcdydknqieyikalcngeaeykaseknygkamelwgyyektgfltarifdyldsetiklvntqdildliesmpkkpfhvltvhdcfrclpnygndirrqynnllatiakgdllsfimsqvigqevtigkldptlwedvleteyals >6dta_B:DNA/RNA_polymerases; title=BACTERIOPHAGE N4 RNA POLYMERASE II ELONGATION COMPLEX 2 organism=ENTEROBACTERIA PHAGE N4 DNA sequence DC(C0) DC(C1) DC(C2) DA(C3) DC(C4) DC(C5) DA(C6) DA(C7) DA(C8) DA(C9) DA(C10) chainB (143) THR143 12 0 0 0 0 0 0 0 0 0 0 (146) TYR146 3 0 0 0 0 0 0 0 0 0 0 (148) SER148 3 0 0 0 0 0 0 0 0 0 0 (245) HIS245 0 4 0 0 0 0 0 0 0 0 0 prot.sequence mqtftareylkidiannygldkedwddriawfdknennllnlvreaeepalfyagvkawmdvkegkpigypvaldatssglqilacltgdrraaelcnvvnyrdesgkvkrrdaytviynkmlntlgkgarikrndckqaimTalYgSeakpkevfgegimlnvfestmnveapavwelnkfwlqcgnpeafvyhwvmpdgfnvyikvmvnevetvhfldkpydcvrkvqgteektrmlsanttHsidglvvrelvrrcdydknqieyikalcngeaeykaseknygkamelwgyyektgfltarifdyldsetiklvntqdildliesmpkkpfhvltvhdcfrclpnygndirrqynnllatiakgdllsfimsqvigqevtigkldptlwedvleteyals >6dv9_CDF: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX(ECF SIGMA FACTOR L) CONTAINING 5NT RNA WITH 4NT SPACER organism=? DNA sequence DG(G4):DC(H25) DC(G5):DG(H24) DA(G6):DT(H23) DT(G7):DA(H22) DC(G8):DG(H21) DC(G9):DG(H20) DG(G10):DC(H19) DT(G11):DA(H18) DG(G12):DC(H17) DA(G13):DT(H16) chainC (440) ARG467 0 0 0 0 0 0 0 0 0 6 chainD (285) GLN287 4 0 0 0 0 0 0 0 0 0 (289) ARG291 0 8 6 0 0 0 0 0 0 0 chainF prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/vsgaaaaeaalmralydehaavlwryalrltgdaaqaedvvqetllrawqhpevigdtarparawlftvarnmiiderrsarfrnvvgstdqsgtpeqstpdevnaaldrlliadalaqlsaehraviqrsyyrgwstaqiatdlgiaegtvksrlhyavralrltlqelgvtr >6dvb_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX(ECF SIGMA FACTOR L) CONTAINING 5NT RNA WITH 5NT SPACER organism=? DNA sequence DT(H16):DA(G13) DC(H17):DG(G12) DA(H18):DT(G11) DC(H19):DG(G10) DG(H20):DC(G9) DG(H21):DC(G8) DA(H22):DT(G7) DT(H23):DA(G6) DG(H24):DC(G5) DC(H25):DG(G4) chainC (440) ARG467 1 0 0 0 0 0 0 0 0 0 prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede >6dvb_CDF: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX(ECF SIGMA FACTOR L) CONTAINING 5NT RNA WITH 5NT SPACER organism=? DNA sequence DG(G4):DC(H25) DC(G5):DG(H24) DA(G6):DT(H23) DT(G7):DA(H22) DC(G8):DG(H21) DC(G9):DG(H20) DG(G10):DC(H19) DT(G11):DA(H18) DG(G12):DC(H17) DA(G13):DT(H16) chainC (440) ARG467 0 0 0 0 0 0 0 0 0 1 chainD (285) GLN287 4 0 0 0 0 0 0 0 0 0 (289) ARG291 0 7 2 0 0 0 0 0 0 0 chainF prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/vsgaaaaeaalmralydehaavlwryalrltgdaaqaedvvqetllrawqhpevigdtarparawlftvarnmiiderrsarfrnvvgstdqsgtpeqstpdevnaaldrlliadalaqlsaehraviqrsyyrgwstaqiatdlgiaegtvksrlhyavralrltlqelgvtr >6dvc_CDF: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX(ECF SIGMA FACTOR L) CONTAINING 5NT RNA WITH 6NT SPACER organism=? DNA sequence DT(H16):DA(G13) DC(H17):DG(G12) DA(H18):DT(G11) DC(H19):DG(G10) DG(H20):DC(G9) DG(H21):DC(G8) DA(H22):DT(G7) DT(H23):DA(G6) DG(H24):DC(G5) DC(H25):DG(G4) chainC (440) ARG467 3 0 0 0 0 0 0 0 0 0 chainD (285) GLN287 0 0 0 0 0 0 0 0 0 4 (289) ARG291 0 0 0 0 0 0 0 4 8 0 chainF prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/vsgaaaaeaalmralydehaavlwryalrltgdaaqaedvvqetllrawqhpevigdtarparawlftvarnmiiderrsarfrnvvgstdqsgtpeqstpdevnaaldrlliadalaqlsaehraviqrsyyrgwstaqiatdlgiaegtvksrlhyavralrltlqelgvtr >6dvd_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX(ECF SIGMA FACTOR L) WITH 6 NT SPACER AND BROMINE LABELLED IN POSITION "-11 organism=? DNA sequence DG(G4):DC(H25) DC(G5):DG(H24) DA(G6):DT(H23) DT(G7):DA(H22) DC(G8):DG(H21) DC(G9):DG(H20) DG(G10):DC(H19) DT(G11):DA(H18) DG(G12):DC(H17) DA(G13):DT(H16) chainC (440) ARG467 0 0 0 0 0 0 0 0 0 6 prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede >6dvd_CD: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX(ECF SIGMA FACTOR L) WITH 6 NT SPACER AND BROMINE LABELLED IN POSITION "-11 organism=? DNA sequence DG(G4):DC(H25) DC(G5):DG(H24) DA(G6):DT(H23) DT(G7):DA(H22) DC(G8):DG(H21) DC(G9):DG(H20) DG(G10):DC(H19) DT(G11):DA(H18) DG(G12):DC(H17) DA(G13):DT(H16) chainC (440) ARG467 0 0 0 0 0 0 0 0 0 6 chainD (285) GLN287 4 0 0 0 0 0 0 0 0 0 (289) ARG291 0 6 6 0 0 0 0 0 0 0 prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa >6dve_CD: title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX(ECF SELENOMETHIONINE-LABELLED SIGMA FACTOR L) WITH 6 NT SPACER organism=? DNA sequence DG(G4):DC(H25) DC(G5):DG(H24) DA(G6):DT(H23) DT(G7):DA(H22) DC(G8):DG(H21) DC(G9):DG(H20) DG(G10):DC(H19) DT(G11):DA(H18) DG(G12):DC(H17) DA(G13):DT(H16) chainC (439) GLU466 0 0 0 0 0 0 0 0 0 1 (440) ARG467 0 0 0 0 0 0 0 0 0 8 chainD (285) GLN287 5 0 0 0 0 0 0 0 0 0 (289) ARG291 0 8 4 0 0 0 0 0 0 0 prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa >6dve_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX(ECF SELENOMETHIONINE-LABELLED SIGMA FACTOR L) WITH 6 NT SPACER organism=? DNA sequence DC(H2) DG(H3) DT(H4) DG(H5) DT(H6) DC(H7) DA(H8) DG(H9) DT(H10) DA(H11) DA(H12) DC(H13) DT(H14) DG(H15) DT(H16) DC(H17) DA(H18) DC(H19) DG(H20) DG(H21) DA(H22) DT(H23) DG(H24) DC(H25) chainF ( 22) VAL25 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG28 0 0 0 0 0 0 0 19 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU31 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG50 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) HIS54 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) GLU56 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) VAL57 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ASP60 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG63 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ALA65 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ALA67 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TRP68 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PHE70 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR71 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) VAL72 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ASN75 0 17 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP79 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vsgaaaaeaalmralydehaaVlwRyaLrltgdaaqaedvvqetllRawqHpEVigDtaRpArAWlFTVarNmiiDerrsarfrnvvgstdqsgtpeqstpdevnaaldrlliadalaqlsaehraviqrsyyrgwstaqiatdlgiaegtvksrlhyavralrltlqelgvtr >6dww_A:Ribonuclease_H-like;Hermes_dimerisation_domain; title=HERMES TRANSPOSASE DELETION DIMER COMPLEX WITH (A/T) DNA AND MN2+ organism=Musca domestica DNA sequence DC(C1):DG(B16) DT(C2):DA(B15) DT(C3):DA(B14) DG(C4):DC(B13) DT(C5):DA(B12) DT(C6):DA(B11) DG(C7):DC(B10) DT(C8):DA(B9) DT(C9):DA(B8) DG(C10):DC(B7) DT(C11):DA(B6) DT(C12):DA(B5) DC(C13):DG(B4) DT(C14):DA(B3) DC(C15):DG(B2) DT(C16):DA(B1) chainA (238) ARG318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (292) LYS372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 (295) GLN375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (446) GLU572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (447) ARG573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 (450) SER576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 prot.sequence relktvsadckkeaiekcaqwvvrdcrpfsavsgsgfidmikffikvgaeygehvnveellpspitlsrkvtsdakekkalisreiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstaeniykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetpelnmpilacknivkyfkkanlqhrlrsslksecptRwnstytmlrsildnwesviqilseagetqrivhinksiiqtmvnildgferifKelQtcsspslcfvvpsilkvkeicspdvgdvadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedlelinrmssfpvspsdefefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaasERtfSlagniitekrnrigqqtvdsllflnsfyknfck >6dwy_A:Ribonuclease_H-like;Hermes_dimerisation_domain; title=HERMES TRANSPOSASE DELETION DIMER COMPLEX WITH (C/G) DNA AND CA2+ organism=Musca domestica DNA sequence DA(B1):DT(C16) DG(B2):DC(C15) DA(B3):DT(C14) DG(B4):DC(C13) DA(B5):DT(C12) DA(B6):DT(C11) DC(B7):DG(C10) DA(B8):DT(C9) DA(B9):DT(C8) DC(B10):DG(C7) DA(B11):DT(C6) DA(B12):DT(C5) DC(B13):DG(C4) DA(B14):DT(C3) DA(B15):DT(C2) DG(B16):DC(C1) chainA (238) ARG318 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) LYS372 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) GLN375 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) GLU572 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) ARG573 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) SER576 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence relktvsadckkeaiekcaqwvvrdcrpfsavsgsgfidmikffikvgaeygehvnveellpspitlsrkvtsdakekkalisreiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstaeniykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetpelnmpilacknivkyfkkanlqhrlrsslksecptRwnstytmlrsildnwesviqilseagetqrivhinksiiqtmvnildgferifKelQtcsspslcfvvpsilkvkeicspdvgdvadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedlelinrmssfpvspsdefefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaasERtfSlagniitekrnrigqqtvdsllflnsfyknfck >6dwz_E:Ribonuclease_H-like;Hermes_dimerisation_domain; title=HERMES TRANSPOSASE DELETION DIMER COMPLEX WITH (C/G) DNA organism=Musca domestica DNA sequence DC(G1):DG(F16) DT(G2):DA(F15) DT(G3):DA(F14) DG(G4):DC(F13) DT(G5):DA(F12) DT(G6):DA(F11) DG(G7):DC(F10) DT(G8):DA(F9) DT(G9):DA(F8) DG(G10):DC(F7) DT(G11):DA(F6) DT(G12):DA(F5) DC(G13):DG(F4) DT(G14):DA(F3) DC(G15):DG(F2) chainE (232) LYS312 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence relktvsadckkeaiekcaqwvvrdcrpfsavsgsgfidmikffikvgaeygehvnveellpspitlsrkvtsdakekkalisreiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstaeniykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetpelnmpilacknivkyfkkanlqhrlrsslKsecptrwnstytmlrsildnwesviqilseagetqrivhinksiiqtmvnildgferifkelqtcsspslcfvvpsilkvkeicspdvgdvadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedlelpvspsdefefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaasertfslagniitekrnrigqqtvdsllflnsfyknfck >6dx0_A:Ribonuclease_H-like;Hermes_dimerisation_domain; title=HERMES TRANSPOSASE DELETION DIMER COMPLEX WITH (A/T) DNA organism=Musca domestica DNA sequence DA(B1):DT(C16) DG(B2):DC(C15) DA(B3):DT(C14) DG(B4):DC(C13) DA(B5):DT(C12) DA(B6):DT(C11) DC(B7):DG(C10) DA(B8):DT(C9) DA(B9):DT(C8) DC(B10):DG(C7) DA(B11):DT(C6) DA(B12):DT(C5) DC(B13):DG(C4) DA(B14):DT(C3) DA(B15):DT(C2) DG(B16):DC(C1) chainA (238) ARG318 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) LYS372 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) GLN375 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) GLU572 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) ARG573 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) SER576 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence relktvsadckkeaiekcaqwvvrdcrpfsavsgsgfidmikffikvgaeygehvnveellpspitlsrkvtsdakekkalisreiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstaeniykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetpelnmpilacknivkyfkkanlqhrlrsslksecptRwnstytmlrsildnwesviqilseagetqrivhinksiiqtmvnildgferifKelQtcsspslcfvvpsilkvkeicspdvgdvadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedlelinrmssfpvspsdefefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaasERtfSlagniitekrnrigqqtvdsllflnsfyknfck >6dzt_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF NUCLEOSOME IN COMPLEX WITH A SINGLE CHAIN ANTIBODY FRAGMENT organism=DROSOPHILA MELANOGASTER DNA sequence DA(J1):DT(I147) DC(J3):DG(I145) DG(J4):DC(I144) DA(J5):DT(I143) DG(J6):DC(I142) DA(J7):DT(I141) DA(J8):DT(I140) DT(J9):DA(I139) DC(J10):DG(I138) DC(J11):DG(I137) DC(J12):DG(I136) DG(J13):DC(I135) DG(J14):DC(I134) DT(J15):DA(I133) DG(J16):DC(I132) DC(J17):DG(I131) DC(J18):DG(I130) DG(J19):DC(I129) DA(J20):DT(I128) DG(J21):DC(I127) DG(J22):DC(I126) DC(J23):DG(I125) DC(J24):DG(I124) DG(J25):DC(I123) DC(J26):DG(I122) DT(J27):DA(I121) DC(J28):DG(I120) DA(J29):DT(I119) DA(J30):DT(I118) DT(J31):DA(I117) DT(J32):DA(I116) DG(J33):DC(I115) DG(J34):DC(I114) DT(J35):DA(I113) DC(J36):DG(I112) DG(J37):DC(I111) DT(J38):DA(I110) DA(J39):DT(I109) DG(J40):DC(I108) DA(J41):DT(I107) DC(J42):DG(I106) DA(J43):DT(I105) DG(J44):DC(I104) DC(J45):DG(I103) DT(J46):DA(I102) DC(J47):DG(I101) DT(J48):DA(I100) DA(J49):DT(I99) DG(J50):DC(I98) DC(J51):DG(I97) DA(J52):DT(I96) DC(J53):DG(I95) DC(J54):DG(I94) DG(J55):DC(I93) DC(J56):DG(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DC(J62):DG(I86) DG(J63):DC(I85) DC(J64):DG(I84) DA(J65):DT(I83) DC(J66):DG(I82) DG(J67):DC(I81) DT(J68):DA(I80) DA(J69):DT(I79) DC(J70):DG(I78) DG(J71):DC(I77) DC(J72):DG(I76) DG(J73):DC(I75) DC(J74):DG(I74) DT(J75):DA(I73) DG(J76):DC(I72) DT(J77):DA(I71) DC(J78):DG(I70) DC(J79):DG(I69) DC(J80):DG(I68) DC(J81):DG(I67) DC(J82):DG(I66) DG(J83):DC(I65) DC(J84):DG(I64) DG(J85):DC(I63) DT(J86):DA(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DC(J92):DG(I56) DC(J93):DG(I55) DG(J94):DC(I54) DC(J95):DG(I53) DC(J96):DG(I52) DA(J97):DT(I51) DA(J98):DT(I50) DG(J99):DC(I49) DG(J100):DC(I48) DG(J101):DC(I47) DG(J102):DC(I46) DA(J103):DT(I45) DT(J104):DA(I44) DT(J105):DA(I43) DA(J106):DT(I42) DC(J107):DG(I41) DT(J108):DA(I40) DC(J109):DG(I39) DC(J110):DG(I38) DC(J111):DG(I37) DT(J112):DA(I36) DA(J113):DT(I35) DG(J114):DC(I34) DT(J115):DA(I33) DC(J116):DG(I32) DT(J117):DA(I31) DC(J118):DG(I30) DC(J119):DG(I29) DA(J120):DT(I28) DG(J121):DC(I27) DG(J122):DC(I26) DC(J123):DG(I25) DA(J124):DT(I24) DC(J125):DG(I23) DG(J126):DC(I22) DT(J127):DA(I21) DG(J128):DC(I20) DT(J129):DA(I19) DC(J130):DG(I18) DA(J131):DT(I17) DG(J132):DC(I16) DA(J133):DT(I15) DT(J134):DA(I14) DA(J135):DT(I13) DT(J136):DA(I12) DA(J137):DT(I11) DT(J138):DA(I10) DA(J139):DT(I9) DC(J140):DG(I8) DA(J141):DT(I7) DT(J142):DA(I6) DC(J143):DG(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) DT(J147):DA(I1) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainF chainG chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/hrkVlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvfleNvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kaksrsnraglqfpvgrihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllpk/rkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/rKVLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aKSRsnraglqfpvgrihrllrkgnyaervgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllpkk/rkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >6dzt_C:Histone-fold; title=CRYO-EM STRUCTURE OF NUCLEOSOME IN COMPLEX WITH A SINGLE CHAIN ANTIBODY FRAGMENT organism=DROSOPHILA MELANOGASTER DNA sequence DA(J1):DT(I147) DC(J3):DG(I145) DG(J4):DC(I144) DA(J5):DT(I143) DG(J6):DC(I142) DA(J7):DT(I141) DA(J8):DT(I140) DT(J9):DA(I139) DC(J10):DG(I138) DC(J11):DG(I137) DC(J12):DG(I136) DG(J13):DC(I135) DG(J14):DC(I134) DT(J15):DA(I133) DG(J16):DC(I132) DC(J17):DG(I131) DC(J18):DG(I130) DG(J19):DC(I129) DA(J20):DT(I128) DG(J21):DC(I127) DG(J22):DC(I126) DC(J23):DG(I125) DC(J24):DG(I124) DG(J25):DC(I123) DC(J26):DG(I122) DT(J27):DA(I121) DC(J28):DG(I120) DA(J29):DT(I119) DA(J30):DT(I118) DT(J31):DA(I117) DT(J32):DA(I116) DG(J33):DC(I115) DG(J34):DC(I114) DT(J35):DA(I113) DC(J36):DG(I112) DG(J37):DC(I111) DT(J38):DA(I110) DA(J39):DT(I109) DG(J40):DC(I108) DA(J41):DT(I107) DC(J42):DG(I106) DA(J43):DT(I105) DG(J44):DC(I104) DC(J45):DG(I103) DT(J46):DA(I102) DC(J47):DG(I101) DT(J48):DA(I100) DA(J49):DT(I99) DG(J50):DC(I98) DC(J51):DG(I97) DA(J52):DT(I96) DC(J53):DG(I95) DC(J54):DG(I94) DG(J55):DC(I93) DC(J56):DG(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DC(J62):DG(I86) DG(J63):DC(I85) DC(J64):DG(I84) DA(J65):DT(I83) DC(J66):DG(I82) DG(J67):DC(I81) DT(J68):DA(I80) DA(J69):DT(I79) DC(J70):DG(I78) DG(J71):DC(I77) DC(J72):DG(I76) DG(J73):DC(I75) DC(J74):DG(I74) DT(J75):DA(I73) DG(J76):DC(I72) DT(J77):DA(I71) DC(J78):DG(I70) DC(J79):DG(I69) DC(J80):DG(I68) DC(J81):DG(I67) DC(J82):DG(I66) DG(J83):DC(I65) DC(J84):DG(I64) DG(J85):DC(I63) DT(J86):DA(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DC(J92):DG(I56) DC(J93):DG(I55) DG(J94):DC(I54) DC(J95):DG(I53) DC(J96):DG(I52) DA(J97):DT(I51) DA(J98):DT(I50) DG(J99):DC(I49) DG(J100):DC(I48) DG(J101):DC(I47) DG(J102):DC(I46) DA(J103):DT(I45) DT(J104):DA(I44) DT(J105):DA(I43) DA(J106):DT(I42) DC(J107):DG(I41) DT(J108):DA(I40) DC(J109):DG(I39) DC(J110):DG(I38) DC(J111):DG(I37) DT(J112):DA(I36) DA(J113):DT(I35) DG(J114):DC(I34) DT(J115):DA(I33) DC(J116):DG(I32) DT(J117):DA(I31) DC(J118):DG(I30) DC(J119):DG(I29) DA(J120):DT(I28) DG(J121):DC(I27) DG(J122):DC(I26) DC(J123):DG(I25) DA(J124):DT(I24) DC(J125):DG(I23) DG(J126):DC(I22) DT(J127):DA(I21) DG(J128):DC(I20) DT(J129):DA(I19) DC(J130):DG(I18) DA(J131):DT(I17) DG(J132):DC(I16) DA(J133):DT(I15) DT(J134):DA(I14) DA(J135):DT(I13) DT(J136):DA(I12) DA(J137):DT(I11) DT(J138):DA(I10) DA(J139):DT(I9) DC(J140):DG(I8) DA(J141):DT(I7) DT(J142):DA(I6) DC(J143):DG(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) DT(J147):DA(I1) chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaksrsnraglqfpvgrihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllpk >6e0c_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE CENP-A NUCLEOSOME (W601) IN COMPLEX WITH A SINGLE CHAIN ANTIBODY FRAGMENT organism=HOMO SAPIENS DNA sequence DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DA(J5):DT(I143) DG(J6):DC(I142) DA(J7):DT(I141) DA(J8):DT(I140) DT(J9):DA(I139) DC(J10):DG(I138) DC(J11):DG(I137) DC(J12):DG(I136) DG(J13):DC(I135) DG(J14):DC(I134) DT(J15):DA(I133) DG(J16):DC(I132) DC(J17):DG(I131) DC(J18):DG(I130) DG(J19):DC(I129) DA(J20):DT(I128) DG(J21):DC(I127) DG(J22):DC(I126) DC(J23):DG(I125) DC(J24):DG(I124) DG(J25):DC(I123) DC(J26):DG(I122) DT(J27):DA(I121) DC(J28):DG(I120) DA(J29):DT(I119) DA(J30):DT(I118) DT(J31):DA(I117) DT(J32):DA(I116) DG(J33):DC(I115) DG(J34):DC(I114) DT(J35):DA(I113) DC(J36):DG(I112) DG(J37):DC(I111) DT(J38):DA(I110) DA(J39):DT(I109) DG(J40):DC(I108) DA(J41):DT(I107) DC(J42):DG(I106) DA(J43):DT(I105) DG(J44):DC(I104) DC(J45):DG(I103) DT(J46):DA(I102) DC(J47):DG(I101) DT(J48):DA(I100) DA(J49):DT(I99) DG(J50):DC(I98) DC(J51):DG(I97) DA(J52):DT(I96) DC(J53):DG(I95) DC(J54):DG(I94) DG(J55):DC(I93) DC(J56):DG(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DC(J62):DG(I86) DG(J63):DC(I85) DC(J64):DG(I84) DA(J65):DT(I83) DC(J66):DG(I82) DG(J67):DC(I81) DT(J68):DA(I80) DA(J69):DT(I79) DC(J70):DG(I78) DG(J71):DC(I77) DC(J72):DG(I76) DG(J73):DC(I75) DC(J74):DG(I74) DT(J75):DA(I73) DG(J76):DC(I72) DT(J77):DA(I71) DC(J78):DG(I70) DC(J79):DG(I69) DC(J80):DG(I68) DC(J81):DG(I67) DC(J82):DG(I66) DG(J83):DC(I65) DC(J84):DG(I64) DG(J85):DC(I63) DT(J86):DA(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DC(J92):DG(I56) DC(J93):DG(I55) DG(J94):DC(I54) DC(J95):DG(I53) DC(J96):DG(I52) DA(J97):DT(I51) DA(J98):DT(I50) DG(J99):DC(I49) DG(J100):DC(I48) DG(J101):DC(I47) DG(J102):DC(I46) DA(J103):DT(I45) DT(J104):DA(I44) DT(J105):DA(I43) DA(J106):DT(I42) DC(J107):DG(I41) DT(J108):DA(I40) DC(J109):DG(I39) DC(J110):DG(I38) DC(J111):DG(I37) DT(J112):DA(I36) DA(J113):DT(I35) DG(J114):DC(I34) DT(J115):DA(I33) DC(J116):DG(I32) DT(J117):DA(I31) DC(J118):DG(I30) DC(J119):DG(I29) DA(J120):DT(I28) DG(J121):DC(I27) DG(J122):DC(I26) DC(J123):DG(I25) DA(J124):DT(I24) DC(J125):DG(I23) DG(J126):DC(I22) DT(J127):DA(I21) DG(J128):DC(I20) DT(J129):DA(I19) DC(J130):DG(I18) DA(J131):DT(I17) DG(J132):DC(I16) DA(J133):DT(I15) DT(J134):DA(I14) DA(J135):DT(I13) DT(J136):DA(I12) DA(J137):DT(I11) DT(J138):DA(I10) DA(J139):DT(I9) DC(J140):DG(I8) DA(J141):DT(I7) DT(J142):DA(I6) DC(J143):DG(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) DT(J147):DA(I1) chainA ( 2) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rRrqgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleeglg/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavll/kRsrkesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/rRrqgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleeglg/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavll/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6e0p_A:Histone-fold; title=CRYO-EM STRUCTURE OF THE CENTROMERIC NUCLEOSOME (NATIVE ALPHA SATELLITE DNA) IN COMPLEX WITH A SINGLE CHAIN ANTIBODY FRAGMENT organism=HOMO SAPIENS DNA sequence DA(I1):DT(J145) DT(I2):DA(J144) DC(I3):DG(J143) DA(I4):DT(J142) DA(I5):DT(J141) DT(I6):DA(J140) DA(I7):DT(J139) DT(I8):DA(J138) DC(I9):DG(J137) DC(I10):DG(J136) DA(I11):DT(J135) DC(I12):DG(J134) DC(I13):DG(J133) DT(I14):DA(J132) DG(I15):DC(J131) DC(I16):DG(J130) DA(I17):DT(J129) DG(I18):DC(J128) DA(I19):DT(J127) DT(I20):DA(J126) DT(I21):DA(J125) DC(I22):DG(J124) DT(I23):DA(J123) DA(I24):DT(J122) DC(I25):DG(J121) DC(I26):DG(J120) DA(I27):DT(J119) DA(I28):DT(J118) DA(I29):DT(J117) DA(I30):DT(J116) DG(I31):DC(J115) DT(I32):DA(J114) DG(I33):DC(J113) DT(I34):DA(J112) DA(I35):DT(J111) DT(I36):DA(J110) DT(I37):DA(J109) DT(I38):DA(J108) DG(I39):DC(J107) DG(I40):DC(J106) DA(I41):DT(J105) DA(I42):DT(J104) DA(I43):DT(J103) DC(I44):DG(J102) DT(I45):DA(J101) DG(I46):DC(J100) DC(I47):DG(J99) DT(I48):DA(J98) DC(I49):DG(J97) DC(I50):DG(J96) DA(I51):DT(J95) DT(I52):DA(J94) DC(I53):DG(J93) DA(I54):DT(J92) DA(I55):DT(J91) DA(I56):DT(J90) DA(I57):DT(J89) DG(I58):DC(J88) DG(I59):DC(J87) DC(I60):DG(J86) DA(I61):DT(J85) DT(I62):DA(J84) DG(I63):DC(J83) DT(I64):DA(J82) DT(I65):DA(J81) DC(I66):DG(J80) DA(I67):DT(J79) DG(I68):DC(J78) DC(I69):DG(J77) DT(I70):DA(J76) DC(I71):DG(J75) DT(I72):DA(J74) DG(I73):DC(J73) DT(I74):DA(J72) DG(I75):DC(J71) DA(I76):DT(J70) DG(I77):DC(J69) DT(I78):DA(J68) DG(I79):DC(J67) DA(I80):DT(J66) DA(I81):DT(J65) DA(I82):DT(J64) DC(I83):DG(J63) DT(I84):DA(J62) DC(I85):DG(J61) DC(I86):DG(J60) DA(I87):DT(J59) DT(I88):DA(J58) DC(I89):DG(J57) DA(I90):DT(J56) DT(I91):DA(J55) DC(I92):DG(J54) DA(I93):DT(J53) DC(I94):DG(J52) DA(I95):DT(J51) DA(I96):DT(J50) DA(I97):DT(J49) DG(I98):DC(J48) DA(I99):DT(J47) DA(I100):DT(J46) DT(I101):DA(J45) DA(I102):DT(J44) DT(I103):DA(J43) DT(I104):DA(J42) DC(I105):DG(J41) DT(I106):DA(J40) DG(I107):DC(J39) DA(I108):DT(J38) DG(I109):DC(J37) DA(I110):DT(J36) DA(I111):DT(J35) DT(I112):DA(J34) DG(I113):DC(J33) DC(I114):DG(J32) DT(I115):DA(J31) DT(I116):DA(J30) DC(I117):DG(J29) DC(I118):DG(J28) DG(I119):DC(J27) DT(I120):DA(J26) DT(I121):DA(J25) DT(I122):DA(J24) DG(I123):DC(J23) DC(I124):DG(J22) DC(I125):DG(J21) DT(I126):DA(J20) DT(I127):DA(J19) DT(I128):DA(J18) DT(I129):DA(J17) DA(I130):DT(J16) DT(I131):DA(J15) DA(I132):DT(J14) DT(I133):DA(J13) DG(I134):DC(J12) DA(I135):DT(J11) DA(I136):DT(J10) DC(I137):DG(J9) DT(I138):DA(J8) DT(I139):DA(J7) DC(I140):DG(J6) DC(I141):DG(J5) DT(I142):DA(J4) DG(I143):DC(J3) DA(I144):DT(J2) DT(I145):DA(J1) chainA ( 2) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rRrqgwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleeglg >6e0p_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE CENTROMERIC NUCLEOSOME (NATIVE ALPHA SATELLITE DNA) IN COMPLEX WITH A SINGLE CHAIN ANTIBODY FRAGMENT organism=HOMO SAPIENS DNA sequence DA(I1):DT(J145) DT(I2):DA(J144) DC(I3):DG(J143) DA(I4):DT(J142) DA(I5):DT(J141) DT(I6):DA(J140) DA(I7):DT(J139) DT(I8):DA(J138) DC(I9):DG(J137) DC(I10):DG(J136) DA(I11):DT(J135) DC(I12):DG(J134) DC(I13):DG(J133) DT(I14):DA(J132) DG(I15):DC(J131) DC(I16):DG(J130) DA(I17):DT(J129) DG(I18):DC(J128) DA(I19):DT(J127) DT(I20):DA(J126) DT(I21):DA(J125) DC(I22):DG(J124) DT(I23):DA(J123) DA(I24):DT(J122) DC(I25):DG(J121) DC(I26):DG(J120) DA(I27):DT(J119) DA(I28):DT(J118) DA(I29):DT(J117) DA(I30):DT(J116) DG(I31):DC(J115) DT(I32):DA(J114) DG(I33):DC(J113) DT(I34):DA(J112) DA(I35):DT(J111) DT(I36):DA(J110) DT(I37):DA(J109) DT(I38):DA(J108) DG(I39):DC(J107) DG(I40):DC(J106) DA(I41):DT(J105) DA(I42):DT(J104) DA(I43):DT(J103) DC(I44):DG(J102) DT(I45):DA(J101) DG(I46):DC(J100) DC(I47):DG(J99) DT(I48):DA(J98) DC(I49):DG(J97) DC(I50):DG(J96) DA(I51):DT(J95) DT(I52):DA(J94) DC(I53):DG(J93) DA(I54):DT(J92) DA(I55):DT(J91) DA(I56):DT(J90) DA(I57):DT(J89) DG(I58):DC(J88) DG(I59):DC(J87) DC(I60):DG(J86) DA(I61):DT(J85) DT(I62):DA(J84) DG(I63):DC(J83) DT(I64):DA(J82) DT(I65):DA(J81) DC(I66):DG(J80) DA(I67):DT(J79) DG(I68):DC(J78) DC(I69):DG(J77) DT(I70):DA(J76) DC(I71):DG(J75) DT(I72):DA(J74) DG(I73):DC(J73) DT(I74):DA(J72) DG(I75):DC(J71) DA(I76):DT(J70) DG(I77):DC(J69) DT(I78):DA(J68) DG(I79):DC(J67) DA(I80):DT(J66) DA(I81):DT(J65) DA(I82):DT(J64) DC(I83):DG(J63) DT(I84):DA(J62) DC(I85):DG(J61) DC(I86):DG(J60) DA(I87):DT(J59) DT(I88):DA(J58) DC(I89):DG(J57) DA(I90):DT(J56) DT(I91):DA(J55) DC(I92):DG(J54) DA(I93):DT(J53) DC(I94):DG(J52) DA(I95):DT(J51) DA(I96):DT(J50) DA(I97):DT(J49) DG(I98):DC(J48) DA(I99):DT(J47) DA(I100):DT(J46) DT(I101):DA(J45) DA(I102):DT(J44) DT(I103):DA(J43) DT(I104):DA(J42) DC(I105):DG(J41) DT(I106):DA(J40) DG(I107):DC(J39) DA(I108):DT(J38) DG(I109):DC(J37) DA(I110):DT(J36) DA(I111):DT(J35) DT(I112):DA(J34) DG(I113):DC(J33) DC(I114):DG(J32) DT(I115):DA(J31) DT(I116):DA(J30) DC(I117):DG(J29) DC(I118):DG(J28) DG(I119):DC(J27) DT(I120):DA(J26) DT(I121):DA(J25) DT(I122):DA(J24) DG(I123):DC(J23) DC(I124):DG(J22) DC(I125):DG(J21) DT(I126):DA(J20) DT(I127):DA(J19) DT(I128):DA(J18) DT(I129):DA(J17) DA(I130):DT(J16) DT(I131):DA(J15) DA(I132):DT(J14) DT(I133):DA(J13) DG(I134):DC(J12) DA(I135):DT(J11) DA(I136):DT(J10) DC(I137):DG(J9) DT(I138):DA(J8) DT(I139):DA(J7) DC(I140):DG(J6) DC(I141):DG(J5) DT(I142):DA(J4) DG(I143):DC(J3) DA(I144):DT(J2) DT(I145):DA(J1) chainA ( 2) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rRrqgwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleeglg/rDniqgitkpairrlarrggvkrIsgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavll/krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/rRrqgwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleeglg/rDniqgitkpairrlarrggvkrIsgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavll/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6e33_A:Zn2/Cys6_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PHO7-DNA COMPLEX organism=Schizosaccharomyces pombe (strain 972 / ATCC 24843) / Schizosaccharomyces pombe (strain 972 / ATCC 24843) DNA sequence DG(B1):DC(C19) DA(B2):DT(C18) DT(B3):DA(C17) DT(B4):DA(C16) DT(B5):DA(C15) DG(B6):DC(C14) DA(B7):DT(C13) DA(B8):DT(C12) DT(B9):DA(C11) DG(B10):DC(C10) DT(B11):DA(C9) DC(B12):DG(C8) DC(B13):DG(C7) DG(B14):DC(C6) DA(B15):DT(C5) DA(B16):DT(C4) DG(B17):DC(C3) DG(B18):DC(C2) DA(B19):DT(C1) chainA ( 6) ARG284 0 0 0 0 0 0 0 0 0 1 9 8 3 0 0 0 0 0 0 ( 9) GLN287 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 ( 20) ASP298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 21) ASN299 0 0 0 0 0 0 0 0 0 0 0 18 7 11 0 0 0 0 0 ( 22) LYS300 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 1 0 0 0 ( 48) ARG326 0 0 0 0 5 9 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG332 0 0 0 0 4 12 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) TYR335 0 0 2 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gkvkkRlpQakracakcqkDNKkcddarpcqrcikaktdcidlprkkRptgvrRgpYk >6e3r_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 8OA AS THE TEMPLATE BASE IN A 1-NUCLEOTIDE GAPPED DNA organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 38 0 0 0 0 ( 29) LYS35 9 0 0 0 0 ( 32) ALA38 4 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqkyrepkdrse >6e3v_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 8OA IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE TTP organism=Homo sapiens DNA sequence DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 1 6 0 0 0 0 0 0 0 (262) TYR271 1 0 0 0 0 0 0 0 0 0 (274) ARG283 3 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6e3w_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 8OA IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE GTP organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DA(P10):DT(T7) chainA (225) LYS234 0 0 0 0 0 0 0 6 0 0 (274) ARG283 0 0 0 0 0 0 0 0 0 3 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6e3x_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 8OA IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE ATP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 38 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 4 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6e8c_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE DOUBLE HOMEODOMAIN OF DUX4 IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DT(C1):DA(B17) DG(C2):DC(B16) DT(C3):DA(B15) DT(C4):DA(B14) DG(C5):DC(B13) DA(C6):DT(B12) DT(C7):DA(B11) DT(C8):DA(B10) DA(C9):DT(B9) DG(C10):DC(B8) DA(C11):DT(B7) DT(C12):DA(B6) DT(C13):DA(B5) DA(C14):DT(B4) DC(C15):DG(B3) DG(C16):DC(B2) DC(C17):DG(B1) chainA ( 5) ARG20 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 ( 8) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 3 8 15 0 0 ( 49) ILE65 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 52) GLN68 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 53) ASN69 0 0 0 0 0 0 0 0 0 0 2 10 6 0 0 0 0 ( 56) SER72 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 79) ARG95 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG98 0 0 12 7 6 0 0 0 0 0 0 0 0 0 0 0 0 (124) ILE140 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 (127) GLN143 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 (128) ASN144 0 0 0 0 6 11 1 0 0 0 0 0 0 0 0 0 0 (132) ARG148 0 0 0 20 11 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rgrgRrrRlvwtpsqsealrafernpypgiatrerlaqaigipeprvqIwfQNerSrqlrqhrresrpwpgrrgppegRrkRtavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrraRhp >6e93_A:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF ZBTB38 C-TERMINAL ZINC FINGERS 6-9 IN COMPLEX WITH METHYLATED DNA organism=Homo sapiens DNA sequence DG(C19):DC(D18) DT(C20):DA(D17) DC(C21):DG(D16) DT(C22):DA(D15) DG(C23):DC(D14) 5CM(C24):DG(D13) DG(C25):5CM(D12) DC(C26):DG(D11) 5CM(C27):DG(D10) DG(C28):5CM(D9) DA(C29):DT(D8) DT(C30):DA(D7) DG(C31):DC(D6) DA(C32):DT(D5) DG(C33):DC(D4) DT(C34):DA(D3) DG(C35):DC(D2) DC(C36):DG(D1) chainA ( 15) SER1023 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 19) MET1027 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 41) VAL1049 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 44) ASN1052 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 ( 47) LYS1055 0 0 0 0 0 0 0 0 1 2 7 0 0 0 0 0 0 0 ( 69) LEU1077 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 71) GLU1079 0 0 0 0 0 0 0 0 8 9 5 0 0 0 0 0 0 0 ( 72) THR1080 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 ( 75) ILE1083 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) TYR1105 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) SER1107 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pyacelcakqfqspStlkMhmrchtgekpyqcktcgrcfsVqgNlqKherihlglkefvcqycnkaftlnETlkiherihtgekryhcqfcfqrflYlStkrnheqrhireh >6e94_A:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF ZBTB38 C-TERMINAL ZINC FINGERS 6-9 K1055R IN COMPLEX WITH METHYLATED DNA organism=Homo sapiens DNA sequence DG(D1):DC(C36) DC(D2):DG(C35) DA(D3):DT(C34) DC(D4):DG(C33) DT(D5):DA(C32) DC(D6):DG(C31) DA(D7):DT(C30) DT(D8):DA(C29) 5CM(D9):DG(C28) DG(D10):5CM(C27) DG(D11):DC(C26) 5CM(D12):DG(C25) DG(D13):5CM(C24) DC(D14):DG(C23) DA(D15):DT(C22) DG(D16):DC(C21) DA(D17):DT(C20) DC(D18):DG(C19) chainA ( 15) SER1023 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) MET1027 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 41) VAL1049 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 44) ASN1052 0 0 0 0 0 0 0 11 6 0 0 0 0 0 0 0 0 0 ( 47) ARG1055 0 0 0 0 0 0 0 10 10 13 0 0 0 0 0 0 0 0 ( 69) LEU1077 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 71) GLU1079 0 0 0 0 0 0 0 4 9 8 0 0 0 0 0 0 0 0 ( 72) THR1080 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 75) ILE1083 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 97) TYR1105 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 99) SER1107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence pyacelcakqfqspStlkMhmrchtgekpyqcktcgrcfsVqgNlqRherihlglkefvcqycnkaftlnETlkiherihtgekryhcqfcfqrflYlStkrnheqrhire >6edb_A: title=CRYSTAL STRUCTURE OF SRY.HCGAS-21BP DSDNA COMPLEX organism=? DNA sequence DG(C2):DC(D22) DA(C3):DT(D21) DT(C4):DA(D20) DC(C5):DG(D19) DC(C6):DG(D18) DG(C7):DC(D17) DG(C8):DC(D16) DG(C9):DC(D15) DA(C10):DT(D14) DT(C11):DA(D13) DC(C12):DG(D12) DT(C13):DA(D11) DA(C14):DT(D10) DA(C15):DT(D9) DA(C16):DT(D8) DC(C17):DG(D7) DA(C18):DT(D6) DA(C19):DT(D5) DT(C20):DA(D4) DG(C21):DC(D3) chainA ( 13) ARG176 0 0 0 0 0 3 9 12 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klravleklklsRddistaagmvkgvvdhlllrlkcdsafrgvgllntgsyyehvkisapnefdvmfklevpriqleeysntrayyfvkfkrnpkenplsqflegeilsaskmlskfrkiikeeindikdtdvimkrkrggspavtllisekisvditlalesksswpastqeglriqnwlsakvrkqlrlkpfylvpkhakegngfqeetwrlsfshiekeilnnhgksktccenkeekccrkdclklmkylleqlkerfkdkkhldkfssyhvktaffhvctqnpqdsqwdrkdlglcfdncvtyflqclrteklenyfipefnlfssnlidkrskefltkqieyernnefpvfd >6edb_AB: title=CRYSTAL STRUCTURE OF SRY.HCGAS-21BP DSDNA COMPLEX organism=HOMO SAPIENS DNA sequence DC(D3):DG(C21) DA(D4):DT(C20) DT(D5):DA(C19) DT(D6):DA(C18) DG(D7):DC(C17) DT(D8):DA(C16) DT(D9):DA(C15) DT(D10):DA(C14) DA(D11):DT(C13) DG(D12):DC(C12) DA(D13):DT(C11) DT(D14):DA(C10) DC(D15):DG(C9) DC(D16):DG(C8) DC(D17):DG(C7) DG(D18):DC(C6) DG(D19):DC(C5) DA(D20):DT(C4) DT(D21):DA(C3) DC(D22):DG(C2) chainA ( 13) ARG176 0 0 0 0 0 0 0 0 0 0 0 0 12 9 3 0 0 0 0 0 chainB ( 2) ARG7 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ASN10 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) PHE12 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ILE13 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG20 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ASN32 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER36 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klravleklklsRddistaagmvkgvvdhlllrlkcdsafrgvgllntgsyyehvkisapnefdvmfklevpriqleeysntrayyfvkfkrnpkenplsqflegeilsaskmlskfrkiikeeindikdtdvimkrkrggspavtllisekisvditlalesksswpastqeglriqnwlsakvrkqlrlkpfylvpkhakegngfqeetwrlsfshiekeilnnhgksktccenkeekccrkdclklmkylleqlkerfkdkkhldkfssyhvktaffhvctqnpqdsqwdrkdlglcfdncvtyflqclrteklenyfipefnlfssnlidkrskefltkqieyernnefpvfd/kRpmNaFIvwsrdqRrkmalenprmrNseiSkqlgyqwkmlteaekwpffqeaqklqamhrekypny >6edc_A: title=HCGAS-16BP DSDNA COMPLEX organism=Homo sapiens DNA sequence DT(C2):DA(B17) DT(C3):DA(B16) DC(C4):DG(B15) DG(C5):DC(B14) DT(C6):DA(B13) DC(C7):DG(B12) DT(C8):DA(B11) DT(C9):DA(B10) DC(C10):DG(B9) DG(C11):DC(B8) DG(C12):DC(B7) DC(C13):DG(B6) DA(C14):DT(B5) DA(C15):DT(B4) DT(C16):DA(B3) chainA ( 16) ARG176 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 prot.sequence gasklravleklklsRddistaagmvkgvvdhlllrlkcdsafrgvgllntgsyyehvkisapnefdvmfklevpriqleeysntrayyfvkfknplsqflegeilsaskmlskfrkiikeeindidvimeaerggspavtllisekisvditlalesksswpastqeglriqnwlsakvrkqlrlkpfylvpkhaqeetwrlsfshiekeilnnhgksktccenkeekccrkdclklmkylleqlkerfkdkkhldkfssyhvktaffhvctqnpqdsqwdrkdlglcfdncvtyflqclrteklenyfipefnlfssnlidkrskefltkqieyernnefpvfde >6edt_CDFJM: title=MYCOBACTERIUM TUBERCULOSIS RNAP OPEN PROMOTER COMPLEX WITH RBPA/CARD AND AP3 PROMOTER organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DC(P77):DG(O78) DG(P78):DC(O77) DC(P79):DG(O76) DC(P80):DG(O75) DC(P81):DG(O74) DG(P82):DC(O73) DC(P83):DG(O72) DT(P84):DA(O71) DT(P85):DA(O70) DC(P86):DG(O69) DG(P87):DC(O68) DG(P88):DC(O67) DG(P89):DC(O66) DG(P90):DC(O65) DC(P91):DG(O64) DA(P92):DT(O63) DA(P93):DT(O62) DC(P94):DG(O61) DC(P95):DG(O60) DC(P96):DG(O59) DT(P97):DA(O58) DG(P98):DC(O57) DC(P99):DG(O56) DC(P100):DG(O55) DA(P101):DT(O54) DG(P102):DC(O53) DT(P103):DA(O52) DC(P104):DG(O51) DT(P105):DA(O50) DA(P106):DT(O49) DA(P107):DT(O48) DT(P108):DA(O47) DA(P109):DT(O46) DC(P110):DG(O45) DA(P111):DT(O44) DA(P112):DT(O43) DA(P113):DT(O42) DT(P114):DA(O41) DC(P115):DG(O40) DC(P116):DG(O39) DG(P117):DC(O38) DG(P118):DC(O37) DC(P119):DG(O36) DA(P120):DT(O35) DA(P121):DT(O34) DT(P122):DA(O33) DG(P123):DC(O32) DG(P124):DC(O31) DA(P125):DT(O30) DG(P126):DC(O29) DT(P127):DA(O28) DC(P128):DG(O27) DA(P129):DT(O26) DA(P130):DT(O25) DG(P131):DC(O24) DA(P132):DT(O23) DC(P133):DG(O22) DC(P134):DG(O21) DA(P135):DT(O20) DG(P136):DC(O19) DG(P137):DC(O18) DT(P138):DA(O17) DT(P139):DA(O16) DC(P140):DG(O15) DG(P141):DC(O14) chainC (152) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1033) GLN1062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (332) LEU330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) ASP331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) PRO394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (504) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (869) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (870) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ASP226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) VAL228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LEU240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ASN299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) LEU302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) ARG313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ASP336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) SER344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) THR345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) TYR346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) THR348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) TRP349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) TRP350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) VAL370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) HIS371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ARG381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ARG384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) GLU385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) ILE421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) GLN425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ILE427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) GLU430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) ASP432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) SER433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) PHE438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) THR499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 (295) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 17 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) GLU501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 8 4 0 0 0 0 0 0 0 0 0 0 0 (297) ARG502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 0 0 0 (299) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) GLN505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 chainJ ( 4) LEU6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 84) TRP85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) SER86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) TYR89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklRpgepptkesaqtllenlffkekRydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtliniRpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpggLsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaQfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlss/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLDggRfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgPgnRplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrtditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/edesealrqarkdaeltasaDsVRayLkqigkvaLlnaeeEvelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleaNlRLvvslakrytgRgmafldliqegnlgliravekFDytKgYkfSTYaTWWirQaitramadqartiripVHmvEvinklgRiqREllqdlgreptpeelakemditpekvleiqqyarEpISldQtIgdEgDSqlgdFiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyl/drvLrgsrlgavsyetdrnhdlaprqiaryrtdngeefevpfaddaeipgtwlcrngmegtliegdlpepkkvkpprthwdmllerrsieeleellkerlelirsrrrg/ifkvgdtvvyphhgaalveaietrtikgeqkeylvlkvaqgdltvrvpaenaeyvgvrdvvgqegldkvfqvlraphteeptnWSrrYKanleklasgdvnkvaevvrdlwrrdqerglsagekrmlakarqilvgelalaestddakaetildevlaa >6edt_J: title=MYCOBACTERIUM TUBERCULOSIS RNAP OPEN PROMOTER COMPLEX WITH RBPA/CARD AND AP3 PROMOTER organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DC(P77):DG(O78) DG(P78):DC(O77) DC(P79):DG(O76) DC(P80):DG(O75) DC(P81):DG(O74) DG(P82):DC(O73) DC(P83):DG(O72) DT(P84):DA(O71) DT(P85):DA(O70) DC(P86):DG(O69) DG(P87):DC(O68) DG(P88):DC(O67) DG(P89):DC(O66) DG(P90):DC(O65) DC(P91):DG(O64) DA(P92):DT(O63) DA(P93):DT(O62) DC(P94):DG(O61) DC(P95):DG(O60) DC(P96):DG(O59) DT(P97):DA(O58) DG(P98):DC(O57) DC(P99):DG(O56) DC(P100):DG(O55) DA(P101):DT(O54) DG(P102):DC(O53) DT(P103):DA(O52) DC(P104):DG(O51) DT(P105):DA(O50) DA(P106):DT(O49) DA(P107):DT(O48) DT(P108):DA(O47) DA(P109):DT(O46) DC(P110):DG(O45) DA(P111):DT(O44) DA(P112):DT(O43) DA(P113):DT(O42) DT(P114):DA(O41) DC(P115):DG(O40) DC(P116):DG(O39) DG(P117):DC(O38) DG(P118):DC(O37) DC(P119):DG(O36) DA(P120):DT(O35) DA(P121):DT(O34) DT(P122):DA(O33) DG(P123):DC(O32) DG(P124):DC(O31) DA(P125):DT(O30) DG(P126):DC(O29) DT(P127):DA(O28) DC(P128):DG(O27) DA(P129):DT(O26) DA(P130):DT(O25) DG(P131):DC(O24) DA(P132):DT(O23) DC(P133):DG(O22) DC(P134):DG(O21) DA(P135):DT(O20) DG(P136):DC(O19) DG(P137):DC(O18) DT(P138):DA(O17) DT(P139):DA(O16) DC(P140):DG(O15) DG(P141):DC(O14) chainJ ( 4) LEU6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence drvLrgsrlgavsyetdrnhdlaprqiaryrtdngeefevpfaddaeipgtwlcrngmegtliegdlpepkkvkpprthwdmllerrsieeleellkerlelirsrrrg >6ee8_CDFM: title=MYCOBACTERIUM TUBERCULOSIS RNAP PROMOTER UNWINDING INTERMEDIATE COMPLEX WITH RBPA/CARD AND AP3 PROMOTER organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DC(P77):DG(O78) DG(P78):DC(O77) DC(P79):DG(O76) DC(P80):DG(O75) DC(P81):DG(O74) DG(P82):DC(O73) DC(P83):DG(O72) DT(P84):DA(O71) DT(P85):DA(O70) DC(P86):DG(O69) DG(P87):DC(O68) DG(P88):DC(O67) DG(P89):DC(O66) DG(P90):DC(O65) DC(P91):DG(O64) DA(P92):DT(O63) DA(P93):DT(O62) DC(P94):DG(O61) DC(P95):DG(O60) DC(P96):DG(O59) DT(P97):DA(O58) DG(P98):DC(O57) DC(P99):DG(O56) DT(P105):DG(O55) DA(P106):DT(O54) DA(P107):DT(O48) DT(P108):DA(O47) DA(P109):DT(O46) DC(P110):DG(O45) DA(P111):DT(O44) DA(P112):DT(O43) DA(P113):DT(O42) DT(P114):DA(O41) DC(P115):DG(O40) DC(P116):DG(O39) DG(P117):DC(O38) DG(P118):DC(O37) DC(P119):DG(O36) DA(P120):DT(O35) DA(P121):DT(O34) DT(P122):DA(O33) DG(P123):DC(O32) DG(P124):DC(O31) DA(P125):DT(O30) DG(P126):DC(O29) DT(P127):DA(O28) DC(P128):DG(O27) DA(P129):DT(O26) DA(P130):DT(O25) DG(P131):DC(O24) DA(P132):DT(O23) DC(P133):DG(O22) DC(P134):DG(O21) DA(P135):DT(O20) DG(P136):DC(O19) DG(P137):DC(O18) DT(P138):DA(O17) DT(P139):DA(O16) DC(P140):DG(O15) DG(P141):DC(O14) chainC (366) ARG395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (398) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 18) ASP226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LEU232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) LEU302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) SER344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) TRP350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) GLN353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ARG357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) VAL370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) HIS371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) THR499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 (292) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 16 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) GLU501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 13 13 1 0 0 0 0 0 0 0 0 0 0 0 (294) ARG502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 (296) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 2 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 chainM ( 89) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsRmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlss/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgNrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmtgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/sealrqarkdaeltasaDsVRayLkqigkvaLlnaeeEvelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleaNlRLvvslakrytgrgmafldliqegnlgliravekfdytkgykfStyatwWiRQaitRamadqartiripVHmvEvinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyl/ifkvgdtvvyphhgaalveaietrtikgeqkeylvlkvaqgdltvrvpaenaeyvgvrdvvgqegldkvfqvlraphteeptnwsrryKanleklasgdvnkvaevvrdlwrrdqerglsagekrmlakarqilvgelalaestddakaetildevlaa >6ee8_M:CarD-like; title=MYCOBACTERIUM TUBERCULOSIS RNAP PROMOTER UNWINDING INTERMEDIATE COMPLEX WITH RBPA/CARD AND AP3 PROMOTER organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DC(P77):DG(O78) DG(P78):DC(O77) DC(P79):DG(O76) DC(P80):DG(O75) DC(P81):DG(O74) DG(P82):DC(O73) DC(P83):DG(O72) DT(P84):DA(O71) DT(P85):DA(O70) DC(P86):DG(O69) DG(P87):DC(O68) DG(P88):DC(O67) DG(P89):DC(O66) DG(P90):DC(O65) DC(P91):DG(O64) DA(P92):DT(O63) DA(P93):DT(O62) DC(P94):DG(O61) DC(P95):DG(O60) DC(P96):DG(O59) DT(P97):DA(O58) DG(P98):DC(O57) DC(P99):DG(O56) DT(P105):DG(O55) DA(P106):DT(O54) DA(P107):DT(O48) DT(P108):DA(O47) DA(P109):DT(O46) DC(P110):DG(O45) DA(P111):DT(O44) DA(P112):DT(O43) DA(P113):DT(O42) DT(P114):DA(O41) DC(P115):DG(O40) DC(P116):DG(O39) DG(P117):DC(O38) DG(P118):DC(O37) DC(P119):DG(O36) DA(P120):DT(O35) DA(P121):DT(O34) DT(P122):DA(O33) DG(P123):DC(O32) DG(P124):DC(O31) DA(P125):DT(O30) DG(P126):DC(O29) DT(P127):DA(O28) DC(P128):DG(O27) DA(P129):DT(O26) DA(P130):DT(O25) DG(P131):DC(O24) DA(P132):DT(O23) DC(P133):DG(O22) DC(P134):DG(O21) DA(P135):DT(O20) DG(P136):DC(O19) DG(P137):DC(O18) DT(P138):DA(O17) DT(P139):DA(O16) DC(P140):DG(O15) DG(P141):DC(O14) chainM ( 89) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ifkvgdtvvyphhgaalveaietrtikgeqkeylvlkvaqgdltvrvpaenaeyvgvrdvvgqegldkvfqvlraphteeptnwsrryKanleklasgdvnkvaevvrdlwrrdqerglsagekrmlakarqilvgelalaestddakaetildevlaa >6eec_CDFM: title=MYCOBACTERIUM TUBERCULOSIS RNAP PROMOTER UNWINDING INTERMEDIATE COMPLEX WITH RBPA/CARD AND AP3 PROMOTER CAPTURED BY CORALLOPYRONIN organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DC(P77):DG(O78) DG(P78):DC(O77) DC(P79):DG(O76) DC(P80):DG(O75) DC(P81):DG(O74) DG(P82):DC(O73) DC(P83):DG(O72) DT(P84):DA(O71) DT(P85):DA(O70) DC(P86):DG(O69) DG(P87):DC(O68) DG(P88):DC(O67) DG(P89):DC(O66) DG(P90):DC(O65) DC(P91):DG(O64) DA(P92):DT(O63) DA(P93):DT(O62) DC(P94):DG(O61) DC(P95):DG(O60) DC(P96):DG(O59) DT(P97):DA(O58) DG(P98):DC(O57) DC(P99):DT(O54) DG(P102):DC(O53) DT(P103):DA(O52) DC(P104):DG(O51) DT(P105):DA(O50) DA(P106):DT(O49) DA(P107):DT(O48) DT(P108):DA(O47) DA(P109):DT(O46) DC(P110):DG(O45) DA(P111):DT(O44) DA(P112):DT(O43) DA(P113):DT(O42) DT(P114):DA(O41) DC(P115):DG(O40) DC(P116):DG(O39) DG(P117):DC(O38) DG(P118):DC(O37) DC(P119):DG(O36) DA(P120):DT(O35) DA(P121):DT(O34) DT(P122):DA(O33) DG(P123):DC(O32) DG(P124):DC(O31) DA(P125):DT(O30) DG(P126):DC(O29) DT(P127):DA(O28) DC(P128):DG(O27) DA(P129):DT(O26) DA(P130):DT(O25) DG(P131):DC(O24) DA(P132):DT(O23) DC(P133):DG(O22) DC(P134):DG(O21) DA(P135):DT(O20) DG(P136):DC(O19) DG(P137):DC(O18) DT(P138):DA(O17) DT(P139):DA(O16) DC(P140):DG(O15) DG(P141):DC(O14) chainC (369) ARG398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (391) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (398) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) ARG412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 18) ASP226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) LEU302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ARG309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) PHE335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ASP336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) SER344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) THR345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) TYR346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) THR348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) TRP349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) TRP350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) GLN353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ARG357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) VAL370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) HIS371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ARG384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) THR499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 (292) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) GLU501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 13 5 1 0 0 0 0 0 0 0 0 0 0 0 (294) ARG502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 0 0 0 (296) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 2 0 0 0 0 0 0 0 0 0 chainM ( 84) TRP85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) SER86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmeRvvrErmttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlss/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvtgpgNrplkslsdllkgkqgRfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmtgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/sealrqarkdaeltasaDsvraylkqigkvaLlnaeeEvelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleaNlRLvvslakRytgrgmafldliqegnlgliravekFDytKgYkfSTYaTWWiRQaitRamadqartiripVHmvEvinklgRiqRellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyl/ifkvgdtvvyphhgaalveaietrtikgeqkeylvlkvaqgdltvrvpaenaeyvgvrdvvgqegldkvfqvlraphteeptnWSrryKanleklasgdvnkvaevvrdlwrrdqerglsagekrmlakarqilvgelalaestddakaetildevlaa >6eec_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=MYCOBACTERIUM TUBERCULOSIS RNAP PROMOTER UNWINDING INTERMEDIATE COMPLEX WITH RBPA/CARD AND AP3 PROMOTER CAPTURED BY CORALLOPYRONIN organism=? DNA sequence DC(O14):DG(P141) DG(O15):DC(P140) DA(O16):DT(P139) DA(O17):DT(P138) DC(O18):DG(P137) DC(O19):DG(P136) DT(O20):DA(P135) DG(O21):DC(P134) DG(O22):DC(P133) DT(O23):DA(P132) DC(O24):DG(P131) DT(O25):DA(P130) DT(O26):DA(P129) DG(O27):DC(P128) DA(O28):DT(P127) DC(O29):DG(P126) DT(O30):DA(P125) DC(O31):DG(P124) DC(O32):DG(P123) DA(O33):DT(P122) DT(O34):DA(P121) DT(O35):DA(P120) DG(O36):DC(P119) DC(O37):DG(P118) DC(O38):DG(P117) DG(O39):DC(P116) DG(O40):DC(P115) DA(O41):DT(P114) DT(O42):DA(P113) DT(O43):DA(P112) DT(O44):DA(P111) DG(O45):DC(P110) DT(O46):DA(P109) DA(O47):DT(P108) DT(O48):DA(P107) DT(O49):DA(P106) DA(O50):DT(P105) DG(O51):DC(P104) DA(O52):DT(P103) DC(O53):DG(P102) DG(O56):DC(P99) DC(O57):DG(P98) DA(O58):DT(P97) DG(O59):DC(P96) DG(O60):DC(P95) DG(O61):DC(P94) DT(O62):DA(P93) DT(O63):DA(P92) DG(O64):DC(P91) DC(O65):DG(P90) DC(O66):DG(P89) DC(O67):DG(P88) DC(O68):DG(P87) DG(O69):DC(P86) DA(O70):DT(P85) DA(O71):DT(P84) DG(O72):DC(P83) DC(O73):DG(P82) DG(O74):DC(P81) DG(O75):DC(P80) DG(O76):DC(P79) DC(O77):DG(P78) DG(O78):DC(P77) chainF ( 18) ASP226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LEU232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ARG309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) PHE335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ASP336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) SER344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) THR345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) TYR346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) THR348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) TRP349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) TRP350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) GLN353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ARG357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) VAL370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) HIS371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ARG384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) THR499 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) GLU501 0 0 0 0 0 0 0 0 0 0 0 1 5 13 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) ARG502 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN505 0 0 0 0 0 0 0 0 0 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sealrqarkdaeltasaDsVRayLkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakRytgrgmafldliqegnlgliravekFDytKgYkfSTYaTWWiRQaitRamadqartiripVHmvEvinklgRiqRellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyl >6eko_A: title=CRYSTAL STRUCTURE OF TYPE IIP RESTRICTION ENDONUCLEASE PFOI WITH COGNATE DNA organism=Pseudomonas fluorescens DNA sequence DC(F1):DG(E13) DG(F2):DC(E12) DC(F3):DG(E11) DT(F4):DA(E10) DC(F5):DG(E9) DC(F6):DG(E8) DG(F8):DC(E6) DG(F9):DC(E5) DA(F10):DT(E4) DG(F11):DC(E3) DC(F12):DG(E2) DG(F13):DC(E1) chainA (100) ARG100 0 0 0 0 0 37 1 0 0 0 0 0 (105) GLN105 0 0 0 0 30 11 0 0 0 0 0 0 (108) ALA108 0 0 0 0 1 3 0 0 0 0 0 0 (109) LYS109 0 0 9 12 6 0 0 0 0 0 0 0 (188) ARG189 0 0 0 0 0 5 14 0 0 0 0 0 (190) LYS191 0 0 0 0 0 0 11 12 3 0 0 0 (191) GLU192 0 0 0 0 0 0 5 12 5 0 0 0 (192) VAL193 0 0 0 0 0 0 2 0 0 0 0 0 (238) ILE239 0 0 0 0 0 0 1 0 0 0 0 0 (246) GLN247 0 0 0 0 0 0 0 4 11 4 0 0 (256) ARG257 0 0 0 0 0 0 0 0 1 4 0 0 prot.sequence mqkyrlyekdgspvqdfnrfvkgwldiefglkehqppkvfdtirdkyneaieavvlsgvaprtahkaalstltellfghdlakelsarldiqpigvggfRsahsQafAKnvgenfvnlmvyalacilkdnddvlvdkglpphlkkaltlsrecrikdtlreikipiegdlcvfsrsnhnaivisaatRlKEVfhigtmwalfsdvakdeyclnkwglkvesseslkdtmyvfatadmInkdgarsQgcdveretpRnliamdasffdyvfvskmgighvssdlslkygreslfhelgciidmieqkfdill >6eko_AB: title=CRYSTAL STRUCTURE OF TYPE IIP RESTRICTION ENDONUCLEASE PFOI WITH COGNATE DNA organism=Pseudomonas fluorescens DNA sequence DC(E1):DG(F13) DG(E2):DC(F12) DC(E3):DG(F11) DT(E4):DA(F10) DC(E5):DG(F9) DC(E6):DG(F8) DG(E8):DC(F6) DG(E9):DC(F5) DA(E10):DT(F4) DG(E11):DC(F3) DC(E12):DG(F2) DG(E13):DC(F1) chainA (100) ARG100 0 0 0 0 0 1 37 0 0 0 0 0 (105) GLN105 0 0 0 0 0 0 11 30 0 0 0 0 (108) ALA108 0 0 0 0 0 0 3 1 0 0 0 0 (109) LYS109 0 0 0 0 0 0 0 6 12 9 0 0 (188) ARG189 0 0 0 0 0 14 5 0 0 0 0 0 (190) LYS191 0 0 0 3 12 11 0 0 0 0 0 0 (191) GLU192 0 0 0 5 12 5 0 0 0 0 0 0 (192) VAL193 0 0 0 0 0 2 0 0 0 0 0 0 (238) ILE239 0 0 0 0 0 1 0 0 0 0 0 0 (246) GLN247 0 0 4 11 4 0 0 0 0 0 0 0 (256) ARG257 0 0 4 1 0 0 0 0 0 0 0 0 chainB (100) ARG100 0 0 0 0 0 35 1 0 0 0 0 0 (105) GLN105 0 0 0 0 30 11 0 0 0 0 0 0 (108) ALA108 0 0 0 0 1 3 0 0 0 0 0 0 (109) LYS109 0 0 7 10 4 0 0 0 0 0 0 0 (188) ARG189 0 0 0 0 0 6 14 0 0 0 0 0 (190) LYS191 0 0 0 0 0 0 10 9 5 0 0 0 (191) GLU192 0 0 0 0 0 0 5 10 5 0 0 0 (192) VAL193 0 0 0 0 0 0 2 0 0 0 0 0 (238) ILE239 0 0 0 0 0 0 1 0 0 0 0 0 (246) GLN247 0 0 0 0 0 0 0 7 13 4 0 0 (256) ARG257 0 0 0 0 0 0 0 0 1 4 0 0 prot.sequence mqkyrlyekdgspvqdfnrfvkgwldiefglkehqppkvfdtirdkyneaieavvlsgvaprtahkaalstltellfghdlakelsarldiqpigvggfRsahsQafAKnvgenfvnlmvyalacilkdnddvlvdkglpphlkkaltlsrecrikdtlreikipiegdlcvfsrsnhnaivisaatRlKEVfhigtmwalfsdvakdeyclnkwglkvesseslkdtmyvfatadmInkdgarsQgcdveretpRnliamdasffdyvfvskmgighvssdlslkygreslfhelgciidmieqkfdill/mqkyrlyekdgspvqdfnrfvkgwldiefglkehqppkvfdtirdkyneaieavvlsgvaprtahkaalstltellfghdlakelsarldiqpigvggfRsahsQafAKnvgenfvnlmvyalacilkdnddvlvdkglpphlkkaltlsrecrikdtlreikipiegdlcvfsrsnhnaivisaatRlKEVfhigtmwalfsdvakdeyclnkwglkvesseslkdtmyvfatadmInkdgarsQgcdveretpRnliamdasffdyvfvskmgighvssdlslkygreslfhelgciidmieqkfdill >6el8_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE FORKHEAD DOMAIN OF HUMAN FOXN1 IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(B4):DC(C13) DG(B5):DC(C12) DT(B6):DA(C11) DG(B7):DC(C10) DG(B8):DC(C9) DC(B9):DG(C8) DG(B10):DC(C7) DT(B11):DA(C6) DC(B12):DG(C5) DT(B13):DA(C4) DT(B14):DA(C3) DC(B15):DG(C2) DA(B16):DT(C1) chainA ( 49) ASN317 0 0 0 0 2 9 3 0 0 0 0 0 0 ( 50) SER318 0 0 0 0 0 0 4 2 0 0 0 0 0 ( 52) ARG320 0 0 0 19 17 5 0 0 0 0 0 0 0 ( 53) HIS321 0 0 0 0 0 2 17 13 6 0 0 0 0 ( 56) SER324 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence mpkpiysysilifmalknsktgslpvseiynfmtehfpyfktapdgwkNSvRHnlSlnkcfekvenkskgclwalnpakidkmqeelqk >6emz_AB:DNA_breaking-rejoining_enzymes; title=STRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397, R225K) IN COMPLEX WITH CIRCULAR INTERMEDIATE DNA (CI5-DNA) organism=Enterococcus faecalis DNA sequence DT(E-14):DA(C18) DC(E-13):DG(C17) DC(E-12):DG(C16) DC(E-11):DG(C15) DA(E-10):DT(C14) DT(E-9):DA(C13) DA(E-8):DT(C12) DT(E-7):DA(C11) DA(E-6):DT(C10) DA(E-5):DT(C9) DT(E-4):DA(C8) DT(E-3):DA(C7) DT(E-2):DA(C6) DT(E-1):DA(C5) DC(E1):DG(C3) DT(E2):DA(C2) DA(E3):DT(C1) DT(E4):DA(C0) DA(E5):DT(C-1) DA(E6):DT(C-2) DA(E7):DT(C-3) DA(E8):DT(C-4) DT(E9):DA(C-5) DT(E10):DA(C-6) DT(E11):DA(C-7) DT(E12):DA(C-8) DA(E13):DT(C-9) DG(E14):DC(C-10) DG(E15):DC(C-11) DT(E16):DA(C-12) DT(E17):DA(C-13) DA(E18):DT(C-14) DT(E19):DA(C-15) chainA ( 21) ASN101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 ( 22) THR102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 ( 66) LYS146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) SER154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 (235) ALA315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (236) VAL316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 2 0 0 0 0 0 0 (237) ASP317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (244) ARG324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (292) ASN372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) MET375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ASN101 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR102 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG108 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) LYS146 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR147 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN150 0 0 0 0 0 0 0 0 0 0 0 5 8 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 32 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) SER154 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR254 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) ALA315 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) VAL316 0 0 0 0 0 2 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ASP317 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG324 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ASN372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlKaafYtaiqddcirkNpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktqsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsNitMtlnyyahatfdsaraemerla/smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlkaafYtaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktqsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsNitmtlnyyahatfdsaraemerla >6emz_B:DNA_breaking-rejoining_enzymes; title=STRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397, R225K) IN COMPLEX WITH CIRCULAR INTERMEDIATE DNA (CI5-DNA) organism=Enterococcus faecalis DNA sequence DT(E-14):DA(C18) DC(E-13):DG(C17) DC(E-12):DG(C16) DC(E-11):DG(C15) DA(E-10):DT(C14) DT(E-9):DA(C13) DA(E-8):DT(C12) DT(E-7):DA(C11) DA(E-6):DT(C10) DA(E-5):DT(C9) DT(E-4):DA(C8) DT(E-3):DA(C7) DT(E-2):DA(C6) DT(E-1):DA(C5) DC(E1):DG(C3) DT(E2):DA(C2) DA(E3):DT(C1) DT(E4):DA(C0) DA(E5):DT(C-1) DA(E6):DT(C-2) DA(E7):DT(C-3) DA(E8):DT(C-4) DT(E9):DA(C-5) DT(E10):DA(C-6) DT(E11):DA(C-7) DT(E12):DA(C-8) DA(E13):DT(C-9) DG(E14):DC(C-10) DG(E15):DC(C-11) DT(E16):DA(C-12) DT(E17):DA(C-13) DA(E18):DT(C-14) DT(E19):DA(C-15) chainB ( 21) ASN101 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR102 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG108 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) LYS146 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR147 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN150 0 0 0 0 0 0 0 0 0 0 0 5 8 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 32 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) SER154 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR254 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) ALA315 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) VAL316 0 0 0 0 0 2 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ASP317 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG324 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ASN372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlkaafYtaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktqsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsNitmtlnyyahatfdsaraemerla >6en0_A:DNA_breaking-rejoining_enzymes; title=STRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397) IN COMPLEX WITH CIRCULAR INTERMEDIATE DNA (CI5-DNA) organism=Enterococcus faecalis DNA sequence DT(C-14):DA(E18) DA(C-13):DT(E17) DA(C-12):DT(E16) DC(C-11):DG(E15) DC(C-10):DG(E14) DT(C-9):DA(E13) DA(C-8):DT(E12) DA(C-7):DT(E11) DA(C-6):DT(E10) DA(C-5):DT(E9) DT(C-4):DA(E8) DT(C-3):DA(E7) DT(C-2):DA(E6) DT(C-1):DA(E5) DA(C0):DT(E4) DT(C1):DA(E3) DC(C4):DG(E0) DA(C5):DT(E-1) DA(C6):DT(E-2) DA(C7):DT(E-3) DA(C8):DT(E-4) DT(C9):DA(E-5) DT(C10):DA(E-6) DA(C11):DT(E-7) DT(C12):DA(E-8) DA(C13):DT(E-9) DT(C14):DA(E-10) DG(C15):DC(E-11) DG(C16):DC(E-12) DG(C17):DC(E-13) chainA ( 21) ASN101 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR102 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG108 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) LYS146 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR147 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN150 0 0 0 0 0 0 0 0 0 0 0 7 6 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 68 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) SER154 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR254 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) ALA315 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) VAL316 0 0 0 0 0 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) ASP317 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlKaafYtaiqddcirkNpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglriselcgltdkdldfenrviivshqllrnTgvgyyidvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgrlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsnitmtlnyyahatfdsaraemer >6en0_AB:DNA_breaking-rejoining_enzymes; title=STRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397) IN COMPLEX WITH CIRCULAR INTERMEDIATE DNA (CI5-DNA) organism=Enterococcus faecalis DNA sequence DC(E-13):DG(C17) DC(E-12):DG(C16) DC(E-11):DG(C15) DA(E-10):DT(C14) DT(E-9):DA(C13) DA(E-8):DT(C12) DT(E-7):DA(C11) DA(E-6):DT(C10) DA(E-5):DT(C9) DT(E-4):DA(C8) DT(E-3):DA(C7) DT(E-2):DA(C6) DT(E-1):DA(C5) DG(E0):DC(C4) DA(E3):DT(C1) DT(E4):DA(C0) DA(E5):DT(C-1) DA(E6):DT(C-2) DA(E7):DT(C-3) DA(E8):DT(C-4) DT(E9):DA(C-5) DT(E10):DA(C-6) DT(E11):DA(C-7) DT(E12):DA(C-8) DA(E13):DT(C-9) DG(E14):DC(C-10) DG(E15):DC(C-11) DT(E16):DA(C-12) DT(E17):DA(C-13) DA(E18):DT(C-14) chainA ( 21) ASN101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 ( 22) THR102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 ( 66) LYS146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 ( 70) ASN150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 7 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 34 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) SER154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR160 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (228) ALA315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (229) VAL316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 2 0 0 0 0 0 (230) ASP317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB ( 20) ASN101 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) THR102 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG108 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) LYS146 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR147 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ASN150 0 0 0 0 0 0 0 0 0 0 6 10 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 66 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) TYR160 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) THR254 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) ALA315 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) VAL316 0 0 0 0 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) ASP317 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) ARG324 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlKaafYtaiqddcirkNpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglriselcgltdkdldfenrviivshqllrnTgvgyyidvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgrlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsnitmtlnyyahatfdsaraemer/mtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidslsdakewalrmkekglsyKTinNdkRslKaafYtaiqdrknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglriselcgltdkdldfenrviivshqllrnTgvgyyidepktqsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsnitmtlnyyahatfdsaraemerla >6en1_A:DNA_breaking-rejoining_enzymes; title=STRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397, R225K) IN COMPLEX WITH A CIRCULAR INTERMEDIATE DNA (CI6A-DNA) organism=Enterococcus faecalis DNA sequence DC(C-17):DG(D22) DG(C-16):DC(D21) DA(C-15):DT(D20) DT(C-14):DA(D19) DA(C-13):DT(D18) DA(C-12):DT(D17) DC(C-11):DG(D16) DC(C-10):DG(D15) DT(C-9):DA(D14) DA(C-8):DT(D13) DA(C-7):DT(D12) DA(C-6):DT(D11) DA(C-5):DT(D10) DT(C-1):DA(D9) DT(C1):DA(D8) DT(C2):DA(D7) DT(C3):DA(D6) DT(C4):DA(D4) DC(C5):DG(D0) DA(C6):DT(D-1) DA(C7):DT(D-2) DA(C8):DT(D-3) DA(C9):DT(D-4) DT(C10):DA(D-5) DT(C11):DA(D-6) DA(C12):DT(D-7) DT(C13):DA(D-8) DA(C14):DT(D-9) DT(C15):DA(D-10) DG(C16):DC(D-11) DG(C17):DC(D-12) DG(C18):DC(D-13) DA(C19):DT(D-14) DT(C20):DA(D-15) DT(C21):DA(D-16) chainA ( 21) ASN101 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG108 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) SER154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR254 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) ALA315 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) VAL316 0 0 0 0 0 0 0 0 2 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ASP317 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG324 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ASN372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) MET375 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyktinNdkRSlkaafytaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktqsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsNitMtlnyyahatfdsaraemerla >6en1_AB:DNA_breaking-rejoining_enzymes; title=STRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397, R225K) IN COMPLEX WITH A CIRCULAR INTERMEDIATE DNA (CI6A-DNA) organism=Enterococcus faecalis DNA sequence DC(C-17):DG(D22) DG(C-16):DC(D21) DA(C-15):DT(D20) DT(C-14):DA(D19) DA(C-13):DT(D18) DA(C-12):DT(D17) DC(C-11):DG(D16) DC(C-10):DG(D15) DT(C-9):DA(D14) DA(C-8):DT(D13) DA(C-7):DT(D12) DA(C-6):DT(D11) DA(C-5):DT(D10) DT(C-1):DA(D9) DT(C1):DA(D8) DT(C2):DA(D7) DT(C3):DA(D6) DT(C4):DA(D4) DC(C5):DG(D0) DA(C6):DT(D-1) DA(C7):DT(D-2) DA(C8):DT(D-3) DA(C9):DT(D-4) DT(C10):DA(D-5) DT(C11):DA(D-6) DA(C12):DT(D-7) DT(C13):DA(D-8) DA(C14):DT(D-9) DT(C15):DA(D-10) DG(C16):DC(D-11) DG(C17):DC(D-12) DG(C18):DC(D-13) DA(C19):DT(D-14) DT(C20):DA(D-15) DT(C21):DA(D-16) chainA ( 21) ASN101 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG108 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) SER154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR254 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) ALA315 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) VAL316 0 0 0 0 0 0 0 0 2 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ASP317 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG324 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ASN372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) MET375 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ASN101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 66) LYS146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) SER154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 (235) ALA315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (236) VAL316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 1 2 0 0 0 0 0 0 0 (237) ASP317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (244) ARG324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (295) MET375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyktinNdkRSlkaafytaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktqsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsNitMtlnyyahatfdsaraemerla/smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlkaafYtaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktqsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsnitMtlnyyahatfdsaraemerla >6en2_A:DNA_breaking-rejoining_enzymes; title=STRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397, R225K) IN COMPLEX WITH A CIRCULAR INTERMEDIATE DNA (CI6B-DNA) organism=Enterococcus faecalis DNA sequence DA(D-16):DT(C21) DA(D-15):DT(C20) DT(D-14):DA(C19) DC(D-13):DG(C18) DC(D-12):DG(C17) DC(D-11):DG(C16) DA(D-10):DT(C15) DT(D-9):DA(C14) DA(D-8):DT(C13) DT(D-7):DA(C12) DA(D-6):DT(C11) DA(D-5):DT(C10) DT(D-4):DA(C9) DT(D-3):DA(C8) DT(D-2):DA(C7) DT(D-1):DA(C6) DA(D0):DT(C5) DA(D1):DT(C4) DG(D4):DC(C1) DG(D5):DC(C0) DA(D6):DT(C-1) DA(D7):DT(C-2) DA(D8):DT(C-3) DA(D9):DT(C-4) DT(D10):DA(C-5) DT(D11):DA(C-6) DT(D12):DA(C-7) DT(D13):DA(C-8) DA(D14):DT(C-9) DG(D15):DC(C-10) DG(D16):DC(C-11) DT(D17):DA(C-12) DT(D18):DA(C-13) DA(D19):DT(C-14) DT(D20):DA(C-15) DC(D21):DG(C-16) chainA ( 21) ASN101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 ( 66) LYS146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) SER154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (234) ALA315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (235) VAL316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 2 0 0 0 0 0 0 0 (236) ASP317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (243) ARG324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 prot.sequence smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlKaafYtaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsnitmtlnyyahatfdsaraemerl >6en2_AB:DNA_breaking-rejoining_enzymes; title=STRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397, R225K) IN COMPLEX WITH A CIRCULAR INTERMEDIATE DNA (CI6B-DNA) organism=Enterococcus faecalis DNA sequence DG(C-16):DC(D21) DA(C-15):DT(D20) DT(C-14):DA(D19) DA(C-13):DT(D18) DA(C-12):DT(D17) DC(C-11):DG(D16) DC(C-10):DG(D15) DT(C-9):DA(D14) DA(C-8):DT(D13) DA(C-7):DT(D12) DA(C-6):DT(D11) DA(C-5):DT(D10) DT(C-4):DA(D9) DT(C-3):DA(D8) DT(C-2):DA(D7) DT(C-1):DA(D6) DC(C0):DG(D4) DC(C1):DG(D3) DT(C4):DA(D1) DT(C5):DA(D0) DA(C6):DT(D-1) DA(C7):DT(D-2) DA(C8):DT(D-3) DA(C9):DT(D-4) DT(C10):DA(D-5) DT(C11):DA(D-6) DA(C12):DT(D-7) DT(C13):DA(D-8) DA(C14):DT(D-9) DT(C15):DA(D-10) DG(C16):DC(D-11) DG(C17):DC(D-12) DG(C18):DC(D-13) DA(C19):DT(D-14) DT(C20):DA(D-15) DT(C21):DA(D-16) chainA ( 21) ASN101 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR102 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG108 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) LYS146 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR147 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN150 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) SER154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR254 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) ALA315 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) VAL316 0 0 0 0 0 0 0 2 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) ASP317 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ARG324 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ASN101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 66) LYS146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) SER154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (234) ALA315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (235) VAL316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 1 2 0 0 0 0 0 0 0 (236) ASP317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (243) ARG324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 prot.sequence smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlkaafytaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsnitmtlnyyahatfdsaraemerl/smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlKaafYtaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsnitmtlnyyahatfdsaraemerl >6en8_ABE:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=SAFADR IN COMPLEX WITH DSDNA organism=Sulfolobus acidocaldarius DNA sequence DC(X1):DG(Y21) DT(X2):DA(Y20) DA(X3):DT(Y19) DC(X4):DG(Y18) DT(X5):DA(Y17) DT(X6):DA(Y16) DG(X7):DC(Y15) DA(X8):DT(Y14) DT(X9):DA(Y13) DT(X10):DA(Y12) DT(X11):DA(Y11) DT(X12):DA(Y10) DT(X13):DA(Y9) DG(X14):DC(Y8) DA(X15):DT(Y7) DG(X16):DC(Y6) DT(X17):DA(Y5) DC(X18):DG(Y4) DG(X19):DC(Y3) DA(X20):DT(Y2) DC(X21):DG(Y1) chainA ( 41) ALA46 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR47 0 0 0 0 0 0 2 5 16 4 0 0 0 0 0 0 0 0 0 0 0 ( 44) LEU49 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) TYR51 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) PHE52 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 34) ALA46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 ( 35) TYR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 16 5 2 0 0 0 ( 37) LEU49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 39) TYR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 ( 40) PHE52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 chainE ( 43) ALA46 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 44) TYR47 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 11 2 0 0 0 0 ( 46) LEU49 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 ( 48) TYR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 ( 49) PHE52 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 prot.sequence pktekgkeslnkildasveliadkgflstsinditskagvAYgLfYFyfkskhdildeiirqfnrnmryylktytqnldsridvekvgmkkflewmnenkkyykifietqvhrpdiykwhfmklaeryttglseamrrgeiinvdpellsyvligiahmlgkryvlwsnsgltlkqqrdldliienmltpr/keslnkildsveliadkgflstsinditskagvAYgLfYFyfkskhdildeiirqfnrnmryylktytqnldsridvekvgmkkflewmnenkkyykifietqvhrpdiykwhfmklaeryttglseamrrgeiinvdpellsyvligiahmlgkryvlwsnsgltlkqqrdldliienmltpr/rapktekgkeslnkildasveliadkgflstsinditskagvAYgLfYFyfkskhdildeiirqfnrnmryylktytqnldsridvekvgmkkflewmnenkkyykifietqvhrpdiykwhfmklaeryttglseamrrgeiinpellsyvligiahmlgkryvlwsnsgltlkqqrdldliienmltpr >6en8_C:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=SAFADR IN COMPLEX WITH DSDNA organism=Sulfolobus acidocaldarius DNA sequence DC(Z1):DG(Q21) DT(Z2):DA(Q20) DA(Z3):DT(Q19) DC(Z4):DG(Q18) DT(Z5):DA(Q17) DT(Z6):DA(Q16) DG(Z7):DC(Q15) DA(Z8):DT(Q14) DT(Z9):DA(Q13) DT(Z10):DA(Q12) DT(Z11):DA(Q11) DT(Z12):DA(Q10) DT(Z13):DA(Q9) DG(Z14):DC(Q8) DA(Z15):DT(Q7) DG(Z16):DC(Q6) DT(Z17):DA(Q5) DC(Z18):DG(Q4) DG(Z19):DC(Q3) DA(Z20):DT(Q2) DC(Z21):DG(Q1) chainC ( 41) ALA46 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR47 0 0 0 0 0 0 2 9 15 4 0 0 0 0 0 0 0 0 0 0 0 ( 44) LEU49 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) TYR51 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) PHE52 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pktekgkeslnkildasveliadkgflstsinditskagvAYgLfYFyfkskhdildeiirqfnrnmryylktytqnldsridvekvgmkkflewmnenkkyykifietqvhrpdiykwhfmklaeryttglseamrrgeiinvdpellsyvligiahmlgkryvlwsnsgltlkqqrdldliienmltpr >6en8_DF:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=SAFADR IN COMPLEX WITH DSDNA organism=Sulfolobus acidocaldarius DNA sequence DG(Q1):DC(Z21) DT(Q2):DA(Z20) DC(Q3):DG(Z19) DG(Q4):DC(Z18) DA(Q5):DT(Z17) DC(Q6):DG(Z16) DT(Q7):DA(Z15) DC(Q8):DG(Z14) DA(Q9):DT(Z13) DA(Q10):DT(Z12) DA(Q11):DT(Z11) DA(Q12):DT(Z10) DA(Q13):DT(Z9) DT(Q14):DA(Z8) DC(Q15):DG(Z7) DA(Q16):DT(Z6) DA(Q17):DT(Z5) DG(Q18):DC(Z4) DT(Q19):DA(Z3) DA(Q20):DT(Z2) DG(Q21):DC(Z1) chainD ( 34) ALA46 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) TYR47 0 0 0 2 6 15 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LEU49 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR51 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) PHE52 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 41) ALA46 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR47 0 0 0 0 3 11 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) LEU49 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 ( 46) TYR51 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) PHE52 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 prot.sequence eslnkildasveliadkgflstsinditskagvAYgLfYFyfkskhdildeiirqfnrnmryylktidvekvgmkkflewmnenkkyykifietqvhrpdiykwhfmklaeryttglseamrrgeiinvdpellsyvligiahmlgkryvlwsnsgltlkqqrdldliienmltp/pktekgkeslnkildasveliadkgflstsinditskagvAYgLfYFyfkskhdildeiirqfnrnmryylktytqnldsridvekvgmkkflewmnenkkyykifietqvhrpdiykwhfmklaeryttglseamrrgeiinvdpellsyvligiahmlgkryvlwsnsgltlkqqrdldliienmlt >6eo6_H:Trypsin-like_serine_proteases; title=X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA-THROMBIN AND MODIFIED 15-MER DNA APTAMER CONTAINING 5-(3-(2-(1H-INDOL-3- YL)ACETAMIDE-N-YL)-1-PROPEN-1-YL)-2'-DEOXYURIDINE RESIDUE organism=HOMO SAPIENS DNA sequence DG(D401) DG(D402) DT(D403) DG(D405) DG(D406) DT(D407) DG(D408) DT(D409) DG(D410) DG(D411) DT(D412) DT(D413) DG(D414) DG(D415) chainH ( 9) ILE372 0 0 0 0 0 0 0 0 0 0 8 0 0 0 ( 19) PHE382 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLN387 0 0 17 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU423 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 66) HIS429 0 0 0 0 0 0 0 0 0 0 7 0 0 0 ( 70) ARG433 0 0 0 23 0 0 0 0 0 11 3 7 0 0 ( 72) GLU435 0 0 0 0 0 0 0 0 0 0 9 0 0 0 ( 73) ARG436 0 4 0 0 0 0 0 0 0 0 0 10 31 0 ( 75) ILE438 0 0 0 0 0 0 0 0 0 0 4 2 0 0 prot.sequence ivegsdaeIgmspwqvmlFrkspQellcgaslisdrwvltaahcllyppwdknftendlLvrigkHsrtRyERnIekismlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfge >6eo7_H:Trypsin-like_serine_proteases; title=X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA-THROMBIN AND MODIFIED 15-MER DNA APTAMER CONTAINING 5-(3-(ACETAMIDE-N-YL)-1- PROPEN-1-YL)-2'-DEOXYURIDINE RESIDUE organism=HOMO SAPIENS DNA sequence DG(D401) DG(D402) DT(D403) DG(D405) DG(D406) DT(D407) DG(D408) DT(D409) DG(D410) DG(D411) DT(D412) DT(D413) DG(D414) DG(D415) chainH ( 9) ILE372 0 0 0 0 0 0 0 0 0 0 8 0 0 0 ( 66) HIS429 0 0 0 0 0 0 0 0 0 0 7 0 0 0 ( 70) ARG433 0 0 0 21 0 0 0 0 0 11 3 8 0 0 ( 71) TYR434 0 0 15 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLU435 0 0 0 0 0 0 0 0 0 0 9 0 0 0 ( 73) ARG436 0 4 0 0 0 0 0 0 0 0 0 9 30 0 ( 75) ILE438 0 0 0 0 0 0 0 0 0 0 3 1 0 0 ( 78) ILE441 0 0 7 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ivegsdaeIgmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkHsrtRYERnIekIsmlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfge >6erf_GH:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=COMPLEX OF APLF FACTOR AND KU HETERODIMER BOUND TO DNA organism=HOMO SAPIENS DNA sequence DT(P20):DG(O15) DA(P21):DT(O14) DA(P22):DT(O13) DT(P23):DA(O12) DA(P24):DT(O11) DA(P25):DT(O10) DA(P26):DT(O9) DC(P27):DG(O8) DT(P28):DA(O7) DA(P29):DT(O6) DA(P30):DT(O5) DA(P31):DT(O4) DA(P32):DT(O3) DA(P33):DT(O2) chainG chainH (255) ARG271 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence rdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketrkralsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslgpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkranpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfpliea >6erg_AB:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=COMPLEX OF XLF AND HETERODIMER KU BOUND TO DNA organism=HOMO SAPIENS DNA sequence DT(R11):DG(H21) DC(R15):DC(H20) DC(R16):DG(H19) DA(R17):DC(H18) DG(R18):DG(H17) DC(R19):DG(H16) DT(R20):DG(H15) DA(R21):DT(H14) DA(R22):DT(H13) DT(R23):DA(H12) DA(R24):DT(H11) DA(R25):DT(H10) DA(R26):DT(H9) DC(R27):DG(H8) DT(R28):DA(H7) DA(R29):DT(H6) DA(R30):DT(H5) DA(R31):DT(H4) DA(R32):DT(H3) DA(R33):DT(H2) DC(R34):DG(H1) chainA chainB ( 13) ASN-4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR-2 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) PHE-1 0 0 0 0 0 36 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG3 0 0 0 0 0 0 9 32 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) ILE245 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (264) ARG271 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 (266) LYS273 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence grdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketrkralsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/mhhhhhhhhhheNlYFqgvRsgnkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslgkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsIhwpcrltigsnlsiriaayksilqeRvKktwtvvdaktlkkediqketvycletevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkranpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfpliea >6erg_DE:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=COMPLEX OF XLF AND HETERODIMER KU BOUND TO DNA organism=HOMO SAPIENS DNA sequence DC(M14):DG(K21) DC(M15):DC(K20) DC(M16):DG(K19) DA(M17):DC(K18) DG(M18):DG(K17) DC(M19):DG(K16) DT(M20):DG(K15) DA(M21):DT(K14) DA(M22):DT(K13) DT(M23):DA(K12) DA(M24):DT(K11) DA(M25):DT(K10) DA(M26):DT(K9) DC(M27):DG(K8) DT(M28):DA(K7) DA(M29):DT(K6) DA(M30):DT(K5) DA(M31):DT(K4) DA(M32):DT(K3) DA(M33):DT(K2) DC(M34):DG(K1) chainD chainE ( 13) ASN-4 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR-2 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) PHE-1 0 0 0 0 0 38 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG3 0 0 0 0 0 0 9 28 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) ILE245 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (264) ARG271 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 (266) LYS273 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketrkralsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/mhhhhhhhhhheNlYFqgvRsgnkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslgkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsIhwpcrltigsnlsiriaayksilqeRvKktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkranpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieak >6erh_A:SPOC_domain-like;vWA-like; title=COMPLEX OF XLF AND HETERODIMER KU BOUND TO DNA organism=HOMO SAPIENS DNA sequence DG(K1):DC(F34) DT(K2):DA(F33) DT(K3):DA(F32) DT(K4):DA(F31) DT(K5):DA(F30) DT(K6):DA(F29) DA(K7):DT(F28) DG(K8):DC(F27) DT(K9):DA(F26) DT(K10):DA(F25) DT(K11):DA(F24) DA(K12):DT(F23) DT(K13):DA(F22) DT(K14):DA(F21) DG(K15):DT(F20) DG(K16):DC(F19) DG(K17):DG(F18) DC(K18):DA(F17) DG(K19):DC(F16) DC(K20):DC(F15) DG(K21):DT(F12) chainA (210) ARG254 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence grdsliflvdaskamfesdeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaedrvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy >6erh_AB:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=COMPLEX OF XLF AND HETERODIMER KU BOUND TO DNA organism=HOMO SAPIENS DNA sequence DG(K1):DC(F34) DT(K2):DA(F33) DT(K3):DA(F32) DT(K4):DA(F31) DT(K5):DA(F30) DT(K6):DA(F29) DA(K7):DT(F28) DG(K8):DC(F27) DT(K9):DA(F26) DT(K10):DA(F25) DT(K11):DA(F24) DA(K12):DT(F23) DT(K13):DA(F22) DT(K14):DA(F21) DG(K15):DT(F20) DG(K16):DC(F19) DG(K17):DG(F18) DC(K18):DA(F17) DG(K19):DC(F16) DC(K20):DC(F15) DG(K21):DT(F12) chainA (210) ARG254 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 13) ASN-4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 15) TYR-2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 16) PHE-1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 32 0 0 0 0 0 ( 20) ARG3 0 0 0 0 0 0 0 0 0 0 0 0 0 30 9 0 0 0 0 0 0 (263) ARG271 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 (265) LYS273 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence grdsliflvdaskamfesdeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaedrvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/mhhhhhhhhhheNlYFqgvRsgnkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvKktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkranpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfpliea >6erh_CD:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=COMPLEX OF XLF AND HETERODIMER KU BOUND TO DNA organism=HOMO SAPIENS DNA sequence DG(R1):DC(O34) DT(R2):DA(O33) DT(R3):DA(O32) DT(R4):DA(O31) DT(R5):DA(O30) DT(R6):DA(O29) DA(R7):DT(O28) DG(R8):DC(O27) DT(R9):DA(O26) DT(R10):DA(O25) DT(R11):DA(O24) DA(R12):DT(O23) DT(R13):DA(O22) DT(R14):DA(O21) DG(R15):DT(O20) DG(R16):DC(O19) DG(R17):DG(O18) DC(R18):DA(O17) DG(R19):DC(O16) DC(R20):DT(O11) DG(R21):DC(O10) chainC (213) ARG254 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 13) ASN-4 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 15) TYR-2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 16) PHE-1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 34 0 0 0 0 0 ( 20) ARG3 0 0 0 0 0 0 0 0 0 0 0 0 0 29 9 0 0 0 0 0 0 (263) ARG271 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 (265) LYS273 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (392) ARG400 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 prot.sequence grdsliflvdaskamfesqdeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaervhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/mhhhhhhhhhheNlYFqgvRsgnkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvKktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieak >6erp_ACF:HMG-box;DNA/RNA_polymerases;S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF THE HUMAN MITOCHONDRIAL TRANSCRIPTION INITIATION COMPLEX AT THE LSP PROMOTER organism=HOMO SAPIENS DNA sequence DT(D1):DA(E50) DG(D2):DC(E49) DT(D3):DA(E48) DT(D4):DA(E47) DA(D5):DT(E46) DG(D6):DC(E45) DT(D7):DA(E44) DT(D8):DA(E43) DG(D9):DC(E42) DG(D10):DC(E41) DG(D11):DC(E40) DG(D12):DC(E39) DG(D13):DC(E38) DG(D14):DC(E37) DT(D15):DA(E36) DG(D16):DC(E35) DA(D17):DT(E34) DC(D18):DG(E33) DT(D19):DA(E32) DG(D20):DC(E31) DT(D21):DA(E30) DT(D22):DA(E29) DA(D23):DT(E28) DA(D24):DT(E27) DA(D25):DT(E26) DA(D26):DT(E25) DG(D27):DC(E24) DT(D28):DA(E23) DG(D29):DC(E22) DC(D30):DG(E21) DA(D31):DT(E20) DT(D32):DA(E19) DA(D33):DT(E18) DC(D34):DG(E17) DC(D35):DG(E16) DA(D37):DC(E15) DT(D38):DG(E14) DG(D43):DC(E8) DA(D44):DT(E7) DT(D45):DA(E6) DA(D46):DT(E5) DG(D47):DC(E4) DG(D48):DC(E3) DC(D49):DG(E2) DC(D50):DG(E1) chainC ( 10) LYS52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ILE81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG157 0 0 0 6 8 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) TYR162 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) ASN163 0 0 0 0 0 1 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) VAL166 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) PHE170 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PRO178 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) GLN179 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) LEU182 0 0 0 0 0 0 0 10 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (310) ARG502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 (421) GLN616 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 0 (880) THR1099 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (884) ASN1103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (894) ARG1113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 chainF (125) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 prot.sequence wakilekdkrtqqmrmqrlkaklqmqlsgqqqrllaffkcclltdqlplahhllvvhhgqrqkrklltldmynavmlgwarqgafkelvyvlfmvkdagltpdllsyaaalqcmgrqdqdagtiercleqmsqeglklqalftavllseedratvlkavhkvkptfslppqlpppvntskllrdvyakdgrvsypklhlplktlqclfekqlhmelasrvcvvsvekptlpskevkharktlktlrdqwekalcralretknrlerevyegrfslypflcllderevvrmllqvlqalpaqgesfttlaRelsartfsrhvvqrqrvsgqvqalqnhyrkylcllasdaevpepclprqywealgapealreqpwplpvqmelgkllaemlvqatqmpcsldrssrlvpvlyhvysfrnvQqigilkphpayvqllekaaeptltfeavdvpmlcpplpwtsphsgafllsptklmrtvegatqhqelletcpptalhgaldaltqlgncawrvngrvldlvlqlfqakgcpqlgvpappseapelahcqkvaremhslraealyrlslaqhlrdrvfwlphnmdfrgrtypcpphfnhlgsdvarallefaqgrplgphgldwlkihlvnltglkkreplrkrlafaeevmddildsadqpltgrkwwmgaeepwqtlaccmevanavrasdpaayvshlpvhqdgscnglqhyaalgrdsvgaasvnlepsdvpqdvysgvaaqvevfrrqdaqrgmrvaqvlegfitrkvvkqtvmtvvygvtryggrlqiekrlrelsdfpqefvweashylvrqvfkslqemfsgtraiqhwltesarlishmgsvvewvtplgvpviqpyrldskvkqiggsiTythNgdisrkpntRkqkngfppnfihsldsshmmltalhcyrkgltfvsvhdcywthaadvsvmnqvcreqfvrlhsepilqdlsrflvkrfcsepqkileasqlketlqavpkpgafdleqvkrstyffs/ssvlasspkKpvSsYLrfSkeqlpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkamtkkkeltllgkpkRprsaYNvyVaerFqeakgdsPQekLktvkenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllrrt/kryvtdrrlaetlaqiylghlllecnpgpgiltqalleagakvvalesdktfiphleslgknldgklrvihcdffkldprsggvikppamssrglfknlgieavpwtadiplkvvgmfpsrgekRalwklaydlysctsiykfgrievnmfigekefqklmadpgnpdlyhvlsviwqlaceikvlhmepklyliqmiprqnlftknltpmnyniffhllkhcfgrrsatvidhlrsltpldardilmqigkqedekvvnmhpqdfktlfetierskdcaykwlydet >6erp_BGJ:HMG-box;DNA/RNA_polymerases;S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF THE HUMAN MITOCHONDRIAL TRANSCRIPTION INITIATION COMPLEX AT THE LSP PROMOTER organism=HOMO SAPIENS DNA sequence DG(I1):DC(H50) DG(I2):DC(H49) DC(I3):DG(H48) DC(I4):DG(H47) DT(I5):DA(H46) DA(I6):DT(H45) DT(I7):DA(H44) DC(I8):DG(H43) DG(I14):DT(H38) DC(I15):DA(H37) DG(I16):DC(H35) DG(I17):DC(H34) DT(I18):DA(H33) DA(I19):DT(H32) DT(I20):DA(H31) DG(I21):DC(H30) DC(I22):DG(H29) DA(I23):DT(H28) DC(I24):DG(H27) DT(I25):DA(H26) DT(I26):DA(H25) DT(I27):DA(H24) DT(I28):DA(H23) DA(I29):DT(H22) DA(I30):DT(H21) DC(I31):DG(H20) DA(I32):DT(H19) DG(I33):DC(H18) DT(I34):DA(H17) DC(I35):DG(H16) DA(I36):DT(H15) DC(I37):DG(H14) DC(I38):DG(H13) DC(I39):DG(H12) DC(I40):DG(H11) DC(I41):DG(H10) DC(I42):DG(H9) DA(I43):DT(H8) DA(I44):DT(H7) DC(I45):DG(H6) DT(I46):DA(H5) DA(I47):DT(H4) DA(I48):DT(H3) DC(I49):DG(H2) DA(I50):DT(H1) chainG ( 10) LYS52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ILE81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 8 1 0 0 0 (120) TYR162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 (121) ASN163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 (124) VAL166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (128) PHE170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (136) PRO178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 (137) GLN179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 (140) LEU182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 2 0 0 0 0 0 0 0 chainB (310) ARG502 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) GLN616 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (861) ASP1085 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (872) THR1099 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (874) THR1101 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (886) ARG1113 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (125) ARG202 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wakilekdkrtqqmrmqrlkaklqmqlsgqqqrllaffkcclltdqlplahhllvvhhgqrqkrklltldmynavmlgwarqgafkelvyvlfmvkdagltpdllsyaaalqcmgrqdqdagtiercleqmsqeglklqalftavllseedratvlkavhkvkptfslppqlpppvntskllrdvyakdgrvsypklhlplktlqclfekqlhmelasrvcvvsvekptlpskevkharktlktlrdqwekalcralretknrlerevyegrfslypflcllderevvrmllqvlqalpaqgesfttlaRelsartfsrhvvqrqrvsgqvqalqnhyrkylcllasdaevpepclprqywealgapealreqpwplpvqmelgkllaemlvqatqmpcsldrssrlvpvlyhvysfrnvQqigilkphpayvqllekaaeptltfeavdvpmlcpplpwtsphsgafllsptklmrtatqhqelletcpptalhgaldaltqlgncawrvngrvldlvlqlfqakgcpqlgvpappsehcqkvaremhslraealyrlslaqhlrdrvfwlphnmdfrgrtypcpphfnhlgsdvarallefaqgrplgphgldwlkihlvnltglkkreplrkrlafaeevmddildsadqpltgrkwwmgaeepwqtlaccmevanavrasdpaayvshlpvhqdgscnglqhyaalgrdsvgaasvnlepsdvpqdvysgvaaqvevfrrqdaqrgmrvaqvlegfitrkvvkqtvmtvvygvtryggrlqiekrlrelsdfpqefvweashylvrqvfkslqemfsgtraiqhwltesarlishmgsvvewvtplgvpviqpyrlDskvkqiggsiTyThngdisrkpntRkqkngfppnfihsldsshmmltalhcyrkgltfvsvhdcywthaadvsvmnqvcreqfvrlhsepilqdlsrflvkrfcsepqkileasqlketlqavpkpgafdleqvkrstyffs/ssvlasspkKpvSsYLrfSkeqLpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkamtkkkeltllgkpkRprsaYNvyVaerFqeakgdsPQekLktvkenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllrrt/kryvtdrrlaetlaqiylghlllecnpgpgiltqalleagakvvalesdktfiphleslgknldgklrvihcdffkldprsggvikppamssrglfknlgieavpwtadiplkvvgmfpsrgekRalwklaydlysctsiykfgrievnmfigekefqklmadpgnpdlyhvlsviwqlaceikvlhmepklyliqmiprqnlftknltpmnyniffhllkhcfgrrsatvidhlrsltpldardilmqigkqedekvvnmhpqdfktlfetierskdcaykwlydet >6erp_J:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF THE HUMAN MITOCHONDRIAL TRANSCRIPTION INITIATION COMPLEX AT THE LSP PROMOTER organism=HOMO SAPIENS DNA sequence DG(I1):DC(H50) DG(I2):DC(H49) DC(I3):DG(H48) DC(I4):DG(H47) DT(I5):DA(H46) DA(I6):DT(H45) DT(I7):DA(H44) DC(I8):DG(H43) DG(I14):DT(H38) DC(I15):DA(H37) DG(I16):DC(H35) DG(I17):DC(H34) DT(I18):DA(H33) DA(I19):DT(H32) DT(I20):DA(H31) DG(I21):DC(H30) DC(I22):DG(H29) DA(I23):DT(H28) DC(I24):DG(H27) DT(I25):DA(H26) DT(I26):DA(H25) DT(I27):DA(H24) DT(I28):DA(H23) DA(I29):DT(H22) DA(I30):DT(H21) DC(I31):DG(H20) DA(I32):DT(H19) DG(I33):DC(H18) DT(I34):DA(H17) DC(I35):DG(H16) DA(I36):DT(H15) DC(I37):DG(H14) DC(I38):DG(H13) DC(I39):DG(H12) DC(I40):DG(H11) DC(I41):DG(H10) DC(I42):DG(H9) DA(I43):DT(H8) DA(I44):DT(H7) DC(I45):DG(H6) DT(I46):DA(H5) DA(I47):DT(H4) DA(I48):DT(H3) DC(I49):DG(H2) DA(I50):DT(H1) chainJ (125) ARG202 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kryvtdrrlaetlaqiylghlllecnpgpgiltqalleagakvvalesdktfiphleslgknldgklrvihcdffkldprsggvikppamssrglfknlgieavpwtadiplkvvgmfpsrgekRalwklaydlysctsiykfgrievnmfigekefqklmadpgnpdlyhvlsviwqlaceikvlhmepklyliqmiprqnlftknltpmnyniffhllkhcfgrrsatvidhlrsltpldardilmqigkqedekvvnmhpqdfktlfetierskdcaykwlydet >6erq_ACF:HMG-box;DNA/RNA_polymerases;S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF THE HUMAN MITOCHONDRIAL TRANSCRIPTION INITIATION COMPLEX AT THE HSP PROMOTER organism=HOMO SAPIENS DNA sequence DG(E1):DC(D50) DG(E2):DC(D49) DC(E3):DG(D48) DC(E4):DG(D47) DT(E5):DA(D46) DG(E6):DC(D45) DT(E7):DA(D44) DC(E8):DG(D43) DG(E14):DA(D38) DG(E15):DT(D37) DT(E16):DA(D35) DT(E17):DA(D34) DT(E18):DA(D33) DG(E19):DC(D32) DG(E20):DC(D31) DT(E21):DA(D30) DT(E22):DA(D29) DG(E23):DC(D28) DG(E24):DC(D27) DT(E25):DA(D26) DT(E26):DA(D25) DC(E27):DG(D24) DG(E28):DC(D23) DG(E29):DC(D22) DG(E30):DC(D21) DG(E31):DC(D20) DT(E32):DA(D19) DA(E33):DT(D18) DT(E34):DA(D17) DG(E35):DC(D16) DG(E36):DC(D15) DG(E37):DC(D14) DG(E38):DC(D13) DT(E39):DA(D12) DT(E40):DA(D11) DA(E41):DT(D10) DG(E42):DC(D9) DC(E43):DG(D8) DA(E44):DT(D7) DG(E45):DC(D6) DC(E46):DG(D5) DG(E47):DC(D4) DG(E48):DC(D3) DT(E49):DA(D2) DG(E50):DC(D1) chainC ( 10) LYS52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ILE81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 5 0 0 0 (120) TYR162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 (121) ASN163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 (124) VAL166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (136) PRO178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 (137) GLN179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 (140) LEU182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 0 0 0 0 0 0 0 chainA (310) ARG502 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) VAL615 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) GLN616 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (479) VAL674 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (880) THR1099 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (882) THR1101 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (884) ASN1103 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (894) ARG1113 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (125) ARG202 0 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wakilekdkrtqqmrmqrlkaklqmqlsgqqqrllaffkcclltdqlplahhllvvhhgqrqkrklltldmynavmlgwarqgafkelvyvlfmvkdagltpdllsyaaalqcmgrqdqdagtiercleqmsqeglklqalftavllseedratvlkavhkvkptfslppqlpppvntskllrdvyakdgrvsypklhlplktlqclfekqlhmelasrvcvvsvekptlpskevkharktlktlrdqwekalcralretknrlerevyegrfslypflcllderevvrmllqvlqalpaqgesfttlaRelsartfsrhvvqrqrvsgqvqalqnhyrkylcllasdaevpepclprqywealgapealreqpwplpvqmelgkllaemlvqatqmpcsldrssrlvpvlyhvysfrnVQqigilkphpayvqllekaaeptltfeavdvpmlcpplpwtsphsgafllsptklmrtVegatqhqelletcpptalhgaldaltqlgncawrvngrvldlvlqlfqakgcpqlgvpappseapelahcqkvaremhslraealyrlslaqhlrdrvfwlphnmdfrgrtypcpphfnhlgsdvarallefaqgrplgphgldwlkihlvnltglkkreplrkrlafaeevmddildsadqpltgrkwwmgaeepwqtlaccmevanavrasdpaayvshlpvhqdgscnglqhyaalgrdsvgaasvnlepsdvpqdvysgvaaqvevfrrqdaqrgmrvaqvlegfitrkvvkqtvmtvvygvtryggrlqiekrlrelsdfpqefvweashylvrqvfkslqemfsgtraiqhwltesarlishmgsvvewvtplgvpviqpyrldskvkqiggsiTyThNgdisrkpntRkqkngfppnfihsldsshmmltalhcyrkgltfvsvhdcywthaadvsvmnqvcreqfvrlhsepilqdlsrflvkrfcsepqkileasqlketlqavpkpgafdleqvkrstyffs/ssvlasspkKpvSsYLrfSkeqlpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkamtkkkeltllgkpkRprsaYNvyVaerfqeakgdsPQekLktvkenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllrrt/kryvtdrrlaetlaqiylghlllecnpgpgiltqalleagakvvalesdktfiphleslgknldgklrvihcdffkldprsggvikppamssrglfknlgieavpwtadiplkvvgmfpsrgekRalwklaydlysctsiykfgrievnmfigekefqklmadpgnpdlyhvlsviwqlaceikvlhmepklyliqmiprqnlftknltpmnyniffhllkhcfgrrsatvidhlrsltpldardilmqigkqedekvvnmhpqdfktlfetierskdcaykwlydet >6erq_B:DNA/RNA_polymerases; title=STRUCTURE OF THE HUMAN MITOCHONDRIAL TRANSCRIPTION INITIATION COMPLEX AT THE HSP PROMOTER organism=? DNA sequence DG(I1):DC(H50) DG(I2):DC(H49) DC(I3):DG(H48) DC(I4):DG(H47) DT(I5):DA(H46) DG(I6):DC(H45) DT(I7):DA(H44) DC(I8):DG(H43) DG(I14):DA(H38) DG(I15):DT(H37) DT(I16):DA(H35) DT(I17):DA(H34) DT(I18):DA(H33) DG(I19):DC(H32) DG(I20):DC(H31) DT(I21):DA(H30) DT(I22):DA(H29) DG(I23):DC(H28) DG(I24):DC(H27) DT(I25):DA(H26) DT(I26):DA(H25) DC(I27):DG(H24) DG(I28):DC(H23) DG(I29):DC(H22) DG(I30):DC(H21) DG(I31):DC(H20) DT(I32):DA(H19) DA(I33):DT(H18) DT(I34):DA(H17) DG(I35):DC(H16) DG(I36):DC(H15) DG(I37):DC(H14) DG(I38):DC(H13) DT(I39):DA(H12) DT(I40):DA(H11) DA(I41):DT(H10) DG(I42):DC(H9) DC(I43):DG(H8) DA(I44):DT(H7) DG(I45):DC(H6) DC(I46):DG(H5) DG(I47):DC(H4) DG(I48):DC(H3) DT(I49):DA(H2) DG(I50):DC(H1) chainB (310) ARG502 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) VAL615 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) GLN616 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (860) ASP1085 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (871) THR1099 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (873) THR1101 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (874) HIS1102 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (875) ASN1103 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (885) ARG1113 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wakilekdkrtqqmrmqrlkaklqmqlsgqqqrllaffkcclltdqlplahhllvvhhgqrqkrklltldmynavmlgwarqgafkelvyvlfmvkdagltpdllsyaaalqcmgrqdqdagtiercleqmsqeglklqalftavllseedratvlkavhkvkptfslppqlpppvntskllrdvyakdgrvsypklhlplktlqclfekqlhmelasrvcvvsvekptlpskevkharktlktlrdqwekalcralretknrlerevyegrfslypflcllderevvrmllqvlqalpaqgesfttlaRelsartfsrhvvqrqrvsgqvqalqnhyrkylcllasdaevpepclprqywealgapealreqpwplpvqmelgkllaemlvqatqmpcsldrssrlvpvlyhvysfrnVQqigilkphpayvqllekaaeptltfeavdvpmlcpplpwtsphsgafllsptklmratqhqelletcpptalhgaldaltqlgncawrvngrvldlvlqlfqakgcpqlgvpappsehcqkvaremhslraealyrlslaqhlrdrvfwlphnmdfrgrtypcpphfnhlgsdvarallefaqgrplgphgldwlkihlvnltglkkreplrkrlafaeevmddildsadqpltgrkwwmgaeepwqtlaccmevanavrasdpaayvshlpvhqdgscnglqhyaalgrdsvgaasvnlepsdvpqdvysgvaaqvevfrrqdaqrgmrvaqvlegfitrkvvkqtvmtvvygvtryggrlqiekrlrelsdfpqefvweashylvrqvfkslqemfsgtraiqhwltesarlishmgsvvewvtplgvpviqpyrlDskvkqiggsiTyTHNgdisrkpntRkqkngfppnfihsldsshmmltalhcyrkgltfvsvhdcywthaadvsvmnqvcreqfvrlhsepilqdlsrflvkrfcsepqkileasqlketlqavpkpgafdleqvkrstyffs >6erq_BGJ:HMG-box;DNA/RNA_polymerases;S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF THE HUMAN MITOCHONDRIAL TRANSCRIPTION INITIATION COMPLEX AT THE HSP PROMOTER organism=HOMO SAPIENS DNA sequence DC(H1):DG(I50) DA(H2):DT(I49) DC(H3):DG(I48) DC(H4):DG(I47) DG(H5):DC(I46) DC(H6):DG(I45) DT(H7):DA(I44) DG(H8):DC(I43) DC(H9):DG(I42) DT(H10):DA(I41) DA(H11):DT(I40) DA(H12):DT(I39) DC(H13):DG(I38) DC(H14):DG(I37) DC(H15):DG(I36) DC(H16):DG(I35) DA(H17):DT(I34) DT(H18):DA(I33) DA(H19):DT(I32) DC(H20):DG(I31) DC(H21):DG(I30) DC(H22):DG(I29) DC(H23):DG(I28) DG(H24):DC(I27) DA(H25):DT(I26) DA(H26):DT(I25) DC(H27):DG(I24) DC(H28):DG(I23) DA(H29):DT(I22) DA(H30):DT(I21) DC(H31):DG(I20) DC(H32):DG(I19) DA(H33):DT(I18) DA(H34):DT(I17) DA(H35):DT(I16) DT(H37):DG(I15) DA(H38):DG(I14) DG(H43):DC(I8) DA(H44):DT(I7) DC(H45):DG(I6) DA(H46):DT(I5) DG(H47):DC(I4) DG(H48):DC(I3) DC(H49):DG(I2) DC(H50):DG(I1) chainG ( 10) LYS52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) THR78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ILE81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ARG157 0 0 0 1 10 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) TYR162 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) ASN163 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) VAL166 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) PHE170 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PRO178 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) GLN179 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) LEU182 0 0 0 0 0 0 0 2 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (310) ARG502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 (420) VAL615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (421) GLN616 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60 0 0 0 0 0 0 0 0 0 0 (860) ASP1085 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (871) THR1099 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (873) THR1101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 (874) HIS1102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (875) ASN1103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (885) ARG1113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 chainJ (124) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (125) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 prot.sequence wakilekdkrtqqmrmqrlkaklqmqlsgqqqrllaffkcclltdqlplahhllvvhhgqrqkrklltldmynavmlgwarqgafkelvyvlfmvkdagltpdllsyaaalqcmgrqdqdagtiercleqmsqeglklqalftavllseedratvlkavhkvkptfslppqlpppvntskllrdvyakdgrvsypklhlplktlqclfekqlhmelasrvcvvsvekptlpskevkharktlktlrdqwekalcralretknrlerevyegrfslypflcllderevvrmllqvlqalpaqgesfttlaRelsartfsrhvvqrqrvsgqvqalqnhyrkylcllasdaevpepclprqywealgapealreqpwplpvqmelgkllaemlvqatqmpcsldrssrlvpvlyhvysfrnVQqigilkphpayvqllekaaeptltfeavdvpmlcpplpwtsphsgafllsptklmratqhqelletcpptalhgaldaltqlgncawrvngrvldlvlqlfqakgcpqlgvpappsehcqkvaremhslraealyrlslaqhlrdrvfwlphnmdfrgrtypcpphfnhlgsdvarallefaqgrplgphgldwlkihlvnltglkkreplrkrlafaeevmddildsadqpltgrkwwmgaeepwqtlaccmevanavrasdpaayvshlpvhqdgscnglqhyaalgrdsvgaasvnlepsdvpqdvysgvaaqvevfrrqdaqrgmrvaqvlegfitrkvvkqtvmtvvygvtryggrlqiekrlrelsdfpqefvweashylvrqvfkslqemfsgtraiqhwltesarlishmgsvvewvtplgvpviqpyrlDskvkqiggsiTyTHNgdisrkpntRkqkngfppnfihsldsshmmltalhcyrkgltfvsvhdcywthaadvsvmnqvcreqfvrlhsepilqdlsrflvkrfcsepqkileasqlketlqavpkpgafdleqvkrstyffs/ssvlasspkKpvSsYLrfSkeqLpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkamtkkkeltllgkpkRprsaYNvyVaerFqeakgdsPQekLktvkenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllrrt/kryvtdrrlaetlaqiylghlllecnpgpgiltqalleagakvvalesdktfiphleslgknldgklrvihcdffkldprsggvikppamssrglfknlgieavpwtadiplkvvgmfpsrgeKRalwklaydlysctsiykfgrievnmfigekefqklmadpgnpdlyhvlsviwqlaceikvlhmepklyliqmiprqnlftknltpmnyniffhllkhcfgrrsatvidhlrsltpldardilmqigkqedekvvnmhpqdfktlfetierskdcaykwlydet >6es2_K:Homeodomain-like; title=STRUCTURE OF CDX2-DNA(CAA) organism=Homo sapiens DNA sequence DT(A1):DA(D36) DT(A2):DA(D35) DG(A3):DC(D34) DT(A4):DA(D33) DG(A5):DC(D32) DT(A6):DA(D31) DT(A7):DA(D30) DT(A8):DA(D29) DT(A9):DA(D28) DA(A10):DT(D27) DT(A11):DA(D26) DT(A12):DA(D25) DG(A13):DC(D24) DC(A14):DG(D23) DC(A15):DG(D22) DT(A16):DA(D21) DC(A17):DG(D20) DC(A18):DG(D19) chainK ( 3) TYR189 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 ( 4) ARG190 0 0 0 0 0 0 9 10 4 0 0 0 0 0 0 0 0 0 ( 46) ILE232 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 ( 49) GLN235 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 ( 50) ASN236 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 prot.sequence dkYRvvytdhqrlelekefhysryitirrkaelaatlglserqvkIwfQNrrakerkinkkklqqqqqqq >6es3_K:Homeodomain-like; title=STRUCTURE OF CDX2-DNA(TCG) organism=Homo sapiens DNA sequence DG(F19):DC(A18) DG(F20):DC(A17) DA(F21):DT(A16) DG(F22):DC(A15) DG(F23):DC(A14) DT(F24):DA(A13) DC(F25):DG(A12) DG(F26):DC(A11) DT(F27):DA(A10) DA(F28):DT(A9) DA(F29):DT(A8) DA(F30):DT(A7) DA(F31):DT(A6) DC(F32):DG(A5) DA(F33):DT(A4) DC(F34):DG(A3) DA(F35):DT(A2) DA(F36):DT(A1) chainK ( 6) TYR189 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 ( 7) ARG190 0 0 0 0 0 0 0 0 0 6 12 9 1 0 0 0 0 0 ( 49) ILE232 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 52) GLN235 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ASN236 0 0 0 0 0 0 0 1 10 9 0 0 0 0 0 0 0 0 prot.sequence rtkdkYRvvytdhqrlelekefhysryitirrkaelaatlglserqvkIwfQNrrakerkinkkklqqqqqq >6esf_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME : CLASS 1 organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I17):DT(J-16) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/trssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgissKamsimnsfvndvferiageasrlahynkrstitsReiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/ktrkesyaiyvykvlkqvhpdtgissKamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6esf_G:Histone-fold; title=NUCLEOSOME : CLASS 1 organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I17):DT(J-16) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainG ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence trssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt >6esg_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME BREATHING : CLASS 2 organism=XENOPUS LAEVIS DNA sequence DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J13):DA(I-12) DT(J14):DA(I-13) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 12) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE chainF ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/dniqgitkpaiRrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/trssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvl/syaiyvykvlkqvhpdtgisskamsiMnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/rpgtvalreirryqkstellirklpfQrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/trssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/syaiyvykvlkqvhpdtgisskamsiMnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6esg_G:Histone-fold; title=NUCLEOSOME BREATHING : CLASS 2 organism=XENOPUS LAEVIS DNA sequence DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-13):DT(J14) DA(I-12):DT(J13) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) chainG ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence trssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp >6esh_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME BREATHING : CLASS 3 organism=XENOPUS LAEVIS DNA sequence DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) LYS119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainH prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfg/trssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvl/kesyaiyvykvlkqvhpdtgisskamSimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/trssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkK/syaiyvykvlkqvhpdtgisskamsiMnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6esi_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME BREATHING : CLASS 4 organism=XENOPUS LAEVIS DNA sequence DC(J-73):DG(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG42 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 53) LYS77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE chainF ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 26) GLU41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS74 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 1) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehaKrktvtamdvvyalkrqgrtlygfgg/rssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnAardnkktriiprhlqlavrndeelnkllgrvtia/kesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkRstitsreiqtavrlllpgelakhavsegtkavtkytsar/lreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseayLvalfedtnlcaihakrvtimpkdiqlarrirger/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/trssraglqfpvgrvhrllrkgnyaErvgagapvylaavleyltaeilelagnaardnKktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6eu0_ABEPVYZ:TATA-box_binding_protein-like;"Winged_helix"_DNA-binding_domain;NTF2-like;Homeodomain-like;Cyclin-like;Zinc_beta-ribbon; title=RNA POLYMERASE III OPEN PRE-INITIATION COMPLEX (OC-PIC) organism=? DNA sequence DC(S1):DG(R70) DG(S2):DC(R69) DA(S3):DT(R68) DA(S4):DT(R67) DG(S5):DC(R66) DG(S6):DC(R65) DG(S7):DC(R64) DT(S8):DA(R63) DT(S9):DA(R62) DA(S10):DT(R61) DC(S11):DG(R60) DT(S12):DA(R59) DT(S13):DA(R58) DC(S14):DG(R57) DG(S15):DC(R56) DC(S16):DG(R55) DG(S17):DC(R54) DA(S18):DT(R53) DA(S19):DT(R52) DC(S30):DG(R41) DG(S31):DC(R40) DA(S32):DT(R39) DA(S33):DT(R38) DA(S34):DT(R37) DA(S35):DT(R36) DA(S36):DT(R35) DA(S37):DT(R34) DA(S38):DT(R33) DC(S39):DG(R32) DA(S40):DT(R31) DT(S41):DA(R30) DT(S42):DA(R29) DT(S43):DA(R28) DT(S44):DA(R27) DT(S45):DA(R26) DT(S46):DA(R25) DT(S47):DA(R24) DA(S48):DT(R23) DT(S49):DA(R22) DA(S50):DT(R21) DG(S51):DC(R20) DT(S52):DA(R19) DA(S53):DT(R18) DG(S54):DC(R17) DC(S55):DG(R16) DC(S56):DG(R15) DG(S57):DC(R14) DA(S58):DT(R13) DA(S59):DT(R12) DA(S60):DT(R11) DA(S61):DT(R10) chainA (184) ARG184 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (867) THR879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (868) ALA880 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (445) LYS482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainP chainV chainY ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ILE115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 7 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainZ ( 83) GLN118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqrrclhcgalngvvkkaaagagsaalkiihdtfRwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpvkpirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavkTAetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepgtqmtlktfsmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriaindvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitrfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalkan/intaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeksrKvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsadapnpnnvnvqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm/lsdnaktlhsqmmskgigalftqqelqkqmgigsltdlmsivqelldknliklvkqndelkfqgvleseaqkkatmsaeealvysyieasgregiwsktikartnlhqhvvlkclkslesqryvksvksvkfptrkiymlyslqpsvftdgeldiefinslltivwrfisentfpngfknfengpkknvfyapnvknysttqeilefitaaqvanveltpsnirslcevlvyddklekvthdcyrvtlesilqmnqgegepeagnkaledeeefsifnyfkmfpaskhdkevvyfdew/kkvrdgesakyfideenftmaelckpnfpigqisenfekskmakkaklekrrhlrelrmrarqefkplhsltkeeqeeeeekrkeerdklesdrkahtaiqlkgtmaideetmvvdrhknaeneykekvdenpfanlynygsygrgsytdpwtveemikfykalsmwgtdfnlisqlypyrsrkqvkakfvneekkrpilielalrsklppnfdeycceikknigtvadfneklielqnehkhhmkeieeakntakeedqtaqrlndanlnkk/sgivptlqNiVatvtlgcrldlktvalharnaeynpkRFaavimrirepkttalIfasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNivgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm/mpvcknchgteferdlsnanndlvckacgvvsednpivssreatlnnarrklravsyalhipeyitdaafqwyklalannfvQgrrsqnviasclyvacrkekthhmlidfssrlqvsvysigatflkmvkklhitelpladpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeetlqqrlnefkntkaaklsvqkfrendvedgearppsfvknrkkerkiprnlhllpttdtylskvsddpdnledvddeelnahllneeasklkeriwiglnadflleqeskrlkqeadiatg >6eu0_Z:Cyclin-like;Zinc_beta-ribbon; title=RNA POLYMERASE III OPEN PRE-INITIATION COMPLEX (OC-PIC) organism=? DNA sequence DC(S1):DG(R70) DG(S2):DC(R69) DA(S3):DT(R68) DA(S4):DT(R67) DG(S5):DC(R66) DG(S6):DC(R65) DG(S7):DC(R64) DT(S8):DA(R63) DT(S9):DA(R62) DA(S10):DT(R61) DC(S11):DG(R60) DT(S12):DA(R59) DT(S13):DA(R58) DC(S14):DG(R57) DG(S15):DC(R56) DC(S16):DG(R55) DG(S17):DC(R54) DA(S18):DT(R53) DA(S19):DT(R52) DC(S30):DG(R41) DG(S31):DC(R40) DA(S32):DT(R39) DA(S33):DT(R38) DA(S34):DT(R37) DA(S35):DT(R36) DA(S36):DT(R35) DA(S37):DT(R34) DA(S38):DT(R33) DC(S39):DG(R32) DA(S40):DT(R31) DT(S41):DA(R30) DT(S42):DA(R29) DT(S43):DA(R28) DT(S44):DA(R27) DT(S45):DA(R26) DT(S46):DA(R25) DT(S47):DA(R24) DA(S48):DT(R23) DT(S49):DA(R22) DA(S50):DT(R21) DG(S51):DC(R20) DT(S52):DA(R19) DA(S53):DT(R18) DG(S54):DC(R17) DC(S55):DG(R16) DC(S56):DG(R15) DG(S57):DC(R14) DA(S58):DT(R13) DA(S59):DT(R12) DA(S60):DT(R11) DA(S61):DT(R10) chainZ ( 83) GLN118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mpvcknchgteferdlsnanndlvckacgvvsednpivssreatlnnarrklravsyalhipeyitdaafqwyklalannfvQgrrsqnviasclyvacrkekthhmlidfssrlqvsvysigatflkmvkklhitelpladpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeetlqqrlnefkntkaaklsvqkfrendvedgearppsfvknrkkerkiprnlhllpttdtylskvsddpdnledvddeelnahllneeasklkeriwiglnadflleqeskrlkqeadiatg >6eu1_ABE:"Winged_helix"_DNA-binding_domain; title=RNA POLYMERASE III - OPEN DNA COMPLEX (OC-POL3). organism=? DNA sequence DC(S1):DG(R70) DG(S2):DC(R69) DA(S3):DT(R68) DA(S4):DT(R67) DG(S5):DC(R66) DG(S6):DC(R65) DG(S7):DC(R64) DT(S8):DA(R63) DT(S9):DA(R62) DA(S10):DT(R61) DC(S11):DG(R60) DT(S12):DA(R59) DT(S13):DA(R58) DC(S14):DG(R57) DG(S15):DC(R56) DC(S16):DG(R55) DG(S17):DC(R54) DA(S18):DT(R53) chainA chainB (444) LYS479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 (446) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 chainE prot.sequence kevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqrrclhcgalngvvkkaaaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpggkvkpirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavktaetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepgtqmtlktfhasmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpegykaksistsakepsendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitrfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfesls/deintaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeKsRkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsadapnpnnvnvqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >6eu1_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE III - OPEN DNA COMPLEX (OC-POL3). organism=? DNA sequence DC(S1):DG(R70) DG(S2):DC(R69) DA(S3):DT(R68) DA(S4):DT(R67) DG(S5):DC(R66) DG(S6):DC(R65) DG(S7):DC(R64) DT(S8):DA(R63) DT(S9):DA(R62) DA(S10):DT(R61) DC(S11):DG(R60) DT(S12):DA(R59) DT(S13):DA(R58) DC(S14):DG(R57) DG(S15):DC(R56) DC(S16):DG(R55) DG(S17):DC(R54) DA(S18):DT(R53) chainB (444) LYS479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 (446) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 prot.sequence deintaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeKsRkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsadapnpnnvnvqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq >6evv_HL:Trypsin-like_serine_proteases; title=X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA THROMBIN AND NU172, A DUPLEX/QUADRUPLEX 26-MER DNA APTAMER, IN THE PRESENCE OF POTASSIUM IONS. organism=HOMO SAPIENS DNA sequence DC(E25) DG(E24) DG(E23) DT(E22) DG(E21) DG(E20) DC(E1) DG(E2) DC(E3) DC(E4) DT(E5) DA(E6) DG(E7) DC(E1):DG(E26) DG(E2):DC(E25) DC(E3):DG(E24) DC(E4):DG(E23) DT(E5):DA(E15) DA(E6):DT(E22) DG(E7):DG(E12) DG(E8):DG(E20) DT(E10) DT(E9) DG(E11):DG(E17) DT(E19) DG(E13):DG(E18) DT(E14) DG(E16):DG(E21) chainL chainH ( 9) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 ( 66) HIS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 70) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 30 5 11 0 0 ( 71) TYR76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 27 0 0 0 0 0 ( 72) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 ( 73) ARG77A 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 10 0 0 5 0 0 0 ( 74) ASN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 75) ILE79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 ( 78) ILE82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence ivegsdaeIgmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkHsrtRYeRNIekIsmlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfge/tfgsgeadCglrplfekksledkterellesyi >6exv_ABE: title=STRUCTURE OF MAMMALIAN RNA POLYMERASE II ELONGATION COMPLEX INHIBITED BY ALPHA-AMANITIN organism=SUS SCROFA DNA sequence DA(T2):DT(N42) DT(T3):DA(N41) DC(T4):DG(N40) DA(T5):DT(N39) DA(T6):DT(N38) DG(T7):DC(N37) DC(T8):DG(N36) DT(T9):DA(N35) DC(T10):DG(N34) DA(T11):DT(N33) DA(T12):DT(N32) DG(T13):DC(N31) DT(T14):DA(N30) DA(T15):DT(N29) DC(T16):DG(N28) DT(T17):DA(N27) DT(T18):DA(N26) DA(T19):DA(N25) DA(T20):DA(N13) DG(T21):DT(N12) DC(T22):DG(N11) DC(T23):DA(N10) DT(T24):DT(N9) DG(T25):DC(N8) DG(T26):DA(N7) chainA (418) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (810) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 (811) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (1357) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 chainB (430) LYS457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (465) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 chainE prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqKkahqaragvsqvlnrltfastlshlrrlnspigrDgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >6f40_ABEOPUVW:TATA-box_binding_protein-like;"Winged_helix"_DNA-binding_domain;NTF2-like;Homeodomain-like;Cyclin-like;Zinc_beta-ribbon; title=RNA POLYMERASE III OPEN COMPLEX organism=? DNA sequence DA(Y3):DT(X79) DA(Y4):DT(X78) DA(Y5):DT(X77) DT(Y6):DA(X76) DG(Y7):DC(X75) DT(Y8):DA(X74) DC(Y9):DG(X73) DC(Y10):DG(X72) DA(Y11):DT(X71) DC(Y12):DG(X70) DG(Y13):DC(X69) DA(Y14):DT(X68) DA(Y15):DT(X67) DG(Y16):DC(X66) DG(Y17):DC(X65) DT(Y19):DC(X64) DT(Y20):DA(X63) DA(Y21):DT(X61) DC(Y22):DG(X60) DG(Y42):DC(X40) DA(Y43):DT(X39) DA(Y44):DT(X38) DA(Y45):DT(X37) DA(Y46):DT(X36) DA(Y47):DT(X35) DA(Y48):DT(X34) DA(Y49):DT(X33) DC(Y50):DG(X32) DA(Y51):DT(X31) DT(Y52):DA(X30) DT(Y53):DA(X29) DT(Y54):DA(X28) DA(Y55):DT(X27) DT(Y56):DA(X26) DT(Y57):DA(X25) DT(Y58):DA(X24) DA(Y59):DT(X23) DT(Y60):DA(X22) DA(Y61):DT(X21) DG(Y62):DC(X20) DT(Y63):DA(X19) DA(Y64):DT(X18) DG(Y65):DC(X17) DC(Y66):DG(X16) DC(Y67):DG(X15) DG(Y68):DC(X14) DA(Y69):DT(X13) DA(Y70):DT(X12) DA(Y71):DT(X11) DA(Y72):DT(X10) DT(Y73):DA(X9) DA(Y74):DT(X8) DG(Y75):DC(X7) chainA (1321) ARG1373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (446) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) LYS482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainO chainP chainU ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainV ( 42) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) GLU253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainW ( 94) ARG413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) TYR416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 prot.sequence kevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqrrclhcgalngvvkkaaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpkpirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavktaetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfes/deintaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeksRKvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsadapnpnnvnvqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/dqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm/sleqrtlnpdlflykelvkahlgeraasvigmlvalgrlsvrelvekidgmdvdsvkttlvsltqlrcvkylqetaisgkkttyyyyneegihillysgliideiitqmrvndeeehkqlvaeivqnvislgsltvedylssvtsdsmkytisslfvqlcemgyliqisklhytpiedlwqflyekhykniprnsplsdlkkrsqakmnaktdfakiinkpnelsqiltvdpktslrivkptvsltinldrfmkgrrskqlinlaktrvgsvtaqvykialrlteqkspkirdpltqtgllqdleeaksfqdeaelveektpgltfnaidlarhlpsaslinshlkilassnfpflnetkpgvyyvpysklmpvlkssvyeyviastlgpsamrlsrcirdnklvsekiinstalmkekdirstlaslirynsveiqevprtadrSAsravflfrckethsynfmrqnlewnmanllfkkeklkqenstllkkanrddllpselnqlkmvnerelnvfarlsrllslwevfqma/lsdnaktlhsqmmskgigalftqqelqkqmgigsltdlmsivqelldknliklvkqndelkfqgvleseaqkkatmsaeealvysyieasgregiwsktikartnlhqhvvlkclkslesqryvksvksvkfptrkiymlyslqpsveldiefinslltivwrfisentqeilefitaaqvanveltpsnirslcevlvyddklekvthdcyrvtlesilqmifnyfkmfpaskhdkevvyfdewt/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmvvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm/pvcknchgteferdlsnanndlvckacgvvsednpivseleSreatlnnarrklravsyalhipeyitdaafqwyklalannfvQgrrsqnviasclyvacrkekthhmlidfssrlqvsvysigatflkmvkklhitelpladpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeEtlqqrlnefkntkaaklsvqkfrendvedgearppsfvknrkkecprnlhllpttdtylskvsddpdnledvddeelnahllneeasklkeriwiglnadflleqeskrlkqeadia/ckpnfpigqisenfekskmakkaklekrrhlrelrmrarqtaiqlklnpdgtmaideetmvvdrhknasieneykekvdenpfanlynygsygRgsYtdpwtveemikfykalsmwgtdfnlisqlypyrsrkqvkakfvneekkrpilielalrsklppnfdeycceikknigtvadfneklielqnehkhhmkeieeakntakeedqtaqrlndan >6f41_ABEPUVW:TATA-box_binding_protein-like;"Winged_helix"_DNA-binding_domain;NTF2-like;Homeodomain-like;Cyclin-like;Zinc_beta-ribbon; title=RNA POLYMERASE III INITIALLY TRANSCRIBING COMPLEX organism=? DNA sequence DC(X5):DG(Y77) DA(X6):DT(Y76) DC(X7):DG(Y75) DT(X8):DA(Y74) DA(X9):DT(Y73) DT(X10):DA(Y72) DT(X11):DA(Y71) DT(X12):DA(Y70) DT(X13):DA(Y69) DC(X14):DG(Y68) DG(X15):DC(Y67) DG(X16):DC(Y66) DC(X17):DG(Y65) DT(X18):DA(Y64) DA(X19):DT(Y63) DC(X20):DG(Y62) DT(X21):DA(Y61) DA(X22):DT(Y60) DT(X23):DA(Y59) DA(X24):DT(Y58) DA(X25):DT(Y57) DA(X26):DT(Y56) DT(X27):DA(Y55) DA(X28):DT(Y54) DA(X29):DT(Y53) DA(X30):DT(Y52) DT(X31):DA(Y51) DG(X32):DC(Y50) DT(X33):DA(Y49) DT(X34):DA(Y48) DT(X35):DA(Y47) DT(X36):DA(Y46) DT(X37):DA(Y45) DT(X38):DA(Y44) DT(X39):DA(Y43) DC(X40):DG(Y27) DG(X41):DG(Y26) DC(X42):DC(Y25) DA(X43):DT(Y24) DG(X44):DT(Y23) DG(X60):DC(Y22) DT(X61):DA(Y21) DA(X62):DT(Y20) DA(X63):DT(Y19) DC(X64):DG(Y18) DC(X65):DG(Y17) DC(X66):DG(Y16) DT(X67):DA(Y15) DT(X68):DA(Y14) DC(X69):DG(Y13) DG(X70):DC(Y12) DT(X71):DA(Y11) DG(X72):DC(Y10) DG(X73):DC(Y9) DA(X74):DT(Y8) DC(X75):DG(Y7) DA(X76):DT(Y6) DT(X77):DA(Y5) DT(X78):DA(Y4) chainA (458) PRO478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (859) THR879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (860) ALA880 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (278) ARG313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainP ( 96) TRP106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainV ( 42) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainW ( 97) TYR416 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqrrclhcgalngvvkkaaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpkpirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqPslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavkTAetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitrfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfes/deintaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmRrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeksRkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsadapnpnnvnvqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/dqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm/lsdnaktlhsqmmskgigalftqqelqkqmgigsltdlmsivqelldknliklvkqndelkfqgvleseaqkkatmsaeealvysyieasgregiWsktikartnlhqhvvlkclkslesqryvksvksvkfptrkiymlyslqpsveldiefinslltivwrfisentqeilefitaaqvanveltpsnirslcevlvyddklekvthdcyrvtlesilqmifnyfkmfpaskhdkevvyfdewt/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaliFasgkmvvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlliFvsgkiVlTgakqreeiyqafeaiypvlsefrkm/pvcknchgteferdlsnanndlvckacgvvsednpivseleSreatlnnarrklravsyalhipeyitdaafqwyklalannfvQgrrsqnviasclyvacrkekthhmlidfssrlqvsvysigatflkmvkklhitelpladpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeetlqqrlnefkntkaaklsvqkfrendvedgearppsfvknrkkecprnlhllpttdtylskvsddpdnledvddeelnahllneeasklkeriwiglnadflleqeskrlkqeadia/ckpnfpigqisenfekskmakkaklekrrhlrelrmrarqtaiqlklnpdgtmaideetmvvdrhknasieneykekvdenpfanlynygsygrgsYtdpwtveemikfykalsmwgtdfnlisqlypyrsrkqvkakfvneekkrpilielalrsklppnfdeycceikknigtvadfneklielqnehkhhmkeieeakntakeedqtaqrlndan >6f42_U:TATA-box_binding_protein-like; title=RNA POLYMERASE III CLOSED COMPLEX CC1. organism=? DNA sequence DA(Y34):DT(X48) DC(Y35):DG(X47) DT(Y36):DA(X46) DA(Y37):DT(X45) DT(Y38):DA(X44) DT(Y39):DA(X43) DG(Y40):DC(X42) DC(Y41):DG(X41) DG(Y42):DC(X40) DA(Y43):DT(X39) DA(Y44):DT(X38) DA(Y45):DT(X37) DA(Y46):DT(X36) DA(Y47):DT(X35) DA(Y48):DT(X34) DA(Y49):DT(X33) DC(Y50):DG(X32) DA(Y51):DT(X31) DT(Y52):DA(X30) DT(Y53):DA(X29) DT(Y54):DA(X28) DT(Y56):DA(X26) DT(Y57):DA(X25) DT(Y58):DA(X24) DA(Y59):DT(X23) DT(Y60):DA(X22) DA(Y61):DT(X21) DG(Y62):DC(X20) DT(Y63):DA(X19) DA(Y64):DT(X18) DG(Y65):DC(X17) DC(Y66):DG(X16) DC(Y67):DG(X15) DG(Y68):DC(X14) DA(Y69):DT(X13) DA(Y70):DT(X12) DA(Y71):DT(X11) DA(Y72):DT(X10) DT(Y73):DA(X9) DA(Y74):DT(X8) DG(Y75):DC(X7) DT(Y76):DA(X6) chainU ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttalifasgkmvvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm >6f42_UVW:TATA-box_binding_protein-like;"Winged_helix"_DNA-binding_domain;Homeodomain-like;Cyclin-like;Zinc_beta-ribbon; title=RNA POLYMERASE III CLOSED COMPLEX CC1. organism=? DNA sequence DA(X6):DT(Y76) DC(X7):DG(Y75) DT(X8):DA(Y74) DA(X9):DT(Y73) DT(X10):DA(Y72) DT(X11):DA(Y71) DT(X12):DA(Y70) DT(X13):DA(Y69) DC(X14):DG(Y68) DG(X15):DC(Y67) DG(X16):DC(Y66) DC(X17):DG(Y65) DT(X18):DA(Y64) DA(X19):DT(Y63) DC(X20):DG(Y62) DT(X21):DA(Y61) DA(X22):DT(Y60) DT(X23):DA(Y59) DA(X24):DT(Y58) DA(X25):DT(Y57) DA(X26):DT(Y56) DA(X28):DT(Y54) DA(X29):DT(Y53) DA(X30):DT(Y52) DT(X31):DA(Y51) DG(X32):DC(Y50) DT(X33):DA(Y49) DT(X34):DA(Y48) DT(X35):DA(Y47) DT(X36):DA(Y46) DT(X37):DA(Y45) DT(X38):DA(Y44) DT(X39):DA(Y43) DC(X40):DG(Y42) DG(X41):DC(Y41) DC(X42):DG(Y40) DA(X43):DT(Y39) DA(X44):DT(Y38) DT(X45):DA(Y37) DA(X46):DT(Y36) DG(X47):DC(Y35) DT(X48):DA(Y34) chainU ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainV ( 85) GLN118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) TYR155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) GLU253 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainW ( 28) ARG307 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) TYR416 0 0 0 0 0 0 0 0 0 0 6 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttalifasgkmvvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm/pvcknchgteferdlsnanndlvckacgvvsednpivselesreatlnnarrklravsyalhipeyitdaafqwyklalannfvQgrrsqnviasclyvacrkekthhmlidfssrlqvsvYsigatflkmvkklhitelpladpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeEtlqqrlnefkntkaaklsvqkfrendvedgearppsfvknrkkecprnlhllpttdtylskvsddpdnledvddeelnahllneeasklkeriwiglnadflleqeskrlkq/ckpnfpigqisenfekskmakkaklekRrhlrelrmrarqekvdenpfanlynygsygrgsYtdpwtveemikfykalsmwgtdfnlisqlypyrsrkqvkakfvneekkrpilielalrsklppnfdeycceikknigtvadfneklielqnehkhhmkeieea >6f44_BMOUVW:TATA-box_binding_protein-like;"Winged_helix"_DNA-binding_domain;Homeodomain-like;Cyclin-like;Zinc_beta-ribbon; title=RNA POLYMERASE III CLOSED COMPLEX CC2. organism=? DNA sequence DC(X5):DG(Y77) DA(X6):DT(Y76) DC(X7):DG(Y75) DT(X8):DA(Y74) DA(X9):DT(Y73) DT(X10):DA(Y72) DT(X11):DA(Y71) DT(X12):DA(Y70) DT(X13):DA(Y69) DC(X14):DG(Y68) DG(X15):DC(Y67) DG(X16):DC(Y66) DC(X17):DG(Y65) DT(X18):DA(Y64) DA(X19):DT(Y63) DC(X20):DG(Y62) DT(X21):DA(Y61) DA(X22):DT(Y60) DT(X23):DA(Y59) DA(X24):DT(Y58) DA(X25):DT(Y57) DA(X26):DT(Y56) DT(X27):DA(Y55) DA(X28):DT(Y54) DA(X29):DT(Y53) DA(X30):DT(Y52) DT(X31):DA(Y51) DG(X32):DC(Y50) DT(X33):DA(Y49) DT(X34):DA(Y48) DT(X35):DA(Y47) DT(X36):DA(Y46) DT(X37):DA(Y45) DT(X38):DA(Y44) DT(X39):DA(Y43) DC(X40):DG(Y42) DG(X41):DC(Y41) DC(X42):DG(Y40) DA(X43):DT(Y39) DA(X44):DT(Y38) DT(X45):DA(Y37) DA(X46):DT(Y36) DG(X47):DC(Y35) chainB chainM chainO chainU ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainV ( 85) GLN118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (220) GLU253 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainW ( 28) ARG307 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) TYR416 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence deintaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeksrkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsadapnpnnvnvqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/ieefplkisgeeeslhvfqyanrprlvgrkpaehpfisaarykpkshlweidipldeqafynkdkaesewngvnvqtlkgvgvenngqyaafvkdmqvylvpiervaqlkpffkyiddanvtrkqedarrppnprltgsllahkvadeeanieltwaegtfeqfkdtivke/sleqrtlnpdlflykelvkahlgeraasvigmlvalgrlsvrelvekidgmdvdsvkttlvsltqlrcvkylqetaisgkkttyyyyneegihillysgliideiitqmrvndeeehkqlvaeivqnvislgsltvedylssvtsdsmkytisslfvqlcemgyliqisklhytpiedlwqflyekhykniprnsplsdlkkrsqakmnaktdfakiinkpnelsqiltvdpktslrivkptvsltinldrfmkgrrskqlinlaktrvgsvtaqvykialrlteqkspkirdpltqtgllqdleeaksfqdeaelveektpgltfnaidlarhlpsaslinshlkilassnfpflnetkpgvyyvpysklmpvlkssvyeyviastlgpsamrlsrcirdnklvsekiinstalmkekdirstlaslirynsveiqevprtadrsasravflfrckethsynfmrqnlewnmanllfkkeklkqenstllkkanrddllpselnqlkmvnerelnvfarlsrllslwevfqma/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaliFasgkmvvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlliFvsgkiVlTgakqreeiyqafeaiypvlsefrkm/pvcknchgteferdlsnanndlvckacgvvsednpivselesreatlnnarrklravsyalhipeyitdaafqwyklalannfvQgrrsqnviasclyvacrkekthhmlidfssrlqvsvysigatflkmvkklhitelpladpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeEtlqqrlnefkntkaaklsvqkfrendvedgearppsfvknrkkecprnlhllpttdtylskvsddpdnledvddeelnahllneeasklkeriwiglnadflleqeskrlkqeadia/ckpnfpigqisenfekskmakkaklekRrhlrelrmrarqknasieneykekvdenpfanlynygsygrgsYtdpwtveemikfykalsmwgtdfnlisqlypyrsrkqvkakfvneekkrpilielalrsklppnfdeycceikknigtvadfneklielqnehkhhmkei >6f57_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3A-DNMT3L IN COMPLEX WITH SINGLE CPG- CONTAINING DNA organism=HOMO SAPIENS DNA sequence DA(E403):DT(F432) DG(E404):DC(F431) DA(E405):DT(F430) DG(E406):DC(F429) DC(E407):DG(F428) DC(E409):DG(F426) DA(E410):DT(F425) DT(E411):DA(F424) DG(E412):DC(F423) chainA ( 88) ILE715 0 0 0 0 0 5 4 0 0 ( 89) VAL716 0 0 0 0 8 7 0 0 0 ( 90) ASN717 0 0 0 0 1 0 0 0 0 ( 91) PRO718 0 0 0 0 6 0 0 0 0 (207) THR834 0 0 0 0 2 0 0 0 0 (209) ARG836 0 0 3 14 15 0 0 0 0 (210) SER837 0 4 0 0 0 0 0 0 0 (211) ASN838 0 0 6 0 0 0 0 0 0 (256) LEU883 3 1 0 0 0 0 0 0 0 prot.sequence aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVNParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTtRSNsikqgkdqhfpvfmnekedilwctemervfgfpvhytdvsnmsrLarqrllgrswsvpvirhlfaplkeyfacv >6f58_A:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN BRACHYURY (T) IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DA(D1):DT(C24) DA(D2):DT(C23) DT(D3):DA(C22) DT(D4):DA(C21) DT(D5):DA(C20) DC(D6):DG(C19) DA(D7):DT(C18) DC(D8):DG(C17) DA(D9):DT(C16) DC(D10):DG(C15) DC(D11):DG(C14) DT(D12):DA(C13) DA(D13):DT(C12) DG(D14):DC(C11) DG(D15):DC(C10) DT(D16):DA(C9) DG(D17):DC(C8) DT(D18):DA(C7) DG(D19):DC(C6) DA(D20):DT(C5) DA(D21):DT(C4) DA(D22):DT(C3) DT(D23):DA(C2) chainA ( 30) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 (151) THR196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 (152) ALA197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (168) PHE213 0 0 0 0 0 0 0 0 0 0 0 0 5 2 3 0 0 0 0 0 0 0 0 (172) PHE217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 prot.sequence gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFldakersh >6f58_AB:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN BRACHYURY (T) IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DA(C2):DT(D23) DT(C3):DA(D22) DT(C4):DA(D21) DT(C5):DA(D20) DC(C6):DG(D19) DA(C7):DT(D18) DC(C8):DG(D17) DA(C9):DT(D16) DC(C10):DG(D15) DC(C11):DG(D14) DT(C12):DA(D13) DA(C13):DT(D12) DG(C14):DC(D11) DG(C15):DC(D10) DT(C16):DA(D9) DG(C17):DC(D8) DT(C18):DA(D7) DG(C19):DC(D6) DA(C20):DT(D5) DA(C21):DT(D4) DA(C22):DT(D3) DT(C23):DA(D2) DT(C24):DA(D1) chainA ( 30) ARG69 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) THR196 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) ALA197 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) PHE213 0 0 0 0 0 0 0 0 3 2 5 0 0 0 0 0 0 0 0 0 0 0 0 (172) PHE217 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 30) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 (151) THR196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 (152) ALA197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (168) PHE213 0 0 0 0 0 0 0 0 0 0 0 2 2 3 0 0 0 0 0 0 0 0 0 (172) PHE217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 prot.sequence gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFldakersh/gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFlda >6f59_AB:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN BRACHYURY (T) G177D VARIANT IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(C1):DC(D26) DA(C2):DT(D25) DA(C3):DT(D24) DT(C4):DA(D23) DT(C5):DA(D22) DT(C6):DA(D21) DC(C7):DG(D20) DA(C8):DT(D19) DC(C9):DG(D18) DA(C10):DT(D17) DC(C11):DG(D16) DC(C12):DG(D15) DT(C13):DA(D14) DA(C14):DT(D13) DG(C15):DC(D12) DG(C16):DC(D11) DT(C17):DA(D10) DG(C18):DC(D9) DT(C19):DA(D8) DG(C20):DC(D7) DA(C21):DT(D6) DA(C22):DT(D5) DA(C23):DT(D4) DT(C24):DA(D3) DT(C25):DA(D2) DC(C26):DG(D1) chainA ( 29) ARG69 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) THR196 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ALA197 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) PHE213 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) PHE217 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 30) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 (157) THR196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 (158) ALA197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (174) PHE213 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 3 0 0 0 0 0 0 0 0 0 0 (177) ALA216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (178) PHE217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 prot.sequence elrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpqapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvgdpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFldakers/gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpggkpepqapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvgdpqrmitshcfpetqfiavTAyqneeitalkikynpFakAFldakers >6f59_B:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN BRACHYURY (T) G177D VARIANT IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(D1):DC(C26) DA(D2):DT(C25) DA(D3):DT(C24) DT(D4):DA(C23) DT(D5):DA(C22) DT(D6):DA(C21) DC(D7):DG(C20) DA(D8):DT(C19) DC(D9):DG(C18) DA(D10):DT(C17) DC(D11):DG(C16) DC(D12):DG(C15) DT(D13):DA(C14) DA(D14):DT(C13) DG(D15):DC(C12) DG(D16):DC(C11) DT(D17):DA(C10) DG(D18):DC(C9) DT(D19):DA(C8) DG(D20):DC(C7) DA(D21):DT(C6) DA(D22):DT(C5) DA(D23):DT(C4) DT(D24):DA(C3) DT(D25):DA(C2) DC(D26):DG(C1) chainB ( 30) ARG69 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) THR196 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) ALA197 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) PHE213 0 0 0 0 0 0 0 0 0 0 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ALA216 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) PHE217 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpggkpepqapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvgdpqrmitshcfpetqfiavTAyqneeitalkikynpFakAFldakers >6f5b_A:WGR_domain-like; title=STRUCTURE OF ARTD2/PARP2 WGR DOMAIN BOUND TO DOUBLE STRANDED DNA WITH 5'PHOSPHATE organism=HOMO SAPIENS DNA sequence DG(E1):DC(F10) DC(E2):DG(F9) DC(E3):DG(F8) DT(E4):DA(F7) DA(E5):DT(F6) DT(E6):DA(F5) DA(E7):DT(F4) DG(E8):DC(F3) DG(E9):DC(F2) DC(E10):DG(F1) DG(C1):DC(D10) DC(C2):DG(D9) DC(C3):DG(D8) DT(C4):DA(D7) DA(C5):DT(D6) DT(C6):DA(D5) DA(C7):DT(D4) DG(C8):DC(D3) DG(C9):DC(D2) DC(C10):DG(D1) chainA ( 68) GLN159 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 prot.sequence apvdpectakvgkahvycegndvydvmlnqtnlqfnnnkyyliqlleddaqrnfsvwmrwgrvgkmgQhslvacsgnlnkakeifqkkfldktknnwedrekfekvpgkydmlq >6f5b_AB: title=STRUCTURE OF ARTD2/PARP2 WGR DOMAIN BOUND TO DOUBLE STRANDED DNA WITH 5'PHOSPHATE organism=HOMO SAPIENS DNA sequence DG(D1):DC(C10) DC(D2):DG(C9) DC(D3):DG(C8) DT(D4):DA(C7) DA(D5):DT(C6) DT(D6):DA(C5) DA(D7):DT(C4) DG(D8):DC(C3) DG(D9):DC(C2) DC(D10):DG(C1) DG(F1):DC(E10) DC(F2):DG(E9) DC(F3):DG(E8) DT(F4):DA(E7) DA(F5):DT(E6) DT(F6):DA(E5) DA(F7):DT(E4) DG(F8):DC(E3) DG(F9):DC(E2) DC(F10):DG(E1) chainA ( 68) GLN159 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 chainB ( 68) GLN159 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 prot.sequence apvdpectakvgkahvycegndvydvmlnqtnlqfnnnkyyliqlleddaqrnfsvwmrwgrvgkmgQhslvacsgnlnkakeifqkkfldktknnwedrekfekvpgkydmlq/apvdpectakvgkahvycegndvydvmlnqtnlqfnnnkyyliqlleddaqrnfsvwmrwgrvgkmgQhslvacsgnlnkakeifqkkfldktknnwedrekfekvpgkydml >6fas_B:DNA-binding_pseudobarrel_domain; title=CRYSTAL STRUCTURE OF VAL1 B3 DOMAIN IN COMPLEX WITH COGNATE DNA organism=Arabidopsis thaliana DNA sequence DC(F1):DG(E12) DG(F2):DC(E11) DG(F3):DC(E10) DT(F4):DA(E9) DG(F5):DC(E8) DC(F6):DG(E7) DA(F7):DT(E6) DT(F8):DA(E5) DG(F9):DC(E4) DG(F10):DC(E3) DC(F11):DG(E2) DT(F12):DA(E1) chainB ( 16) SER302 0 0 0 0 0 0 3 0 0 0 0 0 ( 21) ILE307 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ARG309 0 0 0 5 14 2 0 0 0 0 0 0 ( 25) VAL311 0 0 0 0 0 0 1 0 0 0 0 0 ( 62) TRP349 0 0 0 0 5 24 3 0 0 0 0 0 ( 64) ASN351 0 0 0 0 0 0 5 9 9 0 0 0 ( 65) ASN352 0 0 0 0 0 0 0 3 0 0 0 0 ( 69) MET356 0 0 0 0 0 0 5 7 5 0 0 0 prot.sequence mnlnivplfektlsaSdagrIgRlVlpkaaeayfppisqsegiplkiqdvrgrewtfqfryWpNNnsrMyvlegvtpciqsmmlqagdtvtfsrvdpggklimgsrkaa >6fb0_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) IN THE PRESENCE OF CALCIUM organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(F601):DA(D524) DC(F602):DG(D523) DT(F603):DA(D522) DG(F604):DC(D521) DA(F605):DT(D520) DC(F606):DG(D519) DT(F607):DA(D518) DC(F608):DG(D517) DC(F609):DG(D516) DT(F610):DA(D515) DG(F611):DC(D514) DT(F612):DA(D513) DG(F613):DC(D512) DG(F614):DC(D511) DA(F615):DT(D510) DG(F616):DC(D509) DA(F617):DT(D508) DA(F618):DT(D507) DG(F619):DC(D506) DT(F620):DA(D505) DC(F621):DG(D504) DT(F622):DA(D503) DG(F623):DC(D502) DA(F624):DT(D501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 2 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG38 0 0 16 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN40 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ASP44 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ALA68 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LYS75 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG77 0 0 0 0 0 0 2 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdsdgSiIaQiKpNqSvkfkhRlQltfDvTqktqrrwfldklvdeigvgYvAdSgsVsKyRlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlds >6fb0_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) IN THE PRESENCE OF CALCIUM organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(F601):DA(D524) DC(F602):DG(D523) DT(F603):DA(D522) DG(F604):DC(D521) DA(F605):DT(D520) DC(F606):DG(D519) DT(F607):DA(D518) DC(F608):DG(D517) DC(F609):DG(D516) DT(F610):DA(D515) DG(F611):DC(D514) DT(F612):DA(D513) DG(F613):DC(D512) DG(F614):DC(D511) DA(F615):DT(D510) DG(F616):DC(D509) DA(F617):DT(D508) DA(F618):DT(D507) DG(F619):DC(D506) DT(F620):DA(D505) DC(F621):DG(D504) DT(F622):DA(D503) DG(F623):DC(D502) DA(F624):DT(D501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 2 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG38 0 0 16 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN40 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ASP44 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ALA68 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LYS75 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG77 0 0 0 0 0 0 2 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 ( 37) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 ( 43) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 ( 76) TYR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdsdgSiIaQiKpNqSvkfkhRlQltfDvTqktqrrwfldklvdeigvgYvAdSgsVsKyRlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlds/ntkynkefllylagfvdgdgSiIaQiKpnqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgsVsNyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl >6fb0_B:Homing_endonucleases; title=CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) IN THE PRESENCE OF CALCIUM organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(D501):DA(F624) DC(D502):DG(F623) DA(D503):DT(F622) DG(D504):DC(F621) DA(D505):DT(F620) DC(D506):DG(F619) DT(D507):DA(F618) DT(D508):DA(F617) DC(D509):DG(F616) DT(D510):DA(F615) DC(D511):DG(F614) DC(D512):DG(F613) DA(D513):DT(F612) DC(D514):DG(F611) DA(D515):DT(F610) DG(D516):DC(F609) DG(D517):DC(F608) DA(D518):DT(F607) DG(D519):DC(F606) DT(D520):DA(F605) DC(D521):DG(F604) DA(D522):DT(F603) DG(D523):DC(F602) DA(D524):DT(F601) chainB ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS38 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS44 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) TYR77 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpnqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgsVsNyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl >6fb1_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) IN THE PRESENCE OF MAGNESIUM organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(F601):DA(E524) DC(F602):DG(E523) DT(F603):DA(E522) DG(F604):DC(E521) DA(F605):DT(E520) DC(F606):DG(E519) DT(F607):DA(E518) DC(F608):DG(E517) DC(F609):DG(E516) DT(F610):DA(E515) DG(F611):DC(D514) DT(F612):DA(D513) DG(F613):DC(D512) DG(F614):DC(D511) DA(G615):DT(D510) DG(G616):DC(D509) DA(G617):DT(D508) DA(G618):DT(D507) DG(G619):DC(D506) DT(G620):DA(D505) DC(G621):DG(D504) DT(G622):DA(D503) DG(G623):DC(D502) DA(G624):DT(D501) chainA ( 23) ILE24 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG38 0 0 4 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ASP44 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ALA68 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LYS75 0 0 0 0 0 0 0 1 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG77 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 ( 37) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 ( 43) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 76) TYR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdsdgsiIaQiKpNqSvkfkhRlqltfDvTqktqrrwfldklvdeigvgYvAdSgsVsKyRlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravlds/ntkynkefllylagfvdgdgSiIaQiKpNqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgsVsnyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl >6fb1_B:Homing_endonucleases; title=CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) IN THE PRESENCE OF MAGNESIUM organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(D501):DA(G624) DC(D502):DG(G623) DA(D503):DT(G622) DG(D504):DC(G621) DA(D505):DT(G620) DC(D506):DG(G619) DT(D507):DA(G618) DT(D508):DA(G617) DC(D509):DG(G616) DT(D510):DA(G615) DC(D511):DG(F614) DC(D512):DG(F613) DA(D513):DT(F612) DC(D514):DG(F611) DA(E515):DT(F610) DG(E516):DC(F609) DG(E517):DC(F608) DA(E518):DT(F607) DG(E519):DC(F606) DT(E520):DA(F605) DC(E521):DG(F604) DA(E522):DT(F603) DG(E523):DC(F602) DA(E524):DT(F601) chainB ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS38 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS44 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) TYR77 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgsVsnyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl >6fb2_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) IN THE PRESENCE OF MANGANESE organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(D501):DA(G624) DC(D502):DG(G623) DA(D503):DT(G622) DG(D504):DC(G621) DA(D505):DT(G620) DC(D506):DG(G619) DT(D507):DA(G618) DT(D508):DA(G617) DC(D509):DG(G616) DT(D510):DA(G615) DC(D511):DG(F614) DC(D512):DG(F613) DA(D513):DT(F612) DC(D514):DG(F611) DA(E515):DT(F610) DG(E516):DC(F609) DG(E517):DC(F608) DA(E518):DT(F607) DG(E519):DC(F606) DT(E520):DA(F605) DC(E521):DG(F604) DA(E522):DT(F603) DG(E523):DC(F602) DA(E524):DT(F601) chainA ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 1 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 37) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 9 0 0 ( 39) GLN40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 ( 43) ASP44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 ( 67) ALA68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 ( 74) LYS75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 ( 76) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 5 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS38 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS44 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) TYR77 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdsdgsiIaQiKpNqSvkfkhRlQltfDvTqktqrrwfldklvdeigvgYvAdSgsVsKyRlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravlds/ntkynkefllylagfvdgdgSiIaQiKpnqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgsVsnyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl >6fb2_B:Homing_endonucleases; title=CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) IN THE PRESENCE OF MANGANESE organism=? DNA sequence DT(D501):DA(G624) DC(D502):DG(G623) DA(D503):DT(G622) DG(D504):DC(G621) DA(D505):DT(G620) DC(D506):DG(G619) DT(D507):DA(G618) DT(D508):DA(G617) DC(D509):DG(G616) DT(D510):DA(G615) DC(D511):DG(F614) DC(D512):DG(F613) DA(D513):DT(F612) DC(D514):DG(F611) DA(E515):DT(F610) DG(E516):DC(F609) DG(E517):DC(F608) DA(E518):DT(F607) DG(E519):DC(F606) DT(E520):DA(F605) DC(E521):DG(F604) DA(E522):DT(F603) DG(E523):DC(F602) DA(E524):DT(F601) chainB ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS38 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS44 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) TYR77 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpnqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgsVsnyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl >6fb5_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) AT 5NNN REGION IN THE PRESENCE OF MAGNESIUM organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(F601):DA(D524) DC(F602):DG(D523) DT(F603):DA(D522) DG(F604):DC(D521) DA(F605):DT(D520) DC(F606):DG(D519) DT(F607):DA(D518) DC(F608):DG(D517) DC(F609):DG(D516) DT(F610):DA(D515) DG(F611):DC(D514) DT(F612):DA(D513) DG(F613):DC(D512) DG(F614):DC(D511) DA(F615):DT(D510) DC(F616):DG(D509) DA(F617):DT(D508) DA(F618):DT(D507) DG(F619):DC(D506) DT(F620):DA(D505) DC(F621):DG(D504) DT(F622):DA(D503) DG(F623):DC(D502) DA(F624):DT(D501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 2 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG38 0 0 12 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN40 0 0 0 6 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ASP44 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ALA68 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LYS75 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG77 0 0 0 0 0 0 6 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 0 0 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 ( 37) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 ( 43) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 ( 76) TYR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdsdgSiIaQiKpNqSvkfkhRlQltfDvTqktqrrwfldklvdeigvgYvAdSgsVsKyRlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravlds/ntkynkefllylagfvdgdgSiIaQiKpnqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgSVsNyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl >6fb5_B:Homing_endonucleases; title=CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) AT 5NNN REGION IN THE PRESENCE OF MAGNESIUM organism=? DNA sequence DT(F601):DA(D524) DC(F602):DG(D523) DT(F603):DA(D522) DG(F604):DC(D521) DA(F605):DT(D520) DC(F606):DG(D519) DT(F607):DA(D518) DC(F608):DG(D517) DC(F609):DG(D516) DT(F610):DA(D515) DG(F611):DC(D514) DT(F612):DA(D513) DG(F613):DC(D512) DG(F614):DC(D511) DA(F615):DT(D510) DC(F616):DG(D509) DA(F617):DT(D508) DA(F618):DT(D507) DG(F619):DC(D506) DT(F620):DA(D505) DC(F621):DG(D504) DT(F622):DA(D503) DG(F623):DC(D502) DA(F624):DT(D501) chainB ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 0 0 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 ( 37) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 ( 43) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 ( 76) TYR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpnqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgSVsNyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl >6fb6_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) AT 5NNN REGION IN THE PRESENCE OF MANGANESE organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(D501):DA(G624) DC(D502):DG(G623) DA(D503):DT(G622) DG(D504):DC(G621) DA(D505):DT(G620) DC(D506):DG(G619) DT(D507):DA(G618) DT(D508):DA(G617) DG(D509):DC(G616) DT(D510):DA(G615) DC(D511):DG(F614) DC(D512):DG(F613) DA(D513):DT(F612) DC(D514):DG(F611) DG(E515):DT(F610) DG(E516):DC(F609) DG(E517):DC(F608) DA(E518):DT(F607) DG(E519):DC(F606) DT(E520):DA(F605) DC(E521):DG(F604) DA(E522):DT(F603) DG(E523):DC(F602) DA(E524):DT(F601) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 2 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 37) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 16 0 0 ( 39) GLN40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 4 0 0 0 ( 43) ASP44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 ( 65) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 ( 67) ALA68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 74) LYS75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 ( 76) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 6 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 chainB ( 23) ILE24 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS38 0 0 8 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS44 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) TYR77 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdsdgSiIaQiKpNqSvkfkhRlQltfDvTqktqrrwfldklvdeigvgYvAdSgsVsKyRlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravlds/ntkynkefllylagfvdgdgsiIaQiKpNqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgsVsnyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl >6fb6_B:Homing_endonucleases; title=CRYSTAL STRUCTURE OF A TAILORED I-CREI HOMING ENDONUCLEASE PROTEIN (3115 VARIANT) IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA (HAEMOGLOBIN BETA SUBUNIT GENE) AT 5NNN REGION IN THE PRESENCE OF MANGANESE organism=CHLAMYDOMONAS REINHARDTII DNA sequence DT(D501):DA(G624) DC(D502):DG(G623) DA(D503):DT(G622) DG(D504):DC(G621) DA(D505):DT(G620) DC(D506):DG(G619) DT(D507):DA(G618) DT(D508):DA(G617) DG(D509):DC(G616) DT(D510):DA(G615) DC(D511):DG(F614) DC(D512):DG(F613) DA(D513):DT(F612) DC(D514):DG(F611) DG(E515):DT(F610) DG(E516):DC(F609) DG(E517):DC(F608) DA(E518):DT(F607) DG(E519):DC(F606) DT(E520):DA(F605) DC(E521):DG(F604) DA(E522):DT(F603) DG(E523):DC(F602) DA(E524):DT(F601) chainB ( 23) ILE24 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS38 0 0 8 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS44 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) TYR68 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) TYR77 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgsiIaQiKpNqSgkfkhKlsltfKvTqktqrrwfldklvdeigvgyvYdSgsVsnyYlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqvaalndsKTrkttsetvravldsl >6fb7_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE I-CREI HOMING ENDONUCLEASE D75N VARIANT IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF MANGANESE organism=Chlamydomonas reinhardtii DNA sequence DT(D501):DA(G624) DC(D502):DG(G623) DA(D503):DT(G622) DA(D504):DT(G621) DA(D505):DT(G620) DA(D506):DT(G619) DC(D507):DG(G618) DG(D508):DC(G617) DT(D509):DA(G616) DC(D510):DG(G615) DG(D511):DC(F614) DT(D512):DA(F613) DA(D513):DT(F612) DC(D514):DG(F611) DG(E515):DC(F610) DA(E516):DT(F609) DC(E517):DG(F608) DG(E518):DC(F607) DT(E519):DA(F606) DT(E520):DA(F605) DT(E521):DA(F604) DT(E522):DA(F603) DG(E523):DC(F602) DA(E524):DT(F601) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 1 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 2 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 11 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld >6fb7_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE I-CREI HOMING ENDONUCLEASE D75N VARIANT IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF MANGANESE organism=Chlamydomonas reinhardtii DNA sequence DT(D501):DA(G624) DC(D502):DG(G623) DA(D503):DT(G622) DA(D504):DT(G621) DA(D505):DT(G620) DA(D506):DT(G619) DC(D507):DG(G618) DG(D508):DC(G617) DT(D509):DA(G616) DC(D510):DG(G615) DG(D511):DC(F614) DT(D512):DA(F613) DA(D513):DT(F612) DC(D514):DG(F611) DG(E515):DC(F610) DA(E516):DT(F609) DC(E517):DG(F608) DG(E518):DC(F607) DT(E519):DA(F606) DT(E520):DA(F605) DT(E521):DA(F604) DT(E522):DA(F603) DG(E523):DC(F602) DA(E524):DT(F601) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 1 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 2 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 11 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainB ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 3 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 14 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 4 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndskTrkttsetvravld/ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld >6fb8_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE I-CREI HOMING ENDONUCLEASE D75N VARIANT IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA AT 5NNN REGION IN THE PRESENCE OF MAGNESIUM organism=Chlamydomonas reinhardtii DNA sequence DT(C501):DA(D624) DC(C502):DG(D623) DA(C503):DT(D622) DA(C504):DT(D621) DA(C505):DT(D620) DA(C506):DT(D619) DC(C507):DG(D618) DT(C508):DA(D617) DG(C509):DC(D616) DC(C510):DG(D615) DG(C511):DC(D614) DT(C512):DA(D613) DA(C513):DT(D612) DC(C514):DG(D611) DG(C515):DC(D610) DA(C516):DT(D609) DC(C517):DG(D608) DG(C518):DC(D607) DT(C519):DA(D606) DT(C520):DA(D605) DT(C521):DA(D604) DT(C522):DA(D603) DG(C523):DC(D602) DA(C524):DT(D601) chainA ( 21) SER22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 3 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 9 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 3 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 24 16 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravldaa >6fb8_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE I-CREI HOMING ENDONUCLEASE D75N VARIANT IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA AT 5NNN REGION IN THE PRESENCE OF MAGNESIUM organism=Chlamydomonas reinhardtii DNA sequence DT(D601):DA(C524) DC(D602):DG(C523) DA(D603):DT(C522) DA(D604):DT(C521) DA(D605):DT(C520) DA(D606):DT(C519) DC(D607):DG(C518) DG(D608):DC(C517) DT(D609):DA(C516) DC(D610):DG(C515) DG(D611):DC(C514) DT(D612):DA(C513) DA(D613):DT(C512) DC(D614):DG(C511) DG(D615):DC(C510) DC(D616):DG(C509) DA(D617):DT(C508) DG(D618):DC(C507) DT(D619):DA(C506) DT(D620):DA(C505) DT(D621):DA(C504) DT(D622):DA(C503) DG(D623):DC(C502) DA(D624):DT(C501) chainA ( 21) SER22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 3 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 9 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 3 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 16 24 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 chainB ( 21) SER222 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ILE224 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN226 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS228 0 0 0 0 3 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN230 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER232 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR233 0 10 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN238 0 0 4 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN244 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR246 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG268 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG270 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL273 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS339 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR340 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravldaa/ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlda >6fb9_A:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE I-CREI HOMING ENDONUCLEASE D75N VARIANT IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA AT 5NNN REGION IN THE PRESENCE OF MANGANESE organism=Chlamydomonas reinhardtii DNA sequence DT(E601):DA(D524) DC(E602):DG(D523) DA(E603):DT(D522) DA(E604):DT(D521) DA(E605):DT(D520) DA(E606):DT(D519) DC(E607):DG(D518) DG(E608):DC(D517) DT(E609):DA(D516) DC(E610):DG(D515) DG(E611):DC(C514) DT(E612):DA(C513) DA(E613):DT(C512) DC(E614):DG(C511) DG(F615):DC(C510) DC(F616):DG(C509) DA(F617):DT(C508) DG(F618):DC(C507) DT(F619):DA(C506) DT(F620):DA(C505) DT(F621):DA(C504) DT(F622):DA(C503) DG(F623):DC(C502) DA(F624):DT(C501) chainA ( 23) ILE24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 3 0 0 0 0 ( 29) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 ( 31) SER32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 ( 32) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 14 0 ( 37) GLN38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 3 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 18 25 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgsiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravldaa >6fb9_AB:Homing_endonucleases; title=CRYSTAL STRUCTURE OF THE I-CREI HOMING ENDONUCLEASE D75N VARIANT IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA AT 5NNN REGION IN THE PRESENCE OF MANGANESE organism=Chlamydomonas reinhardtii DNA sequence DT(C501):DA(F624) DC(C502):DG(F623) DA(C503):DT(F622) DA(C504):DT(F621) DA(C505):DT(F620) DA(C506):DT(F619) DC(C507):DG(F618) DT(C508):DA(F617) DG(C509):DC(F616) DC(C510):DG(F615) DG(C511):DC(E614) DT(C512):DA(E613) DA(C513):DT(E612) DC(C514):DG(E611) DG(D515):DC(E610) DA(D516):DT(E609) DC(D517):DG(E608) DG(D518):DC(E607) DT(D519):DA(E606) DT(D520):DA(E605) DT(D521):DA(E604) DT(D522):DA(E603) DG(D523):DC(E602) DA(D524):DT(E601) chainA ( 23) ILE24 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS28 0 0 0 0 3 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN30 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER32 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR33 0 14 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN38 0 0 3 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLN44 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR46 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG70 0 0 0 0 0 0 0 25 18 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) VAL73 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS139 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR140 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ILE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 25) GLN226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 ( 27) LYS228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 3 0 0 0 0 ( 29) ASN230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 31) SER232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 ( 32) TYR233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 11 0 ( 37) GLN238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 4 0 0 ( 43) GLN244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 ( 45) THR246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 67) ARG268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 ( 69) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 ( 72) VAL273 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence ntkynkefllylagfvdgdgsiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravldaa/ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsktrkttsetvravlda >6fbc_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KLENTAQ DNA POLYMERASE PROCESSING A MODIFIED PRIMER - BEARING THE MODIFICATION AT THE 3'-TERMINUS OF THE PRIMER. organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DC(B110):DG(C207) DA(B111):DT(C206) chainA (248) LYS540 0 0 0 0 0 0 0 4 5 0 0 (281) ARG573 0 0 0 0 0 0 0 0 0 0 2 (288) ASN580 0 0 0 0 0 0 0 0 0 1 0 (291) ASN583 0 0 0 0 0 0 0 0 2 7 1 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >6fbd_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KLENTAQ DNA POLYMERASE PROCESSING A MODIFIED PRIMER - BEARING THE MODIFICATION UPSTREAM AT THE SECOND PRIMER NUCLEOTIDE. organism=Thermus aquaticus DNA sequence DG(C206):DC(B112) DT(C207):DA(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 1 5 4 0 0 0 0 0 0 0 (280) ARG573 11 0 0 0 0 0 0 0 0 0 0 (290) ASN583 0 6 2 0 0 0 0 0 0 0 0 (370) LYS663 1 0 0 0 0 0 0 0 0 0 0 (491) HIS784 2 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaKtinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >6fbe_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KLENTAQ DNA POLYMERASE PROCESSING A MODIFIED PRIMER - BEARING THE MODIFICATION UPSTREAM AT THE THIRD PRIMER NUCLEOTIDE. organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DC(B108):DG(C209) DA(B109):DT(C208) DC(B111):DG(C207) DC(B112):DG(C206) chainA (247) LYS540 0 0 0 0 0 0 0 3 6 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 0 9 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 (290) ASN583 0 0 0 0 0 0 0 0 1 4 0 (370) LYS663 0 0 0 0 0 0 0 0 0 0 4 (461) GLN754 0 0 0 0 0 0 0 0 0 0 1 (491) HIS784 0 0 0 0 0 0 0 0 0 0 1 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaKtinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >6fbf_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KLENTAQ DNA POLYMERASE PROCESSING A MODIFIED PRIMER - BEARING THE MODIFICATION UPSTREAM AT THE FOURTH PRIMER NUCLEOTIDE. organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DG(B106):DC(C211) DC(B107):DG(C210) DA(B108):DT(C209) DC(B110):DG(C208) DG(B111):DG(C207) DC(B112):DC(C206) chainA (247) LYS540 0 0 0 0 0 0 0 3 1 0 0 (252) TYR545 0 0 0 0 0 0 0 0 1 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 1 7 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 (290) ASN583 0 0 0 0 0 0 0 0 7 3 0 (367) ARG660 0 0 0 0 0 0 0 0 0 0 7 (491) HIS784 0 0 0 0 0 0 0 0 0 1 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlkstYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrRaaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsak >6fbg_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KLENTAQ DNA POLYMERASE PROCESSING A MODIFIED PRIMER - BEARING THE MODIFICATION UPSTREAM AT THE FIFTH PRIMER NUCLEOTIDE. organism=Thermus aquaticus DNA sequence DC(C206):DC(B112) DC(C207):DG(B111) DG(C208):DG(B110) DG(C209):DC(B109) DT(C210):DA(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 1 8 0 0 0 0 0 0 0 (280) ARG573 7 1 0 0 0 0 0 0 0 0 0 (287) ASN580 0 0 1 0 0 0 0 0 0 0 0 (290) ASN583 0 1 11 0 0 0 0 0 0 0 0 (370) LYS663 4 0 0 0 0 0 0 0 0 0 0 (491) HIS784 0 1 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaKtinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsak >6fbh_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KLENTAQ DNA POLYMERASE PROCESSING A MODIFIED PRIMER - BEARING THE MODIFICATION UPSTREAM AT THE SIXTH PRIMER NUCLEOTIDE. organism=Thermus aquaticus DNA sequence DG(C205):DC(B112) DT(C206):DA(B111) DC(C207):DG(B110) DC(C208):DG(B109) DG(C209):DC(B108) DG(C210):DA(B106) DT(C211):DC(B105) DG(C212):DC(B104) DG(C213):DC(B103) DG(C214):DA(B102) DT(C215):DG(B101) chainA (247) LYS540 0 0 0 6 4 0 0 0 0 0 0 (280) ARG573 8 2 0 0 0 0 0 0 0 0 0 (287) ASN580 0 0 1 0 0 0 0 0 0 0 0 (290) ASN583 0 1 10 2 0 0 0 0 0 0 0 (367) ARG660 5 0 0 0 0 0 0 0 0 0 0 (461) GLN754 4 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrRaaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >6fbi_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KLENTAQ DNA POLYMERASE IN A CLOSED, TERNARY COMPLEX WITH DGPNHPP BOUND IN THE ACTIVE SITE organism=Thermus aquaticus DNA sequence DG(C205):DC(B112) DT(C206):DA(B111) DG(C207):DC(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 0 6 4 0 0 0 0 0 0 0 (252) TYR545 0 0 1 0 0 0 0 0 0 0 0 0 (280) ARG573 8 2 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 0 1 7 2 0 0 0 0 0 0 0 0 (367) ARG660 6 0 0 0 0 0 0 0 0 0 0 0 (461) GLN754 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrRaaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >6fbq_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN MEP DR1 RESPONSE ELEMENT, PH 7.0 organism=Homo sapiens DNA sequence DC(C1):DG(D17) DT(C2):DA(D16) DG(C3):DC(D15) DG(C4):DC(D14) DG(C5):DC(D13) DT(C6):DA(D12) DC(C7):DG(D11) DA(C8):DT(D10) DA(C9):DT(D9) DA(C10):DT(D8) DG(C11):DC(D7) DT(C12):DA(D6) DT(C13):DA(D5) DC(C14):DG(D4) DA(C15):DT(D3) DT(C16):DA(D2) DC(C17):DG(D1) chainA ( 14) SER143 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLU153 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS156 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) LYS160 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG161 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 prot.sequence ftkhicaicgdrsSgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeR >6fbq_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN MEP DR1 RESPONSE ELEMENT, PH 7.0 organism=Homo sapiens DNA sequence DC(C1):DG(D17) DT(C2):DA(D16) DG(C3):DC(D15) DG(C4):DC(D14) DG(C5):DC(D13) DT(C6):DA(D12) DC(C7):DG(D11) DA(C8):DT(D10) DA(C9):DT(D9) DA(C10):DT(D8) DG(C11):DC(D7) DT(C12):DA(D6) DT(C13):DA(D5) DC(C14):DG(D4) DA(C15):DT(D3) DT(C16):DA(D2) DC(C17):DG(D1) chainA ( 14) SER143 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLU153 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS156 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) LYS160 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG161 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 chainB ( 23) GLU153 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 ( 26) LYS156 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 ( 30) LYS160 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 31) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 prot.sequence ftkhicaicgdrsSgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeR/tkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeRqr >6fbr_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN MEP DR1 RESPONSE ELEMENT, PH 4.2 organism=Homo sapiens DNA sequence DC(C1):DG(D17) DT(C2):DA(D16) DG(C3):DC(D15) DG(C4):DC(D14) DG(C5):DC(D13) DT(C6):DA(D12) DC(C7):DG(D11) DA(C8):DT(D10) DA(C9):DT(D9) DA(C10):DT(D8) DG(C11):DC(D7) DT(C12):DA(D6) DT(C13):DA(D5) DC(C14):DG(D4) DA(C15):DT(D3) DT(C16):DA(D2) DC(C17):DG(D1) chainA ( 23) GLU153 0 0 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS156 0 0 4 8 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LYS160 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG161 0 0 0 0 0 0 8 11 0 0 0 0 0 0 0 0 0 chainB ( 4) MET129 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 ( 28) GLU153 0 0 0 0 0 0 0 0 0 0 1 6 5 0 0 0 0 ( 31) LYS156 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 ( 35) LYS160 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 36) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 prot.sequence tkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqee/gshMftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrclidkrqrnrcqycryqkclamgmkreavqeeRq >6fbr_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN MEP DR1 RESPONSE ELEMENT, PH 4.2 organism=Homo sapiens DNA sequence DC(C1):DG(D17) DT(C2):DA(D16) DG(C3):DC(D15) DG(C4):DC(D14) DG(C5):DC(D13) DT(C6):DA(D12) DC(C7):DG(D11) DA(C8):DT(D10) DA(C9):DT(D9) DA(C10):DT(D8) DG(C11):DC(D7) DT(C12):DA(D6) DT(C13):DA(D5) DC(C14):DG(D4) DA(C15):DT(D3) DT(C16):DA(D2) DC(C17):DG(D1) chainB ( 4) MET129 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 ( 28) GLU153 0 0 0 0 0 0 0 0 0 0 1 6 5 0 0 0 0 ( 31) LYS156 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 ( 35) LYS160 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 36) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 prot.sequence gshMftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrclidkrqrnrcqycryqkclamgmkreavqeeRq >6fbu_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI (E2Q) IN COMPLEX WITH AP-SITE CONTAINING DNA SUBSTRATE organism=Escherichia coli DNA sequence DG(B401):DC(C433) DG(B402):DC(C432) DC(B403):DG(C431) DT(B404):DA(C430) DT(B405):DA(C429) DC(B406):DG(C428) DT(B408):DA(C426) DC(B409):DG(C425) DC(B410):DG(C424) DT(B411):DA(C423) DG(B412):DC(C422) chainA ( 69) GLN69 0 0 0 0 0 18 0 0 0 0 0 ( 70) LEU70 0 0 0 0 0 11 6 0 0 0 0 ( 71) TYR71 0 0 0 0 0 0 10 0 0 0 0 (244) ARG252 0 0 0 0 0 7 0 0 0 0 0 prot.sequence pqgpeirraadnleaaikgkpltdvwfafpqlktyqsqligqhvthvetrgkallthfsndltlyshnQLYgvwrvvdtgeepqttrvlrvklqtadktillysasdiemlrpeqltthpflqrvgpdvldpnltpevvkerllsprfrnrqfagllldqaflaglgnylrveilwqvgltgnhkakdlnaaqldalahalleiprfsyatrgqalfrfkvfhrdgepcercgsiiekttlssRpfywcpgcqh >6fix_ABDE:lambda_repressor-like_DNA-binding_domains; title=ANTITOXIN GRAA IN COMPLEX WITH ITS OPERATOR organism=Pseudomonas putida DNA sequence DA(C1):DT(F34) DA(C2):DT(F33) DA(C3):DT(F32) DT(C4):DA(F31) DT(C5):DA(F30) DA(C6):DT(F29) DA(C7):DT(F28) DC(C8):DG(F27) DG(C9):DC(F26) DA(C10):DT(F25) DA(C11):DT(F24) DT(C12):DA(F23) DA(C13):DT(F22) DA(C14):DT(F21) DC(C15):DG(F20) DG(C16):DC(F19) DT(C17):DA(F18) DT(C18):DA(F17) DA(C19):DT(F16) DA(C20):DT(F15) DG(C21):DC(F14) DC(C22):DG(F13) DA(C23):DT(F12) DT(C24):DA(F11) DT(C25):DA(F10) DC(C26):DG(F9) DA(C27):DT(F8) DG(C28):DC(F7) DC(C29):DG(F6) DT(C30):DA(F5) chainA ( 25) ALA28 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ALA37 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR38 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ASN42 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 38) THR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 ( 40) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 ( 42) ASN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 chainD ( 25) ALA28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 34) ALA37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 ( 36) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 4 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ASN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 chainE ( 32) THR38 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) PRO39 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR40 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN42 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ngmrpihpgeilreefqkemgfsaAalaralgvATPTvNnilrerggvsadmalrlsicldttpefwlnlqtafdlrtaeqqhgdeiigsvqrlv/hlkngmrpihpgeilreefqkemgfsaaalaralgvaTPTvNnilrerggvsadmalrlsicldttpefwlnlqtafdlrtaeqqhgdeiigsvqrlva/ngmrpihpgeilreefqkemgfsaAalaralgvATPTvNnilrerggvsadmalrlsicldttpefwlnlqtafdlrtaeqqhgdeiigsvqrlv/rpihpgeilreefqkemgfsaaalaralgvaTPTvNnilrerggvsadmalrlsicldttpefwlnlqtafdlrtaeqqhgdeiigsvqrlv >6fix_D:lambda_repressor-like_DNA-binding_domains; title=ANTITOXIN GRAA IN COMPLEX WITH ITS OPERATOR organism=Pseudomonas putida DNA sequence DC(F7):DG(C28) DT(F8):DA(C27) DA(F10):DC(C26) DA(F11):DT(C25) DT(F12):DT(C24) DG(F13):DC(C22) DC(F14):DG(C21) DT(F15):DA(C20) DT(F16):DA(C19) DA(F17):DT(C18) DA(F18):DT(C17) DC(F19):DG(C16) DG(F20):DC(C15) DT(F21):DA(C14) DT(F22):DA(C13) DA(F23):DT(C12) DT(F24):DA(C11) DT(F25):DA(C10) DC(F26):DG(C9) DG(F27):DC(C8) DT(F28):DA(C7) DT(F29):DA(C6) DA(F30):DT(C5) chainD ( 25) ALA28 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ALA37 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR38 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) PRO39 0 0 0 0 0 0 0 0 4 9 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR40 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ASN42 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ngmrpihpgeilreefqkemgfsaAalaralgvATPTvNnilrerggvsadmalrlsicldttpefwlnlqtafdlrtaeqqhgdeiigsvqrlv >6fj5_ABCD: title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-AGG-HG) organism=Homo sapiens DNA sequence DA(F1):DT(G20) DG(F2):DC(G19) DG(F3):DC(G18) DC(F4):DG(G17) DA(F5):DT(G16) DT(F6):DA(G15) DG(F7):DC(G14) DC(F8):DG(G13) DC(F9):DG(G12) DT(F10):DA(G11) DA(F11):DT(G10) DG(F12):DC(G9) DG(F13):DC(G8) DC(F14):DG(G7) DA(F15):DT(G6) DT(F16):DA(G5) DG(F17):DC(G4) DC(F18):DG(G3) DC(F19):DG(G2) DT(F20):DA(G1) chainA ( 27) LYS120 0 0 0 0 0 0 0 8 10 2 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 11 12 6 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 1 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 12 6 0 0 chainC ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 1 7 6 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 5 13 11 0 0 0 0 0 chainD ( 27) LYS120 1 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 5 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkk/sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkk/sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkk/sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkk >6fj5_C:p53-like_transcription_factors; title=NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-AGG-HG) organism=Homo sapiens DNA sequence DA(G1):DT(F20) DG(G2):DC(F19) DG(G3):DC(F18) DC(G4):DG(F17) DA(G5):DT(F16) DT(G6):DA(F15) DG(G7):DC(F14) DC(G8):DG(F13) DC(G9):DG(F12) DT(G10):DA(F11) DA(G11):DT(F10) DG(G12):DC(F9) DG(G13):DC(F8) DC(G14):DG(F7) DA(G15):DT(F6) DT(G16):DA(F5) DG(G17):DC(F4) DC(G18):DG(F3) DC(G19):DG(F2) DT(G20):DA(F1) chainC ( 27) LYS120 0 0 0 0 0 0 0 6 7 1 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 11 13 5 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkk >6fk4_A:DNase_I-like; title=STRUCTURE OF 3' PHOSPHATASE NEXO (WT) FROM NEISSERIA BOUND TO DNA SUBSTRATE organism=Neisseria meningitidis serogroup B (strain MC58) / Neisseria meningitidis serogroup B (strain MC58) DNA sequence DC(B5):DG(B17) DT(B6):DA(B16) DA(B7):DT(B15) DG(B8):DC(B14) DC(B9):DG(B13) DG(B10):DA(B12) chainA ( 63) TYR62 0 0 1 0 0 0 (204) TYR203 5 0 0 0 0 0 (205) ARG204 18 0 0 0 0 0 prot.sequence amkittwnvnslnvrlpqvqnlladnppdilvlqelkldqdkfpaaalqmmgwhcvwsgqktYngvaivsrsvpqdvhfglpalpddpqrrviaatvsgvrvinvycvngealdspkfkykeqwfaaltefvrdemtrhgklvllgdfniapadadcydpekwhekihcssverqwfqnlldlgltdslrqvhpegafytwfdYRgamfqrklglridhilvspamaaalkdvrvdletralerpsdhapvtaefdw >6fk5_A:DNase_I-like; title=STRUCTURE OF 3' PHOSPHATASE NEXO (D146N) FROM NEISSERIA BOUND TO DNA SUBSTRATE IN PRESENCE OF MAGNESIUM ION organism=NEISSERIA MENINGITIDIS MC58 DNA sequence DC(B5):DG(B17) DT(B6):DA(B16) DA(B7):DT(B15) DG(B8):DC(B14) DC(B9):DG(B13) DG(B10):DA(B12) chainA ( 63) TYR62 0 0 1 0 0 0 (204) TYR203 6 0 0 0 0 0 (205) ARG204 17 0 0 0 0 0 prot.sequence amkittwnvnslnvrlpqvqnlladnppdilvlqelKldqdkfpaaalqmmgwhcvwsgqktYngvaivsrsvpqdvhfglpalpddpqrrviaatvsgvrvinvycvngealdspkfkykeqwfaaltefvrdemtrhgklvllgnfniapadadcydpekwhekihcssverqwfqnlldlgltdslrqvhpegafytwfdYRgamfqrklglridhilvspamaaalkdvrvdletralerpsDhapvtaefdw >6fke_A:DNase_I-like; title=STRUCTURE OF 3' PHOSPHATASE NEXO (D146N) FROM NEISSERIA BOUND TO PRODUCT DNA HAIRPIN organism=Neisseria meningitidis MC58 DNA sequence DT(B5):DA(B15) DA(B6):DT(B14) DG(B7):DC(B13) DC(B8):DG(B12) DG(B9):DA(B11) chainA ( 37) LYS36 0 0 1 0 0 ( 63) TYR62 0 0 5 1 0 (204) TYR203 4 0 0 0 0 (205) ARG204 24 0 0 0 0 prot.sequence amkittwnvnslnvrlpqvqnlladnppdilvlqelKldqdkfpaaalqmmgwhcvwsgqktYngvaivsrsvpqdvhfglpalpddpqrrviaatvsgvrvinvycvngealdspkfkykeqwfaaltefvrdemtrhgklvllgnfniapadadcydpekwhekihcssverqwfqnlldlgltdslrqvhpegafytwfDYRgamfqrklglridhilvspamaaalkdvrvdletralerpsdhapvtaefdw >6fl1_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE LACTOCOCCUS LACTIS FPG MUTANT T221P AND A FAPY-DG CONTAINING DNA organism=Lactococcus lactis subsp. cremoris DNA sequence DT(B2):DA(C28) DC(B3):DG(C27) DT(B4):DA(C26) DT(B5):DA(C25) DT(B6):DA(C24) FOX(B7):DC(C23) DT(B8):DA(C22) DT(B9):DA(C21) DT(B10):DA(C20) DC(B11):DG(C19) DT(B12):DA(C18) DC(B13):DG(C17) DG(B14):DC(C16) chainA ( 5) GLU5 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 74) ARG74 0 0 0 0 0 0 7 3 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 13 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 0 3 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 78 15 1 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 11 37 0 0 0 0 0 0 (172) ILE172 0 0 0 0 0 5 0 0 0 0 0 0 0 (173) TYR173 0 0 0 0 0 1 0 0 0 0 0 0 0 (217) SER217 0 0 0 0 0 1 0 0 0 0 0 0 0 (219) ILE219 0 0 0 0 0 9 0 0 0 0 0 0 0 (260) ARG260 0 0 0 0 0 0 5 1 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssirpysalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >6flp_CD: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE PAUSED ELONGATION COMPLEX WITHOUT RNA HAIRPIN BOUND TO NUSA organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(T9):DG(N39) DT(T10):DA(N38) DC(T11):DG(N37) DT(T12):DA(N36) DT(T13):DC(N35) DC(T14):DT(N34) DC(T15):DT(N33) DA(T16):DA(N32) DG(T17):DG(N31) DC(T18):DA(N30) DA(T19):DG(N29) DC(T20):DA(N28) DA(T21):DA(N27) DC(T22):DG(N26) DA(T23):DG(N25) DT(T24):DC(N24) DC(T25):DG(N15) DG(T26):DC(N14) DG(T27):DC(N13) DT(T28):DA(N12) DC(T29):DG(N11) DA(T30):DT(N10) DG(T31):DC(N9) DT(T32):DA(N8) DA(T33):DT(N7) DC(T34):DG(N6) DG(T35):DC(N5) DT(T36):DA(N4) DC(T37):DG(N3) DC(T38):DG(N2) DC(T39):DG(N1) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (105) LEU120 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ALA261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (252) ASP267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflksLpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfAtsdlnDlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraiTgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >6flp_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE PAUSED ELONGATION COMPLEX WITHOUT RNA HAIRPIN BOUND TO NUSA organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(N1):DC(T39) DG(N2):DC(T38) DG(N3):DC(T37) DA(N4):DT(T36) DC(N5):DG(T35) DG(N6):DC(T34) DT(N7):DA(T33) DA(N8):DT(T32) DC(N9):DG(T31) DT(N10):DA(T30) DG(N11):DC(T29) DA(N12):DT(T28) DC(N13):DG(T27) DC(N14):DG(T26) DG(N15):DC(T25) DC(N24):DT(T24) DG(N25):DA(T23) DG(N26):DC(T22) DA(N27):DA(T21) DA(N28):DC(T20) DG(N29):DA(T19) DA(N30):DC(T18) DG(N31):DG(T17) DA(N32):DA(T16) DT(N33):DC(T15) DT(N34):DC(T14) DC(N35):DT(T13) DA(N36):DT(T12) DG(N37):DC(T11) DA(N38):DT(T10) DG(N39):DC(T9) chainD (105) LEU120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ALA261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (252) ASP267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflksLpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfAtsdlnDlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraiTgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >6flq_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE PAUSED ELONGATION COMPLEX BOUND TO NUSA organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(N1):DG(T31) DG(N2):DA(T30) DG(N3):DC(T29) DA(N4):DT(T28) DC(N5):DG(T27) DG(N6):DG(T26) DT(N7):DC(T25) DA(N8):DT(T24) DC(N9):DA(T23) DT(N10):DC(T22) DG(N11):DA(T21) DA(N12):DC(T20) DC(N13):DA(T19) DC(N14):DC(T18) DG(N15):DG(T17) DC(N24):DA(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DG(N37):DC(T3) DA(N38):DT(T2) DG(N39):DC(T1) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6flq_CD: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE PAUSED ELONGATION COMPLEX BOUND TO NUSA organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(N1):DG(T31) DG(N2):DA(T30) DG(N3):DC(T29) DA(N4):DT(T28) DC(N5):DG(T27) DG(N6):DG(T26) DT(N7):DC(T25) DA(N8):DT(T24) DC(N9):DA(T23) DT(N10):DC(T22) DG(N11):DA(T21) DA(N12):DC(T20) DC(N13):DA(T19) DC(N14):DC(T18) DG(N15):DG(T17) DC(N24):DA(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DG(N37):DC(T3) DA(N38):DT(T2) DG(N39):DC(T1) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (240) LEU255 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ALA261 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfAtsdlndlyrrvinRnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >6fm4_B:Type_II_DNA_topoisomerase; title=THE CRYSTAL STRUCTURE OF S. AUREUS GYRASE COMPLEX WITH ID-130 AND DNA organism=? DNA sequence DG(F2):DC(E19) DC(F3):DG(E18) DC(F4):DG(E17) DG(F5):DC(E16) DT(F6):DA(E15) DA(F7):DT(E14) DG(F8):DC(E13) DG(F9):DC(E12) DG(F10):DC(E11) DC(F11):DG(E10) DC(F12):DG(E9) DC(F13):DG(E8) DT(F14):DA(E7) DA(F15):DT(E6) DC(F16):DG(E5) DG(F17):DC(E4) DG(F18):DC(E3) DC(F19):DG(E2) chainB ( 42) ARG458 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 (266) SER1085 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 (273) ARG1092 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (356) ILE1175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 21 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyanernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvRmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg >6fm4_BD:Type_II_DNA_topoisomerase; title=THE CRYSTAL STRUCTURE OF S. AUREUS GYRASE COMPLEX WITH ID-130 AND DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DG(F2):DC(E19) DC(F3):DG(E18) DC(F4):DG(E17) DG(F5):DC(E16) DT(F6):DA(E15) DA(F7):DT(E14) DG(F8):DC(E13) DG(F9):DC(E12) DG(F10):DC(E11) DC(F11):DG(E10) DC(F12):DG(E9) DC(F13):DG(E8) DT(F14):DA(E7) DA(F15):DT(E6) DC(F16):DG(E5) DG(F17):DC(E4) DG(F18):DC(E3) DC(F19):DG(E2) chainB ( 42) ARG458 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 (266) SER1085 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 (273) ARG1092 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (356) ILE1175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 21 0 0 chainD ( 44) LYS460 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 (265) SER1085 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (302) ARG1122 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (355) ILE1175 0 0 23 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyanernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvRmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >6fn0_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=THE ANIMAL-LIKE CRYPTOCHROME FROM CHLAMYDOMONAS REINHARDTII IN COMPLEX WITH 6-4 DNA organism=CHLAMYDOMONAS REINHARDTII DNA sequence DC(C1):DG(D14) DA(C2):DT(D13) DG(C3):DC(D12) DC(C4):DG(D11) DG(C5):DC(D10) DG(C6):DC(D9) 64T(C7):DA(D8) 5PY(C8):DA(D7) DG(C9):DC(D6) DC(C10):DG(D5) DC(C11):DG(D4) DG(C12):DC(D3) DT(C13):DA(D2) DG(C14):DC(D1) chainA (234) LYS237 0 0 0 0 0 0 12 2 0 0 0 0 0 0 (235) PRO238 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (283) VAL286 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (288) GLN291 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (291) TRP294 0 0 0 0 0 0 21 0 0 0 0 0 0 0 (354) HIS357 0 0 0 0 0 0 4 7 0 0 0 0 0 0 (355) LEU358 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (358) HIS361 0 0 0 0 0 0 2 7 0 0 0 0 0 0 (398) TRP401 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (406) SER409 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (407) GLN410 0 0 0 0 0 22 0 0 0 0 0 0 0 0 (409) PHE412 0 0 0 0 0 0 0 7 24 0 0 0 0 0 (410) ARG413 0 0 0 0 0 0 0 0 17 0 0 0 0 0 (412) TYR415 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence vknsiiwfrkglrlhdnpalleackdakhvypvfvldphflqqssykvsvnrynfllesledlqrsfqargsrllvlrgkpeevfprvfrewgvtqlcfehdtepyakvrdaavrrlaaeagvevvtpishtlydtdmlvarnggaapltmqsftklvdrvgdppapapdppaampppaedmpsaapaatgvptwqevgfkeppltvfkggetealarleaafqdpkwvagfqkpdtdpsawekpattvlspylkfgclsarlfharllevyrrhpahsqppvslrgqllwreffytvgsttpnfhrmagnpvckqidwddnpeflaawreartgfpwidaimtqlvtwgwmhhlarhsvacfltrgdlyvswergmevfeehlidqdhylnaanwmwlsasaffSQyFRvyspvvfgkkydpegrfirkflpvlkdmpakyiyepwtaplevqrkagcvvgrdypapivdhavaskaciarmaaayrrskgekla >6fq5_ABCDEFGH:Histone-fold; title=CLASS 1 : CANONICAL NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-12):DT(J13) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/hrkVlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvfleNvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ktRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/Rktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/hrKvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/rktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6fq5_D:Histone-fold; title=CLASS 1 : CANONICAL NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DC(J-73):DG(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J13):DA(I-12) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainD ( 1) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Rktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6fq6_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CLASS 2 : DISTORTED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DC(J-73):DG(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DC(J-4):DT(I5) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 15 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirg/rkvLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/tRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/eSyaiyvykvlkqvhpdtgisskamsimnsfvNdvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirg/kvlRdNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/tRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/sYaiyvykvlkqvhpdtgisskamsimnsfvnDvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6fq8_A:Histone-fold; title=CLASS 3 : TRANSLOCATED NUCLEOSOME organism=? DNA sequence DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirg >6fq8_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CLASS 3 : TRANSLOCATED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 chainB chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG42 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 6) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirg/rhRkVlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/kaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/syaiyvykvlkqvhpdtgisskamsimnsFvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/ryRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirg/kvLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktRssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/syaiyVykvlkqvhpdtgisskamsimnsfVndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6fqm_ABCD:Type_II_DNA_topoisomerase; title=3.06A COMPLEX OF S.AUREUS GYRASE WITH IMIDAZOPYRAZINONE T1 AND DNA organism=STAPHYLOCOCCUS AUREUS SUBSP. AUREUS N315 DNA sequence DA(E-7):DT(F11) DG(E-6):DC(F10) DA(E-5):DT(F9) DG(E-4):DC(F8) DT(E-3):DA(F7) DA(E-2):DT(F6) DT(E-1):DA(F5) DG(E1):DC(F4) DG(E2):DC(F3) DC(E3):DG(F2) DC(E4):DG(F1) DA(E5):DT(F-1) DT(E6):DA(F-2) DA(E7):DT(F-3) DC(E8):DG(F-4) DT(E9):DA(F-5) DC(E10):DG(F-6) DT(E11):DA(F-7) chainB ( 31) LYS460 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 chainA ( 76) SER84 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 77) SER85 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (114) ARG122 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (166) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 15 0 0 chainD ( 25) LYS460 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 chainC ( 75) SER84 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 76) SER85 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 79) GLU88 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ARG122 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (165) ILE175 0 0 19 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence inernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/dcskspeeceiflvegdsgrrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpttmnpeallqvkledaieadqtfemlmgdvvenrrqfiednav/nernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/speceiflvegddsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpllwettrallqvkledaieadqtfemlmgdvvenrrqfiedna >6fqm_D:Type_II_DNA_topoisomerase; title=3.06A COMPLEX OF S.AUREUS GYRASE WITH IMIDAZOPYRAZINONE T1 AND DNA organism=STAPHYLOCOCCUS AUREUS SUBSP. AUREUS N315 DNA sequence DA(F-7):DT(E11) DG(F-6):DC(E10) DA(F-5):DT(E9) DG(F-4):DC(E8) DT(F-3):DA(E7) DA(F-2):DT(E6) DT(F-1):DA(E5) DG(F1):DC(E4) DG(F2):DC(E3) DC(F3):DG(E2) DC(F4):DG(E1) DA(F5):DT(E-1) DT(F6):DA(E-2) DA(F7):DT(E-3) DC(F8):DG(E-4) DT(F9):DA(E-5) DC(F10):DG(E-6) DT(F11):DA(E-7) chainD ( 25) LYS460 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 prot.sequence speceiflvegddsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpllwettrallqvkledaieadqtfemlmgdvvenrrqfiedna >6fqp_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF TALE HOMEOBOX DOMAIN TRANSCRIPTION FACTOR TGIF1 WITH ITS CONSENSUS DNA organism=Homo sapiens DNA sequence DA(M1):DT(L16) DT(M2):DA(L15) DT(M3):DA(L14) DG(M4):DC(L13) DA(M5):DT(L12) DC(M6):DG(L11) DA(M7):DT(L10) DG(M8):DC(L9) DC(M9):DG(L8) DT(M10):DA(L7) DG(M11):DC(L6) DT(M12):DA(L5) DC(M13):DG(L4) DA(M14):DT(L3) DA(M15):DT(L2) DT(M16):DA(L1) chainA ( 1) ARG168 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 ( 46) ASN213 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 49) ILE216 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 ( 50) ASN217 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 ( 53) ARG220 0 0 0 0 0 0 0 0 0 9 14 7 0 0 0 0 ( 54) ARG221 0 0 0 0 0 0 0 0 0 0 0 5 11 13 0 0 chainB ( 2) ARG165 0 0 0 6 9 9 0 0 0 0 0 0 0 0 0 0 ( 4) ARG167 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN213 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 53) ILE216 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 ( 54) ASN217 0 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 ( 57) ARG220 0 0 0 0 4 14 9 0 0 0 0 0 0 0 0 0 ( 58) ARG221 0 0 15 11 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RgnlpkesvqilrdwlyehrynaypseqekallsqqthlstlqvcNwfINarRRllpdmlrkdgkdp/kRrRrgnlpkesvqilrdwlyehrynaypseqekallsqqthlstlqvcNwfINarRRllpdmlrk >6fqp_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF TALE HOMEOBOX DOMAIN TRANSCRIPTION FACTOR TGIF1 WITH ITS CONSENSUS DNA organism=Homo sapiens DNA sequence DA(L1):DT(M16) DT(L2):DA(M15) DT(L3):DA(M14) DG(L4):DC(M13) DA(L5):DT(M12) DC(L6):DG(M11) DA(L7):DT(M10) DG(L8):DC(M9) DC(L9):DG(M8) DT(L10):DA(M7) DG(L11):DC(M6) DT(L12):DA(M5) DC(L13):DG(M4) DA(L14):DT(M3) DA(L15):DT(M2) DT(L16):DA(M1) chainB ( 2) ARG165 0 0 0 0 0 0 0 0 0 0 9 9 6 0 0 0 ( 4) ARG167 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 ( 50) ASN213 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 53) ILE216 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 ( 54) ASN217 0 0 0 0 0 0 0 0 0 0 1 10 3 0 0 0 ( 57) ARG220 0 0 0 0 0 0 0 0 0 9 14 4 0 0 0 0 ( 58) ARG221 0 0 0 0 0 0 0 0 0 0 0 4 11 15 0 0 prot.sequence kRrRrgnlpkesvqilrdwlyehrynaypseqekallsqqthlstlqvcNwfINarRRllpdmlrk >6fqq_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF TALE HOMEOBOX DOMAIN TRANSCRIPTION FACTOR TGIF1 DOUBLE ALANINE MUTANT BOUND TO ITS CONSENSUS DNA organism=Homo sapiens DNA sequence DA(M1):DT(L16) DT(M2):DA(L15) DT(M3):DA(L14) DG(M4):DC(L13) DA(M5):DT(L12) DC(M6):DG(L11) DA(M7):DT(L10) DG(M8):DC(L9) DC(M9):DG(L8) DT(M10):DA(L7) DG(M11):DC(L6) DT(M12):DA(L5) DC(M13):DG(L4) DA(M14):DT(L3) DA(M15):DT(L2) DT(M16):DA(L1) chainA ( 44) ASN213 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 ( 47) ILE216 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 48) ASN217 0 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 ( 51) ARG220 0 0 0 0 0 0 0 0 0 9 10 7 0 0 0 0 ( 52) ARG221 0 0 0 0 0 0 0 0 0 0 0 7 14 18 0 0 chainB ( 45) ASN213 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 ( 48) ILE216 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 ( 49) ASN217 0 0 0 5 10 2 0 0 0 0 0 0 0 0 0 0 ( 52) ARG220 0 0 0 0 6 10 9 0 0 0 0 0 0 0 0 0 ( 53) ARG221 0 0 8 13 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nlpkesvqilrdwlyehrynaypseqekallsqqthlstlqvcNwfINarRRllpdmlrk/gnlpkesvqilrdwlyehrynaypseqekallsqqthlstlqvcNwfINarRRllpdmlrk >6fqq_DE:Homeodomain-like; title=CRYSTAL STRUCTURE OF TALE HOMEOBOX DOMAIN TRANSCRIPTION FACTOR TGIF1 DOUBLE ALANINE MUTANT BOUND TO ITS CONSENSUS DNA organism=Homo sapiens DNA sequence DA(H1):DT(G16) DT(H2):DA(G15) DT(H3):DA(G14) DG(H4):DC(G13) DA(H5):DT(G12) DC(H6):DG(G11) DA(H7):DT(G10) DG(H8):DC(G9) DC(H9):DG(G8) DT(H10):DA(G7) DG(H11):DC(G6) DT(H12):DA(G5) DC(H13):DG(G4) DA(H14):DT(G3) DA(H15):DT(G2) DT(H16):DA(G1) chainD ( 47) ASN213 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 ( 50) ILE216 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 ( 51) ASN217 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 ( 54) ARG220 0 0 0 0 0 0 0 0 0 8 6 4 0 0 0 0 ( 55) ARG221 0 0 0 0 0 0 0 0 0 0 0 6 10 14 0 0 chainE ( 45) ASN213 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 ( 48) ILE216 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 ( 49) ASN217 0 0 0 4 10 1 0 0 0 0 0 0 0 0 0 0 ( 52) ARG220 0 0 0 0 10 16 17 0 0 0 0 0 0 0 0 0 ( 53) ARG221 0 0 14 11 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aagnlpkesvqilrdwlyehrynaypseqekallsqqthlstlqvcNwfINarRRllpdmlrk/gnlpkesvqilrdwlyehrynaypseqekallsqqthlstlqvcNwfINarRRllpdmlrk >6fqq_E:Homeodomain-like; title=CRYSTAL STRUCTURE OF TALE HOMEOBOX DOMAIN TRANSCRIPTION FACTOR TGIF1 DOUBLE ALANINE MUTANT BOUND TO ITS CONSENSUS DNA organism=Homo sapiens DNA sequence DA(G1):DT(H16) DT(G2):DA(H15) DT(G3):DA(H14) DG(G4):DC(H13) DA(G5):DT(H12) DC(G6):DG(H11) DA(G7):DT(H10) DG(G8):DC(H9) DC(G9):DG(H8) DT(G10):DA(H7) DG(G11):DC(H6) DT(G12):DA(H5) DC(G13):DG(H4) DA(G14):DT(H3) DA(G15):DT(H2) DT(G16):DA(H1) chainE ( 45) ASN213 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 ( 48) ILE216 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 49) ASN217 0 0 0 0 0 0 0 0 0 0 1 10 4 0 0 0 ( 52) ARG220 0 0 0 0 0 0 0 0 0 17 16 10 0 0 0 0 ( 53) ARG221 0 0 0 0 0 0 0 0 0 0 0 5 11 14 0 0 prot.sequence gnlpkesvqilrdwlyehrynaypseqekallsqqthlstlqvcNwfINarRRllpdmlrk >6fqs_A:Type_II_DNA_topoisomerase; title=3.11A COMPLEX OF S.AUREUS GYRASE WITH IMIDAZOPYRAZINONE T3 AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(F-8):DT(E12) DA(F-7):DT(E11) DG(F-6):DC(E10) DA(F-5):DT(E9) DG(F-4):DC(E8) DT(F-3):DA(E7) DA(F-2):DT(E6) DT(F-1):DA(E5) DG(F1):DC(E4) DG(F2):DC(E3) DC(F3):DG(E2) DC(F4):DG(E1) DA(F5):DT(E-1) DT(F6):DA(E-2) DA(F7):DT(E-3) DC(F8):DG(E-4) DT(F9):DA(E-5) DC(F10):DG(E-6) DT(F11):DA(E-7) DT(F12):DG(E-8) chainA ( 24) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 75) SER84 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 76) SER85 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 79) GLU88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 83) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (166) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 22 0 0 0 prot.sequence nernitsemresfldyamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyEamvRmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >6fqs_ABCD:Type_II_DNA_topoisomerase; title=3.11A COMPLEX OF S.AUREUS GYRASE WITH IMIDAZOPYRAZINONE T3 AND DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DG(E-8):DT(F12) DA(E-7):DT(F11) DG(E-6):DC(F10) DA(E-5):DT(F9) DG(E-4):DC(F8) DT(E-3):DA(F7) DA(E-2):DT(F6) DT(E-1):DA(F5) DG(E1):DC(F4) DG(E2):DC(F3) DC(E3):DG(F2) DC(E4):DG(F1) DA(E5):DT(F-1) DT(E6):DA(F-2) DA(E7):DT(F-3) DC(E8):DG(F-4) DT(E9):DA(F-5) DC(E10):DG(F-6) DT(E11):DA(F-7) DT(E12):DG(F-8) chainB ( 44) LYS460 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 24) ARG33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) SER84 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) SER85 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) GLU88 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG92 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE175 0 0 0 22 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 chainC ( 24) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 75) SER84 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 76) SER85 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (113) ARG122 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (165) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 20 0 0 0 (222) ARG232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 prot.sequence nernitsemresfldyamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyEamvRmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavya/nernitsemresfldyamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRtearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirRayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtSfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >6fqv_ABCD:Type_II_DNA_topoisomerase; title=2.60A BINARY COMPLEX OF S.AUREUS GYRASE WITH UNCLEAVED DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DA(F2):DT(E19) DG(F3):DC(E18) DC(F4):DG(E17) DG(F5):DC(E16) DT(F6):DA(E15) DA(F7):DT(E14) DC(F8):DG(E13) DG(F9):DC(E12) DG(F10):DC(E11) DC(F11):DG(E10) DC(F12):DG(E9) DG(F13):DC(E8) DT(F14):DA(E7) DA(F15):DT(E6) DC(F16):DG(E5) DG(F17):DC(E4) DC(F18):DG(E3) DT(F19):DA(E2) chainA ( 24) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 76) SER85 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (166) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 26 0 0 chainB ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chainC ( 24) ARG33 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE175 0 0 21 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 44) LYS460 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav/nernitsemresfldyamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdssiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >6fqv_RSTU:Type_II_DNA_topoisomerase; title=2.60A BINARY COMPLEX OF S.AUREUS GYRASE WITH UNCLEAVED DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DA(V2):DT(W19) DG(V3):DC(W18) DC(V4):DG(W17) DG(V5):DC(W16) DT(V6):DA(W15) DA(V7):DT(W14) DC(V8):DG(W13) DG(V9):DC(W12) DG(V10):DC(W11) DC(V11):DG(W10) DC(V12):DG(W9) DG(V13):DC(W8) DT(V14):DA(W7) DA(V15):DT(W6) DC(V16):DG(W5) DG(V17):DC(W4) DC(V18):DG(W3) DT(V19):DA(W2) chainR ( 24) ARG33 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE175 0 0 21 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainS ( 44) LYS460 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 chainT ( 24) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (166) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 25 0 0 chainU ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 prot.sequence nernitsemresfldyamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdssiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy/nernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdssiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyanl >6fqv_T:Type_II_DNA_topoisomerase; title=2.60A BINARY COMPLEX OF S.AUREUS GYRASE WITH UNCLEAVED DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DA(V2):DT(W19) DG(V3):DC(W18) DC(V4):DG(W17) DG(V5):DC(W16) DT(V6):DA(W15) DA(V7):DT(W14) DC(V8):DG(W13) DG(V9):DC(W12) DG(V10):DC(W11) DC(V11):DG(W10) DC(V12):DG(W9) DG(V13):DC(W8) DT(V14):DA(W7) DA(V15):DT(W6) DC(V16):DG(W5) DG(V17):DC(W4) DC(V18):DG(W3) DT(V19):DA(W2) chainT ( 24) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (166) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 25 0 0 prot.sequence nernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdssiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg >6fwk_B:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE CRYSTAL STRUCTURE OF POL2CORE-M644G IN COMPLEX WITH DNA AND AN INCOMING NUCLEOTIDE organism=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) DNA sequence DT(C1):DA(D16) DA(C2):DT(D15) DA(C3):DT(D14) DC(C4):DG(D13) DC(C5):DG(D12) DG(C6):DC(D11) DC(C7):DG(D10) DG(C8):DC(D9) DT(C9):DA(D8) DT(C10):DA(D7) chainB (881) LYS967 0 0 0 0 0 0 0 0 8 6 (902) ARG988 0 0 0 0 0 0 7 4 0 0 prot.sequence yalsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqenqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnannnvqrniynvvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafdiettkpplkfpdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwvkrdsylpqgsqglkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgtgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasgypnimttnrlqpdsiktcarklkwawrgeffpskmdeynmikralqnetfpnltfdelsyadqvihikkrlteysrkvseivereaivcqrenpfyvdtvksfrdrryefkglaktwkgnlskidpsdkhardeakkmivlydslqlahkvilnsfygyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKryavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenrsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrkia >6fwr_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF DING IN COMPLEX WITH SSDNA organism=Escherichia coli DNA sequence DT(B10) DT(B9) DT(B8) DT(B7) DT(B6) DT(B5) DT(B1) DT(B2) DT(B3) DT(B4):DT(B5) chainA (224) ALA225 0 1 0 0 0 0 0 0 0 0 (258) ASP259 3 0 0 0 0 0 0 0 0 0 (587) GLN592 0 0 0 0 1 0 0 0 0 0 (612) PRO617 0 0 0 0 0 12 0 0 0 12 (613) ILE618 0 0 0 0 0 0 0 0 6 10 (614) ASP619 0 0 0 0 0 1 0 0 0 17 (615) SER620 0 0 0 0 0 1 0 0 0 1 (631) TYR636 0 0 0 0 0 0 43 12 0 0 (633) PHE638 0 0 0 0 0 0 0 4 2 0 (637) SER642 0 0 0 0 0 0 0 0 1 0 prot.sequence altaalkaqiaawykalqeqipdfiprapqrqmiadvaktlageegrhlaieaptgvgktlsylipgiaiareeqktlvvstanvalqdqiyskdlpllkkiipdlkftaafgrgryvcprnltalasteptqqdllaflddeltpnnqeeqkrcaklkgdldtykwdglrdhtdiaidddlwrrlstdkasclnrncyyyrecpffvarreiqeaevvvanhAlvmaameseavlpdpknlllvldeghhlpdvarDalemsaeitapwyrlqldlftklvatcmeqfrpktipplaiperlnahceelyeliaslnnilnlympagqeaehrfamgelpdevleicqrlakltemlrglaelflndlsekdivrlhrlilqmnralgmfeaqsklwrlaslaqssgapvtkwatreeregqlhlwfhcvgirvsdqlerllwrsiphiivtsatlrslnsfsrlqemsglkekagdrfvaldspfnhceqgkiviprmrvepsidneeqhiaemaaffreqveskkhlgmlvlfasgramqrfldyvtdlrlmllvqgdqpryrlvelhrkrvangersvlvglQsfaegldlkgdllsqvhihkiafpPIDSpvvitegewlkslnrYpFevqSlpsasfnliqqvgrlirshgcwgevviydkrlltknygkrlldalpvfpieqpevpegivkk >6fws_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF DING IN COMPLEX WITH SSDNA AND ADPBEF organism=Escherichia coli DNA sequence DT(C0) DT(C1) DT(C2) DT(C3) DT(C4) DT(C5) DT(C6) DT(C7) DT(C8) DT(C9) DT(C10) chainA (211) ALA225 0 0 0 0 0 0 0 0 1 0 0 (245) ASP259 0 0 0 0 0 0 0 1 0 0 0 (528) ARG545 0 0 0 0 0 1 0 0 0 0 0 (600) PRO617 0 0 0 0 1 8 0 0 0 0 0 (601) ILE618 0 0 0 2 6 0 0 0 0 0 0 (602) ASP619 0 0 0 0 3 16 0 0 0 0 0 (619) TYR636 0 39 19 0 0 0 0 0 0 0 0 (621) PHE638 0 0 5 2 0 0 0 0 0 0 0 (622) GLU639 0 11 0 0 0 0 0 0 0 0 0 (625) SER642 0 0 0 3 0 0 0 0 0 0 0 prot.sequence maltaalkaqiaawykalqeqipdfiprapqrqmiadvaktlageegrhlaieaptgvgktlsylipgiaiareeqktlvvstanvalqdqiyskdlpllkkiipdlkftaafgrgryvcprnltalasteptqqdllaflddeltpnnqeeqkrcaklkgdldtykwdglrdhtdiaidddlwrrlstecpffvarreiqeaevvvanhAlvmaameseavlpdpknlllvldeghhlpdvarDalemsaeitapwyrlqldlftklvatcmeqfrpktipplaiperlnahceelyeliaslnnilnlympagqeaehrfamgelpdevleicqrlakltemlrglaelflndlsektdivrlhrlilqmnralgmfeaqsklwrlaslaqssgapvtkwatreeregqlhlwfhcvgirvsdqlerllwrsiphiivtsatlrslnsfsrlqemsglkekagdrfvaldspfnhceqgkiviprmrvepsidneeqhiaemaaffreqveskkhlgmlvlfasgRamqrfldyvtdlrlmllvqgdqpryrlvelhrkrvangersvlvglqsfaegldlkgdllsqvhihkiafpPIDspvvitegewlkslnrYpFEvqSlpsasfnliqqvgrlirshgcwgevviydkrlltknygkrlldalpvfpieqpevpegivk >6fzs_A:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD5-MH1 BOUND TO THE GGCGC SITE. organism=Homo sapiens DNA sequence DT(C1):DA(D16) DG(C2):DC(D15) DC(C3):DG(D14) DA(C4):DT(D13) DG(C5):DC(D12) DG(C6):DC(D11) DC(C7):DG(D10) DG(C8):DC(D9) DC(C9):DG(D8) DG(C10):DC(D7) DC(C11):DG(D6) DC(C12):DG(D5) DT(C13):DA(D4) DG(C14):DC(D3) DC(C15):DG(D2) DA(C16):DT(D1) chainA ( 64) ASP73 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 66) ARG75 0 0 0 0 0 0 0 0 0 0 1 10 12 0 0 0 ( 68) GLN77 0 0 0 0 0 0 0 4 8 1 0 0 0 0 0 0 ( 73) LYS82 0 0 0 0 0 0 0 0 2 6 6 0 0 0 0 0 prot.sequence ftspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrvesp >6fzs_AB:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD5-MH1 BOUND TO THE GGCGC SITE. organism=Homo sapiens DNA sequence DT(D1):DA(C16) DG(D2):DC(C15) DC(D3):DG(C14) DA(D4):DT(C13) DG(D5):DC(C12) DG(D6):DC(C11) DC(D7):DG(C10) DG(D8):DC(C9) DC(D9):DG(C8) DG(D10):DC(C7) DC(D11):DG(C6) DC(D12):DG(C5) DT(D13):DA(C4) DG(D14):DC(C3) DC(D15):DG(C2) DA(D16):DT(C1) chainA ( 64) ASP73 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 66) ARG75 0 0 0 12 10 1 0 0 0 0 0 0 0 0 0 0 ( 68) GLN77 0 0 0 0 0 0 1 8 4 0 0 0 0 0 0 0 ( 73) LYS82 0 0 0 0 0 6 6 2 0 0 0 0 0 0 0 0 chainB ( 64) ASP73 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 66) ARG75 0 0 0 0 0 0 0 0 0 0 1 10 13 0 0 0 ( 68) GLN77 0 0 0 0 0 0 0 2 8 2 0 0 0 0 0 0 ( 73) LYS82 0 0 0 0 0 0 0 0 1 6 6 0 0 0 0 0 prot.sequence ftspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrvesp/ftspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrvespvl >6fzt_AB:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD8_9-MH1 BOUND TO THE GGCGC SITE. organism=Homo sapiens DNA sequence DT(D1):DA(C16) DG(D2):DC(C15) DC(D3):DG(C14) DA(D4):DT(C13) DG(D5):DC(C12) DG(D6):DC(C11) DC(D7):DG(C10) DG(D8):DC(C9) DC(D9):DG(C8) DG(D10):DC(C7) DC(D11):DG(C6) DC(D12):DG(C5) DT(D13):DA(C4) DG(D14):DC(C3) DC(D15):DG(C2) DA(D16):DT(C1) chainA ( 69) ASP73 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 71) ARG75 0 0 0 4 11 2 0 0 0 0 0 0 0 0 0 0 ( 73) GLN77 0 0 0 0 0 0 1 8 3 0 0 0 0 0 0 0 ( 78) LYS82 0 0 0 0 0 5 7 2 0 0 0 0 0 0 0 0 chainB ( 66) ARG75 0 0 0 0 0 0 0 0 0 0 1 10 4 0 0 0 ( 68) GLN77 0 0 0 0 0 0 0 3 8 1 0 0 0 0 0 0 ( 73) LYS82 0 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 prot.sequence sslfsftspavkrllgwkqgdeeekwaekavdslvkklkkkkgamdeleralscpgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpleccefpfgskqkevcinpyhyrrvetpv/ftspavkrllgwkqgdeeekwaekavdslvkklkkkkgamdeleralscpgqpskcvtiprsldgRlQvshrKglphviycrvwrwpdlqshhelkpleccefpfgskqkevcinpyhyrrvetpv >6fzt_B:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD8_9-MH1 BOUND TO THE GGCGC SITE. organism=Homo sapiens DNA sequence DT(D1):DA(C16) DG(D2):DC(C15) DC(D3):DG(C14) DA(D4):DT(C13) DG(D5):DC(C12) DG(D6):DC(C11) DC(D7):DG(C10) DG(D8):DC(C9) DC(D9):DG(C8) DG(D10):DC(C7) DC(D11):DG(C6) DC(D12):DG(C5) DT(D13):DA(C4) DG(D14):DC(C3) DC(D15):DG(C2) DA(D16):DT(C1) chainB ( 66) ARG75 0 0 0 0 0 0 0 0 0 0 1 10 4 0 0 0 ( 68) GLN77 0 0 0 0 0 0 0 3 8 1 0 0 0 0 0 0 ( 73) LYS82 0 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 prot.sequence ftspavkrllgwkqgdeeekwaekavdslvkklkkkkgamdeleralscpgqpskcvtiprsldgRlQvshrKglphviycrvwrwpdlqshhelkpleccefpfgskqkevcinpyhyrrvetpv >6g0a_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE CRYSTAL STRUCTURE OF THE POL2 CATALYTIC DOMAIN OF DNA POLYMERASE EPSILON CARRYING A P301R SUBSTITUTION. organism=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) DNA sequence DT(P1):DA(T16) DA(P2):DT(T15) DA(P3):DT(T14) DC(P4):DG(T13) DC(P5):DG(T12) DG(P6):DC(T11) DC(P7):DG(T10) DG(P8):DC(T9) DT(P9):DA(T8) DT(P10):DA(T7) chainA (885) LYS967 0 0 0 0 0 0 0 0 5 6 (906) ARG988 0 0 0 0 0 0 8 9 0 0 prot.sequence nnyalsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqetnqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnarniynvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafdiettkpplkfrdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwvkrdsylpqgsqglkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgtgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasmypnimttnrlqpdsikaertcarklkwawrgeffpskmdeynmikralqnetfpnkkkvltfdelsyadqvihikkrlteysrkvyhrvkvseivereaivcqrenpfyvdtvksfrdrryefkglaktwkgnlskhardeakkmivlydslqlahkvilnsfygyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKryavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenrsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrkiat >6g0l_M:P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like; title=STRUCTURE OF TWO MOLECULES OF THE CHROMATIN REMODELLING ENZYME CHD1 BOUND TO A NUCLEOSOME organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DA(I-86):DT(J87) DT(I-85):DA(J86) DA(I-84):DT(J85) DC(I-83):DG(J84) DG(I-82):DC(J83) DC(I-81):DG(J82) DG(I-80):DC(J81) DG(I-79):DC(J80) DC(I-78):DG(J79) DC(I-77):DG(J78) DG(I-76):DC(J77) DC(I-75):DG(J76) DC(I-74):DG(J75) DC(I-73):DG(J74) DA(I-72):DT(J73) DT(I-71):DA(J72) DC(I-70):DG(J71) DA(I-69):DT(J70) DG(I-68):DC(J69) DA(I-67):DT(J68) DA(I-66):DT(J67) DT(I-65):DA(J66) DC(I-64):DG(J65) DC(I-63):DG(J64) DC(I-62):DG(J63) DG(I-61):DC(J62) DG(I-60):DC(J61) DT(I-59):DA(J60) DG(I-58):DC(J59) DC(I-57):DG(J58) DC(I-56):DG(J57) DG(I-55):DC(J56) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) DT(I73):DA(J-73) DA(I74):DT(J-74) DA(I75):DT(J-75) DC(I76):DG(J-76) DG(I77):DC(J-77) DA(I78):DT(J-78) DT(I79):DA(J-79) DG(I80):DC(J-80) DC(I81):DG(J-81) DT(I82):DA(J-82) DG(I83):DC(J-83) DG(I84):DC(J-84) DG(I85):DC(J-85) DC(I86):DG(J-86) DA(I87):DT(J-87) DT(I88):DA(J-88) DA(I89):DT(J-89) chainM (306) GLU493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) ARG517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (736) LYS1115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 2 0 0 0 0 0 0 0 0 0 0 (844) ARG1255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 prot.sequence dfhgidivinhrlktsktvpdlnnckenyeflikwtdeshlhntwetyesigqvrglkrldnyckqfiiedqqvrldpyvtaedieimdmererrldefeefhvperiidsqrasledgtsqlqylvkwrrlnydeatwenatdivklapeqvkhfqnrenskilpqyssnytsqrprfeklsvqppfikggelrdfqltginwmaflwskgdngilademglgktvqtvafiswlifarrqngphiivvplstmpawldtfekwapdlncicymgnqksrdtireyefytnpktmkfnvllttyEyilkdraelgsikwqfmavdeahRlknaesslyeslnsfkvanrmlitgtplqnnikelaalvnflmpgrfnqdeeqeeyihdlhrriqpfilrrlkkdvekslpskterilrvelsdvqteyykniltknysimnelkkasnhpylfdnaeervlqkfmtrenvlrglimssgkmvlldqlltrlkkdghrvlifsqmvrmldilgdylsikginfqrldgtvpsaqrrisidhfnspdsndfvfllstragglginlmtadtvvifdsdwnpqadlqamarahrigqknhvmvyrlvskdtveeevlerarkkmileydmdsigesevralykailkfgnlkeildeliadgtlpvksfekygetydemmeaakdcvheeeknrkeileklekhatayraklksgeikaenqpkdnpltrlslkkreKkavlfnfkgvkslnaesllsrvedlkylknlinsnykddplkfslgnntpkpvqnwssnwtkeedeklligvfkygygswtqirddpflgitdkiflkkvpgaihlgRrvdyllsflrg >6g1l_A:HLH,_helix-loop-helix_DNA-binding_domain; title=MITF/CLEARBOX STRUCTURE organism=Mus musculus DNA sequence DA(B1) DG(B2) DT(B3) DA(B4) DT(B5) DC(B6) DA(B7) DC(B8) DG(B9) DT(B10) DG(B11) DA(B12) DT(B13) DA(B14) DC(B15) DT(B16) chainA ( 10) HIS209 0 0 0 0 0 0 0 0 0 7 11 5 0 0 0 0 ( 11) ASN210 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 14) GLU213 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 ( 18) ARG217 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 prot.sequence akerqkkdnHNliErrrRfnindrikelgtlipksndpdmrwnkgtilkasvdyirklqreqqrakdlenrqkklehan >6g1t_A: title=TRAN, A REPRESSOR OF AN ENTEROCOCCUS CONJUGATIVE TYPE IV SECRETION SYSTEM organism=ENTEROCOCCUS FAECALIS DNA sequence DA(E6):DT(D29) DA(E7):DT(D28) DG(E8):DC(D27) DT(E9):DA(D26) DA(E10):DT(D25) DA(E11):DT(D24) DA(E12):DT(D23) DT(E13):DA(D22) DA(E14):DT(D21) DT(E15):DA(D20) DG(E16):DC(D19) DT(E17):DA(D18) DT(E18):DA(D17) DT(E19):DA(D16) DA(E20):DT(D15) DA(E21):DT(D14) DC(E22):DG(D13) DC(E23):DG(D12) DT(E24):DA(D11) DG(E25):DC(D10) DA(E26):DT(D9) DC(E27):DG(D8) DA(E28):DT(D7) DT(E29):DA(D6) DT(E30):DA(D5) DT(E31):DA(D4) DC(E32):DG(D3) DC(E33):DG(D2) DG(E34):DC(D1) chainA ( 21) ASN22 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 0 0 0 0 0 10 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ASN24 0 0 0 0 0 0 0 0 0 4 5 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) SER27 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) GLN28 0 0 0 0 0 0 0 4 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ASN76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 77) GLU78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 9 2 0 0 0 0 0 0 0 0 ( 80) ALA81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 81) HIS82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 7 5 0 0 0 0 0 0 0 ( 85) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 ( 86) PHE87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (100) LYS101 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gkinlnqiytakemserigkNRNylSQayRnnkheilknfnyrkiggtiifsdnpnndlsqlitakeasqllgkNdEyfAHiykRFphrlegidhiytgKtlfltkeslevfkkk >6g2q_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH A DIDEOXY TERMINATED PRIMER WITH CHCL (S-ISOMER), BETA, GAMMA DTTP ANALOGUE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 45 0 0 0 0 ( 26) LYS35 6 0 0 0 0 ( 29) ALA38 1 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6g3b_A: title=AVAII RESTRICTION ENDONUCLEASE IN COMPLEX WITH AN RNA/DNA HYBRID organism=Nostoc sp. PCC 7120 DNA sequence DC(D1) DC(D2) DA(D3) DT(D4) DG(D5) DG(D6) DT(D7) DC(D8) DC(D9) DT(D10) DA(D11) chainA (163) GLU169 0 0 0 2 1 0 0 0 0 0 0 prot.sequence gskfiqnaaeiakkamdsvdpslsekftivirfltdnpdaasalsivgteeyiiasatnfkkgrdprtplppstipdemvsvilnkyfevpseelekaeewhrlsmgaenivgdlleryiaeviephgwiwcsgsmvravdfiycdsenvwqslqvknrdntEnsssaairhgtpikkwfrtfskkrgdnwdkfpslegkenlsekgfklyvekylsalraikal >6g3b_AB: title=AVAII RESTRICTION ENDONUCLEASE IN COMPLEX WITH AN RNA/DNA HYBRID organism=Nostoc sp. PCC 7120 DNA sequence DC(D1) DC(D2) DA(D3) DT(D4) DG(D5) DG(D6) DT(D7) DC(D8) DC(D9) DT(D10) DA(D11) chainA (163) GLU169 0 0 0 2 1 0 0 0 0 0 0 chainB (161) ASN167 0 0 0 0 0 0 0 0 2 0 0 prot.sequence gskfiqnaaeiakkamdsvdpslsekftivirfltdnpdaasalsivgteeyiiasatnfkkgrdprtplppstipdemvsvilnkyfevpseelekaeewhrlsmgaenivgdlleryiaeviephgwiwcsgsmvravdfiycdsenvwqslqvknrdntEnsssaairhgtpikkwfrtfskkrgdnwdkfpslegkenlsekgfklyvekylsalraikal/skfiqnaaeiakkamdsvdpslsekftivirfltdnpdaasalrsivgteeyiiasatnfkkgrdprtplppstipdemvsvilnkyfevpseelekaeewhrlsmgaEnivgdlleryiaeviephgwiwcsgsmvravdfiycdsenvwqslqvknrdNtensssaairhgtpikkwfrtfskkrgdnwdkfpslegkenlsekgfklyvekylsalraikal >6gat_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=SOLUTION NMR STRUCTURE OF THE L22V MUTANT DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13 BP DNA CONTAINING A TGATA SITE, REGULARIZED MEAN STRUCTURE organism=EMERICELLA NIDULANS DNA sequence DC(B101):DG(C126) DA(B102):DT(C125) DG(B103):DC(C124) DT(B104):DA(C123) DG(B105):DC(C122) DA(B106):DT(C121) DT(B107):DA(C120) DA(B108):DT(C119) DG(B109):DC(C118) DA(B110):DT(C117) DG(B111):DC(C116) DA(B112):DT(C115) DC(B113):DG(C114) chainA ( 22) VAL22 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 24) ARG24 0 0 0 12 12 1 0 0 0 0 0 0 0 ( 34) ASN34 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 38) LEU38 0 0 0 0 0 4 7 0 0 0 0 0 0 ( 39) PHE39 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 7 0 0 0 0 prot.sequence mkngeqngpttctncftqttpVwRrnpegqplcNacgLFlklhgvvrplslktdvikkRnrnsans >6gcd_AB: title=DNA BINDING DOMAIN OF RESTRICTION ENDONUCLEASE MCRBC IN COMPLEX WITH 5-HYDROXYMETHYLCYTOSINE DNA organism=Escherichia coli DNA sequence DG(C2):DC(D13) DA(C3):DT(D12) DG(C4):DC(D11) DA(C5):DT(D10) DC(C7):DG(D9) DG(C8):DG(D8) DG(C9):DC(D7) DT(C10):DA(D5) DA(C11):DT(D4) DG(C12):DC(D3) DC(C13):DG(D2) chainA ( 21) GLN21 0 0 0 0 0 0 0 1 0 0 0 ( 41) TYR41 0 0 0 0 0 0 21 45 0 0 0 ( 43) ASN43 0 0 0 0 0 9 4 0 0 0 0 chainB ( 21) GLN21 0 0 0 2 0 0 0 0 0 0 0 ( 41) TYR41 0 0 0 43 21 0 0 0 0 0 0 ( 43) ASN43 0 0 0 0 5 10 0 0 0 0 0 prot.sequence mesiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipwfaflgegqeasngiypvilyykdfdelvlaygisdtnephaqwqfssdipktiaeyfqatsgvypkkygqsyyasqkvsqgidytrfasmldniindyklifnsgksvi/mesiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipwfaflgegqeasngiypvilyykdfdelvlaygisdtnephaqwqfssdipktiaeyfqatsgvypkkygqsyyasqkvsqgidytrfasmldniindyklifn >6gcd_B: title=DNA BINDING DOMAIN OF RESTRICTION ENDONUCLEASE MCRBC IN COMPLEX WITH 5-HYDROXYMETHYLCYTOSINE DNA organism=Escherichia coli DNA sequence DG(C2):DC(D13) DA(C3):DT(D12) DG(C4):DC(D11) DA(C5):DT(D10) DC(C7):DG(D9) DG(C8):DG(D8) DG(C9):DC(D7) DT(C10):DA(D5) DA(C11):DT(D4) DG(C12):DC(D3) DC(C13):DG(D2) chainB ( 21) GLN21 0 0 0 2 0 0 0 0 0 0 0 ( 41) TYR41 0 0 0 43 21 0 0 0 0 0 0 ( 43) ASN43 0 0 0 0 5 10 0 0 0 0 0 prot.sequence mesiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipwfaflgegqeasngiypvilyykdfdelvlaygisdtnephaqwqfssdipktiaeyfqatsgvypkkygqsyyasqkvsqgidytrfasmldniindyklifn >6gce_AB: title=DNA BINDING DOMAIN OF RESTRICTION ENDONUCLEASE MCRBC IN COMPLEX WITH 5-FORMYLCYTOSINE DNA organism=Escherichia coli DNA sequence DG(C2):DC(D13) DA(C3):DT(D12) DG(C4):DC(D11) DA(C5):DT(D10) DC(C6):DG(D9) DC(C7):DG(D8) DG(C8):DC(D7) DG(C9):DA(D5) DT(C10):DT(D4) DA(C11):DC(D3) DG(C12):DG(D2) chainA ( 21) GLN21 0 0 0 0 0 0 0 0 3 0 0 ( 41) TYR41 0 0 0 0 0 0 18 41 3 0 0 ( 43) ASN43 0 0 0 0 0 6 9 0 0 0 0 chainB ( 21) GLN21 0 0 0 3 0 0 0 0 0 0 0 ( 41) TYR41 0 0 0 37 3 17 0 0 0 0 0 ( 43) ASN43 0 0 0 0 0 10 6 0 0 0 0 ( 49) TRP49 0 0 0 0 2 0 0 0 0 0 0 ( 60) SER60 0 0 0 0 1 0 0 0 0 0 0 ( 64) TYR64 0 0 0 0 8 0 0 0 0 0 0 ( 83) SER83 0 0 0 0 3 0 0 0 0 0 0 ( 84) ASP84 0 0 0 0 4 0 0 0 0 0 0 ( 85) THR85 0 0 0 0 4 0 0 0 0 0 0 (117) TYR117 0 0 0 0 20 0 0 0 0 0 0 prot.sequence mesiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipwfaflgegqeasngiypvilyykdfdelvlaygisdtnephaqwqfssdipktiaeyfqatsgvypkkygqsyyacsqkvsqgidytrfasmldniindyklifnsgksv/mesiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipWfaflgegqeaSngiYpvilyykdfdelvlaygiSDTnephaqwqfssdipktiaeyfqatsgvypkkYgqsyyacsqkvsqgidytrfasmldniindyklifnsgksv >6gce_B: title=DNA BINDING DOMAIN OF RESTRICTION ENDONUCLEASE MCRBC IN COMPLEX WITH 5-FORMYLCYTOSINE DNA organism=Escherichia coli DNA sequence DG(D2):DC(C13) DC(D3):DG(C12) DT(D4):DA(C11) DA(D5):DT(C10) DC(D7):DG(C9) DG(D8):DG(C8) DG(D9):DC(C7) DT(D10):DC(C6) DC(D11):DA(C5) DT(D12):DG(C4) DC(D13):DA(C3) chainB ( 21) GLN21 0 0 0 0 0 0 0 3 0 0 0 ( 41) TYR41 0 0 0 0 0 0 20 3 34 0 0 ( 43) ASN43 0 0 0 0 0 11 5 0 0 0 0 ( 49) TRP49 0 0 0 0 0 0 0 2 0 0 0 ( 60) SER60 0 0 0 0 0 0 0 1 0 0 0 ( 64) TYR64 0 0 0 0 0 0 0 8 0 0 0 ( 83) SER83 0 0 0 0 0 0 0 3 0 0 0 ( 84) ASP84 0 0 0 0 0 0 0 4 0 0 0 ( 85) THR85 0 0 0 0 0 0 0 4 0 0 0 (117) TYR117 0 0 0 0 0 0 0 20 0 0 0 prot.sequence mesiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipWfaflgegqeaSngiYpvilyykdfdelvlaygiSDTnephaqwqfssdipktiaeyfqatsgvypkkYgqsyyacsqkvsqgidytrfasmldniindyklifnsgksv >6gcf_AB: title=DNA BINDING DOMAIN OF RESTRICTION ENDONUCLEASE MCRBC IN COMPLEX WITH N4-METHYLCYTOSINE DNA organism=Escherichia coli DNA sequence DG(D2):DC(C13) DC(D3):DG(C12) DT(D4):DA(C11) DA(D5):DT(C10) DC(D7):DG(C9) DG(D8):DG(C8) DG(D9):DC(C7) DT(D10):DC(C6) DC(D11):DA(C5) DT(D12):DG(C4) DC(D13):DA(C3) chainA ( 20) GLN21 0 0 0 3 0 0 0 0 0 0 0 ( 40) TYR41 0 0 0 46 19 0 0 0 0 0 0 ( 42) ASN43 0 0 0 0 4 11 0 0 0 0 0 chainB ( 19) GLN21 0 0 0 0 0 0 0 2 0 0 0 ( 39) TYR41 0 0 0 0 0 0 20 2 39 0 0 ( 41) ASN43 0 0 0 0 0 10 4 0 0 0 0 ( 47) TRP49 0 0 0 0 0 0 0 6 0 0 0 ( 57) ALA59 0 0 0 0 0 0 0 1 0 0 0 ( 62) TYR64 0 0 0 0 0 0 0 8 0 0 0 ( 81) SER83 0 0 0 0 0 0 0 1 0 0 0 ( 82) ASP84 0 0 0 0 0 0 0 4 0 0 0 ( 83) THR85 0 0 0 0 0 0 0 4 0 0 0 (115) TYR117 0 0 0 0 0 0 0 26 0 0 0 prot.sequence esiqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipwfaflgegqeasngiypvilyykdfdelvlaygisdtnephaqwqfssdipktiaeyfqatsgvypkkygqsyyacsqkvsqgidytrfasmldniindyklifnsgksvi/siqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipWfaflgegqeAsngiYpvilyykdfdelvlaygiSDTnephaqwqfssdipktiaeyfqatsgvypkkYgqsyyacsqkvsqgidytrfasmldniindykl >6gcf_B: title=DNA BINDING DOMAIN OF RESTRICTION ENDONUCLEASE MCRBC IN COMPLEX WITH N4-METHYLCYTOSINE DNA organism=Escherichia coli DNA sequence DG(C2):DC(D13) DA(C3):DT(D12) DG(C4):DC(D11) DA(C5):DT(D10) DC(C6):DG(D9) DC(C7):DG(D8) DG(C8):DC(D7) DG(C9):DA(D5) DT(C10):DT(D4) DA(C11):DC(D3) DG(C12):DG(D2) chainB ( 19) GLN21 0 0 0 2 0 0 0 0 0 0 0 ( 39) TYR41 0 0 0 41 3 17 0 0 0 0 0 ( 41) ASN43 0 0 0 0 0 8 6 0 0 0 0 ( 47) TRP49 0 0 0 0 6 0 0 0 0 0 0 ( 57) ALA59 0 0 0 0 1 0 0 0 0 0 0 ( 62) TYR64 0 0 0 0 8 0 0 0 0 0 0 ( 81) SER83 0 0 0 0 1 0 0 0 0 0 0 ( 82) ASP84 0 0 0 0 4 0 0 0 0 0 0 ( 83) THR85 0 0 0 0 4 0 0 0 0 0 0 (115) TYR117 0 0 0 0 26 0 0 0 0 0 0 prot.sequence siqpwiekfikqaqqqrsQstkdyptsyrnlrvklsfgYgNftsipWfaflgegqeAsngiYpvilyykdfdelvlaygiSDTnephaqwqfssdipktiaeyfqatsgvypkkYgqsyyacsqkvsqgidytrfasmldniindykl >6gdr_A:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=DNA BINDING WITH A MINIMAL SCAFFOLD: STRUCTURE-FUNCTION ANALYSIS OF LIG E DNA LIGASES organism=ALTEROMONAS MEDITERRANEA DNA sequence DT(B1):DA(D42) DT(B2):DA(D41) DC(B3):DG(D40) DC(B4):DG(D39) DG(B5):DC(D38) DA(B6):DT(D37) DT(B7):DA(D36) DA(B8):DT(D35) DG(B9):DC(D34) DT(B10):DA(D33) DG(B11):DC(D32) DG(B12):DC(C31) DG(B13):DC(C30) DG(B14):DC(C29) DT(B15):DA(C28) DC(B16):DG(C27) DG(B17):DC(C26) DC(B18):DG(C25) DA(B19):DT(C24) DA(B20):DT(C23) DT(B21):DA(C22) chainA ( 73) PHE81 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (195) LYS229 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (217) THR251 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 (249) PHE283 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 prot.sequence ivdglqlakqyghqdiniaeywvsekldgirarwdgtelrtrnnnkidapawftanwpkatidgelwiargqFertasivlskltlpskrwakvrfmafdmpvagqsfdsrlnmlnnlkeatpnptfavvsqftlssvnaleekleqvtlsggeglmlhhkkafyhsgrsdklikvkqfedaeakvlahfagkgKfkgmmgsllvetpagvqfklgTgfsekerrappavgswvtfkfygvtkngkprFasflrvr >6ged_A:V-region_of_surface_antigen_I/II_SA_I/II,_PAC; title=ADHESIN DOMAIN OF PRGB FROM ENTEROCOCCUS FAECALIS BOUND TO DNA organism=ENTEROCOCCUS FAECALIS DNA sequence DG(C1):DC(D10) DG(C2):DC(D9) DG(C3):DC(D8) DC(C4):DG(D7) DG(C5):DC(D6) DG(C6):DC(D5) DC(C7):DG(D4) DC(C8):DG(D3) DC(C9):DG(D2) DG(C10):DC(D1) chainA ( 23) LYS282 0 0 0 0 0 0 0 0 0 5 ( 24) ASP283 0 0 0 0 0 0 2 0 0 0 prot.sequence nensyvneaisknlvfdqsvvtKDtkissikggkfikatdfnkvnagdskdiftklrkdmggkatgnfqnsfvkeanlgsnggyavlleknkpvtvtytglnasylgrkitkaefvyelqsspsqsgtlnavfsndpiitafigtnrvngkdvktrltikffdasgkevlpdkdspfayalsslnssltnkgghaefvsdfgannafkyingsyvkkqadgkfyspedidygtgpsglknsdwdavghknayfgsgvglangrisfsfgmttkgksnvpvssaqwfafstnlnaq >6gfw_CDM: title=CRYO-EM STRUCTURE OF BACTERIAL RNA POLYMERASE-SIGMA54 HOLOENZYME INITIAL TRANSCRIBING COMPLEX organism=ESCHERICHIA COLI K-12 / KLEBSIELLA PNEUMONIAE DNA sequence DT(F-20):DA(G20) DG(F-19):DC(G19) DC(F-18):DG(G18) DG(F-17):DC(G17) DC(F-16):DG(G16) DA(F-15):DT(G15) DA(F-14):DT(G14) DC(F-13):DG(G13) DA(F-12):DT(G12) DG(F-11):DC(G11) DC(F-10):DG(G10) DA(F-9):DT(G9) DT(F-8):DA(G8) DG(F-7):DC(G7) DC(F-6):DG(G6) DG(F-5):DC(G5) DC(F-4):DG(G4) DG(F-3):DC(G3) DC(F-2):DG(G2) DC(F-1):DG(G1) DC(F0):DG(G0) DA(F1):DG(G-1) DG(F2):DA(G-2) DG(F3):DA(G-3) DG(F4):DA(G-4) DC(F5):DT(G-5) DT(F6):DC(G-6) DG(F7):DA(G-7) DA(F8):DG(G-8) DT(F9):DC(G-9) DC(F10):DT(G-10) DG(F11):DC(G-11) DT(F12):DA(G-12) DG(F13):DC(G-13) DC(F14):DG(G-14) DA(F15):DT(G-15) DA(F16):DT(G-16) DA(F17):DT(G-17) DA(F18):DT(G-18) DG(F19):DC(G-19) DT(F20):DA(G-20) DC(F21):DG(G-21) DG(F22):DC(G-22) DT(F23):DA(G-23) DG(F24):DC(G-24) DC(F25):DG(G-25) DC(F26):DG(G-26) DA(F27):DT(G-27) DG(F28):DC(G-28) DC(F29):DG(G-29) chainC (183) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (384) LEU384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) ASN387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) THR539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (542) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (264) ASP267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (268) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (787) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (788) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 1) TYR104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) GLN105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) PRO110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) VAL111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) ALA310 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) TRP328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) SER332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) LEU333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) LEU367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (272) HIS377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (274) SER379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) THR380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) SER382 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ALA454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (349) ARG456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 (350) THR457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 prot.sequence mvysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaesLfeNlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpgglTreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/llkflkaqtkteefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlnDlyRRvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraiTgSnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqsslvvldsaerrpalkivdaqgndvaqyflpgkaivqledgvqissgdtlaripqditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/YQddeLPVyqgettqtlqdylmwqveltpftdtdraiatsivdavddtgyltiqiedivdsigddeigleeveavlkriqrfdpvgvaakdlrdclliqlsqfaketpwleearliisdhldllanhdfrtlmrvtrlkeevlkeavnliqsldxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxsiprlkinqqyaamgnsArndadgqfirsnlqeaRWliKSLesandtllrvsrciveqqqaffeqgeeymkpmvLadiaqavemHeSTiSRvttqkylhsprgixxxxxxxxxxxxxxxxasstairalvkkliaaenpakplsdskltsmlseqgimvArRTvakyreslsippsnqr >6gfw_M: title=CRYO-EM STRUCTURE OF BACTERIAL RNA POLYMERASE-SIGMA54 HOLOENZYME INITIAL TRANSCRIBING COMPLEX organism=? DNA sequence DT(F-20):DA(G20) DG(F-19):DC(G19) DC(F-18):DG(G18) DG(F-17):DC(G17) DC(F-16):DG(G16) DA(F-15):DT(G15) DA(F-14):DT(G14) DC(F-13):DG(G13) DA(F-12):DT(G12) DG(F-11):DC(G11) DC(F-10):DG(G10) DA(F-9):DT(G9) DT(F-8):DA(G8) DG(F-7):DC(G7) DC(F-6):DG(G6) DG(F-5):DC(G5) DC(F-4):DG(G4) DG(F-3):DC(G3) DC(F-2):DG(G2) DC(F-1):DG(G1) DC(F0):DG(G0) DA(F1):DG(G-1) DG(F2):DA(G-2) DG(F3):DA(G-3) DG(F4):DA(G-4) DC(F5):DT(G-5) DT(F6):DC(G-6) DG(F7):DA(G-7) DA(F8):DG(G-8) DT(F9):DC(G-9) DC(F10):DT(G-10) DG(F11):DC(G-11) DT(F12):DA(G-12) DG(F13):DC(G-13) DC(F14):DG(G-14) DA(F15):DT(G-15) DA(F16):DT(G-16) DA(F17):DT(G-17) DA(F18):DT(G-18) DG(F19):DC(G-19) DT(F20):DA(G-20) DC(F21):DG(G-21) DG(F22):DC(G-22) DT(F23):DA(G-23) DG(F24):DC(G-24) DC(F25):DG(G-25) DC(F26):DG(G-26) DA(F27):DT(G-27) DG(F28):DC(G-28) DC(F29):DG(G-29) chainM ( 1) TYR104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) GLN105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) PRO110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) VAL111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) ALA310 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) TRP328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) SER332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) LEU333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) LEU367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (272) HIS377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (274) SER379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) THR380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) SER382 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ALA454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (349) ARG456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 (350) THR457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 prot.sequence YQddeLPVyqgettqtlqdylmwqveltpftdtdraiatsivdavddtgyltiqiedivdsigddeigleeveavlkriqrfdpvgvaakdlrdclliqlsqfaketpwleearliisdhldllanhdfrtlmrvtrlkeevlkeavnliqsldxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxsiprlkinqqyaamgnsArndadgqfirsnlqeaRWliKSLesandtllrvsrciveqqqaffeqgeeymkpmvLadiaqavemHeSTiSRvttqkylhsprgixxxxxxxxxxxxxxxxasstairalvkkliaaenpakplsdskltsmlseqgimvArRTvakyreslsippsnqr >6gh5_CDM: title=CRYO-EM STRUCTURE OF BACTERIAL RNA POLYMERASE-SIGMA54 HOLOENZYME TRANSCRIPTION OPEN COMPLEX organism=KLEBSIELLA PNEUMONIAE / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(F-16):DG(G16) DA(F-15):DT(G15) DC(F-13):DG(G13) DA(F-12):DT(G12) DG(F-11):DC(G11) DC(F-10):DG(G10) DA(F-9):DT(G9) DT(F-8):DA(G8) DG(F-7):DC(G7) DC(F-6):DG(G6) DG(F-5):DC(G5) DC(F-4):DG(G4) DG(F-3):DC(G3) DC(F-2):DG(G2) DC(F-1):DG(G1) DC(F0):DG(G0) DA(F1):DG(G-1) DG(F2):DA(G-2) DG(F3):DA(G-3) DG(F4):DA(G-4) DC(F5):DT(G-5) DT(F6):DC(G-6) DG(F7):DA(G-7) DA(F8):DG(G-8) DT(F9):DC(G-9) DC(F10):DT(G-10) DG(F11):DC(G-11) DT(F12):DA(G-12) DG(F13):DC(G-13) DC(F14):DG(G-14) DA(F15):DT(G-15) DA(F16):DT(G-16) DA(F17):DT(G-17) DA(F18):DT(G-18) DG(F19):DC(G-19) DT(F20):DA(G-20) DC(F21):DG(G-21) DG(F22):DC(G-22) DT(F23):DA(G-23) DG(F24):DC(G-24) DC(F25):DG(G-25) DC(F26):DG(G-26) DA(F27):DT(G-27) DG(F28):DC(G-28) DC(F29):DG(G-29) chainC (151) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (451) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (538) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (542) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) GLU546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (547) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (250) VAL253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) ALA261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) THR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) ASP267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ARG322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) LYS334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 3) GLU108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) PRO110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) TRP328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) SER379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) THR380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) LYS388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) ARG456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 (322) THR457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence mvysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtrERagfEVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/llkflkaqtkteefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplVpldggrfATsdlnDlyRrvinrnnrlkRlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkRplksladmikgKqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqsslvvldsaerrpalkivdaqgndvaqyflpgkaivqledgvqissgdtlaripqditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/ddELPvyqgettqtlqdylmwqveltpftdtdraiatsivdavddtgyltiqiedivdsigddeigleeveavlkriqrfdpvgvaakdlrdclliqlsqfaketpwleearliisdhldllanhdfrtlmrvtrlkeevlkeavnliqsldxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxrsnlqearWlikslesandtllrvsrciveqqqaffeqgeeymkpmvladiaqavemheSTisrvttqKylhsprgixxxxxxxxxxxxxxxxasstairalvkkliaaenpakplsdskltsmlseqgimvarRTvakyreslsippsnqr >6gh5_M: title=CRYO-EM STRUCTURE OF BACTERIAL RNA POLYMERASE-SIGMA54 HOLOENZYME TRANSCRIPTION OPEN COMPLEX organism=KLEBSIELLA PNEUMONIAE DNA sequence DG(G-29):DC(F29) DC(G-28):DG(F28) DT(G-27):DA(F27) DG(G-26):DC(F26) DG(G-25):DC(F25) DC(G-24):DG(F24) DA(G-23):DT(F23) DC(G-22):DG(F22) DG(G-21):DC(F21) DA(G-20):DT(F20) DC(G-19):DG(F19) DT(G-18):DA(F18) DT(G-17):DA(F17) DT(G-16):DA(F16) DT(G-15):DA(F15) DG(G-14):DC(F14) DC(G-13):DG(F13) DA(G-12):DT(F12) DC(G-11):DG(F11) DT(G-10):DC(F10) DC(G-9):DT(F9) DG(G-8):DA(F8) DA(G-7):DG(F7) DC(G-6):DT(F6) DT(G-5):DC(F5) DA(G-4):DG(F4) DA(G-3):DG(F3) DA(G-2):DG(F2) DG(G-1):DA(F1) DG(G0):DC(F0) DG(G1):DC(F-1) DG(G2):DC(F-2) DC(G3):DG(F-3) DG(G4):DC(F-4) DC(G5):DG(F-5) DG(G6):DC(F-6) DC(G7):DG(F-7) DA(G8):DT(F-8) DT(G9):DA(F-9) DG(G10):DC(F-10) DC(G11):DG(F-11) DT(G12):DA(F-12) DG(G13):DC(F-13) DT(G15):DA(F-15) DG(G16):DC(F-16) chainM ( 3) GLU108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) PRO110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) TRP328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) SER379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) THR380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) LYS388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) ARG456 0 0 0 0 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (322) THR457 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ddELPvyqgettqtlqdylmwqveltpftdtdraiatsivdavddtgyltiqiedivdsigddeigleeveavlkriqrfdpvgvaakdlrdclliqlsqfaketpwleearliisdhldllanhdfrtlmrvtrlkeevlkeavnliqsldxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxrsnlqearWlikslesandtllrvsrciveqqqaffeqgeeymkpmvladiaqavemheSTisrvttqKylhsprgixxxxxxxxxxxxxxxxasstairalvkkliaaenpakplsdskltsmlseqgimvarRTvakyreslsippsnqr >6gh6_DM: title=CRYO-EM STRUCTURE OF BACTERIAL RNA POLYMERASE-SIGMA54 HOLOENZYME INTERMEDIATE PARTIALLY LOADED COMPLEX organism=KLEBSIELLA PNEUMONIAE / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(T-12):DT(N12) DG(T-11):DC(N11) DC(T-10):DG(N10) DA(T-9):DT(N9) DT(T-8):DA(N8) DG(T-7):DC(N7) DC(T-6):DG(N6) DG(T-5):DC(N5) DC(T-4):DG(N4) DG(T-3):DC(N3) DC(T-2):DG(N2) DC(T-1):DG(N1) DC(T0):DG(N0) DA(T1):DG(N-1) DG(T2):DA(N-2) DG(T3):DA(N-3) DG(T4):DA(N-4) DC(T5):DT(N-5) DT(T6):DC(N-6) DG(T7):DA(N-7) DA(T8):DG(N-8) DT(T9):DC(N-9) DC(T10):DT(N-10) DG(T11):DC(N-11) DT(T12):DA(N-12) DG(T13):DC(N-13) DC(T14):DG(N-14) DA(T15):DT(N-15) DA(T16):DT(N-16) DA(T17):DT(N-17) DA(T18):DT(N-18) DG(T19):DC(N-19) DT(T20):DA(N-20) DC(T21):DG(N-21) DG(T22):DC(N-22) DT(T23):DA(N-23) DG(T24):DC(N-24) DC(T25):DG(N-25) DC(T26):DG(N-26) DA(T27):DT(N-27) DG(T28):DC(N-28) DC(T29):DG(N-29) DC(T30):DG(N-30) DG(T31):DC(N-31) chainD chainM (180) ALA336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) SER379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) THR380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ARG456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (299) THR457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence teefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqslvvldsaerrpalkivdaqgndvaqyflpgkaivqledgvqissgdtlaripqditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/ettqtlqdylmwqveltpftdtdraiatsivdavddtgyltiqiedivdsigddeigleeveavlkriqrfdpvgvaakdlrdclliqlsqfaketpwleearliisdhldllanhdfrtlmrvtrlkeevlkeavnliqsldxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxsAndtllrvsrciveqqqaffeqgeeymkpmvladiaqavemheSTisrvttqkylhsprgixxxxxxxxxxxxxxxxasstairalvkkliaaenpakplsdskltsmlseqgimvarRTvakyreslsippsnqr >6gh6_M: title=CRYO-EM STRUCTURE OF BACTERIAL RNA POLYMERASE-SIGMA54 HOLOENZYME INTERMEDIATE PARTIALLY LOADED COMPLEX organism=KLEBSIELLA PNEUMONIAE DNA sequence DA(T-12):DT(N12) DG(T-11):DC(N11) DC(T-10):DG(N10) DA(T-9):DT(N9) DT(T-8):DA(N8) DG(T-7):DC(N7) DC(T-6):DG(N6) DG(T-5):DC(N5) DC(T-4):DG(N4) DG(T-3):DC(N3) DC(T-2):DG(N2) DC(T-1):DG(N1) DC(T0):DG(N0) DA(T1):DG(N-1) DG(T2):DA(N-2) DG(T3):DA(N-3) DG(T4):DA(N-4) DC(T5):DT(N-5) DT(T6):DC(N-6) DG(T7):DA(N-7) DA(T8):DG(N-8) DT(T9):DC(N-9) DC(T10):DT(N-10) DG(T11):DC(N-11) DT(T12):DA(N-12) DG(T13):DC(N-13) DC(T14):DG(N-14) DA(T15):DT(N-15) DA(T16):DT(N-16) DA(T17):DT(N-17) DA(T18):DT(N-18) DG(T19):DC(N-19) DT(T20):DA(N-20) DC(T21):DG(N-21) DG(T22):DC(N-22) DT(T23):DA(N-23) DG(T24):DC(N-24) DC(T25):DG(N-25) DC(T26):DG(N-26) DA(T27):DT(N-27) DG(T28):DC(N-28) DC(T29):DG(N-29) DC(T30):DG(N-30) DG(T31):DC(N-31) chainM (180) ALA336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) SER379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) THR380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ARG456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (299) THR457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence ettqtlqdylmwqveltpftdtdraiatsivdavddtgyltiqiedivdsigddeigleeveavlkriqrfdpvgvaakdlrdclliqlsqfaketpwleearliisdhldllanhdfrtlmrvtrlkeevlkeavnliqsldxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxsAndtllrvsrciveqqqaffeqgeeymkpmvladiaqavemheSTisrvttqkylhsprgixxxxxxxxxxxxxxxxasstairalvkkliaaenpakplsdskltsmlseqgimvarRTvakyreslsippsnqr >6gmh_ABEUZ:Translation_proteins_SH3-like_domain; title=STRUCTURE OF ACTIVATED TRANSCRIPTION COMPLEX POL II-DSIF-PAF-SPT6 organism=SUS SCROFA / HOMO SAPIENS DNA sequence DC(T12):DC(N48) DC(T13):DG(N47) DT(T14):DA(N46) DG(T15):DG(N45) DC(T16):DG(N44) DT(T17):DG(N43) DG(T18):DT(N42) DG(T19):DC(N41) DC(T20):DG(N40) DT(T21):DA(N39) DC(T22):DG(N38) DC(T23):DG(N37) DG(T24):DG(N36) DA(T25):DA(N35) DG(T26):DC(N34) DT(T27):DG(N33) DG(T28):DA(N32) DG(T29):DC(N31) DG(T30):DC(N30) DT(T31):DG(N29) DT(T32):DA(N28) DC(T33):DG(N27) DT(T34):DG(N26) DG(T35):DC(N14) DC(T36):DG(N13) DC(T37):DG(N12) DG(T38):DC(N11) DC(T39):DG(N10) DT(T40):DA(N9) DC(T41):DG(N8) DT(T42):DA(N7) DC(T43):DG(N6) DA(T44):DT(N5) DA(T45):DT(N4) DT(T46):DA(N3) DG(T47):DC(N2) DG(T48):DC(N1) chainA (220) GLN267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (804) THR854 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (805) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1339) ARG1416 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE chainU chainZ prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmQrnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeipgapaygawspsvgsgmtpgaagfpsaasd/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmLaraigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeaFviqeqnvalnfigsrgakpgvtkekrikyakeVlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriIsdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskgfdqeevfekpTRetcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq/xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx/dpnlwtvkckigeerataislmrkfiayqftdtplqiksvvapehvkgyiyveaykqthvkqaiegvgnlrlgywnqqmvpikemtdvlkvvkanlkpkswvrlkrgiykddiaqvdyvepsqntislkmipridydrikappqrlfdaekirslggdvasdgdflifegnrysrkgflfksfamsavitegvkptlselekfrehnfqpgdnvevcegElinlqgkilsvdgnkitimpkhedlkdmlefpaqelrkyfkmgdhvkviagrfegdtgliVrveenfvilfsdltmhelkvlprdlqlcsetaSgvdvggqhewgelvqldpqtvgvivrleretfqvlnmygkvvtvrhqavtrkkdnrfavaldseqnnihvkdivkvidgphsgregeirhlfrsfafLhckklvenggmfvcktrhlvlaneligqtvrisqgpykgyigvvkdatestarvelhstcqtisvdrqrlttvg >6gml_ABEZ:Translation_proteins_SH3-like_domain; title=STRUCTURE OF PAUSED TRANSCRIPTION COMPLEX POL II-DSIF-NELF organism=SUS SCROFA / HOMO SAPIENS DNA sequence DC(N4):DG(T36) DA(N5):DA(T35) DC(N6):DC(T34) DT(N7):DC(T33) DA(N8):DT(T32) DG(N9):DT(T31) DT(N10):DG(T30) DA(N11):DG(T29) DC(N12):DG(T28) DC(N13):DT(T27) DT(N14):DG(T26) DA(N24):DA(T25) DG(N25):DC(T24) DC(N26):DG(T23) DT(N27):DA(T22) DT(N28):DA(T21) DA(N29):DT(T20) DA(N30):DT(T19) DG(N31):DC(T18) DC(N32):DG(T17) DC(N33):DG(T16) DT(N34):DA(T15) DC(N35):DG(T14) DA(N36):DT(T13) DA(N37):DT(T12) DT(N38):DA(T11) DA(N39):DT(T10) DA(N40):DT(T9) DA(N41):DT(T8) DG(N42):DC(T7) DC(N43):DG(T6) DT(N44):DA(T5) DT(N45):DA(T4) DG(N46):DC(T3) DC(N47):DG(T2) DC(N48):DG(T1) chainA (139) LYS149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (801) THR854 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (802) ALA855 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1336) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1337) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (440) ASP492 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) LYS494 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainZ prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlcKgknggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavrnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqppryllkfeqiylskpthwdgapspmmpnearlrnltysaplyvditktvqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdaragvsqvlnrltfastlshlrrlnspigrDgKlakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq/dpnlwtvkckigeerataislmrkfiayqftdtplqiksvvapehvkgyiyveaykqthvkqaiegvgnlrlgywnqqmvpikemtdvlkvvkkswvrlkrgiykddiaqvdyvepsqntislkmipridydrikappqrlfdaekirslggdvasdgdflifegnrysrkflfksfamsavitegvkptlselekfrehnfqpgdnvevcegelinlqgkilsvdgnkitimpkhedlkdmlefpaqelrkyfkmgdhvkviagrfegdtglivrveenfvilfsdltmhelkvlprdlqlcsetasgwgelvqldpqtvgvivrleretfqvlnmygkvvtvrhqvtrkkdnrfavaldseqnnihvkdivkvidgphsgregeirhlfrsfaflhckklvenggmfvcktrhlvlaneligqtvrisqgpykgyigVvKdatestarvelhstcqtisvdrqrlttv >6gn7_HL:Trypsin-like_serine_proteases; title=X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA THROMBIN AND NU172, A DUPLEX/QUADRUPLEX 26-MER DNA APTAMER, IN THE PRESENCE OF SODIUM IONS. organism=HOMO SAPIENS DNA sequence DC(E1):DG(E26) DG(E2):DC(E25) DC(E3):DG(E24) DC(E4):DG(E23) DT(E5):DA(E15) DA(E6):DT(E22) DG(E16):DG(E21) DG(E17):DG(E20) DG(E11):DG(E8) DG(E12):DG(E7) chainL chainH ( 70) ARG75 0 0 0 0 0 0 0 7 27 0 ( 73) ARG77A 0 0 0 0 0 0 0 7 14 0 prot.sequence ivegsdaeigmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkhsrtRyeRniekismlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfg/tfgsgeadcglrplfekksledkterellesyi >6go5_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TDT CHIMERA (LOOP1 OF POL MU) - TERNARY COMPLEX WITH 1-NT GAPPED DNA SUBSTRATE organism=? DNA sequence DA(G1):DG(H6) DC(G2):DG(H5) DA(G3):DT(H4) DG(G4):DC(H3) DC(G5):DG(H2) DG(G6):DC(H1) chainA ( 39) SER187 0 6 0 0 0 0 ( 41) LEU189 0 3 0 0 0 0 ( 42) ALA190 0 4 0 0 0 0 ( 45) ARG193 0 5 0 0 0 0 (287) ARG455 8 0 0 0 0 0 (290) GLU458 3 0 0 0 0 0 (291) ARG459 20 0 0 0 0 0 (294) ARG462 6 0 0 0 0 0 prot.sequence kisqyacqrrttlnnynqlftdaldilaendelrenegScLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeaeeqqllhkvtdfwkqqglllyhqyhrshsstmdvfersfcilkldhgrvhqegkgwkairvdlvmcpydrrafallgwtgsRqfERdlRryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >6go6_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TDT CHIMERA (LOOP1 OF POL MU) - TERNARY COMPLEX WITH DOWNSTREAM DSDNA organism=MUS MUSCULUS DNA sequence DT(F1):DA(E5) DT(F2):DA(E4) DT(F3):DA(E3) DT(F4):DA(E2) DT(F5):DA(E1) chainA ( 40) SER187 0 0 0 0 2 ( 42) LEU189 0 0 0 0 2 ( 43) ALA190 0 0 0 0 4 ( 46) ARG193 0 0 0 0 2 prot.sequence kkisqyacqrrttlnnynqlftdaldilaendelrenegScLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllyhqyhrshladsahnlrqrsstmdvfersfcilkldhgrvhseegkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >6go7_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TDT CHIMERA (LOOP1 OF POL MU) - FULL DNA SYNAPSIS COMPLEX organism=MUS MUSCULUS DNA sequence DA(F1):DT(H5) DA(F2):DT(H4) DA(F3):DT(H3) DA(F4):DT(H2) DA(F5):DT(H1) chainA ( 41) LEU189 1 0 0 0 0 ( 42) ALA190 4 0 0 0 0 ( 45) ARG193 3 1 0 0 0 prot.sequence kisqyacqrrttlnnynqlftdaldilaendelrenegscLAfmRassvlkslpfpitsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllyhqyhrsfersfcilkldhgrvhsgkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna >6gov_GXY: title=STRUCTURE OF THE RNA POLYMERASE LAMBDA-BASED ANTITERMINATION COMPLEX organism=ESCHERICHIA COLI O157:H7 DNA sequence DC(K-20):DA(L35) DC(K-19):DG(L34) DG(K-18):DC(L33) DG(K-17):DA(L32) DC(K-16):DA(L31) DT(K-15):DT(L30) DC(K-14):DC(L29) DG(K-13):DC(L28) DT(K-12):DG(L27) DA(K-11):DC(L26) DT(K-10):DA(L25) DA(K-9):DC(L24) DA(K-8):DA(L23) DT(K-7):DC(L22) DC(K-4):DC(L21) DT(K-3):DG(L20) DT(K-2):DT(L19) DA(K-1):DA(L18) DT(K0):DA(L17) DG(K1):DC(L16) DT(K2):DA(L15) DG(K3):DC(L14) DA(K4):DT(L13) DG(K5):DC(L12) DC(K6):DG(L11) DG(K7):DC(L10) DG(K8):DC(L9) DA(K9):DT(L8) DT(K10):DA(L7) DA(K11):DT(L6) DA(K12):DT(L5) DC(K13):DG(L4) chainG chainX (151) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (451) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (538) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (542) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (547) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainY (246) ARG259 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG270 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (778) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence apkkrwyvvqafsgfegrvatslrehiklhnmeelfgevmvpteevvrrkserkffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqveka/mvysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/teefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnKrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >6grc_A:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=EUKARYOTIC JUNCTION-RESOLVING ENZYME GEN-1 BINDING WITH SODIUM organism=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) / Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) DNA sequence DA(R1):DT(H30) DC(R2):DG(H29) DC(R3):DG(H28) DC(R4):DT(H27) DA(R5):DT(H26) DC(R6):DG(H25) DC(R7):DG(H24) DA(R8):DT(H23) DC(R9):DG(H22) DC(R10):DG(H21) DG(R11):DC(H20) DC(R12):DG(H19) DT(R13):DA(H18) DC(R14):DG(H17) chainA (240) ARG256 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence gikgiykeigsgerislcklaidhleqhnrplrlaidmaiwqfqiqaarggsnpairtlfyrfvrllslgihpifvfdgpngvstamakrlirlfgftahdapgeaeaecayleqqgivdavlsedvdtimfgsrvtlrdwssegskggppthvtlhdakkiaegpsgldregmvlvalmsggdylpdgipgcgikvacqaakagfgkelcrikrdkeaitewkqrllhelrtnesgffRtkhkaleipenfpnmevlryythpvvsspatierlrqefppsstvdiaglreftretfdwtfrpgaiklikvlapgllvqrcldrkkeestlvkgismrrehfstdatpelrvsfipaelvgldpgqepevkpfdpwqpdlawvpetilklgvpvtvedweegqrs >6gtc_A: title=TRANSITION STATE STRUCTURE OF CPF1(CAS12A) I1 CONFORMATION organism=FRANCISELLA TULARENSIS SUBSP. NOVICIDA U112 DNA sequence DC(D-11):DG(C11) DG(D-10):DC(C10) DA(D-9):DT(C9) DG(D-8):DC(C8) DC(D-7):DG(C7) DT(D-6):DA(C6) DC(D-5):DG(C5) DG(D-4):DC(C4) DT(D-3):DA(C3) DT(D-2):DA(C2) DA(D-1):DT(C1) DG(D0):DC(C0) DA(D1):DT(C-1) DG(D2):DC(C-2) DA(D3):DT(C-3) DA(D4):DT(C-4) DG(D5):DC(C-5) chainA (180) LYS180 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (184) GLU184 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 3 0 (185) ASN185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (188) ASN188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (598) LYS613 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 0 0 (648) PRO663 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (651) ASN666 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 (652) LYS667 0 0 0 0 0 0 0 0 0 0 24 5 0 0 0 0 0 (653) MET668 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (656) LYS671 0 0 0 0 0 0 0 0 6 3 8 0 0 0 0 0 0 (662) LYS677 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 (736) ASP751 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 (739) TYR754 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 (868) PRO883 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (880) LYS895 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence msiyqefvnkyslsktlrfelipqgktlenikarglilddekrakdykkakqiidkyhqffieeilssvcisedllqnysdvyfklkksdddnlqkdfksakdtikkqiseyikdsekfknlfnqnlidakkgqesdlilwlkqskdngielfkansditdidealeiiksfkgwttyfKgfhENrkNvyssndiptsiiyrivddnlpkflenkakyeslkdkapeainyeqikkdlaeeltfdidyktsevnqrvfsldevfeianfnnylnqsgitkfntiiggkfvngentkrkgineyinlysqqindktlkkykmsvlfkqilsdtdkleddsdvvttmqsfyeqiaafktveeksiketlsllfddlkaqkldlskiyfkndksltdlsqqvfddysvigtavleyitqqiapknqeliakktekakylsletiklaleefnkhrdidkqcrfeeilanfaaipmifdeiaqnkdnlaqisikyqnqgkkdllqasaeddvkaikdlldqtnnllhklkifhisqsedkanildkdehfylvfeecyfelanivplynkirnyitqkpysdekfklnfenstlangwdknKepdntailfikddkyylgvmnkknnkifddkaikenkgegykkivykllPgaNKMlpKvffsaKsikfynpsedilrirnhsthtkngspqkgyekfefniedcrkfidfykqsiskhpewkdfgfrfsdtqrynsiDefYrevenqgykltfenisesyidsvvnqgklylfqiynkdfsayskgrpnlhtlywkalfdernlqdvvyklngeaelfyrkqsipkkithpakeaianknkdnpkkesvfeydlikdkrftedkfffhcPitinfkssganKfndeinlllkekandvhilsidrgerhlayytlvdgkgniikqdtfniigndrmktnyhdklaaiekdrdsarkdwkkinnikemkegylsqvvheiaklvieynaivvfqdlnfgfkrgrfkvekqvyqklekmlieklnylvfkdnefdktggvlrayqltapfetfkkmgkqtgiiyyvpagftskicpvtgfvnqlypkyesvsksqeffskfdkicynldkgyfefsfdyknfgdkaakgkwtiasfgsrlinfrnsnwdtrevyptkelekllkdysieyghgecikaaicgesdkkffakltsvlntilqmrnsktgteldylispvadvngnffdsrqapknmpqdadangayhiglkglmllgriknnqegkklnlvikneeyfefvqnrn >6gte_A: title=TRANSIENT STATE STRUCTURE OF CRISPR-CPF1 (CAS12A) I3 CONFORMATION organism=? DNA sequence DC(C-5):DG(D5) DT(C-4):DA(D4) DT(C-3):DA(D3) DC(C-2):DG(D2) DT(C-1):DA(D1) DC(C0):DG(D0) DT(C1):DA(D-1) DA(C2):DT(D-2) DA(C3):DT(D-3) DC(C4):DG(D-4) DG(C5):DC(D-5) DA(C6):DT(D-6) DG(C7):DC(D-7) DC(C8):DG(D-8) DT(C9):DA(D-9) DC(C10):DG(D-10) DG(C11):DC(D-11) chainA ( 12) SER14 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (175) THR177 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (182) GLU184 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (183) ASN185 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR197 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (604) LYS613 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 (607) ASP616 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (654) PRO663 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (657) ASN666 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 (658) LYS667 0 0 0 0 0 4 22 0 0 0 0 0 0 0 0 0 0 (659) MET668 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (662) LYS671 0 0 0 0 0 0 1 5 5 0 0 0 0 0 0 0 0 (668) LYS677 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (745) TYR754 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 (749) GLU758 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (816) ASN825 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (818) GLU827 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (885) ASN894 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iyqefvnkyslSktlrfelipqgktlenikarglilddekrakdykkakqiidkyhqffieeilssvcisedllqnysdvyfklkksdddnlqkdfksakdtikkqiseyikdsekfknlfnqnlidakkgqesdlilwlkqskdngielfkansditdidealeiiksfkgwtTyfkgfhENrknvyssndipTsiiyrivddnlpkflenkakyeslkdkapeainyeqikkdlaeeltfdidyktsevnqrvfsldevfeianfnnylnqsgitkfntiiggkfvngentkrkgineyinlysqqindktlkkykmsvlfkqilsdtekleddsdvvttmqsfyeqiaafktveeksiketlsllfddlkaqkldlskiyfkndksltdlsqqvfddysvigtavleyitqqiapknldnpskkeqeliakktekakylsletiklaleefnkhrdidkqcrfeeilanfaaipmifdeiaqnkdnlaqisikyqnqgkkdllqasaeddvkaikdlldqtnnllhklkifhisqsedkanildkdehfylvfeecyfelanivplynkirnyitqkpysdekfklnfenstlangwdknKepDntailfikddkyylgvmnkknnkifddkaikenkgegykkivykllPgaNKMlpKvffsaKsikfynpsedilrirnhsthtkngspqkgyekfefniedcrkfidfykqsiskhpewkdfgfrfsdtqrynsidefYrevEnqgykltfenisesyidsvvnqgklylfqiynkdfsayskgrpnlhtlywkalfdernlqdvvyklNgEaelfyrkqsipkkithpakeaianknkdnpkkesvfeydlikdkrftedkfffhcpitinfkssgaNkfndeinlllkekandvhilsidrgerhlayytlvdgkgniikqdtfniigndrmktnyhdklaaiekdrdsarkdwkkinnikemkegylsqvvheiaklvieynaivvfqdlnqvyqklekmlieklnylvfkdnefdktggvlrayqltapfetfkkmgkqtgiiyyvpagftskicpvtgfvnqlypkyesvsksqeffskfdkicynldkgyfefsfdyknfgdkaakgkwtiasfgsrlinfrnsnwdtrevyptkelekllkdysieyghgecikaaicgesdkkffakltsvlntilqmrnsktgteldylispvadvngnffdsrqapknmpqdadangayhiglkglmllgriknnqegkklnlvikneeyfefvqnrn >6gtf_A: title=TRANSIENT STATE STRUCTURE OF CRISPR-CPF1 (CAS12A) I5 CONFORMATION organism=FRANCISELLA TULARENSIS SUBSP. NOVICIDA U112 DNA sequence DT(C-4):DA(D4) DT(C-3):DA(D3) DC(C-2):DG(D2) DT(C-1):DA(D1) DC(C0):DG(D0) DT(C1):DA(D-1) DA(C2):DT(D-2) DA(C3):DT(D-3) DC(C4):DG(D-4) DG(C5):DC(D-5) DA(C6):DT(D-6) DG(C7):DC(D-7) DC(C8):DG(D-8) DT(C9):DA(D-9) DC(C10):DG(D-10) DG(C11):DC(D-11) chainA ( 12) SER14 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (175) THR177 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 (183) ASN185 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) PRO196 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) THR197 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (606) LYS613 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 (656) PRO663 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (659) ASN666 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 (660) LYS667 0 0 0 0 2 25 0 0 0 0 0 0 0 0 0 0 (661) MET668 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (664) LYS671 0 0 0 0 0 4 6 4 1 0 0 0 0 0 0 0 (670) LYS677 0 0 0 0 0 0 0 0 0 8 0 1 3 0 0 0 (743) ILE750 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (744) ASP751 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (747) TYR754 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 (751) GLU758 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (818) ASN825 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (887) ASN894 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iyqefvnkyslSktlrfelipqgktlenikarglilddekrakdykkakqiidkyhqffieeilssvcisedllqnysdvyfklkksdddnlqkdfksakdtikkqiseyikdsekfknlfnqnlidakkgqesdlilwlkqskdngielfkansditdidealeiiksfkgwtTyfkgfheNrknvyssndiPTsiiyrivddnlpkflenkakyeslkdkapeainyeqikkdlaeeltfdidyktsevnqrvfsldevfeianfnnylnqsgitkfntiiggkfvngentkrkgineyinlysqqindktlkkykmsvlfkqilsdteskkleddsdvvttmqsfyeqiaafktveeksiketlsllfddlkaqkldlskiyfkndksltdlsqqvfddysvigtavleyitqqiapknldnpskkeqeliakktekakylsletiklaleefnkhrdidkqcrfeeilanfaaipmifdeiaqnkdnlaqisikyqnqgkkdllqasaeddvkaikdlldqtnnllhklkifhisqsedkanildkdehfylvfeecyfelanivplynkirnyitqkpysdekfklnfenstlangwdknKepdntailfikddkyylgvmnkknnkifddkaikenkgegykkivykllPgaNKMlpKvffsaKsikfynpsedilrirnhsthtkngspqkgyekfefniedcrkfidfykqsiskhpewkdfgfrfsdtqrynsIDefYrevEnqgykltfenisesyidsvvnqgklylfqiynkdfsayskgrpnlhtlywkalfdernlqdvvyklNgeaelfyrkqsipkkithpakeaianknkdnpkkesvfeydlikdkrftedkfffhcpitinfkssgaNkfndeinlllkekandvhilsidrgerhlayytlvdgkgniikqdtfniigndrmktnyhdklaaiekdrdsarkdwkkinnikemkegylsqvvheiaklvieynaivvfqdlnvyqklekmlieklnylvfkdnefdktggvlrayqltapfetfkkmgkqtgiiyyvpagftskicpvtgfvnqlypkyesvsksqeffskfdkicynldkgyfefsfdyknfgdkaakgkwtiasfgsrlinfrnsdknhnwdtrevyptkelekllkdysieyghgecikaaicgesdkkffakltsvlntilqmrnsktgteldylispvadvngnffdsrqapknmpqdadangayhiglkglmllgriknnqegkklnlvikneeyfefvqnrnn >6gtg_A: title=TRANSITION STATE STRUCTURE OF CPF1(CAS12A) I4 CONFORMATION organism=FRANCISELLA TULARENSIS SUBSP. NOVICIDA U112 DNA sequence DT(C1):DA(D-1) DA(C2):DT(D-3) DC(C4):DG(D-4) DG(C5):DC(D-5) DA(C6):DT(D-6) DG(C7):DC(D-7) DC(C8):DG(D-8) DT(C9):DA(D-9) DC(C10):DG(D-10) chainA (175) THR177 0 2 0 0 0 0 0 0 0 (178) LYS180 0 1 0 0 0 0 0 0 0 (611) LYS613 0 5 1 0 0 0 0 0 0 (614) ASP616 0 0 0 4 0 0 0 0 0 (661) PRO663 2 0 0 0 0 0 0 0 0 (665) LYS667 24 0 0 0 0 0 0 0 0 (666) MET668 0 3 0 0 0 0 0 0 0 (669) LYS671 2 0 0 0 0 0 0 0 0 (675) LYS677 0 0 0 4 0 0 0 0 0 (825) GLU827 1 0 0 0 0 0 0 0 0 prot.sequence iyqefvnkyslsktlrfelipqgktlenikarglilddekrakdykkakqiidkyhqffieeilssvcisedllqnysdvyfklkksdddnlqkdfksakdtikkqiseyikdsekfknlfnqnlidakkgqesdlilwlkqskdngielfkansditdidealeiiksfkgwtTyfKgfhenrknvyssndiptsiiyrivddnlpkflenkakyeslkdkapeainyeqikkdlaeeltfdidyktsevnqrvfsldevfeianfnnylnqsgitkfntiiggkfvngentkrkgineyinlysqqindktlkkykmsvlfkqilsdtesksfvidkleddsdvvttmqsfyeqiaafktveeksiketlsllfddlkaqkldlskiyfkndksltdlsqqvfddysvigtavleyitqqiapknldnpskkeqeliakktekakylsletiklaleefnkhrdidkqcrfeeilanfaaipmifdeiaqnkdnlaqisikyqnqgkkdllqasaeddvkaikdlldqtnnllhklkifhisqsedkanildkdehfylvfeecyfelanivplynkirnyitqkpysdekfklnfenstlangwdknKepDntailfikddkyylgvmnkknnkifddkaikenkgegykkivykllPganKMlpKvffsaKsikfynpsedilrirnhsthtkngspqkgyekfefniedcrkfidfykqsiskhpewkdfgfrfsdtqrynsidefyrevenqgykltfenisesyidsvvnqgklylfqiynkdfsayskgrpnlhtlywkalfdernlqdvvyklngEaelfyrkqsipkkithpakeaianknkdnpkkesvfeydlikdkrftedkfffhcpitinfkssgankfndeinlllkekandvhilsidrgerhlayytlvdgkgniikqdtfniigndrmktnyhdklaaiekdrdsarkdwkkinnikemkegylsqvvheiaklvieynaivvfqdlnfgfkrgrfkvekqvyqklekmlieklnylvfkdnefdktggvlrayqltapfetfkkmgkqtgiiyyvpagftskicpvtgfvnqlypkyesvsksqeffskfdkicynldkgyfefsfdyknfgdkaakgkwtiasfgsrlinfrnsdknhnwdtrevyptkelekllkdysieyghgecikaaicgesdkkffakltsvlntilqmrnsktgteldylispvadvngnffdsrqapknmpqdadangayhiglkglmllgriknnqegkklnlvikneeyfefvqnrnn >6gts_BC:Ribbon-helix-helix; title=STRUCTURE OF THE ATAT-ATAR COMPLEX BOUND DNA organism=ESCHERICHIA COLI DNA sequence DA(D1) DT(D2) DG(D3) DT(D4) DA(D5) DC(D6) DG(D7) DG(D8) DT(D9) DA(D10) DA(D11) DT(D12) DA(D13) DT(D14) DC(D15) DC(D16) DG(D17) DT(D18) DA(D19) DC(D20) DA(D21) DT(D22) chainB ( 5) LYS6 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG8 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG12 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 4) ARG8 0 0 0 0 0 17 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ASP10 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence savkKqRidlRltdddksmieeaaaisnqsvsqfmlnsasqraaevieqhrrvilneeswtrvmdalsnpp/kkqRiDlrltdddksmieeaaaisnqsvsqfmlnsasqraaevieqhrrvilneeswtrvmdalsnppspgeklkraakrlqg >6gts_C:Ribbon-helix-helix; title=STRUCTURE OF THE ATAT-ATAR COMPLEX BOUND DNA organism=ESCHERICHIA COLI DNA sequence DA(D1) DT(D2) DG(D3) DT(D4) DA(D5) DC(D6) DG(D7) DG(D8) DT(D9) DA(D10) DA(D11) DT(D12) DA(D13) DT(D14) DC(D15) DC(D16) DG(D17) DT(D18) DA(D19) DC(D20) DA(D21) DT(D22) chainC ( 4) ARG8 0 0 0 0 0 17 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ASP10 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkqRiDlrltdddksmieeaaaisnqsvsqfmlnsasqraaevieqhrrvilneeswtrvmdalsnppspgeklkraakrlqg >6gy3_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF C. GLUTAMICUM AMTR BOUND TO GLNA OPERATOR DNA organism=Corynebacterium glutamicum DNA sequence DG(C1):DC(D18) DT(C2):DA(D17) DC(C3):DG(D16) DT(C4):DA(D15) DA(C5):DT(D14) DT(C6):DA(D13) DA(C7):DT(D12) DG(C8):DC(D11) DA(C9):DT(D10) DT(C10):DA(D9) DC(C11):DG(D8) DG(C12):DC(D7) DA(C13):DT(D6) DT(C14):DA(D5) DA(C15):DT(D4) DG(C16):DC(D3) DA(C17):DT(D2) DC(C18):DG(D1) chainA ( 24) THR42 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 34) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 35) GLN53 0 0 0 0 0 0 0 0 0 0 0 3 13 0 0 0 0 0 ( 36) ALA54 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 ( 37) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 ( 39) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 ( 40) TYR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 prot.sequence npreeildasaelftrqgfattsThqiadavgiRQASlYYhfpskteifltllkstvepstvlaedlstldagpemrlwaivasevrlllstkwnvgrlyqlpivgseefaeyhsqrealtnvfrdlateivgddpraelpfhitmsviemrrndgkipsplsadslpetaimladaslavlgaplpadrvektlelikqad >6gy3_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF C. GLUTAMICUM AMTR BOUND TO GLNA OPERATOR DNA organism=Corynebacterium glutamicum DNA sequence DG(D1):DC(C18) DT(D2):DA(C17) DC(D3):DG(C16) DT(D4):DA(C15) DA(D5):DT(C14) DT(D6):DA(C13) DC(D7):DG(C12) DG(D8):DC(C11) DA(D9):DT(C10) DT(D10):DA(C9) DC(D11):DG(C8) DT(D12):DA(C7) DA(D13):DT(C6) DT(D14):DA(C5) DA(D15):DT(C4) DG(D16):DC(C3) DA(D17):DT(C2) DC(D18):DG(C1) chainA ( 24) THR42 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG52 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN53 0 0 0 0 0 13 3 0 0 0 0 0 0 0 0 0 0 0 ( 36) ALA54 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) SER55 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR57 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR58 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 24) THR42 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 34) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 35) GLN53 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 ( 36) ALA54 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 ( 37) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 39) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 ( 40) TYR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 prot.sequence npreeildasaelftrqgfattsThqiadavgiRQASlYYhfpskteifltllkstvepstvlaedlstldagpemrlwaivasevrlllstkwnvgrlyqlpivgseefaeyhsqrealtnvfrdlateivgddpraelpfhitmsviemrrndgkipsplsadslpetaimladaslavlgaplpadrvektlelikqad/npreeildasaelftrqgfattsThqiadavgiRQASlYYhfpskteifltllkstvepstvlaedlstldagpemrlwaivasevrlllstkwnvgrlyqlpivgseefaeyhsqrealtnvfrdlateivgddpraelpfhitmsviemrrndgkipsplsadslpetaimladaslavlgaplpadrvektlelikqad >6gyk_MOU:Cyclin-like;Zinc_beta-ribbon;TATA-box_binding_protein-like;Rap30/74_interaction_domains;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain; title=STRUCTURE OF A YEAST CLOSED COMPLEX (CORE CC1) organism=? DNA sequence DT(N5):DA(T81) DG(N6):DC(T80) DC(N7):DG(T79) DC(N8):DG(T78) DC(N9):DG(T77) DG(N10):DC(T76) DG(N11):DC(T75) DC(N12):DG(T74) DC(N13):DG(T73) DC(N14):DG(T72) DA(N15):DT(T71) DG(N16):DC(T70) DC(N17):DG(T69) DC(N18):DG(T68) DA(N19):DT(T67) DC(N20):DG(T66) DA(N21):DT(T65) DT(N22):DA(T64) DA(N23):DT(T63) DT(N24):DA(T62) DA(N25):DT(T61) DT(N26):DA(T60) DA(N27):DT(T59) DT(N28):DA(T58) DA(N29):DT(T57) DG(N30):DC(T56) DG(N31):DC(T55) DT(N32):DA(T54) DG(N33):DC(T53) DT(N34):DA(T52) DG(N35):DC(T51) DT(N36):DA(T50) DG(N37):DC(T49) DC(N38):DG(T48) DC(N39):DG(T47) DA(N40):DT(T46) DC(N41):DG(T45) DT(N42):DA(T44) DC(N43):DG(T43) DC(N44):DG(T42) DC(N45):DG(T41) DG(N46):DC(T40) DG(N47):DC(T39) DC(N48):DG(T38) DC(N49):DG(T37) DA(N50):DT(T36) DC(N51):DG(T35) DG(N52):DC(T34) DG(N53):DC(T33) DT(N54):DA(T32) DA(N55):DT(T31) DT(N56):DA(T30) DT(N57):DA(T29) DA(N58):DT(T28) DG(N59):DC(T27) DC(N60):DG(T26) chainM chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU prot.sequence pnlnivltcpeckvyppkiverfsegdvvcalcglvlsdklvdtrsewrtfnplldgnnlstrigkgettdmrftkelnkaqgknvmdkkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktkefgktlnimknilrgksqnltyiprfcshlglpmqvttsaeytakkckeikeiagkspitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdp/sgivptlqNivatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmvvtgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFpgliyrmvkpkivlLiFvsgkivlTgakqreeiyqafeaiypvlsefrkm/snaeasrvYeiivesvvnevredfenagideqtlqdlkNiwqkkltenlmlclYdKvtrtkarwkcslkdgvvtinrndytfqkaqveaewv >6gyl_MOQRUW:Cyclin-like;Zinc_beta-ribbon;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain; title=STRUCTURE OF A YEAST CLOSED COMPLEX WITH DISTORTED DNA (CORE CCDIST) organism=? DNA sequence DG(N6):DC(T80) DC(N7):DG(T79) DC(N8):DG(T78) DC(N9):DG(T77) DG(N10):DC(T76) DG(N11):DC(T75) DC(N12):DG(T74) DC(N13):DG(T73) DC(N14):DG(T72) DA(N15):DT(T71) DG(N16):DC(T70) DC(N17):DG(T69) DC(N18):DG(T68) DA(N19):DT(T67) DC(N20):DG(T66) DT(N22):DA(T64) DA(N23):DA(T62) DT(N24):DT(T61) DT(N26):DA(T60) DA(N27):DA(T58) DA(N29):DT(T57) DG(N30):DC(T56) DG(N31):DC(T55) DT(N32):DA(T54) DG(N33):DC(T53) DT(N34):DA(T52) DG(N35):DC(T51) DT(N36):DA(T50) DG(N37):DC(T49) DC(N38):DG(T48) DC(N39):DG(T47) DA(N40):DT(T46) DC(N41):DG(T45) DT(N42):DA(T44) DC(N43):DG(T43) DC(N44):DG(T42) DC(N45):DG(T41) DG(N46):DC(T40) DG(N47):DC(T39) DC(N48):DG(T38) DC(N49):DG(T37) DC(N50):DG(T36) DC(N51):DG(T35) DG(N52):DC(T34) DG(N53):DC(T33) DT(N54):DA(T32) DA(N55):DT(T31) DT(N56):DA(T30) DT(N57):DA(T29) DA(N58):DT(T28) DG(N59):DC(T27) DC(N60):DG(T26) chainM chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR chainU chainW prot.sequence pnlnivltcpeckvyppkiverfsegdvvcalcglvlsdklvdtrsewrtfnplldgnnlstrigkgettdmrftkelnkaqgknvmdkkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktkefgktlnimknilrgksqnltyiprfcshlglpmqvttsaeytakkckeikeiagkspitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdp/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelfPgliyrmvkpkivlLifvsgkiVlTgakqreeiyqafeaiypvlsefrkm/fikrdrmrRnFlrmreynefplraipkedlenmrthllKfqskkkinpvtdfhLpVrlhrkRkTrqlkvldenakklrfeefypwvmedfyntwvgsyEaGnsdsyvllsveddgsftmipadkvykftaRnkyatltideaekRmdk/dldlersnRqVwlvrlpmflaekwrlgkirinkskitlLlnepheydleltkkVvEneyvfTeQtipkktaivgtvchecqvmpyhkiveqrrnivklNnKerittldetvgvtmshtgmsmrsdnsnflKvmpkkeildylfkLfdeydywSlKglkertrqpeahlkecldkvatlvkkgpyafkytl/snaeasrvYeIivesvvnevredfenagideqtlqdlkNiwqkkltenlmlclYdKvtrtkArWkcslkdgvvtinrndytfqkaqveaewv/piddivknLlKfvvrgfyggsfvlvldailfhsvlaedDlkqllsinktelgpLiArlrsdRlIsihkqreyppnsksvervyyyvkyphaidaikwkVhQvvqrlkddldknsepngymcpicltkytqLeavqllnfdrtefLcslcdepLvEddsgkknkekqdklnrlmdqiqpiidslkkiddsri >6gym_7MOQRW:Cyclin-like;Zinc_beta-ribbon;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURE OF A YEAST CLOSED COMPLEX WITH DISTORTED DNA (CCDIST) organism=? DNA sequence DT(T7):DA(N79) DT(T8):DA(N78) DT(T9):DA(N77) DT(T10):DA(N76) DA(T11):DT(N75) DT(T12):DA(N74) DG(T13):DC(N73) DT(T14):DA(N72) DA(T15):DT(N71) DT(T16):DA(N70) DG(T17):DC(N69) DT(T18):DA(N68) DA(T19):DT(N67) DC(T20):DG(N66) DA(T21):DT(N65) DA(T22):DT(N64) DC(T23):DG(N63) DA(T24):DT(N62) DC(T25):DG(N61) DA(T26):DT(N60) DC(T27):DG(N59) DA(T28):DT(N58) DT(T29):DA(N57) DC(T30):DG(N56) DA(T31):DC(N55) DA(T32):DC(N54) DA(T33):DT(N53) DG(T34):DC(N52) DG(T35):DC(N51) DT(T36):DA(N50) DG(T37):DC(N49) DA(T38):DT(N48) DT(T40):DT(N47) DC(T41):DG(N45) DG(T42):DC(N44) DA(T43):DT(N43) DA(T44):DT(N42) DC(T45):DG(N41) DG(T46):DC(N40) DT(T47):DA(N39) DT(T48):DA(N38) DC(T49):DG(N37) DC(T50):DG(N36) DA(T51):DT(N35) DT(T52):DA(N34) DA(T53):DT(N33) DG(T54):DC(N32) DC(T55):DG(N31) DT(T56):DA(N30) DA(T57):DT(N29) DT(T58):DA(N27) DA(T60):DT(N26) DT(T61):DT(N24) DT(T63):DA(N23) DA(T64):DT(N22) DC(T65):DG(N21) DA(T66):DT(N20) DC(T67):DG(N19) DA(T68):DT(N18) DG(T69):DC(N17) DC(T70):DG(N16) DG(T71):DC(N15) DT(T72):DA(N14) DG(T73):DC(N13) DC(T74):DG(N12) DT(T75):DA(N11) DA(T76):DT(N10) DC(T77):DG(N9) DT(T78):DA(N8) DG(T79):DC(N7) DT(T80):DA(N6) DT(T81):DA(N5) chain7 chainM chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR chainW prot.sequence rpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflxxxxxxxxxxxxxxxxxxxxxxxxxxlvvstysmvanxxxxxxxxxxxxxxxxxxxwgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeanwmelsqkghianvqcaevwcpmtaefyqeylretarkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpqqermnilqnfqyndqintiflskvgdtsidlpeatcliqisshygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmenipnlayasprerrellqevllkneea/pnlnivltcpeckvyppkiverfsegdvvcalcglvlsdklvdtrsewrtfnplldgnnlstrigkgettdmrftkelnkaqgknvmdkkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktkefgktlnimknilrgksqnltyiprfcshlglpmqvttsaeytakkckeikeiagkspitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdp/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLifasgkmvvTgakseddsklasrkyariiqkigfaakftdfkiqniVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkivlTgakqreeiyqafeaiypvlsefrkm/fikrdrmrRnFlrmreynefplraipkedlenmrthllKfqskkkinpvtdfhLpvrlhrkrkTrqlkvldenakklrfeefypwvmedfyntwvgsyeaGnsdsyvllsveddgsftmipadkvykftARnkyatltideaekRmDk/dldlersnRqVwlvrlpmflaekwrlgkirinkskitlLlnepheydleltkkVveneyvfteQtipkktaivgtvchecqvmpyhkiveqrrnivklnnKerittldetvgvtmshtgmsmrsdnsnfLKvmpkkeildylfkLfDeydywslKglkertrqpeahlkecldkvatlvkkgpyafkytl/piddivknLlKfvvrgfyggsfvlvldailfhsvlaedDlkqllsinktelgpLiarlrsdrlIsihkqreyppnsksvervyyyvkyphaidaikwkvhQvvqrlkddldknsepngymcpicltkytQLeavqllnfdrtefLcSlcdeplvEddsgkknkekqdklnrlmdqiqpiidslkkiddsrixxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxedefedvt >6gys_ACEHJL:Zn2/Cys6_DNA-binding_domain; title=CRYO-EM STRUCTURE OF THE CBF3-CEN3 COMPLEX OF THE BUDDING YEAST KINETOCHORE organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(F5):DA(G52) DT(F6):DA(G51) DA(F7):DT(G50) DA(F8):DT(G49) DA(F9):DT(G48) DA(F10):DT(G47) DT(F11):DA(G46) DA(F12):DT(G45) DT(F13):DA(G44) DT(F14):DA(G43) DA(F15):DT(G42) DG(F16):DC(G41) DT(F17):DA(G40) DG(F18):DC(G39) DT(F19):DA(G38) DA(F20):DT(G37) DT(F21):DA(G36) DT(F22):DA(G35) DT(F23):DA(G34) DG(F24):DC(G33) DA(F25):DT(G32) DT(F26):DA(G31) DT(F27):DA(G30) DT(F28):DA(G29) DC(F29):DG(G28) DC(F30):DG(G27) DG(F31):DC(G26) DA(F32):DT(G25) DA(F33):DT(G24) DA(F34):DT(G23) DG(F35):DC(G22) DT(F36):DA(G21) DT(F37):DA(G20) DA(F38):DT(G19) DA(F39):DT(G18) DA(F40):DT(G17) DA(F41):DT(G16) DA(F42):DT(G15) DA(F43):DT(G14) DG(F44):DC(G13) DA(F45):DT(G12) DA(F46):DT(G11) DA(F47):DT(G10) DT(F48):DA(G9) DA(F49):DT(G8) DG(F50):DC(G7) DT(F51):DA(G6) DA(F52):DT(G5) DA(F53):DT(G4) DG(F54):DC(G3) DA(F55):DT(G2) DA(F56):DT(G1) chainA chainC ( 16) LYS21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) GLN321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) HIS322 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TYR325 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (351) LYS368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (302) ARG334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 (304) GLU336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 chainH chainJ ( 12) LYS23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 21) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 25) ARG36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 chainL (302) ARG334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sfnpvrflelpidirkevyfhldgnfcgahpypidilyksndvelpskrskkllrymypvfatylnifeyspqliekwleyafwlrydclvldcfkvnhlydgtlidalewtyldnelrlayfnkasmlevwytfkeykkwvidsvafdeldllnvsniqfnidnltpqlvdkclsileqkdlfatigevqfgqdnqltsisvirtirsmesmkslrkitvrgeklyellinfhgfrdnpgktisyivkrrineirlsrmnqisrtgladftrwdnlqklvlsrvayidlnsivfpknfksltmkrvskikwwnieenilkelkvdkrtfkslyikeddskftkffnlrhtrikeldkseinqitylrcqaivwlsfrtlnhiklqnvsevfnniivpralfdskrveiyrcekisqvlvi/tqlkskhpcsvctrrKvkcdrmipcgncrkrgqdsecmkstitassskeylpdlllfwqnyeywitniglyktkqrdltrtpanldtdteecmfwmnylqkdqsfqlmnfamenlgalyfgsigdiselylrveqywdrradknhsvdgkywdaliwsvftmciyympveklaeifsvyplheylgsnkrlnwedgmqlvmcqnfarcslfqlkqcdfmahpdirlvqaylilatttfpydepllanslltqcihtfknfhvddfrpllnddpvesiakvtlgrifyrlcgcdylqsgprkpialhtevssllQHaaYlqdnstevlywkiisldrdldqylnksskpplKtldairreldifqykvdsleedfrsnnsrfqkfialfqistvswklfkmyliyydtadsllkvihyskviislivnnfhakseffnrhpmvmqtitrvvsfisfyqifvesaavkqllvdlteltanlptifgskldklvylterlsklkllwdkvqlldsgdsfyhpvfkilqndikiielkndemfslikglgslvplnsdfrtiveefqseynisdils/edrfqelvdslkprtahqyktyytkyiqwcqlnqiiptnsvpykdlpisaelihwflldtlitddkpgekreetedldeeeensfkiatlkkiigslnflsklckvhenpnanidtkylesvtklhthwidsqkaittnetnntntqvlcppllkvslnlwnpetnhlsekffktcseklrflvdfqlrsylnlsfeerskirfgslklgkrdrdaiiyhkvthsaekkdtpghhqllallpqdcpficpqttlaaylylrfygipsvskgdgfpnlnadengsllqdipilrgkslttypReEtfsnyyttvfrychlpykrreyfnkcnlvyptwdedtfrtffneenhgnwleqpeafafpdkipfdfkkimnfkspytsystnakkdpfpppkdllvqifpeideykrhdyeglsqnsrdfldlmevlrerflsnlpwiykffpnhdifqdpifgnsdfqsyfndktihskgspilsfdilpgfnkiyknktnfysllierp/sfnpvrflelpidirkevyfhldgnfcgahpypidilyksndvelpskrskkllrymypvfatylnifeyspqliekwleyafwlrydclvldcfkvnhlydgtlidalewtyldnelrlayfnkasmlevwytfkeykkwvidsvafdeldllnvsniqfnidnltpqlvdkclsileqkdlfatigevqfgqdnqltsisvirtirsmesmkslrkitvrgeklyellinfhgfrdnpgktisyivkrrineirlsrmnqisrtgladftrwdnlqklvlsrvayidlnsivfpknfksLtMkrvskikwwnieenilkelkvdkrtfkslyikeddskftkffnlrhtrikeldkseinqitylrcqaivwlsfrtlnhiklqnvsevfnniivpralfdskrveiyrcekisqvlvi/hpcsvctrrkvKcdrmipcgNcrkRgqdsecmkstitassskeylpdlllfwqnyeywitniglyktkqrdltrtpanldtdteecmfwmnylqkdqsfqlmnfamenlgalyfgsigdiselylrveqywdrradknhsvdgkywdaliwsvftmciyympveklaeifsvyplheylgsnkrlnwedgmqlvmcqnfarcslfqlkqcdfmahpdirlvqaylilatttfpydepllanslltqcihtfknfhvddfrpllnddpvesiakvtlgrifyrlcgcdylqsgprkpialhtenstevlywkiisldrdldqylnksskpplktldairreldifqykvdsleedfrsnnsrfqkfialfqistvswklfkmyliyydtadsllkvihyskviislivnnfhakseffnrhpmvmqtitrvvsfisfyqifvesaavkqllvdlteltanlptifgskldklvylterlsklkllwdkvqlldsgdsfyhpvfkilqndikiielkndemfslikglgslvplnsdfrtiveefqseynisdils/edrfqelvdslkprtahqyktyytkyiqwcqlnqiiptnsvpykdlpisaelihwflldtlitddkpgekreetedldeeeensfkiatlkkiigslnflsklckvhenpnanidtkylesvtklhthwidsqkaittnetnntntqvlcppllkvslnlwnpetnhlsekffktcseklrflvdfqlrsylnlsfeerskirfgslklgkrdrdaiiyhkvthsaekkdtpghhqllallpqdcpficpqttlaaylylrfygipsvskgdgfpnlnadengsllqdipilrgkslttypReetfsnyyttvfrychlpykrreyfnkcnlvyptwdedtfrtffneenhgnwleqpeafafpdkipfdfkkimnfkspytsystnakkdpfpppkdllvqifpeideykrhdyeglsqnsrdfldlmevlrerflsnlpwiykffpnhdifqdpifgnsdfqsyfndktihskgspilsfdilpgfnkiyknktnfysllierp >6gys_C:Zn2/Cys6_DNA-binding_domain; title=CRYO-EM STRUCTURE OF THE CBF3-CEN3 COMPLEX OF THE BUDDING YEAST KINETOCHORE organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(F5):DA(G52) DT(F6):DA(G51) DA(F7):DT(G50) DA(F8):DT(G49) DA(F9):DT(G48) DA(F10):DT(G47) DT(F11):DA(G46) DA(F12):DT(G45) DT(F13):DA(G44) DT(F14):DA(G43) DA(F15):DT(G42) DG(F16):DC(G41) DT(F17):DA(G40) DG(F18):DC(G39) DT(F19):DA(G38) DA(F20):DT(G37) DT(F21):DA(G36) DT(F22):DA(G35) DT(F23):DA(G34) DG(F24):DC(G33) DA(F25):DT(G32) DT(F26):DA(G31) DT(F27):DA(G30) DT(F28):DA(G29) DC(F29):DG(G28) DC(F30):DG(G27) DG(F31):DC(G26) DA(F32):DT(G25) DA(F33):DT(G24) DA(F34):DT(G23) DG(F35):DC(G22) DT(F36):DA(G21) DT(F37):DA(G20) DA(F38):DT(G19) DA(F39):DT(G18) DA(F40):DT(G17) DA(F41):DT(G16) DA(F42):DT(G15) DA(F43):DT(G14) DG(F44):DC(G13) DA(F45):DT(G12) DA(F46):DT(G11) DA(F47):DT(G10) DT(F48):DA(G9) DA(F49):DT(G8) DG(F50):DC(G7) DT(F51):DA(G6) DA(F52):DT(G5) DA(F53):DT(G4) DG(F54):DC(G3) DA(F55):DT(G2) DA(F56):DT(G1) chainC ( 16) LYS21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) GLN321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) HIS322 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TYR325 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (351) LYS368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tqlkskhpcsvctrrKvkcdrmipcgncrkrgqdsecmkstitassskeylpdlllfwqnyeywitniglyktkqrdltrtpanldtdteecmfwmnylqkdqsfqlmnfamenlgalyfgsigdiselylrveqywdrradknhsvdgkywdaliwsvftmciyympveklaeifsvyplheylgsnkrlnwedgmqlvmcqnfarcslfqlkqcdfmahpdirlvqaylilatttfpydepllanslltqcihtfknfhvddfrpllnddpvesiakvtlgrifyrlcgcdylqsgprkpialhtevssllQHaaYlqdnstevlywkiisldrdldqylnksskpplKtldairreldifqykvdsleedfrsnnsrfqkfialfqistvswklfkmyliyydtadsllkvihyskviislivnnfhakseffnrhpmvmqtitrvvsfisfyqifvesaavkqllvdlteltanlptifgskldklvylterlsklkllwdkvqlldsgdsfyhpvfkilqndikiielkndemfslikglgslvplnsdfrtiveefqseynisdils >6h0s_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE LACTOCOCCUS LACTIS FPG MUTANT G226P AND A FAPY-DG CONTAINING DNA organism=Lactococcus lactis subsp. cremoris DNA sequence DT(B2):DA(C28) DC(B3):DG(C27) DT(B4):DA(C26) DT(B5):DA(C25) DT(B6):DA(C24) FOX(B7):DC(C23) DT(B8):DA(C22) DT(B9):DA(C21) DT(B10):DA(C20) DC(B11):DG(C19) DT(B12):DA(C18) DC(B13):DG(C17) DG(B14):DC(C16) chainA ( 5) GLU5 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 74) ARG74 0 0 0 0 0 0 8 3 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 13 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 0 1 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 74 15 1 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 11 37 0 0 0 0 0 0 (172) ILE172 0 0 0 0 0 5 0 0 0 0 0 0 0 (173) TYR173 0 0 0 0 0 1 0 0 0 0 0 0 0 (217) SER217 0 0 0 0 0 1 0 0 0 0 0 0 0 (219) ILE219 0 0 0 0 0 9 0 0 0 0 0 0 0 (222) TYR222 0 0 0 0 0 2 0 0 0 0 0 0 0 (260) ARG260 0 0 0 0 0 0 5 1 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssirtysalpstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >6h1v_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE CRYSTAL STRUCTURE OF POL2CORE IN COMPLEX WITH DNA AND AN INCOMING NUCLEOTIDE, CARRYING AN FE-S CLUSTER organism=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) DNA sequence DA(T7):DT(P10) DA(T8):DT(P9) DC(T9):DG(P8) DG(T10):DC(P7) DC(T11):DG(P6) DG(T12):DC(P5) DG(T13):DC(P4) DT(T14):DA(P3) DT(T15):DA(P2) DA(T16):DT(P1) chainA (894) LYS967 4 4 0 0 0 0 0 0 0 0 (915) ARG988 0 0 4 9 0 0 0 0 0 0 prot.sequence alsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqenqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnannnvqrniynvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafaiattkpplkfpdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwvkrdsylpqgsqglkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgtgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasmypnimttnrlqpdsikaerdcktcarklkwawrgeffpskmdeynmikralqnetfpnkkvltfdelsyadqvihikkrlteysrkvyhrvkvseivereaivcqrenpfyvdtvksfrdrryefkglaktwkgnlskidpsdkhardeakkmivlydslqlahkvilnsfygyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKryavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenrsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrkiatk >6h3r_A:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF SMAD2 WITHOUT EXON -MH1 BOUND TO THE CAGAC SITE. organism=Homo sapiens DNA sequence DG(C1):DC(D18) DA(C2):DT(D17) DG(C3):DC(D16) DT(C4):DA(D15) DG(C5):DC(D14) DT(C6):DA(D13) DC(C7):DG(D12) DT(C8):DA(D11) DG(C9):DC(D10) DC(C10):DG(D9) DA(C11):DT(D8) DG(C12):DC(D7) DA(C13):DT(D6) DC(C14):DG(D5) DA(C15):DT(D4) DC(C16):DG(D3) DT(C17):DA(D2) DC(C18):DG(D1) chainA ( 65) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 2 10 16 0 0 0 ( 67) GLN86 0 0 0 0 0 0 0 0 0 4 8 2 0 0 0 0 0 0 ( 72) LYS91 0 0 0 0 0 0 0 0 0 0 4 7 7 0 0 0 0 0 prot.sequence sspvvkrllgwkksngqeekwsekavkslvkklkktgrldelekaittqnmntkcvtiprsldgRlQvshrKglphviycrlwrwpdlhshhelkaienceyafnlkkdevcvnpyhyqrv >6h67_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=YEAST RNA POLYMERASE I ELONGATION COMPLEX STALLED BY CYCLOBUTANE PYRIMIDINE DIMER (CPD) organism=? DNA sequence DG(U36):DC(T17) DG(U37):DC(T16) DA(U38):DT(T15) DG(U39):DC(T14) DA(U40):DT(T13) DA(U41):DT(T12) DG(U42):DC(T11) DG(U43):DC(T10) DA(U44):DT(T9) DG(U45):DC(T8) DC(U46):DG(T7) chainA (1401) ARG1600 0 1 0 0 0 0 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitlsstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpskvhensqnqllskvlttsllirdlnddlsklqkdkvsledrrvifsrlmnafvtiqndvnafidstkaqgrtsgkvpipgvkqalekkeglfrkhmmgkrvnyaarsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrqptlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavktsrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknsklfkssdgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfhfaanvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtersyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpn >6h67_AB: title=YEAST RNA POLYMERASE I ELONGATION COMPLEX STALLED BY CYCLOBUTANE PYRIMIDINE DIMER (CPD) organism=? DNA sequence DG(U36):DC(T17) DG(U37):DC(T16) DA(U38):DT(T15) DG(U39):DC(T14) DA(U40):DT(T13) DA(U41):DT(T12) DG(U42):DC(T11) DG(U43):DC(T10) DA(U44):DT(T9) DG(U45):DC(T8) DC(U46):DG(T7) chainA (1401) ARG1600 0 1 0 0 0 0 0 0 0 0 0 chainB prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitlsstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpskvhensqnqllskvlttsllirdlnddlsklqkdkvsledrrvifsrlmnafvtiqndvnafidstkaqgrtsgkvpipgvkqalekkeglfrkhmmgkrvnyaarsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrqptlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavktsrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknsklfkssdgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfhfaanvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtersyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpn/artadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkpgylgnklsvsveqvsiakpmsndgvssaverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgsffaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakklifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk >6h68_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=YEAST RNA POLYMERASE I ELONGATION COMPLEX STALLED BY CYCLOBUTANE PYRIMIDINE DIMER (CPD) WITH FULLY-ORDERED A49 organism=? DNA sequence DT(T6):DA(U47) DG(T7):DC(U46) DC(T8):DG(U45) DT(T9):DA(U44) DC(T10):DG(U43) DC(T11):DG(U42) DT(T12):DA(U41) DT(T13):DA(U40) DC(T14):DG(U39) DT(T15):DA(U38) DC(T16):DG(U37) DC(T17):DG(U36) DT(T19):DA(U35) DC(T20):DC(U34) DC(T21):DC(U23) DT(T22):DC(U22) DC(T23):DG(U21) DT(T24):DA(U20) DC(T25):DT(U19) DG(T26):DA(U18) DA(T27):DC(U17) DT(T28):DT(U16) DG(T29):DC(U15) DG(T30):DT(U14) chainA (302) HIS378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (517) PRO593 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (556) GLU632 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (937) THR1013 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 (938) SER1014 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (1410) ARG1600 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitlsstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgtyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevHensqnqllskvlttsllirdlnddlsklqkdkvsledrrvifsrlmnafvtiqndvnafidstkaqgrtsgkvpipgvkqalekkeglfrkhmmgkrvnyaarsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrqPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdEmnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknsklfkssdgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfhfanvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettaarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqknmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna >6h68_AB: title=YEAST RNA POLYMERASE I ELONGATION COMPLEX STALLED BY CYCLOBUTANE PYRIMIDINE DIMER (CPD) WITH FULLY-ORDERED A49 organism=? DNA sequence DT(T6):DA(U47) DG(T7):DC(U46) DC(T8):DG(U45) DT(T9):DA(U44) DC(T10):DG(U43) DC(T11):DG(U42) DT(T12):DA(U41) DT(T13):DA(U40) DC(T14):DG(U39) DT(T15):DA(U38) DC(T16):DG(U37) DC(T17):DG(U36) DT(T19):DA(U35) DC(T20):DC(U34) DC(T21):DC(U23) DT(T22):DC(U22) DC(T23):DG(U21) DT(T24):DA(U20) DC(T25):DT(U19) DG(T26):DA(U18) DA(T27):DC(U17) DT(T28):DT(U16) DG(T29):DC(U15) DG(T30):DT(U14) chainA (302) HIS378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (517) PRO593 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (556) GLU632 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (937) THR1013 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 (938) SER1014 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (1410) ARG1600 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (436) MET451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (493) PHE508 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (497) LEU512 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitlsstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgtyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevHensqnqllskvlttsllirdlnddlsklqkdkvsledrrvifsrlmnafvtiqndvnafidstkaqgrtsgkvpipgvkqalekkeglfrkhmmgkrvnyaarsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrqPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdEmnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknsklfkssdgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfhfanvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettaarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqknmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/artadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsnsgylgnklsvsveqvsiakpmsndgvssaverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlMrvnenigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgsFfaqLktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalngdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakklfiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk >6h8q_A:ARM_repeat; title=STRUCTURAL BASIS FOR SCC3-DEPENDENT COHESIN RECRUITMENT TO CHROMATIN organism=? DNA sequence DT(E1):DA(F19) DT(E2):DA(F18) DT(E3):DA(F17) DT(E4):DA(F16) DC(E5):DG(F15) DA(E6):DT(F14) DA(E7):DT(F13) DG(E8):DC(F12) DG(E9):DC(F11) DA(E10):DT(F10) DA(E11):DT(F9) DA(E12):DT(F8) DC(E13):DG(F7) DG(E14):DC(F6) DA(E15):DT(F5) DA(E16):DT(F4) DA(E17):DT(F3) DC(E18):DG(F2) DG(E19):DC(F1) chainA ( 91) LYS225 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence telfdilstsedvsieellrewletysenrdkflqefinlllnccgsvarvedhdvhsnessnetigeiqllfqrqklhefylliskenkKrknfkmgplyqnfaefmtkllevandlqllyvgnlvldlltwlssfsvckircfryistltlylfqdyltqqavnleknylaklskqlsleekkkrpnnktleklestiaetqgskvvidsiidnivklcfvhrykdvsdlirsesmlhlsiwiknypeyflkvtflkyfgwllsdnsvsvrlqvtkilphliiqnsairqvferfktkilevairdvnldvrihsiqvlteasslgylddseiliisslmfdeefdpfktssfnkrskflstvakflarvikekfdefikthedlpkevdglevgpvvqvgifikilndsliyhlkdcaevdsrtkirmltqaaeflspyisthlkticnllisdtesnelipidrnstilylnvfhglcagannpkiqtkdsvkeivlplfydllnaasiesadilcpllesfitfslddwisigyetelkkitdktikafmdstignskvdmkydifakfihhihhfekkelqekflnqiatlkihlkkflqekmdpnnsrddykdltcslyelyinkltilgrdypievdeellqlflnnfvsripimfqdfddstaqeinfkmlvllatwnlekwreiiekvrdyeiskdlrsvwkpiaaiigrlntlvislaatnetfeninslfylkwsactslmdiivaikifelklpadattwrysmseqfpfylhdnaskvllkiflyleslfakqvdvqlervadedanlndlpetgffenietefllftvklkglmklnilderfasrvalnkeklgplfkkivdd >6hko_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=YEAST RNA POLYMERASE I ELONGATION COMPLEX BOUND TO NUCLEOTIDE ANALOG GMPCPP organism=? DNA sequence DG(S1):DC(T38) DG(S2):DC(T37) DC(S3):DG(T36) DA(S4):DT(T35) DG(S5):DC(T34) DT(S6):DA(T33) DA(S7):DT(T32) DC(S8):DG(T31) DT(S9):DA(T30) DA(S10):DT(T29) DG(S11):DC(T28) DT(S12):DA(T27) DA(S13):DT(T26) DA(S14):DT(T25) DA(S15):DA(T24) DG(S24):DC(T23) DA(S25):DT(T22) DA(S26):DG(T21) DA(S27):DG(T20) DG(S28):DT(T19) DT(S29):DC(T18) DA(S30):DC(T17) DC(S31):DG(T16) DT(S32):DC(T15) DT(S33):DA(T14) DG(S34):DT(T13) DA(S35):DT(T12) DC(S36):DC(T11) chainA (299) LEU373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) GLU376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (507) GLN592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (508) PRO593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (928) THR1013 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 (929) SER1014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (1395) ARG1600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitdisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpskLgeEvhensqnqllskvlttsllirdlnddlsklledrrvifsrlmnafvtiqndvnafidstkaqgvpipgvkqalekkeglfrkhmmgkrvnyaaRsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettgarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna >6hko_AB: title=YEAST RNA POLYMERASE I ELONGATION COMPLEX BOUND TO NUCLEOTIDE ANALOG GMPCPP organism=? DNA sequence DC(T11):DC(S36) DT(T12):DA(S35) DT(T13):DG(S34) DA(T14):DT(S33) DC(T15):DT(S32) DG(T16):DC(S31) DC(T17):DA(S30) DC(T18):DT(S29) DT(T19):DG(S28) DG(T20):DA(S27) DG(T21):DA(S26) DT(T22):DA(S25) DC(T23):DG(S24) DA(T24):DA(S15) DT(T25):DA(S14) DT(T26):DA(S13) DA(T27):DT(S12) DC(T28):DG(S11) DT(T29):DA(S10) DA(T30):DT(S9) DG(T31):DC(S8) DT(T32):DA(S7) DA(T33):DT(S6) DC(T34):DG(S5) DT(T35):DA(S4) DG(T36):DC(S3) DC(T37):DG(S2) DC(T38):DG(S1) chainA (299) LEU373 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) GLU376 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ARG481 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) GLN592 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (508) PRO593 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (928) THR1013 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (929) SER1014 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1395) ARG1600 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (195) ARG219 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) PRO394 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) ASP395 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (455) GLN479 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (481) ARG505 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (484) PHE508 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (485) PHE509 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitdisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpskLgeEvhensqnqllskvlttsllirdlnddlsklledrrvifsrlmnafvtiqndvnafidstkaqgvpipgvkqalekkeglfrkhmmgkrvnyaaRsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettgarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/artadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkpgylgnklsvsveqvsiakpmsndaverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiiRpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnPDatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlQqvsgytvvaekinfyrfishfrmvhRgsFFaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk >6hkt_w:Histone-fold; title=STRUCTURE OF AN H1-BOUND 6-NUCLEOSOME ARRAY organism=? DNA sequence DA(J1):DT(I1122) DT(J2):DA(I1121) DC(J3):DG(I1120) DG(J4):DC(I1119) DC(J5):DG(I1118) DT(J6):DA(I1117) DG(J7):DC(I1116) DT(J8):DA(I1115) DT(J9):DA(I1114) DC(J10):DG(I1113) DA(J11):DT(I1112) DA(J12):DT(I1111) DT(J13):DA(I1110) DA(J14):DT(I1109) DC(J15):DG(I1108) DA(J16):DT(I1107) DT(J17):DA(I1106) DG(J18):DC(I1105) DC(J19):DG(I1104) DA(J20):DT(I1103) DC(J21):DG(I1102) DA(J22):DT(I1101) DG(J23):DC(I1100) DG(J24):DC(I1099) DA(J25):DT(I1098) DT(J26):DA(I1097) DG(J27):DC(I1096) DT(J28):DA(I1095) DA(J29):DT(I1094) DT(J30):DA(I1093) DA(J31):DT(I1092) DT(J32):DA(I1091) DA(J33):DT(I1090) DT(J34):DA(I1089) DC(J35):DG(I1088) DT(J36):DA(I1087) DG(J37):DC(I1086) DA(J38):DT(I1085) DC(J39):DG(I1084) DA(J40):DT(I1083) DC(J41):DG(I1082) DG(J42):DC(I1081) DT(J43):DA(I1080) DG(J44):DC(I1079) DC(J45):DG(I1078) DC(J46):DG(I1077) DT(J47):DA(I1076) DG(J48):DC(I1075) DG(J49):DC(I1074) DA(J50):DT(I1073) DG(J51):DC(I1072) DA(J52):DT(I1071) DC(J53):DG(I1070) DT(J54):DA(I1069) DA(J55):DT(I1068) DG(J56):DC(I1067) DG(J57):DC(I1066) DG(J58):DC(I1065) DA(J59):DT(I1064) DG(J60):DC(I1063) DT(J61):DA(I1062) DA(J62):DT(I1061) DA(J63):DT(I1060) DT(J64):DA(I1059) DC(J65):DG(I1058) DC(J67):DG(I1056) DC(J68):DG(I1055) DT(J69):DA(I1054) DT(J70):DA(I1053) DG(J71):DC(I1052) DG(J72):DC(I1051) DC(J73):DG(I1050) DG(J74):DC(I1049) DG(J75):DC(I1048) DT(J76):DA(I1047) DT(J77):DA(I1046) DA(J78):DT(I1045) DA(J79):DT(I1044) DA(J80):DT(I1043) DA(J81):DT(I1042) DC(J82):DG(I1041) DC(J84):DC(I1040) DG(J85):DC(I1038) DG(J86):DC(I1037) DG(J87):DC(I1036) DG(J88):DC(I1035) DG(J89):DC(I1034) DA(J90):DT(I1033) DC(J91):DG(I1032) DA(J92):DT(I1031) DG(J93):DC(I1030) DC(J94):DG(I1029) DG(J95):DC(I1028) DC(J96):DG(I1027) DG(J97):DC(I1026) DT(J98):DA(I1025) DA(J99):DT(I1024) DC(J100):DG(I1023) DG(J101):DC(I1022) DT(J102):DA(I1021) DG(J103):DC(I1020) DC(J104):DG(I1019) DG(J105):DC(I1018) DT(J106):DA(I1017) DT(J107):DA(I1016) DT(J108):DA(I1015) DA(J109):DT(I1014) DA(J110):DT(I1013) DG(J111):DC(I1012) DC(J112):DG(I1011) DG(J113):DC(I1010) DG(J114):DC(I1009) DT(J115):DA(I1008) DG(J116):DC(I1007) DC(J117):DG(I1006) DT(J118):DA(I1005) DA(J119):DT(I1004) DG(J120):DC(I1003) DA(J121):DT(I1002) DG(J122):DC(I1001) DC(J123):DG(I1000) DT(J124):DA(I999) DG(J125):DC(I998) DT(J126):DA(I997) DC(J127):DG(I996) DT(J128):DA(I995) DA(J129):DT(I994) DC(J130):DG(I993) DG(J131):DC(I992) DA(J132):DT(I991) DC(J133):DG(I990) DC(J134):DG(I989) DA(J135):DT(I988) DA(J136):DT(I987) DT(J137):DA(I986) DT(J138):DA(I985) DG(J139):DC(I984) DA(J140):DT(I983) DG(J141):DC(I982) DC(J142):DG(I981) DG(J143):DC(I980) DG(J144):DC(I979) DC(J145):DG(I978) DC(J146):DG(I977) DT(J147):DA(I976) DC(J148):DG(I975) DG(J149):DC(I974) DG(J150):DC(I973) DC(J151):DG(I972) DA(J152):DT(I971) DC(J153):DG(I970) DC(J154):DG(I969) DG(J155):DC(I968) DG(J156):DC(I967) DG(J157):DC(I966) DA(J158):DT(I965) DT(J159):DA(I964) DT(J160):DA(I963) DC(J161):DG(I962) DT(J162):DA(I961) DC(J163):DG(I960) DC(J164):DG(I959) DA(J165):DT(I958) 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DG(J717):DC(I406) DG(J718):DC(I405) DA(J719):DT(I404) DT(J720):DA(I403) DT(J721):DA(I402) DC(J722):DG(I401) DT(J723):DA(I400) DC(J724):DG(I399) DC(J725):DG(I398) DA(J726):DT(I397) DG(J727):DC(I396) DG(J728):DC(I395) DG(J729):DC(I394) DC(J730):DG(I393) DG(J731):DC(I392) DG(J732):DC(I391) DC(J733):DG(I390) DC(J734):DG(I389) DG(J735):DC(I388) DC(J736):DG(I387) DG(J737):DC(I386) DT(J738):DA(I385) DA(J739):DT(I384) DT(J740):DA(I383) DA(J741):DT(I382) DG(J742):DC(I381) DG(J743):DC(I380) DG(J744):DC(I379) DT(J745):DA(I378) DC(J746):DG(I377) DT(J747):DA(I376) DC(J748):DG(I375) DG(J749):DC(I374) DG(J750):DC(I373) DG(J751):DC(I372) DG(J752):DC(I371) DC(J753):DG(I370) DT(J754):DA(I369) DG(J755):DC(I368) DT(J756):DA(I367) DT(J757):DA(I366) DC(J758):DG(I365) DA(J759):DT(I364) DA(J760):DT(I363) DT(J761):DA(I362) DA(J762):DT(I361) DC(J763):DG(I360) DA(J764):DT(I359) DT(J765):DA(I358) DG(J766):DC(I357) DC(J767):DG(I356) DA(J768):DT(I355) DC(J769):DG(I354) DA(J770):DT(I353) DG(J771):DC(I352) DG(J772):DC(I351) DA(J773):DT(I350) DT(J774):DA(I349) DG(J775):DC(I348) DT(J776):DA(I347) DA(J777):DT(I346) DT(J778):DA(I345) DA(J779):DT(I344) DT(J780):DA(I343) DA(J781):DT(I342) DT(J782):DA(I341) DC(J783):DG(I340) DT(J784):DA(I339) DG(J785):DC(I338) DA(J786):DT(I337) DC(J787):DG(I336) DA(J788):DT(I335) DC(J789):DG(I334) DG(J790):DC(I333) DT(J791):DA(I332) DG(J792):DC(I331) DC(J793):DG(I330) DC(J794):DG(I329) DT(J795):DA(I328) DG(J796):DC(I327) DG(J797):DC(I326) DA(J798):DT(I325) DG(J799):DC(I324) DA(J800):DT(I323) DC(J801):DG(I322) DT(J802):DA(I321) DA(J803):DT(I320) DG(J804):DC(I319) DG(J805):DC(I318) DG(J806):DC(I317) DA(J807):DT(I316) DG(J808):DC(I315) DT(J809):DA(I314) DA(J810):DT(I313) DA(J811):DT(I312) DT(J812):DA(I311) DC(J813):DG(I310) DC(J815):DG(I308) DC(J816):DG(I307) DT(J817):DA(I306) DT(J818):DA(I305) DG(J819):DC(I304) DG(J820):DC(I303) DC(J821):DG(I302) DG(J822):DC(I301) DG(J823):DC(I300) DT(J824):DA(I299) DT(J825):DA(I298) DA(J826):DT(I297) DA(J827):DT(I296) DA(J828):DT(I295) DA(J829):DT(I294) DC(J830):DG(I293) DC(J832):DC(I292) DG(J833):DC(I290) DG(J834):DC(I289) DG(J835):DC(I288) DG(J836):DC(I287) DG(J837):DC(I286) DA(J838):DT(I285) DC(J839):DG(I284) DA(J840):DT(I283) DG(J841):DC(I282) DC(J842):DG(I281) DG(J843):DC(I280) DC(J844):DG(I279) DG(J845):DC(I278) DT(J846):DA(I277) DA(J847):DT(I276) DC(J848):DG(I275) DG(J849):DC(I274) DT(J850):DA(I273) DG(J851):DC(I272) DC(J852):DG(I271) DG(J853):DC(I270) DT(J854):DA(I269) DT(J855):DA(I268) DT(J856):DA(I267) DA(J857):DT(I266) DA(J858):DT(I265) DG(J859):DC(I264) DC(J860):DG(I263) DG(J861):DC(I262) DG(J862):DC(I261) DT(J863):DA(I260) DG(J864):DC(I259) DC(J865):DG(I258) DT(J866):DA(I257) DA(J867):DT(I256) DG(J868):DC(I255) DA(J869):DT(I254) DG(J870):DC(I253) DC(J871):DG(I252) DT(J872):DA(I251) DG(J873):DC(I250) DT(J874):DA(I249) DC(J875):DG(I248) DT(J876):DA(I247) DA(J877):DT(I246) DC(J878):DG(I245) DG(J879):DC(I244) DA(J880):DT(I243) DC(J881):DG(I242) DC(J882):DG(I241) DA(J883):DT(I240) DA(J884):DT(I239) DT(J885):DA(I238) DT(J886):DA(I237) DG(J887):DC(I236) DA(J888):DT(I235) DG(J889):DC(I234) DC(J890):DG(I233) DG(J891):DC(I232) DG(J892):DC(I231) DC(J893):DG(I230) DC(J894):DG(I229) DT(J895):DA(I228) DC(J896):DG(I227) DG(J897):DC(I226) DG(J898):DC(I225) DC(J899):DG(I224) DA(J900):DT(I223) DC(J901):DG(I222) DC(J902):DG(I221) DG(J903):DC(I220) DG(J904):DC(I219) DG(J905):DC(I218) DA(J906):DT(I217) DT(J907):DA(I216) DT(J908):DA(I215) DC(J909):DG(I214) DT(J910):DA(I213) DC(J911):DG(I212) DC(J912):DG(I211) DA(J913):DT(I210) DG(J914):DC(I209) DG(J915):DC(I208) DG(J916):DC(I207) DC(J917):DG(I206) DG(J918):DC(I205) DG(J919):DC(I204) DC(J920):DG(I203) DC(J921):DG(I202) DG(J922):DC(I201) DC(J923):DG(I200) DG(J924):DC(I199) DT(J925):DA(I198) DA(J926):DT(I197) DT(J927):DA(I196) DA(J928):DT(I195) DG(J929):DC(I194) DG(J930):DC(I193) DG(J931):DC(I192) DT(J932):DA(I191) DC(J933):DG(I190) DT(J934):DA(I189) DC(J935):DG(I188) DG(J936):DC(I187) DG(J937):DC(I186) DG(J938):DC(I185) DC(J940):DG(I183) DT(J941):DA(I182) DG(J942):DC(I181) DT(J943):DA(I180) DT(J944):DA(I179) DC(J945):DG(I178) DA(J946):DT(I177) DT(J948):DA(I175) DA(J949):DT(I174) DC(J950):DG(I173) DA(J951):DT(I172) DT(J952):DA(I171) DG(J953):DC(I170) DC(J954):DG(I169) DA(J955):DT(I168) DC(J956):DG(I167) DA(J957):DT(I166) DG(J958):DC(I165) DG(J959):DC(I164) DA(J960):DT(I163) DT(J961):DA(I162) DG(J962):DC(I161) DT(J963):DA(I160) DA(J964):DT(I159) DT(J965):DA(I158) DA(J966):DT(I157) DT(J967):DA(I156) DA(J968):DT(I155) DT(J969):DA(I154) DC(J970):DG(I153) DT(J971):DA(I152) DG(J972):DC(I151) DA(J973):DT(I150) DC(J974):DG(I149) DA(J975):DT(I148) DC(J976):DG(I147) DG(J977):DC(I146) DT(J978):DA(I145) DG(J979):DC(I144) DC(J980):DG(I143) DC(J981):DG(I142) DT(J982):DA(I141) DG(J983):DC(I140) DG(J984):DC(I139) DA(J985):DT(I138) DG(J986):DC(I137) DA(J987):DT(I136) DC(J988):DG(I135) DT(J989):DA(I134) DA(J990):DT(I133) DG(J991):DC(I132) DG(J992):DC(I131) DG(J993):DC(I130) DA(J994):DT(I129) DG(J995):DC(I128) DT(J996):DA(I127) DA(J997):DT(I126) DA(J998):DT(I125) DT(J999):DA(I124) DC(J1000):DG(I123) DC(J1001):DG(I122) DC(J1002):DG(I121) DC(J1003):DG(I120) DT(J1004):DA(I119) DT(J1005):DA(I118) DG(J1006):DC(I117) DG(J1007):DC(I116) DC(J1008):DG(I115) DG(J1009):DC(I114) DG(J1010):DC(I113) DT(J1011):DA(I112) DT(J1012):DA(I111) DA(J1013):DT(I110) DA(J1014):DT(I109) DA(J1015):DT(I108) DA(J1016):DT(I107) DC(J1017):DG(I106) DG(J1018):DC(I105) DC(J1019):DG(I104) DG(J1020):DC(I103) DG(J1021):DC(I102) DG(J1022):DC(I101) DG(J1023):DC(I100) DG(J1024):DC(I99) DA(J1025):DT(I98) DC(J1026):DG(I97) DA(J1027):DT(I96) DG(J1028):DC(I95) DC(J1029):DG(I94) DG(J1030):DC(I93) DC(J1031):DG(I92) DG(J1032):DC(I91) DT(J1033):DA(I90) DA(J1034):DT(I89) DC(J1035):DG(I88) DG(J1036):DC(I87) DT(J1037):DA(I86) DG(J1038):DC(I85) DC(J1039):DG(I84) DG(J1040):DC(I83) DT(J1041):DA(I82) DT(J1042):DA(I81) DT(J1043):DA(I80) DA(J1044):DT(I79) DA(J1045):DT(I78) DG(J1046):DC(I77) DC(J1047):DG(I76) DG(J1048):DC(I75) DG(J1049):DC(I74) DT(J1050):DA(I73) DG(J1051):DC(I72) DC(J1052):DG(I71) DT(J1053):DA(I70) DA(J1054):DT(I69) DG(J1055):DC(I68) DA(J1056):DT(I67) DG(J1057):DC(I66) DC(J1058):DG(I65) DT(J1059):DA(I64) DG(J1060):DC(I63) DT(J1061):DA(I62) DC(J1062):DG(I61) DT(J1063):DA(I60) DA(J1064):DT(I59) DC(J1065):DG(I58) DG(J1066):DC(I57) DA(J1067):DT(I56) DC(J1068):DG(I55) DC(J1069):DG(I54) DA(J1070):DT(I53) DA(J1071):DT(I52) DT(J1072):DA(I51) DT(J1073):DA(I50) DG(J1074):DC(I49) DA(J1075):DT(I48) DG(J1076):DC(I47) DC(J1077):DG(I46) DG(J1078):DC(I45) DG(J1079):DC(I44) DC(J1080):DG(I43) DC(J1081):DG(I42) DT(J1082):DA(I41) DC(J1083):DG(I40) DG(J1084):DC(I39) DG(J1085):DC(I38) DC(J1086):DG(I37) DA(J1087):DT(I36) DC(J1088):DG(I35) DC(J1089):DG(I34) DG(J1090):DC(I33) DG(J1091):DC(I32) DG(J1092):DC(I31) DA(J1093):DT(I30) DT(J1094):DA(I29) DT(J1095):DA(I28) DC(J1096):DG(I27) DT(J1097):DA(I26) DC(J1098):DG(I25) DC(J1099):DG(I24) DA(J1100):DT(I23) DG(J1101):DC(I22) DG(J1102):DC(I21) DG(J1103):DC(I20) DC(J1104):DG(I19) DG(J1105):DC(I18) DG(J1106):DC(I17) DC(J1107):DG(I16) DC(J1108):DG(I15) DG(J1109):DC(I14) DC(J1110):DG(I13) DG(J1111):DC(I12) DT(J1112):DA(I11) DA(J1113):DT(I10) DT(J1114):DA(I9) DA(J1115):DT(I8) DG(J1116):DC(I7) DG(J1117):DC(I6) DG(J1118):DC(I5) DT(J1119):DA(I4) DG(J1120):DC(I3) DA(J1121):DT(I2) DT(J1122):DA(I1) chainw ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >6hlq_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=YEAST RNA POLYMERASE I* ELONGATION COMPLEX BOUND TO NUCLEOTIDE ANALOG GMPCPP organism=? DNA sequence DG(S1):DC(T38) DG(S2):DC(T37) DC(S3):DG(T36) DA(S4):DT(T35) DG(S5):DC(T34) DT(S6):DA(T33) DA(S7):DT(T32) DC(S8):DG(T31) DT(S9):DA(T30) DA(S10):DT(T29) DG(S11):DC(T28) DT(S12):DA(T27) DA(S13):DT(T26) DA(S14):DT(T25) DA(S15):DA(T24) DG(S24):DC(T23) DA(S25):DT(T22) DA(S26):DG(T21) DA(S27):DG(T20) DG(S28):DT(T19) DT(S29):DC(T18) DA(S30):DC(T17) DC(S31):DG(T16) DT(S32):DC(T15) DT(S33):DA(T14) DG(S34):DT(T13) DA(S35):DT(T12) DC(S36):DC(T11) chainA (299) LEU373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) GLU376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (507) GLN592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (508) PRO593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (928) THR1013 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (929) SER1014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (1393) ARG1600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitdisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpskLgeEvhensqnqllskvlttsllirdlnddlsklledrrvifsrlmnafvtiqndvnafidstkaqgvpipgvkqalekkeglfrkhmmgkrvnyaaRsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettgarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna >6hlq_AB: title=YEAST RNA POLYMERASE I* ELONGATION COMPLEX BOUND TO NUCLEOTIDE ANALOG GMPCPP organism=? DNA sequence DG(S1):DC(T38) DG(S2):DC(T37) DC(S3):DG(T36) DA(S4):DT(T35) DG(S5):DC(T34) DT(S6):DA(T33) DA(S7):DT(T32) DC(S8):DG(T31) DT(S9):DA(T30) DA(S10):DT(T29) DG(S11):DC(T28) DT(S12):DA(T27) DA(S13):DT(T26) DA(S14):DT(T25) DA(S15):DA(T24) DG(S24):DC(T23) DA(S25):DT(T22) DA(S26):DG(T21) DA(S27):DG(T20) DG(S28):DT(T19) DT(S29):DC(T18) DA(S30):DC(T17) DC(S31):DG(T16) DT(S32):DC(T15) DT(S33):DA(T14) DG(S34):DT(T13) DA(S35):DT(T12) DC(S36):DC(T11) chainA (299) LEU373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) GLU376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (507) GLN592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (508) PRO593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (928) THR1013 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (929) SER1014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (1393) ARG1600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 chainB (196) ARG219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 (371) PRO394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (372) ASP395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (456) GLN479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (482) ARG505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (485) PHE508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (486) PHE509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (490) LYS513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (1038) LYS1061 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitdisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpskLgeEvhensqnqllskvlttsllirdlnddlsklledrrvifsrlmnafvtiqndvnafidstkaqgvpipgvkqalekkeglfrkhmmgkrvnyaaRsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettgarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/qartadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkpgylgnklsvsveqvsiakpmsndaverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiiRpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnPDatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlQqvsgytvvaekinfyrfishfrmvhRgsFFaqlKtttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvKgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk >6hlr_AB: title=YEAST RNA POLYMERASE I ELONGATION COMPLEX BOUND TO NUCLEOTIDE ANALOG GMPCPP (CORE FOCUSED) organism=? DNA sequence DC(T11):DC(S36) DT(T12):DA(S35) DT(T13):DG(S34) DA(T14):DT(S33) DC(T15):DT(S32) DG(T16):DC(S31) DC(T17):DA(S30) DC(T18):DT(S29) DT(T19):DG(S28) DG(T20):DA(S27) DG(T21):DA(S26) DT(T22):DA(S25) DC(T23):DG(S24) DA(T24):DA(S15) DT(T25):DA(S14) DT(T26):DA(S13) DA(T27):DT(S12) DC(T28):DG(S11) DT(T29):DA(S10) DA(T30):DT(S9) DG(T31):DC(S8) DT(T32):DA(S7) DA(T33):DT(S6) DC(T34):DG(S5) DT(T35):DA(S4) DG(T36):DC(S3) DC(T37):DG(S2) DC(T38):DG(S1) chainA (299) LEU373 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) GLU376 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ARG481 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) GLN592 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (508) PRO593 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (928) THR1013 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (929) SER1014 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1395) ARG1600 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (193) ARG219 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) PRO394 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ASP395 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (453) GLN479 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (479) ARG505 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) PHE508 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (483) PHE509 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1035) LYS1061 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitdisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpskLgeEvhensqnqllskvlttsllirdlnddlsklledrrvifsrlmnafvtiqndvnafidstkaqgvpipgvkqalekkeglfrkhmmgkrvnyaaRsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettgarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/tadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkpgylgnklsvsveqvsiakpmsndaverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiiRpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnPDatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlQqvsgytvvaekinfyrfishfrmvhRgsFFaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvKgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk >6hlr_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=YEAST RNA POLYMERASE I ELONGATION COMPLEX BOUND TO NUCLEOTIDE ANALOG GMPCPP (CORE FOCUSED) organism=? DNA sequence DC(T11):DC(S36) DT(T12):DA(S35) DT(T13):DG(S34) DA(T14):DT(S33) DC(T15):DT(S32) DG(T16):DC(S31) DC(T17):DA(S30) DC(T18):DT(S29) DT(T19):DG(S28) DG(T20):DA(S27) DG(T21):DA(S26) DT(T22):DA(S25) DC(T23):DG(S24) DA(T24):DA(S15) DT(T25):DA(S14) DT(T26):DA(S13) DA(T27):DT(S12) DC(T28):DG(S11) DT(T29):DA(S10) DA(T30):DT(S9) DG(T31):DC(S8) DT(T32):DA(S7) DA(T33):DT(S6) DC(T34):DG(S5) DT(T35):DA(S4) DG(T36):DC(S3) DC(T37):DG(S2) DC(T38):DG(S1) chainB (193) ARG219 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) PRO394 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ASP395 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (453) GLN479 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (479) ARG505 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) PHE508 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (483) PHE509 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1035) LYS1061 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkpgylgnklsvsveqvsiakpmsndaverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiiRpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnPDatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlQqvsgytvvaekinfyrfishfrmvhRgsFFaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvKgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk >6hp7_A:HCP-like; title=ARBITRIUM PEPTIDE RECEPTOR FROM SPBETA PHAGE IN COMPLEX WITH 43 MER DNA organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DC(D2):DG(C42) DC(D3):DG(C41) DA(D4):DT(C40) DT(D5):DA(C39) DC(D6):DG(C38) DA(D7):DT(C37) DC(D8):DG(C36) DT(D9):DA(C35) DT(D10):DA(C34) DA(D11):DT(C33) DA(D12):DT(C32) DA(D13):DT(C31) DT(D14):DA(C30) DA(D15):DT(C29) DT(D16):DA(C28) DT(D17):DA(C27) DA(D18):DT(C26) DG(D19):DC(C25) DG(D20):DC(C24) DT(D21):DA(C23) DT(D22):DA(C22) DT(D23):DA(C21) DT(D24):DA(C20) DA(D25):DT(C19) DA(D26):DT(C18) DT(D27):DA(C17) DA(D28):DT(C16) DA(D29):DT(C15) DC(D30):DG(C14) DA(D31):DT(C13) DT(D32):DA(C12) DC(D33):DG(C11) DT(D34):DA(C10) DA(D35):DT(C9) DG(D36):DC(C8) DT(D37):DA(C7) DG(D38):DC(C6) DA(D39):DT(C5) DT(D40):DA(C4) DC(D41):DG(C3) DA(D42):DT(C2) DA(D43):DT(C1) chainA ( 30) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 ( 32) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 8 5 0 0 0 0 0 ( 33) PRO33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 35) TYR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 ( 36) ASP36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence meliriamkkdlendnslmnkwatvaglkNpNPlYDflnhdgktfnefssivnivksqypdreyelmkdyclnldvktkaarsaleyadanmffeiedvlidsmiscsnmkskeygkvykihrelsnsvitefeavkrlgklniktpemnsfsrllllyhylstgnfspmaqlikqidlseisenmyirntyqtrvhvlmsniklnensleecreyskkalestnilrfqvfsyltignsllfsnyelaqenflkglsisvqnenynmifqqalcflnnvwrkenkwinfesdsimdlqeqahcfinfnenskakevldkldllvhndnelamhyylkgrleqnkacfyssieyfkksndkflirlpllelqkmgenqkllellll >6hp7_AB:HCP-like; title=ARBITRIUM PEPTIDE RECEPTOR FROM SPBETA PHAGE IN COMPLEX WITH 43 MER DNA organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DC(D2):DG(C42) DC(D3):DG(C41) DA(D4):DT(C40) DT(D5):DA(C39) DC(D6):DG(C38) DA(D7):DT(C37) DC(D8):DG(C36) DT(D9):DA(C35) DT(D10):DA(C34) DA(D11):DT(C33) DA(D12):DT(C32) DA(D13):DT(C31) DT(D14):DA(C30) DA(D15):DT(C29) DT(D16):DA(C28) DT(D17):DA(C27) DA(D18):DT(C26) DG(D19):DC(C25) DG(D20):DC(C24) DT(D21):DA(C23) DT(D22):DA(C22) DT(D23):DA(C21) DT(D24):DA(C20) DA(D25):DT(C19) DA(D26):DT(C18) DT(D27):DA(C17) DA(D28):DT(C16) DA(D29):DT(C15) DC(D30):DG(C14) DA(D31):DT(C13) DT(D32):DA(C12) DC(D33):DG(C11) DT(D34):DA(C10) DA(D35):DT(C9) DG(D36):DC(C8) DT(D37):DA(C7) DG(D38):DC(C6) DA(D39):DT(C5) DT(D40):DA(C4) DC(D41):DG(C3) DA(D42):DT(C2) DA(D43):DT(C1) chainA ( 30) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 ( 32) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 8 5 0 0 0 0 0 ( 33) PRO33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 35) TYR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 ( 36) ASP36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB ( 30) ASN30 0 0 0 0 0 1 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN32 0 0 0 0 6 7 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) PRO33 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) TYR35 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meliriamkkdlendnslmnkwatvaglkNpNPlYDflnhdgktfnefssivnivksqypdreyelmkdyclnldvktkaarsaleyadanmffeiedvlidsmiscsnmkskeygkvykihrelsnsvitefeavkrlgklniktpemnsfsrllllyhylstgnfspmaqlikqidlseisenmyirntyqtrvhvlmsniklnensleecreyskkalestnilrfqvfsyltignsllfsnyelaqenflkglsisvqnenynmifqqalcflnnvwrkenkwinfesdsimdlqeqahcfinfnenskakevldkldllvhndnelamhyylkgrleqnkacfyssieyfkksndkflirlpllelqkmgenqkllellll/meliriamkkdlendnslmnkwatvaglkNpNPlYdflnhdgktfnefssivnivksqypdreyelmkdyclnldvktkaarsaleyadanmffeiedvlidsmiscsnmkskeygkvykihrelsnsvitefeavkrlgklniktpemnsfsrllllyhylstgnfspmaqlikqidlseisenmyirntyqtrvhvlmsniklnensleecreyskkalestnilrfqvfsyltignsllfsnyelaqenflkglsisvqnenynmifqqalcflnnvwrkenkwinfesdsimdlqeqahcfinfnenskakevldkldllvhndnelamhyylkgrleqnkacfyssieyfkksndkflirlpllelqkmgenqkllellll >6ht5_D:HMG-box; title=OCT4/SOX2:UTF1 STRUCTURE organism=? DNA sequence DC(A-1):DG(B20) DC(A0):DG(B19) DT(A1):DA(B18) DC(A2):DG(B17) DA(A3):DT(B16) DT(A4):DA(B15) DT(A5):DA(B14) DG(A6):DC(B13) DT(A7):DA(B12) DT(A8):DA(B11) DA(A9):DT(B10) DT(A10):DA(B9) DG(A11):DC(B8) DC(A12):DG(B7) DT(A13):DA(B6) DA(A14):DT(B5) DG(A15):DC(B4) DT(A16):DA(B3) DG(A17):DC(B2) DA(A18):DT(B1) chainD ( 5) ARG48 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 ( 8) ASN51 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) PHE53 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) MET54 0 0 0 0 0 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG61 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN73 0 0 0 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER77 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) TYR115 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 ( 76) ARG119 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 prot.sequence drvkRpmNaFMvwsrgqRrkmaqenpkmhNseiSkrlgaewkllsetekrpfideakrlralhmkehpdykYrprRk >6ht5_DE:HMG-box;lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=OCT4/SOX2:UTF1 STRUCTURE organism=MUS MUSCULUS DNA sequence DC(A-1):DG(B20) DC(A0):DG(B19) DT(A1):DA(B18) DC(A2):DG(B17) DA(A3):DT(B16) DT(A4):DA(B15) DT(A5):DA(B14) DG(A6):DC(B13) DT(A7):DA(B12) DT(A8):DA(B11) DA(A9):DT(B10) DT(A10):DA(B9) DG(A11):DC(B8) DC(A12):DG(B7) DT(A13):DA(B6) DA(A14):DT(B5) DG(A15):DC(B4) DT(A16):DA(B3) DG(A17):DC(B2) DA(A18):DT(B1) chainD ( 5) ARG48 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 ( 8) ASN51 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) PHE53 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) MET54 0 0 0 0 0 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG61 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN73 0 0 0 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER77 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) TYR115 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 ( 76) ARG119 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 chainE ( 46) GLN176 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 ( 47) THR177 0 0 0 0 0 0 0 0 0 0 0 8 5 4 0 0 0 0 0 0 ( 50) SER180 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 ( 51) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 1 9 4 0 0 0 0 0 prot.sequence drvkRpmNaFMvwsrgqRrkmaqenpkmhNseiSkrlgaewkllsetekrpfideakrlralhmkehpdykYrprRk/gadmkalqkeleqfakllkqkritlgytqadvgltlgvlfgkvfsQTtiSRfealqlslknmsklrpllekwveeadnnenlqeisksetlvqarkrkrts >6hts_M:Histone-fold; title=CRYO-EM STRUCTURE OF THE HUMAN INO80 COMPLEX BOUND TO NUCLEOSOME organism=? DNA sequence DC(Y-64):DG(X64) DC(Y-63):DG(X63) DC(Y-62):DG(X62) DG(Y-61):DC(X61) DG(Y-60):DC(X60) DT(Y-59):DA(X59) DG(Y-58):DC(X58) DC(Y-57):DG(X57) DC(Y-56):DG(X56) DG(Y-55):DC(X55) DA(Y-54):DT(X54) DG(Y-53):DC(X53) DG(Y-52):DC(X52) DC(Y-51):DG(X51) DC(Y-50):DG(X50) DG(Y-49):DC(X49) DC(Y-48):DG(X48) DT(Y-47):DA(X47) DC(Y-46):DG(X46) DA(Y-45):DT(X45) DA(Y-44):DT(X44) DT(Y-43):DA(X43) DT(Y-42):DA(X42) DG(Y-41):DC(X41) DG(Y-40):DC(X40) DT(Y-39):DA(X39) DC(Y-38):DG(X38) DG(Y-37):DC(X37) DT(Y-36):DA(X36) DA(Y-35):DT(X35) DG(Y-34):DC(X34) DA(Y-33):DT(X33) DC(Y-32):DG(X32) DA(Y-31):DT(X31) DG(Y-30):DC(X30) DC(Y-29):DG(X29) DT(Y-28):DA(X28) DC(Y-27):DG(X27) DT(Y-26):DA(X26) DA(Y-25):DT(X25) DG(Y-24):DC(X24) DC(Y-23):DG(X23) DA(Y-22):DT(X22) DC(Y-21):DG(X21) DC(Y-20):DG(X20) DG(Y-19):DC(X19) DC(Y-18):DG(X18) DT(Y-17):DA(X17) DT(Y-16):DA(X16) DA(Y-15):DT(X15) DA(Y-14):DT(X14) DA(Y-13):DT(X13) DC(Y-12):DG(X12) DG(Y-11):DC(X11) DC(Y-10):DG(X10) DA(Y-9):DT(X9) DC(Y-8):DG(X8) DG(Y-7):DC(X7) DT(Y-6):DA(X6) DA(Y-5):DT(X5) DC(Y-4):DG(X4) DG(Y-3):DC(X3) DC(Y-2):DG(X2) DG(Y-1):DC(X1) DC(Y0):DG(X0) DT(Y1):DA(X-1) DG(Y2):DC(X-2) DT(Y3):DA(X-3) DC(Y4):DG(X-4) DC(Y5):DG(X-5) DC(Y6):DG(X-6) DC(Y7):DG(X-7) DC(Y8):DG(X-8) DG(Y9):DC(X-9) DC(Y10):DG(X-10) DG(Y11):DC(X-11) DT(Y12):DA(X-12) DT(Y13):DA(X-13) DT(Y14):DA(X-14) DT(Y15):DA(X-15) DA(Y16):DT(X-16) DA(Y17):DT(X-17) DC(Y18):DG(X-18) DC(Y19):DG(X-19) DG(Y20):DC(X-20) DC(Y21):DG(X-21) DC(Y22):DG(X-22) DA(Y23):DT(X-23) DA(Y24):DT(X-24) DG(Y25):DC(X-25) DG(Y26):DC(X-26) DG(Y27):DC(X-27) DG(Y28):DC(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DT(Y31):DA(X-31) DA(Y32):DT(X-32) DC(Y33):DG(X-33) DT(Y34):DA(X-34) DC(Y35):DG(X-35) DC(Y36):DG(X-36) DC(Y37):DG(X-37) DT(Y38):DA(X-38) DA(Y39):DT(X-39) DG(Y40):DC(X-40) DT(Y41):DA(X-41) DC(Y42):DG(X-42) DT(Y43):DA(X-43) DC(Y44):DG(X-44) DA(Y46):DT(X-46) DG(Y47):DC(X-47) DG(Y48):DC(X-48) DC(Y49):DG(X-49) DA(Y50):DT(X-50) DC(Y51):DG(X-51) DG(Y52):DC(X-52) DT(Y53):DA(X-53) DG(Y54):DC(X-54) DT(Y55):DA(X-55) DC(Y56):DG(X-56) DA(Y57):DT(X-57) DG(Y58):DC(X-58) DA(Y59):DT(X-59) DT(Y60):DA(X-60) DA(Y61):DT(X-61) DT(Y62):DA(X-62) DA(Y63):DT(X-63) DT(Y64):DA(X-64) DA(Y65):DT(X-65) DC(Y66):DG(X-66) DA(Y67):DT(X-67) DT(Y68):DA(X-68) DC(Y69):DG(X-69) DC(Y70):DG(X-70) DT(Y71):DA(X-71) DG(Y72):DC(X-72) DT(Y73):DA(X-73) DG(Y74):DC(X-74) DC(Y75):DG(X-75) DA(Y76):DT(X-76) DT(Y77):DA(X-77) DG(Y78):DC(X-78) DT(Y79):DA(X-79) DA(Y80):DT(X-80) DC(Y81):DG(X-81) DT(Y82):DA(X-82) DC(Y83):DG(X-83) DG(Y84):DC(X-84) DG(Y85):DC(X-85) chainM ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >6i1l_D: title=CRYSTAL STRUCTURE OF FNCAS12A IN COMPLEX WITH A CRRNA GUIDE AND SSDNA TARGET organism=Francisella tularensis subsp. novicida (strain U112) / Francisella tularensis subsp. novicida (strain U112) DNA sequence DA(F-20) DT(F-19) DA(F-18) DG(F-17) DA(F-16) DA(F-15) DT(F-14) DT(F-13) DA(F-12) DC(F-11) DC(F-10) DT(F-9) DT(F-8) DT(F-7) DT(F-6) DA(F-5) DA(F-4) DT(F-3) DC(F-2) DT(F-1) chainD ( 14) SER14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (185) ASN185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 (289) PHE289 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) LYS296 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) GLU302 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) ASN305 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) LEU306 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) GLN309 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) LYS397 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) THR400 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (401) ASP401 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) GLN404 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (410) TYR410 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (567) ARG583 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (568) ASN584 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (867) PRO883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (949) ARG968 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence asiyqefvnkyslSktlrfelipqgktlenikarglilddekrakdykkakqiidkyhqffieeilssvcisedllqnysdvyfklkksdddnlqkdfksakdtikkqiseyikdsekfknlfnqnlidakkgqesdlilwlkqskdngielfkansditdidealeiiksfkgwttyfkgfheNrknvyssndiptsiiyrivddnlpkflenkakyeslkdkapeainyeqikkdlaeeltfdidyktsevnqrvfsldevfeianfnnylnqsgitkfntiiggkFvngentKrkginEyiNLysQqindktlkkykmsvlfkqilsdtesksfvidkleddsdvvttmqsfyeqiaafktveeksiketlsllfddlkaqkldlskiyfkndKslTDlsQqvfddYsvigtavleyitqqiapiakktekakylsletiklaleefnkhrdidkqcrfeeilanfaaipmifdeiaqnkdnlaqisikyqnqgkkdllqasaeddvkaikdlldqtnnllhklkifhisqsenildkdehfylvfeecyfelanivplynkiRNyitqkpysdekfklnfenstlangwdknkepdntailfikddkyylgvmnkknnkifddkaikenkgegykkivykllpgankmlpkvffsaksikfynpsedilrirnhsthtkngspqkgyekfefniedcrkfidfykqsiskhpewkdfgfrfsdtqrynsidefyrevenqgykltfenisesyidsvvnqgklylfqiynkdfsayskgrpnlhtlywkalfdernlqdvvyklngeaelfyrkqsipkkithpakeaianknkdnpkkesvfeydlikdkrftedkfffhcPitinfkssgankfndeinlllkekandvhilsidrgerhlayytlvdgkgniikqdtfniigmktnyhdklaaiekdrdsaRkdwkkinnikemkegylsqvvheiaklvieynaivvfqdlfkvekqvyqklekmlieklnylvfkdnefdktggvlrayqltapfetfkkmgkqtgiiyyvpagftskicpvtgfvnqlypkyesvsksqeffskfdkicynldkgyfefsfdyknfgdkaakgkwtiasfgsrlitrevyptkelekllkdysieyghgecikaaicgesdkkffakltsvlntilqmrnsktdylispvadvngnffdsrqapknmpqdadangayhiglkglmllgriknnqklnlvikneeyfefvqnrnn >6i52_B:Nucleic_acid-binding_proteins; title=YEAST RPA BOUND TO SSDNA organism=? DNA sequence DT(D26) DT(D25) DT(D24) DT(D23) DT(D22) DT(D21) DT(D20) DT(D19) DT(D18) DT(D17) DT(D16) DT(D15) DT(D14) DT(D13) DT(D8) DT(D9) DT(D10) DT(D11):DT(D13) DT(D12) chainB ( 1) THR32 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) ASN33 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 ( 91) LYS141 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) PHE143 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) ASN148 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) GLN150 0 0 0 1 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence TNtrvntltpvtikqileskqdiqdgpfvshnqelhhvcfvgvvrnitdhtanifltiedgtgqievrkwsedaaqqfeiggyvkvfgalKeFggkkNiQyavikpidsfnevlthhlevikchsiasgmmk >6i52_BC:Nucleic_acid-binding_proteins; title=YEAST RPA BOUND TO SSDNA organism=? DNA sequence DT(D26) DT(D25) DT(D24) DT(D23) DT(D22) DT(D21) DT(D20) DT(D19) DT(D18) DT(D17) DT(D16) DT(D15) DT(D14) DT(D13) DT(D8) DT(D9) DT(D10) DT(D11):DT(D13) DT(D12) chainB ( 1) THR32 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) ASN33 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 ( 91) LYS141 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) PHE143 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) ASN148 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) GLN150 0 0 0 1 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 36) LYS477 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 51) ASN492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 77) ARG518 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 10 0 ( 79) ILE520 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 ( 92) TRP533 0 0 0 0 0 0 0 4 46 0 0 0 0 0 0 0 0 0 0 ( 94) THR535 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 96) PHE537 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 11 0 (131) MET572 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG580 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (141) ARG582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (143) ASP584 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (145) TYR586 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (150) ARG591 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (152) ARG593 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 prot.sequence TNtrvntltpvtikqileskqdiqdgpfvshnqelhhvcfvgvvrnitdhtanifltiedgtgqievrkwsedaaqqfeiggyvkvfgalKeFggkkNiQyavikpidsfnevlthhlevikchsiasgmmk/kfiaqritiaraqaenlgrsekgdffsvkaaisflKvdnfaypacsnencNkkvleqpdgtwrcekcdtnnarpnwRyIltisiidetnqlWlTlFddqakqllgvdantlmslkeedpneftkitqsiqMneydfriRaReDtYndqsRiRytvanlhslnyraeadyladelskal >6i52_C:Nucleic_acid-binding_proteins; title=YEAST RPA BOUND TO SSDNA organism=? DNA sequence DT(D26) DT(D25) DT(D24) DT(D23) DT(D22) DT(D21) DT(D20) DT(D19) DT(D18) DT(D17) DT(D16) DT(D15) DT(D14) DT(D13) DT(D8) DT(D9) DT(D10) DT(D11):DT(D13) DT(D12) chainC ( 36) LYS477 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 51) ASN492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 77) ARG518 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 10 0 ( 79) ILE520 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 ( 92) TRP533 0 0 0 0 0 0 0 4 46 0 0 0 0 0 0 0 0 0 0 ( 94) THR535 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 96) PHE537 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 11 0 (131) MET572 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG580 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (141) ARG582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (143) ASP584 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (145) TYR586 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (150) ARG591 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (152) ARG593 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 prot.sequence kfiaqritiaraqaenlgrsekgdffsvkaaisflKvdnfaypacsnencNkkvleqpdgtwrcekcdtnnarpnwRyIltisiidetnqlWlTlFddqakqllgvdantlmslkeedpneftkitqsiqMneydfriRaReDtYndqsRiRytvanlhslnyraeadyladelskal >6i84_U:Histone-fold; title=STRUCTURE OF TRANSCRIBING RNA POLYMERASE II-NUCLEOSOME COMPLEX organism=? DNA sequence DA(T56):DT(N158) DT(T57):DA(N157) DC(T58):DG(N156) DA(T59):DT(N155) DG(T60):DC(N154) DA(T61):DT(N153) DA(T62):DT(N152) DT(T63):DA(N151) DC(T64):DG(N150) DC(T65):DG(N149) DC(T66):DG(N148) DG(T67):DC(N147) DG(T68):DC(N146) DT(T69):DA(N145) DG(T70):DC(N144) DC(T71):DG(N143) DC(T72):DG(N142) DG(T73):DC(N141) DA(T74):DT(N140) DG(T75):DC(N139) DG(T76):DC(N138) DC(T77):DG(N137) DC(T78):DG(N136) DG(T79):DC(N135) DC(T80):DG(N134) DT(T81):DA(N133) DC(T82):DG(N132) DA(T83):DT(N131) DA(T84):DT(N130) DT(T85):DA(N129) DT(T86):DA(N128) DG(T87):DC(N127) DG(T88):DC(N126) DT(T89):DA(N125) DC(T90):DG(N124) DG(T91):DC(N123) DT(T92):DA(N122) DA(T93):DT(N121) DG(T94):DC(N120) DA(T95):DT(N119) DC(T96):DG(N118) DA(T97):DT(N117) DG(T98):DC(N116) DC(T99):DG(N115) DT(T100):DA(N114) DC(T101):DG(N113) DT(T102):DA(N112) DA(T103):DT(N111) DG(T104):DC(N110) DC(T105):DG(N109) DA(T106):DT(N108) DC(T107):DG(N107) DC(T108):DG(N106) DG(T109):DC(N105) DC(T110):DG(N104) DT(T111):DA(N103) DT(T112):DA(N102) DA(T113):DT(N101) DA(T114):DT(N100) DA(T115):DT(N99) DC(T116):DG(N98) DG(T117):DC(N97) DC(T118):DG(N96) DA(T119):DT(N95) DC(T120):DG(N94) DG(T121):DC(N93) DT(T122):DA(N92) DA(T123):DT(N91) DC(T124):DG(N90) DG(T125):DC(N89) DC(T126):DG(N88) DG(T127):DC(N87) DC(T128):DG(N86) DT(T129):DA(N85) DG(T130):DC(N84) DT(T131):DA(N83) DC(T132):DG(N82) DC(T133):DG(N81) DC(T134):DG(N80) DC(T135):DG(N79) DC(T136):DG(N78) DG(T137):DC(N77) DC(T138):DG(N76) DG(T139):DC(N75) DT(T140):DA(N74) DT(T141):DA(N73) DT(T142):DA(N72) DT(T143):DA(N71) DA(T144):DT(N70) DA(T145):DT(N69) DC(T146):DG(N68) DC(T147):DG(N67) DG(T148):DC(N66) DC(T149):DG(N65) DC(T150):DG(N64) DA(T151):DT(N63) DA(T152):DT(N62) DG(T153):DC(N61) DG(T154):DC(N60) DG(T155):DC(N59) DG(T156):DC(N58) DA(T157):DT(N57) DT(T158):DA(N56) DT(T159):DA(N55) DA(T160):DT(N54) DC(T161):DG(N53) DT(T162):DA(N52) DC(T163):DG(N51) DC(T164):DG(N50) DC(T165):DG(N49) DT(T166):DA(N48) DA(T167):DT(N47) DG(T168):DC(N46) DT(T169):DA(N45) DC(T170):DG(N44) DT(T171):DA(N43) DC(T172):DG(N42) DC(T173):DG(N41) DA(T174):DT(N40) DG(T175):DC(N39) DG(T176):DC(N38) DC(T177):DG(N37) DA(T178):DT(N36) DC(T179):DG(N35) DG(T180):DC(N34) DT(T181):DA(N33) DG(T182):DC(N32) DT(T183):DA(N31) DC(T184):DG(N30) DA(T185):DT(N29) DG(T186):DC(N28) DA(T187):DT(N27) DT(T188):DA(N26) DA(T189):DT(N25) DT(T190):DA(N24) DA(T191):DT(N23) DT(T192):DA(N22) DA(T193):DT(N21) DC(T194):DG(N20) DA(T195):DT(N19) DT(T196):DA(N18) DC(T197):DG(N17) DG(T198):DC(N16) DA(T199):DT(N15) DT(T200):DA(N14) DA(T201):DT(N13) DT(T202):DA(N12) DA(T203):DT(N11) DG(T204):DC(N10) DG(T205):DC(N9) DA(T206):DT(N8) DA(T207):DT(N7) DT(T208):DA(N6) DA(T209):DT(N5) DA(T210):DT(N4) DC(T211):DG(N3) DA(T212):DT(N2) DG(T213):DC(N1) chainU ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >6i8a_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE CRYSTAL STRUCTURE OF THE POL2 CATALYTIC DOMAIN OF DNA POLYMERASE EPSILON CARRYING A P301R SUBSTITUTION. organism=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) DNA sequence DA(T7):DT(P10) DA(T8):DT(P9) DC(T9):DG(P8) DG(T10):DC(P7) DC(T11):DG(P6) DG(T12):DC(P5) DG(T13):DC(P4) DT(T14):DA(P3) DT(T15):DA(P2) DA(T16):DT(P1) chainA (889) LYS967 4 4 0 0 0 0 0 0 0 0 (910) ARG988 0 0 7 6 0 0 0 0 0 0 prot.sequence alsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqenqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnannnvqrniynvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafdiettkpplkfrdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwvkrdsylpqgsqglkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgtgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasmypnimttnrlqpdsikaetcarklkwawrgeffpskmdeynmikralqnetfpnknltfdelsyadqvihikkrlteysrkvyhrvkvseivereaivcqrenpfyvdtvksfrdrryefkglaktwkgnlskidpsdkhardeakkmivlydslqlahkvilnsfygyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKryavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenrsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrkia >6ide_A:C-terminal_effector_domain_of_the_bipartite_response_regulators;PYP-like_sensor_domain_PAS_domain; title=CRYSTAL STRUCTURE OF THE VIBRIO CHOLERA VQMA-LIGAND-DNA COMPLEX PROVIDES MOLECULAR MECHANISMS FOR DRUG DESIGN organism=Vibrio cholerae DNA sequence DA(D1):DT(C18) DG(D2):DC(C17) DG(D3):DC(C16) DG(D4):DC(C15) DG(D5):DC(C14) DG(D6):DC(C13) DG(D7):DC(C12) DA(D8):DT(C11) DT(D9):DA(C10) DT(D10):DA(C9) DT(D11):DA(C8) DC(D12):DG(C7) DC(D13):DG(C6) DC(D14):DG(C5) DC(D15):DG(C4) DC(D16):DG(C3) DC(D17):DG(C2) DT(D18):DA(C1) chainA (173) LYS185 0 0 0 12 12 5 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR186 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) GLU188 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pnhltleqislfkqlpgywgckdlnsvfvyanqaygeliglkraedcigrtdfempsptaacaaefqqqdryvietghsvkvldihpypdghwhahiftktpwrdsqgkiqgtiffgqdltdtailevghwvcratglsttlkltaresevlflllygkkpqhiarvmgisiKTvEgyeaklrskfgalskdqlidlaldrgfgsvipktllrkqlsvvlsdhtip >6ide_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators;PYP-like_sensor_domain_PAS_domain; title=CRYSTAL STRUCTURE OF THE VIBRIO CHOLERA VQMA-LIGAND-DNA COMPLEX PROVIDES MOLECULAR MECHANISMS FOR DRUG DESIGN organism=Vibrio cholerae DNA sequence DA(C1):DT(D18) DG(C2):DC(D17) DG(C3):DC(D16) DG(C4):DC(D15) DG(C5):DC(D14) DG(C6):DC(D13) DG(C7):DC(D12) DA(C8):DT(D11) DA(C9):DT(D10) DA(C10):DT(D9) DT(C11):DA(D8) DC(C12):DG(D7) DC(C13):DG(D6) DC(C14):DG(D5) DC(C15):DG(D4) DC(C16):DG(D3) DC(C17):DG(D2) DT(C18):DA(D1) chainA (173) LYS185 0 0 0 0 0 0 0 0 0 0 0 0 5 12 12 0 0 0 (174) THR186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 (176) GLU188 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 chainB (177) LYS185 0 0 1 13 9 3 0 0 0 0 0 0 0 0 0 0 0 0 (178) THR186 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) GLU188 0 0 0 0 2 9 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pnhltleqislfkqlpgywgckdlnsvfvyanqaygeliglkraedcigrtdfempsptaacaaefqqqdryvietghsvkvldihpypdghwhahiftktpwrdsqgkiqgtiffgqdltdtailevghwvcratglsttlkltaresevlflllygkkpqhiarvmgisiKTvEgyeaklrskfgalskdqlidlaldrgfgsvipktllrkqlsvvlsdhtip/pnhltleqislfkqlpgywgckdlnsvfvyanqaygeliglkraedcigrtdfempsptaacaaefqqqdryvietghsvkvldihpypdghwhahiftktpwrdsqgkiqgtiffgqdltdtailevghwvcratglststtftlkltaresevlflllygkkpqhiarvmgisiKTvEgyeaklrskfgalskdqlidlaldrgfgsvipktllrkqlsvvlsdht >6ido_B:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE SIGMA4 OF SIGMAS FUSING WITH THE RNA POLYMERASE BETA-FLAP-TIP-HELIX IN COMPLEX WITH -35 ELEMENT DNA organism=ESCHERICHIA COLI, KLEBSIELLA PNEUMONIAE DNA sequence DG(E1):DC(F14) DA(E2):DT(F13) DT(E3):DA(F12) DT(E4):DA(F11) DT(E5):DA(F10) DG(E6):DC(F9) DT(E7):DA(F8) DC(E8):DG(F7) DA(E9):DT(F6) DA(E10):DT(F5) DG(E11):DC(F4) DT(E12):DA(F3) DG(E13):DC(F2) DG(E14):DC(F1) chainB ( 32) LEU48 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 42) THR58 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 43) ARG59 0 0 0 0 1 16 9 0 0 0 0 0 0 0 ( 44) GLU60 0 0 0 0 0 0 2 4 7 6 0 0 0 0 ( 45) ARG61 0 0 0 0 0 0 0 0 0 3 7 0 0 0 ( 47) ARG63 0 0 0 0 0 0 12 8 0 0 0 0 0 0 ( 48) GLN64 0 0 0 0 0 0 0 0 0 4 9 0 0 0 prot.sequence qsivkwlfelnakqrevlarrfgllgyeaatLedvgreiglTRERvRQiqveglrrlreilqgtqltpeekllraif >6ifm_B:AbrB/MazE/MraZ-like; title=CRYSTAL STRUCTURE OF DNA BOUND VAPBC FROM SALMONELLA TYPHIMURIUM organism=? DNA sequence DC(M1):DG(N27) DC(M2):DG(N26) DT(M3):DA(N25) DG(M4):DC(N24) DT(M5):DA(N23) DA(M6):DT(N22) DT(M7):DA(N21) DA(M8):DT(N20) DT(M9):DA(N19) DC(M10):DG(N18) DT(M11):DA(N17) DC(M12):DG(N16) DT(M13):DA(N15) DT(M14):DA(N14) DT(M15):DA(N13) DG(M16):DC(N12) DA(M17):DT(N11) DC(M18):DG(N10) DA(M19):DT(N9) DT(M20):DA(N8) DA(M21):DT(N7) DT(M22):DA(N6) DA(M23):DT(N5) DC(M24):DG(N4) DA(M25):DT(N3) DT(M26):DA(N2) DC(M27):DG(N1) chainB ( 6) PHE6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 8) SER8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 9) ASN9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 15 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 16 3 0 0 0 0 0 0 0 0 0 0 ( 11) THR11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 15) ARG15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 prot.sequence mhttlFfSNRTqavRlpksisfpedvkhveiiavgrsriitpvgeswdswfdgegastdfmstreqpa >6ifm_BDFH:AbrB/MazE/MraZ-like; title=CRYSTAL STRUCTURE OF DNA BOUND VAPBC FROM SALMONELLA TYPHIMURIUM organism=? DNA sequence DC(M1):DG(N27) DC(M2):DG(N26) DT(M3):DA(N25) DG(M4):DC(N24) DT(M5):DA(N23) DA(M6):DT(N22) DT(M7):DA(N21) DA(M8):DT(N20) DT(M9):DA(N19) DC(M10):DG(N18) DT(M11):DA(N17) DC(M12):DG(N16) DT(M13):DA(N15) DT(M14):DA(N14) DT(M15):DA(N13) DG(M16):DC(N12) DA(M17):DT(N11) DC(M18):DG(N10) DA(M19):DT(N9) DT(M20):DA(N8) DA(M21):DT(N7) DT(M22):DA(N6) DA(M23):DT(N5) DC(M24):DG(N4) DA(M25):DT(N3) DT(M26):DA(N2) DC(M27):DG(N1) chainB ( 6) PHE6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 8) SER8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 9) ASN9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 15 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 16 3 0 0 0 0 0 0 0 0 0 0 ( 11) THR11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 15) ARG15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 chainF ( 6) PHE6 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) SER8 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ASN9 0 0 0 0 0 0 0 0 10 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 0 6 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) THR11 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG15 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 6) PHE6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 8) SER8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 ( 9) ASN9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 6 4 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 ( 11) THR11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 15) ARG15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 chainD ( 6) PHE6 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) SER8 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ASN9 0 0 1 6 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) THR11 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG15 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mhttlFfSNRTqavRlpksisfpedvkhveiiavgrsriitpvgeswdswfdgegastdfmstreqpa/mhttlFfSNrTqavRlpksisfpedvkhveiiavgrsriitpvgeswdswfdgegastdfmstreqpa/mhttlFfSNRTqavRlpksisfpedvkhveiiavgrsriitpvgeswdswfdgegastdfmstreqpa/mhttlFfSNRTqavRlpksisfpedvkhveiiavgrsriitpvgeswdswfdgegastdfmstreqpa >6ig1_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=DNA POLYMERASE IV - DNA TERNARY COMPLEX 10 organism=ESCHERICHIA COLI K-12 DNA sequence DG(C860):DC(B854) DG(C861):DC(B853) DG(C862):DC(B852) DT(C863):DA(B851) DC(C864):DG(B850) DC(C865):DG(B849) DT(C866):DA(B848) DA(C867):DT(B847) DG(C868):DC(B846) DG(C869):DC(B845) DA(C870):DT(B844) DC(C871):DG(B843) DC(C872):DG(B842) DC(C873):DG(B841) TTP(C901):DA(B840) chainA ( 9) ASP8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 11) ASP10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 12) CYS11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 13) PHE12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 14) PHE13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 41) VAL40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 43) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 44) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 50) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 56) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 57) ALA56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (104) ASP103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (105) GLU104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (158) LYS157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (247) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (286) ARG285 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcffaavemrdnpalrdipiaiggsrerrgViStanyparkfgvrsAmptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvKlkfddfqqttqEhvwprlnkadliatarktwderrggrgvrlvglhvtlldp >6iid_B:His-Me_finger_endonucleases; title=HUMAN EXOG-H140A IN COMPLEX WITH RNA-DNA CHIMERIC DUPLEX organism=Homo sapiens DNA sequence DA(H5) DC(H6) DA(H7) DT(H8) DC(H9) DC(H10) DC(H11) DG(H12) chainB (111) PHE168 0 0 0 0 0 0 2 0 (115) SER172 0 0 0 0 0 0 0 8 (119) ASN176 0 0 0 0 0 0 0 1 (250) PHE307 0 0 0 0 0 0 0 1 (254) LEU311 0 0 0 0 0 0 0 7 (258) LYS315 0 0 0 0 0 0 2 7 prot.sequence ekavleqfgfpltgtearcytnhalsydqakrvprwvlehiskskimgdadrkhckfkpdpnipptfsafnedyvgsgwsrgamapagnnkfsskamaetfylsnivpqdFdnnSgywNriemycrelterfedvwvvsgpltlpqtrgdgkkivsyqvigednvavpshlykvilarrssvsteplalgafvvpneaigfqpqltefqvslqdleklsglvffphldrtsdirnicsvdtcklldfqeFtlyLstrKieglekimenlknaeiepddyfmsryekklee >6iis_A:Tudor/PWWP/MBT; title=COMPLEX STRUCTURE OF THE HRP3 PWWP DOMAIN WITH BOTH A 16-BP TA-RICH DNA AND AN H3K36ME3-CONTAINING HISTONE PEPTIDE organism=Homo sapiens DNA sequence DT(D1):DA(C10) DA(D2):DT(C9) DT(D3):DA(C8) DA(D4):DT(C7) DT(D5):DA(C6) DA(D6):DT(C5) DT(D7):DA(C4) DA(D8):DT(C3) DT(D9):DA(C2) DA(D10):DT(C1) chainA ( 77) LYS77 5 0 0 0 0 0 0 0 0 0 prot.sequence marprpreykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgpkdlfpykeykdkfgksnKrkgfneglweiennpgvkftgy >6iis_AB:Tudor/PWWP/MBT; title=COMPLEX STRUCTURE OF THE HRP3 PWWP DOMAIN WITH BOTH A 16-BP TA-RICH DNA AND AN H3K36ME3-CONTAINING HISTONE PEPTIDE organism=Homo sapiens DNA sequence DT(C1):DA(D10) DA(C2):DT(D9) DT(C3):DA(D8) DA(C4):DT(D7) DT(C5):DA(D6) DA(C6):DT(D5) DT(C7):DA(D4) DA(C8):DT(D3) DT(C9):DA(D2) DA(C10):DT(D1) chainA ( 77) LYS77 0 0 0 0 0 0 0 0 0 5 chainB ( 77) LYS77 0 0 0 0 3 5 3 0 0 0 prot.sequence marprpreykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgpkdlfpykeykdkfgksnKrkgfneglweiennpgvkftgy/marprpreykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgpkdlfpykeykdkfgksnKrkgfneglweiennpgvkftgy >6iit_AB:Tudor/PWWP/MBT; title=COMPLEX STRUCTURE OF THE HRP3 PWWP DOMAIN WITH BOTH A 16-BP TA-RICH DNA AND AN H3K36ME2-CONTAINING HISTONE PEPTIDE organism=Homo sapiens DNA sequence DT(C1):DA(D10) DA(C2):DT(D9) DT(C3):DA(D8) DA(C4):DT(D7) DT(C5):DA(D6) DA(C6):DT(D5) DT(C7):DA(D4) DA(C8):DT(D3) DT(C9):DA(D2) DA(C10):DT(D1) chainA chainB ( 78) LYS77 0 0 0 0 0 0 2 5 0 0 prot.sequence marprpreykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgpkdlfpykeykdkfgksnkrkgfneglweiennpgvkftgy/smarprpreykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgpkdlfpykeykdkfgksnKrkgfneglweiennpgvkftgy >6iit_B:Tudor/PWWP/MBT; title=COMPLEX STRUCTURE OF THE HRP3 PWWP DOMAIN WITH BOTH A 16-BP TA-RICH DNA AND AN H3K36ME2-CONTAINING HISTONE PEPTIDE organism=Homo sapiens DNA sequence DT(D1):DA(C10) DA(D2):DT(C9) DT(D3):DA(C8) DA(D4):DT(C7) DT(D5):DA(C6) DA(D6):DT(C5) DT(D7):DA(C4) DA(D8):DT(C3) DT(D9):DA(C2) DA(D10):DT(C1) chainB ( 78) LYS77 0 0 5 2 0 0 0 0 0 0 prot.sequence smarprpreykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgpkdlfpykeykdkfgksnKrkgfneglweiennpgvkftgy >6ik9_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/G112S/D113A/Y115F/F116Y/F160L/I159L:DNA:DGTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(E-1) DC(E0) DG(E1):DC(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainA ( 24) TRP24 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 chainB (245) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 (325) PHE346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfRelnkrtqdfwevqlgIphpaglkqkksvtvldvsaafysvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPallqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnqktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnWasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepFknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6ik9_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/G112S/D113A/Y115F/F116Y/F160L/I159L:DNA:DGTP TERNARY COMPLEX organism=? DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DC(F0) DG(F1):DC(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 24) TRP24 0 0 0 53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP76 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (501) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvsaafysvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPallqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanretklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs >6ik9_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/G112S/D113A/Y115F/F116Y/F160L/I159L:DNA:DGTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DC(F0) DG(F1):DC(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 24) TRP24 0 0 0 53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP76 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (501) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvsaafysvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPallqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanretklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwpltEekikalveictemekegkiskigpenpyntpvfaikKkdstkwrklvdfReLnKrtqdfwevqlgiphpAglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfrkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrgTkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6ika_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/G112S/D113A/Y115F/F116Y/F160L/I159L:DNA:ENTECAVIR-TRIPHOSPHATE TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 / HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(E-1) DC(E0) DG(E1):DC(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainA ( 24) TRP24 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP76 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 chainB (245) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 (325) PHE346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvsaafysvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPallqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnqktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnWasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepFknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6ika_B:DNA/RNA_polymerases; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/G112S/D113A/Y115F/F116Y/F160L/I159L:DNA:ENTECAVIR-TRIPHOSPHATE TERNARY COMPLEX organism=? DNA sequence DT(E-1) DC(E0) DG(E1):DC(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainB (245) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 (325) PHE346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnWasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepFknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6ika_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/G112S/D113A/Y115F/F116Y/F160L/I159L:DNA:ENTECAVIR-TRIPHOSPHATE TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 / HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DC(F0) DG(F1):DC(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 24) TRP24 0 0 0 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP76 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (501) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvsaafysvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPallqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanretklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwpltEekikalveictemekegkiskigpenpyntpvfaikKkdstkwrklvdfReLnKrtqdfwevqlgiphpAglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfrkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrgTkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6imj_A:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=THE CRYSTAL STRUCTURE OF SE-ASFVLIG:DNA COMPLEX organism=African swine fever virus DNA sequence DC(C3):DG(D20) DG(C4):DC(D19) DG(C5):DC(D18) DG(C6):DC(D17) DA(C7):DT(D16) DT(C8):DA(D15) DG(C9):DC(D14) DC(C10):DG(D13) DT(C11):DC(D12) DG(C12):DC(D11) DG(C13):DC(D10) DT(C14):DA(D9) DC(C15):DG(D8) DG(C16):DC(D7) DG(C17):DC(D6) DA(C18):DT(D5) DC(C19):DG(D4) DT(C20):DA(D3) DG(C21):DC(D2) chainA ( 89) LYS89 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 0 0 0 0 0 3 9 8 0 0 0 0 0 prot.sequence mlnqfpgqysnnifcfppiesetksgkkaswiicvqvvqhntiipitdemfstdvkdavaeiftkffveegavriskmtrvtegknlgKknattvvhqafkdalskynRharqkrrgmippmlvkyfniipktffeeetdpivqrkrngvravacqqgdgcillysrtekeflgldnikkelkqlylfidvrvyldgelylhrkplqwiagqanaktdsselhfyvfdcfwsdqlqmpsnkrqqlltnifkqkedltfihqvenfsvknvdealrlkaqfikegyegaivrnangpyepgynnyhsahlaklkplldaefilvdytqgkkgkdlgailwvcelpnkkrfvvtpkhltyadryalfqkltpalfkkhlygkeltveyaelspgiplqaravgfrepinvleii >6imj_AB:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=THE CRYSTAL STRUCTURE OF SE-ASFVLIG:DNA COMPLEX organism=African swine fever virus DNA sequence DC(C3):DG(D20) DG(C4):DC(D19) DG(C5):DC(D18) DG(C6):DC(D17) DA(C7):DT(D16) DT(C8):DA(D15) DG(C9):DC(D14) DC(C10):DG(D13) DT(C11):DC(D12) DG(C12):DC(D11) DG(C13):DC(D10) DT(C14):DA(D9) DC(C15):DG(D8) DG(C16):DC(D7) DG(C17):DC(D6) DA(C18):DT(D5) DC(C19):DG(D4) DT(C20):DA(D3) DG(C21):DC(D2) chainA ( 89) LYS89 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 0 0 0 0 0 3 9 8 0 0 0 0 0 chainB ( 89) LYS89 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 (109) ARG109 0 0 4 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) GLN113 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlnqfpgqysnnifcfppiesetksgkkaswiicvqvvqhntiipitdemfstdvkdavaeiftkffveegavriskmtrvtegknlgKknattvvhqafkdalskynRharqkrrgmippmlvkyfniipktffeeetdpivqrkrngvravacqqgdgcillysrtekeflgldnikkelkqlylfidvrvyldgelylhrkplqwiagqanaktdsselhfyvfdcfwsdqlqmpsnkrqqlltnifkqkedltfihqvenfsvknvdealrlkaqfikegyegaivrnangpyepgynnyhsahlaklkplldaefilvdytqgkkgkdlgailwvcelpnkkrfvvtpkhltyadryalfqkltpalfkkhlygkeltveyaelspgiplqaravgfrepinvleii/mlnqfpgqysnnifcfppiesetksgkkaswiicvqvvqhntiipitdemfstdvkdavaeiftkffveegavriskmtrvtegknlgKknattvvhqafkdalskynRharQkrrgmippmlvkyfniipktffeeetdpivqrkrngvravacqqgdgcillysrtekeflgldnikkelkqlylfidvrvyldgelylhrkplqwiagqanaksselhfyvfdcfwsdqlqmpsnkrqqlltnifkqkedltfihqvenfsvknvdealrlkaqfikegyegaivrnangpyepgynnyhsahlaklkplldaefilvdytqgkkgkdlgailwvcelpnkkrfvvtpkhltyadryalfqkltpalfkkhlygkeltveyaelsptgiplqaravgfrepinvleii >6imk_A:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=THE CRYSTAL STRUCTURE OF ASFVLIG:CG COMPLEX organism=African swine fever virus DNA sequence DT(D1):DA(C22) DC(D2):DG(C21) DC(D3):DG(C20) DG(D4):DC(C19) DG(D5):DC(C18) DG(D6):DC(C17) DA(D7):DT(C16) DT(D8):DA(C15) DG(D9):DC(C14) DC(D10):DG(C13) DG(D11):DC(C12) DG(D12):DC(C11) DG(E13):DC(C10) DT(E14):DA(C9) DC(E15):DG(C8) DG(E16):DC(C7) DG(E17):DC(C6) DA(E18):DT(C5) DC(E19):DG(C4) DT(E20):DA(C3) DG(E21):DC(C2) DG(E22):DC(C1) chainA ( 75) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (217) ASN219 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (335) LYS337 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 0 (401) GLN403 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence smlnqfpgqysnnifcfppiesetksgkkaswiicvqvvqhntiipitdemfstdvkdavaeiftkffveegavRiskmtrvtegknlgkknattvvhqafkdalskynrharqkrgnrgmippmlvkyfniipktffeeetdpivqrkrngvravacqqgdgcillysrtekeflgldnikkelkqlylfidvrvyldgelylhrkplqwiagqaNaktdsselhfyvfdcfwsdqlqmpsnkrqqlltnifkqkedltfihqvenfsvknvdealrlkaqfikegyegaivrnangpyepgynnyhsahlaklkplldaefilvdytqgkkgKdlgailwvcelpnkkrfvvtpkhltyadryalfqkltpalfkkhlygkeltveyaelspktgiplQaravgfre >6iml_A:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=THE CRYSTAL STRUCTURE OF ASFVLIG:CT1 COMPLEX organism=African swine fever virus DNA sequence DC(C2):DG(E21) DA(C3):DT(E20) DG(C4):DC(E19) DT(C5):DA(E18) DC(C6):DG(E17) DC(C7):DG(E16) DG(C8):DC(E15) DA(C9):DT(E14) DC(C10):DG(E13) DC(C11):DT(D12) DC(C12):DG(D11) DG(C13):DC(D10) DC(C14):DG(D9) DA(C15):DT(D8) DT(C16):DA(D7) DC(C17):DG(D6) DC(C18):DG(D5) DC(C19):DG(D4) DG(C20):DC(D3) DG(C21):DC(D2) DA(C22):DT(D1) chainA (213) ASN219 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (331) LYS337 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) GLN403 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlnqfpgqysnnifcfppiesetksgkkaswiicvqvvqhntiipitdemfstdvkdavaeiftkffveegavriskmtrvtegkNlgkknattvvhqafkdalskynrharqkrgmippmlvkyfniipktffeeetdpivqrkrngvravacqqgdgcillysrtekeflgldnikkelkqlylfidvrvyldgelylhrkplqwiagqaNaktdsselhfyvfdcfwsdqlqmpsnkrqqlltnifkqkedltfihqvenfsvknvdealrlkaqfikegyegaivrnangpyepgynNyhsahlaklkplldaefilvdytqgkkgKdlgailwvcelpnkkrfvvtpkhltyadryalfqkltpalfkkhlygkeltveyaelspktgiplQaravgf >6imn_B:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=THE CRYSTAL STRUCTURE OF ASFVLIG:CT2 COMPLEX organism=African swine fever virus DNA sequence DT(D1):DA(C22) DC(D2):DG(C21) DC(D3):DG(C20) DG(D4):DC(C19) DG(D5):DC(C18) DG(D6):DC(C17) DA(D7):DT(C16) DT(D8):DA(C15) DG(D9):DC(C14) DC(D10):DG(C13) DG(D11):DC(C12) DT(D12):DC(C11) DG(D13):DC(C10) DT(D14):DA(C9) DC(D15):DG(C8) DG(D16):DC(C7) DG(D17):DC(C6) DA(D18):DT(C5) DC(D19):DG(C4) DT(D20):DA(C3) DG(D21):DC(C2) DG(D22):DC(C1) chainB (166) ARG172 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (213) ASN219 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (331) LYS337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 (397) GLN403 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 prot.sequence lnqfpgqysnnifcfppiesetksgkkaswiicvqvvqhntiipitdemfstdvkdavaeiftkffveegavriskmtrvtegknlgkknattvvhqafkdalskynrharqkrggmippmlvkyfniipktffeeetdpivqrkrngvravacqqgdgcillysRtekeflgldnikkelkqlylfidvrvyldgelylhrkplqwiagqaNaktdsselhfyvfdcfwsdqlqmpsnkrqqlltnifkqkedltfihqvenfsvknvdealrlkaqfikegyegaivrnangpyepgynnyhsahlaklkplldaefilvdytqgkkgKdlgailwvcelpnkkrfvvtpkhltyadryalfqkltpalfkkhlygkeltveyaelspktgiplQaravgfrepin >6inq_gh:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=RNA POLYMERASE II ELONGATION COMPLEX STALLED AT SHL(-1) OF THE NUCLEOSOME, WITH FOREIGN DNA (+1 POSITION) organism=HOMO SAPIENS DNA sequence DC(036):DG(1-36) DC(037):DG(1-37) DA(038):DT(1-38) DA(039):DT(1-39) DG(040):DC(1-40) DA(041):DT(1-41) DC(042):DG(1-42) DA(043):DT(1-43) DC(044):DG(1-44) DC(045):DG(1-45) DA(046):DT(1-46) DG(047):DC(1-47) DG(048):DC(1-48) DC(049):DG(1-49) DA(050):DT(1-50) DC(051):DG(1-51) DG(052):DC(1-52) DA(053):DT(1-53) DG(054):DC(1-54) DA(055):DT(1-55) DC(056):DG(1-56) DA(057):DT(1-57) DG(058):DC(1-58) DA(060):DT(1-59) DA(061):DT(1-61) DA(062):DT(1-62) DA(063):DT(1-63) DA(064):DT(1-64) DA(065):DT(1-65) DC(066):DG(1-66) chaing ( 29) ARG42 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 chainh prot.sequence aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtAvrlllpgelakhavsegtkavtkytsa >6ipu_A:Histone-fold; title=HUMAN NUCLEOSOME CORE PARTICLE CONTAINING 145 BP OF DNA organism=? DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >6ipu_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN NUCLEOSOME CORE PARTICLE CONTAINING 145 BP OF DNA organism=HOMO SAPIENS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ILE36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkGnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/rsrkesysiyvykvlkqvhpdtgiSskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/rsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6iq4_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE CROSS-LINKED WITH A HETERO-BINUCLEAR MOLECULE POSSESSING RAPTA AND GOLD(I) 4-(DIPHENYLPHOSPHINO)BENZOIC ACID GROUPS. organism=HOMO SAPIENS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ILE36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/rsrkesysiyvykvlkqvhpdtgiSskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/rsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6iq4_G:Histone-fold; title=NUCLEOSOME CORE PARTICLE CROSS-LINKED WITH A HETERO-BINUCLEAR MOLECULE POSSESSING RAPTA AND GOLD(I) 4-(DIPHENYLPHOSPHINO)BENZOIC ACID GROUPS. organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DG(I13):DC(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DA(I21):DT(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DG(I24):DC(J-24) DA(I25):DT(J-25) DG(I26):DC(J-26) DC(I27):DG(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DT(I56):DA(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk >6ir8_A:WRKY_DNA-binding_domain; title=RICE WRKY/DNA COMPLEX organism=ORYZA SATIVA JAPONICA GROUP DNA sequence DG(B1):DC(C14) DT(B3):DA(C12) DA(B4):DT(C11) DT(B5):DA(C10) DT(B6):DA(C9) DT(B7):DA(C8) DG(B8):DC(C7) DA(B9):DT(C6) DC(B10):DG(C5) DC(B11):DG(C4) DG(B12):DC(C3) DG(B13):DC(C2) DA(B14):DT(C1) chainA ( 15) ARG124 0 0 2 5 0 0 0 0 0 0 0 0 0 ( 16) LYS125 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 17) TYR126 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 19) GLN128 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 20) LYS129 0 0 0 0 0 0 0 5 14 9 0 0 0 ( 31) TYR140 0 0 0 0 0 0 0 6 2 0 0 0 0 prot.sequence nsvvvknlddgqawRKYgQKeiqnskhpkaYfrcthkydqlctaqrqvqrcdddpasyrvtyigehtcr >6ir9_e:Histone-fold; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH ELF1 AND SPT4/5, STALLED AT SHL(-1) OF THE NUCLEOSOME organism=? DNA sequence DT(N-55):DA(T55) DC(N-54):DG(T54) DT(N-53):DA(T53) DC(N-52):DG(T52) DG(N-51):DC(T51) DT(N-50):DA(T50) DG(N-49):DC(T49) DC(N-48):DG(T48) DC(N-47):DG(T47) DT(N-46):DA(T46) DG(N-45):DC(T45) DG(N-44):DC(T44) DT(N-43):DA(T43) DG(N-42):DC(T42) DT(N-41):DA(T41) DC(N-40):DG(T40) DT(N-39):DA(T39) DT(N-38):DA(T38) DT(N-32):DA(T32) DA(N-31):DT(T31) DA(N-30):DT(T30) DT(N-29):DA(T29) DC(N-28):DG(T28) DC(N-27):DG(T27) DC(N-26):DG(T26) DT(N-24):DA(T24) DT(N-23):DA(T23) DG(N-22):DC(T22) DG(N-21):DC(T21) DG(N-19):DC(T19) DG(N-18):DC(T18) DT(N-17):DA(T17) DT(N-16):DA(T16) DA(N-15):DT(T15) DA(N-14):DT(T14) DA(N-13):DT(T13) DA(N-12):DT(T12) DC(N-11):DG(T11) DG(N-10):DC(T10) DC(N-9):DG(T9) DG(N-8):DC(T8) DG(N-7):DC(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DA(N-3):DT(T3) DC(N-2):DG(T2) DA(N-1):DT(T1) DG(N0):DC(T0) DC(N1):DG(T-1) DG(N2):DC(T-2) DC(N3):DG(T-3) DG(N4):DC(T-4) DT(N5):DA(T-5) DA(N6):DT(T-6) DC(N7):DG(T-7) DG(N8):DC(T-8) DT(N9):DA(T-9) DG(N10):DC(T-10) DC(N11):DG(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DT(N14):DA(T-14) DT(N15):DA(T-15) DA(N16):DT(T-16) DA(N17):DT(T-17) DG(N18):DC(T-18) DC(N19):DG(T-19) DG(N20):DC(T-20) DG(N21):DC(T-21) DT(N22):DA(T-22) DG(N23):DC(T-23) DC(N24):DG(T-24) DT(N25):DA(T-25) DA(N26):DT(T-26) DG(N27):DC(T-27) DA(N28):DT(T-28) DG(N29):DC(T-29) DC(N30):DG(T-30) DT(N31):DA(T-31) DG(N32):DC(T-32) DT(N33):DA(T-33) DC(N34):DG(T-34) DT(N35):DA(T-35) DA(N36):DT(T-36) DC(N37):DG(T-37) DG(N38):DC(T-38) DA(N39):DT(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DA(N42):DT(T-42) DA(N43):DT(T-43) DT(N44):DA(T-44) DT(N45):DA(T-45) DG(N46):DC(T-46) DA(N47):DT(T-47) DG(N48):DC(T-48) DC(N49):DG(T-49) DG(N50):DC(T-50) DG(N51):DC(T-51) DC(N52):DG(T-52) DC(N53):DG(T-53) DT(N54):DA(T-54) DC(N55):DG(T-55) DG(N56):DC(T-56) DG(N57):DC(T-57) DC(N58):DG(T-58) DA(N59):DT(T-59) DC(N60):DG(T-60) DC(N61):DG(T-61) DG(N62):DC(T-62) DG(N63):DC(T-63) DG(N64):DC(T-64) DA(N65):DT(T-65) DT(N66):DA(T-66) DT(N67):DA(T-67) DC(N68):DG(T-68) DT(N69):DA(T-69) DG(N70):DC(T-70) DA(N71):DT(T-71) DT(N72):DA(T-72) chaine ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera >6iro_A:Histone-fold; title=THE CROSSLINKED COMPLEX OF ISWI-NUCLEOSOME IN THE ADP-BOUND STATE organism=XENOPUS LAEVIS DNA sequence DC(J2):DA(I146) DA(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >6is7_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF 9N-I DNA POLYMERASE INCORPORATION WITH DA IN THE ACTIVE SITE organism=THERMOCOCCUS SP. 9ON-7 DNA sequence DT(D3):DA(C2) DG(D4):DC(C1) DG(D5):DC(C0) DT(D6):DA(C-1) DA(D7):DT(C-2) DA(D8):DT(C-3) DG(D9):DC(C-4) DC(D10):DG(C-5) DA(D11):DT(C-6) DG(D12):DC(C-7) DT(D13):DA(C-8) DC(D14):DG(C-9) DC(D15):DG(C-10) DG(D16):DC(C-11) DC(D17):DG(C-12) chainA (494) TYR494 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (592) LYS592 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 (612) ARG612 0 0 2 9 3 0 0 0 0 0 0 0 0 0 0 prot.sequence mildtdyitengkpvirvfkkengefkieydrtfepyfyallkddsaiedvkkvtakrhgtvvkvkraekvqkkflgrpievwklyfnhpqdvpairdrirahpavvdiyeydipfakrylidkglipmegdeeltmlafaiatlyhegeefgtgpilmisyadgsearvitwkkidlpyvdvvstekemikrflrvvrekdpdvlityngdnfdfaylkkrceelgikftlgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgkpkekvyaeeiaqawesgeglervarysmedakvtyelgreffpmeaqlsrligqslwdvsrsstgnlvewfllrkaykrnelapnkpderelarrrggyaggyvkeperglwdnivyldfrslypsiiithnvspdtlnregckeydvapevghkfckdfpgfipsllgdlleerqkikrkmkatvdplekklldyrqrlikilansfYgyygyakarwyckecaesvtawgreyiemvireleekfgfkvlyadtdglhatipgadaetvkkkakeflkyinpklpglleleyegfyvrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleailkhgdveeavrivkevteklskyevppeklviheqitrdlrdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipadefdptkhrydaeyyienqvlpaverilkafgyrkedlry >6is8_AB: title=CRYSTAL STRUCTURE OF ZMMOC1 D115N MUTANT IN COMPLEX WITH HOLLIDAY JUNCTION organism=Zea mays DNA sequence DA(D1):DT(C33) DT(D2):DA(C32) DC(D3):DG(C31) DT(D4):DA(C30) DG(D5):DC(C29) DC(D6):DG(C28) DA(D7):DT(C27) DG(D8):DC(C26) DG(D9):DC(C25) DG(D10):DC(C24) DT(D11):DC(C22) DC(D12):DT(C21) DT(D13):DG(C20) DG(D14):DG(C19) DG(D15):DT(C18) DT(D17):DT(C17) DT(D18):DT(C16) DC(D19):DC(C15) DC(D20):DC(C14) DA(D21):DA(C13) DG(D22):DG(C12) DA(D23):DA(C11) DC(D24):DG(C10) DC(D25):DG(C9) DT(D26):DA(C8) DA(D27):DT(C7) DC(D28):DG(C6) DG(D29):DC(C5) DA(D30):DT(C4) DT(D31):DA(C3) DT(D32):DA(C2) DG(D33):DC(C1) chainA ( 36) SER144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 69) SER177 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 71) PHE179 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 17 44 0 0 0 0 0 0 0 0 ( 72) PRO180 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 25 0 0 0 0 0 0 0 ( 76) LYS184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 77) GLN185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 (106) GLN214 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 chainB ( 36) SER144 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLU145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 70) PRO178 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) PHE179 0 0 0 0 0 0 0 0 37 17 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 72) PRO180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 ( 74) ASP182 0 0 0 0 0 0 0 29 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LYS184 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) GLN185 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) GLN214 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gwvigvnpdiggaiavlspdgssqvfdnpfvhivvSevirkrldtksiiqllrgldappgttayieksSPFPtDgKQgwwstgfsyglwiaslvasgfsvvpiasQtwkayfglmrsetpkddsrqaasilfpdkdqslklkkhhgraealllaaygkglvlp/gwvigvnpdiggaiavlspdgssqvfdnpfvhivvSEvirkrldtksiiqllrgldappgttayieksSPFPtDgKQgwwstgfsyglwiaslvasgfsvvpiasQtwkayfglmrsetpkddsrqaasilfpdkdqslklkkhhgraealllaaygkglvlp >6is8_B: title=CRYSTAL STRUCTURE OF ZMMOC1 D115N MUTANT IN COMPLEX WITH HOLLIDAY JUNCTION organism=Zea mays DNA sequence DA(D1):DT(C33) DT(D2):DA(C32) DC(D3):DG(C31) DT(D4):DA(C30) DG(D5):DC(C29) DC(D6):DG(C28) DA(D7):DT(C27) DG(D8):DC(C26) DG(D9):DC(C25) DG(D10):DC(C24) DT(D11):DC(C22) DC(D12):DT(C21) DT(D13):DG(C20) DG(D14):DG(C19) DG(D15):DT(C18) DT(D17):DT(C17) DT(D18):DT(C16) DC(D19):DC(C15) DC(D20):DC(C14) DA(D21):DA(C13) DG(D22):DG(C12) DA(D23):DA(C11) DC(D24):DG(C10) DC(D25):DG(C9) DT(D26):DA(C8) DA(D27):DT(C7) DC(D28):DG(C6) DG(D29):DC(C5) DA(D30):DT(C4) DT(D31):DA(C3) DT(D32):DA(C2) DG(D33):DC(C1) chainB ( 36) SER144 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLU145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 70) PRO178 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) PHE179 0 0 0 0 0 0 0 0 37 17 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 72) PRO180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 ( 74) ASP182 0 0 0 0 0 0 0 29 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LYS184 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) GLN185 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) GLN214 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gwvigvnpdiggaiavlspdgssqvfdnpfvhivvSEvirkrldtksiiqllrgldappgttayieksSPFPtDgKQgwwstgfsyglwiaslvasgfsvvpiasQtwkayfglmrsetpkddsrqaasilfpdkdqslklkkhhgraealllaaygkglvlp >6isf_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF 9N-I DNA POLYMERASE INCORPORATION WITH DT IN THE ACTIVE SITE organism=Thermococcus sp. 9oN-7 DNA sequence DG(C-12):DC(D17) DC(C-11):DG(D16) DG(C-10):DC(D15) DG(C-9):DC(D14) DA(C-8):DT(D13) DC(C-7):DG(D12) DT(C-6):DA(D11) DG(C-5):DC(D10) DC(C-4):DG(D9) DT(C-3):DA(D8) DT(C-2):DA(D7) DA(C-1):DT(D6) DC(C0):DG(D5) DC(C1):DG(D4) DT(C2):DA(D3) chainA (494) TYR494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (592) LYS592 0 0 0 0 0 0 0 0 0 0 0 0 10 5 0 (612) ARG612 0 0 0 0 0 0 0 0 0 0 6 10 1 0 0 (614) ASP614 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mildtdyitengkpvirvfkkengefkieydrtfepyfyallkddsaiedvkkvtakrhgtvvkvkraekvqkkflgrpievwklyfnhpqdvpairdrirahpavvdiyeydipfakrylidkglipmegdeeltmlafaiatlyhegeefgtgpilmisyadgsearvitwkkidlpyvdvvstekemikrflrvvrekdpdvlityngdnfdfaylkkrceelgikftlgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgkpkekvyaeeiaqawesgeglervarysmedakvtyelgreffpmeaqlsrligqslwdvsrsstgnlvewfllrkaykrnelapnkpderelarrrggyaggyvkeperglwdnivyldfrslypsiiithnvspdtlnregckeydvapevghkfckdfpgfipsllgdlleerqkikrkmkatvdplekklldyrqrlikilansfYgyygyakarwyckecaesvtawgreyiemvireleekfgfkvlyadtdglhatipgadaetvkkkakeflkyinpklpglleleyegfyvrgffvtkKkyavideegkittrgleivRrDwseiaketqarvleailkhgdveeavrivkevteklskyevppeklviheqitrdlrdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipadefdptkhrydaeyyienqvlpaverilkafgyrkedlry >6isg_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF 9N-I DNA POLYMERASE INCORPORATION WITH DG IN THE ACTIVE SITE organism=Thermococcus sp. 9oN-7 DNA sequence DC(C-11):DG(D16) DG(C-10):DC(D15) DG(C-9):DC(D14) DA(C-8):DT(D13) DC(C-7):DG(D12) DT(C-6):DA(D11) DG(C-5):DC(D10) DC(C-4):DG(D9) DT(C-3):DA(D8) DT(C-2):DA(D7) DA(C-1):DT(D6) DC(C0):DG(D5) DC(C1):DG(D4) DG(C2):DC(D3) chainA (494) TYR494 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (592) LYS592 0 0 0 0 0 0 0 0 0 0 0 7 7 0 (612) ARG612 0 0 0 0 0 0 0 0 0 1 1 0 0 0 prot.sequence mildtdyitengkpvirvfkkengefkieydrtfepyfyallkddsaiedvkkvtakrhgtvvkvkraekvqkkflgrpievwklyfnhpqdvpairdrirahpavvdiyeydipfakrylidkglipmegdeeltmlafaiatlyhegeefgtgpilmisyadgsearvitwkkidlpyvdvvstekemikrflrvvrekdpdvlityngdnfdfaylkkrceelgikftlgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgkpkekvyaeeiaqawesgeglervarysmedakvtyelgreffpmeaqlsrligqslwdvsrsstgnlvewfllrkaykrnelapnkpderelarrrggyaggyvkeperglwdnivyldfrslypsiiithnvspdtlnregckeydvapevghkfckdfpgfipsllgdlleerqkikrkmkatvdplekklldyrqrlikilansfYgyygyakarwyckecaesvtawgreyiemvireleekfgfkvlyadtdglhatipgadaetvkkkakeflkyinpklpglleleyegfyvrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleailkhgdveeavrivkevteklskyevppeklviheqitrdlrdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipadefdptkhrydaeyyienqvlpaverilkafgyrked >6ish_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF 9N-I DNA POLYMERASE INCORPORATION WITH 3'-AL IN THE ACTIVE SITE organism=Thermococcus sp. 9oN-7 DNA sequence DC(C-11):DG(D16) DG(C-10):DC(D15) DG(C-9):DC(D14) DA(C-8):DT(D13) DC(C-7):DG(D12) DT(C-6):DA(D11) DG(C-5):DC(D10) DC(C-4):DG(D9) DT(C-3):DA(D8) DT(C-2):DA(D7) DA(C-1):DT(D6) DC(C0):DG(D5) DC(C1):DG(D4) chainA (592) LYS592 0 0 0 0 0 0 0 0 0 0 1 5 5 (612) ARG612 0 0 0 0 0 0 0 0 0 3 6 0 0 prot.sequence mildtdyitengkpvirvfkkengefkieydrtfepyfyallkddsaiedvkkvtakrhgtvvkvkraekvqkkflgrpievwklyfnhpqdvpairdrirahpavvdiyeydipfakrylidkglipmegdeeltmlafaiatlyhegeefgtgpilmisyadgsearvitwkkidlpyvdvvstekemikrflrvvrekdpdvlityngdnfdfaylkkrceelgikftlgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgkpkekvyaeeiaqawesgeglervarysmedakvtyelgreffpmeaqlsrligqslwdvsrsstgnlvewfllrkaykrnelapnkpderelarrrggyaggyvkeperglwdnivyldfrslypsiiithnvspdtlnregckeydvapevghkfckdfpgfipsllgdlleerqkikrkmkatvdplekklldyrqrlikilansfygyygyakarwyckecaesvtawgreyiemvireleekfgfkvlyadtdglhatipgadaetvkkkakeflkyinpklpglleleyegfyvrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleailkhgdveeavrivkevteklskyevppeklviheqitrdlrdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipadefdptkhrydaeyyienqvlpaverilkafgyrkedlry >6isi_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF 9N-I DNA POLYMERASE INCORPORATION WITH 3'-CL IN THE ACTIVE SITE organism=Thermococcus sp. 9oN-7 DNA sequence DG(C-10):DC(D15) DG(C-9):DC(D14) DA(C-8):DT(D13) DC(C-7):DG(D12) DT(C-6):DA(D11) DG(C-5):DC(D10) DC(C-4):DG(D9) DT(C-3):DA(D8) DT(C-2):DA(D7) DA(C-1):DT(D6) DC(C0):DG(D5) DC(C1):DG(D4) DC(C2):DG(D3) chainA (494) TYR494 0 0 0 0 0 0 0 0 0 0 0 0 1 (592) LYS592 0 0 0 0 0 0 0 0 0 0 7 7 0 (612) ARG612 0 0 0 0 0 0 0 0 2 5 0 0 0 (614) ASP614 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mildtdyitengkpvirvfkkengefkieydrtfepyfyallkddsaiedvkkvtakrhgtvvkvkraekvqkkflgrpievwklyfnhpqdvpairdrirahpavvdiyeydipfakrylidkglipmegdeeltmlafaiatlyhegeefgtgpilmisyadgsearvitwkkidlpyvdvvstekemikrflrvvrekdpdvlityngdnfdfaylkkrceelgikftlgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgkpkekvyaeeiaqawesgeglervarysmedakvtyelgreffpmeaqlsrligqslwdvsrsstgnlvewfllrkaykrnelapnkpderelarrrggyaggyvkeperglwdnivyldfrslypsiiithnvspdtlnregckeydvapevghkfckdfpgfipsllgdlleerqkikrkmkatvdplekklldyrqrlikilansfYgyygyakarwyckecaesvtawgreyiemvireleekfgfkvlyadtdglhatipgadaetvkkkakeflkyinpklpglleleyegfyvrgffvtkKkyavideegkittrgleivRrDwseiaketqarvleailkhgdveeavrivkevteklskyevppeklviheqitrdlrdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipadefdptkhrydaeyyienqvlpaverilkafgyrkedlry >6iy2_A:Histone-fold; title=STRUCTURE OF SNF2-MMTV-A NUCLEOSOME COMPLEX AT SHL2 IN ADP STATE organism=? DNA sequence DA(I1):DT(J147) DT(I2):DA(J146) DC(I3):DG(J145) DA(I4):DT(J144) DA(I5):DT(J143) DA(I6):DT(J142) DA(I7):DT(J141) DC(I8):DG(J140) DT(I9):DA(J139) DG(I10):DC(J138) DT(I11):DA(J137) DG(I12):DC(J136) DC(I13):DG(J135) DC(I14):DG(J134) DG(I15):DC(J133) DC(I16):DG(J132) DA(I17):DT(J131) DG(I18):DC(J130) DT(I19):DA(J129) DC(I20):DG(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DA(I26):DT(J122) DC(I27):DG(J121) DC(I28):DG(J120) DT(I29):DA(J119) DG(I30):DC(J118) DA(I31):DT(J117) DG(I32):DC(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DC(I38):DG(J110) DC(I39):DG(J109) DG(I40):DC(J108) DG(I41):DC(J107) DG(I42):DC(J106) DG(I43):DC(J105) DT(I44):DA(J104) DC(I45):DG(J103) DT(I46):DA(J102) DG(I47):DC(J101) DC(I48):DG(J100) DG(I49):DC(J99) DG(I50):DC(J98) DG(I51):DC(J97) DG(I52):DC(J96) DG(I53):DC(J95) DG(I54):DC(J94) DA(I55):DT(J93) DC(I56):DG(J92) DC(I57):DG(J91) DC(I58):DG(J90) DT(I59):DA(J89) DC(I60):DG(J88) DT(I61):DA(J87) DG(I62):DC(J86) DG(I63):DC(J85) DA(I64):DT(J84) DA(I65):DT(J83) DA(I66):DT(J82) DG(I67):DC(J81) DT(I68):DA(J80) DG(I69):DC(J79) DA(I70):DT(J78) DA(I71):DT(J77) DG(I72):DC(J76) DG(I73):DC(J75) DA(I74):DT(J74) DT(I75):DA(J73) DA(I76):DT(J72) DA(I77):DT(J71) DG(I78):DC(J70) DT(I79):DA(J69) DG(I80):DC(J68) DA(I81):DT(J67) DC(I82):DG(J66) DG(I83):DC(J65) DA(I84):DT(J64) DG(I85):DC(J63) DC(I86):DG(J62) DG(I87):DC(J61) DG(I88):DC(J60) DA(I89):DT(J59) DG(I90):DC(J58) DA(I91):DT(J57) DC(I92):DG(J56) DG(I93):DC(J55) DG(I94):DC(J54) DG(I95):DC(J53) DA(I96):DT(J52) DT(I97):DA(J51) DG(I98):DC(J50) DG(I99):DC(J49) DC(I100):DG(J48) DG(I101):DC(J47) DA(I102):DT(J46) DA(I103):DT(J45) DC(I104):DG(J44) DA(I105):DT(J43) DG(I106):DC(J42) DA(I107):DT(J41) DC(I108):DT(J39) DA(I109):DG(J38) DC(I110):DT(J37) DA(I112):DT(J36) DA(I113):DT(J35) DC(I114):DG(J34) DA(I115):DT(J33) DC(I116):DG(J32) DC(I118):DG(J30) DA(I119):DT(J28) DA(I120):DC(J27) DG(I121):DT(J26) DA(I122):DC(J25) DG(I123):DC(J24) DG(I124):DA(J23) DT(I125):DC(J22) DG(I126):DT(J21) DA(I127):DT(J20) DA(I128):DA(J19) DG(I130):DA(J17) DT(I131):DA(J16) DT(I132):DT(J15) DG(I134):DC(J13) DG(I135):DT(J12) DA(I136):DG(J11) DC(I137):DA(J10) DG(I139):DC(J9) DT(I140):DA(J8) DT(I141):DA(J7) DG(I142):DC(J6) DC(I143):DG(J5) DA(I144):DT(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainA ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirgera >6iy2_G:Histone-fold; title=STRUCTURE OF SNF2-MMTV-A NUCLEOSOME COMPLEX AT SHL2 IN ADP STATE organism=? DNA sequence DA(I1):DT(J147) DT(I2):DA(J146) DC(I3):DG(J145) DA(I4):DT(J144) DA(I5):DT(J143) DA(I6):DT(J142) DA(I7):DT(J141) DC(I8):DG(J140) DT(I9):DA(J139) DG(I10):DC(J138) DT(I11):DA(J137) DG(I12):DC(J136) DC(I13):DG(J135) DC(I14):DG(J134) DG(I15):DC(J133) DC(I16):DG(J132) DA(I17):DT(J131) DG(I18):DC(J130) DT(I19):DA(J129) DC(I20):DG(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DA(I26):DT(J122) DC(I27):DG(J121) DC(I28):DG(J120) DT(I29):DA(J119) DG(I30):DC(J118) DA(I31):DT(J117) DG(I32):DC(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DC(I38):DG(J110) DC(I39):DG(J109) DG(I40):DC(J108) DG(I41):DC(J107) DG(I42):DC(J106) DG(I43):DC(J105) DT(I44):DA(J104) DC(I45):DG(J103) DT(I46):DA(J102) DG(I47):DC(J101) DC(I48):DG(J100) DG(I49):DC(J99) DG(I50):DC(J98) DG(I51):DC(J97) DG(I52):DC(J96) DG(I53):DC(J95) DG(I54):DC(J94) DA(I55):DT(J93) DC(I56):DG(J92) DC(I57):DG(J91) DC(I58):DG(J90) DT(I59):DA(J89) DC(I60):DG(J88) DT(I61):DA(J87) DG(I62):DC(J86) DG(I63):DC(J85) DA(I64):DT(J84) DA(I65):DT(J83) DA(I66):DT(J82) DG(I67):DC(J81) DT(I68):DA(J80) DG(I69):DC(J79) DA(I70):DT(J78) DA(I71):DT(J77) DG(I72):DC(J76) DG(I73):DC(J75) DA(I74):DT(J74) DT(I75):DA(J73) DA(I76):DT(J72) DA(I77):DT(J71) DG(I78):DC(J70) DT(I79):DA(J69) DG(I80):DC(J68) DA(I81):DT(J67) DC(I82):DG(J66) DG(I83):DC(J65) DA(I84):DT(J64) DG(I85):DC(J63) DC(I86):DG(J62) DG(I87):DC(J61) DG(I88):DC(J60) DA(I89):DT(J59) DG(I90):DC(J58) DA(I91):DT(J57) DC(I92):DG(J56) DG(I93):DC(J55) DG(I94):DC(J54) DG(I95):DC(J53) DA(I96):DT(J52) DT(I97):DA(J51) DG(I98):DC(J50) DG(I99):DC(J49) DC(I100):DG(J48) DG(I101):DC(J47) DA(I102):DT(J46) DA(I103):DT(J45) DC(I104):DG(J44) DA(I105):DT(J43) DG(I106):DC(J42) DA(I107):DT(J41) DC(I108):DT(J39) DA(I109):DG(J38) DC(I110):DT(J37) DA(I112):DT(J36) DA(I113):DT(J35) DC(I114):DG(J34) DA(I115):DT(J33) DC(I116):DG(J32) DC(I118):DG(J30) DA(I119):DT(J28) DA(I120):DC(J27) DG(I121):DT(J26) DA(I122):DC(J25) DG(I123):DC(J24) DG(I124):DA(J23) DT(I125):DC(J22) DG(I126):DT(J21) DA(I127):DT(J20) DA(I128):DA(J19) DG(I130):DA(J17) DT(I131):DA(J16) DT(I132):DT(J15) DG(I134):DC(J13) DG(I135):DT(J12) DA(I136):DG(J11) DC(I137):DA(J10) DG(I139):DC(J9) DT(I140):DA(J8) DT(I141):DA(J7) DG(I142):DC(J6) DC(I143):DG(J5) DA(I144):DT(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainG ( 5) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktraKaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk >6iy3_D:Histone-fold; title=STRUCTURE OF SNF2-MMTV-A NUCLEOSOME COMPLEX AT SHL-2 IN ADP STATE organism=? DNA sequence DA(I1):DT(J147) DT(I2):DA(J146) DC(I3):DG(J145) DA(I4):DT(J144) DA(I5):DT(J143) DA(I6):DT(J142) DA(I7):DT(J141) DC(I8):DG(J140) DT(I9):DA(J139) DG(I10):DC(J138) DT(I11):DA(J137) DG(I12):DC(J136) DC(I13):DG(J135) DC(I14):DG(J134) DG(I15):DC(J133) DC(I16):DG(J132) DA(I17):DT(J131) DG(I18):DC(J130) DT(I19):DA(J129) DC(I20):DG(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DA(I26):DT(J122) DC(I27):DG(J121) DC(I28):DG(J120) DT(I29):DA(J119) DG(I30):DC(J118) DA(I31):DT(J117) DG(I32):DC(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DC(I38):DG(J110) DC(I39):DG(J109) DG(I40):DC(J108) DG(I41):DC(J107) DG(I42):DC(J106) DG(I43):DC(J105) DT(I44):DA(J104) DC(I45):DG(J103) DT(I46):DA(J102) DG(I47):DC(J101) DC(I48):DG(J100) DG(I49):DC(J99) DG(I50):DC(J98) DG(I51):DC(J97) DG(I52):DC(J96) DG(I53):DC(J95) DG(I54):DC(J94) DA(I55):DT(J93) DC(I56):DG(J92) DC(I57):DG(J91) DC(I58):DG(J90) DT(I59):DA(J89) DC(I60):DG(J88) DT(I61):DA(J87) DG(I62):DC(J86) DG(I63):DC(J85) DA(I64):DT(J84) DA(I65):DT(J83) DA(I66):DT(J82) DG(I67):DC(J81) DT(I68):DA(J80) DG(I69):DC(J79) DA(I70):DT(J78) DA(I71):DT(J77) DG(I72):DC(J76) DG(I73):DC(J75) DA(I74):DT(J74) DT(I75):DA(J73) DA(I76):DT(J72) DA(I77):DT(J71) DG(I78):DC(J70) DT(I79):DA(J69) DG(I80):DC(J68) DA(I81):DT(J67) DC(I82):DG(J66) DG(I83):DC(J65) DA(I84):DT(J64) DG(I85):DC(J63) DC(I86):DG(J62) DG(I87):DC(J61) DG(I88):DC(J60) DA(I89):DT(J59) DG(I90):DC(J58) DA(I91):DT(J57) DC(I92):DG(J56) DG(I93):DC(J55) DG(I94):DC(J54) DG(I95):DC(J53) DA(I96):DT(J52) DT(I97):DA(J51) DG(I98):DC(J50) DG(I99):DC(J49) DC(I100):DG(J48) DG(I101):DC(J47) DA(I102):DT(J46) DA(I103):DT(J45) DC(I104):DG(J44) DA(I105):DT(J43) DG(I106):DC(J42) DA(I107):DT(J41) DC(I108):DG(J40) DA(I109):DT(J39) DC(I110):DG(J38) DA(I111):DT(J37) DA(I112):DT(J36) DA(I113):DT(J35) DC(I114):DG(J34) DA(I115):DT(J33) DC(I116):DG(J32) DA(I117):DT(J31) DC(I118):DG(J30) DA(I119):DT(J29) DA(I120):DT(J28) DG(I121):DC(J27) DA(I122):DT(J26) DG(I123):DC(J25) DG(I124):DC(J24) DT(I125):DA(J23) DG(I126):DC(J22) DA(I127):DT(J21) DA(I128):DT(J20) DT(I129):DA(J19) DG(I130):DC(J18) DT(I131):DA(J17) DT(I132):DA(J16) DA(I133):DT(J15) DG(I134):DC(J14) DG(I135):DC(J13) DA(I136):DT(J12) DC(I137):DG(J11) DT(I138):DA(J10) DG(I139):DC(J9) DT(I140):DA(J8) DT(I141):DA(J7) DG(I142):DC(J6) DC(I143):DG(J5) DA(I144):DT(J4) DG(I145):DC(J3) DT(I147):DA(J1) chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krrktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6j4e_B:WRKY_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ATWRKY1 DOMAIN organism=Arabidopsis thaliana DNA sequence DC(D2):DG(C15) DG(D3):DC(C14) DC(D4):DG(C13) DT(D5):DA(C12) DG(D6):DC(C11) DG(D7):DC(C10) DT(D8):DA(C9) DC(D9):DG(C8) DA(D10):DT(C7) DA(D11):DT(C6) DA(D12):DT(C5) DG(D13):DC(C4) DG(D14):DC(C3) DC(D15):DG(C2) chainB ( 9) ARG117 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 10) LYS118 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 13) GLN121 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 14) LYS122 0 0 0 0 8 12 5 0 0 0 0 0 0 0 ( 25) TYR133 0 0 0 0 0 1 6 0 0 0 0 0 0 0 prot.sequence vmedgynwRKygQKlvkgnefvrsYyrcthpnckakkqlersaggqvvdtvyfgehdhpkp >6j4f_F:WRKY_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ATWRKY2 DOMAIN organism=Arabidopsis thaliana DNA sequence DG(G2):DC(H15) DC(G3):DG(H14) DC(G4):DG(H13) DT(G5):DA(H12) DT(G6):DA(H11) DT(G7):DA(H10) DG(G8):DC(H9) DA(G9):DT(H8) DC(G10):DG(H7) DC(G11):DG(H6) DA(G12):DT(H5) DG(G13):DC(H4) DC(G14):DG(H3) DG(G15):DC(H2) chainF ( 10) ARG279 0 0 7 5 0 0 0 0 0 0 0 0 0 0 ( 11) LYS280 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 12) TYR281 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 14) GLN283 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 15) LYS284 0 0 0 0 0 0 0 5 18 9 0 0 0 0 ( 26) TYR295 0 0 0 0 0 0 0 5 1 0 0 0 0 0 prot.sequence apaedgynwRKYgQKlvkgseyprsYykctnpncqvkkkversreghiteiiykgahnhlkpl >6j4g_B:WRKY_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ATWRKY33 DOMAIN organism=Arabidopsis thaliana DNA sequence DC(D2):DG(C15) DG(D3):DC(C14) DC(D4):DG(C13) DT(D5):DA(C12) DG(D6):DC(C11) DG(D7):DC(C10) DT(D8):DA(C9) DC(D9):DG(C8) DA(D10):DT(C7) DA(D11):DT(C6) DA(D12):DT(C5) DG(D13):DC(C4) DG(D14):DC(C3) DC(D15):DG(C2) chainB ( 6) ARG190 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 7) LYS191 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 10) GLN194 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 11) LYS195 0 0 0 0 7 15 6 0 0 0 0 0 0 0 ( 22) TYR206 0 0 0 0 0 2 6 0 0 0 0 0 0 0 prot.sequence dgynwRKygQKqvkgsenprsYykctfpncptkkkverslegqiteivykgshnhpkp >6j4r_AD:Homeodomain-like; title=STRUCTURAL BASIS FOR THE TARGET DNA RECOGNITION AND BINDING BY THE MYB DOMAIN OF PHOSPHATE STARVATION RESPONSE REGULATOR 1 organism=Arabidopsis thaliana DNA sequence DC(F1):DG(E11) DC(F2):DG(E10) DA(F3):DT(E9) DT(F4):DA(E8) DA(F5):DT(E7) DT(F6):DA(E6) DA(F7):DT(E5) DT(F8):DA(E4) DG(F9):DC(E3) DA(F10):DT(E2) DC(F11):DG(E1) chainA ( 3) ARG227 0 0 0 0 0 0 3 4 1 0 0 ( 47) LYS271 0 4 11 8 0 0 0 0 0 0 0 ( 48) SER272 0 0 0 0 0 6 2 0 0 0 0 ( 51) GLN275 0 0 0 14 8 1 0 0 0 0 0 ( 52) LYS276 0 0 0 0 0 0 2 0 0 0 0 chainD ( 3) ARG227 0 0 0 2 7 1 0 0 0 0 0 ( 47) LYS271 0 0 0 0 0 0 0 0 5 12 0 ( 48) SER272 0 0 0 0 0 2 6 0 0 0 0 ( 51) GLN275 0 0 0 0 0 0 1 10 11 0 0 prot.sequence kaRmrwtpelheafveavnslggseratpkgvlkimkvegltiyhvKShlQKyrtary/kaRmrwtpelheafveavnslggseratpkgvlkimkvegltiyhvKShlQkyrtar >6j4r_BC:Homeodomain-like; title=STRUCTURAL BASIS FOR THE TARGET DNA RECOGNITION AND BINDING BY THE MYB DOMAIN OF PHOSPHATE STARVATION RESPONSE REGULATOR 1 organism=Arabidopsis thaliana DNA sequence DC(Y1):DG(X11) DA(Y2):DT(X10) DG(Y3):DC(X9) DT(Y4):DA(X8) DA(Y5):DT(X7) DT(Y6):DA(X6) DA(Y7):DT(X5) DT(Y8):DA(X4) DA(Y9):DT(X3) DC(Y10):DG(X2) DC(Y11):DG(X1) chainB ( 2) ARG227 0 0 0 4 5 4 0 0 0 0 0 ( 43) TYR268 0 0 0 0 0 0 0 1 0 0 0 ( 46) LYS271 0 0 0 0 0 0 0 0 4 8 5 ( 47) SER272 0 0 0 0 0 1 6 2 0 0 0 ( 50) GLN275 0 0 0 0 0 0 1 8 14 0 0 ( 51) LYS276 0 0 0 0 0 1 0 0 0 0 0 chainC ( 2) ARG227 0 0 0 0 0 0 1 4 4 0 0 ( 46) LYS271 0 1 10 6 0 0 0 0 0 0 0 ( 47) SER272 0 0 0 0 0 6 3 0 0 0 0 ( 50) GLN275 0 0 0 15 10 1 0 0 0 0 0 ( 51) LYS276 0 0 0 0 0 0 2 0 0 0 0 prot.sequence aRmrwtpelheafveavnslggseratpkgvlkimkvegltiYhvKShlQKyrtary/aRmrwtpelheafveavnslggseratpkgvlkimkvegltiyhvKShlQKyrta >6j4r_D:Homeodomain-like; title=STRUCTURAL BASIS FOR THE TARGET DNA RECOGNITION AND BINDING BY THE MYB DOMAIN OF PHOSPHATE STARVATION RESPONSE REGULATOR 1 organism=Arabidopsis thaliana DNA sequence DG(E1):DC(F11) DT(E2):DA(F10) DC(E3):DG(F9) DA(E4):DT(F8) DT(E5):DA(F7) DA(E6):DT(F6) DT(E7):DA(F5) DA(E8):DT(F4) DT(E9):DA(F3) DG(E10):DC(F2) DG(E11):DC(F1) chainD ( 3) ARG227 0 0 0 0 0 1 7 2 0 0 0 ( 47) LYS271 0 12 5 0 0 0 0 0 0 0 0 ( 48) SER272 0 0 0 0 6 2 0 0 0 0 0 ( 51) GLN275 0 0 11 10 1 0 0 0 0 0 0 prot.sequence kaRmrwtpelheafveavnslggseratpkgvlkimkvegltiyhvKShlQkyrtar >6j4w_e:Histone-fold; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH ELF1 AND SPT4/5, STALLED AT SHL(-5) OF THE NUCLEOSOME organism=HOMO SAPIENS DNA sequence DA(T-72):DT(N72) DT(T-71):DA(N71) DC(T-70):DG(N70) DA(T-69):DT(N69) DG(T-68):DC(N68) DA(T-67):DT(N67) DA(T-66):DT(N66) DT(T-65):DA(N65) DC(T-64):DG(N64) DC(T-63):DG(N63) DC(T-62):DG(N62) DG(T-61):DC(N61) DG(T-60):DC(N60) DT(T-59):DA(N59) DG(T-58):DC(N58) DC(T-57):DG(N57) DC(T-56):DG(N56) DG(T-55):DC(N55) DA(T-54):DT(N54) DG(T-53):DC(N53) DG(T-52):DC(N52) DC(T-51):DG(N51) DC(T-50):DG(N50) DG(T-49):DC(N49) DC(T-48):DG(N48) DT(T-47):DA(N47) DC(T-46):DG(N46) DA(T-45):DT(N45) DA(T-44):DT(N44) DT(T-43):DA(N43) DT(T-42):DA(N42) DG(T-41):DC(N41) DG(T-40):DC(N40) DT(T-39):DA(N39) DC(T-38):DG(N38) DG(T-37):DC(N37) DT(T-36):DA(N36) DA(T-35):DT(N35) DG(T-34):DC(N34) DA(T-33):DT(N33) DC(T-32):DG(N32) DA(T-31):DT(N31) DG(T-30):DC(N30) DC(T-29):DG(N29) DT(T-28):DA(N28) DC(T-27):DG(N27) DT(T-26):DA(N26) DA(T-25):DT(N25) DG(T-24):DC(N24) DC(T-23):DG(N23) DA(T-22):DT(N22) DC(T-21):DG(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DT(T-17):DA(N17) DT(T-16):DA(N16) DA(T-15):DT(N15) DA(T-14):DT(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DG(T-11):DC(N11) DC(T-10):DG(N10) DA(T-9):DT(N9) DC(T-8):DG(N8) DG(T-7):DC(N7) DT(T-6):DA(N6) DA(T-5):DT(N5) DC(T-4):DG(N4) DG(T-3):DC(N3) DC(T-2):DG(N2) DG(T-1):DC(N1) DC(T0):DG(N0) DT(T1):DA(N-1) DG(T2):DC(N-2) DT(T3):DA(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DC(T7):DG(N-7) DC(T8):DG(N-8) DG(T9):DC(N-9) DC(T10):DG(N-10) DG(T11):DC(N-11) DT(T12):DA(N-12) DT(T13):DA(N-13) DT(T14):DA(N-14) DT(T15):DA(N-15) DA(T16):DT(N-16) DA(T17):DT(N-17) DC(T18):DG(N-18) DC(T19):DG(N-19) DG(T20):DC(N-20) DC(T21):DG(N-21) DC(T22):DG(N-22) DA(T23):DT(N-23) DA(T24):DT(N-24) DG(T25):DC(N-25) DG(T26):DC(N-26) DG(T27):DC(N-27) DG(T28):DC(N-28) DA(T29):DT(N-29) DT(T30):DA(N-30) DT(T31):DA(N-31) DA(T32):DT(N-32) DC(T33):DG(N-33) DA(T34):DT(N-34) DC(T35):DG(N-35) DC(T36):DG(N-36) DC(T37):DG(N-37) DA(T38):DT(N-38) DA(T39):DT(N-39) DG(T40):DC(N-40) DA(T41):DT(N-41) DC(T42):DG(N-42) DA(T43):DT(N-43) DC(T44):DG(N-44) DC(T45):DG(N-45) DA(T46):DT(N-46) DG(T47):DC(N-47) DG(T48):DC(N-48) DC(T49):DG(N-49) DA(T50):DT(N-50) DC(T51):DG(N-51) DG(T52):DC(N-52) DA(T53):DT(N-53) DG(T54):DC(N-54) DA(T55):DT(N-55) DC(T56):DG(N-56) DA(T57):DT(N-57) DG(T58):DC(N-58) DA(T59):DT(N-59) DA(T60):DT(N-60) DA(T61):DT(N-61) DA(T62):DT(N-62) DA(T63):DT(N-63) DA(T64):DT(N-64) DA(T65):DT(N-65) DC(T66):DG(N-66) DA(T67):DT(N-68) DC(T69):DG(N-69) DG(T70):DC(N-70) DA(T71):DT(N-71) DA(T72):DT(N-72) DA(T74):DT(N-74) DC(T75):DG(N-81) DG(T76):DG(N-82) DG(T77):DT(N-83) DC(T78):DG(N-84) DC(T79):DG(N-85) DA(T80):DG(N-86) DC(T81):DT(N-87) DC(T82):DT(N-88) DA(T83):DT(N-89) DC(T84):DG(N-90) DC(T85):DT(N-91) DC(T86):DG(N-92) DA(T87):DT(N-93) DA(T88):DG(N-94) DA(T89):DG(N-95) DC(T90):DT(N-96) DA(T91):DT(N-97) DC(T92):DT(N-98) chaine ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera >6j4x_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH ELF1 AND SPT4/5, STALLED AT SHL(-1) OF THE NUCLEOSOME (+1A) organism=? DNA sequence DC(N-54):DG(T54) DT(N-53):DA(T53) DC(N-52):DG(T52) DG(N-51):DC(T51) DT(N-50):DA(T50) DG(N-49):DC(T49) DC(N-48):DG(T48) DC(N-47):DG(T47) DT(N-46):DA(T46) DG(N-45):DC(T45) DG(N-44):DC(T44) DT(N-43):DA(T43) DG(N-42):DC(T42) DT(N-41):DA(T41) DC(N-40):DG(T40) DT(N-39):DA(T39) DT(N-38):DA(T38) DG(N-37):DC(T37) DA(N-31):DC(T36) DA(N-30):DT(T30) DT(N-29):DA(T29) DC(N-28):DG(T28) DC(N-27):DG(T27) DC(N-26):DG(T26) DC(N-25):DG(T25) DT(N-24):DA(T24) DT(N-23):DA(T23) DG(N-22):DC(T22) DC(N-20):DG(T20) DG(N-19):DC(T19) DG(N-18):DC(T18) DT(N-17):DA(T17) DT(N-16):DA(T16) DA(N-15):DT(T15) DA(N-14):DT(T14) DA(N-13):DT(T13) DA(N-12):DT(T12) DC(N-11):DG(T11) DG(N-10):DC(T10) DC(N-9):DG(T9) DG(N-8):DC(T8) DG(N-7):DC(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DA(N-3):DT(T3) DC(N-2):DG(T2) DA(N-1):DT(T1) DG(N0):DC(T0) DC(N1):DG(T-1) DG(N2):DC(T-2) DC(N3):DG(T-3) DG(N4):DC(T-4) DT(N5):DA(T-5) DA(N6):DT(T-6) DC(N7):DG(T-7) DG(N8):DC(T-8) DT(N9):DA(T-9) DG(N10):DC(T-10) DC(N11):DG(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DT(N14):DA(T-14) DT(N15):DA(T-15) DA(N16):DT(T-16) DA(N17):DT(T-17) DG(N18):DC(T-18) DC(N19):DG(T-19) DG(N20):DC(T-20) DG(N21):DC(T-21) DT(N22):DA(T-22) DG(N23):DC(T-23) DC(N24):DG(T-24) DT(N25):DA(T-25) DA(N26):DT(T-26) DG(N27):DC(T-27) DA(N28):DT(T-28) DG(N29):DC(T-29) DC(N30):DG(T-30) DT(N31):DA(T-31) DG(N32):DC(T-32) DT(N33):DA(T-33) DC(N34):DG(T-34) DT(N35):DA(T-35) DA(N36):DT(T-36) DC(N37):DG(T-37) DG(N38):DC(T-38) DA(N39):DT(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DA(N42):DT(T-42) DA(N43):DT(T-43) DT(N44):DA(T-44) DT(N45):DA(T-45) DG(N46):DC(T-46) DA(N47):DT(T-47) DG(N48):DC(T-48) DC(N49):DG(T-49) DG(N50):DC(T-50) DG(N51):DC(T-51) DC(N52):DG(T-52) DC(N53):DG(T-53) DT(N54):DA(T-54) DC(N55):DG(T-55) DG(N56):DC(T-56) DG(N57):DC(T-57) DC(N58):DG(T-58) DA(N59):DT(T-59) DC(N60):DG(T-60) DC(N61):DG(T-61) DG(N62):DC(T-62) DG(N63):DC(T-63) DG(N64):DC(T-64) DA(N65):DT(T-65) DT(N66):DA(T-66) DT(N67):DA(T-67) DC(N68):DG(T-68) DT(N69):DA(T-69) DG(N70):DC(T-70) DA(N71):DT(T-71) DT(N72):DA(T-72) chainA (303) LYS318 0 0 0 0 0 0 0 0 0 0 0 0 54 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1337) ARG1389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sqfpyssaplrsvkevqfgllspeeiraisvvkieypeimdesrqrpregglndpklgsidrnfkcqtcgegmaecpghfghmelakpvfhigfipkikkvcecicmncgkllldetnptmaqairirdpkkrfnavwqlcktkmvceadapsrggcgntqpvvrkdgmklwgtwkksrdaqperklltpgeilnvfkhispedcfrlgfnedyarpewmiitvlpvpppqvrpsiamdettqgqddlthklsdilkaninvqklemdgspqhiineveqllqfhvatymdndiagqpqalqKsgrpvkairarlkgkegrlrgnlmgkrvdfsartvisgdpnleldqvgvpisiaktlsypetvtqynihrlteyvrngpnehpgakyvirdngdridlryhkragdivlqygwkverhlmdddpvlfnrqpslhkmsmmahrvkvmpystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpvmgivqdtlcgvrkmtlrdtfieyeqvmnmlfwvpswdgvvpqpailkpkplwtgkqllsiaipsgihlqrtdggnsllspkdngmlivdgkvmfgvvdkktvgsgggglihtvmrekgpkicaelfgniqkvvnywllhngfsigigdaiadastmkeithaissakeqvqeiiykaqhnelelkpgmtlresfegevsrtlndardsagrsaemnlkdlnnvkqmvsagskgsfiniaqmsacvgqqmvegkriafgfadrslphftkddfspeskgfvensylrgltpqefffhamagreglidtavktaetgyiqrrlvkaledimvhydgttrnslgdiiqflygedgldgtqverqtidtipgsdkafhkryyvdlmdeknsikpdvieyaadilgdvelqkelnseyeqlvsdrkflreivfvngdhnwplpvnlrriiqnaqqifhldrakasdltipeiihgvrdlckklfvlrgenelikeaqqnatslfqclvrarlatrrileefrlnrdafewvlgtieaqfqrslvhpgemvgviaaqsigepatqmnvtlgvprlkeilnvakniktpaltvyldreialdiekakviqssieyttlknvtsateiyydpdptstvieedfdtveayfsqspwllrleldrarmldkqltmnqvadkisevfsddlfvmwsednadkliircrvieedqmlkrieahmldlialrgipgiskvymvkhkvsvpdesgeykneelwaletdginlaevmavpgvdssrtysnsfveilsvlgieatrsslykeilnviafdgsyvnyrhmallvdvmtsrgylmaitRhginradtgalmrcsfeetveilfeagaaaelddcrgvsenvmlgqlapmgtgafdvmideklltslpadyapt >6j4z_gh:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH SPT4/5 AND FOREIGN DNA, STALLED AT SHL(-1) OF THE NUCLEOSOME organism=HOMO SAPIENS DNA sequence DG(025):DC(1-25) DG(026):DC(1-26) DG(027):DC(1-27) DG(028):DC(1-28) DA(029):DT(1-29) DT(030):DA(1-30) DT(031):DA(1-31) DA(032):DT(1-32) DC(033):DG(1-33) DA(034):DT(1-34) DC(035):DG(1-35) DC(036):DG(1-36) DC(037):DG(1-37) DA(038):DT(1-38) DA(039):DT(1-39) DG(040):DC(1-40) DA(041):DT(1-41) DC(042):DG(1-42) DA(043):DT(1-43) DC(044):DG(1-44) DC(045):DG(1-45) DA(046):DT(1-46) DG(047):DC(1-47) DG(048):DC(1-48) DC(049):DG(1-49) DA(050):DT(1-50) DC(051):DG(1-51) DG(052):DC(1-52) DA(053):DT(1-53) DG(054):DC(1-54) DA(055):DT(1-55) DC(056):DG(1-56) DA(057):DT(1-57) DG(058):DC(1-58) DA(060):DT(1-59) DA(061):DT(1-61) DA(062):DT(1-62) DA(063):DT(1-63) DA(064):DT(1-64) DA(065):DT(1-65) DC(066):DG(1-66) chaing ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 chainh prot.sequence aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtAvrlllpgelakhavsegtkavtkytsa >6j50_BEbc:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH SPT4/5 AND FOREIGN DNA, STALLED AT SHL(-1) OF THE NUCLEOSOME (TILTED CONFORMATION) organism=HOMO SAPIENS DNA sequence DT(N-55):DA(T55) DC(N-54):DG(T54) DT(N-53):DA(T53) DC(N-52):DG(T52) DG(N-51):DC(T51) DT(N-50):DA(T50) DG(N-49):DC(T49) DC(N-48):DG(T48) DC(N-47):DG(T47) DT(N-46):DA(T46) DG(N-45):DC(T45) DG(N-44):DC(T44) DT(N-43):DA(T43) DG(N-42):DC(T42) DT(N-41):DA(T41) DC(N-40):DG(T40) DT(N-39):DA(T39) DT(N-38):DA(T38) DT(N-32):DA(T32) DA(N-31):DT(T31) DA(N-30):DT(T30) DT(N-29):DA(T29) DC(N-28):DG(T28) DC(N-27):DG(T27) DC(N-26):DG(T26) DC(N-25):DG(T25) DT(N-24):DA(T24) DT(N-23):DA(T23) DG(N-22):DC(T22) DG(N-21):DC(T21) DC(N-20):DG(T20) DG(N-19):DC(T19) DG(N-18):DC(T18) DT(N-17):DA(T17) DT(N-16):DA(T16) DA(N-15):DT(T15) DA(N-14):DT(T14) DA(N-13):DT(T13) DA(N-12):DT(T12) DC(N-11):DG(T11) DG(N-10):DC(T10) DC(N-9):DG(T9) DG(N-8):DC(T8) DG(N-7):DC(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DA(N-3):DT(T3) DC(N-2):DG(T2) DA(N-1):DT(T1) DG(N0):DC(T0) DC(N1):DG(T-1) DG(N2):DC(T-2) DC(N3):DG(T-3) DG(N4):DC(T-4) DT(N5):DA(T-5) DA(N6):DT(T-6) DC(N7):DG(T-7) DG(N8):DC(T-8) DT(N9):DA(T-9) DG(N10):DC(T-10) DC(N11):DG(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DT(N14):DA(T-14) DT(N15):DA(T-15) DA(N16):DT(T-16) DA(N17):DT(T-17) DG(N18):DC(T-18) DC(N19):DG(T-19) DG(N20):DC(T-20) DG(N21):DC(T-21) DT(N22):DA(T-22) DG(N23):DC(T-23) DC(N24):DG(T-24) DT(N25):DA(T-25) DA(N26):DT(T-26) DG(N27):DC(T-27) DA(N28):DT(T-28) DG(N29):DC(T-29) DC(N30):DG(T-30) DT(N31):DA(T-31) DG(N32):DC(T-32) DT(N33):DA(T-33) DC(N34):DG(T-34) DT(N35):DA(T-35) DA(N36):DT(T-36) DC(N37):DG(T-37) DG(N38):DC(T-38) DA(N39):DT(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DA(N42):DT(T-42) DA(N43):DT(T-43) DT(N44):DA(T-44) DT(N45):DA(T-45) DG(N46):DC(T-46) DA(N47):DT(T-47) DG(N48):DC(T-48) DC(N49):DG(T-49) DG(N50):DC(T-50) DG(N51):DC(T-51) DC(N52):DG(T-52) DC(N53):DG(T-53) DT(N54):DA(T-54) DC(N55):DG(T-55) DG(N56):DC(T-56) DG(N57):DC(T-57) DC(N58):DG(T-58) DA(N59):DT(T-59) DC(N60):DG(T-60) DC(N61):DG(T-61) DG(N62):DC(T-62) DG(N63):DC(T-63) DG(N64):DC(T-64) DA(N65):DT(T-65) DT(N66):DA(T-66) DT(N67):DA(T-67) DC(N68):DG(T-68) DT(N69):DA(T-69) DG(N70):DC(T-70) DA(N71):DT(T-71) DT(N72):DA(T-72) chainB (383) ARG419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (427) LYS463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (428) LYS464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (462) ASP498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (464) LYS500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainb chainc ( 62) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ddtittedcwtvisaffeekglvsqqldsfdefmetsiqdlvweeprlildqpaqhdninkryeirfgkiylsrptmteadgtthamfpqearlrnltysspvyldmeksmftsidgnkvhigkvpimlrskfcslrtldevdlykmkecpydmggyfvingsekvliaqersaanivqvfkkaapspishvaeirsalekgsrlistmqiklygredkgtgrtikatlpyvkqdipivivfralgvvpdgeilqhicydendwqmlemlkpcieegfviqdkevaldfigrrgsaalgirrekriqyakdilqkellphitqeegfetrktfflgymvnrlllcalerkdqddrdhfgkkrldlagpllanlfrilfrkltReiyrymqrcietdrdfnlnlavksttitsglkyslatgnwgeqKKamssragvsqvlnrytysstlshlrrtntpigrDgKlakprqlhnthwglvcpaetpegqacglvknlsllsgisigspsepiinfleewgmepledydpaqhtkstrifvngvwtgihrdpsmlvstmrdlrrsgaispevsiirdirerefkiftdvgrvyrplfiveddeskdnkgelritkehirkiqqgydddvygwsslvtsgvieyvdgeeeetimiamtpedlqtrslndtakrikpemstsshhtfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplaktqameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekrfgisiveefekptrattlrlkhgtyekldedgliapgvrvsgddiiigkttpippyhtkrdastplrstengivdqvllttnqeglkfvkvrmrttkvpqigdkfasrhgqkgtigvtyrhedmpfsaegivpdliinphaipsrmtvahliecllskvgsirgyegdatpftdltvdavsnllrdngyqsrgfevmynghtgkklmaqvffgptyyqrlrhmvddkiharargpvqvltrqpvegrsrdgglrfgemerdcmiahgaagflkerlmeasdafrvhvcgicglmsvianlkknqfecrscknktniyqlhipyaakllfqelmamniaprlytersg/ednnriisrlwrsfrtvkemaadrgyfisqeemdqsleefrskicdsmgnpqrklmsflanptpealekysdlgtlwvefcdepsvgiktmrnfclriqeknfstgifiyqnnitpsankmiptvspaiietfqesdlvvnithhelvpkhirlsdgeksqllqryklkesqlpriqredpvarylglkrgqvvkiirrsetsgryasyricl/rdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >6j50_adef:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH SPT4/5 AND FOREIGN DNA, STALLED AT SHL(-1) OF THE NUCLEOSOME (TILTED CONFORMATION) organism=HOMO SAPIENS DNA sequence DA(T-72):DT(N72) DT(T-71):DA(N71) DC(T-70):DG(N70) DA(T-69):DT(N69) DG(T-68):DC(N68) DA(T-67):DT(N67) DA(T-66):DT(N66) DT(T-65):DA(N65) DC(T-64):DG(N64) DC(T-63):DG(N63) DC(T-62):DG(N62) DG(T-61):DC(N61) DG(T-60):DC(N60) DT(T-59):DA(N59) DG(T-58):DC(N58) DC(T-57):DG(N57) DC(T-56):DG(N56) DG(T-55):DC(N55) DA(T-54):DT(N54) DG(T-53):DC(N53) DG(T-52):DC(N52) DC(T-51):DG(N51) DC(T-50):DG(N50) DG(T-49):DC(N49) DC(T-48):DG(N48) DT(T-47):DA(N47) DC(T-46):DG(N46) DA(T-45):DT(N45) DA(T-44):DT(N44) DT(T-43):DA(N43) DT(T-42):DA(N42) DG(T-41):DC(N41) DG(T-40):DC(N40) DT(T-39):DA(N39) DC(T-38):DG(N38) DG(T-37):DC(N37) DT(T-36):DA(N36) DA(T-35):DT(N35) DG(T-34):DC(N34) DA(T-33):DT(N33) DC(T-32):DG(N32) DA(T-31):DT(N31) DG(T-30):DC(N30) DC(T-29):DG(N29) DT(T-28):DA(N28) DC(T-27):DG(N27) DT(T-26):DA(N26) DA(T-25):DT(N25) DG(T-24):DC(N24) DC(T-23):DG(N23) DA(T-22):DT(N22) DC(T-21):DG(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DT(T-17):DA(N17) DT(T-16):DA(N16) DA(T-15):DT(N15) DA(T-14):DT(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DG(T-11):DC(N11) DC(T-10):DG(N10) DA(T-9):DT(N9) DC(T-8):DG(N8) DG(T-7):DC(N7) DT(T-6):DA(N6) DA(T-5):DT(N5) DC(T-4):DG(N4) DG(T-3):DC(N3) DC(T-2):DG(N2) DG(T-1):DC(N1) DC(T0):DG(N0) DT(T1):DA(N-1) DG(T2):DC(N-2) DT(T3):DA(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DC(T7):DG(N-7) DC(T8):DG(N-8) DG(T9):DC(N-9) DC(T10):DG(N-10) DG(T11):DC(N-11) DT(T12):DA(N-12) DT(T13):DA(N-13) DT(T14):DA(N-14) DT(T15):DA(N-15) DA(T16):DT(N-16) DA(T17):DT(N-17) DC(T18):DG(N-18) DC(T19):DG(N-19) DG(T20):DC(N-20) DC(T21):DG(N-21) DC(T22):DG(N-22) DA(T23):DT(N-23) DA(T24):DT(N-24) DG(T25):DC(N-25) DG(T26):DC(N-26) DG(T27):DC(N-27) DG(T28):DC(N-28) DA(T29):DT(N-29) DT(T30):DA(N-30) DT(T31):DA(N-31) DC(T37):DT(N-32) DA(T38):DT(N-38) DA(T39):DT(N-39) DG(T40):DC(N-40) DA(T41):DT(N-41) DC(T42):DG(N-42) DA(T43):DT(N-43) DC(T44):DG(N-44) DC(T45):DG(N-45) DA(T46):DT(N-46) DG(T47):DC(N-47) DG(T48):DC(N-48) DC(T49):DG(N-49) DA(T50):DT(N-50) DC(T51):DG(N-51) DG(T52):DC(N-52) DA(T53):DT(N-53) DG(T54):DC(N-54) DA(T55):DT(N-55) chaina ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaind chaine ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainf prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiagEasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/nIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >6j50_gh:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH SPT4/5 AND FOREIGN DNA, STALLED AT SHL(-1) OF THE NUCLEOSOME (TILTED CONFORMATION) organism=HOMO SAPIENS DNA sequence DG(1-66):DC(066) DT(1-65):DA(065) DT(1-64):DA(064) DT(1-63):DA(063) DT(1-62):DA(062) DT(1-61):DA(061) DT(1-59):DA(060) DC(1-58):DG(058) DT(1-57):DA(057) DG(1-56):DC(056) DT(1-55):DA(055) DC(1-54):DG(054) DT(1-53):DA(053) DC(1-52):DG(052) DG(1-51):DC(051) DT(1-50):DA(050) DG(1-49):DC(049) DC(1-48):DG(048) DC(1-47):DG(047) DT(1-46):DA(046) DG(1-45):DC(045) DG(1-44):DC(044) DT(1-43):DA(043) DG(1-42):DC(042) DT(1-41):DA(041) DC(1-40):DG(040) DT(1-39):DA(039) DT(1-38):DA(038) DG(1-37):DC(037) DG(1-36):DC(036) DG(1-35):DC(035) DT(1-34):DA(034) DG(1-33):DC(033) DT(1-32):DA(032) DA(1-31):DT(031) DA(1-30):DT(030) DT(1-29):DA(029) DC(1-27):DG(028) DC(1-26):DG(026) chaing ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainh prot.sequence aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtAvrlllpgelakhavsegtkavtkytsa >6j51_g:Histone-fold; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH SPT4/5 AND FOREIGN DNA, STALLED AT SHL(-1) OF THE NUCLEOSOME, WEAK ELF1 (+1 POSITION) organism=HOMO SAPIENS DNA sequence DT(031):DA(1-31) DA(032):DT(1-32) DC(033):DG(1-33) DA(034):DT(1-34) DC(035):DG(1-35) DC(036):DG(1-36) DC(037):DG(1-37) DA(038):DT(1-38) DA(039):DT(1-39) DG(040):DC(1-40) DA(041):DT(1-41) DC(042):DG(1-42) DA(043):DT(1-43) DC(044):DG(1-44) DC(045):DG(1-45) DA(046):DT(1-46) DG(047):DC(1-47) DG(048):DC(1-48) DC(049):DG(1-49) DA(050):DT(1-50) DC(051):DG(1-51) DG(052):DC(1-52) DA(053):DT(1-53) DG(054):DC(1-54) DA(055):DT(1-55) DC(056):DG(1-56) DA(057):DT(1-57) DG(058):DC(1-58) DA(060):DT(1-59) DA(061):DT(1-61) DA(062):DT(1-62) DA(063):DT(1-63) DA(064):DT(1-64) DA(065):DT(1-65) DC(066):DG(1-66) chaing ( 29) ARG42 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 prot.sequence aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >6j51_gh:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH SPT4/5 AND FOREIGN DNA, STALLED AT SHL(-1) OF THE NUCLEOSOME, WEAK ELF1 (+1 POSITION) organism=HOMO SAPIENS DNA sequence DG(1-66):DC(066) DT(1-65):DA(065) DT(1-64):DA(064) DT(1-63):DA(063) DT(1-62):DA(062) DT(1-61):DA(061) DT(1-59):DA(060) DC(1-58):DG(058) DT(1-57):DA(057) DG(1-56):DC(056) DT(1-55):DA(055) DC(1-54):DG(054) DT(1-53):DA(053) DC(1-52):DG(052) DG(1-51):DC(051) DT(1-50):DA(050) DG(1-49):DC(049) DC(1-48):DG(048) DC(1-47):DG(047) DT(1-46):DA(046) DG(1-45):DC(045) DG(1-44):DC(044) DT(1-43):DA(043) DG(1-42):DC(042) DT(1-41):DA(041) DC(1-40):DG(040) DT(1-39):DA(039) DT(1-38):DA(038) DG(1-37):DC(037) DG(1-36):DC(036) DG(1-35):DC(035) DT(1-34):DA(034) DG(1-33):DC(033) DT(1-32):DA(032) DA(1-31):DT(031) chaing ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainh prot.sequence aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtAvrlllpgelakhavsegtkavtkytsa >6j5b_AD:Homeodomain-like; title=STRUCTURAL BASIS FOR THE TARGET DNA RECOGNITION AND BINDING BY THE MYB DOMAIN OF PHOSPHATE STARVATION RESPONSE REGULATOR 1 organism=Arabidopsis thaliana DNA sequence DT(U1):DA(B20) DT(U2):DA(B19) DT(U3):DA(B18) DA(U4):DT(B17) DT(U5):DA(B16) DG(U6):DC(B15) DG(U7):DC(B14) DT(U8):DA(B13) DA(U9):DT(B12) DT(U10):DA(B11) DA(U11):DT(B10) DT(U12):DA(B9) DA(U13):DT(B8) DC(U14):DG(B7) DT(U15):DA(B6) DG(U16):DC(B5) DT(U17):DA(B4) DA(U18):DT(B3) DC(U19):DG(B2) DC(U20):DG(B1) chainA ( 2) ARG227 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 0 0 0 0 ( 46) LYS271 0 0 0 0 0 4 8 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) SER272 0 0 0 0 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 0 ( 50) GLN275 0 0 0 0 0 0 0 11 10 2 0 0 0 0 0 0 0 0 0 0 ( 51) LYS276 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG227 0 0 0 0 0 0 0 1 3 2 0 0 0 0 0 0 0 0 0 0 ( 46) LYS271 0 0 0 0 0 0 0 0 0 0 0 0 7 8 4 0 0 0 0 0 ( 47) SER272 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 ( 50) GLN275 0 0 0 0 0 0 0 0 0 0 2 10 11 0 0 0 0 0 0 0 ( 51) LYS276 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence aRmrwtpelheafveavnslggseratpkgvlkimkvegltiyhvKShlQKyrtary/aRmrwtpelheafveavnslggseratpkgvlkimkvegltiyhvKShlQKyrtary >6j5b_C:Homeodomain-like; title=STRUCTURAL BASIS FOR THE TARGET DNA RECOGNITION AND BINDING BY THE MYB DOMAIN OF PHOSPHATE STARVATION RESPONSE REGULATOR 1 organism=Arabidopsis thaliana DNA sequence DT(G1):DA(E20) DT(G2):DA(E19) DT(G3):DA(E18) DA(G4):DT(E17) DT(G5):DA(E16) DG(G6):DC(E15) DG(G7):DC(E14) DT(G8):DA(E13) DA(G9):DT(E12) DT(G10):DA(E11) DA(G11):DT(E10) DT(G12):DA(E9) DA(G13):DT(E8) DC(G14):DG(E7) DT(G15):DA(E6) DG(G16):DC(E5) DT(G17):DA(E4) DA(G18):DT(E3) DC(G19):DG(E2) DC(G20):DG(E1) chainC ( 4) ARG227 0 0 0 0 0 0 0 0 0 0 4 6 5 0 0 0 0 0 0 0 ( 48) LYS271 0 0 0 0 0 3 9 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) SER272 0 0 0 0 0 0 0 0 2 7 2 0 0 0 0 0 0 0 0 0 ( 52) GLN275 0 0 0 0 0 0 0 11 10 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gkaRmrwtpelheafveavnslggseratpkgvlkimkvegltiyhvKShlQkyrtary >6j5b_CF:Homeodomain-like; title=STRUCTURAL BASIS FOR THE TARGET DNA RECOGNITION AND BINDING BY THE MYB DOMAIN OF PHOSPHATE STARVATION RESPONSE REGULATOR 1 organism=Arabidopsis thaliana DNA sequence DG(E1):DC(G20) DG(E2):DC(G19) DT(E3):DA(G18) DA(E4):DT(G17) DC(E5):DG(G16) DA(E6):DT(G15) DG(E7):DC(G14) DT(E8):DA(G13) DA(E9):DT(G12) DT(E10):DA(G11) DA(E11):DT(G10) DT(E12):DA(G9) DA(E13):DT(G8) DC(E14):DG(G7) DC(E15):DG(G6) DA(E16):DT(G5) DT(E17):DA(G4) DA(E18):DT(G3) DA(E19):DT(G2) DA(E20):DT(G1) chainC ( 4) ARG227 0 0 0 0 0 0 0 5 6 4 0 0 0 0 0 0 0 0 0 0 ( 48) LYS271 0 0 0 0 0 0 0 0 0 0 0 0 7 9 3 0 0 0 0 0 ( 49) SER272 0 0 0 0 0 0 0 0 0 2 7 2 0 0 0 0 0 0 0 0 ( 52) GLN275 0 0 0 0 0 0 0 0 0 0 1 10 11 0 0 0 0 0 0 0 chainF ( 3) ARG227 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 0 ( 47) LYS271 0 0 0 0 0 3 10 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) SER272 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 ( 51) GLN275 0 0 0 0 0 0 0 14 10 2 0 0 0 0 0 0 0 0 0 0 ( 52) LYS276 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence gkaRmrwtpelheafveavnslggseratpkgvlkimkvegltiyhvKShlQkyrtary/kaRmrwtpelheafveavnslggseratpkgvlkimkvegltiyhvKShlQKyrtary >6j5b_HJ:Homeodomain-like; title=STRUCTURAL BASIS FOR THE TARGET DNA RECOGNITION AND BINDING BY THE MYB DOMAIN OF PHOSPHATE STARVATION RESPONSE REGULATOR 1 organism=Arabidopsis thaliana DNA sequence DT(K1):DA(I20) DT(K2):DA(I19) DT(K3):DA(I18) DA(K4):DT(I17) DT(K5):DA(I16) DG(K6):DC(I15) DG(K7):DC(I14) DT(K8):DA(I13) DA(K9):DT(I12) DT(K10):DA(I11) DA(K11):DT(I10) DT(K12):DA(I9) DA(K13):DT(I8) DC(K14):DG(I7) DT(K15):DA(I6) DG(K16):DC(I5) DT(K17):DA(I4) DA(K18):DT(I3) DC(K19):DG(I2) DC(K20):DG(I1) chainH ( 3) ARG227 0 0 0 0 0 0 0 0 0 0 3 6 2 0 0 0 0 0 0 0 ( 47) LYS271 0 0 0 0 0 3 8 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) SER272 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 ( 51) GLN275 0 0 0 0 0 0 0 11 10 2 0 0 0 0 0 0 0 0 0 0 ( 52) LYS276 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainJ ( 2) ARG227 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 ( 46) LYS271 0 0 0 0 0 0 0 0 0 0 0 0 8 10 3 0 0 0 0 0 ( 47) SER272 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 ( 50) GLN275 0 0 0 0 0 0 0 0 0 0 2 10 12 0 0 0 0 0 0 0 ( 51) LYS276 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence kaRmrwtpelheafveavnslggseratpkgvlkimkvegltiyhvKShlQKyrtary/aRmrwtpelheafveavnslggseratpkgvlkimkvegltiyhvKShlQKyrtaryr >6j99_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF HUMAN DOT1L IN COMPLEX WITH AN H2B- MONOUBIQUITINATED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/rakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/rktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcyts/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/ktrkesyaiyvykvlkqvhpdtgisskamSimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsak >6j99_D:Histone-fold; title=CRYO-EM STRUCTURE OF HUMAN DOT1L IN COMPLEX WITH AN H2B- MONOUBIQUITINATED NUCLEOSOME organism=? DNA sequence DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) chainD ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcyts >6j9a_A:DNA-binding_pseudobarrel_domain; title=CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA VAL1 IN COMPLEX WITH FLC DNA FRAGMENT organism=Arabidopsis thaliana DNA sequence DA(B1):DT(C14) DT(B2):DA(C13) DT(B3):DA(C12) DC(B4):DG(C11) DT(B5):DA(C10) DG(B6):DC(C9) DC(B7):DG(C8) DA(B8):DT(C7) DT(B9):DA(C6) DG(B10):DC(C5) DG(B11):DC(C4) DA(B12):DT(C3) DT(B13):DA(C2) DT(B14):DA(C1) chainA ( 12) SER302 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 19) ARG309 0 0 0 0 5 14 5 0 0 0 0 0 0 0 ( 21) VAL311 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 59) TRP349 0 0 0 0 0 4 19 0 0 0 0 0 0 0 ( 61) ASN351 0 0 0 0 0 0 0 3 8 8 0 0 0 0 ( 62) ASN352 0 0 0 0 0 0 0 0 3 1 0 0 0 0 ( 66) MET356 0 0 0 0 0 0 0 5 6 7 0 0 0 0 prot.sequence ivplfektlsaSdagrigRlVlpkacaeayfppisqsegiplkiqdvrgrewtfqfryWpNNnsrMyvlegvtpciqsmmlqagdtvtfsrvdpggklimgsrkaa >6j9b_A:DNA-binding_pseudobarrel_domain; title=ARABIDOPSIS FUS3-DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(B1):DT(C14) DT(B2):DA(C13) DT(B3):DA(C12) DC(B4):DG(C11) DT(B5):DA(C10) DG(B6):DC(C9) DC(B7):DG(C8) DA(B8):DT(C7) DT(B9):DA(C6) DG(B10):DC(C5) DG(B11):DC(C4) DA(B12):DT(C3) DT(B13):DA(C2) DT(B14):DA(C1) chainA ( 9) LYS97 0 0 0 0 0 0 0 3 4 0 0 0 0 0 ( 11) SER99 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 16) LEU104 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 18) ARG106 0 0 0 0 3 13 3 0 0 0 0 0 0 0 ( 20) ILE108 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 59) TRP147 0 0 0 0 0 4 27 1 0 0 0 0 0 0 ( 61) ASN149 0 0 0 0 0 0 0 11 10 4 0 0 0 0 ( 62) ASN150 0 0 0 0 0 0 0 0 1 1 1 1 0 0 ( 66) MET154 0 0 0 0 0 0 0 6 8 7 0 0 0 0 prot.sequence rflfqkelKnSdvssLrRmIlpkkaaeahlpaleckegipirmedldgfhvwtfkyryWpNNnsrMyvlentgdfvnahglqlgdfimvyqdlysnnyviqarkas >6j9c_D:DNA-binding_pseudobarrel_domain; title=CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA TRANSCRIPTION FACTOR LEC2- DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(F2):DT(E15) DA(F3):DT(E14) DT(F4):DA(E13) DC(F5):DG(E12) DC(F6):DG(E11) DA(F7):DT(E10) DT(F8):DA(E9) DG(F9):DC(E8) DC(F10):DG(E7) DA(F11):DT(E6) DG(F12):DC(E5) DA(F13):DT(E4) DA(F14):DT(E3) DT(F15):DA(E2) chainD ( 19) SER178 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 26) ARG185 0 0 0 0 0 0 0 1 14 8 0 0 0 0 ( 67) TRP226 0 0 0 0 0 0 1 19 9 0 0 0 0 0 ( 69) ASN228 0 0 0 0 5 7 7 0 0 0 0 0 0 0 ( 74) MET233 0 0 0 0 5 6 4 0 0 0 0 0 0 0 prot.sequence stfdnkklrvlcekelknSdvgslgRivlpkrdaeanlpklsdkegivvqmrdvfsmqswsfkykfWsNnksrMyvlentgefvkqngaeigdfltiyedesknlyfamngn >6j9e_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF XANTHOMONOS ORYZAE TRANSCRIPTION ELONGATION COMPLEX WITH NUSA AND THE BACTERIOPHAGE PROTEIN P7 organism=XANTHOMONAS ORYZAE PV. ORYZAE PXO99A DNA sequence DG(H1):DC(G22) DG(H2):DT(G21) DG(H3):DC(G20) DC(H4):DT(G19) DT(H5):DC(G18) DA(H6):DC(G17) DA(H14):DA(G16) DT(H15):DT(G15) DG(H16):DG(G14) DA(H17):DT(G13) DC(H18):DG(G12) DG(H19):DC(G11) DG(H20):DC(G10) DC(H21):DG(G9) DG(H22):DC(G8) DA(H23):DT(G7) DA(H24):DT(G6) DT(H25):DA(G5) DA(H26):DT(G4) DC(H27):DG(G3) DC(H28):DG(G2) DC(H29):DG(G1) chainC (149) ARG156 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP188 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP204 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) ILE473 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG479 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (529) LEU566 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (533) ARG570 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (538) VAL575 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sysftekkrirkdfgkqrsilevpfllaiqvdsyreflqedrkdlglhaalksvfpissysgnaaleyvgyklgqpvfderecrqrgmsygaplrvtvrlviydresstkaikyvkeqevylgeiplmtgngtfivngtervivsqlhRspgvffdhdrgkthssgkllysariipyrgsWldfefdpkdalftriDrrrklpvsillralgynneemlaeffeintfhivqlelvperlrgearhvkqleaagvaalavpddylvgrilshdvvdgstgellanandeisedqltafrkagvdavgtlwvndldrgpylsntlridptktqlealveiyrmmrpgepptkeaaqnlfhnlfftferydlstvgrmkfnrrvgrkdvlgesvlydkkyfaerndeeskrlvaehtdtsdilevikvlteirngrgvvddIdhlgnRrvrsvgemaenvfrvglvrveravkerlsmaltpqelinakpvaaaikeffgssqlsqfmdqnnplsevthkrrvsalgpggLtreRagfeVrdvhpthygrvctietpegpniglinslavfartnqygfletpyrkvldgkvsddveylsaieeneyviaqanaltdaknmlteqfvpcrfqgesllkppsevhfmdvspmqtvsvaaalvpflehddanralmganmqrqavptlrsqkplvgtgieravardsgvtvnalrggvieqidaarivvkvneaeiagvdiynlikytrsnqntcinqrplvnvgdviargdvladgpstdigelalgqnmliafmpwngynfedsillservveedryttihieeltcvardtklgpeeisadipnvseqalnrldesgvvyigaevragdimvgkvtpkgtpeekllraifgekasdvkdsslrvpmdgtvidvqvftrdgiekdkrarqieeneikrvkkdfddqfrileaaiyarlrsqivgieraqkqiqahekefearfadkrgkitqgddlapgvlkmvkvflavkrriqpgdkmagrhgnkgvvsnvvpvedmpymatgesvdivlnplgvpsrmnigqilevhlgwaakglgrkiqrmleaqaavselrkflddiynhdqrvdlsqfsdeellnlgknlidgvpmatpvfdgaseaeikrmleladlpqsgqtqlydgrtgeafdrkttvgymhylklnhlvddkmharstgpyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvqgrnqmyknivdgehemvagmpesfnvlvkeirslaihmele >6j9e_CD: title=CRYO-EM STRUCTURE OF XANTHOMONOS ORYZAE TRANSCRIPTION ELONGATION COMPLEX WITH NUSA AND THE BACTERIOPHAGE PROTEIN P7 organism=XANTHOMONAS ORYZAE PV. ORYZAE PXO99A DNA sequence DG(G1):DC(H29) DG(G2):DC(H28) DG(G3):DC(H27) DT(G4):DA(H26) DA(G5):DT(H25) DT(G6):DA(H24) DT(G7):DA(H23) DC(G8):DG(H22) DG(G9):DC(H21) DC(G10):DG(H20) DC(G11):DG(H19) DG(G12):DC(H18) DT(G13):DA(H17) DG(G14):DG(H16) DT(G15):DT(H15) DA(G16):DA(H14) DC(G17):DA(H6) DC(G18):DT(H5) DT(G19):DC(H4) DC(G20):DG(H3) DT(G21):DG(H2) DC(G22):DG(H1) chainC (149) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 (181) TRP188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 (197) ASP204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 (440) ILE473 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (446) ARG479 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 (529) LEU566 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (533) ARG570 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (538) VAL575 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 chainD ( 46) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 (120) LEU120 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (415) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (774) THR791 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (775) ALA792 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence sysftekkrirkdfgkqrsilevpfllaiqvdsyreflqedrkdlglhaalksvfpissysgnaaleyvgyklgqpvfderecrqrgmsygaplrvtvrlviydresstkaikyvkeqevylgeiplmtgngtfivngtervivsqlhRspgvffdhdrgkthssgkllysariipyrgsWldfefdpkdalftriDrrrklpvsillralgynneemlaeffeintfhivqlelvperlrgearhvkqleaagvaalavpddylvgrilshdvvdgstgellanandeisedqltafrkagvdavgtlwvndldrgpylsntlridptktqlealveiyrmmrpgepptkeaaqnlfhnlfftferydlstvgrmkfnrrvgrkdvlgesvlydkkyfaerndeeskrlvaehtdtsdilevikvlteirngrgvvddIdhlgnRrvrsvgemaenvfrvglvrveravkerlsmaltpqelinakpvaaaikeffgssqlsqfmdqnnplsevthkrrvsalgpggLtreRagfeVrdvhpthygrvctietpegpniglinslavfartnqygfletpyrkvldgkvsddveylsaieeneyviaqanaltdaknmlteqfvpcrfqgesllkppsevhfmdvspmqtvsvaaalvpflehddanralmganmqrqavptlrsqkplvgtgieravardsgvtvnalrggvieqidaarivvkvneaeiagvdiynlikytrsnqntcinqrplvnvgdviargdvladgpstdigelalgqnmliafmpwngynfedsillservveedryttihieeltcvardtklgpeeisadipnvseqalnrldesgvvyigaevragdimvgkvtpkgtpeekllraifgekasdvkdsslrvpmdgtvidvqvftrdgiekdkrarqieeneikrvkkdfddqfrileaaiyarlrsqivgieraqkqiqahekefearfadkrgkitqgddlapgvlkmvkvflavkrriqpgdkmagrhgnkgvvsnvvpvedmpymatgesvdivlnplgvpsrmnigqilevhlgwaakglgrkiqrmleaqaavselrkflddiynhdqrvdlsqfsdeellnlgknlidgvpmatpvfdgaseaeikrmleladlpqsgqtqlydgrtgeafdrkttvgymhylklnhlvddkmharstgpyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvqgrnqmyknivdgehemvagmpesfnvlvkeirslaihmele/mkdllnlfnqqrqtldfdaikialaspdlirswsygevkkpetinYrtfkperdglfcaaifgpikdyeclcgkykrmkhrgvvcekcgtevtlakvrrermghidlaspvahiwflksLpsriglmldmtlrdiervlyfeayvvtrrqllteeqyltarqeynddfdaamgaeavyellrtidlqsemtrlreeiastgsetklkrltkriklieaflesgnrpewmvmtvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlrrllelnapdiivrnekrmlqesvdalldngrrgraikrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylklhqcglpkkmalelfkpfvfaklqrrglattikaakklvereeaevwdileevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvctafnadfdgdqmavhvplsleaqlearalmmstnnilspangepiivpsqdvvlglyymsralenkkgegmvfantsevkraydnrvvelhakvkvritqvdvdrtsgtsivdttvgrallseilpeglpfqlantemtkknisrlinssyrllglkdtvvfadklmytgyayatragvsigiddmlipdekkgilteaeaevleiqeqyqsglvtagerynkvvdiwsrtseriakammdtigtekvenakgetidqksmnslyimadsgargsqaqirqlagmrglmarpdgsiietpikanfreglnvqeyfnsthgarkgladtalkTAnsgyltrrlvdvaqdvviteidcgtteglimtpiveggdvveplkervlgrvvaedvvtrntlldeawvakledasvqsvkvrstiscessfgvcarcygrdlarghqvnigeavgviaaqsigepgtqltdnitvkttgsvkfnnlkavsrsgelsvldghgrereryklpygatitaavkagqsvanwdpglprvadlfearkpkdpailaersgiisfgkdtkgkqrliikdtdgseheelipkyrqiivfegehvtkgetvvdgepspqdilrllgveplaaylvkeiqdvyrlqgvkindkhievitrqmlrkveivdqgnskflngeqverqrvieenarlvkrnelpakydpvllgitkaslatesfisaasfqettrvlteaavrgtrdnlrglkenvivgrlipagtglayhagrr >6j9f_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF XANTHOMONOS ORYZAE TRANSCRIPTION ELONGATION COMPLEX WITH THE BACTERIOPHAGE PROTEIN P7 organism=XANTHOMONAS ORYZAE PV. ORYZAE MAFF 311018 DNA sequence DG(G1):DC(H29) DG(G2):DC(H28) DG(G3):DC(H27) DT(G4):DA(H26) DA(G5):DT(H25) DT(G6):DA(H24) DT(G7):DA(H23) DC(G8):DG(H22) DG(G9):DC(H21) DC(G10):DG(H20) DC(G11):DG(H19) DG(G12):DC(H18) DT(G13):DA(H17) DG(G14):DG(H16) DT(G15):DT(H15) DA(G16):DA(H14) DC(G17):DA(H6) DC(G18):DT(H5) DT(G19):DC(H4) DC(G20):DG(H3) DT(G21):DG(H2) DC(G22):DG(H1) chainC (144) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (176) TRP188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 (192) ASP204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (193) ARG205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (456) ILE473 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 (462) ARG479 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 (549) LEU566 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (553) ARG570 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (558) VAL575 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 prot.sequence sysftekkrirkdfgkqrsilevpfllaiqvdsyrefldlglhaalksvfpissysgnaaleyvgyklgqpvfderecrqrgmsygaplrvtvrlviydresstkaikyvkeqevylgeiplmtgngtfivngtervivsqlhRspgvffdhdrgkthssgkllysariipyrgsWldfefdpkdalftriDRrrklpvsillralgynneemlaeffeintfhivqlelvperlrgetlnfdladgdkviveagkritarhvkqleaagvaalavpddylvgrilshdvvdgstgellanandeisedqltafrkagvdavgtlwvndldrgpylsntlridptktqlealveiyrmmrpgepptkeaaqnlfhnlfftferydlstvgrmkfnrrvgrkdvlgesvlydkkyfaerndeeskrlvaehtdtsdilevikvlteirngrgvvddIdhlgnRrvrsvgemaenvfrvglvrveravkerlsmaesegltpqelinakpvaaaikeffgssqlsqfmdqnnplsevthkrrvsalgpggLtreRagfeVrdvhpthygrvctietpegpniglinslavfartnqygfletpyrkvldgkvsddveylsaieeneyviaqanaltdaknmlteqfvpcrfqgesllkppsevhfmdvspmqtvsvaaalvpflehddanralmganmqrqavptlrsqkplvgtgieravardsgvtvnalrggvieqidaarivvkvneaeiagvdiynlikytrsnqntcinqrplvnvgdviargdvladgpstdigelalgqnmliafmpwngynfedsillservveedryttihieeltcvardtklgpeeisadipnvseqalnrldesgvvyigaevragdimvgkvtpkgsdvkdsslrvppgmdgtvidvqvftrdgiekdkrarqieeneikrvkkdfddqfrileaaiyarlrsqivgkieraqkqiqahekefearfadkrgkitqgddlapgvlkmvkvflavkrriqpgdkmagrhgnkgvvsnvvpvedmpymatgesvdivlnplgvpsrmnigqilevhlgwaakglgrkiqrmleaqaavselrkflddiynhdqrvdlsqfsdeellnlgknlidgvpmatpvfdgaseaeikrmleladlpqsgqtqlydgrtgeafdrkttvgymhylklnhlvddkmharstgpyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvqgrnqmyknivdgehemvagmpesfnvlvkeirslaihmele >6j9f_CD: title=CRYO-EM STRUCTURE OF XANTHOMONOS ORYZAE TRANSCRIPTION ELONGATION COMPLEX WITH THE BACTERIOPHAGE PROTEIN P7 organism=XANTHOMONAS ORYZAE PV. ORYZAE MAFF 311018 / XANTHOMONAS ORYZAE PV. ORYZAE PXO99A DNA sequence DG(G1):DC(H29) DG(G2):DC(H28) DG(G3):DC(H27) DT(G4):DA(H26) DA(G5):DT(H25) DT(G6):DA(H24) DT(G7):DA(H23) DC(G8):DG(H22) DG(G9):DC(H21) DC(G10):DG(H20) DC(G11):DG(H19) DG(G12):DC(H18) DT(G13):DA(H17) DG(G14):DG(H16) DT(G15):DT(H15) DA(G16):DA(H14) DC(G17):DA(H6) DC(G18):DT(H5) DT(G19):DC(H4) DC(G20):DG(H3) DT(G21):DG(H2) DC(G22):DG(H1) chainC (144) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (176) TRP188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 (192) ASP204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (193) ARG205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (456) ILE473 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 (462) ARG479 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 (549) LEU566 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (553) ARG570 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (558) VAL575 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 chainD ( 46) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 0 0 0 0 (120) LEU120 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (415) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (775) THR791 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (776) ALA792 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence sysftekkrirkdfgkqrsilevpfllaiqvdsyrefldlglhaalksvfpissysgnaaleyvgyklgqpvfderecrqrgmsygaplrvtvrlviydresstkaikyvkeqevylgeiplmtgngtfivngtervivsqlhRspgvffdhdrgkthssgkllysariipyrgsWldfefdpkdalftriDRrrklpvsillralgynneemlaeffeintfhivqlelvperlrgetlnfdladgdkviveagkritarhvkqleaagvaalavpddylvgrilshdvvdgstgellanandeisedqltafrkagvdavgtlwvndldrgpylsntlridptktqlealveiyrmmrpgepptkeaaqnlfhnlfftferydlstvgrmkfnrrvgrkdvlgesvlydkkyfaerndeeskrlvaehtdtsdilevikvlteirngrgvvddIdhlgnRrvrsvgemaenvfrvglvrveravkerlsmaesegltpqelinakpvaaaikeffgssqlsqfmdqnnplsevthkrrvsalgpggLtreRagfeVrdvhpthygrvctietpegpniglinslavfartnqygfletpyrkvldgkvsddveylsaieeneyviaqanaltdaknmlteqfvpcrfqgesllkppsevhfmdvspmqtvsvaaalvpflehddanralmganmqrqavptlrsqkplvgtgieravardsgvtvnalrggvieqidaarivvkvneaeiagvdiynlikytrsnqntcinqrplvnvgdviargdvladgpstdigelalgqnmliafmpwngynfedsillservveedryttihieeltcvardtklgpeeisadipnvseqalnrldesgvvyigaevragdimvgkvtpkgsdvkdsslrvppgmdgtvidvqvftrdgiekdkrarqieeneikrvkkdfddqfrileaaiyarlrsqivgkieraqkqiqahekefearfadkrgkitqgddlapgvlkmvkvflavkrriqpgdkmagrhgnkgvvsnvvpvedmpymatgesvdivlnplgvpsrmnigqilevhlgwaakglgrkiqrmleaqaavselrkflddiynhdqrvdlsqfsdeellnlgknlidgvpmatpvfdgaseaeikrmleladlpqsgqtqlydgrtgeafdrkttvgymhylklnhlvddkmharstgpyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvqgrnqmyknivdgehemvagmpesfnvlvkeirslaihmele/mkdllnlfnqqrqtldfdaikialaspdlirswsygevkkpetinYrtfkperdglfcaaifgpikdyeclcgkykrmkhrgvvcekcgtevtlakvrrermghidlaspvahiwflksLpsriglmldmtlrdiervlyfeayvvtrrqllteeqyltarqeynddfdaamgaeavyellrtidlqsemtrlreeiastgsetklkrltkriklieaflesgnrpewmvmtvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlrrllelnapdiivrnekrmlqesvdalldngrrgraikrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylklhqcglpkkmalelfkpfvfaklqrrglattikaakklvereeaevwdileevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvctafnadfdgdqmavhvplsleaqlearalmmstnnilspangepiivpsqdvvlglyymsralenkkgegmvfantsevkraydnrvvelhakvkvritqvdvdkrtsgtsivdttvgrallseilpeglpfqlantemtkknisrlinssyrllglkdtvvfadklmytgyayatragvsigiddmlipdekkgilteaeaevleiqeqyqsglvtagerynkvvdiwsrtseriakammdtigtekvenakgetidqksmnslyimadsgargsqaqirqlagmrglmarpdgsiietpikanfreglnvqeyfnsthgarkgladtalkTAnsgyltrrlvdvaqdvviteidcgtteglimtpiveggdvveplkervlgrvvaedvvtrntlldeawvakledasvqsvkvrstiscessfgvcarcygrdlarghqvnigeavgviaaqsigepgtqltdnitvkttgsvkfnnlksvahasgslvavsrsgelsvldghgrereryklpygatitakdgdavkagqsvanwdpglprvadlfearkpkdpailaersgiisfgkdtkgkqrliikdtdgseheelipkyrqiivfegehvtkgetvvdgepspqdilrllgveplaaylvkeiqdvyrlqgvkindkhievitrqmlrkveivdqgnskflngeqverqrvieenarlvkrnelpakydpvllgitkaslatesfisaasfqettrvlteaavrgtrdnlrglkenvivgrlipagtglayhagrr >6jbq_CDF: title=CRYOEM STRUCTURE OF ESCHERICHIA COLI SIGMAE TRANSCRIPTION INITIATION COMPLEX CONTAINING 5NT OF RNA organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(G1):DG(H48) DT(G2):DA(H47) DG(G3):DC(H46) DC(G4):DG(H45) DA(G5):DT(H44) DT(G6):DA(H43) DC(G7):DG(H42) DC(G8):DG(H41) DG(G9):DC(H40) DT(G10):DA(H39) DG(G11):DC(H38) DA(G12):DT(H37) DG(G13):DG(H36) DT(G14):DT(H35) DC(G15):DT(H34) DG(G16):DA(H33) DA(G17):DC(H32) DG(G18):DC(H31) DG(G19):DA(H30) DG(G20):DA(H29) DT(G21):DA(H28) DG(G22):DA(H27) DT(G23):DC(H26) DT(G24):DT(H25) DC(G25):DG(H24) DA(G26):DT(H23) DA(G27):DT(H22) DT(G28):DA(H21) DA(G29):DT(H20) DA(G30):DT(H19) DT(G31):DA(H18) DT(G32):DA(H17) DA(G33):DT(H16) DG(G34):DC(H15) DC(G35):DG(H14) DA(G36):DT(H13) DC(G37):DG(H12) DT(G38):DA(H11) DA(G39):DT(H10) DA(G40):DT(H9) DA(G41):DT(H8) DA(G42):DT(H7) DG(G43):DC(H6) DT(G44):DA(H5) DT(G45):DA(H4) DC(G46):DG(H3) DC(G47):DG(H2) DG(G48):DC(H1) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (479) SER480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (480) LEU481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 31) SER35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PRO42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LYS56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ALA60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) SER63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PHE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ARG65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASP67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) TRP73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) TYR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ILE77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASN80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LYS83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) VAL87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) GLU102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) PHE106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) TYR156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (165) THR169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (167) ARG171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 10 4 0 0 0 (168) SER172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (171) PHE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 (172) ARG176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 16 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveravkerlSLgdldtlmpqdminakpisaavkEffgSsqlsqFmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsNkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrsiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/ltdqvlvervqkgdqkafnllvvryqhkvaSlvsryvPSgdvpdvvqeafiKayrAldSFRgDsafyTWlYRIavNtaKNylVaqgRrppssdvdaiEaenFesggalkeisnpenlmlseelrqivfrtieslpedlrmaitlreldglsYeeiaaimdcpvgTvRSriFRareaidnkvqplir >6jbq_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYOEM STRUCTURE OF ESCHERICHIA COLI SIGMAE TRANSCRIPTION INITIATION COMPLEX CONTAINING 5NT OF RNA organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(H1):DG(G48) DG(H2):DC(G47) DG(H3):DC(G46) DA(H4):DT(G45) DA(H5):DT(G44) DC(H6):DG(G43) DT(H7):DA(G42) DT(H8):DA(G41) DT(H9):DA(G40) DT(H10):DA(G39) DA(H11):DT(G38) DG(H12):DC(G37) DT(H13):DA(G36) DG(H14):DC(G35) DC(H15):DG(G34) DT(H16):DA(G33) DA(H17):DT(G32) DA(H18):DT(G31) DT(H19):DA(G30) DT(H20):DA(G29) DA(H21):DT(G28) DT(H22):DA(G27) DT(H23):DA(G26) DG(H24):DC(G25) DT(H25):DT(G24) DC(H26):DT(G23) DA(H27):DG(G22) DA(H28):DT(G21) DA(H29):DG(G20) DA(H30):DG(G19) DC(H31):DG(G18) DC(H32):DA(G17) DA(H33):DG(G16) DT(H34):DC(G15) DT(H35):DT(G14) DG(H36):DG(G13) DT(H37):DA(G12) DC(H38):DG(G11) DA(H39):DT(G10) DC(H40):DG(G9) DG(H41):DC(G8) DG(H42):DC(G7) DA(H43):DT(G6) DT(H44):DA(G5) DG(H45):DC(G4) DC(H46):DG(G3) DA(H47):DT(G2) DG(H48):DC(G1) chainF ( 31) SER35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PRO42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LYS56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ALA60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) SER63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PHE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ARG65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASP67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) TRP73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) TYR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ILE77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASN80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LYS83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) VAL87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) GLU102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) PHE106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) TYR156 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) THR169 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ARG171 0 0 0 4 10 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) SER172 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) PHE175 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG176 16 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ltdqvlvervqkgdqkafnllvvryqhkvaSlvsryvPSgdvpdvvqeafiKayrAldSFRgDsafyTWlYRIavNtaKNylVaqgRrppssdvdaiEaenFesggalkeisnpenlmlseelrqivfrtieslpedlrmaitlreldglsYeeiaaimdcpvgTvRSriFRareaidnkvqplir >6jbx_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE FABT IN COMPLEX WITH DNA organism=Streptococcus pneumoniae DNA sequence DA(C1):DT(D23) DA(C2):DT(D22) DT(C3):DA(D21) DA(C4):DT(D20) DG(C5):DC(D19) DT(C6):DA(D18) DT(C7):DA(D17) DT(C8):DA(D16) DG(C9):DC(D15) DA(C10):DT(D14) DC(C11):DG(D13) DT(C12):DA(D12) DG(C13):DC(D11) DT(C14):DA(D10) DC(C15):DG(D9) DA(C16):DT(D8) DA(C17):DT(D7) DA(C18):DT(D6) DT(C19):DA(D5) DT(C20):DA(D4) DA(C21):DT(D3) DT(C22):DA(D2) DG(C23):DC(D1) chainA ( 64) THR61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 65) LEU62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 ( 67) THR64 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 ( 69) THR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 ( 70) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 91) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 prot.sequence hhmdyqrineyltsifnnvlvieevnlrgsrfkdisikemhtidvigkapdvtpsqvskelmvTLgTvTTslnnlerkgyiervrseqdrRvvhlhltkkgrlihrlhkrfhkamvekiidgmseeeiavmgkgltnlyqfledlk >6jbx_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE FABT IN COMPLEX WITH DNA organism=Streptococcus pneumoniae DNA sequence DC(D1):DG(C23) DA(D2):DT(C22) DT(D3):DA(C21) DA(D4):DT(C20) DA(D5):DT(C19) DT(D6):DA(C18) DT(D7):DA(C17) DT(D8):DA(C16) DG(D9):DC(C15) DA(D10):DT(C14) DC(D11):DG(C13) DA(D12):DT(C12) DG(D13):DC(C11) DT(D14):DA(C10) DC(D15):DG(C9) DA(D16):DT(C8) DA(D17):DT(C7) DA(D18):DT(C6) DC(D19):DG(C5) DT(D20):DA(C4) DA(D21):DT(C3) DT(D22):DA(C2) DT(D23):DA(C1) chainA ( 64) THR61 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LEU62 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR64 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR66 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR67 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ARG88 0 8 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 61) THR61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 62) LEU62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 ( 64) THR64 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 66) THR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 ( 67) THR67 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 1 0 0 0 0 0 0 ( 88) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 1 prot.sequence hhmdyqrineyltsifnnvlvieevnlrgsrfkdisikemhtidvigkapdvtpsqvskelmvTLgTvTTslnnlerkgyiervrseqdrRvvhlhltkkgrlihrlhkrfhkamvekiidgmseeeiavmgkgltnlyqfledlk/dyqrineyltsifnnvlvieevnlrgsrfkdisikemhtidvigkapdvtpsqvskelmvTLgTvTTslnnlerkgyiervRseqdrRvvhlhltkkgrlihrlhkrfhkamvekiidgmseeeiavmgkgltnlyqfledlk >6jcx_CDF: title=MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX WITH ECF SIGMA FACTOR SIGMA H AND 6NT RNA organism=MYCOBACTERIUM TUBERCULOSIS H37RV DNA sequence DT(H3):DA(G25) DG(H4):DC(G24) DC(H5):DG(G23) DA(H6):DT(G22) DT(H7):DA(G21) DC(H8):DG(G20) DC(H9):DG(G19) DG(H10):DC(G18) DT(H11):DA(G17) DG(H12):DC(G16) DA(H13):DT(G15) chainC (439) GLU466 0 0 0 0 0 0 0 0 0 0 6 (440) ARG467 0 0 0 0 0 0 0 0 0 0 7 chainD (290) ARG291 0 0 2 2 0 0 0 0 0 0 0 chainF prot.sequence ssnnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregededleraaanlgin/ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivveladgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/tdeeltarferdaiplldqlyggalrmtrnpadaedllqetmvkayagfrsfrhgtnlkawlyriltntyinsyrkkqrqpaeypteqitdwqlasnaehsstglrsaevealealpdteikealqalpeefrmavyyadvegfpykeiaeimdtpigtvmsrlhrgrrqlrglladvardrgfar >6jcx_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX WITH ECF SIGMA FACTOR SIGMA H AND 6NT RNA organism=? DNA sequence DT(H3):DA(G25) DG(H4):DC(G24) DC(H5):DG(G23) DA(H6):DT(G22) DT(H7):DA(G21) DC(H8):DG(G20) DC(H9):DG(G19) DG(H10):DC(G18) DT(H11):DA(G17) DG(H12):DC(G16) DA(H13):DT(G15) chainD (290) ARG291 0 0 2 2 0 0 0 0 0 0 0 prot.sequence ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivveladgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa >6jcy_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS RNA POLYMERASE TRANSCRIPTION INITIATION OPEN COMPLEX WITH A CHIMERIC ECF SIGMA FACTOR SIGH/E organism=? DNA sequence DT(G15):DA(H13) DC(G16):DG(H12) DA(G17):DT(H11) DC(G18):DG(H10) DG(G19):DC(H9) DG(G20):DC(H8) DA(G21):DT(H7) DT(G22):DA(H6) DG(G23):DC(H5) DC(G24):DG(H4) DA(G25):DT(H3) chainC (444) GLU466 2 0 0 0 0 0 0 0 0 0 0 (445) ARG467 6 0 0 0 0 0 0 0 0 0 0 prot.sequence rpqsssnnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregededleraaan >6jcy_CDF: title=MYCOBACTERIUM TUBERCULOSIS RNA POLYMERASE TRANSCRIPTION INITIATION OPEN COMPLEX WITH A CHIMERIC ECF SIGMA FACTOR SIGH/E organism=MYCOBACTERIUM TUBERCULOSIS H37RV DNA sequence DT(H3):DA(G25) DG(H4):DC(G24) DC(H5):DG(G23) DA(H6):DT(G22) DT(H7):DA(G21) DC(H8):DG(G20) DC(H9):DG(G19) DG(H10):DC(G18) DT(H11):DA(G17) DG(H12):DC(G16) DA(H13):DT(G15) chainC (444) GLU466 0 0 0 0 0 0 0 0 0 0 2 (445) ARG467 0 0 0 0 0 0 0 0 0 0 6 chainD (290) ARG291 0 1 4 2 0 0 0 0 0 0 0 chainF prot.sequence rpqsssnnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregededleraaan/ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqlttgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/deeltarferdaiplldqlyggalrmtrnpadaedllqetmvkayagfrsfrhgtnlkawlyriltntyinsyrrrarirmealpedydrvpadepnpeqiyhdarlgpdlqaalqalpeefrmavyyadvegfpykeiaeimdtpigtvmsrlhrgrrqlrgl >6jdv_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF NME1CAS9 IN COMPLEX WITH SGRNA AND TARGET DNA (ATATGATT PAM) IN CATALYTIC STATE organism=Neisseria meningitidis serogroup C (strain 8013) / Neisseria meningitidis serogroup C (strain 8013) DNA sequence DT(C1):DA(D11) DA(C2):DT(D10) DA(C3):DT(D9) DA(C4):DT(D8) DA(C5):DT(D7) DT(C6):DA(D6) DC(C7):DG(D5) DA(C8):DT(D4) DT(C9):DA(D3) DA(C10):DT(D2) DT(C11):DA(D1) chainA (935) GLN981 0 0 4 10 2 0 0 0 0 0 0 (978) HIS1024 0 0 0 0 0 4 11 27 0 0 0 (981) THR1027 0 0 0 0 3 2 0 0 0 0 0 (983) ASN1029 0 0 0 2 2 0 0 0 0 0 0 prot.sequence sinyilgldigiasvgwamveideeenpirlidlgvrvferaedslamarrlarsvrrltrrrahrllrtrrllkregvlqaanfdenglikslpntpwqlraaaldrkltplewsavllhlikhrgylsqrkndfrtpaelalnkfekesghirnqrsdyshtfsrkdlqaelillfekqkefgnphvsgglkegietllmtqrpalsgdavqkmlghctfepaepkaakntytaerfiwltklnnlrileqgserpltdteratlmdepyrkskltyaqarkllgledtaffkglrygkdnaeastlmemkayhaisralekeglkdkksplnlspelqdeigtafslfktdeditgrlkdriqpeileallkhisfdkfvqislkalrrivplmeqgkrydeacaeiygdhygkknteekiylppipadeirnpvvlralsqarkvingvvrrygsparihietarevgksfkdrkeiekrqeenrkdrekaaakfreyfpnfvgepkskdilklrlyeqqhgkclysgkeinlgrlnekgyveidaalpfsrtwddsfnnkvlvlgsenqnkgnqtpyeyfngkdnsrewqefkarvetsrfprskkqrillqkfdrnlndtryvnrflcqfvadrmrltgkgkkrvfasngqitnllrgfwglrkvraendrhhaldavvvacstvamqqkitrfvrykemnafdgktidtgevlhqkthfpqpweffaqevmirvfgkpdgkpefeeadtleklrtllaeklssrpeavheyvtplfvsrapnrkmsgqghmetvksakrldegvsvlrvpltqlklkdlekmvnrerepklyealkarleahkddpakafaepfykydkagnrtqqvkavrveqvqktgvwvrnhngiadnatmvrvdvfekgdkyylvpiyswqvakgilpdravvQgkdeedwqliddsfnfkfslhpndlvevitkkarmfgyfascHrgTgNinirihdldhkigkngilegigvktalsfqkyqidelgkeirpcrlkkrppvr >6je3_A: title=CRYSTAL STRUCTURE OF NME2CAS9 IN COMPLEX WITH SGRNA AND TARGET DNA (AGGCCC PAM) WITH 5 NT OVERHANG organism=Neisseria meningitidis DNA sequence DT(C1):DA(D16) DA(C2):DT(D15) DA(C3):DT(D14) DC(C4):DG(D13) DT(C5):DA(D12) DG(C6):DC(D11) DG(C7):DC(D10) DG(C8):DC(D9) DC(C9):DG(D8) DC(C10):DG(D7) DT(C11):DA(D6) chainA (619) LYS843 0 0 0 0 0 0 0 0 0 1 0 (804) ASP1028 0 0 0 0 0 0 6 13 0 0 0 (806) SER1030 0 0 0 0 0 0 2 0 0 0 0 (807) ASN1031 0 0 0 0 4 0 0 0 0 0 0 (809) ARG1033 0 0 0 0 12 9 1 0 0 0 0 (811) TYR1035 0 0 0 0 0 0 0 3 0 0 0 (820) LYS1044 0 0 0 0 0 0 0 0 0 0 1 prot.sequence npinyilglaigiasvgwamveideeenpirlidlgvrvferaevpktgdslamarrlarsvrrltrrrahrllrarrllkregvlqaadfdenglikslpntpwqlraaaldrkltplewsavllhlikhrgylsqrkkelgallkgvannahalqtgdfrtpaelalnkfekesghirnqrgdyshtfsrkdlqaelillfekqkefgnphvsgglkegietllmtqrpalsgdavqkmlghctfepaepkaakntytaerfiwltklnnlrileqpltdteratlmdepyrkskltyaqarkllgledtaffkglrygkdnaeastlmemkayhaisralekeglkdkksplnlsselqdeigtafslfktdeditgrlkdrvqpeileallkhisfdkfvqislkalrrivplmeqgkrydeacaeiygdhyteekiylppipadeirnpvvlralsqarkvingvvrrygspaihietarevgksfkdrkeieflcqfvadhilltgkgkrrvfasngqitnllrgendrhhaldavvvactvampweffaqevmirvfgkpdgkpefeeadtpeklrtllaeklssrpeavheyvtplfvsrapnrkmsgahKdtlrsakrfvkhnekisvkrvwlteikladlenmvnykngreielyealkarleayggnakqafdpkdnpfykkggqlvkavrvektqesgvllnkknaytiadngdmvrvdvfckvdkkgknqyfivpiyawqvaenilpdidckgyriddsytfcfslhkydliafqkdekskvefayyincDsSNgRfYlawhdkgsKeqqfristqnlvliqkyqvnelgkeirpcrlkkrppvr >6je4_K: title=CRYSTAL STRUCTURE OF NME1CAS9-SGRNA-DSDNA DIMER MEDIATED BY DOUBLE PROTEIN INHIBITOR ACRIIC3 MONOMERS organism=NEISSERIA MENINGITIDIS 8013 DNA sequence DT(M1):DA(N35) DA(M2):DT(N34) DA(M3):DT(N33) DA(M4):DT(N32) DA(M5):DT(N31) DT(M6):DA(N30) DC(M7):DG(N29) DA(M8):DT(N28) DT(M9):DA(N27) DA(M10):DT(N26) DT(M11):DA(N25) chainK (959) GLN981 0 0 5 10 2 0 0 0 0 0 0 (1002) HIS1024 0 0 0 0 0 2 11 26 0 0 0 (1005) THR1027 0 0 0 0 5 3 0 0 0 0 0 (1007) ASN1029 0 0 0 3 4 0 0 0 0 0 0 (1021) LYS1043 0 0 0 0 0 1 0 0 0 0 0 prot.sequence aafkpnsinyilglaigiasvgwamveideeenpirlidlgvrvferaevpktgdslamarrlarsvrrltrrrahrllrtrrllkregvlqaanfdenglikslpntpwqlraaaldrkltplewsavllhlikhrgylsqrknetadkelgallkgvagnahalqtgdfrtpaelalnkfekesghirnqrsdyshtfsrkdlqaelillfekqkefgnphvsgglkegietllmtqrpalsgdavqkmlghctfepaepkaakntytaerfiwltklnnlrileqgserpltdteratlmdepyrkskltyaqarkllgledtaffkglrygkdnaeastlmemkayhaisralekeglkdkksplnlspelqdeigtafslfktdeditgrlkdriqpeileallkhisfdkfvqislkalrrivplmeqgkrydeacaeiygdnteekiylppipadeirnpvvlralsqarkvingvvrrygsparihietarevgksfkdrkeiekrqeenrkdrekaaakfreyfpnfvgepkskdilklrlyeqqhgkclysgkeinlgrlnekgyveidaalpfsrtwddsfnnkvlvlgsenqnkgnqtpyeyfngkdnsrewqefkarvetsrfprskkqrillqkfdedgfkernlndtryvnrflcqfvadrmrltgkgkkrvfasngqitnllrgfwglrkvraendrhhaldavvvacstvamqqkitrfvrykemnahqkthfpqpweffaqevmirvfgkpdgkpefeeadtleklrtllaeklssrpeavheyvtplfvsrapnrkmsgqghmetvksakrldegvsvlrvpltqlklkdlekmvnrerepklyealkarleahkddpakafaepfykydkagnrtqqvkavrveqvqktgvwvrnhngiadnatmvrvdvfekgdkyylvpiyswqvakgilpdravvQgkdeedwqliddsfnfkfslhpndlvevitkkarmfgyfascHrgTgNinirihdldhkigKngilegigvktalsfqkyqidelgkeirpcrlkkrppvr >6jfu_A: title=CRYSTAL STRUCTURE OF NME2CAS9 IN COMPLEX WITH SGRNA AND TARGET DNA (AGGCCC PAM) organism=Neisseria meningitidis DNA sequence DT(C1):DA(D11) DA(C2):DT(D10) DA(C3):DT(D9) DC(C4):DG(D8) DT(C5):DA(D7) DG(C6):DC(D6) DG(C7):DC(D5) DG(C8):DC(D4) DC(C9):DG(D3) DC(C10):DG(D2) DT(C11):DA(D1) chainA (645) LYS843 0 0 0 0 0 0 0 0 0 1 1 (830) ASP1028 0 0 0 0 0 0 8 7 0 0 0 (832) SER1030 0 0 0 0 0 0 6 0 0 0 0 (833) ASN1031 0 0 0 0 1 0 0 0 0 0 0 (835) ARG1033 0 0 0 0 12 8 0 0 0 0 0 (837) TYR1035 0 0 0 0 0 0 0 4 0 0 0 (854) THR1052 0 0 0 0 1 0 0 0 0 0 0 prot.sequence npinyilglaigiasvgwamveideeenpirlidlgvrvferaevpktgdslamarrlarsvrrltrrrahrllrarrllkregvlqaadfdenglikslpntpwqlraaaldrkltplewsavllhlikhrgylsqrknegetadkelgallkgvannahalqtgdfrtpaelalnkfekesghirnqrgdyshtfsrkdlqaelillfekqkefgnphvsgglkegietllmtqrpalsgdavqkmlghctfepaepkaakntytaerfiwltklnnlrileqgserpltdteratlmdepyrkskltyaqarkllgledtaffkglreastlmemkayhaisralekeglkdkksplnlsselqdeigtafslfktdeditgrlkdrvqpeileallkhisfdkfvqislkalrrivplmeqgkrydeacaeiygdhygkknteekiylppipadeirnpvvlralsqarkvingvvrrygsparihietarevgksfkdrkeiedtryvnrflcqfvadhivfasngqitnllrgkvraendrhhaldavvvacstvamqqkitrfvrykthfpqpweffaqevmirvfgkpdgkpefeeadtpeklrtllaeklpeavheyvtplfvsrapnrkmsgahKdtlrsakrfvkhnekisvkrvwlteikladlenmvnykngreielyealkarleayggnakqafdpkdnpfykkggqlvkavrvektqesgvllnkknaytiadngdmvrvdvfckvdkkgknqyfivpiyawqvaenilpdidckgyriddsytfcfslhkydliafqkdekskvefayyincDsSNgRfYlawhdkgskeqqfrisTqnlvliqkyqvnelgkeirpcrlkkrppvr >6jg8_A:HCP-like; title=CRYSTAL STRUCTURE OF AIMR IN COMPLEX WITH DNA organism=Bacillus phage SPbeta DNA sequence DA(D1):DT(C30) DC(D2):DG(C29) DT(D3):DA(C28) DA(D4):DT(C27) DG(D5):DC(C26) DA(D6):DT(C25) DT(D7):DA(C24) DG(D8):DC(C23) DT(D9):DA(C22) DT(D10):DA(C21) DA(D11):DT(C20) DT(D12):DA(C19) DT(D13):DA(C18) DA(D14):DT(C17) DA(D15):DT(C16) DA(D16):DT(C15) DA(D17):DT(C14) DC(D18):DG(C13) DC(D19):DG(C12) DT(D20):DA(C11) DA(D21):DT(C10) DA(D22):DT(C9) DT(D23):DA(C8) DA(D24):DT(C7) DT(D25):DA(C6) DT(D26):DA(C5) DT(D27):DA(C4) DA(D28):DT(C3) DA(D29):DT(C2) DG(D30):DC(C1) chainA ( 30) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 ( 32) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 7 ( 33) PRO33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 ( 36) ASP36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 43) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence meliriamkkdlendnslmnkwatvaglkNpNPlyDflnhdgKtfnefssivnivksqypdreyelmkdyclnldvktkaarsaleyadanmffeiedvlidsmiscsnmkskeygkvykihrelsnsvitefeavkrlgklniktpemnsfsrllllyhylstgnfspmaqlikqidlseisenmyirntyqtrvhvlmsniklnensleecreyskkalestnilrfqvfsyltignsllfsnyelaqenflkglsisvqnenynmifqqalcflnnvwrkenkwinfesdsimdlqeqahcfinfnenskakevldkldllvhndnelamhyylkgrleqnkacfyssieyfkksndkflirlpllelqkmgenqkllellll >6jg8_AB:HCP-like; title=CRYSTAL STRUCTURE OF AIMR IN COMPLEX WITH DNA organism=Bacillus phage SPbeta DNA sequence DA(D1):DT(C30) DC(D2):DG(C29) DT(D3):DA(C28) DA(D4):DT(C27) DG(D5):DC(C26) DA(D6):DT(C25) DT(D7):DA(C24) DG(D8):DC(C23) DT(D9):DA(C22) DT(D10):DA(C21) DA(D11):DT(C20) DT(D12):DA(C19) DT(D13):DA(C18) DA(D14):DT(C17) DA(D15):DT(C16) DA(D16):DT(C15) DA(D17):DT(C14) DC(D18):DG(C13) DC(D19):DG(C12) DT(D20):DA(C11) DA(D21):DT(C10) DA(D22):DT(C9) DT(D23):DA(C8) DA(D24):DT(C7) DT(D25):DA(C6) DT(D26):DA(C5) DT(D27):DA(C4) DA(D28):DT(C3) DA(D29):DT(C2) DG(D30):DC(C1) chainA ( 30) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 ( 32) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 7 ( 33) PRO33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 ( 36) ASP36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 43) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainB ( 31) ASN30 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASN32 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) PRO33 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meliriamkkdlendnslmnkwatvaglkNpNPlyDflnhdgKtfnefssivnivksqypdreyelmkdyclnldvktkaarsaleyadanmffeiedvlidsmiscsnmkskeygkvykihrelsnsvitefeavkrlgklniktpemnsfsrllllyhylstgnfspmaqlikqidlseisenmyirntyqtrvhvlmsniklnensleecreyskkalestnilrfqvfsyltignsllfsnyelaqenflkglsisvqnenynmifqqalcflnnvwrkenkwinfesdsimdlqeqahcfinfnenskakevldkldllvhndnelamhyylkgrleqnkacfyssieyfkksndkflirlpllelqkmgenqkllellll/mmeliriamkkdlendnslmnkwatvaglkNpNPlydflnhdgktfnefssivnivksqypdreyelmkdyclnldvktkaarsaleyadanmffeiedvlidsmiscsnmkskeygkvykihrelsnsvitefeavkrlgklniktpemnsfsrllllyhylstgnfspmaqlikqidlseisenmyirntyqtrvhvlmsniklnensleecreyskkalestnilrfqvfsyltignsllfsnyelaqenflkglsisvqnenynmifqqalcflnnvwrkenkwinfesdsimdlqeqahcfinfnenskakevldkldllvhndnelamhyylkgrleqnkacfyssieyfkksndkflirlpllelqkmgenqkllelllllehhhh >6jgw_AB:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR CADR FROM P. PUTIDA IN COMPLEX WITH DNA organism=PSEUDOMONAS PUTIDA DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DC(D3):DG(C25) DA(D4):DT(C24) DC(D5):DG(C23) DC(D6):DG(C22) DC(D7):DG(C21) DT(D8):DA(C20) DG(D9):DC(C19) DT(D10):DA(C18) DA(D11):DT(C17) DG(D12):DC(C16) DC(D13):DG(C15) DC(D14):DG(C14) DA(D15):DT(C13) DC(D16):DG(C12) DT(D17):DA(C11) DA(D18):DT(C10) DT(D19):DA(C9) DA(D20):DT(C8) DG(D21):DC(C7) DG(D22):DC(C6) DG(D23):DC(C5) DT(D24):DA(C4) DC(D25):DG(C3) DA(D26):DT(C2) DA(D27):DT(C1) chainB ( 15) GLU15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 1 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 chainA ( 15) GLU15 0 0 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 0 0 0 1 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkigelakatdcavEtiRYyereqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddsgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaecailqqle/mkigelakatdcavEtiRYyeReqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddsgsvnalidehiehvqaridglvalqeqlvelrrrcnaqga >6jgw_B:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR CADR FROM P. PUTIDA IN COMPLEX WITH DNA organism=PSEUDOMONAS PUTIDA DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DC(D3):DG(C25) DA(D4):DT(C24) DC(D5):DG(C23) DC(D6):DG(C22) DC(D7):DG(C21) DT(D8):DA(C20) DG(D9):DC(C19) DT(D10):DA(C18) DA(D11):DT(C17) DG(D12):DC(C16) DC(D13):DG(C15) DC(D14):DG(C14) DA(D15):DT(C13) DC(D16):DG(C12) DT(D17):DA(C11) DA(D18):DT(C10) DT(D19):DA(C9) DA(D20):DT(C8) DG(D21):DC(C7) DG(D22):DC(C6) DG(D23):DC(C5) DT(D24):DA(C4) DC(D25):DG(C3) DA(D26):DT(C2) DA(D27):DT(C1) chainB ( 15) GLU15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 1 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 prot.sequence mkigelakatdcavEtiRYyeReqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddsgsvnalidehiehvqaridglvalqeqlvelrrrcnaqga >6jgx_AB:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR CADR FROM P. PUTIDA IN COMPLEX WITH CADMIUM(II) AND DNA organism=PSEUDOMONAS PUTIDA DNA sequence DA(D2):DT(C22) DC(D3):DG(C21) DC(D4):DG(C20) DC(D5):DG(C19) DT(D6):DA(C18) DG(D7):DC(C17) DT(D8):DA(C16) DA(D9):DT(C15) DG(D10):DC(C14) DC(D11):DG(C13) DC(D12):DG(C12) DA(D13):DT(C11) DC(D14):DG(C10) DT(D15):DA(C9) DA(D16):DT(C8) DT(D17):DA(C7) DA(D18):DT(C6) DG(D19):DC(C5) DG(D20):DC(C4) DG(D21):DC(C3) DT(D22):DA(C2) chainA ( 15) GLU15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 1 12 6 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 15) GLU15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 0 0 0 0 5 12 1 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 prot.sequence mkigelakatdcavEtiRYyereqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaecailqqletngavsvpetshvgrsh/mkigelakatdcavEtiRYyeReqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaecailqqletngavsvpet >6jgx_B:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR CADR FROM P. PUTIDA IN COMPLEX WITH CADMIUM(II) AND DNA organism=PSEUDOMONAS PUTIDA DNA sequence DA(C2):DT(D22) DC(C3):DG(D21) DC(C4):DG(D20) DC(C5):DG(D19) DT(C6):DA(D18) DA(C7):DT(D17) DT(C8):DA(D16) DA(C9):DT(D15) DG(C10):DC(D14) DT(C11):DA(D13) DG(C12):DC(D12) DG(C13):DC(D11) DC(C14):DG(D10) DT(C15):DA(D9) DA(C16):DT(D8) DC(C17):DG(D7) DA(C18):DT(D6) DG(C19):DC(D5) DG(C20):DC(D4) DG(C21):DC(D3) DT(C22):DA(D2) chainB ( 15) GLU15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 1 12 5 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkigelakatdcavEtiRYyeReqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaecailqqletngavsvpet >6jhe_A:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF BACILLUS SUBTILIS SIGW DOMAIN 4 IN COMPLEXED WITH -35 ELEMENT DNA organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DT(B2):DA(C12) DT(B3):DA(C11) DG(B4):DC(C10) DA(B5):DT(C9) DA(B6):DT(C8) DA(B7):DT(C7) DC(B8):DG(C6) DC(B9):DG(C5) DT(B10):DA(C4) DT(B11):DA(C3) DT(B12):DA(C2) chainA ( 22) LEU155 0 0 0 0 0 0 0 1 0 0 0 ( 35) THR168 0 0 0 1 0 0 0 0 0 0 0 ( 37) LYS170 0 0 0 0 0 7 16 5 0 0 0 ( 38) THR171 0 0 0 10 2 0 0 0 0 0 0 ( 41) HIS174 0 0 0 0 3 2 0 0 0 0 0 ( 42) ARG175 0 12 9 2 0 0 0 0 0 0 0 prot.sequence ilklpdkyrtvivlkyidelsLieigeilnipvgTvKTriHRgrealrkqlrd >6jm9_A:Histone-fold; title=CRYO-EM STRUCTURE OF DOT1L BOUND TO UNMODIFIED NUCLEOSOME organism=? DNA sequence DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DT(J-53):DA(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DA(J-2):DT(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DA(J52):DT(I-52) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera >6jm9_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF DOT1L BOUND TO UNMODIFIED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-52):DA(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DT(I2):DA(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DA(I53):DT(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 17) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrVhrllrkgnyaerVgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6jma_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF DOT1L BOUND TO H2B UBIQUITINATED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-52):DA(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J34) DG(I-33):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DT(I2):DA(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DA(I53):DT(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 2) ARG30 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 17) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgNyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrVhrllrkgnyaerVgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6jni_CD:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR CADR FROM P. PUTIDA IN COMPLEX WITH ZINC(II) AND DNA organism=PSEUDOMONAS PUTIDA DNA sequence DC(L2):DG(K24) DA(L3):DT(K23) DC(L4):DG(K22) DC(L5):DG(K21) DC(L6):DG(K20) DT(L7):DA(K19) DG(L8):DC(K18) DT(L9):DA(K17) DA(L10):DT(K16) DG(L11):DC(K15) DC(L12):DG(K14) DC(L13):DG(K13) DA(L14):DT(K12) DC(L15):DG(K11) DT(L16):DA(K10) DA(L17):DT(K9) DT(L18):DA(K8) DA(L19):DT(K7) DG(L20):DC(K6) DG(L21):DC(K5) DG(L22):DC(K4) DT(L23):DA(K3) DC(L24):DG(K2) DA(L25):DT(K1) chainC ( 15) GLU15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 5 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 chainD ( 15) GLU15 0 0 0 0 0 0 6 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 0 1 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkigelakatdcavEtiRYyereqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrccailqqletngavsvp/mkigelakatdcavEtiRYyeReqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaecailqqletngavsvpetehshvgrsh >6jni_E:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR CADR FROM P. PUTIDA IN COMPLEX WITH ZINC(II) AND DNA organism=PSEUDOMONAS PUTIDA DNA sequence DA(N1):DT(M25) DC(N2):DG(M24) DA(N3):DT(M23) DC(N4):DG(M22) DC(N5):DG(M21) DC(N6):DG(M20) DT(N7):DA(M19) DG(N8):DC(M18) DT(N9):DA(M17) DA(N10):DT(M16) DG(N11):DC(M15) DC(N12):DG(M14) DC(N13):DG(M13) DA(N14):DT(M12) DC(N15):DG(M11) DT(N16):DA(M10) DA(N17):DT(M9) DT(N18):DA(M8) DA(N19):DT(M7) DG(N20):DC(M6) DG(N21):DC(M5) DG(N22):DC(M4) DT(N23):DA(M3) DC(N24):DG(M2) DA(N25):DT(M1) chainE ( 15) GLU15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 7 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 1 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 prot.sequence mkigelakatdcavEtiRYyeReqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspcgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaecailqqletngavshshvgrsh >6jni_EF:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR CADR FROM P. PUTIDA IN COMPLEX WITH ZINC(II) AND DNA organism=PSEUDOMONAS PUTIDA DNA sequence DT(M1):DA(N25) DG(M2):DC(N24) DA(M3):DT(N23) DC(M4):DG(N22) DC(M5):DG(N21) DC(M6):DG(N20) DT(M7):DA(N19) DA(M8):DT(N18) DT(M9):DA(N17) DA(M10):DT(N16) DG(M11):DC(N15) DT(M12):DA(N14) DG(M13):DC(N13) DG(M14):DC(N12) DC(M15):DG(N11) DT(M16):DA(N10) DA(M17):DT(N9) DC(M18):DG(N8) DA(M19):DT(N7) DG(M20):DC(N6) DG(M21):DC(N5) DG(M22):DC(N4) DT(M23):DA(N3) DG(M24):DC(N2) DT(M25):DA(N1) chainE ( 15) GLU15 0 0 0 0 0 0 0 7 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 0 0 1 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 15) GLU15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 15 6 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 prot.sequence mkigelakatdcavEtiRYyeReqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspcgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaecailqqletngavshshvgrsh/mkigelakatdcavEtiRYyereqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrccailqqletngavsvp >6jnl_A:beta-beta-alpha_zinc_fingers; title=REF6 ZNF2-4-NAC004 COMPLEX organism=Arabidopsis thaliana DNA sequence DC(C1):DG(D12) DA(C2):DT(D11) DA(C3):DT(D10) DA(C4):DT(D9) DA(C5):DT(D8) DC(C6):DG(D7) DA(C7):DT(D6) DG(C8):DC(D5) DA(C9):DT(D4) DG(C10):DC(D3) DA(C11):DT(D2) DA(C101):DT(D1) chainA ( 14) PHE1278 0 0 0 4 3 0 0 0 0 0 0 0 ( 18) TYR1282 0 0 0 0 7 7 0 0 0 0 0 0 ( 45) TRP1309 0 0 0 0 0 0 6 0 0 0 0 0 ( 47) TRP1311 0 0 0 0 7 14 7 0 0 0 0 0 ( 48) SER1312 0 0 0 0 0 0 1 2 0 0 0 0 ( 51) GLU1315 0 0 0 0 0 0 0 1 1 0 0 0 ( 75) PHE1339 0 0 0 0 0 0 0 0 4 8 0 0 ( 76) VAL1340 0 0 0 0 0 2 6 0 0 0 0 0 ( 77) SER1341 0 0 0 0 0 0 1 11 7 0 0 0 ( 78) ASP1342 0 0 0 0 0 0 0 0 0 8 1 0 ( 80) SER1344 0 0 0 0 0 0 4 0 0 0 0 0 ( 81) ARG1345 0 0 0 0 0 0 0 0 1 7 0 0 prot.sequence rnicpikgcgknfFshkYlvqhqrvhsddrplkcpwkgckmtfkWaWSrtEhirvhtgarpyvcaepdcgqtfrFVSDfSRhkrktghs >6jnm_A:beta-beta-alpha_zinc_fingers; title=REF6 ZNF2-4-NAC004-MC3 COMPLEX organism=Arabidopsis thaliana DNA sequence DC(C1):DG(D12) DA(C2):DT(D11) DA(C3):DT(D10) DA(C4):DT(D9) DA(C5):DT(D8) DC(C6):DG(D7) DA(C7):DT(D6) DG(C8):5CM(D5) DA(C9):DT(D4) DG(C10):DC(D3) DA(C11):DT(D2) DA(C12):DT(D1) chainA ( 14) PHE1278 0 0 0 4 5 0 0 0 0 0 0 0 ( 17) LYS1281 0 1 0 0 0 0 0 0 0 0 0 0 ( 18) TYR1282 0 0 0 0 7 7 0 0 0 0 0 0 ( 45) TRP1309 0 0 0 0 0 0 6 0 0 0 0 0 ( 47) TRP1311 0 0 0 0 7 15 8 3 0 0 0 0 ( 48) SER1312 0 0 0 0 0 0 1 3 0 0 0 0 ( 51) GLU1315 0 0 0 0 0 0 1 4 5 0 0 0 ( 75) PHE1339 0 0 0 0 0 0 0 0 4 8 0 0 ( 76) VAL1340 0 0 0 0 0 3 6 0 0 0 0 0 ( 77) SER1341 0 0 0 0 0 0 0 12 6 0 0 0 ( 78) ASP1342 0 0 0 0 0 0 0 0 0 9 1 0 ( 80) SER1344 0 0 0 0 0 0 4 0 0 0 0 0 ( 81) ARG1345 0 0 0 0 0 0 0 0 1 3 0 0 prot.sequence rnicpikgcgknffshkylvqhqrvhsddrplkcpwkgckmtfkwawsrtEhirvhtgarpyvcaepdcgqtfrfvSDfsrhkrktghs >6jnn_AN:beta-beta-alpha_zinc_fingers; title=REF6 ZNF2-4-NAC004-MC1 COMPLEX organism=Arabidopsis thaliana DNA sequence DC(C1):DG(D12) DA(C2):DT(D11) 5CM(I3):DT(D10) DA(C4):DT(D9) DA(C5):DT(D8) DC(C6):DG(D7) DA(C7):DT(D6) DG(C8):DC(D5) DA(C9):DT(D4) DA(C11):DT(D2) DA(C12):DT(D1) DT(I1):DA(H12) DT(I2):DA(H11) 5CM(I3):DG(H10) DT(I4):DA(H9) DC(I5):DG(H8) DT(I6):DA(H7) DG(I7):DC(H6) DT(I8):DA(H5) DT(I9):DA(H4) DT(I10):DA(H3) DT(I11):DA(H2) DG(I12):DC(H1) chainA ( 14) PHE1278 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) TYR1282 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) TRP1309 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TRP1311 0 0 0 0 9 17 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) SER1312 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLU1315 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) PHE1339 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) VAL1340 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) SER1341 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ASP1342 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) SER1344 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 14) PHE1278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 ( 18) TYR1282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 ( 47) TRP1311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 7 0 0 0 0 ( 48) SER1312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 51) GLU1315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 ( 75) PHE1339 0 0 5 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 ( 76) VAL1340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 77) SER1341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 ( 78) ASP1342 0 0 2 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 81) ARG1345 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rnicpikgcgknfFshkYlvqhqrvhsddrplkcpwkgckmtfkWaWSrtEhirvhtgarpyvcaepdcgqtfrFVSDfSrhkrktghs/rnicpikgcgknfFshkYlvqhqrvhsddrplkcpwkgckmtfkwaWSrtEhirvhtgarpyvcaepdcgqtfrFVSDfsRhkrktghs >6jnn_G:beta-beta-alpha_zinc_fingers; title=REF6 ZNF2-4-NAC004-MC1 COMPLEX organism=Arabidopsis thaliana DNA sequence DT(L1):DA(K12) DT(L2):DA(K11) 5CM(L3):DG(K10) DT(L4):DA(K9) DC(L5):DG(K8) DT(L6):DA(K7) DG(L7):DC(K6) DT(L8):DA(K5) DT(L9):DA(K4) DT(L10):DA(K3) DT(L11):DA(K2) DG(L12):DC(K1) chainG ( 17) TYR1282 0 0 0 0 0 0 6 8 0 0 0 0 ( 44) TRP1309 0 0 0 0 0 6 2 0 0 0 0 0 ( 46) TRP1311 0 0 0 0 0 7 13 9 0 0 0 0 ( 47) SER1312 0 0 0 0 1 1 0 0 0 0 0 0 ( 50) GLU1315 0 0 0 1 0 0 0 0 0 0 0 0 ( 74) PHE1339 0 0 10 4 0 0 0 0 0 0 0 0 ( 75) VAL1340 0 0 0 0 1 5 0 0 0 0 0 0 ( 76) SER1341 0 0 0 4 10 0 0 0 0 0 0 0 ( 77) ASP1342 0 1 3 0 0 0 0 0 0 0 0 0 ( 80) ARG1345 1 1 0 0 0 0 0 0 0 0 0 0 prot.sequence nicpikgcgknffshkYlvqhqrvhsddrplkcpwkgckmtfkWaWSrtEhirvhtgarpyvcaepdcgqtfrFVSDfsRhkrktghs >6jnx_CDFPQ:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYO-EM STRUCTURE OF A Q-ENGAGED ARRESTED COMPLEX organism=ENTEROBACTERIA PHAGE SFI / ESCHERICHIA COLI K-12 DNA sequence DT(T-3):DA(N65) DT(T-2):DA(N64) DG(T-1):DC(N63) DC(T0):DG(N62) DA(T1):DT(N61) DA(T2):DT(N60) DC(T3):DG(N59) DT(T4):DA(N58) DT(T5):DA(N57) DA(T6):DT(N56) DA(T7):DT(N55) DG(T8):DC(N54) DA(T9):DT(N53) DC(T10):DG(N52) DT(T11):DA(N51) DC(T12):DG(N50) DA(T13):DT(N49) DC(T14):DG(N48) DT(T15):DA(N47) DA(T16):DT(N46) DA(T17):DG(N45) DC(T18):DA(N44) DC(T19):DG(N43) DC(T20):DG(N42) DC(T21):DG(N41) DA(T22):DT(N40) DC(T23):DG(N39) DC(T24):DG(N38) DT(T25):DA(N37) DT(T26):DA(N36) DA(T27):DT(N35) DT(T28):DA(N34) DG(T29):DC(N33) DC(T30):DG(N32) DG(T31):DC(N31) DA(T32):DT(N30) DA(T33):DT(N29) DT(T34):DA(N28) DA(T35):DT(N27) DG(T36):DC(N26) DT(T37):DA(N25) DG(T38):DC(N24) DT(T39):DA(N23) DT(T40):DA(N22) DG(T41):DC(N21) DC(T42):DG(N20) DT(T43):DA(N19) DC(T44):DG(N18) DA(T45):DT(N17) DT(T46):DA(N16) DT(T47):DA(N15) DT(T48):DA(N14) DG(T49):DC(N13) DC(T50):DG(N12) DT(T51):DA(N11) DC(T52):DG(N10) DA(T53):DT(N9) DA(T54):DT(N8) DT(T55):DA(N7) DG(T56):DC(N6) DA(T57):DT(N5) DT(T58):DA(N4) DG(T59):DC(N3) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (480) LEU481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 89) HIS95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (107) ARG113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 4 0 0 0 0 (118) ALA124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (121) ARG127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 1 0 0 0 0 0 0 0 0 0 (122) ARG128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 0 0 0 0 chainQ ( 77) HIS95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) ARG113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) SER122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ALA124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ARG127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ARG128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveravkerlsLgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/eigrttDpVRmyMremgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvddpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqfldliqegniglmkavdkFEyrRgYKfSTYaTWWirQaitrsiadqa/nltkeqhewlngwlelwgawvysgrlekrmssviakfmesvepgrvmtrpmcndddgmlisqvvdsvmyidkkafgillsyyahgsskHaiasyyhrvarprkmlcRgggriqkpslAtcRRevdeilnaslfmiypvldsafknrk/nltkeqhewlngwlelwgawvysgrlekrmssviakfmesvdddgmlisqvvdsvmyidkkafgillsyyahgsskHaiasyyhrvarprkmlcRgggriqkpSlAtcRRevdeilnaslfmiypv >6jnx_P: title=CRYO-EM STRUCTURE OF A Q-ENGAGED ARRESTED COMPLEX organism=ENTEROBACTERIA PHAGE SFI DNA sequence DC(N3):DG(T59) DA(N4):DT(T58) DT(N5):DA(T57) DC(N6):DG(T56) DA(N7):DT(T55) DT(N8):DA(T54) DT(N9):DA(T53) DG(N10):DC(T52) DA(N11):DT(T51) DG(N12):DC(T50) DC(N13):DG(T49) DA(N14):DT(T48) DA(N15):DT(T47) DA(N16):DT(T46) DT(N17):DA(T45) DG(N18):DC(T44) DA(N19):DT(T43) DG(N20):DC(T42) DC(N21):DG(T41) DA(N22):DT(T40) DA(N23):DT(T39) DC(N24):DG(T38) DA(N25):DT(T37) DC(N26):DG(T36) DT(N27):DA(T35) DA(N28):DT(T34) DT(N29):DA(T33) DT(N30):DA(T32) DC(N31):DG(T31) DG(N32):DC(T30) DC(N33):DG(T29) DA(N34):DT(T28) DT(N35):DA(T27) DA(N36):DT(T26) DA(N37):DT(T25) DG(N38):DC(T24) DG(N39):DC(T23) DT(N40):DA(T22) DG(N41):DC(T21) DG(N42):DC(T20) DG(N43):DC(T19) DA(N44):DC(T18) DG(N45):DA(T17) DT(N46):DA(T16) DA(N47):DT(T15) DG(N48):DC(T14) DT(N49):DA(T13) DG(N50):DC(T12) DA(N51):DT(T11) DG(N52):DC(T10) DT(N53):DA(T9) DC(N54):DG(T8) DT(N55):DA(T7) DT(N56):DA(T6) DA(N57):DT(T5) DA(N58):DT(T4) DG(N59):DC(T3) DT(N60):DA(T2) DT(N61):DA(T1) DG(N62):DC(T0) DC(N63):DG(T-1) DA(N64):DT(T-2) DA(N65):DT(T-3) chainP ( 89) HIS95 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG113 0 0 0 0 4 15 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) ALA124 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) ARG127 0 0 0 0 0 0 0 0 0 1 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG128 0 0 0 0 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nltkeqhewlngwlelwgawvysgrlekrmssviakfmesvepgrvmtrpmcndddgmlisqvvdsvmyidkkafgillsyyahgsskHaiasyyhrvarprkmlcRgggriqkpslAtcRRevdeilnaslfmiypvldsafknrk >6joo_A: title=CRYSTAL STRUCTURE OF CORYNEBACTERIUM DIPHTHERIAE CAS9 IN COMPLEX WITH SGRNA AND TARGET DNA organism=? DNA sequence DC(C1):DG(D12) DA(C2):DT(D11) DT(C3):DA(D10) DT(C4):DA(D9) DA(C5):DT(D8) DC(C6):DG(D7) DC(C7):DG(D6) DC(C8):DG(D5) chainA ( 49) ILE47 0 0 0 0 0 0 0 16 (568) LYS818 0 0 0 0 0 0 0 1 (761) PHE1011 0 0 1 5 10 2 0 0 (765) LYS1015 0 6 4 0 0 0 0 0 (767) ARG1017 0 0 0 0 0 4 2 0 (792) ARG1042 0 0 0 0 0 3 14 17 (793) PRO1043 0 0 0 1 0 0 0 0 (796) LEU1046 0 0 2 1 0 0 0 0 prot.sequence shmkyhvgidvgtfsvglaaievddagmpiktlslvshihdsgldpdeIksavtrlassgiarrtrrlyrrkrrrlqqldkfiqrqgwpvieledysdplypwkvraelaasyiadekergeklsvalrhiarhrgwrnpyakvsslylpdgpsdafkaireeikrasgqpvpetatvgqmvtlceklrgeggvlsarlqqsdyareiqeicrmqeigqelyrkiidvvfaaespkgsassrvgkdplqpgknralkasdafqryriaalignveeknlvfdhlvnltparppthdtnrsivnsriaplvdwwktasaleqhamvkalsnaevddfdspegakvqaffadldddvhakldslhlpvgraaysedtlvrltrrmlsdgytarlqefgiepswtpptprigepvgnpavdrvlktvsrwlesatktwgaperviiehsvawmanelrsrvaqhfashgttvrvyrgsltaegklkffdgvgksrldrrhhaidaaviaftsdyvaetlavrsdaehraawrvwcqkmeklsalltedlrddrvvvmsnvrlrlgngsahKetigklskvklssqlsvsdidkassealwcaltrepgfdpkeglpanperhirvngthvyagdniglfpvsagsialrggyaelgssfhharvykitsgkkpafamlrvytidllpyrnqdlfsvelkpqtmsmrqaekklrdalatgnaeylgwlvvddelvvdtskiatdqvkaveaelgtirrwrvdgfFspsKlRlrplqmskegikkesapelskiidRPgwLpavnklfsdgnvtvvrrdslgrvrlestahlpvtwkvq >6jou_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME CONTAINING H2A.Z.1 S42R organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 32) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/tkavsrsqraglqfpvgrihrhlksrttrhgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihkslig/srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kkphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/vsrsqraglqfpvgrihrhlksrttrhgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksli/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >6jou_G:Histone-fold; title=CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME CONTAINING H2A.Z.1 S42R organism=? DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainG prot.sequence vsrsqraglqfpvgrihrhlksrttrhgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksli >6jpi_A:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF PA4674 IN COMPLEX WITH ITS OPERATOR DNA (28BP) FROM PSEUDOMONAS AERUGINOSA organism=? DNA sequence DA(F1):DT(E28) DG(F2):DC(E27) DT(F3):DA(E26) DT(F4):DA(E25) DA(F5):DT(E24) DA(F6):DT(E23) DC(F7):DG(E22) DG(F8):DC(E21) DC(F9):DG(E20) DT(F10):DA(E19) DT(F11):DA(E18) DA(F12):DT(E17) DA(F13):DT(E16) DC(F14):DG(E15) DG(F15):DC(E14) DT(F16):DA(E13) DT(F17):DA(E12) DA(F18):DT(E11) DA(F19):DT(E10) DG(F20):DC(E9) DG(F21):DC(E8) DG(F22):DC(E7) DT(F23):DA(E6) DT(F24):DA(E5) DA(F25):DT(E4) DA(F26):DT(E3) DT(F27):DA(E2) DG(F28):DC(E1) chainA ( 23) ALA28 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER37 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA38 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) PRO39 0 0 0 4 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ASN42 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrpihpgeilrdeflmefdispAalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepl >6jpi_ABCD:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF PA4674 IN COMPLEX WITH ITS OPERATOR DNA (28BP) FROM PSEUDOMONAS AERUGINOSA organism=? DNA sequence DA(F1):DT(E28) DG(F2):DC(E27) DT(F3):DA(E26) DT(F4):DA(E25) DA(F5):DT(E24) DA(F6):DT(E23) DC(F7):DG(E22) DG(F8):DC(E21) DC(F9):DG(E20) DT(F10):DA(E19) DT(F11):DA(E18) DA(F12):DT(E17) DA(F13):DT(E16) DC(F14):DG(E15) DG(F15):DC(E14) DT(F16):DA(E13) DT(F17):DA(E12) DA(F18):DT(E11) DA(F19):DT(E10) DG(F20):DC(E9) DG(F21):DC(E8) DG(F22):DC(E7) DT(F23):DA(E6) DT(F24):DA(E5) DA(F25):DT(E4) DA(F26):DT(E3) DT(F27):DA(E2) DG(F28):DC(E1) chainA ( 23) ALA28 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER37 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA38 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) PRO39 0 0 0 4 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ASN42 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ALA28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 32) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 34) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 1 5 0 0 0 0 0 0 0 0 0 0 ( 37) ASN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 22) ALA28 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER37 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ALA38 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) PRO39 0 0 0 0 0 0 0 0 0 0 6 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN42 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 23) ALA28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 32) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 33) ALA38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 34) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 5 0 0 0 ( 37) ASN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 41) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 44) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 prot.sequence mrpihpgeilrdeflmefdispAalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepl/mrpihpgeilrdeflmefdispAalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepll/rpihpgeilrdeflmefdispAalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepl/mrpihpgeilrdeflmefdispAalaralkvSAPtvNdivReqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepll >6jr0_A:Histone-fold; title=CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME PHASED WITH 12 SELENIUM ATOMS organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge >6jr0_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME PHASED WITH 12 SELENIUM ATOMS organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 1) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aktrssraglqfpvgrvhrllRkgnyservgagapvylaavleyltaeilemagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/Rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgemakhavsegtkavtkytsa/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/RhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilemagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgemakhavsegtkavtkytsa >6jr1_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME PHASED WITH 16 SELENIUM ATOMS organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 1) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilemagnaardnkktriiprhlqmairndeelnkllgrvtiaqggvlpniqavllpk/srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlmlpgemakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/RhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilemagnaardnkktRiiprhlqmairndeelnkllgrvtiaqggvlpniqavllpk/Rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlmlpgemakhavsegtkavtkytsa >6jr1_F:Histone-fold; title=CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME PHASED WITH 16 SELENIUM ATOMS organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainF ( 1) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >6jrf_AB: title=CRYSTAL STRUCTURE OF ZMMOC1-HOLLIDAY JUNCTION COMPLEX IN THE PRESENCE OF CALCIUM organism=Zea mays DNA sequence DA(D1):DT(C33) DT(D2):DA(C32) DC(D3):DG(C31) DT(D4):DA(C30) DG(D5):DC(C29) DC(D6):DG(C28) DA(D7):DT(C27) DG(D8):DC(C26) DG(D9):DC(C25) DG(D10):DC(C24) DC(D12):DT(C23) DT(D13):DC(C22) DG(D14):DT(C21) DG(D15):DG(C20) DT(D18):DG(C19) DC(D19):DT(C18) DC(D20):DC(C14) DA(D21):DA(C13) DG(D22):DG(C12) DA(D23):DA(C11) DC(D24):DG(C10) DC(D25):DG(C9) DT(D26):DA(C8) DA(D27):DT(C7) DC(D28):DG(C6) DG(D29):DC(C5) DA(D30):DT(C4) DT(D31):DA(C3) DT(D32):DA(C2) DG(D33):DC(C1) chainA ( 36) SER144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 69) SER177 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 71) PHE179 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 19 42 0 0 0 0 0 0 0 0 ( 72) PRO180 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 24 0 0 0 0 0 0 0 ( 76) LYS184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 77) GLN185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 (106) GLN214 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 chainB ( 37) GLU145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 70) PRO178 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) PHE179 0 0 0 0 0 0 0 0 43 17 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 72) PRO180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 ( 74) ASP182 0 0 0 0 0 0 0 25 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LYS184 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) GLN185 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) GLN214 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gwvigvdpdiggaiavlspdgssqvfdnpfvhivvSevirkrldtksiiqllrgldappgttayieksSPFPtDgKQgwwstgfsyglwiaslvasgfsvvpiasQtwkayfglmrsetpkddsrqaasilfpdkdqslklkkhhgraealllaaygkglvlp/gwvigvdpdiggaiavlspdgssqvfdnpfvhivvsEvirkrldtksiiqllrgldappgttayieksSPFPtDgKQgwwstgfsyglwiaslvasgfsvvpiasQtwkayfglmrsetpkddsrqaasilfpdkdqslklkkhhgraealllaaygkglvlp >6jrf_B: title=CRYSTAL STRUCTURE OF ZMMOC1-HOLLIDAY JUNCTION COMPLEX IN THE PRESENCE OF CALCIUM organism=Zea mays DNA sequence DA(D1):DT(C33) DT(D2):DA(C32) DC(D3):DG(C31) DT(D4):DA(C30) DG(D5):DC(C29) DC(D6):DG(C28) DA(D7):DT(C27) DG(D8):DC(C26) DG(D9):DC(C25) DG(D10):DC(C24) DC(D12):DT(C23) DT(D13):DC(C22) DG(D14):DT(C21) DG(D15):DG(C20) DT(D18):DG(C19) DC(D19):DT(C18) DC(D20):DC(C14) DA(D21):DA(C13) DG(D22):DG(C12) DA(D23):DA(C11) DC(D24):DG(C10) DC(D25):DG(C9) DT(D26):DA(C8) DA(D27):DT(C7) DC(D28):DG(C6) DG(D29):DC(C5) DA(D30):DT(C4) DT(D31):DA(C3) DT(D32):DA(C2) DG(D33):DC(C1) chainB ( 37) GLU145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 70) PRO178 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) PHE179 0 0 0 0 0 0 0 0 43 17 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 72) PRO180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 ( 74) ASP182 0 0 0 0 0 0 0 25 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LYS184 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) GLN185 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) GLN214 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gwvigvdpdiggaiavlspdgssqvfdnpfvhivvsEvirkrldtksiiqllrgldappgttayieksSPFPtDgKQgwwstgfsyglwiaslvasgfsvvpiasQtwkayfglmrsetpkddsrqaasilfpdkdqslklkkhhgraealllaaygkglvlp >6jrg_AB: title=CRYSTAL STRUCTURE OF ZMMOC1 H253A MUTANT IN COMPLEX WITH HOLLIDAY JUNCTION organism=Zea mays DNA sequence DC(C1):DG(D33) DA(C2):DT(D32) DA(C3):DT(D31) DT(C4):DA(D30) DC(C5):DG(D29) DG(C6):DC(D28) DT(C7):DA(D27) DA(C8):DT(D26) DG(C9):DC(D25) DG(C10):DC(D24) DG(C12):DA(D23) DA(C13):DG(D22) DC(C14):DA(D21) DC(C15):DC(D20) DT(C16):DC(D19) DT(C17):DT(D18) DT(C18):DT(D17) DG(C19):DG(D15) DG(C20):DG(D14) DT(C21):DT(D13) DC(C22):DC(D12) DT(C23):DT(D11) DC(C24):DG(D10) DC(C25):DG(D9) DC(C26):DG(D8) DT(C27):DA(D7) DG(C28):DC(D6) DC(C29):DG(D5) DA(C30):DT(D4) DG(C31):DC(D3) DA(C32):DT(D2) DT(C33):DA(D1) chainA ( 69) SER177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 70) PRO178 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) PHE179 0 0 0 0 0 0 0 0 43 18 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 72) PRO180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 ( 74) ASP182 0 0 0 0 0 0 0 23 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LYS184 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) GLN185 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) GLN214 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 chainB ( 36) SER144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 37) GLU145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER177 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 71) PHE179 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 18 43 0 0 0 0 0 0 0 0 ( 72) PRO180 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 28 0 0 0 0 0 0 0 ( 76) LYS184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 77) GLN185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 (106) GLN214 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 prot.sequence gwvigvdpdiggaiavlspdgssqvfdnpfvhivvsevirkrldtksiiqllrgldappgttayieksSPFPtDgKQgwwstgfsyglwiaslvasgfsvvpiasQtwkayfglmrsetpkddsrqaasilfpdkdqslklkkhagraealllaaygkglvlp/gwvigvdpdiggaiavlspdgssqvfdnpfvhivvSEvirkrldtksiiqllrgldappgttayieksSPFPtDgKQgwwstgfsyglwiaslvasgfsvvpiasQtwkayfglmrsetpkddsrqaasilfpdkdqslklkkhagraealllaaygkglvlp >6jrg_B: title=CRYSTAL STRUCTURE OF ZMMOC1 H253A MUTANT IN COMPLEX WITH HOLLIDAY JUNCTION organism=Zea mays DNA sequence DC(C1):DG(D33) DA(C2):DT(D32) DA(C3):DT(D31) DT(C4):DA(D30) DC(C5):DG(D29) DG(C6):DC(D28) DT(C7):DA(D27) DA(C8):DT(D26) DG(C9):DC(D25) DG(C10):DC(D24) DG(C12):DA(D23) DA(C13):DG(D22) DC(C14):DA(D21) DC(C15):DC(D20) DT(C16):DC(D19) DT(C17):DT(D18) DT(C18):DT(D17) DG(C19):DG(D15) DG(C20):DG(D14) DT(C21):DT(D13) DC(C22):DC(D12) DT(C23):DT(D11) DC(C24):DG(D10) DC(C25):DG(D9) DC(C26):DG(D8) DT(C27):DA(D7) DG(C28):DC(D6) DC(C29):DG(D5) DA(C30):DT(D4) DG(C31):DC(D3) DA(C32):DT(D2) DT(C33):DA(D1) chainB ( 36) SER144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 37) GLU145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER177 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 71) PHE179 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 18 43 0 0 0 0 0 0 0 0 ( 72) PRO180 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASP182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 28 0 0 0 0 0 0 0 ( 76) LYS184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 77) GLN185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 (106) GLN214 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 prot.sequence gwvigvdpdiggaiavlspdgssqvfdnpfvhivvSEvirkrldtksiiqllrgldappgttayieksSPFPtDgKQgwwstgfsyglwiaslvasgfsvvpiasQtwkayfglmrsetpkddsrqaasilfpdkdqslklkkhagraealllaaygkglvlp >6jrp_AD:HMG-box; title=CRYSTAL STRUCTURE OF CIC-HMG-ETV5-DNA COMPLEX organism=Homo sapiens DNA sequence DA(B1):DT(C11) DT(B2):DA(C10) DG(B3):DC(C9) DA(B4):DT(C8) DA(B5):DT(C7) DT(B6):DA(C6) DG(B7):DC(C5) DA(B8):DT(C4) DA(B9):DT(C3) DA(B10):DT(C2) DA(B11):DT(C1) DT(F1):DA(E11) DT(F2):DA(E10) DT(F3):DA(E9) DT(F4):DA(E8) DC(F5):DG(E7) DA(F6):DT(E6) DT(F7):DA(E5) DT(F8):DA(E4) DC(F9):DG(E3) DA(F10):DT(E2) DT(F11):DA(E1) chainA ( 4) ARG202 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ASN205 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) PHE207 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) MET208 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG215 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASP226 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN227 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG228 0 0 1 5 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER231 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ASN271 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 ( 7) ASN205 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 ( 9) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 ( 10) MET208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 10 0 0 0 0 0 0 ( 17) ARG215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 ( 28) ASP226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 29) ASN227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 30) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 15 2 0 0 ( 33) SER231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 ( 73) ASN271 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence hirRpmNaFMifskrhRalvhqrhpnqDNRtvSkilgewwyalgpkekqkyhdlafqvkeahfkahpdwkwcNk/hirRpmNaFMifskrhRalvhqrhpnqDNRtvSkilgewwyalgpkekqkyhdlafqvkeahfkahpdwkwcNk >6jrp_D:HMG-box; title=CRYSTAL STRUCTURE OF CIC-HMG-ETV5-DNA COMPLEX organism=Homo sapiens DNA sequence DA(E1):DT(F11) DT(E2):DA(F10) DG(E3):DC(F9) DA(E4):DT(F8) DA(E5):DT(F7) DT(E6):DA(F6) DG(E7):DC(F5) DA(E8):DT(F4) DA(E9):DT(F3) DA(E10):DT(F2) DA(E11):DT(F1) DT(C1):DA(B11) DT(C2):DA(B10) DT(C3):DA(B9) DT(C4):DA(B8) DC(C5):DG(B7) DA(C6):DT(B6) DT(C7):DA(B5) DT(C8):DA(B4) DC(C9):DG(B3) DA(C10):DT(B2) DT(C11):DA(B1) chainD ( 4) ARG202 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ASN205 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) PHE207 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) MET208 0 0 0 0 0 0 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG215 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASP226 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN227 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG228 0 0 2 15 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER231 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ASN271 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hirRpmNaFMifskrhRalvhqrhpnqDNRtvSkilgewwyalgpkekqkyhdlafqvkeahfkahpdwkwcNk >6jrp_GJ:HMG-box; title=CRYSTAL STRUCTURE OF CIC-HMG-ETV5-DNA COMPLEX organism=Homo sapiens DNA sequence DA(H1):DT(I11) DT(H2):DA(I10) DG(H3):DC(I9) DA(H4):DT(I8) DA(H5):DT(I7) DT(H6):DA(I6) DG(H7):DC(I5) DA(H8):DT(I4) DA(H9):DT(I3) DA(H10):DT(I2) DA(H11):DT(I1) DT(L1):DA(K11) DT(L2):DA(K10) DT(L3):DA(K9) DT(L4):DA(K8) DC(L5):DG(K7) DA(L6):DT(K6) DT(L7):DA(K5) DT(L8):DA(K4) DC(L9):DG(K3) DA(L10):DT(K2) DT(L11):DA(K1) chainG ( 4) ARG202 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ASN205 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) PHE207 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) MET208 0 0 0 0 0 0 11 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG215 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ASP226 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN227 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG228 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER231 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ASN271 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 4) ARG202 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 7) ASN205 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 ( 9) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 ( 10) MET208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 18 0 0 0 0 0 0 ( 13) SER211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 17) ARG215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 ( 28) ASP226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 29) ASN227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 ( 30) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 2 1 0 0 ( 33) SER231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 ( 71) TRP269 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 ( 73) ASN271 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 prot.sequence hirRpmNaFMifskrhRalvhqrhpnqDNRtvSkilgewwyalgpkekqkyhdlafqvkeahfkahpdwkwcNk/hirRpmNaFMifSkrhRalvhqrhpnqDNRtvSkilgewwyalgpkekqkyhdlafqvkeahfkahpdwkWcNk >6jtq_B:Thiolase-like; title=RVD HA SPECIFICALLY CONTACTS 5MC THROUGH VAN DER WAALS INTERACTIONS organism=? DNA sequence DG(D-13):DC(C13) DA(D-12):DT(C12) DG(D-11):DC(C11) DA(D-10):DT(C10) DC(D-9):DG(C9) DG(D-8):DC(C8) DC(D-7):DG(C7) DG(D-6):5CM(C6) DA(D-5):DT(C5) DA(D-4):DT(C4) DG(D-3):DC(C3) DG(D-2):DC(C2) DG(D-1):DC(C1) DA(D0):DT(C0) DC(D1):DG(C-1) DA(D2):DT(C-2) chainB ( 3) TRP232 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 37) ARG266 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 ( 72) ASP301 0 0 0 0 0 0 0 0 0 0 0 2 9 11 0 0 (106) ASP335 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 (140) ASP369 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 (242) ALA471 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (276) ASN505 0 0 0 0 0 1 9 8 0 0 0 0 0 0 0 0 (310) ASP539 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 (344) ASN573 0 0 0 1 9 5 0 0 0 0 0 0 0 0 0 0 (412) ASP641 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mqWsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashAggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkklehhhh >6jul_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MSDPO4-DNA COMPLEX 1 organism=? DNA sequence DG(B841):DC(C873) DG(B842):DC(C872) DG(B843):DC(C871) DT(B844):DA(C870) DC(B845):DG(C869) DC(B846):DG(C868) DT(B847):DA(C867) DA(B848):DT(C866) DG(B849):DC(C865) chainA (287) ARG287 0 0 0 0 0 0 0 4 0 (339) ARG339 0 0 0 1 0 0 0 0 0 prot.sequence mtkwvlhvdldqflasvelrrrpdlrgqpvivggsgdpseprkvvtcasyearefgvhagmplraaarrcpdatflpsdpaaydeaseqvmgllrdlghplevwgwdeaylgadlpdesdpvevaerirtvvaaetglscsvgisdnkqrakvatgfakpagiyvlteanwmtvmgdrppdalwgvgpkttkklaamgittvadlavtdpsvlttafgpstglwllllakgggdtevssepwvprsrshvvtfpqdlterremdsavrdlalqtlaeiveqgrivtRvavtvrtstfytrtkirklpapstdagqivdtalavldqfeldrpvrllgvRlelamddv >6jum_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MSDPO4-DNA COMPLEX 2 organism=? DNA sequence DT(H866):DA(G848) DA(H867):DT(G847) DG(H868):DC(G846) DG(H869):DC(G845) DA(H870):DT(G844) DC(H871):DG(G843) DC(H872):DG(G842) DC(H873):DG(G841) chainF (287) ARG287 2 0 0 0 0 0 0 0 prot.sequence mtkwvlhvdldqflasvelrrrpdlrgqpvivggsgdpseprkvvttasyearefgvhagmplraaarrcpdatflpsdpaaydeaseqvmgllrdlghplevwgwdeaylgadlpdesdpvevaerirtvvaaetglscsvgisdnkqrakvatgfakpagiyvlteanwmtvmgdrppdalwgvgpkttkklaamgittvadlavtdpsvlttafgpstglwllllakgggdtevssepwvprsrshvvtfpqdlterremdsavrdlalqtlaeiveqgrivtRvavtvrtstfytrtkirklpapstdagqivdtalavldqfeldrpvrllgvrlelamddv >6jun_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MSDPO4-DNA COMPLEX 3 organism=? DNA sequence DG(G841):DC(H873) DG(G842):DC(H872) DG(G843):DC(H871) DT(G844):DA(H870) DC(G845):DG(H869) DC(G846):DG(H868) DT(G847):DA(H867) DA(G848):DT(H866) chainF (287) ARG287 0 0 0 0 0 0 0 3 (339) ARG339 0 0 2 3 0 0 0 0 prot.sequence mtkwvlhvdldqfyasvelrrrpdlrgqpvivggsgdpseprkvvttasyearefgvhagmplraaarrcpdatflpsdpaaydeaseqvmgllrdlghplevwgwdeaylgadlpdesdpvevaerirtvvaaetglscsvgisdnkqrakvatgfakpagiyvlteanwmtvmgdrppdalwgvgpkttkklaamgittvadlavtdpsvlttafgpstglwllllakgggdtevssepwvprsrshvvtfpqdlterremdsavrdlalqtlaeiveqgrivtRvavtvrtstfytrtkirklpapstdagqivdtalavldqfeldrpvrllgvRlelamddv >6juo_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MSDPO4-DNA COMPLEX 4 organism=? DNA sequence DC(C864):DG(B850) DC(C865):DG(B849) DT(C866):DA(B848) DA(C867):DT(B847) DG(C868):DC(B846) DG(C869):DC(B845) DA(C870):DT(B844) DC(C871):DG(B843) DC(C872):DG(B842) DC(C873):DG(B841) chainA (287) ARG287 0 0 4 0 0 0 0 0 0 0 (339) ARG339 0 0 0 0 0 0 3 2 0 0 prot.sequence mtkwvlhvdldqfyasvelrrrpdlrgqpvivggsgdpseprkvvtcasyearefgvhagmplraaarrcpdatflpsdpaaydeaseqvmgllrdlghplevwgwdeaylgadlpdesdpvevaerirtvvaaetglscsvgisdnkqrakvatgfakpagiyvlteanwmtvmgdrppdalwgvgpkttkklaamgittvadlavtdpsvlttafgpstglwllllakgggdtevssepwvprsrshvvtfpqdlterremdsavrdlalqtlaeiveqgrivtRvavtvrtstfytrtkirklpapstdagqivdtalavldqfeldrpvrllgvRlelamddv >6jup_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MUTANT POLIV-DNA INCOMING NUCLEOTIDE COMPLEX organism=ESCHERICHIA COLI DNA sequence DG(B841):DC(C873) DG(B842):DC(C872) DG(B843):DC(C871) DT(B844):DA(C870) DC(B845):DG(C869) DC(B846):DG(C868) DT(B847):DA(C867) DA(B848):DT(C866) DG(B849):DC(C865) DG(B850):DC(C864) DA(B851):DT(C863) DC(B852):DG(C862) DC(B853):DG(C861) DC(B854):DG(C860) chainA (247) GLU246 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG285 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (300) THR299 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence gsrkiihvdmdcfaaavemrdnpalrdipiaiggsrerrgviscanyparkfgvrsamptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvErtmaedihhwseceaiierlypelerrlakvkpdlliaRqgvklkfddfqqtTqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >6juq_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MUTANT POLIV-DNA INCOMING NUCLEOTIDE COMPLEX 2 organism=ESCHERICHIA COLI DNA sequence DG(C860):DC(B854) DG(C861):DC(B853) DG(C862):DC(B852) DT(C863):DA(B851) DC(C864):DG(B850) DC(C865):DG(B849) DT(C866):DA(B848) DA(C867):DT(B847) DG(C868):DC(B846) DG(C869):DC(B845) DA(C870):DT(B844) DC(C871):DG(B843) DC(C872):DG(B842) DC(C873):DG(B841) chainA (299) THR299 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence srkiihvdmdcfaaavemrdnpalrdipiaiggsrerrgviscanyparkfgvrsamptgmalklcphltllpgrfdaykeasnhireifsrytsrieplsldeayldvtdsvhchgsatliaqeirqtifnelqltasagvapvkflakiasdmnkpngqfvitpaevpaflqtlplakipgvgkvsaakleamglrtcgdvqkcdlvmllkrfgkfgrilwersqgiderdvnserlrksvgvertmaedihhwseceaiierlypelerrlakvkpdlliarqgvklkfddfqqtTqehvwprlnkadliatarktwderrggrgvrlvglhvtlldp >6jur_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MSDPO4-DNA COMPLEX 5 organism=? DNA sequence DG(G841):DC(H873) DG(G842):DC(H872) DG(G843):DC(H871) DT(G844):DA(H870) DC(G845):DG(H869) DC(G846):DG(H868) DT(G847):DA(H867) DA(G848):DT(H866) chainF (287) ARG287 0 0 0 0 0 0 0 3 (339) ARG339 0 0 2 5 0 0 0 0 prot.sequence mtkwvlhvdldqfyasvelrrrpdlrgqpvivggsgdpseprkvvtcasyearefgvhagmplraaarrcpdatflpsdpaaydeaseqvmgllrdlghplevwgwdeaylgadlpdesdpvevaerirtvvaaetglscsvgisdnkqrakvatgfakpagiyvlteanwmtvmgdrppdalwgvgpkttkklaamgittvadlavtdpsvlttafgpstglwllllakgggdtevssepwvprsrshvvtfpqdlterremdsavrdlalqtlaeiveqgrivtRvavtvrtstfytrtkirklpapstdagqivdtalavldqfeldrpvrllgvRlelamddv >6jus_F:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=MSDPO4-DNA COMPLEX 6 organism=? DNA sequence DG(G841):DC(H873) DG(G842):DC(H872) DG(G843):DC(H871) DT(G844):DA(H870) DC(G845):DG(H869) DC(G846):DG(H868) DT(G847):DA(H867) DA(G848):DT(H866) DG(G849):DC(H865) chainF (287) ARG287 0 0 0 0 0 0 0 4 0 (339) ARG339 0 0 0 1 0 0 0 0 0 prot.sequence mtkwvlhvdldqflasvelrrrpdlrgqpvivggsgdpseprkvvtcasyearefgvhagmplraaarrcpdatflpsdpaaydeaseqvmgllrdlghplevwgwdeaylgadlpdesdpvevaerirtvvaaetglscsvgisdnkqrakvatgfakpagiyvlteanwmtvmgdrppdalwgvgpkttkklaamgittvadlavtdpsvlttafgpstglwllllakgggdtevssepwvprsrshvvtfpqdlterremdsavrdlalqtlaeiveqgrivtRvavtvrtstfytrtkirklpapstdagqivdtalavldqfeldrpvrllgvRlelamddv >6jvz_A:Thiolase-like; title=RVD HA SPECIFICALLY CONTACTS 5MC THROUGH VAN DER WAALS INTERACTIONS organism=Xanthomonas campestris pv. armoraciae DNA sequence DT(I-2):DA(J2) DG(I-1):DC(J1) DT(I0):DA(J0) DC(I1):DG(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DT(I4):DA(J-4) DT(I5):DA(J-5) 5CM(I6):DG(J-6) DG(I7):DC(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DT(I10):DA(J-10) DC(I11):DG(J-11) DT(I12):DA(J-12) DC(I13):DG(J-13) chainA ( 37) ARG266 0 0 0 0 2 11 7 0 0 0 0 0 0 0 0 0 ( 72) ASP301 0 0 8 7 2 0 0 0 0 0 0 0 0 0 0 0 (106) ASP335 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 (140) ASP369 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 (242) ALA471 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (276) ASN505 0 0 0 0 0 0 0 0 4 9 1 0 0 0 0 0 (310) ASP539 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 (344) ASN573 0 0 0 0 0 0 0 0 0 0 4 9 2 0 0 0 (412) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 prot.sequence mqwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashAggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkklehhhh >6jw0_A:Thiolase-like; title=UNIVERSAL RVD R* ACCOMMODATES CYTOSINE VIA WATER-MEDIATED INTERACTIONS organism=Xanthomonas campestris pv. armoraciae DNA sequence DT(I-2):DA(J2) DG(I-1):DC(J1) DT(I0):DA(J0) DC(I1):DG(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DT(I4):DA(J-4) DT(I5):DA(J-5) DC(I6):DG(J-6) DG(I7):DC(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DT(I10):DA(J-10) DC(I11):DG(J-11) DT(I12):DA(J-12) DC(I13):DG(J-13) chainA ( 37) ARG266 0 0 0 0 2 12 7 0 0 0 0 0 0 0 0 0 ( 72) ASP301 0 0 8 7 2 0 0 0 0 0 0 0 0 0 0 0 (106) ASP335 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 (140) ASP369 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 (241) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (275) ASN504 0 0 0 0 0 0 0 0 12 9 0 0 0 0 0 0 (309) ASP538 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (343) ASN572 0 0 0 0 0 0 0 0 0 0 5 8 3 0 0 0 (411) ASP640 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 prot.sequence mqwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasRggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkklehhhh >6jw1_B:Thiolase-like; title=UNIVERSAL RVD R* ACCOMMODATES 5MC VIA WATER-MEDIATED INTERACTIONS organism=Xanthomonas campestris pv. armoraciae DNA sequence DT(C-2):DA(D2) DG(C-1):DC(D1) DT(C0):DA(D0) DC(C1):DG(D-1) DC(C2):DG(D-2) DC(C3):DG(D-3) DT(C4):DA(D-4) DT(C5):DA(D-5) 5CM(C6):DG(D-6) DG(C7):DC(D-7) DC(C8):DG(D-8) DG(C9):DC(D-9) DT(C10):DA(D-10) DC(C11):DG(D-11) DT(C12):DA(D-12) DC(C13):DG(D-13) chainB ( 37) ARG266 0 0 0 0 2 14 8 0 0 0 0 0 0 0 0 0 ( 72) ASP301 0 0 8 7 2 0 0 0 0 0 0 0 0 0 0 0 (106) ASP335 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 (140) ASP369 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 (275) ASN504 0 0 0 0 0 0 0 0 16 9 0 0 0 0 0 0 (309) ASP538 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 (343) ASN572 0 0 0 0 0 0 0 0 0 0 4 9 2 0 0 0 (411) ASP640 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 prot.sequence mqwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasrggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkklehhhh >6jw2_A:Thiolase-like; title=UNIVERSAL RVD R* ACCOMMODATES 5HMC VIA WATER-MEDIATED INTERACTIONS organism=Xanthomonas campestris pv. armoraciae DNA sequence DT(I-2):DC(J1) DG(I-1):DA(J0) DT(I0):DG(J-1) DC(I1):DG(J-2) DC(I2):DG(J-3) DC(I3):DA(J-4) DT(I4):DA(J-5) DT(I5):DG(J-6) DG(I7):DC(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DT(I10):DA(J-10) DC(I11):DG(J-11) DT(I12):DA(J-12) DC(I13):DG(J-13) DT(I14):DA(J-14) chainA ( 37) ARG266 0 0 0 1 10 4 0 0 0 0 0 0 0 0 0 0 ( 72) ASP301 0 0 7 8 1 0 0 0 0 0 0 0 0 0 0 0 (106) ASP335 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (140) ASP369 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (275) ASN504 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 (309) ASP538 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (343) ASN572 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 (411) ASP640 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 prot.sequence mqwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasrggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkkleh >6jw3_B:Thiolase-like; title=DEGENERATE RVD RG FORMS A DISTINCT LOOP CONFORMATION organism=Xanthomonas campestris pv. armoraciae DNA sequence DT(C-2):DA(D2) DG(C-1):DC(D1) DT(C0):DA(D0) DC(C1):DG(D-1) DC(C2):DG(D-2) DC(C3):DG(D-3) DT(C4):DA(D-4) DT(C5):DA(D-5) 5CM(C6):DG(D-6) DG(C7):DC(D-7) DC(C8):DG(D-8) DG(C9):DC(D-9) DT(C10):DA(D-10) DC(C11):DG(D-11) DT(C12):DA(D-12) DC(C13):DG(D-13) DT(C14):DA(D-14) chainB ( 37) ARG266 0 0 0 0 2 10 3 0 0 0 0 0 0 0 0 0 0 ( 72) ASP301 0 0 7 7 1 0 0 0 0 0 0 0 0 0 0 0 0 (106) ASP335 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (140) ASP369 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (276) ASN505 0 0 0 0 0 0 0 0 13 8 0 0 0 0 0 0 0 (310) ASP539 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 (344) ASN573 0 0 0 0 0 0 0 0 0 0 4 9 1 0 0 0 0 (412) ASP641 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 prot.sequence mqwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasrgggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkklehhhh >6jw4_E:Thiolase-like; title=DEGENERATE RVD RG FORMS A DISTINCT LOOP CONFORMATION organism=Xanthomonas campestris pv. armoraciae DNA sequence DT(F-2):DC(G1) DG(F-1):DA(G0) DT(F0):DG(G-1) DC(F1):DG(G-2) DC(F2):DG(G-3) DC(F3):DA(G-4) DT(F4):DA(G-5) DT(F5):DG(G-6) DG(F7):DC(G-7) DC(F8):DG(G-8) DG(F9):DC(G-9) DT(F10):DA(G-10) DC(F11):DG(G-11) DT(F12):DA(G-12) DC(F13):DG(G-13) DT(F14):DA(G-14) chainE ( 37) ARG266 0 0 0 1 10 2 0 0 0 0 0 0 0 0 0 0 ( 72) ASP301 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 (106) ASP335 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (140) ASP369 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (276) ASN505 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 (310) ASP539 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 (344) ASN573 0 0 0 0 0 0 0 0 0 5 9 1 0 0 0 0 (412) ASP641 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 prot.sequence mqwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasrgggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkkl >6jw5_E:Thiolase-like; title=RVD Q* RECOGNIZES 5HMC THROUGH WATER-MEDIATED H BONDS organism=Xanthomonas campestris pv. armoraciae DNA sequence DT(F-2):DC(G1) DG(F-1):DA(G0) DT(F0):DG(G-1) DC(F1):DG(G-2) DC(F2):DG(G-3) DC(F3):DA(G-4) DT(F4):DA(G-5) DT(F5):DG(G-6) DG(F7):DC(G-7) DC(F8):DG(G-8) DG(F9):DC(G-9) DT(F10):DA(G-10) DC(F11):DG(G-11) DT(F12):DA(G-12) DC(F13):DG(G-13) DT(F14):DA(G-14) chainE ( 37) ARG266 0 0 0 1 12 7 0 0 0 0 0 0 0 0 0 0 ( 72) ASP301 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 (106) ASP335 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 (140) ASP369 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (275) ASN504 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 (309) ASP538 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 (343) ASN572 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 (411) ASP640 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 prot.sequence mqwsgaralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasqggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkkleh >6jxd_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN NUCLEOSOME CORE PARTICLE WITH COHESIVE END DNA TERMINI organism=HOMO SAPIENS DNA sequence DC(J-71):DG(I71) DA(J-70):DT(I70) DT(J-69):DA(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DG(J-64):DC(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DC(J-56):DG(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DC(J-32):DG(I32) DG(J-31):DC(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DA(J69):DT(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainF chainG ( 5) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/rkaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkrsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/krHRkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktRssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkrsRkesysiyvykvlkqvhpdtgisskAmgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6jxd_G:Histone-fold; title=HUMAN NUCLEOSOME CORE PARTICLE WITH COHESIVE END DNA TERMINI organism=HOMO SAPIENS DNA sequence DC(J-71):DG(I71) DA(J-70):DT(I70) DT(J-69):DA(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DG(J-64):DC(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DC(J-56):DG(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DC(J-32):DG(I32) DG(J-31):DC(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DA(J69):DT(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) chainG ( 5) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaktRssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >6jyl_E:Histone-fold; title=THE CROSSLINKED COMPLEX OF ISWI-NUCLEOSOME IN THE ADP.BEF-BOUND STATE organism=? DNA sequence DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainE ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >6jyw_AB:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE TRANSCRIPTION REGULATOR CADR N81M MUTANT FROM P. PUTIDA IN COMPLEX WITH CADMIUM(II) AND DNA organism=PSEUDOMONAS PUTIDA DNA sequence DA(C2):DT(D22) DC(C3):DG(D21) DC(C4):DG(D20) DC(C5):DG(D19) DT(C6):DA(D18) DA(C7):DT(D17) DT(C8):DA(D16) DA(C9):DT(D15) DG(C10):DC(D14) DT(C11):DA(D13) DG(C12):DC(D12) DG(C13):DC(D11) DC(C14):DG(D10) DT(C15):DA(D9) DA(C16):DT(D8) DC(C17):DG(D7) DA(C18):DT(D6) DG(C19):DC(D5) DG(C20):DC(D4) DG(C21):DC(D3) DT(C22):DA(D2) chainA ( 15) GLU15 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 15) GLU15 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 prot.sequence mkigelakatdcavEtiRYyereqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddscgsvmalidehiehvqaridglvalqeqlvelrrrcnecailqqletngavsvpetshvgrsh/mkigelakatdcavEtiRYyereqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddscgsvmalidehiehvqaridglvalqeqlvelrrrcnecailqqletngavsvpet >6jyw_B:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE TRANSCRIPTION REGULATOR CADR N81M MUTANT FROM P. PUTIDA IN COMPLEX WITH CADMIUM(II) AND DNA organism=? DNA sequence DA(C2):DT(D22) DC(C3):DG(D21) DC(C4):DG(D20) DC(C5):DG(D19) DT(C6):DA(D18) DA(C7):DT(D17) DT(C8):DA(D16) DA(C9):DT(D15) DG(C10):DC(D14) DT(C11):DA(D13) DG(C12):DC(D12) DG(C13):DC(D11) DC(C14):DG(D10) DT(C15):DA(D9) DA(C16):DT(D8) DC(C17):DG(D7) DA(C18):DT(D6) DG(C19):DC(D5) DG(C20):DC(D4) DG(C21):DC(D3) DT(C22):DA(D2) chainB ( 15) GLU15 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 ( 19) TYR19 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 prot.sequence mkigelakatdcavEtiRYyereqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddscgsvmalidehiehvqaridglvalqeqlvelrrrcnecailqqletngavsvpet >6k1i_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN NUCLEOSOME CORE PARTICLE WITH GAMMAH2A.X VARIANT organism=HOMO SAPIENS DNA sequence DC(J-71):DG(I71) DA(J-70):DT(I70) DT(J-69):DA(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DG(J-64):DC(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DC(J-56):DG(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DC(J-32):DG(I32) DG(J-31):DC(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DA(J69):DT(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 5) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) LYS27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaksrssraglqfpvgrvhrllrkghyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpkktsa/rkrsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaksRssraglqfpvgrvhrllrkghyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpkktsa/rKrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6k1i_G:Histone-fold; title=HUMAN NUCLEOSOME CORE PARTICLE WITH GAMMAH2A.X VARIANT organism=HOMO SAPIENS DNA sequence DC(I-71):DG(J71) DA(I-70):DT(J70) DT(I-69):DA(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DC(I31):DG(J-31) DG(I32):DC(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DG(I56):DC(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DC(I64):DG(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DA(I69):DT(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) chainG ( 5) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaksRssraglqfpvgrvhrllrkghyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpkktsa >6k1j_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN NUCLEOSOME CORE PARTICLE WITH H2A.X VARIANT organism=HOMO SAPIENS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DA(J-56):DT(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DT(J-35):DA(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DT(J-25):DA(I25) DC(J-24):DG(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DT(J-21):DA(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DG(J-15):DC(I15) DG(J-14):DC(I14) DC(J-13):DG(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ILE36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaksrssraglqfpvgrvhrllrkGhyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpkktsatv/rkrsrkesysiyvykvlkqvhpdtGisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaksrssraglqfpvgrvhrllrkghyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpkktsa/rsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6k1k_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN NUCLEOSOME CORE PARTICLE WITH H2A.X S139E VARIANT organism=HOMO SAPIENS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DC(I-68):DG(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DG(I68):DC(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) VAL124 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aksrssraglqfpvgrvhrllrkghyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpkktsatV/rkrsrkesysiyvykvlkqvhpdtgissKamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRyrpgtvalreirryqkstelliRklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaRakaksrssraglqfpvgrvhrllrkghyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpkktsa/rkRsrkesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6k1k_C:Histone-fold; title=HUMAN NUCLEOSOME CORE PARTICLE WITH H2A.X S139E VARIANT organism=HOMO SAPIENS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DG(J68):DC(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) VAL124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 prot.sequence aksrssraglqfpvgrvhrllrkghyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpkktsatV >6k1p_D:Histone-fold; title=THE COMPLEX OF ISWI-NUCLEOSOME IN THE ADP.BEF-BOUND STATE organism=? DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) chainD ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6k3z_B: title=CRYSTAL STRUCTURE OF DCAS9 IN COMPLEX WITH SGRNA AND DNA (TGA PAM) organism=Streptococcus pyogenes serotype M1 DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DT(C4):DA(D9) DA(C5):DT(D8) DT(C6):DA(D7) DC(C7):DG(D6) DA(C8):DT(D5) chainB (1063) LYS1107 0 0 0 0 2 5 2 (1175) GLU1219 0 0 0 0 0 1 0 (1284) ARG1333 0 0 0 0 1 11 10 (1286) ARG1335 0 0 1 5 11 8 0 prot.sequence kysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarnsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdgkatakyffysnimnffkteikrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsq >6k4p_B: title=CRYSTAL STRUCTURE OF XCAS9 IN COMPLEX WITH SGRNA AND DNA (TGG PAM) organism=Streptococcus pyogenes serotype M1 DNA sequence DC(C1):DG(D12) DA(C2):DT(D11) DA(C3):DT(D10) DT(C4):DA(D9) DA(C5):DT(D8) DC(C6):DG(D7) DC(C7):DG(D6) DA(C8):DT(D5) chainB (1067) LYS1107 0 0 0 0 0 3 5 2 (1289) ARG1333 0 0 0 0 0 2 12 15 (1291) ARG1335 0 0 0 0 6 10 9 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknrilylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedtklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmiklydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngiiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfekvvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgdqkkaivdllfktnrkvtvkqlkedyfkkieefdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfiqlihddsltfkediqkaqvsslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarqknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvyggkatakyffysnimnffkteikrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagvlqkgnelalpskyvnflylashyekpedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlgg >6k4q_B: title=CRYSTAL STRUCTURE OF XCAS9 IN COMPLEX WITH SGRNA AND DNA (CGG PAM) organism=Streptococcus pyogenes serotype M1 DNA sequence DC(D5):DG(C8) DG(D6):DC(C7) DG(D7):DC(C6) DT(D8):DA(C5) DA(D9):DT(C4) DT(D10):DA(C3) DT(D11):DA(C2) DG(D12):DC(C1) chainB (1067) LYS1107 2 5 0 0 0 0 0 0 (1289) ARG1333 9 12 1 0 0 0 0 0 (1291) ARG1335 0 13 12 6 0 0 0 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknrilylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedtklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmiklydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngiiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfekvvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgdqkkaivdllfktnrkvtvkqlkedyfkkieefdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfiqlihddsltfkediqkaqvsslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarqknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvyggkatakyffysnimnffkteikrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagvlqkgnelalpskyvnflylashyekpedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlgg >6k4s_B: title=CRYSTAL STRUCTURE OF XCAS9 IN COMPLEX WITH SGRNA AND DNA (TGC PAM) organism=Streptococcus pyogenes serotype M1 DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DT(C4):DA(D9) DA(C5):DT(D8) DG(C6):DC(D7) DC(C7):DG(D6) DA(C8):DT(D5) chainB (1060) LYS1107 0 0 0 0 0 4 5 (1276) ARG1333 0 0 0 0 1 7 17 (1278) ARG1335 0 0 6 5 2 0 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknrilylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedtklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmiklydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngiiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfekvvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgdqkkaivdllfktnrkvtvkqlkedyfkkieefdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfiqlihddsltfkediqkaqslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarsrermkrieegikelgsqilkehpventqlqneklylyylgrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdgkatakyffysnimnffkteitkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagvlqkgnelalpskyvnflylashneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsql >6k4u_B: title=CRYSTAL STRUCTURE OF XCAS9 IN COMPLEX WITH SGRNA AND DNA (TGA PAM) organism=Streptococcus pyogenes serotype M1 DNA sequence DA(C2):DT(D11) DA(C3):DT(D10) DT(C4):DA(D9) DA(C5):DT(D8) DT(C6):DA(D7) DC(C7):DG(D6) DA(C8):DT(D5) chainB (1064) LYS1107 0 0 0 0 0 6 4 (1280) ARG1333 0 0 0 0 1 7 13 (1282) ARG1335 0 0 5 3 0 0 0 prot.sequence mdkkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedtklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmiklydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngiiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfekvvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgdqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfiqlihddsltfkediqkaqdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarnsrermkrieegikelgsqilkehpntqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdgkatakyffysnimnffkteitkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagvlqkgnelalpskyvnflylashneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsql >6k4y_CDFIM: title=CRYOEM STRUCTURE OF SIGMA APPROPRIATION COMPLEX organism=ENTEROBACTERIA PHAGE T4 / ESCHERICHIA COLI K-12 DNA sequence DC(T1):DG(N48) DC(T2):DT(N47) DT(T3):DC(N46) DG(T4):DG(N45) DC(T5):DA(N44) DA(T6):DG(N43) DT(T7):DG(N42) DC(T8):DG(N41) DC(T9):DT(N40) DG(T10):DA(N39) DT(T11):DA(N38) DG(T12):DT(N37) DA(T13):DA(N36) DA(T27):DT(N35) DA(T28):DT(N34) DC(T29):DG(N33) DC(T30):DG(N32) DA(T31):DT(N31) DT(T32):DA(N30) DA(T33):DT(N29) DT(T34):DA(N28) DG(T35):DC(N27) DG(T36):DC(N26) DA(T37):DT(N25) DT(T38):DA(N24) DT(T39):DA(N23) DA(T40):DT(N22) DT(T41):DA(N21) DT(T42):DA(N20) DA(T43):DT(N19) DA(T44):DT(N18) DG(T45):DC(N17) DC(T46):DG(N16) DA(T47):DT(N15) DA(T48):DT(N14) DA(T49):DT(N13) DG(T50):DC(N12) DC(T51):DG(N11) DT(T52):DA(N10) DT(T53):DA(N9) DC(T54):DG(N8) DT(T55):DA(N7) DT(T56):DA(N6) DT(T57):DA(N5) DT(T58):DA(N4) DC(T59):DG(N3) chainC (150) ARG151 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (299) ARG314 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) ASP96 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL98 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 10 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ARG385 0 0 0 0 0 0 0 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) LEU386 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) PHE401 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) LYS426 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) SER428 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) THR429 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR432 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI ( 50) ASN52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 53) ARG55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainM ( 96) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 ( 99) ARG101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 14 2 0 0 0 0 0 0 0 0 (133) ARG135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ARG150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) TYR165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ASN189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) TYR191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreragfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/eigrttDpVRmyMremgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvddpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlRLvisiakkytnrglqFldliqegniglmkavdkFEyrRgYKfSTYaTWWirQaiTRsiadqartiripVHmiEtinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelplraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtrerirqieakalrklrhpsrsevlrsfl/knidtvreiitvasilikfsredivenranfiaflneigvthegrklnqNsfRkivseltqedkktlidefnegfegvyrylemytnk/kvtyiikasndvlnektatilitiakkdfitaaevrevhpdlgnavvnsnigvlikkglveksgdgliitgeaqdiisnaatlyaqenapellkkRatRkareitsdmeedkdlmlklldkngfvlkkveiyRsnylailekrtngiRnfeinnngnmrifgYkmmehhiqkftdigmsckiakNgNvYldikrsaenieavitvasel >6k4y_I:Anti-sigma_factor_AsiA; title=CRYOEM STRUCTURE OF SIGMA APPROPRIATION COMPLEX organism=ENTEROBACTERIA PHAGE T4 DNA sequence DC(T1):DG(N48) DC(T2):DT(N47) DT(T3):DC(N46) DG(T4):DG(N45) DC(T5):DA(N44) DA(T6):DG(N43) DT(T7):DG(N42) DC(T8):DG(N41) DC(T9):DT(N40) DG(T10):DA(N39) DT(T11):DA(N38) DG(T12):DT(N37) DA(T13):DA(N36) DA(T27):DT(N35) DA(T28):DT(N34) DC(T29):DG(N33) DC(T30):DG(N32) DA(T31):DT(N31) DT(T32):DA(N30) DA(T33):DT(N29) DT(T34):DA(N28) DG(T35):DC(N27) DG(T36):DC(N26) DA(T37):DT(N25) DT(T38):DA(N24) DT(T39):DA(N23) DA(T40):DT(N22) DT(T41):DA(N21) DT(T42):DA(N20) DA(T43):DT(N19) DA(T44):DT(N18) DG(T45):DC(N17) DC(T46):DG(N16) DA(T47):DT(N15) DA(T48):DT(N14) DA(T49):DT(N13) DG(T50):DC(N12) DC(T51):DG(N11) DT(T52):DA(N10) DT(T53):DA(N9) DC(T54):DG(N8) DT(T55):DA(N7) DT(T56):DA(N6) DT(T57):DA(N5) DT(T58):DA(N4) DC(T59):DG(N3) chainI ( 50) ASN52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 53) ARG55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence knidtvreiitvasilikfsredivenranfiaflneigvthegrklnqNsfRkivseltqedkktlidefnegfegvyrylemytnk >6k57_B: title=CRYSTAL STRUCTURE OF DCAS9 IN COMPLEX WITH SGRNA AND DNA (CGA PAM) organism=Streptococcus pyogenes serotype M1 DNA sequence DC(C1):DG(D12) DA(C2):DT(D11) DA(C3):DT(D10) DT(C4):DA(D9) DA(C5):DT(D8) DT(C6):DA(D7) DC(C7):DG(D6) DG(C8):DC(D5) chainB (1062) LYS1107 0 0 0 0 0 2 6 2 (1174) GLU1219 0 0 0 0 0 0 1 0 (1284) ARG1333 0 0 0 0 0 2 10 9 (1286) ARG1335 0 0 0 0 4 10 7 0 prot.sequence kysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarnsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdgkatakyffysnimnffkteikrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashygspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsq >6kbz_B:BB1717-like; title=CRYSTAL STRUCTURE OF YEDK WITH SSDNA CONTAINING A TETRAHYDROFURAN ABASIC SITE organism=Escherichia coli DNA sequence DG(E3):DC(A7) DA(E4):DT(A6) DT(E5):DT(A5) DT(E6):DA(A4) DC(E7):DG(A3) chainB ( 3) ARG4 0 0 0 4 11 ( 38) ALA39 0 0 0 0 2 ( 39) PRO40 0 0 0 0 22 ( 73) ILE74 0 0 0 0 3 (210) VAL211 0 0 0 2 5 prot.sequence cgRfaqsqtredylallaedierdipydpepigrynvAPgtkvlllserdehlhldpvfwgyapgwwdkpplInarvetaatsrmfkplwqhgraicfadgwfewkkegdkkqpffiyradgqpifmaaigstpfergdeaegflivtaaadqglvdihdrrplvlspeaarewmrqeisgkeaseiaasgcvpanqfswhpvsravgnVknqgaeliqpvlevlf >6kbz_BF:BB1717-like; title=CRYSTAL STRUCTURE OF YEDK WITH SSDNA CONTAINING A TETRAHYDROFURAN ABASIC SITE organism=Escherichia coli DNA sequence DG(E3):DC(A7) DA(E4):DT(A6) DT(E5):DT(A5) DT(E6):DA(A4) DC(E7):DG(A3) chainB ( 3) ARG4 0 0 0 4 11 ( 38) ALA39 0 0 0 0 2 ( 39) PRO40 0 0 0 0 22 ( 73) ILE74 0 0 0 0 3 (210) VAL211 0 0 0 2 5 chainF ( 3) ARG4 10 4 0 0 0 ( 38) ALA39 2 0 0 0 0 ( 39) PRO40 21 0 0 0 0 ( 73) ILE74 3 0 0 0 0 (210) VAL211 4 1 0 0 0 prot.sequence cgRfaqsqtredylallaedierdipydpepigrynvAPgtkvlllserdehlhldpvfwgyapgwwdkpplInarvetaatsrmfkplwqhgraicfadgwfewkkegdkkqpffiyradgqpifmaaigstpfergdeaegflivtaaadqglvdihdrrplvlspeaarewmrqeisgkeaseiaasgcvpanqfswhpvsravgnVknqgaeliqpvlevlf/cgRfaqsqtredylallaedierdipydpepigrynvAPgtkvlllserdehlhldpvfwgyapgwwdkpplInarvetaatsrmfkplwqhgraicfadgwfewkkegdkkqpffiyradgqpifmaaigstpfergdeaegflivtaaadqglvdihdrrplvlspeaarewmrqeisgkeaseiaasgcvpanqfswhpvsravgnVknqgaeliqpvlevlf >6kbz_DH:BB1717-like; title=CRYSTAL STRUCTURE OF YEDK WITH SSDNA CONTAINING A TETRAHYDROFURAN ABASIC SITE organism=Escherichia coli DNA sequence DG(C3):DC(G7) DA(C4):DT(G6) DT(C5):DT(G5) DT(C6):DA(G4) DC(C7):DG(G3) chainD ( 3) ARG4 11 4 0 0 0 ( 38) ALA39 2 0 0 0 0 ( 39) PRO40 22 0 0 0 0 ( 73) ILE74 3 0 0 0 0 (210) VAL211 4 2 0 0 0 chainH ( 3) ARG4 0 0 0 4 11 ( 34) ALA39 0 0 0 0 2 ( 35) PRO40 0 0 0 0 22 ( 69) ILE74 0 0 0 0 3 (206) VAL211 0 0 0 1 4 prot.sequence cgRfaqsqtredylallaedierdipydpepigrynvAPgtkvlllserdehlhldpvfwgyapgwwdkpplInarvetaatsrmfkplwqhgraicfadgwfewkkegdkkqpffiyradgqpifmaaigstpfergdeaegflivtaaadqglvdihdrrplvlspeaarewmrqeisgkeaseiaasgcvpanqfswhpvsravgnVknqgaeliqpvle/cgRfaqsqtredylallardipydpepigrynvAPgtkvlllserdehlhldpvfwgyapgwwdkpplInarvetaatsrmfkplwqhgraicfadgwfewkkegdkkqpffiyradgqpifmaaigstpfergdeaegflivtaaadqglvdihdrrplvlspeaarewmrqeisgkeaseiaasgcvpanqfswhpvsravgnVknqgaeliqpvlev >6kc7_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF NME1CAS9 IN COMPLEX WITH SGRNA AND TARGET DNA (ATATGATT PAM) IN SEED-BASE PARING STATE organism=Neisseria meningitidis 8013 DNA sequence DA(D1):DT(C11) DT(D2):DA(C10) DA(D3):DT(C9) DT(D4):DA(C8) DG(D5):DC(C7) DA(D6):DT(C6) DT(D7):DA(C5) DT(D8):DA(C4) DT(D9):DA(C3) DT(D10):DA(C2) DA(D11):DT(C1) chainA (725) MET844 1 0 0 0 0 0 0 0 0 0 0 (862) GLN981 0 0 0 0 0 0 2 11 4 0 0 (905) HIS1024 0 0 0 19 11 5 0 0 0 0 0 (908) THR1027 0 0 0 0 0 5 4 0 0 0 0 (910) ASN1029 0 0 0 0 0 1 2 0 0 0 0 prot.sequence sinyilgldigiasvgwamveideeenpirlidlgvrvferaevpktgdslamarrlarsvrrltrrrahrllrtrrllkregvlqaanfdenglikslpntpwqlraaaldrkltplewsavllhlikhrgylsqelgallkgvagnahalqtgdfrtpaelalnkfekesghirnqrsdyshtfsrkdlqaelillfekqkefgnphvsgglkegietllmtqrpalpkaakntytaerfiwltklnnlrileqgserpltdteratlmdepyrksktyaqarkllastlmemkayhaisrsplnlspelqdeigtafslfktdeditgrlkdriisfdkfvqiekiylppipadeirnpvvlralsqarkvingvvrrygsparihietarevgksfkdrkeiekrqeenrkdrekaaakfreyfpnfvgepkskdilklrlyeqqhgkclysgkeinlgrlnekgyveidaalpfsrtwddsfnnkvlvlgsenqnkgnqtpyeyfngkdnsrewqefkarvetsrfprskkqrillqkfdedgfkernlndtryvnrflcqfvadrmrltgkgkkrvfasngqitnllrgfwglrkvraendrhhaldavvvacstvamqqkitrfvrykemnafdgktidlhqkthfpqpweffaqevmirvfgkpdgkpefeeadtleklrtllaeklssrpeavheyvtplfvsrapnrkmsgqghMetvksakrldegvsvlrvpltqlklkdlekmvnrerepklyealkarleahkddpakafaepfykydkagnrtqqvkavrveqvqktgvwvrnhngiadnatmvrvdvfekgdkyylvpiyswqvakgilpdravvQgkdeedwqliddsfnfkfslhpndlvevitkkarmfgyfascHrgTgNinirihdldhkigkngilegigvktalsfqkyqidelgkeirpcrlkkrppvr >6kcs_A: title=CRYSTAL STRUCTURE OF HIRAN DOMAIN OF HLTF IN COMPLEX WITH DUPLEX DNA organism=Homo sapiens DNA sequence DT(B3) DG(B4) DT(B5) DA(B6) DC(B7) DG(B8) DT(B9) DA(B10) DC(B11) DA(B12) DG(B13) DT(B14) chainA ( 17) TYR72 0 0 0 0 0 0 0 0 0 0 48 0 ( 18) TYR73 0 0 0 0 0 0 0 0 0 0 9 1 ( 36) ASN91 0 0 0 0 0 0 0 0 0 0 0 8 ( 38) TYR93 0 0 0 0 0 0 0 0 0 0 0 36 ( 55) HIS110 0 0 0 0 0 0 0 0 0 0 5 7 ( 87) PHE142 0 0 0 0 0 0 0 0 0 23 0 0 ( 88) THR143 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence gsvlfgslrghvvglrYYtgvvnnnemvalqrdpnNpYdknaikvnnvngnqvgHlkkelagalayimdnklaqiegvvpfgannaFTmplhmtfwgkeenrkavsdqlkkhgfklg >6kda_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF HUMAN DNMT3B-DNMT3L IN COMPLEX WITH DNA CONTAINING CPGPG SITE organism=HOMO SAPIENS DNA sequence DA(F423):DT(E446) DA(F424):DT(E445) DT(F425):DA(E444) DT(F426):DA(E443) DG(F428):DC(E441) DG(F429):DC(E440) DA(F430):DT(E439) DA(F431):DT(E438) DA(F432):DT(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E432) DT(F438):DA(E431) DT(F439):DA(E430) DC(F440):DG(E429) DC(F441):DG(E428) DA(F443):DT(E426) DA(F444):DT(E425) DT(F445):DA(E424) DT(F446):DA(E423) chainA ( 87) ASN656 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) VAL657 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) PRO659 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) LYS777 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) SER778 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) ASN779 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 87) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 ( 88) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 ( 90) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (203) GLN772 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (208) LYS777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 (209) SER778 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (210) ASN779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 prot.sequence mrrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtittKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface/mrrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvQtittKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6kda_D:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF HUMAN DNMT3B-DNMT3L IN COMPLEX WITH DNA CONTAINING CPGPG SITE organism=HOMO SAPIENS DNA sequence DA(F423):DT(E446) DA(F424):DT(E445) DT(F425):DA(E444) DT(F426):DA(E443) DG(F428):DC(E441) DG(F429):DC(E440) DA(F430):DT(E439) DA(F431):DT(E438) DA(F432):DT(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E432) DT(F438):DA(E431) DT(F439):DA(E430) DC(F440):DG(E429) DC(F441):DG(E428) DA(F443):DT(E426) DA(F444):DT(E425) DT(F445):DA(E424) DT(F446):DA(E423) chainD ( 87) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 ( 88) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 ( 90) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (203) GLN772 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (208) LYS777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 (209) SER778 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (210) ASN779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 prot.sequence mrrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvQtittKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6kdb_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF HUMAN DNMT3B-DNMT3L IN COMPLEX WITH DNA CONTAINING CPGPT SITE organism=HOMO SAPIENS DNA sequence DC(E423):DG(F446) DA(E424):DT(F445) DT(E425):DA(F444) DG(E426):DC(F443) DG(E428):DC(F441) DT(E430):DA(F439) DC(E431):DG(F438) DT(E432):DA(F437) DA(E433):DT(F436) DA(E434):DT(F435) DT(E435):DA(F434) DT(E436):DA(F433) DA(E437):DT(F432) DG(E438):DC(F431) DA(E439):DT(F430) DC(E441):DG(F428) DC(E443):DG(F426) DA(E444):DT(F425) DT(E445):DA(F424) DG(E446):DC(F423) chainA ( 87) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 88) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 ( 90) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 92) ARG661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (206) THR775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (208) LYS777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (210) ASN779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 chainD ( 87) ASN656 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) VAL657 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ASN658 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) PRO659 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) THR775 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) ASN779 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnPaRkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtKsNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface/mrrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVNParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtksNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6kdb_D:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF HUMAN DNMT3B-DNMT3L IN COMPLEX WITH DNA CONTAINING CPGPT SITE organism=HOMO SAPIENS DNA sequence DC(E423):DG(F446) DA(E424):DT(F445) DT(E425):DA(F444) DG(E426):DC(F443) DG(E428):DC(F441) DT(E430):DA(F439) DC(E431):DG(F438) DT(E432):DA(F437) DA(E433):DT(F436) DA(E434):DT(F435) DT(E435):DA(F434) DT(E436):DA(F433) DA(E437):DT(F432) DG(E438):DC(F431) DA(E439):DT(F430) DC(E441):DG(F428) DC(E443):DG(F426) DA(E444):DT(F425) DT(E445):DA(F424) DG(E446):DC(F423) chainD ( 87) ASN656 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) VAL657 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ASN658 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) PRO659 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) THR775 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) ASN779 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVNParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtksNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6kdj_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y:DNA:LAMIVUDINE 5'- TRIPHOSPHATE TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 / HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(E-1) DG(E0) DC(E1):DG(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainA ( 24) TRP24 53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) MET151 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 chainB (245) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpMgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnqktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnWasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdj_B:DNA/RNA_polymerases; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y:DNA:LAMIVUDINE 5'- TRIPHOSPHATE TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(E-1) DG(E0) DC(E1):DG(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainB (245) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 prot.sequence ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnWasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdj_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y:DNA:LAMIVUDINE 5'- TRIPHOSPHATE TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 / HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DG(F0) DC(F1):DG(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17):DT(F18) chainC ( 24) TRP24 0 0 0 53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP76 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) MET151 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (501) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpMgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanretklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwpltEekikalveictemekegkiskigpenpyntpvfaikKkdstkwrklvdfReLnKrtqdfwevqlgiphpAglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkGspaifQssmtkilepfrkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrgTkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdk_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y:DNA:DCTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 / HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(E-1) DG(E0) DC(E1):DG(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainA ( 24) TRP24 53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP76 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) MET151 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 chainB (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpMgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnqktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdk_B:DNA/RNA_polymerases; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y:DNA:DCTP TERNARY COMPLEX organism=? DNA sequence DT(E-1) DG(E0) DC(E1):DG(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainB (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 prot.sequence ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdk_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y:DNA:DCTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 / HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DG(F0) DC(F1):DG(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 24) TRP24 0 0 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP76 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) MET151 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 (501) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpMgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanretklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwpltEekikalveictemekegkiskigpenpyntpvfaikKkdstkwrklvdfReLnKrtqdfwevqlgiphpAglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkGspaifQssmtkilepfrkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrgTkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdm_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y:DNA:ENTECAVIR 5'- TRIPHOSPHATE TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 / HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(E-1) DC(E0) DG(E1):DC(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainA ( 24) TRP24 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ILE63 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 chainB (245) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 (325) PHE346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvdfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnqktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnWasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepFknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdm_B:DNA/RNA_polymerases; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y:DNA:ENTECAVIR 5'- TRIPHOSPHATE TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(E-1) DC(E0) DG(E1):DC(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainB (245) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 (325) PHE346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnWasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepFknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdm_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y:DNA:ENTECAVIR 5'- TRIPHOSPHATE TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 / HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DC(F0) DG(F1):DC(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 24) TRP24 0 0 0 56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ILE63 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP76 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (501) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwpltEekikalveictemekegkiskigpenpyntpvfaikKkDstkwrklvdfReLnKrtqdfwevqlgiphpAglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfrkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrgTkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdn_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y:DNA:DGTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 / HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(E-1) DC(E0) DG(E1):DC(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainA ( 24) TRP24 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ILE63 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP76 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 chainB (245) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnqktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnWasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdn_B:DNA/RNA_polymerases; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y:DNA:DGTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(E-1) DC(E0) DG(E1):DC(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainB (245) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 prot.sequence ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnWasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdn_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y:DNA:DGTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 / HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DC(F0) DG(F1):DC(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 24) TRP24 0 0 0 56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ILE63 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP76 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (501) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwpltEekikalveictemekegkiskigpenpyntpvfaikKkDstkwrklvdfReLnKrtqdfwevqlgiphpAglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfrkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrgTkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdo_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y/M184V/F160M:DNA:LAMIVUDINE 5'-TRIPHOSPHATE TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 / HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(E-1) DG(E0) DC(E1):DG(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainA ( 23) TRP24 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PHE61 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LEU74 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG78 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ILE94 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) MET151 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) PRO157 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TYR183 0 0 0 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 chainB (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 (325) PHE346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence ispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpMgwkgsPaimqssmtkilepfrkqnpdiviyqYvddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnqktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepFknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdo_B:DNA/RNA_polymerases; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y/M184V/F160M:DNA:LAMIVUDINE 5'-TRIPHOSPHATE TERNARY COMPLEX organism=? DNA sequence DT(E-1) DG(E0) DC(E1):DG(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainB (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 (325) PHE346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepFknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdo_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE WITH Q151M/Y115F/F116Y/M184V/F160M:DNA:LAMIVUDINE 5'-TRIPHOSPHATE TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 / HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DG(F0) DC(F1):DG(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 23) TRP24 0 0 0 52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PHE61 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LEU74 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ASP76 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG78 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ILE94 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) MET151 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) PRO157 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TYR183 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (474) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (500) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 chainD prot.sequence ispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpMgwkgsPaimqssmtkilepfrkqnpdiviyqYvddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanretklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwplTeekikalveictemekegkiskigpenpyntpvfaiKkkdstkwrklvdFrElNkrtqdfwevqlgiphPaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwKgspaiFqssmtkilepfrkqnpdiviyqymdDlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrGtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >6kdv_A: title=CRYSTAL STRUCTURE OF TTCAS1-DNA COMPLEX organism=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) / Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) DNA sequence DT(G8):DA(H16) DG(G9):DC(H15) DC(G10):DG(H14) DT(G11):DA(H13) DG(G12):DC(H12) DG(G13):DC(H11) chainA ( 15) HIS27 0 0 0 0 0 39 ( 48) PRO60 0 0 0 0 0 2 ( 72) GLU84 0 0 0 0 0 11 prot.sequence lpkfrdglsylyveHavvereaggigiydqegltlapvaglgvlflgPgtrithaavrllaengctvawvgEgmarfyaqglgdtrsaarfyrqarawadpalhlevvmrlyrmrfpegltleqvrglegvrvrnayarwsretgvpwygrsydrgnwraadpvnralsagasylyglahaaivslgfspalgfihtgkllsfvydiadlykadylvpaafrtvaeseeaverrvrralreaiqegrllermaedllnlfrgl >6kdv_CD: title=CRYSTAL STRUCTURE OF TTCAS1-DNA COMPLEX organism=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) / Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) / Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) / Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) DNA sequence DC(F11):DG(E13) DC(F12):DG(E12) DA(F13):DT(E11) DG(F14):DC(E10) DC(F15):DG(E9) DA(F16):DT(E8) DT(F17):DA(E7) chainD chainC ( 15) HIS27 37 0 0 0 0 0 0 ( 48) PRO60 1 0 0 0 0 0 0 ( 72) GLU84 7 0 0 0 0 0 0 prot.sequence lpkfrdglsylyveHavvereaggigiydqegltlapvaglgvlflgPgtrithaavrllaengctvawvgEgmarfyaqglgdtrsaarfyrqarawadpalhlevvmrlyrmrplpegltleqvrglegvrvrnayarwsretgvpwygrsydrgnwraadpvnralsagasylyglahaaivslgfspalgfihtgkllsfvydiadlykadylvpaafrtvaeseeaverrvrralreaiqegrllermaedllnlfrgl/sylyvehavvereaGgigiydqegltlapvaglgvlflgpgtrithaAvrllaengctvawvgegmarfyaQglgdtrsaarfyrqarawadpalhlevvmrlyrmrfseplpegltleqvrglegvrvrnayarwsretgvpwygrsydrgnwraadpvnralsagasylyglahaaivslgfspalgfihtgkllsfvydiadlykadylvpaafrtvaeseeaverrvrralreaiqegrllermaedllnlfrglglptrpgglwdlegeveggva >6ke9_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE HUMAN TELOMERIC NUCLEOSOME DISPLAYS DISTINCT STRUCTURAL AND DYNAMIC PROPERTIES organism=HOMO SAPIENS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DT(I-69):DA(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DG(I-66):DC(J66) DG(I-65):DC(J65) DG(I-64):DC(J64) DT(I-63):DA(J63) DT(I-62):DA(J62) DA(I-61):DT(J61) DG(I-60):DC(J60) DG(I-59):DC(J59) DG(I-58):DC(J58) DT(I-57):DA(J57) DT(I-56):DA(J56) DA(I-55):DT(J55) DG(I-54):DC(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DT(I-51):DA(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DG(I-48):DC(J48) DG(I-47):DC(J47) DG(I-46):DC(J46) DT(I-45):DA(J45) DT(I-44):DA(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DT(I-38):DA(J38) DA(I-37):DT(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DT(I-33):DA(J33) DT(I-32):DA(J32) DA(I-31):DC(J30) DG(I-29):DC(J29) DG(I-28):DC(J28) DT(I-27):DA(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DG(I-23):DC(J23) DG(I-22):DC(J22) DT(I-21):DA(J21) DT(I-20):DA(J20) DA(I-19):DT(J19) DG(I-18):DC(J18) DG(I-17):DC(J17) DG(I-16):DC(J16) DT(I-15):DA(J15) DT(I-14):DA(J14) DA(I-13):DT(J13) DG(I-12):DC(J12) DG(I-11):DC(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DT(I-3):DA(J3) DT(I-2):DA(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DG(I1):DC(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DT(I4):DA(J-4) DA(I5):DT(J-5) DG(I6):DC(J-6) DG(I7):DC(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DT(I10):DA(J-10) DA(I11):DT(J-11) DG(I12):DC(J-12) DG(I13):DC(J-13) DG(I14):DC(J-14) DT(I16):DA(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DG(I19):DC(J-19) DG(I20):DC(J-20) DT(I21):DA(J-21) DT(I22):DA(J-22) DA(I23):DT(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DT(I27):DA(J-27) DT(I28):DA(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DG(I31):DC(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DT(I34):DA(J-34) DA(I35):DT(J-35) DG(I36):DC(J-36) DG(I37):DC(J-37) DG(I38):DC(J-38) DT(I39):DA(J-39) DT(I40):DA(J-40) DA(I41):DT(J-41) DG(I42):DC(J-42) DG(I43):DC(J-43) DG(I44):DC(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DG(I50):DC(J-50) DT(I51):DA(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DG(I54):DC(J-54) DG(I55):DC(J-55) DG(I56):DC(J-56) DT(I57):DA(J-57) DT(I58):DA(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DG(I66):DC(J-66) DG(I67):DC(J-67) DG(I68):DC(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) TYR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysVyvYkvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/Ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6ke9_G:Histone-fold; title=THE HUMAN TELOMERIC NUCLEOSOME DISPLAYS DISTINCT STRUCTURAL AND DYNAMIC PROPERTIES organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DT(I-69):DA(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DG(I-66):DC(J66) DG(I-65):DC(J65) DG(I-64):DC(J64) DT(I-63):DA(J63) DT(I-62):DA(J62) DA(I-61):DT(J61) DG(I-60):DC(J60) DG(I-59):DC(J59) DG(I-58):DC(J58) DT(I-57):DA(J57) DT(I-56):DA(J56) DA(I-55):DT(J55) DG(I-54):DC(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DT(I-51):DA(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DG(I-48):DC(J48) DG(I-47):DC(J47) DG(I-46):DC(J46) DT(I-45):DA(J45) DT(I-44):DA(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DT(I-38):DA(J38) DA(I-37):DT(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DT(I-33):DA(J33) DT(I-32):DA(J32) DA(I-31):DC(J30) DG(I-29):DC(J29) DG(I-28):DC(J28) DT(I-27):DA(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DG(I-23):DC(J23) DG(I-22):DC(J22) DT(I-21):DA(J21) DT(I-20):DA(J20) DA(I-19):DT(J19) DG(I-18):DC(J18) DG(I-17):DC(J17) DG(I-16):DC(J16) DT(I-15):DA(J15) DT(I-14):DA(J14) DA(I-13):DT(J13) DG(I-12):DC(J12) DG(I-11):DC(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DT(I-3):DA(J3) DT(I-2):DA(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DG(I1):DC(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DT(I4):DA(J-4) DA(I5):DT(J-5) DG(I6):DC(J-6) DG(I7):DC(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DT(I10):DA(J-10) DA(I11):DT(J-11) DG(I12):DC(J-12) DG(I13):DC(J-13) DG(I14):DC(J-14) DT(I16):DA(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DG(I19):DC(J-19) DG(I20):DC(J-20) DT(I21):DA(J-21) DT(I22):DA(J-22) DA(I23):DT(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DT(I27):DA(J-27) DT(I28):DA(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DG(I31):DC(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DT(I34):DA(J-34) DA(I35):DT(J-35) DG(I36):DC(J-36) DG(I37):DC(J-37) DG(I38):DC(J-38) DT(I39):DA(J-39) DT(I40):DA(J-40) DA(I41):DT(J-41) DG(I42):DC(J-42) DG(I43):DC(J-43) DG(I44):DC(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DG(I50):DC(J-50) DT(I51):DA(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DG(I54):DC(J-54) DG(I55):DC(J-55) DG(I56):DC(J-56) DT(I57):DA(J-57) DT(I58):DA(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DG(I66):DC(J-66) DG(I67):DC(J-67) DG(I68):DC(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >6kf9_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF THERMOCOCCUS KODAKARENSIS RNA POLYMERASE organism=THERMOCOCCUS KODAKARENSIS KOD1 DNA sequence DT(X13) DC(X14) DG(X15) DG(X16) DT(X17) DA(X18) DA(X19) DT(X20) DC(X21) DA(X22) DC(X23) DG(X24) DC(X25) DT(X26) chainA (831) THR835 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (832) ALA836 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence kkvigsiefgilspqeirkmsaaeitvpdtydddgypiegglmdkrlgvidpglrcetcgaragecpghfghielarpvihvgfaktihrvlestcrecgrikltdeeieeymqkfevmgdrkgavdklikeihkkakermvcphcgapqfpikferptiywelrkdeegneykhrmmpsevrdrlekipdkdlpllglhpeksrpewmvltvlpvppvtmrpsitlesgiraeddlthklvdiirinnrlksnieagapqliiedlwdllqyhvttyinnetsgvppakhksgrplktlaqrlkgkegrfrgnlsgkrvnfsartvispdpmisinevgvplavameltvpekvtefnyeklkqrvlngpekypganyvidpegrrirlmesnreliaekldigwtverhledgdvvlfnrqpslhrmsimahrvrvmpyrtfrlnlpvcppynadfdgdemnlhvpqteeaqaeakilmevqnhiispryggpliagiqdhisggylltregayftryeveqmlmfagmdvnelpepdkyengeplwsgktifslllpddltiwyrnklcdepercealeklieeklipdpeevrklaydgfvyiqngkllsgavdkkaygredgklldiivreygverarqfldqvtkltiwvithkgfttaiddedlpqeaidriheiireaeekvqrlieaykrgeleplpgktleetleskimavlaeardnagkvaerylgmnnhavimaktgargkilnitqmaamlgqqsirgkrlyrgyrgrvlthfkpgdlgarargfvtnsyksgltpqeyffhamggreglvdtavrTAqsgymqrrlinalqdlkvdydgtvrdptgiivqfkygedgvdpmkswqgktvdvdrvivrtllkmrgg >6kf9_BC: title=CRYO-EM STRUCTURE OF THERMOCOCCUS KODAKARENSIS RNA POLYMERASE organism=THERMOCOCCUS KODAKARENSIS KOD1 DNA sequence DG(Y2):DC(X21) DA(Y3):DT(X20) DT(Y4):DA(X19) DT(Y5):DA(X18) DA(Y6):DT(X17) DC(Y7):DG(X16) DC(Y8):DG(X15) DG(Y9):DC(X14) chainB (442) GLN450 6 0 0 0 0 0 0 0 chainC (322) ARG323 0 1 1 0 0 0 0 0 prot.sequence eptltpdelwlvmesywkekgfvrqhldsynafidhglqdvvnefgevvpdipnfkvkfgkirigqpefqeaqgqrrplypmdarirnltysaplylemipvvngieqepvevrigelpimlkskacrlyglsdeeliklgedpkdpggyfiingservivsiedlapnktlverderqnkvvakvfsyrhgyralitverkkdgilyvtipnvpkpvkfvyvmralglltdkeiveavsddpriqqvlfdnledasdistqeealdyigrlalpgqpkeyrlrraehiidnnllphmgvdpenrrakayylgmmalkvlelslglrgeddkdhyankrlklagdllkdlfrvafgqlvkdmqyqmtktyqrkgerytfeniqrfvrnsirpdvlseriehalatgswpggrtgvsqlldrtnymstlshlrrvtsplsrdQphfeardlhgthwgricptetpegpncglvknlalmsqittgiperevreylmkmgvvpieerrpapglyrvylngvligtvedgrklveriradrragkisdvinvalyedeevkevyinsddgrvrrplivvengkpkltrehvegikngtltwsdlirmgvieyldaeeeenayvatwpwevteehthlelmpaailgipaslvpypehnaaprntygagmakqslglgwanfrirvdtrghlmhypqvplvnsrimkavgfedrpagqnfvvavlsyhgynmedaviinkasierglarstffrtyeaeekrylggqkdnfevpspniqgylgekyyrhldedglifpeskvegkdvlvgrtspprfieeqsslgsmvlqgrretsvtvrpsekgvvdkvivtetgdgtklvkvtvrdlripelgdkfasrhgqkgviglivpqedmpwtesgivpdlivnphgipsrmtvgqlieaiggkvasltgrrvdgtafigepeeklrkeleelgfkhsgreimydgitgrrleadifigviyyqrlhhmvadkmharsrgpvqvltkqptegraregglrfgemerdvlighgaamllierlleesdktevwvcescghlaledkrrgkvycpvcgederiskvemsyafkllldelkamvirpslrlkdr/vaektiksmvskaelpdnikeelyaklieynekyklkkdeiqaiidetvreyqkaliepgeavgtvaaqsigepstqmtlntfhyagvaeinvtlglpriieivdarknpstpimtvyldeehrydrdkalevarriegttlenlareetidilnmeyvveidperlekagldmekvvrkltgsfksaefeaegytlvvrpkkvtklsdlrkiaekvkkhrlkglsgvgktiirkegdeyviytegsnfkqvlkvpgvdptrtrtnniweiaevlgieaarnaiideivstmreqglevdvrhimlvadmmtldgvirpigRhgivgekasvlaraafeittqhlfaaaergevdplngvvenvligqpvpvgtgivklamslplrpk >6khy_A:Xylose_isomerase-like; title=THE CRYSTAL STRUCTURE OF ASFVAP:AG organism=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) / African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) DNA sequence DC(E3):DG(F16) DT(E4):DA(F15) DC(E5):DG(F14) DG(E6):DC(F13) DT(E7):DA(F12) DC(E8):DG(F11) DG(E9):DC(F10) DG(E10):DC(F9) DG(E11):DA(F8) DG(E12):DC(F7) DA(E13):DT(F6) DC(E14):DG(F5) DG(E15):DC(F4) DC(E16):DG(F3) DT(E17):DA(F2) DG(E18):DC(F1) chainA ( 53) ARG50 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) TYR81 58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) LEU82 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gggmfgafvshrlwsdsgctttcitnsianyvafgeqigfpfksaqvfiagpRkaviniqeddkvellkmivkhnlwvvahgtYLdvpwsrrsafvthfiqqellickevgikglvlhlgavepeliveglkkikpvegvviyletphnkhhtykystmeqikelflrirntrlkqiglcidtahiwssgvnissyndagqwlrslenihsvippshimfhlndaatecgsgidrhaslfegmiwksyshkikqsglycfveyitrhqcpailernlgssmqlqtaltaefttlksllk >6khy_AB:Xylose_isomerase-like; title=THE CRYSTAL STRUCTURE OF ASFVAP:AG organism=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) / African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) / African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) / African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) DNA sequence DC(F1):DG(E18) DA(F2):DT(E17) DG(F3):DC(E16) DC(F4):DG(E15) DG(F5):DC(E14) DT(F6):DA(E13) DC(F7):DG(E12) DA(F8):DG(E11) DC(F9):DG(E10) DC(F10):DG(E9) DG(F11):DC(E8) DA(F12):DT(E7) DC(F13):DG(E6) DG(F14):DC(E5) DA(F15):DT(E4) DG(F16):DC(E3) chainA ( 53) ARG50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 ( 84) TYR81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58 ( 85) LEU82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainB prot.sequence gggmfgafvshrlwsdsgctttcitnsianyvafgeqigfpfksaqvfiagpRkaviniqeddkvellkmivkhnlwvvahgtYLdvpwsrrsafvthfiqqellickevgikglvlhlgavepeliveglkkikpvegvviyletphnkhhtykystmeqikelflrirntrlkqiglcidtahiwssgvnissyndagqwlrslenihsvippshimfhlndaatecgsgidrhaslfegmiwksyshkikqsglycfveyitrhqcpailernlgssmqlqtaltaefttlksllk/gggmfgafvshrlwsdsgctttcitnsianyvafgeqigfpfksaqvfiagpRkaviniqeddkvellkmivkhnlwvvahgtYLdvpwsrrsafvthfiqqellickevgikglvlhlgavepeliveglkkikpvegvviyletphnkhhtykystmeqikelflrirntrlkqiglcidtahiwssgvnissyndagqwlrslenihsvippshimfhlndaatecgsgidrhaslfegmiwksyshkikqsglycfveyitrhqcpailernlgssmqlqtaltaefttlksllk >6ki3_B:Xylose_isomerase-like; title=THE CRYSTAL STRUCTURE OF ASFVAP:DF COMMPLEX organism=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) / African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) DNA sequence DC(H2):DG(G17) DT(H3):DA(G16) DC(H4):DG(G15) DG(H5):DC(G14) DT(H6):DA(G13) DC(H7):DG(G12) DG(H8):DC(G11) chainB ( 53) PRO49 0 0 0 0 0 0 1 ( 54) ARG50 0 0 0 0 0 0 45 ( 55) LYS51 0 0 0 0 0 0 6 prot.sequence sgggmfgafvshrlwsdsgctttcitnsianyvafgeqigfpfksaqvfiagPRKaviniqeddkvellkmivkhnlwvvahgtyldvpwsrrsafvthfiqqellickevgikglvlhlgavepeliveglkkikpvegvviyletphnkhhtykystmeqikelflrirntrlkqiglcidtahiwssgvnissyndagqwlrslenihsvippshimfhlndaatecgsgidrhaslfegmiwksyshkikqsglycfveyitrhqcpailernlgssmqlqtaltaefttlksllk >6ki6_B:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF BCL11A IN COMPLEX WITH GAMMA-GLOBIN -115 HPFH REGION organism=Homo sapiens DNA sequence DC(E2):DG(F13) DC(E3):DG(F12) DT(E4):DA(F11) DT(E5):DA(F10) DG(E6):DC(F9) DA(E7):DT(F8) DC(E8):DG(F7) DC(E9):DG(F6) DA(E10):DT(F5) DA(E11):DT(F4) DT(E12):DA(F3) chainB ( 12) ASN753 0 9 4 2 0 0 0 0 0 0 0 ( 14) SER755 0 2 3 0 0 0 0 0 0 0 0 ( 15) ASN756 0 0 0 13 6 0 0 0 0 0 0 ( 18) VAL759 0 0 0 0 0 1 0 0 0 0 0 ( 40) GLN781 0 0 0 2 4 9 1 0 0 0 0 ( 41) SER782 0 0 0 1 0 0 0 0 0 0 0 ( 42) SER783 0 0 0 2 8 0 0 0 0 0 0 ( 43) LYS784 0 0 0 0 0 6 10 4 0 0 0 ( 46) ARG787 0 0 0 0 0 0 2 13 21 0 0 prot.sequence dtceycgkvfkNcSNltVhrrshtgerpykcelcnyacaQSSKltRhmkthg >6kiu_ABCDEFGH: title=CRYO-EM STRUCTURE OF HUMAN MLL1-UBNCP COMPLEX (3.2 ANGSTROM) organism=XENOPUS LAEVIS DNA sequence DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/lrDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/raKaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/rktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcyts/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/dnIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kaKtrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsak >6kiu_D:Histone-fold; title=CRYO-EM STRUCTURE OF HUMAN MLL1-UBNCP COMPLEX (3.2 ANGSTROM) organism=XENOPUS LAEVIS DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) chainD ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcyts >6kiv_ABCDEFGH: title=CRYO-EM STRUCTURE OF HUMAN MLL1-UBNCP COMPLEX (4.0 ANGSTROM) organism=XENOPUS LAEVIS DNA sequence DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC (112) SER122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainD ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krHrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/rakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkteS/rktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcyts/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kaKtrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsak >6kiv_D:Histone-fold; title=CRYO-EM STRUCTURE OF HUMAN MLL1-UBNCP COMPLEX (4.0 ANGSTROM) organism=XENOPUS LAEVIS DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) chainD ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcyts >6kiw_ABCDEFGH: title=CRYO-EM STRUCTURE OF HUMAN MLL3-UBNCP COMPLEX (4.0 ANGSTROM) organism=XENOPUS LAEVIS DNA sequence DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DG(I50):DT(J99) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/kvLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akAktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcyts/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akTrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/trKesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsak >6kiw_D:Histone-fold; title=CRYO-EM STRUCTURE OF HUMAN MLL3-UBNCP COMPLEX (4.0 ANGSTROM) organism=? DNA sequence DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DT(J99):DG(I50) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) chainD ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcyts >6kix_ABCDEFGH: title=CRYO-EM STRUCTURE OF HUMAN MLL1-NCP COMPLEX, BINDING MODE1 organism=XENOPUS LAEVIS DNA sequence DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J88):DA(I61) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DT(J118):DT(I31) DT(J119):DA(I30) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/lrDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/raKaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/rktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcyts/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kaktrssraglqfpvgrvhrlLrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsak >6kix_D:Histone-fold; title=CRYO-EM STRUCTURE OF HUMAN MLL1-NCP COMPLEX, BINDING MODE1 organism=XENOPUS LAEVIS DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I30):DT(J119) DT(I31):DT(J118) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I61):DT(J88) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) chainD ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcyts >6kj6_CDF: title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI CRL TRANSCRIPTION ACTIVATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI K-12 / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(G2):DA(H60) DG(G3):DC(H59) DC(G4):DG(H58) DA(G5):DT(H57) DC(G7):DG(H55) DC(G8):DG(H54) DG(G9):DC(H53) DT(G10):DA(H52) DG(G11):DC(H51) DC(G12):DG(H50) DG(G13):DG(H49) DT(G14):DT(H48) DC(G15):DC(H47) DG(G16):DG(H46) DA(G17):DA(H45) DG(G18):DG(H44) DG(G19):DG(H43) DG(G20):DG(H42) DT(G21):DT(H41) DA(G22):DA(H40) DA(G23):DA(H39) DT(G24):DT(H38) DA(G25):DA(H37) DA(G26):DT(H36) DG(G27):DC(H35) DC(G28):DG(H34) DA(G29):DT(H33) DT(G30):DA(H32) DA(G31):DT(H31) DC(G32):DG(H30) DG(G33):DC(H29) DT(G34):DA(H28) DG(G35):DC(H27) DA(G36):DT(H26) DG(G37):DC(H25) DG(G38):DC(H24) DT(G39):DA(H23) DC(G41):DG(H21) DG(G42):DC(H20) DA(G43):DT(H19) DT(G44):DA(H18) DG(G45):DC(H17) DT(G46):DA(H16) DC(G47):DG(H15) chainC (139) ARG151 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) TRP183 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ASP199 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG200 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (431) ILE445 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) ARG451 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (464) ARG478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) LYS496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (494) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (528) ARG542 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (533) VAL547 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (360) PRO427 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (713) THR790 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (714) ALA791 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 6) THR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) GLN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) LEU62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ILE65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LEU101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) PHE134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ASP135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) THR144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) TYR145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) THR147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) TRP148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) TRP149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) GLN152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ILE169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) HIS170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) LYS173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ASN216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ARG218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) LEU226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ILE237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) GLU300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 1 (252) GLN304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthskvlynariipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveravkeRlslgdldtlmpqdminaKpisaavkeffgSsqlsqfmdqnnplseithkrrisalgpggltreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqetkriklnkpewmiltvlpvlppdlrpfatsdlndlyrrvinrnnrlkrlapdiivrnekrmlqeavdalldnrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyeklvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsgerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativflegeqveysrvkianreletysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/rvldaTQlyLgeIgyspLltaeeevyfarralrgdvasrrrmiesnlRLvvkiarRygnrglalldlieegnlgliravekFDpeRgFRfSTYaTWWirQtieRaimnqtrtirlpIHivKelnvylrtaRelshkldhepsaeeiaeqldkpvddvsrmlrlNeRitsvdtpLggdsekalldIladekengpedttqdddmkqsivkwlfelnakqrevlarrfgllgyeaatledvgreigltrErvrQiqveglrrlreilqtqglniealfr >6kj6_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI CRL TRANSCRIPTION ACTIVATION COMPLEX organism=? DNA sequence DT(G2):DA(H60) DG(G3):DC(H59) DC(G4):DG(H58) DA(G5):DT(H57) DC(G7):DG(H55) DC(G8):DG(H54) DG(G9):DC(H53) DT(G10):DA(H52) DG(G11):DC(H51) DC(G12):DG(H50) DG(G13):DG(H49) DT(G14):DT(H48) DC(G15):DC(H47) DG(G16):DG(H46) DA(G17):DA(H45) DG(G18):DG(H44) DG(G19):DG(H43) DG(G20):DG(H42) DT(G21):DT(H41) DA(G22):DA(H40) DA(G23):DA(H39) DT(G24):DT(H38) DA(G25):DA(H37) DA(G26):DT(H36) DG(G27):DC(H35) DC(G28):DG(H34) DA(G29):DT(H33) DT(G30):DA(H32) DA(G31):DT(H31) DC(G32):DG(H30) DG(G33):DC(H29) DT(G34):DA(H28) DG(G35):DC(H27) DA(G36):DT(H26) DG(G37):DC(H25) DG(G38):DC(H24) DT(G39):DA(H23) DC(G41):DG(H21) DG(G42):DC(H20) DA(G43):DT(H19) DT(G44):DA(H18) DG(G45):DC(H17) DT(G46):DA(H16) DC(G47):DG(H15) chainF ( 6) THR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) GLN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) LEU62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ILE65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LEU101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) PHE134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ASP135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) PHE140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ARG141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) THR144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) TYR145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) THR147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) TRP148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) TRP149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) GLN152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ILE169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) HIS170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) LYS173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ASN216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ARG218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) LEU226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ILE237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) GLU300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 1 (252) GLN304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 prot.sequence rvldaTQlyLgeIgyspLltaeeevyfarralrgdvasrrrmiesnlRLvvkiarRygnrglalldlieegnlgliravekFDpeRgFRfSTYaTWWirQtieRaimnqtrtirlpIHivKelnvylrtaRelshkldhepsaeeiaeqldkpvddvsrmlrlNeRitsvdtpLggdsekalldIladekengpedttqdddmkqsivkwlfelnakqrevlarrfgllgyeaatledvgreigltrErvrQiqveglrrlreilqtqglniealfr >6kks_A:Homeodomain-like; title=STRUCTURAL INSIGHTS INTO TARGET DNA RECOGNITION BY R2R3-TYPE MYB TRANSCRIPTION FACTOR organism=Arabidopsis thaliana DNA sequence DA(B3):DT(C20) DT(B4):DA(C19) DT(B5):DA(C18) DC(B6):DG(C17) DT(B7):DA(C16) DC(B8):DG(C15) DC(B9):DG(C14) DA(B10):DT(C13) DA(B11):DT(C12) DC(B12):DG(C11) DC(B13):DG(C10) DG(B14):DC(C9) DC(B15):DG(C8) DA(B16):DT(C7) DT(B17):DA(C6) DT(B18):DA(C5) DT(B19):DA(C4) DT(B20):DA(C3) DC(B21):DG(C2) chainA ( 42) LYS55 0 0 0 0 0 0 0 0 0 0 2 8 7 0 0 0 0 0 0 ( 45) ARG58 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 46) LEU59 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 ( 93) ASN106 0 0 0 0 0 0 0 2 11 1 0 0 0 0 0 0 0 0 0 ( 96) LYS109 0 0 0 0 0 0 0 0 5 10 4 0 0 0 0 0 0 0 0 ( 97) ASN110 0 0 0 0 0 0 1 10 2 0 0 0 0 0 0 0 0 0 0 (100) ASN113 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (101) THR114 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence neykkglwtveedkilmdyvkahgkghwnriakktglkrcgKscRLrwmnylspnvkrgnfteqeedliirlhkllgnrwsliakrvpgrtdNqvKNywNThlskk >6knc_BD:DNA_clamp; title=POLD-PCNA-DNA (FORM B) organism=THERMOCOCCUS KODAKARENSIS / THERMOCOCCUS KODAKARENSIS KOD1 DNA sequence DC(F1):DG(G45) DG(F2):DC(G44) DA(F3):DT(G43) DA(F4):DT(G42) DC(F5):DG(G41) DT(F6):DA(G40) DG(F7):DC(G39) DC(F8):DG(G38) DC(F9):DG(G37) DT(F10):DA(G36) DG(F11):DC(G35) DG(F12):DC(G34) DA(F13):DT(G33) DA(F14):DT(G32) DT(F15):DA(G31) DC(F16):DG(G30) DC(F17):DG(G29) DT(F18):DA(G28) DG(F19):DC(G27) DA(F20):DT(G26) DC(F21):DG(G25) DG(F22):DC(G24) DA(F23):DT(G23) DC(F24):DG(G22) DA(F25):DT(G21) chainB (621) GLN692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (1032) ASN1135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 chainD prot.sequence pemkayfeslqreidrayaiarkaraqgkdpsfdvevpqatdmagrveslvgppgvaerirelvkeygkeiaalkvvdeiiegkfgdlgskekyaeqavrtalailtegivsaplegiadvkikrnewadgseylalyyagpirssggtaqalsvlvgdyvrrklgldrfkpsdehiermveevdlyhravtrlqyhpeadevrlamrnipieitgeetdkvevshrnvpgvetnhlrggailvlaegvlqkakklvkyidkmgiegwdwikefveakekgvekgfyyelyekfraniapnkkytkeiiggrplfaepstnggfrlrygrswsvnpatmlilgcivtpattvegpivrlkngsvvrvddyetalkvrnevdeilyvgdalvnfgdfvennqtllpanyveewwvqelvqaikdlyevelqpfaendreaveeaaeylevdpdflwnllkdplrvkpdvetaihlstvldipfhpyytlywntlqpeeveelqkallgaqiewaefrknrfakkvvlendknikrylellglphrlervekkrkvivveypwsaalltplgnlewefkakpfytvidiinennriklrdrgiswigkppvqvlfpiglaggQsrdikkaaeegktarveiaffkcpkcghvgpehlcpvcgtrkellwhcpkcgadypesdakdfnyrcpkcdvelkpyaereikpadllrqamdnvkvygidrlkgvkgmtsgykmaeplekgllrvkndvyvfkdgtirfdatdapithfkpkeigtsveklrelgythdfegkplerddqilelkvqdvilpyeagryllkvarfiddllekfyglprfynaekmedlvghlviglaphtsagiigriigfsdvlvgyahpyyhaakrrncdgdedavmllldallnfskyylpekrggkmdaplvvttrldprevdsevhnmdvvryyplefykatyelkspkevkviervedgdmeekvarqlalaeriravdehhvaetiinshlvpdlrgnlrsftrqefrcvkcNtkyrrppltgkcpkcggkivltvskgaiekylptakmlvtkyrvkdytrqricitekdiktlfqrtlmgfsadicekmvkertghs/mpfevvfdgakefadliatasnlideaafkfteegismramdpsrvvlidlnlpesifskyeveepetiginmdqfkkilkrgkakdtlilrkgdenfleitfegtakrtfrlplidveelelelpelpftakvvllgevlkegikdaslvsdaikfiakeneftmkaegetneveirltledeglldleveeetksaygirylsdmvkgigkadevilrfgnemplqmeymirdegrltfllaprvee >6kon_CDF: title=MYCOBACTERIUM TUBERCULOSIS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA H AND 5'-OH RNA OF 5 NT organism=MYCOBACTERIUM TUBERCULOSIS H37RV DNA sequence DT(G13):DA(H11) DC(G14):DG(H10) DA(G15):DT(H9) DC(G16):DG(H8) DG(G17):DC(H7) DG(G18):DC(H6) DA(G19):DT(H5) DT(G20):DA(H4) DG(G21):DC(H3) DC(G22):DG(H2) chainC (404) GLU460 30 0 0 0 0 0 0 0 0 0 (405) ARG461 2 0 0 0 0 0 0 0 0 0 chainD (284) GLN287 0 0 0 0 0 0 0 0 4 0 (288) ARG291 0 0 0 0 0 0 0 1 3 0 chainF prot.sequence ssnnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefvridrkrrqpvtvllfseimrstkdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielrleraaa/vnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaeraptlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/tdeeltarferdaiplldqlyggalrmtrnpadaedllqetmvkayagfrsfrhgtnlkawlyriltntyinsyrkkqrqpaeypteqitdwqlasnaehsstglrsaevealealpdteikealqalpeefrmavyyadvegfpykeiaeimdtpigtvmsrlhrgrrqlrglladvar >6koo_CDF: title=MYCOBACTERIUM TUBERCULOSIS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA H AND 5'-OH RNA OF 7 NT organism=MYCOBACTERIUM TUBERCULOSIS H37RV DNA sequence DT(H1):DA(G23) DG(H2):DC(G22) DC(H3):DG(G21) DA(H4):DT(G20) DT(H5):DA(G19) DC(H6):DG(G18) DC(H7):DG(G17) DG(H8):DC(G16) DT(H9):DA(G15) DG(H10):DC(G14) DA(H11):DT(G13) chainC (437) GLU460 0 0 0 0 0 0 0 0 0 0 6 (438) ARG461 0 0 0 0 0 0 0 0 0 0 7 chainD (286) GLN287 1 4 1 0 0 0 0 0 0 0 0 (290) ARG291 0 0 5 5 0 0 0 0 0 0 0 chainF prot.sequence ssnnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaernpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregededleraaanlgi/ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivveladgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmtgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/tdeeltarferdaiplldqlyggalrmtrnpadaedllqetmvkayagfrsfrhgtnlkawlyriltntyinsyrkkqrqpaeypteqitdwqlasnaehsstglrsaevealealpdteikealqalpeefrmavyyadvegfpykeiaeimdtpigtvmsrlhrgrrqlrglladvardr >6koo_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA H AND 5'-OH RNA OF 7 NT organism=MYCOBACTERIUM TUBERCULOSIS H37RV DNA sequence DT(H1):DA(G23) DG(H2):DC(G22) DC(H3):DG(G21) DA(H4):DT(G20) DT(H5):DA(G19) DC(H6):DG(G18) DC(H7):DG(G17) DG(H8):DC(G16) DT(H9):DA(G15) DG(H10):DC(G14) DA(H11):DT(G13) chainD (286) GLN287 1 4 1 0 0 0 0 0 0 0 0 (290) ARG291 0 0 5 5 0 0 0 0 0 0 0 prot.sequence ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivveladgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmtgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa >6kop_CD: title=MYCOBACTERIUM TUBERCULOSIS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA H AND 5'-OH RNA OF 9 NT organism=MYCOBACTERIUM TUBERCULOSIS H37RV DNA sequence DT(H1):DA(G23) DG(H2):DC(G22) DC(H3):DG(G21) DA(H4):DT(G20) DT(H5):DA(G19) DC(H6):DG(G18) DC(H7):DG(G17) DG(H8):DC(G16) DT(H9):DA(G15) DG(H10):DC(G14) DA(H11):DT(G13) chainC (440) GLU460 0 0 0 0 0 0 0 0 0 0 1 (441) ARG461 0 0 0 0 0 0 0 0 0 0 6 chainD (286) GLN287 0 6 4 0 0 0 0 0 0 0 0 (290) ARG291 0 0 4 2 0 0 0 0 0 0 0 prot.sequence ssnnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregededleraaanlgi/ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa >6kop_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=MYCOBACTERIUM TUBERCULOSIS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA H AND 5'-OH RNA OF 9 NT organism=? DNA sequence DT(G1) DT(G2) DG(G3) DT(G4) DG(G5) DG(G6) DG(G7) DA(G8) DG(G9) DC(G10) DT(G11) DG(G12) DT(G13) DC(G14) DA(G15) DC(G16) DG(G17) DG(G18) DA(G19) DT(G20) DG(G21) DC(G22) DA(G23) chainF ( 18) ASP38 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) GLN39 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LEU45 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) PRO51 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) LYS64 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) PHE72 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG73 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) THR76 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ASN77 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS79 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ALA80 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) TRP81 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) TYR83 0 0 0 0 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG84 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ILE85 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ASN88 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tdeeltarferdaipllDQlYggaLrmtrnPadaedllqetmvKayagfrsFRhgTNlKAWlYRIltNtyinsyrkkqrqpstglrsaevealealpdteikealqalpeefrmavyyadvegfpykeiaeimdtpigtvmsrlhrgrrqlrglladva >6koq_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA H AND 5'-OH RNA OF 10 NT organism=MYCOBACTERIUM TUBERCULOSIS H37RV DNA sequence DT(G13):DA(H11) DC(G14):DG(H10) DA(G15):DT(H9) DC(G16):DG(H8) DG(G17):DC(H7) DG(G18):DC(H6) DA(G19):DT(H5) DT(G20):DA(H4) DG(G21):DC(H3) DC(G22):DG(H2) DA(G23):DT(H1) chainC (440) GLU460 5 0 0 0 0 0 0 0 0 0 0 (441) ARG461 7 0 0 0 0 0 0 0 0 0 0 prot.sequence ssnnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregededleraaanlgi >6koq_CD: title=MYCOBACTERIUM TUBERCULOSIS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA H AND 5'-OH RNA OF 10 NT organism=MYCOBACTERIUM TUBERCULOSIS H37RV DNA sequence DT(G13):DA(H11) DC(G14):DG(H10) DA(G15):DT(H9) DC(G16):DG(H8) DG(G17):DC(H7) DG(G18):DC(H6) DA(G19):DT(H5) DT(G20):DA(H4) DG(G21):DC(H3) DC(G22):DG(H2) DA(G23):DT(H1) chainC (440) GLU460 5 0 0 0 0 0 0 0 0 0 0 (441) ARG461 7 0 0 0 0 0 0 0 0 0 0 chainD (286) GLN287 0 0 0 0 0 0 0 0 4 2 0 (290) ARG291 0 0 0 0 0 0 0 1 0 0 0 prot.sequence ssnnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregededleraaanlgi/ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivveladgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa >6kqd_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-OH RNA OF 3 NT organism=? DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (414) GLU421 0 0 0 0 0 0 0 0 0 11 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrEragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask >6kqd_CDF: title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-OH RNA OF 3 NT organism=? DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) chainC (414) GLU421 11 0 0 0 0 0 0 0 0 0 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrEragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvApgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6kqd_MNP: title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-OH RNA OF 3 NT organism=? DNA sequence DG(Q4):DC(R24) DC(Q5):DG(R23) DA(Q6):DT(R22) DT(Q7):DA(R21) DC(Q8):DG(R20) DC(Q9):DG(R19) DG(Q10):DC(R18) DT(Q11):DA(R17) DG(Q12):DC(R16) DA(Q13):DT(R15) chainM (414) GLU421 0 0 0 0 0 0 0 0 0 13 chainN chainP prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrEragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvApgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/tsdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6kqe_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-OH RNA OF 4 NT organism=? DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (415) GLU421 0 0 0 0 0 0 0 0 0 8 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrEragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask >6kqe_CDF: title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-OH RNA OF 4 NT organism=? DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (415) GLU421 0 0 0 0 0 0 0 0 0 8 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrEragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvaPgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6kqf_CDF: title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-OH RNA OF 5 NT organism=? DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (415) GLU421 0 0 0 0 0 0 0 0 0 4 (416) ARG422 0 0 0 0 0 0 0 0 0 41 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvaPGdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6kqg_CDF: title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-OH RNA OF 6 NT organism=? DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (415) GLU421 0 0 0 0 0 0 0 0 0 7 (416) ARG422 0 0 0 0 0 0 0 0 0 8 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvaPGdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6kqh_CDF: title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-OH RNA OF 7 NT organism=? DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (415) GLU421 0 0 0 0 0 0 0 0 0 7 (416) ARG422 0 0 0 0 0 0 0 0 0 31 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvaPGdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6kql_CDF: title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-TRIPHOSPHATE RNA OF 4 NT organism=? DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) DG(G14):DG(H14) DT(G15):DT(H13) DC(G16):DC(H12) DG(G17):DG(H11) DA(G18):DA(H10) DG(G19):DG(H9) DG(G20):DG(H8) chainC (136) ARG142 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 (161) LYS167 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 (164) PRO170 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (165) TRP171 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 (181) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (182) LYS188 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (237) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 (240) ASP246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (250) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (260) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 (319) ILE325 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (320) ASP326 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (325) ARG331 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (412) LEU418 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 (415) GLU421 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 (420) ASP426 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (421) VAL427 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (441) ALA447 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainD (626) ARG628 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (703) ALA705 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (704) PRO706 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainF ( 2) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 ( 4) VAL81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 ( 5) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 ( 8) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (244) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (247) GLU324 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (255) PHE332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpKrgPWidlevepngvvsmkvNKrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgDppkrdkavaYvygliadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtrEragfDVrdvhrthygricpvetpegAniglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpVRqyLheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdEkdsfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6kql_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-TRIPHOSPHATE RNA OF 4 NT organism=? DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) DG(G14):DG(H14) DT(G15):DT(H13) DC(G16):DC(H12) DG(G17):DG(H11) DA(G18):DA(H10) DG(G19):DG(H9) DG(G20):DG(H8) chainF ( 2) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 ( 4) VAL81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 ( 5) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 ( 8) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (244) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (247) GLU324 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (255) PHE332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence sDpVRqyLheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdEkdsfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6kqm_CDF: title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-TRIPHOSPHATE RNA OF 5 NT organism=? DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) DG(G14):DG(H14) DT(G15):DT(H13) DC(G16):DC(H12) DG(G17):DG(H11) DA(G18):DA(H10) DG(G19):DG(H9) DG(G20):DG(H8) chainC (136) ARG142 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 (161) LYS167 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (181) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (237) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 (240) ASP246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (250) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (260) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 (319) ILE325 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (320) ASP326 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (325) ARG331 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (412) LEU418 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 (415) GLU421 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 0 0 0 7 0 5 0 0 0 0 0 (420) ASP426 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (421) VAL427 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 (441) ALA447 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainD (626) ARG628 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (703) ALA705 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (704) PRO706 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainF ( 2) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 ( 4) VAL81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 ( 5) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 ( 8) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (244) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (255) PHE332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpKrgpwidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgDppkrdkavaYvygliadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtrERagfDVrdvhrthygricpvetpegAniglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpVRqyLheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdekdsfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6kqm_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-TRIPHOSPHATE RNA OF 5 NT organism=? DNA sequence DG(H8):DG(G20) DG(H9):DG(G19) DA(H10):DA(G18) DG(H11):DG(G17) DC(H12):DC(G16) DT(H13):DT(G15) DG(H14):DG(G14) DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) chainD (626) ARG628 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (703) ALA705 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea >6kqn_CDF: title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-TRIPHOSPHATE RNA OF 6 NT organism=? DNA sequence DG(H7):DG(G21) DG(H8):DG(G20) DG(H9):DG(G19) DA(H10):DA(G18) DG(H11):DG(G17) DC(H12):DC(G16) DT(H13):DT(G15) DG(H14):DG(G14) DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) chainC (136) ARG142 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 (161) LYS167 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (237) ARG243 0 0 7 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ASP246 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) PRO247 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) TYR256 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ARG266 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ILE325 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (320) ASP326 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (325) ARG331 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 (412) LEU418 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 (415) GLU421 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 5 0 5 0 0 0 0 0 0 0 0 0 (420) ASP426 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (421) VAL427 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (441) ALA447 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainD (703) ALA705 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainF ( 2) ASP79 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) VAL81 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG82 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) LEU85 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) HIS86 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG193 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) PHE332 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpKrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgDPpkrdkavaYvygliadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtrERagfDVrdvhrthygricpvetpegAniglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpVRqyLHeigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlRlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6kqn_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-TRIPHOSPHATE RNA OF 6 NT organism=? DNA sequence DG(H7):DG(G21) DG(H8):DG(G20) DG(H9):DG(G19) DA(H10):DA(G18) DG(H11):DG(G17) DC(H12):DC(G16) DT(H13):DT(G15) DG(H14):DG(G14) DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) chainD (703) ALA705 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea >6ksf_A:Clavaminate_synthase-like; title=CRYSTAL STRUCTURE OF ALKBH1 BOUND TO 21-MER DNA BULGE organism=Mus musculus DNA sequence DG(C1):DC(B24) DG(C2):DC(B23) DA(C3):DT(B22) DT(C4):DA(B21) DC(C5):DG(B20) DC(C6):DG(B19) DA(C7):DT(B18) DG(C8):DC(B17) DC(C9):DG(B16) DA(C10):DT(B15) DC(C11):DG(B14) DG(C12):DC(B13) DC(C13):DG(B12) DC(C14):DG(B8) DA(C15):DT(B7) DC(C16):DG(B6) DT(C17):DA(B5) DC(C18):DG(B4) DA(C19):DT(B3) DG(C20):DC(B2) DC(C21):DG(B1) chainA (140) ARG159 0 0 0 0 7 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence edafrklfrfyrqsrpgtadlgavidfseahlarspkpgvpqvvrfplnvssvterdaervglepvskwrayglegypgfifipnpflpgcqrhwvkqclklysqkpnvsnldkhmtkeetqglweqskevlrskevtkRrprsllerlrwvtlgyhynwdskkysadhytpfpsdlaflseqvatacgfqgfqaeagilnyyrldstlgihvdrceldhskpllsfsfgqsaifllgglkrdeaptamfmhsgdimvmsgfsrllnhavprvlphpdgeslphsletplpavlpsnslvepssvedwqvcatylrtarvnmtvrqvlatgqdfp >6kvd_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CONTAINING H2A.J organism=HOMO SAPIENS DNA sequence DA(I1):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 15) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/RakaksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kkphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/hrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/srkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >6kvd_D:Histone-fold; title=CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CONTAINING H2A.J organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DA(I1) chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6kvo_A: title=CRYSTAL STRUCTURE OF CHLOROPLAST RESOLVASE IN COMPLEX WITH HOLLIDAY JUNCTION organism=NICOTIANA TABACUM DNA sequence DA(F10):DT(C9) DT(F11):DA(C8) DC(F12):DG(C7) DT(F13):DA(C6) DG(F14):DC(C5) DT(F15):DA(C4) DT(F16):DA(C3) DG(F17):DC(C2) DT(F18):DA(C1) chainA ( 75) GLN182 3 0 0 0 0 0 0 0 0 ( 76) ASP183 27 0 0 0 0 0 0 0 0 prot.sequence hmnagwvigvdpdtsgalallkpnqppqvfdsphlkvlvgvrkrldakaivqllksfeapigttvyveqstpypQDgkqgwwsggfgygmwigilvasgfsvipvpssawksefqltkersnkdysrqvasqlfpslssllkrkkdhgraealliaaygkgikin >6kw3_S:Histone-fold; title=THE CLASSA RSC-NUCLEOSOME COMPLEX organism=? DNA sequence DT(V1):DA(U147) DC(V2):DG(U146) DG(V4):DC(U144) DG(V5):DC(U143) DA(V6):DT(U142) DT(V7):DA(U141) DG(V8):DC(U140) DT(V9):DA(U139) DT(V11):DA(U137) DA(V12):DT(U136) DT(V13):DA(U135) DA(V14):DT(U134) DT(V15):DA(U133) DT(V17):DA(U131) DG(V18):DC(U130) DA(V19):DT(U129) DC(V20):DG(U128) DA(V21):DT(U127) DC(V22):DG(U126) DG(V23):DC(U125) DT(V24):DA(U124) DG(V25):DC(U123) DC(V26):DG(U122) DC(V27):DG(U121) DT(V28):DA(U120) DG(V29):DC(U119) DG(V30):DC(U118) DA(V31):DT(U117) DG(V32):DC(U116) DA(V33):DT(U115) DC(V34):DG(U114) DT(V35):DA(U113) DA(V36):DT(U112) DG(V37):DC(U111) DG(V38):DC(U110) DG(V39):DC(U109) DA(V40):DT(U108) DG(V41):DC(U107) DT(V42):DA(U106) DA(V43):DT(U105) DA(V44):DT(U104) DT(V45):DA(U103) DC(V46):DG(U102) DC(V47):DG(U101) DC(V48):DG(U100) DC(V49):DG(U99) DT(V50):DA(U98) DT(V51):DA(U97) DG(V52):DC(U96) DG(V53):DC(U95) DC(V54):DG(U94) DG(V55):DC(U93) DG(V56):DC(U92) DT(V58):DA(U91) DA(V59):DT(U89) DA(V60):DT(U88) DA(V61):DT(U87) DA(V62):DG(U85) DG(V64):DC(U84) DC(V65):DG(U83) DG(V66):DC(U82) DG(V67):DC(U81) DG(V68):DC(U80) DG(V69):DC(U79) DG(V70):DC(U78) DA(V71):DT(U77) DC(V72):DG(U76) DA(V73):DT(U75) DG(V74):DC(U74) DC(V75):DG(U73) DG(V76):DC(U72) DC(V77):DG(U71) DG(V78):DC(U70) DT(V79):DA(U69) DA(V80):DT(U68) DC(V81):DG(U67) DG(V82):DC(U66) DT(V83):DA(U65) DG(V84):DC(U64) DC(V85):DG(U63) DG(V86):DC(U62) DT(V88):DA(U61) DT(V89):DA(U59) DA(V90):DT(U58) DA(V91):DT(U57) DG(V92):DC(U56) DC(V93):DG(U55) DG(V95):DC(U54) DT(V96):DA(U52) DG(V97):DC(U51) DC(V98):DG(U50) DT(V99):DA(U49) DA(V100):DT(U48) DG(V101):DC(U47) DA(V102):DT(U46) DG(V103):DC(U45) DC(V104):DG(U44) DT(V105):DA(U43) DG(V106):DC(U42) DT(V107):DA(U41) DC(V108):DG(U40) DT(V109):DA(U39) DA(V110):DT(U38) DC(V111):DG(U37) DG(V112):DC(U36) DA(V113):DT(U35) DC(V114):DG(U34) DC(V115):DG(U33) DA(V116):DT(U32) DA(V117):DT(U31) DT(V118):DA(U30) DT(V119):DA(U29) DG(V120):DC(U28) DA(V121):DT(U27) DG(V122):DC(U26) DC(V123):DG(U25) DG(V124):DC(U24) DG(V125):DC(U23) DC(V126):DG(U22) DC(V127):DG(U21) DT(V128):DA(U20) DC(V129):DG(U19) DG(V130):DC(U18) DG(V131):DC(U17) DC(V132):DG(U16) DA(V133):DT(U15) DC(V134):DG(U14) DC(V135):DG(U13) DG(V136):DC(U12) DG(V137):DC(U11) DG(V138):DC(U10) DA(V139):DT(U9) DT(V140):DA(U8) DT(V141):DA(U7) DC(V142):DG(U6) DT(V143):DA(U5) DC(V144):DG(U4) DA(V145):DT(U3) DT(V146):DA(U2) chainS ( 1) ALA12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence AkaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >6kw4_Y:P-loop_containing_nucleoside_triphosphate_hydrolases; title=THE CLASSB RSC-NUCLEOSOME COMPLEX organism=? DNA sequence DT(W11):DA(U157) DC(W12):DG(U156) DG(W13):DC(U155) DA(W14):DT(U154) DC(W15):DG(U153) DA(W16):DT(U152) DA(W17):DT(U151) DG(W18):DC(U150) DC(W19):DG(U149) DT(W20):DA(U148) DT(W21):DA(U147) DC(W22):DG(U146) DA(W23):DT(U145) DG(W24):DC(U144) DG(W25):DC(U143) DA(W26):DT(U142) DT(W27):DA(U141) DG(W28):DC(U140) DT(W29):DA(U139) DA(W30):DT(U138) DT(W31):DA(U137) DA(W32):DT(U136) DT(W33):DA(U135) DA(W34):DT(U134) DT(W35):DA(U133) DC(W36):DG(U132) DT(W37):DA(U131) DG(W38):DC(U130) DA(W39):DT(U129) DC(W40):DG(U128) DA(W41):DT(U127) DC(W42):DG(U126) DG(W43):DC(U125) DT(W44):DA(U124) DG(W45):DC(U123) DC(W46):DG(U122) DC(W47):DG(U121) DT(W48):DA(U120) DG(W49):DC(U119) DG(W50):DC(U118) DA(W51):DT(U117) DG(W52):DC(U116) DA(W53):DT(U115) DC(W54):DG(U114) DT(W55):DA(U113) DA(W56):DT(U112) DG(W57):DC(U111) DG(W58):DC(U110) DG(W59):DC(U109) DA(W60):DT(U108) DG(W61):DC(U107) DT(W62):DA(U106) DA(W63):DT(U105) DA(W64):DT(U104) DT(W65):DA(U103) DC(W66):DG(U102) DC(W67):DG(U101) DC(W68):DG(U100) DC(W69):DG(U99) DT(W70):DA(U98) DT(W71):DA(U97) DG(W72):DC(U96) DG(W73):DC(U95) DC(W74):DG(U94) DG(W75):DC(U93) DG(W76):DC(U92) DT(W77):DA(U91) DT(W78):DA(U90) DA(W79):DT(U89) DA(W80):DT(U88) DA(W81):DT(U87) DA(W82):DT(U86) DC(W83):DG(U85) DG(W84):DC(U84) DC(W85):DG(U83) DG(W86):DC(U82) DG(W87):DC(U81) DG(W88):DC(U80) DG(W89):DC(U79) DG(W90):DC(U78) DA(W91):DT(U77) DC(W92):DG(U76) DA(W93):DT(U75) DG(W94):DC(U74) DC(W95):DG(U73) DG(W96):DC(U72) DC(W97):DG(U71) DG(W98):DC(U70) DT(W99):DA(U69) DA(W100):DT(U68) DC(W101):DG(U67) DG(W102):DC(U66) DT(W103):DA(U65) DG(W104):DC(U64) DC(W105):DG(U63) DG(W106):DC(U62) DT(W107):DA(U61) DT(W108):DA(U60) DT(W109):DA(U59) DA(W110):DT(U58) DA(W111):DT(U57) DG(W112):DC(U56) DC(W113):DG(U55) DG(W114):DC(U54) DG(W115):DC(U53) DT(W116):DA(U52) DG(W117):DC(U51) DC(W118):DG(U50) DT(W119):DA(U49) DA(W120):DT(U48) DG(W121):DC(U47) DA(W122):DT(U46) DG(W123):DC(U45) DC(W124):DG(U44) DT(W125):DA(U43) DG(W126):DC(U42) DT(W127):DA(U41) DC(W128):DG(U40) DT(W129):DA(U39) DA(W130):DT(U38) DC(W131):DG(U37) DG(W132):DC(U36) DA(W133):DT(U35) DC(W134):DG(U34) DC(W135):DG(U33) DA(W136):DT(U32) DA(W137):DT(U31) DT(W138):DA(U30) DT(W139):DA(U29) DG(W140):DC(U28) DA(W141):DT(U27) DG(W142):DC(U26) DC(W143):DG(U25) DG(W144):DC(U24) DG(W145):DC(U23) DC(W146):DG(U22) DC(W147):DG(U21) DT(W148):DA(U20) DC(W149):DG(U19) DG(W150):DC(U18) DG(W151):DC(U17) DC(W152):DG(U16) DA(W153):DT(U15) DC(W154):DG(U14) DC(W155):DG(U13) DG(W156):DC(U12) DG(W157):DC(U11) DG(W158):DC(U10) DA(W159):DT(U9) DT(W160):DA(U8) DT(W161):DA(U7) DC(W162):DG(U6) DT(W163):DA(U5) DC(W164):DG(U4) DA(W165):DT(U3) DT(W166):DA(U2) chainY (150) GLU577 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) SER840 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (419) ARG868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lldqtkdtritqllrqtnsflyyevahrikekidkqpsilvggtlkeyqlrglewmvslynnhlngilademglgktiqsislitylyevkkdpflvivplstitnwtlefekwapslntiiykgtpnqrhslqhqirvgnfdvllttyEyiikdksllskhdwahmiideghrmknaqsklsftishyyrtrnrliltgtplqnnlpelwallnfvlpkifnsaktfedwfntpfklelteeetlliirrlhkvlrpfllrrlkkevekdlpdkvekvikcklsglqqqlyqqmlkhnalglnnkimqlrkicnhpfvfdevegvvnpsrgnsdllfrvagkfelldrvlpkfkasghrvlmffqmtqvmdimedflrmkdlkymrldgStkteertemlnafnapdsdyfcfllstRagglglnlqtadtviifdtdwnphqdlqaqdrahrigqknevrilrlittdsveevileramqkldidgkviqagkfdnkstaeeqeaflrrlieseeldddelndtlarsadekilfdkidkermnqe >6kxv_A:Histone-fold; title=CRYSTAL STRUCTURE OF A NUCLEOSOME CONTAINING LEISHMANIA HISTONE H3 organism=LEISHMANIA MAJOR DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainA ( 1) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Rwrpgtcaireirkfqkstslliqcapfqrlvrevssaqkeglrfqssaimalqeateayivslmadtnlacihakrvtiqpkdiqlalrlrge >6kxv_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF A NUCLEOSOME CONTAINING LEISHMANIA HISTONE H3 organism=HOMO SAPIENS / LEISHMANIA MAJOR DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DT(I70):DA(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DA(I77):DT(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 1) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 1) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence Rwrpgtcaireirkfqkstslliqcapfqrlvrevssaqkeglrfqssaimalqeateayivslmadtnlacihakrvtiqpkdiqlalrlrge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/rakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysiyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/Rwrpgtcaireirkfqkstslliqcapfqrlvrevssaqkeglrfqssaimalqeateayivslmadtnlacihakrvtiqpkdiqlalrlrger/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kesysiyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6l2n_A:Transglycosidases; title=CRYSTAL STRUCTURE OF THE R.PABI(Y68F-K154A)-DSDNA(GTAC-3BP-GTAC) COMPLEX organism=Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) DNA sequence DT(C-11) DC(C-10) DA(C-9) DG(C-8) DC(C-7) DA(C-6) DG(C-5) DT(C-4) DA(C-3) DC(C-2) DT(C-1) DA(C0) DA(C1) DG(C2) DT(C3) DA(C4) DC(C5) DT(C6) DG(C7) DC(C8) DT(C9) DG(C10) DA(C11) chainA ( 22) THR28 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence measvsfengkivvrlpitrpTskirvkkiengvgipvstrkksfpsdenlrdyyiewqisfardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlkhaqravgyqsmvyvcipltnvepslagrvarrnevvkyevpvdlmkellkafiiasethkndivkflrsii >6l2n_AB:Transglycosidases; title=CRYSTAL STRUCTURE OF THE R.PABI(Y68F-K154A)-DSDNA(GTAC-3BP-GTAC) COMPLEX organism=Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) DNA sequence DT(C-11) DC(C-10) DA(C-9) DG(C-8) DC(C-7) DA(C-6) DG(C-5) DT(C-4) DA(C-3) DC(C-2) DT(C-1) DA(C0) DA(C1) DG(C2) DT(C3) DA(C4) DC(C5) DT(C6) DG(C7) DC(C8) DT(C9) DG(C10) DA(C11) chainA ( 22) THR28 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 16) THR28 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) LYS48 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence measvsfengkivvrlpitrpTskirvkkiengvgipvstrkksfpsdenlrdyyiewqisfardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlkhaqravgyqsmvyvcipltnvepslagrvarrnevvkyevpvdlmkellkafiiasethkndivkflrsii/easvsivvrlpitrpTskirvkkiengvgipvstrKksfpsdenlrdyyiewqisfardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlkhaqravgyqsmvyvcipltnvepslagrvarrnevvkyevpvdlmkellkafiiasethkndivkflrsii >6l2o_A:Transglycosidases; title=CRYSTAL STRUCTURE OF THE R.PABI(Y68F-K154A)-DSDNA(GTAC-5BP-GTAC) COMPLEX organism=Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) DNA sequence DG(C-9) DC(C-8) DA(C-7) DG(C-6) DT(C-5) DA(C-4) DC(C-3) DT(C-2) DT(C-1) DA(C0) DA(C1) DA(C2) DG(C3) DT(C4) DA(C5) DC(C6) DT(C7) DG(C8) DC(C9) DT(C10) chainA ( 22) THR28 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence measvsfengkivvrlpitrpTskirvkkiengvgipvstrkksfpsdenlrdyyiewqisfardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlkhaqravgyqsmvyvcipltnvepslagrvarrnevvkyevpvdlmkellkafiiasethkndivkflrsii >6l2o_AB:Transglycosidases; title=CRYSTAL STRUCTURE OF THE R.PABI(Y68F-K154A)-DSDNA(GTAC-5BP-GTAC) COMPLEX organism=Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) DNA sequence DG(C-9) DC(C-8) DA(C-7) DG(C-6) DT(C-5) DA(C-4) DC(C-3) DT(C-2) DT(C-1) DA(C0) DA(C1) DA(C2) DG(C3) DT(C4) DA(C5) DC(C6) DT(C7) DG(C8) DC(C9) DT(C10) chainA ( 22) THR28 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 17) THR28 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence measvsfengkivvrlpitrpTskirvkkiengvgipvstrkksfpsdenlrdyyiewqisfardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlkhaqravgyqsmvyvcipltnvepslagrvarrnevvkyevpvdlmkellkafiiasethkndivkflrsii/measvkivvrlpitrpTskirvkkiengvgipvstrkksfpsdenlrdyyiewqisfardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlkhaqravgyqsmvyvcipltnvepslagrvarrnevvkyevpvdlmkellkafiiasethkndivkflrsii >6l3g_AB:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURAL BASIS FOR DNA UNWINDING AT FORKED DSDNA BY TWO COORDINATING PIF1 HELICASES organism=Bacteroides sp. AF32-8BH DNA sequence DT(D4) DT(D5) DT(D6) DT(D7) DT(D8) DT(D9) DT(D10) DC(D11) DG(D12) DC(D13) DG(D14) DC(D15) DG(D16) DC(D17) DG(D18) DC(D19) DG(D20) DT(D21) DT(D22) DT(D23) DT(D24) chainA ( 65) HIS68 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) PRO74 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) PHE75 0 0 0 28 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) TYR91 0 0 0 0 0 0 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) ARG111 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) VAL149 0 10 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) LYS151 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLU154 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) HIS236 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) SER290 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) HIS361 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) HIS377 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (360) PHE379 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) CYS380 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 66) HIS68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 72) PRO74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 ( 73) PHE75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 7 0 (147) VAL149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 12 0 0 0 (149) LYS151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 (229) HIS236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (358) HIS377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (360) PHE379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 1 0 0 0 0 (361) CYS380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence milteemqkimnliqddennvfvtgkagsgkttflkylieksgkncivaaptgiaainaggvtlHslfgiPFgpitpydrlenkfseYkvelllkmelliideismvRpdildtidrklrwvyesdepfggvqvvmfgdlfqlppVtKkqEreilsdfydgffffnalvfkrtgfhiveltkifrqtepefinvlnnirnyqvtsdeldllselkdrkineyihictHkadvekinadklgeqeirnydivikdkfpessipcdlhlklrvgarvmslvndSlkgyyngmlgivtalednvitvrmdngrtikferytwsnteeigsctqfpltlawaitiHksqgltfdkiiihvsHtFCpgqlyvalsrcrtlegivsdafitkqmiipeyalidferayksegnyygkrl/dmilteemqkimnliqddennvfvtgkagsgkttflkylieksgkncivaaptgiaainaggvtlHslfgiPFgpitpydrlenkfseykvelllkmelliideismvrpdildtidrklrwvyesdepfggvqvvmfgdlfqlppVtKkqereilsdfydgffffnalvfkrtgfhiveltkifrqtepefinvlnnirnyqvtsdeldllselkdrkineyihictHkadvekinadklgeqeirnydivikdkfpessipcdlhlklrvgarvmslvndslkgyyngmlgivtalednvitvrmdngrtikferytwsnteigsctqfpltlawaitihksqgltfdkiiihvsHtFCpgqlyvalsrcrtlegivsdafitkqmiipeyalidferayksegnyygkrl >6l3g_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURAL BASIS FOR DNA UNWINDING AT FORKED DSDNA BY TWO COORDINATING PIF1 HELICASES organism=Bacteroides sp. AF32-8BH DNA sequence DT(D4) DT(D5) DT(D6) DT(D7) DT(D8) DT(D9) DT(D10) DC(D11) DG(D12) DC(D13) DG(D14) DC(D15) DG(D16) DC(D17) DG(D18) DC(D19) DG(D20) DT(D21) DT(D22) DT(D23) DT(D24) chainB ( 66) HIS68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 72) PRO74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 ( 73) PHE75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 7 0 (147) VAL149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 12 0 0 0 (149) LYS151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 (229) HIS236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (358) HIS377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (360) PHE379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 1 0 0 0 0 (361) CYS380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence dmilteemqkimnliqddennvfvtgkagsgkttflkylieksgkncivaaptgiaainaggvtlHslfgiPFgpitpydrlenkfseykvelllkmelliideismvrpdildtidrklrwvyesdepfggvqvvmfgdlfqlppVtKkqereilsdfydgffffnalvfkrtgfhiveltkifrqtepefinvlnnirnyqvtsdeldllselkdrkineyihictHkadvekinadklgeqeirnydivikdkfpessipcdlhlklrvgarvmslvndslkgyyngmlgivtalednvitvrmdngrtikferytwsnteigsctqfpltlawaitihksqgltfdkiiihvsHtFCpgqlyvalsrcrtlegivsdafitkqmiipeyalidferayksegnyygkrl >6l49_D:Histone-fold; title=H3-CA-H3 TRI-NUCLEOSOME WITH THE 22 BASE-PAIR LINKER DNA organism=HOMO SAPIENS DNA sequence DA(I-242):DT(J242) DT(I-241):DA(J241) DC(I-240):DG(J240) DA(I-239):DT(J239) DG(I-238):DC(J238) DA(I-237):DT(J237) DA(I-236):DT(J236) DT(I-235):DA(J235) DC(I-234):DG(J234) DC(I-233):DG(J233) DC(I-232):DG(J232) DG(I-231):DC(J231) DG(I-230):DC(J230) DT(I-229):DA(J229) DG(I-228):DC(J228) DC(I-227):DG(J227) DC(I-226):DG(J226) DG(I-225):DC(J225) DA(I-224):DT(J224) DG(I-223):DC(J223) DG(I-222):DC(J222) DC(I-221):DG(J221) DC(I-220):DG(J220) DG(I-219):DC(J219) DC(I-218):DG(J218) DT(I-217):DA(J217) DC(I-216):DG(J216) DA(I-215):DT(J215) DA(I-214):DT(J214) DT(I-213):DA(J213) DT(I-212):DA(J212) DG(I-211):DC(J211) DG(I-210):DC(J210) DT(I-209):DA(J209) DC(I-208):DG(J208) DG(I-207):DC(J207) DT(I-206):DA(J206) DA(I-205):DT(J205) DG(I-204):DC(J204) DA(I-203):DT(J203) DC(I-202):DG(J202) DA(I-201):DT(J201) DG(I-200):DC(J200) DC(I-199):DG(J199) DT(I-198):DA(J198) DC(I-197):DG(J197) DT(I-196):DA(J196) DA(I-195):DT(J195) DG(I-194):DC(J194) DC(I-193):DG(J193) DA(I-192):DT(J192) DC(I-191):DG(J191) DC(I-190):DG(J190) DG(I-189):DC(J189) DC(I-188):DG(J188) DT(I-187):DA(J187) DT(I-186):DA(J186) DA(I-185):DT(J185) DA(I-184):DT(J184) DA(I-183):DT(J183) DC(I-182):DG(J182) DG(I-181):DC(J181) DC(I-180):DG(J180) DA(I-179):DT(J179) DC(I-178):DG(J178) DG(I-177):DC(J177) DT(I-176):DA(J176) DA(I-175):DT(J175) DC(I-174):DG(J174) DG(I-173):DC(J173) DC(I-172):DG(J172) DG(I-171):DC(J171) DC(I-170):DG(J170) DT(I-169):DA(J169) DG(I-168):DC(J168) DT(I-167):DA(J167) DC(I-166):DG(J166) DC(I-165):DG(J165) DC(I-164):DG(J164) DC(I-163):DG(J163) DC(I-162):DG(J162) DG(I-161):DC(J161) DC(I-160):DG(J160) DG(I-159):DC(J159) DT(I-158):DA(J158) DT(I-157):DA(J157) DT(I-156):DA(J156) DT(I-155):DA(J155) DA(I-154):DT(J154) DA(I-153):DT(J153) DC(I-152):DG(J152) DC(I-151):DG(J151) DG(I-150):DC(J150) DC(I-149):DG(J149) DC(I-148):DG(J148) DA(I-147):DT(J147) DA(I-146):DT(J146) DG(I-145):DC(J145) DG(I-144):DC(J144) DG(I-143):DC(J143) DG(I-142):DC(J142) DA(I-141):DT(J141) DT(I-140):DA(J140) DT(I-139):DA(J139) DA(I-138):DT(J138) DC(I-137):DG(J137) DT(I-136):DA(J136) DC(I-135):DG(J135) DC(I-134):DG(J134) DC(I-133):DG(J133) DT(I-132):DA(J132) DA(I-131):DT(J131) DG(I-130):DC(J130) DT(I-129):DA(J129) DC(I-128):DG(J128) DT(I-127):DA(J127) DC(I-126):DG(J126) DC(I-125):DG(J125) DA(I-124):DT(J124) DG(I-123):DC(J123) DG(I-122):DC(J122) DC(I-121):DG(J121) DA(I-120):DT(J120) DC(I-119):DG(J119) DG(I-118):DC(J118) DT(I-117):DA(J117) DG(I-116):DC(J116) DT(I-115):DA(J115) DC(I-114):DG(J114) DA(I-113):DT(J113) DG(I-112):DC(J112) DA(I-111):DT(J111) DT(I-110):DA(J110) DA(I-109):DT(J109) DT(I-108):DA(J108) DA(I-107):DT(J107) DT(I-106):DA(J106) DA(I-105):DT(J105) DC(I-104):DG(J104) DA(I-103):DT(J103) DT(I-102):DA(J102) DC(I-101):DG(J101) DG(I-100):DC(J100) DA(I-99):DT(J99) DT(I-98):DA(J98) DT(I-97):DA(J97) DG(I-96):DC(J96) DG(I-95):DC(J95) DA(I-94):DT(J94) DT(I-93):DA(J93) DA(I-92):DT(J92) DG(I-91):DC(J91) DG(I-90):DC(J90) DC(I-89):DG(J89) DC(I-88):DG(J88) DC(I-87):DG(J87) DG(I-86):DC(J86) DG(I-85):DC(J85) DA(I-84):DT(J84) DC(I-83):DG(J83) DG(I-82):DC(J82) DG(I-81):DC(J81) DC(I-80):DG(J80) DC(I-79):DG(J79) DT(I-78):DA(J78) DG(I-77):DC(J77) DG(I-76):DC(J76) DA(I-75):DT(J75) DT(I-74):DA(J74) DA(I-73):DT(J73) DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) DT(I73):DA(J-73) DG(I74):DC(J-74) DG(I75):DC(J-75) DA(I76):DT(J-76) DT(I77):DA(J-77) DA(I78):DT(J-78) DG(I79):DC(J-79) DG(I80):DC(J-80) DC(I81):DG(J-81) DC(I82):DG(J-82) DC(I83):DG(J-83) DC(I84):DG(J-84) DA(I85):DT(J-85) DA(I86):DT(J-86) DC(I87):DG(J-87) DG(I88):DC(J-88) DG(I89):DC(J-89) DC(I90):DG(J-90) DC(I91):DG(J-91) DT(I92):DA(J-92) DG(I93):DC(J-93) DG(I94):DC(J-94) DA(I95):DT(J-95) DT(I96):DA(J-96) DA(I97):DT(J-97) DA(I98):DT(J-98) DT(I99):DA(J-99) DC(I100):DG(J-100) DA(I101):DT(J-101) DG(I102):DC(J-102) DA(I103):DT(J-103) DA(I104):DT(J-104) DT(I105):DA(J-105) DC(I106):DG(J-106) DC(I107):DG(J-107) DC(I108):DG(J-108) DG(I109):DC(J-109) DG(I110):DC(J-110) DT(I111):DA(J-111) DG(I112):DC(J-112) DC(I113):DG(J-113) DC(I114):DG(J-114) DG(I115):DC(J-115) DA(I116):DT(J-116) DG(I117):DC(J-117) DG(I118):DC(J-118) DC(I119):DG(J-119) DC(I120):DG(J-120) DG(I121):DC(J-121) DC(I122):DG(J-122) DT(I123):DA(J-123) DC(I124):DG(J-124) DA(I125):DT(J-125) DA(I126):DT(J-126) DT(I127):DA(J-127) DT(I128):DA(J-128) DG(I129):DC(J-129) DG(I130):DC(J-130) DT(I131):DA(J-131) DC(I132):DG(J-132) DG(I133):DC(J-133) DT(I134):DA(J-134) DA(I135):DT(J-135) DG(I136):DC(J-136) DA(I137):DT(J-137) DC(I138):DG(J-138) DA(I139):DT(J-139) DG(I140):DC(J-140) DC(I141):DG(J-141) DT(I142):DA(J-142) DC(I143):DG(J-143) DT(I144):DA(J-144) DA(I145):DT(J-145) DG(I146):DC(J-146) DC(I147):DG(J-147) DA(I148):DT(J-148) DC(I149):DG(J-149) DC(I150):DG(J-150) DG(I151):DC(J-151) DC(I152):DG(J-152) DT(I153):DA(J-153) DT(I154):DA(J-154) DA(I155):DT(J-155) DA(I156):DT(J-156) DA(I157):DT(J-157) DC(I158):DG(J-158) DG(I159):DC(J-159) DC(I160):DG(J-160) DA(I161):DT(J-161) DC(I162):DG(J-162) DG(I163):DC(J-163) DT(I164):DA(J-164) DA(I165):DT(J-165) DC(I166):DG(J-166) DG(I167):DC(J-167) DC(I168):DG(J-168) DG(I169):DC(J-169) DC(I170):DG(J-170) DT(I171):DA(J-171) DG(I172):DC(J-172) DT(I173):DA(J-173) DC(I174):DG(J-174) DC(I175):DG(J-175) DC(I176):DG(J-176) DC(I177):DG(J-177) DC(I178):DG(J-178) DG(I179):DC(J-179) DC(I180):DG(J-180) DG(I181):DC(J-181) DT(I182):DA(J-182) DT(I183):DA(J-183) DT(I184):DA(J-184) DT(I185):DA(J-185) DA(I186):DT(J-186) DA(I187):DT(J-187) DC(I188):DG(J-188) DC(I189):DG(J-189) DG(I190):DC(J-190) DC(I191):DG(J-191) DC(I192):DG(J-192) DA(I193):DT(J-193) DA(I194):DT(J-194) DG(I195):DC(J-195) DG(I196):DC(J-196) DG(I197):DC(J-197) DG(I198):DC(J-198) DA(I199):DT(J-199) DT(I200):DA(J-200) DT(I201):DA(J-201) DA(I202):DT(J-202) DC(I203):DG(J-203) DT(I204):DA(J-204) DC(I205):DG(J-205) DC(I206):DG(J-206) DC(I207):DG(J-207) DT(I208):DA(J-208) DA(I209):DT(J-209) DG(I210):DC(J-210) DT(I211):DA(J-211) DC(I212):DG(J-212) DT(I213):DA(J-213) DC(I214):DG(J-214) DC(I215):DG(J-215) DA(I216):DT(J-216) DG(I217):DC(J-217) DG(I218):DC(J-218) DC(I219):DG(J-219) DA(I220):DT(J-220) DC(I221):DG(J-221) DG(I222):DC(J-222) DT(I223):DA(J-223) DG(I224):DC(J-224) DT(I225):DA(J-225) DC(I226):DG(J-226) DA(I227):DT(J-227) DG(I228):DC(J-228) DA(I229):DT(J-229) DT(I230):DA(J-230) DA(I231):DT(J-231) DT(I232):DA(J-232) DA(I233):DT(J-233) DT(I234):DA(J-234) DA(I235):DT(J-235) DC(I236):DG(J-236) DA(I237):DT(J-237) DT(I238):DA(J-238) DC(I239):DG(J-239) DG(I240):DC(J-240) DA(I241):DT(J-241) DT(I242):DA(J-242) chainD ( 8) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esysiyvYkvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6l6l_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL BASIS OF NR4A2 HOMODIMERS BINDING TO SELECTIVE NUR- RESPONSIVE ELEMENTS organism=HOMO SAPIENS DNA sequence DA(C2):DT(D21) DA(C3):DT(D20) DG(C4):DC(D19) DG(C5):DC(D18) DT(C6):DA(D17) DC(C7):DG(D16) DA(C8):DT(D15) DA(C9):DT(D14) DA(C10):DT(D13) DC(C11):DG(D12) DT(C12):DA(D11) DG(C13):DC(D10) DT(C14):DA(D9) DG(C15):DC(D8) DA(C16):DT(D7) DC(C17):DG(D6) DC(C18):DG(D5) DT(C19):DA(D4) DA(C20):DT(D3) DT(C21):DA(D2) chainA ( 11) CYS272 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) GLU281 0 0 2 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LYS284 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS288 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG289 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG342 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lcavcgdnaaCqhygvrtcEgcKgffKRtvqknakyvclankncpvdkrrrnrcqycrfqkclavgmvkevvrtdslkgrRgrlp >6l6l_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL BASIS OF NR4A2 HOMODIMERS BINDING TO SELECTIVE NUR- RESPONSIVE ELEMENTS organism=HOMO SAPIENS DNA sequence DA(C2):DT(D21) DA(C3):DT(D20) DG(C4):DC(D19) DG(C5):DC(D18) DT(C6):DA(D17) DC(C7):DG(D16) DA(C8):DT(D15) DA(C9):DT(D14) DA(C10):DT(D13) DC(C11):DG(D12) DT(C12):DA(D11) DG(C13):DC(D10) DT(C14):DA(D9) DG(C15):DC(D8) DA(C16):DT(D7) DC(C17):DG(D6) DC(C18):DG(D5) DT(C19):DA(D4) DA(C20):DT(D3) DT(C21):DA(D2) chainA ( 11) CYS272 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) GLU281 0 0 2 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LYS284 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS288 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG289 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG342 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 11) CYS272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 20) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 1 0 0 0 ( 23) LYS284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 ( 27) LYS288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 28) ARG289 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 ( 81) ARG342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 0 0 ( 83) ARG344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence lcavcgdnaaCqhygvrtcEgcKgffKRtvqknakyvclankncpvdkrrrnrcqycrfqkclavgmvkevvrtdslkgrRgrlp/lcavcgdnaaCqhygvrtcEgcKgffKRtvqknakyvclankncpvdkrrrnrcqycrfqkclavgmvkevvrtdslkgrRgRl >6l6q_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL BASIS OF NR4A2 HOMODIMERS BINDING TO SELECTIVE NUR- RESPONSIVE ELEMENTS organism=HOMO SAPIENS DNA sequence DA(F1):DT(C20) DG(F2):DC(C19) DT(F3):DA(C18) DG(F4):DC(C17) DA(F5):DT(C16) DC(F6):DG(C15) DC(F7):DG(C14) DT(F8):DA(C13) DT(F9):DA(C12) DT(F10):DA(C11) DA(F11):DT(C10) DA(F12):DT(C9) DA(F13):DT(C8) DG(F14):DC(C7) DG(F15):DC(C6) DT(F16):DA(C5) DC(F17):DG(C4) DA(F18):DT(C3) DC(F19):DG(C2) DT(F20):DA(C1) chainA ( 11) CYS272 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 20) GLU281 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LYS284 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS288 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG289 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG342 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG344 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 chainB ( 11) CYS272 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 20) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 8 0 0 0 0 ( 23) LYS284 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 ( 27) LYS288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 28) ARG289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 ( 81) ARG342 0 0 0 0 0 0 0 0 0 0 0 1 14 11 0 0 0 0 0 0 ( 83) ARG344 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 prot.sequence lcavcgdnaaCqhygvrtcEgcKgffKRtvqknakyvclankncpvdkrrrnrcqycrfqkclavgmvkevvrtdslkgrRgRlp/lcavcgdnaaCqhygvrtcEgcKgffKRtvqknakyvclankncpvdkrrrnrcqycrfqkclavgmvkevvrtdslkgrRgRlp >6l6q_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL BASIS OF NR4A2 HOMODIMERS BINDING TO SELECTIVE NUR- RESPONSIVE ELEMENTS organism=HOMO SAPIENS DNA sequence DA(F1):DT(C20) DG(F2):DC(C19) DT(F3):DA(C18) DG(F4):DC(C17) DA(F5):DT(C16) DC(F6):DG(C15) DC(F7):DG(C14) DT(F8):DA(C13) DT(F9):DA(C12) DT(F10):DA(C11) DA(F11):DT(C10) DA(F12):DT(C9) DA(F13):DT(C8) DG(F14):DC(C7) DG(F15):DC(C6) DT(F16):DA(C5) DC(F17):DG(C4) DA(F18):DT(C3) DC(F19):DG(C2) DT(F20):DA(C1) chainB ( 11) CYS272 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 20) GLU281 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 8 0 0 0 0 ( 23) LYS284 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 ( 27) LYS288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 28) ARG289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 ( 81) ARG342 0 0 0 0 0 0 0 0 0 0 0 1 14 11 0 0 0 0 0 0 ( 83) ARG344 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 prot.sequence lcavcgdnaaCqhygvrtcEgcKgffKRtvqknakyvclankncpvdkrrrnrcqycrfqkclavgmvkevvrtdslkgrRgRlp >6l6y_F:HMG-box; title=CRYSTAL STRUCTURE OF PLURIPOTENCY REPROGRAMMING FACTOR SOX17 MUTANT (SOX17EK) HMG DOMAIN BOUND TO DNA organism=Mus musculus DNA sequence DG(C1):DC(E16) DT(C2):DA(E15) DC(C3):DG(E14) DT(C4):DA(E13) DC(C5):DG(E12) DT(C6):DA(E11) DA(C7):DT(E10) DT(C8):DA(E9) DT(C9):DA(E8) DG(C10):DC(E7) DT(C11):DA(E6) DC(C12):DG(E5) DC(C13):DG(E4) DT(C14):DA(E3) DG(C15):DC(E2) chainF ( 9) ARG70 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 ( 12) ASN73 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 ( 14) PHE75 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 ( 15) MET76 0 0 0 0 0 0 0 16 5 0 0 0 0 0 0 ( 22) ARG83 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 ( 33) HIS94 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 ( 34) ASN95 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 ( 35) ALA96 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 38) SER99 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 ( 76) TYR137 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 prot.sequence gsftsrirRpmNaFMvwakdeRkrlaqqnpdlHNAelSkmlgkswkaltlaekrpfveeakrlrvqhmqdhpnykYrprr >6l74_CDF: title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-TRIPHOSPHATE RNA OF 2 NT organism=? DNA sequence DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) chainC (416) ARG422 0 0 0 0 0 0 0 0 0 9 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapGdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6l74_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THERMUS THERMOPHILUS INITIAL TRANSCRIPTION COMPLEX COMPRISING SIGMA A AND 5'-TRIPHOSPHATE RNA OF 2 NT organism=? DNA sequence DG(H9):DG(G19) DA(H10):DA(G18) DG(H11):DG(G17) DC(H12):DC(G16) DT(H13):DT(G15) DG(H14):DG(G14) DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) chainD (626) ARG628 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (703) ALA705 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea >6l84_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=COMPLEX OF DNA POLYMERASE IV AND D-DNA DUPLEX organism=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) / Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) DNA sequence DG(P1):DC(T15) DG(P2):DC(T14) DG(P3):DC(T13) DG(P4):DC(T12) DG(P5):DC(T11) DA(P6):DT(T10) DA(P7):DT(T9) DG(P8):DC(T8) DG(P9):DC(T7) DA(P10):DT(T6) DT(P11):DA(T5) DT(P12):DA(T4) DC(P13):DG(T3) DC(P14):DG(T2) chainA ( 12) TYR12 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 44) ALA44 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (189) ILE189 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (244) SER244 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (285) HIS285 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (332) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (336) ARG336 0 0 0 0 0 0 0 0 0 1 5 0 0 0 prot.sequence mivlfvdfdyfYaqveevlnpslkgkpvvvcVfsgrfedsgAvAtanyearkfgvkAgipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignItaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaiHvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >6l8e_ABCD:YefM-like; title=CRYSTAL STRUCTURE OF HETEROHEXAMERIC YOEB-YEFM COMPLEX BOUND TO 26BP- DNA organism=STAPHYLOCOCCUS AUREUS SUBSP. AUREUS NCTC 8325 DNA sequence DA(H3):DT(G24) DT(H4):DA(G23) DT(H5):DA(G22) DG(H6):DC(G21) DT(H7):DA(G20) DA(H8):DT(G19) DC(H9):DG(G18) DA(H10):DT(G17) DA(H11):DT(G16) DA(H12):DT(G15) DT(H13):DA(G14) DA(H14):DT(G13) DT(H15):DA(G12) DC(H16):DG(G11) DT(H17):DA(G10) DG(H18):DC(G9) DT(H19):DA(G8) DA(H20):DT(G7) DC(H21):DG(G6) DA(H22):DT(G5) DA(H23):DT(G4) DT(H24):DA(G3) chainA ( 6) TYR6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 7) SER7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 14 0 0 ( 11) GLN11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 chainB ( 6) TYR6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 ( 7) SER7 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 11 7 0 0 0 0 0 ( 11) GLN11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 2 0 0 0 0 chainC ( 6) TYR6 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) SER7 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 14 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) GLN11 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 6) TYR6 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) SER7 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 7 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) GLN11 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence miiknYSyaRQnlkalmtkvnddsdmvtvtstddknvvimsesdynsmmetlylqqnpnnaehlaqsiadlergktitkdidv/miiknYSyaRQnlkalmtkvnddsdmvtvtstddknvvimsesdynsmmetlyl/miiknYSyaRQnlkalmtkvnddsdmvtvtstddknvvimsesdynsmmetlylqqnpnnaehlaqsiadlergktitkdidv/miiknYSyaRQnlkalmtkvnddsdmvtvtstddknvvimsesdynsmmetlylq >6l8e_C:YefM-like; title=CRYSTAL STRUCTURE OF HETEROHEXAMERIC YOEB-YEFM COMPLEX BOUND TO 26BP- DNA organism=STAPHYLOCOCCUS AUREUS SUBSP. AUREUS NCTC 8325 DNA sequence DA(H3):DT(G24) DT(H4):DA(G23) DT(H5):DA(G22) DG(H6):DC(G21) DT(H7):DA(G20) DA(H8):DT(G19) DC(H9):DG(G18) DA(H10):DT(G17) DA(H11):DT(G16) DA(H12):DT(G15) DT(H13):DA(G14) DA(H14):DT(G13) DT(H15):DA(G12) DC(H16):DG(G11) DT(H17):DA(G10) DG(H18):DC(G9) DT(H19):DA(G8) DA(H20):DT(G7) DC(H21):DG(G6) DA(H22):DT(G5) DA(H23):DT(G4) DT(H24):DA(G3) chainC ( 6) TYR6 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) SER7 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 14 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) GLN11 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence miiknYSyaRQnlkalmtkvnddsdmvtvtstddknvvimsesdynsmmetlylqqnpnnaehlaqsiadlergktitkdidv >6l8e_IJKL:YefM-like; title=CRYSTAL STRUCTURE OF HETEROHEXAMERIC YOEB-YEFM COMPLEX BOUND TO 26BP- DNA organism=STAPHYLOCOCCUS AUREUS SUBSP. AUREUS NCTC 8325 DNA sequence DA(O3):DT(P24) DT(O4):DA(P23) DT(O5):DA(P22) DG(O6):DC(P21) DT(O7):DA(P20) DA(O8):DT(P19) DC(O9):DG(P18) DA(O10):DT(P17) DG(O11):DC(P16) DA(O12):DT(P15) DT(O13):DA(P14) DA(O14):DT(P13) DT(O15):DA(P12) DT(O16):DA(P11) DT(O17):DA(P10) DG(O18):DC(P9) DT(O19):DA(P8) DA(O20):DT(P7) DC(O21):DG(P6) DA(O22):DT(P5) DA(O23):DT(P4) DT(O24):DA(P3) chainI ( 6) TYR6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 7) SER7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 11 13 0 0 ( 11) GLN11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 chainJ ( 6) TYR6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 ( 7) SER7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 14 10 0 0 0 0 0 ( 11) GLN11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 chainK ( 6) TYR6 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) SER7 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 11 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) GLN11 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 6) TYR6 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) SER7 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 9 10 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) GLN11 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence miiknYSyaRQnlkalmtkvnddsdmvtvtstddknvvimsesdynsmmetlylqqnpnnaehlaqsiadlergktitkdidv/miiknYSyaRQnlkalmtkvnddsdmvtvtstddknvvimsesdynsmmetlylqqnpn/miiknYSyaRQnlkalmtkvnddsdmvtvtstddknvvimsesdynsmmetlylqqnpnnaehlaqsiadlergktitkdidv/miiknYSyaRQnlkalmtkvnddsdmvtvtstddknvvimsesdynsmmetlylqqn >6l9h_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE HUMAN TELOMERIC NUCLEOSOME DISPLAYS DISTINCT STRUCTURAL AND DYNAMIC PROPERTIES organism=HOMO SAPIENS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DT(I-69):DA(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DG(I-66):DC(J66) DG(I-65):DC(J64) DT(I-63):DA(J63) DT(I-62):DA(J62) DA(I-61):DT(J61) DG(I-60):DC(J60) DG(I-59):DC(J59) DG(I-58):DC(J58) DT(I-57):DA(J57) DT(I-56):DA(J56) DA(I-55):DT(J55) DG(I-54):DC(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DT(I-51):DA(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DG(I-48):DC(J48) DG(I-47):DC(J47) DG(I-46):DC(J46) DT(I-45):DA(J45) DT(I-44):DA(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DT(I-38):DA(J38) DA(I-37):DT(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DT(I-33):DA(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DG(I-30):DC(J29) DG(I-28):DC(J28) DT(I-27):DA(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DG(I-23):DC(J23) DG(I-22):DC(J22) DT(I-21):DA(J21) DT(I-20):DA(J20) DA(I-19):DT(J19) DG(I-18):DC(J18) DG(I-17):DC(J17) DG(I-16):DC(J16) DT(I-15):DA(J15) DT(I-14):DA(J14) DA(I-13):DT(J13) DG(I-12):DC(J12) DG(I-11):DC(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DT(I-3):DA(J3) DA(I-1):DT(J1) DG(I0):DC(J0) DG(I1):DC(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DT(I4):DA(J-4) DA(I5):DT(J-5) DG(I6):DC(J-6) DG(I7):DC(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DT(I10):DA(J-10) DA(I11):DT(J-11) DG(I12):DC(J-12) DG(I13):DC(J-13) DG(I14):DC(J-14) DT(I15):DA(J-15) DT(I16):DA(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DG(I19):DC(J-19) DG(I20):DC(J-20) DT(I21):DA(J-21) DT(I22):DA(J-22) DA(I23):DT(J-23) DG(I24):DC(J-25) DG(I26):DC(J-26) DT(I27):DA(J-27) DT(I28):DA(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DG(I31):DC(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DT(I34):DA(J-34) DA(I35):DT(J-35) DG(I36):DC(J-36) DG(I37):DC(J-37) DG(I38):DC(J-38) DT(I39):DA(J-39) DT(I40):DA(J-40) DA(I41):DT(J-41) DG(I42):DC(J-42) DG(I43):DC(J-43) DG(I44):DC(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DG(I50):DC(J-50) DT(I51):DA(J-51) DT(I52):DA(J-52) DA(I53):DT(J-53) DG(I54):DC(J-54) DG(I55):DC(J-55) DG(I56):DC(J-56) DT(I57):DA(J-57) DT(I58):DA(J-58) DA(I59):DT(J-59) DG(I60):DC(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DG(I66):DC(J-66) DG(I67):DC(J-67) DG(I68):DC(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) TYR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysvyvYkvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/RyrPgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6l9h_B:Histone-fold; title=THE HUMAN TELOMERIC NUCLEOSOME DISPLAYS DISTINCT STRUCTURAL AND DYNAMIC PROPERTIES organism=HOMO SAPIENS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DC(J-68):DG(I68) DC(J-67):DG(I67) DC(J-66):DG(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DA(J-58):DT(I58) DA(J-57):DT(I57) DC(J-56):DG(I56) DC(J-55):DG(I55) DC(J-54):DG(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DA(J-51):DT(I51) DC(J-50):DG(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DC(J-44):DG(I44) DC(J-43):DG(I43) DC(J-42):DG(I42) DT(J-41):DA(I41) DA(J-40):DT(I40) DA(J-39):DT(I39) DC(J-38):DG(I38) DC(J-37):DG(I37) DC(J-36):DG(I36) DT(J-35):DA(I35) DA(J-34):DT(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DC(J-31):DG(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DA(J-28):DT(I28) DA(J-27):DT(I27) DC(J-26):DG(I26) DC(J-25):DG(I24) DT(J-23):DA(I23) DA(J-22):DT(I22) DA(J-21):DT(I21) DC(J-20):DG(I20) DC(J-19):DG(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DA(J-16):DT(I16) DA(J-15):DT(I15) DC(J-14):DG(I14) DC(J-13):DG(I13) DC(J-12):DG(I12) DT(J-11):DA(I11) DA(J-10):DT(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DC(J-7):DG(I7) DC(J-6):DG(I6) DT(J-5):DA(I5) DA(J-4):DT(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DC(J-1):DG(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DA(J3):DT(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DC(J11):DG(I-11) DC(J12):DG(I-12) DT(J13):DA(I-13) DA(J14):DT(I-14) DA(J15):DT(I-15) DC(J16):DG(I-16) DC(J17):DG(I-17) DC(J18):DG(I-18) DT(J19):DA(I-19) DA(J20):DT(I-20) DA(J21):DT(I-21) DC(J22):DG(I-22) DC(J23):DG(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DA(J27):DT(I-27) DC(J28):DG(I-28) DC(J29):DG(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DA(J33):DT(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DT(J37):DA(I-37) DA(J38):DT(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DA(J44):DT(I-44) DA(J45):DT(I-45) DC(J46):DG(I-46) DC(J47):DG(I-47) DC(J48):DG(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DA(J51):DT(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DC(J54):DG(I-54) DT(J55):DA(I-55) DA(J56):DT(I-56) DA(J57):DT(I-57) DC(J58):DG(I-58) DC(J59):DG(I-59) DC(J60):DG(I-60) DT(J61):DA(I-61) DA(J62):DT(I-62) DA(J63):DT(I-63) DC(J64):DG(I-65) DC(J66):DG(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DA(J69):DT(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainB ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >6l9z_C:Histone-fold; title=338 BP DI-NUCLEOSOME ASSEMBLED WITH LINKER HISTONE H1.X organism=? DNA sequence DA(J1):DT(I338) DT(J2):DA(I337) DC(J3):DG(I336) DG(J4):DC(I335) DC(J5):DG(I334) DG(J6):DC(I333) DG(J7):DC(I332) DT(J8):DA(I331) DT(J9):DA(I330) DT(J10):DA(I329) DT(J11):DA(I328) DT(J12):DA(I327) DT(J13):DA(I326) DT(J14):DA(I325) DT(J15):DA(I324) DC(J16):DG(I323) DA(J17):DT(I322) DT(J18):DA(I321) DG(J19):DC(I320) DT(J20):DA(I319) DG(J21):DC(I318) DC(J22):DG(I317) DC(J23):DG(I316) DG(J24):DC(I315) DG(J25):DC(I314) DT(J26):DA(I313) DC(J27):DG(I312) DT(J28):DA(I311) DC(J29):DG(I310) DA(J30):DT(I309) DC(J31):DG(I308) DA(J32):DT(I307) DC(J33):DG(I306) DG(J34):DC(I305) DT(J35):DA(I304) DG(J36):DC(I303) DC(J37):DG(I302) DC(J38):DG(I301) DT(J39):DA(I300) DG(J40):DC(I299) DG(J41):DC(I298) DA(J42):DT(I297) DG(J43):DC(I296) DA(J44):DT(I295) DC(J45):DG(I294) DT(J46):DA(I293) DA(J47):DT(I292) DG(J48):DC(I291) DT(J49):DA(I290) DA(J50):DT(I289) DA(J51):DT(I288) DG(J52):DC(I287) DC(J53):DG(I286) DG(J54):DC(I285) DC(J55):DG(I284) DT(J56):DA(I283) DT(J57):DA(I282) DC(J58):DG(I281) DT(J59):DA(I280) DA(J60):DT(I279) DG(J61):DC(I278) DT(J62):DA(I277) DG(J63):DC(I276) DG(J64):DC(I275) DC(J65):DG(I274) DG(J66):DC(I273) DG(J67):DC(I272) DT(J68):DA(I271) DT(J69):DA(I270) DA(J70):DT(I269) DA(J71):DT(I268) DA(J72):DT(I267) DA(J73):DT(I266) DC(J74):DG(I265) DG(J75):DC(I264) DC(J76):DG(I263) DG(J77):DC(I262) DG(J78):DC(I261) DT(J79):DA(I260) DA(J80):DT(I259) DG(J81):DC(I258) DA(J82):DT(I257) DC(J83):DG(I256) DA(J84):DT(I255) DG(J85):DC(I254) DC(J86):DG(I253) DG(J87):DC(I252) DC(J88):DG(I251) DG(J89):DC(I250) DT(J90):DA(I249) DA(J91):DT(I248) DC(J92):DG(I247) DG(J93):DC(I246) DT(J94):DA(I245) DG(J95):DC(I244) DC(J96):DG(I243) DG(J97):DC(I242) DT(J98):DA(I241) DT(J99):DA(I240) DT(J100):DA(I239) DA(J101):DT(I238) DA(J102):DT(I237) DG(J103):DC(I236) DC(J104):DG(I235) DG(J105):DC(I234) DG(J106):DC(I233) DT(J107):DA(I232) DG(J108):DC(I231) DC(J109):DG(I230) DT(J110):DA(I229) DA(J111):DT(I228) DG(J112):DC(I227) DA(J113):DT(I226) DG(J114):DC(I225) DC(J115):DG(I224) DT(J116):DA(I223) DG(J117):DC(I222) DT(J118):DA(I221) DC(J119):DG(I220) DT(J120):DA(I219) DA(J121):DT(I218) DC(J122):DG(I217) DG(J123):DC(I216) DA(J124):DT(I215) DC(J125):DG(I214) DC(J126):DG(I213) DA(J127):DT(I212) DA(J128):DT(I211) DT(J129):DA(I210) DT(J130):DA(I209) DG(J131):DC(I208) DA(J132):DT(I207) DG(J133):DC(I206) DC(J134):DG(I205) DG(J135):DC(I204) DG(J136):DC(I203) DC(J137):DG(I202) DC(J138):DG(I201) DT(J139):DA(I200) DC(J140):DG(I199) DG(J141):DC(I198) DG(J142):DC(I197) DC(J143):DG(I196) DA(J144):DT(I195) DC(J145):DG(I194) DC(J146):DG(I193) DG(J147):DC(I192) DG(J148):DC(I191) DG(J149):DC(I190) DA(J150):DT(I189) DT(J151):DA(I188) DG(J152):DC(I187) DC(J153):DG(I186) DG(J154):DC(I185) DT(J155):DA(I184) DT(J156):DA(I183) DT(J157):DA(I182) DT(J158):DA(I181) DT(J159):DA(I180) DT(J160):DA(I179) DT(J161):DA(I178) DT(J162):DA(I177) DT(J163):DA(I176) DT(J164):DA(I175) DG(J165):DC(I174) DC(J166):DG(I173) DG(J167):DC(I172) DC(J168):DG(I171) DT(J169):DA(I170) DC(J170):DG(I169) DC(J171):DG(I168) DT(J172):DA(I167) DG(J173):DC(I166) DC(J174):DG(I165) DT(J175):DA(I164) DT(J176):DA(I163) DT(J177):DA(I162) DT(J178):DA(I161) DT(J179):DA(I160) DT(J180):DA(I159) DT(J181):DA(I158) DT(J182):DA(I157) DT(J183):DA(I156) DT(J184):DA(I155) DC(J185):DG(I154) DA(J186):DT(I153) DT(J187):DA(I152) DG(J188):DC(I151) DT(J189):DA(I150) DG(J190):DC(I149) DC(J191):DG(I148) DC(J192):DG(I147) DG(J193):DC(I146) DG(J194):DC(I145) DT(J195):DA(I144) DC(J196):DG(I143) DT(J197):DA(I142) DC(J198):DG(I141) DA(J199):DT(I140) DC(J200):DG(I139) DA(J201):DT(I138) DC(J202):DG(I137) DG(J203):DC(I136) DT(J204):DA(I135) DG(J205):DC(I134) DC(J206):DG(I133) DC(J207):DG(I132) DT(J208):DA(I131) DG(J209):DC(I130) DG(J210):DC(I129) DA(J211):DT(I128) DG(J212):DC(I127) DA(J213):DT(I126) DC(J214):DG(I125) DT(J215):DA(I124) DA(J216):DT(I123) DG(J217):DC(I122) DT(J218):DA(I121) DA(J219):DT(I120) DA(J220):DT(I119) DG(J221):DC(I118) DC(J222):DG(I117) DG(J223):DC(I116) DC(J224):DG(I115) DT(J225):DA(I114) DT(J226):DA(I113) DC(J227):DG(I112) DT(J228):DA(I111) DA(J229):DT(I110) DG(J230):DC(I109) DT(J231):DA(I108) DG(J232):DC(I107) DG(J233):DC(I106) DC(J234):DG(I105) DG(J235):DC(I104) DG(J236):DC(I103) DT(J237):DA(I102) DT(J238):DA(I101) DA(J239):DT(I100) DA(J240):DT(I99) DA(J241):DT(I98) DA(J242):DT(I97) DC(J243):DG(I96) DG(J244):DC(I95) DC(J245):DG(I94) DG(J246):DC(I93) DG(J247):DC(I92) DT(J248):DA(I91) DA(J249):DT(I90) DG(J250):DC(I89) DA(J251):DT(I88) DC(J252):DG(I87) DA(J253):DT(I86) DG(J254):DC(I85) DC(J255):DG(I84) DG(J256):DC(I83) DC(J257):DG(I82) DG(J258):DC(I81) DT(J259):DA(I80) DA(J260):DT(I79) DC(J261):DG(I78) DG(J262):DC(I77) DT(J263):DA(I76) DG(J264):DC(I75) DC(J265):DG(I74) DG(J266):DC(I73) DT(J267):DA(I72) DT(J268):DA(I71) DT(J269):DA(I70) DA(J270):DT(I69) DA(J271):DT(I68) DG(J272):DC(I67) DC(J273):DG(I66) DG(J274):DC(I65) DG(J275):DC(I64) DT(J276):DA(I63) DG(J277):DC(I62) DC(J278):DG(I61) DT(J279):DA(I60) DA(J280):DT(I59) DG(J281):DC(I58) DA(J282):DT(I57) DG(J283):DC(I56) DC(J284):DG(I55) DT(J285):DA(I54) DG(J286):DC(I53) DT(J287):DA(I52) DC(J288):DG(I51) DT(J289):DA(I50) DA(J290):DT(I49) DC(J291):DG(I48) DG(J292):DC(I47) DA(J293):DT(I46) DC(J294):DG(I45) DC(J295):DG(I44) DA(J296):DT(I43) DA(J297):DT(I42) DT(J298):DA(I41) DT(J299):DA(I40) DG(J300):DC(I39) DA(J301):DT(I38) DG(J302):DC(I37) DC(J303):DG(I36) DG(J304):DC(I35) DG(J305):DC(I34) DC(J306):DG(I33) DC(J307):DG(I32) DT(J308):DA(I31) DC(J309):DG(I30) DG(J310):DC(I29) DG(J311):DC(I28) DC(J312):DG(I27) DA(J313):DT(I26) DC(J314):DG(I25) DC(J315):DG(I24) DG(J316):DC(I23) DG(J317):DC(I22) DG(J318):DC(I21) DA(J319):DT(I20) DT(J320):DA(I19) DG(J321):DC(I18) DC(J322):DG(I17) DG(J323):DC(I16) DT(J324):DA(I15) DT(J325):DA(I14) DT(J326):DA(I13) DT(J327):DA(I12) DT(J328):DA(I11) DT(J329):DA(I10) DT(J330):DA(I9) DT(J331):DA(I8) DC(J332):DG(I7) DC(J333):DG(I6) DG(J334):DC(I5) DC(J335):DG(I4) DG(J336):DC(I3) DA(J337):DT(I2) DT(J338):DA(I1) chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkte >6la2_g:Histone-fold; title=343 BP DI-NUCLEOSOME HARBORING COHESIVE DNA TERMINI ASSEMBLED WITH LINKER HISTONE H1.0 organism=? DNA sequence DC(d1):DG(c339) DG(d2):DC(c338) DC(d3):DG(c337) DT(d4):DA(c336) DG(d5):DC(c335) DT(d6):DA(c334) DT(d7):DA(c333) DT(d8):DA(c332) DT(d9):DA(c331) DT(d10):DA(c330) DT(d11):DA(c329) DT(d12):DA(c328) DT(d13):DA(c327) DC(d14):DG(c326) DA(d15):DT(c325) DT(d16):DA(c324) DG(d17):DC(c323) DT(d18):DA(c322) DG(d19):DC(c321) DC(d20):DG(c320) DC(d21):DG(c319) DG(d22):DC(c318) DG(d23):DC(c317) DT(d24):DA(c316) DC(d25):DG(c315) DT(d26):DA(c314) DC(d27):DG(c313) DA(d28):DT(c312) DC(d29):DG(c311) DA(d30):DT(c310) DC(d31):DG(c309) DG(d32):DC(c308) DT(d33):DA(c307) DG(d34):DC(c306) DC(d35):DG(c305) DC(d36):DG(c304) DT(d37):DA(c303) DG(d38):DC(c302) DG(d39):DC(c301) DA(d40):DT(c300) DG(d41):DC(c299) DA(d42):DT(c298) DC(d43):DG(c297) DT(d44):DA(c296) DA(d45):DT(c295) DG(d46):DC(c294) DT(d47):DA(c293) DA(d48):DT(c292) DA(d49):DT(c291) DG(d50):DC(c290) DC(d51):DG(c289) DG(d52):DC(c288) DC(d53):DG(c287) DT(d54):DA(c286) DT(d55):DA(c285) DC(d56):DG(c284) DT(d57):DA(c283) DA(d58):DT(c282) DG(d59):DC(c281) DT(d60):DA(c280) DG(d61):DC(c279) DG(d62):DC(c278) DC(d63):DG(c277) DG(d64):DC(c276) DG(d65):DC(c275) DT(d66):DA(c274) DT(d67):DA(c273) DA(d68):DT(c272) DA(d69):DT(c271) DA(d70):DT(c270) DA(d71):DT(c269) DC(d72):DG(c268) DG(d73):DC(c267) DC(d74):DG(c266) DG(d75):DC(c265) DG(d76):DC(c264) DT(d77):DA(c263) DA(d78):DT(c262) DG(d79):DC(c261) DA(d80):DT(c260) DC(d81):DG(c259) DA(d82):DT(c258) DG(d83):DC(c257) DC(d84):DG(c256) DG(d85):DC(c255) DC(d86):DG(c254) DG(d87):DC(c253) DT(d88):DA(c252) DA(d89):DT(c251) DC(d90):DG(c250) DG(d91):DC(c249) DT(d92):DA(c248) DG(d93):DC(c247) DC(d94):DG(c246) DG(d95):DC(c245) DT(d96):DA(c244) DT(d97):DA(c243) DT(d98):DA(c242) DA(d99):DT(c241) DA(d100):DT(c240) DG(d101):DC(c239) DC(d102):DG(c238) DG(d103):DC(c237) DG(d104):DC(c236) DT(d105):DA(c235) DG(d106):DC(c234) DC(d107):DG(c233) DT(d108):DA(c232) DA(d109):DT(c231) DG(d110):DC(c230) DA(d111):DT(c229) DG(d112):DC(c228) DC(d113):DG(c227) DT(d114):DA(c226) DG(d115):DC(c225) DT(d116):DA(c224) DC(d117):DG(c223) DT(d118):DA(c222) DA(d119):DT(c221) DC(d120):DG(c220) DG(d121):DC(c219) DA(d122):DT(c218) DC(d123):DG(c217) DC(d124):DG(c216) DA(d125):DT(c215) DA(d126):DT(c214) DT(d127):DA(c213) DT(d128):DA(c212) DG(d129):DC(c211) DA(d130):DT(c210) DG(d131):DC(c209) DC(d132):DG(c208) DG(d133):DC(c207) DG(d134):DC(c206) DC(d135):DG(c205) DC(d136):DG(c204) DT(d137):DA(c203) DC(d138):DG(c202) DG(d139):DC(c201) DG(d140):DC(c200) DC(d141):DG(c199) DA(d142):DT(c198) DC(d143):DG(c197) DC(d144):DG(c196) DG(d145):DC(c195) DG(d146):DC(c194) DG(d147):DC(c193) DA(d148):DT(c192) DT(d149):DA(c191) DG(d150):DC(c190) DC(d151):DG(c189) DG(d152):DC(c188) DT(d153):DA(c187) DT(d154):DA(c186) DT(d155):DA(c185) DT(d156):DA(c184) DT(d157):DA(c183) DT(d158):DA(c182) DT(d159):DA(c181) DT(d160):DA(c180) DT(d161):DA(c179) DT(d162):DA(c178) DC(d163):DG(c177) DA(d164):DT(c176) DT(d165):DA(c175) DA(d166):DT(c174) DC(d167):DG(c173) DT(d168):DA(c172) DC(d169):DG(c171) DG(d170):DC(c170) DA(d171):DT(c169) DG(d172):DC(c168) DC(d173):DG(c167) DA(d174):DT(c166) DT(d175):DA(c165) DG(d176):DC(c164) DC(d177):DG(c163) DT(d178):DA(c162) DT(d179):DA(c161) DT(d180):DA(c160) DT(d181):DA(c159) DT(d182):DA(c158) DT(d183):DA(c157) DT(d184):DA(c156) DT(d185):DA(c155) DT(d186):DA(c154) DT(d187):DA(c153) DC(d188):DG(c152) DA(d189):DT(c151) DT(d190):DA(c150) DG(d191):DC(c149) DT(d192):DA(c148) DG(d193):DC(c147) DC(d194):DG(c146) DC(d195):DG(c145) DG(d196):DC(c144) DG(d197):DC(c143) DT(d198):DA(c142) DC(d199):DG(c141) DT(d200):DA(c140) DC(d201):DG(c139) DA(d202):DT(c138) DC(d203):DG(c137) DA(d204):DT(c136) DC(d205):DG(c135) DG(d206):DC(c134) DT(d207):DA(c133) DG(d208):DC(c132) DC(d209):DG(c131) DC(d210):DG(c130) DT(d211):DA(c129) DG(d212):DC(c128) DG(d213):DC(c127) DA(d214):DT(c126) DG(d215):DC(c125) DA(d216):DT(c124) DC(d217):DG(c123) DT(d218):DA(c122) DA(d219):DT(c121) DG(d220):DC(c120) DT(d221):DA(c119) DA(d222):DT(c118) DA(d223):DT(c117) DG(d224):DC(c116) DC(d225):DG(c115) DG(d226):DC(c114) DC(d227):DG(c113) DT(d228):DA(c112) DT(d229):DA(c111) DC(d230):DG(c110) DT(d231):DA(c109) DA(d232):DT(c108) DG(d233):DC(c107) DT(d234):DA(c106) DG(d235):DC(c105) DG(d236):DC(c104) DC(d237):DG(c103) DG(d238):DC(c102) DG(d239):DC(c101) DT(d240):DA(c100) DT(d241):DA(c99) DA(d242):DT(c98) DA(d243):DT(c97) DA(d244):DT(c96) DA(d245):DT(c95) DC(d246):DG(c94) DG(d247):DC(c93) DC(d248):DG(c92) DG(d249):DC(c91) DG(d250):DC(c90) DT(d251):DA(c89) DA(d252):DT(c88) DG(d253):DC(c87) DA(d254):DT(c86) DC(d255):DG(c85) DA(d256):DT(c84) DG(d257):DC(c83) DC(d258):DG(c82) DG(d259):DC(c81) DC(d260):DG(c80) DG(d261):DC(c79) DT(d262):DA(c78) DA(d263):DT(c77) DC(d264):DG(c76) DG(d265):DC(c75) DT(d266):DA(c74) DG(d267):DC(c73) DC(d268):DG(c72) DG(d269):DC(c71) DT(d270):DA(c70) DT(d271):DA(c69) DT(d272):DA(c68) DA(d273):DT(c67) DA(d274):DT(c66) DG(d275):DC(c65) DC(d276):DG(c64) DG(d277):DC(c63) DG(d278):DC(c62) DT(d279):DA(c61) DG(d280):DC(c60) DC(d281):DG(c59) DT(d282):DA(c58) DA(d283):DT(c57) DG(d284):DC(c56) DA(d285):DT(c55) DG(d286):DC(c54) DC(d287):DG(c53) DT(d288):DA(c52) DG(d289):DC(c51) DT(d290):DA(c50) DC(d291):DG(c49) DT(d292):DA(c48) DA(d293):DT(c47) DC(d294):DG(c46) DG(d295):DC(c45) DA(d296):DT(c44) DC(d297):DG(c43) DC(d298):DG(c42) DA(d299):DT(c41) DT(d301):DT(c40) DT(d302):DA(c38) DG(d303):DC(c37) DA(d304):DT(c36) DG(d305):DC(c35) DC(d306):DG(c34) DG(d307):DC(c33) DG(d308):DC(c32) DC(d309):DG(c31) DC(d310):DG(c30) DT(d311):DA(c29) DC(d312):DG(c28) DG(d313):DC(c27) DG(d314):DC(c26) DC(d315):DG(c25) DA(d316):DT(c24) DC(d317):DG(c23) DC(d318):DG(c22) DG(d319):DC(c21) DG(d320):DC(c20) DG(d321):DC(c19) DA(d322):DT(c18) DT(d323):DA(c17) DG(d324):DC(c16) DC(d325):DG(c15) DG(d326):DC(c14) DT(d327):DA(c13) DT(d328):DA(c12) DT(d329):DA(c11) DT(d330):DA(c10) DT(d331):DA(c9) DT(d332):DA(c8) DT(d333):DA(c7) DT(d334):DA(c6) DC(d335):DG(c5) DA(d336):DT(c4) DG(d337):DC(c3) DC(d338):DG(c2) DG(d339):DC(c1) chaing ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk >6la8_R:Histone-fold; title=349 BP DI-NUCLEOSOME HARBORING COHESIVE DNA TERMINI ASSEMBLED WITH LINKER HISTONE H1.0 organism=? DNA sequence DC(I1):DG(J345) DG(I2):DC(J344) DC(I3):DG(J343) DT(I4):DA(J342) DG(I5):DC(J341) DG(I6):DC(J340) DA(I7):DT(J339) DA(I8):DT(J338) DA(I9):DT(J337) DA(I10):DT(J336) DA(I11):DT(J335) DA(I12):DT(J334) DA(I13):DT(J333) DA(I14):DT(J332) DA(I15):DT(J331) DA(I16):DT(J330) DC(I17):DG(J329) DG(I18):DC(J328) DC(I19):DG(J327) DA(I20):DT(J326) DT(I21):DA(J325) DC(I22):DG(J324) DC(I23):DG(J323) DC(I24):DG(J322) DG(I25):DC(J321) DG(I26):DC(J320) DT(I27):DA(J319) DG(I28):DC(J318) DC(I29):DG(J317) DC(I30):DG(J316) DG(I31):DC(J315) DA(I32):DT(J314) DG(I33):DC(J313) DG(I34):DC(J312) DC(I35):DG(J311) DC(I36):DG(J310) DG(I37):DC(J309) DC(I38):DG(J308) DT(I39):DA(J307) DC(I40):DG(J306) DA(I41):DT(J305) DA(I42):DT(J304) DT(I43):DA(J303) DT(I44):DA(J302) DG(I45):DC(J301) DG(I46):DC(J300) DT(I47):DA(J299) DC(I48):DG(J298) DG(I49):DC(J297) DT(I50):DA(J296) DA(I51):DT(J295) DG(I52):DC(J294) DA(I53):DT(J293) DC(I54):DG(J292) DA(I55):DT(J291) DG(I56):DC(J290) DC(I57):DG(J289) DT(I58):DA(J288) DC(I59):DG(J287) DT(I60):DA(J286) DA(I61):DT(J285) DG(I62):DC(J284) DC(I63):DG(J283) DA(I64):DT(J282) DC(I65):DG(J281) DC(I66):DG(J280) DG(I67):DC(J279) DC(I68):DG(J278) DT(I69):DA(J277) DT(I70):DA(J276) DA(I71):DT(J275) DA(I72):DT(J274) DA(I73):DT(J273) DC(I74):DG(J272) DG(I75):DC(J271) DC(I76):DG(J270) DA(I77):DT(J269) DC(I78):DG(J268) DG(I79):DC(J267) DT(I80):DA(J266) DA(I81):DT(J265) DC(I82):DG(J264) DG(I83):DC(J263) DC(I84):DG(J262) DG(I85):DC(J261) DC(I86):DG(J260) DT(I87):DA(J259) DG(I88):DC(J258) DT(I89):DA(J257) DC(I90):DG(J256) DT(I91):DA(J255) DA(I92):DT(J254) DC(I93):DG(J253) DC(I94):DG(J252) DG(I95):DC(J251) DC(I96):DG(J250) DG(I97):DC(J249) DT(I98):DA(J248) DT(I99):DA(J247) DT(I100):DA(J246) DT(I101):DA(J245) DA(I102):DT(J244) DA(I103):DT(J243) DC(I104):DG(J242) DC(I105):DG(J241) DG(I106):DC(J240) DC(I107):DG(J239) DC(I108):DG(J238) DA(I109):DT(J237) DC(I110):DG(J236) DT(I111):DA(J235) DA(I112):DT(J234) DG(I113):DC(J233) DA(I114):DT(J232) DA(I115):DT(J231) DG(I116):DC(J230) DC(I117):DG(J229) DG(I118):DC(J228) DC(I119):DG(J227) DT(I120):DA(J226) DT(I121):DA(J225) DA(I122):DT(J224) DC(I123):DG(J223) DT(I124):DA(J222) DA(I125):DT(J221) DG(I126):DC(J220) DT(I127):DA(J219) DC(I128):DG(J218) DT(I129):DA(J217) DC(I130):DG(J216) DC(I131):DG(J215) DA(I132):DT(J214) DG(I133):DC(J213) DG(I134):DC(J212) DC(I135):DG(J211) DA(I136):DT(J210) DC(I137):DG(J209) DG(I138):DC(J208) DT(I139):DA(J207) DG(I140):DC(J206) DT(I141):DA(J205) DG(I142):DC(J204) DA(I143):DT(J203) DG(I144):DC(J202) DA(I145):DT(J201) DC(I146):DG(J200) DC(I147):DG(J199) DG(I148):DC(J198) DG(I149):DC(J197) DC(I150):DG(J196) DA(I151):DT(J195) DC(I152):DG(J194) DA(I153):DT(J193) DT(I154):DA(J192) DG(I155):DC(J191) DA(I156):DT(J190) DA(I157):DT(J189) DA(I158):DT(J188) DA(I159):DT(J187) DA(I160):DT(J186) DA(I161):DT(J185) DA(I162):DT(J184) DA(I163):DT(J183) DA(I164):DT(J182) DA(I165):DT(J181) DG(I166):DC(J180) DC(I167):DG(J179) DA(I168):DT(J178) DT(I169):DA(J177) DG(I170):DC(J176) DC(I171):DG(J175) DT(I172):DA(J174) DC(I173):DG(J173) DG(I174):DC(J172) DA(I175):DT(J171) DG(I176):DC(J170) DT(I177):DA(J169) DA(I178):DT(J168) DT(I179):DA(J167) DG(I180):DC(J166) DA(I181):DT(J165) DA(I182):DT(J164) DA(I183):DT(J163) DA(I184):DT(J162) DA(I185):DT(J161) DA(I186):DT(J160) DA(I187):DT(J159) DA(I188):DT(J158) DA(I189):DT(J157) DA(I190):DT(J156) DC(I191):DG(J155) DG(I192):DC(J154) DC(I193):DG(J153) DA(I194):DT(J152) DT(I195):DA(J151) DC(I196):DG(J150) DC(I197):DG(J149) DC(I198):DG(J148) DG(I199):DC(J147) DG(I200):DC(J146) DT(I201):DA(J145) DG(I202):DC(J144) DC(I203):DG(J143) DC(I204):DG(J142) DG(I205):DC(J141) DA(I206):DT(J140) DG(I207):DC(J139) DG(I208):DC(J138) DC(I209):DG(J137) DC(I210):DG(J136) DG(I211):DC(J135) DC(I212):DG(J134) DT(I213):DA(J133) DC(I214):DG(J132) DA(I215):DT(J131) DA(I216):DT(J130) DT(I217):DA(J129) DT(I218):DA(J128) DG(I219):DC(J127) DG(I220):DC(J126) DT(I221):DA(J125) DC(I222):DG(J124) DG(I223):DC(J123) DT(I224):DA(J122) DA(I225):DT(J121) DG(I226):DC(J120) DA(I227):DT(J119) DC(I228):DG(J118) DA(I229):DT(J117) DG(I230):DC(J116) DC(I231):DG(J115) DT(I232):DA(J114) DC(I233):DG(J113) DT(I234):DA(J112) DA(I235):DT(J111) DG(I236):DC(J110) DC(I237):DG(J109) DA(I238):DT(J108) DC(I239):DG(J107) DC(I240):DG(J106) DG(I241):DC(J105) DC(I242):DG(J104) DT(I243):DA(J103) DT(I244):DA(J102) DA(I245):DT(J101) DA(I246):DT(J100) DA(I247):DT(J99) DC(I248):DG(J98) DG(I249):DC(J97) DC(I250):DG(J96) DA(I251):DT(J95) DC(I252):DG(J94) DG(I253):DC(J93) DT(I254):DA(J92) DA(I255):DT(J91) DC(I256):DG(J90) DG(I257):DC(J89) DC(I258):DG(J88) DG(I259):DC(J87) DC(I260):DG(J86) DT(I261):DA(J85) DG(I262):DC(J84) DT(I263):DA(J83) DC(I264):DG(J82) DT(I265):DA(J81) DA(I266):DT(J80) DC(I267):DG(J79) DC(I268):DG(J78) DG(I269):DC(J77) DC(I270):DG(J76) DG(I271):DC(J75) DT(I272):DA(J74) DT(I273):DA(J73) DT(I274):DA(J72) DT(I275):DA(J71) DA(I276):DT(J70) DA(I277):DT(J69) DC(I278):DG(J68) DC(I279):DG(J67) DG(I280):DC(J66) DC(I281):DG(J65) DC(I282):DG(J64) DA(I283):DT(J63) DC(I284):DG(J62) DT(I285):DA(J61) DA(I286):DT(J60) DG(I287):DC(J59) DA(I288):DT(J58) DA(I289):DT(J57) DG(I290):DC(J56) DC(I291):DG(J55) DG(I292):DC(J54) DC(I293):DG(J53) DT(I294):DA(J52) DT(I295):DA(J51) DA(I296):DT(J50) DC(I297):DG(J49) DT(I298):DA(J48) DA(I299):DT(J47) DG(I300):DC(J46) DT(I301):DA(J45) DC(I302):DG(J44) DT(I303):DA(J43) DC(I304):DG(J42) DC(I305):DG(J41) DA(I306):DT(J40) DG(I307):DC(J39) DG(I308):DC(J38) DC(I309):DG(J37) DA(I310):DT(J36) DC(I311):DG(J35) DG(I312):DC(J34) DT(I313):DA(J33) DG(I314):DC(J32) DT(I315):DA(J31) DG(I316):DC(J30) DA(I317):DT(J29) DG(I318):DC(J28) DA(I319):DT(J27) DC(I320):DG(J26) DC(I321):DG(J25) DG(I322):DC(J24) DG(I323):DC(J23) DC(I324):DG(J22) DA(I325):DT(J21) DC(I326):DG(J20) DA(I327):DT(J19) DT(I328):DA(J18) DG(I329):DC(J17) DA(I330):DT(J16) DA(I331):DT(J15) DA(I332):DT(J14) DA(I333):DT(J13) DA(I334):DT(J12) DA(I335):DT(J11) DA(I336):DT(J10) DA(I337):DT(J9) DA(I338):DT(J8) DA(I339):DT(J7) DC(I340):DG(J6) DC(I341):DG(J5) DA(I342):DT(J4) DG(I343):DC(J3) DC(I344):DG(J2) DG(I345):DC(J1) chainR ( 1) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Krsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6la9_A:Histone-fold; title=349 BP DI-NUCLEOSOME HARBORING COHESIVE DNA TERMINI ASSEMBLED WITH LINKER HISTONE H1.0 (HIGH CRYOPROTECTANT) organism=? DNA sequence DC(J1):DG(I345) DG(J2):DC(I344) DC(J3):DG(I343) DT(J4):DA(I342) DG(J5):DC(I341) DG(J6):DC(I340) DT(J7):DA(I339) DT(J8):DA(I338) DT(J9):DA(I337) DT(J10):DA(I336) DT(J11):DA(I335) DT(J12):DA(I334) DT(J13):DA(I333) DT(J14):DA(I332) DT(J15):DA(I331) DT(J16):DA(I330) DC(J17):DG(I329) DA(J18):DT(I328) DT(J19):DA(I327) DG(J20):DC(I326) DT(J21):DA(I325) DG(J22):DC(I324) DC(J23):DG(I323) DC(J24):DG(I322) DG(J25):DC(I321) DG(J26):DC(I320) DT(J27):DA(I319) DC(J28):DG(I318) DT(J29):DA(I317) DC(J30):DG(I316) DA(J31):DT(I315) DC(J32):DG(I314) DA(J33):DT(I313) DC(J34):DG(I312) DG(J35):DC(I311) DT(J36):DA(I310) DG(J37):DC(I309) DC(J38):DG(I308) DC(J39):DG(I307) DT(J40):DA(I306) DG(J41):DC(I305) DG(J42):DC(I304) DA(J43):DT(I303) DG(J44):DC(I302) DA(J45):DT(I301) DC(J46):DG(I300) DT(J47):DA(I299) DA(J48):DT(I298) DG(J49):DC(I297) DT(J50):DA(I296) DA(J51):DT(I295) DA(J52):DT(I294) DG(J53):DC(I293) DC(J54):DG(I292) DG(J55):DC(I291) DC(J56):DG(I290) DT(J57):DA(I289) DT(J58):DA(I288) DC(J59):DG(I287) DT(J60):DA(I286) DA(J61):DT(I285) DG(J62):DC(I284) DT(J63):DA(I283) DG(J64):DC(I282) DG(J65):DC(I281) DC(J66):DG(I280) DG(J67):DC(I279) DG(J68):DC(I278) DT(J69):DA(I277) DT(J70):DA(I276) DA(J71):DT(I275) DA(J72):DT(I274) DA(J73):DT(I273) DA(J74):DT(I272) DC(J75):DG(I271) DG(J76):DC(I270) DC(J77):DG(I269) DG(J78):DC(I268) DG(J79):DC(I267) DT(J80):DA(I266) DA(J81):DT(I265) DG(J82):DC(I264) DA(J83):DT(I263) DC(J84):DG(I262) DA(J85):DT(I261) DG(J86):DC(I260) DC(J87):DG(I259) DG(J88):DC(I258) DC(J89):DG(I257) DG(J90):DC(I256) DT(J91):DA(I255) DA(J92):DT(I254) DC(J93):DG(I253) DG(J94):DC(I252) DT(J95):DA(I251) DG(J96):DC(I250) DC(J97):DG(I249) DG(J98):DC(I248) DT(J99):DA(I247) DT(J100):DA(I246) DT(J101):DA(I245) DA(J102):DT(I244) DA(J103):DT(I243) DG(J104):DC(I242) DC(J105):DG(I241) DG(J106):DC(I240) DG(J107):DC(I239) DT(J108):DA(I238) DG(J109):DC(I237) DC(J110):DG(I236) DT(J111):DA(I235) DA(J112):DT(I234) DG(J113):DC(I233) DA(J114):DT(I232) DG(J115):DC(I231) DC(J116):DG(I230) DT(J117):DA(I229) DG(J118):DC(I228) DT(J119):DA(I227) DC(J120):DG(I226) DT(J121):DA(I225) DA(J122):DT(I224) DC(J123):DG(I223) DG(J124):DC(I222) DA(J125):DT(I221) DC(J126):DG(I220) DC(J127):DG(I219) DA(J128):DT(I218) DA(J129):DT(I217) DT(J130):DA(I216) DT(J131):DA(I215) DG(J132):DC(I214) DA(J133):DT(I213) DG(J134):DC(I212) DC(J135):DG(I211) DG(J136):DC(I210) DG(J137):DC(I209) DC(J138):DG(I208) DC(J139):DG(I207) DT(J140):DA(I206) DC(J141):DG(I205) DG(J142):DC(I204) DG(J143):DC(I203) DC(J144):DG(I202) DA(J145):DT(I201) DC(J146):DG(I200) DC(J147):DG(I199) DG(J148):DC(I198) DG(J149):DC(I197) DG(J150):DC(I196) DA(J151):DT(I195) DT(J152):DA(I194) DG(J153):DC(I193) DC(J154):DG(I192) DG(J155):DC(I191) DT(J156):DA(I190) DT(J157):DA(I189) DT(J158):DA(I188) DT(J159):DA(I187) DT(J160):DA(I186) DT(J161):DA(I185) DT(J162):DA(I184) DT(J163):DA(I183) DT(J164):DA(I182) DT(J165):DA(I181) DC(J166):DG(I180) DA(J167):DT(I179) DT(J168):DA(I178) DA(J169):DT(I177) DC(J170):DG(I176) DT(J171):DA(I175) DC(J172):DG(I174) DG(J173):DC(I173) DA(J174):DT(I172) DG(J175):DC(I171) DC(J176):DG(I170) DA(J177):DT(I169) DT(J178):DA(I168) DG(J179):DC(I167) DC(J180):DG(I166) DT(J181):DA(I165) DT(J182):DA(I164) DT(J183):DA(I163) DT(J184):DA(I162) DT(J185):DA(I161) DT(J186):DA(I160) DT(J187):DA(I159) DT(J188):DA(I158) DT(J189):DA(I157) DT(J190):DA(I156) DC(J191):DG(I155) DA(J192):DT(I154) DT(J193):DA(I153) DG(J194):DC(I152) DT(J195):DA(I151) DG(J196):DC(I150) DC(J197):DG(I149) DC(J198):DG(I148) DG(J199):DC(I147) DG(J200):DC(I146) DT(J201):DA(I145) DC(J202):DG(I144) DT(J203):DA(I143) DC(J204):DG(I142) DA(J205):DT(I141) DC(J206):DG(I140) DA(J207):DT(I139) DC(J208):DG(I138) DG(J209):DC(I137) DT(J210):DA(I136) DG(J211):DC(I135) DC(J212):DG(I134) DC(J213):DG(I133) DT(J214):DA(I132) DG(J215):DC(I131) DG(J216):DC(I130) DA(J217):DT(I129) DG(J218):DC(I128) DA(J219):DT(I127) DC(J220):DG(I126) DT(J221):DA(I125) DA(J222):DT(I124) DG(J223):DC(I123) DT(J224):DA(I122) DA(J225):DT(I121) DA(J226):DT(I120) DG(J227):DC(I119) DC(J228):DG(I118) DG(J229):DC(I117) DC(J230):DG(I116) DT(J231):DA(I115) DT(J232):DA(I114) DC(J233):DG(I113) DT(J234):DA(I112) DA(J235):DT(I111) DG(J236):DC(I110) DT(J237):DA(I109) DG(J238):DC(I108) DG(J239):DC(I107) DC(J240):DG(I106) DG(J241):DC(I105) DG(J242):DC(I104) DT(J243):DA(I103) DT(J244):DA(I102) DA(J245):DT(I101) DA(J246):DT(I100) DA(J247):DT(I99) DA(J248):DT(I98) DC(J249):DG(I97) DG(J250):DC(I96) DC(J251):DG(I95) DG(J252):DC(I94) DG(J253):DC(I93) DT(J254):DA(I92) DA(J255):DT(I91) DG(J256):DC(I90) DA(J257):DT(I89) DC(J258):DG(I88) DA(J259):DT(I87) DG(J260):DC(I86) DC(J261):DG(I85) DG(J262):DC(I84) DC(J263):DG(I83) DG(J264):DC(I82) DT(J265):DA(I81) DA(J266):DT(I80) DC(J267):DG(I79) DG(J268):DC(I78) DT(J269):DA(I77) DG(J270):DC(I76) DC(J271):DG(I75) DG(J272):DC(I74) DT(J273):DA(I73) DT(J274):DA(I72) DT(J275):DA(I71) DA(J276):DT(I70) DA(J277):DT(I69) DG(J278):DC(I68) DC(J279):DG(I67) DG(J280):DC(I66) DG(J281):DC(I65) DT(J282):DA(I64) DG(J283):DC(I63) DC(J284):DG(I62) DT(J285):DA(I61) DA(J286):DT(I60) DG(J287):DC(I59) DA(J288):DT(I58) DG(J289):DC(I57) DC(J290):DG(I56) DT(J291):DA(I55) DG(J292):DC(I54) DT(J293):DA(I53) DC(J294):DG(I52) DT(J295):DA(I51) DA(J296):DT(I50) DC(J297):DG(I49) DG(J298):DC(I48) DA(J299):DT(I47) DC(J300):DG(I46) DC(J301):DG(I45) DA(J302):DT(I44) DA(J303):DT(I43) DT(J304):DA(I42) DT(J305):DA(I41) DG(J306):DC(I40) DA(J307):DT(I39) DG(J308):DC(I38) DC(J309):DG(I37) DG(J310):DC(I36) DG(J311):DC(I35) DC(J312):DG(I34) DC(J313):DG(I33) DT(J314):DA(I32) DC(J315):DG(I31) DG(J316):DC(I30) DG(J317):DC(I29) DC(J318):DG(I28) DA(J319):DT(I27) DC(J320):DG(I26) DC(J321):DG(I25) DG(J322):DC(I24) DG(J323):DC(I23) DG(J324):DC(I22) DA(J325):DT(I21) DT(J326):DA(I20) DG(J327):DC(I19) DC(J328):DG(I18) DG(J329):DC(I17) DT(J330):DA(I16) DT(J331):DA(I15) DT(J332):DA(I14) DT(J333):DA(I13) DT(J334):DA(I12) DT(J335):DA(I11) DT(J336):DA(I10) DT(J337):DA(I9) DT(J338):DA(I8) DT(J339):DA(I7) DC(J340):DG(I6) DC(J341):DG(I5) DA(J342):DT(I4) DG(J343):DC(I3) DC(J344):DG(I2) DG(J345):DC(I1) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >6lab_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=169 BP NUCLEOSOME, HARBORING COHESIVE DNA TERMINI, ASSEMBLED WITH LINKER HISTONE H1.0 organism=HOMO SAPIENS DNA sequence DG(J-82):DC(I82) DC(J-81):DG(I81) DT(J-80):DA(I80) DT(J-79):DA(I79) DT(J-78):DA(I78) DT(J-77):DA(I77) DT(J-76):DA(I76) DT(J-75):DA(I75) DT(J-74):DA(I74) DT(J-73):DA(I73) DT(J-72):DA(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DG(J68):DC(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DA(J72):DT(I-72) DA(J73):DT(I-73) DA(J74):DT(I-74) DA(J75):DT(I-75) DA(J76):DT(I-76) DA(J77):DT(I-77) DA(J78):DT(I-78) DA(J79):DT(I-79) DA(J80):DT(I-80) DG(J81):DC(I-81) DC(J82):DG(I-82) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG42 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 18) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRyRPgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysiyvykvlkqvhpdtgisskAmgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstelliRklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/hrkvlrdniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrLlrkgnyserVgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysiyvykvlkQvhpdtgissKamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6lab_KLMNOPQR:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=169 BP NUCLEOSOME, HARBORING COHESIVE DNA TERMINI, ASSEMBLED WITH LINKER HISTONE H1.0 organism=HOMO SAPIENS DNA sequence DG(T-82):DC(S82) DC(T-81):DG(S81) DT(T-80):DA(S80) DT(T-79):DA(S79) DT(T-78):DA(S78) DT(T-77):DA(S77) DT(T-76):DA(S76) DT(T-75):DA(S75) DT(T-74):DA(S74) DT(T-73):DA(S73) DT(T-72):DA(S72) DT(T-71):DA(S71) DC(T-70):DG(S70) DA(T-69):DT(S69) DC(T-68):DG(S68) DA(T-67):DT(S67) DA(T-66):DT(S66) DT(T-65):DA(S65) DC(T-64):DG(S64) DC(T-63):DG(S63) DC(T-62):DG(S62) DG(T-61):DC(S61) DG(T-60):DC(S60) DT(T-59):DA(S59) DG(T-58):DC(S58) DC(T-57):DG(S57) DC(T-56):DG(S56) DG(T-55):DC(S55) DA(T-54):DT(S54) DG(T-53):DC(S53) DG(T-52):DC(S52) DC(T-51):DG(S51) DC(T-50):DG(S50) DG(T-49):DC(S49) DC(T-48):DG(S48) DT(T-47):DA(S47) DC(T-46):DG(S46) DA(T-45):DT(S45) DA(T-44):DT(S44) DT(T-43):DA(S43) DT(T-42):DA(S42) DG(T-41):DC(S41) DG(T-40):DC(S40) DT(T-39):DA(S39) DC(T-38):DG(S38) DG(T-37):DC(S37) DT(T-36):DA(S36) DA(T-35):DT(S35) DG(T-34):DC(S34) DA(T-33):DT(S33) DC(T-32):DG(S32) DA(T-31):DT(S31) DG(T-30):DC(S30) DC(T-29):DG(S29) DT(T-28):DA(S28) DC(T-27):DG(S27) DT(T-26):DA(S26) DA(T-25):DT(S25) DG(T-24):DC(S24) DC(T-23):DG(S23) DA(T-22):DT(S22) DC(T-21):DG(S21) DC(T-20):DG(S20) DG(T-19):DC(S19) DC(T-18):DG(S18) DT(T-17):DA(S17) DT(T-16):DA(S16) DA(T-15):DT(S15) DA(T-14):DT(S14) DA(T-13):DT(S13) DC(T-12):DG(S12) DG(T-11):DC(S11) DC(T-10):DG(S10) DA(T-9):DT(S9) DC(T-8):DG(S8) DG(T-7):DC(S7) DT(T-6):DA(S6) DA(T-5):DT(S5) DC(T-4):DG(S4) DG(T-3):DC(S3) DG(T-2):DC(S2) DA(T-1):DT(S1) DT(T0):DA(S0) DT(T1):DA(S-1) DC(T2):DG(S-2) DC(T3):DG(S-3) DG(T4):DC(S-4) DT(T5):DA(S-5) DA(T6):DT(S-6) DC(T7):DG(S-7) DG(T8):DC(S-8) DT(T9):DA(S-9) DG(T10):DC(S-10) DC(T11):DG(S-11) DG(T12):DC(S-12) DT(T13):DA(S-13) DT(T14):DA(S-14) DT(T15):DA(S-15) DA(T16):DT(S-16) DA(T17):DT(S-17) DG(T18):DC(S-18) DC(T19):DG(S-19) DG(T20):DC(S-20) DG(T21):DC(S-21) DT(T22):DA(S-22) DG(T23):DC(S-23) DC(T24):DG(S-24) DT(T25):DA(S-25) DA(T26):DT(S-26) DG(T27):DC(S-27) DA(T28):DT(S-28) DG(T29):DC(S-29) DC(T30):DG(S-30) DT(T31):DA(S-31) DG(T32):DC(S-32) DT(T33):DA(S-33) DC(T34):DG(S-34) DT(T35):DA(S-35) DA(T36):DT(S-36) DC(T37):DG(S-37) DG(T38):DC(S-38) DA(T39):DT(S-39) DC(T40):DG(S-40) DC(T41):DG(S-41) DA(T42):DT(S-42) DA(T43):DT(S-43) DT(T44):DA(S-44) DT(T45):DA(S-45) DG(T46):DC(S-46) DA(T47):DT(S-47) DG(T48):DC(S-48) DC(T49):DG(S-49) DG(T50):DC(S-50) DG(T51):DC(S-51) DC(T52):DG(S-52) DC(T53):DG(S-53) DT(T54):DA(S-54) DC(T55):DG(S-55) DG(T56):DC(S-56) DG(T57):DC(S-57) DC(T58):DG(S-58) DA(T59):DT(S-59) DC(T60):DG(S-60) DC(T61):DG(S-61) DG(T62):DC(S-62) DG(T63):DC(S-63) DG(T64):DC(S-64) DA(T65):DT(S-65) DT(T66):DA(S-66) DT(T67):DA(S-67) DG(T68):DC(S-68) DT(T69):DA(S-69) DG(T70):DC(S-70) DA(T71):DT(S-71) DA(T72):DT(S-72) DA(T73):DT(S-73) DA(T74):DT(S-74) DA(T75):DT(S-75) DA(T76):DT(S-76) DA(T77):DT(S-77) DA(T78):DT(S-78) DA(T79):DT(S-79) DA(T80):DT(S-80) DG(T81):DC(S-81) DC(T82):DG(S-82) chainK ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainO ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP chainQ ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR prot.sequence phRyrPgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rhRkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysiyvykvlkqvhpdtgisSkamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6lab_M:Histone-fold; title=169 BP NUCLEOSOME, HARBORING COHESIVE DNA TERMINI, ASSEMBLED WITH LINKER HISTONE H1.0 organism=HOMO SAPIENS DNA sequence DG(T-82):DC(S82) DC(T-81):DG(S81) DT(T-80):DA(S80) DT(T-79):DA(S79) DT(T-78):DA(S78) DT(T-77):DA(S77) DT(T-76):DA(S76) DT(T-75):DA(S75) DT(T-74):DA(S74) DT(T-73):DA(S73) DT(T-72):DA(S72) DT(T-71):DA(S71) DC(T-70):DG(S70) DA(T-69):DT(S69) DC(T-68):DG(S68) DA(T-67):DT(S67) DA(T-66):DT(S66) DT(T-65):DA(S65) DC(T-64):DG(S64) DC(T-63):DG(S63) DC(T-62):DG(S62) DG(T-61):DC(S61) DG(T-60):DC(S60) DT(T-59):DA(S59) DG(T-58):DC(S58) DC(T-57):DG(S57) DC(T-56):DG(S56) DG(T-55):DC(S55) DA(T-54):DT(S54) DG(T-53):DC(S53) DG(T-52):DC(S52) DC(T-51):DG(S51) DC(T-50):DG(S50) DG(T-49):DC(S49) DC(T-48):DG(S48) DT(T-47):DA(S47) DC(T-46):DG(S46) DA(T-45):DT(S45) DA(T-44):DT(S44) DT(T-43):DA(S43) DT(T-42):DA(S42) DG(T-41):DC(S41) DG(T-40):DC(S40) DT(T-39):DA(S39) DC(T-38):DG(S38) DG(T-37):DC(S37) DT(T-36):DA(S36) DA(T-35):DT(S35) DG(T-34):DC(S34) DA(T-33):DT(S33) DC(T-32):DG(S32) DA(T-31):DT(S31) DG(T-30):DC(S30) DC(T-29):DG(S29) DT(T-28):DA(S28) DC(T-27):DG(S27) DT(T-26):DA(S26) DA(T-25):DT(S25) DG(T-24):DC(S24) DC(T-23):DG(S23) DA(T-22):DT(S22) DC(T-21):DG(S21) DC(T-20):DG(S20) DG(T-19):DC(S19) DC(T-18):DG(S18) DT(T-17):DA(S17) DT(T-16):DA(S16) DA(T-15):DT(S15) DA(T-14):DT(S14) DA(T-13):DT(S13) DC(T-12):DG(S12) DG(T-11):DC(S11) DC(T-10):DG(S10) DA(T-9):DT(S9) DC(T-8):DG(S8) DG(T-7):DC(S7) DT(T-6):DA(S6) DA(T-5):DT(S5) DC(T-4):DG(S4) DG(T-3):DC(S3) DG(T-2):DC(S2) DA(T-1):DT(S1) DT(T0):DA(S0) DT(T1):DA(S-1) DC(T2):DG(S-2) DC(T3):DG(S-3) DG(T4):DC(S-4) DT(T5):DA(S-5) DA(T6):DT(S-6) DC(T7):DG(S-7) DG(T8):DC(S-8) DT(T9):DA(S-9) DG(T10):DC(S-10) DC(T11):DG(S-11) DG(T12):DC(S-12) DT(T13):DA(S-13) DT(T14):DA(S-14) DT(T15):DA(S-15) DA(T16):DT(S-16) DA(T17):DT(S-17) DG(T18):DC(S-18) DC(T19):DG(S-19) DG(T20):DC(S-20) DG(T21):DC(S-21) DT(T22):DA(S-22) DG(T23):DC(S-23) DC(T24):DG(S-24) DT(T25):DA(S-25) DA(T26):DT(S-26) DG(T27):DC(S-27) DA(T28):DT(S-28) DG(T29):DC(S-29) DC(T30):DG(S-30) DT(T31):DA(S-31) DG(T32):DC(S-32) DT(T33):DA(S-33) DC(T34):DG(S-34) DT(T35):DA(S-35) DA(T36):DT(S-36) DC(T37):DG(S-37) DG(T38):DC(S-38) DA(T39):DT(S-39) DC(T40):DG(S-40) DC(T41):DG(S-41) DA(T42):DT(S-42) DA(T43):DT(S-43) DT(T44):DA(S-44) DT(T45):DA(S-45) DG(T46):DC(S-46) DA(T47):DT(S-47) DG(T48):DC(S-48) DC(T49):DG(S-49) DG(T50):DC(S-50) DG(T51):DC(S-51) DC(T52):DG(S-52) DC(T53):DG(S-53) DT(T54):DA(S-54) DC(T55):DG(S-55) DG(T56):DC(S-56) DG(T57):DC(S-57) DC(T58):DG(S-58) DA(T59):DT(S-59) DC(T60):DG(S-60) DC(T61):DG(S-61) DG(T62):DC(S-62) DG(T63):DC(S-63) DG(T64):DC(S-64) DA(T65):DT(S-65) DT(T66):DA(S-66) DT(T67):DA(S-67) DG(T68):DC(S-68) DT(T69):DA(S-69) DG(T70):DC(S-70) DA(T71):DT(S-71) DA(T72):DT(S-72) DA(T73):DT(S-73) DA(T74):DT(S-74) DA(T75):DT(S-75) DA(T76):DT(S-76) DA(T77):DT(S-77) DA(T78):DT(S-78) DA(T79):DT(S-79) DA(T80):DT(S-80) DG(T81):DC(S-81) DC(T82):DG(S-82) chainM ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >6lab_UV:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=169 BP NUCLEOSOME, HARBORING COHESIVE DNA TERMINI, ASSEMBLED WITH LINKER HISTONE H1.0 organism=HOMO SAPIENS DNA sequence DT(i335):DA(j169) DG(i336):DC(j168) DC(i337):DG(j167) DA(i338):DT(j166) DG(i339):DC(j165) DC(i340):DG(j164) DT(i341):DA(j163) DT(i342):DA(j162) DT(i343):DA(j161) DT(i344):DA(j160) DT(i345):DA(j159) DT(i346):DA(j158) DT(i347):DA(j157) DT(i348):DA(j156) DT(i349):DA(j155) DT(i350):DA(j154) DC(i351):DG(j153) DA(i352):DT(j152) DC(i353):DG(j151) DA(i354):DT(j150) DA(i355):DT(j149) DT(i356):DA(j148) DC(i357):DG(j147) DC(i358):DG(j146) DC(i359):DG(j145) DG(i360):DC(j144) DG(i361):DC(j143) DT(i362):DA(j142) DG(i363):DC(j141) DC(i364):DG(j140) DC(i365):DG(j139) DG(i366):DC(j138) DA(i367):DT(j137) DG(i368):DC(j136) DG(i369):DC(j135) DC(i370):DG(j134) DC(i371):DG(j133) DG(i372):DC(j132) DC(i373):DG(j131) DT(i374):DA(j130) DC(i375):DG(j129) DA(i376):DT(j128) DA(i377):DT(j127) DT(i378):DA(j126) DT(i379):DA(j125) DG(i380):DC(j124) DG(i381):DC(j123) DT(i382):DA(j122) DC(i383):DG(j121) DG(i384):DC(j120) DT(i385):DA(j119) DA(i386):DT(j118) DG(i387):DC(j117) DA(i388):DT(j116) DC(i389):DG(j115) DA(i390):DT(j114) DG(i391):DC(j113) DC(i392):DG(j112) DT(i393):DA(j111) DC(i394):DG(j110) DT(i395):DA(j109) DA(i396):DT(j108) DG(i397):DC(j107) DC(i398):DG(j106) DA(i399):DT(j105) DC(i400):DG(j104) DC(i401):DG(j103) DG(i402):DC(j102) DC(i403):DG(j101) DT(i404):DA(j100) DT(i405):DA(j99) DA(i406):DT(j98) DA(i407):DT(j97) DA(i408):DT(j96) DC(i409):DG(j95) DG(i410):DC(j94) DC(i411):DG(j93) DA(i412):DT(j92) DC(i413):DG(j91) DG(i414):DC(j90) DT(i415):DA(j89) DA(i416):DT(j88) DC(i417):DG(j87) DG(i418):DC(j86) DG(i419):DC(j85) DA(i420):DT(j84) DA(i421):DT(j83) DT(i422):DA(j82) DC(i423):DG(j81) DC(i424):DG(j80) DG(i425):DC(j79) DT(i426):DA(j78) DA(i427):DT(j77) DC(i428):DG(j76) DG(i429):DC(j75) DT(i430):DA(j74) DG(i431):DC(j73) DC(i432):DG(j72) DG(i433):DC(j71) DT(i434):DA(j70) DT(i435):DA(j69) DT(i436):DA(j68) DA(i437):DT(j67) DA(i438):DT(j66) DG(i439):DC(j65) DC(i440):DG(j64) DG(i441):DC(j63) DG(i442):DC(j62) DT(i443):DA(j61) DG(i444):DC(j60) DC(i445):DG(j59) DT(i446):DA(j58) DA(i447):DT(j57) DG(i448):DC(j56) DA(i449):DT(j55) DG(i450):DC(j54) DC(i451):DG(j53) DT(i452):DA(j52) DG(i453):DC(j51) DT(i454):DA(j50) DC(i455):DG(j49) DT(i456):DA(j48) DA(i457):DT(j47) DC(i458):DG(j46) DG(i459):DC(j45) DA(i460):DT(j44) DC(i461):DG(j43) DC(i462):DG(j42) DA(i463):DT(j41) DA(i464):DT(j40) DT(i465):DA(j39) DT(i466):DA(j38) DG(i467):DC(j37) DA(i468):DT(j36) DG(i469):DC(j35) DC(i470):DG(j34) DG(i471):DC(j33) DG(i472):DC(j32) DC(i473):DG(j31) DC(i474):DG(j30) DT(i475):DA(j29) DC(i476):DG(j28) DG(i477):DC(j27) DG(i478):DC(j26) DC(i479):DG(j25) DA(i480):DT(j24) DC(i481):DG(j23) DC(i482):DG(j22) DG(i483):DC(j21) DG(i484):DC(j20) DG(i485):DC(j19) DA(i486):DT(j18) DT(i487):DA(j17) DT(i488):DA(j16) DG(i489):DC(j15) DT(i490):DA(j14) DG(i491):DC(j13) DA(i492):DT(j12) DA(i493):DT(j11) DA(i494):DT(j10) DA(i495):DT(j9) DA(i496):DT(j8) DA(i497):DT(j7) DA(i498):DT(j6) DA(i499):DT(j5) DA(i500):DT(j4) DA(i501):DT(j3) DG(i502):DC(j2) DC(i503):DG(j1) chainU ( 90) PRO101 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainV ( 29) LYS40 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpkrakaskkstdhpkysdmivaaiqaeknragssrqsiqkyikshykvgenadsqiklsikrlvttgvlkqtkgvgasgsfrlaksdePkksvafkktkkeik/kpkrakaskkstdhpkysdmivaaiqaeKnragssrqsiqkyikshykvgenadsqiklsikrlvttgvlkqtkgvgasgsfrlaksdepkksvafkktkkeikkvatp >6lae_A:Putative_DNA-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF HUMAN XPA IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(D2):DC(C10) DG(D3):DC(C9) DC(D4):DG(C8) DG(D5):DC(C7) DA(D6):DT(C6) DG(D7):DC(C5) DA(D8):DT(C4) DT(D9):DA(C3) DG(D10):DC(C2) DC(D11):DG(C1) chainA ( 42) THR142 0 2 0 0 0 0 0 0 0 0 ( 69) ASN169 3 0 0 0 0 0 0 0 0 0 ( 75) TRP175 64 0 0 0 0 0 0 0 0 0 prot.sequence dyviceecgkefmdsylmnhfdlptcdncrdaddkhklitkTeakqeyllkdcdlekrepplkfivkkNphhsqWgdmklylklqivkrslevwgsqealeeakevrqenrekmkq >6lae_AB:Putative_DNA-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF HUMAN XPA IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(C1):DC(D11) DC(C2):DG(D10) DA(C3):DT(D9) DT(C4):DA(D8) DC(C5):DG(D7) DT(C6):DA(D6) DC(C7):DG(D5) DG(C8):DC(D4) DC(C9):DG(D3) DC(C10):DG(D2) chainA ( 42) THR142 0 0 0 0 0 0 0 0 2 0 ( 69) ASN169 0 0 0 0 0 0 0 0 0 3 ( 75) TRP175 0 0 0 0 0 0 0 0 0 64 chainB ( 42) THR142 0 6 0 0 0 0 0 0 0 0 ( 75) TRP175 73 0 0 0 0 0 0 0 0 0 prot.sequence dyviceecgkefmdsylmnhfdlptcdncrdaddkhklitkTeakqeyllkdcdlekrepplkfivkkNphhsqWgdmklylklqivkrslevwgsqealeeakevrqenrekmkq/dyviceecgkefmdsylmnhfdlptcdncrdaddkhklitkTeakqeyllkdcdlekrepplkfivkknphhsqWgdmklylklqivkrslevwgsqealeeakevrqenrekmkq >6lb3_ABGH:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF PA4674 IN COMPLEX WITH ITS OPERATOR DNA (18BP) FROM PSEUDOMONAS AERUGINOSA organism=? DNA sequence DA(I1):DT(J18) DC(I2):DG(J17) DG(I3):DC(J16) DC(I4):DG(J15) DT(I5):DA(J14) DT(I6):DA(J13) DA(I7):DT(J12) DA(I8):DT(J11) DC(I9):DG(J10) DG(I10):DC(J9) DT(I11):DA(J8) DT(I12):DA(J7) DA(I13):DT(J6) DA(I14):DT(J5) DG(I15):DC(J4) DG(I16):DC(J3) DG(I17):DC(J2) DT(I18):DA(J1) chainA ( 43) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 chainB ( 33) SER37 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 ( 34) ALA38 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) PRO39 0 0 0 0 0 4 2 6 0 0 0 0 0 0 0 0 0 0 ( 38) ASN42 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG49 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 chainG ( 21) ALA28 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 30) SER37 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 31) ALA38 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 32) PRO39 0 0 0 0 0 0 0 0 0 0 6 2 5 0 0 0 0 0 ( 35) ASN42 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 42) ARG49 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 chainH ( 33) SER37 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) PRO39 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG49 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rpihpgeilrdeflmefdispaalaralkvsaptvndivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepl/gmrpihpgeilrdeflmefdispaalaralkvSAPTvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepl/pihpgeilrdeflmefdispAalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheie/gmrpihpgeilrdeflmefdispaalaralkvSaPtvndivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheieplla >6lb3_D:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF PA4674 IN COMPLEX WITH ITS OPERATOR DNA (18BP) FROM PSEUDOMONAS AERUGINOSA organism=? DNA sequence DA(K1):DT(L18) DC(K2):DG(L17) DG(K3):DC(L16) DC(K4):DG(L15) DT(K5):DA(L14) DT(K6):DA(L13) DA(K8):DT(L11) DC(K9):DG(L10) DG(K10):DC(L9) DT(K11):DA(L8) DT(K12):DA(L7) DA(K13):DT(L6) DA(K14):DT(L5) DG(K15):DC(L4) DG(K16):DC(L3) DG(K17):DC(L2) DT(K18):DA(L1) chainD ( 23) ALA28 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER37 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 ( 33) ALA38 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 34) PRO39 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 ( 37) ASN42 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 prot.sequence mrpihpgeilrdeflmefdispAalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepl >6lb3_DEF:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF PA4674 IN COMPLEX WITH ITS OPERATOR DNA (18BP) FROM PSEUDOMONAS AERUGINOSA organism=? DNA sequence DA(L1):DT(K18) DC(L2):DG(K17) DC(L3):DG(K16) DC(L4):DG(K15) DT(L5):DA(K14) DT(L6):DA(K13) DA(L7):DT(K12) DA(L8):DT(K11) DC(L9):DG(K10) DG(L10):DC(K9) DT(L11):DA(K8) DA(L13):DT(K6) DA(L14):DT(K5) DG(L15):DC(K4) DC(L16):DG(K3) DG(L17):DC(K2) DT(L18):DA(K1) chainD ( 23) ALA28 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 32) SER37 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 ( 33) ALA38 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 34) PRO39 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 ( 37) ASN42 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 chainE ( 32) SER37 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 33) ALA38 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 34) PRO39 0 0 0 0 0 3 2 6 0 0 0 0 0 0 0 0 0 ( 37) ASN42 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 chainF ( 44) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 prot.sequence mrpihpgeilrdeflmefdispAalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepl/mrpihpgeilrdeflmefdispaalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheie/mrpihpgeilrdeflmefdispaalaralkvsaptvndivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepll >6lbi_CD:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FOXO1-DBD HOMODIMER BOUND TO A PALINDROMIC DNA SEQUENCE organism=HOMO SAPIENS DNA sequence DA(B1):DT(A20) DC(B2):DG(A19) DC(B3):DG(A18) DG(B4):DC(A17) DT(B5):DA(A16) DA(B6):DT(A15) DA(B7):DT(A14) DA(B8):DT(A13) DC(B9):DG(A12) DA(B10):DT(A11) DT(B11):DA(A10) DG(B12):DC(A9) DT(B13):DA(A8) DT(B14):DA(A7) DT(B15):DA(A6) DA(B16):DT(A5) DC(B17):DG(A4) DG(B18):DC(A3) DG(B19):DC(A2) DT(B20):DA(A1) chainC ( 53) ASN211 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) SER212 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG214 0 0 0 0 0 0 0 1 2 9 0 0 0 0 0 0 0 0 0 0 ( 57) HIS215 0 0 0 0 12 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) SER218 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 44) SER206 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 49) ASN211 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 0 0 0 0 0 ( 50) SER212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 52) ARG214 0 0 0 0 0 0 0 0 0 0 8 5 1 0 0 0 0 0 0 0 ( 53) HIS215 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 10 0 0 0 0 ( 56) SER218 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 prot.sequence awgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdsnssagwkNSiRHnlSlhskfirvqnegtgksswwmlnpe/wgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdSagwkNSiRHnlSlhskfirvqnegtgksswwmlnpeg >6lbi_G:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FOXO1-DBD HOMODIMER BOUND TO A PALINDROMIC DNA SEQUENCE organism=? DNA sequence DA(E1):DT(F20) DC(E2):DG(F19) DC(E3):DG(F18) DG(E4):DC(F17) DT(E5):DA(F16) DA(E6):DT(F15) DA(E7):DT(F14) DA(E8):DT(F13) DC(E9):DG(F12) DA(E10):DT(F11) DT(E11):DA(F10) DG(E12):DC(F9) DT(E13):DA(F8) DT(E14):DA(F7) DT(E15):DA(F6) DA(E16):DT(F5) DC(E17):DG(F4) DG(E18):DC(F3) DG(E19):DC(F2) DT(E20):DA(F1) chainG ( 54) ASN211 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 ( 55) SER212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 57) ARG214 0 0 0 0 0 0 0 0 0 0 8 3 1 0 0 0 0 0 0 0 ( 58) HIS215 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 14 1 0 0 0 ( 61) SER218 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 prot.sequence nawgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdsnssagwkNSiRHnlSlhskfirvqnegtgksswwmln >6lbi_GH:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FOXO1-DBD HOMODIMER BOUND TO A PALINDROMIC DNA SEQUENCE organism=HOMO SAPIENS DNA sequence DA(E1):DT(F20) DC(E2):DG(F19) DC(E3):DG(F18) DG(E4):DC(F17) DT(E5):DA(F16) DA(E6):DT(F15) DA(E7):DT(F14) DA(E8):DT(F13) DC(E9):DG(F12) DA(E10):DT(F11) DT(E11):DA(F10) DG(E12):DC(F9) DT(E13):DA(F8) DT(E14):DA(F7) DT(E15):DA(F6) DA(E16):DT(F5) DC(E17):DG(F4) DG(E18):DC(F3) DG(E19):DC(F2) DT(E20):DA(F1) chainG ( 54) ASN211 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 ( 55) SER212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 57) ARG214 0 0 0 0 0 0 0 0 0 0 8 3 1 0 0 0 0 0 0 0 ( 58) HIS215 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 14 1 0 0 0 ( 61) SER218 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 chainH ( 48) ASN211 0 0 0 0 0 2 10 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) SER212 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG214 0 0 0 0 0 0 0 1 7 11 0 0 0 0 0 0 0 0 0 0 ( 52) HIS215 0 0 0 0 7 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) SER218 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU219 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nawgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdsnssagwkNSiRHnlSlhskfirvqnegtgksswwmln/nawgsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdagwkNSiRHnlSLhskfirvqneksswwmln >6lbi_KL:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FOXO1-DBD HOMODIMER BOUND TO A PALINDROMIC DNA SEQUENCE organism=? DNA sequence DA(J1):DT(I20) DC(J2):DG(I19) DC(J3):DG(I18) DG(J4):DC(I17) DT(J5):DA(I16) DA(J6):DT(I15) DA(J7):DT(I14) DA(J8):DT(I13) DC(J9):DG(I12) DA(J10):DT(I11) DT(J11):DA(I10) DG(J12):DC(I9) DT(J13):DA(I8) DT(J14):DA(I7) DT(J15):DA(I6) DA(J16):DT(I5) DC(J17):DG(I4) DG(J18):DC(I3) DG(J19):DC(I2) DT(J20):DA(I1) chainK ( 48) SER205 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 54) ASN211 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) SER212 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG214 0 0 0 0 0 0 0 1 10 10 0 0 0 0 0 0 0 0 0 0 ( 58) HIS215 0 0 0 1 10 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) SER218 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 51) ASN211 0 0 0 0 0 0 0 0 0 0 0 0 1 11 4 0 0 0 0 0 ( 52) SER212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 54) ARG214 0 0 0 0 0 0 0 0 0 0 13 8 1 0 0 0 0 0 0 0 ( 55) HIS215 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 12 1 0 0 0 ( 58) SER218 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 ( 59) LEU219 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence nawgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdsnSsagwkNSiRHnlSlhskfirvqnksswwmlnp/rrnawgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdksagwkNSiRHnlSLhskfirvqnksswwmln >6lbm_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FOXC2-DBD BOUND TO A PALINDROMIC DNA SEQUENCE organism=HOMO SAPIENS DNA sequence DG(A1):DC(B20) DG(A2):DC(B19) DT(A3):DA(B18) DG(A4):DC(B17) DT(A5):DA(B16) DA(A6):DT(B15) DA(A7):DT(B14) DA(A8):DT(B13) DC(A9):DG(B12) DA(A10):DT(B11) DT(A11):DA(B10) DG(A12):DC(B9) DT(A13):DA(B8) DT(A14):DA(B7) chainC ( 48) ASN118 0 0 0 0 0 3 8 0 0 0 0 0 0 0 ( 49) SER119 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 51) ARG121 0 0 0 0 0 0 0 1 7 9 0 0 0 0 ( 52) HIS122 0 0 0 0 11 10 8 0 0 0 0 0 0 0 ( 55) SER125 0 0 0 0 0 0 2 4 0 0 0 0 0 0 prot.sequence pkppysyialitmaiqnapekkitlngiyqfimdrfpfyrenkqgwqNSiRHnlSlnecfvkvprddkkgsywtldpdsynmfengsflrrrrrf >6lc1_AD:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL BASIS OF NR4A1 BOUND TO THE HUMAN PITUITARY PROOPIOMELANOCORTIN GENE PROMOTER organism=HOMO SAPIENS DNA sequence DT(F3):DA(C25) DG(F4):DC(C24) DA(F5):DT(C23) DT(F6):DA(C22) DA(F7):DT(C21) DT(F8):DA(C20) DT(F9):DA(C19) DT(F10):DA(C18) DA(F11):DT(C17) DC(F12):DG(C16) DC(F13):DG(C15) DT(F14):DA(C14) DC(F15):DG(C13) DC(F16):DG(C12) DA(F17):DT(C11) DA(F18):DT(C10) DA(F19):DT(C9) DT(F20):DA(C8) DG(F21):DC(C7) DC(F22):DG(C6) DC(F23):DG(C5) DA(F24):DT(C4) DG(F25):DC(C3) DG(F26):DC(C2) chainA ( 11) CYS276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 14) TYR279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 20) GLU285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 2 0 0 0 0 ( 23) LYS288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 1 0 0 0 0 0 ( 27) LYS292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 28) ARG293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 ( 81) ARG346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 7 2 0 0 0 0 0 ( 83) ARG348 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 0 chainD ( 12) CYS276 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) TYR279 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU285 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS288 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS292 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG293 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG346 0 0 0 1 8 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG348 0 0 0 0 0 0 0 3 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rcavcgdnasCqhYgvrtcEgcKgffKRtvqknakyiclankdcpvdkrrrnrcqfcrfqkclavgmvkevvrtdslkgrRgRlps/grcavcgdnasCqhYgvrtcEgcKgffKRtvqknakyiclankdcpvdkrrrnrcqfcrfqkclavgmvkevvrtdslkgrRgRlp >6lc1_D:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL BASIS OF NR4A1 BOUND TO THE HUMAN PITUITARY PROOPIOMELANOCORTIN GENE PROMOTER organism=HOMO SAPIENS DNA sequence DC(C2):DG(F26) DC(C3):DG(F25) DT(C4):DA(F24) DG(C5):DC(F23) DG(C6):DC(F22) DC(C7):DG(F21) DA(C8):DT(F20) DT(C9):DA(F19) DT(C10):DA(F18) DT(C11):DA(F17) DG(C12):DC(F16) DG(C13):DC(F15) DA(C14):DT(F14) DG(C15):DC(F13) DG(C16):DC(F12) DT(C17):DA(F11) DA(C18):DT(F10) DA(C19):DT(F9) DA(C20):DT(F8) DT(C21):DA(F7) DA(C22):DT(F6) DT(C23):DA(F5) DC(C24):DG(F4) DA(C25):DT(F3) chainD ( 12) CYS276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 15) TYR279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 21) GLU285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 ( 24) LYS288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 ( 28) LYS292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 29) ARG293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 ( 82) ARG346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 8 1 0 0 0 ( 84) ARG348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 3 0 0 0 0 0 0 0 prot.sequence grcavcgdnasCqhYgvrtcEgcKgffKRtvqknakyiclankdcpvdkrrrnrcqfcrfqkclavgmvkevvrtdslkgrRgRlp >6lct_B: title=CRYSTAL STRUCTURE OF CATALYTIC INACTIVE CHLOROPLAST RESOLVASE NTMOC1 IN COMPLEX WITH HOLLIDAY JUNCTION organism=NICOTIANA TABACUM DNA sequence DC(E10):DG(D9) DA(E11):DT(D8) DG(E12):DC(D7) DC(E13):DG(D6) DA(E14):DT(D5) DA(E15):DT(D4) DG(E16):DC(D3) DG(E17):DC(D2) DC(E18):DG(D1) chainB ( 74) ASP183 29 0 0 0 0 0 0 0 0 prot.sequence gwvigvapdtsgalallkpnqppqvfdsphlkvlvgkgvrkrldakaivqllksfeapigttvyvaqstpypqDgkqgwwsggfgygmwigilvasgfsvipvpssawksefqltkersnkdysrqvasqlfpslssllkrkkahgraaalliaaygkg >6ldi_CDFGH:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=THE CRYO-EM STRUCTURE OF E. COLI CUER TRANSCRIPTION ACTIVATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(139):DG(251) DT(140):DA(250) DT(141):DA(249) DG(142):DC(248) DA(143):DT(247) DC(144):DG(246) DC(145):DG(245) DT(146):DA(244) DT(147):DA(243) DC(148):DG(242) DC(149):DG(241) DC(150):DG(240) DC(151):DG(239) DT(152):DA(238) DT(153):DA(237) DG(154):DC(236) DC(155):DG(235) DT(156):DA(234) DG(157):DC(233) DG(158):DC(232) DA(159):DT(231) DA(160):DT(230) DG(161):DC(229) DG(162):DC(228) DT(163):DA(227) DT(164):DA(226) DT(165):DA(225) DA(166):DA(224) DT(167):DT(223) DA(168):DA(222) DA(169):DA(221) DT(170):DT(220) DG(171):DG(219) DG(172):DG(218) DG(173):DG(217) DA(174):DA(216) DG(175):DG(215) DC(176):DC(214) DT(177):DT(213) DG(178):DG(212) DT(179):DA(211) DC(180):DG(210) DA(181):DT(29) DC(182):DG(28) DG(183):DC(27) DG(184):DC(26) DA(185):DT(25) DT(186):DA(24) DG(187):DC(23) DC(188):DG(22) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (199) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (444) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (494) LYS496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (536) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (545) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainD (303) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (774) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (775) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainF ( 4) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (273) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (362) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (364) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) LEU519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (375) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) LEU573 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) ARG584 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) GLU585 0 1 8 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) ARG586 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) GLN589 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminaKpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginiele/fdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/rttDpVRmyMreMgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNrglqfldliqegniglmkavdkFEyrRgYkfSTYaTWWirQaiTRsiadqartiripvHmietinklnrisRqmlqemgreptpeelaermlmpedkirkvlkiakepIsmeTpIgddedshLgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvtRERirQieakalrklrhpsrsevlrsfld/mnisdvakitgltsKaiRFyeekglvtppmrsengYrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalanacpgddsadcpiienls/mnisdvakitgltsKaiRFyeekglvtppmrsengYrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalanacpgddsadcpiienlsg >6ldi_G:Putative_DNA-binding_domain; title=THE CRYO-EM STRUCTURE OF E. COLI CUER TRANSCRIPTION ACTIVATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(139):DG(251) DT(140):DA(250) DT(141):DA(249) DG(142):DC(248) DA(143):DT(247) DC(144):DG(246) DC(145):DG(245) DT(146):DA(244) DT(147):DA(243) DC(148):DG(242) DC(149):DG(241) DC(150):DG(240) DC(151):DG(239) DT(152):DA(238) DT(153):DA(237) DG(154):DC(236) DC(155):DG(235) DT(156):DA(234) DG(157):DC(233) DG(158):DC(232) DA(159):DT(231) DA(160):DT(230) DG(161):DC(229) DG(162):DC(228) DT(163):DA(227) DT(164):DA(226) DT(165):DA(225) DA(166):DA(224) DT(167):DT(223) DA(168):DA(222) DA(169):DA(221) DT(170):DT(220) DG(171):DG(219) DG(172):DG(218) DG(173):DG(217) DA(174):DA(216) DG(175):DG(215) DC(176):DC(214) DT(177):DT(213) DG(178):DG(212) DT(179):DA(211) DC(180):DG(210) DA(181):DT(29) DC(182):DG(28) DG(183):DC(27) DG(184):DC(26) DA(185):DT(25) DT(186):DA(24) DG(187):DC(23) DC(188):DG(22) chainG ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnisdvakitgltsKaiRFyeekglvtppmrsengYrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalanacpgddsadcpiienls >6ldm_A:Homeodomain-like; title=STRUCTURAL BASIS OF G-QUADRUPLEX DNA RECOGNITION BY THE YEAST TELOMERIC PROTEIN RAP1 organism=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) DNA sequence DG(B17) DG(B16) DG(B15) DT(B14) DG(B13) DG(B12) DG(B11) DT(B10) DG(B9) DG(B8) DG(B7) DT(B1) DT(B2) DG(B3):DG(B7) DG(B4):DG(B8) DG(B5):DG(B9) DT(B6) chainA ( 39) THR399 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) HIS405 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) VAL409 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 12 0 (141) ARG523 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence asftdeedefildvvrknptrrtthtlydeishyvpnhTgnsirHRfRVylskrleyvyevdkfgklvrdddgnliktkvlppsikrkfsadedytlaiavkkqfyrdlfqidpdtgrslitdepnfaayrtqsrrgpiaReffkhfaeehaahtenawrdrfrkfllaygiddyisyyeaekaqnrpepm >6le9_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE HUMAN TELOMERIC NUCLEOSOME DISPLAYS DISTINCT STRUCTURAL AND DYNAMIC PROPERTIES organism=HOMO SAPIENS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DT(J-69):DA(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DG(J-66):DC(I66) DG(J-65):DC(I65) DG(J-64):DC(I64) DT(J-63):DA(I63) DT(J-62):DA(I62) DA(J-61):DT(I61) DG(J-60):DC(I60) DG(J-59):DC(I59) DG(J-58):DC(I58) DT(J-57):DA(I57) DT(J-56):DA(I56) DA(J-55):DT(I55) DG(J-54):DC(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DT(J-51):DA(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DG(J-48):DC(I48) DG(J-47):DC(I47) DG(J-46):DC(I46) DT(J-44):DA(I45) DA(J-43):DT(I43) DG(J-42):DC(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DT(J-38):DA(I38) DA(J-37):DT(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DT(J-33):DA(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DG(J-29):DC(I29) DG(J-28):DC(I28) DT(J-27):DA(I27) DT(J-26):DA(I26) DA(J-25):DC(I24) DG(J-23):DC(I23) DG(J-22):DC(I22) DT(J-21):DA(I21) DT(J-20):DA(I20) DA(J-19):DT(I19) DG(J-18):DC(I18) DG(J-17):DC(I17) DG(J-16):DC(I16) DT(J-15):DA(I15) DT(J-14):DA(I14) DA(J-13):DT(I13) DG(J-12):DC(I12) DG(J-11):DC(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DT(J-3):DA(I3) DT(J-2):DA(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DG(J1):DC(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DT(J4):DA(I-4) DA(J5):DT(I-5) DG(J6):DC(I-6) DG(J7):DC(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DT(J10):DA(I-10) DA(J11):DT(I-11) DG(J12):DC(I-12) DG(J13):DC(I-13) DG(J14):DC(I-14) DT(J15):DA(I-15) DT(J16):DA(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DG(J19):DC(I-19) DG(J20):DC(I-20) DT(J21):DA(I-21) DT(J22):DA(I-22) DA(J23):DT(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DT(J27):DA(I-27) DT(J28):DA(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DG(J31):DC(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DT(J34):DA(I-34) DA(J35):DT(I-35) DG(J36):DC(I-36) DG(J37):DC(I-37) DG(J38):DC(I-38) DT(J39):DA(I-39) DT(J40):DA(I-40) DA(J41):DT(I-41) DG(J42):DC(I-42) DG(J43):DC(I-43) DG(J44):DC(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DG(J50):DC(I-50) DT(J51):DA(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DG(J54):DC(I-54) DG(J55):DC(I-55) DG(J56):DC(I-56) DT(J57):DA(I-57) DT(J58):DA(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DT(J64):DT(I-65) DG(J66):DC(I-66) DG(J67):DC(I-67) DG(J68):DC(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) TYR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) TYR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RyrPgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpaiRrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysvyvYkvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/Ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysvyvYkvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6le9_D:Histone-fold; title=THE HUMAN TELOMERIC NUCLEOSOME DISPLAYS DISTINCT STRUCTURAL AND DYNAMIC PROPERTIES organism=HOMO SAPIENS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DC(I-68):DG(J68) DC(I-67):DG(J67) DC(I-66):DG(J66) DT(I-65):DT(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DA(I-58):DT(J58) DA(I-57):DT(J57) DC(I-56):DG(J56) DC(I-55):DG(J55) DC(I-54):DG(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DA(I-51):DT(J51) DC(I-50):DG(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DC(I-44):DG(J44) DC(I-43):DG(J43) DC(I-42):DG(J42) DT(I-41):DA(J41) DA(I-40):DT(J40) DA(I-39):DT(J39) DC(I-38):DG(J38) DC(I-37):DG(J37) DC(I-36):DG(J36) DT(I-35):DA(J35) DA(I-34):DT(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DC(I-31):DG(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DA(I-28):DT(J28) DA(I-27):DT(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DT(I-23):DA(J23) DA(I-22):DT(J22) DA(I-21):DT(J21) DC(I-20):DG(J20) DC(I-19):DG(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DA(I-16):DT(J16) DA(I-15):DT(J15) DC(I-14):DG(J14) DC(I-13):DG(J13) DC(I-12):DG(J12) DT(I-11):DA(J11) DA(I-10):DT(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DC(I-7):DG(J7) DC(I-6):DG(J6) DT(I-5):DA(J5) DA(I-4):DT(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DC(I-1):DG(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DA(I2):DT(J-2) DA(I3):DT(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DC(I11):DG(J-11) DC(I12):DG(J-12) DT(I13):DA(J-13) DA(I14):DT(J-14) DA(I15):DT(J-15) DC(I16):DG(J-16) DC(I17):DG(J-17) DC(I18):DG(J-18) DT(I19):DA(J-19) DA(I20):DT(J-20) DA(I21):DT(J-21) DC(I22):DG(J-22) DC(I23):DG(J-23) DC(I24):DA(J-25) DA(I26):DT(J-26) DA(I27):DT(J-27) DC(I28):DG(J-28) DC(I29):DG(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DA(I33):DT(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DT(I37):DA(J-37) DA(I38):DT(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DA(I45):DT(J-44) DC(I46):DG(J-46) DC(I47):DG(J-47) DC(I48):DG(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DA(I51):DT(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DC(I54):DG(J-54) DT(I55):DA(J-55) DA(I56):DT(J-56) DA(I57):DT(J-57) DC(I58):DG(J-58) DC(I59):DG(J-59) DC(I60):DG(J-60) DT(I61):DA(J-61) DA(I62):DT(J-62) DA(I63):DT(J-63) DC(I64):DG(J-64) DC(I65):DG(J-65) DC(I66):DG(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DA(I69):DT(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) TYR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsRkesysvyvYkvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6ler_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=169 BP NUCLEOSOME HARBORING NON-IDENTICAL COHESIVE DNA TERMINI. organism=HOMO SAPIENS DNA sequence DC(I-82):DG(J82) DC(I-81):DG(J81) DA(I-80):DT(J80) DA(I-79):DT(J79) DA(I-78):DT(J78) DA(I-77):DT(J77) DA(I-76):DT(J76) DA(I-75):DT(J75) DA(I-74):DT(J74) DA(I-73):DT(J73) DA(I-72):DT(J72) DA(I-71):DT(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DC(I-67):DG(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DC(I31):DG(J-31) DG(I32):DC(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DG(I56):DC(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DC(I64):DG(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DG(I69):DC(J-69) DC(I70):DG(J-70) DA(I71):DT(J-71) DA(I72):DT(J-72) DA(I73):DT(J-73) DA(I74):DT(J-74) DA(I75):DT(J-75) DA(I76):DT(J-76) DA(I77):DT(J-77) DA(I78):DT(J-78) DA(I79):DT(J-79) DA(I80):DT(J-80) DC(I81):DG(J-81) DG(I82):DC(J-82) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG42 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 1) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysiyvykvlkqvhpdtgisskAmgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyRpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dnIqGitkpairrlarrggvkrisgliYeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/Krsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6ler_KLMNOPQR:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=169 BP NUCLEOSOME HARBORING NON-IDENTICAL COHESIVE DNA TERMINI. organism=HOMO SAPIENS DNA sequence DC(T-82):DG(S82) DC(T-81):DG(S81) DA(T-80):DT(S80) DA(T-79):DT(S79) DA(T-78):DT(S78) DA(T-77):DT(S77) DA(T-76):DT(S76) DA(T-75):DT(S75) DA(T-74):DT(S74) DA(T-73):DT(S73) DA(T-72):DT(S72) DA(T-71):DT(S71) DC(T-70):DG(S70) DA(T-69):DT(S69) DG(T-68):DC(S68) DC(T-67):DG(S67) DA(T-66):DT(S66) DT(T-65):DA(S65) DC(T-64):DG(S64) DC(T-63):DG(S63) DC(T-62):DG(S62) DG(T-61):DC(S61) DG(T-60):DC(S60) DT(T-59):DA(S59) DG(T-58):DC(S58) DC(T-57):DG(S57) DC(T-56):DG(S56) DG(T-55):DC(S55) DA(T-54):DT(S54) DG(T-53):DC(S53) DG(T-52):DC(S52) DC(T-51):DG(S51) DC(T-50):DG(S50) DG(T-49):DC(S49) DC(T-48):DG(S48) DT(T-47):DA(S47) DC(T-46):DG(S46) DA(T-45):DT(S45) DA(T-44):DT(S44) DT(T-43):DA(S43) DT(T-42):DA(S42) DG(T-41):DC(S41) DG(T-40):DC(S40) DT(T-39):DA(S39) DC(T-38):DG(S38) DG(T-37):DC(S37) DT(T-36):DA(S36) DA(T-35):DT(S35) DG(T-34):DC(S34) DA(T-33):DT(S33) DC(T-32):DG(S32) DA(T-31):DT(S31) DG(T-30):DC(S30) DC(T-29):DG(S29) DT(T-28):DA(S28) DC(T-27):DG(S27) DT(T-26):DA(S26) DA(T-25):DT(S25) DG(T-24):DC(S24) DC(T-23):DG(S23) DA(T-22):DT(S22) DC(T-21):DG(S21) DC(T-20):DG(S20) DG(T-19):DC(S19) DC(T-18):DG(S18) DT(T-17):DA(S17) DT(T-16):DA(S16) DA(T-15):DT(S15) DA(T-14):DT(S14) DA(T-13):DT(S13) DC(T-12):DG(S12) DG(T-11):DC(S11) DC(T-10):DG(S10) DA(T-9):DT(S9) DC(T-8):DG(S8) DG(T-7):DC(S7) DT(T-6):DA(S6) DA(T-5):DT(S5) DC(T-4):DG(S4) DG(T-3):DC(S3) DC(T-2):DG(S2) DG(T-1):DC(S1) DC(T0):DG(S0) DT(T1):DA(S-1) DG(T2):DC(S-2) DT(T3):DA(S-3) DC(T4):DG(S-4) DT(T5):DA(S-5) DA(T6):DT(S-6) DC(T7):DG(S-7) DC(T8):DG(S-8) DG(T9):DC(S-9) DC(T10):DG(S-10) DG(T11):DC(S-11) DT(T12):DA(S-12) DT(T13):DA(S-13) DT(T14):DA(S-14) DT(T15):DA(S-15) DA(T16):DT(S-16) DA(T17):DT(S-17) DC(T18):DG(S-18) DC(T19):DG(S-19) DG(T20):DC(S-20) DC(T21):DG(S-21) DC(T22):DG(S-22) DA(T23):DT(S-23) DC(T24):DG(S-24) DT(T25):DA(S-25) DA(T26):DT(S-26) DG(T27):DC(S-27) DA(T28):DT(S-28) DA(T29):DT(S-29) DG(T30):DC(S-30) DC(T31):DG(S-31) DG(T32):DC(S-32) DC(T33):DG(S-33) DT(T34):DA(S-34) DT(T35):DA(S-35) DA(T36):DT(S-36) DC(T37):DG(S-37) DT(T38):DA(S-38) DA(T39):DT(S-39) DG(T40):DC(S-40) DT(T41):DA(S-41) DC(T42):DG(S-42) DT(T43):DA(S-43) DC(T44):DG(S-44) DC(T45):DG(S-45) DA(T46):DT(S-46) DG(T47):DC(S-47) DG(T48):DC(S-48) DC(T49):DG(S-49) DA(T50):DT(S-50) DC(T51):DG(S-51) DG(T52):DC(S-52) DT(T53):DA(S-53) DG(T54):DC(S-54) DT(T55):DA(S-55) DG(T56):DC(S-56) DA(T57):DT(S-57) DG(T58):DC(S-58) DA(T59):DT(S-59) DC(T60):DG(S-60) DG(T62):DC(S-62) DG(T63):DC(S-63) DC(T64):DG(S-64) DA(T65):DT(S-65) DC(T66):DG(S-66) DA(T67):DT(S-67) DT(T68):DA(S-68) DG(T69):DC(S-69) DC(T70):DG(S-70) DA(T71):DT(S-71) DA(T72):DT(S-72) DA(T73):DT(S-73) DA(T74):DT(S-74) DA(T75):DT(S-75) DA(T76):DT(S-76) DA(T77):DT(S-77) DA(T78):DT(S-78) DA(T79):DT(S-79) DA(T80):DT(S-80) DC(T81):DG(S-81) DG(T82):DC(S-82) chainK ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainO ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 1) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysiyvykvlkqvhpdtgisskAmgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/Krsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6lew_A:Thiolase-like; title=RVD HA SPECIFICALLY CONTACTS 5MC THROUGH VAN DER WAALS INTERACTIONS organism=Xanthomonas campestris pv. armoraciae DNA sequence DG(J-13):DC(I13) DA(J-12):DT(I12) DG(J-11):DC(I11) DA(J-10):DT(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DC(J-7):DG(I7) DG(J-6):5CM(I6) DA(J-5):DT(I5) DA(J-4):DT(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DG(J-1):DC(I1) DA(J0):DT(I0) DC(J1):DG(I-1) DA(J2):DT(I-2) chainA ( 33) ARG266 0 0 0 0 0 0 0 0 0 7 11 2 0 0 0 0 ( 68) ASP301 0 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 (102) ASP335 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 (136) ASP369 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 (238) ALA471 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (272) ASN505 0 0 0 0 0 2 9 5 0 0 0 0 0 0 0 0 (297) ASP539 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 (331) ASN573 0 0 0 2 9 4 0 0 0 0 0 0 0 0 0 0 (399) ASP641 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence garalealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashAggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrgltpqqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpaltndhlvalaclggrpaldavkkleh >6lff_A:lambda_repressor-like_DNA-binding_domains; title=TRANSCRIPTION FACTOR SATB1 CUTR1 DOMAIN IN COMPLEX WITH A PHOSPHOROTHIOATE DNA organism=Homo sapiens DNA sequence DG(C1):DA(D10) DA(C4):DT(D9) DA(C5):DT(D4) DT(C6):DA(D3) DA(C7):DC(D2) DT(C8):DG(D1) chainA ( 32) GLN402 0 0 1 0 0 0 ( 37) GLU407 0 4 0 0 0 0 prot.sequence vsseiyqwvrdelkragisqavfarvafnrTQgllsEilrkeedpktasqsllvnlramqnflqlpeaerdriyqderersl >6lff_AB:lambda_repressor-like_DNA-binding_domains; title=TRANSCRIPTION FACTOR SATB1 CUTR1 DOMAIN IN COMPLEX WITH A PHOSPHOROTHIOATE DNA organism=Homo sapiens DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DA(D3):DT(C10) DT(D4):DA(C9) DT(D9):DT(C8) DA(D10):DA(C7) DG(D11):DT(C6) DC(D12):DA(C5) chainA ( 32) GLN402 0 0 0 0 0 0 0 1 ( 37) GLU407 0 0 0 0 4 0 0 0 chainB ( 31) THR401 0 0 3 3 0 0 0 0 ( 32) GLN402 0 0 0 0 1 10 14 0 ( 36) SER406 0 0 0 0 2 5 0 0 ( 37) GLU407 0 0 0 0 5 0 0 0 prot.sequence vsseiyqwvrdelkragisqavfarvafnrtQgllsEilrkeedpktasqsllvnlramqnflqlpeaerdriyqderersl/vsseiyqwvrdelkragisqavfarvafnrTQgllSEilrkeedpktasqsllvnlramqnflqlpeaerdriyqderersl >6lnb_B: title=CRYOEM STRUCTURE OF CASCADE-TNIQ-DSDNA COMPLEX organism=? DNA sequence DC(N45) DT(N44) DG(N43) DG(N42) DA(N41) DA(N40) DG(N39) DT(N38) DG(N37) DC(N36) DC(N35) DG(N34) DC(N33) DC(N32) DC(N31) DG(N30) DA(N29) DA(N28) DC(N27) DT(N26) DA(N25) DC(N24) DA(N23) DG(N22) DG(N21) DC(N20) DT(N14) DA(N15) DG(N16) DA(N17) DC(N18) DG(N19):DC(N20) chainB (298) MET346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence klptnlayersidpsdvcffvvwpddrktpltynsrtphqvdfchvpygashiecsfsvsfsselrqpykcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvfteksrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlspaqetindmhflmanlikggMfqh >6lnb_BCDEFG: title=CRYOEM STRUCTURE OF CASCADE-TNIQ-DSDNA COMPLEX organism=VIBRIO CHOLERAE DNA sequence DC(N45) DT(N44) DG(N43) DG(N42) DA(N41) DA(N40) DG(N39) DT(N38) DG(N37) DC(N36) DC(N35) DG(N34) DC(N33) DC(N32) DC(N31) DG(N30) DA(N29) DA(N28) DC(N27) DT(N26) DA(N25) DC(N24) DA(N23) DG(N22) DG(N21) DC(N20) DT(N14) DA(N15) DG(N16) DA(N17) DC(N18) DG(N19):DC(N20) chainG ( 68) ASN69 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) PRO70 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) HIS71 0 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) PHE227 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) THR240 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) SER243 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 6) ASN6 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) LYS102 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) PHE227 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) GLN241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) MET346 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) GLN348 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 66) GLN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 ( 69) PRO70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 ( 70) HIS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 (226) PHE227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) GLU229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LYS230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (331) MET346 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 68) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 69) PRO70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 70) HIS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 (226) PHE227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (230) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (333) MET346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 (335) GLN348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 5) ASN6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (101) LYS102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (226) PHE227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 (329) MET346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (331) GLN348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 chainB (298) MET346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence klptnlayersidpsdvcffvvwpddrktpltynsrtphqvdfchvpygashiecsfsvsfsselrqpykcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvfteksrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlspaqetindmhflmanlikggMfqh/klptNlayersidpsdvcffvvwpddrktpltynsrtllgqmeaaslaydvsgqpiksataealaqgnphqvdfchvpygashiecsfsvsfsselrqpyKcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFtesrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlstpaqetindmhflmanlikggMfQhk/klptnlayersidpsdvcffvvwpddrktpltynsrtllgqmeaaslaydvsgqpiksataealaqgNPHqvdfchvpygashiecsfsvsfsselrqpykcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFtqnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggMfQh/klptnlayersidpsdvcffvvwpddrktpltynsrtllgqmeaaslaydvsgqpiksataealaQgnPHqvdfchvpygashiecsfsvsfsselrqpykcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFtEKnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsapaqetindmhflmanlikggMfqhk/mklptNlayersidpsdvcffvvwpddrktpltynsrtllgqmeaaslaydvsgqpiksataealaqgNPHqvdfchvpygashiecsfsvsfsselrqpyKcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFtQnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsktpaqetindmhflmanlikggMfQhk/klptnlayersidpsdvcffvvwpddrktpltynsrtllgqmeaaslaydvsgqpiksataealaqgNPHqvdfchvpygashiecsfsvsfsselrqpykcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFtekTqnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggmfqhkgd >6lqf_A:ARID-like;FYVE/PHD_zinc_finger; title=CRYSTAL STRUCTURE OF ARABIDOPSIS ARID5 ARID-PHD CASSETTE IN COMPLEX WITH H3K4ME3 PEPTIDE AND DNA organism=ARABIDOPSIS THALIANA DNA sequence DT(C1):DA(B12) DT(C2):DA(B11) DT(C3):DA(B10) DA(C4):DT(B9) DG(C5):DC(B8) DA(C6):DT(B7) DT(C7):DA(B6) DC(C8):DG(B5) DT(C9):DA(B4) DA(C10):DT(B3) DA(C11):DT(B2) DA(C12):DT(B1) chainA ( 92) ARG646 0 0 0 0 0 1 0 0 0 0 0 0 ( 94) THR648 0 0 0 0 0 6 10 5 0 0 0 0 ( 98) ASN652 0 0 0 0 0 2 4 0 0 0 0 0 (102) ARG656 0 0 0 0 0 0 0 0 0 1 0 0 (158) LYS712 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkhdcgrahiqvcseeeflrdvmqfllirghtrlvppgglaefpdavlnskrldlfnlyrevvsrggfhvgnginwkgqvfskmrnhtltnRmTgvgNtlkRhyetylleyeyahddvdgecclicrsstagdwvncgscgewahfgcdrrpglgafKdyaktdgleyvcpncsv >6ltj_A:Histone-fold; title=STRUCTURE OF NUCLEOSOME-BOUND HUMAN BAF COMPLEX organism=? DNA sequence DT(X18):DA(Y136) DG(X19):DC(Y135) DC(X20):DG(Y134) DC(X21):DG(Y133) DG(X22):DC(Y132) DA(X23):DT(Y131) DG(X24):DC(Y130) DG(X25):DC(Y129) DC(X26):DG(Y128) DC(X27):DG(Y127) DG(X28):DC(Y126) DC(X29):DG(Y125) DT(X30):DA(Y124) DC(X31):DG(Y123) DA(X32):DT(Y122) DA(X33):DT(Y121) DT(X34):DA(Y120) DT(X35):DA(Y119) DG(X36):DC(Y118) DG(X37):DC(Y117) DT(X38):DA(Y116) DC(X39):DG(Y115) DG(X40):DC(Y114) DT(X41):DA(Y113) DA(X42):DT(Y112) DG(X43):DC(Y111) DA(X44):DT(Y110) DC(X45):DG(Y109) DA(X46):DT(Y108) DG(X47):DC(Y107) DC(X48):DG(Y106) DT(X49):DA(Y105) DC(X50):DG(Y104) DT(X51):DA(Y103) DA(X52):DT(Y102) DG(X53):DC(Y101) DC(X54):DG(Y100) DA(X55):DT(Y99) DC(X56):DG(Y98) DC(X57):DG(Y97) DG(X58):DC(Y96) DC(X59):DG(Y95) DT(X60):DA(Y94) DT(X61):DA(Y93) DA(X62):DT(Y92) DA(X63):DT(Y91) DA(X64):DT(Y90) DC(X65):DG(Y89) DG(X66):DC(Y88) DC(X67):DG(Y87) DA(X68):DT(Y86) DC(X69):DG(Y85) DG(X70):DC(Y84) DT(X71):DA(Y83) DA(X72):DT(Y82) DC(X73):DG(Y81) DG(X74):DC(Y80) DC(X75):DG(Y79) DG(X76):DC(Y78) DC(X77):DG(Y77) DT(X78):DA(Y76) DG(X79):DC(Y75) DT(X80):DA(Y74) DC(X81):DG(Y73) DC(X82):DG(Y72) DC(X83):DG(Y71) DC(X84):DG(Y70) DC(X85):DG(Y69) DG(X86):DC(Y68) DC(X87):DG(Y67) DG(X88):DC(Y66) DT(X89):DA(Y65) DT(X90):DA(Y64) DT(X91):DA(Y63) DT(X92):DA(Y62) DA(X93):DT(Y61) DA(X94):DT(Y60) DC(X95):DG(Y59) DC(X96):DG(Y58) DG(X97):DC(Y57) DC(X98):DG(Y56) DC(X99):DG(Y55) DA(X100):DT(Y54) DA(X101):DT(Y53) DG(X102):DC(Y52) DG(X103):DC(Y51) DG(X104):DC(Y50) DG(X105):DC(Y49) DA(X106):DT(Y48) DT(X107):DA(Y47) DT(X108):DA(Y46) DA(X109):DT(Y45) DC(X110):DG(Y44) DT(X111):DA(Y43) DC(X112):DG(Y42) DC(X113):DG(Y41) DC(X114):DG(Y40) DT(X115):DA(Y39) DA(X116):DT(Y38) DG(X117):DC(Y37) DT(X118):DA(Y36) DC(X119):DG(Y35) DT(X120):DA(Y34) DC(X121):DG(Y33) DC(X122):DG(Y32) DA(X123):DT(Y31) DG(X124):DC(Y30) DG(X125):DC(Y29) DC(X126):DG(Y28) DA(X127):DT(Y27) DC(X128):DG(Y26) DG(X129):DC(Y25) DT(X130):DA(Y24) DG(X131):DC(Y23) DT(X132):DA(Y22) DC(X133):DG(Y21) chainA ( 40) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger >6ltj_ABCDEFGH: title=STRUCTURE OF NUCLEOSOME-BOUND HUMAN BAF COMPLEX organism=XENOPUS LAEVIS DNA sequence DT(Y18):DA(X136) DC(Y19):DG(X135) DT(Y20):DA(X134) DG(Y21):DC(X133) DA(Y22):DT(X132) DC(Y23):DG(X131) DA(Y24):DT(X130) DC(Y25):DG(X129) DG(Y26):DC(X128) DT(Y27):DA(X127) DG(Y28):DC(X126) DC(Y29):DG(X125) DC(Y30):DG(X124) DT(Y31):DA(X123) DG(Y32):DC(X122) DG(Y33):DC(X121) DA(Y34):DT(X120) DG(Y35):DC(X119) DA(Y36):DT(X118) DC(Y37):DG(X117) DT(Y38):DA(X116) DA(Y39):DT(X115) DG(Y40):DC(X114) DG(Y41):DC(X113) DG(Y42):DC(X112) DA(Y43):DT(X111) DG(Y44):DC(X110) DT(Y45):DA(X109) DA(Y46):DT(X108) DA(Y47):DT(X107) DT(Y48):DA(X106) DC(Y49):DG(X105) DC(Y50):DG(X104) DC(Y51):DG(X103) DC(Y52):DG(X102) DT(Y53):DA(X101) DT(Y54):DA(X100) DG(Y55):DC(X99) DG(Y56):DC(X98) DC(Y57):DG(X97) DG(Y58):DC(X96) DG(Y59):DC(X95) DT(Y60):DA(X94) DT(Y61):DA(X93) DA(Y62):DT(X92) DA(Y63):DT(X91) DA(Y64):DT(X90) DA(Y65):DT(X89) DC(Y66):DG(X88) DG(Y67):DC(X87) DC(Y68):DG(X86) DG(Y69):DC(X85) DG(Y70):DC(X84) DG(Y71):DC(X83) DG(Y72):DC(X82) DG(Y73):DC(X81) DA(Y74):DT(X80) DC(Y75):DG(X79) DA(Y76):DT(X78) DG(Y77):DC(X77) DC(Y78):DG(X76) DG(Y79):DC(X75) DC(Y80):DG(X74) DG(Y81):DC(X73) DT(Y82):DA(X72) DA(Y83):DT(X71) DC(Y84):DG(X70) DG(Y85):DC(X69) DT(Y86):DA(X68) DG(Y87):DC(X67) DC(Y88):DG(X66) DG(Y89):DC(X65) DT(Y90):DA(X64) DT(Y91):DA(X63) DT(Y92):DA(X62) DA(Y93):DT(X61) DA(Y94):DT(X60) DG(Y95):DC(X59) DC(Y96):DG(X58) DG(Y97):DC(X57) DG(Y98):DC(X56) DT(Y99):DA(X55) DG(Y100):DC(X54) DC(Y101):DG(X53) DT(Y102):DA(X52) DA(Y103):DT(X51) DG(Y104):DC(X50) DA(Y105):DT(X49) DG(Y106):DC(X48) DC(Y107):DG(X47) DT(Y108):DA(X46) DG(Y109):DC(X45) DT(Y110):DA(X44) DC(Y111):DG(X43) DT(Y112):DA(X42) DA(Y113):DT(X41) DC(Y114):DG(X40) DG(Y115):DC(X39) DA(Y116):DT(X38) DC(Y117):DG(X37) DC(Y118):DG(X36) DA(Y119):DT(X35) DA(Y120):DT(X34) DT(Y121):DA(X33) DT(Y122):DA(X32) DG(Y123):DC(X31) DA(Y124):DT(X30) DG(Y125):DC(X29) DC(Y126):DG(X28) DG(Y127):DC(X27) DG(Y128):DC(X26) DC(Y129):DG(X25) DC(Y130):DG(X24) DT(Y131):DA(X23) DC(Y132):DG(X22) DG(Y133):DC(X21) DG(Y134):DC(X20) DC(Y135):DG(X19) DA(Y136):DT(X18) chainA ( 40) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 40) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 21) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence gtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/dniqgitkpairrlarrggvkrisgliyeetrgvlkvflEnvirdavtytehakrktvtamdvvyalkrqgrtlygfg/trssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllggvtiaqggvlpn/syaiyvykvlkqvhpdtgisskamsiMnsfvndvferiageasrlahynkrstitsreiqtagrlllpgelakhavsegtkavtkyts/gtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkrisgliyeetrgvlkvfleNvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ktrssraglqfpvgrvhrllRkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllggvtiaqggvlp/kesyaiyvykvlkqvhpdtgIsskamsImnsfvndvferiageasrlahynkrstitsreiqtagrlllpgelakhavsegtkavtkyts >6lts_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX COMPRISING A TRUNCATED SIGMA FINGER organism=THERMUS THERMOPHILUS HB8 DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) chainC (414) GLU421 10 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrEragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask >6lts_CD: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX COMPRISING A TRUNCATED SIGMA FINGER organism=THERMUS THERMOPHILUS HB8 DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) chainC (414) GLU421 10 0 0 0 0 0 0 0 0 0 chainD (489) LYS491 0 0 0 0 0 0 0 1 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrEragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarraKarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea >6lty_AB:lambda_repressor-like_DNA-binding_domains; title=DNA BOUND ANTITOXIN HIGA3 organism=Mycobacterium tuberculosis H37Rv DNA sequence DC(D1):DG(C20) DT(D2):DG(C18) DT(D4):DA(C17) DA(D5):DT(C16) DG(D7):DC(C15) DT(D8):DA(C13) DT(D9):DA(C12) DA(D10):DT(C11) DA(D12):DT(C9) DT(D13):DA(C8) DC(D14):DG(C7) DT(D15):DA(C6) DC(D16):DG(C5) DG(D17):DC(C4) DG(D19):DC(C2) chainA ( 18) GLN53 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER63 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 30) ALA65 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 ( 31) ARG66 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 33) SER68 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) LYS69 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 chainB ( 28) SER63 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 29) GLN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 30) ALA65 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 ( 31) ARG66 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 ( 33) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 34) LYS69 0 0 0 0 0 0 0 0 0 1 6 6 0 0 0 prot.sequence vlahrlaeirkalgharQadvaalmgvSqARvSKlesgdlshtelgtlqayvaalgghlrivaefgentveltalehh/vlahrlaeirkalgharqadvaalmgvSQARvSKlesgdlshtelgtlqayvaalgghlrivaefgentveltalehh >6lty_B:lambda_repressor-like_DNA-binding_domains; title=DNA BOUND ANTITOXIN HIGA3 organism=Mycobacterium tuberculosis H37Rv DNA sequence DC(D1):DG(C20) DT(D2):DG(C18) DT(D4):DA(C17) DA(D5):DT(C16) DG(D7):DC(C15) DT(D8):DA(C13) DT(D9):DA(C12) DA(D10):DT(C11) DA(D12):DT(C9) DT(D13):DA(C8) DC(D14):DG(C7) DT(D15):DA(C6) DC(D16):DG(C5) DG(D17):DC(C4) DG(D19):DC(C2) chainB ( 28) SER63 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 29) GLN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ( 30) ALA65 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 ( 31) ARG66 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 ( 33) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 34) LYS69 0 0 0 0 0 0 0 0 0 1 6 6 0 0 0 prot.sequence vlahrlaeirkalgharqadvaalmgvSQARvSKlesgdlshtelgtlqayvaalgghlrivaefgentveltalehh >6lu0_A: title=CRYSTAL STRUCTURE OF CAS12I2 TERNARY COMPLEX WITH 12 NT SPACER organism=UNIDENTIFIED DNA sequence DG(C13):DC(D9) DA(C14):DT(D8) DA(C15):DT(D7) DA(C16):DT(D6) DG(C17):DC(D5) DC(C18):DG(D4) DG(C19):DC(D3) DG(C20):DC(D2) DC(C21):DG(D1) chainA (164) GLN163 16 0 0 0 0 0 0 0 0 (165) ASN164 27 0 0 0 0 0 0 0 0 (167) SER166 3 0 0 0 0 0 0 0 0 (170) SER169 0 2 4 0 0 0 0 0 0 (233) ALA232 0 4 4 0 0 0 0 0 0 (290) LEU289 0 0 1 0 0 0 0 0 0 prot.sequence smssaiksyksvlrpnerknqllkstiqcledgsafffkmlqglfggitpeivrfsteqekqqqdialwcavnwfrpvsqdslthtiasdnlvekfeeyyggtasdaikqyfsasigesyywndcrqqyydlcrelgvevsdlthdleilcrekclavatesnQNnSiiSvlfgtgekedrsvklritkkileaisnlkeipknvapiqeiilnvakatketfrqvyagnlgApstlekfiakdgqkefdlkklqtdlkkvirgkskerdwccqeelrsyveqntiqydLwawgemfnkahtalkikstrnynfakqrleqfkeiqslnnllvvkklndcsaqdilaaakynqqldryksqkanpsvlgnqgftwtnavilpekaqrndrpnsldlriwlylklrhpdgrwkkhhipfydtrffqeiyaagnspvdtcqfrtprfgyhlpkltdqtairvnkkhvkaaktearirlaiqqgtlpvsnlkiteisatinskgqvripvkfdvgrqkgtlqigdrfcgydqnqtashayslwevvkegqyhkelgcfvrfissgdivsitenrgnqfdqlsyeglaypqyadwrkkaskfvslwqitvtveakekfdaickyqprlykfnkeyayllrdivrgkslvelqqirqeifrfieqdcgvtrlgslslstletvkavkgiiysyfstalnasknnpisdeqrkefdpelfalleklelirtrkkkqkveriansliqtclennikfirgagdsmdwlargvfnkirqlapmhnitlfgcgslytshqdplvhrnpdkamkcrwaaipvkdigdwvlrklsqnlraknigtgeyyhqgvkeflshyelqdleeellkwrsdrksnipcwvlqnrlaeklgnkeavvyipvrggriyfathkvatgavsivfdqkqvwvcnadhvaaanialtvk >6lui_A: title=CRYSTAL STRUCTURE OF THE SAMD1 WH DOMAIN AND DNA COMPLEX organism=HOMO SAPIENS DNA sequence DA(C1):DT(B13) DT(C2):DA(B12) DG(C3):DC(B11) DG(C4):DC(B10) DT(C5):DA(B9) DG(C6):DC(B8) DC(C7):DG(B7) DG(C8):DC(B6) DC(C9):DG(B5) DA(C10):DT(B4) DG(C11):DC(B3) DG(C12):DC(B2) DT(C13):DA(B1) chainA ( 16) ARG43 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 18) ARG45 0 0 0 0 0 0 0 0 2 11 0 0 0 ( 19) LYS46 0 0 0 0 0 17 13 10 0 0 0 0 0 ( 60) TYR87 0 0 1 5 0 0 0 0 0 0 0 0 0 ( 61) LYS88 0 0 0 5 3 0 0 0 0 0 0 0 0 prot.sequence sphyqewildtidslRsRKarpdlericrmvrrrhgpepertraelekliqqravlrvsYKgsisyrnaar >6lwa_G:S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain;N-terminal_domain_of_MutM-like_DNA_repair_proteins; title=CRYSTAL STRUCTURE OF HUMAN NEIL1(P2G, E3Q, K242) BOUND TO DUPLEX DNA CONTAINING 5-HYDROXYURACIL (5-OHU) organism=Homo sapiens DNA sequence DC(H1):DG(I12) DG(H2):DC(I11) DT(H3):DA(I10) DC(H4):DG(I9) DC(H5):DG(I8) DA(H6):DT(I7) DG(H8):DC(I6) DT(H9):DC(I5) DC(H10):DA(I4) DT(H11):DG(I3) DA(H12):DA(I2) DC(H13):DT(I1) chainG ( 55) MET81 0 0 0 0 0 0 4 0 0 0 0 0 ( 86) ILE117 0 0 0 0 0 1 0 0 0 0 0 0 ( 87) ARG118 0 0 0 0 0 44 14 0 0 0 0 0 ( 89) PHE120 0 0 0 0 0 0 35 15 0 0 0 0 (215) ARG277 0 0 0 0 0 0 4 0 0 0 0 0 prot.sequence gqgpelhlasqfvneacvekssvsrnpevpfyrisasargkelrlilspvfrfgMsgsfqlvprlprhahlrfytappgalcfvdIRrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignylraeilyrlkippfekarsvlealpdllelchsvpkevvqleedfaafrawlrcygmpgmsslqdrhgRtiwfqgdpgpla >6lwc_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN NEIL1(P2G, E3Q, K242) BOUND TO DUPLEX DNA CONTAINING SPIROIMINODIHYDANTOIN (SP) organism=Homo sapiens DNA sequence DC(B1):DG(C12) DG(B2):DC(C11) DT(B3):DA(C10) DC(B4):DG(C9) DC(B5):DG(C8) DA(B6):DT(C7) DG(B8):DC(C6) DT(B9):DC(C5) DC(B10):DA(C4) DT(B11):DG(C3) DA(B12):DA(C2) DC(B13):DT(C1) chainA ( 80) MET81 0 0 0 0 0 0 5 0 0 0 0 0 (117) ARG118 0 0 0 0 0 35 18 0 0 0 0 0 (119) PHE120 0 0 0 0 0 0 28 17 0 0 0 0 (252) ARG277 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence gqgpelhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlilsplpgaqpqqeplalvfrfgMsgsfqlvpreelprhahlrfytappgprlalcfvdiRrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignylraeilyrlkippfekarsvlealqnpdllelchsvpkevvqlggkgyeedfaafrawlrcygmpgmsslqdrhgRtiwfqgdpgplap >6lwd_D:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN NEIL1(P2G, E3Q, R242) BOUND TO DUPLEX DNA CONTAINING SPIROIMINODIHYDANTOIN (SP) organism=Homo sapiens DNA sequence DT(F1):DA(E12) DA(F2):DT(E11) DG(F3):DC(E10) DA(F4):DT(E9) DC(F5):DG(E8) DC(F6):DA(E6) DT(F7):DC(E5) DG(F8):DC(E4) DG(F9):DT(E3) DA(F10):DG(E2) DC(F11):DC(E1) chainD ( 80) MET81 0 0 0 0 5 0 0 0 0 0 0 (117) ARG118 0 0 0 0 0 44 12 0 0 0 0 (119) PHE120 0 0 0 0 42 15 0 0 0 0 0 (251) ARG277 0 0 0 0 3 0 0 0 0 0 0 prot.sequence gqgpelhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlilsplpgaqpqqeplalvfrfgMsgsfqlvpreelprhahlrfytappgprlalcfvdiRrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignylraeilyrlkippfekarsvlealqpdllelchsvpkevvqlggrgyeedfaafrawlrcygmpgmsslqdrhgRtiwfqgdpgplap >6lwf_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN NEIL1(P2G, E3Q, K242) BOUND TO DUPLEX DNA CONTAINING GUANIDINOHYDANTOIN (GH) organism=Homo sapiens DNA sequence DT(C1):DA(B12) DA(C2):DT(B11) DG(C3):DC(B10) DA(C4):DT(B9) DC(C5):DG(B8) DC(C6):8Y9(B7) DT(C7):DA(B6) DG(C8):DC(B5) DG(C9):DC(B4) DA(C10):DT(B3) DC(C11):DG(B2) DG(C12):DC(B1) chainA ( 2) GLN3 0 0 0 0 0 3 0 0 0 0 0 0 ( 5) GLU6 0 0 0 0 0 11 0 0 0 0 0 0 ( 80) MET81 0 0 0 0 10 0 0 0 0 0 0 0 (116) ILE117 0 0 0 0 0 0 1 0 0 0 0 0 (117) ARG118 0 0 0 0 0 17 39 0 0 0 0 0 (119) PHE120 0 0 0 0 70 12 0 0 0 0 0 0 (176) TYR177 0 0 0 0 0 3 0 0 0 0 0 0 (222) LYS242 0 0 0 0 0 4 0 0 0 0 0 0 (254) ARG277 0 0 0 0 14 0 0 0 0 0 0 0 prot.sequence gqgpelhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlilsplpgaqpqqeplalvfrfgMsgsfqlvpreelprhahlrfytappgprlalcfvdIRrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignylraeilyrlkippfekarsvlealqnpdllelchsvpkevvqlggkgygseedfaafrawlrcygmpgmsslqdrhgRtiwfqgdpgpla >6lwg_D:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN NEIL1(P2G, E3Q, R242) BOUND TO DUPLEX DNA CONTAINING GUANIDINOHYDANTOIN (GH) organism=Homo sapiens DNA sequence DC(E1):DG(F12) DG(E2):DC(F11) DT(E3):DA(F10) DC(E4):DG(F9) DC(E5):DG(F8) DA(E6):DT(F7) 8Y9(E7):DC(F6) DG(E8):DC(F5) DT(E9):DA(F4) DC(E10):DG(F3) DT(E11):DA(F2) DA(E12):DT(F1) chainD ( 2) GLN3 0 0 0 0 0 0 1 0 0 0 0 0 ( 5) GLU6 0 0 0 0 0 0 8 0 0 0 0 0 ( 80) MET81 0 0 0 0 0 0 1 5 0 0 0 0 (117) ARG118 0 0 0 0 0 84 15 0 0 0 0 0 (119) PHE120 0 0 0 0 0 0 13 41 0 0 0 0 (176) TYR177 0 0 0 0 0 0 1 0 0 0 0 0 (221) ARG242 0 0 0 0 0 0 6 0 0 0 0 0 (249) ARG277 0 0 0 0 0 0 0 5 0 0 0 0 prot.sequence gqgpelhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlilsplpgaqpqqeplalvfrfgMsgsfqlvpreelprhahlrfytappgprlalcfvdiRrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignylraeilyrlkippfekarsvlealnpdllelchsvpkevvqlggrgydfaafrawlrcygmpgmsslqdrhgRtiwfqgdpgplap >6lwj_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN NEIL1(P2G, E3Q, K242) BOUND TO DUPLEX DNA CONTAINING DIHYDROURACIL (DHU) organism=Homo sapiens DNA sequence DT(C1):DA(B12) DA(C2):DT(B11) DG(C3):DC(B10) DA(C4):DT(B9) DC(C5):DG(B8) DC(C6):DA(B6) DT(C7):DC(B5) DG(C8):DC(B4) DG(C9):DT(B3) DA(C10):DG(B2) DC(C11):DC(B1) chainA ( 80) MET81 0 0 0 0 3 0 0 0 0 0 0 (117) ARG118 0 0 0 0 0 42 13 0 0 0 0 (119) PHE120 0 0 0 0 33 11 0 0 0 0 0 (253) ARG277 0 0 0 0 5 0 0 0 0 0 0 prot.sequence gqgpelhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlilsplpgaqpqqeplalvfrfgMsgsfqlvpreelprhahlrfytappgprlalcfvdiRrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignylraeilyrlkippfekarsvlealqnpdllelchsvpkevvqlggkgygeedfaafrawlrcygmpgmsslqdrhgRtiwfqgdpgplap >6lwk_G:S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain;N-terminal_domain_of_MutM-like_DNA_repair_proteins; title=CRYSTAL STRUCTURE OF HUMAN NEIL1(P2G, E3Q, R242) BOUND TO DUPLEX DNA CONTAINING DIHYDROURACIL (DHU) organism=Homo sapiens DNA sequence DC(H1):DG(I12) DG(H2):DC(I11) DT(H3):DA(I10) DC(H4):DG(I9) DC(H5):DG(I8) DA(H6):DT(I7) DG(H8):DC(I6) DT(H9):DC(I5) DC(H10):DA(I4) DT(H11):DG(I3) DA(H12):DA(I2) DC(H13):DT(I1) chainG ( 63) MET81 0 0 0 0 0 0 5 0 0 0 0 0 ( 93) ILE117 0 0 0 0 0 1 0 0 0 0 0 0 ( 94) ARG118 0 0 0 0 0 43 16 0 0 0 0 0 ( 96) PHE120 0 0 0 0 0 0 27 15 0 0 0 0 (220) ARG277 0 0 0 0 0 0 7 0 0 0 0 0 prot.sequence gqgpelhlasqfvneaggcvekssvsrnpevpfisasargkelrlilsppqqeplalvfrfgMsgsfqlvprlprhahlrfytappalcfvdIRrFgrwdlggkwqpgrgpcvlqeyqqfrenadkafdrpicealldqrffngignylraeilyrlkippfekarsvlealqnpdllelchsvpkevvqlgeedfaafrawlrcygmpgmsslqdrhgRtiwfqgdpgpla >6lwm_D:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN NEIL1(K242) BOUND TO DUPLEX DNA CONTAINING 2'-FLUORO-2'-DEOXY-5,6-DIHYDROURIDINE organism=Homo sapiens DNA sequence DT(F1):DA(E12) DA(F2):DT(E11) DG(F3):DC(E10) DA(F4):DT(E9) DC(F5):DG(E8) DC(F6):DA(E6) DT(F7):DC(E5) DG(F8):DC(E4) DG(F9):DT(E3) DA(F10):DG(E2) DC(F11):DC(E1) chainD ( 80) MET81 0 0 0 0 5 0 0 0 0 0 0 (117) ARG118 0 0 0 0 0 42 10 0 0 0 0 (119) PHE120 0 0 0 0 49 12 0 0 0 0 0 (248) ARG277 0 0 0 0 8 0 0 0 0 0 0 prot.sequence pegpelhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlilsplpgaqpqqeplalvfrfgMsgsfqlvpreelprhahlrfytappgprlalcfvdiRrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignylraeilyrlkippfekarsvlealqnpdllelchsvpkevvqlggydfaafrawlrcygmpgmsslqdrhgRtiwfqgdpgplap >6lwo_G:S13-like_H2TH_domain;N-terminal_domain_of_MutM-like_DNA_repair_proteins;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN NEIL1(R242, Y244H) BOUND TO DUPLEX DNA CONTAINING 2'-FLUORO-2'-DEOXY-5,6-DIHYDROURIDINE organism=Homo sapiens DNA sequence DT(I1):DA(H12) DA(I2):DT(H11) DG(I3):DC(H10) DA(I4):DT(H9) DC(I5):DG(H8) DC(I6):DA(H6) DT(I7):DC(H5) DG(I8):DC(H4) DG(I9):DT(H3) DA(I10):DG(H2) DC(I11):DC(H1) chainG ( 55) MET81 0 0 0 0 4 0 0 0 0 0 0 ( 85) ILE117 0 0 0 0 0 0 1 0 0 0 0 ( 86) ARG118 0 0 0 0 0 46 6 0 0 0 0 ( 88) PHE120 0 0 0 0 43 9 0 0 0 0 0 (211) ARG277 0 0 0 1 7 0 0 0 0 0 0 prot.sequence pegpelhlasqfvneacrvekssvsrnpevpfesisasargkelrlilsvfrfgMsgsfqlvpreelprhahlrfytaalcfvdIRrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignylraeilyrlkippfekarsvlealpdllelchsvpkevvqldfaafrawlrcympgmsslqdrhgRtiwfqgdpgpla >6lwq_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN NEIL1(R242) BOUND TO DUPLEX DNA CONTAINING A C:T MISMATCH organism=Homo sapiens DNA sequence DC(B1):DG(C12) DG(B2):DC(C11) DT(B3):DA(C10) DC(B4):DG(C9) DC(B5):DG(C8) DA(B6):DT(C7) DT(B7):DC(C6) DG(B8):DC(C5) DT(B9):DA(C4) DC(B10):DG(C3) DT(B11):DA(C2) DA(B12):DT(C1) DC(B13):DG(I13) DC(H1):DG(I12) DG(H2):DC(I11) DT(H3):DA(I10) DC(H4):DG(I9) DC(H5):DG(I8) DA(H6):DT(I7) DT(H7):DC(I6) DG(H8):DC(I5) DT(H9):DA(I4) DC(H10):DG(I3) DT(H11):DA(I2) DA(H12):DT(I1) chainA ( 1) PRO2 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) GLU6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) MET81 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ARG118 0 0 0 0 0 60 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) PHE120 0 0 0 0 0 0 11 45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) TYR177 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) TYR244 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) ARG274 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) HIS275 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG277 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence PegpElhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlilsplpgaqpqqeplalvfrfgMsgsfqlvpreelprhahlrfytappgprlalcfvdiRrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignYlraeilyrlkippfekarsvlealqnpdllelchsvpkevvqlggrgYgsesgeedfaafrawlrcygmpgmsslqdRHgRtiwfqgdpgplap >6lwr_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN NEIL1(K242) BOUND TO DUPLEX DNA CONTAINING A CLEAVED C:T MISMATCH organism=Homo sapiens DNA sequence DT(D1):DA(C12) DA(D2):DT(C11) DG(D3):DC(C10) DA(D4):DT(C9) DC(D5):DG(C8) chainA ( 80) MET81 0 0 0 0 9 (119) PHE120 0 0 0 0 35 (255) HIS275 0 4 0 0 0 (257) ARG277 0 0 0 2 5 prot.sequence pegpelhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlilsplpgaqpqqeplalvfrfgMsgsfqlvpreelprhahlrfytappgprlalcfvdirrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignylraeilyrlkippfekarsvlealqnpdllelchsvpkevvqlggkgygsesgeedfaafrawlrcygmpgmsslqdrHgRtiwfqgdpgplap >6lxn_A:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF C-TERMINAL DNA-BINDING DOMAIN OF ESCHERICHIA COLI OMPR IN COMPLEX WITH F1-DNA organism=Escherichia coli DNA sequence DA(D1):DT(C26) DA(D2):DT(C25) DA(D3):DT(C24) DA(D4):DT(C23) DT(D5):DA(C22) DA(D6):DT(C21) DT(D7):DA(C20) DG(D8):DC(C19) DT(D9):DA(C18) DA(D10):DT(C17) DA(D11):DT(C16) DC(D12):DG(C15) DC(D13):DG(C14) DA(D14):DT(C13) DA(D15):DT(C12) DA(D16):DT(C11) DA(D17):DT(C10) DG(D18):DC(C9) DT(D19):DA(C8) DA(D20):DT(C7) DA(D21):DT(C6) DA(D22):DT(C5) DA(D23):DT(C4) DT(D24):DA(C3) DT(D25):DA(C2) DT(D26):DA(C1) chainA ( 64) ARG65 0 0 0 0 0 0 17 12 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ASP68 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL69 0 0 0 0 0 0 0 0 4 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) SER72 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG73 0 0 0 0 0 0 0 0 0 0 1 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) TRP92 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aviafgkfklnlgtremfredepmpltsgefavlkalvshpreplsrdklmnlargreysameRsiDVqiSRlrrmveedpahpryiqtvWglgyvfvpdgskalehhhh >6lxn_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF C-TERMINAL DNA-BINDING DOMAIN OF ESCHERICHIA COLI OMPR IN COMPLEX WITH F1-DNA organism=Escherichia coli DNA sequence DA(C1):DT(D26) DA(C2):DT(D25) DA(C3):DT(D24) DT(C4):DA(D23) DT(C5):DA(D22) DT(C6):DA(D21) DT(C7):DA(D20) DA(C8):DT(D19) DC(C9):DG(D18) DT(C10):DA(D17) DT(C11):DA(D16) DT(C12):DA(D15) DT(C13):DA(D14) DG(C14):DC(D13) DG(C15):DC(D12) DT(C16):DA(D11) DT(C17):DA(D10) DA(C18):DT(D9) DC(C19):DG(D8) DA(C20):DT(D7) DT(C21):DA(D6) DA(C22):DT(D5) DT(C23):DA(D4) DT(C24):DA(D3) DT(C25):DA(D2) DT(C26):DA(D1) chainA ( 64) ARG65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 12 17 0 0 0 0 0 0 ( 67) ASP68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 68) VAL69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 4 0 0 0 0 0 0 0 0 ( 71) SER72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 72) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 1 0 0 0 0 0 0 0 0 0 0 ( 91) TRP92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainB ( 64) ARG65 0 0 0 0 0 0 0 10 14 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER66 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ASP68 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL69 0 0 0 0 1 7 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) GLN70 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) TRP92 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aviafgkfklnlgtremfredepmpltsgefavlkalvshpreplsrdklmnlargreysameRsiDVqiSRlrrmveedpahpryiqtvWglgyvfvpdgskalehhhh/aviafgkfklnlgtremfredepmpltsgefavlkalvshpreplsrdklmnlargreysameRSiDVQisrlrrmveedpahpryiqtvWglgyvfvpdg >6m0v_A: title=CRSYTAL STRUCTURE OF STREPTOCOCCUS THERMOPHILUS CAS9 IN COMPLEX WITH THE GGAA PAM organism=Streptococcus thermophilus LMD-9 DNA sequence DG(C1):DC(D8) DC(C2):DG(D7) DT(C3):DA(D6) DT(C4):DA(D5) DC(C5):DG(D4) DC(C6):DG(D3) DT(C7):DA(D2) DT(C8):DA(D1) chainA (632) PHE673 0 0 0 0 0 0 0 51 (870) SER961 0 0 0 0 0 1 0 0 (958) MET1049 0 0 5 3 4 0 0 0 (961) GLN1052 8 9 0 0 0 0 0 0 (964) TYR1055 0 6 4 0 0 0 0 0 (989) ALA1080 0 0 0 1 0 0 0 0 (991) SER1082 0 0 0 1 1 0 0 0 (993) GLN1084 0 0 0 0 9 7 5 0 (995) LYS1086 0 0 1 3 10 3 0 0 prot.sequence mgsdlvlgldigigsvgvgilnkvtgeiihknsrifpaaqaennlvrrtnrqgrrlarrkkhrrvrlnrlfeesglitdftkisinlnpyqlrvkgltdelsneelfialknmvkhrgisyktpgqiqleryqtygqlrgdftvekdgkkhrlinvfptsayrsealrilqtqqefnpqitdefinryleiltgkrkyyhgpgneksrtdygryrtsgetldnifgiligkctfypdefraakasytaqefnllndlnnltvptetkklskeqknqiinyvknekamgpaklfkyiaklldvadikgyridksgkaeihtfeayrkmktletldieqmdretldklayvltlnteregiqealehefadgsfsqkqvdelvqfrkanssifgkgwhnfsvklmmelipelyetseeqmtiltrlgyidekllteeiynpvvaksvrqaikivnaaikeygdfdniviemaretneddekkaiqkiqkankdekdaamlkaanqyngkaelphsvfhghkqlatkirlwhqqgerclytgktisihdlinnsnqfevdailplsitfddslankvlvyatanqekgqrtpyqaldsmddawsfrelkafvresktlsnkkkeyllteediskFdviernlvdtryasrvvlnalqehfrahkidtkvsvvrgqftsqlrrhwgiektrdtyhhhavdaliiaassqlnlyqhfvdtlkskefedsilfsyqvdskfnrkisdatiyatrqakvgkdkadetyvlgkikdiytqdgydafmkiykkdkskflmyrhdpqtfekviepilenypnkvpcnpflkykeehgyirkyskkgngpeikslkyydsklgnhiditpkdsnnkvvlqSvspwradvyfnkttgkyeilglkyadlqfekgtgtykisqekyndikkkegvdsdsefkftlykndlllvkdtetkeqqlfrflsrtMpkQkhYvelkpydkqkfeggealikvlgnvAnSgQcKkglgksnisiykvrtdvlgnqhiiknegdkpkldf >6m0w_A: title=CRYSTAL STRUCTURE OF STREPTOCOCCUS THERMOPHILUS CAS9 IN COMPLEX WITH THE AGAA PAM organism=Streptococcus thermophilus LMD-9 DNA sequence DA(D1):DT(C8) DA(D2):DT(C7) DA(D3):DT(C6) DG(D4):DC(C5) DA(D5):DT(C4) DA(D6):DT(C3) DG(D7):DC(C2) DC(D8):DG(C1) chainA (632) PHE673 51 0 0 0 0 0 0 0 (959) THR1048 0 0 0 2 0 0 0 0 (960) MET1049 0 0 0 5 3 4 0 0 (963) GLN1052 0 0 0 0 0 0 6 7 (966) TYR1055 0 0 0 0 0 2 5 0 (991) ALA1080 0 0 0 0 1 0 0 0 (993) SER1082 0 0 0 2 6 0 0 0 (995) GLN1084 0 11 10 8 0 0 0 0 (997) LYS1086 0 0 2 11 4 1 0 0 prot.sequence mgsdlvlgldigigsvgvgilnkvtgeiihknsrifpaaqaennlvrrtnrqgrrlarrkkhrrvrlnrlfeesglitdftkisinlnpyqlrvkgltdelsneelfialknmvkhrgisyktpgqiqleryqtygqlrgdftvekdgkkhrlinvfptsayrsealrilqtqqefnpqitdefinryleiltgkrkyyhgpgneksrtdygryrtsgetldnifgiligkctfypdefraakasytaqefnllndlnnltvptetkklskeqknqiinyvknekamgpaklfkyiaklldvadikgyridksgkaeihtfeayrkmktletldieqmdretldklayvltlnteregiqealehefadgsfsqkqvdelvqfrkanssifgkgwhnfsvklmmelipelyetseeqmtiltrlgyidekllteeiynpvvaksvrqaikivnaaikeygdfdniviemaretneddekkaiqkiqkankdekdaamlkaanqyngkaelphsvfhghkqlatkirlwhqqgerclytgktisihdlinnsnqfevdailplsitfddslankvlvyatanqekgqrtpyqaldsmddawsfrelkafvresktlsnkkkeyllteediskFdviernlvdtryasrvvlnalqehfrahkidtkvsvvrgqftsqlrrhwgiektrdtyhhhavdaliiaassqlnlapyqhfvdtlkskefedsilfsyqvdskfnrkisDatiyatrqakvgkdkadetyvlgkikdiytqdgydafmkiykkdkskflmyrhdpqtfekviepilenypnkvpcnpflkykeehgyirkyskkgngpeikslkyydsklgnhiditpkdsnnkvvlqsvspwradvyfnkttgkyeilglkyadlqfekgtgtykisqekyndikkkegvdsdsefkftlykndlllvkdtetkeqqlfrflsrTMpkQkhYvelkpydkqkfeggealikvlgnvAnSgQcKkglgksnisiykvrtdvlgnqhiiknegdkpkldf >6m0x_A: title=CRYSTAL STRUCTURE OF STREPTOCOCCUS THERMOPHILUS CAS9 IN COMPLEX WITH AGGA PAM organism=Streptococcus thermophilus LMD-9 DNA sequence DA(D1):DT(C8) DA(D2):DT(C7) DA(D3):DT(C6) DG(D4):DC(C5) DG(D5):DC(C4) DA(D6):DT(C3) DG(D7):DC(C2) DC(D8):DG(C1) chainA (625) PHE673 52 0 0 0 0 0 0 0 (959) THR1048 0 0 0 2 0 0 0 0 (960) MET1049 0 0 0 4 2 6 0 0 (963) GLN1052 0 0 0 0 0 0 6 7 (966) TYR1055 0 0 0 0 0 1 2 0 (993) SER1082 0 0 0 2 3 0 0 0 (995) GLN1084 0 13 11 3 0 0 0 0 (997) LYS1086 0 0 5 7 1 0 0 0 prot.sequence lvlgldigigsvgvgilnkvtgeiihknsrifpaaqaennlvrrtnrqgrrlarrkkhrrvrlnrlfeesglitdftkisinlnpyqlrvkgltdelsneelfialknmvkhrgisyktpgqiqleryqtygqlrgdftvekdgkkhrlinvfptsayrsealrilqtqqefnpqitdefinryleiltgkrkyyhgpgneksrtdygryrtsgetldnifgiligkctfypdefraakasytaqefnllndlnnltvptklskeqknqiinyvknekamgpaklfkyiaklldvadikgyridksgkaeihtfeayrkmktletldieqmdretldklayvltlnteregiqealehefadgsfsqkqvdelvqfrkanssifgkgwhnfsvklmmelipelyetseeqmtiltrlgyidekllteeiynpvvaksvrqaikivnaaikeygdfdniviemaretneddekkaiqkiqkankdekdaamlkaanqyngkaelphsvfhghkqlatkirlwhqqgerclytgktisihdlinnsnqfevdailplsitfddslankvlvyatanqekgqrtpyqaldsmddawsfrelkafvresktlsnkkkeyllteediskFdviernlvdtryasrvvlnalqehfrahkidtkvsvvrgqftsqlrrhwgiektrdtyhhhavdaliiaassqlnlpyqhfvdtlkskefedsilfsyqvdskfnrkisDatiyatrqakvgkdkadetyvlgkikdiytqdgydafmkiykkdkskflmyrhdpqtfekviepilenypnkqinekgkevpcnpflkykeehgyirkyskkgngpeikslkyydsklgnhiditpkdsnnkvvlqSvspwradvyfnkttgkyeilglkyadlqfekgtgtykisqekyndikkkegvdsdsefkftlykndlllvkdtetkeqqlfrflsrTMpkQkhYvelkpydkqkfeggealikvlgnvanSgQcKkglgksnisiykvrtdvlgnqhiiknegdkpkldf >6m2v_AB:PUA_domain-like; title=CRYSTAL STRUCTURE OF UHRF1 SRA COMPLEXED WITH FULLY-MCHG DNA. organism=Mus musculus DNA sequence DT(C1):DA(D13) DC(C2):DG(D12) DA(C3):DT(D11) DC(C4):DG(D10) DG(C5):DC(D9) DT(C7):DT(D7) DC(C9):DG(D5) DG(C10):DC(D4) DT(C11):DA(D3) DG(C12):DC(D2) DA(C13):DT(D1) chainB ( 35) VAL451 0 0 0 0 0 2 6 0 0 0 0 chainA ( 34) HIS450 0 0 0 0 2 0 0 0 0 0 0 ( 35) VAL451 0 0 0 0 10 3 0 0 0 0 0 prot.sequence ivpanhfgpipgvpvgtmwrfrvqvsesgvhrpHVagihgrsndgayslvlaggyeddvdngnyftytgsgssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywperflvwryllrrddtepepwtregkdrtrqlgltmqypegylealankeks/ivpanhfgpipgvpvgtmwrfrvqvsesgvhrphVagihgrsndgayslvlaggyeddvdngnyftytgsggssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywpersgflvwryllrrddtepepwtregkdrtrqlgltmqypegylealankeksr >6m2v_B:PUA_domain-like; title=CRYSTAL STRUCTURE OF UHRF1 SRA COMPLEXED WITH FULLY-MCHG DNA. organism=Mus musculus DNA sequence DT(C1):DA(D13) DC(C2):DG(D12) DA(C3):DT(D11) DC(C4):DG(D10) DG(C5):DC(D9) DT(C7):DT(D7) DC(C9):DG(D5) DG(C10):DC(D4) DT(C11):DA(D3) DG(C12):DC(D2) DA(C13):DT(D1) chainB ( 35) VAL451 0 0 0 0 0 2 6 0 0 0 0 prot.sequence ivpanhfgpipgvpvgtmwrfrvqvsesgvhrphVagihgrsndgayslvlaggyeddvdngnyftytgsggssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywpersgflvwryllrrddtepepwtregkdrtrqlgltmqypegylealankeksr >6m3d_C:Homeodomain-like; title=X-RAY CRYSTAL STRUCTURE OF TANDEMLY CONNECTED ENGRAILED HOMEODOMAINS (EHD) WITH R53A MUTATIONS AND DNA COMPLEX organism=DROSOPHILA MELANOGASTER DNA sequence DG(B1):DC(A12) DG(B2):DC(A11) DA(B3):DT(A10) DT(B4):DA(A9) DT(B5):DA(A8) DA(B6):DT(A7) DG(B7):DC(A6) DG(B8):DC(A5) DA(B9):DT(A4) DT(B10):DA(A3) DT(B11):DA(A2) DA(B12):DT(A1) chainC ( 51) ARG90 0 0 0 7 6 0 0 0 0 0 0 0 ( 53) ARG92 0 0 0 0 8 8 15 0 0 0 0 0 ( 95) ILE134 0 0 3 2 0 0 0 0 0 0 0 0 ( 98) LYS137 11 9 3 0 0 0 0 0 0 0 0 0 ( 99) ASN138 0 0 0 11 8 0 0 0 0 0 0 0 prot.sequence rtafsseqlarlkrefnenrylterrrqqlsselglneaqikiwfknkaaRpRtafsseqlarlkrefnenrylterrrqqlsselglneaqikIwfKNkaakikksg >6m3l_A:Transglycosidases; title=CRYSTAL STRUCTURE OF THE R.PABI(Y68F-K154A)-DSDNA(NONSPECIFIC) COMPLEX organism=Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) DNA sequence DT(C-7) DC(C-6) DG(C-5) DA(C-4) DT(C-3) DT(C-2) DC(C-1) DA(C0) DG(C1) DA(C2) DA(C3) DT(C4) chainA ( 21) THR28 0 0 4 0 0 0 0 0 0 0 0 0 prot.sequence easvsfengkivvrlpitrpTskirvkkiengvgipvstrkksfpsdenlrdyyiewqisfardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlkhaqgyqsmvyvcipltnvepslagrvarrnevvkyevpvdlmkellkafiiasethkndivkflrsii >6m3l_AB:Transglycosidases; title=CRYSTAL STRUCTURE OF THE R.PABI(Y68F-K154A)-DSDNA(NONSPECIFIC) COMPLEX organism=Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) DNA sequence DT(C-7) DC(C-6) DG(C-5) DA(C-4) DT(C-3) DT(C-2) DC(C-1) DA(C0) DG(C1) DA(C2) DA(C3) DT(C4) chainA ( 21) THR28 0 0 4 0 0 0 0 0 0 0 0 0 chainB ( 2) THR28 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence easvsfengkivvrlpitrpTskirvkkiengvgipvstrkksfpsdenlrdyyiewqisfardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlkhaqgyqsmvyvcipltnvepslagrvarrnevvkyevpvdlmkellkafiiasethkndivkflrsii/pTskirvkkiengvdenlrdyyiewqisfardgkydyelsrmvrlahehgiltyndiyellkfaddvksyledkgirrestneelygfniyedvypvakkelpsgefigivlkhaqravgyqsmvyvcipltnevpvdlmkellkafiiasethkndivkflrsi >6m3v_O:Histone-fold; title=355 BP DI-NUCLEOSOME HARBORING COHESIVE DNA TERMINI organism=HOMO SAPIENS DNA sequence DC(I1):DG(J351) DG(I2):DC(J350) DC(I3):DG(J349) DT(I4):DA(J348) DG(I5):DC(J347) DA(I6):DT(J346) DC(I7):DG(J345) DG(I8):DC(J344) DA(I9):DT(J343) DA(I10):DT(J342) DA(I11):DT(J341) DA(I12):DT(J340) DA(I13):DT(J339) DA(I14):DT(J338) DA(I15):DT(J337) DA(I16):DT(J336) DA(I17):DT(J335) DA(I18):DT(J334) DC(I19):DG(J333) DG(I20):DC(J332) DC(I21):DG(J331) DA(I22):DT(J330) DT(I23):DA(J329) DC(I24):DG(J328) DC(I25):DG(J327) DC(I26):DG(J326) DG(I27):DC(J325) DG(I28):DC(J324) DT(I29):DA(J323) DG(I30):DC(J322) DC(I31):DG(J321) DC(I32):DG(J320) DG(I33):DC(J319) DA(I34):DT(J318) DG(I35):DC(J317) DG(I36):DC(J316) DC(I37):DG(J315) DC(I38):DG(J314) DG(I39):DC(J313) DC(I40):DG(J312) DT(I41):DA(J311) DC(I42):DG(J310) DA(I43):DT(J309) DA(I44):DT(J308) DT(I45):DA(J307) DT(I46):DA(J306) DG(I47):DC(J305) DG(I48):DC(J304) DT(I49):DA(J303) DC(I50):DG(J302) DG(I51):DC(J301) DT(I52):DA(J300) DA(I53):DT(J299) DG(I54):DC(J298) DA(I55):DT(J297) DC(I56):DG(J296) DA(I57):DT(J295) DG(I58):DC(J294) DC(I59):DG(J293) DT(I60):DA(J292) DC(I61):DG(J291) DT(I62):DA(J290) DA(I63):DT(J289) DG(I64):DC(J288) DC(I65):DG(J287) DA(I66):DT(J286) DC(I67):DG(J285) DC(I68):DG(J284) DG(I69):DC(J283) DC(I70):DG(J282) DT(I71):DA(J281) DT(I72):DA(J280) DA(I73):DT(J279) DA(I74):DT(J278) DA(I75):DT(J277) DC(I76):DG(J276) DG(I77):DC(J275) DC(I78):DG(J274) DA(I79):DT(J273) DC(I80):DG(J272) DG(I81):DC(J271) DT(I82):DA(J270) DA(I83):DT(J269) DC(I84):DG(J268) DG(I85):DC(J267) DC(I86):DG(J266) DG(I87):DC(J265) DC(I88):DG(J264) DT(I89):DA(J263) DG(I90):DC(J262) DT(I91):DA(J261) DC(I92):DG(J260) DT(I93):DA(J259) DA(I94):DT(J258) DC(I95):DG(J257) DC(I96):DG(J256) DG(I97):DC(J255) DC(I98):DG(J254) DG(I99):DC(J253) DT(I100):DA(J252) DT(I101):DA(J251) DT(I102):DA(J250) DT(I103):DA(J249) DA(I104):DT(J248) DA(I105):DT(J247) DC(I106):DG(J246) DC(I107):DG(J245) DG(I108):DC(J244) DC(I109):DG(J243) DC(I110):DG(J242) DA(I111):DT(J241) DC(I112):DG(J240) DT(I113):DA(J239) DA(I114):DT(J238) DG(I115):DC(J237) DA(I116):DT(J236) DA(I117):DT(J235) DG(I118):DC(J234) DC(I119):DG(J233) DG(I120):DC(J232) DC(I121):DG(J231) DT(I122):DA(J230) DT(I123):DA(J229) DA(I124):DT(J228) DC(I125):DG(J227) DT(I126):DA(J226) DA(I127):DT(J225) DG(I128):DC(J224) DT(I129):DA(J223) DC(I130):DG(J222) DT(I131):DA(J221) DC(I132):DG(J220) DC(I133):DG(J219) DA(I134):DT(J218) DG(I135):DC(J217) DG(I136):DC(J216) DC(I137):DG(J215) DA(I138):DT(J214) DC(I139):DG(J213) DG(I140):DC(J212) DT(I141):DA(J211) DG(I142):DC(J210) DT(I143):DA(J209) DG(I144):DC(J208) DA(I145):DT(J207) DG(I146):DC(J206) DA(I147):DT(J205) DC(I148):DG(J204) DC(I149):DG(J203) DG(I150):DC(J202) DG(I151):DC(J201) DC(I152):DG(J200) DA(I153):DT(J199) DC(I154):DG(J198) DA(I155):DT(J197) DT(I156):DA(J196) DG(I157):DC(J195) DA(I158):DT(J194) DA(I159):DT(J193) DA(I160):DT(J192) DA(I161):DT(J191) DA(I162):DT(J190) DA(I163):DT(J189) DA(I164):DT(J188) DA(I165):DT(J187) DA(I166):DT(J186) DA(I167):DT(J185) DT(I168):DA(J184) DG(I169):DC(J183) DC(I170):DG(J182) DA(I171):DT(J181) DT(I172):DA(J180) DG(I173):DC(J179) DC(I174):DG(J178) DT(I175):DA(J177) DC(I176):DG(J176) DG(I177):DC(J175) DA(I178):DT(J174) DG(I179):DC(J173) DT(I180):DA(J172) DA(I181):DT(J171) DT(I182):DA(J170) DG(I183):DC(J169) DA(I184):DT(J168) DA(I185):DT(J167) DA(I186):DT(J166) DA(I187):DT(J165) DA(I188):DT(J164) DA(I189):DT(J163) DA(I190):DT(J162) DA(I191):DT(J161) DA(I192):DT(J160) DA(I193):DT(J159) DT(I194):DA(J158) DC(I195):DG(J157) DG(I196):DC(J156) DC(I197):DG(J155) DA(I198):DT(J154) DT(I199):DA(J153) DC(I200):DG(J152) DC(I201):DG(J151) DC(I202):DG(J150) DG(I203):DC(J149) DG(I204):DC(J148) DT(I205):DA(J147) DG(I206):DC(J146) DC(I207):DG(J145) DC(I208):DG(J144) DG(I209):DC(J143) DA(I210):DT(J142) DG(I211):DC(J141) DG(I212):DC(J140) DC(I213):DG(J139) DC(I214):DG(J138) DG(I215):DC(J137) DC(I216):DG(J136) DT(I217):DA(J135) DC(I218):DG(J134) DA(I219):DT(J133) DA(I220):DT(J132) DT(I221):DA(J131) DT(I222):DA(J130) DG(I223):DC(J129) DG(I224):DC(J128) DT(I225):DA(J127) DC(I226):DG(J126) DG(I227):DC(J125) DT(I228):DA(J124) DA(I229):DT(J123) DG(I230):DC(J122) DA(I231):DT(J121) DC(I232):DG(J120) DA(I233):DT(J119) DG(I234):DC(J118) DC(I235):DG(J117) DT(I236):DA(J116) DC(I237):DG(J115) DT(I238):DA(J114) DA(I239):DT(J113) DG(I240):DC(J112) DC(I241):DG(J111) DA(I242):DT(J110) DC(I243):DG(J109) DC(I244):DG(J108) DG(I245):DC(J107) DC(I246):DG(J106) DT(I247):DA(J105) DT(I248):DA(J104) DA(I249):DT(J103) DA(I250):DT(J102) DA(I251):DT(J101) DC(I252):DG(J100) DG(I253):DC(J99) DC(I254):DG(J98) DA(I255):DT(J97) DC(I256):DG(J96) DG(I257):DC(J95) DT(I258):DA(J94) DA(I259):DT(J93) DC(I260):DG(J92) DG(I261):DC(J91) DC(I262):DG(J90) DG(I263):DC(J89) DC(I264):DG(J88) DT(I265):DA(J87) DG(I266):DC(J86) DT(I267):DA(J85) DC(I268):DG(J84) DT(I269):DA(J83) DA(I270):DT(J82) DC(I271):DG(J81) DC(I272):DG(J80) DG(I273):DC(J79) DC(I274):DG(J78) DG(I275):DC(J77) DT(I276):DA(J76) DT(I277):DA(J75) DT(I278):DA(J74) DT(I279):DA(J73) DA(I280):DT(J72) DA(I281):DT(J71) DC(I282):DG(J70) DC(I283):DG(J69) DG(I284):DC(J68) DC(I285):DG(J67) DC(I286):DG(J66) DA(I287):DT(J65) DC(I288):DG(J64) DT(I289):DA(J63) DA(I290):DT(J62) DG(I291):DC(J61) DA(I292):DT(J60) DA(I293):DT(J59) DG(I294):DC(J58) DC(I295):DG(J57) DG(I296):DC(J56) DC(I297):DG(J55) DT(I298):DA(J54) DT(I299):DA(J53) DA(I300):DT(J52) DC(I301):DG(J51) DT(I302):DA(J50) DA(I303):DT(J49) DG(I304):DC(J48) DT(I305):DA(J47) DC(I306):DG(J46) DT(I307):DA(J45) DC(I308):DG(J44) DC(I309):DG(J43) DA(I310):DT(J42) DG(I311):DC(J41) DG(I312):DC(J40) DC(I313):DG(J39) DA(I314):DT(J38) DC(I315):DG(J37) DG(I316):DC(J36) DT(I317):DA(J35) DG(I318):DC(J34) DT(I319):DA(J33) DG(I320):DC(J32) DA(I321):DT(J31) DG(I322):DC(J30) DA(I323):DT(J29) DC(I324):DG(J28) DC(I325):DG(J27) DG(I326):DC(J26) DG(I327):DC(J25) DC(I328):DG(J24) DA(I329):DT(J23) DC(I330):DG(J22) DA(I331):DT(J21) DT(I332):DA(J20) DG(I333):DC(J19) DA(I334):DT(J18) DA(I335):DT(J17) DA(I336):DT(J16) DA(I337):DT(J15) DA(I338):DT(J14) DA(I339):DT(J13) DA(I340):DT(J12) DA(I341):DT(J11) DA(I342):DT(J10) DA(I343):DT(J9) DC(I344):DG(J8) DG(I345):DC(J7) DT(I346):DA(J6) DC(I347):DG(J5) DA(I348):DT(J4) DG(I349):DC(J3) DC(I350):DG(J2) DG(I351):DC(J1) chainO ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >6m44_O:Histone-fold; title=355 BP DI-NUCLEOSOME HARBORING COHESIVE DNA TERMINI (HIGH CRYOPROTECTANT) organism=HOMO SAPIENS DNA sequence DC(I1):DG(J351) DG(I2):DC(J350) DC(I3):DG(J349) DT(I4):DA(J348) DG(I5):DC(J347) DA(I6):DT(J346) DC(I7):DG(J345) DG(I8):DC(J344) DA(I9):DT(J343) DA(I10):DT(J342) DA(I11):DT(J341) DA(I12):DT(J340) DA(I13):DT(J339) DA(I14):DT(J338) DA(I15):DT(J337) DA(I16):DT(J336) DA(I17):DT(J335) DA(I18):DT(J334) DC(I19):DG(J333) DG(I20):DC(J332) DC(I21):DG(J331) DA(I22):DT(J330) DT(I23):DA(J329) DC(I24):DG(J328) DC(I25):DG(J327) DC(I26):DG(J326) DG(I27):DC(J325) DG(I28):DC(J324) DT(I29):DA(J323) DG(I30):DC(J322) DC(I31):DG(J321) DC(I32):DG(J320) DG(I33):DC(J319) DA(I34):DT(J318) DG(I35):DC(J317) DG(I36):DC(J316) DC(I37):DG(J315) DC(I38):DG(J314) DG(I39):DC(J313) DC(I40):DG(J312) DT(I41):DA(J311) DC(I42):DG(J310) DA(I43):DT(J309) DA(I44):DT(J308) DT(I45):DA(J307) DT(I46):DA(J306) DG(I47):DC(J305) DG(I48):DC(J304) DT(I49):DA(J303) DC(I50):DG(J302) DG(I51):DC(J301) DT(I52):DA(J300) DA(I53):DT(J299) DG(I54):DC(J298) DA(I55):DT(J297) DC(I56):DG(J296) DA(I57):DT(J295) DG(I58):DC(J294) DC(I59):DG(J293) DT(I60):DA(J292) DC(I61):DG(J291) DT(I62):DA(J290) DA(I63):DT(J289) DG(I64):DC(J288) DC(I65):DG(J287) DA(I66):DT(J286) DC(I67):DG(J285) DC(I68):DG(J284) DG(I69):DC(J283) DC(I70):DG(J282) DT(I71):DA(J281) DT(I72):DA(J280) DA(I73):DT(J279) DA(I74):DT(J278) DA(I75):DT(J277) DC(I76):DG(J276) DG(I77):DC(J275) DC(I78):DG(J274) DA(I79):DT(J273) DC(I80):DG(J272) DG(I81):DC(J271) DT(I82):DA(J270) DA(I83):DT(J269) DC(I84):DG(J268) DG(I85):DC(J267) DC(I86):DG(J266) DG(I87):DC(J265) DC(I88):DG(J264) DT(I89):DA(J263) DG(I90):DC(J262) DT(I91):DA(J261) DC(I92):DG(J260) DT(I93):DA(J259) DA(I94):DT(J258) DC(I95):DG(J257) DC(I96):DG(J256) DG(I97):DC(J255) DC(I98):DG(J254) DG(I99):DC(J253) DT(I100):DA(J252) DT(I101):DA(J251) DT(I102):DA(J250) DT(I103):DA(J249) DA(I104):DT(J248) DA(I105):DT(J247) DC(I106):DG(J246) DC(I107):DG(J245) DG(I108):DC(J244) DC(I109):DG(J243) DC(I110):DG(J242) DA(I111):DT(J241) DC(I112):DG(J240) DT(I113):DA(J239) DA(I114):DT(J238) DG(I115):DC(J237) DA(I116):DT(J236) DA(I117):DT(J235) DG(I118):DC(J234) DC(I119):DG(J233) DG(I120):DC(J232) DC(I121):DG(J231) DT(I122):DA(J230) DT(I123):DA(J229) DA(I124):DT(J228) DC(I125):DG(J227) DT(I126):DA(J226) DA(I127):DT(J225) DG(I128):DC(J224) DT(I129):DA(J223) DC(I130):DG(J222) DT(I131):DA(J221) DC(I132):DG(J220) DC(I133):DG(J219) DA(I134):DT(J218) DG(I135):DC(J217) DG(I136):DC(J216) DC(I137):DG(J215) DA(I138):DT(J214) DC(I139):DG(J213) DG(I140):DC(J212) DT(I141):DA(J211) DG(I142):DC(J210) DT(I143):DA(J209) DG(I144):DC(J208) DA(I145):DT(J207) DG(I146):DC(J206) DA(I147):DT(J205) DC(I148):DG(J204) DC(I149):DG(J203) DG(I150):DC(J202) DG(I151):DC(J201) DC(I152):DG(J200) DA(I153):DT(J199) DC(I154):DG(J198) DA(I155):DT(J197) DT(I156):DA(J196) DG(I157):DC(J195) DA(I158):DT(J194) DA(I159):DT(J193) DA(I160):DT(J192) DA(I161):DT(J191) DA(I162):DT(J190) DA(I163):DT(J189) DA(I164):DT(J188) DA(I165):DT(J187) DA(I166):DT(J186) DA(I167):DT(J185) DT(I168):DA(J184) DG(I169):DC(J183) DC(I170):DG(J182) DA(I171):DT(J181) DT(I172):DA(J180) DG(I173):DC(J179) DC(I174):DG(J178) DT(I175):DA(J177) DC(I176):DG(J176) DG(I177):DC(J175) DA(I178):DT(J174) DG(I179):DC(J173) DT(I180):DA(J172) DA(I181):DT(J171) DT(I182):DA(J170) DG(I183):DC(J169) DA(I184):DT(J168) DA(I185):DT(J167) DA(I186):DT(J166) DA(I187):DT(J165) DA(I188):DT(J164) DA(I189):DT(J163) DA(I190):DT(J162) DA(I191):DT(J161) DA(I192):DT(J160) DA(I193):DT(J159) DT(I194):DA(J158) DC(I195):DG(J157) DG(I196):DC(J156) DC(I197):DG(J155) DA(I198):DT(J154) DT(I199):DA(J153) DC(I200):DG(J152) DC(I201):DG(J151) DC(I202):DG(J150) DG(I203):DC(J149) DG(I204):DC(J148) DT(I205):DA(J147) DG(I206):DC(J146) DC(I207):DG(J145) DC(I208):DG(J144) DG(I209):DC(J143) DA(I210):DT(J142) DG(I211):DC(J141) DG(I212):DC(J140) DC(I213):DG(J139) DC(I214):DG(J138) DG(I215):DC(J137) DC(I216):DG(J136) DT(I217):DA(J135) DC(I218):DG(J134) DA(I219):DT(J133) DA(I220):DT(J132) DT(I221):DA(J131) DT(I222):DA(J130) DG(I223):DC(J129) DG(I224):DC(J128) DT(I225):DA(J127) DC(I226):DG(J126) DG(I227):DC(J125) DT(I228):DA(J124) DA(I229):DT(J123) DG(I230):DC(J122) DA(I231):DT(J121) DC(I232):DG(J120) DA(I233):DT(J119) DG(I234):DC(J118) DC(I235):DG(J117) DT(I236):DA(J116) DC(I237):DG(J115) DT(I238):DA(J114) DA(I239):DT(J113) DG(I240):DC(J112) DC(I241):DG(J111) DA(I242):DT(J110) DC(I243):DG(J109) DC(I244):DG(J108) DG(I245):DC(J107) DC(I246):DG(J106) DT(I247):DA(J105) DT(I248):DA(J104) DA(I249):DT(J103) DA(I250):DT(J102) DA(I251):DT(J101) DC(I252):DG(J100) DG(I253):DC(J99) DC(I254):DG(J98) DA(I255):DT(J97) DC(I256):DG(J96) DG(I257):DC(J95) DT(I258):DA(J94) DA(I259):DT(J93) DC(I260):DG(J92) DG(I261):DC(J91) DC(I262):DG(J90) DG(I263):DC(J89) DC(I264):DG(J88) DT(I265):DA(J87) DG(I266):DC(J86) DT(I267):DA(J85) DC(I268):DG(J84) DT(I269):DA(J83) DA(I270):DT(J82) DC(I271):DG(J81) DC(I272):DG(J80) DG(I273):DC(J79) DC(I274):DG(J78) DG(I275):DC(J77) DT(I276):DA(J76) DT(I277):DA(J75) DT(I278):DA(J74) DT(I279):DA(J73) DA(I280):DT(J72) DA(I281):DT(J71) DC(I282):DG(J70) DC(I283):DG(J69) DG(I284):DC(J68) DC(I285):DG(J67) DC(I286):DG(J66) DA(I287):DT(J65) DC(I288):DG(J64) DT(I289):DA(J63) DA(I290):DT(J62) DG(I291):DC(J61) DA(I292):DT(J60) DA(I293):DT(J59) DG(I294):DC(J58) DC(I295):DG(J57) DG(I296):DC(J56) DC(I297):DG(J55) DT(I298):DA(J54) DT(I299):DA(J53) DA(I300):DT(J52) DC(I301):DG(J51) DT(I302):DA(J50) DA(I303):DT(J49) DG(I304):DC(J48) DT(I305):DA(J47) DC(I306):DG(J46) DT(I307):DA(J45) DC(I308):DG(J44) DC(I309):DG(J43) DA(I310):DT(J42) DG(I311):DC(J41) DG(I312):DC(J40) DC(I313):DG(J39) DA(I314):DT(J38) DC(I315):DG(J37) DG(I316):DC(J36) DT(I317):DA(J35) DG(I318):DC(J34) DT(I319):DA(J33) DG(I320):DC(J32) DA(I321):DT(J31) DG(I322):DC(J30) DA(I323):DT(J29) DC(I324):DG(J28) DC(I325):DG(J27) DG(I326):DC(J26) DG(I327):DC(J25) DC(I328):DG(J24) DA(I329):DT(J23) DC(I330):DG(J22) DA(I331):DT(J21) DT(I332):DA(J20) DG(I333):DC(J19) DA(I334):DT(J18) DA(I335):DT(J17) DA(I336):DT(J16) DA(I337):DT(J15) DA(I338):DT(J14) DA(I339):DT(J13) DA(I340):DT(J12) DA(I341):DT(J11) DA(I342):DT(J10) DA(I343):DT(J9) DC(I344):DG(J8) DG(I345):DC(J7) DT(I346):DA(J6) DC(I347):DG(J5) DA(I348):DT(J4) DG(I349):DC(J3) DC(I350):DG(J2) DG(I351):DC(J1) chainO ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >6m4d_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURAL MECHANISM OF NUCLEOSOME DYNAMICS GOVERNED BY HUMAN HISTONE VARIANTS H2A.B AND H2A.Z.2.2 organism=HOMO SAPIENS DNA sequence DA(J12):DT(I136) DT(J13):DA(I135) DT(J15):DT(I134) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J51):DA(I98) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) chainA ( 25) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 13) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 7) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 13) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence ellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpaiRrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/avsrsqraglqfpvgrihrhlktrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiag/rkesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/ellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpaiRrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/avsrsqraglqfpvgrihrhlktrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiag/rkesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >6m4d_C:Histone-fold; title=STRUCTURAL MECHANISM OF NUCLEOSOME DYNAMICS GOVERNED BY HUMAN HISTONE VARIANTS H2A.B AND H2A.Z.2.2 organism=HOMO SAPIENS DNA sequence DA(J12):DT(I136) DT(J13):DA(I135) DT(J15):DT(I134) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J51):DA(I98) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) chainC ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence avsrsqraglqfpvgrihrhlktrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiag >6m4g_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURAL MECHANISM OF NUCLEOSOME DYNAMICS GOVERNED BY HUMAN HISTONE VARIANTS H2A.B AND H2A.Z.2.2 organism=HOMO SAPIENS DNA sequence DT(I28):DA(J120) DG(I29):DC(J119) DG(I30):DC(J118) DA(I31):DT(J117) DG(I32):DC(J116) DA(I33):DT(J115) DC(I34):DG(J114) DT(I35):DA(J113) DA(I36):DT(J112) DG(I37):DC(J111) DG(I38):DC(J110) DG(I39):DC(J109) DA(I40):DT(J108) DG(I41):DC(J107) DT(I42):DA(J106) DA(I43):DT(J105) DA(I44):DT(J104) DT(I45):DA(J103) DC(I46):DG(J102) DC(I47):DG(J101) DC(I48):DG(J100) DC(I49):DG(J99) DT(I50):DA(J98) DT(I51):DA(J97) DG(I52):DC(J96) DG(I53):DC(J95) DC(I54):DG(J94) DG(I55):DC(J93) DG(I56):DC(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DA(I62):DT(J86) DC(I63):DG(J85) DG(I64):DC(J84) DC(I65):DG(J83) DG(I66):DC(J82) DG(I67):DC(J81) DG(I68):DC(J80) DG(I69):DC(J79) DG(I70):DC(J78) DC(I72):DG(J76) DA(I73):DT(J75) DG(I74):DC(J74) DC(I75):DG(J73) DG(I76):DC(J72) DC(I77):DG(J71) DG(I78):DC(J70) DT(I79):DA(J69) DA(I80):DT(J68) DC(I81):DG(J67) DG(I82):DC(J66) DT(I83):DA(J65) DG(I84):DC(J64) DC(I85):DG(J63) DG(I86):DC(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DG(I92):DC(J56) DC(I93):DG(J55) DG(I94):DC(J54) DG(I95):DC(J53) DT(I96):DA(J52) DG(I97):DC(J51) DC(I98):DG(J50) DT(I99):DA(J49) DA(I100):DT(J48) DG(I101):DC(J47) DA(I102):DT(J46) DG(I103):DC(J45) DC(I104):DG(J44) DT(I105):DA(J43) DG(I106):DC(J42) DT(I107):DA(J41) DC(I108):DG(J40) DT(I109):DA(J39) DA(I110):DT(J38) DC(I111):DG(J37) DG(I112):DC(J36) DA(I113):DT(J35) DC(I114):DG(J34) DC(I115):DG(J33) DA(I116):DT(J32) DA(I117):DT(J31) DT(I118):DA(J30) DT(I119):DA(J29) DG(I120):DC(J28) chainA chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE chainF chainH chainC chainG ( 27) ARG46 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence llirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/srtvraelsfsvsqverslrEghyaqrlsrtapvylaavieyltakvlelagneaqnsgernitpllldmvvhndrllstlfntttisqv/sysiyvykvlkqvhpdtgisSkamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/llirklpfqrlvreiaqdfkTdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/srtvraelsfsvsqverslreghyaqRlsrtapvylaavieyltakvlelagneaqnsgernitpllldmvvhndrllstlfntttisqv/sysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >6m4g_G:Histone-fold; title=STRUCTURAL MECHANISM OF NUCLEOSOME DYNAMICS GOVERNED BY HUMAN HISTONE VARIANTS H2A.B AND H2A.Z.2.2 organism=HOMO SAPIENS DNA sequence DC(J28):DG(I120) DA(J29):DT(I119) DA(J30):DT(I118) DT(J31):DA(I117) DT(J32):DA(I116) DG(J33):DC(I115) DG(J34):DC(I114) DT(J35):DA(I113) DC(J36):DG(I112) DG(J37):DC(I111) DT(J38):DA(I110) DA(J39):DT(I109) DG(J40):DC(I108) DA(J41):DT(I107) DC(J42):DG(I106) DA(J43):DT(I105) DG(J44):DC(I104) DC(J45):DG(I103) DT(J46):DA(I102) DC(J47):DG(I101) DT(J48):DA(I100) DA(J49):DT(I99) DG(J50):DC(I98) DC(J51):DG(I97) DA(J52):DT(I96) DC(J53):DG(I95) DC(J54):DG(I94) DG(J55):DC(I93) DC(J56):DG(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DC(J62):DG(I86) DG(J63):DC(I85) DC(J64):DG(I84) DA(J65):DT(I83) DC(J66):DG(I82) DG(J67):DC(I81) DT(J68):DA(I80) DA(J69):DT(I79) DC(J70):DG(I78) DG(J71):DC(I77) DC(J72):DG(I76) DG(J73):DC(I75) DC(J74):DG(I74) DT(J75):DA(I73) DG(J76):DC(I72) DC(J78):DG(I70) DC(J79):DG(I69) DC(J80):DG(I68) DC(J81):DG(I67) DC(J82):DG(I66) DG(J83):DC(I65) DC(J84):DG(I64) DG(J85):DC(I63) DT(J86):DA(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DC(J92):DG(I56) DC(J93):DG(I55) DG(J94):DC(I54) DC(J95):DG(I53) DC(J96):DG(I52) DA(J97):DT(I51) DA(J98):DT(I50) DG(J99):DC(I49) DG(J100):DC(I48) DG(J101):DC(I47) DG(J102):DC(I46) DA(J103):DT(I45) DT(J104):DA(I44) DT(J105):DA(I43) DA(J106):DT(I42) DC(J107):DG(I41) DT(J108):DA(I40) DC(J109):DG(I39) DC(J110):DG(I38) DC(J111):DG(I37) DT(J112):DA(I36) DA(J113):DT(I35) DG(J114):DC(I34) DT(J115):DA(I33) DC(J116):DG(I32) DT(J117):DA(I31) DC(J118):DG(I30) DC(J119):DG(I29) DA(J120):DT(I28) chainG ( 27) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence srtvraelsfsvsqverslreghyaqRlsrtapvylaavieyltakvlelagneaqnsgernitpllldmvvhndrllstlfntttisqv >6m4h_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURAL MECHANISM OF NUCLEOSOME DYNAMICS GOVERNED BY HUMAN HISTONE VARIANTS H2A.B AND H2A.Z.2.2 organism=HOMO SAPIENS DNA sequence DC(J23):DG(I125) DC(J24):DG(I124) DG(J25):DC(I123) DC(J26):DG(I122) DT(J27):DA(I121) DC(J28):DG(I120) DA(J29):DT(I119) DA(J30):DT(I118) DT(J31):DA(I117) DT(J32):DA(I116) DG(J33):DC(I115) DG(J34):DC(I114) DT(J35):DA(I113) DC(J36):DG(I112) DG(J37):DC(I111) DT(J38):DA(I110) DA(J39):DT(I109) DG(J40):DC(I108) DA(J41):DT(I107) DC(J42):DG(I106) DA(J43):DT(I105) DG(J44):DC(I104) DC(J45):DG(I103) DT(J46):DA(I102) DC(J47):DG(I101) DT(J48):DA(I100) DA(J49):DT(I99) DG(J50):DC(I98) DC(J51):DG(I97) DA(J52):DT(I96) DC(J53):DG(I95) DC(J54):DG(I94) DG(J55):DC(I93) DC(J56):DG(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DC(J62):DG(I86) DG(J63):DC(I85) DC(J64):DG(I84) DA(J65):DT(I83) DC(J66):DG(I82) DG(J67):DC(I81) DT(J68):DA(I80) DA(J69):DT(I79) DC(J70):DG(I78) DG(J71):DC(I77) DC(J72):DG(I76) DG(J73):DC(I75) DC(J74):DG(I74) DT(J75):DA(I73) DG(J76):DC(I72) DT(J77):DA(I71) DC(J78):DG(I70) DC(J79):DG(I69) DC(J80):DG(I68) DC(J81):DG(I67) DC(J82):DG(I66) DG(J83):DC(I65) DC(J84):DG(I64) DG(J85):DC(I63) DT(J86):DA(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DC(J92):DG(I56) DC(J93):DG(I55) DG(J94):DC(I54) DC(J95):DG(I53) DC(J96):DG(I52) DA(J97):DT(I51) DA(J98):DT(I50) DG(J99):DC(I49) DG(J100):DC(I48) DG(J101):DC(I47) DG(J102):DC(I46) DA(J103):DT(I45) DT(J104):DA(I44) DT(J105):DA(I43) DA(J106):DT(I42) DC(J107):DG(I41) DT(J108):DA(I40) DC(J109):DG(I39) DC(J110):DG(I38) DC(J111):DG(I37) DT(J112):DA(I36) DA(J113):DT(I35) DG(J114):DC(I34) DT(J115):DA(I33) DC(J116):DG(I32) DT(J117):DA(I31) DC(J118):DG(I30) DC(J119):DG(I29) DA(J120):DT(I28) DG(J121):DC(I27) DG(J122):DC(I26) DC(J123):DG(I25) DA(J124):DT(I24) DC(J125):DG(I23) chainA chainB chainC ( 30) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 51) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 51) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence llirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/srtvraelsfsvsqverslreghyaqrlsRtapvylaavieyltakvlelagneaqnsgernitpllldmvvhndrllstlfntttisqv/sysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkRstitsreiqtavrlllpgelakhavsegtkavtkyts/llirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlCaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/srtvraelsfsvsqverslrEghyaqrlsrtapvylaavieyltakvlelagneaqnsgernitpllldmvvhndrllstlfntttisqv/sysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkRstitsreiqtavrlllpgelakhavsegtkavtkyts >6m6a_CM: title=CRYO-EM STRUCTURE OF THERMUS THERMOPHILUS MFD IN COMPLEX WITH RNA POLYMERASE organism=? DNA sequence DC(N1):DG(T39) DC(N2):DG(T38) DT(N4):DT(T37) DA(N5):DT(T35) DT(N6):DA(T34) DG(N7):DC(T33) DG(N8):DC(T32) DT(N9):DA(T31) DT(N10):DA(T30) DG(N11):DC(T29) DG(N12):DC(T28) DG(N13):DC(T27) DC(N14):DG(T26) DT(N15):DA(T25) DA(N27):DT(T13) DC(N28):DG(T12) DG(N29):DC(T11) DG(N30):DC(T10) DC(N31):DG(T9) DG(N32):DC(T8) DA(N33):DT(T7) DA(N34):DT(T6) DT(N35):DA(T5) DA(N36):DT(T4) DC(N37):DG(T3) DC(N38):DG(T2) DC(N39):DG(T1) chainC chainM (380) ARG732 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/gdylihpehgvgqylgletrevlgvkrdylvlrykgegklylpveqlpllkrhlagrllvlqakrkatpgrafpplpewdplvekgfpyeltpdqkraleevlrdlesphpmdrlvsgdvgfgktevalraahrvvghgaqvaflvpttllaeqhgktfrerfqglpvrvavlsrftppkeeeailkglaegtvdivigthrllqedvrfrdlgllivdeehrfgvaqkerirelkaevdtlylsatpiprtlysalvglkdlssiqtpppgrkpiktflapfdpllvreailfelerggkvfyvhdrvasiearrrfleslvpearigvvhgqmpeslieetmllfaegaydvllattiieagldvpeantilieradRlglatlyqlrgrvgrreeeayaylfhpprlteaaekrlaaiadlsdlgsghllaerdmeirgvgslevytelleeairk >6m6b_CDM: title=CRYO-EM STRUCTURE OF THERMUS THERMOPHILUS MFD IN COMPLEX WITH RNA POLYMERASE AND ATP-GAMMA-S organism=? DNA sequence DG(T1):DC(N39) DG(T2):DC(N38) DG(T3):DC(N37) DT(T4):DA(N36) DA(T5):DT(N35) DT(T6):DA(N34) DT(T7):DA(N33) DC(T8):DG(N32) DG(T9):DC(N31) DC(T10):DG(N30) DC(T11):DG(N29) DG(T12):DC(N28) DT(T13):DA(N27) DA(T25):DT(N15) DG(T26):DC(N14) DC(T27):DG(N13) DC(T28):DG(N12) DC(T29):DG(N11) DA(T30):DT(N10) DA(T31):DT(N9) DC(T32):DG(N8) DC(T33):DG(N7) DA(T34):DT(N6) DT(T35):DA(N5) DA(T36):DT(N4) DT(T37):DA(N3) DG(T38):DC(N2) DG(T39):DC(N1) chainC chainD (305) ARG486 0 11 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM (175) ARG527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (201) HIS553 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (228) GLN580 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsRarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/gdylihpehgvgqylgletrevlgvkrdylvlrykgegklylpveqlpllkrhlagrllvlqakrkatpgrafpplpewdplvekgfpyeltpdqkraleevlrdlesphpmdrlvsgdvgfgktevalraahrvvghgaqvaflvpttllaeqhgktfrerfqglpvrvavlsRftppkeeeailkglaegtvdivigtHrllqedvrfrdlgllivdeehrfgvaQkerirelkaevdtlylsatpiprtlysalvglkdlssiqtpppgrkpiktflapfdpllvreailfelerggkvfyvhdrvasiearrrfleslvpearigvvhgqmpeslieetmllfaegaydvllattiieagldvpeantilieradrlglatlyqlrgrvgrreeeayaylfhpprlteaaekrlaaiadlsdlgsghllaerdmeirgvgslevytelleeairk >6m6c_CD: title=CRYOEM STRUCTURE OF THERMUS THERMOPHILUS RNA POLYMERASE ELONGATION COMPLEX organism=? DNA sequence DG(T1):DC(N29) DG(T2):DC(N28) DG(T3):DC(N27) DT(T4):DA(N26) DA(T5):DT(N25) DT(T6):DA(N24) DT(T7):DA(N23) DC(T8):DG(N22) DG(T9):DC(N21) DC(T10):DG(N20) DC(T11):DG(N19) DG(T12):DC(N18) DT(T13):DA(N17) DG(T14):DG(N16) DT(T15):DA(N6) DA(T16):DT(N5) DC(T17):DC(N4) DC(T18):DG(N3) DT(T19):DG(N2) DC(T20):DG(N1) chainC (135) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 (318) ILE325 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (319) ASP326 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (324) ARG331 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (411) LEU418 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 (414) GLU421 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 (415) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 (419) ASP426 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (420) VAL427 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 chainD (413) PRO594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (525) PRO706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (907) THR1088 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (908) ALA1089 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtrERagfDVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnPgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea >6m6c_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF THERMUS THERMOPHILUS RNA POLYMERASE ELONGATION COMPLEX organism=? DNA sequence DG(T1):DC(N29) DG(T2):DC(N28) DG(T3):DC(N27) DT(T4):DA(N26) DA(T5):DT(N25) DT(T6):DA(N24) DT(T7):DA(N23) DC(T8):DG(N22) DG(T9):DC(N21) DC(T10):DG(N20) DC(T11):DG(N19) DG(T12):DC(N18) DT(T13):DA(N17) DG(T14):DG(N16) DT(T15):DA(N6) DA(T16):DT(N5) DC(T17):DC(N4) DC(T18):DG(N3) DT(T19):DG(N2) DC(T20):DG(N1) chainD (413) PRO594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (525) PRO706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (907) THR1088 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (908) ALA1089 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnPgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea >6m7o_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA TERNARY COMPLEX WITH MN2+ AND DTMPNPP OPPOSITING CDA organism=Homo sapiens DNA sequence DA(P2):DT(T12) DG(P3):DC(T11) DT(P4):DA(T10) DG(P5):DC(T9) DT(P6):DA(T8) DG(P7):DC(T7) DA(P8):DT(T6) DG(P9):DC(T5) chainA (314) SER322 0 0 0 0 0 0 1 0 (374) ARG382 0 5 5 0 0 0 0 0 prot.sequence tgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgtvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsa >6m7p_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA EXTENSION COMPLEX WITH CDA AT THE -2 POSITION organism=Homo sapiens DNA sequence DA(P2):DT(T13) DG(P3):DC(T12) DT(P4):DA(T11) DG(P5):DC(T10) DT(P6):DA(T9) DG(P7):DC(T8) DT(P8):DC(T6) DG(P9):DT(T5) chainA ( 41) GLN38 0 0 0 0 0 0 0 5 ( 51) ILE48 0 0 0 0 0 0 0 1 (381) ARG382 0 0 6 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntstewsppltmlflcatkfsas >6m7t_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA IN A NON-PRODUCTIVE TERNARY COMPLEX WITH CA2+ AND DTTP OPPOSITING CDA organism=Homo sapiens DNA sequence DG(P2):DC(T11) DT(P3):DA(T10) DG(P4):DC(T9) DT(P5):DA(T8) DG(P6):DC(T7) DA(P7):DT(T6) DG(P8):DC(T5) chainA (368) LEU378 0 0 0 1 0 0 0 (372) ARG382 2 3 0 0 0 0 0 prot.sequence hmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfs >6m7u_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA IN A NON-PRODUCTIVE TERNARY COMPLEX WITH MG2+ AND DTMPNPP OPPOSITING CDA organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DT(P3):DA(T10) DG(P4):DC(T9) DT(P5):DA(T8) DG(P6):DC(T7) DA(P7):DT(T6) DG(P8):DC(T5) chainA (309) SER322 0 0 0 0 0 0 1 0 (369) ARG382 0 4 2 0 0 0 0 0 prot.sequence hmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfs >6m7v_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA EXTENSION COMPLEX WITH CDA AT THE -1 POSITION organism=Homo sapiens DNA sequence DG(P2):DC(T11) DT(P3):DA(T10) DG(P4):DC(T9) DT(P5):DA(T8) DG(P6):DC(T7) DA(P7):DT(T6) DG(P8):DC(T5) chainA (370) LEU378 0 0 0 2 0 0 0 (374) ARG382 0 2 0 0 0 0 0 prot.sequence hmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfs >6me0_C:DNA/RNA_polymerases; title=STRUCTURE OF A GROUP II INTRON RETROELEMENT PRIOR TO DNA INTEGRATION organism=THERMOSYNECHOCOCCUS ELONGATUS (STRAIN BP-1) / THERMOSYNECHOCOCCUS ELONGATUS (STRAIN BP-1) DNA sequence DG(B1) DG(B2) DG(B3) DT(B4) DT(B5) DG(B6) DG(B7) DC(B8) DC(B9) DG(B10) DA(B11) DG(B12) DC(B13) DG(B14) DG(B15) DA(B16) chainC (298) LYS332 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) LEU334 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) LYS336 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (349) VAL383 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (351) LYS385 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 (352) ARG386 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (355) ASN389 0 0 1 11 4 0 0 0 0 0 0 0 0 0 0 0 (359) ASP393 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (362) TRP396 0 0 0 0 0 0 64 0 0 0 0 0 0 0 0 0 (371) ARG405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (374) PRO408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (375) ASN409 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 (379) ARG413 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (382) LYS416 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (394) TRP428 0 0 0 0 0 0 15 4 0 0 0 0 0 0 0 0 prot.sequence dwakanrevkrlqvriakavkegrwgkvkalqwllthsfygkalavkrvtdnsgsktpgvdgitwstqeqkaqaikslrrrgykpqplrrvyipkasgkqrplgipttkdramqalyalalepvaettadrnsygfrqgrctadaagqcftvlgrsdcakyildaditgcfdnishewlldnipldkevlrkwlksgfvwkqqlfpgvispmlanmtldgmeellkkhlrkqkvnliryaddfvvtgesketlekvttviqeflkergltlseektkvvhieegfdflgwnirkygeKlLiKpakknikafhkkirdalkelrtatqeavidtlnpiikgwanyhrnqVsKRifNradDniWhklwrwakRrhPNkpaRwtKnkyfikignrhWvfgtwrsrylikagdtriqr >6mec_C:DNA/RNA_polymerases; title=STRUCTURE OF A GROUP II INTRON RETROELEMENT AFTER DNA INTEGRATION organism=THERMOSYNECHOCOCCUS ELONGATUS (STRAIN BP-1) / THERMOSYNECHOCOCCUS ELONGATUS (STRAIN BP-1) DNA sequence DG(B1) DG(B2) DG(B3) DT(B4) DT(B5) DG(B6) DG(B7) DC(B8) DC(B9) DG(B10) DA(B11) DG(B12) DC(B13) DG(B14) chainC (298) LYS332 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) LEU334 20 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) LYS336 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (349) VAL383 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (351) LYS385 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (352) ARG386 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (355) ASN389 0 0 0 8 2 0 0 0 0 0 0 0 0 0 (359) ASP393 0 0 0 0 0 2 6 0 0 0 0 0 0 0 (362) TRP396 0 0 0 0 0 0 79 0 0 0 0 0 0 0 (375) ASN409 0 0 0 0 0 0 0 0 0 0 0 0 1 4 (379) ARG413 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (382) LYS416 0 0 0 0 0 0 0 9 0 0 0 0 0 0 (394) TRP428 0 0 0 0 0 0 21 4 0 0 0 0 0 0 prot.sequence dwakanrevkrlqvriakavkegrwgkvkalqwllthsfygkalavkrvtdnsgsktpgvdgitwstqeqkaqaikslrrrgykpqplrrvyipkasgkqrplgipttkdramqalyalalepvaettadrnsygfrqgrctadaagqcftvlgrsdcakyildaditgcfdnishewlldnipldkevlrkwlksgfvwkqqlfpgvispmlanmtldgmeellkkhlrkqkvnliryaddfvvtgesketlekvttviqeflkergltlseektkvvhieegfdflgwnirkygeKlLiKpakknikafhkkirdalkelrtatqeavidtlnpiikgwanyhrnqVsKRifNradDniWhklwrwakrrhpNkpaRwtKnkyfikignrhWvfgtwrsrylikagdtriqr >6mg1_AB:Leucine_zipper_domain; title=C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA WITH 16BP METHYLATED OLIGONUCLEOTIDE CONTAINING CONSENSUS RECOGNITION SEQUENCE-C2 CRYSTAL FORM organism=Homo sapiens DNA sequence DA(C2):DT(D115) DT(C3):DA(D114) DA(C4):DT(D113) DT(C5):DA(D112) DT(C6):DA(D111) DG(C7):5CM(D110) 5CM(C8):DG(D109) DG(C9):5CM(D108) 5CM(C10):DG(D107) DA(C11):DT(D106) DA(C12):DT(D105) DT(C13):DA(D104) DA(C14):DT(D103) DT(C15):DA(D102) chainA ( 10) ARG278 0 0 0 0 0 0 0 0 4 6 0 0 0 0 ( 13) ASN281 0 0 0 0 0 0 0 0 2 7 8 2 0 0 ( 14) ASN282 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 16) ALA284 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 17) VAL285 0 0 0 0 0 0 0 0 5 6 3 0 0 0 ( 20) SER288 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 21) ARG289 0 0 0 0 0 0 14 13 6 1 0 0 0 0 chainB ( 10) ARG278 0 0 0 0 6 4 0 0 0 0 0 0 0 0 ( 13) ASN281 0 0 2 8 7 2 0 0 0 0 0 0 0 0 ( 14) ASN282 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 16) ALA284 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 17) VAL285 0 0 0 4 6 5 0 0 0 0 0 0 0 0 ( 20) SER288 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 21) ARG289 0 0 0 0 3 6 13 13 0 0 0 0 0 0 prot.sequence khsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpepl/khsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpepl >6mg1_B:Leucine_zipper_domain; title=C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA WITH 16BP METHYLATED OLIGONUCLEOTIDE CONTAINING CONSENSUS RECOGNITION SEQUENCE-C2 CRYSTAL FORM organism=Homo sapiens DNA sequence DA(C2):DT(D115) DT(C3):DA(D114) DA(C4):DT(D113) DT(C5):DA(D112) DT(C6):DA(D111) DG(C7):5CM(D110) 5CM(C8):DG(D109) DG(C9):5CM(D108) 5CM(C10):DG(D107) DA(C11):DT(D106) DA(C12):DT(D105) DT(C13):DA(D104) DA(C14):DT(D103) DT(C15):DA(D102) chainB ( 10) ARG278 0 0 0 0 6 4 0 0 0 0 0 0 0 0 ( 13) ASN281 0 0 2 8 7 2 0 0 0 0 0 0 0 0 ( 14) ASN282 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 16) ALA284 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 17) VAL285 0 0 0 4 6 5 0 0 0 0 0 0 0 0 ( 20) SER288 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 21) ARG289 0 0 0 0 3 6 13 13 0 0 0 0 0 0 prot.sequence khsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpepl >6mg2_AB:Leucine_zipper_domain; title=C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA WITH 16BP METHYLATED OLIGONUCLEOTIDE CONTAINING CONSENSUS RECOGNITION SEQUENCE-C2221 CRYSTAL FORM organism=Homo sapiens DNA sequence DT(C1):DA(D116) DA(C2):DT(D115) DT(C3):DA(D114) DA(C4):DT(D113) DT(C5):DA(D112) DT(C6):DA(D111) DG(C7):5CM(D110) 5CM(C8):DG(D109) DG(C9):5CM(D108) 5CM(C10):DG(D107) DA(C11):DT(D106) DA(C12):DT(D105) DT(C13):DA(D104) DA(C14):DT(D103) DT(C15):DA(D102) DA(C16):DT(D101) chainA ( 11) ARG278 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 0 2 7 8 3 0 0 0 ( 15) ASN282 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 0 5 6 3 0 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 22) ARG289 0 0 0 0 0 0 0 17 13 6 2 0 0 0 0 0 chainB ( 11) ARG278 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 ( 14) ASN281 0 0 0 3 7 7 2 0 0 0 0 0 0 0 0 0 ( 15) ASN282 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 17) ALA284 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL285 0 0 0 0 2 4 5 0 0 0 0 0 0 0 0 0 ( 21) SER288 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 22) ARG289 0 0 0 0 0 6 7 11 2 0 0 0 0 0 0 0 prot.sequence mkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk/mkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe >6mg2_B:Leucine_zipper_domain; title=C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA WITH 16BP METHYLATED OLIGONUCLEOTIDE CONTAINING CONSENSUS RECOGNITION SEQUENCE-C2221 CRYSTAL FORM organism=Homo sapiens DNA sequence DT(D101):DA(C16) DA(D102):DT(C15) DT(D103):DA(C14) DA(D104):DT(C13) DT(D105):DA(C12) DT(D106):DA(C11) DG(D107):5CM(C10) 5CM(D108):DG(C9) DG(D109):5CM(C8) 5CM(D110):DG(C7) DA(D111):DT(C6) DA(D112):DT(C5) DT(D113):DA(C4) DA(D114):DT(C3) DT(D115):DA(C2) DA(D116):DT(C1) chainB ( 11) ARG278 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 0 2 7 7 3 0 0 0 ( 15) ASN282 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 0 5 4 2 0 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 22) ARG289 0 0 0 0 0 0 0 2 11 7 6 0 0 0 0 0 prot.sequence mkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe >6mg3_A:Leucine_zipper_domain; title=V285A MUTANT OF THE C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA WITH 16BP METHYLATED OLIGONUCLEOTIDE CONTAINING CONSENSUS RECOGNITION SEQUENCE organism=Homo sapiens DNA sequence DT(C1):DA(D116) DA(C2):DT(D115) DT(C3):DA(D114) DA(C4):DT(D113) DT(C5):DA(D112) DT(C6):DA(D111) DG(C7):5CM(D110) 5CM(C8):DG(D109) DG(C9):5CM(D108) 5CM(C10):DG(D107) DA(C11):DT(D106) DA(C12):DT(D105) DT(C13):DA(D104) DA(C14):DT(D103) DT(C15):DA(D102) DA(C16):DT(D101) chainA ( 10) ARG278 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 ( 13) ASN281 0 0 0 0 0 0 0 0 0 3 7 5 2 0 0 0 ( 14) ASN282 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 16) ALA284 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 17) ALA285 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 ( 20) SER288 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 21) ARG289 0 0 0 0 0 0 0 16 13 7 5 0 0 0 0 0 prot.sequence khsdeykirRerNniAArkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk >6mg3_AB:Leucine_zipper_domain; title=V285A MUTANT OF THE C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA WITH 16BP METHYLATED OLIGONUCLEOTIDE CONTAINING CONSENSUS RECOGNITION SEQUENCE organism=Homo sapiens DNA sequence DT(D101):DA(C16) DA(D102):DT(C15) DT(D103):DA(C14) DA(D104):DT(C13) DT(D105):DA(C12) DT(D106):DA(C11) DG(D107):5CM(C10) 5CM(D108):DG(C9) DG(D109):5CM(C8) 5CM(D110):DG(C7) DA(D111):DT(C6) DA(D112):DT(C5) DT(D113):DA(C4) DA(D114):DT(C3) DT(D115):DA(C2) DA(D116):DT(C1) chainA ( 10) ARG278 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 ( 13) ASN281 0 0 0 2 5 7 3 0 0 0 0 0 0 0 0 0 ( 14) ASN282 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 16) ALA284 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 17) ALA285 0 0 0 0 1 3 2 0 0 0 0 0 0 0 0 0 ( 20) SER288 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 21) ARG289 0 0 0 0 0 5 7 13 16 0 0 0 0 0 0 0 chainB ( 10) ARG278 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 ( 13) ASN281 0 0 0 0 0 0 0 0 0 2 9 5 3 0 0 0 ( 14) ASN282 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 16) ALA284 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 17) ALA285 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 20) SER288 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 ( 21) ARG289 0 0 0 0 0 0 0 0 2 8 16 0 0 0 0 0 prot.sequence khsdeykirRerNniAArkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk/khsdeykirRerNniAArkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe >6mht_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND DNA CONTAINING 4'-THIO-2'DEOXYCYTIDINE AT THE TARGET organism=HAEMOPHILUS HAEMOLYTICUS DNA sequence DC(C402):DG(D433) DC(C403):DG(D432) DA(C404):DT(D431) DT(C405):DA(D430) DG(C406):DC(D429) 5CM(C407):DG(D428) DG(C408):4SC(D427) DC(C409):DG(D426) DT(C410):DA(D425) DG(C411):DC(D424) DA(C412):DT(D423) DC(C413):DG(D422) chainA ( 81) CYS81 0 0 0 0 0 0 6 0 0 0 0 0 ( 86) ILE86 0 0 0 0 0 0 0 1 2 1 0 0 ( 87) SER87 0 0 0 0 0 16 0 5 0 0 0 0 (119) GLU119 0 0 0 0 0 0 11 0 0 0 0 0 (120) ASN120 0 0 0 0 0 0 1 0 0 0 0 0 (121) VAL121 0 0 0 0 0 0 1 0 0 0 0 0 (163) ARG163 0 0 0 0 0 0 4 0 0 0 0 0 (165) ARG165 0 0 0 0 0 0 6 0 0 0 0 0 (237) GLN237 0 0 0 0 0 44 12 28 0 0 0 0 (239) GLU239 0 0 0 0 0 8 0 0 0 0 0 0 (240) ARG240 0 0 0 0 0 0 0 11 6 0 0 0 (260) ALA260 0 0 0 1 0 0 0 0 0 0 0 0 (261) LYS261 0 0 0 1 0 0 0 0 0 0 0 0 (304) ASN304 0 0 0 0 0 0 5 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvrlgivgkggQgeRiystrgiaitlsaygggifAKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy >6mig_A:DNA/RNA_polymerases; title=CRYSTAL STRUCTURE OF HOST-GUEST COMPLEX WITH PB HACHIMOJI DNA organism=Moloney murine leukemia virus (isolate Shinnick) / Moloney murine leukemia virus (isolate Shinnick) DNA sequence DA(G9):DT(B8) DA(G12):DT(B5) DT(G13):DA(B4) DA(G14):DT(B3) DA(G15):DT(B2) DG(G16):DC(B1) chainA ( 76) LEU99 0 0 0 0 0 15 ( 84) ASP114 0 0 0 0 0 11 ( 86) ARG116 0 0 0 4 6 7 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqypmsqearlgikphiqrlldqgilvpcqspwntplLpvyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >6mih_A:DNA/RNA_polymerases; title=CRYSTAL STRUCTURE OF HOST-GUEST COMPLEX WITH PC HACHIMOJI DNA organism=Moloney murine leukemia virus (isolate Shinnick) / Moloney murine leukemia virus (isolate Shinnick) DNA sequence DC(B1):DG(G16) DT(B2):DA(G15) DT(B3):DA(G14) DA(B4):DT(G13) DC(B6):DG(G11) DT(B8):DA(G9) chainA ( 41) TYR64 1 0 0 0 0 0 ( 76) LEU99 16 0 0 0 0 0 ( 84) ASP114 12 0 0 0 0 0 ( 86) ARG116 7 9 4 0 0 0 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >6ml2_A:beta-beta-alpha_zinc_fingers; title=ZBTB24 ZINC FINGERS 4-8 WITH 19+1MER DNA OLIGONUCLEOTIDE (SEQUENCE 1) organism=Mus musculus DNA sequence DT(F2):DA(E20) DT(F3):DA(E19) DA(F4):DT(E18) DG(F5):DC(E17) DC(F6):DG(E16) DT(F7):DA(E15) DG(F8):DC(E14) DC(F9):DG(E13) DC(F10):DG(E12) DA(F11):DT(E11) DG(F12):DC(E10) DG(F13):DC(E9) DA(F14):DT(E8) DC(F15):DG(E7) DC(F16):DG(E6) DT(F17):DA(E5) DG(F18):DC(E4) DC(F19):DG(E3) DG(F20):DC(E2) chainA ( 43) SER418 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN419 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 ( 47) LYS422 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 ( 68) THR443 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 69) ALA444 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 71) SER446 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 72) SER447 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 97) ASP472 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 ( 99) SER474 0 0 0 0 0 0 0 0 0 1 9 2 0 0 0 0 0 0 0 (100) ALA475 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (102) ARG477 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 (103) ARG478 0 0 0 0 0 0 0 0 0 0 0 0 6 13 11 0 0 0 0 (125) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 10 0 0 0 (127) ASP502 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 (128) ASN503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 prot.sequence sksftcdqcgkyfsqkrqlkshyrvhtslpecshchrkfmdvSQlkKhlrthtgekpftceicgksfTAkSSlqthirihrgekpyscsicgkcfsDsSAkRRhcilhtgkkpfscpecglqfaRlDNlkahlkihske >6ml3_A:beta-beta-alpha_zinc_fingers; title=ZBTB24 ZINC FINGERS 4-8 WITH 19+1MER DNA OLIGONUCLEOTIDE (SEQUENCE 2) organism=Mus musculus DNA sequence DT(F2):DA(E20) DT(F3):DA(E19) DA(F4):DT(E18) DG(F5):DC(E17) DC(F6):DG(E16) DT(F7):DA(E15) DT(F8):DA(E14) DC(F9):DG(E13) DC(F10):DG(E12) DA(F11):DT(E11) DG(F12):DC(E10) DG(F13):DC(E9) DA(F14):DT(E8) DC(F15):DG(E7) DC(F16):DG(E6) DT(F17):DA(E5) DG(F18):DC(E4) DC(F19):DG(E3) DG(F20):DC(E2) chainA ( 14) ASP416 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER418 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) GLN419 0 0 0 0 3 7 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LYS422 0 0 0 0 0 0 1 4 5 0 0 0 0 0 0 0 0 0 0 ( 41) THR443 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 42) ALA444 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 44) SER446 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 ( 45) SER447 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 ( 70) ASP472 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 ( 72) SER474 0 0 0 0 0 0 0 0 0 1 8 3 0 0 0 0 0 0 0 ( 73) ALA475 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 75) ARG477 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 ( 76) ARG478 0 0 0 0 0 0 0 0 0 0 0 0 4 14 14 0 0 0 0 ( 98) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 5 0 0 0 (100) ASP502 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 (101) ASN503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 prot.sequence slpecshchrkfmDvSQlkKhlrthtgekpftceicgksfTAkSSlqthirihrgekpyscsicgkcfsDsSAkRRhcilhtgkkpfscpecglqfaRlDNlkahlkihske >6ml4_A:beta-beta-alpha_zinc_fingers; title=BTB24 ZINC FINGERS 4-8 WITH 19+1MER DNA OLIGONUCLEOTIDE (SEQUENCE 3) organism=Mus musculus DNA sequence DG(F2):DC(E20) DC(F3):DG(E19) DT(F4):DA(E18) DT(F5):DA(E17) DC(F6):DG(E16) DG(F7):DC(E15) DT(F8):DA(E14) DC(F9):DG(E13) DC(F10):DG(E12) DA(F11):DT(E11) DG(F12):DC(E10) DG(F13):DC(E9) DA(F14):DT(E8) DC(F15):DG(E7) DC(F16):DG(E6) DT(F17):DA(E5) DG(F18):DC(E4) DC(F19):DG(E3) DG(F20):DC(E2) chainA ( 44) ASP416 0 0 0 5 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) SER418 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) GLN419 0 0 0 0 3 6 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) LYS422 0 0 0 0 0 0 7 4 3 0 0 0 0 0 0 0 0 0 0 ( 71) THR443 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 72) ALA444 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 74) SER446 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 ( 75) SER447 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 (100) ASP472 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 (102) SER474 0 0 0 0 0 0 0 0 0 2 7 4 0 0 0 0 0 0 0 (103) ALA475 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (105) ARG477 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 (106) ARG478 0 0 0 0 0 0 0 0 0 0 0 0 5 13 14 0 0 0 0 (128) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 7 0 0 0 (130) ASP502 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 (131) ASN503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 prot.sequence gsksftcdqcgkyfsqkrqlkshyrvhtghslpecshchrkfmDvSQlkKhlrthtgekpftceicgksfTAkSSlqthirihrgekpyscsicgkcfsDSSAkRRhcilhtgkkpfscpecglqfaRlDNlkahlkihskek >6ml5_A:beta-beta-alpha_zinc_fingers; title=ZBTB24 ZINC FINGERS 4-8 WITH 19+1MER DNA OLIGONUCLEOTIDE (SEQUENCE 4) organism=Mus musculus DNA sequence DA(F2):DT(E20) DA(F3):DT(E19) DT(F4):DA(E18) DT(F5):DA(E17) DC(F6):DG(E16) DG(F7):DC(E15) DT(F8):DA(E14) DC(F9):DG(E13) DC(F10):DG(E12) DA(F11):DT(E11) DG(F12):DC(E10) DG(F13):DC(E9) DA(F14):DT(E8) DC(F15):DG(E7) DC(F16):DG(E6) DT(F17):DA(E5) DG(F18):DC(E4) DC(F19):DG(E3) DG(F20):DC(E2) chainA ( 44) ASP416 0 0 0 3 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) SER418 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) GLN419 0 0 0 0 3 6 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 50) LYS422 0 0 0 0 0 0 7 3 2 0 0 0 0 0 0 0 0 0 0 ( 71) THR443 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 72) ALA444 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 74) SER446 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 ( 75) SER447 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 (100) ASP472 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 (102) SER474 0 0 0 0 0 0 0 0 0 1 8 3 0 0 0 0 0 0 0 (103) ALA475 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (105) ARG477 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 (106) ARG478 0 0 0 0 0 0 0 0 0 0 0 0 5 12 13 0 0 0 0 (128) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 10 0 0 0 (130) ASP502 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 (131) ASN503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 prot.sequence gsksftcdqcgkyfsqkrqlkshyrvhtghslpecshchrkfmDvSQlkKhlrthtgekpftceicgksfTAkSSlqthirihrgekpyscsicgkcfsDSSAkRRhcilhtgkkpfscpecglqfaRlDNlkahlkihske >6ml6_A:beta-beta-alpha_zinc_fingers; title=ZBTB24 ZINC FINGERS 4-8 WITH 19+1MER DNA OLIGONUCLEOTIDE (SEQUENCE 4 WITH A CPA 5MC MODIFICATION) organism=Mus musculus DNA sequence DA(F2):DT(E20) DA(F3):DT(E19) DT(F4):DA(E18) DT(F5):DA(E17) DC(F6):DG(E16) DG(F7):DC(E15) DT(F8):DA(E14) DC(F9):DG(E13) DC(F10):DG(E12) DA(F11):DT(E11) DG(F12):DC(E10) DG(F13):DC(E9) DA(F14):DT(E8) DC(F15):DG(E7) DC(F16):DG(E6) DT(F17):DA(E5) DG(F18):5CM(E4) DC(F19):DG(E3) DG(F20):DC(E2) chainA ( 44) ASP416 0 0 0 4 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) SER418 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) GLN419 0 0 0 0 3 6 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) LYS422 0 0 0 0 0 0 7 4 6 0 0 0 0 0 0 0 0 0 0 ( 71) THR443 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 72) ALA444 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 74) SER446 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 ( 75) SER447 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 (100) ASP472 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 (102) SER474 0 0 0 0 0 0 0 0 0 3 8 4 0 0 0 0 0 0 0 (103) ALA475 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (105) ARG477 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 (106) ARG478 0 0 0 0 0 0 0 0 0 0 0 0 5 13 14 0 0 0 0 (128) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 9 0 0 0 (130) ASP502 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 (131) ASN503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 prot.sequence gsksftcdqcgkyfsqkrqlkshyrvhtghslpecshchrkfmDvSQlkKhlrthtgekpftceicgksfTAkSSlqthirihrgekpyscsicgkcfsDSSAkRRhcilhtgkkpfscpecglqfaRlDNlkahlkihskek >6ml7_A:beta-beta-alpha_zinc_fingers; title=ZBTB24 ZINC FINGERS 4-8 WITH 19+1MER DNA OLIGONUCLEOTIDE (SEQUENCE 4 WITH A CPG 5MC MODIFICATION) organism=Mus musculus DNA sequence DC(E2):DG(F20) DG(E3):DC(F19) DC(E4):DG(F18) DA(E5):DT(F17) DG(E6):DC(F16) DG(E7):DC(F15) DT(E8):DA(F14) DC(E9):DG(F13) DC(E10):DG(F12) DT(E11):DA(F11) DG(E12):DC(F10) DG(E13):DC(F9) DA(E14):DT(F8) 5CM(E15):DG(F7) DG(E16):DC(F6) DA(E17):DT(F5) DA(E18):DT(F4) DT(E19):DA(F3) DT(E20):DA(F2) chainA ( 44) ASP416 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 8 0 0 0 ( 46) SER418 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 ( 47) GLN419 0 0 0 0 0 0 0 0 0 0 0 0 4 6 3 0 0 0 0 ( 50) LYS422 0 0 0 0 0 0 0 0 0 0 5 3 7 0 0 0 0 0 0 ( 71) THR443 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 72) ALA444 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 74) SER446 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 ( 75) SER447 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 (100) ASP472 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 (102) SER474 0 0 0 0 0 0 0 3 7 3 0 0 0 0 0 0 0 0 0 (103) ALA475 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (105) ARG477 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 (106) ARG478 0 0 0 0 13 12 5 0 0 0 0 0 0 0 0 0 0 0 0 (128) ARG500 0 0 0 7 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ASP502 0 0 0 0 1 9 6 0 0 0 0 0 0 0 0 0 0 0 0 (131) ASN503 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gsksftcdqcgkyfsqkrqlkshyrvhtghslpecshchrkfmDvSQlkKhlrthtgekpftceicgksfTAkSSlqthirihrgekpyscsicgkcfsDSSAkRRhcilhtgkkpfscpecglqfaRlDNlkahlkihskek >6mp3_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=BINARY STRUCTURE OF DNA POLYMERASE ETA IN COMPLEX WITH TEMPLATING HYPOXANTHINE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 3 0 0 0 0 0 0 (376) LEU378 0 4 2 0 0 0 0 0 (380) ARG382 0 0 0 0 10 18 0 0 (421) PHE423 0 2 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >6mq8_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=BINARY STRUCTURE OF DNA POLYMERASE ETA IN COMPLEX WITH TEMPLATING HYPOXANTHINE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (316) SER322 0 1 0 0 0 0 0 0 (372) LEU378 0 3 2 0 0 0 0 0 (376) ARG382 0 0 0 0 7 13 0 0 prot.sequence gtgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >6mr7_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH TEMPLATING ADENINE AND INCOMING FAPY-DGTP ANALOG organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 42 ( 26) LYS35 0 0 0 0 9 ( 29) ALA38 0 0 0 0 4 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6mr8_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=D276G DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH TEMPLATING ADENINE AND INCOMING FAPY-DGTP ANALOG organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 24) HIS34 0 0 0 0 40 ( 25) LYS35 0 0 0 0 9 ( 28) ALA38 0 0 0 0 4 prot.sequence lnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskekeyphrridirlipkdqyycgvlyftgsgifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6mrj_ABCD:ACT-like;Ribbon-helix-helix; title=CRYSTAL STRUCTURE OF H.PYLORI NIKR IN COMPLEX WITH DNA organism=Helicobacter pylori (strain ATCC 700392 / 26695) / Helicobacter pylori (strain ATCC 700392 / 26695) / Helicobacter pylori (strain ATCC 700392 / 26695) / Helicobacter pylori (strain ATCC 700392 / 26695) / Helicobacter pylori (strain ATCC 700392 / 26695) / Helicobacter pylori (strain ATCC 700392 / 26695) / Helicobacter pylori (strain ATCC 700392 / 26695) / Helicobacter pylori (strain ATCC 700392 / 26695) DNA sequence DC(M1):DG(L35) DA(M2):DT(L34) DG(M3):DC(L33) DA(M4):DT(L32) DT(M5):DA(L31) DA(M6):DT(L30) DT(M7):DA(L29) DA(M8):DT(L28) DA(M9):DT(L27) DC(M10):DG(L26) DA(M11):DT(L25) DC(M12):DG(L24) DT(M13):DA(L23) DA(M14):DT(L22) DA(M15):DT(L21) DT(M16):DA(L20) DT(M17):DA(L19) DC(M18):DG(L18) DA(M19):DT(L17) DT(M20):DA(L16) DT(M21):DA(L15) DT(M22):DA(L14) DT(M23):DA(L13) DA(M24):DT(L12) DA(M25):DT(L11) DA(M26):DT(L10) DT(M27):DA(L9) DA(M28):DT(L8) DA(M29):DT(L7) DT(M30):DA(L6) DA(M31):DT(L5) DA(M32):DT(L4) DT(M33):DA(L3) DT(M34):DA(L2) DA(M35):DT(L1) chainA ( 5) ARG12 0 0 0 0 0 8 13 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) SER14 0 0 0 0 0 0 0 0 2 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) SER16 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 6) ARG12 0 0 0 0 0 0 0 0 0 1 10 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) SER14 0 0 0 0 0 0 3 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) SER16 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER38 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 6) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 9 2 0 0 0 0 0 0 0 ( 8) SER14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 4 0 0 0 0 ( 10) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 chainD ( 7) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 11 0 0 0 ( 9) SER14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 ( 11) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 ( 72) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dsiiRfSvSlqqnlldeldnriikngyssrselvrdmireklvednwaednpndeskiavlvviydhhqrelnqrmidiqhasgthvlctthihmdehncletiilqgnsfeiqrlqleigglrgvkfakltka/ddsiiRfSvSlqqnlldeldnriikngyssrSelvrdmireklvednwaednpndeskiavlvviydhhqrelnqrmidiqhasgthvlctthihmdehncletiilqgnsfeiqrlqleigglrgvkfakltkassfeyne/ddsiiRfSvSlqqnlldeldnriikngyssrselvrdmireklvednwaednpndeskiavlvviydhhqrelnqrmidiqhasgthvlctthihmdehncletiilqgnsfeiqrlqleigglrgvkfakltkassfeyne/kddsiiRfSvSlqqnlldeldnriikngyssrselvrdmireklvednwaednpndeskiavlvviydhhqRelnqrmidiqhasgthvlctthihmdehncletiilqgnsfeiqrlqleigglrgvkfakltkass >6mrj_D:ACT-like;Ribbon-helix-helix; title=CRYSTAL STRUCTURE OF H.PYLORI NIKR IN COMPLEX WITH DNA organism=Helicobacter pylori (strain ATCC 700392 / 26695) / Helicobacter pylori (strain ATCC 700392 / 26695) DNA sequence DT(L1):DA(M35) DA(L2):DT(M34) DA(L3):DT(M33) DT(L4):DA(M32) DT(L5):DA(M31) DA(L6):DT(M30) DT(L7):DA(M29) DT(L8):DA(M28) DA(L9):DT(M27) DT(L10):DA(M26) DT(L11):DA(M25) DT(L12):DA(M24) DA(L13):DT(M23) DA(L14):DT(M22) DA(L15):DT(M21) DA(L16):DT(M20) DT(L17):DA(M19) DG(L18):DC(M18) DA(L19):DT(M17) DA(L20):DT(M16) DT(L21):DA(M15) DT(L22):DA(M14) DA(L23):DT(M13) DG(L24):DC(M12) DT(L25):DA(M11) DG(L26):DC(M10) DT(L27):DA(M9) DT(L28):DA(M8) DA(L29):DT(M7) DT(L30):DA(M6) DA(L31):DT(M5) DT(L32):DA(M4) DC(L33):DG(M3) DT(L34):DA(M2) DG(L35):DC(M1) chainD ( 7) ARG12 0 0 0 11 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) SER14 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) SER16 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kddsiiRfSvSlqqnlldeldnriikngyssrselvrdmireklvednwaednpndeskiavlvviydhhqRelnqrmidiqhasgthvlctthihmdehncletiilqgnsfeiqrlqleigglrgvkfakltkass >6mu4_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I FANA/DNA BINARY COMPLEX organism=Geobacillus stearothermophilus DNA sequence DG(P1) DC(P2) DG(P3) DA(P4) DT(P5) DC(P6) DA(P7) DC(P8) DG(P9) DT(P10) DT(P11) chainA (283) LYS582 0 0 0 0 0 0 2 5 0 0 0 (326) ASN625 0 0 0 0 0 0 0 0 7 1 0 (411) PHE710 0 0 0 0 0 0 0 0 0 0 2 (415) TYR714 0 0 0 0 0 0 0 0 0 0 6 prot.sequence aftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpdtkkvhtifnqaltqtgrlsstepnlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6mu5_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I TNA/DNA BINARY COMPLEX organism=Geobacillus stearothermophilus DNA sequence DG(P1) DC(P2) DG(P3) DA(P4) DT(P5) DC(P6) DA(P7) DC(P8) DG(P9) DT(P10) chainA (284) LYS582 0 0 0 0 0 0 5 0 0 0 (317) ARG615 0 0 0 0 0 0 0 0 1 5 (327) ASN625 0 0 0 0 0 0 0 4 0 0 (412) PHE710 0 0 0 0 0 0 0 0 0 8 (416) TYR714 0 0 0 0 0 0 0 0 0 13 (531) HIS829 0 0 0 0 0 0 0 0 1 1 prot.sequence maftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpdtkkvhtifnqaltqtgRlsstepnlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6mup_E:Histone-fold; title=CENP-A NUCLEOSOME BOUND BY TWO COPIES OF CENP-C(CD) AND TWO COPIES CENP-N(NT) organism=HOMO SAPIENS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DG(J-67):DC(I67) DA(J-66):DT(I66) DA(J-65):DT(I65) DG(J-64):DC(I64) DT(J-63):DA(I63) DT(J-62):DA(I62) DC(J-61):DG(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DA(J-58):DT(I58) DT(J-57):DA(I57) DA(J-56):DT(I56) DA(J-55):DT(I55) DA(J-54):DT(I54) DA(J-53):DT(I53) DG(J-52):DC(I52) DG(J-51):DC(I51) DC(J-50):DG(I50) DA(J-49):DT(I49) DA(J-48):DT(I48) DA(J-47):DT(I47) DC(J-46):DG(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DA(J-42):DT(I42) DG(J-41):DC(I41) DC(J-40):DG(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DC(J-36):DG(I36) DT(J-35):DA(I35) DC(J-34):DG(I34) DA(J-33):DT(I33) DG(J-32):DC(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DA(J-28):DT(I28) DT(J-27):DA(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DT(J-22):DA(I22) DG(J-21):DC(I21) DT(J-20):DA(I20) DG(J-19):DC(I19) DA(J-18):DT(I18) DT(J-17):DA(I17) DG(J-16):DC(I16) DA(J-15):DT(I15) DT(J-14):DA(I14) DG(J-13):DC(I13) DG(J-12):DC(I12) DA(J-11):DT(I11) DG(J-10):DC(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DT(J-7):DA(I7) DC(J-6):DG(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DC(J0):DG(I0) DA(J1):DT(I-1) DG(J2):DC(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DC(J5):DG(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DG(J20):DC(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DC(J34):DG(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DA(J52):DT(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainE ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qhsrrrqgwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl >6mup_M: title=CENP-A NUCLEOSOME BOUND BY TWO COPIES OF CENP-C(CD) AND TWO COPIES CENP-N(NT) organism=HOMO SAPIENS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DT(I-52):DA(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DT(I-41):DA(J41) DG(I-40):DC(J40) DA(I-38):DT(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DG(I-34):DC(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DG(I-5):DC(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DT(I-1):DA(J1) DG(I0):DC(J0) DT(I1):DA(J-1) DA(I3):DT(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DG(I6):DC(J-6) DA(I7):DT(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DC(I10):DG(J-10) DT(I11):DA(J-11) DC(I12):DG(J-12) DC(I13):DG(J-13) DA(I14):DT(J-14) DT(I15):DA(J-15) DC(I16):DG(J-16) DA(I17):DT(J-17) DT(I18):DA(J-18) DC(I19):DG(J-19) DA(I20):DT(J-20) DC(I21):DG(J-21) DA(I22):DT(J-22) DA(I24):DT(J-24) DG(I25):DC(J-25) chainM ( 44) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdetvaefikrtilkipmnelttilkawdflsenqlqtvnfrqRkesvvqhlihlceekrasisdaalldiiymqfhqhqkvwdvfqmskgfdmkqfknsfkkilqralknvtvsfreteenavwiriawgtqytkpnqykptyvvyysqtpyaftsssmlRrntpllgqaltiaskhhqivkmdlrsryldslkaivfkqynqt >6mxo_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF HPOLETA INCORPORATING DCTP OPPOSITE THE 3-PRIME PT(DACH)- GG organism=Homo sapiens DNA sequence DC(T5):DG(P9) DT(T6):DA(P8) DC(T7):DG(P7) DA(T8):DT(P6) DC(T9):DG(P5) DA(T10):DT(P4) DC(T11):DG(P3) DT(T12):DA(P2) chainA (318) SER322 0 1 0 0 0 0 0 0 (378) ARG382 0 0 0 0 0 5 7 0 prot.sequence gtgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >6mzm_ABTW:TATA-box_binding_protein-like;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain; title=HUMAN TFIID BOUND TO PROMOTER DNA AND TFIIA organism=HOMO SAPIENS DNA sequence DC(U81):DG(V80) DC(U82):DG(V79) DG(U83):DC(V78) DT(U84):DA(V77) DA(U85):DT(V76) DG(U86):DC(V75) DG(U87):DC(V74) DC(U88):DG(V73) DA(U89):DT(V72) DC(U90):DG(V71) DG(U91):DC(V70) DT(U92):DA(V69) DC(U93):DG(V68) DT(U94):DA(V67) DG(U95):DC(V66) DC(U96):DG(V65) DT(U97):DA(V64) DC(U98):DG(V63) DG(U99):DC(V62) DG(U100):DC(V61) DC(U101):DG(V60) DT(U102):DA(V59) DC(U103):DG(V58) DG(U104):DC(V57) DA(U105):DT(V56) DG(U106):DC(V55) DT(U107):DA(V54) DG(U108):DC(V53) DT(U109):DA(V52) DT(U110):DA(V51) DC(U111):DG(V50) DG(U112):DC(V49) DA(U113):DT(V48) DT(U114):DA(V47) DC(U115):DG(V46) DG(U116):DC(V45) DC(U117):DG(V44) DG(U118):DC(V43) DA(U119):DT(V42) DC(U120):DG(V41) DT(U121):DA(V40) DG(U122):DC(V39) DA(U123):DT(V38) DG(U124):DC(V37) DG(U125):DC(V36) DA(U126):DT(V35) DC(U127):DG(V34) DG(U128):DC(V33) DA(U129):DT(V32) DA(U130):DT(V31) DC(U131):DG(V30) DG(U132):DC(V29) DC(U133):DG(V28) DG(U134):DC(V27) DC(U135):DG(V26) DC(U136):DG(V25) DC(U137):DG(V24) DC(U138):DG(V23) DC(U139):DG(V22) DA(U140):DT(V21) DC(U141):DG(V20) DC(U142):DG(V19) DC(U143):DG(V18) DC(U144):DG(V17) DC(U145):DG(V16) DT(U146):DA(V15) DT(U147):DA(V14) DT(U148):DA(V13) DT(U149):DA(V12) DA(U150):DT(V11) DT(U151):DA(V10) DA(U152):DT(V9) DG(U153):DC(V8) DG(U154):DC(V7) DC(U155):DG(V6) DG(U156):DC(V5) DC(U157):DG(V4) DC(U158):DG(V3) DC(U159):DG(V2) DT(U160):DA(V1) chainA (256) ARG843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) LYS844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ARG854 0 0 0 0 0 0 0 0 0 0 0 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainT ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 10 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 chainW prot.sequence iiqhsipavelrqpffpthmgpiklrqfhrpplkkysfgalsqpgphsvqpllkhikkkakmreqerqasgggemffmrtpqdltgkdgdlilaeyseengplmmqvgmatkiknyykrkpgkdpgapdckygetvychtspflgslhpgqllqafennlfrapiylhkmpetdfliirtrqgyyirelvdifvvgqqcplfevpgpnskranthirdflqvfiyrlfwkskdrprrirmedikkafpshsessiRKrlklcadfkRtgmdsnwwvlksdfrlpteeeiramvspeqccayysmiaaeqrlkdagygeksfkiddevrtapwnttrafiaamkgkcllevtgvadptgcgegfsyvkipnkdadlrrlslknakqllrkfgvpeeeikklsrwevidvvrtmstesvaehqerykeecqrifdlqnkvlsstevl/fesprpyklthqvvcinninfqrksvvgfveltifptvanlnriklnskqcriyrvrindleaafiyndptlevchseskqrnlnyfsnayaaavsavdpdagngelcikvpselwkhvdelkvlkihinfsldqpkgglhfvvpsvegsmaergahvfscgyqnstrfwfpcvdsyselctwkleftvdaamvavsngdlvetvythdmrkktfhymltiptaasnislaigpfeilvdpymhevthfclpqllPLlkhttsylhEvfefyeeiltcrypyscfktvfideayvevaayasmsifstnllhsamiidetpltrrclaqslaqqffgcfisrmswsdewvlkgisgyiyglwmkktfgvneyrhwikeeldkivayelktggvllhpifgggkekdnpashlhfsikhphtlsweyysmfqckahlvmrlienrismefmlqvfnkllslastassqkfqshmwsqmlvstsgflksisnvsgkdiqplikqwvdqsgvvkfygsfafnrkrnvleleikqdytspgtqkyvgplkvtvqeldgsfnhtlqieenslkhdipchsksrrnkkkkiplmngeevdmdlsamdadspllwiridpdmsvlrkvefeqadfmwqyqlryerdvvaqqesilalekfptpasrlaltdileqeqcfyrvrmsacfclakiansmvstwtgppamkslftrmfcckscpnivktnnfmsfqsyflqktmpvamallrdvhnlcpkevltfildlikyndnrknkfsdnyyraemidalansvtpavsvnnevrtldnlnpdvrlileeitrflnmekllpsyrhtitvsclrairvlqknghvpsdpalfksyaeyghfvdiriaaleavvdytkvdrsyeelqwllnmiqndpvpyvrhkilnmltknppftknmesplcnealvdqlwklmnsgtshdwrlrcgavdlyftlfglsrpscl/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrkt/tvpklyrsViEdvindvrdiflddgvdeqvlmelktlwEnklmdtenvvvcqyDkIhrsknKwKfhlkdgimnlngrdyifskaigdaew >6n1p_A:Type_II_DNA_topoisomerase; title=DIHEDRAL OLIGOMERIC COMPLEX OF GYRA N-TERMINAL FRAGMENT WITH DNA, SOLVED BY CRYOEM IN C2 SYMMETRY organism=STREPTOCOCCUS PNEUMONIAE G54 DNA sequence DG(I1):DC(J44) DA(I2):DT(J43) DG(I3):DC(J42) DA(I4):DT(J41) DA(I5):DT(J40) DG(I6):DC(J39) DA(I7):DT(J38) DA(I8):DT(J37) DT(I9):DA(J36) DC(I10):DG(J35) DA(I11):DT(J34) DT(I12):DA(J33) DA(I13):DT(J32) DA(I14):DT(J31) DT(I15):DA(J30) DG(I16):DC(J29) DG(I17):DC(J28) DG(I18):DC(J27) DG(I19):DC(J26) DA(I20):DT(J25) DA(I21):DT(J24) DG(I22):DC(J23) DG(I23):DC(J22) DC(I24):DG(J21) DC(I25):DG(J20) DA(I26):DT(J19) DT(I27):DA(J18) DC(I28):DG(J17) DC(I29):DG(J16) DA(I30):DT(J15) DG(I31):DC(J14) DC(I32):DG(J13) DC(I33):DG(J12) DT(I34):DA(J11) DC(I35):DG(J10) DG(I36):DC(J9) DC(I37):DG(J8) DG(I38):DC(J7) DT(I39):DA(J6) DC(I40):DG(J5) DG(I41):DC(J4) DC(I42):DG(J3) DG(I43):DC(J2) DA(I44):DT(J1) chainA (422) LEU432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (423) GLU433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 39 5 (425) ASP435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (426) LYS436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 54 9 prot.sequence ltkemkasfidyamsvivaralpdvrdglkpvhrrilygmnelgvtpdkphkksaritgdvmgkyhphgdssiyeamvrmaqwwsyrymlvdghgnfgsmdgdsaaaqrytearmskialemlrdinkntvdfvdnydanereplvlparfpnllvngatgiavgmatnipphnlgetidavklvmdnpevttkdlmevlpgpdfptgalvmgksgihkayetgkgsivlrsrteiettktgrerivvtefpymvnktkvhehivrlvqekriegitavrdesnregvrfvievkrdasanvilnnlfkmtqmqtnfgfnmlaiqngipkilslrqildayiehqkevvvrrtrfdkekaearahilegllialdhideviriirasetdaeaqaelmskfklserqsqaildmrlrrltgLErDKiqseyddllaliadladilakpervsqiikdeldevkrkfsdkrrtelmv >6n1p_ABDFGH:Type_II_DNA_topoisomerase; title=DIHEDRAL OLIGOMERIC COMPLEX OF GYRA N-TERMINAL FRAGMENT WITH DNA, SOLVED BY CRYOEM IN C2 SYMMETRY organism=STREPTOCOCCUS PNEUMONIAE G54 DNA sequence DG(I1):DC(J44) DA(I2):DT(J43) DG(I3):DC(J42) DA(I4):DT(J41) DA(I5):DT(J40) DG(I6):DC(J39) DA(I7):DT(J38) DA(I8):DT(J37) DT(I9):DA(J36) DC(I10):DG(J35) DA(I11):DT(J34) DT(I12):DA(J33) DA(I13):DT(J32) DA(I14):DT(J31) DT(I15):DA(J30) DG(I16):DC(J29) DG(I17):DC(J28) DG(I18):DC(J27) DG(I19):DC(J26) DA(I20):DT(J25) DA(I21):DT(J24) DG(I22):DC(J23) DG(I23):DC(J22) DC(I24):DG(J21) DC(I25):DG(J20) DA(I26):DT(J19) DT(I27):DA(J18) DC(I28):DG(J17) DC(I29):DG(J16) DA(I30):DT(J15) DG(I31):DC(J14) DC(I32):DG(J13) DC(I33):DG(J12) DT(I34):DA(J11) DC(I35):DG(J10) DG(I36):DC(J9) DC(I37):DG(J8) DG(I38):DC(J7) DT(I39):DA(J6) DC(I40):DG(J5) DG(I41):DC(J4) DC(I42):DG(J3) DG(I43):DC(J2) DA(I44):DT(J1) chainA (422) LEU432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (423) GLU433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 39 5 (425) ASP435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (426) LYS436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 54 9 chainB chainD (115) TYR120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (115) TYR120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (422) LEU432 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) GLU433 16 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) LYS436 34 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence ltkemkasfidyamsvivaralpdvrdglkpvhrrilygmnelgvtpdkphkksaritgdvmgkyhphgdssiyeamvrmaqwwsyrymlvdghgnfgsmdgdsaaaqrytearmskialemlrdinkntvdfvdnydanereplvlparfpnllvngatgiavgmatnipphnlgetidavklvmdnpevttkdlmevlpgpdfptgalvmgksgihkayetgkgsivlrsrteiettktgrerivvtefpymvnktkvhehivrlvqekriegitavrdesnregvrfvievkrdasanvilnnlfkmtqmqtnfgfnmlaiqngipkilslrqildayiehqkevvvrrtrfdkekaearahilegllialdhideviriirasetdaeaqaelmskfklserqsqaildmrlrrltgLErDKiqseyddllaliadladilakpervsqiikdeldevkrkfsdkrrtelmv/lvnvnltkemkasfidyamsvivaralpdvrdglkpvhrrilygmnelgvtpdkphkksaritgdvmgkyhphgdssiyeamvrmaqwwsyrymlvdghgnfgsmdgdsaaaqrytearmskialemlrdinkntvdfvdnydanereplvlparfpnllvngatgiavgmatnipphnlgetidavklvmdnpevttkdlmevlpgpdfptgalvmgksgihkayetgkgsivlrsrteiettktgrerivvtefpymvnktkvhehivrlvqekriegitavrdesnregvrfvievkrdasanvilnnlfkmtqmqtnfgfnmlaiqngipkilslrqildayiehqkevvvrrtrfdkekaearahilegllialdhideviriirasetdaeaqaelmskfklserqsqaildmrlRRlTGlerdkiqseyddllaliadladilakpervsqiikdeldevkrkfsdkrrtelmv/lvnvnltkemkasfidyamsvivaralpdvrdglkpvhrrilygmnelgvtpdkphkksaritgdvmgkyhphgdssiyeamvrmaqwwsyrymlvdghgnfgsmdgdsaaaqrYtearmskialemlrdinkntvdfvdnydanereplvlparfpnllvngatgiavgmatnipphnlgetidavklvmdnpevttkdlmevlpgpdfptgalvmgksgihkayetgkgsivlrsrteiettktgrerivvtefpymvnktkvhehivrlvqekriegitavrdesnregvrfvievkrdasanvilnnlfkmtqmqtnfgfnmlaiqngipkilslrqildayiehqkevvvrrtrfdkekaearahilegllialdhideviriirasetdaeaqaelmskfklserqsqaildmrlrrltglerdkiqseyddllaliadladilakpervsqiikdeldevkrkfsdkrrtelmv/lvnvnltkemkasfidyamsvivaralpdvrdglkpvhrrilygmnelgvtpdkphkksaritgdvmgkyhphgdssiyeamvrmaqwwsyrymlvdghgnfgsmdgdsaaaqrYtearmskialemlrdinkntvdfvdnydanereplvlparfpnllvngatgiavgmatnipphnlgetidavklvmdnpevttkdlmevlpgpdfptgalvmgksgihkayetgkgsivlrsrteiettktgrerivvtefpymvnktkvhehivrlvqekriegitavrdesnregvrfvievkrdasanvilnnlfkmtqmqtnfgfnmlaiqngipkilslrqildayiehqkevvvrrtrfdkekaearahilegllialdhideviriirasetdaeaqaelmskfklserqsqaildmrlrrltglerdkiqseyddllaliadladilakpervsqiikdeldevkrkfsdkrrtelmv/ltkemkasfidyamsvivaralpdvrdglkpvhrrilygmnelgvtpdkphkksaritgdvmgkyhphgdssiyeamvrmaqwwsyrymlvdghgnfgsmdgdsaaaqrytearmskialemlrdinkntvdfvdnydanereplvlparfpnllvngatgiavgmatnipphnlgetidavklvmdnpevttkdlmevlpgpdfptgalvmgksgihkayetgkgsivlrsrteiettktgrerivvtefpymvnktkvhehivrlvqekriegitavrdesnregvrfvievkrdasanvilnnlfkmtqmqtnfgfnmlaiqngipkilslrqildayiehqkevvvrrtrfdkekaearahilegllialdhideviriirasetdaeaqaelmskfklserqsqaildmrlrrltgLErdKiqseyddllaliadladilakpervsqiikdeldevkrkfsdkrrtelmv/lvnvnltkemkasfidyamsvivaralpdvrdglkpvhrrilygmnelgvtpdkphkksaritgdvmgkyhphgdssiyeamvrmaqwwsyrymlvdghgnfgsmdgdsaaaqrytearmskialemlrdinkntvdfvdnydanereplvlparfpnllvngatgiavgmatnipphnlgetidavklvmdnpevttkdlmevlpgpdfptgalvmgksgihkayetgkgsivlrsrteiettktgrerivvtefpymvnktkvhehivrlvqekriegitavrdesnregvrfvievkrdasanvilnnlfkmtqmqtnfgfnmlaiqngipkilslrqildayiehqkevvvrrtrfdkekaearahilegllialdhideviriirasetdaeaqaelmskfklserqsqaildmrlRRltGlerdkiqseyddllaliadladilakpervsqiikdeldevkrkfsdkrrtelmv >6n2r_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH 5- CARBOXY-DC (5-CAC) AT THE TEMPLATING POSITION organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 40 0 0 0 0 ( 26) LYS35 6 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6n2s_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH 5- CARBOXY-DC (5-CAC) AT THE TEMPLATING POSITION organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 34 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnKnmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6n2t_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH 5- HYDROXYMETHYL-DC (5-HMC) AT THE TEMPLATING POSITION organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 30 0 0 0 0 ( 26) LYS35 3 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6n7i_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF BACTERIOPHAGE T7 E343Q MUTANT GP4 HELICASE-PRIMASE IN COMPLEX WITH SSDNA, DTTP, AC DINUCLEOTIDE AND CTP (GP4(5)-DNA) organism=? DNA sequence DT(T4) DT(T5) DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T15) DT(T16) DT(T17) DT(T18) chainA (159) ASP437 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (161) ARG439 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 prot.sequence gvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvDeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg >6n7i_ABCDE:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_primase_core;Zinc_beta-ribbon; title=STRUCTURE OF BACTERIOPHAGE T7 E343Q MUTANT GP4 HELICASE-PRIMASE IN COMPLEX WITH SSDNA, DTTP, AC DINUCLEOTIDE AND CTP (GP4(5)-DNA) organism=ENTEROBACTERIA PHAGE T7 DNA sequence DT(T4) DT(T5) DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T15) DT(T16) DT(T17) DT(T18) chainA (159) ASP437 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (161) ARG439 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 chainB (162) ASP437 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (164) ARG439 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 chainC (171) ARG439 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 chainD (161) ARG439 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 chainE (135) ARG439 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvDeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/gvvsalslrerirehlsssvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvsDeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/dgvvsalslrerirehlsssvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydsetdrllaklaymrsglgcdviildhisivvsasgesdeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqmpnlvlvrilkcrftgdtgiagymeynketgwlepssy/dgvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvsRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/vgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiikfdqwfdelfgndtfhlydrllaklaymrsglgcdviildhisivRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwleps >6n7n_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_primase_core;Zinc_beta-ribbon; title=STRUCTURE OF BACTERIOPHAGE T7 E343Q MUTANT GP4 HELICASE-PRIMASE IN COMPLEX WITH SSDNA, DTTP, AC DINUCLEOTIDE AND CTP (FORM I) organism=ENTEROBACTERIA PHAGE T7 DNA sequence DT(T4) DT(T5) DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T15) DT(T16) DT(T17) DT(T18) chainA (159) ASP437 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (161) ARG439 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 chainB (164) ARG439 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 chainC chainD (161) ARG439 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 chainE (153) ARG439 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 chainF prot.sequence gvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvDeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/gvvsalslrerirehlsssvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvsdeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/dgvvsalslrerirehlsssvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydsetdrllaklaymrsglgcdviildhisivvsAsgesderkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqmpnlvlvrilkcrftgdtgiagymeynketgwlepssy/dgvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvsRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/dgvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiikfdqwfdelfgndtfhlydrllaklaymrsglgcdviildhisivRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwleps/gvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiikfdqwfdelfgndtfhlydrllaklaymrsglgcdviildhisivkMidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwleps >6n7n_D:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF BACTERIOPHAGE T7 E343Q MUTANT GP4 HELICASE-PRIMASE IN COMPLEX WITH SSDNA, DTTP, AC DINUCLEOTIDE AND CTP (FORM I) organism=? DNA sequence DT(T4) DT(T5) DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T15) DT(T16) DT(T17) DT(T18) chainD (161) ARG439 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 prot.sequence dgvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvsRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg >6n7s_ABCDE:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_primase_core;Zinc_beta-ribbon; title=STRUCTURE OF BACTERIOPHAGE T7 E343Q MUTANT GP4 HELICASE-PRIMASE IN COMPLEX WITH SSDNA, DTTP, AC DINUCLEOTIDE AND CTP (FORM II) organism=ENTEROBACTERIA PHAGE T7 DNA sequence DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T15) DT(T16) DT(T17) DT(T18) chainA (159) ASP437 0 0 0 0 0 0 0 0 0 3 6 0 0 (161) ARG439 0 0 0 0 0 0 0 0 0 3 1 0 0 (192) ASP470 0 0 0 0 0 0 0 0 0 0 0 0 2 chainB (163) ARG439 0 0 0 0 0 0 4 0 0 0 0 0 0 chainC chainD (161) ARG439 0 0 4 2 0 0 0 0 0 0 0 0 0 (192) ASP470 0 0 0 0 0 0 0 2 2 0 0 0 0 chainE (153) ARG439 14 7 0 0 0 0 0 0 0 0 0 0 0 (184) ASP470 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence gvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvDeRkmidnlmtklkgfakstgvvlvvichlknpDkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/gvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvssdeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/dgvvsalslrerirehlssvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydsetdrllaklaymrsglgcdviildhisivvsAsgesderkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqmpnlvlvrilkcrftgdtgiagymeynketgwlepssy/dgvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvsRkmidnlmtklkgfakstgvvlvvichlknpDkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/dgvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiikfdqwfdelfgndtfhlydrllaklaymrsglgcdviildhisivRkmidnlmtklkgfakstgvvlvvichlknpDkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwleps >6n7s_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF BACTERIOPHAGE T7 E343Q MUTANT GP4 HELICASE-PRIMASE IN COMPLEX WITH SSDNA, DTTP, AC DINUCLEOTIDE AND CTP (FORM II) organism=? DNA sequence DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T15) DT(T16) DT(T17) DT(T18) chainB (163) ARG439 0 0 0 0 0 0 4 0 0 0 0 0 0 prot.sequence gvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvssdeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg >6n7t_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_primase_core;Zinc_beta-ribbon; title=STRUCTURE OF BACTERIOPHAGE T7 E343Q MUTANT GP4 HELICASE-PRIMASE IN COMPLEX WITH SSDNA, DTTP, AC DINUCLEOTIDE AND CTP (FORM III) organism=ENTEROBACTERIA PHAGE T7 DNA sequence DT(T5) DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T15) DT(T16) DT(T17) DT(T18) DT(T19) DT(T20) chainA (161) ARG439 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 chainB (162) ASP437 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (164) ARG439 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainC (168) ASP437 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (170) ARG439 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainD (161) ARG439 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 chainE (152) ARG439 0 9 13 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (155) ARG439 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence gvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvdeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/gvvsalslrerirehlsssvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvsDeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/dgvvsalslrerirehlssvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydsetdrllaklaymrsglgcdviildhisivvsasgesDeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqmpnlvlvrilkcrftgdtgiagymeynketgwlepssy/dgvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvsRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/gvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiikfdqwfdelfgndtfhlydrllaklaymrsglgcdviildhisivRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwleps/gvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydslaklaymrsglgcdviildhisiveRkmidnlmtklkgfakstgvvlvvichlknpaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg >6n7t_D:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF BACTERIOPHAGE T7 E343Q MUTANT GP4 HELICASE-PRIMASE IN COMPLEX WITH SSDNA, DTTP, AC DINUCLEOTIDE AND CTP (FORM III) organism=ENTEROBACTERIA PHAGE T7 DNA sequence DT(T5) DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T15) DT(T16) DT(T17) DT(T18) DT(T19) DT(T20) chainD (161) ARG439 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dgvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvsRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg >6n7v_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF BACTERIOPHAGE T7 GP4 (HELICASE-PRIMASE, E343Q MUTANT) IN COMPLEX WITH SSDNA, DTTP, AC DINUCLEOTIDE, AND CTP (FROM MULTIPLE LEAD COMPLEXES) organism=? DNA sequence DT(T4) DT(T5) DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T15) DT(T16) DT(T17) DT(T18) DT(T19) chainA (161) ARG439 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 prot.sequence gvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvdeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg >6n7v_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases;DNA_primase_core;Zinc_beta-ribbon; title=STRUCTURE OF BACTERIOPHAGE T7 GP4 (HELICASE-PRIMASE, E343Q MUTANT) IN COMPLEX WITH SSDNA, DTTP, AC DINUCLEOTIDE, AND CTP (FROM MULTIPLE LEAD COMPLEXES) organism=ENTEROBACTERIA PHAGE T7 DNA sequence DT(T4) DT(T5) DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T15) DT(T16) DT(T17) DT(T18) DT(T19) chainA (161) ARG439 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 chainB (164) ARG439 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 chainC (171) ARG439 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 chainD (161) ARG439 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 chainE (153) ARG439 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 chainF (149) ARG439 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvdeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/gvvsalslrerirehlsssvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvsdeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/dgvvsalslrerirehlsssvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydsetdrllaklaymrsglgcdviildhisivvsasgesdeRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqmpnlvlvrilkcrftgdtgiagymeynketgwlepssy/dgvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiiengkfdqwfdelfgndtfhlydstdrllaklaymrsglgcdviildhisivvsRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwlepssysg/dgvvsalslrerirehlsvgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiikfdqwfdelfgndtfhlydrllaklaymrsglgcdviildhisivRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwleps/gvvsalslrerirevgllfsgctgindktlgarggevimvtsgsgmgkstfvrqqalqwgtamgkkvglamlqesveetaedliglhnrvrlrqsdslkreiikfdqwfdelfgndtfhlydrllaklaymrsglgcdviildhisivRkmidnlmtklkgfakstgvvlvvichlknpdkgkaheegrpvsitdlrgsgalrqlsdtiialernqqgdmpnlvlvrilkcrftgdtgiagymeynketgwleps >6n7w_H:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF BACTERIOPHAGE T7 LEADING-STRAND DNA POLYMERASE (D5A/E7A)/TRX IN COMPLEX WITH A DNA FORK AND INCOMING DTTP (FROM MULTIPLE LEAD COMPLEXES) organism=ENTEROBACTERIA PHAGE T7 DNA sequence DC(T54):DG(P24) DA(T55):DT(P23) DC(T56):DG(P22) DG(T57):DC(P21) DC(T58):DG(P20) DT(T59):DA(P19) DA(T60):DT(P18) DT(T61):DA(P17) DG(T62):DC(P16) DT(T63):DA(P15) DC(T64):DG(P14) DG(T65):DC(P13) DT(T66):DA(P12) DC(T67):DG(P11) DA(T68):DT(P10) DA(T69):DT(P9) DG(T70):DC(P8) DT(T71):DA(P7) DT(T72):DA(P6) DG(T73):DC(P5) DT(T74):DA(P4) DA(T75):DT(P3) DC(T76):DG(P2) DC(T77):DG(P1) chainH (392) LYS394 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (427) ARG429 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) ASN436 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) GLN439 0 13 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (613) GLN615 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (651) HIS653 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivsdieanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrklpgkrfgshaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkypriktpkvggifkkpknkaqregrepceldtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpNlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnaktfiygflygagdekigqivgagkergkelkkkflentpaiaalresiqqtlvessqwvageqqvkwkrrwikgldgrkvhvrsphaalntllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >6nce_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN FOXN3 DNA BINDING DOMAIN IN COMPLEX WITH A FORKHEAD DNA SEQUENCE organism=Homo sapiens DNA sequence DC(C2):DG(D16) DT(C3):DA(D15) DT(C4):DA(D14) DA(C5):DT(D13) DA(C6):DT(D12) DG(C7):DC(D11) DT(C8):DA(D10) DA(C9):DT(D9) DA(C10):DT(D8) DA(C11):DT(D7) DC(C12):DG(D6) DA(C13):DT(D5) DA(C14):DT(D4) DT(C15):DA(D3) DG(C16):DC(D2) chainA ( 50) ASN160 0 0 0 0 0 0 0 2 9 3 0 0 0 0 0 ( 51) SER161 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 53) ARG163 0 0 0 0 0 0 0 0 0 1 13 11 0 0 0 ( 54) HIS164 0 0 0 0 0 0 10 6 7 0 0 0 0 0 0 ( 57) SER167 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 prot.sequence gnckppysfsclifmaiedsptkrlpvkdiynwilehfpyfanaptgwkNSvRHnlSlnkcfkkvdkgslwcidpeyrqnliqalkktp >6ncm_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN FOXN3 DNA BINDING DOMAIN IN COMPLEX WITH A FORKHEAD-LIKE (FHL) DNA SEQUENCE organism=Homo sapiens DNA sequence DC(D2):DG(C16) DA(D3):DT(C15) DT(D4):DA(C14) DG(D5):DC(C13) DC(D6):DG(C12) DT(D7):DA(C11) DA(D8):DT(C10) DA(D9):DT(C9) DG(D10):DC(C8) DA(D11):DT(C7) DC(D12):DG(C6) DG(D13):DC(C5) DC(D14):DG(C4) DT(D15):DA(C3) DA(D16):DT(C2) chainA ( 48) ASN160 0 0 0 0 0 0 0 0 0 0 3 10 2 0 0 ( 49) SER161 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 51) ARG163 0 0 0 0 0 0 0 0 0 0 0 5 15 17 0 ( 52) HIS164 0 0 0 0 0 0 0 0 4 7 14 2 0 0 0 ( 55) SER167 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 prot.sequence ckppysfsclifmaiedsptkrlpvkdiynwilehfpyfanaptgwkNSvRHnlSlnkcfkkvdkkgslwcidpeyrqnliqalkktpyhp >6ncm_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN FOXN3 DNA BINDING DOMAIN IN COMPLEX WITH A FORKHEAD-LIKE (FHL) DNA SEQUENCE organism=Homo sapiens DNA sequence DT(C2):DA(D16) DA(C3):DT(D15) DG(C4):DC(D14) DC(C5):DG(D13) DG(C6):DC(D12) DT(C7):DA(D11) DC(C8):DG(D10) DT(C9):DA(D9) DT(C10):DA(D8) DA(C11):DT(D7) DG(C12):DC(D6) DC(C13):DG(D5) DA(C14):DT(D4) DT(C15):DA(D3) DG(C16):DC(D2) chainA ( 48) ASN160 0 0 2 10 3 0 0 0 0 0 0 0 0 0 0 ( 49) SER161 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 ( 51) ARG163 0 17 15 5 0 0 0 0 0 0 0 0 0 0 0 ( 52) HIS164 0 0 0 2 14 7 4 0 0 0 0 0 0 0 0 ( 55) SER167 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 chainB ( 50) SER161 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) HIS164 10 15 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) LEU168 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ckppysfsclifmaiedsptkrlpvkdiynwilehfpyfanaptgwkNSvRHnlSlnkcfkkvdkkgslwcidpeyrqnliqalkktpyhp/nckppysfsclifmaiedsptkrlpvkdiynwilehfpyfanaptgwknSvrHnlsLnkcfkkvdgslwcidpeyrqnliqalkktp >6ne0_AH: title=STRUCTURE OF DOUBLE-STRANDED TARGET DNA ENGAGED CSY COMPLEX FROM PSEUDOMONAS AERUGINOSA (PA-14) organism=PSEUDOMONAS AERUGINOSA UCBPP-PA14 DNA sequence DA(O1):DT(N44) DG(O2):DC(N43) DA(O3):DT(N42) DA(O4):DT(N41) DG(O5):DC(N40) DC(O6):DG(N39) DT(O7):DA(N38) DG(O8):DC(N37) DC(O9):DG(N36) DA(O10):DT(N35) DC(O11):DG(N34) DC(O12):DG(N33) chainA (101) ASN111 0 0 0 0 0 0 0 0 0 5 4 0 (102) ALA112 0 0 0 0 0 0 0 0 0 0 1 2 (103) ALA113 0 0 0 0 0 0 0 0 0 0 3 0 (237) LYS247 0 0 0 0 0 0 0 0 0 0 0 17 (239) GLN249 0 0 0 0 0 0 0 0 0 0 0 4 (240) ASN250 0 0 0 0 0 0 0 0 0 0 8 12 chainH prot.sequence qelrqfiesfiqerlqgkldklqpdeddkrqtllathrreawladaarrvgqlqlvthtlkpihpdargsnlhslpqapgqpglagshelgdrlvsdvvgNAAaldvfkflslqyqgknllnwltedsaealqalsdnaeqarewrqafigittvkgapashslakqlyfplpgsgyhllaplfptslvhhvhallrearfgdaakaarearsrqeswphgfseypnlaiqkfggtKpQNisqlnnerrgenwllpslppnwqrqnvnapevsrltrtlqrflaktvhnnlairqrraqlvaqicdealqyaarlrelepgwsatpgcqlhdaeqlwldplraqtdetflqrrlrgdwpaevgnrfanwlnravssdsqilgspeaaqwsqelskeltmfk/lstasvlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisnrlktkdrdpakldasiqspnlqtvdvanlpsdadtlkvrftlrvlggagtPSAcndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqelildkgdkkgqKsKTlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggvfge >6ne0_BCDEFG: title=STRUCTURE OF DOUBLE-STRANDED TARGET DNA ENGAGED CSY COMPLEX FROM PSEUDOMONAS AERUGINOSA (PA-14) organism=PSEUDOMONAS AERUGINOSA UCBPP-PA14 DNA sequence DC(N43) DT(N42) DT(N41) DC(N40) DG(N39) DA(N38) DC(N37) DG(N36) DT(N35) DG(N34) DG(N33) DA(N32) DA(N31) DG(N30) DT(N29) DG(N28) DC(N27) DC(N26) DG(N25) DC(N24) DC(N23) DC(N22) DG(N21) DA(N20) DA(N19) DC(N18) DT(N17) DA(N16) DC(N15) DA(N14) DG(N13) DG(N12) DC(N11) DG(N10) DC(N9) DA(N8) DG(N7) DA(N6) DT(N5) DG(N4) DG(N3) DA(N2) DC(N1):DA(N2) chainB ( 83) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) THR94 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 6) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 (290) VAL354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 chainD ( 6) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 8) ALA32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 49) SER73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 50) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 69) PRO93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 ( 70) ASN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 ( 71) LEU95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 9 ( 72) GLN96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 (228) LEU252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 (233) LYS257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (234) LYS258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (238) SER262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (330) VAL354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 chainE ( 7) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 70) PRO93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 71) ASN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 72) LEU95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 ( 73) GLN96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 ( 75) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (229) LEU252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) VAL354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 15 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LEU252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) VAL354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 6) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ALA32 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) PRO93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LEU95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) LEU252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) LYS254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) VAL354 0 0 0 0 0 0 0 0 0 0 0 0 0 15 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vtdpeallllprlsiqnanaisspltwgfpspgaftgfvhalqrrvgisldieldgvgivchrfeaqisqpagkrtkvfnltRnplnrdgsTaaiveegrahlevslllgvhgdglddhpaqeiarqvqeqagamrlaggsilpwcnerfpapnaellmlggsdeqrrknqrrltrrllpgfalvsreallqqhletlrttlpeattldalldlcrinfepwqvrdkpgwlvpipagynalsplylpgevrnardretplrfvenlfglgewlsphrvaalsdllwyhhaepdkglyrwstprfv/lstasVlaferkldpsdalmsagawaqrdasqewpavtvreksqtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqelktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge/lstasVlAferkldpsdalmsagawaqrdasqewpavtvreksvrgtiSNrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLdkgdKKgqkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge/ilstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisNrlktkdrdpakldasiqsPNLQtVdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLdkgdkkgqksktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge/ilstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvRgtisnrlktkdrdpakldasiqsPNLQtVdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLdkgdkkgqkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfgea/lstasVlAferkldpsdalmsagawaqrdasqewpavtvreksvRgtisNrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLdKgdkkgqkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge >6ne0_F: title=STRUCTURE OF DOUBLE-STRANDED TARGET DNA ENGAGED CSY COMPLEX FROM PSEUDOMONAS AERUGINOSA (PA-14) organism=PSEUDOMONAS AERUGINOSA UCBPP-PA14 DNA sequence DC(N43) DT(N42) DT(N41) DC(N40) DG(N39) DA(N38) DC(N37) DG(N36) DT(N35) DG(N34) DG(N33) DA(N32) DA(N31) DG(N30) DT(N29) DG(N28) DC(N27) DC(N26) DG(N25) DC(N24) DC(N23) DC(N22) DG(N21) DA(N20) DA(N19) DC(N18) DT(N17) DA(N16) DC(N15) DA(N14) DG(N13) DG(N12) DC(N11) DG(N10) DC(N9) DA(N8) DG(N7) DA(N6) DT(N5) DG(N4) DG(N3) DA(N2) DC(N1):DA(N2) chainF ( 7) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 15 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LEU252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) VAL354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ilstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvRgtisnrlktkdrdpakldasiqsPNLQtVdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvndqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevarawrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLdkgdkkgqkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfgea >6nj9_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;S-adenosyl-L-methionine-dependent_methyltransferases;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=ACTIVE STATE DOT1L BOUND TO THE H2B-UBIQUITINATED NUCLEOSOME, 2-TO-1 COMPLEX organism=XENOPUS LAEVIS DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdftdlRfqssavalqeaseaylvalfedtnlcaihakrvtipkdiqlarrirgera/akrHrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkVflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/rktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdftdlRfqssavalqeaseaylvalfedtnlcaihakrvtipkdiqlarrirgera/akrHrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkVflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/rktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa >6nj9_H:Histone-fold; title=ACTIVE STATE DOT1L BOUND TO THE H2B-UBIQUITINATED NUCLEOSOME, 2-TO-1 COMPLEX organism=? DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainH ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa >6njq_B:TATA-box_binding_protein-like; title=STRUCTURE OF TBP-HOOGSTEEN CONTAINING DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DT(F215):DA(E214) DG(F216):DC(E213) DC(F217):DG(E212) DC(F218):DG(E211) DC(F219):DG(E210) DG(F220):DC(E209) DT(F221):DA(E208) DT(F222):DA(E207) DT(F223):DA(E206) DA(F224):DT(E205) DT(F225):DA(E204) DA(F226):DT(E203) DG(F227):DC(E202) DC(F228):DG(E201) chainB ( 16) ASN27 0 0 0 0 0 0 0 5 5 0 0 0 0 0 ( 18) VAL29 0 0 0 0 0 0 2 5 0 0 0 0 0 0 ( 46) PHE57 0 0 0 0 4 10 0 0 0 0 0 0 0 0 ( 61) LEU72 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 63) PHE74 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 69) VAL80 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (106) ASN117 0 0 0 0 0 0 0 6 4 0 0 0 0 0 (108) VAL119 0 0 0 0 0 0 0 0 6 2 0 0 0 0 (137) PHE148 0 0 0 0 0 0 0 0 0 0 28 8 0 0 (138) PRO149 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (152) LEU163 0 0 0 0 0 0 0 0 0 3 3 0 0 0 (154) PHE165 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (160) VAL171 0 0 0 0 0 0 0 0 0 5 3 0 0 0 (162) THR173 0 0 0 0 0 0 0 0 8 1 0 0 0 0 prot.sequence vdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >6nkr_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF K289M VARIANT OF DNA POLYMERASE BETA WITH DGTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalemgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6nks_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF K289M VARIANT OF DNA POLYMERASE BETA WITH BETA-GAMMA CHF ANALOG OF DGTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 40 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalemgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6nkt_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF K289M VARIANT OF DNA POLYMERASE BETA WITH BETA-GAMMA DIFLUORO ANALOGUE OF DGTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 43 ( 26) LYS35 0 0 0 0 9 ( 29) ALA38 0 0 0 0 3 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetkfmgvcqlpsdekeyphrridirlipkdqyycgvlyftgsdifnknmrahalemgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6nku_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH "HOT- SPOT SEQUENCE" WITH DGTP organism=Homo sapiens DNA sequence DT(D1):DA(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 39 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 3 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6nkv_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH "HOT- SPOT SEQUENCE" WITH BETA-GAMMA CHF ANALOGUE OF DGTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DA(T5):DT(D1) chainA ( 25) HIS34 0 0 0 0 39 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 3 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6nkw_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH "HOT- SPOT SEQUENCE" WITH BETA-GAMMA-METHYLENE DGTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DA(T5):DT(D1) chainA ( 25) HIS34 0 0 0 0 40 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 3 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6nkx_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF K289M VARIANT OF DNA POLYMERASE BETA WITH "HOT-SPOT SEQUENCE" WITH DGTP organism=Homo sapiens DNA sequence DT(D1):DA(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 39 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 3 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalemgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6nky_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF K289M VARIANT OF DNA POLYMERASE BETA WITH "HOT-SPOT SEQUENCE" WITH BETA-GAMMA CHF ANALOGUE OF DGTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DA(T5):DT(D1) chainA ( 25) HIS34 0 0 0 0 39 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 3 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalemgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6nkz_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF K289M VARIANT OF DNA POLYMERASE BETA WITH "HOT-SPOT SEQUENCE" WITH BETA-GAMMA METHYLENE DGTP organism=Homo sapiens DNA sequence DT(D1):DA(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 38 0 0 0 0 ( 26) LYS35 4 0 0 0 0 ( 29) ALA38 3 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalemgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6nl0_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF K289M VARIANT OF DNA POLYMERASE BETA WITH "HOT-SPOT SEQUENCE" WITH BETA-GAMMA CF2 ANALOGUE OF DGTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DA(T5):DT(D1) chainA ( 25) HIS34 0 0 0 0 38 ( 26) LYS35 0 0 0 0 4 ( 29) ALA38 0 0 0 0 3 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalemgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6nn6_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF DOT1L-H2BK120UB NUCLEOSOME COMPLEX organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DG(I-53):DT(J54) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DC(I-21):DT(J22) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J14) DA(I-14):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DT(I3):DC(J-2) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I22):DG(J-21) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I28):DC(J-27) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH prot.sequence pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/lRDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfg/kTRssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltAeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRKesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageAsrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/nIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aKtrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa >6nog_A:Histone-fold; title=POISED-STATE DOT1L BOUND TO THE H2B-UBIQUITINATED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DG(I50):DT(J99) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge >6nog_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=POISED-STATE DOT1L BOUND TO THE H2B-UBIQUITINATED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DG(I50):DT(J99) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainF chainC chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/niQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akTrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/trKesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/vlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/trkesyaiyvykvlkqvhpdtgisskamSimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsak >6nqa_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;S-adenosyl-L-methionine-dependent_methyltransferases;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=ACTIVE STATE DOT1L BOUND TO THE H2B-UBIQUITINATED NUCLEOSOME, 1-TO-1 COMPLEX organism=XENOPUS LAEVIS DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainC chainB prot.sequence pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdftdlrfqssavalqeaseaylvalfedtnlcaihakrvtipkdiqlarrirger/vLRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/aKAktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/rKEsyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdftdlrfqssavalqeaseaylvalfedtnlcaihakrvtipkdiqlarrirge/akrHrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa >6nsm_A:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=TETR FAMILY TRANSCRIPTIONAL REGULATOR CIFR C99T-C107S-C181R CYSTEINES MUTANT COMPLEXED WITH 26BP DOUBLE-STRAND OPERATOR DNA organism=Pseudomonas aeruginosa DNA sequence DA(D1):DT(C26) DA(D2):DT(C25) DA(D3):DT(C24) DT(D4):DA(C23) DT(D5):DA(C22) DT(D6):DA(C21) DA(D7):DT(C20) DT(D8):DA(C19) DA(D9):DT(C18) DG(D10):DC(C17) DT(D11):DA(C16) DG(D12):DC(C15) DA(D13):DT(C14) DT(D14):DA(C13) DC(D15):DG(C12) DG(D16):DC(C11) DA(D17):DT(C10) DT(D18):DA(C9) DA(D19):DT(C8) DC(D20):DG(C7) DA(D21):DT(C6) DA(D22):DT(C5) DA(D23):DT(C4) DT(D24):DA(C3) DA(D25):DT(C2) DA(D26):DT(C1) chainA ( 2) ARG4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 14 ( 4) ARG6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 13 1 0 0 ( 31) LEU33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 41) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 42) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 ( 43) PRO45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 5 1 0 0 0 0 0 ( 44) SER46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 46) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 prot.sequence tRgRprafdrdtalqramdvfwvrgyegasLaalteameiRPPSlYaafgskeglfrealahylgqhgryrrdvldgapsaregvaellretvarftsdefprgslvvlaaltgtpeseavrdalsaergesirlfrermrrgiadgdlaadtdmeelatfyatvlfglsvqakdrvprerllavveralrawp >6nsm_AB:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=TETR FAMILY TRANSCRIPTIONAL REGULATOR CIFR C99T-C107S-C181R CYSTEINES MUTANT COMPLEXED WITH 26BP DOUBLE-STRAND OPERATOR DNA organism=Pseudomonas aeruginosa DNA sequence DT(C1):DA(D26) DT(C2):DA(D25) DA(C3):DT(D24) DT(C4):DA(D23) DT(C5):DA(D22) DT(C6):DA(D21) DG(C7):DC(D20) DT(C8):DA(D19) DA(C9):DT(D18) DT(C10):DA(D17) DC(C11):DG(D16) DG(C12):DC(D15) DA(C13):DT(D14) DT(C14):DA(D13) DC(C15):DG(D12) DA(C16):DT(D11) DC(C17):DG(D10) DT(C18):DA(D9) DA(C19):DT(D8) DT(C20):DA(D7) DA(C21):DT(D6) DA(C22):DT(D5) DA(C23):DT(D4) DT(C24):DA(D3) DT(C25):DA(D2) DT(C26):DA(D1) chainA ( 2) ARG4 14 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG6 0 0 1 13 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) LEU33 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG43 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) PRO44 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) PRO45 0 0 0 0 0 1 5 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) SER46 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) TYR48 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) ARG6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 2 0 0 ( 29) LEU33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 ( 39) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 40) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 ( 41) PRO45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 6 0 0 0 0 0 0 ( 44) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 prot.sequence tRgRprafdrdtalqramdvfwvrgyegasLaalteameiRPPSlYaafgskeglfrealahylgqhgryrrdvldgapsaregvaellretvarftsdefprgslvvlaaltgtpeseavrdalsaergesirlfrermrrgiadgdlaadtdmeelatfyatvlfglsvqakdrvprerllavveralrawp/gRprafdrdtalqramdvfwvrgyegasLaalteameiRPPslYaafgskeglfrealahylgqhgryrrdvldgapsaregvaellretvarftsdefprgslvvlaaltgtpeseavrdalsaergesirlfrermrrgiadgdlaadtdmeelatfyatvlfglsvqakdrvprerllavveralrawp >6nsn_AB:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=TETR FAMILY TRANSCRIPTIONAL REGULATOR CIFR C99T-C181R CYSTEINES MUTANT COMPLEXED WITH 26BP DOUBLE-STRAND OPERATOR DNA organism=Pseudomonas aeruginosa DNA sequence DA(D1):DT(C26) DA(D2):DT(C25) DA(D3):DT(C24) DT(D4):DA(C23) DT(D5):DA(C22) DT(D6):DA(C21) DA(D7):DT(C20) DT(D8):DA(C19) DA(D9):DT(C18) DG(D10):DC(C17) DT(D11):DA(C16) DG(D12):DC(C15) DA(D13):DT(C14) DT(D14):DA(C13) DC(D15):DG(C12) DG(D16):DC(C11) DA(D17):DT(C10) DT(D18):DA(C9) DA(D19):DT(C8) DC(D20):DG(C7) DA(D21):DT(C6) DA(D22):DT(C5) DA(D23):DT(C4) DT(D24):DA(C3) DA(D25):DT(C2) DA(D26):DT(C1) chainA ( 2) ARG4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 ( 4) ARG6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 12 2 0 0 ( 31) LEU33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 41) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 42) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 ( 43) PRO45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 5 1 0 0 0 0 0 ( 46) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 chainB ( 2) ARG6 0 0 4 13 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU33 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG43 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) PRO44 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PRO45 0 0 0 0 0 1 8 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER46 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TYR48 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRgRprafdrdtalqramdvfwvrgyegasLaalteameiRPPslYaafgskeglfrealahylgqhgryrrdvldgapsaregvaellretvarftsdefprgclvvlaaltgtpeseavrdalsaergesirlfrermrrgiadgdlaadtdmeelatfyatvlfglsvqakdrvprerllavveralrawp/gRprafdrdtalqramdvfwvrgyegasLaalteameiRPPSlYaafgskeglfrealahylgqhgryrrdvldgapsaregvaellretvarftsdefprgclvvlaaltgtpeseavrdalsaergesirlfrermrrgiadgdlaadtdmeelatfyatvlfglsvqakdrvprerllavveralrawp >6nsn_B:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=TETR FAMILY TRANSCRIPTIONAL REGULATOR CIFR C99T-C181R CYSTEINES MUTANT COMPLEXED WITH 26BP DOUBLE-STRAND OPERATOR DNA organism=Pseudomonas aeruginosa DNA sequence DA(D1):DT(C26) DA(D2):DT(C25) DA(D3):DT(C24) DT(D4):DA(C23) DT(D5):DA(C22) DT(D6):DA(C21) DA(D7):DT(C20) DT(D8):DA(C19) DA(D9):DT(C18) DG(D10):DC(C17) DT(D11):DA(C16) DG(D12):DC(C15) DA(D13):DT(C14) DT(D14):DA(C13) DC(D15):DG(C12) DG(D16):DC(C11) DA(D17):DT(C10) DT(D18):DA(C9) DA(D19):DT(C8) DC(D20):DG(C7) DA(D21):DT(C6) DA(D22):DT(C5) DA(D23):DT(C4) DT(D24):DA(C3) DA(D25):DT(C2) DA(D26):DT(C1) chainB ( 2) ARG6 0 0 4 13 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU33 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG43 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) PRO44 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PRO45 0 0 0 0 0 1 8 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER46 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TYR48 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gRprafdrdtalqramdvfwvrgyegasLaalteameiRPPSlYaafgskeglfrealahylgqhgryrrdvldgapsaregvaellretvarftsdefprgclvvlaaltgtpeseavrdalsaergesirlfrermrrgiadgdlaadtdmeelatfyatvlfglsvqakdrvprerllavveralrawp >6nsr_AB:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=TETR FAMILY TRANSCRIPTIONAL REGULATOR CIFR C99T-C181R CYSTEINE MUTANT COMPLEXED WITH 26BP DOUBLE-STRAND OPERATOR DNA AND APO-CIFR C99T- C181R organism=Pseudomonas aeruginosa DNA sequence DA(D1):DT(C26) DA(D2):DT(C25) DA(D3):DT(C24) DT(D4):DA(C23) DT(D5):DA(C22) DT(D6):DA(C21) DA(D7):DT(C20) DT(D8):DA(C19) DA(D9):DT(C18) DG(D10):DC(C17) DT(D11):DA(C16) DG(D12):DC(C15) DA(D13):DT(C14) DT(D14):DA(C13) DC(D15):DG(C12) DG(D16):DC(C11) DA(D17):DT(C10) DT(D18):DA(C9) DA(D19):DT(C8) DC(D20):DG(C7) DA(D21):DT(C6) DA(D22):DT(C5) DA(D23):DT(C4) DT(D24):DA(C3) DA(D25):DT(C2) DA(D26):DT(C1) chainA ( 2) ARG6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 3 0 0 ( 29) LEU33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 39) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 40) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 ( 41) PRO45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 9 1 0 0 0 0 0 ( 42) SER46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 44) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 chainB ( 1) ARG6 0 0 4 12 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU33 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO44 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) PRO45 0 0 0 0 0 1 8 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER46 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR48 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gRprafdrdtalqramdvfwvrgyegasLaalteameiRPPSlYaafgskeglfrealahylgqhgryrrdvldgapsaregvaellretvarftsdefprgclvvlaaltgtpeseavrdalsaergesirlfrermrrgiadgdlaadtdmeelatfyatvlfglsvqakdrvprerllavveralrawp/RprafdrdtalqramdvfwvrgyegasLaalteameirPPSlYaafgskeglfrealahylgqhgryrrdvldgapsaregvaellretvarftsdefprgclvvlaaltgtpeseavrdalsaergesirlfrermrrgiadgdlaadtdmeelatfyatvlfglsvqakdrvprerllavveralrawp >6ny1_Y: title=CASX-GRNA-DNA(30BP) STATE II organism=DELTAPROTEOBACTERIA BACTERIUM DNA sequence DT(C14):DA(D17) DG(C15):DC(D16) DC(C16):DG(D15) DA(C17):DT(D14) DG(C18):DC(D13) DG(C19):DC(D12) DA(C20):DT(D11) DT(C21):DA(D10) DG(C22):DC(D9) DA(C23):DT(D8) DA(C24):DT(D7) DA(C25):DT(D6) DT(C26):DA(D5) DC(C27):DG(D4) DC(C28):DG(D3) DC(C29):DG(D2) DG(C30):DC(D1) chainY ( 22) ARG23 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 26) MET27 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 (126) ALA130 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (130) ALA134 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (131) ALA135 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ARG191 0 0 0 0 0 0 4 34 0 0 0 0 0 0 0 0 0 (170) TYR196 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 (200) LYS226 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 0 0 (204) ASP230 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (212) SER238 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) LYS242 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (488) SER521 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (494) GLN527 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (495) TYR528 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 (595) ARG628 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ekrinkirkklsadnatkpvsRsgpMktllvrvmtddlkkrlekrrkkpevmpqvisnnaannlrmllddytkmkeailqvywqefkddhvglmckfaqpasxxxxxxxxxxxxxxxxxxxxxxxXxxxXXxxxxxxxxxxxxxxxxxxxxxxxxxxxxgkfgqRaldfYsihvtkesthpvkplaqiagnryasgpvgKalsDacmgtiaSflsKyqdiiiehqkvvkgnqkrleslrelagkenleypsvtlppqphtkegvdayneviarvrmwvnlnlwqklklsrddakpllrlkgfpsfpvverrenevdwwntinevkklidakrdmgrvfwsgvtaekrntilegynylpnendhkkrenpkkpakrqfgdlllylekkywgkvfdeaweridkkiagltshiereearnaedaqskavltdwlrakasfvlerlkemdekefyaceiqlqkwygdlrgnpfaveaenrvvdisgfsigSdghsiQYrnllawkylengkrefyllmnygkkgrirftdgtdikksgkwqgllygggkakvidltfdpddeqliilplafgtrqgrefiwndllsletgliklangRviektiynkkigrdepalfvaltferrevvdpsnikpvnligvargenipavialtdpegcplrigegykekqraiqaakeveqrraggysrkfasksrnladdmvrnsardlfyhavthdavlvfanlsrgfqytkmedwltaklayegltsktylsktlaqytsktcsncgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxrfshrpvqeqfvcldcghevhaaeqaalniarswlflnsnstefksyksgkqpfvgawqafykrrlkevwk >6ny2_Y: title=CASX-GRNA-DNA(45BP) STATE I organism=DELTAPROTEOBACTERIA BACTERIUM DNA sequence DC(D1):DG(C30) DG(D2):DC(C29) DG(D3):DC(C28) DG(D4):DC(C27) DA(D5):DT(C26) DT(D6):DA(C25) DT(D7):DA(C24) DT(D8):DA(C23) DC(D9):DG(C22) DA(D10):DT(C21) DT(D11):DA(C20) DC(D12):DG(C19) DC(D13):DG(C18) DT(D14):DA(C17) DG(D15):DC(C16) DC(D16):DG(C15) DA(D17):DT(C14) DG(D18):DC(C13) DC(D19):DG(C12) DA(D20):DT(C11) DT(D21):DC(C10) DC(D22):DT(C9) DC(D23):DT(C8) DC(D24):DT(C7) DC(D25):DT(C6) DG(D26):DA(C5) DA(D27):DG(C4) DC(D28):DT(C3) DC(D29):DT(C2) DC(D30):DT(C1) DG(D31):DC(C0) DT(D32):DA(C-1) chainY ( 26) MET27 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR29 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) ALA131 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ALA135 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) LYS187 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ARG191 0 0 0 0 0 0 0 0 0 56 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) TYR196 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) LYS226 0 0 0 0 0 0 0 6 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) SER238 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) LYS242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) ASN305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 (280) LEU306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (284) GLN310 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (459) GLN492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 (488) SER521 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (494) GLN527 0 0 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) TYR528 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (595) ARG628 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (618) THR651 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (724) LEU771 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (728) PHE775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 14 0 0 0 0 0 0 0 0 0 0 (730) ARG777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 (737) MET784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (742) TYR789 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (769) ALA816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (770) GLN817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (808) ALA876 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 (813) ALA881 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (840) ALA908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (852) GLN920 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 prot.sequence ekrinkirkklsadnatkpvsrsgpMkTllvrvmtddlkkrlekrrkkpevmpqvisnnaannlrmllddytkmkeailqvywqefkddhvglmckfaqpasxxxxxxxxxxxxxxxxxxxxxxxxXxxxXxxxxxxxxxxxxxxxxxxxxxxxxxxxxgKfgqRaldfYsihvtkesthpvkplaqiagnryasgpvgKalsdacmgtiaSflsKyqdiiiehqkvvkgnqkrleslrelagkenleypsvtlppqphtkegvdayneviarvrmwvNLnlwQklklsrddakpllrlkgfpsfpvverrenevdwwntinevkklidakrdmgrvfwsgvtaekrntilegynylpnendhkkrenpkkpakrqfgdlllylekkywgkvfdeaweridkkiagltshiereearnaedaqskavltdwlrakasfvlerlkemdekefyaceiqlQkwygdlrgnpfaveaenrvvdisgfsigSdghsiQYrnllawkylengkrefyllmnygkkgrirftdgtdikksgkwqgllygggkakvidltfdpddeqliilplafgtrqgrefiwndllsletgliklangRviektiynkkigrdepalfvalTferrevvdpsnikpvnligvargenipavialtdpegcplrigegykekqraiqaakeveqrraggysrkfasksrnladdmvrnsardlfyhavthdavlvfanLsrgFgRqgkrtfMterqYtkmedwltaklayegltsktylsktlAQytsktcsncgxxxxxxxxxxxxxxxxxxxxxxxxxxxXxxxxXxxxxxxxxxxxxxxxxxxxxxxxxxxXxxxxrfshrpvQeqfvcldcghevhaaeqaalniarswlflnsnstefksyksgkqpfvgawqafykrrlkevwk >6ny3_Y: title=CASX TERNARY COMPLEX WITH 30BP TARGET DNA organism=DELTAPROTEOBACTERIA BACTERIUM DNA sequence DT(C7):DC(D24) DT(C8):DC(D23) DT(C9):DC(D22) DC(C10):DT(D21) DT(C11):DA(D20) DG(C12):DC(D19) DC(C13):DG(D18) DT(C14):DA(D17) DG(C15):DC(D16) DC(C16):DG(D15) DA(C17):DT(D14) DG(C18):DC(D13) DG(C19):DC(D12) DA(C20):DT(D11) DT(C21):DA(D10) DG(C22):DC(D9) DA(C23):DT(D8) DA(C24):DT(D7) DA(C25):DT(D6) DT(C26):DA(D5) DC(C27):DG(D4) DC(C28):DG(D3) DC(C29):DG(D2) DG(C30):DC(D1) chainY ( 22) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 26) MET27 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 ( 99) GLN100 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 (102) SER103 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (127) ALA131 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ALA135 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ARG191 0 0 0 0 0 0 0 0 0 0 0 0 0 3 19 0 0 0 0 0 0 0 0 0 (170) TYR196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 (200) LYS226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 7 3 0 0 0 0 0 0 (204) ASP230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (212) SER238 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) LYS242 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (459) GLN492 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) SER515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (488) SER521 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 (494) GLN527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 (495) TYR528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 (595) ARG628 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 (618) THR651 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (724) LEU771 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (728) PHE775 0 0 16 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (730) ARG777 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (737) MET784 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (742) TYR789 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (770) GLN817 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (852) GLN920 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ekrinkirkklsadnatkpvsRsgpMktllvrvmtddlkkrlekrrkkpevmpqvisnnaannlrmllddytkmkeailqvywqefkddhvglmckfaQpaSxxxxxxxxxxxxxxxxxxxxxxxxXxxxXxxxxxxxxxxxxxxxxxxxxxxxxxxxxgkfgqRaldfYsihvtkesthpvkplaqiagnryasgpvgKalsDacmgtiaSflsKyqdiiiehqkvvkgnqkrleslrelagkenleypsvtlppqphtkegvdayneviarvrmwvnlnlwqklklsrddakpllrlkgfpsfpvverrenevdwwntinevkklidakrdmgrvfwsgvtaekrntilegynylpnendhkkrenpkkpakrqfgdlllylekkywgkvfdeaweridkkiagltshiereearnaedaqskavltdwlrakasfvlerlkemdekefyaceiqlQkwygdlrgnpfaveaenrvvdiSgfsigSdghsiQYrnllawkylengkrefyllmnygkkgrirftdgtdikksgkwqgllygggkakvidltfdpddeqliilplafgtrqgrefiwndllsletgliklangRviektiynkkigrdepalfvalTferrevvdpsnikpvnligvargenipavialtdpegcplrigegykekqraiqaakeveqrraggysrkfasksrnladdmvrnsardlfyhavthdavlvfanLsrgFgRqgkrtfMterqYtkmedwltaklayegltsktylsktlaQytsktcsncgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxrfshrpvQeqfvcldcghevhaaeqaalniarswlflnsnstefksyksgkqpfvgawqafykrrlkevwk >6nzo_C:Histone-fold; title=SET2 BOUND TO NUCLEOSOME organism=? DNA sequence DC(J2):DG(I146) DA(J3):DT(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DC(J145):DG(I3) DA(J146):DT(I2) chainC ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence grssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk >6o0z_A: title=CONFORMATIONAL STATES OF CAS9-SGRNA-DNA TERNARY COMPLEX IN THE PRESENCE OF MAGNESIUM organism=STREPTOCOCCUS PYOGENES DNA sequence DT(D31):DA(C10) DG(D32):DC(C9) DG(D33):DC(C8) DC(D34):DG(C7) DG(D35):DC(C6) DA(D36):DT(C5) DT(D37):DA(C4) DT(D38):DA(C3) DA(D39):DT(C2) DG(D40):DC(C1) chainA (1029) LYS1107 4 5 0 0 0 0 0 0 0 0 (1255) ARG1333 6 9 2 0 0 0 0 0 0 0 (1257) ARG1335 0 8 11 2 0 0 0 0 0 0 prot.sequence kkysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpddvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqidlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyaflsgeqkkaivdllfktnrkvtvkqlkedyfkkieaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirktildflksnrnfmqlihddsltfkediqkaqdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarrmkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdhivpqlkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvykvydvrkmiyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagelqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >6o19_A:Zn2/Cys6_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PHO7 COMPLEX WITH PHO1 PROMOTER SITE 2 organism=Schizosaccharomyces pombe DNA sequence DT(C1):DA(B19) DT(C2):DA(B18) DA(C3):DT(B17) DT(C4):DA(B16) DT(C5):DA(B15) DC(C6):DG(B14) DG(C7):DC(B13) DG(C8):DC(B12) DA(C9):DT(B11) DA(C10):DT(B10) DA(C11):DT(B9) DT(C12):DA(B8) DT(C13):DA(B7) DA(C14):DT(B6) DA(C15):DT(B5) DA(C16):DT(B4) DA(C17):DT(B3) DA(C18):DT(B2) DC(C19):DG(B1) chainA ( 10) GLN287 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 21) ASP298 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ASN299 0 0 0 0 0 10 7 17 0 0 0 0 0 0 0 0 0 0 0 ( 23) LYS300 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG326 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 0 0 0 0 ( 55) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 4 3 7 0 0 0 0 ( 58) TYR335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 2 0 0 prot.sequence sgkvkkRlpQakracakcqkDNKkcddarpcqrcikaktdcidlprkkRptgvrRgpYk >6o1d_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE CENTROMERIC NUCLEOSOME WITH NATIVE ALPHA SATELLITE DNA organism=HOMO SAPIENS DNA sequence DA(J1):DT(I145) DT(J2):DA(I144) DC(J3):DG(I143) DA(J4):DT(I142) DG(J5):DC(I141) DG(J6):DC(I140) DA(J7):DT(I139) DA(J8):DT(I138) DG(J9):DC(I137) DT(J10):DA(I136) DT(J11):DA(I135) DC(J12):DG(I134) DA(J13):DT(I133) DT(J14):DA(I132) DA(J15):DT(I131) DT(J16):DA(I130) DA(J17):DT(I129) DA(J18):DT(I128) DA(J19):DT(I127) DA(J20):DT(I126) DG(J21):DC(I125) DG(J22):DC(I124) DC(J23):DG(I123) DA(J24):DT(I122) DA(J25):DT(I121) DA(J26):DT(I120) DC(J27):DG(I119) DG(J28):DC(I118) DG(J29):DC(I117) DA(J30):DT(I116) DA(J31):DT(I115) DG(J32):DC(I114) DC(J33):DG(I113) DA(J34):DT(I112) DT(J35):DA(I111) DT(J36):DA(I110) DC(J37):DG(I109) DT(J38):DA(I108) DC(J39):DG(I107) DA(J40):DT(I106) DG(J41):DC(I105) DA(J42):DT(I104) DA(J43):DT(I103) DT(J44):DA(I102) DA(J45):DT(I101) DT(J46):DA(I100) DT(J47):DA(I99) DC(J48):DG(I98) DT(J49):DA(I97) DT(J50):DA(I96) DT(J51):DA(I95) DG(J52):DC(I94) DT(J53):DA(I93) DG(J54):DC(I92) DA(J55):DT(I91) DT(J56):DA(I90) DG(J57):DC(I89) DA(J58):DT(I88) DT(J59):DA(I87) DG(J60):DC(I86) DG(J61):DC(I85) DA(J62):DT(I84) DG(J63):DC(I83) DT(J64):DA(I82) DT(J65):DA(I81) DT(J66):DA(I80) DC(J67):DG(I79) DA(J68):DT(I78) DC(J69):DG(I77) DT(J70):DA(I76) DC(J71):DG(I75) DA(J72):DT(I74) DC(J73):DG(I73) DA(J74):DT(I72) DG(J75):DC(I71) DA(J76):DT(I70) DG(J77):DC(I69) DC(J78):DG(I68) DT(J79):DA(I67) DG(J80):DC(I66) DA(J81):DT(I65) DA(J82):DT(I64) DC(J83):DG(I63) DA(J84):DT(I62) DT(J85):DA(I61) DG(J86):DC(I60) DC(J87):DG(I59) DC(J88):DG(I58) DT(J89):DA(I57) DT(J90):DA(I56) DT(J91):DA(I55) DT(J92):DA(I54) DG(J93):DC(I53) DA(J94):DT(I52) DT(J95):DA(I51) DG(J96):DC(I50) DG(J97):DC(I49) DA(J98):DT(I48) DG(J99):DC(I47) DC(J100):DG(I46) DA(J101):DT(I45) DG(J102):DC(I44) DT(J103):DA(I43) DT(J104):DA(I42) DT(J105):DA(I41) DC(J106):DG(I40) DC(J107):DG(I39) DA(J108):DT(I38) DA(J109):DT(I37) DA(J110):DT(I36) DT(J111):DA(I35) DA(J112):DT(I34) DC(J113):DG(I33) DA(J114):DT(I32) DC(J115):DG(I31) DT(J116):DA(I30) DT(J117):DA(I29) DT(J118):DA(I28) DT(J119):DA(I27) DG(J120):DC(I26) DG(J121):DC(I25) DT(J122):DA(I24) DA(J123):DT(I23) DG(J124):DC(I22) DA(J125):DT(I21) DA(J126):DT(I20) DT(J127):DA(I19) DC(J128):DG(I18) DT(J129):DA(I17) DG(J130):DC(I16) DC(J131):DG(I15) DA(J132):DT(I14) DG(J133):DC(I13) DG(J134):DC(I12) DT(J135):DA(I11) DG(J136):DC(I10) DG(J137):DC(I9) DA(J138):DT(I8) DT(J139):DA(I7) DA(J140):DT(I6) DT(J141):DA(I5) DT(J142):DA(I4) DG(J143):DC(I3) DA(J144):DT(I2) DT(J145):DA(I1) chainA ( 2) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rRrqgwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleeglg/rDniqgitkpairrlarrggvkrIsgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavll/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/rRrqgwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleeglg/rDniqgitkpairrlarrggvkrIsgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavll/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6o3t_AB:"Winged_helix"_DNA-binding_domain; title=STRUCTURAL BASIS OF FOXC2 AND DNA INTERACTIONS organism=Homo sapiens DNA sequence DA(C3):DT(D21) DT(C4):DA(D20) DT(C5):DA(D19) DG(C6):DC(D18) DT(C7):DA(D17) DT(C8):DA(D16) DT(C9):DA(D15) DA(C10):DT(D14) DT(C11):DA(D13) DA(C12):DT(D12) DA(C13):DT(D11) DA(C14):DT(D10) DC(C15):DG(D9) DA(C16):DT(D8) DG(C17):DC(D7) DC(C18):DG(D6) DC(C19):DG(D5) DC(C20):DG(D4) DG(C21):DC(D3) chainA ( 49) ASN118 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER119 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG121 0 0 10 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) HIS122 0 0 0 0 0 9 10 12 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER125 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LYS142 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 43) ASN118 0 0 0 0 0 0 0 0 0 1 12 1 0 0 0 0 0 0 0 ( 44) SER119 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 46) ARG121 0 0 0 0 0 0 0 0 0 0 0 2 9 7 0 0 0 0 0 ( 47) HIS122 0 0 0 0 0 0 0 0 15 11 8 0 0 0 0 0 0 0 0 ( 50) SER125 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 ( 51) LEU126 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence lvkppysyialitmaiqnapekkitlngiyqfimdrfpfyrenkqgwqNSiRHnlSlnecfvkvprddkkpgKgsywtldpdsynmfengsflrr/ppysyialitmaiqnkkitlngiyqfimdrfpfyrenkqgwqNSiRHnlSLnecfvkvpgsywtl >6o3t_B:"Winged_helix"_DNA-binding_domain; title=STRUCTURAL BASIS OF FOXC2 AND DNA INTERACTIONS organism=Homo sapiens DNA sequence DA(C3):DT(D21) DT(C4):DA(D20) DT(C5):DA(D19) DG(C6):DC(D18) DT(C7):DA(D17) DT(C8):DA(D16) DT(C9):DA(D15) DA(C10):DT(D14) DT(C11):DA(D13) DA(C12):DT(D12) DA(C13):DT(D11) DA(C14):DT(D10) DC(C15):DG(D9) DA(C16):DT(D8) DG(C17):DC(D7) DC(C18):DG(D6) DC(C19):DG(D5) DC(C20):DG(D4) DG(C21):DC(D3) chainB ( 43) ASN118 0 0 0 0 0 0 0 0 0 1 12 1 0 0 0 0 0 0 0 ( 44) SER119 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 46) ARG121 0 0 0 0 0 0 0 0 0 0 0 2 9 7 0 0 0 0 0 ( 47) HIS122 0 0 0 0 0 0 0 0 15 11 8 0 0 0 0 0 0 0 0 ( 50) SER125 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 ( 51) LEU126 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence ppysyialitmaiqnkkitlngiyqfimdrfpfyrenkqgwqNSiRHnlSLnecfvkvpgsywtl >6o6c_ABD: title=RNA POLYMERASE II ELONGATION COMPLEX ARRESTED AT A CPD LESION organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(L31):DC(M17) DG(L32):DC(M16) DA(L33):DT(M15) DG(L34):DC(M14) DA(L35):DT(M13) DA(L36):DT(M12) DG(L37):DC(M11) DG(L38):DC(M10) DA(L39):DT(M9) DG(L40):DC(M8) DC(L41):DG(M7) DA(L42):DT(M6) DG(L43):DC(M5) DA(L44):DT(M4) DG(L45):DC(M3) DC(L46):DG(M2) chainA (1352) ARG1386 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainD prot.sequence saplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyypdihdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkympeqkiteiedgqdggvtpysnesglv/fedesapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhttesdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidvpgrelkyeliaeeseddsesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveeahdfnmklainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpispdeeelgqrtayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrsrdf/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >6o6p_AB:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=STRUCTURE OF THE REGULATOR FASR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH DNA organism=Mycobacterium tuberculosis DNA sequence DT(D1):DA(C25) DA(D2):DT(C24) DC(D3):DG(C23) DT(D4):DA(C22) DG(D5):DC(C21) DG(D6):DC(C20) DC(D7):DG(C19) DG(D8):DC(C18) DA(D9):DT(C17) DG(D10):DC(C16) DT(D11):DA(C15) DT(D12):DA(C14) DC(D13):DG(C13) DT(D14):DA(C12) DA(D15):DT(C11) DC(D16):DG(C10) DG(D17):DC(C9) DT(D18):DA(C8) DA(D19):DT(C7) DC(D20):DG(C6) DG(D21):DC(C5) DG(D22):DC(C4) DG(D23):DC(C3) chainA ( 36) SER72 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS73 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PRO74 0 0 0 0 0 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR77 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 35) SER72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 ( 36) LYS73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 2 0 0 0 0 0 ( 37) PRO74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 ( 40) TYR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 prot.sequence rderrgqllvvasdvfvdrgyhaagmdeiadragvSKPvlYqhfssklelylavlhrhvenlvsgvhqalstttdnrqrlhvavqaffdfiehdsqgyrlifendfvtepevaaqvrvatescidavfalisadsgldphrarmiavglvgmsvdcarywldadkpisksdavegtvqfawgglshvp/derrgqllvvasdvfvdrgyhaagmdeiadragvSKPvlYqhfssklelylavlhrhvenlvsgvhqalstttdnrqrlhvavqaffdfiehdsqgyrlifendfvtepevaaqvrvatescidavfalisadsgldphrarmiavglvgmsvdcarywldadkpisksdavegtvqfawgglshvp >6o6p_B:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=STRUCTURE OF THE REGULATOR FASR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH DNA organism=Mycobacterium tuberculosis DNA sequence DC(C3):DG(D23) DC(C4):DG(D22) DC(C5):DG(D21) DG(C6):DC(D20) DT(C7):DA(D19) DA(C8):DT(D18) DC(C9):DG(D17) DG(C10):DC(D16) DT(C11):DA(D15) DA(C12):DT(D14) DG(C13):DC(D13) DA(C14):DT(D12) DA(C15):DT(D11) DC(C16):DG(D10) DT(C17):DA(D9) DC(C18):DG(D8) DG(C19):DC(D7) DC(C20):DG(D6) DC(C21):DG(D5) DA(C22):DT(D4) DG(C23):DC(D3) DT(C24):DA(D2) DA(C25):DT(D1) chainB ( 35) SER72 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) LYS73 0 0 0 0 0 2 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO74 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR77 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence derrgqllvvasdvfvdrgyhaagmdeiadragvSKPvlYqhfssklelylavlhrhvenlvsgvhqalstttdnrqrlhvavqaffdfiehdsqgyrlifendfvtepevaaqvrvatescidavfalisadsgldphrarmiavglvgmsvdcarywldadkpisksdavegtvqfawgglshvp >6o8e_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF UVRB BOUND TO DUPLEX DNA WITH ADP organism=Bacillus caldotenax DNA sequence DG(D1):DC(C20) DC(D2):DG(C19) DC(D3):DG(C18) DG(D4):DC(C17) DT(D5):DA(C16) DA(D6):DT(C15) DT(D7):DA(C14) DG(D8):DC(C13) DC(D9):DT(C12) DC(D10):DT(C11) DA(D11):DT(C10) DA(D12):DT(C9) DT(D13):DA(C8) DC(D14):DG(C7) DT(D15):DA(C6) DA(D16):DT(C5) DG(D17):DC(C4) DA(D18):DT(C3) DG(D19):DC(C2) DC(D20):DG(C1) chainA ( 90) SER91 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 92) TYR93 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 94) TYR95 0 0 0 0 0 0 7 51 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) TYR96 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 ( 96) GLN97 0 0 0 0 0 0 0 0 0 18 16 0 0 0 0 0 0 0 0 0 ( 97) PRO98 0 0 0 0 0 0 0 0 8 0 16 0 0 0 0 0 0 0 0 0 (108) ILE109 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (111) ASP112 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 (113) LYS114 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ILE115 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) TYR146 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (248) PHE249 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 (250) CYS251 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (301) PHE302 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (305) ILE306 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (306) GLU307 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (309) SER310 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (345) GLN346 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (349) MET350 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 (356) ARG357 0 0 0 0 0 0 0 0 2 0 4 0 0 0 0 0 0 0 0 0 (526) PHE527 0 0 0 0 0 0 0 0 0 0 0 0 0 10 13 0 0 0 0 0 prot.sequence egrfqlvapyepqgdqpqaiaklvdglrrgvkhqtllgatgtgktftisnviaqvnkptlviahnktlagqlyselkeffphnaveyfvSyYdYYQPeayvpqtdtyIekDaKIndeidklrhsatsalferrdviivasvssiYglgspeeyrelvvslrvgmeiernallrrlvdiqydrndidfrrgtfrvrgdvveifpasrdehsirveffgdeierirevdaltgevlgerehvaifpashFvCreekmrlaiqnieqeleerlaelraqgklleaqrleqrtrydlemmremgFssgIEnySrhlalrppgstpytlldyfpddfliivdeshvtlpQlrgMyngdraRkqvlvdhgfrlpsaldnrpltfeefeqkinqiiyvsatpgpyelehspgvveqiirptglldptidvrptkgqiddligeirervernertlvttltkkmaedltdylkeagikvaylhseiktlerieiirdlrlgkydvlvginllregldipevslvaildadkegFlrsersliqtigraarnanghvimyadtitksmeiaiqetkrrraiqeeynrkhgivprtvkkeir >6o8f_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF UVRB BOUND TO DUPLEX DNA organism=Bacillus caldotenax DNA sequence DG(D1):DC(C20) DC(D2):DG(C19) DC(D3):DG(C18) DG(D4):DC(C17) DT(D5):DA(C16) DA(D6):DT(C15) DT(D7):DA(C14) DG(D8):DC(C13) DC(D9):DT(C12) DC(D10):DT(C11) DA(D11):DT(C10) DA(D12):DT(C9) DT(D13):DA(C8) DC(D14):DG(C7) DT(D15):DA(C6) DA(D16):DT(C5) DG(D17):DC(C4) DA(D18):DT(C3) DG(D19):DC(C2) DC(D20):DG(C1) chainA ( 89) SER91 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 91) TYR93 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 ( 93) TYR95 0 0 0 0 0 0 7 45 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) TYR96 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 ( 95) GLN97 0 0 0 0 0 0 0 0 0 21 9 0 0 0 0 0 0 0 0 0 ( 96) PRO98 0 0 0 0 0 0 0 0 6 0 14 0 0 0 0 0 0 0 0 0 (107) ILE109 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (110) ASP112 0 0 0 0 0 0 1 0 0 3 0 0 0 0 0 0 0 0 0 0 (112) LYS114 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ILE115 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) TYR146 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (247) PHE249 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 (249) CYS251 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (300) PHE302 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (304) ILE306 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (305) GLU307 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (308) SER310 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (344) GLN346 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 (348) MET350 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 (355) ARG357 0 0 0 0 0 0 0 0 4 0 5 0 0 0 0 0 0 0 0 0 (478) LYS480 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (525) PHE527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 prot.sequence grfqlvapyepqgdqpqaiaklvdglrrgvkhqtllgatgtgktftisnviaqvnkptlviahnktlagqlyselkeffphnaveyfvSyYdYYQPeayvpqtdtyIekDaKIndeidklrhsatsalferrdviivasvssiYglgspeeyrelvvslrvgmeiernallrrlvdiqydrndidfrrgtfrvrgdvveifpasrdehsirveffgdeierirevdaltgevlgerehvaifpashFvCreekmrlaiqnieqeleerlaelraqgklleaqrleqrtrydlemmremgFssgIEnySrhlalrppgstpytlldyfpddfliivdeshvtlpQlrgMyngdraRkqvlvdhgfrlpsaldnrpltfeefeqkinqiiyvsatpgpyelehspgvveqiirptglldptidvrptkgqiddligeirervernertlvttltkkmaedltdylkeagikvaylhseiKtlerieiirdlrlgkydvlvginllregldipevslvaildadkegFlrsersliqtigraarnanghvimyadtitksmeiaiqetkrrraiqeeynrkhgivprtvkkeir >6o8g_C:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF UVRB BOUND TO FULLY DUPLEX DNA organism=Bacillus caldotenax DNA sequence DT(H1):DA(I16) DC(H2):DG(I15) DT(H3):DA(I14) DC(H4):DG(I13) DC(H5):DG(I12) DA(H6):DT(I11) DT(H7):DA(I10) DC(H8):DG(I9) DG(H9):DC(I8) DC(H10):DG(I7) DG(H11):DC(I6) DC(H12):DG(I5) DT(H13):DA(I4) DA(H14):DT(I3) DC(H15):DG(I2) chainC (321) GLN346 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (325) MET350 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (332) ARG357 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 (478) ASN503 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (502) PHE527 0 0 0 28 48 0 0 0 0 0 0 0 0 0 0 prot.sequence grfqlvapyepqgdqpqaiaklvdglrrgvkhqtllgatgtgktftisnviaqvnkptlviahnktlagqlyselkeffphnaveyfvcyydykindeidklrhsatsalferrdviivasvssiyglgspeeyrelvvslrvgmeiernallrrlvdiqydrndidfrrgtfrvrgdvveifpasrdehsirveffgdeierirevdaltgevlgerehvaifpashfvtreekmrlaiqnieqeleerlaelraqgklleaqrleqrtrydlemmssgienysrhlalrppgstpytlldyfpddfliivdeshvtlpQlrgMyngdraRkqvlvdhgfrlpsaldnrpltfeefeqkinqiiyvsatpgpyelehspgvveqiirptglldptidvrptkgqiddligeirervernertlvttltkkmaedltdylkeagikvaylhseiktlerieiirdlrlgkydvlvgiNllregldipevslvaildadkegFlrsersliqtigraarnanghvimyadtitksmeiaiqetkrrraiqeeynrkhgivp >6o8h_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF UVRB MUTANT BOUND TO DUPLEX DNA organism=Bacillus caldotenax DNA sequence DA(C4):DT(B13) DG(C5):DC(B12) DC(C6):DG(B11) DG(C7):DC(B10) DC(C8):DG(B9) DG(C9):DC(B8) DA(C10):DT(B7) DT(C11):DA(B6) DG(C12):DC(B5) DG(C13):DC(B4) chainA (335) ARG357 0 0 0 3 3 0 0 0 0 0 (505) ALA527 0 0 0 0 0 0 0 0 4 1 prot.sequence vegrfqlvapyepqgdqpqaiaklvdglrrgvkhqtllgatgtgktftisnviaqvnkptlviahnktlagqlyselkeffphnaveyfvcyakindeidklrhsatsalferrdviivasvssiyglgspeeyrelvvslrvgmeiernallrrlvdiqydrndidfrrgtfrvrgdvveifpasrdehsirveffgdeierirevdaltgevlgerehvaifpashfvtreekmrlaiqnieqeleerlaelraqgklleaqrleqrtrydlemmremssgienysrhlalrppgstpytlldyfpddfliivdeshvtlpqlrgmyngdraRkqvlvdhgfrlpsaldnrpltfeefeqkinqiiyvsatpgpyelehspgvveqiirptglldptidvrptkgqiddligeirervernertlvttltkkmaedltdylkeagikvaylhseiktlerieiirdlrlgkydvlvginllregldipevslvaildadkegAlrsersliqtigraarnanghvimyadtitksmeiaiqetkrrraiqeeynrkhgivprtvkkeir >6o96_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=DOT1L BOUND TO THE H2BK120 UBIQUITINATED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DG(J72):DC(I76) DA(J73):DT(I75) DA(J74):DT(I74) DT(J75):DA(I73) DC(J76):DG(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa/kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/hrKVLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvfleNvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akAKTrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyLtaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa >6o96_D:Histone-fold; title=DOT1L BOUND TO THE H2BK120 UBIQUITINATED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DG(J72):DC(I76) DA(J73):DT(I75) DA(J74):DT(I74) DT(J75):DA(I73) DC(J76):DG(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa >6o9e_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA AND INDOPY-1 organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DA(E1):DT(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 89) GLU89 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwgltpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrQlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6o9e_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA AND INDOPY-1 organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DA(F1):DT(F33) OMC(F2):DG(F32) DC(F3):DG(F31) OMC(F4):DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) chainC ( 89) GLU89 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwgpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskLlrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwy >6o9l_7AMNPT:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN HOLO-PIC IN THE CLOSED STATE organism=HOMO SAPIENS DNA sequence DC(Y29):DG(X65) DG(Y30):DC(X64) DG(Y31):DC(X63) DC(Y32):DG(X62) DC(Y34):DG(X60) DG(Y35):DC(X59) DA(Y36):DT(X58) DT(Y38):DA(X56) DG(Y39):DC(X55) DT(Y40):DA(X54) DT(Y41):DA(X53) DC(Y42):DG(X52) DG(Y43):DC(X51) DT(Y45):DA(X49) DC(Y46):DG(X48) DG(Y47):DC(X47) DC(Y48):DG(X46) DG(Y49):DC(X45) DA(Y50):DT(X44) DC(Y51):DG(X43) DT(Y52):DA(X42) DG(Y53):DC(X41) DG(Y55):DC(X39) DG(Y56):DC(X38) DA(Y57):DT(X37) DC(Y58):DG(X36) DG(Y59):DC(X35) DA(Y60):DT(X34) DA(Y61):DT(X33) DC(Y62):DG(X32) DG(Y63):DC(X31) DC(Y64):DG(X30) DG(Y65):DC(X29) DC(Y66):DG(X28) DC(Y68):DG(X26) DC(Y69):DG(X25) DC(Y70):DG(X24) DA(Y71):DT(X23) DC(Y72):DG(X22) DC(Y74):DG(X20) DC(Y75):DG(X19) DC(Y76):DG(X18) DT(Y77):DA(X16) DT(Y78):DA(X15) DT(Y79):DA(X14) DA(Y81):DT(X13) DT(Y82):DA(X12) DA(Y83):DT(X11) DG(Y84):DC(X10) DG(Y85):DC(X9) DC(Y86):DG(X8) DG(Y87):DC(X7) DC(Y88):DG(X6) DC(Y89):DG(X5) DC(Y90):DG(X4) DT(Y91):DA(X3) DT(Y92):DA(X2) DC(Y93):DG(X1) chainA chainM (275) ALA281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (277) VAL283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (278) THR284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (280) ARG286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainN chainP ( 15) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 2 0 0 0 0 0 0 0 0 0 0 (151) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (153) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (159) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (173) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain7 (434) LYS528 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (633) GLU727 0 0 0 0 0 0 0 0 3 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pgndpqeavpsaagkqvdesgtkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrntvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktKkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaatdldaeeEv/dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggeemdnkfgveqpegdedltkekghggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtGykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilcKkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitrhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/ldalprvtcpnhpdailvedyragdmicpecglvvgdrvidvgsewrtfsndkatkdpsrvgdsqnpllsdgdlstmigkgtgaasfdefgnskyqnrrtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvAdVTiRqsyrliyprapdlfptdfkfdtpvdklpql/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqveeeplnseddvsdeegqelfdtenvvvcqydkihrsknkwkfhlkdgimnlngrdyifskaigdaew/tpasessgivpqlqNivstvnlgckldlktialrarnaeynpkrFaavimrireprttaLifssgkmvcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFpgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanihdiggkpasvsaprehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgiHkntwelkpe >6o9l_T:Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=HUMAN HOLO-PIC IN THE CLOSED STATE organism=? DNA sequence DG(X1):DC(Y93) DA(X2):DT(Y92) DA(X3):DT(Y91) DG(X4):DC(Y90) DG(X5):DC(Y89) DG(X6):DC(Y88) DC(X7):DG(Y87) DG(X8):DC(Y86) DC(X9):DG(Y85) DC(X10):DG(Y84) DT(X11):DA(Y83) DA(X12):DT(Y82) DT(X13):DA(Y81) DA(X14):DT(Y79) DA(X15):DT(Y78) DA(X16):DT(Y77) DG(X18):DC(Y76) DG(X19):DC(Y75) DG(X20):DC(Y74) DG(X22):DC(Y72) DT(X23):DA(Y71) DG(X24):DC(Y70) DG(X25):DC(Y69) DG(X26):DC(Y68) DG(X28):DC(Y66) DC(X29):DG(Y65) DG(X30):DC(Y64) DC(X31):DG(Y63) DG(X32):DC(Y62) DT(X33):DA(Y61) DT(X34):DA(Y60) DC(X35):DG(Y59) DG(X36):DC(Y58) DT(X37):DA(Y57) DC(X38):DG(Y56) DC(X39):DG(Y55) DC(X41):DG(Y53) DA(X42):DT(Y52) DG(X43):DC(Y51) DT(X44):DA(Y50) DC(X45):DG(Y49) DG(X46):DC(Y48) DC(X47):DG(Y47) DG(X48):DC(Y46) DA(X49):DT(Y45) DC(X51):DG(Y43) DG(X52):DC(Y42) DA(X53):DT(Y41) DA(X54):DT(Y40) DC(X55):DG(Y39) DA(X56):DT(Y38) DT(X58):DA(Y36) DC(X59):DG(Y35) DG(X60):DC(Y34) DG(X62):DC(Y32) DC(X63):DG(Y31) DC(X64):DG(Y30) DG(X65):DC(Y29) chainT (173) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanihdiggkpasvsaprehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgiHkntwelkpe >6obj_A:Restriction_endonuclease-like; title=STRUCTURE OF A DNA-BOUND DIMER EXTRACTED FROM FILAMENTOUS SGRAI ENDONUCLEASE IN ITS ACTIVATED FORM organism=? DNA sequence DG(D2):DC(C25) DG(D3):DC(C24) DT(D4):DA(C23) DC(D5):DG(C22) DT(D6):DA(C21) DT(D7):DA(C20) DC(D8):DG(C19) DA(D9):DT(C18) DC(D10):DG(C17) DA(D11):DT(C16) DC(D12):DG(C15) DC(D13):DG(C14) DG(D14):DC(C13) DG(D15):DC(C12) DT(D16):DA(C11) DG(D17):DC(C10) DT(D18):DA(C9) DG(D19):DC(C8) DA(D20):DT(C7) DA(D21):DT(C6) DG(D22):DC(C5) DA(D23):DT(C4) DC(D24):DG(C3) DC(D25):DG(C2) chainA ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 1 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 13 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 13 0 0 0 0 0 0 0 0 (241) LYS242 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 0 5 19 11 0 0 0 0 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 0 7 6 1 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 0 0 0 16 11 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfqlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafKrslRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng >6obj_AB:Restriction_endonuclease-like; title=STRUCTURE OF A DNA-BOUND DIMER EXTRACTED FROM FILAMENTOUS SGRAI ENDONUCLEASE IN ITS ACTIVATED FORM organism=STREPTOMYCES GRISEUS DNA sequence DG(C2):DC(D25) DG(C3):DC(D24) DT(C4):DA(D23) DC(C5):DG(D22) DT(C6):DA(D21) DT(C7):DA(D20) DC(C8):DG(D19) DA(C9):DT(D18) DC(C10):DG(D17) DA(C11):DT(D16) DC(C12):DG(D15) DC(C13):DG(D14) DG(C14):DC(D13) DG(C15):DC(D12) DT(C16):DA(D11) DG(C17):DC(D10) DT(C18):DA(D9) DG(C19):DC(D8) DA(C20):DT(D7) DA(C21):DT(D6) DG(C22):DC(D5) DA(C23):DT(D4) DC(C24):DG(D3) DC(C25):DG(D2) chainA ( 30) ARG31 0 0 0 0 0 0 0 1 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 13 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 13 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) LYS242 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 0 0 0 0 11 19 5 0 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 0 0 0 0 1 6 7 0 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 0 0 0 11 16 0 0 0 0 0 0 0 0 0 0 0 chainB ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 1 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 ( 94) ALA95 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 13 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 13 0 0 0 0 0 0 0 0 (241) LYS242 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 0 5 19 11 0 0 0 0 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 0 7 6 1 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 0 0 0 16 11 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfqlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafKrslRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng/pftysieatrnlatterciqdirnapvrnRstqfqlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakAKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafKrslRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng >6od3_ABH:HLH,_helix-loop-helix_DNA-binding_domain; title=HUMAN TCF4 C-TERMINAL BHLH DOMAIN IN COMPLEX WITH 13-BP OLIGONUCLEOTIDE CONTAINING E-BOX SEQUENCE organism=Homo sapiens DNA sequence DA(W2):DT(X13) DT(W3):DA(X12) DA(W4):DT(X11) DC(W5):DG(X10) DA(W6):DT(X9) DC(W7):DG(X8) DG(W8):DC(X7) DT(W9):DA(X6) DG(W10):DC(X5) DT(W11):DA(X4) DA(W12):DT(X3) DT(W13):DA(X2) chainA ( 7) ASN573 0 0 0 0 0 0 0 0 0 0 2 0 ( 8) ASN574 0 0 0 0 0 0 3 2 0 0 0 0 ( 11) GLU577 0 0 0 0 0 0 1 12 10 0 0 0 ( 12) ARG578 0 0 0 0 0 4 5 0 0 0 0 0 ( 14) ARG580 0 0 0 0 0 0 0 2 8 0 0 0 chainB ( 7) ASN573 0 1 0 0 0 0 0 0 0 0 0 0 ( 8) ASN574 0 0 0 0 2 4 0 0 0 0 0 0 ( 10) ARG576 0 1 0 0 0 0 0 0 0 0 0 0 ( 11) GLU577 0 0 0 10 13 2 0 0 0 0 0 0 ( 12) ARG578 0 0 0 0 0 6 4 0 0 0 0 0 ( 14) ARG580 0 0 0 9 2 0 0 0 0 0 0 0 chainH ( 9) ARG576 0 0 0 0 0 0 10 9 6 0 0 0 prot.sequence hmrrmaNNarERlRvrdineafkelgrmvqlhlksdkpqtkllilhqavavilsleqqvrer/hmrrmaNNaRERlRvrdineafkelgrmvqlhlksdkpqtkllilhqavavilsleqqvre/mrrmannaRerlrvrdineafkelgrmvqlhlksdkpqtkllilhqavavilsleqqvrer >6od3_EF:HLH,_helix-loop-helix_DNA-binding_domain; title=HUMAN TCF4 C-TERMINAL BHLH DOMAIN IN COMPLEX WITH 13-BP OLIGONUCLEOTIDE CONTAINING E-BOX SEQUENCE organism=Homo sapiens DNA sequence DA(Y2):DT(Z13) DT(Y3):DA(Z12) DA(Y4):DT(Z11) DC(Y5):DG(Z10) DA(Y6):DT(Z9) DC(Y7):DG(Z8) DG(Y8):DC(Z7) DT(Y9):DA(Z6) DG(Y10):DC(Z5) DT(Y11):DA(Z4) DA(Y12):DT(Z3) DT(Y13):DA(Z2) chainE ( 7) ASN573 0 0 0 0 1 0 0 0 0 0 0 0 ( 8) ASN574 0 0 0 0 3 3 0 0 0 0 0 0 ( 11) GLU577 0 0 0 9 12 2 0 0 0 0 0 0 ( 12) ARG578 0 0 0 0 0 6 4 0 0 0 0 0 ( 14) ARG580 0 0 0 10 1 0 0 0 0 0 0 0 chainF ( 6) ASN573 0 0 0 0 0 0 0 0 0 0 3 0 ( 7) ASN574 0 0 0 0 0 0 2 3 0 0 0 0 ( 9) ARG576 0 0 0 0 0 0 0 0 0 2 6 0 ( 10) GLU577 0 0 0 0 0 0 2 12 8 0 0 0 ( 11) ARG578 0 0 0 0 0 4 5 0 0 0 0 0 ( 13) ARG580 0 0 0 0 0 0 0 1 8 0 0 0 prot.sequence hmrrmaNNarERlRvrdineafkelgrmvqlhlksdkpqtkllilhqavavilsleqqvrer/mrrmaNNaRERlRvrdineafkelgrmvqlhlksdkpqtkllilhqavavilsleqqvre >6od3_F:HLH,_helix-loop-helix_DNA-binding_domain; title=HUMAN TCF4 C-TERMINAL BHLH DOMAIN IN COMPLEX WITH 13-BP OLIGONUCLEOTIDE CONTAINING E-BOX SEQUENCE organism=Homo sapiens DNA sequence DA(Z2):DT(Y13) DT(Z3):DA(Y12) DA(Z4):DT(Y11) DC(Z5):DG(Y10) DA(Z6):DT(Y9) DC(Z7):DG(Y8) DG(Z8):DC(Y7) DT(Z9):DA(Y6) DG(Z10):DC(Y5) DT(Z11):DA(Y4) DA(Z12):DT(Y3) DT(Z13):DA(Y2) chainF ( 6) ASN573 0 3 0 0 0 0 0 0 0 0 0 0 ( 7) ASN574 0 0 0 0 3 2 0 0 0 0 0 0 ( 9) ARG576 0 6 2 0 0 0 0 0 0 0 0 0 ( 10) GLU577 0 0 0 8 12 2 0 0 0 0 0 0 ( 11) ARG578 0 0 0 0 0 5 4 0 0 0 0 0 ( 13) ARG580 0 0 0 8 1 0 0 0 0 0 0 0 prot.sequence mrrmaNNaRERlRvrdineafkelgrmvqlhlksdkpqtkllilhqavavilsleqqvre >6od4_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=HUMAN TCF4 C-TERMINAL BHLH DOMAIN IN COMPLEX WITH 11-BP OLIGONUCLEOTIDE CONTAINING E-BOX SEQUENCE organism=Homo sapiens DNA sequence DT(X2):DA(W11) DA(X3):DT(W10) DC(X4):DG(W9) DA(X5):DT(W8) DC(X6):DG(W7) DG(X7):DC(W6) DT(X8):DA(W5) DG(X9):DC(W4) DT(X10):DA(W3) chainA ( 8) ASN574 0 0 0 3 3 0 0 0 0 ( 11) GLU577 0 0 8 13 1 0 0 0 0 ( 12) ARG578 0 0 0 0 5 3 0 0 0 ( 14) ARG580 0 0 8 1 0 0 0 0 0 chainB ( 8) ASN574 0 0 0 0 0 4 3 0 0 ( 11) GLU577 0 0 0 0 0 2 12 8 0 ( 12) ARG578 0 0 0 0 4 5 0 0 0 ( 14) ARG580 0 0 0 0 0 0 1 8 0 prot.sequence hmrrmanNarERlRvrdineafkelgrmvqlhlksdkpqtkllilhqavavilsleqqvre/hmrrmanNarERlRvrdineafkelgrmvqlhlksdkpqtkllilhqavavilsleqqvre >6od5_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=HUMAN TCF4 C-TERMINAL BHLH DOMAIN IN COMPLEX WITH 12-BP OLIGONUCLEOTIDE CONTAINING E-BOX SEQUENCE WITH 5-CARBOXYLCYTOSINES organism=Homo sapiens DNA sequence DA(X1):DT(Y12) DG(X3):DG(Y11) DC(X4):DG(Y9) DA(X5):DT(Y8) DC(X6):DG(Y7) DG(X7):DC(Y6) DT(X8):DA(Y5) DG(X9):DC(Y4) DG(X11):DG(Y3) DT(X12):DA(Y1) chainA ( 7) ASN573 0 3 8 4 0 0 0 0 0 0 ( 8) ASN574 0 0 0 3 3 0 0 0 0 0 ( 11) GLU577 0 0 13 12 1 0 0 0 0 0 ( 12) ARG578 0 0 0 0 5 4 0 0 0 0 ( 14) ARG580 0 1 10 2 0 0 0 0 0 0 chainB ( 6) ASN573 0 0 0 0 0 0 3 7 1 0 ( 7) ASN574 0 0 0 0 0 3 3 0 0 0 ( 10) GLU577 0 0 0 0 0 1 10 8 0 0 ( 11) ARG578 0 0 0 0 3 5 0 0 0 0 ( 13) ARG580 0 0 0 0 0 0 2 10 0 0 prot.sequence hmrrmaNNarERlRvrdineafkelgrmvqlhlksdkpqtkllilhqavavilsleqqvrer/mrrmaNNarERlRvrdineafkelgrmvqlhlksdkpqtkllilhqavavilsleqqvre >6od5_C:HLH,_helix-loop-helix_DNA-binding_domain; title=HUMAN TCF4 C-TERMINAL BHLH DOMAIN IN COMPLEX WITH 12-BP OLIGONUCLEOTIDE CONTAINING E-BOX SEQUENCE WITH 5-CARBOXYLCYTOSINES organism=Homo sapiens DNA sequence DG(E3):DG(F11) DC(E4):DG(F9) DA(E5):DT(F8) DC(E6):DG(F7) DG(E7):DC(F6) DT(E8):DA(F5) DG(E9):DC(F4) DG(E11):DG(F3) DT(E12):DA(F1) chainC ( 5) ASN573 1 7 4 0 0 0 0 0 0 ( 6) ASN574 0 0 3 3 0 0 0 0 0 ( 9) GLU577 0 8 10 2 0 0 0 0 0 ( 10) ARG578 0 0 0 5 3 0 0 0 0 ( 12) ARG580 0 10 2 0 0 0 0 0 0 prot.sequence rrmaNNarERlRvrdineafkelgrmvqlhlksdkpqtkllilhqavavilsleqqvre >6oe7_A:BB1717-like; title=CRYSTAL STRUCTURE OF HMCES CROSS-LINKED TO DNA ABASIC SITE organism=Homo sapiens DNA sequence DC(B101):DG(C6) DC(B102):DG(C5) DA(B103):DT(C4) DG(B104):DC(C3) DA(B105):DT(C2) DC(B106):DG(C1) chainA ( 80) TRP81 0 0 0 0 0 78 ( 82) LYS83 0 0 0 0 0 2 ( 91) PHE92 0 0 0 0 0 1 (105) ARG106 0 0 0 6 12 9 prot.sequence cgrtschlprdvltracayqdrrgqqrlpewrdpdkycpsynkspqsnspvllsrlhfekdadsseriiapmrwglvpsWfKesdpsklqFnttncrsdtvmekRsfkvplgkgrrcvvladgfyewqrcqgtnqrqpyfiyfpqikspenwekvwdnwrlltmagifdcweppeggdvlysytiitvdsckglsdihhrmpaildgeeavskwldfgevstqealklihptenitfhavssvvnnsrnntpeclapv >6oea_A:BB1717-like; title=CRYSTAL STRUCTURE OF HMCES SRAP DOMAIN IN COMPLEX WITH LONGER 3' OVERHANG DNA organism=Homo sapiens DNA sequence DG(C1):DC(B6) DT(C2):DA(B5) DC(C3):DG(B4) DT(C4):DA(B3) DG(C5):DC(B2) DG(C6):DC(B1) chainA ( 80) TRP81 81 0 0 0 0 0 ( 82) LYS83 2 0 0 0 0 0 ( 91) PHE92 1 0 0 0 0 0 (105) ARG106 10 13 7 0 0 0 prot.sequence cgrtschlprdvltracayqdrrgqqrlpewrdpdkycpsynkspqsnspvllsrlhfekdadsseriiapmrwglvpsWfKesdpsklqFnttncrsdtvmekRsfkvplgkgrrcvvladgfyewqrcqgtnqrqpyfiyfpqikspenwekvwdnwrlltmagifdcweppeggdvlysytiitvdsckglsdihhrmpaildgeeavskwldfgevstqealklihptenitfhavssvvnnsrnntpeclapv >6oeb_A:BB1717-like; title=CRYSTAL STRUCTURE OF HMCES SRAP DOMAIN IN COMPLEX WITH 3' OVERHANG DNA organism=Homo sapiens DNA sequence DG(C1):DC(B6) DT(C2):DA(B5) DC(C3):DG(B4) DT(C4):DA(B3) DG(C5):DC(B2) DG(C6):DC(B1) chainA ( 80) TRP81 83 0 0 0 0 0 ( 82) LYS83 4 0 0 0 0 0 ( 91) PHE92 2 0 0 0 0 0 (105) ARG106 9 14 6 0 0 0 prot.sequence cgrtschlprdvltracayqdrrgqqrlpewrdpdkycpsynkspqsnspvllsrlhfekdadsseriiapmrwglvpsWfKesdpsklqFnttncrsdtvmekRsfkvplgkgrrcvvladgfyewqrcqgtnqrqpyfiyfpqikpenwekvwdnwrlltmagifdcweppeggdvlysytiitvdsckglsdihhrmpaildgeeavskwldfgevstqealklihptenitfhavssvvnnsrnntpeclapv >6oem_A: title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 PRC COMPLEX (DNA0) organism=? DNA sequence DG(J1):DC(G57) DA(J2):DT(G56) DT(J3):DA(G55) DC(J4):DG(G54) DT(J5):DA(G53) DG(J6):DC(G52) DG(J7):DC(G51) DC(J8):DG(G50) DC(J9):DG(G49) DT(J10):DA(G48) DG(J11):DC(G47) DT(J12):DA(G46) DC(J13):DG(G45) DT(J14):DA(G44) DT(J15):DA(G43) DA(J16):DT(G42) DC(J17):DG(G41) DA(J18):DT(G40) DC(J19):DG(G39) DA(J20):DT(G38) DG(J21):DC(G37) DT(J22):DA(G36) DG(J23):DC(G35) DA(J24):DT(G34) DT(J25):DA(G33) DG(J26):DC(G32) DC(J27):DG(G31) DA(J28):DT(G30) DA(J29):DT(G29) DA(J30):DT(G28) DT(J31):DA(G27) DC(J32):DG(G26) DA(J33):DT(G25) DA(J34):DT(G24) DG(J35):DC(G23) DT(J36):DA(G22) DG(J37):DC(G21) DT(J38):DA(G20) DG(J39):DC(G19) DA(J40):DT(G18) DA(J41):DT(G17) DG(J42):DC(G16) DC(J43):DG(G15) DC(J44):DG(G14) DA(J45):DT(G13) DG(J46):DC(G12) DA(J47):DT(G11) DC(J48):DG(G10) DA(J49):DT(G9) DA(J50):DT(G8) DA(J51):DT(G7) DA(J52):DT(G6) DA(J53):DT(G5) DC(J54):DG(G4) DC(J55):DG(G3) DC(J56):DG(G2) DG(J57):DC(G1) chainA ( 3) ARG402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 ( 7) HIS406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (102) HIS501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (575) ARG977 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (576) GLN978 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence trRaqkHrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplHalRnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawanqsgnklfrrfrkmnaRQskcyemedvlkhhwlytskylqkfmnahna >6oem_BH:Galactose_oxidase,_central_domain;HMG-box; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 PRC COMPLEX (DNA0) organism=HOMO SAPIENS / MUS MUSCULUS DNA sequence DC(F1):DG(I46) DG(F2):DC(I45) DG(F3):DC(I44) DG(F4):DC(I43) DT(F5):DA(I42) DT(F6):DA(I41) DT(F7):DA(I40) DT(F8):DA(I39) DT(F9):DA(I38) DG(F10):DC(I37) DT(F11):DA(I36) DT(F12):DA(I35) DA(F13):DT(I34) DA(F14):DT(I33) DG(F15):DC(I32) DG(F16):DC(I31) DG(F17):DC(I30) DC(F18):DG(I29) DT(F19):DA(I28) DG(F20):DC(I27) DT(F21):DA(I26) DA(F22):DT(I25) DT(F23):DA(I24) DC(F24):DG(I23) DA(F25):DT(I22) DC(F26):DG(I21) DT(F27):DA(I20) DG(F28):DC(I19) DT(F29):DA(I18) DG(F30):DC(I17) DT(F31):DA(I16) DA(F32):DT(I15) DA(F33):DT(I14) DG(F34):DC(I13) DA(F35):DT(I12) DC(F36):DG(I11) DA(F37):DT(I10) DG(F38):DC(I9) DG(F39):DC(I8) DC(F40):DG(I7) DC(F41):DG(I6) DA(F42):DT(I5) DG(F43):DC(I4) DA(F44):DT(I3) DT(F45):DA(I2) DC(F46):DG(I1) chainB chainH ( 3) PHE103 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) CYS106 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE122 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA126 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykgkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkqamseafyfytlrcs/afFlfCseyrpkikgehpglsIgdvAkklgemwnntaaddkqpyekkaaklkeky >6oem_DN:Galactose_oxidase,_central_domain;HMG-box; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 PRC COMPLEX (DNA0) organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DG(J1):DC(G57) DA(J2):DT(G56) DT(J3):DA(G55) DC(J4):DG(G54) DT(J5):DA(G53) DG(J6):DC(G52) DG(J7):DC(G51) DC(J8):DG(G50) DC(J9):DG(G49) DT(J10):DA(G48) DG(J11):DC(G47) DT(J12):DA(G46) DC(J13):DG(G45) DT(J14):DA(G44) DT(J15):DA(G43) DA(J16):DT(G42) DC(J17):DG(G41) DA(J18):DT(G40) DC(J19):DG(G39) DA(J20):DT(G38) DG(J21):DC(G37) DT(J22):DA(G36) DG(J23):DC(G35) DA(J24):DT(G34) DT(J25):DA(G33) DG(J26):DC(G32) DC(J27):DG(G31) DA(J28):DT(G30) DA(J29):DT(G29) DA(J30):DT(G28) DT(J31):DA(G27) DC(J32):DG(G26) DA(J33):DT(G25) DA(J34):DT(G24) DG(J35):DC(G23) DT(J36):DA(G22) DG(J37):DC(G21) DT(J38):DA(G20) DG(J39):DC(G19) DA(J40):DT(G18) DA(J41):DT(G17) DG(J42):DC(G16) DC(J43):DG(G15) DC(J44):DG(G14) DA(J45):DT(G13) DG(J46):DC(G12) DA(J47):DT(G11) DC(J48):DG(G10) DA(J49):DT(G9) DA(J50):DT(G8) DA(J51):DT(G7) DA(J52):DT(G6) DA(J53):DT(G5) DC(J54):DG(G4) DC(J55):DG(G3) DC(J56):DG(G2) DG(J57):DC(G1) chainD chainN ( 4) PHE102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) PHE103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) CYS106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykgkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkqamseafyfytlrcs/psaFFlfCseyrpkikgehpgIgdvAkklgemwnnt >6oen_ADN:Galactose_oxidase,_central_domain;HMG-box; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 PRC COMPLEX (DNA1) organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DC(G1):DG(J57) DG(G2):DC(J56) DG(G3):DC(J55) DG(G4):DC(J54) DT(G5):DA(J53) DT(G6):DA(J52) DT(G7):DA(J51) DT(G8):DA(J50) DT(G9):DA(J49) DG(G10):DC(J48) DT(G11):DA(J47) DC(G12):DG(J46) DT(G13):DA(J45) DG(G14):DC(J44) DG(G15):DC(J43) DC(G16):DG(J42) DT(G17):DA(J41) DT(G18):DA(J40) DC(G19):DG(J39) DA(G20):DT(J38) DC(G21):DG(J37) DA(G22):DT(J36) DC(G23):DG(J35) DT(G24):DA(J34) DT(G25):DA(J33) DG(G26):DC(J32) DA(G27):DT(J31) DT(G28):DA(J30) DT(G29):DA(J29) DT(G30):DA(J28) DG(G31):DC(J27) DC(G32):DG(J26) DA(G33):DT(J25) DT(G34):DA(J24) DC(G35):DG(J23) DA(G36):DT(J22) DC(G37):DG(J21) DT(G38):DA(J20) DG(G39):DC(J19) DT(G40):DA(J18) DG(G41):DC(J17) DT(G42):DA(J16) DA(G43):DT(J15) DA(G44):DT(J14) DG(G45):DC(J13) DA(G46):DT(J12) DC(G47):DG(J11) DA(G48):DT(J10) DG(G49):DC(J9) DG(G50):DC(J8) DC(G51):DG(J7) DC(G52):DG(J6) DA(G53):DT(J5) DG(G54):DC(J4) DA(G55):DT(J3) DT(G56):DA(J2) DC(G57):DG(J1) chainA ( 3) ARG402 0 0 0 0 0 0 0 0 0 19 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) HIS406 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) CYS478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) HIS501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (576) GLN978 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainN ( 4) PHE102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence trRaqkHrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflsCsqyhkmyrtvkaitgrqifqplHalRnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawanqsgnklfrrfrkmnarQskcyemedvlkhhwlytskylqkfmnahna/msLqmvTvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcSykgkhqyiihggktpnnelsdkIyiMsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkqamseafyfytlrcs/psaFflfcseyrpkikgehpgIgdvAkklgemwnnt >6oen_BCH:Galactose_oxidase,_central_domain;HMG-box; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 PRC COMPLEX (DNA1) organism=MUS MUSCULUS / HOMO SAPIENS DNA sequence DG(I1):DC(F46) DA(I2):DT(F45) DT(I3):DA(F44) DC(I4):DG(F43) DT(I5):DA(F42) DG(I6):DC(F41) DG(I7):DC(F40) DC(I8):DG(F39) DC(I9):DG(F38) DT(I10):DA(F37) DG(I11):DC(F36) DT(I12):DA(F35) DC(I13):DG(F34) DT(I14):DA(F33) DT(I15):DA(F32) DA(I16):DT(F31) DC(I17):DG(F30) DA(I18):DT(F29) DC(I19):DG(F28) DA(I20):DT(F27) DG(I21):DC(F26) DT(I22):DA(F25) DG(I23):DC(F24) DA(I24):DT(F23) DT(I25):DA(F22) DA(I26):DT(F21) DC(I27):DG(F20) DA(I28):DT(F19) DG(I29):DC(F18) DC(I30):DG(F17) DC(I31):DG(F16) DC(I32):DG(F15) DT(I33):DA(F14) DT(I34):DA(F13) DA(I35):DT(F12) DA(I36):DT(F11) DC(I37):DG(F10) DA(I38):DT(F9) DA(I39):DT(F8) DA(I40):DT(F7) DA(I41):DT(F6) DA(I42):DT(F5) DC(I43):DG(F4) DC(I44):DG(F3) DC(I45):DG(F2) DG(I46):DC(F1) chainC ( 8) ARG402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 15 2 0 0 0 0 0 0 0 0 ( 84) CYS478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) HIS482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (578) ARG977 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (579) GLN978 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainH ( 3) PHE103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 6) CYS106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) SER107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykgkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkqamseafyfytlrcs/hllsltrRaqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflsCsqyHkmyrtvkaitgrqifqplhalRnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsiggnqsgnklfrrfrkmnaRQskcyemedvlkhhwlytskylqkfmnahna/afFlfCSeyrpkikgehpglsIgdvAkklgemwnntaaddkqpyekkaaklkeky >6oen_H:HMG-box; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 PRC COMPLEX (DNA1) organism=HOMO SAPIENS DNA sequence DC(F1):DG(I46) DG(F2):DC(I45) DG(F3):DC(I44) DG(F4):DC(I43) DT(F5):DA(I42) DT(F6):DA(I41) DT(F7):DA(I40) DT(F8):DA(I39) DT(F9):DA(I38) DG(F10):DC(I37) DT(F11):DA(I36) DT(F12):DA(I35) DA(F13):DT(I34) DA(F14):DT(I33) DG(F15):DC(I32) DG(F16):DC(I31) DG(F17):DC(I30) DC(F18):DG(I29) DT(F19):DA(I28) DG(F20):DC(I27) DT(F21):DA(I26) DA(F22):DT(I25) DT(F23):DA(I24) DC(F24):DG(I23) DA(F25):DT(I22) DC(F26):DG(I21) DT(F27):DA(I20) DG(F28):DC(I19) DT(F29):DA(I18) DG(F30):DC(I17) DT(F31):DA(I16) DA(F32):DT(I15) DA(F33):DT(I14) DG(F34):DC(I13) DA(F35):DT(I12) DC(F36):DG(I11) DA(F37):DT(I10) DG(F38):DC(I9) DG(F39):DC(I8) DC(F40):DG(I7) DC(F41):DG(I6) DA(F42):DT(I5) DG(F43):DC(I4) DA(F44):DT(I3) DT(F45):DA(I2) DC(F46):DG(I1) chainH ( 3) PHE103 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) CYS106 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) SER107 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE122 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA126 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence afFlfCSeyrpkikgehpglsIgdvAkklgemwnntaaddkqpyekkaaklkeky >6oeo_AB:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 NFC COMPLEX (DNA1) organism=? DNA sequence DG(I1):DC(F46) DA(I2):DT(F45) DT(I3):DA(F44) DC(I4):DG(F43) DT(I5):DA(F42) DG(I6):DC(F41) DG(I7):DC(F40) DC(I8):DG(F39) DC(I9):DG(F38) DT(I10):DA(F37) DG(I11):DC(F36) DT(I12):DA(F35) DC(I13):DG(F34) DT(I14):DA(F33) DT(I15):DA(F32) DC(I17):DG(F30) DA(I18):DT(F29) DC(I19):DG(F28) DA(I20):DT(F27) DG(I21):DC(F26) DT(I22):DA(F25) DG(I23):DC(F24) DA(I24):DT(F23) DT(I25):DA(F22) DA(I26):DT(F21) DC(I27):DG(F20) DA(I28):DT(F19) DG(I29):DC(F18) DC(I30):DG(F17) DC(I31):DG(F16) DC(I32):DG(F15) DT(I33):DA(F14) DT(I34):DA(F13) DA(I35):DT(F12) DA(I36):DT(F11) DC(I37):DG(F10) DA(I38):DT(F9) DA(I39):DT(F8) DA(I40):DT(F7) DA(I41):DT(F6) DA(I42):DT(F5) DC(I43):DG(F4) DC(I44):DG(F3) DC(I45):DG(F2) DG(I46):DC(F1) chainA ( 43) ASN443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) SER721 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ILE846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) MET847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ASN850 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) ASN852 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence rraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpIMRmNgNfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna/mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscpTgvfhfdikqnhlklkpaifskdscylpplrypatcsykgkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngTiflgipgdnkqamseafyfytlrcs >6oeo_C: title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 NFC COMPLEX (DNA1) organism=MUS MUSCULUS DNA sequence DC(G1):DG(J57) DG(G2):DC(J56) DG(G3):DC(J55) DG(G4):DC(J54) DT(G5):DA(J53) DT(G6):DA(J52) DT(G7):DA(J51) DT(G8):DA(J50) DT(G9):DA(J49) DG(G10):DC(J48) DT(G11):DA(J47) DC(G12):DG(J46) DT(G13):DA(J45) DG(G14):DC(J44) DG(G15):DC(J43) DC(G16):DG(J42) DT(G17):DA(J41) DT(G18):DA(J40) DC(G19):DG(J39) DA(G20):DT(J38) DC(G21):DG(J37) DA(G22):DT(J36) DC(G23):DG(J35) DT(G24):DA(J34) DT(G25):DA(J33) DG(G26):DC(J32) DA(G27):DT(J31) DT(G28):DA(J30) DT(G29):DA(J29) DT(G30):DA(J28) DG(G31):DC(J27) DC(G32):DG(J26) DA(G33):DT(J25) DT(G34):DA(J24) DC(G35):DG(J23) DA(G36):DT(J22) DC(G37):DG(J21) DT(G38):DA(J20) DG(G39):DC(J19) DT(G40):DA(J18) DG(G41):DC(J17) DA(G43):DT(J15) DA(G44):DT(J14) DG(G45):DC(J13) DA(G46):DT(J12) DC(G47):DG(J11) DA(G48):DT(J10) DG(G49):DC(J9) DG(G50):DC(J8) DC(G51):DG(J7) DC(G52):DG(J6) DA(G53):DT(J5) DG(G54):DC(J4) DA(G55):DT(J3) DT(G56):DA(J2) DC(G57):DG(J1) chainC ( 51) ASN443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) SER721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) LYS844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (454) ILE846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (455) MET847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (458) ASN850 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlKpIMRmNgnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna >6oeo_CD:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 NFC COMPLEX (DNA1) organism=MUS MUSCULUS DNA sequence DC(G1):DG(J57) DG(G2):DC(J56) DG(G3):DC(J55) DG(G4):DC(J54) DT(G5):DA(J53) DT(G6):DA(J52) DT(G7):DA(J51) DT(G8):DA(J50) DT(G9):DA(J49) DG(G10):DC(J48) DT(G11):DA(J47) DC(G12):DG(J46) DT(G13):DA(J45) DG(G14):DC(J44) DG(G15):DC(J43) DC(G16):DG(J42) DT(G17):DA(J41) DT(G18):DA(J40) DC(G19):DG(J39) DA(G20):DT(J38) DC(G21):DG(J37) DA(G22):DT(J36) DC(G23):DG(J35) DT(G24):DA(J34) DT(G25):DA(J33) DG(G26):DC(J32) DA(G27):DT(J31) DT(G28):DA(J30) DT(G29):DA(J29) DT(G30):DA(J28) DG(G31):DC(J27) DC(G32):DG(J26) DA(G33):DT(J25) DT(G34):DA(J24) DC(G35):DG(J23) DA(G36):DT(J22) DC(G37):DG(J21) DT(G38):DA(J20) DG(G39):DC(J19) DT(G40):DA(J18) DG(G41):DC(J17) DA(G43):DT(J15) DA(G44):DT(J14) DG(G45):DC(J13) DA(G46):DT(J12) DC(G47):DG(J11) DA(G48):DT(J10) DG(G49):DC(J9) DG(G50):DC(J8) DC(G51):DG(J7) DC(G52):DG(J6) DA(G53):DT(J5) DG(G54):DC(J4) DA(G55):DT(J3) DT(G56):DA(J2) DC(G57):DG(J1) chainC ( 51) ASN443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) SER721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) LYS844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (454) ILE846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (455) MET847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (458) ASN850 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence rqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlKpIMRmNgnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna/mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdiKqnhlklkpaifskdscylpplrypatcsykgkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgDnkqamseafyfytlrcs >6oep_AC:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 12RSS-NFC/23RSS-PRC COMPLEX (DNA1) organism=MUS MUSCULUS DNA sequence DG(I1):DC(F46) DA(I2):DT(F45) DT(I3):DA(F44) DC(I4):DG(F43) DT(I5):DA(F42) DG(I6):DC(F41) DG(I7):DC(F40) DC(I8):DG(F39) DC(I9):DG(F38) DT(I10):DA(F37) DG(I11):DC(F36) DT(I12):DA(F35) DC(I13):DG(F34) DT(I14):DA(F33) DT(I15):DA(F32) DC(I17):DG(F30) DA(I18):DT(F29) DC(I19):DG(F28) DA(I20):DT(F27) DG(I21):DC(F26) DT(I22):DA(F25) DG(I23):DC(F24) DA(I24):DT(F23) DT(I25):DA(F22) DA(I26):DT(F21) DC(I27):DG(F20) DA(I28):DT(F19) DG(I29):DC(F18) DC(I30):DG(F17) DC(I31):DG(F16) DC(I32):DG(F15) DT(I33):DA(F14) DT(I34):DA(F13) DA(I35):DT(F12) DA(I36):DT(F11) DC(I37):DG(F10) DA(I38):DT(F9) DA(I39):DT(F8) DA(I40):DT(F7) DA(I41):DT(F6) DA(I42):DT(F5) DC(I43):DG(F4) DC(I44):DG(F3) DC(I45):DG(F2) DG(I46):DC(F1) chainA ( 43) ASN443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) SER721 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) ILE846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) MET847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ASN850 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 8) ARG402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 9 0 0 0 0 0 0 0 0 0 ( 12) HIS406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 ( 88) HIS482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) HIS501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (581) ARG977 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (582) GLN978 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpIMRmNgnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna/hllsltrRaqkHrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflscsqyHkmyrtvkaitgrqifqplHalRnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgSgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasnqsgnklfrrfrkmnaRQskcyemedvlkhhwlytskylqkfmnahna >6oeq_AC:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 12RSS-PRC/23RSS-NFC COMPLEX (DNA1) organism=MUS MUSCULUS DNA sequence DG(J1):DC(G57) DA(J2):DT(G56) DT(J3):DA(G55) DC(J4):DG(G54) DT(J5):DA(G53) DG(J6):DC(G52) DG(J7):DC(G51) DC(J8):DG(G50) DC(J9):DG(G49) DT(J10):DA(G48) DG(J11):DC(G47) DT(J12):DA(G46) DC(J13):DG(G45) DT(J14):DA(G44) DT(J15):DA(G43) DC(J17):DG(G41) DA(J18):DT(G40) DC(J19):DG(G39) DA(J20):DT(G38) DG(J21):DC(G37) DT(J22):DA(G36) DG(J23):DC(G35) DA(J24):DT(G34) DT(J25):DA(G33) DG(J26):DC(G32) DC(J27):DG(G31) DA(J28):DT(G30) DA(J29):DT(G29) DA(J30):DT(G28) DT(J31):DA(G27) DC(J32):DG(G26) DA(J33):DT(G25) DA(J34):DT(G24) DG(J35):DC(G23) DT(J36):DA(G22) DG(J37):DC(G21) DT(J38):DA(G20) DG(J39):DC(G19) DA(J40):DT(G18) DA(J41):DT(G17) DG(J42):DC(G16) DC(J43):DG(G15) DC(J44):DG(G14) DA(J45):DT(G13) DG(J46):DC(G12) DA(J47):DT(G11) DC(J48):DG(G10) DA(J49):DT(G9) DA(J50):DT(G8) DA(J51):DT(G7) DA(J52):DT(G6) DA(J53):DT(G5) DC(J54):DG(G4) DC(J55):DG(G3) DC(J56):DG(G2) DG(J57):DC(G1) chainA ( 3) ARG402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 16 26 0 0 0 0 0 0 0 0 ( 7) HIS406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 0 0 0 0 0 0 0 ( 79) CYS478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) HIS501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) HIS609 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (575) ARG977 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (576) GLN978 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 51) ASN443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) LYS844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ILE846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (451) MET847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (454) ASN850 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) ASN852 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence trRaqkHrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflsCsqyhkmyrtvkaitgrqifqplHalRnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekHgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawanqsgnklfrrfrkmnaRQskcyemedvlkhhwlytskylqkfmnahna/rqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlKpIMRmNgNfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna >6oer_AB:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 NFC COMPLEX (DNA2) organism=MUS MUSCULUS DNA sequence DG(I1):DC(F46) DA(I2):DT(F45) DT(I3):DA(F44) DC(I4):DG(F43) DT(I5):DA(F42) DG(I6):DC(F41) DG(I7):DC(F40) DC(I8):DG(F39) DC(I9):DG(F38) DT(I10):DA(F37) DG(I11):DC(F36) DT(I12):DA(F35) DC(I13):DG(F34) DT(I14):DA(F33) DT(I15):DA(F32) DA(I16):DT(F31) DC(I17):DT(F30) DA(I18):DT(F29) DC(I19):DG(F28) DA(I20):DT(F27) DG(I21):DC(F26) DT(I22):DA(F25) DG(I23):DC(F24) DA(I24):DT(F23) DT(I25):DA(F22) DA(I26):DT(F21) DC(I27):DG(F20) DA(I28):DT(F19) DG(I29):DC(F18) DC(I30):DG(F17) DC(I31):DG(F16) DC(I32):DG(F15) DT(I33):DA(F14) DT(I34):DA(F13) DA(I35):DT(F12) DA(I36):DT(F11) DC(I37):DG(F10) DA(I38):DT(F9) DA(I39):DT(F8) DA(I40):DT(F7) DA(I41):DT(F6) DA(I42):DT(F5) DC(I43):DG(F4) DC(I44):DG(F3) DC(I45):DG(F2) DG(I46):DC(F1) chainA ( 43) ASN443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) SER721 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) LYS844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ILE846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) MET847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ASN850 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence rraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlKpIMRmNgnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna/mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscpTgvfhfdikqnhlklkpaifskdscylpplrypatcsykgkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngTiflgipgdnkqamseafyfytlrcs >6oer_C: title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 NFC COMPLEX (DNA2) organism=MUS MUSCULUS DNA sequence DG(J1):DC(G57) DA(J2):DT(G56) DT(J3):DA(G55) DC(J4):DG(G54) DT(J5):DA(G53) DG(J6):DC(G52) DG(J7):DC(G51) DC(J8):DG(G50) DC(J9):DG(G49) DT(J10):DA(G48) DG(J11):DC(G47) DT(J12):DA(G46) DC(J13):DG(G45) DT(J14):DA(G44) DT(J15):DA(G43) DC(J17):DT(G41) DA(J18):DT(G40) DC(J19):DG(G39) DA(J20):DT(G38) DG(J21):DC(G37) DT(J22):DA(G36) DG(J23):DC(G35) DA(J24):DT(G34) DT(J25):DA(G33) DG(J26):DC(G32) DC(J27):DG(G31) DA(J28):DT(G30) DA(J29):DT(G29) DA(J30):DT(G28) DT(J31):DA(G27) DC(J32):DG(G26) DA(J33):DT(G25) DA(J34):DT(G24) DG(J35):DC(G23) DT(J36):DA(G22) DG(J37):DC(G21) DT(J38):DA(G20) DG(J39):DC(G19) DA(J40):DT(G18) DA(J41):DT(G17) DG(J42):DC(G16) DC(J43):DG(G15) DC(J44):DG(G14) DA(J45):DT(G13) DG(J46):DC(G12) DA(J47):DT(G11) DC(J48):DG(G10) DA(J49):DT(G9) DA(J50):DT(G8) DA(J51):DT(G7) DA(J52):DT(G6) DA(J53):DT(G5) DC(J54):DG(G4) DC(J55):DG(G3) DC(J56):DG(G2) DG(J57):DC(G1) chainC ( 51) ASN443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 74 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (458) ASN850 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimRmNgnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna >6oer_CDH:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 NFC COMPLEX (DNA2) organism=MUS MUSCULUS / EQUUS CABALLUS DNA sequence DG(J1):DC(G57) DA(J2):DT(G56) DT(J3):DA(G55) DC(J4):DG(G54) DT(J5):DA(G53) DG(J6):DC(G52) DG(J7):DC(G51) DC(J8):DG(G50) DC(J9):DG(G49) DT(J10):DA(G48) DG(J11):DC(G47) DT(J12):DA(G46) DC(J13):DG(G45) DT(J14):DA(G44) DT(J15):DA(G43) DC(J17):DT(G41) DA(J18):DT(G40) DC(J19):DG(G39) DA(J20):DT(G38) DG(J21):DC(G37) DT(J22):DA(G36) DG(J23):DC(G35) DA(J24):DT(G34) DT(J25):DA(G33) DG(J26):DC(G32) DC(J27):DG(G31) DA(J28):DT(G30) DA(J29):DT(G29) DA(J30):DT(G28) DT(J31):DA(G27) DC(J32):DG(G26) DA(J33):DT(G25) DA(J34):DT(G24) DG(J35):DC(G23) DT(J36):DA(G22) DG(J37):DC(G21) DT(J38):DA(G20) DG(J39):DC(G19) DA(J40):DT(G18) DA(J41):DT(G17) DG(J42):DC(G16) DC(J43):DG(G15) DC(J44):DG(G14) DA(J45):DT(G13) DG(J46):DC(G12) DA(J47):DT(G11) DC(J48):DG(G10) DA(J49):DT(G9) DA(J50):DT(G8) DA(J51):DT(G7) DA(J52):DT(G6) DA(J53):DT(G5) DC(J54):DG(G4) DC(J55):DG(G3) DC(J56):DG(G2) DG(J57):DC(G1) chainC ( 51) ASN443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 74 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (458) ASN850 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainH ( 4) PHE102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) CYS106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ILE122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimRmNgnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna/mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdiKqnhlklkpaifskdscylpplrypatcsykgkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkqamseafyfytlrcs/psaFflfCseyrpkikgehpgIgdvakklgemwnnt >6oes_ABCD:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 STC COMPLEX (WITHOUT NBD DOMAIN) organism=MUS MUSCULUS DNA sequence DC(J3):DG(G60) DT(J4):DA(G59) DG(J5):DC(G58) DG(J6):DC(G57) DA(J7):DT(G56) DT(J8):DA(G55) DC(J9):DG(G54) DT(J10):DA(G53) DG(J11):DC(G52) DG(J12):DC(G51) DC(J13):DG(G50) DC(J14):DG(G49) DT(J15):DA(G48) DG(J16):DC(G47) DC(F31):DG(G46) DG(F32):DC(G45) DG(F33):DC(G44) DC(F34):DG(G43) DG(F35):DC(G42) DC(F36):DG(I16) DA(F37):DT(I15) DG(F38):DC(I14) DG(F39):DC(I13) DC(F40):DG(I12) DC(F41):DG(I11) DA(F42):DT(I10) DG(F43):DC(I9) DA(F44):DT(I8) DT(F45):DA(I7) DC(F46):DG(I6) DC(F47):DG(I5) DA(F48):DT(I4) DG(F49):DC(I3) DG(F50):DC(I2) chainA (250) LYS710 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) SER721 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) MET847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC (261) SER721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 (387) MET847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence glqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeKlvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpiMRmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna/mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggIsvssailtqtNndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkqamseafyfytlrc/glqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpiMRmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahn/mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtNndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkqamseafyfytlrcs >6oet_AB:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 STC COMPLEX organism=MUS MUSCULUS DNA sequence DC(I2):DG(G61) DC(I3):DG(G60) DT(I4):DA(G59) DG(I5):DC(G58) DG(I6):DC(G57) DA(I7):DT(G56) DT(I8):DA(G55) DC(I9):DG(G54) DT(I10):DA(G53) DG(I11):DC(G52) DG(I12):DC(G51) DC(I13):DG(G50) DC(I14):DG(G49) DT(I15):DA(G48) DG(I16):DC(G47) DC(F31):DG(G46) DG(F32):DC(G45) DG(F33):DC(G44) DC(F34):DG(G43) chainA (331) SER721 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (457) MET847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 (458) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 14 0 0 chainB prot.sequence rprqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpiMRmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna/mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkQseafyfytlrc >6oet_CD:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF MOUSE RAG1/2 STC COMPLEX organism=MUS MUSCULUS DNA sequence DC(J2):DG(F50) DC(J3):DG(F49) DT(J4):DA(F48) DG(J5):DC(F47) DG(J6):DC(F46) DA(J7):DT(F45) DT(J8):DA(F44) DC(J9):DG(F43) DT(J10):DA(F42) DG(J11):DC(F41) DG(J12):DC(F40) DC(J13):DG(F39) DC(J14):DG(F38) DT(J15):DA(F37) DG(J16):DC(F36) DC(G42):DG(F35) DG(G43):DC(F34) DC(G44):DG(F33) DC(G45):DG(F32) chainC (337) SER721 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 (463) MET847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 (464) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 11 0 0 chainD prot.sequence hinkggrprqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpiMRmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahn/mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkqseafyFytlrcs >6ogj_A:DNA-binding_domain; title=MECP2 MBD IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(D1):DG(C12) DG(D2):DC(C11) DG(D3):DC(C10) DA(D4):DT(C9) DG(D5):DC(C8) DT(D6):DA(C7) DG(D7):DC(C6) DT(D8):DA(C5) DA(D9):DT(C4) DG(D10):DC(C3) DG(D11):DC(C2) DC(D12):DG(C1) chainA ( 19) ARG111 0 0 0 0 0 19 13 2 0 0 0 0 ( 24) SER116 0 0 0 0 0 0 1 1 0 0 0 0 ( 29) ASP121 0 0 0 0 0 2 1 0 0 0 0 0 ( 41) ARG133 0 0 0 0 6 13 1 0 0 0 0 0 prot.sequence pmyddptlpegwtrklkqRksgrSagkyDvylinpqgkafRskveliayfekvgdtsldpndfdftvtgrgspsahh >6ogj_AB:DNA-binding_domain; title=MECP2 MBD IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(D1):DG(C12) DG(D2):DC(C11) DG(D3):DC(C10) DA(D4):DT(C9) DG(D5):DC(C8) DT(D6):DA(C7) DG(D7):DC(C6) DT(D8):DA(C5) DA(D9):DT(C4) DG(D10):DC(C3) DG(D11):DC(C2) DC(D12):DG(C1) chainA ( 19) ARG111 0 0 0 0 0 19 13 2 0 0 0 0 ( 24) SER116 0 0 0 0 0 0 1 1 0 0 0 0 ( 29) ASP121 0 0 0 0 0 2 1 0 0 0 0 0 ( 41) ARG133 0 0 0 0 6 13 1 0 0 0 0 0 chainB ( 25) ARG111 14 12 0 0 0 0 0 0 0 0 0 0 ( 35) ASP121 1 0 0 0 0 0 0 0 0 0 0 0 ( 48) SER134 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence pmyddptlpegwtrklkqRksgrSagkyDvylinpqgkafRskveliayfekvgdtsldpndfdftvtgrgspsahh/iirdrgpmyddptlpegwtrklkqRksgrsagkyDvylinpqgkafrSkveliayfekvgdtsldpndfdftvtgrgspsah >6ogk_A:DNA-binding_domain; title=MECP2 MBD IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(C1):DG(D12) DG(C2):DC(D11) DG(C3):DC(D10) DA(C4):DT(D9) DG(C5):DC(D8) DT(C6):DA(D7) DG(C7):5CM(D6) DT(C8):DA(D5) DA(C9):DT(D4) DG(C10):DC(D3) DG(C11):DC(D2) DC(C12):DG(D1) chainA ( 22) ARG111 0 0 0 0 0 19 13 0 0 0 0 0 ( 32) ASP121 0 0 0 0 0 3 1 0 0 0 0 0 ( 34) TYR123 0 0 0 0 2 0 0 0 0 0 0 0 ( 44) ARG133 0 0 0 0 7 13 2 0 0 0 0 0 prot.sequence drgpmyddptlpegwtrklkqRksgrsagkyDvYlinpqgkafRskveliayfekvgdtsldpndfdftvtgrgsp >6om3_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;BAH_domain;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE ORC1 BAH DOMAIN IN COMPLEX WITH A NUCLEOSOME CORE PARTICLE organism=XENOPUS LAEVIS DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DG(I72):DC(J76) DA(I73):DT(J75) DT(I74):DA(J74) DT(I75):DA(J73) DC(I76):DG(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainA ( 2) HIS39 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 chainF ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/RYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6omf_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF SIGMAS-TRANSCRIPTION INITIATION COMPLEX WITH ACTIVATOR CRL organism=? DNA sequence DT(T1):DA(N46) DC(T2):DT(N45) DC(T3):DT(N44) DC(T4):DA(N43) DA(T5):DA(N42) DG(T6):DT(N41) DT(T7):DT(N40) DA(T8):DG(N39) DA(T9):DC(N38) DT(T10):DA(N34) DT(T11):DA(N33) DA(T12):DT(N32) DA(T13):DT(N31) DC(T14):DC(N30) DG(T15):DA(N29) DA(T16):DT(N28) DG(T17):DA(N27) DA(T27):DT(N26) DG(T28):DC(N25) DC(T29):DG(N24) DA(T30):DT(N23) DC(T31):DG(N22) DC(T32):DG(N21) DG(T33):DC(N20) DG(T34):DC(N19) DC(T35):DG(N18) DT(T36):DA(N17) DA(T37):DT(N16) DT(T38):DA(N15) DG(T39):DC(N14) DT(T40):DA(N13) DG(T41):DC(N12) DT(T42):DA(N11) DT(T43):DA(N10) DC(T44):DG(N9) DC(T45):DG(N8) DG(T46):DC(N7) DC(T47):DG(N6) DT(T48):DA(N5) DA(T49):DT(N4) DT(T50):DA(N3) DT(T51):DA(N2) DC(T52):DG(N1) chainC (198) ASP199 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (538) THR539 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 70 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLTreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >6omf_CDF: title=CRYOEM STRUCTURE OF SIGMAS-TRANSCRIPTION INITIATION COMPLEX WITH ACTIVATOR CRL organism=ESCHERICHIA COLI / SALMONELLA TYPHIMURIUM DNA sequence DT(T1):DA(N46) DC(T2):DT(N45) DC(T3):DT(N44) DC(T4):DA(N43) DA(T5):DA(N42) DG(T6):DT(N41) DT(T7):DT(N40) DA(T8):DG(N39) DA(T9):DC(N38) DT(T10):DA(N34) DT(T11):DA(N33) DA(T12):DT(N32) DA(T13):DT(N31) DC(T14):DC(N30) DG(T15):DA(N29) DA(T16):DT(N28) DG(T17):DA(N27) DA(T27):DT(N26) DG(T28):DC(N25) DC(T29):DG(N24) DA(T30):DT(N23) DC(T31):DG(N22) DC(T32):DG(N21) DG(T33):DC(N20) DG(T34):DC(N19) DC(T35):DG(N18) DT(T36):DA(N17) DA(T37):DT(N16) DT(T38):DA(N15) DG(T39):DC(N14) DT(T40):DA(N13) DG(T41):DC(N12) DT(T42):DA(N11) DT(T43):DA(N10) DC(T44):DG(N9) DC(T45):DG(N8) DG(T46):DC(N7) DC(T47):DG(N6) DT(T48):DA(N5) DA(T49):DT(N4) DT(T50):DA(N3) DT(T51):DA(N2) DC(T52):DG(N1) chainC (198) ASP199 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (538) THR539 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 70 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) THR58 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) GLN59 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) LEU62 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ILE65 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU70 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU76 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN98 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG100 0 0 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) LEU101 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LEU116 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) PHE134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ASP135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG141 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) THR144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) TYR145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) THR147 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) TRP148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) TRP149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) GLN152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) GLU155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) ILE169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) HIS170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) LYS173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 (249) GLU300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 (252) ARG303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLTreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/qrvldaTQlyLgeIgyspLltaeeEvyfarralrgdvasrrrmiesNlRLvvkiarrygnrglaLldlieegnlgliravekFDpeRgfRfSTYaTWWirQtiERaimnqtrtirlpIHivKelnvylrtarelshkldhepsaeeiaeqldkpvddvsrmlrlneritsvdtplggdsekalldiladekengpedttqdddmkqsivkwlfelnakqrevlarrfgllgyeaatledvgreigltRErvRqiqveglrrlreilqtqglniealfr >6omv_B: title=CRYOEM STRUCTURE OF THE LBCAS12A-CRRNA-ACRVA4-DNA COMPLEX organism=LACHNOSPIRACEAE BACTERIUM ND2006 DNA sequence DA(E2):DT(F-2) DA(E3):DT(F-3) DA(E4):DT(F-4) DG(E5):DC(F-5) DG(E6):DC(F-6) DA(E7):DT(F-7) DC(E8):DG(F-8) DG(E9):DC(F-9) chainB (149) THR149 0 2 3 0 0 0 0 0 (518) GLN529 0 1 4 0 0 0 0 0 (527) LYS538 2 2 0 0 0 0 0 0 (531) TYR542 4 0 0 0 0 0 0 0 (581) MET592 4 0 0 0 0 0 0 0 (584) LYS595 5 8 6 0 0 0 0 0 prot.sequence msklekftncyslsktlrfkaipvgktqenidnkrllvedekraedykgvkklldryylsfindvlhsiklknlnnyislfrkktrtekenkelenleinlrkeiakafkgnegykslfkkdiietilpeflddkdeialvnsfngftTaftgffdnrenmfseeakstsiafrcinenltryisnmdifekvdaifdkhevqeikekilnsdydvedffegeffnfvltqegidvynaiiggfvtesgekikglneyinlynqktkqklpkfkplykqvegytsdeevlevfrntlnknseifssikkleklfknfdeyssagifvkngpaistiskdifgewnvirdkwnaeyddihlkkkavvtekyeddrrksfkkigsfsleqlqeyadadlsvveklkeiiiqkvdeiykvygsseklfdadfvlekslkkndavvaimkdlldsvksfenyikaffgegketnrdesfygdfvlaydillkvdhiydairnyvtqkpyskdkfklyfqnpQfmggwdkdKetdYratilrygskyylaimdkkyakclqkidkddvngnyekinykllpgpnkMlpKvffskkwmayynpsediqkiykngtfkkgdmfnlndchklidffkdsisrypkwsnaydfnfsetekykdiagfyreveeqgykvsfesaskkevdklveegklymfqiynkdfsdkshgtpnlhtmyfkllfdennhgqirlsggaelfmrraslkkeelvvhpanspianknpdnpkktttlsydvykdkrfsedqyelhipiainkcpknifkintevrvllkhddnpyvigidrgernllyivvvdgkgniveqyslneiinnfngiriktdyhslldkkekerfearqnwtsienikelkagyisqvvhkicelvekydavialedlnsgfknsrvkvekqvyqkfekmlidklnymvdkksnpcatggalkgyqitnkfesfksmstqngfifyipawltskidpstgfvnllktkytsiadskkfissfdrimyvpeedlfefaldyknfsrtdadyikkwklysygnririffdweevcltsaykelfnkyginyqqgdirallceqsdkafyssfmalmslmlqmrnsitgrtdvdflispvknsdgifydsrnyeaqenailpknadangayniarkvlwaigqfkkaedekldkvkiaisnkewleyaqtsvk >6on0_AB:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF N15 CRO COMPLEXED WITH CONSENSUS OPERATOR DNA organism=ESCHERICHIA PHAGE N15 DNA sequence DT(N2):DA(C17) DT(N3):DA(C16) DA(N4):DT(C15) DT(N5):DA(C14) DA(N6):DT(C13) DG(N7):DC(C12) DC(N8):DG(C11) DT(N9):DA(C10) DA(N10):DT(C9) DG(N11):DC(C8) DC(N12):DG(C7) DT(N13):DA(C6) DA(N14):DT(C5) DT(N15):DA(C4) DA(N16):DT(C3) chainA ( 23) THR23 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 26) ALA26 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 28) TYR28 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN29 0 0 0 8 9 6 0 0 0 0 0 0 0 0 0 chainB ( 23) THR23 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 26) ALA26 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 28) TYR28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 29) GLN29 0 0 0 0 0 0 0 0 0 0 7 9 8 0 0 ( 32) GLN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mkpeelvrhfgdvekaavgvgvTpgAvYQwlqageipplrqsdievrtayklksdftsqrmg/mkpeelvrhfgdvekaavgvgvTpgAvYQwlQageipplrqsdievrtayklksdftsqrmgk >6on0_B:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF N15 CRO COMPLEXED WITH CONSENSUS OPERATOR DNA organism=ESCHERICHIA PHAGE N15 DNA sequence DT(C3):DA(N16) DA(C4):DT(N15) DT(C5):DA(N14) DA(C6):DT(N13) DG(C7):DC(N12) DC(C8):DG(N11) DT(C9):DA(N10) DA(C10):DT(N9) DG(C11):DC(N8) DC(C12):DG(N7) DT(C13):DA(N6) DA(C14):DT(N5) DT(C15):DA(N4) DA(C16):DT(N3) DA(C17):DT(N2) chainB ( 23) THR23 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA26 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 28) TYR28 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN29 0 0 8 9 7 0 0 0 0 0 0 0 0 0 0 ( 32) GLN32 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkpeelvrhfgdvekaavgvgvTpgAvYQwlQageipplrqsdievrtayklksdftsqrmgk >6opm_ABCD: title=CASPOSASE BOUND TO INTEGRATION PRODUCT organism=METHANOSARCINA MAZEI DNA sequence DC(F9):DG(E22) DG(F10):DC(E21) DC(F11):DG(E20) DA(F12):DT(E19) DC(F13):DG(E18) DT(F14):DA(E17) DT(F15):DA(E16) DA(F16):DT(E15) DA(F17):DT(E14) DG(F18):DC(E13) DT(F19):DA(E12) DG(F20):DC(E11) DC(F21):DG(E10) DG(F22):DC(E9) chainA (306) LYS306 0 0 0 0 0 0 0 0 0 0 0 1 2 0 (312) TYR312 0 0 0 0 0 0 0 0 0 0 0 3 0 0 chainB (156) ARG156 11 1 0 0 0 0 0 0 0 0 0 0 0 0 (190) PHE190 0 5 8 0 0 0 0 0 0 0 0 0 0 0 (191) ARG191 13 2 0 0 0 0 0 0 0 0 0 0 0 0 (192) ARG192 0 4 8 20 0 0 0 0 0 0 0 0 0 0 (194) MET194 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (237) SER237 0 0 0 0 0 0 4 0 0 0 0 0 0 0 chainC (306) LYS306 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (312) TYR312 0 0 3 0 0 0 0 0 0 0 0 0 0 0 chainD (156) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 3 11 (190) PHE190 0 0 0 0 0 0 0 0 0 0 0 8 5 0 (191) ARG191 0 0 0 0 0 0 0 0 0 0 0 0 2 9 (192) ARG192 0 0 0 0 0 0 0 0 0 0 20 9 5 0 (194) MET194 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (237) SER237 0 0 0 0 0 0 0 3 0 0 0 0 0 0 prot.sequence mkllllnghginmhvdgaklhikdgrfstteepqeyvfspkrididgiiiygksgnltleairwlikhnvqvsildwngkllttmlppestnlrtkfaqyhafedkearleiakkfieakfykskavldflsqrypeinfdildgltklkdvkstreilgvegtlagkywiefskavpkeydfsnridqfrramgsgdmintmlnygyslleaeclkainsvgldthvgflhemapsknslaydlqepfrfivdlavisliesgameskdfirtenynlrlkptgarkivnefsntlnkkvsyqgKestwsYviflkvrelahyltskkekldftkpeyei/mkllllnghginmhvdgaklhikdgrfstteepqeyvfspkrididgiiiygksgnltleairwlikhnvqvsildwngkllttmlppestnlrtkfaqyhafedkearleiakkfieakfykskavldflsqrypeinfdildgltklkdvkstReilgvegtlagkywiefskavpkeydfsnridqFRRaMgsgdmintmlnygyslleaeclkainsvgldthvgflhemapSknslaydlqepfrfivdlavisliesgameskdfirtenynlrlkptgarkivnefsntlnkkvsyqgkestwsyviflkvrelahyltskkekldftkpeyeieridsydirqkil/mkllllnghginmhvdgaklhikdgrfstteepqeyvfspkrididgiiiygksgnltleairwlikhnvqvsildwngkllttmlppestnlrtkfaqyhafedkearleiakkfieakfykskavldflsqrypeinfdildgltklkdvkstreilgvegtlagkywiefskavpkeydfsnridqfrramgsgdmintmlnygyslleaeclkainsvgldthvgflhemapsknslaydlqepfrfivdlavisliesgameskdfirtenynlrlkptgarkivnefsntlnkkvsyqgKestwsYviflkvrelahyltskkekldftkpeyeieridsydirqkilsisyv/mkllllnghginmhvdgaklhikdgrfstteepqeyvfspkrididgiiiygksgnltleairwlikhnvqvsildwngkllttmlppestnlrtkfaqyhafedkearleiakkfieakfykskavldflsqrypeinfdildgltklkdvkstReilgvegtlagkywiefskavpkeydfsnridqFRRaMgsgdmintmlnygyslleaeclkainsvgldthvgflhemapSknslaydlqepfrfivdlavisliesgameskdfirtenynlrlkptgarkivnefsntlnkkvsyqgkestwsyviflkvrelahyltskkekldftkpeyei >6opm_B: title=CASPOSASE BOUND TO INTEGRATION PRODUCT organism=METHANOSARCINA MAZEI DNA sequence DC(F9):DG(E22) DG(F10):DC(E21) DC(F11):DG(E20) DA(F12):DT(E19) DC(F13):DG(E18) DT(F14):DA(E17) DT(F15):DA(E16) DA(F16):DT(E15) DA(F17):DT(E14) DG(F18):DC(E13) DT(F19):DA(E12) DG(F20):DC(E11) DC(F21):DG(E10) DG(F22):DC(E9) chainB (156) ARG156 11 1 0 0 0 0 0 0 0 0 0 0 0 0 (190) PHE190 0 5 8 0 0 0 0 0 0 0 0 0 0 0 (191) ARG191 13 2 0 0 0 0 0 0 0 0 0 0 0 0 (192) ARG192 0 4 8 20 0 0 0 0 0 0 0 0 0 0 (194) MET194 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (237) SER237 0 0 0 0 0 0 4 0 0 0 0 0 0 0 prot.sequence mkllllnghginmhvdgaklhikdgrfstteepqeyvfspkrididgiiiygksgnltleairwlikhnvqvsildwngkllttmlppestnlrtkfaqyhafedkearleiakkfieakfykskavldflsqrypeinfdildgltklkdvkstReilgvegtlagkywiefskavpkeydfsnridqFRRaMgsgdmintmlnygyslleaeclkainsvgldthvgflhemapSknslaydlqepfrfivdlavisliesgameskdfirtenynlrlkptgarkivnefsntlnkkvsyqgkestwsyviflkvrelahyltskkekldftkpeyeieridsydirqkil >6or7_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DNA AND (-)FTC-TP organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (175) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (467) GLN475 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/tvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkktkwrklvdfrelnkrtqdhpaglkkkksvtvldVgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsDleigqhrtkieelrqhllrelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmhtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >6otz_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA AND (+)FTC-TP organism=? DNA sequence DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 7 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >6otz_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA AND (+)FTC-TP organism=? DNA sequence DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 7 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfhpaglkkkksVtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleIgqhrtkieelrqhllrwglttgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >6oul_IJLR:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI RNAP POLYMERASE BOUND TO RPSTP2 PROMOTER DNA organism=ESCHERICHIA COLI DNA sequence DC(P16):DG(Q80) DA(P17):DT(Q79) DC(P18):DG(Q78) DA(P19):DT(Q77) DA(P20):DT(Q76) DA(P21):DT(Q75) DT(P22):DA(Q74) DC(P23):DG(Q73) DC(P24):DG(Q72) DA(P25):DT(Q71) DT(P26):DA(Q70) DT(P27):DA(Q69) DG(P28):DC(Q68) DA(P29):DT(Q67) DC(P30):DG(Q66) DA(P31):DT(Q65) DA(P32):DT(Q64) DA(P33):DT(Q63) DA(P34):DT(Q62) DG(P35):DC(Q61) DA(P36):DT(Q60) DA(P37):DT(Q59) DG(P38):DC(Q58) DG(P39):DC(Q57) DC(P40):DG(Q56) DT(P41):DA(Q55) DA(P42):DT(Q54) DA(P43):DT(Q53) DA(P44):DT(Q52) DA(P45):DT(Q51) DG(P46):DC(Q50) DG(P47):DC(Q49) DG(P48):DC(Q48) DC(P49):DG(Q47) DC(P55):DC(Q36) DC(P56):DG(Q35) DT(P57):DG(Q34) DT(P63):DA(Q33) DT(P64):DA(Q32) DT(P65):DA(Q31) DG(P66):DC(Q30) DA(P67):DT(Q29) DA(P68):DT(Q28) DT(P69):DA(Q27) DT(P70):DA(Q26) DG(P71):DC(Q25) DT(P72):DA(Q24) DC(P73):DG(Q23) DC(P74):DG(Q22) DA(P75):DT(Q21) DT(P76):DA(Q20) DA(P77):DT(Q19) DT(P78):DA(Q18) DA(P79):DT(Q17) DG(P80):DC(Q16) DA(P81):DT(Q15) chainI (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (566) PRO567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 7) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (431) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) THR583 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) GLU585 0 0 0 0 0 0 0 0 0 0 3 7 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ARG586 0 0 0 0 0 0 0 0 3 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) GLN589 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 16) ARG265 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegPniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/eigrttDpVRmyMreMgtvelltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlRlvisiakkytnrglqfldliqegniglmkavdkfeyrrgykfstyatWWirQaitRsiadqartiripvHmietinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvTRERiRQieakalrklrhpsrsevlrsfldd/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >6oul_L:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI RNAP POLYMERASE BOUND TO RPSTP2 PROMOTER DNA organism=ESCHERICHIA COLI DNA sequence DT(Q15):DA(P81) DC(Q16):DG(P80) DT(Q17):DA(P79) DA(Q18):DT(P78) DT(Q19):DA(P77) DA(Q20):DT(P76) DT(Q21):DA(P75) DG(Q22):DC(P74) DG(Q23):DC(P73) DA(Q24):DT(P72) DC(Q25):DG(P71) DA(Q26):DT(P70) DA(Q27):DT(P69) DT(Q28):DA(P68) DT(Q29):DA(P67) DC(Q30):DG(P66) DA(Q31):DC(P55) DA(Q32):DT(P54) DA(Q33):DT(P53) DG(Q34):DA(P52) DG(Q35):DT(P51) DC(Q36):DA(P50) DG(Q47):DC(P49) DC(Q48):DG(P48) DC(Q49):DG(P47) DC(Q50):DG(P46) DT(Q51):DA(P45) DT(Q52):DA(P44) DT(Q53):DA(P43) DT(Q54):DA(P42) DA(Q55):DT(P41) DG(Q56):DC(P40) DC(Q57):DG(P39) DC(Q58):DG(P38) DT(Q59):DA(P37) DT(Q60):DA(P36) DC(Q61):DG(P35) DT(Q62):DA(P34) DT(Q63):DA(P33) DT(Q64):DA(P32) DT(Q65):DA(P31) DG(Q66):DC(P30) DT(Q67):DA(P29) DC(Q68):DG(P28) DA(Q69):DT(P27) DA(Q70):DT(P26) DT(Q71):DA(P25) DG(Q72):DC(P24) DG(Q73):DC(P23) DA(Q74):DT(P22) DT(Q75):DA(P21) DT(Q76):DA(P20) DT(Q77):DA(P19) DG(Q78):DC(P18) DT(Q79):DA(P17) DG(Q80):DC(P16) chainL ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (431) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (442) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 7 3 0 0 0 0 0 0 0 0 0 0 (444) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 3 0 0 0 0 0 0 0 0 (446) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 (447) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence eigrttdpvrmyMreMgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakKytnrglqfldliqegniglmkavdkFEyrRgYKfSTYaTWWiRQaitRsiadqartiripvHmietinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvTRERiRQieakalrklrhpsrsevlrsfldd >6oun_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA AND (-)3TC-TP organism=? DNA sequence DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) TYR183 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG356 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (439) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 (466) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftiiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsag >6oun_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA AND (-)3TC-TP organism=? DNA sequence DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) TYR183 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG356 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (439) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 (466) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftiiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsag/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfhpaglkkkksvTvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddLyvgsdleigqhrtkieelrqhllrwelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesIviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqle >6ow3_CDF: title=X-RAY CRYSTAL STRUCTURE OF A BACTERIAL REITERATIVE TRANSCRIPTION COMPLEX OF PYRG PROMOTER VARIANT -1T organism=THERMUS THERMOPHILUS DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DT(H17):DA(G11) DG(H18):DC(G10) DA(H19):DT(G9) DT(H20):DA(G8) DG(H21):DC(G7) DC(H22):DG(G6) chainC (414) GLU421 9 0 0 0 0 0 0 0 (415) ARG422 3 0 0 0 0 0 0 0 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvAPgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6oy5_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=X-RAY CRYSTAL STRUCTURE OF A BACTERIAL REITERATIVE TRANSCRIPTION COMPLEX OF PYRG PROMOTER AT 3 MIN organism=THERMUS THERMOPHILUS DNA sequence DA(H4):DT(G21) DT(H5):DA(G20) DG(H6):DA(G19) DG(H7):DA(G18) DG(H8):DA(G17) DA(H9):DC(G16) DG(H10):DC(G15) DC(H11):DC(G14) DC(H15):DG(G13) DT(H16):DA(G12) DC(H17):DG(G11) DT(H18):DA(G10) DG(H19):DC(G9) DA(H20):DT(G8) DT(H21):DA(G7) DG(H22):DC(G6) DC(H23):DG(G5) DA(H24):DC(G4) DG(H25):DC(G3) chainC (180) ASN187 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (236) ARG243 0 0 0 0 2 7 16 0 0 0 0 0 0 0 0 0 0 0 0 (240) PRO247 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) TYR256 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (387) PHE394 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) ARG422 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 (623) ARG630 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (699) GLU706 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (991) TYR998 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdPpkrdkavaYvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqFkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyRsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihiEryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklYhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask >6oy5_CDF: title=X-RAY CRYSTAL STRUCTURE OF A BACTERIAL REITERATIVE TRANSCRIPTION COMPLEX OF PYRG PROMOTER AT 3 MIN organism=THERMUS THERMOPHILUS DNA sequence DA(H4):DT(G21) DT(H5):DA(G20) DG(H6):DA(G19) DG(H7):DA(G18) DG(H8):DA(G17) DA(H9):DC(G16) DG(H10):DC(G15) DC(H11):DC(G14) DC(H15):DG(G13) DT(H16):DA(G12) DC(H17):DG(G11) DT(H18):DA(G10) DG(H19):DC(G9) DA(H20):DT(G8) DT(H21):DA(G7) DG(H22):DC(G6) DC(H23):DG(G5) DA(H24):DC(G4) DG(H25):DC(G3) chainC (180) ASN187 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (236) ARG243 0 0 0 0 2 7 16 0 0 0 0 0 0 0 0 0 0 0 0 (240) PRO247 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) TYR256 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (387) PHE394 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) ARG422 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 (623) ARG630 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (699) GLU706 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (991) TYR998 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (703) ALA705 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 chainF ( 2) ASP79 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) VAL81 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG82 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) LEU85 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) HIS86 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU93 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU99 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ASN191 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ARG193 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) LEU194 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) SER236 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) THR237 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) THR240 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ARG244 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) GLU324 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ASP326 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) SER327 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) PHE332 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdPpkrdkavaYvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqFkdetnplsslrhkrrisalgpggltreRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyRsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihiEryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklYhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpVRqyLHeigqvpLltleeEvelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieaNlRLvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfSTyaTwwiRqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdEkDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6oy6_CDF: title=X-RAY CRYSTAL STRUCTURE OF A BACTERIAL REITERATIVE TRANSCRIPTION COMPLEX OF PYRG PROMOTER AT 5 MIN organism=THERMUS THERMOPHILUS DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DT(H17):DA(G11) DG(H18):DC(G10) DA(H19):DT(G9) DT(H20):DA(G8) DG(H21):DC(G7) DC(H22):DT(G5) DG(H24):DC(G4) DG(H25):DC(G3) chainC (414) GLU421 5 0 0 0 0 0 0 0 0 0 (415) ARG422 18 0 0 0 0 0 0 0 0 0 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvAPgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6oy7_CDF: title=X-RAY CRYSTAL STRUCTURE OF A BACTERIAL REITERATIVE TRANSCRIPTION COMPLEX OF PYRG PROMOTER AT 7 MIN organism=THERMUS THERMOPHILUS DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DT(H17):DA(G11) DG(H18):DC(G10) DA(H19):DT(G9) DT(H20):DA(G8) DG(H21):DC(G7) DC(H22):DG(G6) DG(H24):DC(G4) DG(H25):DC(G3) chainC (414) GLU421 9 0 0 0 0 0 0 0 0 0 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrEragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvApgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqlttqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6p09_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=HUMAN DNA LIGASE 1 BOUND TO AN ADENYLATED, DIDEOXY TERMINATED DNA NICK WITH 200 MM MG2+ organism=Homo sapiens DNA sequence DG(B3):DC(D26) DC(B4):DG(D25) DT(B5):DA(D24) DG(B6):DC(D23) DA(B7):DT(D22) DT(B8):DA(D21) DG(B9):DC(D20) DC(B10):DG(D19) DG(B11):DC(D18) DT(B12):DA(D17) DC(B13):DG(D16) DG(C1):DC(D15) DT(C2):DA(D14) DC(C3):DG(D13) DG(C4):DC(D12) DG(C5):DC(D11) DA(C6):DT(D10) DC(C7):DG(D9) chainA ( 46) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 (287) HIS546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (376) PHE635 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (384) ARG643 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 (511) LYS770 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 (539) THR798 0 0 0 0 0 0 0 0 0 0 0 1 5 3 0 0 0 0 (613) PHE872 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 prot.sequence sndpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsaRlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglelgvgdgvllkavaqatgrqlesvraeaaekgdvglvaensrstqrlmlppppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlrlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlaHptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrnqedntgkypdiisripkiklpsvtsfildteavawdrekkqiqpFqvlttrkRkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdyldgvgdtldlvvigaylgrgKRagryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislrFprfirvredkqpeqattsaqvaclyrkqs >6p0a_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=HUMAN DNA LIGASE 1 BOUND TO AN ADENYLATED, DIDEOXY TERMINATED DNA NICK WITH 2 MM MG2+ organism=Homo sapiens DNA sequence DG(D9):DC(C7) DT(D10):DA(C6) DC(D11):DG(C5) DC(D12):DG(C4) DG(D13):DC(C3) DA(D14):DT(C2) DC(D15):DG(C1) DG(D16):DC(B13) DA(D17):DT(B12) DC(D18):DG(B11) DG(D19):DC(B10) DC(D20):DG(B9) DA(D21):DT(B8) DT(D22):DA(B7) DC(D23):DG(B6) DA(D24):DT(B5) DG(D25):DC(B4) DC(D26):DG(B3) chainA (284) HIS546 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PHE635 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (381) ARG643 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 (508) LYS770 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (536) THR798 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 (610) PHE872 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 prot.sequence sndpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsarlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglelgvgdgvllkavaqatgrqlesvraeaaekgdvglvaensqrlmlppppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlrlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlaHptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrnqedntgkypdiisripkiklpsvtsfildteavawdrekkqiqpFqvlttrkRkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdyldgvgdtldlvvigaylgrgKRagryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislrFprfirvredkqpeqattsaqvaclyrkqs >6p0b_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=HUMAN DNA LIGASE 1 (E346A/E592A) BOUND TO AN ADENYLATED, DIDEOXY TERMINATED DNA NICK WITH 200 MM MG2+ organism=Homo sapiens DNA sequence DG(D9):DC(C7) DT(D10):DA(C6) DC(D11):DG(C5) DC(D12):DG(C4) DG(D13):DC(C3) DA(D14):DT(C2) DC(D15):DG(C1) DG(D16):DC(B13) DA(D17):DT(B12) DC(D18):DG(B11) DG(D19):DC(B10) DC(D20):DG(B9) DA(D21):DT(B8) DT(D22):DA(B7) DC(D23):DG(B6) DA(D24):DT(B5) DG(D25):DC(B4) DC(D26):DG(B3) chainA ( 46) ARG305 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) HIS546 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (376) PHE635 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (384) ARG643 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 (511) LYS770 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) THR798 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 (613) PHE872 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 prot.sequence sndpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsaRlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglalgvgdgvllkavaqatgrqlesvraeaaekgdvglvaensrstqrlmlppppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlrlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlaHptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrnqadntgkypdiisripkiklpsvtsfildteavawdrekkqiqpFqvlttrkRkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdyldgvgdtldlvvigaylgrgKRagryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislRFprfirvredkqpeqattsaqvaclyrkqs >6p0c_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=HUMAN DNA LIGASE 1 BOUND TO AN ADENYLATED, HYDROXYL TERMINATED DNA NICK IN EDTA organism=Homo sapiens DNA sequence DG(D9):DC(C7) DT(D10):DA(C6) DC(D11):DG(C5) DC(D12):DG(C4) DG(D13):DC(C3) DA(D14):DT(C2) DC(D15):DG(C1) DG(D16):DC(B13) DA(D17):DT(B12) DC(D18):DG(B11) DG(D19):DC(B10) DC(D20):DG(B9) DA(D21):DT(B8) DT(D22):DA(B7) DC(D23):DG(B6) DA(D24):DT(B5) DG(D25):DC(B4) DC(D26):DG(B3) chainA ( 46) ARG305 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) HIS546 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (376) PHE635 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (384) ARG643 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 (511) LYS770 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 (539) THR798 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 0 0 (613) PHE872 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 prot.sequence sndpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsaRlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglelgvgdgvllkavaqatgrqlesvraeaaekgdvglvaensrstqrlmlppppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlrlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlaHptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrnqedntgkypdiisripkiklpsvtsfildteavawdrekkqiqpFqvlttrkRkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdyldgvgdtldlvvigaylgrgKRagryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislRFprfirvredkqpeqattsaqvaclyrkqs >6p0d_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=HUMAN DNA LIGASE 1 (E346A/E592A) BOUND TO AN ADENYLATED, HYDROXYL TERMINATED DNA NICK organism=Homo sapiens DNA sequence DG(D9):DC(C7) DT(D10):DA(C6) DC(D11):DG(C5) DC(D12):DG(C4) DG(D13):DC(C3) DA(D14):DT(C2) DC(D15):DG(C1) DG(D16):DC(B13) DA(D17):DT(B12) DC(D18):DG(B11) DG(D19):DC(B10) DC(D20):DG(B9) DA(D21):DT(B8) DT(D22):DA(B7) DC(D23):DG(B6) DA(D24):DT(B5) DG(D25):DC(B4) DC(D26):DG(B3) chainA (375) PHE635 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (383) ARG643 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 (510) LYS770 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 (538) THR798 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 0 0 (612) PHE872 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 prot.sequence ndpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsarlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglalgvgdgvllkavaqatgrqlesvraeaaekgdvglvaensrstqrlmlppppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlrlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlahptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrnqadntgkypdiisripkiklpsvtsfildteavawdrekkqiqpFqvlttrkRkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdyldgvgdtldlvvigaylgrgKRagryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislRFprfirvredkqpeqattsaqvaclyrkqs >6p0g_A: title=N-TERMINAL DOMAIN OF THERMOCOCCUS GAMMATOLERANS MCRB BOUND TO M5C DNA organism=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) / Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) DNA sequence DT(B2):DT(C7) DC(B4):DG(C6) DC(B5):DG(C5) DG(B6):DC(C4) DG(B7):DC(C3) chainA ( 59) TYR61 0 0 5 7 2 ( 79) ARG81 3 7 0 0 0 ( 80) ASN82 0 8 8 0 0 (149) TYR151 0 0 2 1 0 (152) ILE154 0 3 0 0 0 prot.sequence nqlfiigigtgtdeyenfeetilkgvkrnelegqigpdildnccsdvcyfwgrsketiYekkidkgdmvlfyvgkrisRNkvdlnqetavylgiicetveisendvsflndfwrkgenfrflmffkkkpeklhhsineinsklgynpdYfpIagyvkpermsgvydilknilk >6p0s_ABE:Homeodomain-like; title=CRYSTAL STRUCTURE OF TERNARY DNA COMPLEX "FX2" CONTAINING E. COLI FIS AND PHAGE LAMBDA XIS organism=ESCHERICHIA COLI / ESCHERICHIA PHAGE LAMBDA DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DT(D3):DA(C25) DG(D4):DC(C24) DT(D5):DA(C23) DA(D6):DT(C22) DG(D7):DC(C21) DT(D8):DA(C20) DC(D9):DG(C19) DT(D10):DA(C18) DG(D11):DC(C17) DT(D12):DA(C16) DT(D13):DA(C15) DT(D14):DA(C14) DT(D15):DA(C13) DT(D16):DA(C12) DT(D17):DA(C11) DA(D18):DT(C10) DT(D19):DA(C9) DG(D20):DC(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DA(D25):DT(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 69) ASN84 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG85 0 0 0 0 0 3 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR87 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG89 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 59) THR75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 68) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 ( 69) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 17 0 0 0 0 0 ( 71) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 73) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 chainE ( 17) SER17 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) GLU19 0 0 0 0 2 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR20 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG23 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG26 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG39 0 0 0 0 0 0 0 0 0 0 9 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRkklkkygmn/dvltvstqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn/myltlqewnarqrrprSlETvRRwvResrifpppvkdgReylfhesavkvdl >6p0s_E:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF TERNARY DNA COMPLEX "FX2" CONTAINING E. COLI FIS AND PHAGE LAMBDA XIS organism=ESCHERICHIA PHAGE LAMBDA DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DT(D3):DA(C25) DG(D4):DC(C24) DT(D5):DA(C23) DA(D6):DT(C22) DG(D7):DC(C21) DT(D8):DA(C20) DC(D9):DG(C19) DT(D10):DA(C18) DG(D11):DC(C17) DT(D12):DA(C16) DT(D13):DA(C15) DT(D14):DA(C14) DT(D15):DA(C13) DT(D16):DA(C12) DT(D17):DA(C11) DA(D18):DT(C10) DT(D19):DA(C9) DG(D20):DC(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DA(D24):DT(C4) DA(D25):DT(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainE ( 17) SER17 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) GLU19 0 0 0 0 2 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR20 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG23 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG26 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG39 0 0 0 0 0 0 0 0 0 0 9 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence myltlqewnarqrrprSlETvRRwvResrifpppvkdgReylfhesavkvdl >6p0t_ABE:Homeodomain-like; title=CRYSTAL STRUCTURE OF TERNARY DNA COMPLEX "FX(1-2)-1XIS" CONTAINING E. COLI FIS AND PHAGE LAMBDA XIS organism=ESCHERICHIA COLI / ESCHERICHIA PHAGE LAMBDA DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DT(C3):DA(D25) DG(C4):DC(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DG(C9):DC(D19) DT(C10):DA(D18) DT(C11):DA(D17) DT(C12):DA(D16) DT(C13):DA(D15) DT(C14):DA(D14) DA(C15):DT(D13) DA(C16):DT(D12) DC(C17):DG(D11) DA(C18):DT(D10) DG(C19):DC(D9) DA(C20):DT(D8) DC(C21):DG(D7) DT(C22):DA(D6) DA(C23):DT(D5) DC(C24):DG(D4) DA(C25):DT(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainB ( 60) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN84 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG85 0 0 0 0 0 10 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG89 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 71) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 ( 72) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 5 0 0 0 0 0 ( 74) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 chainE ( 17) SER17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 19) GLU19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 2 0 0 0 0 ( 20) THR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 23) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 ( 26) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 ( 39) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 7 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRkklkkygmn/sdvltvstqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn/myltlqewnarqrrprSlETvRRwvResrifpppvkdgReylfhesavkvdl >6p0t_E:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF TERNARY DNA COMPLEX "FX(1-2)-1XIS" CONTAINING E. COLI FIS AND PHAGE LAMBDA XIS organism=ESCHERICHIA PHAGE LAMBDA DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DT(C3):DA(D25) DG(C4):DC(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DG(C9):DC(D19) DT(C10):DA(D18) DT(C11):DA(D17) DT(C12):DA(D16) DT(C13):DA(D15) DT(C14):DA(D14) DA(C15):DT(D13) DA(C16):DT(D12) DC(C17):DG(D11) DA(C18):DT(D10) DG(C19):DC(D9) DA(C20):DT(D8) DC(C21):DG(D7) DT(C22):DA(D6) DA(C23):DT(D5) DC(C24):DG(D4) DA(C25):DT(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainE ( 17) SER17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 19) GLU19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 2 0 0 0 0 ( 20) THR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 23) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 ( 26) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 ( 39) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 7 0 0 0 0 0 0 0 0 0 0 prot.sequence myltlqewnarqrrprSlETvRRwvResrifpppvkdgReylfhesavkvdl >6p0u_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF TERNARY DNA COMPLEX " FX(1-2)-2XIS" CONTAINING E. COLI FIS AND PHAGE LAMBDA XIS organism=? DNA sequence DA(D1):DT(C27) DA(D2):DT(C26) DT(D3):DA(C25) DG(D4):DC(C24) DT(D5):DA(C23) DA(D6):DT(C22) DG(D7):DC(C21) DT(D8):DA(C20) DC(D9):DG(C19) DT(D10):DA(C18) DG(D11):DC(C17) DT(D12):DA(C16) DT(D13):DA(C15) DA(D14):DT(C14) DA(D15):DT(C13) DA(D16):DT(C12) DA(D17):DT(C11) DA(D18):DT(C10) DC(D19):DG(C9) DA(D20):DT(C8) DC(D21):DG(C7) DA(D22):DT(C6) DA(D23):DT(C5) DC(D24):DG(C4) DA(D25):DT(C3) DT(D26):DA(C2) DT(D27):DA(C1) chainA ( 71) ASN84 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG85 0 0 0 0 0 5 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG89 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlRkklkkygmn >6p0u_ABEF:Putative_DNA-binding_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF TERNARY DNA COMPLEX " FX(1-2)-2XIS" CONTAINING E. COLI FIS AND PHAGE LAMBDA XIS organism=ESCHERICHIA COLI / ESCHERICHIA PHAGE LAMBDA DNA sequence DA(C1):DT(D27) DA(C2):DT(D26) DT(C3):DA(D25) DG(C4):DC(D24) DT(C5):DA(D23) DT(C6):DA(D22) DG(C7):DC(D21) DT(C8):DA(D20) DG(C9):DC(D19) DT(C10):DA(D18) DT(C11):DA(D17) DT(C12):DA(D16) DT(C13):DA(D15) DT(C14):DA(D14) DA(C15):DT(D13) DA(C16):DT(D12) DC(C17):DG(D11) DA(C18):DT(D10) DG(C19):DC(D9) DA(C20):DT(D8) DC(C21):DG(D7) DT(C22):DA(D6) DA(C23):DT(D5) DC(C24):DG(D4) DA(C25):DT(D3) DT(C26):DA(D2) DT(C27):DA(D1) chainA ( 71) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 ( 72) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 5 0 0 0 0 0 ( 76) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 chainB ( 61) THR75 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN84 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG85 0 0 0 0 0 15 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG89 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 17) SER17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 19) GLU19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 8 0 1 0 0 0 0 ( 20) THR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 22) ARG22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 23) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 26) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 39) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 10 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG23 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG26 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG39 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdvltvstvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlRkklkkygmn/dvltvstvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn/myltlqewnarqrrprSlETvRRwvResrifpppvkdgReylfhesavkvdl/myltlqewnarqrrprsletvrRwvResrifpppvkdgReylfhesavkvd >6p18_CDFPQ:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=Q21 TRANSCRIPTION ANTITERMINATION COMPLEX: LOADING COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / PHAGE 21 / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(27):DT(161) DC(28):DG(160) DT(29):DA(159) DT(210):DA(158) DA(211):DT(157) DA(212):DT(156) DG(213):DC(155) DA(214):DT(154) DG(215):DC(153) DT(216):DA(152) DC(217):DG(151) DA(218):DT(150) DT(219):DG(149) DT(220):DA(148) DA(221):DT(147) DC(222):DT(146) DC(223):DG(145) DT(224):DG(144) DC(225):DG(143) DT(226):DG(142) DC(227):DT(141) DC(228):DA(140) DA(229):DA(139) DT(230):DT(138) DA(231):DA(137) DA(232):DT(136) DT(233):DA(135) DG(234):DC(134) DC(235):DG(133) DG(236):DC(132) DA(237):DT(131) DA(238):DT(130) DT(239):DA(129) DA(240):DT(128) DG(241):DC(127) DT(242):DA(126) DG(243):DC(125) DT(244):DA(124) DT(245):DA(123) DG(246):DC(122) DC(247):DG(121) DT(248):DA(120) DC(249):DG(119) DA(250):DT(118) DT(251):DA(117) DT(252):DA(116) DT(253):DA(115) DG(254):DC(114) DC(255):DG(113) DT(256):DA(112) DC(257):DG(111) DA(258):DT(110) DA(259):DT(19) DT(260):DA(18) DG(261):DC(17) DA(262):DT(16) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (479) LEU481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (536) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (544) GLU546 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (545) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (241) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) ILE457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 90) HIS95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) CYS112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 0 0 (108) ARG113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 (119) ALA124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ARG128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 12 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 89) HIS95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (107) ARG113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 10 0 0 0 (118) ALA124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (121) ARG127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 3 0 0 0 0 0 0 0 (122) ARG128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 8 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlsLgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtrERagfEVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqlsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/eigrttDpVRmyMreMgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfelarekfaelraqyvvtrdtikahataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqfldliqegniglmkavdkFEyrRgYkfSTYaTWWiRQaiTrsiadqaRtiripVHmIetiNklnRis/lnltkeqhewlngwlelwgawvysgrlekrmssviakfmesvepgrvmtrpmcndddgmlisqvvdsvmyidkkafgillsyyahgsskHaiasyyhrvarprkmlCRgggriqkpslAtcRRevdeilnaslfmiypvldsafk/nltkeqhewlngwlelwgawvysgrlekrmssviakfmesvepgrvmtrpmcndddgmlisqvvdsvmyidkkafgillsyyahgsskHaiasyyhrvarprkmlcRgggriqkpslAtcRRevdeilnaslfmiypvldsafknrkrvekikhva >6p18_P: title=Q21 TRANSCRIPTION ANTITERMINATION COMPLEX: LOADING COMPLEX organism=? DNA sequence DA(27):DT(161) DC(28):DG(160) DT(29):DA(159) DT(210):DA(158) DA(211):DT(157) DA(212):DT(156) DG(213):DC(155) DA(214):DT(154) DG(215):DC(153) DT(216):DA(152) DC(217):DG(151) DA(218):DT(150) DT(219):DG(149) DT(220):DA(148) DA(221):DT(147) DC(222):DT(146) DC(223):DG(145) DT(224):DG(144) DC(225):DG(143) DT(226):DG(142) DC(227):DT(141) DC(228):DA(140) DA(229):DA(139) DT(230):DT(138) DA(231):DA(137) DA(232):DT(136) DT(233):DA(135) DG(234):DC(134) DC(235):DG(133) DG(236):DC(132) DA(237):DT(131) DA(238):DT(130) DT(239):DA(129) DA(240):DT(128) DG(241):DC(127) DT(242):DA(126) DG(243):DC(125) DT(244):DA(124) DT(245):DA(123) DG(246):DC(122) DC(247):DG(121) DT(248):DA(120) DC(249):DG(119) DA(250):DT(118) DT(251):DA(117) DT(252):DA(116) DT(253):DA(115) DG(254):DC(114) DC(255):DG(113) DT(256):DA(112) DC(257):DG(111) DA(258):DT(110) DA(259):DT(19) DT(260):DA(18) DG(261):DC(17) DA(262):DT(16) chainP ( 90) HIS95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) CYS112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 0 0 (108) ARG113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 (119) ALA124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ARG128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 12 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lnltkeqhewlngwlelwgawvysgrlekrmssviakfmesvepgrvmtrpmcndddgmlisqvvdsvmyidkkafgillsyyahgsskHaiasyyhrvarprkmlCRgggriqkpslAtcRRevdeilnaslfmiypvldsafk >6p19_CD: title=Q21 TRANSCRIPTION ANTITERMINATION COMPLEX: LOADED COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(196):DA(224) DT(197):DC(223) DG(198):DC(222) DG(199):DT(221) DT(1100):DC(220) DG(1101):DT(219) DG(1102):DC(218) DA(1103):DC(217) DT(1108):DA(216) DA(1109):DT(215) DC(1110):DG(214) DC(1111):DG(213) DT(1112):DA(212) DC(1113):DG(211) DG(1114):DC(210) DT(1115):DA(29) DT(1116):DA(28) DG(1117):DC(27) DT(1118):DA(26) DG(1119):DC(25) DG(1120):DC(24) DT(1121):DA(23) DA(1122):DT(22) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 (175) ILE177 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (180) SER182 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 39 9 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) MET370 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 chainD ( 28) GLU42 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR46 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) LEU255 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG270 20 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG271 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) ARG275 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) SER319 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariIpyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmMrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpEtinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyRRvinRnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqlsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >6p19_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=Q21 TRANSCRIPTION ANTITERMINATION COMPLEX: LOADED COMPLEX organism=? DNA sequence DG(196):DA(224) DT(197):DC(223) DG(198):DC(222) DG(199):DT(221) DT(1100):DC(220) DG(1101):DT(219) DG(1102):DC(218) DA(1103):DC(217) DT(1108):DA(216) DA(1109):DT(215) DC(1110):DG(214) DC(1111):DG(213) DT(1112):DA(212) DC(1113):DG(211) DG(1114):DC(210) DT(1115):DA(29) DT(1116):DA(28) DG(1117):DC(27) DT(1118):DA(26) DG(1119):DC(25) DG(1120):DC(24) DT(1121):DA(23) DA(1122):DT(22) chainD ( 28) GLU42 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TYR46 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) LEU255 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG270 20 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG271 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) ARG275 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) SER319 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eefdaikialaspdmirswsfgevkkpEtinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyRRvinRnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqlsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >6p1a_B: title=TRANSCRIPTION ANTITERMINATION FACTOR Q21 IN COMPLEX WITH Q21-BINDING- ELEMENT DNA organism=Phage 21 DNA sequence DC(E1):DG(D21) DT(E2):DA(D20) DT(E3):DA(D19) DG(E4):DC(D18) DC(E5):DG(D17) DT(E6):DA(D16) DC(E7):DG(D15) DA(E8):DT(D14) DT(E9):DA(D13) DT(E10):DA(D12) DT(E11):DA(D11) DG(E12):DC(D10) DC(E13):DG(D9) DT(E14):DA(D8) DC(E15):DG(D7) DA(E16):DT(D6) DA(E17):DT(D5) DT(E18):DA(D4) DG(E19):DC(D3) DA(E20):DT(D2) DG(E21):DC(D1) chainB ( 89) HIS95 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (106) CYS112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (107) ARG113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 2 0 0 0 0 (116) SER122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (118) ALA124 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (121) ARG127 0 0 0 0 0 0 0 0 0 0 8 11 5 0 0 0 0 0 0 0 0 (122) ARG128 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 10 0 0 0 0 0 prot.sequence nltkeqhewlngwlelwgawvysgrlekrmssviakfmesvepgrvmtrpmcndddgmlisqvvdsvmyidkkafgillsyyahgsskHaiasyyhrvarprkmlCRgggriqkpSlAtcRRevdeilnaslfmiypvldsafknrk >6p1h_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF DNA POLYMERASE DELTA HOLOENZYME organism=? DNA sequence DT(P19):DA(T17) DT(P20):DA(T16) DC(P21):DG(T15) DC(P22):DG(T14) DT(P23):DA(T13) DC(P24):DG(T12) DC(P25):DG(T11) DC(P26):DG(T10) DC(P27):DG(T9) DT(P28):DA(T8) DA(P29):DT(T7) DC(P30):DG(T6) chainA (351) LYS444 0 0 0 0 0 0 0 0 0 0 3 0 (615) TYR708 0 0 0 0 0 0 0 0 0 0 0 1 (721) LYS814 0 0 0 0 0 0 0 0 0 4 5 0 (722) ARG815 0 0 0 0 0 0 0 1 0 0 0 0 (746) ARG839 0 0 0 0 0 0 0 6 0 0 0 0 prot.sequence lssferkklptdfdpslydisfqqidaeqsvlngikdentstvvrffgvtseghsvlcnvtgfknylyvpapnssdandqeqinkfvhylnetfdhaidsievvskqsiwgysgdtklpfwkiyvtyphmvnklrtaferghlsfnswfsngtttydniaytlrlmvdcgivgmswitlpkgkysmiepnnrvsscqlevsinyrnliahpaegdwshtaplrimsfdiecagrigvfpepeydpviqianvvsiagakkpfirnvftlntcspitgsmifshateeemlsnwrnfiikvdpdviigynttnfdipyllnrakalkvndfpyfgrlktvkqeikesvfssKaygtretknvnidgrlqldllqfiqreyklrsytlnavsahflgeqkedvhysiisdlqngdsetrrrlavyclkdaylplrlmeklmalvnytemarvtgvpfsyllargqqikvvsqlfrkcleidtvipnmqsqasddqyegatviepirgyydvpiatldfnslYpsimmahnlcyttlcnkatverlnlkidedyvitpngdyfvttkrrrgilpiildelisarkrakkdlrdekdpfkrdvlngrqlalkisansvYgftgatvgklpclaisssvtaygrtmilktktavqekycikngykhdavvvygdtdsvmvkfgttdlkeamdlgteaakyvstlfkhpinlefekayfpyllinkKRyaglfwtnpdkfdkldqkglasvRrdscslvsivmnkvlkkiliernvdgalafvretindilhnrvdiskliisktlapnytnpqphavlaermkrregvgpnvgdrvdyviiggndklynraedplfvlenniqvdsryyltnqlqnpiisivapiigdkqangmfvrsgelyikalydvrdleekysrlwtqcqrcagnlhsevlcsnkncdifymrvkvkkelqekveqlskw >6p1i_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA AND DCTP organism=? DNA sequence DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) TYR183 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (350) ARG356 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (442) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 (469) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsiiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrthpaglkkkksvtvlDvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdLeigqhrtkieelrqhllrelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktPkfklpiqketwetwwteywqatwipewefvntpplvklwyql >6p1s_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=POST-CATALYTIC NICKED COMPLEX OF HUMAN DNA POLYMERASE MU WITH 1-NT GAPPED SUBSTRATE CONTAINING TEMPLATE 8OG AND NEWLY INCORPORATED AMP organism=HOMO SAPIENS DNA sequence DC(T1):DG(D4) DG(T2):DC(D3) DG(T3):DC(D2) DC(T4):DG(D1) chainA ( 38) ARG175 0 0 0 4 ( 40) LEU177 0 0 0 3 ( 41) THR178 0 0 3 11 ( 44) ARG181 0 0 0 3 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsegRlLTfcRaasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqqqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqfersfcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsklfqrelrrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >6p1u_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=POST-CATALYTIC NICKED COMPLEX OF HUMAN DNA POLYMERASE MU WITH 1-NT GAPPED SUBSTRATE CONTAINING TEMPLATE 8OG AND NEWLY INCORPORATED CMP organism=HOMO SAPIENS DNA sequence DG(D1):DC(T4) DC(D2):DG(T3) DC(D3):DG(T2) DG(D4):DC(T1) chainA ( 38) ARG175 4 0 0 0 ( 40) LEU177 3 0 0 0 ( 41) THR178 10 3 0 0 ( 44) ARG181 3 0 0 0 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsegRlLTfcRaasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqqqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqhfersfcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsklfqrelrrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >6p1x_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA AND L-DDCTP organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (356) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (448) ARG448 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagir >6p1x_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA AND L-DDCTP organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (356) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (448) ARG448 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagir/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkitteSiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >6p2g_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA AND D-DDCTP organism=? DNA sequence DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) TYR183 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG356 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (439) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 (466) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >6p2g_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA AND D-DDCTP organism=? DNA sequence DG(T708):DC(P821) DC(T709):DC(P820) DG(T710):DG(P819) DC(T711):DC(P818) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) TYR183 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG356 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (439) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 (466) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/tvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrthpaglkkkksvtvldVgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgSdleigqhrtkieelrqhllrelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarahtndvkqlteavqkittesiviwgktpKfklpiqketwetwwteywqatwipewefvntpplvklwyql >6p4f_C:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF THE XPB-BAX1-FORKED DNA TERNARY COMPLEX organism=? DNA sequence DG(G3):DA(H24) DA(G4):DT(H22) DC(G5):DG(H21) DT(G6):DA(H20) DC(G7):DG(H19) DA(G8):DT(H18) DA(G9):DT(H17) DC(G10):DG(H16) DA(G11):DT(H15) DT(G12):DA(H14) DC(G13):DC(H13) chainC (156) ASP155 0 0 0 0 1 0 0 0 0 0 0 (279) PHE278 0 0 0 0 0 0 0 0 0 0 8 (280) HIS279 0 0 0 0 0 0 0 0 0 0 3 (283) VAL282 0 0 0 0 0 0 0 0 0 0 9 (296) LEU295 0 0 0 0 0 0 0 0 0 0 7 (352) TYR351 0 0 0 0 0 0 8 0 0 0 0 (398) TYR397 0 0 0 0 0 0 0 0 1 0 0 prot.sequence gsvylryfkglilsdayapglkwsdelkaysalafkyrdvrkyflekeieveenvidslpfplikdkielrdyqaeavkawlkekrgiivlptgagktqvalkivsimkvatlivvptidlitqwkerinkyldfdpgiigggedslkgitvityDsaytraeelgnkfpllifdevhhlpsegysimaqlfaspyrlgltatperddgkhelypilvgpivyrksveelagkyiakykikklyvsltneekkrydglrkklkdflssrglklqnlddFHrlVklaakdkeareaLlawheslniavnsqskieklreilqeyknekiivftrdtqmayrisktflipvvtYktdkdereeilqkfrdgeyrvivastvfdegvdvpdatlaivmggYgtkrqflqrlgrilrkkdkeallieivtkgtadyrlsr >6p4f_CD:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF THE XPB-BAX1-FORKED DNA TERNARY COMPLEX organism=? DNA sequence DC(H13):DC(G13) DA(H14):DT(G12) DT(H15):DA(G11) DG(H16):DC(G10) DT(H17):DA(G9) DT(H18):DA(G8) DG(H19):DC(G7) DA(H20):DT(G6) DG(H21):DC(G5) DT(H22):DA(G4) DA(H24):DG(G3) chainC (156) ASP155 0 0 0 0 0 0 1 0 0 0 0 (279) PHE278 8 0 0 0 0 0 0 0 0 0 0 (280) HIS279 3 0 0 0 0 0 0 0 0 0 0 (283) VAL282 9 0 0 0 0 0 0 0 0 0 0 (296) LEU295 7 0 0 0 0 0 0 0 0 0 0 (352) TYR351 0 0 0 0 8 0 0 0 0 0 0 (398) TYR397 0 0 1 0 0 0 0 0 0 0 0 chainD prot.sequence gsvylryfkglilsdayapglkwsdelkaysalafkyrdvrkyflekeieveenvidslpfplikdkielrdyqaeavkawlkekrgiivlptgagktqvalkivsimkvatlivvptidlitqwkerinkyldfdpgiigggedslkgitvityDsaytraeelgnkfpllifdevhhlpsegysimaqlfaspyrlgltatperddgkhelypilvgpivyrksveelagkyiakykikklyvsltneekkrydglrkklkdflssrglklqnlddFHrlVklaakdkeareaLlawheslniavnsqskieklreilqeyknekiivftrdtqmayrisktflipvvtYktdkdereeilqkfrdgeyrvivastvfdegvdvpdatlaivmggYgtkrqflqrlgrilrkkdkeallieivtkgtadyrlsr/mglpwelarfsivkdevlphfatnedldlaneiislfkagkklgeideeieylekiydhklvrafvklltrlcefeldspippiqirrelfkygpvldekerediiqkvskklgadimrfvfsdldeekkiikaptisaedlirwynlsllqtllFkaykltvyvssnwkeiirrakwlglmyfaydkplrfeflgpatlvkltekygrnlavllqfiissqnwkieaelvlgkkfkrvyklklanfkelkelvidekrfdssveekfykdftnvikgWKiiRepeplvvdnrvfIpdflvekgnlkvyveivgfwtkeyikekldklkkvkypilillneelgkekfngmNvitykrkidislvykwlrele >6p5c_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BACILLUS FRAGMENT DNA POLYMERASE MUTANT I716M organism=Geobacillus stearothermophilus DNA sequence DC(B21):DG(C14) DG(B22):DC(C13) DA(B23):DT(C12) DT(B24):DA(C11) DC(B25):DG(C10) DA(B26):DT(C9) DC(B27):DG(C8) DG(B28):DC(C7) DC(B29):DG(C6) chainA (287) LYS582 0 0 0 0 1 5 0 0 0 (292) TYR587 0 0 0 0 0 0 1 0 0 (320) ARG615 0 0 0 0 0 0 0 3 8 (327) ASN622 0 0 0 0 0 0 1 0 0 (330) ASN625 0 0 0 0 0 1 7 1 0 (334) ARG629 0 0 0 0 0 0 0 2 4 (419) TYR714 0 0 0 0 0 0 0 0 52 (502) GLN797 0 0 0 0 0 0 0 0 5 (534) HIS829 0 0 0 0 0 0 0 1 1 prot.sequence makmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgmsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6p71_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=X-RAY CRYSTAL STRUCTURE OF A BACTERIAL REITERATIVE TRANSCRIPTION COMPLEX OF PYRBI PROMOTER organism=THERMUS THERMOPHILUS DNA sequence DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DC(G10):DG(H18) DG(G11):DC(H17) DG(G12):DC(H16) DC(G13):DG(H15) DA(G14):DA(H9) DA(G15):DG(H8) DA(G16):DC(H7) DT(G17):DT(H6) DT(G18):DA(H5) DG(G19):DA(H4) DT(G20):DT(H3) chainC (236) ARG243 0 0 0 0 0 0 0 10 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask >6p71_CDF: title=X-RAY CRYSTAL STRUCTURE OF A BACTERIAL REITERATIVE TRANSCRIPTION COMPLEX OF PYRBI PROMOTER organism=THERMUS THERMOPHILUS DNA sequence DT(H3):DT(G20) DA(H4):DG(G19) DA(H5):DT(G18) DT(H6):DT(G17) DC(H7):DA(G16) DG(H8):DA(G15) DA(H9):DA(G14) DG(H15):DC(G13) DC(H16):DG(G12) DC(H17):DG(G11) DG(H18):DC(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) chainC (236) ARG243 0 0 0 0 0 0 10 0 0 0 0 0 0 0 chainD (703) ALA705 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 14 0 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (1236) MET1238 0 0 0 0 0 0 3 0 0 0 0 0 0 0 chainF ( 2) ASP79 0 0 0 0 0 14 0 0 0 0 0 0 0 0 ( 4) VAL81 0 0 0 0 0 12 0 0 0 0 0 0 0 0 ( 5) ARG82 0 0 0 0 0 9 5 0 0 0 0 0 0 0 ( 8) LEU85 0 0 0 0 1 5 0 0 0 0 0 0 0 0 ( 16) LEU93 0 0 0 7 0 0 0 0 0 0 0 0 0 0 ( 22) GLU99 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (114) ASN191 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (116) ARG193 0 0 0 2 9 0 0 0 0 0 0 0 0 0 (117) LEU194 0 0 0 9 0 0 0 0 0 0 0 0 0 0 (159) SER236 0 0 2 3 0 0 0 0 0 0 0 0 0 0 (160) THR237 0 5 1 0 0 0 0 0 0 0 0 0 0 0 (163) THR240 0 0 12 0 0 0 0 0 0 0 0 0 0 0 (167) ARG244 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (246) ASP323 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (249) ASP326 0 0 1 1 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltreragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltMrtfhtggvagaaditqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpVRqyLheigqvpLltleeEvelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieaNlRLvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfSTyaTwwiRqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigDekDsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6p7b_ABC:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF FOWLPOX VIRUS RESOLVASE AND SUBSTRATE HOLLIDAY JUNCTION DNA COMPLEX organism=Fowlpox virus DNA sequence DA(E1):DT(F29) DT(E2):DA(F28) DC(E3):DG(F27) DG(E4):DC(F26) DT(E5):DA(F25) DC(E6):DG(F24) DG(E7):DC(F23) DG(E8):DC(F22) DG(E9):DT(F21) DG(E10):DG(F20) DA(E11):DA(F19) DA(E12):DG(F18) DG(E13):DC(F17) DT(E14):DT(F16) DT(E15):DT(F15) DT(E16):DT(F14) DC(E17):DG(F13) DT(E18):DC(F12) DT(E19):DT(F11) DC(E20):DC(F10) DC(E21):DA(F9) DT(E22):DA(F8) DG(E23):DC(F7) DA(E24):DT(F6) DG(E25):DC(F5) DT(E26):DA(F4) DT(E27):DA(F3) DG(E28):DC(F2) DA(E29):DT(F1) chainA ( 65) LYS65 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 61) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 1 8 3 0 0 0 0 0 0 0 0 0 0 ( 64) PHE64 0 0 0 0 0 0 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER69 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) TYR73 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ASN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 94) LYS94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 98) TYR98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 3 0 0 0 0 0 ( 99) ARG99 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 chainC ( 61) LYS61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PHE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ILE72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) TYR73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence miicsvdigiknpayaifnydntsntikliaieksdwtknwersvardltrynpdvvilekqgfKspnskiiyfikgffynsntkvivrnptfkggsyrnrkkqsidvfiqkiseytdykndilnkytklddiansfnlglsymesllk/miicsvdigiknpayaifnydntsntikliaieksdwtknwersvardltrynpdvvileKqgFkspnSkiiYfikgffynsntkvivrNptfKggsYRnrkkqsidvfiqkiseytdykndilnkytklddiansfnlglsymesll/miicsvdigiknpayaifnydntsntikliaieksdwtknwersvardltrynpdvvileKQgFkspnSkiIYfikgffynsntkvivrnptfkggsyrnrkkqsidvfiqkiseytdykndilnkytklddiansfnlglsymesll >6p7b_B:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF FOWLPOX VIRUS RESOLVASE AND SUBSTRATE HOLLIDAY JUNCTION DNA COMPLEX organism=Fowlpox virus DNA sequence DT(F1):DA(E29) DC(F2):DG(E28) DA(F3):DT(E27) DA(F4):DT(E26) DC(F5):DG(E25) DT(F6):DA(E24) DC(F7):DG(E23) DA(F8):DT(E22) DA(F9):DC(E21) DC(F10):DC(E20) DT(F11):DT(E19) DC(F12):DT(E18) DG(F13):DC(E17) DT(F14):DT(E16) DT(F15):DT(E15) DT(F16):DT(E14) DC(F17):DG(E13) DG(F18):DA(E12) DA(F19):DA(E11) DG(F20):DG(E10) DT(F21):DG(E9) DC(F22):DG(E8) DC(F23):DG(E7) DG(F24):DC(E6) DA(F25):DT(E5) DC(F26):DG(E4) DG(F27):DC(E3) DA(F28):DT(E2) DT(F29):DA(E1) chainB ( 61) LYS61 0 0 0 0 0 0 0 0 0 0 3 8 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PHE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 1 0 0 0 0 0 0 0 0 0 0 ( 69) SER69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) TYR73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ASN90 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) LYS94 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) TYR98 0 0 0 0 0 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ARG99 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence miicsvdigiknpayaifnydntsntikliaieksdwtknwersvardltrynpdvvileKqgFkspnSkiiYfikgffynsntkvivrNptfKggsYRnrkkqsidvfiqkiseytdykndilnkytklddiansfnlglsymesll >6p7e_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF T7 DNA POLYMERASE BOUND TO A PRIMER/TEMPLATE DNA AND A PEPTIDE THAT MIMICS THE C-TERMINAL TAIL OF THE PRIMASE-HELICASE organism=? DNA sequence DG(M802):DC(N875) DG(M803):DC(N874) DC(M804):DG(N873) TTP(C805):DT(N872) DG(M806):DC(N871) DG(M807):DC(N870) DT(M808):DA(N869) DG(M809):DC(N868) DG(M810):DC(N867) DT(M811):DA(N866) DC(M812):DG(N865) DT(M813):DA(N864) DT(M814):DA(N863) DG(M815):DC(N862) DC(M816):DG(N861) DC(M817):DG(N860) DG(M818):DC(N859) DG(M819):DC(N858) DT(M820):DA(N857) DG(M821):DC(N856) DA(M822):DT(N855) TTP(C805):DA(N854) chainC (367) LYS394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (402) ARG429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 (412) GLN439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 (448) ASP475 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (452) LEU479 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (453) GLU480 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (479) HIS506 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (491) ARG518 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (495) LYS522 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (496) THR523 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (499) TYR526 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 (503) TYR530 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (505) ALA532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (513) ILE540 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (579) ASN611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (583) GLN615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 (621) HIS653 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (622) ASP654 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 prot.sequence mivsaiaanallesvtkfhcgviydystaeyvsyrpsdfgayldaleaevargglivfhnghkydvpaltklaklqlnrefhlprencidtlvlsrlihsnlkdtdmgllrsgklpgkrfgshaleawgyrlgemkgeykddfkrmleeqgeeyvdgmewwnfneemmdynvqdvvvtkallekllsdkhyfppeidftdvgyttfwsesleavdiehraawllakqerngfpfdtkaieelyvelaarrsellrkltetfgswyqpkggtemfchprtgkplpkyprdtreyvagapytpvehvvfnpssrdhiqkklqeagwvptkytdkgapvvddevlegvrvddpekqaaidlikeylmiqKrigqsaegdkawlryvaedgkihgsvnpngavtgRathafpnlaQipgvrspygeqcraafgaehhldgitgkpwvqagidasglelrclahfmarfdngeyaheilngdihtknqiaaelptrdnakTfiYgflYgAgdekigqIvgagkergkelkkkflentpaiaalresiqqtlvessqwqvkwkrrwikgldgrkvhvrsphaalNtllQsagalicklwiikteemlvekglkhgwdgdfaymawvHdeiqvgcrteeiaqvvietaqeamrwvgdhwnfrclldtegkmgpnwaich >6p93_A:DNase_I-like; title=HUMAN APE1 K98A AP-ENDONUCLEASE PRODUCT COMPLEX organism=Homo sapiens DNA sequence DC(D2):DG(V10) DG(D3):DC(V9) DA(D4):DT(V8) DC(D5):DG(V7) DG(D6):DC(V6) DG(D7):DC(V5) DA(D8):DT(V4) DT(D9):DA(V3) DC(D10):DG(V2) DC(D11):DG(V1) chainA (135) ARG177 24 0 0 0 0 0 0 0 0 0 (187) ASN229 4 0 0 0 0 0 0 0 0 0 (228) MET270 4 0 0 0 0 0 0 0 0 0 (229) MET271 3 4 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetacsenklpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtyMMnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6p94_A:DNase_I-like; title=HUMAN APE1 C65A AP-ENDONUCLEASE PRODUCT COMPLEX organism=Homo sapiens DNA sequence DG(V1):DC(D11) DG(V2):DC(D10) DA(V3):DT(D9) DT(V4):DA(D8) DC(V5):DG(D7) DC(V6):DG(D6) DG(V7):DC(D5) DT(V8):DA(D4) DC(V9):DG(D3) DG(V10):DC(D2) chainA (135) ARG177 0 0 0 0 0 0 0 0 0 24 (187) ASN229 0 0 0 0 0 0 0 0 0 5 (228) MET270 0 0 0 0 0 0 0 0 0 2 (229) MET271 0 0 0 0 0 0 0 0 5 3 prot.sequence alyedppdqktspsgkpatlkiaswnvdglrawikkkgldwvkeeapdilclqetkcsenklpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtyMMnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6pa7_K:S-adenosyl-L-methionine-dependent_methyltransferases; title=THE CRYO-EM STRUCTURE OF THE HUMAN DNMT3A2-DNMT3B3 COMPLEX BOUND TO NUCLEOSOME. organism=HOMO SAPIENS DNA sequence DC(I3):DG(J165) DG(I4):DC(J164) DG(I5):DC(J163) DC(I6):DG(J162) DC(I7):DG(J161) DG(I8):DC(J160) DC(I9):DG(J159) DC(I10):DG(J158) DC(I11):DG(J157) DT(I12):DA(J156) DG(I13):DC(J155) DG(I14):DC(J154) DA(I15):DT(J153) DG(I16):DC(J152) DA(I17):DT(J151) DA(I18):DT(J150) DT(I19):DA(J149) DC(I20):DG(J148) DC(I21):DG(J147) DC(I22):DG(J146) DG(I23):DC(J145) DG(I24):DC(J144) DT(I25):DA(J143) DG(I26):DC(J142) DC(I27):DG(J141) DC(I28):DG(J140) DG(I29):DC(J139) DA(I30):DT(J138) DG(I31):DC(J137) DG(I32):DC(J136) DC(I33):DG(J135) DC(I34):DG(J134) DG(I35):DC(J133) DC(I36):DG(J132) DT(I37):DA(J131) DC(I38):DG(J130) DA(I39):DT(J129) DA(I40):DT(J128) DT(I41):DA(J127) DT(I42):DA(J126) DG(I43):DC(J125) DG(I44):DC(J124) DT(I45):DA(J123) DC(I46):DG(J122) DG(I47):DC(J121) DT(I48):DA(J120) DA(I49):DT(J119) DG(I50):DC(J118) DA(I51):DT(J117) DC(I52):DG(J116) DA(I53):DT(J115) DG(I54):DC(J114) DC(I55):DG(J113) DT(I56):DA(J112) DC(I57):DG(J111) DT(I58):DA(J110) DA(I59):DT(J109) DG(I60):DC(J108) DC(I61):DG(J107) DA(I62):DT(J106) DC(I63):DG(J105) DC(I64):DG(J104) DG(I65):DC(J103) DC(I66):DG(J102) DT(I67):DA(J101) DT(I68):DA(J100) DA(I69):DT(J99) DA(I70):DT(J98) DA(I71):DT(J97) DC(I72):DG(J96) DG(I73):DC(J95) DC(I74):DG(J94) DA(I75):DT(J93) DC(I76):DG(J92) DG(I77):DC(J91) DT(I78):DA(J90) DA(I79):DT(J89) DC(I80):DG(J88) DG(I81):DC(J87) DC(I82):DG(J86) DG(I83):DC(J85) DC(I84):DG(J84) DT(I85):DA(J83) DG(I86):DC(J82) DT(I87):DA(J81) DC(I88):DG(J80) DC(I89):DG(J79) DC(I90):DG(J78) DC(I91):DG(J77) DC(I92):DG(J76) DG(I93):DC(J75) DC(I94):DG(J74) DG(I95):DC(J73) DT(I96):DA(J72) DT(I97):DA(J71) DT(I98):DA(J70) DT(I99):DA(J69) DA(I100):DT(J68) DA(I101):DT(J67) DC(I102):DG(J66) DC(I103):DG(J65) DG(I104):DC(J64) DC(I105):DG(J63) DC(I106):DG(J62) DA(I107):DT(J61) DA(I108):DT(J60) DG(I109):DC(J59) DG(I110):DC(J58) DG(I111):DC(J57) DG(I112):DC(J56) DA(I113):DT(J55) DT(I114):DA(J54) DT(I115):DA(J53) DA(I116):DT(J52) DC(I117):DG(J51) DT(I118):DA(J50) DC(I119):DG(J49) DC(I120):DG(J48) DC(I121):DG(J47) DT(I122):DA(J46) DA(I123):DT(J45) DG(I124):DC(J44) DT(I125):DA(J43) DC(I126):DG(J42) DT(I127):DA(J41) DC(I128):DG(J40) DC(I129):DG(J39) DA(I130):DT(J38) DG(I131):DC(J37) DG(I132):DC(J36) DC(I133):DG(J35) DA(I134):DT(J34) DC(I135):DG(J33) DG(I136):DC(J32) DT(I137):DA(J31) DG(I138):DC(J30) DT(I139):DA(J29) DC(I140):DG(J28) DA(I141):DT(J27) DG(I142):DC(J26) DA(I143):DT(J25) DT(I144):DA(J24) DA(I145):DT(J23) DT(I146):DA(J22) DA(I147):DT(J21) DT(I148):DA(J20) DA(I149):DT(J19) DC(I150):DG(J18) DA(I151):DT(J17) DT(I152):DA(J16) DC(I153):DG(J15) DC(I154):DG(J14) DT(I155):DA(J13) DG(I156):DC(J12) DT(I157):DA(J11) DG(I158):DC(J10) DG(I159):DC(J9) DC(I160):DG(J8) DG(I161):DC(J7) DG(I162):DC(J6) DC(I163):DG(J5) DC(I164):DG(J4) DG(I165):DC(J3) DA(I166):DT(J2) DT(I167):DA(J1) chainK ( 99) ASN711 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) LEU883 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hdqefdppkvyppvpaekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcNdlsivnparkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtdqhfpvfmnekedilwctemervfgfpvhytdvsnmsrLarqrllgrswsvpvirhlfaplkeyfacv >6pax_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE HUMAN PAX-6 PAIRED DOMAIN-DNA COMPLEX REVEALS A GENERAL MODEL FOR PAX PROTEIN-DNA INTERACTIONS organism=Homo sapiens DNA sequence DG(B1003):DC(C2026) DC(B1004):DG(C2025) DA(B1005):DT(C2024) DT(B1006):DA(C2023) DT(B1007):DA(C2022) DT(B1008):DA(C2021) DT(B1009):DA(C2020) DC(B1010):DG(C2019) DA(B1011):DT(C2018) DC(B1012):DG(C2017) DG(B1013):DC(C2016) DC(B1014):DG(C2015) DA(B1015):DT(C2014) DT(B1016):DA(C2013) DG(B1017):DC(C2012) DA(B1018):DT(C2011) DG(B1019):DC(C2010) DT(B1020):DA(C2009) DG(B1021):DC(C2008) DC(B1022):DG(C2007) DA(B1023):DT(C2006) DC(B1024):DG(C2005) DA(B1025):DT(C2004) DG(B1026):DC(C2003) chainA ( 14) ASN14 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) SER46 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN47 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) CYS49 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) SER51 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ILE68 0 0 0 0 0 0 0 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 ( 71) SER71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 ( 74) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 (116) SER116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (117) VAL117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (118) SER118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 1 0 0 0 (119) SER119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (121) ASN121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (122) ARG122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 (125) ARG125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 prot.sequence shsgvnqlggvfvNgRplpdstrqrivelahsgarpcdisrilqvSNgCvSKilgryyatgsirpraIggSkpRvatpevvskiaqykqecpsifaweirdrllsegvctndnipSVSSiNRvlRnlasekqq >6pb4_CDFGH:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;C-terminal_domain_of_RNA_polymerase_alpha_subunit;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=THE E. COLI CLASS-II CAP-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX WITH DE NOVO RNA TRANSCRIPT AT THE STATE 2 organism=ESCHERICHIA COLI DNA sequence DC(21):DG(190) DG(22):DC(189) DC(23):DG(188) DC(24):DG(187) DG(25):DC(186) DC(26):DG(185) DG(27):DC(184) DT(28):DA(183) DC(29):DG(182) DA(210):DT(181) DG(211):DC(180) DA(212):DT(179) DC(213):DG(178) DT(214):DA(177) DC(215):DC(176) DG(216):DG(175) DT(217):DT(174) DA(218):DG(173) DG(219):DT(172) DG(220):DG(171) DA(221):DT(170) DT(222):DA(169) DT(223):DA(168) DA(224):DT(167) DT(225):DA(166) DA(226):DT(165) DG(227):DC(164) DC(228):DG(163) DA(229):DT(162) DT(230):DA(161) DA(231):DT(160) DA(232):DT(159) DA(233):DT(158) DA(234):DT(157) DA(235):DT(156) DA(236):DT(155) DG(237):DC(154) DA(238):DT(153) DT(239):DA(152) DG(240):DC(151) DC(241):DG(150) DG(242):DC(149) DA(243):DT(148) DA(244):DT(147) DA(245):DT(146) DA(246):DT(145) DA(247):DT(144) DT(248):DA(143) DG(249):DC(142) DT(250):DA(141) DG(251):DC(140) DA(252):DT(139) DT(253):DA(138) DC(254):DG(137) DT(255):DA(136) DA(256):DT(135) DG(257):DC(134) DA(258):DT(133) DT(259):DA(132) DC(260):DG(131) DA(261):DT(130) DC(262):DG(129) DA(263):DT(128) DT(264):DA(127) DT(265):DA(126) DT(266):DA(125) DT(267):DA(124) DA(268):DT(123) DG(269):DC(122) DG(270):DC(121) DC(271):DG(120) DA(272):DT(119) DA(273):DT(118) DA(274):DT(117) DA(275):DT(116) DA(276):DT(115) DA(277):DT(114) DG(278):DC(113) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG175 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 7 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) ARG322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 6) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (375) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (172) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) THR182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (173) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgePptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkRplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/rttdpVRmyMreMgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNRglqfldliqegniglmkavdkFEyrRgYKfSTYaTWWiRQaiTRsIadqartiripvHmietinklNrisrqmlqemgreptpeelaermlmpedkirkvlkiaKepIsmetpIgDdeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtrerirqieakalrklrhpsrsevlrsfldd/ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsRETvgRilkmledqnlisahgktivv/ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsrEtvgrilkmledqnlisahgktivv >6pb4_H:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE E. COLI CLASS-II CAP-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX WITH DE NOVO RNA TRANSCRIPT AT THE STATE 2 organism=ESCHERICHIA COLI O157:H7 DNA sequence DC(113):DG(278) DT(114):DA(277) DT(115):DA(276) DT(116):DA(275) DT(117):DA(274) DT(118):DA(273) DT(119):DA(272) DG(120):DC(271) DC(121):DG(270) DC(122):DG(269) DT(123):DA(268) DA(124):DT(267) DA(125):DT(266) DA(126):DT(265) DA(127):DT(264) DT(128):DA(263) DG(129):DC(262) DT(130):DA(261) DG(131):DC(260) DA(132):DT(259) DT(133):DA(258) DC(134):DG(257) DT(135):DA(256) DA(136):DT(255) DG(137):DC(254) DA(138):DT(253) DT(139):DA(252) DC(140):DG(251) DA(141):DT(250) DC(142):DG(249) DA(143):DT(248) DT(144):DA(247) DT(145):DA(246) DT(146):DA(245) DT(147):DA(244) DT(148):DA(243) DC(149):DG(242) DG(150):DC(241) DC(151):DG(240) DA(152):DT(239) DT(153):DA(238) DC(154):DG(237) DT(155):DA(236) DT(156):DA(235) DT(157):DA(234) DT(158):DA(233) DT(159):DA(232) DT(160):DA(231) DA(161):DT(230) DT(162):DA(229) DG(163):DC(228) DC(164):DG(227) DT(165):DA(226) DA(166):DT(225) DT(167):DA(224) DA(168):DT(223) DA(169):DT(222) DT(170):DA(221) DG(171):DG(220) DT(172):DG(219) DG(173):DA(218) DT(174):DT(217) DG(175):DG(216) DC(176):DC(215) DA(177):DT(214) DG(178):DC(213) DT(179):DA(212) DC(180):DG(211) DT(181):DA(210) DG(182):DC(29) DA(183):DT(28) DC(184):DG(27) DG(185):DC(26) DC(186):DG(25) DG(187):DC(24) DG(188):DC(23) DC(189):DG(22) DG(190):DC(21) chainH (173) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsrEtvgrilkmledqnlisahgktivv >6pb5_CFGH:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;C-terminal_domain_of_RNA_polymerase_alpha_subunit;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=THE E. COLI CLASS-II CAP-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX AT THE STATE 1 ARCHITECTURE organism=ESCHERICHIA COLI DNA sequence DC(113):DG(278) DT(114):DA(277) DT(115):DA(276) DT(116):DA(275) DT(117):DA(274) DT(118):DA(273) DT(119):DA(272) DG(120):DC(271) DC(121):DG(270) DC(122):DG(269) DT(123):DA(268) DA(124):DT(267) DA(125):DT(266) DA(126):DT(265) DA(127):DT(264) DT(128):DA(263) DG(129):DC(262) DT(130):DA(261) DG(131):DC(260) DA(132):DT(259) DT(133):DA(258) DC(134):DG(257) DT(135):DA(256) DA(136):DT(255) DG(137):DC(254) DA(138):DT(253) DT(139):DA(252) DC(140):DG(251) DA(141):DT(250) DC(142):DG(249) DA(143):DT(248) DT(144):DA(247) DT(145):DA(246) DT(146):DA(245) DT(147):DA(244) DT(148):DA(243) DC(149):DG(242) DG(150):DC(241) DC(151):DG(240) DA(152):DT(239) DT(153):DA(238) DC(154):DG(237) DT(155):DA(236) DT(156):DA(235) DT(157):DA(234) DT(158):DA(233) DT(159):DA(232) DT(160):DA(231) DA(161):DT(230) DT(162):DA(229) DG(163):DC(228) DC(164):DG(227) DT(165):DA(226) DA(166):DT(225) DT(167):DA(224) DA(168):DT(223) DA(169):DT(222) DT(170):DA(221) DG(171):DG(220) DT(172):DG(219) DG(173):DA(218) DT(174):DT(217) DG(175):DG(216) DC(176):DC(215) DA(177):DT(214) DG(178):DC(213) DT(179):DA(212) DC(180):DG(211) DT(181):DA(210) DG(182):DC(29) DA(183):DT(28) DC(184):DG(27) DG(185):DC(26) DC(186):DG(25) DG(187):DC(24) DG(188):DC(23) DC(189):DG(22) DG(190):DC(21) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (175) ILE177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (178) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 9 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 25 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) ASP393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) ASP396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (511) GLN513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 chainF ( 6) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (252) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (172) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (173) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariIpyRgsWldfefdpkdnlfvridRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffseDRyDlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsQfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/ttdpvRmyMReMgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqfldliqegniglmkavdkFEyrRgYkfSTYaTWWiRQaiTRsiadqartiripVHmiEtiNklNrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigdDeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtrerirqieakalrklrhpsrsevlrsfldd/ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsREtvgRilkmledqnlisahgktivv/ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsrEtvgrilkmledqnlisahgktivv >6pb5_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THE E. COLI CLASS-II CAP-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX AT THE STATE 1 ARCHITECTURE organism=ESCHERICHIA COLI DNA sequence DA(277) DA(276) DA(275) DA(274) DA(273) DA(272) DC(271) DG(270) DG(269) DA(268) DT(267) DT(266) DT(265) DT(264) DA(263) DC(262) DA(261) DC(260) DT(259) DA(258) DG(257) DA(256) DT(255) DC(254) DT(253) DA(252) DG(251) DT(250) DG(249) DT(248) DA(247) DA(246) DA(245) DC(21) DG(22) DC(23) DC(24) DG(25) DC(26) DG(27) DT(28) DC(29) DA(210) DG(211) DA(212) DC(213) DT(214) DC(215) DG(216) DT(217) DA(218) DG(219) DG(220) DA(221) DT(222) DT(223) DA(224) DT(225) DA(226) DG(227) DC(228) DA(229) DT(230) DA(231) DA(232) DA(233) DA(234) DA(235) DA(236) DG(237) DA(238) DT(239) DG(240) DC(241) DG(242) DA(243) DA(244):DA(245) chainD (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >6pb6_CDFGH:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;C-terminal_domain_of_RNA_polymerase_alpha_subunit;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=THE E. COLI CLASS-II CAP-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX AT THE STATE 2 organism=ESCHERICHIA COLI DNA sequence DC(113):DG(278) DT(114):DA(277) DT(115):DA(276) DT(116):DA(275) DT(117):DA(274) DT(118):DA(273) DT(119):DA(272) DG(120):DC(271) DC(121):DG(270) DC(122):DG(269) DT(123):DA(268) DA(124):DT(267) DA(125):DT(266) DA(126):DT(265) DA(127):DT(264) DT(128):DA(263) DG(129):DC(262) DT(130):DA(261) DG(131):DC(260) DA(132):DT(259) DT(133):DA(258) DC(134):DG(257) DT(135):DA(256) DA(136):DT(255) DG(137):DC(254) DA(138):DT(253) DT(139):DA(252) DC(140):DG(251) DA(141):DT(250) DC(142):DG(249) DA(143):DT(248) DT(144):DA(247) DT(145):DA(246) DT(146):DA(245) DT(147):DA(244) DT(148):DA(243) DC(149):DG(242) DG(150):DC(241) DC(151):DG(240) DA(152):DT(239) DT(153):DA(238) DC(154):DG(237) DT(155):DA(236) DT(156):DA(235) DT(157):DA(234) DT(158):DA(233) DT(159):DA(232) DT(160):DA(231) DA(161):DT(230) DT(162):DA(229) DG(163):DC(228) DC(164):DG(227) DT(165):DA(226) DA(166):DT(225) DT(167):DA(224) DA(168):DT(223) DA(169):DT(222) DT(170):DA(221) DG(171):DG(220) DT(172):DG(219) DG(173):DA(218) DT(174):DT(217) DG(175):DG(216) DC(176):DC(215) DA(177):DT(214) DG(178):DC(213) DT(179):DA(212) DC(180):DG(211) DT(181):DA(210) DG(182):DC(29) DA(183):DT(28) DC(184):DG(27) DG(185):DC(26) DC(186):DG(25) DG(187):DC(24) DG(188):DC(23) DC(189):DG(22) DG(190):DC(21) chainC (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 chainD (300) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 chainF ( 6) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (455) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (172) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (173) GLU181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvridRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveRavkerlslgdldtlmpqdminakpisaavkeffgSsqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/rttdpVRmyMReMgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkYtNRglqfldliqegniglmkavdkFEyrRgykfSTYaTWWiRQaiTrsiadqartiripvHmietiNklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpIgDdeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtrERirqieakalrklrhpsrsevlrsfldd/ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsREtvgRilkmledqnlisahgktivv/ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsrEtvgRilkmledqnlisahgktivv >6pb6_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THE E. COLI CLASS-II CAP-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX AT THE STATE 2 organism=ESCHERICHIA COLI DNA sequence DC(21):DG(190) DG(22):DC(189) DC(23):DG(188) DC(24):DG(187) DG(25):DC(186) DC(26):DG(185) DG(27):DC(184) DT(28):DA(183) DC(29):DG(182) DA(210):DT(181) DG(211):DC(180) DA(212):DT(179) DC(213):DG(178) DT(214):DA(177) DC(215):DC(176) DG(216):DG(175) DT(217):DT(174) DA(218):DG(173) DG(219):DT(172) DG(220):DG(171) DA(221):DT(170) DT(222):DA(169) DT(223):DA(168) DA(224):DT(167) DT(225):DA(166) DA(226):DT(165) DG(227):DC(164) DC(228):DG(163) DA(229):DT(162) DT(230):DA(161) DA(231):DT(160) DA(232):DT(159) DA(233):DT(158) DA(234):DT(157) DA(235):DT(156) DA(236):DT(155) DG(237):DC(154) DA(238):DT(153) DT(239):DA(152) DG(240):DC(151) DC(241):DG(150) DG(242):DC(149) DA(243):DT(148) DA(244):DT(147) DA(245):DT(146) DA(246):DT(145) DA(247):DT(144) DT(248):DA(143) DG(249):DC(142) DT(250):DA(141) DG(251):DC(140) DA(252):DT(139) DT(253):DA(138) DC(254):DG(137) DT(255):DA(136) DA(256):DT(135) DG(257):DC(134) DA(258):DT(133) DT(259):DA(132) DC(260):DG(131) DA(261):DT(130) DC(262):DG(129) DA(263):DT(128) DT(264):DA(127) DT(265):DA(126) DT(266):DA(125) DT(267):DA(124) DA(268):DT(123) DG(269):DC(122) DG(270):DC(121) DC(271):DG(120) DA(272):DT(119) DA(273):DT(118) DA(274):DT(117) DA(275):DT(116) DA(276):DT(115) DA(277):DT(114) DG(278):DC(113) chainD (300) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >6pbd_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=DNA N6-ADENINE METHYLTRANSFERASE CCRM IN COMPLEX WITH DOUBLE-STRANDED DNA OLIGONUCLEOTIDE CONTAINING ITS RECOGNITION SEQUENCE GAATC organism=Caulobacter vibrioides DNA sequence DC(Y2):DG(X19) DT(Y3):DA(X18) DT(Y4):DA(X17) DG(Y5):DC(X16) DG(Y6):DC(X15) DG(Y7):DC(X14) DA(Y8):DT(X13) DT(Y9):DA(X12) DT(Y10):DA(X11) DC(Y11):DG(X10) DA(Y12):DT(X9) DT(Y13):DA(X8) DT(Y14):DA(X7) DG(Y15):DC(X6) DA(Y16):DT(X5) DA(Y17):DT(X4) DT(Y18):DA(X3) DC(Y19):DG(X2) chainA ( 31) ASP31 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 34) TYR34 0 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 0 0 ( 36) LEU36 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 37) GLN37 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 38) LEU38 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 ( 42) LEU42 0 0 0 0 0 12 0 15 0 0 0 0 0 0 0 0 0 0 ( 44) ARG44 0 0 0 0 0 0 0 0 0 14 18 0 0 0 0 0 0 0 ( 45) PRO45 0 0 0 0 0 0 0 9 18 0 0 0 0 0 0 0 0 0 ( 46) ASP46 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 50) VAL50 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 52) ALA52 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 53) VAL53 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 57) TRP57 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 58) ASP58 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 63) PHE63 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 93) TYR93 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 ( 94) HIS94 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 (122) MET122 0 0 0 0 0 2 0 3 0 18 0 0 0 0 0 0 0 0 (123) PRO123 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 (124) ASN124 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 (125) PHE125 0 0 0 0 0 6 0 0 4 3 0 0 0 0 0 0 0 0 (126) LYS126 0 0 0 0 0 5 1 6 0 0 0 0 0 0 0 0 0 0 (128) THR128 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (129) ARG129 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (135) GLU135 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (173) LEU173 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (191) THR191 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 (193) LYS193 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 prot.sequence mkfgpetiihgdcieqmnalpeksvdlifaDppYnLQLggdLlRPDnskVdAVddhWDqfesFaaydkftrewlkaarrvlkddgaiwvigsYHnifrvgvavqdlgfwilndivwrksnpMPNFKgTRfanahEtliwasksqnakrytfnydalkmandevqmrsdwtipLctgeerikgadgqkahpTqKpeallyrvilsttkpgdvildpffgvgttgaaakrlgrkfigiereaeylehakariakvvpiapedraeprvpfgtiveagllspgdtlycskgthvakvrpdgsitvgdlsgsihkigalvqsapacngwtywhfktdaglapidvlraqvragm >6pbd_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=DNA N6-ADENINE METHYLTRANSFERASE CCRM IN COMPLEX WITH DOUBLE-STRANDED DNA OLIGONUCLEOTIDE CONTAINING ITS RECOGNITION SEQUENCE GAATC organism=Caulobacter vibrioides DNA sequence DG(X2):DC(Y19) DA(X3):DT(Y18) DT(X4):DA(Y17) DT(X5):DA(Y16) DC(X6):DG(Y15) DA(X7):DT(Y14) DA(X8):DT(Y13) DT(X9):DA(Y12) DG(X10):DC(Y11) DA(X11):DT(Y10) DA(X12):DT(Y9) DT(X13):DA(Y8) DC(X14):DG(Y7) DC(X15):DG(Y6) DC(X16):DG(Y5) DA(X17):DT(Y4) DA(X18):DT(Y3) DG(X19):DC(Y2) chainA ( 31) ASP31 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 34) TYR34 0 0 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 0 ( 36) LEU36 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 37) GLN37 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 38) LEU38 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 ( 42) LEU42 0 0 0 0 0 0 0 0 0 0 15 0 12 0 0 0 0 0 ( 44) ARG44 0 0 0 0 0 0 0 18 14 0 0 0 0 0 0 0 0 0 ( 45) PRO45 0 0 0 0 0 0 0 0 0 18 9 0 0 0 0 0 0 0 ( 46) ASP46 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 50) VAL50 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 52) ALA52 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 53) VAL53 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 57) TRP57 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 58) ASP58 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 63) PHE63 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 93) TYR93 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 ( 94) HIS94 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 (122) MET122 0 0 0 0 0 0 0 0 18 0 3 0 2 0 0 0 0 0 (123) PRO123 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 (124) ASN124 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 (125) PHE125 0 0 0 0 0 0 0 0 3 4 0 0 6 0 0 0 0 0 (126) LYS126 0 0 0 0 0 0 0 0 0 0 6 1 5 0 0 0 0 0 (128) THR128 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (129) ARG129 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (135) GLU135 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (173) LEU173 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (191) THR191 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 (193) LYS193 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 chainB ( 79) GLN104 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 84) TRP109 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 ( 85) ILE110 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (243) ARG268 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (247) ARG272 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (292) HIS317 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 (303) ALA328 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (305) ASN330 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence mkfgpetiihgdcieqmnalpeksvdlifaDppYnLQLggdLlRPDnskVdAVddhWDqfesFaaydkftrewlkaarrvlkddgaiwvigsYHnifrvgvavqdlgfwilndivwrksnpMPNFKgTRfanahEtliwasksqnakrytfnydalkmandevqmrsdwtipLctgeerikgadgqkahpTqKpeallyrvilsttkpgdvildpffgvgttgaaakrlgrkfigiereaeylehakariakvvpiapedraeprvpfgtiveagllspgdtlycskgthvakvrpdgsitvgdlsgsihkigalvqsapacngwtywhfktdaglapidvlraqvragm/fgpetiihgdcieqmnalpeksvdlifadppynlqlsfaaydkftrewlkaarrvlkddgaiwvigsyhnifrvgvavQdlgfWIlndivwrksnpmpnfkgtrfanahetliwasksqnakrytfnydalkmandevqmrsdwtiplctgeerikgadgqkahptqkpeallyrvilsttkpgdvildpffgvgttgaaakrlgrkfigiereaeylehakariakvvpiapedldvmgskRaepRvpfgtiveagllspgdtlycskgthvakvrpdgsitvgdlsgsiHkigalvqsapAcNgwtywhfktdaglapidvlraqvrag >6ph5_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY PRODUCT COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH AN EXTRA-HELICAL TEMPLATE BASE organism=Homo sapiens DNA sequence DG(T6):DC(P11) DG(T8):DC(P10) DC(T9):DG(P9) DG(T10):DC(P8) DC(T11):DG(P7) DA(T12):DT(P6) DT(T13):DA(P5) DC(T14):DG(P4) DA(T15):DT(P3) DG(T16):DC(P2) DC(T17):DG(P1) chainA (223) LYS234 0 0 3 6 0 0 0 0 0 0 0 (225) MET236 0 0 1 0 0 0 0 0 0 0 0 (260) TYR271 7 0 0 0 0 0 0 0 0 0 0 (261) PHE272 5 0 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetKfMgvcqlpskndekeyphrridirlipkdqyycgvlYFtgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6ph6_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH 2NT-GAP WITH DCTP BOUND DOWNSTREAM organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 27 ( 26) LYS35 0 0 0 0 5 ( 29) ALA38 0 0 0 0 3 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6pij_AG: title=TARGET DNA-BOUND V. CHOLERAE TNIQ-CASCADE COMPLEX, CLOSED CONFORMATION organism=VIBRIO CHOLERAE DNA sequence DG(253):DC(35) DG(254):DC(34) DC(255):DG(33) DG(256):DC(32) DG(257):DC(31) chainA chainG (114) SER130 5 3 0 0 0 (115) LYS131 0 2 7 6 0 (230) ARG246 28 0 0 0 0 (232) THR248 2 0 0 0 0 (233) ASN249 9 4 0 0 0 prot.sequence klptnlayersidpsdvcffvvwpddrktpltynsrtllgqmeakslaydvsgqpiksataealaqgnphqvdfchvpygashiecsfsvsfsselrqpykcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvftekeaaaaaaaatqnsrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggmfqhkgd/lkeiiasnpddlttelkrafrpltphiaidgneidaltilvnltdkakckqklrdekwwascincvnyrqshnpkfpdirsegvirtqalgelpsfllssskippyhwsyshdSKyvnksafltnefcwdgeisclgellkdadhplwntlkklgcsqktckamakqladitlttinvtlapnyltqislpdsdtsyislspvaslsmqshfhqrlqdenrhsaitrfsRtTNmgvtamtcggafrmlksgakfsspphhrlnngsflvlpnirvcgatalsspvtvgipsltaffgfvhaferninrttssfrvesfaicvhqlhvekrgltaefvekgdgtisapatrddwqcdvvfslilntnfaqhidqdtlvtslpkrlargsakiaiddfkhinsfstletaieslpieagrwlslyaqsnnnlsdllaamtedhqlmascvgyhlleepkdkpnslrgykhaiaeciiglinsitfssetdpntifwslknyqnylvvqprsin >6pij_BCDE: title=TARGET DNA-BOUND V. CHOLERAE TNIQ-CASCADE COMPLEX, CLOSED CONFORMATION organism=VIBRIO CHOLERAE DNA sequence DA(231) DT(232) DG(233) DA(234) DA(235) DG(236) DC(237) DC(238) DA(239) DA(240) DG(241) DG(242) DC(243) DG(244) DT(245) DC(246) DC(247) DT(248) DG(249) DT(250) DA(251) DA(252) DG(253) DG(254) DC(255) DG(256) DG(257) chainB ( 5) ASN6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 39) LEU40 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ASN69 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) PRO70 0 0 0 0 0 0 0 0 0 1 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) HIS71 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) LYS102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (226) PHE227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (232) SER243 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (335) MET346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 (337) GLN348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 chainC ( 5) ASN6 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ASN69 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) PRO70 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) HIS71 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) LYS102 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) PHE227 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LYS230 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) GLN241 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) SER243 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) MET346 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) GLN348 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 5) ASN6 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) HIS71 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) PHE227 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (335) MET346 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 5) ASN6 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) LYS102 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (335) MET346 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) GLN348 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klptNlayersidpsdvcffvvwpddrktpltynsrtlLgqmeakslaydvsgqpiksataealaqgNPHqvdfchvpygashiecsfsvsfsselrqpyKcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFtekqnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggMfQhk/klptNlayersidpsdvcffvvwpddrktpltynsrtllgqmeakslaydvsgqpiksataealaqgNPHqvdfchvpygashiecsfsvsfsselrqpyKcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFteKatQnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggMfQh/klptNlayersidpsdvcffvvwpddrktpltynsrtllgqmeakslaydvsgqpiksataealaqgnpHqvdfchvpygashiecsfsvsfsselrqpykcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFtekqnsrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggMfqh/klptNlayersidpsdvcffvvwpddrktpltynsrtllgqmeakslaydvsgqpiksataealaqgnphqvdfchvpygashiecsfsvsfsselrqpyKcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvftekqnsrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggMfQhk >6pij_C: title=TARGET DNA-BOUND V. CHOLERAE TNIQ-CASCADE COMPLEX, CLOSED CONFORMATION organism=VIBRIO CHOLERAE DNA sequence DA(231) DT(232) DG(233) DA(234) DA(235) DG(236) DC(237) DC(238) DA(239) DA(240) DG(241) DG(242) DC(243) DG(244) DT(245) DC(246) DC(247) DT(248) DG(249) DT(250) DA(251) DA(252) DG(253) DG(254) DC(255) DG(256) DG(257) chainC ( 5) ASN6 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ASN69 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) PRO70 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) HIS71 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) LYS102 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) PHE227 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LYS230 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) GLN241 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) SER243 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) MET346 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) GLN348 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klptNlayersidpsdvcffvvwpddrktpltynsrtllgqmeakslaydvsgqpiksataealaqgNPHqvdfchvpygashiecsfsvsfsselrqpyKcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFteKatQnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggMfQh >6pkz_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA N279A COMPLEXED WITH 8OA IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE GTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 38 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 4 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifaknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6pl7_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF HUMAN DNA POLYMERASE ETA COMPLEXED WITH A IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE TTP organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 0 5 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >6pl8_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF HUMAN DNA POLYMERASE ETA COMPLEXED WITH 8OA IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE TTP organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (376) LEU378 0 0 0 0 0 2 2 0 (380) ARG382 0 0 18 10 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >6plc_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF HUMAN DNA POLYMERASE ETA COMPLEXED WITH 8OA IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE GTP organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 4 0 (376) LEU378 0 0 0 0 0 2 4 0 (380) ARG382 0 0 13 6 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >6pmi_CDF: title=SIGM28-TRANSCRIPTION INITIATION COMPLEX WITH SPECIFIC PROMOTER AT THE STATE 1 organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI O45:K1 (STRAIN S88 / EXPEC) / ESCHERICHIA COLI O157:H7 / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI O45:K1 (STRAIN S88 / EXPEC) DNA sequence DA(135):DT(254) DG(136):DC(253) DC(137):DG(252) DA(138):DT(251) DA(139):DT(250) DT(140):DA(249) DA(141):DT(248) DA(142):DT(247) DA(143):DT(246) DG(144):DC(245) DT(145):DA(244) DT(146):DA(243) DT(147):DA(242) DC(148):DG(241) DT(150):DA(239) DT(151):DA(238) DC(152):DG(237) DC(153):DG(236) DC(155):DG(234) DC(156):DG(233) DT(157):DA(232) DT(158):DA(231) DG(159):DC(230) DC(160):DG(228) DG(162):DC(227) DA(163):DT(226) DT(164):DA(225) DA(165):DT(224) DA(166):DT(223) DC(167):DC(222) DG(168):DG(221) DA(169):DA(220) DG(170):DG(219) DA(171):DA(218) DT(172):DT(217) DC(173):DG(216) DA(174):DT(215) DA(175):DT(214) DC(176):DG(213) DT(177):DA(212) DT(178):DA(211) DG(179):DC(210) DT(180):DA(28) DT(182):DA(27) DG(183):DC(26) DC(184):DG(25) DG(185):DC(24) DG(186):DC(23) DC(187):DG(22) chainC (141) ARG143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 9 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 17 3 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (512) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 chainD (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 chainF ( 21) PRO22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) HIS26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) LEU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) TYR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LEU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LEU83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ASP87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) LEU143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) TRP149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ARG150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) GLU151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 17 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ASP155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingteRvivsqlhrspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveRavkerlslgdldtlmpqdminakpisaavkeffgssqlsqFmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/nslytaegvmdkhslwqryvPlvRHealrlqVRLpasvelddllqaggigllnaverydalQgTafttYavQRirgamLdeLrsrDwvpRsvRrnarevaqaigqleqelgrnatetevaerlgidiadyrqmlldtnnsqLfsydeWREehgDsielvtddhqrenplqqlldsnlrqrvmeaietlpereklvltlyyqeelnlkeigavlevgesrvsqlhsqaikrlrtklgkll >6pmi_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=SIGM28-TRANSCRIPTION INITIATION COMPLEX WITH SPECIFIC PROMOTER AT THE STATE 1 organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(22):DC(187) DC(23):DG(186) DC(24):DG(185) DG(25):DC(184) DC(26):DG(183) DA(27):DT(182) DA(28):DT(180) DC(210):DG(179) DA(211):DT(178) DA(212):DT(177) DG(213):DC(176) DT(214):DA(175) DT(215):DA(174) DG(216):DC(173) DT(217):DT(172) DA(218):DA(171) DG(219):DG(170) DA(220):DA(169) DG(221):DG(168) DC(222):DC(167) DT(223):DA(166) DT(224):DA(165) DA(225):DT(164) DT(226):DA(163) DC(227):DG(162) DG(228):DC(160) DC(230):DG(159) DA(231):DT(158) DA(232):DT(157) DG(233):DC(156) DG(234):DC(155) DG(236):DC(153) DG(237):DC(152) DA(238):DT(151) DA(239):DT(150) DG(241):DC(148) DA(242):DT(147) DA(243):DT(146) DA(244):DT(145) DC(245):DG(144) DT(246):DA(143) DT(247):DA(142) DT(248):DA(141) DA(249):DT(140) DT(250):DA(139) DT(251):DA(138) DG(252):DC(137) DC(253):DG(136) DT(254):DA(135) chainF ( 21) PRO22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) HIS26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) LEU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) TYR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LEU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LEU83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ASP87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) LEU143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) TRP149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ARG150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) GLU151 0 0 0 0 0 0 0 0 0 0 0 0 0 3 17 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ASP155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nslytaegvmdkhslwqryvPlvRHealrlqVRLpasvelddllqaggigllnaverydalQgTafttYavQRirgamLdeLrsrDwvpRsvRrnarevaqaigqleqelgrnatetevaerlgidiadyrqmlldtnnsqLfsydeWREehgDsielvtddhqrenplqqlldsnlrqrvmeaietlpereklvltlyyqeelnlkeigavlevgesrvsqlhsqaikrlrtklgkll >6pmj_CDF: title=SIGM28-TRANSCRIPTION INITIATION COMPLEX WITH SPECIFIC PROMOTER AT THE STATE 2 organism=ESCHERICHIA COLI O45:K1 (STRAIN S88 / EXPEC) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI O157:H7 / ESCHERICHIA COLI O45:K1 (STRAIN S88 / EXPEC) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(135):DT(254) DG(136):DC(253) DC(137):DG(252) DA(138):DT(251) DA(139):DT(250) DT(140):DA(249) DA(141):DT(248) DA(142):DT(247) DA(143):DT(246) DG(144):DC(245) DT(145):DA(244) DT(146):DA(243) DT(147):DA(242) DC(148):DG(241) DT(150):DA(239) DT(151):DA(238) DC(152):DG(237) DC(153):DG(236) DC(155):DG(234) DC(156):DG(233) DT(157):DA(232) DT(158):DA(231) DG(159):DC(230) DC(160):DG(228) DG(162):DC(227) DA(163):DT(226) DT(164):DA(225) DA(165):DT(224) DA(166):DT(223) DC(167):DC(222) DG(168):DG(221) DA(169):DA(220) DG(170):DG(219) DA(171):DA(218) DT(172):DT(217) DC(173):DG(216) DA(174):DT(215) DA(175):DT(214) DC(176):DG(213) DT(177):DA(212) DT(178):DA(211) DG(179):DC(210) DT(180):DA(28) DT(182):DA(27) DG(183):DC(26) DC(184):DG(25) DG(185):DC(24) DG(186):DC(23) DC(187):DG(22) chainC (173) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 (178) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 11 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 15 4 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (512) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 chainD (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 chainF ( 21) PRO22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) HIS26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) VAL33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) LEU35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) TYR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LEU80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LEU83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ASP87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) LEU143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) TRP149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ARG150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) GLU151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ASP155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynaRiipyRgsWlDfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveRavkerlslgdldtlmpqdminakpisaavkEffgssqlsqFmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/nslytaegvmdkhslwqryvPlvRHealrlqVRLpasvelddllqaggigllnaverydalQgTafttYavQRirgamLdeLrsrDwvpRsvRrnarevaqaigqleqelgrnatetevaerlgidiadyrqmlldtnnsqLfsydeWREehgDsielvtddhqrenplqqlldsnlrqrvmeaietlpereklvltlyyqeelnlkeigavlevgesrvsqlhsqaikrlrtklgkll >6pmj_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=SIGM28-TRANSCRIPTION INITIATION COMPLEX WITH SPECIFIC PROMOTER AT THE STATE 2 organism=ESCHERICHIA COLI O157:H7 DNA sequence DG(22):DC(187) DC(23):DG(186) DC(24):DG(185) DG(25):DC(184) DC(26):DG(183) DA(27):DT(182) DA(28):DT(180) DC(210):DG(179) DA(211):DT(178) DA(212):DT(177) DG(213):DC(176) DT(214):DA(175) DT(215):DA(174) DG(216):DC(173) DT(217):DT(172) DA(218):DA(171) DG(219):DG(170) DA(220):DA(169) DG(221):DG(168) DC(222):DC(167) DT(223):DA(166) DT(224):DA(165) DA(225):DT(164) DT(226):DA(163) DC(227):DG(162) DG(228):DC(160) DC(230):DG(159) DA(231):DT(158) DA(232):DT(157) DG(233):DC(156) DG(234):DC(155) DG(236):DC(153) DG(237):DC(152) DA(238):DT(151) DA(239):DT(150) DG(241):DC(148) DA(242):DT(147) DA(243):DT(146) DA(244):DT(145) DC(245):DG(144) DT(246):DA(143) DT(247):DA(142) DT(248):DA(141) DA(249):DT(140) DT(250):DA(139) DT(251):DA(138) DG(252):DC(137) DC(253):DG(136) DT(254):DA(135) chainD (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >6ppr_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF ADNA(D934A)-ADNB(D1014A) IN COMPLEX WITH AMPPNP AND DNA organism=MYCOBACTERIUM SMEGMATIS DNA sequence DT(X58) DT(X57) DG(X56) DT(X55) DT(X54) DT(X53) DT(X52) DT(X0) DT(X1) DT(X2) DT(X3) DT(X4):DT(X52) DC(X5):DA(X51) DT(X6):DG(X50) DA(X7):DA(X49) DT(X48) DA(X8):DT(X47) DT(X9):DA(X46) DG(X10):DC(X45) DC(X11):DG(X44) DG(X12):DC(X43) DA(X13):DT(X42) chainA (605) SER799 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (606) THR800 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (621) ARG815 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (632) SER826 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (719) ARG918 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (741) SER940 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (742) PRO941 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence gvvrllgpgtgkssllvdtavqhilltgsarlrtaaraaitarltvhsyafavlrlsaeqdgiirellagdgwpeqlwpalttagfatelrdlmarctergvdpialqrlgrpewlaagrfaqayeqilgaaelvgaaleallldternriklllvddaqhldpqaarlvralaltviagdpdqshpaitltqsyrcapeiasaitglgqwtgnpqregtvtvrlaasthaegtmiadalrrahlvdgipwsqmavivrsvprvgtalaraltaagvpvqddvpvgrqpaaaalltvldvtatghldadsavalltgpigrvdpvtlrqlrralrradgsqpprdfgdllvdaierepkglsaehartlrrlravltaarrdprytlwqawhasglqrrwlaaserggsvgaqadrdldavttlfdvadqyvlrglvdhvavavlsvhgalagewdfvviagvqeglwpnmiprggvlgtqhlvdvllvaeerrllmaamgrartrvmitavdllpspfcaeisawatepplvaprvlapsalvgrlravvcapdaracaaaqlarlaaagvpgadpsqwhamtsltteeplwsepghvvtlspSTlqmltdcplrwlleRhggddgrdvrStvgslvhalvsepgktesqlvnelekvwddlpydakwysdnelarhramletftrwredtrrqltevateipvegivvepgvrvrgRldrlerdeagrlvvvalktgkSPvtkddaqnhaqlamyqlavaaglgdepgggklvylgkagatereqdpltpdkraewletvgeaaaatagprfvarvnngcancpvrsscpaq >6ppr_AB:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF ADNA(D934A)-ADNB(D1014A) IN COMPLEX WITH AMPPNP AND DNA organism=MYCOBACTERIUM SMEGMATIS DNA sequence DT(X58) DT(X57) DG(X56) DT(X55) DT(X54) DT(X53) DT(X52) DT(X0) DT(X1) DT(X2) DT(X3) DT(X4):DT(X52) DC(X5):DA(X51) DT(X6):DG(X50) DA(X7):DA(X49) DT(X48) DA(X8):DT(X47) DT(X9):DA(X46) DG(X10):DC(X45) DC(X11):DG(X44) DG(X12):DC(X43) DA(X13):DT(X42) chainB ( 58) PHE79 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG81 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) HIS120 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) LEU142 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) PHE254 4 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) TRP325 0 0 0 7 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) ARG326 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) ARG436 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (591) HIS665 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (613) SER687 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (605) SER799 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (606) THR800 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (621) ARG815 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (632) SER826 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (719) ARG918 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (741) SER940 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (742) PRO941 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence gvvrllgpgtgkssllvdtavqhilltgsarlrtaaraaitarltvhsyafavlrlsaeqdgiirellagdgwpeqlwpalttagfatelrdlmarctergvdpialqrlgrpewlaagrfaqayeqilgaaelvgaaleallldternriklllvddaqhldpqaarlvralaltviagdpdqshpaitltqsyrcapeiasaitglgqwtgnpqregtvtvrlaasthaegtmiadalrrahlvdgipwsqmavivrsvprvgtalaraltaagvpvqddvpvgrqpaaaalltvldvtatghldadsavalltgpigrvdpvtlrqlrralrradgsqpprdfgdllvdaierepkglsaehartlrrlravltaarrdprytlwqawhasglqrrwlaaserggsvgaqadrdldavttlfdvadqyvlrglvdhvavavlsvhgalagewdfvviagvqeglwpnmiprggvlgtqhlvdvllvaeerrllmaamgrartrvmitavdllpspfcaeisawatepplvaprvlapsalvgrlravvcapdaracaaaqlarlaaagvpgadpsqwhamtsltteeplwsepghvvtlspSTlqmltdcplrwlleRhggddgrdvrStvgslvhalvsepgktesqlvnelekvwddlpydakwysdnelarhramletftrwredtrrqltevateipvegivvepgvrvrgRldrlerdeagrlvvvalktgkSPvtkddaqnhaqlamyqlavaaglgdepgggklvylgkagatereqdpltpdkraewletvgeaaaatagprfvarvnngcancpvrsscpaq/lglfpptdeqaaviaappgplvviagagagktetmaarvvwlvangfatpsqvlgltFtRkaagqllrrvrtrlarlagagesatvstyHafagtllrehglllpvepdtrLlsetelwqlaydvvcahpghldtektpaavtamvlrlsgalaehlvdtdqlrdthvelerlvhtlpagppsqwllrmlatqtertelvplidalhqrmraekvmdFgmqmaaaarlaarfpqvgeqlrqrfrvvlldeyqdtghaqrialsslfgggaddglaltavgdpiqsiygWRgasatnlprfttdfpysdgtpaptlelrtswrnppstlhvanavseearalrprircallnnvaaerdwvadhlarayhgaaavlvRrnadaapmaealtargvpvevvgllavpevadlvamlrliadptagsavmriltgprwrfgardiaalwrraveldgtadivaqaapdadtacvadaicdpgdaeryspagyerivalgreltmlrahlghplpelvaevrrvlgldaearaarpvaagwagtenldrfsdlvsdfaggasvsallayldaavevenglapaeltvrvqiltvHaakglewqvvavphlsarvfpSttqartwltdasdlppllrgdrgvpvldtsdiydrkilsdkisdhkksldqrrvdeerrllyvaitraedtlllsghhwgateskprgpseflcelktileeeiehwplrdqvvealwhvhrgaqlvaaamgwaadvdallaererp >6ppr_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF ADNA(D934A)-ADNB(D1014A) IN COMPLEX WITH AMPPNP AND DNA organism=MYCOBACTERIUM SMEGMATIS DNA sequence DT(X58) DT(X57) DG(X56) DT(X55) DT(X54) DT(X53) DT(X52) DT(X0) DT(X1) DT(X2) DT(X3) DT(X4):DT(X52) DC(X5):DA(X51) DT(X6):DG(X50) DA(X7):DA(X49) DT(X48) DA(X8):DT(X47) DT(X9):DA(X46) DG(X10):DC(X45) DC(X11):DG(X44) DG(X12):DC(X43) DA(X13):DT(X42) chainB ( 58) PHE79 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG81 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) HIS120 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) LEU142 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) PHE254 4 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) TRP325 0 0 0 7 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) ARG326 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) ARG436 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (591) HIS665 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (613) SER687 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lglfpptdeqaaviaappgplvviagagagktetmaarvvwlvangfatpsqvlgltFtRkaagqllrrvrtrlarlagagesatvstyHafagtllrehglllpvepdtrLlsetelwqlaydvvcahpghldtektpaavtamvlrlsgalaehlvdtdqlrdthvelerlvhtlpagppsqwllrmlatqtertelvplidalhqrmraekvmdFgmqmaaaarlaarfpqvgeqlrqrfrvvlldeyqdtghaqrialsslfgggaddglaltavgdpiqsiygWRgasatnlprfttdfpysdgtpaptlelrtswrnppstlhvanavseearalrprircallnnvaaerdwvadhlarayhgaaavlvRrnadaapmaealtargvpvevvgllavpevadlvamlrliadptagsavmriltgprwrfgardiaalwrraveldgtadivaqaapdadtacvadaicdpgdaeryspagyerivalgreltmlrahlghplpelvaevrrvlgldaearaarpvaagwagtenldrfsdlvsdfaggasvsallayldaavevenglapaeltvrvqiltvHaakglewqvvavphlsarvfpSttqartwltdasdlppllrgdrgvpvldtsdiydrkilsdkisdhkksldqrrvdeerrllyvaitraedtlllsghhwgateskprgpseflcelktileeeiehwplrdqvvealwhvhrgaqlvaaamgwaadvdallaererp >6ppu_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF ADNAB-AMPPNP-DNA COMPLEX organism=? DNA sequence DT(X4):DA(X52) DC(X5):DG(X51) DT(X6):DA(X50) DA(X7):DT(X49) DA(X8):DT(X48) DT(X9):DA(X47) DG(X10):DC(X46) DC(X11):DG(X45) DG(X12):DC(X44) DA(X13):DT(X43) chainA (512) SER940 4 0 0 0 0 0 0 0 0 0 prot.sequence xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgtvtvrlaasthaegtmiadalrrahlvdgipwsqmavivrsvltaagvpvqpvgrqpaaaalltvldvtatghldadsavalltpigrvdpvtlrqlrralrradgsqpprdfgdllvdaierepkaehartlrrlravltaarrsdprytlwqawhasrrwlaaserggsvgaqadrdldavttlfdvadqyvlrglvdhvtraeavavlsvhwdfvviagvqeglwpnqhlvdvvaeerrllrvmitavdsxxxxxxxxxxxxxpplvaprvlapsalvgrlravvcapracaaaqlarlaaagvpgadpsqwhamtsltteeplwsephvvtlspstlqmltdcplrwllerhggddgrdvrstvgslvhalvsepgktesqlvnelekvwddlpydakwysdnelarhramletftrwredtrltevateipvegivvepgvrvrgrldrlerdeagrlvvvdlktgkSpvtkddaqnhaqlamyqlavaaglepgggklvylgkatereqdpltpdkraewletvgeaaaatagprfvarvnngcancpvrsscpaq >6ppu_AB:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF ADNAB-AMPPNP-DNA COMPLEX organism=? DNA sequence DT(X4):DA(X52) DC(X5):DG(X51) DT(X6):DA(X50) DA(X7):DT(X49) DA(X8):DT(X48) DT(X9):DA(X47) DG(X10):DC(X46) DC(X11):DG(X45) DG(X12):DC(X44) DA(X13):DT(X43) chainB chainA (512) SER940 4 0 0 0 0 0 0 0 0 0 prot.sequence xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgtvtvrlaasthaegtmiadalrrahlvdgipwsqmavivrsvltaagvpvqpvgrqpaaaalltvldvtatghldadsavalltpigrvdpvtlrqlrralrradgsqpprdfgdllvdaierepkaehartlrrlravltaarrsdprytlwqawhasrrwlaaserggsvgaqadrdldavttlfdvadqyvlrglvdhvtraeavavlsvhwdfvviagvqeglwpnqhlvdvvaeerrllrvmitavdsxxxxxxxxxxxxxpplvaprvlapsalvgrlravvcapracaaaqlarlaaagvpgadpsqwhamtsltteeplwsephvvtlspstlqmltdcplrwllerhggddgrdvrstvgslvhalvsepgktesqlvnelekvwddlpydakwysdnelarhramletftrwredtrltevateipvegivvepgvrvrgrldrlerdeagrlvvvdlktgkSpvtkddaqnhaqlamyqlavaaglepgggklvylgkatereqdpltpdkraewletvgeaaaatagprfvarvnngcancpvrsscpaq/lglfpptdeqaaviaappgplvviagagagktetmaarvvwlvangfatpsqvlgltftrkaagqllrrvrtrlarlatvstyhafagtllrehglllpvepdtrllsetelwqlaydvvcahpghldtektpaavtamvlrlsgalaehlvdtdqlrdthvelerlvhtlpagpsqwllrmlatqtertelvplidalhqrmraekvmdfgmqmaaaarlaarfpqvgeqlrqrfrvvlldeyqdtghaqrialsslfgggaddglaltavgdpiqsiygwrgaslprfttdfpygtpaptlelrtswrnppstlhvanavseearrvralrprepgtircallnnvaaerdwvadhlarayhgptaavlvrrnadaapmaealtargvpvevgllavpevadlvamlrliadptagsavmriltgprwrfgardiaalwrraveldlgtadivaqaapdadtacvadaicdpgdaeryspagyerivalgreltmlrahlghplpelvaEvrrvlgldaearaarpvaagwagtenldrfsdlvsdfagasvsallayldaavevenglapaqiltvhaakglewqvvavphlsarvfpstartwltdasdlppllrgdragvpvldtsdiydrkilsdkisdhkksldqrrvdeerrllyvaitraedtlllsghhwgateskprgpseflcelktileegeiehwplrdqvvealwpdhvhrgaqlvaaamegwaadvdallaererp >6pqr_A: title=CRYO-EM STRUCTURE OF HZTRANSIB/INTACT TIR SUBSTRATE DNA PRE-REACTION COMPLEX (PRC) organism=? DNA sequence DA(E11):DT(F22) DG(E12):DC(F21) DA(E13):DT(F20) DT(E14):DA(F19) DC(E15):DG(F18) DT(E16):DA(F17) DC(E17):DG(F16) DA(E18):DT(F15) DC(E19):DG(F14) DG(E20):DC(F13) DG(E21):DC(F12) DT(E22):DA(F11) DG(E23):DC(F10) DG(E24):DC(F9) DA(E25):DT(F8) DT(E26):DA(F7) DC(E27):DG(F6) DG(E28):DC(F5) DA(E29):DT(F4) DA(E30):DT(F3) DA(E31):DT(F2) DA(E32):DT(F1) chainA ( 20) LYS40 0 0 0 0 0 0 0 0 0 0 0 0 3 6 2 0 0 0 0 0 0 0 ( 43) TYR63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 ( 46) GLN66 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (410) ARG450 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 (411) LYS451 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 (412) LYS452 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 prot.sequence stifspekalglllslklsKwqyitlrettiregskeiypsyYkvQkaklqcyppkafvavtdssakialqalldltvnrifetirspdaiqnkqliliskwgfdgasnqgdssifmtslvplkltadgdtvwvnpkpcspmycrpvqfsfvketkdvvinektamddeiealvpskcqgheishklmmtmidgkictylseaksnaacylclldviasktissgvyefglstlarinvmecllhiayrldfkkwsargeghqellhsrkkliqdrfkddlnllidivkqgsgttndgntarrffefpdktaaitgldedlirrfsvilqaitsgeiidvpkfkeyarttaekyvelydwyymsstvhkllihggdiiaenaivpigslseeasearnkdfrrfrehhsRKKsrqasnedilnmliissdplisftrpkldahkrqtyfketvellqlqdqeaptefh >6pqu_E: title=CRYO-EM STRUCTURE OF HZTRANSIB/NICKED TIR SUBSTRATE DNA PRE-REACTION COMPLEX (PRC) organism=? DNA sequence DT(D1):DA(C32) DT(D2):DA(C31) DT(D3):DA(C30) DT(D4):DA(C29) DC(D5):DG(C28) DG(D6):DC(C27) DA(D7):DT(C26) DT(D8):DA(C25) DC(D9):DG(C24) DC(D10):DG(C23) DA(D11):DT(C22) DC(D12):DG(C21) DC(D13):DG(C20) DG(D14):DC(C19) DT(D15):DA(C18) DG(D16):DC(C17) DA(D17):DT(B16) DG(D18):DC(B15) DA(D19):DT(B14) DT(D20):DA(B13) DC(D21):DG(B12) DT(D22):DA(B11) DA(D23):DT(B10) DG(D24):DC(B9) DG(D25):DC(B8) DC(D26):DG(B7) DC(D27):DG(B6) DA(D28):DT(B5) DG(D29):DC(B4) DA(D30):DT(B3) DT(D31):DA(B2) chainE ( 20) LYS40 0 0 0 0 0 0 0 2 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR63 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (410) ARG450 0 0 0 0 0 0 0 0 0 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) LYS451 0 0 0 0 0 0 0 0 0 0 2 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) LYS452 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stifspekalglllslklsKwqyitlrettiregskeiypsyYkvqkaklqcyppkafvavtdssakialqalldltvnrifetirspdaiqnkqliliskwgfdgasnqgdssifmtslvplkltadgdtvwvnpkpcspmycrpvqfsfvketkdvvinektamddeiealvpskcqgheishklmmtmidgkictylseaksnaacylclldviasktissgvyefglstlarinvmecllhiayrldfkkwsargeghqellhsrkkliqdrfkddlnllidivkqgsgttndgntarrffefpdktaaitgldedlirrfsvilqaitsgeiidvpkfkeyarttaekyvelydwyymsstvhkllihggdiiaenaivpigslseeasearnkdfrrfrehhsRKKsrqasnedilnmliissdplisftrpkldahkrqtyfketvellqlqdqeaptefh >6pqx_E: title=CRYO-EM STRUCTURE OF HZTRANSIB/NICKED TIR SUBSTRATE DNA HAIRPIN FORMING COMPLEX (HFC) organism=? DNA sequence DA(G18):DT(H15) DC(G19):DG(H14) DG(G20):DC(H13) DG(G21):DC(H12) DT(G22):DA(H11) DG(G23):DC(H10) DG(G24):DC(H9) DA(G25):DT(H8) DT(G26):DA(H7) DC(G27):DG(H6) DG(G28):DC(H5) DA(G29):DT(H4) DA(G30):DT(H3) DA(G31):DT(H2) DA(G32):DT(H1) chainE (317) ASP337 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ASN339 2 8 8 0 0 0 0 0 0 0 0 0 0 0 0 (322) ARG342 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) GLU432 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (419) LYS439 7 7 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stifspekalglllslklskwqyitlrettiregskeiypsyykvqkaklqcyppkafvavtdssakialqalldltvnrifetirspdaiqnkqliliskwgfdgasnqsrykqniesgqgdssifmtslvplkltadgdtvwvnpkpcspmycrpvqfsfvketkdvvinektamddeiealvpskcqgheishklmmtmidgkictylseaksnaacylclakptemskldviasktissgvyefglstlharinvmecllhiayrldfkkwsargeghqellhsrkkliqdrfkddlnllidivkqgsgttnDgNtaRrffefpdktaaitgldedlirrfsvilqaitsgeiidvpkfkeyarttaekyvelydwyymsstvhkllihggdiiaenaivpigslseEasearnKdfrrfrehhsrkksrqasnedilnmliissdplisftrpkldahkrqtyfketvellqlqd >6pqy_D: title=CRYO-EM STRUCTURE OF HZTRANSIB/TIR DNA TRANSPOSON END COMPLEX (TEC) organism=HELICOVERPA ZEA DNA sequence DC(B17):DG(C16) DA(B18):DT(C15) DC(B19):DG(C14) DG(B20):DC(C13) DG(B21):DC(C12) DT(B22):DA(C11) DG(B23):DC(C10) DG(B24):DC(C9) DA(B25):DT(C8) DT(B26):DA(C7) DC(B27):DG(C6) DG(B28):DC(C5) DA(B29):DT(C4) DA(B30):DT(C3) DA(B31):DT(C2) DA(B32):DT(C1) chainD ( 20) LYS40 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 ( 43) TYR63 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 (403) ARG450 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 (404) LYS451 0 0 0 0 12 4 0 0 0 0 0 0 0 0 0 0 (405) LYS452 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 prot.sequence stifspekalglllslklsKwqyitlrettiregskeiypsyYkvqkaklqcyppkafvavtdssakialqalldltvnrifetirspdaiqnkqliliskwgfdgasnqsrykqgdssifmtslvplkltadgdtvwvnpkpcspmycrpvqfsfvketkdvvinektamddeiealvpskcqgheishklmmtmidgkictylseaksnaacylclyefglstlharinvmecllhiayrldfkkwsargeghqellhsrkkliqdrfkddlnllidivkqgsgttndgntarrffefpdktaaitgldedlirrfsvilqaitsgeiidvpkfkeyarttaekyvelydwyymsstvhkllihggdiiaenaivpigslseeasearnkdfrrfrehhsRKKsrqasnedilnmliissdplisftrpkldahkrqtyfketvellqlqdqeaptef >6pr5_E: title=CRYO-EM STRUCTURE OF HZTRANSIB STRAND TRANSFER COMPLEX (STC) organism=HELICOVERPA ZEA DNA sequence DT(F1):DA(D30) DT(F2):DA(D29) DT(F3):DA(D28) DT(F4):DA(D27) DC(F5):DG(D26) DG(F6):DC(D25) DA(F7):DT(D24) DT(F8):DA(D23) DC(F9):DG(D22) DC(H17):DG(D21) DA(H18):DT(D20) DC(H19):DG(D19) DC(H20):DG(D18) chainE (206) LYS226 0 0 0 0 0 0 0 6 1 0 0 0 0 (216) SER236 0 0 0 0 0 1 0 0 0 0 0 0 0 (217) ASN237 0 0 0 0 0 0 7 4 0 0 0 0 0 (278) ARG298 0 2 6 6 0 0 0 0 0 0 0 0 0 (308) VAL328 0 0 0 0 0 0 0 0 0 14 12 0 0 (310) GLN330 0 0 0 0 0 0 0 0 0 0 3 9 5 (314) THR334 0 0 0 0 0 0 0 0 0 11 0 0 0 prot.sequence stifspekalglllslklskwqyitlrettiregskeiypsyykvqkaklqcyppkafvavtdssakialqalldltvnrifetirspdaiqnkqliliskwgfdgasnqsrykqniesgqgdssifmtslvplkltadgdtvwvnpkpcspmycrpvqfsfvketkdvvinektamddeiealvpskcqgheishklmmtmidgKictylseakSNaacylclakptemskldviasktissgvyefglstlharinvmecllhiayrldfkkwsaRgeghqellhsrkkliqdrfkddlnllidiVkQgsgTtndgntarrffefpdktaaitgldedlirrfsvilqaitsgeiidvpkfkeyarttaekyvelydwyymsstvhkllihggdiiaenaivpigslseeasearnkdfrrfrehhsrkksrqasnedilnmliissdplisftrpkldahkrqtyfketvellqlqd >6psq_ILM:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI RNA POLYMERASE CLOSED COMPLEX (TRPC) WITH TRAR AND RPST P2 PROMOTER organism=ESCHERICHIA COLI DNA sequence DA(P21):DT(O65) DA(P22):DT(O64) DA(P23):DT(O63) DG(P24):DC(O62) DG(P25):DC(O61) DC(P26):DG(O60) DC(P27):DG(O59) DG(P28):DC(O58) DA(P29):DT(O57) DG(P30):DC(O56) DG(P31):DC(O55) DA(P32):DT(O54) DA(P33):DT(O53) DT(P34):DA(O52) DA(P35):DT(O51) DT(P36):DA(O50) DG(P37):DC(O49) DC(P38):DG(O48) DC(P39):DG(O47) DC(P40):DG(O46) DT(P41):DA(O45) DT(P42):DA(O44) DT(P43):DA(O43) DT(P44):DA(O42) DA(P45):DT(O41) DG(P46):DC(O40) DC(P47):DG(O39) DC(P48):DG(O38) DT(P49):DA(O37) DT(P50):DA(O36) DC(P51):DG(O35) DT(P52):DA(O34) DT(P53):DA(O33) DT(P54):DA(O32) DT(P55):DA(O31) DG(P56):DC(O30) DT(P57):DA(O29) DC(P58):DG(O28) DA(P59):DT(O27) DA(P60):DT(O26) DT(P61):DA(O25) DG(P62):DC(O24) DG(P63):DC(O23) DA(P64):DT(O22) DT(P65):DA(O21) DT(P66):DA(O20) DT(P67):DA(O19) DG(P68):DC(O18) DT(P69):DA(O17) DG(P70):DC(O16) chainI chainL (393) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (511) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (521) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (522) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (523) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 2 0 0 0 0 0 0 0 0 0 0 (524) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (526) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (527) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 chainM prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/sqlkllvtrgkeqgyltyaevndhlpedivdsdqiediiqmindmgiqvmeeapdaddlmntadedaaeaaaqvlssveseigrttdpvrmymremgtvelltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpelarekfaelraqyvvtrdtiataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlrlvisiakkytnrglqfldliqegniglmkavdkfeyrrgykfstyatwwirqaitrsiadqartiripvHmietinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvTRERiRQieakalrklrhpsrsevlrsfldd/dpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >6psr_JLM:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI RNA POLYMERASE PROMOTER UNWINDING INTERMEDIATE (TRPI1) WITH TRAR AND RPST P2 PROMOTER organism=ESCHERICHIA COLI DNA sequence DC(P38):DG(O48) DC(P39):DG(O47) DC(P40):DG(O46) DT(P41):DA(O45) DT(P42):DA(O44) DT(P43):DA(O43) DT(P44):DA(O42) DA(P45):DT(O41) DG(P46):DC(O40) DC(P47):DG(O39) DC(P48):DG(O38) DT(P49):DA(O37) DT(P50):DA(O36) DC(P51):DG(O35) DT(P52):DA(O34) DT(P53):DA(O33) DT(P54):DA(O32) DT(P55):DA(O31) DG(P56):DC(O30) DT(P57):DA(O29) DC(P58):DG(O28) DA(P59):DT(O27) DA(P60):DT(O26) DT(P61):DA(O25) DG(P62):DC(O24) DG(P63):DC(O23) DA(P64):DT(O22) DT(P65):DA(O21) DT(P66):DA(O20) DT(P67):DA(O19) DG(P68):DC(O18) DT(P69):DA(O17) DG(P70):DC(O16) DC(P71):DG(O15) chainJ chainL (368) TRP433 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLN437 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (508) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (519) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (520) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 10 2 0 0 0 0 0 0 0 0 0 0 0 0 (521) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 (523) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (524) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 chainM ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhissiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/sqlkllvtrgkeqgyltyaevndhlpedivdsdqiediiqmindmgiqvmeelmlaentadedaaeaaaqvlssveseigrttdpvrmymremgtvelltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpelarekfaelraqyvvtrdtiataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlrlvisiakkytnrglqfldliqegniglmkavdkfeyrrgykfstyatWwirQaitrsiadqartiripvhmietinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvtRERiRQieakalrklrhpsrsevlrsfldd/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >6pss_ILM:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI RNA POLYMERASE PROMOTER UNWINDING INTERMEDIATE (TRPI1.5A) WITH TRAR AND MUTANT RPST P2 PROMOTER organism=ESCHERICHIA COLI DNA sequence DG(P28):DC(O58) DA(P29):DT(O57) DG(P30):DC(O56) DG(P31):DC(O55) DA(P32):DA(O54) DA(P33):DT(O53) DT(P34):DA(O52) DG(P35):DT(O51) DC(P36):DA(O50) DG(P37):DC(O49) DC(P38):DG(O48) DC(P39):DG(O47) DC(P40):DG(O46) DT(P41):DA(O45) DT(P42):DA(O44) DT(P43):DA(O43) DT(P44):DA(O42) DA(P45):DT(O41) DG(P46):DC(O40) DC(P47):DG(O39) DC(P48):DG(O38) DT(P49):DA(O37) DT(P50):DA(O36) DC(P51):DG(O35) DT(P52):DA(O34) DT(P53):DA(O33) DT(P54):DA(O32) DT(P55):DA(O31) DG(P56):DC(O30) DT(P57):DA(O29) DC(P58):DG(O28) DA(P59):DT(O27) DA(P60):DT(O26) DT(P61):DA(O25) DG(P62):DC(O24) DG(P63):DC(O23) DA(P64):DT(O22) DT(P65):DA(O21) DT(P66):DA(O20) DT(P67):DA(O19) DG(P68):DC(O18) DT(P69):DA(O17) DG(P70):DC(O16) chainI chainL (365) GLU420 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) ARG423 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) TYR425 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) LYS426 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) THR429 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (375) TYR430 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) TRP433 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) ARG436 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) GLN437 0 0 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) ARG441 0 0 0 0 0 0 0 0 0 0 5 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (403) GLU458 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (518) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (528) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (529) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (530) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 8 3 0 0 0 0 0 0 0 0 0 0 (531) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 (533) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 (534) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 chainM ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeiklqmelvperlrgtasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/sqlkllvtrgkeqgyltyaevndhlpedivdsdqiediiqmindmgiqvmeeapdaddlmlaentadedaaeaaaqvlssveseigrttdpvrmymremgtvelltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdidpelarekfaelraqyvvtrdtikhataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlrlvisiakkytnrglqfldliqegniglmkavdkfEyrRgYKfsTYatWwiRQaitRsiadqartiripvHmiEtinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvTRERiRQieakalrklrhpsrsevlrsfldd/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >6pss_M:C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=ESCHERICHIA COLI RNA POLYMERASE PROMOTER UNWINDING INTERMEDIATE (TRPI1.5A) WITH TRAR AND MUTANT RPST P2 PROMOTER organism=ESCHERICHIA COLI DNA sequence DC(O16):DG(P70) DA(O17):DT(P69) DC(O18):DG(P68) DA(O19):DT(P67) DA(O20):DT(P66) DA(O21):DT(P65) DT(O22):DA(P64) DC(O23):DG(P63) DC(O24):DG(P62) DA(O25):DT(P61) DT(O26):DA(P60) DT(O27):DA(P59) DG(O28):DC(P58) DA(O29):DT(P57) DC(O30):DG(P56) DA(O31):DT(P55) DA(O32):DT(P54) DA(O33):DT(P53) DA(O34):DT(P52) DG(O35):DC(P51) DA(O36):DT(P50) DA(O37):DT(P49) DG(O38):DC(P48) DG(O39):DC(P47) DC(O40):DG(P46) DT(O41):DA(P45) DA(O42):DT(P44) DA(O43):DT(P43) DA(O44):DT(P42) DA(O45):DT(P41) DG(O46):DC(P40) DG(O47):DC(P39) DG(O48):DC(P38) DC(O49):DG(P37) DA(O50):DC(P36) DT(O51):DG(P35) DA(O52):DT(P34) DT(O53):DA(P33) DA(O54):DA(P32) DC(O55):DG(P31) DC(O56):DG(P30) DT(O57):DA(P29) DC(O58):DG(P28) chainM ( 16) ARG265 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >6pst_ILM:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI RNA POLYMERASE PROMOTER UNWINDING INTERMEDIATE (TRPI1.5B) WITH TRAR AND MUTANT RPST P2 PROMOTER organism=ESCHERICHIA COLI DNA sequence DC(P20):DG(O66) DA(P21):DT(O65) DA(P22):DT(O64) DA(P23):DT(O63) DG(P24):DC(O62) DG(P25):DC(O61) DC(P26):DG(O60) DC(P27):DG(O59) DG(P28):DC(O58) DA(P29):DT(O57) DG(P30):DC(O56) DG(P31):DC(O55) DA(P33):DT(O53) DT(P34):DA(O52) DG(P35):DT(O51) DC(P36):DA(O50) DG(P37):DC(O49) DC(P38):DG(O48) DC(P39):DG(O47) DC(P40):DG(O46) DT(P41):DA(O45) DT(P42):DA(O44) DT(P43):DA(O43) DT(P44):DA(O42) DA(P45):DT(O41) DG(P46):DC(O40) DC(P47):DG(O39) DC(P48):DG(O38) DT(P49):DA(O37) DT(P50):DA(O36) DC(P51):DG(O35) DT(P52):DA(O34) DT(P53):DA(O33) DT(P54):DA(O32) DT(P55):DA(O31) DG(P56):DC(O30) DT(P57):DA(O29) DC(P58):DG(O28) DA(P59):DT(O27) DA(P60):DT(O26) DT(P61):DA(O25) DG(P62):DC(O24) DG(P63):DC(O23) DA(P64):DT(O22) DT(P65):DA(O21) DT(P66):DA(O20) DT(P67):DA(O19) DG(P68):DC(O18) DT(P69):DA(O17) DG(P70):DC(O16) chainM ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainI (374) GLU379 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (465) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (466) VAL471 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ALA474 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (488) ILE493 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (489) ASN494 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (493) ILE498 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL (337) LYS392 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) THR395 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 12 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (364) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) THR429 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (375) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (379) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (403) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (406) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (529) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (530) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 8 4 0 0 0 0 0 0 0 0 0 0 (531) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 0 0 (533) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 (534) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeiklqmelvperlrgtasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptrEaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRVerAvkerlslgdldtlmpqdmINakPIsaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/sqlkllvtrgkeqgyltyaevndhlpedivdsdqiediiqmindmgiqvmeeapdaddlmlaentadedaaeaaaqvlssveseigrttdpvrmymremgtvelltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdidpelarekfaelraqyvvtrdtikhataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlrlvisiaKkyTNRglqfldliqegniglmkavdkFEyrRgYkfsTYatWWirQaitRsiadqartiripvHmiEtiNklnrisRqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtRERiRQieakalrklrhpsrsevlrsfldd/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >6pst_M:C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=ESCHERICHIA COLI RNA POLYMERASE PROMOTER UNWINDING INTERMEDIATE (TRPI1.5B) WITH TRAR AND MUTANT RPST P2 PROMOTER organism=ESCHERICHIA COLI DNA sequence DC(P20):DG(O66) DA(P21):DT(O65) DA(P22):DT(O64) DA(P23):DT(O63) DG(P24):DC(O62) DG(P25):DC(O61) DC(P26):DG(O60) DC(P27):DG(O59) DG(P28):DC(O58) DA(P29):DT(O57) DG(P30):DC(O56) DG(P31):DC(O55) DA(P33):DT(O53) DT(P34):DA(O52) DG(P35):DT(O51) DC(P36):DA(O50) DG(P37):DC(O49) DC(P38):DG(O48) DC(P39):DG(O47) DC(P40):DG(O46) DT(P41):DA(O45) DT(P42):DA(O44) DT(P43):DA(O43) DT(P44):DA(O42) DA(P45):DT(O41) DG(P46):DC(O40) DC(P47):DG(O39) DC(P48):DG(O38) DT(P49):DA(O37) DT(P50):DA(O36) DC(P51):DG(O35) DT(P52):DA(O34) DT(P53):DA(O33) DT(P54):DA(O32) DT(P55):DA(O31) DG(P56):DC(O30) DT(P57):DA(O29) DC(P58):DG(O28) DA(P59):DT(O27) DA(P60):DT(O26) DT(P61):DA(O25) DG(P62):DC(O24) DG(P63):DC(O23) DA(P64):DT(O22) DT(P65):DA(O21) DT(P66):DA(O20) DT(P67):DA(O19) DG(P68):DC(O18) DT(P69):DA(O17) DG(P70):DC(O16) chainM ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 prot.sequence dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >6psu_IJLM:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI RNA POLYMERASE PROMOTER UNWINDING INTERMEDIATE (TRPI2) WITH TRAR AND RPST P2 PROMOTER organism=ESCHERICHIA COLI DNA sequence DC(O16):DG(P70) DA(O17):DT(P69) DC(O18):DG(P68) DA(O19):DT(P67) DA(O20):DT(P66) DA(O21):DT(P65) DT(O22):DA(P64) DC(O23):DG(P63) DC(O24):DG(P62) DA(O25):DT(P61) DT(O26):DA(P60) DT(O27):DA(P59) DG(O28):DC(P58) DA(O29):DT(P57) DC(O30):DG(P56) DA(O31):DT(P55) DA(O32):DT(P54) DA(O33):DT(P53) DA(O34):DT(P52) DG(O35):DC(P51) DA(O36):DT(P50) DA(O37):DT(P49) DG(O38):DC(P48) DG(O39):DC(P47) DC(O40):DG(P46) DT(O41):DA(P45) DA(O42):DT(P44) DA(O43):DT(P43) DA(O44):DT(P42) DA(O45):DT(P41) DG(O46):DC(P40) DG(O47):DC(P39) DG(O48):DC(P38) DC(O49):DG(P37) chainI chainJ chainL (349) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 (352) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (353) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 (357) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (371) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (500) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) GLU585 0 0 0 0 0 0 0 0 0 0 1 9 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) ARG586 0 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (504) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (505) GLN589 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 16) ARG265 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhissiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/sqlkllvtrgkeqgyltyaevndhldqiediiqmindmgiqvmeedaaeaaaqvlssvttdpvrmymremgtvelltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdidpelarekfaelraqyvvtrdtikhataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlrlvisiakkytnrglqfldliqegniglmkavdkfeyrrgykfstyatWwiRQaitRsiadqartiripvHmietinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtRERiRQieakalrklrhpsrsevlrsfldd/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >6psu_M:C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=ESCHERICHIA COLI RNA POLYMERASE PROMOTER UNWINDING INTERMEDIATE (TRPI2) WITH TRAR AND RPST P2 PROMOTER organism=ESCHERICHIA COLI DNA sequence DG(P37):DC(O49) DC(P38):DG(O48) DC(P39):DG(O47) DC(P40):DG(O46) DT(P41):DA(O45) DT(P42):DA(O44) DT(P43):DA(O43) DT(P44):DA(O42) DA(P45):DT(O41) DG(P46):DC(O40) DC(P47):DG(O39) DC(P48):DG(O38) DT(P49):DA(O37) DT(P50):DA(O36) DC(P51):DG(O35) DT(P52):DA(O34) DT(P53):DA(O33) DT(P54):DA(O32) DT(P55):DA(O31) DG(P56):DC(O30) DT(P57):DA(O29) DC(P58):DG(O28) DA(P59):DT(O27) DA(P60):DT(O26) DT(P61):DA(O25) DG(P62):DC(O24) DG(P63):DC(O23) DA(P64):DT(O22) DT(P65):DA(O21) DT(P66):DA(O20) DT(P67):DA(O19) DG(P68):DC(O18) DT(P69):DA(O17) DG(P70):DC(O16) chainM ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 prot.sequence dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >6psv_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI RNA POLYMERASE PROMOTER UNWINDING INTERMEDIATE (TPRERPO) WITH TRAR AND RPST P2 PROMOTER organism=ESCHERICHIA COLI DNA sequence DT(P11):DT(O70) DG(P12):DT(O69) DG(P13):DA(O68) DA(P14):DA(O67) DC(P15):DG(O66) DA(P16):DT(O65) DA(P17):DT(O64) DT(P18):DT(O63) DT(P19):DT(O57) DC(P20):DC(O56) DA(P21):DC(O55) DA(P22):DT(O54) DA(P23):DT(O53) DT(P34):DA(O52) DA(P35):DT(O51) DT(P36):DA(O50) DG(P37):DC(O49) DC(P38):DG(O48) DC(P39):DG(O47) DC(P40):DG(O46) DT(P41):DA(O45) DT(P42):DA(O44) DT(P43):DA(O43) DT(P44):DA(O42) DA(P45):DT(O41) DG(P46):DC(O40) DC(P47):DG(O39) DC(P48):DG(O38) DT(P49):DA(O37) DT(P50):DA(O36) DC(P51):DG(O35) DT(P52):DA(O34) DT(P53):DA(O33) DT(P54):DA(O32) DT(P55):DA(O31) DG(P56):DC(O30) DT(P57):DA(O29) DC(P58):DG(O28) DA(P59):DT(O27) DA(P60):DT(O26) DT(P61):DA(O25) DG(P62):DC(O24) DG(P63):DC(O23) DA(P64):DT(O22) DT(P65):DA(O21) DT(P66):DA(O20) DT(P67):DA(O19) DG(P68):DC(O18) DT(P69):DA(O17) DG(P70):DC(O16) chainI (468) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 18 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveravkerlslgdldtlmpqdminakPisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6psv_IJLM:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI RNA POLYMERASE PROMOTER UNWINDING INTERMEDIATE (TPRERPO) WITH TRAR AND RPST P2 PROMOTER organism=ESCHERICHIA COLI DNA sequence DT(P11):DT(O70) DG(P12):DT(O69) DG(P13):DA(O68) DA(P14):DA(O67) DC(P15):DG(O66) DA(P16):DT(O65) DA(P17):DT(O64) DT(P18):DT(O63) DT(P19):DT(O57) DC(P20):DC(O56) DA(P21):DC(O55) DA(P22):DT(O54) DA(P23):DT(O53) DT(P34):DA(O52) DA(P35):DT(O51) DT(P36):DA(O50) DG(P37):DC(O49) DC(P38):DG(O48) DC(P39):DG(O47) DC(P40):DG(O46) DT(P41):DA(O45) DT(P42):DA(O44) DT(P43):DA(O43) DT(P44):DA(O42) DA(P45):DT(O41) DG(P46):DC(O40) DC(P47):DG(O39) DC(P48):DG(O38) DT(P49):DA(O37) DT(P50):DA(O36) DC(P51):DG(O35) DT(P52):DA(O34) DT(P53):DA(O33) DT(P54):DA(O32) DT(P55):DA(O31) DG(P56):DC(O30) DT(P57):DA(O29) DC(P58):DG(O28) DA(P59):DT(O27) DA(P60):DT(O26) DT(P61):DA(O25) DG(P62):DC(O24) DG(P63):DC(O23) DA(P64):DT(O22) DT(P65):DA(O21) DT(P66):DA(O20) DT(P67):DA(O19) DG(P68):DC(O18) DT(P69):DA(O17) DG(P70):DC(O16) chainI (468) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 18 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ chainL ( 8) VAL98 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG99 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) MET102 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) MET105 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU111 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ASN383 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ARG385 0 0 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) LEU386 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) LYS426 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) SER428 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) THR429 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) THR432 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (435) GLU574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (445) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 14 4 0 0 0 0 0 0 0 0 0 0 (447) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 (449) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 chainM ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveravkerlslgdldtlmpqdminakPisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearaLmmstnnilspangepiivpsqdvvlgLyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteYekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhissiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/igrttdpVRmyMreMgtvelLtregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdidpelarekfaelraqyvvtrdtikhataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNRglqfldliqegniglmkavdkFEyrRgYKfSTYaTWwiRQaitRsiadqartiripVHmiEtinklnrisRqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLEevgkqfdvTRERiRQieakalrklrhpsrsevlrsfldd/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >6psw_IJLM:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI RNA POLYMERASE PROMOTER UNWINDING INTERMEDIATE (TRPO) WITH TRAR AND RPST P2 PROMOTER organism=ESCHERICHIA COLI DNA sequence DC(O16):DG(P70) DA(O17):DT(P69) DC(O18):DG(P68) DA(O19):DT(P67) DA(O20):DT(P66) DA(O21):DT(P65) DT(O22):DA(P64) DC(O23):DG(P63) DC(O24):DG(P62) DA(O25):DT(P61) DT(O26):DA(P60) DT(O27):DA(P59) DG(O28):DC(P58) DA(O29):DT(P57) DC(O30):DG(P56) DA(O31):DT(P55) DA(O32):DT(P54) DA(O33):DT(P53) DA(O34):DT(P52) DG(O35):DC(P51) DA(O36):DT(P50) DA(O37):DT(P49) DG(O38):DC(P48) DG(O39):DC(P47) DC(O40):DG(P46) DT(O41):DA(P45) DA(O42):DT(P44) DA(O43):DT(P43) DA(O44):DT(P42) DA(O45):DT(P41) DG(O46):DC(P40) DG(O47):DC(P39) DG(O48):DC(P38) DC(O49):DG(P37) DA(O50):DT(P36) DT(O51):DA(P35) DA(O52):DT(P34) DT(O53):DA(P33) DT(O54):DA(P32) DC(O55):DG(P31) DC(O56):DG(P30) DT(O57):DA(P29) DC(O58):DG(P28) DG(O59):DC(P27) DG(O60):DC(P26) DC(O61):DG(P25) DC(O62):DG(P24) DT(O63):DA(P23) DT(O64):DA(P22) DT(O65):DA(P21) DG(O66):DC(P20) DA(O67):DT(P19) DA(O68):DT(P18) DT(O69):DA(P17) DT(O70):DA(P16) DG(O71):DC(P15) DT(O72):DA(P14) DC(O73):DG(P13) DC(O74):DG(P12) DA(O75):DT(P11) DT(O76):DA(P10) DA(O77):DT(P9) chainI (138) ASN139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (496) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) LYS503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (566) PRO567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1263) GLN1264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (328) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (375) GLU515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) SER517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) THR583 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) GLU585 0 0 0 0 0 0 0 0 0 0 0 5 11 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG586 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) GLN589 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 16) ARG265 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfviNgtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgSWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveravkerlslgdldtlmpqdminakPisaavKEffgSsqlsqFmdqnnplseithkrrisalgpggLtreRagfevrdvhpthygrvcpietpegPniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaQfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnKrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhissiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/eigrttdpVrmyMreMgtveLLtregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvddpelarekfaelraqyvvtrdtihataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNrglqfldliqegniglmkavdkFEyrRgYkfSTYaTWwirQaitrsiadqartiripvhmietinklnRisRqmlqemgreptpeelaermlmpedkirkvlkiakepIsmetpigddEdShlgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvTRERirQieakalrklrhpsrsevlrsfldd/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >6psw_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI RNA POLYMERASE PROMOTER UNWINDING INTERMEDIATE (TRPO) WITH TRAR AND RPST P2 PROMOTER organism=? DNA sequence DC(O16):DG(P70) DA(O17):DT(P69) DC(O18):DG(P68) DA(O19):DT(P67) DA(O20):DT(P66) DA(O21):DT(P65) DT(O22):DA(P64) DC(O23):DG(P63) DC(O24):DG(P62) DA(O25):DT(P61) DT(O26):DA(P60) DT(O27):DA(P59) DG(O28):DC(P58) DA(O29):DT(P57) DC(O30):DG(P56) DA(O31):DT(P55) DA(O32):DT(P54) DA(O33):DT(P53) DA(O34):DT(P52) DG(O35):DC(P51) DA(O36):DT(P50) DA(O37):DT(P49) DG(O38):DC(P48) DG(O39):DC(P47) DC(O40):DG(P46) DT(O41):DA(P45) DA(O42):DT(P44) DA(O43):DT(P43) DA(O44):DT(P42) DA(O45):DT(P41) DG(O46):DC(P40) DG(O47):DC(P39) DG(O48):DC(P38) DC(O49):DG(P37) DA(O50):DT(P36) DT(O51):DA(P35) DA(O52):DT(P34) DT(O53):DA(P33) DT(O54):DA(P32) DC(O55):DG(P31) DC(O56):DG(P30) DT(O57):DA(P29) DC(O58):DG(P28) DG(O59):DC(P27) DG(O60):DC(P26) DC(O61):DG(P25) DC(O62):DG(P24) DT(O63):DA(P23) DT(O64):DA(P22) DT(O65):DA(P21) DG(O66):DC(P20) DA(O67):DT(P19) DA(O68):DT(P18) DT(O69):DA(P17) DT(O70):DA(P16) DG(O71):DC(P15) DT(O72):DA(P14) DC(O73):DG(P13) DC(O74):DG(P12) DA(O75):DT(P11) DT(O76):DA(P10) DA(O77):DT(P9) chainJ (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnKrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhissiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >6put_ACD:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF HIV CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME BOUND WITH CALCIUM organism=? DNA sequence DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 chainC chainD prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvykllwkgegavviqikvvp/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkq/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >6puw_AC:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF HIV CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME BOUND WITH MAGNESIUM AND BICTEGRAVIR (BIC) organism=? DNA sequence DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 chainC prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvgpakllwkgegavviqikvvakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqma >6puw_D:DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF HIV CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME BOUND WITH MAGNESIUM AND BICTEGRAVIR (BIC) organism=? DNA sequence DA(E15) DC(E16) DT(E17) DG(E18) DC(E19) DT(E20) DA(E21) DG(E22) DA(E23) DG(E24) DA(E25) DT(E26) DT(E27) DT(E28) DT(E29) DC(E30) DC(E31) DC(E32) DG(E33) chainD ( 21) LEU242 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) TRP243 14 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU246 0 1 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ALA248 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) VAL250 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nfrvyyrdsrdpvwkgpaklLWkgEgAvViqdnsdikvvprrkakii >6puy_A:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF HIV CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME BOUND WITH MAGNESIUM AND INSTI XZ426 (COMPOUND 4D) organism=? DNA sequence DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii >6puy_ABC:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF HIV CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME BOUND WITH MAGNESIUM AND INSTI XZ426 (COMPOUND 4D) organism=? DNA sequence DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 chainB (234) ARG262 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgviesmnkelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrwkgpakllwkgegavviqdnsdikvvpRrkakiird/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiirdygkqmag >6puz_A:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF HIV CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME BOUND WITH MAGNESIUM AND INSTI XZ446 (COMPOUND 4F) organism=? DNA sequence DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakiir >6puz_ABC:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF HIV CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME BOUND WITH MAGNESIUM AND INSTI XZ446 (COMPOUND 4F) organism=? DNA sequence DG(E18):DC(F20) DC(E19):DG(F19) DT(E20):DA(F18) DA(E21):DT(F17) DG(E22):DC(F16) DA(E23):DT(F15) DG(E24):DC(F14) DA(E25):DT(F13) DT(E26):DA(F12) DT(E27):DA(F11) DT(E28):DA(F10) DT(E29):DA(F9) DC(E30):DG(F8) DC(E31):DG(F7) DC(E32):DG(F6) DG(E33):DC(F5) chainA ( 51) HIS51 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (233) ARG263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainC prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakiir/dgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefviesmnkelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrwkgpakllwkgegavviqdnsdikvvprRkakiird/lqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiirdygkqmag >6pw2_ABCD:Viral_DNA-binding_domain; title=STRUCTURAL BASIS FOR COOPERATIVE BINDING OF EBNA1 TO THE EPSTEIN-BARR VIRUS DYAD SYMMETRY MINIMAL ORIGIN OF REPLICATION organism=Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) DNA sequence DC(E6):DA(F55) DA(E8):DT(F54) DA(E9):DT(F53) DT(E10):DA(F52) DT(E11):DA(F51) DC(E12):DG(F50) DG(E13):DC(F49) DA(E14):DT(F48) DT(E15):DA(F47) DA(E16):DT(F46) DG(E17):DC(F45) DC(E18):DG(F44) DA(E19):DT(F43) DT(E20):DA(F42) DA(E21):DT(F41) DT(E22):DA(F40) DG(E23):DC(F39) DC(E24):DG(F38) DT(E25):DA(F37) DT(E26):DA(F36) DC(E27):DG(F35) DC(E28):DG(F34) DC(E29):DG(F33) DG(E30):DC(F32) DT(E31):DA(F31) DT(E32):DA(F30) DG(E33):DC(F29) DG(E34):DC(F28) DG(E35):DC(F27) DT(E36):DA(F26) DA(E37):DT(F25) DA(E38):DT(F24) DC(E39):DG(F23) DA(E40):DT(F22) DT(E41):DA(F21) DA(E42):DT(F20) DT(E43):DA(F19) DG(E44):DC(F18) DC(E45):DG(F17) DT(E46):DA(F16) DA(E47):DT(F15) DT(E48):DA(F14) DT(E49):DA(F13) DG(E50):DC(F12) DA(E51):DT(F11) DA(E52):DT(F10) DT(E53):DA(F9) DT(E54):DA(F8) DG(E56):DT(F7) DG(E57):DC(F6) chainA ( 1) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 1) LYS461 0 0 0 0 0 0 0 4 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TRP464 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) PHE465 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS477 0 0 0 0 0 2 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR515 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) TYR518 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN519 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 4) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 6 0 0 0 0 0 0 0 0 ( 4) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 ( 9) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 ( 58) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 prot.sequence KggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlp/KggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlp/kggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlp/KggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYnlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlp >6pw2_C:Viral_DNA-binding_domain; title=STRUCTURAL BASIS FOR COOPERATIVE BINDING OF EBNA1 TO THE EPSTEIN-BARR VIRUS DYAD SYMMETRY MINIMAL ORIGIN OF REPLICATION organism=Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) DNA sequence DC(E6):DA(F55) DA(E8):DT(F54) DA(E9):DT(F53) DT(E10):DA(F52) DT(E11):DA(F51) DC(E12):DG(F50) DG(E13):DC(F49) DA(E14):DT(F48) DT(E15):DA(F47) DA(E16):DT(F46) DG(E17):DC(F45) DC(E18):DG(F44) DA(E19):DT(F43) DT(E20):DA(F42) DA(E21):DT(F41) DT(E22):DA(F40) DG(E23):DC(F39) DC(E24):DG(F38) DT(E25):DA(F37) DT(E26):DA(F36) DC(E27):DG(F35) DC(E28):DG(F34) DC(E29):DG(F33) DG(E30):DC(F32) DT(E31):DA(F31) DT(E32):DA(F30) DG(E33):DC(F29) DG(E34):DC(F28) DG(E35):DC(F27) DT(E36):DA(F26) DA(E37):DT(F25) DA(E38):DT(F24) DC(E39):DG(F23) DA(E40):DT(F22) DT(E41):DA(F21) DA(E42):DT(F20) DT(E43):DA(F19) DG(E44):DC(F18) DC(E45):DG(F17) DT(E46):DA(F16) DA(E47):DT(F15) DT(E48):DA(F14) DT(E49):DA(F13) DG(E50):DC(F12) DA(E51):DT(F11) DA(E52):DT(F10) DT(E53):DA(F9) DT(E54):DA(F8) DG(E56):DT(F7) DG(E57):DC(F6) chainC ( 4) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlp >6pw2_IKL:Viral_DNA-binding_domain; title=STRUCTURAL BASIS FOR COOPERATIVE BINDING OF EBNA1 TO THE EPSTEIN-BARR VIRUS DYAD SYMMETRY MINIMAL ORIGIN OF REPLICATION organism=Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) DNA sequence DA(H8):DT(G54) DA(H9):DT(G53) DT(H10):DA(G52) DT(H11):DA(G51) DC(H12):DG(G50) DA(H13):DT(G49) DA(H14):DT(G48) DT(H15):DA(G47) DA(H16):DT(G46) DG(H17):DC(G45) DC(H18):DG(G44) DA(H19):DT(G43) DT(H20):DA(G42) DA(H21):DT(G41) DT(H22):DA(G40) DG(H23):DC(G39) DT(H24):DA(G38) DT(H25):DA(G37) DA(H26):DT(G36) DC(H27):DG(G35) DC(H28):DG(G34) DC(H29):DG(G33) DA(H30):DT(G32) DA(H31):DT(G31) DC(H32):DG(G30) DG(H33):DC(G29) DG(H34):DC(G28) DG(H35):DC(G27) DA(H36):DT(G26) DA(H37):DT(G25) DG(H38):DC(G24) DC(H39):DG(G23) DA(H40):DT(G22) DT(H41):DA(G21) DA(H42):DT(G20) DT(H43):DA(G19) DG(H44):DC(G18) DC(H45):DG(G17) DT(H46):DA(G16) DA(H47):DT(G15) DT(H48):DA(G14) DC(H49):DG(G13) DG(H50):DC(G12) DA(H51):DT(G11) DT(H53):DA(G9) chainI ( 1) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ASN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 1) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 1) LYS461 0 0 0 0 0 0 5 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TRP464 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) PHE465 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG469 0 0 0 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS477 0 0 0 0 3 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR515 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) TYR518 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN519 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KggWFgkhRgqggsNpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlp/KggWFgkhrgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlp/KggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlp >6pwe_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF NUCLEOSOME CORE PARTICLE organism=DROSOPHILA MELANOGASTER DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J5):DG(I-4) DC(J6):DG(I-5) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J37):DG(I-36) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 28) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 3) ARG16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrPgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/dnIqgItkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ksrsnraglqfpvgrihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllp/rkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/dnIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ksRsnraglqfpvgrihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllp/rkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >6pwe_G:Histone-fold; title=CRYO-EM STRUCTURE OF NUCLEOSOME CORE PARTICLE organism=? DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-36):DC(J37) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-5):DC(J6) DG(I-4):DC(J5) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DA(I72):DT(J-72) DT(I73):DA(J-73) chainG ( 3) ARG16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ksRsnraglqfpvgrihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllp >6pwe_H:Histone-fold; title=CRYO-EM STRUCTURE OF NUCLEOSOME CORE PARTICLE organism=? DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-36):DC(J37) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-5):DC(J6) DG(I-4):DC(J5) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DA(I72):DT(J-72) DT(I73):DA(J-73) chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >6pwf_C:Histone-fold; title=CRYO-EM STRUCTURE OF THE ATPASE DOMAIN OF CHROMATIN REMODELING FACTOR ISWI BOUND TO THE NUCLEOSOME organism=? DNA sequence DT(J-72):DA(I72) DC(J-71):DG(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainC ( 28) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ksrsnraglqfpvgrihrllrkgnyaeRvgagapvylaavmeylaaevlelagnaardnkktRiiprhlqlairndeelnkllsgvtiaqggvlpniqavllpk >6pwv_G:Histone-fold; title=CRYO-EM STRUCTURE OF MLL1 CORE COMPLEX BOUND TO THE NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DC(O3):DG(P145) DG(O4):DC(P144) DA(O5):DT(P143) DG(O6):DC(P142) DA(O7):DT(P141) DA(O8):DT(P140) DT(O9):DA(P139) DC(O10):DG(P138) DC(O11):DG(P137) DC(O12):DG(P136) DG(O13):DC(P135) DG(O14):DC(P134) DT(O15):DA(P133) DG(O16):DC(P132) DC(O17):DG(P131) DC(O18):DG(P130) DG(O19):DC(P129) DA(O20):DT(P128) DG(O21):DC(P127) DG(O22):DC(P126) DC(O23):DG(P125) DC(O24):DG(P124) DG(O25):DC(P123) DC(O26):DG(P122) DT(O27):DA(P121) DC(O28):DG(P120) DA(O29):DT(P119) DA(O30):DT(P118) DT(O31):DA(P117) DT(O32):DA(P116) DG(O33):DC(P115) DG(O34):DC(P114) DT(O35):DA(P113) DC(O36):DG(P112) DG(O37):DC(P111) DT(O38):DA(P110) DA(O39):DT(P109) DG(O40):DC(P108) DA(O41):DT(P107) DC(O42):DG(P106) DA(O43):DT(P105) DG(O44):DC(P104) DC(O45):DG(P103) DT(O46):DA(P102) DC(O47):DG(P101) DT(O48):DA(P100) DA(O49):DT(P99) DG(O50):DC(P98) DC(O51):DG(P97) DA(O52):DT(P96) DC(O53):DG(P95) DC(O54):DG(P94) DG(O55):DC(P93) DC(O56):DG(P92) DT(O57):DA(P91) DT(O58):DA(P90) DA(O59):DT(P89) DA(O60):DT(P88) DA(O61):DT(P87) DC(O62):DG(P86) DG(O63):DC(P85) DC(O64):DG(P84) DA(O65):DT(P83) DC(O66):DG(P82) DG(O67):DC(P81) DT(O68):DA(P80) DA(O69):DT(P79) DC(O70):DG(P78) DG(O71):DC(P77) DC(O72):DG(P76) DG(O73):DC(P75) DC(O74):DG(P74) DT(O75):DA(P73) DG(O76):DC(P72) DT(O77):DA(P71) DC(O78):DG(P70) DC(O79):DG(P69) DC(O80):DG(P68) DC(O81):DG(P67) DC(O82):DG(P66) DG(O83):DC(P65) DC(O84):DG(P64) DG(O85):DC(P63) DT(O86):DA(P62) DT(O87):DA(P61) DT(O88):DA(P60) DT(O89):DA(P59) DA(O90):DT(P58) DA(O91):DT(P57) DC(O92):DG(P56) DC(O93):DG(P55) DG(O94):DC(P54) DC(O95):DG(P53) DC(O96):DG(P52) DA(O98):DT(P51) DG(O99):DC(P49) DG(O100):DC(P48) DG(O101):DC(P47) DG(O102):DC(P46) DA(O103):DT(P45) DT(O104):DA(P44) DT(O105):DA(P43) DA(O106):DT(P42) DC(O107):DG(P41) DT(O108):DA(P40) DC(O109):DG(P39) DC(O110):DG(P38) DC(O111):DG(P37) DT(O112):DA(P36) DA(O113):DT(P35) DG(O114):DC(P34) DT(O115):DA(P33) DC(O116):DG(P32) DT(O117):DA(P31) DC(O118):DG(P30) DC(O119):DG(P29) DA(O120):DT(P28) DG(O121):DC(P27) DG(O122):DC(P26) DC(O123):DG(P25) DA(O124):DT(P24) DC(O125):DG(P23) DG(O126):DC(P22) DT(O127):DA(P21) DG(O128):DC(P20) DT(O129):DA(P19) DC(O130):DG(P18) DA(O131):DT(P17) DG(O132):DC(P16) DA(O133):DT(P15) DT(O134):DA(P14) DA(O135):DT(P13) DT(O136):DA(P12) DA(O137):DT(P11) DT(O138):DA(P10) DA(O139):DT(P9) DC(O140):DG(P8) DA(O141):DT(P7) DT(O142):DA(P6) DC(O143):DG(P5) DC(O144):DG(P4) DG(O145):DC(P3) DA(O146):DT(P2) DT(O147):DA(P1) chainG ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG42 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYRpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >6pww_K:Histone-fold; title=CRYO-EM STRUCTURE OF MLL1 IN COMPLEX WITH RBBP5 AND WDR5 BOUND TO THE NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DC(O3):DG(P145) DG(O4):DC(P144) DA(O5):DT(P143) DG(O6):DC(P142) DA(O7):DT(P141) DA(O8):DT(P140) DT(O9):DA(P139) DC(O10):DG(P138) DC(O11):DG(P137) DC(O12):DG(P136) DG(O13):DC(P135) DG(O14):DC(P134) DT(O15):DA(P133) DG(O16):DC(P132) DC(O17):DG(P131) DC(O18):DG(P130) DG(O19):DC(P129) DA(O20):DT(P128) DG(O21):DC(P127) DG(O22):DC(P126) DC(O23):DG(P125) DC(O24):DG(P124) DG(O25):DC(P123) DC(O26):DG(P122) DT(O27):DA(P121) DC(O28):DG(P120) DA(O29):DT(P119) DA(O30):DT(P118) DT(O31):DA(P117) DT(O32):DA(P116) DG(O33):DC(P115) DG(O34):DC(P114) DT(O35):DA(P113) DC(O36):DG(P112) DG(O37):DC(P111) DT(O38):DA(P110) DA(O39):DT(P109) DG(O40):DC(P108) DA(O41):DT(P107) DC(O42):DG(P106) DA(O43):DT(P105) DG(O44):DC(P104) DC(O45):DG(P103) DT(O46):DA(P102) DC(O47):DG(P101) DT(O48):DA(P100) DA(O49):DT(P99) DG(O50):DC(P98) DC(O51):DG(P97) DA(O52):DT(P96) DC(O53):DG(P95) DC(O54):DG(P94) DG(O55):DC(P93) DC(O56):DG(P92) DT(O57):DA(P91) DT(O58):DA(P90) DA(O59):DT(P89) DA(O60):DT(P88) DA(O61):DT(P87) DC(O62):DG(P86) DG(O63):DC(P85) DC(O64):DG(P84) DA(O65):DT(P83) DC(O66):DG(P82) DG(O67):DC(P81) DT(O68):DA(P80) DA(O69):DT(P79) DC(O70):DG(P78) DG(O71):DC(P77) DC(O72):DG(P76) DG(O73):DC(P75) DC(O74):DG(P74) DT(O75):DA(P73) DG(O76):DC(P72) DT(O77):DA(P71) DC(O78):DG(P70) DC(O79):DG(P69) DC(O80):DG(P68) DC(O81):DG(P67) DC(O82):DG(P66) DG(O83):DC(P65) DC(O84):DG(P64) DG(O85):DC(P63) DT(O86):DA(P62) DT(O87):DA(P61) DT(O88):DA(P60) DT(O89):DA(P59) DA(O90):DT(P58) DA(O91):DT(P57) DC(O92):DG(P56) DC(O93):DG(P55) DG(O94):DC(P54) DC(O95):DG(P53) DC(O96):DG(P52) DA(O97):DT(P51) DA(O98):DT(P50) DG(O99):DC(P49) DG(O100):DC(P48) DG(O101):DC(P47) DG(O102):DC(P46) DA(O103):DT(P45) DT(O104):DA(P44) DT(O105):DA(P43) DA(O106):DT(P42) DC(O107):DG(P41) DT(O108):DA(P40) DC(O109):DG(P39) DC(O110):DG(P38) DC(O111):DG(P37) DT(O112):DA(P36) DA(O113):DT(P35) DG(O114):DC(P34) DT(O115):DA(P33) DC(O116):DG(P32) DT(O117):DA(P31) DC(O118):DG(P30) DC(O119):DG(P29) DA(O120):DT(P28) DG(O121):DC(P27) DG(O122):DC(P26) DC(O123):DG(P25) DA(O124):DT(P24) DC(O125):DG(P23) DG(O126):DC(P22) DT(O127):DA(P21) DG(O128):DC(P20) DT(O129):DA(P19) DC(O130):DG(P18) DA(O131):DT(P17) DG(O132):DC(P16) DA(O133):DT(P15) DT(O134):DA(P14) DA(O135):DT(P13) DT(O136):DA(P12) DA(O137):DT(P11) DT(O138):DA(P10) DA(O139):DT(P9) DC(O140):DG(P8) DA(O141):DT(P7) DT(O142):DA(P6) DC(O143):DG(P5) DC(O144):DG(P4) DG(O145):DC(P3) DA(O146):DT(P2) DT(O147):DA(P1) chainK ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 prot.sequence kphRyRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >6pwx_M:Histone-fold; title=CRYO-EM STRUCTURE OF RBBP5 BOUND TO THE NUCLEOSOME organism=? DNA sequence DC(O3):DG(P145) DG(O4):DC(P144) DA(O5):DT(P143) DG(O6):DC(P142) DA(O7):DT(P141) DA(O8):DT(P140) DT(O9):DA(P139) DC(O10):DG(P138) DC(O11):DG(P137) DC(O12):DG(P136) DG(O13):DC(P135) DG(O14):DC(P134) DT(O15):DA(P133) DG(O16):DC(P132) DC(O17):DG(P131) DC(O18):DG(P130) DG(O19):DC(P129) DA(O20):DT(P128) DG(O21):DC(P127) DG(O22):DC(P126) DC(O23):DG(P125) DC(O24):DG(P124) DG(O25):DC(P123) DC(O26):DG(P122) DT(O27):DA(P121) DC(O28):DG(P120) DA(O29):DT(P119) DA(O30):DT(P118) DT(O31):DA(P117) DT(O32):DA(P116) DG(O33):DC(P115) DG(O34):DC(P114) DT(O35):DA(P113) DC(O36):DG(P112) DG(O37):DC(P111) DT(O38):DA(P110) DA(O39):DT(P109) DG(O40):DC(P108) DA(O41):DT(P107) DC(O42):DG(P106) DA(O43):DT(P105) DG(O44):DC(P104) DC(O45):DG(P103) DT(O46):DA(P102) DC(O47):DG(P101) DT(O48):DA(P100) DA(O49):DT(P99) DG(O50):DC(P98) DC(O51):DG(P97) DA(O52):DT(P96) DC(O53):DG(P95) DC(O54):DG(P94) DG(O55):DC(P93) DC(O56):DG(P92) DT(O57):DA(P91) DT(O58):DA(P90) DA(O59):DT(P89) DA(O60):DT(P88) DA(O61):DT(P87) DC(O62):DG(P86) DG(O63):DC(P85) DC(O64):DG(P84) DA(O65):DT(P83) DC(O66):DG(P82) DG(O67):DC(P81) DT(O68):DA(P80) DA(O69):DT(P79) DC(O70):DG(P78) DG(O71):DC(P77) DC(O72):DG(P76) DG(O73):DC(P75) DC(O74):DG(P74) DT(O75):DA(P73) DG(O76):DC(P72) DT(O77):DA(P71) DC(O78):DG(P70) DC(O79):DG(P69) DC(O80):DG(P68) DC(O81):DG(P67) DC(O82):DG(P66) DG(O83):DC(P65) DC(O84):DG(P64) DG(O85):DC(P63) DT(O86):DA(P62) DT(O87):DA(P61) DT(O88):DA(P60) DT(O89):DA(P59) DA(O90):DT(P58) DA(O91):DT(P57) DC(O92):DG(P56) DC(O93):DG(P55) DG(O94):DC(P54) DC(O95):DG(P53) DC(O96):DG(P52) DA(O98):DT(P51) DG(O99):DC(P49) DG(O100):DC(P48) DG(O101):DC(P47) DG(O102):DC(P46) DA(O103):DT(P45) DT(O104):DA(P44) DT(O105):DA(P43) DA(O106):DT(P42) DC(O107):DG(P41) DT(O108):DA(P40) DC(O109):DG(P39) DC(O110):DG(P38) DC(O111):DG(P37) DT(O112):DA(P36) DA(O113):DT(P35) DG(O114):DC(P34) DT(O115):DA(P33) DC(O116):DG(P32) DT(O117):DA(P31) DC(O118):DG(P30) DC(O119):DG(P29) DA(O120):DT(P28) DG(O121):DC(P27) DG(O122):DC(P26) DC(O123):DG(P25) DA(O124):DT(P24) DC(O125):DG(P23) DG(O126):DC(P22) DT(O127):DA(P21) DG(O128):DC(P20) DT(O129):DA(P19) DC(O130):DG(P18) DA(O131):DT(P17) DG(O132):DC(P16) DA(O133):DT(P15) DT(O134):DA(P14) DA(O135):DT(P13) DT(O136):DA(P12) DA(O137):DT(P11) DT(O138):DA(P10) DA(O139):DT(P9) DC(O140):DG(P8) DA(O141):DT(P7) DT(O142):DA(P6) DC(O143):DG(P5) DC(O144):DG(P4) DG(O145):DC(P3) DA(O146):DT(P2) DT(O147):DA(P1) chainM ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >6px1_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=SET2 BOUND TO NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DT(I2):DA(J146) DG(I3):DC(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DT(I145):DA(J3) DG(I146):DC(J2) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainF chainG chainH ( 2) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/grssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/rRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/kphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/lrdNIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/grsSRaglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/rRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >6px1_C:Histone-fold; title=SET2 BOUND TO NUCLEOSOME organism=? DNA sequence DC(J2):DG(I146) DA(J3):DT(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DC(J145):DG(I3) DA(J146):DT(I2) chainC ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence grssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >6px3_G:Histone-fold; title=SET2 BOUND TO NUCLEOSOME organism=? DNA sequence DT(I2):DA(J146) DG(I3):DC(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DT(I145):DA(J3) DG(I146):DC(J2) chainG ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence grssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >6py8_C:p53-like_transcription_factors;DNA-binding_protein_LAG-1_CSL;E_set_domains; title=CRYSTAL STRUCTURE OF THE RBPJ-NOTCH1-NRARP TERNARY COMPLEX BOUND TO DNA organism=HOMO SAPIENS DNA sequence DG(X3):DC(Y116) DA(X4):DT(Y115) DC(X5):DG(Y114) DT(X6):DA(Y113) DG(X7):DC(Y112) DT(X8):DA(Y111) DG(X9):DC(Y110) DG(X10):DC(Y109) DG(X11):DC(Y108) DA(X12):DT(Y107) DA(X13):DT(Y106) DA(X14):DT(Y105) DG(X15):DC(Y104) DA(X16):DT(Y103) chainC ( 36) TYR46 0 0 0 0 0 0 0 0 0 10 0 0 0 0 ( 39) GLU49 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 41) ARG51 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (141) SER151 0 0 0 0 0 0 0 0 0 1 4 0 0 0 (142) LYS152 0 0 0 0 0 0 0 0 10 14 4 0 0 0 (171) SER181 0 0 0 0 4 4 0 0 0 0 0 0 0 0 (172) GLN182 0 0 2 5 0 0 0 0 0 0 0 0 0 0 prot.sequence rpppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskkkqslknadlciasgtkvalfnrlrSQtvstrylhveggnfhassqqwgaffihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkepnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlngggdvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgiiystsltftytpepgprph >6pz3_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POLYMERASE ETA-CATALYZED INSERTION OF CORRECT G OPPOSITE TEMPLATE CYTARABINE (ARAC) RESIDUE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DC(T6):DG(P7) DA(T7):DT(P6) DG(T8):DC(P5) DT(T9):DA(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (379) ARG382 0 0 0 0 0 3 6 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftviknmntsgiqtewsppltmlflcatkfsas >6q02_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=POLYMERASE ETA-CATALYZED INSERTION OF THE MISMATCHED A OPPOSITE TEMPLATE CYTARABINE (ARAC) RESIDUE organism=Homo sapiens DNA sequence DA(T5):DT(P8) DC(T6):DG(P7) DA(T7):DT(P6) DG(T8):DC(P5) DT(T9):DA(P4) DG(T10):DC(P3) DC(T11):DG(P2) DG(T12):DT(P1) chainA (380) ARG382 0 0 0 0 0 3 6 0 prot.sequence phmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpttvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftviknmntsgiqtewsppltmlflcatkfsas >6q0c_A:DNA-glycosylase;Nudix; title=MUTY ADENINE GLYCOSYLASE BOUND TO DNA CONTAINING A TRANSITION STATE ANALOG (1N) PAIRED WITH UNDAMAGED DG organism=Geobacillus stearothermophilus DNA sequence DA(B2):DT(C22) DG(B3):DC(C21) DA(B4):DT(C20) DC(B5):DG(C19) DG(B6):NR1(C18) DT(B7):DA(C17) DG(B8):DC(C16) DG(B9):DC(C15) DA(B10):DT(C14) DC(B11):DG(C13) chainA ( 43) GLN48 0 0 0 46 4 8 0 0 0 0 ( 44) THR49 0 0 0 0 5 0 0 0 0 0 ( 45) ARG50 0 0 0 0 0 1 1 0 0 0 ( 83) TYR88 0 0 0 74 41 0 0 0 0 0 ( 86) ARG91 0 0 0 0 1 0 0 0 0 0 (297) SER308 0 0 0 12 4 0 0 0 0 0 (298) HIS309 0 0 0 14 0 0 0 0 0 0 prot.sequence erfparefqrdlldwfarerrdlpwrkdrdpykvwvsevmlQQTRvetvipyfeqfidrfptlealadadedevlkaweglgYysRvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavdgnvmrvlsrlflvtddiakpstrkrfeqivreimayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqvplavavladdegrvlirkrdstgllanlwefpscetddgkekleqmvglqveltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >6q1v_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=HUMAN DNA LIGASE 1 (E592R) BOUND TO AN ADENYLATED, HYDROXYL TERMINATED DNA NICK organism=Homo sapiens DNA sequence DG(D9):DC(C7) DT(D10):DA(C6) DC(D11):DG(C5) DC(D12):DG(C4) DG(D13):DC(C3) DA(D14):DT(C2) DC(D15):DG(C1) DG(D16):DC(B13) DA(D17):DT(B12) DC(D18):DG(B11) DG(D19):DC(B10) DC(D20):DG(B9) DA(D21):DT(B8) DT(D22):DA(B7) DC(D23):DG(B6) DA(D24):DT(B5) DG(D25):DC(B4) DC(D26):DG(B3) chainA (287) HIS546 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (376) PHE635 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (384) ARG643 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 (511) LYS770 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) THR798 0 0 0 0 3 7 1 0 0 0 0 0 0 0 0 0 0 0 (613) PHE872 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 prot.sequence sndpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsarlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglelgvgdgvllkavaqatgrqlesvraeaaekgdvglvaensrstqrlmlppppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlrlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlaHptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrnqrdntgkypdiisripkiklpsvtsfildteavawdrekkqiqpFqvlttrkRkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdyldgvgdtldlvvigaylgrgKRagryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislRFprfirvredkqpeqattsaqvaclyrkqs >6q2b_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PUTATIVE MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM LISTERIA MONOCYTOGENES COMPLEXED WITH 26MER DNA organism=Listeria monocytogenes DNA sequence DC(C1):DG(D26) DC(C2):DG(D25) DT(C3):DA(D24) DA(C4):DT(D23) DT(C5):DA(D22) DT(C6):DA(D21) DG(C7):DC(D20) DT(C8):DA(D19) DT(C9):DA(D18) DG(C10):DC(D17) DC(C11):DG(D16) DA(C12):DT(D15) DA(C13):DT(D14) DT(C14):DA(D13) DT(C15):DA(D12) DG(C16):DC(D11) DC(C17):DG(D10) DA(C18):DT(D9) DA(C19):DT(D8) DC(C20):DG(D7) DA(C21):DT(D6) DA(C22):DT(D5) DT(C23):DA(D4) DA(C24):DT(D3) DG(C25):DC(D2) DG(C26):DC(D1) chainA ( 48) GLU48 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG58 0 0 0 0 0 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) THR59 0 0 0 0 0 0 0 3 5 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) THR60 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG63 0 0 0 0 0 0 0 0 14 7 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) LYS84 0 0 0 7 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 48) GLU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 58) ARG58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 4 0 0 0 0 0 ( 59) THR59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 4 3 0 0 0 0 0 0 0 ( 60) THR60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 62) SER62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 63) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 7 15 0 0 0 0 0 0 0 0 ( 84) LYS84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 7 0 0 0 prot.sequence mkdilrdigviaraldsisniefkelnlakgqfiylvricenqgiiqEklvdilkidRTTasRaiknlekngliikkqnknnkKnkllfptekgqqlypliireneysnavalkgfteaeinmltdalkkvkeniaddwlyvkkgnkrsy/mkdilrdigviaraldsisniefkelnlakgqfiylvricenqgiiqEklvdilkidRTTaSRaiknlekngliikkqnknnkKnkllfptekgqqlypliireneysnavalkgfteaeinmltdalkkvkeniaddwlyvkkgnkrsy >6q2b_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF PUTATIVE MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM LISTERIA MONOCYTOGENES COMPLEXED WITH 26MER DNA organism=Listeria monocytogenes DNA sequence DC(C1):DG(D26) DC(C2):DG(D25) DT(C3):DA(D24) DA(C4):DT(D23) DT(C5):DA(D22) DT(C6):DA(D21) DG(C7):DC(D20) DT(C8):DA(D19) DT(C9):DA(D18) DG(C10):DC(D17) DC(C11):DG(D16) DA(C12):DT(D15) DA(C13):DT(D14) DT(C14):DA(D13) DT(C15):DA(D12) DG(C16):DC(D11) DC(C17):DG(D10) DA(C18):DT(D9) DA(C19):DT(D8) DC(C20):DG(D7) DA(C21):DT(D6) DA(C22):DT(D5) DT(C23):DA(D4) DA(C24):DT(D3) DG(C25):DC(D2) DG(C26):DC(D1) chainB ( 48) GLU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 58) ARG58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 4 0 0 0 0 0 ( 59) THR59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 4 3 0 0 0 0 0 0 0 ( 60) THR60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 62) SER62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 63) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 7 15 0 0 0 0 0 0 0 0 ( 84) LYS84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 7 0 0 0 prot.sequence mkdilrdigviaraldsisniefkelnlakgqfiylvricenqgiiqEklvdilkidRTTaSRaiknlekngliikkqnknnkKnkllfptekgqqlypliireneysnavalkgfteaeinmltdalkkvkeniaddwlyvkkgnkrsy >6q4t_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KOD DNA POL IN A CLOSED TERNARY COMPLEX WITH 7-DEAZA-7-(2-(2- HYDROXYETHOXY)-N-(PROP-2-YN-1-YL)ACETAMIDE)-2-DATP organism=? DNA sequence DG(T5):DOC(P12) DT(T6):DA(P11) DG(T7):DC(P10) DG(T8):DC(P9) DC(T9):DG(P8) DC(T10):DG(P7) DG(T11):DC(P6) DT(T12):DA(P5) DG(T13):DC(P4) DG(T14):DC(P3) DT(T15):DA(P2) DC(T16):DG(P1) chainA (494) TYR494 2 0 0 0 0 0 0 0 0 0 0 0 (592) LYS592 0 5 7 0 0 0 0 0 0 0 0 0 (612) ARG612 0 0 0 7 6 0 0 0 0 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslYpsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqraikilansyYgyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklviheqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdptkhkydaeyyienqvlpaverilrafgyrkedlry >6q4u_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KLENTAQ DNA POL IN A CLOSED TERNARY COMPLEX WITH 7-DEAZA-7-(2-(2- HYDROXYETHOXY)-N-(PROP-2-YN-1-YL)ACETAMIDE)-2-DATP organism=Thermus aquaticus DNA sequence DG(B101):DC(C216) DA(B102):DT(C215) DC(B103):DG(C214) DC(B104):DG(C213) DA(B105):DT(C212) DC(B106):DG(C211) DG(B107):DC(C210) DG(B108):DC(C209) DC(B109):DG(C208) DC(B110):DG(C207) DA(B111):DT(C206) DOC(B112):DG(C205) chainA (247) LYS540 0 0 0 0 0 0 0 4 5 0 0 0 (252) TYR545 0 0 0 0 0 0 0 0 0 1 0 0 (280) ARG573 0 0 0 0 0 0 0 0 0 0 3 8 (287) ASN580 0 0 0 0 0 0 0 0 0 1 0 0 (290) ASN583 0 0 0 0 0 0 0 0 1 7 1 0 (461) GLN754 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >6q4v_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KLENTAQ DNA POLYMERASE IN COMPLEX WITH DATP organism=Thermus aquaticus DNA sequence DT(C206):DA(B111) DG(C207):DC(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (247) LYS540 0 0 5 4 0 0 0 0 0 0 0 (280) ARG573 3 0 0 0 0 0 0 0 0 0 0 (287) ASN580 0 1 0 0 0 0 0 0 0 0 0 (290) ASN583 1 7 2 0 0 0 0 0 0 0 0 prot.sequence leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsak >6q6r_F: title=RECOGNITION OF DIFFERENT BASE TETRADS BY RHAU: X-RAY CRYSTAL STRUCTURE OF G4 RECOGNITION MOTIF BOUND TO THE 3-END TETRAD OF A DNA G-QUADRUPLEX organism=HOMO SAPIENS DNA sequence DG(B15) DG(B14) DG(B13) DT(B12) DG(B11) DG(B10) DG(B9) DT(B8) DG(B7) DG(B6) DG(B5) DG(B1):DG(B5) DG(B2):DG(B14) DG(B3):DG(B15) DT(B4) chainF ( 1) HIS1 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 8) ARG8 0 0 0 0 0 0 0 0 6 0 0 0 0 5 0 ( 10) ILE10 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 ( 12) MET12 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 ( 14) TYR14 40 0 0 0 12 0 0 0 0 0 0 0 0 40 0 ( 15) ALA15 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 prot.sequence HpghlkgReIgMwYAkK >6qec_A:Homeodomain-like; title=DNA BINDING DOMAIN OF LUX ARRYTHMO IN COMPLEX WITH DNA organism=Arabidopsis thaliana DNA sequence DT(U19):DA(B46) DT(U20):DA(B45) DC(U21):DG(B44) DG(U22):DC(B43) DA(U23):DT(B42) DA(U24):DT(B41) DT(U25):DA(B40) DA(U26):DT(B39) DT(U27):DA(B38) chainA ( 11) ARG146 0 0 0 0 0 0 0 3 3 ( 50) ARG185 0 0 3 0 0 0 0 0 0 ( 51) GLU186 0 0 0 0 2 2 0 0 0 ( 55) SER190 0 0 0 0 0 1 7 4 0 ( 58) GLN193 0 0 0 0 10 11 1 0 0 ( 59) LYS194 0 0 0 0 0 0 0 4 1 prot.sequence grqgktlkrpRlvwtpqlhkrfvdvvahlgiknavpktimqlmnvegltREnvaShlQKyrlylk >6qem_L:P-loop_containing_nucleoside_triphosphate_hydrolases; title=E. COLI DNABC COMPLEX BOUND TO SSDNA organism=ESCHERICHIA COLI DNA sequence DT(M1) DT(M2) DT(M3) DT(M4) DT(M5) DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) DT(M17) DT(M18) DT(M19) DT(M20) DT(M21) DT(M22) DT(M23) DT(M24) DT(M25) DT(M26) chainL (143) LYS143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (146) PHE146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 5 (179) TYR179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence mknvgdlmqrlqkmmpahikpafktgeellawqkeqgairsaalerenramkmqrtfnrsgirplhqncsfenyrvecegqmnalskarqyveefdgniasfifsgkpgtgknhlaaaicnelllrgksvliitvadimsamKdtFrnsgtseeqllndlsnvdllvideigvqteskYekviinqivdrrssskrptgmltnsnmeemtkllgervmdrmrlgnslwvifnwdsyrsr >6qfd_AB:"Winged_helix"_DNA-binding_domain; title=THE COMPLEX STRUCTURE OF HSROSR-S4 (VNG0258/ROSR-S4) organism=Halobacterium salinarum NRC-1 DNA sequence DA(E1):DT(F28) DC(E2):DG(F27) DC(E3):DG(F26) DA(E4):DT(F25) DC(E5):DG(F24) DA(E6):DT(F23) DT(E7):DA(F22) DG(E8):DC(F21) DT(E9):DA(F20) DC(E10):DG(F19) DA(E11):DT(F18) DA(E12):DT(F17) DC(E13):DG(F16) DG(E14):DC(F15) DC(E15):DG(F14) DG(E16):DC(F13) DT(E17):DA(F12) DT(E18):DA(F11) DT(E19):DA(F10) DA(E20):DT(F9) DC(E21):DG(F8) DA(E22):DT(F7) DC(E23):DG(F6) DT(E24):DA(F5) DT(E25):DA(F4) DC(E26):DG(F3) DG(E27):DC(F2) DG(E28):DC(F1) chainA ( 28) LEU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 ( 43) ASN49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 44) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 16 0 0 0 0 0 0 ( 46) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 48) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 13 0 0 0 0 0 0 ( 49) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 68) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 4 0 0 chainB ( 29) LEU34 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ASN49 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) HIS50 0 0 0 0 0 0 16 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG52 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR54 0 0 0 0 0 0 12 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG74 0 0 3 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence darsdardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale/pdarsdardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale >6qfd_B:"Winged_helix"_DNA-binding_domain; title=THE COMPLEX STRUCTURE OF HSROSR-S4 (VNG0258/ROSR-S4) organism=Halobacterium salinarum NRC-1 DNA sequence DC(F1):DG(E28) DC(F2):DG(E27) DG(F3):DC(E26) DA(F4):DT(E25) DA(F5):DT(E24) DG(F6):DC(E23) DT(F7):DA(E22) DG(F8):DC(E21) DT(F9):DA(E20) DA(F10):DT(E19) DA(F11):DT(E18) DA(F12):DT(E17) DC(F13):DG(E16) DG(F14):DC(E15) DC(F15):DG(E14) DG(F16):DC(E13) DT(F17):DA(E12) DT(F18):DA(E11) DG(F19):DC(E10) DA(F20):DT(E9) DC(F21):DG(E8) DA(F22):DT(E7) DT(F23):DA(E6) DG(F24):DC(E5) DT(F25):DA(E4) DG(F26):DC(E3) DG(F27):DC(E2) DT(F28):DA(E1) chainB ( 29) LEU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 ( 44) ASN49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 45) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 16 0 0 0 0 0 0 ( 47) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 49) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 12 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 69) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 3 0 0 prot.sequence pdarsdardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale >6qh0_A:"Winged_helix"_DNA-binding_domain; title=THE COMPLEX STRUCTURE OF HSROSR-S5 (VNG0258H/ROSR-S5) organism=Halobacterium salinarum NRC-1 DNA sequence DA(G1):DT(H28) DA(G2):DT(H27) DG(G3):DC(H26) DT(G4):DA(H25) DC(G5):DG(H24) DA(G6):DT(H23) DT(G7):DA(H22) DG(G8):DC(H21) DT(G9):DA(H20) DA(G10):DT(H19) DA(G11):DT(H18) DG(G12):DC(H17) DA(G13):DT(H16) DG(G14):DC(H15) DG(G15):DC(H14) DG(G16):DC(H13) DA(G17):DT(H12) DT(G18):DA(H11) DG(G19):DC(H10) DA(G20):DT(H9) DC(G21):DG(H8) DA(G22):DT(H7) DC(G23):DG(H6) DT(G24):DA(H5) DT(G25):DA(H4) DC(G26):DG(H3) DG(G27):DC(H2) DC(G28):DG(H1) chainA ( 28) LEU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 ( 43) ASN49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 44) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 21 0 0 0 0 0 0 ( 46) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 48) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 10 0 0 0 0 0 0 ( 49) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 68) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 6 0 0 prot.sequence darsdardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale >6qh0_AB:"Winged_helix"_DNA-binding_domain; title=THE COMPLEX STRUCTURE OF HSROSR-S5 (VNG0258H/ROSR-S5) organism=Halobacterium salinarum NRC-1 DNA sequence DG(H1):DC(G28) DC(H2):DG(G27) DG(H3):DC(G26) DA(H4):DT(G25) DA(H5):DT(G24) DG(H6):DC(G23) DT(H7):DA(G22) DG(H8):DC(G21) DT(H9):DA(G20) DC(H10):DG(G19) DA(H11):DT(G18) DT(H12):DA(G17) DC(H13):DG(G16) DC(H14):DG(G15) DC(H15):DG(G14) DT(H16):DA(G13) DC(H17):DG(G12) DT(H18):DA(G11) DT(H19):DA(G10) DA(H20):DT(G9) DC(H21):DG(G8) DA(H22):DT(G7) DT(H23):DA(G6) DG(H24):DC(G5) DA(H25):DT(G4) DC(H26):DG(G3) DT(H27):DA(G2) DT(H28):DA(G1) chainA ( 28) LEU34 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ASN49 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) HIS50 0 0 0 0 0 0 21 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG52 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) TYR54 0 0 0 0 0 0 10 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) PRO55 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG74 0 0 6 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 29) LEU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 44) ASN49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 45) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 12 0 0 0 0 0 0 ( 47) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 49) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 11 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 69) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 4 0 0 prot.sequence darsdardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale/pdarsdardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale >6qh0_CD:"Winged_helix"_DNA-binding_domain; title=THE COMPLEX STRUCTURE OF HSROSR-S5 (VNG0258H/ROSR-S5) organism=Halobacterium salinarum NRC-1 DNA sequence DA(E1):DT(F28) DA(E2):DT(F27) DG(E3):DC(F26) DT(E4):DA(F25) DC(E5):DG(F24) DA(E6):DT(F23) DT(E7):DA(F22) DG(E8):DC(F21) DT(E9):DA(F20) DA(E10):DT(F19) DA(E11):DT(F18) DG(E12):DC(F17) DA(E13):DT(F16) DG(E14):DC(F15) DG(E15):DC(F14) DG(E16):DC(F13) DA(E17):DT(F12) DT(E18):DA(F11) DG(E19):DC(F10) DA(E20):DT(F9) DC(E21):DG(F8) DA(E22):DT(F7) DC(E23):DG(F6) DT(E24):DA(F5) DT(E25):DA(F4) DC(E26):DG(F3) DG(E27):DC(F2) DC(E28):DG(F1) chainC ( 23) LEU34 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ASN49 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) HIS50 0 0 0 0 0 0 17 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG52 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR54 0 0 0 0 0 0 11 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PRO55 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG74 0 0 4 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 27) LEU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 42) ASN49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 ( 43) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 18 0 0 0 0 0 0 ( 45) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 47) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 11 0 0 0 0 0 0 ( 48) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 67) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 3 0 0 prot.sequence ardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale/arsdardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale >6qhd_A:p53-like_transcription_factors;STAT;SH2_domain; title=LYSINE ACETYLATED AND TYROSINE PHOSPHORYLATED STAT3 IN A COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(D1002):DC(C1018) DC(D1003):DG(C1017) DA(D1004):DT(C1016) DT(D1005):DA(C1015) DT(D1006):DA(C1014) DT(D1007):DA(C1013) DC(D1008):DG(C1012) DC(D1009):DG(C1011) DC(D1010):DG(C1010) DG(D1011):DC(C1009) DT(D1012):DA(C1008) DA(D1013):DT(C1007) DA(D1014):DT(C1006) DA(D1015):DT(C1005) DT(D1016):DA(C1004) DC(D1017):DG(C1003) DT(D1018):DA(C1002) chainA (196) LYS340 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 (312) SER465 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 (313) ASN466 0 0 0 0 2 9 7 3 0 0 0 0 0 0 0 0 0 (314) ILE467 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (316) GLN469 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vvtekqqmleqhlqdvrkrvqdleqkmkvvenlqddfdfnyktlksqgdsvtrqkmqqleqmltaldqmrrsivselagllsameyvqktltdeeladwkrrqqiaciggppnicldrlenwitslaesqlqtrqqikkleelqqkvsykgdpivqhrpmleerivelfrnlmksafvverqpcmpmhpdrplviKtgvqfttkvrllvkfpelnyqlkikvcidkdsgdvaalrgsrkfnilgtntkvmnmeesnngslsaefkhltlreqrcaslivteelhlitfetevyhqglkidlethslpvvviSNIcQmpnawasilwynmltnnpknvnfftkppigtwdqvaevlswqfssttkrglsieqlttlaekllgpysgcqitwakfckenmagkgfsfwvwldniidlvkkyilalwnegyimgfiskererailstkppgtfllrfsesskeggvtftwveqiqsvepytkqqlnnmsfaeiimgylvsplvylypdipkeeafgycraplktkficvtp >6qhd_AB:p53-like_transcription_factors;STAT;SH2_domain; title=LYSINE ACETYLATED AND TYROSINE PHOSPHORYLATED STAT3 IN A COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(D1002):DC(C1018) DC(D1003):DG(C1017) DA(D1004):DT(C1016) DT(D1005):DA(C1015) DT(D1006):DA(C1014) DT(D1007):DA(C1013) DC(D1008):DG(C1012) DC(D1009):DG(C1011) DC(D1010):DG(C1010) DG(D1011):DC(C1009) DT(D1012):DA(C1008) DA(D1013):DT(C1007) DA(D1014):DT(C1006) DA(D1015):DT(C1005) DT(D1016):DA(C1004) DC(D1017):DG(C1003) DT(D1018):DA(C1002) chainA (196) LYS340 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 (312) SER465 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 (313) ASN466 0 0 0 0 2 9 7 3 0 0 0 0 0 0 0 0 0 (314) ILE467 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (316) GLN469 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 chainB (195) LYS340 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 (310) SER465 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 (311) ASN466 0 0 0 0 0 0 0 0 0 3 11 10 2 0 0 0 0 (312) ILE467 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (313) CYS468 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (314) GLN469 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence vvtekqqmleqhlqdvrkrvqdleqkmkvvenlqddfdfnyktlksqgdsvtrqkmqqleqmltaldqmrrsivselagllsameyvqktltdeeladwkrrqqiaciggppnicldrlenwitslaesqlqtrqqikkleelqqkvsykgdpivqhrpmleerivelfrnlmksafvverqpcmpmhpdrplviKtgvqfttkvrllvkfpelnyqlkikvcidkdsgdvaalrgsrkfnilgtntkvmnmeesnngslsaefkhltlreqrcaslivteelhlitfetevyhqglkidlethslpvvviSNIcQmpnawasilwynmltnnpknvnfftkppigtwdqvaevlswqfssttkrglsieqlttlaekllgpysgcqitwakfckenmagkgfsfwvwldniidlvkkyilalwnegyimgfiskererailstkppgtfllrfsesskeggvtftwveqiqsvepytkqqlnnmsfaeiimgylvsplvylypdipkeeafgycraplktkficvtp/vvtekqqmleqhlqdvrkrvqdleqkmkvvenlqddfdfnyktlksqgsvtrqkmqqleqmltaldqmrrsivselagllsameyvqktltdeeladwkrrqqiaciggppnicldrlenwitslaesqlqtrqqikkleelqqkvsykgdpivqhrpmleerivelfrnlmksafvverqpcmpmhpdrplviKtgvqfttkvrllvkfpelnyqlkikvcidkdsgdvaalrgsrkfnilgtntkvmnmeesnngslsaefkhltlreqraslivteelhlitfetevyhqglkidlethslpvvviSNICQmpnawasilwynmltnnpknvnfftkppigtwdqvaevlswqfssttkrglsieqlttlaekllgpysgcqitwakfckenmagkgfsfwvwldniidlvkkyilalwnegyimgfiskererailstkppgtfllrfsesskeggvtftwvetqiqsvepytkqqlnnmsfaeiimgykiilvsplvylypdipkeeafgycraplktkficvtp >6qib_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE CRYSTAL STRUCTURE OF POL2CORE IN COMPLEX WITH DNA AND AN INCOMING NUCLEOTIDE, CARRYING AN FE-S CLUSTER organism=Saccharomyces cerevisiae DNA sequence DA(T7):DT(P10) DA(T8):DT(P9) DC(T9):DG(P8) DG(T10):DC(P7) DC(T11):DG(P6) DG(T12):DC(P5) DG(T13):DC(P4) DT(T14):DA(P3) DT(T15):DA(P2) DA(T16):DT(P1) chainA (376) GLN434 0 1 0 0 0 0 0 0 0 0 (905) LYS967 6 4 0 0 0 0 0 0 0 0 (926) ARG988 0 0 4 7 0 0 0 0 0 0 (988) ARG1050 0 0 0 0 1 0 0 0 0 0 prot.sequence alsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqeqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnannnvqrniynvvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafaiattkpplkfpdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwvkrdsylpQgsqglkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgtgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasmypnimttnrlqpdsikaerdcascdfnrpgktcarklkwawrgeffpskmdeynmikralqnetfpnkkkkvltfdelsyadqvihikkrlteysrkvyhrvkvseivereaivcqrenpfyvdtvksfrdrryefkglaktwkgnlskidpsdkhardeakkmivlydslqlahkvilnsfygyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKryavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenRsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrkia >6qil_A:"Winged_helix"_DNA-binding_domain; title=THE COMPLEX STRUCTURE OF HSROSR-S1 (VNG0258H/ROSR-S1) organism=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) DNA sequence DA(F1):DT(E28) DG(F2):DC(E27) DA(F3):DT(E26) DA(F4):DT(E25) DC(F5):DG(E24) DA(F6):DT(E23) DT(F7):DA(E22) DG(F8):DC(E21) DT(F9):DA(E20) DC(F10):DG(E19) DA(F11):DT(E18) DG(F12):DC(E17) DA(F13):DT(E16) DC(F14):DG(E15) DA(F15):DT(E14) DA(F16):DT(E13) DT(F17):DA(E12) DT(F18):DA(E11) DT(F19):DA(E10) DA(F20):DT(E9) DC(F21):DG(E8) DA(F22):DT(E7) DC(F23):DG(E6) DC(F24):DG(E5) DT(F25):DA(E4) DC(F26):DG(E3) DG(F27):DC(E2) DC(F28):DG(E1) chainA ( 28) LEU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 43) ASN49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 ( 44) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 14 0 0 0 0 0 0 ( 46) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 48) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 11 0 0 0 0 0 0 ( 49) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 68) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 5 0 0 prot.sequence darsdardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale >6qil_AB:"Winged_helix"_DNA-binding_domain; title=THE COMPLEX STRUCTURE OF HSROSR-S1 (VNG0258H/ROSR-S1) organism=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) DNA sequence DA(F1):DT(E28) DG(F2):DC(E27) DA(F3):DT(E26) DA(F4):DT(E25) DC(F5):DG(E24) DA(F6):DT(E23) DT(F7):DA(E22) DG(F8):DC(E21) DT(F9):DA(E20) DC(F10):DG(E19) DA(F11):DT(E18) DG(F12):DC(E17) DA(F13):DT(E16) DC(F14):DG(E15) DA(F15):DT(E14) DA(F16):DT(E13) DT(F17):DA(E12) DT(F18):DA(E11) DT(F19):DA(E10) DA(F20):DT(E9) DC(F21):DG(E8) DA(F22):DT(E7) DC(F23):DG(E6) DC(F24):DG(E5) DT(F25):DA(E4) DC(F26):DG(E3) DG(F27):DC(E2) DC(F28):DG(E1) chainA ( 28) LEU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 43) ASN49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 ( 44) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 14 0 0 0 0 0 0 ( 46) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 48) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 11 0 0 0 0 0 0 ( 49) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 68) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 5 0 0 chainB ( 29) LEU34 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ASN49 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) HIS50 0 0 0 0 0 0 14 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG52 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR54 0 0 0 0 0 0 12 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG74 0 0 5 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence darsdardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale/pdarsdardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale >6qil_CD:"Winged_helix"_DNA-binding_domain; title=THE COMPLEX STRUCTURE OF HSROSR-S1 (VNG0258H/ROSR-S1) organism=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) DNA sequence DA(H1):DT(G28) DG(H2):DC(G27) DA(H3):DT(G26) DA(H4):DT(G25) DC(H5):DG(G24) DA(H6):DT(G23) DT(H7):DA(G22) DG(H8):DC(G21) DT(H9):DA(G20) DC(H10):DG(G19) DA(H11):DT(G18) DG(H12):DC(G17) DA(H13):DT(G16) DC(H14):DG(G15) DA(H15):DT(G14) DA(H16):DT(G13) DT(H17):DA(G12) DT(H18):DA(G11) DT(H19):DA(G10) DA(H20):DT(G9) DC(H21):DG(G8) DA(H22):DT(G7) DC(H23):DG(G6) DC(H24):DG(G5) DT(H25):DA(G4) DC(H26):DG(G3) DG(H27):DC(G2) DC(H28):DG(G1) chainC ( 25) LEU34 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ASN49 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) HIS50 0 0 0 0 0 0 12 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG52 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) TYR54 0 0 0 0 0 0 11 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) PRO55 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ARG74 0 0 5 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 27) LEU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 42) ASN49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 43) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 14 0 0 0 0 0 0 ( 45) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 47) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 11 0 0 0 0 0 0 ( 48) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 67) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 3 0 0 prot.sequence sdardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale/arsdardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale >6qld_f:Histone-fold; title=STRUCTURE OF INNER KINETOCHORE CCAN-CENP-A COMPLEX organism=? DNA sequence DT(G2):DA(J-2) DC(G3):DG(J-3) DG(G4):DC(J-4) DA(G5):DT(J-5) DG(G6):DC(J-6) DA(G7):DT(J-7) DA(G8):DT(J-8) DT(G9):DA(J-9) DC(G10):DG(J-10) DC(G11):DG(J-11) DC(G12):DG(J-12) DG(G13):DC(J-13) DG(G14):DC(J-14) DT(G15):DA(J-15) DG(G16):DC(J-16) DC(G17):DG(J-17) DC(G18):DG(J-18) DG(G19):DC(J-19) DA(G20):DT(J-20) DG(G21):DC(J-21) DG(G22):DC(J-22) DC(G23):DG(J-23) DC(G24):DG(J-24) DG(G25):DC(J-25) DC(G26):DG(J-26) DT(G27):DA(J-27) DC(G28):DG(J-28) DA(G29):DT(J-29) DA(G30):DT(J-30) DT(G31):DA(J-31) DT(G32):DA(J-32) DG(G33):DC(J-33) DG(G34):DC(J-34) DT(G35):DA(J-35) DC(G36):DG(J-36) DG(G37):DC(J-37) DT(G38):DA(J-38) DA(G39):DT(J-39) DG(G40):DC(J-40) DA(G41):DT(J-41) DC(G42):DG(J-42) DA(G43):DT(J-43) DG(G44):DC(J-44) DC(G45):DG(J-45) DT(G46):DA(J-46) DC(G47):DG(J-47) DT(G48):DA(J-48) DA(G49):DT(J-49) DG(G50):DC(J-50) DC(G51):DG(J-51) DA(G52):DT(J-52) DC(G53):DG(J-53) DG(G55):DC(J-55) DC(G56):DG(J-56) DT(G57):DA(J-57) DT(G58):DA(J-58) DA(G59):DT(J-59) DA(G60):DT(J-60) DA(G61):DT(J-61) DC(G62):DG(J-62) DG(G63):DC(J-63) DC(G64):DG(J-64) DA(G65):DT(J-65) DC(G66):DG(J-66) DG(G67):DC(J-67) DT(G68):DA(J-68) DA(G69):DT(J-69) DC(G70):DG(J-70) DG(G71):DC(J-71) DC(G72):DG(J-72) DG(G73):DC(J-73) DC(G74):DG(J-74) DT(G75):DA(J-75) DG(G76):DC(J-76) DT(G77):DA(J-77) DC(G78):DG(J-78) DC(G79):DG(J-79) DC(G80):DG(J-80) DC(G81):DG(J-81) DC(G82):DG(J-82) DG(G83):DC(J-83) DC(G84):DG(J-84) DG(G85):DC(J-85) DT(G86):DA(J-86) DT(G87):DA(J-87) DT(G88):DA(J-88) DT(G89):DA(J-89) DA(G90):DT(J-90) DA(G91):DT(J-91) DC(G92):DG(J-92) DC(G93):DG(J-93) DG(G94):DC(J-94) DC(G95):DG(J-95) DC(G96):DG(J-96) DA(G97):DT(J-97) DA(G98):DT(J-98) DG(G99):DC(J-99) DG(G100):DC(J-100) DG(G101):DC(J-101) DG(G102):DC(J-102) DA(G103):DT(J-103) DT(G104):DA(J-104) DT(G105):DA(J-105) DA(G106):DT(J-106) DC(G107):DG(J-107) DT(G108):DA(J-108) DC(G109):DG(J-109) DC(G110):DG(J-110) DC(G111):DG(J-111) DT(G112):DA(J-112) DA(G113):DT(J-113) DG(G114):DC(J-114) DT(G115):DA(J-115) DC(G116):DG(J-116) DT(G117):DA(J-117) DC(G118):DG(J-118) DC(G119):DG(J-119) DA(G120):DT(J-120) DG(G121):DC(J-121) DG(G122):DC(J-122) DC(G123):DG(J-123) DA(G124):DT(J-124) DC(G125):DG(J-125) chainf ( 22) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dniqgitkpairrlarrggvkRisgliyeevravlksflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfgg >6qtk_ABCD:Type_II_DNA_topoisomerase; title=2.31A STRUCTURE OF GEPOTIDACIN WITH S.AUREUS DNA GYRASE AND DOUBLY NICKED DNA organism=STAPHYLOCOCCUS AUREUS / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DA(F1):DT(E2020) DG(F2):DC(E2019) DC(F3):DG(E2018) DC(F4):DG(E2017) DG(F5):DC(E2016) DT(F6):DA(E2015) DA(F7):DT(E2014) DG(F8):DC(E2013) DG(F2009):DC(E2012) DT(F2010):DA(E2011) DA(F2011):DT(E2010) DC(F2012):DG(E2009) DC(F2013):DG(E8) DT(F2014):DA(E7) DA(F2015):DT(E6) DC(F2016):DG(E5) DG(F2017):DC(E4) DG(F2018):DC(E3) DC(F2019):DG(E2) chainB ( 44) ARG458 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 46) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 chainA ( 26) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 78) SER85 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (168) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 23 0 0 chainD ( 44) ARG458 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 46) LYS460 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 chainC ( 77) SER85 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (167) ILE175 0 0 0 21 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rinernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/pgkladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavya/inernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/pgkladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavya >6qtk_D:Type_II_DNA_topoisomerase; title=2.31A STRUCTURE OF GEPOTIDACIN WITH S.AUREUS DNA GYRASE AND DOUBLY NICKED DNA organism=STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) DNA sequence DA(F1):DT(E2020) DG(F2):DC(E2019) DC(F3):DG(E2018) DC(F4):DG(E2017) DG(F5):DC(E2016) DT(F6):DA(E2015) DA(F7):DT(E2014) DG(F8):DC(E2013) DG(F2009):DC(E2012) DT(F2010):DA(E2011) DA(F2011):DT(E2010) DC(F2012):DG(E2009) DC(F2013):DG(E8) DT(F2014):DA(E7) DA(F2015):DT(E6) DC(F2016):DG(E5) DG(F2017):DC(E4) DG(F2018):DC(E3) DC(F2019):DG(E2) chainD ( 44) ARG458 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 46) LYS460 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pgkladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavya >6qtp_ABCD:Type_II_DNA_topoisomerase; title=2.37A STRUCTURE OF GEPOTIDACIN WITH S.AUREUS DNA GYRASE AND UNCLEAVED DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(F2):DT(E19) DG(F3):DC(E18) DC(F4):DG(E17) DG(F5):DC(E16) DT(F6):DA(E15) DA(F7):DT(E14) DC(F8):DG(E13) DA(F9):DT(E12) DG(F10):DC(E11) DC(F11):DG(E10) DT(F12):DA(E9) DG(F13):DC(E8) DT(F14):DA(E7) DA(F15):DT(E6) DC(F16):DG(E5) DG(F17):DC(E4) DC(F18):DG(E3) DT(F19):DA(E2) chainB ( 43) ARG458 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 ( 45) LYS460 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 chainA ( 75) SER85 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (165) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 24 0 0 chainD ( 44) LYS460 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 chainC ( 76) SER85 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) GLU88 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE175 0 0 24 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravierqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/gkladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqppykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavya/nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavya >6qtp_D:Type_II_DNA_topoisomerase; title=2.37A STRUCTURE OF GEPOTIDACIN WITH S.AUREUS DNA GYRASE AND UNCLEAVED DNA organism=? DNA sequence DA(E2):DT(F19) DG(E3):DC(F18) DC(E4):DG(F17) DG(E5):DC(F16) DT(E6):DA(F15) DA(E7):DT(F14) DC(E8):DG(F13) DA(E9):DT(F12) DG(E10):DC(F11) DC(E11):DG(F10) DT(E12):DA(F9) DG(E13):DC(F8) DT(E14):DA(F7) DA(E15):DT(F6) DC(E16):DG(F5) DG(E17):DC(F4) DC(E18):DG(F3) DT(E19):DA(F2) chainD ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavya >6qua_AB:"Winged_helix"_DNA-binding_domain; title=THE COMPLEX STRUCTURE OF HSROSR-SG (VNG0258/ROSR-SG) organism=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) DNA sequence DC(E1):DG(F28) DG(E2):DC(F27) DC(E3):DG(F26) DT(E4):DA(F25) DA(E5):DT(F24) DG(E6):DC(F23) DT(E7):DA(F22) DG(E8):DC(F21) DT(E9):DA(F20) DC(E10):DG(F19) DA(E11):DT(F18) DG(E12):DC(F17) DG(E13):DC(F16) DG(E14):DC(F15) DG(E15):DC(F14) DA(E16):DT(F13) DA(E17):DT(F12) DA(E18):DT(F11) DT(E19):DA(F10) DA(E20):DT(F9) DC(E21):DG(F8) DA(E22):DT(F7) DC(E23):DG(F6) DG(E24):DC(F5) DT(E25):DA(F4) DC(E26):DG(F3) DG(E27):DC(F2) DC(E28):DG(F1) chainA ( 25) LEU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 40) ASN49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 41) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 14 0 0 0 0 0 0 ( 45) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 9 0 0 0 0 0 0 ( 46) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 65) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 2 0 0 chainB ( 29) LEU34 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) HIS50 0 0 0 0 0 0 13 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG52 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR54 0 0 0 0 0 0 11 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO55 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG74 0 0 3 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdardltafqkniltvlgeearygLaikreleeyygeevNHgrlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale/pdarsdardltafqkniltvlgeearygLaikreleeyygeevnHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaale >6qua_C:"Winged_helix"_DNA-binding_domain; title=THE COMPLEX STRUCTURE OF HSROSR-SG (VNG0258/ROSR-SG) organism=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) DNA sequence DG(H1):DC(G28) DC(H2):DG(G27) DG(H3):DC(G26) DA(H4):DT(G25) DC(H5):DG(G24) DG(H6):DC(G23) DT(H7):DA(G22) DG(H8):DC(G21) DT(H9):DA(G20) DA(H10):DT(G19) DT(H11):DA(G18) DT(H12):DA(G17) DT(H13):DA(G16) DC(H14):DG(G15) DC(H15):DG(G14) DC(H16):DG(G13) DC(H17):DG(G12) DT(H18):DA(G11) DG(H19):DC(G10) DA(H20):DT(G9) DC(H21):DG(G8) DA(H22):DT(G7) DC(H23):DG(G6) DT(H24):DA(G5) DA(H25):DT(G4) DG(H26):DC(G3) DC(H27):DG(G2) DG(H28):DC(G1) chainC ( 24) LEU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 39) ASN49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 40) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 11 0 0 0 0 0 0 ( 42) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 44) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 10 0 0 0 0 0 0 ( 45) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 64) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 5 0 0 prot.sequence dardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaaleh >6qua_CD:"Winged_helix"_DNA-binding_domain; title=THE COMPLEX STRUCTURE OF HSROSR-SG (VNG0258/ROSR-SG) organism=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) DNA sequence DG(H1):DC(G28) DC(H2):DG(G27) DG(H3):DC(G26) DA(H4):DT(G25) DC(H5):DG(G24) DG(H6):DC(G23) DT(H7):DA(G22) DG(H8):DC(G21) DT(H9):DA(G20) DA(H10):DT(G19) DT(H11):DA(G18) DT(H12):DA(G17) DT(H13):DA(G16) DC(H14):DG(G15) DC(H15):DG(G14) DC(H16):DG(G13) DC(H17):DG(G12) DT(H18):DA(G11) DG(H19):DC(G10) DA(H20):DT(G9) DC(H21):DG(G8) DA(H22):DT(G7) DC(H23):DG(G6) DT(H24):DA(G5) DA(H25):DT(G4) DG(H26):DC(G3) DC(H27):DG(G2) DG(H28):DC(G1) chainC ( 24) LEU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 39) ASN49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 40) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 11 0 0 0 0 0 0 ( 42) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 44) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 10 0 0 0 0 0 0 ( 45) PRO55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 64) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 5 0 0 chainD ( 26) LEU34 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ASN49 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) HIS50 0 0 0 0 0 0 11 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) TYR54 0 0 0 0 0 0 9 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) PRO55 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG74 0 0 3 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dardltafqkniltvlgeearygLaikreleeyygeevNHgRlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaaleh/rsdardltafqkniltvlgeearygLaikreleeyygeevNHgrlYPnlddlvnkglvekseldkRtneyaltnegfdavvddlewtlskfvadadrrervetivaddaaaleh >6qwf_AB:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA-A94V MUTANT FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes DNA sequence DT(D1):DA(C30) DA(D2):DT(C29) DT(D3):DA(C28) DC(D4):DG(C27) DG(D5):DC(C26) DT(D6):DA(C25) DC(D7):DG(C24) DG(D8):DC(C23) DT(D9):DA(C22) DT(D10):DA(C21) DA(D11):DT(C20) DA(D12):DT(C19) DC(D13):DG(C18) DA(D14):DT(C17) DA(D15):DT(C16) DA(D16):DT(C15) DT(D17):DA(C14) DG(D18):DC(C13) DT(D19):DA(C12) DT(D20):DA(C11) DA(D21):DT(C10) DA(D22):DT(C9) DT(D23):DA(C8) DG(D24):DC(C7) DC(D25):DG(C6) DC(D26):DG(C5) DT(D27):DA(C4) DC(D28):DG(C3) DA(D29):DT(C2) DA(D30):DT(C1) chainA (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 5 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 8 5 0 0 0 0 0 0 0 0 0 0 0 chainB (181) HIS182 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 1 4 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 5 13 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatvyvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln/naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatvyvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >6qwf_B:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA-A94V MUTANT FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes DNA sequence DT(C1):DA(D30) DT(C2):DA(D29) DG(C3):DC(D28) DA(C4):DT(D27) DG(C5):DC(D26) DG(C6):DC(D25) DC(C7):DG(D24) DA(C8):DT(D23) DT(C9):DA(D22) DT(C10):DA(D21) DA(C11):DT(D20) DA(C12):DT(D19) DC(C13):DG(D18) DA(C14):DT(D17) DT(C15):DA(D16) DT(C16):DA(D15) DT(C17):DA(D14) DG(C18):DC(D13) DT(C19):DA(D12) DT(C20):DA(D11) DA(C21):DT(D10) DA(C22):DT(D9) DC(C23):DG(D8) DG(C24):DC(D7) DA(C25):DT(D6) DC(C26):DG(D5) DG(C27):DC(D4) DA(C28):DT(D3) DT(C29):DA(D2) DA(C30):DT(D1) chainB (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 4 1 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 13 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatvyvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >6qwh_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA-L140H MUTANT FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes DNA sequence DT(D1):DA(C30) DA(D2):DT(C29) DT(D3):DA(C28) DC(D4):DG(C27) DG(D5):DC(C26) DT(D6):DA(C25) DC(D7):DG(C24) DG(D8):DC(C23) DT(D9):DA(C22) DT(D10):DA(C21) DA(D11):DT(C20) DA(D12):DT(C19) DC(D13):DG(C18) DA(D14):DT(C17) DA(D15):DT(C16) DA(D16):DT(C15) DT(D17):DA(C14) DG(D18):DC(C13) DT(D19):DA(C12) DT(D20):DA(C11) DA(D21):DT(C10) DA(D22):DT(C9) DT(D23):DA(C8) DG(D24):DC(C7) DC(D25):DG(C6) DC(D26):DG(C5) DT(D27):DA(C4) DC(D28):DG(C3) DA(D29):DT(C2) DA(D30):DT(C1) chainA (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 4 1 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 8 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingkhgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >6qwh_AB:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA-L140H MUTANT FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes DNA sequence DT(D1):DA(C30) DA(D2):DT(C29) DT(D3):DA(C28) DC(D4):DG(C27) DG(D5):DC(C26) DT(D6):DA(C25) DC(D7):DG(C24) DG(D8):DC(C23) DT(D9):DA(C22) DT(D10):DA(C21) DA(D11):DT(C20) DA(D12):DT(C19) DC(D13):DG(C18) DA(D14):DT(C17) DA(D15):DT(C16) DA(D16):DT(C15) DT(D17):DA(C14) DG(D18):DC(C13) DT(D19):DA(C12) DT(D20):DA(C11) DA(D21):DT(C10) DA(D22):DT(C9) DT(D23):DA(C8) DG(D24):DC(C7) DC(D25):DG(C6) DC(D26):DG(C5) DT(D27):DA(C4) DC(D28):DG(C3) DA(D29):DT(C2) DA(D30):DT(C1) chainA (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 4 1 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 8 3 0 0 0 0 0 0 0 0 0 0 0 chainB (181) HIS182 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 4 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 3 11 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingkhgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln/naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingkhgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >6qwk_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA-L140F MUTANT FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes DNA sequence DT(D1):DA(C30) DA(D2):DT(C29) DT(D3):DA(C28) DC(D4):DG(C27) DG(D5):DC(C26) DT(D6):DA(C25) DC(D7):DG(C24) DG(D8):DC(C23) DT(D9):DA(C22) DT(D10):DA(C21) DA(D11):DT(C20) DA(D12):DT(C19) DC(D13):DG(C18) DA(D14):DT(C17) DA(D15):DT(C16) DA(D16):DT(C15) DT(D17):DA(C14) DG(D18):DC(C13) DT(D19):DA(C12) DT(D20):DA(C11) DA(D21):DT(C10) DA(D22):DT(C9) DT(D23):DA(C8) DG(D24):DC(C7) DC(D25):DG(C6) DC(D26):DG(C5) DT(D27):DA(C4) DC(D28):DG(C3) DA(D29):DT(C2) DA(D30):DT(C1) chainA (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 5 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 8 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingkfgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >6qwk_AB:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA-L140F MUTANT FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes DNA sequence DT(C1):DA(D30) DT(C2):DA(D29) DG(C3):DC(D28) DA(C4):DT(D27) DG(C5):DC(D26) DG(C6):DC(D25) DC(C7):DG(D24) DA(C8):DT(D23) DT(C9):DA(D22) DT(C10):DA(D21) DA(C11):DT(D20) DA(C12):DT(D19) DC(C13):DG(D18) DA(C14):DT(D17) DT(C15):DA(D16) DT(C16):DA(D15) DT(C17):DA(D14) DG(C18):DC(D13) DT(C19):DA(D12) DT(C20):DA(D11) DA(C21):DT(D10) DA(C22):DT(D9) DC(C23):DG(D8) DG(C24):DC(D7) DA(C25):DT(D6) DC(C26):DG(D5) DG(C27):DC(D4) DA(C28):DT(D3) DT(C29):DA(D2) DA(C30):DT(D1) chainA (181) HIS182 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 5 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 5 8 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 4 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 11 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingkfgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln/naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingkfgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln >6qwm_AB:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA-A218G MUTANT FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes DNA sequence DT(D1):DA(C30) DA(D2):DT(C29) DT(D3):DA(C28) DC(D4):DG(C27) DG(D5):DC(C26) DT(D6):DA(C25) DC(D7):DG(C24) DG(D8):DC(C23) DT(D9):DA(C22) DT(D10):DA(C21) DA(D11):DT(C20) DA(D12):DT(C19) DC(D13):DG(C18) DA(D14):DT(C17) DA(D15):DT(C16) DA(D16):DT(C15) DT(D17):DA(C14) DG(D18):DC(C13) DT(D19):DA(C12) DT(D20):DA(C11) DA(D21):DT(C10) DA(D22):DT(C9) DT(D23):DA(C8) DG(D24):DC(C7) DC(D25):DG(C6) DC(D26):DG(C5) DT(D27):DA(C4) DC(D28):DG(C3) DA(D29):DT(C2) DA(D30):DT(C1) chainA (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 5 1 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 4 3 0 0 0 0 0 0 0 0 0 0 0 chainB (181) HIS182 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 5 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 5 11 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkrygpkldewfylacpatwgkln/naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkrygpkldewfylacpatwgkln >6qwm_B:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=THE TRANSCRIPTIONAL REGULATOR PRFA-A218G MUTANT FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF organism=Listeria monocytogenes DNA sequence DT(C1):DA(D30) DT(C2):DA(D29) DG(C3):DC(D28) DA(C4):DT(D27) DG(C5):DC(D26) DG(C6):DC(D25) DC(C7):DG(D24) DA(C8):DT(D23) DT(C9):DA(D22) DT(C10):DA(D21) DA(C11):DT(D20) DA(C12):DT(D19) DC(C13):DG(D18) DA(C14):DT(D17) DT(C15):DA(D16) DT(C16):DA(D15) DT(C17):DA(D14) DG(C18):DC(D13) DT(C19):DA(D12) DT(C20):DA(D11) DA(C21):DT(D10) DA(C22):DT(D9) DC(C23):DG(D8) DG(C24):DC(D7) DA(C25):DT(D6) DC(C26):DG(D5) DG(C27):DC(D4) DA(C28):DT(D3) DT(C29):DA(D2) DA(C30):DT(D1) chainB (181) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 5 0 0 0 0 0 0 0 0 0 (184) ALA185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (186) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 (187) ARG188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 11 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkrygpkldewfylacpatwgkln >6qx1_A:Type_II_DNA_topoisomerase; title=2.7A STRUCTURE OF BENZOISOXAZOLE 3 WITH S.AUREUS DNA GYRASE AND DNA. organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(E2):DC(F2019) DC(E3):DG(F2018) DC(E4):DG(F2017) DG(E5):DC(F2016) DT(E6):DA(F2015) DA(E7):DT(F2014) DG(E8):DC(F2013) DG(E2009):DC(F2012) DT(E2010):DA(F2011) DA(E2011):DT(F2010) DC(E2012):DG(F2009) DC(E2013):DG(F8) DT(E2014):DA(F7) DA(E2015):DT(F6) DC(E2016):DG(F5) DG(E2017):DC(F4) DG(E2018):DC(F3) DC(E2019):DG(F2) DT(E2020):DA(F1) chainA ( 25) ARG33 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) SER85 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) GLU88 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ILE175 0 0 20 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence inernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg >6qx1_ABCD:Type_II_DNA_topoisomerase; title=2.7A STRUCTURE OF BENZOISOXAZOLE 3 WITH S.AUREUS DNA GYRASE AND DNA. organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(F1):DT(E2020) DG(F2):DC(E2019) DC(F3):DG(E2018) DC(F4):DG(E2017) DG(F5):DC(E2016) DT(F6):DA(E2015) DA(F7):DT(E2014) DG(F8):DC(E2013) DG(F2009):DC(E2012) DT(F2010):DA(E2011) DA(F2011):DT(E2010) DC(F2012):DG(E2009) DC(F2013):DG(E8) DT(F2014):DA(E7) DA(F2015):DT(E6) DC(F2016):DG(E5) DG(F2017):DC(E4) DG(F2018):DC(E3) DC(F2019):DG(E2) chainB ( 42) ARG458 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 chainA ( 25) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 77) SER85 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 80) GLU88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (167) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 20 0 0 chainD ( 44) LYS460 0 0 0 0 0 0 3 12 0 0 0 0 0 0 0 0 0 0 0 chainC ( 76) SER85 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE175 0 0 0 22 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence inernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy/nernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >6qx2_BCD: title=3.4A STRUCTURE OF BENZOISOXAZOLE 3 WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(F2):DT(E19) DG(F3):DC(E18) DC(F4):DG(E17) DG(F5):DC(E16) DT(F6):DA(E15) DA(F7):DT(E14) DC(F8):DG(E13) DG(F2009):DC(E12) DG(F2010):DC(E11) DC(F2011):DG(E10) DC(F2012):DG(E9) DG(F2013):DC(E8) DT(F2014):DA(E7) DA(F2015):DT(E6) DC(F2016):DG(E5) DG(F2017):DC(E4) DC(F2018):DG(E3) DT(F2019):DA(E2) chainB ( 42) ARG458 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 chainD ( 44) LYS460 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 chainC ( 17) TYR25 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) SER85 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) GLU88 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ILE175 0 0 26 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqppkglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav/inernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav >6qx2_JKLM: title=3.4A STRUCTURE OF BENZOISOXAZOLE 3 WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(N2):DT(O19) DG(N3):DC(O18) DC(N4):DG(O17) DG(N5):DC(O16) DT(N6):DA(O15) DA(N7):DT(O14) DC(N8):DG(O13) DG(N2009):DC(O12) DG(N2010):DC(O11) DC(N2011):DG(O10) DC(N2012):DG(O9) DG(N2013):DC(O8) DT(N2014):DA(O7) DA(N2015):DT(O6) DC(N2016):DG(O5) DG(N2017):DC(O4) DC(N2018):DG(O3) DT(N2019):DA(O2) chainK ( 45) LYS460 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 75) SER85 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) GLU88 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ILE175 0 0 23 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 chainL ( 76) SER85 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 79) GLU88 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (166) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 26 0 0 prot.sequence ernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/gkladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqppkglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy/nernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavy >6qx2_RSTU: title=3.4A STRUCTURE OF BENZOISOXAZOLE 3 WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(W2):DT(V2019) DG(W3):DC(V2018) DC(W4):DG(V2017) DG(W5):DC(V2016) DT(W6):DA(V2015) DA(W7):DT(V2014) DC(W8):DG(V2013) DG(W2009):DC(V2012) DG(W2010):DC(V2011) DC(W2011):DG(V2010) DC(W2012):DG(V2009) DG(W2013):DC(V8) DT(W2014):DA(V7) DA(W2015):DT(V6) DC(W2016):DG(V5) DG(W2017):DC(V4) DC(W2018):DG(V3) DT(W2019):DA(V2) chainS ( 42) ARG458 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 chainR ( 76) SER85 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 79) GLU88 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (166) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 26 0 0 chainU ( 44) LYS460 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 chainT ( 76) SER85 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) GLU88 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE175 0 0 8 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqppkglemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav/nernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav >6qx2_jklm: title=3.4A STRUCTURE OF BENZOISOXAZOLE 3 WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(n2):DT(o2019) DG(n3):DC(o2018) DC(n4):DG(o2017) DG(n5):DC(o2016) DT(n6):DA(o2015) DA(n7):DT(o2014) DC(n8):DG(o2013) DG(n2009):DC(o2012) DG(n2010):DC(o2011) DC(n2011):DG(o2010) DC(n2012):DG(o2009) DG(n2013):DC(o8) DT(n2014):DA(o7) DA(n2015):DT(o6) DC(n2016):DG(o5) DG(n2017):DC(o4) DC(n2018):DG(o3) DT(n2019):DA(o2) chaink ( 43) ARG458 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 ( 45) LYS460 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 chainj ( 76) SER85 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) GLU88 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ARG122 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (166) ILE175 0 0 25 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainm ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 chainl ( 76) SER85 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 79) GLU88 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (113) ARG122 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (166) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 21 0 0 prot.sequence nernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/gkladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqppkglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavya/nernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav >6qx2_rsu: title=3.4A STRUCTURE OF BENZOISOXAZOLE 3 WITH S.AUREUS DNA GYRASE AND DNA organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(w2):DT(v2019) DG(w3):DC(v2018) DC(w4):DG(v2017) DG(w5):DC(v2016) DT(w6):DA(v2015) DA(w7):DT(v2014) DC(w8):DG(v2013) DG(w2009):DC(v2012) DG(w2010):DC(v2011) DC(w2011):DG(v2010) DC(w2012):DG(v2009) DG(w2013):DC(v8) DT(w2014):DA(v7) DA(w2015):DT(v6) DC(w2016):DG(v5) DG(w2017):DC(v4) DC(w2018):DG(v3) DT(w2019):DA(v2) chains ( 43) ARG458 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 ( 45) LYS460 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 chainr ( 18) TYR25 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 26) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 78) SER85 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 81) GLU88 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (168) ILE175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 26 0 0 chainu ( 44) LYS460 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rinernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrytearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg/gkladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqppkglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednav/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiedna >6qxt_FHWXhwx: title=CAS1-CAS2-CSN2-DNA DIMER COMPLEX FROM THE TYPE II-A CRISPR-CAS SYSTEM organism=STREPTOCOCCUS THERMOPHILUS DNA sequence DA(21):DT(164) DA(22):DT(163) DA(23):DT(162) DA(24):DT(161) DA(25):DT(160) DA(26):DT(159) DA(27):DT(158) DA(28):DT(157) DA(29):DT(156) DA(210):DT(155) DA(211):DT(154) DA(212):DT(153) DA(213):DT(152) DA(214):DT(151) DA(215):DT(150) DA(216):DT(149) DA(217):DT(148) DA(218):DT(147) DA(219):DT(146) DA(220):DT(145) DA(221):DT(144) DA(222):DT(143) DA(223):DT(142) DA(224):DT(141) DA(225):DT(140) DA(226):DT(139) DA(227):DT(138) DA(238):DT(127) DA(239):DT(126) DA(240):DT(125) DA(241):DT(124) DA(242):DT(123) DA(243):DT(122) DA(244):DT(121) DA(245):DT(120) DA(246):DT(119) DA(247):DT(118) DA(248):DT(117) DA(249):DT(116) DA(250):DT(115) DA(251):DT(114) DA(252):DT(113) DA(253):DT(112) DA(254):DT(111) DA(255):DT(110) DA(256):DT(19) DA(257):DT(18) DA(258):DT(17) DA(259):DT(16) DA(260):DT(15) DA(261):DT(14) DA(262):DT(13) DA(263):DT(12) DA(264):DT(11) chainF chainH chainW chainX chainh chainw chainx ( 14) ALA19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LYS23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkinfslldepmevnlgtvlviedvsvfaqlvkefyqydeqsnltifdskirsirsselllitdilgydintsqvlkllhtdivsqlndkpevrseidslvslitdiimaecieneldieydeitllelikalgvrietksctvfekifeilqifkylvkkrilvfvnslsyfskdeiyqileytklsqadvlfleprqiegiqqfildkdyilmpynn/mkinfslldepmevnlgtvlviedvsvfaqlvkefyqydeqsnltifdskirsirsselllitdilgydintsqvlkllhtdivsqlndkpevrseidslvslitdiimaecieneldieydeitllelikalgvrietksctvfekifeilqifkylvkkrilvfvnslsyfskdeiyqileytklsqadvlfleprqiegiqqfildkdyilmpynn/mrmilmfdmptdtaeerkayrkfrkfllsegfimhqfsvysklllnhtantamvgrlkannpkkgnitiltvtekqfarmiylygntsianseerlvflgdny/mrmilmfdmptdtaeerkayrkfrkfllsegfimhqfsvysklllnhtantamvgrlkannpkkgnitiltvtekqfarmiylygntsianseerlvflgdny/mkinfslldepmevnlgtvlviedvsvfaqlvkefyqydeqsnltifdskirsirsselllitdilgydintsqvlkllhtdivsqlndkpevrseidslvslitdiimaecieneldieydeitllelikalgvrietksctvfekifeilqifkylvkkrilvfvnslsyfskdeiyqileytklsqadvlfleprqiegiqqfildkdyilmpynn/mrmilmfdmptdtaeerkayrkfrkfllsegfimhqfsvysklllnhtantamvgrlkannpkkgnitiltvtekqfarmiylygntsianseerlvflgdny/mrmilmfdmptdtAeerKayrkfrkfllsegfimhqfsvysklllnhtantamvgrlkannpkkgnitiltvtekqfarmiylygntsianseerlvflgdny >6qzk_A:Ribonuclease_H-like; title=STRUCTURE OF CLOSTRIDIUM BUTYRICUM ARGONAUTE BOUND TO A GUIDE DNA (5' DEOXYCYTIDINE) AND A 19-MER TARGET DNA organism=Clostridium butyricum DNA sequence DA(C-16):DT(B16) DC(C-15):DG(B15) DA(C-14):DT(B14) DA(C-13):DT(B13) DC(C-12):DG(B12) DC(C-11):DG(B11) DT(C-10):DA(B10) DA(C-9):DT(B9) DC(C-8):DG(B8) DT(C-7):DA(B7) DA(C-6):DT(B6) DC(C-5):DG(B5) DC(C-4):DG(B4) DT(C-3):DA(B3) DC(C-2):DG(B2) chainA ( 33) ASN33 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) HIS35 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLN36 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) THR278 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (279) ARG279 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (298) LYS298 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 (491) THR493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (505) TYR507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (506) TYR508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 (509) ASN511 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 (575) GLU577 0 0 0 5 4 1 0 0 0 0 0 0 0 0 0 (613) ARG615 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 (638) ASN640 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 (713) LYS715 0 0 0 0 0 0 0 0 0 0 0 0 5 8 2 prot.sequence annltfeafegigqlnelnfykyrligkgqidNvHQaiwsvkyklqannffkpvfvkgeilysldelkvipefenvevildgniilsisentdiykdvivfyinnalknikditnyrkyitkntdeiicksilttnlkyqymksekgfklqrkfkispvvfrngkvilylncssdfstdksiyemlndglgvvglqvknkwtnangnifiekvldntisdpgtsgklgqslidyyingnqkyrvekftdedknakviqakiknktynyipqaltpviTReylshtdkkfskqienviKmdmnyryqtlksfvedigvikelnnlhfknqyytnfdfmgfesgvleepvlmgangkikdkkqifingffknpkenvkfgvlypegcmenaqsiarsildfatagkynkqenkyisknlmnigfkpsecifesyklgditeykatarklkehekvgfviavipdmlevenpynpfkkvwaklnipsqmitlkTtekfknivdksglYYlhNialnilgkiggipwiikdmpgnidcfiglavgtrekgihfpacsvlfdkygklinyykptipqsgEkiaetilqeifdnvlisykeengeypknivihragfsRenidwykeyfdkkgikfniievkkNipvkiakvvgsnicnpikgsyvlkndkafivttdikdgvaspnplkiektygdvemksileqiyslsqihvgstKslrlpittgyadkickaieyipqgvvdnrlffl >6r0c_A:Histone-fold; title=HUMAN-D02 NUCLEOSOME CORE PARTICLE WITH BIOTIN-STREPTAVIDIN LABEL organism=HOMO SAPIENS DNA sequence DC(I-71):DG(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DG(I-67):DC(J67) DT(I-66):DA(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DT(I-63):DA(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DC(I-60):DG(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DG(I-55):DC(J55) DT(I-54):DA(J54) DG(I-53):DC(J53) DA(I-52):DT(J52) DA(I-51):DT(J51) DA(I-50):DT(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DC(I-44):DG(J44) DT(I-43):DA(J43) DA(I-42):DT(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DC(I-37):DG(J37) DC(I-36):DG(J36) DT(I-35):DA(J35) DT(I-34):DA(J34) DC(I-33):DG(J33) DC(I-32):DG(J32) DC(I-31):DG(J31) DA(I-30):DT(J30) DG(I-29):DC(J29) DG(I-28):DC(J28) DA(I-27):DT(J27) DA(I-26):DT(J26) DA(I-25):DT(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DT(I-20):DA(J20) DT(I-19):DA(J19) DT(I-18):DA(J18) DC(I-17):DG(J17) DA(I-16):DT(J16) DC(I-15):DG(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DG(I-12):DC(J12) DC(I-11):DG(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DC(I-6):DG(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DT(I-3):DA(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DA(I5):DT(J-5) DT(I6):DA(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DC(I10):DG(J-10) DT(I11):DA(J-11) DT(I12):DA(J-12) DA(I13):DT(J-13) DC(I14):DG(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DG(I17):DC(J-17) DG(I18):DC(J-18) DA(I19):DT(J-19) DA(I20):DT(J-20) DT(I21):DA(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DT(I24):DA(J-24) DT(I25):DA(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DC(I29):DG(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DC(I32):DG(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DC(I38):DG(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DC(I42):DG(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DC(I46):DG(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DA(I52):DT(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DT(I55):DA(J-55) DG(I56):DC(J-56) DA(I57):DT(J-57) DT(I58):DA(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DA(I61):DT(J-61) DA(I62):DT(J-62) DA(I63):DT(J-63) DC(I64):DG(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DG(I68):DC(J-68) DC(I69):DG(J-69) DC(I70):DG(J-70) chainA ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera >6r0c_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN-D02 NUCLEOSOME CORE PARTICLE WITH BIOTIN-STREPTAVIDIN LABEL organism=HOMO SAPIENS DNA sequence DG(J-70):DC(I70) DG(J-69):DC(I69) DC(J-68):DG(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DG(J-64):DC(I64) DT(J-63):DA(I63) DT(J-62):DA(I62) DT(J-61):DA(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DA(J-58):DT(I58) DT(J-57):DA(I57) DC(J-56):DG(I56) DA(J-55):DT(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DT(J-52):DA(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DG(J-46):DC(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DG(J-42):DC(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DG(J-38):DC(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DG(J-32):DC(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DG(J-29):DC(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DA(J-25):DT(I25) DA(J-24):DT(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DA(J-21):DT(I21) DT(J-20):DA(I20) DT(J-19):DA(I19) DC(J-18):DG(I18) DC(J-17):DG(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DG(J-14):DC(I14) DT(J-13):DA(I13) DA(J-12):DT(I12) DA(J-11):DT(I11) DG(J-10):DC(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DA(J-6):DT(I6) DT(J-5):DA(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DA(J3):DT(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DG(J6):DC(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DG(J11):DC(I-11) DC(J12):DG(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DG(J15):DC(I-15) DT(J16):DA(I-16) DG(J17):DC(I-17) DA(J18):DT(I-18) DA(J19):DT(I-19) DA(J20):DT(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DT(J25):DA(I-25) DT(J26):DA(I-26) DT(J27):DA(I-27) DC(J28):DG(I-28) DC(J29):DG(I-29) DT(J30):DA(I-30) DG(J31):DC(I-31) DG(J32):DC(I-32) DG(J33):DC(I-33) DA(J34):DT(I-34) DA(J35):DT(I-35) DG(J36):DC(I-36) DG(J37):DC(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DT(J42):DA(I-42) DA(J43):DT(I-43) DG(J44):DC(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DT(J50):DA(I-50) DT(J51):DA(I-51) DT(J52):DA(I-52) DC(J53):DG(I-53) DA(J54):DT(I-54) DC(J55):DG(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DA(J63):DT(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DA(J66):DT(I-66) DC(J67):DG(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DG(J71):DC(I-71) chainA ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 64) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/kVlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/tRssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/sRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/aktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/srkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiQtavrlllpgelakhavsegtkavtkytss >6r1t_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF LSD2/NPAC-LINKER/NUCLEOSOME CORE PARTICLE COMPLEX: CLASS 1, FREE NUCLESOME organism=XENOPUS LAEVIS DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-16):DA(I17) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 2) HIS18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence kphryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/rrktrkesyaiyvykvlkqvhpdtgisskAmsimnsfvndvferiageasrlahynkrstitsrEiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/rHrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/rktrkesyaiyvykvlkqvhpdtgisskamsiMnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6r1u_E:Histone-fold; title=STRUCTURE OF LSD2/NPAC-LINKER/NUCLEOSOME CORE PARTICLE COMPLEX: CLASS 2 organism=? DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I17):DT(J-16) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) DT(I73):DA(J-73) chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >6r25_E:Histone-fold; title=STRUCTURE OF LSD2/NPAC-LINKER/NUCLEOSOME CORE PARTICLE COMPLEX: CLASS 3 organism=? DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-16):DA(I17) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >6r2v_A: title=ARABIDOPSIS NF-Y/CCAAT-BOX COMPLEX organism=ARABIDOPSIS THALIANA DNA sequence DC(I3):DG(J-3) DT(I4):DA(J-4) DC(I5):DG(J-5) DA(I6):DT(J-6) DT(I7):DA(J-7) DC(I8):DG(J-8) DC(I9):DG(J-9) DA(I10):DT(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DC(I13):DG(J-13) DC(I14):DG(J-14) DT(I15):DA(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DA(I18):DT(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DA(I23):DT(J-23) DT(I24):DA(J-24) DC(I25):DG(J-25) chainA ( 40) ARG211 0 0 0 0 0 0 0 0 2 8 7 7 0 0 0 0 0 0 0 0 0 0 0 ( 43) HIS214 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG218 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG220 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG225 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) PHE226 0 0 0 0 0 0 30 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pifvnakqyqailrrrerrakleaqnklikvrkpylhesRhlHalkRvRgsggRFlntkkhq >6r2v_ABC:Histone-fold; title=ARABIDOPSIS NF-Y/CCAAT-BOX COMPLEX organism=ARABIDOPSIS THALIANA DNA sequence DC(I3):DG(J-3) DT(I4):DA(J-4) DC(I5):DG(J-5) DA(I6):DT(J-6) DT(I7):DA(J-7) DC(I8):DG(J-8) DC(I9):DG(J-9) DA(I10):DT(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DC(I13):DG(J-13) DC(I14):DG(J-14) DT(I15):DA(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DA(I18):DT(J-18) DT(I19):DA(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DA(I23):DT(J-23) DT(I24):DA(J-24) DC(I25):DG(J-25) chainA ( 40) ARG211 0 0 0 0 0 0 0 0 2 8 7 7 0 0 0 0 0 0 0 0 0 0 0 ( 43) HIS214 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG218 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG220 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG225 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) PHE226 0 0 0 0 0 0 30 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 12) ALA35 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 21) ALA74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence pifvnakqyqailrrrerrakleaqnklikvrkpylhesRhlHalkRvRgsggRFlntkkhq/spreqdrflpiAnvsrimkkalpanakiskdaketmqecvsefisfvtgeasdkcqkekrktingddllwamttlgfedyveplkvylqrfre/mtqfkeiekttdfknhslplArikkimkadedvrmisaeapvvfaracemfileltlrswnhteenkrrtlqkndiaaavtrtdifdflvdivpr >6r2v_B:Histone-fold; title=ARABIDOPSIS NF-Y/CCAAT-BOX COMPLEX organism=ARABIDOPSIS THALIANA DNA sequence DG(J-25):DC(I25) DA(J-24):DT(I24) DT(J-23):DA(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DA(J-19):DT(I19) DT(J-18):DA(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DA(J-15):DT(I15) DG(J-14):DC(I14) DG(J-13):DC(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DT(J-10):DA(I10) DG(J-9):DC(I9) DG(J-8):DC(I8) DA(J-7):DT(I7) DT(J-6):DA(I6) DG(J-5):DC(I5) DA(J-4):DT(I4) DG(J-3):DC(I3) chainB ( 12) ALA35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence spreqdrflpiAnvsrimkkalpanakiskdaketmqecvsefisfvtgeasdkcqkekrktingddllwamttlgfedyveplkvylqrfre >6r64_A: title=N-TERMINAL DOMAIN OF MODIFICATION DEPENDENT ECOKMCRA RESTRICTION ENDONUCLEASE (NECO) IN COMPLEX WITH C5MCGG TARGET SEQUENCE organism=Escherichia coli K12 DNA sequence DG(D1):DC(C10) DA(D2):DT(C9) DA(D3):DT(C8) DC(D4):DG(C7) 5CM(D5):DG(C6) DG(D6):5CM(C5) DG(D7):DC(C4) DT(D8):DA(C3) DG(D9):DC(C2) DA(D10):DT(C1) chainA ( 32) SER30 0 0 0 0 0 2 0 0 0 0 ( 33) TRP31 0 0 0 6 5 0 0 0 0 0 ( 35) PRO33 0 0 0 0 0 5 6 7 0 0 (111) ARG109 0 0 0 0 0 0 5 1 0 0 (121) ASN119 0 0 0 4 8 23 0 0 0 0 (122) ARG120 0 3 0 0 0 0 0 0 0 0 (124) LYS122 0 0 0 0 0 1 0 0 0 0 prot.sequence efmhvfdnngielkaecsigeedgvyglilesWgPgdrnkdynialdyiierlvdsgvsqvvvylasssvrkhmhslderkihpgeyftlignsprdirlkmcgyqayfsRtgrkeipsgNRtkrilinvpgiysdsfwasiirg >6r8y_H:Histone-fold; title=CRYO-EM STRUCTURE OF NCP-6-4PP(-1)-UV-DDB organism=HOMO SAPIENS DNA sequence DA(J1):DT(I145) DT(J2):DA(I144) DC(J3):DG(I143) DA(J4):DT(I142) DA(J5):DT(I141) DT(J6):DA(I140) DA(J7):DT(I139) DT(J8):DA(I138) DC(J9):DG(I137) DC(J10):DG(I136) DA(J11):DT(I135) DC(J12):DG(I134) DC(J13):DG(I133) DT(J14):DA(I132) DG(J15):DC(I131) DC(J16):DG(I130) DA(J17):DT(I129) DG(J18):DC(I128) DA(J19):DT(I127) DT(J20):DA(I126) DT(J21):DA(I125) DC(J22):DG(I124) DT(J23):DA(I123) DA(J24):DT(I122) DC(J25):DG(I121) DC(J26):DG(I120) DA(J27):DT(I119) DA(J28):DT(I118) DA(J29):DT(I117) DA(J30):DT(I116) DG(J31):DC(I115) DT(J32):DA(I114) DG(J33):DC(I113) DT(J34):DA(I112) DA(J35):DT(I111) DT(J36):DA(I110) DT(J37):DA(I109) DT(J38):DA(I108) DG(J39):DC(I107) DG(J40):DC(I106) DA(J41):DT(I105) DA(J42):DT(I104) DA(J43):DT(I103) DC(J44):DG(I102) DT(J45):DA(I101) DG(J46):DC(I100) DC(J47):DG(I99) DT(J48):DA(I98) DC(J49):DG(I97) DC(J50):DG(I96) DA(J51):DT(I95) DT(J52):DA(I94) DC(J53):DG(I93) DA(J54):DT(I92) DA(J55):DT(I91) DA(J56):DT(I90) DA(J57):DT(I89) DG(J58):DC(I88) DG(J59):DC(I87) DC(J60):DG(I86) DA(J61):DT(I85) DT(J62):DA(I84) DG(J63):DC(I83) DT(J64):DA(I82) DT(J65):DA(I81) DC(J66):DG(I80) DA(J67):DT(I79) DG(J68):DC(I78) DC(J69):DG(I77) DT(J70):DA(I76) DG(J71):DC(I75) DA(J72):DT(I74) DA(J73):DT(I73) DC(J74):DG(I72) DC(J75):DG(I71) DA(J76):DT(I70) DG(J77):DC(I69) DC(J78):DG(I68) DT(J79):DA(I67) DG(J80):DC(I66) DA(J81):DT(I65) DA(J82):DT(I64) DC(J83):DG(I63) DA(J84):DT(I62) DT(J85):DA(I61) DG(J86):DC(I60) DC(J87):DG(I59) DC(J88):DG(I58) DT(J89):DA(I57) DT(J90):DA(I56) DT(J91):DA(I55) DT(J92):DA(I54) DG(J93):DC(I53) DA(J94):DT(I52) DG(J97):DC(I49) DA(J98):DT(I48) DG(J99):DC(I47) DC(J100):DG(I46) DA(J101):DT(I45) DG(J102):DC(I44) DT(J103):DA(I43) DT(J104):DA(I42) DT(J105):DA(I41) DC(J106):DG(I40) DC(J107):DG(I39) DA(J108):DT(I38) DA(J109):DT(I37) DA(J110):DT(I36) DT(J111):DA(I35) DA(J112):DT(I34) DC(J113):DG(I33) DA(J114):DT(I32) DC(J115):DG(I31) DT(J116):DA(I30) DT(J117):DA(I29) DT(J118):DA(I28) DT(J119):DA(I27) DG(J120):DC(I26) DG(J121):DC(I25) DT(J122):DA(I24) DA(J123):DT(I23) DG(J124):DC(I22) DA(J125):DT(I21) DA(J126):DT(I20) DT(J127):DA(I19) DC(J128):DG(I18) DT(J129):DA(I17) DG(J130):DC(I16) DC(J131):DG(I15) DA(J132):DT(I14) DG(J133):DC(I13) DG(J134):DC(I12) DT(J135):DA(I11) DG(J136):DC(I10) DG(J137):DC(I9) DA(J138):DT(I8) DT(J139):DA(I7) DA(J140):DT(I6) DT(J141):DA(I5) DT(J142):DA(I4) DG(J143):DC(I3) DA(J144):DT(I2) DT(J145):DA(I1) chainH ( 5) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rkrsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6r8z_G:Histone-fold; title=CRYO-EM STRUCTURE OF NCP_THF2(-1)-UV-DDB organism=HOMO SAPIENS DNA sequence DA(J1):DT(I145) DT(J2):DA(I144) DC(J3):DG(I143) DA(J4):DT(I142) DA(J5):DT(I141) DT(J6):DA(I140) DA(J7):DT(I139) DT(J8):DA(I138) DC(J9):DG(I137) DC(J10):DG(I136) DA(J11):DT(I135) DC(J12):DG(I134) DC(J13):DG(I133) DT(J14):DA(I132) DG(J15):DC(I131) DC(J16):DG(I130) DA(J17):DT(I129) DG(J18):DC(I128) DA(J19):DT(I127) DT(J20):DA(I126) DT(J21):DA(I125) DC(J22):DG(I124) DT(J23):DA(I123) DA(J24):DT(I122) DC(J25):DG(I121) DC(J26):DG(I120) DA(J27):DT(I119) DA(J28):DT(I118) DA(J29):DT(I117) DA(J30):DT(I116) DG(J31):DC(I115) DT(J32):DA(I114) DG(J33):DC(I113) DT(J34):DA(I112) DA(J35):DT(I111) DT(J36):DA(I110) DT(J37):DA(I109) DT(J38):DA(I108) DG(J39):DC(I107) DG(J40):DC(I106) DA(J41):DT(I105) DA(J42):DT(I104) DA(J43):DT(I103) DC(J44):DG(I102) DT(J45):DA(I101) DG(J46):DC(I100) DC(J47):DG(I99) DT(J48):DA(I98) DC(J49):DG(I97) DC(J50):DG(I96) DT(J52):DA(I94) DC(J53):DG(I93) DA(J54):DT(I92) DA(J55):DT(I91) DA(J56):DT(I90) DA(J57):DT(I89) DG(J58):DC(I88) DG(J59):DC(I87) DC(J60):DG(I86) DA(J61):DT(I85) DT(J62):DA(I84) DG(J63):DC(I83) DT(J64):DA(I82) DT(J65):DA(I81) DC(J66):DG(I80) DA(J67):DT(I79) DG(J68):DC(I78) DC(J69):DG(I77) DT(J70):DA(I76) DG(J71):DC(I75) DA(J72):DT(I74) DA(J73):DT(I73) DC(J74):DG(I72) DC(J75):DG(I71) DA(J76):DT(I70) DG(J77):DC(I69) DC(J78):DG(I68) DT(J79):DA(I67) DG(J80):DC(I66) DA(J81):DT(I65) DA(J82):DT(I64) DC(J83):DG(I63) DA(J84):DT(I62) DT(J85):DA(I61) DG(J86):DC(I60) DC(J87):DG(I59) DC(J88):DG(I58) DT(J89):DA(I57) DT(J90):DA(I56) DT(J91):DA(I55) DT(J92):DA(I54) DG(J93):DC(I53) DA(J94):DT(I52) 3DR(J95):DA(I51) 3DR(J96):DC(I50) DG(J97):DC(I49) DA(J98):DT(I48) DG(J99):DC(I47) DC(J100):DG(I46) DA(J101):DT(I45) DG(J102):DC(I44) DT(J103):DA(I43) DT(J104):DA(I42) DT(J105):DA(I41) DC(J106):DG(I40) DC(J107):DG(I39) DA(J108):DT(I38) DA(J109):DT(I37) DA(J110):DT(I36) DT(J111):DA(I35) DA(J112):DT(I34) DC(J113):DG(I33) DA(J114):DT(I32) DC(J115):DG(I31) DT(J116):DA(I30) DT(J117):DA(I29) DT(J118):DA(I28) DT(J119):DA(I27) DG(J120):DC(I26) DG(J121):DC(I25) DT(J122):DA(I24) DA(J123):DT(I23) DG(J124):DC(I22) DA(J125):DT(I21) DA(J126):DT(I20) DT(J127):DA(I19) DC(J128):DG(I18) DT(J129):DA(I17) DG(J130):DC(I16) DC(J131):DG(I15) DA(J132):DT(I14) DG(J133):DC(I13) DG(J134):DC(I12) DT(J135):DA(I11) DG(J136):DC(I10) DG(J137):DC(I9) DA(J138):DT(I8) DT(J139):DA(I7) DA(J140):DT(I6) DT(J141):DA(I5) DT(J142):DA(I4) DG(J143):DC(I3) DA(J144):DT(I2) DT(J145):DA(I1) chainG ( 3) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) HIS124 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) LYS126 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkktesHhK >6r90_L:WD40_repeat-like; title=CRYO-EM STRUCTURE OF NCP-THF2(+1)-UV-DDB CLASS A organism=HOMO SAPIENS DNA sequence DA(I1):DT(J145) DT(I2):DA(J144) DC(I3):DG(J143) DA(I4):DT(J142) DA(I5):DT(J141) DT(I6):DA(J140) DA(I7):DT(J139) DT(I8):DA(J138) DC(I9):DG(J137) DC(I10):DG(J136) DA(I11):DT(J135) DC(I12):DG(J134) DC(I13):DG(J133) DT(I14):DA(J132) DG(I15):DC(J131) DC(I16):DG(J130) DA(I17):DT(J129) DG(I18):DC(J128) DA(I19):DT(J127) DT(I20):DA(J126) DT(I21):DA(J125) DC(I22):DG(J124) DT(I23):DA(J123) DA(I24):DT(J122) DC(I25):DG(J121) DC(I26):DG(J120) DA(I27):DT(J119) DA(I28):DT(J118) DA(I29):DT(J117) DA(I30):DT(J116) DG(I31):DC(J115) DT(I32):DA(J114) DG(I33):DC(J113) DT(I34):DA(J112) DA(I35):DT(J111) DT(I36):DA(J110) DT(I37):DA(J109) DT(I38):DA(J108) DG(I39):DC(J107) DG(I40):DC(J106) DA(I41):DT(J105) DA(I42):DT(J104) DA(I43):DT(J103) DC(I44):DG(J102) DT(I45):DA(J101) DG(I46):DC(J100) DC(I47):DG(J99) DT(I48):DA(J98) DC(I49):DG(J97) DC(I50):DG(J96) DA(I51):DT(J95) DT(I52):3DR(J94) DC(I53):3DR(J93) DA(I54):DT(J92) DA(I55):DT(J91) DA(I56):DT(J90) DA(I57):DT(J89) DG(I58):DC(J88) DG(I59):DC(J87) DC(I60):DG(J86) DA(I61):DT(J85) DT(I62):DA(J84) DG(I63):DC(J83) DT(I64):DA(J82) DT(I65):DA(J81) DC(I66):DG(J80) DA(I67):DT(J79) DG(I68):DC(J78) DC(I69):DG(J77) DT(I70):DA(J76) DG(I71):DC(J75) DG(I72):DC(J74) DT(I73):DA(J73) DT(I74):DA(J72) DC(I75):DG(J71) DA(I76):DT(J70) DG(I77):DC(J69) DC(I78):DG(J68) DT(I79):DA(J67) DG(I80):DC(J66) DA(I81):DT(J65) DA(I82):DT(J64) DC(I83):DG(J63) DA(I84):DT(J62) DT(I85):DA(J61) DG(I86):DC(J60) DC(I87):DG(J59) DC(I88):DG(J58) DT(I89):DA(J57) DT(I90):DA(J56) DT(I91):DA(J55) DT(I92):DA(J54) DG(I93):DC(J53) DA(I94):DT(J52) DT(I95):DA(J51) DG(I96):DC(J50) DG(I97):DC(J49) DA(I98):DT(J48) DG(I99):DC(J47) DC(I100):DG(J46) DA(I101):DT(J45) DG(I102):DC(J44) DT(I103):DA(J43) DT(I104):DA(J42) DT(I105):DA(J41) DC(I106):DG(J40) DC(I107):DG(J39) DA(I108):DT(J38) DA(I109):DT(J37) DA(I110):DT(J36) DT(I111):DA(J35) DA(I112):DT(J34) DC(I113):DG(J33) DA(I114):DT(J32) DC(I115):DG(J31) DT(I116):DA(J30) DT(I117):DA(J29) DT(I118):DA(J28) DT(I119):DA(J27) DG(I120):DC(J26) DG(I121):DC(J25) DT(I122):DA(J24) DA(I123):DT(J23) DG(I124):DC(J22) DA(I125):DT(J21) DA(I126):DT(J20) DT(I127):DA(J19) DC(I128):DG(J18) DT(I129):DA(J17) DG(I130):DC(J16) DC(I131):DG(J15) DA(I132):DT(J14) DG(I133):DC(J13) DG(I134):DC(J12) DT(I135):DA(J11) DG(I136):DC(J10) DG(I137):DC(J9) DA(I138):DT(J8) DT(I139):DA(J7) DA(I140):DT(J6) DT(I141):DA(J5) DT(I142):DA(J4) DG(I143):DC(J3) DA(I144):DT(J2) DT(I145):DA(J1) chainL (273) HIS333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (274) PHE334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) GLN335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 66 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) HIS336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qilppcrsivrtlhqhklgraswpsvqqglqqsflhtldsyrilqkaapfdrratslawhpthpstvavgskggdimlwnfgikdkptfikgigaggsitglkfnplntnqfyassmegttrlqdfkgnilrvfassdtiniwfcsldvsassrmvvtgdnvgnvillnmdgkelwnlrmhkkkvthvalnpccdwflatasvdqtvkiwdlrqvrgkasflyslphrhpvnaacfspdgarllttdqkseirvysasqwdcplgliphphrHFQHltpikaawhprynlivvgrypdpnfksctpyelrtidvfdgnsgkmmcqlydpessgisslnefnpmgdtlasamgyhiliwsqeeart >6r91_C:Histone-fold; title=CRYO-EM STRUCTURE OF NCP_THF2(-3)-UV-DDB organism=? DNA sequence DA(J1):DT(I145) DT(J2):DA(I144) DC(J3):DG(I143) DA(J4):DT(I142) DA(J5):DT(I141) DT(J6):DA(I140) DA(J7):DT(I139) DT(J8):DA(I138) DC(J9):DG(I137) DC(J10):DG(I136) DA(J11):DT(I135) DC(J12):DG(I134) DC(J13):DG(I133) DT(J14):DA(I132) DG(J15):DC(I131) DC(J16):DG(I130) DA(J17):DT(I129) DG(J18):DC(I128) DA(J19):DT(I127) DT(J20):DA(I126) DT(J21):DA(I125) DC(J22):DG(I124) DT(J23):DA(I123) DA(J24):DT(I122) DC(J25):DG(I121) DC(J26):DG(I120) DA(J27):DT(I119) DA(J28):DT(I118) DA(J29):DT(I117) DA(J30):DT(I116) DG(J31):DC(I115) DT(J32):DA(I114) DG(J33):DC(I113) DT(J34):DA(I112) DA(J35):DT(I111) DT(J36):DA(I110) DT(J37):DA(I109) DT(J38):DA(I108) DG(J39):DC(I107) DG(J40):DC(I106) DA(J41):DT(I105) DA(J42):DT(I104) DA(J43):DT(I103) DC(J44):DG(I102) DT(J45):DA(I101) DG(J46):DC(I100) DC(J47):DG(I99) DT(J48):DA(I98) DC(J49):DG(I97) DC(J50):DG(I96) DA(J51):DT(I95) DT(J52):DA(I94) DC(J53):DG(I93) DA(J54):DT(I92) DA(J55):DT(I91) DA(J56):DT(I90) DA(J57):DT(I89) DG(J58):DC(I88) DG(J59):DC(I87) DC(J60):DG(I86) DA(J61):DT(I85) DT(J62):DA(I84) DG(J63):DC(I83) DT(J64):DA(I82) DT(J65):DA(I81) DC(J66):DG(I80) DA(J67):DT(I79) DG(J68):DC(I78) DC(J69):DG(I77) DT(J70):DA(I76) DG(J71):DC(I75) DA(J72):DT(I74) DA(J73):DT(I73) DC(J74):DG(I72) DC(J75):DG(I71) DA(J76):DT(I70) DG(J77):DC(I69) DC(J78):DG(I68) DT(J79):DA(I67) DG(J80):DC(I66) DA(J81):DT(I65) DA(J82):DT(I64) DC(J83):DG(I63) DA(J84):DT(I62) DT(J85):DA(I61) DG(J86):DC(I60) DC(J87):DG(I59) DC(J88):DG(I58) DT(J89):DA(I57) DT(J90):DA(I56) DT(J91):DA(I55) DT(J92):DA(I54) DG(J93):DC(I53) DA(J94):DT(I52) DT(J95):DA(I51) DG(J96):DC(I50) 3DR(J97):DC(I49) 3DR(J98):DT(I48) DG(J99):DC(I47) DC(J100):DG(I46) DA(J101):DT(I45) DG(J102):DC(I44) DT(J103):DA(I43) DT(J104):DA(I42) DT(J105):DA(I41) DC(J106):DG(I40) DC(J107):DG(I39) DA(J108):DT(I38) DA(J109):DT(I37) DA(J110):DT(I36) DT(J111):DA(I35) DA(J112):DT(I34) DC(J113):DG(I33) DA(J114):DT(I32) DC(J115):DG(I31) DT(J116):DA(I30) DT(J117):DA(I29) DT(J118):DA(I28) DT(J119):DA(I27) DG(J120):DC(I26) DG(J121):DC(I25) DT(J122):DA(I24) DA(J123):DT(I23) DG(J124):DC(I22) DA(J125):DT(I21) DA(J126):DT(I20) DT(J127):DA(I19) DC(J128):DG(I18) DT(J129):DA(I17) DG(J130):DC(I16) DC(J131):DG(I15) DA(J132):DT(I14) DG(J133):DC(I13) DG(J134):DC(I12) DT(J135):DA(I11) DG(J136):DC(I10) DG(J137):DC(I9) DA(J138):DT(I8) DT(J139):DA(I7) DA(J140):DT(I6) DT(J141):DA(I5) DT(J142):DA(I4) DG(J143):DC(I3) DA(J144):DT(I2) DT(J145):DA(I1) chainC ( 2) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk >6r92_C:Histone-fold; title=CRYO-EM STRUCTURE OF NCP-THF2(+1)-UV-DDB CLASS B organism=? DNA sequence DA(I1):DT(J145) DC(I3):DG(J143) DA(I4):DT(J142) DA(I5):DT(J141) DT(I6):DA(J140) DA(I7):DT(J139) DT(I8):DA(J138) DC(I9):DG(J137) DC(I10):DG(J136) DA(I11):DT(J135) DC(I12):DG(J134) DC(I13):DG(J133) DT(I14):DA(J132) DG(I15):DC(J131) DC(I16):DG(J130) DA(I17):DT(J129) DG(I18):DC(J128) DA(I19):DT(J127) DT(I20):DA(J126) DT(I21):DA(J125) DC(I22):DG(J124) DT(I23):DA(J123) DA(I24):DT(J122) DC(I25):DG(J121) DC(I26):DG(J120) DA(I27):DT(J119) DA(I28):DT(J118) DA(I29):DT(J117) DA(I30):DT(J116) DG(I31):DC(J115) DT(I32):DA(J114) DG(I33):DC(J113) DT(I34):DA(J112) DA(I35):DT(J111) DT(I36):DA(J110) DT(I37):DA(J109) DT(I38):DA(J108) DG(I39):DC(J107) DG(I40):DC(J106) DA(I41):DT(J105) DA(I42):DT(J104) DA(I43):DT(J103) DC(I44):DG(J102) DT(I45):DA(J101) DG(I46):DC(J100) DC(I47):DG(J99) DT(I48):DA(J98) DC(I49):DG(J97) DC(I50):DG(J96) DA(I51):DT(J95) DT(I52):3DR(J94) DC(I53):3DR(J93) DA(I54):DT(J92) DA(I55):DT(J91) DA(I56):DT(J90) DA(I57):DT(J89) DG(I58):DC(J88) DG(I59):DC(J87) DC(I60):DG(J86) DA(I61):DT(J85) DT(I62):DA(J84) DG(I63):DC(J83) DT(I64):DA(J82) DT(I65):DA(J81) DC(I66):DG(J80) DA(I67):DT(J79) DG(I68):DC(J78) DC(I69):DG(J77) DT(I70):DA(J76) DG(I71):DC(J75) DG(I72):DC(J74) DT(I73):DA(J73) DT(I74):DA(J72) DC(I75):DG(J71) DA(I76):DT(J70) DG(I77):DC(J69) DC(I78):DG(J68) DT(I79):DA(J67) DG(I80):DC(J66) DA(I81):DT(J65) DA(I82):DT(J64) DC(I83):DG(J63) DA(I84):DT(J62) DT(I85):DA(J61) DG(I86):DC(J60) DC(I87):DG(J59) DC(I88):DG(J58) DT(I89):DA(J57) DT(I90):DA(J56) DT(I91):DA(J55) DT(I92):DA(J54) DG(I93):DC(J53) DA(I94):DT(J52) DT(I95):DA(J51) DG(I96):DC(J50) DG(I97):DC(J49) DA(I98):DT(J48) DG(I99):DC(J47) DC(I100):DG(J46) DA(I101):DT(J45) DG(I102):DC(J44) DT(I103):DA(J43) DT(I104):DA(J42) DT(I105):DA(J41) DC(I106):DG(J40) DC(I107):DG(J39) DA(I108):DT(J38) DA(I109):DT(J37) DA(I110):DT(J36) DT(I111):DA(J35) DA(I112):DT(J34) DC(I113):DG(J33) DA(I114):DT(J32) DC(I115):DG(J31) DT(I116):DA(J30) DT(I117):DA(J29) DT(I118):DA(J28) DT(I119):DA(J27) DG(I120):DC(J26) DG(I121):DC(J25) DT(I122):DA(J24) DA(I123):DT(J23) DG(I124):DC(J22) DA(I125):DT(J21) DA(I126):DT(J20) DT(I127):DA(J19) DC(I128):DG(J18) DT(I129):DA(J17) DG(I130):DC(J16) DC(I131):DG(J15) DA(I132):DT(J14) DG(I133):DC(J13) DG(I134):DC(J12) DT(I135):DA(J11) DG(I136):DC(J10) DG(I137):DC(J9) DA(I138):DT(J8) DT(I139):DA(J7) DA(I140):DT(J6) DT(I141):DA(J5) DT(I142):DA(J4) DG(I143):DC(J3) DA(I144):DT(J2) DT(I145):DA(J1) chainC ( 3) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) SER123 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) HIS124 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkteSHhk >6r93_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF NCP-6-4PP organism=HOMO SAPIENS DNA sequence DA(I1):DT(J145) DT(I2):DA(J144) DC(I3):DG(J143) DA(I4):DT(J142) DA(I5):DT(J141) DT(I6):DA(J140) DA(I7):DT(J139) DT(I8):DA(J138) DC(I9):DG(J137) DC(I10):DG(J136) DA(I11):DT(J135) DC(I12):DG(J134) DC(I13):DG(J133) DT(I14):DA(J132) DG(I15):DC(J131) DC(I16):DG(J130) DA(I17):DT(J129) DG(I18):DC(J128) DA(I19):DT(J127) DT(I20):DA(J126) DT(I21):DA(J125) DC(I22):DG(J124) DT(I23):DA(J123) DA(I24):DT(J122) DC(I25):DG(J121) DC(I26):DG(J120) DA(I27):DT(J119) DA(I28):DT(J118) DA(I29):DT(J117) DA(I30):DT(J116) DG(I31):DC(J115) DT(I32):DA(J114) DG(I33):DC(J113) DT(I34):DA(J112) DA(I35):DT(J111) DT(I36):DA(J110) DT(I37):DA(J109) DT(I38):DA(J108) DG(I39):DC(J107) DG(I40):DC(J106) DA(I41):DT(J105) DA(I42):DT(J104) DA(I43):DT(J103) DC(I44):DG(J102) DT(I45):DA(J101) DG(I46):DC(J100) DC(I47):DG(J99) DT(I48):DA(J98) DC(I49):DG(J97) DC(I52):DA(J94) DC(I53):DG(J93) DA(I54):DT(J92) DA(I55):DT(J91) DA(I56):DT(J90) DA(I57):DT(J89) DG(I58):DC(J88) DG(I59):DC(J87) DC(I60):DG(J86) DA(I61):DT(J85) DT(I62):DA(J84) DG(I63):DC(J83) DT(I64):DA(J82) DT(I65):DA(J81) DC(I66):DG(J80) DA(I67):DT(J79) DG(I68):DC(J78) DC(I69):DG(J77) DT(I70):DA(J76) DG(I71):DC(J75) DG(I72):DC(J74) DT(I73):DA(J73) DT(I74):DA(J72) DC(I75):DG(J71) DA(I76):DT(J70) DG(I77):DC(J69) DC(I78):DG(J68) DT(I79):DA(J67) DG(I80):DC(J66) DA(I81):DT(J65) DA(I82):DT(J64) DC(I83):DG(J63) DA(I84):DT(J62) DT(I85):DA(J61) DG(I86):DC(J60) DC(I87):DG(J59) DC(I88):DG(J58) DT(I89):DA(J57) DT(I90):DA(J56) DT(I91):DA(J55) DT(I92):DA(J54) DG(I93):DC(J53) DA(I94):DT(J52) DT(I95):DA(J51) DG(I96):DC(J50) DG(I97):DC(J49) DA(I98):DT(J48) DG(I99):DC(J47) DC(I100):DG(J46) DA(I101):DT(J45) DG(I102):DC(J44) DT(I103):DA(J43) DT(I104):DA(J42) DT(I105):DA(J41) DC(I106):DG(J40) DC(I107):DG(J39) DA(I108):DT(J38) DA(I109):DT(J37) DA(I110):DT(J36) DT(I111):DA(J35) DA(I112):DT(J34) DC(I113):DG(J33) DA(I114):DT(J32) DC(I115):DG(J31) DT(I116):DA(J30) DT(I117):DA(J29) DT(I118):DA(J28) DT(I119):DA(J27) DG(I120):DC(J26) DG(I121):DC(J25) DT(I122):DA(J24) DA(I123):DT(J23) DG(I124):DC(J22) DA(I125):DT(J21) DA(I126):DT(J20) DT(I127):DA(J19) DC(I128):DG(J18) DT(I129):DA(J17) DG(I130):DC(J16) DC(I131):DG(J15) DA(I132):DT(J14) DG(I133):DC(J13) DG(I134):DC(J12) DT(I135):DA(J11) DG(I136):DC(J10) DG(I137):DC(J9) DA(I138):DT(J8) DT(I139):DA(J7) DA(I140):DT(J6) DT(I141):DA(J5) DT(I142):DA(J4) DG(I143):DC(J3) DA(I144):DT(J2) DT(I145):DA(J1) chainA ( 4) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 29) LEU66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 5) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 5) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ILE40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrDNiqgitkpairrlarrggvkrisgLiyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkte/rkrsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkRstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakRvtimpkdiqlarrirgera/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkrsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6r93_G:Histone-fold; title=CRYO-EM STRUCTURE OF NCP-6-4PP organism=? DNA sequence DA(J1):DT(I145) DT(J2):DA(I144) DC(J3):DG(I143) DA(J4):DT(I142) DA(J5):DT(I141) DT(J6):DA(I140) DA(J7):DT(I139) DT(J8):DA(I138) DC(J9):DG(I137) DC(J10):DG(I136) DA(J11):DT(I135) DC(J12):DG(I134) DC(J13):DG(I133) DT(J14):DA(I132) DG(J15):DC(I131) DC(J16):DG(I130) DA(J17):DT(I129) DG(J18):DC(I128) DA(J19):DT(I127) DT(J20):DA(I126) DT(J21):DA(I125) DC(J22):DG(I124) DT(J23):DA(I123) DA(J24):DT(I122) DC(J25):DG(I121) DC(J26):DG(I120) DA(J27):DT(I119) DA(J28):DT(I118) DA(J29):DT(I117) DA(J30):DT(I116) DG(J31):DC(I115) DT(J32):DA(I114) DG(J33):DC(I113) DT(J34):DA(I112) DA(J35):DT(I111) DT(J36):DA(I110) DT(J37):DA(I109) DT(J38):DA(I108) DG(J39):DC(I107) DG(J40):DC(I106) DA(J41):DT(I105) DA(J42):DT(I104) DA(J43):DT(I103) DC(J44):DG(I102) DT(J45):DA(I101) DG(J46):DC(I100) DC(J47):DG(I99) DT(J48):DA(I98) DC(J49):DG(I97) DC(J50):DG(I96) DA(J51):DT(I95) DT(J52):DA(I94) DC(J53):DG(I93) DA(J54):DT(I92) DA(J55):DT(I91) DA(J56):DT(I90) DA(J57):DT(I89) DG(J58):DC(I88) DG(J59):DC(I87) DC(J60):DG(I86) DA(J61):DT(I85) DT(J62):DA(I84) DG(J63):DC(I83) DT(J64):DA(I82) DT(J65):DA(I81) DC(J66):DG(I80) DA(J67):DT(I79) DG(J68):DC(I78) DC(J69):DG(I77) DT(J70):DA(I76) DG(J71):DC(I75) DA(J72):DT(I74) DA(J73):DT(I73) DC(J74):DG(I72) DC(J75):DG(I71) DA(J76):DT(I70) DG(J77):DC(I69) DC(J78):DG(I68) DT(J79):DA(I67) DG(J80):DC(I66) DA(J81):DT(I65) DA(J82):DT(I64) DC(J83):DG(I63) DA(J84):DT(I62) DT(J85):DA(I61) DG(J86):DC(I60) DC(J87):DG(I59) DC(J88):DG(I58) DT(J89):DA(I57) DT(J90):DA(I56) DT(J91):DA(I55) DT(J92):DA(I54) DG(J93):DA(I51) DA(J94):DA(I50) DG(J97):DC(I49) DA(J98):DT(I48) DG(J99):DC(I47) DC(J100):DG(I46) DA(J101):DT(I45) DG(J102):DC(I44) DT(J103):DA(I43) DT(J104):DA(I42) DT(J105):DA(I41) DC(J106):DG(I40) DC(J107):DG(I39) DA(J108):DT(I38) DA(J109):DT(I37) DA(J110):DT(I36) DT(J111):DA(I35) DA(J112):DT(I34) DC(J113):DG(I33) DA(J114):DT(I32) DC(J115):DG(I31) DT(J116):DA(I30) DT(J117):DA(I29) DT(J118):DA(I28) DT(J119):DA(I27) DG(J120):DC(I26) DG(J121):DC(I25) DT(J122):DA(I24) DA(J123):DT(I23) DG(J124):DC(I22) DA(J125):DT(I21) DA(J126):DT(I20) DT(J127):DA(I19) DC(J128):DG(I18) DT(J129):DA(I17) DG(J130):DC(I16) DC(J131):DG(I15) DA(J132):DT(I14) DG(J133):DC(I13) DG(J134):DC(I12) DT(J135):DA(I11) DG(J136):DC(I10) DG(J137):DC(I9) DA(J138):DT(I8) DT(J139):DA(I7) DA(J140):DT(I6) DT(J141):DA(I5) DT(J142):DA(I4) DG(J143):DC(I3) DA(J144):DT(I2) DT(J145):DA(I1) chainG ( 1) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Rakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >6r94_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF NCP_THF2(-3) organism=HOMO SAPIENS DNA sequence DA(I1):DT(J145) DT(I2):DA(J144) DC(I3):DG(J143) DA(I4):DT(J142) DA(I5):DT(J141) DT(I6):DA(J140) DA(I7):DT(J139) DT(I8):DA(J138) DC(I9):DG(J137) DC(I10):DG(J136) DA(I11):DT(J135) DC(I12):DG(J134) DC(I13):DG(J133) DT(I14):DA(J132) DG(I15):DC(J131) DC(I16):DG(J130) DA(I17):DT(J129) DG(I18):DC(J128) DA(I19):DT(J127) DT(I20):DA(J126) DT(I21):DA(J125) DC(I22):DG(J124) DT(I23):DA(J123) DA(I24):DT(J122) DC(I25):DG(J121) DC(I26):DG(J120) DA(I27):DT(J119) DA(I28):DT(J118) DA(I29):DT(J117) DA(I30):DT(J116) DG(I31):DC(J115) DT(I32):DA(J114) DG(I33):DC(J113) DT(I34):DA(J112) DA(I35):DT(J111) DT(I36):DA(J110) DT(I37):DA(J109) DT(I38):DA(J108) DG(I39):DC(J107) DG(I40):DC(J106) DA(I41):DT(J105) DA(I42):DT(J104) DA(I43):DT(J103) DC(I44):DG(J102) DT(I45):DA(J101) DG(I46):DC(J100) DC(I47):DG(J99) DT(I48):3DR(J98) DC(I49):3DR(J97) DC(I50):DG(J96) DA(I51):DT(J95) DT(I52):DA(J94) DC(I53):DG(J93) DA(I54):DT(J92) DA(I55):DT(J91) DA(I56):DT(J90) DA(I57):DT(J89) DG(I58):DC(J88) DG(I59):DC(J87) DC(I60):DG(J86) DA(I61):DT(J85) DT(I62):DA(J84) DG(I63):DC(J83) DT(I64):DA(J82) DT(I65):DA(J81) DC(I66):DG(J80) DA(I67):DT(J79) DG(I68):DC(J78) DC(I69):DG(J77) DT(I70):DA(J76) DG(I71):DC(J75) DG(I72):DC(J74) DT(I73):DA(J73) DT(I74):DA(J72) DC(I75):DG(J71) DA(I76):DT(J70) DG(I77):DC(J69) DC(I78):DG(J68) DT(I79):DA(J67) DG(I80):DC(J66) DA(I81):DT(J65) DA(I82):DT(J64) DC(I83):DG(J63) DA(I84):DT(J62) DT(I85):DA(J61) DG(I86):DC(J60) DC(I87):DG(J59) DC(I88):DG(J58) DT(I89):DA(J57) DT(I90):DA(J56) DT(I91):DA(J55) DT(I92):DA(J54) DG(I93):DC(J53) DA(I94):DT(J52) DT(I95):DA(J51) DG(I96):DC(J50) DG(I97):DC(J49) DA(I98):DT(J48) DG(I99):DC(J47) DC(I100):DG(J46) DA(I101):DT(J45) DG(I102):DC(J44) DT(I103):DA(J43) DT(I104):DA(J42) DT(I105):DA(J41) DC(I106):DG(J40) DC(I107):DG(J39) DA(I108):DT(J38) DA(I109):DT(J37) DA(I110):DT(J36) DT(I111):DA(J35) DA(I112):DT(J34) DC(I113):DG(J33) DA(I114):DT(J32) DC(I115):DG(J31) DT(I116):DA(J30) DT(I117):DA(J29) DT(I118):DA(J28) DT(I119):DA(J27) DG(I120):DC(J26) DG(I121):DC(J25) DT(I122):DA(J24) DA(I123):DT(J23) DG(I124):DC(J22) DA(I125):DT(J21) DA(I126):DT(J20) DT(I127):DA(J19) DC(I128):DG(J18) DT(I129):DA(J17) DG(I130):DC(J16) DC(I131):DG(J15) DA(I132):DT(J14) DG(I133):DC(J13) DG(I134):DC(J12) DT(I135):DA(J11) DG(I136):DC(J10) DG(I137):DC(J9) DA(I138):DT(J8) DT(I139):DA(J7) DA(I140):DT(J6) DT(I141):DA(J5) DT(I142):DA(J4) DG(I143):DC(J3) DA(I144):DT(J2) DT(I145):DA(J1) chainA ( 5) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 6) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 49) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 27) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 4) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 5) HIS40 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 4) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) LYS126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 chainH ( 8) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vkkpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/gkaRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkktes/rkrSrkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/vkkpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/gkaRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkteshhK/gkkrkrsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6r94_E:Histone-fold; title=CRYO-EM STRUCTURE OF NCP_THF2(-3) organism=? DNA sequence DA(I1):DT(J145) DT(I2):DA(J144) DC(I3):DG(J143) DA(I4):DT(J142) DA(I5):DT(J141) DT(I6):DA(J140) DA(I7):DT(J139) DT(I8):DA(J138) DC(I9):DG(J137) DC(I10):DG(J136) DA(I11):DT(J135) DC(I12):DG(J134) DC(I13):DG(J133) DT(I14):DA(J132) DG(I15):DC(J131) DC(I16):DG(J130) DA(I17):DT(J129) DG(I18):DC(J128) DA(I19):DT(J127) DT(I20):DA(J126) DT(I21):DA(J125) DC(I22):DG(J124) DT(I23):DA(J123) DA(I24):DT(J122) DC(I25):DG(J121) DC(I26):DG(J120) DA(I27):DT(J119) DA(I28):DT(J118) DA(I29):DT(J117) DA(I30):DT(J116) DG(I31):DC(J115) DT(I32):DA(J114) DG(I33):DC(J113) DT(I34):DA(J112) DA(I35):DT(J111) DT(I36):DA(J110) DT(I37):DA(J109) DT(I38):DA(J108) DG(I39):DC(J107) DG(I40):DC(J106) DA(I41):DT(J105) DA(I42):DT(J104) DA(I43):DT(J103) DC(I44):DG(J102) DT(I45):DA(J101) DG(I46):DC(J100) DC(I47):DG(J99) DT(I48):3DR(J98) DC(I49):3DR(J97) DC(I50):DG(J96) DA(I51):DT(J95) DT(I52):DA(J94) DC(I53):DG(J93) DA(I54):DT(J92) DA(I55):DT(J91) DA(I56):DT(J90) DA(I57):DT(J89) DG(I58):DC(J88) DG(I59):DC(J87) DC(I60):DG(J86) DA(I61):DT(J85) DT(I62):DA(J84) DG(I63):DC(J83) DT(I64):DA(J82) DT(I65):DA(J81) DC(I66):DG(J80) DA(I67):DT(J79) DG(I68):DC(J78) DC(I69):DG(J77) DT(I70):DA(J76) DG(I71):DC(J75) DG(I72):DC(J74) DT(I73):DA(J73) DT(I74):DA(J72) DC(I75):DG(J71) DA(I76):DT(J70) DG(I77):DC(J69) DC(I78):DG(J68) DT(I79):DA(J67) DG(I80):DC(J66) DA(I81):DT(J65) DA(I82):DT(J64) DC(I83):DG(J63) DA(I84):DT(J62) DT(I85):DA(J61) DG(I86):DC(J60) DC(I87):DG(J59) DC(I88):DG(J58) DT(I89):DA(J57) DT(I90):DA(J56) DT(I91):DA(J55) DT(I92):DA(J54) DG(I93):DC(J53) DA(I94):DT(J52) DT(I95):DA(J51) DG(I96):DC(J50) DG(I97):DC(J49) DA(I98):DT(J48) DG(I99):DC(J47) DC(I100):DG(J46) DA(I101):DT(J45) DG(I102):DC(J44) DT(I103):DA(J43) DT(I104):DA(J42) DT(I105):DA(J41) DC(I106):DG(J40) DC(I107):DG(J39) DA(I108):DT(J38) DA(I109):DT(J37) DA(I110):DT(J36) DT(I111):DA(J35) DA(I112):DT(J34) DC(I113):DG(J33) DA(I114):DT(J32) DC(I115):DG(J31) DT(I116):DA(J30) DT(I117):DA(J29) DT(I118):DA(J28) DT(I119):DA(J27) DG(I120):DC(J26) DG(I121):DC(J25) DT(I122):DA(J24) DA(I123):DT(J23) DG(I124):DC(J22) DA(I125):DT(J21) DA(I126):DT(J20) DT(I127):DA(J19) DC(I128):DG(J18) DT(I129):DA(J17) DG(I130):DC(J16) DC(I131):DG(J15) DA(I132):DT(J14) DG(I133):DC(J13) DG(I134):DC(J12) DT(I135):DA(J11) DG(I136):DC(J10) DG(I137):DC(J9) DA(I138):DT(J8) DT(I139):DA(J7) DA(I140):DT(J6) DT(I141):DA(J5) DT(I142):DA(J4) DG(I143):DC(J3) DA(I144):DT(J2) DT(I145):DA(J1) chainE ( 5) HIS40 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vkkpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >6rar_I:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=PMAR-LIG_PRES3-MN organism=Prochlorococcus marinus str. MIT 9302 DNA sequence DT(B1):DA(D42) DT(B2):DA(D41) DC(B3):DG(D40) DC(B4):DG(D39) DG(B5):DC(D38) DA(B6):DT(D37) DC(B7):DA(D36) DA(B8):DT(D35) DG(B9):DC(D34) DT(B10):DA(D33) DG(B11):DC(D32) DG(B12):DC(C31) DG(B13):OMC(C30) DG(B14):DC(C29) DT(B15):DA(C28) DC(B16):DG(C27) DG(B17):DC(C26) DC(B18):DG(C25) DA(B19):DT(C24) DA(B20):DT(C23) DT(B21):DA(C22) chainI (167) VAL171 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (222) PHE226 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (226) MET230 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 (381) SER385 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (423) PHE427 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 prot.sequence elfkeeiihqlelhpsrldkekiiseamedgiddffegirmaldplvtfgvkivpekeseksqnflwedfrklanklmqreltghaardailtamesatkeewngfyrrvlikdlrcgvsektinkiakkfpkyaipifscplahdsanhekkmigkkqieikldgvrvltiirqnkvemfsrngkqfhnfghiileienvlkedpapydlvldgevmsanfqdlMkqvhrkdgkqtkdavlhlfdlcplenfqkgrwntkqtarsllvkkwvakhslllkhiqtlewenvdldtiqgqkrfvelnksaveggyegvmikdpdgmyeckrthswlkakpfievtlkvvsveegtgrnkgrlgailvegeddgyeyslscgSgfsdiqreeywskrkhllgqlveiradaktkskdgvafslrFprfkcfrgf >6ras_I:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=PMAR-LIG_PRE. organism=Prochlorococcus marinus str. MIT 9302 DNA sequence DT(B1):DA(D42) DT(B2):DA(D41) DC(B3):DG(D40) DC(B4):DG(D39) DG(B5):DC(D38) DA(B6):DT(D37) DC(B7):DA(D36) DA(B8):DT(D35) DG(B9):DC(D34) DT(B10):DA(D33) DG(B11):DC(D32) DG(B12):DC(C31) DG(B13):OMC(C30) DG(B14):DC(C29) DT(B15):DA(C28) DC(B16):DG(C27) DG(B17):DC(C26) DC(B18):DG(C25) DA(B19):DT(C24) DA(B20):DT(C23) DT(B21):DA(C22) chainI (167) VAL171 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (222) PHE226 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (226) MET230 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 (381) SER385 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 (423) PHE427 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 prot.sequence elfkeeiihqlelhpsrldkekiiseamedgiddffegirmaldplvtfgvkivpekeseksqnflwedfrklanklmqreltghaardailtamesatkeewngfyrrvlikdlacgvsektinkiakkfpkyaipifscplahdsanhekkmigkkqieikldgvrvltiirqnkvemfsrngkqfhnfghiileienvlkedpapydlvldgevmsanfqdlMkqvhrkdgkqtkdavlhlfdlcplenfqkgrwntkqtarsllvkkwvakhslllkhiqtlewenvdldtiqgqkrfvelnksaveggyegvmikdpdgmyeckrthswlkakpfievtlkvvsveegtgrnkgrlgailvegeddgyeyslscgSgfsdiqreeywskrkhllgqlveiradaktkskdgvafslrFprfkcfrgfk >6rau_I:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=POSTS3_PMAR_LIG4_WT organism=Prochlorococcus marinus DNA sequence DA(C22):DT(B21) DT(C23):DA(B20) DT(C24):DA(B19) DG(C25):DC(B18) DC(C26):DG(B17) DG(C27):DC(B16) DA(C28):DT(B15) DC(C29):DG(B14) DC(C30):DG(B13) DC(C31):DG(B12) DC(C32):DG(B11) DA(C33):DT(B10) DC(C34):DG(B9) DT(C35):DA(B8) DA(C36):DC(B7) DT(C37):DA(B6) DC(C38):DG(B5) DG(C39):DC(B4) DG(C40):DC(B3) DA(C41):DT(B2) DA(C42):DT(B1) chainI (183) ARG187 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (222) PHE226 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (381) SER385 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 (423) PHE427 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 prot.sequence elfkeeiihqlelhpsrldkekiiseamedgiddffegirmaldplvtfgvkivpekeseksqnflwedfrklanklmqreltghaardailtamesatkeewngfyrrvlikdlrcgvsektinkiakkfpkyaipifscplahdsanhekkmigkkqieikldgvrvltiirqnkvemfsRngkqfhnfghiileienvlkedpapydlvldgevmsanFqdlmkqvhrkdgkqtkdavlhlfdlcplenfqkgrwntkqtarsllvkkwvakhslllkhiqtlewenvdldtiqgqkrfvelnksaveggyegvmikdpdgmyeckrthswlkakpfievtlkvvsveegtgrnkgrlgailvegeddgyeyslscgSgfsdiqreeywskrkhllgqlveiradaktkskdgvafslrFprfkcfrgf >6raw_2356: title=D. MELANOGASTER CMG-DNA, STATE 1A organism=DROSOPHILA MELANOGASTER DNA sequence DA(F-11) DT(F-10) DC(F-9) DG(F-8) DA(F-7) DT(F-6) DC(F-5) DG(F-4) DA(F-3) DT(F-2) DC(F-1) DG(F0) DA(F1) DT(F2) DT(F3) DT(F4) DT(F5) DT(F6) DT(F7) DT(F8) DT(F9) DT(F10) DT(F11) DT(F12) DT(F13) DT(F14) chain2 (369) ARG546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 chain3 (360) VAL377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chain5 (346) LYS417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (351) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 chain6 (382) ARG427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 prot.sequence lgprteianrfqsflrtfvdergaytyrdrirrmceqnmssfvvsytdlankehvlayflpeapfqmleifdkvakdmvlsifptyervtteihvriselplieelrtfrklhlnqlvrtlgvvtattgvlpqlsvikydcvkcgyvlgpfnteikpgscpecqstgpfsinmeqtlyrnyqkitlqespgripagriprskdvilladlcdqckpgdelevtgiytnnydgslntdqgfpvfatviianhvvvkdskqvvqsltdediatiqklskdprivervvasmapsiyghdyikralalalfggesknpgekhkvrgdinllicgdpgtaksqflkytekvapravfttgqgasavgltayvRrnpvsrewtleagalvladqgvclidefdkmndqdrtsiheameqqsisiskagivtslqarctviaaanpiggrydpsmtfsenvnlsepilsrfdvlcvvkdefdpmqdqqlakfvvhshmkhheipqdllrqyivyakenirpkltnidedkiakmyaqlrqesfatgslpitvrhiesvirmseaharmhlrenvmeadvsmairmmlesfieaqkfsvmkkmrstfqky/egeqfikdiqreyvdflddeedqgiyaghvkdmiaekskrlivnvndlkrknpqralgllsnaadeqlafgralkeyastvdpgyakmhedlfvgfeggnrhvtprsltsiylgnmvcvegivtkvslirpkvvrsvhycpntrkvmerkytdltsfeavpyptkdedgnlleteyglsvykdhqtltiqempekapagqlprsvdivcdddlvdrckpgdrvqivgsyrclpgkrgsgtfrtvllannisllskesnldisredimlckklaknndifellskslapsighvkqailclllggvekilpngtrlrgdinvllgdpsaksqllryvlntapraipttgrgssgvgltaaVttdqetgerrleagamvladrgvvcidefdkmsdidrtaihevmeqgrvtiskagihaslnarcsvlaaanpvygrydqyktpmeniglqdsllsrfdllfvmldvidsdvdqmisdhvvrmhallhgksrqrhekilsvefmrkyihiakcmkpklgeqaceaianeysrlrsqeavetdvartqpitartletlirlstahararmsksvtiddahaaielvq/inlqavkkkykefirtfneenffykyrdtlkrnylngryfleiemedlvgfdetladklnkqptehleifeeaarevadeitaprpeheehmhdiqillssnanptnirqlksdcvsklvkiagiivaasgisakatrmsyalprkcnpkcpldpffimpdkckcvdfqtlklqelpdfvpqgeiprhlqlfcdrslcervvpgnrvliqgiysirkgvrapymrvvgitvdsegagaisrysnitsdeeehfrrmaasgdiyerlsqslapsifgsrdikkaitcmlfggsrkrlpdglcrrgdinvlllgdpgtaksqllkfvekvpiavytsgkggltasvmKdpqtRnfvmegamvladggvvcidefdkmreddrvaiheameqqtisiakagitttlnsrcsvlaaansifgrwddtkgeenidfmptilsrfdmifivkdihdesrditlakhiinvhlssnksapsepaegeislstfkkyihycrthcgprlseaageklksryvlmrsgagqqekasdkritvrqleaviriseslakirlqpfatdehvnealrlfqvstldaam/vkdevgiraqklfqdfleefkedgeikytrpaaslespdrctlevsfedvekydqnlataiieeyyhiypflcqsvsnyvkdriglktqkdcyvaftevptrhkvrdlttskigtlirisgqvvrthpvhpelvsgvfmcldcqteirnveqqfkftnpticrnpvcsnrkrfmldvekslfldfqkiriqetqaelprgcipraveiilrselvetvqagdrydftgtlivvplagvgtraenlnyrmaflacsvqattarfggtdtaedmkkqmtdaewhkiyemskdrnlyqnlisslfpsiygndevkrgillqqfggvaktttektslrgdinvcivgdpstaksqflkqvsdfspraiytsgkassaagltaavvRdeesfdfvieagalmladngiccidefdkmdqrdqvaiheameqqtisiaragvratlnartsilaaanpingrydrskslqqniqlsapimsrfdlffilvdecnevvdyaiarkivdlhsnieesveraytreevlryvtfarqfkpvisqeaghmlvenyghlrqrdtgritvrqlesmirlseamaklecsnrvlerhvkeafrllnksiirveq >6raw_6:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=D. MELANOGASTER CMG-DNA, STATE 1A organism=DROSOPHILA MELANOGASTER DNA sequence DA(F-11) DT(F-10) DC(F-9) DG(F-8) DA(F-7) DT(F-6) DC(F-5) DG(F-4) DA(F-3) DT(F-2) DC(F-1) DG(F0) DA(F1) DT(F2) DT(F3) DT(F4) DT(F5) DT(F6) DT(F7) DT(F8) DT(F9) DT(F10) DT(F11) DT(F12) DT(F13) DT(F14) chain6 (382) ARG427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 prot.sequence vkdevgiraqklfqdfleefkedgeikytrpaaslespdrctlevsfedvekydqnlataiieeyyhiypflcqsvsnyvkdriglktqkdcyvaftevptrhkvrdlttskigtlirisgqvvrthpvhpelvsgvfmcldcqteirnveqqfkftnpticrnpvcsnrkrfmldvekslfldfqkiriqetqaelprgcipraveiilrselvetvqagdrydftgtlivvplagvgtraenlnyrmaflacsvqattarfggtdtaedmkkqmtdaewhkiyemskdrnlyqnlisslfpsiygndevkrgillqqfggvaktttektslrgdinvcivgdpstaksqflkqvsdfspraiytsgkassaagltaavvRdeesfdfvieagalmladngiccidefdkmdqrdqvaiheameqqtisiaragvratlnartsilaaanpingrydrskslqqniqlsapimsrfdlffilvdecnevvdyaiarkivdlhsnieesveraytreevlryvtfarqfkpvisqeaghmlvenyghlrqrdtgritvrqlesmirlseamaklecsnrvlerhvkeafrllnksiirveq >6rax_2357: title=D. MELANOGASTER CMG-DNA, STATE 1B organism=DROSOPHILA MELANOGASTER DNA sequence DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X6) DT(X5) DT(X4) DT(X3) DT(X2) DT(X1) DG(X0) DA(X-7) DT(X-6) DC(X-5) DG(X-4) DA(X-3) DT(X-2) DC(X-1):DG(X0) chain2 (371) ARG546 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain3 (366) VAL377 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) THR379 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (369) ASP380 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 chain5 (386) LYS417 0 0 0 0 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) ARG422 0 0 0 0 0 0 17 5 0 0 0 0 0 0 0 0 0 0 0 0 (416) ARG448 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain7 (275) PHE285 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 (277) GLN287 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence lgprteianrfqsflrtfvdergaytyrdrirrmceqnmssfvvsytdlankehvlayflpeapfqmleifdkvakdmvlsifptyervtteihvriselplieelrtfrklhlnqlvrtlgvvtattgvlpqlsvikydcvkcgyvlgpfvqsqnteikpgscpecqstgpfsinmeqtlyrnyqkitlqespgripagriprskdvilladlcdqckpgdelevtgiytnnydgslntdqgfpvfatviianhvvvkdskqvvqsltdediatiqklskdprivervvasmapsiyghdyikralalalfggesknpgekhkvrgdinllicgdpgtaksqflkytekvapravfttgqgasavglyvRrnpvsrewtleagalvladqgvclidefdkmndqdrtsiheameqqsisiskagivtslqarctviaaanpiggrydpsmtfsenvnlsepilsrfdvlcvvkdefdpmqdqqlakfvvhshmkhheipqdllrqyivyakenirpkltnidedkiakmyaqlrqesfatgslpitvrhiesvirmseaharmhlrenvmeadvsmairmmlesfieaqkfsvmkkmrstfqky/egeqfikdiqreyvdflddeedqgiyaghvkdmiaekskrlivnvndlkrknpqralgllsnaadeqlafgralkeyastvdpgyakmhedlfvgfegcfgnrhvtprsltsiylgnmvcvegivtkvslirpkvvrsvhycpntrkvmerkytdltsfeavpsgaayptkdedgnlleteyglsvykdhqtltiqempekapagqlprsvdivcdddlvdrckpgdrvqivgsyrclpgkrgsgtfrtvllannisllskesnldisredimlckklaknndifellskslapsighvkqailclllggvekilpngtrlrgdinvllgdpsaksqllryvlntapraipttgrgssgvgltaaVtTDqetgerrleagamvladrgvvcidefdkmsdidrtaihevmeqgrvtiskagihaslnarcsvlaaanpvygrydqyktpmeniglqdsllsrfdllfvmldvidsdvdqmisdhvvrmhryrnpkeadslsfvssseekkdtevyekydallhgksrqrhekilsvefmrkyihiakcmkpklgeqaceaianeysrlrsqeavetdvartqpitartletlirlstahararmsksvtiddahaaielvqfayf/nqqdaqinlqavkkkykefirtfneenffykyrdtlkrnylngryfleiemedlvgfdetladklnkqptehleifeeaarevadeitaprpeheehmhdiqillssnanptnirqlksdcvsklvkiagiivaasgisakatrmsiqclscstvipnlyalprkcnteqagrpkcpldpffimpdkckcvdfqtlklqelpdfvpqgeiprhlqlfcdrslcervvpgnrvliqgiysirkvgkpsrrdgrekavvgvrapymrvvgitvdsegagaisrysnitsdeeehfrrmaasgdiyerlsqslapsifgsrdikkaitcmlfggsrkrlpdglcrrgdinvlllgdpgtaksqllkfvekvpiavytsgkgsstasvmKdpqtRnfvmegamvladggvvcidefdkmReddrvaiheameqqtisiakagitttlnsrcsvlaaansifgrwddtkgeenidfmptilsrfdmifivkdihdesrditlakhiinvhlssnksapsepaegeislstfkkyihycrthcgprlseaageklksryvlmrsgagqqekasdkrlsipitvrqleaviriseslakirlqpfatdehvnealrlfqvstldaam/rrdyaqdresiktflsefckcdddgkkefvygsqlvklahreqvlitidlddlaefneslaeavvdncrrytsifsdviaellpsevhakdaldvyiehrlmmeqrdernsfpselmkrfevgfkplstekahsirevkaqhigklvtvrgivtrctevkpmmvvatytcdrcgsetyqpvnslsftpvhdcpsddcrvnkaggrlylqtrgskfvkfqevkmqehsdqvpvghiprsmtimcrgevtrmaqpgdhivvsgvflplmrtgFaQmiqgllsetflqahriicinkndeisdkdaeltpeeleelaqddfyerlatslapeiyghldvkkalllllvggvdkrpdgmkirgniniclmgdpgvaksqllgyisrlavrsqyttgrgssgvgltaavmkdpltgemtleggalvladqgvccidefdkmadqdrtaihevmeqqtisiakagimttlnarvsilaaanpafgrynprrtveqniqlpaallsrfdllwliqdkpdrdndlrlakhityvhshskqpptrvkaldmnlmrryinlckrknptipdeltdyivgayvelrrearnqkdmtftsarnllgilrlstalarlrlsdsvekddvaealrllemskdslnq >6rax_2:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=D. MELANOGASTER CMG-DNA, STATE 1B organism=DROSOPHILA MELANOGASTER DNA sequence DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X6) DT(X5) DT(X4) DT(X3) DT(X2) DT(X1) DG(X0) DA(X-7) DT(X-6) DC(X-5) DG(X-4) DA(X-3) DT(X-2) DC(X-1):DG(X0) chain2 (371) ARG546 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lgprteianrfqsflrtfvdergaytyrdrirrmceqnmssfvvsytdlankehvlayflpeapfqmleifdkvakdmvlsifptyervtteihvriselplieelrtfrklhlnqlvrtlgvvtattgvlpqlsvikydcvkcgyvlgpfvqsqnteikpgscpecqstgpfsinmeqtlyrnyqkitlqespgripagriprskdvilladlcdqckpgdelevtgiytnnydgslntdqgfpvfatviianhvvvkdskqvvqsltdediatiqklskdprivervvasmapsiyghdyikralalalfggesknpgekhkvrgdinllicgdpgtaksqflkytekvapravfttgqgasavglyvRrnpvsrewtleagalvladqgvclidefdkmndqdrtsiheameqqsisiskagivtslqarctviaaanpiggrydpsmtfsenvnlsepilsrfdvlcvvkdefdpmqdqqlakfvvhshmkhheipqdllrqyivyakenirpkltnidedkiakmyaqlrqesfatgslpitvrhiesvirmseaharmhlrenvmeadvsmairmmlesfieaqkfsvmkkmrstfqky >6ray_234567:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=D. MELANOGASTER CMG-DNA, STATE 2A organism=DROSOPHILA MELANOGASTER DNA sequence DA(X26) DT(X27) DT(X28) DT(X29) DT(X30) DT(X31) DT(X32) DT(X33) DT(X34) DT(X35) DT(X36) DT(X37) DT(X38) chain3 chain4 (389) TYR548 0 0 0 0 0 0 1 9 0 0 0 0 0 chain7 (362) ASP421 0 0 0 0 0 0 0 0 0 3 0 0 0 (412) LYS471 0 0 0 0 0 0 0 0 0 0 1 0 0 chain6 chain5 chain2 (373) GLU553 0 0 0 5 0 0 0 0 0 0 0 0 0 (374) TRP554 0 0 8 0 0 0 0 0 0 0 0 0 0 prot.sequence lgprteianrfqsflrtfvdergaytyrdrirrmceqnmssfvvsytdlankehvlayflpeapfqmleifdkvakdmvlsifptyervihvrisplieelrtfrklhlnqlvrtlgvvtattgvlpqlsvikydcvkcgyvlgpfvqsqnteikpgscpecqstgpfsinmeqtlyrnyqkitlqespgripagriprskdvilladlcdqckpgdelevtgiytnnydgslntdqgfpvfatviianhvvvkdskqvvqsltdediatiqklskdprivervvasmapsiyghdyikralalalfggesknpgekhkvrgdinllicgdpgtaksqflkytekvapravfttgqgasavglyvrrnpvsrEWtleagalvladqgvclidefdkmndqdrtsiheameqqsisiskagivtslqarctviaaanpiggrydpsmtfsenvnlsepilsrfdvlcvvkdefdpmqdqqlakfvvhshmkhheipqdllrqyivyakenirpkltnidedkiakmyaqlrqesfatgslpitvrhiesvirmseaharmhlrenvmeadvsmairmmlesfieaqkfsvmkkmrstfqky/egeqfikdiqreyvdflddeedqgiyaghvkdmiaekskrlivnvndlkrknpqralgllsnaadeqlafgralkeyastvdpgyakmhedlfvgfrhvtprsltsiylgnmvcvegivtkvslirpkvvrsvhycpntrkvmerkytdltsfeavpsgaayptkdedgnlleteyglsvykdhqtltiqempekapagqlprsvdivcdddlvdrckpgdrvqivgsyrclpgkrgsgtfrtvllannisllskesldisredimlckklaknndifellskslapsighvkqailclllggvekilpngtrlrgdinvllgdpsaksqllryvlntapraipttgrgssgvgltaavttdqetgerrleaGAmvladrgvvcidefdkmsdidrtaihevmeqgrvtiskagihaslnarcsvlaaanpvygrydqyktpmeniglqdsllsrfdllfvmldvidsdvdqmisdhvvrmhryrnpkeyekydallhgksrqrhekilsvefmrkyihiakcmkpklgeqaceaianeysrlrsqeavetdvartqpitartletlirlstahararmsksvtiddahaaielvqfayf/tnvvvsqckskfksfimrfidpsaeqdeisenidvnqplylqkleeihtleepylnlncahlktfdqdlyrqlicypqevipgfdmainemfferypaallehqiqfnadktrnmrslnpedmdqlisisgmvirssnvipemreaffscnicsfsttvevdrgrinqptlctncntnhcfrlihnrseftdkqlvklqespddmaagqtphnvllyahndlvdkvqpgdrvtvtgiyratplktgglsssvksvykthvdvvhfrkvdnkrlyedeegkdhifppervellqllakkpdiydrlaraiapsiyenddikkgillqlfggtkkkhatlgrqnfrseihlllcgdpgtsksqmlqyvfnlvprsqytsgrgssavgltaYvtkdpetrqlvlqtgalvladngvccidefdkmndstrsvlhevmeqqtlsiakagiicqlnartsilaaanpaesqwnkrkniidnvqlphtllsrfdliflvldpqdeifdkrlashlvslyyvtrheeedtmfdmsvlrdyiayarehlsptlsdeaqqrliqayvdmrkvgagrgqisayprqleslirlseahakvrlsnqvelldveeawrlhrealkqsat/nqqdaqinlqavkkkykefirtfneenffykyrdtlkrnylngryfleiemedlvgfdetladklnkqptehleifeeaarevadeitaprpeheehmhdiqillsanptnirqlksdcvsklvkiagiivaasgisakatrmsiqclscstvipnlyalkcnteqagrpkcpldpffimpdkckcvdfqtlklqelpdfvpqgeiprhlqlfcdrslcervvpgnrvliqgiysirkvgkekavvgvrapymrvvgitvdsegagaisrytsdeeehfrrmaasgdiyerlsqslapsifgsrdikkaitcmlfggsrkrlpdglcrrgdinvlllgdpgtaksqllkfvekvpiavytsgkgsstasvmkdpqtrnfvmeggamvlAdggvvcidefdkmreddrvaiheameqqtisiakagitttlnsrcsvlaaansifgrwddtkgeenidfmptilsrfdmifivkdihdesrditlakhiinvhlssnksapsepaegeislstfkkyihycrthcgprlseapitvrqleviriseslakirlqpfatdehvnealrlfqvstldaam/vkdevgiraqklfqdflerpaaslespdrctlevsfedvekydqnlataiieeyyhiypflcqsvsnyvkdriglktqkdcyvaftevptrhkvrdlttskigtlirisgqvvrthpvhpeirnveqqfkftnpticrnpvcsnrkrfmldvekslfldfqkiriqetqaelprgcipraveiilrselvetvqagdrydftgtlivvpdvsvlagvgtraenssrhkpgmrelnyrmaflacsvqattartdlpmsevtaedmkkqmtdaewhkiyemskdrnlyqnlisslfpsiygndevkrgillqqfggvaktttektslrgdinvcivgdpstaksqflkqvsdfspraiytsgkassaagltaavvrdeesfdfvieagalMladngiccidefdkmdqrdqvaiheameqqtisiaragvratlnartsilaaanpingrydrskslqqniqlsapimsrfdlffilvdecnevvdyaiarkivdlhsnieesveraytreevlryvtfarqfkpvisqeaghmlvenyghlrqrdtgtsgrstwritvrqlesmirlseamaklecsnrvlerhvkeafrllnksiirveq/rrdyaqdresiktflsefckcdddgkkefvygsqlvklahreqvlitidlddlaefneslaeavvdncrrytsifsdviaellpsaldvyiehrlmmeqrdernsfpselmkrfevgfkpirevkaqhigklvtvrvtrctevkpmmvvatetyqpvnslsftpvhdcpsddcrvnkaggrlylqtrgskfvkfqevkqehsdqvpvghiprstimcrgevtrmaqpgdhivvsflplmgllflqahriicinkndeisdkdpeeleelaqddfyerlatslapeiyghldvkkalllllvggvdkrpdgmkirgniniclmgdpgvaksqllgyisrlavrsqyttgrgssgvgltaavmDpltgemtleggalvladqgvccidefdkmadqdrtaihevmeqqtisiaKagimttlnarvsilaaanpafgrynprrtveqniqlpaallsrfdllwliqdkpdrdndlrlakhityvhshskqpptrvkaldmnlmrryinlckrknptipdeltdyivgayvelrrearnqkdmtftsarnllgilrlstalarlrlsdsvekddvaealrllemskdslnq >6ray_2:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=D. MELANOGASTER CMG-DNA, STATE 2A organism=DROSOPHILA MELANOGASTER DNA sequence DA(X26) DT(X27) DT(X28) DT(X29) DT(X30) DT(X31) DT(X32) DT(X33) DT(X34) DT(X35) DT(X36) DT(X37) DT(X38) chain2 (373) GLU553 0 0 0 5 0 0 0 0 0 0 0 0 0 (374) TRP554 0 0 8 0 0 0 0 0 0 0 0 0 0 prot.sequence lgprteianrfqsflrtfvdergaytyrdrirrmceqnmssfvvsytdlankehvlayflpeapfqmleifdkvakdmvlsifptyervihvrisplieelrtfrklhlnqlvrtlgvvtattgvlpqlsvikydcvkcgyvlgpfvqsqnteikpgscpecqstgpfsinmeqtlyrnyqkitlqespgripagriprskdvilladlcdqckpgdelevtgiytnnydgslntdqgfpvfatviianhvvvkdskqvvqsltdediatiqklskdprivervvasmapsiyghdyikralalalfggesknpgekhkvrgdinllicgdpgtaksqflkytekvapravfttgqgasavglyvrrnpvsrEWtleagalvladqgvclidefdkmndqdrtsiheameqqsisiskagivtslqarctviaaanpiggrydpsmtfsenvnlsepilsrfdvlcvvkdefdpmqdqqlakfvvhshmkhheipqdllrqyivyakenirpkltnidedkiakmyaqlrqesfatgslpitvrhiesvirmseaharmhlrenvmeadvsmairmmlesfieaqkfsvmkkmrstfqky >6raz_234567:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=D. MELANOGASTER CMG-DNA, STATE 2B organism=DROSOPHILA MELANOGASTER DNA sequence DC(X15) DG(X16) DT(X17) DT(X18) DT(X19) DT(X20) DA(X21) DT(X22) DT(X23) DT(X24) DT(X25) DT(X26) DT(X27) DT(X28) DT(X29) DT(X30) DT(X31) DT(X32) DA(X33) DA(X34) DA(X35) chain2 chain5 (175) LEU204 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain6 (369) ARG427 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chain3 (359) GLU382 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 chain4 (386) ARG556 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 chain7 (254) PHE285 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ALA286 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) GLN287 0 0 0 0 0 4 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lgprteianrfqsflrtfvdergaytyrdrirrmceqnmssfvvsytdlankehvlayflpeapfqmleifdkvakdmvlsifptyervtteihvrislplieelrtfrklhlnqlvrtlgvvtattgvlpqlsvikydcvknmeqtlyrnyqkitlqespgripagriprskdvilladlcdqckpgdelevtgiytnnydgslntdqgfpvfatviianhvvvkdskqvdiatiqklskdprivervvasmapsiyghdyikralalalfggesknpgekhkvrgdinllicgdpgtaksqflkytekvapravfttgqgasavglyvrrnpvsrewtleagalvladqgvclidefdkmndqdrtsiheameqqsisiskagivtslqarctviaaanpiggrydpsmtfsenvnlsepilsrfdvlcvvkdefqlakfvvhshmkhheipqdllrqyivyakenirpkltnidedkiakmyaqlrqesfatgslpitvrhiesvirmseaharmhlrenvmeadvsmairmmlesfieaqkfsvmkkmrstfqky/egeqfikdiqreyvdflddeedqgiyaghvkdmiaekskrlivnvndlkrknpqralgllsnaadeqlafgralkeyastvdpgyakmhedlfvgferhvtprsltsiylgnmvcvegivtkvslirpkvvrsvhycpntrkvmerkytdltsfeavpsgaayptkdedgnlleteyglsvykdhqtltiqempekaplprsvdivcdddlvdrckpgdrvqivgsyrclpgkrgtfrtvllannisllskeldisredimlckklaknndifellskslapsighvkqailclllggvekilpngtrlrgdinvllgdpsaksqllryvlntapraipttgrgssgvgltaavttdqEtgerrleagamvladrgvvcidefdkmsdidrtaihevmeqgrvtiskagihaslnarcsvlaaanpvygrydqyktpmeniglqdsllsrfdllfvmldvidsdvdqmisdhvvrmhryrnpkeyekydallhgksrqrhekilsvefmrkyihiakcmkpklgeqaceaianeysrlrsqeavetdvartqpitartletlirlstahararmsksvtiddahaaielv/qlvvwgtnvvvsqckskfksfimrfidpsaeqdeiseninqplylqkleeihtleepylnlncahlktfdqdlyrqlicypqevipgfdmainemfferypaallehqiqvfnadktrnmrslnpedmdqlisisgmvirssnvipemreaffscnicsfsttvevdrgrinqptlctncntnhcfrlihnrseftdkqlvklqespddmaagqtphnvllyahndlvdkvqpgdrvtvtgiyratplktgglsssvksvykthvdvvhfrkfppervellqllakkpdiydrlaraiapsiyenddikkgillqlfggtkkkhatlgrqnfrseihlllcgdpgtsksqmlqyvfnlvprsqytsgrgssavgltayvtkdpetRqlvlqtgalvladngvccidefdkmndstrsvlhevmeqqtlsiakagiicqlnartsilaaanpaesqwnkrkniidnvqlphtllsrfdliflvldpqdeifdkrlashlvslyyvtrheeedtmfdmsvlrdyiayarehlsptlsdeaqqrliqayvdmrkvgagrgqisayprqleslirlseahakvrlsnqvelldveeawrlhrealkqsat/nqqdaqinlqavkkkykefirtfneenffykyrdtlkrnylngryfleiemedlvgfdetladklnkqptehleifeeaarevadeitaprpeheehmhdiqillsnptnirqlksdcvsklvkiagiivaasgisakatrmsiqclscstvipnlyalprkcnteqagrpkcpLdpffimpdkckcvdfqtlklqelpdfvpqgeiprhlqlfcdrslcervvpgnrvliqgiysirkvgkavvgvrapymrvvgitvdsegagaisrytsdeeehfrrmaasgdiyerlsqslapsifgsrdikkaitcmlfggsrkrlpdglcrrgdinvlllgdpgtaksqllkfvekvpiavytsgkgsstdpqtrnfvmeggamvladggvvcidefdkmreddrvaiheameqqtisiakagitttlnsrcsvlaaansifgrwddtkgeenidfmptilsrfdmifivkdihdesrditlakhiinvhlssnksapsepaegeislstfkkyihycrthcgprlseapitvrqleviriseslakirlqpfatdehvnealrlfqvstldaam/vkdevgiraqklfqdfleefkedgeikytrpaaslespdrctlevsfedvekydqnlataiieeyyhiypflcqsvsnyvkdriglktqkdcyvaftevptrkvrdlttskigtlirisgqvvrthpvhpelvsgvfmcldcqteirnveqqfkftnpticrnpvcsnrkrfmldvekslfldfqkiriqetqaelprgcipraveiilrselvetvqagdrydftgtlivvpdyrmaflacsvqatdlpmsevtaedmkkqmtdaewhkiyemskdrnlyqnlisslfpsiygndevkrgillqqfggvaktttektslrgdinvcivgdpstaksqflkqvsdfspraiytsgkassaagltaavvRdeesfdfvieagalmladngiccidefdkmdqrdqvaiheameqqtisiaragvratlnartsilaaanpingrydrskslqqniqlsapimsrfdlffilvdecnevvdyaiarkivdlhsnieesveraytreevlryvtfarqfkpvisqeaghmlvenyghlrqrdtgtswritvrqlesmirlseamaklecsnrvlerhvkeafrllnksiir/rrdyaqdresiktflsefckcdddgkkefvygsqlvklahreqvlitidlddlaefneslaeavncrrytsifsdviaellpsvhakdaldvyiehrlmmefpselmkrfevgfahsirevkaqhigklvtvrgivtrctevkpmmvvatytcdrcgsetyqpvnslsftpvhdcpsddcrvnkaggrlylqtrgskfvkfqevkmqehsdqvpvghiprsmtimcrgevtrmaqpgdhivvsgvflplmrtgFAQmiqgllsetflqahriicipeeleelaqddfyerlatslapeiyghldvkkalllllvggvdkrpdgmkirgniniclmgdpgvaksqllgyisrlavrsqyttgrgssgvgltaavmkdpltgemtleggalvladqgvccidefdkmadqdrtaihevmeqqtisiakagimttlnarvsilaaanpafgrynprrtveqniqlpaallsrfdllwliqdkpdrdndlrlakhityvhshskqpptrvkaldmnlmrryinlckrknptipdeltdyivgayvelrrearnqkdmtftsarnllgilrlstalarlrlsdsvekddvaealrllemskdslnq >6raz_3:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=D. MELANOGASTER CMG-DNA, STATE 2B organism=? DNA sequence DC(X15) DG(X16) DT(X17) DT(X18) DT(X19) DT(X20) DA(X21) DT(X22) DT(X23) DT(X24) DT(X25) DT(X26) DT(X27) DT(X28) DT(X29) DT(X30) DT(X31) DT(X32) DA(X33) DA(X34) DA(X35) chain3 (359) GLU382 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 prot.sequence egeqfikdiqreyvdflddeedqgiyaghvkdmiaekskrlivnvndlkrknpqralgllsnaadeqlafgralkeyastvdpgyakmhedlfvgferhvtprsltsiylgnmvcvegivtkvslirpkvvrsvhycpntrkvmerkytdltsfeavpsgaayptkdedgnlleteyglsvykdhqtltiqempekaplprsvdivcdddlvdrckpgdrvqivgsyrclpgkrgtfrtvllannisllskeldisredimlckklaknndifellskslapsighvkqailclllggvekilpngtrlrgdinvllgdpsaksqllryvlntapraipttgrgssgvgltaavttdqEtgerrleagamvladrgvvcidefdkmsdidrtaihevmeqgrvtiskagihaslnarcsvlaaanpvygrydqyktpmeniglqdsllsrfdllfvmldvidsdvdqmisdhvvrmhryrnpkeyekydallhgksrqrhekilsvefmrkyihiakcmkpklgeqaceaianeysrlrsqeavetdvartqpitartletlirlstahararmsksvtiddahaaielv >6raz_4:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=D. MELANOGASTER CMG-DNA, STATE 2B organism=? DNA sequence DC(X15) DG(X16) DT(X17) DT(X18) DT(X19) DT(X20) DA(X21) DT(X22) DT(X23) DT(X24) DT(X25) DT(X26) DT(X27) DT(X28) DT(X29) DT(X30) DT(X31) DT(X32) DA(X33) DA(X34) DA(X35) chain4 (386) ARG556 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 prot.sequence qlvvwgtnvvvsqckskfksfimrfidpsaeqdeiseninqplylqkleeihtleepylnlncahlktfdqdlyrqlicypqevipgfdmainemfferypaallehqiqvfnadktrnmrslnpedmdqlisisgmvirssnvipemreaffscnicsfsttvevdrgrinqptlctncntnhcfrlihnrseftdkqlvklqespddmaagqtphnvllyahndlvdkvqpgdrvtvtgiyratplktgglsssvksvykthvdvvhfrkfppervellqllakkpdiydrlaraiapsiyenddikkgillqlfggtkkkhatlgrqnfrseihlllcgdpgtsksqmlqyvfnlvprsqytsgrgssavgltayvtkdpetRqlvlqtgalvladngvccidefdkmndstrsvlhevmeqqtlsiakagiicqlnartsilaaanpaesqwnkrkniidnvqlphtllsrfdliflvldpqdeifdkrlashlvslyyvtrheeedtmfdmsvlrdyiayarehlsptlsdeaqqrliqayvdmrkvgagrgqisayprqleslirlseahakvrlsnqvelldveeawrlhrealkqsat >6raz_6:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=D. MELANOGASTER CMG-DNA, STATE 2B organism=? DNA sequence DC(X15) DG(X16) DT(X17) DT(X18) DT(X19) DT(X20) DA(X21) DT(X22) DT(X23) DT(X24) DT(X25) DT(X26) DT(X27) DT(X28) DT(X29) DT(X30) DT(X31) DT(X32) DA(X33) DA(X34) DA(X35) chain6 (369) ARG427 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence vkdevgiraqklfqdfleefkedgeikytrpaaslespdrctlevsfedvekydqnlataiieeyyhiypflcqsvsnyvkdriglktqkdcyvaftevptrkvrdlttskigtlirisgqvvrthpvhpelvsgvfmcldcqteirnveqqfkftnpticrnpvcsnrkrfmldvekslfldfqkiriqetqaelprgcipraveiilrselvetvqagdrydftgtlivvpdyrmaflacsvqatdlpmsevtaedmkkqmtdaewhkiyemskdrnlyqnlisslfpsiygndevkrgillqqfggvaktttektslrgdinvcivgdpstaksqflkqvsdfspraiytsgkassaagltaavvRdeesfdfvieagalmladngiccidefdkmdqrdqvaiheameqqtisiaragvratlnartsilaaanpingrydrskslqqniqlsapimsrfdlffilvdecnevvdyaiarkivdlhsnieesveraytreevlryvtfarqfkpvisqeaghmlvenyghlrqrdtgtswritvrqlesmirlseamaklecsnrvlerhvkeafrllnksiir >6raz_7:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=D. MELANOGASTER CMG-DNA, STATE 2B organism=DROSOPHILA MELANOGASTER DNA sequence DC(X15) DG(X16) DT(X17) DT(X18) DT(X19) DT(X20) DA(X21) DT(X22) DT(X23) DT(X24) DT(X25) DT(X26) DT(X27) DT(X28) DT(X29) DT(X30) DT(X31) DT(X32) DA(X33) DA(X34) DA(X35) chain7 (254) PHE285 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ALA286 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) GLN287 0 0 0 0 0 4 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rrdyaqdresiktflsefckcdddgkkefvygsqlvklahreqvlitidlddlaefneslaeavncrrytsifsdviaellpsvhakdaldvyiehrlmmefpselmkrfevgfahsirevkaqhigklvtvrgivtrctevkpmmvvatytcdrcgsetyqpvnslsftpvhdcpsddcrvnkaggrlylqtrgskfvkfqevkmqehsdqvpvghiprsmtimcrgevtrmaqpgdhivvsgvflplmrtgFAQmiqgllsetflqahriicipeeleelaqddfyerlatslapeiyghldvkkalllllvggvdkrpdgmkirgniniclmgdpgvaksqllgyisrlavrsqyttgrgssgvgltaavmkdpltgemtleggalvladqgvccidefdkmadqdrtaihevmeqqtisiakagimttlnarvsilaaanpafgrynprrtveqniqlpaallsrfdllwliqdkpdrdndlrlakhityvhshskqpptrvkaldmnlmrryinlckrknptipdeltdyivgayvelrrearnqkdmtftsarnllgilrlstalarlrlsdsvekddvaealrllemskdslnq >6rce_I:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=PMAR-LIG_PRES3 organism=Prochlorococcus marinus DNA sequence DA(C22):DT(B21) DT(C23):DA(B20) DT(C24):DA(B19) DG(C25):DC(B18) DC(C26):DG(B17) DG(C27):DC(B16) DA(C28):DT(B15) DC(C29):DG(B14) OMC(C30):DG(B13) DC(C31):DG(B12) DC(D32):DG(B11) DA(D33):DT(B10) DC(D34):DG(B9) DT(D35):DA(B8) DA(D36):DC(B7) DT(D37):DA(B6) DC(D38):DG(B5) DG(D39):DC(B4) DG(D40):DC(B3) DA(D41):DT(B2) DA(D42):DT(B1) chainI (167) VAL171 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (222) PHE226 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (226) MET230 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 (381) SER385 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 (423) PHE427 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 prot.sequence elfkeeiihqlelhpsrldkekiiseamedgiddffegirmaldplvtfgvkivpekeseksqnflwedfrklanklmqreltghaardailtamesatkeewngfyrrvlikdlrcgvsektinkiakkfpkyaipifscplahdsanhekkmigkkqieikldgvrvltiirqnkvemfsrngkqfhnfghiileienvlkedpapydlvldgevmsanfqdlMkqvhrkdgkqtkdavlhlfdlcplenfqkgrwntkqtarsllvkkwvakhslllkhiqtlewenvdldtiqgqkrfvelnksaveggyegvmikdpdgmyeckrthswlkakpfievtlkvvsveegtgrnkgrlgailvegeddgyeyslscgSgfsdiqreeywskrkhllgqlveiradaktkskdgvafslrFprfkcfrgf >6rh3_CD: title=CRYO-EM STRUCTURE OF E. COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO CTP SUBSTRATE organism=ESCHERICHIA COLI K-12 DNA sequence DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DA(T16):DC(N24) DG(T17):DC(N13) DC(T18):DC(N12) DA(T19):DT(N11) DC(T20):DG(N10) DA(T21):DC(N9) DC(T22):DA(N8) chainC chainD ( 31) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (917) MET932 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltMrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6ri7_CD:GreA_transcript_cleavage_protein,_N-terminal_domain;FKBP-like; title=CRYO-EM STRUCTURE OF E. COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO GREB TRANSCRIPTION FACTOR organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(N5):DC(T25) DG(N6):DT(T24) DT(N7):DA(T23) DA(N8):DC(T22) DC(N9):DA(T21) DG(N10):DC(T20) DT(N11):DA(T19) DC(N12):DC(T18) DC(N13):DG(T17) DC(N24):DA(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DA(N36):DT(T4) chainC chainD ( 31) TYR46 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6ri9_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF E. COLI RNA POLYMERASE BACKTRACKED ELONGATION COMPLEX IN NON-SWIVELED STATE organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(T1):DC(N39) DC(T2):DG(N38) DA(T3):DT(N37) DG(T4):DC(N36) DC(T5):DG(N35) DT(T6):DA(N34) DA(T7):DT(N33) DG(T8):DC(N32) DC(T9):DG(N31) DC(T10):DG(N30) DA(T11):DT(N29) DT(T12):DA(N28) DG(T13):DC(N27) DC(T14):DG(N26) DA(T15):DG(N25) DC(T16):DA(N24) DA(T17):DC(N15) DT(T18):DT(N14) DC(T19):DT(N13) DG(T20):DA(N12) DC(T21):DC(N11) DC(T22):DC(N10) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreragfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6ri9_CD: title=CRYO-EM STRUCTURE OF E. COLI RNA POLYMERASE BACKTRACKED ELONGATION COMPLEX IN NON-SWIVELED STATE organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(N10):DC(T22) DC(N11):DC(T21) DA(N12):DG(T20) DT(N13):DC(T19) DT(N14):DT(T18) DC(N15):DA(T17) DA(N24):DC(T16) DG(N25):DA(T15) DG(N26):DC(T14) DC(N27):DG(T13) DA(N28):DT(T12) DT(N29):DA(T11) DG(N30):DC(T10) DG(N31):DC(T9) DC(N32):DG(T8) DT(N33):DA(T7) DA(N34):DT(T6) DG(N35):DC(T5) DC(N36):DG(T4) DT(N37):DA(T3) DG(N38):DC(T2) DC(N39):DG(T1) chainC (150) ARG151 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 31) TYR46 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreragfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaritgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6rin_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF E. COLI RNA POLYMERASE BACKTRACKED ELONGATION COMPLEX BOUND TO GREB TRANSCRIPTION FACTOR organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(T2):DG(N38) DA(T3):DT(N37) DG(T4):DC(N36) DC(T5):DG(N35) DT(T6):DA(N34) DA(T7):DT(N33) DG(T8):DC(N32) DC(T9):DG(N31) DC(T10):DG(N30) DA(T11):DT(N29) DT(T12):DA(N28) DG(T13):DC(N27) DC(T14):DG(N26) DA(T15):DG(N25) DC(T16):DA(N24) DA(T17):DC(N15) DT(T18):DT(N14) DC(T19):DT(N13) DG(T20):DA(N12) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreragfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6rin_CD: title=CRYO-EM STRUCTURE OF E. COLI RNA POLYMERASE BACKTRACKED ELONGATION COMPLEX BOUND TO GREB TRANSCRIPTION FACTOR organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(T2):DG(N38) DA(T3):DT(N37) DG(T4):DC(N36) DC(T5):DG(N35) DT(T6):DA(N34) DA(T7):DT(N33) DG(T8):DC(N32) DC(T9):DG(N31) DC(T10):DG(N30) DA(T11):DT(N29) DT(T12):DA(N28) DG(T13):DC(N27) DC(T14):DG(N26) DA(T15):DG(N25) DC(T16):DA(N24) DA(T17):DC(N15) DT(T18):DT(N14) DC(T19):DT(N13) DG(T20):DA(N12) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 chainD (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreragfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6rip_CD: title=CRYO-EM STRUCTURE OF E. COLI RNA POLYMERASE BACKTRACKED ELONGATION COMPLEX IN SWIVELED STATE organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(N8):DG(T24) DC(N9):DT(T23) DC(N10):DC(T22) DC(N11):DC(T21) DA(N12):DG(T20) DT(N13):DC(T19) DT(N14):DT(T18) DC(N15):DA(T17) DA(N24):DC(T16) DG(N25):DA(T15) DG(N26):DC(T14) DC(N27):DG(T13) DA(N28):DT(T12) DT(N29):DA(T11) DG(N30):DC(T10) DG(N31):DC(T9) DC(N32):DG(T8) DT(N33):DA(T7) DA(N34):DT(T6) DG(N35):DC(T5) DC(N36):DG(T4) DT(N37):DA(T3) DG(N38):DC(T2) DC(N39):DG(T1) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (255) ARG270 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreragfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaritgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6rip_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF E. COLI RNA POLYMERASE BACKTRACKED ELONGATION COMPLEX IN SWIVELED STATE organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(T1):DC(N39) DC(T2):DG(N38) DA(T3):DT(N37) DG(T4):DC(N36) DC(T5):DG(N35) DT(T6):DA(N34) DA(T7):DT(N33) DG(T8):DC(N32) DC(T9):DG(N31) DC(T10):DG(N30) DA(T11):DT(N29) DT(T12):DA(N28) DG(T13):DC(N27) DC(T14):DG(N26) DA(T15):DG(N25) DC(T16):DA(N24) DA(T17):DC(N15) DT(T18):DT(N14) DC(T19):DT(N13) DG(T20):DA(N12) DC(T21):DC(N11) DC(T22):DC(N10) DT(T23):DC(N9) DG(T24):DA(N8) chainD (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaritgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6rj9_C: title=CRYO-EM STRUCTURE OF ST1CAS9-SGRNA-TDNA20-ACRIIA6 MONOMERIC ASSEMBLY. organism=STREPTOCOCCUS THERMOPHILUS DNA sequence DA(E1) DA(E2) DT(E3) DA(E4) DC(E5) DT(E6) DT(E7) DT(E8) DT(E9) DA(E10) DT(E11) DC(E12) DA(E13) DA(E14) DC(E15) DG(E16) DC(E17) DA(E18) DA(E19) chainC (212) TYR225 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (239) PHE252 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (273) ASN286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (322) ARG338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 (325) LYS341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (429) GLU445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 (430) GLN446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (431) MET447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 prot.sequence dlvlgldigigsvgvgilnkvtgeiihknsrifpaaqaennlvrrtnrqgrrltrrkkhrrvrlnrlfeesglitdftkisinlnpyqlrvkgltdelsneelfialknmvkhrgisylddyaqivkenskqletktpgqiqleryqtygqlrgdftvekdgkkhrlinvfptsayrsealrilqtqqefnpqitdefinryleiltgkrkYyhgpgneksrtdygryrtsgetldniFgiligkctfypdefraakasytaqefnllndlnNltvpkklskeqknqiinyvknekamgpaklfkyiakllscdvadikgyRidKsgkaeihtfeayrkmktletldieqmdretldklayvltlnteregiqealehefadgsfsqkqvdelvqfrkanssifgkgwhnfsvklmmelipelyetseEQMtiltrlgkqktkyidekllteeiynpvvaksvrqaikivnaaikeygdfdnivieasrvvlnalqehfrahkidtkvsvvrgqftsqlrrhwghhhavdaliiaassilfsyqvdskfnrkisdatiyatrqakvgkdkadetyvlgkikdiytqdgydafmkiykkdkskflmyrhdpqtfekviepilenpflkykeehgyirkyskkgngpeikslkyydsklgnhiditpkdsnnkvvlqsvspwradvyfnkttgkyeilglkyadlqfekgtgtykisqekyndikkkegvdsdsefkftlykndlllvkdtetkeqqlfrflsrtmpkqkhyvelkpydkqkfeggealikvlgnvansgqckkglgksnisiykvrtdvlgnqhiiknegdkpkldf >6rja_F: title=CRYO-EM STRUCTURE OF ST1CAS9-SGRNA-TDNA20-ACRIIA6 DIMERIC ASSEMBLY. organism=? DNA sequence DA(H1) DA(H2) DT(H3) DA(H4) DC(H5) DT(H6) DT(H7) DT(H8) DT(H9) DA(H10) DT(H11) DC(H12) DA(H13) DA(H14) DC(H15) DG(H16) DC(H17) DA(H18) DA(H19) chainF ( 54) THR56 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) TYR225 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (240) PHE252 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (316) ARG338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (423) GLU445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (425) MET447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 prot.sequence dlvlgldigigsvgvgilnkvtgeiihknsrifpaaqaennlvrrtnrqgrrlTrrkkhrrvrlnrlfeesglitdftkisinlnpyqlrvkgltdelsneelfialknmvkhrgisyldgdyaqivkenskqletktpgqiqleryqtygqlrgdftvekdgkkhrlinvfptsayrsealrilqtqqefnpqitdefinryleiltgkrkYyhgpgneksrtdygryrtsgetldniFgiligkctfypdefraakasytaqefnllndlnnskeqknqiinyvknekamgpaklfkyiakllscdvadikgyRidksgkaeihtfeayrkmktletldieqmdretldklayvltlnteregiqealehefadgsfsqkqvdelvqfrkanssifgkgwhnfsvklmmelipelyetseEqMtiltrlgktkyidekllteeiynpvvaksvrqaikivnaaikeygdfdniviesrvvlnalqehfrahkidtkvsvhhhavdaliiaassdsilfsyqvdskfnrkisdatiyatrqakvgkdkadetyvlgkikdiytqdgydafmkiykkdkskflmyrhdpqtfekviepilenpflkykeehgyirkyskkgngpeikslkyydsklgnhiditpkdsnnkvvlqsvspwradvyfnkttgkyeilglkyadlqfekgtgtykisqekyndikkkegvdsdsefkftlykndlllvkdtetkeqqlfrflsrtmpkqkhyvelkpydkqkfeggealikvlgnvansgqckkglgksnisiykvrtdvlgnqhiiknegdkpkldf >6rjd_C: title=CRYO-EM STRUCTURE OF ST1CAS9-SGRNA-TDNA59-NTPAM COMPLEX. organism=STREPTOCOCCUS THERMOPHILUS DGCC 7710 DNA sequence DG(G1):DC(E23) DC(G2):DG(E22) DA(G3):DT(E21) DG(G4):DC(E20) DA(G5):DT(E19) DA(G6):DT(E18) DA(G8):DT(E16) DT(G9):DA(E15) DG(G10):DC(E14) DA(G11):DT(E13) DA(G12):DT(E12) chainC (759) MET1049 0 0 0 0 5 4 0 0 0 0 0 (762) GLN1052 0 0 0 0 0 0 5 0 0 0 0 (765) TYR1055 0 0 0 0 0 1 0 0 0 0 0 (792) SER1082 0 0 0 0 2 0 0 0 0 0 0 (794) GLN1084 0 3 2 3 0 0 0 0 0 0 0 (796) LYS1086 0 0 0 5 2 2 0 0 0 0 0 prot.sequence dlvlgldigigsvgvgilnkvtgeiihknsrifpaaqaennlvrrtnrqgrrltrrkkhrrvrlnrlfeesglitdftkisinlnpyqlrvkgltdelsneelfialknmvkhrgisyldgdyaqivkenskqletktpgqiqleryqtygqlrgdftvekdgkkhrlinvfptsayrsealrilqtqqefnpqitdefinryleiltgkrkyyhgpgneksrtdygryrtsgetldnifgiligkctfypdefraakasytaqefnllndlnnltvlskeqknqiinyvknekamgpaklfkyiakllscdvadikgyridksgkaeihtfeayrkmktletldieqmdretldklayvltlnteregiqealehefadgsfsqkqvdelvqfrkanssifgkgwhnfsvklmmelipelyetseeqmtiltrlgkqkttsssnktkyidekllteeiynpvvaksvrqaikivnaaikeygdfdniviemasrvvlnalqehfrahkidtkvsvhhhavdaliiaassedsilfsyqvdskfnrkisdatiyatrqakvgkdkadetyvlgkikdiytqdgydafmkiykkdkskflmyrhdpqtfekviepilenpflkykeehgyirkyskkgngpeikslkyydsklgnhiditpkdsnnkvvlqsvspwradvyfnkttgkyeilglkyadlqfekgtgtykisqekyndikkkegvdsdsefkftlykndlllvkdtetkeqqlfrflsrtMpkQkhYvelkpydkqkfeggealikvlgnvanSgQcKkglgksnisiykvrtdvlgnqhiiknegdkpkldf >6rjg_C: title=CRYO-EM STRUCTURE OF ST1CAS9-SGRNA-ACRIIA6-TDNA59-NTPAM COMPLEX. organism=STREPTOCOCCUS THERMOPHILUS DGCC 7710 DNA sequence DT(E11):DA(G13) DT(E12):DA(G12) DT(E13):DA(G11) DC(E14):DG(G10) DA(E15):DT(G9) DT(E16):DA(G8) DT(E17):DA(G7) DT(E18):DA(G6) DT(E19):DA(G5) DC(E20):DG(G4) DT(E21):DA(G3) DG(E22):DC(G2) DC(E23):DG(G1) chainC (742) MET1049 0 0 0 0 0 0 0 3 6 1 0 0 0 (745) GLN1052 0 0 0 0 0 4 4 0 0 0 0 0 0 (748) TYR1055 0 0 0 0 0 0 6 1 0 0 0 0 0 (775) SER1082 0 0 0 0 0 0 0 0 0 1 0 0 0 (777) GLN1084 0 0 0 0 0 0 0 0 0 4 3 4 0 (779) LYS1086 0 0 0 0 0 0 0 2 2 5 0 0 0 prot.sequence dlvlgldigigsvgvgilnkvtgeiihknsrifpaaqaennlvrrtnrqgrrltrrkkhrrvrlnrlfeesglitdftkisinlnpyqlrvkgltdelsneelfialknmvkhrgisylgdyaqivkenskqletktpgqiqleryqtygqlrgdftvekdgkkhrlinvfptsayrsealrilqtqqefnpqitdefinryleiltgkrkyyhgpgneksrtdygryrtsgetldnifgiligkctfypdefraakasytaqefnllndlnnllskeqknqiinyvknekamgpaklfkyiakllscdvadikgyridksgkaeihtfeayrkmktletldieqmdretldklayvltlnteregiqealehefadgsfsqkqvdelvqfrkanssifgkgwhnfsvklmmelipelyetseeqmtiltrlgkqkttsssnktkyidekllteeiynpvvaksvrqaikivnaaikeygdfdnivieasrvvlnalqehfrahkidtkvsvvedsilfsyqvdskfnrkisdatiyatrqakvgkdkadetyvlgkikdiytqdgydafmkiykkdkskflmyrhdpqtfekviepilenpflkykeehgyirkyskkgngpeikslkyydsklgnhiditpkdsnnkvvlqsvspwradvyfnkttgkyeilglkyadlqfekgtgtykisqekyndikkkegvdsdsefkftlykndlllvkdtetkeqqlfrflsrtMpkQkhYvelkpydkqkfeggealikvlgnvanSgQcKkglgksnisiykvrtdvlgnqhiiknegdkpkldf >6rks_A:Type_II_DNA_topoisomerase; title=E. COLI DNA GYRASE - DNA BINDING AND CLEAVAGE DOMAIN IN STATE 1 WITHOUT TOPRIM INSERTION organism=ESCHERICHIA COLI K-12 DNA sequence DA(E1):DT(G32) DT(E2):DA(G31) DC(E3):DG(G30) DA(E4):DT(G29) DT(E5):DA(G28) DA(E6):DT(G27) DA(E7):DT(G26) DG(E8):DC(G25) DC(E9):DG(G24) DC(E10):DG(G23) DG(E11):DC(G22) DT(E12):DA(G21) DA(E13):DT(G20) DG(E14):DC(G19) DG(H15):DC(G18) DT(H16):DA(G17) DA(H17):DT(G16) DC(H18):DG(G15) chainA (167) ILE174 0 0 0 0 0 0 0 0 0 4 16 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamryteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaaagddaarpewlepefgvglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan >6rks_AB:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E. COLI DNA GYRASE - DNA BINDING AND CLEAVAGE DOMAIN IN STATE 1 WITHOUT TOPRIM INSERTION organism=ESCHERICHIA COLI K-12 DNA sequence DG(G15):DC(H18) DT(G16):DA(H17) DA(G17):DT(H16) DC(G18):DG(H15) DC(G19):DG(E14) DT(G20):DA(E13) DA(G21):DT(E12) DC(G22):DG(E11) DG(G23):DC(E10) DG(G24):DC(E9) DC(G25):DG(E8) DT(G26):DA(E7) DT(G27):DA(E6) DA(G28):DT(E5) DT(G29):DA(E4) DG(G30):DC(E3) DA(G31):DT(E2) DT(G32):DA(E1) chainA (167) ILE174 0 0 0 0 0 0 0 16 4 0 0 0 0 0 0 0 0 0 chainB ( 48) LYS449 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamryteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaaagddaarpewlepefgvglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/glpgkladcqerdpalselylvegdsaggsakqgrnrknqailplkgKilnvekarfdkmlssqevatlitalynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprra >6rks_CD:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E. COLI DNA GYRASE - DNA BINDING AND CLEAVAGE DOMAIN IN STATE 1 WITHOUT TOPRIM INSERTION organism=ESCHERICHIA COLI K-12 DNA sequence DA(F1):DT(H32) DT(F2):DA(H31) DC(F3):DG(H30) DA(F4):DT(H29) DT(F5):DA(H28) DA(F6):DT(H27) DA(F7):DT(H26) DG(F8):DC(H25) DC(F9):DG(H24) DC(F10):DG(H23) DG(F11):DC(H22) DT(F12):DA(H21) DA(F13):DT(H20) DG(F14):DC(H19) DG(G15):DC(H18) DT(G16):DA(H17) DA(G17):DT(H16) DC(G18):DG(H15) chainC (167) ILE174 0 0 0 0 0 0 0 0 0 4 16 0 0 0 0 0 0 0 chainD ( 48) LYS449 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 ( 54) LYS455 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamryteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaaagddaarpewlepefgvglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/glpgkladcqerdpalselylvegdsaggsakqgrnrknqailplkgKilnveKarfdkmlssqevatlitalynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprra >6rks_D:Type_II_DNA_topoisomerase; title=E. COLI DNA GYRASE - DNA BINDING AND CLEAVAGE DOMAIN IN STATE 1 WITHOUT TOPRIM INSERTION organism=? DNA sequence DG(H15):DC(G18) DT(H16):DA(G17) DA(H17):DT(G16) DC(H18):DG(G15) DC(H19):DG(F14) DT(H20):DA(F13) DA(H21):DT(F12) DC(H22):DG(F11) DG(H23):DC(F10) DG(H24):DC(F9) DC(H25):DG(F8) DT(H26):DA(F7) DT(H27):DA(F6) DA(H28):DT(F5) DT(H29):DA(F4) DG(H30):DC(F3) DA(H31):DT(F2) DT(H32):DA(F1) chainD ( 48) LYS449 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS455 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence glpgkladcqerdpalselylvegdsaggsakqgrnrknqailplkgKilnveKarfdkmlssqevatlitalynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprra >6rku_A:Type_II_DNA_topoisomerase; title=E. COLI DNA GYRASE - DNA BINDING AND CLEAVAGE DOMAIN IN STATE 1 organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(G15):DC(H18) DT(G16):DA(H17) DA(G17):DT(H16) DC(G18):DG(H15) DC(G19):DG(E14) DT(G20):DA(E13) DA(G21):DT(E12) DC(G22):DG(E11) DG(G23):DC(E10) DG(G24):DC(E9) DC(G25):DG(E8) DT(G26):DA(E7) DT(G27):DA(E6) DA(G28):DT(E5) DT(G29):DA(E4) DG(G30):DC(E3) DA(G31):DT(E2) DT(G32):DA(E1) chainA (167) ILE174 0 0 0 0 0 0 0 12 11 0 0 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamryteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaaagddaarpewlepefgvglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan >6rku_AB:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E. COLI DNA GYRASE - DNA BINDING AND CLEAVAGE DOMAIN IN STATE 1 organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(G15):DC(H18) DT(G16):DA(H17) DA(G17):DT(H16) DC(G18):DG(H15) DC(G19):DG(E14) DT(G20):DA(E13) DA(G21):DT(E12) DC(G22):DG(E11) DG(G23):DC(E10) DG(G24):DC(E9) DC(G25):DG(E8) DT(G26):DA(E7) DT(G27):DA(E6) DA(G28):DT(E5) DT(G29):DA(E4) DG(G30):DC(E3) DA(G31):DT(E2) DT(G32):DA(E1) chainA (167) ILE174 0 0 0 0 0 0 0 12 11 0 0 0 0 0 0 0 0 0 chainB ( 48) LYS449 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamryteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaaagddaarpewlepefgvglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/glpgkladcqerdpalselylvegdsaggsakqgrnrknqailplkgKilnvekarfdkmlssqevatlitalynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprra >6rku_CD:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E. COLI DNA GYRASE - DNA BINDING AND CLEAVAGE DOMAIN IN STATE 1 organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(F1):DT(H32) DT(F2):DA(H31) DC(F3):DG(H30) DA(F4):DT(H29) DT(F5):DA(H28) DA(F6):DT(H27) DA(F7):DT(H26) DG(F8):DC(H25) DC(F9):DG(H24) DC(F10):DG(H23) DG(F11):DC(H22) DT(F12):DA(H21) DA(F13):DT(H20) DG(F14):DC(H19) DG(G15):DC(H18) DT(G16):DA(H17) DA(G17):DT(H16) DC(G18):DG(H15) chainC (167) ILE174 0 0 0 0 0 0 0 0 0 2 14 0 0 0 0 0 0 0 chainD ( 48) LYS449 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 ( 54) LYS455 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamryteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaaagddaarpewlepefgvglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/glpgkladcqerdpalselylvegdsaggsakqgrnrknqailplkgKilnveKarfdkmlssqevatlitalynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprra >6rkv_AB:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E. COLI DNA GYRASE - DNA BINDING AND CLEAVAGE DOMAIN IN STATE 2 organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(E1):DT(G32) DT(E2):DA(G31) DC(E3):DG(G30) DA(E4):DT(G29) DT(E5):DA(G28) DA(E6):DT(G27) DA(E7):DT(G26) DG(E8):DC(G25) DC(E9):DG(G24) DC(E10):DG(G23) DG(E11):DC(G22) DT(E12):DA(G21) DA(E13):DT(G20) DG(E14):DC(G19) DG(H15):DC(G18) DT(H16):DA(G17) DA(H17):DT(G16) DC(H18):DG(G15) chainA ( 25) ARG32 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (167) ILE174 0 0 0 0 0 0 0 0 0 19 11 0 0 0 0 0 0 0 chainB ( 48) LYS449 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 54) LYS455 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgRalpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamryteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaaagddaarpewlepefgvglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/glpgkladcqerdpalselylvegdsaggsakqgrnrknqailplkgKilnveKarfdkmlssqevatlitalynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprra >6rkv_CD:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E. COLI DNA GYRASE - DNA BINDING AND CLEAVAGE DOMAIN IN STATE 2 organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(F1):DT(H32) DT(F2):DA(H31) DC(F3):DG(H30) DA(F4):DT(H29) DT(F5):DA(H28) DA(F6):DT(H27) DA(F7):DT(H26) DG(F8):DC(H25) DC(F9):DG(H24) DC(F10):DG(H23) DG(F11):DC(H22) DT(F12):DA(H21) DA(F13):DT(H20) DG(F14):DC(H19) DG(G15):DC(H18) DT(G16):DA(H17) DA(G17):DT(H16) DC(G18):DG(H15) chainC (167) ILE174 0 0 0 0 0 0 0 0 0 10 16 0 0 0 0 0 0 0 chainD ( 48) LYS449 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 ( 54) LYS455 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamryteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaaagddaarpewlepefgvglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/glpgkladcqerdpalselylvegdsaggsakqgrnrknqailplkgKilnveKarfdkmlssqevatlitalynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprra >6rkv_D:Type_II_DNA_topoisomerase; title=E. COLI DNA GYRASE - DNA BINDING AND CLEAVAGE DOMAIN IN STATE 2 organism=? DNA sequence DA(F1):DT(H32) DT(F2):DA(H31) DC(F3):DG(H30) DA(F4):DT(H29) DT(F5):DA(H28) DA(F6):DT(H27) DA(F7):DT(H26) DG(F8):DC(H25) DC(F9):DG(H24) DC(F10):DG(H23) DG(F11):DC(H22) DT(F12):DA(H21) DA(F13):DT(H20) DG(F14):DC(H19) DG(G15):DC(H18) DT(G16):DA(H17) DA(G17):DT(H16) DC(G18):DG(H15) chainD ( 48) LYS449 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 ( 54) LYS455 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence glpgkladcqerdpalselylvegdsaggsakqgrnrknqailplkgKilnveKarfdkmlssqevatlitalynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprra >6rkw_A:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=CRYOEM STRUCTURE OF THE COMPLETE E. COLI DNA GYRASE COMPLEX BOUND TO A 130 BP DNA DUPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(e1):DA(g62) DG(e2):DC(g61) DG(e3):DC(g60) DC(e4):DG(g59) DC(e5):DG(g58) DT(e6):DA(g57) DG(e7):DC(g56) DC(e8):DG(g55) DA(e9):DT(g54) DA(e10):DT(g53) DC(e11):DG(g52) DG(e12):DC(g51) DC(e13):DG(g50) DG(e14):DC(g49) DG(e15):DC(g48) DG(e16):DC(g47) DC(e17):DG(g46) DA(e18):DT(g45) DT(e19):DA(g44) DC(e20):DG(g43) DC(e21):DG(g42) DC(e22):DG(g41) DG(e23):DC(g40) DA(e24):DT(g39) DT(e25):DA(g38) DG(e26):DC(g37) DC(e27):DG(g36) DC(e28):DG(g35) DG(e29):DC(g34) DC(e30):DG(g33) DC(e31):DG(g32) DG(e32):DC(g31) DG(e33):DC(g30) DA(e34):DT(g29) DA(e35):DT(g28) DG(e36):DC(g27) DC(e37):DG(g26) DG(e38):DC(g25) DA(e39):DT(g24) DG(e40):DC(g23) DA(e41):DT(g22) DA(e42):DT(g21) DG(e43):DC(g20) DA(e44):DT(g19) DA(e45):DT(g18) DT(e46):DA(g17) DC(e47):DG(g16) DA(e48):DT(g15) DT(e49):DA(g14) DA(e50):DT(g13) DA(e51):DT(g12) DG(e52):DC(g11) DC(e53):DG(g10) DC(e54):DG(g9) DG(e55):DC(g8) DT(e56):DA(g7) DA(e57):DT(g6) DG(e58):DC(g5) DG(e59):DC(g4) DT(e60):DA(g3) DA(e61):DT(g2) DC(e62):DG(g1) chainA (167) ILE174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 11 0 0 0 0 0 0 0 (699) ARG712 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (712) ARG725 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (756) LYS769 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (762) LYS775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamryteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaaagddaarpewlepefgvglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitansadinledlitqedvvvtlshqgyvkyqplseyeaqrrggkgksaarikeedfidrllvanthdhilcfssrgrvysmkvyqlpeatrgargrpivnllpleqderitailpvtefeegvkvfmatangtvkktvltefnrlrtagkvaiklvdgdeligvdltsgedevmlfsaegkvvrfkessvRamgcnttgvrgiRlgegdkvvslivprgdgailtatqngygkrtavaeyptksratKgvisiKvternglvvgavqvddcdqimmitdagtlvrtrvseisivgrntqgvilirtaedenvvglqrvae >6rkw_AB:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=CRYOEM STRUCTURE OF THE COMPLETE E. COLI DNA GYRASE COMPLEX BOUND TO A 130 BP DNA DUPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(g1):DC(e62) DT(g2):DA(e61) DA(g3):DT(e60) DC(g4):DG(e59) DC(g5):DG(e58) DT(g6):DA(e57) DA(g7):DT(e56) DC(g8):DG(e55) DG(g9):DC(e54) DG(g10):DC(e53) DC(g11):DG(e52) DT(g12):DA(e51) DT(g13):DA(e50) DA(g14):DT(e49) DT(g15):DA(e48) DG(g16):DC(e47) DA(g17):DT(e46) DT(g18):DA(e45) DT(g19):DA(e44) DC(g20):DG(e43) DT(g21):DA(e42) DT(g22):DA(e41) DC(g23):DG(e40) DT(g24):DA(e39) DC(g25):DG(e38) DG(g26):DC(e37) DC(g27):DG(e36) DT(g28):DA(e35) DT(g29):DA(e34) DC(g30):DG(e33) DC(g31):DG(e32) DG(g32):DC(e31) DG(g33):DC(e30) DC(g34):DG(e29) DG(g35):DC(e28) DG(g36):DC(e27) DC(g37):DG(e26) DA(g38):DT(e25) DT(g39):DA(e24) DC(g40):DG(e23) DG(g41):DC(e22) DG(g42):DC(e21) DG(g43):DC(e20) DA(g44):DT(e19) DT(g45):DA(e18) DG(g46):DC(e17) DC(g47):DG(e16) DC(g48):DG(e15) DC(g49):DG(e14) DG(g50):DC(e13) DC(g51):DG(e12) DG(g52):DC(e11) DT(g53):DA(e10) DT(g54):DA(e9) DG(g55):DC(e8) DC(g56):DG(e7) DA(g57):DT(e6) DG(g58):DC(e5) DG(g59):DC(e4) DC(g60):DG(e3) DC(g61):DG(e2) DA(g62):DT(e1) chainA (167) ILE174 0 0 0 0 0 0 0 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (699) ARG712 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (712) ARG725 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (756) LYS769 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (762) LYS775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamryteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaaagddaarpewlepefgvglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitansadinledlitqedvvvtlshqgyvkyqplseyeaqrrggkgksaarikeedfidrllvanthdhilcfssrgrvysmkvyqlpeatrgargrpivnllpleqderitailpvtefeegvkvfmatangtvkktvltefnrlrtagkvaiklvdgdeligvdltsgedevmlfsaegkvvrfkessvRamgcnttgvrgiRlgegdkvvslivprgdgailtatqngygkrtavaeyptksratKgvisiKvternglvvgavqvddcdqimmitdagtlvrtrvseisivgrntqgvilirtaedenvvglqrvae/snsydsssikvlkgldavrkrpgmyigdtddgtglhhmvfevvdnaidealaghckeiivtihadnsvsvqddgrgiptgihpeegvsaaevimtvlhaggkfddnsykvsgglhgvgvsvvnalsqklelviqregkihrqiyehgvpqaplavtgetektgtmvRfwpsletftnvtefeyeilakrlrelsflnsgvsirlrdkrdgkedhfhyeggikafveylnknktpihpnifyfstekdgigvevalqwndgfqeniycftnnipqrdggthlagfraamtrtlnaymdkegyskkakvsatgddaregliavvsvkvpdpkfssqtkdklvssevksaveqqmnellaeyllenptdakivvgkiidaarareaarraremtrrkgaldlaglpgkladcqerdpalselylvegdsaggsakqgrnrknqailplkgkilnvekarfdkmlssqevatlitalynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiErgerrqpvasfeQaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrVtvkdaIaadqlfttlmgdaveprra >6rkw_CD:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=CRYOEM STRUCTURE OF THE COMPLETE E. COLI DNA GYRASE COMPLEX BOUND TO A 130 BP DNA DUPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(h1):DC(f62) DT(h2):DA(f61) DA(h3):DT(f60) DC(h4):DG(f59) DC(h5):DG(f58) DT(h6):DA(f57) DA(h7):DT(f56) DC(h8):DG(f55) DG(h9):DC(f54) DG(h10):DC(f53) DC(h11):DG(f52) DT(h12):DA(f51) DT(h13):DA(f50) DA(h14):DT(f49) DT(h15):DA(f48) DG(h16):DC(f47) DA(h17):DT(f46) DT(h18):DA(f45) DT(h19):DA(f44) DC(h20):DG(f43) DT(h21):DA(f42) DT(h22):DA(f41) DC(h23):DG(f40) DT(h24):DA(f39) DC(h25):DG(f38) DG(h26):DC(f37) DC(h27):DG(f36) DT(h28):DA(f35) DT(h29):DA(f34) DC(h30):DG(f33) DC(h31):DG(f32) DG(h32):DC(f31) DG(h33):DC(f30) DC(h34):DG(f29) DG(h35):DC(f28) DG(h36):DC(f27) DC(h37):DG(f26) DA(h38):DT(f25) DT(h39):DA(f24) DC(h40):DG(f23) DG(h41):DC(f22) DG(h42):DC(f21) DG(h43):DC(f20) DA(h44):DT(f19) DT(h45):DA(f18) DG(h46):DC(f17) DC(h47):DG(f16) DC(h48):DG(f15) DC(h49):DG(f14) DG(h50):DC(f13) DC(h51):DG(f12) DG(h52):DC(f11) DT(h53):DA(f10) DT(h54):DA(f9) DG(h55):DC(f8) DC(h56):DG(f7) DA(h57):DT(f6) DG(h58):DC(f5) DG(h59):DC(f4) DC(h60):DG(f3) DC(h61):DG(f2) DA(h62):DT(f1) chainC (167) ILE174 0 0 0 0 0 0 0 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (704) ASN717 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (712) ARG725 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (756) LYS769 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (762) LYS775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (448) LYS449 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamryteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaaagddaarpewlepefgvglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitansadinledlitqedvvvtlshqgyvkyqplseyeaqrrggkgksaarikeedfidrllvanthdhilcfssrgrvysmkvyqlpeatrgargrpivnllpleqderitailpvtefeegvkvfmatangtvkktvltefnrlrtagkvaiklvdgdeligvdltsgedevmlfsaegkvvrfkessvramgcNttgvrgiRlgegdkvvslivprgdgailtatqngygkrtavaeyptksratKgvisiKvternglvvgavqvddcdqimmitdagtlvrtrvseisivgrntqgvilirtaedenvvglqrvae/snsydsssikvlkgldavrkrpgmyigdtddgtglhhmvfevvdnaidealaghckeiivtihadnsvsvqddgrgiptgihpeegvsaaevimtvlhaggkfddnsykvsgglhgvgvsvvnalsqklelviqregkihrqiyehgvpqaplavtgetektgtmvrfwpsletftnvtefeyeilakrlrelsflnsgvsirlrdkrdgkedhfhyeggikafveylnknktpihpnifyfstekdgigvevalqwndgfqeniycftnnipqrdggthlagfraamtrtlnaymdkegyskkakvsatgddaregliavvsvkvpdpkfssqtkdklvssevksaveqqmnellaeyllenptdakivvgkiidaarareaarraremtrrkgaldlaglpgkladcqerdpalselylvegdsaggsakqgrnrknqailplkgKilnvekarfdkmlssqevatlitalynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprra >6rnm_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE LLFPG PROTEIN, A THF-DNA AND AN INHIBITOR organism=Lactococcus lactis subsp. cremoris DNA sequence DT(D2):DA(E28) DC(D3):DG(E27) DT(D4):DA(E26) DT(D5):DA(E25) DT(D6):DA(E24) 3DR(D7):DC(E23) DT(D8):DA(E22) DT(D9):DA(E21) DT(D10):DA(E20) DC(D11):DG(E19) DT(D12):DA(E18) DC(D13):DG(E17) DG(D14):DC(E16) chainA ( 74) ARG74 0 0 0 0 0 0 7 4 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 13 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 2 0 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 78 15 1 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 11 37 0 0 0 0 0 0 (260) ARG260 0 0 0 0 0 0 5 1 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssirtysalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >6rno_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE LLFPG PROTEIN, A THF-DNA AND AN INHIBITOR organism=Lactococcus lactis subsp. cremoris DNA sequence DC(E16):DG(D14) DG(E17):DC(D13) DA(E18):DT(D12) DG(E19):DC(D11) DA(E20):DT(D10) DA(E21):DT(D9) DA(E22):DT(D8) DC(E23):DT(D6) DA(E24):DT(D5) DA(E25):DT(D4) DA(E26):DC(D3) DG(E27):DT(D2) DA(E28):DC(D1) chainA ( 74) ARG74 0 0 0 0 0 3 9 0 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 13 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 0 0 0 1 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 1 31 23 0 0 0 0 (111) PHE111 0 0 0 0 0 0 37 12 0 0 0 0 0 (256) ARG260 0 0 0 0 0 1 5 0 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssialgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >6rnr_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE LLFPG PROTEIN, A THF- DNA AND AN INHIBITOR organism=Lactococcus lactis subsp. cremoris DNA sequence DC(E16):DG(D14) DG(E17):DC(D13) DA(E18):DT(D12) DG(E19):DC(D11) DA(E20):DT(D10) DA(E21):DT(D9) DA(E22):DT(D8) DC(E23):3DR(D7) DA(E24):DT(D6) DA(E25):DT(D5) DA(E26):DT(D4) DG(E27):DC(D3) DA(E28):DT(D2) chainA ( 74) ARG74 0 0 0 0 0 3 14 0 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 26 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 0 0 0 0 1 0 0 0 0 (109) ARG109 0 0 0 0 0 0 2 15 39 0 0 0 0 (111) PHE111 0 0 0 0 0 0 68 12 0 0 0 0 0 (255) ARG260 0 0 0 0 0 1 10 0 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >6rny_ABFGH: title=PFV INTASOME - NUCLEOSOME STRAND TRANSFER COMPLEX organism=HOMO SAPIENS DNA sequence DC(I-36):DG(U36) DT(I-35):DA(U35) DT(I-34):DA(U34) DC(I-33):DG(U33) DC(I-32):DG(U32) DC(I-31):DG(U31) DA(I-30):DT(U30) DG(I-29):DC(U29) DG(I-28):DC(U28) DA(I-27):DT(U27) DA(I-26):DT(U26) DA(I-25):DT(U25) DC(I-24):DG(U24) DA(I-23):DT(U23) DG(I-22):DC(U22) DG(I-21):DC(U21) DT(I-20):DA(U20) DT(I-19):DA(U19) DT(I-18):DA(U18) DC(I-17):DG(U17) DA(I-16):DT(U16) DC(I-15):DG(U15) DC(I-14):DG(U14) DA(I-13):DT(U13) DG(I-12):DC(U12) DC(I-11):DG(U11) DC(I-10):DG(U10) DA(I-9):DT(U9) DG(I-8):DC(U8) DG(I-7):DC(U7) DC(I-6):DG(U6) DC(I-5):DG(U5) DT(I-4):DA(U4) DT(I-3):DA(U3) DG(I-2):DC(U2) DA(I-1):DT(U1) DA(I0):DT(U0) DT(I1):DA(U-1) DG(I2):DC(U-2) DC(I3):DG(U-3) DA(I4):DT(U-4) DA(I5):DT(U-5) DT(I6):DA(U-6) DT(I7):DA(U-7) DG(I8):DC(U-8) DT(I9):DA(U-9) DC(I10):DG(U-10) DT(I11):DA(U-11) DT(I12):DA(U-12) DA(I13):DT(U-13) DC(I14):DG(U-14) DT(I15):DA(U-15) DA(I16):DT(U-16) DG(I17):DC(U-17) DG(I18):DC(U-18) DA(I19):DT(U-19) DA(I20):DT(U-20) DT(I21):DA(U-21) DA(I22):DT(U-22) DT(I23):DA(U-23) DT(I24):DA(U-24) DT(I25):DA(U-25) DG(I26):DC(U-26) DG(I27):DC(U-27) DA(I28):DT(U-28) DC(I29):DG(U-29) DT(I30):DA(U-30) DT(I31):DA(U-31) DC(I32):DG(U-32) DC(I33):DG(U-33) DC(I34):DG(U-34) DC(I35):DG(U-35) DA(I36):DT(U-36) DC(I37):DG(U-37) DC(I38):DG(U-38) DT(I39):DA(U-39) DA(I40):DT(U-40) DC(I41):DG(U-41) DC(I42):DG(U-42) DA(I43):DT(U-43) DT(I44):DA(U-44) DT(I45):DA(U-45) DC(I46):DG(U-46) DA(I47):DT(U-47) DG(I48):DC(U-48) DG(I49):DC(U-49) DT(I50):DA(U-50) DA(I51):DT(U-51) DA(I52):DT(U-52) DC(I53):DG(U-53) DT(I54):DA(U-54) DT(I55):DA(U-55) DG(I56):DC(U-56) DA(I57):DT(U-57) DT(I58):DA(U-58) DA(I59):DT(U-59) DC(I60):DG(U-60) DA(I61):DT(U-61) DA(I62):DT(U-62) DA(I63):DT(U-63) DC(I64):DG(U-64) DA(I65):DT(U-65) DC(I66):DG(U-66) DA(I67):DT(U-67) DG(I68):DC(U-68) DC(I69):DG(U-69) DC(I70):DG(U-70) DC(I71):DG(U-71) chainA ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 16) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 12) LYS31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/kvlrdniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kvlrdniqgitKpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/sRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >6rny_C:Histone-fold; title=PFV INTASOME - NUCLEOSOME STRAND TRANSFER COMPLEX organism=? DNA sequence DG(U-71):DC(I71) DG(U-70):DC(I70) DG(U-69):DC(I69) DC(U-68):DG(I68) DT(U-67):DA(I67) DG(U-66):DC(I66) DT(U-65):DA(I65) DG(U-64):DC(I64) DT(U-63):DA(I63) DT(U-62):DA(I62) DT(U-61):DA(I61) DG(U-60):DC(I60) DT(U-59):DA(I59) DA(U-58):DT(I58) DT(U-57):DA(I57) DC(U-56):DG(I56) DA(U-55):DT(I55) DA(U-54):DT(I54) DG(U-53):DC(I53) DT(U-52):DA(I52) DT(U-51):DA(I51) DA(U-50):DT(I50) DC(U-49):DG(I49) DC(U-48):DG(I48) DT(U-47):DA(I47) DG(U-46):DC(I46) DA(U-45):DT(I45) DA(U-44):DT(I44) DT(U-43):DA(I43) DG(U-42):DC(I42) DG(U-41):DC(I41) DT(U-40):DA(I40) DA(U-39):DT(I39) DG(U-38):DC(I38) DG(U-37):DC(I37) DT(U-36):DA(I36) DG(U-35):DC(I35) DG(U-34):DC(I34) DG(U-33):DC(I33) DG(U-32):DC(I32) DA(U-31):DT(I31) DA(U-30):DT(I30) DG(U-29):DC(I29) DT(U-28):DA(I28) DC(U-27):DG(I27) DC(U-26):DG(I26) DA(U-25):DT(I25) DA(U-24):DT(I24) DA(U-23):DT(I23) DT(U-22):DA(I22) DA(U-21):DT(I21) DT(U-20):DA(I20) DT(U-19):DA(I19) DC(U-18):DG(I18) DC(U-17):DG(I17) DT(U-16):DA(I16) DA(U-15):DT(I15) DG(U-14):DC(I14) DT(U-13):DA(I13) DA(U-12):DT(I12) DA(U-11):DT(I11) DG(U-10):DC(I10) DA(U-9):DT(I9) DC(U-8):DG(I8) DA(U-7):DT(I7) DA(U-6):DT(I6) DT(U-5):DA(I5) DT(U-4):DA(I4) DG(U-3):DC(I3) DC(U-2):DG(I2) DA(U-1):DT(I1) DT(U0):DA(I0) DT(U1):DA(I-1) DC(U2):DG(I-2) DA(U3):DT(I-3) DA(U4):DT(I-4) DG(U5):DC(I-5) DG(U6):DC(I-6) DC(U7):DG(I-7) DC(U8):DG(I-8) DT(U9):DA(I-9) DG(U10):DC(I-10) DG(U11):DC(I-11) DC(U12):DG(I-12) DT(U13):DA(I-13) DG(U14):DC(I-14) DG(U15):DC(I-15) DT(U16):DA(I-16) DG(U17):DC(I-17) DA(U18):DT(I-18) DA(U19):DT(I-19) DA(U20):DT(I-20) DC(U21):DG(I-21) DC(U22):DG(I-22) DT(U23):DA(I-23) DG(U24):DC(I-24) DT(U25):DA(I-25) DT(U26):DA(I-26) DT(U27):DA(I-27) DC(U28):DG(I-28) DC(U29):DG(I-29) DT(U30):DA(I-30) DG(U31):DC(I-31) DG(U32):DC(I-32) DG(U33):DC(I-33) DA(U34):DT(I-34) DA(U35):DT(I-35) DG(U36):DC(I-36) DG(J37):DC(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(T-41) DT(J42):DA(T-42) DA(J43):DT(T-43) DG(J44):DC(T-44) DT(J45):DA(T-45) DT(J46):DA(T-46) DG(J47):DC(T-47) DG(J48):DC(T-48) DT(J49):DA(T-49) DT(J50):DA(T-50) DT(J51):DA(T-51) DT(J52):DA(T-52) DC(J53):DG(T-53) DA(J54):DT(T-54) DC(J55):DG(T-55) DC(J56):DG(T-56) DA(J57):DT(T-57) DC(J58):DG(T-58) DA(J59):DT(T-59) DG(J60):DC(T-60) DG(J61):DC(T-61) DG(J62):DC(T-62) DA(J63):DT(T-63) DG(J64):DC(T-64) DA(J65):DT(T-65) DA(J66):DT(T-66) DC(J67):DG(T-67) DC(J68):DG(T-68) DT(J69):DA(T-69) DG(J70):DC(T-70) DG(J71):DC(T-71) DA(J72):DT(T-72) DC(J73):DG(T-73) chainC ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk >6rny_CDEKO: title=PFV INTASOME - NUCLEOSOME STRAND TRANSFER COMPLEX organism=HOMO SAPIENS / HUMAN SPUMARETROVIRUS DNA sequence DG(T-73):DC(J73) DT(T-72):DA(J72) DC(T-71):DG(J71) DC(T-70):DG(J70) DA(T-69):DT(J69) DG(T-68):DC(J68) DG(T-67):DC(J67) DT(T-66):DA(J66) DT(T-65):DA(J65) DC(T-64):DG(J64) DT(T-63):DA(J63) DC(T-62):DG(J62) DC(T-61):DG(J61) DC(T-60):DG(J60) DT(T-59):DA(J59) DG(T-58):DC(J58) DT(T-57):DA(J57) DG(T-56):DC(J56) DG(T-55):DC(J55) DT(T-54):DA(J54) DG(T-53):DC(J53) DA(T-52):DT(J52) DA(T-51):DT(J51) DA(T-50):DT(J50) DA(T-49):DT(J49) DC(T-48):DG(J48) DC(T-47):DG(J47) DA(T-46):DT(J46) DA(T-45):DT(J45) DC(T-44):DG(J44) DT(T-43):DA(J43) DA(T-42):DT(J42) DA(T-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DC(I-37):DG(J37) DC(I-36):DG(U36) DT(I-35):DA(U35) DT(I-34):DA(U34) DC(I-33):DG(U33) DC(I-32):DG(U32) DC(I-31):DG(U31) DA(I-30):DT(U30) DG(I-29):DC(U29) DG(I-28):DC(U28) DA(I-27):DT(U27) DA(I-26):DT(U26) DA(I-25):DT(U25) DC(I-24):DG(U24) DA(I-23):DT(U23) DG(I-22):DC(U22) DG(I-21):DC(U21) DT(I-20):DA(U20) DT(I-19):DA(U19) DT(I-18):DA(U18) DC(I-17):DG(U17) DA(I-16):DT(U16) DC(I-15):DG(U15) DC(I-14):DG(U14) DA(I-13):DT(U13) DG(I-12):DC(U12) DC(I-11):DG(U11) DC(I-10):DG(U10) DA(I-9):DT(U9) DG(I-8):DC(U8) DG(I-7):DC(U7) DC(I-6):DG(U6) DC(I-5):DG(U5) DT(I-4):DA(U4) DT(I-3):DA(U3) DG(I-2):DC(U2) DA(I-1):DT(U1) DA(I0):DT(U0) DT(I1):DA(U-1) DG(I2):DC(U-2) DC(I3):DG(U-3) DA(I4):DT(U-4) DA(I5):DT(U-5) DT(I6):DA(U-6) DT(I7):DA(U-7) DG(I8):DC(U-8) DT(I9):DA(U-9) DC(I10):DG(U-10) DT(I11):DA(U-11) DT(I12):DA(U-12) DA(I13):DT(U-13) DC(I14):DG(U-14) DT(I15):DA(U-15) DA(I16):DT(U-16) DG(I17):DC(U-17) DG(I18):DC(U-18) DA(I19):DT(U-19) DA(I20):DT(U-20) DT(I21):DA(U-21) DA(I22):DT(U-22) DT(I23):DA(U-23) DT(I24):DA(U-24) DT(I25):DA(U-25) DG(I26):DC(U-26) DG(I27):DC(U-27) DA(I28):DT(U-28) DC(I29):DG(U-29) DT(I30):DA(U-30) DT(I31):DA(U-31) DC(I32):DG(U-32) DC(I33):DG(U-33) DC(I34):DG(U-34) DC(I35):DG(U-35) DA(I36):DT(U-36) DC(I37):DG(U-37) DC(I38):DG(U-38) DT(I39):DA(U-39) DA(I40):DT(U-40) DC(I41):DG(U-41) DC(I42):DG(U-42) DA(I43):DT(U-43) DT(I44):DA(U-44) DT(I45):DA(U-45) DC(I46):DG(U-46) DA(I47):DT(U-47) DG(I48):DC(U-48) DG(I49):DC(U-49) DT(I50):DA(U-50) DA(I51):DT(U-51) DA(I52):DT(U-52) DC(I53):DG(U-53) DT(I54):DA(U-54) DT(I55):DA(U-55) DG(I56):DC(U-56) DA(I57):DT(U-57) DT(I58):DA(U-58) DA(I59):DT(U-59) DC(I60):DG(U-60) DA(I61):DT(U-61) DA(I62):DT(U-62) DA(I63):DT(U-63) DC(I64):DG(U-64) DA(I65):DT(U-65) DC(I66):DG(U-66) DA(I67):DT(U-67) DG(I68):DC(U-68) DC(I69):DG(U-69) DC(I70):DG(U-70) DC(I71):DG(U-71) chainC ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) VAL36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK (151) ALA188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) TYR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ARG329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO (151) ALA188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) TYR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ARG329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/sRkesysVyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/hRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/kvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpilrpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgAaftsstfaewakergihlefstpYhpqssgkverknsdikrlltkllvgrptkwydllpvvqlalnntyspvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervaRpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq/kvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpilrpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgAaftsstfaewakergihlefstpYhpqssgkverknsdikrlltkllvgrptkwydllpvvqlalnntyspvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervaRpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >6ro2_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE LLFPG PROTEIN, A THF- DNA AND AN INHIBITOR organism=Lactococcus lactis subsp. cremoris DNA sequence DC(C16):DG(B14) DG(C17):DC(B13) DA(C18):DT(B12) DG(C19):DC(B11) DA(C20):DT(B10) DA(C21):DT(B9) DA(C22):DT(B8) DC(C23):DT(B6) DA(C24):DT(B5) DA(C25):DT(B4) DA(C26):DC(B3) DG(C27):DT(B2) DA(C28):DC(B1) chainA ( 74) ARG74 0 0 0 0 0 4 7 0 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 13 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 0 0 0 1 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 1 33 21 0 0 0 0 (111) PHE111 0 0 0 0 0 0 36 12 0 0 0 0 0 (255) ARG260 0 0 0 0 0 1 5 0 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >6ro4_ABG:P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURE OF THE CORE TFIIH-XPA-DNA COMPLEX organism=HOMO SAPIENS DNA sequence DG(K15):DC(J35) DA(K16):DT(J34) DA(K17):DT(J33) DT(K18):DA(J32) DT(K19):DA(J31) DC(K20):DG(J30) DG(K21):DC(J29) DA(K22):DT(J28) DG(K23):DC(J27) DC(K24):DG(J26) DT(K25):DA(J25) DC(K26):DG(J24) DG(K27):DC(J23) DC(K28):DG(J22) DA(K29):DT(J21) DA(K30):DC(J20) chainA (279) HIS415 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (473) LYS609 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 (493) HIS629 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 chainB (633) ARG686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainG ( 43) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence htsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlgHttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqissHggsrrqeaqrlgrvlrynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/mklnvdgllvyfpydyiypeqfsymrelkrtldakghgvlempsgtgktvsllalimayqrayplevtkliycsrtvpeiekvieelrkllnfyekqegeklpflglalssrknlcihpevtplrfgkdvdgkchsltasyvraqyqhdtslphcrfyeefdahgrevplpagiynlddlkalgrrqgwcpyflarysilhanvvvysyhylldpkiadlvskelarkavvvfdeahnidnvcidsmsvnltrrtldrcqgnletlqktvlraehflgflrrlleyvkwrlrvqhvvqesppaflsglaqrvciqrkplrfcaerlrsllhtleitdladfspltllanfatlvstyakgftiiiepfddrtptianpilhfscmdaslaikpvferfqsviitsgtlspldiypkildfhpvtmatftmtlarvclcpmiigrgndqvaisskfetrediavirnygnlllemsavvpdgivafftsyqymestvaswyeqgileniqrnkllfietqdgaetsvalekyqeacengrgaillsvargkvsegidfvhhygravimfgvpyvytqsrilkarleylrdqfqirendfltfdamrhaaqcvgrairgktdyglmvfadkrfaRgdkrgklprwiqehltdanlnltvdegvqvakyflrqmaqpf/iceecgkefmdsylmnhfdlptcdncrdaddkhklitkteakQeyllkdcdlekrepplkfivkknphhsqwgdmklylklqivkrslevwgsqealeeakevrqenrekmkqkkfdkkvkelrravrssvwkr >6ro4_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF THE CORE TFIIH-XPA-DNA COMPLEX organism=HOMO SAPIENS DNA sequence DG(K15):DC(J35) DA(K16):DT(J34) DA(K17):DT(J33) DT(K18):DA(J32) DT(K19):DA(J31) DC(K20):DG(J30) DG(K21):DC(J29) DA(K22):DT(J28) DG(K23):DC(J27) DC(K24):DG(J26) DT(K25):DA(J25) DC(K26):DG(J24) DG(K27):DC(J23) DC(K28):DG(J22) DA(K29):DT(J21) DA(K30):DC(J20) chainB (633) ARG686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mklnvdgllvyfpydyiypeqfsymrelkrtldakghgvlempsgtgktvsllalimayqrayplevtkliycsrtvpeiekvieelrkllnfyekqegeklpflglalssrknlcihpevtplrfgkdvdgkchsltasyvraqyqhdtslphcrfyeefdahgrevplpagiynlddlkalgrrqgwcpyflarysilhanvvvysyhylldpkiadlvskelarkavvvfdeahnidnvcidsmsvnltrrtldrcqgnletlqktvlraehflgflrrlleyvkwrlrvqhvvqesppaflsglaqrvciqrkplrfcaerlrsllhtleitdladfspltllanfatlvstyakgftiiiepfddrtptianpilhfscmdaslaikpvferfqsviitsgtlspldiypkildfhpvtmatftmtlarvclcpmiigrgndqvaisskfetrediavirnygnlllemsavvpdgivafftsyqymestvaswyeqgileniqrnkllfietqdgaetsvalekyqeacengrgaillsvargkvsegidfvhhygravimfgvpyvytqsrilkarleylrdqfqirendfltfdamrhaaqcvgrairgktdyglmvfadkrfaRgdkrgklprwiqehltdanlnltvdegvqvakyflrqmaqpf >6rok_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE LLFPG PROTEIN, A THF- DNA AND AN INHIBITOR organism=Lactococcus lactis subsp. cremoris DNA sequence DC(D1):DA(E28) DT(D2):DG(E27) DC(D3):DA(E26) DT(D4):DA(E25) DT(D5):DA(E24) DT(D6):DC(E23) DT(D8):DA(E22) DT(D9):DA(E21) DT(D10):DA(E20) DC(D11):DG(E19) DT(D12):DA(E18) DC(D13):DG(E17) DG(D14):DC(E16) chainA ( 74) ARG74 0 0 0 0 0 0 7 4 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 13 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 0 1 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 21 31 1 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 12 38 0 0 0 0 0 0 (260) ARG260 0 0 0 0 0 0 5 1 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssirtysalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >6rp0_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE LLFPG PROTEIN, A THF- DNA AND AN INHIBITOR organism=LACTOCOCCUS LACTIS SUBSP. CREMORIS DNA sequence DC(b1):DA(c14) DT(b2):DG(c13) DC(b3):DA(c12) DT(b4):DA(c11) DT(b5):DA(c10) DT(b6):DC(c9) DT(b7):DA(c8) DT(b8):DA(c7) DT(b9):DA(c6) DC(b10):DG(c5) DT(b11):DA(c4) DC(b12):DG(c3) DG(b13):DC(c2) chainA ( 74) ARG74 0 0 0 0 0 0 7 4 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 12 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 0 1 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 22 31 0 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 12 39 0 0 0 0 0 0 (255) ARG260 0 0 0 0 0 0 5 1 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggssalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >6rp7_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE LLFPG PROTEIN, A THF- DNA AND AN INHIBITOR organism=Lactococcus lactis subsp. cremoris DNA sequence DT(D2):DA(E28) DC(D3):DG(E27) DT(D4):DA(E26) DT(D5):DA(E25) DT(D6):DA(E24) 3DR(D7):DC(E23) DT(D8):DA(E22) DT(D9):DA(E21) DT(D10):DA(E20) DC(D11):DG(E19) DT(D12):DA(E18) DC(D13):DG(E17) DG(D14):DC(E16) chainA ( 74) ARG74 0 0 0 0 0 0 6 3 0 0 0 0 0 ( 75) MET75 0 0 0 0 0 0 13 0 0 0 0 0 0 ( 76) GLU76 0 0 0 0 2 0 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 78 15 1 0 0 0 0 0 0 (111) PHE111 0 0 0 0 0 13 36 0 0 0 0 0 0 (256) ARG260 0 0 0 0 0 0 5 1 0 0 0 0 0 prot.sequence pelpevetvrrelekrivgqkiisieatyprmvltgfeqlkkeltgktiqgisrrgkylifeigddfrlishlRMEgkyrlatldaprekhdhltmkfadgqliyadvRkFgtwelistdqvlpyflkkkigpeptyedfdeklfreklrkstkkikpylleqtlvaglgniyvdevlwlakihpeketnqliessihllhdsiieilqkaiklggsssalgstgkmqnelqvygktgekcsrcgaeiqkikvagRgthfcpvcqqk >6rqh_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE I CLOSED CONFORMATION 1 (CC1) organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T22):DT(U49) DA(T23):DT(U48) DG(T24):DC(U47) DT(T25):DA(U46) DA(T26):DT(U45) DC(T27):DG(U44) DC(T28):DG(U43) DT(T29):DA(U42) DC(T30):DG(U41) DC(T31):DG(U40) DC(T32):DG(U39) DA(T33):DT(U38) DA(T34):DT(U37) DC(T35):DG(U36) DT(T36):DA(U35) DA(T37):DT(U34) DC(T38):DG(U33) DT(T39):DA(U32) DT(T40):DA(U31) DT(T41):DA(U30) DT(T42):DA(U29) DC(T43):DG(U28) DC(T44):DG(U27) DT(T45):DA(U26) DC(T46):DG(U25) DA(T47):DT(U24) DC(T48):DG(U23) DA(T49):DT(U22) DC(T50):DG(U21) DT(T51):DA(U20) DT(T52):DA(U19) DG(T53):DC(U18) DT(T54):DA(U17) DA(T55):DT(U16) DC(T56):DG(U15) DT(T57):DA(U14) DC(T58):DG(U13) DC(T59):DG(U12) DA(T60):DT(U11) chainB (411) GLN427 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) MET430 0 0 0 3 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (415) ASP431 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) ARG434 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (435) MET451 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (436) ARG452 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsedeisnsgylgnklsvsveqvsiakpmsndverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaQvrMDinRgmainfkdkrymsrvlMRvnenigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgsffaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk >6rqh_BQR: title=RNA POLYMERASE I CLOSED CONFORMATION 1 (CC1) organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(U11):DA(T60) DG(U12):DC(T59) DG(U13):DC(T58) DA(U14):DT(T57) DG(U15):DC(T56) DT(U16):DA(T55) DA(U17):DT(T54) DC(U18):DG(T53) DA(U19):DT(T52) DA(U20):DT(T51) DG(U21):DC(T50) DT(U22):DA(T49) DG(U23):DC(T48) DT(U24):DA(T47) DG(U25):DC(T46) DA(U26):DT(T45) DG(U27):DC(T44) DG(U28):DC(T43) DA(U29):DT(T42) DA(U30):DT(T41) DA(U31):DT(T40) DA(U32):DT(T39) DG(U33):DC(T38) DT(U34):DA(T37) DA(U35):DT(T36) DG(U36):DC(T35) DT(U37):DA(T34) DT(U38):DA(T33) DG(U39):DC(T32) DG(U40):DC(T31) DG(U41):DC(T30) DA(U42):DT(T29) DG(U43):DC(T28) DG(U44):DC(T27) DT(U45):DA(T26) DA(U46):DT(T25) DC(U47):DG(T24) DT(U48):DA(T23) DT(U49):DA(T22) chainQ (114) GLN155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ASN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) TYR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) VAL212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) SER213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) GLU292 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (252) ARG293 0 0 0 0 0 0 0 0 0 0 0 0 0 20 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) HIS294 0 0 0 0 0 0 0 0 0 0 0 8 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG297 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 9) THR9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 14 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ILE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB (411) GLN427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (414) MET430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 3 0 0 0 (415) ASP431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (418) ARG434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (435) MET451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (436) ARG452 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 prot.sequence rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsedeisnsgylgnklsvsveqvsiakpmsndverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaQvrMDinRgmainfkdkrymsrvlMRvnenigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgsffaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk/tfirgpicgtdncpsrlwriidgrrtcqyghvmegdvefnddedrqshkkfkkligheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklQlhmtstisilylasthlslpvytcdyikwictakmpyfqaseilpkswriqlpNYyVSilegsispfngqlynkialtcgmihfkeffnseiscqglllklvmqcalppefyfytkqviefeetdirnltlwertdERHtgRvsnhaelrvlsyfmltinwmlsfdrdrqyplkwilsltesltqrtttsesigrnivkvvypdkptssdyfqwseeetleflkwmekqflptdqkiarrklykifpldreanhdgefndsthqltfiedlqeryakqtpffpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhrmn/mfevpitlTnRkfaqrrklkyqyinyisrrfdriskkssdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrfvqnInyrsivppfqtgsrthtakfaitylwsslincqksmlidkisewvltppfmedaevwfiyaschllkadtlsrqfvnrdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrly >6rql_BQR: title=RNA POLYMERASE I CLOSED CONFORMATION 2 (CC2) organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(U11):DA(T60) DG(U12):DC(T59) DG(U13):DC(T58) DA(U14):DT(T57) DG(U15):DC(T56) DT(U16):DA(T55) DA(U17):DT(T54) DC(U18):DG(T53) DA(U19):DT(T52) DA(U20):DT(T51) DG(U21):DC(T50) DT(U22):DA(T49) DG(U23):DC(T48) DT(U24):DA(T47) DG(U25):DC(T46) DA(U26):DT(T45) DG(U27):DC(T44) DG(U28):DC(T43) DA(U29):DT(T42) DA(U30):DT(T41) DA(U31):DT(T40) DA(U32):DT(T39) DG(U33):DC(T38) DT(U34):DA(T37) DA(U35):DT(T36) DG(U36):DC(T35) DT(U37):DA(T34) DT(U38):DA(T33) DG(U39):DC(T32) DG(U40):DC(T31) DG(U41):DC(T30) DA(U42):DT(T29) DG(U43):DC(T28) DG(U44):DC(T27) DT(U45):DA(T26) DA(U46):DT(T25) DC(U47):DG(T24) DT(U48):DA(T23) DT(U49):DA(T22) DC(U50):DG(T21) DA(U51):DT(T20) DT(U52):DA(T19) chainQ (202) ASN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) TYR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) GLU292 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG293 0 0 0 0 0 0 0 0 0 0 0 0 0 15 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) HIS294 0 0 0 0 0 0 0 0 0 0 0 22 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) ARG297 0 0 0 0 0 0 0 0 0 0 0 19 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 17 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ILE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (414) MET430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (435) MET451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (438) ASN454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 prot.sequence rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsedeisnsgylgnklsvsveqvsiakpmsndverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrMdinrgmainfkdkrymsrvlMrvNenigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgsffaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk/tfirgpicgtdncpsrlwriidgrrtcqyghvmegdvefnddedgagvitrrlnlttnatgsfqssqltnsqllqqqqrqshkkfkkligheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklqlhmtstisilylasthlslpvytcdyikwictakmpyfqaseilpkswriqlpNYyvsilegsispfngqlynkialtcgmihfkeffnseiscqglllklvmqcalppefyfytkqviefeetdirnltlwertdERHtgRvsnhaelrvlsyfmltinwmlsfdrdrqyplkwilsltesltqrtttsesigrnivkvvypdkptssdyfqwseeetleflkwmekqflptdqkiarrklykifpldreanhdgefndsthqltfiedlqeryakqtpffpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhrmn/mfevpitltnRkfaqrrklkyqyinyisrrfdriskkssdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrfvqnInyrsivppfqtgsrthtakfaitylwsslincqksmlidkisewvltppfmedaevwfiyaschllkadtlsrqfvnrdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrly >6rqt_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE I-TWH-RRN3-DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(T4):DA(U67) DT(T5):DA(U66) DC(T6):DG(U65) DA(T7):DT(U64) DA(T8):DT(U63) DC(T9):DG(U62) DT(T10):DA(U61) DG(T11):DC(U60) DC(T12):DG(U59) DT(T13):DA(U58) DT(T14):DA(U57) DT(T15):DA(U56) DC(T16):DT(U55) DG(T17):DG(U54) chainA (384) GLU464 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (401) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (512) GLN592 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (933) THR1013 0 0 0 0 0 0 0 0 0 0 0 6 0 0 (1403) ARG1600 0 0 0 0 0 0 0 1 7 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitlgdisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgfistyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevhensqnqllskvlttsllirdlnddlsklrvifsrlmnafvtiqndvnafidstkaqgrtsgkvpipgvkqalekkEglfrkhmmgkrvnyaaRsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQptlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTsrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettgarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna >6rqt_AB: title=RNA POLYMERASE I-TWH-RRN3-DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(T4):DA(U67) DT(T5):DA(U66) DC(T6):DG(U65) DA(T7):DT(U64) DA(T8):DT(U63) DC(T9):DG(U62) DT(T10):DA(U61) DG(T11):DC(U60) DC(T12):DG(U59) DT(T13):DA(U58) DT(T14):DA(U57) DT(T15):DA(U56) DC(T16):DT(U55) DG(T17):DG(U54) chainA (384) GLU464 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (401) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (512) GLN592 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (933) THR1013 0 0 0 0 0 0 0 0 0 0 0 6 0 0 (1403) ARG1600 0 0 0 0 0 0 0 1 7 0 0 0 0 0 chainB (492) LYS513 0 0 0 0 0 0 0 0 0 17 2 7 0 0 prot.sequence mdiskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitlgdisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgfistyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevhensqnqllskvlttsllirdlnddlsklrvifsrlmnafvtiqndvnafidstkaqgrtsgkvpipgvkqalekkEglfrkhmmgkrvnyaaRsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQptlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTsrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettgarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/tadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnisnsgylgnklsvsveqvsiakpmsndverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgsffaqlKtttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlaldpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk >6rrd_ABQR:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE I PRE-INITIATION COMPLEX DNA OPENING INTERMEDIATE 1 organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(T4):DA(U67) DT(T5):DA(U66) DC(T6):DG(U65) DA(T7):DT(U64) DA(T8):DT(U63) DC(T9):DG(U62) DT(T10):DA(U61) DG(T11):DC(U60) DC(T12):DG(U59) DT(T13):DA(U58) DT(T14):DA(U57) DT(T15):DA(U56) DC(T16):DG(U55) DG(T17):DT(U45) DC(T18):DG(U44) DA(T19):DG(U43) DT(T20):DA(U42) DC(T30):DG(U41) DC(T31):DG(U40) DC(T32):DG(U39) DA(T33):DT(U38) DA(T34):DT(U37) DC(T35):DG(U36) DT(T36):DA(U35) DA(T37):DT(U34) DC(T38):DG(U33) DT(T39):DA(U32) DT(T40):DA(U31) DT(T41):DA(U30) DT(T42):DA(U29) DC(T43):DG(U28) DC(T44):DG(U27) DT(T45):DA(U26) DC(T46):DG(U25) DA(T47):DT(U24) DC(T48):DG(U23) DA(T49):DT(U22) DC(T50):DG(U21) DT(T51):DA(U20) DT(T52):DA(U19) DG(T53):DC(U18) DT(T54):DA(U17) DA(T55):DT(U16) DC(T56):DG(U15) DT(T57):DA(U14) DC(T58):DG(U13) DC(T59):DG(U12) DA(T60):DT(U11) chainQ (149) GLN155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ASN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) TYR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) GLU292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (287) ARG293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 20 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) HIS294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 14 0 0 0 0 0 0 0 0 0 0 0 (291) ARG297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 3 0 0 0 0 0 0 0 0 0 0 chainR ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (368) LYS450 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1127) ARG1223 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (440) ASN456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) GLN511 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitldisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgfistyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevhensqnqllskvlttsllirdlnddlsklrvifsrlmnafvtiqndvnafidstkaqgrtsgKvpipgvkqalekkeglfrkhmmgkrvnyaarsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrqptlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavktsrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfnvtlgiprlReivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettgtarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnrqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsedeisnsgylgnklsvsveqvsiakpmsndverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvneNigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgsffaQlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk/tfirgpicgtdncpsrlwriidgrrtcqyghvmegdvefnddedlgagvitrrlnlttnatgsfqssqltnsqllqqqqrqshkkfkkligheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklQlhmtstisilylasthlslpvytcdyikwictakmpyfqaseilpkswriqlpNYyvsilegsispfngqlynkialtcgmihfkeffnseiscqglllklvmqcalppefyfytkqviefeetdirnltlwertdERHtgRvsnhaelrvlsyfmltinwmlsfdrdrqyplkwilsltesltqrtttsesigrnivkvvypdkptssdyfqwseeetleflkwmekqflptdqkiarrklykifpldreanhdgefndsthqltfiedlqeryakqtpffpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhrmn/mfevpitltnRkfaqrrklkyqyinyisrrfdriskkssdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrfvqninyrsivppfqtgsrthtakfaitylwsslincqksmlidkisewvltppfmedaevwfiyaschllkadtlsrqfvnrdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrly >6rrd_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE I PRE-INITIATION COMPLEX DNA OPENING INTERMEDIATE 1 organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(T4):DA(U67) DT(T5):DA(U66) DC(T6):DG(U65) DA(T7):DT(U64) DA(T8):DT(U63) DC(T9):DG(U62) DT(T10):DA(U61) DG(T11):DC(U60) DC(T12):DG(U59) DT(T13):DA(U58) DT(T14):DA(U57) DT(T15):DA(U56) DC(T16):DG(U55) DG(T17):DT(U45) DC(T18):DG(U44) DA(T19):DG(U43) DT(T20):DA(U42) DC(T30):DG(U41) DC(T31):DG(U40) DC(T32):DG(U39) DA(T33):DT(U38) DA(T34):DT(U37) DC(T35):DG(U36) DT(T36):DA(U35) DA(T37):DT(U34) DC(T38):DG(U33) DT(T39):DA(U32) DT(T40):DA(U31) DT(T41):DA(U30) DT(T42):DA(U29) DC(T43):DG(U28) DC(T44):DG(U27) DT(T45):DA(U26) DC(T46):DG(U25) DA(T47):DT(U24) DC(T48):DG(U23) DA(T49):DT(U22) DC(T50):DG(U21) DT(T51):DA(U20) DT(T52):DA(U19) DG(T53):DC(U18) DT(T54):DA(U17) DA(T55):DT(U16) DC(T56):DG(U15) DT(T57):DA(U14) DC(T58):DG(U13) DC(T59):DG(U12) DA(T60):DT(U11) chainB (440) ASN456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) GLN511 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsedeisnsgylgnklsvsveqvsiakpmsndverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvneNigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgsffaQlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk >6rui_ABQR: title=RNA POLYMERASE I PRE-INITIATION COMPLEX DNA OPENING INTERMEDIATE 2 organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(T4):DA(U67) DT(T5):DA(U66) DC(T6):DG(U65) DA(T7):DT(U64) DA(T8):DT(U63) DC(T9):DG(U62) DT(T10):DA(U61) DG(T11):DC(U60) DC(T12):DG(U59) DT(T13):DA(U58) DT(T14):DA(U57) DT(T15):DA(U56) DC(T16):DG(U55) DG(T17):DC(U54) DT(T29):DA(U42) DC(T30):DG(U41) DC(T31):DG(U40) DC(T32):DG(U39) DA(T33):DT(U38) DA(T34):DT(U37) DC(T35):DG(U36) DT(T36):DA(U35) DA(T37):DT(U34) DC(T38):DG(U33) DT(T39):DA(U32) DT(T40):DA(U31) DT(T41):DA(U30) DT(T42):DA(U29) DC(T43):DG(U28) DC(T44):DG(U27) DT(T45):DA(U26) DC(T46):DG(U25) DA(T47):DT(U24) DC(T48):DG(U23) DA(T49):DT(U22) DC(T50):DG(U21) DT(T51):DA(U20) DT(T52):DA(U19) DG(T53):DC(U18) DT(T54):DA(U17) DA(T55):DT(U16) DC(T56):DG(U15) DT(T57):DA(U14) DC(T58):DG(U13) DC(T59):DG(U12) DA(T60):DT(U11) chainA (932) SER1014 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (435) MET451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (491) SER507 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) PHE508 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ (149) GLN155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ASN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) TYR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) SER213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) ILE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) ARG293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 21 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) HIS294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 11 0 0 0 0 0 0 0 0 0 0 0 (291) ARG297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 chainR ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdiskpvgseitsvdfgiltakirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitldisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgfistyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevhensqnqllskvlttsllirdlnddlsklrvifsrlmnafvtiqndvnafidstkaqgrtsgkvpipgvkqalekkeglfrkhmmgkrvnyaarsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrqptlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavktSrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettgtarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnrqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsedeisnsgylgnklsvsveqvsiakpmsndverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlMrvnenigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgSFfaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk/tfirgpicgtdncpsrlwriidgrrtcqyghvmegdvefnddedlgagvitrrlnlttnatgsfqssqltnsqllqqqqrqshkkfkkligheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklQlhmtstisilylasthlslpvytcdyikwictakmpyfqaseilpkswriqlpNYyvSIlegsispfngqlynkialtcgmihfkeffnseiscqglllklvmqcalppefyfytkqviefeetdirnltlwertdeRHtgRvsnhaelrvlsyfmltinwmlsfdrdrqyplkwilsltesltqrtttsesigrnivkvvypdkptssdyfqwseeetleflkwmekqflptdqkiarrklykifpldreanhdgefndsthqltfiedlqeryakqtpffpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhrmn/mfevpitltnRkfaqrrklkyqyinyisrrfdriskkssdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrfvqninyrsivppfqtgsrthtakfaitylwsslincqksmlidkisewvltppfmedaevwfiyaschllkadtlsrqfvnrdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrly >6rui_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE I PRE-INITIATION COMPLEX DNA OPENING INTERMEDIATE 2 organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(T4):DA(U67) DT(T5):DA(U66) DC(T6):DG(U65) DA(T7):DT(U64) DA(T8):DT(U63) DC(T9):DG(U62) DT(T10):DA(U61) DG(T11):DC(U60) DC(T12):DG(U59) DT(T13):DA(U58) DT(T14):DA(U57) DT(T15):DA(U56) DC(T16):DG(U55) DG(T17):DC(U54) DT(T29):DA(U42) DC(T30):DG(U41) DC(T31):DG(U40) DC(T32):DG(U39) DA(T33):DT(U38) DA(T34):DT(U37) DC(T35):DG(U36) DT(T36):DA(U35) DA(T37):DT(U34) DC(T38):DG(U33) DT(T39):DA(U32) DT(T40):DA(U31) DT(T41):DA(U30) DT(T42):DA(U29) DC(T43):DG(U28) DC(T44):DG(U27) DT(T45):DA(U26) DC(T46):DG(U25) DA(T47):DT(U24) DC(T48):DG(U23) DA(T49):DT(U22) DC(T50):DG(U21) DT(T51):DA(U20) DT(T52):DA(U19) DG(T53):DC(U18) DT(T54):DA(U17) DA(T55):DT(U16) DC(T56):DG(U15) DT(T57):DA(U14) DC(T58):DG(U13) DC(T59):DG(U12) DA(T60):DT(U11) chainB (435) MET451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (491) SER507 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) PHE508 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsedeisnsgylgnklsvsveqvsiakpmsndverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlMrvnenigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgSFfaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk >6ruo_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE I OPEN COMPLEX CONFORMATION 1 organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(U11):DA(T60) DG(U12):DC(T59) DG(U13):DC(T58) DA(U14):DT(T57) DG(U15):DC(T56) DT(U16):DA(T55) DA(U17):DT(T54) DC(U18):DG(T53) DA(U19):DT(T52) DA(U20):DT(T51) DG(U21):DC(T50) DT(U22):DA(T49) DG(U23):DC(T48) DT(U24):DA(T47) DG(U25):DC(T46) DA(U26):DT(T45) DG(U27):DC(T44) DG(U28):DC(T43) DA(U29):DT(T42) DA(U30):DT(T41) DA(U31):DT(T40) DA(U32):DT(T39) DG(U33):DC(T38) DT(U34):DA(T37) DA(U35):DT(T36) DG(U36):DC(T35) DT(U37):DA(T34) DT(U38):DA(T33) DG(U39):DC(T32) DG(U40):DC(T31) DC(U41):DC(T30) DG(U42):DT(T29) DA(U53):DC(T28) DG(U54):DC(T27) DT(U55):DA(T23) DA(U56):DA(T22) DA(U57):DG(T21) DA(U58):DT(T20) DG(U59):DA(T19) DC(U60):DC(T18) DA(U61):DG(T17) DG(U62):DC(T16) DT(U63):DT(T15) chainA (512) GLN592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (513) PRO593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (552) GLU632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (933) THR1013 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (934) SER1014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (1402) ARG1600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence iskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitldisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgfiktgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevhensqnqllskvlttsllirdlnddlsklrvifsrlmnafvtiqndvnafidstkaqgrtsgkvpipgvkqalekkeglfrkhmmgkrvnyaarsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdEmnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna >6ruo_ABQR: title=RNA POLYMERASE I OPEN COMPLEX CONFORMATION 1 organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(U11):DA(T60) DG(U12):DC(T59) DG(U13):DC(T58) DA(U14):DT(T57) DG(U15):DC(T56) DT(U16):DA(T55) DA(U17):DT(T54) DC(U18):DG(T53) DA(U19):DT(T52) DA(U20):DT(T51) DG(U21):DC(T50) DT(U22):DA(T49) DG(U23):DC(T48) DT(U24):DA(T47) DG(U25):DC(T46) DA(U26):DT(T45) DG(U27):DC(T44) DG(U28):DC(T43) DA(U29):DT(T42) DA(U30):DT(T41) DA(U31):DT(T40) DA(U32):DT(T39) DG(U33):DC(T38) DT(U34):DA(T37) DA(U35):DT(T36) DG(U36):DC(T35) DT(U37):DA(T34) DT(U38):DA(T33) DG(U39):DC(T32) DG(U40):DC(T31) DC(U41):DC(T30) DG(U42):DT(T29) DA(U53):DC(T28) DG(U54):DC(T27) DT(U55):DA(T23) DA(U56):DA(T22) DA(U57):DG(T21) DA(U58):DT(T20) DG(U59):DA(T19) DC(U60):DC(T18) DA(U61):DG(T17) DG(U62):DC(T16) DT(U63):DT(T15) chainQ ( 44) ASP46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 (102) GLN155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) ASN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) TYR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) GLU292 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG293 0 0 0 0 0 0 0 0 0 0 0 0 0 21 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) HIS294 0 0 0 0 0 0 0 0 0 0 0 2 20 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) THR295 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG297 0 0 0 0 0 0 0 0 0 1 9 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (512) GLN592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (513) PRO593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (552) GLU632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (933) THR1013 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (934) SER1014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (1402) ARG1600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainB (495) GLN511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (801) ARG817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iskpvgseitsvdfgiltakeirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitldisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgfiktgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevhensqnqllskvlttsllirdlnddlsklrvifsrlmnafvtiqndvnafidstkaqgrtsgkvpipgvkqalekkeglfrkhmmgkrvnyaarsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdEmnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsedeisnsgylgnklsvsveqvsiakpmsndverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgsffaQlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnRgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk/tfirgpicgtdncpsrlwriidgrrtcqyghvmegdvefnddeDheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklQlhmtstisilylasthlslpvytcdyikwictakmpyfqaseilpkswriqlpNYyvsilegsispfngqlynkialtcgmihfkeffnseiscqglllklvmqcalppefyfytkqviefeetdirnltlwertdERHTgRvsnhaelrvlsyfmltinwmlsfdrdrqyplkwilsltesltqrtttsesigrnivkvvypdkptssdyfqwseeetleflkwmekqflptdqkiarrklykifpldreanhdgefndsthqltfiedlqeryakqtpffpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhrmn/mfevpitltnRkfaqrrklkyqyinyisrrfdriskkssdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrfvqninyrsivppfqtgsrthtakfaitylwsslincqksmlidkisewvltppfmedaevwfiyaschllkadtlsrqfvnrdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrly >6rwe_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE I OPEN COMPLEX CONFORMATION 2 organism=? DNA sequence DT(T13):DT(U63) DT(T14):DG(U62) DT(T15):DA(U61) DC(T16):DC(U60) DG(T17):DG(U59) DC(T18):DA(U58) DA(T19):DA(U57) DT(T20):DA(U56) DG(T21):DT(U55) DA(T22):DG(U54) DA(T23):DA(U53) DC(T27):DA(U52) DC(T28):DG(U51) DT(T29):DG(U42) DC(T30):DC(U41) DC(T31):DG(U40) DC(T32):DG(U39) DA(T33):DT(U38) DA(T34):DT(U37) DC(T35):DG(U36) DT(T36):DA(U35) DA(T37):DT(U34) DC(T38):DG(U33) DT(T39):DA(U32) DT(T40):DA(U31) DT(T41):DA(U30) DT(T42):DA(U29) DC(T43):DG(U28) DC(T44):DG(U27) DT(T45):DA(U26) DC(T46):DG(U25) DA(T47):DT(U24) DC(T48):DG(U23) DA(T49):DT(U22) DC(T50):DG(U21) DT(T51):DA(U20) DT(T52):DA(U19) DG(T53):DC(U18) DT(T54):DA(U17) DA(T55):DT(U16) DC(T56):DG(U15) DT(T57):DA(U14) DC(T58):DG(U13) DC(T59):DG(U12) DA(T60):DT(U11) chainA (511) GLN592 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (512) PRO593 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (932) THR1013 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (933) SER1014 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1401) ARG1600 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iskpvgseitsvdfgiltakirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitldisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgfiktgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevhensqnqllskvlttsllirdlnddlsklrvifsrlmnafvtiqndvnafidstkaqgrtsgkvpipgvkqalekkeglfrkhmmgkrvnyaarsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna >6rwe_ABMQR: title=RNA POLYMERASE I OPEN COMPLEX CONFORMATION 2 organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(U11):DA(T60) DG(U12):DC(T59) DG(U13):DC(T58) DA(U14):DT(T57) DG(U15):DC(T56) DT(U16):DA(T55) DA(U17):DT(T54) DC(U18):DG(T53) DA(U19):DT(T52) DA(U20):DT(T51) DG(U21):DC(T50) DT(U22):DA(T49) DG(U23):DC(T48) DT(U24):DA(T47) DG(U25):DC(T46) DA(U26):DT(T45) DG(U27):DC(T44) DG(U28):DC(T43) DA(U29):DT(T42) DA(U30):DT(T41) DA(U31):DT(T40) DA(U32):DT(T39) DG(U33):DC(T38) DT(U34):DA(T37) DA(U35):DT(T36) DG(U36):DC(T35) DT(U37):DA(T34) DT(U38):DA(T33) DG(U39):DC(T32) DG(U40):DC(T31) DC(U41):DC(T30) DG(U42):DT(T29) DG(U51):DC(T28) DA(U52):DC(T27) DA(U53):DA(T23) DG(U54):DA(T22) DT(U55):DG(T21) DA(U56):DT(T20) DA(U57):DA(T19) DA(U58):DC(T18) DG(U59):DG(T17) DC(U60):DC(T16) DA(U61):DT(T15) DG(U62):DT(T14) DT(U63):DT(T13) chainM (378) SER387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) SER391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (511) GLN592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (512) PRO593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (932) THR1013 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (933) SER1014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 (1401) ARG1600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 chainB (203) ARG219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 (378) PRO394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (379) ASP395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (438) ASN454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (489) ARG505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (492) PHE508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (493) PHE509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (495) GLN511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 (497) LYS513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 4 0 0 0 0 (801) ARG817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 44) ASP46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 (203) ASN209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) TYR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) SER213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) ARG293 0 0 0 0 0 0 0 0 0 0 0 0 0 24 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) HIS294 0 0 0 0 0 0 0 0 0 0 0 11 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iskpvgseitsvdfgiltakirnlsakqitnptvldnlghpvsgglydlalgaflrnlcstcgldekfcpghqghielpvpcynplffnqlyiylrasclfchhfrlksvevhryacklrllqyglidesykldeitldisstllnelkskrseyvdmaiakalsdgrttergsftatvnderkklvhefhkkllsrgkcdncgmfspkfrkdgftkifetalnekqitnnrvkgfiktgstyilstevknildtvfrkeqcvlqyvfhsrpnlsrklvkadsffmdvlvvpptrfrlpsklgeevhensqnqllskvlttsllirdlnddlsklrvifsrlmnafvtiqndvnafidstkaqgrtsgkvpipgvkqalekkeglfrkhmmgkrvnyaarsvispdpnietneigvppvfavkltypepvtayniaelrqavingpdkwpgatqiqnedgslvsligmsveqrkalanqlltpssnvsthtlnkkvyrhiknrdvvlmnrQPtlhkasmmghkvrvlpnektlrlhyantgaynadfdgdemnmhfpqnenaraealnlantdsqyltptsgspvrgliqdhisagvwltskdsfftreqyqqyiygcirpedghttrskivtlpptifkpyplwtgkqiittvllnvtppdmpginlisknkikneywgkgslenevlfkdgallcgildksqygaskygivhslhevygpevaakvlsvlgrlftnyitataftcgmddlrltaegnkwrtdilktsvdtgreaaaevtnldkdtpaddpellkrlqeilrdnnksgildavtsskvnaitsqvvskcvpdgtmkkfpcnsmqamalsgakgsnvnvsqimcllgqqalegrrvpvmvsgktlpsfkpyetdamaggyvkgrfysgikpqeyyfhcmagreglidtavkTSrsgylqrcltkqlegvhvsydnsirdadgtlvqfmyggdaiditkeshmtqfefcldnyyallkkynpsaliehldvesalkyskktlkyrkkhskephykqsvkydpvlakynpakylgsvsenfqdklesfldknskgvnekkfralmqlkymrslinpgeavgiiasqsvgepstqmtlntfnvtlgiprlreivmtasaaiktpqmtlpiwndvsdeqadtfcksiskvllsevidkvivtettarsyvihmrffdnneyseeydvskeelqnvisnqfihlleaaivkeikkqkrveannnmnkvqrdrqsaiishhrfitkynfddesgkwcefklelaadtekllmvniveeicrksiirqiphidrcvhpepengkrvlvtegvnfqamwdqeafidvdgitsndvaavlktygveaarntivneinnvfsryaisvsfrhldliadmmtrqgtylafnRqgmetstssfmkmsyettcqfltkavldnereqldspsarivvgklnnvgtgsfdvlakvpna/rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsedeisnsgylgnklsvsveqvsiakpmsndverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiiRpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnPDatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvNenigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhRgsFFaQlKtttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnRgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk/seieiesvqdqpsvavgsffkgfrapsdttfdlykkkksekdefvlhgenerleyegytdsssqasnqyvvglfnpekksiqlykapvlvskvvskssknlrgpkiksksdtrpsalrnalgeafgtkkakkaiadlernridsdkltdsaidivdsvrtaskdlptraqldeitdrptplanidatdveqiypiesiipkkelqfirvssilkeadkekklelfpyqnnskyvakkldsltqpsqmtklqllyylslllgvyenrrvnnktkllerlnsppeilvdgilsrftvikpgqfgrskdrsyfidpqnedkilcyilaiimhldnfiveitplahelnlkpskvvslfrvlgaivkgatvaqaeafgipkStaaSykiatmkvpf/tfirgpicgtdncpsrlwriidgrrtcqyghvmegdvefnddeDlgagvitrrlnlttnatgsfqssqltnsqllqqqqrqshkkfkkligheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklqlhmtstisilylasthlslpvytcdyikwictakmpyfqaseilpkswriqlpNYyvSilegsispfngqlynkialtcgmihfkeffnseiscqglllklvmqcalppefyfytkqviefeetdirnltlwertdeRHtgrvsnhaelrvlsyfmltinwmlsfdrdrqyplkwilsltesltqrtttsesigrnivkvvypdkptssdyfqwseeetleflkwmekqflptdqkiarrklykifpldreanhdgefndsthqltfiedlqeryakqtpffpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhrmn/mfevpitltnRkfaqrrklkyqyinyisrrfdriskkssdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrfvqninyrsivppfqtgsrthtakfaitylwsslincqksmlidkisewvltppfmedaevwfiyaschllkadtlsrqfvnrdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrly >6rwl_ADFM:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME organism=SIMIAN IMMUNODEFICIENCY VIRUS DNA sequence DG(S5):DC(T20) DG(S6):DC(T19) DT(S7):DA(T18) DA(S8):DT(T17) DG(S9):DC(T16) DA(S10):DT(T15) DG(S11):DC(T14) DA(S12):DT(T13) DT(S13):DA(T12) DT(S14):DA(T11) DT(S15):DA(T10) DT(S16):DA(T9) DT(S17):DA(T8) DC(S18):DG(T7) DT(S19):DA(T6) DT(S20):DA(T5) DA(S21):DT(T4) DG(S22):DC(T3) DC(S23):DG(T2) chainA ( 52) HIS51 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) GLN146 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) SER153 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) HIS156 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) GLN157 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainF chainM prot.sequence gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvkgeamHgqvdaspktwqmdcthlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfgvpynpQsqgvvESmnHQlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprrkckiik/spktwqmdcthlegkviivavhvasgyieaevlpaetgketahfllklaarWpvkhlhtdngdnftssavqavcwwaqiehtfgvvesmnhqlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttKlqnqiSKiqNFrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprrkckiikdyg/iiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdGqdlkvvprrkckiikdy/gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvk >6rwl_EILN:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME organism=SIMIAN IMMUNODEFICIENCY VIRUS DNA sequence DG(Q5):DC(W20) DG(Q6):DC(W19) DT(Q7):DA(W18) DA(Q8):DT(W17) DG(Q9):DC(W16) DA(Q10):DT(W15) DG(Q11):DC(W14) DA(Q12):DT(W13) DT(Q13):DA(W12) DT(Q14):DA(W11) DT(Q15):DA(W10) DT(Q16):DA(W9) DT(Q17):DA(W8) DC(Q18):DG(W7) DT(Q19):DA(W6) DT(Q20):DA(W5) DA(Q21):DT(W4) DG(Q22):DC(W3) DC(Q23):DG(W2) chainI ( 52) HIS51 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) GLN146 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) GLU152 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) SER153 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) HIS156 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) GLN157 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL chainN chainE prot.sequence gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvk/gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvkgeamHgqvdaspktwqmdcthlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfgvpynpQsqgvvESmnHQlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprrkckiik/spktwqmdcthlegkviivavhvasgyieaevlpaetgketahfllklaarWpvkhlhtdngdnftssavqavcwwaqiehtfgvvesmnhqlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttKlqnqiSKiqNFrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprrkckiikdyg/iiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdGqdlkvvprrkckiikdy >6rwm_ADFM:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME IN COMPLEX WITH BICTEGRAVIR organism=SIMIAN IMMUNODEFICIENCY VIRUS DNA sequence DT(S4):DA(T21) DG(S5):DC(T20) DG(S6):DC(T19) DT(S7):DA(T18) DA(S8):DT(T17) DG(S9):DC(T16) DA(S10):DT(T15) DG(S11):DC(T14) DA(S12):DT(T13) DT(S13):DA(T12) DT(S14):DA(T11) DT(S15):DA(T10) DT(S16):DA(T9) DT(S17):DA(T8) DC(S18):DG(T7) DT(S19):DA(T6) DT(S20):DA(T5) DA(S21):DT(T4) DG(S22):DC(T3) DC(S23):DG(T2) chainA ( 52) HIS51 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASP55 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) GLN146 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) GLU152 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) SER153 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) HIS156 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) GLN157 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (169) GLN234 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG263 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 44) GLU246 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM prot.sequence gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvkgeamHgqvDaspktwqmDcthlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfgvpynpQsqgvvESmnHQlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprrkckiik/spktwqmdcthlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfgvvesmnhqlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqQwkgpatliwkgegavviqdgqdlkvvprRkckiikdyg/iiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgEgavviqdgqdlkvvprrkckiikdy/gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkCqvk >6rwm_EL:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME IN COMPLEX WITH BICTEGRAVIR organism=SIMIAN IMMUNODEFICIENCY VIRUS DNA sequence DT(Q4):DA(W21) DG(Q5):DC(W20) DG(Q6):DC(W19) DT(Q7):DA(W18) DA(Q8):DT(W17) DG(Q9):DC(W16) DA(Q10):DT(W15) DG(Q11):DC(W14) DA(Q12):DT(W13) DT(Q13):DA(W12) DT(Q14):DA(W11) DT(Q15):DA(W10) DT(Q16):DA(W9) DT(Q17):DA(W8) DC(Q18):DG(W7) DT(Q19):DA(W6) DT(Q20):DA(W5) DA(Q21):DT(W4) DG(Q22):DC(W3) DC(Q23):DG(W2) chainL (169) GLN234 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG263 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvk/spktwqmdcthlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfgvvesmnhqlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqQwkgpatliwkgegavviqdgqdlkvvprRkckiikdyg >6rwm_I:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME IN COMPLEX WITH BICTEGRAVIR organism=? DNA sequence DG(W2):DC(Q23) DC(W3):DG(Q22) DT(W4):DA(Q21) DA(W5):DT(Q20) DA(W6):DT(Q19) DG(W7):DC(Q18) DA(W8):DT(Q17) DA(W9):DT(Q16) DA(W10):DT(Q15) DA(W11):DT(Q14) DA(W12):DT(Q13) DT(W13):DA(Q12) DC(W14):DG(Q11) DT(W15):DA(Q10) DC(W16):DG(Q9) DT(W17):DA(Q8) DA(W18):DT(Q7) DC(W19):DG(Q6) DC(W20):DG(Q5) chainI ( 52) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (147) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (153) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (154) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 (157) HIS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (158) GLN157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvkgeamHgqvdaspktwqmdcthlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfgvpynpQsqgvvESmnHQlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprrkckiik >6rwm_IN:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME IN COMPLEX WITH BICTEGRAVIR organism=SIMIAN IMMUNODEFICIENCY VIRUS DNA sequence DT(Q4):DA(W21) DG(Q5):DC(W20) DG(Q6):DC(W19) DT(Q7):DA(W18) DA(Q8):DT(W17) DG(Q9):DC(W16) DA(Q10):DT(W15) DG(Q11):DC(W14) DA(Q12):DT(W13) DT(Q13):DA(W12) DT(Q14):DA(W11) DT(Q15):DA(W10) DT(Q16):DA(W9) DT(Q17):DA(W8) DC(Q18):DG(W7) DT(Q19):DA(W6) DT(Q20):DA(W5) DA(Q21):DT(W4) DG(Q22):DC(W3) DC(Q23):DG(W2) chainI ( 52) HIS51 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASP55 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) GLN146 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) GLU152 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) SER153 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) HIS156 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) GLN157 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 44) GLU246 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvkgeamHgqvDaspktwqmDcthlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfgvpynpQsqgvvESmnHQlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprrkckiik/iiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgEgavviqdgqdlkvvprrkckiikdy >6rwn_AF:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME IN COMPLEX WITH DOLUTEGRAVIR organism=SIMIAN IMMUNODEFICIENCY VIRUS DNA sequence DT(S4):DA(T21) DG(S5):DC(T20) DG(S6):DC(T19) DT(S7):DA(T18) DA(S8):DT(T17) DG(S9):DC(T16) DA(S10):DT(T15) DG(S11):DC(T14) DA(S12):DT(T13) DT(S13):DA(T12) DT(S14):DA(T11) DT(S15):DA(T10) DT(S16):DA(T9) DT(S17):DA(T8) DC(S18):DG(T7) DT(S19):DA(T6) DT(S20):DA(T5) DA(S21):DT(T4) DG(S22):DC(T3) DC(S23):DG(T2) chainA ( 52) HIS51 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) HIS67 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) GLN146 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) GLU152 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) SER153 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) HIS156 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) GLN157 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 44) GLU246 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvkgeamHgqvdaspktwqmDctHlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfgvpynpQsqgvvESmnHQlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprrkckiik/iiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgEgavviqdgqdlkvvprrkckiikdy >6rwn_DM:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME IN COMPLEX WITH DOLUTEGRAVIR organism=SIMIAN IMMUNODEFICIENCY VIRUS DNA sequence DT(S4):DA(T21) DG(S5):DC(T20) DG(S6):DC(T19) DT(S7):DA(T18) DA(S8):DT(T17) DG(S9):DC(T16) DA(S10):DT(T15) DG(S11):DC(T14) DA(S12):DT(T13) DT(S13):DA(T12) DT(S14):DA(T11) DT(S15):DA(T10) DT(S16):DA(T9) DT(S17):DA(T8) DC(S18):DG(T7) DT(S19):DA(T6) DT(S20):DA(T5) DA(S21):DT(T4) DG(S22):DC(T3) DC(S23):DG(T2) chainM chainD (198) ARG263 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spktwqmdcthlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfgvvesmnhqlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprRkckiikdyg/gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvk >6rwn_EL:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME IN COMPLEX WITH DOLUTEGRAVIR organism=SIMIAN IMMUNODEFICIENCY VIRUS DNA sequence DT(Q4):DA(W21) DG(Q5):DC(W20) DG(Q6):DC(W19) DT(Q7):DA(W18) DA(Q8):DT(W17) DG(Q9):DC(W16) DA(Q10):DT(W15) DG(Q11):DC(W14) DA(Q12):DT(W13) DT(Q13):DA(W12) DT(Q14):DA(W11) DT(Q15):DA(W10) DT(Q16):DA(W9) DT(Q17):DA(W8) DC(Q18):DG(W7) DT(Q19):DA(W6) DT(Q20):DA(W5) DA(Q21):DT(W4) DG(Q22):DC(W3) DC(Q23):DG(W2) chainE chainL (198) ARG263 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvk/spktwqmdcthlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfgvvesmnhqlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprRkckiikdyg >6rwn_I:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME IN COMPLEX WITH DOLUTEGRAVIR organism=? DNA sequence DG(W2):DC(Q23) DC(W3):DG(Q22) DT(W4):DA(Q21) DA(W5):DT(Q20) DA(W6):DT(Q19) DG(W7):DC(Q18) DA(W8):DT(Q17) DA(W9):DT(Q16) DA(W10):DT(Q15) DA(W11):DT(Q14) DA(W12):DT(Q13) DT(W13):DA(Q12) DC(W14):DG(Q11) DT(W15):DA(Q10) DC(W16):DG(Q9) DT(W17):DA(Q8) DA(W18):DT(Q7) DC(W19):DG(Q6) DC(W20):DG(Q5) chainI ( 52) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (147) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (153) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (154) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 (157) HIS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (158) GLN157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvkgeamHgqvdaspktwqmdcthlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfgvpynpQsqgvvESmnHQlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprrkckiik >6rwn_IN:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME IN COMPLEX WITH DOLUTEGRAVIR organism=SIMIAN IMMUNODEFICIENCY VIRUS DNA sequence DT(Q4):DA(W21) DG(Q5):DC(W20) DG(Q6):DC(W19) DT(Q7):DA(W18) DA(Q8):DT(W17) DG(Q9):DC(W16) DA(Q10):DT(W15) DG(Q11):DC(W14) DA(Q12):DT(W13) DT(Q13):DA(W12) DT(Q14):DA(W11) DT(Q15):DA(W10) DT(Q16):DA(W9) DT(Q17):DA(W8) DC(Q18):DG(W7) DT(Q19):DA(W6) DT(Q20):DA(W5) DA(Q21):DT(W4) DG(Q22):DC(W3) DC(Q23):DG(W2) chainN ( 44) GLU246 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI ( 52) HIS51 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) HIS67 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) GLU92 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) GLN146 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) GLU152 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) SER153 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) HIS156 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) GLN157 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvkgeamHgqvdaspktwqmDctHlegkviivavhvasgyieaevlpaEtgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfgvpynpQsqgvvESmnHQlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprrkckiik/iiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgEgavviqdgqdlkvvprrkckiikdy >6rwo_AF:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME (Q148H/G140S) IN COMPLEX WITH BICTEGRAVIR organism=SIMIAN IMMUNODEFICIENCY VIRUS DNA sequence DT(S4):DA(T21) DG(S5):DC(T20) DG(S6):DC(T19) DT(S7):DA(T18) DA(S8):DT(T17) DG(S9):DC(T16) DA(S10):DT(T15) DG(S11):DC(T14) DA(S12):DT(T13) DT(S13):DA(T12) DT(S14):DA(T11) DT(S15):DA(T10) DT(S16):DA(T9) DT(S17):DA(T8) DC(S18):DG(T7) DT(S19):DA(T6) DT(S20):DA(T5) DA(S21):DT(T4) DG(S22):DC(T3) DC(S23):DG(T2) chainA ( 52) HIS51 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) HIS67 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) GLN146 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) GLU152 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) SER153 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) HIS156 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) GLN157 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 44) GLU246 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvkgeamHgqvdaspktwqmDctHlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfsvpynpQshgvvESmnHQlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprrkckiik/iiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgEgavviqdgqdlkvvprrkckiikdy >6rwo_DM:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME (Q148H/G140S) IN COMPLEX WITH BICTEGRAVIR organism=SIMIAN IMMUNODEFICIENCY VIRUS DNA sequence DT(S4):DA(T21) DG(S5):DC(T20) DG(S6):DC(T19) DT(S7):DA(T18) DA(S8):DT(T17) DG(S9):DC(T16) DA(S10):DT(T15) DG(S11):DC(T14) DA(S12):DT(T13) DT(S13):DA(T12) DT(S14):DA(T11) DT(S15):DA(T10) DT(S16):DA(T9) DT(S17):DA(T8) DC(S18):DG(T7) DT(S19):DA(T6) DT(S20):DA(T5) DA(S21):DT(T4) DG(S22):DC(T3) DC(S23):DG(T2) chainM chainD (169) GLN234 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG263 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spktwqmdcthlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfsvvesmnhqlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqQwkgpatliwkgegavviqdgqdlkvvprRkckiikdyg/gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvk >6rwo_EL:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME (Q148H/G140S) IN COMPLEX WITH BICTEGRAVIR organism=SIMIAN IMMUNODEFICIENCY VIRUS DNA sequence DG(W2):DC(Q23) DC(W3):DG(Q22) DT(W4):DA(Q21) DA(W5):DT(Q20) DA(W6):DT(Q19) DG(W7):DC(Q18) DA(W8):DT(Q17) DA(W9):DT(Q16) DA(W10):DT(Q15) DA(W11):DT(Q14) DA(W12):DT(Q13) DT(W13):DA(Q12) DC(W14):DG(Q11) DT(W15):DA(Q10) DC(W16):DG(Q9) DT(W17):DA(Q8) DA(W18):DT(Q7) DC(W19):DG(Q6) DC(W20):DG(Q5) chainE chainL (169) GLN234 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvk/spktwqmdcthlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfsvvesmnhqlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqQwkgpatliwkgegavviqdgqdlkvvprrkckiikdyg >6rwo_IN:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=SIVRCM INTASOME (Q148H/G140S) IN COMPLEX WITH BICTEGRAVIR organism=SIMIAN IMMUNODEFICIENCY VIRUS DNA sequence DG(W2):DC(Q23) DC(W3):DG(Q22) DT(W4):DA(Q21) DA(W5):DT(Q20) DA(W6):DT(Q19) DG(W7):DC(Q18) DA(W8):DT(Q17) DA(W9):DT(Q16) DA(W10):DT(Q15) DA(W11):DT(Q14) DA(W12):DT(Q13) DT(W13):DA(Q12) DC(W14):DG(Q11) DT(W15):DA(Q10) DC(W16):DG(Q9) DT(W17):DA(Q8) DA(W18):DT(Q7) DC(W19):DG(Q6) DC(W20):DG(Q5) chainN chainI ( 52) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (147) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (153) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (154) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 (157) HIS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (158) GLN157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence gfldgiekaqeehekyhnnwramaedfqipqvvakeivaqcpkcqvkgeamHgqvdaspktwqmdcthlegkviivavhvasgyieaevlpaetgketahfllklaarwpvkhlhtdngdnftssavqavcwwaqiehtfsvpynpQshgvvESmnHQlktiitqirdqaekietavqmavlihnfkrkggiggysageriidiiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdgqdlkvvprrkckiik/iiasdlqttklqnqiskiqnfrvyfregrdqqwkgpatliwkgegavviqdGqdlkvvprrkckiikdy >6ryd_EF:Homeodomain-like; title=WUS-HD BOUND TO TGAA DNA organism=Arabidopsis thaliana DNA sequence DC(H1):DG(G16) DG(H2):DC(G15) DT(H3):DA(G14) DT(H4):DA(G13) DC(H5):DG(G12) DA(H6):DT(G11) DT(H7):DA(G10) DT(H8):DA(G9) DC(H9):DG(G8) DA(H10):DT(G7) DT(H11):DA(G6) DA(H12):DT(G5) DC(H13):DG(G4) DA(H14):DT(G3) DC(H15):DG(G2) DT(H16):DA(G1) chainE ( 5) ARG38 0 0 0 0 8 7 1 0 0 0 0 0 0 0 0 0 ( 53) TYR86 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLN89 5 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ASN90 0 0 2 11 5 0 0 0 0 0 0 0 0 0 0 0 ( 60) ALA93 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ARG94 0 0 0 2 13 18 0 0 0 0 0 0 0 0 0 0 chainF ( 1) ARG38 0 0 0 0 0 0 0 0 1 6 5 0 0 0 0 0 ( 48) PHE85 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR86 0 0 0 0 0 2 7 3 0 0 0 0 0 0 0 0 ( 52) GLN89 0 0 0 2 8 8 1 0 0 0 0 0 0 0 0 0 ( 53) ASN90 0 0 0 0 0 0 1 13 6 0 0 0 0 0 0 0 ( 56) ALA93 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 57) ARG94 0 0 0 0 0 0 0 3 13 23 0 0 0 0 0 0 prot.sequence qtstRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkARerqkkrf/RwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvFYwfQNhkARe >6ryd_F:Homeodomain-like; title=WUS-HD BOUND TO TGAA DNA organism=Arabidopsis thaliana DNA sequence DC(H1):DG(G16) DG(H2):DC(G15) DT(H3):DA(G14) DT(H4):DA(G13) DC(H5):DG(G12) DA(H6):DT(G11) DT(H7):DA(G10) DT(H8):DA(G9) DC(H9):DG(G8) DA(H10):DT(G7) DT(H11):DA(G6) DA(H12):DT(G5) DC(H13):DG(G4) DA(H14):DT(G3) DC(H15):DG(G2) DT(H16):DA(G1) chainF ( 1) ARG38 0 0 0 0 0 0 0 0 1 6 5 0 0 0 0 0 ( 48) PHE85 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR86 0 0 0 0 0 2 7 3 0 0 0 0 0 0 0 0 ( 52) GLN89 0 0 0 2 8 8 1 0 0 0 0 0 0 0 0 0 ( 53) ASN90 0 0 0 0 0 0 1 13 6 0 0 0 0 0 0 0 ( 56) ALA93 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 57) ARG94 0 0 0 0 0 0 0 3 13 23 0 0 0 0 0 0 prot.sequence RwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvFYwfQNhkARe >6ryi_AB:Homeodomain-like; title=WUS-HD BOUND TO G-BOX DNA organism=Arabidopsis thaliana DNA sequence DC(G1):DG(F16) DC(G2):DG(F15) DC(G3):DG(F14) DA(G4):DT(F13) DT(G5):DA(F12) DC(G6):DG(F11) DA(G7):DT(F10) DC(G8):DG(F9) DG(G9):DC(F8) DT(G10):DA(F7) DG(G11):DC(F6) DA(G12):DT(F5) DC(G13):DG(F4) DG(G14):DC(F3) DA(G15):DT(F2) DC(G16):DG(F1) chainA ( 2) ARG38 0 0 0 0 0 0 0 0 7 5 3 0 0 0 0 0 ( 50) TYR86 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 53) GLN89 0 0 0 0 0 0 0 0 0 0 0 0 2 2 7 0 ( 54) ASN90 0 0 0 0 0 0 0 0 0 0 4 10 1 0 0 0 ( 58) ARG94 0 0 0 0 0 0 0 0 0 12 11 4 0 0 0 0 chainB ( 2) ARG38 0 0 0 0 0 1 3 5 0 0 0 0 0 0 0 0 ( 50) TYR86 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 53) GLN89 0 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ASN90 0 0 0 1 13 5 0 0 0 0 0 0 0 0 0 0 ( 58) ARG94 0 0 0 0 2 8 14 0 0 0 0 0 0 0 0 0 prot.sequence tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkaRe/tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkaRe >6ryi_D:Homeodomain-like; title=WUS-HD BOUND TO G-BOX DNA organism=Arabidopsis thaliana DNA sequence DC(I3):DG(H14) DA(I4):DT(H13) DT(I5):DA(H12) DC(I6):DG(H11) DA(I7):DT(H10) DC(I8):DG(H9) DG(I9):DC(H8) DT(I10):DA(H7) DG(I11):DC(H6) DA(I12):DT(H5) DC(I13):DG(H4) DG(I14):DC(H3) DA(I15):DT(H2) DC(I16):DG(H1) chainD ( 2) ARG38 0 0 0 0 0 0 13 7 7 0 0 0 0 0 ( 50) TYR86 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 53) GLN89 0 0 0 0 0 0 0 0 0 0 1 2 7 0 ( 54) ASN90 0 0 0 0 0 0 0 0 2 11 0 0 0 0 ( 58) ARG94 0 0 0 0 0 0 0 17 11 5 0 0 0 0 prot.sequence tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkaRer >6ryi_DE:Homeodomain-like; title=WUS-HD BOUND TO G-BOX DNA organism=Arabidopsis thaliana DNA sequence DG(H1):DC(I16) DT(H2):DA(I15) DC(H3):DG(I14) DG(H4):DC(I13) DT(H5):DA(I12) DC(H6):DG(I11) DA(H7):DT(I10) DC(H8):DG(I9) DG(H9):DC(I8) DT(H10):DA(I7) DG(H11):DC(I6) DA(H12):DT(I5) DT(H13):DA(I4) DG(H14):DC(I3) chainD ( 2) ARG38 0 0 0 0 0 7 7 13 0 0 0 0 0 0 ( 50) TYR86 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 53) GLN89 0 7 2 1 0 0 0 0 0 0 0 0 0 0 ( 54) ASN90 0 0 0 0 11 2 0 0 0 0 0 0 0 0 ( 58) ARG94 0 0 0 0 5 11 17 0 0 0 0 0 0 0 chainE ( 2) ARG38 0 0 0 0 0 0 0 0 4 11 6 0 0 0 ( 50) TYR86 0 0 0 0 0 0 0 0 0 0 0 2 5 0 ( 53) GLN89 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 54) ASN90 0 0 0 0 0 0 0 0 0 0 3 11 0 0 ( 58) ARG94 0 0 0 0 0 0 0 0 0 11 11 1 0 0 prot.sequence tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkaRer/tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkaRer >6ryl_A:Homeodomain-like; title=WUS-HD BOUND TO TAAT DNA organism=Arabidopsis thaliana DNA sequence DC(F1):DG(G16) DA(F2):DT(G15) DC(F3):DG(G14) DA(F4):DT(G13) DA(F5):DT(G12) DC(F6):DG(G11) DC(F7):DG(G10) DC(F8):DG(G9) DA(F9):DT(G8) DT(F10):DA(G7) DT(F11):DA(G6) DA(F12):DT(G5) DA(F13):DT(G4) DC(F14):DG(G3) DA(F15):DT(G2) DC(F16):DG(G1) chainA ( 48) TYR86 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 51) GLN89 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 ( 52) ASN90 0 0 0 7 10 1 0 0 0 0 0 0 0 0 0 0 ( 56) ARG94 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkaRerqkk >6ryl_ABC:Homeodomain-like; title=WUS-HD BOUND TO TAAT DNA organism=Arabidopsis thaliana DNA sequence DG(G1):DC(F16) DT(G2):DA(F15) DG(G3):DC(F14) DT(G4):DA(F13) DT(G5):DA(F12) DA(G6):DT(F11) DA(G7):DT(F10) DT(G8):DA(F9) DG(G9):DC(F8) DG(G10):DC(F7) DG(G11):DC(F6) DT(G12):DA(F5) DT(G13):DA(F4) DG(G14):DC(F3) DT(G15):DA(F2) DG(G16):DC(F1) chainA ( 48) TYR86 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 51) GLN89 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 ( 52) ASN90 0 0 0 0 0 0 0 0 0 0 1 10 7 0 0 0 ( 56) ARG94 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 chainB ( 2) ARG38 0 0 12 7 4 0 0 0 0 0 0 0 0 0 0 0 ( 50) TYR86 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 ( 54) ASN90 0 0 0 0 10 13 1 0 0 0 0 0 0 0 0 0 ( 57) ALA93 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 58) ARG94 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG96 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainC ( 2) ARG38 0 0 0 0 1 5 5 1 0 0 0 0 0 0 0 0 ( 50) TYR86 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) GLN89 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ASN90 0 0 2 13 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkaRerqkk/tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfqNhkAReRqkkr/tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkarerqkkr >6ryl_DE:Homeodomain-like; title=WUS-HD BOUND TO TAAT DNA organism=Arabidopsis thaliana DNA sequence DG(I1):DC(H16) DT(I2):DA(H15) DG(I3):DC(H14) DT(I4):DA(H13) DT(I5):DA(H12) DA(I6):DT(H11) DA(I7):DT(H10) DT(I8):DA(H9) DG(I9):DC(H8) DG(I10):DC(H7) DG(I11):DC(H6) DT(I12):DA(H5) DT(I13):DA(H4) DG(I14):DC(H3) DT(I15):DA(H2) DG(I16):DC(H1) chainD ( 2) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 3 6 5 0 ( 50) TYR86 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 ( 53) GLN89 0 0 0 0 0 0 0 0 1 3 5 0 0 0 0 0 ( 54) ASN90 0 0 0 0 0 0 0 0 0 0 2 12 7 0 0 0 chainE ( 2) ARG38 0 0 0 12 9 5 0 0 0 0 0 0 0 0 0 0 ( 50) TYR86 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 53) GLN89 0 0 0 0 0 0 0 2 8 2 0 0 0 0 0 0 ( 54) ASN90 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 prot.sequence tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkarerqkk/tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkarerqkkr >6ryu_V:P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like; title=NUCLEOSOME-CHD4 COMPLEX STRUCTURE (TWO CHD4 COPIES) organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) DA(I73):DT(J-73) DG(I74):DC(J-74) DG(I75):DC(J-75) DC(I76):DG(J-76) chainV (623) ARG1127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dhhmefcrvckdggellccdtcpssyhihclnpplpeipngewlcprctcpalkgkvqkiliwkwgperqffvkwqgmsywhcswvselqlelhcqvmfrnyqrkndmdeppseeksrkrknkdpkfaemeerfyrygikpewmmihrilnhsvdkkghvhylikwrdlpydqaswesedveiqdydlfkqsywnhrelmtvdptvkyerqpeyldatggtlhpyqmeglnwlrfswaqgtdtilademglgktvqtavflyslykeghskgpflvsaplstiinwerefemwapdmyvvtyvgdkdsraiirenefsfednairggkkasrmkkeasvkfhvlltsyelitidmailgsidwaclivdeahrlknnqskffrvlngyslqhkllltgtplqnnleelfhllnfltperfhnlegfleefadiakedqikklhdmlgphmlrrlkadvfknmpsktelivrvelspmqkkyykyiltrnfealnargggnqvsllnvvmdlkkccnhpylfpvaameapkmpngmydgsalirasgkllllqkmlknlkegghrvlifsqmtkmldlledflehegykyeridggitgnmrqeaidrfnapgaqqfcfllstRagglginlatadtviiydsdwnphndiqafsrahrigqnkkvmiyrfvtrasveeritqvakkkmmlthlvvrxxxxxxxxxxxx >6s01_E:Histone-fold; title=STRUCTURE OF LEDGF PWWP DOMAIN BOUND H3K36 METHYLATED NUCLEOSOME organism=? DNA sequence DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DC(I70):DG(J-70) DT(I71):DA(J-71) DG(I72):DC(J-72) DG(I74):DC(J-74) DC(I75):DG(J-75) DA(I76):DT(J-76) DT(I77):DA(J-77) chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG42 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger >6s16_B:Ribonuclease_H-like; title=T. THERMOPHILUS RUVC IN COMPLEX WITH HOLLIDAY JUNCTION SUBSTRATE organism=? DNA sequence DG(F22):DG(C12) DA(F23):DT(C11) DA(F24):DT(C10) DA(F25):DT(C9) DG(F26):DC(C8) DC(F27):DG(C7) DC(F28):DG(C6) DG(F29):DC(C5) DA(F30):DT(C4) DT(F31):DA(C3) DT(F32):DA(C2) DG(F33):DC(C1) chainB ( 73) PHE74 0 0 19 0 0 0 0 0 0 0 0 0 ( 75) ARG76 0 0 4 35 0 0 0 0 0 0 0 0 ( 76) GLN77 0 0 0 6 2 0 0 0 0 0 0 0 ( 79) LEU80 0 0 0 2 9 0 0 0 0 0 0 0 prot.sequence hmvvagidpgithlglgvvavkgalkarllhgevvktspqepakervgriharvlevlhrfrpeavaveeqfFyRQneLaykvgwalgavlvaafeagvpvyaygpmqvkqalaghghaakeevalmvrgilglkeaprpshladalaialthafyarmgtakpl >6s1n_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HUMAN POLYMERASE DELTA HOLOENZYME CONFORMER 2 organism=HOMO SAPIENS DNA sequence DC(P3):DG(T23) DT(P4):DA(T22) DA(P5):DT(T21) DT(P6):DA(T20) DG(P7):DC(T19) DA(P8):DT(T18) DC(P9):DG(T17) DC(P10):DG(T16) DA(P11):DT(T15) DT(P12):DA(T14) DG(P13):DC(T13) DA(P14):DT(T12) DT(P15):DA(T11) DT(P16):DA(T10) DA(P17):DT(T9) DC(P18):DG(T8) DG(P19):DC(T7) DA(P20):DT(T6) DA(P21):DT(T5) DT(P22):DA(T4) DT(P23):DA(T3) DG(P24):DC(T2) DOC(P25):DG(T1) TTP(T101):DA(T0) chainA (354) GLN440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 (459) GLN551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (512) SER604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (513) SER605 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (515) TYR607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (575) ARG667 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (602) LYS694 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 (603) VAL695 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (606) ASN698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 (607) SER699 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (609) TYR701 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (665) ASP757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (715) LYS807 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 (716) ARG808 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (741) ARG833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 prot.sequence rwlrptppaldpqteplifqqleidhyvgpaqpvsvpvlrafgvtdegfsvcchihgfapyfytpappgfgpehmgdlqrelnlaisrdsrggreltgpavlavelcsresmfgyhghgpspflritvalprlvaparrlleqgirvaglgtpsfapyeanvdfeirfmvdtdivgcnwlelpagkyalrlkekatqcqleadvlwsdvvshppegpwqriaplrvlsfdiecagrkgifpeperdpviqicslglrwgepepflrlaltlrpcapilgakvqsyekeedllqawstfirimdpdvitgyniqnfdlpylisraqtlkvqtfpflgrvaglcsnirdssfqskQtgrrdtkvvsmvgrvqmdmlqvllreyklrsytlnavsfhflgehsiitdlqngndqtrrrlavyclkdaylplrllerlmvlvnavemarvtgvplsyllsrgQqvkvvsqllrqamhegllmpvvkseggedytgatvieplkgyydvpiatldfsslypsimmahnlcyttllrpgtaqklgltedqfirtptgdefvktsvrkgllpqilenllsarkrakaelaketdplrrqvldgrqlalkVsaNSvygftgaqvgklpcleisqsvtgfgrqmiektkqlveskytvengystsakvvygdtdsvmcrfgvssvaeamalgreaadwvsghfpspirlefekvyfpylliskKRyagllfssrpdahdrmdckgleavRrdncplvanlvtaslrrllidrdpegavahaqdvisdllcnridisqlvitkeltraasdyagkqahvelaermrkrdpgsapslgdrvpyviisaakgvaaymksedplfvlehslpidtqyyleqqlakpllrifepilgegraeavllrgdhtrcktvlgllafakrrnccigcrtvlshqgavcefcqpreselyqkevshlnaleerfsrlwtqcqrcqgslhedvictsrdcpifymrkkvrkdledqeqllrrfgppgpeaw >6s1o_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HUMAN POLYMERASE DELTA HOLOENZYME CONFORMER 3 organism=HOMO SAPIENS DNA sequence DC(P3):DG(T23) DT(P4):DA(T22) DA(P5):DT(T21) DT(P6):DA(T20) DG(P7):DC(T19) DA(P8):DT(T18) DC(P9):DG(T17) DC(P10):DG(T16) DA(P11):DT(T15) DT(P12):DA(T14) DG(P13):DC(T13) DA(P14):DT(T12) DT(P15):DA(T11) DT(P16):DA(T10) DA(P17):DT(T9) DC(P18):DG(T8) DG(P19):DC(T7) DA(P20):DT(T6) DA(P21):DT(T5) DT(P22):DA(T4) DT(P23):DA(T3) DG(P24):DC(T2) DOC(P25):DG(T1) TTP(T101):DA(T0) chainA (354) GLN440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 25 (459) GLN551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (512) SER604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (513) SER605 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (515) TYR607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (575) ARG667 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (602) LYS694 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 (606) ASN698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (607) SER699 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (609) TYR701 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (665) ASP757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (741) ARG833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 prot.sequence rwlrptppaldpqteplifqqleidhyvgpaqpvsvpvlrafgvtdegfsvcchihgfapyfytpappgfgpehmgdlqrelnlaisrdsrggreltgpavlavelcsresmfgyhghgpspflritvalprlvaparrlleqgirvaglgtpsfapyeanvdfeirfmvdtdivgcnwlelpagkyalrlkekatqcqleadvlwsdvvshppegpwqriaplrvlsfdiecagrkgifpeperdpviqicslglrwgepepflrlaltlrpcapilgakvqsyekeedllqawstfirimdpdvitgyniqnfdlpylisraqtlkvqtfpflgrvaglcsnirdssfqskQtgrrdtkvvsmvgrvqmdmlqvllreyklrsytlnavsfhflgehsiitdlqngndqtrrrlavyclkdaylplrllerlmvlvnavemarvtgvplsyllsrgQqvkvvsqllrqamhegllmpvvkseggedytgatvieplkgyydvpiatldfsslypsimmahnlcyttllrpgtaqklgltedqfirtptgdefvktsvrkgllpqilenllsarkrakaelaketdplrrqvldgrqlalkvsanSvygftgaqvgklpcleisqsvtgfgrqmiektkqlveskytvengystsakvvygdtdsvmcrfgvssvaeamalgreaadwvsghfpspirlefekvyfpylliskkryagllfssrpdahdrmdckgleavRrdncplvanlvtaslrrllidrdpegavahaqdvisdllcnridisqlvitkeltraasdyagkqahvelaermrkrdpgsapslgdrvpyviisaakgvaaymksedplfvlehslpidtqyyleqqlakpllrifepilgegraeavllrgdhtrcktvlgllafakrrnccigcrtvlshqgavcefcqpreselyqkevshlnaleerfsrlwtqcqrcqgslhedvictsrdcpifymrkkvrkdledqeqllrrfgppgpeaw >6s3h_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF HELICASE PIF1 FROM THERMUS OSHIMAI IN COMPLEX WITH ADP-ALF4 AND (DT)7DS11BP organism=Thermus oshimai JL-2 DNA sequence DT(D3) DT(D4) DT(D5) DT(D6) DT(D7) DT(D8) chainA ( 65) HIS131 0 0 0 4 0 0 ( 72) ALA138 0 0 0 7 5 0 (150) VAL216 0 12 18 0 0 0 (152) PRO218 0 2 2 0 0 0 (236) ARG302 8 0 0 0 0 0 (266) PHE332 0 0 0 0 0 12 (272) PRO338 0 0 0 0 4 3 (330) TRP396 0 0 0 0 0 10 (332) LYS398 0 0 0 0 0 9 (372) PHE451 28 4 0 0 0 0 prot.sequence glsseqqraflavtqtphpahlitgpagtgkttllyalqefykgravtlaptgtaalqargqtvHsffrfpArllryrhpedirppgphsplrkaieqmevlildevgmvRvdlleamdwalrktrkrleepfggvkvlllgdtrqlEpVvPggeEalyiartwggpfffqahvweevalrvhrlwesqrqredplfaellkrlrqgdpqaletlnraavrpdggeepgtliltpRrkeadalnlkrlealpgkpleyqaqvkgeFaetdfPteaaltlkkgaqvillrndplgeyfngdlgwvedleaealavrlkrngrrvvirpfvWeKivvvgtfrqvpvrlawaltvhkaqgltldkvhlelgrglFahgqlyvaltrvrrlqdlslsrpiaptellwrpevevfetriqegiwqks >6s48_A: title=AVAII RESTRICTION ENDONUCLEASE IN COMPLEX WITH PARTIALLY CLEAVED DSDNA organism=NOSTOC SP. PCC 7120 = FACHB-418 DNA sequence DG(C1):DC(E11) DA(C2):DT(E10) DT(C3):DA(E9) DG(C4):DC(E8) DG(C5):DC(E7) DT(C6):DA(E6) DC(C7):DG(E5) DC(C8):DG(D4) DT(C9):DA(D3) DA(C10):DT(D2) DC(C11):DG(D1) chainA ( 43) LYS46 5 6 3 0 0 0 0 0 0 0 0 (113) ASN116 0 0 0 1 6 0 0 0 0 0 0 (164) ASN167 0 0 0 0 0 0 0 10 1 0 0 (165) THR168 0 0 0 0 0 3 0 0 0 0 0 (167) ASN170 0 0 0 0 0 2 10 4 0 0 0 (168) SER171 0 0 0 0 0 0 0 5 2 0 0 prot.sequence kfiqnaaeiakkamdsvdpslsekftivirfltdnpdaasalKgkersivgteeyiiasatnfkkgrdprtplppstipdemvsvilnkyfevpseelekaeewhrlsmgaeNivgdlleryiaeviephgwiwcsgSmvravdfiycdsenvwqslqvknrdNTeNSsSaairhgtpikkwfrtfskkrgdnwdkfpslegkenlsekgfklyvekylsalraikalehhhhhh >6s48_AB: title=AVAII RESTRICTION ENDONUCLEASE IN COMPLEX WITH PARTIALLY CLEAVED DSDNA organism=NOSTOC SP. PCC 7120 = FACHB-418 DNA sequence DG(C1):DC(E11) DA(C2):DT(E10) DT(C3):DA(E9) DG(C4):DC(E8) DG(C5):DC(E7) DT(C6):DA(E6) DC(C7):DG(E5) DC(C8):DG(D4) DT(C9):DA(D3) DA(C10):DT(D2) DC(C11):DG(D1) chainA ( 43) LYS46 5 6 3 0 0 0 0 0 0 0 0 (113) ASN116 0 0 0 1 6 0 0 0 0 0 0 (164) ASN167 0 0 0 0 0 0 0 10 1 0 0 (165) THR168 0 0 0 0 0 3 0 0 0 0 0 (167) ASN170 0 0 0 0 0 2 10 4 0 0 0 (168) SER171 0 0 0 0 0 0 0 5 2 0 0 chainB ( 43) LYS46 0 0 0 0 0 0 0 0 4 4 3 (113) ASN116 0 0 0 0 0 0 10 5 0 0 0 (164) ASN167 0 0 0 11 1 0 0 0 0 0 0 (165) THR168 0 0 0 0 0 2 0 0 0 0 0 (167) ASN170 0 0 0 5 12 5 0 0 0 0 0 (168) SER171 0 0 4 4 0 0 0 0 0 0 0 (188) LYS191 0 2 0 0 0 0 0 0 0 0 0 prot.sequence kfiqnaaeiakkamdsvdpslsekftivirfltdnpdaasalKgkersivgteeyiiasatnfkkgrdprtplppstipdemvsvilnkyfevpseelekaeewhrlsmgaeNivgdlleryiaeviephgwiwcsgSmvravdfiycdsenvwqslqvknrdNTeNSsSaairhgtpikkwfrtfskkrgdnwdkfpslegkenlsekgfklyvekylsalraikalehhhhhh/kfiqnaaeiakkamdsvdpslsekftivirfltdnpdaasalKgkersivgteeyiiasatnfkkgrdprtplppstipdemvsvilnkyfevpseelekaeewhrlsmgaeNivgdlleryiaeviephgwiwcsgsmvravdfiycdsenvwqslqvknrdNTeNSssaairhgtpikkwfrtfsKkrgdnwdkfpslegkenlsekgfklyvekylsalraikal >6s6h_A:KorB_DNA-binding_domain-like; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF THE CHROMOSOME- PARTITIONING PROTEIN PARB COMPLEXED TO THE CENTROMERIC PARS SITE organism=Caulobacter vibrioides NA1000 DNA sequence DG(D1):DC(C20) DA(D2):DT(C19) DT(D3):DA(C18) DG(D4):DC(C17) DT(D5):DA(C16) DT(D6):DA(C15) DT(D7):DA(C14) DC(D8):DG(C13) DA(D9):DT(C12) DC(D10):DG(C11) DG(D11):DC(C10) DT(D12):DA(C9) DG(D13):DC(C8) DA(D14):DT(C7) DA(D15):DT(C6) DA(D16):DT(C5) DC(D17):DG(C4) DA(D18):DT(C3) DT(D19):DA(C2) DC(D20):DG(C1) chainA ( 38) GLN162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 48) SER172 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 49) ARG173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 26 0 0 ( 50) SER174 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 5 0 0 0 0 ( 53) ALA177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 54) ASN178 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 9 0 0 0 0 ( 57) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 80) ARG204 0 0 0 0 0 0 0 0 0 0 0 1 14 9 3 0 0 0 0 0 (102) VAL226 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 (103) ARG227 0 0 0 0 0 0 0 0 0 0 8 10 9 0 0 0 0 0 0 0 (106) GLU230 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 prot.sequence mlavleigiienvqradlnvleealsykvlmekfertQeniaqtigkSRShvANtmRllalpdevqsylvsgeltaghaRaiaaaadpvalakqiiegglsVRetEalarkapkskggrpp >6s6h_AB:KorB_DNA-binding_domain-like; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF THE CHROMOSOME- PARTITIONING PROTEIN PARB COMPLEXED TO THE CENTROMERIC PARS SITE organism=Caulobacter vibrioides NA1000 DNA sequence DG(D1):DC(C20) DA(D2):DT(C19) DT(D3):DA(C18) DG(D4):DC(C17) DT(D5):DA(C16) DT(D6):DA(C15) DT(D7):DA(C14) DC(D8):DG(C13) DA(D9):DT(C12) DC(D10):DG(C11) DG(D11):DC(C10) DT(D12):DA(C9) DG(D13):DC(C8) DA(D14):DT(C7) DA(D15):DT(C6) DA(D16):DT(C5) DC(D17):DG(C4) DA(D18):DT(C3) DT(D19):DA(C2) DC(D20):DG(C1) chainA ( 38) GLN162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 48) SER172 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 49) ARG173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 26 0 0 ( 50) SER174 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 5 0 0 0 0 ( 53) ALA177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 54) ASN178 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 9 0 0 0 0 ( 57) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 80) ARG204 0 0 0 0 0 0 0 0 0 0 0 1 14 9 3 0 0 0 0 0 (102) VAL226 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 (103) ARG227 0 0 0 0 0 0 0 0 0 0 8 10 9 0 0 0 0 0 0 0 (106) GLU230 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 chainB ( 38) GLN162 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) SER172 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG173 0 0 26 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER174 0 0 0 0 5 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ALA177 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ASN178 0 0 0 0 10 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG181 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG204 0 0 0 0 0 3 8 14 1 0 0 0 0 0 0 0 0 0 0 0 (102) VAL226 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 (103) ARG227 0 0 0 0 0 0 0 9 10 8 0 0 0 0 0 0 0 0 0 0 (106) GLU230 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlavleigiienvqradlnvleealsykvlmekfertQeniaqtigkSRShvANtmRllalpdevqsylvsgeltaghaRaiaaaadpvalakqiiegglsVRetEalarkapkskggrpp/mlavleigiienvqradlnvleealsykvlmekfertQeniaqtigkSRShvANtmRllalpdevqsylvsgeltaghaRaiaaaadpvalakqiiegglsVRetEalarkapnlsagkskggrpprvkdklaaalehhh >6s85_AD:Metallo-dependent_phosphatases;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CUTTING STATE OF THE E. COLI MRE11-RAD50 (SBCCD) HEAD COMPLEX BOUND TO ADP AND DSDNA. organism=ESCHERICHIA COLI DNA sequence DC(F45):DG(E34) DC(F46):DG(E33) DA(F47):DT(E32) DG(F48):DC(E31) DA(F49):DT(E30) DA(F50):DT(E29) DG(F51):DC(E28) DC(F52):DG(E27) DG(F53):DC(E26) DT(F54):DA(E25) DT(F55):DA(E24) DA(F56):DT(E23) DA(F57):DT(E22) DT(F58):DA(E21) DG(F59):DC(E20) DT(F60):DA(E19) DC(F61):DG(E18) DT(F62):DA(E17) DG(F63):DC(E16) DG(F64):DC(E15) DC(F65):DG(E14) DT(F66):DA(E13) DT(F67):DA(E12) DC(F68):DG(E11) DT(F69):DA(E10) DG(F70):DC(E9) DA(F71):DT(E8) DT(F72):DA(E7) DA(F73):DT(E6) DA(F74):DT(E5) DA(F75):DT(E4) chainD ( 66) GLN66 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) GLN110 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA prot.sequence mrilhtsdwhlgqnfysksreaehqafldwlletaqthqvdaiivagdvfdtgsppsyartlynrfvvnlqqtgchlvvlagnsdsvatlnesrdimaflnttvvasaghapqilprrdgtpgavlcpipflrprdiitsqaglngiekqqhllaaitdyyqqhyadacklrgdqplpiiatghlttvtldafpaqnfppadyialghihraqiiggmehvrycgspiplsfdecgkskyvhlvtfsngklesvenlnvpvtqpmavlkgdlasitaqleqwrdvsqeppvwldieittdeylhdiqrkiqalteslpvevllvrrsreqrervlasqqretlselsveevfnrrlaleeldesqqqrlqhlftttlhtla/mkilslrlknlnslkgewkidftrepfasnglfaitgptgagkttlldaiclalyhetprlsnvsQsqndlmtrdtaeclaevefevkgeayrafwsqnrarnqpdgnlQvprvelarcadgkiladkvkdkleltatltgldygrftrsmllsqgqfaaflnakpkeraelleeltgteiygqisamvfeqhksarteletqqvedwgylnsligskegdkfrkfaqgltldnlvhlanqqltrlhgryllqrkasealevevvdtwqadavrdtrtlsggesflvslalalalsdlvshktridslfldegfgtldsetldtaldaldalnasgktigvishveamkeripvqikvkkinglgysklestfav >6s85_C:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CUTTING STATE OF THE E. COLI MRE11-RAD50 (SBCCD) HEAD COMPLEX BOUND TO ADP AND DSDNA. organism=ESCHERICHIA COLI DNA sequence DC(F45) DC(F46) DA(F47) DG(F48) DA(F49) DA(F50) DG(F51) DC(F52) DG(F53) DT(F54) DT(F55) DA(F56) DA(F57) DT(F58) DG(F59) DT(F60) DC(F61) DT(F62) DG(F63) DG(F64) DC(F65) DT(F66) DT(F67) DC(F68) DT(F69) DG(F70) DA(F71) DT(F72) DA(F73) DA(F74) DA(F75) DG(F76) chainC (217) LYS890 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence mkilslrlknlnslkgewkidftrepfasnglfaitgptgagkttlldaiclalyhetprlsnvsqsqndlmtrdtaeclaevefevkgeayrafwsqnrarnqpdgnlqvprvelarcadgkiladkvkdkleltatltgldygrftrsmllsqgqfaaflnakpkeraelleeltgteiygqisamvfeqhksarteleqqvedwgylnsligsKegdkfrkfaqgltldnlvhlanqqltrlhgryllqrkasealevevvdtwqadavrdtrtlsggesflvslalalalsdlvshktridslfldegfgtldsetldtaldaldalnasgktigvishveamkeripvqikvkkinglgysklestfav >6sa1_A: title=POST CATALYTIC COMPLEX OF PRIM-POLC FROM MYCOBACTERIUM SMEGMATIS WITH GAPPED DNA AND 3'-DUTP organism=? DNA sequence DG(B1):DC(C7) DC(B2):DG(C6) DG(B3):DC(C5) DA(B4):DT(C4) DG(B5):DC(C3) DC(B6):DG(C2) DG(B7):DC(C1) chainA ( 60) ARG63 14 0 0 0 0 0 0 ( 62) PRO65 10 0 0 0 0 0 0 ( 68) GLU71 8 0 0 0 0 0 0 ( 70) ILE73 23 0 0 0 0 0 0 ( 72) GLN75 1 0 0 0 0 0 0 prot.sequence saateldvdgvkvrftnpdkvyfpklgkngtkgklveyylsvasgpmlallrdrpvhlqRfPdgiegEeIyQkrvpqkhpdyletcvvtfpsgrtadalkithpssiiwaaqmgtvtlhpwqvrcpdtehpdelrvdldpqpgtgfkeartvacdvlkplldelglvgypktsggrgvhvflrikpqwdfievrragialareverrapdavttswwkeergerlfidynqnardrtfasaysvrktpiatvsmplswdelrnadpddytmntvpdllagrddpwadidsvqqslgplldlvaadeerglgdlpyppnypkmpgeppr >6sdg_AB:DNA-binding_pseudobarrel_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF M. POLYMORPHA AUXIN RESPONSE FACTOR 2 (MPARF2) IN COMPLEX WITH HIGH AFFINITY DNA organism=Marchantia polymorpha DNA sequence DT(C0):DA(D20) DT(C1):DA(D19) DG(C2):DC(D18) DT(C3):DA(D17) DC(C4):DG(D16) DG(C5):DC(D15) DG(C6):DC(D14) DC(C7):DG(D13) DG(C8):DC(D12) DA(C9):DT(D11) DT(C10):DA(D10) DT(C11):DA(D9) DC(C12):DG(D8) DG(C13):DC(D7) DC(C14):DG(D6) DC(C15):DG(D5) DG(C16):DC(D4) DA(C17):DT(D3) DC(C18):DG(D2) DA(C19):DT(D1) DA(C20):DT(D0) chainA (100) SER136 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) HIS141 0 0 0 0 0 0 8 13 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG186 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) PRO189 3 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ARG191 0 17 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 91) SER136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 96) HIS141 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 11 1 0 0 0 0 (100) SER145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (141) ARG186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 (144) PRO189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 4 (146) ARG191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 17 9 0 prot.sequence idaelwyacagpqkalppvgsvvaylpqghieqvasfnnqeldaqiprynlpavipcmlndiqlsadpdsdevyatltlcpmseqpkrksrsftktltvSdtstHggfsvprraaddclpkldmslnppnqelvakdlhgnewrfrhifRgqPkRhllttgwsvfvsqkrlvagdavlflrgengqlrvgvrraprkvltsptmhigvlaaaahaateksrfsliynprscpsefvipyskylkavksnfnvgqrfkmkfesedpsdrrhtgtitgicdfdparwpgsewrslqvnwdesssserqervspwevepgn/idaelwyacagpqkalppvgsvvaylpqghieqvasfnnqiprynlpavipcmlndiqlsadpdsdevyatltlcpmseqsrsftktltvSdtstHggfSvprraaddclpkldmslnppnqelvakdlhgnewrfrhifRgqPkRhllttgwsvfvsqkrlvagdavlflrgengqlrvgvrraprqqqlqpkvltsptmhigvlaaaahaateksrfsliynprscpsefvipyskylkavksnfnvgqrfkmkfespsdrrhtgtitgicdfdparwpgsewrslqvnwdesssserqervspwevepgns >6sdg_B:DNA-binding_pseudobarrel_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF M. POLYMORPHA AUXIN RESPONSE FACTOR 2 (MPARF2) IN COMPLEX WITH HIGH AFFINITY DNA organism=Marchantia polymorpha DNA sequence DT(D0):DA(C20) DT(D1):DA(C19) DG(D2):DC(C18) DT(D3):DA(C17) DC(D4):DG(C16) DG(D5):DC(C15) DG(D6):DC(C14) DC(D7):DG(C13) DG(D8):DC(C12) DA(D9):DT(C11) DA(D10):DT(C10) DT(D11):DA(C9) DC(D12):DG(C8) DG(D13):DC(C7) DC(D14):DG(C6) DC(D15):DG(C5) DG(D16):DC(C4) DA(D17):DT(C3) DC(D18):DG(C2) DA(D19):DT(C1) DA(D20):DT(C0) chainB ( 91) SER136 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) HIS141 0 0 0 0 1 11 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) SER145 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) ARG186 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) PRO189 4 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) ARG191 0 9 17 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence idaelwyacagpqkalppvgsvvaylpqghieqvasfnnqiprynlpavipcmlndiqlsadpdsdevyatltlcpmseqsrsftktltvSdtstHggfSvprraaddclpkldmslnppnqelvakdlhgnewrfrhifRgqPkRhllttgwsvfvsqkrlvagdavlflrgengqlrvgvrraprqqqlqpkvltsptmhigvlaaaahaateksrfsliynprscpsefvipyskylkavksnfnvgqrfkmkfespsdrrhtgtitgicdfdparwpgsewrslqvnwdesssserqervspwevepgns >6se0_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CLASS 1 : CENP-A NUCLEOSOME organism=HOMO SAPIENS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainF ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rrrqgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleeglg/rdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkk/krsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/rrrQgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleeglg/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaRakaksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavll/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >6se6_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CLASS2 : CENP-A NUCLEOSOME IN COMPLEX WITH CENP-C CENTRAL REGION organism=HOMO SAPIENS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA chainB chainC chainD ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence rrrqgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl/vlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/srssraglqfpvgrvhrllrkgnyaervgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavll/Rkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/Rrrqgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl/Rkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaksrssraglqfpvgrvhrllrkgnyaervgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/eSysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >6see_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CLASS2A : CENP-A NUCLEOSOME IN COMPLEX WITH CENP-C CENTRAL REGION organism=HOMO SAPIENS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 1) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainF chainG chainH prot.sequence rrrqgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/srssraglqfpvgrvhrllrkgNyaervgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpn/Rkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/Rrrqgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl/Niqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaksrssraglqfpvgrvhrllrkgnyaervgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/Esysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >6sef_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CLASS2C : CENP-A NUCLEOSOME IN COMPLEX WITH CENP-C CENTRAL REGION organism=HOMO SAPIENS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DT(I72):DA(J-72) chainA chainB chainC chainD ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence rrrqgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl/rdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/srssraglqfpvgrvhrllrkgnyaervgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpni/Rkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/Rrrqgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl/Niqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaksrssraglqfpvgrvhrllrkgnyaervgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqa/Esysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >6seg_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CLASS1: CENP-A NUCLEOSOME IN COMPLEX WITH CENP-C CENTRAL REGION organism=HOMO SAPIENS DNA sequence DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA chainB ( 11) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainF chainG chainH prot.sequence qgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl/niqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/srssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpni/Rkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/Qgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl/Niqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaksrssraglqfpvgrvhrllrkgnyaervgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqav/Esysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >6seg_B:Histone-fold; title=CLASS1: CENP-A NUCLEOSOME IN COMPLEX WITH CENP-C CENTRAL REGION organism=HOMO SAPIENS DNA sequence DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainB ( 11) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >6sei_AC:RING/U-box;GIY-YIG_endonuclease; title=RECOGNITION AND PROCESSING OF BRANCHED DNA SUBSTRATES BY SLX1-SLX4 NUCLEASE organism=THIELAVIA TERRESTRIS DNA sequence DA(E3):DT(E33) DT(E4):DA(E32) DC(E5):DG(E31) DG(E6):DA(E30) DG(E7):DC(E29) DC(E8):DG(E28) DA(E9):DT(E25) DA(E10):DT(E24) DT(E11):DA(E23) DG(E12):DC(E22) DA(E13):DT(E21) DC(E14):DG(E20) DC(E15):DG(E19) chainA ( 19) ARG22 0 0 0 10 0 0 0 0 0 0 0 0 0 chainC ( 19) ARG22 0 0 0 0 0 0 0 1 4 3 0 0 0 prot.sequence qckpipalytvyvlrstvRhaslyigstpnpprrlkqhnglvpggaartsrsslrpwemvalvsgfpsmvaalkfqwaltnphlsvhipsasrrpqrpprslasvvanlhlllrvpsfarwplrvhffrrdvfaawekwcaaaserlrpslavvtdfeggspcwgihalpldyepikdyvakgqeifeferqgacvvcreemasgdglqalctnqgcdgvghlscwsrhflkeadsilpvqgqcpkcggemewgnmmkeltlrtrgqkevekllkr/qckpipalytvyvlrstvRhaslyigstpnpprrlkqhnglvpggaartsrsslrpwemvalvsgfpsmvaalkfqwaltnphlsvhipsasrpqrpprslasvvanlhlllrvpsfarwplrvhffrrdvfaawekwcaaaserlrpslavvtdfeggcwgihalpldyepikdyvakgqeifeferqgacvvcreemasgdglqalctnqgcdgvghlscwsrhflkdsilpvqgqcpkcggemewgnmmkeltlrtrgqkevekllk >6sei_C:RING/U-box;GIY-YIG_endonuclease; title=RECOGNITION AND PROCESSING OF BRANCHED DNA SUBSTRATES BY SLX1-SLX4 NUCLEASE organism=THIELAVIA TERRESTRIS DNA sequence DA(E3):DT(E33) DT(E4):DA(E32) DC(E5):DG(E31) DG(E6):DA(E30) DG(E7):DC(E29) DC(E8):DG(E28) DA(E9):DT(E25) DA(E10):DT(E24) DT(E11):DA(E23) DG(E12):DC(E22) DA(E13):DT(E21) DC(E14):DG(E20) DC(E15):DG(E19) chainC ( 19) ARG22 0 0 0 0 0 0 0 1 4 3 0 0 0 prot.sequence qckpipalytvyvlrstvRhaslyigstpnpprrlkqhnglvpggaartsrsslrpwemvalvsgfpsmvaalkfqwaltnphlsvhipsasrpqrpprslasvvanlhlllrvpsfarwplrvhffrrdvfaawekwcaaaserlrpslavvtdfeggcwgihalpldyepikdyvakgqeifeferqgacvvcreemasgdglqalctnqgcdgvghlscwsrhflkdsilpvqgqcpkcggemewgnmmkeltlrtrgqkevekllk >6sjb_BCD:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF THE RECBCD CHI RECOGNISED COMPLEX organism=ESCHERICHIA COLI DNA sequence DT(X89) DT(X88) DT(X87) DG(X86) DG(X85) DT(X84) DG(X83) DG(X82) DT(X81) DC(X80) DG(X79) DT(X78) DT(X77) DT(X76) DT(X75) DT(X74) DT(X73) DT(X72) DT(X71) DC(X70) DT(X69) DC(X68) DG(X67) DC(X66) DT(X65) DG(X64) DA(X63) DC(X62) DG(X61) DT(X60) DG(X59) DA(X58) DT(X57) DG(X56) DT(X55) DT(X54) DG(X53) DC(X33) DA(X32) DA(X31) DC(X30) DA(X29) DT(X28) DC(X27) DA(X26) DC(X25) DG(X24) DT(X23) DC(X22) DA(X21) DG(X20) DC(X19) DG(X18) DA(X17) DG(X16) DT(X15) DT(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X7) DT(X4) DT(X5) DT(X6):DT(X7) chainB ( 60) PHE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) HIS130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) GLN134 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) ASN138 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN150 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) LEU152 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) GLU154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ILE252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) PHE351 0 0 0 0 0 0 0 0 0 0 0 0 0 5 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) MET354 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) PHE422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (405) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (542) SER560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (566) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (724) HIS742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (743) ARG761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (806) ARG824 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 37) VAL37 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER39 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ALA43 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE62 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LEU64 0 0 0 15 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) PRO65 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ALA66 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) SER67 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) TRP70 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) SER84 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) LYS88 0 0 0 0 0 0 2 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) ASP133 0 0 0 0 0 0 0 8 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) ASP136 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) GLN137 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) VAL140 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) TYR141 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG186 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ARG443 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) TYR492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (556) LEU556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (649) ARG649 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (650) ILE650 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (651) SER651 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (652) GLN652 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (653) ARG653 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (663) THR663 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (665) MET665 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (666) PRO666 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (685) TYR685 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) ARG706 0 0 0 0 0 0 12 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (708) ARG708 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (712) ASP712 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (715) LEU715 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (875) LEU875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 (878) TYR878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (1073) GLN1073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1078) ASN1078 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (1079) MET1079 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1080) MET1080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 (1081) VAL1081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1082) ARG1082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) GLU12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 39) GLU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (232) HIS241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (237) ALA246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (238) GLN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 (239) PRO248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 (245) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (295) VAL304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 14 (296) GLU305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 12 (477) ARG486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (530) HIS539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (551) VAL560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtFteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftiHgfcQrmlNlnafesgmlfeQqLiEdesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgFddMlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyaFRgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvRSrqeaaqvrdaltlleipsvylsnRdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtiHkskgleyplvwlpfitnfRvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsySglqptltphqfprgaspgTflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag/mlrvyhsnrldvlealmefivererlddpfepemilVqSTgmAqwlqmtlsqkfgiaanidFpLPASfiWdmfvrvlpeipkeSafnKqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaaDlfDQylVYrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhRanlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrRarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrYlrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgLiaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqeRISQRflagpvnicTlMPmrsipfkvvcllgmndgvYprqlaplgfdlmsqkpkrgdRsRrddDryLflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfilegLsrYqinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflQayegNMMVRgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq/avEhkqlrpldvqfaltvagdehpavtlaaallshdagEghvclplsrlenneashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlHrllgAQPgsqrlRhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasVEagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiaRndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvHksqgsefdhaalilpsqrtpVvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss >6sjb_D:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF THE RECBCD CHI RECOGNISED COMPLEX organism=ESCHERICHIA COLI DNA sequence DT(X89) DT(X88) DT(X87) DG(X86) DG(X85) DT(X84) DG(X83) DG(X82) DT(X81) DC(X80) DG(X79) DT(X78) DT(X77) DT(X76) DT(X75) DT(X74) DT(X73) DT(X72) DT(X71) DC(X70) DT(X69) DC(X68) DG(X67) DC(X66) DT(X65) DG(X64) DA(X63) DC(X62) DG(X61) DT(X60) DG(X59) DA(X58) DT(X57) DG(X56) DT(X55) DT(X54) DG(X53) DC(X33) DA(X32) DA(X31) DC(X30) DA(X29) DT(X28) DC(X27) DA(X26) DC(X25) DG(X24) DT(X23) DC(X22) DA(X21) DG(X20) DC(X19) DG(X18) DA(X17) DG(X16) DT(X15) DT(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X7) DT(X4) DT(X5) DT(X6):DT(X7) chainD ( 3) GLU12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 39) GLU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (232) HIS241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (237) ALA246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (238) GLN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 (239) PRO248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 (245) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (295) VAL304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 14 (296) GLU305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 12 (477) ARG486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (530) HIS539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (551) VAL560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence avEhkqlrpldvqfaltvagdehpavtlaaallshdagEghvclplsrlenneashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlHrllgAQPgsqrlRhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasVEagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiaRndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvHksqgsefdhaalilpsqrtpVvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss >6sje_BCD:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF THE RECBCD CHI PARTIALLY-RECOGNISED COMPLEX organism=ESCHERICHIA COLI DNA sequence DT(X89) DT(X88) DT(X87) DG(X86) DG(X85) DT(X84) DG(X83) DG(X82) DT(X81) DC(X80) DG(X79) DT(X78) DT(X77) DT(X76) DT(X75) DT(X74) DT(X73) DT(X72) DT(X71) DC(X70) DT(X69) DC(X68) DG(X67) DC(X66) DT(X65) DG(X64) DA(X63) DC(X62) DG(X61) DT(X60) DG(X59) DA(X58) DT(X57) DG(X56) DT(X55) DT(X54) DG(X53) DC(X33) DA(X32) DA(X31) DC(X30) DA(X29) DT(X28) DC(X27) DA(X26) DC(X25) DG(X24) DT(X23) DC(X22) DA(X21) DG(X20) DC(X19) DG(X18) DA(X17) DG(X16) DT(X15) DT(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X7) DT(X4) DT(X5) DT(X6):DT(X7) chainB ( 60) PHE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) HIS130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) GLN134 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) ASN138 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN150 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) LEU152 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) GLU154 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ILE252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) PHE351 0 0 0 0 0 0 0 0 0 0 0 0 0 3 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) MET354 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) PHE422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (405) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (542) SER560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (566) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (724) HIS742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (743) ARG761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (806) ARG824 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 37) VAL37 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER39 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ALA43 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE62 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) PRO63 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LEU64 0 0 0 7 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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>6sje_C:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF THE RECBCD CHI PARTIALLY-RECOGNISED COMPLEX organism=ESCHERICHIA COLI DNA sequence DT(X89) DT(X88) DT(X87) DG(X86) DG(X85) DT(X84) DG(X83) DG(X82) DT(X81) DC(X80) DG(X79) DT(X78) DT(X77) DT(X76) DT(X75) DT(X74) DT(X73) DT(X72) DT(X71) DC(X70) DT(X69) DC(X68) DG(X67) DC(X66) DT(X65) DG(X64) DA(X63) DC(X62) DG(X61) DT(X60) DG(X59) DA(X58) DT(X57) DG(X56) DT(X55) DT(X54) DG(X53) DC(X33) DA(X32) DA(X31) DC(X30) DA(X29) DT(X28) DC(X27) DA(X26) DC(X25) DG(X24) DT(X23) DC(X22) DA(X21) DG(X20) DC(X19) DG(X18) DA(X17) DG(X16) DT(X15) DT(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X7) DT(X4) DT(X5) DT(X6):DT(X7) chainC ( 37) VAL37 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER39 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR40 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ALA43 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE62 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) PRO63 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LEU64 0 0 0 7 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) PRO65 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ALA66 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) SER67 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) TRP70 0 0 0 0 0 53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) SER84 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) LYS88 0 0 0 0 0 0 2 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) ASP133 0 0 0 0 0 0 0 11 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) ASP136 0 0 0 0 0 0 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) GLN137 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) VAL140 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) TYR141 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG186 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ARG443 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) TYR492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (650) ILE650 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (651) SER651 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (652) GLN652 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (653) ARG653 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (663) THR663 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (664) LEU664 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (665) MET665 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (666) PRO666 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (685) TYR685 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) ARG706 0 0 0 0 0 0 10 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (708) ARG708 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (712) ASP712 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (715) LEU715 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (875) LEU875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 (878) TYR878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (879) GLN879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (882) GLN882 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (1073) GLN1073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1078) ASN1078 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (1079) MET1079 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1080) MET1080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 (1081) VAL1081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1082) ARG1082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlrvyhsnrldvlealmefivererlddpfepemilVqSTgmAqwlqmtlsqkfgiaanidFPLPASfiWdmfvrvlpeipkeSafnKqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaaDlfDQylVYrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhRanlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrRarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrYlrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerISQRflagpvnicTLMPmrsipfkvvcllgmndgvYprqlaplgfdlmsqkpkrgdRsRrddDryLflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfilegLsrYQinQqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflQayegNMMVRgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq >6sjf_B:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF THE RECBCD CHI UNRECOGNISED COMPLEX organism=ESCHERICHIA COLI DNA sequence DG(X16):DC(X70) DA(X17):DT(X69) DG(X18):DC(X68) DC(X19):DG(X67) DG(X20):DC(X66) DA(X21):DT(X65) DC(X22):DG(X64) DT(X23):DA(X63) DG(X24):DC(X62) DC(X25):DG(X61) DA(X26):DT(X60) DC(X27):DG(X59) DT(X28):DA(X58) DA(X29):DT(X57) DC(X30):DG(X56) DA(X31):DT(X55) DA(X32):DT(X54) DC(X33):DG(X53) chainB (248) ILE252 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (806) ARG824 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag >6sjf_BCD:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF THE RECBCD CHI UNRECOGNISED COMPLEX organism=ESCHERICHIA COLI DNA sequence DG(X16):DC(X70) DA(X17):DT(X69) DG(X18):DC(X68) DC(X19):DG(X67) DG(X20):DC(X66) DA(X21):DT(X65) DC(X22):DG(X64) DT(X23):DA(X63) DG(X24):DC(X62) DC(X25):DG(X61) DA(X26):DT(X60) DC(X27):DG(X59) DT(X28):DA(X58) DA(X29):DT(X57) DC(X30):DG(X56) DA(X31):DT(X55) DA(X32):DT(X54) DC(X33):DG(X53) chainB (248) ILE252 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (806) ARG824 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (1073) GLN1073 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1078) ASN1078 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1079) MET1079 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1080) MET1080 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1081) VAL1081 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag/mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfileglsryqinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflQayegNMMVrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq/avehkqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlenneashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlhrllgaqpgsqrlrhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasveagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiarndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvhksqgsefdhaalilpsqrtpvvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss >6sjf_C:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF THE RECBCD CHI UNRECOGNISED COMPLEX organism=ESCHERICHIA COLI DNA sequence DG(X16):DC(X70) DA(X17):DT(X69) DG(X18):DC(X68) DC(X19):DG(X67) DG(X20):DC(X66) DA(X21):DT(X65) DC(X22):DG(X64) DT(X23):DA(X63) DG(X24):DC(X62) DC(X25):DG(X61) DA(X26):DT(X60) DC(X27):DG(X59) DT(X28):DA(X58) DA(X29):DT(X57) DC(X30):DG(X56) DA(X31):DT(X55) DA(X32):DT(X54) DC(X33):DG(X53) chainC (1073) GLN1073 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1078) ASN1078 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1079) MET1079 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1080) MET1080 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1081) VAL1081 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfileglsryqinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflQayegNMMVrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq >6sjg_BCD:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF THE RECBCD NO CHI NEGATIVE CONTROL COMPLEX organism=ESCHERICHIA COLI DNA sequence DT(X75) DT(X74) DT(X73) DT(X72) DT(X71) DC(X70) DT(X69) DC(X68) DG(X67) DC(X66) DT(X65) DG(X64) DA(X63) DC(X62) DG(X61) DT(X60) DG(X59) DA(X58) DT(X57) DG(X56) DT(X55) DT(X54) DG(X53) DC(X33) DA(X32) DA(X31) DC(X30) DA(X29) DT(X28) DC(X27) DA(X26) DC(X25) DG(X24) DT(X23) DC(X22) DA(X21) DG(X20) DC(X19) DG(X18) DA(X17) DG(X16) DT(X15) DT(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X7) DT(X4) DT(X5) DT(X6):DT(X7) chainB ( 60) PHE64 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) HIS130 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ILE252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) PHE351 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) PHE422 0 0 10 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (405) ARG423 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG559 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (542) SER560 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (566) ARG584 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (724) HIS742 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (743) ARG761 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (806) ARG824 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (492) TYR492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (858) ARG858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (875) LEU875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 (878) TYR878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (879) GLN879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (1073) GLN1073 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1078) ASN1078 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (1079) MET1079 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1080) MET1080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 (1081) VAL1081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (1082) ARG1082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 chainD ( 3) GLU12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 39) GLU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (232) HIS241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (237) ALA246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (238) GLN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 (239) PRO248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 2 0 0 0 0 0 (245) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (295) VAL304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 13 (296) GLU305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 13 (477) ARG486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (530) HIS539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (550) PRO559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (551) VAL560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtFteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftiHgfcqrmlnlnafesgmlfeqqLiedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgFddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyaFRgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvRSrqeaaqvrdaltlleipsvylsnRdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtiHkskgleyplvwlpfitnfRvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag/mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrYlrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfRtedseipdtepfilegLsrYQinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflQayegNMMVRgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq/avEhkqlrpldvqfaltvagdehpavtlaaallshdagEghvclplsrlenneashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlHrllgAQPgsqrlRhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasVEagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiaRndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvHksqgsefdhaalilpsqrtPVvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss >6sjg_C:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF THE RECBCD NO CHI NEGATIVE CONTROL COMPLEX organism=ESCHERICHIA COLI DNA sequence DT(X75) DT(X74) DT(X73) DT(X72) DT(X71) DC(X70) DT(X69) DC(X68) DG(X67) DC(X66) DT(X65) DG(X64) DA(X63) DC(X62) DG(X61) DT(X60) DG(X59) DA(X58) DT(X57) DG(X56) DT(X55) DT(X54) DG(X53) DC(X33) DA(X32) DA(X31) DC(X30) DA(X29) DT(X28) DC(X27) DA(X26) DC(X25) DG(X24) DT(X23) DC(X22) DA(X21) DG(X20) DC(X19) DG(X18) DA(X17) DG(X16) DT(X15) DT(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X7) DT(X4) DT(X5) DT(X6):DT(X7) chainC (492) TYR492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (858) ARG858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (875) LEU875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 (878) TYR878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (879) GLN879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (1073) GLN1073 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1078) ASN1078 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (1079) MET1079 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1080) MET1080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 (1081) VAL1081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (1082) ARG1082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 prot.sequence mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrYlrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfRtedseipdtepfilegLsrYQinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflQayegNMMVRgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq >6skl_34567XY: title=CRYO-EM STRUCTURE OF THE CMG FORK PROTECTION COMPLEX AT A REPLICATION FORK - CONFORMATION 1 organism=? DNA sequence DT(I26):DA(J36) DT(I27):DA(J35) DA(I28):DT(J34) DG(I29):DC(J33) DA(I30):DT(J32) DG(I31):DC(J31) DA(I32):DT(J30) DA(I33):DT(J29) DT(I34):DA(J28) DT(I35):DA(J27) DG(I36):DC(J26) DG(I37):DC(J25) DA(I38):DT(J24) DG(I39):DC(J23) DA(I40):DT(J22) DG(I41):DC(J21) DT(I42):DA(J20) DG(I43):DC(J19) DT(I44):DA(J18) DG(I45):DC(J17) DT(I46):DA(J16) DT(I47):DC(J15) chain3 chain4 (276) ARG449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (277) GLN450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 chain5 chain6 chain7 (295) PHE363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 9 (298) LEU366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 (299) LYS367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 chainX (346) ARG401 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainY ( 3) ARG48 0 0 0 0 0 0 0 0 0 3 11 5 0 0 0 0 0 0 0 0 0 0 prot.sequence davfgdrvrrfqefldtftsyrdsvrsiqvynsnnaanynilphriiislddlrefdrsfwsgilvepayfippaekaltdladsmddvphpnasavssrhpwklsfkgsfgahalsprtltaqhlnklvsvegivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnkltteygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfkslgaggmnqsnsntligfktlilgntvyplharaarqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattgrgssgvgltaavttdretgerrleagamvladrgvvcidefdkmtdvdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrthrylppgylegepvrpklvtipflrkyvqyakervipqltqeainvivknytdlrndpitartletlirlatahakvrlsktvnkvdakvaanllrfallge/seplriiwgtnvsiqecttnfrnflmsfkykfrkildereefinnttdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransRQrvlkslyktyvdvvhvkkvdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktfryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitrvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledvlpvefltmyisyakehihpiiteaaktelvrayvgmrkmtattrqlesmirlaeahakmklknvveledvqeavrlirsaikdkidmnlvqtgksviqrklqedlsreimnvlkdqasdsmsfnelikqinehsqdrvessdiqealsrlqqedkvivlggvrrsv/ndddnteiiksfknfilefrldsqfiyrdqlrnnilvknysltvnmehligynediykklsdepsdiiplfetaitqvakrisilsraslptfqlilnsnanqiplrdldsehvskivrlsgiiistsvlssratylsimcrncrhttsitinnfnvslprsclsncgpdpyiiihesskfidqqflklqeipelvpvgemprnltmtcdryltnkvipgtrvtivgiysiynskngvairtpyikilgiqsdvetssiwnsvtmfteeeeeeflQLsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllgdpgtaksqllkfvekvspiavytsgkgssaagltasvqrdpmtrefyleggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanpiygryddlkspgdnidfqttilsrfdmifivkddhneerdisianhvinihtgnanamqnqqeengseisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinelesterssipitirqleaiiriteslaklelspiaqerhvdeairlfqastmdaasq/sfksralnhvkkvddvtgekvreafeqfledfsvqstdtgevekvyraqiefmkiydlntiyidyqhlsmrengalamaiseqyyrflpflqkglrrvvrkyapellntsspeqtervfqisffnlptvhrirdirsekigsllsisgtvtrtsevrpelykasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsrfldwqkvriqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpdvtqlglpgvkpssNSgvtglrslgvrdltykisflachvisignerdqevflnslssdeinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsgkassaagltaavvrddytieagalmladngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkppfsaeqlrryikyartfkpiltkearsylvekykelrkddaqgfsrssyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsiirv/alpsiqlpvdynnlfneitdflvtfkqdtlsgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcraidnnmplptkeidykddvldvilnqrrlrnermlsdrelfppnltrryflyfkplsqnaisskplsvrqikgdflgqlitvrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflpapytgFkaLKaglltetyleaqfvrqhkdveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrkirgdinvclmgdpgvaksqllkaickisprgvyttgkltaavmkdpvtdemileggalvladngiccidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskrfsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyq/adfsltvlrariallataiggpdytppyklgddclaclkdlkrwfklvddqqkrwdvamavaeyriltddllpilidwenkcslaaklankayydkialnclqllvlmtwplivteqsssnqitlygelkkhqlvykktilsmesgkvlraairlaldvikidrlsrtprdnmvlklvlnffrnviaiepgeftintkksmpkkgitsidtlppnvsmddislntvissfhknkvfgflltltsslsdfiniplleimfyftkdvnqellfprtsagfelskllqkehqmrknvikhtsarhsrfggllsiqtpdktrltvsgsqalvdekialqklddskkwnkRiikkeglpnsllnsqtgkaifftesngkhfkefinnfidsgfnillhsvtnyftteqdrmvtleqveyllffawfvkyqllrskidnsadikqvsealkevtfilvssllrsaydlknwtvthagmiafnellnlvsrtkaaqdiefivsrlfsderiqllsnlpkigskyslqfmkscielthsvlkvleqysvnfqkvqanymtepvietyinflerfreleddsikkvfsffhrvfvqakeqallfrfdliillremlspdgldrmsrsrkyvsqfsdyflarlkkrlkkspawfvgllfpplhnsevgfyqryge/rkRrpqvkltaekllsdkglpyvlknahkririsskknsydnlsniiqfyqlwahelfpkakfkdfmkicqtvgktdpvlreyrvslfrdemgm >6skl_4:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF THE CMG FORK PROTECTION COMPLEX AT A REPLICATION FORK - CONFORMATION 1 organism=? DNA sequence DT(I26):DA(J36) DT(I27):DA(J35) DA(I28):DT(J34) DG(I29):DC(J33) DA(I30):DT(J32) DG(I31):DC(J31) DA(I32):DT(J30) DA(I33):DT(J29) DT(I34):DA(J28) DT(I35):DA(J27) DG(I36):DC(J26) DG(I37):DC(J25) DA(I38):DT(J24) DG(I39):DC(J23) DA(I40):DT(J22) DG(I41):DC(J21) DT(I42):DA(J20) DG(I43):DC(J19) DT(I44):DA(J18) DG(I45):DC(J17) DT(I46):DA(J16) DT(I47):DC(J15) chain4 (276) ARG449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (277) GLN450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence seplriiwgtnvsiqecttnfrnflmsfkykfrkildereefinnttdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransRQrvlkslyktyvdvvhvkkvdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktfryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitrvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledvlpvefltmyisyakehihpiiteaaktelvrayvgmrkmtattrqlesmirlaeahakmklknvveledvqeavrlirsaikdkidmnlvqtgksviqrklqedlsreimnvlkdqasdsmsfnelikqinehsqdrvessdiqealsrlqqedkvivlggvrrsv >6sko_234567:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF THE FORK PROTECTION COMPLEX BOUND TO CMG AT A REPLICATION FORK - CONFORMATION 2 MCM CTD:SSDNA organism=? DNA sequence DT(I1) DT(I2) DT(I3) DT(I4) DT(I5) DT(I6) DT(I7) DT(I8) DT(I9) DT(I10) DT(I11) DT(I12) DT(I13) DT(I14) DT(I15) DT(I16) chain6 (113) VAL612 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (119) TYR621 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 chain7 (106) LYS499 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 chain2 (108) TRP589 0 21 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chain5 (101) ARG455 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (102) PHE462 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 chain3 chain4 prot.sequence fswteeeerefrkisrdrgiidkiissmapsiyghrdiktavacslfggvpknvsirgdinvlllgdpgtaksqilkyvektahravfatgqgasavgltasvrkdeWtleggalvladkgvclidefdqdrtsiheameqqsisiskagivttlqarcsiiaaanpnggrynstlplaqnvsltepilsrfdilcvvrdlvdeeaderlatfvvdshvrshpenlqrqrkkeeeispipqellmkyihyartkiypklhqmdmdkvsrvyadlrresistpitvrhlesilriaesfakmrlsefvssydldraikvvvdsfvdaqkvsvrrqlrrsfaiytlgh/arqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattgrgssgvgltaAvttderrleagamvladrgvvcidefdkmtdvdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrthrylppgylegepvrpklvtipflrkyvqyakervipqltqeainvivknytdlrnddntkkspitartletlirlatahakvrlsktvnkvdakvaanllrfallged/qitdqdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktftkggryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitRlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledkpdvlpvefltmyisyakehihpiiteaaktelvrayvgmrkmtattrqlesmirlaeahakmklknvveledvqeavrlirsaikdyatdpktgkidmnlvqt/mfteeeeeeflqlsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllaksqllkfvekvspiavytsgkgaagltasvqRFyleggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanttilsrfdmifivneerdisianhvinihtseisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinpitirqleaiiriteslaklelspiaqerhvdeairlfqas/dqevflnslssdeinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsgkassaagltaaVvrdedYtieagalmladngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkrdeaieppfsaeqlrryikyartfkpiltkearsylvekykelrkddasyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsii/tsdveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrvgdgmkirgdinvclmgdpgvaksqllkaickisprgvyttgkgssgvgltaavmKdpvtdemileggalvladngiccidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskremdskfsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyqe >6sko_5:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF THE FORK PROTECTION COMPLEX BOUND TO CMG AT A REPLICATION FORK - CONFORMATION 2 MCM CTD:SSDNA organism=? DNA sequence DT(I1) DT(I2) DT(I3) DT(I4) DT(I5) DT(I6) DT(I7) DT(I8) DT(I9) DT(I10) DT(I11) DT(I12) DT(I13) DT(I14) DT(I15) DT(I16) chain5 (101) ARG455 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (102) PHE462 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence mfteeeeeeflqlsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllaksqllkfvekvspiavytsgkgaagltasvqRFyleggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanttilsrfdmifivneerdisianhvinihtseisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinpitirqleaiiriteslaklelspiaqerhvdeairlfqas >6sxb_G:Restriction_endonuclease-like;RuvA_domain_2-like; title=XPF-ERCC1 CRYO-EM STRUCTURE, DNA-BOUND FORM organism=HOMO SAPIENS DNA sequence DT(D1):DA(C15) DC(D2):DG(C14) DA(D3):DT(C13) DG(D4):DC(C12) DC(D5):DG(C11) DA(D6):DT(C10) DT(D7):DA(C9) DC(D8):DG(C8) DT(D9):DA(C7) DG(D10):DC(C6) chainG (137) LYS243 0 1 6 0 0 0 0 0 0 0 prot.sequence siivsprqrgnpvlkfvrnvpwefgdvipdyvlgqstcalflslryhnlhpdyihgrlqslgknfalrvllvqvdvkdpqqalkelakmciladctlilawspeeagryletykayeqkpadldfvsrvteclttvKsvnktdsqtllttfgsleqliaasredlalcpglgpqkarrlfdvlhepflkvp >6sy0_B: title=STRUCTURE OF THE PLASMODIUM FALCIPARUM SIP2 DNA-BINDING AP2 TANDEM REPEAT IN COMPLEX WITH TWO SPE2 HALF-SITES organism=? DNA sequence DG(E1):DC(H18) DG(E2):DC(H17) DT(E3):DA(H16) DG(E4):DC(H15) DC(E5):DG(H14) DA(E6):DT(H13) DC(E7):DG(H12) DC(E8):DG(H11) DT(E9):DA(H10) DA(E10):DT(H9) DG(E11):DC(H8) DG(E12):DC(H7) DT(E13):DA(H6) DG(E14):DC(H5) DC(E15):DG(H4) DA(E16):DT(H3) DC(E17):DG(H2) DC(E18):DG(H1) chainB ( 12) ARG19 0 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) SER37 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LYS39 0 0 0 8 10 17 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) LYS40 0 0 0 0 0 9 12 12 3 0 0 0 0 0 0 0 0 0 ( 88) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (107) LYS115 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 2 0 0 prot.sequence qepvilidkieRclvvewyennirreqriSyKKygndkaklrakelieklksgitfeqlypdkgppivrvfenvgvynvslirdrieRewrvewlengvpmkarwsKkvgndeaqkradtfaqsmikgifn >6t1f_AB:KorB_DNA-binding_domain-like;ParB/Sulfiredoxin; title=CRYSTAL STRUCTURE OF THE C-TERMINALLY TRUNCATED CHROMOSOME- PARTITIONING PROTEIN PARB FROM CAULOBACTER CRESCENTUS COMPLEXED TO THE CENTROMERIC PARS SITE organism=Caulobacter vibrioides (strain NA1000 / CB15N) / Caulobacter vibrioides (strain NA1000 / CB15N) / Caulobacter vibrioides (strain NA1000 / CB15N) / Caulobacter vibrioides (strain NA1000 / CB15N) DNA sequence DG(F1):DC(E22) DG(F2):DC(E21) DA(F3):DT(E20) DT(F4):DA(E19) DG(F5):DC(E18) DT(F6):DA(E17) DT(F7):DA(E16) DT(F8):DA(E15) DC(F9):DG(E14) DA(F10):DT(E13) DC(F11):DG(E12) DG(F12):DC(E11) DT(F13):DA(E10) DG(F14):DC(E9) DA(F15):DT(E8) DA(F16):DT(E7) DA(F17):DT(E6) DC(F18):DG(E5) DA(F19):DT(E4) DT(F20):DA(E3) DC(F21):DG(E2) DC(F22):DG(E1) chainA (115) GLN162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (125) SER172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (126) ARG173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 19 0 0 0 (127) SER174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 4 0 0 0 0 0 (130) ALA177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (131) ASN178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 (134) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 (157) ARG204 0 0 0 0 0 0 0 0 0 0 0 0 2 14 10 2 0 0 0 0 0 0 (179) VAL226 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 (180) ARG227 0 0 0 0 0 0 0 0 0 0 0 7 11 10 0 0 0 0 0 0 0 0 (183) GLU230 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 chainB (113) GLN162 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) SER172 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) ARG173 0 0 0 20 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) SER174 0 0 0 0 0 4 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ALA177 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) ASN178 0 0 0 0 0 9 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) ARG181 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ARG204 0 0 0 0 0 0 1 10 14 2 0 0 0 0 0 0 0 0 0 0 0 0 (177) VAL226 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 (178) ARG227 0 0 0 0 0 0 0 0 11 15 9 0 0 0 0 0 0 0 0 0 0 0 (181) GLU230 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sreapieilqrnpdtfreedledlsnsirekgvlqpilvrpspdtageyqivagerrwraaqraglktvpimvrelddlavleigiienvqradlnvleealsykvlmekfertQeniaqtigkSRShvANtmRllalpdevqsylvsgeltaghaRaiaaaadpvalakqiiegglsVRetEalarkapn/sreapieilqrnpdqprrtfreedledlsnslqpilvrpspdtageyqivagerrwraaqraglktvpimvrelddlavleigiienvqradlnvleealsykvlmekfertQeniaqtigkSRShvANtmRllalpdevqsylvsgeltaghaRaiaaaadpvalakqiiegglsVRetEalarkapnl >6t1f_B:KorB_DNA-binding_domain-like;ParB/Sulfiredoxin; title=CRYSTAL STRUCTURE OF THE C-TERMINALLY TRUNCATED CHROMOSOME- PARTITIONING PROTEIN PARB FROM CAULOBACTER CRESCENTUS COMPLEXED TO THE CENTROMERIC PARS SITE organism=Caulobacter vibrioides (strain NA1000 / CB15N) / Caulobacter vibrioides (strain NA1000 / CB15N) DNA sequence DG(F1):DC(E22) DG(F2):DC(E21) DA(F3):DT(E20) DT(F4):DA(E19) DG(F5):DC(E18) DT(F6):DA(E17) DT(F7):DA(E16) DT(F8):DA(E15) DC(F9):DG(E14) DA(F10):DT(E13) DC(F11):DG(E12) DG(F12):DC(E11) DT(F13):DA(E10) DG(F14):DC(E9) DA(F15):DT(E8) DA(F16):DT(E7) DA(F17):DT(E6) DC(F18):DG(E5) DA(F19):DT(E4) DT(F20):DA(E3) DC(F21):DG(E2) DC(F22):DG(E1) chainB (113) GLN162 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) SER172 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) ARG173 0 0 0 20 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) SER174 0 0 0 0 0 4 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ALA177 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) ASN178 0 0 0 0 0 9 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) ARG181 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ARG204 0 0 0 0 0 0 1 10 14 2 0 0 0 0 0 0 0 0 0 0 0 0 (177) VAL226 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 (178) ARG227 0 0 0 0 0 0 0 0 11 15 9 0 0 0 0 0 0 0 0 0 0 0 (181) GLU230 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sreapieilqrnpdqprrtfreedledlsnslqpilvrpspdtageyqivagerrwraaqraglktvpimvrelddlavleigiienvqradlnvleealsykvlmekfertQeniaqtigkSRShvANtmRllalpdevqsylvsgeltaghaRaiaaaadpvalakqiiegglsVRetEalarkapnl >6t1f_CD:KorB_DNA-binding_domain-like;ParB/Sulfiredoxin; title=CRYSTAL STRUCTURE OF THE C-TERMINALLY TRUNCATED CHROMOSOME- PARTITIONING PROTEIN PARB FROM CAULOBACTER CRESCENTUS COMPLEXED TO THE CENTROMERIC PARS SITE organism=Caulobacter vibrioides (strain NA1000 / CB15N) / Caulobacter vibrioides (strain NA1000 / CB15N) / Caulobacter vibrioides (strain NA1000 / CB15N) / Caulobacter vibrioides (strain NA1000 / CB15N) DNA sequence DG(H1):DC(G22) DG(H2):DC(G21) DA(H3):DT(G20) DT(H4):DA(G19) DG(H5):DC(G18) DT(H6):DA(G17) DT(H7):DA(G16) DT(H8):DA(G15) DC(H9):DG(G14) DA(H10):DT(G13) DC(H11):DG(G12) DG(H12):DC(G11) DT(H13):DA(G10) DG(H14):DC(G9) DA(H15):DT(G8) DA(H16):DT(G7) DA(H17):DT(G6) DC(H18):DG(G5) DA(H19):DT(G4) DT(H20):DA(G3) DC(H21):DG(G2) DC(H22):DG(G1) chainC (119) GLN162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (129) SER172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (130) ARG173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 15 19 0 0 0 (131) SER174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 4 0 0 0 0 0 (134) ALA177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (135) ASN178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 (138) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (161) ARG204 0 0 0 0 0 0 0 0 0 0 0 0 2 14 8 2 0 0 0 0 0 0 (183) VAL226 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 (184) ARG227 0 0 0 0 0 0 0 0 0 0 0 7 10 12 0 0 0 0 0 0 0 0 (187) GLU230 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 chainD (113) GLN162 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) SER172 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) ARG173 0 0 0 19 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) SER174 0 0 0 0 0 5 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ALA177 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) ASN178 0 0 0 0 0 9 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) ARG181 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ARG204 0 0 0 0 0 0 2 7 16 2 0 0 0 0 0 0 0 0 0 0 0 0 (177) VAL226 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 (178) ARG227 0 0 0 0 0 0 0 0 11 10 6 0 0 0 0 0 0 0 0 0 0 0 (181) GLU230 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sreapieilqrnpdqprrtfreedledlsnsirekgvlqpilvrpspdtageyqivagerrwraaqraglktvpimvrelddlavleigiienvqradlnvleealsykvlmekfertQeniaqtigkSRShvANtmRllalpdevqsylvsgeltaghaRaiaaaadpvalakqiiegglsVRetEalarkapn/sreapieilqrnpdqprrtfreedledlsnslqpilvrpspdtageyqivagerrwraaqraglktvpimvrelddlavleigiienvqradlnvleealsykvlmekfertQeniaqtigkSRShvANtmRllalpdevqsylvsgeltaghaRaiaaaadpvalakqiiegglsVRetEalarka >6t21_B: title=N-TERMINAL DOMAIN OF ECOKMCRA RESTRICTION ENDONUCLEASE (NECO) IN COMPLEX WITH T5MCGA TARGET SEQUENCE organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(E1):DA(F10) DC(E2):DG(F9) DA(E3):DT(F8) DT(E4):DA(F7) 5CM(E5):DG(F6) DG(E6):5CM(F5) DA(E7):DT(F4) DT(E8):DA(F3) DT(E9):DA(F2) DC(E10):DG(F1) chainB ( 32) SER30 0 0 0 1 2 0 0 0 0 0 ( 33) TRP31 0 0 0 0 0 5 9 0 0 0 ( 35) PRO33 0 0 8 8 5 0 0 0 0 0 ( 38) ARG36 0 0 0 1 0 0 0 0 0 0 (111) ARG109 0 0 0 3 0 0 0 0 0 0 (121) ASN119 0 0 0 0 23 8 4 0 0 0 (122) ARG120 0 0 0 0 0 0 0 0 4 0 (123) THR121 0 0 0 0 0 0 2 0 0 0 (124) LYS122 0 0 0 0 1 0 0 0 0 0 prot.sequence efmhvfdnngielkaecsigeedgvyglileSWgPgdRnkdynialdyiierlvdsgvsqvvvylasssvrkhmhslderkihpgeyftlignsprdirlkmcgyqayfsRtgrkeipsgNRTkrilinvpgiysdsfwasiirg >6t22_A: title=N-TERMINAL DOMAIN OF ECOKMCRA RESTRICTION ENDONUCLEASE (NECO) IN COMPLEX WITH T5HMCGA TARGET SEQUENCE organism=ESCHERICHIA COLI K-12 DNA sequence DG(D1):DC(C10) DA(D2):DT(C9) DA(D3):DT(C8) DT(D4):DA(C7) DG(D6):DG(C6) DA(D7):DT(C4) DT(D8):DA(C3) DG(D9):DC(C2) DA(D10):DT(C1) chainA ( 32) SER30 0 0 0 0 0 1 0 0 0 ( 33) TRP31 0 0 0 8 0 0 0 0 0 ( 35) PRO33 0 0 0 0 5 6 6 0 0 ( 38) ARG36 0 0 0 0 0 1 0 0 0 (111) ARG109 0 0 0 0 0 3 0 0 0 (121) ASN119 0 0 0 3 7 0 0 0 0 (122) ARG120 0 2 0 0 0 0 0 0 0 (123) THR121 0 0 0 2 0 0 0 0 0 prot.sequence efmhvfdnngielkaecsigeedgvyglileSWgPgdRnkdynialdyiierlvdsgvsqvvvylasssvrkhmhslderkihpgeyftlignsprdirlkmcgyqayfsRtgrkeipsgNRTkrilinvpgiysdsfwasiirg >6t2u_B:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF THE RECBCD IN COMPLEX WITH CHI-MINUS2 SUBSTRATE organism=? DNA sequence DT(X75) DT(X74) DT(X73) DT(X72) DT(X71) DC(X70) DT(X69) DC(X68) DG(X67) DC(X66) DT(X65) DG(X64) DA(X63) DC(X62) DG(X61) DT(X60) DG(X59) DA(X58) DT(X57) DG(X56) DT(X55) DT(X54) DG(X53) DC(X33) DA(X32) DA(X31) DC(X30) DA(X29) DT(X28) DC(X27) DA(X26) DC(X25) DG(X24) DT(X23) DC(X22) DA(X21) DG(X20) DC(X19) DG(X18) DA(X17) DG(X16) DT(X15) DT(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X4) DT(X5) DT(X6) DT(X7):DT(X8) chainB (248) ILE252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) PHE351 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) PHE422 0 0 4 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (405) ARG423 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG559 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (542) SER560 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (566) ARG584 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (724) HIS742 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (743) ARG761 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (806) ARG824 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqLiedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgFddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyaFRgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvRSrqeaaqvrdaltlleipsvylsnRdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtiHkskgleyplvwlpfitnfRvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag >6t2u_BCD:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF THE RECBCD IN COMPLEX WITH CHI-MINUS2 SUBSTRATE organism=ESCHERICHIA COLI DNA sequence DT(X75) DT(X74) DT(X73) DT(X72) DT(X71) DC(X70) DT(X69) DC(X68) DG(X67) DC(X66) DT(X65) DG(X64) DA(X63) DC(X62) DG(X61) DT(X60) DG(X59) DA(X58) DT(X57) DG(X56) DT(X55) DT(X54) DG(X53) DC(X33) DA(X32) DA(X31) DC(X30) DA(X29) DT(X28) DC(X27) DA(X26) DC(X25) DG(X24) DT(X23) DC(X22) DA(X21) DG(X20) DC(X19) DG(X18) DA(X17) DG(X16) DT(X15) DT(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X4) DT(X5) DT(X6) DT(X7):DT(X8) chainB (248) ILE252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) PHE351 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) PHE422 0 0 4 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (405) ARG423 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG559 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (542) SER560 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (566) ARG584 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (724) HIS742 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (743) ARG761 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (806) ARG824 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (858) ARG858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (875) LEU875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 (878) TYR878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (879) GLN879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (1078) ASN1078 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (1079) MET1079 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1080) MET1080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 (1081) VAL1081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (1082) ARG1082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) GLU12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 39) GLU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (232) HIS241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 5 (238) GLN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 (239) PRO248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 3 0 0 0 0 0 (245) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (295) VAL304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 (296) GLU305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (436) ARG445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (477) ARG486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 (530) HIS539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (550) PRO559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (551) VAL560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqLiedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgFddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyaFRgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvRSrqeaaqvrdaltlleipsvylsnRdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtiHkskgleyplvwlpfitnfRvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag/mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfRtedseipdtepfilegLsrYQinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegNMMVRgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq/avEhkqlrpldvqfaltvagdehpavtlaaallshdagEghvclplsrlenneashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlHrllgaQPgsqrlRhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasVEagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalRegpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiaRndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvHksqgsefdhaalilpsqrtPVvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss >6t2v_BCD:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF THE RECBCD IN COMPLEX WITH CHI-PLUS2 SUBSTRATE organism=ESCHERICHIA COLI DNA sequence DT(X75) DT(X74) DT(X73) DT(X72) DT(X71) DC(X70) DT(X69) DC(X68) DG(X67) DC(X66) DT(X65) DG(X64) DA(X63) DC(X62) DG(X61) DT(X60) DG(X59) DA(X58) DT(X57) DG(X56) DT(X55) DT(X54) DG(X53) DC(X33) DA(X32) DA(X31) DC(X30) DA(X29) DT(X28) DC(X27) DA(X26) DC(X25) DG(X24) DT(X23) DC(X22) DA(X21) DG(X20) DC(X19) DG(X18) DA(X17) DG(X16) DT(X15) DT(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X4) DT(X5) DT(X6) DT(X7):DT(X8) chainB (248) ILE252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) PHE351 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) PHE422 0 0 9 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (405) ARG423 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG559 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (542) SER560 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (566) ARG584 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (724) HIS742 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (743) ARG761 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (858) ARG858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (875) LEU875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 (878) TYR878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (879) GLN879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (1078) ASN1078 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (1079) MET1079 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1080) MET1080 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 (1081) VAL1081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (1082) ARG1082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) GLU12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 39) GLU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (232) HIS241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 (238) GLN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 (239) PRO248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 3 0 0 0 0 0 (245) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (295) VAL304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 (296) GLU305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (477) ARG486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 (530) HIS539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 (551) VAL560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqLiedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgFddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyaFRgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvRSrqeaaqvrdaltlleipsvylsnRdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtiHkskgleyplvwlpfitnfRvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag/mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfRtedseipdtepfilegLsrYQinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegNMMVRgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq/avEhkqlrpldvqfaltvagdehpavtlaaallshdagEghvclplsrlenneashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlHrllgaQPgsqrlRhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasVEagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiaRndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvHksqgsefdhaalilpsqrtpVvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss >6t2v_C:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF THE RECBCD IN COMPLEX WITH CHI-PLUS2 SUBSTRATE organism=ESCHERICHIA COLI DNA sequence DT(X75) DT(X74) DT(X73) DT(X72) DT(X71) DC(X70) DT(X69) DC(X68) DG(X67) DC(X66) DT(X65) DG(X64) DA(X63) DC(X62) DG(X61) DT(X60) DG(X59) DA(X58) DT(X57) DG(X56) DT(X55) DT(X54) DG(X53) DC(X33) DA(X32) DA(X31) DC(X30) DA(X29) DT(X28) DC(X27) DA(X26) DC(X25) DG(X24) DT(X23) DC(X22) DA(X21) DG(X20) DC(X19) DG(X18) DA(X17) DG(X16) DT(X15) DT(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X4) DT(X5) DT(X6) DT(X7):DT(X8) chainC (858) ARG858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (875) LEU875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 (878) TYR878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (879) GLN879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (1078) ASN1078 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (1079) MET1079 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1080) MET1080 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 (1081) VAL1081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (1082) ARG1082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfRtedseipdtepfilegLsrYQinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegNMMVRgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq >6t5t_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF ARCHAEOGLOBUS FULGIDUS ARGONAUTE PROTEIN WITH COGNATE DNA OLIGODUPLEX 5'-PATTGTGGCCACAAT organism=? DNA sequence DT(R2):DA(S13) DT(R3):DA(S12) DG(R4):DC(S11) DT(R5):DA(S10) DG(R6):DC(S9) DG(R7):DC(S8) DC(R8):DG(S7) DC(R9):DG(S6) DA(R10):DT(S5) DC(R11):DG(S4) DA(R12):DT(S3) DA(R13):DT(S2) DT(R14):DA(S1) chainA (134) ILE143 1 0 0 0 0 0 0 0 0 0 0 0 0 (138) ARG147 14 14 5 0 0 0 0 0 0 0 0 0 0 (142) PHE151 22 0 0 0 0 0 0 0 0 0 0 0 0 (143) TYR152 10 0 0 0 0 0 0 0 0 0 0 0 0 (146) ASN155 7 0 0 0 0 0 0 0 0 0 0 0 0 (360) ARG383 8 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gltyrigngasvpisntgelikglrnygpyevpslkynqialihnnqfsslinqlksqisskidevwhihninisefiydsphfdsiksqvdnaidtgvdgimlvlpeyntplyyklksylinsipsqfmrydIlsnRnltFYvdNllvqfvsklggkpwilnvdpekgsdiiigtgatridnvnlfcfamvfkkdgtmlwneispivtsseyltylkstikkvvygfkksnpdwdvekltlhvsgkrpkmkdgetkilketveelkkqemvsrdvkyailhlnethpfwvmgpyegtkvklsskrylltllqpemvtpikplsveivsdnwtseeyyhnvheildeiyylskmnwrgfRsrnlpvtvnypklvagiianvnryggypinpegnrslqtnpwfl >6t78_A:HMG-box; title=STRUCTURE OF HUMAN SOX11 TRANSCRIPTION FACTOR IN COMPLEX WITH A SHORT DNA FRAGMENT organism=Homo sapiens DNA sequence DA(D4):DT(C13) DA(D5):DT(C12) DA(D6):DT(C11) DA(D7):DT(C10) DT(D8):DA(C9) DA(D9):DT(C8) DA(D10):DT(C7) DA(D11):DT(C6) DC(D12):DG(C5) DA(D13):DT(C4) DA(D14):DT(C3) DT(D15):DA(C2) DA(G16):DT(F1) DA(D16):DT(C1) DA(F2):DT(G15) DT(F3):DA(G14) DT(F4):DA(G13) DG(F5):DC(G12) DT(F6):DA(G11) DT(F7):DA(G10) DT(F8):DA(G9) DA(F9):DT(G8) DT(F10):DA(G7) DT(F11):DA(G6) DT(F12):DA(G5) chainA ( 6) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 ( 9) ASN54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 ( 11) PHE56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 ( 12) MET57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 16 0 0 0 0 0 0 0 0 ( 19) ARG64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 ( 31) ASN76 0 0 0 0 0 0 0 0 0 0 0 0 3 7 8 0 0 0 0 0 0 0 0 0 0 ( 32) ALA77 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 ( 73) TYR118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 ( 75) PRO120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence sghikRpmNaFMvwskieRrkimeqspdmhNAeiSkrlgkrwkmlkdsekipfireaerlrlkhmadypdykYrPrk >6t78_AB: title=STRUCTURE OF HUMAN SOX11 TRANSCRIPTION FACTOR IN COMPLEX WITH A SHORT DNA FRAGMENT organism=Homo sapiens DNA sequence DA(D4):DT(C13) DA(D5):DT(C12) DA(D6):DT(C11) DA(D7):DT(C10) DT(D8):DA(C9) DA(D9):DT(C8) DA(D10):DT(C7) DA(D11):DT(C6) DC(D12):DG(C5) DA(D13):DT(C4) DA(D14):DT(C3) DT(D15):DA(C2) DA(G16):DT(F1) DA(D16):DT(C1) DA(F2):DT(G15) DT(F3):DA(G14) DT(F4):DA(G13) DG(F5):DC(G12) DT(F6):DA(G11) DT(F7):DA(G10) DT(F8):DA(G9) DA(F9):DT(G8) DT(F10):DA(G7) DT(F11):DA(G6) DT(F12):DA(G5) chainA ( 6) ARG51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 ( 9) ASN54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 ( 11) PHE56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 ( 12) MET57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 16 0 0 0 0 0 0 0 0 ( 19) ARG64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 ( 31) ASN76 0 0 0 0 0 0 0 0 0 0 0 0 3 7 8 0 0 0 0 0 0 0 0 0 0 ( 32) ALA77 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 ( 73) TYR118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 ( 75) PRO120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainB ( 4) ARG51 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ASN54 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) PHE56 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) MET57 0 0 0 0 0 0 0 0 0 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG64 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ASN76 0 0 0 0 0 0 0 0 0 0 0 8 7 4 0 0 0 0 0 0 0 0 0 0 0 ( 30) ALA77 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER80 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) TYR118 0 0 0 0 0 0 2 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sghikRpmNaFMvwskieRrkimeqspdmhNAeiSkrlgkrwkmlkdsekipfireaerlrlkhmadypdykYrPrk/hikRpmNaFMvwskieRrkimeqspdmhNAeiSkrlgkrwkmlkdsekipfireaerlrlkhmadypdykYrpr >6t79_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF A HUMAN NUCLEOSOME AT 3.2 A RESOLUTION organism=HOMO SAPIENS DNA sequence DC(J1):DG(I145) DA(J2):DT(I144) DC(J3):DG(I143) DG(J4):DC(I142) DT(J5):DA(I141) DG(J6):DC(I140) DT(J7):DA(I139) DG(J8):DC(I138) DC(J9):DG(I137) DT(J10):DA(I136) DC(J11):DG(I135) DT(J12):DA(I134) DT(J13):DA(I133) DC(J14):DG(I132) DC(J15):DG(I131) DG(J16):DC(I130) DA(J17):DT(I129) DT(J18):DA(I128) DC(J19):DG(I127) DT(J20):DA(I126) DC(J21):DG(I125) DC(J22):DG(I124) DG(J23):DC(I123) DA(J24):DT(I122) DG(J25):DC(I121) DT(J26):DA(I120) DG(J27):DC(I119) DT(J28):DA(I118) DC(J29):DG(I117) DG(J30):DC(I116) DT(J31):DA(I115) DT(J32):DA(I114) DA(J33):DT(I113) DG(J34):DC(I112) DG(J35):DC(I111) DC(J36):DG(I110) DA(J37):DT(I109) DT(J38):DA(I108) DT(J39):DA(I107) DA(J40):DT(I106) DA(J41):DT(I105) DG(J42):DC(I104) DC(J43):DG(I103) DT(J44):DA(I102) DG(J45):DC(I101) DA(J46):DT(I100) DA(J47):DT(I99) DC(J48):DG(I98) DG(J49):DC(I97) DC(J50):DG(I96) DA(J51):DT(I95) DC(J52):DG(I94) DA(J53):DT(I93) DA(J54):DT(I92) DA(J55):DT(I91) DG(J56):DC(I90) DG(J57):DC(I89) DA(J58):DT(I88) DA(J59):DT(I87) DC(J60):DG(I86) DA(J61):DT(I85) DA(J62):DT(I84) DA(J63):DT(I83) DA(J64):DT(I82) DT(J65):DA(I81) DA(J66):DT(I80) DA(J67):DT(I79) DA(J68):DT(I78) DC(J69):DG(I77) DA(J70):DT(I76) DA(J71):DT(I75) DT(J72):DA(I74) DA(J73):DT(I73) DC(J74):DG(I72) DC(J75):DG(I71) DA(J76):DT(I70) DC(J77):DG(I69) DC(J78):DG(I68) DG(J79):DC(I67) DA(J80):DT(I66) DA(J81):DT(I65) DA(J82):DT(I64) DC(J83):DG(I63) DA(J84):DT(I62) DA(J85):DT(I61) DA(J86):DT(I60) DG(J87):DC(I59) DA(J88):DT(I58) DA(J89):DT(I57) DT(J90):DA(I56) DT(J91):DA(I55) DA(J92):DT(I54) DG(J93):DC(I53) DA(J94):DT(I52) DA(J95):DT(I51) DT(J96):DA(I50) DA(J97):DT(I49) DG(J98):DC(I48) DT(J99):DA(I47) DA(J100):DT(I46) DT(J101):DA(I45) DA(J102):DT(I44) DA(J103):DT(I43) DC(J104):DG(I42) DG(J105):DC(I41) DC(J106):DG(I40) DT(J107):DA(I39) DA(J108):DT(I38) DA(J109):DT(I37) DC(J110):DG(I36) DA(J111):DT(I35) DA(J112):DT(I34) DA(J113):DT(I33) DC(J114):DG(I32) DA(J115):DT(I31) DT(J116):DA(I30) DA(J117):DT(I29) DA(J118):DT(I28) DA(J119):DT(I27) DT(J120):DA(I26) DT(J121):DA(I25) DA(J122):DT(I24) DG(J123):DC(I23) DA(J124):DT(I22) DT(J125):DA(I21) DC(J126):DG(I20) DG(J127):DC(I19) DG(J128):DC(I18) DA(J129):DT(I17) DA(J130):DT(I16) DG(J131):DC(I15) DA(J132):DT(I14) DG(J133):DC(I13) DC(J134):DG(I12) DG(J135):DC(I11) DT(J136):DA(I10) DC(J137):DG(I9) DG(J138):DC(I8) DT(J139):DA(I7) DG(J140):DC(I6) DT(J141):DA(I5) DA(J142):DT(I4) DG(J143):DC(I3) DA(J144):DT(I2) DT(J145):DA(I1) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 15) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/hrkvlrdniqgitkPairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kaRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/krHrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6t79_G:Histone-fold; title=STRUCTURE OF A HUMAN NUCLEOSOME AT 3.2 A RESOLUTION organism=? DNA sequence DA(I1):DT(J145) DT(I2):DA(J144) DC(I3):DG(J143) DT(I4):DA(J142) DA(I5):DT(J141) DC(I6):DG(J140) DA(I7):DT(J139) DC(I8):DG(J138) DG(I9):DC(J137) DA(I10):DT(J136) DC(I11):DG(J135) DG(I12):DC(J134) DC(I13):DG(J133) DT(I14):DA(J132) DC(I15):DG(J131) DT(I16):DA(J130) DT(I17):DA(J129) DC(I18):DG(J128) DC(I19):DG(J127) DG(I20):DC(J126) DA(I21):DT(J125) DT(I22):DA(J124) DC(I23):DG(J123) DT(I24):DA(J122) DA(I25):DT(J121) DA(I26):DT(J120) DT(I27):DA(J119) DT(I28):DA(J118) DT(I29):DA(J117) DA(I30):DT(J116) DT(I31):DA(J115) DG(I32):DC(J114) DT(I33):DA(J113) DT(I34):DA(J112) DT(I35):DA(J111) DG(I36):DC(J110) DT(I37):DA(J109) DT(I38):DA(J108) DA(I39):DT(J107) DG(I40):DC(J106) DC(I41):DG(J105) DG(I42):DC(J104) DT(I43):DA(J103) DT(I44):DA(J102) DA(I45):DT(J101) DT(I46):DA(J100) DA(I47):DT(J99) DC(I48):DG(J98) DT(I49):DA(J97) DA(I50):DT(J96) DT(I51):DA(J95) DT(I52):DA(J94) DC(I53):DG(J93) DT(I54):DA(J92) DA(I55):DT(J91) DA(I56):DT(J90) DT(I57):DA(J89) DT(I58):DA(J88) DC(I59):DG(J87) DT(I60):DA(J86) DT(I61):DA(J85) DT(I62):DA(J84) DG(I63):DC(J83) DT(I64):DA(J82) DT(I65):DA(J81) DT(I66):DA(J80) DC(I67):DG(J79) DG(I68):DC(J78) DG(I69):DC(J77) DT(I70):DA(J76) DG(I71):DC(J75) DG(I72):DC(J74) DT(I73):DA(J73) DA(I74):DT(J72) DT(I75):DA(J71) DT(I76):DA(J70) DG(I77):DC(J69) DT(I78):DA(J68) DT(I79):DA(J67) DT(I80):DA(J66) DA(I81):DT(J65) DT(I82):DA(J64) DT(I83):DA(J63) DT(I84):DA(J62) DT(I85):DA(J61) DG(I86):DC(J60) DT(I87):DA(J59) DT(I88):DA(J58) DC(I89):DG(J57) DC(I90):DG(J56) DT(I91):DA(J55) DT(I92):DA(J54) DT(I93):DA(J53) DG(I94):DC(J52) DT(I95):DA(J51) DG(I96):DC(J50) DC(I97):DG(J49) DG(I98):DC(J48) DT(I99):DA(J47) DT(I100):DA(J46) DC(I101):DG(J45) DA(I102):DT(J44) DG(I103):DC(J43) DC(I104):DG(J42) DT(I105):DA(J41) DT(I106):DA(J40) DA(I107):DT(J39) DA(I108):DT(J38) DT(I109):DA(J37) DG(I110):DC(J36) DC(I111):DG(J35) DC(I112):DG(J34) DT(I113):DA(J33) DA(I114):DT(J32) DA(I115):DT(J31) DC(I116):DG(J30) DG(I117):DC(J29) DA(I118):DT(J28) DC(I119):DG(J27) DA(I120):DT(J26) DC(I121):DG(J25) DT(I122):DA(J24) DC(I123):DG(J23) DG(I124):DC(J22) DG(I125):DC(J21) DA(I126):DT(J20) DG(I127):DC(J19) DA(I128):DT(J18) DT(I129):DA(J17) DC(I130):DG(J16) DG(I131):DC(J15) DG(I132):DC(J14) DA(I133):DT(J13) DA(I134):DT(J12) DG(I135):DC(J11) DA(I136):DT(J10) DG(I137):DC(J9) DC(I138):DG(J8) DA(I139):DT(J7) DC(I140):DG(J6) DA(I141):DT(J5) DC(I142):DG(J4) DG(I143):DC(J3) DT(I144):DA(J2) DG(I145):DC(J1) chainG ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >6t7a_C:Histone-fold; title=STRUCTURE OF HUMAN SOX11 TRANSCRIPTION FACTOR IN COMPLEX WITH A NUCLEOSOME organism=? DNA sequence DC(I23):DG(J123) DT(I24):DA(J122) DA(I25):DT(J121) DA(I26):DT(J120) DT(I27):DA(J119) DT(I28):DA(J118) DT(I29):DA(J117) DA(I30):DT(J116) DT(I31):DA(J115) DG(I32):DC(J114) DT(I33):DA(J113) DT(I34):DA(J112) DT(I35):DA(J111) DG(I36):DC(J110) DT(I37):DA(J109) DT(I38):DA(J108) DA(I39):DT(J107) DG(I40):DC(J106) DC(I41):DG(J105) DG(I42):DC(J104) DT(I43):DA(J103) DT(I44):DA(J102) DA(I45):DT(J101) DT(I46):DA(J100) DA(I47):DT(J99) DC(I48):DG(J98) DT(I49):DA(J97) DA(I50):DT(J96) DT(I51):DA(J95) DT(I52):DA(J94) DC(I53):DG(J93) DT(I54):DA(J92) DA(I55):DT(J91) DA(I56):DT(J90) DT(I57):DA(J89) DT(I58):DA(J88) DC(I59):DG(J87) DT(I60):DA(J86) DT(I61):DA(J85) DT(I62):DA(J84) DG(I63):DC(J83) DT(I64):DA(J82) DT(I65):DA(J81) DT(I66):DA(J80) DC(I67):DG(J79) DG(I68):DC(J78) DG(I69):DC(J77) DT(I70):DA(J76) DG(I71):DC(J75) DG(I72):DC(J74) DT(I73):DA(J73) DA(I74):DT(J72) DT(I75):DA(J71) DT(I76):DA(J70) DG(I77):DC(J69) DT(I78):DA(J68) DT(I79):DA(J67) DT(I80):DA(J66) DA(I81):DT(J65) DT(I82):DA(J64) DT(I83):DA(J63) DT(I84):DA(J62) DT(I85):DA(J61) DG(I86):DC(J60) DT(I87):DA(J59) DT(I88):DA(J58) DC(I89):DG(J57) DC(I90):DG(J56) DT(I91):DA(J55) DT(I92):DA(J54) DT(I93):DA(J53) DG(I94):DC(J52) DT(I95):DA(J51) DG(I96):DC(J50) DC(I97):DG(J49) DG(I98):DC(J48) DT(I99):DA(J47) DT(I100):DA(J46) DC(I101):DG(J45) DA(I102):DT(J44) DG(I103):DC(J43) DC(I104):DG(J42) DT(I105):DA(J41) DT(I106):DA(J40) DA(I107):DT(J39) DA(I108):DT(J38) DT(I109):DA(J37) DG(I110):DC(J36) DC(I111):DG(J35) DC(I112):DG(J34) DT(I113):DA(J33) DA(I114):DT(J32) DA(I115):DT(J31) DC(I116):DG(J30) DG(I117):DC(J29) chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >6t7c_G:Histone-fold; title=STRUCTURE OF TWO COPIES OF HUMAN SOX11 TRANSCRIPTION FACTOR IN COMPLEX WITH A NUCLEOSOME organism=HOMO SAPIENS DNA sequence DC(I23):DG(J123) DT(I24):DA(J122) DA(I25):DT(J121) DA(I26):DT(J120) DT(I27):DA(J119) DT(I28):DA(J118) DT(I29):DA(J117) DA(I30):DT(J116) DT(I31):DA(J115) DG(I32):DC(J114) DT(I33):DA(J113) DT(I34):DA(J112) DT(I35):DA(J111) DG(I36):DC(J110) DT(I37):DA(J109) DT(I38):DA(J108) DA(I39):DT(J107) DG(I40):DC(J106) DC(I41):DG(J105) DG(I42):DC(J104) DT(I43):DA(J103) DT(I44):DA(J102) DA(I45):DT(J101) DT(I46):DA(J100) DA(I47):DT(J99) DC(I48):DG(J98) DT(I49):DA(J97) DA(I50):DT(J96) DT(I51):DA(J95) DT(I52):DA(J94) DC(I53):DG(J93) DT(I54):DA(J92) DA(I55):DT(J91) DA(I56):DT(J90) DT(I57):DA(J89) DT(I58):DA(J88) DC(I59):DG(J87) DT(I60):DA(J86) DT(I61):DA(J85) DT(I62):DA(J84) DG(I63):DC(J83) DT(I64):DA(J82) DT(I65):DA(J81) DT(I66):DA(J80) DC(I67):DG(J79) DG(I68):DC(J78) DG(I69):DC(J77) DT(I70):DA(J76) DG(I71):DC(J75) DG(I72):DC(J74) DT(I73):DA(J73) DA(I74):DT(J72) DT(I75):DA(J71) DT(I76):DA(J70) DG(I77):DC(J69) DT(I78):DA(J68) DT(I79):DA(J67) DT(I80):DA(J66) DA(I81):DT(J65) DT(I82):DA(J64) DT(I83):DA(J63) DT(I84):DA(J62) DT(I85):DA(J61) DG(I86):DC(J60) DT(I87):DA(J59) DT(I88):DA(J58) DC(I89):DG(J57) DC(I90):DG(J56) DT(I91):DA(J55) DT(I92):DA(J54) DT(I93):DA(J53) DG(I94):DC(J52) DT(I95):DA(J51) DG(I96):DC(J50) DC(I97):DG(J49) DG(I98):DC(J48) DT(I99):DA(J47) DT(I100):DA(J46) DC(I101):DG(J45) DA(I102):DT(J44) DG(I103):DC(J43) DC(I104):DG(J42) DT(I105):DA(J41) DT(I106):DA(J40) DA(I107):DT(J39) DA(I108):DT(J38) DT(I109):DA(J37) DG(I110):DC(J36) DC(I111):DG(J35) DC(I112):DG(J34) DT(I113):DA(J33) DA(I114):DT(J32) DA(I115):DT(J31) DC(I116):DG(J30) DG(I117):DC(J29) chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >6t8g_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STALLED FTSK MOTOR DOMAIN BOUND TO DSDNA organism=PSEUDOMONAS AERUGINOSA PAO1 DNA sequence DA(H1):DT(G16) DT(H2):DA(G15) DA(H3):DT(G14) DT(H4):DA(G13) DA(H5):DT(G12) DT(H6):DA(G11) DA(H7):DT(G10) DT(H8):DA(G9) DA(H9):DT(G8) DT(H10):DA(G7) DA(H11):DT(G6) DT(H12):DA(G5) DA(H13):DT(G4) DT(H14):DA(G3) DA(H15):DT(G2) DT(H16):DA(G1) chainA (282) LYS606 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lpplslldpaevkqksyspesleamsrlleiklkefgvevsvdsvhpgpvitrfeiqpaagvkvsrisnlakdlarslavisvrvvevipgkttvgieipnedrqmvrfsevlsspeydehkstvplalghdiggrpiitdlakmphllvagttgsgksvgvnamllsilfkstpsearlimidpkmlelsiyegiphllcpvvtdmkeaanalrwsvaemerryrlmaamgvrnlagfnrkvkdaeeagtpltdpppqlstlptivvvvdefadmmmivgKkveeliariaqkaraagihlilatqrpsvdvitglikaniptriafqvsskidsrtildqggaeqllghgdmlylppgtglpirvhgafvsddevhrvveawklrgapdyiedil >6t8g_ABEF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STALLED FTSK MOTOR DOMAIN BOUND TO DSDNA organism=PSEUDOMONAS AERUGINOSA PAO1 DNA sequence DA(G1):DT(H16) DT(G2):DA(H15) DA(G3):DT(H14) DT(G4):DA(H13) DA(G5):DT(H12) DT(G6):DA(H11) DA(G7):DT(H10) DT(G8):DA(H9) DA(G9):DT(H8) DT(G10):DA(H7) DA(G11):DT(H6) DT(G12):DA(H5) DA(G13):DT(H4) DT(G14):DA(H3) DA(G15):DT(H2) DT(G16):DA(H1) chainA (282) LYS606 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 chainB chainE chainF prot.sequence lpplslldpaevkqksyspesleamsrlleiklkefgvevsvdsvhpgpvitrfeiqpaagvkvsrisnlakdlarslavisvrvvevipgkttvgieipnedrqmvrfsevlsspeydehkstvplalghdiggrpiitdlakmphllvagttgsgksvgvnamllsilfkstpsearlimidpkmlelsiyegiphllcpvvtdmkeaanalrwsvaemerryrlmaamgvrnlagfnrkvkdaeeagtpltdpppqlstlptivvvvdefadmmmivgKkveeliariaqkaraagihlilatqrpsvdvitglikaniptriafqvsskidsrtildqggaeqllghgdmlylppgtglpirvhgafvsddevhrvveawklrgapdyiedil/lpplslldpaevkqksyspesleamsrlleiklkefgvevsvdsvhpgpvitrfeiqpaagvkvsrisnlakdlarslavisvrvvevipgkttvgieipnedrqmvrfsevlsspeydehkstvplalghdiggrpiitdlakmphllvagttgsgksvgvnamllsilfkstpsearlimidpkmlelsiyegiphllcpvvtdmkeaanalrwsvaemerryrlmaamgvrnlagfnrkvkdaeeagtpltdplptivvvvdefadmmmivgkkveelIariaqkaraagihlilatqrpsvdvitglikaniptriafqvsskidsrtildqggaeqllghgdmlylppgtglpirvhgafvsddevhrvveawklrgapdyiedi/lpplslldpaevkqksyspesleamsrlleiklkefgvevsvdsvhpgpvitrfeiqpaagvkvsrisnlakdlarslavisvrvvevipgkttvgieipnedrqmvrfsevlsspeydehkstvplalghdiggrpiitdlakmphllvagttgsgksvgvnamllsilfkstpsearlimidpkmlelsiyegiphllcpvvtdmkeaanalrwsvaemerryrlmaamgvrnlagfnrkvkdaeeagtpltdpppqlstlptivvvvdefadmmmivgKkveeliariaqkaraagihlilatqrpsvdvitglikaniptriafqvsskidsrtildqggaeqllghgdmlylppgtglpirvhgafvsddevhrvveawklrgapdyiedil/lpplslldpaevkqksyspesleamsrlleiklkefgvevsvdsvhpgpvitrfeiqpaagvkvsrisnlakdlarslavisvrvvevipgkttvgieipnedrqmvrfsevlsspeydehkstvplalghdiggrpiitdlakmphllvagttgsgksvgvnamllsilfkstpsearlimidpkmlelsiyegiphllcpvvtdmkeaanalrwsvaemerryrlmaamgvrnlagfnrkvkdaeeagtpltdppqlstlptivvvvdefadmmmivgkKveeliariaqkaraagihlilatqrpsvdvitglikaniptriafqvsskidsrtildqggaeqllghgdmlylppgtglpirvhgafvsddevhrvveawklrgapdyiedil >6t90_L:HMG-box; title=OCT4-SOX2-BOUND NUCLEOSOME - SHL-6 organism=HOMO SAPIENS DNA sequence DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DA(J126):DT(I22) DT(J127):DA(I21) DT(J128):DA(I20) DT(J129):DA(I19) DG(J130):DC(I18) DC(J131):DG(I17) DA(J132):DT(I16) DT(J133):DA(I15) DA(J134):DT(I14) DA(J135):DT(I13) DC(J136):DG(I12) DA(J137):DT(I11) DA(J138):DT(I10) DA(J139):DT(I9) DG(J140):DC(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DC(J145):DG(I3) chainL ( 3) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 ( 6) ASN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 ( 8) PHE48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 ( 9) MET49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 9 0 0 0 0 0 0 0 ( 16) ARG56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 ( 27) HIS67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 ( 28) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 0 0 0 0 0 ( 32) SER72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 ( 70) TYR110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 prot.sequence vkRpmNaFMvwsrgqRrkmaqenpkmHNseiSkrlgaewkllsetekrpfideakrlralhmkehpdykYrprr >6t93_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME WITH OCT4-SOX2 MOTIF AT SHL-6 organism=HOMO SAPIENS DNA sequence DT(J-1):DA(I149) DC(J0):DG(I148) DA(J1):DT(I147) DC(J2):DG(I146) DA(J3):DT(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DA(J126):DT(I22) DT(J127):DA(I21) DT(J128):DA(I20) DT(J129):DA(I19) DG(J130):DC(I18) DC(J131):DG(I17) DA(J132):DT(I16) DT(J133):DA(I15) DA(J134):DT(I14) DA(J135):DT(I13) DC(J136):DG(I12) DA(J137):DT(I11) DA(J138):DT(I10) DA(J139):DT(I9) DG(J140):DC(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DC(J145):DG(I3) DA(J146):DT(I2) DG(J147):DC(I1) DG(J148):DC(I0) DA(J149):DT(I-1) chainA ( 3) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR42 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/lrDNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/lrDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6t93_H:Histone-fold; title=NUCLEOSOME WITH OCT4-SOX2 MOTIF AT SHL-6 organism=HOMO SAPIENS DNA sequence DT(J-1):DA(I149) DC(J0):DG(I148) DA(J1):DT(I147) DC(J2):DG(I146) DA(J3):DT(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DA(J126):DT(I22) DT(J127):DA(I21) DT(J128):DA(I20) DT(J129):DA(I19) DG(J130):DC(I18) DC(J131):DG(I17) DA(J132):DT(I16) DT(J133):DA(I15) DA(J134):DT(I14) DA(J135):DT(I13) DC(J136):DG(I12) DA(J137):DT(I11) DA(J138):DT(I10) DA(J139):DT(I9) DG(J140):DC(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DC(J145):DG(I3) DA(J146):DT(I2) DG(J147):DC(I1) DG(J148):DC(I0) DA(J149):DT(I-1) chainH ( 3) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6t9l_ABCDEFGH: title=SAGA DUB MODULE BOUND TO A UBIQITINATED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 62) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/kvLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/Ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/Niqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Aktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/Trkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6t9l_E:Histone-fold; title=SAGA DUB MODULE BOUND TO A UBIQITINATED NUCLEOSOME organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) chainE ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >6tbz_A:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF THE MH1 DOMAIN OF SMAD5-SMAD3 CHIMERA CONSTRUCT BOUND TO THE GGCGC SITE organism=HOMO SAPIENS DNA sequence DT(B1):DA(C16) DG(B2):DC(C15) DC(B3):DG(C14) DA(B4):DT(C13) DG(B5):DC(C12) DG(B6):DC(C11) DC(B7):DG(C10) DG(B8):DC(C9) DC(B9):DG(C8) DG(B10):DC(C7) DC(B11):DG(C6) DC(B12):DG(C5) DT(B13):DA(C4) DG(B14):DC(C3) DC(B15):DG(C2) DA(B16):DT(C1) chainA ( 65) ASP73 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 67) ARG75 0 0 0 0 0 0 0 0 0 0 1 11 5 0 0 0 ( 69) GLN77 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 ( 74) LYS82 0 0 0 0 0 0 0 0 3 6 3 0 0 0 0 0 prot.sequence spavkrllgwkqgeqngqeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrvespv >6tc9_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF MUTM FROM NEISSERIA MENINGITIDIS organism=Neisseria meningitidis alpha522 DNA sequence DG(B2):DC(D14) DG(B3):DC(D13) DT(B4):DA(D12) DA(B5):DT(D11) DG(B6):DC(D10) DA(B7):DT(D9) DC(B8):DG(D8) DC(B9):3DR(D7) DT(B10):DA(D6) DG(B11):DC(D5) DG(B12):DC(D4) DA(B13):DT(D3) chainA ( 32) ARG34 0 0 0 0 4 8 6 0 0 0 0 0 ( 73) MET75 0 0 0 0 0 0 18 0 0 0 0 0 (112) ARG114 0 0 0 0 0 0 0 15 33 0 0 0 (114) PHE116 0 0 0 0 0 0 78 15 0 0 0 0 (249) ARG265 0 0 0 0 0 2 4 0 0 0 0 0 prot.sequence pelpevettlrgiaphiegktveavvlrqllRwqinpdlgeilsgrqvlscgrrakyllirfqtgvllihlgMsgslriftpsdgrigrpdrhdhvdivfsdgtvmryrdpRkFgailwyegieehhplleklgpeplseafcadylyarlkaqkravklalmdnavvvgvgniyaneslfragisphrpanrlkkkecallvetvkavlqraietggyfqqeytvygrhnqpcprcgglvvketlgqRgtfycpncqk >6tce_A:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF THE GGCT SITE-BOUND MH1 DOMAIN OF SMAD5 CONTAINING A GGGS INSERTION IN THE LOOP1 organism=Homo sapiens DNA sequence DT(B1) DG(B2) DC(B3) DA(B4) DG(B5) DG(B6) DC(B7) DT(B8) DA(B9) DG(B10) DC(B11) DC(B12) DT(B13) DG(B14) DC(B15) DA(B16) chainA ( 60) ASP73 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 62) ARG75 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 64) GLN77 0 0 0 0 0 0 0 5 9 1 0 0 0 0 0 0 ( 69) LYS82 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 prot.sequence spavkrllgwkdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrvespvl >6ted_ABEZ:Translation_proteins_SH3-like_domain; title=STRUCTURE OF COMPLETE, ACTIVATED TRANSCRIPTION COMPLEX POL II-DSIF- PAF-SPT6 UNCOVERS ALLOSTERIC ELONGATION ACTIVATION BY RTF1 organism=HOMO SAPIENS / SUS SCROFA DNA sequence DG(T1):DC(N48) DC(T2):DG(N47) DT(T3):DA(N46) DC(T4):DG(N45) DC(T5):DG(N44) DC(T6):DG(N43) DA(T7):DT(N42) DG(T8):DC(N41) DC(T9):DG(N40) DT(T10):DA(N39) DC(T11):DG(N38) DC(T12):DG(N37) DC(T13):DG(N36) DT(T14):DA(N35) DG(T15):DC(N34) DC(T16):DG(N33) DT(T17):DA(N32) DG(T18):DC(N31) DG(T19):DC(N30) DC(T20):DG(N29) DT(T21):DA(N28) DC(T22):DG(N27) DC(T23):DG(N26) DG(T24):DC(N14) DA(T25):DG(N13) DG(T26):DG(N12) DT(T27):DC(N11) DG(T28):DG(N10) DG(T29):DA(N9) DG(T30):DG(N8) DT(T31):DA(N7) DT(T32):DG(N6) DC(T33):DT(N4) DT(T34):DA(N3) DG(T35):DC(N2) DC(T36):DC(N1) chainA (222) ASN272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 (281) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 10 0 (412) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (804) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 (805) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1327) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (454) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainZ prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmrNqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvspwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmgapaygawspsvgsgmtpgaagfpsaasd/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlppryllkfeqiylskpthwedgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrDgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtltkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq/dpnlwtvkckigeerataislmrkfiayqftdtplqiksvvapehvkgyiyveaykqthvkqaiegvgnlrlgywnqqmvpikemtdvlkvvkanlkpkswvrlkrgiykddiaqvdyvepsqntislkmipridydrikappqrlfdaekirslggdvasdgdflifegnrysrkgflfksfamsavitegvkptlselekfrehnfqpgdnvevcegelinlqgkilsvdgnkitimpkhedlkdmlefpaqelrkyfkmgdhvkviagrfegdtglivrveenfvilfsdltmhelkvlprdlqlcsetasgvdvggqhewgelvqldpqtvgvivrleretfqvlnmygkvvtvrhqavtrkkdnrfavaldseqnnihvkdivkvidgphsgregeirhlfrsfaflhckklvenggmfvcktrhlvlaneligqtvrisqgpykgyiGvvkdatestarvelhstcqtisvdrqrlttvgsrrpggmtstygrygsqpmygsg >6tem_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CENP-A NUCLEOSOME CORE PARTICLE WITH 145 BASE PAIRS OF THE WIDOM 601 SEQUENCE BY CRYO-EM organism=XENOPUS LAEVIS / HOMO SAPIENS DNA sequence DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) chainA chainB ( 12) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainF chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence wlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirg/dniqgitkpaiRrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/ksRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/wlKeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgl/niQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvll/srkesyaiyvykvlkqvhpdtgisskamSimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6tem_D:Histone-fold; title=CENP-A NUCLEOSOME CORE PARTICLE WITH 145 BASE PAIRS OF THE WIDOM 601 SEQUENCE BY CRYO-EM organism=? DNA sequence DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ksRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6tnz_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HUMAN POLYMERASE DELTA-FEN1-PCNA TOOLBELT organism=HOMO SAPIENS DNA sequence DA(T0):TTP(A1203) DG(T1):DOC(P25) DC(T2):DG(P24) DA(T3):DT(P23) DA(T4):DT(P22) DT(T5):DA(P21) DT(T6):DA(P20) DC(T7):DG(P19) DG(T8):DC(P18) DT(T9):DA(P17) DA(T10):DT(P16) DA(T11):DT(P15) DT(T12):DA(P14) DC(T13):DG(P13) DA(T14):DT(P12) DT(T15):DA(P11) DG(T16):DC(P10) DG(T17):DC(P9) DT(T18):DA(P8) DC(T19):DG(P7) DA(T20):DT(P6) DT(T21):DA(P5) DA(T22):DT(P4) DG(T23):DC(P3) chainA (354) GLN440 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (459) GLN551 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (512) SER604 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) SER605 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (515) TYR607 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (575) ARG667 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (602) LYS694 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (606) ASN698 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (607) SER699 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (609) TYR701 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (665) ASP757 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (715) LYS807 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (741) ARG833 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rwlrptppaldpqteplifqqleidhyvgpaqpvsvpvlrafgvtdegfsvcchihgfapyfytpappgfgpehmgdlqrelnlaisrdsrggreltgpavlavelcsresmfgyhghgpspflritvalprlvaparrlleqgirvaglgtpsfapyeanvdfeirfmvdtdivgcnwlelpagkyalrlkekatqcqleadvlwsdvvshppegpwqriaplrvlsfdiecagrkgifpeperdpviqicslglrwgepepflrlaltlrpcapilgakvqsyekeedllqawstfirimdpdvitgyniqnfdlpylisraqtlkvqtfpflgrvaglcsnirdssfqskQtgrrdtkvvsmvgrvqmdmlqvllreyklrsytlnavsfhflgehsiitdlqngndqtrrrlavyclkdaylplrllerlmvlvnavemarvtgvplsyllsrgQqvkvvsqllrqamhegllmpvvkseggedytgatvieplkgyydvpiatldfsslypsimmahnlcyttllrpgtaqklgltedqfirtptgdefvktsvrkgllpqilenllsarkrakaelaketdplrrqvldgrqlalkvsanSvygftgaqvgklpcleisqsvtgfgrqmiektkqlveskytvengystsakvvygdtdsvmcrfgvssvaeamalgreaadwvsghfpspirlefekvyfpylliskKryagllfssrpdahdrmdckgleavRrdncplvanlvtaslrrllidrdpegavahaqdvisdllcnridisqlvitkeltraasdyagkqahvelaermrkrdpgsapslgdrvpyviisaakgvaaymksedplfvlehslpidtqyyleqqlakpllrifepilgegraeavllrgdhtrcktvlgllafakrrnccigcrtvlshqgavcefcqpreselyqkevshlnaleerfsrlwtqcqrcqgslhedvictsrdcpifymrkkvrkdledqeqllrrfgppgpeaw >6tps_BQR: title=EARLY INTERMEDIATE RNA POLYMERASE I PRE-INITIATION COMPLEX - EIPIC organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(S1):DT(T53) DA(S2):DT(T52) DA(S3):DT(T51) DA(S4):DT(T50) DA(S5):DT(T49) DA(S6):DT(T48) DA(S7):DT(T47) DA(S8):DT(T46) DA(S9):DT(T45) DA(S10):DT(T44) DA(S11):DT(T43) DA(S12):DT(T42) DA(S13):DT(T41) DA(S14):DT(T40) DA(S15):DT(T39) DA(S16):DC(T38) DA(S17):DT(T37) DA(S18):DT(T36) DA(S19):DT(T35) DA(S20):DT(T34) DA(S21):DT(T33) DA(S22):DT(T32) DA(S23):DT(T31) DA(S24):DT(T30) DA(S25):DT(T29) chainB chainQ (142) GLN155 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) TYR210 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) GLU292 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) ARG293 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) HIS294 0 0 0 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) ARG297 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigekvifdgkplnsnsgylgnklsvsveqvsiakpmsndgvssaverkvypsesrqrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrgmainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyrfishfrmvhrgsffaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakklifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk/tfirgpicgtdncpsrlwriidgrrtcqyghvmegdvefnddetrrlnlttnatgsfqssqltnsqllqqqqrqshkkfkkligheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklQlhmtstisilylasthlslpvytcdyikwictakmpyfqaseilpkswriqlpnYyvsilegsispfngqlynkialtcgmihfkeffnseiscqglllklvmqcalppefyfytkqviefeetdirnltlwertdERHtgRvsnhaelrvlsyfmltinwmlsfdrdrqyplkwilsltesltqrtttsesigrnivkvvypdkptssdyfqwseeetleflkwmekqflptqtdqkiarrklykifpldsthqltfiedlqeryakqtpffpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhrmn/mfevpitltnRkfaqrrklkyqyinyisrrfdrisksdeerkfwkkyekpeksfeiwrtvssqnkqpinkqkmtyhnfkkiekiplrkmeipllhctkenklyfqsisrgleplktstsevrnyrtrhivtltdllhlnvsrhnwslaykifatliripgvqikslwgigveildnlsnsssgldflqwmcqiyssksrfvqninyrsivppfqtgsrthtakfaitylwsslincqksmlidkisewvltppfmedaevwfiyaschllkadtlsrqfvdikinqvikhihyvrtflkicldkggfavpsrlienqlksfesrl >6tps_Q: title=EARLY INTERMEDIATE RNA POLYMERASE I PRE-INITIATION COMPLEX - EIPIC organism=? DNA sequence DT(T27):DA(S27) DT(T28):DA(S26) DT(T29):DA(S25) DT(T30):DA(S24) DT(T31):DA(S23) DT(T32):DA(S22) DT(T33):DA(S21) DT(T34):DA(S20) DT(T35):DA(S19) DT(T36):DA(S18) DT(T37):DA(S17) DC(T38):DA(S16) DT(T39):DA(S15) DT(T40):DA(S14) DT(T41):DA(S13) DT(T42):DA(S12) DT(T43):DA(S11) DT(T44):DA(S10) DT(T45):DA(S9) DT(T46):DA(S8) DT(T47):DA(S7) DT(T48):DA(S6) DT(T49):DA(S5) DT(T50):DA(S4) DT(T51):DA(S3) DT(T52):DA(S2) DT(T53):DA(S1) chainQ (142) GLN155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (197) TYR210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (279) GLU292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (280) ARG293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (281) HIS294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 6 0 0 0 (284) ARG297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence tfirgpicgtdncpsrlwriidgrrtcqyghvmegdvefnddetrrlnlttnatgsfqssqltnsqllqqqqrqshkkfkkligheakllflksfqfilkrqirwlitemrfpkefehvakiiwlkilktindqpqeelklQlhmtstisilylasthlslpvytcdyikwictakmpyfqaseilpkswriqlpnYyvsilegsispfngqlynkialtcgmihfkeffnseiscqglllklvmqcalppefyfytkqviefeetdirnltlwertdERHtgRvsnhaelrvlsyfmltinwmlsfdrdrqyplkwilsltesltqrtttsesigrnivkvvypdkptssdyfqwseeetleflkwmekqflptqtdqkiarrklykifpldsthqltfiedlqeryakqtpffpparkeaigrllthiasqllvdfaiskeqlkdcisriknaclhrmn >6tqn_GXY: title=RRN ANTI-TERMINATION COMPLEX WITHOUT S4 organism=ESCHERICHIA COLI DNA sequence DC(K-19):DG(L19) DC(K-18):DG(L18) DG(K-17):DC(L17) DA(K-16):DT(L16) DG(K-15):DC(L15) DC(K-14):DG(L14) DA(K-13):DT(L13) DG(K-12):DC(L12) DC(K-11):DG(L11) DA(K-10):DC(L10) DT(K-9):DG(L9) DA(K-8):DC(L8) DC(K-6):DA(L7) DA(K-5):DC(L6) DT(K-4):DA(L5) DT(K-3):DC(L4) DA(K-2):DC(L3) DC(K-1):DG(L2) DT(K0):DA(L0) DT(K1):DA(L-1) DG(K2):DC(L-2) DT(K3):DA(L-3) DG(K4):DC(L-4) DA(K5):DT(L-5) DG(K6):DC(L-6) DC(K7):DG(L-7) DG(K8):DC(L-8) DG(K9):DC(L-9) DA(K10):DT(L-10) DT(K11):DA(L-11) DA(K12):DT(L-12) DA(K13):DT(L-13) DC(K14):DG(L-14) chainG ( 12) PHE15 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG57 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainX (163) LYS163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ASN173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG470 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainY (246) ALA261 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) SER319 0 0 0 0 0 0 0 0 2 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) LYS321 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence apkkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqRrkserkffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqveka/mvysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgKthssgkvlyNaRiipyrgsWlDfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrEragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfAtsdlndlyRRvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSnKrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >6tqn_X:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RRN ANTI-TERMINATION COMPLEX WITHOUT S4 organism=ESCHERICHIA COLI DNA sequence DC(K-19):DG(L19) DC(K-18):DG(L18) DG(K-17):DC(L17) DA(K-16):DT(L16) DG(K-15):DC(L15) DC(K-14):DG(L14) DA(K-13):DT(L13) DG(K-12):DC(L12) DC(K-11):DG(L11) DA(K-10):DC(L10) DT(K-9):DG(L9) DA(K-8):DC(L8) DC(K-6):DA(L7) DA(K-5):DC(L6) DT(K-4):DA(L5) DT(K-3):DC(L4) DA(K-2):DC(L3) DC(K-1):DG(L2) DT(K0):DA(L0) DT(K1):DA(L-1) DG(K2):DC(L-2) DT(K3):DA(L-3) DG(K4):DC(L-4) DA(K5):DT(L-5) DG(K6):DC(L-6) DC(K7):DG(L-7) DG(K8):DC(L-8) DG(K9):DC(L-9) DA(K10):DT(L-10) DT(K11):DA(L-11) DA(K12):DT(L-12) DA(K13):DT(L-13) DC(K14):DG(L-14) chainX (163) LYS163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ASN173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG470 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mvysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgKthssgkvlyNaRiipyrgsWlDfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrEragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6tqo_G:N-utilization_substance_G_protein_NusG,_N-terminal_domain;Translation_proteins_SH3-like_domain; title=RRN ANTI-TERMINATION COMPLEX organism=ESCHERICHIA COLI DNA sequence DC(K-19):DG(L19) DC(K-18):DG(L18) DG(K-17):DC(L17) DA(K-16):DT(L16) DG(K-15):DC(L15) DC(K-14):DG(L14) DA(K-13):DT(L13) DG(K-12):DC(L10) DC(K-11):DG(L9) DA(K-10):DC(L8) DT(K-9):DA(L7) DC(K-6):DC(L6) DA(K-5):DA(L5) DT(K-4):DC(L4) DT(K-3):DC(L3) DA(K-2):DG(L2) DC(K-1):DT(L1) DT(K0):DA(L0) DT(K1):DA(L-1) DG(K2):DC(L-2) DT(K3):DA(L-3) DG(K4):DC(L-4) DA(K5):DT(L-5) DG(K6):DC(L-6) DC(K7):DG(L-7) DG(K8):DC(L-8) DG(K9):DC(L-9) DA(K10):DT(L-10) DT(K11):DA(L-11) DA(K12):DT(L-12) DA(K13):DT(L-13) DC(K14):DG(L-14) chainG ( 54) ARG57 15 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) MET90 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence apkkrwyvvqafsgfegrvatslrehiklhnmedlfgevmvpteevveirggqRrkserkffpgyvlvqmvmndaswhlvrsvprvMgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqveka >6tqo_GXY: title=RRN ANTI-TERMINATION COMPLEX organism=ESCHERICHIA COLI DNA sequence DG(L-14):DC(K14) DT(L-13):DA(K13) DT(L-12):DA(K12) DA(L-11):DT(K11) DT(L-10):DA(K10) DC(L-9):DG(K9) DC(L-8):DG(K8) DG(L-7):DC(K7) DC(L-6):DG(K6) DT(L-5):DA(K5) DC(L-4):DG(K4) DA(L-3):DT(K3) DC(L-2):DG(K2) DA(L-1):DT(K1) DA(L0):DT(K0) DT(L1):DC(K-1) DG(L2):DA(K-2) DC(L3):DT(K-3) DC(L4):DT(K-4) DA(L5):DA(K-5) DC(L6):DC(K-6) DA(L7):DT(K-9) DC(L8):DA(K-10) DG(L9):DC(K-11) DC(L10):DG(K-12) DG(L11):DA(K-13) DC(L12):DC(K-14) DT(L13):DG(K-15) DG(L14):DA(K-16) DC(L15):DG(K-17) DT(L16):DC(K-18) DC(L17):DC(K-19) chainG ( 87) MET90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 chainX (173) ASN173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (473) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (541) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (542) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainY (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (301) ILE316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (306) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence apkkrwyvvqafsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvMgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqveka/mvysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlyNaRiipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveRavkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraItgsnKrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >6tuo_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF ARCHAEOGLOBUS FULGIDUS ARGONAUTE PROTEIN WITH COGNATE DNA OLIGODUPLEX 5'-PATTGTACGTACAAT organism=? DNA sequence DA(S1):DT(R14) DT(S2):DA(R13) DT(S3):DA(R12) DG(S4):DC(R11) DT(S5):DA(R10) DA(S6):DT(R9) DC(S7):DG(R8) DG(S8):DC(R7) DT(S9):DA(R6) DA(S10):DT(R5) DC(S11):DG(R4) DA(S12):DT(R3) DA(S13):DT(R2) chainA (134) ILE143 0 0 0 0 0 0 0 0 0 0 0 0 1 (138) ARG147 0 0 0 0 0 0 0 0 0 0 9 11 14 (142) PHE151 0 0 0 0 0 0 0 0 0 0 0 0 23 (143) TYR152 0 0 0 0 0 0 0 0 0 0 0 0 11 (146) ASN155 0 0 0 0 0 0 0 0 0 0 0 0 6 (361) ARG383 0 0 0 0 0 0 0 0 0 0 0 5 6 prot.sequence gltyrigngasvpisntgelikglrnygpyevpslkynqialihnnqfsslinqlksqisskidevwhihninisefiydsphfdsiksqvdnaidtgvdgimlvlpeyntplyyklksylinsipsqfmrydIlsnRnltFYvdNllvqfvsklggkpwilnvdpekgsdiiigtgatridnvnlfcfamvfkkdgtmlwneispivtsseyltylkstikkvvygfkksnpdwdvekltlhvsgkrpkmkdgetkilketveelkkqemvsrdvkyailhlnethpfwvmhpyegtkvklsskrylltllqpylmvtpikplsveivsdnwtseeyyhnvheildeiyylskmnwrgfRsrnlpvtvnypklvagiianvnryggypinpegnrslqtnpwfl >6tye_CDF: title=CRYSTAL STRUCTURE OF MTB SIGMA L TRANSCRIPTION INITIATION COMPLEX WITH 5 NT LONG RNA PRIMER organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DT(H16):DA(G13) DC(H17):DG(G12) DA(H18):DT(G11) DC(H19):DG(G10) DG(H20):DC(G9) DG(H21):DC(G8) DA(H22):DT(G7) DT(H23):DA(G6) DG(H24):DC(G5) DC(H25):DG(G4) chainF chainC (439) GLU466 1 0 0 0 0 0 0 0 0 0 (440) ARG467 3 0 0 0 0 0 0 0 0 0 chainD (282) GLN287 0 0 0 0 0 0 0 0 0 5 (286) ARG291 0 0 0 0 0 0 0 1 4 1 prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaie/ffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/vsgaaaaeaalmralydehaavlwryalrltgdaaqaedvvqetllrawqhpevigdtarparawlftvarnmiiderrsarfrnvvgstdqsgtpeqstpdevnaaldrlliadalaqlsaehraviqrqiatdlgiaegtvksrlhyavralrltlqelgv >6tyf_CDF: title=CRYSTAL STRUCTURE OF MTB SIGMA L TRANSCRIPTION INITIATION COMPLEX WITH 6 NT LONG RNA PRIMER organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DG(G4):DC(H25) DC(G5):DG(H24) DA(G6):DT(H23) DT(G7):DA(H22) DC(G8):DG(H21) DC(G9):DG(H20) DG(G10):DC(H19) DT(G11):DA(H18) DG(G12):DC(H17) DA(G13):DT(H16) chainC (439) GLU466 0 0 0 0 0 0 0 0 0 1 (440) ARG467 0 0 0 0 0 0 0 0 0 1 chainD (282) GLN287 4 0 0 0 0 0 0 0 0 0 (286) ARG291 8 7 1 0 0 0 0 0 0 0 chainF prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaie/ffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/vsgaaaaeaalmralydehaavlwryalrltgdaaqaedvvqetllrawqhpevigdtarparawlftvarnmiiderrsarfrnvvgstdqsgtpeqstpdevnaaldrlliadalaqlsaehraviqrsyyrgwstaqiatdlgiaegtvksrlhyavralrltlqelgvtr >6tyg_CDF: title=CRYSTAL STRUCTURE OF MTB SIGMA L TRANSCRIPTION INITIATION COMPLEX WITH 9 NT LONG RNA PRIMER organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DT(H16):DA(G13) DC(H17):DG(G12) DA(H18):DT(G11) DC(H19):DG(G10) DG(H20):DC(G9) DG(H21):DC(G8) DA(H22):DT(G7) DT(H23):DA(G6) DG(H24):DC(G5) DC(H25):DG(G4) chainF chainC (439) GLU466 1 0 0 0 0 0 0 0 0 0 (440) ARG467 2 0 0 0 0 0 0 0 0 0 chainD (282) GLN287 0 0 0 0 0 0 0 0 0 9 (286) ARG291 0 0 0 0 0 0 0 5 7 6 prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaie/ffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa/vsgaaaaeaalmralydehaavlwryalrltgdaaqaedvvqetllrawqhpevigdtarparawlftvarnmiiderrsarqstpdevnaaldrlliadalaqlsaehraviqriatdlgiaegtvksrlhyavralrltlqelgv >6tyg_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF MTB SIGMA L TRANSCRIPTION INITIATION COMPLEX WITH 9 NT LONG RNA PRIMER organism=? DNA sequence DT(H16):DA(G13) DC(H17):DG(G12) DA(H18):DT(G11) DC(H19):DG(G10) DG(H20):DC(G9) DG(H21):DC(G8) DA(H22):DT(G7) DT(H23):DA(G6) DG(H24):DC(G5) DC(H25):DG(G4) chainD (282) GLN287 0 0 0 0 0 0 0 0 0 9 (286) ARG291 0 0 0 0 0 0 0 5 7 6 prot.sequence ffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa >6u0m_25:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF THE S. CEREVISIAE REPLICATIVE HELICASE CMG IN COMPLEX WITH A FORKED DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(F4) DA(F5) DT(F6) DC(F7) DG(F8) DA(F9) DT(F10) DC(F11) DG(F12) DA(F13) DT(F14) DA(F15) DA(F16) DA(F17) DG(F18) DT(F19) DT(F20) DT(F21) DT(F22) DT(F23) DT(F24) DT(F25) DT(F26) chain2 (389) TRP589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chain5 (362) ARG455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 prot.sequence pnvsrtiarelksflleytdetgrsvygarirtlgemnseslevnyrhlaeskailalflakcpeemlkifdlvameatelhypdyarihseihvrisdfptiyslrelresnlsslvrvtgvvtrrtgvfpqlkyvkfnclkcgsilgpffqdsneeirisfctnckskgpfrvngektvyrnyqrvtlqeapgtvppgrlprhrevilladlvdvskpgeevevtgiyknnydgnlnakngfpvfatiieansikrregntanegeegldvfswteeeerefrkisrdrgiidkiissmapsiyghrdiktavacslfggvpknvngkhsirgdinvlllgdpgtaksqilkyvektahravfatgqgasavgltasvrkdpitkeWtleggalvladkgvclidefdkmndqdrtsiheameqqsisiskagivttlqarcsiiaaanpnggrynstlplaqnvsltepilsrfdilcvvrdlvdeeaderlatfvvdshvrsqlnarqrrlqrqrkkeeeispipqellmkyihyartkiypklhqmdmdkvsrvyadlrresistgsfpitvrhlesilriaesfakmrlsefvssydldraikvvvdsfvdaqkvsvrrqlrrsfaiy/nteiiksfknfilefrldsqfiyrdqlrnnilvknysltvnmehligynediykklsdepsdiiplfetaitqvakrisinslptfqlilnsnanqiplrdldsehvskivrlsgiiistsvlssratylsimcrncrhttsitinnfntgntvslprscncgpdpyiiihesskfidqqflklqeipelvpvgemprnltmtcdryltnkvipgtrvtivgiysiynsknsgvairtpyikilgiqsdvetvtmfteeeeeeflqlsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllgdpgtaksqllkfvekvspiavytsgkgssaagltasvqRdpmtrefyleggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanpiygryddlkspgdnidfqttilsrfdmifivkddhneerdisianhvinihtgnanamqnqqeengseisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinelesterpitirqleaiiriteslaklelspiaqerhvdeairlfqastmdaas >6u15_A:Uracil-DNA_glycosylase-like; title=HUMAN THYMINE DNA GLYCOSYLASE N140A MUTANT BOUND TO DNA WITH 2'-F-5- CARBOXYL-DC SUBSTRATE ANALOG organism=Homo sapiens DNA sequence DA(D1):DT(C28) DG(D2):DC(C27) DC(D3):DG(C26) DT(D4):DA(C25) DG(D5):DC(C24) DT(D6):DA(C23) DC(D7):DG(C22) DC(D8):DG(C21) DA(D9):DT(C20) DT(D10):DA(C19) DC(D11):DG(C18) DG(D12):DC(C17) DC(D13):DG(C16) DT(D14):DA(C15) DC(D15):DG(C14) DA(D16):DT(C13) DG(D18):DC(C11) DT(D19):DA(C10) DA(D20):DT(C9) DC(D21):DG(C8) DA(D22):DT(C7) DG(D23):DC(C6) DA(D24):DT(C5) DG(D25):DC(C4) DC(D26):DG(C3) DT(D27):DA(C2) DG(D28):DC(C1) chainA ( 92) SER200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 93) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 (166) ALA274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (167) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 0 0 0 0 (168) ALA277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (169) GLN278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 prot.sequence drfngvseaelltktlpdiltfnldiviigiapglmaaykghhypgpgnHfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARAQfpraqdkvhyyiklkdlrdqlkgie >6u16_A:Uracil-DNA_glycosylase-like; title=HUMAN THYMINE DNA GLYCOSYLASE N140A MUTANT BOUND TO DNA WITH 5- CARBOXYL-DC SUBSTRATE organism=Homo sapiens DNA sequence DC(C1):DG(D28) DA(C2):DT(D27) DG(C3):DC(D26) DC(C4):DG(D25) DT(C5):DA(D24) DC(C6):DG(D23) DT(C7):DA(D22) DG(C8):DC(D21) DT(C9):DA(D20) DA(C10):DT(D19) DC(C11):DG(D18) DT(C13):DA(D16) DG(C14):DC(D15) DA(C15):DT(D14) DG(C16):DC(D13) DC(C17):DG(D12) DG(C18):DC(D11) DA(C19):DT(D10) DT(C20):DA(D9) DG(C21):DC(D8) DG(C22):DC(D7) DA(C23):DT(D6) DC(C24):DG(D5) DA(C25):DT(D4) DG(C26):DC(D3) DC(C27):DG(D2) DT(C28):DA(D1) chainA ( 93) SER200 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) LYS201 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ALA274 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG275 0 0 0 0 0 0 0 0 0 0 12 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ALA277 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) GLN278 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vdrfngvseaelltktlpdiltfnldiviigiapglmaaykghhypgpgnhfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARAQfpraqdkvhyyiklkdlrdqlkgiern >6u17_A:Uracil-DNA_glycosylase-like; title=HUMAN THYMINE DNA GLYCOSYLASE BOUND TO DNA WITH 2'-F-5-CARBOXYL-DC SUBSTRATE ANALOG organism=Homo sapiens DNA sequence DA(D1):DT(C28) DG(D2):DC(C27) DC(D3):DG(C26) DT(D4):DA(C25) DG(D5):DC(C24) DT(D6):DA(C23) DC(D7):DG(C22) DC(D8):DG(C21) DA(D9):DT(C20) DT(D10):DA(C19) DC(D11):DG(C18) DG(D12):DC(C17) DC(D13):DG(C16) DT(D14):DA(C15) DC(D15):DG(C14) DA(D16):DT(C13) DG(D18):DC(C11) DT(D19):DA(C10) DA(D20):DT(C9) DC(D21):DG(C8) DA(D22):DT(C7) DG(D23):DC(C6) DA(D24):DT(C5) DG(D25):DC(C4) DC(D26):DG(C3) DT(D27):DA(C2) DG(D28):DC(C1) chainA ( 94) SER200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 ( 95) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 (168) ALA274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (169) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 0 0 0 0 (170) ALA277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (171) GLN278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 1 0 0 0 0 0 0 0 0 prot.sequence kvdrfngvseaelltktlpdiltfnldiviiginpglmaaykghhypgpgnHfwkclfmsglsevqlnhmddhtlpgkygigftnmverttpgSKdlsskefreggrilvqklqkyqpriavfngkciyeifskevfgvkvknlefglqphkipdtetlcyvmpsssARAQfpraqdkvhyyiklkdlrdqlkgie >6u2o_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA MISINSERTING DAMPNPP OPPOSITE THE 5'G OF THE CISPLATIN PT-GG INTRASTRAND CROSSLINK organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DG(D3):DC(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 27) HIS34 41 0 0 0 0 ( 28) LYS35 9 0 0 0 0 ( 31) ALA38 4 0 0 0 0 prot.sequence qetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6u6b_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA MISINSERTING DAMPNPP OPPOSITE THE 5'G OF THE CISPLATIN PT-GG INTRASTRAND CROSSLINK WITH MANGANESE IN THE ACTIVE SITE organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DG(D3):DC(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 36 0 0 0 0 ( 26) LYS35 10 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpsknekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6u7t_A:DNA-glycosylase;Nudix; title=MUTY ADENINE GLYCOSYLASE BOUND TO DNA CONTAINING A TRANSITION STATE ANALOG (1N) PAIRED WITH D(8-OXO-G) organism=Geobacillus stearothermophilus DNA sequence DA(B2):DT(C22) DG(B3):DC(C21) DA(B4):DT(C20) DC(B5):DG(C19) 8OG(B6):NR1(C18) DT(B7):DA(C17) DG(B8):DC(C16) DG(B9):DC(C15) DA(B10):DT(C14) DC(B11):DG(C13) chainA ( 42) GLN48 0 0 0 50 4 4 0 0 0 0 ( 43) THR49 0 0 0 0 4 0 0 0 0 0 ( 44) ARG50 0 0 0 0 0 1 0 6 0 0 ( 82) TYR88 0 0 0 74 42 0 0 0 0 0 ( 85) ARG91 0 0 0 0 1 0 0 0 0 0 (296) PHE307 0 0 0 0 2 0 0 0 0 0 (297) SER308 0 0 0 8 9 2 0 0 0 0 (298) HIS309 0 0 0 10 0 0 0 0 0 0 prot.sequence rfparefqrdlldwfarerrdlpwrkdrdpykvwvsevmlQQtRvetvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavdgnvmrvlsrlflvtddiakpstrkrfeqivreimayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqvplavavladdegrvlirkrdstgllanlwefpscetdgadgkekleqmvgeqeltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >6u81_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE DOUBLE HOMEODOMAIN OF DUX4 IN COMPLEX WITH A DNA APTAMER organism=Homo sapiens DNA sequence DT(C1):DA(B17) DG(C2):DC(B16) DT(C3):DA(B15) DT(C4):DA(B14) DG(C5):DC(B13) DA(C6):DT(B12) DT(C7):DA(B11) DT(C8):DA(B10) DA(C9):DT(B9) DG(C10):DC(B8) chainA ( 50) GLN68 0 0 0 0 0 0 0 3 0 0 ( 54) SER72 0 0 0 0 0 0 0 0 0 4 ( 77) ARG95 0 0 0 0 4 5 0 0 0 0 ( 80) ARG98 0 0 12 9 6 0 0 0 0 0 (122) ILE140 0 0 0 0 0 2 2 0 0 0 (125) GLN143 0 0 0 0 0 0 0 0 6 1 (126) ASN144 0 0 0 0 5 11 2 0 0 0 (130) ARG148 0 0 0 16 13 7 0 0 0 0 prot.sequence grrrrlvwtpsqsealracfernpypgiatrerlaqaigipeprvqiwfQnerSrqlrqhrresrpwpgrrgppegRrkRtavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrraRhp >6u82_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE DOUBLE HOMEODOMAIN OF DUX4 IN COMPLEX WITH A DNA APTAMER CONTAINING BULGE AND LOOP organism=Homo sapiens DNA sequence DG(B1):DC(B38) DC(B2):DG(B37) DT(B3):DA(B36) DA(B4):DT(B35) DA(B5):DT(B34) DT(B6):DA(B33) DC(B7):DG(B29) DT(B8):DA(B28) DA(B9):DT(B27) DA(B10):DT(B26) DT(B11):DA(B25) DC(B12):DG(B24) DA(B13):DT(B23) DA(B14):DT(B22) DC(B15):DG(B21) DC(B16):DG(B20) DG(B17):DA(B19) chainA ( 2) ARG20 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG23 0 17 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ILE65 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 50) GLN68 0 0 0 0 0 0 1 6 6 0 0 0 0 0 0 0 0 ( 51) ASN69 0 0 0 2 5 3 0 0 0 0 0 0 0 0 0 0 0 ( 54) SER72 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 77) ARG95 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 80) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (122) ILE140 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (125) GLN143 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 (126) ASN144 0 0 0 0 0 0 0 0 0 1 9 3 0 0 0 0 0 (130) ARG148 0 0 0 0 0 0 0 0 0 0 2 8 13 0 0 0 0 prot.sequence gRrrRlvwtpsqsealracfernpypgiatrerlaqaigipeprvqIwfQNerSrqlrqhrresrpwpgrrgppegRrkRtavtgsqtalllrafekdrfpgiaareelaretglpesriqIwfQNrraRhp >6u8p_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3B-DNMT3L IN COMPLEX WITH CPGPA DNA organism=HOMO SAPIENS DNA sequence DC(F423):DG(E446) DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DG(F428):DC(E441) DA(F429):DT(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DT(F440):DA(E429) DC(F441):DG(E428) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainA ( 94) ASN656 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) VAL657 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ASN658 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) PRO659 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) THR775 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) LYS777 0 0 0 0 2 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 5 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVNParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6u8p_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3B-DNMT3L IN COMPLEX WITH CPGPA DNA organism=HOMO SAPIENS DNA sequence DC(F423):DG(E446) DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DG(F428):DC(E441) DA(F429):DT(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DT(F440):DA(E429) DC(F441):DG(E428) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainA ( 94) ASN656 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) VAL657 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ASN658 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) PRO659 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) THR775 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) LYS777 0 0 0 0 2 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 5 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 94) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 ( 95) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 ( 97) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (213) THR775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (215) LYS777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 3 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 5 0 0 0 0 (225) GLN787 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVNParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface/lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtKSNsikqgknQlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6u8q_AJP:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=CRYOEM STRUCTURE OF HIV-1 CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DG(G18):DC(H20) DC(G19):DG(H19) DT(G20):DA(H18) DA(G21):DT(H17) DG(G22):DC(H16) DA(G23):DT(H15) DG(G24):DC(H14) DA(G25):DT(H13) DT(G26):DA(H12) DT(G27):DA(H11) DT(G28):DA(H10) DT(G29):DA(H9) DC(G30):DG(H8) DC(G31):DG(H7) DC(G32):DG(H6) DG(G33):DC(H5) DC(G34):DG(H4) DC(G35):DG(H3) DC(G36):DG(H2) DA(G37):DT(H1) DC(G38):DG(H0) DG(G39):DC(H-1) chainA ( 51) HIS51 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ chainP prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiird/cspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklaGrwpvktvhtdngsnftsttvkaacwwagikqefsmnkelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelQkqitkIQnfRvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiirdygkqma/cspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklaGrwpvktvhtdngsnftsttvkaacwwagikqefgviesmnkelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqNfrvyyRDsrDpvwkgpakllwkgegavviqdnsdikvvprrkakii >6u8q_CIM:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=CRYOEM STRUCTURE OF HIV-1 CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DC(F-1):DG(E39) DG(F0):DC(E38) DT(F1):DA(E37) DG(F2):DC(E36) DG(F3):DC(E35) DG(F4):DC(E34) DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainC ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 chainI chainM prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiird/cspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklaGrwpvktvhtdngsnftsttvkaacwwagikqefsmnkelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelQkqitkIQnfRvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiirdygkqma/cspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklaGrwpvktvhtdngsnftsttvkaacwwagikqefgviesmnkelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqNfrvyyRDsrDpvwkgpakllwkgegavviqdnsdikvvprrkakiird >6u8v_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3B-DNMT3L IN COMPLEX WITH CPGPT DNA organism=HOMO SAPIENS DNA sequence DC(E423):DG(F446) DA(E424):DT(F445) DT(E425):DA(F444) DG(E426):DC(F443) DG(E428):DC(F441) DT(E429):DA(F440) DT(E430):DA(F439) DC(E431):DG(F438) DT(E432):DA(F437) DA(E433):DT(F436) DA(E434):DT(F435) DT(E435):DA(F434) DT(E436):DA(F433) DA(E437):DT(F432) DG(E438):DC(F431) DA(E439):DT(F430) DA(E440):DT(F429) DC(E441):DG(F428) DC(E443):DG(F426) DA(E444):DT(F425) DT(E445):DA(F424) DG(E446):DC(F423) chainA ( 94) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 ( 95) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 ( 97) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (213) THR775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (215) LYS777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 4 2 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 5 0 0 0 0 prot.sequence lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6u8v_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3B-DNMT3L IN COMPLEX WITH CPGPT DNA organism=HOMO SAPIENS DNA sequence DC(F423):DG(E446) DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DG(F428):DC(E441) DT(F429):DA(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DA(F440):DT(E429) DC(F441):DG(E428) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainA ( 94) ASN656 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) VAL657 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) PRO659 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) THR775 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) LYS777 0 0 0 0 2 4 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 5 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 94) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 ( 95) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 ( 97) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (215) LYS777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 5 2 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 5 0 0 0 0 prot.sequence lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface/lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtittKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6u8w_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3B(K777A)-DNMT3L IN COMPLEX WITH CPGPT DNA organism=HOMO SAPIENS DNA sequence DC(F423):DG(E446) DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DG(F428):DC(E441) DT(F429):DA(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DA(F440):DT(E429) DC(F441):DG(E428) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainA ( 94) ASN656 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) VAL657 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) PRO659 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) THR775 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ALA777 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 5 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 94) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 95) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 ( 97) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (213) THR775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (215) ALA777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 5 0 0 0 0 prot.sequence lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtASNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface/lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtASNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6u8w_D:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3B(K777A)-DNMT3L IN COMPLEX WITH CPGPT DNA organism=? DNA sequence DC(F423):DG(E446) DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DG(F428):DC(E441) DT(F429):DA(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DA(F440):DT(E429) DC(F441):DG(E428) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainD ( 94) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 95) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 ( 97) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (213) THR775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (215) ALA777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 5 0 0 0 0 prot.sequence lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtASNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6u8x_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3B-DNMT3L IN COMPLEX WITH CPAPG DNA organism=HOMO SAPIENS DNA sequence DC(F423):DG(E446) DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DA(F428):DT(E441) DG(F429):DC(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DC(F440):DG(E429) DT(F441):DA(E428) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainA ( 94) ASN656 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) VAL657 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) PRO659 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) LYS777 0 0 0 0 4 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 94) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 95) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 ( 97) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (215) LYS777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 7 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 prot.sequence lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtittKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface/lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtittKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6u8x_D:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3B-DNMT3L IN COMPLEX WITH CPAPG DNA organism=HOMO SAPIENS DNA sequence DC(F423):DG(E446) DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DA(F428):DT(E441) DG(F429):DC(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DC(F440):DG(E429) DT(F441):DA(E428) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainD ( 94) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 95) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 ( 97) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (215) LYS777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 7 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 prot.sequence lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtittKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6u90_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3B(N779A)-DNMT3L IN COMPLEX WITH CPGPT DNA organism=HOMO SAPIENS DNA sequence DC(E423):DG(F446) DA(E424):DT(F445) DT(E425):DA(F444) DG(E426):DC(F443) PYO(E427):DG(F442) DG(E428):DC(F441) DT(E429):DA(F440) DT(E430):DA(F439) DC(E431):DG(F438) DT(E432):DA(F437) DA(E433):DT(F436) DA(E434):DT(F435) DT(E435):DA(F434) DT(E436):DA(F433) DA(E437):DT(F432) DG(E438):DC(F431) DA(E439):DT(F430) DA(E440):DT(F429) DC(E441):DG(F428) DG(E442):PYO(F427) DC(E443):DG(F426) DA(E444):DT(F425) DT(E445):DA(F424) DG(E446):DC(F423) chainA ( 89) CYS651 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 ( 94) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 ( 95) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 2 7 0 0 0 ( 96) ASN658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 97) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 (135) GLU697 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 (136) ASN698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (137) VAL699 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (169) ARG731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (171) ARG733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (215) LYS777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 6 0 0 0 0 0 0 (270) ARG832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVNParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtittKsasikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6u90_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3B(N779A)-DNMT3L IN COMPLEX WITH CPGPT DNA organism=HOMO SAPIENS DNA sequence DC(F423):DG(E446) DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) PYO(F427):DG(E442) DG(F428):DC(E441) DT(F429):DA(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DA(F440):DT(E429) DC(F441):DG(E428) DG(F442):PYO(E427) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainA ( 89) CYS651 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ASN656 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) VAL657 0 0 0 14 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ASN658 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) PRO659 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) GLU697 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) ASN698 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) VAL699 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ARG731 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG733 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) LYS777 0 0 0 0 0 0 6 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) ARG832 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 89) CYS651 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 ( 94) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 ( 95) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 2 3 0 0 0 ( 96) ASN658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 97) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 (135) GLU697 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 (136) ASN698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (137) VAL699 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (169) ARG731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (171) ARG733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (213) THR775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (215) LYS777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 4 4 0 0 0 0 0 0 prot.sequence lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVNParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtittKsasikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface/lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVNParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtKsasikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6u91_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3B(Q772R)-DNMT3L IN COMPLEX WITH CPGPT DNA organism=HOMO SAPIENS DNA sequence DC(E423):DG(F446) DA(E424):DT(F445) DT(E425):DA(F444) DG(E426):DC(F443) DG(E428):DC(F441) DT(E429):DA(F440) DT(E430):DA(F439) DC(E431):DG(F438) DT(E432):DA(F437) DA(E433):DT(F436) DA(E434):DT(F435) DT(E435):DA(F434) DT(E436):DA(F433) DA(E437):DT(F432) DG(E438):DC(F431) DA(E439):DT(F430) DA(E440):DT(F429) DC(E441):DG(F428) DC(E443):DG(F426) DA(E444):DT(F425) DT(E445):DA(F424) DG(E446):DC(F423) chainA ( 94) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 ( 95) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 ( 97) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (213) THR775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (215) LYS777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 5 0 0 0 0 prot.sequence lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvrtiTtKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6u91_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF DNMT3B(Q772R)-DNMT3L IN COMPLEX WITH CPGPT DNA organism=HOMO SAPIENS DNA sequence DC(E423):DG(F446) DA(E424):DT(F445) DT(E425):DA(F444) DG(E426):DC(F443) DG(E428):DC(F441) DT(E429):DA(F440) DT(E430):DA(F439) DC(E431):DG(F438) DT(E432):DA(F437) DA(E433):DT(F436) DA(E434):DT(F435) DT(E435):DA(F434) DT(E436):DA(F433) DA(E437):DT(F432) DG(E438):DC(F431) DA(E439):DT(F430) DA(E440):DT(F429) DC(E441):DG(F428) DC(E443):DG(F426) DA(E444):DT(F425) DT(E445):DA(F424) DG(E446):DC(F423) chainA ( 94) ASN656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 ( 95) VAL657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 ( 97) PRO659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (213) THR775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (215) LYS777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 5 0 0 0 0 chainD ( 94) ASN656 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) VAL657 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) PRO659 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) THR775 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) LYS777 0 0 0 0 0 4 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) SER778 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) ASN779 0 0 0 0 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvrtiTtKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface/lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvrtiTtKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface >6u9q_A:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE ANALYSIS OF DNA-BCL11A ZNF DOMAIN COMPLEX organism=Homo sapiens DNA sequence DC(B1):DG(C12) DA(B2):DT(C11) DT(B3):DA(C10) DT(B4):DA(C9) DG(B5):DC(C8) DG(B6):DC(C7) DT(B7):DA(C6) DC(B8):DG(C5) DA(B9):DT(C4) DA(B10):DT(C3) DG(B11):DC(C2) DC(B12):DG(C1) chainA ( 17) ASN753 0 0 0 0 0 0 0 0 4 6 8 0 ( 19) SER755 0 0 0 0 0 0 0 0 0 2 1 0 ( 20) ASN756 0 0 0 0 0 0 0 8 11 0 0 0 ( 23) VAL759 0 0 0 0 0 0 1 0 0 0 0 0 ( 45) GLN781 0 0 0 0 0 1 12 4 1 0 0 0 ( 46) SER782 0 0 0 0 0 0 0 0 1 0 0 0 ( 47) SER783 0 0 0 0 0 0 0 8 6 0 0 0 ( 48) LYS784 0 0 0 0 7 10 3 0 0 0 0 0 ( 51) ARG787 0 0 0 17 11 2 0 0 0 0 0 0 ( 81) LYS817 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence egrrsdtceycgkvfkNcsNltVhrrshtgerpykcelcnyacaQsSKltRhmkthgqvgkdvykceickmpfsvystlekhmkkwhsd >6ubf_A:Cysteine_proteinases; title=ROLE OF BETA-HAIRPIN MOTIFS IN THE DNA DUPLEX OPENING BY THE RAD4/XPC NUCLEOTIDE EXCISION REPAIR COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(Y2):DA(W24) DT(Y3):DA(W23) DG(Y4):DC(W22) DT(Y5):DA(W21) DA(Y6):DT(W20) DG(Y7):DC(W19) DC(Y8):DG(W18) DG(Y9):DC(W15) DG(Y12):DC(W14) DG(Y13):DC(W13) DA(Y14):DT(W12) DT(Y15):DA(W11) DG(Y16):DC(W10) DT(Y17):DA(W9) DG(Y19):DC(W7) DA(Y20):DT(W6) DG(Y21):DC(W5) DT(Y22):DA(W4) DC(Y23):DG(W3) DA(Y24):DT(W2) chainA ( 12) ARG137 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (344) HIS472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 prot.sequence rtsrncssneeRkrrkyfhmlylvclmvhgfirnewinskrlsrklsnlvpekvfellhpqkdeelplrstrklldglkkcmelwqkhwkitkkydneglymrtwkeiemsannfktlkrsdflravskghgdpdisvqgfvamlracnvnarlimscqppdftnmkidtslngnnaykdmvkypifwcevwdkfskkwitvdpvnlktieqvrlhsklapkgvaccernmlryviaydrkygcrdvtrryaqwmnskvrkrritkddfgekwfrkvitalhhrkrtkiddyedqyffrrdesegipdsvqdlknhpyyvleqdikqtqivkpgckecgylkvHgkvgkvlkvyakrdiadlksarqwymngrilkvikrteeederlysfedtelyipplasasgeitkntfgnievfaptmipgncclvenpvaikaarflgvefapavtspvlsgivvakwlreaietaidgiefi >6ueo_D:TATA-box_binding_protein-like; title=STRUCTURE OF A. THALIANA TBP-AC MISMATCH DNA SITE organism=Arabidopsis thaliana DNA sequence DG(E201):DC(F228) DC(E202):DG(F227) DT(E203):DA(F226) DA(E204):DT(F225) DT(E205):DA(F224) DA(E206):DT(F223) DA(E207):DT(F222) DA(E208):DT(F221) DA(E209):DC(F220) DG(E210):DC(F219) DG(E211):DC(F218) DG(E212):DC(F217) DC(E213):DG(F216) DA(E214):DT(F215) chainD ( 16) ASN27 0 0 0 0 0 8 5 0 0 0 0 0 0 0 ( 18) VAL29 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 46) PHE57 0 0 0 0 0 0 0 0 8 7 0 0 0 0 ( 61) LEU72 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 63) PHE74 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 69) VAL80 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (106) ASN117 0 0 0 0 0 5 6 0 0 0 0 0 0 0 (108) VAL119 0 0 0 0 2 5 0 0 0 0 0 0 0 0 (137) PHE148 0 0 11 22 0 0 0 0 0 0 0 0 0 0 (138) PRO149 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (152) LEU163 0 0 0 3 4 0 0 0 0 0 0 0 0 0 (154) PHE165 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (160) VAL171 0 0 0 2 4 0 0 0 0 0 0 0 0 0 (162) THR173 0 0 0 0 3 8 0 0 0 0 0 0 0 0 prot.sequence vdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >6uep_B:TATA-box_binding_protein-like; title=STRUCTURE OF A. THALIANA TBP BOUND TO A DNA SITE WITH A C-C MISMATCH organism=Arabidopsis thaliana DNA sequence DT(F215):DA(E214) DG(F216):DC(E213) DC(F217):DG(E212) DC(F218):DG(E211) DC(F219):DG(E210) DC(F220):DC(E209) DT(F221):DA(E208) DT(F222):DA(E207) DT(F223):DA(E206) DA(F224):DT(E205) DT(F225):DA(E204) DA(F226):DT(E203) DG(F227):DC(E202) DC(F228):DG(E201) chainB ( 18) ASN27 0 0 0 0 0 0 0 5 8 0 0 0 0 0 ( 20) VAL29 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 48) PHE57 0 0 0 0 5 6 0 0 0 0 0 0 0 0 ( 63) LEU72 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 65) PHE74 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 71) VAL80 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 73) THR82 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (108) ASN117 0 0 0 0 0 0 0 6 5 0 0 0 0 0 (110) VAL119 0 0 0 0 0 0 0 0 5 2 0 0 0 0 (139) PHE148 0 0 0 0 0 0 0 0 0 0 23 13 0 0 (140) PRO149 0 0 0 0 0 0 0 0 0 0 0 5 1 0 (154) LEU163 0 0 0 0 0 0 0 0 0 3 3 0 0 0 (156) PHE165 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (162) VAL171 0 0 0 0 0 0 0 0 0 7 1 0 0 0 (164) THR173 0 0 0 0 0 0 0 0 9 2 0 0 0 0 prot.sequence npvdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrkiqq >6ueq_B:TATA-box_binding_protein-like; title=STRUCTURE OF TBP BOUND TO C-C MISMATCH CONTAINING TATA SITE organism=Arabidopsis thaliana DNA sequence DG(C201):DC(D228) DC(C202):DG(D227) DT(C203):DA(D226) DA(C204):DT(D225) DT(C205):DA(D224) DA(C206):DT(D223) DA(C207):DT(D222) DA(C208):DT(D221) DA(C209):DT(D220) DC(C210):DC(D219) DG(C211):DC(D218) DG(C212):DC(D217) DC(C213):DG(D216) DA(C214):DT(D215) chainB ( 16) ASN27 0 0 0 0 0 9 5 0 0 0 0 0 0 0 ( 18) VAL29 0 0 0 0 0 0 4 2 0 0 0 0 0 0 ( 46) PHE57 0 0 0 0 0 0 0 0 14 11 0 0 0 0 ( 47) ALA58 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 61) LEU72 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 63) PHE74 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 69) VAL80 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (106) ASN117 0 0 0 0 0 5 6 0 0 0 0 0 0 0 (108) VAL119 0 0 0 0 2 6 0 0 0 0 0 0 0 0 (137) PHE148 0 0 8 22 0 0 0 0 0 0 0 0 0 0 (138) PRO149 0 1 5 0 0 0 0 0 0 0 0 0 0 0 (152) LEU163 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (154) PHE165 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (160) VAL171 0 0 0 1 5 0 0 0 0 0 0 0 0 0 (162) THR173 0 0 0 0 2 9 0 0 0 0 0 0 0 0 prot.sequence vdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFAavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >6uer_A:TATA-box_binding_protein-like; title=CRYSTAL FORM 2: STRUCTURE OF TBP BOUND TO C-C MISMATCH AT PH 7 organism=Arabidopsis thaliana DNA sequence DG(C201):DC(D228) DC(C202):DG(D227) DT(C203):DA(D226) DA(C204):DT(D225) DT(C205):DA(D224) DA(C206):DT(D223) DA(C207):DT(D222) DA(C208):DT(D221) DC(C209):DC(D220) DG(C210):DC(D219) DG(C211):DC(D218) DG(C212):DC(D217) DC(C213):DG(D216) DA(C214):DT(D215) chainA ( 16) ASN27 0 0 0 0 0 5 5 0 0 0 0 0 0 0 ( 18) VAL29 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 46) PHE57 0 0 0 0 0 0 0 0 5 4 0 0 0 0 ( 61) LEU72 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 63) PHE74 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 69) VAL80 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 0 3 2 0 0 0 0 0 0 (106) ASN117 0 0 0 0 0 4 7 0 0 0 0 0 0 0 (108) VAL119 0 0 0 0 2 5 0 0 0 0 0 0 0 0 (137) PHE148 0 0 12 25 0 0 0 0 0 0 0 0 0 0 (138) PRO149 0 1 6 0 0 0 0 0 0 0 0 0 0 0 (152) LEU163 0 0 0 3 4 0 0 0 0 0 0 0 0 0 (154) PHE165 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (160) VAL171 0 0 0 1 7 0 0 0 0 0 0 0 0 0 (162) THR173 0 0 0 0 3 7 0 0 0 0 0 0 0 0 prot.sequence vdlskhpsgivptlqNiVstvnldckldlkaialqarnaeynpkrFaavimrirepkttaLiFasgkmVcTgaksedfskmaarkyarivqklgfpakfkdfkiqNiVgscdvkfpirleglayshaafssyepelFPgliyrmkvpkivlLiFvsgkiViTgakmrdetykafeniypvlsefrki >6ueu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF BF DNA POLYMERASE F710Y MUTANT BOUND TO TETRAHYDROFURAN AND DATP organism=Geobacillus stearothermophilus DNA sequence DC(B21):DG(C12) DG(B22):DC(C11) DA(B23):DT(C10) DT(B24):DA(C9) DC(B25):DG(C8) DA(B26):DT(C7) DC(B27):DG(C6) DG(B28):DC(C5) chainA (286) LYS582 0 0 0 0 5 5 0 0 (319) ARG615 0 0 0 0 0 0 0 3 (326) ASN622 0 0 0 0 0 0 1 0 (329) ASN625 0 0 0 0 0 1 7 1 (501) GLN797 0 0 0 0 0 0 0 1 (533) HIS829 0 0 0 0 0 0 0 2 prot.sequence akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6ug1_A:Cysteine_proteinases; title=SEQUENCE IMPACT IN DNA DUPLEX OPENING BY THE RAD4/XPC NUCLEOTIDE EXCISION REPAIR COMPLEX organism=? DNA sequence DG(Y3):DC(W22) DT(Y4):DA(W21) DA(Y5):DT(W20) DG(Y6):DC(W19) DC(Y7):DG(W18) DG(Y8):DC(W17) DC(Y9):DG(W16) DG(Y10):DC(W15) DC(Y11):DG(W14) DG(Y12):DC(W13) DA(Y13):DT(W12) DT(Y14):DA(W11) DG(Y15):DC(W10) DT(Y16):DA(W9) DC(Y17):DC(W7) DG(Y18):DT(W6) DA(Y19):DC(W5) DG(Y20):DA(W4) DT(Y21):DG(W3) DC(Y22):DT(W2) chainA ( 1) ARG129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 prot.sequence Rncssneerkrrkyfhmlylvclmvhgfirnewinskrlsrklsnlvpekvfellhpqkdeelplrstrklldglkkcmelwqkhwkitkkydneglymrtwkeiemsannkrkfktlkrsdflravskghgdpdisvqgfvamlracnvnarlimscqppdftnmkidtslnaykdmvkypifwcevwdkfskkwitvdpvnlktieqvrlhsklapkgvaccernmlryviaydrkygcrdvtrryaqwmnskvrkrritkddfgekwfrkvitalhhrkrtkiddyedqyffrrdesegipdsvqdlknhpyyvleqdikqtqivkpgckecgylkvhgkvgkvlkvyakrdiadlksarqwymngrilkgsrckkviaerlysfedtelyipplasgeitkntfgnievfaptmipgncclvenpvaikaarflgvefapavtsfkkpvlsgivvakwlreaietaidgiefi >6ugm_ABCDEFGH: title=STRUCTURAL BASIS OF COMPASS ECM RECOGNITION OF AN UNMODIFIED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J51):DA(I98) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J70):DC(I79) DA(J71):DC(I78) DC(J72):DT(I77) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DC(J77):DC(I72) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcgihakrvtimpkdiqlarrirger/kVLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aKAktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRKesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcgihakrvtimpkdiqlarrirger/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnyAervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/sRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6ugm_H:Histone-fold; title=STRUCTURAL BASIS OF COMPASS ECM RECOGNITION OF AN UNMODIFIED NUCLEOSOME organism=? DNA sequence DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DC(I72):DC(J77) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DT(I77):DC(J72) DC(I78):DA(J71) DC(I79):DG(J70) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I98):DT(J51) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6uh5_H:Histone-fold; title=STRUCTURAL BASIS OF COMPASS ECM RECOGNITION OF THE H2BUB NUCLEOSOME organism=? DNA sequence DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa >6ui2_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=STRUCTURE OF HUMAN DNA POLYMERASE ETA COMPLEXED WITH N7MG IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE CTP organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 0 (376) LEU378 0 0 0 0 0 2 3 0 (380) ARG382 0 0 19 10 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >6uin_A:Cysteine_proteinases; title=ROLE OF BETA-HAIRPIN MOTIFS IN THE DNA DUPLEX OPENING BY THE RAD4/XPC NUCLEOTIDE EXCISION REPAIR COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(Y2):DA(W24) DT(Y3):DA(W23) DG(Y4):DC(W22) DT(Y5):DA(W21) DA(Y6):DT(W20) DG(Y7):DC(W19) DG(Y12):DC(W18) DG(Y13):DC(W14) DA(Y14):DC(W13) DT(Y15):DT(W12) DG(Y16):DA(W11) DT(Y17):DC(W10) DC(Y18):DA(W9) DG(Y19):DC(W7) DA(Y20):DT(W6) DG(Y21):DC(W5) DT(Y22):DA(W4) DC(Y23):DG(W3) DA(Y24):DT(W2) chainA (451) PHE599 0 0 0 0 0 0 6 32 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ncssneerkrrkyfhmlylvclmvhgfirnewinskrlsrklsnlvpekvfellhpqkdeelplrstrklldglkkcmelwqkhwkitkkydneglymrtwkeiemsannkrkfktlkrsdflravskghgdpdisvqgfvamlracnvnarlimscqppdftnmkidtsaykdmvkypifwcevwdkfskkwitvdpvnlktieqvrlhsklapkgvaccernmlryviaydrkygcrdvtrryaqwmnskvrkrritkddfgekwfrkvitalhhrkrtkiddyedqyffqrdesegipdsvqdlknhpyyvleqdikqtqivkpgckecgylkvhgkvgkvlkvyakrdiadlksarqwymngrilktgsrckkviderlysfedtelyipplasasgeitkntfgnievfaptmipgncclvenpvaikaarflgvefapavtsfkFkpvlsgivvakwlreaietaidgiefi >6uir_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 M184V REVERSE TRANSCRIPTASE-DNA COMPLEX WITH (-)-FTC-TP organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DOC(P822):DG(T706) chainA ( 90) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 (111) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (145) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (171) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 (172) VAL184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (344) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (436) ARG448 1 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (463) GLN475 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipiryqynvlpqgwkgsPaifQssmtkilepfrkqnpdiviyqYvddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagi/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdpaglkkkKsvtvldvgdayfsvpldedfRkytaftipsinnetpgiryqynvlpqgwkgspaIfqsSmtkilepfrkqnpdiviyqyvDdlyvgsdleigqhrtkieelrqhllrwgelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarahtndvkqlteavqkittesIviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6uis_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 M184V REVERSE TRANSCRIPTASE-DNA COMPLEX WITH DCTP organism=? DNA sequence DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) TYR183 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (349) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (441) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 (468) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYvddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >6uis_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 M184V REVERSE TRANSCRIPTASE-DNA COMPLEX WITH DCTP organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (150) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (176) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 (349) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (441) ARG448 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) GLN475 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYvddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdhpaglkkkksvTvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqsSmtkilepfrkqnpdiviyqyvddlyVgsdleigqhrtkieelrqhllrwgelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrhtndvkqlteavqkittesiviWgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >6uit_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 WILD-TYPE REVERSE TRANSCRIPTASE-DNA COMPLEX WITH DCTP organism=? DNA sequence DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) TYR183 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) MET184 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) CYS258 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (346) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (438) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 (465) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipgiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiCklvgklnwasqiypgikvrqlskllralteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsag/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkdstkwrklvdfrelnkrtqdfphpaglkkkksVtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfrkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllryelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsklLrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmhtndvkqlteavqkittesiViwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >6ujx_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 WILD-TYPE REVERSE TRANSCRIPTASE-DNA COMPLEX WITH (-)-FTC-TP organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DOC(P822):DG(T706) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 (115) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (150) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (176) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 (177) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 (251) CYS258 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (441) ARG448 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) GLN475 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsiryqynvlpqgwkgsPaifQssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiCklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsag/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdphpaglkkkksVtvldvgdayfsvpldedfrkYtaftipsinnetpgiryqynvlpqgwkgspaifqSsmtKilepfrkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwgelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskLlrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >6ujy_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 WILD-TYPE REVERSE TRANSCRIPTASE-DNA COMPLEX WITH (-)-3TC-TP organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 (150) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (176) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 (177) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (349) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (441) ARG448 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) GLN475 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagi/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdhpaglkkkksvtVldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssMtkilepfrkqnpdiviyqymddlyvGSdleigqhrtkieelrqhllrwelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmtndvkqlteavqkittesiviwgktPkfklpiqketwetwwteywqatwipewefvntpplvklwyql >6ujz_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 WILD-TYPE REVERSE TRANSCRIPTASE-DNA COMPLEX WITH (+)-FTC-TP organism=? DNA sequence DG(T706):DOC(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) chainA ( 94) ILE94 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) PRO157 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) TYR183 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) MET184 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 (471) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipstpgiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagir/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdphpaglkkkksvTvldvgdayfsvpldedfrkyTaftipsinnetpgiryqynvlpqgwkgspaifqssmtKilepfrkqnpdiviyqymddlyvgsDLeigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyql >6uk0_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 M184V REVERSE TRANSCRIPTASE-DNA COMPLEX organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DOC(P822):DG(T706) chainA ( 80) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 (101) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (137) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (163) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 (164) VAL184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (238) CYS258 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (424) ARG448 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (451) GLN475 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence spietvpvklkpgmdgpkvkqekikalveictemekegkiskigpenpyntpvfaiwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsiiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYvddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiCklvgklnwasqiypgikvrqlskllrgteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagi/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkwrklvdfrelnkrtqdhpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkGspaifqssmtkilepfrkqnpdiviYqyvddlyvgsdleigqhrtkieelrqhlhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsKllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6uke_X: title=HHAI ENDONUCLEASE IN COMPLEX WITH IODINE-LABELLED DNA organism=Haemophilus parahaemolyticus DNA sequence DC(B1):DG(A13) DG(B2):DC(A12) 5IU(B3):DA(A11) DT(B4):DA(A10) DG(B5):DC(A9) DC(B6):DG(A8) DG(B7):DC(A7) DC(B8):DG(A6) DT(B9):DA(A5) 5IU(B10):DA(A4) DG(B11):DC(A3) DG(B12):DC(A2) DA(B13):DT(A1) chainX ( 53) GLN53 0 0 0 21 10 0 0 0 0 0 0 0 0 ( 56) GLN56 0 0 0 0 0 1 7 0 0 0 0 0 0 (155) ARG155 0 0 0 26 11 0 0 0 0 0 0 0 0 (157) LYS157 0 0 0 0 12 10 5 0 0 0 0 0 0 (159) SER159 0 0 0 0 0 0 0 9 5 0 0 0 0 (161) SER161 0 0 0 0 0 0 2 0 0 0 0 0 0 (162) ARG162 0 0 0 0 0 0 0 0 0 0 2 0 0 (225) THR225 0 0 0 0 0 0 0 0 1 0 0 0 0 (231) ILE231 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mnwkefevfcvtylnktygnkfakkgesdsttsdilftgnnpfyieakmphsQcgQfvlipnraeykfdyspknkseinpytqkimqfmsenfseyanlstkgkiiplpesvfvnwikeyyksksvkffitsngdfiifpiehfehyfnvsctyRiKkSgSRhlnskslpdfkqaldkkgisytmrglelhsdenihdkrisgddkdflikenngayhvkilSnTfnanvIfSislknnislfilnedrkafeaaisl >6ukf_X: title=HHAI ENDONUCLEASE IN COMPLEX WITH DNA AT 1 ANGSTROM RESOLUTION organism=Haemophilus parahaemolyticus DNA sequence DT(A1):DA(B13) DC(A2):DG(B12) DC(A3):DG(B11) DA(A4):5IU(B10) DA(A5):DT(B9) DG(A6):DC(B8) DC(A7):DG(B7) DG(A8):DC(B6) DC(A9):DG(B5) DA(A10):DT(B4) DA(A11):5IU(B3) DC(A12):DG(B2) DG(A13):DC(B1) chainX ( 53) GLN53 0 0 0 0 0 0 0 0 11 21 0 0 0 ( 56) GLN56 0 0 0 0 0 0 8 1 0 0 0 0 0 (155) ARG155 0 0 0 0 0 0 0 0 10 25 0 0 0 (157) LYS157 0 0 0 0 0 0 4 10 12 0 0 0 0 (159) SER159 0 0 0 0 5 9 0 0 0 0 0 0 0 (161) SER161 0 0 0 0 0 0 3 0 0 0 0 0 0 (162) ARG162 0 0 2 0 0 0 0 0 0 0 0 0 0 (225) THR225 0 0 0 0 2 0 0 0 0 0 0 0 0 (231) ILE231 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mnwkefevfcvtylnktygnkfakkgesdsttsdilftgnnpfyieakmphsQcgQfvlipnraeykfdyspknkseinpytqkimqfmsenfseyanlstkgkiiplpesvfvnwikeyyksksvkffitsngdfiifpiehfehyfnvsctyRiKkSgSRhlnskslpdfkqaldkkgisytmrglelhsdenihdkrisgddkdflikenngayhvkilSnTfnanvIfSislknnislfilnedrkafeaaisl >6ukg_X: title=HHAI ENDONUCLEASE IN COMPLEX WITH DNA IN SPACE GROUP P21 (PH 4.2) organism=Haemophilus parahaemolyticus DNA sequence DC(A1):DG(B14) DT(A2):DA(B13) DG(A3):DC(B12) DT(A4):DA(B11) DT(A5):DA(B10) DG(A6):DC(B9) DC(A7):DG(B8) DG(A8):DC(B7) DC(A9):DG(B6) DT(A10):DA(B5) DT(A11):DA(B4) DG(A12):DC(B3) DG(A13):DC(B2) chainX ( 28) SER28 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 30) SER30 0 0 0 0 0 4 5 0 0 0 0 0 0 ( 51) HIS51 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 53) GLN53 0 0 0 0 0 0 0 0 9 22 0 0 0 ( 56) GLN56 0 0 0 0 0 0 7 1 0 0 0 0 0 (155) ARG155 0 0 0 0 0 0 0 0 10 28 0 0 0 (157) LYS157 0 0 0 0 0 0 4 11 14 0 0 0 0 (159) SER159 0 0 0 0 8 9 0 0 0 0 0 0 0 (161) SER161 0 0 0 0 0 0 3 0 0 0 0 0 0 (162) ARG162 0 0 6 2 0 0 0 0 0 0 0 0 0 (223) SER223 0 0 0 0 2 0 0 0 0 0 0 0 0 (225) THR225 0 0 0 0 3 0 0 0 0 0 0 0 0 (231) ILE231 0 0 0 0 0 0 0 0 1 0 0 0 0 (233) SER233 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mnwkefevfcvtylnktygnkfakkgeSdSttsdilftgnnpfyieakmpHsQcgQfvlipnraeykfdyspknKseinpytqkimqfmsenfseyanlstkgkiiplpesvfvnwikeyyksksvkffitsngdfiifpiehfehyfnvsctyRiKkSgSRhlnskslpdfkqaldkkgisytmrglelhsdenihdkrisgddkdflikenngayhvkilSnTfnanvIfSislknnislfilnedrkafeaaisl >6ukh_X: title=HHAI ENDONUCLEASE IN COMPLEX WITH DNA IN SPACE GROUP P41212 (PH 6.0) organism=Haemophilus parahaemolyticus DNA sequence DC(A1):DG(B14) DT(A2):DA(B13) DG(A3):DC(B12) DT(A4):DA(B11) DT(A5):DA(B10) DG(A6):DC(B9) DC(A7):DG(B8) DG(A8):DC(B7) DC(A9):DG(B6) DT(A10):DA(B5) DT(A11):DA(B4) DG(A12):DC(B3) DG(A13):DC(B2) chainX ( 28) SER28 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 30) SER30 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 53) GLN53 0 0 0 0 0 0 0 0 9 21 0 0 0 ( 56) GLN56 0 0 0 0 0 0 6 1 0 0 0 0 0 (155) ARG155 0 0 0 0 0 0 0 0 11 34 0 0 0 (157) LYS157 0 0 0 0 0 0 4 9 13 0 0 0 0 (159) SER159 0 0 0 0 6 8 0 0 0 0 0 0 0 (161) SER161 0 0 0 0 0 0 3 0 0 0 0 0 0 (162) ARG162 0 0 3 2 0 0 0 0 0 0 0 0 0 (223) SER223 0 0 0 0 2 0 0 0 0 0 0 0 0 (225) THR225 0 0 0 0 2 0 0 0 0 0 0 0 0 (231) ILE231 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mnwkefevfcvtylnktygnkfakkgeSdSttsdilftgnnpfyieakmphsQcgQfvlipnraeykfdyspknkseinpytqkimqfmsenfseyanlstkgkiiplpesvfvnwikeyyksksvkffitsngdfiifpiehfehyfnvsctyRiKkSgSRhlnskslpdfkqaldkkgisytmrglelhsdenihdkrisgddkdflikenngayhvkilSnTfnanvIfsislknnislfilnedrkafeaaisl >6uki_Y: title=HHAI ENDONUCLEASE IN COMPLEX WITH DNA IN SPACE GROUP P212121 (PH 6.0) organism=Haemophilus parahaemolyticus DNA sequence DC(D1):DG(E14) DT(D2):DA(E13) DG(D3):DC(E12) DT(D4):DA(E11) DT(D5):DA(E10) DG(D6):DC(E9) DC(D7):DG(E8) DG(D8):DC(E7) DC(D9):DG(E6) DT(D10):DA(E5) DT(D11):DA(E4) DG(D12):DC(E3) DG(D13):DC(E2) DA(D14):DT(E1) chainY ( 28) SER28 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 30) SER30 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 51) HIS51 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 53) GLN53 0 0 0 0 0 0 0 0 9 22 0 0 0 0 ( 56) GLN56 0 0 0 0 0 0 6 1 0 0 0 0 0 0 (155) ARG155 0 0 0 0 0 0 0 0 10 30 0 0 0 0 (157) LYS157 0 0 0 0 0 0 4 9 15 0 0 0 0 0 (159) SER159 0 0 0 0 7 10 0 0 0 0 0 0 0 0 (161) SER161 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (162) ARG162 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (223) SER223 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (225) THR225 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (231) ILE231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (233) SER233 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence mnwkefevfcvtylnktygnkfakkgeSdSttsdilftgnnpfyieakmpHsQcgQfvlipnraeykfdyspknkseinpytqkimqfmsenfseyanlstkgkiiplpesvfvnwikeyyksksvkffitsngdfiifpiehfehyfnvsctyRiKkSgSRhlnskslpdfkqaldkkgisytmrglelhsdenihdkrisgddkdflikenngayhvkilSnTfnanvIfSislknnislfilnedrkafeaaisl >6uok_F:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=Y271G DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH TEMPLATING CYTOSINE AND INCOMING R8-OXO-GTP organism=HOMO SAPIENS DNA sequence DG(E1):DC(B5) DT(E2):DA(B4) DC(E3):DG(B3) DG(E4):DC(B2) DG(E5):DC(B1) chainF ( 25) HIS34 37 0 0 0 0 ( 26) LYS35 7 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlgftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6uol_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=Y271G DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH A TEMPLATING CYTOSINE AND INCOMING RGTP organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 38 0 0 0 0 ( 26) LYS35 5 0 0 0 0 ( 29) ALA38 5 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlgftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6uom_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=Y271G DNA POLYMERASE BETA TERNARY COMPLEX WITH TEMPLATING ADENINE AND INCOMING R8-OXO-GTP organism=HOMO SAPIENS DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 33 ( 26) LYS35 0 0 0 0 5 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlgftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >6uph_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF A YEAST CENTROMERIC NUCLEOSOME AT 2.7 ANGSTROM RESOLUTION organism=? DNA sequence DT(I-59):DA(J59) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) chainA ( 21) ILE156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 5) ARG38 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 45) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 1) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 prot.sequence elalyeirkyqrstdlliskIpfarlvkevtdefttkdqdlrwqsmaimalqeaseaylvgllehtnllalhakritimkkdmqlarrirgqf/dniqgitkpairrlarrggvkRisgliyeevrnvlktflesvirdavtytehakrktvtsldvvyalkrqgrtlygfgg/srsakagltfpvgrvhrllrkGnyaqrigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnih/rtkaRketyssyiykvlkqthpdtgisqksmsilnsfvndiferiatessklaaynkkstisareiqtavrlilpgelakhavsegtravtkysss/tpselalyeirkyqrstdlliskipfarlvkevtdefttkdqdlRwqsmaimalqeaseaylvgllehtnllalhakritimkkdmqlarrirgqfi/dniqgitkpairrlarrggvkrisgliyeevrnvlktflesvirDavtytehakrktvtsldvvyalkrqgrtlygfgg/qsrsakagltfpvgrvhrllrkgnyaqrigsgapvyltavleylAaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihq/Rketyssyiykvlkqthpdtgisqksmsilnsfvndiferiatessklaaynkkstisareiqtavrlilpgelakhavsegtravtkysss >6upk_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF FACT_SUBNUCLEOSOME COMPLEX 1 organism=HOMO SAPIENS DNA sequence DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) chainA ( 25) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 32) ARG42 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 24 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH (195) ARG211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/rakaksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsrkesysvyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/vsyknpslmpkephiremkiyiDkkyetvimpvfgiatpfhiatiknismsvegdytylrinfycpgsalgrgnifpnpeatfvkeityrasnilnlqnafriikevqkrykxxxxxxvkqdslvinlnrsnpklkdlyirpniaqkrmqgsleahvngfrftsvrgdkvdilynnikhalfqpcdgemiivlhfhlknaimfgkkrhtdvqfytevgeittdddlyaeqmeremrhklktafknfiekvealtkeelefevpfrdlgfngapyrstcllqptssalvnatewppfvvtldevelihfervqfhlknfdmvivykdyskkvtminaipvasldpikewlnscdlkytegvqslnwtkimktivddpegffeqggwsflxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx/maetlefndvyqevkgsmndgrlrlsrqgiifknsktgkvdniqageltegiwrrhglklltknghvykydgfresefeklsdffkthyrlelmekdlcvkgwnwgtvkfggqllsfdigdqpvfeiplsnvsqcttgknevtlefhqnddaevslmevrfyvpptqxxxxxxxxxxxxxdaicifrelqcltpRgrydiriyptflhlhgktfdykipyttvlrlfllphkdqrqmffvisldppikqgqtryhflillfskdedisltlnmneeevekrfegrltknmsgslyemvsrvmkalvnrkitvpgnfqghsgaqcitcsykassgllyplergfiyvhkppvhirfdeisfvnfargttttrsfdfeietkqgtqytfssiereeygklfdfvnakklnikn >6upk_H:PH_domain-like; title=STRUCTURE OF FACT_SUBNUCLEOSOME COMPLEX 1 organism=HOMO SAPIENS DNA sequence DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) chainH (195) ARG211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence maetlefndvyqevkgsmndgrlrlsrqgiifknsktgkvdniqageltegiwrrhglklltknghvykydgfresefeklsdffkthyrlelmekdlcvkgwnwgtvkfggqllsfdigdqpvfeiplsnvsqcttgknevtlefhqnddaevslmevrfyvpptqxxxxxxxxxxxxxdaicifrelqcltpRgrydiriyptflhlhgktfdykipyttvlrlfllphkdqrqmffvisldppikqgqtryhflillfskdedisltlnmneeevekrfegrltknmsgslyemvsrvmkalvnrkitvpgnfqghsgaqcitcsykassgllyplergfiyvhkppvhirfdeisfvnfargttttrsfdfeietkqgtqytfssiereeygklfdfvnakklnikn >6upx_AE: title=RNA POLYMERASE II ELONGATION COMPLEX WITH 5-GUANIDINOHYDANTOIN LESION IN STATE 1 organism=? DNA sequence DT(T3):DA(N16) DT(T4):DA(N15) DC(T5):DG(N14) DT(T6):DA(N13) DC(T7):DG(N12) DT(T8):DA(N11) DC(T9):DG(N10) DT(T10):DA(N9) DC(T11):DG(N8) DT(T12):DA(N7) DC(T13):DG(N6) DG(T14):DC(N5) DC(T15):DG(N4) DT(T16):DA(N3) DG(T17):DC(N2) chainA (1325) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvplvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/qenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >6upy_AE: title=RNA POLYMERASE II ELONGATION COMPLEX WITH 5-GUANIDINOHYDANTOIN LESION IN STATE 2E organism=? DNA sequence DT(T4):DA(N15) DC(T5):DG(N14) DT(T6):DA(N13) DC(T7):DG(N12) DT(T8):DA(N11) DC(T9):DG(N10) DT(T10):DA(N9) DC(T11):DG(N8) DT(T12):DA(N7) DC(T13):DG(N6) DG(T14):DC(N5) DC(T15):DG(N4) DT(T16):DA(N3) DG(T17):DC(N2) chainA (1324) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvplvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqagrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/qenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >6upz_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX WITH 5-GUANIDINOHYDANTOIN LESION IN STATE 3 organism=? DNA sequence DC(N2):DG(T17) DA(N3):DT(T16) DG(N4):DC(T15) DC(N5):DG(T14) DG(N6):DC(T13) DA(N7):DT(T12) DG(N8):DC(T11) DA(N9):DT(T10) DG(N10):DC(T9) DA(N11):DT(T8) DG(N12):DC(T7) DA(N13):DT(T6) DG(N14):DC(T5) chainA (1322) ARG1386 5 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvprggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid >6upz_AE: title=RNA POLYMERASE II ELONGATION COMPLEX WITH 5-GUANIDINOHYDANTOIN LESION IN STATE 3 organism=? DNA sequence DC(N2):DG(T17) DA(N3):DT(T16) DG(N4):DC(T15) DC(N5):DG(T14) DG(N6):DC(T13) DA(N7):DT(T12) DG(N8):DC(T11) DA(N9):DT(T10) DG(N10):DC(T9) DA(N11):DT(T8) DG(N12):DC(T7) DA(N13):DT(T6) DG(N14):DC(T5) chainA (1322) ARG1386 5 1 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvprggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/enernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >6uq0_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX WITH 5-GUANIDINOHYDANTOIN LESION IN STATE 4 organism=? DNA sequence DT(T4):DA(N15) DC(T5):DG(N14) DT(T6):DA(N13) DC(T7):DG(N12) DT(T8):DA(N11) DC(T9):DG(N10) DT(T10):DA(N9) DC(T11):DG(N8) DC(T13):DG(N6) DG(T14):DC(N5) DC(T15):DG(N4) DT(T16):DA(N3) chainA (141) LYS143 0 0 0 0 0 0 2 0 0 0 0 0 (1325) ARG1386 0 0 0 0 0 0 0 0 0 0 3 10 chainB chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvplvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlarkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyesgkvfigrlpimlrskncylseatesdlyklKecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddghkelkvrkghiaklmateyqdeeytwssllneglveyidaeeeesiliamqpedlepaeldvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpiayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrs/qenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvNithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >6uq1_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX WITH 5-GUANIDINOHYDANTOIN LESION IN STATE 6 organism=? DNA sequence DA(N3):DT(T16) DG(N4):DC(T15) DC(N5):DG(T14) DG(N6):DC(T13) DA(N7):DT(T12) DG(N8):DC(T11) DA(N9):DT(T10) DG(N10):DC(T9) DA(N11):DT(T8) DG(N12):DC(T7) DA(N13):DT(T6) DG(N14):DC(T5) DA(N15):DT(T4) chainA (1322) ARG1386 9 3 0 0 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvprggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlarkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddghkelkvrkghiaklmateyqdveeytwssllneglveyidaeeeesiliamqpedlepaeldvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrs/qenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >6uq2_AE: title=RNA POLYMERASE II ELONGATION COMPLEX WITH DG IN STATE 1 organism=? DNA sequence DC(N2):DG(T17) DA(N3):DT(T16) DG(N4):DC(T15) DC(N5):DG(T14) DG(N6):DC(T13) DA(N7):DT(T12) DG(N8):DC(T11) DA(N9):DT(T10) DG(N10):DC(T9) DA(N11):DT(T8) DG(N12):DC(T7) DA(N13):DT(T6) DG(N14):DC(T5) chainA (1324) ARG1386 0 4 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvplvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/enernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >6uq3_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX WITH 5-GUANIDINOHYDANTOIN LESION IN STATE 5 organism=? DNA sequence DC(T2):DG(N17) DT(T3):DA(N16) DT(T4):DA(N15) DC(T5):DG(N14) DT(T6):DA(N13) DC(T7):DG(N12) DT(T8):DA(N11) DC(T9):DG(N10) DT(T10):DA(N9) DC(T11):DG(N8) DT(T12):DA(N7) DC(T13):DG(N6) DG(T14):DC(N5) DC(T15):DG(N4) DT(T16):DA(N3) DG(T17):DC(N2) chainA (1325) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 chainB chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvplvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlarkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddghkelkvrkghiaklmateyqdveeytwssllneglveyidaeeeesiliamqpedlepaeldvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrs/qenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >6uqi_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF Q38A HUMAN DNA POLYMERASE ETA BOUND WITH 8- OXOADENINE (OXOA) AND NON-HYDROLYZABLE DGTP ANALOG (DGTP*) organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 64) ARG61 9 0 0 0 0 0 0 0 (320) SER322 0 3 0 0 0 0 0 0 (376) LEU378 0 5 2 0 0 0 0 0 (380) ARG382 0 0 0 0 8 16 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvaykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >6ur4_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA POLYMERASE I LARGE FRAGMENT FROM BACILLUS STEAROTHERMOPHILUS WITH DNA TEMPLATE AND 3'-AMINO PRIMER organism=Geobacillus stearothermophilus DNA sequence DC(C6):DG(B12) DT(C7):DA(B11) DG(C8):DC(B10) DA(C9):DT(B9) DT(C10):DA(B8) DC(C11):DG(B7) DG(C12):DC(B6) DC(C13):DG(B5) chainA (285) LYS582 0 0 5 3 0 0 0 0 (290) TYR587 0 1 0 0 0 0 0 0 (318) ARG615 3 0 0 0 0 0 0 0 (328) ASN625 1 6 3 0 0 0 0 0 (500) GLN797 1 0 0 0 0 0 0 0 (532) HIS829 1 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6ur9_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA POLYMERASE I LARGE FRAGMENT FROM BACILLUS STEAROTHERMOPHILUS WITH DNA TEMPLATE, DIDEOXY PRIMER, 3'-AMINO-DDGTP (NGTP), AND CA2+ organism=Geobacillus stearothermophilus DNA sequence DG(b1):DC(c12) DC(b2):DG(c11) DG(b3):DC(c10) DA(b4):DT(c9) DT(b5):DA(c8) DC(b6):DG(c7) DA(b7):DT(c6) DG(b8):DC(c5) DC(b9):DG(c4) DA(b10):DC(c3) DC(b11):DA(c2) DG(b12):DC(c1) chainA (285) LYS582 0 0 0 0 3 5 0 0 0 0 0 0 (290) TYR587 0 0 0 0 0 0 1 0 0 0 0 0 (318) ARG615 0 0 0 0 0 0 0 5 3 0 0 0 (328) ASN625 0 0 0 0 0 3 6 1 0 0 0 0 (410) ALA707 0 0 0 0 0 0 0 0 0 1 0 0 (417) TYR714 0 0 0 0 0 0 0 0 0 4 0 0 (419) ILE716 0 0 0 0 0 0 0 0 0 2 0 0 (420) SER717 0 0 0 0 0 0 0 0 0 0 2 0 (422) TYR719 0 0 0 0 0 0 0 0 0 0 39 0 (432) ARG729 0 0 0 0 0 0 0 0 0 0 1 0 (500) GLN797 0 0 0 0 0 0 0 1 4 0 0 0 (532) HIS829 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnygivYgISdYglaqnlnisRkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6ur9_AD:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA POLYMERASE I LARGE FRAGMENT FROM BACILLUS STEAROTHERMOPHILUS WITH DNA TEMPLATE, DIDEOXY PRIMER, 3'-AMINO-DDGTP (NGTP), AND CA2+ organism=Geobacillus stearothermophilus DNA sequence DG(b1):DC(c12) DC(b2):DG(c11) DG(b3):DC(c10) DA(b4):DT(c9) DT(b5):DA(c8) DC(b6):DG(c7) DA(b7):DT(c6) DG(b8):DC(c5) DC(b9):DG(c4) DA(b10):DC(c3) DC(b11):DA(c2) DG(b12):DC(c1) chainA (285) LYS582 0 0 0 0 3 5 0 0 0 0 0 0 (290) TYR587 0 0 0 0 0 0 1 0 0 0 0 0 (318) ARG615 0 0 0 0 0 0 0 5 3 0 0 0 (328) ASN625 0 0 0 0 0 3 6 1 0 0 0 0 (410) ALA707 0 0 0 0 0 0 0 0 0 1 0 0 (417) TYR714 0 0 0 0 0 0 0 0 0 4 0 0 (419) ILE716 0 0 0 0 0 0 0 0 0 2 0 0 (420) SER717 0 0 0 0 0 0 0 0 0 0 2 0 (422) TYR719 0 0 0 0 0 0 0 0 0 0 39 0 (432) ARG729 0 0 0 0 0 0 0 0 0 0 1 0 (500) GLN797 0 0 0 0 0 0 0 1 4 0 0 0 (532) HIS829 0 0 0 0 0 0 0 2 0 0 0 0 chainD (318) ARG615 0 0 0 0 0 0 0 0 0 0 0 3 (417) TYR714 0 0 0 0 0 0 0 0 0 0 5 51 (419) ILE716 0 0 0 0 0 0 0 0 0 0 10 0 (422) TYR719 0 0 0 0 0 0 0 0 0 46 0 0 (427) ASN724 0 0 0 0 0 0 0 0 0 0 3 0 (432) ARG729 0 0 0 0 0 0 0 0 0 5 0 0 (484) PHE781 0 0 0 0 0 0 0 0 2 0 0 0 (485) ASN782 0 0 0 0 0 0 0 0 2 0 0 0 (500) GLN797 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnygivYgISdYglaqnlnisRkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivYgIsdYglaqNlnisRkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnFNvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6us5_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA POLYMERASE I LARGE FRAGMENT FROM BACILLUS STEAROTHERMOPHILUS WITH DNA TEMPLATE, 3'-AMINO PRIMER, DGPNHPP ANALOG, AND MN2+ organism=Geobacillus stearothermophilus DNA sequence DC(c1):DG(b12) DA(c2):DC(b11) DC(c3):DA(b10) DG(c4):DC(b9) DC(c5):DG(b8) DT(c6):DA(b7) DG(c7):DC(b6) DA(c8):DT(b5) DT(c9):DA(b4) DC(c10):DG(b3) DG(c11):DC(b2) DC(c12):DG(b1) chainA (285) LYS582 0 0 0 0 0 0 5 3 0 0 0 0 (318) ARG615 0 0 0 3 3 0 0 0 0 0 0 0 (328) ASN625 0 0 0 0 1 6 2 0 0 0 0 0 (410) ALA707 0 0 1 0 0 0 0 0 0 0 0 0 (413) TYR710 0 0 2 0 0 0 0 0 0 0 0 0 (417) TYR714 0 0 4 0 0 0 0 0 0 0 0 0 (419) ILE716 0 0 3 0 0 0 0 0 0 0 0 0 (420) SER717 0 3 0 0 0 0 0 0 0 0 0 0 (422) TYR719 0 8 0 0 0 0 0 0 0 0 0 0 (432) ARG729 0 1 0 0 0 0 0 0 0 0 0 0 (484) PHE781 0 2 0 0 0 0 0 0 0 0 0 0 (496) ASN793 0 0 0 1 0 0 0 0 0 0 0 0 (500) GLN797 0 0 0 5 0 0 0 0 0 0 0 0 (532) HIS829 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnYgivYgISdYglaqnlnisRkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnFnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6us5_AD:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA POLYMERASE I LARGE FRAGMENT FROM BACILLUS STEAROTHERMOPHILUS WITH DNA TEMPLATE, 3'-AMINO PRIMER, DGPNHPP ANALOG, AND MN2+ organism=Geobacillus stearothermophilus DNA sequence DC(c1):DG(b12) DA(c2):DC(b11) DC(c3):DA(b10) DG(c4):DC(b9) DC(c5):DG(b8) DT(c6):DA(b7) DG(c7):DC(b6) DA(c8):DT(b5) DT(c9):DA(b4) DC(c10):DG(b3) DG(c11):DC(b2) DC(c12):DG(b1) chainA (285) LYS582 0 0 0 0 0 0 5 3 0 0 0 0 (318) ARG615 0 0 0 3 3 0 0 0 0 0 0 0 (328) ASN625 0 0 0 0 1 6 2 0 0 0 0 0 (410) ALA707 0 0 1 0 0 0 0 0 0 0 0 0 (413) TYR710 0 0 2 0 0 0 0 0 0 0 0 0 (417) TYR714 0 0 4 0 0 0 0 0 0 0 0 0 (419) ILE716 0 0 3 0 0 0 0 0 0 0 0 0 (420) SER717 0 3 0 0 0 0 0 0 0 0 0 0 (422) TYR719 0 8 0 0 0 0 0 0 0 0 0 0 (432) ARG729 0 1 0 0 0 0 0 0 0 0 0 0 (484) PHE781 0 2 0 0 0 0 0 0 0 0 0 0 (496) ASN793 0 0 0 1 0 0 0 0 0 0 0 0 (500) GLN797 0 0 0 5 0 0 0 0 0 0 0 0 (532) HIS829 0 0 0 0 1 0 0 0 0 0 0 0 chainD (318) ARG615 4 0 0 0 0 0 0 0 0 0 0 0 (410) ALA707 0 1 0 0 0 0 0 0 0 0 0 0 (417) TYR714 0 4 0 0 0 0 0 0 0 0 0 0 (419) ILE716 0 3 0 0 0 0 0 0 0 0 0 0 (422) TYR719 0 0 26 0 0 0 0 0 0 0 0 0 (432) ARG729 0 0 7 0 0 0 0 0 0 0 0 0 (496) ASN793 1 0 0 0 0 0 0 0 0 0 0 0 (500) GLN797 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnYgivYgISdYglaqnlnisRkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnFnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepnlqnipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnygivYgIsdYglaqnlnisRkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >6usj_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF TWO NUCLEOSOMES BRIDGED BY HUMAN PARP2 organism=HOMO SAPIENS DNA sequence DG(J-78):DC(I78) DC(J-77):DG(I77) DC(J-76):DG(I76) DA(J-75):DT(I75) DG(J-74):DC(I74) DG(J-73):DC(I73) DC(J-72):DG(I72) DC(J-71):DG(I71) DT(J-70):DA(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DG(J-67):DC(I67) DA(J-66):DT(I66) DA(J-65):DT(I65) DT(J-64):DA(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DA(J71):DT(I-71) DG(J72):DC(I-72) DG(J73):DC(I-73) DC(J74):DG(I-74) DC(J75):DG(I-75) DT(J76):DA(I-76) DT(J77):DA(I-77) DG(J78):DC(I-78) DT(J79):DA(I-79) DG(J80):DC(I-80) DG(J81):DC(I-81) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 4) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/SrkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/kkpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >6usj_E:Histone-fold; title=STRUCTURE OF TWO NUCLEOSOMES BRIDGED BY HUMAN PARP2 organism=HOMO SAPIENS DNA sequence DG(J-78):DC(I78) DC(J-77):DG(I77) DC(J-76):DG(I76) DA(J-75):DT(I75) DG(J-74):DC(I74) DG(J-73):DC(I73) DC(J-72):DG(I72) DC(J-71):DG(I71) DT(J-70):DA(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DG(J-67):DC(I67) DA(J-66):DT(I66) DA(J-65):DT(I65) DT(J-64):DA(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DA(J71):DT(I-71) DG(J72):DC(I-72) DG(J73):DC(I-73) DC(J74):DG(I-74) DC(J75):DG(I-75) DT(J76):DA(I-76) DT(J77):DA(I-77) DG(J78):DC(I-78) DT(J79):DA(I-79) DG(J80):DC(I-80) DG(J81):DC(I-81) chainE ( 4) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger >6usj_KLMNOPQR:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF TWO NUCLEOSOMES BRIDGED BY HUMAN PARP2 organism=HOMO SAPIENS DNA sequence DA(T-81):DT(S81) DT(T-80):DA(S80) DC(T-79):DG(S79) DG(T-78):DC(S78) DC(T-77):DG(S77) DC(T-76):DG(S76) DA(T-75):DT(S75) DG(T-74):DC(S74) DG(T-73):DC(S73) DC(T-72):DG(S72) DC(T-71):DG(S71) DT(T-70):DA(S70) DG(T-69):DC(S69) DA(T-68):DT(S68) DG(T-67):DC(S67) DA(T-66):DT(S66) DA(T-65):DT(S65) DT(T-64):DA(S64) DC(T-63):DG(S63) DC(T-62):DG(S62) DG(T-61):DC(S61) DG(T-60):DC(S60) DT(T-59):DA(S59) DG(T-58):DC(S58) DC(T-57):DG(S57) DC(T-56):DG(S56) DG(T-55):DC(S55) DA(T-54):DT(S54) DG(T-53):DC(S53) DG(T-52):DC(S52) DC(T-51):DG(S51) DC(T-50):DG(S50) DG(T-49):DC(S49) DC(T-48):DG(S48) DT(T-47):DA(S47) DC(T-46):DG(S46) DA(T-45):DT(S45) DA(T-44):DT(S44) DT(T-43):DA(S43) DT(T-42):DA(S42) DG(T-41):DC(S41) DG(T-40):DC(S40) DT(T-39):DA(S39) DC(T-38):DG(S38) DG(T-37):DC(S37) DT(T-36):DA(S36) DA(T-35):DT(S35) DG(T-34):DC(S34) DA(T-33):DT(S33) DC(T-32):DG(S32) DA(T-31):DT(S31) DG(T-30):DC(S30) DC(T-29):DG(S29) DT(T-28):DA(S28) DC(T-27):DG(S27) DT(T-26):DA(S26) DA(T-25):DT(S25) DG(T-24):DC(S24) DC(T-23):DG(S23) DA(T-22):DT(S22) DC(T-21):DG(S21) DC(T-20):DG(S20) DG(T-19):DC(S19) DC(T-18):DG(S18) DT(T-17):DA(S17) DT(T-16):DA(S16) DA(T-15):DT(S15) DA(T-14):DT(S14) DA(T-13):DT(S13) DC(T-12):DG(S12) DG(T-11):DC(S11) DC(T-10):DG(S10) DA(T-9):DT(S9) DC(T-8):DG(S8) DG(T-7):DC(S7) DT(T-6):DA(S6) DA(T-5):DT(S5) DC(T-4):DG(S4) DG(T-3):DC(S3) DC(T-2):DG(S2) DG(T-1):DC(S1) DC(T0):DG(S0) DT(T1):DA(S-1) DG(T2):DC(S-2) DT(T3):DA(S-3) DC(T4):DG(S-4) DC(T5):DG(S-5) DC(T6):DG(S-6) DC(T7):DG(S-7) DC(T8):DG(S-8) DG(T9):DC(S-9) DC(T10):DG(S-10) DG(T11):DC(S-11) DT(T12):DA(S-12) DT(T13):DA(S-13) DT(T14):DA(S-14) DT(T15):DA(S-15) DA(T16):DT(S-16) DA(T17):DT(S-17) DC(T18):DG(S-18) DC(T19):DG(S-19) DG(T20):DC(S-20) DC(T21):DG(S-21) DC(T22):DG(S-22) DA(T23):DT(S-23) DA(T24):DT(S-24) DG(T25):DC(S-25) DG(T26):DC(S-26) DG(T27):DC(S-27) DG(T28):DC(S-28) DA(T29):DT(S-29) DT(T30):DA(S-30) DT(T31):DA(S-31) DA(T32):DT(S-32) DC(T33):DG(S-33) DT(T34):DA(S-34) DC(T35):DG(S-35) DC(T36):DG(S-36) DC(T37):DG(S-37) DT(T38):DA(S-38) DA(T39):DT(S-39) DG(T40):DC(S-40) DT(T41):DA(S-41) DC(T42):DG(S-42) DT(T43):DA(S-43) DC(T44):DG(S-44) DC(T45):DG(S-45) DA(T46):DT(S-46) DG(T47):DC(S-47) DG(T48):DC(S-48) DC(T49):DG(S-49) DA(T50):DT(S-50) DC(T51):DG(S-51) DG(T52):DC(S-52) DT(T53):DA(S-53) DG(T54):DC(S-54) DT(T55):DA(S-55) DC(T56):DG(S-56) DA(T57):DT(S-57) DG(T58):DC(S-58) DA(T59):DT(S-59) DT(T60):DA(S-60) DA(T61):DT(S-61) DT(T62):DA(S-62) DA(T63):DT(S-63) DT(T64):DA(S-64) DA(T65):DT(S-65) DC(T66):DG(S-66) DA(T67):DT(S-67) DT(T68):DA(S-68) DC(T69):DG(S-69) DC(T70):DG(S-70) DA(T71):DT(S-71) DG(T72):DC(S-72) DG(T73):DC(S-73) DC(T74):DG(S-74) DC(T75):DG(S-75) DT(T76):DA(S-76) DT(T77):DA(S-77) chainK ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainO ( 4) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/SrkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/kkpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >6usj_UV:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF TWO NUCLEOSOMES BRIDGED BY HUMAN PARP2 organism=HOMO SAPIENS DNA sequence DG(J-78):DC(I78) DC(J-77):DG(I77) DC(J-76):DG(I76) DA(J-75):DT(I75) DG(J-74):DC(I74) DG(J-73):DC(I73) DC(J-72):DG(I72) DC(J-71):DG(I71) DT(J-70):DA(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DG(J-67):DC(I67) DA(J-66):DT(I66) DA(J-65):DT(I65) DT(J-64):DA(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DA(J71):DT(I-71) DG(J72):DC(I-72) DG(J73):DC(I-73) DC(J74):DG(I-74) DC(J75):DG(I-75) DT(J76):DA(I-76) DT(J77):DA(I-77) DG(J78):DC(I-78) DT(J79):DA(I-79) DG(J80):DC(I-80) DG(J81):DC(I-81) DA(T-81):DT(S81) DT(T-80):DA(S80) DC(T-79):DG(S79) DG(T-78):DC(S78) DC(T-77):DG(S77) DC(T-76):DG(S76) DA(T-75):DT(S75) DG(T-74):DC(S74) DG(T-73):DC(S73) DC(T-72):DG(S72) DC(T-71):DG(S71) DT(T-70):DA(S70) DG(T-69):DC(S69) DA(T-68):DT(S68) DG(T-67):DC(S67) DA(T-66):DT(S66) DA(T-65):DT(S65) DT(T-64):DA(S64) DC(T-63):DG(S63) DC(T-62):DG(S62) DG(T-61):DC(S61) DG(T-60):DC(S60) DT(T-59):DA(S59) DG(T-58):DC(S58) DC(T-57):DG(S57) DC(T-56):DG(S56) DG(T-55):DC(S55) DA(T-54):DT(S54) DG(T-53):DC(S53) DG(T-52):DC(S52) DC(T-51):DG(S51) DC(T-50):DG(S50) DG(T-49):DC(S49) DC(T-48):DG(S48) DT(T-47):DA(S47) DC(T-46):DG(S46) DA(T-45):DT(S45) DA(T-44):DT(S44) DT(T-43):DA(S43) DT(T-42):DA(S42) DG(T-41):DC(S41) DG(T-40):DC(S40) DT(T-39):DA(S39) DC(T-38):DG(S38) DG(T-37):DC(S37) DT(T-36):DA(S36) DA(T-35):DT(S35) DG(T-34):DC(S34) DA(T-33):DT(S33) DC(T-32):DG(S32) DA(T-31):DT(S31) DG(T-30):DC(S30) DC(T-29):DG(S29) DT(T-28):DA(S28) DC(T-27):DG(S27) DT(T-26):DA(S26) DA(T-25):DT(S25) DG(T-24):DC(S24) DC(T-23):DG(S23) DA(T-22):DT(S22) DC(T-21):DG(S21) DC(T-20):DG(S20) DG(T-19):DC(S19) DC(T-18):DG(S18) DT(T-17):DA(S17) DT(T-16):DA(S16) DA(T-15):DT(S15) DA(T-14):DT(S14) DA(T-13):DT(S13) DC(T-12):DG(S12) DG(T-11):DC(S11) DC(T-10):DG(S10) DA(T-9):DT(S9) DC(T-8):DG(S8) DG(T-7):DC(S7) DT(T-6):DA(S6) DA(T-5):DT(S5) DC(T-4):DG(S4) DG(T-3):DC(S3) DC(T-2):DG(S2) DG(T-1):DC(S1) DC(T0):DG(S0) DT(T1):DA(S-1) DG(T2):DC(S-2) DT(T3):DA(S-3) DC(T4):DG(S-4) DC(T5):DG(S-5) DC(T6):DG(S-6) DC(T7):DG(S-7) DC(T8):DG(S-8) DG(T9):DC(S-9) DC(T10):DG(S-10) DG(T11):DC(S-11) DT(T12):DA(S-12) DT(T13):DA(S-13) DT(T14):DA(S-14) DT(T15):DA(S-15) DA(T16):DT(S-16) DA(T17):DT(S-17) DC(T18):DG(S-18) DC(T19):DG(S-19) DG(T20):DC(S-20) DC(T21):DG(S-21) DC(T22):DG(S-22) DA(T23):DT(S-23) DA(T24):DT(S-24) DG(T25):DC(S-25) DG(T26):DC(S-26) DG(T27):DC(S-27) DG(T28):DC(S-28) DA(T29):DT(S-29) DT(T30):DA(S-30) DT(T31):DA(S-31) DA(T32):DT(S-32) DC(T33):DG(S-33) DT(T34):DA(S-34) DC(T35):DG(S-35) DC(T36):DG(S-36) DC(T37):DG(S-37) DT(T38):DA(S-38) DA(T39):DT(S-39) DG(T40):DC(S-40) DT(T41):DA(S-41) DC(T42):DG(S-42) DT(T43):DA(S-43) DC(T44):DG(S-44) DC(T45):DG(S-45) DA(T46):DT(S-46) DG(T47):DC(S-47) DG(T48):DC(S-48) DC(T49):DG(S-49) DA(T50):DT(S-50) DC(T51):DG(S-51) DG(T52):DC(S-52) DT(T53):DA(S-53) DG(T54):DC(S-54) DT(T55):DA(S-55) DC(T56):DG(S-56) DA(T57):DT(S-57) DG(T58):DC(S-58) DA(T59):DT(S-59) DT(T60):DA(S-60) DA(T61):DT(S-61) DT(T62):DA(S-62) DA(T63):DT(S-63) DT(T64):DA(S-64) DA(T65):DT(S-65) DC(T66):DG(S-66) DA(T67):DT(S-67) DT(T68):DA(S-68) DC(T69):DG(S-69) DC(T70):DG(S-70) DA(T71):DT(S-71) DG(T72):DC(S-72) DG(T73):DC(S-73) DC(T74):DG(S-74) DC(T75):DG(S-75) DT(T76):DA(S-76) DT(T77):DA(S-77) chainU ( 68) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainV ( 68) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence apvdpectakvgkahvycegndvydvmlnqtnlrdnnnkyyliqlleddaqrnfsvwmrwgrvgkmgQhslvacsgnlnkakeifqkkfldktknnwedrekfekvpgkydmlq/apvdpectakvgkahvycegndvydvmlnqtnlrdnnnkyyliqlleddaqrnfsvwmrwgrvgkmgQhslvacsgnlnkakeifqkkfldktknnwedrekfekvpgkydml >6uso_A:DNA/RNA_polymerases; title=TELOMERASE REVERSE TRANSCRIPTASE PRENUCLEOTIDE BINARY COMPLEX, TERT:DNA organism=Tribolium castaneum DNA sequence DG(E1) DG(E2) DT(E3) DC(E4) DA(E5) DG(E6) DG(E7) DT(E8) DC(E9) DA(E10) DG(E11) DG(E12) DT(E13) DC(E14) DA(E15) chainA (442) PRO442 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 (445) CYS445 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (446) ASN446 0 0 0 0 0 0 0 0 0 0 1 11 1 0 0 prot.sequence mvhyyrlslksrqkapkivnskynsilnialknfrlckkhktkkpvqilallqeiipksyfgtttnlkrfykvvekiltqssfecihlsvlhkcydydaipwlqnvepnlrpklllkhnlflldnivkpiiafyykpiktlngheikfirkeeyisfeskvfhklkkmkylvevqdevkprgvlniipkqdnfraivsifpdsarkpffklltskiykvleekyktsgslytcwseftqktqgqiygikvdirdaygnvkipvlckliqsipthlldsekknfivdhisnqfvafrrkiykwnhgllqgdplsgclcelymafmdrlyfsnldkdafihrtvddyffcsphphkvydfellikgvyqvnptktrtnlpthrhpqdeipycgkifnlttrqvrtlyklppnyeirhkfklwnfnnqisddnparflqkamdfPfiCNsftkfefntvfndqrtvfanfydamicvaykfdaammalrtsflvndfgfiwlvlsstvrayasrafkkivtykggkyrkvtfqclksiawraflavlkrrteiykglidriksrekltmkfhdgevdasyfcklpekfrfvkinrkasi >6usp_A:DNA/RNA_polymerases; title=TELOMERASE REVERSE TRANSCRIPTASE PRODUCT COMPLEX, TERT:DNA organism=Tribolium castaneum DNA sequence DG(E1) DG(E2) DT(E3) DC(E4) DA(E5) DG(E6) DG(E7) DT(E8) DC(E9) DA(E10) DG(E11) DG(E12) DT(E13) DC(E14) DA(E15) DG(E16) chainA (194) ARG194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 (442) PRO442 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 (445) CYS445 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (446) ASN446 0 0 0 0 0 0 0 0 0 0 2 13 3 0 0 0 prot.sequence mvhyyrlslksrqkapkivnskynsilnialknfrlckkhktkkpvqilallqeiipksyfgtttnlkrfykvvekiltqssfecihlsvlhkcydydaipwlqnvepnlrpklllkhnlflldnivkpiiafyykpiktlngheikfirkeeyisfeskvfhklkkmkylvevqdevkprgvlniipkqdnfRaivsifpdsarkpffklltskiykvleekyktsgslytcwseftqktqgqiygikvdirdaygnvkipvlckliqsipthlldsekknfivdhisnqfvafrrkiykwnhgllqgdplsgclcelymafmdrlyfsnldkdafihrtvddyffcsphphkvydfellikgvyqvnptktrtnlpthrhpqdeipycgkifnlttrqvrtlyklppnyeirhkfklwnfnnqisddnparflqkamdfPfiCNsftkfefntvfndqrtvfanfydamicvaykfdaammalrtsflvndfgfiwlvlsstvrayasrafkkivtykggkyrkvtfqclksiawraflavlkrrteiykglidriksrekltmkfhdgevdasyfcklpekfrfvkinrkasi >6usq_A:DNA/RNA_polymerases; title=TELOMERASE REVERSE TRANSCRIPTASE BINARY COMPLEX WITH Y256A MUTATION, TERT:DNA organism=Tribolium castaneum DNA sequence DG(E1) DG(E2) DT(E3) DC(E4) DA(E5) DG(E6) DG(E7) DT(E8) DC(E9) DA(E10) DG(E11) DG(E12) DT(E13) DC(E14) DA(E15) chainA (442) PRO442 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (445) CYS445 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (446) ASN446 0 0 0 0 0 0 0 0 0 0 1 11 1 0 0 prot.sequence mvhyyrlslksrqkapkivnskynsilnialknfrlckkhktkkpvqilallqeiipksyfgtttnlkrfykvvekiltqssfecihlsvlhkcydydaipwlqnvepnlrpklllkhnlflldnivkpiiafyykpiktlngheikfirkeeyisfeskvfhklkkmkylvevqdevkprgvlniipkqdnfraivsifpdsarkpffklltskiykvleekyktsgslytcwseftqktqgqiygikvdirdaagnvkipvlckliqsipthlldsekknfivdhisnqfvafrrkiykwnhgllqgdplsgclcelymafmdrlyfsnldkdafihrtvddyffcsphphkvydfellikgvyqvnptktrtnlpthrhpqdeipycgkifnlttrqvrtlyklppnyeirhkfklwnfnnqisddnparflqkamdfPfiCNsftkfefntvfndqrtvfanfydamicvaykfdaammalrtsflvndfgfiwlvlsstvrayasrafkkivtykggkyrkvtfqclksiawraflavlkrrteiykglidriksrekltmkfhdgevdasyfcklpekfrfvkinrkasi >6usr_A:DNA/RNA_polymerases; title=TELOMERASE REVERSE TRANSCRIPTASE TERNARY COMPLEX, TERT:DNA:DGPCPP organism=Tribolium castaneum DNA sequence DG(E1) DG(E2) DT(E3) DC(E4) DA(E5) DG(E6) DG(E7) DT(E8) DC(E9) DA(E10) DG(E11) DG(E12) DT(E13) DC(E14) DA(E15) chainA (442) PRO442 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 (445) CYS445 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (446) ASN446 0 0 0 0 0 0 0 0 0 0 1 11 4 0 0 prot.sequence mvhyyrlslksrqkapkivnskynsilnialknfrlckkhktkkpvqilallqeiipksyfgtttnlkrfykvvekiltqssfecihlsvlhkcydydaipwlqnvepnlrpklllkhnlflldnivkpiiafyykpiktlngheikfirkeeyisfeskvfhklkkmkylvevqdevkprgvlniipkqdnfraivsifpdsarkpffklltskiykvleekyktsgslytcwseftqktqgqiygikvdirdaygnvkipvlckliqsipthlldsekknfivdhisnqfvafrrkiykwnhgllqgdplsgclcelymafmdrlyfsnldkdafihrtvddyffcsphphkvydfellikgvyqvnptktrtnlpthrhpqdeipycgkifnlttrqvrtlyklppnyeirhkfklwnfnnqisddnparflqkamdfPfiCNsftkfefntvfndqrtvfanfydamicvaykfdaammalrtsflvndfgfiwlvlsstvrayasrafkkivtykggkyrkvtfqclksiawraflavlkrrteiykglidrikskltmhdgevdasyfcklpekfrfvkinrkasi >6uvw_D:Homing_endonucleases; title=ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE WITH IMPROVED THERMOSTABILITY organism=SYNTHETIC CONSTRUCT DNA sequence DG(E0):DC(F26) DG(E1):DC(F25) DT(E2):DA(F24) DT(E3):DA(F23) DT(E4):DA(F22) DC(E5):DG(F21) DC(E6):DG(F20) DA(E7):DT(F19) DC(E8):DG(F18) DT(E9):DA(F17) DT(E10):DA(F16) DA(E11):DT(F15) DT(E12):DA(F14) DT(E13):DA(F13) DC(E14):DG(F12) DA(E15):DT(F11) DA(E16):DT(F10) DC(E17):DG(F9) DC(E18):DG(F8) DT(E19):DA(F7) DT(E20):DA(F6) DT(E21):DA(F5) DT(E22):DA(F4) DA(E23):DT(F3) DG(E24):DC(F2) DG(E25):DC(F1) chainD ( 18) SER24 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG28 0 0 0 0 0 2 12 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG30 0 0 0 0 2 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN32 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS34 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER40 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLU42 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN46 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR48 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) SER72 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ALA76 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LYS80 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) CYS180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (175) PHE182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 2 0 0 0 0 0 0 0 (177) ASN184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 (179) ILE186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (188) GLN195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 15 0 0 0 (190) GLN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 (196) THR203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 (216) TYR223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (218) LYS225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 (220) LYS227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 (222) LYS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (225) PHE232 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (227) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 1 19 7 1 0 0 0 0 0 0 0 0 0 (233) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence resinpwiltgfadaegSfllRiRkNnKssvgyStElgfQiTlhnkdksileniqstwgvgvianSgdnAvslKvtrfedlkviidhfekyplitqkyadymlfkqafnvmenkehltiegikelvrikaklnwgltdelkkafpeiskerslinknipnfkwlagftsgegCfFvNlIksksklgvQvQlvfsiTqhirdknlmnslitylgcgYiKkKnKseFsWldfvvTkfsdirdkiipffqeytligtklkdfedwckvaklieekkhlteegldeikkiklnmnkgrvf >6uw0_B:Homing_endonucleases; title=ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE WITH IMPROVED THERMOSTABILITY AND FULLY ALTERED SPECIFICITY TARGETING CHOLERA TOXIN A SUBUNIT organism=SYNTHETIC CONSTRUCT DNA sequence DG(C0):DC(D26) DG(C1):DC(D25) DT(C2):DA(D24) DG(C3):DC(D23) DT(C4):DA(D22) DC(C5):DG(D21) DT(C6):DA(D20) DG(C7):DC(D19) DG(C8):DC(D18) DT(C9):DA(D17) DC(C10):DG(D16) DA(C11):DT(D15) DT(C12):DA(D14) DT(C13):DA(D13) DC(C14):DG(D12) DT(C15):DA(D11) DA(C16):DT(D10) DC(C17):DG(D9) DT(C18):DA(D8) DT(C19):DA(D7) DA(C20):DT(D6) DT(C21):DA(D5) DT(C22):DA(D4) DA(C23):DT(D3) DG(C24):DC(D2) DG(C25):DC(D1) chainB ( 18) SER24 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG28 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG30 0 0 0 0 1 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG32 0 0 24 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS34 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLU42 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLU46 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) LYS48 0 0 0 0 0 0 0 0 0 10 15 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) SER72 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ALA76 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG78 0 0 0 0 0 0 2 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG80 0 0 0 0 0 0 4 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) TRP140 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) CYS180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (176) PHE182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 (178) ASN184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 (180) LEU186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 1 0 0 0 0 (189) GLN195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 0 0 0 (191) CYS197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (195) SER201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (217) TYR223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (219) LEU225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (221) LYS227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 6 0 0 0 0 0 0 0 (226) PHE232 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (228) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 11 8 0 0 0 0 0 0 0 0 0 (230) GLU236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 (234) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 prot.sequence assinpwiltgfadaegSfglRiRkRnKssvgystElgfEiKlhnkdksileniqstwgvgvianSgsnAvRlRvtrfedlkviidhfekyplitqkyadymlfkqafnvmenkehltiegikelvrikaklnWgltdelkkafpeiiskerslinknipnfkwlagftsgegCfFvNlLksksklgvQvClvfSigqhirdknlmnslitylgcgYiLkKnkseFsWlEfcvTkfsdirdkiipffqeytligtklkdfedwckvaklieekkhlteegldeikkiklnmnkgr >6uwg_A:Homing_endonucleases; title=ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE WITH IMPROVED THERMOSTABILITY AND E178D MUTATION AT CATALYTIC SITE organism=SYNTHETIC CONSTRUCT DNA sequence DG(B0):DC(C26) DG(B1):DC(C25) DT(B2):DA(C24) DT(B3):DA(C23) DT(B4):DA(C22) DC(B5):DG(C21) DC(B6):DG(C20) DA(B7):DT(C19) DC(B8):DG(C18) DT(B9):DA(C17) DT(B10):DA(C16) DA(B11):DT(C15) DT(B12):DA(C14) DT(B13):DA(C13) DC(B14):DG(C12) DA(B15):DT(C11) DA(B16):DT(C10) DC(B17):DG(C9) DC(B18):DG(C8) DT(B19):DA(C7) DT(B20):DA(C6) DT(B21):DA(C5) DT(B22):DA(C4) DA(B23):DT(C3) DG(B24):DC(C2) chainA ( 19) SER24 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG28 0 0 0 0 0 2 11 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG30 0 0 0 0 2 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ASN32 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS34 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER40 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLU42 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN46 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) LYS52 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) SER72 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) LYS80 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) THR82 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) TRP140 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) CYS180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (177) PHE182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 0 (179) ASN184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 (181) ILE186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 2 0 0 0 (185) SER190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (190) GLN195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 16 0 0 (192) GLN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 (198) THR203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 (218) TYR223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (220) LYS225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 (222) LYS227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 (224) LYS229 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 1 0 0 0 0 0 0 0 0 0 (227) PHE232 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 (229) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 3 18 3 0 0 0 0 0 0 0 0 0 (231) ASP236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (235) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (294) LYS299 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rresinpwiltgfadaegSfllRiRkNnKssvgyStElgfQiTlHnKdksileniqstwgvgvianSgdnavSlKvTrfedlkviidhfekyplitqkyadymlfkqafnvmenkehltiegikelvrikaklnWgltdelkkafpeiiskerslinknipnfkwlagftsgdgCfFvNlIkSkSklgvQvQlvfsiTqhirdknlmnslitylgcgYiKkKnKseFsWlDfvvTkfsdirdkiipffqeytligtklkdfedwckvaklieekkhlteegldeikkiklnmnKgrvf >6uwh_A:Homing_endonucleases; title=INTERMEDIATE ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE WITH IMPROVED THERMOSTABILITY AND PARTIALLY ALTERED SPECIFICITY organism=SYNTHETIC CONSTRUCT DNA sequence DG(B0):DC(C26) DG(B1):DC(C25) DT(B2):DA(C24) DT(B3):DA(C23) DT(B4):DA(C22) DC(B5):DG(C21) DC(B6):DG(C20) DA(B7):DT(C19) DC(B8):DG(C18) DT(B9):DA(C17) DT(B10):DA(C16) DA(B11):DT(C15) DT(B12):DA(C14) DT(B13):DA(C13) DC(B14):DG(C12) DG(B15):DC(C11) DA(B16):DT(C10) DC(B17):DG(C9) DC(B18):DG(C8) DT(B19):DA(C7) DT(B20):DA(C6) DT(B21):DA(C5) DT(B22):DA(C4) DA(B23):DT(C3) DG(B24):DC(C2) chainA ( 17) SER24 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG28 0 0 0 0 0 2 12 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG30 0 0 0 0 2 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ASN32 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS34 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER40 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLU42 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN46 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER72 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LYS80 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) TRP140 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) CYS180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (175) PHE182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 2 0 0 0 0 0 0 (177) ASN184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 (179) ILE186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 3 0 0 0 (188) GLN195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 16 0 0 (190) GLN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 (196) SER203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 (216) TYR223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (218) LYS225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 (220) LYS227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 (225) PHE232 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (227) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 4 20 1 0 0 0 0 0 0 0 0 0 (229) GLU236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (233) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (292) LYS299 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssinpwiltgfadaegSfllRiRkNnKssvgyStElgfQiTlHnkdksileniqstwgvgvianSgdnavSlKvtrfedlkviidhfekyplitqkyadymlfkqafnvmenkehltiegikelvrikaklnWgltdelkkafpeiiskerslinknipnfkwlagftsgdgCfFvNlIksksklgvQvQlvfsiSqhirdknlmnslitylgcgYiKkKnkseFsWlEfvvTkfsdirdkiipffqeytligtklkdfedwckvaklieekkhlteegldeikkiklnmnKgr >6uwj_A:Homing_endonucleases; title=INTERMEDIATE ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE WITH IMPROVED THERMOSTABILITY AND PARTIALLY ALTERED SPECIFICITY organism=SYNTHETIC CONSTRUCT DNA sequence DG(B0):DC(C26) DG(B1):DC(C25) DT(B2):DA(C24) DT(B3):DA(C23) DT(B4):DA(C22) DC(B5):DG(C21) DC(B6):DG(C20) DA(B7):DT(C19) DC(B8):DG(C18) DT(B9):DA(C17) DT(B10):DA(C16) DA(B11):DT(C15) DT(B12):DA(C14) DT(B13):DA(C13) DC(B14):DG(C12) DG(B15):DC(C11) DA(B16):DT(C10) DC(B17):DG(C9) DC(B18):DG(C8) DT(B19):DA(C7) DC(B20):DG(C6) DT(B21):DA(C5) DC(B22):DG(C4) DA(B23):DT(C3) DG(B24):DC(C2) chainA ( 18) SER24 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LEU26 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG28 0 0 0 0 0 2 12 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG30 0 0 0 0 2 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN32 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS34 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER40 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) GLU42 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLN46 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) THR48 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) HIS50 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) LYS52 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) SER72 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LYS80 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) THR82 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) TRP140 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) CYS180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (176) PHE182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 0 (178) ASN184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 (180) SER186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 (182) LYS188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 7 1 0 (184) THR190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (189) GLN195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 12 0 0 (191) LYS197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 2 0 0 0 (197) SER203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 (217) TYR223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (219) LYS225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 (221) LYS227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 (223) LYS229 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 3 0 0 0 0 0 0 0 0 0 (226) PHE232 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 (228) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 2 18 3 0 0 0 0 0 0 0 0 0 (230) GLU236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 (234) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (293) LYS299 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence assinpwiltgfadaegSfLlRiRkNnKssvgyStElgfQiTlHnKdksileniqstwgvgvianSgdnavSlKvTrfedlkviidhfekyplitqkyadymlfkqafnvmenkehltiegikelvrikaklnWgltdelkkafpeiiskerslinknipnfkwlagftsgdgCfFvNlSkKkTklgvQvKlvfsiSqhirdknlmnslitylgcgYiKkKnKseFsWlEfvvTkfsdirdkiipffqeytligtklkdfedwckvaklieekkhlteegldeikkiklnmnK >6uwk_A:Homing_endonucleases; title=ENGINEERED VARIANT OF I-ONUI MEGANUCLEASE WITH IMPROVED STABILITY AND FULLY ALTERED SPECIFICITY TARGETING HUMAN CHROMOSOME 11 TRANS INTEGRATION SITE organism=SYNTHETIC CONSTRUCT DNA sequence DC(C2):DG(B24) DT(C3):DA(B23) DG(C4):DC(B22) DA(C5):DT(B21) DG(C6):DC(B20) DA(C7):DT(B19) DG(C8):DC(B18) DG(C9):DC(B17) DT(C10):DA(B16) DC(C11):DG(B15) DG(C12):DC(B14) DA(C13):DT(B13) DT(C15):DA(B11) DA(C16):DT(B10) DA(C17):DT(B9) DG(C18):DC(B8) DT(C19):DA(B7) DG(C20):DC(B6) DG(C21):DC(B5) DA(C22):DT(B4) DG(C23):DC(B3) DG(C24):DC(B2) DC(C25):DG(B1) DC(C26):DG(B0) chainA ( 18) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 22) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 14 2 0 0 0 0 0 ( 24) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 2 0 0 0 0 ( 26) TYR32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 ( 28) GLN34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 ( 29) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 34) LEU40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 ( 36) GLU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 ( 40) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 ( 66) SER72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 74) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 ( 76) THR82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (134) TRP140 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (174) CYS180 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) PHE182 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ASN184 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) SER186 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) GLN195 0 0 12 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) LYS197 0 0 0 2 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) SER203 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) TYR223 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) LYS225 0 0 0 0 0 2 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) LYS227 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) LYS229 0 0 0 0 0 0 0 0 0 1 5 5 0 0 0 0 0 0 0 0 0 0 0 0 (226) PHE232 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (228) TRP234 0 0 0 0 0 0 0 0 0 4 26 2 0 0 0 0 0 0 0 0 0 0 0 0 (230) GLU236 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) THR240 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence assinpwiltgfadaegSfllRiRkYsQTrvgyLtElgfQitlhnkdksileniqstwgvgvianSgdnavslKvTrfedlkviidhfekyplitqkyadymlfkqafnvmenkehltiegikelvrikaklnWgltdelkkafpeiiskerslinknipnfkwlagftsgdgCfFvNlSkkktklgvQvKlvfsiSqhirdknlmnslitylgcgYiKkKnKseFsWlEfvvTkfsdirdkiipffqeytligtklkdfedwckvaklieekkhlteegldeikkiklnmnkg >6v0v_A: title=CRYO-EM STRUCTURE OF MOUSE WT RAG1/2 NFC COMPLEX (DNA0) organism=MUS MUSCULUS DNA sequence DG(F17):DC(I30) DC(F18):DG(I29) DT(F19):DA(I28) DG(F20):DC(I27) DT(F21):DA(I26) DA(F22):DT(I25) DT(F23):DA(I24) DC(F24):DG(I23) DA(F25):DT(I22) DC(F26):DG(I21) DT(F27):DA(I20) DG(F28):DC(I19) DT(F29):DA(I18) DG(F30):DC(I17) DT(F31):DA(I16) DA(F32):DT(I15) DA(F33):DT(I14) DG(F34):DC(I13) DA(F35):DT(I12) DC(F36):DG(I11) DA(F37):DT(I10) DG(F38):DC(I9) DG(F39):DC(I8) DC(F40):DG(I7) DC(F41):DG(I6) DA(F42):DT(I5) DG(F43):DC(I4) DA(F44):DT(I3) DT(F45):DA(I2) DC(F46):DG(I1) chainA (377) LYS844 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (379) ILE846 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) MET847 0 0 0 0 0 0 0 0 0 0 0 0 6 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 19 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) ASN850 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ASN852 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence glqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlKpIMRmNgNfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnesgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna >6v0v_AB:Galactose_oxidase,_central_domain; title=CRYO-EM STRUCTURE OF MOUSE WT RAG1/2 NFC COMPLEX (DNA0) organism=MUS MUSCULUS DNA sequence DG(F17):DC(I30) DC(F18):DG(I29) DT(F19):DA(I28) DG(F20):DC(I27) DT(F21):DA(I26) DA(F22):DT(I25) DT(F23):DA(I24) DC(F24):DG(I23) DA(F25):DT(I22) DC(F26):DG(I21) DT(F27):DA(I20) DG(F28):DC(I19) DT(F29):DA(I18) DG(F30):DC(I17) DT(F31):DA(I16) DA(F32):DT(I15) DA(F33):DT(I14) DG(F34):DC(I13) DA(F35):DT(I12) DC(F36):DG(I11) DA(F37):DT(I10) DG(F38):DC(I9) DG(F39):DC(I8) DC(F40):DG(I7) DC(F41):DG(I6) DA(F42):DT(I5) DG(F43):DC(I4) DA(F44):DT(I3) DT(F45):DA(I2) DC(F46):DG(I1) chainA (377) LYS844 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (379) ILE846 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) MET847 0 0 0 0 0 0 0 0 0 0 0 0 6 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) ARG848 0 0 0 0 0 0 0 0 0 0 0 0 19 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) ASN850 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ASN852 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence glqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlKpIMRmNgNfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnesgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna/mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykgkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkqamseafyfytlrcs >6v2k_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE NUCLEOSOME STRUCTURE AFTER H2A-H2B EXCHANGE organism=HOMO SAPIENS DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 30) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/rakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/srkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/kkphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnysErvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >6v2k_B:Histone-fold; title=THE NUCLEOSOME STRUCTURE AFTER H2A-H2B EXCHANGE organism=? DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DT(J216):DA(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DA(J223):DT(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) chainB ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >6v3k_A:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF HIV CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME BOUND WITH MAGNESIUM AND INSTI XZ419 (COMPOUND 4C) organism=? DNA sequence DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyygpakllwkgegavviqdnsdikvvprrkakii >6v3k_ABC:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF HIV CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME BOUND WITH MAGNESIUM AND INSTI XZ419 (COMPOUND 4C) organism=? DNA sequence DG(E18):DC(F20) DC(E19):DG(F19) DT(E20):DA(F18) DA(E21):DT(F17) DG(E22):DC(F16) DA(E23):DT(F15) DG(E24):DC(F14) DA(E25):DT(F13) DT(E26):DA(F12) DT(E27):DA(F11) DT(E28):DA(F10) DT(E29):DA(F9) DC(E30):DG(F8) DC(E31):DG(F7) DC(E32):DG(F6) DG(E33):DC(F5) chainA ( 51) HIS51 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyygpakllwkgegavviqdnsdikvvprrkakii/fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcspgiwqlDcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgviesmnkelkkiigqvrdQaehlkTAvqMavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrwkgpakllwkgegavviqdnsdikvvprrkakiird/lqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprRkakiirdygkqmag >6v5k_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA COMPLEXED WITH N7- NITROGEN HALF-MUSTARD GUANINE (NHMG) AND DCTP* organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DT(P3):DA(T10) DG(P4):DC(T9) DT(P5):DA(T8) DG(P6):DC(T7) DA(P7):DT(T6) DG(P8):DC(T5) chainA (317) SER322 0 0 0 0 0 0 1 0 (377) ARG382 0 6 6 0 0 0 0 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >6v7b_I: title=CRYO-EM RECONSTRUCTION OF PYROBACULUM FILAMENTOUS VIRUS 2 (PFV2) organism=PYROBACULUM FILAMENTOUS VIRUS 1 DNA sequence DA(1-27):DT(2532) DT(1-26):DA(2531) DA(1-25):DT(2530) DT(1-24):DA(2529) DA(1-23):DT(2528) DT(1-22):DA(2527) DA(1-21):DT(2526) DT(1-20):DA(2525) DA(1-19):DT(2524) DT(1-18):DA(2523) DA(1-17):DT(2522) DT(1-16):DA(2521) DA(1-15):DT(2520) DT(1-14):DA(2519) DA(1-13):DT(2518) DT(1-12):DA(2517) DA(1-11):DT(2516) DT(1-10):DA(2515) DA(1-9):DT(2514) DT(1-8):DA(2513) DA(1-7):DT(2512) DT(1-6):DA(2511) DA(1-5):DT(2510) DT(1-4):DA(2509) DA(1-3):DT(2508) DT(1-2):DA(2507) DA(1-1):DT(2506) DT(10):DA(2505) DA(11):DT(2504) DT(12):DA(2503) DA(13):DT(2502) DT(14):DA(2501) DA(15):DT(2500) DT(16):DA(2499) DA(17):DT(2498) DT(18):DA(2497) DA(19):DT(2496) DT(110):DA(2495) DA(111):DT(2494) DT(112):DA(2493) DA(113):DT(2492) DT(114):DA(2491) DA(115):DT(2490) DT(116):DA(2489) DA(117):DT(2488) DT(118):DA(2487) DA(119):DT(2486) DT(120):DA(2485) DA(121):DT(2484) DT(122):DA(2483) DA(123):DT(2482) DT(124):DA(2481) DA(125):DT(2480) DT(126):DA(2479) DA(127):DT(2478) DT(128):DA(2477) DA(129):DT(2476) DT(130):DA(2475) DA(131):DT(2474) DT(132):DA(2473) DA(133):DT(2472) DT(134):DA(2471) DA(135):DT(2470) DT(136):DA(2469) DA(137):DT(2468) DT(138):DA(2467) DA(139):DT(2466) DT(140):DA(2465) DA(141):DT(2464) DT(142):DA(2463) DA(143):DT(2462) DT(144):DA(2461) DA(145):DT(2460) DT(146):DA(2459) DA(147):DT(2458) DT(148):DA(2457) DA(149):DT(2456) DT(150):DA(2455) DA(151):DT(2454) DT(152):DA(2453) DA(153):DT(2452) DT(154):DA(2451) DA(155):DT(2450) DT(156):DA(2449) DA(157):DT(2448) DT(158):DA(2447) DA(159):DT(2446) DT(160):DA(2445) DA(161):DT(2444) DT(162):DA(2443) DA(163):DT(2442) DT(164):DA(2441) DA(165):DT(2440) DT(166):DA(2439) DA(167):DT(2438) DT(168):DA(2437) DA(169):DT(2436) DT(170):DA(2435) DA(171):DT(2434) DT(172):DA(2433) DA(173):DT(2432) DT(174):DA(2431) DA(175):DT(2430) DT(176):DA(2429) DA(177):DT(2428) DT(178):DA(2427) DA(179):DT(2426) DT(180):DA(2425) DA(181):DT(2424) DT(182):DA(2423) DA(183):DT(2422) DT(184):DA(2421) DA(185):DT(2420) DT(186):DA(2419) DA(187):DT(2418) DT(188):DA(2417) DA(189):DT(2416) DT(190):DA(2415) DA(191):DT(2414) DT(192):DA(2413) DA(193):DT(2412) DT(194):DA(2411) DA(195):DT(2410) DT(196):DA(2409) DA(197):DT(2408) DT(198):DA(2407) DA(199):DT(2406) DT(1100):DA(2405) DA(1101):DT(2404) DT(1102):DA(2403) DA(1103):DT(2402) DT(1104):DA(2401) DA(1105):DT(2400) DT(1106):DA(2399) DA(1107):DT(2398) DT(1108):DA(2397) DA(1109):DT(2396) DT(1110):DA(2395) DA(1111):DT(2394) DT(1112):DA(2393) DA(1113):DT(2392) DT(1114):DA(2391) DA(1115):DT(2390) DT(1116):DA(2389) DA(1117):DT(2388) DT(1118):DA(2387) DA(1119):DT(2386) DT(1120):DA(2385) DA(1121):DT(2384) DT(1122):DA(2383) DA(1123):DT(2382) DT(1124):DA(2381) DA(1125):DT(2380) DT(1126):DA(2379) DA(1127):DT(2378) DT(1128):DA(2377) DA(1129):DT(2376) DT(1130):DA(2375) DA(1131):DT(2374) DT(1132):DA(2373) DA(1133):DT(2372) DT(1134):DA(2371) DA(1135):DT(2370) DT(1136):DA(2369) DA(1137):DT(2368) DT(1138):DA(2367) DA(1139):DT(2366) DT(1140):DA(2365) DA(1141):DT(2364) DT(1142):DA(2363) DA(1143):DT(2362) DT(1144):DA(2361) DA(1145):DT(2360) DT(1146):DA(2359) DA(1147):DT(2358) DT(1148):DA(2357) DA(1149):DT(2356) DT(1150):DA(2355) DA(1151):DT(2354) DT(1152):DA(2353) DA(1153):DT(2352) DT(1154):DA(2351) DA(1155):DT(2350) DT(1156):DA(2349) DA(1157):DT(2348) DT(1158):DA(2347) DA(1159):DT(2346) DT(1160):DA(2345) DA(1161):DT(2344) DT(1162):DA(2343) DA(1163):DT(2342) DT(1164):DA(2341) DA(1165):DT(2340) DT(1166):DA(2339) DA(1167):DT(2338) DT(1168):DA(2337) DA(1169):DT(2336) DT(1170):DA(2335) DA(1171):DT(2334) DT(1172):DA(2333) DA(1173):DT(2332) DT(1174):DA(2331) DA(1175):DT(2330) DT(1176):DA(2329) DA(1177):DT(2328) DT(1178):DA(2327) DA(1179):DT(2326) DT(1180):DA(2325) DA(1181):DT(2324) DT(1182):DA(2323) DA(1183):DT(2322) DT(1184):DA(2321) DA(1185):DT(2320) DT(1186):DA(2319) DA(1187):DT(2318) DT(1188):DA(2317) DA(1189):DT(2316) DT(1190):DA(2315) DA(1191):DT(2314) DT(1192):DA(2313) DA(1193):DT(2312) DT(1194):DA(2311) DA(1195):DT(2310) DT(1196):DA(2309) DA(1197):DT(2308) DT(1198):DA(2307) DA(1199):DT(2306) DT(1200):DA(2305) DA(1201):DT(2304) DT(1202):DA(2303) DA(1203):DT(2302) DT(1204):DA(2301) DA(1205):DT(2300) DT(1206):DA(2299) DA(1207):DT(2298) DT(1208):DA(2297) DA(1209):DT(2296) DT(1210):DA(2295) DA(1211):DT(2294) DT(1212):DA(2293) DA(1213):DT(2292) DT(1214):DA(2291) DA(1215):DT(2290) DT(1216):DA(2289) DA(1217):DT(2288) DT(1218):DA(2287) DA(1219):DT(2286) DT(1220):DA(2285) DA(1221):DT(2284) DT(1222):DA(2283) DA(1223):DT(2282) DT(1224):DA(2281) DA(1225):DT(2280) DT(1226):DA(2279) DA(1227):DT(2278) DT(1228):DA(2277) DA(1229):DT(2276) DT(1230):DA(2275) DA(1231):DT(2274) DT(1232):DA(2273) DA(1233):DT(2272) DT(1234):DA(2271) DA(1235):DT(2270) DT(1236):DA(2269) DA(1237):DT(2268) DT(1238):DA(2267) DA(1239):DT(2266) DT(1240):DA(2265) DA(1241):DT(2264) DT(1242):DA(2263) DA(1243):DT(2262) DT(1244):DA(2261) DA(1245):DT(2260) DT(1246):DA(2259) DA(1247):DT(2258) DT(1248):DA(2257) DA(1249):DT(2256) DT(1250):DA(2255) DA(1251):DT(2254) DT(1252):DA(2253) DA(1253):DT(2252) DT(1254):DA(2251) DA(1255):DT(2250) DT(1256):DA(2249) DA(1257):DT(2248) DT(1258):DA(2247) DA(1259):DT(2246) DT(1260):DA(2245) DA(1261):DT(2244) DT(1262):DA(2243) DA(1263):DT(2242) DT(1264):DA(2241) DA(1265):DT(2240) DT(1266):DA(2239) DA(1267):DT(2238) DT(1268):DA(2237) DA(1269):DT(2236) DT(1270):DA(2235) DA(1271):DT(2234) DT(1272):DA(2233) DA(1273):DT(2232) DT(1274):DA(2231) DA(1275):DT(2230) DT(1276):DA(2229) DA(1277):DT(2228) DT(1278):DA(2227) DA(1279):DT(2226) DT(1280):DA(2225) DA(1281):DT(2224) DT(1282):DA(2223) DA(1283):DT(2222) DT(1284):DA(2221) DA(1285):DT(2220) DT(1286):DA(2219) DA(1287):DT(2218) DT(1288):DA(2217) DA(1289):DT(2216) DT(1290):DA(2215) DA(1291):DT(2214) DT(1292):DA(2213) DA(1293):DT(2212) DT(1294):DA(2211) DA(1295):DT(2210) chainI ( 9) HIS18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) TRP31 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0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TRP43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ALA62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ILE65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ALA66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence svevYrqkiekggYsaayeatrryereeievlswssrWesaWskfgeavkalgkiegaprAlvIAkvQealaymskplpnmklamaaavqavraceqlpgmnrercldavagalgvakdwirremt >6v8u_A:beta-beta-alpha_zinc_fingers; title=KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH A MODIFIED KAISO BINDING SEQUENCE (KBS) organism=Homo sapiens DNA sequence DG(E20):DC(D17) DT(E21):DA(D16) DT(E22):DA(D15) DA(E23):DT(D14) DT(E24):DA(D13) DT(E25):DA(D12) DG(E26):DC(D11) DG(E27):DC(D10) DC(E28):DG(D9) DA(E29):DT(D8) DC(E30):DG(D7) DG(E31):DC(D6) DA(E32):DT(D5) DA(E33):DT(D4) DG(E34):DC(D3) DC(E35):DG(D2) DA(E36):DT(D1) chainA ( 27) THR507 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 28) SER508 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 31) ARG511 0 0 0 0 0 0 1 7 11 13 0 0 0 0 0 0 0 ( 53) LEU533 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 55) GLU535 0 0 0 0 0 0 0 2 5 12 3 0 0 0 0 0 0 ( 56) TYR536 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 59) LYS539 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 ( 81) ASN561 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 82) TYR562 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 ( 83) GLN563 0 0 0 0 0 0 0 0 0 0 5 5 12 2 0 0 0 (115) ARG595 0 0 0 0 3 9 8 5 0 0 0 0 0 0 0 0 0 (117) TYR597 0 0 0 0 0 2 1 7 0 0 0 0 0 0 0 0 0 prot.sequence ddhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfpLaEYrtKheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqYayl >6v92_d:Histone-fold; title=RSC-NCP organism=? DNA sequence DA(i1):DT(j292) DT(i2):DA(j291) DC(i3):DG(j290) DA(i4):DT(j289) DA(i5):DT(j288) DT(i6):DA(j287) DA(i7):DT(j286) DT(i8):DA(j285) DC(i9):DG(j284) DC(i10):DG(j283) DA(i11):DT(j282) DC(i12):DG(j281) DC(i13):DG(j280) DT(i14):DA(j279) DG(i15):DC(j278) DC(i16):DG(j277) DA(i17):DT(j276) DG(i18):DC(j275) DA(i19):DT(j274) DT(i20):DA(j273) DT(i21):DA(j272) DC(i22):DG(j271) DT(i23):DA(j270) DA(i24):DT(j269) DC(i25):DG(j268) DC(i26):DG(j267) DA(i27):DT(j266) DA(i28):DT(j265) DA(i29):DT(j264) DA(i30):DT(j263) DG(i31):DC(j262) DT(i32):DA(j261) DG(i33):DC(j260) DT(i34):DA(j259) DA(i35):DT(j258) DT(i36):DA(j257) DT(i37):DA(j256) DT(i38):DA(j255) DG(i39):DC(j254) DG(i40):DC(j253) DA(i41):DT(j252) DA(i42):DT(j251) DA(i43):DT(j250) DC(i44):DG(j249) DT(i45):DA(j248) DG(i46):DC(j247) DC(i47):DG(j246) DT(i48):DA(j245) DC(i49):DG(j244) DC(i50):DG(j243) DA(i51):DT(j242) DT(i52):DA(j241) DC(i53):DG(j240) DA(i54):DT(j239) DA(i55):DT(j238) DA(i56):DT(j237) DA(i57):DT(j236) DG(i58):DC(j235) DG(i59):DC(j234) DC(i60):DG(j233) DA(i61):DT(j232) DT(i62):DA(j231) DG(i63):DC(j230) DT(i64):DA(j229) DT(i65):DA(j228) DC(i66):DG(j227) DA(i67):DT(j226) DG(i68):DC(j225) DC(i69):DG(j224) DT(i70):DA(j223) DG(i71):DC(j222) DA(i72):DT(j221) DA(i73):DT(j220) DT(i74):DA(j219) DT(i75):DA(j218) DC(i76):DG(j217) DA(i77):DT(j216) DG(i78):DC(j215) DC(i79):DG(j214) DT(i80):DA(j213) DG(i81):DC(j212) DA(i82):DT(j211) DA(i83):DT(j210) DC(i84):DG(j209) DA(i85):DT(j208) DT(i86):DA(j207) DG(i87):DC(j206) DC(i88):DG(j205) DC(i89):DG(j204) DT(i90):DA(j203) DT(i91):DA(j202) DT(i92):DA(j201) DT(i93):DA(j200) DG(i94):DC(j199) DA(i95):DT(j198) DT(i96):DA(j197) DG(i97):DC(j196) DG(i98):DC(j195) DA(i99):DT(j194) DG(i100):DC(j193) DC(i101):DG(j192) DA(i102):DT(j191) DG(i103):DC(j190) DT(i104):DA(j189) DT(i105):DA(j188) DT(i106):DA(j187) DC(i107):DG(j186) DC(i108):DG(j185) DA(i109):DT(j184) DA(i110):DT(j183) DA(i111):DT(j182) DT(i112):DA(j181) DA(i113):DT(j180) DC(i114):DG(j179) DA(i115):DT(j178) DC(i116):DG(j177) DT(i117):DA(j176) DT(i118):DA(j175) DT(i119):DA(j174) DT(i120):DA(j173) DG(i121):DC(j172) DG(i122):DC(j171) DT(i123):DA(j170) DA(i124):DT(j169) DG(i125):DC(j168) DA(i126):DT(j167) DA(i127):DT(j166) DT(i128):DA(j165) DC(i129):DG(j164) DT(i130):DA(j163) DG(i131):DC(j162) DC(i132):DG(j161) DA(i133):DT(j160) DG(i134):DC(j159) DG(i135):DC(j158) DT(i136):DA(j157) DG(i137):DC(j156) DG(i138):DC(j155) DA(i139):DT(j154) DT(i140):DA(j153) DA(i141):DT(j152) DT(i142):DA(j151) DT(i143):DA(j150) DG(i144):DC(j149) DA(i145):DT(j148) DT(i146):DA(j147) chaind ( 10) VAL36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krsrkesysVyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6v93_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF DNA POLYMERASE ZETA/DNA/DNTP TERNARY COMPLEX organism=? DNA sequence DC(P105):DG(T15) DC(P106):DG(T14) DC(P107):DG(T13) DT(P108):DA(T12) DC(P109):DG(T11) DC(P110):DG(T10) DC(P111):DG(T9) DC(P112):DG(T8) DT(P113):DA(T7) DA(P114):DT(T6) DC(P115):DG(T5) chainA (998) LYS1194 0 0 0 0 0 0 0 0 4 6 0 (999) ARG1195 0 0 0 0 0 0 2 0 0 0 0 (1024) ARG1220 0 0 0 0 0 0 5 5 0 0 0 (1026) ASP1222 0 0 0 0 0 0 1 0 0 0 0 prot.sequence sdyfriqlnnqdyymskptfldpshgeslplnqfsqvpnirvfgalptghqvlchvhgilpymfikydgqitdtstlrhqrcaqvhktlevkirasfkklgnlnfvadvsvvkgipfygyhvgwnlfykisllnpsclsriselirdgkifgkkfeiyeshipyllqwtadfnlfgcswinvdrcyfrspvlnsildidkltinddlqllldrfcdfkcnvlsrrdfprvgnglieidilpqfiknreklqhrdihhdfleklvkpyvssardmineltmqreelslkeykeppetkrhvsghqwqssgefeafykkaqhktstgqipnfenfidknqkfsaintpyealpqlwprlpqiaglrygkrafvygeppfgyqdilnkledegfpkidykdpffsnpvdlenkpyayagkrfeissthvstripvqfggetvsvynkptfdmfsswkyalkpptydavqkwynkvpsvhdslthltleihantrsdkipdpaidevsmiiwcleeetfpldldiayegimivhkadstfptkiqhcineipvmfyesefemfealtdlvllldpdilsgfeihnfswgyiiercqkihqfdivrelarvkcsdtwgyahssgimitgrhminiwralrsdvnltqytiesaafnilhkrlphfsfesltnmwnakksttelktvlnywlsraqiniqllrkqdyiarnieqarligidfhsvyyrgsqfkvesfliricksesfillspgkkdvrkqkalecvplvmepesafyksplivldfqslypsimigynycystmigrvreinltennlgvskfslprnilallkndvtiapngvvyaktsvrkstlskmltdildvrvmikktmneigddnttlkrllnnkqlalkllanvtygytsasfsgrmpcsdladsivqtgretlekaidiiekdetwnakvvygdtdslfvylpgktaieafsighamaervtqnnpkpiflkfekvyhpsiliskKRyvgfsyespsqtlpifdakgietvRrDgipaqqkiiekcirllfqtkdlskikkylqneffkiqigkvsaqdfcfakevklgayksektapagavvvkrrinedhraepqykeripylvvkgkqgqllrercvspeeflegenleldseyyinkilippldrlfnliginvgnwaqeekrstttlsflikklkrqkeyqtlktvcrtcsyrytsdagiendhiaskcnsydcpvfysrvkaerylrdnqsvqreealisl >6vaa_A:ARM_repeat; title=STRUCTURE OF THE FANCONI ANEMIA ID COMPLEX BOUND TO ICL DNA organism=HOMO SAPIENS DNA sequence DT(X2):DA(W48) DT(X3):DA(W47) DT(X4):DA(W46) DT(X5):DA(W45) DT(X6):DA(W44) DT(X7):DA(W43) DT(X8):DA(W42) DT(X9):DA(W41) DT(X10):DA(W40) DT(X11):DA(W39) DT(X12):DA(W38) DT(X13):DA(W37) DT(X14):DA(W36) DT(X15):DA(W35) DT(X16):DA(W34) DT(X17):DA(W33) DT(X18):DA(W32) DT(X19):DA(W31) chainA (736) LYS793 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdqkilslaaektadklqeflqtlregdltnllqnqavkgkvagallraifkgspcseeagtlrrrkiytcciqlvesgdlqkeivseiigllmleahhfpgpllvelanefisavregslvngkslellpiiltvlatkkenlaylsgeeckkqlintlcsgrwdqqyviqltsmfkdvpltaeevefvvekalsmfskmnlqeipplvyqllvlsskgsrksvlegiiaffsaldkqhneeqspsgelrhvegtiilhivfaikldyelgrelvkhlkvgqqgdsnnnlspfsialllsvtriqrfqdqvldllktsvvksfkdlqllqgskflqnlvphrsyvstmilevvknsvhswdhvtqglvelgfilmdsygpkkvlpslsrmpnqhacklganilletfkihemirqeileqvlnrvvtrasspishfldllsnivmyaplvlqncsskvteafdylsflplqtvqrllkavqpllkvsmsmrdclilvlrkamfanqldarksavagfllllknfkvlynsvanetfcleimdslrrclsqqadvrlmlyegfydvlrrnsqlansvmqtllsqlkqfyepepdllpplkleaciltqgdqislqepldyllcciqhclawykntvipeafyedlddilesitnrmikseledfeldksadfsqstsigiknnisaflvmgvcevlieynfsissfsknrfedilslfmcykklsdilnekagkaKtkmanktsdsllsmkfvsslltalfrdsiqshqeslsvlrssnefmryavnvalqkvqqlketghvsgpdgqnpekifqnlcdltrvllwrytsiptsveesgkkekgksisllcleglqkifsavqqfyqpkiqqflralvsvtqrtafqirqfqrsllnllssqeedfnskealllvtvltslskllepsspqfvqmlswtskickensredalfckslmnllfslhvsykspvillrdlsqdihghlgdidqdvevektnhfaivnlrtaaptvcllvlsqaekvleevdwlitklkgqvpnqpvekaiimqlgtlltffhelvqtalpsgscvdtllkdlckmyttltalvryylqvcqssggipknmeklvklsgshltplcysfisyvqnkstkpipnlifaieqyekflihlskkskvslmqhmk >6vae_A:ARM_repeat; title=MONO-UBIQUITINATED FANCONI ANEMIA ID COMPLEX BOUND TO ICL DNA organism=HOMO SAPIENS DNA sequence DG(T30):DC(S29) DA(T31):DT(S28) DA(T32):DT(S27) DC(T33):DG(S26) DG(T34):DC(S25) DG(T35):DC(S24) DA(T36):DT(S23) DA(T37):DT(S22) DC(T38):DG(S21) DG(T39):DC(S20) DC(T40):DG(S19) DC(T41):DG(S18) DT(T42):DA(S17) DG(T43):DC(S16) DC(T44):DG(S15) DT(T45):DA(S14) DC(T46):DG(S13) DT(T47):DA(S12) DG(T48):DC(S11) DA(T49):DT(S10) DA(T50):DT(S9) DC(T51):DG(S8) DC(T52):DG(S7) DT(T53):DA(S6) DG(T54):DC(S5) DT(T55):DA(S4) DG(T56):DC(S3) DC(T57):DG(S2) DC(T58):DG(S1) chainA (734) LYS793 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (1146) ARG1245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence mdqkilslaaektadklqeflqtlregdltnllqnqavkgkvagallraifkgspcseeagtlrrrkiytcciqlvesgdlqkeivseiigllmleahhfpgpllvelanefisavregslvngkslellpiiltvlatkkenllsgeeckkqlintlcsgrwdqqyviqltsmfkdvpltaeevefvvekalsmfskmnlqeipplvyqllvlsskgsrksvlegiiaffsaldkqhneeqspsgelrhvegtiilhivfaikldyelgrelvkhlkvgqqgdsnnnlspfsialllsvtriqrfqdqvldllktsvvksfkdlqllqgskflqnlvphrsyvstmilevvknsvhswdhvtqglvelgfilmdsygpkkvlpslsrmpnqhacklganilletfkihemirqeileqvlnrvvtrasspishfldllsnivmyaplvlqncsskvteafdylsflplqtvqrllkavqpllkvsmsmrdclilvlrkamfanqldarksavagfllllknfkvlynsvanetfcleimdslrrclsqqadvrlmlyegfydvlrrnsqlansvmqtllsqlkqfyepepdllpplkleaciltqgdqislqepldyllcciqhclawykntvipeafyedlddilesitnrmikseledfeldksadfsqstsigiknnisaflvmgvcevlieynfsissfsknrfedilslfmcykklsdilnekagkaKtkmanktsdsllsmkfvsslltalfrdsiqshqeslsvlrssnefmryavnvalqkvqqlketghvsgpdgqnpekifqnlcdltrvllwrytsiptsveesgkkekgksisllcleglqkifsavqqfyqpkiqqflralvsvtqrtafqirqfqrsllnllssqeedfnskealllvtvltslskllepsspqfvqmlswtskickensredalfckslmnllfslhvsykspvillrdlsqdihghlgdidqdvevektnhfaivnlrtaaptvcllvlsqaekvleevdwlitklkgqvpnqpvekaiimqlgtlltffhelvqtalpsgscvdtllkdlckmyttltalvryylqvcqssggipknmeklvklsgshltplcysfisyvqnkskpavvatamarvlRetkpipnlifaieqyekflihlskkskvslmqhmklstsrdfkikgnildmv >6vbw_BCDEFG: title=CRYO-EM STRUCTURE OF CASCADE-TNIQ-DSDNA TERNARY COMPLEX organism=VIBRIO CHOLERAE DNA sequence DA(L55) DC(L56) DC(L57) DT(L58) DG(L59) DA(L60) DA(L61) DA(L62) DA(L63) DG(L64) DC(L65) DA(L66) DA(L67) DT(L68) DG(L69) DA(L70) DA(L71) DG(L72) DC(L73) DC(L74) DA(L75) DA(L76) DA(L77) DG(L78) DC(L79) DG(L80) DT(L81) DC(L82) DC(L83) DT(L84) DG(L85) DT(L86) DA(L87) DA(L88) DG(L89) DG(L90) DT(L91) DG(L92) DA(L93) chainB ( 45) ALA45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 69) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 70) PRO70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 ( 71) HIS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 (227) PHE227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (232) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 chainC ( 6) ASN6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 40) LEU40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) GLU229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (232) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (335) MET346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 (337) GLN348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 chainD ( 6) ASN6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LEU40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLU44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) LYS102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) PHE227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) GLU229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) LYS239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) MET346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) GLN348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 6) ASN6 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN69 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO70 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS71 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) PHE227 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) GLU229 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) LYS239 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) THR240 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) SER243 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) MET346 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) GLN348 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 6) ASN6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LEU40 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN69 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO70 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS71 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) PHE227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) GLU229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) THR240 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) SER243 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) MET346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 6) ASN6 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) PHE227 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) GLU229 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) LYS230 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) MET346 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) GLN348 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mklptnlayersidpsdvcffvvwpddrktpltynsrtllgqmeAaslaydvsgqpiksataealaqgNPHqvdfchvpygashiecsfsvsfsselrqpykcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFteqnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggmfqh/mklptNlayersidpsdvcffvvwpddrktpltynsrtlLgqmeaaslaydvsgqpiksataealaqgNPHqvdfchvpygashiecsfsvsfsselrqpykcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvftEqnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggMfQhk/mklptNlayersidpsdvcffvvwpddrktpltynsrtlLgqmEaaslaydvsgqpiksataealaqgNPHqvdfchvpygashiecsfsvsfsselrqpyKcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFtEKTqnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggMfQhk/mklptNlayersidpsdvcffvvwpddrktpltynsrtlLgqmeaaslaydvsgqpiksataealaqgNPHqvdfchvpygashiecsfsvsfsselrqpykcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFtETqnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggMfqhk/mklptNlayersidpsdvcffvvwpddrktpltynsrtllgqmeaaslaydvsgqpiksataealaqgNPHqvdfchvpygashiecsfsvsfsselrqpykcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFtEKTqnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggMfQhk/mklptNlayersidpsdvcffvvwpddrktpltynsrtlhqvdfchvpygashiecsfsvsfsselrqpykcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFtEKsrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggMfQhk >6vbw_D: title=CRYO-EM STRUCTURE OF CASCADE-TNIQ-DSDNA TERNARY COMPLEX organism=? DNA sequence DA(L55) DC(L56) DC(L57) DT(L58) DG(L59) DA(L60) DA(L61) DA(L62) DA(L63) DG(L64) DC(L65) DA(L66) DA(L67) DT(L68) DG(L69) DA(L70) DA(L71) DG(L72) DC(L73) DC(L74) DA(L75) DA(L76) DA(L77) DG(L78) DC(L79) DG(L80) DT(L81) DC(L82) DC(L83) DT(L84) DG(L85) DT(L86) DA(L87) DA(L88) DG(L89) DG(L90) DT(L91) DG(L92) DA(L93) chainD ( 6) ASN6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LEU40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLU44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) LYS102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) PHE227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) GLU229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) LYS239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) THR240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) MET346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) GLN348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mklptNlayersidpsdvcffvvwpddrktpltynsrtlLgqmEaaslaydvsgqpiksataealaqgNPHqvdfchvpygashiecsfsvsfsselrqpyKcnsskvkqtlvqlvelyetkigwtelatrylmnicngkwlwkntrkaycwnivltpwpwngekvgfedirtnytsrqdfknnknwsaivemiktafsstdglaifevratlhlptnamvrpsqvFtEKTqnSrvfqsttidgerspilgafktgaaiatiddwypeateplrvgrfgvhredvtcyrhpstgkdffsilqqaehyievlsanktpaqetindmhflmanlikggMfQhk >6vcs_A:PUA_domain-like; title=SRA DOMAIN OF UHRF1 IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DC(C2):DG(D11) DC(C3):DG(D10) DT(C4):DA(D9) DG(C5):DC(D8) DT(C6):DA(D7) DA(C7):DT(D6) DC(C8):DG(D5) DA(C9):DT(D4) DG(C10):DC(D3) DG(C11):DC(D2) chainA ( 1) PRO414 0 0 0 0 0 0 0 0 1 2 ( 2) SER415 0 0 0 0 0 0 0 1 10 4 ( 24) SER437 0 0 0 0 0 0 0 0 0 3 ( 30) ARG443 0 0 0 0 0 0 0 0 0 32 ( 37) HIS450 0 0 0 0 0 0 0 0 0 4 ( 39) ARG452 0 0 0 0 0 0 0 2 1 0 prot.sequence PSnhygpipgipvgtmwrfrvqvSesgvhRphvagiHgRsndgayslvlaggyeddvdhgnfftytgsggqscdqkltntnralalncfapindqegaeakdwrsgkpvrvvrnvkggknskyapaegnrydgiykvvkywpekgksgflvwryllrrdddepgpwtkegkdrikklgltmqypegy >6vcs_ABE:PUA_domain-like; title=SRA DOMAIN OF UHRF1 IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DC(C2):DG(D11) DC(C3):DG(D10) DT(C4):DA(D9) DG(C5):DC(D8) DT(C6):DA(D7) DA(C7):DT(D6) DC(C8):DG(D5) DA(C9):DT(D4) DG(C10):DC(D3) DG(C11):DC(D2) chainA ( 1) PRO414 0 0 0 0 0 0 0 0 1 2 ( 2) SER415 0 0 0 0 0 0 0 1 10 4 ( 24) SER437 0 0 0 0 0 0 0 0 0 3 ( 30) ARG443 0 0 0 0 0 0 0 0 0 32 ( 37) HIS450 0 0 0 0 0 0 0 0 0 4 ( 39) ARG452 0 0 0 0 0 0 0 2 1 0 chainB ( 1) PRO414 1 1 0 0 0 0 0 0 0 0 ( 2) SER415 4 10 0 0 0 0 0 0 0 0 ( 24) SER437 3 0 0 0 0 0 0 0 0 0 ( 30) ARG443 29 0 0 0 0 0 0 0 0 0 ( 37) HIS450 2 0 0 0 0 0 0 0 0 0 ( 39) ARG452 0 1 2 0 0 0 0 0 0 0 chainE prot.sequence PSnhygpipgipvgtmwrfrvqvSesgvhRphvagiHgRsndgayslvlaggyeddvdhgnfftytgsggqscdqkltntnralalncfapindqegaeakdwrsgkpvrvvrnvkggknskyapaegnrydgiykvvkywpekgksgflvwryllrrdddepgpwtkegkdrikklgltmqypegy/PSnhygpipgipvgtmwrfrvqvSesgvhRphvagiHgRsndgayslvlaggyeddvdhgnfftytgsgeqscdqkltntnralalncfapindqegaeakdwrsgkpvrvvrnvkggknskyapaegnrydgiykvvkywpekgksgflvwryllrrdddepgpwtkegkdrikklgltmqypegyleal/NHygpipgipvgtmwrfrvqvseSgvhrpHvagihgRsNdgayslvlaggyeddvdhgnfftytgsgcdqkltntnralalncfapindqegaeakdwrsgkpvrvvrnvkggknskyapaegnrydgiykvvkywpekgksgflvwryllrrdddepgpwtkegkdrikklgltmqypegyl >6vdd_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=POL DOMAIN OF POL1 FROM M. SMEGMATIS COMPLEX WITH DNA PRIMER-TEMPLATE AND DNTP organism=Mycolicibacterium smegmatis DNA sequence DT(C9):DA(B11) DA(C10):DT(B10) DC(C11):DG(B9) DG(C12):DC(B8) DT(C13):DA(B7) DG(C14):DC(B6) DA(C15):DT(B5) DT(C16):DA(B4) DC(C17):DG(B3) DG(C18):DC(B2) DC(C19):DG(B1) chainA (274) ARG615 0 0 3 12 5 0 0 0 0 0 0 (305) ARG646 10 3 0 0 0 0 0 0 0 0 0 (312) ASN653 0 0 1 0 0 0 0 0 0 0 0 (315) ASN656 0 0 8 3 0 0 0 0 0 0 0 (319) ARG660 0 3 0 0 0 0 0 0 0 0 0 (404) TYR745 11 0 0 0 0 0 0 0 0 0 0 (483) ASN824 1 0 0 0 0 0 0 0 0 0 0 (487) GLN828 1 0 0 0 0 0 0 0 0 0 0 prot.sequence rgralepgelaawlsehslgsrfgvavvgthkaydadatalaivaadgdgryidtstltpedeaalaswladpgppkalheaklamhdlagrgwtlrgvtsdtalaaylvrpgqrsftlddlavrylhrelravqtvilracavldladaldqelaridslsllsrmelpvqrtlaemehagiavdlgmleqlqsefadqirdaaeaaysvigkqinlgspkqlqavlfdelempktkktktgyttdadalqslfektghpflqhllahrdatRlkvtvdgllnsvasdgrihttfnqtiaatgRlsstepNlqNipiRteagrrirdafvvgegyaelmtadysqiemrimahlsrdaglieafntgedlhsfvasrafsvpidevtpelrrrvkamsyglaYglsayglaqqlkisteeakvqmeqyfdrfggvrdylrdvvdqarkdgytstvlgrrrylpeldssnrqvreaaeraalNapiQgsaadiikvaminvdqaikdaglrsrillqvHdellfevsegeqgeleqlvrehmgnaypldvplevsvgygrswdaaah >6vdk_A:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=CRYOEM STRUCTURE OF HIV-1 CONSERVED INTASOME CORE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DA(H-3):DT(G41) DG(H-2):DC(G40) DC(H-1):DG(G39) DG(H0):DC(G38) DT(H1):DA(G37) DG(H2):DC(G36) DG(H3):DC(G35) DG(H4):DC(G34) DC(H5):DG(G33) DG(H6):DC(G32) DG(H7):DC(G31) DG(H8):DC(G30) DA(H9):DT(G29) DA(H10):DT(G28) DA(H11):DT(G27) DA(H12):DT(G26) DT(H13):DA(G25) DC(H14):DG(G24) DT(H15):DA(G23) DC(H16):DG(G22) DT(H17):DA(G21) DA(H18):DT(G20) DG(H19):DC(G19) DC(H20):DG(G18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiird >6vdk_AJP:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=CRYOEM STRUCTURE OF HIV-1 CONSERVED INTASOME CORE organism=? DNA sequence DG(G18):DC(H20) DC(G19):DG(H19) DT(G20):DA(H18) DA(G21):DT(H17) DG(G22):DC(H16) DA(G23):DT(H15) DG(G24):DC(H14) DA(G25):DT(H13) DT(G26):DA(H12) DT(G27):DA(H11) DT(G28):DA(H10) DT(G29):DA(H9) DC(G30):DG(H8) DC(G31):DG(H7) DC(G32):DG(H6) DG(G33):DC(H5) DC(G34):DG(H4) DC(G35):DG(H3) DC(G36):DG(H2) DA(G37):DT(H1) DC(G38):DG(H0) DG(G39):DC(H-1) DC(G40):DG(H-2) DT(G41):DA(H-3) chainA ( 51) HIS51 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ chainP prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiird/qnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiirdYgkqma/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >6vdk_CIM:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=CRYOEM STRUCTURE OF HIV-1 CONSERVED INTASOME CORE organism=HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DA(F-3):DT(E41) DG(F-2):DC(E40) DC(F-1):DG(E39) DG(F0):DC(E38) DT(F1):DA(E37) DG(F2):DC(E36) DG(F3):DC(E35) DG(F4):DC(E34) DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainC ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 chainI chainM prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiird/qnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiirdYgkqma/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakiird >6ven_ABCDEFGH: title=YEAST COMPASS IN COMPLEX WITH A UBIQUITINATED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) chainA ( 10) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence artqtarphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavalqeaseaylvalfedtnlcaihakrvtipkdiqlarrirgera/lrdniqgitKpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytEhakrktvtamdvvyalkrqgrtlygfgg/ktrssraglQfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelaGnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcyts/phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavalqeaseaylvalfedtnlcaihakrvtipkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/kaktrssraglqfpvgrvhrllrkGnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa >6vg2_D:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF HUMAN TRANSCRIPTION FACTOR FLI1 IN COMPLEX WITH 16-MER DNA CAGAGGATGTGGCTTC organism=Homo sapiens DNA sequence DG(F9):DC(E16) DA(F10):DT(E15) DA(F11):DT(E14) DG(F12):DC(E13) DC(F13):DG(E12) DC(F14):DG(E11) DA(F15):DT(E10) DC(F16):DG(E9) DA(F17):DT(E8) DT(F18):DA(E7) DC(F19):DG(E6) DC(F20):DG(E5) DT(F21):DA(E4) DC(F22):DG(E3) DT(F23):DA(E2) DG(F24):DC(E1) chainD ( 56) LYS334 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 59) ARG337 0 0 0 0 0 0 0 0 0 5 19 23 0 0 0 0 ( 62) ARG340 0 0 0 0 0 0 0 0 0 0 0 11 17 0 0 0 ( 63) TYR341 0 0 0 0 0 0 0 6 5 4 0 0 0 0 0 0 prot.sequence gqiqlwqfllellsdsanascitwegtngefkmtdpdevarrwgerkskpnmnydKlsRalRYyydknimtkvhgkryaykfdfhgiaqalq >6vg6_D:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF DPO4 WITH 8-OXOADENINE (OXOA) AND DGTP* organism=Saccharolobus solfataricus DNA sequence DG(C6):DC(B13) DA(C7):DT(B12) DA(C8):DT(B11) DT(C9):DA(B10) DC(C10):DG(B9) DC(C11):DG(B8) DT(C12):DA(B7) DT(C13):DA(B6) DC(C14):DG(B5) DC(C15):DG(B4) DC(C16):DG(B3) DC(C17):DG(B2) DC(C18):DG(B1) chainD (332) ARG332 7 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 5 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >6vg8_AD:"Winged_helix"_DNA-binding_domain;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAINS OF HUMAN FLI1 AND RUNX2 IN COMPLEX WITH 16-MER DNA CAGAGGATGTGGCTTC organism=HOMO SAPIENS DNA sequence DG(C2):DC(B16) DA(C3):DT(B15) DA(C4):DT(B14) DG(C5):DC(B13) DC(C6):DG(B12) DC(C7):DG(B11) DA(C8):DT(B10) DC(C9):DG(B9) DA(C10):DT(B8) DT(C11):DA(B7) DC(C12):DG(B6) DC(C13):DG(B5) DT(C14):DA(B4) DC(C15):DG(B3) DT(C16):DA(B2) DG(C17):DC(B1) chainA ( 60) LYS334 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 63) ARG337 0 0 0 0 0 0 0 0 0 10 13 22 0 0 0 0 ( 66) ARG340 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 ( 67) TYR341 0 0 0 0 0 0 0 3 5 4 0 0 0 0 0 0 chainD ( 21) ARG131 0 0 0 0 0 0 4 9 7 0 0 0 0 0 0 0 ( 83) ARG193 2 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) VAL221 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 (112) ASP222 0 0 0 2 9 2 0 0 0 0 0 0 0 0 0 0 (115) ARG225 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 (118) ARG228 0 0 0 1 13 4 0 0 0 0 0 0 0 0 0 0 prot.sequence mpgsgqiqlwqfllellsdsanascitwegtngefkmtdpdevarrwgerkskpnmnydKlsRalRYyydknimtkvhgkryaykfdfhgiaqalq/aelvrtdspnflcsvlpshwRcnktlpvafkvvalgevpdgtvvtvmagndenysaelrnasavmknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikvtVDgpRepRrh >6vg8_D:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAINS OF HUMAN FLI1 AND RUNX2 IN COMPLEX WITH 16-MER DNA CAGAGGATGTGGCTTC organism=HOMO SAPIENS DNA sequence DG(C2):DC(B16) DA(C3):DT(B15) DA(C4):DT(B14) DG(C5):DC(B13) DC(C6):DG(B12) DC(C7):DG(B11) DA(C8):DT(B10) DC(C9):DG(B9) DA(C10):DT(B8) DT(C11):DA(B7) DC(C12):DG(B6) DC(C13):DG(B5) DT(C14):DA(B4) DC(C15):DG(B3) DT(C16):DA(B2) DG(C17):DC(B1) chainD ( 21) ARG131 0 0 0 0 0 0 4 9 7 0 0 0 0 0 0 0 ( 83) ARG193 2 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) VAL221 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 (112) ASP222 0 0 0 2 9 2 0 0 0 0 0 0 0 0 0 0 (115) ARG225 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 (118) ARG228 0 0 0 1 13 4 0 0 0 0 0 0 0 0 0 0 prot.sequence aelvrtdspnflcsvlpshwRcnktlpvafkvvalgevpdgtvvtvmagndenysaelrnasavmknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikvtVDgpRepRrh >6vgd_AD:"Winged_helix"_DNA-binding_domain;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN (DBD) OF HUMAN FLI1 AND THE COMPLEX OF THE DBD OF HUMAN RUNX2 WITH CORE BINDING FACTOR BETA (CBFB), IN COMPLEX WITH 16MER DNA CAGAGGATGTGGCTTC organism=HOMO SAPIENS DNA sequence DC(B1):DG(C17) DA(B2):DT(C16) DG(B3):DC(C15) DA(B4):DT(C14) DG(B5):DC(C13) DG(B6):DC(C12) DT(B8):DA(C10) DG(B9):DC(C9) DT(B10):DA(C8) DG(B11):DC(C7) DG(B12):DC(C6) DC(B13):DG(C5) DT(B14):DA(C4) DT(B15):DA(C3) DC(B16):DG(C2) chainA ( 63) ARG337 0 0 0 0 22 13 0 0 0 0 0 0 0 0 0 ( 66) ARG340 0 0 1 13 2 0 0 0 0 0 0 0 0 0 0 ( 67) TYR341 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 chainD ( 21) ARG131 0 0 0 0 0 0 4 13 6 0 0 0 0 0 0 ( 83) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 5 9 3 (111) VAL221 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 (112) ASP222 0 0 0 0 0 0 0 0 0 4 9 2 0 0 0 (115) ARG225 0 0 0 0 0 0 0 0 10 2 2 0 0 0 0 prot.sequence mpgsgqiqlwqfllellsdsanascitwegtngefkmtdpdevarrwgerkskpnmnydklsRalRYyydknimtkvhgkryaykfdfhgiaqalqph/aelvrtdspnflcsvlpshwRcnktlpvafkvvalgevpdgtvvtvmagndenysaelrnasavmknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikvtVDgpRep >6vgd_D:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN (DBD) OF HUMAN FLI1 AND THE COMPLEX OF THE DBD OF HUMAN RUNX2 WITH CORE BINDING FACTOR BETA (CBFB), IN COMPLEX WITH 16MER DNA CAGAGGATGTGGCTTC organism=HOMO SAPIENS DNA sequence DG(C2):DC(B16) DA(C3):DT(B15) DA(C4):DT(B14) DG(C5):DC(B13) DC(C6):DG(B12) DC(C7):DG(B11) DA(C8):DT(B10) DC(C9):DG(B9) DA(C10):DT(B8) DC(C12):DG(B6) DC(C13):DG(B5) DT(C14):DA(B4) DC(C15):DG(B3) DT(C16):DA(B2) DG(C17):DC(B1) chainD ( 21) ARG131 0 0 0 0 0 0 6 13 4 0 0 0 0 0 0 ( 83) ARG193 3 9 5 0 0 0 0 0 0 0 0 0 0 0 0 (111) VAL221 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 (112) ASP222 0 0 0 2 9 4 0 0 0 0 0 0 0 0 0 (115) ARG225 0 0 0 0 2 2 10 0 0 0 0 0 0 0 0 prot.sequence aelvrtdspnflcsvlpshwRcnktlpvafkvvalgevpdgtvvtvmagndenysaelrnasavmknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikvtVDgpRep >6vge_AD:"Winged_helix"_DNA-binding_domain;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAINS OF HUMAN TRANSCRIPTION FACTOR ERG, HUMAN RUNX2 BOUND TO CORE BINDING FACTOR BETA (CBFB), IN COMPLEX WITH 16MER DNA CAGAGGATGTGGCTTC organism=HOMO SAPIENS DNA sequence DC(B1):DG(C17) DA(B2):DT(C16) DG(B3):DC(C15) DA(B4):DT(C14) DG(B5):DC(C13) DG(B6):DC(C12) DA(B7):DT(C11) DT(B8):DA(C10) DG(B9):DC(C9) DT(B10):DA(C8) DG(B11):DC(C7) DG(B12):DC(C6) DC(B13):DG(C5) DT(B14):DA(C4) DT(B15):DA(C3) DC(B16):DG(C2) chainA ( 60) LYS364 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 63) ARG367 0 0 0 0 22 13 8 0 0 0 0 0 0 0 0 0 ( 66) ARG370 0 0 1 13 2 0 0 0 0 0 0 0 0 0 0 0 ( 67) TYR371 0 0 0 0 0 0 3 5 8 0 0 0 0 0 0 0 chainD ( 21) ARG131 0 0 0 0 0 0 0 4 13 6 0 0 0 0 0 0 ( 83) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 3 (111) VAL221 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 (112) ASP222 0 0 0 0 0 0 0 0 0 0 3 9 2 0 0 0 (115) ARG225 0 0 0 0 0 0 0 0 0 8 2 2 0 0 0 0 prot.sequence mpgsgqiqlwqfllellsdssnsscitwegtngefkmtdpdevarrwgerkskpnmnydKlsRalRYyydknimtkvhgkryaykfdfhgiaqalqph/aelvrtdspnflcsvlpshwRcnktlpvafkvvalgevpdgtvvtvmagndenysaelrnasavmknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikvtVDgpRep >6vge_D:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAINS OF HUMAN TRANSCRIPTION FACTOR ERG, HUMAN RUNX2 BOUND TO CORE BINDING FACTOR BETA (CBFB), IN COMPLEX WITH 16MER DNA CAGAGGATGTGGCTTC organism=? DNA sequence DC(B1):DG(C17) DA(B2):DT(C16) DG(B3):DC(C15) DA(B4):DT(C14) DG(B5):DC(C13) DG(B6):DC(C12) DA(B7):DT(C11) DT(B8):DA(C10) DG(B9):DC(C9) DT(B10):DA(C8) DG(B11):DC(C7) DG(B12):DC(C6) DC(B13):DG(C5) DT(B14):DA(C4) DT(B15):DA(C3) DC(B16):DG(C2) chainD ( 21) ARG131 0 0 0 0 0 0 0 4 13 6 0 0 0 0 0 0 ( 83) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 3 (111) VAL221 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 (112) ASP222 0 0 0 0 0 0 0 0 0 0 3 9 2 0 0 0 (115) ARG225 0 0 0 0 0 0 0 0 0 8 2 2 0 0 0 0 prot.sequence aelvrtdspnflcsvlpshwRcnktlpvafkvvalgevpdgtvvtvmagndenysaelrnasavmknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikvtVDgpRep >6vgg_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAINS OF HUMAN TRANSCRIPTION FACTOR ERG, HUMAN RUNX2 BOUND TO CORE BINDING FACTOR BETA (CBFB), AND MITHRAMYCIN, IN COMPLEX WITH 16MER DNA CAGAGGATGTGGCTTC organism=HOMO SAPIENS DNA sequence DC(B1):DG(C17) DA(B2):DT(C16) DG(B3):DC(C15) DA(B4):DT(C14) DG(B5):DC(C13) DG(B6):DC(C12) DA(B7):DT(C11) DT(B8):DA(C10) DG(B9):DC(C9) DT(B10):DA(C8) DG(B11):DC(C7) DG(B12):DC(C6) DC(B13):DG(C5) DT(B14):DA(C4) DT(B15):DA(C3) DC(B16):DG(C2) chainA ( 60) LYS364 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 63) ARG367 0 0 0 0 22 14 6 0 0 0 0 0 0 0 0 0 ( 66) ARG370 0 0 4 11 2 0 0 0 0 0 0 0 0 0 0 0 ( 67) TYR371 0 0 0 0 0 0 3 5 3 0 0 0 0 0 0 0 prot.sequence mpgsgqiqlwqfllellsdssnsscitwegtngefkmtdpdevarrwgerkskpnmnydKlsRalRYyydknimtkvhgkryaykfdfhgiaqalqph >6vgg_AD:"Winged_helix"_DNA-binding_domain;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAINS OF HUMAN TRANSCRIPTION FACTOR ERG, HUMAN RUNX2 BOUND TO CORE BINDING FACTOR BETA (CBFB), AND MITHRAMYCIN, IN COMPLEX WITH 16MER DNA CAGAGGATGTGGCTTC organism=HOMO SAPIENS DNA sequence DG(C2):DC(B16) DA(C3):DT(B15) DA(C4):DT(B14) DG(C5):DC(B13) DC(C6):DG(B12) DC(C7):DG(B11) DA(C8):DT(B10) DC(C9):DG(B9) DA(C10):DT(B8) DT(C11):DA(B7) DC(C12):DG(B6) DC(C13):DG(B5) DT(C14):DA(B4) DC(C15):DG(B3) DT(C16):DA(B2) DG(C17):DC(B1) chainA ( 60) LYS364 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 63) ARG367 0 0 0 0 0 0 0 0 0 6 14 22 0 0 0 0 ( 66) ARG370 0 0 0 0 0 0 0 0 0 0 0 2 11 4 0 0 ( 67) TYR371 0 0 0 0 0 0 0 3 5 3 0 0 0 0 0 0 chainD ( 21) ARG131 0 0 0 0 0 0 5 13 5 0 0 0 0 0 0 0 ( 83) ARG193 3 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) VAL221 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 (112) ASP222 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 (115) ARG225 0 0 0 0 2 3 7 0 0 0 0 0 0 0 0 0 prot.sequence mpgsgqiqlwqfllellsdssnsscitwegtngefkmtdpdevarrwgerkskpnmnydKlsRalRYyydknimtkvhgkryaykfdfhgiaqalqph/aelvrtdspnflcsvlpshwRcnktlpvafkvvalgevpdgtvvtvmagndenysaelrnasavmknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikvtVDgpRep >6vgm_D:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF DPO4 WITH 8-OXOADENINE (OXOA) AND DTTP* organism=Saccharolobus solfataricus DNA sequence DG(C6):DC(B13) DA(C7):DT(B12) DA(C8):DT(B11) DT(C9):DA(B10) DC(C10):DG(B9) DC(C11):DG(B8) DT(C12):DA(B7) DT(C13):DA(B6) DC(C14):DG(B5) DC(C15):DG(B4) DC(C16):DG(B3) DC(C17):DG(B2) DC(C18):DG(B1) chainD (244) SER244 0 0 0 1 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 7 1 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrkSigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >6vjw_A:DNA-glycosylase; title=CRYSTAL STRUCTURE OF WT HMBD4 COMPLEXED WITH T:G MISMATCH DNA organism=Homo sapiens DNA sequence DC(C1):DG(D12) DC(C2):DG(D11) DA(C3):DT(D10) DG(C4):DC(D9) DC(C5):DG(D8) DG(C6):DC(D7) ORP(C7):DG(D6) DG(C8):DC(D5) DC(C9):DG(D4) DA(C10):DT(D3) DG(C11):DC(D2) DC(C12):DG(D1) chainA ( 29) LEU466 0 0 0 0 0 0 7 0 0 0 0 0 ( 30) ASN467 0 0 0 0 0 0 0 2 0 0 0 0 ( 31) ARG468 0 0 0 0 0 14 6 21 0 0 0 0 ( 32) THR469 0 0 0 0 0 0 2 0 0 0 0 0 ( 71) LEU508 0 0 0 0 0 0 26 4 0 0 0 0 ( 74) LEU511 0 0 0 0 0 0 0 2 1 0 0 0 (103) TYR540 0 0 0 0 0 0 15 0 0 0 0 0 (123) ASP560 0 0 0 0 0 0 12 0 0 0 0 0 (125) LYS562 0 0 0 0 0 0 14 0 0 0 0 0 prot.sequence wtpprspfnlvqetlfhdpwklliatiflNRTSgkmaipvlwkflekypsaevartadwrdvsellkplgLydLraktivkfsdeyltkqwkypielhgigkygndsyrifcvnewkqvhpedhklnkyhdwlwenhe >6vkp_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF DPO4 EXTENSION PAST 8-OXOADENINE (OXOA) AND DG organism=Saccharolobus solfataricus DNA sequence DT(T5):DG(P13) DG(T7):DC(P12) DA(T8):DT(P11) DA(T9):DT(P10) DT(T10):DA(P9) DC(T11):DG(P8) DT(T12):DA(P7) DT(T13):DA(P6) DT(T14):DA(P5) DC(T15):DG(P4) DC(T16):DG(P3) DC(T17):DG(P2) DC(T18):DG(P1) DC(T19):DG(P0) chainA ( 32) VAL32 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA42 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) PRO184 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvPgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvRfskfi >6vnp_D:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF DPO4 EXTENSION PAST 8-OXOADENINE (OXOA) AND DT organism=Saccharolobus solfataricus DNA sequence DG(B0):DC(C19) DG(B1):DC(C18) DG(B2):DC(C17) DG(B3):DC(C16) DG(B4):DC(C15) DA(B5):DT(C14) DA(B6):DT(C13) DG(B7):DC(C12) DG(B8):DC(C11) DA(B9):DT(C10) DT(B10):DA(C9) DT(B11):DA(C8) DC(B12):DG(C7) DT(B13):DT(C5) chainD ( 32) VAL32 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 42) ALA42 0 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcVfsgrfedsgAvatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirrigvrfskfi >6voy_AD:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=CRYO-EM STRUCTURE OF HTLV-1 INSTASOME organism=? DNA sequence DG(M4):DC(L22) DT(M5):DA(L21) DG(M6):DC(L20) DT(M7):DA(L19) DA(M8):DT(L18) DC(M9):DG(L17) DT(M10):DA(L16) DA(M11):DT(L15) DA(M12):DT(L14) DA(M13):DT(L13) DT(M14):DA(L12) DT(M15):DA(L11) DT(M16):DA(L10) DC(M17):DG(L9) DT(M18):DA(L8) DC(M19):DG(L7) DT(M20):DA(L6) DC(M21):DG(L5) DC(M22):DG(L4) DT(M23):DA(L3) DG(M24):DC(L2) DG(M25):DC(L1) chainA (157) GLN156 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) ARG157 2 5 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence pspaelhsfthcgqtaltlqgattteasnilrschacrknnpqhqmprghirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgaisatqkrketsseaissllqaiaylgkpsyintdngpayisqdflnmctslairhtthvpynptssglvQRsngilktllykyftdkpdlpmdnalsialwtinhlnvltnchktrwqlhhsprlqpipetrslsnkqthwyyfklpglnsrqwkgpqealqeaagaalipvsassaqwipwrllkraa/spaelhsfthcgqtaltlqgattteasnilrschacrgllpnhiwqgdithfkykntlyrlhvwvdtfsgaisatqkrketsseaissllqaiaylgkpsyintdngpayisqdflnmctslairhtthvpynptssglvqrsngilktllykyftDKpdlpmdnalsialwtinhlnvltnchktrwqlhhsprlqpipetrslsnkqthwyyfklpglnsrqwkgpqealqeaagaalipvsassaqwipwrllkra >6voy_BC:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=CRYO-EM STRUCTURE OF HTLV-1 INSTASOME organism=? DNA sequence DC(I1):DG(J25) DC(I2):DG(J24) DA(I3):DT(J23) DG(I4):DC(J22) DG(I5):DC(J21) DA(I6):DT(J20) DG(I7):DC(J19) DA(I8):DT(J18) DG(I9):DC(J17) DA(I10):DT(J16) DA(I11):DT(J15) DA(I12):DT(J14) DT(I13):DA(J13) DT(I14):DA(J12) DT(I15):DA(J11) DA(I16):DT(J10) DG(I17):DC(J9) DT(I18):DA(J8) DA(I19):DT(J7) DC(I20):DG(J6) DA(I21):DT(J5) DC(I22):DG(J4) chainB chainC (157) GLN156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (158) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 prot.sequence spaelhsfthcgqtaltlqgattteasnilrschacrgllpnhiwqgdithfkykntlyrlhvwvdtfsgaisatqkrketsseaissllqaiaylgkpsyintdngpayisqdflnmctslairhtthvpynptssglvqrsngilktllykyftdkpdlpmdnalsialwtinhlnvltnchktrwqlhhsprlqpipetrslsnkqthwyyfklpglnsrqwkgpqealqeaagaalipvsassaqwipwrllkra/pspaelhsfthcgqtaltlqgattteasnilrschacrknnpqhqmprghirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgaisatqkrketsseaissllqaiaylgkpsyintdngpayisqdflnmctslairhtthvpynptssglvQRsngilktllykyftdkpdlpmdnalsialwtinhlnvltnchktrwqlhhsprlqpipetrslsnkqthwyyfklpglnsrqwkgpqealqeaagaalipvsassaqwipwrllkraa >6voy_C:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=CRYO-EM STRUCTURE OF HTLV-1 INSTASOME organism=? DNA sequence DA(J1):DA(I25) DC(J2):DG(I24) DT(J3):DA(I23) DG(J4):DC(I22) DT(J5):DA(I21) DG(J6):DC(I20) DT(J7):DA(I19) DA(J8):DT(I18) DC(J9):DG(I17) DT(J10):DA(I16) DA(J11):DT(I15) DA(J12):DT(I14) DA(J13):DT(I13) DT(J14):DA(I12) DT(J15):DA(I11) DT(J16):DA(I10) DC(J17):DG(I9) DT(J18):DA(I8) DC(J19):DG(I7) DT(J20):DA(I6) DC(J21):DG(I5) DC(J22):DG(I4) DT(J23):DA(I3) DG(J24):DC(I2) DG(J25):DC(I1) chainC ( 51) ILE50 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG52 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) PRO149 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) THR150 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) GLN156 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) ARG157 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ARG218 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) LEU220 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) LYS223 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) TRP265 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pspaelhsfthcgqtaltlqgattteasnilrschacrknnpqhqmprghIrRgllpnhiwqgdithfkykntlyrlhvwvdtfsgaisatqkrketsseaissllqaiaylgkpsyintdngpayisqdflnmctslairhtthvpynPTssglvQRsngilktllykyftdkpdlpmdnalsialwtinhlnvltnchktrwqlhhsprlqpipetRsLsnKqthwyyfklpglnsrqwkgpqealqeaagaalipvsassaqWipwrllkraa >6vpc_F:Cytidine_deaminase-like; title=STRUCTURE OF THE SPCAS9 DNA ADENINE BASE EDITOR - ABE8E organism=ESCHERICHIA COLI DNA sequence DC(D11) DT(D12) DC(D13) DC(D14) DG(D15) DA(D16) DC(D17) DC(D18) DG(D19) DT(D20) DG(D21) DT(D22) DT(D23) DC(D24) DC(D25) DC(D27) DT(D28) DT(D29) DT(D30) DC(D31) DG(D39) DA(D40) DG(D41) DG(D42) DG(D43) DC(D44) DG(D45) DA(D46) DT(D47) DT(D48) DA(D49) DG(D50) chainF (104) ASN108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) LYS110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) PHE148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) TYR149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ARG153 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) GLN154 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efsheywmrhaltlakrarderevpvgavlvlnnrvigegwnraiglhdptahaeimalrqgglvmqnyrlidatlyvtfepcvmcagamihsrigrvvfgvrNsKrgaagslmnvlnypgmnhrveitegiladecaallcdFYrmpRQvfnaqk >6vtx_A:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF HUMAN KLF4 ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH NANOG DNA organism=Homo sapiens DNA sequence DA(B1):DT(C12) DG(B2):DC(C11) DG(B3):DC(C10) DG(B4):DC(C9) DG(B5):DC(C8) DG(B6):DC(C7) DT(B7):DA(C6) DG(B8):DC(C5) DT(B9):DA(C4) DG(B10):DC(C3) DC(B11):DG(C2) DC(B12):DG(C1) chainA ( 16) SER445 0 0 0 0 0 0 0 0 0 0 0 5 ( 17) HIS446 0 0 0 0 0 0 0 0 5 9 3 0 ( 44) ARG473 0 0 0 0 0 0 17 14 6 0 0 0 ( 46) ASP475 0 0 0 0 0 0 1 0 5 4 0 0 ( 47) GLU476 0 0 0 0 0 1 4 0 0 0 0 0 ( 50) ARG479 0 0 0 0 8 11 2 0 0 0 0 0 ( 72) ARG501 0 0 0 12 12 2 0 0 0 0 0 0 ( 74) ASP503 0 0 0 0 2 8 0 0 0 0 0 0 ( 75) HIS504 0 0 11 10 0 0 0 0 0 0 0 0 prot.sequence htcdyagcgktytksSHlkahlrthtgekpyhcdwdgcgwkfaRsDEltRhyrkhtghrpfqcqkcdrafsRsDHlalhmkrh >6vu3_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A (TTC-A) CONTAINING MRNA WITH A 12 NT LONG SPACER organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 27 14 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6vu3_ABE:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A (TTC-A) CONTAINING MRNA WITH A 12 NT LONG SPACER organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vug_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=DIABODY BOUND TO A REVERSE TRANSCRIPTASE APTAMER COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 / HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 81) GLU89 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) GLN91 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ILE94 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 (107) TYR115 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) PRO157 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) TYR183 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 (167) MET184 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (455) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainB prot.sequence ispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskinpyntpvfaikkkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftiiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklv/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwePhpaglkkkksvtvldvgdayFsvpldedfrkytaftipsinnetpgiryqynvLpqgwkgspaifqssmtkilepfkkqNPdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvnDiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6vvs_FT:C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=CRYSTAL STRUCTURE OF A MYCOBACTERIUM SMEGMATIS RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH ANTIBIOTIC SORANGICIN organism=? DNA sequence DG(O1):DC(P26) DC(O2):DG(P25) DT(O3):DA(P24) DT(O4):DA(P23) DG(O5):DC(P22) DA(O6):DT(P21) DC(O7):DG(P20) DA(O8):DT(P19) DA(O9):DT(P18) DA(O10):DT(P17) DA(O11):DT(P16) DG(O12):DC(P15) DT(O13):DA(P14) DG(O14):DC(P13) DT(O15):DA(P12) DT(O16):DA(P11) DA(O17):DT(P10) DA(O18):DT(P9) DA(O19):DT(P8) DT(O20):DA(P7) DT(O21):DA(P6) DG(O22):DC(P5) DT(O23):DA(P4) DG(O24):DC(P3) DC(O25):DG(P2) DT(O26):DA(P1) chainF (126) TRP287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 (127) TRP288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 (130) GLN291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 (133) THR294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (134) ARG295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 12 7 0 (147) VAL308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 (148) HIS309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 (151) GLU312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 (276) THR437 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) ARG438 0 0 0 0 0 5 18 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) GLU439 0 0 1 4 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) ARG440 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ARG442 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) GLN443 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT ( 9) ARG259 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sadsvraylkqigkvallnaeeevelakrieaglyatqklaelaekgeklpvqqrrdmqwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatWWirQaiTRamadqartiripVHmvEvinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvletlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyld/iddldltvRsynclkregvhtvgelvartesdlldirnfgqksidevkiklhq >6vvv_FT:C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=CRYSTAL STRUCTURE OF A MYCOBACTERIUM SMEGMATIS TRANSCRIPTION INITIATION COMPLEX WITH RIFAMPICIN-RESISTANT RNA POLYMERASE organism=? DNA sequence DA(P1):DT(O26) DG(P2):DC(O25) DC(P3):DG(O24) DA(P4):DT(O23) DC(P5):DG(O22) DA(P6):DT(O21) DA(P7):DT(O20) DT(P8):DA(O19) DT(P9):DA(O18) DT(P10):DA(O17) DA(P11):DT(O16) DA(P12):DT(O15) DC(P13):DG(O14) DA(P14):DT(O13) DC(P15):DG(O12) DT(P16):DA(O11) DT(P17):DA(O10) DT(P18):DA(O9) DT(P19):DA(O8) DG(P20):DC(O7) DT(P21):DA(O6) DC(P22):DG(O5) DA(P23):DT(O4) DA(P24):DT(O3) DG(P25):DC(O2) DC(P26):DG(O1) chainF (125) TRP287 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) TRP288 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) GLN291 11 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) THR294 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) ARG295 0 7 15 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) VAL308 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) HIS309 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) GLU312 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) LEU427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (275) THR437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (276) ARG438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 16 5 0 0 0 0 0 (277) GLU439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 7 3 0 0 (278) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 (280) ARG442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 (281) GLN443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 chainT ( 9) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 prot.sequence adsvraylkqigkvallnaeeevelakrieaglyatqklaelaekgeklpvqqrrdmqwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatWWirQaiTRamadqartiripVHmvEvinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvletlsereagvvrlrfgltdgqprtLdeigqvygvTRERiRQiesktmsklrhpsrsqvlrdy/iddldltvRsynclkregvhtvgelvartesdlldirnfgqksidevkiklhq >6vvx_CDFM: title=MYCOBACTERIUM TUBERCULOSIS WT RNAP TRANSCRIPTION INITIATION INTERMEDIATE STRUCTURE WITH SORANGICIN organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DC(O14):DG(P141) DG(O15):DC(P140) DA(O16):DT(P139) DA(O17):DT(P138) DC(O18):DG(P137) DC(O19):DG(P136) DT(O20):DA(P135) DG(O21):DC(P134) DG(O22):DC(P133) DT(O23):DA(P132) DC(O24):DG(P131) DT(O25):DA(P130) DT(O26):DA(P129) DG(O27):DC(P128) DA(O28):DT(P127) DC(O29):DG(P126) DT(O30):DA(P125) DC(O31):DG(P124) DC(O32):DG(P123) DA(O33):DT(P122) DT(O34):DA(P121) DT(O35):DA(P120) DG(O36):DC(P119) DC(O37):DG(P118) DC(O38):DG(P117) DG(O39):DC(P116) DG(O40):DC(P115) DA(O41):DT(P114) DT(O42):DA(P113) DT(O43):DA(P112) DT(O44):DA(P111) DG(O45):DC(P110) DT(O46):DA(P109) DA(O47):DT(P108) DT(O48):DA(P107) DT(O49):DA(P106) DA(O50):DT(P105) DG(O51):DC(P104) DA(O52):DT(P103) DC(O53):DG(P102) DG(O56):DC(P99) DC(O57):DG(P98) DA(O58):DT(P97) DG(O59):DC(P96) DG(O60):DC(P95) DG(O61):DC(P94) DT(O62):DA(P93) DT(O63):DA(P92) DG(O64):DC(P91) DC(O65):DG(P90) DC(O66):DG(P89) DC(O67):DG(P88) DC(O68):DG(P87) DG(O69):DC(P86) DA(O70):DT(P85) DA(O71):DT(P84) DG(O72):DC(P83) DC(O73):DG(P82) DG(O74):DC(P81) DG(O75):DC(P80) DG(O76):DC(P79) DC(O77):DG(P78) DG(O78):DC(P77) chainC (369) ARG398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) VAL399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (391) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (398) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 18) ASP226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) PHE335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ASP336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) SER344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) THR345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) TYR346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) THR348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) TRP349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) TRP350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) GLN353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ARG357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) VAL370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) HIS371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ARG384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) THR499 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 17 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) GLU501 0 0 0 0 0 0 0 0 0 0 0 0 6 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) ARG502 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN505 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 84) TRP85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) SER86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmeRVvrERmttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreraglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlss/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvtgpgNrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmtgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/sealrqarkdaeltasaDsVRaylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekFDytKgYkfSTYaTWWiRQaitRamadqartiripVHmvEvinklgRiqRellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyl/ifkvgdtvvyphhgaalveaietrtikgeqkeylvlkvaqgdltvrvpaenaeyvgvrdvvgqegldkvfqvlraphteeptnWSrrykanleklasgdvnkvaevvrdlwrrdqerglsagekrmlakarqilvgelalaestddakaetildevlaa >6vvy_CDFJM: title=MYCOBACTERIUM TUBERCULOSIS WT RNAP TRANSCRIPTION OPEN PROMOTER COMPLEX WITH SORANGICIN organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DC(O14):DG(P141) DG(O15):DC(P140) DA(O16):DT(P139) DA(O17):DT(P138) DC(O18):DG(P137) DC(O19):DG(P136) DT(O20):DA(P135) DG(O21):DC(P134) DG(O22):DC(P133) DT(O23):DA(P132) DC(O24):DG(P131) DT(O25):DA(P130) DT(O26):DA(P129) DG(O27):DC(P128) DA(O28):DT(P127) DC(O29):DG(P126) DT(O30):DA(P125) DC(O31):DG(P124) DC(O32):DG(P123) DA(O33):DT(P122) DT(O34):DA(P121) DT(O35):DA(P120) DG(O36):DC(P119) DC(O37):DG(P118) DC(O38):DG(P117) DG(O39):DC(P116) DG(O40):DC(P115) DA(O41):DT(P114) DT(O42):DA(P113) DT(O43):DA(P112) DT(O44):DA(P111) DG(O45):DC(P110) DT(O46):DA(P109) DA(O47):DT(P108) DT(O48):DA(P107) DT(O49):DA(P106) DA(O50):DT(P105) DG(O51):DC(P104) DA(O52):DT(P103) DC(O53):DG(P102) DT(O54):DA(P101) DG(O55):DC(P100) DG(O56):DC(P99) DC(O57):DG(P98) DA(O58):DT(P97) DG(O59):DC(P96) DG(O60):DC(P95) DG(O61):DC(P94) DT(O62):DA(P93) DT(O63):DA(P92) DG(O64):DC(P91) DC(O65):DG(P90) DC(O66):DG(P89) DC(O67):DG(P88) DC(O68):DG(P87) DG(O69):DC(P86) DA(O70):DT(P85) DA(O71):DT(P84) DG(O72):DC(P83) DC(O73):DG(P82) DG(O74):DC(P81) DG(O75):DC(P80) DG(O76):DC(P79) DC(O77):DG(P78) chainC (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (390) ASN419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (435) SER464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1033) GLN1062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (332) LEU330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) PRO394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (504) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (869) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (870) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ASP226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) VAL228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LEU240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ASN299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) LEU302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) ARG313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) PHE317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ASP336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) SER344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) THR345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) TYR346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) THR348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) TRP349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) TRP350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) ARG357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) VAL370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) HIS371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ASN377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ARG381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ARG384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) ILE421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) GLN425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ILE427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ASP429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) GLU430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) ASP432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) SER433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) PHE438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) THR499 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) GLU501 0 0 0 0 0 0 0 0 0 0 0 7 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) ARG502 0 0 0 0 0 0 0 0 0 6 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) GLN505 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 3) VAL5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) LEU6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 84) TRP85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) SER86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekRydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtliNiRpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpggLSreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaQfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlss/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLdggRfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvtgPgnRplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrtditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/edesealrqarkdaeltasaDsVRayLkqigkvaLlnaeeEvelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleaNlRLvvslakrytgRgmaFldliqegnlgliravekFDytKgYkfSTYaTWWiRQaitRamadqartiripVHmvEviNklgRiqRellqdlgreptpeelakemditpekvleiqqyarEpISldQtIgDEgDSqlgdFiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyl/drVLrgsrlgavsyetdrnhdlaprqiaryrtdngeefevpfaddaeipgtwlcrngmegtliegdlpepkkvkpprthwdmllerrsieeleellkerlelirsrrrg/ifkvgdtvvyphhgaalveaietrtikgeqkeylvlkvaqgdltvrvpaenaeyvgvrdvvgqegldkvfqvlraphteeptnWSrryKanleklasgdvnkvaevvrdlwrrdqerglsagekrmlakarqilvgelalaestddakaetildevlaa >6vvy_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS WT RNAP TRANSCRIPTION OPEN PROMOTER COMPLEX WITH SORANGICIN organism=? DNA sequence DC(O14):DG(P141) DG(O15):DC(P140) DA(O16):DT(P139) DA(O17):DT(P138) DC(O18):DG(P137) DC(O19):DG(P136) DT(O20):DA(P135) DG(O21):DC(P134) DG(O22):DC(P133) DT(O23):DA(P132) DC(O24):DG(P131) DT(O25):DA(P130) DT(O26):DA(P129) DG(O27):DC(P128) DA(O28):DT(P127) DC(O29):DG(P126) DT(O30):DA(P125) DC(O31):DG(P124) DC(O32):DG(P123) DA(O33):DT(P122) DT(O34):DA(P121) DT(O35):DA(P120) DG(O36):DC(P119) DC(O37):DG(P118) DC(O38):DG(P117) DG(O39):DC(P116) DG(O40):DC(P115) DA(O41):DT(P114) DT(O42):DA(P113) DT(O43):DA(P112) DT(O44):DA(P111) DG(O45):DC(P110) DT(O46):DA(P109) DA(O47):DT(P108) DT(O48):DA(P107) DT(O49):DA(P106) DA(O50):DT(P105) DG(O51):DC(P104) DA(O52):DT(P103) DC(O53):DG(P102) DT(O54):DA(P101) DG(O55):DC(P100) DG(O56):DC(P99) DC(O57):DG(P98) DA(O58):DT(P97) DG(O59):DC(P96) DG(O60):DC(P95) DG(O61):DC(P94) DT(O62):DA(P93) DT(O63):DA(P92) DG(O64):DC(P91) DC(O65):DG(P90) DC(O66):DG(P89) DC(O67):DG(P88) DC(O68):DG(P87) DG(O69):DC(P86) DA(O70):DT(P85) DA(O71):DT(P84) DG(O72):DC(P83) DC(O73):DG(P82) DG(O74):DC(P81) DG(O75):DC(P80) DG(O76):DC(P79) DC(O77):DG(P78) chainD (332) LEU330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) PRO394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (504) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (869) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (870) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLdggRfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvtgPgnRplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrtditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa >6vvz_CDFM: title=MYCOBACTERIUM TUBERCULOSIS RNAP S456L MUTANT TRANSCRIPTION INITIATION INTERMEDIATE STRUCTURE WITH SORANGICIN organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DC(P77):DG(O78) DG(P78):DC(O77) DC(P79):DG(O76) DC(P80):DG(O75) DC(P81):DG(O74) DG(P82):DC(O73) DC(P83):DG(O72) DT(P84):DA(O71) DT(P85):DA(O70) DC(P86):DG(O69) DG(P87):DC(O68) DG(P88):DC(O67) DG(P89):DC(O66) DG(P90):DC(O65) DC(P91):DG(O64) DA(P92):DT(O63) DA(P93):DT(O62) DC(P94):DG(O61) DC(P95):DG(O60) DC(P96):DG(O59) DT(P97):DA(O58) DG(P98):DC(O57) DG(P102):DC(O53) DT(P103):DA(O52) DC(P104):DG(O51) DT(P105):DA(O50) DA(P106):DT(O49) DA(P107):DT(O48) DT(P108):DA(O47) DA(P109):DT(O46) DC(P110):DG(O45) DA(P111):DT(O44) DA(P112):DT(O43) DA(P113):DT(O42) DT(P114):DA(O41) DC(P115):DG(O40) DC(P116):DG(O39) DG(P117):DC(O38) DG(P118):DC(O37) DC(P119):DG(O36) DA(P120):DT(O35) DA(P121):DT(O34) DT(P122):DA(O33) DG(P123):DC(O32) DG(P124):DC(O31) DA(P125):DT(O30) DG(P126):DC(O29) DT(P127):DA(O28) DC(P128):DG(O27) DA(P129):DT(O26) DA(P130):DT(O25) DG(P131):DC(O24) DA(P132):DT(O23) DC(P133):DG(O22) DC(P134):DG(O21) DA(P135):DT(O20) DG(P136):DC(O19) DG(P137):DC(O18) DT(P138):DA(O17) DT(P139):DA(O16) DC(P140):DG(O15) DG(P141):DC(O14) chainC (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) VAL399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (398) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (105) ARG313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) PHE335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ASP336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) SER344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) THR345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) TYR346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) THR348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) TRP349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) TRP350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) GLN353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) THR356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ARG357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) VAL370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) HIS371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ARG384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) THR499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 (292) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 19 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) GLU501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 11 1 0 0 0 0 0 0 0 0 0 0 0 (294) ARG502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 5 0 0 0 0 0 0 0 0 0 (296) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 chainM ( 84) TRP85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) SER86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) GLU94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmerVvrERmttqdveaitpqtliniRpvvaaikeffgtsqlsqfmdqnnplsglthkrrllalgpgglsreraglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlss/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgNrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmtgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/sealrqarkdaeltasadsvraylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakrytgRgmafldliqegnlgliravekFDytKgYkfSTYaTWWiRQaiTRamadqartiripVHmvEvinklgRiqRellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyl/ifkvgdtvvyphhgaalveaietrtikgeqkeylvlkvaqgdltvrvpaenaeyvgvrdvvgqegldkvfqvlraphteeptnWSRryKanlEklasgdvnkvaevvrdlwrrdqerglsagekrmlakarqilvgelalaestddakaetildevlaa >6vvz_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS RNAP S456L MUTANT TRANSCRIPTION INITIATION INTERMEDIATE STRUCTURE WITH SORANGICIN organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DC(O14):DG(P141) DG(O15):DC(P140) DA(O16):DT(P139) DA(O17):DT(P138) DC(O18):DG(P137) DC(O19):DG(P136) DT(O20):DA(P135) DG(O21):DC(P134) DG(O22):DC(P133) DT(O23):DA(P132) DC(O24):DG(P131) DT(O25):DA(P130) DT(O26):DA(P129) DG(O27):DC(P128) DA(O28):DT(P127) DC(O29):DG(P126) DT(O30):DA(P125) DC(O31):DG(P124) DC(O32):DG(P123) DA(O33):DT(P122) DT(O34):DA(P121) DT(O35):DA(P120) DG(O36):DC(P119) DC(O37):DG(P118) DC(O38):DG(P117) DG(O39):DC(P116) DG(O40):DC(P115) DA(O41):DT(P114) DT(O42):DA(P113) DT(O43):DA(P112) DT(O44):DA(P111) DG(O45):DC(P110) DT(O46):DA(P109) DA(O47):DT(P108) DT(O48):DA(P107) DT(O49):DA(P106) DA(O50):DT(P105) DG(O51):DC(P104) DA(O52):DT(P103) DC(O53):DG(P102) DC(O57):DG(P98) DA(O58):DT(P97) DG(O59):DC(P96) DG(O60):DC(P95) DG(O61):DC(P94) DT(O62):DA(P93) DT(O63):DA(P92) DG(O64):DC(P91) DC(O65):DG(P90) DC(O66):DG(P89) DC(O67):DG(P88) DC(O68):DG(P87) DG(O69):DC(P86) DA(O70):DT(P85) DA(O71):DT(P84) DG(O72):DC(P83) DC(O73):DG(P82) DG(O74):DC(P81) DG(O75):DC(P80) DG(O76):DC(P79) DC(O77):DG(P78) DG(O78):DC(P77) chainD (398) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgNrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmtgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa >6vw0_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS RNAP S456L MUTANT OPEN PROMOTER COMPLEX organism=? DNA sequence DC(P77):DG(O78) DG(P78):DC(O77) DC(P79):DG(O76) DC(P80):DG(O75) DC(P81):DG(O74) DG(P82):DC(O73) DC(P83):DG(O72) DT(P84):DA(O71) DT(P85):DA(O70) DC(P86):DG(O69) DG(P87):DC(O68) DG(P88):DC(O67) DG(P89):DC(O66) DG(P90):DC(O65) DC(P91):DG(O64) DA(P92):DT(O63) DA(P93):DT(O62) DC(P94):DG(O61) DC(P95):DG(O60) DC(P96):DG(O59) DT(P97):DA(O58) DG(P98):DC(O57) DC(P99):DG(O56) DC(P100):DG(O55) DA(P101):DT(O54) DG(P102):DC(O53) DT(P103):DA(O52) DC(P104):DG(O51) DT(P105):DA(O50) DA(P106):DT(O49) DA(P107):DT(O48) DT(P108):DA(O47) DA(P109):DT(O46) DC(P110):DG(O45) DA(P111):DT(O44) DA(P112):DT(O43) DA(P113):DT(O42) DT(P114):DA(O41) DC(P115):DG(O40) DC(P116):DG(O39) DG(P117):DC(O38) DG(P118):DC(O37) DC(P119):DG(O36) DA(P120):DT(O35) DA(P121):DT(O34) DT(P122):DA(O33) DG(P123):DC(O32) DG(P124):DC(O31) DA(P125):DT(O30) DG(P126):DC(O29) DT(P127):DA(O28) DC(P128):DG(O27) DA(P129):DT(O26) DA(P130):DT(O25) DG(P131):DC(O24) DA(P132):DT(O23) DC(P133):DG(O22) DC(P134):DG(O21) DA(P135):DT(O20) DG(P136):DC(O19) DG(P137):DC(O18) DT(P138):DA(O17) DT(P139):DA(O16) DC(P140):DG(O15) DG(P141):DC(O14) chainC (152) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1033) GLN1062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekRydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvreRmttqdveaitpqtliniRpvvaaikeffgtsqlsqfmdqnnplsglthkrrllalgpggLsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaQfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlss >6vw0_CDFJM: title=MYCOBACTERIUM TUBERCULOSIS RNAP S456L MUTANT OPEN PROMOTER COMPLEX organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DC(P77):DG(O78) DG(P78):DC(O77) DC(P79):DG(O76) DC(P80):DG(O75) DC(P81):DG(O74) DG(P82):DC(O73) DC(P83):DG(O72) DT(P84):DA(O71) DT(P85):DA(O70) DC(P86):DG(O69) DG(P87):DC(O68) DG(P88):DC(O67) DG(P89):DC(O66) DG(P90):DC(O65) DC(P91):DG(O64) DA(P92):DT(O63) DA(P93):DT(O62) DC(P94):DG(O61) DC(P95):DG(O60) DC(P96):DG(O59) DT(P97):DA(O58) DG(P98):DC(O57) DC(P99):DG(O56) DC(P100):DG(O55) DA(P101):DT(O54) DG(P102):DC(O53) DT(P103):DA(O52) DC(P104):DG(O51) DT(P105):DA(O50) DA(P106):DT(O49) DA(P107):DT(O48) DT(P108):DA(O47) DA(P109):DT(O46) DC(P110):DG(O45) DA(P111):DT(O44) DA(P112):DT(O43) DA(P113):DT(O42) DT(P114):DA(O41) DC(P115):DG(O40) DC(P116):DG(O39) DG(P117):DC(O38) DG(P118):DC(O37) DC(P119):DG(O36) DA(P120):DT(O35) DA(P121):DT(O34) DT(P122):DA(O33) DG(P123):DC(O32) DG(P124):DC(O31) DA(P125):DT(O30) DG(P126):DC(O29) DT(P127):DA(O28) DC(P128):DG(O27) DA(P129):DT(O26) DA(P130):DT(O25) DG(P131):DC(O24) DA(P132):DT(O23) DC(P133):DG(O22) DC(P134):DG(O21) DA(P135):DT(O20) DG(P136):DC(O19) DG(P137):DC(O18) DT(P138):DA(O17) DT(P139):DA(O16) DC(P140):DG(O15) DG(P141):DC(O14) chainC (152) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1033) GLN1062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (332) LEU330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) ASP331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) PRO394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) ARG427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) ALA501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (504) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (869) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (870) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ASP226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) VAL228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LEU240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ASN299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) LEU302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) ARG313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) PHE317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ASP336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) SER344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) THR345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) TYR346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) THR348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) TRP349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) TRP350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) ARG357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) VAL370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) HIS371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ASN377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ARG381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ARG384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) GLU419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) ILE421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) SER422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) GLN425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) GLU430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) SER433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) PHE438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) THR499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 (295) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 17 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) GLU501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 4 0 0 0 0 0 0 0 0 0 0 0 0 (297) ARG502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 (299) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) GLN505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 chainJ ( 2) ARG4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) LEU6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 84) TRP85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) SER86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) TYR89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekRydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvreRmttqdveaitpqtliniRpvvaaikeffgtsqlsqfmdqnnplsglthkrrllalgpggLsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaQfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlss/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLDggRfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvtgPgnRplkslsdllkgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrtditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/edesealrqarkdaeltasaDsVRayLkqigkvaLlnaeeEvelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleaNlRLvvslakrytgRgmaFldliqegnlgliravekFDytKgYkfSTYaTWWiRQaitRamadqartiripVHmvEviNklgRiqRellqdlgreptpeelakemditpekvleiqqyarEpISldQtigdEgdSqlgdFiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyl/dRvLrgsrlgavsyetdrnhdlaprqiaryrtdngeefevpfaddaeipgtwlcrngmegtliegdlpepkkvkpprthwdmllerrsieeleellkerlelirsrrrg/ifkvgdtvvyphhgaalveaietrtikgeqkeylvlkvaqgdltvrvpaenaeyvgvrdvvgqegldkvfqvlraphteeptnWSrrYKanleklasgdvnkvaevvrdlwrrdqerglsagekrmlakarqilvgelalaestddakaetildevlaa >6vyq_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A1 (TTC-A1) CONTAINING AN 15 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vyq_B:N-utilization_substance_G_protein_NusG,_N-terminal_domain; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A1 (TTC-A1) CONTAINING AN 15 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainB ( 10) PHE15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq >6vyr_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A1 (TTC-A1) CONTAINING AN 18 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 27 14 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6vyr_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A1 (TTC-A1) CONTAINING AN 18 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vys_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A1 (TTC-A1) CONTAINING A 21 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vys_B:N-utilization_substance_G_protein_NusG,_N-terminal_domain; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A1 (TTC-A1) CONTAINING A 21 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainB ( 10) PHE15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq >6vyt_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A2 (TTC-A2) CONTAINING A 15 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT P-SITE AND E-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6vyt_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A2 (TTC-A2) CONTAINING A 15 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT P-SITE AND E-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 27 14 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (240) LEU255 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vyu_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX C2 (TTC-C2) CONTAINING A 27 NT LONG MRNA SPACER organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 27 14 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6vyu_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX C2 (TTC-C2) CONTAINING A 27 NT LONG MRNA SPACER organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vyw_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX C3 (TTC-C3) CONTAINING MRNA WITH A 27 NT LONG SPACER, NUSG, AND FMET-TRNAS AT E- SITE AND P-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 27 14 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (240) LEU255 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vyw_E:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Ribosomal_protein_S20; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX C3 (TTC-C3) CONTAINING MRNA WITH A 27 NT LONG SPACER, NUSG, AND FMET-TRNAS AT E- SITE AND P-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainE (240) LEU255 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vyx_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX C4 (TTC-C4) CONTAINING MRNA WITH A 21 NT LONG SPACER, TRANSCRIPTION FACTOR NUSG, AND FMET-TRNAS AT P-SITE AND E-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 27 14 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (240) LEU255 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgveddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vyx_B:N-utilization_substance_G_protein_NusG,_N-terminal_domain; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX C4 (TTC-C4) CONTAINING MRNA WITH A 21 NT LONG SPACER, TRANSCRIPTION FACTOR NUSG, AND FMET-TRNAS AT P-SITE AND E-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq >6vyy_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX C5 (TTC-C5) CONTAINING MRNA WITH A 21 NT LONG SPACER, NUSG, AND FMET-TRNAS AT E- SITE AND P-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 27 14 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgveddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6vyy_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX C5 (TTC-C5) CONTAINING MRNA WITH A 21 NT LONG SPACER, NUSG, AND FMET-TRNAS AT E- SITE AND P-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgveddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vyz_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX C6 (TTC-C6) CONTAINING MRNA WITH A 21 NT LONG SPACER, NUSA, AND FMET-TRNAS AT E- SITE AND P-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgveddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vyz_E:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Ribosomal_protein_S20; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX C6 (TTC-C6) CONTAINING MRNA WITH A 21 NT LONG SPACER, NUSA, AND FMET-TRNAS AT E- SITE AND P-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainE (240) LEU255 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vz2_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX D1 (TTC-D1) CONTAINING MRNA WITH A 27 NT LONG SPACER, NUSG, AND FMET-TRNAS AT E- SITE AND P-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vz2_B:N-utilization_substance_G_protein_NusG,_N-terminal_domain; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX D1 (TTC-D1) CONTAINING MRNA WITH A 27 NT LONG SPACER, NUSG, AND FMET-TRNAS AT E- SITE AND P-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq >6vz3_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX D2 (TTC-D2) CONTAINING MRNA WITH A 27 NT LONG SPACER organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgveddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6vz3_ABE:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX D2 (TTC-D2) CONTAINING MRNA WITH A 27 NT LONG SPACER organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgveddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vz4_B:Histone-fold; title=CRYO-EM STRUCTURE OF STH1-ARP7-ARP9-RTT102 BOUND TO THE NUCLEOSOME IN ADP BERYLLIUM FLUORIDE STATE organism=? DNA sequence DT(J1):DA(I147) DC(J2):DG(I146) DA(J3):DT(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainB ( 31) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence akrhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >6vz5_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX D3 (TTC-D3) CONTAINING MRNA WITH A 21 NT LONG SPACER, NUSG, AND FMET-TRNAS AT E- SITE AND P-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 27 14 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (240) LEU255 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vz5_E:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Ribosomal_protein_S20; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX D3 (TTC-D3) CONTAINING MRNA WITH A 21 NT LONG SPACER, NUSG, AND FMET-TRNAS AT E- SITE AND P-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainE (240) LEU255 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vz7_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX C1 (TTC-C1) CONTAINING A 27 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT P-SITE AND E-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 27 14 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6vz7_ABE:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX C1 (TTC-C1) CONTAINING A 27 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT P-SITE AND E-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 27 14 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (240) LEU255 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vzj_AE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A1 (TTC-A1) CONTAINING MRNA WITH A 15 NT LONG SPACER, FMET-TRNAS AT E-SITE AND P- SITE, AND LACKING TRANSCRIPTION FACTOR NUSG organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6vzj_E:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Ribosomal_protein_S20; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A1 (TTC-A1) CONTAINING MRNA WITH A 15 NT LONG SPACER, FMET-TRNAS AT E-SITE AND P- SITE, AND LACKING TRANSCRIPTION FACTOR NUSG organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6w0m_A:DNA-glycosylase;TATA-box_binding_protein-like; title=HUMAN 8-OXOGUANINE GLYCOSYLASE CROSSLINKED WITH OXOG LESION CONTAINING DNA organism=Homo sapiens DNA sequence DG(C3):DC(B31) DT(C4):DA(B30) DA(C5):DT(B29) DG(C6):DC(B28) DA(C7):DT(B27) DC(C8):DG(B26) DC(C9):8OG(B25) DT(C10):DA(B24) DG(C11):DC(B23) DG(C12):DC(B22) DA(C13):DT(B21) DC(C14):DG(B20) DG(C15):DC(B19) chainA ( 37) PHE45 0 0 0 0 0 0 1 0 0 0 0 0 0 (133) PHE144 0 0 0 0 0 0 5 0 0 0 0 0 0 (136) SER147 0 0 0 0 0 0 1 0 0 0 0 0 0 (138) ASN149 0 0 0 0 0 54 6 5 0 0 0 0 0 (139) ASN150 0 0 0 0 0 0 0 2 0 0 0 0 0 (140) ASN151 0 0 0 0 0 0 0 5 1 0 0 0 0 (141) ILE152 0 0 0 0 0 0 1 0 0 0 0 0 0 (143) ARG154 0 0 0 0 0 0 10 9 0 0 0 0 0 (144) ILE155 0 0 0 0 0 0 1 0 0 0 0 0 0 (192) TYR203 0 0 0 0 0 24 18 0 0 0 0 0 0 (193) ARG204 0 0 0 0 0 0 11 0 0 0 0 0 0 (238) GLN249 0 0 0 0 0 0 2 0 0 0 0 0 0 (246) MET257 0 0 0 0 0 0 5 0 0 0 0 0 0 (255) PRO266 0 0 0 0 0 0 6 0 0 0 0 0 0 (257) ASP268 0 0 0 0 0 0 10 0 0 0 0 0 0 (260) MET271 0 0 0 0 0 0 1 0 0 0 0 0 0 (281) SER292 0 1 0 0 0 0 0 0 0 0 0 0 0 (282) PRO293 0 1 0 0 0 0 0 0 0 0 0 0 0 (304) GLN315 0 0 0 0 0 0 9 0 0 0 0 0 0 (308) PHE319 0 0 0 0 0 0 43 0 0 0 0 0 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqqvaqkfqgvrllrqdpieclfsficssNNNiaRitgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgYRarcvsasaraileeqgglawlqqlressyeeahkalcilpgvgtqvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpSPqtnkelgnffrslwgpyagwaqavlfsadlrq >6w0q_A:DNase_I-like; title=APE1 ENDONUCLEASE PRODUCT COMPLEX D148E organism=Homo sapiens DNA sequence DG(V1):DC(D11) DG(V2):DC(D10) DA(V3):DT(D9) DT(V4):DA(D8) DC(V5):DG(D7) DC(V6):DG(D6) DG(V7):DC(D5) DT(V8):DA(D4) DC(V9):DG(D3) DG(V10):DC(D2) chainA (135) ARG177 0 0 0 0 0 0 0 0 0 24 (187) ASN229 0 0 0 0 0 0 0 0 0 3 (228) MET270 0 0 0 0 0 0 0 0 0 4 (229) MET271 0 0 0 0 0 0 0 0 3 2 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetkcsenklpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigeeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtyMMnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6w0r_A:DNA-glycosylase;TATA-box_binding_protein-like; title=HUMAN 8-OXOGUANINE GLYCOSYLASE INTERROGATING FULLY INTRAHELICAL UNDAMAGED DNA organism=Homo sapiens DNA sequence DC(C6):DG(B24) DC(C7):DG(B23) DT(C8):DA(B22) DG(C9):DC(B21) chainA (138) ASN149 0 9 2 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqqvaqkfqgvrllrqdpieclfsficssNnniaritgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgyrarcvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadciclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwgpyagwaqavlfsadl >6w13_A:DNA-glycosylase;TATA-box_binding_protein-like; title=HUMAN 8-OXOGUANINE GLYCOSYLASE INTERROGATING FULLY INTRAHELICAL OXOG LESION DNA organism=Homo sapiens DNA sequence DC(B21):DG(C9) DA(B22):DT(C8) 8OG(B23):DC(C7) DG(B24):DC(C6) DT(B25):DA(C5) chainA (138) ASN149 0 4 8 0 0 prot.sequence gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltqteeqlhctvyrsqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqqvaqkfqgvrllrqdpieclfsficssNnniaritgmverlcqafgprliqlddvtyhgfpslqalagpeveahlrklglgyrarcvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadwiclmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwgpyagwaqavlfsadlr >6w1a_A:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF STREPTOCOCCUS DYSGALACTIAE SHP PHEROMONE RECEPTOR RGG2 BOUND TO DNA organism=Streptococcus dysgalactiae DNA sequence DT(F1):DA(E28) DT(F2):DA(E27) DT(F3):DA(E26) DT(F4):DA(E25) DT(F5):DA(E24) DT(F6):DA(E23) DG(F7):DC(E22) DT(F8):DA(E21) DT(F9):DA(E20) DG(F10):DC(E19) DT(F11):DA(E18) DG(F12):DC(E17) DA(F13):DT(E16) DA(F14):DT(E15) DA(F15):DT(E14) DG(F16):DC(E13) DT(F17):DA(E12) DG(F18):DC(E11) DG(F19):DC(E10) DG(F20):DC(E9) DA(F21):DT(E8) DA(F22):DT(E7) DA(F23):DT(E6) DA(F24):DT(E5) DA(F25):DT(E4) DT(F26):DA(E3) DG(F27):DC(E2) DG(F28):DC(E1) chainA ( 27) SER29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 28) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 1 0 0 0 0 0 0 0 ( 29) SER31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 0 ( 30) GLN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 33) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 11 1 0 0 0 0 0 0 0 0 0 prot.sequence kelgktlrrlrqgkqvsissladehlSKSQiSRfergeseiscsrllnlldklnitidefvsthskththfftllsrvrkyyaeknvakllklledyahkdyestmikailssieptvepseeevtrltdylfsveqwgyyeiillgncsrfinyntlflltkemvtsfayseqnktnktlvtqlsincliisidysyfdhshyliekiefllrdelnfyektvflyvhgyyklkqgqvsgkddmrqalqifkylgedalyysykehyrkevlg >6w1a_AB:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF STREPTOCOCCUS DYSGALACTIAE SHP PHEROMONE RECEPTOR RGG2 BOUND TO DNA organism=Streptococcus dysgalactiae DNA sequence DC(E1):DG(F28) DC(E2):DG(F27) DA(E3):DT(F26) DT(E4):DA(F25) DT(E5):DA(F24) DT(E6):DA(F23) DT(E7):DA(F22) DT(E8):DA(F21) DC(E9):DG(F20) DC(E10):DG(F19) DC(E11):DG(F18) DA(E12):DT(F17) DC(E13):DG(F16) DT(E14):DA(F15) DT(E15):DA(F14) DT(E16):DA(F13) DC(E17):DG(F12) DA(E18):DT(F11) DC(E19):DG(F10) DA(E20):DT(F9) DA(E21):DT(F8) DC(E22):DG(F7) DA(E23):DT(F6) DA(E24):DT(F5) DA(E25):DT(F4) DA(E26):DT(F3) DA(E27):DT(F2) DA(E28):DT(F1) chainA ( 27) SER29 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LYS30 0 0 0 0 0 0 0 1 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) SER31 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) GLN32 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER34 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG35 0 0 0 0 0 0 0 0 0 1 11 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) SER29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 28) SER31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 1 0 0 0 0 0 0 0 0 ( 29) GLN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 ( 31) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 ( 32) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 19 0 0 0 0 0 0 0 0 ( 35) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence kelgktlrrlrqgkqvsissladehlSKSQiSRfergeseiscsrllnlldklnitidefvsthskththfftllsrvrkyyaeknvakllklledyahkdyestmikailssieptvepseeevtrltdylfsveqwgyyeiillgncsrfinyntlflltkemvtsfayseqnktnktlvtqlsincliisidysyfdhshyliekiefllrdelnfyektvflyvhgyyklkqgqvsgkddmrqalqifkylgedalyysykehyrkevlg/elgktlrrlrqgkqvsissladehlSkSQiSRfeRgeseiscsrllnlldklnitidefvsthskththfftllsrvrkyyaeknvakllklledyahkdyestmikailssieptvepseeevtrltdylfsveqwgyyeiillgncsrfinyntlflltkemvtsfayseqnktnktlvtqlsincliisidysyfdhshyliekiefllrdelnfyektvflyvhgyyklkqgqvsgkddmrqalqifkylgedalyysykehyrkevlg >6w1f_A:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF STREPTOCOCCUS THERMOPHILUS SHP PHEROMONE RECEPTOR RGG3 BOUND TO DNA organism=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) / Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) DNA sequence DC(E1):DG(F28) DA(E2):DT(F27) DT(E3):DA(F26) DA(E4):DT(F25) DA(E5):DT(F24) DT(E6):DA(F23) DT(E7):DA(F22) DT(E8):DA(F21) DT(E9):DA(F20) DC(E10):DG(F19) DC(E11):DG(F18) DC(E12):DG(F17) DA(E13):DT(F16) DT(E14):DA(F15) DT(E15):DA(F14) DT(E16):DA(F13) DC(E17):DG(F12) DC(E18):DG(F11) DC(E19):DG(F10) DC(E20):DG(F9) DA(E21):DT(F8) DA(E22):DT(F7) DC(E23):DG(F6) DA(E24):DT(F5) DA(E25):DT(F4) DA(E26):DT(F3) DA(E27):DT(F2) chainA ( 18) CYS21 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) SER29 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS30 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER31 0 0 0 0 0 0 0 0 0 3 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN32 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER34 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG35 0 0 0 0 0 0 0 0 0 0 4 4 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klgstlrkvrngkqisiCsvadehlSKSQiSRfergeseiscirlinildklhitldeflilhdedytktesfanlvqyirkqyslqninniqsllsdssnytldpfektmvksilhtmdssiipsddellqladylfkvekwgyyeiillgncvrtidynsvflltkemlnnyiysslnktnkrivtqlainclilsidmeeftncfylideikalldnelnfyeqtvflyatgyfefkrwqstsgiekmkqaiqvldilgednlklhytihfdklinn >6w1f_AB:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF STREPTOCOCCUS THERMOPHILUS SHP PHEROMONE RECEPTOR RGG3 BOUND TO DNA organism=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) / Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) / Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) / Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) DNA sequence DC(E1):DG(F28) DA(E2):DT(F27) DT(E3):DA(F26) DA(E4):DT(F25) DA(E5):DT(F24) DT(E6):DA(F23) DT(E7):DA(F22) DT(E8):DA(F21) DT(E9):DA(F20) DC(E10):DG(F19) DC(E11):DG(F18) DC(E12):DG(F17) DA(E13):DT(F16) DT(E14):DA(F15) DT(E15):DA(F14) DT(E16):DA(F13) DC(E17):DG(F12) DC(E18):DG(F11) DC(E19):DG(F10) DC(E20):DG(F9) DA(E21):DT(F8) DA(E22):DT(F7) DC(E23):DG(F6) DA(E24):DT(F5) DA(E25):DT(F4) DA(E26):DT(F3) DA(E27):DT(F2) chainA ( 18) CYS21 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) SER29 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS30 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER31 0 0 0 0 0 0 0 0 0 3 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) GLN32 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) SER34 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG35 0 0 0 0 0 0 0 0 0 0 4 4 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 18) CYS21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 26) SER29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 28) SER31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 5 0 0 0 0 0 0 ( 29) GLN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 31) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 32) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 1 0 0 0 0 0 0 0 ( 38) SER41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence klgstlrkvrngkqisiCsvadehlSKSQiSRfergeseiscirlinildklhitldeflilhdedytktesfanlvqyirkqyslqninniqsllsdssnytldpfektmvksilhtmdssiipsddellqladylfkvekwgyyeiillgncvrtidynsvflltkemlnnyiysslnktnkrivtqlainclilsidmeeftncfylideikalldnelnfyeqtvflyatgyfefkrwqstsgiekmkqaiqvldilgednlklhytihfdklinn/klgstlrkvrngkqisiCsvadehlSkSQiSRfergeSeiscirlinildklhitldeflilhdedytktesfanlvqyirkqyslqninniqsllsdssnytldpfektmvksilhtmdssiipsddellqladylfkvekwgyyeiillgncvrtidynsvflltkemlnnyiysslnktnkrivtqlainclilsidmeeftncfylideikalldnelnfyeqtvflyatgyfefkrwqstsgiekmkqaiqvldilgednlklhytihfdklinn >6w2m_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=ABORTIVE TERNARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH 8OG-DC BASE PAIR AT THE PRIMER TERMINUS AND FLIPPED OUT DA organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DA(P10):DG(T6) DC(P11):DC(T5) chainA ( 25) HIS34 0 0 0 0 0 0 0 0 0 0 28 ( 31) ARG40 0 0 0 0 0 0 0 0 0 21 0 (225) LYS234 0 0 0 0 0 0 0 5 1 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 2 0 (266) SER275 0 0 0 0 0 0 0 0 0 1 0 (267) ASP276 0 0 0 0 0 0 0 0 0 20 0 (270) ASN279 0 0 0 0 0 0 0 0 0 4 0 (271) LYS280 0 0 0 0 0 0 0 0 0 21 0 (274) ARG283 0 0 0 0 0 0 0 0 0 14 0 (326) GLU335 0 0 0 0 0 0 0 0 0 1 0 prot.sequence tlnggitdmltelanfeknvsqaiHkynayRkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgSDifNKnmRahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrsE >6w2p_A:DNase_I-like; title=APE1 ENDONUCLEASE PRODUCT COMPLEX L104R organism=Homo sapiens DNA sequence DG(V1):DC(D11) DG(V2):DC(D10) DA(V3):DT(D9) DT(V4):DA(D8) DC(V5):DG(D7) DC(V6):DG(D6) DG(V7):DC(D5) DT(V8):DA(D4) DC(V9):DG(D3) DG(V10):DC(D2) chainA (135) ARG177 0 0 0 0 0 0 0 0 0 23 (187) ASN229 0 0 0 0 0 0 0 0 0 7 (228) MET270 0 0 0 0 0 0 0 0 0 2 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetkcsenkrpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwTyMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6w3l_B:DNase_I-like; title=APE1 EXONUCLEASE SUBSTRATE COMPLEX WILD-TYPE organism=Homo sapiens DNA sequence DC(E13):DG(D9) DG(E14):DC(D8) DC(E15):DG(D7) DA(E16):DT(D6) DT(E17):DA(D5) DC(E18):DG(D4) DA(E19):DT(D3) DG(E20):DC(D2) DC(E21):DG(D1) chainB ( 56) LYS98 0 2 2 0 0 0 0 0 0 (135) ARG177 8 0 0 0 0 0 0 0 0 (227) TYR269 4 0 0 0 0 0 0 0 0 (228) MET270 13 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkknagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6w3n_B:DNase_I-like; title=APE1 EXONUCLEASE SUBSTRATE COMPLEX D148E organism=Homo sapiens DNA sequence DG(D1):DC(E21) DC(D2):DG(E20) DT(D3):DA(E19) DG(D4):DC(E18) DA(D5):DT(E17) DT(D6):DA(E16) DG(D7):DC(E15) DC(D8):DG(E14) DG(D9):DC(E13) chainB ( 56) LYS98 0 0 0 0 0 0 2 2 0 (135) ARG177 0 0 0 0 0 0 0 0 9 (227) TYR269 0 0 0 0 0 0 0 0 3 (228) MET270 0 0 0 0 0 0 0 0 22 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigeeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkknagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6w3q_B:DNase_I-like; title=APE1 EXONUCLEASE SUBSTRATE COMPLEX L104R organism=Homo sapiens DNA sequence DC(E13):DG(D9) DG(E14):DC(D8) DC(E15):DG(D7) DA(E16):DT(D6) DT(E17):DA(D5) DC(E18):DG(D4) DA(E19):DT(D3) DG(E20):DC(D2) DC(E21):DG(D1) chainB ( 56) LYS98 0 0 1 0 0 0 0 0 0 (227) TYR269 4 0 0 0 0 0 0 0 0 (228) MET270 9 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetKcsenkrpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagrglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkknagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6w3u_B:DNase_I-like; title=APE1 EXONUCLEASE SUBSTRATE COMPLEX R237C organism=Homo sapiens DNA sequence DG(D1):DC(E21) DC(D2):DG(E20) DT(D3):DA(E19) DG(D4):DC(E18) DA(D5):DT(E17) DT(D6):DA(E16) DG(D7):DC(E15) DC(D8):DG(E14) DG(D9):DC(E13) chainB ( 56) LYS98 0 0 0 0 0 0 1 2 0 (227) TYR269 0 0 0 0 0 0 0 0 5 (228) MET270 0 0 0 0 0 0 0 0 12 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagrglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkknagftpqecqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6w43_A:DNase_I-like; title=APE1 AP-ENDONUCLEASE PRODUCT COMPLEX R237C organism=Homo sapiens DNA sequence DC(D2):DG(V10) DG(D3):DC(V9) DA(D4):DT(V8) DC(D5):DG(V7) DG(D6):DC(V6) DG(D7):DC(V5) DA(D8):DT(V4) DT(D9):DA(V3) DC(D10):DG(V2) DC(D11):DG(V1) chainA (135) ARG177 22 0 0 0 0 0 0 0 0 0 (187) ASN229 5 0 0 0 0 0 0 0 0 0 (228) MET270 4 0 0 0 0 0 0 0 0 0 (229) MET271 4 4 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetkcsenklpaelqelpglshqywsapsdkegysgvgllsrqcplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgNkkNagftpqecqgfgellqavpladsfrhlypntpyaytfwtyMMnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6w4i_B:DNase_I-like; title=APE1 Y269A PRODUCT COMPLEX WITH ABASIC DNA organism=Homo sapiens DNA sequence DG(F1):DC(C11) DG(F2):DC(C10) DA(F3):DT(C9) DT(F4):DA(C8) DC(F5):DG(C7) DC(F6):DG(C6) DG(F7):DC(C5) DT(F8):DA(C4) DC(F9):DG(C3) DG(F10):DC(C2) chainB (135) ARG177 0 0 0 0 0 0 0 0 0 20 (184) ASN226 0 0 0 0 0 0 0 0 1 0 (187) ASN229 0 0 0 0 0 0 0 0 0 6 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetkcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtammnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6w4t_B:DNase_I-like; title=APE1 Y269A PHOSPHOROTHIOATE SUBSTRATE COMPLEX WITH ABASIC DNA organism=Homo sapiens DNA sequence DG(F1):DC(C21) DG(F2):DC(C20) DA(F3):DT(C19) DT(F4):DA(C18) DC(F5):DG(C17) DC(F6):DG(C16) DG(F7):DC(C15) DT(F8):DA(C14) DC(F9):DG(C13) DG(F10):DC(C12) DG(F11):DV3(C11) DA(F12):DT(C10) DC(F13):DG(C9) DG(F14):DC(C8) DC(F15):DG(C7) DA(F16):DT(C6) DT(F17):DA(C5) DC(F18):DG(C4) DA(F19):DT(C3) DG(F20):DC(C2) DC(F21):DG(C1) chainB ( 56) LYS98 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 (135) ARG177 0 0 0 0 0 0 0 0 0 40 6 16 0 0 0 0 0 0 0 0 0 (184) ASN226 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (187) ASN229 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (227) ALA269 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (228) MET270 0 0 0 0 0 0 0 0 0 8 4 3 0 0 0 0 0 0 0 0 0 (229) MET271 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtAMMnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >6w5i_GHIJKLMN: title=CRYO-EM STRUCTURE OF MLL1 IN COMPLEX WITH RBBP5, WDR5, SET1, AND ASH2L BOUND TO THE NUCLEOSOME (CLASS01) organism=XENOPUS LAEVIS DNA sequence DC(O3):DG(P145) DG(O4):DC(P144) DA(O5):DT(P143) DG(O6):DC(P142) DA(O7):DT(P141) DA(O8):DT(P140) DT(O9):DA(P139) DC(O10):DG(P138) DC(O11):DG(P137) DC(O12):DG(P136) DG(O13):DC(P135) DG(O14):DC(P134) DT(O15):DA(P133) DG(O16):DC(P132) DC(O17):DG(P131) DC(O18):DG(P130) DG(O19):DC(P129) DA(O20):DT(P128) DG(O21):DC(P127) DG(O22):DC(P126) DC(O23):DG(P125) DC(O24):DG(P124) DG(O25):DC(P123) DC(O26):DG(P122) DT(O27):DA(P121) DC(O28):DG(P120) DA(O29):DT(P119) DA(O30):DT(P118) DT(O31):DA(P116) DG(O33):DC(P115) DG(O34):DC(P114) DT(O35):DA(P113) DC(O36):DG(P112) DG(O37):DC(P111) DT(O38):DA(P110) DA(O39):DT(P109) DG(O40):DC(P108) DA(O41):DT(P107) DC(O42):DG(P106) DA(O43):DT(P105) DG(O44):DC(P104) DC(O45):DG(P103) DT(O46):DA(P102) DC(O47):DG(P101) DT(O48):DA(P100) DA(O49):DT(P99) DG(O50):DC(P98) DC(O51):DG(P97) DA(O52):DT(P96) DC(O53):DG(P95) DC(O54):DG(P94) DG(O55):DC(P93) DC(O56):DG(P92) DT(O57):DA(P91) DT(O58):DA(P90) DA(O59):DT(P89) DA(O60):DT(P87) DA(O61):DG(P86) DG(O63):DC(P85) DC(O64):DT(P83) DA(O65):DG(P82) DC(O66):DC(P81) DG(O67):DA(P80) DT(O68):DT(P79) DC(O70):DG(P78) DG(O71):DC(P77) DC(O72):DG(P76) DG(O73):DC(P75) DC(O74):DA(P73) DT(O75):DC(P72) DG(O76):DA(P71) DT(O77):DG(P70) DC(O78):DG(P69) DC(O79):DG(P68) DC(O81):DG(P67) DC(O82):DG(P66) DG(O83):DC(P65) DC(O84):DG(P64) DG(O85):DC(P63) DT(O86):DA(P62) DT(O87):DA(P61) DT(O88):DA(P60) DT(O89):DA(P59) DA(O90):DT(P58) DA(O91):DT(P57) DC(O92):DG(P56) DC(O93):DG(P55) DG(O94):DC(P54) DC(O95):DG(P53) DC(O96):DG(P52) DA(O97):DT(P51) DA(O98):DT(P50) DG(O99):DC(P49) DG(O100):DC(P47) DG(O101):DC(P46) DA(O103):DT(P45) DT(O104):DA(P43) DT(O105):DT(P42) DC(O107):DG(P41) DT(O108):DA(P40) DC(O109):DG(P39) DC(O110):DG(P38) DC(O111):DG(P37) DT(O112):DT(P35) DG(O114):DC(P34) DT(O115):DA(P33) DC(O116):DG(P32) DT(O117):DA(P31) DC(O118):DG(P29) DA(O120):DT(P28) DG(O121):DC(P27) DG(O122):DC(P26) DC(O123):DG(P25) DA(O124):DT(P24) DC(O125):DG(P23) DG(O126):DC(P22) DT(O127):DA(P21) DG(O128):DC(P20) DT(O129):DA(P19) DC(O130):DG(P18) DA(O131):DT(P17) DG(O132):DC(P16) DA(O133):DT(P15) DT(O134):DA(P14) DA(O135):DT(P13) DT(O136):DA(P12) DA(O137):DT(P11) DT(O138):DA(P10) DA(O139):DT(P9) DC(O140):DG(P8) DA(O141):DT(P7) DT(O142):DA(P6) DC(O143):DG(P5) DC(O144):DG(P4) DG(O145):DC(P3) DA(O146):DT(P2) DT(O147):DA(P1) chainG ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH chainI ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 55) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 chainL chainM ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/kvlRDniqgitkpairrlarrggvkrisGliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/trkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkRstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/kvlRdNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/trkesyaiyvykvlkqvhpdtgisskamsiMnsfvndvferiageasrlahynkrstitsreiqtAvrlllpgelakhavsegtkavtkytsa >6w5m_G:Histone-fold; title=CRYO-EM STRUCTURE OF MLL1 IN COMPLEX WITH RBBP5, WDR5, SET1, AND ASH2L BOUND TO THE NUCLEOSOME (CLASS02) organism=? DNA sequence DA(P1):DT(O147) DT(P2):DA(O146) DC(P3):DG(O145) DG(P4):DC(O144) DG(P5):DC(O143) DA(P6):DT(O142) DT(P7):DA(O141) DG(P8):DC(O140) DT(P9):DA(O139) DA(P10):DT(O138) DT(P11):DA(O137) DA(P12):DT(O136) DT(P13):DA(O135) DA(P14):DT(O134) DT(P15):DA(O133) DC(P16):DG(O132) DT(P17):DA(O131) DG(P18):DC(O130) DA(P19):DT(O129) DC(P20):DG(O128) DA(P21):DT(O127) DC(P22):DG(O126) DG(P23):DC(O125) DT(P24):DA(O124) DG(P25):DC(O123) DC(P26):DG(O122) DC(P27):DG(O121) DT(P28):DA(O120) DG(P29):DC(O119) DG(P30):DC(O118) DA(P31):DT(O117) DG(P32):DC(O116) DA(P33):DT(O115) DC(P34):DG(O114) DT(P35):DA(O113) DA(P36):DT(O112) DG(P37):DC(O111) DG(P38):DC(O110) DG(P39):DC(O109) DA(P40):DT(O108) DG(P41):DC(O107) DT(P42):DT(O105) DA(P44):DT(O104) DT(P45):DA(O103) DC(P46):DG(O102) DC(P47):DG(O101) DC(P48):DG(O100) DC(P49):DG(O99) DT(P50):DA(O98) DT(P51):DA(O97) DG(P52):DC(O96) DG(P53):DC(O95) DC(P54):DG(O94) DG(P55):DC(O93) DG(P56):DC(O92) DT(P57):DA(O91) DT(P58):DA(O90) DA(P59):DT(O89) DA(P60):DT(O88) DA(P61):DT(O87) DA(P62):DT(O86) DC(P63):DG(O85) DG(P64):DC(O84) DC(P65):DG(O83) DG(P66):DC(O82) DG(P67):DC(O81) DG(P68):DC(O79) DG(P69):DC(O78) DA(P71):DT(O77) DC(P72):DG(O76) DA(P73):DT(O75) DG(P74):DC(O74) DC(P75):DG(O73) DG(P76):DC(O72) DC(P77):DG(O71) DG(P78):DC(O70) DT(P79):DA(O69) DA(P80):DT(O68) DC(P81):DG(O67) DG(P82):DC(O66) DT(P83):DA(O65) DG(P84):DC(O64) DC(P85):DG(O63) DG(P86):DC(O62) DT(P87):DA(O60) DT(P89):DA(O59) DA(P90):DT(O58) DA(P91):DT(O57) DG(P92):DC(O56) DC(P93):DG(O55) DG(P94):DC(O54) DG(P95):DC(O53) DT(P96):DA(O52) DG(P97):DC(O51) DC(P98):DG(O50) DT(P99):DA(O49) DA(P100):DT(O48) DG(P101):DC(O47) DA(P102):DT(O46) DG(P103):DC(O45) DC(P104):DG(O44) DT(P105):DA(O43) DG(P106):DC(O42) DT(P107):DA(O41) DC(P108):DG(O40) DT(P109):DA(O39) DA(P110):DT(O38) DC(P111):DG(O37) DG(P112):DC(O36) DA(P113):DT(O35) DC(P114):DG(O34) DC(P115):DG(O33) DA(P116):DT(O31) DT(P118):DA(O30) DT(P119):DA(O29) DG(P120):DC(O28) DA(P121):DT(O27) DG(P122):DC(O26) DC(P123):DG(O25) DG(P124):DC(O24) DG(P125):DC(O23) DC(P126):DG(O22) DC(P127):DG(O21) DT(P128):DA(O20) DC(P129):DG(O19) DG(P130):DC(O18) DG(P131):DC(O17) DC(P132):DG(O16) DA(P133):DT(O15) DC(P134):DG(O14) DC(P135):DG(O13) DG(P136):DC(O12) DG(P137):DC(O11) DG(P138):DC(O10) DA(P139):DT(O9) DT(P140):DA(O8) DT(P141):DA(O7) DC(P142):DG(O6) DT(P143):DA(O5) DC(P144):DG(O4) DG(P145):DC(O3) chainG ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >6w5m_GHIJKLMN: title=CRYO-EM STRUCTURE OF MLL1 IN COMPLEX WITH RBBP5, WDR5, SET1, AND ASH2L BOUND TO THE NUCLEOSOME (CLASS02) organism=XENOPUS LAEVIS DNA sequence DA(P1):DT(O147) DT(P2):DA(O146) DC(P3):DG(O145) DG(P4):DC(O144) DG(P5):DC(O143) DA(P6):DT(O142) DT(P7):DA(O141) DG(P8):DC(O140) DT(P9):DA(O139) DA(P10):DT(O138) DT(P11):DA(O137) DA(P12):DT(O136) DT(P13):DA(O135) DA(P14):DT(O134) DT(P15):DA(O133) DC(P16):DG(O132) DT(P17):DA(O131) DG(P18):DC(O130) DA(P19):DT(O129) DC(P20):DG(O128) DA(P21):DT(O127) DC(P22):DG(O126) DG(P23):DC(O125) DT(P24):DA(O124) DG(P25):DC(O123) DC(P26):DG(O122) DC(P27):DG(O121) DT(P28):DA(O120) DG(P29):DC(O119) DG(P30):DC(O118) DA(P31):DT(O117) DG(P32):DC(O116) DA(P33):DT(O115) DC(P34):DG(O114) DT(P35):DA(O113) DA(P36):DT(O112) DG(P37):DC(O111) DG(P38):DC(O110) DG(P39):DC(O109) DA(P40):DT(O108) DG(P41):DC(O107) DT(P42):DT(O105) DA(P44):DT(O104) DT(P45):DA(O103) DC(P46):DG(O102) DC(P47):DG(O101) DC(P48):DG(O100) DC(P49):DG(O99) DT(P50):DA(O98) DT(P51):DA(O97) DG(P52):DC(O96) DG(P53):DC(O95) DC(P54):DG(O94) DG(P55):DC(O93) DG(P56):DC(O92) DT(P57):DA(O91) DT(P58):DA(O90) DA(P59):DT(O89) DA(P60):DT(O88) DA(P61):DT(O87) DA(P62):DT(O86) DC(P63):DG(O85) DG(P64):DC(O84) DC(P65):DG(O83) DG(P66):DC(O82) DG(P67):DC(O81) DG(P68):DC(O79) DG(P69):DC(O78) DA(P71):DT(O77) DC(P72):DG(O76) DA(P73):DT(O75) DG(P74):DC(O74) DC(P75):DG(O73) DG(P76):DC(O72) DC(P77):DG(O71) DG(P78):DC(O70) DT(P79):DA(O69) DA(P80):DT(O68) DC(P81):DG(O67) DG(P82):DC(O66) DT(P83):DA(O65) DG(P84):DC(O64) DC(P85):DG(O63) DG(P86):DC(O62) DT(P87):DA(O60) DT(P89):DA(O59) DA(P90):DT(O58) DA(P91):DT(O57) DG(P92):DC(O56) DC(P93):DG(O55) DG(P94):DC(O54) DG(P95):DC(O53) DT(P96):DA(O52) DG(P97):DC(O51) DC(P98):DG(O50) DT(P99):DA(O49) DA(P100):DT(O48) DG(P101):DC(O47) DA(P102):DT(O46) DG(P103):DC(O45) DC(P104):DG(O44) DT(P105):DA(O43) DG(P106):DC(O42) DT(P107):DA(O41) DC(P108):DG(O40) DT(P109):DA(O39) DA(P110):DT(O38) DC(P111):DG(O37) DG(P112):DC(O36) DA(P113):DT(O35) DC(P114):DG(O34) DC(P115):DG(O33) DA(P116):DT(O31) DT(P118):DA(O30) DT(P119):DA(O29) DG(P120):DC(O28) DA(P121):DT(O27) DG(P122):DC(O26) DC(P123):DG(O25) DG(P124):DC(O24) DG(P125):DC(O23) DC(P126):DG(O22) DC(P127):DG(O21) DT(P128):DA(O20) DC(P129):DG(O19) DG(P130):DC(O18) DG(P131):DC(O17) DC(P132):DG(O16) DA(P133):DT(O15) DC(P134):DG(O14) DC(P135):DG(O13) DG(P136):DC(O12) DG(P137):DC(O11) DG(P138):DC(O10) DA(P139):DT(O9) DT(P140):DA(O8) DT(P141):DA(O7) DC(P142):DG(O6) DT(P143):DA(O5) DC(P144):DG(O4) DG(P145):DC(O3) chainG ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH chainI ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ chainK ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG42 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL chainM ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/kvlRDniqgitkpairrlarrggvkrisGliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/trkesyaiyvykvlkqvhpdtgisskamsiMnsfvndvferiageasrlahynkrstitsreiqtAvrlllpgelakhavsegtkavtkytsa/kphRyRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/kvlRdNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/trkesyaiyvykvlkqvhpdtgisskamsiMnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6w5n_L:Histone-fold; title=CRYO-EM STRUCTURE OF MLL1 IN COMPLEX WITH RBBP5, WDR5, SET1, AND ASH2L BOUND TO THE NUCLEOSOME (CLASS05) organism=? DNA sequence DA(P1):DT(O147) DT(P2):DA(O146) DC(P3):DG(O145) DG(P4):DC(O144) DG(P5):DC(O143) DA(P6):DT(O142) DT(P7):DA(O141) DG(P8):DC(O140) DT(P9):DA(O139) DA(P10):DT(O138) DT(P11):DA(O137) DA(P12):DT(O136) DT(P13):DA(O135) DA(P14):DT(O134) DT(P15):DA(O133) DC(P16):DG(O132) DT(P17):DA(O131) DG(P18):DC(O130) DA(P19):DT(O129) DC(P20):DG(O128) DA(P21):DT(O127) DC(P22):DG(O126) DG(P23):DC(O125) DT(P24):DA(O124) DG(P25):DC(O123) DC(P26):DG(O122) DC(P27):DG(O121) DT(P28):DA(O120) DG(P29):DC(O118) DA(P31):DT(O117) DG(P32):DC(O116) DA(P33):DT(O115) DC(P34):DG(O114) DT(P35):DT(O112) DG(P37):DC(O111) DG(P38):DC(O110) DG(P39):DC(O109) DA(P40):DT(O108) DG(P41):DC(O107) DT(P42):DT(O105) DA(P44):DT(O104) DT(P45):DA(O103) DC(P46):DG(O102) DC(P47):DG(O101) DC(P48):DG(O100) DC(P49):DG(O99) DT(P50):DA(O98) DT(P51):DA(O97) DG(P52):DC(O96) DG(P53):DC(O95) DC(P54):DG(O94) DG(P55):DC(O93) DG(P56):DC(O92) DT(P57):DA(O91) DT(P58):DA(O90) DA(P59):DT(O89) DA(P60):DT(O88) DA(P61):DT(O87) DA(P62):DT(O86) DC(P63):DG(O85) DG(P64):DC(O84) DC(P65):DG(O83) DG(P66):DC(O82) DG(P67):DC(O81) DG(P68):DC(O79) DG(P69):DC(O78) DG(P70):DT(O77) DA(P71):DG(O76) DC(P72):DT(O75) DG(P74):DC(O74) DC(P75):DG(O73) DG(P76):DC(O72) DC(P77):DG(O71) DG(P78):DC(O70) DT(P79):DA(O69) DA(P80):DT(O68) DC(P81):DG(O67) DG(P82):DA(O65) DT(P83):DC(O64) DC(P85):DG(O63) DG(P86):DC(O62) DT(P87):DA(O60) DT(P89):DA(O59) DA(P90):DT(O58) DA(P91):DT(O57) DG(P92):DC(O56) DC(P93):DG(O55) DG(P94):DC(O54) DG(P95):DC(O53) DT(P96):DA(O52) DG(P97):DC(O51) DC(P98):DG(O50) DT(P99):DA(O49) DA(P100):DT(O48) DG(P101):DC(O47) DA(P102):DT(O46) DG(P103):DC(O45) DC(P104):DG(O44) DT(P105):DA(O43) DG(P106):DC(O42) DT(P107):DA(O41) DC(P108):DG(O40) DT(P109):DA(O39) DA(P110):DT(O38) DC(P111):DG(O37) DG(P112):DC(O36) DA(P113):DT(O35) DC(P114):DG(O34) DC(P115):DG(O33) DA(P116):DT(O31) DT(P118):DA(O30) DT(P119):DA(O29) DG(P120):DC(O28) DA(P121):DT(O27) DG(P122):DC(O26) DC(P123):DG(O25) DG(P124):DC(O24) DG(P125):DC(O23) DC(P126):DG(O22) DC(P127):DG(O21) DT(P128):DA(O20) DC(P129):DG(O19) DG(P130):DC(O18) DG(P131):DC(O17) DC(P132):DG(O16) DA(P133):DT(O15) DC(P134):DG(O14) DC(P135):DG(O13) DG(P136):DC(O12) DG(P137):DC(O11) DG(P138):DC(O10) DA(P139):DT(O9) DT(P140):DA(O8) DT(P141):DA(O7) DC(P142):DG(O6) DT(P143):DA(O5) DC(P144):DG(O4) DG(P145):DC(O3) chainL ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >6w5x_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN POLYMERASE ETA COMPLEXED WITH N7- BENZYLGUANINE AND DCTP* organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DT(P3):DA(T10) DG(P4):DC(T9) DT(P5):DA(T8) DG(P6):DC(T7) DA(P7):DT(T6) DG(P8):DC(T5) chainA (373) LEU378 0 0 0 0 0 0 2 0 (377) ARG382 0 0 9 1 0 0 0 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >6w64_A: title=CRYO-EM STRUCTURE OF CAS12I-CRRNA-DSDNA COMPLEX IN I1 STATE organism=LACHNOSPIRACEAE BACTERIUM ND2006 DNA sequence DA(C28) DG(C27) DC(C26) DG(C25) DA(C12) DG(C13) DC(C14) DA(C15) DA(C16) DT(C17) DC(C18) DC(C19) DA(C20) DG(C21) DC(C22) DA(C23) DC(C24):DG(C25) chainA ( 5) ARG12 0 0 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) GLU306 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 (199) SER310 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (207) LYS318 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 (354) ASN477 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 (358) ASN481 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) SER482 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (489) ALA629 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence asetRkayttkmiprshdrmkllgnfmdylmdgtpiffelwnqfgggidrdiisgtankdkisddlllavnwfkvmpinskpqgvspsnlanlfqqysgsepdiqaqeyfasnfdtekhqwkdmrveyerllaelqlsrsdmhhdlklmykekciglslstahyitsvmcmekikaflaskvgpyylgsysamlEnalSpikgmttKnckfvlkqidakndikyenepfgkivegvkwvlhphhigesniktlwedlnaihskyeediaslsedkkekrikvyqgdvcqtintyceevgkeaktplvqllrylysrkddiavdkiidgitflskkhkvekqkinpviqkypsfNfgnNSkllgkiispkdklkhnlkcnrnqvdnyiwieikvlntktmrwekhhyalsstrfleevyypatsyegkpalsaeqieqirsapvglrkvkkrqmrleaarqqnllprytwgkdfninickrgnnfevtlAtkvkkkkeknykvvlgydanivrkntyaaieahangdgvidyndlpvkpiesgfvtvesqvrdksydqlsyngvkllyckphvesrrsflekynmkdfeaiaddetslyyfnmkyckllqssirnhssqakeyreeifellrdgklsvlklsslsnlsfvmfkvaksligtyfghllkkappitdedkqkadpemfalrlaleekrlnkvkskkeviankivakalelrdkygpvlikgenisdttkkgkksstnsflmdwlargvankvkemvmmhqglefvevnpnftshqdpfvhknpentfrarysrctpselteknrkeilsflsdkpskrptnayynegamaflatyglkkndvlgvslekfkqimanilhqrsedqllfpsrggmfylatykldadatsvnwngkqfwvcnadlvaaynvglvdiqkdfkkk >6w89_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF DNMT3A (R882H) IN COMPLEX WITH CGA DNA organism=? DNA sequence DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DG(F428):DC(E441) DA(F429):DT(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DT(F440):DA(E429) DC(F441):DG(E428) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainA ( 88) ILE715 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) VAL716 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) PRO718 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ARG831 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG836 0 0 0 3 13 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER837 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) ASN838 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) GLN846 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvRtiTtRSNsikqgkdQhfpvfmnekedilwctemervfgfpvhytdvsnmshlarqrllgrswsvpvirhlfaplkeyfacv >6w89_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF DNMT3A (R882H) IN COMPLEX WITH CGA DNA organism=HOMO SAPIENS DNA sequence DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DG(F428):DC(E441) DA(F429):DT(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DT(F440):DA(E429) DC(F441):DG(E428) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainA ( 88) ILE715 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) VAL716 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) PRO718 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ARG831 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG836 0 0 0 3 13 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER837 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) ASN838 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) GLN846 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 88) ILE715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 ( 89) VAL716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 ( 91) PRO718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (209) ARG836 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 11 3 0 0 0 0 (211) ASN838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 (219) GLN846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvRtiTtRSNsikqgkdQhfpvfmnekedilwctemervfgfpvhytdvsnmshlarqrllgrswsvpvirhlfaplkeyfacv/aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtittRsNsikqgkdQhfpvfmnekedilwctemervfgfpvhytdvsnmshlarqrllgrswsvpvirhlfaplkeyfacv >6w89_GJ:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF DNMT3A (R882H) IN COMPLEX WITH CGA DNA organism=HOMO SAPIENS DNA sequence DC(K423):DG(L446) DA(K424):DT(L445) DT(K425):DA(L444) DG(K426):DC(L443) DG(K428):DC(L441) DA(K429):DT(L440) DT(K430):DA(L439) DC(K431):DG(L438) DT(K432):DA(L437) DA(K433):DT(L436) DA(K434):DT(L435) DT(K435):DA(L434) DT(K436):DA(L433) DA(K437):DT(L432) DG(K438):DC(L431) DA(K439):DT(L430) DT(K440):DA(L429) DC(K441):DG(L428) DC(K443):DG(L426) DA(K444):DT(L425) DT(K445):DA(L424) DG(K447):DC(L423) chainG ( 87) ILE715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 88) VAL716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 ( 90) PRO718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (206) THR834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (208) ARG836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 14 4 0 0 0 0 (209) SER837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (210) ASN838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 (218) GLN846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chainJ ( 88) ILE715 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) VAL716 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) PRO718 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) THR834 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG836 0 0 0 0 1 8 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) ASN838 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) LYS844 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) GLN846 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTtRSNsikqgkdQhfpvfmnekedilwctemervfgfpvhytdvsnmshlarqrllgrswsvpvirhlfaplkeyfacv/aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTtRsNsikqgKdQhfpvfmnekedilwctemervfgfpvhytdvsnmshlarqrllgrswsvpvirhlfaplkeyfacv >6w8b_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF DNMT3A IN COMPLEX WITH CGA DNA organism=HOMO SAPIENS DNA sequence DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DG(F428):DC(E441) DA(F429):DT(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DT(F440):DA(E429) DC(F441):DG(E428) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainA ( 88) ILE715 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) VAL716 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) PRO718 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) THR834 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG836 0 0 0 6 11 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER837 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) ASN838 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) GLN846 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTtRSNsikqgkdQhfpvfmnekedilwctemervfgfpvhytdvsnmsrlarqrllgrswsvpvirhlfaplkeyfacv >6w8b_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF DNMT3A IN COMPLEX WITH CGA DNA organism=HOMO SAPIENS DNA sequence DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DG(F428):DC(E441) DA(F429):DT(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DT(F440):DA(E429) DC(F441):DG(E428) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainA ( 88) ILE715 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) VAL716 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) PRO718 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) THR834 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG836 0 0 0 6 11 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER837 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) ASN838 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) GLN846 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 88) ILE715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 0 ( 89) VAL716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 ( 91) PRO718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (207) THR834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (209) ARG836 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 11 3 0 0 0 0 (210) SER837 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (211) ASN838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 (219) GLN846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTtRSNsikqgkdQhfpvfmnekedilwctemervfgfpvhytdvsnmsrlarqrllgrswsvpvirhlfaplkeyfacv/aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTtRSNsikqgkdQhfpvfmnekedilwctemervfgfpvhytdvsnmsrlarqrllgrswsvpvirhlfaplkeyfacv >6w8b_HK:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF DNMT3A IN COMPLEX WITH CGA DNA organism=HOMO SAPIENS DNA sequence DA(M424):DT(L445) DT(M425):DA(L444) DG(M426):DC(L443) DG(M428):DC(L441) DA(M429):DT(L440) DT(M430):DA(L439) DC(M431):DG(L438) DT(M432):DA(L437) DA(M433):DT(L436) DA(M434):DT(L435) DT(M435):DA(L434) DT(M436):DA(L433) DA(M437):DT(L432) DG(M438):DC(L431) DA(M439):DT(L430) DT(M440):DA(L429) DC(M441):DG(L428) DC(M443):DG(L426) DA(M444):DT(L425) DT(M445):DA(L424) DG(M446):DC(L423) chainH ( 88) ILE715 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) VAL716 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) PRO718 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) ARG831 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) THR834 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG836 0 0 0 4 10 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER837 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) ASN838 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) GLN846 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 88) ILE715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 0 ( 89) VAL716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 ( 91) PRO718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (207) THR834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (209) ARG836 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 10 2 0 0 0 0 (210) SER837 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (211) ASN838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 (219) GLN846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvRtiTtRSNsikqgkdQhfpvfmnekedilwctemervfgfpvhytdvsnmsrlarqrllgrswsvpvirhlfaplkeyfacv/aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTtRSNsikqgkdQhfpvfmnekedilwctemervfgfpvhytdvsnmsrlarqrllgrswsvpvirhlfaplkeyfacv >6w8d_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF DNMT3A (R882H) IN COMPLEX WITH CGT DNA organism=HOMO SAPIENS DNA sequence DC(E423):DG(F446) DA(E424):DT(F445) DT(E425):DA(F444) DG(E426):DC(F443) PYO(E427):DG(F442) DG(E428):DC(F441) DT(E429):DA(F440) DT(E430):DA(F439) DC(E431):DG(F438) DT(E432):DA(F437) DA(E433):DT(F436) DA(E434):DT(F435) DT(E435):DA(F434) DT(E436):DA(F433) DA(E437):DT(F432) DG(E438):DC(F431) DA(E439):DT(F430) DA(E440):DT(F429) DC(E441):DG(F428) DG(E442):PYO(F427) DC(E443):DG(F426) DA(E444):DT(F425) DT(E445):DA(F424) DG(E446):DC(F423) chainA ( 82) CYS710 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 ( 87) ILE715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 ( 88) VAL716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 9 0 0 0 ( 89) ASN717 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 90) PRO718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 (128) GLU756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 (129) ASN757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (130) VAL758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (162) ARG790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (164) ARG792 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (208) ARG836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 20 0 0 0 0 0 (210) ASN838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 chainD ( 83) CYS710 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ILE715 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) VAL716 0 0 0 18 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) PRO718 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) GLU756 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ASN757 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) VAL758 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ARG790 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ARG792 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG836 0 0 0 2 0 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVNParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtittRsNsikqgkdqhfpvfmnekedilwctemervfgfpvhytdvsnmshlarqrllgrswsvpvirhlfaplkeyfacv/aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtittRsnsikqgkdqhfpvfmnekedilwctemervfgfpvhytdvsnmshlarqrllgrswsvpvirhlfaplkeyfacv >6w8d_D:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF DNMT3A (R882H) IN COMPLEX WITH CGT DNA organism=HOMO SAPIENS DNA sequence DC(F423):DG(E446) DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) PYO(F427):DG(E442) DG(F428):DC(E441) DT(F429):DA(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DA(F440):DT(E429) DC(F441):DG(E428) DG(F442):PYO(E427) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainD ( 83) CYS710 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 ( 88) ILE715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 ( 89) VAL716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 1 9 0 0 0 ( 91) PRO718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 (129) GLU756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 (130) ASN757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (131) VAL758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (163) ARG790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (165) ARG792 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 (209) ARG836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 26 0 1 0 0 0 prot.sequence aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtittRsnsikqgkdqhfpvfmnekedilwctemervfgfpvhytdvsnmshlarqrllgrswsvpvirhlfaplkeyfacv >6w8j_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF DNMT3A (R882H) IN COMPLEX WITH CAG DNA organism=HOMO SAPIENS DNA sequence DC(E423):DG(F446) DA(E424):DT(F445) DT(E425):DA(F444) DG(E426):DC(F443) DA(E428):DT(F441) DG(E429):DC(F440) DT(E430):DA(F439) DC(E431):DG(F438) DT(E432):DA(F437) DA(E433):DT(F436) DA(E434):DT(F435) DT(E435):DA(F434) DT(E436):DA(F433) DA(E437):DT(F432) DG(E438):DC(F431) DA(E439):DT(F430) DC(E440):DG(F429) DT(E441):DA(F428) DC(E443):DG(F426) DA(E444):DT(F425) DT(E445):DA(F424) DG(E446):DC(F423) chainA ( 87) ILE715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 ( 88) VAL716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 ( 90) PRO718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (208) ARG836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 4 0 0 0 0 (210) ASN838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 prot.sequence ekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTtRsNsikqgkdqhfpvfmnekedilwctemervfgfpvhytdvsnmshlarqrllgrswsvpvirhlfaplkeyfacv >6w8j_AD:S-adenosyl-L-methionine-dependent_methyltransferases; title=STRUCTURE OF DNMT3A (R882H) IN COMPLEX WITH CAG DNA organism=HOMO SAPIENS DNA sequence DC(F423):DG(E446) DA(F424):DT(E445) DT(F425):DA(E444) DG(F426):DC(E443) DA(F428):DT(E441) DG(F429):DC(E440) DT(F430):DA(E439) DC(F431):DG(E438) DT(F432):DA(E437) DA(F433):DT(E436) DA(F434):DT(E435) DT(F435):DA(E434) DT(F436):DA(E433) DA(F437):DT(E432) DG(F438):DC(E431) DA(F439):DT(E430) DC(F440):DG(E429) DT(F441):DA(E428) DC(F443):DG(E426) DA(F444):DT(E425) DT(F445):DA(E424) DG(F446):DC(E423) chainA ( 87) ILE715 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) VAL716 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) PRO718 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) ARG836 0 0 0 0 4 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) ASN838 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 88) ILE715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 ( 89) VAL716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 ( 91) PRO718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (209) ARG836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 (210) SER837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (211) ASN838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (256) LEU883 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence ekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtiTtRsNsikqgkdqhfpvfmnekedilwctemervfgfpvhytdvsnmshlarqrllgrswsvpvirhlfaplkeyfacv/aekrkpirvlslfdgiatgllvlkdlgiqvdryiasevcedsitvgmvrhqgkimyvgdvrsvtqkhiqewgpfdlviggspcndlsIVnParkglyegtgrlffefyrllhdarpkegddrpffwlfenvvamgvsdkrdisrflesnpvmidakevsaahraryfwgnlpgmnrplastvndklelqeclehgriakfskvrtittRSNsikqgkdqhfpvfmnekedilwctemervfgfpvhytdvsnmshLarqrllgrswsvpvirhlfaplkeyfacv >6w8v_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF MOUSE DNMT1 IN COMPLEX WITH ACG DNA organism=Mus musculus DNA sequence DC(E1):DG(F24) DC(E2):DG(F23) DT(E3):DA(F22) DT(E4):DA(F21) DC(E5):DG(F20) 5CM(E6):DG(F19) DG(E7):C49(F18) DT(E8):DA(F17) DA(E9):DT(F16) DA(E10):DT(F15) DG(E11):DC(F14) DT(E12):DA(F13) chainB (240) LYS985 0 0 0 0 0 0 0 3 0 0 0 0 (458) CYS1229 0 0 0 0 0 0 15 0 0 0 0 0 (464) MET1235 0 0 0 0 0 2 0 7 0 0 0 0 (466) ARG1237 0 0 0 0 1 18 0 0 0 0 0 0 (494) GLU1269 0 0 0 0 0 0 11 0 0 0 0 0 (538) ARG1313 0 0 0 0 0 0 8 0 0 0 0 0 (540) ARG1315 0 0 0 0 0 0 11 0 0 0 0 0 (726) CYS1501 0 0 0 0 0 2 0 0 0 0 0 0 (727) LEU1502 0 0 0 0 0 2 0 0 0 0 0 0 (735) ASN1510 0 0 0 0 0 0 0 0 1 8 0 0 (737) TRP1512 0 0 0 0 0 44 0 0 0 0 0 0 (758) GLU1533 0 0 0 4 0 0 0 0 0 0 0 0 (762) LYS1537 0 0 0 0 0 46 0 10 0 0 0 0 (805) ASN1580 0 0 0 0 0 0 3 0 0 0 0 0 prot.sequence driswlgqpmkieenrtyyqkvsideemlevgdcvsvipddsskplylarvtalwedkngqmmfhahwfcagtdtvlgatsdplelflvgecenmqlsyihskvkviykapsenwameggtyffqlwynqeyarfesppktqptednkhkfclscirlaelrqkempkvleqieevdgrvycssitkngvvyrlgdsvylppeaftfnikvaspvkrpkkdpvnetlypehyrkysdyiKgsnldapepyrigrikeihcgkkkgkvneadiklrlykfyrpenthrsyngsyhtdinmlywsdeeavvnfsdvqgrctveygedllesiqdysqggpdrfyfleaynsktknfedppnharspgnklpklrtldvfsgcgglsegfhqagisetlwaiemwdpaaqafrlnnpgttvftedcnvllklvmagevtnslgqrlpqkgdvemlcggppcqgfsgMnRfnskfknslvvsflsycdyyrprffllenvrnfvsyrrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapracqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpeiqngasnseipyngeplswfqrqlrgshyqpilrdhickdmsplvaarmrhiplfpgsdwrdlpniqvrlgdgviahklqytfhdvkngysstgalrgvcscaegkacdpesrqfstlipwclphtgnrhNhwaglygrlewdgffsttvtnpEpmgKqgrvlhpeqhrvvsvrecarsqgfpdsyrffgnildrhrqvgnavppplakaigleiklclls >6waa_BD:Type_II_DNA_topoisomerase; title=K. PNEUMONIAE TOPOISOMERASE IV (PARE-PARC) IN COMPLEX WITH DNA AND COMPOUND 34 (7-[(1S,5R)-1-AMINO-3-AZABICYCLO[3.1.0]HEXAN-3-YL]-4- (AMINOMETHYL)-1-CYCLOPROPYL-3,6-DIFLUORO-8-METHYLQUINOLIN-2(1H)-ONE) organism=KLEBSIELLA PNEUMONIAE 342 DNA sequence DT(L2):DA(K25) DA(L3):DT(K24) DC(L4):DC(K22) DT(L6):DA(K21) DT(L7):DA(K20) DG(L8):DC(K19) DT(L9):DA(K18) DA(L10):DT(K17) DT(L11):DA(K16) DG(J12):DC(K15) DA(J13):DT(K14) DT(J14):DA(K13) DC(J15):DG(K12) DA(J16):DT(I11) DT(J17):DA(I10) DA(J18):DT(I9) DC(J19):DG(I8) DA(J20):DT(I7) DA(J21):DT(I6) DC(J22):DG(I5) DG(J23):DC(I4) DT(J24):DA(I3) chainB ( 45) LYS444 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 2 0 0 0 0 0 0 (250) ARG1029 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (301) SER1080 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (302) ALA1081 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 (305) GLU1084 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (392) ILE1172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 16 0 0 0 0 (546) ARG1326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 chainD ( 47) LYS444 0 0 0 0 0 0 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS610 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) TYR1021 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) SER1080 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (271) ALA1081 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) ILE1172 0 0 0 0 19 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (481) ARG1326 0 0 2 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gkladctaqdlnrtelflvegdsaggsakqardreyqaimplkgKilntwevssdevlasqevhdisvaigidpdsddlsqlrygkiciladadsdglhiatllcalfvrhfrtlvkeghvyvalpplyridlgkevyyalteeektgvleqlkrkkgkpnvqrfkglgemnpmqlrettldpntrrlvqlvisdedeqqttaimdmllakkrsedrrnwlqekgaerlalheftenaylnysmyvimdRalpfigdglkpvqrrivyamselglnasakfkksartvgdvlgkyhphgdSAcyEamvlmaqpfsyryplvdgqgnwgapddpksfaamrtesrlskyaelllselgqgtvdwvpnfdgtlqepkmlparlpnillngttgIavgmatdipphnlrevakaaitlieqpkttldelldivqgpdfpteaeiitsraeirkiyqngrgsvrmravwskedgavvitalphqvsgakvleqiaaqmrnkklpmvddlrdesdhenptrlvivprsnrvdmeqvmnhlfattdleksyRinlnmigldgrpavknlleilsewlvfrrdtvrrrlnhrlekvlkrlhilegllvaflnidevieiirtedepkpalmsrfgisetqaeailelklrhlakleemkirgeqselekerdqlqailaserkmnnllkkelqadadafgddrrsplh/lpgkladctaqdlnrtelflvegdsaggsakqardreyqaimplkgKilntwevssdevlasqevhdisvaigidpdsdygkiciladadsdglhiatllcalfvrhfrtlvkeghvyvalpplyalteeektgvrfkglgemnpmqlrettldpntrrlvqlisdedeqqttaimdmllaKkrsedrrnwlqekgrlalheftenaylnYsmyvimdralpfigdglkpvqrrivyamselglnasakfkksartvgdvlgkyhphgdSAcyeamvlmaqpfsyryplvdgqgnwgapddpksfaamrtesrlskyaelllselgqgtvdwvpnfdgtlqepkmlparlpnillngttgIavgmatdipphnlrevakaaitlieqpkttldelldivqgpdfpteaeiitsraeirkiyqngrgsvrmravalphqvsgakvleqiaaqmrnkklpmvddmeqvmnhlfattdleksyRinlnmigldgrpavknlleilsewlvfrrdtvrrrlnhrlekvlkrlhilegllvaflnidevieiirtedepkpalmsrfgisetqaeailelklrhlakleemkirgeqselekerdqlqailaserkmnnllkkelqadadafgddrrsplh >6waa_D:Type_II_DNA_topoisomerase; title=K. PNEUMONIAE TOPOISOMERASE IV (PARE-PARC) IN COMPLEX WITH DNA AND COMPOUND 34 (7-[(1S,5R)-1-AMINO-3-AZABICYCLO[3.1.0]HEXAN-3-YL]-4- (AMINOMETHYL)-1-CYCLOPROPYL-3,6-DIFLUORO-8-METHYLQUINOLIN-2(1H)-ONE) organism=KLEBSIELLA PNEUMONIAE 342 DNA sequence DA(I3):DT(J24) DC(I4):DG(J23) DG(I5):DC(J22) DT(I6):DA(J21) DT(I7):DA(J20) DG(I8):DC(J19) DT(I9):DA(J18) DA(I10):DT(J17) DT(I11):DA(J16) DG(K12):DC(J15) DA(K13):DT(J14) DT(K14):DA(J13) DC(K15):DG(J12) DA(K16):DT(L11) DT(K17):DA(L10) DA(K18):DT(L9) DC(K19):DG(L8) DA(K20):DT(L7) DA(K21):DT(L6) DC(K22):DC(L4) DT(K24):DA(L3) DA(K25):DT(L2) chainD ( 47) LYS444 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 0 0 0 0 0 0 (182) LYS610 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (211) TYR1021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (270) SER1080 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (271) ALA1081 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 (361) ILE1172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 19 0 0 0 0 (481) ARG1326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 2 0 0 prot.sequence lpgkladctaqdlnrtelflvegdsaggsakqardreyqaimplkgKilntwevssdevlasqevhdisvaigidpdsdygkiciladadsdglhiatllcalfvrhfrtlvkeghvyvalpplyalteeektgvrfkglgemnpmqlrettldpntrrlvqlisdedeqqttaimdmllaKkrsedrrnwlqekgrlalheftenaylnYsmyvimdralpfigdglkpvqrrivyamselglnasakfkksartvgdvlgkyhphgdSAcyeamvlmaqpfsyryplvdgqgnwgapddpksfaamrtesrlskyaelllselgqgtvdwvpnfdgtlqepkmlparlpnillngttgIavgmatdipphnlrevakaaitlieqpkttldelldivqgpdfpteaeiitsraeirkiyqngrgsvrmravalphqvsgakvleqiaaqmrnkklpmvddmeqvmnhlfattdleksyRinlnmigldgrpavknlleilsewlvfrrdtvrrrlnhrlekvlkrlhilegllvaflnidevieiirtedepkpalmsrfgisetqaeailelklrhlakleemkirgeqselekerdqlqailaserkmnnllkkelqadadafgddrrsplh >6waa_FH:Type_II_DNA_topoisomerase; title=K. PNEUMONIAE TOPOISOMERASE IV (PARE-PARC) IN COMPLEX WITH DNA AND COMPOUND 34 (7-[(1S,5R)-1-AMINO-3-AZABICYCLO[3.1.0]HEXAN-3-YL]-4- (AMINOMETHYL)-1-CYCLOPROPYL-3,6-DIFLUORO-8-METHYLQUINOLIN-2(1H)-ONE) organism=KLEBSIELLA PNEUMONIAE 342 DNA sequence DA(P3):DT(O24) DC(P4):DG(O23) DG(P5):DC(O22) DT(P6):DA(O21) DT(P7):DA(O20) DG(P8):DC(O19) DT(P9):DA(O18) DA(P10):DT(O17) DT(P11):DA(O16) DG(N12):DC(O15) DA(N13):DT(O14) DT(N14):DA(O13) DC(N15):DG(O12) DA(N16):DT(M11) DT(N17):DA(M10) DA(N18):DT(M9) DC(N19):DG(M8) DA(N20):DT(M7) DA(N21):DT(M6) DC(N22):DG(M5) DG(N23):DC(M4) DT(N24):DA(M3) DA(N25):DT(M2) DA(N26):DT(M1) chainF ( 45) LYS444 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 3 0 0 0 0 0 0 0 0 (244) TYR1021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (252) ARG1029 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (303) SER1080 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (304) ALA1081 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 (307) GLU1084 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (394) ILE1172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 17 0 0 0 0 0 0 (548) ARG1326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 chainH ( 49) LYS444 0 0 0 0 0 0 4 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) LYS610 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) SER1080 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) ALA1081 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) GLU1084 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) ARG1119 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (369) ILE1172 0 0 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (500) ARG1326 0 0 6 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gkladctaqdlnrtelflvegdsaggsakqardreyqaimplkgKilntwevssdevlasqevhdisvaigidpdsddlsqlrygkiciladadsdglhiatllcalfvrhfrtlvkeghvyvalpplyridlgkevyyalteeektgvleqlkrkkgkpnvqrfkglgemnpmqlrettldpntrrlvqlvisdedeqqttaimdmllakkrsedrrnwlqekgdmaerlalheftenaylnYsmyvimdRalpfigdglkpvqrrivyamselglnasakfkksartvgdvlgkyhphgdSAcyEamvlmaqpfsyryplvdgqgnwgapddpksfaamrtesrlskyaelllselgqgtvdwvpnfdgtlqepkmlparlpnillngttgIavgmatdipphnlrevakaaitlieqpkttldelldivqgpdfpteaeiitsraeirkiyqngrgsvrmravwskedgavvitalphqvsgakvleqiaaqmrnkklpmvddlrdesdhenptrlvivprsnrvdmeqvmnhlfattdleksyRinlnmigldgrpavknlleilsewlvfrrdtvrrrlnhrlekvlkrlhilegllvaflnidevieiirtedepkpalmsrfgisetqaeailelklrhlakleemkirgeqselekerdqlqailaserkmnnllkkelqadadafgddrrsplhere/palpgkladctaqdlnrtelflvegdsaggsakqardreyqaimplkgKilntwevssdevlasqevhdisvaigidpdsddlsqlrygkiciladadsdglhiatllcalfvrhfrtlvkeghvyvalpplyriyyalrfkglgemnpmqlrettldpntrrlvqlvisdedeqqttaimdmllaKkrsedrrnwlqekgdmerlalheftenaylnysmyvimdralpfigdglkpvqrrivyamselglnasakfkksartvgdvlgkyhphgdSAcyEamvlmaqpfsyryplvdgqgnwgapddpksfaamRtesrlskyaelllselgqgtvdwvpnfdgtlqepkmlparlpnillngttgIavgmatdipphnlrevakaaitlieqpkttldelldivqgpdfpteaeiitsraeirkiyqngrgsvrmravwvitalphqvsgakvleqiaaqmrnkklpmvsdhenptrlmeqvmnhlfattdleksyRinlnmigldgrpavknlleilsewlvfrrdtvrrrlnhrlekvlkrlhilegllvaflnidevieiirtedepkpalmsrfgisetqaeailelklrhlakleemkirgeqselekerdqlqailaserkmnnllkkelqadadafgddrrsplh >6wbr_A: title=CRYSTAL STRUCTURE OF ACECAS9 BOUND WITH GUIDE RNA AND DNA WITH 5'- NNNCC-3' PAM organism=? DNA sequence DC(C-10):DG(D10) DG(C-9):DC(D9) DC(C-8):DG(D8) DC(C-7):DG(D7) DA(C-6):DT(D6) DG(C-5):DC(D5) DG(C-4):DC(D4) DT(C-3):DA(D3) DA(C-2):DT(D2) DT(C-1):DA(D1) chainA ( 49) ARG55 0 0 0 0 0 0 0 0 0 29 (852) GLU1044 0 0 0 0 0 0 7 2 0 0 (855) LYS1047 0 2 2 0 0 0 0 0 0 0 (856) ARG1048 0 0 0 4 5 1 0 0 0 0 (896) ARG1088 0 0 0 0 0 3 6 2 2 0 (899) ARG1091 0 0 0 0 6 10 3 0 0 0 prot.sequence gtvpvtwrlgvdvgersiglaavsyeedkpkeilaavswihdggvgdeRsgasrlalrgmarrarrlrrfrrarlrdldmllselgwtplpdknvspvdawlarkrlaeeyvvdeterrrllgyavshmarhrgwrnpwttikdlknlpqpsdswertreslearysvslepgtvgqwagyllqrapgirlnptqqslsnatafetrlrqedvlwelrciadvqglpedvvsnvidavfcqkrpsvpaerigrdpldpsqlrasraclefqeyrivaavanlrirdgsgsrplsleernavieallaqtersltwsdialeilklpnesdltsvpeedgpsslaysqfapfdetsariaefiaknrrkiptfaqwwqeqdrtsrsdlvaaladnsiagllvhlpdaelealeglalpsgrvaysrltlsgltrvmrddgvdvhnarktcfgvddnwrpplpalheatghpvvdrnlailrkflssatmrwgppqsivvelgsaggyaavalrdrllsygekngvaqvavfrggvtaearrwldisierlfsrvaifaqststkrldrrhhavdavvlttltpgvaktladarsrrvsasteepqspayrqwkescsglgdllistaardsiavaaplrlrptgalheetlrafsehtvgaawkgaelrrivepevyaaflaltdpggrflkvspsedvlpadenrhivlsdrvlgprdrvklfpddrgsirvrggaayiasfhharvfrwgsshspsfallrvsladlavagllrdgvdvftaelppwtpawryasialvkavesgdakqvgwlvpgdeldfgpegvttaagdlsmflkyfperhwvvtgfEddKRinlkpaflsaeqaevlrtersdrpdtlteageilaqffpRcwRatvakvlchpgltvirrtalgqprwrrghlpyswrpwsadpws >6wc0_A: title=CRYSTAL STRUCTURE OF ACECAS9 BOUND WITH GUIDE RNA AND DNA WITH 5'- NNNTC-3' PAM organism=? DNA sequence DC(C-10):DG(D10) DG(C-9):DC(D9) DC(C-8):DG(D8) DC(C-7):DG(D7) DA(C-6):DT(D6) DG(C-5):DC(D5) DA(C-4):DT(D4) DT(C-3):DA(D3) DA(C-2):DT(D2) DT(C-1):DA(D1) chainA ( 49) ARG55 0 0 0 0 0 0 0 0 0 28 (849) GLU1044 0 0 0 0 0 0 4 0 0 0 (893) ARG1088 0 0 0 0 5 16 5 0 0 0 (896) ARG1091 0 0 0 0 8 1 0 0 0 0 prot.sequence gtvpvtwrlgvdvgersiglaavsyeedkpkeilaavswihdggvgdeRsgasrlalrgmarrarrlrrfrrarlrdldmllselgwtplpdknvspvdawlarkrlaeeyvvdeterrrllgyavshmarhrgwrnpwttikdlknlpqpsdswertreslearysvslepgtvgqwagyllqrapgirlnptqqslsnatafetrlrqedvlwelrciadvqglpedvvsnvidavfcqkrpsvpaerigrdpldpsqlrasraclefqeyrivaavanlrirdgsgsrplsleernavieallaqtersltwsdialeilklpnesdltsvpeedgpsslaysqfapfdetsariaefiaknrrkiptfaqwwqeqdrtsrsdlvaaladnsiaghlpdaelealeglalpsgrvaysrltlsgltrvmrddgvdvhnarktcfgvddnwrpplpalheatghpvvdrnlailrkflssatmrwgppqsivvelgsaggyaavalrdrllsygekngvaqvavfrggvtaearrwldisierlfsrvaifaqststkrldrrhhavdavvlttltpgvaktladarsrrvsasteepqspayrqwkescsglgdllistaardsiavaaplrlrptgalheetlrafsehtvgaawkgaelrrivepevyaaflaltdpggrflkvspsedvlpadenrhivlsdrvlgprdrvklfpddrgsirvrggaayiasfhharvfrwgsshspsfallrvsladlavagllrdgvdvftaelppwtpawryasialvkavesgdakqvgwlvpgdeldfgpegvttaagdlsmflkyfperhwvvtgfEddkrinlkpaflsaeqaevlrtersdrpdtlteageilaqffpRcwRatvakvlchpgltvirrtalgqprwrrghlpyswrpwsadpw >6wc2_ABO:SRF-like; title=CRYSTAL STRUCTURE OF A TERNARY MEF2 CHIMERA/NKX2-5/MYOCARDIN ENHANCER DNA COMPLEX organism=HOMO SAPIENS DNA sequence DA(K1):DT(L21) DA(K2):DT(L20) DG(K3):DC(L19) DC(K4):DG(L18) DA(K5):DT(L17) DC(K6):DG(L16) DT(K7):DA(L15) DT(K8):DA(L14) DT(K9):DA(L13) DC(K10):DG(L12) DT(K11):DA(L11) DT(K12):DA(L10) DA(K13):DT(L9) DA(K14):DT(L8) DA(K15):DT(L7) DA(K16):DT(L6) DT(K17):DA(L5) DA(K18):DT(L4) DG(K19):DC(L3) DT(K20):DA(L2) DG(K21):DC(L1) chainA ( 2) ARG3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 4 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 1 0 chainB ( 19) LYS23 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 chainO ( 42) ILE184 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN187 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ASN188 0 0 0 0 0 1 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR191 0 0 0 0 2 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) LYS192 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntdiletlkrre/kiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntdiletlkrre/vlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYKskr >6wc2_DM:SRF-like; title=CRYSTAL STRUCTURE OF A TERNARY MEF2 CHIMERA/NKX2-5/MYOCARDIN ENHANCER DNA COMPLEX organism=HOMO SAPIENS DNA sequence DC(H1):DG(G21) DA(H2):DT(G20) DC(H3):DG(G19) DT(H4):DA(G18) DA(H5):DT(G17) DT(H6):DA(G16) DT(H7):DA(G15) DT(H8):DA(G14) DT(H9):DA(G13) DA(H10):DT(G12) DA(H11):DT(G11) DG(H12):DC(G10) DA(H13):DT(G9) DA(H14):DT(G8) DA(H15):DT(G7) DG(H16):DC(G6) DT(H17):DA(G5) DG(H18):DC(G4) DC(H19):DG(G3) DT(H20):DA(G2) DT(H21):DA(G1) chainD ( 2) ARG3 0 0 4 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ARG15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL19 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 4 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 1) ARG142 0 0 0 0 0 0 0 0 0 0 0 3 5 9 0 0 0 0 0 0 0 ( 43) ILE184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 46) GLN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 ( 47) ASN188 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 1 0 0 0 0 0 ( 50) TYR191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 prot.sequence gRkkiqitrimdeRnrqVtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntdiletlkrrehr/RvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYkskr >6wc2_IJN:SRF-like; title=CRYSTAL STRUCTURE OF A TERNARY MEF2 CHIMERA/NKX2-5/MYOCARDIN ENHANCER DNA COMPLEX organism=HOMO SAPIENS DNA sequence DA(E1):DT(F21) DA(E2):DT(F20) DG(E3):DC(F19) DC(E4):DG(F18) DA(E5):DT(F17) DC(E6):DG(F16) DT(E7):DA(F15) DT(E8):DA(F14) DT(E9):DA(F13) DC(E10):DG(F12) DT(E11):DA(F11) DT(E12):DA(F10) DA(E13):DT(F9) DA(E14):DT(F8) DA(E15):DT(F7) DA(E16):DT(F6) DT(E17):DA(F5) DA(E18):DT(F4) DG(E19):DC(F3) DT(E20):DA(F2) DG(E21):DC(F1) chainI ( 2) ARG3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 8 0 0 chainJ ( 2) ARG3 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 18) VAL19 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 8 5 1 0 0 0 0 0 0 0 0 0 0 chainN ( 1) ARG142 0 0 0 0 0 0 0 8 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 43) ILE184 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) GLN187 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN188 0 0 0 0 0 1 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) TYR191 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqitrimdernrqvtftkrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntdiletlkrre/gRkkiqitrimdernrqVtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntdiletlkrreh/RvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvKIwfQNrrYksk >6wc2_N:Homeodomain-like; title=CRYSTAL STRUCTURE OF A TERNARY MEF2 CHIMERA/NKX2-5/MYOCARDIN ENHANCER DNA COMPLEX organism=? DNA sequence DA(E1):DT(F21) DA(E2):DT(F20) DG(E3):DC(F19) DC(E4):DG(F18) DA(E5):DT(F17) DC(E6):DG(F16) DT(E7):DA(F15) DT(E8):DA(F14) DT(E9):DA(F13) DC(E10):DG(F12) DT(E11):DA(F11) DT(E12):DA(F10) DA(E13):DT(F9) DA(E14):DT(F8) DA(E15):DT(F7) DA(E16):DT(F6) DT(E17):DA(F5) DA(E18):DT(F4) DG(E19):DC(F3) DT(E20):DA(F2) DG(E21):DC(F1) chainN ( 1) ARG142 0 0 0 0 0 0 0 8 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 43) ILE184 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) GLN187 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN188 0 0 0 0 0 1 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) TYR191 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvKIwfQNrrYksk >6wc5_ABI:SRF-like; title=CRYSTAL STRUCTURE OF A TERNARY MEF2B/NKX2-5/MYOCARDIN ENHANCER DNA COMPLEX organism=HOMO SAPIENS DNA sequence DC(F1):DG(E21) DA(F2):DT(E20) DC(F3):DG(E19) DT(F4):DA(E18) DA(F5):DT(E17) DT(F6):DA(E16) DT(F7):DA(E15) DT(F8):DA(E14) DT(F9):DA(E13) DA(F10):DT(E12) DA(F11):DT(E11) DG(F12):DC(E10) DA(F13):DT(E9) DA(F14):DT(E8) DA(F15):DT(E7) DG(F16):DC(E6) DT(F17):DA(E5) DG(F18):DC(E4) DC(F19):DG(E3) DT(F20):DA(E2) DT(F21):DA(E1) chainA ( 2) ARG3 0 0 9 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 1 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) ARG3 0 0 0 0 0 0 0 0 0 1 7 7 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 chainI ( 43) ILE184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 46) GLN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 ( 47) ASN188 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 1 0 0 0 0 0 ( 50) TYR191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 2 0 0 0 0 ( 51) LYS192 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 54) ARG195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkr/gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr/rvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYKskRq >6wc5_CDN:SRF-like; title=CRYSTAL STRUCTURE OF A TERNARY MEF2B/NKX2-5/MYOCARDIN ENHANCER DNA COMPLEX organism=HOMO SAPIENS DNA sequence DA(G1):DT(H21) DA(G2):DT(H20) DG(G3):DC(H19) DC(G4):DG(H18) DA(G5):DT(H17) DC(G6):DG(H16) DT(G7):DA(H15) DT(G8):DA(H14) DT(G9):DA(H13) DC(G10):DG(H12) DT(G11):DA(H11) DT(G12):DA(H10) DA(G13):DT(H9) DA(G14):DT(H8) DA(G15):DT(H7) DA(G16):DT(H6) DT(G17):DA(H5) DA(G18):DT(H4) DG(G19):DC(H3) DT(G20):DA(H2) DG(G21):DC(H1) DG(G22):DC(H0) chainC ( 2) ARG3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 13 6 0 0 0 ( 14) ARG15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 22) LYS23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 5 1 0 0 chainD ( 2) ARG3 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL19 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 chainN ( 3) ARG142 0 0 0 0 0 0 0 8 7 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) LYS183 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ILE184 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) GLN187 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ASN188 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) TYR191 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gRkkiqisrildqRnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr/gRkkiqisrildqrnrqVtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr/kpRvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvKIwfQNrrYksk >6wc5_I:Homeodomain-like; title=CRYSTAL STRUCTURE OF A TERNARY MEF2B/NKX2-5/MYOCARDIN ENHANCER DNA COMPLEX organism=HOMO SAPIENS DNA sequence DC(F1):DG(E21) DA(F2):DT(E20) DC(F3):DG(E19) DT(F4):DA(E18) DA(F5):DT(E17) DT(F6):DA(E16) DT(F7):DA(E15) DT(F8):DA(E14) DT(F9):DA(E13) DA(F10):DT(E12) DA(F11):DT(E11) DG(F12):DC(E10) DA(F13):DT(E9) DA(F14):DT(E8) DA(F15):DT(E7) DG(F16):DC(E6) DT(F17):DA(E5) DG(F18):DC(E4) DC(F19):DG(E3) DT(F20):DA(E2) DT(F21):DA(E1) chainI ( 43) ILE184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 46) GLN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 ( 47) ASN188 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 1 0 0 0 0 0 ( 50) TYR191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 2 0 0 0 0 ( 51) LYS192 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 54) ARG195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence rvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYKskRq >6wdz_A: title=PORCINE CIRCOVIRUS 2 REP DOMAIN COMPLEXED WITH A SINGLE-STRANDED DNA 10-MER COMPRISING THE CLEAVAGE SITE organism=? DNA sequence DT(C302):DA(C306) DA(C303):DT(C305) chainA ( 9) THR20 8 0 ( 11) ASN22 3 4 ( 71) HIS82 49 0 ( 73) GLU84 6 0 prot.sequence qphkrwvfTlNnpsederkkirdlpislfdyfivgeegneegrtphlqgfanfvkkqtfnkvkwylgarcHiEkakgtdqqnkefcskegnllmecgaprs >6we1_AD:Origin_of_replication-binding_domain,_RBD-like; title=WHEAT DWARF VIRUS REP DOMAIN COMPLEXED WITH A SINGLE-STRANDED DNA 8- MER COMPRISING THE CLEAVAGE SITE organism=Wheat dwarf virus DNA sequence DA(F300):DT(C304) DT(C305):DA(C303) DA(C306):DT(C302) DA(F303):DA(C301) chainA ( 12) THR19 0 0 6 0 ( 14) PRO21 0 2 8 0 ( 81) HIS91 0 0 1 5 ( 83) ASN93 0 0 28 8 ( 85) GLN95 0 0 3 0 chainD ( 1) PHE9 30 0 0 0 ( 63) PRO75 3 0 0 0 ( 79) HIS91 6 0 0 0 ( 81) ASN93 5 0 0 0 ( 82) ILE94 4 0 0 0 ( 83) GLN95 0 3 0 0 prot.sequence rfrvyskylflTyPqctlepqyaldslrtllnkyeplyiaavrelhsphlhvlvqnklrasitnpnalnlrmdtspfsifHpNiQaakdcnqvrdfitkevsdvntaewgtfvavs/FrvyskylfltypqctlepqyaldslrtllnkyeplyiaavrelsphlhvlvqnklrasitnPnalnlrmdtspfsifHpNIQaakdcnqvrdfitkevsdvntaewgtfvav >6we1_D:Origin_of_replication-binding_domain,_RBD-like; title=WHEAT DWARF VIRUS REP DOMAIN COMPLEXED WITH A SINGLE-STRANDED DNA 8- MER COMPRISING THE CLEAVAGE SITE organism=Wheat dwarf virus DNA sequence DA(C300):DT(F304) DA(C301):DA(F303) DT(C302):DA(C306) DA(C303):DT(C305) DT(C304):DA(F300) chainD ( 1) PHE9 0 0 0 0 30 ( 63) PRO75 0 0 0 0 3 ( 79) HIS91 0 0 0 0 6 ( 81) ASN93 0 0 0 0 5 ( 82) ILE94 0 0 0 0 4 ( 83) GLN95 0 0 0 3 0 prot.sequence FrvyskylfltypqctlepqyaldslrtllnkyeplyiaavrelsphlhvlvqnklrasitnPnalnlrmdtspfsifHpNIQaakdcnqvrdfitkevsdvntaewgtfvav >6we9_A: title=YTH DOMAIN OF HUMAN YTHDC1 WITH 11MER SSDNA CONTAINING N6MA organism=Homo sapiens DNA sequence DC(B1) DG(B2) DC(B3) DG(B4) DG(B5) DC(B7) DT(B8) DC(B9) DT(B10) DG(B11) chainA ( 37) LEU380 0 0 0 0 7 0 0 0 0 0 ( 38) PRO381 0 0 0 0 12 0 0 0 0 0 ( 95) MET438 0 0 0 0 5 0 0 0 0 0 (129) LYS472 0 0 0 0 0 0 0 2 0 0 (130) ILE473 0 0 0 0 0 2 5 3 0 0 (132) ARG475 0 0 0 0 0 29 0 0 0 0 prot.sequence gtsklkyvlqdarffliksnnhenvslakakgvwstLPvnekklnlafrsarsvilifsvresgkfqgfarlsseshhggspihwvlpagmsakMlggvfkidwicrrelpftksahltnpwNehKpvKIgRdgqeielecgtqlcllfppdesidlyqvihkm >6wea_A: title=YTH DOMAIN OF HUMAN YTHDC1 WITH A 10MER OLIGO CONTAINING N6MA organism=Homo sapiens DNA sequence DC(E1) DG(E2) DC(E3) DG(E4) DG(E5) DC(E7) DT(E8) DT(E9):DC(E10) chainA ( 36) LEU380 0 0 0 0 6 0 0 0 ( 37) PRO381 0 0 0 0 10 0 0 0 ( 94) MET438 0 0 0 0 10 0 0 0 (129) ILE473 0 0 0 0 0 2 4 0 (131) ARG475 0 0 0 0 0 26 0 0 prot.sequence tsklkyvlqdarffliksnnhenvslakakgvwstLPvnekklnlafrsarsvilifsvresgkfqgfarlsseshhggspihwvlpagmsakMlggvfkidwicrrelpftksahltnpwNehKpvkIgRdgqeielecgtqlcllfppdesidlyqvihkm >6wfq_CD:GntR_ligand-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=NANR DIMER-DNA HETERO-COMPLEX organism=ESCHERICHIA COLI DNA sequence DT(B1):DA(A15) DA(B2):DT(A14) DT(B3):DA(A13) DA(B4):DT(A12) DC(B5):DG(A11) DC(B6):DG(A10) DT(B7):DA(A9) DG(B8):DC(A8) DT(B9):DA(A7) DT(B10):DA(A6) DA(B11):DT(A5) DT(B12):DA(A4) DA(B13):DT(A3) DC(B14):DG(A2) DC(B15):DG(A1) chainC ( 49) ARG69 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 53) ARG73 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainD ( 40) ARG69 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence nlrsrplarkklsemveeeleqmirrrefgegeqlpserelmaffnvgRpsvRealaalkrkglvqinngerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv/kklsemveeeleqmirrrefgegeqlpserelmaffnvgRpsvrealaalkrkglvqinngerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv >6wfq_D:GntR_ligand-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=NANR DIMER-DNA HETERO-COMPLEX organism=? DNA sequence DT(B1):DA(A15) DA(B2):DT(A14) DT(B3):DA(A13) DA(B4):DT(A12) DC(B5):DG(A11) DC(B6):DG(A10) DT(B7):DA(A9) DG(B8):DC(A8) DT(B9):DA(A7) DT(B10):DA(A6) DA(B11):DT(A5) DT(B12):DA(A4) DA(B13):DT(A3) DC(B14):DG(A2) DC(B15):DG(A1) chainD ( 40) ARG69 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence kklsemveeeleqmirrrefgegeqlpserelmaffnvgRpsvrealaalkrkglvqinngerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv >6wg3_A:P-loop_containing_nucleoside_triphosphate_hydrolases;Smc_hinge_domain; title=CRYO-EM STRUCTURE OF HUMAN COHESIN-NIPBL-DNA COMPLEX organism=? DNA sequence DA(F1):DT(G51) DA(F2):DT(G50) DA(F3):DT(G49) DA(F4):DT(G48) DA(F5):DT(G47) DA(F6):DT(G46) DA(F7):DT(G45) DA(F8):DT(G44) DA(F9):DT(G43) DA(F10):DT(G42) DA(F11):DT(G41) DA(F12):DT(G40) DA(F13):DT(G39) DA(F14):DT(G38) DA(F15):DT(G37) DA(F16):DT(G36) DA(F17):DT(G35) DA(F18):DT(G34) DA(F19):DT(G33) DA(F20):DT(G32) DA(F21):DT(G31) DA(F22):DT(G30) DA(F23):DT(G29) DA(F24):DT(G28) DA(F25):DT(G27) DA(F26):DT(G26) DA(F27):DT(G25) DA(F28):DT(G24) DA(F29):DT(G23) DA(F30):DT(G22) DA(F31):DT(G21) DA(F32):DT(G20) DA(F33):DT(G19) DA(F34):DT(G18) DA(F35):DT(G17) DA(F36):DT(G16) DA(F37):DT(G15) DA(F38):DT(G14) DA(F39):DT(G13) DA(F40):DT(G12) DA(F41):DT(G11) DA(F42):DT(G10) DA(F43):DT(G9) DA(F44):DT(G8) DA(F45):DT(G7) DA(F46):DT(G6) DA(F47):DT(G5) DA(F48):DT(G4) DA(F49):DT(G3) DA(F50):DT(G2) DA(F51):DT(G1) chainA (101) SER102 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gflklieienfksykgrqiigpfqrftaiigpngsgksnlmdaisfvlgektsnlrvktlrdlihgapvgkpaanrafvsmvyseegaedrtfarvivggSseykinnkvvqlheyseeleklgilikarnflvfqgavesiamknpkertalfeeisrsgelaqeydkrkkemvkaeedtqfnyhrkkniaaerkeakqerqessrqqrkaeimesikrlypgsvygrlidlcqptqkkyqiavtkvlgknmdaiivdsektgrdciqyikeqrgepetflpldylevkptdeklrelkgaklvidviryepphikkalqyacgnalvcdnvedarriafgghqrhktvaldgtlfqksgvisgglesvrdkfqetsdefeaarkrakkakqafeqikkerfdrfnacfesvatnideiykalsrnssaqaflgpenpeepyldginyncvapgkrfrpmdnlsggektvaalallfaihsykpapffvldqidaaldntnigkvanyikeqstcnfqaivislkeefytkaesligvypeqgdcviskvltfdltkypd >6wg3_ABDE:P-loop_containing_nucleoside_triphosphate_hydrolases;Smc_hinge_domain;ARM_repeat; title=CRYO-EM STRUCTURE OF HUMAN COHESIN-NIPBL-DNA COMPLEX organism=HOMO SAPIENS DNA sequence DA(F1):DT(G51) DA(F2):DT(G50) DA(F3):DT(G49) DA(F4):DT(G48) DA(F5):DT(G47) DA(F6):DT(G46) DA(F7):DT(G45) DA(F8):DT(G44) DA(F9):DT(G43) DA(F10):DT(G42) DA(F11):DT(G41) DA(F12):DT(G40) DA(F13):DT(G39) DA(F14):DT(G38) DA(F15):DT(G37) DA(F16):DT(G36) DA(F17):DT(G35) DA(F18):DT(G34) DA(F19):DT(G33) DA(F20):DT(G32) DA(F21):DT(G31) DA(F22):DT(G30) DA(F23):DT(G29) DA(F24):DT(G28) DA(F25):DT(G27) DA(F26):DT(G26) DA(F27):DT(G25) DA(F28):DT(G24) DA(F29):DT(G23) DA(F30):DT(G22) DA(F31):DT(G21) DA(F32):DT(G20) DA(F33):DT(G19) DA(F34):DT(G18) DA(F35):DT(G17) DA(F36):DT(G16) DA(F37):DT(G15) DA(F38):DT(G14) DA(F39):DT(G13) DA(F40):DT(G12) DA(F41):DT(G11) DA(F42):DT(G10) DA(F43):DT(G9) DA(F44):DT(G8) DA(F45):DT(G7) DA(F46):DT(G6) DA(F47):DT(G5) DA(F48):DT(G4) DA(F49):DT(G3) DA(F50):DT(G2) DA(F51):DT(G1) chainA (101) SER102 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainD chainE prot.sequence gflklieienfksykgrqiigpfqrftaiigpngsgksnlmdaisfvlgektsnlrvktlrdlihgapvgkpaanrafvsmvyseegaedrtfarvivggSseykinnkvvqlheyseeleklgilikarnflvfqgavesiamknpkertalfeeisrsgelaqeydkrkkemvkaeedtqfnyhrkkniaaerkeakqerqessrqqrkaeimesikrlypgsvygrlidlcqptqkkyqiavtkvlgknmdaiivdsektgrdciqyikeqrgepetflpldylevkptdeklrelkgaklvidviryepphikkalqyacgnalvcdnvedarriafgghqrhktvaldgtlfqksgvisgglesvrdkfqetsdefeaarkrakkakqafeqikkerfdrfnacfesvatnideiykalsrnssaqaflgpenpeepyldginyncvapgkrfrpmdnlsggektvaalallfaihsykpapffvldqidaaldntnigkvanyikeqstcnfqaivislkeefytkaesligvypeqgdcviskvltfdltkypd/myikqviiqgfrsyrdqtivdpfsskhnvivgrngsgksnffyaiqfvlsdefshlrpeqrlallhegtgprvisafveiifdnsdnrlpidkeevslrrVigakkdqyfldkkmvtkndvmnllesagfsrsnpyyivkqgkinqmatapdsqrlkllrevagtrvyderkeesislmketegkrekinellkyieerlhtleeekeelaqyqkwdkmrraleytiynqelnetrakldelkqqllraatgkailngidsinkvldhfrrkginqhvqngyhgivmnnfecepafytcvevtagnrlfyhivdsdevstkilmefnkmnlpgevtflplnkldvrdtaypetndaipmisklrynprfdkafkhvfgktlicrsmevstqlaraftmdcitlegdqvshrgaltggyydtrksrlelqkdvrnrqgmllkkkeecmkkirelgslpqeafekyqtlslkqlfrkleqcntelkkyshvnkkaldqfvnfseqkeklikrqeeldrgyksimelmnvlelrkyeaiqltfkqvsknfsevfqklvpggkatlvmkkgqftgvgirvsftgkqgemremqqlsggqkslvalalifaiqkcdpapfylfdqidqaldaqhrkavsdmimelavhaqfitttfrpellesadkfygvkfrnkvshidvitaemakdfveddtthg/tlfevvklgksamqsvvddwiesykqdrdialldlinffiqcsgcrgtvriemfrnmqnaeiirkmteefdedsgdypltmpgpqwkkfrsnfcefigvlIrqcqysiiydeymmdtvislltglsdsqvrafrhtstlaamklmtalvnvalnlsihqdntqrqyeaernkmigkranerlelllqkrkelqenqdeienmmnsifkgifvhryrdaiaeiraicieeigvwmkmysdaflndsylkyvgwtlhdrqgevrlkclkalqslytnrelfpklelftnrfkdrivsmtldkeydvaveairlvtlilhgseealsnedcenvyhlvysahrpvavaageflhkklfsnspngnlirmlvlffleselhehaaylvdslwessqellkdwecmtelllemsdrqesalielmvctirqaaeahppvgrgtgkrvltakerktqiddrnkltehfiitlpmllskysadaekvanllqipqyfdleiystgrmekhldallkqikfvvekhvesdvleacsktysilcseeytiqnrvdiarsqlidefvdrfnhsvedllqegeeaddddiynvlstlkrltsfhnahdltkwdlfgncyrllktgiehgampeqivvqalqcshysilwqlvkitdgspskedllvlrktvksflavcqqclsnvntpvkeqafmllcdllmifshqlmtggreglqplvfnpdtglqsellsfvmdhvfidqddeankiealhkrrnllaafskliiydivdmhaaadifkhymkyyndygdiiketlsktrqidkiqcaktlilslqqlfnelvqeqgpnldrtsahvsgikelarrfaltfgldqiktreavatlhkdgiefafkyqnqkgqeypppnlaflevlsefsskllrqdkktvhsylekflteqmmerredvwlplisyrnsl/mmdsstfkrftasienildnledmlllgkhqlnelgsesakikamgimdklstdktvkvlnilekniqdgsklserlwrdlimervtksadaclttinimTspnmpkavyiedvierviqytkfhlqntlypqydpvyrqrvivmlynkvcdivsslselleiqlltdttilqvssmgitpffvenvselqlcaiklvtavfsryekhrqlileeiftslarlptskrslrnfrlpmyiqmvtalvlqliqcvvhlpdvvitnsyetamrtaqnflsiflkkcgskqgeedyrplfenfvqdllstvnkpewpaaelllsllgrllvhqfsnkstemalrvasldylgtvaarlrkdavtskmdeiqqlqkalldyldentetdpslvfsrkfyiaqwfrdttletekkeiettgqimhraenrkkflrsdtvdyddaclivrylasmrpfaqsfdiyltqilrvlgenaiavrtkamkclsevvavdpsilarldmqrgvhgrlmdnstsvreaavellgrfvlcrpqlaeqyydmlierildtgisvrkrvikilrdicieqptfpkitemcvkmirrvndeegikklvnetfqklwftptphndkeamtrkilnitdvvaacrdtgydwfeqllqnllkseedssykpvkkactqlvdnlvehilkyeensgrlvacittlflfskirpqlmvkhamtmqpylttkcstqndfmvicnvakilelvvplmehpsetflatieedlmkliikygmtvvqhcvsclgavvnkvtqnfkfvwacfnryygaisklksqhqedpnntslltnkpallrslftvgalcrhfdfdledfkgnskvnikdkvlellmyftkhsdeevqtkaiiglgfafiqhpslmfeqevknlynnilsdknssvnlkiqvlknlqtylqeedtrmqqadrdwkkvakqedlkemgdvssgmsssimqlylkqvleaffhtqssvrhfalnvialtlnqglihpvqcvpyliamgtdpepamrnkadqqlveidkkyagfihmkavagmkmsyqvqqainsalcshlysmirgnrqhrraflisllnlfddtaktdvtmllyiadnlacfpyqtqeeplfimhhiditlsvsgsnllqsfkesliefanvsqgillllmlkqhlknlcgfsdskiqkyspsesakvydkainrktgvhfhpkqtldflrsdmanskiteevkrsivkqyldfkllmehl >6wg7_CDEFGH:GntR_ligand-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=COORDINATES OF NANR DIMER FITTED IN HEXAMERIC NANR-DNA HETERO-COMPLEX CRYO-EM MAP organism=ESCHERICHIA COLI DNA sequence DT(A1):DA(B35) DT(A2):DA(B34) DG(A3):DC(B33) DA(A4):DT(B32) DT(A5):DA(B31) DC(A6):DG(B30) DT(A7):DA(B29) DG(A8):DC(B28) DG(A9):DC(B27) DT(A10):DA(B26) DA(A11):DT(B25) DT(A12):DA(B24) DA(A13):DT(B23) DA(A14):DT(B22) DC(A15):DG(B21) DA(A16):DT(B20) DG(A17):DC(B19) DG(A18):DC(B18) DT(A19):DA(B17) DA(A20):DT(B16) DT(A21):DA(B15) DA(A22):DT(B14) DA(A23):DT(B13) DA(A24):DT(B12) DG(A25):DC(B11) DG(A26):DC(B10) DT(A27):DA(B9) DA(A28):DT(B8) DT(A29):DA(B7) DA(A30):DT(B6) DT(A31):DA(B5) DC(A32):DG(B4) DG(A33):DC(B3) DT(A34):DA(B2) DT(A35):DA(B1) chainC ( 37) SER57 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU58 0 0 0 0 0 0 0 0 0 0 0 0 1 19 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG69 0 0 0 0 0 0 0 0 0 0 7 40 21 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO70 0 0 0 0 0 0 0 0 0 26 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG73 0 0 0 0 0 0 0 0 0 0 0 30 41 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) GLU74 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 29) GLU58 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG59 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG69 0 0 0 0 0 0 6 4 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PRO70 0 0 0 0 0 0 0 0 0 13 27 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER71 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG73 0 0 0 0 0 0 0 4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 38) GLU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 17 1 0 0 0 0 0 0 0 0 0 0 ( 50) PRO70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 14 0 0 0 0 0 0 0 0 0 ( 53) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 35 1 0 0 0 0 0 0 0 0 0 0 ( 69) ASN89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) SER57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 29) GLU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 7 0 0 0 0 0 ( 30) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 52 11 0 0 0 0 ( 33) MET62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 ( 40) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 45 57 28 0 0 0 0 0 0 ( 41) PRO70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 30 5 0 0 0 0 0 0 0 0 ( 42) SER71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 43) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 44) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 chainF ( 37) SER57 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU58 0 0 0 0 0 0 0 0 0 0 0 0 0 17 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 15 25 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 14 43 38 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PRO70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 36 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 29) GLU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 23 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PRO70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nlrsrplarkklsemveeeleqmirrrefgegeqlpSERelmaffnvgRPsvREalaalkrkglvqinNgerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv/kklsemveeeleqmirrrefgegeqlpsERelmaffnvgRPSvRealaalkrkglvqinngerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv/nlrsrplarkklsemveeeleqmirrrefgegeqlpsERelmaffnvgRPsvRealaalkrkglvqinNgerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv/nlrsrplarkklsemveeeleqmirrrefgegeqlpSERelmaffnvgRPsvRealaalkrkglvqinngerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv/kklsemveeeleqmirrrefgegeqlpSERelMaffnvgRPSVRealaalkrkglvqinngerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv/kklsemveeeleqmirrrefgegeqlpsERelmaffnvgRPsvRealaalkrkglvqinngerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv >6wg7_G:GntR_ligand-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=COORDINATES OF NANR DIMER FITTED IN HEXAMERIC NANR-DNA HETERO-COMPLEX CRYO-EM MAP organism=? DNA sequence DT(A1):DA(B35) DT(A2):DA(B34) DG(A3):DC(B33) DA(A4):DT(B32) DT(A5):DA(B31) DC(A6):DG(B30) DT(A7):DA(B29) DG(A8):DC(B28) DG(A9):DC(B27) DT(A10):DA(B26) DA(A11):DT(B25) DT(A12):DA(B24) DA(A13):DT(B23) DA(A14):DT(B22) DC(A15):DG(B21) DA(A16):DT(B20) DG(A17):DC(B19) DG(A18):DC(B18) DT(A19):DA(B17) DA(A20):DT(B16) DT(A21):DA(B15) DA(A22):DT(B14) DA(A23):DT(B13) DA(A24):DT(B12) DG(A25):DC(B11) DG(A26):DC(B10) DT(A27):DA(B9) DA(A28):DT(B8) DT(A29):DA(B7) DA(A30):DT(B6) DT(A31):DA(B5) DC(A32):DG(B4) DG(A33):DC(B3) DT(A34):DA(B2) DT(A35):DA(B1) chainG ( 28) SER57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 29) GLU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 7 0 0 0 0 0 ( 30) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 52 11 0 0 0 0 ( 33) MET62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 ( 40) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 45 57 28 0 0 0 0 0 0 ( 41) PRO70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 30 5 0 0 0 0 0 0 0 0 ( 42) SER71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 43) VAL72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 44) ARG73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 prot.sequence kklsemveeeleqmirrrefgegeqlpSERelMaffnvgRPSVRealaalkrkglvqinngerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv >6wgc_9ABCDE: title=ATOMIC MODEL OF SEMI-ATTACHED MUTANT OCCM-DNA COMPLEX (ORC-CDC6-CDT1- MCM2-7 WITH MCM6 WHD TRUNCATION) organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(G1):DA(H41) DG(G2):DC(H40) DG(G3):DC(H39) DT(G4):DA(H38) DT(G5):DA(H37) DT(G6):DA(H36) DT(G7):DA(H35) DT(G8):DA(H34) DA(G9):DT(H33) DT(G10):DA(H32) DA(G11):DT(H31) DT(G12):DA(H30) DG(G13):DC(H29) DT(G14):DA(H28) DT(G15):DA(H27) DT(G16):DA(H26) DT(G17):DA(H25) DG(G18):DC(H24) DT(G19):DA(H23) DT(G20):DA(H22) DA(G21):DT(H21) DT(G22):DA(H20) DG(G23):DC(H19) DT(G24):DA(H18) DA(G25):DT(H17) DT(G26):DA(H16) DT(G27):DA(H15) DG(G28):DC(H14) DT(G29):DA(H13) DT(G30):DA(H12) DT(G31):DA(H11) DA(G32):DT(H10) DT(G33):DA(H9) DT(G34):DA(H8) DT(G35):DA(H7) DT(G36):DA(H6) DC(G37):DG(H5) DC(G38):DG(H4) DC(G39):DG(H3) DT(G40):DA(H2) DT(G41):DA(H1) chain9 chainA chainB chainC chainE (324) ARG344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 chainD (392) PHE485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) TYR486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 26 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ASN489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kallqksselartaeyeqvmnflakaisehrsdslyitgppgtgktaqldmiirqkfqslesvavtsincislgepssifqkifdsfqdlngptlqiknmqhlqkflepyhkkttfvvvldemdrllhantsetqsvrtilelfllaklptvsfvligmansldmkdrflsrlnldrgllpqtivfqpytaeqmyeiviqkmsslptiifqpmaikfaakkcagntgdlrklfdvlrgsieiyeleklnyiakvfskfvnnnstrtriaklniqqklilctiiqslklnsdatidesfdhyikaitktdtlaplqrnefleictiletcglvsikktkckgktkrfvdkidvdldmrefydemtkisilkpfl/srfenklkttqkhqivetifskvkkqlnssyylparenefasiylsaysaiesdsattiyvagtpgvgktltvrevvkellssdflyveinglkmvkptdcyetlwnkvsgerltwaasmeslefyfkrvpktivvlldeldamvtksqdimynffnwttyenakliviavantmdlperqlgnkitsrigftrimftgytheelkniidlrlkglndsffyvdtktgnailvrkvrlrmsadaieiasrkvasvsgdarralkvckraaeiaekhymakhgygydgvqtvhithvmkalnetlnshvitfmtrlsftaklfiyallnlmkkngsqeqelgdivdeikllievngsnkfvmeiaktlfqqgsdniseqlriiswdfvlnqlldagilfkqtmkndriccvklnisveeakramne/ksrhtmsmapdvtreefslvsnffnenfqkrprqklfeiqkkmfpqywfeltqgfsllfygvgskrnfleefaidylspkiaysqlvnsipclilngynpscnyrdvfkeitdllvpaeltrsetkgnhvilqiqkmidfyknqpldiklilvvhnldgpsirkntfqtmlsflsvirqiaivastdhiyapllwdnmkaqnynfvfhdisnfepstvestfqdvmkmgaegakyvlqsltvnskkmykllietqmqnrgtqrtgvelklfnhlcaadfiasneialrsmlrefiehkmanitkmeiiwvpytyaelekllktvln/adaqrshytvypekrwelyhqlhshfhdqvdhiidnieadlkaeisdllysettqkrrcfntifllgsdsttkielkdessrynvlieltpkespnvrmmlrrsmyklysaadaeehdvsydlslvenfkrlfgkdlamvfnfkdvdsinfntldnfiillksafkydhvkislifnintnlsnieknlrqstirllkrnyhkldvssnkgfkygnqifqsfldtvdgklnlsdrfvefilskmanntnhnlqlltkmldyslmsyffqnafsvfidpvnvdflnddylkilsrcptfmffveglikqhapadeilslltnknrgleeffveflvrenpinghakfvarfleeelnitnfnlielyhnlligkldsyldrwsackeykdrlhfepidtifqelftldnrsglltqsifpsyksniednllsweqvlplsgdldkimapvlgqlfklyreanmtiniydfyiafretlpkeeilnfirkdpsntkllelaetpdafdkvalilfmqaifafenmglikfqstksydlvekcvwrg/dpgfgslqrrllqqlygtlptdekiiftylqdcqqeidriikqsiiqkeshsvilvgprqsyktylldyelsllqqsykeqfitirlngfihseqtaingiatqleqqlqkihtissgsltevfekilllldsitkitvvfifdeidtfagpvrqtllynlfdmvehsrvpvcifgcttklnileylekrvksrfsqrviympqiqnlddmvdavrnlltvrseispwvsqwnetlekelsdprsnlnrhirmnfetfrslptlknsiiplvatsknfgslctaikscsfldiynknqlsnnltgrlqslsdlelailisaarvalrakdgsfnfnlayaeyekmikainsritiklwlkkdvknvwenlvqldffteksavglrdnataaFYasNyqfqgtmipfdlrsyqmqiilqelrriipksnmyyswtql/nvttpevafreyqtnclasyisadpditpsnlilqgysgtgktytlkkyfnanpnlhavwlepvelvswkpllqaiartvqyklktlypnipttdydplqveepfllvktlhnifvqyeslqektclflildgfdslqdldaalfnkyiklnellpkdskinikfiytmletsflqrysthciptvmfprynvdevstilvmsrcgelmedsclrkriieeqitdctddqfqnvaanfihlivqafhsytgndifalndlidfkwpkyvsritkenifeplalyksaiklflstddnlsqtydlsiiskylliasyicsylepRydasifsrknprylqpslfaierllaifqaifpslmkanievfqnlselhtlkliattmnknidylspkvrwkvnvpweiikeisesvhfnisdyfsd >6wgc_D:P-loop_containing_nucleoside_triphosphate_hydrolases; title=ATOMIC MODEL OF SEMI-ATTACHED MUTANT OCCM-DNA COMPLEX (ORC-CDC6-CDT1- MCM2-7 WITH MCM6 WHD TRUNCATION) organism=? DNA sequence DT(G1):DA(H41) DG(G2):DC(H40) DG(G3):DC(H39) DT(G4):DA(H38) DT(G5):DA(H37) DT(G6):DA(H36) DT(G7):DA(H35) DT(G8):DA(H34) DA(G9):DT(H33) DT(G10):DA(H32) DA(G11):DT(H31) DT(G12):DA(H30) DG(G13):DC(H29) DT(G14):DA(H28) DT(G15):DA(H27) DT(G16):DA(H26) DT(G17):DA(H25) DG(G18):DC(H24) DT(G19):DA(H23) DT(G20):DA(H22) DA(G21):DT(H21) DT(G22):DA(H20) DG(G23):DC(H19) DT(G24):DA(H18) DA(G25):DT(H17) DT(G26):DA(H16) DT(G27):DA(H15) DG(G28):DC(H14) DT(G29):DA(H13) DT(G30):DA(H12) DT(G31):DA(H11) DA(G32):DT(H10) DT(G33):DA(H9) DT(G34):DA(H8) DT(G35):DA(H7) DT(G36):DA(H6) DC(G37):DG(H5) DC(G38):DG(H4) DC(G39):DG(H3) DT(G40):DA(H2) DT(G41):DA(H1) chainD (392) PHE485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) TYR486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 26 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ASN489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dpgfgslqrrllqqlygtlptdekiiftylqdcqqeidriikqsiiqkeshsvilvgprqsyktylldyelsllqqsykeqfitirlngfihseqtaingiatqleqqlqkihtissgsltevfekilllldsitkitvvfifdeidtfagpvrqtllynlfdmvehsrvpvcifgcttklnileylekrvksrfsqrviympqiqnlddmvdavrnlltvrseispwvsqwnetlekelsdprsnlnrhirmnfetfrslptlknsiiplvatsknfgslctaikscsfldiynknqlsnnltgrlqslsdlelailisaarvalrakdgsfnfnlayaeyekmikainsritiklwlkkdvknvwenlvqldffteksavglrdnataaFYasNyqfqgtmipfdlrsyqmqiilqelrriipksnmyyswtql >6wge_ABE:P-loop_containing_nucleoside_triphosphate_hydrolases;Smc_hinge_domain;ARM_repeat; title=CRYO-EM STRUCTURE OF HUMAN COHESIN-NIPBL-DNA COMPLEX WITHOUT STAG1 organism=HOMO SAPIENS DNA sequence DT(G1):DA(F43) DT(G2):DA(F42) DT(G3):DA(F41) DT(G4):DA(F40) DT(G5):DA(F39) DT(G6):DA(F38) DT(G7):DA(F37) DT(G8):DA(F36) DT(G9):DA(F35) DT(G10):DA(F34) DT(G11):DA(F33) DT(G12):DA(F32) DT(G13):DA(F31) DT(G14):DA(F30) DT(G15):DA(F29) DT(G16):DA(F28) DT(G17):DA(F27) DT(G18):DA(F26) DT(G19):DA(F25) DT(G20):DA(F24) DT(G21):DA(F23) DT(G22):DA(F22) DT(G23):DA(F21) DT(G24):DA(F20) DT(G25):DA(F19) DT(G26):DA(F18) DT(G27):DA(F17) DT(G28):DA(F16) DT(G29):DA(F15) DT(G30):DA(F14) DT(G31):DA(F13) DT(G32):DA(F12) DT(G33):DA(F11) DT(G34):DA(F10) DT(G35):DA(F9) DT(G36):DA(F8) DT(G37):DA(F7) DT(G38):DA(F6) DT(G39):DA(F5) DT(G40):DA(F4) DT(G41):DA(F3) DT(G42):DA(F2) DT(G43):DA(F1) chainA (101) SER102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainB chainE prot.sequence gflklieienfksykgrqiigpfqrftaiigpngsgksnlmdaisfvlgektsnlrvktlrdlihgapvgkpaanrafvsmvyseegaedrtfarvivggSseykinnkvvqlheyseeleklgilikarnflvfqgavesiamknpkertalfeeisrsgelaqeydkrkkemvkaeedtqfnyhrkkniaaerkeavrdkfqetsdefeaarkrakkakqafeqikkerfdrfnacfesvatnideiykalsrnssaqaflgpenpeepyldginyncvapgkrfrpmdnlsggektvaalallfaihsykpapffvldqidaaldntnigkvanyikeqstcnfqaivislkeefytkaesligvypeqgdcviskvltfdltkypd/myikqviiqgfrsyrdqtivdpfsskhnvivgrngsgksnffyaiqfvlsdefshlrpeqrlallhegtgprvisafveiifdnsdnrlpidkeevslrrVigakkdqyfldkkmvtkndvmnllesagfsrsnpyyivkqgkinqmatapdsqrlkllrevagtrvyderkeesislmketegkrekinellkyieerlhtleeekeelaqyqkwdkmrraleytiynqelnetrakkkeecmkkirelgslpqeafekyqtlslkqlfrkleqcntelkkyshvnkkaldqfvnfseqkeklikrqeeldrgyksimelmnvlelrkyeaiqltfkqvsknfsevfqklvpggkatlvmkkgqftgvgirvsftgkqgemremqqlsggqkslvalalifaiqkcdpapfylfdqidqaldaqhrkavsdmimelavhaqfitttfrpellesadkfygvkfrnkvshidvitaemakdfveddtthg/mmdsstfkrftasienildnledmlllgkhqlnelgsesakikamgimdklstdktvkvlnilekniqdgsklserlwrdlimervtksadaclttinimTspnmpkavyiedvierviqytkfhlqntlypqydpvyrqrvivmlynkvcdivsslselleiqlltdttilqvssmgitpffvenvselqlcaiklvtavfsryekhrqlileeiftslarlptskrslrnfrlpmyiqmvtalvlqliqcvvhlpdvvitnsyetamrtaqnflsiflkkcgskqgeedyrplfenfvqdllstvnkpewpaaelllsllgrllvhqfsnkstemalrvasldylgtvaarlrkdavtskmdeiqqlqkalldyldentetdpslvfsrkfyiaqwfrdttletekkeiettgqimhraenrkkflrsdtvdyddaclivrylasmrpfaqsfdiyltqilrvlgenaiavrtkamkclsevvavdpsilarldmqrgvhgrlmdnstsvreaavellgrfvlcrpqlaeqyydmlierildtgisvrkrvikilrdicieqptfpkitemcvkmirrvndeegikklvnetfqklwftptphndkeamtrkilnitdvvaacrdtgydwfeqllqnllkseedssykpvkkactqlvdnlvehilkyeensgrlvacittlflfskirpqlmvkhamtmqpylttkcstqndfmvicnvakilelvvplmehpsetflatieedlmkliikygmtvvqhcvsclgavvnkvtqnfkfvwacfnryygaisklksqhqedpnntslltnkpallrslftvgalcrhfdfdledfkgnskvnikdkvlellmyftkhsdeevqtkaiiglgfafiqhpslmfeqevknlynnilsdknssvnlkiqvlknlqtylqeedtrmqqadrdwkkvakqedlkemgdvssgmsssimqlylkqvleaffhtqssvrhfalnvialtlnqglihpvqcvpyliamgtdpepamrnkadqqlveidkkyagfihmkavagmkmsyqvqqainsalcshlysmirgnrqhrraflisllnlfddtaktdvtmllyiadnlacfpyqtqeeplfimhhiditlsvsgsnllqsfkesliefanvsqgillllmlkqhlknlcgfsdskiqkyspsesakvydkainrktgvhfhpkqtldflrsdmanskiteevkrsivkqyldfkllmehl >6wgg_49ABCDE:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=ATOMIC MODEL OF PRE-INSERTION MUTANT OCCM-DNA COMPLEX(ORC-CDC6-CDT1- MCM2-7 WITH MCM6 WHD TRUNCATION) organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(H1):DT(G41) DA(H2):DT(G40) DG(H3):DC(G39) DG(H4):DC(G38) DG(H5):DC(G37) DA(H6):DT(G36) DA(H7):DT(G35) DA(H8):DT(G34) DA(H9):DT(G33) DT(H10):DA(G32) DA(H11):DT(G31) DA(H12):DT(G30) DA(H13):DT(G29) DC(H14):DG(G28) DA(H15):DT(G27) DA(H16):DT(G26) DT(H17):DA(G25) DA(H18):DT(G24) DC(H19):DG(G23) DA(H20):DT(G22) DT(H21):DA(G21) DA(H22):DT(G20) DA(H23):DT(G19) DC(H24):DG(G18) DA(H25):DT(G17) DA(H26):DT(G16) DA(H27):DT(G15) DA(H28):DT(G14) DC(H29):DG(G13) DA(H30):DT(G12) DT(H31):DA(G11) DA(H32):DT(G10) DT(H33):DA(G9) DA(H34):DT(G8) DA(H35):DT(G7) DA(H36):DT(G6) DA(H37):DT(G5) DA(H38):DT(G4) DC(H39):DG(G3) DC(H40):DG(G2) DA(H41):DT(G1) chain9 chainA chainB chainC chainE (324) ARG344 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (392) PHE485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) TYR486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 26 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ASN489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain4 prot.sequence lriiwgtnvsiqecttnfrnflmsfkykfrkilderdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsktyvdvvhvkkvshneveevrqitdqdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktftkggryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitrdvdtkqlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledkpehisqddvlpvefltmyisyakehihpiiteaaktelvrayvgmrktrqlesmirlaeahakmklknvveledvqeavrlirsaikrklqedlsreimnvlkdqasdsmsfnelikqinehsqdrvessdiqealsrlqqedkvivlgegvrrs/kallqksselartaeyeqvmnflakaisehrsdslyitgppgtgktaqldmiirqkfqslesvavtsincislgepssifqkifdsfqdlngptlqiknmqhlqkflepyhkkttfvvvldemdrllhantsetqsvrtilelfllaklptvsfvligmansldmkdrflsrlnldrgllpqtivfqpytaeqmyeiviqkmsslptiifqpmaikfaakkcagntgdlrklfdvlrgsieiyeleklnyiakvfskfvnnnstrtriaklniqqklilctiiqslklnsdatidesfdhyikaitktdtlaplqrnefleictiletcglvsikktkckgktkrfvdkidvdldmrefydemtkisilkpfl/srfenklkttqkhqivetifskvkkqlnssyylparenefasiylsaysaiesdsattiyvagtpgvgktltvrevvkellssdflyveinglkmvkptdcyetlwnkvsgerltwaasmeslefyfkrvpktivvlldeldamvtksqdimynffnwttyenakliviavantmdlperqlgnkitsrigftrimftgytheelkniidlrlkglndsffyvdtktgnailvrkvrlrmsadaieiasrkvasvsgdarralkvckraaeiaekhymakhgygydgvqtvhithvmkalnetlnshvitfmtrlsftaklfiyallnlmkkngsqeqelgdivdeikllievngsnfvmeiaktlfqqgsdniseqlriiswdfvlnqlldagilfkqtmkndriccvklnisveeakramne/ksrhtmsmapdvtreefslvsnffnenfqkrprqklfeiqkkmfpqywfeltqgfsllfygvgskrnfleefaidylspkiaysqlvnsipclilngynpscnyrdvfkeitdllvpaeltrsetkgnhvilqiqkmidfyknqpldiklilvvhnldgpsirkntfqtmlsflsvirqiaivastdhiyapllwdnmkaqnynfvfhdisnfepstvestfqdvmkmgaegakyvlqsltvnskkmykllietqmqnrgtqrtgvelklfnhlcaadfiasneialrsmlrefiehkmanitkmeiiwvpytyaelekllktvln/adaqrshytvypekrwelyhqlhshfhdqvdhiidnieadlkaeisdllysettqkrrcfntifllgsdsttkielkdessrynvlieltpkespnvrmmlrrsmyklysaadaeehdvsydlslvenfkrlfgkdlamvfnfkdvdsinfntldnfiillksafkydhvkislifnintnlsnieknlrqstirllkrnyhkldvssnkgfkygnqifqsfldtvdgklnlsdrfvefilskmanntnhnlqlltkmldyslmsyffqnafsvfidpvnvdflnddylkilsrcptfmffveglikqhapadeilslltnknrgleeffveflvrenpinghakfvarfleeelnitnfnlielyhnlligkldsyldrwsackeykdrlhfepidtifqelftldnrsglltqsifpsyksniednllsweqvlplsgdldkimapvlgqlfklyreanmtiniydfyiafretlpkeeilnfirkdpsntkllelaetpdafdkvalilfmqaifafenmglikfqstksydlvekcvwrg/dpgfgslqrrllqqlygtlptdekiiftylqdcqqeidriikqsiiqkeshsvilvgprqsyktylldyelsllqqsykeqfitirlngfihseqtaingiatqleqqlqkihtissgsltevfekilllldsitkitvvfifdeidtfagpvrqtllynlfdmvehsrvpvcifgcttklnileylekrvksrfsqrviympqiqnlddmvdavrnlltvrseispwvsqwnetlekelsdprsnlnrhirmnfetfrslptlknsiiplvatsknfgslctaikscsfldiynknqlsnnltgrlqslsdlelailisaarvalrakdgsfnfnlayaeyekmikainsritiklwlkkdvknvwenlvqldffteksavglrdnataaFYasNyqfqgtmipfdlrsyqmqiilqelrriipksnmyyswtql/nvttpevafreyqtnclasyisadpditpsnlilqgysgtgktytlkkyfnanpnlhavwlepvelvswkpllqaiartvqyklktlypnipttdydplqveepfllvktlhnifvqyeslqektclflildgfdslqdldaalfnkyiklnellpkdskinikfiytmletsflqrysthciptvmfprynvdevstilvmsrcgelmedsclrkriieeqitdctddqfqnvaanfihlivqafhsytgndifalndlidfkwpkyvsritkenifeplalyksaiklflstddnlsqtydlsiiskylliasyicsylepRydasifsrknprylqpslfaierllaifqaifpslmkanievfqnlselhtlkliattmnknidylspkvrwkvnvpweiikeisesvhfnisdyfsd >6wgi_79BCDE:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=ATOMIC MODEL OF THE MUTANT OCCM (ORC-CDC6-CDT1-MCM2-7 WITH MCM6 WHD TRUNCATION) LOADED ON DNA AT 10.5 A RESOLUTION organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(G1):DA(H41) DG(G2):DC(H40) DG(G3):DC(H39) DT(G4):DA(H38) DT(G5):DA(H37) DT(G6):DA(H36) DT(G7):DA(H35) DT(G8):DA(H34) DA(G9):DT(H33) DT(G10):DA(H32) DA(G11):DT(H31) DT(G12):DA(H30) DG(G13):DC(H29) DT(G14):DA(H28) DT(G15):DA(H27) DT(G16):DA(H26) DT(G17):DA(H25) DG(G18):DC(H24) DT(G19):DA(H23) DT(G20):DA(H22) DA(G21):DT(H21) DT(G22):DA(H20) DG(G23):DC(H19) DT(G24):DA(H18) DA(G25):DT(H17) DT(G26):DA(H16) DT(G27):DA(H15) DG(G28):DC(H14) DT(G29):DA(H13) DT(G30):DA(H12) DT(G31):DA(H11) DA(G32):DT(H10) DT(G33):DA(H9) DT(G34):DA(H8) chain9 chainB (122) ARG390 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainE chainD (393) TYR486 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain7 prot.sequence vdynnlfneitdflvtfkqdkgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcraidnnmplptkltrryflyfkplsqncarryisskplsvrqikgdflgqlitvrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflleaqfvrqhveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrvgdgmkirgdinvclmgdpsqllkaickisprgvytvmkdpvtdemileggalvladngiccidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskdskfsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyqespttkiftiikkmlqetgkntlsyenivktvrlrgftmlqlsnciqeysylnv/kallqksselartaeyeqvmnflakaisehrsdslyitgppgtgktaqldmiirqkfqslesvavtsincislgepssifqkifdsfqdlngptlqiknmqhlqkflepyhkkttfvvvldemdrllhantsetqsvrtilelfllaklptvsfvligmansldmkdrflsrlnldrgllpqtivfqpytaeqmyeiviqkmsslptiifqpmaikfaakkcagntgdlrklfdvlrgsieiyeleklnyiakvfskfvnnnstrtriaklniqqklilctiiqslklnsdatidesfdhyikaitktdtlaplqrnefleictiletcglvsikktkckgktkrfvdkidvdldmrefydemtkisilkpfl/ksrhtmsmapdvtreefslvsnffnenfqkrprqklfeiqkkmfpqywfeltqgfsllfygvgskrnfleefaidylspkiaysqlvnsipclilngynpscnyrdvfkeitdllvpaeltRsetknhvilqiqkmidfyknqpldiklilvvhnldgpsirkntfqtmlsflsvirqiaivastdhiyapllwdnmkaqnynfvfhdisnfepstvestfqdvmkmgaegakyvlqsltvnskkmykllietqmqnrgtqrtgvelklfnhlcaadfiasneialrsmlrefiehkmanitkmeiiwvpytyaelekllktvln/adaqrshytvypekrwelyhqlhshfhdqvdhiidnieadlkaeisdllysettqkrrcfntifllgsdsttkielkdessrynvlieltpkespnvrmmlrrsmyklysaadaeehdvsyDlslvenfkrlfgkdlamvfnfkdvdsinfntldnfiillksafkydhvkislifnintnlsnieknlrqstirllkrnyhkldvssnkgfkygnqifqsfldtvdgklnlsdrfvefilskmanntnhnlqlltkmldyslmsyffqnafsvfidpvnvdflnddylkilsrcptfmffveglikqhapadeilslltnknrgleeffveflvrenpinghakfvarfleeelnitnfnlielyhnlligkldsyldrwsackeykdrlhfepidtifqelftldnrsglltqsifpsyksniednllsweqvlplsgdldkimapvlgqlfklyreanmtiniydfyiafretlpkeeilnfirkdpsntkllelaetpdafdkvalilfmqaifafenmglikfqstksydlvekcvwrg/dpgfgslqrrllqqlygtlptdekiiftylqdcqqeidriikqsiiqkeshsvilvgprqsyktylldyelsllqqsykeqfitirlngfihseqtaingiatqleqqlqkihtissgsltevfekilllldsitkitvvfifdeidtfagpvrqtllynlfdmvehsrvpvcifgcttklnileylekrvksrfsqrviympqiqnlddmvdavrnlltvrseispwvsqwnetlekelsdprsnlnrhirmnfetfrslptlknsiiplvatsknfgslctaikscsfldiynknqlsnnltgrlqslsdlelailisaarvalrakdgsfnfnlayaeyekmikainsritiklwlkkdvknvwenlvqldffteksavglrdnataafYasnyqfqgtmipfdlrsyqmqiilqelrriipksnmyyswtql/nvttpevafreyqtnclasyisadpditpsnlilqgysgtgktytlkkyfnanpnlhavwlepvelvswkpllqaiartvqyklktlypnipttdydplqveepfllvktlhnifvqyeslqektclflildgfdslqdldaalfnkyiklnellpkdskinikfiytmletsflqrysthciptvmfprynvdevstilvmsrcgelmedsclrkriieeqitdctddqfqnvaanfihlivqafhsytgndifalndlidfkwpkyvsritkenifeplalyksaiklflstddnlsqtydlsiiskylliasyicsyleprydasifsrknprylqpslfaierllaifqaifpslmkanievfqnlselhtlkliattmnknidylspKvrwkvnvpweiikeisesvhfnisdyfsd >6whi_AJ: title=CRYO-ELECTRON MICROSCOPY STRUCTURE OF THE TYPE I-F CRISPR RNA-GUIDED SURVEILLANCE COMPLEX BOUND TO THE ANTI-CRISPR ACRIF9 organism=PROTEUS PENNERI / PSEUDOMONAS AERUGINOSA DNA sequence DG(O101):DC(N17) DT(O102):DA(N16) DC(O103):DG(N15) DT(O104):DA(N14) DT(O105):DA(N13) DA(O106):DT(N12) DA(O107):DT(N11) DC(O108):DG(N10) DT(O109):DA(N9) DC(O110):DG(N8) DG(O111):DC(N7) DA(O112):DT(N6) DG(O113):DC(N5) DC(O114):DG(N4) DT(O115):DA(N3) chainA chainJ ( 30) ARG32 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence qelrqfiesfiqerlqgkldklqpdeddkrqtllathrreawladaarrvgqlqlvthtlkpihpdargsnlhslpqapgqpglagshelgdrlvsdvvgnaaaldvfkflslqyqgknllnwltedsaealqalsdnaeqarewrqafigittvkgapashslakqlyfplpgsgyhllaplfptslvhhvhallrearfgdaakaarearsrqeswphgfseypnlaiqkfggtkpqnisqlnnerrgenwllpslppnwqrqnvnapsvfehdfgrtpevsrltrtlqrflaktvhnnlairqrraqlvaqicdealqyaarlrecqlhdaeqlwldplraqtdetflqrrlrgdwpaevgnrfanwlnravssdsqilgspeaaqwsqelskeltmfkeilederd/styiikevqninsdregvkvettsltsakRiasknqffhgtvlriesesgnwlaykedgkrwie >6whi_J: title=CRYO-ELECTRON MICROSCOPY STRUCTURE OF THE TYPE I-F CRISPR RNA-GUIDED SURVEILLANCE COMPLEX BOUND TO THE ANTI-CRISPR ACRIF9 organism=PROTEUS PENNERI DNA sequence DG(O101):DC(N17) DT(O102):DA(N16) DC(O103):DG(N15) DT(O104):DA(N14) DT(O105):DA(N13) DA(O106):DT(N12) DA(O107):DT(N11) DC(O108):DG(N10) DT(O109):DA(N9) DC(O110):DG(N8) DG(O111):DC(N7) DA(O112):DT(N6) DG(O113):DC(N5) DC(O114):DG(N4) DT(O115):DA(N3) chainJ ( 30) ARG32 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence styiikevqninsdregvkvettsltsakRiasknqffhgtvlriesesgnwlaykedgkrwie >6wie_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=POST-CATALYTIC NICKED COMPLEX OF HUMAN POLYMERASE MU ON A COMPLEMENTARY DNA DOUBLE-STRAND BREAK SUBSTRATE organism=HOMO SAPIENS DNA sequence DC(P1):DG(U3) DG(P2):DC(U2) DT(P3):DA(U1) DA(P4):DT(T6) DT(P5):DA(T5) chainA (234) ARG387 0 1 5 1 0 (236) PHE389 0 1 3 0 0 (273) LYS438 0 0 0 0 18 (276) GLN441 0 0 0 0 1 (277) ARG442 0 0 0 0 27 (280) ARG445 0 0 0 4 8 prot.sequence pawmpayacqrptplthhntglsealeilaeaagfegsegrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqQqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqhfeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >6wig_A:Homeodomain-like; title=STRUCTURE OF STENOFOLIA PROTEIN HD DOMAIN BOUND WITH DNA organism=MEDICAGO TRUNCATULA DNA sequence DC(D1):DG(C22) DT(D2):DA(C21) DT(D3):DA(C20) DG(D4):DC(C19) DA(D5):DT(C18) DA(D6):DT(C17) DT(D7):DA(C16) DA(D8):DT(C15) DA(D9):DT(C14) DA(D10):DT(C13) DT(D11):DA(C12) DC(D12):DG(C11) DA(D13):DT(C10) DT(D14):DA(C9) DT(D15):DA(C8) DA(D16):DT(C7) DA(D17):DT(C6) DT(D18):DA(C5) DT(D19):DA(C4) DT(D20):DA(C3) DG(D21):DC(C2) DC(D22):DG(C1) chainA ( 8) ARG96 0 12 6 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) TYR143 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLN146 0 0 0 0 0 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN147 0 0 0 6 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ALA150 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG151 0 0 21 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aavvvssRwnptpeqlraleelyrrgtrtpsaeqiqqitaqlrkfgkiegknvfYwfQNhkARerqkrrrqmesaaaefdsaie >6wig_AB:Homeodomain-like; title=STRUCTURE OF STENOFOLIA PROTEIN HD DOMAIN BOUND WITH DNA organism=MEDICAGO TRUNCATULA DNA sequence DC(D1):DG(C22) DT(D2):DA(C21) DT(D3):DA(C20) DG(D4):DC(C19) DA(D5):DT(C18) DA(D6):DT(C17) DT(D7):DA(C16) DA(D8):DT(C15) DA(D9):DT(C14) DA(D10):DT(C13) DT(D11):DA(C12) DC(D12):DG(C11) DA(D13):DT(C10) DT(D14):DA(C9) DT(D15):DA(C8) DA(D16):DT(C7) DA(D17):DT(C6) DT(D18):DA(C5) DT(D19):DA(C4) DT(D20):DA(C3) DG(D21):DC(C2) DC(D22):DG(C1) chainA ( 8) ARG96 0 12 6 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) TYR143 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLN146 0 0 0 0 0 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN147 0 0 0 6 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ALA150 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG151 0 0 21 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 5) ARG96 0 0 0 0 0 0 0 0 0 0 0 4 7 8 1 0 0 0 0 0 0 0 ( 52) TYR143 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 ( 55) GLN146 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ASN147 0 0 0 0 0 0 0 0 0 1 12 6 0 0 0 0 0 0 0 0 0 0 ( 60) ARG151 0 0 0 0 0 0 0 0 0 0 3 12 18 0 0 0 0 0 0 0 0 0 prot.sequence aavvvssRwnptpeqlraleelyrrgtrtpsaeqiqqitaqlrkfgkiegknvfYwfQNhkARerqkrrrqmesaaaefdsaie/vvssRwnptpeqlraleelyrrgtrtpsaeqiqqitaqlrkfgkiegknvfYwfQNhkaRerqkrrrq >6wk6_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN POLYMERASE ETA COMPLEXED WITH XANTHINE CONTAINING DNA organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DT(P3):DA(T10) DG(P4):DC(T9) DT(P5):DA(T8) DG(P6):DC(T7) DA(P7):DT(T6) DG(P8):DC(T5) chainA (373) LEU378 0 0 0 0 0 1 2 0 (377) ARG382 0 6 4 0 0 0 0 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >6wmi_A:beta-beta-alpha_zinc_fingers; title=ZNF410 ZINC FINGERS 1-5 WITH 17 MER BLUNT DNA OLIGONUCLEOTIDE organism=Homo sapiens DNA sequence DC(F1):DG(E17) DA(F2):DT(E16) DT(F3):DA(E15) DT(F4):DA(E14) DA(F5):DT(E13) DT(F6):DA(E12) DT(F7):DA(E11) DA(F8):DT(E10) DT(F9):DA(E9) DG(F10):DC(E8) DG(F11):DC(E7) DG(F12):DC(E6) DA(F13):DT(E5) DT(F14):DA(E4) DG(F15):DC(E3) DT(F16):DA(E2) DG(F17):DC(E1) chainA ( 16) TRP232 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ALA234 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) HIS235 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) TYR238 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 ( 48) GLN264 0 0 0 15 11 2 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG265 0 0 0 0 0 0 11 6 0 0 0 0 0 0 0 0 0 ( 52) VAL268 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 76) THR292 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 79) ASN295 0 0 0 0 0 0 0 0 9 12 0 0 0 0 0 0 0 (106) GLU322 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 (107) TYR323 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (108) SER324 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 (109) SER325 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 (112) LYS328 0 0 0 0 0 0 0 0 0 0 2 5 6 0 0 0 0 (134) GLN350 0 0 0 0 0 0 0 0 0 0 0 0 2 10 7 0 0 (137) SER353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 prot.sequence kklkctvegcdrtfvWpAHfkYhlkthrndrsficpaegcgksfyvlQRlkVhmrthngekpfmchesgcgkqftTagNlkNhrrihtgekpflceaqgcgrsfaEYSSlrKhlvvhsgekphqcqvcgktfsQsgSrnvhmrkhh >6wmp_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=F. TULARENSIS RNAPS70-IGLA DNA COMPLEX organism=? DNA sequence DG(G1):DC(F29) DG(G2):DC(F28) DG(G3):DC(F27) DT(G4):DA(F26) DA(G5):DT(F25) DT(G6):DA(F24) DT(G7):DA(F23) DC(G8):DG(F22) DG(G9):DC(F21) DC(G10):DG(F20) DC(G11):DG(F19) DG(G12):DC(F18) DT(G13):DA(F17) chainC (424) ARG545 0 0 0 0 0 0 0 0 0 0 0 0 23 prot.sequence msysyaekkrirkefgvlphildvpyllsiqtesykkfltvdaakgrlhsgleivlkqsfpveskngqyelhyvdyqigeptfdetecqvrgatydaplnvklrlvvynkdalpnekivedireeyvymgdiplmttngtfiingtervvvsqlhrspgaffskddseegafsariipyrgswldfefdskgiiwaridrkrkfcatvilkalgytqeqilenrgryisdtlkydltrntdealveiykvlrpgdppaaasvkalfeglffiesryslsdigrmklnarlgsdkvskdiytlensdivgvieelinirdgkgkvddidhlgnrrvrsvgemvenqfriglyrvekgiresmslvhkdklmpkdivnskpitaaikefftsgalsqfmdqdnplsevthkrrisalgpgglsrdRagfevrdvhathygrlcpietpegpniglinslasyarvndygfleapyrkvvdgkvtdeieylsaidednyviaqastkldennhfvediiqcrsggeaiftessrvqymdvsakqmvsaaaalipflehddanrvlmganmqrqavptlksekplvgtgmekivardsgnciiarnvgevaevdsnrivikvdteksqtsnlvdiysltkfkrsnkntcinqrpivnvgdkveagdiladgfatdfgelslghnlmvafmpwngynfedsillserivkddkytsihieeftcvardtklgpeeitadipnvsesslakldesgivhiganveagdilvakitpkaeqqltpeerllraifnekasnvvdsslrmpsgtsgtvinvqvfendkggkskralkiekelidkarkdfdeefaviesvvkssieqevvgekvqnareyyeeakiaidakfeakkksitqsnelspgvlktvkvfvaikkriqpgdkmagrhgnkgvvsrvlpvedmpymedgtpvdvclnplgipsrmnigqileahlglasyglgkkiektlektrkaaelrktleevynsvgdkkvnlealndeeiltlcdnlkggvpiatpvfdgakeediksllkiggfatngqmklfdgrtgkpfdrhvtvgymymlkldhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwalqaygaaytlremltvksddiagrskmyknivdgkltmnvdvpesfnvlrnevralgidmdfdysse >6wmp_CD:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=F. TULARENSIS RNAPS70-IGLA DNA COMPLEX organism=? DNA sequence DG(G1):DC(F29) DG(G2):DC(F28) DG(G3):DC(F27) DT(G4):DA(F26) DA(G5):DT(F25) DT(G6):DA(F24) DT(G7):DA(F23) DC(G8):DG(F22) DG(G9):DC(F21) DC(G10):DG(F20) DC(G11):DG(F19) DG(G12):DC(F18) DT(G13):DA(F17) chainC (424) ARG545 0 0 0 0 0 0 0 0 0 0 0 0 23 chainD (203) LYS214 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence msysyaekkrirkefgvlphildvpyllsiqtesykkfltvdaakgrlhsgleivlkqsfpveskngqyelhyvdyqigeptfdetecqvrgatydaplnvklrlvvynkdalpnekivedireeyvymgdiplmttngtfiingtervvvsqlhrspgaffskddseegafsariipyrgswldfefdskgiiwaridrkrkfcatvilkalgytqeqilenrgryisdtlkydltrntdealveiykvlrpgdppaaasvkalfeglffiesryslsdigrmklnarlgsdkvskdiytlensdivgvieelinirdgkgkvddidhlgnrrvrsvgemvenqfriglyrvekgiresmslvhkdklmpkdivnskpitaaikefftsgalsqfmdqdnplsevthkrrisalgpgglsrdRagfevrdvhathygrlcpietpegpniglinslasyarvndygfleapyrkvvdgkvtdeieylsaidednyviaqastkldennhfvediiqcrsggeaiftessrvqymdvsakqmvsaaaalipflehddanrvlmganmqrqavptlksekplvgtgmekivardsgnciiarnvgevaevdsnrivikvdteksqtsnlvdiysltkfkrsnkntcinqrpivnvgdkveagdiladgfatdfgelslghnlmvafmpwngynfedsillserivkddkytsihieeftcvardtklgpeeitadipnvsesslakldesgivhiganveagdilvakitpkaeqqltpeerllraifnekasnvvdsslrmpsgtsgtvinvqvfendkggkskralkiekelidkarkdfdeefaviesvvkssieqevvgekvqnareyyeeakiaidakfeakkksitqsnelspgvlktvkvfvaikkriqpgdkmagrhgnkgvvsrvlpvedmpymedgtpvdvclnplgipsrmnigqileahlglasyglgkkiektlektrkaaelrktleevynsvgdkkvnlealndeeiltlcdnlkggvpiatpvfdgakeediksllkiggfatngqmklfdgrtgkpfdrhvtvgymymlkldhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwalqaygaaytlremltvksddiagrskmyknivdgkltmnvdvpesfnvlrnevralgidmdfdysse/skkfdiikislaspevirswshgevkkpetinyrtfkperdglfcakifgpikdyeclcgkykrlkhrgvvcercgveveqakvrrermghidlvcpvvhiwylkslpsriglfldmplknvekvlyfesyivtdpgmtplekkqlltdeeyaealenygyefeasmgaeairdlladtdieseiellqaeceeskstakkeKaikrlrlletfqasgnkpewmvmtvlpvlppdlrplvpieggrfatsdlndlyrrvinrnnrlkklldlnapdiivrnekrmlqeavdalldngrrgravtgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpslrlhecglpkkmalelfkpfvysklrlgghattikqakrmveleeavvwdiletvinehpvllnraptlhrlgiqafeprliegkaiqlhplvcaafnadfdgdqmavhvpltvesqlearvlmmstnnilspasgqpiitptqdivlglyyitrekegargegklfssyedvsraynsgtidihakiklridrqvfdtkgntynekgvvnttvgralllnilpeglsfsllnkvlvkkeiskiinqafrvlggkatvvladklmyagfkystlsgvsvgvddmtipdnkeakieeaekeikqiteqyqsslitenerynniiniwsktsdevgasmmdaiskdtvsingekkeiesfnsvymmaksgargsynqmrqlagmrglmakpdgtmietaitanfreglsvlqyftsthgarkgladtalktanagyltrrlvdvaqdlvvieedcgtddglmfsaivedgevkvplveralgrtlaadvvtekgvvlleagtlldenlvellddngidmikvrspitcktrrglcakcygrdlarerqvnvgesvgviaaqsigepgtqltmglprvaelfearrpkdaailspcdgmvrlgnrdtkekqrieiidknghiveeillpksrhlvvfdgeqvsrgdvladgptdphdllkykgleefadyilieaqsvyrmqgvvindkhietivrqmlrkavildegdskfvkdesielvrileendklrkqgkkeveyelvlmgitrsslstesflsaasfqettrvlteasinsqidnlrglkenvligrlipagtglavrkesakiekmre >6wmp_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=F. TULARENSIS RNAPS70-IGLA DNA COMPLEX organism=? DNA sequence DA(F17):DT(G13) DC(F18):DG(G12) DG(F19):DC(G11) DG(F20):DC(G10) DC(F21):DG(G9) DG(F22):DC(G8) DA(F23):DT(G7) DA(F24):DT(G6) DT(F25):DA(G5) DA(F26):DT(G4) DC(F27):DG(G3) DC(F28):DG(G2) DC(F29):DG(G1) chainD (203) LYS214 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence skkfdiikislaspevirswshgevkkpetinyrtfkperdglfcakifgpikdyeclcgkykrlkhrgvvcercgveveqakvrrermghidlvcpvvhiwylkslpsriglfldmplknvekvlyfesyivtdpgmtplekkqlltdeeyaealenygyefeasmgaeairdlladtdieseiellqaeceeskstakkeKaikrlrlletfqasgnkpewmvmtvlpvlppdlrplvpieggrfatsdlndlyrrvinrnnrlkklldlnapdiivrnekrmlqeavdalldngrrgravtgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpslrlhecglpkkmalelfkpfvysklrlgghattikqakrmveleeavvwdiletvinehpvllnraptlhrlgiqafeprliegkaiqlhplvcaafnadfdgdqmavhvpltvesqlearvlmmstnnilspasgqpiitptqdivlglyyitrekegargegklfssyedvsraynsgtidihakiklridrqvfdtkgntynekgvvnttvgralllnilpeglsfsllnkvlvkkeiskiinqafrvlggkatvvladklmyagfkystlsgvsvgvddmtipdnkeakieeaekeikqiteqyqsslitenerynniiniwsktsdevgasmmdaiskdtvsingekkeiesfnsvymmaksgargsynqmrqlagmrglmakpdgtmietaitanfreglsvlqyftsthgarkgladtalktanagyltrrlvdvaqdlvvieedcgtddglmfsaivedgevkvplveralgrtlaadvvtekgvvlleagtlldenlvellddngidmikvrspitcktrrglcakcygrdlarerqvnvgesvgviaaqsigepgtqltmglprvaelfearrpkdaailspcdgmvrlgnrdtkekqrieiidknghiveeillpksrhlvvfdgeqvsrgdvladgptdphdllkykgleefadyilieaqsvyrmqgvvindkhietivrqmlrkavildegdskfvkdesielvrileendklrkqgkkeveyelvlmgitrsslstesflsaasfqettrvlteasinsqidnlrglkenvligrlipagtglavrkesakiekmre >6wmr_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=F. TULARENSIS RNAPS70-(MGLA-SSPA)-IGLA DNA COMPLEX organism=? DNA sequence DG(J3):DC(X25) DC(J4):DG(X24) DC(J5):DG(X23) DC(J7):DG(X21) DG(J8):DC(X20) DT(J9):DA(X19) DC(J10):DG(X18) DA(J11):DT(X17) DG(J12):DC(X16) DA(J13):DT(X15) chainD (199) ALA210 2 0 0 0 0 0 0 0 0 0 prot.sequence skkfdiikislaspevirswshgevkkpetinyrtfkperdglfcakifgpikdyeclcgkykrlkhrgvvcercgveveqakvrrermghidlvcpvvhiwylkslpsriglfldmplknvekvlyfesyivtdpgmtplekkqlltdeeyaealenygyefeasmgaeairdlladtdieseiellqaeceeskstAkkekaikrlrlletfqasgnkpewmvmtvlpvlppdlrplvpieggrfatsdlndlyrrvinrnnrlkklldlnapdiivrnekrmlqeavdalldngrrgravtgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpslrlhecglpkkmalelfkpfvysklrlgghattikqakrmveleeavvwdiletvinehpvllnraptlhrlgiqafeprliegkaiqlhplvcaafnadfdgdqmavhvpltvesqlearvlmmstnnilspasgqpiitptqdivlglyyitrekegargegklfssyedvsraynsgtidihakiklridrqvfdtkgntynekgvvnttvgralllnilpeglsfsllnkvlvkkeiskiinqafrvlggkatvvladklmyagfkystlsgvsvgvddmtipdnkeakieeaekeikqiteqyqsslitenerynniiniwsktsdevgasmmdaiskdtvsingekkeiesfnsvymmaksgargsynqmrqlagmrglmakpdgtmietaitanfreglsvlqyftsthgarkgladtalktanagyltrrlvdvaqdlvvieedcgtddglmfsaivedgevkvplveralgrtlaadvvtekgvvlleagtlldenlvellddngidmikvrspitcktrrglcakcygrdlarerqvnvgesvgviaaqsigepgtqltmglprvaelfearrpkdaailspcdgmvrlgnrdtkekqrieiidknghiveeillpksrhlvvfdgeqvsrgdvladgptdphdllkykgleefadyilieaqsvyrmqgvvindkhietivrqmlrkavildegdskfvkdesielvrileendklrkqgkkeveyelvlmgitrsslstesflsaasfqettrvlteasinsqidnlrglkenvligrlipagtglavrkesakiekmre >6wmt_CKLZ: title=F. TULARENSIS RNAPS70-(MGLA-SSPA)-PPGPP-PIGR-IGLA DNA COMPLEX organism=FRANCISELLA TULARENSIS SUBSP. HOLARCTICA LVS DNA sequence DA(G1):DT(H42) DT(G2):DA(H41) DT(G3):DA(H40) DT(G4):DA(H39) DA(G5):DT(H38) DG(G6):DC(H37) DC(G7):DG(H36) DT(G8):DA(H35) DG(G9):DC(H34) DT(G10):DA(H33) DA(G11):DT(H32) DT(G12):DA(H31) DA(G13):DT(H30) DA(G14):DT(H29) DA(G15):DT(H28) DC(G16):DG(H27) DA(G17):DT(H26) DT(G18):DA(H25) DT(G19):DA(H24) DG(G20):DC(H23) DT(G21):DA(H22) DG(G22):DC(H21) DT(G23):DA(H20) DT(G24):DA(H19) DA(G25):DT(H18) DT(G26):DA(H17) DT(G27):DA(H16) DG(G28):DC(H15) DG(G29):DC(H14) DC(G30):DG(H13) DG(G31):DC(H12) DT(G32):DA(H11) DT(G33):DA(H10) DA(G34):DT(H9) DT(G35):DA(H8) DT(G36):DA(H7) DA(G37):DT(H6) DA(G38):DT(H5) DG(G39):DC(H4) DG(G40):DC(H3) DT(G41):DA(H2) DA(G42):DT(H1) chainC chainK ( 47) ALA296 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ALA297 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL chainZ (254) ARG361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (276) PHE383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (287) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (290) TRP397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (291) TRP398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 (294) GLN401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 23 0 (297) THR404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (298) ARG405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 (312) HIS419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (315) GLU422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (318) ASN425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 (322) ARG429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (444) GLU551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 16 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ARG552 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) ARG554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) GLN555 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence msysyaekkrirkefgvlphildvpyllsiqtesykkfltvdaakgrlhsgleivlkqsfpveskngqyelhyvdyqigeptfdetecqvrgatydaplnvklrlvvynkdalpnekivedireeyvymgdiplmttngtfiingtervvvsqlhrspgaffskddseegafsariipyrgswldfefdskgiiwaridrkrkfcatvilkalgrgryisdtlkydltrntdealveiykvlrpgdppaaasvkalfeglffiesryslsdigrmklnarlgsdkvskdiytlensdivgvieelinirdgkgkvddidhlgnrrvrsvgemvenqfriglyrvekgiresmslvhkdklmpkdivnskpitaaikefftsgalsqfmdqdnplsevthkrrisalgpgglsrdragfevrdvhathygrlcpietpegpniglinslasyarvndygfleapyrkvvdgkvtdeieylsaidednyviaqastkldennhfvediiqcrsggeaiftessrvqymdvsakqmvsaaaalipflehddanrvlmganmqrqavptlksekplvgtgmekivardsgnciiarnvgevaevdsnrivikvdteksqtsnlvdiysltkfkrsnkntcinqrpivnvgdkveagdiladgfatdfgelslghnlmvafmpwngynfedsillserivkddkytsihieeftcvardtklgpeeitadipnvsesslakldesgivhiganveagdilvakitpkaeqqltpeerllraifnekasnvvdsslrmpsgtsgtvinvqvfendkggkskralkiekelidkarkdfdeefaviesvvkssieqevvgekvqnareyyeeakiaidakfeakkksitqsnelspgvlktvkvfvaikkriqpgdkmagrhgnkgvvsrvlpvedmpymedgtpvdvclnplgipsrmnigqileahlglasyglgkkiektlektrkaaelrktleevynsvgdkkvnlealndeeiltlcdnlkggvpiatpvfdgakeediksllkiggfatngqmklfdgrtgkpfdrhvtvgymymlkldhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwalqaygaaytlremltvksddiagrskmyknivdgkltmnvdvpesfnvlrnevralgidmdfdysse/xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxXXxxxxxxxxxxxxxxxxxxxxxxxxx/xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxXXxxxxxxxxxxxxxxxxxxxxxxxxx/lkgktsdpirmymremgivdlldkkgetdiairieegttevfstilsypiviktyierfreleekaidymnsenepvaryirfnetqrayefftnlekmfeeyqdkpnkklytkivkefdnlrlstshlqklvdyirlpyarvkeferkilrlcversktprqefikvykvgslewlepltkkykftentireiknltkqinqfqilmmmdieelkqvnleisrseakitqakkemieanlrlvvseakkytnRglhfldiiqegniglmkavdkFdyrkgfkfstYatWWirQaiTRsiadqartirvpvHmiEtiNkvnRikrqilqekgreateeeiiehtpnmskeklkkilnishtpismespigddedstvgdfiedknnyspieaanlenlreaikelietgltereakvlmmrfgigmntdhtleevgkqfnvtrERiRQieakalrklkhpsrsaflktfl >6wox_CDF: title=THERMUS THERMOPHILUS RNA POLYMERASE INITIALLY TRANSCRIBING COMPLEX WITH 2'DCTP organism=THERMUS THERMOPHILUS DNA sequence DT(G3):DA(H25) DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) DG(G14):DG(H14) DT(G15):DT(H13) DG(G16):DC(H12) DC(G17):DG(H11) DA(G18):DA(H10) DG(G19):DG(H9) chainC (135) ARG142 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (160) LYS167 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 (163) PRO170 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (164) TRP171 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 (180) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 (236) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 (249) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 (253) LEU260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (259) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 (318) ILE325 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (319) ASP326 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (324) ARG331 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (411) LEU418 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (414) GLU421 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 (415) ARG422 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 (419) ASP426 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (420) VAL427 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 chainD (626) ARG628 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (703) ALA705 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (704) PRO706 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chainF ( 2) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 5) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (247) GLU324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 (249) ASP326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 (250) SER327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (255) PHE332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpKrgPWidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavaYvygLiadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtrERagfDVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivkryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpvRqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdEkDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6wox_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THERMUS THERMOPHILUS RNA POLYMERASE INITIALLY TRANSCRIBING COMPLEX WITH 2'DCTP organism=THERMUS THERMOPHILUS DNA sequence DT(G3):DA(H25) DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) DG(G14):DG(H14) DT(G15):DT(H13) DG(G16):DC(H12) DC(G17):DG(H11) DA(G18):DA(H10) DG(G19):DG(H9) chainD (626) ARG628 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (703) ALA705 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (704) PRO706 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivkryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea >6woy_CDF: title=THERMUS THERMOPHILUS RNA POLYMERASE INITIALLY TRANSCRIBING COMPLEX WITH 3'DCTP organism=THERMUS THERMOPHILUS DNA sequence DG(H9):DG(G19) DA(H10):DA(G18) DG(H11):DC(G17) DC(H12):DG(G16) DT(H13):DT(G15) DG(H14):DG(G14) DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) DC(H24):DG(G4) DA(H25):DT(G3) chainC (135) ARG142 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (160) LYS167 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) PRO170 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (164) TRP171 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 (180) ASN187 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) ARG243 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) TYR256 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) LEU260 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ARG266 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ILE325 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (319) ASP326 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 (324) ARG331 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (411) LEU418 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (414) GLU421 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 (415) ARG422 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (419) ASP426 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (420) VAL427 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 chainD (626) ARG628 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainF ( 2) ASP79 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG82 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) GLU324 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ASP326 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) SER327 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) PHE332 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpKrgPWidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavaYvygLiadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtrERagfDVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivkryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpvRqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdEkDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >6woy_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THERMUS THERMOPHILUS RNA POLYMERASE INITIALLY TRANSCRIBING COMPLEX WITH 3'DCTP organism=? DNA sequence DT(G3):DA(H25) DG(G4):DC(H24) DC(G5):DG(H23) DA(G6):DT(H22) DT(G7):DA(H21) DC(G8):DG(H20) DC(G9):DG(H19) DG(G10):DC(H18) DT(G11):DA(H17) DG(G12):DC(H16) DA(G13):DT(H15) DG(G14):DG(H14) DT(G15):DT(H13) DG(G16):DC(H12) DC(G17):DG(H11) DA(G18):DA(H10) DG(G19):DG(H9) chainD (626) ARG628 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (704) PRO706 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivkryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea >6wpa_A:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=STRUCTURE OF AVAR1 BOUND TO DNA HALF-SITE organism=STREPTOMYCES AVERMITILIS DNA sequence DG(M1) DC(M2) DA(M3) DA(M4) DG(M5) DA(M6) DT(M7) DA(M8) DC(M9) DG(M10) DT(M11) DA(M12) DC(M13) DT(M14) DA(M15) DG(M16) DT(M17) DA(M18) DC(M19) DG(M20) DT(M21) DA(M22) DT(M23) DC(M24) DT(M25) DT(M26) DG(M27) DC(M28) chainA ( 4) ARG7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 41) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 0 0 ( 45) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rqeRairtrqtilvaaaevfdevgyeaatisdvlkrsgvtKgalYfhftskqelaqavlaeqvaslprvpeqelklqqsldealllahllregtgdpivqgsvrltvdqgsprdhlnrrvpmqawtehtqslfeearakgeilphadvealaklfvgaftgvqvlsrimtgradlaervadlyrhlmpsfampgilvrldfspergsrvyeaamk >6wpa_AD:Tetracyclin_repressor-like,_C-terminal_domain;Homeodomain-like; title=STRUCTURE OF AVAR1 BOUND TO DNA HALF-SITE organism=STREPTOMYCES AVERMITILIS DNA sequence DG(M1) DC(M2) DA(M3) DA(M4) DG(M5) DA(M6) DT(M7) DA(M8) DC(M9) DG(M10) DT(M11) DA(M12) DC(M13) DT(M14) DA(M15) DG(M16) DT(M17) DA(M18) DC(M19) DG(M20) DT(M21) DA(M22) DT(M23) DC(M24) DT(M25) DT(M26) DG(M27) DC(M28) chainA ( 4) ARG7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 41) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 0 0 ( 45) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence rqeRairtrqtilvaaaevfdevgyeaatisdvlkrsgvtKgalYfhftskqelaqavlaeqvaslprvpeqelklqqsldealllahllregtgdpivqgsvrltvdqgsprdhlnrrvpmqawtehtqslfeearakgeilphadvealaklfvgaftgvqvlsrimtgradlaervadlyrhlmpsfampgilvrldfspergsrvyeaamk/eraIrtrqtilvaaaevfdevgyeaatisdvlkrsgvtkgAlyfHftskqelaqavlaeqvaslprvpeqelklqqsldealllahllregtgdpivqgsvrltvdqgsprdhlnrrvpmqawtehtqslfeearakgeilphadvealaklfvgaftgvqvlsrimtgradlaervadlyrhlmpsfampgilvrldfspergsrvyeaamk >6wpf_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA AND D4T organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) DG(P822):DG(T707) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 (115) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (155) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (181) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 (182) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (354) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (446) ARG448 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (473) GLN475 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsintpgiryqynvlpqgwkgsPaifQssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagir/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdhpaglkkkksvtVldvgdayfsvpldedfrkytAftipsinnetpgiryqynvlpqgwkgspaifqssmtkilEpfrKqnpdiviyqymddlyvgsdleIGqhrtkieelrqhllrelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkFklpiqketwetwwteywqatwipewefvntpplvklwyql >6wph_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA AND (-)-FTC organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) DG(P822):DG(T707) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (115) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (149) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (175) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 (176) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (348) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (440) ARG448 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) GLN475 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagi >6wph_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA AND (-)-FTC organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) DG(P822):DG(T707) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (115) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (149) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (175) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 (176) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (348) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (440) ARG448 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) GLN475 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipiryqynvlpqgwkgsPaifqssmtkilepfrkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagi/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkstkwrklvdfrelnkrtqdhpaglkkkksvtvlDvgdayfsvpldedfrkytafTipsinnetpgiryqynvlpqgwkgspaifqssmTkilepfrkqnpdiviyqymddlyvgSDleigqhrtkieelrqhllrelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgKtpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >6wpj_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DSDNA AND D4T organism=? DNA sequence DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DC(P818):DC(T711) DG(P819):DG(T710) DC(P820):DC(T709) DC(P821):DG(T708) chainA ( 94) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 (183) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (356) ARG356 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (448) ARG448 3 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnrgrqkvvtltdttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvdklvsagir/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdhpaglkkkksvtVldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigQhrtkieelrqhllrelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfkLpiqketwetwwteywqatwipewefvntpplvklwyql >6wq0_l: title=CRYO-EM OF THE S. SOLFATARICUS ROD-SHAPED VIRUS, SSRV1 organism=? DNA sequence DA(71):DT(8348) DT(72):DA(8347) DA(73):DT(8346) DT(74):DA(8345) DA(75):DT(8344) DT(76):DA(8343) DA(77):DT(8342) DT(78):DA(8341) DA(79):DT(8340) DT(710):DA(8339) DA(711):DT(8338) DT(712):DA(8337) DA(713):DT(8336) DT(714):DA(8335) DA(715):DT(8334) DT(716):DA(8333) DA(717):DT(8332) DT(718):DA(8331) DA(719):DT(8330) DT(720):DA(8329) DA(721):DT(8328) DT(722):DA(8327) DA(723):DT(8326) DT(724):DA(8325) DA(725):DT(8324) DT(726):DA(8323) DA(727):DT(8322) DT(728):DA(8321) DA(729):DT(8320) DT(730):DA(8319) DA(731):DT(8318) DT(732):DA(8317) DA(733):DT(8316) DT(734):DA(8315) DA(735):DT(8314) DT(736):DA(8313) DA(737):DT(8312) DT(738):DA(8311) DA(739):DT(8310) DT(740):DA(8309) DA(741):DT(8308) DT(742):DA(8307) DA(743):DT(8306) DT(744):DA(8305) DA(745):DT(8304) DT(746):DA(8303) DA(747):DT(8302) DT(748):DA(8301) DA(749):DT(8300) DT(750):DA(8299) DA(751):DT(8298) DT(752):DA(8297) DA(753):DT(8296) DT(754):DA(8295) DA(755):DT(8294) DT(756):DA(8293) DA(757):DT(8292) DT(758):DA(8291) DA(759):DT(8290) DT(760):DA(8289) DA(761):DT(8288) DT(762):DA(8287) DA(763):DT(8286) DT(764):DA(8285) DA(765):DT(8284) DT(766):DA(8283) DA(767):DT(8282) DT(768):DA(8281) DA(769):DT(8280) DT(770):DA(8279) DA(771):DT(8278) DT(772):DA(8277) DA(773):DT(8276) DT(774):DA(8275) DA(775):DT(8274) DT(776):DA(8273) DA(777):DT(8272) DT(778):DA(8271) DA(779):DT(8270) DT(780):DA(8269) DA(781):DT(8268) DT(782):DA(8267) DA(783):DT(8266) DT(784):DA(8265) DA(785):DT(8264) DT(786):DA(8263) DA(787):DT(8262) DT(788):DA(8261) DA(789):DT(8260) DT(790):DA(8259) DA(791):DT(8258) DT(792):DA(8257) DA(793):DT(8256) DT(794):DA(8255) DA(795):DT(8254) DT(796):DA(8253) DA(797):DT(8252) DT(798):DA(8251) DA(799):DT(8250) DT(7100):DA(8249) DA(7101):DT(8248) DT(7102):DA(8247) DA(7103):DT(8246) DT(7104):DA(8245) DA(7105):DT(8244) DT(7106):DA(8243) DA(7107):DT(8242) DT(7108):DA(8241) DA(7109):DT(8240) DT(7110):DA(8239) DA(7111):DT(8238) DT(7112):DA(8237) DA(7113):DT(8236) DT(7114):DA(8235) DA(7115):DT(8234) DT(7116):DA(8233) DA(7117):DT(8232) DT(7118):DA(8231) DA(7119):DT(8230) DT(7120):DA(8229) DA(7121):DT(8228) DT(7122):DA(8227) DA(7123):DT(8226) DT(7124):DA(8225) DA(7125):DT(8224) DT(7126):DA(8223) DA(7127):DT(8222) DT(7128):DA(8221) DA(7129):DT(8220) DT(7130):DA(8219) DA(7131):DT(8218) DT(7132):DA(8217) DA(7133):DT(8216) DT(7134):DA(8215) DA(7135):DT(8214) DT(7136):DA(8213) DA(7137):DT(8212) DT(7138):DA(8211) DA(7139):DT(8210) DT(7140):DA(8209) DA(7141):DT(8208) DT(7142):DA(8207) DA(7143):DT(8206) DT(7144):DA(8205) DA(7145):DT(8204) DT(7146):DA(8203) DA(7147):DT(8202) DT(7148):DA(8201) DA(7149):DT(8200) DT(7150):DA(8199) DA(7151):DT(8198) DT(7152):DA(8197) DA(7153):DT(8196) DT(7154):DA(8195) DA(7155):DT(8194) DT(7156):DA(8193) DA(7157):DT(8192) DT(7158):DA(8191) DA(7159):DT(8190) DT(7160):DA(8189) DA(7161):DT(8188) DT(7162):DA(8187) DA(7163):DT(8186) DT(7164):DA(8185) DA(7165):DT(8184) DT(7166):DA(8183) DA(7167):DT(8182) DT(7168):DA(8181) DA(7169):DT(8180) DT(7170):DA(8179) DA(7171):DT(8178) DT(7172):DA(8177) DA(7173):DT(8176) DT(7174):DA(8175) DA(7175):DT(8174) DT(7176):DA(8173) DA(7177):DT(8172) DT(7178):DA(8171) DA(7179):DT(8170) DT(7180):DA(8169) DA(7181):DT(8168) DT(7182):DA(8167) DA(7183):DT(8166) DT(7184):DA(8165) DA(7185):DT(8164) DT(7186):DA(8163) DA(7187):DT(8162) DT(7188):DA(8161) DA(7189):DT(8160) DT(7190):DA(8159) DA(7191):DT(8158) DT(7192):DA(8157) DA(7193):DT(8156) DT(7194):DA(8155) DA(7195):DT(8154) DT(7196):DA(8153) DA(7197):DT(8152) DT(7198):DA(8151) DA(7199):DT(8150) DT(7200):DA(8149) DA(7201):DT(8148) DT(7202):DA(8147) DA(7203):DT(8146) DT(7204):DA(8145) DA(7205):DT(8144) DT(7206):DA(8143) DA(7207):DT(8142) DT(7208):DA(8141) DA(7209):DT(8140) DT(7210):DA(8139) DA(7211):DT(8138) DT(7212):DA(8137) DA(7213):DT(8136) DT(7214):DA(8135) DA(7215):DT(8134) DT(7216):DA(8133) DA(7217):DT(8132) DT(7218):DA(8131) DA(7219):DT(8130) DT(7220):DA(8129) DA(7221):DT(8128) DT(7222):DA(8127) DA(7223):DT(8126) DT(7224):DA(8125) DA(7225):DT(8124) 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>6wq2_J: title=CRYO-EM OF THE S. 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DA(1229):DT(2276) DT(1230):DA(2275) DA(1231):DT(2274) chainJ ( 3) ASN5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) TRP57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) TYR61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) LYS68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) LEU87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ALA90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLU93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rrNrrlssasvyrYylkRismnigttghvnglsiagnpeimraiarlseqetynWvtdYapshlaKevvkqisgkynipgayqgLlmAfaEkvlanyildykgeplveihhnflwelmqgfiytfvrkdgkpvtvdmskvlteiedalfklvkk >6wqu_C:p53-like_transcription_factors;DNA-binding_protein_LAG-1_CSL;E_set_domains; title=CSL (RBPJ) BOUND TO NOTCH3 RAM AND DNA organism=MUS MUSCULUS DNA sequence DA(B18):DT(A15) DC(B19):DG(A14) DC(B20):DG(A13) DG(B21):DC(A12) DT(B22):DA(A11) DG(B23):DC(A10) DG(B24):DC(A9) DG(B25):DC(A8) DA(B26):DT(A7) DA(B27):DT(A6) DA(B28):DT(A5) DG(B29):DC(A4) DA(B30):DT(A3) chainC ( 35) TYR86 0 0 0 0 0 0 0 3 10 0 0 0 0 ( 38) GLU89 0 0 0 0 4 1 1 0 0 0 0 0 0 ( 40) ARG91 0 0 0 0 10 10 2 0 0 0 0 0 0 (140) SER191 0 0 0 0 0 0 0 0 2 2 0 0 0 (141) LYS192 0 0 0 0 0 0 2 7 8 2 0 0 0 (144) LYS195 0 0 0 0 0 0 0 2 0 0 0 0 0 (170) SER221 0 0 0 1 1 0 0 0 0 0 0 0 0 (171) GLN222 0 2 11 4 0 0 0 0 0 0 0 0 0 prot.sequence sppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpsKkkqslknadlciasgtkvalfnrlrSQtvstrylhveggnfhassqqwgafyihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkeqnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgviystsltftytpe >6wvj_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF BACILLUS SUBTILIS RNA POLYMERASE ELONGATION COMPLEX organism=BACILLUS SUBTILIS DNA sequence DT(T4):DA(N12) DG(T5):DC(N11) DT(T6):DA(N10) DC(T7):DG(N9) DG(T8):DC(N8) DG(T9):DC(N7) DG(T10):DC(N6) DC(T11):DG(N5) DG(T12):DC(N4) DT(T13):DA(N3) chainC (483) GLU497 0 0 0 0 0 0 0 0 0 1 prot.sequence tgqlvqygrhrqrrsyarisevlelpnlieiqtssyqwfldeglremfqdispiedftgnlslefidyslgepkypveeskerdvtysaplrvkvrlinketgevkdqdvfmgdfpimtdtgtfiingaervivsqlvrspsvyfsgkvdkngkkgftatvipnrgawleyetdakdvvyvridrtrklpvtvllralgfgsdqeildligeneylrntldkdntensdkalleiyerlrpgepptvenakslldsrffdpkrydlanvgrykinkklhiknrlfnqrlaetlvdperrtldkvlpylengigfrklypnggvvedevtlqsikifaptdqegeqvinvignayieeeiknitpadiissisyffnllhgvgdtddidhlgnrrlrsvgellqnqfriglsrmervvrermsiqdtntitpqqlinirpviasikeffgssqlsqfmdqtnplaelthkrrlsalgpggltrEragmevrdvhyshygrmcpietpegpniglinslssyakvnrfgfietpyrrvdpetgkvtgridyltadeednyvvaqanarlddegafiddsivarfrgentvvsrnrvdymdvspkqvvsaatacipflenddsnralmganmqrqavplmqpeapfvgtgmeyvsgkdsgaavickhpgiverveaknvwvrryeevdgqkvkgnldkysllkfvrsnqgtcynqrpivsvgdevvkgeiladgpsmelgelalgrnvmvgfmtwdgynyedaiimserlvkddvytsihieeyeseardtklgpeeitrdipnvgedalrnlddrgiirigaevkdgdllvgkvtpevrdtslrvphggggiihdvkvfnredgdelppgvnqlvrvyivqkrkisegdkmagrhgnkgviskilpeedmpylpdgtpidimlnplgvpsrmnigqvlelhmgmaarylgihiaspvfdgareedvwetleeagmsrdaktvlydgrtgepfdnrvsvgimymiklahmvddklharstgpyslvtqqplggkaqfggqrfgemevwaleaygaaytlqeiltvksddvvgrvktyeaivkgdnvpepgvpesfkvlikelqslgmdvkilsgdeeeie >6wvj_CD: title=CRYO-EM STRUCTURE OF BACILLUS SUBTILIS RNA POLYMERASE ELONGATION COMPLEX organism=BACILLUS SUBTILIS DNA sequence DT(T4):DA(N12) DG(T5):DC(N11) DT(T6):DA(N10) DC(T7):DG(N9) DG(T8):DC(N8) DG(T9):DC(N7) DG(T10):DC(N6) DC(T11):DG(N5) DG(T12):DC(N4) DT(T13):DA(N3) chainC (483) GLU497 0 0 0 0 0 0 0 0 0 1 chainD prot.sequence tgqlvqygrhrqrrsyarisevlelpnlieiqtssyqwfldeglremfqdispiedftgnlslefidyslgepkypveeskerdvtysaplrvkvrlinketgevkdqdvfmgdfpimtdtgtfiingaervivsqlvrspsvyfsgkvdkngkkgftatvipnrgawleyetdakdvvyvridrtrklpvtvllralgfgsdqeildligeneylrntldkdntensdkalleiyerlrpgepptvenakslldsrffdpkrydlanvgrykinkklhiknrlfnqrlaetlvdperrtldkvlpylengigfrklypnggvvedevtlqsikifaptdqegeqvinvignayieeeiknitpadiissisyffnllhgvgdtddidhlgnrrlrsvgellqnqfriglsrmervvrermsiqdtntitpqqlinirpviasikeffgssqlsqfmdqtnplaelthkrrlsalgpggltrEragmevrdvhyshygrmcpietpegpniglinslssyakvnrfgfietpyrrvdpetgkvtgridyltadeednyvvaqanarlddegafiddsivarfrgentvvsrnrvdymdvspkqvvsaatacipflenddsnralmganmqrqavplmqpeapfvgtgmeyvsgkdsgaavickhpgiverveaknvwvrryeevdgqkvkgnldkysllkfvrsnqgtcynqrpivsvgdevvkgeiladgpsmelgelalgrnvmvgfmtwdgynyedaiimserlvkddvytsihieeyeseardtklgpeeitrdipnvgedalrnlddrgiirigaevkdgdllvgkvtpevrdtslrvphggggiihdvkvfnredgdelppgvnqlvrvyivqkrkisegdkmagrhgnkgviskilpeedmpylpdgtpidimlnplgvpsrmnigqvlelhmgmaarylgihiaspvfdgareedvwetleeagmsrdaktvlydgrtgepfdnrvsvgimymiklahmvddklharstgpyslvtqqplggkaqfggqrfgemevwaleaygaaytlqeiltvksddvvgrvktyeaivkgdnvpepgvpesfkvlikelqslgmdvkilsgdeeeie/vnnfeymniglaspdkirswsfgevkkpetinyrtlkpekdglfcerifgptkdwechcgkykrvrykgvvcdrcgvevtrakvrrermghielaapvshiwyfkgipsrmglvldmspraleeviyfasyvvtdpantplekkqllsekeyrayldkygnkfqasmgaeaihkllqdidlvkevdmlkeelktsqgqrrtraikrlevleafrnsgnkpswmildvlpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlldlgapsiivqnekrmlqeavdalidngrrgrpvtgpgnrplkslshmlkgkqgrfrqnllgkrvdysgrsvivvgphlkmyqcglpkemalelfkpfvmkelvekglahniksakrkiervqpevwdvlesvikehpvllnraptlhrlgiqafeptlvegrairlhplvctaynadfdgdqmavhvplsaeaqaearilmlaaqnilnpkdgKpvvtpsqdmvlgnyyltleragavgegmvfkntdeallayqngyvhlhtrvavaanslknvtfteeqrskllittvgklvfneilpesfpymneptksnieektpdrfflekgadvkaviaqqpinapfkkgilgkiiaeifkrfhitetskmldrmknlgfkystkagitvgvsdivvlddkqeileeaqskvdnvmkqfrrgliteeeryervisiwsaakdviqgklmksldelnpiymmsdsgargnasnftqlagmrglmanpagriielpikssfregltvleyfisthgarkgladtalktadsgyltrrlvdvaqdviiretdcgtdrgilakplkegtetierleerligrfarkqvkhpetgevlvnenelidedkaleiveagieevwirsaftcntphgvckrcygrnlatgsdvevgeavgiiaaqsigepgtqltmrtgdditqglpriqelfearnpkgqatiteidgtvveinevrdkqqeivvqgavetrsytapynsrlkvaegdkitrgqvltegsidpkellkvtdlttvqeyllhevqkvyrmqgveigdkhvevmvrqmlrkvrvidagdtdvlpgtlldihqfteankkvllegnrpatgrpvllgitkasletdsflsaasfqettrvltdaaikgkrdellglkenviigklvpagtgmmkyrkvkpv >6wya_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RTX (REVERSE TRANSCRIPTION XENOPOLYMERASE) IN COMPLEX WITH A DNA DUPLEX AND DAMPNPP organism=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) / Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) DNA sequence DC(C2):DG(B22) DA(C3):DT(B21) DG(C4):DC(B20) DT(C5):DA(B19) DT(C6):DA(B18) DG(C7):DC(B17) DT(C8):DA(B16) DG(C9):DC(B15) DG(C10):DC(B14) DT(C11):DA(B13) DC(C12):DG(B12) DG(C13):DC(B11) DT(C14):DA(B10) DA(C15):DT(B9) DT(C16):DA(B8) DG(C17):DC(B7) DC(C18):DG(B6) DC(C19):DG(B5) DT(C20):DA(B4) chainA (494) TYR494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (541) THR541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (592) LYS592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 (612) ARG612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepylyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpaimdkirehpavidiyeydipfairylidkglvpmegdeelkllafdietlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlitydgdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrhqsheggyikeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkrmkatidpierklldyrqraikilanslYgyygyararwyckecaesviawgreyltmtikeieekygfkviysdTdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrglfvtkKKyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklvihkqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrivdraipfdefdptkhkydaeyyiekqvlpaverilrafgyrkedlr >6wyb_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=RTX (REVERSE TRANSCRIPTION XENOPOLYMERASE) IN COMPLEX WITH AN RNA/DNA HYBRID organism=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) / Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) DNA sequence DT(C1) DG(C2) DG(C3) DT(C4) DC(C5) DG(C6) DT(C7) DA(C8) DT(C9) DG(C10) DC(C11) DC(C12) chainA (585) LYS592 0 0 0 0 0 0 0 0 0 4 3 0 (605) ARG612 0 0 0 0 0 0 0 3 6 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepylyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpaimdkirehpavidiyeydipfairylidkglvpmegdeelkllafdietlyefaegpilmisyadeegarvitwdlpyvdvvsteremikrflrvvkekdpdvlitydgdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrhqsheggyikeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkrmkatidpierklldyrqraikilanslygyygyararwyckecaesviawgreyltmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrglfvtkKkyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppihkqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrivdraipfdekydaeyyiekqvlpaverilrafgyrkedlr >6wz5_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=BRIDGING OF DOUBLE-STRAND DNA BREAK ACTIVATES PARP2/HPF1 TO MODIFY CHROMATIN organism=XENOPUS LAEVIS DNA sequence DT(I-76):DA(J76) DG(I-75):DC(J75) DC(I-74):DG(J74) DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) DG(I74):DC(J-74) DG(I75):DC(J-75) DC(I76):DG(J-76) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrDNiqgitkpairrlarrggvkrisgLiyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfg/tRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/krRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrDNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfg/tRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/krRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6wz5_G:Histone-fold; title=BRIDGING OF DOUBLE-STRAND DNA BREAK ACTIVATES PARP2/HPF1 TO MODIFY CHROMATIN organism=? DNA sequence DG(J-76):DC(I76) DC(J-75):DG(I75) DC(J-74):DG(I74) DC(J-73):DG(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) DG(J74):DC(I-74) DC(J75):DG(I-75) DA(J76):DT(I-76) chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk >6wz9_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=BRIDGING OF DOUBLE-STRAND DNA BREAK ACTIVATES PARP2/HPF1 TO MODIFY CHROMATIN organism=XENOPUS LAEVIS DNA sequence DC(I-74):DG(J74) DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainA ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainB chainC chainD ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/dNIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/tRSsraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/hRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/dNIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfg/Rakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvll/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >6wz9_H:Histone-fold; title=BRIDGING OF DOUBLE-STRAND DNA BREAK ACTIVATES PARP2/HPF1 TO MODIFY CHROMATIN organism=XENOPUS LAEVIS DNA sequence DC(I-74):DG(J74) DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >6x0l_PR:WGR_domain-like; title=BRIDGING OF DOUBLE-STRAND DNA BREAK ACTIVATES PARP2/HPF1 TO MODIFY CHROMATIN organism=HOMO SAPIENS DNA sequence DG(J74):DC(I-74) DC(J75):DG(I-75) DA(J76):DT(I-76) DT(J77):DA(I-77) DG(J78):DC(I-78) DT(J79):DA(I-79) DA(J80):DT(I-80) DT(J81):DA(I-81) DT(J82):DA(I-82) DG(J83):DC(I-83) chainP ( 70) GLN146 0 0 0 0 0 0 0 0 1 11 chainR ( 68) GLN146 0 0 0 0 0 0 0 0 0 1 prot.sequence gkapvdpectakvgkahvycegndvydvmlnqtnlqfnnnkyyliqlleddaqrnfsvwmrwgrvgkmgQhslvacsgnlnkakeifqkkfldktknnwedrekfekvpgkydmlqmdykpesqldlrvqeliklicnvqameemmmemkyntkkaplgkltvaqikagyqslkkiedciragqhgralmeacnefytriphdfglrtpplirtqkelsekiqllealgdieiaiklvktelqspehpldqhyrnlhcalrpldhesyefkvisqylqsthapthsdytmtlldlfevekdgekeafredlhnrmllwhgsrmsnwvgilshglriappeapitgymfgkgiyfadmssksanycfasrlkntgllllsevalgqcnelleanpkaegllqgkhstkglgkmapssahfvtlngstvplgpasdtgilnpdgytlnyneyivynpnqvrmryllkvqfnflqlw/apvdpectakvgkahvycegndvydvmlnqtnlqfnnnkyyliqlleddaqrnfsvwmrwgrvgkmgQhslvacsgnlnkakeifqkkfldktknnwedrekfekvpgkydmlq >6x0l_R:WGR_domain-like; title=BRIDGING OF DOUBLE-STRAND DNA BREAK ACTIVATES PARP2/HPF1 TO MODIFY CHROMATIN organism=HOMO SAPIENS DNA sequence DC(I-83):DG(J83) DA(I-82):DT(J82) DA(I-81):DT(J81) DT(I-80):DA(J80) DA(I-79):DT(J79) DC(I-78):DG(J78) DA(I-77):DT(J77) DT(I-76):DA(J76) DG(I-75):DC(J75) DC(I-74):DG(J74) chainR ( 68) GLN146 1 0 0 0 0 0 0 0 0 0 prot.sequence apvdpectakvgkahvycegndvydvmlnqtnlqfnnnkyyliqlleddaqrnfsvwmrwgrvgkmgQhslvacsgnlnkakeifqkkfldktknnwedrekfekvpgkydmlq >6x0m_P:ADP-ribosylation;Domain_of_polyADP-ribose_polymerase;WGR_domain-like; title=BRIDGING OF DOUBLE-STRAND DNA BREAK ACTIVATES PARP2/HPF1 TO MODIFY CHROMATIN organism=HOMO SAPIENS DNA sequence DC(I-83):DG(J83) DA(I-82):DT(J82) DA(I-81):DT(J81) DT(I-80):DA(J80) DA(I-79):DT(J79) DC(I-78):DG(J78) DA(I-77):DT(J77) DT(I-76):DA(J76) DG(I-75):DC(J75) DC(I-74):DG(J74) DA(I-73):DT(J73) DC(I-72):DG(J72) chainP ( 70) GLN146 3 3 0 0 0 0 0 0 0 0 0 0 prot.sequence gkapvdpectakvgkahvycegndvydvmlnqtnlqfnnnkyyliqlleddaqrnfsvwmrwgrvgkmgQhslvacsgnlnkakeifqkkfldktknnwedrekfekvpgkydmlqmdsqldlrvqeliklicnvqameemmmemkyntkkaplgkltvaqikagyqslkkiedciragqhgralmeacnefytriphdfglrtpplirtqkelsekiqllealgdieiaiklvktelqspehpldqhyrnlhcalrpldhesyefkvisqylqsthapthsdytmtlldlfevekdgekeafredlhnrmllwhgsrmsnwvgilshglriappeapitgymfgkgiyfadmssksanycfasrlkntgllllsevalgqcnelleanpkaegllqgkhstkglgkmapssahfvtlngstvplgpasdtgilnpdgytlnyneyivynpnqvrmryllkvqfnflqlw >6x0m_Pp: title=BRIDGING OF DOUBLE-STRAND DNA BREAK ACTIVATES PARP2/HPF1 TO MODIFY CHROMATIN organism=HOMO SAPIENS DNA sequence DG(J72):DC(I-72) DT(J73):DA(I-73) DG(J74):DC(I-74) DC(J75):DG(I-75) DA(J76):DT(I-76) DT(J77):DA(I-77) DG(J78):DC(I-78) DT(J79):DA(I-79) DA(J80):DT(I-80) DT(J81):DA(I-81) DT(J82):DA(I-82) DG(J83):DC(I-83) chainP ( 70) GLN146 0 0 0 0 0 0 0 0 0 0 3 3 chainp prot.sequence gkapvdpectakvgkahvycegndvydvmlnqtnlqfnnnkyyliqlleddaqrnfsvwmrwgrvgkmgQhslvacsgnlnkakeifqkkfldktknnwedrekfekvpgkydmlqmdsqldlrvqeliklicnvqameemmmemkyntkkaplgkltvaqikagyqslkkiedciragqhgralmeacnefytriphdfglrtpplirtqkelsekiqllealgdieiaiklvktelqspehpldqhyrnlhcalrpldhesyefkvisqylqsthapthsdytmtlldlfevekdgekeafredlhnrmllwhgsrmsnwvgilshglriappeapitgymfgkgiyfadmssksanycfasrlkntgllllsevalgqcnelleanpkaegllqgkhstkglgkmapssahfvtlngstvplgpasdtgilnpdgytlnyneyivynpnqvrmryllkvqfnflqlw/apvdpectakvgkahvycegndvydvmlnqtnlqfnnnkyyliqlleddaqrnfsvwmrwgrvgkmgqhSlvacsgnlnkakeifqkkfldktknnwedrekfekvpgkydmlqmdyqldlrvqeliklicnvqameemmmemkyntkkaplgkltvaqikagyqslkkiedciragqhgralmeacnefytriphdfglrtpplirtqkelsekiqllealgdieiaiklvktelqspehpldqhyrnlhcalrpldhesyefkvisqylqsthapthsdytmtlldlfevekdgekeafredlhnrmllwhgsrmsnwvgilshglriappeapitgymfgkgiyfadmssksanycfasrlkntgllllsevalgqcnelleanpkaegllqgkhstkglgkmapssahfvtlngstvplgpasdtgilnpdgytlnyneyivynpnqvrmryllkvqfnflqlw >6x0n_G:Histone-fold; title=BRIDGING OF DOUBLE-STRAND DNA BREAK ACTIVATES PARP2/HPF1 TO MODIFY CHROMATIN organism=? DNA sequence DC(I-83):DG(J83) DA(I-82):DT(J82) DA(I-81):DT(J81) DT(I-80):DA(J80) DA(I-79):DT(J79) DC(I-78):DG(J78) DA(I-77):DT(J77) DT(I-76):DA(J76) DG(I-75):DC(J75) DC(I-74):DG(J74) DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 25 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk >6x0n_PR:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;WGR_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=BRIDGING OF DOUBLE-STRAND DNA BREAK ACTIVATES PARP2/HPF1 TO MODIFY CHROMATIN organism=HOMO SAPIENS DNA sequence DC(I-83):DG(J83) DA(I-82):DT(J82) DA(I-81):DT(J81) DT(I-80):DA(J80) DA(I-79):DT(J79) DC(I-78):DG(J78) DA(I-77):DT(J77) DT(I-76):DA(J76) DG(I-75):DC(J75) DC(I-74):DG(J74) DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainP ( 70) GLN146 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 60) TRP138 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLN146 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gkapvdpectakvgkahvycegndvydvmlnqtnlqfnnnkyyliqlleddaqrnfsvwmrwgrvgkmgQhslvacsgnlnkakeifqkkfldktknnwedrekfekvpgkydmlqmdykpesqldlrvqeliklicnvqameemmmemkyntkkaplgkltvaqikagyqslkkiedciragqhgralmeacnefytriphdfglrtpplirtqkelsekiqllealgdieiaiklvktelqspehpldqhyrnlhcalrpldhesyefkvisqylqsthapthsdytmtlldlfevekdgekeafredlhnrmllwhgsrmsnwvgilshglriappeapitgymfgkgiyfadmssksanycfasrlkntgllllsevalgqcnelleanpkaegllqgkhstkglgkmapssahfvtlngstvplgpasdtgilnpdgytlnyneyivynpnqvrmryllkvqfnflqlw/apvdpectakvgkahvycegndvydvmlnqtnlqfnnnkyyliqlleddaqrnfsvwmrWgrvgkmgQhslvacsgnlnkakeifqkkfldktknnwedrekfekvpgkydmlq >6x1j_A:Homing_endonucleases; title=THE HOMING ENDONUCLEASE I-WCAI BOUND TO ITS DNA RECOGNITION SEQUENCE organism=Wickerhamomyces canadensis DNA sequence DG(D2):DC(C25) DT(D3):DA(C24) DA(D4):DT(C23) DT(D5):DA(C22) DT(D6):DA(C21) DA(D7):DT(C20) DC(D8):DG(C19) DC(D9):DG(C18) DC(D10):DG(C17) DT(D11):DA(C16) DG(D12):DC(C15) DT(D13):DA(C14) DT(D14):DA(C13) DA(D15):DT(C12) DT(D16):DA(C11) DC(D17):DG(C10) DC(D18):DG(C9) DC(D19):DG(C8) DT(D20):DA(C7) DA(D21):DT(C6) DG(D22):DC(C5) DC(D23):DG(C4) DG(D24):DC(C3) DT(D25):DA(C2) chainA ( 12) PRO17 0 0 0 4 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ASN18 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) TYR49 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) LYS51 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) LEU53 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG55 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) GLN62 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLU64 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) TYR89 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG91 0 0 0 0 0 0 0 0 0 18 11 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ASN93 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 89) HIS94 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 94) VAL99 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 96) THR101 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 98) ARG103 0 0 0 0 0 0 0 0 4 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) GLN105 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ASP153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (149) TYR154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 1 0 0 0 0 0 (161) HIS166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 (163) GLN168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (190) ASN195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 7 1 0 0 0 0 0 0 (191) LYS196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 9 0 0 0 0 0 0 0 prot.sequence iinkkdllglgPNsklikdykkqwttlskiqeetlignilgdvYiKkLkRnkhfllQfEwknkayiehivrvfdeyvispptlYeRkNHlgnkViTwRaQtfehkafdklgyyfmenhkkiikpdlvlnyiterslaywfmddggkwDYnkktknkslvlHtQgfkkeeveilindlnikfnlncsikfNKnkpiiyipnkdyelfynlvnpyiipemkykllfnv >6x26_A:P-loop_containing_nucleoside_triphosphate_hydrolases;TRCF_domain-like;CarD-like; title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - L1 STATE organism=? DNA sequence DA(Q210):DT(P155) DC(Q211):DG(P154) DC(Q212):DG(P153) DG(Q213):DC(P152) DC(Q214):DG(P151) DT(Q215):DA(P150) DG(Q216):DC(P149) DC(Q217):DG(P148) DA(Q218):DT(P147) DA(Q219):DT(P146) DG(Q220):DC(P145) DG(Q221):DC(P144) DA(Q223):DT(P142) DT(Q224):DA(P141) DA(Q225):DT(P140) DG(Q226):DC(P139) DG(Q227):DC(P138) DA(Q228):DT(P137) DT(Q229):DA(P136) DA(Q230):DT(P135) DC(Q231):DG(P134) DT(Q232):DA(P133) DT(Q233):DA(P132) DG(Q234):DC(P131) DC(Q235):DG(P130) DG(Q236):DC(P129) DG(Q237):DC(P128) DG(Q238):DC(P127) DC(Q239):DG(P126) DT(Q240):DA(P125) DA(Q241):DT(P124) DT(Q248):DC(P123) DA(Q249):DC(P122) DT(Q250):DT(P121) DG(Q251):DC(P120) DG(Q252):DT(P119) DC(Q253):DC(P118) DG(Q254):DC(P117) DG(Q255):DA(P116) DC(Q256):DT(P115) DG(Q257):DG(P114) DA(Q258):DC(P113) DA(Q259):DG(P112) DT(Q260):DC(P111) DA(Q261):DC(P110) DC(Q262):DG(P109) DC(Q263):DC(P108) DC(Q264):DT(P107) chainA (685) LYS690 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rytlpvkageqrllgeltgaacatlvaeiaerhagpvvliapdmqnalrlhdeisqftdqmvmnladwetlpydsfsphqdiissrlstlyqlptmqrgvlivpvntlmqrvcphsflhghalvmkkgqrlsrdalrtqldsagyrhvdqvmehgeyatrgalldlfpmgselpyrldffddeidslrvfdvdsqrtleeveainllpahefptdkaaielfrsqwrdtfevkrdpehiyqqvskgtlpagieywqplffseplpplfsyfpantllvntgdletsaerfqadtlarfenrgvdpmrpllppqslwlrvdelfselknwprvqlktehlptkaananlgfqklpdlavqaqqkapldalrkfletfdgpvvfsvesegrrealgellarikiapqrimrldeasdrgrylmigaaehgfvdtvrnlalicesdllgervarrrqdsrrtinpdtlirnlaelhigqpvvhlehgvgryagmttleaggitgeylmltyandaklyvpvsslhlisryaggaeenaplhklggdawsrarqkaaekvrdvaaelldiyaqraakegfafkhdreqyqlfcdsfpfettpdqaqainavlsdmcqplamdrlvcgdvgfgktevamraaflavdnhkqvavlvpttllaqqhydnfrdrfanwpvriemisrfrsaKeqtqilaevaegkidiligthkllqsdvkfkdlgllivdeehrfgvrhkerikamranvdiltltatpiprtlnmamsgmrdlsiiatpparrlavktfvreydsmvvreailreilrggqvyylyndveniqkaaerlaelvpeariaighgqmrerelervmndfhhqrfnvlvcttiietgidiptantiiieradhfglaqlhqlrgrvgrshhqayawlltphpkamttdaqkrleaiasledlgagfalathdleirgagellgeeqsgsmetigfslymellenavdalkagrepsledltsqqtevelrmpsllpddfipdvntrlsfykriasakteneleeikvelidrfgllpdpartlldiarlrqqaqklgirklegnekggviefaeknhvnpawligllqkqpqhyrldgptrlkfiqdlserktriewvrqfmreleenai >6x26_AIJ: title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - L1 STATE organism=ESCHERICHIA COLI DNA sequence DG(P101):DC(Q264) DG(P102):DC(Q263) DG(P103):DC(Q262) DT(P104):DA(Q261) DA(P105):DT(Q260) DT(P106):DA(Q259) DT(P107):DA(Q258) DC(P108):DG(Q257) DG(P109):DC(Q256) DC(P110):DG(Q255) DC(P111):DG(Q254) DG(P112):DC(Q253) DC(P113):DG(Q252) DC(P120):DG(Q251) DT(P121):DT(Q250) DC(P122):DA(Q249) DC(P123):DT(Q248) DT(P124):DA(Q241) DA(P125):DT(Q240) DG(P126):DC(Q239) DC(P127):DG(Q238) DC(P128):DG(Q237) DC(P129):DG(Q236) DG(P130):DC(Q235) DC(P131):DG(Q234) DA(P132):DT(Q233) DA(P133):DT(Q232) DG(P134):DC(Q231) DT(P135):DA(Q230) DA(P136):DT(Q229) DT(P137):DA(Q228) DC(P138):DG(Q227) DC(P139):DG(Q226) DT(P140):DA(Q225) DA(P141):DT(Q224) DT(P142):DA(Q223) DC(P144):DG(Q221) DC(P145):DG(Q220) DT(P146):DA(Q219) DT(P147):DA(Q218) DG(P148):DC(Q217) DC(P149):DG(Q216) DA(P150):DT(Q215) DG(P151):DC(Q214) DC(P152):DG(Q213) DG(P153):DC(Q212) DG(P154):DC(Q211) DT(P155):DA(Q210) chainA (685) LYS690 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) LYS496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ prot.sequence rytlpvkageqrllgeltgaacatlvaeiaerhagpvvliapdmqnalrlhdeisqftdqmvmnladwetlpydsfsphqdiissrlstlyqlptmqrgvlivpvntlmqrvcphsflhghalvmkkgqrlsrdalrtqldsagyrhvdqvmehgeyatrgalldlfpmgselpyrldffddeidslrvfdvdsqrtleeveainllpahefptdkaaielfrsqwrdtfevkrdpehiyqqvskgtlpagieywqplffseplpplfsyfpantllvntgdletsaerfqadtlarfenrgvdpmrpllppqslwlrvdelfselknwprvqlktehlptkaananlgfqklpdlavqaqqkapldalrkfletfdgpvvfsvesegrrealgellarikiapqrimrldeasdrgrylmigaaehgfvdtvrnlalicesdllgervarrrqdsrrtinpdtlirnlaelhigqpvvhlehgvgryagmttleaggitgeylmltyandaklyvpvsslhlisryaggaeenaplhklggdawsrarqkaaekvrdvaaelldiyaqraakegfafkhdreqyqlfcdsfpfettpdqaqainavlsdmcqplamdrlvcgdvgfgktevamraaflavdnhkqvavlvpttllaqqhydnfrdrfanwpvriemisrfrsaKeqtqilaevaegkidiligthkllqsdvkfkdlgllivdeehrfgvrhkerikamranvdiltltatpiprtlnmamsgmrdlsiiatpparrlavktfvreydsmvvreailreilrggqvyylyndveniqkaaerlaelvpeariaighgqmrerelervmndfhhqrfnvlvcttiietgidiptantiiieradhfglaqlhqlrgrvgrshhqayawlltphpkamttdaqkrleaiasledlgagfalathdleirgagellgeeqsgsmetigfslymellenavdalkagrepsledltsqqtevelrmpsllpddfipdvntrlsfykriasakteneleeikvelidrfgllpdpartlldiarlrqqaqklgirklegnekggviefaeknhvnpawligllqkqpqhyrldgptrlkfiqdlserktriewvrqfmreleenai/vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveRavkerlslgdldtlmpqdminaKpisaavkeffgssqlsqfmvqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqYldaleefgdefdakmgaeaiqallksmdleqEceqlreelnetnsetKrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynAdfdgdQmavhvpltleaqlearalmmsTnnilspangepiivpsqdvvlgLyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvrIteyEkdanGelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6x2f_AIJ: title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - L2 STATE organism=ESCHERICHIA COLI DNA sequence DG(P1):DC(Q64) DG(P2):DC(Q63) DG(P3):DC(Q62) DT(P4):DA(Q61) DA(P5):DT(Q60) DT(P6):DA(Q59) DT(P7):DA(Q58) DC(P8):DG(Q57) DG(P9):DC(Q56) DC(P10):DG(Q55) DC(P11):DG(Q54) DG(P12):DC(Q53) DC(P13):DG(Q52) DC(P20):DG(Q51) DT(P21):DT(Q50) DC(P22):DA(Q49) DC(P23):DT(Q48) DT(P24):DA(Q41) DA(P25):DT(Q40) DG(P26):DC(Q39) DC(P27):DG(Q38) DC(P28):DG(Q37) DC(P29):DG(Q36) DG(P30):DC(Q35) DC(P31):DG(Q34) DA(P32):DT(Q33) DA(P33):DT(Q32) DG(P34):DC(Q31) DT(P35):DA(Q30) DA(P36):DT(Q29) DT(P37):DA(Q28) DC(P38):DG(Q27) DC(P39):DG(Q26) DT(P40):DA(Q25) DA(P41):DT(Q24) DT(P42):DA(Q23) DT(P43):DA(Q22) DC(P44):DG(Q21) DC(P45):DG(Q20) DT(P46):DA(Q19) DT(P47):DA(Q18) DG(P48):DC(Q17) DC(P49):DG(Q16) DA(P50):DT(Q15) DG(P51):DC(Q14) DC(P52):DG(Q13) DG(P53):DC(Q12) DG(P54):DC(Q11) chainA (682) ARG685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) LYS496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qyrytlpvkageqrllgeltgaacatlvaeiaerhagpvvliapdmqnalrlhdeisqftdqmvmnladwetlpydsfsphqdiissrlstlyqlptmqrgvlivpvntlmqrvcphsflhghalvmkkgqrlsrdalrtqldsagyrhvdqvmehgeyatrgalldlfpmgselpyrldffddeidslrvfdvdsqrtleeveainllpahefptdkaaielfrsqwrdtfevkrdpehiyqqvskgtlpagieywqplffseplpplfsyfpantllvntgdletsaerfqadtlarfenrgvdpmrpllppqslwlrvdelfselknwprvqlktehlptkaananlgfqklpdlavqaqqkapldalrkfletfdgpvvfsvesegrrealgellarikiapqrimrldeasdrgrylmigaaehgfvdtvrnlalicesdllgervarrrqdsrrtinpdtlirnlaelhigqpvvhlehgvgryagmttleaggitgeylmltyandaklyvpvsslhlisryaggaeenaplhklggdawsrarqkaaekvrdvaaelldiyaqraakegfafkhdreqyqlfcdsfpfettpdqaqainavlsdmcqplamdrlvcgdvgfgktevamraaflavdnhkqvavlvpttllaqqhydnfrdrfanwpvriemisRfrsakeqtqilaevaegkidiligthkllqsdvkfkdlgllivdeehrfgvrhkerikamranvdiltltatpiprtlnmamsgmrdlsiiatpparrlavktfvreydsmvvreailreilrggqvyylyndveniqkaaerlaelvpeariaighgqmrerelervmndfhhqrfnvlvcttiietgidiptantiiieradhfglaqlhqlrgrvgrshhqayawlltphpkamttdaqkrleaiasledlgagfalathdleirgagellgeeqsgsmetigfslymellenavdalkagrepsledltsqqtevelrmpsllpddfipdvntrlsfykriasakteneleeikvelidrfgllpdpartlldiarlrqqaqklgirklegnekggviefaeknhvnpawligllqkqpqhyrldgptrlkfiqdlserktriewvrqfmreleenai/vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminaKpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtrERagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnKrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6x2f_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - L2 STATE organism=? DNA sequence DC(Q11):DG(P54) DC(Q12):DG(P53) DG(Q13):DC(P52) DC(Q14):DG(P51) DT(Q15):DA(P50) DG(Q16):DC(P49) DC(Q17):DG(P48) DA(Q18):DT(P47) DA(Q19):DT(P46) DG(Q20):DC(P45) DG(Q21):DC(P44) DA(Q22):DT(P43) DA(Q23):DT(P42) DT(Q24):DA(P41) DA(Q25):DT(P40) DG(Q26):DC(P39) DG(Q27):DC(P38) DA(Q28):DT(P37) DT(Q29):DA(P36) DA(Q30):DT(P35) DC(Q31):DG(P34) DT(Q32):DA(P33) DT(Q33):DA(P32) DG(Q34):DC(P31) DC(Q35):DG(P30) DG(Q36):DC(P29) DG(Q37):DC(P28) DG(Q38):DC(P27) DC(Q39):DG(P26) DT(Q40):DA(P25) DA(Q41):DT(P24) DT(Q48):DC(P23) DA(Q49):DC(P22) DT(Q50):DT(P21) DG(Q51):DC(P20) DG(Q52):DT(P19) DC(Q53):DC(P18) DG(Q54):DC(P17) DG(Q55):DA(P16) DC(Q56):DT(P15) DG(Q57):DG(P14) DA(Q58):DC(P13) DA(Q59):DG(P12) DT(Q60):DC(P11) DA(Q61):DC(P10) DC(Q62):DG(P9) DC(Q63):DC(P8) DC(Q64):DT(P7) chainJ (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnKrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6x2n_A:P-loop_containing_nucleoside_triphosphate_hydrolases;TRCF_domain-like;CarD-like; title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - I STATE organism=? DNA sequence DG(P1):DC(Q64) DG(P2):DC(Q63) DG(P3):DC(Q62) DT(P4):DA(Q61) DA(P5):DT(Q60) DT(P6):DA(Q59) DT(P7):DA(Q58) DC(P8):DG(Q57) DG(P9):DC(Q56) DC(P10):DG(Q55) DC(P11):DG(Q54) DG(P12):DC(Q53) DC(P13):DG(Q52) DC(P20):DG(Q51) DT(P21):DT(Q50) DC(P22):DA(Q49) DC(P23):DT(Q48) DT(P24):DA(Q41) DA(P25):DT(Q40) DG(P26):DC(Q39) DC(P27):DG(Q38) DC(P28):DG(Q37) DC(P29):DG(Q36) DG(P30):DC(Q35) DC(P31):DG(Q34) DA(P32):DT(Q33) DA(P33):DT(Q32) DG(P34):DC(Q31) DT(P35):DA(Q30) DA(P36):DT(Q29) DT(P37):DA(Q28) DC(P38):DG(Q27) DC(P39):DG(Q26) DT(P40):DA(Q25) DA(P41):DT(Q24) DT(P42):DA(Q23) DT(P43):DA(Q22) DC(P44):DG(Q21) DC(P45):DG(Q20) DT(P46):DA(Q19) DT(P47):DA(Q18) DG(P48):DC(Q17) DC(P49):DG(Q16) DA(P50):DT(Q15) DG(P51):DC(Q14) DC(P52):DG(Q13) DG(P53):DC(Q12) DG(P54):DC(Q11) DT(P55):DA(Q10) chainA (682) ARG685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qyrytlpvkageqrllgeltgaacatlvaeiaerhagpvvliapdmqnalrlhdeisqftdqmvmnladwetlpydsfsphqdiissrlstlyqlptmqrgvlivpvntlmqrvcphsflhghalvmkkgqrlsrdalrtqldsagyrhvdqvmehgeyatrgalldlfpmgselpyrldffddeidslrvfdvdsqrtleeveainllpahefptdkaaielfrsqwrdtfevkrdpehiyqqvskgtlpagieywqplffseplpplfsyfpantllvntgdletsaerfqadtlarfenrgvdpmrpllppqslwlrvdelfselknwprvqlktehlptkaananlgfqklpdlavqaqqkapldalrkfletfdgpvvfsvesegrrealgellarikiapqrimrldeasdrgrylmigaaehgfvdtvrnlalicesdllgervarrrqdsrrtinpdtlirnlaelhigqpvvhlehgvgryagmttleaggitgeylmltyandaklyvpvsslhlisryaggaeenaplhklggdawsrarqkaaekvrdvaaelldiyaqraakegfafkhdreqyqlfcdsfpfettpdqaqainavlsdmcqplamdrlvcgdvgfgktevamraaflavdnhkqvavlvpttllaqqhydnfrdrfanwpvriemisRfrsakeqtqilaevaegkidiligthkllqsdvkfkdlgllivdeehrfgvrhkerikamranvdiltltatpiprtlnmamsgmrdlsiiatpparrlavktfvreydsmvvreailreilrggqvyylyndveniqkaaerlaelvpeariaighgqmrerelervmndfhhqrfnvlvcttiietgidiptantiiieradhfglaqlhqlrgrvgrshhqayawlltphpkamttdaqkrleaiasledlgagfalathdleirgagellgeeqsgsmetigfslymellenavdalkagrepsledltsqqtevelrmpsllpddfipdvntrlsfykriasakteneleeikvelidrfgllpdpartlldiarlrqqaqklgirklegnekggviefaeknhvnpawligllqkqpqhyrldgptrlkfiqdlserktriewvrqfmreleenai >6x2n_AIJ: title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - I STATE organism=ESCHERICHIA COLI DNA sequence DG(P1):DC(Q64) DG(P2):DC(Q63) DG(P3):DC(Q62) DT(P4):DA(Q61) DA(P5):DT(Q60) DT(P6):DA(Q59) DT(P7):DA(Q58) DC(P8):DG(Q57) DG(P9):DC(Q56) DC(P10):DG(Q55) DC(P11):DG(Q54) DG(P12):DC(Q53) DC(P13):DG(Q52) DC(P20):DG(Q51) DT(P21):DT(Q50) DC(P22):DA(Q49) DC(P23):DT(Q48) DT(P24):DA(Q41) DA(P25):DT(Q40) DG(P26):DC(Q39) DC(P27):DG(Q38) DC(P28):DG(Q37) DC(P29):DG(Q36) DG(P30):DC(Q35) DC(P31):DG(Q34) DA(P32):DT(Q33) DA(P33):DT(Q32) DG(P34):DC(Q31) DT(P35):DA(Q30) DA(P36):DT(Q29) DT(P37):DA(Q28) DC(P38):DG(Q27) DC(P39):DG(Q26) DT(P40):DA(Q25) DA(P41):DT(Q24) DT(P42):DA(Q23) DT(P43):DA(Q22) DC(P44):DG(Q21) DC(P45):DG(Q20) DT(P46):DA(Q19) DT(P47):DA(Q18) DG(P48):DC(Q17) DC(P49):DG(Q16) DA(P50):DT(Q15) DG(P51):DC(Q14) DC(P52):DG(Q13) DG(P53):DC(Q12) DG(P54):DC(Q11) DT(P55):DA(Q10) chainA (682) ARG685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 31) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qyrytlpvkageqrllgeltgaacatlvaeiaerhagpvvliapdmqnalrlhdeisqftdqmvmnladwetlpydsfsphqdiissrlstlyqlptmqrgvlivpvntlmqrvcphsflhghalvmkkgqrlsrdalrtqldsagyrhvdqvmehgeyatrgalldlfpmgselpyrldffddeidslrvfdvdsqrtleeveainllpahefptdkaaielfrsqwrdtfevkrdpehiyqqvskgtlpagieywqplffseplpplfsyfpantllvntgdletsaerfqadtlarfenrgvdpmrpllppqslwlrvdelfselknwprvqlktehlptkaananlgfqklpdlavqaqqkapldalrkfletfdgpvvfsvesegrrealgellarikiapqrimrldeasdrgrylmigaaehgfvdtvrnlalicesdllgervarrrqdsrrtinpdtlirnlaelhigqpvvhlehgvgryagmttleaggitgeylmltyandaklyvpvsslhlisryaggaeenaplhklggdawsrarqkaaekvrdvaaelldiyaqraakegfafkhdreqyqlfcdsfpfettpdqaqainavlsdmcqplamdrlvcgdvgfgktevamraaflavdnhkqvavlvpttllaqqhydnfrdrfanwpvriemisRfrsakeqtqilaevaegkidiligthkllqsdvkfkdlgllivdeehrfgvrhkerikamranvdiltltatpiprtlnmamsgmrdlsiiatpparrlavktfvreydsmvvreailreilrggqvyylyndveniqkaaerlaelvpeariaighgqmrerelervmndfhhqrfnvlvcttiietgidiptantiiieradhfglaqlhqlrgrvgrshhqayawlltphpkamttdaqkrleaiasledlgagfalathdleirgagellgeeqsgsmetigfslymellenavdalkagrepsledltsqqtevelrmpsllpddfipdvntrlsfykriasakteneleeikvelidrfgllpdpartlldiarlrqqaqklgirklegnekggviefaeknhvnpawligllqkqpqhyrldgptrlkfiqdlserktriewvrqfmreleenai/vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6x43_A:P-loop_containing_nucleoside_triphosphate_hydrolases;TRCF_domain-like;CarD-like; title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - II STATE organism=? DNA sequence DG(P1):DC(Q64) DG(P2):DC(Q63) DG(P3):DC(Q62) DT(P4):DA(Q61) DA(P5):DT(Q60) DT(P6):DA(Q59) DT(P7):DA(Q58) DC(P8):DG(Q57) DG(P9):DC(Q56) DC(P10):DG(Q55) DC(P11):DG(Q54) DG(P12):DC(Q53) DC(P13):DG(Q52) DC(P17):DG(Q51) DC(P18):DT(Q50) DT(P19):DA(Q49) DC(P20):DT(Q48) DT(P21):DA(Q41) DC(P22):DT(Q40) DC(P23):DC(Q39) DT(P24):DG(Q38) DC(P28):DG(Q37) DC(P29):DG(Q36) DG(P30):DC(Q35) DC(P31):DG(Q34) DA(P32):DT(Q33) DA(P33):DT(Q32) DG(P34):DC(Q31) DT(P35):DA(Q30) DA(P36):DT(Q29) DT(P37):DA(Q28) DC(P38):DG(Q27) DC(P39):DG(Q26) DT(P40):DA(Q25) DA(P41):DT(Q24) DT(P42):DA(Q23) DT(P43):DA(Q22) DC(P44):DG(Q21) DC(P45):DG(Q20) DT(P46):DA(Q19) DT(P47):DA(Q18) DG(P48):DC(Q17) DC(P49):DG(Q16) DA(P50):DT(Q15) DG(P51):DC(Q14) DC(P52):DG(Q13) DG(P53):DC(Q12) DG(P54):DC(Q11) DT(P55):DA(Q10) chainA (730) ARG733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (841) GLN844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qyrytlpvkageqrllgeltgaacatlvaeiaerhagpvvliapdmqnalrlhdeisqftdqmvmnladwetlpydsfsphqdiissrlstlyqlptmqrgvlivpvntlmqrvcphsflhghalvmkkgqrlsrdalrtqldsagyrhvdqvmehgeyatrgalldlfpmgselpyrldffddeidslrvfdvdsqrtleeveainllpahefptdkaaielfrsqwrdtfevkrdpehiyqqvskgtlpagieywqplffseplpplfsyfpantllvntgdletsaerfqadtlarfenrgvdpmrpllppqslwlrvdelfselknwprvqlktehlptkaananlgfqklpdlavqaqqkapldalrkfletfdgpvvfsvesegrrealgellarikiapqrimrldeasdrgrylmigaaehgfvdtvrnlalicesdllgervarrrqdsrrtinpdtlirnlaelhigqpvvhlehgvgryagmttleaggitgeylmltyandaklyvpvsslhlisryaggaeenaplhklggdawsrarqkaaekvrdvaaelldiyaqraakegfafkhdreqyqlfcdsfpfettpdqaqainavlsdmcqplamdrlvcgdvgfgktevamraaflavdnhkqvavlvpttllaqqhydnfrdrfanwpvriemisrfrsakeqtqilaevaegkidiligthkllqsdvkfkdlgllivdeehRfgvrhkerikamranvdiltltatpiprtlnmamsgmrdlsiiatpparrlavktfvreydsmvvreailreilrggqvyylyndveniqkaaerlaelvpeariaighgQmrerelervmndfhhqrfnvlvcttiietgidiptantiiieradhfglaqlhqlrgrvgrshhqayawlltphpkamttdaqkrleaiasledlgagfalathdleirgagellgeeqsgsmetigfslymellenavdalkagrepsledltsqqtevelrmpsllpddfipdvntrlsfykriasakteneleeikvelidrfgllpdpartlldiarlrqqaqklgirklegnekggviefaeknhvnpawligllqkqpqhyrldgptrlkfiqdlserktriewvrqfmreleenai >6x43_AIJ: title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - II STATE organism=ESCHERICHIA COLI DNA sequence DG(P1):DC(Q64) DG(P2):DC(Q63) DG(P3):DC(Q62) DT(P4):DA(Q61) DA(P5):DT(Q60) DT(P6):DA(Q59) DT(P7):DA(Q58) DC(P8):DG(Q57) DG(P9):DC(Q56) DC(P10):DG(Q55) DC(P11):DG(Q54) DG(P12):DC(Q53) DC(P13):DG(Q52) DC(P17):DG(Q51) DC(P18):DT(Q50) DT(P19):DA(Q49) DC(P20):DT(Q48) DT(P21):DA(Q41) DC(P22):DT(Q40) DC(P23):DC(Q39) DT(P24):DG(Q38) DC(P28):DG(Q37) DC(P29):DG(Q36) DG(P30):DC(Q35) DC(P31):DG(Q34) DA(P32):DT(Q33) DA(P33):DT(Q32) DG(P34):DC(Q31) DT(P35):DA(Q30) DA(P36):DT(Q29) DT(P37):DA(Q28) DC(P38):DG(Q27) DC(P39):DG(Q26) DT(P40):DA(Q25) DA(P41):DT(Q24) DT(P42):DA(Q23) DT(P43):DA(Q22) DC(P44):DG(Q21) DC(P45):DG(Q20) DT(P46):DA(Q19) DT(P47):DA(Q18) DG(P48):DC(Q17) DC(P49):DG(Q16) DA(P50):DT(Q15) DG(P51):DC(Q14) DC(P52):DG(Q13) DG(P53):DC(Q12) DG(P54):DC(Q11) DT(P55):DA(Q10) chainA (730) ARG733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (841) GLN844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1016) ASP1041 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1019) PRO1044 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qyrytlpvkageqrllgeltgaacatlvaeiaerhagpvvliapdmqnalrlhdeisqftdqmvmnladwetlpydsfsphqdiissrlstlyqlptmqrgvlivpvntlmqrvcphsflhghalvmkkgqrlsrdalrtqldsagyrhvdqvmehgeyatrgalldlfpmgselpyrldffddeidslrvfdvdsqrtleeveainllpahefptdkaaielfrsqwrdtfevkrdpehiyqqvskgtlpagieywqplffseplpplfsyfpantllvntgdletsaerfqadtlarfenrgvdpmrpllppqslwlrvdelfselknwprvqlktehlptkaananlgfqklpdlavqaqqkapldalrkfletfdgpvvfsvesegrrealgellarikiapqrimrldeasdrgrylmigaaehgfvdtvrnlalicesdllgervarrrqdsrrtinpdtlirnlaelhigqpvvhlehgvgryagmttleaggitgeylmltyandaklyvpvsslhlisryaggaeenaplhklggdawsrarqkaaekvrdvaaelldiyaqraakegfafkhdreqyqlfcdsfpfettpdqaqainavlsdmcqplamdrlvcgdvgfgktevamraaflavdnhkqvavlvpttllaqqhydnfrdrfanwpvriemisrfrsakeqtqilaevaegkidiligthkllqsdvkfkdlgllivdeehRfgvrhkerikamranvdiltltatpiprtlnmamsgmrdlsiiatpparrlavktfvreydsmvvreailreilrggqvyylyndveniqkaaerlaelvpeariaighgQmrerelervmndfhhqrfnvlvcttiietgidiptantiiieradhfglaqlhqlrgrvgrshhqayawlltphpkamttdaqkrleaiasledlgagfalathdleirgagellgeeqsgsmetigfslymellenavdalkagrepsledltsqqtevelrmpsllpddfipdvntrlsfykriasakteneleeikvelidrfgllpdpartlldiarlrqqaqklgirklegnekggviefaeknhvnpawligllqkqpqhyrldgptrlkfiqdlserktriewvrqfmreleenai/vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgdDlaPgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNKrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6x4w_AIJ: title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - III STATE organism=ESCHERICHIA COLI DNA sequence DC(P8):DC(Q64) DG(P9):DC(Q63) DC(P10):DC(Q62) DC(P11):DA(Q61) DG(P12):DT(Q60) DC(P13):DA(Q59) DG(P14):DA(Q58) DT(P15):DG(Q57) DA(P16):DC(Q56) DC(P17):DG(Q55) DC(P18):DG(Q54) DT(P19):DC(Q53) DC(P20):DG(Q52) DT(P21):DG(Q51) DC(P22):DT(Q50) DC(P23):DA(Q49) DT(P24):DA(Q41) DA(P25):DT(Q40) DG(P26):DC(Q39) DC(P27):DG(Q38) DC(P28):DG(Q37) DC(P29):DG(Q36) DG(P30):DC(Q35) DC(P31):DG(Q34) DA(P32):DT(Q33) DA(P33):DT(Q32) DG(P34):DC(Q31) DT(P35):DA(Q30) DA(P36):DT(Q29) DT(P37):DA(Q28) DC(P38):DG(Q27) DC(P39):DG(Q26) DT(P40):DA(Q25) DA(P41):DT(Q24) DT(P42):DA(Q23) DT(P43):DA(Q22) DC(P44):DG(Q21) DC(P45):DG(Q20) DT(P46):DA(Q19) DT(P47):DA(Q18) DG(P48):DC(Q17) DC(P49):DG(Q16) DA(P50):DT(Q15) DG(P51):DC(Q14) DC(P52):DG(Q13) DG(P53):DC(Q12) DG(P54):DC(Q11) DT(P55):DA(Q10) chainA chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 24 0 0 0 0 0 0 86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1019) PRO1044 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (319) LYS334 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (780) TYR795 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qyrytlpvkageqrllgeltgaacatlvaeiaerhagpvvliapdmqnalrlhdeisqftdqmvmnladwetlpydsfsphqdiissrlstlyqlptmqrgvlivpvntlmqrvcphsflhghalvmkkgqrlsrdalrtqldsagyrhvdqvmehgeyatrgalldlfpmgselpyrldffddeidslrvfdvdsqrtleeveainllpahefptdkaaielfrsqwrdtfevkrdpehiyqqvskgtlpagieywqplffseplpplfsyfpantllvntgdletsaerfqadtlarfenrgvdpmrpllppqslwlrvdelfselknwprvqlktehlptkaananlgfqklpdlavqaqqkapldalrkfletfdgpvvfsvesegrrealgellarikiapqrimrldeasdrgrylmigaaehgfvdtvrnlalicesdllgervarrrqdsrrtinpdtlirnlaelhigqpvvhlehgvgryagmttleaggitgeylmltyandaklyvpvsslhlisryaggaeenaplhklggdawsrarqkaaekvrdvaaelldiyaqraakegfafkhdreqyqlfcdsfpfettpdqaqainavlsdmcqplamdrlvcgdvgfgktevamraaflavdnhkqvavlvpttllaqqhydnfrdrfanwpvriemisrfrsakeqtqilaevaegkidiligthkllqsdvkfkdlgllivdeehrfgvrhkerikamranvdiltltatpiprtlnmamsgmrdlsiiatpparrlavktfvreydsmvvreailreilrggqvyylyndveniqkaaerlaelvpeariaighgqmrerelervmndfhhqrfnvlvcttiietgidiptantiiieradhfglaqlhqlrgrvgrshhqayawlltphpkamttdaqkrleaiasledlgagfalathdleirgagellgeeqsgsmetigfslymellenavdalkagrepsledltsqqtevelrmpsllpddfipdvntrlsfykriasakteneleeikvelidrfgllpdpartlldiarlrqqaqklgirklegnekggviefaeknhvnpawligllqkqpqhyrldgptrlkfiqdlserktriewvrqfmreleenai/vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlaPgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgKqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgYltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6x4w_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - III STATE organism=? DNA sequence DC(P8):DC(Q64) DG(P9):DC(Q63) DC(P10):DC(Q62) DC(P11):DA(Q61) DG(P12):DT(Q60) DC(P13):DA(Q59) DG(P14):DA(Q58) DT(P15):DG(Q57) DA(P16):DC(Q56) DC(P17):DG(Q55) DC(P18):DG(Q54) DT(P19):DC(Q53) DC(P20):DG(Q52) DT(P21):DG(Q51) DC(P22):DT(Q50) DC(P23):DA(Q49) DT(P24):DA(Q41) DA(P25):DT(Q40) DG(P26):DC(Q39) DC(P27):DG(Q38) DC(P28):DG(Q37) DC(P29):DG(Q36) DG(P30):DC(Q35) DC(P31):DG(Q34) DA(P32):DT(Q33) DA(P33):DT(Q32) DG(P34):DC(Q31) DT(P35):DA(Q30) DA(P36):DT(Q29) DT(P37):DA(Q28) DC(P38):DG(Q27) DC(P39):DG(Q26) DT(P40):DA(Q25) DA(P41):DT(Q24) DT(P42):DA(Q23) DT(P43):DA(Q22) DC(P44):DG(Q21) DC(P45):DG(Q20) DT(P46):DA(Q19) DT(P47):DA(Q18) DG(P48):DC(Q17) DC(P49):DG(Q16) DA(P50):DT(Q15) DG(P51):DC(Q14) DC(P52):DG(Q13) DG(P53):DC(Q12) DG(P54):DC(Q11) DT(P55):DA(Q10) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 24 0 0 0 0 0 0 86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1019) PRO1044 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlaPgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >6x4y_A:P-loop_containing_nucleoside_triphosphate_hydrolases;TRCF_domain-like;CarD-like; title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - IV STATE organism=ESCHERICHIA COLI DNA sequence DA(Q10):DT(P55) DC(Q11):DG(P54) DC(Q12):DG(P53) DG(Q13):DC(P52) DC(Q14):DG(P51) DT(Q15):DA(P50) DG(Q16):DC(P49) DC(Q17):DG(P48) DA(Q18):DT(P47) DA(Q19):DT(P46) DG(Q20):DC(P45) DG(Q21):DC(P44) DA(Q22):DT(P43) DA(Q23):DT(P42) DT(Q24):DA(P41) DA(Q25):DT(P40) DG(Q26):DC(P39) DG(Q27):DC(P38) DA(Q28):DT(P37) DT(Q29):DA(P36) DA(Q30):DT(P35) DC(Q31):DG(P34) DT(Q32):DA(P33) DT(Q33):DA(P32) DG(Q34):DC(P31) DC(Q35):DG(P30) DG(Q36):DC(P29) DG(Q37):DC(P28) DG(Q38):DC(P27) DC(Q39):DG(P26) DT(Q40):DA(P25) DA(Q41):DT(P24) DA(Q49):DC(P23) DT(Q50):DC(P22) DG(Q51):DT(P21) DG(Q52):DC(P20) DC(Q53):DT(P19) DG(Q54):DC(P18) DG(Q55):DC(P17) DC(Q56):DA(P16) DG(Q57):DT(P15) DA(Q58):DG(P14) DA(Q59):DC(P13) DT(Q60):DG(P12) DA(Q61):DC(P11) DC(Q62):DC(P10) DC(Q63):DG(P9) DC(Q64):DC(P8) chainA (892) GLN895 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qyrytlpvkageqrllgeltgaacatlvaeiaerhagpvvliapdmqnalrlhdeisqftdqmvmnladwetlpydsfsphqdiissrlstlyqlptmqrgvlivpvntlmqrvcphsflhghalvmkkgqrlsrdalrtqldsagyrhvdqvmehgeyatrgalldlfpmgselpyrldffddeidslrvfdvdsqrtleeveainllpahefptdkaaielfrsqwrdtfevkrdpehiyqqvskgtlpagieywqplffseplpplfsyfpantllvntgdletsaerfqadtlarfenrgvdpmrpllppqslwlrvdelfselknwprvqlktehlptkaananlgfqklpdlavqaqqkapldalrkfletfdgpvvfsvesegrrealgellarikiapqrimrldeasdrgrylmigaaehgfvdtvrnlalicesdllgervarrrqdsrrtinpdtlirnlaelhigqpvvhlehgvgryagmttleaggitgeylmltyandaklyvpvsslhlisryaggaeenaplhklggdawsrarqkaaekvrdvaaelldiyaqraakegfafkhdreqyqlfcdsfpfettpdqaqainavlsdmcqplamdrlvcgdvgfgktevamraaflavdnhkqvavlvpttllaqqhydnfrdrfanwpvriemisrfrsakeqtqilaevaegkidiligthkllqsdvkfkdlgllivdeehrfgvrhkerikamranvdiltltatpiprtlnmamsgmrdlsiiatpparrlavktfvreydsmvvreailreilrggqvyylyndveniqkaaerlaelvpeariaighgqmrerelervmndfhhqrfnvlvcttiietgidiptantiiieradhfglaQlhqlrgrvgrshhqayawlltphpkamttdaqkrleaiasledlgagfalathdleirgagellgeeqsgsmetigfslymellenavdalkagrepsledltsqqtevelrmpsllpddfipdvntrlsfykriasakteneleeikvelidrfgllpdpartlldiarlrqqaqklgirklegnekggviefaeknhvnpawligllqkqpqhyrldgptrlkfiqdlserktriewvrqfmreleenai >6x4y_AIJ: title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - IV STATE organism=ESCHERICHIA COLI DNA sequence DC(P8):DC(Q64) DG(P9):DC(Q63) DC(P10):DC(Q62) DC(P11):DA(Q61) DG(P12):DT(Q60) DC(P13):DA(Q59) DG(P14):DA(Q58) DT(P15):DG(Q57) DA(P16):DC(Q56) DC(P17):DG(Q55) DC(P18):DG(Q54) DT(P19):DC(Q53) DC(P20):DG(Q52) DT(P21):DG(Q51) DC(P22):DT(Q50) DC(P23):DA(Q49) DT(P24):DA(Q41) DA(P25):DT(Q40) DG(P26):DC(Q39) DC(P27):DG(Q38) DC(P28):DG(Q37) DC(P29):DG(Q36) DG(P30):DC(Q35) DC(P31):DG(Q34) DA(P32):DT(Q33) DA(P33):DT(Q32) DG(P34):DC(Q31) DT(P35):DA(Q30) DA(P36):DT(Q29) DT(P37):DA(Q28) DC(P38):DG(Q27) DC(P39):DG(Q26) DT(P40):DA(Q25) DA(P41):DT(Q24) DT(P42):DA(Q23) DT(P43):DA(Q22) DC(P44):DG(Q21) DC(P45):DG(Q20) DT(P46):DA(Q19) DT(P47):DA(Q18) DG(P48):DC(Q17) DC(P49):DG(Q16) DA(P50):DT(Q15) DG(P51):DC(Q14) DC(P52):DG(Q13) DG(P53):DC(Q12) DG(P54):DC(Q11) DT(P55):DA(Q10) chainA (892) GLN895 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (337) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qyrytlpvkageqrllgeltgaacatlvaeiaerhagpvvliapdmqnalrlhdeisqftdqmvmnladwetlpydsfsphqdiissrlstlyqlptmqrgvlivpvntlmqrvcphsflhghalvmkkgqrlsrdalrtqldsagyrhvdqvmehgeyatrgalldlfpmgselpyrldffddeidslrvfdvdsqrtleeveainllpahefptdkaaielfrsqwrdtfevkrdpehiyqqvskgtlpagieywqplffseplpplfsyfpantllvntgdletsaerfqadtlarfenrgvdpmrpllppqslwlrvdelfselknwprvqlktehlptkaananlgfqklpdlavqaqqkapldalrkfletfdgpvvfsvesegrrealgellarikiapqrimrldeasdrgrylmigaaehgfvdtvrnlalicesdllgervarrrqdsrrtinpdtlirnlaelhigqpvvhlehgvgryagmttleaggitgeylmltyandaklyvpvsslhlisryaggaeenaplhklggdawsrarqkaaekvrdvaaelldiyaqraakegfafkhdreqyqlfcdsfpfettpdqaqainavlsdmcqplamdrlvcgdvgfgktevamraaflavdnhkqvavlvpttllaqqhydnfrdrfanwpvriemisrfrsakeqtqilaevaegkidiligthkllqsdvkfkdlgllivdeehrfgvrhkerikamranvdiltltatpiprtlnmamsgmrdlsiiatpparrlavktfvreydsmvvreailreilrggqvyylyndveniqkaaerlaelvpeariaighgqmrerelervmndfhhqrfnvlvcttiietgidiptantiiieradhfglaQlhqlrgrvgrshhqayawlltphpkamttdaqkrleaiasledlgagfalathdleirgagellgeeqsgsmetigfslymellenavdalkagrepsledltsqqtevelrmpsllpddfipdvntrlsfykriasakteneleeikvelidrfgllpdpartlldiarlrqqaqklgirklegnekggviefaeknhvnpawligllqkqpqhyrldgptrlkfiqdlserktriewvrqfmreleenai/vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6x50_AIJ: title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - V STATE organism=ESCHERICHIA COLI DNA sequence DA(Q10):DT(P55) DC(Q11):DG(P54) DC(Q12):DG(P53) DG(Q13):DC(P52) DC(Q14):DG(P51) DT(Q15):DA(P50) DG(Q16):DC(P49) DC(Q17):DG(P48) DA(Q18):DT(P47) DA(Q19):DT(P46) DG(Q20):DC(P45) DG(Q21):DC(P44) DA(Q22):DT(P43) DA(Q23):DT(P42) DT(Q24):DA(P41) DA(Q25):DT(P40) DG(Q26):DC(P39) DG(Q27):DC(P38) DA(Q28):DT(P37) DT(Q29):DA(P36) DA(Q30):DT(P35) DC(Q31):DG(P34) DT(Q32):DA(P33) DT(Q33):DA(P32) DG(Q34):DC(P31) DC(Q35):DG(P30) DG(Q36):DC(P29) DG(Q37):DC(P28) DG(Q38):DC(P27) DC(Q39):DG(P26) DT(Q40):DA(P25) DA(Q41):DT(P24) DG(Q42):DC(P23) DA(Q49):DC(P22) DT(Q50):DT(P21) DG(Q51):DC(P20) DG(Q52):DT(P19) DC(Q53):DC(P18) DG(Q54):DC(P17) DG(Q55):DA(P16) DC(Q56):DT(P15) DG(Q57):DG(P14) DA(Q58):DC(P13) DA(Q59):DG(P12) DT(Q60):DC(P11) DA(Q61):DC(P10) DC(Q62):DG(P9) DC(Q63):DC(P8) DC(Q64):DT(P7) chainA (681) ARG685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (729) ARG733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (840) GLN844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (891) GLN895 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 3 0 0 0 0 0 0 chainJ ( 31) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence yrytlpvkageqrllgeltgaacatlvaeiaerhagpvvliapdmqnalrlhdeisqftdqmvmnladwetlpydsfsphqdiissrlstlyqlptmqrgvlivpvntlmqrvcphsflhghalvmkkgqrlsrdalrtqldsagyrhvdqvmehgeyatrgalldlfpmgselpyrldffddeidslrvfdvdsqrtleeveainllpahefptdkaaielfrsqwrdtfevkrdpehiyqqvskgtlpagieywqplffseplpplfsyfpantllvntgdletsaerfqadtlarfenrgvdpmrpllppqslwlrvdelfselknwprvqlktehlptkaananlgfqklpdlavqaqqkapldalrkfletfdgpvvfsvesegrrealgellarikiapqrimrldeasdrgrylmigaaehgfvdtvrnlalicesdllgervarrrqdsrrtinpdtlirnlaelhigqpvvhlehgvgryagmttleaggitgeylmltyandaklyvpvsslhlisryaggaeenaplhklggdawsrarqkaaekvrdvaaelldiyaqraakegfafkhdreqyqlfcdsfpfettpdqaqainavlsdmcqplamdrlvcgdvgfgktevamraaflavdnhkqvavlvpttllaqqhydnfrdrfanwpvriemisRfrsakeqtqilaevaegkidiligthkllqsdvkfkdlgllivdeehRfgvrhkerikamranvdiltltatpiprtlnmamsgmrdlsiiatpparrlavktfvreydsmvvreailreilrggqvyylyndveniqkaaerlaelvpeariaighgQmrerelervmndfhhqrfnvlvcttiietgidiptantiiieradhfglaQlhqlrgrvgrshhqayawlltphpkamttdaqkrleaiasledlgagfalathdleirgagellgeeqsgsmetigfslymellenavdalkagrepsledltsqqtevelrmpsllpddfipdvntrlsfykriasakteneleeikvelidrfgllpdpartlldiarlrqqaqklgirklegnekggviefaeknhvnpawligllqkqpqhyrldgptrlkfiqdlserktriewvrqfmreleenai/vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6x50_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MFD-BOUND E.COLI RNA POLYMERASE ELONGATION COMPLEX - V STATE organism=? DNA sequence DA(Q10):DT(P55) DC(Q11):DG(P54) DC(Q12):DG(P53) DG(Q13):DC(P52) DC(Q14):DG(P51) DT(Q15):DA(P50) DG(Q16):DC(P49) DC(Q17):DG(P48) DA(Q18):DT(P47) DA(Q19):DT(P46) DG(Q20):DC(P45) DG(Q21):DC(P44) DA(Q22):DT(P43) DA(Q23):DT(P42) DT(Q24):DA(P41) DA(Q25):DT(P40) DG(Q26):DC(P39) DG(Q27):DC(P38) DA(Q28):DT(P37) DT(Q29):DA(P36) DA(Q30):DT(P35) DC(Q31):DG(P34) DT(Q32):DA(P33) DT(Q33):DA(P32) DG(Q34):DC(P31) DC(Q35):DG(P30) DG(Q36):DC(P29) DG(Q37):DC(P28) DG(Q38):DC(P27) DC(Q39):DG(P26) DT(Q40):DA(P25) DA(Q41):DT(P24) DG(Q42):DC(P23) DA(Q49):DC(P22) DT(Q50):DT(P21) DG(Q51):DC(P20) DG(Q52):DT(P19) DC(Q53):DC(P18) DG(Q54):DC(P17) DG(Q55):DA(P16) DC(Q56):DT(P15) DG(Q57):DG(P14) DA(Q58):DC(P13) DA(Q59):DG(P12) DT(Q60):DC(P11) DA(Q61):DC(P10) DC(Q62):DG(P9) DC(Q63):DC(P8) DC(Q64):DT(P7) chainJ ( 31) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6x59_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE MOUSE CGAS CATALYTIC DOMAIN BINDING TO HUMAN ASSEMBLED NUCLEOSOME organism=HOMO SAPIENS DNA sequence DT(I1):DA(J145) DG(I2):DC(J144) DG(I3):DC(J143) DA(I4):DT(J142) DG(I5):DC(J141) DA(I6):DT(J140) DA(I7):DT(J139) DT(I8):DA(J138) DC(I9):DG(J137) DC(I10):DG(J136) DC(I11):DG(J135) DG(I12):DC(J134) DG(I13):DC(J133) DT(I14):DA(J132) DG(I15):DC(J131) DC(I16):DG(J130) DC(I17):DG(J129) DG(I18):DC(J128) DA(I19):DT(J127) DG(I20):DC(J126) DG(I21):DC(J125) DC(I22):DG(J124) DC(I23):DG(J123) DG(I24):DC(J122) DC(I25):DG(J121) DT(I26):DA(J120) DC(I27):DG(J119) DA(I28):DT(J118) DA(I29):DT(J117) DT(I30):DA(J116) DT(I31):DA(J115) DG(I32):DC(J114) DG(I33):DC(J113) DT(I34):DA(J112) DC(I35):DG(J111) DG(I36):DC(J110) DT(I37):DA(J109) DA(I38):DT(J108) DG(I39):DC(J107) DA(I40):DT(J106) DC(I41):DG(J105) DA(I42):DT(J104) DG(I43):DC(J103) DC(I44):DG(J102) DT(I45):DA(J101) DC(I46):DG(J100) DT(I47):DA(J99) DA(I48):DT(J98) DG(I49):DC(J97) DC(I50):DG(J96) DA(I51):DT(J95) DC(I52):DG(J94) DC(I53):DG(J93) DG(I54):DC(J92) DC(I55):DG(J91) DT(I56):DA(J90) DT(I57):DA(J89) DA(I58):DT(J88) DA(I59):DT(J87) DA(I60):DT(J86) DC(I61):DG(J85) DG(I62):DC(J84) DC(I63):DG(J83) DA(I64):DT(J82) DC(I65):DG(J81) DG(I66):DC(J80) DT(I67):DA(J79) DA(I68):DT(J78) DC(I69):DG(J77) DG(I70):DC(J76) DC(I71):DG(J75) DG(I72):DC(J74) DC(I73):DG(J73) DT(I74):DA(J72) DG(I75):DC(J71) DT(I76):DA(J70) DC(I77):DG(J69) DC(I78):DG(J68) DC(I79):DG(J67) DC(I80):DG(J66) DC(I81):DG(J65) DG(I82):DC(J64) DC(I83):DG(J63) DG(I84):DC(J62) DT(I85):DA(J61) DT(I86):DA(J60) DT(I87):DA(J59) DT(I88):DA(J58) DA(I89):DT(J57) DA(I90):DT(J56) DC(I91):DG(J55) DC(I92):DG(J54) DG(I93):DC(J53) DC(I94):DG(J52) DC(I95):DG(J51) DA(I96):DT(J50) DA(I97):DT(J49) DG(I98):DC(J48) DG(I99):DC(J47) DG(I100):DC(J46) DG(I101):DC(J45) DA(I102):DT(J44) DT(I103):DA(J43) DT(I104):DA(J42) DA(I105):DT(J41) DC(I106):DG(J40) DT(I107):DA(J39) DC(I108):DG(J38) DC(I109):DG(J37) DC(I110):DG(J36) DT(I111):DA(J35) DA(I112):DT(J34) DG(I113):DC(J33) DT(I114):DA(J32) DC(I115):DG(J31) DT(I116):DA(J30) DC(I117):DG(J29) DC(I118):DG(J28) DA(I119):DT(J27) DG(I120):DC(J26) DG(I121):DC(J25) DC(I122):DG(J24) DA(I123):DT(J23) DC(I124):DG(J22) DG(I125):DC(J21) DT(I126):DA(J20) DG(I127):DC(J19) DT(I128):DA(J18) DC(I129):DG(J17) DA(I130):DT(J16) DG(I131):DC(J15) DA(I132):DT(J14) DT(I133):DA(J13) DA(I134):DT(J12) DT(I135):DA(J11) DA(I136):DT(J10) DT(I137):DA(J9) DA(I138):DT(J8) DC(I139):DG(J7) DA(I140):DT(J6) DT(I141):DA(J5) DC(I142):DG(J4) DC(I143):DG(J3) DT(I144):DA(J2) DG(I145):DC(J1) chainA ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence kpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/rdNIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/krsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/kpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/lrDNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavll/rSrkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >6x5a_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE MOUSE CGAS CATALYTIC DOMAIN BINDING TO HUMAN NUCLEOSOME THAT PURIFIED FROM HEK293T CELLS organism=HOMO SAPIENS DNA sequence DT(I1):DA(J145) DG(I2):DC(J144) DG(I3):DC(J143) DA(I4):DT(J142) DG(I5):DC(J141) DA(I6):DT(J140) DA(I7):DT(J139) DT(I8):DA(J138) DC(I9):DG(J137) DC(I10):DG(J136) DC(I11):DG(J135) DG(I12):DC(J134) DG(I13):DC(J133) DT(I14):DA(J132) DG(I15):DC(J131) DC(I16):DG(J130) DC(I17):DG(J129) DG(I18):DC(J128) DA(I19):DT(J127) DG(I20):DC(J126) DG(I21):DC(J125) DC(I22):DG(J124) DC(I23):DG(J123) DG(I24):DC(J122) DC(I25):DG(J121) DT(I26):DA(J120) DC(I27):DG(J119) DA(I28):DT(J118) DA(I29):DT(J117) DT(I30):DA(J116) DT(I31):DA(J115) DG(I32):DC(J114) DG(I33):DC(J113) DT(I34):DA(J112) DC(I35):DG(J111) DG(I36):DC(J110) DT(I37):DA(J109) DA(I38):DT(J108) DG(I39):DC(J107) DA(I40):DT(J106) DC(I41):DG(J105) DA(I42):DT(J104) DG(I43):DC(J103) DC(I44):DG(J102) DT(I45):DA(J101) DC(I46):DG(J100) DT(I47):DA(J99) DA(I48):DT(J98) DG(I49):DC(J97) DC(I50):DG(J96) DA(I51):DT(J95) DC(I52):DG(J94) DC(I53):DG(J93) DG(I54):DC(J92) DC(I55):DG(J91) DT(I56):DA(J90) DT(I57):DA(J89) DA(I58):DT(J88) DA(I59):DT(J87) DA(I60):DT(J86) DC(I61):DG(J85) DG(I62):DC(J84) DC(I63):DG(J83) DA(I64):DT(J82) DC(I65):DG(J81) DG(I66):DC(J80) DT(I67):DA(J79) DA(I68):DT(J78) DC(I69):DG(J77) DG(I70):DC(J76) DC(I71):DG(J75) DG(I72):DC(J74) DC(I73):DG(J73) DT(I74):DA(J72) DG(I75):DC(J71) DT(I76):DA(J70) DC(I77):DG(J69) DC(I78):DG(J68) DC(I79):DG(J67) DC(I80):DG(J66) DC(I81):DG(J65) DG(I82):DC(J64) DC(I83):DG(J63) DG(I84):DC(J62) DT(I85):DA(J61) DT(I86):DA(J60) DT(I87):DA(J59) DT(I88):DA(J58) DA(I89):DT(J57) DA(I90):DT(J56) DC(I91):DG(J55) DC(I92):DG(J54) DG(I93):DC(J53) DC(I94):DG(J52) DC(I95):DG(J51) DA(I96):DT(J50) DA(I97):DT(J49) DG(I98):DC(J48) DG(I99):DC(J47) DG(I100):DC(J46) DG(I101):DC(J45) DA(I102):DT(J44) DT(I103):DA(J43) DT(I104):DA(J42) DA(I105):DT(J41) DC(I106):DG(J40) DT(I107):DA(J39) DC(I108):DG(J38) DC(I109):DG(J37) DC(I110):DG(J36) DT(I111):DA(J35) DA(I112):DT(J34) DG(I113):DC(J33) DT(I114):DA(J32) DC(I115):DG(J31) DT(I116):DA(J30) DC(I117):DG(J29) DC(I118):DG(J28) DA(I119):DT(J27) DG(I120):DC(J26) DG(I121):DC(J25) DC(I122):DG(J24) DA(I123):DT(J23) DC(I124):DG(J22) DG(I125):DC(J21) DT(I126):DA(J20) DG(I127):DC(J19) DT(I128):DA(J18) DC(I129):DG(J17) DA(I130):DT(J16) DG(I131):DC(J15) DA(I132):DT(J14) DT(I133):DA(J13) DA(I134):DT(J12) DT(I135):DA(J11) DA(I136):DT(J10) DT(I137):DA(J9) DA(I138):DT(J8) DC(I139):DG(J7) DA(I140):DT(J6) DT(I141):DA(J5) DC(I142):DG(J4) DC(I143):DG(J3) DT(I144):DA(J2) DG(I145):DC(J1) chainA ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/rdNIqgitkpairrlarrggvkrisgliYeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/krsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/kpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/arakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgkvtiaqggvlpniqavll/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >6x5a_G:Histone-fold; title=THE MOUSE CGAS CATALYTIC DOMAIN BINDING TO HUMAN NUCLEOSOME THAT PURIFIED FROM HEK293T CELLS organism=HOMO SAPIENS DNA sequence DT(I1):DA(J145) DG(I2):DC(J144) DG(I3):DC(J143) DA(I4):DT(J142) DG(I5):DC(J141) DA(I6):DT(J140) DA(I7):DT(J139) DT(I8):DA(J138) DC(I9):DG(J137) DC(I10):DG(J136) DC(I11):DG(J135) DG(I12):DC(J134) DG(I13):DC(J133) DT(I14):DA(J132) DG(I15):DC(J131) DC(I16):DG(J130) DC(I17):DG(J129) DG(I18):DC(J128) DA(I19):DT(J127) DG(I20):DC(J126) DG(I21):DC(J125) DC(I22):DG(J124) DC(I23):DG(J123) DG(I24):DC(J122) DC(I25):DG(J121) DT(I26):DA(J120) DC(I27):DG(J119) DA(I28):DT(J118) DA(I29):DT(J117) DT(I30):DA(J116) DT(I31):DA(J115) DG(I32):DC(J114) DG(I33):DC(J113) DT(I34):DA(J112) DC(I35):DG(J111) DG(I36):DC(J110) DT(I37):DA(J109) DA(I38):DT(J108) DG(I39):DC(J107) DA(I40):DT(J106) DC(I41):DG(J105) DA(I42):DT(J104) DG(I43):DC(J103) DC(I44):DG(J102) DT(I45):DA(J101) DC(I46):DG(J100) DT(I47):DA(J99) DA(I48):DT(J98) DG(I49):DC(J97) DC(I50):DG(J96) DA(I51):DT(J95) DC(I52):DG(J94) DC(I53):DG(J93) DG(I54):DC(J92) DC(I55):DG(J91) DT(I56):DA(J90) DT(I57):DA(J89) DA(I58):DT(J88) DA(I59):DT(J87) DA(I60):DT(J86) DC(I61):DG(J85) DG(I62):DC(J84) DC(I63):DG(J83) DA(I64):DT(J82) DC(I65):DG(J81) DG(I66):DC(J80) DT(I67):DA(J79) DA(I68):DT(J78) DC(I69):DG(J77) DG(I70):DC(J76) DC(I71):DG(J75) DG(I72):DC(J74) DC(I73):DG(J73) DT(I74):DA(J72) DG(I75):DC(J71) DT(I76):DA(J70) DC(I77):DG(J69) DC(I78):DG(J68) DC(I79):DG(J67) DC(I80):DG(J66) DC(I81):DG(J65) DG(I82):DC(J64) DC(I83):DG(J63) DG(I84):DC(J62) DT(I85):DA(J61) DT(I86):DA(J60) DT(I87):DA(J59) DT(I88):DA(J58) DA(I89):DT(J57) DA(I90):DT(J56) DC(I91):DG(J55) DC(I92):DG(J54) DG(I93):DC(J53) DC(I94):DG(J52) DC(I95):DG(J51) DA(I96):DT(J50) DA(I97):DT(J49) DG(I98):DC(J48) DG(I99):DC(J47) DG(I100):DC(J46) DG(I101):DC(J45) DA(I102):DT(J44) DT(I103):DA(J43) DT(I104):DA(J42) DA(I105):DT(J41) DC(I106):DG(J40) DT(I107):DA(J39) DC(I108):DG(J38) DC(I109):DG(J37) DC(I110):DG(J36) DT(I111):DA(J35) DA(I112):DT(J34) DG(I113):DC(J33) DT(I114):DA(J32) DC(I115):DG(J31) DT(I116):DA(J30) DC(I117):DG(J29) DC(I118):DG(J28) DA(I119):DT(J27) DG(I120):DC(J26) DG(I121):DC(J25) DC(I122):DG(J24) DA(I123):DT(J23) DC(I124):DG(J22) DG(I125):DC(J21) DT(I126):DA(J20) DG(I127):DC(J19) DT(I128):DA(J18) DC(I129):DG(J17) DA(I130):DT(J16) DG(I131):DC(J15) DA(I132):DT(J14) DT(I133):DA(J13) DA(I134):DT(J12) DT(I135):DA(J11) DA(I136):DT(J10) DT(I137):DA(J9) DA(I138):DT(J8) DC(I139):DG(J7) DA(I140):DT(J6) DT(I141):DA(J5) DC(I142):DG(J4) DC(I143):DG(J3) DT(I144):DA(J2) DG(I145):DC(J1) chainG ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence arakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgkvtiaqggvlpniqavll >6x6d_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN IN COMPLEX WITH UNMODIFIED PRECURSOR FOR A MODERN RECOGNITION ELEMENT (PRE-GBS) organism=Homo sapiens DNA sequence DC(D2):DG(C18) DA(D3):DT(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DC(D7):DG(C13) DG(D8):DC(C12) DC(D9):DG(C11) DT(D10):DA(C10) DC(D11):DG(C9) DC(D12):DG(C8) DG(D13):DC(C7) DT(D14):DA(C6) DT(D15):DA(C5) DC(D16):DG(C4) DT(D17):DA(C3) DG(D18):DC(C2) chainA ( 26) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 ( 27) VAL443 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 31) ARG447 0 0 0 0 0 0 0 0 0 0 12 14 1 0 0 0 0 chainB ( 25) LYS442 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG447 0 0 0 0 2 9 10 0 0 0 0 0 0 0 0 0 0 prot.sequence ppklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea/pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >6x6d_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN IN COMPLEX WITH UNMODIFIED PRECURSOR FOR A MODERN RECOGNITION ELEMENT (PRE-GBS) organism=Homo sapiens DNA sequence DC(C2):DG(D18) DA(C3):DT(D17) DG(C4):DC(D16) DA(C5):DT(D15) DA(C6):DT(D14) DC(C7):DG(D13) DG(C8):DC(D12) DG(C9):DC(D11) DA(C10):DT(D10) DG(C11):DC(D9) DC(C12):DG(D8) DG(C13):DC(D7) DT(C14):DA(D6) DT(C15):DA(D5) DC(C16):DG(D4) DT(C17):DA(D3) DG(C18):DC(D2) chainB ( 25) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 ( 26) VAL443 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 30) ARG447 0 0 0 0 0 0 0 0 0 0 10 9 2 0 0 0 0 prot.sequence pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea >6x6e_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN IN COMPLEX WITH METHYLATED PRECURSOR FOR A MODERN RECOGNITION ELEMENT (METHYLATED PRE-GBS) organism=Homo sapiens DNA sequence DC(C2):DG(D36) DA(C3):DT(D35) DG(C4):DC(D34) DA(C5):DT(D33) DA(C6):DT(D32) DC(C7):DG(D31) DG(C8):5CM(D30) DG(C9):DC(D29) DA(C10):DT(D28) DG(C11):DC(D27) 5CM(C12):DG(D26) DG(C13):DC(D25) DT(C14):DA(D24) DT(C15):DA(D23) DC(C16):DG(D22) DT(C17):DA(D21) DG(C18):DC(D20) chainA ( 24) LYS442 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL443 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG447 0 0 0 0 3 12 13 0 0 0 0 0 0 0 0 0 0 chainB ( 24) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 2 0 ( 25) VAL443 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 29) ARG447 0 0 0 0 0 0 0 0 0 0 16 12 3 0 0 0 0 prot.sequence klclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear/klclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnle >6x6e_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=GLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN IN COMPLEX WITH METHYLATED PRECURSOR FOR A MODERN RECOGNITION ELEMENT (METHYLATED PRE-GBS) organism=Homo sapiens DNA sequence DC(D20):DG(C18) DA(D21):DT(C17) DG(D22):DC(C16) DA(D23):DT(C15) DA(D24):DT(C14) DC(D25):DG(C13) DG(D26):5CM(C12) DC(D27):DG(C11) DT(D28):DA(C10) DC(D29):DG(C9) 5CM(D30):DG(C8) DG(D31):DC(C7) DT(D32):DA(C6) DT(D33):DA(C5) DC(D34):DG(C4) DT(D35):DA(C3) DG(D36):DC(C2) chainB ( 24) LYS442 0 2 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) VAL443 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG447 0 0 0 0 3 12 16 0 0 0 0 0 0 0 0 0 0 prot.sequence klclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnle >6x6t_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI COUPLED TRANSCRIPTION- TRANSLATION COMPLEX B1 (TTC-B1) CONTAINING AN MRNA WITH A 24 NT LONG SPACER, TRANSCRIPTION FACTORS NUSA AND NUSG, AND FMET-TRNAS AT P- SITE AND E-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 10 29 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqveka/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6x6t_E:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Ribosomal_protein_S20; title=CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI COUPLED TRANSCRIPTION- TRANSLATION COMPLEX B1 (TTC-B1) CONTAINING AN MRNA WITH A 24 NT LONG SPACER, TRANSCRIPTION FACTORS NUSA AND NUSG, AND FMET-TRNAS AT P- SITE AND E-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6x6z_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REV1 TERNARY COMPLEX WITH DCTP AND CA2+ organism=Saccharomyces cerevisiae DNA sequence DC(T6):DG(P12) DT(T7):DA(P11) DA(T8):DT(P10) DC(T9):DG(P9) DC(T10):DG(P8) DA(T11):DT(P7) DC(T12):DG(P6) DA(T13):DT(P5) DC(T14):DG(P4) DC(T15):DG(P3) DC(T16):DG(P2) DC(T17):DG(P1) chainA ( 19) LEU325 10 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU328 2 0 0 0 0 0 0 0 0 0 0 0 ( 23) SER329 4 0 0 0 0 0 0 0 0 0 0 0 (320) ASP626 0 12 0 0 0 0 0 0 0 0 0 0 prot.sequence ivacddpdfltsyfahsrLhhLSawKanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfsrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdvgpdnnq >6x70_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REV1-DNA BINARY COMPLEX organism=Saccharomyces cerevisiae DNA sequence DG(P1):DC(T17) DG(P2):DC(T16) DG(P3):DC(T15) DG(P4):DC(T14) DT(P5):DA(T13) DG(P6):DC(T12) DT(P7):DA(T11) DG(P8):DC(T10) DG(P9):DC(T9) DT(P10):DA(T8) DA(P11):DT(T7) DG(P12):DC(T6) chainA ( 19) LEU325 0 0 0 0 0 0 0 0 0 0 0 8 ( 23) SER329 0 0 0 0 0 0 0 0 0 0 0 4 ( 26) LYS332 0 0 0 0 0 0 0 0 0 0 0 1 (320) ASP626 0 0 0 0 0 0 0 0 0 0 10 0 (386) SER692 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence ivacddpdfltsyfahsrLhhlSawKanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdvgpdnn >6x71_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REV1 MG2+-FACILITATED INTERMEDIATE COMPLEX WITH REACTANT DCTP AND PRODUCT DCMP organism=Saccharomyces cerevisiae DNA sequence DG(P1):DC(T17) DG(P2):DC(T16) DG(P3):DC(T15) DG(P4):DC(T14) DT(P5):DA(T13) DG(P6):DC(T12) DT(P7):DA(T11) DG(P8):DC(T10) DG(P9):DC(T9) DT(P10):DA(T8) DA(P11):DT(T7) DG(P12):DC(T6) chainA ( 19) LEU325 0 0 0 0 0 0 0 0 0 0 0 14 ( 22) LEU328 0 0 0 0 0 0 0 0 0 0 0 2 ( 23) SER329 0 0 0 0 0 0 0 0 0 0 1 4 (320) ASP626 0 0 0 0 0 0 0 0 0 0 11 0 (361) LYS667 0 0 0 0 0 0 2 0 0 0 0 0 (386) SER692 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence ivacddpdfltsyfahsrLhhLSawKanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlKlmrrckdapieppkymgmgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdvgpdnnq >6x72_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REV1 MG2+-FACILITATED PRODUCT COMPLEX WITH TWO MONOPHOSPHATES organism=Saccharomyces cerevisiae DNA sequence DC(T6):DG(P12) DT(T7):DA(P11) DA(T8):DT(P10) DC(T9):DG(P9) DC(T10):DG(P8) DA(T11):DT(P7) DC(T12):DG(P6) DA(T13):DT(P5) DC(T14):DG(P4) DC(T15):DG(P3) DC(T16):DG(P2) DC(T17):DG(P1) chainA ( 19) LEU325 22 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU328 3 0 0 0 0 0 0 0 0 0 0 0 ( 23) SER329 4 3 0 0 0 0 0 0 0 0 0 0 ( 26) LYS332 3 0 0 0 0 0 0 0 0 0 0 0 (320) ASP626 0 10 0 0 0 0 0 0 0 0 0 0 (386) SER692 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence ivacddpdfltsyfahsrLhhLSawKanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdvgpdnnq >6x73_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REV1 MG2+-FACILITATED PRODUCT COMPLEX WITH ONE MONOPHOSPHATE organism=Saccharomyces cerevisiae DNA sequence DC(T6):DG(P12) DT(T7):DA(P11) DA(T8):DT(P10) DC(T9):DG(P9) DC(T10):DG(P8) DA(T11):DT(P7) DC(T12):DG(P6) DA(T13):DT(P5) DC(T14):DG(P4) DC(T15):DG(P3) DC(T16):DG(P2) DC(T17):DG(P1) chainA ( 19) LEU325 15 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU328 5 0 0 0 0 0 0 0 0 0 0 0 ( 23) SER329 7 3 0 0 0 0 0 0 0 0 0 0 (320) ASP626 0 9 0 0 0 0 0 0 0 0 0 0 (386) SER692 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence ivacddpdfltsyfahsrLhhLSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdvgpdnnql >6x74_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REV1 MG2+-FACILITATED PRODUCT COMPLEX WITH NO MONOPHOSPHATES organism=Saccharomyces cerevisiae DNA sequence DG(P1):DC(T17) DG(P2):DC(T16) DG(P3):DC(T15) DG(P4):DC(T14) DT(P5):DA(T13) DG(P6):DC(T12) DT(P7):DA(T11) DG(P8):DC(T10) DG(P9):DC(T9) DT(P10):DA(T8) DA(P11):DT(T7) DG(P12):DC(T6) chainA ( 19) LEU325 0 0 0 0 0 0 0 0 0 0 0 21 ( 22) LEU328 0 0 0 0 0 0 0 0 0 0 0 6 ( 23) SER329 0 0 0 0 0 0 0 0 0 0 3 6 (320) ASP626 0 0 0 0 0 0 0 0 0 0 9 0 (386) SER692 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence ivacddpdfltsyfahsrLhhLSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdvgpdnnql >6x75_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REV1 MN2+-FACILITATED PRODUCT COMPLEX WITH SECOND DCTP BOUND organism=Saccharomyces cerevisiae DNA sequence DG(P1):DC(T17) DG(P2):DC(T16) DG(P3):DC(T15) DG(P4):DC(T14) DT(P5):DA(T13) DG(P6):DC(T12) DT(P7):DA(T11) DG(P8):DC(T10) DG(P9):DC(T9) DT(P10):DA(T8) DA(P11):DT(T7) DG(P12):DC(T6) DC(P13):DG(T5) chainA ( 19) LEU325 0 0 0 0 0 0 0 0 0 0 0 8 0 ( 23) SER329 0 0 0 0 0 0 0 0 0 0 3 6 0 (111) TRP417 0 0 0 0 0 0 0 0 0 0 0 0 5 (320) ASP626 0 0 0 0 0 0 0 0 0 0 7 0 0 (323) TRP629 0 0 0 0 0 0 0 0 0 0 0 0 3 (361) LYS667 0 0 0 0 0 0 1 0 0 0 0 0 0 (375) LYS681 0 0 0 0 0 0 0 0 0 0 0 0 14 (379) MET685 0 0 0 0 0 0 0 0 0 0 0 0 6 (386) SER692 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence ivacddpdfltsyfahsrLhhlSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmWvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinWgirfknitqvdlfiergcqylleklneinkttsqitlKlmrrckdapieppKymgMgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdvgpdnnq >6x76_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REV1 L325G MN2+-FACILITATED PRODUCT COMPLEX WITH SECOND DCTP BOUND organism=Saccharomyces cerevisiae DNA sequence DG(P1):DC(T17) DG(P2):DC(T16) DG(P3):DC(T15) DG(P4):DC(T14) DT(P5):DA(T13) DG(P6):DC(T12) DT(P7):DA(T11) DG(P8):DC(T10) DG(P9):DC(T9) DT(P10):DA(T8) DA(P11):DT(T7) DG(P12):DC(T6) DC(P13):DG(T5) chainA ( 18) ARG324 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 22) LEU328 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 23) SER329 0 0 0 0 0 0 0 0 0 0 1 4 0 ( 26) LYS332 0 0 0 0 0 0 0 0 0 0 0 8 0 (111) TRP417 0 0 0 0 0 0 0 0 0 0 0 0 4 (320) ASP626 0 0 0 0 0 0 0 0 0 0 6 0 0 (323) TRP629 0 0 0 0 0 0 0 0 0 0 0 0 3 (361) LYS667 0 0 0 0 0 0 1 0 0 0 0 0 0 (373) PRO679 0 0 0 0 0 0 0 0 0 0 0 0 1 (375) LYS681 0 0 0 0 0 0 0 0 0 0 0 0 15 (379) MET685 0 0 0 0 0 0 0 0 0 0 0 0 7 (386) SER692 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence ivacddpdfltsyfahsRghhLSawKanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmWvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinWgirfknitqvdlfiergcqylleklneinkttsqitlKlmrrckdapiePpKymgMgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdvgpdnnq >6x77_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REV1 R518A TERNARY COMPLEX WITH DCTP AND CA2+ organism=Saccharomyces cerevisiae DNA sequence DC(T6):DG(P12) DT(T7):DA(P11) DA(T8):DT(P10) DC(T9):DG(P9) DC(T10):DG(P8) DA(T11):DT(P7) DC(T12):DG(P6) DA(T13):DT(P5) DC(T14):DG(P4) DC(T15):DG(P3) DC(T16):DG(P2) DC(T17):DG(P1) chainA ( 18) LEU325 13 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU328 2 0 0 0 0 0 0 0 0 0 0 0 ( 22) SER329 4 1 0 0 0 0 0 0 0 0 0 0 (319) ASP626 0 10 0 0 0 0 0 0 0 0 0 0 prot.sequence vacddpdfltsyfahsrLhhLSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlaalalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfsrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdvgpdnnql >6x7f_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI COUPLED TRANSCRIPTION- TRANSLATION COMPLEX B2 (TTC-B2) CONTAINING AN MRNA WITH A 24 NT LONG SPACER, TRANSCRIPTION FACTORS NUSA AND NUSG, AND FMET-TRNAS AT P- SITE AND E-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 28 10 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (240) LEU255 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6x7f_E:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Ribosomal_protein_S20; title=CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI COUPLED TRANSCRIPTION- TRANSLATION COMPLEX B2 (TTC-B2) CONTAINING AN MRNA WITH A 24 NT LONG SPACER, TRANSCRIPTION FACTORS NUSA AND NUSG, AND FMET-TRNAS AT P- SITE AND E-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6x7k_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI COUPLED TRANSCRIPTION- TRANSLATION COMPLEX B3 (TTC-B3) CONTAINING AN MRNA WITH A 24 NT LONG SPACER, TRANSCRIPTION FACTORS NUSA AND NUSG, AND FMET-TRNAS AT P- SITE AND E-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 27 8 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >6x7k_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI COUPLED TRANSCRIPTION- TRANSLATION COMPLEX B3 (TTC-B3) CONTAINING AN MRNA WITH A 24 NT LONG SPACER, TRANSCRIPTION FACTORS NUSA AND NUSG, AND FMET-TRNAS AT P- SITE AND E-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 8 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6x9i_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HUMAN DNMT1(729-1600) BOUND TO ZEBULARINE-CONTAINING 12MER DSDNA organism=Homo sapiens DNA sequence DG(C1):DC(D24) DA(C2):DT(D23) DG(C3):DC(D22) DG(C4):DC(D21) DC(C5):DG(D20) 5CM(C6):DG(D19) DG(C7):PYO(D18) DC(C8):DG(D17) DC(C9):DG(D16) DT(C10):DA(D15) DG(C11):DC(D14) DC(C12):DG(D13) chainA (441) CYS1226 0 0 0 0 0 0 13 0 0 0 0 0 (442) GLN1227 0 0 0 0 0 0 6 0 0 0 0 0 (447) MET1232 0 0 0 0 0 12 0 6 0 0 0 0 (449) ARG1234 0 0 0 0 4 18 13 0 0 0 0 0 (450) PHE1235 0 0 0 0 7 0 0 0 0 0 0 0 (451) ASN1236 0 0 0 0 0 0 1 0 0 0 0 0 (481) GLU1266 0 0 0 0 0 0 5 0 0 0 0 0 (483) VAL1268 0 0 0 0 0 0 1 0 0 0 0 0 (525) ARG1310 0 0 0 0 0 0 5 0 0 0 0 0 (527) ARG1312 0 0 0 0 0 0 8 0 0 0 0 0 (714) CYS1499 0 0 0 0 1 2 0 0 0 0 0 0 (715) LEU1500 0 0 0 0 0 2 0 0 0 0 0 0 (722) HIS1507 0 0 0 0 0 0 2 2 0 0 0 0 (723) ASN1508 0 0 0 0 0 0 0 0 0 1 0 0 (725) TRP1510 0 0 0 0 0 32 0 0 0 0 0 0 (728) LEU1513 0 0 0 0 0 2 0 0 0 0 0 0 (746) GLU1531 0 0 0 0 1 0 0 0 0 0 0 0 (748) MET1533 0 0 0 1 2 2 0 0 0 0 0 0 (750) LYS1535 0 0 0 0 0 10 6 8 0 0 0 0 (793) ASN1578 0 0 0 0 0 0 6 0 0 0 0 0 prot.sequence riswvgeavktdgkksyykkvcidaetlevgdcvsvipddsskplylarvtalwedssngqmfhahwfcagtdtvlgatsdplelflvdecedmqlsyihskvkviykapsenwameggmdktyfyqlwydqdyarfesppktqpnkfkfcvscarlaemrqkeiprvleqledldsrvlyysatkngilyrvgdgvylppeaftfnipvdedlypehyrkysdyikgsnldapepyrigrikeifcpkksngrpnetdikirvnkfyrpenthkstpasyhadinllywsdeeavvdfkavqgrctveygedlpecvqvysmggpnrfyfleaynaksksfedppnharlpklrtldvfsgcgglsegfhqagisdtlwaiemwdpaaqafrlnnpgstvftedcnillklvmagettnsrgqrlpqkgdvemlcggppcqgfsgMnRFNsrtyskfknslvvsflsycdyyrprffllenvrnfvsfkrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapracqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpevrngasaleisyngepqswfqrqlrgaqyqpilrdhickdmsalvaarmrhiplapgsdwrdlpnievrlsdgtmarklrythhdrkngrsssgalrgvcscveagkacdpaarqfntlipwClphtgnrHNhwaglygrlewdgffsttvtnpEpMgKqgrvlhpeqhrvvsvrecarsqgfpdtyrlfgnildkhrqvgnavppplakaigleiklcmlaka >6x9j_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HUMAN DNMT1(729-1600) BOUND TO ZEBULARINE-CONTAINING 12MER DSDNA AND INHIBITOR GSK3830052 organism=Homo sapiens DNA sequence DG(C1):DC(D24) DA(C2):DT(D23) DG(C3):DC(D22) DG(C4):DC(D21) DC(C5):DG(D20) 5CM(C6):DG(D19) DG(C7):PYO(D18) DC(C8):DG(D17) DC(C9):DG(D16) DT(C10):DA(D15) DG(C11):DC(D14) DC(C12):DG(D13) chainA (741) CYS1499 0 0 0 0 1 2 0 0 0 0 0 0 (742) LEU1500 0 0 0 0 0 2 0 0 0 0 0 0 (749) HIS1507 0 0 0 0 0 0 6 0 0 0 0 0 (750) ASN1508 0 0 0 0 0 0 0 0 0 1 0 0 (752) TRP1510 0 0 0 0 0 28 0 0 0 0 0 0 (775) MET1533 0 0 0 0 3 0 0 0 0 0 0 0 (777) LYS1535 0 0 0 0 0 14 6 0 0 0 0 0 prot.sequence nriswvgeavktdgkksyykkvcidaetlevgdcvsvipddsskplylarvtalwedssngqmfhahwfcagtdtvlgatsdplelflvdecedmqlsyihskvkviykapsenwameggmdpesllegddgktyfyqlwydqdyarfesppktqptednkfkfcvscarlaemrqkeiprvleqledldsrvlyysatkngilyrvgdgvylppeaftfniklsspvkrprkepvdedlypehyrkysdyikgsnldapepyrigrikeifcpkksngrpnetdikirvnkfyrpenthkstpasyhadinllywsdeeavvdfkavqgrctveygedlpecvqvysmggpnrfyfleaynaksksfedppnharklpklrtldvfsgcgglsegfhqagisdtlwaiemwdpaaqafrlnnpgstvftedcnillklvmagettnsrgqrlpqkgdvemlcggppcqgfsgmnrfnsrtyskfknslvvsflsycdyyrprffllenvrnfvsfkrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapracqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpevrngasaleisyngepqswfqrqlrgaqyqpilrdhickdmsalvaarmrhiplapgsdwrdlpnievrlsdgtmarklrythhdrkngrsssgalrgvcscveagkacdpaarqfntlipwClphtgnrHNhwaglygrlewdgffsttvtnpepMgKqgrvlhpeqhrvvsvrecarsqgfpdtyrlfgnildkhrqvgnavppplakaigleiklcmlaka >6x9k_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HUMAN DNMT1(729-1600) BOUND TO ZEBULARINE-CONTAINING 12MER DSDNA AND INHIBITOR GSK3685032A organism=Homo sapiens DNA sequence DG(D13):DC(C12) DC(D14):DG(C11) DA(D15):DT(C10) DG(D16):DC(C9) DG(D17):DC(C8) PYO(D18):DG(C7) DG(D19):5CM(C6) DG(D20):DC(C5) DC(D21):DG(C4) DC(D22):DG(C3) DT(D23):DA(C2) DC(D24):DG(C1) chainA (741) CYS1499 0 0 0 0 0 0 1 1 0 0 0 0 (742) LEU1500 0 0 0 0 0 0 1 0 0 0 0 0 (749) HIS1507 0 0 0 0 0 12 0 0 0 0 0 0 (750) ASN1508 0 0 2 0 0 0 0 0 0 0 0 0 (752) TRP1510 0 0 0 0 0 0 20 0 0 0 0 0 (775) MET1533 0 0 0 0 0 0 0 2 3 0 0 0 (777) LYS1535 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence riswvgeavktdgkksyykkvcidaetlevgdcvsvipddsskplylarvtalwedssngqmfhahwfcagtdtvlgatsdplelflvdecedmqlsyihskvkviykapsenwameggmdpesllegddgktyfyqlwydqdyarfesppktqptednkfkfcvscarlaemrqkeiprvleqledldsrvlyysatkngilyrvgdgvylppeaftfniklsspvkrprkepvdedlypehyrkysdyikgsnldapepyrigrikeifcpkksngrpnetdikirvnkfyrpenthkstpasyhadinllywsdeeavvdfkavqgrctveygedlpecvqvysmggpnrfyfleaynaksksfedppnharsklpklrtldvfsgcgglsegfhqagisdtlwaiemwdpaaqafrlnnpgstvftedcnillklvmagettnsrgqrlpqkgdvemlcggppcqgfsgmnrfnsrtyskfknslvvsflsycdyyrprffllenvrnfvsfkrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapracqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpevrngasaleisyngepqswfqrqlrgaqyqpilrdhickdmsalvaarmrhiplapgsdwrdlpnievrlsdgtmarklrythhdrkngrsssgalrgvcscveagkacdpaarqfntlipwClphtgnrHNhwaglygrlewdgffsttvtnpepMgKqgrvlhpeqhrvvsvrecarsqgfpdtyrlfgnildkhrqvgnavppplakaigleiklcmlaka >6x9q_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI COUPLED TRANSCRIPTION- TRANSLATION COMPLEX B3 (TTC-B3) CONTAINING AN MRNA WITH A 27 NT LONG SPACER, TRANSCRIPTION FACTORS NUSA AND NUSG, AND FMET-TRNAS AT P- SITE AND E-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 8 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainE (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6x9q_B:N-utilization_substance_G_protein_NusG,_N-terminal_domain;Translation_proteins_SH3-like_domain; title=CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI COUPLED TRANSCRIPTION- TRANSLATION COMPLEX B3 (TTC-B3) CONTAINING AN MRNA WITH A 27 NT LONG SPACER, TRANSCRIPTION FACTORS NUSA AND NUSG, AND FMET-TRNAS AT P- SITE AND E-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainB ( 10) PHE15 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek >6xas_B:P-loop_containing_nucleoside_triphosphate_hydrolases;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like; title=CRYOEM STRUCTURE OF E. COLI RHO-DEPENDENT TRANSCRIPTION PRE- TERMINATION COMPLEX organism=? DNA sequence DG(N1):DG(T26) DG(N2):DA(T25) DG(N3):DT(T24) DC(N4):DC(T23) DT(N5):DC(T22) DA(N6):DT(T21) DC(N7):DC(T20) DC(N8):DT(T19) DT(N9):DC(T18) DC(N10):DC(T17) DT(N11):DA(T16) DT(N15):DT(T15) DG(N16):DG(T14) DA(N17):DT(T13) DC(N18):DG(T12) DG(N19):DC(T11) DG(N20):DC(T10) DC(N21):DG(T9) DG(N22):DC(T8) DA(N23):DT(T7) DA(N24):DT(T6) DT(N25):DA(T5) DA(N26):DT(T4) DC(N27):DG(T3) DC(N28):DG(T2) DC(N29):DG(T1) chainB ( 60) ASP60 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnltelkntpvselitlgenmglenlarmrkqdiifailkqhaksgedifgdgvleilqDgfgflrsadssylagpddiyvspsqirrfnlrtgdtisgkirppkegeryfallkvnevnfdkpenarnkilfenltplhansrlrmergngstedltarvldlaspigrgqrglivappkagktmllqniaqsiaynhpdcvlmvlliderpeevtemqrlvkgevvastfdepasrhvqvaemviekakrlvehkkdviilldsitrlarayntvvpasgkvltggvdanalhrpkrffgaarnveeggsltiiatalidtgskmdeviyeefkgtgnmelhlsrkiaekrvfpaidynrsgtrkeellttqeelqkmwilrkiihpmgeidameflinklamtktnddffemmk >6xas_BIJ:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYOEM STRUCTURE OF E. COLI RHO-DEPENDENT TRANSCRIPTION PRE- TERMINATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(T1):DC(N29) DG(T2):DC(N28) DG(T3):DC(N27) DT(T4):DA(N26) DA(T5):DT(N25) DT(T6):DA(N24) DT(T7):DA(N23) DC(T8):DG(N22) DG(T9):DC(N21) DC(T10):DG(N20) DC(T11):DG(N19) DG(T12):DC(N18) DT(T13):DA(N17) DG(T14):DG(N16) DT(T15):DT(N15) DA(T16):DT(N11) DC(T17):DC(N10) DC(T18):DT(N9) DT(T19):DC(N8) DC(T20):DC(N7) DT(T21):DA(N6) DC(T22):DT(N5) DC(T23):DC(N4) DT(T24):DG(N3) DA(T25):DG(N2) DG(T26):DG(N1) chainI (541) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (542) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (261) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 (305) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 17 0 0 0 0 0 0 0 0 0 (313) ARG322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (417) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 (418) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (781) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (782) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (786) TYR795 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 60) ASP60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 prot.sequence mnltelkntpvselitlgenmglenlarmrkqdiifailkqhaksgedifgdgvleilqDgfgflrsadssylagpddiyvspsqirrfnlrtgdtisgkirppkegeryfallkvnevnfdkpenarnkilfenltplhansrlrmergngstedltarvldlaspigrgqrglivappkagktmllqniaqsiaynhpdcvlmvlliderpeevtemqrlvkgevvastfdepasrhvqvaemviekakrlvehkkdviilldsitrlarayntvvpasgkvltggvdanalhrpkrffgaarnveeggsltiiatalidtgskmdeviyeefkgtgnmelhlsrkiaekrvfpaidynrsgtrkeellttqeelqkmwilrkiihpmgeidameflinklamtktnddffemmk/mvysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvagltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/aqtkteefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkRplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgYltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6xav_BIJL: title=CRYOEM STRUCTURE OF E. COLI RHO-DEPENDENT TRANSCRIPTION PRE- TERMINATION COMPLEX BOUND WITH NUSG organism=ESCHERICHIA COLI K-12 DNA sequence DG(T1):DC(N29) DG(T2):DC(N28) DG(T3):DC(N27) DA(T5):DT(N25) DT(T6):DA(N24) DT(T7):DA(N23) DG(T9):DC(N21) DC(T10):DG(N20) DC(T11):DG(N19) DG(T12):DC(N18) DT(T13):DA(N17) DG(T14):DG(N16) DT(T15):DT(N15) DA(T16):DC(N12) DC(T17):DT(N11) DC(T18):DC(N10) DT(T19):DT(N9) DC(T20):DC(N8) DT(T21):DC(N7) DC(T22):DA(N6) DC(T23):DT(N5) DT(T24):DG(N3) DG(T26):DG(N2) DC(T27):DG(N1) chainL ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 5 0 0 0 0 0 chainI (372) PRO372 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 chainJ (270) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 (312) ARG312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (314) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 (426) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (790) THR790 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 (791) ALA791 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (795) TYR795 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence mnltelkntpvselitlgenmglenlarmrkqdiifailkqhakdifgdgvleilgfgflrsadssylagpddiyvspsqirrfnlrtgdtisgkirppkegeryfallkvnevnfdkpenarnkilfenltplhansrlrmergngstedltarvldlaspigrgqrglivappkagktmllqniaqsiaynhpdcvlmvlliderpeevtemqrlvkgevvastfdepasrhvqvaemviekakrlvehkkdviilldsitrlarayntvkvltggvdanalhrpkrffgaarnveeggsltiiatalidtgskmdeviyeefkgtgnmelhlsrkiaekrvfpaidynrsgtrkeellttqeelqkmwilrkiihpmgeidameflinklamtktnddffemmk/mvysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrPgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvagltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/vkdllkflkaqtkteefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrRgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgYltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/kkrwyvvqaFsgfegrvatslrehiklhnlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq >6xbu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=POLYMERASE DOMAIN OF POLYMERASE-THETA organism=HOMO SAPIENS DNA sequence DT(F12) DT(F11) DA(F10) DT(F6) DG(F7) DT(F8) DC(F9):DA(F10) chainA (287) LYS2209 0 3 3 0 0 0 3 (329) ASN2251 3 4 0 0 0 0 0 (557) HIS2539 1 0 0 0 0 0 0 prot.sequence eslsiidvasdqnlfqtfikewrckkrfsislacekirggddtlvvglavcwggrdayyfslldpsltlkdrmwylqsclrkesdkecsvviydfiqsykilllscgisleqsyedpkvacwlldpdsqeptlhsivtsflphelpllegmetsqgiqslglsehsgryrasvesilifnsmnqlnsllqkenlqdvfrkvempsqyclallelngigfstaecesqkhimqakldaietqsftssddiaevlflstskdvlnklkalhplpglilewrritnaitKvvfplqrekclnpflgmeriypvsqshtatgritftepniqNvprdfeikmgmpfsismrhafvpfpggsilaadysqlelrilahlshdrrliqvlntgadvfrsiaaewkmiepesvgdddrqqakqicygiiygmgakslgeqmgikendaacyidsfksrytginqfmtetvknckrdgfvqtilgrrrylpgikdnnpyrkahaerqaintivQgsaadivkiatvniqkqletfhstfkshghregmlqsdcpirggffilqlHdellyevaeedvvqvaqivknemesavklsvklkvkvkigaswgelkd >6xdq_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI COUPLED TRANSCRIPTION- TRANSLATION COMPLEX B3 (TTC-B3) CONTAINING AN MRNA WITH A 30 NT LONG SPACER, TRANSCRIPTION FACTORS NUSA AND NUSG, AND FMET-TRNAS AT P- SITE AND E-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 27 9 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (240) LEU255 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6xdq_B:N-utilization_substance_G_protein_NusG,_N-terminal_domain;Translation_proteins_SH3-like_domain; title=CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI COUPLED TRANSCRIPTION- TRANSLATION COMPLEX B3 (TTC-B3) CONTAINING AN MRNA WITH A 30 NT LONG SPACER, TRANSCRIPTION FACTORS NUSA AND NUSG, AND FMET-TRNAS AT P- SITE AND E-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek >6xdr_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX B (TTC-B) CONTAINING AN 27 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 10 29 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainE (247) ALA261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (256) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 1 (257) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 (260) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (300) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (1134) LYS1170 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfAtsdlndlyRRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6xdr_B:N-utilization_substance_G_protein_NusG,_N-terminal_domain;Translation_proteins_SH3-like_domain; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX B (TTC-B) CONTAINING AN 27 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainB ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek >6xg8_A:Ribonuclease_H-like; title=ISCTH4 TRANSPOSASE, PRE-CLEAVED COMPLEX, PCC organism=? DNA sequence DG(D1):DC(E26) DT(D2):DA(E25) DT(D3):DA(E24) DT(D4):DA(E23) DA(D5):DT(E22) DC(D6):DG(E21) DA(D7):DT(E20) DC(D8):DG(E19) DA(D9):DT(E18) DA(D10):DT(E17) DA(D11):DT(E16) DA(D12):DT(E15) DA(D13):DT(E14) DT(D14):DA(E13) DA(D15):DT(E12) DT(D16):DA(E11) DT(D17):DA(E10) DT(D18):DA(E9) DA(D19):DT(E8) DC(D20):DG(E7) DA(D21):DT(E6) DC(D22):DG(E5) DT(D23):DA(E4) DG(D24):DC(E3) DC(D25):DG(E2) DC(D26):DG(E1) chainA ( 54) TYR59 1 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) TYR69 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN71 0 0 0 0 4 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR74 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG91 0 0 0 0 0 0 11 7 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG93 0 0 0 0 1 11 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) TYR105 0 0 0 0 0 0 0 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG107 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (121) THR126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (122) ARG127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 4 0 0 0 0 0 (137) SER142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 (138) ALA143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (139) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 12 5 0 0 0 0 0 0 0 (142) SER147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (357) THR362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 3 0 0 0 (358) VAL363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (360) PRO365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 prot.sequence iitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgyekYesteeaksnYrNgyTsktlkssvgqveidipRdRnaefepkivprYkRdiseienkiiamyargmsTReineqiqeiygfevSAEmvSkitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntlkyvsdkdrkefardlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntieslnssyrrinksrTVfPgdqsllksiylatvkitskwtmryknwglilgqlqimfegr >6xg8_AB:Ribonuclease_H-like; title=ISCTH4 TRANSPOSASE, PRE-CLEAVED COMPLEX, PCC organism=? DNA sequence DG(D1):DC(E26) DT(D2):DA(E25) DT(D3):DA(E24) DT(D4):DA(E23) DA(D5):DT(E22) DC(D6):DG(E21) DA(D7):DT(E20) DC(D8):DG(E19) DA(D9):DT(E18) DA(D10):DT(E17) DA(D11):DT(E16) DA(D12):DT(E15) DA(D13):DT(E14) DT(D14):DA(E13) DA(D15):DT(E12) DT(D16):DA(E11) DT(D17):DA(E10) DT(D18):DA(E9) DA(D19):DT(E8) DC(D20):DG(E7) DA(D21):DT(E6) DC(D22):DG(E5) DT(D23):DA(E4) DG(D24):DC(E3) DC(D25):DG(E2) DC(D26):DG(E1) chainA ( 54) TYR59 1 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) TYR69 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN71 0 0 0 0 4 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR74 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG91 0 0 0 0 0 0 11 7 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG93 0 0 0 0 1 11 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) TYR105 0 0 0 0 0 0 0 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG107 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (121) THR126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (122) ARG127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 4 0 0 0 0 0 (137) SER142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 (138) ALA143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (139) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 12 5 0 0 0 0 0 0 0 (142) SER147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (357) THR362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 3 0 0 0 (358) VAL363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (360) PRO365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 chainB (216) LEU271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (219) VAL274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (224) ARG279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 (225) LYS280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (228) ALA283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (293) GLU348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence iitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgyekYesteeaksnYrNgyTsktlkssvgqveidipRdRnaefepkivprYkRdiseienkiiamyargmsTReineqiqeiygfevSAEmvSkitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntlkyvsdkdrkefardlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntieslnssyrrinksrTVfPgdqsllksiylatvkitskwtmryknwglilgqlqimfegr/kriitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgdiseienkiiamyargmstreineqiqeiygfevsaemvskitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntLkyVsdkdRKefArdlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntiEslnssyrrinksrtvfpgdqsllksiylatvkitskwtmryknwglilgqlqimfegr >6xgf_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX B (TTC-B) CONTAINING AN 30 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 29 10 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (247) ALA261 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG270 1 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG271 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ASN274 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (1134) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfAtsdlndlyRRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6xgf_E:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Ribosomal_protein_S20; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX B (TTC-B) CONTAINING AN 30 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainE (247) ALA261 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG270 1 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG271 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ASN274 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (1134) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 prot.sequence eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfAtsdlndlyRRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6xgw_A:Ribonuclease_H-like; title=ISCTH4 TRANSPOSASE, PRE-REACTION COMPLEX, PRC organism=? DNA sequence DT(E2):DA(D31) DT(E3):DA(D30) DT(E4):DA(D29) DT(E5):DA(D28) DG(E6):DC(D27) DG(E7):DC(D26) DG(E8):DC(D25) DC(E9):DG(D24) DA(E10):DT(D23) DG(E11):DC(D22) DT(E12):DA(D21) DG(E13):DC(D20) DT(E14):DA(D19) DA(E15):DT(D18) DA(E16):DT(D17) DA(E17):DT(D16) DT(E18):DA(D15) DA(E19):DT(D14) DT(E20):DA(D13) DT(E21):DA(D12) DT(E22):DA(D11) DT(E23):DA(D10) DT(E24):DA(D9) DG(E25):DC(D8) DT(E26):DA(D7) DG(E27):DC(D6) DT(E28):DA(D5) DA(E29):DT(D4) DA(E30):DT(D3) DA(E31):DT(D2) DC(E32):DG(D1) chainA ( 54) TYR59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 5 ( 64) TYR69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 ( 66) ASN71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 3 0 0 0 0 ( 69) THR74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 86) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 7 1 0 0 0 0 0 ( 88) ARG93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 9 4 0 0 0 0 (100) TYR105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 (102) ARG107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 (121) THR126 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG127 0 0 0 0 0 0 0 0 0 0 9 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) SER142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) ALA143 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 1 7 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) SER147 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) THR362 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) VAL363 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (360) PRO365 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgyekYesteeaksnYrNgyTsktlkssvgqveidipRdRnaefepkivprYkRdiseienkiiamyargmsTReineqiqeiygfevSAEmvSkitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntlkyvsdkdrkefardlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntieslnssyrrinksrTVfPgdqsllksiylatvkitskwtmryknwglilgqlqimfegr >6xgw_AB:Ribonuclease_H-like; title=ISCTH4 TRANSPOSASE, PRE-REACTION COMPLEX, PRC organism=? DNA sequence DT(E2):DA(D31) DT(E3):DA(D30) DT(E4):DA(D29) DT(E5):DA(D28) DG(E6):DC(D27) DG(E7):DC(D26) DG(E8):DC(D25) DC(E9):DG(D24) DA(E10):DT(D23) DG(E11):DC(D22) DT(E12):DA(D21) DG(E13):DC(D20) DT(E14):DA(D19) DA(E15):DT(D18) DA(E16):DT(D17) DA(E17):DT(D16) DT(E18):DA(D15) DA(E19):DT(D14) DT(E20):DA(D13) DT(E21):DA(D12) DT(E22):DA(D11) DT(E23):DA(D10) DT(E24):DA(D9) DG(E25):DC(D8) DT(E26):DA(D7) DG(E27):DC(D6) DT(E28):DA(D5) DA(E29):DT(D4) DA(E30):DT(D3) DA(E31):DT(D2) DC(E32):DG(D1) chainA ( 54) TYR59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 5 ( 64) TYR69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 ( 66) ASN71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 3 0 0 0 0 ( 69) THR74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 86) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 7 1 0 0 0 0 0 ( 88) ARG93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 9 4 0 0 0 0 (100) TYR105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 (102) ARG107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 (121) THR126 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG127 0 0 0 0 0 0 0 0 0 0 9 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) SER142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) ALA143 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 1 7 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) SER147 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) THR362 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) VAL363 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (360) PRO365 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (234) ARG284 0 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) LYS287 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) ARG288 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgyekYesteeaksnYrNgyTsktlkssvgqveidipRdRnaefepkivprYkRdiseienkiiamyargmsTReineqiqeiygfevSAEmvSkitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntlkyvsdkdrkefardlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntieslnssyrrinksrTVfPgdqsllksiylatvkitskwtmryknwglilgqlqimfegr/kriitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgprykrdiseienkiiamyargmstreineqiqeiygfevsaemvskitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntlkyvsdkdrkefaRdlKRiytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntieslnssyrrinksrtvfpgdqsllksiylatvkitskwtmryknwglilgqlqimfegr >6xgx_A: title=ISCTH4 TRANSPOSASE, STRAND TRANSFER COMPLEX 1, STC1 organism=? DNA sequence DC(E3):DG(D24) DA(E4):DT(D23) DG(E5):DC(D22) DT(E6):DA(D21) DG(E7):DC(D20) DT(E8):DA(D19) DA(E9):DT(D18) DA(E10):DT(D17) DA(E11):DT(D16) DT(E12):DA(D15) DA(E13):DT(D14) DT(E14):DA(D13) DT(E15):DA(D12) DT(E16):DA(D11) DT(E17):DA(D10) DT(E18):DA(D9) DG(E19):DC(D8) DT(E20):DA(D7) DG(E21):DC(D6) DT(E22):DA(D5) DA(E23):DT(D4) DA(E24):DT(D3) DA(E25):DT(D2) DC(E26):DG(D1) chainA ( 54) TYR59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 13 0 ( 64) TYR69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 ( 66) ASN71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 6 0 0 0 0 ( 68) TYR73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 69) THR74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 86) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 7 0 0 0 0 0 0 (100) TYR105 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (102) ARG107 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (121) THR126 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) ARG127 0 0 0 8 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) SER142 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) ALA143 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) GLU144 0 0 0 0 0 11 9 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) MET145 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) SER147 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) LYS182 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) THR362 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) VAL363 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (360) PRO365 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgyekYesteeaksnYrNgYTsktlkssvgqveidipRdrnaefepkivprYkRdiseienkiiamyargmsTReineqiqeiygfevSAEMvSkitdkilpeieewqkrplgevypivfidaihfsvKndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntlkyvsdkdrkefardlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntieslnssyrrinksrTVfPgdqsllksiylatvkitskwtmryknwglilgqlqimfegri >6xgx_AB:Ribonuclease_H-like; title=ISCTH4 TRANSPOSASE, STRAND TRANSFER COMPLEX 1, STC1 organism=? DNA sequence DG(D1):DC(E26) DT(D2):DA(E25) DT(D3):DA(E24) DT(D4):DA(E23) DA(D5):DT(E22) DC(D6):DG(E21) DA(D7):DT(E20) DC(D8):DG(E19) DA(D9):DT(E18) DA(D10):DT(E17) DA(D11):DT(E16) DA(D12):DT(E15) DA(D13):DT(E14) DT(D14):DA(E13) DA(D15):DT(E12) DT(D16):DA(E11) DT(D17):DA(E10) DT(D18):DA(E9) DA(D19):DT(E8) DC(D20):DG(E7) DA(D21):DT(E6) DC(D22):DG(E5) DT(D23):DA(E4) DG(D24):DC(E3) chainA ( 54) TYR59 0 13 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) TYR69 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN71 0 0 0 0 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) TYR73 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR74 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG91 0 0 0 0 0 0 7 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) TYR105 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG107 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (121) THR126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 (122) ARG127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 8 0 0 0 (137) SER142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 (138) ALA143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (139) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 9 11 0 0 0 0 0 (140) MET145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 (142) SER147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (177) LYS182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (357) THR362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (358) VAL363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 (360) PRO365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 chainB (293) ASN345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 prot.sequence iitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgyekYesteeaksnYrNgYTsktlkssvgqveidipRdrnaefepkivprYkRdiseienkiiamyargmsTReineqiqeiygfevSAEMvSkitdkilpeieewqkrplgevypivfidaihfsvKndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntlkyvsdkdrkefardlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttntieslnssyrrinksrTVfPgdqsllksiylatvkitskwtmryknwglilgqlqimfegri/arkriitpekkelirnliseynitsakdlqealkdllgdtiqnmleaeldehlgrdiseienkiiamyargmstreineqiqeiygfevsaemvskitdkilpeieewqkrplgevypivfidaihfsvkndgivgkkavyivlaidiegqkdvigiyvgenesskfwlsvlndlknrgvkdililcadalsgikdainaafpnteyqrcivhqirntlkyvsdkdrkefardlkriytapnekagydqmlevsekwekkypaamkswksnwdvicpffkyseelrkimyttNtieslnssyrrinksrtvfpgdqsllksiylatvkitskwtmryknwglilgqlqimfegri >6xh7_CDFGH:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CUER-TAC WITHOUT RNA organism=ESCHERICHIA COLI DNA sequence DC(21):DC(182) DG(22):DA(181) DC(23):DG(180) DC(24):DT(179) DG(25):DC(178) DC(26):DT(177) DG(27):DG(176) DT(28):DA(175) DC(29):DC(174) DA(210):DG(173) DG(211):DT(172) DA(218):DG(171) DG(219):DT(170) DG(220):DG(169) DA(221):DT(168) DG(222):DC(167) DG(223):DC(166) DT(224):DA(165) DT(225):DA(164) DA(226):DT(163) DA(227):DT(162) DA(228):DT(161) DC(229):DG(160) DC(230):DG(159) DT(231):DA(158) DT(232):DA(157) DC(233):DG(156) DC(234):DG(155) DA(235):DT(154) DG(236):DC(153) DC(237):DG(152) DA(238):DT(151) DA(239):DT(150) DG(240):DC(149) DG(241):DC(148) DG(242):DC(147) DG(243):DC(146) DA(244):DT(145) DA(245):DT(144) DG(246):DC(143) DG(247):DC(142) DT(248):DA(141) DC(249):DG(140) DA(250):DT(139) DA(251):DT(138) DG(252):DC(137) DG(253):DC(136) DC(254):DG(135) chainC (141) ARG143 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG175 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 1 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 8 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG201 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) TYR367 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 1 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG394 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (512) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 20) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (467) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (468) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (469) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 4 11 5 0 0 0 (470) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 7 3 (472) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 chainG ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 3 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingteRvivsqlhrspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiYrmmRpgEPptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveRavkerlslgdldtlmpqdminakpisaavkeffgSsqlsqFmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttdpVRmyMreMgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkYtNrglqfldliqegniglmkavdkFEyrRgYkfSTYatWWirQaitrsIadqartiripvHmietiNklNrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpIgDdedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvTRERiRqieakalrklrhpsrsevlrsfldd/mnisdvakitgltsKairFyeekglvtppmrsengYrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalanacpgddsadcpiienlsgcc/mnisdvakitgltsKaiRFyeekglvtppmrsengYrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalanacpgddsadcpiienlsgcc >6xh7_H:Putative_DNA-binding_domain; title=CUER-TAC WITHOUT RNA organism=? DNA sequence DC(21):DC(182) DG(22):DA(181) DC(23):DG(180) DC(24):DT(179) DG(25):DC(178) DC(26):DT(177) DG(27):DG(176) DT(28):DA(175) DC(29):DC(174) DA(210):DG(173) DG(211):DT(172) DA(218):DG(171) DG(219):DT(170) DG(220):DG(169) DA(221):DT(168) DG(222):DC(167) DG(223):DC(166) DT(224):DA(165) DT(225):DA(164) DA(226):DT(163) DA(227):DT(162) DA(228):DT(161) DC(229):DG(160) DC(230):DG(159) DT(231):DA(158) DT(232):DA(157) DC(233):DG(156) DC(234):DG(155) DA(235):DT(154) DG(236):DC(153) DC(237):DG(152) DA(238):DT(151) DA(239):DT(150) DG(240):DC(149) DG(241):DC(148) DG(242):DC(147) DG(243):DC(146) DA(244):DT(145) DA(245):DT(144) DG(246):DC(143) DG(247):DC(142) DT(248):DA(141) DC(249):DG(140) DA(250):DT(139) DA(251):DT(138) DG(252):DC(137) DG(253):DC(136) DC(254):DG(135) chainH ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 3 0 0 0 0 0 0 prot.sequence mnisdvakitgltsKaiRFyeekglvtppmrsengYrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalanacpgddsadcpiienlsgcc >6xh8_CDFGH:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CUER-TRANSCRIPTION ACTIVATION COMPLEX WITH RNA TRANSCRIPT organism=ESCHERICHIA COLI DNA sequence DG(135):DC(254) DC(136):DG(253) DC(137):DG(252) DT(138):DA(251) DT(139):DA(250) DG(140):DC(249) DA(141):DT(248) DC(142):DG(247) DC(143):DG(246) DT(144):DA(245) DT(145):DA(244) DC(146):DG(243) DC(147):DG(242) DC(148):DG(241) DC(149):DG(240) DT(150):DA(239) DT(151):DA(238) DG(152):DC(237) DC(153):DG(236) DT(154):DA(235) DG(155):DC(234) DG(156):DC(233) DA(157):DT(232) DA(158):DT(231) DG(159):DC(230) DG(160):DC(229) DT(161):DA(228) DT(162):DA(227) DT(163):DA(226) DA(164):DT(225) DA(165):DT(224) DC(166):DG(223) DC(167):DG(222) DT(168):DA(221) DG(169):DG(220) DT(170):DG(219) DG(171):DA(218) DT(172):DT(217) DG(173):DG(216) DC(174):DC(215) DA(175):DT(214) DG(176):DC(213) DT(177):DA(212) DC(178):DG(211) DT(179):DA(210) DG(180):DC(29) DA(181):DT(28) DC(182):DG(27) DG(183):DC(26) DC(184):DG(25) DG(185):DC(24) DG(186):DC(23) DC(187):DG(22) DG(188):DC(21) chainC (173) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 4 0 0 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 4 0 0 0 0 0 0 0 0 0 0 0 (199) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 chainD (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainF ( 20) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) LYS392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) THR583 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG584 0 0 0 0 0 0 10 18 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) GLU585 0 0 0 1 13 11 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) ARG586 3 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) ARG588 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 7 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 2 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveRavkerlslgdldtlmpqdminakpisaavkeffgSsqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttdpVRmyMremgtveLlTregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiaKkYtnrglqfldliqegniglmkavdkFEyrRgYkfSTYatWwirQaitrsIadqartiripvHmietinklNrisrqmlqemgreptpeelaermlmpedkirkvlkiaKepIsmetpIgDdeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvTRERiRqieakalrklrhpsrsevlrsfldd/mnisdvakitgltsKairFyeekglvtppmrsengyrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalanacpgddsadcpiienlsgcc/mnisdvakitgltsKaiRFyeekglvtppmrsengYrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalanacpgddsadcpiienlsgcc >6xh8_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CUER-TRANSCRIPTION ACTIVATION COMPLEX WITH RNA TRANSCRIPT organism=? DNA sequence DG(135):DC(254) DC(136):DG(253) DC(137):DG(252) DT(138):DA(251) DT(139):DA(250) DG(140):DC(249) DA(141):DT(248) DC(142):DG(247) DC(143):DG(246) DT(144):DA(245) DT(145):DA(244) DC(146):DG(243) DC(147):DG(242) DC(148):DG(241) DC(149):DG(240) DT(150):DA(239) DT(151):DA(238) DG(152):DC(237) DC(153):DG(236) DT(154):DA(235) DG(155):DC(234) DG(156):DC(233) DA(157):DT(232) DA(158):DT(231) DG(159):DC(230) DG(160):DC(229) DT(161):DA(228) DT(162):DA(227) DT(163):DA(226) DA(164):DT(225) DA(165):DT(224) DC(166):DG(223) DC(167):DG(222) DT(168):DA(221) DG(169):DG(220) DT(170):DG(219) DG(171):DA(218) DT(172):DT(217) DG(173):DG(216) DC(174):DC(215) DA(175):DT(214) DG(176):DC(213) DT(177):DA(212) DC(178):DG(211) DT(179):DA(210) DG(180):DC(29) DA(181):DT(28) DC(182):DG(27) DG(183):DC(26) DC(184):DG(25) DG(185):DC(24) DG(186):DC(23) DC(187):DG(22) DG(188):DC(21) chainD (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >6xii_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX B (TTC-B) CONTAINING AN 24 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 29 10 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (247) ALA261 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG270 1 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG271 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ASN274 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (1134) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqveka/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfAtsdlndlyRRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6xii_E:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Ribosomal_protein_S20; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX B (TTC-B) CONTAINING AN 24 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainE (247) ALA261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (256) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 1 (257) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 (260) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (300) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (1134) LYS1170 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfAtsdlndlyRRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6xij_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A (TTC-A) CONTAINING AN 24 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DC(62):DG(5122) DC(63):DG(5121) DC(64):DG(5120) DT(65):DA(5119) DG(66):DC(5118) DT(67):DA(5117) DC(68):DG(5116) DT(69):DA(5115) DG(610):DC(5114) DG(611):DC(5113) DC(612):DG(5112) DG(613):DC(5111) DT(614):DA(5110) DC(615):DT(5109) DC(616):DT(5108) DT(617):DA(5103) DC(618):DT(5102) DT(619):DT(5101) DC(620):DA(5100) DA(621):DT(599) DC(622):DA(598) DC(623):DC(597) DT(624):DT(596) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 14 27 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6xij_ABE:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COMPLEX A (TTC-A) CONTAINING AN 24 NT LONG MRNA SPACER, NUSG, AND FMET-TRNAS AT E-SITE AND P-SITE organism=? DNA sequence DT(596):DT(624) DC(597):DC(623) DA(598):DC(622) DT(599):DA(621) DA(5100):DC(620) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (150) ARG151 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 27 14 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 chainB ( 10) PHE15 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (240) LEU255 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgsdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraniksakkraiqsekarkhnasrrsmmrtfikkvyaaieagdkaAaqkafnemqpivdrqaakglihknkaarhkanltaqinkla >6xjd_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=TWO MOUSE CGAS CATALYTIC DOMAIN BINDING TO HUMAN ASSEMBLED NUCLEOSOME organism=HOMO SAPIENS DNA sequence DC(J1):DG(I145) DA(J2):DT(I144) DG(J3):DC(I143) DG(J4):DC(I142) DA(J5):DT(I141) DT(J6):DA(I140) DG(J7):DC(I139) DT(J8):DA(I138) DA(J9):DT(I137) DT(J10):DA(I136) DA(J11):DT(I135) DT(J12):DA(I134) DA(J13):DT(I133) DT(J14):DA(I132) DC(J15):DG(I131) DT(J16):DA(I130) DG(J17):DC(I129) DA(J18):DT(I128) DC(J19):DG(I127) DA(J20):DT(I126) DC(J21):DG(I125) DG(J22):DC(I124) DT(J23):DA(I123) DG(J24):DC(I122) DC(J25):DG(I121) DC(J26):DG(I120) DT(J27):DA(I119) DG(J28):DC(I118) DG(J29):DC(I117) DA(J30):DT(I116) DG(J31):DC(I115) DA(J32):DT(I114) DC(J33):DG(I113) DT(J34):DA(I112) DA(J35):DT(I111) DG(J36):DC(I110) DG(J37):DC(I109) DG(J38):DC(I108) DA(J39):DT(I107) DG(J40):DC(I106) DT(J41):DA(I105) DA(J42):DT(I104) DA(J43):DT(I103) DT(J44):DA(I102) DC(J45):DG(I101) DC(J46):DG(I100) DC(J47):DG(I99) DC(J48):DG(I98) DT(J49):DA(I97) DT(J50):DA(I96) DG(J51):DC(I95) DG(J52):DC(I94) DC(J53):DG(I93) DG(J54):DC(I92) DG(J55):DC(I91) DT(J56):DA(I90) DT(J57):DA(I89) DA(J58):DT(I88) DA(J59):DT(I87) DA(J60):DT(I86) DA(J61):DT(I85) DC(J62):DG(I84) DG(J63):DC(I83) DC(J64):DG(I82) DG(J65):DC(I81) DG(J66):DC(I80) DG(J67):DC(I79) DG(J68):DC(I78) DG(J69):DC(I77) DA(J70):DT(I76) DC(J71):DG(I75) DA(J72):DT(I74) DG(J73):DC(I73) DC(J74):DG(I72) DG(J75):DC(I71) DC(J76):DG(I70) DG(J77):DC(I69) DT(J78):DA(I68) DA(J79):DT(I67) DC(J80):DG(I66) DG(J81):DC(I65) DT(J82):DA(I64) DG(J83):DC(I63) DC(J84):DG(I62) DG(J85):DC(I61) DT(J86):DA(I60) DT(J87):DA(I59) DT(J88):DA(I58) DA(J89):DT(I57) DA(J90):DT(I56) DG(J91):DC(I55) DC(J92):DG(I54) DG(J93):DC(I53) DG(J94):DC(I52) DT(J95):DA(I51) DG(J96):DC(I50) DC(J97):DG(I49) DT(J98):DA(I48) DA(J99):DT(I47) DG(J100):DC(I46) DA(J101):DT(I45) DG(J102):DC(I44) DC(J103):DG(I43) DT(J104):DA(I42) DG(J105):DC(I41) DT(J106):DA(I40) DC(J107):DG(I39) DT(J108):DA(I38) DA(J109):DT(I37) DC(J110):DG(I36) DG(J111):DC(I35) DA(J112):DT(I34) DC(J113):DG(I33) DC(J114):DG(I32) DA(J115):DT(I31) DA(J116):DT(I30) DT(J117):DA(I29) DT(J118):DA(I28) DG(J119):DC(I27) DA(J120):DT(I26) DG(J121):DC(I25) DC(J122):DG(I24) DG(J123):DC(I23) DG(J124):DC(I22) DC(J125):DG(I21) DC(J126):DG(I20) DT(J127):DA(I19) DC(J128):DG(I18) DG(J129):DC(I17) DG(J130):DC(I16) DC(J131):DG(I15) DA(J132):DT(I14) DC(J133):DG(I13) DC(J134):DG(I12) DG(J135):DC(I11) DG(J136):DC(I10) DG(J137):DC(I9) DA(J138):DT(I8) DT(J139):DA(I7) DT(J140):DA(I6) DC(J141):DG(I5) DT(J142):DA(I4) DC(J143):DG(I3) DC(J144):DT(I1) chainA ( 3) HIS39 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 13) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence kpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/rdniqgitkpaiRrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/krsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/kpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavll/rSrkesysvyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >6xl5_CDFGH:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYO-EM STRUCTURE OF ECMRR-RNAP-PROMOTER OPEN COMPLEX (ECMRR-RPO) organism=ESCHERICHIA COLI O157:H7 DNA sequence DC(T1):DG(N88) DG(T2):DC(N87) DC(T3):DG(N86) DC(T4):DG(N85) DG(T5):DC(N84) DC(T6):DG(N83) DG(T7):DC(N82) DT(T8):DA(N81) DC(T9):DG(N80) DA(T10):DT(N79) DG(T11):DC(N78) DA(T12):DT(N77) DC(T13):DG(N76) DT(T14):DA(N75) DC(T15):DC(N74) DG(T16):DG(N73) DT(T17):DT(N72) DA(T18):DG(N71) DG(T19):DT(N70) DG(T20):DG(N69) DA(T21):DT(N68) DA(T22):DT(N67) DT(T23):DA(N66) DC(T24):DG(N65) DT(T25):DA(N64) DA(T26):DT(N63) DA(T27):DT(N62) DA(T28):DT(N61) DC(T29):DG(N60) DC(T30):DG(N59) DC(T31):DG(N58) DT(T32):DA(N57) DC(T33):DG(N56) DC(T34):DG(N55) DC(T35):DG(N54) DC(T36):DG(N53) DT(T37):DA(N52) DT(T38):DA(N51) DA(T39):DT(N50) DG(T40):DC(N49) DG(T41):DC(N48) DG(T42):DC(N47) DG(T43):DC(N46) DA(T44):DT(N45) DG(T45):DC(N44) DG(T46):DC(N43) DG(T47):DC(N42) DT(T48):DA(N41) DC(T49):DG(N40) DA(T50):DT(N39) DA(T51):DT(N38) DG(T52):DC(N37) DG(T53):DC(N36) DC(T54):DG(N35) chainC (137) ASN139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) LYS503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (536) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (545) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (565) PRO567 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1240) LYS1242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1262) GLN1264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) GLN465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 10) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (436) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (446) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 (447) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 1 0 0 0 0 0 0 (448) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 8 0 0 0 0 (449) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 (451) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 (452) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 chainG ( 15) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 15) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfviNgtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgSWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvRveRavkerlslgdldtlmpqdminakPisaavKEffgSsqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegPniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddKmharstgsyslvtqqplggkaQfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnKrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdQmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/seigrttdpVRmyMreMgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdidpelarekfaelraqyvvtrdtikhataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNRglqFldliqegniglmkavdkFEyrRgYkfSTYaTWWirQaiTRsiadqartiripvHmiEtiNklNrisRqmlqemgreptpeelaermlmpedkirkvlkiakepismetpIgddedshlgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvTRERiRQieakalrklrhpsrsevlrsfldd/sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv/sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv >6xl5_H:Putative_DNA-binding_domain;Probable_bacterial_effector-binding_domain; title=CRYO-EM STRUCTURE OF ECMRR-RNAP-PROMOTER OPEN COMPLEX (ECMRR-RPO) organism=ESCHERICHIA COLI O157:H7 DNA sequence DC(T1):DG(N88) DG(T2):DC(N87) DC(T3):DG(N86) DC(T4):DG(N85) DG(T5):DC(N84) DC(T6):DG(N83) DG(T7):DC(N82) DT(T8):DA(N81) DC(T9):DG(N80) DA(T10):DT(N79) DG(T11):DC(N78) DA(T12):DT(N77) DC(T13):DG(N76) DT(T14):DA(N75) DC(T15):DC(N74) DG(T16):DG(N73) DT(T17):DT(N72) DA(T18):DG(N71) DG(T19):DT(N70) DG(T20):DG(N69) DA(T21):DT(N68) DA(T22):DT(N67) DT(T23):DA(N66) DC(T24):DG(N65) DT(T25):DA(N64) DA(T26):DT(N63) DA(T27):DT(N62) DA(T28):DT(N61) DC(T29):DG(N60) DC(T30):DG(N59) DC(T31):DG(N58) DT(T32):DA(N57) DC(T33):DG(N56) DC(T34):DG(N55) DC(T35):DG(N54) DC(T36):DG(N53) DT(T37):DA(N52) DT(T38):DA(N51) DA(T39):DT(N50) DG(T40):DC(N49) DG(T41):DC(N48) DG(T42):DC(N47) DG(T43):DC(N46) DA(T44):DT(N45) DG(T45):DC(N44) DG(T46):DC(N43) DG(T47):DC(N42) DT(T48):DA(N41) DC(T49):DG(N40) DA(T50):DT(N39) DA(T51):DT(N38) DG(T52):DC(N37) DG(T53):DC(N36) DC(T54):DG(N35) chainH ( 15) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 prot.sequence sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv >6xl6_GH: title=CRYO-EM STRUCTURE OF ECMRR-DNA COMPLEX IN ECMRR-RPO organism=ESCHERICHIA COLI DNA sequence DA(T27):DT(N62) DA(T28):DT(N61) DC(T29):DG(N60) DC(T30):DG(N59) DC(T31):DG(N58) DT(T32):DA(N57) DC(T33):DG(N56) DC(T34):DG(N55) DC(T35):DG(N54) DC(T36):DG(N53) DT(T37):DA(N52) DT(T38):DA(N51) DA(T39):DT(N50) DG(T40):DC(N49) DG(T41):DC(N48) DG(T42):DC(N47) DG(T43):DC(N46) DA(T44):DT(N45) DG(T45):DC(N44) DG(T46):DC(N43) DG(T47):DC(N42) DT(T48):DA(N41) DC(T49):DG(N40) chainG ( 15) LYS16 0 0 0 0 0 0 4 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 15) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 3 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 prot.sequence sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv/sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv >6xl6_H:Putative_DNA-binding_domain;Probable_bacterial_effector-binding_domain; title=CRYO-EM STRUCTURE OF ECMRR-DNA COMPLEX IN ECMRR-RPO organism=ESCHERICHIA COLI DNA sequence DA(T27):DT(N62) DA(T28):DT(N61) DC(T29):DG(N60) DC(T30):DG(N59) DC(T31):DG(N58) DT(T32):DA(N57) DC(T33):DG(N56) DC(T34):DG(N55) DC(T35):DG(N54) DC(T36):DG(N53) DT(T37):DA(N52) DT(T38):DA(N51) DA(T39):DT(N50) DG(T40):DC(N49) DG(T41):DC(N48) DG(T42):DC(N47) DG(T43):DC(N46) DA(T44):DT(N45) DG(T45):DC(N44) DG(T46):DC(N43) DG(T47):DC(N42) DT(T48):DA(N41) DC(T49):DG(N40) chainH ( 15) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 3 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 prot.sequence sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv >6xl9_CDFGH:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYO-EM STRUCTURE OF ECMRR-RNAP-PROMOTER INITIAL TRANSCRIBING COMPLEX WITH 3-NT RNA TRANSCRIPT (ECMRR-RPITC-3NT) organism=ESCHERICHIA COLI O157:H7 DNA sequence DC(T1):DG(N88) DG(T2):DC(N87) DC(T3):DG(N86) DC(T4):DG(N85) DG(T5):DC(N84) DC(T6):DG(N83) DG(T7):DC(N82) DT(T8):DA(N81) DC(T9):DG(N80) DA(T10):DT(N79) DG(T11):DC(N78) DA(T12):DT(N77) DC(T13):DG(N76) DT(T14):DA(N75) DC(T15):DC(N74) DG(T16):DG(N73) DT(T17):DT(N72) DA(T18):DG(N71) DG(T19):DT(N70) DG(T20):DG(N69) DA(T21):DT(N68) DA(T22):DT(N67) DT(T23):DA(N66) DC(T24):DG(N65) DT(T25):DA(N64) DA(T26):DT(N63) DA(T27):DT(N62) DA(T28):DT(N61) DC(T29):DG(N60) DC(T30):DG(N59) DC(T31):DG(N58) DT(T32):DA(N57) DC(T33):DG(N56) DC(T34):DG(N55) DC(T35):DG(N54) DC(T36):DG(N53) DT(T37):DA(N52) DT(T38):DA(N51) DA(T39):DT(N50) DG(T40):DC(N49) DG(T41):DC(N48) DG(T42):DC(N47) DG(T43):DC(N46) DA(T44):DT(N45) DG(T45):DC(N44) DG(T46):DC(N43) DG(T47):DC(N42) DT(T48):DA(N41) DC(T49):DG(N40) DA(T50):DT(N39) DA(T51):DT(N38) DG(T52):DC(N37) DG(T53):DC(N36) DC(T54):DG(N35) chainC ( 53) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) SER182 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 5 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (463) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (464) VAL466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) VAL469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) LYS503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (271) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (363) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) LEU519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (435) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 (436) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 5 0 0 0 0 0 0 (437) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 4 0 0 0 0 (438) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 (440) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 (441) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 chainG ( 15) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 15) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrSvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyRgSWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfRVglVRveravkerlslgdldtlmpqdminakPisaavKEffgSsqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/grttdpVRmyMremgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrvensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNrglqFldliqegniglmkavdkFEyrRgYkfSTYaTWWirQaiTRsiadqartiripvHmietinklnRisRqmlqemgreptpeelaermlmpedkirkvlkiakepIsmeTpIgDDedshLgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvTRERiRQieakalrklrhpsrsevlrsfldd/sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv/sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv >6xl9_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF ECMRR-RNAP-PROMOTER INITIAL TRANSCRIBING COMPLEX WITH 3-NT RNA TRANSCRIPT (ECMRR-RPITC-3NT) organism=? DNA sequence DG(N35):DC(T54) DC(N36):DG(T53) DC(N37):DG(T52) DT(N38):DA(T51) DT(N39):DA(T50) DG(N40):DC(T49) DA(N41):DT(T48) DC(N42):DG(T47) DC(N43):DG(T46) DC(N44):DG(T45) DT(N45):DA(T44) DC(N46):DG(T43) DC(N47):DG(T42) DC(N48):DG(T41) DC(N49):DG(T40) DT(N50):DA(T39) DA(N51):DT(T38) DA(N52):DT(T37) DG(N53):DC(T36) DG(N54):DC(T35) DG(N55):DC(T34) DG(N56):DC(T33) DA(N57):DT(T32) DG(N58):DC(T31) DG(N59):DC(T30) DG(N60):DC(T29) DT(N61):DA(T28) DT(N62):DA(T27) DT(N63):DA(T26) DA(N64):DT(T25) DG(N65):DC(T24) DA(N66):DT(T23) DT(N67):DA(T22) DT(N68):DA(T21) DG(N69):DG(T20) DT(N70):DG(T19) DG(N71):DA(T18) DT(N72):DT(T17) DG(N73):DG(T16) DC(N74):DC(T15) DA(N75):DT(T14) DG(N76):DC(T13) DT(N77):DA(T12) DC(N78):DG(T11) DT(N79):DA(T10) DG(N80):DC(T9) DA(N81):DT(T8) DC(N82):DG(T7) DG(N83):DC(T6) DC(N84):DG(T5) DG(N85):DC(T4) DG(N86):DC(T3) DC(N87):DG(T2) DG(N88):DC(T1) chainF ( 7) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (271) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (363) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) LEU519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (435) THR583 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (436) ARG584 0 0 0 0 0 0 5 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) GLU585 0 0 0 0 4 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG586 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) ARG588 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) GLN589 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence grttdpVRmyMremgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrvensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNrglqFldliqegniglmkavdkFEyrRgYkfSTYaTWWirQaiTRsiadqartiripvHmietinklnRisRqmlqemgreptpeelaermlmpedkirkvlkiakepIsmeTpIgDDedshLgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvTRERiRQieakalrklrhpsrsevlrsfldd >6xla_G:Putative_DNA-binding_domain;Probable_bacterial_effector-binding_domain; title=CRYO-EM STRUCTURE OF ECMRR-DNA COMPLEX IN ECMRR-RPITC-3NT organism=? DNA sequence DA(T27):DT(N62) DA(T28):DT(N61) DC(T29):DG(N60) DC(T30):DG(N59) DC(T31):DG(N58) DT(T32):DA(N57) DC(T33):DG(N56) DC(T34):DG(N55) DC(T35):DG(N54) DC(T36):DG(N53) DT(T37):DA(N52) DT(T38):DA(N51) DA(T39):DT(N50) DG(T40):DC(N49) DG(T41):DC(N48) DG(T42):DC(N47) DG(T43):DC(N46) DA(T44):DT(N45) DG(T45):DC(N44) DG(T46):DC(N43) DG(T47):DC(N42) DT(T48):DA(N41) DC(T49):DG(N40) chainG ( 15) LYS16 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv >6xla_GH: title=CRYO-EM STRUCTURE OF ECMRR-DNA COMPLEX IN ECMRR-RPITC-3NT organism=ESCHERICHIA COLI DNA sequence DA(T27):DT(N62) DA(T28):DT(N61) DC(T29):DG(N60) DC(T30):DG(N59) DC(T31):DG(N58) DT(T32):DA(N57) DC(T33):DG(N56) DC(T34):DG(N55) DC(T35):DG(N54) DC(T36):DG(N53) DT(T37):DA(N52) DT(T38):DA(N51) DA(T39):DT(N50) DG(T40):DC(N49) DG(T41):DC(N48) DG(T42):DC(N47) DG(T43):DC(N46) DA(T44):DT(N45) DG(T45):DC(N44) DG(T46):DC(N43) DG(T47):DC(N42) DT(T48):DA(N41) DC(T49):DG(N40) chainG ( 15) LYS16 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 15) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 prot.sequence sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv/sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv >6xlj_CDFGH:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYO-EM STRUCTURE OF ECMRR-RNAP-PROMOTER INITIAL TRANSCRIBING COMPLEX WITH 4-NT RNA TRANSCRIPT (ECMRR-RPITC-4NT) organism=ESCHERICHIA COLI O157:H7 DNA sequence DG(N35):DC(T54) DC(N36):DG(T53) DC(N37):DG(T52) DT(N38):DA(T51) DT(N39):DA(T50) DG(N40):DC(T49) DA(N41):DT(T48) DC(N42):DG(T47) DC(N43):DG(T46) DC(N44):DG(T45) DT(N45):DA(T44) DC(N46):DG(T43) DC(N47):DG(T42) DC(N48):DG(T41) DC(N49):DG(T40) DT(N50):DA(T39) DA(N51):DT(T38) DA(N52):DT(T37) DG(N53):DC(T36) DG(N54):DC(T35) DG(N55):DC(T34) DG(N56):DC(T33) DA(N57):DT(T32) DG(N58):DC(T31) DG(N59):DC(T30) DG(N60):DC(T29) DT(N61):DA(T28) DT(N62):DA(T27) DT(N63):DA(T26) DA(N64):DT(T25) DG(N65):DC(T24) DA(N66):DT(T23) DT(N67):DA(T22) DT(N68):DA(T21) DG(N69):DC(T20) DT(N70):DA(T19) DG(N71):DC(T18) DT(N72):DA(T17) DG(N73):DC(T16) DC(N74):DG(T15) DA(N75):DT(T14) DG(N76):DC(T13) DT(N77):DA(T12) DC(N78):DG(T11) DT(N79):DA(T10) DG(N80):DC(T9) DA(N81):DT(T8) DC(N82):DG(T7) DG(N83):DC(T6) DC(N84):DG(T5) DG(N85):DC(T4) DG(N86):DC(T3) DC(N87):DG(T2) DG(N88):DC(T1) chainC ( 53) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) VAL56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 9 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) ASP393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (463) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) VAL469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) LYS503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 chainD (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 chainF ( 10) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (436) LEU573 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) THR583 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) ARG584 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) GLU585 0 0 0 0 9 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) ARG586 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (451) ARG588 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) GLN589 0 0 2 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 15) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 15) LYS16 0 0 0 0 0 0 0 0 0 0 0 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrSVfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyRgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgEpptreaaeslfenlffseDrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfRvglVRveravkerlslgdldtlmpqdminakPisaavKEffgSsqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/seigrttdpVRmyMreMgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdidpelarekfaelraqyvvtrdtikhataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNrglqFldliqegniglmkavdkFEyrRgYkfSTYaTWWirQaiTRsiadqartiripvHmiEtinklnrisRqmlqemgreptpeelaermlmpedkirkvlkiakepIsmetpIgdDedshlgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvTRERiRQieakalrklrhpsrsevlrsfldd/sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv/sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv >6xlj_G:Putative_DNA-binding_domain;Probable_bacterial_effector-binding_domain; title=CRYO-EM STRUCTURE OF ECMRR-RNAP-PROMOTER INITIAL TRANSCRIBING COMPLEX WITH 4-NT RNA TRANSCRIPT (ECMRR-RPITC-4NT) organism=? DNA sequence DG(N35):DC(T54) DC(N36):DG(T53) DC(N37):DG(T52) DT(N38):DA(T51) DT(N39):DA(T50) DG(N40):DC(T49) DA(N41):DT(T48) DC(N42):DG(T47) DC(N43):DG(T46) DC(N44):DG(T45) DT(N45):DA(T44) DC(N46):DG(T43) DC(N47):DG(T42) DC(N48):DG(T41) DC(N49):DG(T40) DT(N50):DA(T39) DA(N51):DT(T38) DA(N52):DT(T37) DG(N53):DC(T36) DG(N54):DC(T35) DG(N55):DC(T34) DG(N56):DC(T33) DA(N57):DT(T32) DG(N58):DC(T31) DG(N59):DC(T30) DG(N60):DC(T29) DT(N61):DA(T28) DT(N62):DA(T27) DT(N63):DA(T26) DA(N64):DT(T25) DG(N65):DC(T24) DA(N66):DT(T23) DT(N67):DA(T22) DT(N68):DA(T21) DG(N69):DC(T20) DT(N70):DA(T19) DG(N71):DC(T18) DT(N72):DA(T17) DG(N73):DC(T16) DC(N74):DG(T15) DA(N75):DT(T14) DG(N76):DC(T13) DT(N77):DA(T12) DC(N78):DG(T11) DT(N79):DA(T10) DG(N80):DC(T9) DA(N81):DT(T8) DC(N82):DG(T7) DG(N83):DC(T6) DC(N84):DG(T5) DG(N85):DC(T4) DG(N86):DC(T3) DC(N87):DG(T2) DG(N88):DC(T1) chainG ( 15) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv >6xlk_G:Putative_DNA-binding_domain;Probable_bacterial_effector-binding_domain; title=CRYO-EM STRUCTURE OF ECMRR-DNA COMPLEX IN ECMRR-RPITC-4NT organism=ESCHERICHIA COLI DNA sequence DG(N40):DC(T49) DA(N41):DT(T48) DC(N42):DG(T47) DC(N43):DG(T46) DC(N44):DG(T45) DT(N45):DA(T44) DC(N46):DG(T43) DC(N47):DG(T42) DC(N48):DG(T41) DC(N49):DG(T40) DT(N50):DA(T39) DA(N51):DT(T38) DA(N52):DT(T37) DG(N53):DC(T36) DG(N54):DC(T35) DG(N55):DC(T34) DG(N56):DC(T33) DA(N57):DT(T32) DG(N58):DC(T31) DG(N59):DC(T30) DG(N60):DC(T29) DT(N61):DA(T28) DT(N62):DA(T27) chainG ( 15) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 1 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 prot.sequence sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv >6xlk_GH: title=CRYO-EM STRUCTURE OF ECMRR-DNA COMPLEX IN ECMRR-RPITC-4NT organism=ESCHERICHIA COLI DNA sequence DG(N40):DC(T49) DA(N41):DT(T48) DC(N42):DG(T47) DC(N43):DG(T46) DC(N44):DG(T45) DT(N45):DA(T44) DC(N46):DG(T43) DC(N47):DG(T42) DC(N48):DG(T41) DC(N49):DG(T40) DT(N50):DA(T39) DA(N51):DT(T38) DA(N52):DT(T37) DG(N53):DC(T36) DG(N54):DC(T35) DG(N55):DC(T34) DG(N56):DC(T33) DA(N57):DT(T32) DG(N58):DC(T31) DG(N59):DC(T30) DG(N60):DC(T29) DT(N61):DA(T28) DT(N62):DA(T27) chainG ( 15) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 1 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 chainH ( 15) LYS16 0 0 0 0 0 1 4 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) HIS19 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR20 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR38 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv/sqiglfskicrvtiKtlHYynkigllvpayinpdngYrfytsdqlmkfhqiaslrqlgftiteivtltqdenschiierrrleiqkqirdmadmlsrinhylqhkkkerimlyqaalkeipecivyskrfivpdfssyiklippigqevmkanpgltlttpaycftlyhdkeykeknmdvefceavndfgknegniifqvipaitavtvihkgpydslrnayiylmqwvedngylltnspresyidgiwnkqdsaewmteiqfpvekv >6xll_CDF: title=CRYO-EM STRUCTURE OF E. COLI RNAP-PROMOTER INITIAL TRANSCRIBING COMPLEX WITH 5-NT RNA TRANSCRIPT (RPITC-5NT) organism=ESCHERICHIA COLI O157:H7 DNA sequence DC(T1):DG(N88) DG(T2):DC(N87) DC(T3):DG(N86) DC(T4):DG(N85) DG(T5):DC(N84) DC(T6):DG(N83) DG(T7):DC(N82) DT(T8):DA(N81) DC(T9):DG(N80) DA(T10):DT(N79) DG(T11):DC(N78) DA(T12):DT(N77) DC(T13):DG(N76) DT(T14):DG(N71) DG(T15):DT(N70) DC(T16):DG(N69) DA(T17):DA(N66) DC(T18):DG(N65) DA(T19):DA(N64) DA(T26):DT(N63) DA(T27):DT(N62) DA(T28):DT(N61) DC(T29):DG(N60) DC(T30):DG(N59) DC(T31):DG(N58) DT(T32):DA(N57) DC(T33):DG(N56) DC(T34):DG(N55) DC(T35):DG(N54) DC(T36):DG(N53) DT(T37):DA(N52) DT(T38):DA(N51) DA(T39):DT(N50) DG(T40):DC(N49) DG(T41):DC(N48) DG(T42):DC(N47) DG(T43):DC(N46) DA(T44):DT(N45) DG(T45):DC(N44) DG(T46):DC(N43) DG(T47):DC(N42) DT(T48):DA(N41) DC(T49):DG(N40) DA(T50):DT(N39) DA(T51):DT(N38) DG(T52):DC(N37) DG(T53):DC(N36) DC(T54):DG(N35) chainC (180) SER182 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 2 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) THR539 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) ASP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 8) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) LEU519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (448) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 3 0 0 0 0 0 0 (449) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (451) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 (452) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgSWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEPptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpgglTreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLDggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/seigrttDpVRmyMreMgtvelltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdidpelarekfaelraqyvvtrdtikhataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlRlvisiakkytnrglqFldliqegniglmkavdkFeyrRgYkfsTYatWWirQaiTRsiadqartiripvHmiEtinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepIsmetpIgdDedshLgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtRERiRQieakalrklrhpsrsevlrsfldd >6xll_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF E. COLI RNAP-PROMOTER INITIAL TRANSCRIBING COMPLEX WITH 5-NT RNA TRANSCRIPT (RPITC-5NT) organism=? DNA sequence DG(N35):DC(T54) DC(N36):DG(T53) DC(N37):DG(T52) DT(N38):DA(T51) DT(N39):DA(T50) DG(N40):DC(T49) DA(N41):DT(T48) DC(N42):DG(T47) DC(N43):DG(T46) DC(N44):DG(T45) DT(N45):DA(T44) DC(N46):DG(T43) DC(N47):DG(T42) DC(N48):DG(T41) DC(N49):DG(T40) DT(N50):DA(T39) DA(N51):DT(T38) DA(N52):DT(T37) DG(N53):DC(T36) DG(N54):DC(T35) DG(N55):DC(T34) DG(N56):DC(T33) DA(N57):DT(T32) DG(N58):DC(T31) DG(N59):DC(T30) DG(N60):DC(T29) DT(N61):DA(T28) DT(N62):DA(T27) DT(N63):DA(T26) DA(N64):DA(T19) DG(N65):DC(T18) DT(N68):DA(T17) DG(N69):DC(T16) DT(N70):DG(T15) DG(N71):DT(T14) DG(N76):DC(T13) DT(N77):DA(T12) DC(N78):DG(T11) DT(N79):DA(T10) DG(N80):DC(T9) DA(N81):DT(T8) DC(N82):DG(T7) DG(N83):DC(T6) DC(N84):DG(T5) DG(N85):DC(T4) DG(N86):DC(T3) DC(N87):DG(T2) DG(N88):DC(T1) chainD (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) ASP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLDggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >6xlm_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF E.COLI RNAP-DNA ELONGATION COMPLEX 1 (RDE1) IN ECMRR-DEPENDENT TRANSCRIPTION organism=? DNA sequence DC(T1):DG(N88) DG(T2):DC(N87) DC(T3):DG(N86) DC(T4):DG(N85) DG(T5):DC(N84) DC(T6):DG(N83) chainC (539) GLU541 0 0 0 0 0 17 (540) ARG542 0 0 0 0 0 19 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >6xlm_CD: title=CRYO-EM STRUCTURE OF E.COLI RNAP-DNA ELONGATION COMPLEX 1 (RDE1) IN ECMRR-DEPENDENT TRANSCRIPTION organism=ESCHERICHIA COLI O157:H7 DNA sequence DG(N83):DC(T6) DC(N84):DG(T5) DG(N85):DC(T4) DG(N86):DC(T3) DC(N87):DG(T2) DG(N88):DC(T1) chainC (539) GLU541 17 0 0 0 0 0 (540) ARG542 19 0 0 0 0 0 chainD prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvritEYekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >6xln_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF E. COLI RNAP-DNA ELONGATION COMPLEX 2 (RDE2) IN ECMRR-DEPENDENT TRANSCRIPTION organism=? DNA sequence DC(T1):DG(N88) DG(T2):DC(N87) DC(T3):DG(N86) DC(T4):DG(N85) DG(T5):DC(N84) DC(T6):DG(N83) chainC (540) ARG542 0 0 0 0 0 14 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >6xln_CD: title=CRYO-EM STRUCTURE OF E. COLI RNAP-DNA ELONGATION COMPLEX 2 (RDE2) IN ECMRR-DEPENDENT TRANSCRIPTION organism=ESCHERICHIA COLI O157:H7 DNA sequence DG(N83):DC(T6) DC(N84):DG(T5) DG(N85):DC(T4) DG(N86):DC(T3) DC(N87):DG(T2) DG(N88):DC(T1) chainC (540) ARG542 14 0 0 0 0 0 chainD prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteYekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >6xnx_B:Galactose_oxidase,_central_domain; title=STRUCTURE OF RAG1 (R848M/E649V)-RAG2-DNA STRAND TRANSFER COMPLEX (DYNAMIC-FORM) organism=MUS MUSCULUS DNA sequence DC(I3) DA(I4) DG(I5) DG(I6) DA(I7) DT(I8) DA(I9) DG(I10) DG(I11) DG(I12) DC(I13) DT(I14) DA(I15) DC(I16) chainB (112) LYS118 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence malqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykkhqyiihggktpnnelsdkiyimsvacknnKkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnamseafyfytlrc >6xnz_A: title=STRUCTURE OF RAG1 (R848M/E649V)-RAG2-DNA TARGET CAPTURE COMPLEX organism=MUS MUSCULUS DNA sequence DG(I5):DC(J33) DG(I6):DC(J32) DA(I7):DT(J31) DT(I8):DA(J30) DA(I9):DT(J29) DG(I10):DC(J28) DG(I11):DC(J27) DG(I12):DC(J26) DC(I13):DG(J25) DT(I14):DA(J24) DA(I15):DT(J23) DC(I16):DG(J22) DC(I17):DG(J21) DG(I18):DC(J20) DC(I19):DG(J19) DC(I20):DG(J18) DG(I21):DC(J17) DG(I22):DC(J16) DT(I23):DA(J15) DA(I24):DT(J14) DG(I25):DC(J13) DC(I26):DG(J12) DC(I27):DG(J11) DC(I28):DG(J10) DT(I29):DA(J9) DA(I30):DT(J8) DT(I31):DA(J7) DC(I32):DG(J6) DC(I33):DG(J5) DT(I34):DA(J4) DG(I35):DC(J3) chainA (142) ASP600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) ASP604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) GLU662 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) ASP708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) SER721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (337) HIS795 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) LYS806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (389) MET847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (390) MET848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 25 0 0 0 0 0 0 0 0 0 0 0 0 0 (504) GLU962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescDgmgDvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnsvlcckplclmladEsdhetltailspliaereamksseltlemggiprtfkfifrgtgyDeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalHcdignaaefyKifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpiMMmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnEsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna >6xnz_AC:Galactose_oxidase,_central_domain; title=STRUCTURE OF RAG1 (R848M/E649V)-RAG2-DNA TARGET CAPTURE COMPLEX organism=? DNA sequence DC(J3):DG(I35) DA(J4):DT(I34) DG(J5):DC(I33) DG(J6):DC(I32) DA(J7):DT(I31) DT(J8):DA(I30) DA(J9):DT(I29) DG(J10):DC(I28) DG(J11):DC(I27) DG(J12):DC(I26) DC(J13):DG(I25) DT(J14):DA(I24) DA(J15):DT(I23) DC(J16):DG(I22) DC(J17):DG(I21) DG(J18):DC(I20) DG(J19):DC(I19) DC(J20):DG(I18) DG(J21):DC(I17) DG(J22):DC(I16) DT(J23):DA(I15) DA(J24):DT(I14) DG(J25):DC(I13) DC(J26):DG(I12) DC(J27):DG(I11) DC(J28):DG(I10) DT(J29):DA(I9) DA(J30):DT(I8) DT(J31):DA(I7) DC(J32):DG(I6) DC(J33):DG(I5) chainA (142) ASP600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) ASP604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (204) GLU662 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) ASP708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) SER721 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) HIS795 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) LYS806 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) MET847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (390) MET848 0 0 0 0 0 0 0 0 0 0 0 0 0 50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (504) GLU962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (142) ASP600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 (250) ASP708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (263) SER721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (337) HIS795 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 (389) MET847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52 12 0 0 0 0 0 0 0 0 0 0 0 0 (390) MET848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 (504) GLU962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescDgmgDvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnsvlcckplclmladEsdhetltailspliaereamksseltlemggiprtfkfifrgtgyDeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalHcdignaaefyKifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpiMMmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnEsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna/gsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescDgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnsvlcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgyDeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalHcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpiMMmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnEsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahn >6xnz_BD:Galactose_oxidase,_central_domain; title=STRUCTURE OF RAG1 (R848M/E649V)-RAG2-DNA TARGET CAPTURE COMPLEX organism=MUS MUSCULUS DNA sequence DG(I5):DC(J33) DG(I6):DC(J32) DA(I7):DT(J31) DT(I8):DA(J30) DA(I9):DT(J29) DG(I10):DC(J28) DG(I11):DC(J27) DG(I12):DC(J26) DC(I13):DG(J25) DT(I14):DA(J24) DA(I15):DT(J23) DC(I16):DG(J22) DC(I17):DG(J21) DG(I18):DC(J20) DC(I19):DG(J19) DC(I20):DG(J18) DG(I21):DC(J17) DG(I22):DC(J16) DT(I23):DA(J15) DA(I24):DT(J14) DG(I25):DC(J13) DC(I26):DG(J12) DC(I27):DG(J11) DC(I28):DG(J10) DT(I29):DA(J9) DA(I30):DT(J8) DT(I31):DA(J7) DC(I32):DG(J6) DC(I33):DG(J5) DT(I34):DA(J4) DG(I35):DC(J3) chainB ( 40) SER40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (329) LYS336 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) GLN337 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) SER340 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (329) LYS336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) ALA338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence malqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrScptgvfhfdikqnhlklkpaifskdscylpplrypatcsykhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnKQamSeafyfytlrc/malqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnKqAseafyfytlrcs >6xtx_234567: title=CRYOEM STRUCTURE OF HUMAN CMG BOUND TO ATPGAMMAS AND DNA organism=HOMO SAPIENS DNA sequence DT(M1) DT(M2) DT(M3) DT(M4) DT(M5) DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) chain2 (374) ARG562 0 13 0 0 0 0 0 0 0 0 0 (381) TRP569 29 8 0 0 0 0 0 0 0 0 0 chain3 chain4 (393) LEU556 0 0 0 2 0 0 0 0 0 0 0 chain5 (368) ARG420 0 0 0 0 0 0 0 0 1 5 1 chain6 (382) ARG435 0 3 1 0 0 0 0 0 0 0 0 (389) PHE442 0 11 2 0 0 0 0 0 0 0 0 (434) ALA487 0 1 0 0 0 0 0 0 0 0 0 chain7 (373) ARG420 0 0 0 0 0 9 4 0 0 0 0 prot.sequence edlkghsvrewvsmagprleihhrfknflrthvdshghnvfkerisdmckenreslvvnyedlaarehvlayflpeapaellqifdeaalevvlamypkydritnhihvrishlplveelrslrqlhlnqlirtsgvvtsctgvlpqlsmvkyncnkcnfvlgpfcqsqnqevkpgscpecqsagpfevnmeetiyqnyqririqespgkvaagrlprskdailladlvdsckpgdeieltgiyhnnydgslntangfpvfatvilanhvakkdnkdvkmitslskdqqigekifasiapsiyghedikrglalalfggepknpggkhkvrgdinvllcgdpgtaksqflkyiekvssraifttgqgltayvqRhpvsreWtleagalvladrgvclidefdkmndqdrtsiheameqqsisiskagivtslqarctviaaanpiggrydpsltfsenvdltepiisrfdilcvvrdtvdpvqdemlarfvvgshvrhhpslpqevlkkyiiyakervhpklnqmdqdkvakmysdlrkesmatgsipitvrhiesmirmaeaharihlrdyvieddvnmairvmlesfidtqkfsvmrsmrktfarylsfrrdnnelllfilkqlvaeqvtyqrnrfgaqqdtievpekdlvdkarqinihnlsafydselfrmnkfshdlkrkmilqqf/mlprspplprgnlwelreaqrdyldflddeedqgiyqskvrelisdnqyrlivnvndlrrknekranrllnnafeelvafqralkdfvasidatyakqyeefyvglegsfgskhvsprtltscflscvvcvegivtkcslvrpkvvrsvhycpatkktierrysdlttlvafpsssvyptkdeennpleteyglsvykdhqtitiqempekapagqlprsvdvildddlvdkakpgdrvqvvgtyrclpgkkggytsgtfrtvliacnvkqmskdaqpsfsaediakikkfsktrskdifdqlakslapsihghdyvkkailclllggverdlengshirgdinilligdpsvaksqllryvlctapraipttGrgssgvGltaavttdqetgerrleagamvladrgvvcidefdkmsdmdrtaihevmeqgrvtiakagiharlnarcsvlaaanpvygrydqyktpmeniglqdsllsrfdllfimldqmdpeqdreisdhvlrmhryvsaafmkkyihvakiikpvltqesatyiaeeysrlrsqdsmssdtartspvtartletlirlatahakarmsktvdlqdaeeavelvqyayfkkvle/nvaackenfqrflqrfidplakeeiteplymqrlgeinvigepflnvncehiksfdknlyrqlisypqeviptfdmavneiffdrypdsilehqiqvrpfnalktknmrnlnpedidqlitisgmvirtsqlipemqeaffqcqvcahttrvemdrgriaepsvcgrchtthsmalihnrslfsdkqmiklqespedmpagqtphtvilfahndlvdkvqpgdrvnvtgiyravpirvnprvsnvksvykthidvihyrktdakrlhgldeeaeqklfsekrvellkelsrkpdiyerlasalapsiyehedikkgillqlfggtrkdfshtgrgkfraeinillcgdpgtsksqllqyvynlvprgqytsgkgssavgltayvmkdpetrqLvlqtgalvlsdngiccidefdkmnestrsvlhevmeqqtlsiakagiicqlnartsvlaaanpiesqwnpkkttieniqlphtllsrfdlifllldpqdeaydrrlahhlvalyyqldmavlkdyiayahstimprlseeasqalieayvdmrkigssrgmvsayprqleslirlaeahakvrlsnkveaidveeakrlhrealk/adegqarksqlqrrfkeflrqyrvgtdrtgftfkyrdelkrhynlgeywievemedlasfdedladylykqpaehlqlleeaakevadevtrprpsgeevlqdiqvmlksdaspssirslksdmmshlvkipgiiiaasavrakatrisiqcrscrntltniamrpglegyalprkcncpldpyfimpdkckcvdfqtlklqelpdavphgemprhmqlycdrylcdkvvpgnrvtimgiysikkfgvgvgirssyirvlgiqvdtvspqeeeefrrlaalpnvyevisksiapsifggtdmkkaiacllfggsrkrlpdgltrrgdinllmlgdpgtaksqllkfvekcspigvytsaagltasvmRdpssrnfimeggamvladggvvcidefdkmreddrvaiheameqqtisiakagitttlnsrcsvlaaanfmptilsrfdmifivkdehneerdvmlakhvitlhvsidlaklkkfiaycrvkcgprlsaeaaeklknryiimrsgarqherdsdrrssipitvrqleaivriaealskmklqpfateadveealrlfqvstldaalsgt/hlevrdevaekcqklfldfleefqssdgeikylqlaeelirperntlvvsfvdleqfnqqlsttiqeefyrvypylcralktfvkdrkeiplakdfyvafqdlptrhkireltssriglltrisgqvvrthpvhpelvsgtflcldcqtvirdveqqfkytqpnicrnpvcanrrrflldtnksrfvdfqkvriqetqaelprgsiprslevilraeavesaqagdkcdftgtlivvpdvskllsyrlvflaccvaptnprfggkeqtaesiknqmtvkewekvfemsqdknlyhnlctslfptihgndevkrgvllmlfggvpkttgegtslrgdinvcivgdpstaksqflkhveefspravytsgkassaagltaavvRdeesheFvieagalmladngvccidefdkmdvrdqvaiheameqqtisitkAgvkatlnartsilaaanpisghydrskslkqninlsapimsrfdlffilvdecnevtdyaiarrivdlhsrieesidrvyslddirryllfarqfkpkiskesedfiveqykhlrqrdgsgvtksswritvrqlesmirlseamarmhccdevqpkhvkeafrllnksiirvetpeycrisnlivlhlrkveeeedesalkrselvnwylkeieseidseeelinkkriiekvihrlthydhvli/dyalekekvkkflqefyqddelgkkqfkygnqlvrlahreqvalyvdlddvaeddpelvdsicenarryaklfadavqellpqykqypaelmrrfelyfqgpssnkprvirevradsvgklvtvrgivtrvsevkpkmvvatytcdqcgaetyqpiqsptfmplimcpsqecqtnrsggrlylqtrgsrfikfqemkmqehsdqvpvgniprsitvlvegentriaqpgdhvsvtgiflpilrgllsetyleahrivkmnkseddesgageltreelrqiaeedfyeklaasiapeiyghedvkkalllllvggvdqsprgmkirgniniclmgdpgvaksqllsyidrlaprsqyttgrgssgvgltaavlRdsvsgeltleggalvladqgvccidefdkmaeadrtaihevmeqqtisiakagilttlnarcsilaaanpaygrynprrsleqniqlpaallsrfdllwliqdrpdrdndlrlaqhityvhqhsrqppsqfepldmklmrryiamcrekqpmvpesladyitaayvemrreawaskdatytsartllailrlstalarlrmvdvvekedvneairlmemskdsll >6xu0_A:Ribonuclease_H-like; title=ARCHAEOGLOBUS FULGIDUS ARGONAUTE PROTEIN WITH DNA OLIGODUPLEX 5'- PATCGTGGCCACGAT organism=? DNA sequence DC(S9):DG(R6) DA(S10):DT(R5) DC(S11):DG(R4) DG(S12):DC(R3) DA(S13):DT(R2) chainA (134) ILE143 0 0 0 0 3 (139) ASN148 0 0 0 0 5 (142) PHE151 0 0 0 0 23 (143) TYR152 0 0 0 0 15 (146) ASN155 0 0 0 0 6 prot.sequence gltyrigngasvpisntgelikglrnygpyevpslkynqialihnnqfsslinqlksqisskidevwhihninisefiydsphfdsiksqvdnaidtgvdgimlvlpeyntplyyklksylinsipsqfmrydIlsnrNltFYvdNllvqfvsklggkpwilnvdpekgsdiiigtgatridnvnlfcfamvfkkdgtmlwneispivtsseyltylkstikkvvygfkksnpdwdvekltlhvsgkrpkmkdgetkilketveelkkqemvsrdvkyailhlnethpfwvmpyegtkvklsskrylltllqpmvtpikplsveivsdnwtseeyyhnvheildeiyylskmnwrgfRsrnlpvtvnypklvagiianvnryggypinpegnrslqtnpwfl >6xup_A:Ribonuclease_H-like; title=ARCHAEOGLOBUS FULGIDUS ARGONAUTE PROTEIN WITH DNA OLIGODUPLEX 5'- PATCGTGGCCACGAT organism=ARCHAEOGLOBUS FULGIDUS DNA sequence DA(S10):DT(R5) DC(S11):DG(R4) DG(S12):DC(R3) DA(S13):DT(R2) chainA (134) ILE143 0 0 0 2 (139) ASN148 0 0 0 5 (142) PHE151 0 0 0 29 (143) TYR152 0 0 0 15 (146) ASN155 0 0 0 7 prot.sequence gltyrigngasvpisntgelikglrnygpyevpslkynqialihnnqfsslinqlksqisskidevwhihninisefiydsphfdsiksqvdnaidtgvdgimlvlpeyntplyyklksylinsipsqfmrydIlsnrNltFYvdNllvqfvsklggkpwilnvdpekgsdiiigtgatridnvnlfcfamvfkkdgtmlwneispivtsseyltylkstikkvvygfkksnpdwdvekltlhvsgkrpkmkdgetkilketveelkkqemvsrdvkyailhlnethpfwvmpyegtkvklsskrylltllqpmvtpikplsveivsdnwtseeyyhnvheildeiyylskmnwrgfRsrnlpvtvnypklvagiianvnryggypinpegnrslqtnpwfl >6xwg_C:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RXR/RAR DNA-BINDING DOMAIN HETERODIMER BOUND TO THE HUMAN RARB2 DR5 RESPONSE ELEMENT organism=? DNA sequence DA(A1):DT(B21) DG(A2):DC(B20) DG(A3):DC(B19) DG(A4):DC(B18) DT(A5):DA(B17) DT(A6):DA(B16) DC(A7):DG(B15) DA(A8):DT(B14) DC(A9):DG(B13) DC(A10):DG(B12) DG(A11):DC(B11) DA(A12):DT(B10) DA(A13):DT(B9) DA(A14):DT(B8) DG(A15):DC(B7) DT(A16):DA(B6) DT(A17):DA(B5) DC(A18):DG(B4) DA(A19):DT(B3) DC(A20):DG(B2) DT(A21):DA(B1) chainC ( 22) GLU153 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS156 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS160 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG161 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeerq >6xwg_CD:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RXR/RAR DNA-BINDING DOMAIN HETERODIMER BOUND TO THE HUMAN RARB2 DR5 RESPONSE ELEMENT organism=HOMO SAPIENS DNA sequence DA(A1):DT(B21) DG(A2):DC(B20) DG(A3):DC(B19) DG(A4):DC(B18) DT(A5):DA(B17) DT(A6):DA(B16) DC(A7):DG(B15) DA(A8):DT(B14) DC(A9):DG(B13) DC(A10):DG(B12) DG(A11):DC(B11) DA(A12):DT(B10) DA(A13):DT(B9) DA(A14):DT(B8) DG(A15):DC(B7) DT(A16):DA(B6) DT(A17):DA(B5) DC(A18):DG(B4) DA(A19):DT(B3) DC(A20):DG(B2) DT(A21):DA(B1) chainC ( 22) GLU153 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS156 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS160 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG161 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 25) GLU106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 6 0 0 0 0 ( 28) LYS109 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 2 0 0 0 0 0 ( 32) ARG113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 33) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 prot.sequence khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeerq/priykpcfvcqdkssgyhygvsacEgcKgffRRsiqknmvytchrdknciinkvtrnrcqycrlqkcfevgmskesvrnd >6xwh_C:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RXR DNA-BINDING DOMAIN HOMODIMER BOUND TO THE HUMAN HOXB13 DR0 RESPONSE ELEMENT organism=Homo sapiens DNA sequence DG(A1):DC(B16) DA(A2):DT(B15) DA(A3):DT(B14) DG(A4):DC(B13) DG(A5):DC(B12) DT(A6):DA(B11) DC(A7):DG(B10) DA(A8):DT(B9) DA(A9):DT(B8) DG(A10):DC(B7) DG(A11):DC(B6) DC(A12):DG(B5) DC(A13):DG(B4) DA(A14):DT(B3) DA(A15):DT(B2) DG(A16):DC(B1) chainC ( 23) GLU153 0 0 0 1 10 6 0 0 0 0 0 0 0 0 0 0 ( 26) LYS156 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) LYS160 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 ( 31) ARG161 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 ( 79) ARG209 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeRq >6xwh_CD:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN RXR DNA-BINDING DOMAIN HOMODIMER BOUND TO THE HUMAN HOXB13 DR0 RESPONSE ELEMENT organism=Homo sapiens DNA sequence DG(A1):DC(B16) DA(A2):DT(B15) DA(A3):DT(B14) DG(A4):DC(B13) DG(A5):DC(B12) DT(A6):DA(B11) DC(A7):DG(B10) DA(A8):DT(B9) DA(A9):DT(B8) DG(A10):DC(B7) DG(A11):DC(B6) DC(A12):DG(B5) DC(A13):DG(B4) DA(A14):DT(B3) DA(A15):DT(B2) DG(A16):DC(B1) chainC ( 23) GLU153 0 0 0 1 10 6 0 0 0 0 0 0 0 0 0 0 ( 26) LYS156 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 ( 30) LYS160 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 ( 31) ARG161 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 ( 79) ARG209 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 22) GLU153 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 ( 25) LYS156 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 29) LYS160 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 30) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 prot.sequence tkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeRq/khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeer >6y35_A: title=CCAAT-BINDING COMPLEX FROM ASPERGILLUS FUMIGATUS WITH CYCA DNA organism=? DNA sequence DA(E3):DT(D25) DC(E4):DG(D24) DC(E5):DG(D23) DC(E6):DG(D22) DG(E7):DC(D21) DC(E8):DG(D20) DC(E9):DG(D19) DA(E10):DT(D18) DA(E11):DT(D17) DT(E12):DA(D16) DC(E13):DG(D15) DA(E14):DT(D14) DG(E15):DC(D13) DA(E16):DT(D12) DT(E17):DA(D11) DG(E18):DC(D10) DC(E19):DG(D9) DA(E20):DT(D8) DT(E21):DA(D7) DG(E22):DC(D6) DA(E23):DT(D5) DT(E24):DA(D4) DG(E25):DC(D3) chainA ( 35) ARG272 0 0 0 0 0 0 0 0 1 8 8 5 0 0 0 0 0 0 0 0 0 0 0 ( 38) HIS275 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG279 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG281 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG286 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) PHE287 0 0 0 0 0 0 26 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence yvnakqfhrilkrrvarqkleeqlrlrkpylhesRhnHamrRpRgpggRFlta >6y35_ABC:Histone-fold;Leucine_zipper_domain; title=CCAAT-BINDING COMPLEX FROM ASPERGILLUS FUMIGATUS WITH CYCA DNA organism=ASPERGILLUS FUMIGATUS A1163 DNA sequence DC(D3):DG(E25) DA(D4):DT(E24) DT(D5):DA(E23) DC(D6):DG(E22) DA(D7):DT(E21) DT(D8):DA(E20) DG(D9):DC(E19) DC(D10):DG(E18) DA(D11):DT(E17) DT(D12):DA(E16) DC(D13):DG(E15) DT(D14):DA(E14) DG(D15):DC(E13) DA(D16):DT(E12) DT(D17):DA(E11) DT(D18):DA(E10) DG(D19):DC(E9) DG(D20):DC(E8) DC(D21):DG(E7) DG(D22):DC(E6) DG(D23):DC(E5) DG(D24):DC(E4) DT(D25):DA(E3) chainA ( 35) ARG272 0 0 0 0 0 0 0 0 0 0 0 5 8 8 1 0 0 0 0 0 0 0 0 ( 38) HIS275 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 ( 42) ARG279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 ( 44) ARG281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 ( 49) ARG286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 ( 50) PHE287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 26 0 0 0 0 0 0 chainB ( 11) ALA49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainC ( 33) ALA90 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence yvnakqfhrilkrrvarqkleeqlrlrkpylhesRhnHamrRpRgpggRFlta/mkeqdrwlpiAnvarimklalpenakiakeakecmqecvsefisfitseasekcqqekrktvngedilfamtslgfenyaealkiylskyre/gtardilttywqhiinhlesdnhdykihqlplArikkvmkadpevkmisaeapilfakgcdifiteltmrawihaednkrrtlqrsdiaaalsksdmfdflidivpr >6y36_A: title=CCAAT-BINDING COMPLEX FROM ASPERGILLUS FUMIGATUS WITH CCCA DNA organism=? DNA sequence DC(D3):DG(E25) DA(D4):DT(E24) DC(D5):DG(E23) DG(D6):DC(E22) DG(D7):DC(E21) DA(D8):DT(E20) DG(D9):DC(E19) DG(D10):DC(E18) DC(D11):DG(E17) DG(D12):DC(E16) DT(D13):DA(E15) DT(D14):DA(E14) DG(D15):DC(E13) DA(D16):DT(E12) DT(D17):DA(E11) DT(D18):DA(E10) DG(D19):DC(E9) DG(D20):DC(E8) DT(D21):DA(E7) DG(D22):DC(E6) DG(D23):DC(E5) DA(D24):DT(E4) DT(D25):DA(E3) chainA ( 33) ARG272 0 0 0 0 0 0 0 0 0 0 0 5 12 7 1 0 0 0 0 0 0 0 0 ( 36) HIS275 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 ( 37) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 40) ARG279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 8 0 0 0 0 0 0 0 ( 42) ARG281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 ( 47) ARG286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 ( 48) PHE287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 26 0 0 0 0 0 0 prot.sequence yvnakqfhrilkrrvarqkleeqlrkpylhesRhnHAmrRpRgpggRFlta >6y36_ABC:Histone-fold;Leucine_zipper_domain; title=CCAAT-BINDING COMPLEX FROM ASPERGILLUS FUMIGATUS WITH CCCA DNA organism=ASPERGILLUS FUMIGATUS A1163 DNA sequence DA(E3):DT(D25) DT(E4):DA(D24) DC(E5):DG(D23) DC(E6):DG(D22) DA(E7):DT(D21) DC(E8):DG(D20) DC(E9):DG(D19) DA(E10):DT(D18) DA(E11):DT(D17) DT(E12):DA(D16) DC(E13):DG(D15) DA(E14):DT(D14) DA(E15):DT(D13) DC(E16):DG(D12) DG(E17):DC(D11) DC(E18):DG(D10) DC(E19):DG(D9) DT(E20):DA(D8) DC(E21):DG(D7) DC(E22):DG(D6) DG(E23):DC(D5) DT(E24):DA(D4) DG(E25):DC(D3) chainA ( 33) ARG272 0 0 0 0 0 0 0 0 1 7 12 5 0 0 0 0 0 0 0 0 0 0 0 ( 36) HIS275 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ALA276 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG279 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG281 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG286 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) PHE287 0 0 0 0 0 0 26 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 11) ALA49 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC prot.sequence yvnakqfhrilkrrvarqkleeqlrkpylhesRhnHAmrRpRgpggRFlta/mkeqdrwlpiAnvarimklalpenakiakeakecmqecvsefisfitseasekcqqekrktvngedilfamtslgfenyaealkiylskyre/gtardilttyWqhiinhlesdnhdykihqlplarikkvmkadpevkmisaeapilfakgcdifiteltmrawihaednkrrtlqrsdiaaalsksdmfdflidivpr >6y37_ABC:Histone-fold;Leucine_zipper_domain; title=CCAAT-BINDING COMPLEX FROM ASPERGILLUS NIDULANS WITH CCCA DNA organism=ASPERGILLUS NIDULANS FGSC A4 DNA sequence DT(D3):DA(E25) DC(D4):DG(E24) DA(D5):DT(E23) DC(D6):DG(E22) DT(D7):DA(E21) DT(D8):DA(E20) DC(D9):DG(E19) DG(D10):DC(E18) DC(D11):DG(E17) DT(D12):DA(E16) DC(D13):DG(E15) DT(D14):DA(E14) DG(D15):DC(E13) DA(D16):DT(E12) DT(D17):DA(E11) DT(D18):DA(E10) DG(D19):DC(E9) DG(D20):DC(E8) DC(D21):DG(E7) DT(D22):DA(E6) DC(D23):DG(E5) DG(D24):DC(E4) DG(D25):DC(E3) chainA ( 43) ARG273 0 0 0 0 0 0 0 0 0 0 0 5 11 5 1 0 0 0 0 0 0 0 0 ( 46) HIS276 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 ( 47) ALA277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 50) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 ( 52) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 0 0 0 ( 57) ARG287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 ( 58) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 31 0 0 0 0 0 0 chainB ( 10) ALA51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainC prot.sequence esplyvnakqfhrilkrrvarqkleeqlrltskgrkpylhesRhnHAmrRpRgpggRFlt/keqdrwlpiAnvarimklalpenakiakeakecmqecvsefisfitseasekcqqekrktvngedilfamtslgfenyaealkiylskyre/gtwanvnqgLqgtardilttywqhvinhlesdnhdykihqlplarikkvmkadpevkmisaeapilfakgcdvfiteltmrawihaednkrrtlqrsdiaaalsksdmfdflidivpr >6y37_B:Histone-fold; title=CCAAT-BINDING COMPLEX FROM ASPERGILLUS NIDULANS WITH CCCA DNA organism=? DNA sequence DC(E3):DG(D25) DC(E4):DG(D24) DG(E5):DC(D23) DA(E6):DT(D22) DG(E7):DC(D21) DC(E8):DG(D20) DC(E9):DG(D19) DA(E10):DT(D18) DA(E11):DT(D17) DT(E12):DA(D16) DC(E13):DG(D15) DA(E14):DT(D14) DG(E15):DC(D13) DA(E16):DT(D12) DG(E17):DC(D11) DC(E18):DG(D10) DG(E19):DC(D9) DA(E20):DT(D8) DA(E21):DT(D7) DG(E22):DC(D6) DT(E23):DA(D5) DG(E24):DC(D4) DA(E25):DT(D3) chainB ( 10) ALA51 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence keqdrwlpiAnvarimklalpenakiakeakecmqecvsefisfitseasekcqqekrktvngedilfamtslgfenyaealkiylskyre >6y39_BCEFHI:Histone-fold; title=HAPE-P88L MUTANT CCAAT-BINDING COMPLEX FROM ASPERGILLUS NIDULANS WITH CYCA DNA organism=ASPERGILLUS NIDULANS FGSC A4 DNA sequence DC(J3):DG(K25) DA(J4):DT(K24) DT(J5):DA(K23) DC(J6):DG(K22) DC(J7):DG(K21) DT(J8):DA(K20) DA(J9):DT(K19) DC(J10):DG(K18) DC(J11):DG(K17) DT(J12):DA(K16) DC(J13):DG(K15) DT(J14):DA(K14) DG(J15):DC(K13) DA(J16):DT(K12) DT(J17):DA(K11) DT(J18):DA(K10) DG(J19):DC(K9) DG(J20):DC(K8) DT(J21):DA(K7) DC(J22):DG(K6) DA(J23):DT(K5) DA(J24):DT(K4) DT(J25):DA(K3) chainB chainC chainE chainF chainH ( 23) LYS66 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI prot.sequence eqdrwlpianvarimklalpenakiakeakecmqecvsefisfitseasekcqqekrktvngedilfamtslgfenyaealkiylskyre/gtwanvnqglqgtardilttywqhvinhlesdnhdykihqlllarikkvmkadpevkmisaeapilfakgcdvfiteltmrawihaednkrrtlqrsdiaaalsksdmfdflidivpr/qdrwlpianvarimklalpenakiakeakecmqecvsefisfitseasekcqqekrktvngedilfamtslgfenyaealkiylsky/gtwanvnqglqgtardilttywqhvinhlesdnhdykihqlllarikkvmkadpevkmisaeapilfakgcdvfiteltmrawihaednkrrtlqrsdiaaalsksdmfdflidivp/qdrwlpianvarimklalpenaKiakeakecmqecvsefisfitseasekcqqekrktvngedilfamtslgfenyaealkiylsky/gtwanvnqglqgtardilttywQhvinhlesdnhdykihqlllarikkvmkadpevkmisaeapilfakgcdvfiteltmrawihaednkrrtlqrsdiaaalsksdmfdflidivpr >6y42_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF RSRR COMPLEXED TO A 39 BASEPAIR DNA FRAGMENT OF THE RSRR PROMOTER organism=? DNA sequence DC(F3):DG(E37) DA(F4):DT(E36) DT(F5):DA(E35) DT(F6):DA(E34) DT(F7):DA(E33) DG(F8):DC(E32) DA(F9):DT(E31) DC(F10):DG(E30) DT(F11):DA(E29) DC(F12):DG(E28) DG(F13):DC(E27) DG(F14):DC(E26) DA(F15):DT(E25) DC(F16):DG(E24) DA(F17):DT(E23) DC(F18):DG(E22) DA(F19):DT(E21) DG(F20):DC(E20) DA(F21):DT(E19) DC(F22):DG(E18) DT(F23):DA(E17) DA(F24):DT(E16) DT(F25):DA(E15) DC(F26):DG(E14) DC(F27):DG(E13) DG(F28):DC(E12) DA(F29):DT(E11) DG(F30):DC(E10) DT(F31):DA(E9) DA(F32):DT(E8) DT(F33):DA(E7) DT(F34):DA(E6) DA(F35):DT(E5) DT(F36):DA(E4) DC(F37):DG(E3) DT(F38):DA(E2) chainA ( 37) SER38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) TYR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) LYS42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLN57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 2 0 0 0 0 0 0 0 0 ( 58) LYS59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 chainB ( 37) SER38 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) TYR39 0 0 0 0 0 0 0 0 0 0 0 0 3 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) LYS42 0 0 0 0 0 0 0 0 0 0 0 0 4 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN45 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLN57 0 0 0 0 0 0 0 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klsggvewalhccvvltaasrpvpaarlaelhdvspSYlaKqmQalsraglvrsvQgKtggyvltrpaveitlldvvqavdgpdpafvcteirqrgplatppekctkacpiaramgaaeaawraslaattiadlvatvddesgpdalpgvgawlieglg/klsggvewalhccvvltaasrpvpaarlaelhdvspSYlaKqmQalsRaglvrsvQgktggyvltrpaveitlldvvqavdgpdpafvcteirqrgplatppekctkacpiaramgaaeaawraslaattiadlvatvddesgpdalpgvgawlieglg >6y42_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF RSRR COMPLEXED TO A 39 BASEPAIR DNA FRAGMENT OF THE RSRR PROMOTER organism=? DNA sequence DC(F3):DG(E37) DA(F4):DT(E36) DT(F5):DA(E35) DT(F6):DA(E34) DT(F7):DA(E33) DG(F8):DC(E32) DA(F9):DT(E31) DC(F10):DG(E30) DT(F11):DA(E29) DC(F12):DG(E28) DG(F13):DC(E27) DG(F14):DC(E26) DA(F15):DT(E25) DC(F16):DG(E24) DA(F17):DT(E23) DC(F18):DG(E22) DA(F19):DT(E21) DG(F20):DC(E20) DA(F21):DT(E19) DC(F22):DG(E18) DT(F23):DA(E17) DA(F24):DT(E16) DT(F25):DA(E15) DC(F26):DG(E14) DC(F27):DG(E13) DG(F28):DC(E12) DA(F29):DT(E11) DG(F30):DC(E10) DT(F31):DA(E9) DA(F32):DT(E8) DT(F33):DA(E7) DT(F34):DA(E6) DA(F35):DT(E5) DT(F36):DA(E4) DC(F37):DG(E3) DT(F38):DA(E2) chainB ( 37) SER38 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) TYR39 0 0 0 0 0 0 0 0 0 0 0 0 3 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) LYS42 0 0 0 0 0 0 0 0 0 0 0 0 4 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLN45 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG49 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLN57 0 0 0 0 0 0 0 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klsggvewalhccvvltaasrpvpaarlaelhdvspSYlaKqmQalsRaglvrsvQgktggyvltrpaveitlldvvqavdgpdpafvcteirqrgplatppekctkacpiaramgaaeaawraslaattiadlvatvddesgpdalpgvgawlieglg >6y5d_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF HUMAN CGAS (K394E) BOUND TO THE NUCLEOSOME organism=HOMO SAPIENS DNA sequence DA(J1):DT(I153) DT(J2):DA(I152) DC(J3):DG(I151) DA(J4):DT(I150) DC(J5):DG(I149) DA(J6):DT(I148) DG(J7):DC(I147) DG(J8):DC(I146) DA(J9):DT(I145) DT(J10):DA(I144) DG(J11):DC(I143) DT(J12):DA(I142) DA(J13):DT(I141) DT(J14):DA(I140) DA(J15):DT(I139) DT(J16):DA(I138) DA(J17):DT(I137) DT(J18):DA(I136) DC(J19):DG(I135) DT(J20):DA(I134) DG(J21):DC(I133) DA(J22):DT(I132) DC(J23):DG(I131) DA(J24):DT(I130) DC(J25):DG(I129) DG(J26):DC(I128) DT(J27):DA(I127) DG(J28):DC(I126) DC(J29):DG(I125) DC(J30):DG(I124) DT(J31):DA(I123) DG(J32):DC(I122) DG(J33):DC(I121) DA(J34):DT(I120) DG(J35):DC(I119) DA(J36):DT(I118) DC(J37):DG(I117) DT(J38):DA(I116) DA(J39):DT(I115) DG(J40):DC(I114) DG(J41):DC(I113) DG(J42):DC(I112) DA(J43):DT(I111) DG(J44):DC(I110) DT(J45):DA(I109) DA(J46):DT(I108) DA(J47):DT(I107) DT(J48):DA(I106) DC(J49):DG(I105) DC(J50):DG(I104) DC(J51):DG(I103) DC(J52):DG(I102) DT(J53):DA(I101) DT(J54):DA(I100) DG(J55):DC(I99) DG(J56):DC(I98) DC(J57):DG(I97) DG(J58):DC(I96) DG(J59):DC(I95) DT(J60):DA(I94) DT(J61):DA(I93) DA(J62):DT(I92) DA(J63):DT(I91) DA(J64):DT(I90) DA(J65):DT(I89) DC(J66):DG(I88) DG(J67):DC(I87) DC(J68):DG(I86) DG(J69):DC(I85) DG(J70):DC(I84) DG(J71):DC(I83) DG(J72):DC(I82) DG(J73):DC(I81) DA(J74):DT(I80) DC(J75):DG(I79) DA(J76):DT(I78) DG(J77):DC(I77) DC(J78):DG(I76) DG(J79):DC(I75) DC(J80):DG(I74) DG(J81):DC(I73) DT(J82):DA(I72) DA(J83):DT(I71) DC(J84):DG(I70) DG(J85):DC(I69) DT(J86):DA(I68) DG(J87):DC(I67) DC(J88):DG(I66) DG(J89):DC(I65) DT(J90):DA(I64) DT(J91):DA(I63) DT(J92):DA(I62) DA(J93):DT(I61) DA(J94):DT(I60) DG(J95):DC(I59) DC(J96):DG(I58) DG(J97):DC(I57) DG(J98):DC(I56) DT(J99):DA(I55) DG(J100):DC(I54) DC(J101):DG(I53) DT(J102):DA(I52) DA(J103):DT(I51) DG(J104):DC(I50) DA(J105):DT(I49) DG(J106):DC(I48) DC(J107):DG(I47) DT(J108):DA(I46) DG(J109):DC(I45) DT(J110):DA(I44) DC(J111):DG(I43) DT(J112):DA(I42) DA(J113):DT(I41) DC(J114):DG(I40) DG(J115):DC(I39) DA(J116):DT(I38) DC(J117):DG(I37) DC(J118):DG(I36) DA(J119):DT(I35) DA(J120):DT(I34) DT(J121):DA(I33) DT(J122):DA(I32) DG(J123):DC(I31) DA(J124):DT(I30) DG(J125):DC(I29) DC(J126):DG(I28) DG(J127):DC(I27) DG(J128):DC(I26) DC(J129):DG(I25) DC(J130):DG(I24) DT(J131):DA(I23) DC(J132):DG(I22) DG(J133):DC(I21) DG(J134):DC(I20) DC(J135):DG(I19) DA(J136):DT(I18) DC(J137):DG(I17) DC(J138):DG(I16) DG(J139):DC(I15) DG(J140):DC(I14) DG(J141):DC(I13) DA(J142):DT(I12) DT(J143):DA(I11) DT(J144):DA(I10) DC(J145):DG(I9) DT(J146):DA(I8) DC(J147):DG(I7) DC(J148):DG(I6) DA(J149):DT(I5) DG(J150):DC(I4) DG(J151):DC(I3) DA(J152):DT(I2) DT(J153):DA(I1) chainA ( 3) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR42 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 3) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 46) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/lrDNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/sRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/kVLRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaksrssraglqfpvgrvhrllrkgnyaervgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6y5d_H:Histone-fold; title=STRUCTURE OF HUMAN CGAS (K394E) BOUND TO THE NUCLEOSOME organism=? DNA sequence DA(I1):DT(J153) DT(I2):DA(J152) DC(I3):DG(J151) DC(I4):DG(J150) DT(I5):DA(J149) DG(I6):DC(J148) DG(I7):DC(J147) DA(I8):DT(J146) DG(I9):DC(J145) DA(I10):DT(J144) DA(I11):DT(J143) DT(I12):DA(J142) DC(I13):DG(J141) DC(I14):DG(J140) DC(I15):DG(J139) DG(I16):DC(J138) DG(I17):DC(J137) DT(I18):DA(J136) DG(I19):DC(J135) DC(I20):DG(J134) DC(I21):DG(J133) DG(I22):DC(J132) DA(I23):DT(J131) DG(I24):DC(J130) DG(I25):DC(J129) DC(I26):DG(J128) DC(I27):DG(J127) DG(I28):DC(J126) DC(I29):DG(J125) DT(I30):DA(J124) DC(I31):DG(J123) DA(I32):DT(J122) DA(I33):DT(J121) DT(I34):DA(J120) DT(I35):DA(J119) DG(I36):DC(J118) DG(I37):DC(J117) DT(I38):DA(J116) DC(I39):DG(J115) DG(I40):DC(J114) DT(I41):DA(J113) DA(I42):DT(J112) DG(I43):DC(J111) DA(I44):DT(J110) DC(I45):DG(J109) DA(I46):DT(J108) DG(I47):DC(J107) DC(I48):DG(J106) DT(I49):DA(J105) DC(I50):DG(J104) DT(I51):DA(J103) DA(I52):DT(J102) DG(I53):DC(J101) DC(I54):DG(J100) DA(I55):DT(J99) DC(I56):DG(J98) DC(I57):DG(J97) DG(I58):DC(J96) DC(I59):DG(J95) DT(I60):DA(J94) DT(I61):DA(J93) DA(I62):DT(J92) DA(I63):DT(J91) DA(I64):DT(J90) DC(I65):DG(J89) DG(I66):DC(J88) DC(I67):DG(J87) DA(I68):DT(J86) DC(I69):DG(J85) DG(I70):DC(J84) DT(I71):DA(J83) DA(I72):DT(J82) DC(I73):DG(J81) DG(I74):DC(J80) DC(I75):DG(J79) DG(I76):DC(J78) DC(I77):DG(J77) DT(I78):DA(J76) DG(I79):DC(J75) DT(I80):DA(J74) DC(I81):DG(J73) DC(I82):DG(J72) DC(I83):DG(J71) DC(I84):DG(J70) DC(I85):DG(J69) DG(I86):DC(J68) DC(I87):DG(J67) DG(I88):DC(J66) DT(I89):DA(J65) DT(I90):DA(J64) DT(I91):DA(J63) DT(I92):DA(J62) DA(I93):DT(J61) DA(I94):DT(J60) DC(I95):DG(J59) DC(I96):DG(J58) DG(I97):DC(J57) DC(I98):DG(J56) DC(I99):DG(J55) DA(I100):DT(J54) DA(I101):DT(J53) DG(I102):DC(J52) DG(I103):DC(J51) DG(I104):DC(J50) DG(I105):DC(J49) DA(I106):DT(J48) DT(I107):DA(J47) DT(I108):DA(J46) DA(I109):DT(J45) DC(I110):DG(J44) DT(I111):DA(J43) DC(I112):DG(J42) DC(I113):DG(J41) DC(I114):DG(J40) DT(I115):DA(J39) DA(I116):DT(J38) DG(I117):DC(J37) DT(I118):DA(J36) DC(I119):DG(J35) DT(I120):DA(J34) DC(I121):DG(J33) DC(I122):DG(J32) DA(I123):DT(J31) DG(I124):DC(J30) DG(I125):DC(J29) DC(I126):DG(J28) DA(I127):DT(J27) DC(I128):DG(J26) DG(I129):DC(J25) DT(I130):DA(J24) DG(I131):DC(J23) DT(I132):DA(J22) DC(I133):DG(J21) DA(I134):DT(J20) DG(I135):DC(J19) DA(I136):DT(J18) DT(I137):DA(J17) DA(I138):DT(J16) DT(I139):DA(J15) DA(I140):DT(J14) DT(I141):DA(J13) DA(I142):DT(J12) DC(I143):DG(J11) DA(I144):DT(J10) DT(I145):DA(J9) DC(I146):DG(J8) DC(I147):DG(J7) DT(I148):DA(J6) DG(I149):DC(J5) DT(I150):DA(J4) DG(I151):DC(J3) DA(I152):DT(J2) DT(I153):DA(J1) chainH ( 3) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6y5d_Q:Histone-fold; title=STRUCTURE OF HUMAN CGAS (K394E) BOUND TO THE NUCLEOSOME organism=HOMO SAPIENS DNA sequence DA(U1):DT(V153) DT(U2):DA(V152) DC(U3):DG(V151) DC(U4):DG(V150) DT(U5):DA(V149) DG(U6):DC(V148) DG(U7):DC(V147) DA(U8):DT(V146) DG(U9):DC(V145) DA(U10):DT(V144) DA(U11):DT(V143) DT(U12):DA(V142) DC(U13):DG(V141) DC(U14):DG(V140) DC(U15):DG(V139) DG(U16):DC(V138) DG(U17):DC(V137) DT(U18):DA(V136) DG(U19):DC(V135) DC(U20):DG(V134) DC(U21):DG(V133) DG(U22):DC(V132) DA(U23):DT(V131) DG(U24):DC(V130) DG(U25):DC(V129) DC(U26):DG(V128) DC(U27):DG(V127) DG(U28):DC(V126) DC(U29):DG(V125) DT(U30):DA(V124) DC(U31):DG(V123) DA(U32):DT(V122) DA(U33):DT(V121) DT(U34):DA(V120) DT(U35):DA(V119) DG(U36):DC(V118) DG(U37):DC(V117) DT(U38):DA(V116) DC(U39):DG(V115) DG(U40):DC(V114) DT(U41):DA(V113) DA(U42):DT(V112) DG(U43):DC(V111) DA(U44):DT(V110) DC(U45):DG(V109) DA(U46):DT(V108) DG(U47):DC(V107) DC(U48):DG(V106) DT(U49):DA(V105) DC(U50):DG(V104) DT(U51):DA(V103) DA(U52):DT(V102) DG(U53):DC(V101) DC(U54):DG(V100) DA(U55):DT(V99) DC(U56):DG(V98) DC(U57):DG(V97) DG(U58):DC(V96) DC(U59):DG(V95) DT(U60):DA(V94) DT(U61):DA(V93) DA(U62):DT(V92) DA(U63):DT(V91) DA(U64):DT(V90) DC(U65):DG(V89) DG(U66):DC(V88) DC(U67):DG(V87) DA(U68):DT(V86) DC(U69):DG(V85) DG(U70):DC(V84) DT(U71):DA(V83) DA(U72):DT(V82) DC(U73):DG(V81) DG(U74):DC(V80) DC(U75):DG(V79) DG(U76):DC(V78) DC(U77):DG(V77) DT(U78):DA(V76) DG(U79):DC(V75) DT(U80):DA(V74) DC(U81):DG(V73) DC(U82):DG(V72) DC(U83):DG(V71) DC(U84):DG(V70) DC(U85):DG(V69) DG(U86):DC(V68) DC(U87):DG(V67) DG(U88):DC(V66) DT(U89):DA(V65) DT(U90):DA(V64) DT(U91):DA(V63) DT(U92):DA(V62) DA(U93):DT(V61) DA(U94):DT(V60) DC(U95):DG(V59) DC(U96):DG(V58) DG(U97):DC(V57) DC(U98):DG(V56) DC(U99):DG(V55) DA(U100):DT(V54) DA(U101):DT(V53) DG(U102):DC(V52) DG(U103):DC(V51) DG(U104):DC(V50) DG(U105):DC(V49) DA(U106):DT(V48) DT(U107):DA(V47) DT(U108):DA(V46) DA(U109):DT(V45) DC(U110):DG(V44) DT(U111):DA(V43) DC(U112):DG(V42) DC(U113):DG(V41) DC(U114):DG(V40) DT(U115):DA(V39) DA(U116):DT(V38) DG(U117):DC(V37) DT(U118):DA(V36) DC(U119):DG(V35) DT(U120):DA(V34) DC(U121):DG(V33) DC(U122):DG(V32) DA(U123):DT(V31) DG(U124):DC(V30) DG(U125):DC(V29) DC(U126):DG(V28) DA(U127):DT(V27) DC(U128):DG(V26) DG(U129):DC(V25) DT(U130):DA(V24) DG(U131):DC(V23) DT(U132):DA(V22) DC(U133):DG(V21) DA(U134):DT(V20) DG(U135):DC(V19) DA(U136):DT(V18) DT(U137):DA(V17) DA(U138):DT(V16) DT(U139):DA(V15) DA(U140):DT(V14) DT(U141):DA(V13) DA(U142):DT(V12) DC(U143):DG(V11) DA(U144):DT(V10) DT(U145):DA(V9) DC(U146):DG(V8) DC(U147):DG(V7) DT(U148):DA(V6) DG(U149):DC(V5) DT(U150):DA(V4) DG(U151):DC(V3) DA(U152):DT(V2) DT(U153):DA(V1) chainQ ( 1) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge >6y5e_A:Histone-fold; title=STRUCTURE OF HUMAN CGAS (K394E) BOUND TO THE NUCLEOSOME (FOCUSED REFINEMENT OF CGAS-NCP SUBCOMPLEX) organism=HOMO SAPIENS DNA sequence DA(I1):DT(J153) DT(I2):DA(J152) DC(I3):DG(J151) DC(I4):DG(J150) DT(I5):DA(J149) DG(I6):DC(J148) DG(I7):DC(J147) DA(I8):DT(J146) DG(I9):DC(J145) DA(I10):DT(J144) DA(I11):DT(J143) DT(I12):DA(J142) DC(I13):DG(J141) DC(I14):DG(J140) DC(I15):DG(J139) DG(I16):DC(J138) DG(I17):DC(J137) DT(I18):DA(J136) DG(I19):DC(J135) DC(I20):DG(J134) DC(I21):DG(J133) DG(I22):DC(J132) DA(I23):DT(J131) DG(I24):DC(J130) DG(I25):DC(J129) DC(I26):DG(J128) DC(I27):DG(J127) DG(I28):DC(J126) DC(I29):DG(J125) DT(I30):DA(J124) DC(I31):DG(J123) DA(I32):DT(J122) DA(I33):DT(J121) DT(I34):DA(J120) DT(I35):DA(J119) DG(I36):DC(J118) DG(I37):DC(J117) DT(I38):DA(J116) DC(I39):DG(J115) DG(I40):DC(J114) DT(I41):DA(J113) DA(I42):DT(J112) DG(I43):DC(J111) DA(I44):DT(J110) DC(I45):DG(J109) DA(I46):DT(J108) DG(I47):DC(J107) DC(I48):DG(J106) DT(I49):DA(J105) DC(I50):DG(J104) DT(I51):DA(J103) DA(I52):DT(J102) DG(I53):DC(J101) DC(I54):DG(J100) DA(I55):DT(J99) DC(I56):DG(J98) DC(I57):DG(J97) DG(I58):DC(J96) DC(I59):DG(J95) DT(I60):DA(J94) DT(I61):DA(J93) DA(I62):DT(J92) DA(I63):DT(J91) DA(I64):DT(J90) DC(I65):DG(J89) DG(I66):DC(J88) DC(I67):DG(J87) DA(I68):DT(J86) DC(I69):DG(J85) DG(I70):DC(J84) DT(I71):DA(J83) DA(I72):DT(J82) DC(I73):DG(J81) DG(I74):DC(J80) DC(I75):DG(J79) DG(I76):DC(J78) DC(I77):DG(J77) DT(I78):DA(J76) DG(I79):DC(J75) DT(I80):DA(J74) DC(I81):DG(J73) DC(I82):DG(J72) DC(I83):DG(J71) DC(I84):DG(J70) DC(I85):DG(J69) DG(I86):DC(J68) DC(I87):DG(J67) DG(I88):DC(J66) DT(I89):DA(J65) DT(I90):DA(J64) DT(I91):DA(J63) DT(I92):DA(J62) DA(I93):DT(J61) DA(I94):DT(J60) DC(I95):DG(J59) DC(I96):DG(J58) DG(I97):DC(J57) DC(I98):DG(J56) DC(I99):DG(J55) DA(I100):DT(J54) DA(I101):DT(J53) DG(I102):DC(J52) DG(I103):DC(J51) DG(I104):DC(J50) DG(I105):DC(J49) DA(I106):DT(J48) DT(I107):DA(J47) DT(I108):DA(J46) DA(I109):DT(J45) DC(I110):DG(J44) DT(I111):DA(J43) DC(I112):DG(J42) DC(I113):DG(J41) DC(I114):DG(J40) DT(I115):DA(J39) DA(I116):DT(J38) DG(I117):DC(J37) DT(I118):DA(J36) DC(I119):DG(J35) DT(I120):DA(J34) DC(I121):DG(J33) DC(I122):DG(J32) DA(I123):DT(J31) DG(I124):DC(J30) DG(I125):DC(J29) DC(I126):DG(J28) DA(I127):DT(J27) DC(I128):DG(J26) DG(I129):DC(J25) DT(I130):DA(J24) DG(I131):DC(J23) DT(I132):DA(J22) DC(I133):DG(J21) DA(I134):DT(J20) DG(I135):DC(J19) DA(I136):DT(J18) DT(I137):DA(J17) DA(I138):DT(J16) DT(I139):DA(J15) DA(I140):DT(J14) DT(I141):DA(J13) DA(I142):DT(J12) DC(I143):DG(J11) DA(I144):DT(J10) DT(I145):DA(J9) DC(I146):DG(J8) DC(I147):DG(J7) DT(I148):DA(J6) DG(I149):DC(J5) DT(I150):DA(J4) DG(I151):DC(J3) DA(I152):DT(J2) DT(I153):DA(J1) chainA ( 2) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 3) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge >6y5e_ABCDEFGH: title=STRUCTURE OF HUMAN CGAS (K394E) BOUND TO THE NUCLEOSOME (FOCUSED REFINEMENT OF CGAS-NCP SUBCOMPLEX) organism=HOMO SAPIENS DNA sequence DA(J1):DT(I153) DT(J2):DA(I152) DC(J3):DG(I151) DA(J4):DT(I150) DC(J5):DG(I149) DA(J6):DT(I148) DG(J7):DC(I147) DG(J8):DC(I146) DA(J9):DT(I145) DT(J10):DA(I144) DG(J11):DC(I143) DT(J12):DA(I142) DA(J13):DT(I141) DT(J14):DA(I140) DA(J15):DT(I139) DT(J16):DA(I138) DA(J17):DT(I137) DT(J18):DA(I136) DC(J19):DG(I135) DT(J20):DA(I134) DG(J21):DC(I133) DA(J22):DT(I132) DC(J23):DG(I131) DA(J24):DT(I130) DC(J25):DG(I129) DG(J26):DC(I128) DT(J27):DA(I127) DG(J28):DC(I126) DC(J29):DG(I125) DC(J30):DG(I124) DT(J31):DA(I123) DG(J32):DC(I122) DG(J33):DC(I121) DA(J34):DT(I120) DG(J35):DC(I119) DA(J36):DT(I118) DC(J37):DG(I117) DT(J38):DA(I116) DA(J39):DT(I115) DG(J40):DC(I114) DG(J41):DC(I113) DG(J42):DC(I112) DA(J43):DT(I111) DG(J44):DC(I110) DT(J45):DA(I109) DA(J46):DT(I108) DA(J47):DT(I107) DT(J48):DA(I106) DC(J49):DG(I105) DC(J50):DG(I104) DC(J51):DG(I103) DC(J52):DG(I102) DT(J53):DA(I101) DT(J54):DA(I100) DG(J55):DC(I99) DG(J56):DC(I98) DC(J57):DG(I97) DG(J58):DC(I96) DG(J59):DC(I95) DT(J60):DA(I94) DT(J61):DA(I93) DA(J62):DT(I92) DA(J63):DT(I91) DA(J64):DT(I90) DA(J65):DT(I89) DC(J66):DG(I88) DG(J67):DC(I87) DC(J68):DG(I86) DG(J69):DC(I85) DG(J70):DC(I84) DG(J71):DC(I83) DG(J72):DC(I82) DG(J73):DC(I81) DA(J74):DT(I80) DC(J75):DG(I79) DA(J76):DT(I78) DG(J77):DC(I77) DC(J78):DG(I76) DG(J79):DC(I75) DC(J80):DG(I74) DG(J81):DC(I73) DT(J82):DA(I72) DA(J83):DT(I71) DC(J84):DG(I70) DG(J85):DC(I69) DT(J86):DA(I68) DG(J87):DC(I67) DC(J88):DG(I66) DG(J89):DC(I65) DT(J90):DA(I64) DT(J91):DA(I63) DT(J92):DA(I62) DA(J93):DT(I61) DA(J94):DT(I60) DG(J95):DC(I59) DC(J96):DG(I58) DG(J97):DC(I57) DG(J98):DC(I56) DT(J99):DA(I55) DG(J100):DC(I54) DC(J101):DG(I53) DT(J102):DA(I52) DA(J103):DT(I51) DG(J104):DC(I50) DA(J105):DT(I49) DG(J106):DC(I48) DC(J107):DG(I47) DT(J108):DA(I46) DG(J109):DC(I45) DT(J110):DA(I44) DC(J111):DG(I43) DT(J112):DA(I42) DA(J113):DT(I41) DC(J114):DG(I40) DG(J115):DC(I39) DA(J116):DT(I38) DC(J117):DG(I37) DC(J118):DG(I36) DA(J119):DT(I35) DA(J120):DT(I34) DT(J121):DA(I33) DT(J122):DA(I32) DG(J123):DC(I31) DA(J124):DT(I30) DG(J125):DC(I29) DC(J126):DG(I28) DG(J127):DC(I27) DG(J128):DC(I26) DC(J129):DG(I25) DC(J130):DG(I24) DT(J131):DA(I23) DC(J132):DG(I22) DG(J133):DC(I21) DG(J134):DC(I20) DC(J135):DG(I19) DA(J136):DT(I18) DC(J137):DG(I17) DC(J138):DG(I16) DG(J139):DC(I15) DG(J140):DC(I14) DG(J141):DC(I13) DA(J142):DT(I12) DT(J143):DA(I11) DT(J144):DA(I10) DC(J145):DG(I9) DT(J146):DA(I8) DC(J147):DG(I7) DC(J148):DG(I6) DA(J149):DT(I5) DG(J150):DC(I4) DG(J151):DC(I3) DA(J152):DT(I2) DT(J153):DA(I1) chainA ( 2) HIS40 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR42 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 46) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/lRDNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaksrssraglqfpvgrvhrllrkgnyaervgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/Srkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/kvLRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaksrssraglqfpvgrvhrllrkgnyaervgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >6y93_AB:KorB_DNA-binding_domain-like; title=CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF THE NUCLEOID OCCLUSION FACTOR (NOC) COMPLEXED TO THE NOC-BINDING SITE (NBS) organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DG(D1):DC(C22) DG(D2):DC(C21) DA(D3):DT(C20) DT(D4):DA(C19) DA(D5):DT(C18) DT(D6):DA(C17) DT(D7):DA(C16) DT(D8):DA(C15) DC(D9):DG(C14) DC(D10):DG(C13) DC(D11):DG(C12) DG(D12):DC(C11) DG(D13):DC(C10) DG(D14):DC(C9) DA(D15):DT(C8) DA(D16):DT(C7) DA(D17):DT(C6) DT(D18):DA(C5) DA(D19):DT(C4) DT(D20):DA(C3) DC(D21):DG(C2) DC(D22):DG(C1) chainA ( 33) GLN158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 14 0 0 0 ( 34) SER159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 4 0 0 0 0 0 ( 35) THR160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 37) ALA162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 38) ASN163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 10 0 0 0 0 0 ( 41) ARG166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 ( 61) ARG186 0 0 0 0 0 0 0 0 0 0 0 2 15 19 0 0 0 0 0 0 0 0 ( 64) ARG189 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 1 0 0 0 0 0 0 ( 93) GLU218 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainB ( 46) GLN158 0 0 0 14 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) SER159 0 0 0 0 0 4 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) THR160 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ALA162 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN163 0 0 0 0 0 10 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG166 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG186 0 0 0 0 0 0 0 0 18 16 3 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG189 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence elssieeahayarllelhdltqealaqrlgkgQSTiANklRllklpqpvqeaimekkiteRhaRaliplkqpelqvtllteiiekslnvkqtEdrvvkmleqgqr/tasvalienlqreelssieeahayarllelhdltqealaqrlgkgQSTiANklRllklpqpvqeaimekkiteRhaRaliplkqpelqvtllteiiekslnvkqtedrvvkmleqg >6y93_B:KorB_DNA-binding_domain-like; title=CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF THE NUCLEOID OCCLUSION FACTOR (NOC) COMPLEXED TO THE NOC-BINDING SITE (NBS) organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DG(C1):DC(D22) DG(C2):DC(D21) DA(C3):DT(D20) DT(C4):DA(D19) DA(C5):DT(D18) DT(C6):DA(D17) DT(C7):DA(D16) DT(C8):DA(D15) DC(C9):DG(D14) DC(C10):DG(D13) DC(C11):DG(D12) DG(C12):DC(D11) DG(C13):DC(D10) DG(C14):DC(D9) DA(C15):DT(D8) DA(C16):DT(D7) DA(C17):DT(D6) DT(C18):DA(D5) DA(C19):DT(D4) DT(C20):DA(D3) DC(C21):DG(D2) DC(C22):DG(D1) chainB ( 46) GLN158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 14 0 0 0 ( 47) SER159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 4 0 0 0 0 0 ( 48) THR160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 50) ALA162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 51) ASN163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 10 0 0 0 0 0 ( 54) ARG166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 ( 74) ARG186 0 0 0 0 0 0 0 0 0 0 0 3 16 18 0 0 0 0 0 0 0 0 ( 77) ARG189 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 prot.sequence tasvalienlqreelssieeahayarllelhdltqealaqrlgkgQSTiANklRllklpqpvqeaimekkiteRhaRaliplkqpelqvtllteiiekslnvkqtedrvvkmleqg >6ycq_A:DNA-binding_pseudobarrel_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF ARABIDOPSIS THALIANA AUXIN RESPONSE FACTOR 1 (ATARF1) IN COMPLEX WITH HIGH AFFINITY DNA organism=Arabidopsis thaliana DNA sequence DT(C1):DA(D21) DT(C2):DA(D20) DG(C3):DC(D19) DT(C4):DA(D18) DC(C5):DG(D17) DG(C6):DC(D16) DG(C7):DC(D15) DC(C8):DG(D14) DC(C9):DG(D13) DT(C10):DA(D12) DT(C11):DA(D11) DT(C12):DA(D10) DG(C13):DC(D9) DG(C14):DC(D8) DC(C15):DG(D7) DC(C16):DG(D6) DG(C17):DC(D5) DA(C18):DT(D4) DC(C19):DG(D3) DA(C20):DT(D2) DA(C21):DT(D1) chainA (123) SER131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (128) HIS136 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 11 6 0 0 0 0 (173) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 (176) PRO184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 (178) ARG186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 17 0 prot.sequence gkpggvlsdalcrelwhacagplvtlpregervyyfpeghmeqleasmhqgleqqmpsfnlpskilckviniqrraepetdevyaqitllpeldqseptspdapvqepekctvhsfcktltaSdtstHggfsvlrrhaddclppldmsqqppwqelvatdlhnsewhfrhifRgqPrRhllttgwsvfvsskklvagdafiflrgeneelrvgvrrhmrqqtnipssvisshsmhigvlataahaittgtifsvfykprtsrsefivsvnryleaktqklsvgmrfkmrfegeeapekrfsgtivgvqenkssvwhdsewrslkvqwdepssvfrpervspwelepl >6ycq_AB:DNA-binding_pseudobarrel_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF ARABIDOPSIS THALIANA AUXIN RESPONSE FACTOR 1 (ATARF1) IN COMPLEX WITH HIGH AFFINITY DNA organism=Arabidopsis thaliana DNA sequence DT(C1):DA(D21) DT(C2):DA(D20) DG(C3):DC(D19) DT(C4):DA(D18) DC(C5):DG(D17) DG(C6):DC(D16) DG(C7):DC(D15) DC(C8):DG(D14) DC(C9):DG(D13) DT(C10):DA(D12) DT(C11):DA(D11) DT(C12):DA(D10) DG(C13):DC(D9) DG(C14):DC(D8) DC(C15):DG(D7) DC(C16):DG(D6) DG(C17):DC(D5) DA(C18):DT(D4) DC(C19):DG(D3) DA(C20):DT(D2) DA(C21):DT(D1) chainA (123) SER131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (128) HIS136 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 11 6 0 0 0 0 (173) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 (176) PRO184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 (178) ARG186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 17 0 chainB (119) SER131 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) HIS136 0 0 0 0 6 10 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ARG181 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) PRO184 5 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG186 0 17 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gkpggvlsdalcrelwhacagplvtlpregervyyfpeghmeqleasmhqgleqqmpsfnlpskilckviniqrraepetdevyaqitllpeldqseptspdapvqepekctvhsfcktltaSdtstHggfsvlrrhaddclppldmsqqppwqelvatdlhnsewhfrhifRgqPrRhllttgwsvfvsskklvagdafiflrgeneelrvgvrrhmrqqtnipssvisshsmhigvlataahaittgtifsvfykprtsrsefivsvnryleaktqklsvgmrfkmrfegeeapekrfsgtivgvqenkssvwhdsewrslkvqwdepssvfrpervspwelepl/gvlsdalcrelwhacagplvtlpregervyyfpeghmeqleasmhqgleqqmpsfnlpskilckviniqrraepetdevyaqitllpeldqseptspdapvqepekctvhsfcktltaSdtstHggfsvlrrhaddclppldmsqqppwqelvatdlhnsewhfrhifRgqPrRhllttgwsvfvsskklvagdafiflrgeneelrvgvrrhmrqqtnipssvisshsmhigvlataahaittgtifsvfykprtsrsefivsvnryleaktqklsvgmrfkmrfegeeapekrfsgtivgvqenkssvwhdsewrslkvqwdepssvfrpervspwelepl >6yl2_A:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURAL AND DNA BINDING STUDIES OF THE TRANSCRIPTIONAL REPRESSOR RV2506 (BKAR) FROM MYCOBACTERIUM TUBERCULOSIS SUPPORTS A ROLE IN L- LEUCINE CATABOLISM organism=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) DNA sequence DC(H1):DG(G20) DG(H2):DC(G19) DG(H3):DC(G18) DT(H4):DA(G17) DT(H5):DA(G16) DA(H6):DT(G15) DA(H7):DT(G14) DT(H8):DA(G13) DC(H9):DG(G12) DG(H10):DC(G11) DT(H11):DA(G10) DC(H12):DG(G9) DA(H13):DT(G8) DT(H14):DA(G7) DT(H15):DA(G6) DA(H16):DT(G5) DA(H17):DT(G4) DC(H18):DG(G3) DG(H19):DC(G2) DT(H20):DA(G1) chainA ( 37) PRO60 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR63 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG64 0 21 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdrrfqllaaaerlfaergflavrledigaaagvsgPaiYRhfpnkesllvellvgvsarllagardvttrsanlaaaldgliefhldfalgeadliriqdrdlahlpavaerqvrkaqrqyvevwvgvlrelnpglaeadarlmahavfgllnstphsmkaadskpartvraravlramtvaalsaadrcl >6yl2_AB:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURAL AND DNA BINDING STUDIES OF THE TRANSCRIPTIONAL REPRESSOR RV2506 (BKAR) FROM MYCOBACTERIUM TUBERCULOSIS SUPPORTS A ROLE IN L- LEUCINE CATABOLISM organism=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) / Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) DNA sequence DC(H1):DG(G20) DG(H2):DC(G19) DG(H3):DC(G18) DT(H4):DA(G17) DT(H5):DA(G16) DA(H6):DT(G15) DA(H7):DT(G14) DT(H8):DA(G13) DC(H9):DG(G12) DG(H10):DC(G11) DT(H11):DA(G10) DC(H12):DG(G9) DA(H13):DT(G8) DT(H14):DA(G7) DT(H15):DA(G6) DA(H16):DT(G5) DA(H17):DT(G4) DC(H18):DG(G3) DG(H19):DC(G2) DT(H20):DA(G1) chainB ( 25) LEU48 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 37) PRO60 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 ( 38) ALA61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 40) TYR63 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 ( 41) ARG64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 10 0 chainA ( 37) PRO60 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR63 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG64 0 21 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdrrfqllaaaerlfaergflavrledigaaagvsgPaiYRhfpnkesllvellvgvsarllagardvttrsanlaaaldgliefhldfalgeadliriqdrdlahlpavaerqvrkaqrqyvevwvgvlrelnpglaeadarlmahavfgllnstphsmkaadskpartvraravlramtvaalsaadrcl/sdrrfqllaaaerlfaergflavrLedigaaagvsgPAiYRhfpnkesllvellvgvsarllagardvttrsanlaaaldgliefhldfalgeadliriqdrdlahlpavaerqvrkaqrqyvevwvgvlrelnpglaeadarlmahavfgllnstphsmkaadskpartvraravlramtvaalsaadrcl >6ymg_A: title=VCAM4I RESTRICTION ENDONUCLEASE IN COMPLEX WITH 5MC-MODIFIED DSDNA organism=VIBRIO CAMPBELLII DNA sequence DC(C1):DG(D11) DC(C2):DG(D10) DA(C3):DT(D9) DT(C4):DA(D8) DG(C5):DC(D7) DG(C7):DC(D5) DC(C8):DG(D4) DT(C9):DA(D3) DG(C10):DC(D2) chainA ( 9) LYS9 0 0 0 0 0 0 3 2 0 (128) GLN128 0 0 0 0 34 26 0 0 0 prot.sequence mnywwvsqKqtfkqefeggymwspkenkngtqshyynnmtlvqpgdvvfsfanglilsvgiarshaysynkptefgvagadwandgwkidleyhlvenkirpkahidfirpylpqkysplqdngngnQaylfsvphelaskvveligseaeevifgfadtteitttadaiecqisndasidetekhqlvksrrgqgifrsrleqvesrcrvtgvqlknhliashikpwavsnnqerldghnglllaphvdhlfdkgfisfedngemivseklnldvlkawsisqgnygyfskqqqeymcyhrenvfkkl >6ymv_A:DNA/RNA_polymerases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE PARTIALLY- MELTED TRANSCRIPTION INITIATION COMPLEX (PMIC) organism=? DNA sequence DA(N103):DT(T39) DA(N104):DT(T38) DT(N105):DA(T37) DA(N106):DT(T36) DA(N107):DT(T35) DG(N108):DC(T34) DT(N109):DA(T33) DA(N110):DT(T32) DT(N111):DA(T31) DT(N112):DA(T30) DG(N113):DC(T29) DA(N114):DT(T28) DT(N115):DA(T27) DA(N116):DT(T26) DT(N117):DA(T25) DA(N118):DA(T24) DA(N119):DC(T23) DG(N120):DA(T22) DT(N121):DG(T21) DA(N122):DC(T20) DA(N123):DC(T19) DT(N124):DA(T18) DA(N125):DT(T17) DG(N126):DC(T16) DA(N127):DT(T15) DT(N128):DA(T14) DA(N129):DT(T13) chainA (225) TYR640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 (226) HIS641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (229) SER644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 (230) LYS645 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 0 0 0 (688) GLN1129 0 0 0 0 0 0 0 0 0 0 0 2 10 15 0 0 0 0 0 0 0 0 0 0 0 0 0 (697) PHE1138 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 (710) ARG1151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 prot.sequence inffeiynslptleekkafesalnifnqdrqkvlenrateaarerwkhdfeeakargdisieknlnvklwkwynemlplvkeeinhcrsllseklsdkkglnkvdtnrlgygpyltlidpgkmcvitilellklnstggviegmrtaravisvgkaiemefrseqvlksesqakilwpqsirarigsvlismliqvakvsvqgvdpvtkakvhgeapafahgyqYHngSKlgvlkihktlirqlngerliasvqpqllpmlvepkpwvnwrsggyhytqstllrtkdspeqvaylkaasdngdidrvydglnvlgrtpwtvnrkvfdvvsqvwnkgegfldipgaqdemvlppappknsdpsilrawklqvktiankfssdrsnrcdtnykleiaraflgeklyfphnldfrgrayplsphfnhlgndmsrgllifwhgkklgpsglkwlkihlsnlfgfdklplkdrvafteshlqdikdsaenpltgdrwwttadkpwqalatcfelnevmkmdnpeefishqpvhqdgtcnglqhyaalggdvegatqvnlvpsdkpqdvyahvarlvqkrleiaaekgdenakilkdkitrkvvkqtvmtnvygfskyltkhvfsairelfhsahliqdwlgesakrisksirldvdeksfkngnkpdfmssviwttplglpivqpyreeskkQvetnlqtvFisdpfavnpvnaRrqkaglppnfihsldashmllsaaecgkqgldfasvhdsywthasdidtmnvvlreqfiklhevdlvlrlkeefdqryknyvkigklkrstdlaqkiirirkdlsrklgrsttladeiyfekkrqellneditdldalelengnsgmsvllplrlpeippkgdfdvtvlrnsqyffs >6ymv_AB:DNA/RNA_polymerases;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE PARTIALLY- MELTED TRANSCRIPTION INITIATION COMPLEX (PMIC) organism=? DNA sequence DT(T13):DA(N129) DA(T14):DT(N128) DT(T15):DA(N127) DC(T16):DG(N126) DT(T17):DA(N125) DA(T18):DT(N124) DC(T19):DA(N123) DC(T20):DA(N122) DG(T21):DT(N121) DA(T22):DG(N120) DC(T23):DA(N119) DA(T24):DA(N118) DA(T25):DT(N117) DT(T26):DA(N116) DA(T27):DT(N115) DT(T28):DA(N114) DC(T29):DG(N113) DA(T30):DT(N112) DA(T31):DT(N111) DT(T32):DA(N110) DA(T33):DT(N109) DC(T34):DG(N108) DT(T35):DA(N107) DT(T36):DA(N106) DA(T37):DT(N105) DT(T38):DA(N104) DT(T39):DA(N103) chainB ( 17) TYR18 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 26 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) SER143 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) MET334 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (225) TYR640 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) HIS641 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) SER644 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) LYS645 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (688) GLN1129 0 0 0 0 0 0 0 0 0 0 0 0 0 15 10 2 0 0 0 0 0 0 0 0 0 0 0 (697) PHE1138 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (710) ARG1151 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence inffeiynslptleekkafesalnifnqdrqkvlenrateaarerwkhdfeeakargdisieknlnvklwkwynemlplvkeeinhcrsllseklsdkkglnkvdtnrlgygpyltlidpgkmcvitilellklnstggviegmrtaravisvgkaiemefrseqvlksesqakilwpqsirarigsvlismliqvakvsvqgvdpvtkakvhgeapafahgyqYHngSKlgvlkihktlirqlngerliasvqpqllpmlvepkpwvnwrsggyhytqstllrtkdspeqvaylkaasdngdidrvydglnvlgrtpwtvnrkvfdvvsqvwnkgegfldipgaqdemvlppappknsdpsilrawklqvktiankfssdrsnrcdtnykleiaraflgeklyfphnldfrgrayplsphfnhlgndmsrgllifwhgkklgpsglkwlkihlsnlfgfdklplkdrvafteshlqdikdsaenpltgdrwwttadkpwqalatcfelnevmkmdnpeefishqpvhqdgtcnglqhyaalggdvegatqvnlvpsdkpqdvyahvarlvqkrleiaaekgdenakilkdkitrkvvkqtvmtnvygfskyltkhvfsairelfhsahliqdwlgesakrisksirldvdeksfkngnkpdfmssviwttplglpivqpyreeskkQvetnlqtvFisdpfavnpvnaRrqkaglppnfihsldashmllsaaecgkqgldfasvhdsywthasdidtmnvvlreqfiklhevdlvlrlkeefdqryknyvkigklkrstdlaqkiirirkdlsrklgrsttladeiyfekkrqellneditdldalelengnsgmsvllplrlpeippkgdfdvtvlrnsqyffs/svpipgikdisklkffYgfkylwnptvynkifdkldltktykhpeelkvldlypgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrdpYDWstysnlideerifvpevqssdhindkfltvanvtgegSEgLiMQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmdfvdMyq >6ymv_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE PARTIALLY- MELTED TRANSCRIPTION INITIATION COMPLEX (PMIC) organism=? DNA sequence DA(N103):DT(T39) DA(N104):DT(T38) DT(N105):DA(T37) DA(N106):DT(T36) DA(N107):DT(T35) DG(N108):DC(T34) DT(N109):DA(T33) DA(N110):DT(T32) DT(N111):DA(T31) DT(N112):DA(T30) DG(N113):DC(T29) DA(N114):DT(T28) DT(N115):DA(T27) DA(N116):DT(T26) DT(N117):DA(T25) DA(N118):DA(T24) DA(N119):DC(T23) DG(N120):DA(T22) DT(N121):DG(T21) DA(N122):DC(T20) DA(N123):DC(T19) DT(N124):DA(T18) DA(N125):DT(T17) DG(N126):DC(T16) DA(N127):DT(T15) DT(N128):DA(T14) DA(N129):DT(T13) chainB ( 17) TYR18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 26 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 (142) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (333) MET334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 prot.sequence svpipgikdisklkffYgfkylwnptvynkifdkldltktykhpeelkvldlypgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrdpYDWstysnlideerifvpevqssdhindkfltvanvtgegSEgLiMQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmdfvdMyq >6ymw_AB:DNA/RNA_polymerases;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX organism=? DNA sequence DC(T10):DG(N132) DA(T11):DT(N131) DT(T12):DA(N130) DT(T13):DA(N129) DA(T14):DT(N128) DT(T15):DA(N127) DC(T16):DG(N126) DT(T17):DA(N125) DA(T18):DT(N124) DC(T19):DA(N123) DC(T20):DA(N122) DG(T21):DT(N121) DA(T22):DG(N120) DC(T23):DA(N119) DA(T24):DA(N118) DA(T25):DT(N117) DT(T26):DA(N116) DA(T27):DT(N115) DT(T28):DA(N114) DC(T29):DG(N113) DA(T30):DT(N112) DA(T31):DT(N111) DT(T32):DA(N110) DA(T33):DT(N109) DC(T34):DG(N108) DT(T35):DA(N107) DT(T36):DA(N106) DA(T37):DT(N105) DT(T38):DA(N104) chainB (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 1 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) LYS179 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) TYR335 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) HIS339 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (148) ARG533 0 0 0 0 0 0 0 0 0 0 0 0 0 22 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ILE536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) GLN594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) TYR640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) HIS641 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) ASN642 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) SER644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) LYS645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 (416) TYR831 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (600) GLN1015 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (604) THR1019 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (607) TYR1022 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (609) VAL1024 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (612) VAL1027 0 0 0 0 0 0 0 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (616) PHE1031 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (617) GLN1032 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (714) GLN1129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 1 0 0 0 0 0 0 0 0 0 0 (723) PHE1138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (724) ILE1139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (725) SER1140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (736) ARG1151 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (744) PRO1159 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (748) HIS1163 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence inffeiynslptleekkafesalnifnqdrqkvlenrateaarerwkhdfeeakargdisieknlnvklwkwynemlplvkeeinhcrsllseklsdkkglnkvdtnrlgygpyltlidpgkmcvitilellklnstggviegmrtaRavIsvgkaiemefrseqvlksesqakilwpQsirarigsvlismliqvakvsvqgvdpvtkakvhgeapafahgyqYHNgSKlgvlkihktlirqlngerliasvqpqllpmlvepkpwvnwrsggyhytqstllrtkdspeqvaylkaasdngdidrvydglnvlgrtpwtvnrkvfdvvsqvwnkgegfldipgaqdemvlppappknsdpsilrawklqvktiankfssdrsnrcdtnykleiaraflgeklyfphnldfrgraYplsphfnhlgndmsrgllifwhgkklgpsglkwlkihlsnlfgfdklplkdrvafteshlqdikdsaenpltgdrwwttadkpwqalatcfelnevmkmdnpeefishqpvhqdgtcnglqhyaalggdvegatqvnlvpsdkpqdvyahvarlvqkrleiaaekgdenakilkdkitrkvvkQtvmTnvYgVtyVgatFQiakqlspifddrkesldfskyltkhvfsairelfhsahliqdwlgesakrisksirldvdeksfkngnkpdfmssviwttplglpivqpyreeskkQvetnlqtvFISdpfavnpvnaRrqkaglpPnfiHsldashmllsaaecgkqgldfasvhdsywthasdidtmnvvlreqfiklhevdlvlrlkeefdqryknyvkigklkrstdlaqkiirirkdlsrklgrsttladeiyfekkrqellneditdldalelengnsgmsvllplrlpeippkgdfdvtvlrnsqyffs/svpipgikdisklkffygfkylwnptvynkifdkldltktykhpeelkvldlypgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrdpYDWstysnlideerifvpevqssdhindkfltvanvtgegsEgLiMQwlscignknwlyrfgkvkmllwmpsttarKllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmdfvdmYqteHsg >6ymw_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX organism=? DNA sequence DA(N104):DT(T38) DT(N105):DA(T37) DA(N106):DT(T36) DA(N107):DT(T35) DG(N108):DC(T34) DT(N109):DA(T33) DA(N110):DT(T32) DT(N111):DA(T31) DT(N112):DA(T30) DG(N113):DC(T29) DA(N114):DT(T28) DT(N115):DA(T27) DA(N116):DT(T26) DT(N117):DA(T25) DA(N118):DA(T24) DA(N119):DC(T23) DG(N120):DA(T22) DT(N121):DG(T21) DA(N122):DC(T20) DA(N123):DC(T19) DT(N124):DA(T18) DA(N125):DT(T17) DG(N126):DC(T16) DA(N127):DT(T15) DT(N128):DA(T14) DA(N129):DT(T13) DA(N130):DT(T12) DT(N131):DA(T11) DG(N132):DC(T10) chainB (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 1 0 0 0 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 (178) LYS179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) TYR335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (338) HIS339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence svpipgikdisklkffygfkylwnptvynkifdkldltktykhpeelkvldlypgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrdpYDWstysnlideerifvpevqssdhindkfltvanvtgegsEgLiMQwlscignknwlyrfgkvkmllwmpsttarKllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmdfvdmYqteHsg >6yov_C:Histone-fold; title=OCT4-SOX2-BOUND NUCLEOSOME - SHL+6 organism=? DNA sequence DC(J3):DG(I146) DA(J4):DT(I145) DG(J5):DC(I144) DG(J6):DC(I143) DA(J7):DT(I142) DT(J8):DA(I141) DG(J9):DC(I140) DT(J10):DA(I139) DA(J11):DT(I138) DT(J12):DA(I137) DT(J13):DA(I136) DT(J14):DA(I135) DG(J15):DC(I134) DC(J16):DG(I133) DA(J17):DT(I132) DT(J18):DA(I131) DA(J19):DT(I130) DA(J20):DT(I129) DC(J21):DG(I128) DA(J22):DT(I127) DA(J23):DT(I126) DA(J24):DT(I125) DG(J25):DC(I124) DG(J26):DC(I123) DC(J27):DG(I122) DC(J28):DG(I121) DT(J29):DA(I120) DG(J30):DC(I119) DG(J31):DC(I118) DA(J32):DT(I117) DG(J33):DC(I116) DA(J34):DT(I115) DC(J35):DG(I114) DT(J36):DA(I113) DA(J37):DT(I112) DG(J38):DC(I111) DG(J39):DC(I110) DG(J40):DC(I109) DA(J41):DT(I108) DG(J42):DC(I107) DT(J43):DA(I106) DA(J44):DT(I105) DA(J45):DT(I104) DT(J46):DA(I103) DC(J47):DG(I102) DC(J48):DG(I101) DC(J49):DG(I100) DC(J50):DG(I99) DT(J51):DA(I98) DT(J52):DA(I97) DG(J53):DC(I96) DG(J54):DC(I95) DC(J55):DG(I94) DG(J56):DC(I93) DG(J57):DC(I92) DT(J58):DA(I91) DT(J59):DA(I90) DA(J60):DT(I89) DA(J61):DT(I88) DA(J62):DT(I87) DA(J63):DT(I86) DC(J64):DG(I85) DG(J65):DC(I84) DC(J66):DG(I83) DG(J67):DC(I82) DG(J68):DC(I81) DG(J69):DC(I80) DG(J70):DC(I79) DG(J71):DC(I78) DA(J72):DT(I77) DC(J73):DG(I76) DA(J74):DT(I75) DG(J75):DC(I74) DC(J76):DG(I73) DG(J77):DC(I72) DC(J78):DG(I71) DG(J79):DC(I70) DT(J80):DA(I69) DA(J81):DT(I68) DC(J82):DG(I67) DG(J83):DC(I66) DT(J84):DA(I65) DG(J85):DC(I64) DC(J86):DG(I63) DG(J87):DC(I62) DT(J88):DA(I61) DT(J89):DA(I60) DT(J90):DA(I59) DA(J91):DT(I58) DA(J92):DT(I57) DG(J93):DC(I56) DC(J94):DG(I55) DG(J95):DC(I54) DG(J96):DC(I53) DT(J97):DA(I52) DG(J98):DC(I51) DC(J99):DG(I50) DT(J100):DA(I49) DA(J101):DT(I48) DG(J102):DC(I47) DA(J103):DT(I46) DG(J104):DC(I45) DC(J105):DG(I44) DT(J106):DA(I43) DG(J107):DC(I42) DT(J108):DA(I41) DC(J109):DG(I40) DT(J110):DA(I39) DA(J111):DT(I38) DC(J112):DG(I37) DG(J113):DC(I36) DA(J114):DT(I35) DC(J115):DG(I34) DC(J116):DG(I33) DA(J117):DT(I32) DA(J118):DT(I31) DT(J119):DA(I30) DT(J120):DA(I29) DG(J121):DC(I28) DA(J122):DT(I27) DG(J123):DC(I26) DC(J124):DG(I25) DG(J125):DC(I24) DG(J126):DC(I23) DC(J127):DG(I22) DC(J128):DG(I21) DT(J129):DA(I20) DG(J130):DC(I19) DC(J131):DG(I18) DA(J132):DT(I17) DG(J133):DC(I16) chainC ( 35) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gkarakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp >6yuf_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=COHESIN COMPLEX WITH LOADER GRIPPING DNA organism=? DNA sequence DC(X1):DG(Y36) DA(X2):DT(Y35) DG(X3):DC(Y34) DC(X4):DG(Y33) DA(X5):DT(Y32) DC(X6):DG(Y31) DG(X7):DC(Y30) DA(X8):DT(Y29) DC(X9):DG(Y28) DG(X10):DC(Y27) DT(X11):DA(Y26) DT(X12):DA(Y25) DG(X13):DC(Y24) DT(X14):DA(Y23) DA(X15):DT(Y22) DA(X16):DT(Y21) DA(X17):DT(Y20) DA(X18):DT(Y19) DC(X19):DG(Y18) DG(X20):DC(Y17) DA(X21):DT(Y16) DT(X22):DA(Y15) DT(X23):DA(Y14) DG(X24):DC(Y13) DA(X25):DT(Y12) DG(X26):DC(Y11) DA(X27):DT(Y10) DC(X28):DG(Y9) DA(X29):DT(Y8) DC(X30):DG(Y7) DA(X31):DT(Y6) DC(X32):DG(Y5) chainA ( 93) ALA112 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence grllrlevenfksyrghqiigpfedftsiigpngagksnlmdaisfvlgvksshlrstnvkelipttayvklmyeldngeqreykraitpsgAteykideeivtfseycgslqkenilvrarnflvfqgdvetiasqsplelsklveqisgsleykseydkskdeqdkavnlsahsfnkkrginaelrletvetrlakldeefaaarkaaknakerfnavkqkrlqkfqaafshiseqidpiykeltkspafplggtayltlddldepylggikfhamppmkrfrdmdqlsggektmaalallfaihsyqpspffvldeidaaldqtnvtkianyirqhassgfqfvvislknqlfsksealvgiyrdqqenssrtlsinlegy >6yuf_ACD:P-loop_containing_nucleoside_triphosphate_hydrolases;ARM_repeat; title=COHESIN COMPLEX WITH LOADER GRIPPING DNA organism=? DNA sequence DG(Y5):DC(X32) DT(Y6):DA(X31) DG(Y7):DC(X30) DT(Y8):DA(X29) DG(Y9):DC(X28) DT(Y10):DA(X27) DC(Y11):DG(X26) DT(Y12):DA(X25) DC(Y13):DG(X24) DA(Y14):DT(X23) DA(Y15):DT(X22) DT(Y16):DA(X21) DC(Y17):DG(X20) DG(Y18):DC(X19) DT(Y19):DA(X18) DT(Y20):DA(X17) DT(Y21):DA(X16) DT(Y22):DA(X15) DA(Y23):DT(X14) DC(Y24):DG(X13) DA(Y25):DT(X12) DA(Y26):DT(X11) DC(Y27):DG(X10) DG(Y28):DC(X9) DT(Y29):DA(X8) DC(Y30):DG(X7) DG(Y31):DC(X6) DT(Y32):DA(X5) DG(Y33):DC(X4) DC(Y34):DG(X3) DT(Y35):DA(X2) DG(Y36):DC(X1) chainD chainA ( 93) ALA112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainC prot.sequence grllrlevenfksyrghqiigpfedftsiigpngagksnlmdaisfvlgvksshlrstnvkelipttayvklmyeldngeqreykraitpsgAteykideeivtfseycgslqkenilvrarnflvfqgdvetiasqsplelsklveqisgsleykseydkskdeqdkavnlsahsfnkkrginaelrletvetrlakldeefaaarkaaknakerfnavkqkrlqkfqaafshiseqidpiykeltkspafplggtayltlddldepylggikfhamppmkrfrdmdqlsggektmaalallfaihsyqpspffvldeidaaldqtnvtkianyirqhassgfqfvvislknqlfsksealvgiyrdqqenssrtlsinlegy/yitkiviqgfksykdytvieplsphhnvivgrngsgksnffaairfvlsdaythlsreerqallhegpgatvmsayvevtfanadnrfptgkSevvlrrtiglkkdeysldkktvsktevinllesagfsrsnpyyivpqgrvtsltnakdserlellkevagtqiyenrraesnkimdetiqksekidellqyieerlreleeekndlavyhkkdnerrcleyaiysrehdeinsvldssnaivkklhkinealkdygsvnkkayeqfnnftkqrdsllarreelrrsqesiselttvldqrkdeaiertfkqvaksfseifvklvpagrgelvmnrrsisirvsfnskddeqlninqlsggqkslcaltlifaiqrcdpapfnildecdanldaqyrsaiaamvkemsktsqficttfrpemvkvadnfygvmfnhkvstvesiskeeamafve/pskiqrlqdvllkqlqdtrllisqvieaensedfssnslfikredddgkhisshaieklymaltklsrlgacdklleegsiilvkqilekelKefpnldfilkttalvlfiiflvpsfkklqneesilhllnilhsifeytvpeaidnivqsktsdartseiqhlsvllqkvanvlnilskvaheiplseavvirivylfpkvstldnsfktklpncnsssfdflkaplfqtlqylfrlypyqrdfiieesltnfshlptarsvsrtyrlsngksiqyystlfvrliqscsiqnlfdseivqseskstealhsgnltehlktvesilsksrheeyrianhivayllsrslkqnktesdnsfailtkilledllnmlslpewcgtetiirqfamnlvmtvtndkqavssknaaldlislivnkvlalfdlslfekhnipaptnfndiisfipsitrlnelsqvsfnhfyflckgdislenilpynynkwfsfllqlrkvcndsealkiidncidknmqksqegfndedifiislyhsslflnlkffvsliigfldspqaslrtkclriinqmktipsilrthpevlaqiisksndqsaivrdtvldllgtyimayretipqiygciisgisdpstivrkraikqlcevyeatedlnirvdiasklltrsndeeetiselslevleklwfspasneldcqkgyeqltflekqklrvqyfpilklcaepsterhvllvtslktmltskeeinlstlhtqirlllsclfnqlievvtetkgilyeimstlfvfsrafpflfdlsylhllkpylrsastieeqrflyyvvaifrqvlpfqkeisesflrslesvllqrltkagtatlmeivpclcslftrlndyerlkkivvsclksleearhsennfqkmvrlidliglfsrygdlnrinddwkhsldfispecddayvillgyfqkllkdakgqlrihiidnmsriclretslfisplmlstldmiiaennvnevsvlfksflellaadedlifeadqklslkgkqnvkqwiegvsaslmqhflpcildscfsknlrysmlgieilkciihqglvnprmcfstiialesnaiketrevaillhtelhrrheslidglyaqsadlifslqkteeyqtfklgefspfqsaytivsadkssksrkklimqilkplkldgidlpsfteekvsfvsfccvclagipyvsieeplmiistvdsvlatigptitgwmkkldherfkilaginlcnliylkryikyafsisds >6yww_A:DNA-binding_domain; title=MECP2 IS A MICROSATELLITE BINDING PROTEIN THAT PROTECTS CA REPEATS FROM NUCLEOSOME INVASION organism=Homo sapiens DNA sequence DT(C22):DA(B20) DA(C23):DT(B19) DT(C24):DA(B18) DA(C25):DT(B17) DA(C26):DT(B16) DT(C27):DA(B15) DT(C28):DA(B14) DG(C29):DC(B13) DT(C30):DA(B12) DG(C31):DC(B11) DT(C32):DA(B10) DT(C34):DA(B8) DG(C35):DC(B7) DT(C36):DA(B6) DG(C37):DC(B5) DC(C38):DG(B4) DA(C39):DT(B3) DG(C40):DC(B2) chainA ( 20) ARG111 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 ( 28) LYS119 0 0 0 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 ( 30) ASP121 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 32) TYR123 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 42) ARG133 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 prot.sequence gpmyddptlpegwtrklkqRksgrsagKyDvYlinpqgkafRskveliayfekvgdtsldpndfdftvtgr >6z1a_B:Type_II_DNA_topoisomerase; title=TERNARY COMPLEX OF STAPHYLOCOCCUS AUREUS DNA GYRASE WITH AMK12 AND DNA organism=? DNA sequence DG(h1):DC(e12) DT(h2):DA(e11) DA(h3):DT(e10) DC(h4):DG(e9) DC(h5):DG(e8) DT(h6):DA(e7) DA(h7):DT(e6) DC(h8):DG(e5) DG(h9):DC(e4) DG(h10):DC(e3) DC(h11):DG(e2) DT(h12):DA(e1) chainB ( 42) ARG458 0 0 4 1 0 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 2 4 0 0 0 0 0 0 (265) SER1085 0 0 0 0 0 2 0 0 0 0 0 0 (272) ARG1092 0 0 0 0 0 0 1 0 0 0 0 0 (355) ILE1175 0 0 0 0 0 0 0 15 24 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyeamvRmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseleailadeevllqlvrdelteirdrfgddrrteiqlg >6z8v_H:Trypsin-like_serine_proteases; title=X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA THROMBIN AND A THROMBIN BINDING APTAMER VARIANT (TBA-3L), WHICH CONTAINS 1-BETA-D- LACTOPYRANOSYL RESIDUE IN THE SIDE CHAIN OF THY3 AT N3. organism=HOMO SAPIENS DNA sequence DG(A1) DG(A2) DT(A4) DG(A5) DG(A6) DT(A7) DG(A8) DT(A9) DG(A10) DG(A11) DT(A12) DT(A13) DG(A14) DG(A15) chainH ( 9) ILE24 0 0 0 0 0 0 0 0 0 0 8 0 0 0 ( 66) HIS71 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 70) ARG75 0 0 10 25 0 0 0 0 0 11 4 8 0 0 ( 71) TYR76 0 0 12 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLU77 0 0 0 0 0 0 0 0 0 0 11 0 0 0 ( 73) ARG77A 0 4 5 0 0 0 0 0 0 0 0 11 33 0 ( 75) ILE79 0 0 0 0 0 0 0 0 0 0 7 7 0 0 prot.sequence ivegsdaeIgmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkHsrtRYeRnIekismlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketwgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfg >6z8w_H:Trypsin-like_serine_proteases; title=X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA THROMBIN AND A THROMBIN BINDING APTAMER VARIANT (TBA-3G), WHICH CONTAINS 1-BETA-D- GLUCOPYRANOSYL RESIDUE IN THE SIDE CHAIN OF THY3 AT N3. organism=HOMO SAPIENS DNA sequence DG(A1) DG(A2) DT(A4) DG(A5) DG(A6) DT(A7) DG(A8) DT(A9) DG(A10) DG(A11) DT(A12) DT(A13) DG(A14) DG(A15) chainH ( 9) ILE24 0 0 0 0 0 0 0 0 0 0 9 0 0 0 ( 66) HIS71 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 70) ARG75 0 0 9 25 0 0 0 0 0 11 4 8 0 0 ( 71) TYR76 0 0 11 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLU77 0 0 0 0 0 0 0 0 0 0 11 0 0 0 ( 73) ARG77A 0 4 5 0 0 0 0 0 0 0 0 11 32 0 ( 75) ILE79 0 0 0 0 0 0 0 0 0 0 7 6 0 0 prot.sequence ivegsdaeIgmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkHsrtRYeRnIekismlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketwgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqf >6z8x_H:Trypsin-like_serine_proteases; title=X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA THROMBIN AND A THROMBIN BINDING APTAMER VARIANT (TBA-3LEU), WHICH CONTAINS LEUCYL AMIDE IN THE SIDE CHAIN OF THY3 AT N3. organism=HOMO SAPIENS DNA sequence DG(B1) DG(B2) DT(B4) DG(B5) DG(B6) DT(B7) DG(B8) DG(B10) DG(B11) DT(B12) DT(B13) DG(B14) DG(B15) chainH ( 9) ILE24 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 66) HIS71 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 70) ARG75 0 0 3 26 0 0 0 0 9 0 8 0 0 ( 71) TYR76 0 0 15 0 0 0 0 0 0 0 0 0 0 ( 72) GLU77 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 73) ARG77A 0 4 5 0 0 0 0 0 0 0 11 29 0 ( 75) ILE79 0 0 0 0 0 0 0 0 0 7 5 0 0 (114) TYR117 0 0 0 0 0 0 0 0 0 6 0 0 0 prot.sequence ivegsdaeIgmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkHsrtRYeRnIekismlekiyihprynwrenldrdialmklkkpvafsdYihpvclpdretaasllqagykgrvtgwgnlketgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidq >6z9q_X:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=TRANSCRIPTION TERMINATION INTERMEDIATE COMPLEX 2 organism=? DNA sequence DG(K-35):DC(L35) DG(K-34):DC(L34) DG(K-33):DC(L33) DC(K-32):DG(L32) DT(K-31):DA(L31) DG(K-30):DC(L30) DC(K-29):DG(L29) DG(K-28):DC(L28) DA(K-27):DT(L27) DA(K-26):DT(L26) DT(K-25):DA(L25) DA(K-24):DT(L24) DC(K-18):DT(L23) DG(K-17):DG(L22) DA(K-16):DC(L21) DG(K-15):DC(L20) DC(K-14):DG(L19) DA(K-13):DG(L18) DG(K-12):DC(L17) DC(K-11):DT(L16) DT(K-3):DC(L15) DA(K-2):DG(L14) DC(K-1):DT(L13) DT(K0):DC(L12) DT(K1):DG(L11) DG(K2):DC(L10) DT(K3):DG(L9) DG(K4):DC(L8) DA(K5):DA(L7) DG(K6):DC(L6) DC(K7):DA(L5) DG(K8):DC(L4) DG(K9):DC(L3) DA(K10):DG(L2) DT(K11):DT(L1) DA(K12):DA(L0) chainX (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 8 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >6z9s_Y:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=TRANSCRIPTION TERMINATION INTERMEDIATE COMPLEX 4 organism=? DNA sequence DT(L-12):DA(K12) DA(L-11):DT(K11) DT(L-10):DA(K10) DC(L-9):DG(K9) DC(L-8):DG(K8) DG(L-7):DC(K7) DC(L-6):DG(K6) DT(L-5):DA(K5) DC(L-4):DG(K4) DA(L-3):DT(K3) DC(L-2):DG(K2) DA(L-1):DT(K1) DA(L0):DT(K0) DT(L1):DC(K-1) DG(L2):DA(K-2) DC(L3):DT(K-9) DC(L4):DG(K-10) DA(L5):DC(K-11) DC(L6):DG(K-12) DA(L7):DA(K-13) DC(L8):DC(K-14) DG(L9):DG(K-15) DC(L10):DA(K-16) DG(L11):DG(K-17) DC(L12):DC(K-18) DT(L13):DC(K-19) chainY (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (263) ARG278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (304) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnRlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgSnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6za3_AB:GntR_ligand-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE TRANSCRIPTIONAL REPRESSOR ATU1419 (VANR) FROM AGROBACTERIUM FABRUM IN COMPLEX A PALINDROMIC DNA (C2221 SPACE GROUP) organism=AGROBACTERIUM FABRUM STR. C58 DNA sequence DA(E1):DT(F10) DT(E2):DA(F9) DG(E3):DC(F8) DT(E4):DA(F7) DA(E5):DT(F6) DT(E6):DA(F5) DA(E7):DT(F4) DC(E8):DG(F3) DA(E9):DT(F2) DT(E10):DA(F1) chainA ( 29) VAL35 0 1 0 0 0 0 0 0 0 0 ( 38) SER44 0 0 0 0 2 4 0 0 0 0 ( 39) ARG45 0 18 13 5 1 0 0 0 0 0 ( 40) THR46 0 0 0 0 3 8 3 0 0 0 ( 43) ARG49 0 0 0 4 0 0 0 0 0 0 chainB ( 30) VAL35 0 0 0 0 0 0 0 0 1 0 ( 39) SER44 0 0 0 0 4 2 0 0 0 0 ( 40) ARG45 0 0 0 0 0 1 5 12 19 0 ( 41) THR46 0 0 0 4 10 4 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 5 2 0 0 prot.sequence athggravielrekilsgelpggmrlfeVstaelldiSRTpvRealsrlteegllnrlpgggfvvrrfgfadvvdaievrgvmegtaarlaaergvskvaleeidatvqqldlcfgdrvddvdfdgyaalnrifhhqlaalcgsemirreverasslpfaspsaflpdkanigafrrslrgaqeqhkaivaaivaregaraeavarehsrtartnleymireapeliaqvpglalisd/aathggravielrekilsgelpggmrlfeVstaelldiSRTpvRealsrlteegllnrlpgggfvvrrfgfadvvdaievrgvmegtaarlaaergvskvaleeidatvqqldlcfgdrvddvdfdgyaalnrifhhqlaalcgsemirreverasslpfaspsaflpdkanigafrrslrgaqeqhkaivaaivaregaraeavarehsrtartnleymireapeliaqvpglalisd >6za3_B:GntR_ligand-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE TRANSCRIPTIONAL REPRESSOR ATU1419 (VANR) FROM AGROBACTERIUM FABRUM IN COMPLEX A PALINDROMIC DNA (C2221 SPACE GROUP) organism=AGROBACTERIUM FABRUM STR. C58 DNA sequence DA(E1):DT(F10) DT(E2):DA(F9) DG(E3):DC(F8) DT(E4):DA(F7) DA(E5):DT(F6) DT(E6):DA(F5) DA(E7):DT(F4) DC(E8):DG(F3) DA(E9):DT(F2) DT(E10):DA(F1) chainB ( 30) VAL35 0 0 0 0 0 0 0 0 1 0 ( 39) SER44 0 0 0 0 4 2 0 0 0 0 ( 40) ARG45 0 0 0 0 0 1 5 12 19 0 ( 41) THR46 0 0 0 4 10 4 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 5 2 0 0 prot.sequence aathggravielrekilsgelpggmrlfeVstaelldiSRTpvRealsrlteegllnrlpgggfvvrrfgfadvvdaievrgvmegtaarlaaergvskvaleeidatvqqldlcfgdrvddvdfdgyaalnrifhhqlaalcgsemirreverasslpfaspsaflpdkanigafrrslrgaqeqhkaivaaivaregaraeavarehsrtartnleymireapeliaqvpglalisd >6zh8_A:Protein_kinase-like_PK-like;ARM_repeat; title=CRYO-EM STRUCTURE OF DNA-PKCS:DNA organism=HOMO SAPIENS DNA sequence DA(C26):DT(B30) DC(C27):DG(B29) DT(C28):DA(B28) DA(C29):DT(B27) DA(C30):DT(B26) DA(C31):DT(B25) DA(C32):DT(B24) DA(C33):DT(B23) chainA (238) LYS263 0 0 0 0 0 0 2 0 prot.sequence rcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmlpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlKryavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladeaffsvnssseslnhllydefvksvlkivekldltleiqmiptsdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegvspdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsalsleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekctgaagnrtspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgderqclpsldlsckqlasgllelafafgglcerlvslllnpavlstasvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrmdelnrhecmapltalvkhmhrslprdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrllplppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgsssedsekviaglyqrafqhlseavqaaeeeapaagvidaymtladfcdqqlrkeeenqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwmxxxxxxxxxxxxxxxxxxxxxxxxxx >6zha_ABC:SPOC_domain-like;vWA-like;Protein_kinase-like_PK-like;ARM_repeat;C-terminal_domain_of_Ku80; title=CRYO-EM STRUCTURE OF DNA-PK MONOMER organism=HOMO SAPIENS DNA sequence DA(D21):DT(E35) DA(D22):DT(E34) DT(D23):DA(E33) DA(D24):DT(E32) DA(D25):DT(E31) DA(D26):DT(E30) DC(D27):DG(E29) DT(D28):DA(E28) DA(D29):DT(E27) DA(D30):DT(E26) DA(D31):DT(E25) DA(D32):DT(E24) DA(D33):DT(E23) DC(D34):DG(E22) chainA chainB (209) ARG254 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (358) ARG403 0 0 0 0 0 0 0 0 0 1 1 0 0 0 chainC (256) ARG271 0 0 0 0 1 4 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkryavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladeaffsvnssseslnhllydefvksvlkivekldltleiqmiptsdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegvspdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsaaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqppmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcfggnrtspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgderqclpsldlsckqlasgllelafafgglcerlvslllnpavlstsvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrmdelnrhecmapltalvkhmhrslprdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwraqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrllplppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgsssedsekviaglyqrafqhlseavqaaeeeaaagvidaymtladfcdqqlrkeeelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwmxxxxxxxxxxxxxxxxxxxxxxxxxxxx/ysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeif >6zha_B:SPOC_domain-like;vWA-like; title=CRYO-EM STRUCTURE OF DNA-PK MONOMER organism=? DNA sequence DA(D21):DT(E35) DA(D22):DT(E34) DT(D23):DA(E33) DA(D24):DT(E32) DA(D25):DT(E31) DA(D26):DT(E30) DC(D27):DG(E29) DT(D28):DA(E28) DA(D29):DT(E27) DA(D30):DT(E26) DA(D31):DT(E25) DA(D32):DT(E24) DA(D33):DT(E23) DC(D34):DG(E22) chainB (209) ARG254 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (358) ARG403 0 0 0 0 0 0 0 0 0 1 1 0 0 0 prot.sequence ysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy >6zhe_C:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=CRYO-EM STRUCTURE OF DNA-PK DIMER organism=? DNA sequence DT(D14):DA(E42) DA(D15):DT(E41) DA(D16):DT(E40) DT(D17):DA(E39) DA(D18):DT(E38) DA(D19):DT(E37) DT(D20):DA(E36) DA(D21):DT(E35) DG(D22):DC(E34) DT(D23):DA(E33) DT(D24):DA(E32) DT(D25):DA(E31) DT(D26):DA(E30) DT(D27):DA(E29) DA(D28):DT(E28) DG(D29):DC(E27) DT(D30):DA(E26) DT(D31):DA(E25) DT(D32):DA(E24) DA(D33):DT(E23) DT(D34):DA(E22) DT(D35):DA(E21) DG(D36):DT(E20) DG(D37):DC(E19) DG(D38):DG(E18) DC(D39):DA(E17) chainC (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkranpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeifqdnhedgptakklkteqggahfsvssnpaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkflapkdkpsgdtaavfeeggdvddlldmi >6zhx_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE REGULATORY LINKER OF ALC1 BOUND TO THE NUCLEOSOME'S ACIDIC PATCH: NUCLEOSOME CLASS. organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirgera/kvLRdniqgitkpairrlarrggvkriSgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/tRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/rrktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/tRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/rRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >6zhx_C:Histone-fold; title=CRYO-EM STRUCTURE OF THE REGULATORY LINKER OF ALC1 BOUND TO THE NUCLEOSOME'S ACIDIC PATCH: NUCLEOSOME CLASS. organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk >6zhy_ABCDEF:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE REGULATORY LINKER OF ALC1 BOUND TO THE NUCLEOSOME'S ACIDIC PATCH: HEXASOME CLASS. organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyaErvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgissKamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >6zix_AB:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=STRUCTURE OF RCSB FROM SALMONELLA ENTERICA SEROVAR TYPHIMURIUM BOUND TO PROMOTER P1FLHDC IN THE PRESENCE OF PHOSPHOMIMETIC BEF3- organism=? DNA sequence DC(F19):DG(E21) DC(F20):DG(E20) DT(F21):DA(E19) DA(F22):DT(E18) DA(F23):DT(E17) DG(F24):DC(E16) DA(F25):DT(E15) DT(F26):DA(E14) DT(F27):DA(E13) DT(F28):DA(E12) DT(F29):DA(E11) DT(F30):DA(E10) DC(F31):DG(E9) DC(F32):DG(E8) DT(F33):DA(E7) DA(F34):DT(E6) DA(F35):DT(E5) DT(F36):DA(E4) DT(F37):DA(E3) DC(F38):DG(E2) chainB (175) ILE179 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 (176) LYS180 0 0 0 0 0 0 0 0 0 0 1 7 9 8 0 0 0 0 0 0 (177) THR181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 (179) SER183 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (180) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 (181) GLN185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 chainA (173) ILE179 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 (174) LYS180 0 0 0 2 13 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) THR181 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) SER183 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) SER184 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) GLN185 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgesvsrllekisaggygdkrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylssv/nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgkkftpesvsrllekisagdkrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylssvt >6zix_B:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=STRUCTURE OF RCSB FROM SALMONELLA ENTERICA SEROVAR TYPHIMURIUM BOUND TO PROMOTER P1FLHDC IN THE PRESENCE OF PHOSPHOMIMETIC BEF3- organism=? DNA sequence DG(E2):DC(F38) DA(E3):DT(F37) DA(E4):DT(F36) DT(E5):DA(F35) DT(E6):DA(F34) DA(E7):DT(F33) DG(E8):DC(F32) DG(E9):DC(F31) DA(E10):DT(F30) DA(E11):DT(F29) DA(E12):DT(F28) DA(E13):DT(F27) DA(E14):DT(F26) DT(E15):DA(F25) DC(E16):DG(F24) DT(E17):DA(F23) DT(E18):DA(F22) DA(E19):DT(F21) DG(E20):DC(F20) DG(E21):DC(F19) chainB (175) ILE179 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 (176) LYS180 0 0 0 0 0 0 8 9 7 1 0 0 0 0 0 0 0 0 0 0 (177) THR181 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) SER183 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (180) SER184 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) GLN185 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgkkftpesvsrllekisagdkrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylssvt >6zj2_AB:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=STRUCTURE OF RCSB FROM SALMONELLA ENTERICA SEROVAR TYPHIMURIUM BOUND TO PROMOTER RPRA IN THE PRESENCE OF PHOSPHOMIMETIC BEF3- organism=? DNA sequence DC(I18):DG(G22) DG(I19):DC(G21) DA(I20):DT(G20) DT(I21):DA(G19) DC(I22):DG(G18) DA(I23):DT(G17) DG(I24):DC(G16) DA(I25):DT(G15) DT(I26):DA(G14) DT(I27):DA(G13) DC(I28):DG(G12) DG(I29):DC(G11) DT(I30):DA(G10) DC(I31):DG(G9) DT(I32):DA(G8) DC(I33):DG(G7) DA(I34):DT(G6) DA(I35):DT(G5) DT(I36):DA(G4) DA(I37):DT(G3) DG(I38):DC(G2) chainB (178) ILE179 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (179) LYS180 0 0 0 0 0 0 0 0 0 0 0 0 7 12 12 2 0 0 0 0 0 (180) THR181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (182) SER183 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (183) SER184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 chainA (174) LYS180 0 0 0 0 0 12 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) THR181 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) SER183 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) SER184 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkpesvsrllekisaggygdkrlspkesevlrlfaegflvteiakklnrsiKTiSSqkksammklgvendiallnylssv/nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgkkftpesvsrllekisaggygdkrlspkesevlrlfaegflvteiakklnrsIKTiSSqkksammklgvendiallnylssvt >6zmn_B:SMAD_MH1_domain; title=CRYSTAL STRUCTURE OF THE SMAD3-SMAD5 MH1 DOMAIN CHIMERA BOUND TO THE GGCGC SITE organism=Homo sapiens DNA sequence DT(D1):DA(C16) DG(D2):DC(C15) DC(D3):DG(C14) DA(D4):DT(C13) DG(D5):DC(C12) DG(D6):DC(C11) DC(D7):DG(C10) DG(D8):DC(C9) DC(D9):DG(C8) DG(D10):DC(C7) DC(D11):DG(C6) DC(D12):DG(C5) DT(D13):DA(C4) DG(D14):DC(C3) DC(D15):DG(C2) DA(D16):DT(C1) chainB ( 61) ASP69 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 63) ARG71 0 0 0 4 10 1 0 0 0 0 0 0 0 0 0 0 ( 65) GLN73 0 0 0 0 0 0 1 8 4 0 0 0 0 0 0 0 ( 70) LYS78 0 0 0 0 0 4 7 1 0 0 0 0 0 0 0 0 prot.sequence gpavkrllgwkqgdeeekwcekavkslvkklkktgqldelekaittqnvntkcitiprslDgRlQvshrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrv >6znc_A:p53-like_transcription_factors; title=STRUCTURAL BASIS OF REACTIVATION OF ONCOGENIC P53 MUTANTS BY A SMALL MOLECULE: METHYLENE QUINUCLIDINONE (MQ). HUMAN WILD-TYPE P53DBD BOUND TO DNA AND MQ: WT-DNA-MQ (I) organism=Homo sapiens DNA sequence DC(B1) DG(B2) DG(B3) DG(B4) DC(B5) DA(B6) DT(B7) DG(B8) DC(B9) DC(B10) DC(B11) DG(B12) chainA ( 27) LYS120 0 1 7 5 0 0 0 0 0 0 0 0 ( 72) GLN165 0 0 0 0 0 0 0 0 0 0 0 8 ( 73) SER166 0 0 0 0 0 0 0 0 0 0 0 5 ( 74) GLN167 0 0 0 0 0 0 0 0 0 0 4 0 (181) ARG280 0 0 0 3 1 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykQSQhmtevvrrcphherclappqhlirvegnlrveylddrntfrhsvvvpyeppevsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkkg >6ztj_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=E. COLI 70S-RNAP EXPRESSOME COMPLEX IN NUSG-COUPLED STATE (38 NT INTERVENING MRNA) organism=? DNA sequence DG(N10):DC(T30) DT(N11):DA(T29) DC(N12):DG(T28) DC(N13):DG(T27) DT(N14):DA(T26) DA(N15):DT(T25) DT(N16):DG(T24) DC(N17):DC(T23) DG(N18):DC(T22) DA(N19):DG(T21) DT(N20):DC(T20) DC(N21):DG(T19) DT(N22):DC(T18) DT(N23):DG(T17) DC(N24):DC(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DA(N36):DT(T4) DG(N37):DC(T3) DA(N38):DT(T2) DG(N39):DC(T1) chainC (607) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (638) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (654) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (655) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (607) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (638) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (654) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (655) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (607) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (638) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (654) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (655) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (823) ARG371 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (846) ARG394 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (897) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (898) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (903) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (990) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (994) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (999) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gqkvhpngirlgivkpwnstwfantkefadnldsdfkvrqyltkelakasvsrivierpaksirvtihtarpgivigkkgedveklrkvvadiagvpaqiniaevrkpeldaklvadsitsqlerrvmfrramkravqnamrlgakgikvevsgrlggaeiartewyregrvplhtlradidyntseahttygvigvkvwifkgeilggmaavvkckptspgrrhvvkvvnpelhkgkpfaplleknsksggrnnngrittrhiggghkqayrivdfkrnkdgipavverleydpnrsanialvlykdgerryilapkglkagdqiqsgvdaaikpgntlpmrnipvgstvhnvemkpgkggqlarsagtyvqivardgayvtlrlrsgemrkveadcratlgevgnaehmlrvlgkagaarwrgvrptvrgtamnpvdhphgggegrnfgkhpvtpwgvqtkgkktrsnkrtdkfivrrrskmvysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6ztl_F:RL5-like;Ribosomal_protein_S6;N-utilization_substance_G_protein_NusG,_N-terminal_domain; title=E. COLI 70S-RNAP EXPRESSOME COMPLEX IN COLLIDED STATE BOUND TO NUSG organism=? DNA sequence DC(T1):DG(N39) DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DC(T16):DC(N24) DG(T17):DT(N23) DC(T18):DT(N22) DG(T19):DC(N21) DC(T20):DT(N20) DG(T21):DA(N19) DC(T22):DG(N18) DC(T23):DC(N17) DG(T24):DT(N16) DT(T25):DA(N15) DA(T26):DT(N14) DG(T27):DC(N13) DG(T28):DC(N12) DA(T29):DT(N11) DC(T30):DG(N10) chainF (115) VAL12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (285) GLN13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 (286) ALA14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (288) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (295) SER25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (299) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (324) TYR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (325) VAL69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (340) SER85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (341) VAL86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 (342) PRO87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 (343) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 89) VAL89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (115) VAL12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (285) GLN13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 (286) ALA14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (288) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (295) SER25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (299) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (324) TYR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (325) VAL69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (341) VAL86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 (342) PRO87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 (343) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (285) GLN13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 (286) ALA14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (288) SER16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (295) SER25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (299) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (324) TYR68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (325) VAL69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (340) SER85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (341) VAL86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 (342) PRO87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 (343) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence mrhyeivfmvhpdqseqvpgmierytaaitgaegkihrledwgrrqlaypinklhkahyvlmnveapqevidelettfrfndavirsmvmrtkhavteaspmvkaklhdyykdevvkklmtefnynsvmqvprvekitlnmgvgeaiadkklldnaaadlaaisgqkplitkarksvagfkirqgypigckvtlrgermwefferlitiavprirdfrglsaksfdgrgnysmgvreqiifpeidydkvdrvrgldititttaksdeegrallaafdfpfrkkkrwyvVQAfSgfegrvatSlreHiklhnmedlfgevmvpteekffpgYVlvqmvmndaswhlvrSVPRVMgfiggtsdrpapisdkevdaimnrlqq >6ztm_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins;Alpha-L_RNA-binding_motif; title=E. COLI 70S-RNAP EXPRESSOME COMPLEX IN COLLIDED STATE WITHOUT NUSG organism=? DNA sequence DG(N10):DC(T30) DT(N11):DA(T29) DC(N12):DG(T28) DC(N13):DG(T27) DT(N14):DA(T26) DA(N15):DT(T25) DT(N16):DG(T24) DC(N17):DC(T23) DG(N18):DC(T22) DA(N19):DG(T21) DT(N20):DC(T20) DC(N21):DG(T19) DT(N22):DC(T18) DT(N23):DG(T17) DC(N24):DC(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DA(N36):DT(T4) DG(N37):DC(T3) DA(N38):DT(T2) DG(N39):DC(T1) chainD (572) THR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 (631) ARG271 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (635) ARG275 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (674) ARG314 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (787) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1150) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence arylgpklklsrregtdlflksgvraidtkckieqapgqhgarkprlsdygvqlrekqkvrriygvlerqfrnyykeaarlkgntgenllallegrldnvvyrmgfgatraearqlvshkaimvngrvvniasyqvspndvvsirekakkqsrvkaalelaeqrekptwlevdagkmegtfkrkpersdlsadinehlivelyskmiglvgkkvgmtriftedgvsipvtvieveanrvtqvkdlandgyraiqvttgakkanrvtkpeaghfakagveagrglwefrlaegeeftvgqsisvelfadvkkvdvtgtskgkgfagtvkrwnfrtqdathgnslshrvpgsigqntpgkvfkgkkmagqmgnervtvqsldvvrvdaernlllvkgavpgatgsdlivkpavkaeefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrRvinRnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6ztn_F:RL5-like;Ribosomal_protein_S6;N-utilization_substance_G_protein_NusG,_N-terminal_domain; title=E. COLI 70S-RNAP EXPRESSOME COMPLEX IN NUSG-COUPLED STATE (42 NT INTERVENING MRNA) organism=? DNA sequence DG(N10):DC(T30) DT(N11):DA(T29) DC(N12):DG(T28) DC(N13):DG(T27) DT(N14):DA(T26) DA(N15):DT(T25) DT(N16):DG(T24) DC(N17):DC(T23) DG(N18):DC(T22) DA(N19):DG(T21) DT(N20):DC(T20) DC(N21):DG(T19) DT(N22):DC(T18) DT(N23):DG(T17) DC(N24):DC(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DA(N36):DT(T4) DG(N37):DC(T3) DA(N38):DT(T2) DG(N39):DC(T1) chainF (285) GLN13 0 0 0 0 0 0 0 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) TYR68 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) ARG84 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) SER85 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) VAL86 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) PRO87 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) VAL89 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (346) ILE93 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) GLN13 0 0 0 0 0 0 0 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) TYR68 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) ARG84 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) VAL86 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) PRO87 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (346) ILE93 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) GLN13 0 0 0 0 0 0 0 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) TYR68 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) ARG84 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) SER85 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) VAL86 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) PRO87 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (346) ILE93 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrhyeivfmvhpdqseqvpgmierytaaitgaegkihrledwgrrqlaypinklhkahyvlmnveapqevidelettfrfndavirsmvmrtkhavteaspmvkaklhdyykdevvkklmtefnynsvmqvprvekitlnmgvgeaiadkklldnaaadlaaisgqkplitkarksvagfkirqgypigckvtlrgermwefferlitiavprirdfrglsaksfdgrgnysmgvreqiifpeidydkvdrvrgldititttaksdeegrallaafdfpfrkkkrwyvvQafsgfegrvatslrehiklhnmedlfgevmvpteekffpgYvlvqmvmndaswhlvRSVPrVMgfIggtsdrpapisdkevdaimnrlqq >6zto_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=E. COLI 70S-RNAP EXPRESSOME COMPLEX IN UNCOUPLED STATE 1 organism=? DNA sequence DC(T1):DG(N39) DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DC(T16):DC(N24) DG(T17):DT(N23) DC(T18):DT(N22) DG(T19):DC(N21) DC(T20):DT(N20) DG(T21):DA(N19) DC(T22):DG(N18) DC(T23):DC(N17) DG(T24):DT(N16) DT(T25):DA(N15) DA(T26):DT(N14) DG(T27):DC(N13) DG(T28):DC(N12) DA(T29):DT(N11) DC(T30):DG(N10) chainC (605) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (636) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (652) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (653) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (605) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (636) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (652) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (653) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (605) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (636) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (652) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (653) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (822) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (845) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (896) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (897) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (902) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (989) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (993) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (998) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gqkvhpngirlgivkpwnstwfantkefadnldsdfkvrqyltkelakasvsrivierpaksirvtihtarpgivigkkgedveklrkvvadiagvpaqiniaevrkpeldaklvadsitsqlerrvmfrramkravqnamrlgakgikvevsgrlggaeiartewyregrvplhtlradidyntseahttygvigvkvwifkgeilggavvkckptspgrrhvvkvvnpelhkgkpfaplleknsksggrnnngrittrhiggghkqayrivdfkrnkdgipavverleydpnrsanialvlykdgerryilapkglkagdqiqsgvdaaikpgntlpmrnipvgstvhnvemkpgkggqlarsagtyvqivardgayvtlrlrsgemrkveadcratlgevgnaehmlrvlgkagaarwrgvrptvrgtamnpvdhphgggegrnfgkhpvtpwgvqtkgkktrsnkrtdkfivrrrskmvysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >6zu1_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins;Alpha-L_RNA-binding_motif; title=E. COLI 70S-RNAP EXPRESSOME COMPLEX IN UNCOUPLED STATE 2 organism=? DNA sequence DG(N10):DC(T30) DT(N11):DA(T29) DC(N12):DG(T28) DC(N13):DG(T27) DT(N14):DA(T26) DA(N15):DT(T25) DT(N16):DG(T24) DC(N17):DC(T23) DG(N18):DC(T22) DA(N19):DG(T21) DT(N20):DC(T20) DC(N21):DG(T19) DT(N22):DC(T18) DT(N23):DG(T17) DC(N24):DC(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DA(N36):DT(T4) DG(N37):DC(T3) DA(N38):DT(T2) DG(N39):DC(T1) chainD (572) THR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 (631) ARG271 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (635) ARG275 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (674) ARG314 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (787) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1150) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence arylgpklklsrregtdlflksgvraidtkckieqapgqhgarkprlsdygvqlrekqkvrriygvlerqfrnyykeaarlkgntgenllallegrldnvvyrmgfgatraearqlvshkaimvngrvvniasyqvspndvvsirekakkqsrvkaalelaeqrekptwlevdagkmegtfkrkpersdlsadinehlivelyskmiglvgkkvgmtriftedgvsipvtvieveanrvtqvkdlandgyraiqvttgakkanrvtkpeaghfakagveagrglwefrlaegeeftvgqsisvelfadvkkvdvtgtskgkgfagtvkrwnfrtqdathgnslshrvpgsigqntpgkvfkgkkmagqmgnervtvqsldvvrvdaernlllvkgavpgatgsdlivkpavkaeefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrRvinRnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >6zy5_A:Type_II_DNA_topoisomerase; title=CRYO-EM STRUCTURE OF THE HUMAN TOPOISOMERASE II ALPHA DNA- BINDING/CLEAVAGE DOMAIN IN STATE 1 organism=? DNA sequence DG(C10):DC(D8) DA(C11):DT(D7) DT(C12):DA(D6) DG(C13):DC(D5) DC(F1):DG(D4) DG(F2):DC(D3) DC(F3):DG(D2) DG(F4):DC(D1) DC(F5):DG(E13) DA(F6):DT(E12) DT(F7):DA(E11) DC(F8):DG(E10) DG(F9):DC(E9) DT(F10):DA(E8) DC(F11):DG(E7) DA(F12):DT(E6) DT(F13):DA(E5) DC(F14):DG(E4) DC(F15):DG(E3) DT(F16):DA(E2) DC(F17):DG(E1) DG(C1):DC(D17) DA(C2):DT(D16) DG(C3):DC(D15) DG(C4):DC(D14) DA(C5):DT(D13) DT(C6):DA(D12) DG(C7):DC(D11) DA(C8):DT(D10) chainA ( 57) LYS489 0 1 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) MET762 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) SER763 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) MET766 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) ILE856 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nrikgipklddandaggrnstectliltegdsaktlavsglgvvgrdkygvfplrgKilnvreashkqimenaeinniikivglqykknyededslktlrygkimimtdqdqdgshikgllinfihhnwpsllrhrfleefitpivkvsknkqemafyslpefeewksstpnhkkwkvkyykglgtstskeakeyfadmkrhriqfkysgpeddaaislafskkqiddrkewltnfmedrrqrkllglpedylygqtttyltyndfinkelilfsnsdnersipsmvdglkpgqrkvlftcfkrndkrevkvaqlagsvaemssyhhgeMSlmMtiinlaqnfvgsnnlnllqpigqfgtrlhggkdsaspryiftmlsslarllfppkddhtlkflyddnqrvepewyipiipmvlingaegIgtgwsckipnfdvreivnnirrlmdgeeplpmlpsyknfkgtieelapnqyvisgevailnsttieiselpvrtwtqtykeqvlepmlngtektpplitdyreyhtdttvkfvvkmteeklaeaervglhkvfklqtsltcnsmvlfdhvgclkkydtvldilrdffelrlkyyglrkewllgmlgaesaklnnqarfilekidgkiiienkpkkelikvliqrgydsdpvkawkeaqqkvsgptfnylldmplwyltkekkdelcrlrnekeqeldtlkrkspsdlwkedlatfieeleaveakekqdeqvglpgkggkakgkktqmaevlpspr >6zy5_AB:Type_II_DNA_topoisomerase;ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase;Ribosomal_protein_S5_domain_2-like; title=CRYO-EM STRUCTURE OF THE HUMAN TOPOISOMERASE II ALPHA DNA- BINDING/CLEAVAGE DOMAIN IN STATE 1 organism=? DNA sequence DG(C10):DC(D8) DA(C11):DT(D7) DT(C12):DA(D6) DG(C13):DC(D5) DC(F1):DG(D4) DG(F2):DC(D3) DC(F3):DG(D2) DG(F4):DC(D1) DC(F5):DG(E13) DA(F6):DT(E12) DT(F7):DA(E11) DC(F8):DG(E10) DG(F9):DC(E9) DT(F10):DA(E8) DC(F11):DG(E7) DA(F12):DT(E6) DT(F13):DA(E5) DC(F14):DG(E4) DC(F15):DG(E3) DT(F16):DA(E2) DC(F17):DG(E1) DG(C1):DC(D17) DA(C2):DT(D16) DG(C3):DC(D15) DG(C4):DC(D14) DA(C5):DT(D13) DT(C6):DA(D12) DG(C7):DC(D11) DA(C8):DT(D10) chainB ( 57) LYS489 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) MET762 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) SER763 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) MET766 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (422) GLU854 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) ILE856 0 0 0 0 0 0 0 0 0 0 0 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) SER861 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 57) LYS489 0 1 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) MET762 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) SER763 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) MET766 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) ILE856 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nrikgipklddandaggrnstectliltegdsaktlavsglgvvgrdkygvfplrgKilnvreashkqimenaeinniikivglqykknyededslktlrygkimimtdqdqdgshikgllinfihhnwpsllrhrfleefitpivkvsknkqemafyslpefeewksstpnhkkwkvkyykglgtstskeakeyfadmkrhriqfkysgpeddaaislafskkqiddrkewltnfmedrrqrkllglpedylygqtttyltyndfinkelilfsnsdnersipsmvdglkpgqrkvlftcfkrndkrevkvaqlagsvaemssyhhgeMSlmMtiinlaqnfvgsnnlnllqpigqfgtrlhggkdsaspryiftmlsslarllfppkddhtlkflyddnqrvepewyipiipmvlingaegIgtgwsckipnfdvreivnnirrlmdgeeplpmlpsyknfkgtieelapnqyvisgevailnsttieiselpvrtwtqtykeqvlepmlngtektpplitdyreyhtdttvkfvvkmteeklaeaervglhkvfklqtsltcnsmvlfdhvgclkkydtvldilrdffelrlkyyglrkewllgmlgaesaklnnqarfilekidgkiiienkpkkelikvliqrgydsdpvkawkeaqqkvsgptfnylldmplwyltkekkdelcrlrnekeqeldtlkrkspsdlwkedlatfieeleaveakekqdeqvglpgkggkakgkktqmaevlpspr/nrikgipklddandaggrnstectliltegdsaktlavsglgvvgrdkygvfplrgKilnvreashkqimenaeinniikivglqykknyededslktlrygkimimtdqdqdgshikgllinfihhnwpsllrhrfleefitpivkvsknkqemafyslpefeewksstpnhkkwkvkyykglgtstskeakeyfadmkrhriqfkysgpeddaaislafskkqiddrkewltnfmedrrqrkllglpedylygqtttyltyndfinkelilfsnsdnersipsmvdglkpgqrkvlftcfkrndkrevkvaqlagsvaemssyhhgeMSlmMtiinlaqnfvgsnnlnllqpigqfgtrlhggkdsaspryiftmlsslarllfppkddhtlkflyddnqrvepewyipiipmvlingaEgIgtgwSckipnfdvreivnnirrlmdgeeplpmlpsyknfkgtieelapnqyvisgevailnsttieiselpvrtwtqtykeqvlepmlngtektpplitdyreyhtdttvkfvvkmteeklaeaervglhkvfklqtsltcnsmvlfdhvgclkkydtvldilrdffelrlkyyglrkewllgmlgaesaklnnqarfilekidgkiiienkpkkelikvliqrgydsdpvkawkeaqqkvsgptfnylldmplwyltkekkdelcrlrnekeqeldtlkrkspsdlwkedlatfieeleaveakekqdeqvglpgkggkakgkktqmaevlpspr >6zy6_A:Type_II_DNA_topoisomerase; title=CRYO-EM STRUCTURE OF THE HUMAN TOPOISOMERASE II ALPHA DNA- BINDING/CLEAVAGE DOMAIN IN STATE 2 organism=? DNA sequence DC(D5):DG(C13) DA(D6):DT(C12) DT(D7):DA(C11) DC(D8):DG(C10) DG(D9):DC(C9) DT(D10):DA(C8) DC(D11):DG(C7) DA(D12):DT(C6) DT(D13):DA(C5) DC(D14):DG(C4) DC(D15):DG(C3) DT(D16):DA(C2) DC(D17):DG(C1) chainA ( 57) LYS489 7 9 2 0 0 0 0 0 0 0 0 0 0 (331) SER763 0 1 0 0 0 0 0 0 0 0 0 0 0 (334) MET766 0 2 0 0 0 0 0 0 0 0 0 0 0 (424) ILE856 0 0 0 19 12 0 0 0 0 0 0 0 0 prot.sequence nrikgipklddandaggrnstectliltegdsaktlavsglgvvgrdkygvfplrgKilnvreashkqimenaeinniikivglqykknyededslktlrygkimimtdqdqdgshikgllinfihhnwpsllrhrfleefitpivkvsknkqemafyslpefeewksstpnhkkwkvkyykglgtstskeakeyfadmkrhriqfkysgpeddaaislafskkqiddrkewltnfmedrrqrkllglpedylygqtttyltyndfinkelilfsnsdnersipsmvdglkpgqrkvlftcfkrndkrevkvaqlagsvaemssyhhgemSlmMtiinlaqnfvgsnnlnllqpigqfgtrlhggkdsaspryiftmlsslarllfppkddhtlkflyddnqrvepewyipiipmvlingaegIgtgwsckipnfdvreivnnirrlmdgeeplpmlpsyknfkgtieelapnqyvisgevailnsttieiselpvrtwtqtykeqvlepmlngtektpplitdyreyhtdttvkfvvkmteeklaeaervglhkvfklqtsltcnsmvlfdhvgclkkydtvldilrdffelrlkyyglrkewllgmlgaesaklnnqarfilekidgkiiienkpkkelikvliqrgydsdpvkawkeaqqkvsgptfnylldmplwyltkekkdelcrlrnekeqeldtlkrkspsdlwkedlatfieeleaveakekqdeqvglpgkggkakgkktqmaevlpspr >6zy7_AB:Type_II_DNA_topoisomerase;ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase;Ribosomal_protein_S5_domain_2-like; title=CRYO-EM STRUCTURE OF THE ENTIRE HUMAN TOPOISOMERASE II ALPHA IN STATE 1 organism=? DNA sequence DC(d5):DG(c30) DA(d6):DT(c29) DT(d7):DA(c28) DC(d8):DG(c27) DG(d9):DC(c26) DT(d10):DA(c25) DC(d11):DG(c24) DA(d12):DT(c23) DT(d13):DA(c22) DC(d14):DG(c21) DC(d15):DG(c20) DT(d16):DA(c19) DC(d17):DG(c18) DG(d18):DC(c17) DA(d19):DT(c16) DG(d20):DC(c15) DG(d21):DC(c14) DA(d22):DT(c13) DT(d23):DA(c12) DG(d24):DC(c11) DA(d25):DT(c10) DC(d26):DG(c9) DG(d27):DC(c8) DA(d28):DT(c7) DT(d29):DA(c6) DG(d30):DC(c5) chainB (457) LYS489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 (731) SER763 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (734) MET766 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (822) GLU854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (824) ILE856 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 (829) SER861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 chainA (456) LYS489 7 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (730) SER763 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (733) MET766 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (821) GLU854 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (823) ILE856 0 0 0 5 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sveriyqkktqlehillrpdtyigsvelvtqqmwvydedvginyrevtfvpglykifdeilvnaadnkqrdpkmscirvtidpennlisiwnngkgipvvehkvekmyvpalifgqlltssnydddekkvtggrngygaklcnifstkftvetasreykkmfkqtwmdnmgragemelkpfngedytcitfqpdlskfkmqsldkdivalmvrraydiagstkdvkvflngnklpvkgfrsyvdmylkdkldetgnslkviheqvnhrwevcltmsekgfqqisfvnsiatskggrhvdyvadqivtklvdvvkkknvkahqvknhmwifvnalienptfdsqtkenmtlqpksfgstcqlsekfikaaigcgivesilnwvkfkaqvqlnkkcsavkhnrikgipklddandaggrnstectliltegdsaktlavsglgvvgrdkygvfplrgKilnvreashkqimenaeinniikivglqykknyededslktlrygkimimtdqdqdgshikgllinfihhnwpsllrhrfleefitpivkvsknkqemafyslpefeewksstpnhkkwkvkyykglgtstskeakeyfadmkrhriqfkysgpeddaaislafskkqiddrkewltnfmedrrqrkllglpedylygqtttyltyndfinkelilfsnsdnersipsmvdglkpgqrkvlftcfkrndkrevkvaqlagsvaemssyhhgemSlmMtiinlaqnfvgsnnlnllqpigqfgtrlhggkdsaspryiftmlsslarllfppkddhtlkflyddnqrvepewyipiipmvlingaEgIgtgwsckipnfdvreivnnirrlmdgeeplpmlpsyknfkgtieelapnqyvisgevailnsttieiselpvrtwtqtykeqvlepmlngtektpplitdyreyhtdttvkfvvkmteeklaeaervglhkvfklqtsltcnsmvlfdhvgclkkydtvldilrdffelrlkyyglrkewllgmlgaesaklnnqarfilekidgkiiienkpkkelikvliqrgydsdpvkawkeaqqkvsgptfnylldmplwyltkekkdelcrlrnekeqeldtlkrkspsdlwkedlatfieeleaveakekqdeqvglpgkggkakgkktqmaevlpspr/sveriyqkktqlehillrpdtyigsvelvtqqmwvydedvginyrevtfvpglykifdeilvnaadnkqrdpkmscirvtidpennlisiwnngkgipvvehkvekmyvpalifgqlltssnydddekkvtggrngygaklcnifstkftvetasreykkmfkqtwmdnmgragemelkpfngedytcitfqpdlskfkmqsldkdivalmvrraydiagstkdvkvflngnklpvkgfrsyvdmylkdkldetgnslkviheqvnhrwevcltmsekgfqqisfvnsiatskggrhvdyvadqivtklvdvvkkknavkahqvknhmwifvnalienptfdsqtkenmtlqpksfgstcqlsekfikaaigcgivesilnwvkfkaqvqlnkkcsavkhnrikgipklddandaggrnstectliltegdsaktlavsglgvvgrdkygvfplrgKilnvreashkqimenaeinniikivglqykknyededslktlrygkimimtdqdqdgshikgllinfihhnwpsllrhrfleefitpivkvsknkqemafyslpefeewksstpnhkkwkvkyykglgtstskeakeyfadmkrhriqfkysgpeddaaislafskkqiddrkewltnfmedrrqrkllglpedylygqtttyltyndfinkelilfsnsdnersipsmvdglkpgqrkvlftcfkrndkrevkvaqlagsvaemssyhhgemSlmMtiinlaqnfvgsnnlnllqpigqfgtrlhggkdsaspryiftmlsslarllfppkddhtlkflyddnqrvepewyipiipmvlingaEgIgtgwSckipnfdvreivnnirrlmdgeeplpmlpsyknfkgtieelapnqyvisgevailnsttieiselpvrtwtqtykeqvlepmlngtektpplitdyreyhtdttvkfvvkmteeklaeaervglhkvfklqtsltcnsmvlfdhvgclkkydtvldilrdffelrlkyyglrkewllgmlgaesaklnnqarfilekidgkiiienkpkkelikvliqrgydsdpvkawkeaqqkvsgptfnylldmplwyltkekkdelcrlrnekeqeldtlkrkspsdlwkedlatfieeleaveakekqdeqvglpgkggkakgkktqmaevlpspr >6zy7_B:Type_II_DNA_topoisomerase;ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase;Ribosomal_protein_S5_domain_2-like; title=CRYO-EM STRUCTURE OF THE ENTIRE HUMAN TOPOISOMERASE II ALPHA IN STATE 1 organism=? DNA sequence DC(d5):DG(c30) DA(d6):DT(c29) DT(d7):DA(c28) DC(d8):DG(c27) DG(d9):DC(c26) DT(d10):DA(c25) DC(d11):DG(c24) DA(d12):DT(c23) DT(d13):DA(c22) DC(d14):DG(c21) DC(d15):DG(c20) DT(d16):DA(c19) DC(d17):DG(c18) DG(d18):DC(c17) DA(d19):DT(c16) DG(d20):DC(c15) DG(d21):DC(c14) DA(d22):DT(c13) DT(d23):DA(c12) DG(d24):DC(c11) DA(d25):DT(c10) DC(d26):DG(c9) DG(d27):DC(c8) DA(d28):DT(c7) DT(d29):DA(c6) DG(d30):DC(c5) chainB (457) LYS489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 (731) SER763 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (734) MET766 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (822) GLU854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (824) ILE856 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 (829) SER861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence sveriyqkktqlehillrpdtyigsvelvtqqmwvydedvginyrevtfvpglykifdeilvnaadnkqrdpkmscirvtidpennlisiwnngkgipvvehkvekmyvpalifgqlltssnydddekkvtggrngygaklcnifstkftvetasreykkmfkqtwmdnmgragemelkpfngedytcitfqpdlskfkmqsldkdivalmvrraydiagstkdvkvflngnklpvkgfrsyvdmylkdkldetgnslkviheqvnhrwevcltmsekgfqqisfvnsiatskggrhvdyvadqivtklvdvvkkknavkahqvknhmwifvnalienptfdsqtkenmtlqpksfgstcqlsekfikaaigcgivesilnwvkfkaqvqlnkkcsavkhnrikgipklddandaggrnstectliltegdsaktlavsglgvvgrdkygvfplrgKilnvreashkqimenaeinniikivglqykknyededslktlrygkimimtdqdqdgshikgllinfihhnwpsllrhrfleefitpivkvsknkqemafyslpefeewksstpnhkkwkvkyykglgtstskeakeyfadmkrhriqfkysgpeddaaislafskkqiddrkewltnfmedrrqrkllglpedylygqtttyltyndfinkelilfsnsdnersipsmvdglkpgqrkvlftcfkrndkrevkvaqlagsvaemssyhhgemSlmMtiinlaqnfvgsnnlnllqpigqfgtrlhggkdsaspryiftmlsslarllfppkddhtlkflyddnqrvepewyipiipmvlingaEgIgtgwSckipnfdvreivnnirrlmdgeeplpmlpsyknfkgtieelapnqyvisgevailnsttieiselpvrtwtqtykeqvlepmlngtektpplitdyreyhtdttvkfvvkmteeklaeaervglhkvfklqtsltcnsmvlfdhvgclkkydtvldilrdffelrlkyyglrkewllgmlgaesaklnnqarfilekidgkiiienkpkkelikvliqrgydsdpvkawkeaqqkvsgptfnylldmplwyltkekkdelcrlrnekeqeldtlkrkspsdlwkedlatfieeleaveakekqdeqvglpgkggkakgkktqmaevlpspr >6zy8_B:Type_II_DNA_topoisomerase;ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase;Ribosomal_protein_S5_domain_2-like; title=CRYO-EM STRUCTURE OF THE ENTIRE HUMAN TOPOISOMERASE II ALPHA IN STATE 2 organism=? DNA sequence DG(E1):DC(F17) DA(E2):DT(F16) DG(E3):DC(F15) DG(E4):DC(F14) DA(E5):DT(F13) DT(E6):DA(F12) DG(E7):DC(F11) DA(E8):DT(F10) DC(E9):DG(F9) DG(E10):DC(F8) DA(E11):DT(F7) DT(E12):DA(F6) DG(E13):DC(F5) chainB (454) ARG487 0 0 0 0 0 0 0 0 0 0 0 0 1 (456) LYS489 0 0 0 0 0 0 0 0 0 0 3 9 5 (730) SER763 0 0 0 0 0 0 0 0 0 0 0 2 0 (733) MET766 0 0 0 0 0 0 0 0 0 0 0 2 0 (823) ILE856 0 0 0 0 0 0 0 0 18 16 0 0 0 prot.sequence sveriyqkktqlehillrpdtyigsvelvtqqmwvydedvginyrevtfvpglykifdeilvnaadnkqrdpkmscirvtidpennlisiwnngkgipvvehkvekmyvpalifgqlltssnydddekkvtggrngygaklcnifstkftvetasreykkmfkqtwmdnmgragemelkpfngedytcitfqpdlskfkmqsldkdivalmvrraydiagstkdvkvflngnklpvkgfrsyvdmylkdkldetgnslkviheqvnhrwevcltmsekgfqqisfvnsiatskggrhvdyvadqivtklvdvvkkknvkahqvknhmwifvnalienptfdsqtkenmtlqpksfgstcqlsekfikaaigcgivesilnwvkfkaqvqlnkkcsavkhnrikgipklddandaggrnstectliltegdsaktlavsglgvvgrdkygvfplRgKilnvreashkqimenaeinniikivglqykknyededslktlrygkimimtdqdqdgshikgllinfihhnwpsllrhrfleefitpivkvsknkqemafyslpefeewksstpnhkkwkvkyykglgtstskeakeyfadmkrhriqfkysgpeddaaislafskkqiddrkewltnfmedrrqrkllglpedylygqtttyltyndfinkelilfsnsdnersipsmvdglkpgqrkvlftcfkrndkrevkvaqlagsvaemssyhhgemSlmMtiinlaqnfvgsnnlnllqpigqfgtrlhggkdsaspryiftmlsslarllfppkddhtlkflyddnqrvepewyipiipmvlingaegIgtgwsckipnfdvreivnnirrlmdgeeplpmlpsyknfkgtieelapnqyvisgevailnsttieiselpvrtwtqtykeqvlepmlngtektpplitdyreyhtdttvkfvvkmteeklaeaervglhkvfklqtsltcnsmvlfdhvgclkkydtvldilrdffelrlkyyglrkewllgmlgaesaklnnqarfilekidgkiiienkpkkelikvliqrgydsdpvkawkeaqqkvsgptfnylldmplwyltkekkdelcrlrnekeqeldtlkrkspsdlwkedlatfieeleaveakekqdeqvglpgkggkakgkktqmaevlpspr >6zz6_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF S.CEREVISIAE COHESIN-SCC2-DNA COMPLEX organism=? DNA sequence DT(G1):DA(F34) DT(G2):DA(F33) DT(G3):DA(F32) DT(G4):DA(F31) DT(G5):DA(F30) DT(G6):DA(F29) DT(G7):DA(F28) DT(G8):DA(F27) DT(G9):DA(F26) DT(G10):DA(F25) DT(G11):DA(F24) DT(G12):DA(F23) DT(G13):DA(F22) DT(G14):DA(F21) DT(G15):DA(F20) DT(G16):DA(F19) DT(G17):DA(F18) DT(G18):DA(F17) DT(G19):DA(F16) DT(G20):DA(F15) DT(G21):DA(F14) DT(G22):DA(F13) DT(G23):DA(F12) DT(G24):DA(F11) DT(G25):DA(F10) DT(G26):DA(F9) DT(G27):DA(F8) DT(G28):DA(F7) DT(G29):DA(F6) DT(G30):DA(F5) DT(G31):DA(F4) DT(G32):DA(F3) DT(G33):DA(F2) DT(G34):DA(F1) chainA (100) ASP116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence grlvglelsnfksyrgvtkvgfgesnftsiigpngsgksnmmdaisfvlgvrsnhlrsnilkdliyrgvlsnpqsayvkafyqkgnklvelmriisrngDtsykidgktvsykdysiflenenilikaknflvfqgdveqiaaqspvelsrmfeevsgsiqykkeyeelkekieklsksaeekkilnqflkikkkrkelfektfdyvsdhldaiyreltknpnsnvelaggnasltiededepfnagikyhatpplkrfkdmeylsggektvaalallfainsyqpspffvldqvdaalditnvqriaayirrhrnpdlqfivislkntmfeksdalvgvyrqqqensskiitldlsnya >6zz6_ABD:P-loop_containing_nucleoside_triphosphate_hydrolases;ARM_repeat; title=CRYO-EM STRUCTURE OF S.CEREVISIAE COHESIN-SCC2-DNA COMPLEX organism=? DNA sequence DA(F1):DT(G34) DA(F2):DT(G33) DA(F3):DT(G32) DA(F4):DT(G31) DA(F5):DT(G30) DA(F6):DT(G29) DA(F7):DT(G28) DA(F8):DT(G27) DA(F9):DT(G26) DA(F10):DT(G25) DA(F11):DT(G24) DA(F12):DT(G23) DA(F13):DT(G22) DA(F14):DT(G21) DA(F15):DT(G20) DA(F16):DT(G19) DA(F17):DT(G18) DA(F18):DT(G17) DA(F19):DT(G16) DA(F20):DT(G15) DA(F21):DT(G14) DA(F22):DT(G13) DA(F23):DT(G12) DA(F24):DT(G11) DA(F25):DT(G10) DA(F26):DT(G9) DA(F27):DT(G8) DA(F28):DT(G7) DA(F29):DT(G6) DA(F30):DT(G5) DA(F31):DT(G4) DA(F32):DT(G3) DA(F33):DT(G2) DA(F34):DT(G1) chainA (100) ASP116 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainD prot.sequence grlvglelsnfksyrgvtkvgfgesnftsiigpngsgksnmmdaisfvlgvrsnhlrsnilkdliyrgvlsnpqsayvkafyqkgnklvelmriisrngDtsykidgktvsykdysiflenenilikaknflvfqgdveqiaaqspvelsrmfeevsgsiqykkeyeelkekieklsksaeekkilnqflkikkkrkelfektfdyvsdhldaiyreltknpnsnvelaggnasltiededepfnagikyhatpplkrfkdmeylsggektvaalallfainsyqpspffvldqvdaalditnvqriaayirrhrnpdlqfivislkntmfeksdalvgvyrqqqensskiitldlsnya/gpyikrviikgfktyrnetiidnfsphqnviigsngsgksnffaairfvlsddysnlkreerqglihqgsggsvmsasveivfhdpdhsmilpsgvlsrGddevtirrtvglkkddyqlndrnvtkgdivrmletagfsmnnpynivpqgkivaltnakdkerlqlledvvgaksfevklkaslkkmeeteqkkiqinkemgelnsklsemeqerkelekynelernrkrafenfkkfnerrkdlaeraseldeskdsiqdlivklkqqkvnavdstfqkvsenfeavferlvprgtakliihrytgvsisvsfnskqneqlhveqlsggqktvcaialilaiqmvdpasfylfdqidaaldkqyrtavatllkelsknaqficttfrtdmlqvadkffrvkyenkistvievnreeaigfir/ttncltklqmtiknitllrlldvmvcnikryiallstivlfniesyimepvnflsdlieslkdtfqealellpkyirngpflddnvtaklvyifsdllmNsfwdnvkrissdilvslfgsfdqqrgfiieellshieklptkriqkklrkvqniyitdftftlmsmlenincysfcnqmnidllkneykkqeeflfnivehindtilerffknpsalryvidnfvqdllllisspqwpvtekilssllkrllsvyspsmqvsanieticlqlignigstifdikcstrdhednnlitlphffksfeeciaynetikcrrsatrflwnlrlgtiliitvdnelkkileqikstikldyfsilhafellnlydpylklilsllakdkiklrstaikclsmlaskdkvilsnpmvketihrrlndssasvkdaildlvsinssyfefyqqinnnynddsimvrkhvlrinekmydetndivtkvyviarilmkiedeedniidmarlillnrwilkvhevldqpeklkeisssvllvmsrvaimnekcsqlfdlflnfyllnkeahskeaydkithvltiltdflvqkivelnivdkqnflnllakfadstvsfltkdhitalypymvsdsdfhyyilqvfrctfeklanfkqkflydlettllsrlpkmnvreideampliwsvathrhdtarvakacssclshlhpyinkangklqrliylstgfarfcfpkgetlyehitkcllvlskdkithvirrvavknltklcgnhpklfnsrhvlhlldkefqsdqldiklvileslydlflleerksvrntgvnstlssngvcsalatrfldnilqlcllrdlknslvairllklilkfgytnpshsiptvialfastsqyirhvayelledlfekyetlvfsslsrgvtkaihysihtdekyyykhdhflslleklcgtgkkngpkffkvlkrimqsylvqksifvlctnisnitfvsqydlvsllktidlttdrlkevimdelsgiiliqlslqdlgtyllhlyeselknkqfsaqlenieq >7abs_A:Metallo-hydrolase/oxidoreductase; title=STRUCTURE OF HUMAN DCLRE1C/ARTEMIS IN COMPLEX WITH DNA - RE- EVALUATION OF 6WO0 organism=Homo sapiens DNA sequence DC(B6):DG(E2) DT(B7):DA(E1) chainA (205) LYS207 0 16 prot.sequence sfegqmaeyptisidrfdrenlrarayflshchkdhmkglraptlkrrlecslkvylycspvtkellltspkyrfwkkriisieietptqislvdeasgekeeivvtllpaghcpgsvmflfqgnngtvlytgdfrlaqgeaarmellhsggrvkdiqsvyldttfcdprfyqipsreeclsgvlelvrswitrspyhvvwlncKaaygyeylftnlseelgvqvhvnkldmfrnmpeilhhlttdrntqihacrhpkaeeyfqwsklpcgitsrnriplhiisikpstmwfgersrktnvivrtgessyracfsfhssyseikdflsylcpvnaypnvipvgttmdkvveilkplcrs >7ad8_ABG: title=CORE TFIIH-XPA-DNA COMPLEX WITH MODELLED P62 SUBUNIT organism=HOMO SAPIENS DNA sequence DC(J20):DA(K30) DT(J21):DA(K29) DG(J22):DC(K28) DC(J23):DG(K27) DG(J24):DC(K26) DA(J25):DT(K25) DG(J26):DC(K24) DC(J27):DG(K23) DT(J28):DA(K22) DC(J29):DG(K21) DG(J30):DC(K20) DA(J31):DT(K19) DA(J32):DT(K18) DT(J33):DA(K17) DT(J34):DA(K16) chainA (473) LYS609 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 (493) HIS629 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 chainB (633) ARG686 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG prot.sequence htsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqissHggsrrqeaqrlgrvlrynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/mklnvdgllvyfpydyiypeqfsymrelkrtldakghgvlempsgtgktvsllalimayqrayplevtkliycsrtvpeiekvieelrkllnfyekqegeklpflglalssrknlcihpevtplrfgkdvdgkchsltasyvraqyqhdtslphcrfyeefdahgrevplpagiynlddlkalgrrqgwcpyflarysilhanvvvysyhylldpkiadlvskelarkavvvfdeahnidnvcidsmsvnltrrtldrcqgnletlqktvlraehflgflrrlleyvkwrlrvqhvvqesppaflsglaqrvciqrkplrfcaerlrsllhtleitdladfspltllanfatlvstyakgftiiiepfddrtptianpilhfscmdaslaikpvferfqsviitsgtlspldiypkildfhpvtmatftmtlarvclcpmiigrgndqvaisskfetrediavirnygnlllemsavvpdgivafftsyqymestvaswyeqgileniqrnkllfietqdgaetsvalekyqeacengrgaillsvargkvsegidfvhhygravimfgvpyvytqsrilkarleylrdqfqirendfltfdamrhaaqcvgrairgktdyglmvfadkrfaRgdkrgklprwiqehltdanlnltvdegvqvakyflrqmaqpf/iceecgkefmdsylmnhfdlptcdncrdaddkhklitkteakqeyllkdcdlekrepplkfivkknphhsqwgdmklylklqivkrslevwgsqealeeakevrqenrekmkqkkfdkkvkelrravrssvwkr >7adb_X:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=TRANSCRIPTION TERMINATION INTERMEDIATE COMPLEX 1 DELTA NUSG organism=? DNA sequence DT(L-12):DA(K12) DA(L-11):DT(K11) DT(L-10):DA(K10) DC(L-9):DG(K9) DC(L-8):DG(K8) DG(L-7):DC(K7) DC(L-6):DG(K6) DT(L-5):DA(K5) DC(L-4):DG(K4) DA(L-3):DT(K3) DC(L-2):DG(K2) DA(L-1):DT(K1) DA(L0):DT(K0) DT(L1):DC(K-1) DG(L2):DA(K-2) DC(L3):DT(K-3) DC(L4):DC(K-11) DA(L5):DG(K-12) DC(L6):DA(K-13) DA(L7):DC(K-14) DC(L8):DG(K-15) DG(L9):DA(K-16) DC(L10):DG(K-17) DG(L11):DC(K-18) chainX (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (469) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 24 1 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynaRiipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtrERagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >7adc_Y:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=TRANSCRIPTION TERMINATION INTERMEDIATE COMPLEX 3 DELTA NUSG organism=ESCHERICHIA COLI DNA sequence DC(K-19):DC(L12) DC(K-18):DG(L11) DG(K-17):DC(L10) DA(K-16):DG(L9) DG(K-15):DC(L8) DC(K-14):DA(L7) DA(K-13):DC(L6) DG(K-12):DA(L5) DC(K-11):DC(L4) DT(K-3):DC(L3) DA(K-2):DG(L2) DC(K-1):DT(L1) DT(K0):DA(L0) DT(K1):DA(L-1) DG(K2):DC(L-2) DT(K3):DA(L-3) DG(K4):DC(L-4) DA(K5):DT(L-5) DG(K6):DC(L-6) DC(K7):DG(L-7) DG(K8):DC(L-8) DG(K9):DC(L-9) DA(K10):DT(L-10) DT(K11):DA(L-11) DA(K12):DT(L-12) chainY (197) THR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (240) LEU255 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG259 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG322 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkRplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7add_X:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=TRANSCRIPTION TERMINATION INTERMEDIATE COMPLEX IIIA organism=ESCHERICHIA COLI DNA sequence DC(K-19):DT(L13) DC(K-18):DC(L12) DG(K-17):DG(L11) DA(K-16):DC(L10) DG(K-15):DG(L9) DC(K-14):DC(L8) DA(K-13):DA(L7) DG(K-12):DC(L6) DC(K-11):DA(L5) DG(K-10):DC(L4) DT(K-9):DC(L3) DA(K-2):DG(L2) DC(K-1):DT(L1) DT(K0):DA(L0) DT(K1):DA(L-1) DG(K2):DC(L-2) DT(K3):DA(L-3) DG(K4):DC(L-4) DA(K5):DT(L-5) DG(K6):DC(L-6) DC(K7):DG(L-7) DG(K8):DC(L-8) DG(K9):DC(L-9) DA(K10):DT(L-10) DT(K11):DA(L-11) DA(K12):DT(L-12) chainX (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) GLU504 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) PHE514 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1272) MET1273 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkEffgssqlsqFmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgeMevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >7ade_bf: title=TRANSCRIPTION TERMINATION COMPLEX IVA organism=ESCHERICHIA COLI DNA sequence DT(L-10) DC(L-9) DC(L-8) DG(L-7) DC(L-6) DT(L-5) DC(L-4) DA(L-3) DC(L-2) DA(L-1) DA(L0) DT(L1) DG(L2) DC(L3) DC(L4) DA(L5) DC(L6) DA(L7) DC(L8) DG(L9) DC(L10) DT(L16) DC(L17) DG(L18) DG(L19) DC(L20) DC(L21) DG(L22) DT(L23) DT(L24) DA(L25) DT(L26) DT(L27) DC(L28) DG(L29) DC(L30) DA(L31) chainf ( 87) ARG87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 chainb prot.sequence mnltelkntpvselitlgenmglenlarmrkqdiifailkqhaksgedifgdgvleilqdgfgflrsadssylagpddiyvspsqirrfnlrtgdtisgkirppkegeryfallkvnevnfdkpenarnkilfenltplhansrlrmergngstedltarvldlaspigrgqrglivappkagktmllqniaqsiaynhpdcvlmvlliderpeevtemqrlvkgevvastfdepasrhvqvaemviekakrlvehkkdviilldsitrlarayntvvpasgkvltggvdanalhrpkrffgaarnveeggsltiiatalidtgskmdeviyeefkgtgnmelhlsrkiaekrvfpaidynrsgtrkeellttqeelqkmwilrkiihpmgeidameflinklamtktnddffemmk/mnltelkntpvselitlgenmglenlarmrkqdiifailkqhaksgedifgdgvleilqdgfgflrsadssylagpddiyvspsqiRrfnlrtgdtisgkirppkegeryfallkvnevnfdkpenarnkilfenltplhansrlrmergngstedltarvldlaspigrgqrglivappkagktmllqniaqsiaynhpdcvlmvlliderpeevtemqrlvkgevvastfdepasrhvqvaemviekakrlvehkkdviilldsitrlarayntvvpasgkvltggvdanalhrpkrffgaarnveeggsltiiatalidtgskmdeviyeefkgtgnmelhlsrkiaekrvfpaidynrsgtrkeellttqeelqkmwilrkiihpmgeidameflinklamtktnddffemmk >7adu_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI XZ440 (COMPOUND 5J) organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (104) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (106) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (207) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (213) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (214) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 7 12 8 3 (251) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence daeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >7adv_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI XZ447 (COMPOUND 6V) organism=HUMAN SPUMARETROVIRUS DNA sequence DT(D1):DA(C19) DG(D2):DC(C18) DC(D3):DG(C17) DG(D4):DC(C16) DA(D5):DT(C15) DA(D6):DT(C14) DA(D7):DT(C13) DT(D8):DA(C12) DT(D9):DA(C11) DC(D10):DG(C10) DC(D11):DG(C9) DA(D12):DT(C8) DT(D13):DA(C7) DG(D14):DC(C6) DA(D15):DT(C5) DC(D16):DG(C4) chainA (104) ILE112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (106) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (207) GLN215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (213) GLU221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (214) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 7 12 10 3 (251) PRO259 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence daeldqllqghyikgypkqytyfledgkvkvsrpegvkiippqsdrqkivlqahnlahtgreatllkianlywwpnmrkdvvkqlgrcqqclitnasnkasgpIlRpdrpqkpfdkffidyigplppsqgylyvlvvvdgmtgftwlyptkapstsatvkslnvltsiaipkvihsdqgaaftsstfaewakergihlefstpyhpQssgkvERknsdikrlltkllvgrptkwydllpvvqlalnntysPvlkytphqllfgidsntpfanqdtldltreeelsllqeirtslyhpstppassrswspvvgqlvqervarpaslrprwhkpstvlkvlnprtvvildhlgnnrtvsidnlkptshq >7ae1_ABE: title=CRYO-EM STRUCTURE OF HUMAN RNA POLYMERASE III ELONGATION COMPLEX 1 organism=HOMO SAPIENS DNA sequence DT(T4):DA(S43) DT(T5):DA(S42) DA(T6):DT(S41) DA(T7):DT(S40) DG(T8):DC(S39) DT(T9):DA(S38) DG(T10):DC(S37) DG(T11):DC(S36) DA(T12):DT(S35) DG(T13):DC(S34) DC(T14):DG(S33) DT(T15):DA(S32) DG(T16):DC(S31) DG(T17):DC(S30) DA(T18):DT(S29) chainA (1296) ARG1305 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainB (178) ARG195 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 chainE prot.sequence keqfretdvakkishicfgmkspeemrqqahiqvvsknlysqdnqhapllygvldhrmgtsekdrpcetcgknladclghygyidlelpcfhvgyfravigilqmicktcchimlsqeekkqfldylkrpgltylqkrglkkkisdkcrkknichhcgafngtvkkcgllkiihekyktnkkvvdpivsnflqsfetaiehnkevepllgraqenlnplvvlnlfkripaedvplllmnpeagkpsdliltrllvpplcirpsvvneddltmklteiiflndvikkhrisgaktqmimedwdflqlqcalyinselsgiplnmapkkwtrgfvqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlridevavpvhvakiltfpekvnkaninflrklvqngpevhpganfiqqrhtqmkrflkygnrekmaqelkygdiverhlidgdvvlfnrqpslhklsimahlarvkphrtfrfnecvctpynadfdgdemnlhlpqteeakaealvlmgtkanlvtprngepliaaiqdfltgaylltlkdtffdrakacqiiasilvgkdekikvrlppptilkpvtlwtgkqifsvilrpsddnpvranlrtkgkqycgkgedlcandsyvtiqnselmsgsmdkgtlgsgsknnifyillrdwgqneaadamsrlarlapvylsnrgfsigigdvtpgqgllkakyellnagykkcdeyiealntgklqqqpgctaeetlealilkelsvirdhagsaclreldksnspltmalcgskgsfinisqmiacvgqqaisgsrvpdgfenrslphfekhsklpaakgfvansfysgltptefffhtmagreglvdtavktaetgymqrrlvksledlcsqydltvrsstgdiiqfiyggdgldpaamegkdeplefkrvldnikavfpcpsepalsknelilttesimkkseflccqdsflqeikkfikgvsekikktrdkygindngtteprvlyqldritptqvekfletcrdkymraqmepgsavgalcaqsigepgtqmtlktfhfagvasmnitlgvprikeiinaskaistpiitaqldkdddadyarlvkgriektllgeiseyieevflpddcfilvklslerirllrlevnaetvrysictsklrvkpgdvavhgeavvcvtprenskssmyyvlqflkedlpkvvvqgipevsravihideqsgkekykllvegdnlravmathgvkgtrttsnntyevektlgieaarttiineiqytmvnhgmsidrrhvmllsdlmtykgevlgitRfglakmkesvlmlasfektadhlfdaayfgqkdsvcgvseciimgipmnigtglfkllhkadrdpnppkrplifdtnefhiplvt/apiptveekwrllpaflkvkglvkqhidsfnyfinveikkimkanekvtsdadpmwylkylniyvglpdveesfnvtrpvsphecrlrdmtysapitvdieytrgsqriirnalpigrmpimlrssncvltgktpaefaklnecpldpggyfivkgvekviliqeqlsknriiveadRkgavgasvtssthekksrtnmavkqgrfylrhntlsedipiviifkamgvesdqeivqmigteehvmaafgpsleecqkaqiftqmqalkyignkvrrqktkieearellastilthvpvkefnfrakciytavmvrrvilaqgdnkvddrdyygnkrlelagqllsllfedlfkkfnsemkkiadqvipkqraaqfdvvkhmrqdqitngmvnaistgnwslkrfkmdrqgvtqvlsrlsyisalgmmtrissqfektrkvsgprslqpsqwgmlcpsdtpegeacglvknlalmthittdmedgpivklasnlgvedvnllcgeelsypnvflvflngnilgvirdhkklvntfrlmrragyinefvsistnltdrcvyissdggrlcrpyiivkkqkpavtnkhmeelaqgyrnfedflheslveyldvneendcnialyehtinkdtthleiepftllgvcaglipyphhnqsprntyqcamgkqamgtigynqrnridtlmyllaypqkpmvktktieliefeklpagqnatvavmsysgydiedalvlnkasldrgfgrclvyknakctlkrytnqtfdkvmgpmldaatrkpiwrheildadgicspgekvenkqvlvnksmptvtqqpqykdvpitykgatdsyiekvmissnaedaflikmllrqtrrpeigdkfssrhgqkgvcglivpqedmpfcdsgicpdiimnphgfpsrmtvgkliellagkagvldgrfhygtafggskvkdvcedlvrhgynylgkdyvtsgitgepleayiyfgpvyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcligygasmlllerlmissdafevdvcgqcgllgysgwchycksschvsslripyackllfqelqsmniiprlklskyn/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqsgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpVaryfgikrgqvvkiirpsetagryityrlvq >7ae1_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF HUMAN RNA POLYMERASE III ELONGATION COMPLEX 1 organism=HOMO SAPIENS DNA sequence DT(T4):DA(S43) DT(T5):DA(S42) DA(T6):DT(S41) DA(T7):DT(S40) DG(T8):DC(S39) DT(T9):DA(S38) DG(T10):DC(S37) DG(T11):DC(S36) DA(T12):DT(S35) DG(T13):DC(S34) DC(T14):DG(S33) DT(T15):DA(S32) DG(T16):DC(S31) DG(T17):DC(S30) DA(T18):DT(S29) chainB (178) ARG195 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence apiptveekwrllpaflkvkglvkqhidsfnyfinveikkimkanekvtsdadpmwylkylniyvglpdveesfnvtrpvsphecrlrdmtysapitvdieytrgsqriirnalpigrmpimlrssncvltgktpaefaklnecpldpggyfivkgvekviliqeqlsknriiveadRkgavgasvtssthekksrtnmavkqgrfylrhntlsedipiviifkamgvesdqeivqmigteehvmaafgpsleecqkaqiftqmqalkyignkvrrqktkieearellastilthvpvkefnfrakciytavmvrrvilaqgdnkvddrdyygnkrlelagqllsllfedlfkkfnsemkkiadqvipkqraaqfdvvkhmrqdqitngmvnaistgnwslkrfkmdrqgvtqvlsrlsyisalgmmtrissqfektrkvsgprslqpsqwgmlcpsdtpegeacglvknlalmthittdmedgpivklasnlgvedvnllcgeelsypnvflvflngnilgvirdhkklvntfrlmrragyinefvsistnltdrcvyissdggrlcrpyiivkkqkpavtnkhmeelaqgyrnfedflheslveyldvneendcnialyehtinkdtthleiepftllgvcaglipyphhnqsprntyqcamgkqamgtigynqrnridtlmyllaypqkpmvktktieliefeklpagqnatvavmsysgydiedalvlnkasldrgfgrclvyknakctlkrytnqtfdkvmgpmldaatrkpiwrheildadgicspgekvenkqvlvnksmptvtqqpqykdvpitykgatdsyiekvmissnaedaflikmllrqtrrpeigdkfssrhgqkgvcglivpqedmpfcdsgicpdiimnphgfpsrmtvgkliellagkagvldgrfhygtafggskvkdvcedlvrhgynylgkdyvtsgitgepleayiyfgpvyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcligygasmlllerlmissdafevdvcgqcgllgysgwchycksschvsslripyackllfqelqsmniiprlklskyn >7aea_ABE: title=CRYO-EM STRUCTURE OF HUMAN RNA POLYMERASE III ELONGATION COMPLEX 2 organism=HOMO SAPIENS DNA sequence DT(S29):DA(T18) DC(S30):DG(T17) DC(S31):DG(T16) DA(S32):DT(T15) DG(S33):DC(T14) DC(S34):DG(T13) DT(S35):DA(T12) DC(S36):DG(T11) DC(S37):DG(T10) DA(S38):DT(T9) DC(S39):DG(T8) DT(S40):DA(T7) DT(S41):DA(T6) DA(S42):DT(T5) DA(S43):DT(T4) chainA (1296) ARG1305 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence keqfretdvakkishicfgmkspeemrqqahiqvvsknlysqdnqhapllygvldhrmgtsekdrpcetcgknladclghygyidlelpcfhvgyfravigilqmicktcchimlsqeekkqfldylkrpgltylqkrglkkkisdkcrkknichhcgafngtvkkcgllkiihekyktnkkvvdpivsnflqsfetaiehnkevepllgraqenlnplvvlnlfkripaedvplllmnpeagkpsdliltrllvpplcirpsvvneddltmklteiiflndvikkhrisgaktqmimedwdflqlqcalyinselsgiplnmapkkwtrgfvqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlridevavpvhvakiltfpekvnkaninflrklvqngpevhpganfiqqrhtqmkrflkygnrekmaqelkygdiverhlidgdvvlfnrqpslhklsimahlarvkphrtfrfnecvctpynadfdgdemnlhlpqteeakaealvlmgtkanlvtprngepliaaiqdfltgaylltlkdtffdrakacqiiasilvgkdekikvrlppptilkpvtlwtgkqifsvilrpsddnpvranlrtkgkqycgkgedlcandsyvtiqnselmsgsmdkgtlgsgsknnifyillrdwgqneaadamsrlarlapvylsnrgfsigigdvtpgqgllkakyellnagykkcdeyiealntgklqqqpgctaeetlealilkelsvirdhagsaclreldksnspltmalcgskgsfinisqmiacvgqqaisgsrvpdgfenrslphfekhsklpaakgfvansfysgltptefffhtmagreglvdtavktaetgymqrrlvksledlcsqydltvrsstgdiiqfiyggdgldpaamegkdeplefkrvldnikavfpcpsepalsknelilttesimkkseflccqdsflqeikkfikgvsekikktrdkygindngtteprvlyqldritptqvekfletcrdkymraqmepgsavgalcaqsigepgtqmtlktfhfagvasmnitlgvprikeiinaskaistpiitaqldkdddadyarlvkgriektllgeiseyieevflpddcfilvklslerirllrlevnaetvrysictsklrvkpgdvavhgeavvcvtprenskssmyyvlqflkedlpkvvvqgipevsravihideqsgkekykllvegdnlravmathgvkgtrttsnntyevektlgieaarttiineiqytmvnhgmsidrrhvmllsdlmtykgevlgitRfglakmkesvlmlasfektadhlfdaayfgqkdsvcgvseciimgipmnigtglfkllhkadrdpnppkrplifdtnefhiplvt/apiptveekwrllpaflkvkglvkqhidsfnyfinveikkimkanekvtsdadpmwylkylniyvglpdveesfnvtrpvsphecrlrdmtysapitvdieytrgsqriirnalpigrmpimlrssncvltgktpaefaklnecpldpggyfivkgvekviliqeqlsknriiveadrkgavgasvtssthekksrtnmavkqgrfylrhntlsedipiviifkamgvesdqeivqmigteehvmaafgpsleecqkaqiftqmqalkyignkvrrqktkieearellastilthvpvkefnfrakciytavmvrrvilaqgdnkvddrdyygnkrlelagqllsllfedlfkkfnsemkkiadqvipkqraaqfdvvkhmrqdqitngmvnaistgnwslkrfkmdrqgvtqvlsrlsyisalgmmtrissqfektrkvsgprslqpsqwgmlcpsdtpegeacglvknlalmthittdmedgpivklasnlgvedvnllcgeelsypnvflvflngnilgvirdhkklvntfrlmrragyinefvsistnltdrcvyissdggrlcrpyiivkkqkpavtnkhmeelaqgyrnfedflheslveyldvneendcnialyehtinkdtthleiepftllgvcaglipyphhnqsprntyqcamgkqamgtigynqrnridtlmyllaypqkpmvktktieliefeklpagqnatvavmsysgydiedalvlnkasldrgfgrclvyknakctlkrytnqtfdkvmgpmldaatrkpiwrheildadgicspgekvenkqvlvnksmptvtqqpqykdvpitykgatdsyiekvmissnaedaflikmllrqtrrpeigdkfssrhgqkgvcglivpqedmpfcdsgicpdiimnphgfpsrmtvgkliellagkagvldgrfhygtafggskvkdvcedlvrhgynylgkdyvtsgitgepleayiyfgpvyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcligygasmlllerlmissdafevdvcgqcgllgysgwchycksschvsslripyackllfqelqsmniiprlklskyn/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqsgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >7ahx_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND D-ASPARTATE TENOFOVIR WITH BOUND MANGANESE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DDG(P822):DC(T706) chainA ( 95) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 (116) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (184) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 (185) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (357) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 3 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) GLN475 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >7ahx_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND D-ASPARTATE TENOFOVIR WITH BOUND MANGANESE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DDG(P822):DC(T706) chainA ( 95) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 (116) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (184) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 (185) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (357) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 3 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) GLN475 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddLyvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7ahx_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND D-ASPARTATE TENOFOVIR WITH BOUND MANGANESE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(F803):DG(E725) DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) MRG(F817):DC(E711) DC(F818):DG(E710) DG(F819):DC(E709) DC(F820):DG(E708) DC(F821):DG(E707) DDG(F822):DC(E706) chainC ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 (117) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (159) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 (186) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (450) ARG448 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7ai5_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTS IN SCANNING STATE organism=Escherichia coli DNA sequence DC(C12):DG(D89) DT(C13):DA(D88) DA(C14):DT(D87) DT(C15):DA(D86) DA(C16):DT(D85) DG(C17):DC(D84) DG(C18):DC(D83) DG(C19):DC(D82) DC(C20):DG(D81) DG(C21):DC(D80) DA(C22):DT(D79) DA(C23):DT(D78) DT(C24):DA(D77) DT(C25):DA(D76) DG(C26):DC(D75) DG(C27):DC(D74) DG(C28):DC(D73) DT(C29):DA(D72) DA(C30):DT(D71) DC(C31):DG(D70) DC(C32):DG(D69) DG(C33):DC(D68) chainA chainB (495) LYS496 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrmgdfyelfyddakrasqlldisltkrgasagepipmagipyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/saienfdahtpmmqqylrlkaqhpeillfyrmgdfyelfyddakrasqlldisltkrgasagepipmagipyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlKnaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >7ai5_B:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTS IN SCANNING STATE organism=Escherichia coli DNA sequence DC(C12):DG(D89) DT(C13):DA(D88) DA(C14):DT(D87) DT(C15):DA(D86) DA(C16):DT(D85) DG(C17):DC(D84) DG(C18):DC(D83) DG(C19):DC(D82) DC(C20):DG(D81) DG(C21):DC(D80) DA(C22):DT(D79) DA(C23):DT(D78) DT(C24):DA(D77) DT(C25):DA(D76) DG(C26):DC(D75) DG(C27):DC(D74) DG(C28):DC(D73) DT(C29):DA(D72) DA(C30):DT(D71) DC(C31):DG(D70) DC(C32):DG(D69) DG(C33):DC(D68) chainB (495) LYS496 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrmgdfyelfyddakrasqlldisltkrgasagepipmagipyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlKnaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >7ai6_A:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTS IN MISMATCH BOUND STATE organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(D22):DG(C40) DA(D23):DT(C39) DC(D24):DG(C38) DC(D25):DG(C37) DG(D26):DC(C36) DA(D27):DT(C35) DG(D28):DC(C34) DC(D29):DG(C33) DT(D30):DA(C32) DT(D31):DG(C31) DG(D32):DC(C30) DA(D33):DT(C29) DT(D34):DA(C28) DC(D35):DG(C27) DC(D36):DG(C26) DT(D37):DA(C25) DC(D38):DG(C24) DG(D39):DC(C23) DA(D40):DT(C22) DT(D41):DA(C21) DG(D42):DC(C20) DA(D43):DT(C19) DT(D44):DA(C18) DC(D45):DG(C17) DC(D46):DG(C16) chainA ( 32) MET33 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 0 0 74 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLU38 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR56 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 0 0 3 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) HIS74 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgDFyElfyddakrasqlldislTkRgasagepipMagiPyHavenylaklvnqgesvaiaeqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglsaagallqyakctqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldstvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytsptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawavaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >7ai6_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTS IN MISMATCH BOUND STATE organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(D22):DG(C40) DA(D23):DT(C39) DC(D24):DG(C38) DC(D25):DG(C37) DG(D26):DC(C36) DA(D27):DT(C35) DG(D28):DC(C34) DC(D29):DG(C33) DT(D30):DA(C32) DT(D31):DG(C31) DG(D32):DC(C30) DA(D33):DT(C29) DT(D34):DA(C28) DC(D35):DG(C27) DC(D36):DG(C26) DT(D37):DA(C25) DC(D38):DG(C24) DG(D39):DC(C23) DA(D40):DT(C22) DT(D41):DA(C21) DG(D42):DC(C20) DA(D43):DT(C19) DT(D44):DA(C18) DC(D45):DG(C17) DC(D46):DG(C16) chainA ( 32) MET33 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ASP35 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) PHE36 0 0 0 0 0 0 0 0 0 74 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLU38 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR56 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG58 0 0 0 0 0 0 0 3 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) MET68 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) PRO72 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) HIS74 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence saienfdahtpmmqqylrlkaqhpeillfyrMgDFyElfyddakrasqlldislTkRgasagepipMagiPyHavenylaklvnqgesvaiaeqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglsaagallqyakctqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldstvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytsptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgfmvemtetanilhnateyslvlmdeigrgtstydglslawavaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/saienfdahtpmmqqylrlkaqhpeillfyrMgDFyElfyddakrasqlldislTkRgasagepipMagiPyHavenylaklvnqgesvaiaeqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglsaagallqyakctqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldstvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytsptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgtfmvemtetanilhnateyslvlmdeigrgtstydglslawavaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >7ai7_A:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTS IN INTERMEDIATE STATE organism=? DNA sequence DC(D1):DG(C50) DT(D2):DA(C49) DT(D3):DA(C48) DA(D4):DT(C47) DG(D5):DC(C46) DT(D7):DA(C44) DT(D8):DA(C43) DA(D9):DT(C42) DG(D10):DC(C41) DG(D11):DC(C40) DA(D12):DT(C39) DT(D13):DA(C38) DC(D14):DG(C37) chainA ( 26) MET33 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) ASP35 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 29) PHE36 0 0 0 0 0 22 54 0 0 0 0 0 0 ( 31) GLU38 0 0 0 0 0 0 7 0 0 0 0 0 0 ( 51) ARG58 0 0 0 0 0 0 0 6 8 0 0 0 0 ( 61) MET68 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 65) PRO72 0 0 0 0 0 6 0 0 0 0 0 0 0 (354) ARG361 0 17 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dahtpmmqqylrlkaqhpeillfyrMgDFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtaRprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgaaddlasgrstfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklreles >7ai7_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTS IN INTERMEDIATE STATE organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(D1):DG(C50) DT(D2):DA(C49) DT(D3):DA(C48) DA(D4):DT(C47) DG(D5):DC(C46) DT(D7):DA(C44) DT(D8):DA(C43) DA(D9):DT(C42) DG(D10):DC(C41) DG(D11):DC(C40) DA(D12):DT(C39) DT(D13):DA(C38) DC(D14):DG(C37) chainA ( 26) MET33 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 28) ASP35 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 29) PHE36 0 0 0 0 0 22 54 0 0 0 0 0 0 ( 31) GLU38 0 0 0 0 0 0 7 0 0 0 0 0 0 ( 51) ARG58 0 0 0 0 0 0 0 6 8 0 0 0 0 ( 61) MET68 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 65) PRO72 0 0 0 0 0 6 0 0 0 0 0 0 0 (354) ARG361 0 17 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence dahtpmmqqylrlkaqhpeillfyrMgDFyElfyddakrasqlldisltkRgasagepipMagiPyhavenylaklvnqgesvaiceqigdpatskgpverkvvrivtpgtisdeallqerqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtaRprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgaaddlasgrstfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklreles/dnllaaiwqdskgfgyatldissgrFrLSePadretmaaelqrtnpaellYaedfaemslIegrRglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglcaagcllqyakdtqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldctvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqsHlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytcptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgaaddlasgrstfmvemtetanilhnateyslvlmdeigrgtstydglslawacaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklreles >7aib_ABC:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTS-MUTL IN CLAMP STATE organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(E11):DA(D40) DC(E12):DG(D39) DA(E13):DT(D38) DG(E14):DC(D37) DC(E15):DG(D36) DG(E16):DC(D35) DG(E17):DC(D34) DT(E18):DA(D33) DA(E19):DT(D32) DC(E20):DG(D31) DC(E21):DG(D30) DC(E22):DG(D29) DA(E23):DT(D28) DA(E24):DT(D27) DT(E25):DA(D26) DT(E26):DA(D25) DC(E27):DG(D24) DG(E28):DC(D23) DC(E29):DG(D22) DC(E30):DG(D21) DC(E31):DG(D20) DT(E32):DA(D19) DA(E33):DT(D18) DT(E34):DA(D17) DA(E35):DT(D16) DG(E36):DC(D15) DG(E37):DC(D14) DC(E38):DG(D13) DA(E39):DT(D12) DT(E40):DA(D11) chainA chainB (236) ARG363 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (119) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (120) THR166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence rqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglsaagallqyakctqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldstvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytsptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgavemtetanilhnateyslvlmdeigrgtstydglslawavaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/rqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglsaagallqyakctqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldstvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarpRdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytsptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgafmvemtetanilhnateyslvlmdeigrgtstydglslawavaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/verpasvvkelvensldagatrididierggaklirirdngsgikkdelalalargealasissvsrltltsrtaeqqeawqayavtvkpaahpvgttlevldlfyntparrkflrteKTefnhideiirrialarfdvtinlshngkivrqyravpeggqkerrlgailgtafleqalaiewqhgdltlrgwvadpnhttpalaeiqyfyvngrmmrdrlinhairqayedklgadqqpafvlyleidpsrlvhdfiyqgvlsvlq >7aib_B:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTS-MUTL IN CLAMP STATE organism=? DNA sequence DT(E11):DA(D40) DC(E12):DG(D39) DA(E13):DT(D38) DG(E14):DC(D37) DC(E15):DG(D36) DG(E16):DC(D35) DG(E17):DC(D34) DT(E18):DA(D33) DA(E19):DT(D32) DC(E20):DG(D31) DC(E21):DG(D30) DC(E22):DG(D29) DA(E23):DT(D28) DA(E24):DT(D27) DT(E25):DA(D26) DT(E26):DA(D25) DC(E27):DG(D24) DG(E28):DC(D23) DC(E29):DG(D22) DC(E30):DG(D21) DC(E31):DG(D20) DT(E32):DA(D19) DA(E33):DT(D18) DT(E34):DA(D17) DA(E35):DT(D16) DG(E36):DC(D15) DG(E37):DC(D14) DC(E38):DG(D13) DA(E39):DT(D12) DT(E40):DA(D11) chainB (236) ARG363 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglsaagallqyakctqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldstvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarpRdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytsptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgafmvemtetanilhnateyslvlmdeigrgtstydglslawavaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis >7aic_ABC:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTS-MUTL IN CLAMP STATE (KINKED CLAMP DOMAIN) organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(E11):DA(D40) DC(E12):DG(D39) DA(E13):DT(D38) DG(E14):DC(D37) DC(E15):DG(D36) DG(E16):DC(D35) DG(E17):DC(D34) DT(E18):DA(D33) DA(E19):DT(D32) DC(E20):DG(D31) DC(E21):DG(D30) DC(E22):DG(D29) DA(E23):DT(D28) DA(E24):DT(D27) DT(E25):DA(D26) DT(E26):DA(D25) DC(E27):DG(D24) DG(E28):DC(D23) DC(E29):DG(D22) DC(E30):DG(D21) DC(E31):DG(D20) DT(E32):DA(D19) DA(E33):DT(D18) DT(E34):DA(D17) DA(E35):DT(D16) DG(E36):DC(D15) DG(E37):DC(D14) DC(E38):DG(D13) DA(E39):DT(D12) DT(E40):DA(D11) chainA chainB (234) ARG361 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) ARG363 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG367 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (119) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 (120) THR166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence rqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglsaagallqyakctqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldstvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtarprdlarmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytsptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgavemtetanilhnateyslvlmdeigrgtstydglslawavaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/rqdnllaaiwqdskgfgyatldissgrfrlsepadretmaaelqrtnpaellyaedfaemsliegrrglrrrplwefeidtarqqlnlqfgtrdlvgfgvenaprglsaagallqyakctqrttlphirsitmereqdsiimdaatrrnleitqnlaggaentlasvldstvtpmgsrmlkrwlhmpvrdtrvllerqqtigalqdftaglqpvlrqvgdlerilarlalrtaRpRdlaRmrhafqqlpelraqletvdsapvqalrekmgefaelrdlleraiidtppvlvrdggviasgyneeldewraladgatdylerlevrerertgldtlkvgfnavhgyyiqisrgqshlapinymrrqtlknaeryiipelkeyedkvltskgkalalekqlyeelfdlllphlealqqsasalaeldvlvnlaeraytlnytsptfidkpgiritegrhpvveqvlnepfianplnlspqrrmliitgpnmggkstymrqtalialmayigsyvpaqkveigpidriftrvgafmvemtetanilhnateyslvlmdeigrgtstydglslawavaenlankikaltlfathyfeltqlpekmegvanvhldalehgdtiafmhsvqdgaasksyglavaalagvpkevikrarqklrelesis/verpasvvkelvensldagatrididierggaklirirdngsgikkdelalalargealasissvsrltltsrtaeqqeawqayavtvkpaahpvgttlevldlfyntparrkflrteKTefnhideiirrialarfdvtinlshngkivrqyravpeggqkerrlgailgtafleqalaiewqhgdltlrgwvadpnhttpalaeiqyfyvngrmmrdrlinhairqayedklgadqqpafvlyleisrlvhdfiyqgvlsvlq >7aic_C:ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase;Ribosomal_protein_S5_domain_2-like; title=MUTS-MUTL IN CLAMP STATE (KINKED CLAMP DOMAIN) organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(E11):DA(D40) DC(E12):DG(D39) DA(E13):DT(D38) DG(E14):DC(D37) DC(E15):DG(D36) DG(E16):DC(D35) DG(E17):DC(D34) DT(E18):DA(D33) DA(E19):DT(D32) DC(E20):DG(D31) DC(E21):DG(D30) DC(E22):DG(D29) DA(E23):DT(D28) DA(E24):DT(D27) DT(E25):DA(D26) DT(E26):DA(D25) DC(E27):DG(D24) DG(E28):DC(D23) DC(E29):DG(D22) DC(E30):DG(D21) DC(E31):DG(D20) DT(E32):DA(D19) DA(E33):DT(D18) DT(E34):DA(D17) DA(E35):DT(D16) DG(E36):DC(D15) DG(E37):DC(D14) DC(E38):DG(D13) DA(E39):DT(D12) DT(E40):DA(D11) chainC (119) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 (120) THR166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence verpasvvkelvensldagatrididierggaklirirdngsgikkdelalalargealasissvsrltltsrtaeqqeawqayavtvkpaahpvgttlevldlfyntparrkflrteKTefnhideiirrialarfdvtinlshngkivrqyravpeggqkerrlgailgtafleqalaiewqhgdltlrgwvadpnhttpalaeiqyfyvngrmmrdrlinhairqayedklgadqqpafvlyleisrlvhdfiyqgvlsvlq >7aid_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND D-ASPARTATE TENOFOVIR organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DDG(P822):DC(T706) chainA ( 95) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 (116) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (158) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (184) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 (185) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (357) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 4 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) GLN475 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqymddLyvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7aid_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND D-ASPARTATE TENOFOVIR organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(E706):DDG(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 96) ILE94 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) MET184 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7aif_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND L-GLUTAMATE TENOFOVIR WITH BOUND MANGANESE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(T706):DDG(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 95) ILE94 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) MET184 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 4 0 0 (476) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifQssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmTkilepfkkqnpdiviyqymddLyvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7aif_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND L-GLUTAMATE TENOFOVIR WITH BOUND MANGANESE organism=? DNA sequence DC(E706):DDG(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) chainC ( 96) ILE94 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) MET184 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 3 0 prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >7aif_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND L-GLUTAMATE TENOFOVIR WITH BOUND MANGANESE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(E706):DDG(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) chainC ( 96) ILE94 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) MET184 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 3 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7aig_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND L-GLUTAMATE TENOFOVIR organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(T706):DDG(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 95) ILE94 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqymddLyvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7aig_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND L-GLUTAMATE TENOFOVIR organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(E706):DDG(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 96) ILE94 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7aii_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND L-METHIONINE TENOFOVIR WITH BOUND MANGANESE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(T706):DDG(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 95) ILE94 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) MET184 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 1 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7aii_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND L-METHIONINE TENOFOVIR WITH BOUND MANGANESE organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(E706):DDG(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) chainC ( 96) ILE94 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) MET184 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7aij_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND L-METHIONINE TENOFOVIR organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DDG(P822):DC(T706) chainA ( 95) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 (116) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (158) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (184) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 (185) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 (357) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 1 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >7aij_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND L-METHIONINE TENOFOVIR organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(T706):DDG(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 95) ILE94 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) MET184 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 1 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7aij_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND L-METHIONINE TENOFOVIR organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(E706):DDG(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 96) ILE94 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) MET184 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 chainD prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7amn_A:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF LUXR WITH DNA (REPRESSION) organism=Vibrio alginolyticus DNA sequence DT(E1):DA(F21) DA(E2):DT(F20) DT(E3):DA(F19) DT(E4):DA(F18) DG(E5):DC(F17) DA(E6):DT(F16) DT(E7):DA(F15) DA(E8):DT(F14) DA(E9):DT(F13) DA(E10):DT(F12) DA(E11):DT(F11) DT(E12):DA(F10) DT(E13):DA(F9) DA(E14):DT(F8) DT(E15):DA(F7) DC(E16):DG(F6) DA(E17):DT(F5) DA(E18):DT(F4) DT(E19):DA(F3) DA(E20):DT(F2) DA(E21):DT(F1) chainA ( 2) ARG9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 ( 4) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 11 ( 42) SER49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 43) VAL50 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 44) ALA51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 ( 45) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 47) PHE54 0 0 0 0 0 0 0 0 0 0 0 0 7 9 2 0 0 0 0 0 0 ( 48) ASN55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 prot.sequence pRtRlspikrkqqlmeialevfarrgigrgghadiaeiaqvSVATvFNyfptredlvdevlnhvvrqfsnflsdnidldlharenianitnamielvsqdchwlkvwfewsastrdevwplfvstnrtnqllvqnmfikaiergevcdqhdsehlanlfhgicyslfvqanraaelkhlvnsyldmlci >7amn_AB:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF LUXR WITH DNA (REPRESSION) organism=Vibrio alginolyticus DNA sequence DT(E1):DA(F21) DA(E2):DT(F20) DT(E3):DA(F19) DT(E4):DA(F18) DG(E5):DC(F17) DA(E6):DT(F16) DT(E7):DA(F15) DA(E8):DT(F14) DA(E9):DT(F13) DA(E10):DT(F12) DA(E11):DT(F11) DT(E12):DA(F10) DT(E13):DA(F9) DA(E14):DT(F8) DT(E15):DA(F7) DC(E16):DG(F6) DA(E17):DT(F5) DA(E18):DT(F4) DT(E19):DA(F3) DA(E20):DT(F2) DA(E21):DT(F1) chainB ( 1) ARG9 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG11 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER49 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ALA51 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR52 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) PHE54 0 0 0 0 0 2 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN55 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 2) ARG9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 ( 4) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 11 ( 42) SER49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 43) VAL50 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 44) ALA51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 ( 45) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 47) PHE54 0 0 0 0 0 0 0 0 0 0 0 0 7 9 2 0 0 0 0 0 0 ( 48) ASN55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 prot.sequence pRtRlspikrkqqlmeialevfarrgigrgghadiaeiaqvSVATvFNyfptredlvdevlnhvvrqfsnflsdnidldlharenianitnamielvsqdchwlkvwfewsastrdevwplfvstnrtnqllvqnmfikaiergevcdqhdsehlanlfhgicyslfvqanraaelkhlvnsyldmlci/RtRlspikrkqqlmeialevfarrgigrgghadiaeiaqvSvATvFNyfptredlvdevlnhvvrqfsnflsdnidldlharenianitnamielvsqdchwlkvwfewsastrdevwplfvstnrtnqllvqnmfikaiergevchdsehlanlfhgicyslfvqanraaelkhlvnsyldmlci >7amt_A:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF LUXR WITH DNA (ACTIVATION) organism=Vibrio alginolyticus DNA sequence DA(F1):DT(E21) DT(F2):DA(E20) DA(F3):DT(E19) DA(F4):DT(E18) DT(F5):DA(E17) DG(F6):DC(E16) DA(F7):DT(E15) DC(F8):DG(E14) DA(F9):DT(E13) DT(F10):DA(E12) DT(F11):DA(E11) DA(F12):DT(E10) DC(F13):DG(E9) DT(F14):DA(E8) DG(F15):DC(E7) DT(F16):DA(E6) DA(F17):DT(E5) DT(F18):DA(E4) DA(F19):DT(E3) DT(F20):DA(E2) DA(F21):DT(E1) chainA ( 2) ARG11 5 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER49 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA51 0 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR52 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE54 0 0 0 0 0 0 1 8 7 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRlspikrkqqlmeialevfarrgigrgghadiaeiaqvSvATvFnyfptredlvdevlnhvvrqfsnflsdnidldlharenianitnamielvsqdchwlkvwfewsastrdevwplfvstnrtnqllvqnmfikaiergevcdqhdsehlanlfhgicyslfvqanraaelkhlvnsyldmlc >7amt_AB:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF LUXR WITH DNA (ACTIVATION) organism=Vibrio alginolyticus DNA sequence DT(E1):DA(F21) DA(E2):DT(F20) DT(E3):DA(F19) DA(E4):DT(F18) DT(E5):DA(F17) DA(E6):DT(F16) DC(E7):DG(F15) DA(E8):DT(F14) DG(E9):DC(F13) DT(E10):DA(F12) DA(E11):DT(F11) DA(E12):DT(F10) DT(E13):DA(F9) DG(E14):DC(F8) DT(E15):DA(F7) DC(E16):DG(F6) DA(E17):DT(F5) DT(E18):DA(F4) DT(E19):DA(F3) DA(E20):DT(F2) DT(E21):DA(F1) chainB ( 38) SER49 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA51 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) PHE54 0 0 0 0 0 1 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ASN55 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 5 ( 40) SER49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 42) ALA51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 ( 43) THR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 45) PHE54 0 0 0 0 0 0 0 0 0 0 0 0 7 8 1 0 0 0 0 0 0 prot.sequence tRlspikrkqqlmeialevfarrgigrgghadiaeiaqvSvATvFnyfptredlvdevlnhvvrqfsnflsdnidldlharenianitnamielvsqdchwlkvwfewsastrdevwplfvstnrtnqllvqnmfikaiergevcdqhdsehlanlfhgicyslfvqanraaelkhlvnsyldmlc/lspikrkqqlmeialevfarrgigrgghadiaeiaqvSvAtvFNyfptredlvdevlnhvvrqfsnflsdnidldlharenianitnamielvsqdchwlkvwfewsastrdevwplfvstnrtnqllvqnmfikaiergevchdsehlanlfhgicyslfvqanraaelkhlvnsyldmlci >7amv_BKW:P-loop_containing_nucleoside_triphosphate_hydrolases; title=ATOMIC STRUCTURE OF THE POXVIRUS TRANSCRIPTION PRE-INITIATION COMPLEX IN THE INITIALLY MELTED STATE organism=VACCINIA VIRUS GLV-1H68 DNA sequence DA(N5):DT(T56) DG(N6):DC(T55) DC(N7):DG(T54) DT(N8):DA(T53) DT(N9):DA(T52) DA(N10):DT(T51) DA(N11):DT(T50) DA(N12):DT(T49) DA(N13):DT(T48) DA(N14):DT(T47) DT(N15):DA(T46) DT(N16):DA(T45) DG(N17):DC(T44) DA(N18):DT(T43) DA(N19):DT(T42) DA(N20):DT(T41) DA(N21):DT(T40) DA(N22):DT(T39) DC(N23):DG(T38) DT(N24):DA(T37) DA(N25):DT(T36) DT(N26):DA(T35) DT(N27):DA(T34) DA(N42):DT(T19) DT(N43):DA(T18) DC(N44):DG(T17) DC(N45):DG(T16) DA(N46):DT(T15) DT(N47):DA(T14) DA(N48):DT(T13) DA(N49):DT(T12) DC(N50):DG(T11) DC(N51):DG(T10) DC(N52):DG(T9) DA(N53):DT(T8) DC(N54):DG(T7) DT(N55):DA(T6) DT(N56):DA(T5) DG(N57):DC(T4) DG(N58):DC(T3) DG(N59):DC(T2) DG(N60):DC(T1) chainB (383) LYS390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK (287) SER288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) ALA304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) THR305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ILE308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) SER317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ILE319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) LYS328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) TYR367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) SER369 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG370 0 0 0 0 0 0 0 0 0 0 0 11 7 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLN373 0 0 0 0 0 0 0 0 0 0 10 8 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) LYS378 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) TYR473 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainW (197) LYS197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (271) PHE271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 34 0 0 0 0 0 (273) LYS273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 (391) SER391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (394) LYS394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence emdqrlgykflvpdpkagvfyrplhfqyvsysnfilhrlheiltvkrpllsfknnterimieisnvkvtppdyspiiasikgksydalatftvnifkevmtkegisitkissyegkdshlikiplligygnknpldtakylvpnviggvfinkqsvekvginlvekittwpkfrvvkpnsftfsfssvsppnvlptryrhykisldisqlealnisstktfitvnivllsqylsrvslefirrslsydmppevvylvnaiidsakritesitdfnidtyindlveaehikqksqltinefkyemlhnflphmnytpdqlkgfymisllrkflycifhtsrypdrdsmvchriltygkyfetlahdelenyignirndimnnhKnrgtyavnihvlttpglnhafssllsgkfkksdgsyrthphyswmqnisiprsvgfypsvrkyhpsqylyfcssdvpergpqvglvsqlsvlssitniltseyldlekkiceyirsyykddisyfetgfpitienalvaslnpnmicdfvtdfrrrkrmgffgnlevgitlvrdhmneirinigagrlvrpflvvdngelmmdvcpelesrlddmtfsdiqkefphviemvdieqftfsnvcesvqkfrmmskderkqydlcdfpaefrdgyvasslvginhnsgprailgcaqakqaisclssdirnkidngihlmyperpiviskaletskiaancfgqhvtialmsykginqedgiiikkqfiqrggldivtakkhqveiplenfnnaysklesnglvrlnaflesgdamarnisssfdvsekytdmyksrvervqveltdkvkvrvltmkerrpilgdkfttrtsqkgtvayvadetelpydengitpdviinstsifsrktismlieviltaaysakpynnkgenrpvcfpssnetsidtymqfakqcyehsnpklsdeelsdkifcekilydpetdkpyaskvffgpiyylrlrhltqdkatvrcrgkktklirqanegrkrgggikfgemerdcliahgaantitevlkdseedyqdvyvcencgdiaaqikgintclrcsklnlsplltkidtthvskvfltqmnargvkvkldferrppsfykpldkvdlkpsf/ryivspqlvlqvgkgqeveralyltpydyidekspiyyflrshlniqqpeivkrhilltlrmtqlkgylgnlldikddiiiyshknnleysyvdntifnpfvytqkktllkndsflynvypgacdflviwvaracdtsipefgsyedvdnniikfetmlmevfpqldlditveskfnnifrtnlkltglkkiiqrvqdldinyksllsrydehfinmtgnhfilndeqlnlsiwdldgtlalssdgdtvminnvklftdlvsdidtqmerikgditykvhlatpinSrikldietsfifieTATnNIllssdkkiSiIlaknhisiKvknhipniekyftflviainamfnsvqksadftkvetvYwSRicQntknKnrkpiiinyldpgmkkisnnfyrsdekevfindngimftcmdplgkynkvgflnifhdmrkycipccflhdqshrstfsscvhqidvekkivspYilnfgkvvteskmsflpiifdaflndgmtanmeqdnkrlketsgyhivrccagddivrlrttsdiiqfvnedknilivndmvyfpmnasdigkkihiliqeivhevmivkkkessdkidffppnykllkdlfpkqtiqtpiqsdagmvlttdgfyidgklfnedlsskyvtftknviasdavakyfsplfkyviseakdrfiktwminimihmnvdpnniiptlekyypnsgraqi/mntgiidlfdnhvdsiptilphqlatldylvrtiidenrsvllfhimgsgktiiallfalvasrfkkvyilvpninilkifnynmgvamnlfndefiaenifihsttsfyslnyndnvinynglsrynnsifivdeahnifgnntgelmtviknknkipflllsgspitntpntlghiidlmseetidfgeiisrgKkviqtllnergvnvlkdllkgrisyyempdkdlptiryhgrkfldtrvvychmsklqerdymitrrqlcyhemFdKnmynvsmavlgqlnlmnnldtlfqeqdkelypnlkinngvlygeelvtlnisskfkyfinriqtlngkhfiyfsnstygglvikyimlsngyseyngsqgtnphmingkpktfaivtSkmKssledlldvynspenddgsqlmflfssnimsesytlkevrhiwfmtipdtfsqynqilgrsirkfsyadisepvnvyllaavysdfndevtslndytqdelinvlpfdikkllylkfktketnriysilqemsetyslpphpsivkvllgelvrqffynnsrikyndtkllkmvtsviknkedarnyiddivnghffvsnkvfdksllykyendiitvpfrlsyepfvwgvnfrkeynvvssp >7amv_W:P-loop_containing_nucleoside_triphosphate_hydrolases; title=ATOMIC STRUCTURE OF THE POXVIRUS TRANSCRIPTION PRE-INITIATION COMPLEX IN THE INITIALLY MELTED STATE organism=VACCINIA VIRUS GLV-1H68 DNA sequence DC(T1):DG(N60) DC(T2):DG(N59) DC(T3):DG(N58) DC(T4):DG(N57) DA(T5):DT(N56) DA(T6):DT(N55) DG(T7):DC(N54) DT(T8):DA(N53) DG(T9):DC(N52) DG(T10):DC(N51) DG(T11):DC(N50) DT(T12):DA(N49) DT(T13):DA(N48) DA(T14):DT(N47) DT(T15):DA(N46) DG(T16):DC(N45) DG(T17):DC(N44) DA(T18):DT(N43) DT(T19):DA(N42) DA(T34):DT(N27) DA(T35):DT(N26) DT(T36):DA(N25) DA(T37):DT(N24) DG(T38):DC(N23) DT(T39):DA(N22) DT(T40):DA(N21) DT(T41):DA(N20) DT(T42):DA(N19) DT(T43):DA(N18) DC(T44):DG(N17) DA(T45):DT(N16) DA(T46):DT(N15) DT(T47):DA(N14) DT(T48):DA(N13) DT(T49):DA(N12) DT(T50):DA(N11) DT(T51):DA(N10) DA(T52):DT(N9) DA(T53):DT(N8) DG(T54):DC(N7) DC(T55):DG(N6) DT(T56):DA(N5) chainW (197) LYS197 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (271) PHE271 0 0 0 0 0 34 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (273) LYS273 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) SER391 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) LYS394 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mntgiidlfdnhvdsiptilphqlatldylvrtiidenrsvllfhimgsgktiiallfalvasrfkkvyilvpninilkifnynmgvamnlfndefiaenifihsttsfyslnyndnvinynglsrynnsifivdeahnifgnntgelmtviknknkipflllsgspitntpntlghiidlmseetidfgeiisrgKkviqtllnergvnvlkdllkgrisyyempdkdlptiryhgrkfldtrvvychmsklqerdymitrrqlcyhemFdKnmynvsmavlgqlnlmnnldtlfqeqdkelypnlkinngvlygeelvtlnisskfkyfinriqtlngkhfiyfsnstygglvikyimlsngyseyngsqgtnphmingkpktfaivtSkmKssledlldvynspenddgsqlmflfssnimsesytlkevrhiwfmtipdtfsqynqilgrsirkfsyadisepvnvyllaavysdfndevtslndytqdelinvlpfdikkllylkfktketnriysilqemsetyslpphpsivkvllgelvrqffynnsrikyndtkllkmvtsviknkedarnyiddivnghffvsnkvfdksllykyendiitvpfrlsyepfvwgvnfrkeynvvssp >7aoh_ABY:P-loop_containing_nucleoside_triphosphate_hydrolases; title=ATOMIC STRUCTURE OF THE POXVIRUS LATE INITIALLY TRANSCRIBING COMPLEX organism=VACCINIA VIRUS GLV-1H68 DNA sequence DT(T12):DG(N60) DT(T13):DG(N59) DA(T14):DG(N58) DT(T15):DG(N57) DG(T16):DT(N56) DG(T17):DT(N55) DA(T18):DC(N54) DT(T19):DA(N53) DT(T20):DC(N52) DT(T21):DC(N51) DA(T22):DC(N50) DC(T44):DG(N17) DA(T45):DT(N16) DA(T46):DT(N15) DT(T47):DA(N14) DT(T48):DA(N13) DT(T49):DA(N12) DT(T50):DA(N11) DT(T51):DA(N10) DA(T52):DT(N9) DA(T53):DT(N8) DG(T54):DC(N7) DC(T55):DG(N6) DT(T56):DA(N5) DA(T57):DT(N4) DA(T58):DT(N3) DG(T59):DC(N2) DC(T60):DG(N1) chainA (380) GLN381 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) PRO382 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (748) THR749 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (749) SER750 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainY (150) LYS153 0 0 0 0 0 0 0 0 0 0 0 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLU154 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) PHE286 0 0 0 0 0 0 0 0 0 0 0 10 52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ILE288 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aviskvtyslydqkeinatdiiishvkndddigtvkdgrlgamdgalcktcgktelecfghwgkvsiykthivkpefiseiirllnhicihcgllrsrepysddinlkelsghalrrlkdkilskkkscwnsecmqpyqkitfskkkvcfvnklddinvpnsliyqklisihekfwplleihqypanlfytdyfpippliirpaisfwidsipketneltyllgmivkncnlnadeqviqkavieyddikiisnnttsinlsyitsgknnmirsyivarrkdqtarsvigpstsitvnevgmpayirntltekifvnaftvdkvkqllasnqvkfyfnkrlnqltrirqgkfiknkihllpgdwvevavqeytsiifgrQPslhrynviassirategdtikispgiansqnadfdgdeewmileqnpkavieqsilmypttllkhdihgapvygsiqdeivaayslfriqdlcldevlnilgkygrefdpkgkckfsgkdiytyligekinypgllkdgeiiandvdsnfvvamrhlslagllsdhksnveginfiikssyvfkrylsiygfgvtfkdlrpnstftnkleainvekielikeayakylndvrdgkivplskaleadyvesmlsnltnlnireieehmrqtliddpdnnllkmakagykvnptelmyilgtygqqridgepaetrvlgrvlpyylpdskdpegrgyilnsltkgltgsqyyfsmlvarsqstdivceTSrtgtlarkiikkmedmvvdgygqvvigntlikyaanytkilgsvckpvdliypdesmtwyleisalwnkikqgfvysqkqklakktlapfnflvfvkpttednaikvkdlydmihnviddvrekyfftvsnidfmeyiflthlnpsriritketaitifekfyeklnytlgggtpigiisaqvlsekftqqalssfhtteksgavkqklgfnefnnltnlsknkteiitlvsddisklqsvkinfefvclgelnpnitlrketdkyvvdiivnrlyikraeitelvveymierfisfsvivkewgmetfiedednirftvylnfvepeelnlskfmmvlpgaankgkiskfkipisdytgyddfnqtkklnkmtvelmnlkelgsfdlenvnvypgvwntydifgieaareylceamlntygegfdylyqpcdllasllcasyepesvnkfkfgaastlkratfgdnkallnaalhkksepindnsschffskvpnigtgyykyfidlgllmrm/emdqrlgykflvpdpkagvfyrplhfqyvsysnfilhrlheiltvkrpllsfknnterimieisnvkvtppdyspiiasikgksydalatftvnifkevmtkegisitkissyegkdshlikiplligygnknpldtakylvpnviggvfinkqsvekvginlvekittwpkfrvvkpnsftfsfssvsppnvlptryrhykisldisqlealnisstktfitvnivllsqylsrvslefirrslsydmppevvylvnaiidsakritesitdfnidtyindlveaehikqksqltinefkyemlhnflphmnytpdqlkgfymisllrkflycifhtsrypdrdsmvchriltygkyfetlahdelenyignirndimNNhknrgtyavnihvlttpglnhafssllsgkfkksdgsyrthphyswmqnisiprsvgfypsvrkyhpsqylyfcssdvpergpqvglvsqlsvlssitniltseyldlekkiceyirsyykddisyfetgfpitienalvaslnpnmicdfvtdfrrrkrmgffgnlevgitlvrdhmneirinigagrlvrpflvvdngelmmdvcpelesrlddmtfsdiqkefphviemvdieqftfsnvcesvqkfrmmskderkqydlcdfpaefrdgyvasslvginhnsgprailgcaqakqaisclssdirnkidngihlmyperpiviskaletskiaancfgqhvtialmsykginqedgiiikkqFIqrggldivtakkhqveiplenfnnkerdrsnaysklesnglvrlnaflesgdamarnissisfdvsekytdmyksrvervqveltdkvkvrvltmkerrpilgdkfttrtsqkgtvayvadetelpydengitpdviinstsifsrktismlieviltaaysakpynnkgenrpvcfpssnetsidtymqfakqcyehsnpklsdeelsdkifcekilydpetdkpyaskvffgpiyylrlrhltqdkatvrcrgkktklirqanegrkrgggikfgemerdcliahgaantitevlkdseedyqdvyvcencgdiaaqikgintclrcsklnlsplltkidtthvskvfltqmnargvkvkldferrppsfykpldkvdlkpsf/shaayidyalrrttnmpvemmgsdvvrlkdyqhfvarvflgldsmhslllfhetgvgktmttvyilkhlkdiytnwaiillvkkaliedpwmntilryapeitkdcifinyddqnfrnkfftniktinsksricviidechnfisksliKEdgkirptrsvynflsktialknhkmiclsatpivnsvqeftmlvnllrpgslqhqslfenkrlvdekelvsklgglcsyivnnefsifddvegsasfakktvlmryvnmskkqeeiyqkaklaeiktFrIlrrmattftfndfknslrdrefsksaldtfkkgellkgdasaadislftelkeksvkfidvclgilashgkclvfepfvnqsgieilllyfkvfgisniefssrtkdtrikavaefnqesntngeciktcvfsssggegisffsindifildmtwneaslrqivgrairlnshvltpperryvnvhfimarlsngmptvdedlfeiiqskskefvqlfrvfkhtslewihanekdfspidnesgwktlvsraidlsskknitnkliegtniwysnsnrlmsinrgfkgvdgrvydvdgnylhdmikihdgkliyif >7aoh_Y:P-loop_containing_nucleoside_triphosphate_hydrolases; title=ATOMIC STRUCTURE OF THE POXVIRUS LATE INITIALLY TRANSCRIBING COMPLEX organism=VACCINIA VIRUS GLV-1H68 DNA sequence DG(N1):DC(T60) DC(N2):DG(T59) DT(N3):DA(T58) DT(N4):DA(T57) DA(N5):DT(T56) DG(N6):DC(T55) DC(N7):DG(T54) DT(N8):DA(T53) DT(N9):DA(T52) DA(N10):DT(T51) DA(N11):DT(T50) DA(N12):DT(T49) DA(N13):DT(T48) DA(N14):DT(T47) DT(N15):DA(T46) DT(N16):DA(T45) DG(N17):DC(T44) DC(N50):DA(T22) DC(N51):DT(T21) DC(N52):DT(T20) DA(N53):DT(T19) DC(N54):DA(T18) DT(N55):DG(T17) DT(N56):DG(T16) DG(N57):DT(T15) DG(N58):DA(T14) DG(N59):DT(T13) DG(N60):DT(T12) chainY (150) LYS153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 0 0 0 0 0 0 0 0 0 0 0 (151) GLU154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 (279) PHE286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 104 10 0 0 0 0 0 0 0 0 0 0 0 (281) ILE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence shaayidyalrrttnmpvemmgsdvvrlkdyqhfvarvflgldsmhslllfhetgvgktmttvyilkhlkdiytnwaiillvkkaliedpwmntilryapeitkdcifinyddqnfrnkfftniktinsksricviidechnfisksliKEdgkirptrsvynflsktialknhkmiclsatpivnsvqeftmlvnllrpgslqhqslfenkrlvdekelvsklgglcsyivnnefsifddvegsasfakktvlmryvnmskkqeeiyqkaklaeiktFrIlrrmattftfndfknslrdrefsksaldtfkkgellkgdasaadislftelkeksvkfidvclgilashgkclvfepfvnqsgieilllyfkvfgisniefssrtkdtrikavaefnqesntngeciktcvfsssggegisffsindifildmtwneaslrqivgrairlnshvltpperryvnvhfimarlsngmptvdedlfeiiqskskefvqlfrvfkhtslewihanekdfspidnesgwktlvsraidlsskknitnkliegtniwysnsnrlmsinrgfkgvdgrvydvdgnylhdmikihdgkliyif >7ap9_AB: title=ATOMIC STRUCTURE OF THE POXVIRUS INITIALLY TRANSCRIBING COMPLEX IN CONFORMATION 3 organism=VACCINIA VIRUS GLV-1H68 DNA sequence DT(T20) DT(T21) DA(T22) DT(T23) DA(T24) DG(T25) chainA (208) TRP209 0 0 0 0 0 1 chainB prot.sequence aviskvtyslydqkeinatdiiishvkndddigtvkdgrlgamdgalcktcgktelecfghwgkvsiykthivkpefiseiirllnhicihcgllrsrepysddinlkelsghalrrlkdkilskkkscwnsecmqpyqkitfskkkvcfvnklddinvpnsliyqklisihekfwplleihqypanlfytdyfpippliirpaisfWidsipketneltyllgmivkncnlnadeqviqkavieyddikiisnnttsinlsyitsgknnmirsyivarrkdqtarsvigpstsitvnevgmpayirntltekifvnaftvdkvkqllasnqvkfyfnkrlnqltrirqgkfiknkihllpgdwvevavqeytsiifgrqpslhrynviassirategdtikispgiansqnadfdgdeewmileqnpkavieqsilmypttllkhdihgapvygsiqdeivaayslfriqdlcldevlnilgkygrefdpkgkckfsgkdiytyligekinypgllkdgeiiandvdsnfvvamrhlslagllsdhksnveginfiikssyvfkrylsiygfgvtfkdlrpnstftnkleainvekielikeayakylndvrdgkivplskaleadyvesmlsnltnlnireieehmrqtliddpdnnllkmakagykvnptelmyilgtygqqridgepaetrvlgrvlpyylpdskdpegrgyilnsltkgltgsqyyfsmlvarsqstdivcetsrtgtlarkiikkmedmvvdgygqvvigntlikyaanytkilgsvckpvdliypdesmtwyleisalwnkikqgfvysqkqklakktlapfnflvfvkpttednaikvkdlydmihnviddvrekyfftvsnidfmeyiflthlnpsriritketaitifekfyeklnytlgggtpigiisaqvlsekftqqalssfhtteksgavkqklgfnefnnltnlsknkteiitlvsddisklqsvkinfefvclgelnpnitlrketdkyvvdiivnrlyikraeitelvveymierfisfsvivkewgmetfiedednirftvylnfvepeelnlskfmmvlpgaankgkiskfkipisdytgyddfnqtkklnkmtvelmnlkelgsfdlenvnvypgvwntydifgieaareylceamlntygegfdylyqpcdllasllcasyepesvnkfkfgaastlkratfgdnkallnaalhkksepindnsschffskvpnigtgyykyfidlgllmrmerkls/emdqrlgykflvpdpkagvfyrplhfqyvsysnfilhrlheiltvkrpllsfknnterimieisnvkvtppdyspiiasikgksydalatftvnifkevmtkegisitkissyegkdshlikiplligygnknpldtakylvpnviggvfinkqsvekvginlvekittwpkfrvvkpnsftfsfssvsppnvlptryrhykisldiSqlealnisstktfitvnivllsqylsrvslefirrslsydmppevvylvnaiidsakritesitdfnidtyindlveaehikqksqltinefkyemlhnflphmnytpdqlkgfymisllrkflycifhtsrypdrdsmvchriltygkyfetlahdelenyignirndimnnhknrgtyavnihvlttpglnhafssllsgkfkksdgsyrthphyswmqnisiprsvgfypvrkyhpsqylyfcssdvpergpqvglvsqlsvlssitniltseyldlekkiceyirsyykddisyfetgfpitienalvaslnpnmicdfvtdfrrrkrmgffgnlevgitlvrdhmneirinigagrlvrpflvvdngelmmdvcpelesrlddmtfsdiqkefphviemvdieqftfsnvcesvqkfrmmskderkqydlcdfpaefrdgyvasslvginhnsgprailgcaqakqaisclssdirnkidngihlmyperpiviskaletskiaancfgqhvtialmsykginqedgiiikkqfiqrggldivtakkhqveiplenfnnkerdrsnaysklesnglvrlnaflesgdamarnissvsekytdmyksrvervqveltdkvkvrvltmkerrpilgdkfttrtsqkgtvayvadetelpydengitpdviinstsifsrktismlieviltaaysakpynnkgenrpvcfpssnetsidtymqfakqcyehsnpklsdeelsdkifcekilydpetdkpyaskvffgpiyylrlrhltqdkatvrcrgkktklirqanegrkrgggikfgemerdcliahgaantitevlkdseedyqdvyvcencgdiaaqikgintclrcsklnlsplltkidtthvskvfltqmnargvkvkldferrppsfykpldkvdlkpsf >7apd_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=BOVINE PAPILLOMAVIRUS E1 DNA HELICASE-REPLICATION FORK COMPLEX organism=BOVINE PAPILLOMAVIRUS DNA sequence DT(P1) DG(P2) DT(P3) DA(P4) DT(P5) DT(P6) DT(P7) DC(P8) DA(P9) DC(P10) DA(P11) DC(P12) DC(P13) DG(P14) DC(P15) DA(P16) DC(P17) DC(P18) DT(P19) DC(P20) DA(P21) DG(P22) DC(P23) DG(P24) DC(P25) DG(P26) DT(P27) DT(P28) DT(P29) DT(P30) DT(P31) DT(P32) DT(P33) DT(P34) DT(P35) DT(P36) DT(P37) DT(P38) DT(P39) DT(P40) chainA ( 49) LYS356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LYS359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) HIS507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 prot.sequence tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqaKhvKdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldlideeedseedgdsm >7apd_ABF:Origin_of_replication-binding_domain,_RBD-like;P-loop_containing_nucleoside_triphosphate_hydrolases; title=BOVINE PAPILLOMAVIRUS E1 DNA HELICASE-REPLICATION FORK COMPLEX organism=BOVINE PAPILLOMAVIRUS DNA sequence DT(P1) DG(P2) DT(P3) DA(P4) DT(P5) DT(P6) DT(P7) DC(P8) DA(P9) DC(P10) DA(P11) DC(P12) DC(P13) DG(P14) DC(P15) DA(P16) DC(P17) DC(P18) DT(P19) DC(P20) DA(P21) DG(P22) DC(P23) DG(P24) DC(P25) DG(P26) DT(P27) DT(P28) DT(P29) DT(P30) DT(P31) DT(P32) DT(P33) DT(P34) DT(P35) DT(P36) DT(P37) DT(P38) DT(P39) DT(P40) chainB (155) SER462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainF ( 49) LYS356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) SER462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (200) HIS507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 chainA ( 49) LYS356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LYS359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) HIS507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 prot.sequence tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqaKhvKdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldlideeedseedgdsm/tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkShfwlasladtraalvddathacwryfdtylrnaldgypvsidrkhkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldlideeedseedgdsmrtftc/tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqaKhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkShfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldlideeedseedgdsmrt >7at8_D:Histone-fold; title=HISTONE H3 RECOGNITION BY NUCLEOSOME-BOUND PRC2 SUBUNIT EZH2. organism=? DNA sequence DA(U-77):DT(T77) DT(U-76):DA(T76) DA(U-75):DT(T75) DC(U-74):DG(T74) DA(U-73):DT(T73) DG(U-72):DC(T72) DG(U-71):DC(T71) DA(U-70):DT(T70) DT(U-69):DA(T69) DG(U-68):DC(T68) DT(U-67):DA(T67) DA(U-66):DT(T66) DT(U-65):DA(T65) DA(U-64):DT(T64) DT(U-63):DA(T63) DA(U-62):DT(T62) DT(U-61):DA(T61) DA(U-60):DT(T60) DT(U-59):DA(T59) DC(U-58):DG(T58) DT(U-57):DA(T57) DG(U-56):DC(T56) DA(U-55):DT(T55) DC(U-54):DG(T54) DA(U-53):DT(T53) DC(U-52):DG(T52) DG(U-51):DC(T51) DT(U-50):DA(T50) DG(U-49):DC(T49) DC(U-48):DG(T48) DC(U-47):DG(T47) DT(U-46):DA(T46) DG(U-45):DC(T45) DG(U-44):DC(T44) DA(U-43):DT(T43) DG(U-42):DC(T42) DA(U-41):DT(T41) DC(U-40):DG(T40) DT(U-39):DA(T39) DA(U-38):DT(T38) DG(U-37):DC(T37) DG(U-36):DC(T36) DG(U-35):DC(T35) DA(U-34):DT(T34) DG(U-33):DC(T33) DT(U-32):DA(T32) DA(U-31):DT(T31) DA(U-30):DT(T30) DT(U-29):DA(T29) DC(U-28):DG(T28) DC(U-27):DG(T27) DC(U-26):DG(T26) DC(U-25):DG(T25) DT(U-24):DA(T24) DT(U-23):DA(T23) DG(U-22):DC(T22) DG(U-21):DC(T21) DC(U-20):DG(T20) DG(U-19):DC(T19) DG(U-18):DC(T18) DT(U-17):DA(T17) DT(U-16):DA(T16) DA(U-15):DT(T15) DA(U-14):DT(T14) DA(U-13):DT(T13) DA(U-12):DT(T12) DC(U-11):DG(T11) DG(U-10):DC(T10) DC(U-9):DG(T9) DG(U-8):DC(T8) DG(U-7):DC(T7) DG(U-6):DC(T6) DG(U-5):DC(T5) DG(U-4):DC(T4) DA(U-3):DT(T3) DC(U-2):DG(T2) DA(U-1):DT(T1) DG(U0):DC(T0) DC(U1):DG(T-1) DG(U2):DC(T-2) DC(U3):DG(T-3) DG(U4):DC(T-4) DT(U5):DA(T-5) DA(U6):DT(T-6) DC(U7):DG(T-7) DG(U8):DC(T-8) DT(U9):DA(T-9) DG(U10):DC(T-10) DC(U11):DG(T-11) DG(U12):DC(T-12) DT(U13):DA(T-13) DT(U14):DA(T-14) DT(U15):DA(T-15) DA(U16):DT(T-16) DA(U17):DT(T-17) DG(U18):DC(T-18) DC(U19):DG(T-19) DG(U20):DC(T-20) DG(U21):DC(T-21) DT(U22):DA(T-22) DG(U23):DC(T-23) DC(U24):DG(T-24) DT(U25):DA(T-25) DA(U26):DT(T-26) DG(U27):DC(T-27) DA(U28):DT(T-28) DG(U29):DC(T-29) DC(U30):DG(T-30) DT(U31):DA(T-31) DG(U32):DC(T-32) DT(U33):DA(T-33) DC(U34):DG(T-34) DT(U35):DA(T-35) DA(U36):DT(T-36) DC(U37):DG(T-37) DG(U38):DC(T-38) DA(U39):DT(T-39) DC(U40):DG(T-40) DC(U41):DG(T-41) DA(U42):DT(T-42) DA(U43):DT(T-43) DT(U44):DA(T-44) DT(U45):DA(T-45) DG(U46):DC(T-46) DA(U47):DT(T-47) DG(U48):DC(T-48) DC(U49):DG(T-49) DG(U50):DC(T-50) DG(U51):DC(T-51) DC(U52):DG(T-52) DC(U53):DG(T-53) DT(U54):DA(T-54) DC(U55):DG(T-55) DG(U56):DC(T-56) DG(U57):DC(T-57) DC(U58):DG(T-58) DA(U59):DT(T-59) DC(U60):DG(T-60) DC(U61):DG(T-61) DG(U62):DC(T-62) DG(U63):DC(T-63) DG(U64):DC(T-64) DA(U65):DT(T-65) DT(U66):DA(T-66) DT(U67):DA(T-67) DC(U68):DG(T-68) DT(U69):DA(T-69) DC(U70):DG(T-70) DC(U71):DG(T-71) DA(U72):DT(T-72) DG(U73):DC(T-73) DT(U74):DA(T-74) DA(U75):DT(T-75) DT(U76):DA(T-76) DG(U77):DC(T-77) DA(U78):DT(T-78) chainD ( 19) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tkaarksapatggvkkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >7aud_E:P-loop_containing_nucleoside_triphosphate_hydrolases;HRDC-like; title=STRUCTURE OF AN ENGINEERED HELICASE DOMAIN CONSTRUCT FOR HUMAN BLOOM SYNDROME PROTEIN (BLM) organism=HOMO SAPIENS DNA sequence DG(Q2):DC(M5) DT(Q3):DA(M4) DA(Q4):DT(M3) DC(Q5):DG(M2) chainE (359) HIS996 0 0 4 1 (362) THR999 0 0 0 3 (366) ARG1003 0 0 0 28 prot.sequence nlkherfqslsfphtkemmkifhkkfglhnfrtnqleainaallgedcfilmptgggkslcyqlpacvspgvtvvisplrslivdqvqkltsldipatyltgdktdseatniylqlskkdpiikllyvtpekicasnrlistlenlyerkllarfvideahcvsqwghdfrqdykrmnmlrqkfpsvpvmaltatanprvqkdiltqlkilrpqvfsmsfnrhnlkyyvlpkkpkkvafdclewirkhhpydsgiiyclsrrecdtmadtlqrdglaalayhaglsdsardevqqkwinqdgcqvicatiafgmgidkpdvrfvihaslpksvegyyqesgragrdgeishcllfytyHdvTrlkRlimmekdgnhhtrethfnnlysmvhycenitecrriqllayfgengfnpdfckkhpdvscdnccsqreemvkkclgeltevckslgkvfgvhyfnifntvtlkklaeslssdpevllqidgvtedklekygaevisvlqkysewtsp >7aw7_ABCDE:Histone-fold;Leucine_zipper_domain; title=CCAAT-BINDING COMPLEX AND HAPX BOUND TO ASPERGILLUS NIDULANS CCCA DNA organism=ASPERGILLUS NIDULANS FGSC A4 DNA sequence DC(G3):DG(F37) DC(G4):DG(F36) DG(G5):DC(F35) DA(G6):DT(F34) DG(G7):DC(F33) DC(G8):DG(F32) DC(G9):DG(F31) DA(G10):DT(F30) DA(G11):DT(F29) DT(G12):DA(F28) DC(G13):DG(F27) DA(G14):DT(F26) DG(G15):DC(F25) DA(G16):DT(F24) DG(G17):DC(F23) DC(G18):DG(F22) DG(G19):DC(F21) DA(G20):DT(F20) DA(G21):DT(F19) DG(G22):DC(F18) DT(G23):DA(F17) DG(G24):DC(F16) DA(G25):DT(F15) DT(G26):DA(F14) DT(G27):DA(F13) DA(G28):DT(F12) DC(G29):DG(F11) DC(G30):DG(F10) DA(G31):DT(F9) DA(G32):DT(F8) DC(G33):DG(F7) DC(G34):DG(F6) DC(G35):DG(F5) DG(G36):DC(F4) DC(G37):DG(F3) chainA ( 41) ARG273 0 0 0 0 0 0 0 0 2 9 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) HIS276 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG280 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG282 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ARG287 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE288 0 0 0 0 0 0 21 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 11) ALA51 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 14) PRO51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 4 4 0 0 0 0 0 0 0 0 ( 30) GLN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 35) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 4 0 0 0 0 0 ( 38) PHE75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 ( 39) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 chainE ( 4) ARG64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 ( 9) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 12) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 6 0 0 0 0 0 0 0 0 0 ( 15) PHE75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 ( 16) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 prot.sequence plyvnakqfhrilkrrvarqkleeqlrltskgrkpylhesRhnHamrRpRgpggRFlt/mkeqdrwlpiAnvarimklalpenakiakeakecmqecvsefisfitseasekcqqekrktvngedilfamtslgfenyaealkiylskyre/twanvnqglqGtardilttywqhvinhlesdnhdykihqlplarikkvmkadpevkmisaeapilfakgcdvfiteltmrawihaednkrrtlqrsdiaaalsksdmfdflidivpr/vtskewiipprpkPgRkpatdtpptkrkaQnraaQraFRerraarvseledqikkieddheihvatfkeqianlsreveqcrtemgwwrdrsh/ptkRkaqNRaaQraFRerraarvseledqikkieddheihvatfkeqianlsreveqcrtemgwwrdr >7aw7_D:Leucine_zipper_domain; title=CCAAT-BINDING COMPLEX AND HAPX BOUND TO ASPERGILLUS NIDULANS CCCA DNA organism=? DNA sequence DG(F3):DC(G37) DC(F4):DG(G36) DG(F5):DC(G35) DG(F6):DC(G34) DG(F7):DC(G33) DT(F8):DA(G32) DT(F9):DA(G31) DG(F10):DC(G30) DG(F11):DC(G29) DT(F12):DA(G28) DA(F13):DT(G27) DA(F14):DT(G26) DT(F15):DA(G25) DC(F16):DG(G24) DA(F17):DT(G23) DC(F18):DG(G22) DT(F19):DA(G21) DT(F20):DA(G20) DC(F21):DG(G19) DG(F22):DC(G18) DC(F23):DG(G17) DT(F24):DA(G16) DC(F25):DG(G15) DT(F26):DA(G14) DG(F27):DC(G13) DA(F28):DT(G12) DT(F29):DA(G11) DT(F30):DA(G10) DG(F31):DC(G9) DG(F32):DC(G8) DC(F33):DG(G7) DT(F34):DA(G6) DC(F35):DG(G5) DG(F36):DC(G4) DG(F37):DC(G3) chainD ( 14) PRO51 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG53 0 0 0 0 0 0 0 0 4 4 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) GLN67 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN72 0 0 0 0 0 4 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PHE75 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG76 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vtskewiipprpkPgRkpatdtpptkrkaQnraaQraFRerraarvseledqikkieddheihvatfkeqianlsreveqcrtemgwwrdrsh >7aw9_ABCDE:Histone-fold;Leucine_zipper_domain; title=CCAAT-BINDING COMPLEX AND HAPX BOUND TO ASPERGILLUS FUMIGATUS CCCA DNA organism=ASPERGILLUS NIDULANS FGSC A4 DNA sequence DA(G3):DT(F37) DT(G4):DA(F36) DC(G5):DG(F35) DC(G6):DG(F34) DA(G7):DT(F33) DC(G8):DG(F32) DC(G9):DG(F31) DA(G10):DT(F30) DA(G11):DT(F29) DT(G12):DA(F28) DC(G13):DG(F27) DA(G14):DT(F26) DA(G15):DT(F25) DC(G16):DG(F24) DG(G17):DC(F23) DC(G18):DG(F22) DC(G19):DG(F21) DT(G20):DA(F20) DC(G21):DG(F19) DC(G22):DG(F18) DG(G23):DC(F17) DT(G24):DA(F16) DG(G25):DC(F15) DA(G26):DT(F14) DT(G27):DA(F13) DT(G28):DA(F12) DG(G29):DC(F11) DT(G30):DA(F10) DC(G31):DG(F9) DA(G32):DT(F8) DG(G33):DC(F7) DC(G34):DG(F6) DA(G35):DT(F5) DA(G36):DT(F4) DT(G37):DA(F3) chainA ( 40) ARG273 0 0 0 0 0 0 0 0 1 6 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) HIS276 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ALA277 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG280 0 0 0 0 0 0 0 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG282 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG287 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) PHE288 0 0 0 0 0 0 18 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 11) ALA51 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 14) PRO51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 15 6 1 0 0 0 0 0 0 0 0 ( 35) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 7 0 0 0 0 0 ( 38) PHE75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 39) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 chainE ( 3) ARG64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 9 0 0 0 0 0 0 0 0 ( 14) PHE75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 15) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence lyvnakqfhrilkrrvarqkleeqlrltskgrkpylhesRhnHAmrRpRgpggRFl/mkeqdrwlpiAnvarimklalpenakiakeakecmqecvsefisfitseasekcqqekrktvngedilfamtslgfenyaealkiylskyre/gtwanvnqglQgtardilttywqhvinhlesdnhdykihqlplarikkvmkadpevkmisaeapilfakgcdvfiteltmrawihaednkrrtlqrsdiaaalsksdmfdflidivpr/vtskewiipprpkPgRkpatdtpptkrkaqnraaQraFRerraarvseledqikkieddheihvatfkeqianlsreveqcrtemgwwrdrsh/tkRkaqnraaQraFRerraarvseledqikkieddheihvatfkeqianlsreveqcrtemgwwr >7b0c_A:"Winged_helix"_DNA-binding_domain; title=[4FE-4S]-NSRR COMPLEXED TO 23-BP HMPA1 OPERATOR FRAGMENT organism=Streptomyces coelicolor A3(2) / Streptomyces coelicolor A3(2) DNA sequence DA(C1):DT(D23) DA(C2):DT(D22) DC(C3):DG(D21) DA(C4):DT(D20) DC(C5):DG(D19) DG(C6):DC(D18) DA(C7):DT(D17) DA(C8):DT(D16) DT(C9):DA(D15) DA(C10):DT(D14) DT(C11):DA(D13) DC(C12):DG(D12) DA(C13):DT(D11) DT(C14):DA(D10) DC(C15):DG(D9) DT(C16):DA(D8) DA(C17):DT(D7) DC(C18):DG(D6) DC(C19):DG(D5) DA(C20):DT(D4) DA(C21):DT(D3) DT(C22):DA(D2) DT(C23):DA(D1) chainA ( 41) THR41 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) HIS42 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) LYS45 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG60 1 8 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrltkftdlalrslmrlavvrdgdeplatrevaevvgvpyTHaaKaitrlqhlgvvearRgrgggltltdlgrrvsvgwlvrelegeaevvdcegdnpcplrgacrlrralrdaqeafyaaldpltvtdlvaaptgpvllgltd >7b0c_AB:"Winged_helix"_DNA-binding_domain; title=[4FE-4S]-NSRR COMPLEXED TO 23-BP HMPA1 OPERATOR FRAGMENT organism=Streptomyces coelicolor A3(2) / Streptomyces coelicolor A3(2) / Streptomyces coelicolor A3(2) / Streptomyces coelicolor A3(2) DNA sequence DA(D1):DT(C23) DA(D2):DT(C22) DT(D3):DA(C21) DT(D4):DA(C20) DG(D5):DC(C19) DG(D6):DC(C18) DT(D7):DA(C17) DA(D8):DT(C16) DG(D9):DC(C15) DA(D10):DT(C14) DT(D11):DA(C13) DG(D12):DC(C12) DA(D13):DT(C11) DT(D14):DA(C10) DA(D15):DT(C9) DT(D16):DA(C8) DT(D17):DA(C7) DC(D18):DG(C6) DG(D19):DC(C5) DT(D20):DA(C4) DG(D21):DC(C3) DT(D22):DA(C2) DT(D23):DA(C1) chainA ( 41) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 ( 42) HIS42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 45) LYS45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 ( 60) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 8 1 chainB ( 40) TYR40 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR41 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) HIS42 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) LYS45 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG60 3 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrltkftdlalrslmrlavvrdgdeplatrevaevvgvpyTHaaKaitrlqhlgvvearRgrgggltltdlgrrvsvgwlvrelegeaevvdcegdnpcplrgacrlrralrdaqeafyaaldpltvtdlvaaptgpvllgltd/mrltkftdlalrslmrlavvrdgdeplatrevaevvgvpYTHaaKaitrlqhlgvvearRgrgggltltdlgrrvsvgwlvrelegeaevvdcegdnpcplrgacrlrralrdaqeafyaaldpltvtdlvaaptgpvllgltd >7b0f_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TGOT_6G12 BINARY COMPLEX organism=Thermococcus gorgonarius DNA sequence DC(B7):DG(C10) DG(B8):DC(C9) DC(B9):DG(C8) DA(B10):DT(C7) DT(B11):DA(C6) DT(B12):DA(C5) chainA (494) TYR494 0 0 0 0 0 1 (541) THR541 0 0 0 0 0 1 (592) LYS592 0 0 0 4 6 0 prot.sequence mildtdyitedgkpvirifkkengefkidydrnfepyiyallkddsaiedvkkitaerhgttvrvvraekvkkkflgrpievwklyfthpqdqpairdkikehpavvdiyeydipfakrylidkglipmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknidlpyvdvvstekemikrflkvvkekdpdvlityngdnfdfaylkkrseklgvkfilgregsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeaifgqpkekvyaeeiaqawetgeglervarysmedakvtyelgkeffpmeaqlsrlvgqslwdvsrsstgnlvewfllrkayernelapnkpderelarrresyaggyvkeperglwenivyldfrslypsiiithnvspdtlnregceeydvapqvghkfckdfpgfipsllgdlleerqkvkkkmkatidpiekklldyrqrlikilansfYgyygyakarwyckecaesvtawgrqyiettireieekfgfkvlyadTdgffatipgadaetvkkkakefldyinaklpglleleyegfykrgffatkKkyavideedkittrglkmrdwseiaketqarvleailkhgdveeavrivkevteklskyevppeqlviyqtvisyivpkaipfdefdpakhkydagyyienqvlpaverilrafgyrkedlryqktrqv >7b0g_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TGOT_6G12 BINARY WITH 2 HCTPS organism=Thermococcus gorgonarius DNA sequence DG(T4):6HC(P13) DC(T5):DG(P12) DT(T6):DA(P11) DG(T7):DC(P10) DC(T8):DG(P9) DC(T9):DG(P8) DC(T10):DG(P7) DT(T11):DA(P6) DC(T12):DG(P5) DC(T13):DG(P4) chainA (349) THR349 7 0 0 0 0 0 0 0 0 0 (409) TYR409 3 0 0 0 0 0 0 0 0 0 (494) TYR494 3 2 0 0 0 0 0 0 0 0 (592) LYS592 0 0 8 7 0 0 0 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkidydrnfepyiyallkddsaiedvkkitaerhgttvrvvraekvkkkflgrpievwklyfthpqdqpairdkikehpavvdiyeydipfakrylidkglipmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknidlpyvdvvstekemikrflkvvkekdpdvlityngdnfdfaylkkrseklgvkfilgregsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeaifgqpkekvyaeeiaqawetgeglervarysmedakvtyelgkeffpmeaqlsrlvgqslwdvsrssTgnlvewfllrkayernelapnkpderelarrresyaggyvkeperglwenivyldfrslypsiiithnvspdtlnregceeydvapqvghkfckdfpgfipsllgdlleerqkvkkkmkatidpiekklldyrqrlikilansfYgyygyakarwyckecaesvtawgrqyiettireieekfgfkvlyadtdgffatipgadaetvkkkakefldyinaklpglleleyegfykrgffatkKkyavideedkittrglkmvrrdwseiaketqarvleailkhgdveeavrivkevteklskyevppeqlviyqpipgtvisyivpkggdraipfdefdpakhkydagyyienqvlpaverilrafgyrkedlryqktrqvglgawl >7b0h_E:DNA/RNA_polymerases;Ribonuclease_H-like; title=TGOT_6G12 TERNARY COMPLEX organism=Thermococcus gorgonarius DNA sequence DA(A4):TTP(E804) DA(A5):DT(G12) DA(A6):DT(G11) DT(A7):DA(G10) DG(A8):DC(G9) DC(A9):DG(G8) DG(A10):DC(G7) chainE (349) THR349 4 0 0 0 0 0 0 (404) ASP404 6 0 0 0 0 0 0 (406) ARG406 2 0 0 0 0 0 0 (407) SER407 4 0 0 0 0 0 0 (408) LEU408 1 0 0 0 0 0 0 (410) PRO410 1 0 0 0 0 0 0 (460) ARG460 9 0 0 0 0 0 0 (487) LYS487 15 0 0 0 0 0 0 (488) ILE488 3 0 0 0 0 0 0 (491) ASN491 19 0 0 0 0 0 0 (492) SER492 15 0 0 0 0 0 0 (494) TYR494 2 2 0 0 0 0 0 (542) ASP542 6 0 0 0 0 0 0 (578) GLU578 1 0 0 0 0 0 0 (580) GLU580 1 0 0 0 0 0 0 (592) LYS592 0 0 4 5 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkidydrnfepyiyallkddsaiedvkkitaerhgttvrvvraekvkkkflgrpievwklyfthpqdqpairdkikehpavvdiyeydipfakrylidkglipmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknidlpyvdvvstekemikrflkvvkekdpdvlityngdnfdfaylkkrseklgvkfilgregsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeaifgqpkekvyaeeiaqawetgeglervarysmedakvtyelgkeffpmeaqlsrlvgqslwdvsrssTgnlvewfllrkayernelapnkpderelarrresyaggyvkeperglwenivyldfrslypsiiithnvspdtlnregceeydvapqvghkfckdfpgfipsllgdlleerqkvkkkmkatidpiekklldyrqrlikIlanSfYgyygyakarwyckecaesvtawgrqyiettireieekfgfkvlyadtdgffatipgadaetvkkkakefldyinaklpglleleyegfykrgffatkKkyavideedkittrglkmvrrdwseiaketqarvleailkhgdveeavrivkevteklskyevppeqlviyirpgtvisyivpdefdpakhkydagyyienqvlpaverilrafgyrkedl >7b0y_ABE: title=STRUCTURE OF A TRANSCRIBING RNA POLYMERASE II-U1 SNRNP COMPLEX organism=SUS SCROFA DOMESTICUS DNA sequence DA(N9):DT(T40) DG(N10):DC(T39) DC(N11):DG(T38) DG(N12):DC(T37) DG(N13):DC(T36) DC(N14):DG(T35) DC(N15):DT(T34) DC(N16):DC(T33) DT(N17):DT(T32) DT(N18):DT(T31) DG(N19):DG(T30) DT(N20):DG(T29) DG(N21):DG(T28) DT(N22):DT(T27) DT(N23):DG(T26) DC(N24):DA(T25) DA(N25):DG(T24) DG(N26):DC(T23) DG(N27):DC(T22) DA(N28):DT(T21) DG(N29):DC(T20) DC(N30):DG(T19) DC(N31):DG(T18) DA(N32):DT(T17) DG(N33):DC(T16) DC(N34):DG(T15) DA(N35):DT(T14) DG(N36):DC(T13) DG(N37):DC(T12) DG(N38):DC(T11) DA(N39):DT(T10) DG(N40):DC(T9) DC(N41):DG(T8) DT(N42):DA(T7) DG(N43):DC(T6) DG(N44):DC(T5) DG(N45):DC(T4) chainA (230) MET266 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) ASN272 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) ARG327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) MET329 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) LYS331 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (818) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (819) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1357) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1358) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (197) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) ARG230 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) PRO231 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) SER233 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) THR234 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) TYR262 0 0 0 0 0 0 0 0 0 2 0 1 41 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) LYS264 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) LYS327 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) TYR338 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) LYS409 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) ASN410 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) ASP455 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (425) LYS457 0 0 0 0 0 0 26 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) LYS458 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (428) HIS460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) GLN461 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (460) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (462) LYS494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpRaMqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlnaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekck/deitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqappryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecRsclenssRPtSTiwvsmlargaigqrivatlpYiKqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgaKpgvtkekrikYakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfKNllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgDqKKaHQaragvsqvlnrltfastlshlrrlnspigrDgKlakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlprytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsEtagryitYRlVQ >7b0y_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURE OF A TRANSCRIBING RNA POLYMERASE II-U1 SNRNP COMPLEX organism=SUS SCROFA DOMESTICUS DNA sequence DA(N9):DT(T40) DG(N10):DC(T39) DC(N11):DG(T38) DG(N12):DC(T37) DG(N13):DC(T36) DC(N14):DG(T35) DC(N15):DT(T34) DC(N16):DC(T33) DT(N17):DT(T32) DT(N18):DT(T31) DG(N19):DG(T30) DT(N20):DG(T29) DG(N21):DG(T28) DT(N22):DT(T27) DT(N23):DG(T26) DC(N24):DA(T25) DA(N25):DG(T24) DG(N26):DC(T23) DG(N27):DC(T22) DA(N28):DT(T21) DG(N29):DC(T20) DC(N30):DG(T19) DC(N31):DG(T18) DA(N32):DT(T17) DG(N33):DC(T16) DC(N34):DG(T15) DA(N35):DT(T14) DG(N36):DC(T13) DG(N37):DC(T12) DG(N38):DC(T11) DA(N39):DT(T10) DG(N40):DC(T9) DC(N41):DG(T8) DT(N42):DA(T7) DG(N43):DC(T6) DG(N44):DC(T5) DG(N45):DC(T4) chainB (197) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) ARG230 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) PRO231 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) SER233 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) THR234 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) TYR262 0 0 0 0 0 0 0 0 0 2 0 1 41 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) LYS264 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) LYS327 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) TYR338 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) LYS409 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) ASN410 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) ASP455 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (425) LYS457 0 0 0 0 0 0 26 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) LYS458 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (428) HIS460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) GLN461 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (460) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (462) LYS494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence deitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqappryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecRsclenssRPtSTiwvsmlargaigqrivatlpYiKqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgaKpgvtkekrikYakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfKNllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgDqKKaHQaragvsqvlnrltfastlshlrrlnspigrDgKlakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlprytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv >7b1y_ABCD:Iron-dependent_repressor_protein,_dimerization_domain;C-terminal_domain_of_transcriptional_repressors;"Winged_helix"_DNA-binding_domain; title=DTXR-LIKE IRON-DEPENDENT REGULATOR IDER COMPLEXED WITH COBALT AND ITS CONSENSUS DNA-BINDING SEQUENCE organism=? DNA sequence DG(E1):DC(F29) DT(E2):DA(F28) DG(E3):DC(F27) DA(E4):DT(F26) DC(E5):DG(F25) DT(E6):DA(F24) DT(E7):DA(F23) DA(E8):DT(F22) DG(E9):DC(F21) DG(E10):DC(F20) DT(E11):DA(F19) DT(E12):DA(F18) DA(E13):DT(F17) DG(E14):DC(F16) DC(E15):DG(F15) DC(E16):DG(F14) DT(E17):DA(F13) DA(E18):DT(F12) DA(E19):DT(F11) DC(E20):DG(F10) DC(E21):DG(F9) DT(E22):DA(F8) DA(E23):DT(F7) DA(E24):DT(F6) DG(E25):DC(F5) DT(E26):DA(F4) DA(E27):DT(F3) DC(E28):DG(F2) DG(E29):DC(F1) chainA ( 35) SER37 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 5 3 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 36) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 3 3 0 0 0 0 0 0 0 0 0 0 ( 39) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 42) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 36) SER37 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PRO39 0 0 0 0 0 0 0 0 0 0 2 3 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER42 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG60 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 4 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence dlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhlearwehvmseaverklvkllgnpttspygnpipgldelgv/ndlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhlearwehvmseaverklvkllgnpttspygnpipgldelgvpvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrvk/ndlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedRhleltkagraraisvmrkhrlaerllvdvigleweqvhlearwehvmseaverklvkllgnpttspygnpipgldelgvpvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrvk/dlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhlearwehvmseaverklvkllgnpttspygnpipgldelgv >7b1y_D:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain; title=DTXR-LIKE IRON-DEPENDENT REGULATOR IDER COMPLEXED WITH COBALT AND ITS CONSENSUS DNA-BINDING SEQUENCE organism=? DNA sequence DG(E1):DC(F29) DT(E2):DA(F28) DG(E3):DC(F27) DA(E4):DT(F26) DC(E5):DG(F25) DT(E6):DA(F24) DT(E7):DA(F23) DA(E8):DT(F22) DG(E9):DC(F21) DG(E10):DC(F20) DT(E11):DA(F19) DT(E12):DA(F18) DA(E13):DT(F17) DG(E14):DC(F16) DC(E15):DG(F15) DC(E16):DG(F14) DT(E17):DA(F13) DA(E18):DT(F12) DA(E19):DT(F11) DC(E20):DG(F10) DC(E21):DG(F9) DT(E22):DA(F8) DA(E23):DT(F7) DA(E24):DT(F6) DG(E25):DC(F5) DT(E26):DA(F4) DA(E27):DT(F3) DC(E28):DG(F2) DG(E29):DC(F1) chainD ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 4 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 prot.sequence dlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhlearwehvmseaverklvkllgnpttspygnpipgldelgv >7b20_ABCD:Iron-dependent_repressor_protein,_dimerization_domain;C-terminal_domain_of_transcriptional_repressors;"Winged_helix"_DNA-binding_domain; title=DTXR-LIKE IRON-DEPENDENT REGULATOR IDER COMPLEXED WITH IRON AND ITS CONSENSUS DNA-BINDING SEQUENCE organism=? DNA sequence DC(F1):DG(E29) DG(F2):DC(E28) DT(F3):DA(E27) DA(F4):DT(E26) DC(F5):DG(E25) DT(F6):DA(E24) DT(F7):DA(E23) DA(F8):DT(E22) DG(F9):DC(E21) DG(F10):DC(E20) DT(F11):DA(E19) DT(F12):DA(E18) DA(F13):DT(E17) DG(F14):DC(E16) DG(F15):DC(E15) DC(F16):DG(E14) DT(F17):DA(E13) DA(F18):DT(E12) DA(F19):DT(E11) DC(F20):DG(E10) DC(F21):DG(E9) DT(F22):DA(E8) DA(F23):DT(E7) DA(F24):DT(E6) DG(F25):DC(E5) DT(F26):DA(E4) DC(F27):DG(E3) DA(F28):DT(E2) DC(F29):DG(E1) chainA ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 3 3 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 chainB ( 36) SER37 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PRO39 0 0 0 0 0 0 0 0 0 0 3 3 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER42 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 36) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 3 0 0 0 0 0 0 0 0 0 0 ( 39) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 42) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 35) SER37 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 3 3 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgv/ndlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgvsvepvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrvk/ndlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgvsvepvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrvk/dlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgv >7b20_D:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain; title=DTXR-LIKE IRON-DEPENDENT REGULATOR IDER COMPLEXED WITH IRON AND ITS CONSENSUS DNA-BINDING SEQUENCE organism=? DNA sequence DG(E1):DC(F29) DT(E2):DA(F28) DG(E3):DC(F27) DA(E4):DT(F26) DC(E5):DG(F25) DT(E6):DA(F24) DT(E7):DA(F23) DA(E8):DT(F22) DG(E9):DC(F21) DG(E10):DC(F20) DT(E11):DA(F19) DT(E12):DA(F18) DA(E13):DT(F17) DG(E14):DC(F16) DC(E15):DG(F15) DC(E16):DG(F14) DT(E17):DA(F13) DA(E18):DT(F12) DA(E19):DT(F11) DC(E20):DG(F10) DC(E21):DG(F9) DT(E22):DA(F8) DA(E23):DT(F7) DA(E24):DT(F6) DG(E25):DC(F5) DT(E26):DA(F4) DA(E27):DT(F3) DC(E28):DG(F2) DG(E29):DC(F1) chainD ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 3 3 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence dlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgv >7b23_ABCD:Iron-dependent_repressor_protein,_dimerization_domain;C-terminal_domain_of_transcriptional_repressors;"Winged_helix"_DNA-binding_domain; title=DTXR-LIKE IRON-DEPENDENT REGULATOR IDER COMPLEXED WITH COBALT AND THE SACE_2689 PROMOTER DNA-BINDING SEQUENCE organism=? DNA sequence DC(F2):DG(E30) DG(F3):DC(E29) DT(F4):DA(E28) DA(F5):DT(E27) DC(F6):DG(E26) DT(F7):DA(E25) DT(F8):DA(E24) DT(F9):DA(E23) DG(F10):DC(E22) DG(F11):DC(E21) DT(F12):DA(E20) DA(F13):DT(E19) DA(F14):DT(E18) DA(F15):DT(E17) DG(F16):DC(E16) DC(F17):DG(E15) DT(F18):DA(E14) DA(F19):DT(E13) DA(F20):DT(E12) DC(F21):DG(E11) DC(F22):DG(E10) DT(F23):DA(E9) DA(F24):DT(E8) DA(F25):DT(E7) DG(F26):DC(E6) DT(F27):DA(E5) DC(F28):DG(E4) DA(F29):DT(E3) DC(F30):DG(E2) chainA ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 3 5 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 chainB ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 2 3 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 2 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 35) SER37 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 5 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhlearwehvmseaverklvkllgnpttspygnpipgldelgv/dlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhlearwehvmseaverklvkllgnpttspygnpipgldelgvpvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrv/dlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhlearwehvmseaverklvkllgnpttspygnpipgldelgvpvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrv/dlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhlearwehvmseaverklvkllgnpttspygnpipgldelgv >7b23_D:Iron-dependent_repressor_protein,_dimerization_domain;"Winged_helix"_DNA-binding_domain; title=DTXR-LIKE IRON-DEPENDENT REGULATOR IDER COMPLEXED WITH COBALT AND THE SACE_2689 PROMOTER DNA-BINDING SEQUENCE organism=? DNA sequence DC(F2):DG(E30) DG(F3):DC(E29) DT(F4):DA(E28) DA(F5):DT(E27) DC(F6):DG(E26) DT(F7):DA(E25) DT(F8):DA(E24) DT(F9):DA(E23) DG(F10):DC(E22) DG(F11):DC(E21) DT(F12):DA(E20) DA(F13):DT(E19) DA(F14):DT(E18) DA(F15):DT(E17) DG(F16):DC(E16) DC(F17):DG(E15) DT(F18):DA(E14) DA(F19):DT(E13) DA(F20):DT(E12) DC(F21):DG(E11) DC(F22):DG(E10) DT(F23):DA(E9) DA(F24):DT(E8) DA(F25):DT(E7) DG(F26):DC(E6) DT(F27):DA(E5) DC(F28):DG(E4) DA(F29):DT(E3) DC(F30):DG(E2) chainD ( 35) SER37 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 5 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLN43 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dlidttemylrtiydleeegvvplrariaerleqSgPTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhlearwehvmseaverklvkllgnpttspygnpipgldelgv >7b24_ABCD:Iron-dependent_repressor_protein,_dimerization_domain;C-terminal_domain_of_transcriptional_repressors;"Winged_helix"_DNA-binding_domain; title=DTXR-LIKE IRON-DEPENDENT REGULATOR IDER (P39G VARIANT) COMPLEXED WITH COBALT AND ITS CONSENSUS DNA-BINDING SEQUENCE organism=? DNA sequence DC(F1):DG(E30) DG(F2):DC(E29) DT(F3):DA(E28) DA(F4):DT(E27) DC(F5):DG(E26) DT(F6):DA(E25) DT(F7):DA(E24) DA(F8):DT(E23) DG(F9):DC(E22) DG(F10):DC(E21) DT(F11):DA(E20) DT(F12):DA(E19) DA(F13):DT(E18) DG(F14):DC(E17) DG(F15):DC(E16) DC(F16):DG(E15) DT(F17):DA(E14) DA(F18):DT(E13) DA(F19):DT(E12) DC(F20):DG(E11) DC(F21):DG(E10) DT(F22):DA(E9) DA(F23):DT(E8) DA(F24):DT(E7) DG(F25):DC(E6) DT(F26):DA(E5) DC(F27):DG(E4) DA(F28):DT(E3) DC(F29):DG(E2) chainA ( 36) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 39) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 ( 41) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 42) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 ( 46) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainB ( 36) SER37 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 36) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 36) SER37 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR40 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER42 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN43 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG47 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ndlidttemylrtiydleeegvvplrariaerleqSggTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgvgds/ndlidttemylrtiydleeegvvplrariaerleqSggTvsQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgvepvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrvk/ndlidttemylrtiydleeegvvplrariaerleqSggTvsQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgpvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrvk/ndlidttemylrtiydleeegvvplrariaerleqSggTvSQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgvgds >7b24_C:Iron-dependent_repressor_protein,_dimerization_domain;C-terminal_domain_of_transcriptional_repressors;"Winged_helix"_DNA-binding_domain; title=DTXR-LIKE IRON-DEPENDENT REGULATOR IDER (P39G VARIANT) COMPLEXED WITH COBALT AND ITS CONSENSUS DNA-BINDING SEQUENCE organism=? DNA sequence DG(E2):DC(F29) DT(E3):DA(F28) DG(E4):DC(F27) DA(E5):DT(F26) DC(E6):DG(F25) DT(E7):DA(F24) DT(E8):DA(F23) DA(E9):DT(F22) DG(E10):DC(F21) DG(E11):DC(F20) DT(E12):DA(F19) DT(E13):DA(F18) DA(E14):DT(F17) DG(E15):DC(F16) DC(E16):DG(F15) DC(E17):DG(F14) DT(E18):DA(F13) DA(E19):DT(F12) DA(E20):DT(F11) DC(E21):DG(F10) DC(E22):DG(F9) DT(E23):DA(F8) DA(E24):DT(F7) DA(E25):DT(F6) DG(E26):DC(F5) DT(E27):DA(F4) DA(E28):DT(F3) DC(E29):DG(F2) DG(E30):DC(F1) chainC ( 36) SER37 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ndlidttemylrtiydleeegvvplrariaerleqSggTvsQtvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgpvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrvk >7b25_ABCD:Iron-dependent_repressor_protein,_dimerization_domain;C-terminal_domain_of_transcriptional_repressors;"Winged_helix"_DNA-binding_domain; title=DTXR-LIKE IRON-DEPENDENT REGULATOR IDER (Q43A VARIANT) COMPLEXED WITH COBALT AND ITS CONSENSUS DNA-BINDING SEQUENCE organism=? DNA sequence DC(F1):DG(E29) DG(F2):DC(E28) DT(F3):DA(E27) DA(F4):DT(E26) DC(F5):DG(E25) DT(F6):DA(E24) DT(F7):DA(E23) DA(F8):DT(E22) DG(F9):DC(E21) DG(F10):DC(E20) DT(F11):DA(E19) DT(F12):DA(E18) DA(F13):DT(E17) DG(F14):DC(E16) DG(F15):DC(E15) DC(F16):DG(E14) DT(F17):DA(E13) DA(F18):DT(E12) DA(F19):DT(E11) DC(F20):DG(E10) DC(F21):DG(E9) DT(F22):DA(E8) DA(F23):DT(E7) DA(F24):DT(E6) DG(F25):DC(E5) DT(F26):DA(E4) DA(F27):DT(E3) DC(F28):DG(E2) DG(F29):DC(E1) chainA ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 3 3 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 chainB ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 3 3 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG60 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 3 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 35) SER37 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 3 4 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dlidttemylrtiydleeegvvplrariaerleqSgPTvSatvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgv/dlidttemylrtiydleeegvvplrariaerleqSgPTvSatvaRmerdglltvaedRhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgvsvepvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrvk/dlidttemylrtiydleeegvvplrariaerleqSgPTvSatvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgvsvepvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrvk/dlidttemylrtiydleeegvvplrariaerleqSgPTvSatvaRmerdglltvaedrhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgv >7b25_B:Iron-dependent_repressor_protein,_dimerization_domain;C-terminal_domain_of_transcriptional_repressors;"Winged_helix"_DNA-binding_domain; title=DTXR-LIKE IRON-DEPENDENT REGULATOR IDER (Q43A VARIANT) COMPLEXED WITH COBALT AND ITS CONSENSUS DNA-BINDING SEQUENCE organism=? DNA sequence DC(F1):DG(E29) DG(F2):DC(E28) DT(F3):DA(E27) DA(F4):DT(E26) DC(F5):DG(E25) DT(F6):DA(E24) DT(F7):DA(E23) DA(F8):DT(E22) DG(F9):DC(E21) DG(F10):DC(E20) DT(F11):DA(E19) DT(F12):DA(E18) DA(F13):DT(E17) DG(F14):DC(E16) DG(F15):DC(E15) DC(F16):DG(E14) DT(F17):DA(E13) DA(F18):DT(E12) DA(F19):DT(E11) DC(F20):DG(E10) DC(F21):DG(E9) DT(F22):DA(E8) DA(F23):DT(E7) DA(F24):DT(E6) DG(F25):DC(E5) DT(F26):DA(E4) DA(F27):DT(E3) DC(F28):DG(E2) DG(F29):DC(E1) chainB ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO39 0 0 0 0 0 0 0 0 0 0 3 3 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG60 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dlidttemylrtiydleeegvvplrariaerleqSgPTvSatvaRmerdglltvaedRhleltkagraraisvmrkhrlaerllvdvigleweqvhleacrwehvmseaverklvkllgnpttspygnpipgldelgvsvepvdtdlrrvdevarsgggralvcriaehvqldpdlmselkkvgvvpgneidivavagvnkpiqvqgseggtqlqpgiahavmvrvk >7b46_B:p53-like_transcription_factors; title=STRUCTURAL BASIS OF REACTIVATION OF ONCOGENIC P53 MUTANTS BY A SMALL MOLECULE: METHYLENE QUINUCLIDINONE (MQ). HUMAN WILD-TYPE P53DBD BOUND TO DNA AND MQ: WT-DNA-MQ (P1) organism=Homo sapiens DNA sequence DC(E1):DG(F12) DG(E2):DC(F11) DG(E3):DC(F10) DG(E4):DC(F9) DC(E5):DG(F8) DA(E6):DT(F7) DT(E7):DA(F6) DG(E8):DC(F5) DC(E9):DG(F4) DC(E10):DG(F3) DC(E11):DG(F2) chainB ( 23) LYS120 0 0 0 0 0 0 0 0 7 10 2 (178) ALA276 0 0 0 0 0 0 0 1 1 0 0 (179) CYS277 0 0 0 0 0 0 0 0 3 0 0 (182) ARG280 0 0 0 0 0 0 11 11 5 0 0 prot.sequence svpsqktyqgsygfrlgflhtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenl >7b49_A:p53-like_transcription_factors; title=STRUCTURAL BASIS OF REACTIVATION OF ONCOGENIC P53 MUTANTS BY A SMALL MOLECULE: METHYLENE QUINUCLIDINONE (MQ). HUMAN P53DBD-R273H MUTANT BOUND TO DNA AND MQ: R273H-DNA-MQ organism=Homo sapiens DNA sequence DG(C2) DG(C3) DG(C4) DC(C5) DA(C6) DT(C7) DG(C8) DC(C9) DC(C10) DC(C11) DG(C12) DG(C13) DG(C14) DC(C15) DA(C16) DT(C17) DG(C18) DC(C19) DC(C20) DC(C21) chainA ( 24) LYS120 4 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG248 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) ARG280 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhaKsvctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevhvcacpgRdrrteeenlrkkg >7b49_AB: title=STRUCTURAL BASIS OF REACTIVATION OF ONCOGENIC P53 MUTANTS BY A SMALL MOLECULE: METHYLENE QUINUCLIDINONE (MQ). HUMAN P53DBD-R273H MUTANT BOUND TO DNA AND MQ: R273H-DNA-MQ organism=Homo sapiens DNA sequence DG(C2) DG(C3) DG(C4) DC(C5) DA(C6) DT(C7) DG(C8) DC(C9) DC(C10) DC(C11) DG(C12) DG(C13) DG(C14) DC(C15) DA(C16) DT(C17) DG(C18) DC(C19) DC(C20) DC(C21) chainA ( 24) LYS120 4 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG248 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) ARG280 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 24) LYS120 0 0 0 0 0 0 0 0 0 0 4 8 5 0 0 0 0 0 0 0 (150) ARG248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (182) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhaKsvctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevhvcacpgRdrrteeenlrkkg/sssvpsqktyqgsygfrlgflhaKsvctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevhvcacpgRdrrteeenlrkkg >7b4a_AB: title=STRUCTURAL BASIS OF REACTIVATION OF ONCOGENIC P53 MUTANTS BY A SMALL MOLECULE: METHYLENE QUINUCLIDINONE (MQ). HUMAN P53DBD-R273H MUTANT BOUND TO DNA: R273H-DNA organism=Homo sapiens DNA sequence DG(C1) DG(C2) DG(C3) DC(C4) DA(C5) DT(C6) DG(C7) DC(C8) DC(C9) DC(C10) DG(C11) DG(C12) DG(C13) DC(C14) DA(C15) DT(C16) DG(C17) DC(C18) DC(C19) DC(C20) chainA ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (178) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (179) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (182) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 3 0 0 chainB ( 27) LYS120 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (178) ALA276 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (179) CYS277 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) ARG280 0 0 0 0 0 13 11 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphherclappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevhvcACpgRdrrteeenlrkkg/sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphherclappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevhvcACpgRdrrteeenlrkkg >7b4a_B:p53-like_transcription_factors; title=STRUCTURAL BASIS OF REACTIVATION OF ONCOGENIC P53 MUTANTS BY A SMALL MOLECULE: METHYLENE QUINUCLIDINONE (MQ). HUMAN P53DBD-R273H MUTANT BOUND TO DNA: R273H-DNA organism=Homo sapiens DNA sequence DG(C1) DG(C2) DG(C3) DC(C4) DA(C5) DT(C6) DG(C7) DC(C8) DC(C9) DC(C10) DG(C11) DG(C12) DG(C13) DC(C14) DA(C15) DT(C16) DG(C17) DC(C18) DC(C19) DC(C20) chainB ( 27) LYS120 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (178) ALA276 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (179) CYS277 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (182) ARG280 0 0 0 0 0 13 11 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphherclappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevhvcACpgRdrrteeenlrkkg >7b4d_A:p53-like_transcription_factors; title=STRUCTURAL BASIS OF REACTIVATION OF ONCOGENIC P53 MUTANTS BY A SMALL MOLECULE: METHYLENE QUINUCLIDINONE (MQ). HUMAN P53DBD-R273C/S240R DOUBLE MUTANT BOUND TO DNA AND MQ: R273C/S240R-DNA-MQ organism=Homo sapiens DNA sequence DC(C1) DG(C2) DG(C3) DG(C4) DC(C5) DA(C6) DT(C7) DG(C8) DC(C9) DC(C10) DC(C11) DG(C12) chainA ( 27) LYS120 0 0 0 0 0 0 0 0 2 0 0 0 (180) ALA276 0 0 0 0 0 0 0 1 1 0 0 0 (181) CYS277 0 0 0 0 0 0 0 0 3 0 0 0 (184) ARG280 0 0 0 0 0 0 12 11 3 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnrscmggmnrrpiltiitledssgnllgrnsfevcvcACpgRdrrteeenlrkkg >7b4e_A:p53-like_transcription_factors; title=STRUCTURAL BASIS OF REACTIVATION OF ONCOGENIC P53 MUTANTS BY A SMALL MOLECULE: METHYLENE QUINUCLIDINONE (MQ). HUMAN P53DBD-R282W MUTANT BOUND TO DNA AND MQ: R282W-DNA-MQ organism=Homo sapiens DNA sequence DC(B1) DG(B2) DG(B3) DG(B4) DC(B5) DA(B6) DT(B7) DG(B8) DC(B9) DC(B10) DC(B11) chainA (177) ARG280 0 0 0 1 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgfvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdwrteeenlrkkg >7b4f_A:p53-like_transcription_factors; title=STRUCTURAL BASIS OF REACTIVATION OF ONCOGENIC P53 MUTANTS BY A SMALL MOLECULE: METHYLENE QUINUCLIDINONE (MQ). HUMAN P53DBD-R282W MUTANT BOUND TO DNA: R282W-MQ (I) organism=Homo sapiens DNA sequence DC(B1) DG(B2) DG(B3) DG(B4) DC(B5) DA(B6) DT(B7) DG(B8) DC(B9) DC(B10) DC(B11) chainA ( 27) LYS120 0 4 8 5 0 0 0 0 0 0 0 (183) ARG280 0 0 0 3 1 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdwrteeenlrkkg >7b4g_A:p53-like_transcription_factors; title=STRUCTURAL BASIS OF REACTIVATION OF ONCOGENIC P53 MUTANTS BY A SMALL MOLECULE: METHYLENE QUINUCLIDINONE (MQ). HUMAN P53DBD-R282W MUTANT BOUND TO DNA: R282W-MQ (II) organism=Homo sapiens DNA sequence DC(B1) DG(B2) DG(B3) DG(B4) DC(B5) DA(B6) DT(B7) DG(B8) DC(B9) DC(B10) DC(B11) DG(B12) chainA ( 27) LYS120 0 5 8 5 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 3 1 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdwrteeenlrkkg >7b4h_A:p53-like_transcription_factors; title=STRUCTURAL BASIS OF REACTIVATION OF ONCOGENIC P53 MUTANTS BY A SMALL MOLECULE: METHYLENE QUINUCLIDINONE (MQ). HUMAN WILD-TYPE P53DBD BOUND TO DNA AND MQ: WT-DNA-MQ (III) organism=Homo sapiens DNA sequence DC(B1) DG(B2) DG(B3) DG(B4) DC(B5) DA(B6) DT(B7) DG(B8) DC(B9) DC(B10) DC(B11) DG(B12) chainA ( 24) LYS120 0 0 6 5 0 0 0 0 0 0 0 0 (181) ARG280 0 0 0 2 1 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkkg >7b4n_A:p53-like_transcription_factors; title=STRUCTURAL BASIS OF REACTIVATION OF ONCOGENIC P53 MUTANTS BY A SMALL MOLECULE: METHYLENE QUINUCLIDINONE (MQ). HUMAN WILD-TYPE P53DBD BOUND TO DNA AND MQ: WT-DNA-MQ (II) organism=Homo sapiens DNA sequence DC(B1) DG(B2) DG(B3) DG(B4) DC(B5) DA(B6) DT(B7) DG(B8) DC(B9) DC(B10) DC(B11) DG(B12) chainA ( 25) LYS120 0 1 8 5 0 0 0 0 0 0 0 0 (179) ARG280 0 0 0 3 1 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsaKvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphherclappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcacpgRdrrteeenlrkkg >7b5y_ABCD:TrkA_C-terminal_domain-like;"Winged_helix"_DNA-binding_domain; title=S. AGALACTIAE BUSR IN COMPLEX WITH ITS BUSAB-PROMOTOR DNA organism=STREPTOCOCCUS AGALACTIAE DNA sequence DC(F1):DG(E46) DC(F2):DG(E45) DG(F3):DC(E44) DA(F4):DT(E43) DA(F5):DT(E42) DA(F6):DT(E41) DA(F7):DT(E40) DG(F8):DC(E39) DT(F9):DA(E38) DG(F10):DC(E37) DA(F11):DT(E36) DC(F12):DG(E35) DT(F13):DA(E34) DA(F14):DT(E33) DC(F15):DG(E32) DC(F16):DG(E31) DC(F17):DG(E30) DT(F18):DA(E29) DT(F19):DA(E28) DT(F20):DA(E27) DT(F21):DA(E26) DA(F22):DT(E25) DC(F23):DG(E24) DG(F24):DC(E23) DA(F25):DT(E22) DT(F26):DA(E21) DA(F27):DT(E20) DC(F28):DG(E19) DT(F29):DA(E18) DT(F30):DA(E17) DT(F31):DA(E16) DA(F32):DT(E15) DA(F33):DT(E14) DC(F34):DG(E13) DG(F35):DC(E12) DT(F36):DA(E11) DC(F37):DG(E10) DA(F38):DT(E9) DC(F39):DG(E8) DT(F40):DA(E7) DT(F41):DA(E6) DT(F42):DA(E5) DA(F43):DT(E4) DC(F44):DG(E3) DC(F45):DG(E2) DG(F46):DC(E1) chainC ( 41) SER48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 7) TYR13 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLU50 0 0 0 0 0 0 0 0 0 0 0 1 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG53 0 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) HIS69 0 0 0 0 0 0 0 1 3 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 7) TYR13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 18 4 0 0 0 0 0 0 0 0 0 ( 42) SER48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLU50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 18 9 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 ( 48) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) HIS69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 chainD ( 31) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eivtskYqkiavavaqriangdyevgeklksrttiastfnvspEtaRkglniladlqiltlkHgsgaiilskekaieflnqyetshsvailkgkirdnikaqqqemeelatlvddfllqtravskqyplapyeiivsedsehlgksigelnvwhqtgativaiehegkfivspgpfsvieqgdhiffvgdedvyarmktyfnlrmg/eivtskYqkiavavaqriangdyevgeklksRttiastfnvSpETaRKglniladlqiltlkHgsgaiilskekaieflnqyetshsvailkgkirdnikaqqqemeelatlvddfllqtravskqyplapyeiivsedsehlgksigelnvwhqtgativaiehegkfivspgpfsvieqgdhiffvgdedvyarmktyfnlr/ivtskyqkiavavaqriangdyevgeklksrttiastfnvSpetarkglniladlqiltlkhgsgaiilskekaieflnqyetshsvailkgkirdnikaqqqemeelatlvddfllqtravskqyplapyeiivsedsehlgksigelnvwhqtgativaiehegkfivspgpfsvieqgdhiffvgdedvyarmktyfnlr/vtskyqkiavavaqriangdyevgeklksrTtiaStfnvSpetarkglniladlqiltlkhgsgaiilskekaieflnqyetshsvailkgkirdnikaqqqemeelatlvddfllqtravskqyplapyeiivsedsehlgksigelnvwhqtgativaiehegkfivspgpfsvieqgdhiffvgdedvyarmktyfnlrmgl >7b5y_B:TrkA_C-terminal_domain-like;"Winged_helix"_DNA-binding_domain; title=S. AGALACTIAE BUSR IN COMPLEX WITH ITS BUSAB-PROMOTOR DNA organism=? DNA sequence DC(F1):DG(E46) DC(F2):DG(E45) DG(F3):DC(E44) DA(F4):DT(E43) DA(F5):DT(E42) DA(F6):DT(E41) DA(F7):DT(E40) DG(F8):DC(E39) DT(F9):DA(E38) DG(F10):DC(E37) DA(F11):DT(E36) DC(F12):DG(E35) DT(F13):DA(E34) DA(F14):DT(E33) DC(F15):DG(E32) DC(F16):DG(E31) DC(F17):DG(E30) DT(F18):DA(E29) DT(F19):DA(E28) DT(F20):DA(E27) DT(F21):DA(E26) DA(F22):DT(E25) DC(F23):DG(E24) DG(F24):DC(E23) DA(F25):DT(E22) DT(F26):DA(E21) DA(F27):DT(E20) DC(F28):DG(E19) DT(F29):DA(E18) DT(F30):DA(E17) DT(F31):DA(E16) DA(F32):DT(E15) DA(F33):DT(E14) DC(F34):DG(E13) DG(F35):DC(E12) DT(F36):DA(E11) DC(F37):DG(E10) DA(F38):DT(E9) DC(F39):DG(E8) DT(F40):DA(E7) DT(F41):DA(E6) DT(F42):DA(E5) DA(F43):DT(E4) DC(F44):DG(E3) DC(F45):DG(E2) DG(F46):DC(E1) chainB ( 7) TYR13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 18 4 0 0 0 0 0 0 0 0 0 ( 42) SER48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLU50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 18 9 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 ( 48) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) HIS69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence eivtskYqkiavavaqriangdyevgeklksRttiastfnvSpETaRKglniladlqiltlkHgsgaiilskekaieflnqyetshsvailkgkirdnikaqqqemeelatlvddfllqtravskqyplapyeiivsedsehlgksigelnvwhqtgativaiehegkfivspgpfsvieqgdhiffvgdedvyarmktyfnlr >7bca_AB:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF THE HTH DNA BINDING PROTEIN ARDK FROM R388 PLASMID BOUND TO A DIRECT-REPEAT DNA ELEMENT organism=Escherichia coli K-12 DNA sequence DG(D1):DC(C19) DT(D2):DA(C18) DA(D3):DT(C17) DT(D4):DA(C16) DT(D5):DA(C15) DG(D6):DC(C14) DA(D7):DT(C13) DC(D8):DG(C12) DA(D9):DT(C11) DC(D10):DG(C10) DC(D11):DG(C9) DT(D12):DA(C8) DA(D13):DT(C7) DT(D14):DA(C6) DT(D15):DA(C5) DG(D16):DC(C4) DA(D17):DT(C3) DC(D18):DG(C2) chainA ( 37) SER44 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG45 0 0 0 0 0 0 8 17 10 0 0 0 0 0 0 0 0 0 ( 39) GLN46 0 0 0 0 20 9 6 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG47 0 4 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER49 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 chainB ( 39) SER44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 40) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 ( 41) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 16 12 0 ( 42) ARG47 0 0 0 0 0 0 0 0 0 0 0 8 8 3 0 0 0 0 ( 44) SER49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence dlrprlgrlteetidiarevlvegksqsdvarerglSRQRvSsmvksvvsaaneiprewqrvevwlppnlaekvrqmeadakadvarknqltdaal/fddlrprlgrlteetidiarevlvegksqsdvarerglSRQRvSsmvksvvsaaneiprewqrvevwlppnlaekvrqmeadakadvarknql >7bca_B:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF THE HTH DNA BINDING PROTEIN ARDK FROM R388 PLASMID BOUND TO A DIRECT-REPEAT DNA ELEMENT organism=Escherichia coli K-12 DNA sequence DG(D1):DC(C19) DT(D2):DA(C18) DA(D3):DT(C17) DT(D4):DA(C16) DT(D5):DA(C15) DG(D6):DC(C14) DA(D7):DT(C13) DC(D8):DG(C12) DA(D9):DT(C11) DC(D10):DG(C10) DC(D11):DG(C9) DT(D12):DA(C8) DA(D13):DT(C7) DT(D14):DA(C6) DT(D15):DA(C5) DG(D16):DC(C4) DA(D17):DT(C3) DC(D18):DG(C2) chainB ( 39) SER44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 40) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 ( 41) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 16 12 0 ( 42) ARG47 0 0 0 0 0 0 0 0 0 0 0 8 8 3 0 0 0 0 ( 44) SER49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence fddlrprlgrlteetidiarevlvegksqsdvarerglSRQRvSsmvksvvsaaneiprewqrvevwlppnlaekvrqmeadakadvarknql >7bcb_A:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF THE HTH DNA BINDING PROTEIN ARDK FROM R388 PLASMID BOUND TO IR3 DNA organism=Escherichia coli K-12 DNA sequence DT(C1):DA(D18) DA(C2):DT(D17) DA(C3):DT(D16) DT(C4):DA(D15) DG(C5):DC(D14) DT(C6):DA(D13) DC(C7):DG(D12) DA(C8):DT(D11) DA(C9):DT(D10) DA(C10):DT(D9) DT(C11):DA(D8) DA(C12):DT(D7) DT(C13):DA(D6) DT(C14):DA(D5) DG(C15):DC(D4) DA(C16):DT(D3) DC(C17):DG(D2) DA(C18):DT(D1) chainA ( 35) SER44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 36) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 4 17 8 0 0 ( 37) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 21 prot.sequence rprlgrlteetidiarevlvegksqsdvarerglSRQrvssmvksvvsaaneiprewqrvevwlppnlaekvrqmeadakadvarknqltdaal >7bcb_AB:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF THE HTH DNA BINDING PROTEIN ARDK FROM R388 PLASMID BOUND TO IR3 DNA organism=Escherichia coli K-12 DNA sequence DT(C1):DA(D18) DA(C2):DT(D17) DA(C3):DT(D16) DT(C4):DA(D15) DG(C5):DC(D14) DT(C6):DA(D13) DC(C7):DG(D12) DA(C8):DT(D11) DA(C9):DT(D10) DA(C10):DT(D9) DT(C11):DA(D8) DA(C12):DT(D7) DT(C13):DA(D6) DT(C14):DA(D5) DG(C15):DC(D4) DA(C16):DT(D3) DC(C17):DG(D2) DA(C18):DT(D1) chainA ( 35) SER44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 36) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 4 17 8 0 0 ( 37) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 21 chainB ( 43) SER44 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 ( 44) ARG45 0 0 0 11 16 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) GLN46 0 0 0 0 0 9 12 19 0 0 0 0 0 0 0 0 0 0 ( 46) ARG47 0 0 0 0 0 0 0 0 3 8 2 0 0 0 0 0 0 0 ( 48) SER49 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rprlgrlteetidiarevlvegksqsdvarerglSRQrvssmvksvvsaaneiprewqrvevwlppnlaekvrqmeadakadvarknqltdaal/taaafddlrprlgrlteetidiarevlvegksqsdvarerglSRQRvSsmvksvvsaaneiprewqrvevwlppnlaekvrqmeadakadvarknql >7bef_ACDFG:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=STRUCTURES OF CLASS II BACTERIAL TRANSCRIPTION COMPLEXES organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / KLEBSIELLA PNEUMONIAE / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(N-57):DA(T57) DC(N-56):DG(T56) DA(N-55):DT(T55) DG(N-54):DC(T54) DG(N-53):DC(T53) DT(N-52):DA(T52) DA(N-51):DT(T51) DT(N-50):DA(T50) DA(N-49):DT(T49) DG(N-48):DC(T48) DC(N-47):DG(T47) DA(N-46):DT(T46) DC(N-45):DG(T45) DT(N-44):DA(T44) DG(N-43):DC(T43) DA(N-42):DT(T42) DA(N-41):DT(T41) DT(N-40):DA(T40) DG(N-39):DC(T39) DA(N-38):DT(T38) DC(N-37):DG(T37) DA(N-36):DT(T36) DA(N-35):DT(T35) DA(N-34):DT(T34) DA(N-33):DT(T33) DC(N-32):DG(T32) DA(N-31):DT(T31) DA(N-30):DT(T30) DA(N-29):DT(T29) DA(N-28):DT(T28) DT(N-27):DA(T27) DG(N-26):DC(T26) DG(N-25):DC(T25) DT(N-24):DA(T24) DC(N-23):DG(T23) DG(N-22):DC(T22) DC(N-21):DG(T21) DC(N-20):DG(T20) DT(N-19):DA(T19) DG(N-18):DC(T18) DC(N-17):DG(T17) DG(N-16):DC(T16) DA(N-15):DT(T15) DC(N-14):DG(T14) DT(N-13):DA(T13) DA(N-12):DT(T12) DG(N-11):DC(T11) DA(N-10):DT(T10) DA(N-9):DT(T9) DT(N-8):DA(T8) DA(N-7):DT(T7) DC(N-6):DT(T6) DA(N-5):DG(T5) DC(N-4):DA(T4) DT(N-3):DG(T3) DG(N-2):DG(T2) DT(N-1):DG(T1) DG(N0):DC(T0) DC(N1):DG(T-1) DT(N2):DA(T-2) DA(N3):DT(T-3) DC(N5):DG(T-5) DA(N6):DT(T-6) DT(N7):DA(T-7) DC(N8):DG(T-8) DA(N9):DT(T-9) DT(N10):DA(T-10) DT(N11):DA(T-11) DA(N12):DT(T-12) DA(N13):DT(T-13) DC(N14):DG(T-14) DT(N15):DA(T-15) chainA chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 18 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ILE177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 22 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) TYR367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (512) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (245) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (268) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) LYS392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (351) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) GLU503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) SER517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (405) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 35) LYS36 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TRP37 0 0 0 0 0 0 0 0 21 32 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN40 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG41 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) GLN87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence teflkprlvdieqvssthakvtleplergfghtlgnalrrillssmpgcavteveidgvlheystkegvqedileillnlkglavrvqgkdeviltlnksgigpvtaadithdgdveivkpqhvichltdenasismrikvqrgrgyvpastrihseederpigrllvdacyspveriaynveaarveqrtdldklviemetngtidpeeairraatilaeqleafvdlrfdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwpp/ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiIpyrgSWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiYrmmRpgepptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveRavkerlslgdldtlmpqdminakpisaavkEffgssqlsqFmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttdpvRmyMreMgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaesidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiaKKYtNRglqfldliqegniglmkavdkfeyrRgYkfSTYaTWwirQaitRsIadqartiripvHmiEtiNklNrisRqmlqemgreptpeelaermlmpedkirkvlkiaKEpIsmeTpIgddeDShlgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtReriRqieakalrklrhpsrsevlrsfldd/tisaqvidtivewiddnlhqplriddiarhagysKWhlQRlflqykgeslgryirerklllaardlrdtdqrvydiclkygfdsQQtftRvftRtfnqppgayrke >7bef_G:Homeodomain-like; title=STRUCTURES OF CLASS II BACTERIAL TRANSCRIPTION COMPLEXES organism=KLEBSIELLA PNEUMONIAE DNA sequence DA(T-15):DT(N15) DG(T-14):DC(N14) DT(T-13):DA(N13) DT(T-12):DA(N12) DA(T-11):DT(N11) DA(T-10):DT(N10) DT(T-9):DA(N9) DG(T-8):DC(N8) DA(T-7):DT(N7) DT(T-6):DA(N6) DG(T-5):DC(N5) DT(T-3):DA(N3) DA(T-2):DT(N2) DG(T-1):DC(N1) DC(T0):DG(N0) DG(T1):DT(N-1) DG(T2):DG(N-2) DG(T3):DT(N-3) DA(T4):DC(N-4) DG(T5):DA(N-5) DT(T6):DC(N-6) DT(T7):DA(N-7) DA(T8):DT(N-8) DT(T9):DA(N-9) DT(T10):DA(N-10) DC(T11):DG(N-11) DT(T12):DA(N-12) DA(T13):DT(N-13) DG(T14):DC(N-14) DT(T15):DA(N-15) DC(T16):DG(N-16) DG(T17):DC(N-17) DC(T18):DG(N-18) DA(T19):DT(N-19) DG(T20):DC(N-20) DG(T21):DC(N-21) DC(T22):DG(N-22) DG(T23):DC(N-23) DA(T24):DT(N-24) DC(T25):DG(N-25) DC(T26):DG(N-26) DA(T27):DT(N-27) DT(T28):DA(N-28) DT(T29):DA(N-29) DT(T30):DA(N-30) DT(T31):DA(N-31) DG(T32):DC(N-32) DT(T33):DA(N-33) DT(T34):DA(N-34) DT(T35):DA(N-35) DT(T36):DA(N-36) DG(T37):DC(N-37) DT(T38):DA(N-38) DC(T39):DG(N-39) DA(T40):DT(N-40) DT(T41):DA(N-41) DT(T42):DA(N-42) DC(T43):DG(N-43) DA(T44):DT(N-44) DG(T45):DC(N-45) DT(T46):DA(N-46) DG(T47):DC(N-47) DC(T48):DG(N-48) DT(T49):DA(N-49) DA(T50):DT(N-50) DT(T51):DA(N-51) DA(T52):DT(N-52) DC(T53):DG(N-53) DC(T54):DG(N-54) DT(T55):DA(N-55) DG(T56):DC(N-56) DA(T57):DT(N-57) chainG ( 35) LYS36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 36) TRP37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 32 21 0 0 0 0 0 0 0 0 ( 39) GLN40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 ( 85) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) GLN87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tisaqvidtivewiddnlhqplriddiarhagysKWhlQRlflqykgeslgryirerklllaardlrdtdqrvydiclkygfdsQQtftRvftRtfnqppgayrke >7beg_BCDFG:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=STRUCTURES OF CLASS I BACTERIAL TRANSCRIPTION COMPLEXES organism=ESCHERICHIA COLI / KLEBSIELLA PNEUMONIAE DNA sequence DT(T-14):DA(N14) DC(T-13):DG(N13) DT(T-12):DA(N12) DT(T-11):DA(N11) DT(T-10):DA(N10) DC(T-9):DG(N9) DT(T-8):DA(N8) DA(T-7):DT(N7) DT(T-6):DA(N6) DT(T-5):DA(N5) DA(T-4):DT(N4) DT(T-3):DA(N3) DG(T-2):DC(N2) DG(T-1):DC(N1) DT(T0):DA(N0) DC(T1):DT(N-1) DA(T2):DG(N-2) DT(T3):DC(N-3) DG(T4):DA(N-4) DC(T5):DA(N-5) DT(T6):DG(N-6) DA(T7):DT(N-7) DT(T8):DA(N-8) DG(T9):DC(N-9) DG(T10):DC(N-10) DT(T11):DA(N-11) DA(T12):DT(N-12) DC(T13):DG(N-13) DA(T14):DT(N-14) DT(T15):DA(N-15) DA(T16):DT(N-16) DC(T17):DG(N-17) DA(T18):DT(N-18) DT(T19):DA(N-19) DT(T20):DA(N-20) DC(T21):DG(N-21) DA(T22):DT(N-22) DC(T23):DG(N-23) DA(T24):DT(N-24) DA(T25):DT(N-25) DA(T26):DT(N-26) DT(T27):DA(N-27) DG(T28):DC(N-28) DT(T29):DA(N-29) DA(T30):DT(N-30) DT(T31):DA(N-31) DG(T32):DC(N-32) DT(T33):DA(N-33) DA(T34):DT(N-34) DA(T35):DT(N-35) DA(T36):DT(N-36) DC(T37):DG(N-37) DG(T38):DC(N-38) DT(T39):DA(N-39) DA(T40):DT(N-40) DA(T41):DT(N-41) DC(T42):DG(N-42) DC(T43):DG(N-43) DT(T44):DA(N-44) DC(T45):DG(N-45) DT(T46):DA(N-46) DG(T47):DC(N-47) DT(T48):DA(N-48) DA(T49):DT(N-49) DA(T50):DT(N-50) DA(T51):DT(N-51) DG(T52):DC(N-52) DT(T53):DA(N-53) DC(T54):DG(N-54) DA(T55):DT(N-55) DT(T56):DA(N-56) DT(T57):DA(N-57) DA(T58):DT(N-58) DA(T59):DT(N-59) DC(T60):DG(N-60) DC(T61):DG(N-61) DT(T62):DA(N-62) DA(T63):DT(N-63) DT(T64):DA(N-64) DG(T65):DC(N-65) DG(T66):DC(N-66) DC(T67):DG(N-67) DA(T68):DT(N-68) DC(T69):DG(N-69) DG(T70):DC(N-70) DA(T71):DT(N-71) DA(T72):DT(N-72) DA(T73):DT(N-73) DA(T74):DT(N-74) DA(T75):DT(N-75) DC(T76):DG(N-76) DC(T77):DG(N-77) DA(T78):DT(N-78) DA(T79):DT(N-79) chainB chainC (142) ARG143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) TYR367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (496) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1272) MET1273 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (268) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) PHE427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) GLU503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) SER517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (466) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 92) THR94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 prot.sequence teflkprlvdieqvssthakvtleplergfghtlgnalrrillssmpgcavteveidgvlheystkegvqedileillnlkglavrvqgkdeviltlnksgigpvtaadithdgdveivkpqhvichltdenasismrikvqrgrgyvpastrihseederpigrllvdacyspveriaynveaarveqrtdldklviemetngtidpeeairraatilaeqleafvdfdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp/vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingteRvivsqlhrspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvridRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiYrmmRpgEPptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveravkerlslgdldtlmpqdminakPisaavkEffgssqlsqFmdqnnplseithkrrisalgpggltrEragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgeMevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsNKrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttdpvRmyMreMgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaesidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNRglqfldliqegniglmkavdkfEyrRgykFSTYaTWWirQaiTrsIadqartiripVHmietiNklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakEpIsmetpIgdDeDShlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvTrERirqieakalrklrhpsrsevlrsfldd/tisaqvidtivewiddnlhqplriddiarhagyskwhlqrlflqykgeslgryirerklllaardlrdtdqrvydiclkygfdsqqtftvfTrtfnqppgayrke >7bg9_A:DNA/RNA_polymerases; title=THE CATALYTIC CORE LOBE OF HUMAN TELOMERASE IN COMPLEX WITH A TELOMERIC DNA SUBSTRATE organism=HOMO SAPIENS DNA sequence DT(N13) DT(N14) DA(N15) DG(N16) DG(N17) DG(N18) chainA (530) LYS749 3 0 0 0 0 0 (533) HIS752 3 0 0 0 0 0 (758) VAL977 0 1 0 0 0 0 (761) LEU980 0 9 4 0 0 0 prot.sequence rsllrshyrevlplatfvrrlgpqgwrlvqrgdpaafralvaqclvcvpwclkelvarvlqrlcergaknvlafgntvtdalrgsgawglllrrvgddvlvhllarcalfvlvapscayqvcgpplyqlgppvyaetkhflyssgdkeqlrpsfllsslrpsltgarrlvetiflgsrpwmpgtprrlprlpqrywqmrplflellgnhaqcpygvllkthcpldprrlvqllrqhsspwqvygfvraclrrlvppglwgsrhnerrflrntkkfislgkhaklslqeltwkmsvrdcawlrrspgvgcvpaaehrlreeilakflhwlmsvyvvellrsffyvtettfqknrlffyrksvwsklqsigirqhlkrvqlrelseaevrqhrearpalltsrlrfipkpdglrpivnmdyvvgartfrrekraerltsrvkalfsvlnyerarrpgllgasvlglddihrawrtfvlrvraqdpppelyfvkvdvtgaydtipqdrlteviasiikpqntycvrryavvqKaaHghvrkafkshvstltdlqpymrqfvahlqetsplrdavvieqssslneassglfdvflrfmchhavrirgksyvqcqgipqgsilstllcslcygdmenklfagirrdglllrlvddfllvtphlthaktflrtlvrgvpeygcvvnlrktvvnfpvedealggtafvqmpahglfpwcgllldtrtlevqsdyssyartsirasltfnrgfkagrnmrrklfgVlrLkchslfldlqvnslqtvctniykilllqayrfhacvlqlpfhqqvwknptfflrvisdtaslcysilkaknagmslgakgaagplpseavqwlchqafllkltrhrvtyvpllgslrtaqtqlsrklpgttltaleaaanpalpsdfktild >7bhy_A:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=DNA-BINDING DOMAIN OF DEOR IN COMPLEX WITH THE DNA OPERATOR organism=Bacillus subtilis subsp. subtilis str. 168 DNA sequence DT(E1):DA(G15) DT(E2):DA(G14) DG(E3):DC(G13) DA(E4):DT(G12) DA(E5):DT(G11) DT(E6):DA(G10) DT(E7):DA(G9) DT(E8):DA(G8) DT(E9):DA(G7) DG(E10):DC(G6) DT(E11):DA(G5) DT(E12):DA(G4) DC(E13):DG(G3) DA(E14):DT(G2) DA(E15):DT(G1) chainA ( 35) SER33 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 36) ARG34 0 0 0 0 0 0 0 0 16 11 1 0 0 0 0 ( 37) PRO35 0 0 0 0 0 0 0 0 0 0 3 3 3 0 0 ( 40) SER38 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 41) ARG39 0 0 0 0 0 0 0 0 0 0 3 5 12 9 0 prot.sequence snaasekqqlsieaarlyyqsdysqqqiaeqlniSRPtvSRllqyakekgyvqirvm >7bhy_AB:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=DNA-BINDING DOMAIN OF DEOR IN COMPLEX WITH THE DNA OPERATOR organism=Bacillus subtilis subsp. subtilis str. 168 DNA sequence DT(E1):DA(G15) DT(E2):DA(G14) DG(E3):DC(G13) DA(E4):DT(G12) DA(E5):DT(G11) DT(E6):DA(G10) DT(E7):DA(G9) DT(E8):DA(G8) DT(E9):DA(G7) DG(E10):DC(G6) DT(E11):DA(G5) DT(E12):DA(G4) DC(E13):DG(G3) DA(E14):DT(G2) DA(E15):DT(G1) chainA ( 35) SER33 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 36) ARG34 0 0 0 0 0 0 0 0 16 11 1 0 0 0 0 ( 37) PRO35 0 0 0 0 0 0 0 0 0 0 3 3 3 0 0 ( 40) SER38 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 41) ARG39 0 0 0 0 0 0 0 0 0 0 3 5 12 9 0 chainB ( 21) GLN23 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 31) SER33 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG34 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 ( 33) PRO35 0 2 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR36 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER38 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 37) ARG39 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence snaasekqqlsieaarlyyqsdysqqqiaeqlniSRPtvSRllqyakekgyvqirvm/sekqqlsieaarlyyqsdysQqqiaeqlniSRPTvSRllqyakekgyvqirvm >7bil_AB:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF HELICASE PIF1 FROM THERMUS OSHIMAI IN COMPLEX WITH OLIGO GGTTTGGTTTGGTT organism=Thermus oshimai JL-2 DNA sequence DT(C13) DG(C12) DG(C11) DT(C10) DT(C9) DG(C1) DG(C2) DT(C3) DT(C4) DT(C5) DG(C6) DG(C7):DT(C9) DT(C8) chainA ( 65) HIS131 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 72) ALA138 0 0 0 0 0 0 0 0 0 5 9 0 0 (150) VAL216 0 0 0 0 0 0 0 11 14 0 0 0 0 (152) PRO218 0 0 0 0 0 0 0 2 2 0 0 0 0 (236) ARG302 0 0 0 0 0 0 3 0 0 0 0 0 0 (237) ARG303 0 0 0 0 0 0 0 0 1 0 0 0 0 (289) ARG355 0 0 0 0 0 0 0 0 0 0 10 14 0 (292) PRO358 0 0 0 0 0 0 0 0 0 0 0 0 4 (293) LEU359 0 0 0 0 0 0 0 0 0 0 0 0 1 (296) TYR362 0 0 0 0 0 0 0 0 0 0 0 0 1 (326) ARG392 0 0 0 0 0 0 0 0 0 0 0 0 15 (328) PHE394 0 0 0 0 0 0 0 0 0 0 0 15 16 (329) VAL395 0 0 0 0 0 0 0 0 0 0 0 3 0 (330) TRP396 0 0 0 0 0 0 0 0 0 0 12 0 0 (331) GLU397 0 0 0 0 0 0 0 0 0 0 4 0 0 (366) HIS432 0 0 0 0 0 0 0 1 0 0 0 0 0 (385) PHE451 0 0 0 0 0 0 26 5 0 0 0 0 0 chainB ( 65) HIS131 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 72) ALA138 7 5 0 0 0 0 0 0 0 0 0 0 0 (111) ARG177 0 1 7 0 0 0 0 0 0 0 0 0 0 (150) VAL216 0 0 20 15 0 0 0 0 0 0 0 0 0 (152) PRO218 0 0 4 1 0 0 0 0 0 0 0 0 0 (236) ARG302 0 0 0 0 4 0 0 0 0 0 0 4 0 (289) ARG355 7 0 0 0 0 0 0 0 0 0 0 0 0 (330) TRP396 12 0 0 0 0 0 0 0 0 0 0 0 0 (366) HIS432 0 0 0 2 0 0 0 0 0 0 0 0 0 (385) PHE451 0 0 0 3 28 0 0 0 0 0 0 28 0 prot.sequence glsseqqraflavtqtphpahlitgpagtgkttllyalqefykgravtlaptgtaalqargqtvHsffrfpArllryrhpedirppgphsplrkaieqmevlildevgmvrvdlleamdwalrktrkrleepfggvkvlllgdtrqlepVvPggeealyiartwggpfffqahvweevalrvhrlwesqrqredplfaellkrlrqgdpqaletlnraavrpdggeepgtliltpRRkeadalnlkrlealpgkpleyqaqvkgefaetdfpteaaltlkkgaqvillRndPLgeYfngdlgwvedleaealavrlkrngrrvviRpFVWEkivytydsereeikpqvvgtfrqvpvrlawaltvHkaqgltldkvhlelgrglFahgqlyvaltrvrrlqdlslsrpiaptellwrpevevfetriqegiwqksh/glsseqqraflavtqtphpahlitgpagtgkttllyalqefykgravtlaptgtaalqargqtvHsffrfPArllryrhpedirppgphsplrkaieqmevlildevgmvRvdlleamdwalrktrkrleepfggvkvlllgdtrqlepVvPggeealyiartwggpfffqahvweevalrvhrlwesqrqredplfaellkrlrqgdpqaletlnraavrpdggeepgtliltpRrkeadalnlkrlealpgkpleyqaqvkgefaetdfpteaaltlkkgaqvillRndplgeyfngdlgwvedleaealavrlkrngrrvvirpfvWekivytydsereeikpqvvgtfrqvpvrlawaltvHkaqgltldkvhlelgrglFahgqlyvaltrvrrlqdlslsrpiaptellwrpevevfetriqegiwqksh >7bil_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF HELICASE PIF1 FROM THERMUS OSHIMAI IN COMPLEX WITH OLIGO GGTTTGGTTTGGTT organism=Thermus oshimai JL-2 DNA sequence DT(C13) DG(C12) DG(C11) DT(C10) DT(C9) DG(C1) DG(C2) DT(C3) DT(C4) DT(C5) DG(C6) DG(C7):DT(C9) DT(C8) chainB ( 65) HIS131 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 72) ALA138 7 5 0 0 0 0 0 0 0 0 0 0 0 (111) ARG177 0 1 7 0 0 0 0 0 0 0 0 0 0 (150) VAL216 0 0 20 15 0 0 0 0 0 0 0 0 0 (152) PRO218 0 0 4 1 0 0 0 0 0 0 0 0 0 (236) ARG302 0 0 0 0 4 0 0 0 0 0 0 4 0 (289) ARG355 7 0 0 0 0 0 0 0 0 0 0 0 0 (330) TRP396 12 0 0 0 0 0 0 0 0 0 0 0 0 (366) HIS432 0 0 0 2 0 0 0 0 0 0 0 0 0 (385) PHE451 0 0 0 3 28 0 0 0 0 0 0 28 0 prot.sequence glsseqqraflavtqtphpahlitgpagtgkttllyalqefykgravtlaptgtaalqargqtvHsffrfPArllryrhpedirppgphsplrkaieqmevlildevgmvRvdlleamdwalrktrkrleepfggvkvlllgdtrqlepVvPggeealyiartwggpfffqahvweevalrvhrlwesqrqredplfaellkrlrqgdpqaletlnraavrpdggeepgtliltpRrkeadalnlkrlealpgkpleyqaqvkgefaetdfpteaaltlkkgaqvillRndplgeyfngdlgwvedleaealavrlkrngrrvvirpfvWekivytydsereeikpqvvgtfrqvpvrlawaltvHkaqgltldkvhlelgrglFahgqlyvaltrvrrlqdlslsrpiaptellwrpevevfetriqegiwqksh >7bjq_A:DHH_phosphoesterases; title=CRYSTAL STRUCTURE OF RECJCDC45 FROM METHANOTHERMOBACTER THERMOAUTOTROFICUS IN COMPLEX WITH SSDNA organism=? DNA sequence DG(E5):DC(D6) DC(E6):DG(D5) DC(F1):DG(D4) DA(F2):DT(D3) DT(F3):DA(D2) DG(F4):DC(E1) DG(F5):DC(G6) DC(F6):DG(G5) chainA ( 60) SER72 0 0 0 0 0 0 2 4 ( 61) ARG73 0 0 0 0 0 0 0 10 prot.sequence lpdsilkrgaeaskvleehlergniiriishndadglsaagvvaraissmngqfhisilSRlkkefikklsgekyslfffcdmgsayleeisrlkgdvivadhhqpseseagphvvhinphlhgldgsrdlsasgtaylatrllnrktaplalvgalgdmqytdgftganrfimeeaveegvlqvhsdlklasryteplyrsiaytfnpalpgltgdmeasmgflenigvsygvkypdlspeerdvlrdeltrinpeifgevftsrefrnigdlsdiagvldacgknrkygigiglclgeregaldvalelqknyreelvkglawirregsttlenlqyiysedkafkgimgtiasislslkildpdipllglsrmdqhvkvsarttrpavergvnlgvalrdaaasfggtggghdiaagamvpyrdmesflqlvdeilgtqtgp >7bjq_AB: title=CRYSTAL STRUCTURE OF RECJCDC45 FROM METHANOTHERMOBACTER THERMOAUTOTROFICUS IN COMPLEX WITH SSDNA organism=? DNA sequence DG(E5):DC(D6) DC(E6):DG(D5) DC(F1):DG(D4) DA(F2):DT(D3) DT(F3):DA(D2) DG(F4):DC(E1) DG(F5):DC(G6) DC(F6):DG(G5) chainA ( 60) SER72 0 0 0 0 0 0 2 4 ( 61) ARG73 0 0 0 0 0 0 0 10 chainB ( 61) ARG73 7 1 0 0 0 1 0 0 (411) THR423 3 3 0 0 0 0 0 0 prot.sequence lpdsilkrgaeaskvleehlergniiriishndadglsaagvvaraissmngqfhisilSRlkkefikklsgekyslfffcdmgsayleeisrlkgdvivadhhqpseseagphvvhinphlhgldgsrdlsasgtaylatrllnrktaplalvgalgdmqytdgftganrfimeeaveegvlqvhsdlklasryteplyrsiaytfnpalpgltgdmeasmgflenigvsygvkypdlspeerdvlrdeltrinpeifgevftsrefrnigdlsdiagvldacgknrkygigiglclgeregaldvalelqknyreelvkglawirregsttlenlqyiysedkafkgimgtiasislslkildpdipllglsrmdqhvkvsarttrpavergvnlgvalrdaaasfggtggghdiaagamvpyrdmesflqlvdeilgtqtgp/lpdsilkrgaeaskvleehlergniiriishndadglsaagvvaraissmngqfhisilsRlkkefikklsgekyslfffcdmgsayleeisrlkgdvivadhhqpseseagphvvhinphlhgldgsrdlsasgtaylatrllnrktaplalvgalgdmqytdgftganrfimeeaveegvlqvhsdlklasryteplyrsiaytfnpalpgltgdmeasmgflenigvsygvkypdlspeerdvlrdeltrinpeifgevftsrefrnigdlsdiagvldacgknrkygigiglclgeregaldvalelqknyreelvkglawirregsttlenlqyiysedkafkgimgtiasislslkildpdipllglsrmdqhvkvsarttrpavergvnlgvalrdaaasfggTggghdiaagamvpyrdmesflqlvdeilgtqtgp >7btq_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=ECOR124I-DNA IN THE RESTRICTION-ALLEVIATION STATE organism=ESCHERICHIA COLI DNA sequence DG(C-14):DC(B27) DG(C-13):DC(B26) DT(C-12):DA(B25) DT(C-11):DA(B24) DT(C-10):DA(B23) DT(C-9):DA(B22) DT(C-8):DA(B21) DC(C-7):DG(B20) DT(C-6):DA(B19) DC(C-5):DG(B18) DT(C-4):DA(B17) DT(C-3):DA(B16) DT(C-2):DA(B15) DT(C-1):DA(B14) DT(C0):DA(B13) DC(C1):DG(B12) DG(C2):DC(B11) DA(C3):DT(B10) DC(C4):DG(B9) DC(C5):DG(B8) DT(C6):DA(B7) DC(C7):DG(B6) DG(C8):DC(B5) DA(C9):DT(B4) DA(C10):DT(B3) DT(C11):DA(B2) DT(C12):DA(B1) DC(C13):DG(B0) DG(C14):DC(B-1) DA(C15):DT(B-2) DT(C16):DA(B-3) DT(C17):DA(B-4) DT(C18):DA(B-5) DT(C19):DA(B-6) DA(C20):DT(B-7) DG(C21):DC(B-8) DA(C22):DT(B-9) DT(C23):DA(B-10) DT(C24):DA(B-11) DT(C25):DA(B-12) DT(C26):DA(B-13) DT(C27):DA(B-14) DG(C28):DC(B-15) DG(C29):DC(B-16) chainA (163) PHE199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ASN302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) TYR305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) THR395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (360) THR396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) ILE397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aelhrqiwqiandvrgsvdgwdfkqyvlgalfyrfisenfssyieagtddikddaiktkgyfiypsqlfcnvaakantndrlnadlnsifvaiessaygypseadikglfadfdttsnrlgntvkdknarlaavlkgveglklgidlfgdayeflisnyaaeFftpqhvskliaqlamhgqthvnkiydpaagsgslllqakkqfdnhiieegffgqeinhttynlarmnmflhninydkfdiklgntltephfrdekpfdaivsNppYsvkwigsddptlinderfapagvlapkskadfafvlhalnylsakgraaivcfpgifyrggaeqkirqylvdnnyvetvislapnlffgTTIavnilvlskhktdtnvqfidaselfkketnnniltdahieqimqvfaskedvahlaksvafetvvandynlsvssyveakdnreiidiaelnaelkttvskidqlrkdidaiv >7btq_ADE:S-adenosyl-L-methionine-dependent_methyltransferases; title=ECOR124I-DNA IN THE RESTRICTION-ALLEVIATION STATE organism=ESCHERICHIA COLI DNA sequence DG(C-14):DC(B27) DG(C-13):DC(B26) DT(C-12):DA(B25) DT(C-11):DA(B24) DT(C-10):DA(B23) DT(C-9):DA(B22) DT(C-8):DA(B21) DC(C-7):DG(B20) DT(C-6):DA(B19) DC(C-5):DG(B18) DT(C-4):DA(B17) DT(C-3):DA(B16) DT(C-2):DA(B15) DT(C-1):DA(B14) DT(C0):DA(B13) DC(C1):DG(B12) DG(C2):DC(B11) DA(C3):DT(B10) DC(C4):DG(B9) DC(C5):DG(B8) DT(C6):DA(B7) DC(C7):DG(B6) DG(C8):DC(B5) DA(C9):DT(B4) DA(C10):DT(B3) DT(C11):DA(B2) DT(C12):DA(B1) DC(C13):DG(B0) DG(C14):DC(B-1) DA(C15):DT(B-2) DT(C16):DA(B-3) DT(C17):DA(B-4) DT(C18):DA(B-5) DT(C19):DA(B-6) DA(C20):DT(B-7) DG(C21):DC(B-8) DA(C22):DT(B-9) DT(C23):DA(B-10) DT(C24):DA(B-11) DT(C25):DA(B-12) DT(C26):DA(B-13) DT(C27):DA(B-14) DG(C28):DC(B-15) DG(C29):DC(B-16) chainA (163) PHE199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ASN302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) TYR305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) THR395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (360) THR396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) ILE397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (163) PHE199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (268) PRO304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) TYR305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) THR395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) ILE397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 17) GLN29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) PHE80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) LYS99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) LYS131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) SER260 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) ARG274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 20 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) SER275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) GLN295 0 0 0 0 0 0 0 0 0 0 0 0 0 5 15 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) ASP296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) VAL333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (322) ALA334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aelhrqiwqiandvrgsvdgwdfkqyvlgalfyrfisenfssyieagtddikddaiktkgyfiypsqlfcnvaakantndrlnadlnsifvaiessaygypseadikglfadfdttsnrlgntvkdknarlaavlkgveglklgidlfgdayeflisnyaaeFftpqhvskliaqlamhgqthvnkiydpaagsgslllqakkqfdnhiieegffgqeinhttynlarmnmflhninydkfdiklgntltephfrdekpfdaivsNppYsvkwigsddptlinderfapagvlapkskadfafvlhalnylsakgraaivcfpgifyrggaeqkirqylvdnnyvetvislapnlffgTTIavnilvlskhktdtnvqfidaselfkketnnniltdahieqimqvfaskedvahlaksvafetvvandynlsvssyveakdnreiidiaelnaelkttvskidqlrkdidaiv/aelhrqiwqiandvrgsvdgwdfkqyvlgalfyrfisenfssyieagtddikddaiktkgyfiypsqlfcnvaakantndrlnadlnsifvaiessaygypseadikglfadfdttsnrlgntvkdknarlaavlkgveglklgidlfgdayeflisnyaaeFftpqhvskliaqlamhgqthvnkiydpaagsgslllqakkqfdnhiieegffgqeinhttynlarmnmflhninydkfdiklgntltephfrdekpfdaivsnpPYsvkwigsddptlinderfapagvlapkskadfafvlhalnylsakgraaivcfpgifyrggaeqkirqylvdnnyvetvislapnlffgTtIavnilvlskhktdtnvqfidaselfkketnnniltdahieqimqvfaskedvahlaksvafetvvandynlsvssyveakdnreiidiaelnaelkttvskidqlrkdidaiv/gvevewlplgeitkyeQptkYlvkakdyhdtytipvltagktfilgytnethgiyqaskapviifdDFTtankwvdfdfkakssamKmvtscddnktllkyvyywlntlpsefaegdhKrqwisnysqkkipipcpdnpekslaiqseivrildkftaltaeltaelnmrkkqynyyrdqllsfkegevewktlgeigkwygggtpsknkiefwengsipwispkdmgrtlvdssedyiteeavlhsStklipansiaivvRSsildkvlpsalikvpatlnQDmkaviphenilvkyiyhmigsrgsdilraakktggsVAsidskklfsfkipvpnineqqriveildkfdtltnsiteglpreielrqkqyeyyrdllfsf >7bwd_L:Ubiquitin-like; title=STRUCTURE OF DOT1L-H2BK34UB NUCLEOSOME COMPLEX organism=HOMO SAPIENS DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainL ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyniqkestlhlvlRlrgc >7by0_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE CRYO-EM STRUCTURE OF CENP-A NUCLEOSOME IN COMPLEX WITH THE PHOSPHORYLATED CENP-C organism=GALLUS GALLUS / HOMO SAPIENS DNA sequence DT(I2):DA(J289) DC(I3):DG(J288) DA(I4):DT(J287) DG(I5):DC(J286) DA(I6):DT(J285) DA(I7):DT(J284) DT(I8):DA(J283) DC(I9):DG(J282) DC(I10):DG(J281) DC(I11):DG(J280) DG(I12):DC(J279) DG(I13):DC(J278) DT(I14):DA(J277) DG(I15):DC(J276) DC(I16):DG(J275) DC(I17):DG(J274) DG(I18):DC(J273) DA(I19):DT(J272) DG(I20):DC(J271) DG(I21):DC(J270) DC(I22):DG(J269) DC(I23):DG(J268) DG(I24):DC(J267) DC(I25):DG(J266) DT(I26):DA(J265) DC(I27):DG(J264) DA(I28):DT(J263) DA(I29):DT(J262) DT(I31):DA(J261) DG(I33):DC(J259) DT(I34):DA(J257) DC(I35):DG(J256) DG(I36):DC(J255) DT(I37):DA(J254) DA(I38):DT(J253) DG(I39):DC(J252) DA(I40):DT(J251) DC(I41):DG(J250) DA(I42):DT(J249) DG(I43):DC(J248) DC(I44):DG(J247) DT(I45):DA(J246) DC(I46):DG(J245) DT(I47):DA(J244) DA(I48):DT(J243) DG(I49):DC(J242) DC(I50):DG(J241) DA(I51):DT(J240) DC(I52):DG(J239) DC(I53):DG(J238) DG(I54):DC(J237) DC(I55):DG(J236) DT(I56):DA(J235) DT(I57):DA(J234) DA(I58):DT(J233) DA(I59):DT(J232) DA(I60):DT(J231) DC(I61):DG(J230) DG(I62):DC(J229) DC(I63):DG(J228) DA(I64):DT(J227) DC(I65):DG(J226) DG(I66):DC(J225) DT(I67):DA(J224) DA(I68):DT(J223) DC(I69):DG(J222) DG(I70):DC(J221) DC(I71):DG(J220) DG(I72):DC(J219) DC(I73):DG(J218) DT(I74):DA(J217) DG(I75):DC(J216) DT(I76):DA(J215) DC(I77):DG(J214) DC(I78):DG(J213) DC(I79):DG(J212) DC(I80):DG(J211) DC(I81):DG(J210) DG(I82):DC(J209) DC(I83):DG(J208) DG(I84):DC(J207) DT(I85):DA(J206) DT(I86):DA(J205) DT(I87):DA(J204) DT(I88):DA(J203) DA(I89):DT(J202) DA(I90):DT(J201) DC(I91):DG(J200) DC(I92):DG(J199) DG(I93):DC(J198) DC(I94):DG(J197) DC(I95):DG(J196) DA(I97):DT(J195) DG(I98):DC(J193) DG(I99):DC(J192) DG(I100):DC(J191) DG(I101):DC(J190) DA(I102):DT(J189) DT(I103):DA(J188) DT(I104):DA(J187) DA(I105):DT(J186) DC(I106):DG(J185) DT(I107):DA(J184) DC(I108):DG(J183) DC(I109):DG(J182) DC(I110):DG(J181) DT(I111):DA(J180) DA(I112):DT(J179) DG(I113):DC(J178) DT(I114):DA(J177) DC(I115):DG(J176) DT(I116):DA(J175) DC(I117):DG(J174) DC(I118):DG(J173) DA(I119):DT(J172) DG(I120):DC(J171) DG(I121):DC(J170) DC(I122):DG(J169) DA(I123):DT(J168) DC(I124):DG(J167) DG(I125):DC(J166) DT(I126):DA(J165) DG(I127):DC(J164) DT(I128):DA(J163) DC(I129):DG(J162) DA(I130):DT(J161) DG(I131):DC(J160) DA(I132):DT(J159) DT(I133):DA(J158) DA(I134):DT(J157) DT(I135):DA(J156) DT(I137):DT(J155) DA(I138):DT(J153) DC(I139):DG(J152) DA(I140):DT(J151) DT(I141):DA(J150) DC(I142):DG(J149) DG(I143):DC(J148) chainA ( 29) GLN66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ILE39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence kphryrpgtvalreirryqkstellirrQpfarvvreicllftrgvdyRwqamallalqeaaeaflvhlledaylcslharrvtlypkdlqlarrlrglqgeg/rdniqgitkpairrlarrggvkrisgliYeetrgvlkvflenvirdavTytehakrktvtamdvvyalkrqgrtlygf/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHryrpgTvalreirryqkstellirrqpfarvvreicllftrgvdyrwqamallalqeaaeaflvhlledaylcslharrvtlypkdlqlarrlrglqgeg/rdNiqgitKpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/RakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtAvrlllpgelakhavsegtkavtkytsa >7by0_C:Histone-fold; title=THE CRYO-EM STRUCTURE OF CENP-A NUCLEOSOME IN COMPLEX WITH THE PHOSPHORYLATED CENP-C organism=HOMO SAPIENS DNA sequence DT(I2):DA(J289) DC(I3):DG(J288) DA(I4):DT(J287) DG(I5):DC(J286) DA(I6):DT(J285) DA(I7):DT(J284) DT(I8):DA(J283) DC(I9):DG(J282) DC(I10):DG(J281) DC(I11):DG(J280) DG(I12):DC(J279) DG(I13):DC(J278) DT(I14):DA(J277) DG(I15):DC(J276) DC(I16):DG(J275) DC(I17):DG(J274) DG(I18):DC(J273) DA(I19):DT(J272) DG(I20):DC(J271) DG(I21):DC(J270) DC(I22):DG(J269) DC(I23):DG(J268) DG(I24):DC(J267) DC(I25):DG(J266) DT(I26):DA(J265) DC(I27):DG(J264) DA(I28):DT(J263) DA(I29):DT(J262) DT(I31):DA(J261) DG(I33):DC(J259) DT(I34):DA(J257) DC(I35):DG(J256) DG(I36):DC(J255) DT(I37):DA(J254) DA(I38):DT(J253) DG(I39):DC(J252) DA(I40):DT(J251) DC(I41):DG(J250) DA(I42):DT(J249) DG(I43):DC(J248) DC(I44):DG(J247) DT(I45):DA(J246) DC(I46):DG(J245) DT(I47):DA(J244) DA(I48):DT(J243) DG(I49):DC(J242) DC(I50):DG(J241) DA(I51):DT(J240) DC(I52):DG(J239) DC(I53):DG(J238) DG(I54):DC(J237) DC(I55):DG(J236) DT(I56):DA(J235) DT(I57):DA(J234) DA(I58):DT(J233) DA(I59):DT(J232) DA(I60):DT(J231) DC(I61):DG(J230) DG(I62):DC(J229) DC(I63):DG(J228) DA(I64):DT(J227) DC(I65):DG(J226) DG(I66):DC(J225) DT(I67):DA(J224) DA(I68):DT(J223) DC(I69):DG(J222) DG(I70):DC(J221) DC(I71):DG(J220) DG(I72):DC(J219) DC(I73):DG(J218) DT(I74):DA(J217) DG(I75):DC(J216) DT(I76):DA(J215) DC(I77):DG(J214) DC(I78):DG(J213) DC(I79):DG(J212) DC(I80):DG(J211) DC(I81):DG(J210) DG(I82):DC(J209) DC(I83):DG(J208) DG(I84):DC(J207) DT(I85):DA(J206) DT(I86):DA(J205) DT(I87):DA(J204) DT(I88):DA(J203) DA(I89):DT(J202) DA(I90):DT(J201) DC(I91):DG(J200) DC(I92):DG(J199) DG(I93):DC(J198) DC(I94):DG(J197) DC(I95):DG(J196) DA(I97):DT(J195) DG(I98):DC(J193) DG(I99):DC(J192) DG(I100):DC(J191) DG(I101):DC(J190) DA(I102):DT(J189) DT(I103):DA(J188) DT(I104):DA(J187) DA(I105):DT(J186) DC(I106):DG(J185) DT(I107):DA(J184) DC(I108):DG(J183) DC(I109):DG(J182) DC(I110):DG(J181) DT(I111):DA(J180) DA(I112):DT(J179) DG(I113):DC(J178) DT(I114):DA(J177) DC(I115):DG(J176) DT(I116):DA(J175) DC(I117):DG(J174) DC(I118):DG(J173) DA(I119):DT(J172) DG(I120):DC(J171) DG(I121):DC(J170) DC(I122):DG(J169) DA(I123):DT(J168) DC(I124):DG(J167) DG(I125):DC(J166) DT(I126):DA(J165) DG(I127):DC(J164) DT(I128):DA(J163) DC(I129):DG(J162) DA(I130):DT(J161) DG(I131):DC(J160) DA(I132):DT(J159) DT(I133):DA(J158) DA(I134):DT(J157) DT(I135):DA(J156) DT(I137):DT(J155) DA(I138):DT(J153) DC(I139):DG(J152) DA(I140):DT(J151) DT(I141):DA(J150) DC(I142):DG(J149) DG(I143):DC(J148) chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >7bzg_AB:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF BACILLUS SUBTILIS HXLR, WILD TYPE IN COMPLEX WITH FORMALDEHYDE AND DNA organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DC(C1):DG(D20) DA(C2):DT(D19) DG(C3):DC(D18) DT(C4):DA(D17) DA(C5):DT(D16) DT(C6):DA(D15) DC(C7):DG(D14) DC(C8):DG(D13) DT(C9):DA(D12) DC(C10):DG(D11) DG(C11):DC(D10) DA(C12):DT(D9) DG(C13):DC(D8) DG(C14):DC(D7) DA(C15):DT(D6) DT(C16):DA(D5) DA(C17):DT(D4) DC(C18):DG(D3) DT(C19):DA(D2) DG(C20):DC(D1) chainA ( 39) PHE40 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ASN41 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN52 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LYS53 0 0 0 0 4 6 12 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ILE54 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) VAL56 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) PRO78 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 39) PHE40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 ( 40) ASN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 ( 50) THR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 51) GLN52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 11 0 0 ( 52) LYS53 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 3 0 0 0 0 ( 53) ILE54 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 55) VAL56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 77) PRO78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 prot.sequence srmddkrfncekeltlaviggkwkmlilwhlgkegtkrFNelktlipditQKIlVnqlreleqdmivhrevypvvpPkveysltphgeslmpileamyewgkgymelidi/srmddkrfncekeltlaviggkwkmlilwhlgkegtkrFNelktlipdiTQKIlVnqlreleqdmivhrevypvvpPkveysltphgeslmpileamyewgkgymelidi >7bzg_B:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF BACILLUS SUBTILIS HXLR, WILD TYPE IN COMPLEX WITH FORMALDEHYDE AND DNA organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DC(C1):DG(D20) DA(C2):DT(D19) DG(C3):DC(D18) DT(C4):DA(D17) DA(C5):DT(D16) DT(C6):DA(D15) DC(C7):DG(D14) DC(C8):DG(D13) DT(C9):DA(D12) DC(C10):DG(D11) DG(C11):DC(D10) DA(C12):DT(D9) DG(C13):DC(D8) DG(C14):DC(D7) DA(C15):DT(D6) DT(C16):DA(D5) DA(C17):DT(D4) DC(C18):DG(D3) DT(C19):DA(D2) DG(C20):DC(D1) chainB ( 39) PHE40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 ( 40) ASN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 ( 50) THR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 51) GLN52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 11 0 0 ( 52) LYS53 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 3 0 0 0 0 ( 53) ILE54 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 55) VAL56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 77) PRO78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 prot.sequence srmddkrfncekeltlaviggkwkmlilwhlgkegtkrFNelktlipdiTQKIlVnqlreleqdmivhrevypvvpPkveysltphgeslmpileamyewgkgymelidi >7bzg_EF:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF BACILLUS SUBTILIS HXLR, WILD TYPE IN COMPLEX WITH FORMALDEHYDE AND DNA organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DC(G1):DG(H20) DA(G2):DT(H19) DG(G3):DC(H18) DT(G4):DA(H17) DA(G5):DT(H16) DT(G6):DA(H15) DC(G7):DG(H14) DC(G8):DG(H13) DT(G9):DA(H12) DC(G10):DG(H11) DG(G11):DC(H10) DA(G12):DT(H9) DG(G13):DC(H8) DG(G14):DC(H7) DA(G15):DT(H6) DT(G16):DA(H5) DA(G17):DT(H4) DC(G18):DG(H3) DT(G19):DA(H2) DG(G20):DC(H1) chainE ( 39) PHE40 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ASN41 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN52 0 3 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LYS53 0 0 0 0 4 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ILE54 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) VAL56 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) PRO78 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 39) PHE40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 ( 40) ASN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 50) THR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 51) GLN52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 10 0 0 ( 52) LYS53 0 0 0 0 0 0 0 0 0 0 0 0 1 7 8 3 0 0 0 0 ( 53) ILE54 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 77) PRO78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 prot.sequence srmddkrfncekeltlaviggkwkmlilwhlgkegtkrFNelktlipditQKIlVnqlreleqdmivhrevypvvpPkveysltphgeslmpileamyewgkgymelidi/srmddkrfncekeltlaviggkwkmlilwhlgkegtkrFNelktlipdiTQKIlvnqlreleqdmivhrevypvvpPkveysltphgeslmpileamyewgkgymelidi >7bzg_IJ:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF BACILLUS SUBTILIS HXLR, WILD TYPE IN COMPLEX WITH FORMALDEHYDE AND DNA organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DC(L1):DG(K20) DA(L2):DT(K19) DG(L3):DC(K18) DT(L4):DA(K17) DA(L5):DT(K16) DT(L6):DA(K15) DC(L7):DG(K14) DC(L8):DG(K13) DT(L9):DA(K12) DC(L10):DG(K11) DG(L11):DC(K10) DA(L12):DT(K9) DG(L13):DC(K8) DG(L14):DC(K7) DA(L15):DT(K6) DT(L16):DA(K5) DA(L17):DT(K4) DC(L18):DG(K3) DT(L19):DA(K2) DG(L20):DC(K1) chainI ( 39) PHE40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 40) ASN41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 50) THR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 51) GLN52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 3 0 ( 52) LYS53 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 4 0 0 0 0 ( 53) ILE54 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 ( 55) VAL56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 77) PRO78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 chainJ ( 40) ASN41 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) THR51 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLN52 0 0 6 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LYS53 0 0 0 1 2 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ILE54 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) PRO78 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence srmddkrfncekeltlaviggkwkmlilwhlgkegtkrFNelktlipdiTQKIlVnqlreleqdmivhrevypvvpPkveysltphgeslmpileamyewgkgymelidi/srmddkrfncekeltlaviggkwkmlilwhlgkegtkrfNelktlipdiTQKIlvnqlreleqdmivhrevypvvpPkveysltphgeslmpileamyewgkgymelidi >7c0g_B:lambda_repressor-like_DNA-binding_domains; title=ACA1 IN COMPLEX WITH 14BP PALINDROMIC DNA TARGET organism=PSEUDOMONAS PHAGE JBD30 DNA sequence DG(D1):DC(C14) DG(D2):DC(C13) DC(D3):DG(C12) DA(D4):DT(C11) DC(D5):DG(C10) DA(D6):DT(C9) DC(D7):DG(C8) DG(D8):DC(C7) DT(D9):DA(C6) DG(D10):DC(C5) DT(D11):DA(C4) DG(D12):DC(C3) DC(D13):DG(C2) DC(D14):DG(C1) chainB ( 38) ARG44 0 0 0 0 0 0 0 0 0 0 0 6 16 25 ( 39) VAL45 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 41) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 19 ( 42) TYR48 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 53) ARG59 0 0 0 0 0 0 0 0 19 14 5 0 0 0 prot.sequence ktpdasnhdpdprylrgllkkagisqrraaellglSdRVmRYylsedikegyRpapytvqfaleclandpp >7c0j_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF CHIMERIC MUTANT OF GH5 IN COMPLEX WITH Z-DNA organism=GALLUS GALLUS, HOMO SAPIENS DNA sequence DC(E1):DG(D6) DG(E2):DC(D5) DC(E3):DG(D4) DG(E4):DC(D3) DC(E5):DG(D2) DG(E6):DC(D1) chainA ( 39) TYR1177 0 0 17 0 0 0 ( 52) VAL88 0 0 0 0 2 0 prot.sequence ptysemiaaairagssrqsiqayikshyhnkkeinrvlYsllaagvlkqtgVpgswala >7c17_ACDFGH:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=THE CRYO-EM STRUCTURE OF E. COLI CUER TRANSCRIPTION ACTIVATION COMPLEX WITH FULLY DUPLEX PROMOTER DNA organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(131):DT(259) DT(132):DA(258) DT(133):DA(257) DA(134):DT(256) DA(135):DT(255) DT(136):DA(254) DT(137):DA(253) DT(138):DA(252) DC(139):DG(251) DT(140):DA(250) DT(141):DA(249) DG(142):DC(248) DA(143):DT(247) DC(144):DG(246) DC(145):DG(245) DT(146):DA(244) DT(147):DA(243) DC(148):DG(242) DC(149):DG(241) DC(150):DG(240) DC(151):DG(239) DT(152):DA(238) DT(153):DA(237) DG(154):DC(236) DC(155):DG(235) DT(156):DA(234) DG(157):DC(233) DG(158):DC(232) DA(159):DT(231) DA(160):DT(230) DG(161):DC(229) DG(162):DC(228) DT(163):DA(227) DT(164):DA(226) DT(165):DA(225) DA(166):DC(212) DT(167):DA(211) DA(168):DG(210) DA(169):DT(29) DT(170):DG(28) DG(171):DC(27) DG(172):DC(26) DG(173):DT(25) DA(174):DA(24) DG(175):DC(23) DC(176):DG(22) chainA chainC (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (199) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 5 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (479) LEU481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainD (196) THR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (298) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 0 (774) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (775) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 chainF ( 4) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 6) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 ( 7) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 1 0 ( 10) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 ( 13) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 18) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 19) LEU111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 24) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (236) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (238) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 (239) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (241) ILE388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (254) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 (273) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (276) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (278) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (281) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (282) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 (283) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 (285) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 (286) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0 4 0 0 0 0 0 0 0 (287) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 0 0 (289) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 3 0 0 0 0 0 0 0 (290) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 6 0 0 0 0 0 0 0 0 0 0 0 (293) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (294) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (437) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 3 17 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) GLU585 0 0 0 0 0 0 0 0 0 0 3 14 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) ARG586 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) ARG588 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) GLN589 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 14) SER14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) PHE19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TYR36 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence teflkprlvdieqvssthakvtleplergfghtlgnalrrillssmpgcavteveidgvlheystkegvqedileillnlkglavrvqgkdeviltlnksgigpvtaadithdgdveivkpqhvichltdenasismrikvqrgrgyvpastrihseederpigrllvdacyspveriaynveaarveqrtdldklviemetngtidpeeairraatilaeqleafvdlrdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp/ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlsLgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginiele/fdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/rttDpVRmyMreMgtveLLtregEidiakriedginqvqcsvaeypeaitylleqydrveaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvIsiakkytnrglqFldliqegniglmkavdkfEyrRgYkfSTYaTWWiRQaiTRsiadqartiripvHmiEtinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtRERiRQieakalrklrhpsrsevlrsfld/mnisdvakitgltsKaiRFyeekglvtppmrsengYrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalanacpgddsadcpiienls/mnisdvakitgltSKaiRFyeekglvtppmrsengYrtytqqhlneltllrqarqvgfnleesgelvnlfndpqrhsadvkrrtlekvaeierhieelqsmrdqllalanacpgddsadcpiienlsg >7c4p_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF DBD PLASMA TREATED ZEBRAFISH TRF2 MYB-DOMAIN COMPLEXED WITH DNA organism=? DNA sequence DT(E1):DA(F12) DT(E2):DA(F11) DA(E3):DT(F10) DG(E4):DC(F9) DG(E5):DC(F8) DG(E6):DC(F7) DT(E7):DA(F6) DT(E8):DA(F5) DA(E9):DT(F4) DG(E10):DC(F3) chainB ( 2) ARG522 0 0 0 0 0 0 9 8 5 0 ( 40) VAL560 0 2 1 0 0 0 0 0 0 0 ( 43) LYS563 0 0 8 9 2 0 0 0 0 0 ( 44) ASP564 0 0 0 0 6 13 0 0 0 0 ( 47) ARG567 0 0 0 5 12 4 0 0 0 0 ( 48) THR568 0 0 0 0 0 0 1 0 0 0 prot.sequence tRkmwsvqesewlkqgvvrygvghwerirsafpfagrtaVnlKDrwRTmvklkmv >7c4q_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF DBD PLASMA TREATED ZEBRAFISH TRF2 MYB-DOMAIN COMPLEXED WITH DNA organism=? DNA sequence DC(F3):DG(E10) DT(F4):DA(E9) DA(F5):DT(E8) DA(F6):DT(E7) DC(F7):DG(E6) DC(F8):DG(E5) DC(F9):DG(E4) DT(F10):DA(E3) DA(F11):DT(E2) DA(F12):DT(E1) chainB ( 2) ARG522 0 4 7 9 0 0 0 0 0 0 ( 40) VAL560 0 0 0 0 0 0 1 1 1 0 ( 43) LYS563 0 0 0 0 0 2 8 10 0 0 ( 44) ASP564 0 0 0 0 13 8 0 0 0 0 ( 47) ARG567 0 0 0 0 4 12 5 0 0 0 prot.sequence tRkmwsvqesewlkqgvvrygvghwerirsafpfagrtaVnlKDrwRtmvklkmv >7c4r_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF HYDROGEN PEROXIDE TREATED ZEBRAFISH TRF2 COMPLEXED WITH DNA organism=Danio rerio DNA sequence DT(C1):DA(D12) DT(C2):DA(D11) DA(C3):DT(D10) DG(C4):DC(D9) DG(C5):DC(D8) DG(C6):DC(D7) DT(C7):DA(D6) DT(C8):DA(D5) DA(C9):DT(D4) DG(C10):DC(D3) DG(C11):DC(D2) DG(C12):DC(D1) chainA ( 2) ARG522 0 0 0 0 0 0 1 7 9 3 0 0 ( 40) VAL560 0 1 0 1 0 0 0 0 0 0 0 0 ( 43) LYS563 0 0 8 9 2 0 0 0 0 0 0 0 ( 44) ASP564 0 0 0 0 8 13 0 0 0 0 0 0 ( 47) ARG567 0 0 0 5 14 4 0 0 0 0 0 0 ( 48) THR568 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence tRkmwsvqesewlkqgvvrygvghwerirsafpfagrtaVnlKDrwRTmvklkm >7c7l_AB: title=CRYO-EM STRUCTURE OF THE CAS12F1-SGRNA-TARGET DNA COMPLEX organism=uncultured archaeon DNA sequence DC(D21):DG(E6) DA(D22):DT(E5) DA(D23):DT(E4) DA(D24):DT(E3) DT(D25):DA(E2) DT(D26):DA(E1) DA(D27):DT(E0) chainA (129) SER142 10 10 0 0 0 0 0 (133) TYR146 0 7 11 0 0 0 0 (143) ALA156 0 0 1 3 0 0 0 (147) SER160 1 0 1 0 0 0 0 (150) ARG163 18 0 0 0 0 0 0 (151) SER164 1 0 0 0 0 0 0 (184) GLN197 0 10 12 2 0 0 0 (189) TYR202 0 0 1 7 4 0 0 (231) GLN244 0 0 0 0 1 1 0 chainB prot.sequence kntitktlklrivrpynsaevekivadeknnrekialkeacskhlkvttqvernaclfckarklddkfyqklrgqfpdavfwqeiseifrqlqkqaaeiynqslielyyeifikgkgianassvehylSdvcYtraaelfknAaiaSglRSkiksnfrlkelknmksglpttksdnfpiplvkQkggqYtgfeisnhnsdfiikipfgrwqvkkeidkyrpwekfdfeqvQkspkpislllstqrrkrnkgwskdegteaeikkvmngdyqtsyievkrgskigeksawmlnlsidvpkidkgvdpsiiggiavgvksplvcainnafsrysisdndlfhfnkkmfarrrillkknrhkraghgaknklkpitiltekserfrkklierwaceiadffiknkvgtvqmenlesmkrkedsyfnirlwpyaemqnkiefklkqygieirkvapnntsktcskcghlnnyfnfeyrkknkfphfkcekcnadynaalnisnpklk/titktlklrivrpfwqeiseifrqlqkqaaeiynqslielyyeifikgkgianassvehylsdvcytraaelfknaaiasglrskiksnfrlkelknmksglpttksdnfpiplvfeisnfiikipfgRwqvKkeidkyrpwEkfdFeqVQkspkpislllsyievkrgssawmlnlsidvpdPsiigGiavgvksplvcainnafsrysisdndlfhfnkkmfarrrilLkkpitiltekserfrkklierwaceiadffiknkvgtvqmenlesmkrkedsyfnirlrgfwpyaemqnkiefklkqygieirkvapnntsktcskcghlnnyfnfeyrkknkfphfkcekcnfkenadynaalnisnpkl >7c97_CDFK:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI RNAP-PROMOTER OPEN COMPLEX (RPO) WITH SSPA organism=ESCHERICHIA COLI / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(H4):DT(G60) DG(H58):DT(G59) DA(H6):DT(G57) DA(H8):DA(H7) DA(H9):DT(G54) DT(H10):DA(G53) DG(H11):DC(G52) DA(H12):DT(G51) DT(H13):DA(G50) DT(H14):DA(G49) DG(H15):DC(G48) DA(H16):DT(G47) DC(H17):DG(G46) DA(H18):DT(G45) DA(H19):DT(G44) DA(H20):DT(G43) DA(H21):DT(G42) DG(H22):DC(G41) DT(H23):DA(G40) DG(H24):DC(G39) DT(H26):DA(G38) DA(H27):DT(G36) DA(H28):DT(G35) DA(H29):DT(G34) DT(H30):DA(G33) DT(H31):DA(G32) DG(H32):DC(G31) DT(H33):DA(G30) DC(H35):DG(G28) DT(H36):DA(G27) DA(H37):DT(G26) DT(H38):DA(G13) DA(H39):DG(G12) DA(H40):DT(G11) DT(H41):DG(G10) DG(H42):DC(G9) DG(H43):DC(G8) DG(H44):DA(H7) DA(H45):DA(G6) DG(H46):DC(G5) DC(H47):DG(G4) DT(H48):DT(G3) DG(H49):DC(G2) DT(H50):DC(G1) DC(H51):DC(G0) chainK chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 (180) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 2 0 0 0 (365) TYR367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 (443) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (536) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (544) GLU546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (545) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 chainD chainF ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 0 ( 16) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 27) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (243) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 (245) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 (246) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (254) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 (289) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 (290) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 (293) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) GLU585 0 0 0 0 0 0 0 0 0 1 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgSWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiYrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmvqnnplseithkrrisalgpggLtreRagfEVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/teefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqiltEeqyldaleefgdefdakmgaeaiqallksmDLeqeceqlreelnetnSetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfIygkLelRglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynAdfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvrIteyEkdaNGelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmaaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/eigrttdpVRmyMreMgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvddpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkYtnRglqfldliqegniglmkavdkfEyrRgYkfSTYaTWWiRQaiTRsiadqartiripVHmietinklnRisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtrEriRqieakalrklrhpsrsevlrsfld/dpillrpvDDleLtvRsancLkaeaiHyigdlvqrtevelkslteikdvlasrglslgmrlenwppa >7c98_A:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=HUMAN DMC1 POST-SYNAPTIC COMPLEXES organism=HOMO SAPIENS DNA sequence DT(D1):DA(E9) DT(D2):DA(E8) DT(D3):DA(E7) DT(D4):DA(E6) DT(D5):DA(E5) DT(D6):DA(E4) DT(D7):DA(E3) DT(D8):DA(E2) DT(D9):DA(E1) chainA (215) ARG236 23 0 0 0 0 0 0 0 0 (218) LEU239 2 0 0 0 0 0 0 0 0 (252) ASP273 0 0 2 0 0 0 0 0 0 (253) PRO274 0 0 11 13 0 0 0 0 0 prot.sequence qdidllqkhginvadikklksvgictikgiqmttrralcnvkglseakvdkikeaankliepgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvtaqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmelldyvaakfheeagifklliidsimalfrvdfsgRgeLaerqqklaqmlsrlqkiseeynvavfvtnqmtaDPgapkkpigghilahasttrislrkgrgelriakiydspempeneatfaitaggigd >7c98_ABC:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=HUMAN DMC1 POST-SYNAPTIC COMPLEXES organism=HOMO SAPIENS DNA sequence DA(E1):DT(D9) DA(E2):DT(D8) DA(E3):DT(D7) DA(E4):DT(D6) DA(E5):DT(D5) DA(E6):DT(D4) DA(E7):DT(D3) DA(E8):DT(D2) DA(E9):DT(D1) chainA (215) ARG236 0 0 0 0 0 0 0 0 23 (218) LEU239 0 0 0 0 0 0 0 0 2 (252) ASP273 0 0 0 0 0 0 2 0 0 (253) PRO274 0 0 0 0 0 13 11 0 0 chainB (215) ARG236 0 0 0 0 0 24 17 0 0 (218) LEU239 0 0 0 0 0 2 4 0 0 (219) ALA240 0 0 0 0 0 0 3 1 0 (251) ALA272 0 0 1 0 0 0 0 0 0 (253) PRO274 0 0 10 12 0 0 0 0 0 (258) LYS286 0 0 0 0 1 0 0 0 0 chainC (215) ARG236 0 0 22 20 0 0 0 0 0 (218) LEU239 0 0 3 4 0 0 0 0 0 (219) ALA240 0 0 0 3 1 0 0 0 0 (253) PRO274 10 0 0 0 0 0 0 0 0 (258) LYS286 0 1 0 0 0 0 0 0 0 prot.sequence qdidllqkhginvadikklksvgictikgiqmttrralcnvkglseakvdkikeaankliepgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvtaqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmelldyvaakfheeagifklliidsimalfrvdfsgRgeLaerqqklaqmlsrlqkiseeynvavfvtnqmtaDPgapkkpigghilahasttrislrkgrgelriakiydspempeneatfaitaggigd/qdidllqkhginvadikklksvgictikgiqmttrralcnvkglseakvdkikeaankliepgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvtaqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmelldyvaakfheeagifklliidsimalfrvdfsgRgeLAerqqklaqmlsrlqkiseeynvavfvtnqmtAdPgapkKpigghilahasttrislrkgrgelriakiydspempeneatfaitaggigd/qdidllqkhginvadikklksvgictikgiqmttrralcnvkglseakvdkikeaankliepgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvtaqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmelldyvaakfheeagifklliidsimalfrvdfsgRgeLAerqqklaqmlsrlqkiseeynvavfvtnqmtadPgapkKpigghilahasttrislrkgrgelriakiydspempeneatfaitaggigd >7c99_ABC:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=HUMAN DMC1 POST-SYNAPTIC COMPLEXES WITH MISMATCHED DSDNA organism=HOMO SAPIENS DNA sequence DA(E1):DT(D9) DA(E2):DT(D8) DA(E3):DT(D7) DA(E4):DT(D6) DA(E5):DT(D5) DA(E6):DT(D4) DA(E7):DT(D3) DA(E8):DT(D2) DA(E9):DT(D1) chainA (215) ARG236 0 0 0 0 0 0 0 0 29 (218) LEU239 0 0 0 0 0 0 0 0 2 (250) THR271 0 0 0 0 0 0 1 0 0 (251) ALA272 0 0 0 0 0 1 0 0 0 (253) PRO274 0 0 0 0 0 9 13 0 0 chainB (215) ARG236 0 0 0 0 0 30 11 0 0 (218) LEU239 0 0 0 0 0 3 4 0 0 (219) ALA240 0 0 0 0 0 0 2 1 0 (250) THR271 0 0 0 1 0 0 0 0 0 (251) ALA272 0 0 1 0 0 0 0 0 0 (253) PRO274 0 0 10 13 0 0 0 0 0 chainC (215) ARG236 0 0 37 13 0 0 0 0 0 (218) LEU239 0 0 4 4 0 0 0 0 0 (219) ALA240 0 0 0 2 2 0 0 0 0 (223) GLN244 0 0 0 0 1 0 0 0 0 (250) THR271 1 0 0 0 0 0 0 0 0 (253) PRO274 11 0 0 0 0 0 0 0 0 prot.sequence qdidllqkhginvadikklksvgictikgiqmttrralcnvkglseakvdkikeaankliepgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvtaqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmelldyvaakfheeagifklliidsimalfrvdfsgRgeLaerqqklaqmlsrlqkiseeynvavfvtnqmTAdPgapkkpigghilahasttrislrkgrgelriakiydspempeneatfaitaggigd/qdidllqkhginvadikklksvgictikgiqmttrralcnvkglseakvdkikeaankliepgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvtaqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmelldyvaakfheeagifklliidsimalfrvdfsgRgeLAerqqklaqmlsrlqkiseeynvavfvtnqmTAdPgapkkpigghilahasttrislrkgrgelriakiydspempeneatfaitaggigd/qdidllqkhginvadikklksvgictikgiqmttrralcnvkglseakvdkikeaankliepgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvtaqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmelldyvaakfheeagifklliidsimalfrvdfsgRgeLAerqQklaqmlsrlqkiseeynvavfvtnqmTadPgapkkpigghilahasttrislrkgrgelriakiydspempeneatfaitaggigd >7c99_B:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=HUMAN DMC1 POST-SYNAPTIC COMPLEXES WITH MISMATCHED DSDNA organism=HOMO SAPIENS DNA sequence DA(E1):DT(D9) DA(E2):DT(D8) DA(E3):DT(D7) DA(E4):DT(D6) DA(E5):DT(D5) DA(E6):DT(D4) DA(E7):DT(D3) DA(E8):DT(D2) DA(E9):DT(D1) chainB (215) ARG236 0 0 0 0 0 30 11 0 0 (218) LEU239 0 0 0 0 0 3 4 0 0 (219) ALA240 0 0 0 0 0 0 2 1 0 (250) THR271 0 0 0 1 0 0 0 0 0 (251) ALA272 0 0 1 0 0 0 0 0 0 (253) PRO274 0 0 10 13 0 0 0 0 0 prot.sequence qdidllqkhginvadikklksvgictikgiqmttrralcnvkglseakvdkikeaankliepgfltafeysekrkmvfhittgsqefdkllgggiesmaiteafgefrtgktqlshtlcvtaqlpgaggypggkiifidtentfrpdrlrdiadrfnvdhdavldnvlyaraytsehqmelldyvaakfheeagifklliidsimalfrvdfsgRgeLAerqqklaqmlsrlqkiseeynvavfvtnqmTAdPgapkkpigghilahasttrislrkgrgelriakiydspempeneatfaitaggigd >7c9a_ABC:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=HUMAN RAD51 POST-SYNAPTIC COMPLEXES MUTANT (V273P, D274G) organism=HOMO SAPIENS DNA sequence DT(D1):DA(E9) DT(D2):DA(E8) DT(D3):DA(E7) DT(D4):DA(E6) DT(D5):DA(E5) DT(D6):DA(E4) DT(D7):DA(E3) DT(D8):DA(E2) DT(D9):DA(E1) chainA (214) ARG235 22 0 0 0 0 0 0 0 0 (217) LEU238 3 0 0 0 0 0 0 0 0 (250) ALA271 0 0 0 2 0 0 0 0 0 (252) PRO273 0 0 15 10 0 0 0 0 0 chainB (214) ARG235 0 0 16 30 0 0 0 0 0 (217) LEU238 0 0 3 3 0 0 0 0 0 (218) SER239 0 4 3 0 0 0 0 0 0 (250) ALA271 0 0 0 0 0 0 3 0 0 (252) PRO273 0 0 0 0 0 13 13 0 0 chainC (214) ARG235 0 0 0 0 0 9 29 0 0 (217) LEU238 0 0 0 0 0 3 2 0 0 (218) SER239 0 0 0 0 4 3 0 0 0 (252) PRO273 0 0 0 0 0 0 0 0 15 prot.sequence pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLsarqmhlarflrmllrladefgvavvitnqvvAqPggaadpkkpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgd/pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvvAqPggaadpkkpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgd/pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvvaqPggaadpkkpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgd >7c9a_B:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=HUMAN RAD51 POST-SYNAPTIC COMPLEXES MUTANT (V273P, D274G) organism=HOMO SAPIENS DNA sequence DA(E1):DT(D9) DA(E2):DT(D8) DA(E3):DT(D7) DA(E4):DT(D6) DA(E5):DT(D5) DA(E6):DT(D4) DA(E7):DT(D3) DA(E8):DT(D2) DA(E9):DT(D1) chainB (214) ARG235 0 0 0 0 0 30 16 0 0 (217) LEU238 0 0 0 0 0 3 3 0 0 (218) SER239 0 0 0 0 0 0 3 4 0 (250) ALA271 0 0 3 0 0 0 0 0 0 (252) PRO273 0 0 13 13 0 0 0 0 0 prot.sequence pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvvAqPggaadpkkpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgd >7c9o_A: title=CRYSTAL STRUCTURE OF DNA-BOUND CCT/NF-YB/YC COMPLEX (HD1CCT/GHD8/OSNF- YC2) organism=ORYZA SATIVA JAPONICA GROUP DNA sequence DA(E3):DT(D25) DT(E4):DA(D24) DC(E5):DG(D23) DG(E6):DC(D22) DA(E7):DT(D21) DG(E8):DC(D20) DC(E9):DG(D19) DT(E10):DA(D18) DG(E11):DC(D17) DT(E12):DA(D16) DG(E13):DC(D15) DG(E14):DC(D14) DT(E15):DA(D13) DT(E16):DA(D12) DG(E17):DC(D11) DA(E18):DT(D10) DG(E19):DC(D9) DA(E20):DT(D8) DG(E21):DC(D7) DT(E22):DA(D6) DG(E23):DC(D5) DA(E24):DT(D4) DG(E25):DC(D3) chainA ( 29) ARG363 0 0 0 0 0 0 1 9 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA367 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG370 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG372 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG376 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 ( 43) PHE377 0 0 0 0 0 0 0 0 0 22 34 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smdrearvlryrekkkarkfektiryetRkayAeaRpRikgRFak >7c9o_ABC:Histone-fold; title=CRYSTAL STRUCTURE OF DNA-BOUND CCT/NF-YB/YC COMPLEX (HD1CCT/GHD8/OSNF- YC2) organism=ORYZA SATIVA JAPONICA GROUP DNA sequence DC(D3):DG(E25) DT(D4):DA(E24) DC(D5):DG(E23) DA(D6):DT(E22) DC(D7):DG(E21) DT(D8):DA(E20) DC(D9):DG(E19) DT(D10):DA(E18) DC(D11):DG(E17) DA(D12):DT(E16) DA(D13):DT(E15) DC(D14):DG(E14) DC(D15):DG(E13) DA(D16):DT(E12) DC(D17):DG(E11) DA(D18):DT(E10) DG(D19):DC(E9) DC(D20):DG(E8) DT(D21):DA(E7) DC(D22):DG(E6) DG(D23):DC(E5) DA(D24):DT(E4) DT(D25):DA(E3) chainA ( 29) ARG363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 9 1 0 0 0 0 0 0 ( 33) ALA367 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 36) ARG370 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 ( 38) ARG372 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 ( 42) ARG376 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 ( 43) PHE377 0 0 0 0 0 0 0 0 0 0 0 0 34 22 0 0 0 0 0 0 0 0 0 chainB chainC prot.sequence smdrearvlryrekkkarkfektiryetRkayAeaRpRikgRFak/qdrflpianvsrimkrslpanakiskeaKetvQecVsEfisFVtgeasdkcqrekrktingddllwamttlgfeayvgplksyln/hqlplarikkimkadedvrmisaeapvlFakaCelFiLeltIRswlhaeenkrrtlqrndvaaaiartdvfdflvdivpr >7cby_C:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF FOXG1 DNA BINDING DOMAIN BOUND TO DBE2 DNA SITE organism=Homo sapiens DNA sequence DT(A1):DA(B16) DC(A2):DG(B15) DT(A3):DA(B14) DT(A4):DA(B13) DG(A5):DC(B12) DT(A6):DA(B11) DT(A7):DA(B10) DT(A8):DA(B9) DA(A9):DT(B8) DC(A10):DG(B7) DA(A11):DT(B6) DT(A12):DA(B5) DT(A13):DA(B4) DT(A14):DA(B3) DT(A15):DA(B2) DG(A16):DC(B1) chainC ( 51) ASN227 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 ( 52) SER228 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 54) ARG230 0 0 0 8 6 1 0 0 0 0 0 0 0 0 0 0 ( 55) HIS231 0 0 0 0 0 0 7 10 13 0 0 0 0 0 0 0 ( 58) SER234 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 ( 59) LEU235 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 prot.sequence pkyekppfsynalimmairqspekrltlngiyefimknfpyyrenkqgwqNSiRHnlSLnkcfvkvprhyddpgkgnywmldpssddvfiggttgklrrr >7cc9_A: title=SULFUR BINDING DOMAIN OF SPRMCRA COMPLEXED WITH PHOSPHOROTHIOATED DNA organism=Streptomyces pristinaespiralis DNA sequence DG(D1):DC(E8) DG(D2):DC(E7) DC(D3):DG(E6) DG(D4):DC(E5) GS(D5):DC(E4) DC(D6):DG(E3) DC(D7):DG(E2) DC(D8):DG(E1) chainA ( 18) LYS20 0 5 2 0 0 0 0 0 ( 20) ALA22 0 0 0 1 0 0 0 0 ( 71) ARG73 0 0 0 0 0 2 0 0 ( 76) TYR78 0 0 0 0 5 2 0 0 (100) HIS102 0 0 20 15 13 0 0 0 (102) ASP104 0 0 0 0 0 8 7 0 (103) SER105 0 0 0 0 0 0 0 10 prot.sequence ltdtdrsedflrrvrglKaArtangprlyqpitllwavgrarrgeartlawadtdeaigallkrhgargeRprpdYpvlalhraglwtleghvgevptaHgDSalrnwfaeqrpvgglaepfhdllhrsghsrvsvieallttyfagldpvplledtglydeg >7ccd_A: title=SULFUR BINDING DOMAIN OF SPRMCRA COMPLEXED WITH PHOSPHOROTHIOATED DNA organism=Streptomyces pristinaespiralis DNA sequence DG(F1):DC(E10) DG(F2):DC(E9) DC(F3):DG(E8) DG(F4):DC(E7) AS(F5):DT(E6) DA(F6):DT(E5) DC(F7):DG(E4) DG(F8):DC(E3) DT(F9):DA(E2) DG(F10):DC(E1) chainA ( 19) LYS20 1 7 3 0 0 0 0 0 0 0 ( 21) ALA22 0 0 0 2 0 0 0 0 0 0 ( 72) ARG73 0 0 0 0 0 3 0 0 0 0 ( 77) TYR78 0 0 0 0 6 2 0 0 0 0 (101) HIS102 0 0 14 15 13 0 0 0 0 0 (103) ASP104 0 0 0 0 0 6 8 1 0 0 (104) SER105 0 0 0 0 0 0 0 4 0 0 prot.sequence pltdtdrsedflrrvrglKaArtangprlyqpitllwavgrarrgeartlawadtdeaigallkrhgargeRprpdYpvlalhraglwtleghvgevptaHgDSalrnwfaeqrpvgglaepfhdllhrsghsrvsvieallttyfagldpvplledtglydeghhhhh >7ccq_A:Histone-fold; title=STRUCTURE OF THE 1:1 CGAS-NUCLEOSOME COMPLEX organism=HOMO SAPIENS DNA sequence DC(J-73):DG(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainA ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RyrpgtvalreirryqkstelliRklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger >7ccq_ABCDEFGH:Histone-fold;PH_domain-like; title=STRUCTURE OF THE 1:1 CGAS-NUCLEOSOME COMPLEX organism=HOMO SAPIENS DNA sequence DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainA ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence RyrpgtvalreirryqkstelliRklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/DniqgitkpairrlarrggvkriSgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavll/srkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7ccr_A:Histone-fold; title=STRUCTURE OF THE 2:2 CGAS-NUCLEOSOME COMPLEX organism=? DNA sequence DC(J-73):DG(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-20):DG(I21) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J31):DA(I-30) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainA ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger >7ccr_ABCDEFGH:Histone-fold;PH_domain-like; title=STRUCTURE OF THE 2:2 CGAS-NUCLEOSOME COMPLEX organism=HOMO SAPIENS DNA sequence DC(J-73):DG(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-20):DG(I21) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J31):DA(I-30) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainA ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/DNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/srkesysiyvykvlkqvhpdtgisskAmgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavll/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7ccr_LMNOPQRS:Histone-fold;PH_domain-like; title=STRUCTURE OF THE 2:2 CGAS-NUCLEOSOME COMPLEX organism=HOMO SAPIENS DNA sequence DC(U-73):DG(T73) DT(U-72):DA(T72) DG(U-71):DC(T71) DG(U-70):DC(T70) DA(U-69):DT(T69) DG(U-68):DC(T68) DA(U-67):DT(T67) DA(U-66):DT(T66) DT(U-65):DA(T65) DC(U-64):DG(T64) DC(U-63):DG(T63) DC(U-62):DG(T62) DG(U-61):DC(T61) DG(U-60):DC(T60) DT(U-59):DA(T59) DG(U-58):DC(T58) DC(U-57):DG(T57) DC(U-56):DG(T56) DG(U-55):DC(T55) DA(U-54):DT(T54) DG(U-53):DC(T53) DG(U-52):DC(T52) DC(U-51):DG(T51) DC(U-50):DG(T50) DG(U-49):DC(T49) DC(U-48):DG(T48) DT(U-47):DA(T47) DC(U-46):DG(T46) DA(U-45):DT(T45) DA(U-44):DT(T44) DT(U-43):DA(T43) DT(U-42):DA(T42) DG(U-41):DC(T41) DG(U-40):DC(T40) DT(U-39):DA(T39) DC(U-38):DG(T38) DG(U-37):DC(T37) DT(U-36):DA(T36) DA(U-35):DT(T35) DG(U-34):DC(T34) DA(U-33):DT(T33) DC(U-32):DG(T32) DA(U-31):DT(T31) DG(U-30):DC(T30) DC(U-29):DG(T29) DT(U-28):DA(T28) DC(U-27):DG(T27) DT(U-26):DA(T26) DA(U-25):DT(T25) DG(U-24):DC(T24) DC(U-23):DG(T23) DA(U-22):DT(T22) DC(U-20):DG(T21) DG(U-19):DC(T19) DC(U-18):DG(T18) DT(U-17):DA(T17) DT(U-16):DA(T16) DA(U-15):DT(T15) DA(U-14):DT(T14) DA(U-13):DT(T13) DC(U-12):DG(T12) DG(U-11):DC(T11) DC(U-10):DG(T10) DA(U-9):DT(T9) DC(U-8):DG(T8) DG(U-7):DC(T7) DT(U-6):DA(T6) DA(U-5):DT(T5) DC(U-4):DG(T4) DG(U-3):DC(T3) DC(U-2):DG(T2) DG(U-1):DC(T1) DC(U0):DG(T0) DT(U1):DA(T-1) DG(U2):DC(T-2) DT(U3):DA(T-3) DC(U4):DG(T-4) DC(U5):DG(T-5) DC(U6):DG(T-6) DC(U7):DG(T-7) DC(U8):DG(T-8) DG(U9):DC(T-9) DC(U10):DG(T-10) DG(U11):DC(T-11) DT(U12):DA(T-12) DT(U13):DA(T-13) DT(U14):DA(T-14) DT(U15):DA(T-15) DA(U16):DT(T-16) DA(U17):DT(T-17) DC(U18):DG(T-18) DC(U19):DG(T-19) DG(U20):DC(T-20) DC(U21):DG(T-21) DC(U22):DG(T-22) DA(U23):DT(T-23) DA(U24):DT(T-24) DG(U25):DC(T-25) DG(U26):DC(T-26) DG(U27):DC(T-27) DG(U28):DC(T-28) DA(U29):DT(T-29) DT(U31):DA(T-30) DA(U32):DT(T-32) DC(U33):DG(T-33) DT(U34):DA(T-34) DC(U35):DG(T-35) DC(U36):DG(T-36) DC(U37):DG(T-37) DT(U38):DA(T-38) DA(U39):DT(T-39) DG(U40):DC(T-40) DT(U41):DA(T-41) DC(U42):DG(T-42) DT(U43):DA(T-43) DC(U44):DG(T-44) DC(U45):DG(T-45) DA(U46):DT(T-46) DG(U47):DC(T-47) DG(U48):DC(T-48) DC(U49):DG(T-49) DA(U50):DT(T-50) DC(U51):DG(T-51) DG(U52):DC(T-52) DT(U53):DA(T-53) DG(U54):DC(T-54) DT(U55):DA(T-55) DC(U56):DG(T-56) DA(U57):DT(T-57) DG(U58):DC(T-58) DA(U59):DT(T-59) DT(U60):DA(T-60) DA(U61):DT(T-61) DT(U62):DA(T-62) DA(U63):DT(T-63) DT(U64):DA(T-64) DA(U65):DT(T-65) DC(U66):DG(T-66) DA(U67):DT(T-67) DT(U68):DA(T-68) DC(U69):DG(T-69) DC(U70):DG(T-70) DT(U71):DA(T-71) DG(U72):DC(T-72) DT(U73):DA(T-73) chainL ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM chainN ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO chainP ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainS ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/DNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/srkesysiyvykvlkqvhpdtgisskAmgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavll/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7ce1_CD:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=COMPLEX STRUCTURE OF TRANSCRIPTION FACTOR SGHR WITH ITS COGNATE DNA organism=AGROBACTERIUM TUMEFACIENS A6 DNA sequence DT(d3):DA(c18) DC(d4):DG(c17) DT(d5):DA(c16) DG(d6):DC(c15) DC(d7):DG(c14) DA(d8):DT(c13) DA(d9):DT(c12) DC(d10):DG(c11) DG(d11):DC(c10) DT(d12):DA(c9) DT(d13):DA(c8) DG(d14):DC(c7) DC(d15):DG(c6) DA(d16):DT(c5) DG(d17):DC(c4) DA(d18):DT(c3) chainC ( 5) LEU22 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 16) ILE33 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 17) THR34 0 0 9 10 2 1 0 0 0 0 0 0 0 0 0 0 ( 18) THR35 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER37 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 28) ASP45 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ILE46 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) LEU72 0 0 0 0 0 0 0 14 5 0 0 0 0 0 0 0 ( 56) ARG73 0 0 0 0 5 10 10 3 0 0 0 0 0 0 0 0 chainD ( 5) LEU22 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 16) ILE33 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 17) THR34 0 0 0 0 0 0 0 0 0 0 0 4 11 8 0 0 ( 18) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 20) SER37 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 28) ASP45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 ( 29) ILE46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 55) LEU72 0 0 0 0 0 0 0 8 16 0 0 0 0 0 0 0 ( 56) ARG73 0 0 0 0 0 0 0 0 4 13 10 4 0 0 0 0 prot.sequence erptLktiaymtglgITTvSralkdapDIgaetkervrliaqqigyqpnragvrLRtgktnvialvlsvdeelmgftsqmvfgitevlattqyhlvvtphthakdsmvpiryiletgsadgviiskiepndprvrfmterkmpfvthgrsdmgiehayhdfdneayayeaverlaqcgrkriaiivppsrfafhdharkgftrgirdfgvsefpldaitietpldkirdfgkrlmqsddrpdgivsisgsstialvagfeaagvrigkdidivskqsaeflnwiqpqihtvnediklagrelakallaringappetlqsvsrpvwssmapk/erptLktiaymtglgITTvSralkdapDIgaetkervrliaqqigyqpnragvrLRtgktnvialvlsvdeelmgftsqmvfgitevlattqyhlvvtphthakdsmvpiryiletgsadgviiskiepndprvrfmterkmpfvthgrsdmgiehayhdfdneayayeaverlaqcgrkriaiivppsrfafhdharkgftrgirdfgvsefpldaitietpldkirdfgkrlmqsddrpdgivsisgsstialvagfeaagvrigkdidivskqsaeflnwiqpqihtvnediklagrelakallaringappetlqsvsrpvws >7ce1_D:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=COMPLEX STRUCTURE OF TRANSCRIPTION FACTOR SGHR WITH ITS COGNATE DNA organism=AGROBACTERIUM TUMEFACIENS A6 DNA sequence DT(d3):DA(c18) DC(d4):DG(c17) DT(d5):DA(c16) DG(d6):DC(c15) DC(d7):DG(c14) DA(d8):DT(c13) DA(d9):DT(c12) DC(d10):DG(c11) DG(d11):DC(c10) DT(d12):DA(c9) DT(d13):DA(c8) DG(d14):DC(c7) DC(d15):DG(c6) DA(d16):DT(c5) DG(d17):DC(c4) DA(d18):DT(c3) chainD ( 5) LEU22 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 16) ILE33 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 17) THR34 0 0 0 0 0 0 0 0 0 0 0 4 11 8 0 0 ( 18) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 20) SER37 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 28) ASP45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 ( 29) ILE46 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 55) LEU72 0 0 0 0 0 0 0 8 16 0 0 0 0 0 0 0 ( 56) ARG73 0 0 0 0 0 0 0 0 4 13 10 4 0 0 0 0 prot.sequence erptLktiaymtglgITTvSralkdapDIgaetkervrliaqqigyqpnragvrLRtgktnvialvlsvdeelmgftsqmvfgitevlattqyhlvvtphthakdsmvpiryiletgsadgviiskiepndprvrfmterkmpfvthgrsdmgiehayhdfdneayayeaverlaqcgrkriaiivppsrfafhdharkgftrgirdfgvsefpldaitietpldkirdfgkrlmqsddrpdgivsisgsstialvagfeaagvrigkdidivskqsaeflnwiqpqihtvnediklagrelakallaringappetlqsvsrpvws >7ce1_OP:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=COMPLEX STRUCTURE OF TRANSCRIPTION FACTOR SGHR WITH ITS COGNATE DNA organism=AGROBACTERIUM TUMEFACIENS A6 DNA sequence DT(o3):DA(p18) DC(o4):DG(p17) DT(o5):DA(p16) DG(o6):DC(p15) DC(o7):DG(p14) DA(o8):DT(p13) DA(o9):DT(p12) DC(o10):DG(p11) DG(o11):DC(p10) DT(o12):DA(p9) DT(o13):DA(p8) DG(o14):DC(p7) DC(o15):DG(p6) DA(o16):DT(p5) DG(o17):DC(p4) DA(o18):DT(p3) chainO ( 5) LEU22 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 16) ILE33 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 17) THR34 0 0 0 0 0 0 0 0 0 0 1 4 10 8 0 0 ( 18) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 20) SER37 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 21) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 28) ASP45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 ( 55) LEU72 0 0 0 0 0 0 0 4 16 0 0 0 0 0 0 0 ( 56) ARG73 0 0 0 0 0 0 0 0 4 3 4 2 0 0 0 0 chainP ( 5) LEU22 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 17) THR34 0 0 7 10 2 2 0 0 0 0 0 0 0 0 0 0 ( 18) THR35 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) SER37 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 28) ASP45 8 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ILE46 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) LEU72 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 ( 56) ARG73 0 0 0 0 5 9 7 4 0 0 0 0 0 0 0 0 prot.sequence erptLktiaymtglgITTvSRalkdapDigaetkervrliaqqigyqpnragvrLRtgktnvialvlsvdeelmgftsqmvfgitevlattqyhlvvtphthakdsmvpiryiletgsadgviiskiepndprvrfmterkmpfvthgrsdmgiehayhdfdneayayeaverlaqcgrkriivppsrfafhdharkgftrgirdfgvsefpldaitietpldkirdfgkrlmqsddrpivsisgsstialvagfeaagvrigkdidskqsaeflnwiqpqihtvnediklagrelakallarinppetlqsvsrpvwss/erptLktiaymtglgiTTvSralkdapDIgaetkervrliaqqigyqpnragvrLRtgktnvialvlsvdeelmgftsqmvfgitevlattqyhlvvtphkdsmvpiryiletgsadgviiskiepndprvrfmterkmpfvthgrsdmgiehayhdfdneayayeaverlaqcgrkriaiivppsrfafhdharkgftrgirdfgvsefpldaitietpldkirdfgkrlmqsddrpdgivsisgsstialvagfeaagvrigkidivskqsaeflnwiqpqihtvnediklagrelakallaringappetlqsvsrpvwss >7ce1_ST:Periplasmic_binding_protein-like_I;lambda_repressor-like_DNA-binding_domains; title=COMPLEX STRUCTURE OF TRANSCRIPTION FACTOR SGHR WITH ITS COGNATE DNA organism=AGROBACTERIUM TUMEFACIENS A6 DNA sequence DG(s6):DC(t15) DC(s7):DG(t14) DA(s8):DT(t13) DA(s9):DT(t12) DC(s10):DG(t11) DG(s11):DC(t10) DT(s12):DA(t9) DT(s13):DA(t8) DG(s14):DC(t7) DC(s15):DG(t6) DA(s16):DT(t5) chainS ( 5) LEU22 0 0 0 0 0 0 0 1 0 0 0 ( 16) ILE33 0 0 0 0 0 0 0 2 0 0 0 ( 17) THR34 0 0 0 0 0 0 0 1 4 10 7 ( 18) THR35 0 0 0 0 0 0 0 0 0 0 5 ( 20) SER37 0 0 0 0 0 0 0 2 0 0 0 ( 29) ILE46 0 0 0 0 0 0 0 0 0 0 1 ( 55) LEU72 0 0 0 0 2 15 0 0 0 0 0 ( 56) ARG73 0 0 0 0 0 7 0 14 6 0 0 chainT ( 5) LEU22 0 0 1 0 0 0 0 0 0 0 0 ( 16) ILE33 0 0 2 0 0 0 0 0 0 0 0 ( 17) THR34 13 4 0 0 0 0 0 0 0 0 0 ( 20) SER37 0 0 2 0 0 0 0 0 0 0 0 ( 55) LEU72 0 0 0 0 12 3 0 0 0 0 0 ( 56) ARG73 0 2 9 4 5 0 0 0 0 0 0 prot.sequence erptLktiaymtglgITTvSralkdapdIgaetkervrliaqqigyqpnragvrLRtgktnvialvlsvdeelmgftsqmvfgitevlattqyhlvvtphthakdsmvpiryiletgsadgviiskiepndprvrfmterkmpfvthgrsdmgiehayhdfdneayayeivppsrfafhdharkgftrgirdfgvseftietpldkirdfsgsstialvagfeaagvrigkediklagrelakallaringappetlqs/erptLktiaymtglgITtvSralkdapdigaetkervrliaqqigyqpnragvrLRtgktnvialvlsvdeelmgftsqmvfgitevlattqyhlvvtphthakdsmvpiryiletgsadgviiskiepndprvrfmterkmpfvthgrsdmgiehayhddneayayeaverlaqcgrkvppsrfafhdharkgftrgirdfgvseftietpldkirdfgkrlmqsddrpdgsstialvagfeaagvrigeflnwiqpqihvnediklagrelakallaringappetlqsv >7chw_CDFK:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI RNAP-PROMOTER OPEN COMPLEX (RPO) organism=ESCHERICHIA COLI / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(H3):DT(G60) DA(H4):DT(G59) DC(H5):DG(G58) DA(H6):DT(G57) DA(H7):DT(G56) DA(H8):DT(G55) DA(H9):DT(G54) DT(H10):DA(G53) DG(H11):DC(G52) DA(H12):DT(G51) DT(H13):DA(G50) DT(H14):DA(G49) DG(H15):DC(G48) DA(H16):DT(G47) DC(H17):DG(G46) DA(H18):DT(G45) DA(H19):DT(G44) DA(H20):DT(G43) DA(H21):DT(G42) DG(H22):DC(G41) DT(H23):DA(G40) DG(H24):DC(G39) DT(H25):DA(G38) DT(H26):DA(G37) DA(H27):DT(G36) DA(H28):DT(G35) DA(H29):DT(G34) DT(H30):DA(G33) DT(H31):DA(G32) DG(H32):DC(G31) DT(H33):DA(G30) DG(H34):DC(G29) DC(H35):DG(G28) DT(H36):DA(G27) DA(H37):DT(G26) DT(H38):DA(G13) DA(H39):DG(G12) DA(H40):DT(G11) DT(H41):DG(G10) DG(H42):DC(G9) DG(H43):DC(G8) DG(H44):DT(G7) DA(H45):DA(G6) DG(H46):DC(G5) DC(H47):DG(G4) DT(H48):DT(G3) DG(H49):DC(G2) DT(H50):DC(G1) DC(H51):DC(G0) chainK ( 16) ARG265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) LYS298 0 0 0 0 5 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 (196) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 (197) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (364) TYR367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (368) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 9 0 0 0 0 0 0 (371) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 17 1 0 0 0 0 0 0 0 (372) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (442) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (448) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (535) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 (539) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 (544) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 chainD (198) THR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainF ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 4 0 0 0 0 0 0 0 ( 14) ARG103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 ( 27) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (245) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 (246) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (254) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 (289) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (290) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 (293) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (294) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (433) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) GLU574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ARG584 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) GLU585 0 0 0 0 0 0 0 0 0 0 0 9 16 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) GLN589 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvrDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiYrmmRpgEPptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmvqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/teefdikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqngkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmaaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/eigrttdpVRmyMRemgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvddpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlRLvisiakkYtnRglqfldliqegniglmkavdkFEyrRgYkfSTYaTWWirQaiTrsiadqartiripvHmietinklnRisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLEevgkqfdvtREriRQieakalrklrhpsrsevlrsfld/dpillrpvddleltvRsanclkaeaihyigdlvqrtevelKslteikdvlasrglslgmrlenwppa >7chw_K:C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI RNAP-PROMOTER OPEN COMPLEX (RPO) organism=? DNA sequence DC(G0):DC(H51) DC(G1):DT(H50) DC(G2):DG(H49) DT(G3):DT(H48) DG(G4):DC(H47) DC(G5):DG(H46) DA(G6):DA(H45) DT(G7):DG(H44) DC(G8):DG(H43) DC(G9):DG(H42) DG(G10):DT(H41) DT(G11):DA(H40) DG(G12):DA(H39) DA(G13):DT(H38) DT(G26):DA(H37) DA(G27):DT(H36) DG(G28):DC(H35) DC(G29):DG(H34) DA(G30):DT(H33) DC(G31):DG(H32) DA(G32):DT(H31) DA(G33):DT(H30) DT(G34):DA(H29) DT(G35):DA(H28) DT(G36):DA(H27) DA(G37):DT(H26) DA(G38):DT(H25) DC(G39):DG(H24) DA(G40):DT(H23) DC(G41):DG(H22) DT(G42):DA(H21) DT(G43):DA(H20) DT(G44):DA(H19) DT(G45):DA(H18) DG(G46):DC(H17) DT(G47):DA(H16) DC(G48):DG(H15) DA(G49):DT(H14) DA(G50):DT(H13) DT(G51):DA(H12) DC(G52):DG(H11) DA(G53):DT(H10) DT(G54):DA(H9) DT(G55):DA(H8) DT(G56):DA(H7) DT(G57):DA(H6) DG(G58):DC(H5) DT(G59):DA(H4) DT(G60):DA(H3) chainK ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 41) LYS298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 5 0 0 0 0 prot.sequence dpillrpvddleltvRsanclkaeaihyigdlvqrtevelKslteikdvlasrglslgmrlenwppa >7ckq_CDFGI:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=THE CRYO-EM STRUCTURE OF B. SUBTILIS BMRR TRANSCRIPTION ACTIVATION COMPLEX organism=BACILLUS SUBTILIS (STRAIN 168) / BACILLUS SUBTILIS (STRAIN 168) / BACILLUS SUBTILIS (STRAIN 168) / BACILLUS SUBTILIS (STRAIN 168) / BACILLUS SUBTILIS (STRAIN 168) / BACILLUS SUBTILIS (STRAIN 168) / BACILLUS SUBTILIS (STRAIN 168) / BACILLUS SUBTILIS (STRAIN 168) / BACILLUS SUBTILIS (STRAIN 168) / BACILLUS SUBTILIS (STRAIN 168) DNA sequence DG(22):DG(175) DC(23):DA(174) DA(24):DG(173) DT(25):DG(172) DC(26):DG(171) DC(27):DT(170) DG(28):DA(169) DT(29):DA(168) DG(210):DT(167) DA(211):DA(166) DA(225):DT(165) DA(226):DT(164) DA(228):DT(162) DC(229):DG(161) DC(230):DG(160) DT(231):DA(159) DC(232):DG(158) DC(233):DG(157) DT(234):DA(156) DC(235):DG(155) DC(236):DG(154) DT(237):DA(153) DA(238):DT(152) DG(239):DC(151) DG(240):DC(150) DG(241):DC(149) DG(242):DC(148) DA(243):DT(147) DG(244):DC(146) DA(245):DT(145) DG(246):DC(144) DT(247):DA(143) DC(248):DG(142) DA(249):DT(141) DA(250):DT(140) DC(251):DG(139) chainC (236) ARG241 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) GLU244 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) PRO245 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (353) ILE437 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (297) ARG303 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 3) VAL102 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LEU106 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) LEU115 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU120 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA141 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG144 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) LEU145 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ILE149 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) PHE178 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG181 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) LYS185 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) PHE186 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) THR188 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) TYR189 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) THR191 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) TRP192 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) TRP193 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG195 0 0 0 0 0 0 4 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) GLN196 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) THR199 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) HIS214 0 0 0 0 0 0 0 0 0 0 0 0 2 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) GLU333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (245) GLU344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 18 0 0 (246) ARG345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (248) ARG347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (249) GLN348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 1 chainG ( 19) LYS20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) TYR24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI ( 19) LYS20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 9 1 0 0 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 ( 23) TYR24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence vqygrhrqrrsyarisevlelpnlieiqtssyqwfldeglremfqdispiedftgnlslefidyslgepkypveeskerdvtysaplrvkvrlinketgevkdqdvfmgdfpimtdtgtfiingaervivsqlvrspsvyfsgkvdkngkkgftatvipnrgawleyetdakdvvyvridrtrklpvtvllralgfgsdqeildligeneylrntldkdntensdkalleiyerlRpgEPptvenakslldsrffdpkrydlanvgrykinkklhiknrlfnqyieeeiknitpadiissisyffnllhgvgdtddidhlgnrrlrsvgellqnqfriglsrmervvrermsIqdtntitpqqlinirpviasikeffgssqlsqfmdqtnplaelthkrrlsalgpggltreragmevrdvhyshygrmcpietpegpniglinslssyakvnrfgfietpyrrvdpetgkvtgridyltadeednyvvaqanarlddegafiddsivarfrgentvvsrnrvdymdvspkqvvsaatacipflenddsnralmganmqrqavplmqpeapfvgtgmeyvsgkdsgaavickhpgiverveaknvwvrryeevdgqkvkgnldkysllkfvrsnqgtcynqrpivsvgdevvkgeiladgpsmelgelalgrnvmvgfmtwdgynyedaiimserlvkddvytsihieeyeseardtklgpeeitrdipnvgedalrnlddrgiirigaevkdgdllvgkvtpkgvteltaeerllhaifgekarevrdtslrvphggggiihdvkvfnredgdelppgvnqlvrvyivqkrkisegdkmagrhgnkgviskilpeedmpylpdgtpidimlnplgvpsrmnigqvlelhmgmaarylgihiaspvfdgareedvwetleeagmsrdaktvlydgrtgepfdnrvsvgimymiklahmvddklharstgpyslvtqqplggkaqfggqrfgemevwaleaygaaytlqeiltvksddvvgrvktyeaivkgdnvpepgvpesfkvlikelqslgmdvkil/feymniglaspdkirswsfgevkkpetinyrtlkpekdglfcerifgptkdwechcgkykrvrykgvvcdrcgvevtrakvrrermghielaapvshiwyfkgipsrmglvldmspraleeviyfasyvvtdpantplekkqllsekeyrayldkygnkfqasmgaeaihkllqdidlvkevdmlkeelktsqgqrrtraikrlevleafrnsgnkpswmildvlpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlldlgapsiivqnekrmlqeavdalidngrrgRpvtgpgnrplkslshmlkgkqgrfrqnllgkrvdysgrsvivvgphlkmyqcglpkemalelfkpfvmkelvekglahniksakrkiervqpevwdvlesvikehpvllnraptlhrlgiqafeptlvegrairlhplvctaynadfdgdqmavhvplsaeaqaearilmlaaqnilnpkdgkpvvtpsqdmvlgnyyltleragavgegmvfkntdeallayqngyvhlhtrvavaanslqrskllittvgklvfneilpesfpymneptksnieedvkaviaqqpinapfkkgilgkiiaeifkrfhitetskmldrmknlgfkystkagitvgvsdivvlddkqeileeaqskvdnvmkqfrrgliteeeryervisiwsaakdviqgklmksldelnpiymmsdsgargnasnftqlagmrglmanpagriielpikssfregltvleyfisthgarkgladtalktadsgyltrrlvdvaqdviiretdcgtdrgilakplkegtetierleerligrfarkqvkhpetgevlvnenelidedkaleiveagieevwirsaftcntphgvckrcygrnlatgsdvevgeavgiiaaqsigepgtqltglpriqelfearnpatiteidgtvveinevrdkqqeivvqgavetrsytapynsrlkvaegdkitrgqvltegsidpkellkvtdlttvqeyllhevqkvyrmqgveigdkhvevmvrqmlrkvrvgdtdvlpgtlldihqfteankkvllegnrpatgrpvllgitkasletdsflsaasfqettrvltdaaikgkrdellglkenviigklvpagtgmmkyrkvkp/dpVrmyLkeigrvnlLsakeEiayaqkieegdeeskrrlaeAnlRLvvsIakryvgrgmlfldliqegnmglmkavekFdyRkgyKFsTYaTWWiRQaiTRaiadqartiripVHmvetinklirvqrqllqdlgreptpeeiaedmdltpekvreilkiaqepvsletpigeeddshlgdfiedqeatspsdhaayellkeqledvldtltdreenvlrlrfglddgrtrtlEevgkvfgvtrERiRQieakalrklrhpsrskrlkdfle/kesyysigevsklanvsiKalRYydkidlfkpayvdpdtsYRyytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaegigpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkiria/kesyysigevsklanvsiKalRYydkidlfkpayvdpdtsYRyytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaegigpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkiria >7ckq_G:Probable_bacterial_effector-binding_domain;Putative_DNA-binding_domain; title=THE CRYO-EM STRUCTURE OF B. SUBTILIS BMRR TRANSCRIPTION ACTIVATION COMPLEX organism=? DNA sequence DG(22):DG(175) DC(23):DA(174) DA(24):DG(173) DT(25):DG(172) DC(26):DG(171) DC(27):DT(170) DG(28):DA(169) DT(29):DA(168) DG(210):DT(167) DA(211):DA(166) DA(225):DT(165) DA(226):DT(164) DA(228):DT(162) DC(229):DG(161) DC(230):DG(160) DT(231):DA(159) DC(232):DG(158) DC(233):DG(157) DT(234):DA(156) DC(235):DG(155) DC(236):DG(154) DT(237):DA(153) DA(238):DT(152) DG(239):DC(151) DG(240):DC(150) DG(241):DC(149) DG(242):DC(148) DA(243):DT(147) DG(244):DC(146) DA(245):DT(145) DG(246):DC(144) DT(247):DA(143) DC(248):DG(142) DA(249):DT(141) DA(250):DT(140) DC(251):DG(139) chainG ( 19) LYS20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) TYR24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kesyysigevsklanvsiKalRYydkidlfkpayvdpdtsYRyytdsqlihldlikslkyigtpleemkkaqdlemeelfafyteqerqirekldflsaleqtislvkkrmkrqmeypalgevfvldeeeiriiqteaegigpenvlnasysklkkfiesadgftnnsygatfsfqpytsidemtyrhiftpvltnkqissitpdmeittipkgryaciaynfspehyflnlqklikyiadrqltvvsdvyeliipihyspkkqeeyrvemkiria >7cli_AB:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF NF-KB P52 HOMODIMER BOUND TO P-SELECTIN KB DNA FRAGMENT organism=Homo sapiens DNA sequence DC(C1):DG(D18) DA(C2):DT(D17) DA(C3):DT(D16) DG(C4):DC(D15) DG(C5):DC(D14) DG(C6):DC(D13) DG(C7):DC(D12) DT(C8):DA(D11) DC(C9):DG(D10) DA(C10):DT(D9) DC(C11):DG(D8) DC(C12):DG(D7) DC(C13):DG(D6) DC(C14):DG(D5) DC(C15):DG(D4) DT(C16):DA(D3) DT(C17):DA(D2) chainA ( 18) ARG52 0 0 0 0 0 0 0 0 0 0 1 12 7 0 0 0 0 ( 20) ARG54 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 ( 21) TYR55 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 23) CYS57 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 24) GLU58 0 0 0 0 0 0 0 0 0 0 5 5 1 0 0 0 0 ( 27) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 28) HIS62 0 0 0 0 0 0 0 0 0 0 0 0 5 12 1 0 0 (184) LYS221 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 chainB ( 19) ARG52 0 0 0 0 7 10 1 0 0 0 0 0 0 0 0 0 0 ( 21) ARG54 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) TYR55 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 ( 24) CYS57 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 25) GLU58 0 0 0 0 1 5 11 0 0 0 0 0 0 0 0 0 0 ( 28) SER61 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) HIS62 0 0 1 12 6 0 0 0 0 0 0 0 0 0 0 0 0 (188) LYS221 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 prot.sequence adgpylviveqpkqrgfRfRYgCEgpSHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsglteaeqreleqeakelkkvmdlsivrlrfsaflrasdgsfslplkpvisqpihdsKspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyyplv/tadgpylviveqpkqrgfRfRYgCEgpSHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrasdgsfslplkpvisqpihdsKspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyyplv >7cli_B:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF NF-KB P52 HOMODIMER BOUND TO P-SELECTIN KB DNA FRAGMENT organism=Homo sapiens DNA sequence DA(D2):DT(C17) DA(D3):DT(C16) DG(D4):DC(C15) DG(D5):DC(C14) DG(D6):DC(C13) DG(D7):DC(C12) DG(D8):DC(C11) DT(D9):DA(C10) DG(D10):DC(C9) DA(D11):DT(C8) DC(D12):DG(C7) DC(D13):DG(C6) DC(D14):DG(C5) DC(D15):DG(C4) DT(D16):DA(C3) DT(D17):DA(C2) DG(D18):DC(C1) chainB ( 19) ARG52 0 0 0 0 0 0 0 0 0 0 1 10 7 0 0 0 0 ( 21) ARG54 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 ( 22) TYR55 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 ( 24) CYS57 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 25) GLU58 0 0 0 0 0 0 0 0 0 0 11 5 1 0 0 0 0 ( 28) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 29) HIS62 0 0 0 0 0 0 0 0 0 0 0 0 6 12 1 0 0 (188) LYS221 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 prot.sequence tadgpylviveqpkqrgfRfRYgCEgpSHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrasdgsfslplkpvisqpihdsKspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyyplv >7cow_C:Histone-fold; title=353 BP DI-NUCLEOSOME HARBORING COHESIVE DNA TERMINI WITH LINKER HISTONE H1.0 organism=? DNA sequence DC(J1):DG(I349) DG(J2):DC(I348) DC(J3):DG(I347) DT(J4):DA(I346) DG(J5):DC(I345) DC(J6):DG(I344) DG(J7):DC(I343) DT(J8):DA(I342) DT(J9):DA(I341) DT(J10):DA(I340) DT(J11):DA(I339) DT(J12):DA(I338) DT(J13):DA(I337) DT(J14):DA(I336) DT(J15):DA(I335) DT(J16):DA(I334) DT(J17):DA(I333) DC(J18):DG(I332) DA(J19):DT(I331) DT(J20):DA(I330) DG(J21):DC(I329) DT(J22):DA(I328) DG(J23):DC(I327) DC(J24):DG(I326) DC(J25):DG(I325) DG(J26):DC(I324) DG(J27):DC(I323) DT(J28):DA(I322) DC(J29):DG(I321) DT(J30):DA(I320) DC(J31):DG(I319) DA(J32):DT(I318) DC(J33):DG(I317) DA(J34):DT(I316) DC(J35):DG(I315) DG(J36):DC(I314) DT(J37):DA(I313) DG(J38):DC(I312) DC(J39):DG(I311) DC(J40):DG(I310) DT(J41):DA(I309) DG(J42):DC(I308) DG(J43):DC(I307) DA(J44):DT(I306) DG(J45):DC(I305) DA(J46):DT(I304) DC(J47):DG(I303) DT(J48):DA(I302) DA(J49):DT(I301) DG(J50):DC(I300) DT(J51):DA(I299) DA(J52):DT(I298) DA(J53):DT(I297) DG(J54):DC(I296) DC(J55):DG(I295) DG(J56):DC(I294) DC(J57):DG(I293) DT(J58):DA(I292) DT(J59):DA(I291) DC(J60):DG(I290) DT(J61):DA(I289) DA(J62):DT(I288) DG(J63):DC(I287) DT(J64):DA(I286) DG(J65):DC(I285) DG(J66):DC(I284) DC(J67):DG(I283) DG(J68):DC(I282) DG(J69):DC(I281) DT(J70):DA(I280) DT(J71):DA(I279) DA(J72):DT(I278) DA(J73):DT(I277) DA(J74):DT(I276) DA(J75):DT(I275) DC(J76):DG(I274) DG(J77):DC(I273) DC(J78):DG(I272) DG(J79):DC(I271) DG(J80):DC(I270) DT(J81):DA(I269) DA(J82):DT(I268) DG(J83):DC(I267) DA(J84):DT(I266) DC(J85):DG(I265) DA(J86):DT(I264) DG(J87):DC(I263) DC(J88):DG(I262) DG(J89):DC(I261) DC(J90):DG(I260) DG(J91):DC(I259) DT(J92):DA(I258) DA(J93):DT(I257) DC(J94):DG(I256) DG(J95):DC(I255) DT(J96):DA(I254) DG(J97):DC(I253) DC(J98):DG(I252) DG(J99):DC(I251) DT(J100):DA(I250) DT(J101):DA(I249) DT(J102):DA(I248) DA(J103):DT(I247) DA(J104):DT(I246) DG(J105):DC(I245) DC(J106):DG(I244) DG(J107):DC(I243) DG(J108):DC(I242) DT(J109):DA(I241) DG(J110):DC(I240) DC(J111):DG(I239) DT(J112):DA(I238) DA(J113):DT(I237) DG(J114):DC(I236) DA(J115):DT(I235) DG(J116):DC(I234) DC(J117):DG(I233) DT(J118):DA(I232) DG(J119):DC(I231) DT(J120):DA(I230) DC(J121):DG(I229) DT(J122):DA(I228) DA(J123):DT(I227) DC(J124):DG(I226) DG(J125):DC(I225) DA(J126):DT(I224) DC(J127):DG(I223) DC(J128):DG(I222) DA(J129):DT(I221) DA(J130):DT(I220) DT(J131):DA(I219) DT(J132):DA(I218) DG(J133):DC(I217) DA(J134):DT(I216) DG(J135):DC(I215) DC(J136):DG(I214) DG(J137):DC(I213) DG(J138):DC(I212) DC(J139):DG(I211) DC(J140):DG(I210) DT(J141):DA(I209) DC(J142):DG(I208) DG(J143):DC(I207) DG(J144):DC(I206) DC(J145):DG(I205) DA(J146):DT(I204) DC(J147):DG(I203) DC(J148):DG(I202) DG(J149):DC(I201) DG(J150):DC(I200) DG(J151):DC(I199) DA(J152):DT(I198) DT(J153):DA(I197) DG(J154):DC(I196) DC(J155):DG(I195) DG(J156):DC(I194) DA(J157):DT(I193) DT(J158):DA(I192) DT(J159):DA(I191) DT(J160):DA(I190) DT(J161):DA(I189) DT(J162):DA(I188) DT(J163):DA(I187) DT(J164):DA(I186) DT(J165):DA(I185) DT(J166):DA(I184) DT(J167):DA(I183) DC(J168):DG(I182) DA(J169):DT(I181) DT(J170):DA(I180) DA(J171):DT(I179) DC(J172):DG(I178) DT(J173):DA(I177) DC(J174):DG(I176) DG(J175):DC(I175) DA(J176):DT(I174) DG(J177):DC(I173) DC(J178):DG(I172) DA(J179):DT(I171) DT(J180):DA(I170) DG(J181):DC(I169) DC(J182):DG(I168) DA(J183):DT(I167) DT(J184):DA(I166) DT(J185):DA(I165) DT(J186):DA(I164) DT(J187):DA(I163) DT(J188):DA(I162) DT(J189):DA(I161) DT(J190):DA(I160) DT(J191):DA(I159) DT(J192):DA(I158) DT(J193):DA(I157) DC(J194):DG(I156) DA(J195):DT(I155) DT(J196):DA(I154) DG(J197):DC(I153) DT(J198):DA(I152) DG(J199):DC(I151) DC(J200):DG(I150) DC(J201):DG(I149) DG(J202):DC(I148) DG(J203):DC(I147) DT(J204):DA(I146) DC(J205):DG(I145) DT(J206):DA(I144) DC(J207):DG(I143) DA(J208):DT(I142) DC(J209):DG(I141) DA(J210):DT(I140) DC(J211):DG(I139) DG(J212):DC(I138) DT(J213):DA(I137) DG(J214):DC(I136) DC(J215):DG(I135) DC(J216):DG(I134) DT(J217):DA(I133) DG(J218):DC(I132) DG(J219):DC(I131) DA(J220):DT(I130) DG(J221):DC(I129) DA(J222):DT(I128) DC(J223):DG(I127) DT(J224):DA(I126) DA(J225):DT(I125) DG(J226):DC(I124) DT(J227):DA(I123) DA(J228):DT(I122) DA(J229):DT(I121) DG(J230):DC(I120) DC(J231):DG(I119) DG(J232):DC(I118) DC(J233):DG(I117) DT(J234):DA(I116) DT(J235):DA(I115) DC(J236):DG(I114) DT(J237):DA(I113) DA(J238):DT(I112) DG(J239):DC(I111) DT(J240):DA(I110) DG(J241):DC(I109) DG(J242):DC(I108) DC(J243):DG(I107) DG(J244):DC(I106) DG(J245):DC(I105) DT(J246):DA(I104) DT(J247):DA(I103) DA(J248):DT(I102) DA(J249):DT(I101) DA(J250):DT(I100) DA(J251):DT(I99) DC(J252):DG(I98) DG(J253):DC(I97) DC(J254):DG(I96) DG(J255):DC(I95) DG(J256):DC(I94) DT(J257):DA(I93) DA(J258):DT(I92) DG(J259):DC(I91) DA(J260):DT(I90) DC(J261):DG(I89) DA(J262):DT(I88) DG(J263):DC(I87) DC(J264):DG(I86) DG(J265):DC(I85) DC(J266):DG(I84) DG(J267):DC(I83) DT(J268):DA(I82) DA(J269):DT(I81) DC(J270):DG(I80) DG(J271):DC(I79) DT(J272):DA(I78) DG(J273):DC(I77) DC(J274):DG(I76) DG(J275):DC(I75) DT(J276):DA(I74) DT(J277):DA(I73) DT(J278):DA(I72) DA(J279):DT(I71) DA(J280):DT(I70) DG(J281):DC(I69) DC(J282):DG(I68) DG(J283):DC(I67) DG(J284):DC(I66) DT(J285):DA(I65) DG(J286):DC(I64) DC(J287):DG(I63) DT(J288):DA(I62) DA(J289):DT(I61) DG(J290):DC(I60) DA(J291):DT(I59) DG(J292):DC(I58) DC(J293):DG(I57) DT(J294):DA(I56) DG(J295):DC(I55) DT(J296):DA(I54) DC(J297):DG(I53) DT(J298):DA(I52) DA(J299):DT(I51) DC(J300):DG(I50) DG(J301):DC(I49) DA(J302):DT(I48) DC(J303):DG(I47) DC(J304):DG(I46) DA(J305):DT(I45) DA(J306):DT(I44) DT(J307):DA(I43) DT(J308):DA(I42) DG(J309):DC(I41) DA(J310):DT(I40) DG(J311):DC(I39) DC(J312):DG(I38) DG(J313):DC(I37) DG(J314):DC(I36) DC(J315):DG(I35) DC(J316):DG(I34) DT(J317):DA(I33) DC(J318):DG(I32) DG(J319):DC(I31) DG(J320):DC(I30) DC(J321):DG(I29) DA(J322):DT(I28) DC(J323):DG(I27) DC(J324):DG(I26) DG(J325):DC(I25) DG(J326):DC(I24) DG(J327):DC(I23) DA(J328):DT(I22) DT(J329):DA(I21) DG(J330):DC(I20) DC(J331):DG(I19) DG(J332):DC(I18) DT(J333):DA(I17) DT(J334):DA(I16) DT(J335):DA(I15) DT(J336):DA(I14) DT(J337):DA(I13) DT(J338):DA(I12) DT(J339):DA(I11) DT(J340):DA(I10) DT(J341):DA(I9) DT(J342):DA(I8) DC(J343):DG(I7) DG(J344):DC(I6) DC(J345):DG(I5) DA(J346):DT(I4) DG(J347):DC(I3) DC(J348):DG(I2) DG(J349):DC(I1) chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk >7cpw_B:Nucleotidyltransferase; title=COMPLEX STRUCTURE OF DNA WITH SELF-CATALYZED DEPURINATION ACTIVITY organism=African swine fever virus DNA sequence DC(b1) DG(b2) DT(b3) DG(b4) DA(b5) DT(b6) DC(b7) DG(b8) DG(b9) DA(b10) DG(b11) DA(b12) DC(b13) DG(b14) DA(b15) DT(b16) DC(b17) DA(b18) DC(b19) DG(b20) chainB ( 86) LYS85 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) HIS115 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) VAL120 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ILE124 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ARG127 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gmltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgerKcvlfiewekktyqldlftalaeekpyaifHftgpVsylIriRaalkkknyklnqyglfknqtlvplkittekelikelgftyripkkrl >7cq4_A:GIY-YIG_endonuclease; title=CRYSTAL STRUCTURE OF SLX1-SLX4 IN COMPLEX WITH 5'FLAP DNA organism=SACCHAROMYCES CEREVISIAE (STRAIN YJM789) / SACCHAROMYCES CEREVISIAE (STRAIN YJM789) DNA sequence DG(K1):DC(L14) DG(K2):DC(L13) DA(K3):DT(L12) DC(K4):DG(L11) DA(K5):DT(L10) DT(K6):DA(L9) DC(K7):DG(L8) DT(K8):DA(L7) DT(K9):DA(L6) DT(K10):DA(L5) DG(K11):DC(L4) DC(K12):DG(L3) DC(K13):DG(L2) chainA ( 63) LYS75 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 71) HIS83 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qqhqfpdfyccfllqsinkrqsfyvgstpnpvrrlrqhngklakrdgsrpwemimivrgfpsKiaalqfeHawqhgyqthyiaekdrvvkhkaggrtlhhkvalmklllkheffqrmnlivevfnikawevwkqdkffierdrfpiniqinenaleepkektvdvlmdhsdenlkvveavytkvienernifetfekklttgvvrceicekeidytseeqnlkpfvalcnnkdcgcvnhlkclhryflddeqlivgrrnliprggkcpkcdmfcdwttlvkfstrmklahg >7cq4_B: title=CRYSTAL STRUCTURE OF SLX1-SLX4 IN COMPLEX WITH 5'FLAP DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(L15):DT(H14) DT(L16):DA(H13) DC(L17):DG(H12) DT(L18):DA(H11) DG(L19):DC(H10) DT(L20):DA(H9) DT(L21):DA(H8) DG(L22):DC(H7) DT(L23):DA(H6) DA(L24):DT(H5) DA(L25):DT(H4) DT(L26):DA(H3) DC(L27):DG(H2) chainB ( 25) ARG646 0 0 0 0 0 0 0 9 6 3 0 0 0 prot.sequence ceimmsqsmkelrqslktvglkpmRtkveiiqslqtasqilstannfskieifdhltelieafpdfleriytfepiplnelieklfsaepfvsqidemtirewadvqgiclrndk >7cr6_ABCDEF: title=SYNECHOCYSTIS CAS1-CAS2/PRESPACER BINARY COMPLEX organism=SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA) / SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA) / SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA) / SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA) / SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA) / SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA) / SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA) / SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA) / SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA) / SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA) / SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA) / SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA) DNA sequence DG(H8):DC(G29) DA(H9):DT(G28) DA(H10):DT(G27) DG(H12):DC(G25) DC(H13):DG(G24) DG(H14):DC(G23) DA(H15):DT(G22) DC(H16):DG(G21) DC(H17):DG(G20) DG(H18):DC(G19) DC(H20):DG(G17) DG(H22):DT(G16) DG(H23):DC(G13) DG(H25):DC(G12) DC(H26):DG(G11) DA(H27):DT(G10) DC(H28):DG(G9) DA(H29):DT(G8) chainA ( 54) GLU55 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 8) PRO9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ASP10 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLN26 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 9) ASP10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 11) VAL12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 47) SER51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainE ( 10) ALA11 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 12) LYS13 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 15) ASN16 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 18) ARG19 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 19) THR20 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 34) PHE35 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainF ( 18) ARG19 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 prot.sequence stlyltqpdavlskkheafhvalkqedgswkkqpipaqtledivllgypsitgEalgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhpifnykctyrraielqarllarhlqegvvyeplvir/stlyltqPDavlskkheafhvalkQedgswkkqpipaqtledivllgypsitgealgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhpifnykctyrraielqarllarhlqegvvyeplvi/mstlyltQPdavlskkheafhvalKqedgswkkqpipaqtledivllgypsitgealgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhpifnykctyrraielqarllarhlqegvvyeplvir/stlyltqpDaVlskkheafhvalkqswkkqpipaqtledivllgypSitgealgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdftfrltdsatktflgafdrklssefkhfnykctyrraielqarllarhlqegvvyeplvi/lyliiydvpAtKagNkrRTrlfdllsgygkwrqFsvfecflsvkqfaklqtameklikldedavciyvldentvqrtitygtpqpekpgsii/lyliiydvpatkagnkrRtrlfdllsgygkwrqfsvfecflsvkqfaklqtameklikldedavciyvldentvqrtitygtpqpekpgsii >7cr6_F:TTP0101/SSO1404-like; title=SYNECHOCYSTIS CAS1-CAS2/PRESPACER BINARY COMPLEX organism=? DNA sequence DG(H8):DC(G29) DA(H9):DT(G28) DA(H10):DT(G27) DG(H12):DC(G25) DC(H13):DG(G24) DG(H14):DC(G23) DA(H15):DT(G22) DC(H16):DG(G21) DC(H17):DG(G20) DG(H18):DC(G19) DC(H20):DG(G17) DG(H22):DT(G16) DG(H23):DC(G13) DG(H25):DC(G12) DC(H26):DG(G11) DA(H27):DT(G10) DC(H28):DG(G9) DA(H29):DT(G8) chainF ( 18) ARG19 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 prot.sequence lyliiydvpatkagnkrRtrlfdllsgygkwrqfsvfecflsvkqfaklqtameklikldedavciyvldentvqrtitygtpqpekpgsii >7cr8_AC: title=SYNECHOCYSTIS CAS1-CAS2-PRESPACERL COMPLEX organism=? DNA sequence DG(H9):DC(G28) DA(H10):DT(G27) DA(H11):DT(G26) DA(H12):DT(G25) DG(H13):DC(G24) DC(H14):DG(G23) DG(H15):DC(G22) DC(H17):DT(G21) DC(H18):DG(G19) DG(H19):DC(G18) DC(H20):DG(G17) DC(H21):DG(G16) DG(H23):DT(G15) DG(H24):DC(G13) DG(H25):DC(G12) DG(H26):DC(G11) DC(H27):DG(G10) DA(H28):DT(G9) DC(H29):DG(G8) DA(H30):DT(G7) chainA ( 54) GLU55 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 55) GLU55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence stlyltqpdavlskkheafhvalkqedgswkkqpipaqtledivllgypsitgEalgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhpifnykctyrraielqarllarhlqegvvyeplvir/mstlyltqpdavlskkheafhvalkqedgswkkqpipaqtledivllgypsitgEalgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhpifnykctyrraielqarllarhlqegvvyeplvir >7cr8_BDEF: title=SYNECHOCYSTIS CAS1-CAS2-PRESPACERL COMPLEX organism=? DNA sequence DT(G7):DA(H30) DG(G8):DC(H29) DT(G9):DA(H28) DG(G10):DC(H27) DC(G11):DG(H26) DC(G12):DG(H25) DC(G13):DG(H24) DT(G15):DG(H23) DG(G16):DC(H21) DG(G17):DC(H20) DC(G18):DG(H19) DG(G19):DC(H18) DT(G21):DC(H17) DC(G22):DG(H15) DG(G23):DC(H14) DC(G24):DG(H13) DT(G25):DA(H12) DT(G26):DA(H11) DT(G27):DA(H10) DC(G28):DG(H9) chainB ( 9) PRO9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 10) ASP10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 chainD ( 10) ASP10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) SER51 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 11) ALA11 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 20) THR20 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainF ( 19) ARG19 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mstlyltqPDavlskkheafhvalkqedgswkkqpipaqtledivllgypsitgealgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhpifnykctyrraielqarllarhlqegvvyeplvi/mstlyltqpDavlskkheafhvalkqedgswkkqpipaqtledivllgypSitgealgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhfnykctyrraielqarllarhlqegvvyeplvi/mlyliiydvpAtkagnkrRTrlfdllsgygkwrqfsvfecflsvkqfaklqtameklikldedavciyvldentvqrtitygtpqpekpgsii/mlyliiydvpatkagnkrRtrlfdllsgygkwrqfsvfecflsvkqfaklqtameklikldedavciyvldentvqrtitygtpqpekpgsii >7cr8_IJKLMN: title=SYNECHOCYSTIS CAS1-CAS2-PRESPACERL COMPLEX organism=? DNA sequence DT(O7):DA(P30) DG(O8):DC(P29) DT(O9):DA(P28) DG(O10):DC(P27) DC(O11):DG(P26) DC(O12):DG(P24) DC(O14):DG(P23) DG(O16):DC(P21) DG(O17):DC(P20) DC(O18):DG(P19) DG(O19):DC(P18) DG(O20):DC(P17) DT(O21):DA(P16) DC(O22):DG(P15) DG(O23):DC(P14) DC(O24):DG(P13) DT(O25):DA(P12) DT(O26):DA(P11) DT(O27):DA(P10) DC(O28):DG(P9) chainI ( 54) GLU55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 chainJ ( 9) PRO9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 10) ASP10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 chainK ( 55) GLU55 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 10) ASP10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 16) ASN16 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 20) THR20 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainN ( 19) ARG19 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stlyltqpdavlskkheafhvalkqedgswkkqpipaqtledivllgypsitgEalgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhpifnykctyrraielqarllarhlqegvvyeplvir/mstlyltqPDavlskkheafhvalkqedgswkkqpipaqtledivllgypsitgealgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhpifnykctyrraielqarllarhlqegvvyeplvi/mstlyltqpdavlskkheafhvalkqedgswkkqpipaqtledivllgypsitgEalgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhpifnykctyrraielqarllarhlqegvvyeplvir/mstlyltqpDavlskkheafhvalkqedgswkkqpipaqtledivllgypsitgealgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhfnykctyrraielqarllarhlqegvvyeplvi/mlyliiydvpatkagNkrRTrlfdllsgygkwrqfsvfecflsvkqfaklqtameklikldedavciyvldentvqrtitygtpqpekpgsii/mlyliiydvpatkagnkrRtrlfdllsgygkwrqfsvfecflsvkqfaklqtameklikldedavciyvldentvqrtitygtpqpekpgsii >7cr8_jlmn: title=SYNECHOCYSTIS CAS1-CAS2-PRESPACERL COMPLEX organism=? DNA sequence DT(o7):DA(p30) DG(o8):DC(p29) DT(o9):DA(p28) DG(o10):DC(p27) DC(o11):DG(p26) DC(o12):DG(p25) DC(o13):DG(p24) DC(o14):DG(p23) DG(o16):DC(p21) DG(o17):DC(p20) DC(o18):DG(p19) DG(o19):DC(p18) DG(o20):DC(p17) DT(o21):DA(p16) DC(o22):DG(p15) DG(o23):DC(p14) DC(o24):DG(p13) DT(o25):DA(p12) DT(o26):DA(p11) DT(o27):DA(p10) DC(o28):DG(p9) chainj ( 9) PRO9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 10) ASP10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 chainl ( 10) ASP10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) SER51 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainm ( 11) ALA11 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 16) ASN16 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 20) THR20 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 chainn ( 19) ARG19 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mstlyltqPDavlskkheafhvalkqedgswkkqpipaqtledivllgypsitgealgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhpifnykctyrraielqarllarhlqegvvyeplvi/mstlyltqpDavlskkheafhvalkqedgswkkqpipaqtledivllgypSitgealgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhfnykctyrraielqarllarhlqegvvyeplvi/mlyliiydvpAtkagNkrRTrlfdllsgygkwrqfsvfecflsvkqfaklqtameklikldedavciyvldentvqrtitygtpqpekpgsii/mlyliiydvpatkagnkrRtrlfdllsgygkwrqfsvfecflsvkqfaklqtameklikldedavciyvldentvqrtitygtpqpekpgsii >7cr8_r: title=SYNECHOCYSTIS CAS1-CAS2-PRESPACERL COMPLEX organism=? DNA sequence DG(x9):DC(w28) DA(x10):DT(w27) DA(x11):DT(w26) DA(x12):DT(w25) DG(x13):DC(w24) DC(x14):DG(w23) DG(x15):DC(w22) DC(x17):DT(w21) DC(x18):DG(w19) DG(x19):DC(w18) DC(x20):DG(w17) DC(x21):DG(w16) DG(x23):DT(w15) DG(x24):DC(w13) DG(x25):DC(w12) DG(x26):DC(w11) DC(x27):DG(w10) DA(x28):DT(w9) DC(x29):DG(w8) DA(x30):DT(w7) chainr ( 9) PRO9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ASP10 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mstlyltqPDavlskkheafhvalkqedgswkkqpipaqtledivllgypsitgealgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhpifnykctyrraielqarllarhlqegvvyeplvi >7cr8_rtuv: title=SYNECHOCYSTIS CAS1-CAS2-PRESPACERL COMPLEX organism=? DNA sequence DG(x9):DC(w28) DA(x10):DT(w27) DA(x11):DT(w26) DA(x12):DT(w25) DG(x13):DC(w24) DC(x14):DG(w23) DG(x15):DC(w22) DC(x17):DT(w21) DC(x18):DG(w19) DG(x19):DC(w18) DC(x20):DG(w17) DC(x21):DG(w16) DG(x23):DT(w15) DG(x24):DC(w13) DG(x25):DC(w12) DG(x26):DC(w11) DC(x27):DG(w10) DA(x28):DT(w9) DC(x29):DG(w8) DA(x30):DT(w7) chainr ( 9) PRO9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ASP10 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaint ( 10) ASP10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 ( 25) LYS25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 51) SER51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainu ( 19) ARG19 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR20 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainv ( 19) ARG19 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 prot.sequence mstlyltqPDavlskkheafhvalkqedgswkkqpipaqtledivllgypsitgealgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhpifnykctyrraielqarllarhlqegvvyeplvi/mstlyltqpDavlskkheafhvalKqedgswkkqpipaqtledivllgypSitgealgyalelglpvhyltqfgkyvgsalpsesrngqlrlaqfrahedpiqrldivkafvkgkvhnqynllyrrgqvdnplkgrgklvmrqqtleqvrgieglaareyfaswqemlghewtftgrfrrpptdpvnallsfgygllrtqvtaavhiagldpyigflhettrgqpamildlmeefralvadsvvltvlkqreiqrqdfteslgafrltdsatktflgafdrklssefkhfnykctyrraielqarllarhlqegvvyeplvi/mlyliiydvpatkagnkrRTrlfdllsgygkwrqfsvfecflsvkqfaklqtameklikldedavciyvldentvqrtitygtpqpekpgsii/mlyliiydvpatkagnkrRtrlfdllsgygkwrqfsvfecflsvkqfaklqtameklikldedavciyvldentvqrtitygtpqpekpgsii >7cro_BCDEFGHM:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NSD2 BEARING E1099K/T1150A DUAL MUTATION IN COMPLEX WITH 187-BP NCP organism=XENOPUS LAEVIS / XENOPUS TROPICALIS DNA sequence DG(A11):DC(K177) DC(A12):DG(K176) DC(A13):DG(K175) DC(A14):DG(K174) DG(A15):DC(K173) DA(A16):DT(K172) DT(A17):DA(K171) DC(A18):DG(K170) DC(A19):DG(K169) DC(A20):DG(K168) DC(A21):DG(K167) DT(A22):DA(K166) DG(A23):DC(K165) DG(A24):DC(K164) DA(A25):DT(K163) DG(A26):DC(K162) DA(A27):DT(K161) DA(A28):DT(K160) DT(A29):DA(K159) DC(A30):DG(K158) DC(A31):DG(K157) DC(A32):DG(K156) DG(A33):DC(K155) DG(A34):DC(K154) DT(A35):DA(K153) DG(A36):DC(K152) DC(A37):DG(K151) DC(A38):DG(K150) DG(A39):DC(K149) DA(A40):DT(K148) DG(A41):DC(K147) DG(A42):DC(K146) DC(A43):DG(K145) DC(A44):DG(K144) DG(A45):DC(K143) DC(A46):DG(K142) DT(A47):DA(K141) DC(A48):DG(K140) DA(A49):DT(K139) DA(A50):DT(K138) DT(A51):DA(K137) DT(A52):DA(K136) DG(A53):DC(K135) DG(A54):DC(K134) DT(A55):DA(K133) DC(A56):DG(K132) DG(A57):DC(K131) DT(A58):DA(K130) DA(A59):DT(K129) DG(A60):DC(K128) DA(A61):DT(K127) DC(A62):DG(K126) DG(A64):DC(K124) DC(A65):DG(K123) DT(A66):DA(K122) DC(A67):DG(K121) DT(A68):DA(K120) DA(A69):DT(K119) DG(A70):DC(K118) DC(A71):DG(K117) DA(A72):DT(K116) DC(A73):DG(K115) DC(A74):DG(K114) DG(A75):DC(K113) DC(A76):DG(K112) DT(K77):DA(K111) DT(A78):DA(K110) DA(A79):DT(K109) DA(A80):DT(K108) DA(A81):DT(K107) DC(A82):DG(K106) DG(A83):DC(K105) DC(A84):DG(K104) DA(A85):DT(K103) DC(A86):DG(K102) DG(A87):DC(K101) DT(A88):DA(K100) DA(A89):DT(K99) DC(A90):DG(K98) DG(A91):DC(K97) DC(A92):DG(K96) DG(A93):DC(K95) DC(A94):DG(K94) DT(A95):DA(K93) DG(A96):DC(K92) DT(A97):DA(K91) DC(A98):DG(K90) DC(A99):DG(K89) DC(A100):DG(K88) DC(A101):DG(K87) DC(A102):DG(K86) DG(A103):DC(K85) DC(A104):DG(K84) DG(A105):DC(K83) DT(A106):DA(K81) DT(A108):DA(K80) DT(A109):DA(K79) DA(A110):DT(K78) DC(A112):DG(K76) DC(A113):DG(K75) DG(A114):DC(K74) DC(A115):DG(K73) DC(A116):DG(K72) DA(A117):DT(K71) DA(A118):DT(K70) DG(A119):DC(K69) DG(A120):DC(K68) DG(A121):DC(K67) DG(A122):DC(K66) DA(A123):DT(K65) DT(A124):DA(K64) DT(A125):DA(K63) DA(A126):DT(K62) DC(A127):DG(K61) DC(A129):DG(K59) DC(A130):DG(K58) DC(A131):DG(K57) DT(A132):DA(K56) DA(A133):DT(K55) DG(A134):DC(K54) DT(A135):DA(K53) DC(A136):DG(K52) DT(A137):DA(K51) DC(A138):DG(K50) DC(A139):DG(K49) DA(A140):DT(K48) DG(A141):DC(K47) DG(A142):DC(K46) DC(A143):DG(K45) DA(A144):DT(K44) DC(A145):DG(K43) DG(A146):DC(K42) DT(A147):DA(K41) DG(A148):DC(K40) DT(A149):DA(K39) DC(A150):DG(K38) DA(A151):DT(K37) DG(A152):DC(K36) DA(A153):DT(K35) DT(A154):DA(K34) DA(A155):DT(K33) DT(A156):DA(K32) DA(A157):DT(K31) DT(A158):DA(K30) DA(A159):DT(K29) DC(A160):DG(K28) DA(A161):DT(K27) DT(A162):DA(K26) DC(A163):DG(K25) DC(A164):DG(K24) DT(A165):DA(K23) DG(A166):DC(K22) DT(A167):DA(K21) DT(A168):DA(K20) DC(A169):DG(K19) DC(A170):DG(K18) DA(A171):DT(K17) DG(A172):DC(K16) DT(A173):DA(K15) DG(A174):DC(K14) DC(A175):DG(K13) DC(A176):DG(K12) DG(A177):DC(K11) DG(A178):DC(K10) chainM ( 8) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) THR10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/trakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/rktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavalqeaseaylvglfedtnlcgihakrvtipkdiqlarrirger/rhRKvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Trakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/krRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/tggvkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavalqeaseaylvglfedtnlcgihakrvtipkdiqlarrirger >7crp_BCDEFGHM:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NSD3 BEARING E1181K/T1232A DUAL MUTATION IN COMPLEX WITH 187-BP NCP (1:1 BINDING MODE) organism=XENOPUS LAEVIS / XENOPUS TROPICALIS DNA sequence DC(K10):DG(A178) DC(K11):DG(A177) DG(K12):DC(A176) DG(K13):DC(A175) DC(K14):DG(A174) DA(K15):DT(A173) DC(K16):DG(A172) DT(K17):DA(A171) DG(K18):DC(A170) DG(K19):DC(A169) DA(K20):DT(A168) DA(K21):DT(A167) DC(K22):DG(A166) DA(K23):DT(A165) DG(K24):DC(A164) DG(K25):DC(A163) DA(K26):DT(A162) DT(K27):DA(A161) DG(K28):DC(A160) DT(K29):DA(A159) DA(K30):DT(A158) DT(K31):DA(A157) DA(K32):DT(A156) DT(K33):DA(A155) DA(K34):DT(A154) DT(K35):DA(A153) DC(K36):DG(A152) DT(K37):DA(A151) DG(K38):DC(A150) DA(K39):DT(A149) DC(K40):DG(A148) DA(K41):DT(A147) DC(K42):DG(A146) DG(K43):DC(A145) DT(K44):DA(A144) DG(K45):DC(A143) DC(K46):DG(A142) DC(K47):DG(A141) DT(K48):DA(A140) DG(K49):DC(A139) DG(K50):DC(A138) DA(K51):DT(A137) DG(K52):DC(A136) DA(K53):DT(A135) DC(K54):DG(A134) DT(K55):DA(A133) DA(K56):DT(A132) DG(K57):DC(A131) DG(K58):DC(A130) DG(K59):DC(A129) DA(K60):DT(A128) DG(K61):DC(A127) DT(K62):DA(A126) DA(K63):DT(A125) DA(K64):DT(A124) DT(K65):DA(A123) DC(K66):DG(A122) DC(K67):DG(A121) DC(K68):DG(A120) DC(K69):DG(A119) DT(K70):DA(A118) DT(K71):DA(A117) DG(K72):DC(A116) DG(K73):DC(A115) DC(K74):DG(A114) DG(K75):DC(A113) DG(K76):DC(A112) DT(K77):DA(A111) DT(K78):DA(A110) DA(K79):DT(A109) DA(K80):DT(A108) DA(K81):DT(A107) DA(K82):DT(A106) DC(K83):DG(A105) DG(K84):DC(A104) DC(K85):DG(A103) DG(K86):DC(A102) DG(K87):DC(A101) DG(K88):DC(A100) DG(K89):DC(A99) DG(K90):DC(A98) DA(K91):DT(A97) DC(K92):DG(A96) DA(K93):DT(A95) DG(K94):DC(A94) DC(K95):DG(A93) DG(K96):DC(A92) DC(K97):DG(A91) DG(K98):DC(A90) DT(K99):DA(A89) DA(K100):DT(A88) DC(K101):DG(A87) DG(K102):DC(A86) DT(K103):DA(A85) DG(K104):DC(A84) DC(K105):DG(A83) DG(K106):DC(A82) DT(K107):DA(A81) DT(K108):DA(A80) DT(K109):DA(A79) DA(K110):DT(A78) DA(K111):DT(A77) DG(K112):DC(A76) DC(K113):DG(A75) DG(K114):DC(A74) DG(K115):DC(A73) DT(K116):DA(A72) DG(K117):DC(A71) DC(K118):DG(A70) DT(K119):DA(A69) DA(K120):DT(A68) DG(K121):DC(A67) DA(K122):DT(A66) DG(K123):DC(A65) DC(K124):DG(A64) DT(K125):DA(A63) DG(K126):DC(A62) DT(K127):DA(A61) DC(K128):DG(A60) DT(K129):DA(A59) DA(K130):DT(A58) DC(K131):DG(A57) DG(K132):DC(A56) DA(K133):DT(A55) DC(K134):DG(A54) DC(K135):DG(A53) DA(K136):DT(A52) DA(K137):DT(A51) DT(K138):DA(A50) DT(K139):DA(A49) DG(K140):DC(A48) DA(K141):DT(A47) DG(K142):DC(A46) DC(K143):DG(A45) DG(K144):DC(A44) DG(K145):DC(A43) DC(K146):DG(A42) DC(K147):DG(A41) DT(K148):DA(A40) DG(K150):DC(A38) DG(K151):DC(A37) DC(K152):DG(A36) DA(K153):DT(A35) DC(K154):DG(A34) DC(K155):DG(A33) DG(K156):DC(A32) DG(K157):DC(A31) DA(K159):DT(A29) DT(K160):DA(A28) DT(K161):DA(A27) DC(K162):DG(A26) DT(K163):DA(A25) DC(K164):DG(A24) DC(K165):DG(A23) DA(K166):DT(A22) DG(K167):DC(A21) DG(K168):DC(A20) DG(K169):DC(A19) DG(K170):DC(A18) DA(K171):DT(A17) DT(K172):DA(A16) DC(K173):DG(A15) DG(K174):DC(A14) DG(K175):DC(A13) DG(K176):DC(A12) DC(K177):DG(A11) chainM ( 8) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) THR10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) THR10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/Trakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/Rktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavalqeaseaylvglfedtnlcgihakrvtipkdiqlarrirger/rhrKvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Trakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/krRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/tggvkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavalqeaseaylvglfedtnlcgihakrvtipkdiqlarrirger >7crp_C:Histone-fold; title=NSD3 BEARING E1181K/T1232A DUAL MUTATION IN COMPLEX WITH 187-BP NCP (1:1 BINDING MODE) organism=? DNA sequence DC(K10):DG(A178) DC(K11):DG(A177) DG(K12):DC(A176) DG(K13):DC(A175) DC(K14):DG(A174) DA(K15):DT(A173) DC(K16):DG(A172) DT(K17):DA(A171) DG(K18):DC(A170) DG(K19):DC(A169) DA(K20):DT(A168) DA(K21):DT(A167) DC(K22):DG(A166) DA(K23):DT(A165) DG(K24):DC(A164) DG(K25):DC(A163) DA(K26):DT(A162) DT(K27):DA(A161) DG(K28):DC(A160) DT(K29):DA(A159) DA(K30):DT(A158) DT(K31):DA(A157) DA(K32):DT(A156) DT(K33):DA(A155) DA(K34):DT(A154) DT(K35):DA(A153) DC(K36):DG(A152) DT(K37):DA(A151) DG(K38):DC(A150) DA(K39):DT(A149) DC(K40):DG(A148) DA(K41):DT(A147) DC(K42):DG(A146) DG(K43):DC(A145) DT(K44):DA(A144) DG(K45):DC(A143) DC(K46):DG(A142) DC(K47):DG(A141) DT(K48):DA(A140) DG(K49):DC(A139) DG(K50):DC(A138) DA(K51):DT(A137) DG(K52):DC(A136) DA(K53):DT(A135) DC(K54):DG(A134) DT(K55):DA(A133) DA(K56):DT(A132) DG(K57):DC(A131) DG(K58):DC(A130) DG(K59):DC(A129) DA(K60):DT(A128) DG(K61):DC(A127) DT(K62):DA(A126) DA(K63):DT(A125) DA(K64):DT(A124) DT(K65):DA(A123) DC(K66):DG(A122) DC(K67):DG(A121) DC(K68):DG(A120) DC(K69):DG(A119) DT(K70):DA(A118) DT(K71):DA(A117) DG(K72):DC(A116) DG(K73):DC(A115) DC(K74):DG(A114) DG(K75):DC(A113) DG(K76):DC(A112) DT(K77):DA(A111) DT(K78):DA(A110) DA(K79):DT(A109) DA(K80):DT(A108) DA(K81):DT(A107) DA(K82):DT(A106) DC(K83):DG(A105) DG(K84):DC(A104) DC(K85):DG(A103) DG(K86):DC(A102) DG(K87):DC(A101) DG(K88):DC(A100) DG(K89):DC(A99) DG(K90):DC(A98) DA(K91):DT(A97) DC(K92):DG(A96) DA(K93):DT(A95) DG(K94):DC(A94) DC(K95):DG(A93) DG(K96):DC(A92) DC(K97):DG(A91) DG(K98):DC(A90) DT(K99):DA(A89) DA(K100):DT(A88) DC(K101):DG(A87) DG(K102):DC(A86) DT(K103):DA(A85) DG(K104):DC(A84) DC(K105):DG(A83) DG(K106):DC(A82) DT(K107):DA(A81) DT(K108):DA(A80) DT(K109):DA(A79) DA(K110):DT(A78) DA(K111):DT(A77) DG(K112):DC(A76) DC(K113):DG(A75) DG(K114):DC(A74) DG(K115):DC(A73) DT(K116):DA(A72) DG(K117):DC(A71) DC(K118):DG(A70) DT(K119):DA(A69) DA(K120):DT(A68) DG(K121):DC(A67) DA(K122):DT(A66) DG(K123):DC(A65) DC(K124):DG(A64) DT(K125):DA(A63) DG(K126):DC(A62) DT(K127):DA(A61) DC(K128):DG(A60) DT(K129):DA(A59) DA(K130):DT(A58) DC(K131):DG(A57) DG(K132):DC(A56) DA(K133):DT(A55) DC(K134):DG(A54) DC(K135):DG(A53) DA(K136):DT(A52) DA(K137):DT(A51) DT(K138):DA(A50) DT(K139):DA(A49) DG(K140):DC(A48) DA(K141):DT(A47) DG(K142):DC(A46) DC(K143):DG(A45) DG(K144):DC(A44) DG(K145):DC(A43) DC(K146):DG(A42) DC(K147):DG(A41) DT(K148):DA(A40) DG(K150):DC(A38) DG(K151):DC(A37) DC(K152):DG(A36) DA(K153):DT(A35) DC(K154):DG(A34) DC(K155):DG(A33) DG(K156):DC(A32) DG(K157):DC(A31) DA(K159):DT(A29) DT(K160):DA(A28) DT(K161):DA(A27) DC(K162):DG(A26) DT(K163):DA(A25) DC(K164):DG(A24) DC(K165):DG(A23) DA(K166):DT(A22) DG(K167):DC(A21) DG(K168):DC(A20) DG(K169):DC(A19) DG(K170):DC(A18) DA(K171):DT(A17) DT(K172):DA(A16) DC(K173):DG(A15) DG(K174):DC(A14) DG(K175):DC(A13) DG(K176):DC(A12) DC(K177):DG(A11) chainC ( 1) THR10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Trakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >7crr_BCDEFGHM:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NATIVE NSD3 BOUND TO 187-BP NUCLEOSOME organism=XENOPUS LAEVIS / XENOPUS TROPICALIS DNA sequence DC(K10):DG(A178) DC(K11):DG(A177) DG(K12):DC(A176) DG(K13):DC(A175) DC(K14):DG(A174) DA(K15):DT(A173) DC(K16):DG(A172) DT(K17):DA(A171) DG(K18):DC(A170) DG(K19):DC(A169) DA(K20):DT(A168) DA(K21):DT(A167) DC(K22):DG(A166) DA(K23):DT(A165) DG(K24):DC(A164) DG(K25):DC(A163) DA(K26):DT(A162) DT(K27):DA(A161) DG(K28):DC(A160) DT(K29):DA(A159) DA(K30):DT(A158) DT(K31):DA(A157) DA(K32):DT(A156) DT(K33):DA(A155) DA(K34):DT(A154) DT(K35):DA(A153) DC(K36):DG(A152) DT(K37):DA(A151) DG(K38):DC(A150) DA(K39):DT(A149) DC(K40):DG(A148) DA(K41):DT(A147) DC(K42):DG(A146) DG(K43):DC(A145) DT(K44):DA(A144) DG(K45):DC(A143) DC(K46):DG(A142) DC(K47):DG(A141) DT(K48):DA(A140) DG(K49):DC(A139) DG(K50):DC(A138) DA(K51):DT(A137) DG(K52):DC(A136) DA(K53):DT(A135) DC(K54):DG(A134) DT(K55):DA(A133) DA(K56):DT(A132) DG(K57):DC(A131) DG(K58):DC(A130) DG(K59):DC(A129) DG(K61):DC(A127) DT(K62):DA(A126) DA(K63):DT(A125) DA(K64):DT(A124) DT(K65):DA(A123) DC(K66):DG(A122) DC(K67):DG(A121) DC(K68):DG(A120) DC(K69):DG(A119) DT(K70):DA(A118) DT(K71):DA(A117) DG(K72):DC(A116) DG(K73):DC(A115) DC(K74):DG(A114) DG(K75):DC(A113) DG(K76):DC(A112) DT(K77):DA(A111) DT(K78):DA(A110) DA(K79):DT(A109) DA(K80):DT(A108) DA(K81):DT(A107) DA(K82):DT(A106) DC(K83):DG(A105) DG(K84):DC(A104) DC(K85):DG(A103) DG(K86):DC(A102) DG(K87):DC(A101) DG(K88):DC(A100) DG(K89):DC(A99) DG(K90):DC(A98) DA(K91):DT(A97) DC(K92):DG(A96) DA(K93):DT(A95) DG(K94):DC(A94) DC(K95):DG(A93) DG(K96):DC(A92) DC(K97):DG(A91) DG(K98):DC(A90) DT(K99):DA(A89) DA(K100):DT(A88) DC(K101):DG(A87) DG(K102):DC(A86) DT(K103):DA(A85) DG(K104):DC(A84) DC(K105):DG(A83) DG(K106):DC(A82) DT(K107):DA(A81) DT(K108):DA(A80) DT(K109):DA(A79) DA(K110):DT(A78) DA(K111):DT(A77) DG(K112):DC(A76) DC(K113):DG(A75) DG(K114):DC(A74) DG(K115):DC(A73) DT(K116):DA(A72) DG(K117):DC(A71) DT(K119):DA(A69) DA(K120):DT(A68) DG(K121):DC(A67) DA(K122):DT(A66) DG(K123):DC(A65) DC(K124):DG(A64) DT(K125):DA(A63) DG(K126):DC(A62) DT(K127):DA(A61) DC(K128):DG(A60) DT(K129):DA(A59) DA(K130):DT(A58) DC(K131):DG(A57) DG(K132):DC(A56) DA(K133):DT(A55) DC(K134):DG(A54) DC(K135):DG(A53) DA(K136):DT(A52) DA(K137):DT(A51) DT(K139):DA(A49) DG(K140):DC(A48) DA(K141):DT(A47) DG(K142):DC(A46) DC(K143):DG(A45) DG(K144):DC(A44) DG(K145):DC(A43) DC(K146):DG(A42) DC(K147):DG(A41) DT(K148):DA(A40) DC(K149):DG(A39) DG(K150):DC(A38) DG(K151):DC(A37) DC(K152):DG(A36) DA(K153):DT(A35) DC(K154):DG(A34) DC(K155):DG(A33) DG(K156):DC(A32) DG(K157):DC(A31) DG(K158):DC(A30) DA(K159):DT(A29) DT(K160):DA(A28) DT(K161):DA(A27) DC(K162):DG(A26) DT(K163):DA(A25) DC(K164):DG(A24) DC(K165):DG(A23) DA(K166):DT(A22) DG(K167):DC(A21) DG(K168):DC(A20) DG(K169):DC(A19) DG(K170):DC(A18) DA(K171):DT(A17) DT(K172):DA(A16) DC(K173):DG(A15) DG(K174):DC(A14) DG(K175):DC(A13) DG(K176):DC(A12) DC(K177):DG(A11) chainM ( 51) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) THR10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/trakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/rktrkesyaiyvykvlkqvhpdtgisskamsiMnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavalqeaseaylvglfedtnlcgihakrvtipkdiqlarrirger/rhRKvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Trakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/krRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/tggvkphryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavalqeaseaylvglfedtnlcgihakrvtipkdiqlarrirger >7csw_B:lambda_repressor-like_DNA-binding_domains; title=PSEUDOMONAS AERUGINOSA ANTITOXIN HIGA WITH PA2440 PROMOTER organism=PSEUDOMONAS AERUGINOSA PAO1 DNA sequence DA(C1):DT(D7) DT(C2):DA(D6) DT(C3):DA(D5) DG(C4):DC(D4) DC(C5):DG(D3) DG(C6):DC(D2) DA(C7):DT(D1) chainB ( 30) SER37 0 0 0 0 0 4 0 ( 32) PRO39 0 0 0 0 0 0 1 ( 42) ARG49 0 0 0 0 6 0 0 prot.sequence pihpgeilrdeflmefdispaalaralkvSaPTvndivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheieplla >7csy_A:lambda_repressor-like_DNA-binding_domains; title=PSEUDOMONAS AERUGINOSA ANTITOXIN HIGA WITH HIGBA PROMOTER organism=PSEUDOMONAS AERUGINOSA PAO1 DNA sequence DA(E1):DT(F101) DA(E3):DT(F29) DG(E4):DC(F28) DT(E5):DA(F27) DT(E6):DA(F26) DA(E7):DT(F25) DA(E8):DT(F24) DC(E9):DG(F23) DG(E10):DC(F22) DC(E11):DG(F21) DT(E12):DA(F20) DT(E13):DA(F19) DA(E14):DT(F18) DA(E15):DT(F17) DC(E16):DG(F16) DG(E17):DC(F15) DT(E18):DA(F14) DT(E19):DA(F13) DA(E20):DT(F12) DA(E21):DT(F11) DG(E22):DC(F10) DG(E23):DC(F9) DG(E24):DC(F8) DT(E25):DA(F7) DT(E26):DA(F6) DA(E27):DT(F5) DA(E28):DT(F4) DT(E29):DA(F3) chainA ( 31) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ALA38 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) PRO39 0 0 0 0 0 0 0 0 0 0 0 3 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN42 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rpihpgeilrdeflmefdispaalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepll >7csy_ABCD:lambda_repressor-like_DNA-binding_domains; title=PSEUDOMONAS AERUGINOSA ANTITOXIN HIGA WITH HIGBA PROMOTER organism=PSEUDOMONAS AERUGINOSA PAO1 DNA sequence DA(E1):DT(F101) DA(E3):DT(F29) DG(E4):DC(F28) DT(E5):DA(F27) DT(E6):DA(F26) DA(E7):DT(F25) DA(E8):DT(F24) DC(E9):DG(F23) DG(E10):DC(F22) DC(E11):DG(F21) DT(E12):DA(F20) DT(E13):DA(F19) DA(E14):DT(F18) DA(E15):DT(F17) DC(E16):DG(F16) DG(E17):DC(F15) DT(E18):DA(F14) DT(E19):DA(F13) DA(E20):DT(F12) DA(E21):DT(F11) DG(E22):DC(F10) DG(E23):DC(F9) DG(E24):DC(F8) DT(E25):DA(F7) DT(E26):DA(F6) DA(E27):DT(F5) DA(E28):DT(F4) DT(E29):DA(F3) chainA ( 31) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ALA38 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) PRO39 0 0 0 0 0 0 0 0 0 0 0 3 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN42 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 37) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 ( 38) ALA38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 1 0 0 ( 42) ASN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 49) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 chainC ( 23) ALA28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 32) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 33) ALA38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 34) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 3 0 0 0 0 0 0 0 0 0 ( 37) ASN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 44) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 25) ALA28 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) SER37 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) ALA38 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) PRO39 0 0 0 0 4 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) ASN42 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG49 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rpihpgeilrdeflmefdispaalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepll/matngmrpihpgeilrdeflmefdispaalaralkvSAPTvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepl/mrpihpgeilrdeflmefdispAalaralkvSAPTvNDivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepl/ngmrpihpgeilrdeflmefdispAalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepll >7cuh_A:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF FISSION YEAST POT1 AND SSDNA organism=Schizosaccharomyces pombe (strain 972 / ATCC 24843) / Schizosaccharomyces pombe (strain 972 / ATCC 24843) DNA sequence DG(B17) DG(B16) DC(B15) DG(B1) DG(B2) DT(B3) DT(B4) DA(B5) DC(B6) DA(B7) DG(B8) DG(B9) DG(B10) DG(B11) DT(B12):DC(B15) DT(B13) DA(B14) chainA ( 51) SER58 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 55) THR62 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 ( 57) ASP64 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 0 0 ( 77) GLN84 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 79) HIS86 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 ( 81) PHE88 0 0 0 0 1 0 23 2 0 0 0 0 0 0 0 0 0 ( 83) LYS90 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (104) THR111 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 (106) ARG113 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (108) TYR115 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 (113) GLN120 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 (115) LEU122 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (117) LYS124 0 0 0 13 4 0 0 0 0 0 0 0 0 0 0 0 0 (118) ASP125 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) LYS221 1 9 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (191) TRP223 1 64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) LYS227 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (196) ASN228 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (200) TYR232 0 4 2 0 0 0 0 0 0 0 0 0 0 0 3 0 4 (211) PHE243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 (213) MET245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (221) ARG253 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ARG264 0 0 1 0 0 0 0 0 0 0 0 0 0 3 6 1 18 (234) ILE266 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 (236) TRP268 0 0 0 0 0 0 0 0 0 0 0 0 58 7 0 0 0 (237) ASP269 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 (261) LYS293 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (263) ASP295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (265) LEU297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 (267) TYR299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (269) GLU301 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 (271) ILE303 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (273) HIS305 0 0 0 0 0 0 0 0 0 0 0 34 12 0 0 0 0 (275) ASP307 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (276) SER308 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (277) ALA309 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (279) ARG311 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (280) TYR312 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 prot.sequence slqlnellnageykigeltfqsirssqelqkkntivnlfgivkdftpsrqSlhgTkDwvttvylwdptcdtssiglQiHlFsKqgndlpvikqvgqplllhqiTlRsYrdrtQgLsKDqfryalwpdfssnskdtlcpqpmprlmktgdkeeqfalllnkiwdeqtvsfsllsqitphqrcsfyaqviKtWYsdKNftlYvtdytenelfFpMspytsssRwrgpfgrfsiRcIlWDehdfycrnyikegdyvvmknvrtKiDhLgYlEcIlHgDSAkRYnmsiekvdseepelneiksrkrlyv >7cvo_A:Histone-fold; title=CRYSTAL STRUCTURE OF ARABIDOPSIS CO CCT DOMAIN IN COMPLEX WITH NF- YB3/YC4 AND FT CORE2 DNA organism=ARABIDOPSIS THALIANA DNA sequence DA(D2):DT(E25) DA(D3):DT(E24) DA(D4):DT(E23) DA(D5):DT(E22) DA(D6):DT(E21) DG(D7):DC(E20) DA(D8):DT(E19) DT(D9):DA(E18) DT(D10):DA(E17) DG(D11):DC(E16) DT(D12):DA(E15) DG(D13):DC(E14) DG(D14):DC(E13) DT(D15):DA(E12) DT(D16):DA(E11) DA(D17):DT(E10) DT(D18):DA(E9) DG(D19):DC(E8) DA(D20):DT(E7) DT(D21):DA(E6) DT(D22):DA(E5) DT(D23):DA(E4) DC(D24):DG(E3) DC(D25):DG(E2) chainA ( 9) LYS85 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG331 0 0 0 0 0 0 0 8 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) ALA335 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) ARG338 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ARG340 0 0 0 0 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 (127) ARG344 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 (128) PHE345 0 0 0 0 0 0 0 0 0 0 20 33 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hqlplariKkimkadedvrmisaeapilfakacelfileltirswlhaeenkrrtlqkndiaaaitrtdifdflvdivprvtqlspmdrearvlryrekrktrkfektiryasRkayAeiRpRvngRFak >7cvo_AB:Histone-fold; title=CRYSTAL STRUCTURE OF ARABIDOPSIS CO CCT DOMAIN IN COMPLEX WITH NF- YB3/YC4 AND FT CORE2 DNA organism=ARABIDOPSIS THALIANA DNA sequence DG(E2):DC(D25) DG(E3):DC(D24) DA(E4):DT(D23) DA(E5):DT(D22) DA(E6):DT(D21) DT(E7):DA(D20) DC(E8):DG(D19) DA(E9):DT(D18) DT(E10):DA(D17) DA(E11):DT(D16) DA(E12):DT(D15) DC(E13):DG(D14) DC(E14):DG(D13) DA(E15):DT(D12) DC(E16):DG(D11) DA(E17):DT(D10) DA(E18):DT(D9) DT(E19):DA(D8) DC(E20):DG(D7) DT(E21):DA(D6) DT(E22):DA(D5) DT(E23):DA(D4) DT(E24):DA(D3) DT(E25):DA(D2) chainA ( 9) LYS85 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (114) ARG331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 13 8 0 0 0 0 0 0 0 (118) ALA335 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (121) ARG338 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 (123) ARG340 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 (127) ARG344 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 (128) PHE345 0 0 0 0 0 0 0 0 0 0 0 0 33 20 0 0 0 0 0 0 0 0 0 0 chainB ( 25) LYS47 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hqlplariKkimkadedvrmisaeapilfakacelfileltirswlhaeenkrrtlqkndiaaaitrtdifdflvdivprvtqlspmdrearvlryrekrktrkfektiryasRkayAeiRpRvngRFak/drflpianvsrimkkalpanakisKdaketvqecvsefisfitgeasdkcqrekrktingddllwamttlgfedyveplkvylqkyre >7cvo_B:Histone-fold; title=CRYSTAL STRUCTURE OF ARABIDOPSIS CO CCT DOMAIN IN COMPLEX WITH NF- YB3/YC4 AND FT CORE2 DNA organism=ARABIDOPSIS THALIANA DNA sequence DA(D2):DT(E25) DA(D3):DT(E24) DA(D4):DT(E23) DA(D5):DT(E22) DA(D6):DT(E21) DG(D7):DC(E20) DA(D8):DT(E19) DT(D9):DA(E18) DT(D10):DA(E17) DG(D11):DC(E16) DT(D12):DA(E15) DG(D13):DC(E14) DG(D14):DC(E13) DT(D15):DA(E12) DT(D16):DA(E11) DA(D17):DT(E10) DT(D18):DA(E9) DG(D19):DC(E8) DA(D20):DT(E7) DT(D21):DA(E6) DT(D22):DA(E5) DT(D23):DA(E4) DC(D24):DG(E3) DC(D25):DG(E2) chainB ( 25) LYS47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence drflpianvsrimkkalpanakisKdaketvqecvsefisfitgeasdkcqrekrktingddllwamttlgfedyveplkvylqkyre >7cvq_AB:Histone-fold; title=CRYSTAL STRUCTURE OF ARABIDOPSIS CO CCT DOMAIN IN COMPLEX WITH NF- YB2/YC3 AND FT CORE1 DNA organism=? DNA sequence DG(D2):DC(E25) DC(D4):DT(E24) DA(D5):DG(E23) DA(D6):DT(E22) DT(D7):DA(E20) DG(D8):DC(E19) DT(D9):DA(E18) DG(D10):DC(E17) DT(D11):DA(E16) DG(D12):DC(E15) DA(D13):DT(E14) DT(D14):DA(E13) DG(D15):DC(E12) DT(D16):DA(E11) DC(D18):DT(E10) DG(D19):DC(E8) DT(D20):DA(E7) DA(D21):DT(E6) DG(D22):DC(E5) DA(D23):DT(E4) DA(D24):DT(E3) DT(D25):DA(E2) chainA (111) ARG331 0 0 0 0 2 4 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) ALA335 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) ARG338 0 0 0 0 0 0 0 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) ARG340 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (124) ARG344 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 (125) PHE345 0 0 0 0 0 0 0 0 26 30 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence fknhslplarikkimkadedvrmisaeapvvfaracemfileltlrswnhteenkrrtlqkndiaaavtrtdifdflvdivprmdrearvlryrekrktrkfektiryasRkayAeiRpRvngRF/drflpianvsrimkkalpanakiskdaketmqecvsefisfvtgeasdkcqkekrktingddllwamttlgfedyveplkvylqr >7cvq_F:Histone-fold; title=CRYSTAL STRUCTURE OF ARABIDOPSIS CO CCT DOMAIN IN COMPLEX WITH NF- YB2/YC3 AND FT CORE1 DNA organism=ARABIDOPSIS THALIANA DNA sequence DA(J2):DT(I25) DT(J3):DA(I24) DT(J4):DA(I23) DC(J5):DG(I22) DT(J6):DA(I21) DA(J7):DT(I20) DC(J8):DG(I19) DG(J9):DC(I18) DT(J10):DA(I17) DA(J11):DT(I16) DC(J12):DG(I15) DA(J13):DT(I14) DT(J14):DA(I13) DC(J15):DG(I12) DA(J16):DT(I11) DC(J17):DG(I10) DA(J18):DT(I9) DC(J19):DG(I8) DA(J20):DT(I7) DT(J22):DA(I6) DG(J23):DA(I5) DT(J24):DA(I3) DC(J25):DG(I2) chainF (104) LYS324 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (111) ARG331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 7 3 2 0 0 0 0 (115) ALA335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (118) ARG338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 2 0 0 0 0 0 0 (120) ARG340 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (124) ARG344 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 (125) PHE345 0 0 0 0 0 0 0 0 0 0 0 0 0 33 30 0 0 0 0 0 0 0 0 prot.sequence fknhslplarikkimkadedvrmisaeapvvfaracemfileltlrswnhteenkrrtlqkndiaaavtrtdifdflvdivprmdrearvlryrekrktrkfeKtiryasRkayAeiRpRvngRF >7cvq_KL:Histone-fold; title=CRYSTAL STRUCTURE OF ARABIDOPSIS CO CCT DOMAIN IN COMPLEX WITH NF- YB2/YC3 AND FT CORE1 DNA organism=ARABIDOPSIS THALIANA DNA sequence DA(O2):DT(N25) DT(O3):DA(N24) DT(O4):DA(N23) DC(O5):DG(N22) DT(O6):DA(N21) DA(O7):DT(N20) DC(O8):DG(N19) DG(O9):DC(N18) DT(O10):DA(N17) DA(O11):DT(N16) DC(O12):DG(N15) DT(O14):DA(N13) DC(O15):DG(N12) DA(O16):DT(N11) DC(O17):DG(N10) DA(O18):DT(N9) DC(O19):DG(N8) DA(O20):DT(N7) DT(O22):DA(N6) DG(O23):DA(N5) DT(O24):DA(N3) DC(O25):DG(N2) chainK (109) ARG331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 1 0 0 0 0 0 (113) ALA335 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (116) ARG338 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 1 0 0 0 0 0 0 chainL ( 7) ALA35 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nhslplarikkimkadedvrmisaeapvvfaracemfileltlrswnhteenkrrtlqkndiaaavtrtdifdflvdivprmdrearvlryrekrktrkfektiryasRkayAeiRp/drflpiAnvsrimkkalpanakiskdaketmqecvsefisfvtgeasdkcqkekrktingddllwamttlgfedyveplkvylqrf >7cvq_PQ:Histone-fold; title=CRYSTAL STRUCTURE OF ARABIDOPSIS CO CCT DOMAIN IN COMPLEX WITH NF- YB2/YC3 AND FT CORE1 DNA organism=ARABIDOPSIS THALIANA DNA sequence DA(U2):DT(T25) DT(U3):DA(T24) DT(U4):DA(T23) DC(U5):DG(T22) DT(U6):DA(T21) DA(U7):DT(T20) DC(U8):DG(T19) DG(U9):DC(T18) DT(U10):DA(T17) DA(U11):DT(T16) DC(U12):DG(T15) DA(U13):DT(T14) DT(U14):DA(T13) DC(U15):DG(T12) DA(U16):DT(T11) DC(U17):DG(T10) DC(U19):DG(T8) DT(U21):DT(T7) DT(U22):DA(T6) DG(U23):DA(T5) chainP (107) ARG331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 (111) ALA335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (114) ARG338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 (116) ARG340 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 (120) ARG344 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 (121) PHE345 0 0 0 0 0 0 0 0 0 0 0 0 0 29 18 0 0 0 0 0 chainQ ( 7) ALA35 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hslplarikkimkadedvrmisaeapvvfaracemfileltlrswnhteenkrrtlqkndiaaavtrtdifdflvdivpmdrearvlryrekrktrkfektiryasRkayAeiRpRvngRF/drflpiAnvsrimkkalpanakiskdaketmqecvsefisfvtgeasdkcqkekrktingddllwamttlgfedyveplkvylqrf >7cy6_A:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF CMD1 IN COMPLEX WITH 5MC-DNA organism=ESCHERICHIA COLI, CHLAMYDOMONAS REINHARDTII DNA sequence DC(D1):DG(C10) DC(D2):DG(C9) DG(D4):DC(C7) DC(D5):DG(C6) DG(D6):DC(C5) DC(D7):DG(C4) chainA (625) ASN261 0 27 9 0 0 0 prot.sequence ieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaaraaamsvalaseyqlvqnaqlpqrwsqsarkslaileatarkeataqmeaaggsfcgqfpvdpafkvlsleysapnpdiarairrvdsvpnpplpshvvaiqstavdadlslamgvsltpgrhtsylvdaralqqsnsaavaarkadgdkwgpacdemfrgcrcvtgqevvfytavkepaslfkpsfdgpafrpswgelsgkatgvvacvlqvpigketdiicaeydnlvskgqfatvdrfggdhtvnmtgnaliqNdgkaiskgyavahrarvtsnvygkandvslqrlaetvwsvvekrlsfmpayrdlviteqgkpfmlgatatniisltenqgvmlhldtddgvwtiilwfhrhsgiiaggefvlpslgisfqpldftivvfaantivhgtrplqttgkiirwgsshflrfkdvnalaqlgaaygvdeldakqrdqleevdaanskdgvgaarrvascmaaerkaaieaqkaacvrgvvmnpctgrmpsllfwqvwrkpp >7cy7_A:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF CMD1 IN COMPLEX WITH DNA organism=ESCHERICHIA COLI, CHLAMYDOMONAS REINHARDTII DNA sequence DC(D1):DG(C10) DC(D2):DG(C9) DG(D4):DC(C7) DC(D5):DG(C6) DG(D6):DC(C5) DC(D7):DG(C4) chainA (626) ASN261 0 27 11 0 0 0 prot.sequence ieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaaraaamsvalaseyqlvqnaqlpqrwsqsarkslaileatarkeataqmeaaggsfcgqfpvdpafkvlsleysapnpdiarairrvdsvpnpplpshvvaiqstavdadlslamgvsltpgrhtsylvdaralqqsnsaavaarkadgdkwgpacdemfrgcrcvtgqevvfytavkepagslfkpsfdgpafrpswgelsgkatgvvacvlqvpigketdiicaeydnlvskgqfatvdrfggdhtvnmtgnaliqNdgkaiskgyavahrarvtsnvygkandvslqrlaetvwsvvekrlsfmpayrdlviteqgkpfmlgatatniisltenqgvmlhldtddgvwtiilwfhrhsgiiaggefvlpslgisfqpldftivvfaantivhgtrplqttgkiirwgsshflrfkdvnalaqlgaaygvdeldakqrdqleevdaanskdgvgaarrvascmaaerkaaieaqkaacvrgvvmnpctgrmpsllfwqvwrkp >7d1z_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF SET8-NUCLEOSOME COMPLEX organism=HOMO SAPIENS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) ALA10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH chainF prot.sequence pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/lRDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/kRhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkVflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ArakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RkesysiyvykvlkqvhpdtgisskamgimnsFvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7d20_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF SET8-CENP-A-NUCLEOSOME COMPLEX organism=HOMO SAPIENS DNA sequence DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DG(I-24):DT(J25) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) chainA chainE chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ALA10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence gwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirg/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/Rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/Qgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgl/Krhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ArakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RkesysiyvykvlkqvhpdtgisskamgimnsFvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7d20_G:Histone-fold; title=CRYO-EM STRUCTURE OF SET8-CENP-A-NUCLEOSOME COMPLEX organism=? DNA sequence DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DT(J25):DG(I-24) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) chainG ( 1) ALA10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ArakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >7d2l_A: title=CRYSTAL STRUCTURE OF THE CAS12I1 R-LOOP COMPLEX BEFORE TARGET DNA CLEAVAGE organism=LACHNOSPIRACEAE BACTERIUM ND2006 DNA sequence DT(C5):DG(D29) DA(C6):DT(D28) DT(C7):DC(D27) DT(C8):DG(D26) DC(C9):DC(D25) DC(C10):DG(D24) DA(C11):DG(D23) DT(C12):DA(D22) DT(C13):DA(D21) DC(C14):DC(D20) DC(C15):DG(D19) DT(C16):DG(D18) DT(C17):DA(D17) DA(C18):DA(D16) DA(C19):DT(D12) DT(C20):DA(D11) DA(C21):DT(D10) DG(C22):DC(D9) DA(C23):DT(D8) DA(C24):DT(D7) DC(C25):DG(D6) DT(C26):DA(D5) DA(C27):DT(D4) DG(C28):DC(D3) DA(C29):DT(D2) DC(C30):DG(D1) chainA ( 6) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 (161) SER167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (162) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 (164) HIS170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 9 0 0 0 0 0 0 (165) TYR171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 (168) SER174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 (228) LYS234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 3 0 0 0 (230) ALA236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 (292) LEU298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 (309) MET315 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (312) LYS318 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (475) ASN481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 4 0 0 0 0 0 (476) SER482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 3 0 0 0 0 0 0 (623) ALA629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (644) ILE650 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (753) LYS759 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (882) ILE896 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (883) SER897 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (890) LYS904 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (894) THR908 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (897) PHE911 0 0 0 45 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (898) LEU912 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (901) TRP915 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (926) ASN940 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (927) PRO941 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (928) ASN942 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (960) LYS974 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nasetRkayttkmiprshdrmkllgnfmdylmdgtpiffelwnqfgggidrdiisgtankdkisddlllavnwfkvmpinskpqgvspsnlanlfqqysgsepdiqaqeyfasnfdtekhqwkdmrveyerllaelqlsrsdmhhdlklmykekciglslSTaHYitSvmfgtgaknnrqtkhqfyskviqlleestqinsveqlasiilkagdcdsyrklrircsrKgAtpsilkivqdyelgtnhddevnvpslianlkeklgrfeyecewkcmekikaflaskvgpyyLgsysamlenalspikgMttKnckfvlkqidakndikyenepfgkivegffdspyfesdtnvkwvlhphhigesniktlwedlnaihskyeediaslsedkkekrikvyqgdvcqtintyceevgkeaktplvqllrylysrkddiavdkiidgitflskkhkvekqkinpviqkypsfnfgnNSkllgkiispkdklkhnlkcnrnqvdnyiwieikvlntktmrwekhhyalsstrfleevyypatsenppdalaarfrtktngyegkpalsaeqieqirsapvglrkvkkrqmrleaarqqnllprytwgkdfninickrgnnfevtlAtkvkkkkeknykvvlgyaanIvrkntyaaieahangdgvidyndlpvkpiesgfvtvesqvrdksydqlsyngvkllyckphvesrrsflekyrngtmkdnrgnniqidfmkdfeaiaddetslyyfnmKyckllqssirnhssqakeyreeifellrdgklsvlklsslsnlsfvmfkvaksligtyfghllkkpappitdedkqkadpemfalrlaleekrlnkvkskkeviankivakalelrdkygpvlikgenISdttkkgKkssTnsFLmdWlargvankvkemvmmhqglefvevNPNftshqdpfvhknpentfrarysrctpselteKnrkeilsflsdkpskrptnayynegamaflatyglkkndvlgvslekfkqimanilhqrsedqllfpsrggmfylatykldadatsvnwngkqfwvcnadlvaaynvglvdiqkdfk >7d3j_A: title=CRYSTAL STRUCTURE OF THE CAS12I1 R-LOOP COMPLEX AFTER TARGET DNA CLEAVAGE organism=LACHNOSPIRACEAE BACTERIUM ND2006 DNA sequence DG(D1):DC(C28) DT(D2):DA(C27) DC(D3):DG(C26) DT(D4):DA(C25) DA(D5):DT(C24) DG(D6):DC(C23) DT(D7):DA(C22) DT(D8):DA(C21) DC(D9):DG(C20) chainA (162) THR168 0 0 0 0 0 0 0 0 16 (164) HIS170 0 0 0 0 0 0 8 4 3 (165) TYR171 0 0 0 0 0 0 0 7 9 (168) SER174 0 0 0 0 0 0 4 2 0 (228) LYS234 0 0 0 3 4 1 0 0 0 (230) ALA236 0 0 0 0 0 0 3 3 1 (292) LEU298 0 0 0 0 0 2 1 0 0 (475) ASN481 0 0 0 0 0 5 12 5 0 (476) SER482 0 0 0 0 0 0 2 7 2 prot.sequence nasetrkayttkmiprshdrmkllgnfmdylmdgtpiffelwnqfgggidrdiisgtankdkisddlllavnwfkvmpinskpqgvspsnlanlfqqysgsepdiqaqeyfasnfdtekhqwkdmrveyerllaelqlsrsdmhhdlklmykekciglslsTaHYitSvmfgtgaknnrqtkhqfyskviqlleestqinsveqlasiilkagdcdsyrklrircsrKgAtpsilkivqdyelgtnhddevnvpslianlkeklgrfeyecewkcmekikaflaskvgpyyLgsysamlenalspikgmttknckfvlkqidakndikyenepfgkivegffdspyfesdtnvkwvlhphhigesniktlwedlnaihskyeediaslsedkkekrikvyqgdvcqtintyceevgkeaktplvqllrylysrkddiavdkiidgitflskkhkvekqkinpviqkypsfnfgnNSkllgkiispkdklkhnlkcnrnqvdnyiwieikvlntktmrwekhhyalsstrfleevyypatsenppdalaarfrtktngyegkpalsaeqieqirsapvglrkvkkrqmrleaarqqnllprytwgkdfninickrgnnfevtlatkvkkkkeknykvvlgydanivrkntyaaieahangdgvidyndlpvkpiesgfvtvesqvrdksydqlsyngvkllyckphvesrrsflekyrngtmkdnrgnniqidfmkdfeaiaddetslyyfnmkyckllqssirnhssqakeyreeifellrdgklsvlklsslsnlsfvmfkvaksligtyfghllkkpappitdedkqkadpemfalrlaleekrlnkvkskkeviankivakalelrdkygpvlikgenisdttkkgkksstnsflmdwlargvankvkemvmmhqglefvevnpnftshqdpfvhknpentfrarysrctpselteknrkeilsflsdkpskrptnayynegamaflatyglkkndvlgvslekfkqimanilhqrsedqllfpsrggmfylatykldadatsvnwngkqfwvcnadlvaaynvglvdiqkdfk >7d3t_AB:Homeodomain-like; title=CRYSTAL STRUCTURE OF OSPHR2 IN COMPLEX WITH DNA organism=Oryza sativa subsp. indica DNA sequence DC(E2):DG(F16) DT(E3):DA(F15) DT(E4):DA(F14) DG(E5):DC(F13) DA(E6):DT(F12) DG(E7):DC(F11) DG(E8):DC(F10) DA(E9):DT(F9) DT(E10):DA(F8) DA(E11):DT(F7) DT(E12):DA(F6) DC(E13):DG(F5) DC(E14):DG(F4) DG(E15):DC(F3) DA(E16):DT(F2) chainA ( 2) ARG248 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 ( 46) LYS292 0 0 0 0 0 8 6 1 0 0 0 0 0 0 0 ( 47) SER293 0 0 0 0 0 0 0 1 8 2 0 0 0 0 0 ( 50) GLN296 0 0 0 0 0 0 8 12 2 0 0 0 0 0 0 ( 51) LYS297 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chainB ( 2) ARG248 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 46) LYS292 0 0 0 0 0 0 0 0 0 0 0 6 12 4 0 ( 47) SER293 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 ( 50) GLN296 0 0 0 0 0 0 0 0 0 1 10 7 0 0 0 ( 51) LYS297 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence tRmrwtpelherfvdavnllggsekatpkgvlklmkadnltiyhvKShlQKyrtaryrp/tRmrwtpelherfvdavnllggsekatpkgvlklmkadnltiyhvKShlQKyrtaryrp >7d3t_CD:Homeodomain-like; title=CRYSTAL STRUCTURE OF OSPHR2 IN COMPLEX WITH DNA organism=Oryza sativa subsp. indica DNA sequence DT(H2):DA(G16) DC(H3):DG(G15) DG(H4):DC(G14) DG(H5):DC(G13) DA(H6):DT(G12) DT(H7):DA(G11) DA(H8):DT(G10) DT(H9):DA(G9) DC(H10):DG(G8) DC(H11):DG(G7) DT(H12):DA(G6) DC(H13):DG(G5) DA(H14):DT(G4) DA(H15):DT(G3) DG(H16):DC(G2) chainC ( 2) ARG248 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 46) LYS292 0 0 11 9 0 0 0 0 0 0 0 0 0 0 0 ( 47) SER293 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 50) GLN296 0 0 0 8 11 2 0 0 0 0 0 0 0 0 0 ( 51) LYS297 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 chainD ( 2) ARG248 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 ( 46) LYS292 0 0 0 0 0 0 0 0 8 10 3 0 0 0 0 ( 47) SER293 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 50) GLN296 0 0 0 0 0 0 2 13 8 0 0 0 0 0 0 ( 51) LYS297 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence tRmrwtpelherfvdavnllggsekatpkgvlklmkadnltiyhvKShlQKyrtaryrp/tRmrwtpelherfvdavnllggsekatpkgvlklmkadnltiyhvKShlQKyrtaryrpels >7d3t_D:Homeodomain-like; title=CRYSTAL STRUCTURE OF OSPHR2 IN COMPLEX WITH DNA organism=Oryza sativa subsp. indica DNA sequence DC(G2):DG(H16) DT(G3):DA(H15) DT(G4):DA(H14) DG(G5):DC(H13) DA(G6):DT(H12) DG(G7):DC(H11) DG(G8):DC(H10) DA(G9):DT(H9) DT(G10):DA(H8) DA(G11):DT(H7) DT(G12):DA(H6) DC(G13):DG(H5) DC(G14):DG(H4) DG(G15):DC(H3) DA(G16):DT(H2) chainD ( 2) ARG248 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 ( 46) LYS292 0 0 0 0 3 10 8 0 0 0 0 0 0 0 0 ( 47) SER293 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 50) GLN296 0 0 0 0 0 0 8 13 2 0 0 0 0 0 0 ( 51) LYS297 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence tRmrwtpelherfvdavnllggsekatpkgvlklmkadnltiyhvKShlQKyrtaryrpels >7d3v_A:Cytidine_deaminase-like; title=NON-SPECIFIC AND SPECIFIC INTERACTIONS WORK COOPERATIVELY TO PROMOTE CYTIDINE DEAMINATION CATALYZED BY APOBEC3A organism=HOMO SAPIENS DNA sequence DA(D409) DT(D410) DT(D411) DT(D412) DT(D413) DC(D414) DA(D415) DA(D416) DT(D417) DT(D418) chainA ( 24) ASN24 1 0 0 0 0 0 0 0 0 0 ( 26) ILE26 0 1 0 2 0 0 0 0 0 0 ( 29) HIS29 0 0 0 0 0 0 13 0 0 0 ( 58) GLN58 0 0 0 0 0 0 0 1 0 0 ( 60) LYS60 0 0 0 0 0 0 0 20 14 0 ( 62) LEU62 0 0 0 0 0 0 0 0 0 1 ( 70) HIS70 0 0 0 0 0 23 0 0 0 0 ( 72) GLN72 0 0 0 0 0 1 0 0 0 0 ( 98) TRP98 0 0 0 0 0 49 0 0 0 0 (101) CYS101 0 0 0 0 0 4 0 0 0 0 (130) TYR130 0 0 0 0 2 8 0 0 0 0 (131) ASP131 0 0 0 5 16 0 0 0 0 0 (132) TYR132 0 0 0 0 5 0 0 0 0 0 (181) GLU181 29 0 0 0 0 0 0 0 0 0 (182) HIS182 32 0 0 0 0 0 0 0 0 0 (185) ALA185 0 3 0 0 0 0 0 0 0 0 (186) LEU186 0 1 0 0 0 0 0 0 0 0 (189) ARG189 0 0 3 3 0 0 0 0 0 0 prot.sequence measpasgprhlmdphiftsnfnNgIgrHktylcyeverldngtsvkmdqhrgflhnQaKnLnsgfygrHaQlrfldlvpslqldpaqiyrvtwfisWspCfswgcagevraflqenthvrlrifaariYDYdplykealqmlrdagaqvsimtydefkhcwdtfvdhqgqpfqpwdgldEHsqALsgRlrailqnqgn >7d58_ABE: title=CRYO-EM STRUCTURE OF HUMAN RNA POLYMERASE III IN ELONGATING STATE organism=HOMO SAPIENS DNA sequence DG(S1):DC(R70) DA(S2):DT(R69) DC(S3):DG(R68) DG(S4):DC(R67) DA(S5):DT(R66) DA(S6):DT(R65) DT(S7):DA(R64) DT(S8):DA(R63) DT(S9):DA(R62) DG(S10):DC(R61) DC(S11):DG(R60) DG(S12):DC(R59) DT(S13):DA(R58) DG(S14):DC(R57) DT(S15):DA(R56) DC(S16):DG(R55) chainA (1304) ARG1305 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 chainB chainE prot.sequence vkeqfretdvakkishicfgmkspeemrqqahiqvvsknlysqdnqhapllygvldhrmgtsekdrpcetcgknladclghygyidlelpcfhvgyfravigilqmicktcchimlsqeekkqfldylkrpgltylqkrglkkkisdkcrkknichhcgafngtvkkcgllkiihekyktnkkvvdpivsnflqsfetaiehnkevepllgraqenlnplvvlnlfkripaedvplllmnpeagkpsdliltrllvpplcirpsvvsdlksgtneddltmklteiiflndvikkhrisgaktqmimedwdflqlqcalyinselsgiplnmapkkwtrgfvqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlridevavpvhvakiltfpekvnkaninflrklvqngpevhpganfiqqrhtqmkrflkygnrekmaqelkygdiverhlidgdvvlfnrqpslhklsimahlarvkphrtfrfnecvctpynadfdgdemnlhlpqteeakaealvlmgtkanlvtprngepliaaiqdfltgaylltlkdtffdrakacqiiasilvgkdekikvrlppptilkpvtlwtgkqifsvilrpsddnpvranlrtkgkqycgkgedlcandsyvtiqnselmsgsmdkgtlgsgsknnifyillrdwgqneaadamsrlarlapvylsnrgfsigigdvtpgqgllkakyellnagykkcdeyiealntgklqqqpgctaeetlealilkelsvirdhagsaclreldksnspltmalcgskgsfinisqmiacvgqqaisgsrvpdgfenrslphfekhsklpaakgfvansfysgltptefffhtmagreglvdtavktaetgymqrrlvksledlcsqydltvrsstgdiiqfiyggdgldpaamegkdeplefkrvldnikavfpcpsepalsknelilttesimkkseflccqdsflqeikkfikgvsekikktrdkygindngtteprvlyqldritptqvekfletcrdkymraqmepgsavgalcaqsigepgtqmtlktfhfagvasmnitlgvprikeiinaskaistpiitaqldkdddadyarlvkgriektllgeiseyieevflpddcfilvklslerirllrlevnaetvrysictsklrvkpgdvavhgeavvcvtprenskssmyyvlqflkedlpkvvvqgipevsravihideqsgkekykllvegdnlravmathgvkgtrttsnntyevektlgieaarttiineiqytmvnhgmsidrrhvmllsdlmtykgevlgitRfglakmkesvlmlasfektadhlfdaayfgqkdsvcgvseciimgipmnigtglfkllhkadrdpnppkrplifdtnefhipl/piptveekwrllpaflkvkglvkqhidsfnyfinveikkimkanekvtsdadpmwylkylniyvglpdveesfnvtrpvsphecrlrdmtysapitvdieytrgsqriirnalpigrmpimlrssncvltgktpaefaklnecpldpggyfivkgvekviliqeqlsknriiveadrkgavgasvtssthekksrtnmavkqgrfylrhntlsedipiviifkamgvesdqeivqmigteehvmaafgpsleecqkaqiftqmqalkyignkvrrqktkieearellastilthvpvkefnfrakciytavmvrrvilaqgdnkvddrdyygnkrlelagqllsllfedlfkkfnsemkkiadqvipkqraaqfdvvkhmrqdqitngmvnaistgnwslkrfkmdrqgvtqvlsrlsyisalgmmtrissqfektrkvsgprslqpsqwgmlcpsdtpegeacglvknlalmthittdmedgpivklasnlgvedvnllcgeelsypnvflvflngnilgvirdhkklvntfrlmrragyinefvsistnltdrcvyissdggrlcrpyiivkkqkpavtnkhmeelaqgyrnfedflheslveyldvneendcnialyehtinkdtthleiepftllgvcaglipyphhnqsprntyqcamgkqamgtigynqrnridtlmyllaypqkpmvktktieliefeklpagqnatvavmsysgydiedalvlnkasldrgfgrclvyknakctlkrytnqtfdkvmgpmldaatrkpiwrheildadgicspgekvenkqvlvnksmptvqpqykdvpitykgatdsyiekvmissnaedaflikmllrqtrrpeigdkfssrhgqkgvcglivpqedmpfcdsgicpdiimnphgfpsrmtvgkliellagkagvldgrfhygtafggskvkdvcedlvrhgynylgkdyvtsgitgepleayiyfgpvyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcligygasmlllerlmissdafevdvcgqcgllgysgwchycksschvsslripyackllfqelqsmniiprlklskyne/mddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqsgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >7d69_ABCDEFGH:Histone-fold; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING GIARDIA HISTONES organism=GIARDIA INTESTINALIS DNA sequence DT(I1):DA(J125) DC(I2):DG(J124) DC(I3):DG(J123) DC(I4):DG(J122) DG(I5):DC(J121) DG(I6):DC(J120) DT(I7):DA(J119) DG(I8):DC(J118) DC(I9):DG(J117) DC(I10):DG(J116) DG(I11):DC(J115) DA(I12):DT(J114) DG(I13):DC(J113) DG(I14):DC(J112) DC(I15):DG(J111) DC(I16):DG(J110) DG(I17):DC(J109) DC(I18):DG(J108) DT(I19):DA(J107) DC(I20):DG(J106) DA(I21):DT(J105) DA(I22):DT(J104) DT(I23):DA(J103) DT(I24):DA(J102) DG(I25):DC(J101) DG(I26):DC(J100) DT(I27):DA(J99) DC(I28):DG(J98) DG(I29):DC(J97) DT(I30):DA(J96) DA(I31):DT(J95) DG(I32):DC(J94) DA(I33):DT(J93) DC(I34):DG(J92) DA(I35):DT(J91) DG(I36):DC(J90) DC(I37):DG(J89) DT(I38):DA(J88) DC(I39):DG(J87) DT(I40):DA(J86) DA(I41):DT(J85) DG(I42):DC(J84) DC(I43):DG(J83) DA(I44):DT(J82) DC(I45):DG(J81) DC(I46):DG(J80) DG(I47):DC(J79) DC(I48):DG(J78) DT(I49):DA(J77) DT(I50):DA(J76) DA(I51):DT(J75) DA(I52):DT(J74) DA(I53):DT(J73) DC(I54):DG(J72) DG(I55):DC(J71) DC(I56):DG(J70) DA(I57):DT(J69) DC(I58):DG(J68) DG(I59):DC(J67) DT(I60):DA(J66) DA(I61):DT(J65) DC(I62):DG(J64) DG(I63):DC(J63) DG(I64):DC(J62) DA(I65):DT(J61) DA(I66):DT(J60) DT(I67):DA(J59) DC(I68):DG(J58) DC(I69):DG(J57) DG(I70):DC(J56) DT(I71):DA(J55) DA(I72):DT(J54) DC(I73):DG(J53) DG(I74):DC(J52) DT(I75):DA(J51) DG(I76):DC(J50) DC(I77):DG(J49) DG(I78):DC(J48) DT(I79):DA(J47) DT(I80):DA(J46) DT(I81):DA(J45) DA(I82):DT(J44) DA(I83):DT(J43) DG(I84):DC(J42) DC(I85):DG(J41) DG(I86):DC(J40) DG(I87):DC(J39) DT(I88):DA(J38) DG(I89):DC(J37) DC(I90):DG(J36) DT(I91):DA(J35) DA(I92):DT(J34) DG(I93):DC(J33) DA(I94):DT(J32) DG(I95):DC(J31) DC(I96):DG(J30) DT(I97):DA(J29) DG(I98):DC(J28) DT(I99):DA(J27) DC(I100):DG(J26) DT(I101):DA(J25) DA(I102):DT(J24) DC(I103):DG(J23) DG(I104):DC(J22) DA(I105):DT(J21) DC(I106):DG(J20) DC(I107):DG(J19) DA(I108):DT(J18) DA(I109):DT(J17) DT(I110):DA(J16) DT(I111):DA(J15) DG(I112):DC(J14) DA(I113):DT(J13) DG(I114):DC(J12) DC(I115):DG(J11) DG(I116):DC(J10) DG(I117):DC(J9) DC(I118):DG(J8) DC(I119):DG(J7) DT(I120):DA(J6) DC(I121):DG(J5) DG(I122):DC(J4) DG(I123):DC(J3) DC(I124):DG(J2) DA(I125):DT(J1) chainA ( 36) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 12) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainH chainC chainG ( 28) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eikkyqkstdllirklpfsklvrdivtsglsksdiRfqgaavealqesaenyiislfvdtqlcaehakrvtimkpdmelatrigkriepe/dtlggitkpaiRrlarrggvkrisstiyqqtrevlkaflevvlrdsltytehgqrktvtsqdvvyalkrqgrtlygfg/ksrsaragisfPigrihrhlregryaerissdapvylaavlenvvaevfreacnhrdkksqkrivpnhiltalrkdkelatifanvtireggvar/etyatyiykvlRsenirseadtdlgisnkgmevmnslvndlferiaseasnlakiskrntigkkdiesaaklvipgeigrlirdeadkalskftss/kQgmvavkeikkyqkstdllirklpfsklvrdivtsglsksdiRfqgaavealqesaenyiislfvdtqlcaehakrvtimkpdmelatrigkriepey/dTlggitkpairrlarrggvkrisstiyqqtrevlkaflevvlRdsltytehgqrktvtsqdvvyalkrqgrtlygfg/ksrsaragisfpigrihrhlregryaeRissdapvylaavlenvvaevfreacnhrdkksqkrivpnhiltalrkdkelatifanvtireggvar/etyatyiykvlrsenirseadtdlgisNkgmevmnslvndlferiaseasnlakiskrntigkkdiesaaklvipgeigrlirdeadkalskftss >7d69_B:Histone-fold; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING GIARDIA HISTONES organism=GIARDIA INTESTINALIS DNA sequence DT(J1):DA(I125) DG(J2):DC(I124) DC(J3):DG(I123) DC(J4):DG(I122) DG(J5):DC(I121) DA(J6):DT(I120) DG(J7):DC(I119) DG(J8):DC(I118) DC(J9):DG(I117) DC(J10):DG(I116) DG(J11):DC(I115) DC(J12):DG(I114) DT(J13):DA(I113) DC(J14):DG(I112) DA(J15):DT(I111) DA(J16):DT(I110) DT(J17):DA(I109) DT(J18):DA(I108) DG(J19):DC(I107) DG(J20):DC(I106) DT(J21):DA(I105) DC(J22):DG(I104) DG(J23):DC(I103) DT(J24):DA(I102) DA(J25):DT(I101) DG(J26):DC(I100) DA(J27):DT(I99) DC(J28):DG(I98) DA(J29):DT(I97) DG(J30):DC(I96) DC(J31):DG(I95) DT(J32):DA(I94) DC(J33):DG(I93) DT(J34):DA(I92) DA(J35):DT(I91) DG(J36):DC(I90) DC(J37):DG(I89) DA(J38):DT(I88) DC(J39):DG(I87) DC(J40):DG(I86) DG(J41):DC(I85) DC(J42):DG(I84) DT(J43):DA(I83) DT(J44):DA(I82) DA(J45):DT(I81) DA(J46):DT(I80) DA(J47):DT(I79) DC(J48):DG(I78) DG(J49):DC(I77) DC(J50):DG(I76) DA(J51):DT(I75) DC(J52):DG(I74) DG(J53):DC(I73) DT(J54):DA(I72) DA(J55):DT(I71) DC(J56):DG(I70) DG(J57):DC(I69) DG(J58):DC(I68) DA(J59):DT(I67) DT(J60):DA(I66) DT(J61):DA(I65) DC(J62):DG(I64) DC(J63):DG(I63) DG(J64):DC(I62) DT(J65):DA(I61) DA(J66):DT(I60) DC(J67):DG(I59) DG(J68):DC(I58) DT(J69):DA(I57) DG(J70):DC(I56) DC(J71):DG(I55) DG(J72):DC(I54) DT(J73):DA(I53) DT(J74):DA(I52) DT(J75):DA(I51) DA(J76):DT(I50) DA(J77):DT(I49) DG(J78):DC(I48) DC(J79):DG(I47) DG(J80):DC(I46) DG(J81):DC(I45) DT(J82):DA(I44) DG(J83):DC(I43) DC(J84):DG(I42) DT(J85):DA(I41) DA(J86):DT(I40) DG(J87):DC(I39) DA(J88):DT(I38) DG(J89):DC(I37) DC(J90):DG(I36) DT(J91):DA(I35) DG(J92):DC(I34) DT(J93):DA(I33) DC(J94):DG(I32) DT(J95):DA(I31) DA(J96):DT(I30) DC(J97):DG(I29) DG(J98):DC(I28) DA(J99):DT(I27) DC(J100):DG(I26) DC(J101):DG(I25) DA(J102):DT(I24) DA(J103):DT(I23) DT(J104):DA(I22) DT(J105):DA(I21) DG(J106):DC(I20) DA(J107):DT(I19) DG(J108):DC(I18) DC(J109):DG(I17) DG(J110):DC(I16) DG(J111):DC(I15) DC(J112):DG(I14) DC(J113):DG(I13) DT(J114):DA(I12) DC(J115):DG(I11) DG(J116):DC(I10) DG(J117):DC(I9) DC(J118):DG(I8) DA(J119):DT(I7) DC(J120):DG(I6) DC(J121):DG(I5) DG(J122):DC(I4) DG(J123):DC(I3) DG(J124):DC(I2) DA(J125):DT(I1) chainB ( 12) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dtlggitkpaiRrlarrggvkrisstiyqqtrevlkaflevvlrdsltytehgqrktvtsqdvvyalkrqgrtlygfg >7d69_E:Histone-fold; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING GIARDIA HISTONES organism=GIARDIA INTESTINALIS DNA sequence DT(J1):DA(I125) DG(J2):DC(I124) DC(J3):DG(I123) DC(J4):DG(I122) DG(J5):DC(I121) DA(J6):DT(I120) DG(J7):DC(I119) DG(J8):DC(I118) DC(J9):DG(I117) DC(J10):DG(I116) DG(J11):DC(I115) DC(J12):DG(I114) DT(J13):DA(I113) DC(J14):DG(I112) DA(J15):DT(I111) DA(J16):DT(I110) DT(J17):DA(I109) DT(J18):DA(I108) DG(J19):DC(I107) DG(J20):DC(I106) DT(J21):DA(I105) DC(J22):DG(I104) DG(J23):DC(I103) DT(J24):DA(I102) DA(J25):DT(I101) DG(J26):DC(I100) DA(J27):DT(I99) DC(J28):DG(I98) DA(J29):DT(I97) DG(J30):DC(I96) DC(J31):DG(I95) DT(J32):DA(I94) DC(J33):DG(I93) DT(J34):DA(I92) DA(J35):DT(I91) DG(J36):DC(I90) DC(J37):DG(I89) DA(J38):DT(I88) DC(J39):DG(I87) DC(J40):DG(I86) DG(J41):DC(I85) DC(J42):DG(I84) DT(J43):DA(I83) DT(J44):DA(I82) DA(J45):DT(I81) DA(J46):DT(I80) DA(J47):DT(I79) DC(J48):DG(I78) DG(J49):DC(I77) DC(J50):DG(I76) DA(J51):DT(I75) DC(J52):DG(I74) DG(J53):DC(I73) DT(J54):DA(I72) DA(J55):DT(I71) DC(J56):DG(I70) DG(J57):DC(I69) DG(J58):DC(I68) DA(J59):DT(I67) DT(J60):DA(I66) DT(J61):DA(I65) DC(J62):DG(I64) DC(J63):DG(I63) DG(J64):DC(I62) DT(J65):DA(I61) DA(J66):DT(I60) DC(J67):DG(I59) DG(J68):DC(I58) DT(J69):DA(I57) DG(J70):DC(I56) DC(J71):DG(I55) DG(J72):DC(I54) DT(J73):DA(I53) DT(J74):DA(I52) DT(J75):DA(I51) DA(J76):DT(I50) DA(J77):DT(I49) DG(J78):DC(I48) DC(J79):DG(I47) DG(J80):DC(I46) DG(J81):DC(I45) DT(J82):DA(I44) DG(J83):DC(I43) DC(J84):DG(I42) DT(J85):DA(I41) DA(J86):DT(I40) DG(J87):DC(I39) DA(J88):DT(I38) DG(J89):DC(I37) DC(J90):DG(I36) DT(J91):DA(I35) DG(J92):DC(I34) DT(J93):DA(I33) DC(J94):DG(I32) DT(J95):DA(I31) DA(J96):DT(I30) DC(J97):DG(I29) DG(J98):DC(I28) DA(J99):DT(I27) DC(J100):DG(I26) DC(J101):DG(I25) DA(J102):DT(I24) DA(J103):DT(I23) DT(J104):DA(I22) DT(J105):DA(I21) DG(J106):DC(I20) DA(J107):DT(I19) DG(J108):DC(I18) DC(J109):DG(I17) DG(J110):DC(I16) DG(J111):DC(I15) DC(J112):DG(I14) DC(J113):DG(I13) DT(J114):DA(I12) DC(J115):DG(I11) DG(J116):DC(I10) DG(J117):DC(I9) DC(J118):DG(I8) DA(J119):DT(I7) DC(J120):DG(I6) DC(J121):DG(I5) DG(J122):DC(I4) DG(J123):DC(I3) DG(J124):DC(I2) DA(J125):DT(I1) chainE ( 2) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kQgmvavkeikkyqkstdllirklpfsklvrdivtsglsksdiRfqgaavealqesaenyiislfvdtqlcaehakrvtimkpdmelatrigkriepey >7d69_G:Histone-fold; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING GIARDIA HISTONES organism=GIARDIA INTESTINALIS DNA sequence DT(J1):DA(I125) DG(J2):DC(I124) DC(J3):DG(I123) DC(J4):DG(I122) DG(J5):DC(I121) DA(J6):DT(I120) DG(J7):DC(I119) DG(J8):DC(I118) DC(J9):DG(I117) DC(J10):DG(I116) DG(J11):DC(I115) DC(J12):DG(I114) DT(J13):DA(I113) DC(J14):DG(I112) DA(J15):DT(I111) DA(J16):DT(I110) DT(J17):DA(I109) DT(J18):DA(I108) DG(J19):DC(I107) DG(J20):DC(I106) DT(J21):DA(I105) DC(J22):DG(I104) DG(J23):DC(I103) DT(J24):DA(I102) DA(J25):DT(I101) DG(J26):DC(I100) DA(J27):DT(I99) DC(J28):DG(I98) DA(J29):DT(I97) DG(J30):DC(I96) DC(J31):DG(I95) DT(J32):DA(I94) DC(J33):DG(I93) DT(J34):DA(I92) DA(J35):DT(I91) DG(J36):DC(I90) DC(J37):DG(I89) DA(J38):DT(I88) DC(J39):DG(I87) DC(J40):DG(I86) DG(J41):DC(I85) DC(J42):DG(I84) DT(J43):DA(I83) DT(J44):DA(I82) DA(J45):DT(I81) DA(J46):DT(I80) DA(J47):DT(I79) DC(J48):DG(I78) DG(J49):DC(I77) DC(J50):DG(I76) DA(J51):DT(I75) DC(J52):DG(I74) DG(J53):DC(I73) DT(J54):DA(I72) DA(J55):DT(I71) DC(J56):DG(I70) DG(J57):DC(I69) DG(J58):DC(I68) DA(J59):DT(I67) DT(J60):DA(I66) DT(J61):DA(I65) DC(J62):DG(I64) DC(J63):DG(I63) DG(J64):DC(I62) DT(J65):DA(I61) DA(J66):DT(I60) DC(J67):DG(I59) DG(J68):DC(I58) DT(J69):DA(I57) DG(J70):DC(I56) DC(J71):DG(I55) DG(J72):DC(I54) DT(J73):DA(I53) DT(J74):DA(I52) DT(J75):DA(I51) DA(J76):DT(I50) DA(J77):DT(I49) DG(J78):DC(I48) DC(J79):DG(I47) DG(J80):DC(I46) DG(J81):DC(I45) DT(J82):DA(I44) DG(J83):DC(I43) DC(J84):DG(I42) DT(J85):DA(I41) DA(J86):DT(I40) DG(J87):DC(I39) DA(J88):DT(I38) DG(J89):DC(I37) DC(J90):DG(I36) DT(J91):DA(I35) DG(J92):DC(I34) DT(J93):DA(I33) DC(J94):DG(I32) DT(J95):DA(I31) DA(J96):DT(I30) DC(J97):DG(I29) DG(J98):DC(I28) DA(J99):DT(I27) DC(J100):DG(I26) DC(J101):DG(I25) DA(J102):DT(I24) DA(J103):DT(I23) DT(J104):DA(I22) DT(J105):DA(I21) DG(J106):DC(I20) DA(J107):DT(I19) DG(J108):DC(I18) DC(J109):DG(I17) DG(J110):DC(I16) DG(J111):DC(I15) DC(J112):DG(I14) DC(J113):DG(I13) DT(J114):DA(I12) DC(J115):DG(I11) DG(J116):DC(I10) DG(J117):DC(I9) DC(J118):DG(I8) DA(J119):DT(I7) DC(J120):DG(I6) DC(J121):DG(I5) DG(J122):DC(I4) DG(J123):DC(I3) DG(J124):DC(I2) DA(J125):DT(I1) chainG ( 28) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ksrsaragisfpigrihrhlregryaeRissdapvylaavlenvvaevfreacnhrdkksqkrivpnhiltalrkdkelatifanvtireggvar >7d7c_CDF: title=CRYOEM STRUCTURE OF GP55-DEPENDENT RNA POLYMERASE-PROMOTER OPEN COMPLEX organism=ESCHERICHIA COLI / ESCHERICHIA COLI 1-392-07_S4_C3 DNA sequence DA(N24):DT(T31) DG(N25):DC(T30) DT(N26):DT(T29) DA(N27):DC(T28) DT(N28):DA(T27) DA(N29):DT(T26) DA(N30):DA(T25) DA(N31):DT(T24) DG(N38):DT(T23) DA(N39):DT(T22) DT(N40):DA(T13) DA(N41):DT(T12) DC(N42):DG(T11) DT(N43):DA(T10) DG(N44):DC(T9) DA(N45):DT(T8) DA(N46):DT(T7) DG(N47):DC(T6) DC(N48):DG(T5) DA(N49):DT(T4) DG(N50):DC(T3) DC(N51):DG(T2) DC(N52):DG(T1) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) PRO178 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG470 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) GLU477 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (480) LEU481 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (244) ARG259 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) PHE260 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) THR262 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) SER319 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) ASN320 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainF ( 1) TYR10 0 0 0 0 0 0 5 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ASN13 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ILE50 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LEU54 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LYS56 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG57 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ASN59 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE60 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR63 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) THR64 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TRP67 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PHE86 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASP87 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LYS90 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) TYR91 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) HIS95 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) TYR97 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) THR99 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) GLN100 0 0 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ALA101 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ASN104 0 3 8 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) VAL107 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE110 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL117 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) TYR121 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariiPyrgSWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnrrirsvgemaenqfrvglvRveravkErlsLgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRFaTsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/YvnNkellqaiidwktelanvrqndtiglaimlIaegLsKRfNFsgYTqsWkqemiadgieasikglhnFDetKYknpHaYiTQAcfNafVqrIkkerkeVakkYsyfvhnvydsrdddmvalvdetfiqdiydkmt >7d7c_F: title=CRYOEM STRUCTURE OF GP55-DEPENDENT RNA POLYMERASE-PROMOTER OPEN COMPLEX organism=ESCHERICHIA COLI DNA sequence DA(N24):DT(T31) DG(N25):DC(T30) DT(N26):DT(T29) DA(N27):DC(T28) DT(N28):DA(T27) DA(N29):DT(T26) DA(N30):DA(T25) DA(N31):DT(T24) DG(N38):DT(T23) DA(N39):DT(T22) DT(N40):DA(T13) DA(N41):DT(T12) DC(N42):DG(T11) DT(N43):DA(T10) DG(N44):DC(T9) DA(N45):DT(T8) DA(N46):DT(T7) DG(N47):DC(T6) DC(N48):DG(T5) DA(N49):DT(T4) DG(N50):DC(T3) DC(N51):DG(T2) DC(N52):DG(T1) chainF ( 1) TYR10 0 0 0 0 0 0 5 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ASN13 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ILE50 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LEU54 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LYS56 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG57 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ASN59 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE60 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR63 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) THR64 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TRP67 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PHE86 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASP87 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LYS90 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) TYR91 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) HIS95 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) TYR97 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) THR99 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) GLN100 0 0 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ALA101 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ASN104 0 3 8 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) VAL107 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE110 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL117 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) TYR121 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence YvnNkellqaiidwktelanvrqndtiglaimlIaegLsKRfNFsgYTqsWkqemiadgieasikglhnFDetKYknpHaYiTQAcfNafVqrIkkerkeVakkYsyfvhnvydsrdddmvalvdetfiqdiydkmt >7d7d_CDF: title=CRYOEM STRUCTURE OF GP45-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX organism=ESCHERICHIA COLI / ESCHERICHIA COLI 1-392-07_S4_C3 / ESCHERICHIA VIRUS T4 DNA sequence DG(T2):DC(N52) DC(T3):DG(N50) DT(T4):DA(N49) DG(T5):DC(N48) DC(T6):DG(N47) DT(T7):DA(N46) DT(T8):DA(N45) DC(T9):DG(N44) DA(T10):DT(N43) DG(T11):DC(N42) DT(T12):DA(N39) DA(T13):DG(N38) DT(T22):DA(N31) DT(T23):DA(N30) DT(T24):DA(N29) DA(T25):DT(N28) DT(T26):DA(N27) DA(T27):DT(N26) DT(T29):DA(N24) DC(T30):DG(N23) DT(T31):DA(N22) DC(T32):DG(N21) DG(T34):DT(N20) DT(T35):DA(N18) DA(T36):DT(N17) DA(T37):DT(N16) DT(T38):DA(N15) DA(T39):DT(N14) DT(T41):DC(N13) DG(T42):DA(N12) DC(T43):DC(N11) DT(T44):DA(N9) DG(T45):DC(N8) DA(T46):DT(N7) DG(T47):DC(N6) DC(T48):DG(N5) DT(T49):DA(N4) DC(T50):DG(N3) DT(T51):DA(N2) DT(T52):DA(N1) DT(T53):DA(N0) DA(T54):DT(N-1) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (480) LEU481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) PHE260 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 1) TYR10 0 0 0 0 0 0 0 0 0 0 0 0 14 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ASN13 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ILE50 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LEU54 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG57 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ASN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) THR64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TRP67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PHE86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) TYR91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) HIS95 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) TYR97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) THR99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) GLN100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ALA101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ASN104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) VAL107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) TYR121 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgSWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnrrirsvgemaenqfrvglvRveravkerlsLgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRFatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/YvnNkellqaiidwktelanvrqndtiglaimlIaegLskRfNFsgYTqsWkqemiadgieasikglhnFdetKYknpHaYiTQAcfNafVqrikkerkevakkYsyfvhnvydsrdddmvalvdetfiqdiydkmt >7d7d_F: title=CRYOEM STRUCTURE OF GP45-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX organism=? DNA sequence DT(N-1):DA(T54) DA(N0):DT(T53) DA(N1):DT(T52) DA(N2):DT(T51) DG(N3):DC(T50) DA(N4):DT(T49) DG(N5):DC(T48) DC(N6):DG(T47) DT(N7):DA(T46) DC(N8):DG(T45) DA(N9):DT(T44) DC(N11):DC(T43) DA(N12):DG(T42) DC(N13):DT(T41) DT(N14):DA(T39) DA(N15):DT(T38) DT(N16):DA(T37) DT(N17):DA(T36) DA(N18):DT(T35) DT(N20):DG(T34) DG(N21):DC(T32) DA(N22):DT(T31) DG(N23):DC(T30) DA(N24):DT(T29) DT(N26):DA(T27) DA(N27):DT(T26) DT(N28):DA(T25) DA(N29):DT(T24) DA(N30):DT(T23) DA(N31):DT(T22) DG(N38):DA(T13) DA(N39):DT(T12) DC(N42):DG(T11) DT(N43):DA(T10) DG(N44):DC(T9) DA(N45):DT(T8) DA(N46):DT(T7) DG(N47):DC(T6) DC(N48):DG(T5) DA(N49):DT(T4) DG(N50):DC(T3) DC(N52):DG(T2) chainF ( 1) TYR10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 14 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ASN13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ILE50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LEU54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ASN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) PHE60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) THR64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) TRP67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PHE86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) TYR91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) HIS95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) TYR97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) THR99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) GLN100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ALA101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ASN104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) VAL107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) TYR121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence YvnNkellqaiidwktelanvrqndtiglaimlIaegLskRfNFsgYTqsWkqemiadgieasikglhnFdetKYknpHaYiTQAcfNafVqrikkerkevakkYsyfvhnvydsrdddmvalvdetfiqdiydkmt >7d8t_A:Nucleic_acid-binding_proteins;HLH,_helix-loop-helix_DNA-binding_domain; title=MITF BHLHLZ COMPLEX WITH M-BOX DNA organism=HOMO SAPIENS, AQUIFEX AEOLICUS VF5 DNA sequence DT(D1):DG(C16) DG(D2):DC(C14) DT(D3):DA(C13) DA(D4):DT(C12) DA(D5):DT(C11) DC(D6):DG(C10) DA(D7):DT(C9) DT(D8):DA(C8) DG(D9):DC(C7) DT(D10):DA(C6) DG(D11):DC(C5) DT(D12):DA(C4) DC(D13):DG(C3) DC(D14):DG(C2) DC(D15):DG(C1) chainA ( 12) HIS316 0 0 0 0 0 0 0 0 0 2 8 2 0 0 0 ( 13) ASN317 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 16) GLU320 0 0 0 0 0 0 0 0 0 5 10 1 0 0 0 ( 19) ARG323 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 ( 20) ARG324 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 prot.sequence slakerqkkdnHNliErrRRfnindrikelgtlipksndpdmrwnkgtilkasvdyirklqreqqrakelenrqkklehacrhlllriqelgiedflkvdlrvakvlsaervegsekllkltlslgdeertvvagiakyytpeelvgkkivivanlkprkifgiesqgmilaasdgenlsvivpdrdvkegaklsaale >7d8t_AB:Nucleic_acid-binding_proteins;HLH,_helix-loop-helix_DNA-binding_domain; title=MITF BHLHLZ COMPLEX WITH M-BOX DNA organism=HOMO SAPIENS, AQUIFEX AEOLICUS VF5 DNA sequence DT(D1):DG(C16) DG(D2):DC(C14) DT(D3):DA(C13) DA(D4):DT(C12) DA(D5):DT(C11) DC(D6):DG(C10) DA(D7):DT(C9) DT(D8):DA(C8) DG(D9):DC(C7) DT(D10):DA(C6) DG(D11):DC(C5) DT(D12):DA(C4) DC(D13):DG(C3) DC(D14):DG(C2) DC(D15):DG(C1) chainA ( 12) HIS316 0 0 0 0 0 0 0 0 0 2 8 2 0 0 0 ( 13) ASN317 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 16) GLU320 0 0 0 0 0 0 0 0 0 5 10 1 0 0 0 ( 19) ARG323 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 ( 20) ARG324 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 chainB ( 12) HIS316 0 0 0 0 2 5 8 0 0 0 0 0 0 0 0 ( 13) ASN317 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 16) GLU320 0 0 0 0 1 9 4 0 0 0 0 0 0 0 0 ( 19) ARG323 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 ( 20) ARG324 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 prot.sequence slakerqkkdnHNliErrRRfnindrikelgtlipksndpdmrwnkgtilkasvdyirklqreqqrakelenrqkklehacrhlllriqelgiedflkvdlrvakvlsaervegsekllkltlslgdeertvvagiakyytpeelvgkkivivanlkprkifgiesqgmilaasdgenlsvivpdrdvkegaklsaale/slakerqkkdnHNliErrRRfnindrikelgtlipksndpdmrwnkgtilkasvdyirklqreqqrakelenrqkklehacrhlllriqelgiedflkvdlrvakvlsaervegsekllkltlslgdeertvvagiakyytpeelvgkkivivanlkprkifgiesqgmilaasdgenlsvivpdrdvkegaklsaale >7d98_BPQ:Periplasmic_binding_protein-like_II;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FULL-LENGTH CBNR COMPLEXED WITH THE TARGET DNA COMPLEX organism=Cupriavidus necator DNA sequence DG(H1):DC(G55) DC(H2):DG(G54) DC(H3):DG(G53) DA(H4):DT(G52) DT(H5):DA(G51) DG(H6):DC(G50) DC(H7):DG(G49) DC(H8):DG(G48) DG(H9):DC(G47) DT(H10):DA(G46) DC(H11):DG(G45) DC(H12):DG(G44) DA(H13):DT(G43) DA(H14):DT(G42) DT(H15):DA(G41) DA(H16):DT(G40) DT(H44):DG(G39) DG(H45):DG(G38) DC(H46):DT(G37) DG(H47):DG(G17) DT(H48):DC(G16) DA(H49):DC(G15) DA(H50):DA(G14) chainB ( 28) SER28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 30) PRO30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 chainP ( 30) PRO30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 ( 31) PRO31 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 chainQ ( 28) SER28 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) PRO30 0 0 0 1 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) PRO31 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) THR33 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) HIS52 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mefrqlkyfiavaeagnmaaaakrlhvSqPpitrqmqaleadlgvvlleraghafledarrilelagrsgdrsraaargdvgelsvayfgtpiyrslplllrafltstptatvslthmtkdeqvegllagtihvgfsrffprhpgieivniaqedlylavhrsqsgkfgktckladlraveltlfprggrpsfadeviglfkhagiepriarvvedataalaltmagaassivpasvaairwpdiafarivrvkvpiscifrkekqppilarfvehvrrsakd/mefrqlkyfiavaeagnmaaaakrlhvsqPPitrqmqaleadlgvvllerieltaaghafledarrilelagrsgdrsraaargdvgelsvayfgtpiyrslplllrafltstptatvslthmtkdeqvegllagtihvgfsrffprhpgieivniaqedlylavhrsqsgkfgktckladlraveltlfprggrpsfadeviglfkhagiepriarvvedataalaltmagaassivpasvaairwpdiafarivgtrvkvpiscifrkekqppilarfvehvrrsa/mefrqlkyfiavaeagnmaaaakrlhvSqPPiTrqmqaleadlgvvllersHrgieltaaghafledarrilelagrsgdrsraaargdvgelsvayfgtpiyrslplllrafltstptatvslthmtkdeqvegllagtihvgfsrffprhpgieivniaqedlylavhrsqsgkfgktckladlraveltlfpsfadeviglfkhagiepriarvvedataalaltmagaassivpasvaairwpdiafarivgtrvkvpiscifrkekqppilarfvehvrrsak >7d98_Q:Periplasmic_binding_protein-like_II;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF FULL-LENGTH CBNR COMPLEXED WITH THE TARGET DNA COMPLEX organism=Cupriavidus necator DNA sequence DA(G14):DA(H50) DC(G15):DA(H49) DC(G16):DT(H48) DG(G17):DG(H47) DT(G37):DC(H46) DG(G38):DG(H45) DG(G39):DT(H44) DT(G40):DA(H16) DA(G41):DT(H15) DT(G42):DA(H14) DT(G43):DA(H13) DG(G44):DC(H12) DG(G45):DC(H11) DA(G46):DT(H10) DC(G47):DG(H9) DG(G48):DC(H8) DG(G49):DC(H7) DC(G50):DG(H6) DA(G51):DT(H5) DT(G52):DA(H4) DG(G53):DC(H3) DG(G54):DC(H2) DC(G55):DG(H1) chainQ ( 28) SER28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 30) PRO30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 1 0 0 0 ( 31) PRO31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 33) THR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 52) HIS52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 prot.sequence mefrqlkyfiavaeagnmaaaakrlhvSqPPiTrqmqaleadlgvvllersHrgieltaaghafledarrilelagrsgdrsraaargdvgelsvayfgtpiyrslplllrafltstptatvslthmtkdeqvegllagtihvgfsrffprhpgieivniaqedlylavhrsqsgkfgktckladlraveltlfpsfadeviglfkhagiepriarvvedataalaltmagaassivpasvaairwpdiafarivgtrvkvpiscifrkekqppilarfvehvrrsak >7dbh_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE MOUSE NUCLEOSOME STRUCTURE CONTAINING H3MM18 organism=MUS MUSCULUS DNA sequence DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) chainA chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE chainF chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence qkssellirklpfqrlvleiaqdfktdlcfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdtqlagyicr/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/trssraglqfpvgrvhrllrkgnysErvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlp/rkesysiyvykvlkqvhpdtgisskAmgimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytss/lreirsyqkssellirklpfqrlvlEiaqdfktdlcfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdtqlagyicr/niqgitkpairrlarrggvkrisglIyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlp/grkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytss >7dbm_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE MUTANT Q151M/Y115F/F116Y/M184V:DNA:DGTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 / HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(E-1) DC(E0) DG(E1):DC(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainA ( 23) TRP24 55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PHE61 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ILE63 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LEU74 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ASP76 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG78 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ILE94 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) PRO157 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TYR183 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) VAL184 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) ASN265 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (447) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 chainB (245) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 (325) PHE346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence ispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfrkqnpdiviyqYVddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnqktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnWasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepFknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >7dbm_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE MUTANT Q151M/Y115F/F116Y/M184V:DNA:DGTP TERNARY COMPLEX organism=? DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DC(F0) DG(F1):DC(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 23) TRP24 0 0 0 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PHE61 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LEU74 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ASP76 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG78 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ILE94 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) PRO157 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TYR183 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) VAL184 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (474) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (500) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 prot.sequence ispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfrkqnpdiviyqYVddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanretklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs >7dbm_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE MUTANT Q151M/Y115F/F116Y/M184V:DNA:DGTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 / HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DC(F0) DG(F1):DC(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 23) TRP24 0 0 0 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) PHE61 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LEU74 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ASP76 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG78 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ILE94 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) PRO157 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TYR183 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) VAL184 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (474) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (500) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 chainD prot.sequence ispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpmgwkgsPaifqssmtkilepfrkqnpdiviyqYVddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanretklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwplTeekikalveictemekegkiskigpenpyntpvfaiKkkdstkwrklvdFrElNkrtqdfwevqlgiphPaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfrkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrGtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >7dbn_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE MUTANT Q151M/Y115F/F116Y/M184V/F160M:DNA:DCTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 / HUMAN IMMUNODEFICIENCY VIRUS 1 DNA sequence DT(E-1) DG(E0) DC(E1):DG(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainA ( 24) TRP24 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) MET151 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 chainB (245) TRP266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (248) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 (325) PHE346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpMgwkgsPaimqssmtkilepfrkqnpdiviyqYvddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnqktelqaihlalqdsglevnivtdsqyalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnWasQiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepFknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >7dbn_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE MUTANT Q151M/Y115F/F116Y/M184V/F160M:DNA:DCTP TERNARY COMPLEX organism=? DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DG(F0) DC(F1):DG(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 24) TRP24 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP76 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) MET151 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (501) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpMgwkgsPaimqssmtkilepfrkqnpdiviyqYvddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs >7dbn_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE MUTANT Q151M/Y115F/F116Y/M184V/F160M:DNA:DCTP TERNARY COMPLEX organism=HUMAN IMMUNODEFICIENCY VIRUS 1 / HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(F-4) DA(F-3) DA(F-2) DT(F-1) DG(F0) DC(F1):DG(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 24) TRP24 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PHE61 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP76 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) MET151 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (501) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqWplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvDfRelnkrtqdfwevqlgIphpaglkqkksvtvldvgdafysvpldkdfrkytaftipsinnetpgiryqynvlpMgwkgsPaimqssmtkilepfrkqnpdiviyqYvddlyvgsdleigqhrtkieelrqhllrwgfttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiyagikvrqlskllrgtkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwyqlekepiigaetfyvdgaanRetklgkagyvtdrgrqkvvpltdttnQktelqaihlalqdsglevnivtdsqYalgiiqaqpdkseselvsqiieqlikkekvylawvpahkgiggneqvdklvs/ietvpvklkpgmdgpkvkqwpltEekikalveictemekegkiskigpenpyntpvfaikKkdstkwrklvdfReLnKrtqdfwevqlgiphpAglkqkksvtvldvgdayfsvpldkdfrkytaftipsinnetpgiryqynvlpqgwkGspaifQssmtkilepfrkqnpdiviyqymddLyvgsdleigqhrtkieelrqhllrwggyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiyagikvrqlskllrgTkaltevvplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmkgahtndvkqlteavqkiatesiviwgktpkfklpiqketweawwteywqatwipewefvntpplvklwy >7dbp_A:Histone-fold; title=LINKER HISTONE DEFINES STRUCTURE AND SELF-ASSOCIATION BEHAVIOUR OF THE 177 BP HUMAN CHROMOSOME organism=HOMO SAPIENS DNA sequence DT(J-86):DA(I86) DT(J-85):DA(I85) DC(J-84):DG(I84) DA(J-83):DT(I83) DA(J-82):DT(I82) DT(J-81):DA(I81) DA(J-80):DT(I80) DC(J-79):DG(I79) DA(J-78):DT(I78) DT(J-77):DA(I77) DG(J-76):DC(I76) DC(J-75):DG(I75) DA(J-74):DT(I74) DC(J-73):DG(I73) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DG(J-67):DC(I67) DA(J-65):DA(I66) DT(J-64):DT(I65) DA(J-63):DA(I64) DT(J-62):DT(I63) DA(J-61):DA(I62) DT(J-60):DT(I61) DC(J-59):DA(I60) DT(J-58):DG(I59) DG(J-57):DC(I57) DA(J-56):DT(I56) DC(J-55):DG(I55) DA(J-54):DT(I54) DC(J-53):DG(I53) DG(J-52):DC(I52) DT(J-51):DA(I51) DG(J-50):DC(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DG(J-46):DC(I46) DG(J-45):DC(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DA(J-42):DT(I42) DC(J-41):DG(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DG(J-38):DC(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DT(J-33):DA(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DT(J-30):DA(I30) DC(J-29):DG(I29) DC(J-28):DG(I28) DC(J-26):DG(I26) DT(J-25):DA(I25) DT(J-24):DA(I24) DG(J-23):DC(I23) DG(J-22):DC(I22) DC(J-21):DG(I21) DG(J-20):DC(I20) DG(J-19):DC(I19) DT(J-18):DA(I18) DT(J-17):DA(I17) DA(J-16):DT(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DG(J-9):DC(I9) DG(J-8):DC(I8) DG(J-6):DC(I7) DG(J-5):DC(I6) DA(J-4):DT(I4) DC(J-3):DG(I3) DA(J-2):DT(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DG(J1):DC(I-1) DC(J2):DG(I-2) DG(J3):DC(I-3) DT(J4):DA(I-4) DA(J5):DT(I-5) DC(J6):DG(I-6) DG(J7):DC(I-7) DT(J8):DA(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DA(J15):DT(I-15) DA(J16):DT(I-16) DG(J17):DC(I-17) DC(J18):DG(I-18) DG(J19):DC(I-19) DG(J20):DC(I-20) DT(J21):DA(I-21) DG(J22):DC(I-22) DC(J23):DG(I-23) DT(J24):DA(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DA(J27):DT(I-27) DG(J28):DC(I-28) DC(J29):DG(I-29) DT(J30):DA(I-30) DG(J31):DC(I-31) DT(J32):DA(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DA(J35):DT(I-35) DC(J36):DG(I-36) DG(J37):DC(I-37) DA(J38):DT(I-38) DC(J39):DG(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DA(J42):DT(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DG(J45):DC(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DC(J48):DG(I-48) DG(J49):DC(I-49) DG(J50):DC(I-50) DC(J51):DG(I-51) DT(J53):DG(I-52) DC(J54):DG(I-54) DG(J55):DC(I-55) DG(J56):DC(I-56) DC(J57):DG(I-57) DA(J58):DT(I-58) DC(J59):DG(I-59) DC(J60):DG(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DA(J64):DT(I-64) DT(J65):DA(I-65) DT(J66):DA(I-66) DC(J67):DG(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DG(J72):DT(I-71) DG(J74):DC(I-73) DC(J75):DG(I-75) DG(J76):DC(I-76) DG(J77):DC(I-77) DC(J78):DG(I-78) DC(J79):DG(I-79) DC(J81):DC(I-80) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >7dci_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HSF2 DNA-BINDING DOMAIN IN COMPLEX WITH 2-SITE HSE DNA IN THE HEAD-TO-HEAD ORIENTATION organism=HOMO SAPIENS DNA sequence DG(B1) DG(B2) DG(B3) DA(B4) DA(B5) DT(B6) DA(B7) DT(B8) DT(B9) DC(B10) DC(B11) DC(B12) chainA ( 57) ARG63 0 24 12 2 0 0 0 0 0 0 0 0 ( 60) ASN66 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfkhnnmasfvRqlNmygfrkvvngpvefqhpyfkqgqddllenikrk >7dcj_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 2-SITE HSE DNA IN THE HEAD-TO-HEAD ORIENTATION organism=HOMO SAPIENS DNA sequence DG(C1):DC(D14) DC(C2):DG(D13) DC(C3):DG(D12) DG(C4):DC(D11) DA(C5):DT(D10) DA(C6):DT(D9) DT(C7):DA(D8) DA(C8):DT(D7) DT(C9):DA(D6) DT(C10):DA(D5) DC(C11):DG(D4) DG(C12):DC(D3) DG(C13):DC(D2) chainA ( 54) SER68 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 57) ARG71 0 0 23 16 9 0 0 0 0 0 0 0 0 ( 58) GLN72 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 60) ASN74 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 61) MET75 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 93) ARG117 0 0 0 0 0 0 4 10 0 0 0 0 0 prot.sequence vpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNMygfrkvverddtefqhpcflrgqeqllenikRk >7dcj_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 2-SITE HSE DNA IN THE HEAD-TO-HEAD ORIENTATION organism=HOMO SAPIENS DNA sequence DC(D2):DG(C13) DC(D3):DG(C12) DG(D4):DC(C11) DA(D5):DT(C10) DA(D6):DT(C9) DT(D7):DA(C8) DA(D8):DT(C7) DT(D9):DA(C6) DT(D10):DA(C5) DC(D11):DG(C4) DG(D12):DC(C3) DG(D13):DC(C2) DC(D14):DG(C1) chainA ( 54) SER68 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 57) ARG71 0 0 0 0 0 0 0 0 9 16 23 0 0 ( 58) GLN72 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 60) ASN74 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 61) MET75 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 93) ARG117 0 0 0 0 0 10 4 0 0 0 0 0 0 chainB ( 61) SER68 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 64) ARG71 0 19 15 8 0 0 0 0 0 0 0 0 0 ( 65) GLN72 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 67) ASN74 1 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG117 0 0 0 0 2 7 5 0 0 0 0 0 0 (110) THR120 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence vpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNMygfrkvverddtefqhpcflrgqeqllenikRk/ghhhhhhvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNmygfrkvvhieqgglvkpdtefqhpcflrgqeqllenikRkvT >7dcs_ABC:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (23 BP) organism=HOMO SAPIENS DNA sequence DG(G1):DC(H22) DG(G2):DC(H21) DC(G3):DG(H20) DG(G4):DC(H19) DT(G5):DA(H18) DT(G6):DA(H17) DC(G7):DG(H16) DT(G8):DA(H15) DA(G9):DT(H14) DG(G10):DC(H13) DA(G11):DT(H12) DA(G12):DT(H11) DT(G13):DA(H10) DA(G14):DT(H9) DT(G15):DA(H8) DT(G16):DA(H7) DC(G17):DG(H6) DG(G18):DC(H5) DC(G19):DG(H4) DG(G20):DC(H3) DG(G21):DC(H2) DA(G22):DT(H1) chainA ( 55) SER68 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 57) VAL70 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG71 0 0 0 0 0 0 0 0 23 17 6 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLN72 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 61) ASN74 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG117 0 0 0 0 0 0 0 0 0 0 0 1 6 4 0 0 0 0 0 0 0 0 chainB ( 55) SER68 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) VAL70 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG71 0 0 0 0 0 8 16 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLN72 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ASN74 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ARG117 0 0 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 55) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 58) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 15 21 0 0 0 0 ( 59) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 61) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 ( 92) ARG117 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 prot.sequence hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhddtefqhpcflrgqeqllenikRkv/hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhieqgglvddtefqhpcflrgqeqllenikRkv/hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNmygfrkvvhdtefqhpcflrgqeqllenikRkv >7dcs_D:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (23 BP) organism=? DNA sequence DT(J1):DA(I22) DC(J2):DG(I21) DC(J3):DG(I20) DG(J4):DC(I19) DC(J5):DG(I18) DG(J6):DC(I17) DA(J7):DT(I16) DA(J8):DT(I15) DT(J9):DA(I14) DA(J10):DT(I13) DT(J11):DA(I12) DT(J12):DA(I11) DC(J13):DG(I10) DT(J14):DA(I9) DA(J15):DT(I8) DG(J16):DC(I7) DA(J17):DT(I6) DA(J18):DT(I5) DC(J19):DG(I4) DG(J20):DC(I3) chainD ( 55) SER68 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 57) VAL70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 58) ARG71 0 0 0 0 0 0 0 0 0 0 0 8 16 24 0 0 0 0 0 0 ( 59) GLN72 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 61) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 93) ARG117 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 prot.sequence hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhidtefqhpcflrgqeqllenikRkv >7dcs_DEF:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (23 BP) organism=HOMO SAPIENS DNA sequence DT(J1):DA(I22) DC(J2):DG(I21) DC(J3):DG(I20) DG(J4):DC(I19) DC(J5):DG(I18) DG(J6):DC(I17) DA(J7):DT(I16) DA(J8):DT(I15) DT(J9):DA(I14) DA(J10):DT(I13) DT(J11):DA(I12) DT(J12):DA(I11) DC(J13):DG(I10) DT(J14):DA(I9) DA(J15):DT(I8) DG(J16):DC(I7) DA(J17):DT(I6) DA(J18):DT(I5) DC(J19):DG(I4) DG(J20):DC(I3) chainD ( 55) SER68 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 57) VAL70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 58) ARG71 0 0 0 0 0 0 0 0 0 0 0 8 16 24 0 0 0 0 0 0 ( 59) GLN72 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 61) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 93) ARG117 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 chainE ( 54) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 56) VAL70 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 57) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 16 9 0 0 0 ( 58) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 60) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 61) MET75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (103) ARG117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 chainF ( 54) SER68 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG71 0 0 0 0 21 16 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLN72 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ASN74 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ARG117 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 prot.sequence hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhidtefqhpcflrgqeqllenikRkv/vpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNMygfrkvvhieqgglvkperddtefqhpcflrgqeqllenikRkv/vpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNmygfrkvvhdtefqhpcflrgqeqllenikRkv >7dct_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (24 BP) organism=? DNA sequence DC(H1):DG(G23) DT(H2):DA(G22) DC(H3):DG(G21) DG(H4):DC(G20) DC(H5):DG(G19) DG(H6):DC(G18) DA(H7):DT(G17) DA(H8):DT(G16) DT(H9):DA(G15) DA(H10):DT(G14) DT(H11):DA(G13) DT(H12):DA(G12) DC(H13):DG(G11) DT(H14):DA(G10) DA(H15):DT(G9) DG(H16):DC(G8) DA(H17):DT(G7) DA(H18):DT(G6) DC(H19):DG(G5) DG(H20):DC(G4) DC(H21):DG(G3) DA(H22):DT(G2) DC(H23):DG(G1) chainA ( 55) SER68 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 57) VAL70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 58) ARG71 0 0 0 0 0 0 0 0 0 0 0 6 15 22 0 0 0 0 0 0 0 0 0 ( 59) GLN72 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 92) ARG117 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhdtefqhpcflrgqeqllenikRkv >7dct_ABC:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (24 BP) organism=HOMO SAPIENS DNA sequence DC(H1):DG(G23) DT(H2):DA(G22) DC(H3):DG(G21) DG(H4):DC(G20) DC(H5):DG(G19) DG(H6):DC(G18) DA(H7):DT(G17) DA(H8):DT(G16) DT(H9):DA(G15) DA(H10):DT(G14) DT(H11):DA(G13) DT(H12):DA(G12) DC(H13):DG(G11) DT(H14):DA(G10) DA(H15):DT(G9) DG(H16):DC(G8) DA(H17):DT(G7) DA(H18):DT(G6) DC(H19):DG(G5) DG(H20):DC(G4) DC(H21):DG(G3) DA(H22):DT(G2) DC(H23):DG(G1) chainA ( 55) SER68 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 57) VAL70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 58) ARG71 0 0 0 0 0 0 0 0 0 0 0 6 15 22 0 0 0 0 0 0 0 0 0 ( 59) GLN72 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 92) ARG117 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 55) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 57) VAL70 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 58) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 15 5 0 0 0 0 0 0 ( 59) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 61) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (100) ARG117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 3 0 0 0 chainC ( 55) SER68 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG71 0 0 0 0 21 15 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLN72 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ASN74 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG117 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhdtefqhpcflrgqeqllenikRkv/hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhieqgglvddtefqhpcflrgqeqllenikRkv/hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNmygfrkvvddtefqhpcflrgqeqllenikRkv >7dct_DEF:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (24 BP) organism=HOMO SAPIENS DNA sequence DC(J1):DG(I23) DT(J2):DA(I22) DC(J3):DG(I21) DG(J4):DC(I20) DC(J5):DG(I19) DG(J6):DC(I18) DA(J7):DT(I17) DA(J8):DT(I16) DT(J9):DA(I15) DA(J10):DT(I14) DT(J11):DA(I13) DT(J12):DA(I12) DC(J13):DG(I11) DT(J14):DA(I10) DA(J15):DT(I9) DG(J16):DC(I8) DA(J17):DT(I7) DA(J18):DT(I6) DC(J19):DG(I5) DG(J20):DC(I4) DC(J21):DG(I3) DA(J22):DT(I2) DC(J23):DG(I1) chainD ( 56) SER68 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 58) VAL70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 59) ARG71 0 0 0 0 0 0 0 0 0 0 0 8 18 22 0 0 0 0 0 0 0 0 0 ( 60) GLN72 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 95) ARG117 0 0 0 0 0 0 0 0 2 7 2 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 54) SER68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 56) VAL70 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 57) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 15 8 0 0 0 0 0 0 ( 58) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 60) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (101) ARG117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 chainF ( 55) SER68 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG71 0 0 0 0 18 14 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) GLN72 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ASN74 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ARG117 0 0 0 0 0 0 0 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hhvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhiddtefqhpcflrgqeqllenikRkv/vpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhieqgglvkpddtefqhpcflrgqeqllenikRkv/hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNmygfrkvvdtefqhpcflrgqeqllenikRkv >7dcu_ABC:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HSF2 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (21 BP) organism=HOMO SAPIENS DNA sequence DG(D1):DC(E20) DC(D2):DG(E19) DG(D3):DC(E18) DT(D4):DA(E17) DT(D5):DA(E16) DC(D6):DG(E15) DT(D7):DA(E14) DA(D8):DT(E13) DG(D9):DC(E12) DA(D10):DT(E11) DA(D11):DT(E10) DT(D12):DA(E9) DA(D13):DT(E8) DT(D14):DA(E7) DT(D15):DA(E6) DC(D16):DG(E5) DG(D17):DC(E4) DC(D18):DG(E3) DG(D19):DC(E2) DG(D20):DC(E1) chainA ( 60) SER60 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 62) VAL62 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG63 0 0 0 0 0 0 0 23 16 8 0 0 0 0 0 0 0 0 0 0 ( 64) GLN64 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 66) ASN66 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) MET67 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 98) ARG109 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 (101) SER112 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainB ( 54) SER60 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) VAL62 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG63 0 0 0 0 8 14 23 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLN64 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ASN66 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ARG109 0 3 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 54) SER60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 57) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 15 17 0 0 0 ( 58) GLN64 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 90) ARG109 0 0 0 0 0 0 0 0 0 0 0 4 7 1 0 0 0 0 0 0 prot.sequence hhhhhhvpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfkhnnmaSfVRQlNMygfrkvvdgpvefqhpyfkqgqddllenikRkvS/vpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfkhnnmaSfVRQlNmygfrkvvhidsgirdgpvefqhpyfkqgqddllenikRkvS/vpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfkhnnmaSfvRQlnmygfrkvvpvefqhpyfkqgqddllenikRkv >7dcu_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HSF2 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (21 BP) organism=HOMO SAPIENS DNA sequence DG(D1):DC(E20) DC(D2):DG(E19) DG(D3):DC(E18) DT(D4):DA(E17) DT(D5):DA(E16) DC(D6):DG(E15) DT(D7):DA(E14) DA(D8):DT(E13) DG(D9):DC(E12) DA(D10):DT(E11) DA(D11):DT(E10) DT(D12):DA(E9) DA(D13):DT(E8) DT(D14):DA(E7) DT(D15):DA(E6) DC(D16):DG(E5) DG(D17):DC(E4) DC(D18):DG(E3) DG(D19):DC(E2) DG(D20):DC(E1) chainC ( 54) SER60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 57) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 15 17 0 0 0 ( 58) GLN64 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 90) ARG109 0 0 0 0 0 0 0 0 0 0 0 4 7 1 0 0 0 0 0 0 prot.sequence vpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfkhnnmaSfvRQlnmygfrkvvpvefqhpyfkqgqddllenikRkv >7dpe_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=RNA METHYLTRANSFERASE METTL4 organism=Arabidopsis thaliana DNA sequence DG(B1) DC(B2) DC(B3) DG(B4) DC(B5) DG(B6) DT(B7) DG(B8) DA(B9) DT(B10) DC(B11) DA(B12) DC(B13) DG(B14) DC(B15) DG(B16) DG(B17) DC(B18) chainA (209) LYS280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 1 prot.sequence ktdklaqfldsgiyesdefnwffldtvritnrsytrfkvspsayysrlrhqearlflskahesflkeiellsddevsfielggvwqapfyeitlsfncneqrvfqvfnnlvvneigeeveaefsnrryimprnscfymsdlhhirnlvpakseegynlividppwenasahqkskyptlpnqyflslpikqlahaegalvalwvtnreKllsfvekelfpawgikyvatmywlkvkpdgtlicdldlvhhkpyeylllgyhftelarsdfklldknqiimsipgdfsrkppigdillkhtpgsqparclelfaremaagwtswgneplhfqdsryf >7dta_A: title=SOLUTION STRUCTURE OF THE C-CLAMP DOMAIN FROM HUMAN HDBP1 IN COMPLEX WITH DNA organism=HOMO SAPIENS DNA sequence DG(C12):DC(B11) DT(C13):DA(B10) DC(C14):DG(B9) DC(C15):DG(B8) DC(C16):DG(B7) DG(C17):DC(B6) DG(C18):DC(B5) DC(C19):DG(B4) DA(C20):DT(B3) DT(C21):DA(B2) DA(C22):DT(B1) chainA ( 7) ARG361 0 0 0 0 0 0 0 8 6 0 0 ( 24) TRP378 0 1 15 13 0 0 0 0 0 0 0 ( 25) LYS379 0 0 0 0 14 12 11 0 0 0 0 ( 26) LYS380 0 0 0 6 6 1 0 0 0 0 0 prot.sequence gdakkcRkvygmerrdlwctacrWKKacqrfld >7du2_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE III EC COMPLEX IN POST-TRANSLOCATION STATE organism=? DNA sequence DT(Y1):DA(X42) DT(Y2):DA(X41) DC(Y3):DG(X40) DC(Y4):DG(X39) DG(Y5):DC(X38) DA(Y6):DT(X37) DG(Y7):DC(X36) DA(Y8):DT(X35) DT(Y9):DA(X34) DC(Y10):DG(X33) DA(Y11):DT(X32) DG(Y12):DC(X31) DA(Y13):DT(X30) DC(Y14):DG(X29) chainA (1222) ARG1305 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence eqfretdvakkishicfgmkspeemrqqahiqvvsknlysqdnqhapllygvldhrmgtsekdrpcetcgknladclghygyidlelpcfhvgyfravigilqmicktcchimlsqeekkqfldylkrpgltylqkrglkkkisdkcrkknichhcgafngtvkkcgllkiiheaqenlnplvvlnlfkripaedvplllmnpeagkpsdliltrllvpplcirpdltmklteiiflndvikkhrisgaktqmimedwdflqlqcalyinselwtrgfvqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlridevavpvhvakiltfpekvnkaninflrklvqngpevhpganfiqqrhtqmkrflkygnrekmaqelkygdiverhlidgdvvlfnrqpslhklsimahlarvkphrtfrfnecvctpynadfdgdemnlhlpqteeakaealvlmgtkanlvtprngepliaaiqdfltgaylltlkdtffdrakacqiiasilvgkdekikvrlppptilkpvtlwtgkqifsvilrpsddnpvranlrtkgkqycgkgedlcandsyvtiqnselmsgsmdkgtlgsgsknnifyillrdwgqneaadamsrlarlapvylsnrgfsigigdvtpgqgllkakyellnagykkcdeyiealntgklqqqpgctaeetlealilkelsvirdhagsaclreldksnspltmalcgskgsfinisqmiacvgqqaisgsrvpdgfenrslphfekhsklpaakgfvansfysgltptefffhtmagreglvdtavktaetgymqrrlvksledlcsqydltvrsstgdiiqfiyggdgldpaamegkdeplefkrvldnikavfpcpsepalsknelilttesimkkseflccqdsflqeikkfikgvsekikktrdkygindngtteprvlyqldritptqvekfletcrdkymraqmepgsavgalcaqsigepgtqmnitlgvprikeiinaskaistpiitaqldkdddadyarlvkgriektllgeiseyieevflpddcfilvklslerirllrlevnaetvrysictsklrvkpgdvavhgeavvcvtprenskssmyyvlqflkedlpkvvvqgipevsravihikykllvegdnlravmathgvkgtrttsnntyevektlgieaarttiineiqytmvnhgmsidrrhvmllsdlmtykgevlgitRfglakmkesvlmlasfektadhlfdaayfgqkdsvcgvseciimgipmnigtglfkllhkadrdpnppkrp >7du2_AE: title=RNA POLYMERASE III EC COMPLEX IN POST-TRANSLOCATION STATE organism=HOMO SAPIENS DNA sequence DG(X29):DC(Y14) DT(X30):DA(Y13) DC(X31):DG(Y12) DT(X32):DA(Y11) DG(X33):DC(Y10) DA(X34):DT(Y9) DT(X35):DA(Y8) DC(X36):DG(Y7) DT(X37):DA(Y6) DC(X38):DG(Y5) DG(X39):DC(Y4) DG(X40):DC(Y3) DA(X41):DT(Y2) DA(X42):DT(Y1) chainA (1222) ARG1305 0 0 2 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence eqfretdvakkishicfgmkspeemrqqahiqvvsknlysqdnqhapllygvldhrmgtsekdrpcetcgknladclghygyidlelpcfhvgyfravigilqmicktcchimlsqeekkqfldylkrpgltylqkrglkkkisdkcrkknichhcgafngtvkkcgllkiiheaqenlnplvvlnlfkripaedvplllmnpeagkpsdliltrllvpplcirpdltmklteiiflndvikkhrisgaktqmimedwdflqlqcalyinselwtrgfvqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlridevavpvhvakiltfpekvnkaninflrklvqngpevhpganfiqqrhtqmkrflkygnrekmaqelkygdiverhlidgdvvlfnrqpslhklsimahlarvkphrtfrfnecvctpynadfdgdemnlhlpqteeakaealvlmgtkanlvtprngepliaaiqdfltgaylltlkdtffdrakacqiiasilvgkdekikvrlppptilkpvtlwtgkqifsvilrpsddnpvranlrtkgkqycgkgedlcandsyvtiqnselmsgsmdkgtlgsgsknnifyillrdwgqneaadamsrlarlapvylsnrgfsigigdvtpgqgllkakyellnagykkcdeyiealntgklqqqpgctaeetlealilkelsvirdhagsaclreldksnspltmalcgskgsfinisqmiacvgqqaisgsrvpdgfenrslphfekhsklpaakgfvansfysgltptefffhtmagreglvdtavktaetgymqrrlvksledlcsqydltvrsstgdiiqfiyggdgldpaamegkdeplefkrvldnikavfpcpsepalsknelilttesimkkseflccqdsflqeikkfikgvsekikktrdkygindngtteprvlyqldritptqvekfletcrdkymraqmepgsavgalcaqsigepgtqmnitlgvprikeiinaskaistpiitaqldkdddadyarlvkgriektllgeiseyieevflpddcfilvklslerirllrlevnaetvrysictsklrvkpgdvavhgeavvcvtprenskssmyyvlqflkedlpkvvvqgipevsravihikykllvegdnlravmathgvkgtrttsnntyevektlgieaarttiineiqytmvnhgmsidrrhvmllsdlmtykgevlgitRfglakmkesvlmlasfektadhlfdaayfgqkdsvcgvseciimgipmnigtglfkllhkadrdpnppkrp/etyrlwkirktimqlchdrgylvtqdeldqtleefkaqsgdkpstdltvlvahnqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >7dv2_A: title=STRUCTURE OF SULFOLOBUS SOLFATARICUS SEGB-DNA COMPLEX organism=? DNA sequence DC(F1):DG(E20) DA(F2):DT(E19) DG(F3):DC(E18) DT(F4):DA(E17) DC(F5):DG(E16) DT(F6):DA(E15) DA(F7):DT(E14) DG(F8):DC(E13) DA(F9):DT(E12) DC(F10):DG(E11) DT(F11):DA(E10) DC(F12):DG(E9) DT(F13):DA(E8) DT(F14):DA(E7) DC(F15):DG(E6) DT(F16):DA(E5) DA(F17):DT(E4) DC(F18):DG(E3) DG(F19):DC(E2) chainA ( 19) LYS52 0 0 0 2 10 9 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) TRP56 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 ( 44) SER77 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence neeekikndmlkyiekdpKigvWsypaflvlqylyhtvpgfkmSrtakealekglkemyptlftiaekiakerfke >7dv2_ABCD: title=STRUCTURE OF SULFOLOBUS SOLFATARICUS SEGB-DNA COMPLEX organism=? DNA sequence DC(F1):DG(E20) DA(F2):DT(E19) DG(F3):DC(E18) DT(F4):DA(E17) DC(F5):DG(E16) DT(F6):DA(E15) DA(F7):DT(E14) DG(F8):DC(E13) DA(F9):DT(E12) DC(F10):DG(E11) DT(F11):DA(E10) DC(F12):DG(E9) DT(F13):DA(E8) DT(F14):DA(E7) DC(F15):DG(E6) DT(F16):DA(E5) DA(F17):DT(E4) DC(F18):DG(E3) DG(F19):DC(E2) chainA ( 19) LYS52 0 0 0 2 10 9 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) TRP56 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 ( 44) SER77 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 18) LYS52 0 0 0 0 0 1 3 8 5 0 0 0 0 0 0 0 0 0 0 ( 22) TRP56 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER77 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 chainC ( 17) ASP50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 19) LYS52 0 0 0 0 0 0 0 0 0 0 0 0 3 6 7 3 0 0 0 ( 23) TRP56 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 chainD ( 18) LYS52 0 0 0 0 0 0 0 0 0 0 3 9 1 0 0 0 0 0 0 ( 22) TRP56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 43) SER77 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence neeekikndmlkyiekdpKigvWsypaflvlqylyhtvpgfkmSrtakealekglkemyptlftiaekiakerfke/eeekikndmlkyiekdpKigvWsypaflvlqylyhtvpgfkmSrtakealekglkemyptlftiaekiakerfk/neeekikndmlkyiekDpKigvWsypaflvlqylyhtvpgfkmsrtakealekglkemyptlftiaekiakerfk/eeekikndmlkyiekdpKigvWsypaflvlqylyhtvpgfkmSrtakealekglkemyptlftiaekiakerfk >7dvv_A:"Winged_helix"_DNA-binding_domain; title=HEME SENSOR PROTEIN PEFR FROM STREPTOCOCCUS AGALACTIAE BOUND TO OPERATOR DNA (28-MER) organism=Streptococcus agalactiae serotype III (strain NEM316) / Streptococcus agalactiae serotype III (strain NEM316) DNA sequence DT(L1):DA(M28) DA(L2):DT(M27) DA(L3):DT(M26) DA(L4):DT(M25) DA(L5):DT(M24) DT(L6):DA(M23) DA(L7):DT(M22) DG(L8):DC(M21) DT(L9):DA(M20) DT(L10):DA(M19) DC(L11):DG(M18) DT(L12):DA(M17) DC(L13):DG(M16) DA(L14):DT(M15) DC(L15):DG(M14) DG(L16):DC(M13) DA(L17):DT(M12) DT(L18):DA(M11) DA(L19):DT(M10) DA(L20):DT(M9) DC(L21):DG(M8) DT(L22):DA(M7) DA(L23):DT(M6) DT(L24):DA(M5) DT(L25):DA(M4) DA(L26):DT(M3) DA(L27):DT(M2) DA(L28):DT(M1) chainA ( 60) SER62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 61) LYS63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 3 0 0 0 0 0 0 ( 62) SER64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 5 0 0 0 0 0 0 0 0 0 ( 63) VAL65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 66) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 69) LYS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 70) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 1 0 0 0 prot.sequence nplqkarilvnqlekyldryakeydvehlagpqghlvmhlykhpdkdmsikdaeeilhiSKSVaSNlvKRmekngfiaivpsktdkRvkylylthlgkqkatqfeifleklhstmlagitkeeirttkkvirtlaknma >7dvv_AB:"Winged_helix"_DNA-binding_domain; title=HEME SENSOR PROTEIN PEFR FROM STREPTOCOCCUS AGALACTIAE BOUND TO OPERATOR DNA (28-MER) organism=Streptococcus agalactiae serotype III (strain NEM316) / Streptococcus agalactiae serotype III (strain NEM316) / Streptococcus agalactiae serotype III (strain NEM316) / Streptococcus agalactiae serotype III (strain NEM316) DNA sequence DT(L1):DA(M28) DA(L2):DT(M27) DA(L3):DT(M26) DA(L4):DT(M25) DA(L5):DT(M24) DT(L6):DA(M23) DA(L7):DT(M22) DG(L8):DC(M21) DT(L9):DA(M20) DT(L10):DA(M19) DC(L11):DG(M18) DT(L12):DA(M17) DC(L13):DG(M16) DA(L14):DT(M15) DC(L15):DG(M14) DG(L16):DC(M13) DA(L17):DT(M12) DT(L18):DA(M11) DA(L19):DT(M10) DA(L20):DT(M9) DC(L21):DG(M8) DT(L22):DA(M7) DA(L23):DT(M6) DT(L24):DA(M5) DT(L25):DA(M4) DA(L26):DT(M3) DA(L27):DT(M2) DA(L28):DT(M1) chainA ( 60) SER62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 61) LYS63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 3 0 0 0 0 0 0 ( 62) SER64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 5 0 0 0 0 0 0 0 0 0 ( 63) VAL65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 66) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 69) LYS71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 70) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 1 0 0 0 chainB ( 61) SER62 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) LYS63 0 0 0 0 0 0 6 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) SER64 0 0 0 0 0 0 0 0 0 5 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) VAL65 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) SER67 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ASN68 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LYS71 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG89 0 0 0 1 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nplqkarilvnqlekyldryakeydvehlagpqghlvmhlykhpdkdmsikdaeeilhiSKSVaSNlvKRmekngfiaivpsktdkRvkylylthlgkqkatqfeifleklhstmlagitkeeirttkkvirtlaknma/enplqkarilvnqlekyldryakeydvehlagpqghlvmhlykhpdkdmsikdaeeilhiSKSVaSNlvKRmekngfiaivpsktdkRvkylylthlgkqkatqfeifleklhstmlagitkeeirttkkvirtlaknma >7dw5_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF DUX4 HD1-HD2 DOMAIN COMPLEXED WITH ERG SITES organism=Homo sapiens DNA sequence DC(D1):DG(C21) DA(D2):DT(C20) DG(D3):DC(C19) DT(D4):DA(C18) DC(D5):DG(C17) DT(D6):DA(C16) DA(D7):DT(C15) DA(D8):DT(C14) DT(D9):DA(C13) DC(D10):DG(C12) DT(D11):DA(C11) DC(D12):DG(C10) DA(D13):DT(C9) DT(D14):DA(C8) DC(D15):DG(C7) DA(D16):DT(C6) DA(D17):DT(C5) DG(D18):DC(C4) DT(D19):DA(C3) DC(D20):DG(C2) DG(D21):DC(C1) chainB ( 4) ARG23 0 0 0 0 11 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ILE65 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) GLN68 0 0 0 0 0 0 0 0 0 3 9 3 0 0 0 0 0 0 0 0 0 ( 50) ASN69 0 0 0 0 0 0 5 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) SER72 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rrrRlvwtpsqsealracfernpypgiatrerlaqaigipeprvqIwfQNerSrqlrqhrresrpwpgrrgppegrrkrtavtgsqtalllrafekdrfpgiaareelaretglpesriqiwfqnrrarhp >7dwr_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF SULFOLOBUS SOLFATARICUS SEGA-ADP COMPLEX BOUND TO DNA organism=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) / Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) DNA sequence DA(G1):DT(H24) DG(G2):DC(H23) DG(G3):DC(H22) DG(G4):DC(H21) DT(G5):DA(H20) DG(G6):DC(H19) DT(G7):DA(H18) DT(G8):DA(H17) DC(G9):DG(H16) DC(G10):DG(H15) DA(G11):DT(H14) DC(G12):DG(H13) DG(G13):DC(H12) DT(G14):DA(H11) DG(G15):DC(H10) DA(G16):DT(H9) DA(G17):DT(H8) DA(G18):DT(H7) DC(G19):DG(H6) DA(G20):DT(H5) DG(G21):DC(H4) DG(G22):DC(H3) DA(G24):DC(H2) chainB (129) THR129 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) GLN131 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) PHE158 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) PRO180 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) ARG182 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivtvinqkggvgktttsvnlsyylskekktglldldpeggatisygmkrelkelplgeksvnifnvevfpahigllklelngdveeisnkikeigkqfdflvidtppnlgtlaisamlvadrivspvTpQplaleaiknldsrlksigknaysftnFskkvvkldnlssvkfteitipPsRlfieasrlgvpalryeevrikkpklanyyqqlakvise >7dy6_CDFK:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=A REFINED CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI RNAP-PROMOTER OPEN COMPLEX (RPO) WITH SSPA organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(H3):DT(G60) DA(H4):DT(G59) DC(H5):DG(G58) DA(H6):DT(G57) DA(H7):DT(G56) DA(H8):DT(G55) DA(H9):DT(G54) DT(H10):DA(G53) DG(H11):DC(G52) DA(H12):DT(G51) DT(H13):DA(G50) DT(H14):DA(G49) DG(H15):DC(G48) DA(H16):DT(G47) DC(H17):DG(G46) DA(H18):DT(G45) DA(H19):DT(G44) DA(H20):DT(G43) DA(H21):DT(G42) DG(H22):DC(G41) DT(H23):DA(G40) DG(H24):DC(G39) DT(H25):DA(G38) DT(H26):DA(G37) DA(H27):DT(G36) DA(H28):DT(G35) DA(H29):DT(G34) DT(H30):DA(G33) DT(H31):DA(G32) DG(H32):DC(G31) DT(H33):DA(G30) DC(H35):DG(G28) DT(H36):DA(G27) DA(H37):DT(G26) DT(H38):DA(G13) DA(H39):DG(G12) DA(H40):DT(G11) DT(H41):DG(G10) DG(H42):DC(G9) DG(H43):DC(G8) DG(H44):DT(G7) DA(H45):DA(G6) DG(H46):DC(G5) DC(H47):DG(G4) DT(H48):DT(G3) DG(H49):DC(G2) DT(H50):DC(G1) DC(H51):DC(G0) chainK ( 41) LYS298 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER299 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 (180) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 (365) TYR367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 8 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 (443) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (536) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (544) GLU546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (545) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 chainD chainF ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 0 ( 16) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 27) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (243) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (245) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 (246) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (254) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 (289) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 9 0 0 0 0 0 0 0 0 0 0 0 (290) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 (293) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) GLU585 0 0 0 0 0 0 0 0 0 0 0 3 16 6 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) GLN589 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgSWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiYrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmvqnnplseithkrrisalgpggLtreRagfEVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/kdllkflkaqtkteefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvviegGmtnlerqqilteeqyldaleefgdefdakmGAeaiqallksmdleqeCeqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnkrvdysgrsvitvgpylrlhqcglPkkmAleLfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaIqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsGlasLharVKvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmaaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/eigrttdpVRmyMreMgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvddpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkYtnRglqfldliqegniglmkavdkfEyrRgYkfSTYaTWWiRQaitRsiadqartiripvHmietinklnRisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtrEriRQieakalrklrhpsrsevlrsfld/dpillrpvddleltvrsanclkaeaihyigdlvqrtevelKSlteikdvlasrglslgmrlenwppa >7dy6_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=A REFINED CRYO-EM STRUCTURE OF AN ESCHERICHIA COLI RNAP-PROMOTER OPEN COMPLEX (RPO) WITH SSPA organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(H3):DT(G60) DA(H4):DT(G59) DC(H5):DG(G58) DA(H6):DT(G57) DA(H7):DT(G56) DA(H8):DT(G55) DA(H9):DT(G54) DT(H10):DA(G53) DG(H11):DC(G52) DA(H12):DT(G51) DT(H13):DA(G50) DT(H14):DA(G49) DG(H15):DC(G48) DA(H16):DT(G47) DC(H17):DG(G46) DA(H18):DT(G45) DA(H19):DT(G44) DA(H20):DT(G43) DA(H21):DT(G42) DG(H22):DC(G41) DT(H23):DA(G40) DG(H24):DC(G39) DT(H25):DA(G38) DT(H26):DA(G37) DA(H27):DT(G36) DA(H28):DT(G35) DA(H29):DT(G34) DT(H30):DA(G33) DT(H31):DA(G32) DG(H32):DC(G31) DT(H33):DA(G30) DC(H35):DG(G28) DT(H36):DA(G27) DA(H37):DT(G26) DT(H38):DA(G13) DA(H39):DG(G12) DA(H40):DT(G11) DT(H41):DG(G10) DG(H42):DC(G9) DG(H43):DC(G8) DG(H44):DT(G7) DA(H45):DA(G6) DG(H46):DC(G5) DC(H47):DG(G4) DT(H48):DT(G3) DG(H49):DC(G2) DT(H50):DC(G1) DC(H51):DC(G0) chainF ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 0 ( 16) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 27) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (243) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (245) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 (246) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (254) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 (289) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 9 0 0 0 0 0 0 0 0 0 0 0 (290) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 (293) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) GLU585 0 0 0 0 0 0 0 0 0 0 0 3 16 6 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) GLN589 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eigrttdpVRmyMreMgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvddpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkYtnRglqfldliqegniglmkavdkfEyrRgYkfSTYaTWWiRQaitRsiadqartiripvHmietinklnRisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtrEriRQieakalrklrhpsrsevlrsfld >7e1b_ABCD:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF VBRR-DNA COMPLEX organism=VIBRIO PARAHAEMOLYTICUS DNA sequence DA(Z1):DT(Y26) DC(Z2):DG(Y25) DA(Z3):DT(Y24) DA(Z4):DT(Y23) DG(Z5):DC(Y22) DC(Z6):DG(Y21) DG(Z7):DC(Y20) DA(Z8):DT(Y19) DT(Z9):DA(Y18) DG(Z10):DC(Y17) DA(Z11):DT(Y16) DA(Z12):DT(Y15) DG(Z13):DC(Y14) DA(Z14):DT(Y13) DA(Z15):DT(Y12) DT(Z16):DA(Y11) DT(Z17):DA(Y10) DA(Z18):DT(Y9) DG(Z19):DC(Y8) DA(Z20):DT(Y7) DA(Z21):DT(Y6) DT(Z22):DA(Y4) DG(Z24):DC(Y3) DT(Z25):DA(Y2) DG(Z26):DC(Y1) chainA (179) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (183) THR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (186) LEU197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (201) ARG212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 chainB (178) ARG190 0 0 0 0 0 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) THR191 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) THR194 0 0 0 0 0 0 0 1 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) HIS195 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) LEU197 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (179) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 7 4 1 0 0 0 0 0 (183) THR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 (186) LEU197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (201) ARG212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 chainD (179) THR191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (182) THR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (183) HIS195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (186) GLN198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence kqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlranadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgynttRtvdThvLqlrqklpgleietlRgvgykmka/mkqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlrnadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgyntRTvdTHvLqlrqklpgleietlrgvgykmka/kqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlranadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgynttRtvdThvLqlrqklpgleietlRgvgykmka/mkqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlrnadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgyntrTvdTHvlQlrqklpgleietlrgvgykmka >7e1b_B:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF VBRR-DNA COMPLEX organism=VIBRIO PARAHAEMOLYTICUS DNA sequence DC(Y1):DG(Z26) DA(Y2):DT(Z25) DC(Y3):DG(Z24) DA(Y4):DT(Z22) DT(Y6):DA(Z21) DT(Y7):DA(Z20) DC(Y8):DG(Z19) DT(Y9):DA(Z18) DA(Y10):DT(Z17) DA(Y11):DT(Z16) DT(Y12):DA(Z15) DT(Y13):DA(Z14) DC(Y14):DG(Z13) DT(Y15):DA(Z12) DT(Y16):DA(Z11) DC(Y17):DG(Z10) DA(Y18):DT(Z9) DT(Y19):DA(Z8) DC(Y20):DG(Z7) DG(Y21):DC(Z6) DC(Y22):DG(Z5) DT(Y23):DA(Z4) DT(Y24):DA(Z3) DG(Y25):DC(Z2) DT(Y26):DA(Z1) chainB (178) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 (179) THR191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (182) THR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 6 1 0 0 0 0 0 0 0 (183) HIS195 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 (185) LEU197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence mkqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlrnadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgyntRTvdTHvLqlrqklpgleietlrgvgykmka >7e1b_EFG:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYSTAL STRUCTURE OF VBRR-DNA COMPLEX organism=VIBRIO PARAHAEMOLYTICUS DNA sequence DA(J1):DT(I26) DC(J2):DG(I25) DA(J3):DT(I24) DA(J4):DT(I23) DG(J5):DC(I22) DC(J6):DG(I21) DG(J7):DC(I20) DA(J8):DT(I19) DT(J9):DA(I18) DG(J10):DC(I17) DA(J11):DT(I16) DA(J12):DT(I15) DG(J13):DC(I14) DA(J14):DT(I13) DA(J15):DT(I12) DT(J16):DA(I11) DT(J17):DA(I10) DA(J18):DT(I9) DG(J19):DC(I8) DA(J20):DT(I7) DA(J21):DT(I6) DT(J22):DA(I5) DT(J23):DA(I4) DG(J24):DC(I3) DT(J25):DA(I2) DG(J26):DC(I1) chainE (179) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 5 0 0 0 0 0 0 (183) THR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (186) LEU197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 chainF (178) ARG190 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) THR191 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) THR194 0 0 0 0 0 0 0 2 6 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) HIS195 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) LEU197 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) GLN198 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG212 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (179) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 (183) THR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 0 0 0 (186) LEU197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 (201) ARG212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 5 0 0 0 0 prot.sequence mkqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlrnadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgynttRtvdThvLqlrqklpgleietlrgvgykmka/kqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlranadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgyntRTvdTHvLQlrqklpgleietlRgvgykmka/mkqtlllveddknladgllvsleqagyeclhveriadvepqwkkadlvildrqlpdgdsvqhlpewkkikdvpvilltalvtvkdkvagldsgandyltkpfaeaelfariraqlrnadkvmtkdleidratrevifkgdlitltrtefdlllflasnlgrvftrdelldhvwgynttRtvdThvLqlrqklpgleietlRgvgykmka >7e8i_A:Histone-fold; title=STRUCTURAL INSIGHT INTO BRCA1-BARD1 COMPLEX RECRUITMENT TO DAMAGED CHROMATIN organism=XENOPUS LAEVIS DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge >7e8i_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURAL INSIGHT INTO BRCA1-BARD1 COMPLEX RECRUITMENT TO DAMAGED CHROMATIN organism=XENOPUS LAEVIS DNA sequence DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainA ( 2) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/gGAkrhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvLkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/tRakactrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rkvLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kactrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/trkesyaiyvykvlkqvhpdtgisskamsImnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7e9c_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE 1:1 ORC1 BAH DOMAIN IN COMPLEX WITH NUCLEOSOME organism=? DNA sequence DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DC(J77):DG(I71) DG(J78):DC(I70) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J138):DC(I11) DA(J139):DC(I10) DT(J140):DT(I9) DT(J141):DA(I8) DC(J142):DA(I7) DT(J143):DG(I6) chainA ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 11) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 25) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 18) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence hRYkpgtvalReirrfqkstelliRklpfqrlvreiaqdfktdlrfqssaigalqesveaylvslfedtnlaaihakrvtiqkkdiklarrlrg/rhrkilrdniqgitkpairrlarrggvkRisgliyeevravlksflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfg/qsrsakagltfpvgrvhrllrrgnyaqrIgsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihqnl/vrketyssyiykvlkqthpdtgisqksmSilnsfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkysss/valreirrfqkstelliRklpfqrlvreiaqdfktdlrfqssaigalqesveaylvslfedtnlaaihakrvtiqkkdiklarrlrg/ilrdniqgitkpairrlarrggvkRisgliyeevravlksflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfg/qsrsakagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihqnll/vrketyssyiykvlkqthpdtgisqksMsilnsfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkysss >7e9c_G:Histone-fold; title=CRYO-EM STRUCTURE OF THE 1:1 ORC1 BAH DOMAIN IN COMPLEX WITH NUCLEOSOME organism=? DNA sequence DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DC(J77):DG(I71) DG(J78):DC(I70) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J138):DC(I11) DA(J139):DC(I10) DT(J140):DT(I9) DT(J141):DA(I8) DC(J142):DA(I7) DT(J143):DG(I6) chainG ( 28) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qsrsakagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihqnll >7e9f_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE 2:1 ORC1 BAH DOMAIN IN COMPLEX WITH NUCLEOSOME organism=? DNA sequence DC(J16):DG(I132) DT(J17):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) chainA ( 42) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 28) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE chainF chainG ( 28) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainH prot.sequence kpgtvalreirrfqkstellirklpfqrlvreiaqdfktdlRfqssaigalqesveaylvslfedtnlaaihakrvtiqkkdiklarrlrg/rkilrdniqgitkpairrlarrggvkrisgliyeevravlkSflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfg/qsrsakagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihqnl/vrketyssyiykvlkqthpdtgisqksMsilnsfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkysss/valreirrfqkstellirklpfqrlvrEiaqdfktdlrfqssaigalqesveaylvslfedtnlaaihakrvtiqkkdiklarrlrg/ilrdniqgitkpairrlarrggvkrisGliyeevravlksflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfg/qsrsakagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkktRiiprhlqlairnddelnkllgnvtiaqggvlpnihqnll/vrketyssyiykvlkqthpdtgisqksMsilnsfvndiferiateasklaaynkkstisareIqtavrlilpgelakhavsegtravtkysss >7ea5_ABCDEFGH:Histone-fold; title=YEAST SET2 BOUND TO A NUCLEOSOME CONTAINING ONCOHISTONE MUTATIONS organism=XENOPUS LAEVIS DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) chainA ( 7) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 1) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvmkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/dniqgiTkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/ktrkesyaiyvykvlkqvhpdtgisskamSimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/dNIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfg/aKTrssraglqfpvgrvhrllrkgnyaervgagapvylaavleylTaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >7ea5_E:Histone-fold; title=YEAST SET2 BOUND TO A NUCLEOSOME CONTAINING ONCOHISTONE MUTATIONS organism=? DNA sequence DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >7ea8_A:Histone-fold; title=HUMAN SETD2 BOUND TO A NUCLEOSOME CONTAINING ONCOHISTONE MUTATIONS organism=? DNA sequence DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) chainA ( 8) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ggvmkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge >7ea8_ABCDEFGH:Histone-fold;PH_domain-like; title=HUMAN SETD2 BOUND TO A NUCLEOSOME CONTAINING ONCOHISTONE MUTATIONS organism=HOMO SAPIENS DNA sequence DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) chainA ( 8) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH prot.sequence ggvmkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/dniqgitKpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytEhakrktvtamdvvyalkrqgrtlygfg/aktrssrAglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilElagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/HRyrpgtvalreirryqkstellirklpfqrlvreiaqfktdlrfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/DNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/KTrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/ESysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >7ecw_BHJ: title=THE CSY-ACRIF14-DSDNA COMPLEX organism=MORAXELLA PHAGE MCAT5 / PSEUDOMONAS AERUGINOSA DNA sequence DA(N32) DG(N33) DG(N34) DT(N35) DG(N36) DC(N37) DA(N38) DG(N39) DC(N40) DT(N41) DG(N42) DC(N43) DT(N44) chainB ( 92) THR94 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) ILE97 5 0 0 0 0 0 0 0 0 0 0 0 0 chainH (226) LEU231 3 0 0 0 0 0 0 0 0 0 0 0 0 chainJ prot.sequence vtdpeallllprlsiqnanaisspltwgfpspgaftgfvhalqrrvgisldieldgvgivchrfeaqisqpagkrtkvfnltrnplnrdgsTaaIveegrahlevslllgvhgdglddhpaqeiarqvqeqagamrlaggsilpwcnerfpapnaellmlggsdeqrrknqrrltrrllpgfalvsreallqqhletlrttlpeattldalldlcrinfepwqvrdkpgwlvpipagynalsplylpgevrnardretplrfvenlfglgewlsphrvaalsdllwyhhaepdkglyrwstprfv/lstasvlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisnrlktkdrdpakldasiqspnlqtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeLildkgdkkgqksktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggvfge/mkkiemieisqnrqnltaflhiseikainakladgvdvdkksfdeicsivleqyqakqisnkqaseifetlakanksfkiekfrcshgyneiykyspdheaylfyckggqgqlnkliaengrfm >7ecw_H: title=THE CSY-ACRIF14-DSDNA COMPLEX organism=? DNA sequence DA(N32) DG(N33) DG(N34) DT(N35) DG(N36) DC(N37) DA(N38) DG(N39) DC(N40) DT(N41) DG(N42) DC(N43) DT(N44) chainH (226) LEU231 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lstasvlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisnrlktkdrdpakldasiqspnlqtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeLildkgdkkgqksktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggvfge >7edb_A: title=ECOT38I RESTRICTION ENDONUCLEASE COMPLEXED WITH DNA organism=ESCHERICHIA PHAGE P2 DNA sequence DC(F1):DG(E13) DG(F2):DC(E12) DT(F3):DA(E11) DG(F4):DC(E10) DA(F5):DT(E9) DG(F6):DC(E8) DC(F7):DG(E7) DT(F8):DA(E6) DC(F9):DG(E5) DT(F10):DA(E4) DG(F11):DC(E3) DC(F12):DG(E2) chainA ( 80) ASP80 0 1 3 0 0 0 0 0 0 0 0 0 ( 82) ARG82 0 0 38 13 0 0 0 0 0 0 0 0 ( 83) SER83 0 0 1 0 0 0 0 0 0 0 0 0 (107) GLU107 0 0 0 10 6 0 0 0 0 0 0 0 (110) LEU110 0 0 0 9 9 3 0 0 0 0 0 0 (111) ASN111 0 0 0 0 0 2 7 0 0 0 0 0 (112) LYS112 0 0 0 0 0 0 1 4 0 0 0 0 (115) ARG115 0 0 0 5 12 4 0 0 0 0 0 0 (126) ARG126 0 0 0 0 0 0 0 0 5 0 0 0 (127) ARG127 0 0 0 0 0 0 0 0 0 0 0 7 (220) ASN220 0 0 0 0 0 0 4 7 2 0 0 0 (222) ALA222 0 0 0 0 0 1 1 0 0 0 0 0 (249) LYS249 0 0 0 0 0 0 0 0 2 5 0 0 (250) PRO250 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence mkvlvnheqaynviinaindakkltdyktnnqwvsiqnvilgthltyryilitgllakatdprvnplalqanapvdgayDaRSlchsvivgkvegpflegklgasnEpfLNKpaRymlhssdnpvRRgndkvlqqlsidilhaattqtlayemlvialyftlqrtnrvitpnsinfdfhkiiyniishpcDgetcaiaaaislhllgeqrgwiikahpvNqAgSsskeildidvyhddivflsievkdKPfnyqdvnhavskasasgiskviflkgpratnldideslaienaatkgvslsfsdvmtftttcyalspllsndriidfinntlkdirakdstieyiqsifk >7edb_AB: title=ECOT38I RESTRICTION ENDONUCLEASE COMPLEXED WITH DNA organism=ESCHERICHIA PHAGE P2 DNA sequence DG(E2):DC(F12) DC(E3):DG(F11) DA(E4):DT(F10) DG(E5):DC(F9) DA(E6):DT(F8) DG(E7):DC(F7) DC(E8):DG(F6) DT(E9):DA(F5) DC(E10):DG(F4) DA(E11):DT(F3) DC(E12):DG(F2) DG(E13):DC(F1) chainA ( 80) ASP80 0 0 0 0 0 0 0 0 0 3 1 0 ( 82) ARG82 0 0 0 0 0 0 0 0 13 38 0 0 ( 83) SER83 0 0 0 0 0 0 0 0 0 1 0 0 (107) GLU107 0 0 0 0 0 0 0 6 10 0 0 0 (110) LEU110 0 0 0 0 0 0 3 9 9 0 0 0 (111) ASN111 0 0 0 0 0 7 2 0 0 0 0 0 (112) LYS112 0 0 0 0 4 1 0 0 0 0 0 0 (115) ARG115 0 0 0 0 0 0 4 12 5 0 0 0 (126) ARG126 0 0 0 5 0 0 0 0 0 0 0 0 (127) ARG127 7 0 0 0 0 0 0 0 0 0 0 0 (220) ASN220 0 0 0 2 7 4 0 0 0 0 0 0 (222) ALA222 0 0 0 0 0 1 1 0 0 0 0 0 (249) LYS249 0 0 5 2 0 0 0 0 0 0 0 0 (250) PRO250 0 0 1 0 0 0 0 0 0 0 0 0 chainB ( 80) ASP80 0 1 1 0 0 0 0 0 0 0 0 0 ( 82) ARG82 0 0 33 13 0 0 0 0 0 0 0 0 (107) GLU107 0 0 0 9 9 0 0 0 0 0 0 0 (110) LEU110 0 0 0 9 9 3 0 0 0 0 0 0 (111) ASN111 0 0 0 0 0 4 5 0 0 0 0 0 (112) LYS112 0 0 0 0 0 0 1 3 0 0 0 0 (115) ARG115 0 0 0 5 12 5 0 0 0 0 0 0 (126) ARG126 0 0 0 0 0 0 0 0 9 2 1 0 prot.sequence mkvlvnheqaynviinaindakkltdyktnnqwvsiqnvilgthltyryilitgllakatdprvnplalqanapvdgayDaRSlchsvivgkvegpflegklgasnEpfLNKpaRymlhssdnpvRRgndkvlqqlsidilhaattqtlayemlvialyftlqrtnrvitpnsinfdfhkiiyniishpcdgetcaiaaaislhllgeqrgwiikahpvNqAgSsskeildidvyhddivflsievkdKPfnyqdvnhavskasasgiskviflkgpratnldideslaienaatkgvslsfsdvmtftttcyalspllsndriidfinntlkdirakdstieyiqsifk/mkvlvnheqaynviinaindakkltdyktnnqwvsiqnvilgthltyryilitgllakatdprvnplalqanapvdgayDaRslchsvivgkvegpflegklgasnEpfLNKpaRymlhssdnpvRrgndkvlqqlsidilhaattqtlayemlvialyftlqrtnrvitpnsinfdfhkiiyniishpcdgetcaiaaaislhllgeqrgwiikahpvnqagskeildidvyhddivflsievkdkpfnyqdvnhavskasasgiskviflkgpratnldideslaienaatkgvslsfsdvmtftttcyalspllsndriidfinntlkdirakdstieyiqsif >7eds_A:p53-like_transcription_factors; title=HUMAN P53 CORE DOMAIN WITH GERMLINE HOT SPOT MUTATION M133T IN COMPLEX WITH THE NATURAL PIG3 P53-RESPONSE ELEMENT AND ARSENIC organism=Homo sapiens DNA sequence DA(F1):DT(R30) DG(F2):DC(R29) DA(F3):DT(R28) DG(F4):DC(R27) DC(F5):DG(R26) DC(F6):DG(R25) DA(F7):DT(R24) DG(F8):DC(R23) DC(F9):DG(R22) DT(F10):DA(R21) DT(F11):DA(R20) DG(F12):DC(R19) DC(F13):DG(R18) DC(F14):DG(R17) DC(F15):DG(R16) DA(F16):DT(R15) DC(F17):DG(R14) DC(F18):DG(R13) DC(F19):DG(R12) DA(F20):DT(R11) DT(F21):DA(R10) DG(F22):DC(R9) DC(F23):DG(R8) DT(F24):DA(R7) DC(F25):DG(R6) DG(F26):DC(R5) DC(F27):DG(R4) DG(F28):DC(R3) DT(F29):DA(R2) DG(F30):DC(R1) chainA (176) ALA276 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) CYS277 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ARG280 0 0 0 0 0 0 0 2 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflvtctyspalnktfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrkkg >7edx_ABPQR: title=P53-BOUND TFIID-BASED CORE PIC ON HDM2 PROMOTER organism=HOMO SAPIENS DNA sequence DT(X-45):DA(Y45) DC(X-44):DG(Y44) DT(X-43):DA(Y43) DC(X-42):DG(Y42) DC(X-41):DG(Y41) DA(X-40):DT(Y40) DG(X-39):DC(Y39) DC(X-38):DG(Y38) DT(X-37):DA(Y37) DG(X-35):DC(Y35) DG(X-34):DC(Y34) DG(X-33):DC(Y33) DC(X-32):DG(Y32) DT(X-31):DA(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DT(X-28):DA(Y28) DT(X-27):DA(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DA(X-24):DG(Y23) DC(X-22):DG(Y22) DA(X-21):DT(Y21) DT(X-20):DA(Y20) DG(X-19):DC(Y19) DC(X-18):DG(Y18) DA(X-17):DT(Y17) DT(X-16):DA(Y16) DT(X-15):DA(Y15) DT(X-14):DA(Y14) DT(X-13):DA(Y13) DC(X-12):DG(Y12) DC(X-11):DG(Y11) DC(X-10):DG(Y10) DA(X-9):DT(Y9) DG(X-8):DC(Y8) DC(X-7):DG(Y7) DT(X-6):DA(Y6) DG(X-5):DC(Y5) DT(X-4):DA(Y4) DG(X-3):DC(Y3) DT(X-2):DA(Y2) DT(X-1):DA(Y1) DC(X0):DG(Y0) DA(X1):DT(Y-1) DG(X2):DC(Y-2) DT(X3):DA(Y-3) DG(X4):DC(Y-4) DG(X5):DC(Y-5) DC(X6):DG(Y-6) DG(X7):DC(Y-7) DA(X8):DT(Y-8) DT(X9):DA(Y-9) DT(X10):DA(Y-10) DG(X11):DC(Y-11) DG(X12):DC(Y-12) DA(X13):DT(Y-13) DG(X14):DC(Y-14) DG(X15):DC(Y-15) DG(X16):DC(Y-16) DT(X17):DA(Y-17) DA(X18):DT(Y-18) DG(X19):DC(Y-19) DA(X20):DT(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DT(X23):DA(Y-23) DG(X24):DC(Y-24) DT(X25):DA(Y-25) DG(X26):DC(Y-26) DG(X27):DC(Y-27) DG(X28):DC(Y-28) DC(X29):DG(Y-29) DA(X30):DT(Y-30) DC(X31):DG(Y-31) chainA (358) SER840 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 (362) LYS844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 chainB chainP ( 7) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 7 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR (213) ALA281 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) VAL283 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) ARG286 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wrygparlwydmlgvpeddlladenflmvtqlhweddiiwdgepwysifpidnedlvygrwedniiwdaqamprlleppvltldpndenlilpwnlsndeyyypkiiqhsipavelrqpffpthmgpiklrqfhrpplkkysfgalsqpgphsvqpllkhikkkakmreqerqasgggemffmrtpqdltgkdgdlilaeyseengplmmqvgmatkiknyykrkpgkdpgapdckygetvychtspflgslhpgqllqafennlfrapiylhkmpetdfliirtrqgyyirelvdifvvgqqcplfevpgpnskranthirdflqvfiyrlfwkskdrprrirmedikkafpshseSsirKrlklcadfkrtgmdsnwwvlksdfrlpteeeiramvspeqccayysmiaaeqrlkdagddevrtapwnttrafiaamkgkcllevtgvadptgcgegfsyvkipnkdadlrrlslknakqllrkfgvpeeeikklsrwevidvvrtmsterfsvaehqerykeecqrifdlqnkvlsstevlsttasvtslnssatgrclkiyrtfrdeegkeyvrcetvrkpavidayvrirttkdeef/gfesprpyklthqvvcinninfqrksvvgfveltifptvanlnriklnskqcriyrvrindleaafiyndptlevchseskqrnlnyfsnayaaavsavdpdagngelcikvpselwkhvdelkvlkihinfsldqpkgglhfvvpsvegsmaergahvfscgyqnstrfwfpcvdsyselctwkleftvdaamvavsngdlvetvythdmrkktfhymltiptaasnislaigpfeilvdpymhevthfclpqllpllkhttsylhevfefyeeiltcrypyscfktvfideayvevaayasmsifstnllhsamiidetpltrrclaqslaqqffgcfisrmswsdewvlkgisgYiygLwmkktfgvneyrhwikeeldkivayelktggvllhpifnpashlhfsikhphtlsweyysmfqckahlvmrlienrismefmlqvfnkllslastassqkfqshmwsqmlvstsgflksisnvsgkdiqplikqwvdqsgvvkfygsfafnrkrnvleleikqdytspgtqkyvgplkvtvqeldgsfnhtlqieenslkhdipchsksrrnkkkkiplmngeevdmdlsamdadspllwiridpdmsvlrkvefeqadfmwqyqlryerdvvaqqesilalekfptpasrlaltdileqeqcfyrvrmsacfclakiansmvstwtgppamkslftrmfcckscpnivktnnfmsfqsyflqktmpvamallrdvhnlcpkevltfildlikyndnrknkfsdnyyraemidalansvtpavsvnnevrtldnlnpdvrlileeitrflnmekllpsyrhtitvsclrairvlqknghvpsdpalfksyaeyghfvdiriaaleavvdytkvdrsyeelqwllnmiqndpvpyvrhkilnmltknppftknmesplcnealvdqlwklmnsgtshdwrlrcgavdlyftlfglsrpsclp/ivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVctgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyRsViedvindvrdiflddgvdeqvlmelktLwenklmqsravdgfHsEeeeepLnseddvsdeegqelfdtenvvvcqydkihrsknkwkFhLkdgimnlngrdyifskaigdaew/vtcpnhpdailvedyragdmicpecglvvgdrvidvgtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvAdVtiRqsyrliyprapdlfptdfkfdtpvdklpql >7edx_P:TATA-box_binding_protein-like; title=P53-BOUND TFIID-BASED CORE PIC ON HDM2 PROMOTER organism=? DNA sequence DG(Y-31):DC(X31) DT(Y-30):DA(X30) DG(Y-29):DC(X29) DC(Y-28):DG(X28) DC(Y-27):DG(X27) DC(Y-26):DG(X26) DA(Y-25):DT(X25) DC(Y-24):DG(X24) DA(Y-23):DT(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DT(Y-20):DA(X20) DC(Y-19):DG(X19) DT(Y-18):DA(X18) DA(Y-17):DT(X17) DC(Y-16):DG(X16) DC(Y-15):DG(X15) DC(Y-14):DG(X14) DT(Y-13):DA(X13) DC(Y-12):DG(X12) DC(Y-11):DG(X11) DA(Y-10):DT(X10) DA(Y-9):DT(X9) DT(Y-8):DA(X8) DC(Y-7):DG(X7) DG(Y-6):DC(X6) DC(Y-5):DG(X5) DC(Y-4):DG(X4) DA(Y-3):DT(X3) DC(Y-2):DG(X2) DT(Y-1):DA(X1) DG(Y0):DC(X0) DA(Y1):DT(X-1) DA(Y2):DT(X-2) DC(Y3):DG(X-3) DA(Y4):DT(X-4) DC(Y5):DG(X-5) DA(Y6):DT(X-6) DG(Y7):DC(X-7) DC(Y8):DG(X-8) DT(Y9):DA(X-9) DG(Y10):DC(X-10) DG(Y11):DC(X-11) DG(Y12):DC(X-12) DA(Y13):DT(X-13) DA(Y14):DT(X-14) DA(Y15):DT(X-15) DA(Y16):DT(X-16) DT(Y17):DA(X-17) DG(Y18):DC(X-18) DC(Y19):DG(X-19) DA(Y20):DT(X-20) DT(Y21):DA(X-21) DG(Y22):DC(X-22) DG(Y23):DA(X-24) DT(Y25):DA(X-25) DT(Y26):DA(X-26) DA(Y27):DT(X-27) DA(Y28):DT(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DA(Y31):DT(X-31) DG(Y32):DC(X-32) DC(Y33):DG(X-33) DC(Y34):DG(X-34) DC(Y35):DG(X-35) DA(Y37):DT(X-37) DG(Y38):DC(X-38) DC(Y39):DG(X-39) DT(Y40):DA(X-40) DG(Y41):DC(X-41) DG(Y42):DC(X-42) DA(Y43):DT(X-43) DG(Y44):DC(X-44) DA(Y45):DT(X-45) chainP ( 7) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVctgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk >7eeu_ABCD: title=HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R282W IN COMPLEX WITH THE NATURAL CDKN1A(P21) P53-RESPONSE ELEMENT AND ARSENIC organism=Homo sapiens DNA sequence DC(I1):DG(J30) DG(I2):DC(J29) DA(I3):DT(J28) DG(I4):DC(J27) DG(I5):DC(J26) DA(I6):DT(J25) DA(I7):DT(J24) DC(I8):DG(J23) DA(I9):DT(J22) DT(I10):DA(J21) DG(I11):DC(J20) DT(I12):DA(J19) DC(I13):DG(J18) DC(I14):DG(J17) DC(I15):DG(J16) DA(I16):DT(J15) DA(I17):DT(J14) DC(I18):DG(J13) DA(I19):DT(J12) DT(I20):DA(J11) DG(I21):DC(J10) DT(I22):DA(J9) DT(I23):DA(J8) DG(I24):DC(J7) DC(I25):DG(J6) DT(I26):DA(J5) DC(I27):DG(J4) DG(I28):DC(J3) DA(I29):DT(J2) DG(I30):DC(J1) chainA (182) ALA276 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) CYS277 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG280 0 0 0 0 0 0 0 0 0 12 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (182) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (183) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (186) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 2 0 0 0 0 0 0 0 0 chainC (182) ALA276 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) CYS277 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG280 0 0 0 0 0 0 2 13 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (182) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (183) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 16 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdwrteeenlrkk/ssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdwrteeenlrkk/ssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdwrteeenlrkk/ssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdwrteeenlrkk >7eeu_E:p53-like_transcription_factors; title=HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R282W IN COMPLEX WITH THE NATURAL CDKN1A(P21) P53-RESPONSE ELEMENT AND ARSENIC organism=Homo sapiens DNA sequence DC(L1):DG(K30) DT(L2):DA(K29) DC(L3):DG(K28) DG(L4):DC(K27) DA(L5):DT(K26) DG(L6):DC(K25) DC(L7):DG(K24) DA(L8):DT(K23) DA(L9):DT(K22) DC(L10):DG(K21) DA(L11):DT(K20) DT(L12):DA(K19) DG(L13):DC(K18) DT(L14):DA(K17) DT(L15):DA(K16) DG(L16):DC(K15) DG(L17):DC(K14) DG(L18):DC(K13) DA(L19):DT(K12) DC(L20):DG(K11) DA(L21):DT(K10) DT(L22):DA(K9) DG(L23):DC(K8) DT(L24):DA(K7) DT(L25):DA(K6) DC(L26):DG(K5) DC(L27):DG(K4) DT(L28):DA(K3) DC(L29):DG(K2) DG(L30):DC(K1) chainE (182) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (183) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (186) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 13 0 0 0 0 0 0 0 0 0 prot.sequence ssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdwrteeenlrkk >7eeu_EFGH: title=HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R282W IN COMPLEX WITH THE NATURAL CDKN1A(P21) P53-RESPONSE ELEMENT AND ARSENIC organism=Homo sapiens DNA sequence DC(K1):DG(L30) DG(K2):DC(L29) DA(K3):DT(L28) DG(K4):DC(L27) DG(K5):DC(L26) DA(K6):DT(L25) DA(K7):DT(L24) DC(K8):DG(L23) DA(K9):DT(L22) DT(K10):DA(L21) DG(K11):DC(L20) DT(K12):DA(L19) DC(K13):DG(L18) DC(K14):DG(L17) DC(K15):DG(L16) DA(K16):DT(L15) DA(K17):DT(L14) DC(K18):DG(L13) DA(K19):DT(L12) DT(K20):DA(L11) DG(K21):DC(L10) DT(K22):DA(L9) DT(K23):DA(L8) DG(K24):DC(L7) DC(K25):DG(L6) DT(K26):DA(L5) DC(K27):DG(L4) DG(K28):DC(L3) DA(K29):DT(L2) DG(K30):DC(L1) chainE (182) ALA276 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) CYS277 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG280 0 0 0 0 0 0 0 0 0 13 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (181) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (182) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (185) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 14 0 0 0 0 0 0 0 0 0 chainG (182) ALA276 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) CYS277 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG280 0 0 0 0 0 0 2 13 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (182) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (183) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 15 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdwrteeenlrkk/svpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdwrteeenlrkk/ssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdwrteeenlrkk/ssvpsqktyqgsygfrlgflhsgtaksvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdwrteeenlrkk >7ef8_A:DNA-glycosylase;Nudix; title=CRYSTAL STRUCTURE OF MOUSE MUTYH IN COMPLEX WITH DNA CONTAINING AP SITE ANALOGUE:8-OXOG (FORM I) organism=Mus musculus DNA sequence DA(B4):DT(C12) DG(B5):DC(C11) DA(B6):DT(C10) DC(B7):DG(C9) 8OG(B8):3DR(C8) DG(B9):DC(C7) DG(B10):DC(C6) DG(B11):DC(C5) DA(B12):DT(C4) DC(B13):DG(C3) DT(B14):DA(C2) chainA ( 60) GLN110 0 0 0 48 3 8 0 0 0 0 0 ( 61) THR111 0 0 0 0 5 0 0 0 0 0 0 ( 62) GLN112 0 0 0 0 0 4 2 7 0 0 0 (100) TYR150 0 0 0 76 42 0 0 0 0 0 0 (103) ARG153 0 0 0 0 3 0 0 0 0 0 0 (264) ARG332 0 0 0 0 0 0 4 0 0 0 0 (347) PHE415 0 0 0 0 3 0 0 0 0 0 0 (348) SER416 0 0 0 2 9 1 0 0 0 0 0 (349) HIS417 0 0 0 6 0 0 0 0 0 0 0 prot.sequence svspyhlfsdvadvtafrsnllswydqekrdlpwrnlakeeansdrrayavwvsevmlqQtQvatvidyytrwmqkwpklqdlasasleevnqlwsglgYysrgrrlqegarkvveelgghmprtaetlqqllpgvgrytagaiasiafdqvtgvvdgnvlrvlcrvraigadptstlvshhlwnlaqqlvdparpgdfnqaamelgatvctpqrplcshcpvqslcrayqrvqeecacqlcltssspwdpsmgvanfprkasRrppreeysatcvveqpgaiggplvllvqrpdsgllaglwefpsvtlepseqhqhkallqelqrwcgplpairlqhlgevihifSHikltyqvyslaldqapastappgarwltweefcnaavstamkkvfrmyedhrq >7ef9_A:DNA-glycosylase;Nudix; title=CRYSTAL STRUCTURE OF MOUSE MUTYH IN COMPLEX WITH DNA CONTAINING AP SITE ANALOGUE:8-OXOG (FORM II) organism=Mus musculus DNA sequence DA(C2):DT(B14) DG(C3):DC(B13) DT(C4):DA(B12) DC(C5):DG(B11) DC(C6):DG(B10) DC(C7):DG(B9) 3DR(C8):8OG(B8) DG(C9):DC(B7) DT(C10):DA(B6) DC(C11):DG(B5) DT(C12):DA(B4) chainA ( 62) GLN110 0 0 0 0 0 16 4 25 0 0 0 ( 63) THR111 0 0 0 0 0 0 5 0 0 0 0 ( 64) GLN112 0 0 0 6 2 6 0 0 0 0 0 (102) TYR150 0 0 0 0 0 0 43 40 0 0 0 (105) ARG153 0 0 0 0 0 0 1 0 0 0 0 (276) ARG332 0 0 0 0 9 0 0 0 0 0 0 (359) PHE415 0 0 0 0 0 0 3 0 0 0 0 (360) SER416 0 0 0 0 0 2 9 1 0 0 0 (361) HIS417 0 0 0 0 0 0 0 4 0 0 0 prot.sequence qasvspyhlfsdvadvtafrsnllswydqekrdlpwrnlakeeansdrrayavwvsevmlQQtQvaTvidyytrwmqkwpklqdlasasleevnqlwsglgYySrgrRlqegarkvveelgghmprtaetlqqllpgvgrytagaiasiafdqvtgvvdgnvlrvlcrvraigadptstlvshhlwnlaqqlvdparpgdfnqaamelgatvctpqrplcshcpvqslcrayqrvqrgqlseecalntrqcqlcltssspwdpsmgvanfprkasRrppreeysatcvveqpgaiggplvllvqrpdsgllaglwefpsvtlepseqhqhkallqelqrwcgplpairlqhlgevihifSHikltyqvyslaldqapastappgarwltweefcnaavstamkkvfrmyedhrq >7eg6_A:Histone-fold; title=SNF5 FINGER HELIX BOUND TO THE NUCLEOSOME organism=? DNA sequence DG(I3):DC(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DT(I145):DA(J3) DG(I146):DC(J2) DA(I147):DT(J1) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger >7eg6_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=SNF5 FINGER HELIX BOUND TO THE NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DG(I3):DC(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DT(I145):DA(J3) DG(I146):DC(J2) DA(I147):DT(J1) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 chainF chainG chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/kvlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvIrdavtytehakrktvtamdvvyalkrqgrtlygfg/akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/trkesyaiyvykvlkqvhpdtgisskamsiMnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/RyRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/RhRkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/AkAktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7eg7_APQRo: title=TFIID-BASED CORE PIC ON SCP PROMOTER organism=SUS SCROFA / HOMO SAPIENS DNA sequence DA(X-39):DT(Y39) DA(X-38):DT(Y38) DG(X-37):DC(Y37) DG(X-36):DC(Y36) DG(X-35):DC(Y35) DC(X-34):DG(Y34) DG(X-33):DC(Y33) DC(X-32):DG(Y32) DC(X-31):DG(Y31) DT(X-30):DA(Y30) DA(X-29):DT(Y29) DT(X-28):DA(Y28) DA(X-27):DT(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DA(X-24):DT(Y24) DG(X-23):DC(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DG(X-20):DC(Y20) DT(X-18):DA(Y18) DG(X-17):DC(Y17) DG(X-16):DC(Y16) DG(X-15):DC(Y15) DG(X-14):DC(Y14) DG(X-13):DC(Y13) DC(X-12):DG(Y12) DG(X-11):DC(Y11) DC(X-10):DG(Y10) DG(X-9):DC(Y9) DT(X-8):DA(Y8) DT(X-7):DA(Y7) DC(X-6):DG(Y6) DG(X-5):DC(Y5) DT(X-4):DA(Y4) DC(X-3):DG(Y3) DC(X-2):DG(Y2) DT(X-1):DA(Y1) DC(X0):DG(Y0) DA(X1):DT(Y-1) DG(X2):DC(Y-2) DT(X3):DA(Y-3) DC(X4):DG(Y-4) DG(X5):DC(Y-5) DC(X6):DG(Y-6) DG(X7):DC(Y-7) DA(X8):DT(Y-8) DT(X9):DA(Y-9) DC(X10):DG(Y-10) DG(X11):DC(Y-11) DA(X12):DT(Y-12) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DA(X15):DT(Y-15) DC(X16):DG(Y-16) DT(X17):DA(Y-17) DC(X18):DG(Y-18) DG(X19):DC(Y-19) DA(X20):DT(Y-20) DG(X21):DC(Y-21) DC(X22):DG(Y-22) DC(X23):DG(Y-23) DG(X24):DC(Y-24) DA(X25):DT(Y-25) DG(X26):DC(Y-26) DC(X27):DG(Y-27) DA(X28):DT(Y-28) DG(X29):DC(Y-29) DA(X30):DT(Y-30) DC(X31):DG(Y-31) chainA (358) SER840 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (362) LYS844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (473) ARG996 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 7) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) PHE288 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) LEU303 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) PHE305 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) THR313 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR (218) ARG286 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaino prot.sequence wrygparlwydmlgvpeddlladenflmvtqlhweddiiwdgepwysifpidnedlvygrwedniiwdaqamprlleppvltldpndenlilpwnlsndeyyypkiiqhsipavelrqpffpthmgpiklrqfhrpplkkysfgalsqpgphsvqpllkhikkkakmreqerqasgggemffmrtpqdltgkdgdlilaeyseengplmmqvgmatkiknyykrkpgkdpgapdckygetvychtspflgslhpgqllqafennlfrapiylhkmpetdfliirtrqgyyirelvdifvvgqqcplfevpgpnskranthirdflqvfiyrlfwkskdrprrirmedikkafpshseSsirKrlklcadfkrtgmdsnwwvlksdfrlpteeeiramvspeqccayysmiaaeqrlkdagddevrtapwnttrafiaamkgkcllevtgvadptgcgegfsyvkipnkdadlRrlslknakqllrkfgvpeeeikklsrwevidvvrtmsterfsvaehqerykeecqrifdlqnkvlsstevlstvtslnssatgrclkiyrtfrdeegkeyvrcetvrkpavidayvrirttkdeef/ivpqlqNivstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmvctgakseeqsrlaarkyarvvqklgfpakfldfkiqnmvgscdvkfpirleglvlthqqfssyepelFpgliyrmikprivlLiFvsgkvvlTgakvraeiyeafeniypilkgfrk/tvpklyRsviedvindvrdiflddgvdeqvlmelktLwenklmqsravdgfHsEeeeeplnseddvsdeegqelfdtenvvvcqydkihrsknkwkfhlkdgimnlngrdyifskaigdaew/vtcpnhpdailvedyragdmicpecglvvgdrvidvgtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtiRqsyrliyprapdlfptdfkfdtpvdklpql/sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrPavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitrhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip >7eg8_APQRT: title=TFIID-BASED CORE PIC ON PUMA PROMOTER organism=HOMO SAPIENS DNA sequence DC(Y-38):DG(X38) DT(Y-37):DA(X37) DC(Y-36):DG(X36) DA(Y-35):DT(X35) DC(Y-34):DG(X34) DC(Y-33):DG(X33) DC(Y-32):DG(X32) DA(Y-31):DT(X31) DA(Y-30):DT(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DG(Y-27):DC(X27) DC(Y-26):DG(X26) DA(Y-25):DT(X25) DA(Y-24):DT(X24) DT(Y-23):DA(X23) DC(Y-22):DG(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DC(Y-19):DG(X19) DT(Y-18):DA(X18) DC(Y-17):DG(X17) DA(Y-16):DT(X16) DC(Y-15):DG(X15) DC(Y-14):DG(X14) DA(Y-13):DT(X13) DG(Y-12):DC(X12) DA(Y-11):DT(X11) DG(Y-10):DC(X10) DT(Y-9):DA(X9) DG(Y-8):DC(X8) DA(Y-7):DT(X7) DC(Y-6):DG(X6) DT(Y-5):DA(X5) DC(Y-4):DG(X4) DA(Y-3):DT(X3) DC(Y-2):DG(X2) DC(Y-1):DG(X1) DT(Y0):DA(X0) DT(Y1):DA(X-1) DC(Y2):DG(X-2) DC(Y3):DG(X-3) DA(Y4):DT(X-4) DG(Y5):DC(X-5) DT(Y6):DA(X-6) DG(Y7):DC(X-7) DC(Y8):DG(X-8) DC(Y9):DG(X-9) DT(Y10):DA(X-10) DA(Y11):DT(X-11) DG(Y12):DC(X-12) DT(Y13):DA(X-13) DG(Y14):DC(X-14) DT(Y15):DA(X-15) DG(Y16):DC(X-16) DG(Y17):DC(X-17) DG(Y18):DC(X-18) DG(Y19):DC(X-19) DC(Y20):DG(X-20) DT(Y21):DA(X-21) DG(Y22):DC(X-22) DG(Y23):DC(X-23) DC(Y24):DG(X-24) DT(Y25):DA(X-25) DG(Y26):DC(X-26) DA(Y27):DT(X-27) DG(Y28):DC(X-28) DT(Y29):DA(X-29) DA(Y30):DT(X-30) DA(Y31):DT(X-31) DG(Y32):DC(X-32) DG(Y33):DC(X-33) DA(Y34):DT(X-34) DT(Y35):DA(X-35) DG(Y36):DC(X-36) DT(Y37):DA(X-37) DC(Y38):DG(X-38) DA(Y39):DT(X-39) DG(Y40):DC(X-40) DA(Y41):DT(X-41) DC(Y42):DG(X-42) DT(Y43):DA(X-43) DT(Y44):DA(X-44) DC(Y45):DG(X-45) DT(Y46):DA(X-46) chainA (361) ARG843 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (362) LYS844 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 7) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR (216) ALA281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (218) VAL283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (219) THR284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (221) ARG286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 chainT (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wrygparlwydmlgvpeddlladenflmvtqlhweddiiwdgepwysifpidnedlvygrwedniiwdaqamprlleppvltldpndenlilpwnlsndeyyypkiiqhsipavelrqpffpthmgpiklrqfhrpplkkysfgalsqpgphsvqpllkhikkkakmreqerqasgggemffmrtpqdltgkdgdlilaeyseengplmmqvgmatkiknyykrkpgkdpgapdckygetvychtspflgslhpgqllqafennlfrapiylhkmpetdfliirtrqgyyirelvdifvvgqqcplfevpgpnskranthirdflqvfiyrlfwkskdrprrirmedikkafpshsessiRKrlklcadfkrtgmdsnwwvlksdfrlpteeeiramvspeqccayysmiaaeqrlkdagddevrtapwnttrafiaamkgkcllevtgvadptgcgegfsyvkipnkdadlrrlslknakqllrkfgvpeeeikklsrwevidvvrtmsterfsvaehqerykeecqrifdlqnkvlsstevlsttasvtslnssatgrclkiyrtfrdeegkeyvrcetvrkpavidayvrirttkdeef/ivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFpgliyrmikprivlliFvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyRsViedvindvrdiflddgvdeqvlmelktLwenklmqsravdgfHsEeeeepLnSeddvsdeegqelfdtenvvvcqydkihrsknkwkFhLkdgimnlngrdyifskaigdaew/vtcpnhpdailvedyragdmicpecglvvgdrvidvgsertmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvAdVTiRqsyrliyprapdlfptdfkfdtpvdklpql/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgkraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgiHkntwelkpe >7eg9_A: title=TFIID-BASED INTERMEDIATE PIC ON SCP PROMOTER organism=HOMO SAPIENS DNA sequence DC(Y-31):DG(X31) DG(Y-30):DC(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DT(Y-27):DA(X27) DG(Y-26):DC(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DC(Y-23):DG(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DT(Y-19):DA(X19) DC(Y-18):DG(X18) DG(Y-17):DC(X17) DA(Y-16):DT(X16) DG(Y-15):DC(X15) DT(Y-14):DA(X14) DG(Y-13):DC(X13) DT(Y-12):DA(X12) DT(Y-11):DA(X11) DC(Y-10):DG(X10) DG(Y-9):DC(X9) DA(Y-8):DT(X8) DC(Y-6):DG(X6) DG(Y-5):DC(X5) DC(Y-4):DG(X4) DG(Y-3):DC(X3) DA(Y-2):DT(X2) DC(Y-1):DG(X1) DT(Y0):DA(X0) DG(Y1):DC(X-1) DA(Y2):DT(X-2) DG(Y3):DC(X-3) DG(Y4):DC(X-4) DA(Y5):DT(X-5) DC(Y6):DG(X-6) DG(Y7):DC(X-7) DA(Y8):DT(X-8) DA(Y9):DT(X-9) DC(Y10):DG(X-10) DG(Y11):DC(X-11) DC(Y12):DG(X-12) DG(Y13):DC(X-13) DC(Y14):DG(X-14) DC(Y15):DG(X-15) DC(Y16):DG(X-16) DC(Y17):DG(X-17) DC(Y18):DG(X-18) DA(Y19):DT(X-19) DC(Y20):DG(X-20) DC(Y21):DG(X-21) DC(Y22):DG(X-22) DC(Y23):DG(X-23) DC(Y24):DG(X-24) DT(Y25):DA(X-25) DT(Y26):DA(X-26) DT(Y27):DA(X-27) DT(Y28):DA(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DA(Y31):DT(X-31) DG(Y32):DC(X-32) DG(Y33):DC(X-33) DC(Y34):DG(X-34) DG(Y35):DC(X-35) DC(Y36):DG(X-36) DC(Y37):DG(X-37) DC(Y38):DG(X-38) DT(Y39):DA(X-39) chainA (358) SER840 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) ARG843 0 0 0 0 9 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (362) LYS844 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) LYS847 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) ARG854 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (500) TRP1023 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wrygparlwydmlgvpeddlladenflmvtqlhweddiiwdgepwysifpidnedlvygrwedniiwdaqamprlleppvltldpndenlilpwnlsndeyyypkiiqhsipavelrqpffpthmgpiklrqfhrpplkkysfgalsqpgphsvqpllkhikkkakmreqerqasgggemffmrtpqdltgkdgdlilaeyseengplmmqvgmatkiknyykrkpgkdpgapdckygetvychtspflgslhpgqllqafennlfrapiylhkmpetdfliirtrqgyyirelvdifvvgqqcplfevpgpnskranthirdflqvfiyrlfwkskdrprrirmedikkafpshseSsiRKrlKlcadfkRtgmdsnwwvlksdfrlpteeeiramvspeqccayysmiaaeqrlkdagddevrtapwnttrafiaamkgkcllevtgvadptgcgegfsyvkipnkdadlrrlslknakqllrkfgvpeeeikklsrWevidvvrtmsterfsvaehqerykeecqrifdlqnkvlsstevlsttasvtslnssatgrclkiyrtfrdeegkeyvrcetvrkpavidayvrirttkdeef >7eg9_ABPQR: title=TFIID-BASED INTERMEDIATE PIC ON SCP PROMOTER organism=HOMO SAPIENS DNA sequence DA(X-39):DT(Y39) DG(X-38):DC(Y38) DG(X-37):DC(Y37) DG(X-36):DC(Y36) DC(X-35):DG(Y35) DG(X-34):DC(Y34) DC(X-33):DG(Y33) DC(X-32):DG(Y32) DT(X-31):DA(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DA(X-28):DT(Y28) DA(X-27):DT(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DG(X-24):DC(Y24) DG(X-23):DC(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DG(X-20):DC(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DG(X-17):DC(Y17) DG(X-16):DC(Y16) DG(X-15):DC(Y15) DG(X-14):DC(Y14) DC(X-13):DG(Y13) DG(X-12):DC(Y12) DC(X-11):DG(Y11) DG(X-10):DC(Y10) DT(X-9):DA(Y9) DT(X-8):DA(Y8) DC(X-7):DG(Y7) DG(X-6):DC(Y6) DT(X-5):DA(Y5) DC(X-4):DG(Y4) DC(X-3):DG(Y3) DT(X-2):DA(Y2) DC(X-1):DG(Y1) DA(X0):DT(Y0) DG(X1):DC(Y-1) DT(X2):DA(Y-2) DC(X3):DG(Y-3) DG(X4):DC(Y-4) DC(X5):DG(Y-5) DG(X6):DC(Y-6) DT(X8):DA(Y-8) DC(X9):DG(Y-9) DG(X10):DC(Y-10) DA(X11):DT(Y-11) DA(X12):DT(Y-12) DC(X13):DG(Y-13) DA(X14):DT(Y-14) DC(X15):DG(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) chainA (358) SER840 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (361) ARG843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 9 0 0 0 0 (362) LYS844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 (365) LYS847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (372) ARG854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 (500) TRP1023 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainP ( 7) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ALA198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) VAL259 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) LEU287 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) PHE288 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) LEU303 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) PHE305 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) VAL311 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) THR313 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR prot.sequence wrygparlwydmlgvpeddlladenflmvtqlhweddiiwdgepwysifpidnedlvygrwedniiwdaqamprlleppvltldpndenlilpwnlsndeyyypkiiqhsipavelrqpffpthmgpiklrqfhrpplkkysfgalsqpgphsvqpllkhikkkakmreqerqasgggemffmrtpqdltgkdgdlilaeyseengplmmqvgmatkiknyykrkpgkdpgapdckygetvychtspflgslhpgqllqafennlfrapiylhkmpetdfliirtrqgyyirelvdifvvgqqcplfevpgpnskranthirdflqvfiyrlfwkskdrprrirmedikkafpshseSsiRKrlKlcadfkRtgmdsnwwvlksdfrlpteeeiramvspeqccayysmiaaeqrlkdagddevrtapwnttrafiaamkgkcllevtgvadptgcgegfsyvkipnkdadlrrlslknakqllrkfgvpeeeikklsrWevidvvrtmsterfsvaehqerykeecqrifdlqnkvlsstevlsttasvtslnssatgrclkiyrtfrdeegkeyvrcetvrkpavidayvrirttkdeef/gfesprpyklthqvvcinninfqrksvvgfveltifptvanlnriklnskqcriyrvrindleaafiyndptlevchseskqrnlnyfsnayaaavsavdpdagngelcikvpselwkhvdelkvlkihinfsldqpkgglhfvvpsvegsmaergahvfscgyqnstrfwfpcvdsyselctwkleftvdaamvavsngdlvetvythdmrkktfhymltiptaasnislaigpfeilvdpymhevthfclpqllpllkhttsylhevfefyeeiltcrypyscfktvfideayvevaayasmsifstnllhsamiidetpltrrclaqslaqqffgcfisrmswsdewvlkgisgYiyGLwmKktfgvnEyrhwikeeldkivayelktggvllhpifnpashlhfsikhphtlsweyysmfqckahlvmrlienrismefmlqvfnkllslastassqkfqshmwsqmlvstsgflksisnvsgkdiqplikqwvdQsgvvkfygsfafnrkrnvleleikqdytspgtqkyvgplkvtvqeldgsfnhtlqieenslkhdipchsksrrnkkkkiplmngeevdmdlsamdadspllwiridpdmsvlrkvefeqadfmwqyqlryerdvvaqqesilalekfptpasrlaltdileqeqcfyrvrmsacfclakiansmvstwtgppamkslftrmfcckscpnivktnnfmsfqsyflqktmpvamallrdvhnlcpkevltfildlikyndnrknkfsdnyyraemidalansvtpavsvnnevrtldnlnpdvrlileeitrflnmekllpsyrhtitvsclrairvlqknghvpsdpalfksyaeyghfvdiriaaleavvdytkvdrsyeelqwllnmiqndpvpyvrhkilnmltknppftknmesplcnealvdqlwklmnsgtshdwrlrcgavdlyftlfglsrpsclp/ivpqlqNiVstvnlgckldlktialrarnaeynpkrFAavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepeLFpgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyRsViedvindvrdiflddgvdeqvlmelktLWenklmqsravdgfHsEeeeepLnSeddvsdeegqelfdtenvvvcqydkihrsknkwkFhLkdgimnlngrdyifskaigdaew/vtcpnhPdAilvedyragdmicpecglvvgdrvidvGTmsssdrammnafkEiTtmadrInLprnivdrtnnlfkqvyeqkslkgrandaiasaclYiAcrqegvprtfkeicavsriskkeigrcFKlilkaletsvdlitTgDfmsrfCsNlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql >7ega_APQRT: title=TFIID-BASED INTERMEDIATE PIC ON PUMA PROMOTER organism=HOMO SAPIENS DNA sequence DC(Y-38):DG(X38) DT(Y-37):DA(X37) DC(Y-36):DG(X36) DA(Y-35):DT(X35) DC(Y-34):DG(X34) DC(Y-33):DG(X33) DC(Y-32):DG(X32) DA(Y-31):DT(X31) DA(Y-30):DT(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DG(Y-27):DC(X27) DC(Y-26):DG(X26) DA(Y-25):DT(X25) DA(Y-24):DT(X24) DT(Y-23):DA(X23) DC(Y-22):DG(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DC(Y-19):DG(X19) DT(Y-18):DA(X18) DC(Y-17):DG(X17) DA(Y-16):DT(X16) DC(Y-14):DG(X15) DA(Y-13):DT(X13) DG(Y-12):DC(X12) DA(Y-11):DT(X11) DG(Y-10):DC(X10) DT(Y-9):DA(X9) DG(Y-8):DC(X8) DA(Y-7):DT(X7) DC(Y-6):DG(X6) DT(Y-5):DA(X5) DC(Y-4):DG(X4) DA(Y-3):DT(X3) DC(Y-2):DG(X2) DC(Y-1):DG(X1) DT(Y0):DA(X0) DT(Y1):DA(X-1) DC(Y2):DG(X-2) DC(Y3):DG(X-3) DA(Y4):DT(X-4) DG(Y5):DC(X-5) DT(Y6):DA(X-6) DG(Y7):DC(X-7) DC(Y8):DG(X-8) DC(Y9):DG(X-9) DT(Y10):DA(X-10) DA(Y11):DT(X-11) DG(Y12):DC(X-12) DT(Y13):DG(X14) DT(Y15):DA(X-15) DG(Y16):DC(X-16) DG(Y17):DC(X-17) DG(Y18):DC(X-18) DG(Y19):DC(X-19) DC(Y20):DG(X-20) DT(Y21):DA(X-21) DG(Y22):DC(X-22) DG(Y23):DC(X-23) DC(Y24):DG(X-24) DT(Y25):DA(X-25) DG(Y26):DC(X-26) DA(Y27):DT(X-27) DG(Y28):DC(X-28) DT(Y29):DA(X-29) DA(Y30):DT(X-30) DA(Y31):DT(X-31) DG(Y32):DC(X-32) DG(Y33):DC(X-33) DA(Y34):DT(X-34) DT(Y35):DA(X-35) DG(Y36):DC(X-36) DT(Y37):DA(X-37) DC(Y38):DG(X-38) DA(Y39):DT(X-39) DG(Y40):DC(X-40) DA(Y41):DT(X-41) DC(Y42):DG(X-42) DT(Y43):DA(X-43) DC(Y45):DG(X-45) DT(Y46):DA(X-46) chainA (361) ARG843 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (362) LYS844 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (473) ARG996 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 7) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR (124) LYS189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) ALA281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (218) VAL283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 (219) THR284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (221) ARG286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 (251) LEU316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wrygparlwydmlgvpeddlladenflmvtqlhweddiiwdgepwysifpidnedlvygrwedniiwdaqamprlleppvltldpndenlilpwnlsndeyyypkiiqhsipavelrqpffpthmgpiklrqfhrpplkkysfgalsqpgphsvqpllkhikkkakmreqerqasgggemffmrtpqdltgkdgdlilaeyseengplmmqvgmatkiknyykrkpgkdpgapdckygetvychtspflgslhpgqllqafennlfrapiylhkmpetdfliirtrqgyyirelvdifvvgqqcplfevpgpnskranthirdflqvfiyrlfwkskdrprrirmedikkafpshsessiRKrlklcadfkrtgmdsnwwvlksdfrlpteeeiramvspeqccayysmiaaeqrlkdagddevrtapwnttrafiaamkgkcllevtgvadptgcgegfsyvkipnkdadlRrlslknakqllrkfgvpeeeikklsrwevidvvrtmsterfsvaehqerykeecqrifdlqnkvlsstevlsttasvtslnssatgrclkiyrtfrdeegkeyvrcetvrkpavidayvrirttkdeef/ivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFpgliyrmikprivllifvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyRsViedvindvrdiflddgvdeqvlmelktLwenklmqsravdgfHsEeeeepLnSeddvsdeegqelfdtenvvvcqydkihrsknkwkFhLkdgimnlngrdyifskaigdaew/vtcpnhpdailvedyragdmicpecglvvgdrvidvgsertmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskKeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvAdVTiRqsyrliyprapdlfptdfkfdtpvdklpqL/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgiHkntwelkpe >7egb_6PQRT: title=TFIID-BASED HOLO PIC ON SCP PROMOTER organism=? DNA sequence DG(X-38):DC(Y38) DG(X-37):DC(Y37) DG(X-36):DC(Y36) DC(X-35):DG(Y35) DG(X-34):DC(Y34) DC(X-33):DG(Y33) DC(X-32):DG(Y32) DT(X-31):DA(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DA(X-28):DT(Y28) DA(X-27):DT(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DG(X-24):DC(Y24) DG(X-23):DC(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DG(X-20):DC(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DG(X-17):DC(Y17) DG(X-16):DC(Y16) DG(X-15):DC(Y15) DG(X-14):DC(Y14) DC(X-13):DG(Y13) DG(X-12):DC(Y12) DC(X-11):DG(Y11) DG(X-10):DC(Y10) DT(X-9):DA(Y9) DT(X-8):DA(Y8) DC(X-7):DG(Y7) DG(X-6):DC(Y6) DT(X-5):DA(Y5) DC(X-4):DG(Y4) DC(X-3):DG(Y3) DT(X-2):DA(Y2) DC(X-1):DG(Y1) DA(X0):DT(Y0) DG(X1):DC(Y-1) DT(X2):DA(Y-2) DC(X3):DG(Y-3) DG(X4):DC(Y-4) DC(X5):DG(Y-5) DG(X6):DC(Y-6) DA(X7):DT(Y-7) DT(X8):DA(Y-8) DC(X9):DG(Y-9) DG(X10):DC(Y-10) DA(X11):DT(Y-11) DA(X12):DT(Y-12) DC(X13):DG(Y-13) DA(X14):DT(Y-14) DC(X15):DG(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) chain6 (303) LYS418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 7) ASN167 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL169 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 16 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ALA198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR222 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN257 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) VAL259 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) PHE288 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) PRO289 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) LEU303 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) PHE305 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) VAL311 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) THR313 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR (215) ALA281 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) VAL283 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) THR284 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) ARG286 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrnseeetqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttKrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaatd/ivpqlqNiVstvnlgckldlktialrarnaeynpkrFAavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyRsViedvindvrdiflddgvdeqvlmelktLWenklmqsravdgfHsEeeeepLnSeddvsdeegqelfdtenvvvcqydkihrsknkwkFhLkdgimnlngrdyifskaigdaew/vtcpnhpdailvedyragdmicpecglvvgdrvidvgsrtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvAdVTiRqsyrliyprapdlfptdfkfdtpvdklpql/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgkraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgiHkntwelkpe >7egb_R:Cyclin-like;Zinc_beta-ribbon; title=TFIID-BASED HOLO PIC ON SCP PROMOTER organism=? DNA sequence DC(Y-28):DG(X28) DT(Y-27):DA(X27) DG(Y-26):DC(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DC(Y-23):DG(X23) DG(Y-22):DC(X22) DC(Y-20):DG(X20) DT(Y-19):DA(X19) DC(Y-18):DG(X18) DG(Y-17):DC(X17) DA(Y-16):DT(X16) DG(Y-15):DC(X15) DT(Y-14):DA(X14) DG(Y-13):DC(X13) DT(Y-12):DA(X12) DT(Y-11):DA(X11) DC(Y-10):DG(X10) DG(Y-9):DC(X9) DA(Y-8):DT(X8) DT(Y-7):DA(X7) DC(Y-6):DG(X6) DG(Y-5):DC(X5) DC(Y-4):DG(X4) DG(Y-3):DC(X3) DA(Y-2):DT(X2) DC(Y-1):DG(X1) DT(Y0):DA(X0) DG(Y1):DC(X-1) DA(Y2):DT(X-2) DG(Y3):DC(X-3) DG(Y4):DC(X-4) DA(Y5):DT(X-5) DC(Y6):DG(X-6) DG(Y7):DC(X-7) DA(Y8):DT(X-8) DA(Y9):DT(X-9) DC(Y10):DG(X-10) DG(Y11):DC(X-11) DC(Y12):DG(X-12) DG(Y13):DC(X-13) DC(Y14):DG(X-14) DC(Y15):DG(X-15) DC(Y16):DG(X-16) DC(Y17):DG(X-17) DC(Y18):DG(X-18) DA(Y19):DT(X-19) DC(Y20):DG(X-20) DC(Y21):DG(X-21) DC(Y22):DG(X-22) DC(Y23):DG(X-23) DC(Y24):DG(X-24) DT(Y25):DA(X-25) DT(Y26):DA(X-26) DT(Y27):DA(X-27) DT(Y28):DA(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DA(Y31):DT(X-31) DG(Y32):DC(X-32) DG(Y33):DC(X-33) DC(Y34):DG(X-34) DG(Y35):DC(X-35) DC(Y36):DG(X-36) DC(Y37):DG(X-37) DC(Y38):DG(X-38) chainR (215) ALA281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (217) VAL283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (218) THR284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (220) ARG286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence vtcpnhpdailvedyragdmicpecglvvgdrvidvgsrtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvAdVTiRqsyrliyprapdlfptdfkfdtpvdklpql >7egc_6PQRTs: title=P53-BOUND TFIID-BASED HOLO PIC ON HDM2 PROMOTER organism=? DNA sequence DC(Y-28):DG(X28) DC(Y-27):DG(X27) DC(Y-26):DG(X26) DA(Y-25):DT(X25) DC(Y-24):DG(X24) DA(Y-23):DT(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DT(Y-20):DA(X20) DC(Y-19):DG(X19) DT(Y-18):DA(X18) DA(Y-17):DT(X17) DC(Y-16):DG(X16) DC(Y-15):DG(X15) DC(Y-14):DG(X14) DT(Y-13):DA(X13) DC(Y-12):DG(X12) DC(Y-11):DG(X11) DA(Y-10):DT(X10) DA(Y-9):DT(X9) DT(Y-8):DA(X8) DC(Y-7):DG(X7) DG(Y-6):DC(X6) DC(Y-5):DG(X5) DC(Y-4):DG(X4) DA(Y-3):DT(X3) DC(Y-2):DG(X2) DT(Y-1):DA(X1) DG(Y0):DC(X0) DA(Y1):DT(X-1) DA(Y2):DT(X-2) DC(Y3):DG(X-3) DA(Y4):DT(X-4) DC(Y5):DG(X-5) DA(Y6):DT(X-6) DG(Y7):DC(X-7) DC(Y8):DG(X-8) DT(Y9):DA(X-9) DG(Y10):DC(X-10) DG(Y11):DC(X-11) DG(Y12):DC(X-12) DA(Y13):DT(X-13) DA(Y14):DT(X-14) DA(Y15):DT(X-15) DA(Y16):DT(X-16) DT(Y17):DA(X-17) DG(Y18):DC(X-18) DC(Y19):DG(X-19) DA(Y20):DT(X-20) DT(Y21):DA(X-21) DG(Y22):DC(X-22) DG(Y23):DC(X-23) DT(Y24):DA(X-24) DT(Y25):DA(X-25) DT(Y26):DA(X-26) DA(Y27):DT(X-27) DA(Y28):DT(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DA(Y31):DT(X-31) DG(Y32):DC(X-32) DC(Y33):DG(X-33) DC(Y34):DG(X-34) DC(Y35):DG(X-35) DC(Y36):DG(X-36) DA(Y37):DT(X-37) DG(Y38):DC(X-38) DC(Y39):DG(X-39) DT(Y40):DA(X-40) DG(Y41):DC(X-41) DG(Y42):DC(X-42) chain6 (362) ILE477 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) LYS528 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 7) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 3 0 0 0 0 0 0 0 0 0 0 0 (129) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (143) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 (145) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (151) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR (217) VAL283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (220) ARG286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (221) GLN287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainT (213) HIS229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chains prot.sequence gakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrnseeetqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkIvdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktKkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaatd/ivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyRsViedvindvrdiflddgvdeqvlmelktLwenklmqsravdgfHsEeeeepLnSeddvsdeegqelfdtenvvvcqydkihrsknkwkFhLkdgimnlngrdyifskaigdaew/vtcpnhpdailvedyragdmicpecglvvgdrvidvgsrtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadVtiRQsyrliyprapdlfptdfkfdtpvdklpql/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgkraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgiHkntwelkpe/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >7egd_ABDPd: title=SCP PROMOTER-BOUND TFIID-TFIIA IN INITIAL TBP-LOADING STATE organism=HOMO SAPIENS DNA sequence DC(Y-39):DG(X39) DG(Y-38):DC(X38) DT(Y-37):DA(X37) DA(Y-36):DT(X36) DG(Y-35):DC(X35) DG(Y-34):DC(X34) DC(Y-33):DG(X33) DA(Y-32):DT(X32) DC(Y-31):DG(X31) DG(Y-30):DC(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DT(Y-27):DA(X27) DG(Y-26):DC(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DC(Y-23):DG(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DT(Y-19):DA(X19) DC(Y-18):DG(X18) DG(Y-17):DC(X17) DA(Y-16):DT(X16) DG(Y-15):DC(X15) DT(Y-14):DA(X14) DG(Y-13):DC(X13) DT(Y-12):DA(X12) DT(Y-11):DA(X11) DC(Y-10):DG(X10) DG(Y-9):DC(X9) DA(Y-8):DT(X8) DT(Y-7):DA(X7) DC(Y-6):DG(X6) DG(Y-5):DC(X5) DC(Y-4):DG(X4) DG(Y-3):DC(X3) DA(Y-2):DT(X2) DC(Y-1):DG(X1) DT(Y0):DA(X0) DG(Y1):DC(X-1) DA(Y2):DT(X-2) DG(Y3):DC(X-3) DG(Y4):DC(X-4) DA(Y5):DT(X-5) DC(Y6):DG(X-6) DG(Y7):DC(X-7) DA(Y8):DT(X-8) DA(Y9):DT(X-9) DC(Y10):DG(X-10) DG(Y11):DC(X-11) DC(Y12):DG(X-12) DG(Y13):DC(X-13) DC(Y14):DG(X-14) DC(Y15):DG(X-15) DC(Y16):DG(X-16) DC(Y17):DG(X-17) DC(Y18):DG(X-18) DA(Y19):DT(X-19) DC(Y20):DG(X-20) DC(Y21):DG(X-21) DC(Y22):DG(X-22) DC(Y23):DG(X-23) DC(Y24):DG(X-24) DT(Y25):DA(X-25) DT(Y26):DA(X-26) DT(Y27):DA(X-27) DT(Y28):DA(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DA(Y31):DT(X-31) DG(Y32):DC(X-32) chainA (361) ARG843 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) ARG854 0 0 0 0 0 0 0 0 0 8 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (499) ARG1022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (500) TRP1023 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (608) GLN1230 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (609) LEU1231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (613) LYS1235 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainD (125) ARG973 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) ARG975 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP chaind prot.sequence wrygparlwydmlgvpeddlladenflmvtqlhweddiiwdgepwysifpidnedlvygrwedniiwdaqamprlleppvltldpndenlilpwnlsndeyyypkiiqhsipavelrqpffpthmgpiklrqfhrpplkkysfgalsqpgphsvqpllkhikkkakmreqerqasgggemffmrtpqdltgkdgdlilaeyseengplmmqvgmatkiknyykrkpgkdpgapdckygetvychtspflgslhpgqllqafennlfrapiylhkmpetdfliirtrqgyyirelvdifvvgqqcplfevpgpnskranthirdflqvfiyrlfwkskdrprrirmedikkafpshsessiRkrlklcadfkRtgmdsnwwvlksdfrlpteeeiramvspeqccayysmiaaeqrlkdagddevrtapwnttrafiaamkgkcllevtgvadptgcgegfsyvkipnkdadlrrlslknakqllrkfgvpeeeikklsRWevidvvrtmsterfsvaehqerykeecqrifdlqnkvlsstevlstdatgrclkiyrtfrdeegkeyvrcetvrkpavidayvrirttkdeefhreemrkerrriqeQLrrlKrnqekek/gfesprpyklthqvvcinninfqrksvvgfveltifptvanlnriklnskqcriyrvrindleaafiyndptlevchseskqrnlnyfsnayaaavsavdpdagngelcikvpselwkhvdelkvlkihinfsldqpkgglhfvvpsvegsmaergahvfscgyqnstrfwfpcvdsyselctwkleftvdaamvavsngdlvetvythdmrkktfhymltiptaasnislaigpfeilvdpymhevthfclpqllpllkhttsylhevfefyeeiltcrypyscfktvfideayvevaayasmsifstnllhsamiidetpltrrclaqslaqqffgcfisrmswsdewvlkgisgyiyGlwmkktfgvnEyrhwikeeldkivayelktggvllhpifnpashlhfsikhphtlsweyysmfqckahlvmrlienrismefmlqvfnkllslastassqkfqshmwsqmlvstsgflksisnvsgkdiqplikqwvDQsgvvkfygsfafnrkrnvleleikqdytspgtqkyvgplkvtvqeldgsfnhtlqieenslkhdipchsksrrnkkkkiplmngeevdmdlsamdadspllwiridpDMsvlRkvefeqadfmwqyqlryerdvvaqqesilalekfptpasrlaltdileqeqcfyrvrmsacfclakiansmvstwtgppamkslftrmfcckscpnivktnnfmsfqsyflqktmpvamallrdvhnlcpkevltfildlikyndnrknkfsdnyyraemidalansvtpavsvnnevrtldnlnpdvrlileeitrflnmekllpsyrhtitvsclrairvlqknghvpsdpalfksyaeyghfvdiriaaleavvdytkvdrsyeelqwllnmiqndpvpyvrhkilnmltknppftknmesplcnealvdqlwklmnsgtshdwrlrcgavdlyftlfglsrpsclp/vasmagvnlseesarilatnsetfllqaplqrrileigkkhgitelhpdvvsyvshatqqrlqnlvekisetaqqknfsykdddryeqasdvraqlkffeqldqiekqrkdeqereilmraaksRsRqedpeqlrlkqkakemqqqelaqmrqrdanltalaaiqritrvnlrdlifcleneretshslllykaflk/ivpqlqnivstvnlgckldlktialrarnaeynpkrfaavimrireprttalifssgkmvctgakseeqsrlaarkyarvvqklgfpakfldfkiqnmvgscdvkfpirleglvlthqqfssyePeLfpgliyrmikprivllifvsgkvvltgakvraeiyeafeniypilkgfrk/sarilatnselvgtltrsckdetfllqaplqrrileigkkhgitelhpdvvsyvshatqqrlqnlvekisetaqqknfsykdddryeqasdvraqlkffeqldqiekqrkdeqereilmrritrVnLrdlifcleneretshslllykaflk >7egd_D:Histone-fold; title=SCP PROMOTER-BOUND TFIID-TFIIA IN INITIAL TBP-LOADING STATE organism=HOMO SAPIENS DNA sequence DC(Y-39):DG(X39) DG(Y-38):DC(X38) DT(Y-37):DA(X37) DA(Y-36):DT(X36) DG(Y-35):DC(X35) DG(Y-34):DC(X34) DC(Y-33):DG(X33) DA(Y-32):DT(X32) DC(Y-31):DG(X31) DG(Y-30):DC(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DT(Y-27):DA(X27) DG(Y-26):DC(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DC(Y-23):DG(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DT(Y-19):DA(X19) DC(Y-18):DG(X18) DG(Y-17):DC(X17) DA(Y-16):DT(X16) DG(Y-15):DC(X15) DT(Y-14):DA(X14) DG(Y-13):DC(X13) DT(Y-12):DA(X12) DT(Y-11):DA(X11) DC(Y-10):DG(X10) DG(Y-9):DC(X9) DA(Y-8):DT(X8) DT(Y-7):DA(X7) DC(Y-6):DG(X6) DG(Y-5):DC(X5) DC(Y-4):DG(X4) DG(Y-3):DC(X3) DA(Y-2):DT(X2) DC(Y-1):DG(X1) DT(Y0):DA(X0) DG(Y1):DC(X-1) DA(Y2):DT(X-2) DG(Y3):DC(X-3) DG(Y4):DC(X-4) DA(Y5):DT(X-5) DC(Y6):DG(X-6) DG(Y7):DC(X-7) DA(Y8):DT(X-8) DA(Y9):DT(X-9) DC(Y10):DG(X-10) DG(Y11):DC(X-11) DC(Y12):DG(X-12) DG(Y13):DC(X-13) DC(Y14):DG(X-14) DC(Y15):DG(X-15) DC(Y16):DG(X-16) DC(Y17):DG(X-17) DC(Y18):DG(X-18) DA(Y19):DT(X-19) DC(Y20):DG(X-20) DC(Y21):DG(X-21) DC(Y22):DG(X-22) DC(Y23):DG(X-23) DC(Y24):DG(X-24) DT(Y25):DA(X-25) DT(Y26):DA(X-26) DT(Y27):DA(X-27) DT(Y28):DA(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DA(Y31):DT(X-31) DG(Y32):DC(X-32) chainD (125) ARG973 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) ARG975 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vasmagvnlseesarilatnsetfllqaplqrrileigkkhgitelhpdvvsyvshatqqrlqnlvekisetaqqknfsykdddryeqasdvraqlkffeqldqiekqrkdeqereilmraaksRsRqedpeqlrlkqkakemqqqelaqmrqrdanltalaaiqritrvnlrdlifcleneretshslllykaflk >7egh_AB: title=TFIID LOBE C SUBCOMPLEX organism=HOMO SAPIENS DNA sequence DT(X37):DA(Y51) DC(X38):DG(Y50) DC(X39):DG(Y49) DT(X40):DA(Y48) DC(X41):DG(Y47) DA(X42):DT(Y46) DG(X43):DC(Y45) DT(X44):DA(Y44) DC(X45):DG(Y43) DG(X46):DC(Y42) DC(X47):DG(Y41) DG(X48):DC(Y40) DA(X49):DT(Y39) DT(X50):DA(Y38) DC(X51):DG(Y37) DG(X52):DC(Y36) DA(X53):DT(Y35) DA(X54):DT(Y34) DC(X55):DG(Y33) DA(X56):DT(Y32) DC(X57):DG(Y31) DT(X58):DA(Y30) DC(X59):DG(Y29) DG(X60):DC(Y28) DA(X61):DT(Y27) DG(X62):DC(Y26) DC(X63):DG(Y25) DC(X64):DG(Y24) DG(X65):DC(Y23) DA(X66):DT(Y22) DG(X67):DC(Y21) DC(X68):DG(Y20) DA(X69):DT(Y19) DG(X70):DC(Y18) DA(X71):DT(Y17) DC(X72):DG(Y16) DG(X73):DC(Y15) DT(X74):DA(Y14) DG(X75):DC(Y13) DC(X76):DG(Y12) DC(X77):DG(Y11) DT(X78):DA(Y10) DA(X79):DT(Y9) DC(X80):DG(Y8) DG(X81):DC(Y7) chainA (371) ARG843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 (382) ARG854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 8 0 0 0 0 0 0 0 0 0 (509) ARG1022 0 0 0 0 5 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (510) TRP1023 0 0 0 0 7 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (618) GLN1230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (619) LEU1231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (623) LYS1235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chainB prot.sequence dtkprvaewrygparlwydmlgvpedgsdlladenflmvtqlhweddiiwdgepwysifpidnedlvygrwedniiwdaqamprlleppvltldpndenlilpwnlsndeyyypkiiqhsipavelrqpffpthmgpiklrqfhrpplkkysfgalsqpgphsvqpllkhikkkakmreqerqasgggemffmrtpqdltgkdgdlilaeyseengplmmqvgmatkiknyykrkpgkdpgapdckygetvychtspflgslhpgqllqafennlfrapiylhkmpetdfliirtrqgyyirelvdifvvgqqcplfevpgpnskranthirdflqvfiyrlfwkskdrprrirmedikkafpshsessiRkrlklcadfkRtgmdsnwwvlksdfrlpteeeiramvspeqccayysmiaaeqrlkdagddevrtapwnttrafiaamkgkcllevtgvadptgcgegfsyvkipnkdadlrrlslknakqllrkfgvpeeeikklsRWevidvvrtmsterfsvaehqerykeecqrifdlqnkvlsstevlstdatgrclkiyrtfrdeegkeyvrcetvrkpavidayvrirttkdeefhreemrkerrriqeQLrrlKrnqekek/gfesprpyklthqvvcinninfqrksvvgfveltifptvanlnriklnskqcriyrvrindleaafiyndptlevchseskqrnlnyfsnayaaavsavdpdagngelcikvpselwkhvdelkvlkihinfsldqpkgglhfvvpsvegsmaergahvfscgyqnstrfwfpcvdsyselctwkleftvdaamvavsngdlvetvythdmrkktfhymltiptaasnislaigpfeilvdpymhevthfclpqllpllkhttsylhevfefyeeiltcrypyscfktvfideayvevaayasmsifstnllhsamiidetpltrrclaqslaqqffgcfisrmswsdewvlkgisgyiyglwmkktfgvNeyrhwikeelDkivayelktggvllhpifnpashlhfsikhphtlsweyysmfqckahlvmrlienrismefmlqvfnkllslastassqkfqshmwsqmlvstsgflksisnvsgkdiqplikqwvdqsgvvkfygSFafnrkrnvleleikqdytspgtqkyvgplkvtvqeldgsfnhtlqieenslkhdipchsksrrnkkkkiplmngeevdmdlsamdadspllwiridpdmsvlrkvefEQadfMwqyqlryerdvvaqqesilalekfptpasrlaltdileqeqcfyrvrmsacfclakiansmvstwtgppamkslftrmfcckscpnivktnnfmsfqsyflqktmpvamallrdvhnlcpkevltfildlikyndnrknkfsdnyyraemidalansvtpavsvnnevrtldnlnpdvrlileeitrflnmekllpsyrhtitvsclrairvlqknghvpsdpalfksyaeyghfvdiriaaleavvdytkvdrsyeelqwllnmiqndpvpyvrhkilnmltknppftknmesplcnealvdqlwklmnsgtshdwrlrcgavdlyftlfglsrpsclp >7egj_ABDPQ: title=SCP PROMOTER-BOUND TFIID-TFIIA IN POST TBP-LOADING STATE organism=HOMO SAPIENS DNA sequence DC(Y-40):DG(X40) DC(Y-39):DG(X39) DG(Y-38):DC(X38) DT(Y-37):DA(X37) DA(Y-36):DT(X36) DG(Y-35):DC(X35) DG(Y-34):DC(X34) DC(Y-33):DG(X33) DA(Y-32):DT(X32) DC(Y-31):DG(X31) DG(Y-30):DC(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DT(Y-27):DA(X27) DG(Y-26):DC(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DC(Y-23):DG(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DT(Y-19):DA(X19) DC(Y-18):DG(X18) DG(Y-17):DC(X17) DA(Y-16):DT(X16) DG(Y-15):DC(X15) DT(Y-14):DA(X14) DG(Y-13):DC(X13) DT(Y-12):DA(X12) DT(Y-11):DA(X11) DC(Y-10):DG(X10) DG(Y-9):DC(X9) DA(Y-8):DT(X8) DT(Y-7):DA(X7) DC(Y-6):DG(X6) DG(Y-5):DC(X5) DC(Y-4):DG(X4) DG(Y-3):DC(X3) DA(Y-2):DT(X2) DC(Y-1):DG(X1) DT(Y0):DA(X0) DG(Y1):DC(X-1) DA(Y2):DT(X-2) DG(Y3):DC(X-3) DG(Y4):DC(X-4) DA(Y5):DT(X-5) DC(Y6):DG(X-6) DG(Y7):DC(X-7) DA(Y8):DT(X-8) DA(Y9):DT(X-9) DC(Y10):DG(X-10) DG(Y11):DC(X-11) DC(Y12):DG(X-12) DG(Y13):DC(X-13) DC(Y14):DG(X-14) DC(Y15):DG(X-15) DC(Y16):DG(X-16) DC(Y17):DG(X-17) DC(Y18):DG(X-18) DA(Y19):DT(X-19) DC(Y20):DG(X-20) DC(Y21):DG(X-21) DC(Y22):DG(X-22) DC(Y23):DG(X-23) DC(Y24):DG(X-24) DT(Y25):DA(X-25) DT(Y26):DA(X-26) DT(Y27):DA(X-27) DT(Y28):DA(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DA(Y31):DT(X-31) DG(Y32):DC(X-32) DG(Y33):DC(X-33) chainA (358) SER840 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) ARG843 0 0 0 0 0 0 0 0 0 0 0 0 0 15 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (362) LYS844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) ARG854 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (499) ARG1022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (605) ILE1227 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (609) LEU1231 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (613) LYS1235 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainD chainP chainQ ( 69) ARG344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 70) SER345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 ( 71) LYS346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 7 1 0 0 ( 72) ASN347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence wrygparlwydmlgvpeddlladenflmvtqlhweddiiwdgepwysifpidnedlvygrwedniiwdaqamprlleppvltldpndenlilpwnlsndeyyypkiiqhsipavelrqpffpthmgpiklrqfhrpplkkysfgalsqpgphsvqpllkhikkkakmreqerqasgggemffmrtpqdltgkdgdlilaeyseengplmmqvgmatkiknyykrkpgkdpgapdckygetvychtspflgslhpgqllqafennlfrapiylhkmpetdfliirtrqgyyirelvdifvvgqqcplfevpgpnskranthirdflqvfiyrlfwkskdrprrirmedikkafpshseSsiRKrlklcadfkRtgmdsnwwvlksdfrlpteeeiramvspeqccayysmiaaeqrlkdagddevrtapwnttrafiaamkgkcllevtgvadptgcgegfsyvkipnkdadlrrlslknakqllrkfgvpeeeikklsRwevidvvrtmsterfsvaehqerykeecqrifdlqnkvlsstevlstdatgrclkiyrtfrdeegkeyvrcetvrkpavidayvrirttkdeefhreemrkerrrIqeqLrrlKrnqekek/gfesprpyklthqvvcinninfqrksvvgfveltifptvanlnriklnskqcriyrvrindleaafiyndptlevchseskqrnlnyfsnayaaavsavdpdagngelcikvpselwkhvdelkvlkihinfsldqpkgglhfvvpsvegsmaergahvfscgyqnstrfwfpcvdsyselctwkleftvdaamvavsngdlvetvythdmrkktfhymltiptaasnislaigpfeilvdpymhevthfclpqllpllkhttsylhevfefyeeiltcrypyscfktvfideayvevaayasmsifstnllhsamiidetpltrrclaqslaqqffgcfisrmswsdewvlkgisgYiyGLwmkktfgvnEyrhwikeeldkivayelktggvllhpifnpashlhfsikhphtlsweyysmfqckahlvmrlienrismefmlqvfnkllslastassqkfqshmwsqmlvstsgflksisnvsgkdiqplikqwvDqsgvvkfygsfafnrkrnvleleikqdytspgtqkyvgplkvtvqeldgsfnhtlqieenslkhdipchsksrrnkkkkiplmngeevdmdlsamdadspllwirIdpdMsvlRkvefeqadfmwqyqlryerdvvaqqesilalekfptpasrlaltdileqeqcfyrvrmsacfclakiansmvstwtgppamkslftrmfcckscpnivktnnfmsfqsyflqktmpvamallrdvhnlcpkevltfildlikyndnrknkfsdnyyraemidalansvtpavsvnnevrtldnlnpdvrlileeitrflnmekllpsyrhtitvsclrairvlqknghvpsdpalfksyaeyghfvdiriaaleavvdytkvdrsyeelqwllnmiqndpvpyvrhkilnmltknppftknmesplcnealvdqlwklmnsgtshdwrlrcgavdlyftlfglsrpsclp/vasmagvnlseesarilatnsetfllqaplqrrileigkkhgitelhpdvvsyvshatqqrlqnlvekisetaqqknfsykdddryeqasdvraqlkffeqldqiekqrkdeqereilmraaksrsrqedpeqlrlkqkakemqqqelaqmrqrdanltalaaqritrvnlrdlifcleneretshslllykaflk/ivpqlqnivstvnlgckldlktialrarnaeynpkrfaavimrireprttalifssgkmvctgakseeqsrlaarkyarvvqklgfpakfldfkiqnmvgscdvkfpirleglvlthqqfssyepelfpgliyrmikprivllifvsgkvvltgakvraeiyeafeniypilkgfrk/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmqsravdgfhseetenvvvcqydkihRSKNkwkfhlkdgimnlngrdyifskaigdaew >7egp_S:Histone-fold; title=THE STRUCTURE OF SWI/SNF-NUCLEOSOME COMPLEX organism=? DNA sequence DC(X-19):DG(W167) DT(X-18):DA(W166) DA(X-17):DT(W165) DG(X-16):DC(W164) DT(X-15):DA(W163) DA(X-14):DT(W162) DC(X-13):DG(W161) DT(X-12):DA(W160) DT(X-11):DA(W159) DC(X-10):DG(W158) DT(X-9):DA(W157) DC(X-8):DG(W156) DG(X-7):DC(W155) DA(X-6):DT(W154) DC(X-5):DG(W153) DA(X-4):DT(W152) DA(X-3):DT(W151) DG(X-2):DC(W150) DC(X-1):DG(W149) DT(X0):DA(W148) DT(X1):DA(W147) DC(X2):DG(W146) DA(X3):DT(W145) DG(X4):DC(W144) DG(X5):DC(W143) DA(X6):DT(W142) DT(X7):DA(W141) DG(X8):DC(W140) DT(X9):DA(W139) DA(X10):DT(W138) DT(X11):DA(W137) DA(X12):DT(W136) DT(X13):DA(W135) DA(X14):DT(W134) DT(X15):DA(W133) DC(X16):DG(W132) DT(X17):DA(W131) DG(X18):DC(W130) DA(X19):DT(W129) DC(X20):DG(W128) DA(X21):DT(W127) DC(X22):DG(W126) DG(X23):DC(W125) DT(X24):DA(W124) DG(X25):DC(W123) DC(X26):DG(W122) DC(X27):DG(W121) DT(X28):DA(W120) DG(X29):DC(W119) DG(X30):DC(W118) DA(X31):DT(W117) DG(X32):DC(W116) DA(X33):DT(W115) DC(X34):DG(W114) DT(X35):DA(W113) DA(X36):DT(W112) DG(X37):DC(W111) DG(X38):DC(W110) DG(X39):DC(W109) DA(X40):DT(W108) DG(X41):DC(W107) DT(X42):DA(W106) DA(X43):DT(W105) DA(X44):DT(W104) DT(X45):DA(W103) DC(X46):DG(W102) DC(X47):DG(W101) DC(X48):DG(W100) DC(X49):DG(W99) DT(X50):DA(W98) DT(X51):DA(W97) DG(X53):DC(W96) DC(X54):DG(W94) DG(X55):DC(W93) DG(X56):DC(W92) DT(X57):DA(W91) DT(X58):DA(W90) DA(X59):DT(W89) DA(X61):DT(W88) DA(X62):DT(W87) DC(X63):DG(W85) DG(X64):DC(W84) DC(X65):DG(W83) DG(X66):DC(W82) DG(X67):DC(W81) DG(X68):DC(W80) DG(X69):DC(W79) DG(X70):DC(W78) DA(X71):DT(W77) DC(X72):DG(W76) DA(X73):DT(W75) DG(X74):DC(W74) DC(X75):DG(W73) DG(X76):DC(W72) DC(X77):DG(W71) DG(X78):DC(W70) DT(X79):DA(W69) DA(X80):DT(W68) DC(X81):DG(W67) DG(X82):DC(W66) DT(X83):DA(W65) DG(X84):DC(W64) DC(X85):DG(W63) DG(X86):DC(W62) DT(X87):DA(W61) DT(X88):DA(W60) DT(X89):DA(W59) DA(X90):DT(W58) DG(X92):DT(W57) DC(X93):DC(W56) DG(X95):DC(W54) DT(X96):DA(W52) DG(X97):DC(W51) DC(X98):DG(W50) DT(X99):DA(W49) DA(X100):DT(W48) DG(X101):DC(W47) DA(X102):DT(W46) DG(X103):DC(W45) DC(X104):DG(W44) DT(X105):DA(W43) DG(X106):DC(W42) DT(X107):DA(W41) DC(X108):DG(W40) DT(X109):DA(W39) DA(X110):DT(W38) DC(X111):DG(W37) DG(X112):DC(W36) DA(X113):DT(W35) DC(X114):DG(W34) DC(X115):DG(W33) DA(X116):DT(W32) DA(X117):DT(W31) DT(X118):DA(W30) DT(X119):DA(W29) DG(X120):DC(W28) DA(X121):DT(W27) DG(X122):DC(W26) DC(X123):DG(W25) DG(X124):DC(W24) DG(X125):DC(W23) DC(X126):DG(W22) DC(X127):DG(W21) DT(X128):DA(W20) DC(X129):DG(W19) DG(X130):DC(W18) DG(X131):DC(W17) DC(X132):DG(W16) DA(X133):DT(W15) DC(X134):DG(W14) DC(X135):DG(W13) DG(X136):DC(W12) DG(X137):DC(W11) DG(X138):DC(W10) DA(X139):DT(W9) DT(X140):DA(W8) DT(X141):DA(W7) DC(X142):DG(W6) DT(X143):DA(W5) DC(X144):DG(W4) DC(X145):DG(W3) chainS ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 19 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RyrPgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger >7eh0_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THERMUS THERMOPHILUS RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX CONTAINING A TEMPLATE-STRAND PURINE AT POSITION TSS-2, UPA RNA PRIMER AND CMPCPP organism=? DNA sequence DT(H3):DA(G25) DG(H4):DC(G24) DC(H5):DG(G23) DA(H6):DT(G22) DT(H7):DA(G21) DC(H8):DG(G20) DC(H9):DG(G19) DG(H10):DC(G18) DT(H11):DA(G17) DG(H12):DC(G16) DA(H13):DT(G15) DG(H14):DG(G14) DT(H15):DT(G13) DA(H16):DC(G12) DA(H17):DG(G11) DA(H18):DA(G10) DG(H19):DG(G9) chainC (136) ARG142 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 (161) LYS167 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 (164) PRO170 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (165) TRP171 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 (181) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 (182) LYS188 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (237) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 (250) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 (254) LEU260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (260) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 3 0 (319) ILE325 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (320) ASP326 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 (325) ARG331 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (412) LEU418 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (420) ASP426 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (421) VAL427 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpKrgPWidlevepngvvsmkvNKrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavaYvygLiadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtreRagfDVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask >7eh0_CDF: title=THERMUS THERMOPHILUS RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX CONTAINING A TEMPLATE-STRAND PURINE AT POSITION TSS-2, UPA RNA PRIMER AND CMPCPP organism=THERMUS THERMOPHILUS HB8 DNA sequence DG(G9):DG(H19) DA(G10):DA(H18) DG(G11):DA(H17) DC(G12):DA(H16) DT(G13):DT(H15) DG(G14):DG(H14) DT(G15):DA(H13) DC(G16):DG(H12) DA(G17):DT(H11) DC(G18):DG(H10) DG(G19):DC(H9) DG(G20):DC(H8) DA(G21):DT(H7) DT(G22):DA(H6) DG(G23):DC(H5) DC(G24):DG(H4) DA(G25):DT(H3) chainC (136) ARG142 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 (161) LYS167 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) PRO170 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (165) TRP171 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 (181) ASN187 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) LYS188 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (237) ARG243 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) TYR256 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) LEU260 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ARG266 0 3 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ILE325 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (320) ASP326 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 (325) ARG331 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (412) LEU418 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (416) ARG422 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (420) ASP426 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (421) VAL427 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 chainD (703) ALA705 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (704) PRO706 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (1086) THR1088 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 chainF ( 2) ASP79 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG82 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ILE321 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) GLU324 5 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ASP326 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) SER327 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) PHE332 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpKrgPWidlevepngvvsmkvNKrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavaYvygLiadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtreRagfDVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpvRqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdEkDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >7eh1_CDF: title=THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX CONTAINING A TEMPLATE-STRAND PURINE AT POSITION TSS-2, GPG RNA PRIMER, AND CMPCPP organism=THERMUS THERMOPHILUS HB8 DNA sequence DT(H3):DA(G25) DG(H4):DC(G24) DC(H5):DG(G23) DA(H6):DT(G22) DT(H7):DA(G21) DC(H8):DG(G20) DC(H9):DG(G19) DG(H10):DC(G18) DT(H11):DA(G17) DG(H12):DC(G16) DA(H13):DT(G15) DG(H14):DG(G14) DC(H15):DT(G13) DC(H16):DC(G12) DA(H17):DG(G11) DA(H18):DA(G10) DG(H19):DG(G9) chainC (136) ARG142 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 (161) LYS167 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 (164) PRO170 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (165) TRP171 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 (181) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 (182) LYS188 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (237) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 (250) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 (254) LEU260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (260) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 (319) ILE325 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (320) ASP326 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (325) ARG331 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (412) LEU418 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 (415) GLU421 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (420) ASP426 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (421) VAL427 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 chainD (703) ALA705 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (704) PRO706 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chainF ( 2) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 5) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (244) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (247) GLU324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 6 (249) ASP326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 5 (250) SER327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (255) PHE332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplpKrgPWidlevepngvvsmkvNKrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavaYvygLiadprRydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnRrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtrEragfDVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sDpvRqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdEkDSfygdFipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >7eh1_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX CONTAINING A TEMPLATE-STRAND PURINE AT POSITION TSS-2, GPG RNA PRIMER, AND CMPCPP organism=? DNA sequence DT(H3):DA(G25) DG(H4):DC(G24) DC(H5):DG(G23) DA(H6):DT(G22) DT(H7):DA(G21) DC(H8):DG(G20) DC(H9):DG(G19) DG(H10):DC(G18) DT(H11):DA(G17) DG(H12):DC(G16) DA(H13):DT(G15) DG(H14):DG(G14) DC(H15):DT(G13) DC(H16):DC(G12) DA(H17):DG(G11) DA(H18):DA(G10) DG(H19):DG(G9) chainD (703) ALA705 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (704) PRO706 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 (1086) THR1088 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (1087) ALA1089 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea >7eh2_CDF: title=THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX CONTAINING A TEMPLATE-STRAND PYRIMIDINE AT POSITION TSS-2 AND GPG RNA PRIMER organism=THERMUS THERMOPHILUS HB8 DNA sequence DG(H4):DC(G24) DC(H5):DG(G23) DA(H6):DT(G22) DT(H7):DA(G21) DC(H8):DG(G20) DC(H9):DG(G19) DG(H10):DC(G18) DT(H11):DA(G17) DG(H12):DC(G16) DA(H13):DT(G15) chainC (414) GLU421 0 0 0 0 0 0 0 0 0 12 (415) ARG422 0 0 0 0 0 0 0 0 0 5 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvAPgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >7eh2_M:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX CONTAINING A TEMPLATE-STRAND PYRIMIDINE AT POSITION TSS-2 AND GPG RNA PRIMER organism=? DNA sequence DT(J15):DA(Q13) DC(J16):DG(Q12) DA(J17):DT(Q11) DC(J18):DG(Q10) DG(J19):DC(Q9) DG(J20):DC(Q8) DA(J21):DT(Q7) DT(J22):DA(Q6) DG(J23):DC(Q5) DC(J24):DG(Q4) chainM (414) GLU421 7 0 0 0 0 0 0 0 0 0 (415) ARG422 5 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask >7eh2_MNP: title=THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX CONTAINING A TEMPLATE-STRAND PYRIMIDINE AT POSITION TSS-2 AND GPG RNA PRIMER organism=THERMUS THERMOPHILUS HB8 DNA sequence DG(Q4):DC(J24) DC(Q5):DG(J23) DA(Q6):DT(J22) DT(Q7):DA(J21) DC(Q8):DG(J20) DC(Q9):DG(J19) DG(Q10):DC(J18) DT(Q11):DA(J17) DG(Q12):DC(J16) DA(Q13):DT(J15) chainM (414) GLU421 0 0 0 0 0 0 0 0 0 7 (415) ARG422 0 0 0 0 0 0 0 0 0 5 chainN chainP prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvAPgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/tsdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >7ej7_ABC:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=YEAST DMC1 POST-SYNAPTIC COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(E1):DT(D9) DA(E2):DT(D8) DA(E3):DT(D7) DA(E4):DT(D6) DA(E5):DT(D5) DA(E6):DT(D4) DA(E7):DT(D3) DA(E8):DT(D2) DA(E9):DT(D1) chainB (214) ARG229 0 0 0 0 0 54 14 0 0 (217) LEU232 0 0 0 0 0 4 3 0 0 (218) SER233 0 0 0 0 0 0 3 3 0 (249) GLN264 0 0 0 5 0 0 0 0 0 (250) SER265 0 0 14 0 0 0 0 0 0 (251) ASP266 0 0 0 2 0 0 0 0 0 (252) PRO267 0 0 14 23 0 0 0 0 0 (262) ASP277 0 0 2 0 0 0 0 0 0 (265) LYS280 0 0 0 3 0 0 0 0 0 chainA (214) ARG229 0 0 0 0 0 0 0 0 31 (217) LEU232 0 0 0 0 0 0 0 0 2 (249) GLN264 0 0 0 0 0 0 5 0 0 (250) SER265 0 0 0 0 0 14 0 0 0 (251) ASP266 0 0 0 0 0 0 2 0 0 (252) PRO267 0 0 0 0 0 12 21 0 0 (262) ASP277 0 0 0 0 0 2 0 0 0 (265) LYS280 0 0 0 0 0 0 3 0 0 chainC (214) ARG229 0 0 56 16 0 0 0 0 0 (217) LEU232 0 0 4 3 0 0 0 0 0 (218) SER233 0 0 0 3 3 0 0 0 0 (249) GLN264 5 0 0 0 0 0 0 0 0 (251) ASP266 1 0 0 0 0 0 0 0 0 (252) PRO267 21 0 0 0 0 0 0 0 0 (265) LYS280 3 0 0 0 0 0 0 0 0 prot.sequence ilsvdelqnyginasdlqklksggiytvntvlsttrrhlckikglsevkvekikeaagkiiqvgfipatvqldirqrvyslstgskqldsilgggimtmsitevfgefrcgktqmshtlcvttqlpremgggegkvayidtegtfrperikqiaegyeldpesclanvsyaralnsehqmelveqlgeelssgdyrlivvdsimanfrvdycgRgeLserqqklnqhlfklnrlaeefnvavfltnqvQSDPgasalfasaDgrKpigghvlahasatrillrkgrgdervaklqdspdmpekecvyvigekgitd/ilsvdelqnyginasdlqklksggiytvntvlsttrrhlckikglsevkvekikeaagkiiqvgfipatvqldirqrvyslstgskqldsilgggimtmsitevfgefrcgktqmshtlcvttqlpremgggegkvayidtegtfrperikqiaegyeldpesclanvsyaralnsehqmelveqlgeelssgdyrlivvdsimanfrvdycgRgeLSerqqklnqhlfklnrlaeefnvavfltnqvQSDPgasalfasaDgrKpigghvlahasatrillrkgrgdervaklqdspdmpekecvyvigekgitd/ilsvdelqnyginasdlqklksggiytvntvlsttrrhlckikglsevkvekikeaagkiiqvgfipatvqldirqrvyslstgskqldsilgggimtmsitevfgefrcgktqmshtlcvttqlpremgggegkvayidtegtfrperikqiaegyeldpesclanvsyaralnsehqmelveqlgeelssgdyrlivvdsimanfrvdycgRgeLSerqqklnqhlfklnrlaeefnvavfltnqvQsDPgasalfasadgrKpigghvlahasatrillrkgrgdervaklqdspdmpekecvyvigekgitd >7ej7_B:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=YEAST DMC1 POST-SYNAPTIC COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(E1):DT(D9) DA(E2):DT(D8) DA(E3):DT(D7) DA(E4):DT(D6) DA(E5):DT(D5) DA(E6):DT(D4) DA(E7):DT(D3) DA(E8):DT(D2) DA(E9):DT(D1) chainB (214) ARG229 0 0 0 0 0 54 14 0 0 (217) LEU232 0 0 0 0 0 4 3 0 0 (218) SER233 0 0 0 0 0 0 3 3 0 (249) GLN264 0 0 0 5 0 0 0 0 0 (250) SER265 0 0 14 0 0 0 0 0 0 (251) ASP266 0 0 0 2 0 0 0 0 0 (252) PRO267 0 0 14 23 0 0 0 0 0 (262) ASP277 0 0 2 0 0 0 0 0 0 (265) LYS280 0 0 0 3 0 0 0 0 0 prot.sequence ilsvdelqnyginasdlqklksggiytvntvlsttrrhlckikglsevkvekikeaagkiiqvgfipatvqldirqrvyslstgskqldsilgggimtmsitevfgefrcgktqmshtlcvttqlpremgggegkvayidtegtfrperikqiaegyeldpesclanvsyaralnsehqmelveqlgeelssgdyrlivvdsimanfrvdycgRgeLSerqqklnqhlfklnrlaeefnvavfltnqvQSDPgasalfasaDgrKpigghvlahasatrillrkgrgdervaklqdspdmpekecvyvigekgitd >7eje_ABC:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=HUMAN RAD51 POST-SYNAPTIC COMPLEX organism=HOMO SAPIENS DNA sequence DT(D1):DA(E9) DT(D2):DA(E8) DT(D3):DA(E7) DT(D4):DA(E6) DT(D5):DA(E5) DT(D6):DA(E4) DT(D7):DA(E3) DT(D8):DA(E2) DT(D9):DA(E1) chainA (214) ARG235 0 0 31 0 0 0 0 0 0 (217) LEU238 0 0 5 1 0 0 0 0 0 (218) SER239 0 1 2 0 0 0 0 0 0 (251) GLN272 0 0 0 0 0 2 0 0 0 (252) VAL273 0 0 0 0 0 8 8 0 0 (253) ASP274 0 0 0 0 0 12 4 0 0 (258) PRO283 0 0 0 0 0 0 1 0 0 chainB (214) ARG235 0 0 0 0 0 32 0 0 0 (217) LEU238 0 0 0 0 0 5 1 0 0 (218) SER239 0 0 0 0 1 1 0 0 0 (252) VAL273 0 0 0 0 0 0 0 0 12 (253) ASP274 0 0 0 0 0 0 0 0 13 chainC (214) ARG235 0 0 0 0 0 0 0 0 32 (217) LEU238 0 0 0 0 0 0 0 0 5 (218) SER239 0 0 0 0 0 0 0 1 1 prot.sequence pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvvaQVDgaadPkkpiggniiahasttrlylrkgrgetricqiydspclpeaeamfainadgvgd/pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvvaqVDgaadpkkpiggniiahasttrlylrkgrgetricqiydspclpeaeamfainadgvgd/pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvvaqvdgaadpkkpiggniiahasttrlylrkgrgetricqiydspclpeaeamfainadgvgd >7eje_B:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=HUMAN RAD51 POST-SYNAPTIC COMPLEX organism=? DNA sequence DA(E1):DT(D9) DA(E2):DT(D8) DA(E3):DT(D7) DA(E4):DT(D6) DA(E5):DT(D5) DA(E6):DT(D4) DA(E7):DT(D3) DA(E8):DT(D2) DA(E9):DT(D1) chainB (214) ARG235 0 0 0 32 0 0 0 0 0 (217) LEU238 0 0 1 5 0 0 0 0 0 (218) SER239 0 0 0 1 1 0 0 0 0 (252) VAL273 12 0 0 0 0 0 0 0 0 (253) ASP274 13 0 0 0 0 0 0 0 0 prot.sequence pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvvaqVDgaadpkkpiggniiahasttrlylrkgrgetricqiydspclpeaeamfainadgvgd >7el1_A:Ribonuclease_H-like; title=STRUCTURE OF A PROTEIN FROM BACTERIA organism=STAPHYLOCOCCUS AUREUS DNA sequence DT(D1):DA(C8) DT(D2):DA(C7) DG(D3):DC(C6) DA(D4):DT(C5) DA(D5):DT(C4) DT(D6):DA(C3) DA(D7):DT(C2) DG(D8):DC(C1) chainA (966) ASN985 0 0 2 7 0 0 0 0 (967) ASN986 0 0 0 0 2 0 0 0 (970) LEU989 0 0 0 0 0 1 0 0 (972) ARG991 0 0 0 0 4 9 6 1 (994) PRO1013 0 0 0 0 2 1 0 0 (996) ARG1015 0 20 12 5 0 0 0 0 prot.sequence rnyilgldigitsvgygiidyetrdvidagvrlfkeanvennegrrskrgarrlkrrrrhriqrvkkllfdynlltdhselsginpyearvkglsqklseeefsaallhlakrrgvhnvneveedtgnelstkeqisrnskaleekyvaelqlerlkkdgevrgsinrfktsdyvkeakqllkvqkayhqldqsfidtyidlletrrtyyegpgegspfgwkdikewyemlmghctyfpeelrsvkyaynadlynalndlnnlvitrdenekleyyekfqiienvfkqkkkptlkqiakeilvneedikgyrvtstgkpeftnlkvyhdikditarkeiienaelldqiakiltiyqssediqeeltnlnseltqeeieqisnlkgytgthnlslkainlildelwhtndnqiaifnrlklvpkkvdlsqqkeipttlvddfilspvvkrsfiqsikvinaiikkyglpndiiielareknskdaqkminemqkrnrqtnerieeiirttgkenakyliekiklhdmqegkclysleaipledllnnpfnyevdhiiprsvsfdnsfnnkvlvkqeeaskkgnrtpfqylsssdskisyetfkkhilnlakgkgrisktkkeylleerdinrfsvqkdfinrnlvdtryatrglmnllrsyfrvnnldvkvksinggftsflrrkwkfkkernkgykhhaedaliianadfifkewkkldkapeieteqeykeifitphqikhikdfkdykyshrvdkkpnrelindtlystrkddkgntlivnnlnglydkdndklkklinkspekllmyhhdpqtyqklklimeqygdeknplykyyeetgnyltkyskkdngpvikkikyygNklnahlditddypnsrnkvvklslkpyrfdvyldngvykfvtvknldvikkenyyevnskayeeakklkkisnqaefiasfynndlikingelyrvigvNNdlLnRievnmidityreylenmndkrPpRiiktiasktqsikkystdilgnlyevkskkhpqiikk >7el3_AB:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HPAR-DNA COMPLEX FROM ACINETOBACTER BAUMANNII organism=Acinetobacter baumannii DNA sequence DA(D1):DT(C23) DT(D2):DA(C22) DT(D3):DA(C21) DA(D4):DT(C20) DG(D5):DC(C19) DT(D6):DA(C18) DT(D7):DA(C17) DA(D8):DT(C16) DA(D9):DT(C15) DC(D10):DG(C14) DA(D11):DT(C13) DT(D12):DA(C12) DA(D13):DT(C11) DT(D14):DA(C10) DT(D15):DA(C9) DA(D16):DT(C8) DA(D17):DT(C7) DC(D18):DG(C6) DT(D19):DA(C5) DA(D20):DT(C4) DT(D21):DA(C3) DA(D22):DT(C2) DT(D23):DA(C1) chainA ( 50) ASN52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 59) LEU61 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 ( 60) LYS62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 61) PRO63 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 6 1 0 0 0 0 0 0 ( 62) SER64 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 ( 64) THR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 ( 69) ARG71 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 chainB ( 47) ASN52 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) LEU61 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) LYS62 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) PRO63 0 0 0 0 0 4 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) SER64 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) THR66 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG88 1 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pirpsltlalleareaimshfrpalnevglteqqwriirilyqyeelesNqlaelaciLKPSlTgilnRmveqkliqkrkdyddqRislisltesglecfktqavkmeasyqkiqeqygeekmkqllellkdlskikl/psltlalleareaimshfrpalnevglteqqwriirilyqyeelesNqlaelaciLKPSlTgilnRmveqkliqkrkdyddqRislisltesglecfktqavkmeasyqkiqeqygeekmkqllellkdlskikl >7el3_B:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HPAR-DNA COMPLEX FROM ACINETOBACTER BAUMANNII organism=Acinetobacter baumannii DNA sequence DA(C1):DT(D23) DT(C2):DA(D22) DA(C3):DT(D21) DT(C4):DA(D20) DA(C5):DT(D19) DG(C6):DC(D18) DT(C7):DA(D17) DT(C8):DA(D16) DA(C9):DT(D15) DA(C10):DT(D14) DT(C11):DA(D13) DA(C12):DT(D12) DT(C13):DA(D11) DG(C14):DC(D10) DT(C15):DA(D9) DT(C16):DA(D8) DA(C17):DT(D7) DA(C18):DT(D6) DC(C19):DG(D5) DT(C20):DA(D4) DA(C21):DT(D3) DA(C22):DT(D2) DT(C23):DA(D1) chainB ( 47) ASN52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 ( 56) LEU61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 57) LYS62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 58) PRO63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 4 0 0 0 0 0 ( 59) SER64 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 ( 61) THR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 ( 66) ARG71 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 83) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 1 prot.sequence psltlalleareaimshfrpalnevglteqqwriirilyqyeelesNqlaelaciLKPSlTgilnRmveqkliqkrkdyddqRislisltesglecfktqavkmeasyqkiqeqygeekmkqllellkdlskikl >7eqg_BCIQ: title=STRUCTURE OF CSY-ACRIF5 organism=PSEUDOMONAS AERUGINOSA DNA sequence DA(O1):DT(N44) DG(O2):DC(N43) DC(O3):DG(N42) DA(O4):DT(N41) DG(O5):DC(N40) DC(O6):DG(N39) DT(O7):DA(N38) DG(O8):DC(N37) DC(O9):DG(N36) DA(O10):DT(N35) DC(O11):DG(N34) DC(O12):DG(N33) chainC chainI chainQ chainB (101) ASN111 0 0 0 0 0 0 0 0 0 3 4 0 (102) ALA112 0 0 0 0 0 0 0 0 0 0 1 2 (103) ALA113 0 0 0 0 0 0 0 0 0 0 3 0 (237) LYS247 0 0 0 0 0 0 0 0 0 0 0 21 (239) GLN249 0 0 0 0 0 0 0 0 0 0 0 12 (240) ASN250 0 0 0 0 0 0 0 0 0 0 6 11 prot.sequence qelrqfiesfiqerlqgkldklhpdeddkrqtllathrreawladaarrvgqlqlvthtlkpihpdargsnlhslpqapgqpglagshelgdrlvsdvvgNAAaldvfkflslqyqgknllnwltedsaeavqalsdnaeqarewrqafigitavkgapashslakqlyfplpgsgyhllaplfptslvhhvhallrearfgdaakaarearsrqeswphgfseypnlaiqkfggtKpQNisqlnserygenwllpslpphwq/vtdpeallllprlsiqnanaisspltwgfpspgaftgfvhalqrrvgisldieldgvgivchrfeaqisqpagkrtkvfnltrnplnrdgstaaiveegrAHLevslllgvhgdglddhpaqeiarqvqeqagamrlaggsilpwcnerfpapnaellmlggsdeqrrknqrrltrrllpgfalvsreallqqhletlrttlpeattldalldlcrinfepwqvrdkpgwlvpipaGyNAlsplylpgevrnardretplrfvenlfglgewlsphrvaalsdllwyhhaepdkglyrwstprfv/lstasvlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisnrlktkdrdpakldasiqspnlqtvdvanlpsdadtlkvrftlrvlggagtPSAcndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqelildkgdkkgqKsKTlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggvfge/srptvvtvtetprnpgsyevnverdgkmvvgraragsdpgaaaakamqmamewgspnyvilgsnkvlafipeqlrvk >7eqg_DEFGHKPR: title=STRUCTURE OF CSY-ACRIF5 organism=PSEUDOMONAS AERUGINOSA DNA sequence DC(N43) DG(N42) DT(N41) DC(N40) DG(N39) DA(N38) DC(N37) DG(N36) DT(N35) DG(N34) DG(N33) DA(N32) DA(N31) DG(N30) DT(N29) DG(N28) DC(N27) DC(N26) DG(N25) DC(N24) DC(N23) DC(N22) DG(N21) DA(N20) DA(N19) DC(N18) DT(N17) DA(N16) DC(N15) DA(N14) DG(N13) DG(N12) DC(N11) DG(N10) DC(N9) DC(N1) DA(N2) DG(N3) DG(N4) DT(N5) DA(N6) DG(N7) DA(N8):DC(N9) chainD ( 6) VAL11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 (202) LEU233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (304) VAL335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 chainE ( 6) VAL11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 ( 69) PRO74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 70) ASN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 ( 71) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 72) GLN77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 (228) LEU233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 (238) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (330) VAL335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 chainF ( 6) VAL11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 69) PRO74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 70) ASN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 71) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 24 ( 72) GLN77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 (228) LEU233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) VAL335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 7) VAL11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LEU233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) VAL335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 6) VAL11 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ALA13 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) PRO74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) LEU233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) LYS239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) VAL335 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK chainP chainR prot.sequence lstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvlqtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLdkgdkkgqksktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfgeae/lstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisNrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLdkgdkkgqkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge/lstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisNrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLdkgdkkgqksktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge/ilstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvRgtisnrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLdkgdkkgqkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfgea/lstasVlAferkldpsdalmsagawaqrdasqewpavtvreksvrgtisnrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLdkgdkKgqkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge/srptvVtVtetprnpgsyevnverdgkmvvgraragsdpgaaaakamqmamewgspnyvilgsnkvlaFIPEqlrvkm/srptvVtVtetprnpgsyevnverdgkmvvgraragsdpgaaaakamqmamewgspnyvilgsnkvlaFIPEqlrvkm/srptvVtVtetprnpgsyevnverdgkmvvgraragsdpgaaaakamqmamewgspnyvilgsnkvlaFIPEqlrvk >7eqg_G: title=STRUCTURE OF CSY-ACRIF5 organism=? DNA sequence DC(N43) DG(N42) DT(N41) DC(N40) DG(N39) DA(N38) DC(N37) DG(N36) DT(N35) DG(N34) DG(N33) DA(N32) DA(N31) DG(N30) DT(N29) DG(N28) DC(N27) DC(N26) DG(N25) DC(N24) DC(N23) DC(N22) DG(N21) DA(N20) DA(N19) DC(N18) DT(N17) DA(N16) DC(N15) DA(N14) DG(N13) DG(N12) DC(N11) DG(N10) DC(N9) DC(N1) DA(N2) DG(N3) DG(N4) DT(N5) DA(N6) DG(N7) DA(N8):DC(N9) chainG ( 7) VAL11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) PRO74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LEU233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) VAL335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ilstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvRgtisnrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLdkgdkkgqkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfgea >7et4_ADGJ:DNA-binding_domain; title=CRYSTAL STRUCTURE OF ARABIDOPSIS TEM1 AP2 DOMAIN organism=Arabidopsis thaliana DNA sequence DC(B1):DG(C11) DT(B2):DA(C10) DC(B3):DG(C9) DT(B4):DA(C8) DG(B5):DC(C7) DT(B6):DA(C6) DG(B7):DC(C5) DT(B8):DA(C4) DT(B9):DA(C3) DG(B10):DC(C2) DA(B11):DT(C1) DC(B12):DG(H12) DC(I1):DG(H11) DT(I2):DA(H10) DC(I3):DG(H9) DT(I4):DA(H8) DG(I5):DC(H7) DT(I6):DA(H6) DG(I7):DC(H5) DT(I8):DA(H4) DT(I9):DA(H3) DG(I10):DC(H2) DA(I11):DT(H1) DC(F1):DG(E17) DT(F2):DA(E16) DC(F3):DG(E15) DT(F4):DA(E14) DG(F5):DC(E13) DT(F6):DA(E12) DG(F7):DC(E11) DT(F8):DA(E10) DT(F9):DA(E9) DG(F10):DC(E8) DA(F11):DT(E7) DC(F12):DG(K12) DC(L1):DG(K11) DT(L2):DA(K10) DC(L3):DG(K9) DT(L4):DA(K8) DG(L5):DC(K7) DT(L6):DA(K6) DG(L7):DC(K5) DT(L8):DA(K4) DT(L9):DA(K3) DG(L10):DC(K2) DA(L11):DT(K1) chainA ( 14) GLN78 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) PRO79 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLN86 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) TYR88 0 0 0 0 0 0 0 1 12 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) HIS91 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG93 0 0 0 0 0 17 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) TRP95 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 13) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) PRO79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) TYR88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 19 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) HIS91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) TRP95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 13) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) PRO79 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) TYR88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) TRP95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 12) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 ( 13) PRO79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 20) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 22) TYR88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 10 0 0 0 ( 27) ARG93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 12 5 0 0 0 0 0 ( 29) TRP95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 prot.sequence rklpsskykgvvpQPngrwgaQiYekHqRvWlgtfneeeeaassydiavrrfrgrdavtnfksqvdgndaesafldahskaeivdmlrkhtyadefeqsrrk/klpsskykgvvpQPngrwgaQiYekHqRvWlgtfneeeeaassydiavrrfrgrdavtnfksqvdgndaesafldahskaeivdmlrkhtyadefeqsrrkfvn/klpsskykgvvpQPngrwgaQiYekhqRvWlgtfneeeeaassydiavrrfrgrdavtnfksqvdgndaesafldahskaeivdmlrkhtyadefeqsr/lpsskykgvvpQPngrwgaQiYekhqRvWlgtfneeeeaassydiavrrfrgrdavtnfksqvdgndaesafldahskaeivdmlrkhtyadefeqsrrkf >7et4_D:DNA-binding_domain; title=CRYSTAL STRUCTURE OF ARABIDOPSIS TEM1 AP2 DOMAIN organism=Arabidopsis thaliana DNA sequence DC(B1):DG(C11) DT(B2):DA(C10) DC(B3):DG(C9) DT(B4):DA(C8) DG(B5):DC(C7) DT(B6):DA(C6) DG(B7):DC(C5) DT(B8):DA(C4) DT(B9):DA(C3) DG(B10):DC(C2) DA(B11):DT(C1) DC(B12):DG(H12) DC(I1):DG(H11) DT(I2):DA(H10) DC(I3):DG(H9) DT(I4):DA(H8) DG(I5):DC(H7) DT(I6):DA(H6) DG(I7):DC(H5) DT(I8):DA(H4) DT(I9):DA(H3) DG(I10):DC(H2) DA(I11):DT(H1) DC(F1):DG(E17) DT(F2):DA(E16) DC(F3):DG(E15) DT(F4):DA(E14) DG(F5):DC(E13) DT(F6):DA(E12) DG(F7):DC(E11) DT(F8):DA(E10) DT(F9):DA(E9) DG(F10):DC(E8) DA(F11):DT(E7) DC(F12):DG(K12) DC(L1):DG(K11) DT(L2):DA(K10) DC(L3):DG(K9) DT(L4):DA(K8) DG(L5):DC(K7) DT(L6):DA(K6) DG(L7):DC(K5) DT(L8):DA(K4) DT(L9):DA(K3) DG(L10):DC(K2) DA(L11):DT(K1) chainD ( 13) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) PRO79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) TYR88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 19 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) HIS91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) TRP95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klpsskykgvvpQPngrwgaQiYekHqRvWlgtfneeeeaassydiavrrfrgrdavtnfksqvdgndaesafldahskaeivdmlrkhtyadefeqsrrkfvn >7et6_A:DNA-binding_pseudobarrel_domain; title=CRYSTAL STRUCTURE OF ARABIDOPSIS TEM1 B3-DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DC(F2):DG(E15) DA(F3):DT(E14) DA(F4):DT(E13) DA(F5):DT(E12) DC(F6):DG(E11) DA(F7):DT(E10) DG(F8):DC(E9) DG(F9):DC(E8) DT(F10):DA(E7) DG(F11):DC(E6) DG(F12):DC(E5) DT(F13):DA(E4) DT(F14):DA(E3) DT(F15):DA(E2) chainA ( 9) SER202 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 14) LEU207 0 0 0 0 0 0 4 5 1 0 0 0 0 0 ( 15) ASN208 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 16) ARG209 0 0 0 0 0 1 6 0 0 0 0 0 0 0 ( 18) VAL211 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 55) TRP259 0 0 0 0 0 0 1 19 12 0 0 0 0 0 ( 57) SER261 0 0 0 0 0 0 6 5 0 0 0 0 0 0 ( 58) SER262 0 0 0 0 4 5 4 0 0 0 0 0 0 0 ( 60) SER264 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence lfektvtpSdvgkLNRlVipkqhaekhfplpatkgvlinledrtgkvwrfrysyWnSSqSyvltkgwsrfvkeknlragdvvcferstgpdrqlyihwkvrs >7et6_AD:DNA-binding_pseudobarrel_domain; title=CRYSTAL STRUCTURE OF ARABIDOPSIS TEM1 B3-DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DC(F2):DG(E15) DA(F3):DT(E14) DA(F4):DT(E13) DA(F5):DT(E12) DC(F6):DG(E11) DA(F7):DT(E10) DG(F8):DC(E9) DG(F9):DC(E8) DT(F10):DA(E7) DG(F11):DC(E6) DG(F12):DC(E5) DT(F13):DA(E4) DT(F14):DA(E3) DT(F15):DA(E2) chainD chainA ( 9) SER202 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 14) LEU207 0 0 0 0 0 0 4 5 1 0 0 0 0 0 ( 15) ASN208 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 16) ARG209 0 0 0 0 0 1 6 0 0 0 0 0 0 0 ( 18) VAL211 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 55) TRP259 0 0 0 0 0 0 1 19 12 0 0 0 0 0 ( 57) SER261 0 0 0 0 0 0 6 5 0 0 0 0 0 0 ( 58) SER262 0 0 0 0 4 5 4 0 0 0 0 0 0 0 ( 60) SER264 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence lfektvtpSdvgkLNRlVipkqhaekhfplpatkgvlinledrtgkvwrfrysyWnSSqSyvltkgwsrfvkeknlragdvvcferstgpdrqlyihwkvrs/rarevlfeKtvtpSDVgKlnrlvipkqhaekhfplpamtkgvlinledrtgkvwRfRYsYwnssqsyvltkgwsrfvkeknlragdvvcferstgpdrqlyihwkvrss >7eu0_ABE: title=THE CRYO-EM STRUCTURE OF A. THALIANA POL IV-RDR2 BACKTRACKED COMPLEX organism=ARABIDOPSIS THALIANA DNA sequence DT(N31):DA(Q17) DG(N32):DC(Q16) DT(N33):DA(Q15) DG(N34):DC(Q14) DC(N35):DG(Q13) DT(N36):DA(Q12) DT(N37):DA(Q11) DA(N38):DT(Q10) DT(N39):DA(Q9) DC(N40):DG(Q8) DG(N41):DC(Q7) DG(N42):DC(Q6) DT(N43):DA(Q5) DA(N44):DT(Q4) DG(N45):DC(Q3) DA(N46):DT(Q2) DG(N47):DC(Q1) chainA (723) LYS918 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence lqvpvgtltsigfsisnnndrdkmsvleveapnqvtdsrlglpnpdsvcrtcgskdrkvceghfgvinfaysiinpyflkevaallnklgidqrlikkdipmfnslgltsfpvtpngyrrtriykklvgfegntlelssrvmecmqysrlfselcglrfmkdvllgkrsdhtfrtvvvgdpslklneigipesiakrlqvsehifrslmdgdtvlmnrppsihqhsliamtvrilpttsvvslnpicclpfrgdfdgdclhgyvpqsiqakveldelvaldkqlinrqngrnllslgqdsltaaylvnvekncylnraqmqqlqmycpfqlpppaiikaspsstepqwtgmqlfgmlfppgfdytyplnnvvvsngellsfsegsawlrdgegnfierllkhdkgkvldiiysaqemlsqwllmrglsvsladlylssdlqsrknlteeisyglreaeqvcnkqqlmveswrdflavngedkeedsvsdlarfcyerqksatlselavsafkdayrdvqalayrygdqsnsflimskagskgnigklvqhsmciglqnsavslsfgfpreltcaawndpnsplrgakgktttesyvpygviensfltglnplesfvhsvtsrdssfsgnadlpgtlsrrlmffmrdiyaaydgtvrnsfgnqlvqftyetdgpveditgealgslsacalseaaysaldqpislletspllnlknvlecgskKgqreqtmslylseylskkkhgfeygsleiknhleklsfseivstsmiifspvplspwvchfhisekvlkrkqlsaesvvsslneqyksrnrelkldivdldiqntnhcssddqamkddnvcitvtvveaskhsvleldairlvlipflldspvkgdqgikkvnilwtdrpkapkrngelylkvtmygdrgkrncwtalleclpimdmidwgrshpdnirqccsvygidagrsifvanlesavsdtgkeilrehlllvadslsvtgefvalnakgwskqrqvestpapftqacfsspsqcflkaakegvrddlqgsidalawgkvpgfgtgdqfeiii/nlselgegflqsfckkaatsffdkyglishqlnsynyfiehglqnvfqsfgemlvepswryatvkfgevtvekptffsddkeleflpwharlqnmtysarikvnvqvevfdiligsipvmvksilcktsekgkenckkgdcafdqggyfvikgaekvfiaqeqmctkrlwisnspwtvsfrsenkrnrfivrlsenekaedykrrekvltvyflsteipvwllffalgvssdkeamdliafdgddasitnsliasihvadavceafrcgnnaltyveqqikstkfppaesvdeclhlylfpglqslkkkarflgymvkcllnsyagkrkcenrdsfrnkrielagellereirvhlaharrkmtramqkhlsgkpiehyldasvitnglsrafstgawshpfrkmervsgvvanlgranplqtlidlrrtrqqvdaryphpshwgrvcflstpdgencglvknmsllglvstqslesvveklfacgmeelmddtctplfgkhkvllngdwvglcadsesfvaelksrrrqselpremeikrdkddnevriftdagrllrpllvvenlqklkqeqypfdhlldhgileligieeeedcntawgikqllkepkiythceldlsfllgvscavvpfanhdhgrrvlyqsqkhcqqaigfsstnpnircdtlsqqlfypqkplfktlaseclkkevlfngqnaivavnvhlgynqedsivmnkaslErgmfrseqirsykaevdvqfgkthdsleddgfpfiganmstgdivigrchsiklkhtergivqkvvlssndegknfaavslrqvrspclgdkfssmhgqkgvlgyleeqqnfpftiqgivpdivinphafpsrqtpgqlleaalskgiacpiqaytkltrhatpfstpgvteiteqlhragfsrwgnervyngrsgemmrsmifmgptfyqrlvhmsedkvkfrntgpvhpltrqpvadrkrfggikfgemerdcliahgasanlherlftlsdssqmhicrkcktyangpycrvcvssdhvvrvyvpygakllcqelfsmgitlnfdtkl/teeelkrlyriqktlmqmlrdrgyfiadseltmtkqqfirkhgdnmkredlvtlkakrndnsdqlyiffpdeakvgvktmkmytnrmksenvfrailvvqqnltpfartciseisskfhlevfqeaemlvnikehvlvpehqvltteekktllerytvketqlpriqvtdpiaryfglkrgqvvkiirpryvtyryvv >7eu9_A: title=CRYSTAL STRUCTURE OF THE SELENOMETHIONINE(SEMET)-DERIVED CAS12I1 R- LOOP COMPLEX BEFORE TARGET DNA CLEAVAGE organism=LACHNOSPIRACEAE BACTERIUM ND2006 DNA sequence DG(D1):DC(C31) DT(D2):DA(C30) DC(D3):DG(C29) DT(D4):DA(C28) DA(D5):DT(C27) DG(D6):DC(C26) DT(D7):DA(C25) DT(D8):DA(C24) DC(D9):DG(C23) chainA (162) THR168 0 0 0 0 0 0 0 0 14 (164) HIS170 0 0 0 0 0 0 8 4 4 (165) TYR171 0 0 0 0 0 0 0 7 9 (168) SER174 0 0 0 0 0 0 4 2 0 (228) LYS234 0 0 0 3 5 2 0 0 0 (230) ALA236 0 0 0 0 0 0 3 2 0 (292) LEU298 0 0 0 0 0 2 1 0 0 (475) ASN481 0 0 0 0 0 4 10 6 0 (476) SER482 0 0 0 0 0 0 3 7 2 prot.sequence nasetrkayttkmiprshdrmkllgnfmdylmdgtpiffelwnqfgggidrdiisgtankdkisddlllavnwfkvmpinskpqgvspsnlanlfqqysgsepdiqaqeyfasnfdtekhqwkdmrveyerllaelqlsrsdmhhdlklmykekciglslsTaHYitSvmfgtgaknnrqtkhqfyskviqlleestqinsveqlasiilkagdcdsyrklrircsrKgAtpsilkivqdyelgtnhddevnvpslianlkeklgrfeyecewkcmekikaflaskvgpyyLgsysamlenalspikgmttknckfvlkqidakndikyenepfgkivegffdspyfesdtnvkwvlhphhigesniktlwedlnaihskyeediaslsedkkekrikvyqgdvcqtintyceevgkeaktplvqllrylysrkddiavdkiidgitflskkhkvekqkinpviqkypsfnfgnNSkllgkiispkdklkhnlkcnrnqvdnyiwieikvlntktmrwekhhyalsstrfleevyypatsenppdalaarfrtktngyegkpalsaeqieqirsapvglrkvkkrqmrleaarqqnllprytwgkdfninickrgnnfevtlatkvkkkkeknykvvlgyaanivrkntyaaieahangdgvidyndlpvkpiesgfvtvesqvrdksydqlsyngvkllyckphvesrrsflekyrngtmkdnrgnniqidfmkdfeaiaddetslyyfnmkyckllqssirnhssqakeyreeifellrdgklsvlklsslsnlsfvmfkvaksligtyfghllkkpkappitdedkqkadpemfalrlaleekrlnkvkskkeviankivakalelrdkygpvlikgenisdttkkgkksstnsflmdwlargvankvkemvmmhqglefvevnpnftshqdpfvhknpentfrarysrctpselteknrkeilsflsdkpskrptnayynegamaflatyglkkndvlgvslekfkqimanilhqrsedqllfpsrggmfylatykldadatsvnwngkqfwvcnadlvaaynvglvdiqkdfk >7eyi_G:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF ZBTB7A IN COMPLEX WITH GAMMA-GLOBIN -200 SEQUENCE ELEMENT WITH C-194A MUTATION organism=Homo sapiens DNA sequence DG(B1):DC(A-192) DT(B2):DA(A-193) DT(B3):DA(A-194) DG(B4):DC(A-195) DG(B5):DC(A-196) DG(B6):DC(A-197) DA(B7):DT(A-198) DA(B8):DT(A-199) DG(B9):DC(A-200) DG(B10):DC(A-201) DG(B11):DC(A-202) DG(B12):DC(A-203) DC(B13):DG(A-204) DC(B14):DG(A-205) DC(B15):DG(A-206) DT(B16):DA(A-207) chainG ( 15) ALA394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 17) LYS396 0 0 0 0 0 0 0 0 0 0 2 7 4 0 0 0 ( 20) ARG399 0 0 0 0 0 0 0 0 0 7 11 1 0 0 0 0 ( 42) ARG421 0 0 0 0 0 0 0 0 8 11 2 0 0 0 0 0 ( 44) ASP423 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 ( 45) LYS424 0 0 0 0 0 0 0 2 9 2 0 0 0 0 0 0 ( 72) TYR451 0 0 0 0 0 0 0 1 13 3 0 0 0 0 0 0 ( 98) ARG477 0 0 0 19 14 3 0 0 0 0 0 0 0 0 0 0 ( 99) SER478 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (100) ASP479 0 0 0 0 2 7 8 0 0 0 0 0 0 0 0 0 (101) HIS480 0 0 12 11 0 0 0 0 0 0 0 0 0 0 0 0 (104) ARG483 0 1 9 7 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmqkcpicekviqgAgKlpRhirthtgekpyecnickvrftRqDKlkvhmrkhtgekpylcqqcgaafahnYdlknhmrvhtglrpyqcdsccktfvRSDHlhRhlkkdgc >7ezj_A:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF P73 DNA BINDING DOMAIN COMPLEX BOUND WITH 1 BP AND 2 BP SPACER DNA RESPONSE ELEMENTS. organism=Homo sapiens DNA sequence DC(E398):DG(F421) DA(E399):DT(F420) DG(E400):DC(F419) DG(E401):DC(F418) DC(E402):DG(F417) DA(E403):DT(F416) DT(E404):DA(F415) DG(E405):DC(F414) DC(E406):DG(F413) DC(E407):DG(F412) DT(E408):DA(F411) chainA ( 28) LYS138 0 4 8 8 0 0 0 0 0 0 0 ( 29) SER139 0 1 0 0 0 0 0 0 0 0 0 (186) ALA296 0 0 0 0 1 0 0 0 0 0 0 (187) CYS297 0 0 0 3 0 0 0 0 0 0 0 (190) ARG300 0 0 0 5 10 10 0 0 0 0 0 prot.sequence hhefipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq >7ezj_CD:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF P73 DNA BINDING DOMAIN COMPLEX BOUND WITH 1 BP AND 2 BP SPACER DNA RESPONSE ELEMENTS. organism=Homo sapiens DNA sequence DC(G500):DG(H523) DA(G501):DT(H522) DG(G502):DC(H521) DG(G503):DC(H520) DC(G504):DG(H519) DA(G505):DT(H518) DT(G506):DA(H517) DG(G507):DC(H516) DC(G508):DG(H515) DC(G509):DG(H514) DT(G510):DA(H513) DG(G511):DC(H512) chainC ( 27) LYS138 0 0 0 0 0 0 0 0 5 8 3 0 (185) ALA296 0 0 0 0 0 0 0 1 0 0 0 0 (186) CYS297 0 0 0 0 0 0 0 0 2 0 0 0 (189) ARG300 0 0 0 0 0 0 10 9 4 0 0 0 chainD ( 26) LYS138 0 3 8 7 0 0 0 0 0 0 0 0 (184) ALA296 0 0 0 1 1 0 0 0 0 0 0 0 (185) CYS297 0 0 0 4 0 0 0 0 0 0 0 0 (188) ARG300 0 0 0 4 10 10 0 0 0 0 0 0 prot.sequence hefipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq/efipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyre >7ezj_IJ:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF P73 DNA BINDING DOMAIN COMPLEX BOUND WITH 1 BP AND 2 BP SPACER DNA RESPONSE ELEMENTS. organism=Homo sapiens DNA sequence DC(N398):DG(M421) DA(N399):DT(M420) DG(N400):DC(M419) DG(N401):DC(M418) DC(N402):DG(M417) DA(N403):DT(M416) DT(N404):DA(M415) DG(N405):DC(M414) DC(N406):DG(M413) DC(N407):DG(M412) DT(N408):DA(M411) DG(N409):DC(M410) chainI ( 26) LYS138 0 0 0 0 0 0 0 0 7 11 3 0 ( 27) SER139 0 0 0 0 0 0 0 0 0 0 1 2 (184) ALA296 0 0 0 0 0 0 0 1 1 0 0 0 (185) CYS297 0 0 0 0 0 0 0 0 3 0 0 0 (188) ARG300 0 0 0 0 0 0 14 10 2 0 0 0 chainJ ( 25) LYS138 0 3 8 7 0 0 0 0 0 0 0 0 (183) ALA296 0 0 0 1 1 0 0 0 0 0 0 0 (184) CYS297 0 0 0 3 0 0 0 0 0 0 0 0 (187) ARG300 0 0 0 4 13 13 0 0 0 0 0 0 prot.sequence efipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyre/fipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyr >7ezj_cd:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF P73 DNA BINDING DOMAIN COMPLEX BOUND WITH 1 BP AND 2 BP SPACER DNA RESPONSE ELEMENTS. organism=Homo sapiens DNA sequence DC(h512):DG(g511) DA(h513):DT(g510) DG(h514):DC(g509) DG(h515):DC(g508) DC(h516):DG(g507) DA(h517):DT(g506) DT(h518):DA(g505) DG(h519):DC(g504) DC(h520):DG(g503) DC(h521):DG(g502) DT(h522):DA(g501) DG(h523):DC(g500) chainc ( 28) LYS138 0 1 5 5 0 0 0 0 0 0 0 0 (186) ALA296 0 0 0 1 1 0 0 0 0 0 0 0 (187) CYS297 0 0 0 2 0 0 0 0 0 0 0 0 (190) ARG300 0 0 0 6 10 8 0 0 0 0 0 0 chaind ( 26) LYS138 0 0 0 0 0 0 0 0 7 7 4 0 (184) ALA296 0 0 0 0 0 0 0 1 1 0 0 0 (185) CYS297 0 0 0 0 0 0 0 0 3 0 0 0 (188) ARG300 0 0 0 0 0 0 9 10 6 0 0 0 prot.sequence hhefipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyr/efipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyr >7ezj_ij:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF P73 DNA BINDING DOMAIN COMPLEX BOUND WITH 1 BP AND 2 BP SPACER DNA RESPONSE ELEMENTS. organism=Homo sapiens DNA sequence DC(n398):DG(m421) DA(n399):DT(m420) DG(n400):DC(m419) DG(n401):DC(m418) DC(n402):DG(m417) DA(n403):DT(m416) DT(n404):DA(m415) DG(n405):DC(m414) DC(n406):DG(m413) DC(n407):DG(m412) DT(n408):DA(m411) DG(n409):DC(m410) chaini ( 27) LYS138 0 0 0 0 0 0 0 0 4 9 13 0 ( 28) SER139 0 0 0 0 0 0 0 0 0 0 7 2 (185) ALA296 0 0 0 0 0 0 0 1 1 0 0 0 (186) CYS297 0 0 0 0 0 0 0 0 3 0 0 0 (189) ARG300 0 0 0 0 0 0 12 10 4 0 0 0 chainj ( 23) LYS138 0 3 8 6 0 0 0 0 0 0 0 0 (181) ALA296 0 0 0 1 0 0 0 0 0 0 0 0 (182) CYS297 0 0 0 3 0 0 0 0 0 0 0 0 (185) ARG300 0 0 0 3 10 15 0 0 0 0 0 0 prot.sequence hefipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq/psntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyre >7f0r_CDF: title=CRYO-EM STRUCTURE OF PSEUDOMONAS AERUGINOSA SUTA TRANSCRIPTION ACTIVATION COMPLEX organism=? DNA sequence DT(I9):DA(H77) DC(I10):DG(H76) DG(I11):DC(H75) DT(I12):DA(H74) DC(I13):DG(H73) DT(I14):DA(H72) DC(I15):DG(H71) DA(I16):DT(H70) DA(I17):DT(H69) DC(I18):DG(H68) DC(I19):DG(H67) DG(I20):DC(H66) DA(I21):DT(H65) DG(I22):DC(H64) DA(I37):DT(H49) DC(I38):DG(H48) DA(I39):DT(H47) DG(I40):DC(H46) DC(I41):DG(H45) DA(I42):DT(H44) DT(I43):DA(H43) DC(I44):DG(H42) DG(I45):DC(H41) DT(I46):DA(H40) DG(I47):DC(H39) DT(I48):DA(H38) DG(I49):DC(H37) DG(I50):DC(H36) DT(I51):DA(H35) DT(I52):DA(H34) DC(I53):DG(H33) DC(I54):DG(H32) DG(I55):DC(H31) DT(I56):DA(H30) DC(I57):DG(H29) DA(I58):DT(H28) DA(I59):DT(H27) DG(I60):DC(H26) chainC (544) GLU546 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (545) ARG547 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (195) SER210 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) GLU211 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) THR212 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 94) TYR150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) TRP153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) TRP154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) GLN157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) GLU160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) ILE174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) HIS175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) LYS178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) GLU305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 4 0 0 (252) ARG308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 prot.sequence ysytekkrirkdfsklpdvmdvpyllaiqldsyreflqagatkeqfrdvglhaafksvfpiisysgnaaleyvgyrlgepafdvkecvlrgvtfavplrvkvrliifdressnkaikdikeqevymgeiplmtengtfiingtervivsqlhrspgvffdhdrgkthssgkllysariipyrgswldfefdpkdcvfvridrrrklpasvllralgysteeilnafyatnvfhikgetlnlelvpqrlrgevasidikdgsgkviveqgrritarhinqlekagvsqlevpfdyligrtiakaivhpatgeiiaecnteltldllakvakaqvvrietlytndidcgpfisdtlkidntsnqlealveiyrmmrpgepptkeaaetlfgnlffsaerydlsavgrmkfnrrigrteiegpgvlskediidvlktlvdirngkgivddidhlgnrrvrcvgemaenqfrvglvrveravkerlsmaeseglmpqdlinakpvaaaikeffgssqlsqfmdqnnplseithkrrvsalgpggltrERagfevrdvhpthygrvcpietpegpniglinslatyartnkygflespyrvvkdslvtdeivflsaieeadhviaqasatlnekgqlvdelvavrhlneftvkapedvtlmdvspkqvvsvaaslipflehddanralmgsnmqrqavptlradkplvgtgmernvardsgvcvvarrggvidsvdasrvvvrvaddevetgeagvdiynltkytrsnqntcinqrplvskgdvvargdiladgpstdmgelalgqnmrvafmpwngfnfedsiclservvqedrfttihiqeltcvardtklgpeeitadipnvgeaalnkldeagivyvgaevqagdilvgkvtpkgetqltpeekllraifgekasdvkdtslrvptgtkgtvidvqvftrdgverdsralsiekmqldqirkdlneefrivegatferlraalvgakaaddalneqlekaqayisdrrqllddkfedkkrklqqgddlapgvlkivkvylaikrriqpgdkmagrhgnkgvvsvimpvedmphdangtpvdivlnplgvpsrmnvgqilethlglaakglgekinrmleeqrkvaelrkflheiyneiggreenldelgdneilalaknlrggvpmatpvfdgakereikamlkladlpesgqmrlfdgrtgnqferpttvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgdhrmeagmpesfnvlikeirslgidielet/efdairiglaspemirswsfgevkkpetinyrtfkperdglfcakifgpvkdyeclcgkykrlkhrgvicekcgvevalakvrrermghielaspvahiwflkslpsrigllldmtlrdiervlyfesyvvidpgmttlekgqllndeqyfealeefgddfdarmgaeavhellnaidleheigrlreeipqtnSETkikklskrlklmeafqgsgnkpewmvltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgptlrlhqcglpkkmalelfkpfifgklegrgmattikaakkmverelpevwdvlaevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvmglyymtreainakgegmafadlqevdrayrsgqaslharvkvrinekikgedgqltantrivdttvgrallfqvvpaglpfdvvnqsmkkkaisklinhcyrvvglkdtvifadqlmytgfaystisgvsigvndfvipdekariinaatdevkeiesqyasglvtqgekynkvidlwskandevskammanlskekvvdregkevdqesfnsmymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteidcgtehgllmsphieggdvveplgervlgrviardvfkpgsdevivpagtlidekwvdflevmsvdevvvrspitcetrhgicamcygrdlarghrvnigeavgviaaqsigepgtqltaadnvqvknggtirlhnlkhvvradgalvavsrsgelavaddfgrereryklpygavisvkegdkvdpgaivakwdphthpivtevdgtvafvgmeegitvkrqtdeltgltnievmdpkdrpaagkdirpavklidaagkdlllpgtdvpaqyflpanalvnltdgakvsigdvvaripqtgglprvadlfearrpkepsilaeisgtisfgketkgkrrlvitpndgsdpyeelipkwrhlnvfegeqvnrgevisdgpsnphdilrllgvsslakyivneiqdvyrlqgvkindkhietilrqmlrkvevsesgdssfikgdqveltqvleeneqlgtedkfpakyervllgitkaslstesfisaasfqettrvlteaavtgkrdflrglkenvvvgrlipagtglayhserkrqrdlg/traldatqlylneigfsplltpeeevhfarlaqkgdpagrkrmiesnlrlvvkiarryvnrglslldlieegnlgliravekfdpergfrfstYatWWiRQtiEraimnqtrtirlpIHvvKelnvylraarelthkldhepspeeianllekpvaevkrmlglnervtsvdvslgpdsdktlldtltddrptdpcellqdddlsesidqwlteltdkqrevvirrfglrghesstleevgqeigltrErvRqiqvealkrlreileknglssdalfq >7f0r_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF PSEUDOMONAS AERUGINOSA SUTA TRANSCRIPTION ACTIVATION COMPLEX organism=? DNA sequence DT(I9):DA(H77) DC(I10):DG(H76) DG(I11):DC(H75) DT(I12):DA(H74) DC(I13):DG(H73) DT(I14):DA(H72) DC(I15):DG(H71) DA(I16):DT(H70) DA(I17):DT(H69) DC(I18):DG(H68) DC(I19):DG(H67) DG(I20):DC(H66) DA(I21):DT(H65) DG(I22):DC(H64) DA(I37):DT(H49) DC(I38):DG(H48) DA(I39):DT(H47) DG(I40):DC(H46) DC(I41):DG(H45) DA(I42):DT(H44) DT(I43):DA(H43) DC(I44):DG(H42) DG(I45):DC(H41) DT(I46):DA(H40) DG(I47):DC(H39) DT(I48):DA(H38) DG(I49):DC(H37) DG(I50):DC(H36) DT(I51):DA(H35) DT(I52):DA(H34) DC(I53):DG(H33) DC(I54):DG(H32) DG(I55):DC(H31) DT(I56):DA(H30) DC(I57):DG(H29) DA(I58):DT(H28) DA(I59):DT(H27) DG(I60):DC(H26) chainF ( 94) TYR150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) TRP153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) TRP154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) GLN157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) GLU160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) ILE174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) HIS175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) LYS178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) GLU305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 4 0 0 (252) ARG308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 prot.sequence traldatqlylneigfsplltpeeevhfarlaqkgdpagrkrmiesnlrlvvkiarryvnrglslldlieegnlgliravekfdpergfrfstYatWWiRQtiEraimnqtrtirlpIHvvKelnvylraarelthkldhepspeeianllekpvaevkrmlglnervtsvdvslgpdsdktlldtltddrptdpcellqdddlsesidqwlteltdkqrevvirrfglrghesstleevgqeigltrErvRqiqvealkrlreileknglssdalfq >7f2f_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=THE COMPLEX OF DNA WITH THE C-TERMINAL DOMAIN OF TYE7 FROM SACCHAROMYCES CEREVISIAE. organism=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) DNA sequence DA(E2):DT(H15) DG(E3):DC(H14) DA(E4):DT(H13) DT(E5):DA(H12) DC(E6):DG(H11) DA(E7):DT(H10) DT(E8):DA(H9) DG(E9):DC(H8) DT(E10):DA(H7) DG(E11):DC(H6) DT(E12):DA(H5) DG(E13):DC(H4) DC(E14):DG(H3) DC(E15):DG(H2) chainA ( 9) HIS185 0 0 0 0 0 0 0 0 10 11 3 0 0 0 ( 10) ASN186 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 13) GLU189 0 0 0 0 0 0 0 0 8 9 5 0 0 0 ( 16) TYR192 0 0 0 0 0 0 0 0 0 7 0 0 0 0 ( 17) ARG193 0 0 0 0 0 0 11 2 0 0 0 0 0 0 chainB ( 9) HIS185 0 0 0 5 7 9 0 0 0 0 0 0 0 0 ( 10) ASN186 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 12) ILE188 0 1 2 1 0 0 0 0 0 0 0 0 0 0 ( 13) GLU189 0 0 0 5 11 10 0 0 0 0 0 0 0 0 ( 16) TYR192 0 0 0 1 6 0 0 0 0 0 0 0 0 0 ( 17) ARG193 0 0 0 0 0 0 0 7 0 0 0 0 0 0 prot.sequence ltpfqkqaHNkiEkrYRinintkiarlqqiipwvaseqtafevgdstklnksmilekavdyilylqnnerlyemevqrlkseidtlkqdq/ltpfqkqaHNkIEkrYRinintkiarlqqiipwvaseqtafevgstklnksmilekavdyilylqnnerlyemevqrlkseidtlkqdqklehh >7f2f_B:HLH,_helix-loop-helix_DNA-binding_domain; title=THE COMPLEX OF DNA WITH THE C-TERMINAL DOMAIN OF TYE7 FROM SACCHAROMYCES CEREVISIAE. organism=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) DNA sequence DA(E2):DT(H15) DG(E3):DC(H14) DA(E4):DT(H13) DT(E5):DA(H12) DC(E6):DG(H11) DA(E7):DT(H10) DT(E8):DA(H9) DG(E9):DC(H8) DT(E10):DA(H7) DG(E11):DC(H6) DT(E12):DA(H5) DG(E13):DC(H4) DC(E14):DG(H3) DC(E15):DG(H2) chainB ( 9) HIS185 0 0 0 5 7 9 0 0 0 0 0 0 0 0 ( 10) ASN186 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 12) ILE188 0 1 2 1 0 0 0 0 0 0 0 0 0 0 ( 13) GLU189 0 0 0 5 11 10 0 0 0 0 0 0 0 0 ( 16) TYR192 0 0 0 1 6 0 0 0 0 0 0 0 0 0 ( 17) ARG193 0 0 0 0 0 0 0 7 0 0 0 0 0 0 prot.sequence ltpfqkqaHNkIEkrYRinintkiarlqqiipwvaseqtafevgstklnksmilekavdyilylqnnerlyemevqrlkseidtlkqdqklehh >7f4y_B:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF REPLISOMAL DIMER OF DNA POLYMERASE FROM BACTERIOPHAGE RB69 WITH DNA DUPLEXES organism=Enterobacteria phage RB69 DNA sequence DG(S5):DC(Q115) DT(S6):DA(Q114) DA(S7):DT(Q113) DA(S8):DT(Q112) DG(S9):DC(Q111) DC(S10):DG(Q110) DA(S11):DT(Q109) DG(S12):DC(Q108) DT(S13):DA(Q107) DC(S14):DG(Q106) DC(S15):DG(Q105) DG(S16):DC(Q104) DC(S17):DG(Q103) DT(S18):DA(Q102) DC(S19):DG(Q101) chainB (567) TYR567 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS706 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 (734) LYS734 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (800) LYS800 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 prot.sequence mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslYgalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdTdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekkaslfdmf >7f75_CDFG: title=CRYO-EM STRUCTURE OF SPX-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX organism=BACILLUS SUBTILIS DNA sequence DA(J3):DT(K59) DG(J4):DC(K58) DC(J5):DG(K57) DA(J6):DT(K56) DT(J7):DA(K55) DT(J8):DA(K54) DA(J9):DT(K52) DA(J11):DT(K51) DA(J12):DT(K50) DT(J13):DA(K49) DA(J14):DT(K48) DG(J15):DC(K47) DC(J16):DG(K46) DG(J17):DC(K45) DT(J18):DA(K44) DG(J19):DC(K43) DA(J20):DT(K42) DA(J21):DT(K41) DC(J22):DG(K40) DA(J24):DT(K38) DA(J25):DT(K37) DT(J26):DA(K36) DG(J27):DC(K35) DG(J28):DC(K34) DG(J29):DC(K33) DA(J30):DT(K32) DG(J31):DC(K31) DA(J32):DT(K30) DT(J33):DA(K29) DG(J34):DC(K28) DC(J35):DG(K27) DT(J36):DA(K26) DT(J37):DA(K25) DA(J38):DA(K24) DT(J39):DT(K23) DA(J40):DA(K22) DA(J41):DA(K21) DT(J42):DT(K20) DG(J43):DG(K19) DG(J44):DG(K18) DG(J45):DG(K17) DA(J46):DA(K16) DG(J47):DG(K15) DC(J48):DC(K14) DT(J49):DT(K13) DG(J50):DG(K12) DT(J51):DA(K11) DC(J52):DG(K10) DA(J53):DT(K9) DC(J54):DG(K8) DG(J55):DC(K7) DG(J56):DC(K6) DA(J57):DT(K5) DT(J58):DA(K4) DG(J59):DC(K3) DC(J60):DG(K2) DA(J61):DT(K1) chainC (164) TRP169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (166) GLU171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (181) ARG186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (236) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) GLU244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (406) ARG426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) LYS459 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) GLU460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (478) ARG498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainD (247) ARG248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) ARG303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 (414) ALA415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (415) PRO416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 (773) THR794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 (774) ALA795 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 chainF ( 3) VAL102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LEU106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) VAL154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) THR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) TYR189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) THR191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) TRP192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) GLN196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) THR199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ILE202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) HIS214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) GLU217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ILE270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) LEU278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) PHE281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) THR342 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) GLU344 0 0 0 0 0 0 0 0 0 0 0 1 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ARG345 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) GLN348 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 9) SER9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) THR11 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) SER12 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) LYS62 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG92 0 5 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vqygrhrqrrsyarisevlelpnlieiqtssyqwfldeglremfqdispiedftgnlslefidyslgepkypveeskerdvtysaplrvkvrlinketgevkdqdvfmgdfpimtdtgtfiingaervivsqlvrspsvyfsgkvdkngkkgftatvipnrgaWlEyetdakdvvyvridRtrklpvtvllralgfgsdqeildligeneylrntldkdntensdkalleiyerlRpgEpptvenakslldsrffdpkrydlanvgrykinkklhiknrlfnqrlaetlvdrrtldkvlpylengigfrklypnggvvedevtlqsikifaptdqegeqvinvignayieeeiknitpadiissisyffnllhgvgdtddidhlgnrrlrsvgellqnqfriglsRmervvrermsiqdtntitpqqlinirpviasiKEffgssqlsqfmdqtnplaelthkrrlsalgpggltreRagmevrdvhyshygrmcpietpegpniglinslssyakvnrfgfietpyrrvdpetgkvtgridyltadeednyvvaqanarlddegafiddsivarfrgentvvsrnrvdymdvspkqvvsaatacipflenddsnralmganmqrqavplmqpeapfvgtgmeyvsgkdsgaavickhgiverveaknvwvrryeevdgqkvkgnldkysllkfvrsnqgtcynqrpivsvgdevvkgeiladgpsmelgelalgrnvmvgfmtwdgynyedaiimserlvkddvytsihieeyeseardtklgpeeitrdipnvgedalrnlddrgiirigaevkdgdllvgkvtpkgvteltaeerllhaifgekarevrdtslrvphggggiihdvkvfnredgdelppgvnqlvrvyivqkrkisegdkmagrhgnkgviskilpeedmpylpdgtpidimlnplgvpsrmnigqvlelhmgmaarylgihiaspvfdgareedvwetleeagmsrdaktvlydgrtgepfdnrvsvgimymiklahmvddklharstgpyslvtqqplggkaqfggqrfgemevwaleaygaaytlqeiltvksddvvgrvktyeaivkgdnvpepgvpesfkvlikelqslgmdvkilsgdeeeiem/ldvnnfeymniglaspdkirswsfgevkkpetinyrtlkpekdglfcerifgptkdwechcgkykrvrykgvvcdrcgvevtrakvrrermghielaapvshiwyfkgipsrmglvldmspraleeviyfasyvvtdpantplekkqllsekeyrayldkygnkfqasmgaeaihkllqdidlvkevdmlkeelktsqgqrrtraikrlevleafrnsgnkpswmildvlpvippelrpmvqldggRfatsdlndlyrrvinrnnrlkrlldlgapsiivqnekrmlqeavdalidngrrgRpvtgpgnrplkslshmlkgkqgrfrqnllgkrvdysgrsvivvgphlkmyqcglpkemalelfkpfvmkelvekglahniksakrkiervqpevwdvlesvikehpvllnrAPtlhrlgiqafeptlvegrairlhplvctaynadfdgdqmavhvplsaeaqaearilmlaaqnilnpkdgkpvvtpsqdmvlgnyyltleragavgegmvfkntdeallayqngyvhlhtrvavaanslqrskllittvgklvfneilpesfpymneptksnieedvkaviaqqpinapfkkgilgkiiaeifkrfhitetskmldrmknlgfkystkagitvgvsdivvlddkqeileeaqskvdnvmkqfrrgliteeeryervisiwsaakdviqgklmksldelnpiymmsdsgargnasnftqlagmrglmanpagriielpikssfregltvleyfisthgarkgladtalkTAdsgyltrrlvdvaqdviiretdcgtdrgilakplkegtetierleerligrfarkqvkhpetgevlvnenelidedkaleiveagieevwirsaftcntphgvckrcygrnlatgsdvevgeavgiiaaqsigepgtqltglpriqelfearnpatiteidgtvveinevrdkqqeivvqgavetrsytapynsrlkvaegdkitrgqvltegsidpkellkvtdlttvqeyllhevqkvyrmqgveigdkhvevmvrqmlrkvrvgdtdvlpgtlldihqfteankkvllegnrpatgrpvllgitkasletdsflsaasfqettrvltdaaikgkrdellglkenviigklvpagtgmmkyrkvkp/dpVRmyLkeigrvnllsakeEiayaqkieegdeeskrrlaeAnlRlvvsiakryVgRgmlfldliqegnmglmkavekfdyRkgykfSTYaTWwiRQaiTRaIadqartiripvHmvEtinklirvqrqllqdlgreptpeeiaedmdltpekvreilkiaqepvsletpIgeeddshLgdFiedqeatspsdhaayellkeqledvldtltdreenvlrlrfglddgrtrtleevgkvfgvTrERirQieakalrklrhpsrskrlkdfle/mvtlytspScTScrkarawleehdipfvernifseplsideikqilrmtedgtdeiistrsKvfqklnvnvesmplqdlyrlinehpgllrRpiiidekrlqvgynedeirrflprkvrpfqlreaqrl >7f75_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF SPX-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX organism=BACILLUS SUBTILIS DNA sequence DT(K1):DA(J61) DG(K2):DC(J60) DC(K3):DG(J59) DA(K4):DT(J58) DT(K5):DA(J57) DC(K6):DG(J56) DC(K7):DG(J55) DG(K8):DC(J54) DT(K9):DA(J53) DG(K10):DC(J52) DA(K11):DT(J51) DG(K12):DG(J50) DT(K13):DT(J49) DC(K14):DC(J48) DG(K15):DG(J47) DA(K16):DA(J46) DG(K17):DG(J45) DG(K18):DG(J44) DG(K19):DG(J43) DT(K20):DT(J42) DA(K21):DA(J41) DA(K22):DA(J40) DT(K23):DT(J39) DA(K24):DA(J38) DA(K25):DT(J37) DA(K26):DT(J36) DG(K27):DC(J35) DC(K28):DG(J34) DA(K29):DT(J33) DT(K30):DA(J32) DC(K31):DG(J31) DT(K32):DA(J30) DC(K33):DG(J29) DC(K34):DG(J28) DC(K35):DG(J27) DA(K36):DT(J26) DT(K37):DA(J25) DT(K38):DA(J24) DG(K40):DC(J22) DT(K41):DA(J21) DT(K42):DA(J20) DC(K43):DG(J19) DA(K44):DT(J18) DC(K45):DG(J17) DG(K46):DC(J16) DC(K47):DG(J15) DT(K48):DA(J14) DA(K49):DT(J13) DT(K50):DA(J12) DT(K51):DA(J11) DT(K52):DA(J9) DA(K54):DT(J8) DA(K55):DT(J7) DT(K56):DA(J6) DG(K57):DC(J5) DC(K58):DG(J4) DT(K59):DA(J3) chainF ( 3) VAL102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LEU106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) GLU120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) VAL154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) SER187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) THR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) TYR189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) THR191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) TRP192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) GLN196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) THR199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ILE202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) HIS214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) GLU217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ILE270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) LEU278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) PHE281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) THR342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (245) GLU344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 1 0 0 0 0 0 0 0 0 0 0 0 (246) ARG345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 (249) GLN348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence dpVRmyLkeigrvnllsakeEiayaqkieegdeeskrrlaeAnlRlvvsiakryVgRgmlfldliqegnmglmkavekfdyRkgykfSTYaTWwiRQaiTRaIadqartiripvHmvEtinklirvqrqllqdlgreptpeeiaedmdltpekvreilkiaqepvsletpIgeeddshLgdFiedqeatspsdhaayellkeqledvldtltdreenvlrlrfglddgrtrtleevgkvfgvTrERirQieakalrklrhpsrskrlkdfle >7f9h_AB:lambda_repressor-like_DNA-binding_domains; title=COMPLEX STRUCTURE OF ENRR-DNA organism=Edwardsiella piscicida DNA sequence DC(D1):DG(C22) DG(D2):DC(C21) DA(D3):DT(C20) DA(D4):DT(C19) DA(D5):DT(C18) DT(D6):DA(C17) DA(D7):DT(C16) DT(D8):DA(C15) CBR(D9):DG(C14) DT(D10):DA(C13) DA(D11):DT(C12) DT(D12):DA(C11) DA(D13):DT(C10) DG(D14):CBR(C9) DA(D15):DT(C8) DT(D16):DA(C7) DA(D17):DT(C6) DT(D18):DA(C5) DT(D19):DA(C4) DT(D20):DA(C3) DC(D21):DG(C2) DG(D22):DC(C1) chainA ( 15) ARG21 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG47 0 0 0 0 0 0 0 4 14 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ASN51 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 48) GLU54 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG55 0 0 0 0 0 0 0 0 0 0 1 8 11 1 0 0 0 0 0 0 0 0 ( 51) TYR57 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 chainB ( 7) ARG21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 33) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 18 14 5 0 0 0 0 0 0 0 ( 37) ASN51 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 40) GLU54 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 ( 41) ARG55 0 0 0 0 0 0 0 0 2 11 8 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR57 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sqkkrskgsaqdwhRadivaalhkrgitlaglsrahglaaRtlsNamERhYpraerliaqaldmrpediwpqryrn/saqdwhRadivaalhkrgitlaglsrahglaaRtlsNamERhYpraerliaqaldmrpediwpqryrn >7f9h_B:lambda_repressor-like_DNA-binding_domains; title=COMPLEX STRUCTURE OF ENRR-DNA organism=Edwardsiella piscicida DNA sequence DC(C1):DG(D22) DG(C2):DC(D21) DA(C3):DT(D20) DA(C4):DT(D19) DA(C5):DT(D18) DT(C6):DA(D17) DA(C7):DT(D16) DT(C8):DA(D15) CBR(C9):DG(D14) DT(C10):DA(D13) DA(C11):DT(D12) DT(C12):DA(D11) DA(C13):DT(D10) DG(C14):CBR(D9) DA(C15):DT(D8) DT(C16):DA(D7) DA(C17):DT(D6) DT(C18):DA(D5) DT(C19):DA(D4) DT(C20):DA(D3) DC(C21):DG(D2) DG(C22):DC(D1) chainB ( 7) ARG21 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG47 0 0 0 0 0 0 0 5 14 18 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ASN51 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 40) GLU54 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG55 0 0 0 0 0 0 0 0 0 0 0 8 11 2 0 0 0 0 0 0 0 0 ( 43) TYR57 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 prot.sequence saqdwhRadivaalhkrgitlaglsrahglaaRtlsNamERhYpraerliaqaldmrpediwpqryrn >7fef_A:DNA-binding_domain; title=CRYSTAL STRUCTURE OF ATMBD6 WITH DNA organism=ARABIDOPSIS THALIANA DNA sequence DG(F1):DC(E12) DC(F2):DG(E11) DC(F3):DG(E10) DA(F4):DT(E9) DA(F5):DT(E8) 5CM(F6):DG(E7) DG(F7):5CM(E6) DT(F8):DA(E5) DT(F9):DA(E4) DG(F10):DC(E3) DG(F11):DC(E2) DC(F12):DG(E1) chainA ( 14) ARG92 0 0 0 0 1 12 18 0 0 0 0 0 ( 19) THR97 0 0 0 0 1 0 0 0 0 0 0 0 ( 24) ASP102 0 0 0 0 0 1 3 0 0 0 0 0 ( 26) TYR104 0 0 0 0 0 0 1 0 0 0 0 0 ( 37) ARG115 0 0 0 0 0 15 14 4 0 0 0 0 prot.sequence nwlppgwrvedkiRtsgaTagsvdkyyyepntgrkfRsrtevlyyleh >7fhj_A:DNA-binding_domain; title=CRYSTAL STRUCTURE OF BAZ2A WITH DNA organism=Homo sapiens DNA sequence DC(C1):DG(D12) DG(C2):DC(D11) DG(C3):DC(D10) DA(C4):DT(D9) DA(C5):DT(D8) DT(C6):DA(D7) DG(C7):5CM(D6) DT(C8):DA(D5) DA(C9):DT(D4) DG(C10):DC(D3) DG(C11):DC(D2) DC(C12):DG(D1) chainA ( 52) LYS595 0 2 1 0 0 0 0 0 0 0 0 0 prot.sequence rriatpeevrlplqhgwrrevrikkgshrwqgetwyygpcgkrmkqfpeviKylsrnvvhsvrrehfsfsprmpvgdffeerdtpeglqwvqlsaeeipsriqaitg >7fj2_AB:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF FOXM1 HOMODIMER BOUND TO A PALINDROMIC DNA SITE organism=HOMO SAPIENS DNA sequence DA(C7):DT(D26) DC(C8):DG(D25) DC(C9):DG(D24) DG(C10):DC(D23) DT(C11):DA(D22) DA(C12):DT(D21) DA(C13):DT(D20) DA(C14):DT(D19) DC(C15):DG(D18) DA(C16):DT(D17) DT(C17):DA(D16) DG(C18):DC(D15) DT(C19):DA(D14) DT(C20):DA(D13) DT(C21):DA(D12) DA(C22):DT(D11) DC(C23):DG(D10) DG(C24):DC(D9) DG(C25):DC(D8) DT(C26):DA(D7) chainA ( 51) ASN283 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) SER284 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG286 0 0 0 0 0 0 0 1 8 11 0 0 0 0 0 0 0 0 0 0 ( 55) HIS287 0 0 0 1 13 8 11 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) SER290 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LEU291 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 48) ASN283 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 ( 49) SER284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 51) ARG286 0 0 0 0 0 0 0 0 0 0 15 11 3 0 0 0 0 0 0 0 ( 52) HIS287 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 15 1 0 0 0 ( 53) ASN288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 55) SER290 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 ( 56) LEU291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence vserppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwkNSiRHnlSLhdmfvretsangkvsfwtih/rppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwkNSiRHNlSLhdmfvretsangkvsfwtih >7fj2_EF:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF FOXM1 HOMODIMER BOUND TO A PALINDROMIC DNA SITE organism=HOMO SAPIENS DNA sequence DA(G7):DT(H26) DC(G8):DG(H25) DC(G9):DG(H24) DG(G10):DC(H23) DT(G11):DA(H22) DA(G12):DT(H21) DA(G13):DT(H20) DA(G14):DT(H19) DC(G15):DG(H18) DA(G16):DT(H17) DT(G17):DA(H16) DG(G18):DC(H15) DT(G19):DA(H14) DT(G20):DA(H13) DT(G21):DA(H12) DA(G22):DT(H11) DC(G23):DG(H10) DG(G24):DC(H9) DG(G25):DC(H8) DT(G26):DA(H7) chainE ( 51) ASN283 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) SER284 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG286 0 0 0 0 0 0 0 1 14 9 0 0 0 0 0 0 0 0 0 0 ( 55) HIS287 0 0 0 0 15 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) SER290 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 52) ASN283 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 0 ( 53) SER284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 55) ARG286 0 0 0 0 0 0 0 0 0 0 6 7 1 0 0 0 0 0 0 0 ( 56) HIS287 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 15 2 0 0 0 ( 59) SER290 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 ( 60) LEU291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence vserppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwkNSiRHnlSlhdmfvretsangkvsfwtih/svserppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwkNSiRHnlSLhdmfvretsangkvsfwtih >7fj2_F:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF FOXM1 HOMODIMER BOUND TO A PALINDROMIC DNA SITE organism=? DNA sequence DA(H7):DT(G26) DC(H8):DG(G25) DC(H9):DG(G24) DG(H10):DC(G23) DT(H11):DA(G22) DA(H12):DT(G21) DA(H13):DT(G20) DA(H14):DT(G19) DC(H15):DG(G18) DA(H16):DT(G17) DT(H17):DA(G16) DG(H18):DC(G15) DT(H19):DA(G14) DT(H20):DA(G13) DT(H21):DA(G12) DA(H22):DT(G11) DC(H23):DG(G10) DG(H24):DC(G9) DG(H25):DC(G8) DT(H26):DA(G7) chainF ( 52) ASN283 0 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) SER284 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ARG286 0 0 0 0 0 0 0 1 7 6 0 0 0 0 0 0 0 0 0 0 ( 56) HIS287 0 0 0 2 15 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) SER290 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU291 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence svserppysymamiqfainsterkrmtlkdiytwiedhfpyfkhiakpgwkNSiRHnlSLhdmfvretsangkvsfwtih >7fji_ABE: title=HUMAN POL III ELONGATION COMPLEX organism=HOMO SAPIENS DNA sequence DC(Y-1):DG(X45) DA(Y0):DT(X44) DG(Y1):DC(X43) DC(Y2):DG(X42) DG(Y3):DC(X41) DG(Y4):DC(X40) DC(Y5):DG(X39) DT(Y6):DA(X38) DC(Y7):DG(X37) DT(Y8):DA(X36) DA(Y9):DT(X35) DG(Y10):DC(X34) DT(Y11):DA(X33) DC(Y12):DG(X32) DT(Y13):DA(X31) DG(Y14):DC(X30) DT(Y15):DT(X29) chainA (1295) ARG1305 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainB (178) ARG195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (438) ARG463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 chainE prot.sequence keqfretdvakkishicfgmkspeemrqqahiqvvsknlysqdnqhapllygvldhrmgtsekdrpcetcgknladclghygyidlelpcfhvgyfravigilqmicktcchimlsqeekkqfldylkrpgltylqkrglkkkisdkcrkknichhcgafngtvkkcgllkiihekyktnkkvvdpivsnflqsfetaiehnkevepllgraqenlnplvvlnlfkripaedvplllmnpeagkpsdliltrllvpplcirpsvneddltmklteiiflndvikkhrisgaktqmimedwdflqlqcalyinselsgiplnmapkkwtrgfvqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlridevavpvhvakiltfpekvnkaninflrklvqngpevhpganfiqqrhtqmkrflkygnrekmaqelkygdiverhlidgdvvlfnrqpslhklsimahlarvkphrtfrfnecvctpynadfdgdemnlhlpqteeakaealvlmgtkanlvtprngepliaaiqdfltgaylltlkdtffdrakacqiiasilvgkdekikvrlppptilkpvtlwtgkqifsvilrpsddnpvranlrtkgkqycgkgedlcandsyvtiqnselmsgsmdkgtlgsgsknnifyillrdwgqneaadamsrlarlapvylsnrgfsigigdvtpgqgllkakyellnagykkcdeyiealntgklqqqpgctaeetlealilkelsvirdhagsaclreldksnspltmalcgskgsfinisqmiacvgqqaisgsrvpdgfenrslphfekhsklpaakgfvansfysgltptefffhtmagreglvdtavktaetgymqrrlvksledlcsqydltvrsstgdiiqfiyggdgldpaamegkdeplefkrvldnikavfpcpsepalsknelilttesimkkseflccqdsflqeikkfikgvsekikktrdkygindngtteprvlyqldritptqvekfletcrdkymraqmepgsavgalcaqsigepgtqmtlktfhfagvasmnitlgvprikeiinaskaistpiitaqldkdddadyarlvkgriektllgeiseyieevflpddcfilvklslerirllrlevnaetvrysictsklrvkpgdvavhgeavvcvtprenskssmyyvlqflkedlpkvvvqgipevsravihideqsgkekykllvegdnlravmathgvkgtrttsnntyevektlgieaarttiineiqytmvnhgmsidrrhvmllsdlmtykgevlgitRfglakmkesvlmlasfektadhlfdaayfgqkdsvcgvseciimgipmnigtglfkllhkadrdpnppkrpl/apiptveekwrllpaflkvkglvkqhidsfnyfinveikkimkanekvtsdadpmwylkylniyvglpdveesfnvtrpvsphecrlrdmtysapitvdieytrgsqriirnalpigrmpimlrssncvltgktpaefaklnecpldpggyfivkgvekviliqeqlsknriiveadRkgavgasvtssthekksrtnmavkqgrfylrhntlsedipiviifkamgvesdqeivqmigteehvmaafgpsleecqkaqiftqmqalkyignkvrrqktkieearellastilthvpvkefnfrakciytavmvrrvilaqgdnkvddrdyygnkrlelagqllsllfedlfkkfnsemkkiadqvipkqraaqfdvvkhmrqdqitngmvnaistgnwslkrfkmdrqgvtqvlsrlsyisalgmmtrissqfektRkvsgprslqpsqwgmlcpsdtpegeacglvknlalmthittdmedgpivklasnlgvedvnllcgeelsypnvflvflngnilgvirdhkklvntfrlmrragyinefvsistnltdrcvyissdggrlcrpyiivkkqkpavtnkhmeelaqgyrnfedflheslveyldvneendcnialyehtinkdtthleiepftllgvcaglipyphhnqsprntyqcamgkqamgtigynqrnridtlmyllaypqkpmvktktieliefeklpagqnatvavmsysgydiedalvlnkasldrgfgrclvyknakctlkrytnqtfdkvmgpmldaatrkpiwrheildadgicspgekvenkqvlvnksmptvtqqpqykdvpitykgatdsyiekvmissnaedaflikmllrqtrrpeigdkfssrhgqkgvcglivpqedmpfcdsgicpdiimnphgfpsrmtvgkliellagkagvldgrfhygtafggskvkdvcedlvrhgynylgkdyvtsgitgepleayiyfgpvyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcligygasmlllerlmissdafevdvcgqcgllgysgwchycksschvsslripyackllfqelqsmniiprlklskyn/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqsgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpVaryfgikrgqvvkiirpsetagryityrlvq >7fjj_ABE: title=HUMAN POL III PRE-TERMINATION COMPLEX organism=HOMO SAPIENS DNA sequence DT(X29):DT(Y15) DC(X30):DG(Y14) DA(X31):DT(Y13) DG(X32):DC(Y12) DA(X33):DT(Y11) DC(X34):DG(Y10) DT(X35):DA(Y9) DG(X37):DC(Y7) DA(X38):DT(Y6) DG(X39):DC(Y5) DC(X40):DG(Y4) DC(X41):DG(Y3) DC(X43):DG(Y1) DT(X44):DA(Y0) DG(X45):DC(Y-1) chainA chainB (173) ARG195 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) LYS461 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) ARG463 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence eqfretdvakkishicfgmkspeemrqqahiqvvsknlysqdnqhapllygvldhrmgtsekdrpcetcgknladclghygyidlelpcfhvgyfravigilqmicktcchimlsqeekkqfldylkrpgltylqkrglkkkisdkcrkknichhcgafngtvkkcgllkiihekyktnkkvvdpivsnflqsfetaiehnkevepllgraqenlnplvvlnlfkripaedvplllmnpeagkpsdliltrllvpplcirpdltmklteiiflndvikkhrisgaktqmimedwdflqlqcalyinselsgiplnmapkkwtrgfvqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlridevavpvhvakiltfpekvnkaninflrklvqngpevhpganfiqqrhtqmkrflkygnrekmaqelkygdiverhlidgdvvlfnrqpslhklsimahlarvkphrtfrfnecvctpynadfdgdemnlhlpqteeakaealvlmgtkanlvtprngepliaaiqdfltgaylltlkdtffdrakacqiiasilvgkdekikvrlppptilkpvtlwtgkqifsvilrpsddnpvranlrtkgkqycgkgedlcandsyvtiqnselmsgsmdkgtlgsgsknnifyillrdwgqneaadamsrlarlapvylsnrgfsigigdvtpgqgllkakyellnagykkcdeyiealntgklqqqpgctaeetlealilkelsvirdhagsaclreldksnspltmalcgskgsfinisqmiacvgqqaisgsrvpdgfenrslphfekhsklpaakgfvansfysgltptefffhtmagreglvdtavktaetgymqrrlvksledlcsqydltvrsstgdiiqfiyggdgldpaamegkdeplefkrvldnikavfpcpsepalsknelilttesimkkseflccqdsflqeikkfikgvsekikktrdkygindngtteprvlyqldritptqvekfletcrdkymraqmepgsavgalcaqsigepgtqmtlktfhfagvasmnitlgvprikeiinaskaistpiitaqldkdddadyarlvkgriektllgeiseyieevflpddcfilvklslerirllrlevnaetvrysictsklrvkpgdvavhgeavvcvtprenskssmyyvlqflkedlpkvvvqgipevsravihideqsgkekykllvegdnlravmathgvkgtrttsnntyevektlgieaarttiineiqytmvnhgmsidrrhvmllsdlmtykgevlgitrfglakmkesvlmlasfektadhlfdaayfgqkdsvcgvseciimgipmnigtglfkllhkadrdpnppkrp/veekwrllpaflkvkglvkqhidsfnyfinveikkimkanekvtsdadpmwylkylniyvglpdveesfnvtrpvsphecrlrdmtysapitvdieytrgsqriirnalpigrmpimlrssncvltgktpaefaklnecpldpggyfivkgvekviliqeqlsknriiveadRkgavgasvtssthekksrtnmavkqgrfylrhntlsedipiviifkamgvesdqeivqmigteehvmaafgpsleecqkaqiftqmqalkyignkvrrqrmwgggpkktkieearellastilthvpvkefnfrakciytavmvrrvilaqgdnkvddrdyygnkrlelagqllsllfedlfkkfnsemkkiadqvipkqraaqfdvvkhmrqdqitngmvnaistgnwslkrfkmdrqgvtqvlsrlsyisalgmmtrissqfeKtRkvsgprslqpsqwgmlcpsdtpegeacglvknlalmthittdmedgpivklasnlgvedvnllcgeelsypnvflvflngnilgvirdhkklvntfrlmrragyinefvsistnltdrcvyissdggrlcrpyiivkkqkpavtnkhmeelaqgyrnfedflheslveyldvneendcnialyehtinkdtthleiepftllgvcaglipyphhnqsprntyqcamgkqamgtigynqrnridtlmyllaypqkpmvktktieliefeklpagqnatvavmsysgydiedalvlnkasldrgfgrclvyknakctlkrytnqtfdkvmgpmldaatrkpiwrheildadgicspgekvenkqvlvnksmptqykdvpitykgatdsyiekvmissnaedaflikmllrqtrrpeigdkfssrhgqkgvcglivpqedmpfcdsgicpdiimnphgfpsrmtvgkliellagkagvldgrfhygtafggskvkdvcedlvrhgynylgkdyvtsgitgepleayiyfgpvyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcligygasmlllerlmissdafevdvcgqcgllgysgwchycksschvsslripyackllfqelqsmniiprlklskyn/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqsgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriQagdpvaryfgikrgqvvkiirpsetagryityrlvq >7fjj_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=HUMAN POL III PRE-TERMINATION COMPLEX organism=HOMO SAPIENS DNA sequence DT(X29):DT(Y15) DC(X30):DG(Y14) DA(X31):DT(Y13) DG(X32):DC(Y12) DA(X33):DT(Y11) DC(X34):DG(Y10) DT(X35):DA(Y9) DG(X37):DC(Y7) DA(X38):DT(Y6) DG(X39):DC(Y5) DC(X40):DG(Y4) DC(X41):DG(Y3) DC(X43):DG(Y1) DT(X44):DA(Y0) DG(X45):DC(Y-1) chainB (173) ARG195 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) LYS461 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) ARG463 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence veekwrllpaflkvkglvkqhidsfnyfinveikkimkanekvtsdadpmwylkylniyvglpdveesfnvtrpvsphecrlrdmtysapitvdieytrgsqriirnalpigrmpimlrssncvltgktpaefaklnecpldpggyfivkgvekviliqeqlsknriiveadRkgavgasvtssthekksrtnmavkqgrfylrhntlsedipiviifkamgvesdqeivqmigteehvmaafgpsleecqkaqiftqmqalkyignkvrrqrmwgggpkktkieearellastilthvpvkefnfrakciytavmvrrvilaqgdnkvddrdyygnkrlelagqllsllfedlfkkfnsemkkiadqvipkqraaqfdvvkhmrqdqitngmvnaistgnwslkrfkmdrqgvtqvlsrlsyisalgmmtrissqfeKtRkvsgprslqpsqwgmlcpsdtpegeacglvknlalmthittdmedgpivklasnlgvedvnllcgeelsypnvflvflngnilgvirdhkklvntfrlmrragyinefvsistnltdrcvyissdggrlcrpyiivkkqkpavtnkhmeelaqgyrnfedflheslveyldvneendcnialyehtinkdtthleiepftllgvcaglipyphhnqsprntyqcamgkqamgtigynqrnridtlmyllaypqkpmvktktieliefeklpagqnatvavmsysgydiedalvlnkasldrgfgrclvyknakctlkrytnqtfdkvmgpmldaatrkpiwrheildadgicspgekvenkqvlvnksmptqykdvpitykgatdsyiekvmissnaedaflikmllrqtrrpeigdkfssrhgqkgvcglivpqedmpfcdsgicpdiimnphgfpsrmtvgkliellagkagvldgrfhygtafggskvkdvcedlvrhgynylgkdyvtsgitgepleayiyfgpvyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcligygasmlllerlmissdafevdvcgqcgllgysgwchycksschvsslripyackllfqelqsmniiprlklskyn >7fvs_A:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF S. AUREUS GYRASE IN COMPLEX WITH 4-[[1-[(1- CHLORO-6,7-DIHYDRO-5H-CYCLOPENTA[C]PYRIDIN-6-YL)METHYL]AZETIDIN-3- YL]METHYLAMINO]-6-FLUOROCHROMEN-2-ONE organism=? DNA sequence DG(C2):DC(D19) DC(C3):DG(D18) DC(C4):DG(D17) DG(C5):DC(D16) DT(C6):DA(D15) DA(C7):DT(D14) DG(C8):DC(D13) DG(C9):DC(D12) DG(C10):DC(D11) DC(C11):DG(D10) DC(C12):DG(D9) DC(C13):DG(D8) DT(C14):DA(D7) DA(C15):DT(D6) DC(C16):DG(D5) DG(C17):DC(D4) DG(C18):DC(D3) DC(C19):DG(D2) DT(C20):DA(D1) chainA ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 (213) ARG1033 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (265) SER1085 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (302) ARG1122 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (355) ILE1175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 28 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >7fvs_AB:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF S. AUREUS GYRASE IN COMPLEX WITH 4-[[1-[(1- CHLORO-6,7-DIHYDRO-5H-CYCLOPENTA[C]PYRIDIN-6-YL)METHYL]AZETIDIN-3- YL]METHYLAMINO]-6-FLUOROCHROMEN-2-ONE organism=? DNA sequence DA(D1):DT(C20) DG(D2):DC(C19) DC(D3):DG(C18) DC(D4):DG(C17) DG(D5):DC(C16) DT(D6):DA(C15) DA(D7):DT(C14) DG(D8):DC(C13) DG(D9):DC(C12) DG(D10):DC(C11) DC(D11):DG(C10) DC(D12):DG(C9) DC(D13):DG(C8) DT(D14):DA(C7) DA(D15):DT(C6) DC(D16):DG(C5) DG(D17):DC(C4) DG(D18):DC(C3) DC(D19):DG(C2) chainA ( 44) LYS460 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 (213) ARG1033 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) SER1085 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (302) ARG1122 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (355) ILE1175 0 0 0 28 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 (265) SER1085 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (268) GLU1088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (302) ARG1122 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (355) ILE1175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 26 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldYamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg >7fvt_A:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF S. AUREUS GYRASE IN COMPLEX WITH 6-[5-[2-[(4- CHLORO-2,3-DIHYDRO-1H-INDEN-2-YL)METHYLAMINO]ETHYL]-2-OXO-1,3- OXAZOLIDIN-3-YL]-4H-PYRIDO[3,2-B][1,4]OXAZIN-3-ONE organism=? DNA sequence DA(D1):DT(C20) DG(D2):DC(C19) DC(D3):DG(C18) DC(D4):DG(C17) DG(D5):DC(C16) DT(D6):DA(C15) DA(D7):DT(C14) DG(D8):DC(C13) DG(D9):DC(C12) DG(D10):DC(C11) DC(D11):DG(C10) DC(D12):DG(C9) DC(D13):DG(C8) DT(D14):DA(C7) DA(D15):DT(C6) DC(D16):DG(C5) DG(D17):DC(C4) DG(D18):DC(C3) DC(D19):DG(C2) chainA ( 42) ARG458 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 (265) SER1085 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (302) ARG1122 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (355) ILE1175 0 0 0 20 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >7fvt_AB:Type_II_DNA_topoisomerase; title=CRYSTAL STRUCTURE OF S. AUREUS GYRASE IN COMPLEX WITH 6-[5-[2-[(4- CHLORO-2,3-DIHYDRO-1H-INDEN-2-YL)METHYLAMINO]ETHYL]-2-OXO-1,3- OXAZOLIDIN-3-YL]-4H-PYRIDO[3,2-B][1,4]OXAZIN-3-ONE organism=? DNA sequence DG(C2):DC(D19) DC(C3):DG(D18) DC(C4):DG(D17) DG(C5):DC(D16) DT(C6):DA(D15) DA(C7):DT(D14) DG(C8):DC(D13) DG(C9):DC(D12) DG(C10):DC(D11) DC(C11):DG(D10) DC(C12):DG(D9) DC(C13):DG(D8) DT(C14):DA(D7) DA(C15):DT(D6) DC(C16):DG(D5) DG(C17):DC(D4) DG(C18):DC(D3) DC(C19):DG(D2) DT(C20):DA(D1) chainA ( 42) ARG458 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 (265) SER1085 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (302) ARG1122 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (355) ILE1175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 20 0 0 0 chainB ( 42) ARG458 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 ( 44) LYS460 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 (265) SER1085 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (268) GLU1088 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) ARG1092 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) ARG1122 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (355) ILE1175 0 0 23 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdSSiyeamvrmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplRgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavynernitsemresfldYamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvRmaqdfsyryplvdgqgnfgsmdgdgaaamRftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiqlg >7gat_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=SOLUTION NMR STRUCTURE OF THE L22V MUTANT DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13 BP DNA CONTAINING A TGATA SITE, 34 STRUCTURES organism=EMERICELLA NIDULANS DNA sequence DC(B101):DG(C126) DA(B102):DT(C125) DG(B103):DC(C124) DT(B104):DA(C123) DG(B105):DC(C122) DA(B106):DT(C121) DT(B107):DA(C120) DA(B108):DT(C119) DG(B109):DC(C118) DA(B110):DT(C117) DG(B111):DC(C116) DA(B112):DT(C115) DC(B113):DG(C114) chainA ( 22) VAL22 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 24) ARG24 0 0 0 8 10 1 0 0 0 0 0 0 0 ( 38) LEU38 0 0 0 0 0 4 8 0 0 0 0 0 0 ( 42) LEU42 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 59) ARG59 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence mkngeqngpttctncftqttpVwRrnpegqplcnacgLflkLhgvvrplslktdvikkRnrnsans >7ice_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF CACL2 organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 3 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7icf_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CDCL2 (0.1 MILLIMOLAR) (FOUR- DAY SOAK) organism=Homo sapiens DNA sequence DC(T2):DG(P6) DA(T3):DT(P5) DT(T4):DA(P4) DC(T5):DG(P3) DT(T6):DA(P2) DG(T7):DC(P1) chainA (226) LYS234 4 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7icg_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF CDCL2 organism=Homo sapiens DNA sequence DC(T2):DG(P6) DA(T3):DT(P5) DT(T4):DA(P4) DC(T5):DG(P3) DT(T6):DA(P2) DG(T7):DC(P1) chainA (226) LYS234 4 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7ich_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF COCL2 organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 3 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7ici_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CRCL3 (0.1 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 3 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7icj_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CUCL2 (0.1 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 1 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7ick_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF MGCL2 organism=Homo sapiens DNA sequence DC(T2):DG(P6) DA(T3):DT(P5) DT(T4):DA(P4) DC(T5):DG(P3) DT(T6):DA(P2) DG(T7):DC(P1) chainA (226) LYS234 4 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7icl_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (0.1 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 2 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7icm_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (1.0 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 3 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7icn_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF NICL2 organism=Homo sapiens DNA sequence DC(T2):DG(P6) DA(T3):DT(P5) DT(T4):DA(P4) DC(T5):DG(P3) DT(T6):DA(P2) DG(T7):DC(P1) chainA (226) LYS234 5 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7ico_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2 organism=Homo sapiens DNA sequence DC(T2):DG(P6) DA(T3):DT(P5) DT(T4):DA(P4) DC(T5):DG(P3) DT(T6):DA(P2) DG(T7):DC(P1) chainA (226) LYS234 1 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7icp_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF ZNCL2 (0.01 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 4 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7icq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2 organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 3 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7icr_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2 organism=Homo sapiens DNA sequence DC(T2):DG(P6) DA(T3):DT(P5) DT(T4):DA(P4) DC(T5):DG(P3) DT(T6):DA(P2) DG(T7):DC(P1) chainA (226) LYS234 3 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7ics_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2 organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 3 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7ict_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2 AND MGCL2 organism=Homo sapiens DNA sequence DC(T2):DG(P6) DA(T3):DT(P5) DT(T4):DA(P4) DC(T5):DG(P3) DT(T6):DA(P2) DG(T7):DC(P1) chainA (226) LYS234 2 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7icu_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CDCL2 (0.1 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 1 3 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7icv_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (0.1 MILLIMOLAR) AND IN THE ABSENCE OF NACL organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 3 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7jgr_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF DROSOPHILA ORC BOUND TO DNA (84 BP) AND CDC6 organism=? DNA sequence DA(I35):DT(H34) DA(I36):DT(H33) DA(I37):DT(H32) DA(I38):DT(H31) DG(I39):DC(H30) DC(I40):DG(H29) DA(I41):DT(H28) DA(I42):DT(H27) DG(I43):DC(H26) DC(I44):DG(H25) DA(I45):DT(H24) DT(I46):DA(H23) DA(I47):DT(H22) DA(I48):DT(H21) DA(I49):DT(H20) DA(I50):DT(H19) DG(I51):DC(H18) DA(I52):DT(H17) DT(I53):DA(H16) DC(I54):DG(H15) DT(I55):DA(H14) DA(I56):DT(H13) DA(I57):DT(H12) DA(I58):DT(H11) DC(I59):DG(H10) DA(I60):DT(H9) DT(I61):DA(H8) DA(I62):DT(H7) DA(I63):DT(H6) DA(I64):DT(H5) DA(I65):DT(H4) DT(I66):DA(H3) DC(I67):DG(H2) DT(I68):DA(H1) chainA (174) ARG692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpsqkmkkiragelspsmqqrtdlpakdsskselqlareqlhvsvvpkslpcrerefeniyaflegkiqdqcggcmyvsgvpgtgktatvtgvirtlqrmakqnelpafeyleingmrlteprqayvqiykqltgktvsweqahallekrfttpaprrvttvllvdeldilcnRrqdvvynlldwptksaaklvvvtiantmdlperllmgkvtsrlgltrltfqpyshkqlqeivtarlggsetfkgeavqlvarkvaavsgdarraldicrrateiadtaavkcvtmlhvqqalaemiasakvqairncsrmeqiflqaiaaevtrtgveettfmgvyqqvetiaafmgvtfpppgralrlcsklgaerliisehsrndlfqkillnvsaddihyalrv >7jgr_ABCDEG:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF DROSOPHILA ORC BOUND TO DNA (84 BP) AND CDC6 organism=DROSOPHILA MELANOGASTER DNA sequence DA(I35):DT(H34) DA(I36):DT(H33) DA(I37):DT(H32) DA(I38):DT(H31) DG(I39):DC(H30) DC(I40):DG(H29) DA(I41):DT(H28) DA(I42):DT(H27) DG(I43):DC(H26) DC(I44):DG(H25) DA(I45):DT(H24) DT(I46):DA(H23) DA(I47):DT(H22) DA(I48):DT(H21) DA(I49):DT(H20) DA(I50):DT(H19) DG(I51):DC(H18) DA(I52):DT(H17) DT(I53):DA(H16) DC(I54):DG(H15) DT(I55):DA(H14) DA(I56):DT(H13) DA(I57):DT(H12) DA(I58):DT(H11) DC(I59):DG(H10) DA(I60):DT(H9) DT(I61):DA(H8) DA(I62):DT(H7) DA(I63):DT(H6) DA(I64):DT(H5) DA(I65):DT(H4) DT(I66):DA(H3) DC(I67):DG(H2) DT(I68):DA(H1) chainB chainC (602) ARG711 0 0 0 0 0 0 0 0 2 7 15 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE chainA (174) ARG692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG prot.sequence tpsqkmkkiragelspsmqqrtdlpakdsskselqlareqlhvsvvpkslpcrerefeniyaflegkiqdqcggcmyvsgvpgtgktatvtgvirtlqrmakqnelpafeyleingmrlteprqayvqiykqltgktvsweqahallekrfttpaprrvttvllvdeldilcnRrqdvvynlldwptksaaklvvvtiantmdlperllmgkvtsrlgltrltfqpyshkqlqeivtarlggsetfkgeavqlvarkvaavsgdarraldicrrateiadtaavkcvtmlhvqqalaemiasakvqairncsrmeqiflqaiaaevtrtgveettfmgvyqqvetiaafmgvtfpppgralrlcsklgaerliisehsrndlfqkillnvsaddihyalrv/fvpesdgyfhsaehegsinaimeeyrsyfpkwmcilnegfnillyglgskhqllqsfhrevlhkqtvlvvngffpsltikdmldsitsdildagispanpheavdmieeefalipethlflivhnldgamlrnvkaqailsrlaripnihllasidhintpllwdqgklcsfnFswwdcttmlpytnetafensalssmrsvfsslttnsrgiymlivkyqlknkgmpfrdlysscreaflvssdlalraqltefldhklvkskrsvdgseqltipidgallqqfleeqe/mdptisvskgcfvykngatrsllgkevvqqpfyeeyrkawnqindhiadlqhrsyartleqlvdfvvgqaerevlptaalltginqpdhlsqftaltqrlhaqraamvcvlqsrdcatlkaavetlvfglvednaeverlrrsqctmkqlkswytnnfdserrqlvvilpdfecfnasvlqdlililsahcgslpfvlvlgvatamtavhgtlpyhvsskirlrvfqtqaaptglnevldkvllspkyafhlsgktfkflthiflyydfsihgfiqgfkyclmehffggnafalctdyskalgrikqlthedmetirrlpsfrpyveqickriiavltdddylkkklpqllrdcllhfllfrcslefltelvgdlprcplgklrrelyvnclnraiistpeykeclqmlsflskdefvakvnralerteqflveeiaplelgeactavlrpkleairlavdevvkagralqktlqlietqivqdhlralqdappihelfvfsdiatvrrniigapraalhtalnnphfymqckccelqdqsllvgtlpdlsvvyklhlecgrminlfdwlqafrsvvpqiqarftravaelqflgyikmskRktdhatrltw/peadrelvsirrflkerlqrdyttlrgyakersnvrlllqrtaemgesnsllllgprgsgkttlinsvladllpnksfgentlivhldgnlhtddrvalksitvqmqlenaadgkvfgsfaenlafllqclkaggkhsksvifileefdlfcahhnqtllynlfdvsqsaqapicvlgvtcrldviellekrvksrfshrqvflfpslrrfedyvdlcrdllslptgnslllaaekiynlqniyfsrnhfdpgeygfsprlrdawnkqickvlatqqarstlqalhdfdiseaylknflfrlvahlrpqsphitaekmaavgsqfegddkiellcglsvlelcliiaikhhsqiydrdsfnfeiiyarfskfakvsttmqaversivlkafehlriaelimpltvqkefemhklaltysqihhcmqryqalptevaqwaqs/meaicssleplfpcreaaietlgeligdssetypsaiylfghsgtgktaltraflkecgkrqnvrtahlnaiecyttkimleilldslapdqgdalkvdnmldfveqlrrqaatrvedqgfliavdnaerlrdmdanvlpvllrlqeltnlnlcvillsqlpfekfynktglseivclhlaqynkaetqrilgsdfqqvrnqlleqkkrleicqeavtedfynnylnlflsvfykacrdvpelqltarkclstylepvldgsrlwrhiagplrsaltqiymrieslelpyyakflliaaflashnaakqdkrlfvklgpksfsidrllaifyaileekvgltcnllsqistlvhlnllsfvsgeqnimegsarlqctiglefvlqigkvvgfnvrqyl/rnkyqnarrvlnsaetqnlpgresqlqelreffsnhlesqtsgslyvsgqpgtgktaclslllrdpdfskrlqrvyinctsiasvgavykklctelqlkvsgrterdhleaiqrhlktakrmlllvldeidqlctsrqevlytifewpalpgsrillvgiansldltdralmrlnarcelkprlmhfppyskqqiveifksrlaeaevldvfppvtlqllaakvsaisgdvrraldigrrvveiaeqqkrlkpvqvtqvaavlnkvyfplqqklmlctlvlmlrnernkdismgrlhevyrrvcakrnilaldqaeftgtvdlvetrgilrimrkkeprlhkvllqwdeeevhaalsdkqliasilsdtacl >7jgr_C: title=STRUCTURE OF DROSOPHILA ORC BOUND TO DNA (84 BP) AND CDC6 organism=? DNA sequence DA(I35):DT(H34) DA(I36):DT(H33) DA(I37):DT(H32) DA(I38):DT(H31) DG(I39):DC(H30) DC(I40):DG(H29) DA(I41):DT(H28) DA(I42):DT(H27) DG(I43):DC(H26) DC(I44):DG(H25) DA(I45):DT(H24) DT(I46):DA(H23) DA(I47):DT(H22) DA(I48):DT(H21) DA(I49):DT(H20) DA(I50):DT(H19) DG(I51):DC(H18) DA(I52):DT(H17) DT(I53):DA(H16) DC(I54):DG(H15) DT(I55):DA(H14) DA(I56):DT(H13) DA(I57):DT(H12) DA(I58):DT(H11) DC(I59):DG(H10) DA(I60):DT(H9) DT(I61):DA(H8) DA(I62):DT(H7) DA(I63):DT(H6) DA(I64):DT(H5) DA(I65):DT(H4) DT(I66):DA(H3) DC(I67):DG(H2) DT(I68):DA(H1) chainC (602) ARG711 0 0 0 0 0 0 0 0 2 7 15 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdptisvskgcfvykngatrsllgkevvqqpfyeeyrkawnqindhiadlqhrsyartleqlvdfvvgqaerevlptaalltginqpdhlsqftaltqrlhaqraamvcvlqsrdcatlkaavetlvfglvednaeverlrrsqctmkqlkswytnnfdserrqlvvilpdfecfnasvlqdlililsahcgslpfvlvlgvatamtavhgtlpyhvsskirlrvfqtqaaptglnevldkvllspkyafhlsgktfkflthiflyydfsihgfiqgfkyclmehffggnafalctdyskalgrikqlthedmetirrlpsfrpyveqickriiavltdddylkkklpqllrdcllhfllfrcslefltelvgdlprcplgklrrelyvnclnraiistpeykeclqmlsflskdefvakvnralerteqflveeiaplelgeactavlrpkleairlavdevvkagralqktlqlietqivqdhlralqdappihelfvfsdiatvrrniigapraalhtalnnphfymqckccelqdqsllvgtlpdlsvvyklhlecgrminlfdwlqafrsvvpqiqarftravaelqflgyikmskRktdhatrltw >7jgs_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF DROSOPHILA ORC BOUND TO POLY(DA/DT) DNA AND CDC6 (CONFORMATION 2) organism=DROSOPHILA MELANOGASTER DNA sequence DA(I36):DT(H31) DA(I37):DT(H30) DA(I38):DT(H29) DA(I39):DT(H28) DA(I40):DT(H27) DA(I41):DT(H26) DA(I42):DT(H25) DA(I43):DT(H24) DA(I44):DT(H23) DA(I45):DT(H22) DA(I46):DT(H21) DA(I47):DT(H20) DA(I48):DT(H19) DA(I49):DT(H18) DA(I50):DT(H17) DA(I51):DT(H16) DA(I52):DT(H15) DA(I53):DT(H14) DA(I54):DT(H13) DA(I55):DT(H12) DA(I56):DT(H11) DA(I57):DT(H10) DA(I58):DT(H9) DA(I59):DT(H8) DA(I60):DT(H7) DA(I61):DT(H6) DA(I62):DT(H5) DA(I63):DT(H4) DA(I64):DT(H3) DA(I65):DT(H2) DA(I66):DT(H1) DA(I67):DT(H0) DA(I68):DT(H-1) DA(I69):DT(H-2) DA(I70):DT(H-3) chainA (174) ARG692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpsqkmkkiragelspsmqqrtdlpakdsskselqlareqlhvsvvpkslpcrerefeniyaflegkiqdqcggcmyvsgvpgtgktatvtgvirtlqrmakqnelpafeyleingmrlteprqayvqiykqltgktvsweqahallekrfttpaprrvttvllvdeldilcnRrqdvvynlldwptksaaklvvvtiantmdlperllmgkvtsrlgltrltfqpyshkqlqeivtarlggsetfkgeavqlvarkvaavsgdarraldicrrateiadtaavkcvtmlhvqqalaemiasakvqairncsrmeqiflqaiaaevtrtgveettfmgvyqqvetiaafmgvtfpppgralrlcsklgaerliisehsrndlfqkillnvsaddihyalrv >7jgs_ABCDG:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF DROSOPHILA ORC BOUND TO POLY(DA/DT) DNA AND CDC6 (CONFORMATION 2) organism=DROSOPHILA MELANOGASTER DNA sequence DT(H-3):DA(I70) DT(H-2):DA(I69) DT(H-1):DA(I68) DT(H0):DA(I67) DT(H1):DA(I66) DT(H2):DA(I65) DT(H3):DA(I64) DT(H4):DA(I63) DT(H5):DA(I62) DT(H6):DA(I61) DT(H7):DA(I60) DT(H8):DA(I59) DT(H9):DA(I58) DT(H10):DA(I57) DT(H11):DA(I56) DT(H12):DA(I55) DT(H13):DA(I54) DT(H14):DA(I53) DT(H15):DA(I52) DT(H16):DA(I51) DT(H17):DA(I50) DT(H18):DA(I49) DT(H19):DA(I48) DT(H20):DA(I47) DT(H21):DA(I46) DT(H22):DA(I45) DT(H23):DA(I44) DT(H24):DA(I43) DT(H25):DA(I42) DT(H26):DA(I41) DT(H27):DA(I40) DT(H28):DA(I39) DT(H29):DA(I38) DT(H30):DA(I37) DT(H31):DA(I36) chainB chainC (604) ARG711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 chainD chainA (174) ARG692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG prot.sequence tpsqkmkkiragelspsmqqrtdlpakdsskselqlareqlhvsvvpkslpcrerefeniyaflegkiqdqcggcmyvsgvpgtgktatvtgvirtlqrmakqnelpafeyleingmrlteprqayvqiykqltgktvsweqahallekrfttpaprrvttvllvdeldilcnRrqdvvynlldwptksaaklvvvtiantmdlperllmgkvtsrlgltrltfqpyshkqlqeivtarlggsetfkgeavqlvarkvaavsgdarraldicrrateiadtaavkcvtmlhvqqalaemiasakvqairncsrmeqiflqaiaaevtrtgveettfmgvyqqvetiaafmgvtfpppgralrlcsklgaerliisehsrndlfqkillnvsaddihyalrv/fvpesdgyfhsaehegsinaimeeyrsyfpkwmcilnegfnillyglgskhqllqsfhrevlhkqtvlvvngffpsltikdmldsitsdildagispanpheavdmieeefalipethlflivhnldgamlrnvkaqailsrlaripnihllasidhintpllwdqgklcsfnFswwdcttmlpytnetafensalssmrsvfsslttnsrgiymlivkyqlknkgmpfrdlysscreaflvssdlalraqltefldhklvkskreqltipidgallqqfleeqe/mdptisvskgcfvykngatrsllgkevvqqpfyeeyrkawnqindhiadlqhrsyartleqlvdfvvgqaerevlptaalltginqpdhlsqftaltqrlhaqraamvcvlqsrdcatlkaavetlvfglvednaeverlrrsqctmkqlkswytnnfdserrqlvvilpdfecfnasvlqdlililsahcgslpfvlvlgvatamtavhgtlpyhvsskirlrvfqtqaaptglnevldkvllspkyafhlsgktfkflthiflyydfsihgfiqgfkyclmehffggnafalctdyskalgrikqlthedmetirrlpsfrpyveqindckriiavltdddylkkklpqllrdcllhfllfrcslefltelvgdlprcplgklrrelyvnclnraiistpeykeclqmlsflskdefvakvnralerteqflveeiaplelgeactavlrpkleairlavdevvkagralqktlqlietqivqdhlralqdappihelfvfsdiatvrrniigapraalhtalnnphfymqckccelqdqsllvgtlpdlsvvyklhlecgrminlfdwlqafrsvvpqiqarftravaelqflgyikmskRktdhatrltw/peadrelvsirrflkerlqrdyttlrgyakersnvrlllqrtaemgesnsllllgprgsgkttlinsvladllpnksfgentlivhldgnlhtddrvalksitvqmqlenaadgkvfgsfaenlafllqclkaggkhsksvifileefdlfcahhnqtllynlfdvsqsaqapicvlgvtcrldviellekrvksrfshrqvflfpslrrfedyvdlcrdllslptgnslllaaekiynlqniyfsrnhfdpgeygfsprlrdawnkqickvlatqqarstlqalhdfdiseaylknflfrlvahlrpqsphitaekmaavgsqfegddkiellcglsvlelcliiaikhhsqiydrdsfnfeiiyarfskfakvsttmqaversivlkafehlriaelimpltvqkefemhklaltysqihhcmqryqalptevaqwaqs/rnkyqnarrvlnsaetqnlpgresqlqelreffsnhlesqtsgslyvsgqpgtgktaclslllrdpdfskrlqrvyinctsiasvgavykklctelqlkvsgrterdhleaiqrhlktakrmlllvldeidqlctsrqevlytifewpalpgsrillvgiansldltdralmrlnarcelkprlmhfppyskqqiveifksrlaeaevldvfppvtlqllaakvsaisgdvrraldigrrvveiaeqqkrlkpvqvtqvaavlnkvyfplqqklmlctlvlmlrnernkdismgrlhevyrrvcakrnilaldqaeftgtvdlvetrgilrimrkkeprlhkvllqwdeeevhaalsdkqliasilsdtacl >7jk1_A: title=HUMAN PRIMPOL INSERTING CORRECT DCTP OPPOSITE THE 8-OXOGUANINE LESION organism=Homo sapiens DNA sequence DG(D3):DC(C15) DG(D4):DC(C14) DT(D5):DA(C13) DG(D6):DC(C12) DT(D7):DA(C11) DG(D8):DC(C10) DG(D9):DC(C9) DT(D10):DA(C8) DA(D11):DT(C7) DG(D12):DC(C6) DC(D13):DG(C5) DG(D14):DC(C4) chainA (209) ARG288 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence nrkweaklkqieeraseeppsiwrlfhrqaqafnfvksckedvhvfaleckvgdgqriylvttyaefwfyyksrknllhcyevipenavcklyfdlefnkpanpgadgkkmvallieyvckalqelygvncsaedvlnldsstdekfsrhlifqlhdvafkdnihvgnflrkilqpaldllpdlsflvvknnmgekhlfvdlgvytrnRnfrlyksskigkrvalevtednkffpiqskdvsdeyqyflsslvsnvrfsdtlriltcep >7jk2_ABDG:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF DROSOPHILA ORC BOUND TO POLY(DA/DT) DNA AND CDC6 (CONFORMATION 1) organism=DROSOPHILA MELANOGASTER DNA sequence DT(H-3):DA(I70) DT(H-2):DA(I69) DT(H-1):DA(I68) DT(H0):DA(I67) DT(H1):DA(I66) DT(H2):DA(I65) DT(H3):DA(I64) DT(H4):DA(I63) DT(H5):DA(I62) DT(H6):DA(I61) DT(H7):DA(I60) DT(H8):DA(I59) DT(H9):DA(I58) DT(H10):DA(I57) DT(H11):DA(I56) DT(H12):DA(I55) DT(H13):DA(I54) DT(H14):DA(I53) DT(H15):DA(I52) DT(H16):DA(I51) DT(H17):DA(I50) DT(H18):DA(I49) DT(H19):DA(I48) DT(H20):DA(I47) DT(H21):DA(I46) DT(H22):DA(I45) DT(H23):DA(I44) DT(H24):DA(I43) DT(H25):DA(I42) DT(H26):DA(I41) DT(H27):DA(I40) DT(H28):DA(I39) DT(H29):DA(I38) chainB chainD chainA (174) ARG692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 chainG prot.sequence tpsqkmkkiragelspsmqqrtdlpakdsskselqlareqlhvsvvpkslpcrerefeniyaflegkiqdqcggcmyvsgvpgtgktatvtgvirtlqrmakqnelpafeyleingmrlteprqayvqiykqltgktvsweqahallekrfttpaprrvttvllvdeldilcnRrqdvvynlldwptksaaklvvvtiantmdlperllmgkvtsrlgltrltfqpyshkqlqeivtarlggsetfkgeavqlvarkvaavsgdarraldicrrateiadtaavkcvtmlhvqqalaemiasakvqairncsrmeqiflqaiaaevtrtgveettfmgvyqqvetiaafmgvtfpppgralrlcsklgaerliisehsrndlfqkillnvsaddihyalrv/fvpesdgyfhsaehegsinaimeeyrsyfpkwmcilnegfnillyglgskhqllqsfhrevlhkqtvlvvngffpsltikdmldsitsdildagispanpheavdmieeefalipethlflivhnldgamlrnvkaqailsrlaripnihllasidhintpllwdqgklcsfnFswwdcttmlpytnetafensalssmrsvfsslttnsrgiymlivkyqlknkgmpfrdlysscreaflvssdlalraqltefldhklvkskreqltipidgallqqfleeqe/peadrelvsirrflkerlqrdyttlrgyakersnvrlllqrtaemgesnsllllgprgsgkttlinsvladllpnksfgentlivhldgnlhtddrvalksitvqmqlenaadgkvfgsfaenlafllqclkaggkhsksvifileefdlfcahhnqtllynlfdvsqsaqapIcvlgvtcrldviellekrvksrfshrqvflfpslrrfedyvdlcrdllslptgnslllaaekiynlqniyfsrnhfdpgeygfsprlrdawnkqickvlatqqarstlqalhdfdiseaylknflfrlvahlrpqsphitaekmaavgsqfegddkiellcglsvlelcliiaikhhsqiydrdsfnfeiiyarfskfakvsttmqaversivlkafehlriaelimpltvqkefemhklaltysqihhcmqryqalptevaqwaqs/rnkyqnarrvlnsaetqnlpgresqlqelreffsnhlesqtsgslyvsgqpgtgktaclslllrdpdfskrlqrvyinctsiasvgavykklctelqlkvsgrterdhleaiqrhlktakrmlllvldeidqlctsrqevlytifewpalpgsrillvgiansldltdralmrLnarcelkprlmhfppyskqqiveifksrlaeaevldvfppvtlqllaakvsaisgdvrraldigrrvveiaeqqkrlkpvqvtqvaavlnkvyfplqqklmlctlvlmlrnernkdismgrlhevyrrvcakrnilaldqaeftgtvdlvetrgilrimrkkeprlhkvllqwdeeevhaalsdkqliasilsdtacl >7jk3_ABCDEG:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF DROSOPHILA ORC BOUND TO GC-RICH DNA AND CDC6 organism=DROSOPHILA MELANOGASTER DNA sequence DT(H1):DA(I66) DC(H2):DG(I65) DC(H3):DG(I64) DA(H4):DT(I63) DA(H5):DT(I62) DG(H6):DC(I61) DT(H7):DA(I60) DG(H8):DC(I59) DC(H9):DG(I58) DG(H10):DC(I57) DG(H11):DC(I56) DG(H12):DC(I55) DG(H13):DC(I54) DC(H14):DG(I53) DA(H15):DT(I52) DC(H16):DG(I51) DT(H17):DA(I50) DC(H18):DG(I49) DG(H19):DC(I48) DT(H20):DA(I47) DC(H21):DG(I46) DT(H22):DA(I45) DG(H23):DC(I44) DT(H24):DA(I43) DG(H25):DC(I42) DA(H26):DT(I41) DG(H27):DC(I40) DG(H28):DC(I39) DG(H29):DC(I38) DG(H30):DC(I37) DG(H31):DC(I36) DC(H32):DG(I35) DT(H33):DA(I34) chainB chainC (604) ARG711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 chainD chainE chainA (174) ARG692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (103) ARG351 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpsqkmkkiragelspsmqqrtdlpakdsskselqlareqlhvsvvpkslpcrerefeniyaflegkiqdqcggcmyvsgvpgtgktatvtgvirtlqrmakqnelpafeyleingmrlteprqayvqiykqltgktvsweqahallekrfttpaprrvttvllvdeldilcnRrqdvvynlldwptksaaklvvvtiantmdlperllmgkvtsrlgltrltfqpyshkqlqeivtarlggsetfkgeavqlvarkvaavsgdarraldicrrateiadtaavkcvtmlhvqqalaemiasakvqairncsrmeqiflqaiaaevtrtgveettfmgvyqqvetiaafmgvtfpppgralrlcsklgaerliisehsrndlfqkillnvsaddihyalrv/fvpesdgyfhsaehegsinaimeeyrsyfpkwmcilnegfnillyglgskhqllqsfhrevlhkqtvlvvngffpsltikdmldsitsdildagispanpheavdmieeefalipethlflivhnldgamlrnvkaqailsrlaripnihllasidhintpllwdqgklcsfnFswwdcttmlpytnetafensalssmrsvfsslttnsrgiymlivkyqlknkgmpfrdlysscreaflvssdlalraqltefldhklvkskreqltipidgallqqfleeqe/mdptisvskgcfvykngatrsllgkevvqqpfyeeyrkawnqindhiadlqhrsyartleqlvdfvvgqaerevlptaalltginqpdhlsqftaltqrlhaqraamvcvlqsrdcatlkaavetlvfglvednaeverlrrsqctmkqlkswytnnfdserrqlvvilpdfecfnasvlqdlililsahcgslpfvlvlgvatamtavhgtlpyhvsskirlrvfqtqaaptglnevldkvllspkyafhlsgktfkflthiflyydfsihgfiqgfkyclmehffggnafalctdyskalgrikqlthedmetirrlpsfrpyveqindckriiavltdddylkkklpqllrdcllhfllfrcslefltelvgdlprcplgklrrelyvnclnraiistpeykeclqmlsflskdefvakvnralerteqflveeiaplelgeactavlrpkleairlavdevvkagralqktlqlietqivqdhlralqdappihelfvfsdiatvrrniigapraalhtalnnphfymqckccelqdqsllvgtlpdlsvvyklhlecgrminlfdwlqafrsvvpqiqarftravaelqflgyikmskRktdhatrltw/peadrelvsirrflkerlqrdyttlrgyakersnvrlllqrtaemgesnsllllgprgsgkttlinsvladllpnksfgentlivhldgnlhtddrvalksitvqmqlenaadgkvfgsfaenlafllqclkaggkhsksvifileefdlfcahhnqtllynlfdvsqsaqapicvlgvtcrldviellekrvksrfshrqvflfpslrrfedyvdlcrdllslptgnslllaaekiynlqniyfsrnhfdpgeygfsprlrdawnkqickvlatqqarstlqalhdfdiseaylknflfrlvahlrpqsphitaekmaavgsqfegddkiellcglsvlelcliiaikhhsqiydrdsfnfeiiyarfskfakvsttmqaversivlkafehlriaelimpltvqkefemhklaltysqihhcmqryqalptevaqwaqs/meaicssleplfpcreaaietlgeligdssetypsaiylfghsgtgktaltraflkecgkrqnvrtahlnaiecyttkimleilldslapdqgdalkvdnmldfveqlrrqaatrvedqgfliavdnaerlrdmdanvlpvllrlqeltnlnlcvillsqlpfekfynktglseivclhlaqynkaetqrilgsdfqqvrnqlleqkkrleicqeavtedfynnylnlflsvfykacrdvpelqltarkclstylepvldgsrlwrhiagplrsaltqiymrieslelpyyakflliaaflashnaakqdkrlfvklgpksfsidrllaifyaileekvgltcnllsqistlvhlnllsfvsgeqnimegsarlqctiglefvlqigkvvgfnvrqyl/rnkyqnarrvlnsaetqnlpgresqlqelreffsnhlesqtsgslyvsgqpgtgktaclslllrdpdfskrlqrvyinctsiasvgavykklctelqlkvsgRterdhleaiqrhlktakrmlllvldeidqlctsrqevlytifewpalpgsrillvgiansldltdralmrlnarcelkprlmhfppyskqqiveifksrlaeaevldvfppvtlqllaakvsaisgdvrraldigrrvveiaeqqkrlkpvqvtqvaavlnkvyfplqqklmlctlvlmlrnernkdismgrlhevyrrvcakrnilaldqaeftgtvdlvetrgilrimrkkeprlhkvllqwdeeevhaalsdkqliasilsdtacl >7jk4_ABCDEG:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF DROSOPHILA ORC BOUND TO AT-RICH DNA AND CDC6 organism=DROSOPHILA MELANOGASTER DNA sequence DA(H1):DT(I68) DG(H2):DC(I67) DA(H3):DT(I66) DT(H4):DA(I65) DT(H5):DA(I64) DT(H6):DA(I63) DT(H7):DA(I62) DA(H8):DT(I61) DT(H9):DA(I60) DG(H10):DC(I59) DT(H11):DA(I58) DT(H12):DA(I57) DT(H13):DA(I56) DA(H14):DT(I55) DG(H15):DC(I54) DA(H16):DT(I53) DT(H17):DA(I52) DC(H18):DG(I51) DT(H19):DA(I50) DT(H20):DA(I49) DT(H21):DA(I48) DT(H22):DA(I47) DA(H23):DT(I46) DT(H24):DA(I45) DG(H25):DC(I44) DC(H26):DG(I43) DT(H27):DA(I42) DT(H28):DA(I41) DG(H29):DC(I40) DC(H30):DG(I39) DT(H31):DA(I38) DT(H32):DA(I37) DT(H33):DA(I36) DT(H34):DA(I35) chainB chainC (602) ARG711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 9 3 0 0 0 0 0 0 0 0 chainD chainE chainA (174) ARG692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG prot.sequence tpsqkmkkiragelspsmqqrtdlpakdsskselqlareqlhvsvvpkslpcrerefeniyaflegkiqdqcggcmyvsgvpgtgktatvtgvirtlqrmakqnelpafeyleingmrlteprqayvqiykqltgktvsweqahallekrfttpaprrvttvllvdeldilcnRrqdvvynlldwptksaaklvvvtiantmdlperllmgkvtsrlgltrltfqpyshkqlqeivtarlggsetfkgeavqlvarkvaavsgdarraldicrrateiadtaavkcvtmlhvqqalaemiasakvqairncsrmeqiflqaiaaevtrtgveettfmgvyqqvetiaafmgvtfpppgralrlcsklgaerliisehsrndlfqkillnvsaddihyalrv/fvpesdgyfhsaehegsinaimeeyrsyfpkwmcilnegfnillyglgskhqllqsfhrevlhkqtvlvvngffpsltikdmldsitsdildagispanpheavdmieeefalipethlflivhnldgamlrnvkaqailsrlaripnihllasidhintpllwdqgklcsfnFswwdcttmlpytnetafensalssmrsvfsslttnsrgiymlivkyqlknkgmpfrdlysscreaflvssdlalraqltefldhklvkskrsvdgseqltipidgallqqfleeqe/mdptisvskgcfvykngatrsllgkevvqqpfyeeyrkawnqindhiadlqhrsyartleqlvdfvvgqaerevlptaalltginqpdhlsqftaltqrlhaqraamvcvlqsrdcatlkaavetlvfglvednaeverlrrsqctmkqlkswytnnfdserrqlvvilpdfecfnasvlqdlililsahcgslpfvlvlgvatamtavhgtlpyhvsskirlrvfqtqaaptglnevldkvllspkyafhlsgktfkflthiflyydfsihgfiqgfkyclmehffggnafalctdyskalgrikqlthedmetirrlpsfrpyveqickriiavltdddylkkklpqllrdcllhfllfrcslefltelvgdlprcplgklrrelyvnclnraiistpeykeclqmlsflskdefvakvnralerteqflveeiaplelgeactavlrpkleairlavdevvkagralqktlqlietqivqdhlralqdappihelfvfsdiatvrrniigapraalhtalnnphfymqckccelqdqsllvgtlpdlsvvyklhlecgrminlfdwlqafrsvvpqiqarftravaelqflgyikmskRktdhatrltw/peadrelvsirrflkerlqrdyttlrgyakersnvrlllqrtaemgesnsllllgprgsgkttlinsvladllpnksfgentlivhldgnlhtddrvalksitvqmqlenaadgkvfgsfaenlafllqclkaggkhsksvifileefdlfcahhnqtllynlfdvsqsaqapicvlgvtcrldviellekrvksrfshrqvflfpslrrfedyvdlcrdllslptgnslllaaekiynlqniyfsrnhfdpgeygfsprlrdawnkqickvlatqqarstlqalhdfdiseaylknflfrlvahlrpqsphitaekmaavgsqfegddkiellcglsvlelcliiaikhhsqiydrdsfnfeiiyarfskfakvsttmqaversivlkafehlriaelimpltvqkefemhklaltysqihhcmqryqalptevaqwaqs/meaicssleplfpcreaaietlgeligdssetypsaiylfghsgtgktaltraflkecgkrqnvrtahlnaiecyttkimleilldslapdqgdalkvdnmldfveqlrrqaatrvedqgfliavdnaerlrdmdanvlpvllrlqeltnlnlcvillsqlpfekfynktglseivclhlaqynkaetqrilgsdfqqvrnqlleqkkrleicqeavtedfynnylnlflsvfykacrdvpelqltarkclstylepvldgsrlwrhiagplrsaltqiymrieslelpyyakflliaaflashnaakqdkrlfvklgpksfsidrllaifyaileekvgltcnllsqistlvhlnllsfvsgeqnimegsarlqctiglefvlqigkvvgfnvrqyl/rnkyqnarrvlnsaetqnlpgresqlqelreffsnhlesqtsgslyvsgqpgtgktaclslllrdpdfskrlqrvyinctsiasvgavykklctelqlkvsgrterdhleaiqrhlktakrmlllvldeidqlctsrqevlytifewpalpgsrillvgiansldltdralmrlnarcelkprlmhfppyskqqiveifksrlaeaevldvfppvtlqllaakvsaisgdvrraldigrrvveiaeqqkrlkpvqvtqvaavlnkvyfplqqklmlctlvlmlrnernkdismgrlhevyrrvcakrnilaldqaeftgtvdlvetrgilrimrkkeprlhkvllqwdeeevhaalsdkqliasilsdtacl >7jk5_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF DROSOPHILA ORC BOUND TO DNA organism=DROSOPHILA MELANOGASTER DNA sequence DA(I36):DT(H33) DA(I37):DT(H32) DA(I38):DT(H31) DG(I39):DC(H30) DC(I40):DG(H29) DA(I41):DT(H28) DA(I42):DT(H27) DG(I43):DC(H26) DC(I44):DG(H25) DA(I45):DT(H24) DT(I46):DA(H23) DA(I47):DT(H22) DA(I48):DT(H21) DA(I49):DT(H20) DA(I50):DT(H19) DG(I51):DC(H18) DA(I52):DT(H17) DT(I53):DA(H16) DC(I54):DG(H15) DT(I55):DA(H14) DA(I56):DT(H13) DA(I57):DT(H12) DA(I58):DT(H11) DC(I59):DG(H10) DA(I60):DT(H9) DT(I61):DA(H8) DA(I62):DT(H7) DA(I63):DT(H6) DA(I64):DT(H5) DA(I65):DT(H4) DT(I66):DA(H3) DC(I67):DG(H2) chainA (174) ARG692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpsqkmkkiragelspsmqqrtdlpakdsskselqlareqlhvsvvpkslpcrerefeniyaflegkiqdqcggcmyvsgvpgtgktatvtgvirtlqrmakqnelpafeyleingmrlteprqayvqiykqltgktvsweqahallekrfttpaprrvttvllvdeldilcnRrqdvvynlldwptksaaklvvvtiantmdlperllrltfqpyshkqlqeivtarlggsetfkgeavqlvarkvaavsgdarraldicrrateiadtaavkcvtmlhvqqalaemiasakvqairncsrmeqiflqaiaaevtrtgveettfmgvyqqvetiaafmgvtfpppgralrlcsklgaerliisehsrndlfqkillnvsaddihyalrv >7jk5_ACDE:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF DROSOPHILA ORC BOUND TO DNA organism=DROSOPHILA MELANOGASTER DNA sequence DA(I36):DT(H33) DA(I37):DT(H32) DA(I38):DT(H31) DG(I39):DC(H30) DC(I40):DG(H29) DA(I41):DT(H28) DA(I42):DT(H27) DG(I43):DC(H26) DC(I44):DG(H25) DA(I45):DT(H24) DT(I46):DA(H23) DA(I47):DT(H22) DA(I48):DT(H21) DA(I49):DT(H20) DA(I50):DT(H19) DG(I51):DC(H18) DA(I52):DT(H17) DT(I53):DA(H16) DC(I54):DG(H15) DT(I55):DA(H14) DA(I56):DT(H13) DA(I57):DT(H12) DA(I58):DT(H11) DC(I59):DG(H10) DA(I60):DT(H9) DT(I61):DA(H8) DA(I62):DT(H7) DA(I63):DT(H6) DA(I64):DT(H5) DA(I65):DT(H4) DT(I66):DA(H3) DC(I67):DG(H2) chainC (582) ARG711 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE (306) LYS341 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (174) ARG692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpsqkmkkiragelspsmqqrtdlpakdsskselqlareqlhvsvvpkslpcrerefeniyaflegkiqdqcggcmyvsgvpgtgktatvtgvirtlqrmakqnelpafeyleingmrlteprqayvqiykqltgktvsweqahallekrfttpaprrvttvllvdeldilcnRrqdvvynlldwptksaaklvvvtiantmdlperllrltfqpyshkqlqeivtarlggsetfkgeavqlvarkvaavsgdarraldicrrateiadtaavkcvtmlhvqqalaemiasakvqairncsrmeqiflqaiaaevtrtgveettfmgvyqqvetiaafmgvtfpppgralrlcsklgaerliisehsrndlfqkillnvsaddihyalrv/skgcfvykngatrsllgkevvqqpfyeeyrkawnqindhiadlqhrsyartleqlvdfvvgqaerevlptaalltginqpdhlsqftaltqrlhaqraamvcvlqsrdcatlkaavetlvfglvednaeverlrrsqctmkqlkswytnnfdserrqlvvilpdfecfnasvlqdlililsahcgslpfvlvlgvatamtavhgtlpyhvsskirlrvfqtqaaptglnevldkvllspkyafhlsgktfkflthiflyydfsihgfiqgfkyclmehffggnafalctdyskalgrikqlthedmetirrlpsfrpyveqiiiavltdddylkkklpqllrdcllhfllfrcslefltelvgdlprcplgklrrelyvnclnraiistpeykeclqmlsflskdefvakvnralerteqflveeiaplelgeactavlrpkleairlavdevvkgralqktlqlietqivqdhlralqdappihelfvfsdiatvrrniigapraalhtalnnphfymqckccetlpdlsvvyklhlecgrminlfdwlqafrsvvpqiqarftravaelqflgyikmskRktdhatrl/peadrelvsirrflkerlqrdyttlrgyakersnvrlllqrtaemgesnsllllgprgsgkttlinsvladllpnksfgentlivhldgnlhtddrvalksitvqmqlenaadgkvfgsfaenlafllqclkaggkhsksvifileefdlfcahhnqtllynlfdvsqsaqapicvlgvtcrldviellekrvksrfshrqvflfpslrrfedyvdlcrdllslptgnslllaaekiynlqniyfsrnhfdpgeygfsprlrdawnkqickvlatqqarstlqalhdfdiseaylknflfrlvahlrpqsphitaekmaavgsqfegddkiellcglsvlelcliiaikhhsqiydrdsfnfeiiyarfskfakvsttmqaversivlkafehlriaelimpltvqkefemhklaltysqihhcmqryqalptevaqwaqs/meaicssleplfpcreaaietlgeligdssetypsaiylfghsgtgktaltraflkecgkrqnvrtahlnaiecyttkimleilldslapdqgdalkvdnmldfveqlrrqaatrvedqgfliavdnaerlrdmdanvlpvllrlqeltnlnlcvillsqlpfekfynktglseivclhlaqynkaetqrilgsdfqqvrnqlleqkkrleicqeavtedfynnylnlflsvfykacrdvpelqltarkclstylepvldgsrlwrhiagplrsaltqiymrieelpyyakflliaaflashnaaKqdkrlflgpksfsidrllaifyaileekvgltcnllsqistlvhlnllsfvsgeqnimegsarlqctiglefvlqigkvvgfnvrqy >7jl8_B: title=HUMAN PRIMPOL EXTENDING FROM THE CORRECT PRIMER BASE C OPPOSITE THE 8- OXOGUANINE LESION organism=Homo sapiens DNA sequence DG(H6):DC(G12) DT(H7):DA(G11) DG(H8):DC(G10) DG(H9):DC(G9) DT(H10):DA(G8) DA(H11):DT(G7) DG(H12):DC(G6) DG(H13):DC(G5) DC(H14):DT(G3) chainB ( 39) ARG76 0 0 0 0 0 0 0 0 7 ( 41) TYR78 0 0 0 0 0 0 0 0 1 (190) ARG288 0 0 0 0 0 0 0 0 5 prot.sequence ppsiwrlfhrqaqafnfvksckedvhvfaleckvgdgqRiYlvttyaefwfyyksrknllhcyevipenavcklyfdlefnkpanpgadgkkmvallieyvckalqelygvncsaedvlnldsstdekfsrhlifqlhdvafkdnihvgnflrkilqpaldlldlsflvvknnmgekhlfvdlgvytrnRNfrlyksskigkrvalevtednkffpiqskdvsdeyqyflsslvsnvrfsdtlriltcep >7jlg_A: title=HUMAN PRIMPOL EXTENDING FROM THE ERRONEOUS PRIMER BASE A OPPOSITE THE 8-OXOGUANINE LESION organism=Homo sapiens DNA sequence DG(D4):DC(C14) DT(D5):DA(C13) DG(D6):DC(C12) DT(D7):DA(C11) DG(D8):DC(C10) DG(D9):DC(C9) DT(D10):DA(C8) DA(D11):DT(C7) DG(D12):DC(C6) DG(D13):DC(C5) DA(D14):DT(C3) chainA ( 53) ASP73 0 0 0 0 0 0 0 0 0 0 1 ( 55) GLN75 0 0 0 0 0 0 0 0 0 0 1 ( 56) ARG76 0 0 0 0 0 0 0 0 0 0 4 ( 58) TYR78 0 0 0 0 0 0 0 0 0 0 1 (208) ARG288 0 0 0 0 0 0 0 0 0 0 3 prot.sequence mnrkweaklkqieereeppsiwrlfhrqaqafnfvksckedvhvfaleckvgDgQRiYlvttyaefwfyyksrknllhcyevipenavcklyfdlefnkpanpgadgkkmvallieyvckalqelygvncsaedvlnldsstdekfsrhlifqlhdvafkdnihvgnflrkilqpaldllpdlsflvvknnmgekhlfvdlgvytrnRnfrlyksskigkrvalevtednkffpiqskdvsdeyqyflsslvsnvrfsdtlriltcep >7jm4_G:"Winged_helix"_DNA-binding_domain; title=IRF TRANSCRIPTION FACTOR organism=Homo sapiens DNA sequence DC(C1):DG(F19) DA(C2):DT(F18) DA(C3):DT(F17) DC(C4):DG(F16) DT(C5):DA(F15) DG(C6):DC(F14) DA(C7):DT(F13) DA(C8):DT(F12) DA(C9):DT(F11) DC(C10):DG(F10) DC(C11):DG(F9) DG(C12):DC(F8) DA(C13):DT(F7) DG(C14):DC(F6) DA(C15):DT(F5) DA(C16):DT(F4) DA(C17):DT(F3) DG(C18):DC(F2) DC(C19):DG(F1) chainG ( 75) THR95 0 0 0 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG98 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) CYS99 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 0 0 0 0 ( 83) LYS103 0 0 0 0 0 0 0 0 4 11 1 0 0 0 0 0 0 0 0 prot.sequence ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelversqldisdpykvyrivp >7jm4_GH:"Winged_helix"_DNA-binding_domain; title=IRF TRANSCRIPTION FACTOR organism=Homo sapiens DNA sequence DG(F1):DC(C19) DC(F2):DG(C18) DT(F3):DA(C17) DT(F4):DA(C16) DT(F5):DA(C15) DC(F6):DG(C14) DT(F7):DA(C13) DC(F8):DG(C12) DG(F9):DC(C11) DG(F10):DC(C10) DT(F11):DA(C9) DT(F12):DA(C8) DT(F13):DA(C7) DC(F14):DG(C6) DA(F15):DT(C5) DG(F16):DC(C4) DT(F17):DA(C3) DT(F18):DA(C2) DG(F19):DC(C1) chainG ( 75) THR95 0 0 0 0 0 0 0 0 0 0 0 1 2 0 1 0 0 0 0 ( 78) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 ( 79) CYS99 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 ( 83) LYS103 0 0 0 0 0 0 0 0 1 11 4 0 0 0 0 0 0 0 0 chainH ( 39) LYS59 0 0 0 0 0 0 0 0 0 0 0 1 4 9 0 0 0 0 0 ( 78) ARG98 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 ( 79) CYS99 0 0 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS103 0 0 0 2 8 7 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelversqldisdpykvyrivp/ngklrqwlidqidsgkypglvweneeksifripwkhagKqdynreedaalfkawalfkgkfregidkpdpptwktrlRCalnKsndfeelversqldisdpykvyriv >7jn3_E:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase;N-terminal_Zn_binding_domain_of_HIV_integrase; title=CRYO-EM STRUCTURE OF ROUS SARCOMA VIRUS CLEAVED SYNAPTIC COMPLEX (CSC) WITH HIV-1 INTEGRASE STRAND TRANSFER INHIBITOR MK-2048 organism=ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) DNA sequence DA(L21):DT(K18) DT(L22):DA(K17) DT(L23):DA(K16) DG(L24):DC(K15) DC(L25):DG(K14) DA(L26):DT(K13) DT(L27):DA(K12) DA(L28):DT(K11) DA(L29):DT(K10) DG(L30):DC(K9) DA(L31):DT(K8) DC(L32):DG(K7) DA(L33):DT(K6) DA(L34):DT(K5) DC(L35):DG(K4) chainE (151) GLN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (154) ALA154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (157) GLU157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (158) ARG158 0 0 0 0 0 0 0 0 0 0 0 7 15 9 0 (161) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 (203) GLU203 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (244) ARG244 0 0 0 0 0 0 0 0 0 0 5 14 12 0 0 (246) TYR246 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 prot.sequence plreakdlhtalhigpralskacnismqqarevvqtcphcnsapaleagvnprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavlgrpkaiktdngscftskstrewlarwgiahttgipgnsQgqAmvERanRllkdkirvlaegdgfmkriptskqgellakamyalnhfergEntktpiqkhwrptvltegppvkirietgewekgwnvlvwgRgYaavknrdtdkviwvpsrkvkpdi >7jn3_EF:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase;N-terminal_Zn_binding_domain_of_HIV_integrase; title=CRYO-EM STRUCTURE OF ROUS SARCOMA VIRUS CLEAVED SYNAPTIC COMPLEX (CSC) WITH HIV-1 INTEGRASE STRAND TRANSFER INHIBITOR MK-2048 organism=ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) DNA sequence DT(K3):DA(L36) DG(K4):DC(L35) DT(K5):DA(L34) DT(K6):DA(L33) DG(K7):DC(L32) DT(K8):DA(L31) DC(K9):DG(L30) DT(K10):DA(L29) DT(K11):DA(L28) DA(K12):DT(L27) DT(K13):DA(L26) DG(K14):DC(L25) DC(K15):DG(L24) DA(K16):DT(L23) DA(K17):DT(L22) DT(K18):DA(L21) chainE ( 51) ASN51 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) TRP76 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ALA154 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) GLU157 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) ARG158 0 0 9 15 7 0 0 0 0 0 0 0 0 0 0 0 (161) ARG161 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 (203) GLU203 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (244) ARG244 0 0 0 12 14 5 0 0 0 0 0 0 0 0 0 0 (246) TYR246 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF prot.sequence plreakdlhtalhigpralskacnismqqarevvqtcphcnsapaleagvNprglgplqiwqtdftleprmaprsWlavtvdtassaivvtqhgrvtsvavqhhwataiavlgrpkaiktdngscftskstrewlarwgiahttgipgnsQgqAmvERanRllkdkirvlaegdgfmkriptskqgellakamyalnhfergEntktpiqkhwrptvltegppvkirietgewekgwnvlvwgRgYaavknrdtdkviwvpsrkvkpdi/gplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwAtaiavlgrpkaiktdngscftsksTrewlarwgiahttgipgnsqgqamveranrllkdkirvlaegdgfmkriptskqgellakamyalnhfergentKtpIqkHWrpTvltegppvkirietgewekgwnvlvwgrgyaavknrdtdkvIwvpsrkvkpdi >7jnp_A:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=MTRR BOUND TO THE RPOH OPERATOR FROM NEISSERIA GONORRHOEAE organism=NEISSERIA GONORRHOEAE DNA sequence DT(C1):DA(D21) DT(C2):DA(D20) DA(C3):DT(D19) DC(C4):DG(D18) DA(C5):DT(D17) DT(C6):DA(D16) DA(C7):DT(D15) DC(C8):DG(D14) DA(C9):DT(D13) DA(C10):DT(D12) DC(C11):DG(D11) DC(C12):DG(D10) DA(C13):DT(D9) DC(C14):DG(D8) DG(C15):DC(D7) DT(C16):DA(D6) DA(C17):DT(D5) DT(C18):DA(D4) DG(C19):DC(D3) DT(C20):DA(D2) DA(C21):DT(D1) chainA ( 36) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 ( 37) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 10 13 4 0 0 0 0 0 ( 41) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 ( 42) TRP49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 0 prot.sequence alktkehlmlaaletfyrkgiartslneiaqaagvTRgalYWhfknkedlfdalfqricddienciaqdaadaeggswtvfrhtllhfferlqsndihykfhnilflkcehteqnaaviaiarkhqaiwrekitavlteavenqdladdldketavifikstldgliwrwfssgesfdlgktapriigimmdnlenhpclrr >7jnp_AB:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=MTRR BOUND TO THE RPOH OPERATOR FROM NEISSERIA GONORRHOEAE organism=NEISSERIA GONORRHOEAE DNA sequence DT(D1):DA(C21) DA(D2):DT(C20) DC(D3):DG(C19) DA(D4):DT(C18) DT(D5):DA(C17) DA(D6):DT(C16) DC(D7):DG(C15) DG(D8):DC(C14) DT(D9):DA(C13) DG(D10):DC(C12) DG(D11):DC(C11) DT(D12):DA(C10) DT(D13):DA(C9) DG(D14):DC(C8) DT(D15):DA(C7) DA(D16):DT(C6) DT(D17):DA(C5) DG(D18):DC(C4) DT(D19):DA(C3) DA(D20):DT(C2) DA(D21):DT(C1) chainA ( 36) THR43 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG44 0 0 0 0 0 4 13 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR48 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TRP49 0 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 35) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 ( 36) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 13 12 3 0 0 0 0 0 0 ( 40) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 ( 41) TRP49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 prot.sequence alktkehlmlaaletfyrkgiartslneiaqaagvTRgalYWhfknkedlfdalfqricddienciaqdaadaeggswtvfrhtllhfferlqsndihykfhnilflkcehteqnaaviaiarkhqaiwrekitavlteavenqdladdldketavifikstldgliwrwfssgesfdlgktapriigimmdnlenhpclrr/lktkehlmlaaletfyrkgiartslneiaqaagvTRgalYWhfknkedlfdalfqricddienciaqdaadaeggswtvfrhtllhfferlqsndihykfhnilflkcehteqnaaviaiarkhqaiwrekitavlteavenqdladdldketavifikstldgliwrwfssgesfdlgktapriigimmdnlenhpclrr >7jo9_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=1:1 CGAS-NUCLEOSOME COMPLEX organism=HOMO SAPIENS DNA sequence DT(J-72):DA(I72) DC(J-71):DG(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlrDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/rSrkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/hrKvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/rSrkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >7joa_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=2:1 CGAS-NUCLEOSOME COMPLEX organism=HOMO SAPIENS DNA sequence DT(J-72):DA(I72) DC(J-71):DG(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlrDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/hrKvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >7joa_H:Histone-fold; title=2:1 CGAS-NUCLEOSOME COMPLEX organism=? DNA sequence DT(I-72):DA(J72) DC(I-71):DG(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >7jps_ABCD:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain;ARM_repeat; title=ORC-DNA: HUMAN ORIGIN RECOGNITION COMPLEX (ORC) WITH DNA BOUND IN THE CORE organism=HOMO SAPIENS DNA sequence DA(F1):DT(G13) DT(F2):DA(G12) DA(F3):DT(G11) DT(F4):DA(G10) DA(F5):DT(G9) DT(F6):DA(G8) DA(F7):DT(G7) DT(F8):DA(G6) DA(F9):DT(G5) DT(F10):DA(G4) DA(F11):DT(G3) DA(F12):DT(G2) DT(F13):DA(G1) chainA chainB ( 98) THR365 0 1 0 0 0 0 0 0 0 0 0 0 0 (100) ARG367 0 1 0 3 7 0 0 0 0 0 0 0 0 chainC chainD prot.sequence svleearlrlhvsavpeslpcreqefqdiynfvesklldhtggcmyisgvpgtgktatvhevirclqqaaqandvppfqyievngmkltephqvyvqilqkltgqkatanhaaellakqfttvllvdeldllwthkqdimynlfdwpthkearlvvlaiantmdlperimtrmcfqpytysqlqqilrsrlkhlkafeddaiqlvarkvaalsgdarrcldicrrateicefsqglvtiahsmeavdemfsssyitaiknssvleqsflrailaefrrsgleeatfqqiysqhvalcrmeglpyptmsetmavcshlgscrlllvepsrndlllrvrlnvsqddvlyalkd/dqqtlrnllskvspsfsaelkqlnqqyeklfhkwmlqlhlgfnivlyglgskrdllerfrttmlqdsihvvingffpgisvksvlnsiteevldhmgTfRsildqldwivnkfkedsslelfllihnldsqmlrgeksqqiigqlsslhniyliasidhlnaplmwdhakqslfnwlwyetttyspyteetsyensllv/tssmskgcfvfkpnskkrkislpiedyfnkgknepedsklrfetyqliwqqmksenerlqeelknlfdnlieflqkshsgfqknklreiptaalvlgVnVtdhdltfgsltealqnnvtpyvvslqakdcpdmkhflqklisqlmdcthysmdslsswymtvtqsppvvvilkdmesfatkvlqdfiiissqhlhefplilifgiatspiiihrllphavssllcielfqckehlttvldklllttqfpfkinekvlqvltniflyhdfsvqnfikglqlsllehfysqplsvlccnlpeakrrinflsnnqcenirrlpsfrryvekqasekqvalltnerylkeetqlllenlhvyhmnyflvlrclhkftsslpkyplgrqirelyctclekniwdseeyasvlqllrmlakdelmtilekcfkvfksycenhlgstakrieeflaqfkfevlrenvvnfidclvreyllppetqplhevvyfsaahalrehlnaaprialhtalnnpyyylknealksniapdiciayklhlinlvdwseafatvvtaaemneiiharfiravselellgfikptkqktdhvarltw/lsqvqrilrerfcrqsphsnlfgvqvqykhlsellkrtalhgesnsvligprgsgktmlinhalkelmeieevsenvlqvhlngllqindkialkeiTrQlnlenvvgdkvfgsfaenlsflleacpvifildefdlfahhknqtllynlfdisqsaqtpiavigltcrldilellekrvksrfshrqihlmnsfgfpqyvkifkeqlslpaefpdkvfaekwnenvqylsedrsvqevlqkhfnisknlrslhmllmlalnrvtashpfmtavdlmeasqlcsmdskanivhglsvleicliiamkhlndiyeeepfnfqmvynefqkfvqrkahsvynfekpvvmkafehlqqlelikpmertsgnsqreyqlmkllldntqimnalqkypncptdvrqwats >7jps_B: title=ORC-DNA: HUMAN ORIGIN RECOGNITION COMPLEX (ORC) WITH DNA BOUND IN THE CORE organism=HOMO SAPIENS DNA sequence DA(G1):DT(F13) DT(G2):DA(F12) DT(G3):DA(F11) DA(G4):DT(F10) DT(G5):DA(F9) DA(G6):DT(F8) DT(G7):DA(F7) DA(G8):DT(F6) DT(G9):DA(F5) DA(G10):DT(F4) DT(G11):DA(F3) DA(G12):DT(F2) DT(G13):DA(F1) chainB ( 98) THR365 0 0 0 0 0 0 0 0 0 0 0 1 0 (100) ARG367 0 0 0 0 0 0 0 0 7 3 0 1 0 prot.sequence dqqtlrnllskvspsfsaelkqlnqqyeklfhkwmlqlhlgfnivlyglgskrdllerfrttmlqdsihvvingffpgisvksvlnsiteevldhmgTfRsildqldwivnkfkedsslelfllihnldsqmlrgeksqqiigqlsslhniyliasidhlnaplmwdhakqslfnwlwyetttyspyteetsyensllv >7jqq_ABCDE:P-loop_containing_nucleoside_triphosphate_hydrolases; title=THE BACTERIOPHAGE PHI-29 VIRAL GENOME PACKAGING MOTOR ASSEMBLY organism=BACILLUS PHAGE PHI29 DNA sequence DG(F1):DC(G60) DT(F2):DA(G59) DC(F3):DG(G58) DA(F4):DT(G57) DG(F5):DC(G56) DT(F6):DA(G55) DC(F7):DG(G54) DA(F8):DT(G53) DG(F9):DC(G52) DT(F10):DA(G51) DC(F11):DG(G50) DA(F12):DT(G49) DG(F13):DC(G48) DT(F14):DA(G47) DC(F15):DG(G46) DA(F16):DT(G45) DG(F17):DC(G44) DT(F18):DA(G43) DC(F19):DG(G42) DA(F20):DT(G41) DG(F21):DC(G40) DT(F22):DA(G39) DC(F23):DG(G38) DA(F24):DT(G37) DG(F25):DC(G36) DT(F26):DA(G35) DC(F27):DG(G34) DA(F28):DT(G33) DG(F29):DC(G32) DT(F30):DA(G31) DC(F31):DG(G30) DA(F32):DT(G29) DG(F33):DC(G28) DT(F34):DA(G27) DC(F35):DG(G26) DA(F36):DT(G25) DG(F37):DC(G24) DT(F38):DA(G23) DC(F39):DG(G22) DA(F40):DT(G21) DG(F41):DC(G20) DT(F42):DA(G19) DC(F43):DG(G18) DA(F44):DT(G17) DG(F45):DC(G16) DT(F46):DA(G15) DC(F47):DG(G14) DA(F48):DT(G13) DG(F49):DC(G12) DT(F50):DA(G11) DC(F51):DG(G10) DA(F52):DT(G9) DG(F53):DC(G8) DT(F54):DA(G7) DC(F55):DG(G6) DA(F56):DT(G5) DG(F57):DC(G4) DT(F58):DA(G3) DC(F59):DG(G2) DA(F60):DT(G1) chainA ( 53) LYS56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 56) LEU59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (123) ASN126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ASN128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 52) TYR55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (290) TYR293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ARG330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (327) ARG330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence slfynpqkmlsydrilnfvigargigksyamkvypinrfikygeqfiyvrryKpelakvsnyfndvaqefpdhelvvkgrrfyidgklagwaiplsvwqseksnaypnvstivfdefirekdnsnyipnevsallnlmdtvfrnrervrciclsnavsvvnpyflffnlvpdvnkrfnvyddalieipdsldfsserrktrfgrlidgteygemsldnqfigdsqvfiekrskdskfvfsivyngftlgvwvdvnqglmyidtahdpstknvytlttddlnenmmlitnyknnyhlrklasafmngylrfdnqvirniayelfrkmr/slfynpqkmlsydrilnfvigargigksyamkvypinrfikygeqfiyvrrykpeLakvsnyfndvaqefpdhelvvkgrrfyidgklagwaiplsvwqseksnaypnvstivfdefirekdNsNyipnevsallnlmdtvfrnrervrciclsnavsvvnpyflffnlvpdvnkrfnvyddalieipdsldfsserrktrfgrlidgteygemsldnqfigdsqvfiekrskdskfvfsivyngftlgvwvdvnqglmyidtahdpstknvytlttddlnenmmlitnyknnyhlrklasafmngylrfdnqvirniayelfrkmr/slfynpqkmlsydrilnfvigargigksyamkvypinrfikygeqfiyvrrYkpelakvsnyfndvaqefpdhelvvkgrrfyidgklagwaiplsvwqseksnaypnvstivfdefirekdnsnyipnevsallnlmdtvfrnrervrciclsnavsvvnpyflffnlvpdvnkrfnvyddalieipdsldfsserrktrfgrlidgteygemsldnqfigdsqvfiekrskdskfvfsivyngftlgvwvdvnqglmyidtahdpstknvytlttddlnenmmlitnyknnyhlrklasafmngylrfdnqvirniayelfrkmr/slfynpqkmlsydrilnfvigargigksyamkvypinrfikygeqfiyvrrykpelakvsnyfndvaqefpdhelvvkgrrfyidgklagwaiplsvwqseksnaypnvstivfdefirekdnsnyipnevsallnlmdtvfrnrervrciclsnavsvvnpyflffnlvpdvnkrfnvyddalieipdsldfsserrktrfgrlidgteygemsldnqfigdsqvfiekrskdskfvfsivyngftlgvwvdvnqglmyidtahdpstknvytlttddlnenmmlitnYknnyhlrklasafmngylrfdnqvirniayelfrkmR/slfynpqkmlsydrilnfvigargigksyamkvypinrfikygeqfiyvrrykpelakvsnyfndvaqefpdhelvvkgrrfyidgklagwaiplsvwqseksnaypnvstivfdefirekdnsnyipnevsallnlmdtvfrnrervrciclsnavsvvnpyflffnlvpdvnkrfnvyddalieipdsldfsserrktrfgrlidgteygemsldnqfigdsqvfiekrskdskfvfsivyngftlgvwvdvnqglmyidtahdpstknvytlttddlnenmmlitnyknnyhlrklasafmngylrfdnqvirniayelfrkmR >7jqq_D:P-loop_containing_nucleoside_triphosphate_hydrolases; title=THE BACTERIOPHAGE PHI-29 VIRAL GENOME PACKAGING MOTOR ASSEMBLY organism=BACILLUS PHAGE PHI29 DNA sequence DT(G1):DA(F60) DG(G2):DC(F59) DA(G3):DT(F58) DC(G4):DG(F57) DT(G5):DA(F56) DG(G6):DC(F55) DA(G7):DT(F54) DC(G8):DG(F53) DT(G9):DA(F52) DG(G10):DC(F51) DA(G11):DT(F50) DC(G12):DG(F49) DT(G13):DA(F48) DG(G14):DC(F47) DA(G15):DT(F46) DC(G16):DG(F45) DT(G17):DA(F44) DG(G18):DC(F43) DA(G19):DT(F42) DC(G20):DG(F41) DT(G21):DA(F40) DG(G22):DC(F39) DA(G23):DT(F38) DC(G24):DG(F37) DT(G25):DA(F36) DG(G26):DC(F35) DA(G27):DT(F34) DC(G28):DG(F33) DT(G29):DA(F32) DG(G30):DC(F31) DA(G31):DT(F30) DC(G32):DG(F29) DT(G33):DA(F28) DG(G34):DC(F27) DA(G35):DT(F26) DC(G36):DG(F25) DT(G37):DA(F24) DG(G38):DC(F23) DA(G39):DT(F22) DC(G40):DG(F21) DT(G41):DA(F20) DG(G42):DC(F19) DA(G43):DT(F18) DC(G44):DG(F17) DT(G45):DA(F16) DG(G46):DC(F15) DA(G47):DT(F14) DC(G48):DG(F13) DT(G49):DA(F12) DG(G50):DC(F11) DA(G51):DT(F10) DC(G52):DG(F9) DT(G53):DA(F8) DG(G54):DC(F7) DA(G55):DT(F6) DC(G56):DG(F5) DT(G57):DA(F4) DG(G58):DC(F3) DA(G59):DT(F2) DC(G60):DG(F1) chainD (290) TYR293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ARG330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence slfynpqkmlsydrilnfvigargigksyamkvypinrfikygeqfiyvrrykpelakvsnyfndvaqefpdhelvvkgrrfyidgklagwaiplsvwqseksnaypnvstivfdefirekdnsnyipnevsallnlmdtvfrnrervrciclsnavsvvnpyflffnlvpdvnkrfnvyddalieipdsldfsserrktrfgrlidgteygemsldnqfigdsqvfiekrskdskfvfsivyngftlgvwvdvnqglmyidtahdpstknvytlttddlnenmmlitnYknnyhlrklasafmngylrfdnqvirniayelfrkmR >7jsa_J:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF HUMAN TRANSCRIPTION FACTOR ERF IN THE REDUCED FORM, IN COMPLEX WITH DOUBLE-STRANDED DNA ACCGGAAGTG organism=Homo sapiens DNA sequence DC(C14):DG(B11) DA(C15):DT(B10) DC(C16):DG(B9) DT(C17):DA(B8) DT(C18):DA(B7) DC(C19):DG(B6) DC(C20):DG(B5) DG(C21):DC(B4) DG(C22):DC(B3) DT(C23):DA(B2) chainJ ( 58) ASP79 0 0 0 0 0 0 5 0 0 0 ( 59) LYS80 0 0 0 0 3 0 0 0 0 0 ( 62) ARG83 0 0 0 0 8 15 22 0 0 0 ( 65) ARG86 0 0 0 0 0 0 9 9 0 0 ( 66) TYR87 0 0 2 6 6 0 0 0 0 0 prot.sequence pgsrqiqlwhfilellrkeeyqgviawqgdygefvikdpdevarlwgvrkckpqmnyDKlsRalRYyynkrilhktkgkrftykfnfn >7jsl_L:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF HUMAN TRANSCRIPTION FACTOR ERF IN THE OXIDIZED FORM, IN COMPLEX WITH DOUBLE-STRANDED DNA ACCGGAAGTG organism=Homo sapiens DNA sequence DC(K14):DG(I11) DA(K15):DT(I10) DC(K16):DG(I9) DT(K17):DA(I8) DT(K18):DA(I7) DC(K19):DG(I6) DC(K20):DG(I5) DG(K21):DC(I4) DG(K22):DC(I3) DT(K23):DA(I2) chainL ( 52) ASP79 0 0 0 0 0 1 5 0 0 0 ( 53) LYS80 0 0 0 0 2 0 0 0 0 0 ( 56) ARG83 0 0 0 0 7 14 20 0 0 0 ( 59) ARG86 0 0 0 0 0 0 9 11 1 0 ( 60) TYR87 0 0 3 6 6 1 0 0 0 0 prot.sequence qlwhfilellrkeeyqgviawqgdygefvikdpdevarlwgvrkckpqmnyDKlsRalRYyynkrilhktkgkrftykfnfn >7jtn_A:Trypsin-like_serine_proteases;vWA-like;Complement_control_module/SCR_domain; title=HUMAN COMPLEMENT FACTOR B INHIBITED BY A SLOW OFF-RATE MODIFIED APTAMER OF 29 BASES organism=HOMO SAPIENS DNA sequence DA(B5) DG(B6):DC(B25) DA(B22) DG(B20) DA(B19) DA(B16) DG(B14) DA(B7):DA(B13) DA(B8):DA(B12) DA(B10):DG(B24) DG(B11) chainA ( 38) VAL46 0 0 10 0 0 0 0 0 0 0 0 ( 39) GLN47 0 0 3 0 0 0 0 0 0 0 0 ( 40) THR48 0 0 5 0 0 0 0 0 0 0 0 ( 44) ARG52 0 0 0 0 0 0 0 0 0 0 1 (185) SER196 0 0 6 0 0 0 0 0 0 0 0 prot.sequence qgscslegveikggsfrllqegqaleyvcpsgfypypVQTrtcRstgswstlktktvrkaecraihcprphdfengeywprspyynvsdeisfhcydgytlrgsanrtcqvngrwsgqtaicdngagycsnpgipigtrkvgsqyrledsvtyhcsrgltlrgsqrrtcqeggswsgtepscqdSfmydtpqevaeaflssltetikrkivldpsgsmniylvldgsdsigasnftgakkclvnliekvasygvkpryglvtyatypkiwvkvseadssnadwvtkqlneinyegtntkkalqavysmmswpddvppegwnrtrhviilmtdglhnmggdpitvideirdllyigkdrknpredyldvyvfgvgplvnqvninalaskkdneqhvfkvkdmenledvfyqmidesqslslcgmvwehrkgtdyhkqpwqakisvirpskghescmgavvseyfvltaahcftvddkehsikvsvggekrdleievvlfhpnyningkkeagipefydydvaliklknklkygqtirpiclpctegttralrlpptttcqqqkeellpaqdikalfvseeekkltrkevyikngdkkgscerdaqyapgydkvkdisevvtprflctggvspyadpntcrgdsggplivhkrsrfiqvgviswgvvdvcknqvpahardfhinlfqvlpwlkeklqdedlgfl >7jtq_C:Trypsin-like_serine_proteases;vWA-like;Complement_control_module/SCR_domain; title=HUMAN COMPLEMENT FACTOR B INHIBITED BY A SLOW OFF-RATE MODIFIED APTAMER OF 31 BASES organism=? DNA sequence DA(D6) DG(D7) DA(D8) DA(D9) DA(D11) DG(D12) DA(D13) DA(D14) DG(D15) DA(D17) DA(D20) DG(D21) DA(D23) DG(D25) DC(D26) chainC ( 38) VAL46 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 ( 39) GLN47 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 40) THR48 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 ( 44) ARG52 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (185) SER196 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 prot.sequence qgscslegveikggsfrllqegqaleyvcpsgfypypVQTrtcRstgswstlktktvrkaecraihcprphdfengeywprspyynvsdeisfhcydgytlrgsanrtcqvngrwsgqtaicdngagycsnpgipigtrkvgsqyrledsvtyhcsrgltlrgsqrrtcqeggswsgtepscqdSfmydtpqevaeaflssltetikrkivldpsgsmniylvldgsdsigasnftgakkclvnliekvasygvkpryglvtyatypkiwvkvseadssnadwvtkqlneinyegtntkkalqavysmmswpddvppegwnrtrhviilmtdglhnmggdpitvideirdllyigkdrknpredyldvyvfgvgplvnqvninalaskkdneqhvfkvkdmenledvfyqmidesqslslcgmvwehrkgtdyhkqpwqakisvirpskghescmgavvseyfvltaahcftvddkehsikvsvggekrdleievvlfhpnyningkkeagipefydydvaliklknklkygqtirpiclpctegttralrlpptttcqqqkeellpaqdikalfvseeekkltrkevyikngdkkgscerdaqyapgydkvkdisevvtprflctggvspyadpntcrgdsggplivhkrsrfiqvgviswgvvdvcknkqvpahardfhinlfqvlpwlkeklqdedlgfl >7ju3_A:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=MTRR BOUND TO THE MTRCDE OPERATOR FROM NEISSERIA GONORRHOEAE organism=? DNA sequence DT(C1):DA(D21) DA(C2):DT(D20) DT(C3):DA(D19) DC(C4):DG(D18) DC(C5):DG(D17) DG(C6):DC(D16) DT(C7):DA(D15) DG(C8):DC(D14) DC(C9):DG(D13) DA(C10):DT(D12) DA(C11):DT(D11) DT(C12):DA(D10) DC(C13):DG(D9) DG(C14):DC(D8) DT(C15):DA(D7) DG(C16):DC(D6) DT(C17):DA(D5) DA(C18):DT(D4) DT(C19):DA(D3) DG(C20):DC(D2) DT(C21):DA(D1) chainA ( 36) THR43 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG44 0 0 0 0 0 0 0 6 14 15 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR48 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TRP49 0 0 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alktkehlmlaaletfyrkgiartslneiaqaagvTRgalYWhfknkedlfdalfqricddienciaqdaadaeggswtvfrhtllhfferlqsndihykfhnilflkcehteqnaaviaiarkhqaiwrekitavlteavenqdladdldketavifikstldgliwrwfssgesfdlgktapriigimmdnlenhpclrr >7ju3_AB:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=MTRR BOUND TO THE MTRCDE OPERATOR FROM NEISSERIA GONORRHOEAE organism=NEISSERIA GONORRHOEAE DNA sequence DA(D1):DT(C21) DC(D2):DG(C20) DA(D3):DT(C19) DT(D4):DA(C18) DA(D5):DT(C17) DC(D6):DG(C16) DA(D7):DT(C15) DC(D8):DG(C14) DG(D9):DC(C13) DA(D10):DT(C12) DT(D11):DA(C11) DT(D12):DA(C10) DG(D13):DC(C9) DC(D14):DG(C8) DA(D15):DT(C7) DC(D16):DG(C6) DG(D17):DC(C5) DG(D18):DC(C4) DA(D19):DT(C3) DT(D20):DA(C2) DA(D21):DT(C1) chainA ( 36) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 37) ARG44 0 0 0 0 0 0 0 0 0 0 0 15 14 6 0 0 0 0 0 0 0 ( 41) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 42) TRP49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 0 0 0 chainB ( 37) THR43 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG44 0 0 0 0 1 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR48 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TRP49 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alktkehlmlaaletfyrkgiartslneiaqaagvTRgalYWhfknkedlfdalfqricddienciaqdaadaeggswtvfrhtllhfferlqsndihykfhnilflkcehteqnaaviaiarkhqaiwrekitavlteavenqdladdldketavifikstldgliwrwfssgesfdlgktapriigimmdnlenhpclrr/ealktkehlmlaaletfyrkgiartslneiaqaagvTRgalYWhfknkedlfdalfqricddienciaqdaadaeggswtvfrhtllhfferlqsndihykfhnilflkcehteqnaaviaiarkhqaiwrekitavlteavenqdladdldketavifikstldgliwrwfssgesfdlgktapriigimmdnlenhpclrr >7jvt_CD:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF A LAMBDA-186 HYBRID REPRESSOR organism=? DNA sequence DA(E2):DT(F40) DT(E3):DA(F39) DA(E4):DT(F38) DC(E5):DG(F37) DC(E6):DG(F36) DA(E7):DT(F35) DC(E8):DG(F34) DT(E9):DA(F33) DG(E10):DC(F32) DG(E11):DC(F31) DC(E12):DG(F30) DG(E13):DC(F29) DG(E14):DC(F28) DT(E15):DA(F27) DG(E16):DC(F26) DA(E17):DT(F25) DT(E18):DA(F24) DA(E19):DT(F23) DT(E20):DA(F22) chainC ( 41) GLN44 0 23 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER45 0 0 0 5 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ASN55 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) LYS3 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 31) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 32) GLU34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 42) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 18 0 ( 43) SER45 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 2 0 0 0 ( 52) ILE54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 53) ASN55 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 prot.sequence kkpltqeqledarrlkaiyekkknelglsqesvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavsdakriegftlseeilksdkqlsvdaqfftkpltdgmairsegkiyfvdkqaslsdglwlvdiegaisireltklpgrklhvaggkvpfecgiddiktlgrvvgvysevn/KkkpltqeqledarrlkaiyekkknelglsQEsvadkmgmgQSgvgalfngINalnaynaallakilkvsveefspsiareiyemyeavsdakriegftlseeilksdkqlsvdaqfftkpltdgmairsegkiyfvdkqaslsdglwlvdiegaisireltklpgrklhvaggkvpfecgiddiktlgrvvgvysevn >7jvt_D:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF A LAMBDA-186 HYBRID REPRESSOR organism=? DNA sequence DA(F22):DT(E20) DT(F23):DA(E19) DA(F24):DT(E18) DT(F25):DA(E17) DC(F26):DG(E16) DA(F27):DT(E15) DC(F28):DG(E14) DC(F29):DG(E13) DG(F30):DC(E12) DC(F31):DG(E11) DC(F32):DG(E10) DA(F33):DT(E9) DG(F34):DC(E8) DT(F35):DA(E7) DG(F36):DC(E6) DG(F37):DC(E5) DT(F38):DA(E4) DA(F39):DT(E3) DT(F40):DA(E2) chainD ( 1) LYS3 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 31) GLN33 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) GLU34 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN44 0 18 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) SER45 0 0 0 2 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ILE54 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ASN55 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KkkpltqeqledarrlkaiyekkknelglsQEsvadkmgmgQSgvgalfngINalnaynaallakilkvsveefspsiareiyemyeavsdakriegftlseeilksdkqlsvdaqfftkpltdgmairsegkiyfvdkqaslsdglwlvdiegaisireltklpgrklhvaggkvpfecgiddiktlgrvvgvysevn >7jy7_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;RecA_protein,_C-terminal_domain; title=STRUCTURE OF A 12 BASE PAIR RECA-D LOOP COMPLEX organism=Escherichia coli DNA sequence DT(S1):DG(T42) DT(S2):DC(T41) DT(S3):DT(T40) DT(S4):DC(T39) DT(S5):DA(T38) DT(S6):DG(T37) DT(S7):DT(T36) DT(S8):DC(T35) DT(S9):DG(T34) DT(S10):DG(T33) DT(S11):DA(T32) DT(S12):DT(T31) DC(S13):DG(T30) DG(S14):DC(T29) DT(S15):DA(T28) DC(S16):DG(T27) DG(S17):DC(T26) DC(S18):DG(T25) DC(S19):DG(T24) DC(S20):DG(T23) DA(S21):DT(T22) DC(S22):DG(T21) DG(S23):DC(T20) DC(S24):DG(T19) DT(S25):DT(T18) DT(S26):DA(T17) DT(S27):DA(T16) chainA (164) MET164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 (169) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 (198) LYS198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (199) ILE199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 chainB (162) SER162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (164) MET164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 0 0 0 0 0 (169) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 (199) ILE199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 15 0 0 prot.sequence aidenkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshMglaaRmmsqamrklagnlkqsntllifinqirmKIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpns/aidenkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdShMglaaRmmsqamrklagnlkqsntllifinqirmkIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpns >7jy7_B:P-loop_containing_nucleoside_triphosphate_hydrolases;RecA_protein,_C-terminal_domain; title=STRUCTURE OF A 12 BASE PAIR RECA-D LOOP COMPLEX organism=Escherichia coli DNA sequence DA(T16):DT(S27) DA(T17):DT(S26) DT(T18):DT(S25) DG(T19):DC(S24) DC(T20):DG(S23) DG(T21):DC(S22) DT(T22):DA(S21) DG(T23):DC(S20) DG(T24):DC(S19) DG(T25):DC(S18) DC(T26):DG(S17) DG(T27):DC(S16) DA(T28):DT(S15) DC(T29):DG(S14) DG(T30):DC(S13) DT(T31):DT(S12) DA(T32):DT(S11) DG(T33):DT(S10) DG(T34):DT(S9) DC(T35):DT(S8) DT(T36):DT(S7) DG(T37):DT(S6) DA(T38):DT(S5) DC(T39):DT(S4) DT(T40):DT(S3) DC(T41):DT(S2) DG(T42):DT(S1) chainB (162) SER162 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) MET164 0 0 0 0 0 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ARG169 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ILE199 0 0 15 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aidenkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdShMglaaRmmsqamrklagnlkqsntllifinqirmkIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpns >7jy8_GHI:P-loop_containing_nucleoside_triphosphate_hydrolases;RecA_protein,_C-terminal_domain; title=ANALYSIS OF A STRAND EXCHANGE REACTION WITH A MINI FILAMENT OF 9- RECA, 27-MER SSDNA, PARTIALLY-HOMOLOGOUS 67 BP DSDNA AND ATPGAMMAS organism=Escherichia coli DNA sequence DT(S1) DT(S2) DT(S3) DT(S4) DT(S5) DT(S6) DT(S7) DT(S8) DT(S9) DT(S10) DT(S11) DT(S12) DT(S13) DT(S14) DT(S15) DT(S16) DT(S17) DT(S18) DT(S19) DT(S20) DT(S21) DT(S22) DT(S23) DT(S24) DT(S25) DT(S26) DT(S27) chainG (169) ARG169 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) MET197 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) LYS198 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ILE199 0 0 0 0 0 0 0 0 14 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (169) ARG169 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) LYS198 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ILE199 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (165) LYS198 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE199 0 0 10 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aidenkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshmglaaRmmsqamrklagnlkqsntllifinqirMKIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpns/aidenkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshmglaaRmmsqamrklagnlkqsntllifinqirmKIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpns/smdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshmglaarmmsqamrklagnlkqsntllifinqirmKIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpns >7jy8_I:P-loop_containing_nucleoside_triphosphate_hydrolases;RecA_protein,_C-terminal_domain; title=ANALYSIS OF A STRAND EXCHANGE REACTION WITH A MINI FILAMENT OF 9- RECA, 27-MER SSDNA, PARTIALLY-HOMOLOGOUS 67 BP DSDNA AND ATPGAMMAS organism=Escherichia coli DNA sequence DT(S1) DT(S2) DT(S3) DT(S4) DT(S5) DT(S6) DT(S7) DT(S8) DT(S9) DT(S10) DT(S11) DT(S12) DT(S13) DT(S14) DT(S15) DT(S16) DT(S17) DT(S18) DT(S19) DT(S20) DT(S21) DT(S22) DT(S23) DT(S24) DT(S25) DT(S26) DT(S27) chainI (165) LYS198 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE199 0 0 10 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshmglaarmmsqamrklagnlkqsntllifinqirmKIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpns >7jy9_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;RecA_protein,_C-terminal_domain; title=STRUCTURE OF A 9 BASE PAIR RECA-D LOOP COMPLEX organism=Escherichia coli DNA sequence DC(S1):DA(T42) DC(S2):DC(T41) DC(S3):DA(T40) DC(S4):DG(T39) DC(S5):DC(T38) DC(S6):DT(T37) DC(S7):DC(T36) DC(S8):DA(T35) DC(S9):DG(T34) DC(S10):DT(T33) DC(S11):DC(T32) DC(S12):DG(T31) DC(S13):DG(T30) DC(S14):DA(T29) DA(S15):DT(T28) DA(S16):DT(T27) DA(S17):DT(T26) DA(S18):DT(T25) DA(S19):DT(T24) DA(S20):DT(T23) DA(S21):DT(T22) DA(S22):DT(T21) DA(S23):DT(T20) DA(S24):DT(T19) DA(S25):DT(T18) DC(S26):DA(T17) DC(S27):DA(T16) chainA (162) SER162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (164) MET164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 15 0 0 (169) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 0 (199) ILE199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 chainB (162) SER162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (164) MET164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 13 0 0 0 0 0 (169) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 15 0 0 0 0 0 0 (198) LYS198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (199) ILE199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 17 0 0 prot.sequence aidenkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdShMglaaRmmsqamrklagnlkqsntllifinqirmkIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpns/aidenkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdShMglaaRmmsqamrklagnlkqsntllifinqirmKIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpns >7jy9_HI:P-loop_containing_nucleoside_triphosphate_hydrolases;RecA_protein,_C-terminal_domain; title=STRUCTURE OF A 9 BASE PAIR RECA-D LOOP COMPLEX organism=Escherichia coli DNA sequence DC(S1) DC(S2) DC(S3) DC(S4) DC(S5) DC(S6) DC(S7) DC(S8) DC(S9) DC(S10) DC(S11) DC(S12) DC(S13) DC(S14) DA(S15) DA(S16) DA(S17) DA(S18) DA(S19) DA(S20) DA(S21) DA(S22) DA(S23) DA(S24) DA(S25) DC(S26) DC(S27) chainH (169) ARG169 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ILE199 0 0 0 0 0 10 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (166) ILE199 0 0 14 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aidenkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshmglaaRmmsqamrklagnlkqsntllifinqirmkIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpns/smdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshmglaarmmsqamrklagnlkqsntllifinqirmkIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpns >7jy9_I:P-loop_containing_nucleoside_triphosphate_hydrolases;RecA_protein,_C-terminal_domain; title=STRUCTURE OF A 9 BASE PAIR RECA-D LOOP COMPLEX organism=Escherichia coli DNA sequence DC(S1) DC(S2) DC(S3) DC(S4) DC(S5) DC(S6) DC(S7) DC(S8) DC(S9) DC(S10) DC(S11) DC(S12) DC(S13) DC(S14) DA(S15) DA(S16) DA(S17) DA(S18) DA(S19) DA(S20) DA(S21) DA(S22) DA(S23) DA(S24) DA(S25) DC(S26) DC(S27) chainI (166) ILE199 0 0 14 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshmglaarmmsqamrklagnlkqsntllifinqirmkIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrelllsnpns >7jzv_N:Histone-fold; title=CRYO-EM STRUCTURE OF THE BRCA1-UBCH5C/BARD1 E3-E2 MODULE BOUND TO A NUCLEOSOME organism=? DNA sequence DG(X1):DC(Y139) DA(X2):DT(Y138) DT(X3):DA(Y137) DG(X4):DC(Y136) DT(X5):DA(Y135) DA(X6):DT(Y134) DT(X7):DA(Y133) DA(X8):DT(Y132) DT(X9):DA(Y131) DA(X10):DT(Y130) DT(X11):DA(Y129) DC(X12):DG(Y128) DT(X13):DA(Y127) DG(X14):DC(Y126) DA(X15):DT(Y125) DC(X16):DG(Y124) DA(X17):DT(Y123) DC(X18):DG(Y122) DG(X19):DC(Y121) DT(X20):DA(Y120) DG(X21):DC(Y119) DC(X22):DG(Y118) DC(X23):DG(Y117) DT(X24):DA(Y116) DG(X25):DC(Y115) DG(X26):DC(Y114) DA(X27):DT(Y113) DG(X28):DC(Y112) DA(X29):DT(Y111) DC(X30):DG(Y110) DT(X31):DA(Y109) DA(X32):DT(Y108) DG(X33):DC(Y107) DG(X34):DC(Y106) DG(X35):DC(Y105) DA(X36):DT(Y104) DG(X37):DC(Y103) DT(X38):DA(Y102) DA(X39):DT(Y101) DA(X40):DT(Y100) DT(X41):DA(Y99) DC(X42):DG(Y98) DC(X43):DG(Y97) DC(X44):DG(Y96) DC(X45):DG(Y95) DT(X46):DA(Y94) DT(X47):DA(Y93) DG(X48):DC(Y92) DG(X49):DC(Y91) DC(X50):DG(Y90) DG(X51):DC(Y89) DG(X52):DC(Y88) DT(X53):DA(Y87) DT(X54):DA(Y86) DA(X55):DT(Y85) DA(X56):DT(Y84) DA(X57):DT(Y83) DA(X58):DT(Y82) DC(X59):DG(Y81) DG(X60):DC(Y80) DC(X61):DG(Y79) DG(X62):DC(Y78) DG(X63):DC(Y77) DG(X64):DC(Y76) DG(X65):DC(Y75) DG(X66):DC(Y74) DA(X67):DT(Y73) DC(X68):DG(Y72) DA(X69):DT(Y71) DG(X70):DC(Y70) DC(X71):DG(Y69) DG(X72):DC(Y68) DC(X73):DG(Y67) DG(X74):DC(Y66) DT(X75):DA(Y65) DA(X76):DT(Y64) DC(X77):DG(Y63) DG(X78):DC(Y62) DT(X79):DA(Y61) DG(X80):DC(Y60) DC(X81):DG(Y59) DG(X82):DC(Y58) DT(X83):DA(Y57) DT(X84):DA(Y56) DT(X85):DA(Y55) DA(X86):DT(Y54) DA(X87):DT(Y53) DG(X88):DC(Y52) DC(X89):DG(Y51) DG(X90):DC(Y50) DG(X91):DC(Y49) DT(X92):DA(Y48) DG(X93):DC(Y47) DC(X94):DG(Y46) DT(X95):DA(Y45) DA(X96):DT(Y44) DG(X97):DC(Y43) DA(X98):DT(Y42) DG(X99):DC(Y41) DC(X100):DG(Y40) DT(X101):DA(Y39) DG(X102):DC(Y38) DT(X103):DA(Y37) DC(X104):DG(Y36) DT(X105):DA(Y35) DA(X106):DT(Y34) DC(X107):DG(Y33) DG(X108):DC(Y32) DA(X109):DT(Y31) DC(X110):DG(Y30) DC(X111):DG(Y29) DA(X112):DT(Y28) DA(X113):DT(Y27) DT(X114):DA(Y26) DT(X115):DA(Y25) DG(X116):DC(Y24) DA(X117):DT(Y23) DG(X118):DC(Y22) DC(X119):DG(Y21) DG(X120):DC(Y20) DG(X121):DC(Y19) DC(X122):DG(Y18) DC(X123):DG(Y17) DT(X124):DA(Y16) DC(X125):DG(Y15) DG(X126):DC(Y14) DG(X127):DC(Y13) DC(X128):DG(Y12) DA(X129):DT(Y11) DC(X130):DG(Y10) DC(X131):DG(Y9) DG(X132):DC(Y8) DG(X133):DC(Y7) DG(X134):DC(Y6) DA(X135):DT(Y5) DT(X136):DA(Y4) DT(X137):DA(Y3) DC(X138):DG(Y2) DT(X139):DA(Y1) chainN ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk >7jzv_NOPQnopq:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE BRCA1-UBCH5C/BARD1 E3-E2 MODULE BOUND TO A NUCLEOSOME organism=HOMO SAPIENS DNA sequence DA(Y1):DT(X139) DG(Y2):DC(X138) DA(Y3):DT(X137) DA(Y4):DT(X136) DT(Y5):DA(X135) DC(Y6):DG(X134) DC(Y7):DG(X133) DC(Y8):DG(X132) DG(Y9):DC(X131) DG(Y10):DC(X130) DT(Y11):DA(X129) DG(Y12):DC(X128) DC(Y13):DG(X127) DC(Y14):DG(X126) DG(Y15):DC(X125) DA(Y16):DT(X124) DG(Y17):DC(X123) DG(Y18):DC(X122) DC(Y19):DG(X121) DC(Y20):DG(X120) DG(Y21):DC(X119) DC(Y22):DG(X118) DT(Y23):DA(X117) DC(Y24):DG(X116) DA(Y25):DT(X115) DA(Y26):DT(X114) DT(Y27):DA(X113) DT(Y28):DA(X112) DG(Y29):DC(X111) DG(Y30):DC(X110) DT(Y31):DA(X109) DC(Y32):DG(X108) DG(Y33):DC(X107) DT(Y34):DA(X106) DA(Y35):DT(X105) DG(Y36):DC(X104) DA(Y37):DT(X103) DC(Y38):DG(X102) DA(Y39):DT(X101) DG(Y40):DC(X100) DC(Y41):DG(X99) DT(Y42):DA(X98) DC(Y43):DG(X97) DT(Y44):DA(X96) DA(Y45):DT(X95) DG(Y46):DC(X94) DC(Y47):DG(X93) DA(Y48):DT(X92) DC(Y49):DG(X91) DC(Y50):DG(X90) DG(Y51):DC(X89) DC(Y52):DG(X88) DT(Y53):DA(X87) DT(Y54):DA(X86) DA(Y55):DT(X85) DA(Y56):DT(X84) DA(Y57):DT(X83) DC(Y58):DG(X82) DG(Y59):DC(X81) DC(Y60):DG(X80) DA(Y61):DT(X79) DC(Y62):DG(X78) DG(Y63):DC(X77) DT(Y64):DA(X76) DA(Y65):DT(X75) DC(Y66):DG(X74) DG(Y67):DC(X73) DC(Y68):DG(X72) DG(Y69):DC(X71) DC(Y70):DG(X70) DT(Y71):DA(X69) DG(Y72):DC(X68) DT(Y73):DA(X67) DC(Y74):DG(X66) DC(Y75):DG(X65) DC(Y76):DG(X64) DC(Y77):DG(X63) DC(Y78):DG(X62) DG(Y79):DC(X61) DC(Y80):DG(X60) DG(Y81):DC(X59) DT(Y82):DA(X58) DT(Y83):DA(X57) DT(Y84):DA(X56) DT(Y85):DA(X55) DA(Y86):DT(X54) DA(Y87):DT(X53) DC(Y88):DG(X52) DC(Y89):DG(X51) DG(Y90):DC(X50) DC(Y91):DG(X49) DC(Y92):DG(X48) DA(Y93):DT(X47) DA(Y94):DT(X46) DG(Y95):DC(X45) DG(Y96):DC(X44) DG(Y97):DC(X43) DG(Y98):DC(X42) DA(Y99):DT(X41) DT(Y100):DA(X40) DT(Y101):DA(X39) DA(Y102):DT(X38) DC(Y103):DG(X37) DT(Y104):DA(X36) DC(Y105):DG(X35) DC(Y106):DG(X34) DC(Y107):DG(X33) DT(Y108):DA(X32) DA(Y109):DT(X31) DG(Y110):DC(X30) DT(Y111):DA(X29) DC(Y112):DG(X28) DT(Y113):DA(X27) DC(Y114):DG(X26) DC(Y115):DG(X25) DA(Y116):DT(X24) DG(Y117):DC(X23) DG(Y118):DC(X22) DC(Y119):DG(X21) DA(Y120):DT(X20) DC(Y121):DG(X19) DG(Y122):DC(X18) DT(Y123):DA(X17) DG(Y124):DC(X16) DT(Y125):DA(X15) DC(Y126):DG(X14) DA(Y127):DT(X13) DG(Y128):DC(X12) DA(Y129):DT(X11) DT(Y130):DA(X10) DA(Y131):DT(X9) DT(Y132):DA(X8) DA(Y133):DT(X7) DT(Y134):DA(X6) DA(Y135):DT(X5) DC(Y136):DG(X4) DA(Y137):DT(X3) DT(Y138):DA(X2) DC(Y139):DG(X1) chainN ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO chainP ( 38) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainn chaino chainp chainq prot.sequence ksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/rsrkesysvyvykvlkqvhpdtgisskAmgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/valreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkrisgliyeEtrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ksrssraglqfpvgrvhrllrkgnyaervgagapvymAavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/krsrkesysvyvykvlkqvhpdtgisskamgimnsfvNdiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/tvalreirryqkstellirklpfqrlvreiaqdfktdLrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkrisgliyeetrgvlkvfLenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >7k04_7A:P-loop_containing_nucleoside_triphosphate_hydrolases;TFB5-like; title=STRUCTURE OF TFIIH/RAD4-RAD23-RAD33/DNA IN DNA OPENING organism=? DNA sequence DT(W2):DA(Y23) DG(W3):DC(Y22) DA(W4):DT(Y21) DC(W5):DG(Y20) DT(W6):DA(Y19) DC(W7):DG(Y18) DA(W8):DT(Y17) DA(W9):DT(Y16) DC(W10):DG(Y15) DA(W11):DT(Y14) DT(W12):DA(Y13) DC(W13):DG(Y12) DC(W14):DG(Y11) DA(W15):DT(Y10) DA(W16):DA(Y5) DA(W17):DA(Y4) DC(W18):DC(Y3) DA(W19):DG(Y2) DC(W20):DC(Y1) DT(W21):DT(Y0) DG(W22):DC(Y-1) DC(W23):DT(Y-2) DG(W24):DA(Y-3) DA(W25):DT(Y-4) chainA (359) HIS472 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) ARG494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (382) GLN495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (385) MET498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 (433) ASN554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (435) PHE556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 (437) ASN558 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (439) GLU560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 (473) VAL594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (476) PHE597 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 (478) PHE599 0 0 0 0 0 0 0 0 0 0 0 0 0 55 4 0 0 0 0 0 0 0 0 0 (486) PRO607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 chain7 (309) ASP441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 (332) ARG464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (334) ARG466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence padfvpdsvsgmfrshdfsylrlrpdhasrplwispsdgriilesfsplaeqaqdflvtiaepisrpshiheykitayslyaavsvgletddiisvldrlskvpvaesiinfikgatisygkvklvikhnryfvettqadilqmllndsvigplridsdhqvqppedvlereeedddidavhsfeianesvevvkkrcqeidypvleeydfrndhrnpdldidlkpstqirpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflqwctlqpencavftsDnkemfqtesglvvstysmvantRnRshdsqkvmdfltgrewgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeanwmelsqkghianvqcaevwcpmtaefyqeylretarkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpqqermnilqnfqyndqintiflskvgdtsidlpeatcliqisshygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmenipnlayasprerrellqevllkneea/ydseefedvtdgnevrnvcsneerkrrkyfhmlylvclmvhgfirnewinskrlsrklsnlvpekvfellhpqkdeelplrstrklldglkkcmelwqkhwkitkkydneglymrtwkeiemsannkrkfktlkrsdflravskghgdpdisvqgfvamlracnvnarlimscqppdftnmkidtslngnnaykdmvkypifwcevwdkfskkwitvdpvnlktieqvrlhsklapkgvaccernmlryviaydrkygcrdvtrryaqwmnskvrkrritkddfgekwfrkvitalhhrkrtkiddyedqyffrrdesegipdsvqdlknhpyyvleqdikqtqivkpgckecgylkvHgkvgkvlkvyakrdiadlksaRQwyMngrilktgsrckkvikrtveederlysfedtelyipplasasgeitkNtFgNiEvfaptmipgncclvenpvaikaarflgvefapaVtsFkFergstvkPvlsgivvakwlreaietaidgswntlllklrirsklns >7k0y_ABC: title=CRYO-EM STRUCTURE OF ACTIVATED-FORM DNA-PK (COMPLEX VI) organism=? DNA sequence DG(D1):DC(G40) DC(D2):DG(G39) DA(D3):DT(G38) DT(D4):DA(G37) DG(D5):DC(G36) DC(D6):DG(G35) DT(D7):DA(G34) DC(D8):DG(G33) DT(D9):DA(G32) DA(D10):DT(G31) DC(D11):DG(G30) DT(D12):DA(G29) DG(D13):DC(G28) DC(D14):DG(G27) DT(D15):DA(G26) DT(D16):DA(G25) DC(D17):DG(F24) DG(D18):DC(F23) DA(D19):DT(F22) DT(D20):DA(F21) DA(D21):DT(F20) DT(D22):DA(F19) DC(D23):DG(F18) DG(D24):DC(F17) DA(E25):DT(F16) DA(E26):DT(F15) DG(E27):DC(F14) DC(E28):DG(F13) DA(E29):DT(F12) DG(E30):DC(F11) DT(E31):DA(F10) DA(E32):DT(F9) DG(E33):DC(F8) DA(E34):DT(F7) DG(E35):DC(F6) DC(E36):DG(F5) DA(E37):DT(F4) chainA (258) ARG264 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) ASP405 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (210) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (385) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgdDrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpgkwkvptykdyvdlfrhllssdqmmdsilaseslnhllydefvksvlkivekldltdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegkyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsalsdetknnwevsalsraaqkgfnkvvlkhlkktknlssneaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgqclpsldlsckqlasgllelafafgglcerlvslllnpavlstavihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevrkkkyieirkeareaanelemdelnrhecmapltalvkhmhrslprdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehpqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltpdisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrileedsekviaglyqrafqhlseavqaaeeaagvidaymtladfcdqqlrkeeenasvidsaelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/kysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplievtaqeifqaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkfladvddlldmi >7k0y_B:SPOC_domain-like;vWA-like; title=CRYO-EM STRUCTURE OF ACTIVATED-FORM DNA-PK (COMPLEX VI) organism=? DNA sequence DT(F4):DA(E37) DG(F5):DC(E36) DC(F6):DG(E35) DT(F7):DA(E34) DC(F8):DG(E33) DT(F9):DA(E32) DA(F10):DT(E31) DC(F11):DG(E30) DT(F12):DA(E29) DG(F13):DC(E28) DC(F14):DG(E27) DT(F15):DA(E26) DT(F16):DA(E25) DC(F17):DG(D24) DG(F18):DC(D23) DA(F19):DT(D22) DT(F20):DA(D21) DA(F21):DT(D20) DT(F22):DA(D19) DC(F23):DG(D18) DG(F24):DC(D17) DA(G25):DT(D16) DA(G26):DT(D15) DG(G27):DC(D14) DC(G28):DG(D13) DA(G29):DT(D12) DG(G30):DC(D11) DT(G31):DA(D10) DA(G32):DT(D9) DG(G33):DC(D8) DA(G34):DT(D7) DG(G35):DC(D6) DC(G36):DG(D5) DA(G37):DT(D4) DT(G38):DA(D3) DG(G39):DC(D2) DC(G40):DG(D1) chainB (210) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy >7k19_A:Protein_kinase-like_PK-like;ARM_repeat; title=CRYOEM STRUCTURE OF DNA-PK CATALYTIC SUBUNIT COMPLEXED WITH DNA (COMPLEX I) organism=HOMO SAPIENS DNA sequence DG(D1):DC(G40) DC(D2):DG(G39) DA(D3):DT(G38) DT(D4):DA(G37) DG(D5):DC(G36) DC(D6):DG(G35) DT(D7):DA(G34) DC(D8):DG(G33) DT(D9):DA(G32) DA(D10):DT(G31) DC(D11):DG(G30) DT(D12):DA(G29) DG(D13):DC(G28) DC(D14):DG(G27) DT(D15):DA(G26) DT(D16):DA(G25) chainA (115) LYS122 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 prot.sequence vrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraaKckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkryavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvkvptykdyvdlfrhllssdqmmdsilaslnhllydefvksvlkivekldltleiqtmiptsdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegkyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylkisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqppmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgssllkavafflesiamspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapqclpsldlsckqlasgllelafafgglcerlvslllnpavlstageyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevstlseemsqfdfselnrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtshsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltdisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrileldsekviaglyqrafqhlseavqaaagvidaymtladfcdqqlrkeeeqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm >7k1b_A:Protein_kinase-like_PK-like;ARM_repeat; title=CRYOEM STRUCTURE OF DNA-PK CATALYTIC SUBUNIT COMPLEXED WITH DNA (COMPLEX II) organism=HOMO SAPIENS DNA sequence DA(G25):DT(D16) DA(G26):DT(D15) DG(G27):DC(D14) DC(G28):DG(D13) DA(G29):DT(D12) DG(G30):DC(D11) DT(G31):DA(D10) DA(G32):DT(D9) DG(G33):DC(D8) DA(G34):DT(D7) DG(G35):DC(D6) DC(G36):DG(D5) DA(G37):DT(D4) DT(G38):DA(D3) DG(G39):DC(D2) DC(G40):DG(D1) chainA (258) ARG264 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (396) THR402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (399) ASP405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 prot.sequence gvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdTgdDrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpptykdyvdlfrhllssdqmmdsilaeslnhllydefvksvlkivekldltleiqtmiptsdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegkyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylksalsraaqkgfnkvvlkhlkktisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqppmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgssllkavafflesiamspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiappsldlsckqlasgllelafafgglcerlvslllnshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevstlseemsqfdfstgelemdelnrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtshsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltdisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrileldsekviaglyqrafqhlseavqaaagvidaymtladfcdqqlrkeeeqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm >7k1j_A:Protein_kinase-like_PK-like;ARM_repeat; title=CRYOEM STRUCTURE OF INACTIVATED-FORM DNA-PK (COMPLEX III) organism=? DNA sequence DT(F4):DA(E37) DG(F5):DC(E36) DC(F6):DG(E35) DT(F7):DA(E34) DC(F8):DG(E33) DT(F9):DA(E32) DA(F10):DT(E31) DC(F11):DG(E30) DT(F12):DA(E29) DG(F13):DC(E28) DC(F14):DG(E27) DT(F15):DA(E26) DT(F16):DA(E25) DC(F17):DG(D24) DG(F18):DC(D23) DA(F19):DT(D22) DT(F20):DA(D21) DA(F21):DT(D20) DT(F22):DA(D19) DC(F23):DG(D18) DG(F24):DC(D17) DA(G25):DT(D16) DA(G26):DT(D15) DG(G27):DC(D14) DC(G28):DG(D13) DA(G29):DT(D12) DG(G30):DC(D11) DT(G31):DA(D10) DA(G32):DT(D9) DG(G33):DC(D8) DA(G34):DT(D7) DG(G35):DC(D6) DC(G36):DG(D5) DA(G37):DT(D4) DT(G38):DA(D3) DG(G39):DC(D2) DC(G40):DG(D1) chainA (158) LYS164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkKkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkryavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvkvptykdyvdlfrhllsslnhllydefvksvlkivekldltleiqtmiptsdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegkyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylkalsraaqkgfnkvvlkhlkktknisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqppmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgllkavafflesiamspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapclpsldlsckqlasgllelafafgglcerlvslllnpavlstahfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahftprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevstlseemsqfdfstgelemdelnrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtshsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltdisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrileldsekviaglyqrafqhlseavqaaagvidaymtladfcdqqlrkeeeqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm >7k1j_ABC: title=CRYOEM STRUCTURE OF INACTIVATED-FORM DNA-PK (COMPLEX III) organism=? DNA sequence DG(D1):DC(G40) DC(D2):DG(G39) DA(D3):DT(G38) DT(D4):DA(G37) DG(D5):DC(G36) DC(D6):DG(G35) DT(D7):DA(G34) DC(D8):DG(G33) DT(D9):DA(G32) DA(D10):DT(G31) DC(D11):DG(G30) DT(D12):DA(G29) DG(D13):DC(G28) DC(D14):DG(G27) DT(D15):DA(G26) DT(D16):DA(G25) DC(D17):DG(F24) DG(D18):DC(F23) DA(D19):DT(F22) DT(D20):DA(F21) DA(D21):DT(F20) DT(D22):DA(F19) DC(D23):DG(F18) DG(D24):DC(F17) DA(E25):DT(F16) DA(E26):DT(F15) DG(E27):DC(F14) DC(E28):DG(F13) DA(E29):DT(F12) DG(E30):DC(F11) DT(E31):DA(F10) DA(E32):DT(F9) DG(E33):DC(F8) DA(E34):DT(F7) DG(E35):DC(F6) DC(E36):DG(F5) DA(E37):DT(F4) chainA (158) LYS164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (210) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkKkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkryavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvkvptykdyvdlfrhllsslnhllydefvksvlkivekldltleiqtmiptsdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegkyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylkalsraaqkgfnkvvlkhlkktknisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqppmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgllkavafflesiamspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapclpsldlsckqlasgllelafafgglcerlvslllnpavlstahfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahftprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevstlseemsqfdfstgelemdelnrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtshsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltdisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrileldsekviaglyqrafqhlseavqaaagvidaymtladfcdqqlrkeeeqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/kysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplie >7k1k_ABC: title=CRYOEM STRUCTURE OF INACTIVATED-FORM DNA-PK (COMPLEX IV) organism=? DNA sequence DG(D1):DC(G40) DC(D2):DG(G39) DA(D3):DT(G38) DT(D4):DA(G37) DG(D5):DC(G36) DC(D6):DG(G35) DT(D7):DA(G34) DC(D8):DG(G33) DT(D9):DA(G32) DA(D10):DT(G31) DC(D11):DG(G30) DT(D12):DA(G29) DG(D13):DC(G28) DC(D14):DG(G27) DT(D15):DA(G26) DT(D16):DA(G25) DC(D17):DG(F24) DG(D18):DC(F23) DA(D19):DT(F22) DT(D20):DA(F21) DA(D21):DT(F20) DT(D22):DA(F19) DC(D23):DG(F18) DG(D24):DC(F17) DA(E25):DT(F16) DA(E26):DT(F15) DG(E27):DC(F14) DC(E28):DG(F13) DA(E29):DT(F12) DG(E30):DC(F11) DT(E31):DA(F10) DA(E32):DT(F9) DG(E33):DC(F8) DA(E34):DT(F7) DG(E35):DC(F6) chainA (258) ARG264 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) ASP405 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (491) TRP519 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (210) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (385) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 prot.sequence gvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgdDrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvWkvptykdyvdlfrhllssdqmmdsillnhllydefvksvlkivekldltleimiptsdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegkyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylkalsraaqkgfnkvvlkhlkktknlssneaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqppmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgllylrgpfslqatlcwldlllaalecyntfigertvgalqvllkavafflesiamspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgsldlsckqlasgllelafafgglcerlvslllnpavlstahfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevrkkkyieirkeareaanelemdelnrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtshsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltdisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsekviaglyqrafqhlseavqaaagvidaymtladfcdqqlrkeeeqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/kysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplie >7k1k_C:SPOC_domain-like;vWA-like; title=CRYOEM STRUCTURE OF INACTIVATED-FORM DNA-PK (COMPLEX IV) organism=? DNA sequence DG(D1):DC(G40) DC(D2):DG(G39) DA(D3):DT(G38) DT(D4):DA(G37) DG(D5):DC(G36) DC(D6):DG(G35) DT(D7):DA(G34) DC(D8):DG(G33) DT(D9):DA(G32) DA(D10):DT(G31) DC(D11):DG(G30) DT(D12):DA(G29) DG(D13):DC(G28) DC(D14):DG(G27) DT(D15):DA(G26) DT(D16):DA(G25) DC(D17):DG(F24) DG(D18):DC(F23) DA(D19):DT(F22) DT(D20):DA(F21) DA(D21):DT(F20) DT(D22):DA(F19) DC(D23):DG(F18) DG(D24):DC(F17) DA(E25):DT(F16) DA(E26):DT(F15) DG(E27):DC(F14) DC(E28):DG(F13) DA(E29):DT(F12) DG(E30):DC(F11) DT(E31):DA(F10) DA(E32):DT(F9) DG(E33):DC(F8) DA(E34):DT(F7) DG(E35):DC(F6) chainC (385) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplie >7k1n_ABC: title=CRYOEM STRUCTURE OF INACTIVATED-FORM DNA-PK (COMPLEX V) organism=? DNA sequence DG(D1):DC(G40) DC(D2):DG(G39) DA(D3):DT(G38) DT(D4):DA(G37) DG(D5):DC(G36) DC(D6):DG(G35) DT(D7):DA(G34) DC(D8):DG(G33) DT(D9):DA(G32) DA(D10):DT(G31) DC(D11):DG(G30) DT(D12):DA(G29) DG(D13):DC(G28) DC(D14):DG(G27) DT(D15):DA(G26) DT(D16):DA(G25) DC(D17):DG(F24) DG(D18):DC(F23) DA(D19):DT(F22) DT(D20):DA(F21) DA(D21):DT(F20) DT(D22):DA(F19) DC(D23):DG(F18) DG(D24):DC(F17) DA(E25):DT(F16) DA(E26):DT(F15) DG(E27):DC(F14) DC(E28):DG(F13) DA(E29):DT(F12) DG(E30):DC(F11) DT(E31):DA(F10) DA(E32):DT(F9) DG(E33):DC(F8) DA(E34):DT(F7) DG(E35):DC(F6) DC(E36):DG(F5) DA(E37):DT(F4) chainA (489) LYS518 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (490) TRP519 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (210) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkryavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpKWkvptykdyvdlfrhllssdqmmdsilaslnhllydefvksvlkivekldltleiqtmiptsdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegkyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylkevsalsraaqkgfnkvvlkhlkktknlssneaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqppmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgpsldlsckqlasgllelafafgglcerlvslllnpavlstahfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevstlseemsqfdfstgelemdelnrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehpqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltdisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrileldsekviaglyqrafqhlseavqaaagvidaymtladfcdqqlrkeeeqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/kysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplievtaqeifqaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkfladvddlldmi >7k1n_C:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=CRYOEM STRUCTURE OF INACTIVATED-FORM DNA-PK (COMPLEX V) organism=? DNA sequence DG(D1):DC(G40) DC(D2):DG(G39) DA(D3):DT(G38) DT(D4):DA(G37) DG(D5):DC(G36) DC(D6):DG(G35) DT(D7):DA(G34) DC(D8):DG(G33) DT(D9):DA(G32) DA(D10):DT(G31) DC(D11):DG(G30) DT(D12):DA(G29) DG(D13):DC(G28) DC(D14):DG(G27) DT(D15):DA(G26) DT(D16):DA(G25) DC(D17):DG(F24) DG(D18):DC(F23) DA(D19):DT(F22) DT(D20):DA(F21) DA(D21):DT(F20) DT(D22):DA(F19) DC(D23):DG(F18) DG(D24):DC(F17) DA(E25):DT(F16) DA(E26):DT(F15) DG(E27):DC(F14) DC(E28):DG(F13) DA(E29):DT(F12) DG(E30):DC(F11) DT(E31):DA(F10) DA(E32):DT(F9) DG(E33):DC(F8) DA(E34):DT(F7) DG(E35):DC(F6) DC(E36):DG(F5) DA(E37):DT(F4) chainC (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplievtaqeifqaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkfladvddlldmi >7k30_A:PHP_domain-like; title=CRYSTAL STRUCTURE OF ENDONUCLEASE Q COMPLEX WITH 27-MER DUPLEX SUBSTRATE WITH DU AT THE ACTIVE SITE organism=Pyrococcus furiosus DNA sequence DG(C1):DC(B27) DC(C2):DG(B26) DA(C3):DT(B25) DG(C4):DC(B24) DA(C5):DT(B23) DC(C6):DG(B22) DC(C7):DG(B21) DG(C8):DC(B20) DA(C9):DT(B19) DC(C10):DG(B18) DG(C11):DC(B17) DA(C12):BRU(B16) DC(C13):DG(B15) DU(C14):DG(B14) DT(C15):DA(B13) DG(C16):DC(B12) DT(C17):DA(B11) DA(C18):DT(B10) DG(C19):DC(B9) DC(C20):DG(B8) DG(C21):DC(B7) DA(C22):DT(B6) DA(C23):DT(B5) DC(C24):DG(B4) DG(C25):DC(B3) DA(C26):DT(B2) DC(C27):DG(B1) chainA ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ALA16 0 0 0 0 0 0 0 0 0 0 0 0 10 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG82 0 0 0 0 0 0 0 0 0 2 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ASN116 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) HIS139 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) THR142 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) SER171 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) LYS243 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) TYR244 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) TYR377 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivdgdlhihshysKAvsklmtfpiiaenaklkglnlvgtgdslnphwekellkhskpiddgtfevngvkfiltcevedkrRvhhllifptlsqvrefrekvkiystniesegRpnlnltaeeiaemaneldiligpaHafTpwtslykeydslkdaygdakidflelgLSadsdmadmikahhsipylsnsnahspnphrlgrefnrfevkdvtfeeirkaikgvggrkimlnagldprlgKYhltacsrcytkytlqdavslswkcpkcggiikkgvrdrileladtsekpkdrppyvrlaplaeiiamvlgkgieskavkllwnrflrefgseirvlidlpiesiasvhegvakaiwayrnnkliivpggggkYgeiripeeilkakiedln >7k31_A:PHP_domain-like; title=CRYSTAL STRUCTURE OF ENDONUCLEASE Q COMPLEX WITH 27-MER DUPLEX SUBSTRATE WITH DI AT THE ACTIVE SITE organism=Pyrococcus furiosus DNA sequence DG(B1):DC(C27) DT(B2):DA(C26) DC(B3):DG(C25) DG(B4):DC(C24) DT(B5):DA(C23) DT(B6):DA(C22) DC(B7):DG(C21) DG(B8):DC(C20) DC(B9):DG(C19) DT(B10):DA(C18) DA(B11):DT(C17) DC(B12):DG(C16) DA(B13):DT(C15) DT(B14):DI(C14) DG(B15):DC(C13) DT(B16):DA(C12) DC(B17):DG(C11) DG(B18):DC(C10) DT(B19):DA(C9) DC(B20):DG(C8) DG(B21):DC(C7) DG(B22):DC(C6) DT(B23):DA(C5) DC(B24):DG(C4) DT(B25):DA(C3) DG(B26):DC(C2) DC(B27):DG(C1) chainA ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ALA16 0 0 0 0 0 0 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 (114) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (139) HIS139 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) SER171 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) ASN193 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) LYS243 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) TYR244 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivdgdlhihshysKAvsklmtfpiiaenaklkglnlvgtgdslnphwekellkhskpiddgtfevngvkfiltcevedkrRvhhllifptlsqvrefrekvkiystniesegRpnlnltaeeiaemaneldiligpaHaftpwtslykeydslkdaygdakidflelgLSadsdmadmikahhsipylsnsNahspnphrlgrefnrfevkdvtfeeirkaikgvggrkimlnagldprlgKYhltacsrcytkytlqdavslswkcpkcggiikkgvrdrileladtsekpkdrppyvrlaplaeiiamvlgkgieskavkllwnrflrefgseirvlidlpiesiasvhegvakaiwayrnnkliivpggggkygeiripeeilkakiedln >7k32_A:PHP_domain-like; title=CRYSTAL STRUCTURE OF ENDONUCLEASE Q COMPLEX WITH 27-MER DUPLEX SUBSTRATE WITH AN ABASIC LESION AT THE ACTIVE SITE organism=Pyrococcus furiosus DNA sequence DG(B1):DC(C27) DT(B2):DA(C26) DC(B3):DG(C25) DG(B4):DC(C24) DT(B5):DA(C23) DT(B6):DA(C22) DC(B7):DG(C21) DG(B8):DC(C20) DC(B9):DG(C19) DT(B10):DA(C18) DA(B11):DT(C17) DC(B12):DG(C16) DA(B13):DT(C15) DG(B14):3DR(C14) DG(B15):DC(C13) BRU(B16):DA(C12) DC(B17):DG(C11) DG(B18):DC(C10) DT(B19):DA(C9) DC(B20):DG(C8) DG(B21):DC(C7) DG(B22):DC(C6) DT(B23):DA(C5) DC(B24):DG(C4) DT(B25):DA(C3) DG(B26):DC(C2) DC(B27):DG(C1) chainA ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ALA16 0 0 0 0 0 0 0 0 0 0 0 0 4 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 prot.sequence mivdgdlhihshysKAvsklmtfpiiaenaklkglnlvgtgdslnphwekellkhskpiddgtfevngvkfiltcevedkrRvhhllifptlsqvrefrekvkiystniesegrpnlnltaeeiaemaneldiligpahaftpwtslykeydslkdaygdakidflelglsadsdmadmikahhsipylsnsnahspnphrlgrefnrfevkdvtfeeirkaikgvggrkimlnagldprlgkyhltacsrcytkytlqdavslswkcpkcggiikkgvrdrileladtsekpkdrppyvrlaplaeiiamvlgkgieskavkllwnrflrefgseirvlidlpiesiasvhegvakaiwayrnnkliivpggggkygeiripeeilkakiedln >7k33_A:PHP_domain-like; title=CRYSTAL STRUCTURE OF ENDONUCLEASE Q COMPLEX WITH 27-MER DUPLEX SUBSTRATE WITH AN ABASIC LESION AT THE ACTIVE SITE organism=Pyrococcus furiosus DNA sequence DG(B1):DC(C27) DT(B2):DA(C26) DC(B3):DG(C25) DG(B4):DC(C24) DT(B5):DA(C23) DT(B6):DA(C22) DC(B7):DG(C21) DG(B8):DC(C20) DC(B9):DG(C19) DT(B10):DA(C18) DA(B11):DT(C17) DC(B12):DG(C16) DA(B13):DT(C15) DG(B15):DC(C13) DT(B16):DA(C12) DC(B17):DG(C11) DG(B18):DC(C10) DT(B19):DA(C9) DC(B20):DG(C8) DG(B21):DC(C7) DG(B22):DC(C6) DT(B23):DA(C5) DC(B24):DG(C4) DT(B25):DA(C3) DG(B26):DC(C2) DC(B27):DG(C1) chainA ( 15) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ALA16 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 prot.sequence mivdgdlhihshysKAvsklmtfpiiaenaklkglnlvgtgdslnphwekellkhskpiddgtfevngvkfiltcevedkrRvhhllifptlsqvrefrekvkiystniesegrpnlnltaeeiaemaneldiligpahaftpwtslykeydslkdaygdakidflelglsadsdmadmikahhsipylsnsnahspnphrlgrefnrfevkdvtfeeirkaikgvggrkimlnagldprlgkyhltacsrcytkytlqdavslswkcpkcggiikkgvrdrileladtsekpkdrppyvrlaplaeiiamvlgkgieskavkllwnrflrefgseirvlidlpiesiasvhegvakaiwayrnnkliivpggggkygeiripeeilkakiedln >7k5o_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I TIME-RESOLVED STRUCTURE, 1 MIN POST DATP ADDITION organism=Geobacillus stearothermophilus DNA sequence DA(T6):DT(P10) DC(T7):DG(P9) DG(T8):DC(P8) DT(T9):DA(P7) DG(T10):DC(P6) DA(T11):DT(P5) DT(T12):DA(P4) DC(T13):DG(P3) DG(T14):DC(P2) DC(T15):DG(P1) chainA (283) LYS582 0 0 0 5 1 0 0 0 0 0 (288) TYR587 0 0 2 0 0 0 0 0 0 0 (316) ARG615 7 3 0 0 0 0 0 0 0 0 (323) ASN622 0 0 1 0 0 0 0 0 0 0 (326) ASN625 0 1 7 1 0 0 0 0 0 0 (415) TYR714 51 0 0 0 0 0 0 0 0 0 (417) ILE716 2 0 0 0 0 0 0 0 0 0 prot.sequence aftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgIsdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >7k5p_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I TIME-RESOLVED STRUCTURE, 4 MIN POST DATP ADDITION organism=Geobacillus stearothermophilus DNA sequence DG(P1):DC(T15) DC(P2):DG(T14) DG(P3):DC(T13) DA(P4):DT(T12) DT(P5):DA(T11) DC(P6):DG(T10) DA(P7):DT(T9) DC(P8):DG(T8) DG(P9):DC(T7) DT(P10):DA(T6) chainA (283) LYS582 0 0 0 0 0 3 5 0 0 0 (288) TYR587 0 0 0 0 0 0 0 1 0 0 (316) ARG615 0 0 0 0 0 0 0 0 2 7 (323) ASN622 0 0 0 0 0 0 0 1 0 0 (326) ASN625 0 0 0 0 0 0 1 7 1 0 (415) TYR714 0 0 0 0 0 0 0 0 0 46 (498) GLN797 0 0 0 0 0 0 0 0 0 2 (530) HIS829 0 0 0 0 0 0 0 0 1 0 prot.sequence aftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >7k5q_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I TIME-RESOLVED STRUCTURE, 8 MIN POST DATP ADDITION organism=Geobacillus stearothermophilus DNA sequence DA(T6):DT(P10) DC(T7):DG(P9) DG(T8):DC(P8) DT(T9):DA(P7) DG(T10):DC(P6) DA(T11):DT(P5) DT(T12):DA(P4) DC(T13):DG(P3) DG(T14):DC(P2) DC(T15):DG(P1) chainA (283) LYS582 0 0 5 3 0 0 0 0 0 0 (326) ASN625 1 12 8 0 0 0 0 0 0 0 (330) ARG629 1 0 0 0 0 0 0 0 0 0 prot.sequence aftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgrlsstepNlQNipiRleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >7k5r_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I TIME-RESOLVED STRUCTURE, 120 MIN POST DATP ADDITION organism=Geobacillus stearothermophilus DNA sequence DG(P1):DC(T15) DC(P2):DG(T14) DG(P3):DC(T13) DA(P4):DT(T12) DT(P5):DA(T11) DC(P6):DG(T10) DA(P7):DT(T9) DC(P8):DG(T8) DG(P9):DC(T7) DT(P10):DA(T6) DA(P11):DT(T5) chainA (283) LYS582 0 0 0 0 0 0 3 5 0 0 0 (288) TYR587 0 0 0 0 0 0 0 0 1 0 0 (316) ARG615 0 0 0 0 0 0 0 0 0 1 1 (323) ASN622 0 0 0 0 0 0 0 0 1 0 0 (326) ASN625 0 0 0 0 0 0 0 2 9 1 0 (411) PHE710 0 0 0 0 0 0 0 0 0 0 6 (415) TYR714 0 0 0 0 0 0 0 0 0 0 27 prot.sequence aftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >7k5s_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I TIME-RESOLVED STRUCTURE, 4 HR POST DATP AND DCTP ADDITION organism=Geobacillus stearothermophilus DNA sequence DT(T5):DA(P11) DA(T6):DT(P10) DC(T7):DG(P9) DG(T8):DC(P8) DT(T9):DA(P7) DG(T10):DC(P6) DA(T11):DT(P5) DT(T12):DA(P4) DC(T13):DG(P3) DG(T14):DC(P2) chainA (283) LYS582 0 0 0 6 3 0 0 0 0 0 (288) TYR587 0 0 1 0 0 0 0 0 0 0 (316) ARG615 8 2 0 0 0 0 0 0 0 0 (323) ASN622 0 0 1 0 0 0 0 0 0 0 (326) ASN625 0 1 9 3 0 0 0 0 0 0 (330) ARG629 4 11 0 0 0 0 0 0 0 0 (415) TYR714 46 0 0 0 0 0 0 0 0 0 (498) GLN797 3 0 0 0 0 0 0 0 0 0 prot.sequence aftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >7k5t_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I TIME-RESOLVED STRUCTURE, 25.5 HR POST DATP AND DCTP ADDITION organism=Geobacillus stearothermophilus DNA sequence DT(T5):DA(P11) DA(T6):DT(P10) DC(T7):DG(P9) DG(T8):DC(P8) DT(T9):DA(P7) DG(T10):DC(P6) DA(T11):DT(P5) DT(T12):DA(P4) DC(T13):DG(P3) DG(T14):DC(P2) chainA (283) LYS582 0 0 6 2 0 0 0 0 0 0 (288) TYR587 0 1 0 0 0 0 0 0 0 0 (326) ASN625 1 5 2 0 0 0 0 0 0 0 prot.sequence aftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstYiegllkvvrpdtkkvhtifnqaltqtgrlsstepnlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >7k5u_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I TIME-RESOLVED STRUCTURE, 48 HR POST DATP AND DCTP ADDITION organism=Geobacillus stearothermophilus DNA sequence DG(T4):DC(P12) DT(T5):DA(P11) DA(T6):DT(P10) DC(T7):DG(P9) DG(T8):DC(P8) DT(T9):DA(P7) DG(T10):DC(P6) DA(T11):DT(P5) DT(T12):DA(P4) DC(T13):DG(P3) DG(T14):DC(P2) chainA (283) LYS582 0 0 0 6 3 0 0 0 0 0 0 (316) ARG615 8 1 0 0 0 0 0 0 0 0 0 (326) ASN625 0 1 4 2 0 0 0 0 0 0 0 (415) TYR714 48 0 0 0 0 0 0 0 0 0 0 (498) GLN797 3 0 0 0 0 0 0 0 0 0 0 prot.sequence aftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpdtkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqarlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >7k5x_H:Histone-fold; title=CRYO-EM STRUCTURE OF A CHROMATOSOME CONTAINING HUMAN LINKER HISTONE H1.0 organism=? DNA sequence DG(I1):DC(J197) DG(I2):DC(J196) DG(I3):DC(J195) DC(I4):DG(J194) DT(I5):DA(J193) DG(I6):DC(J192) DG(I7):DC(J191) DA(I8):DT(J190) DC(I9):DG(J189) DC(I10):DG(J188) DC(I11):DG(J187) DT(I12):DA(J186) DA(I13):DT(J185) DT(I14):DA(J184) DA(I15):DT(J183) DC(I16):DG(J182) DG(I17):DC(J181) DC(I18):DG(J180) DG(I19):DC(J179) DG(I20):DC(J178) DC(I21):DG(J177) DC(I22):DG(J176) DG(I23):DC(J175) DC(I24):DG(J174) DC(I25):DG(J173) DC(I26):DG(J172) DT(I27):DA(J171) DG(I28):DC(J170) DG(I29):DC(J169) DA(I30):DT(J168) DG(I31):DC(J167) DA(I32):DT(J166) DA(I33):DT(J165) DT(I34):DA(J164) DC(I35):DG(J163) DC(I36):DG(J162) DC(I37):DG(J161) DG(I38):DC(J160) DG(I39):DC(J159) DT(I40):DA(J158) DG(I41):DC(J157) DC(I42):DG(J156) DC(I43):DG(J155) DG(I44):DC(J154) DA(I45):DT(J153) DG(I46):DC(J152) DG(I47):DC(J151) DC(I48):DG(J150) DC(I49):DG(J149) DG(I50):DC(J148) DC(I51):DG(J147) DT(I52):DA(J146) DC(I53):DG(J145) DA(I54):DT(J144) DA(I55):DT(J143) DT(I56):DA(J142) DT(I57):DA(J141) DG(I58):DC(J140) DG(I59):DC(J139) DT(I60):DA(J138) DC(I61):DG(J137) DG(I62):DC(J136) DT(I63):DA(J135) DA(I64):DT(J134) DG(I65):DC(J133) DA(I66):DT(J132) DC(I67):DG(J131) DA(I68):DT(J130) DG(I69):DC(J129) DC(I70):DG(J128) DT(I71):DA(J127) DC(I72):DG(J126) DT(I73):DA(J125) DA(I74):DT(J124) DG(I75):DC(J123) DC(I76):DG(J122) DA(I77):DT(J121) DC(I78):DG(J120) DC(I79):DG(J119) DG(I80):DC(J118) DC(I81):DG(J117) DT(I82):DA(J116) DT(I83):DA(J115) DA(I84):DT(J114) DA(I85):DT(J113) DA(I86):DT(J112) DC(I87):DG(J111) DG(I88):DC(J110) DC(I89):DG(J109) DA(I90):DT(J108) DC(I91):DG(J107) DG(I92):DC(J106) DT(I93):DA(J105) DA(I94):DT(J104) DC(I95):DG(J103) DG(I96):DC(J102) DC(I97):DG(J101) DG(I98):DC(J100) DC(I99):DG(J99) DT(I100):DA(J98) DG(I101):DC(J97) DT(I102):DA(J96) DC(I103):DG(J95) DC(I104):DG(J94) DC(I105):DG(J93) DC(I106):DG(J92) DC(I107):DG(J91) DG(I108):DC(J90) DC(I109):DG(J89) DG(I110):DC(J88) DT(I111):DA(J87) DT(I112):DA(J86) DT(I113):DA(J85) DT(I114):DA(J84) DA(I115):DT(J83) DA(I116):DT(J82) DC(I117):DG(J81) DC(I118):DG(J80) DG(I119):DC(J79) DC(I120):DG(J78) DC(I121):DG(J77) DA(I122):DT(J76) DA(I123):DT(J75) DG(I124):DC(J74) DG(I125):DC(J73) DG(I126):DC(J72) DG(I127):DC(J71) DA(I128):DT(J70) DT(I129):DA(J69) DT(I130):DA(J68) DA(I131):DT(J67) DC(I132):DG(J66) DT(I133):DA(J65) DC(I134):DG(J64) DC(I135):DG(J63) DC(I136):DG(J62) DT(I137):DA(J61) DA(I138):DT(J60) DG(I139):DC(J59) DT(I140):DA(J58) DC(I141):DG(J57) DT(I142):DA(J56) DC(I143):DG(J55) DC(I144):DG(J54) DA(I145):DT(J53) DG(I146):DC(J52) DG(I147):DC(J51) DC(I148):DG(J50) DA(I149):DT(J49) DC(I150):DG(J48) DG(I151):DC(J47) DT(I152):DA(J46) DG(I153):DC(J45) DT(I154):DA(J44) DC(I155):DG(J43) DA(I156):DT(J42) DG(I157):DC(J41) DA(I158):DT(J40) DT(I159):DA(J39) DA(I160):DT(J38) DT(I161):DA(J37) DA(I162):DT(J36) DT(I163):DA(J35) DA(I164):DT(J34) DC(I165):DG(J33) DA(I166):DT(J32) DT(I167):DA(J31) DC(I168):DG(J30) DC(I169):DG(J29) DT(I170):DA(J28) DG(I171):DC(J27) DT(I172):DA(J26) DG(I173):DC(J25) DC(I174):DG(J24) DA(I175):DT(J23) DT(I176):DA(J22) DG(I177):DC(J21) DT(I178):DA(J20) DA(I179):DT(J19) DT(I180):DA(J18) DT(I181):DA(J17) DG(I182):DC(J16) DA(I183):DT(J15) DA(I184):DT(J14) DC(I185):DG(J13) DA(I186):DT(J12) DG(I187):DC(J11) DC(I188):DG(J10) DG(I189):DC(J9) DA(I190):DT(J8) DC(I191):DG(J7) DC(I192):DG(J6) DA(I193):DT(J5) DC(I194):DG(J4) DC(I195):DG(J3) DC(I196):DG(J2) DC(I197):DG(J1) chainH ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7k5y_D:Histone-fold; title=CRYO-EM STRUCTURE OF A CHROMATOSOME CONTAINING HUMAN LINKER HISTONE H1.4 organism=? DNA sequence DG(J1):DC(I197) DG(J2):DC(I196) DG(J3):DC(I195) DG(J4):DC(I194) DT(J5):DA(I193) DG(J6):DC(I192) DG(J7):DC(I191) DT(J8):DA(I190) DC(J9):DG(I189) DG(J10):DC(I188) DC(J11):DG(I187) DT(J12):DA(I186) DG(J13):DC(I185) DT(J14):DA(I184) DT(J15):DA(I183) DC(J16):DG(I182) DA(J17):DT(I181) DA(J18):DT(I180) DT(J19):DA(I179) DA(J20):DT(I178) DC(J21):DG(I177) DA(J22):DT(I176) DT(J23):DA(I175) DG(J24):DC(I174) DC(J25):DG(I173) DA(J26):DT(I172) DC(J27):DG(I171) DA(J28):DT(I170) DG(J29):DC(I169) DG(J30):DC(I168) DA(J31):DT(I167) DT(J32):DA(I166) DG(J33):DC(I165) DT(J34):DA(I164) DA(J35):DT(I163) DT(J36):DA(I162) DA(J37):DT(I161) DT(J38):DA(I160) DA(J39):DT(I159) DT(J40):DA(I158) DC(J41):DG(I157) DT(J42):DA(I156) DG(J43):DC(I155) DA(J44):DT(I154) DC(J45):DG(I153) DA(J46):DT(I152) DC(J47):DG(I151) DG(J48):DC(I150) DT(J49):DA(I149) DG(J50):DC(I148) DC(J51):DG(I147) DC(J52):DG(I146) DT(J53):DA(I145) DG(J54):DC(I144) DG(J55):DC(I143) DA(J56):DT(I142) DG(J57):DC(I141) DA(J58):DT(I140) DC(J59):DG(I139) DT(J60):DA(I138) DA(J61):DT(I137) DG(J62):DC(I136) DG(J63):DC(I135) DG(J64):DC(I134) DA(J65):DT(I133) DG(J66):DC(I132) DT(J67):DA(I131) DA(J68):DT(I130) DA(J69):DT(I129) DT(J70):DA(I128) DC(J71):DG(I127) DC(J72):DG(I126) DC(J73):DG(I125) DC(J74):DG(I124) DT(J75):DA(I123) DT(J76):DA(I122) DG(J77):DC(I121) DG(J78):DC(I120) DC(J79):DG(I119) DG(J80):DC(I118) DG(J81):DC(I117) DT(J82):DA(I116) DT(J83):DA(I115) DA(J84):DT(I114) DA(J85):DT(I113) DA(J86):DT(I112) DA(J87):DT(I111) DC(J88):DG(I110) DG(J89):DC(I109) DC(J90):DG(I108) DG(J91):DC(I107) DG(J92):DC(I106) DG(J93):DC(I105) DG(J94):DC(I104) DG(J95):DC(I103) DA(J96):DT(I102) DC(J97):DG(I101) DA(J98):DT(I100) DG(J99):DC(I99) DC(J100):DG(I98) DG(J101):DC(I97) DC(J102):DG(I96) DG(J103):DC(I95) DT(J104):DA(I94) DA(J105):DT(I93) DC(J106):DG(I92) DG(J107):DC(I91) DT(J108):DA(I90) DG(J109):DC(I89) DC(J110):DG(I88) DG(J111):DC(I87) DT(J112):DA(I86) DT(J113):DA(I85) DT(J114):DA(I84) DA(J115):DT(I83) DA(J116):DT(I82) DG(J117):DC(I81) DC(J118):DG(I80) DG(J119):DC(I79) DG(J120):DC(I78) DT(J121):DA(I77) DG(J122):DC(I76) DC(J123):DG(I75) DT(J124):DA(I74) DA(J125):DT(I73) DG(J126):DC(I72) DA(J127):DT(I71) DG(J128):DC(I70) DC(J129):DG(I69) DT(J130):DA(I68) DG(J131):DC(I67) DT(J132):DA(I66) DC(J133):DG(I65) DT(J134):DA(I64) DA(J135):DT(I63) DC(J136):DG(I62) DG(J137):DC(I61) DA(J138):DT(I60) DC(J139):DG(I59) DC(J140):DG(I58) DA(J141):DT(I57) DA(J142):DT(I56) DT(J143):DA(I55) DT(J144):DA(I54) DG(J145):DC(I53) DA(J146):DT(I52) DG(J147):DC(I51) DC(J148):DG(I50) DG(J149):DC(I49) DG(J150):DC(I48) DC(J151):DG(I47) DC(J152):DG(I46) DT(J153):DA(I45) DC(J154):DG(I44) DG(J155):DC(I43) DG(J156):DC(I42) DC(J157):DG(I41) DA(J158):DT(I40) DC(J159):DG(I39) DC(J160):DG(I38) DG(J161):DC(I37) DG(J162):DC(I36) DG(J163):DC(I35) DA(J164):DT(I34) DT(J165):DA(I33) DT(J166):DA(I32) DC(J167):DG(I31) DT(J168):DA(I30) DC(J169):DG(I29) DC(J170):DG(I28) DA(J171):DT(I27) DG(J172):DC(I26) DG(J173):DC(I25) DG(J174):DC(I24) DC(J175):DG(I23) DG(J176):DC(I22) DG(J177):DC(I21) DC(J178):DG(I20) DC(J179):DG(I19) DG(J180):DC(I18) DC(J181):DG(I17) DG(J182):DC(I16) DT(J183):DA(I15) DA(J184):DT(I14) DT(J185):DA(I13) DA(J186):DT(I12) DG(J187):DC(I11) DG(J188):DC(I10) DG(J189):DC(I9) DT(J190):DA(I8) DC(J191):DG(I7) DC(J192):DG(I6) DA(J193):DT(I5) DG(J194):DC(I4) DC(J195):DG(I3) DC(J196):DG(I2) DC(J197):DG(I1) chainD ( 1) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KrsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7k60_H:Histone-fold; title=CRYO-EM STRUCTURE OF A CHROMATOSOME CONTAINING HUMAN LINKER HISTONE H1.10 organism=? DNA sequence DG(J1):DC(I197) DG(J2):DC(I196) DG(J3):DC(I195) DG(J4):DC(I194) DT(J5):DA(I193) DG(J6):DC(I192) DG(J7):DC(I191) DT(J8):DA(I190) DC(J9):DG(I189) DG(J10):DC(I188) DC(J11):DG(I187) DT(J12):DA(I186) DG(J13):DC(I185) DT(J14):DA(I184) DT(J15):DA(I183) DC(J16):DG(I182) DA(J17):DT(I181) DA(J18):DT(I180) DT(J19):DA(I179) DA(J20):DT(I178) DC(J21):DG(I177) DA(J22):DT(I176) DT(J23):DA(I175) DG(J24):DC(I174) DC(J25):DG(I173) DA(J26):DT(I172) DC(J27):DG(I171) DA(J28):DT(I170) DG(J29):DC(I169) DG(J30):DC(I168) DA(J31):DT(I167) DT(J32):DA(I166) DG(J33):DC(I165) DT(J34):DA(I164) DA(J35):DT(I163) DT(J36):DA(I162) DA(J37):DT(I161) DT(J38):DA(I160) DA(J39):DT(I159) DT(J40):DA(I158) DC(J41):DG(I157) DT(J42):DA(I156) DG(J43):DC(I155) DA(J44):DT(I154) DC(J45):DG(I153) DA(J46):DT(I152) DC(J47):DG(I151) DG(J48):DC(I150) DT(J49):DA(I149) DG(J50):DC(I148) DC(J51):DG(I147) DC(J52):DG(I146) DT(J53):DA(I145) DG(J54):DC(I144) DG(J55):DC(I143) DA(J56):DT(I142) DG(J57):DC(I141) DA(J58):DT(I140) DC(J59):DG(I139) DT(J60):DA(I138) DA(J61):DT(I137) DG(J62):DC(I136) DG(J63):DC(I135) DG(J64):DC(I134) DA(J65):DT(I133) DG(J66):DC(I132) DT(J67):DA(I131) DA(J68):DT(I130) DA(J69):DT(I129) DT(J70):DA(I128) DC(J71):DG(I127) DC(J72):DG(I126) DC(J73):DG(I125) DC(J74):DG(I124) DT(J75):DA(I123) DT(J76):DA(I122) DG(J77):DC(I121) DG(J78):DC(I120) DC(J79):DG(I119) DG(J80):DC(I118) DG(J81):DC(I117) DT(J82):DA(I116) DT(J83):DA(I115) DA(J84):DT(I114) DA(J85):DT(I113) DA(J86):DT(I112) DA(J87):DT(I111) DC(J88):DG(I110) DG(J89):DC(I109) DC(J90):DG(I108) DG(J91):DC(I107) DG(J92):DC(I106) DG(J93):DC(I105) DG(J94):DC(I104) DG(J95):DC(I103) DA(J96):DT(I102) DC(J97):DG(I101) DA(J98):DT(I100) DG(J99):DC(I99) DC(J100):DG(I98) DG(J101):DC(I97) DC(J102):DG(I96) DG(J103):DC(I95) DT(J104):DA(I94) DA(J105):DT(I93) DC(J106):DG(I92) DG(J107):DC(I91) DT(J108):DA(I90) DG(J109):DC(I89) DC(J110):DG(I88) DG(J111):DC(I87) DT(J112):DA(I86) DT(J113):DA(I85) DT(J114):DA(I84) DA(J115):DT(I83) DA(J116):DT(I82) DG(J117):DC(I81) DC(J118):DG(I80) DG(J119):DC(I79) DG(J120):DC(I78) DT(J121):DA(I77) DG(J122):DC(I76) DC(J123):DG(I75) DT(J124):DA(I74) DA(J125):DT(I73) DG(J126):DC(I72) DA(J127):DT(I71) DG(J128):DC(I70) DC(J129):DG(I69) DT(J130):DA(I68) DG(J131):DC(I67) DT(J132):DA(I66) DC(J133):DG(I65) DT(J134):DA(I64) DA(J135):DT(I63) DC(J136):DG(I62) DG(J137):DC(I61) DA(J138):DT(I60) DC(J139):DG(I59) DC(J140):DG(I58) DA(J141):DT(I57) DA(J142):DT(I56) DT(J143):DA(I55) DT(J144):DA(I54) DG(J145):DC(I53) DA(J146):DT(I52) DG(J147):DC(I51) DC(J148):DG(I50) DG(J149):DC(I49) DG(J150):DC(I48) DC(J151):DG(I47) DC(J152):DG(I46) DT(J153):DA(I45) DC(J154):DG(I44) DG(J155):DC(I43) DG(J156):DC(I42) DC(J157):DG(I41) DA(J158):DT(I40) DC(J159):DG(I39) DC(J160):DG(I38) DG(J161):DC(I37) DG(J162):DC(I36) DG(J163):DC(I35) DA(J164):DT(I34) DT(J165):DA(I33) DT(J166):DA(I32) DC(J167):DG(I31) DT(J168):DA(I30) DC(J169):DG(I29) DC(J170):DG(I28) DA(J171):DT(I27) DG(J172):DC(I26) DG(J173):DC(I25) DG(J174):DC(I24) DC(J175):DG(I23) DG(J176):DC(I22) DG(J177):DC(I21) DC(J178):DG(I20) DC(J179):DG(I19) DG(J180):DC(I18) DC(J181):DG(I17) DG(J182):DC(I16) DT(J183):DA(I15) DA(J184):DT(I14) DT(J185):DA(I13) DA(J186):DT(I12) DG(J187):DC(I11) DG(J188):DC(I10) DG(J189):DC(I9) DT(J190):DA(I8) DC(J191):DG(I7) DC(J192):DG(I6) DA(J193):DT(I5) DG(J194):DC(I4) DC(J195):DG(I3) DC(J196):DG(I2) DC(J197):DG(I1) chainH ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7k61_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF 197BP NUCLEOSOME AIDED BY SCFV organism=HOMO SAPIENS DNA sequence DG(J1):DC(I197) DG(J2):DC(I196) DG(J3):DC(I195) DG(J4):DC(I194) DT(J5):DA(I193) DG(J6):DC(I192) DG(J7):DC(I191) DT(J8):DA(I190) DC(J9):DG(I189) DG(J10):DC(I188) DC(J11):DG(I187) DT(J12):DA(I186) DG(J13):DC(I185) DT(J14):DA(I184) DT(J15):DA(I183) DC(J16):DG(I182) DA(J17):DT(I181) DA(J18):DT(I180) DT(J19):DA(I179) DA(J20):DT(I178) DC(J21):DG(I177) DA(J22):DT(I176) DT(J23):DA(I175) DG(J24):DC(I174) DC(J25):DG(I173) DA(J26):DT(I172) DC(J27):DG(I171) DA(J28):DT(I170) DG(J29):DC(I169) DG(J30):DC(I168) DA(J31):DT(I167) DT(J32):DA(I166) DG(J33):DC(I165) DT(J34):DA(I164) DA(J35):DT(I163) DT(J36):DA(I162) DA(J37):DT(I161) DT(J38):DA(I160) DA(J39):DT(I159) DT(J40):DA(I158) DC(J41):DG(I157) DT(J42):DA(I156) DG(J43):DC(I155) DA(J44):DT(I154) DC(J45):DG(I153) DA(J46):DT(I152) DC(J47):DG(I151) DG(J48):DC(I150) DT(J49):DA(I149) DG(J50):DC(I148) DC(J51):DG(I147) DC(J52):DG(I146) DT(J53):DA(I145) DG(J54):DC(I144) DG(J55):DC(I143) DA(J56):DT(I142) DG(J57):DC(I141) DA(J58):DT(I140) DC(J59):DG(I139) DT(J60):DA(I138) DA(J61):DT(I137) DG(J62):DC(I136) DG(J63):DC(I135) DG(J64):DC(I134) DA(J65):DT(I133) DG(J66):DC(I132) DT(J67):DA(I131) DA(J68):DT(I130) DA(J69):DT(I129) DT(J70):DA(I128) DC(J71):DG(I127) DC(J72):DG(I126) DC(J73):DG(I125) DC(J74):DG(I124) DT(J75):DA(I123) DT(J76):DA(I122) DG(J77):DC(I121) DG(J78):DC(I120) DC(J79):DG(I119) DG(J80):DC(I118) DG(J81):DC(I117) DT(J82):DA(I116) DT(J83):DA(I115) DA(J84):DT(I114) DA(J85):DT(I113) DA(J86):DT(I112) DA(J87):DT(I111) DC(J88):DG(I110) DG(J89):DC(I109) DC(J90):DG(I108) DG(J91):DC(I107) DG(J92):DC(I106) DG(J93):DC(I105) DG(J94):DC(I104) DG(J95):DC(I103) DA(J96):DT(I102) DC(J97):DG(I101) DA(J98):DT(I100) DG(J99):DC(I99) DC(J100):DG(I98) DG(J101):DC(I97) DC(J102):DG(I96) DG(J103):DC(I95) DT(J104):DA(I94) DA(J105):DT(I93) DC(J106):DG(I92) DG(J107):DC(I91) DT(J108):DA(I90) DG(J109):DC(I89) DC(J110):DG(I88) DG(J111):DC(I87) DT(J112):DA(I86) DT(J113):DA(I85) DT(J114):DA(I84) DA(J115):DT(I83) DA(J116):DT(I82) DG(J117):DC(I81) DC(J118):DG(I80) DG(J119):DC(I79) DG(J120):DC(I78) DT(J121):DA(I77) DG(J122):DC(I76) DC(J123):DG(I75) DT(J124):DA(I74) DA(J125):DT(I73) DG(J126):DC(I72) DA(J127):DT(I71) DG(J128):DC(I70) DC(J129):DG(I69) DT(J130):DA(I68) DG(J131):DC(I67) DT(J132):DA(I66) DC(J133):DG(I65) DT(J134):DA(I64) DA(J135):DT(I63) DC(J136):DG(I62) DG(J137):DC(I61) DA(J138):DT(I60) DC(J139):DG(I59) DC(J140):DG(I58) DA(J141):DT(I57) DA(J142):DT(I56) DT(J143):DA(I55) DT(J144):DA(I54) DG(J145):DC(I53) DA(J146):DT(I52) DG(J147):DC(I51) DC(J148):DG(I50) DG(J149):DC(I49) DG(J150):DC(I48) DC(J151):DG(I47) DC(J152):DG(I46) DT(J153):DA(I45) DC(J154):DG(I44) DG(J155):DC(I43) DG(J156):DC(I42) DC(J157):DG(I41) DA(J158):DT(I40) DC(J159):DG(I39) DC(J160):DG(I38) DG(J161):DC(I37) DG(J162):DC(I36) DG(J163):DC(I35) DA(J164):DT(I34) DT(J165):DA(I33) DT(J166):DA(I32) DC(J167):DG(I31) DT(J168):DA(I30) DC(J169):DG(I29) DC(J170):DG(I28) DA(J171):DT(I27) DG(J172):DC(I26) DG(J173):DC(I25) DG(J174):DC(I24) DC(J175):DG(I23) DG(J176):DC(I22) DG(J177):DC(I21) DC(J178):DG(I20) DC(J179):DG(I19) DG(J180):DC(I18) DC(J181):DG(I17) DG(J182):DC(I16) DT(J183):DA(I15) DA(J184):DT(I14) DT(J185):DA(I13) DA(J186):DT(I12) DG(J187):DC(I11) DG(J188):DC(I10) DG(J189):DC(I9) DT(J190):DA(I8) DC(J191):DG(I7) DC(J192):DG(I6) DA(J193):DT(I5) DG(J194):DC(I4) DC(J195):DG(I3) DC(J196):DG(I2) DC(J197):DG(I1) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/kvlRDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvIrdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kRsrkesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/kvLRDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7k61_H:Histone-fold; title=CRYO-EM STRUCTURE OF 197BP NUCLEOSOME AIDED BY SCFV organism=? DNA sequence DG(I1):DC(J197) DG(I2):DC(J196) DG(I3):DC(J195) DC(I4):DG(J194) DT(I5):DA(J193) DG(I6):DC(J192) DG(I7):DC(J191) DA(I8):DT(J190) DC(I9):DG(J189) DC(I10):DG(J188) DC(I11):DG(J187) DT(I12):DA(J186) DA(I13):DT(J185) DT(I14):DA(J184) DA(I15):DT(J183) DC(I16):DG(J182) DG(I17):DC(J181) DC(I18):DG(J180) DG(I19):DC(J179) DG(I20):DC(J178) DC(I21):DG(J177) DC(I22):DG(J176) DG(I23):DC(J175) DC(I24):DG(J174) DC(I25):DG(J173) DC(I26):DG(J172) DT(I27):DA(J171) DG(I28):DC(J170) DG(I29):DC(J169) DA(I30):DT(J168) DG(I31):DC(J167) DA(I32):DT(J166) DA(I33):DT(J165) DT(I34):DA(J164) DC(I35):DG(J163) DC(I36):DG(J162) DC(I37):DG(J161) DG(I38):DC(J160) DG(I39):DC(J159) DT(I40):DA(J158) DG(I41):DC(J157) DC(I42):DG(J156) DC(I43):DG(J155) DG(I44):DC(J154) DA(I45):DT(J153) DG(I46):DC(J152) DG(I47):DC(J151) DC(I48):DG(J150) DC(I49):DG(J149) DG(I50):DC(J148) DC(I51):DG(J147) DT(I52):DA(J146) DC(I53):DG(J145) DA(I54):DT(J144) DA(I55):DT(J143) DT(I56):DA(J142) DT(I57):DA(J141) DG(I58):DC(J140) DG(I59):DC(J139) DT(I60):DA(J138) DC(I61):DG(J137) DG(I62):DC(J136) DT(I63):DA(J135) DA(I64):DT(J134) DG(I65):DC(J133) DA(I66):DT(J132) DC(I67):DG(J131) DA(I68):DT(J130) DG(I69):DC(J129) DC(I70):DG(J128) DT(I71):DA(J127) DC(I72):DG(J126) DT(I73):DA(J125) DA(I74):DT(J124) DG(I75):DC(J123) DC(I76):DG(J122) DA(I77):DT(J121) DC(I78):DG(J120) DC(I79):DG(J119) DG(I80):DC(J118) DC(I81):DG(J117) DT(I82):DA(J116) DT(I83):DA(J115) DA(I84):DT(J114) DA(I85):DT(J113) DA(I86):DT(J112) DC(I87):DG(J111) DG(I88):DC(J110) DC(I89):DG(J109) DA(I90):DT(J108) DC(I91):DG(J107) DG(I92):DC(J106) DT(I93):DA(J105) DA(I94):DT(J104) DC(I95):DG(J103) DG(I96):DC(J102) DC(I97):DG(J101) DG(I98):DC(J100) DC(I99):DG(J99) DT(I100):DA(J98) DG(I101):DC(J97) DT(I102):DA(J96) DC(I103):DG(J95) DC(I104):DG(J94) DC(I105):DG(J93) DC(I106):DG(J92) DC(I107):DG(J91) DG(I108):DC(J90) DC(I109):DG(J89) DG(I110):DC(J88) DT(I111):DA(J87) DT(I112):DA(J86) DT(I113):DA(J85) DT(I114):DA(J84) DA(I115):DT(J83) DA(I116):DT(J82) DC(I117):DG(J81) DC(I118):DG(J80) DG(I119):DC(J79) DC(I120):DG(J78) DC(I121):DG(J77) DA(I122):DT(J76) DA(I123):DT(J75) DG(I124):DC(J74) DG(I125):DC(J73) DG(I126):DC(J72) DG(I127):DC(J71) DA(I128):DT(J70) DT(I129):DA(J69) DT(I130):DA(J68) DA(I131):DT(J67) DC(I132):DG(J66) DT(I133):DA(J65) DC(I134):DG(J64) DC(I135):DG(J63) DC(I136):DG(J62) DT(I137):DA(J61) DA(I138):DT(J60) DG(I139):DC(J59) DT(I140):DA(J58) DC(I141):DG(J57) DT(I142):DA(J56) DC(I143):DG(J55) DC(I144):DG(J54) DA(I145):DT(J53) DG(I146):DC(J52) DG(I147):DC(J51) DC(I148):DG(J50) DA(I149):DT(J49) DC(I150):DG(J48) DG(I151):DC(J47) DT(I152):DA(J46) DG(I153):DC(J45) DT(I154):DA(J44) DC(I155):DG(J43) DA(I156):DT(J42) DG(I157):DC(J41) DA(I158):DT(J40) DT(I159):DA(J39) DA(I160):DT(J38) DT(I161):DA(J37) DA(I162):DT(J36) DT(I163):DA(J35) DA(I164):DT(J34) DC(I165):DG(J33) DA(I166):DT(J32) DT(I167):DA(J31) DC(I168):DG(J30) DC(I169):DG(J29) DT(I170):DA(J28) DG(I171):DC(J27) DT(I172):DA(J26) DG(I173):DC(J25) DC(I174):DG(J24) DA(I175):DT(J23) DT(I176):DA(J22) DG(I177):DC(J21) DT(I178):DA(J20) DA(I179):DT(J19) DT(I180):DA(J18) DT(I181):DA(J17) DG(I182):DC(J16) DA(I183):DT(J15) DA(I184):DT(J14) DC(I185):DG(J13) DA(I186):DT(J12) DG(I187):DC(J11) DC(I188):DG(J10) DG(I189):DC(J9) DA(I190):DT(J8) DC(I191):DG(J7) DC(I192):DG(J6) DA(I193):DT(J5) DC(I194):DG(J4) DC(I195):DG(J3) DC(I196):DG(J2) DC(I197):DG(J1) chainH ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7k63_H:Histone-fold; title=CRYO-EM STRUCTURE OF A CHROMATOSOME CONTAINING CHIMERIC LINKER HISTONE GH1.10-NCH1.4 organism=? DNA sequence DG(I1):DC(J197) DG(I2):DC(J196) DG(I3):DC(J195) DC(I4):DG(J194) DT(I5):DA(J193) DG(I6):DC(J192) DG(I7):DC(J191) DA(I8):DT(J190) DC(I9):DG(J189) DC(I10):DG(J188) DC(I11):DG(J187) DT(I12):DA(J186) DA(I13):DT(J185) DT(I14):DA(J184) DA(I15):DT(J183) DC(I16):DG(J182) DG(I17):DC(J181) DC(I18):DG(J180) DG(I19):DC(J179) DG(I20):DC(J178) DC(I21):DG(J177) DC(I22):DG(J176) DG(I23):DC(J175) DC(I24):DG(J174) DC(I25):DG(J173) DC(I26):DG(J172) DT(I27):DA(J171) DG(I28):DC(J170) DG(I29):DC(J169) DA(I30):DT(J168) DG(I31):DC(J167) DA(I32):DT(J166) DA(I33):DT(J165) DT(I34):DA(J164) DC(I35):DG(J163) DC(I36):DG(J162) DC(I37):DG(J161) DG(I38):DC(J160) DG(I39):DC(J159) DT(I40):DA(J158) DG(I41):DC(J157) DC(I42):DG(J156) DC(I43):DG(J155) DG(I44):DC(J154) DA(I45):DT(J153) DG(I46):DC(J152) DG(I47):DC(J151) DC(I48):DG(J150) DC(I49):DG(J149) DG(I50):DC(J148) DC(I51):DG(J147) DT(I52):DA(J146) DC(I53):DG(J145) DA(I54):DT(J144) DA(I55):DT(J143) DT(I56):DA(J142) DT(I57):DA(J141) DG(I58):DC(J140) DG(I59):DC(J139) DT(I60):DA(J138) DC(I61):DG(J137) DG(I62):DC(J136) DT(I63):DA(J135) DA(I64):DT(J134) DG(I65):DC(J133) DA(I66):DT(J132) DC(I67):DG(J131) DA(I68):DT(J130) DG(I69):DC(J129) DC(I70):DG(J128) DT(I71):DA(J127) DC(I72):DG(J126) DT(I73):DA(J125) DA(I74):DT(J124) DG(I75):DC(J123) DC(I76):DG(J122) DA(I77):DT(J121) DC(I78):DG(J120) DC(I79):DG(J119) DG(I80):DC(J118) DC(I81):DG(J117) DT(I82):DA(J116) DT(I83):DA(J115) DA(I84):DT(J114) DA(I85):DT(J113) DA(I86):DT(J112) DC(I87):DG(J111) DG(I88):DC(J110) DC(I89):DG(J109) DA(I90):DT(J108) DC(I91):DG(J107) DG(I92):DC(J106) DT(I93):DA(J105) DA(I94):DT(J104) DC(I95):DG(J103) DG(I96):DC(J102) DC(I97):DG(J101) DG(I98):DC(J100) DC(I99):DG(J99) DT(I100):DA(J98) DG(I101):DC(J97) DT(I102):DA(J96) DC(I103):DG(J95) DC(I104):DG(J94) DC(I105):DG(J93) DC(I106):DG(J92) DC(I107):DG(J91) DG(I108):DC(J90) DC(I109):DG(J89) DG(I110):DC(J88) DT(I111):DA(J87) DT(I112):DA(J86) DT(I113):DA(J85) DT(I114):DA(J84) DA(I115):DT(J83) DA(I116):DT(J82) DC(I117):DG(J81) DC(I118):DG(J80) DG(I119):DC(J79) DC(I120):DG(J78) DC(I121):DG(J77) DA(I122):DT(J76) DA(I123):DT(J75) DG(I124):DC(J74) DG(I125):DC(J73) DG(I126):DC(J72) DG(I127):DC(J71) DA(I128):DT(J70) DT(I129):DA(J69) DT(I130):DA(J68) DA(I131):DT(J67) DC(I132):DG(J66) DT(I133):DA(J65) DC(I134):DG(J64) DC(I135):DG(J63) DC(I136):DG(J62) DT(I137):DA(J61) DA(I138):DT(J60) DG(I139):DC(J59) DT(I140):DA(J58) DC(I141):DG(J57) DT(I142):DA(J56) DC(I143):DG(J55) DC(I144):DG(J54) DA(I145):DT(J53) DG(I146):DC(J52) DG(I147):DC(J51) DC(I148):DG(J50) DA(I149):DT(J49) DC(I150):DG(J48) DG(I151):DC(J47) DT(I152):DA(J46) DG(I153):DC(J45) DT(I154):DA(J44) DC(I155):DG(J43) DA(I156):DT(J42) DG(I157):DC(J41) DA(I158):DT(J40) DT(I159):DA(J39) DA(I160):DT(J38) DT(I161):DA(J37) DA(I162):DT(J36) DT(I163):DA(J35) DA(I164):DT(J34) DC(I165):DG(J33) DA(I166):DT(J32) DT(I167):DA(J31) DC(I168):DG(J30) DC(I169):DG(J29) DT(I170):DA(J28) DG(I171):DC(J27) DT(I172):DA(J26) DG(I173):DC(J25) DC(I174):DG(J24) DA(I175):DT(J23) DT(I176):DA(J22) DG(I177):DC(J21) DT(I178):DA(J20) DA(I179):DT(J19) DT(I180):DA(J18) DT(I181):DA(J17) DG(I182):DC(J16) DA(I183):DT(J15) DA(I184):DT(J14) DC(I185):DG(J13) DA(I186):DT(J12) DG(I187):DC(J11) DC(I188):DG(J10) DG(I189):DC(J9) DA(I190):DT(J8) DC(I191):DG(J7) DC(I192):DG(J6) DA(I193):DT(J5) DC(I194):DG(J4) DC(I195):DG(J3) DC(I196):DG(J2) DC(I197):DG(J1) chainH ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7k6p_A:Histone-fold; title=ACTIVE STATE DOT1 BOUND TO THE UNACETYLATED H4 NUCLEOSOME organism=? DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DG(I72):DC(J76) DA(I73):DT(J75) DT(I74):DA(J74) DT(I75):DA(J73) DC(I76):DG(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainA ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfmtdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >7k6p_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=ACTIVE STATE DOT1 BOUND TO THE UNACETYLATED H4 NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DG(I72):DC(J76) DA(I73):DT(J75) DT(I74):DA(J74) DT(I75):DA(J73) DC(I76):DG(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainA ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfmtdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa/RyrpgtvalreirryqkstellirkLpfqrlvreiaqdfmtdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/KrhrkvlrdniqgitkpairrlarrGgvkrisgliyeetrgvlKvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/AkaktrssraglqfpvgrvhrllrkGnyaervgagapvylaavLeyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa >7k6q_A:Histone-fold; title=ACTIVE STATE DOT1 BOUND TO THE H4K16AC NUCLEOSOME organism=? DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DG(I72):DC(J76) DA(I73):DT(J75) DT(I74):DA(J74) DT(I75):DA(J73) DC(I76):DG(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainA ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfmtdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >7k78_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=ANTIBODY AND NUCLEOSOME COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(I14):DA(J279) DG(I15):DC(J278) DA(I16):DT(J277) DA(I18):DA(J276) DT(I20):DA(J274) DT(I21):DA(J272) DG(I22):DC(J271) DA(I23):DT(J270) DT(I24):DA(J269) DT(I25):DA(J268) DT(I26):DA(J267) DT(I27):DA(J266) DA(I28):DT(J265) DT(I29):DA(J264) DT(I30):DA(J263) DA(I31):DT(J262) DT(I32):DA(J261) DA(I33):DT(J260) DT(I34):DA(J259) DT(I35):DA(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DA(I39):DT(J254) DA(I40):DT(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DA(I44):DT(J249) DA(I45):DT(J248) DG(I46):DC(J247) DT(I47):DA(J246) DA(I48):DT(J245) DA(I49):DT(J244) DA(I50):DT(J243) DA(I51):DT(J242) DA(I52):DT(J241) DA(I53):DT(J240) DT(I54):DA(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DA(I58):DT(J235) DA(I59):DT(J234) DG(I60):DC(J233) DT(I61):DA(J232) DA(I62):DT(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DT(I66):DA(J227) DA(I67):DT(J226) DT(I68):DA(J225) DT(I69):DA(J224) DT(I70):DA(J223) DT(I71):DA(J222) DT(I72):DA(J221) DA(I73):DT(J220) DA(I74):DT(J219) DA(I75):DT(J218) DA(I76):DT(J217) DA(I77):DT(J216) DA(I78):DT(J215) DT(I79):DA(J214) DA(I80):DT(J213) DA(I81):DT(J212) DA(I82):DT(J211) DA(I83):DT(J210) DT(I84):DA(J209) DT(I85):DA(J208) DT(I86):DA(J207) DA(I87):DT(J206) DA(I88):DT(J205) DA(I89):DT(J204) DA(I90):DT(J203) DT(I91):DA(J202) DA(I92):DT(J201) DT(I93):DA(J200) DT(I94):DA(J199) DA(I95):DT(J198) DG(I96):DC(J197) DT(I97):DA(J196) DG(I98):DC(J195) DT(I99):DA(J194) DA(I100):DT(J193) DT(I101):DA(J192) DT(I102):DA(J191) DT(I103):DA(J190) DG(I104):DC(J189) DA(I105):DT(J188) DT(I106):DA(J187) DT(I107):DA(J186) DT(I108):DA(J185) DC(I109):DG(J184) DC(I110):DG(J183) DG(I111):DC(J182) DA(I112):DT(J181) DA(I113):DT(J180) DA(I114):DT(J179) DG(I115):DC(J178) DT(I116):DA(J177) DT(I117):DA(J176) DA(I118):DT(J175) DA(I119):DT(J174) DA(I120):DT(J173) DA(I121):DT(J172) DA(I122):DT(J171) DA(I123):DT(J170) DG(I124):DC(J169) DT(J167):DA(I127) chainA ( 23) ILE156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 30) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 25) ILE156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 1) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence pselalyeirkyqrstdlliskIpfarlvkevtdefttkdqdlRwqsmaimalqeaseaylvgllehtnllalhakritimkkdmqlarrirgqf/dniqgitkpairrlarrggvkrIsgliyeevravlksflesviRdsvtytehakrktvtsldvvyalkrqgrtlygfgg/asqsrsakagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihq/arketyssyiykvlkqthpdtgisqksmsIlnsfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkyssst/ytpselalyeirkyqrstdlliskIpfarlvkevtdefttkdqdlRwqsmaimalqeaseaylvgllehtnllalhakritimkkdmqlarrirgqfi/rdniqgitkpairrlarrggvkRisgliyeevravlksflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfgg/sqsrsakagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpnihq/Rketyssyiykvlkqthpdtgisqksmsilnsfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkyssst >7k78_E:Histone-fold; title=ANTIBODY AND NUCLEOSOME COMPLEX organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(J164):DA(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DT(J168):DA(I125) DC(J169):DG(I124) DT(J170):DA(I123) DT(J171):DA(I122) DT(J172):DA(I121) DT(J173):DA(I120) DT(J174):DA(I119) DT(J175):DA(I118) DA(J176):DT(I117) DA(J177):DT(I116) DC(J178):DG(I115) DT(J179):DA(I114) DT(J180):DA(I113) DT(J181):DA(I112) DC(J182):DG(I111) DG(J183):DC(I110) DG(J184):DC(I109) DA(J185):DT(I108) DA(J186):DT(I107) DA(J187):DT(I106) DT(J188):DA(I105) DC(J189):DG(I104) DA(J190):DT(I103) DA(J191):DT(I102) DA(J192):DT(I101) DT(J193):DA(I100) DA(J194):DT(I99) DC(J195):DG(I98) DA(J196):DT(I97) DC(J197):DG(I96) DT(J198):DA(I95) DA(J199):DT(I94) DA(J200):DT(I93) DT(J201):DA(I92) DA(J202):DT(I91) DT(J203):DA(I90) DT(J204):DA(I89) DT(J205):DA(I88) DT(J206):DA(I87) DA(J207):DT(I86) DA(J208):DT(I85) DA(J209):DT(I84) DT(J210):DA(I83) DT(J211):DA(I82) DT(J212):DA(I81) DT(J213):DA(I80) DA(J214):DT(I79) DT(J215):DA(I78) DT(J216):DA(I77) DT(J217):DA(I76) DT(J218):DA(I75) DT(J219):DA(I74) DT(J220):DA(I73) DA(J221):DT(I72) DA(J222):DT(I71) DA(J223):DT(I70) DA(J224):DT(I69) DA(J225):DT(I68) DT(J226):DA(I67) DA(J227):DT(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DT(J231):DA(I62) DA(J232):DT(I61) DC(J233):DG(I60) DT(J234):DA(I59) DT(J235):DA(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DA(J239):DT(I54) DT(J240):DA(I53) DT(J241):DA(I52) DT(J242):DA(I51) DT(J243):DA(I50) DT(J244):DA(I49) DT(J245):DA(I48) DA(J246):DT(I47) DC(J247):DG(I46) DT(J248):DA(I45) DT(J249):DA(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DT(J253):DA(I40) DT(J254):DA(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DA(J258):DT(I35) DA(J259):DT(I34) DT(J260):DA(I33) DA(J261):DT(I32) DT(J262):DA(I31) DA(J263):DT(I30) DA(J264):DT(I29) DT(J265):DA(I28) DA(J266):DT(I27) DA(J267):DT(I26) DA(J268):DT(I25) DA(J269):DT(I24) DT(J270):DA(I23) DC(J271):DG(I22) DA(J272):DT(I21) DA(J273):DT(I20) DA(J274):DT(I19) DT(J275):DA(I18) DA(J276):DT(I17) DT(J277):DA(I16) DC(J278):DG(I15) DA(J279):DT(I14) chainE ( 25) ILE156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ytpselalyeirkyqrstdlliskIpfarlvkevtdefttkdqdlRwqsmaimalqeaseaylvgllehtnllalhakritimkkdmqlarrirgqfi >7k96_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA TERNARY COMPLEX WITH TEMPLATING CYTOSINE AND INCOMING DEOXYGUANOSINE DIPHOSPHATE organism=? DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 37 0 0 0 0 ( 26) LYS35 7 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7k97_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA DGDP PRODUCT COMPLEX WITH MN2+ organism=? DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) DG(P11):DC(T6) chainA (225) LYS234 0 0 0 0 0 0 0 6 0 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 9 7 (267) ASP276 0 0 0 0 0 0 0 0 0 0 9 (270) ASN279 0 0 0 0 0 0 0 0 0 0 11 (271) LYS280 0 0 0 0 0 0 0 0 0 0 12 (274) ARG283 0 0 0 0 0 0 0 0 0 3 11 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7k9y_A:DNA/RNA_polymerases; title=GSI-IIC RT TEMPLATE-SWITCHING COMPLEX (TWINNED) organism=GEOBACILLUS STEAROTHERMOPHILUS DNA sequence DC(B1) DT(B2) DC(B3) DC(B4) DA(B5) DG(B6) DG(B7) DC(B8) DA(B9) DA(B10) DC(B11) chainA (109) PHE110 0 0 0 0 0 0 0 0 0 0 2 (220) TYR221 0 0 0 0 0 0 0 0 0 5 0 prot.sequence allerilardnlitalkrveanqgapgidgvstdqlrdyirahwstihaqllagtyrpapvrrveipkpgggtrqlgiptvvdrliqqailqeltpifdpdfssssfgFrpgrnahdavrqaqgyiqegyryvvdmdlekffdrvnhdilmsrvarkvkdkrvlkliraylqagvmiegvkvqteegtpqggplspllanillddldkelekrglkfcrYaddcniyvkslragqrvkqsiqrflektlklkvneeksavdrpwkraflgfsftperkarirlaprsiqrlkqrirqltnpnwsismperihrvnqyvmgwigyfrlvetpsvlqtiegwirrrlrlcqwlqwkrvrtrirelralglketavmeiantrkgawrttktpqlhqalgktywtaqglksltqryfelrqghhhhhh >7kbd_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME IN INTERPHASE CHROMOSOME FORMED IN XENOPUS EGG EXTRACT (OLIGO FRACTION) organism=XENOPUS LAEVIS DNA sequence DT(J1):DA(I147) DA(J2):DT(I146) DT(J3):DA(I145) DC(J4):DG(I144) DA(J5):DT(I143) DC(J6):DG(I142) DA(J7):DT(I141) DA(J8):DT(I140) DT(J9):DA(I139) DC(J10):DG(I138) DC(J11):DG(I137) DC(J12):DG(I136) DG(J13):DC(I135) DG(J14):DC(I134) DT(J15):DA(I133) DG(J16):DC(I132) DC(J17):DG(I131) DC(J18):DG(I130) DG(J19):DC(I129) DA(J20):DT(I128) DG(J21):DC(I127) DG(J22):DC(I126) DC(J23):DG(I125) DC(J24):DG(I124) DG(J25):DC(I123) DC(J26):DG(I122) DT(J27):DA(I121) DC(J28):DG(I120) DA(J29):DT(I119) DA(J30):DT(I118) DT(J31):DA(I117) DT(J32):DA(I116) DG(J33):DC(I115) DG(J34):DC(I114) DT(J35):DA(I113) DC(J36):DG(I112) DG(J37):DC(I111) DT(J38):DA(I110) DA(J39):DT(I109) DG(J40):DC(I108) DA(J41):DT(I107) DC(J42):DG(I106) DA(J43):DT(I105) DG(J44):DC(I104) DC(J45):DG(I103) DT(J46):DA(I102) DC(J47):DG(I101) DT(J48):DA(I100) DA(J49):DT(I99) DG(J50):DC(I98) DC(J51):DG(I97) DA(J52):DT(I96) DC(J53):DG(I95) DC(J54):DG(I94) DG(J55):DC(I93) DC(J56):DG(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DC(J62):DG(I86) DG(J63):DC(I85) DC(J64):DG(I84) DA(J65):DT(I83) DC(J66):DG(I82) DG(J67):DC(I81) DT(J68):DA(I80) DA(J69):DT(I79) DC(J70):DG(I78) DG(J71):DC(I77) DC(J72):DG(I76) DG(J73):DC(I75) DC(J74):DG(I74) DT(J75):DA(I73) DG(J76):DC(I72) DT(J77):DA(I71) DC(J78):DG(I70) DC(J79):DG(I69) DC(J80):DG(I68) DC(J81):DG(I67) DC(J82):DG(I66) DG(J83):DC(I65) DC(J84):DG(I64) DG(J85):DC(I63) DT(J87):DA(I62) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DC(J92):DG(I56) DC(J93):DG(I55) DG(J94):DC(I54) DC(J95):DG(I53) DC(J96):DG(I52) DA(J97):DT(I51) DA(J98):DT(I50) DG(J99):DC(I49) DG(J100):DC(I48) DG(J101):DC(I47) DG(J102):DC(I46) DA(J103):DT(I45) DT(J104):DA(I44) DT(J105):DA(I43) DA(J106):DT(I42) DC(J107):DG(I41) DT(J108):DA(I40) DC(J109):DG(I39) DC(J110):DG(I38) DC(J111):DG(I37) DT(J112):DA(I36) DA(J113):DT(I35) DG(J114):DC(I34) DT(J115):DA(I33) DC(J116):DG(I32) DT(J117):DA(I31) DC(J118):DG(I30) DC(J119):DG(I29) DA(J120):DT(I28) DG(J121):DC(I27) DG(J122):DC(I26) DC(J123):DG(I25) DA(J124):DT(I24) DC(J125):DG(I23) DG(J126):DC(I22) DT(J127):DA(I21) DG(J128):DC(I20) DT(J129):DA(I19) DC(J130):DG(I18) DA(J131):DT(I17) DG(J132):DC(I16) DA(J133):DT(I15) DT(J134):DA(I14) DA(J135):DT(I13) DT(J136):DA(I12) DA(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DG(J142):DC(I6) DT(J143):DA(I5) DG(J144):DC(I4) DA(J145):DT(I3) DT(J146):DA(I2) DA(J147):DT(I1) DT(J148):DA(I0) DC(J149):DG(I-1) DC(J150):DG(I-2) DT(J151):DA(I-3) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/rkVLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvfleNvirdavtytehakrktvtamdvvyalkrqgrtlygfg/KasrsakaglqfpvgrihrllrkgnyavRigsgsaiylaatleylcaevlelagnaardnkklrimprhiqlavrnddelaklfegvtiadggvlpniqsallp/ksRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvIrdavtytehakrktvtamdvvyalkrqgrtlygfg/Kasrsakaglqfpvgrihrllrkgnyavrigsgsaiylaatleylcaevlelagnaardnkklrimprhiqlavrnddelaklfegvtiadggvlpniqsallpkk/ksRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >7kbd_C:Histone-fold; title=NUCLEOSOME IN INTERPHASE CHROMOSOME FORMED IN XENOPUS EGG EXTRACT (OLIGO FRACTION) organism=XENOPUS LAEVIS DNA sequence DT(J1):DA(I147) DA(J2):DT(I146) DT(J3):DA(I145) DC(J4):DG(I144) DA(J5):DT(I143) DC(J6):DG(I142) DA(J7):DT(I141) DA(J8):DT(I140) DT(J9):DA(I139) DC(J10):DG(I138) DC(J11):DG(I137) DC(J12):DG(I136) DG(J13):DC(I135) DG(J14):DC(I134) DT(J15):DA(I133) DG(J16):DC(I132) DC(J17):DG(I131) DC(J18):DG(I130) DG(J19):DC(I129) DA(J20):DT(I128) DG(J21):DC(I127) DG(J22):DC(I126) DC(J23):DG(I125) DC(J24):DG(I124) DG(J25):DC(I123) DC(J26):DG(I122) DT(J27):DA(I121) DC(J28):DG(I120) DA(J29):DT(I119) DA(J30):DT(I118) DT(J31):DA(I117) DT(J32):DA(I116) DG(J33):DC(I115) DG(J34):DC(I114) DT(J35):DA(I113) DC(J36):DG(I112) DG(J37):DC(I111) DT(J38):DA(I110) DA(J39):DT(I109) DG(J40):DC(I108) DA(J41):DT(I107) DC(J42):DG(I106) DA(J43):DT(I105) DG(J44):DC(I104) DC(J45):DG(I103) DT(J46):DA(I102) DC(J47):DG(I101) DT(J48):DA(I100) DA(J49):DT(I99) DG(J50):DC(I98) DC(J51):DG(I97) DA(J52):DT(I96) DC(J53):DG(I95) DC(J54):DG(I94) DG(J55):DC(I93) DC(J56):DG(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DC(J62):DG(I86) DG(J63):DC(I85) DC(J64):DG(I84) DA(J65):DT(I83) DC(J66):DG(I82) DG(J67):DC(I81) DT(J68):DA(I80) DA(J69):DT(I79) DC(J70):DG(I78) DG(J71):DC(I77) DC(J72):DG(I76) DG(J73):DC(I75) DC(J74):DG(I74) DT(J75):DA(I73) DG(J76):DC(I72) DT(J77):DA(I71) DC(J78):DG(I70) DC(J79):DG(I69) DC(J80):DG(I68) DC(J81):DG(I67) DC(J82):DG(I66) DG(J83):DC(I65) DC(J84):DG(I64) DG(J85):DC(I63) DT(J87):DA(I62) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DC(J92):DG(I56) DC(J93):DG(I55) DG(J94):DC(I54) DC(J95):DG(I53) DC(J96):DG(I52) DA(J97):DT(I51) DA(J98):DT(I50) DG(J99):DC(I49) DG(J100):DC(I48) DG(J101):DC(I47) DG(J102):DC(I46) DA(J103):DT(I45) DT(J104):DA(I44) DT(J105):DA(I43) DA(J106):DT(I42) DC(J107):DG(I41) DT(J108):DA(I40) DC(J109):DG(I39) DC(J110):DG(I38) DC(J111):DG(I37) DT(J112):DA(I36) DA(J113):DT(I35) DG(J114):DC(I34) DT(J115):DA(I33) DC(J116):DG(I32) DT(J117):DA(I31) DC(J118):DG(I30) DC(J119):DG(I29) DA(J120):DT(I28) DG(J121):DC(I27) DG(J122):DC(I26) DC(J123):DG(I25) DA(J124):DT(I24) DC(J125):DG(I23) DG(J126):DC(I22) DT(J127):DA(I21) DG(J128):DC(I20) DT(J129):DA(I19) DC(J130):DG(I18) DA(J131):DT(I17) DG(J132):DC(I16) DA(J133):DT(I15) DT(J134):DA(I14) DA(J135):DT(I13) DT(J136):DA(I12) DA(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DG(J142):DC(I6) DT(J143):DA(I5) DG(J144):DC(I4) DA(J145):DT(I3) DT(J146):DA(I2) DA(J147):DT(I1) DT(J148):DA(I0) DC(J149):DG(I-1) DC(J150):DG(I-2) DT(J151):DA(I-3) chainC ( 1) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KasrsakaglqfpvgrihrllrkgnyavRigsgsaiylaatleylcaevlelagnaardnkklrimprhiqlavrnddelaklfegvtiadggvlpniqsallp >7kbe_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME ISOLATED FROM METAPHASE CHROMOSOME FORMED IN XENOPUS EGG EXTRACT (OLIGO FRACTION) organism=XENOPUS LAEVIS DNA sequence DG(I-2):DC(J150) DG(I-1):DC(J149) DA(I0):DT(J148) DT(I1):DA(J147) DA(I2):DT(J146) DT(I3):DA(J145) DC(I4):DG(J144) DA(I5):DT(J143) DC(I6):DG(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DA(J137) DA(I12):DT(J136) DT(I13):DA(J135) DA(I14):DT(J134) DT(I15):DA(J133) DC(I16):DG(J132) DT(I17):DA(J131) DG(I18):DC(J130) DA(I19):DT(J129) DC(I20):DG(J128) DA(I21):DT(J127) DC(I22):DG(J126) DG(I23):DC(J125) DT(I24):DA(J124) DG(I25):DC(J123) DC(I26):DG(J122) DC(I27):DG(J121) DT(I28):DA(J120) DG(I29):DC(J119) DG(I30):DC(J118) DA(I31):DT(J117) DG(I32):DC(J116) DA(I33):DT(J115) DC(I34):DG(J114) DT(I35):DA(J113) DA(I36):DT(J112) DG(I37):DC(J111) DG(I38):DC(J110) DG(I39):DC(J109) DA(I40):DT(J108) DG(I41):DC(J107) DT(I42):DA(J106) DA(I43):DT(J105) DA(I44):DT(J104) DT(I45):DA(J103) DC(I46):DG(J102) DC(I47):DG(J101) DC(I48):DG(J100) DC(I49):DG(J99) DT(I50):DA(J98) DT(I51):DA(J97) DG(I52):DC(J96) DG(I53):DC(J95) DC(I54):DG(J94) DG(I55):DC(J93) DG(I56):DC(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I62):DT(J87) DC(I63):DG(J85) DG(I64):DC(J84) DC(I65):DG(J83) DG(I66):DC(J82) DG(I67):DC(J81) DG(I68):DC(J80) DG(I69):DC(J79) DG(I70):DC(J78) DA(I71):DT(J77) DC(I72):DG(J76) DA(I73):DT(J75) DG(I74):DC(J74) DC(I75):DG(J73) DG(I76):DC(J72) DC(I77):DG(J71) DG(I78):DC(J70) DT(I79):DA(J69) DA(I80):DT(J68) DC(I81):DG(J67) DG(I82):DC(J66) DT(I83):DA(J65) DG(I84):DC(J64) DC(I85):DG(J63) DG(I86):DC(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DG(I92):DC(J56) DC(I93):DG(J55) DG(I94):DC(J54) DG(I95):DC(J53) DT(I96):DA(J52) DG(I97):DC(J51) DC(I98):DG(J50) DT(I99):DA(J49) DA(I100):DT(J48) DG(I101):DC(J47) DA(I102):DT(J46) DG(I103):DC(J45) DC(I104):DG(J44) DT(I105):DA(J43) DG(I106):DC(J42) DT(I107):DA(J41) DC(I108):DG(J40) DT(I109):DA(J39) DA(I110):DT(J38) DC(I111):DG(J37) DG(I112):DC(J36) DA(I113):DT(J35) DC(I114):DG(J34) DC(I115):DG(J33) DA(I116):DT(J32) DA(I117):DT(J31) DT(I118):DA(J30) DT(I119):DA(J29) DG(I120):DC(J28) DA(I121):DT(J27) DG(I122):DC(J26) DC(I123):DG(J25) DG(I124):DC(J24) DG(I125):DC(J23) DC(I126):DG(J22) DC(I127):DG(J21) DT(I128):DA(J20) DC(I129):DG(J19) DG(I130):DC(J18) DG(I131):DC(J17) DC(I132):DG(J16) DA(I133):DT(J15) DC(I134):DG(J14) DC(I135):DG(J13) DG(I136):DC(J12) DG(I137):DC(J11) DG(I138):DC(J10) DA(I139):DT(J9) DT(I140):DA(J8) DT(I141):DA(J7) DG(I142):DC(J6) DT(I143):DA(J5) DG(I144):DC(J4) DA(I145):DT(J3) DT(I146):DA(J2) DA(I147):DT(J1) DT(I148):DA(J0) DC(I149):DG(J-1) DC(I150):DG(J-2) DT(I151):DA(J-3) DA(I152):DT(J-4) DG(I153):DC(J-5) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) LYS15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfg/KasrsakaglqfpvgrihrllrkgnyavRigsgsaiylaatleylcaevlelagnaardnkklrimprhiqlavrnddelaklfegvtiadggvlpniqsallpkk/ksRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/rkVlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvfleNvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Kasrsakaglqfpvgrihrllrkgnyavrigsgsaiylaatleylcaevlelagnaardnkklrimprhiqlavrnddelaklfegvtiadggvlpniqsallpkk/sRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7kbe_E:Histone-fold; title=NUCLEOSOME ISOLATED FROM METAPHASE CHROMOSOME FORMED IN XENOPUS EGG EXTRACT (OLIGO FRACTION) organism=XENOPUS LAEVIS DNA sequence DG(I-2):DC(J150) DG(I-1):DC(J149) DA(I0):DT(J148) DT(I1):DA(J147) DA(I2):DT(J146) DT(I3):DA(J145) DC(I4):DG(J144) DA(I5):DT(J143) DC(I6):DG(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DA(J137) DA(I12):DT(J136) DT(I13):DA(J135) DA(I14):DT(J134) DT(I15):DA(J133) DC(I16):DG(J132) DT(I17):DA(J131) DG(I18):DC(J130) DA(I19):DT(J129) DC(I20):DG(J128) DA(I21):DT(J127) DC(I22):DG(J126) DG(I23):DC(J125) DT(I24):DA(J124) DG(I25):DC(J123) DC(I26):DG(J122) DC(I27):DG(J121) DT(I28):DA(J120) DG(I29):DC(J119) DG(I30):DC(J118) DA(I31):DT(J117) DG(I32):DC(J116) DA(I33):DT(J115) DC(I34):DG(J114) DT(I35):DA(J113) DA(I36):DT(J112) DG(I37):DC(J111) DG(I38):DC(J110) DG(I39):DC(J109) DA(I40):DT(J108) DG(I41):DC(J107) DT(I42):DA(J106) DA(I43):DT(J105) DA(I44):DT(J104) DT(I45):DA(J103) DC(I46):DG(J102) DC(I47):DG(J101) DC(I48):DG(J100) DC(I49):DG(J99) DT(I50):DA(J98) DT(I51):DA(J97) DG(I52):DC(J96) DG(I53):DC(J95) DC(I54):DG(J94) DG(I55):DC(J93) DG(I56):DC(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I62):DT(J87) DC(I63):DG(J85) DG(I64):DC(J84) DC(I65):DG(J83) DG(I66):DC(J82) DG(I67):DC(J81) DG(I68):DC(J80) DG(I69):DC(J79) DG(I70):DC(J78) DA(I71):DT(J77) DC(I72):DG(J76) DA(I73):DT(J75) DG(I74):DC(J74) DC(I75):DG(J73) DG(I76):DC(J72) DC(I77):DG(J71) DG(I78):DC(J70) DT(I79):DA(J69) DA(I80):DT(J68) DC(I81):DG(J67) DG(I82):DC(J66) DT(I83):DA(J65) DG(I84):DC(J64) DC(I85):DG(J63) DG(I86):DC(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DG(I92):DC(J56) DC(I93):DG(J55) DG(I94):DC(J54) DG(I95):DC(J53) DT(I96):DA(J52) DG(I97):DC(J51) DC(I98):DG(J50) DT(I99):DA(J49) DA(I100):DT(J48) DG(I101):DC(J47) DA(I102):DT(J46) DG(I103):DC(J45) DC(I104):DG(J44) DT(I105):DA(J43) DG(I106):DC(J42) DT(I107):DA(J41) DC(I108):DG(J40) DT(I109):DA(J39) DA(I110):DT(J38) DC(I111):DG(J37) DG(I112):DC(J36) DA(I113):DT(J35) DC(I114):DG(J34) DC(I115):DG(J33) DA(I116):DT(J32) DA(I117):DT(J31) DT(I118):DA(J30) DT(I119):DA(J29) DG(I120):DC(J28) DA(I121):DT(J27) DG(I122):DC(J26) DC(I123):DG(J25) DG(I124):DC(J24) DG(I125):DC(J23) DC(I126):DG(J22) DC(I127):DG(J21) DT(I128):DA(J20) DC(I129):DG(J19) DG(I130):DC(J18) DG(I131):DC(J17) DC(I132):DG(J16) DA(I133):DT(J15) DC(I134):DG(J14) DC(I135):DG(J13) DG(I136):DC(J12) DG(I137):DC(J11) DG(I138):DC(J10) DA(I139):DT(J9) DT(I140):DA(J8) DT(I141):DA(J7) DG(I142):DC(J6) DT(I143):DA(J5) DG(I144):DC(J4) DA(I145):DT(J3) DT(I146):DA(J2) DA(I147):DT(J1) DT(I148):DA(J0) DC(I149):DG(J-1) DC(I150):DG(J-2) DT(I151):DA(J-3) DA(I152):DT(J-4) DG(I153):DC(J-5) chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger >7kc0_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF THE SACCHAROMYCES CEREVISIAE REPLICATIVE POLYMERASE DELTA IN COMPLEX WITH A PRIMER/TEMPLATE AND THE PCNA CLAMP organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(P5):DT(T21) DT(P6):DA(T20) DG(P7):DC(T19) DA(P8):DT(T18) DC(P9):DG(T17) DC(P10):DG(T16) DA(P11):DT(T15) DT(P12):DA(T14) DG(P13):DC(T13) DA(P14):DT(T12) DT(P15):DA(T11) DT(P16):DA(T10) DA(P17):DT(T9) DC(P18):DG(T8) DG(P19):DC(T7) DA(P20):DT(T6) DA(P21):DT(T5) DT(P22):DA(T4) DT(P23):DA(T3) DG(P24):DC(T2) DC(P25):DG(T1) chainA (615) TYR708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (721) LYS814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 (722) ARG815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (746) ARG839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 (806) ASN899 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 prot.sequence lssferkklptdfdpslydisfqqidaeqsvlngikdentstvvrffgvtseghsvlcnvtgfknylyvpapnssdandqeqinkfvhylnetfdhaidsievvskqsiwgysgdtklpfwkiyvtyphmvnklrtaferghlsfnswfsngtttydniaytlrlmvdcgivgmswitlpkgkysmiepnnrvsscqlevsinyrnliahpaegdwshtaplrimsfsiscagrigvfpepeydpviqianvvsiagakkpfirnvftlntcspitgsmifshateeemlsnwrnfiikvdpdviigynttnfdipyllnrakalkvndfpyfgrlktvkqeikesvfsskaygtretknvnidgrlqldllqfiqreyklrsytlnavsahflgeqkedvhysiisdlqngdsetrrrlavyclkdaylplrlmeklmalvnytemarvtgvpfsyllargqqikvvsqlfrkcleidtvipnmqsqasddqyegatviepirgyydvpiatldfnslypsimmahnlcyttlcnkatverlnlkidedyvitpngdyfvttkrrrgilpiildelisarkrakkdlrdekdpfkrdvlngrqlalkisansvYgftgatvgklpclaisssvtaygrtmilktktavqekycikngykhdavvvygdtdsvmvkfgttdlkeamdlgteaakyvstlfkhpinlefekayfpyllinkKRyaglfwtnpdkfdkldqkglasvRrdscslvsivmnkvlkkiliernvdgalafvretindilhnrvdiskliisktlapnytNpqphavlaermkrregvgpnvgdrvdyviiggndklynraedplfvlenniqvdsryyltnqlqnpiisivapiigdkqangmfvvksikintgsqkgglmsfikkveacksckgplrkgegplcsnclarsgelyikalydvrdleekysrlwtqcqrcagnlhsevlcsnkncdifymrvkvkkelqekveqlskw >7kef_AE: title=RNA POLYMERASE II ELONGATION COMPLEX WITH UNNATURAL BASE DTPT3, RNAM IN SWING STATE organism=? DNA sequence DT(N3):DA(T15) DC(N4):DG(T14) DT(N5):DA(T13) DG(N6):DC(T12) DC(N7):DG(T11) DT(N8):DA(T10) DT(N9):DA(T9) DA(N10):DT(T8) DT(N11):DA(T7) DC(N12):DG(T6) DG(N13):DC(T5) DG(N14):DC(T4) DT(N15):DA(T3) DA(N16):DT(T2) DG(N17):DC(T1) chainA (1331) ARG1386 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcelvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/dqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >7khb_CDF: title=ESCHERICHIA COLI RNA POLYMERASE AND RRNBP1 PROMOTER OPEN COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(Y1):DG(X80) DT(Y2):DA(X79) DC(Y3):DG(X78) DG(Y4):DC(X77) DT(Y5):DA(X76) DA(Y6):DT(X75) DG(Y7):DC(X74) DA(Y8):DT(X73) DG(Y9):DC(X72) DT(Y10):DA(X71) DC(Y11):DG(X70) DC(Y12):DG(X69) DG(Y13):DC(X68) DT(Y14):DA(X67) DG(Y15):DC(X66) DT(Y16):DA(X65) DC(Y17):DG(X64) DA(Y18):DT(X63) DT(Y23):DA(X58) DG(Y24):DC(X57) DG(Y25):DC(X56) DC(Y26):DG(X55) DG(Y27):DC(X54) DC(Y28):DG(X53) DA(Y29):DT(X52) DT(Y30):DA(X51) DT(Y31):DA(X50) DA(Y32):DT(X49) DT(Y33):DA(X48) DA(Y34):DT(X47) DG(Y35):DC(X46) DG(Y36):DC(X45) DG(Y37):DC(X44) DA(Y38):DT(X43) DG(Y39):DC(X42) DT(Y40):DA(X41) DT(Y41):DA(X40) DA(Y42):DT(X39) DT(Y43):DA(X38) DT(Y44):DA(X37) DC(Y45):DG(X36) DC(Y46):DG(X35) DG(Y47):DC(X34) DG(Y48):DC(X33) DC(Y49):DG(X32) DC(Y50):DG(X31) DT(Y51):DA(X30) DG(Y52):DC(X29) DA(Y53):DT(X28) DC(Y54):DG(X27) DA(Y55):DT(X26) DA(Y56):DT(X25) DG(Y57):DC(X24) DA(Y58):DT(X23) DG(Y59):DC(X22) DG(Y60):DC(X21) DA(Y61):DT(X20) DA(Y62):DT(X19) DA(Y63):DT(X18) DT(Y64):DA(X17) chainC (180) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (479) LEU481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (242) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ASP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 8) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) THR395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (364) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (376) SER517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (432) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (444) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 2 0 0 0 0 0 0 0 0 (445) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (447) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 (448) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 9 0 0 0 0 0 0 0 (452) LYS593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgSWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveravkerlsLgdldtlmpqdminakpisaavkEffgSsqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/teefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLDggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlariptgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/igrttdpVRmyMremgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvddpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRlvisiakkYTNRglqFldliqegniglmkavdkFEyrRgyKfStYaTWWiRQaiTrsiadqartiripvHmiEtinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepIsmeTpIgdDedShlgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvtrERiRQieaKalrklrhpsrsevlrsfld >7khb_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI RNA POLYMERASE AND RRNBP1 PROMOTER OPEN COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(Y1):DG(X80) DT(Y2):DA(X79) DC(Y3):DG(X78) DG(Y4):DC(X77) DT(Y5):DA(X76) DA(Y6):DT(X75) DG(Y7):DC(X74) DA(Y8):DT(X73) DG(Y9):DC(X72) DT(Y10):DA(X71) DC(Y11):DG(X70) DC(Y12):DG(X69) DG(Y13):DC(X68) DT(Y14):DA(X67) DG(Y15):DC(X66) DT(Y16):DA(X65) DC(Y17):DG(X64) DA(Y18):DT(X63) DT(Y23):DA(X58) DG(Y24):DC(X57) DG(Y25):DC(X56) DC(Y26):DG(X55) DG(Y27):DC(X54) DC(Y28):DG(X53) DA(Y29):DT(X52) DT(Y30):DA(X51) DT(Y31):DA(X50) DA(Y32):DT(X49) DT(Y33):DA(X48) DA(Y34):DT(X47) DG(Y35):DC(X46) DG(Y36):DC(X45) DG(Y37):DC(X44) DA(Y38):DT(X43) DG(Y39):DC(X42) DT(Y40):DA(X41) DT(Y41):DA(X40) DA(Y42):DT(X39) DT(Y43):DA(X38) DT(Y44):DA(X37) DC(Y45):DG(X36) DC(Y46):DG(X35) DG(Y47):DC(X34) DG(Y48):DC(X33) DC(Y49):DG(X32) DC(Y50):DG(X31) DT(Y51):DA(X30) DG(Y52):DC(X29) DA(Y53):DT(X28) DC(Y54):DG(X27) DA(Y55):DT(X26) DA(Y56):DT(X25) DG(Y57):DC(X24) DA(Y58):DT(X23) DG(Y59):DC(X22) DG(Y60):DC(X21) DA(Y61):DT(X20) DA(Y62):DT(X19) DA(Y63):DT(X18) DT(Y64):DA(X17) chainD (242) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ASP256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence teefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLDggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlariptgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >7khc_ABF:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=ESCHERICHIA COLI RNA POLYMERASE AND RRNBP1 PROMOTER CLOSED COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DA(Y18):DT(X63) DG(Y19):DC(X62) DT(Y20):DA(X61) DG(Y21):DC(X60) DG(Y22):DC(X59) DT(Y23):DA(X58) DG(Y24):DC(X57) DG(Y25):DC(X56) DC(Y26):DG(X55) DG(Y27):DC(X54) DC(Y28):DG(X53) DA(Y29):DT(X52) DT(Y30):DA(X51) DT(Y31):DA(X50) DA(Y32):DT(X49) DT(Y33):DA(X48) DA(Y34):DT(X47) DG(Y35):DC(X46) DG(Y36):DC(X45) DG(Y37):DC(X44) DA(Y38):DT(X43) DG(Y39):DC(X42) DT(Y40):DA(X41) DT(Y41):DA(X40) DA(Y42):DT(X39) DT(Y43):DA(X38) DT(Y44):DA(X37) DC(Y45):DG(X36) DC(Y46):DG(X35) DG(Y47):DC(X34) DG(Y48):DC(X33) DC(Y49):DG(X32) DC(Y50):DG(X31) DT(Y51):DA(X30) DG(Y52):DC(X29) DA(Y53):DT(X28) DC(Y54):DG(X27) DA(Y55):DT(X26) DA(Y56):DT(X25) DG(Y57):DC(X24) DA(Y58):DT(X23) DG(Y59):DC(X22) DG(Y60):DC(X21) DA(Y61):DT(X20) DA(Y62):DT(X19) DA(Y63):DT(X18) DT(Y64):DA(X17) DT(Y65):DA(X16) DT(Y66):DA(X15) DA(Y67):DT(X14) DA(Y68):DT(X13) DA(Y69):DT(X12) DA(Y70):DT(X11) DT(Y71):A(b10) DA(Y72):DT(X9) DA(Y73):DT(X8) DT(Y74):DA(X7) DT(Y75):DA(X6) DT(Y76):DA(X5) DT(Y77):DA(X4) DC(Y78):DG(X3) DT(Y79):DA(X2) DG(Y80):DC(X1) chainA (259) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (288) ASN294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 chainB (260) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 chainF (260) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (268) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (409) GLU574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (419) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eflkprlvdieqvssthakvtleplergfghtlgnalrrillssmpgcavteveidgvlheystkegvqedileillnlkglavrvqgkdeviltlnksgigpvtaadithdgdveivkpqhvichltdenasismrikvqrgrgyvpastrihseederpigrllvdacyspveriaynveaarveqrtdldklviemetngtidpeeairraatilaeqleafvdlrdvrqpevkeekpefdpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpNlgkkslteikdvlasrglslg/teflkprlvdieqvssthakvtleplergfghtlgnalrrillssmpgcavteveidgvlheystkegvqedileillnlkglavrvqgkdeviltlnksgigpvtaadithdgdveivkpqhvichltdenasismrikvqrgrgyvpastrihseederpigrllvdacyspveriaynveaarveqrtdldklviemetngtidpeeairraatilaeqleafvdlrdvrqpevkeekpefdpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenw/geidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvddpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlrlvisiakkytnrglqfldliqegniglmkavdkfeyrrgYkfstyatWwirqaitrsiadqartiripvhmietinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytlEevgkqfdvtRERiRqieakalrklrhpsrsevlrsfld >7khc_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI RNA POLYMERASE AND RRNBP1 PROMOTER CLOSED COMPLEX organism=? DNA sequence DC(P1):DG(O18) DT(P2):DA(O17) DC(P3):DG(O16) DG(P4):DC(O15) DT(P5):DA(O14) DA(P6):DT(O13) DG(P7):DC(O12) DA(P8):DT(O11) DG(P9):DC(O10) DT(P10):DA(O9) DC(P11):DG(O8) DC(P12):DG(O7) DG(P13):DC(O6) DT(P14):DA(O5) DG(P15):DC(O4) DT(P16):DA(O3) DC(P17):DG(O2) DA(P18):DT(O1) chainC (539) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >7khe_CDF: title=ESCHERICHIA COLI RNA POLYMERASE AND RRNBP1 PROMOTER PRE-OPEN COMPLEX WITH DKSA/PPGPP organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(X20):DA(Y61) DC(X21):DG(Y60) DC(X22):DG(Y59) DT(X23):DA(Y58) DC(X24):DG(Y57) DT(X25):DA(Y56) DT(X26):DA(Y55) DG(X27):DC(Y54) DT(X28):DA(Y53) DC(X29):DG(Y52) DA(X30):DT(Y51) DG(X31):DC(Y50) DG(X32):DC(Y49) DC(X33):DG(Y48) DC(X34):DG(Y47) DG(X35):DC(Y46) DG(X36):DC(Y45) DA(X37):DT(Y44) DA(X38):DT(Y43) DT(X39):DA(Y42) DA(X40):DT(Y41) DA(X41):DT(Y40) DC(X42):DG(Y39) DT(X43):DA(Y38) DC(X44):DG(Y37) DC(X45):DG(Y36) DC(X46):DG(Y35) DT(X47):DA(Y34) DA(X48):DA(Y18) DT(X49):DC(Y17) DA(X50):DT(Y16) DA(X51):DG(Y15) DT(X52):DT(Y14) DG(X53):DG(Y13) DC(X54):DC(Y12) DG(X55):DC(Y11) DT(X63):DT(Y10) DG(X64):DG(Y9) DA(X65):DA(Y8) DC(X66):DG(Y7) DA(X67):DA(Y6) DC(X68):DT(Y5) DG(X69):DG(Y4) DG(X70):DC(Y3) DA(X71):DT(Y2) DC(X72):DC(Y1) chainC (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 chainD chainF ( 12) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 15) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 0 0 0 0 0 0 0 0 (245) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) GLU585 0 0 0 0 0 3 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) ARG588 0 0 0 0 0 4 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) GLN589 0 0 0 3 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/teefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygkLelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/igrttdpvrmyMreMgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvddpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqfldliqegniglmkavdkfEyrRgYKfSTYaTWWirQaitRsiadqartiripvhmiEtinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtrEriRQieakalrklrhpsrsevlrsfld >7kif_CDFMZ: title=MYCOBACTERIUM TUBERCULOSIS WT RNAP TRANSCRIPTION OPEN PROMOTER COMPLEX WITH WHIB7 TRANSCRIPTION FACTOR organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DG(O11):DC(P144) DG(O12):DC(P143) DT(O13):DA(P142) DC(O14):DG(P141) DA(O15):DT(P140) DG(O16):DC(P139) DA(O17):DT(P138) DA(O18):DT(P137) DA(O19):DT(P136) DA(O20):DT(P135) DT(O21):DA(P134) DC(O22):DG(P133) DG(O23):DC(P132) DG(O24):DC(P131) DT(O25):DA(P130) DT(O26):DA(P129) DG(O27):DC(P128) DT(O28):DA(P127) DG(O29):DC(P126) DG(O30):DC(P125) DT(O31):DA(P124) DC(O32):DG(P123) DA(O33):DT(P122) DG(O34):DC(P121) DC(O35):DG(P120) DT(O36):DA(P119) DG(O37):DC(P118) DC(O38):DG(P117) DT(O39):DA(P116) DG(O40):DC(P115) DC(O41):DG(P114) DC(O42):DG(P113) DA(O43):DT(P112) DC(O44):DG(P111) DC(O45):DG(P110) DG(O46):DC(P109) DG(O47):DC(P108) DT(O48):DA(P107) DT(O49):DA(P106) DA(O50):DT(P91) DA(O51):DA(P90) DC(O52):DA(P89) DC(O53):DG(P88) DT(O54):DA(P87) DC(O55):DC(P86) DC(O56):DG(P85) DA(O57):DA(P84) DA(O64):DC(P83) DT(O65):DG(P82) DT(O66):DG(P81) DC(O67):DT(P80) DT(O68):DC(P79) DG(O69):DG(P78) DC(O70):DG(P77) DT(O71):DA(P76) chainC (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 chainD chainF ( 21) ASP226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) VAL228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 24) ARG229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 ( 27) LEU232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 35) LEU240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLU246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 94) ASN299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 ( 97) LEU302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (130) PHE335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ASP336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) SER344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (140) THR345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) TYR346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) TRP349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) TRP350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) ARG357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) HIS371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) THR499 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) GLU501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) ARG502 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 85) SER86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainZ ( 71) ARG83 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG85 0 0 0 0 0 7 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlss/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqLklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrtditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/edesealrqarkdaeltasaDsVRayLkqigkvaLlnaeeEvelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleaNlRLvvslakrytgrgmafldliqegnlgliravekFDytKgYkfSTYatWWiRQaitRamadqartiripvHmvEvinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTRERirqiesktmsklrhpsrsqvlrdyl/ifkvgdtvvyphhgaalveaietrtikgeqkeylvlkvaqgdltvrvpaenaeyvgvrdvvgqegldkvfqvlraphteeptnwSrryKanleklasgdvnkvaevvrdlwrrdqerglsagekrmlakarqilvgelalaestddakaetildevlaa/qrlpvlpchvgdpdlwfadtpaglevaktlcvscpirrqclaaalqraepwgvwggeifdqgsivshkrpRgRprk >7kif_Z: title=MYCOBACTERIUM TUBERCULOSIS WT RNAP TRANSCRIPTION OPEN PROMOTER COMPLEX WITH WHIB7 TRANSCRIPTION FACTOR organism=? DNA sequence DA(P76):DT(O71) DG(P77):DC(O70) DG(P78):DG(O69) DC(P79):DT(O68) DT(P80):DC(O67) DG(P81):DT(O66) DG(P82):DT(O65) DC(P83):DA(O64) DA(P84):DA(O57) DG(P85):DC(O56) DC(P86):DC(O55) DA(P87):DT(O54) DG(P88):DC(O53) DA(P89):DC(O52) DA(P90):DA(O51) DT(P91):DA(O50) DA(P106):DT(O49) DA(P107):DT(O48) DC(P108):DG(O47) DC(P109):DG(O46) DG(P110):DC(O45) DG(P111):DC(O44) DT(P112):DA(O43) DG(P113):DC(O42) DG(P114):DC(O41) DC(P115):DG(O40) DA(P116):DT(O39) DG(P117):DC(O38) DC(P118):DG(O37) DA(P119):DT(O36) DG(P120):DC(O35) DC(P121):DG(O34) DT(P122):DA(O33) DG(P123):DC(O32) DA(P124):DT(O31) DC(P125):DG(O30) DC(P126):DG(O29) DA(P127):DT(O28) DC(P128):DG(O27) DA(P129):DT(O26) DA(P130):DT(O25) DC(P131):DG(O24) DC(P132):DG(O23) DG(P133):DC(O22) DA(P134):DT(O21) DT(P135):DA(O20) DT(P136):DA(O19) DT(P137):DA(O18) DT(P138):DA(O17) DC(P139):DG(O16) DT(P140):DA(O15) DG(P141):DC(O14) DA(P142):DT(O13) DC(P143):DG(O12) DC(P144):DG(O11) chainZ ( 71) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 73) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 7 0 0 0 0 0 prot.sequence qrlpvlpchvgdpdlwfadtpaglevaktlcvscpirrqclaaalqraepwgvwggeifdqgsivshkrpRgRprk >7kim_FMZ: title=MYCOBACTERIUM TUBERCULOSIS WT RNAP TRANSCRIPTION CLOSED PROMOTER COMPLEX WITH WHIB7 TRANSCRIPTION FACTOR organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DG(O11):DC(P144) DG(O12):DC(P143) DT(O13):DA(P142) DC(O14):DG(P141) DA(O15):DT(P140) DG(O16):DC(P139) DA(O17):DT(P138) DA(O18):DT(P137) DA(O19):DT(P136) DA(O20):DT(P135) DT(O21):DA(P134) DC(O22):DG(P133) DG(O23):DC(P132) DG(O24):DC(P131) DT(O25):DA(P130) DT(O26):DA(P129) DG(O27):DC(P128) DT(O28):DA(P127) DG(O29):DC(P126) DG(O30):DC(P125) DT(O31):DA(P124) DC(O32):DG(P123) DA(O33):DT(P122) DG(O34):DC(P121) DC(O35):DG(P120) DT(O36):DA(P119) DG(O37):DC(P118) DC(O38):DG(P117) DT(O39):DA(P116) DG(O40):DC(P115) DC(O41):DG(P114) DC(O42):DG(P113) DA(O43):DT(P112) DC(O44):DG(P111) DC(O45):DG(P110) DG(O46):DC(P109) DG(O47):DC(P108) DT(O48):DA(P107) DT(O49):DA(P106) DA(O50):DT(P105) DA(O51):DT(P104) DC(O52):DG(P103) DC(O53):DG(P102) DT(O54):DA(P101) chainF (144) TRP349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (294) THR499 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) GLU501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) ARG502 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) GLN505 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 77) ARG87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 80) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 chainZ ( 75) ARG83 0 0 0 0 0 0 0 2 8 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG85 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence edesealrqarkdaeltasadsvraylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakrytgrgmafldliqegnlgliravekfdytkgykfstyatWwirqaitramadqartiripvhmvevinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdyl/ifkvgdtvvyphhgaalveaietrtikgeqkeylvlkvaqgdltvrvpaenaeyvgvrdvvgqegldkvfqvlrapRryKanleklasgdvnkvaevvrkrmlakarqilvgelalaestddakaetildevlaa/qtprqrlpvlpchvgdpdlwfadtpaglevaktlcvscpirrqclaaalqraepwgvwggeifdqgsivshkrpRgRprk >7kim_Z: title=MYCOBACTERIUM TUBERCULOSIS WT RNAP TRANSCRIPTION CLOSED PROMOTER COMPLEX WITH WHIB7 TRANSCRIPTION FACTOR organism=? DNA sequence DA(P101):DT(O54) DG(P102):DC(O53) DG(P103):DC(O52) DT(P104):DA(O51) DT(P105):DA(O50) DA(P106):DT(O49) DA(P107):DT(O48) DC(P108):DG(O47) DC(P109):DG(O46) DG(P110):DC(O45) DG(P111):DC(O44) DT(P112):DA(O43) DG(P113):DC(O42) DG(P114):DC(O41) DC(P115):DG(O40) DA(P116):DT(O39) DG(P117):DC(O38) DC(P118):DG(O37) DA(P119):DT(O36) DG(P120):DC(O35) DC(P121):DG(O34) DT(P122):DA(O33) DG(P123):DC(O32) DA(P124):DT(O31) DC(P125):DG(O30) DC(P126):DG(O29) DA(P127):DT(O28) DC(P128):DG(O27) DA(P129):DT(O26) DA(P130):DT(O25) DC(P131):DG(O24) DC(P132):DG(O23) DG(P133):DC(O22) DA(P134):DT(O21) DT(P135):DA(O20) DT(P136):DA(O19) DT(P137):DA(O18) DT(P138):DA(O17) DC(P139):DG(O16) DT(P140):DA(O15) DG(P141):DC(O14) DA(P142):DT(O13) DC(P143):DG(O12) DC(P144):DG(O11) chainZ ( 75) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 8 2 0 0 0 0 0 0 0 ( 77) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 prot.sequence qtprqrlpvlpchvgdpdlwfadtpaglevaktlcvscpirrqclaaalqraepwgvwggeifdqgsivshkrpRgRprk >7kin_CDFM: title=MYCOBACTERIUM TUBERCULOSIS WT RNAP TRANSCRIPTION OPEN PROMOTER COMPLEX WITH WHIB7 PROMOTER organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DA(P76):DT(O79) DG(P77):DC(O78) DG(P78):DC(O77) DC(P79):DG(O76) DT(P80):DA(O75) DG(P81):DC(O74) DG(P82):DC(O73) DC(P83):DG(O72) DA(P84):DT(O71) DG(P85):DC(O70) DC(P86):DG(O69) DA(P87):DT(O68) DG(P88):DC(O67) DA(P89):DT(O66) DA(P90):DT(O65) DT(P91):DA(O64) DT(P104):DA(O51) DT(P105):DA(O50) DA(P106):DT(O49) DA(P107):DT(O48) DC(P108):DG(O47) DC(P109):DG(O46) DG(P110):DC(O45) DG(P111):DC(O44) DT(P112):DA(O43) DG(P113):DC(O42) DG(P114):DC(O41) DC(P115):DG(O40) DA(P116):DT(O39) DG(P117):DC(O38) DC(P118):DG(O37) DA(P119):DT(O36) DG(P120):DC(O35) DC(P121):DG(O34) DT(P122):DA(O33) DG(P123):DC(O32) DA(P124):DT(O31) DC(P125):DG(O30) DC(P126):DG(O29) DA(P127):DT(O28) DC(P128):DG(O27) DA(P129):DT(O26) DA(P130):DT(O25) DC(P131):DG(O24) DC(P132):DG(O23) DG(P133):DC(O22) DA(P134):DT(O21) DT(P135):DA(O20) DT(P136):DA(O19) chainC (373) GLU402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (376) THR405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) THR406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainF ( 99) ARG309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) TYR310 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) PHE335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) ASP336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) TYR341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) TYR346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) TRP349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) TRP350 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLN353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) ARG357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) HIS371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) THR499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (290) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (291) GLU501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 (292) ARG502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (294) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 chainM prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrErmTTqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlss/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnneKrmLQesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqLklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrtditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/alrqarkdaeltasadsvraylkqigkvallnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleanlrlvvslakRYtgrgmafldliqegnlgliravekFDytKgYkfstYatWWiRQaitRamadqartiripvHmvevinklgriqrellqdlgreptpeelakemditpekvleiqqyarepisldqtigdegdsqlgdfiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTRERiRqiesktmsklrhpsrsqvlrdyl/ifkvgdtvvyphhgaalveaietrtikgeqkeylvlkvaqgdltvrvpaenaeyvgvrdvvgqegldkvfqvlraphteeptnwsrrykanleklasgDVnkvaevvrdlwrrdqerglsagekRMlaKaRqilvGelALaEStddAkaetildevlaa >7kle_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY STRUCTURE OF DPO4 BOUND TO N7MG IN THE TEMPLATE BASE PAIRED WITH INCOMING DCTP organism=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) / Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) DNA sequence DG(T7):DC(P13) DA(T8):DT(P12) DA(T9):DT(P11) DT(T10):DA(P10) DC(T11):DG(P9) DC(T12):DG(P8) DT(T13):DA(P7) DT(T14):DA(P6) DC(T15):DG(P5) DC(T16):DG(P4) DC(T17):DG(P3) DC(T18):DG(P2) DC(T19):DG(P1) chainA (332) ARG332 2 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG336 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvRfskfi >7klf_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=TERNARY STRUCTURE OF DPO4 BOUND TO G IN THE TEMPLATE BASE PAIRED WITH INCOMING DCTP organism=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) / Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) DNA sequence DG(T7):DC(P13) DA(T8):DT(P12) DA(T9):DT(P11) DT(T10):DA(P10) DC(T11):DG(P9) DC(T12):DG(P8) DT(T13):DA(P7) DT(T14):DA(P6) DC(T15):DG(P5) DC(T16):DG(P4) DC(T17):DG(P3) DC(T18):DG(P2) DC(T19):DG(P1) chainA (332) ARG332 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagipiveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgisketaysesvkllqkileederkirRigvrfskfi >7kqm_A:DNA/RNA_polymerases; title=BINARY COMPLEX OF TERT (TELOMERASE REVERSE TRANSCRIPTASE) WITH RNA/TELOMERIC DNA HYBRID organism=Tribolium castaneum DNA sequence DT(C1) DT(C2) DC(C3) DT(C4) DT(C5) DT(C6) DG(C7) DT(C8) DG(C9) DC(C10) DA(C11) DC(C12) DC(C13) DT(C14) DG(C15) chainA (256) TYR256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (442) PRO442 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (446) ASN446 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 prot.sequence mvhyyrlslksrqkapkivnskynsilnialknfrlckkhktkkpvqilallqeiipksyfgtttnlkrfykvvekiltqssfecihlsvlhkcydydaipwlqnvepnlrpklllkhnlflldnivkpiiafyykpiktlngheikfirkeeyisfeskvfhklkkmkylvevqdevkprgvlniipkqdnfraivsifpdsarkpffklltskiykvleekyktsgslytcwseftqktqgqiygikvdirdaYgnvkipvlckliqsipthlldsekknfivdhisnqfvafrrkiykwnhgllqgdplsgclcelymafmdrlyfsnldkdafihrtvddyffcsphphkvydfellikgvyqvnptktrtnlpthrhpqdeipycgkifnlttrqvrtlyklppnyeirhkfklwnfnnqisddnparflqkamDfPficNsftkfefntvfndqrtvfanfydamicvaykfdaammalrtsflvndfgfiwlvlsstvrayasrafkkivtykggkyrkvtfqclksiawraflavlkrrteiykglidriksrekltmkfhdgevdasyfcklpekfrfvkinrkasi >7kr3_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=HUMAN DNA LIGASE 1(E346A/E592A) BOUND TO A BULGED DNA SUBSTRATE organism=Homo sapiens DNA sequence DG(D9):DC(C7) DC(D10):DG(C6) DA(D11):DT(C5) DG(D12):DC(C4) DA(D13):DT(C3) DA(D14):DT(C2) DT(D15):DA(C1) DG(D16):DC(B14) DG(D17):DC(B13) DG(D18):DC(B12) DC(D19):DG(B10) DA(D20):DT(B9) DG(D21):DC(B8) DA(D22):DT(B7) DC(D23):DG(B6) DA(D24):DT(B5) DT(D25):DA(B4) DT(D26):DA(B3) chainA ( 44) ARG305 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) PHE635 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (374) ARG643 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 (501) LYS770 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (529) THR798 0 0 0 0 3 8 1 0 0 0 0 0 0 0 0 0 0 0 (603) PHE872 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 prot.sequence dpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsaRlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglalgvgdgvllkavaqatgrqlesvraeaaekgdvglvaensrpppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlrlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlahptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrnqadntgkypdiisripkiklpsvtsfildteavawdrekkqiqpFqvlttrkRkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdyldgvgdtldlvvigaylgrgKragryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislrFprfirvredkqpeqattsaqvaclyrkqs >7kr4_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=HUMAN DNA LIGASE 1(E346A/E592A) BOUND TO A NICKED DNA SUBSTRATE CONTROL DUPLEX organism=Homo sapiens DNA sequence DA(B3):DT(D26) DA(B4):DT(D25) DT(B5):DA(D24) DG(B6):DC(D23) DT(B7):DA(D22) DC(B8):DG(D21) DT(B9):DA(D20) DG(B10):DC(D19) DC(B11):DG(D18) DC(B12):DG(D17) DC(B13):DG(D16) DA(C1):DT(D15) DT(C2):DA(D14) DT(C3):DA(D13) DC(C4):DG(D12) DT(C5):DA(D11) DG(C6):DC(D10) DC(C7):DG(D9) chainA ( 48) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 (373) PHE635 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (381) ARG643 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 (508) LYS770 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (536) THR798 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 (610) PHE872 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 prot.sequence sndmdpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsaRlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglalgvgdgvllkavaqatgrqlesvraeaaekgdvglvaensrstppppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlrlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlahptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrnqadntgkypdiisripkiklpsvtsfildteavawdrekkqiqpFqvlttrkRkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdyldgvgdtldlvvigaylgrgKRagryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislRFprfirvredkqpeqattsaqvaclyrkqs >7ksp_A:N-terminal_nucleophile_aminohydrolases_Ntn_hydrolases; title=CRYSTAL STRUCTURE OF HSAMD9_DBD WITH DNA organism=Homo sapiens DNA sequence DC(D1):DG(C22) DT(D2):DA(C21) DT(D3):DA(C20) DA(D5):DC(C19) DA(D6):DT(C18) DT(D7):DA(C16) DA(D8):DT(C15) DA(D9):DT(C14) DA(D10):DT(C13) DT(D11):DA(C12) DC(D12):DG(C11) DA(D13):DT(C10) DT(D14):DA(C9) DT(D15):DA(C8) DA(D16):DT(C7) DA(D17):DT(C6) DT(D18):DA(C5) DT(D19):DA(C4) DT(D20):DA(C3) DG(D21):DC(C2) DC(D22):DG(C1) chainA (186) LYS354 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ltcvsypfdefsnpyrykldfslqppgnlidpihefkaftntatateedvkmkfsnevfrfasacmnsrtngtihfgvkdphgkivgikvtndtkealinhfnlminkyfedhqvqqakkcireprfvevllplsdrfvievdiipqfsecqydyfqikmqnyiweqskkfslfvrdgtsskditKnkvdfrafkadfktlaesrkaaeekf >7ksp_AB:N-terminal_nucleophile_aminohydrolases_Ntn_hydrolases; title=CRYSTAL STRUCTURE OF HSAMD9_DBD WITH DNA organism=Homo sapiens DNA sequence DC(D1):DG(C22) DT(D2):DA(C21) DT(D3):DA(C20) DA(D5):DC(C19) DA(D6):DT(C18) DT(D7):DA(C16) DA(D8):DT(C15) DA(D9):DT(C14) DA(D10):DT(C13) DT(D11):DA(C12) DC(D12):DG(C11) DA(D13):DT(C10) DT(D14):DA(C9) DT(D15):DA(C8) DA(D16):DT(C7) DA(D17):DT(C6) DT(D18):DA(C5) DT(D19):DA(C4) DT(D20):DA(C3) DG(D21):DC(C2) DC(D22):DG(C1) chainA (186) LYS354 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence ltcvsypfdefsnpyrykldfslqppgnlidpihefkaftntatateedvkmkfsnevfrfasacmnsrtngtihfgvkdphgkivgikvtndtkealinhfnlminkyfedhqvqqakkcireprfvevllplsdrfvievdiipqfsecqydyfqikmqnyiweqskkfslfvrdgtsskditKnkvdfrafkadfktlaesrkaaeekf/ltcvsypfdefsnpyrykldfslqpetgpgnlidpihefkaftntateedvkmkfsnevfrfasacmnsrtngtihfgvkdkphgkivgikvtndtkealinhfnlminkyfedhqvqqakkcireprfvevllsdrfvievdiipqfsecqydyfqikmqnyiweqskkfslfvrdgtsskditKnkvdfrafkadfktlaesrkaaeekf >7ksu_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE MU, DGTP:CT PRODUCT STATE TERNARY COMPLEX, 10 MM MN2+ (4MIN) organism=HOMO SAPIENS DNA sequence DC(T5):DG(P5) DT(T6):DA(P4) DA(T7):DT(P3) DC(T8):DG(P2) DG(T9):DC(P1) chainA (230) ARG387 0 1 5 1 0 (232) PHE389 0 0 2 1 0 (269) LYS438 23 0 0 0 0 (272) GLN441 2 0 0 0 0 (273) ARG442 26 0 0 0 0 (276) ARG445 11 4 0 0 0 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsEgrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqqqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqfeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >7ksv_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE MU, DGTP:CT PRODUCT STATE TERNARY COMPLEX, 10 MM MN2+ (960MIN) organism=? DNA sequence DC(P1):DG(T9) DG(P2):DC(T8) DT(P3):DA(T7) DA(P4):DT(T6) DG(P5):DC(T5) chainA (230) ARG387 0 1 5 1 0 (232) PHE389 0 1 2 0 0 (269) LYS438 0 0 0 0 23 (272) GLN441 0 0 0 0 3 (273) ARG442 0 0 0 0 25 (276) ARG445 0 0 0 4 11 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsEgrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqqqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqfeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >7ksx_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE MU, DGTP:CT PRODUCT STATE TERNARY COMPLEX, 10 MM MG2+ (30MIN) organism=? DNA sequence DC(T5):DG(P5) DT(T6):DA(P4) DA(T7):DT(P3) DC(T8):DG(P2) DG(T9):DC(P1) chainA (230) ARG387 0 1 5 0 0 (232) PHE389 0 0 2 1 0 (269) LYS438 23 0 0 0 0 (272) GLN441 2 0 0 0 0 (273) ARG442 25 0 0 0 0 (276) ARG445 11 4 0 0 0 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsEgrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqqqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqfeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >7ksy_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE MU, DGTP:CT PRODUCT STATE TERNARY COMPLEX, 10 MM MG2+ (960MIN) organism=? DNA sequence DC(T5):DG(P5) DT(T6):DA(P4) DA(T7):DT(P3) DC(T8):DG(P2) DG(T9):DC(P1) chainA (232) ARG387 0 1 5 1 0 (234) PHE389 0 0 2 1 0 (271) LYS438 20 0 0 0 0 (274) GLN441 3 0 0 0 0 (275) ARG442 24 0 0 0 0 (278) ARG445 11 4 0 0 0 prot.sequence wmpayacqrptplthhntglsealeilaeaagfegsEgrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqQqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqafeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsKlfQRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >7kt2_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE MU, DGTP:AT PRODUCT STATE TERNARY COMPLEX, 50 MM MN2+ (225MIN) organism=HOMO SAPIENS DNA sequence DA(T5):DG(P5) DT(T6):DA(P4) DA(T7):DT(P3) DC(T8):DG(P2) DG(T9):DC(P1) chainA (230) ARG387 0 2 5 0 0 (232) PHE389 0 0 2 1 0 (269) LYS438 20 0 0 0 0 (273) ARG442 33 0 0 0 0 (276) ARG445 7 4 0 0 0 prot.sequence mpayacqrptplthhntglsealeilaeaagfegsegrlltfcraasvlkalpspvttlsqlqglphfgehssrvvqellehgvceevervrrseryqtmklftqifgvgvktadrwyreglrtlddlreqpqkltqqqkaglqhhqdlstpvlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllprvmcrlqdqglilyhqfeRsFcifrlpqpgswkavrvdlvvapvsqfpfallgwtgsKlfqRelRrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna >7ktq_ABCDEFGH:Histone-fold; title=NUCLEOSOME FROM A DIMERIC PRC2 BOUND TO A NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DC(J5):DG(I163) DG(J6):DC(I162) DG(J7):DC(I161) DG(J8):DC(I160) DT(J10):DA(I158) DA(J11):DT(I157) DT(J12):DA(I156) DC(J13):DG(I155) DG(J14):DC(I154) DG(J15):DC(I153) DA(J16):DT(I152) DT(J17):DA(I151) DG(J18):DC(I150) DT(J19):DA(I149) DA(J20):DT(I148) DT(J21):DA(I147) DA(J22):DT(I146) DT(J23):DA(I145) DA(J24):DT(I144) DT(J25):DA(I143) DC(J26):DG(I142) DT(J27):DA(I141) DG(J28):DC(I140) DA(J29):DT(I139) DC(J30):DG(I138) DA(J31):DT(I137) DC(J32):DG(I136) DG(J33):DC(I135) DT(J34):DA(I134) DG(J35):DC(I133) DC(J36):DG(I132) DC(J37):DG(I131) DT(J38):DA(I130) DG(J39):DC(I129) DG(J40):DC(I128) DA(J41):DT(I127) DG(J42):DC(I126) DA(J43):DT(I125) DC(J44):DG(I124) DT(J45):DA(I123) DA(J46):DT(I122) DG(J47):DC(I121) DG(J48):DC(I120) DG(J49):DC(I119) DA(J50):DT(I118) DG(J51):DC(I117) DT(J52):DA(I116) DA(J53):DT(I115) DA(J54):DT(I114) DT(J55):DA(I113) DC(J56):DG(I112) DC(J57):DG(I111) DC(J58):DG(I110) DC(J59):DG(I109) DT(J60):DA(I108) DT(J61):DA(I107) DG(J62):DC(I106) DG(J63):DC(I105) DC(J64):DG(I104) DG(J65):DC(I103) DG(J66):DC(I102) DT(J67):DA(I101) DT(J68):DA(I100) DA(J69):DT(I99) DA(J70):DT(I98) DA(J71):DT(I97) DA(J72):DT(I96) DC(J73):DG(I95) DG(J74):DC(I94) DC(J75):DG(I93) DG(J76):DC(I92) DG(J77):DC(I91) DG(J78):DC(I90) DG(J79):DC(I89) DG(J80):DC(I88) DA(J81):DT(I87) DC(J82):DG(I86) DA(J83):DT(I85) DG(J84):DC(I84) DC(J85):DG(I83) DG(J86):DC(I82) DC(J87):DG(I81) DG(J88):DC(I80) DT(J89):DA(I79) DA(J90):DT(I78) DC(J91):DG(I77) DG(J92):DC(I76) DT(J93):DA(I75) DG(J94):DC(I74) DC(J95):DG(I73) DG(J96):DC(I72) DT(J97):DA(I71) DT(J98):DA(I70) DT(J99):DA(I69) DA(J100):DT(I68) DA(J101):DT(I67) DG(J102):DC(I66) DC(J103):DG(I65) DG(J104):DC(I64) DG(J105):DC(I63) DT(J106):DA(I62) DG(J107):DC(I61) DC(J108):DG(I60) DT(J109):DA(I59) DA(J110):DT(I58) DG(J111):DC(I57) DA(J112):DT(I56) DG(J113):DC(I55) DC(J114):DG(I54) DT(J115):DA(I53) DG(J116):DC(I52) DT(J117):DA(I51) DC(J118):DG(I50) DT(J119):DA(I49) DA(J120):DT(I48) DC(J121):DG(I47) DG(J122):DC(I46) DA(J123):DT(I45) DC(J124):DG(I44) DC(J125):DG(I43) DA(J126):DT(I42) DA(J127):DT(I41) DT(J128):DA(I40) DT(J129):DA(I39) DG(J130):DC(I38) DA(J131):DT(I37) DG(J132):DC(I36) DC(J133):DG(I35) DG(J134):DC(I34) DG(J135):DC(I33) DC(J137):DG(I32) DT(J138):DA(I30) DC(J139):DG(I29) DG(J140):DC(I28) DG(J141):DC(I27) DC(J142):DG(I26) DA(J143):DT(I25) DC(J144):DG(I24) DC(J145):DG(I23) DG(J146):DC(I22) DG(J147):DC(I21) DG(J148):DC(I20) DA(J149):DT(I19) DT(J150):DA(I18) DT(J151):DA(I17) DC(J152):DG(I16) DT(J153):DA(I15) DC(J154):DG(I14) DG(J155):DC(I13) DA(J156):DT(I12) DT(J157):DA(I11) DA(J158):DT(I10) DT(J159):DA(I9) DC(J160):DG(I8) DC(J162):DG(I7) DG(J163):DG(I164) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 12) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpaiRrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/dnIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7ktq_D:Histone-fold; title=NUCLEOSOME FROM A DIMERIC PRC2 BOUND TO A NUCLEOSOME organism=? DNA sequence DC(J5):DG(I163) DG(J6):DC(I162) DG(J7):DC(I161) DG(J8):DC(I160) DT(J10):DA(I158) DA(J11):DT(I157) DT(J12):DA(I156) DC(J13):DG(I155) DG(J14):DC(I154) DG(J15):DC(I153) DA(J16):DT(I152) DT(J17):DA(I151) DG(J18):DC(I150) DT(J19):DA(I149) DA(J20):DT(I148) DT(J21):DA(I147) DA(J22):DT(I146) DT(J23):DA(I145) DA(J24):DT(I144) DT(J25):DA(I143) DC(J26):DG(I142) DT(J27):DA(I141) DG(J28):DC(I140) DA(J29):DT(I139) DC(J30):DG(I138) DA(J31):DT(I137) DC(J32):DG(I136) DG(J33):DC(I135) DT(J34):DA(I134) DG(J35):DC(I133) DC(J36):DG(I132) DC(J37):DG(I131) DT(J38):DA(I130) DG(J39):DC(I129) DG(J40):DC(I128) DA(J41):DT(I127) DG(J42):DC(I126) DA(J43):DT(I125) DC(J44):DG(I124) DT(J45):DA(I123) DA(J46):DT(I122) DG(J47):DC(I121) DG(J48):DC(I120) DG(J49):DC(I119) DA(J50):DT(I118) DG(J51):DC(I117) DT(J52):DA(I116) DA(J53):DT(I115) DA(J54):DT(I114) DT(J55):DA(I113) DC(J56):DG(I112) DC(J57):DG(I111) DC(J58):DG(I110) DC(J59):DG(I109) DT(J60):DA(I108) DT(J61):DA(I107) DG(J62):DC(I106) DG(J63):DC(I105) DC(J64):DG(I104) DG(J65):DC(I103) DG(J66):DC(I102) DT(J67):DA(I101) DT(J68):DA(I100) DA(J69):DT(I99) DA(J70):DT(I98) DA(J71):DT(I97) DA(J72):DT(I96) DC(J73):DG(I95) DG(J74):DC(I94) DC(J75):DG(I93) DG(J76):DC(I92) DG(J77):DC(I91) DG(J78):DC(I90) DG(J79):DC(I89) DG(J80):DC(I88) DA(J81):DT(I87) DC(J82):DG(I86) DA(J83):DT(I85) DG(J84):DC(I84) DC(J85):DG(I83) DG(J86):DC(I82) DC(J87):DG(I81) DG(J88):DC(I80) DT(J89):DA(I79) DA(J90):DT(I78) DC(J91):DG(I77) DG(J92):DC(I76) DT(J93):DA(I75) DG(J94):DC(I74) DC(J95):DG(I73) DG(J96):DC(I72) DT(J97):DA(I71) DT(J98):DA(I70) DT(J99):DA(I69) DA(J100):DT(I68) DA(J101):DT(I67) DG(J102):DC(I66) DC(J103):DG(I65) DG(J104):DC(I64) DG(J105):DC(I63) DT(J106):DA(I62) DG(J107):DC(I61) DC(J108):DG(I60) DT(J109):DA(I59) DA(J110):DT(I58) DG(J111):DC(I57) DA(J112):DT(I56) DG(J113):DC(I55) DC(J114):DG(I54) DT(J115):DA(I53) DG(J116):DC(I52) DT(J117):DA(I51) DC(J118):DG(I50) DT(J119):DA(I49) DA(J120):DT(I48) DC(J121):DG(I47) DG(J122):DC(I46) DA(J123):DT(I45) DC(J124):DG(I44) DC(J125):DG(I43) DA(J126):DT(I42) DA(J127):DT(I41) DT(J128):DA(I40) DT(J129):DA(I39) DG(J130):DC(I38) DA(J131):DT(I37) DG(J132):DC(I36) DC(J133):DG(I35) DG(J134):DC(I34) DG(J135):DC(I33) DC(J137):DG(I32) DT(J138):DA(I30) DC(J139):DG(I29) DG(J140):DC(I28) DG(J141):DC(I27) DC(J142):DG(I26) DA(J143):DT(I25) DC(J144):DG(I24) DC(J145):DG(I23) DG(J146):DC(I22) DG(J147):DC(I21) DG(J148):DC(I20) DA(J149):DT(I19) DT(J150):DA(I18) DT(J151):DA(I17) DC(J152):DG(I16) DT(J153):DA(I15) DC(J154):DG(I14) DG(J155):DC(I13) DA(J156):DT(I12) DT(J157):DA(I11) DA(J158):DT(I10) DT(J159):DA(I9) DC(J160):DG(I8) DC(J162):DG(I7) DG(J163):DG(I164) chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7ktq_E:Histone-fold; title=NUCLEOSOME FROM A DIMERIC PRC2 BOUND TO A NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DT(I1):DA(J167) DA(I2):DT(J166) DC(I3):DG(J165) DC(I4):DG(J164) DC(I5):DG(J163) DG(I6):DC(J162) DG(I7):DC(J161) DG(I8):DC(J160) DA(I9):DT(J159) DT(I10):DA(J158) DA(I11):DT(J157) DT(I12):DA(J156) DC(I13):DG(J155) DG(I14):DC(J154) DA(I15):DT(J153) DG(I16):DC(J152) DA(I17):DT(J151) DA(I18):DT(J150) DT(I19):DA(J149) DC(I20):DG(J148) DC(I21):DG(J147) DC(I22):DG(J146) DG(I23):DC(J145) DG(I24):DC(J144) DT(I25):DA(J143) DG(I26):DC(J142) DC(I27):DG(J141) DC(I28):DG(J140) DG(I29):DC(J139) DA(I30):DT(J138) DG(I31):DC(J137) DG(I32):DC(J136) DC(I33):DG(J135) DC(I34):DG(J134) DG(I35):DC(J133) DC(I36):DG(J132) DT(I37):DA(J131) DC(I38):DG(J130) DA(I39):DT(J129) DA(I40):DT(J128) DT(I41):DA(J127) DT(I42):DA(J126) DG(I43):DC(J125) DG(I44):DC(J124) DT(I45):DA(J123) DC(I46):DG(J122) DG(I47):DC(J121) DT(I48):DA(J120) DA(I49):DT(J119) DG(I50):DC(J118) DA(I51):DT(J117) DC(I52):DG(J116) DA(I53):DT(J115) DG(I54):DC(J114) DC(I55):DG(J113) DT(I56):DA(J112) DC(I57):DG(J111) DT(I58):DA(J110) DA(I59):DT(J109) DG(I60):DC(J108) DC(I61):DG(J107) DA(I62):DT(J106) DC(I63):DG(J105) DC(I64):DG(J104) DG(I65):DC(J103) DC(I66):DG(J102) DT(I67):DA(J101) DT(I68):DA(J100) DA(I69):DT(J99) DA(I70):DT(J98) DA(I71):DT(J97) DC(I72):DG(J96) DG(I73):DC(J95) DC(I74):DG(J94) DA(I75):DT(J93) DC(I76):DG(J92) DG(I77):DC(J91) DT(I78):DA(J90) DA(I79):DT(J89) DC(I80):DG(J88) DG(I81):DC(J87) DC(I82):DG(J86) DG(I83):DC(J85) DC(I84):DG(J84) DT(I85):DA(J83) DG(I86):DC(J82) DT(I87):DA(J81) DC(I88):DG(J80) DC(I89):DG(J79) DC(I90):DG(J78) DC(I91):DG(J77) DC(I92):DG(J76) DG(I93):DC(J75) DC(I94):DG(J74) DG(I95):DC(J73) DT(I96):DA(J72) DT(I97):DA(J71) DT(I98):DA(J70) DT(I99):DA(J69) DA(I100):DT(J68) DA(I101):DT(J67) DC(I102):DG(J66) DC(I103):DG(J65) DG(I104):DC(J64) DC(I105):DG(J63) DC(I106):DG(J62) DA(I107):DT(J61) DA(I108):DT(J60) DG(I109):DC(J59) DG(I110):DC(J58) DG(I111):DC(J57) DG(I112):DC(J56) DA(I113):DT(J55) DT(I114):DA(J54) DT(I115):DA(J53) DA(I116):DT(J52) DC(I117):DG(J51) DT(I118):DA(J50) DC(I119):DG(J49) DC(I120):DG(J48) DC(I121):DG(J47) DT(I122):DA(J46) DA(I123):DT(J45) DG(I124):DC(J44) DT(I125):DA(J43) DC(I126):DG(J42) DT(I127):DA(J41) DC(I128):DG(J40) DC(I129):DG(J39) DA(I130):DT(J38) DG(I131):DC(J37) DG(I132):DC(J36) DC(I133):DG(J35) DA(I134):DT(J34) DC(I135):DG(J33) DG(I136):DC(J32) DT(I137):DA(J31) DG(I138):DC(J30) DT(I139):DA(J29) DC(I140):DG(J28) DA(I141):DT(J27) DG(I142):DC(J26) DA(I143):DT(J25) DT(I144):DA(J24) DA(I145):DT(J23) DT(I146):DA(J22) DA(I147):DT(J21) DT(I148):DA(J20) DA(I149):DT(J19) DC(I150):DG(J18) DA(I151):DT(J17) DT(I152):DA(J16) DC(I153):DG(J15) DC(I154):DG(J14) DG(I155):DC(J13) DA(I156):DT(J12) DT(I157):DA(J11) DA(I158):DT(J10) DT(I159):DA(J9) DC(I160):DG(J8) DC(I161):DG(J7) DC(I162):DG(J6) DG(I163):DC(J5) DG(I164):DC(J4) chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge >7ku7_AB:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase;N-terminal_Zn_binding_domain_of_HIV_integrase; title=CRYO-EM STRUCTURE OF ROUS SARCOMA VIRUS CLEAVED SYNAPTIC COMPLEX (CSC) WITH HIV-1 INTEGRASE STRAND TRANSFER INHIBITOR MK-2048. CLUSTER IDENTIFIED BY 3-DIMENSIONAL VARIABILITY ANALYSIS IN CRYOSPARC. organism=ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) DNA sequence DT(I3):DA(J36) DG(I4):DC(J35) DT(I5):DA(J34) DT(I6):DA(J33) DG(I7):DC(J32) DT(I8):DA(J31) DC(I9):DG(J30) DT(I10):DA(J29) DT(I11):DA(J28) DA(I12):DT(J27) DT(I13):DA(J26) DG(I14):DC(J25) DC(I15):DG(J24) DA(I16):DT(J23) DA(I17):DT(J22) DT(I18):DA(J21) chainA ( 51) ASN51 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ALA154 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) GLU157 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) ARG158 0 0 4 9 3 0 0 0 0 0 0 0 0 0 0 0 (161) ARG161 0 2 7 3 1 0 0 0 0 0 0 0 0 0 0 0 (203) GLU203 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 (244) ARG244 0 0 0 8 9 3 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence plreakdlhtalhigpralskacnismqqarevvqtcphcnsapaleagvNprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavlgrpkaiktdngscftskstrewlarwgiahttgipgnsQgqAmvERanRllkdkirvlaegdgfmkriptskqgellakamyalnhfergEntktpiqkhwrptvltegppvkirietgewekgwnvlvwgRgyaavknrdtdkviwvpsrkvkpdi/plqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwaTaiavlgrpkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdkirvlaegdgfmkriptskqgellakamyalnhfergentkTpiQkhWRptVltegppvkirietgewekgwnvlvwgrgyaavknrdtdkviWvpsrkvkpdi >7kuf_A: title=TRANSCRIPTION ACTIVATION SUBCOMPLEX WITH WHIB7 BOUND TO SIGMAAR4-RNAP BETA FLAP TIP CHIMERA AND DNA organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DA(D2):DT(C18) DC(D3):DG(C17) DC(D4):DG(C16) DA(D5):DT(C15) DC(D6):DG(C14) DA(D7):DT(C13) DA(D8):DT(C12) DC(D9):DG(C11) DC(D10):DG(C10) DG(D11):DC(C9) DA(D12):DT(C8) DT(D13):DA(C7) DT(D14):DA(C6) DT(D15):DA(C5) DT(D16):DA(C4) DC(D17):DG(C3) DT(D18):DA(C2) chainA ( 68) ARG83 0 0 0 0 0 0 0 0 0 0 8 3 1 0 0 0 0 ( 70) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 4 9 4 0 0 prot.sequence pvlpchvgdpdlwfadtpaglevaktlcvscpirrqclaaalqraepwgvwggeifdqgsivshkrpRgRprk >7kuf_AB:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=TRANSCRIPTION ACTIVATION SUBCOMPLEX WITH WHIB7 BOUND TO SIGMAAR4-RNAP BETA FLAP TIP CHIMERA AND DNA organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DA(C2):DT(D18) DG(C3):DC(D17) DA(C4):DT(D16) DA(C5):DT(D15) DA(C6):DT(D14) DA(C7):DT(D13) DT(C8):DA(D12) DC(C9):DG(D11) DG(C10):DC(D10) DG(C11):DC(D9) DT(C12):DA(D8) DT(C13):DA(D7) DG(C14):DC(D6) DT(C15):DA(D5) DG(C16):DC(D4) DG(C17):DC(D3) DT(C18):DA(D2) chainA ( 68) ARG83 0 0 0 0 1 3 8 0 0 0 0 0 0 0 0 0 0 ( 70) ARG85 0 0 4 9 4 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 45) THR499 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 ( 46) ARG500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 ( 47) GLU501 0 0 0 0 0 0 0 0 0 0 4 8 11 1 0 0 0 ( 48) ARG502 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 ( 50) ARG504 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 ( 51) GLN505 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 prot.sequence pvlpchvgdpdlwfadtpaglevaktlcvscpirrqclaaalqraepwgvwggeifdqgsivshkrpRgRprk/llqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdgtpeerllraifge >7kui_EF:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase;N-terminal_Zn_binding_domain_of_HIV_integrase; title=CRYO-EM STRUCTURE OF ROUS SARCOMA VIRUS CLEAVED SYNAPTIC COMPLEX (CSC) WITH HIV-1 INTEGRASE STRAND TRANSFER INHIBITOR MK-2048. CIC REGION OF A CLUSTER IDENTIFIED BY 3-DIMENSIONAL VARIABILITY ANALYSIS IN CRYOSPARC. organism=ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) / ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A) DNA sequence DA(L21):DT(K18) DT(L22):DA(K17) DT(L23):DA(K16) DG(L24):DC(K15) DC(L25):DG(K14) DA(L26):DT(K13) DT(L27):DA(K12) DA(L28):DT(K11) DA(L29):DT(K10) DG(L30):DC(K9) DA(L31):DT(K8) DC(L32):DG(K7) DA(L33):DT(K6) DA(L34):DT(K5) DC(L35):DG(K4) chainE (151) GLN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (154) ALA154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (158) ARG158 0 0 0 0 0 0 0 0 0 0 0 6 16 9 1 (161) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 2 5 4 (203) GLU203 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 (244) ARG244 0 0 0 0 0 0 0 0 0 0 4 9 8 0 0 chainF prot.sequence plreakdlhtalhigpralskacnismqqarevvqtcphcnsapaleagvnprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavlgrpkaiktdngscftskstrewlarwgiahttgipgnsQgqAmveRanRllkdkirvlaegdgfmkriptskqgellakamyalnhfergEntktpiqkhwrptvltegppvkirietgewekgwnvlvwgRgyaavknrdtdkviwvpsrkvkpdi/gplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavlgrpkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdkirvlaegdgfmkriptskqgellakamyalnhfergentKtpIqkhWrpTvltegppvkirietgewekgwnvlvwgrgyaavknrdtdkvIwvpsrkvkpdi >7kz0_A:DNA-glycosylase; title=HUMAN MBD4 GLYCOSYLASE DOMAIN BOUND TO DNA CONTAINING SUBSTRATE ANALOG 2'-DEOXY-PSEUDOURIDINE organism=Homo sapiens DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DT(D3):DA(C10) DG(D4):DC(C9) DC(D5):DG(C8) DG(D6):P2U(C7) DC(D7):DG(C6) DG(D8):DC(C5) DC(D9):DG(C4) DT(D10):DA(C3) DG(D11):DC(C2) DG(D12):DC(C1) chainA ( 11) LEU447 0 0 0 0 0 7 0 0 0 0 0 0 ( 12) VAL448 0 0 0 0 0 3 0 0 0 0 0 0 ( 13) GLN449 0 0 0 0 0 11 0 0 0 0 0 0 ( 30) LEU466 0 0 0 0 0 10 0 0 0 0 0 0 ( 31) ASN467 0 0 0 0 4 0 0 0 0 0 0 0 ( 32) ARG468 0 0 0 0 32 4 8 0 0 0 0 0 ( 33) THR469 0 0 0 0 0 4 1 0 0 0 0 0 ( 72) LEU508 0 0 0 0 14 25 0 0 0 0 0 0 ( 75) LEU511 0 0 0 1 6 0 0 0 0 0 0 0 ( 76) ARG512 0 0 0 0 0 1 0 0 0 0 0 0 (104) TYR540 0 0 0 0 0 9 0 0 0 0 0 0 (124) ASP560 0 0 0 0 0 1 0 0 0 0 0 0 (126) LYS562 0 0 0 0 0 11 0 0 0 0 0 0 prot.sequence kwtpprspfnlvqetlfhdpwklliatiflNRTsgkmaipvlwkflekypsaevartadwrdvsellkplgLydLRaktivkfsdeyltkqwkypielhgigkygndsyrifcvnewkqvhpedhklnkyhdwlwenheklsls >7kz1_A:DNA-glycosylase; title=HUMAN MBD4 GLYCOSYLASE DOMAIN BOUND TO DNA CONTAINING AN ABASIC SITE organism=Homo sapiens DNA sequence DG(D1):DC(C12) DC(D2):DG(C11) DT(D3):DA(C10) DG(D4):DC(C9) DC(D5):DG(C8) DG(D6):ORP(C7) DC(D7):DG(C6) DG(D8):DC(C5) DC(D9):DG(C4) DT(D10):DA(C3) DG(D11):DC(C2) DG(D12):DC(C1) chainA ( 31) LEU466 0 0 0 0 0 9 0 0 0 0 0 0 ( 32) ASN467 0 0 0 0 4 0 0 0 0 0 0 0 ( 33) ARG468 0 0 0 0 36 5 11 0 0 0 0 0 ( 34) THR469 0 0 0 0 0 4 0 0 0 0 0 0 ( 38) MET473 0 0 0 0 0 0 3 1 0 0 0 0 ( 73) LEU508 0 0 0 0 12 23 0 0 0 0 0 0 ( 76) LEU511 0 0 0 1 12 0 0 0 0 0 0 0 ( 77) ARG512 0 0 0 0 0 1 0 0 0 0 0 0 (105) TYR540 0 0 0 0 0 15 0 0 0 0 0 0 (125) ASP560 0 0 0 0 0 12 0 0 0 0 0 0 (127) LYS562 0 0 0 0 0 13 0 0 0 0 0 0 prot.sequence kkwtpprspfnlvqetlfhdpwklliatiflNRTSgkMaipvlwkflekypsaevartadwrdvsellkplgLydLRaktivkfsdeyltkqwkypielhgigkygndsyrifcvnewkqvhpedhklnkyhdwlwenhekls >7kzg_A:DNA-glycosylase; title=HUMAN MBD4 GLYCOSYLASE DOMAIN BOUND TO DNA CONTAINING OXACARBENIUM- ION ANALOG 1-AZA-2'-DEOXYRIBOSE organism=Homo sapiens DNA sequence DC(C1):DG(D12) DC(C2):DG(D11) DA(C3):DT(D10) DG(C4):DC(D9) DC(C5):DG(D8) DG(C6):DC(D7) NR1(C7):DG(D6) DG(C8):DC(D5) DC(C9):DG(D4) DA(C10):DT(D3) DG(C11):DC(D2) DC(C12):DG(D1) chainA ( 31) ASN467 0 0 0 0 0 0 0 2 0 0 0 0 ( 32) ARG468 0 0 0 0 0 16 4 17 0 0 0 0 ( 33) THR469 0 0 0 0 0 2 3 0 0 0 0 0 ( 72) LEU508 0 0 0 0 0 0 24 7 0 0 0 0 ( 75) LEU511 0 0 0 0 0 0 0 3 1 0 0 0 ( 76) ARG512 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence kwtpprspfnlvqetlfhdpwklliatiflNRTSgkmaipvlwkflekypsaevartadwrdvsellkplgLydLRaktivkfsdeyltkqwkypielhgigkygndsyrifcvnewkqvhpedhklnkyhdwlwenheklsls >7kzv_U: title=STRUCTURE OF THE HUMAN FANCONI ANAEMIA CORE-UBE2T-ID-DNA COMPLEX IN CLOSED STATE organism=? DNA sequence DG(Z30):DC(Y29) DA(Z31):DT(Y28) DA(Z32):DT(Y27) DC(Z33):DG(Y26) DG(Z34):DC(Y25) DG(Z35):DC(Y24) DA(Z36):DT(Y23) DA(Z37):DT(Y22) DC(Z38):DG(Y21) DG(Z39):DC(Y20) DC(Z40):DG(Y19) DC(Z41):DG(Y18) DT(Z42):DA(Y17) DG(Z43):DC(Y16) DC(Z44):DG(Y15) DT(Z45):DA(Y14) DC(Z46):DG(Y13) DT(Z47):DA(Y12) DG(Z48):DC(Y11) DA(Z49):DT(Y10) DA(Z50):DT(Y9) DC(Z51):DG(Y8) DC(Z52):DG(Y7) DT(Z53):DA(Y6) DG(Z54):DC(Y5) DT(Z55):DA(Y4) DG(Z56):DC(Y3) DC(Z57):DG(Y2) DC(Z58):DG(Y1) chainU (1146) ARG1245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 prot.sequence mdqkilslaaektadklqeflqtlregdltnllqnqavkgkvagallraifkgspcseeagtlrrrkiytcciqlvesgdlqkeivseiigllmleahhfpgpllvelanefisavregslvngkslellpiiltalatkkenllsgeeckkqlintlcsgrwdqqyviqltsmfkdvpltaeevefvvekalsmfskmnlqeipplvyqllvlsskgsrksvlegiiaffsaldkqhneeqspsgelrhvegtiilhivfaikldyelgrelvkhlkvgqqgdsnnnlspfsialllsvtriqrfqdqvldllktsvvksfkdlqllqgskflqnlvphrsyvstmilevvknsvhswdhvtqglvelgfilmdsygpkkvlpslsrmpnqhacklganilletfkihemirqeileqvlnrvvtrasspishfldllsnivmyaplvlqscsskvteafdylsflplqtvqrllkavqpllkvsmsmrdclilvlrkamfanqldarksavagfllllknfkvlynsvanetfcleimdslrrclsqqadvrlmlyegfydvlrrnsqlansvmqtllsqlkqfyepkpdllpplkleaciltqgdkislqepldyllcciqhclawykntvipeafyedlddilesitnrmikseledfeldksadfsqstsigiknnisaflvmgvcevlieynfsissfsknrfedilslfmcykklsdilnekagkaktkmanktsdsllsmkfvsslltalfrdsiqshqeslsvlrssnefmryavnvalqkvqqlketghvsgpdgqnpekifqnlcdltrvllwrytsiptsveesgkkekgksisllcleglqkifsavqqfyqpkiqqflralvsvtqrtafqirqfqrsllnllssqeedfnskealllvtvltslskllepsspqfvqmlswtskickensredalfckslmnllfslhvsykspvillrdlsqdihghlgdidqdvevektnhfaivnlrtaaptvcllvlsqaekvleevdwlitklkgqvpnqpvekaiimqlgtlltffhelvqtalpsgscvdtllkdlckmyttltalvryylqvcqssggipknmeklvklsgshltplcysfisyvqnkskpavvatamarvlRetkpipnlifaieqyekflihlskkskvslmqhmklstsrdfkikgnildmv >7l34_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=HUMAN DNA LIGASE 1 - R641L NICKED DNA COMPLEX organism=Homo sapiens DNA sequence DG(D9):DC(C7) DT(D10):DA(C6) DC(D11):DG(C5) DC(D12):DG(C4) DG(D13):DC(C3) DA(D14):DT(C2) DC(D15):DG(C1) DG(D16):DC(B13) DA(D17):DT(B12) DC(D18):DG(B11) DG(D19):DC(B10) DC(D20):DG(B9) DA(D21):DT(B8) DT(D22):DA(B7) DC(D23):DG(B6) DA(D24):DT(B5) DG(D25):DC(B4) DC(D26):DG(B3) chainA (283) HIS546 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) PHE635 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (507) LYS770 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (535) THR798 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 0 0 (609) PHE872 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 prot.sequence sndpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsaRlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglelgvgdgvllkavaqatgrqlesvraeaaekgdvglvaensrlmlppppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlrlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlaHptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrnqedntgkypdiisripkiklpsvtsfildteavawdrekkqiqpFqvlttlkrkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdyldgvgdtldlvvigaylgrgKRagryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislRFprfirvredkqpeqattsaqvaclyrkq >7l35_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=HUMAN DNA LIGASE 1 - R771W NICKED DNA COMPLEX organism=Homo sapiens DNA sequence DG(B3):DC(D26) DC(B4):DG(D25) DT(B5):DA(D24) DG(B6):DC(D23) DA(B7):DT(D22) DT(B8):DA(D21) DG(B9):DC(D20) DC(B10):DG(D19) DG(B11):DC(D18) DT(B12):DA(D17) DC(B13):DG(D16) DG(C1):DC(D15) DT(C2):DA(D14) DC(C3):DG(D13) DG(C4):DC(D12) DG(C5):DC(D11) DA(C6):DT(D10) DC(C7):DG(D9) chainA ( 46) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 (184) ARG451 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (279) HIS546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (368) PHE635 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (376) ARG643 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 (531) THR798 0 0 0 0 0 0 0 0 0 0 0 1 6 3 0 0 0 0 (605) PHE872 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 prot.sequence sndpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsaRlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglelgvgdgvllkavaqatgrqlesvraeaaekgdvglvaensppppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlRlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlaHptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrnqedntgkypdiisripkiklpsvtsfildteavawdrekkqiqpFqvlttrkRkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdyldgvgdtldlvvigaylgrgkwagryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislRFprfirvredkqpeqattsaqvaclyrkqs >7l4c_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF THE DRM2-CTT DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(C1):DT(B18) DT(C2):DA(B17) DT(C3):DA(B16) DA(C4):DT(B15) DT(C5):DA(B14) DT(C6):DA(B13) DA(C7):DT(B12) DA(C8):DT(B11) DT(C9):DA(B10) C49(C10):DG(B9) DT(C11):DA(B8) DT(C12):DA(B7) DA(C13):DT(B6) DA(C14):DT(B5) DT(C15):DA(B4) DT(C16):DA(B3) DT(C17):DA(B2) DA(C18):DT(B1) chainA ( 39) GLU312 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 ( 40) ASN313 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 41) VAL314 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 74) ARG347 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 76) ARG349 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 (122) LEU395 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (124) CYS397 0 0 0 0 0 0 0 0 0 0 14 5 0 0 0 0 0 0 (161) LYS434 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (162) TRP435 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (199) THR472 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 (203) LYS476 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (207) ASN480 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (314) CYS587 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 (322) ARG595 0 0 0 0 0 0 0 0 0 41 42 0 0 0 0 0 0 0 (325) ARG598 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence epirlpnpmigfgvpnepglithrslpelargppffyyenvaltpkgvwetisrhlfeippefvdskyfcvaarkrgyihnlpinnrfqiqpppkytihdafplskrwwpewdkrtklnciLtCtgsaqltnrirvalepyneepeppkhvqryvidqckKWnlvwvgknkaaplepdemesilgfpknhtrgggmsrTerfKslgnsfqvdtvayhlsvlkpifphginvlslftgigggevalhrlqikmklvvsveiskvnrnilkdfweqtnqtgeliefsdiqhltndtieglmekyggfdlviggspcnnlaggnRvsRvglegdqsslffeycrilevvrarmrgs >7l4f_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF THE DRM2-CAT DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(E2):DT(G17) DA(E3):DT(G16) DA(E4):DT(G15) DG(E5):DC(G14) DG(E6):DC(G13) DA(E7):DT(G12) DT(E8):DA(G11) DG(E9):C49(G10) DA(E10):DT(G9) DG(E11):DC(G8) DG(E12):DC(G7) DA(E13):DT(G6) DG(E14):DC(G5) DG(E15):DC(G4) DA(E16):DT(G3) DA(E17):DT(G2) DT(E18):DA(G1) chainA ( 38) GLU312 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 ( 39) ASN313 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 73) ARG347 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 ( 75) ARG349 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 (123) CYS397 0 0 0 0 0 7 28 0 0 0 0 0 0 0 0 0 0 (160) LYS434 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (161) TRP435 0 0 0 0 0 3 18 0 0 0 0 0 0 0 0 0 0 (198) THR472 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ASN480 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (313) CYS587 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (321) ARG595 0 0 0 0 0 0 76 42 0 0 0 0 0 0 0 0 0 (324) ARG598 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence pirlpnpmigfgvpnepglithrslpelargppffyyenvaltpkgvwetisrhlfeippefvdskyfcvaarkrgyihnlpinnrfqiqpppkytihdafplskrwwpewdkrtklnciltCtgsaqltnrirvalepyneepeppkhvqryvidqckKWnlvwvgknkaaplepdemesilgfpknhtrgggmsrTerfkslgnsfqvdtvayhlsvlkpifphginvlslftgigggevalhrlqikmklvvsveiskvnrnilkdfweqtnqtgeliefsdiqhltndtieglmekyggfdlviggspcnnlaggnRvsRvglegdqsslffeycrilevvrarmr >7l4h_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF THE DRM2-CTG DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DT(B1):DA(C18) DA(B2):DT(C17) DA(B3):DT(C16) DA(B4):DT(C15) DT(B5):DA(C14) DT(B6):DA(C13) DC(B7):DG(C12) DA(B8):DT(C11) DG(B9):C49(C10) DA(B10):DT(C9) DT(B11):DA(C8) DT(B12):DA(C7) DA(B13):DT(C6) DG(B14):DC(C5) DG(B15):DC(C4) DA(B16):DT(C3) DA(B17):DT(C2) DT(B18):DA(C1) chainA ( 38) GLU312 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 ( 39) ASN313 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 40) VAL314 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 73) ARG347 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 75) ARG349 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (121) LEU395 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (123) CYS397 0 0 0 0 0 0 5 28 0 0 0 0 0 0 0 0 0 0 (126) SER400 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (160) LYS434 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (161) TRP435 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (198) THR472 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ASN480 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (313) CYS587 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 (321) ARG595 0 0 0 0 0 0 0 76 45 0 0 0 0 0 0 0 0 0 (324) ARG598 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 prot.sequence pirlpnpmigfgvpnepglithrslpelargppffyyenvaltpkgvwetisrhlfeippefvdskyfcvaarkrgyihnlpinnrfqiqpppkytihdafplskrwwpewdkrtklnciLtCtgSaqltnrirvalepyneepeppkhvqryvidqckKWnlvwvgknkaaplepdemesilgfpknhtrgggmsrTerfkslgnsfqvdtvayhlsvlkpifphginvlslftgigggevalhrlqikmklvvsveiskvnrnilkdfweqtnqtgeliefsdiqhltndtieglmekyggfdlviggspcnnlaggnRvsRvglegdqsslffeycrilevvrarmrgs >7l4k_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF THE DRM2-CCG DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(C1):DT(B18) DT(C2):DA(B17) DT(C3):DA(B16) DC(C4):DG(B15) DC(C5):DG(B14) DT(C6):DA(B13) DA(C7):DT(B12) DA(C8):DT(B11) DT(C9):DA(B10) C49(C10):DG(B9) DC(C11):DG(B8) DG(C12):DC(B7) DA(C13):DT(B6) DA(C14):DT(B5) DT(C15):DA(B4) DT(C16):DA(B3) DT(C17):DA(B2) DA(C18):DT(B1) chainA ( 38) GLU312 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 ( 39) ASN313 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 40) VAL314 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 42) LEU316 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 73) ARG347 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 75) ARG349 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (123) CYS397 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 (160) LYS434 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 (161) TRP435 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (198) THR472 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 (206) ASN480 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (313) CYS587 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 (321) ARG595 0 0 0 0 0 0 0 0 0 41 38 0 0 0 0 0 0 0 (324) ARG598 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 prot.sequence pirlpnpmigfgvpnepglithrslpelargppffyyenvaLtpkgvwetisrhlfeippefvdskyfcvaarkrgyihnlpinnrfqiqpppkytihdafplskrwwpewdkrtklnciltCtgsaqltnrirvalepyneepeppkhvqryvidqckKWnlvwvgknkaaplepdemesilgfpknhtrgggmsrTerfkslgnsfqvdtvayhlsvlkpifphginvlslftgigggevalhrlqikmklvvsveiskvnrnilkdfweqtnqtgeliefsdiqhltndtieglmekyggfdlviggspcnnlaggNRvsRvglegdqsslffeycrilevvrarmrgs >7l4m_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF THE DRM2-CCT DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DT(C1):DA(D18) DA(C2):DT(D17) DA(C3):DT(D16) DA(C4):DT(D15) DG(C5):DC(D14) DG(C6):DC(D13) DA(C7):DT(D12) DG(C8):DC(D11) DG(C9):C49(D10) DA(C10):DT(D9) DG(C11):DC(D8) DG(C12):DC(D7) DA(C13):DT(D6) DG(C14):DC(D5) DG(C15):DC(D4) DA(C16):DT(D3) DA(C17):DT(D2) DT(C18):DA(D1) chainB ( 38) GLU312 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 ( 39) ASN313 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 73) ARG347 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 75) ARG349 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (121) LEU395 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (123) CYS397 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 (161) TRP435 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (198) THR472 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ASN480 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (313) CYS587 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (321) ARG595 0 0 0 0 0 0 0 80 48 0 0 0 0 0 0 0 0 0 (324) ARG598 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence pirlpnpmigfgvpnepglithrslpelargppffyyenvaltpkgvwetisrhlfeippefvdskyfcvaarkrgyihnlpinnrfqiqpppkytihdafplskrwwpewdkrtklnciLtCtgsaqltnrirvalepyneepeppkhvqryvidqckkWnlvwvgknkaaplepdemesilgfpknhtrgggmsrTerfkslgnsfqvdtvayhlsvlkpifphginvlslftgigggevalhrlqikmklvvsveiskvnrnilkdfweqtnqtgeliefsdiqhltndtieglmekyggfdlviggspcnnlaggnRvsRvglegdqsslffeycrilevvrarmr >7l4n_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF THE DRM2 (C397R)-CCG DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(C1):DT(B18) DT(C2):DA(B17) DT(C3):DA(B16) DC(C4):DG(B15) DC(C5):DG(B14) DT(C6):DA(B13) DA(C7):DT(B12) DA(C8):DT(B11) DT(C9):DA(B10) C49(C10):DG(B9) DC(C11):DG(B8) DG(C12):DC(B7) DA(C13):DT(B6) DA(C14):DT(B5) DT(C15):DA(B4) DT(C16):DA(B3) DT(C17):DA(B2) DA(C18):DT(B1) chainA ( 38) GLU312 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 ( 39) ASN313 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 40) VAL314 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 73) ARG347 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 75) ARG349 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (123) ARG397 0 0 0 0 0 0 0 0 0 0 11 20 4 1 0 0 0 0 (160) LYS434 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (161) TRP435 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (198) THR472 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 (206) ASN480 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (313) CYS587 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 (321) ARG595 0 0 0 0 0 0 0 0 0 42 41 0 0 0 0 0 0 0 (324) ARG598 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 prot.sequence pirlpnpmigfgvpnepglithrslpelargppffyyenvaltpkgvwetisrhlfeippefvdskyfcvaarkrgyihnlpinnrfqiqpppkytihdafplskrwwpewdkrtklnciltRtgsaqltnrirvalepyneepeppkhvqryvidqckKWnlvwvgknkaaplepdemesilgfpknhtrgggmsrTerfkslgnsfqvdtvayhlsvlkpifphginvlslftgigggevalhrlqikmklvvsveiskvnrnilkdfweqtnqtgeliefsdiqhltndtieglmekyggfdlviggspcnnlaggnRvsRvglegdqsslffeycrilevvrarmrgs >7l4v_A:Leucine_zipper_domain; title=C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA BOUND TO DNA WITH CONSENSUS RECOGNITION WITH GT MISMATCH organism=Homo sapiens DNA sequence DA(D102):DT(C16) DT(D103):DA(C15) DA(D104):DT(C14) DT(D105):DA(C13) DT(D106):DA(C12) DG(D107):DC(C11) DC(D108):DG(C10) DG(D109):DT(C9) DC(D110):DG(C8) DA(D111):DT(C7) DA(D112):DT(C6) DT(D113):DA(C5) DC(D114):DG(C4) DC(D115):DG(C3) DT(D116):DA(C2) chainA ( 10) ARG277 0 0 0 0 0 0 0 0 0 0 0 2 9 8 0 ( 11) ARG278 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 1 7 6 3 0 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 3 6 3 0 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 22) ARG289 0 0 0 0 0 0 20 14 6 2 0 0 0 0 0 prot.sequence mkhsdeykiRRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkq >7l4v_AB:Leucine_zipper_domain; title=C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA BOUND TO DNA WITH CONSENSUS RECOGNITION WITH GT MISMATCH organism=Homo sapiens DNA sequence DA(C2):DT(D116) DG(C3):DC(D115) DG(C4):DC(D114) DA(C5):DT(D113) DT(C6):DA(D112) DT(C7):DA(D111) DG(C8):DC(D110) DT(C9):DG(D109) DG(C10):DC(D108) DC(C11):DG(D107) DA(C12):DT(D106) DA(C13):DT(D105) DT(C14):DA(D104) DA(C15):DT(D103) DT(C16):DA(D102) chainA ( 10) ARG277 0 8 9 2 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG278 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 ( 14) ASN281 0 0 0 3 6 7 1 0 0 0 0 0 0 0 0 ( 17) ALA284 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 18) VAL285 0 0 0 0 3 6 3 0 0 0 0 0 0 0 0 ( 21) SER288 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 22) ARG289 0 0 0 0 0 2 6 14 20 0 0 0 0 0 0 chainB ( 11) ARG278 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 ( 14) ASN281 0 0 0 0 0 0 0 0 0 0 6 8 4 0 0 ( 15) ASN282 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 17) ALA284 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 ( 18) VAL285 0 0 0 0 0 0 0 0 0 2 4 2 0 0 0 ( 21) SER288 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 ( 22) ARG289 0 0 0 0 0 0 0 4 12 6 4 0 0 0 0 prot.sequence mkhsdeykiRRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkq/mkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlpe >7l4x_B: title=YTH DOMAIN OF HUMAN YTHDC1 WITH DSDNA COMPRISING SINGLE N6MA JOINED BY TWO SIX-BP DNA DUPLEXES IN P3221 CRYSTAL organism=Homo sapiens DNA sequence DC(E1) DA(E2) DG(E3) DC(E4) DT(E5) DG(E6) DG(E8) DT(E9) DC(E10) DG(E11) DA(E12) DC(E13) chainB ( 37) LEU380 0 0 0 0 0 3 0 0 0 0 0 0 ( 38) PRO381 0 0 0 0 0 2 0 0 0 0 0 0 ( 95) MET438 0 0 0 0 0 14 0 0 0 0 0 0 (130) ILE473 0 0 0 0 0 0 1 1 0 0 0 0 (132) ARG475 0 0 0 0 0 0 22 0 0 0 0 0 prot.sequence gtsklkyvlqdarffliksnnhenvslakakgvwstLPvnekklnlafrsarsvilifsvresgkfqgfarlsseshhggspihwvlpagmsakMlggvfkidwicrrelpftksahltnpwnehkpvkIgRdgqeielecgtqlcllfppdesidlyqvihkmr >7l4y_B: title=YTH DOMAIN OF HUMAN YTHDC1 WITH DSDNA COMPRISING SINGLE N6MA JOINED BY TWO SIX-BP DNA DUPLEXES IN P212121 CRYSTAL organism=HOMO SAPIENS DNA sequence DC(E1):DG(F6) DA(E2):DT(F5) DG(E3):DC(F4) DC(E4):DG(F3) DT(E5):DA(F2) DG(E6):DC(F1) chainB ( 36) LEU380 0 0 0 0 0 11 ( 37) PRO381 0 0 0 0 0 22 ( 38) VAL382 0 0 0 0 5 6 ( 94) MET438 0 0 0 0 0 8 prot.sequence tsklkyvlqdarffliksnnhenvslakakgvwstLPVnekklnlafrsarsvilifsvresgkfqgfarlsseshhggspihwvlpagmsakMlggvfkidwicrrelpftksahltnpwnehkpvkigrdgqeielecgtqlcllfppdesidlyqvihkmr >7l69_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN POLYMERASE ETA COMPLEXED WITH SYN N7- BENZYLGUANINE organism=Homo sapiens DNA sequence DC(T5):DG(P8) DT(T6):DA(P7) DC(T7):DG(P6) DA(T8):DT(P5) DC(T9):DG(P4) DA(T10):DT(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (377) ARG382 0 0 0 0 0 6 6 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7lbm_AMOPTW:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF THE HUMAN MEDIATOR-BOUND TRANSCRIPTION PRE-INITIATION COMPLEX organism=? DNA sequence DG(V30):DC(U64) DG(V31):DC(U63) DC(V32):DG(U62) DT(V33):DA(U61) DC(V34):DG(U60) DG(V35):DC(U59) DA(V36):DT(U58) DG(V37):DC(U57) DT(V38):DA(U56) DG(V39):DC(U55) DT(V40):DA(U54) DT(V41):DA(U53) DC(V42):DG(U52) DG(V43):DC(U51) DA(V44):DT(U50) DT(V45):DA(U49) DC(V46):DG(U48) DG(V47):DC(U47) DC(V48):DG(U46) DG(V49):DC(U45) DA(V50):DT(U44) DC(V51):DG(U43) DT(V52):DA(U42) DG(V53):DC(U41) DA(V54):DT(U40) DG(V55):DC(U39) DG(V56):DC(U38) DA(V57):DT(U37) DC(V58):DG(U36) DG(V59):DC(U35) DA(V60):DT(U34) DA(V61):DT(U33) DC(V62):DG(U32) DG(V63):DC(U31) DC(V64):DG(U30) DG(V65):DC(U29) DC(V66):DG(U28) DC(V67):DG(U27) DC(V68):DG(U26) DC(V69):DG(U25) DC(V70):DG(U24) DA(V71):DT(U23) DC(V72):DG(U22) DC(V73):DG(U21) DC(V74):DG(U20) DC(V75):DG(U19) DC(V76):DG(U18) DT(V77):DA(U17) DT(V78):DA(U16) DT(V79):DA(U15) DT(V80):DA(U14) DA(V81):DT(U13) DT(V82):DA(U12) DA(V83):DT(U11) DG(V84):DC(U10) DG(V85):DC(U9) DC(V86):DG(U8) DG(V87):DC(U7) DC(V88):DG(U6) DC(V89):DG(U5) DC(V90):DG(U4) DT(V91):DA(U3) DT(V92):DA(U2) DC(V93):DG(U1) chainA chainM ( 83) LYS346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO chainP ( 15) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ALA198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (137) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (151) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (153) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (159) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainW (384) LYS528 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicegggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitrhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmesptspsysptspsyysptspsy/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqveeeplnseddvsdeegqelfdtenvvvcqydkihrsKnkwkfhlkdgimnlngrdyifskaigdaew/ldalprvtcpnhpdailvedyragdmicpecglvvgdrvidvgsewrtrtmsssdrammnafkeittmadrinlprnivdrtNnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/tpasessgivpqlqNiVstvnlgckldlktialrarnaeynpkrFAavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/qmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrnsevsfevkqemieelqkrcihleypllaeydfrlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktKkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvla >7lbw_AB:HMG-box; title=CRYSTAL STRUCTURE OF TFAM (MITOCHONDRIAL TRANSCRIPTION FACTOR A) BRIDGING TWO NON-SEQUENCE SPECIFIC DNA SUBSTRATES organism=Homo sapiens DNA sequence DT(c1):DA(e44) DA(c2):DT(e43) DG(c3):DC(e42) DC(c4):DG(e41) DC(c5):DG(e40) DT(c6):DA(e39) DT(c7):DA(e38) DT(c8):DA(e37) DC(c9):DG(e36) DT(c10):DA(e35) DA(c11):DT(e34) DT(c12):DA(e33) DT(c13):DA(e32) DA(c14):DT(e31) DG(c15):DC(e30) DC(c16):DG(e29) DT(c17):DA(e28) DC(c18):DG(e27) DT(c19):DA(e26) DT(c20):DA(e25) DA(c21):DT(e24) DG(c22):DC(e23) DC(c23):DG(e22) DT(c24):DA(e21) DA(c25):DT(e20) DA(c26):DT(e19) DG(c27):DC(e18) DA(c28):DT(e17) DG(c29):DC(e16) DC(c30):DG(e15) DT(c31):DA(e14) DA(c32):DT(e13) DA(c33):DT(e12) DT(c34):DA(e11) DA(c35):DT(e10) DG(c36):DC(e9) DA(c37):DT(e8) DA(c38):DT(e7) DA(c39):DT(e6) DG(c40):DC(e5) DG(c41):DC(e4) DC(c42):DG(e3) DT(c43):DA(e2) DA(c44):DT(e1) chainA ( 12) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LEU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LYS62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ILE81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) MET143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) LYS147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG157 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) TYR162 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) ASN163 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) VAL166 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) PHE170 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) PRO178 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) GLN179 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) LEU182 0 0 0 0 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) THR234 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 12) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LEU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ILE81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) MET143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) LYS147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 (119) TYR162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 0 (120) ASN163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 (123) VAL166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (127) PHE170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (135) PRO178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 (136) GLN179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 (139) LEU182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 prot.sequence svlascpkkpvSsYLrfSKeqLpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkaMtkkKeltllgkpkRprsaYNvyVaerFqeakgdsPQekLktvkenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllrrTik/svlascpkkpvSsYLrfSkeqLpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkaMtkkKeltllgkpkRprsaYNvyVaerFqeakgdsPQekLktvkenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllrr >7lbw_B:HMG-box; title=CRYSTAL STRUCTURE OF TFAM (MITOCHONDRIAL TRANSCRIPTION FACTOR A) BRIDGING TWO NON-SEQUENCE SPECIFIC DNA SUBSTRATES organism=Homo sapiens DNA sequence DT(c1):DA(e44) DA(c2):DT(e43) DG(c3):DC(e42) DC(c4):DG(e41) DC(c5):DG(e40) DT(c6):DA(e39) DT(c7):DA(e38) DT(c8):DA(e37) DC(c9):DG(e36) DT(c10):DA(e35) DA(c11):DT(e34) DT(c12):DA(e33) DT(c13):DA(e32) DA(c14):DT(e31) DG(c15):DC(e30) DC(c16):DG(e29) DT(c17):DA(e28) DC(c18):DG(e27) DT(c19):DA(e26) DT(c20):DA(e25) DA(c21):DT(e24) DG(c22):DC(e23) DC(c23):DG(e22) DT(c24):DA(e21) DA(c25):DT(e20) DA(c26):DT(e19) DG(c27):DC(e18) DA(c28):DT(e17) DG(c29):DC(e16) DC(c30):DG(e15) DT(c31):DA(e14) DA(c32):DT(e13) DA(c33):DT(e12) DT(c34):DA(e11) DA(c35):DT(e10) DG(c36):DC(e9) DA(c37):DT(e8) DA(c38):DT(e7) DA(c39):DT(e6) DG(c40):DC(e5) DG(c41):DC(e4) DC(c42):DG(e3) DT(c43):DA(e2) DA(c44):DT(e1) chainB ( 12) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LEU58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ILE81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) MET143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) LYS147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 (119) TYR162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 0 (120) ASN163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 (123) VAL166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (127) PHE170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (135) PRO178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 (136) GLN179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 (139) LEU182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 prot.sequence svlascpkkpvSsYLrfSkeqLpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkaMtkkKeltllgkpkRprsaYNvyVaerFqeakgdsPQekLktvkenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllrr >7lbx_B:HMG-box; title=CRYSTAL STRUCTURE OF TFAM (MITOCHONDRIAL TRANSCRIPTION FACTOR A) IN COMPLEX WITH LSP organism=Homo sapiens DNA sequence DT(E1):DA(F22) DT(E2):DA(F21) DA(E3):DT(F20) DA(E4):DT(F19) DC(E5):DG(F18) DA(E6):DT(F17) DG(E7):DC(F16) DT(E8):DA(F15) DC(E9):DG(F14) DA(E10):DT(F13) DC(E11):DG(F12) DC(E12):DG(F11) DC(E13):DG(F10) DC(E14):DG(F9) DC(E15):DG(F8) DC(E16):DG(F7) DA(E17):DT(F6) DA(E18):DT(F5) DC(E19):DG(F4) DT(E20):DA(F3) DA(E21):DT(F2) DA(E22):DT(F1) chainB ( 9) LYS52 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) SER55 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR57 0 0 0 8 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LEU58 0 0 0 15 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) SER61 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU65 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR77 0 0 0 0 0 2 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR78 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ILE81 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) MET143 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (104) LYS147 0 0 0 0 0 0 0 0 7 2 1 0 0 0 0 0 0 0 0 0 0 0 (114) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (119) TYR162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 (120) ASN163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 (123) VAL166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (127) PHE170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (135) PRO178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 (136) GLN179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 (139) LEU182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 2 0 0 0 0 0 (143) LYS186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 prot.sequence svlascpkKpvSsYLrfSkeqLpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkaMtkkKeltllgkpkRprsaYNvyVaerFqeakgdsPQekLktvKenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllr >7lcc_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=HELITRON TRANSPOSASE BOUND TO LTS organism=SYNTHETIC CONSTRUCT DNA sequence DG(B16) DA(B15) DA(B14) DA(B13) DA(B12) DT(B11) DA(B10) DA(B9) DT(B8) DA(B7) DT(B6) DA(B5) DT(B1) DC(B2) DC(B3) DT(B4):DA(B5) chainA (335) GLN461 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (367) LEU493 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 (368) PRO494 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 (376) ARG502 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 (383) GLN509 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (739) PHE865 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 (740) THR866 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 (742) SER868 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 (980) HIS1106 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (987) ILE1113 0 0 0 0 0 0 0 0 15 0 3 0 0 0 0 0 (996) ARG1122 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (1020) MET1146 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 (1059) SER1185 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 3 (1060) ILE1186 0 0 0 0 0 0 0 0 0 0 0 3 0 0 8 13 (1160) LYS1286 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (1210) SER1336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (1229) ARG1355 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 (1230) ASN1356 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (1277) SER1403 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 (1284) LYS1410 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (1301) ASN1427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (1320) PHE1446 0 0 0 0 0 0 0 0 0 0 0 0 0 20 3 0 (1321) ALA1447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence edailehscggmtvrcefclslnfsdekpsdgkftrccskgkvcpndihfpdypaylkrlmtnedsdsknfmenirsinssfafasmganiaspsgygpycfrihgqvyhrtgtlhpsdgvsrkfaqlyildtaeatskrlampenqgcserlmininnlmheineltksykmlhevekeaqseaaakgiaptevtmaikydrnsdpgrynsprvtevavifrnedgeppferdllihckpdpnnpnatkmkqisilfptldamtypilfphgekgwgtdialrrvtqmqyygfhlsvrdtfnpilnagkltqqfivdsyskmeanrinfikanQsklrvekysglmdylksrsendnvpigkmiiLPssfegspRnmqqryQdamaivtkygkpdlfitmtcnpkwaditnnlqrwqkvenrpdlvarvfniklnallndickfhlfgkviakihviefqkrglphahillildsesklrseddidrivkaeipdedqcprlfqivksnmvhgpcgiqnpnspcmengkcskgypkefqnatignidgypkykrrsgstmsignkvvdntwivpynpylclkynchinvevcasiksvkylfkyiykghdcaniqisekniinhdevqdfidsryvsapeavwrlfamrmhdqshaitrlaihlpndqnlyfhtddfaevldrakrhnstlmawfllnredsdarnyyyweipqhyvfnnslwtkrrkggnkvlgrlFTvSfreperyylrllllhvkgaisfedlrtvggvtydtfheaakhrglllddtiwkdtiddaiilnmpkqlrqlfayicvfgcpsaadklwdenkshfiedfcwklhrregacvncemhalneiqevftlhgmkcshfklpdypllmnantcdqlyeqqqaevlinslndeqlaafqtitsaiedqtvhpkcffldgpggsgqtylykvlthyirgrggtvlptastgiaanlllggrtfHsqyklpIplnetsisRldiksevaktikkaqlliidectMasshainaidrllreimnlnvafggkvlllggdfrqclSIvphamrsaivqtslkycnvwgcfrklslktnmrsedsaysewlvklgdgkldssfhlgmdiieiphemicngsiieatfgnsisidnikniskrailcpKnehvqklneeildildgdfhtylsddsidstddaekenfpieflnsitpSgmpchklklkvgaiimllRNlnskwglcngtrfiikrlrpniieaevltgsaegevvlipridlspSdtglpfKlirrqfpvmpafamtiNksqgqtldrvgiflpepvFAhgqlyvafsrvrracdvkvkvvntssqgklvkhsesvftlnvvyreil >7lcd_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN POLYMERASE ETA COMPLEXED WITH SYN N7- ACETOPHENONEGUANINE organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DT(P3):DA(T10) DG(P4):DC(T9) DT(P5):DA(T8) DG(P6):DC(T7) DA(P7):DT(T6) DG(P8):DC(T5) chainA (373) LEU378 0 0 0 0 1 1 0 0 (377) ARG382 0 6 6 0 0 0 0 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7lh9_C:Tudor/PWWP/MBT; title=CRYSTAL STRUCTURE OF BRPF2 PWWP DOMAIN IN COMPLEX WITH DNA organism=? DNA sequence DG(I1):DC(J12) DC(I2):DG(J11) DC(I3):DG(J10) DA(I4):DT(J9) DT(I5):DA(J8) DC(I6):DG(J7) DG(I7):DC(J6) DA(I8):DT(J5) DT(I9):DA(J4) DG(I10):DC(J3) DG(I11):DC(J2) DC(I12):DG(J1) chainC ( 84) ASN1025 0 0 0 0 3 0 0 0 0 0 0 0 ( 86) SER1027 0 0 0 0 4 2 0 0 0 0 0 0 prot.sequence plkvvwakcsgypsypaliidpkpappldvlkigehmqtksdeklflvlffdnkrswqwlpkskmvplgidetidklkmmegrNsSirkavriafdramnhlsrvhg >7lhz_AB:Type_II_DNA_topoisomerase; title=K. PNEUMONIAE TOPOISOMERASE IV (PARE-PARC) IN COMPLEX WITH DNA AND (3S)-10-[(3R)-3-(1-AMINOCYCLOPROPYL)PYRROLIDIN-1-YL]-9-FLUORO-3- METHYL-5-OXO-2,3-DIHYDRO-5H-[1,4]OXAZINO[2,3,4-IJ]QUINOLINE-6- CARBOXYLIC ACID (COMPOUND 25) organism=? DNA sequence DC(H204):DG(F123) DG(H205):DC(F122) DT(H206):DA(F121) DT(H207):DA(F120) DG(H208):DC(F119) DT(H209):DA(F118) DA(H210):DT(F117) DT(H211):DA(F116) DG(G312):DC(F115) DA(G313):DT(F114) DT(G314):DA(F113) DC(G315):DG(F112) DA(G316):DT(E11) DT(G317):DA(E10) DA(G318):DT(E9) DC(G319):DG(E8) DA(G320):DT(E7) DA(G321):DT(E6) DC(G322):DG(E5) DG(G323):DC(E4) chainA ( 44) LYS444 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 (252) ARG1029 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (302) ASP1079 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (303) SER1080 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (304) ALA1081 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (395) ILE1172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 13 0 0 0 (549) ARG1326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 1 0 chainB ( 46) LYS444 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 (271) ASP1079 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (272) SER1080 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (273) ALA1081 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 (364) ILE1172 0 0 0 18 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kladctaqdlnrtelflvegdsaggsakqardreyqaimplkgKilntwevssdevlasqevhdisvaigidpdsddlsqlrygkiciladadsdglhiatllcalfvrhfrtlvkeghvyvalpplyridlgkevyyalteeektgvleqlkrkkgkpnvqrfkglgemnpmqlrettldpntrrlvqlvisdedeqqttaimdmllakkrsedrrnwlqekgdmaderlalheftenaylnysmyvimdRalpfigdglkpvqrrivyamselglnasakfkksartvgdvlgkyhphgDSAcyeamvlmaqpfsyryplvdgqgnwgapddpksfaamrytesrlskyaelllselgqgtvdwvpnfdgtlqepkmlparlpnillngttgIavgmatdipphnlrevakaaitlieqpkttldelldivqgpdfpteaeiitsraeirkiyqngrgsvrmravwskedgavvitalphqvsgakvleqiaaqmrnkklpmvddlrdesdhenptrlvivprsnrvdmeqvmnhlfattdleksyRinlnmigldgrpavknlleilsewlvfrrdtvrrrlnhrlekvlkrlhilegllvaflnidevieiirtedepkpalmsrfgisetqaeailelklrhlakleemkirgeqselekerdqlqailaserkmnnllkkelqadadafgddrrsplher/pgkladctaqdlnrtelflvegdsaggsakqardreyqaimplkgKilntwevssdevlasqevhdisvaigidpdsddlsqlrygkiciladadsdglhiatllcalfvrhfrtlvkeghvyvalpplyqrfkglgemnpmqlrettldpntrrlvqlvisdedeqqttaimdmllakkrsedrrnwlqekgsdmaerlalheftenaylnysmyvimdralpfigdglkpvqrrivyamselglnasakfkksartvgdvlgkyhphgDSAcyeamvlmaqpfsyryplvdgqgnwgapddpksfaamrytesrlskyaelllselgqgtvdwvpnfdgtlqepkmlparlpnillngttgIavgmatdipphnlrevakaaitlieqpkttldelldivqgpdfpteaeiitsraeirkiyqngrgsvrmravlphqvsgakvleqiaaqmrneqvmnhlfattdleksyrinlnmigldgrpavknlleilsewlvfrrdtvrrrlnhrlekvlkrlhilegllvaflnidevieiirtedepkpalmsrfgisetqaeailelklrhlakleemkirgeqselekerdqlqailaserkmnnllkkelqadadafgddrrsplher >7lhz_D:Type_II_DNA_topoisomerase; title=K. PNEUMONIAE TOPOISOMERASE IV (PARE-PARC) IN COMPLEX WITH DNA AND (3S)-10-[(3R)-3-(1-AMINOCYCLOPROPYL)PYRROLIDIN-1-YL]-9-FLUORO-3- METHYL-5-OXO-2,3-DIHYDRO-5H-[1,4]OXAZINO[2,3,4-IJ]QUINOLINE-6- CARBOXYLIC ACID (COMPOUND 25) organism=? DNA sequence DA(K516):DT(J611) DT(K517):DA(J610) DA(K518):DT(J609) DC(K519):DG(J608) DA(K520):DT(J607) DA(K521):DT(J606) chainD ( 46) LYS444 5 5 0 0 0 0 (231) ARG1029 0 0 1 0 0 0 (283) ALA1081 1 2 0 0 0 0 (286) GLU1084 0 0 2 0 0 0 (374) ILE1172 0 0 0 14 18 0 prot.sequence pgkladctaqdlnrtelflvegdsaggsakqardreyqaimplkgKilntwevssdevlasqevhdisvaigidpdsddlsqlrygkiciladadsdglhiatllcalfvrhfrtlvkeghvyvalpplyriyalteeektgvqrfkglgemnpmqlrettldpntrrlvqlvisdedeqqttaimdmllakkrsedrrnwlqekgderlalheftenaylnysmyvimdRalpfigdglkpvqrrivyamselglnasakfkksartvgdvlgkyhphgdsAcyEamvlmaqpfsyryplvdgqgnwgapddpksfaamrytesrlskyaelllselgqgtvdwvpnfdgtlqepkmlparlpnillngttgIavgmatdipphnlrevakaaitlieqpkttldelldivqgpdfpteaeiitsraeirkiyqngrgsvrmravwskedgavvitalphqvsgakvleqiaaqmrnkklpmvesdhenptrlvivprsnrvdmeqvmnhlfattdleksyrinlnmigldgrpavknlleilsewlvfrrdtvrrrlnhrlekvlkrlhilegllvaflnidevieiirtedepkpalmsrfgisetqaeailelklrhlakleemkirgeqselekerdqlqailaserkmnnllkkelqadadafgddrrspl >7lma_A: title=TETRAHYMENA TELOMERASE T3D2 STRUCTURE AT 3.3 ANGSTROM organism=TETRAHYMENA THERMOPHILA DNA sequence DG(C17) DG(C18) DG(C19) DT(C20) DT(C21) DG(C22) DG(C23) DG(C24) DG(C25) DT(C26) DT(C27) DG(C28) DG(C29) DG(C30) chainA (339) PHE414 0 0 0 0 0 0 0 0 0 27 0 0 0 0 (484) LEU559 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (488) GLN563 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (828) ASN926 0 0 0 0 0 0 0 0 0 0 5 0 0 0 prot.sequence kqmltrkedlltvlkqisalkyvsnlyefllatekivqtseldtqfqefltttiiaseqnlvenykqkynqpnfsqltikqviddsiillgnkqnyvqqigtttigfyveyeninlsrqtlyssnfrnllnifgeedfkyflidflvftkveqngylqvagvclnqyfsenqyiypeiqrsqifycnhmgrepgvfkssffnysepqtiikktllkeyqsknfscqeerdlfleftekivqnfhninfnyllkkfcklpenyqslksqvkqivqsenkanqqscenlfnslydteisykqitnflrqiiqncvpnqllgkknfkvfleklyefvqmkrFenqkvldyicfmdvfdvewfvdlknqkftqkrkyisdkrkilgdlivfiinkivipvlrynfyitekhkegsqifyyrkpiwklvskltivkleeenlekveeklipedsfqkypqgklriipkkgsfrpimtflrkdkqknikLnlnQilmdsqlvfrnlkdmlgqkigysvfdnkqisekfaqfiekwknkgrpqlyyvtldikkcydsidqmkllnffnqsdliqdtyfinkyllfqrnkrpllqimdninfpyyfnlkerqiayslyddddqilqkgfkeiqsddrpfivinqdkprcitkdiihnhlkhisqynvisfnkvkfrqkrgipqglnisgvlcsfyfgkleeeytqflknaeqvngsinllmrltddylfisdsqqnalnlivqlqncannngfmfndqkittnfqfpqedynlehfkisvqnecqwigksidmntleiksiqkqtqqeinqtinvaisiknlksqlknklrslflNqlidyfnpninsfeglcrqlyhhskatvmkfypfmtklfqidlkkskqysvqygkentnenflkdilyytvedvckilcylqfedeinsnikeifknlyswimwdiivsylkkkkqfkgylnkllqkirksrffylkegckslqlilsqqkyqlnkkeleaiefidlnnliqdiktlipkisak >7lma_AD:Nucleic_acid-binding_proteins; title=TETRAHYMENA TELOMERASE T3D2 STRUCTURE AT 3.3 ANGSTROM organism=TETRAHYMENA THERMOPHILA DNA sequence DG(C17) DG(C18) DG(C19) DT(C20) DT(C21) DG(C22) DG(C23) DG(C24) DG(C25) DT(C26) DT(C27) DG(C28) DG(C29) DG(C30) chainA (339) PHE414 0 0 0 0 0 0 0 0 0 27 0 0 0 0 (484) LEU559 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (488) GLN563 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (828) ASN926 0 0 0 0 0 0 0 0 0 0 5 0 0 0 chainD ( 76) MET586 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG588 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) MET601 0 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) PHE603 32 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ASP604 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN656 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS660 0 5 8 0 0 0 0 0 0 0 0 0 0 0 (152) PHE662 0 0 35 0 0 0 0 0 0 0 0 0 0 0 (157) GLU667 0 0 10 0 0 0 0 0 0 0 0 0 0 0 (159) ALA669 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (161) LYS671 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU673 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kqmltrkedlltvlkqisalkyvsnlyefllatekivqtseldtqfqefltttiiaseqnlvenykqkynqpnfsqltikqviddsiillgnkqnyvqqigtttigfyveyeninlsrqtlyssnfrnllnifgeedfkyflidflvftkveqngylqvagvclnqyfsenqyiypeiqrsqifycnhmgrepgvfkssffnysepqtiikktllkeyqsknfscqeerdlfleftekivqnfhninfnyllkkfcklpenyqslksqvkqivqsenkanqqscenlfnslydteisykqitnflrqiiqncvpnqllgkknfkvfleklyefvqmkrFenqkvldyicfmdvfdvewfvdlknqkftqkrkyisdkrkilgdlivfiinkivipvlrynfyitekhkegsqifyyrkpiwklvskltivkleeenlekveeklipedsfqkypqgklriipkkgsfrpimtflrkdkqknikLnlnQilmdsqlvfrnlkdmlgqkigysvfdnkqisekfaqfiekwknkgrpqlyyvtldikkcydsidqmkllnffnqsdliqdtyfinkyllfqrnkrpllqimdninfpyyfnlkerqiayslyddddqilqkgfkeiqsddrpfivinqdkprcitkdiihnhlkhisqynvisfnkvkfrqkrgipqglnisgvlcsfyfgkleeeytqflknaeqvngsinllmrltddylfisdsqqnalnlivqlqncannngfmfndqkittnfqfpqedynlehfkisvqnecqwigksidmntleiksiqkqtqqeinqtinvaisiknlksqlknklrslflNqlidyfnpninsfeglcrqlyhhskatvmkfypfmtklfqidlkkskqysvqygkentnenflkdilyytvedvckilcylqfedeinsnikeifknlyswimwdiivsylkkkkqfkgylnkllqkirksrffylkegckslqlilsqqkyqlnkkeleaiefidlnnliqdiktlipkisak/qriyssieeiiqqaqaseigqkkefyvygnlvsiqmknklyyyrctcqgksvlkyhgdsffcescqqfinpqvhlMlRafvqdstgtipvMiFDqqssqlinqidpsihvqeagqyvknciengqeeiirqlfskldfarfifeiQfenKeFnneqEiAyKvLkiekenikeeskyllkklehlinn >7lmb_A: title=TETRAHYMENA TELOMERASE T5D5 STRUCTURE AT 3.8 ANGSTROM organism=TETRAHYMENA THERMOPHILA DNA sequence DT(C8) DT(C9) DG(C10) DT(C14) DT(C15) DG(C16) DG(C17) DG(C18) DG(C19) DT(C20) DT(C21) chainA (339) PHE414 0 0 0 0 0 23 0 0 0 0 0 (468) ARG543 0 0 0 0 0 0 0 0 0 0 13 (548) TYR623 0 0 0 0 0 0 0 0 0 0 1 (675) GLN773 0 0 0 0 0 0 0 0 0 0 1 (828) ASN926 0 0 0 0 0 0 10 1 0 0 0 (829) GLN927 0 0 0 0 0 0 0 1 0 0 0 prot.sequence kqmltrkedlltvlkqisalkyvsnlyefllatekivqtseldtqfqefltttiiaseqnlvenykqkynqpnfsqltikqviddsiillgnkqnyvqqigtttigfyveyeninlsrqtlyssnfrnllnifgeedfkyflidflvftkveqngylqvagvclnqyfsenqyiypeiqrsqifycnhmgrepgvfkssffnysepqtiikktllkeyqsknfscqeerdlfleftekivqnfhninfnyllkkfcklpenyqslksqvkqivqsenkanqqscenlfnslydteisykqitnflrqiiqncvpnqllgkknfkvfleklyefvqmkrFenqkvldyicfmdvfdvewfvdlknqkftqkrkyisdkrkilgdlivfiinkivipvlrynfyitekhkegsqifyyrkpiwklvskltivkleeenlekveeklipedsfqkypqgklriipkkgsfRpimtflrkdkqkniklnlnqilmdsqlvfrnlkdmlgqkigysvfdnkqisekfaqfiekwknkgrpqlyyvtldikkcYdsidqmkllnffnqsdliqdtyfinkyllfqrnkrpllqimdninfpyyfnlkerqiayslyddddqilqkgfkeiqsddrpfivinqdkprcitkdiihnhlkhisqynvisfnkvkfrqkrgipQglnisgvlcsfyfgkleeeytqflknaeqvngsinllmrltddylfisdsqqnalnlivqlqncannngfmfndqkittnfqfpqedynlehfkisvqnecqwigksidmntleiksiqkqtqqeinqtinvaisiknlksqlknklrslflNQlidyfnpninsfeglcrqlyhhskatvmkfypfmtklfqidlkkskqysvqygkentnenflkdilyytvedvckilcylqfedeinsnikeifknlyswimwdiivsylkkkkqfkgylnkllqkirksrffylkegckslqlilsqqkyqlnkkeleaiefidlnnliqdiktlipkisak >7lmb_AD:Nucleic_acid-binding_proteins; title=TETRAHYMENA TELOMERASE T5D5 STRUCTURE AT 3.8 ANGSTROM organism=TETRAHYMENA THERMOPHILA DNA sequence DT(C8) DT(C9) DG(C10) DT(C14) DT(C15) DG(C16) DG(C17) DG(C18) DG(C19) DT(C20) DT(C21) chainA (339) PHE414 0 0 0 0 0 23 0 0 0 0 0 (468) ARG543 0 0 0 0 0 0 0 0 0 0 13 (548) TYR623 0 0 0 0 0 0 0 0 0 0 1 (675) GLN773 0 0 0 0 0 0 0 0 0 0 1 (828) ASN926 0 0 0 0 0 0 10 1 0 0 0 (829) GLN927 0 0 0 0 0 0 0 1 0 0 0 chainD ( 76) MET586 0 1 0 0 0 0 0 0 0 0 0 ( 78) ARG588 0 2 0 0 0 0 0 0 0 0 0 ( 91) MET601 0 5 0 0 0 0 0 0 0 0 0 ( 93) PHE603 2 0 0 0 0 0 0 0 0 0 0 ( 94) ASP604 1 0 0 0 0 0 0 0 0 0 0 (150) LYS660 0 4 5 0 0 0 0 0 0 0 0 (152) PHE662 0 0 38 0 0 0 0 0 0 0 0 (157) GLU667 0 0 10 0 0 0 0 0 0 0 0 prot.sequence kqmltrkedlltvlkqisalkyvsnlyefllatekivqtseldtqfqefltttiiaseqnlvenykqkynqpnfsqltikqviddsiillgnkqnyvqqigtttigfyveyeninlsrqtlyssnfrnllnifgeedfkyflidflvftkveqngylqvagvclnqyfsenqyiypeiqrsqifycnhmgrepgvfkssffnysepqtiikktllkeyqsknfscqeerdlfleftekivqnfhninfnyllkkfcklpenyqslksqvkqivqsenkanqqscenlfnslydteisykqitnflrqiiqncvpnqllgkknfkvfleklyefvqmkrFenqkvldyicfmdvfdvewfvdlknqkftqkrkyisdkrkilgdlivfiinkivipvlrynfyitekhkegsqifyyrkpiwklvskltivkleeenlekveeklipedsfqkypqgklriipkkgsfRpimtflrkdkqkniklnlnqilmdsqlvfrnlkdmlgqkigysvfdnkqisekfaqfiekwknkgrpqlyyvtldikkcYdsidqmkllnffnqsdliqdtyfinkyllfqrnkrpllqimdninfpyyfnlkerqiayslyddddqilqkgfkeiqsddrpfivinqdkprcitkdiihnhlkhisqynvisfnkvkfrqkrgipQglnisgvlcsfyfgkleeeytqflknaeqvngsinllmrltddylfisdsqqnalnlivqlqncannngfmfndqkittnfqfpqedynlehfkisvqnecqwigksidmntleiksiqkqtqqeinqtinvaisiknlksqlknklrslflNQlidyfnpninsfeglcrqlyhhskatvmkfypfmtklfqidlkkskqysvqygkentnenflkdilyytvedvckilcylqfedeinsnikeifknlyswimwdiivsylkkkkqfkgylnkllqkirksrffylkegckslqlilsqqkyqlnkkeleaiefidlnnliqdiktlipkisak/qriyssieeiiqqaqaseigqkkefyvygnlvsiqmknklyyyrctcqgksvlkyhgdsffcescqqfinpqvhlMlRafvqdstgtipvMiFDqqssqlinqidpsihvqeagqyvknciengqeeiirqlfskldfarfifeiqfenKeFnneqEiaykvlkiekenikeeskyllkklehlinn >7lni_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=SEMET CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA organism=Clostridioides difficile DNA sequence DT(d1):DT(e15) DT(d2):DA(e14) DC(d3):DG(e13) DA(d4):DT(e12) DA(d5):DT(e11) DA(d6):DT(e10) DA(d7):DT(e9) DA(d8):DT(e8) DG(d9):DC(e7) DT(d10):DA(e6) DC(d11):DG(e5) DC(d12):DG(e4) DC(d13):DG(e3) DA(d14):DT(e2) DA(d15):DA(e1) chainA ( 5) TYR30 0 0 0 0 0 0 0 55 0 0 0 0 0 0 0 (135) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (138) TYR168 0 0 0 0 0 0 0 47 0 0 0 0 0 0 0 (141) HIS171 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 (142) LYS172 0 0 0 0 6 9 4 0 0 0 0 0 0 0 0 (162) ASP192 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (163) LYS193 0 0 6 3 7 0 0 0 0 0 0 0 0 0 0 (191) TYR221 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (223) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (225) ASN255 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (226) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (228) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (316) GLN346 0 0 0 9 8 1 0 0 0 0 0 0 0 0 0 (319) ILE349 0 0 0 1 4 11 0 0 0 0 0 0 0 0 0 (349) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (395) ARG425 0 1 11 19 0 0 0 0 0 0 0 0 0 0 0 (396) GLU426 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 (401) ILE431 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (408) GLN438 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (409) TRP439 0 13 14 11 4 0 0 0 0 0 0 0 0 0 0 (411) ARG441 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 (425) TYR455 0 0 0 0 0 0 4 14 0 0 0 0 0 0 0 (426) LYS456 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 (442) SER472 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (443) ALA473 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (444) ASP474 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (446) TYR476 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (483) MET513 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (484) SER514 0 0 0 0 0 0 6 0 2 0 0 0 0 0 0 (487) ILE517 0 0 0 0 0 0 3 3 4 0 0 0 0 0 0 (491) TYR521 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 prot.sequence asgiYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >7lni_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=SEMET CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA organism=Clostridioides difficile DNA sequence DT(d1):DT(e15) DT(d2):DA(e14) DC(d3):DG(e13) DA(d4):DT(e12) DA(d5):DT(e11) DA(d6):DT(e10) DA(d7):DT(e9) DA(d8):DT(e8) DG(d9):DC(e7) DT(d10):DA(e6) DC(d11):DG(e5) DC(d12):DG(e4) DC(d13):DG(e3) DA(d14):DT(e2) DA(d15):DA(e1) chainA ( 5) TYR30 0 0 0 0 0 0 0 55 0 0 0 0 0 0 0 (135) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (138) TYR168 0 0 0 0 0 0 0 47 0 0 0 0 0 0 0 (141) HIS171 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 (142) LYS172 0 0 0 0 6 9 4 0 0 0 0 0 0 0 0 (162) ASP192 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (163) LYS193 0 0 6 3 7 0 0 0 0 0 0 0 0 0 0 (191) TYR221 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (223) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (225) ASN255 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (226) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (228) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (316) GLN346 0 0 0 9 8 1 0 0 0 0 0 0 0 0 0 (319) ILE349 0 0 0 1 4 11 0 0 0 0 0 0 0 0 0 (349) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (395) ARG425 0 1 11 19 0 0 0 0 0 0 0 0 0 0 0 (396) GLU426 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 (401) ILE431 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (408) GLN438 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (409) TRP439 0 13 14 11 4 0 0 0 0 0 0 0 0 0 0 (411) ARG441 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 (425) TYR455 0 0 0 0 0 0 4 14 0 0 0 0 0 0 0 (426) LYS456 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 (442) SER472 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (443) ALA473 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (444) ASP474 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (446) TYR476 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (483) MET513 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (484) SER514 0 0 0 0 0 0 6 0 2 0 0 0 0 0 0 (487) ILE517 0 0 0 0 0 0 3 3 4 0 0 0 0 0 0 (491) TYR521 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 chainB (405) ILE431 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence asgiYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/sgiyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >7lnj_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA organism=Clostridioides difficile DNA sequence DT(e1):DA(d14) DG(e2):DC(d13) DG(e3):DC(d12) DG(e4):DC(d11) DA(e5):DT(d10) DC(e6):DG(d9) DT(e7):DA(d8) DT(e8):DA(d7) DT(e9):DA(d6) DT(e10):DA(d5) DT(e11):DA(d4) DG(e12):DC(d3) DA(e13):DT(d2) DT(e14):DT(d1) chainA ( 5) TYR30 0 0 0 0 0 0 45 0 0 0 0 0 0 0 (131) ASN165 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (134) TYR168 0 0 0 0 0 0 44 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 7 8 0 0 0 0 (138) LYS172 0 0 0 0 0 0 0 4 9 6 0 0 0 0 (158) ASP192 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (159) LYS193 0 0 0 0 0 0 0 0 0 6 2 6 0 0 (187) TYR221 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (219) PHE253 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (221) ASN255 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (222) ILE256 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (224) VAL258 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (312) GLN346 0 0 0 0 0 0 0 0 1 7 9 0 0 0 (315) ILE349 0 0 0 0 0 0 0 0 4 4 2 0 0 0 (345) SER379 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (391) ARG425 0 0 0 0 0 0 0 0 0 0 18 11 4 0 (392) GLU426 0 0 0 0 0 0 0 0 0 0 1 0 1 0 (397) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (404) GLN438 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (405) TRP439 0 0 0 0 0 0 0 0 0 4 11 15 13 0 (407) ARG441 0 0 0 0 0 0 0 0 0 0 8 2 0 0 (421) TYR455 0 0 0 0 0 0 16 4 0 0 0 0 0 0 (422) LYS456 0 0 0 0 0 0 9 11 0 0 0 0 0 0 (438) SER472 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (439) ALA473 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (440) ASP474 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (442) TYR476 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (479) MET513 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (480) SER514 0 0 0 0 0 4 0 7 0 0 0 0 0 0 (483) ILE517 0 0 0 0 0 4 3 3 0 0 0 0 0 0 (487) TYR521 0 0 0 0 0 0 0 0 8 1 0 0 0 0 chainB (404) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence asgiYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >7lo5_D:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYOEM STRUCTURE DRDV-DNA COMPLEX organism=? DNA sequence DT(L4):DA(K25) DG(L5):DC(K24) DG(L6):DC(K23) DG(L7):DC(K22) DT(L8):DA(K21) DG(L9):DC(K20) DG(L10):DC(K19) DT(L11):DA(K18) DT(L12):DA(K17) DC(L13):DG(K16) DT(L14):DA(K15) DG(L15):DC(K14) DG(L16):DC(K13) DG(L17):DC(K12) DT(L18):DA(K11) DC(L19):DG(K10) DC(L20):DG(K9) DA(L21):DT(K8) DT(L22):DA(K7) DG(L23):DC(K6) DG(L24):DC(K5) DG(L25):DC(K4) DC(L26):DG(K3) DT(L27):DA(K2) chainD (304) PHE304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 (440) ASN448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (443) TYR451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 (446) ASN454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 (450) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (477) GLN485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 (478) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 6 0 0 0 0 (480) LYS488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 (539) ALA547 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (540) ASN548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 (546) ARG554 0 0 0 0 0 0 0 0 0 0 0 0 10 32 0 0 0 0 0 0 0 0 0 0 (554) PHE562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 (558) ILE566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (559) LYS567 0 0 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0 0 0 0 0 0 0 0 (654) LEU668 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (659) ASN673 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 (707) ARG721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 11 0 0 0 0 (747) GLU761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (748) MET762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 6 0 0 0 (750) TYR764 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 7 0 0 0 0 (788) LEU802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 (789) ASP803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 (793) LYS807 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 prot.sequence mslqlvkkfqkrledivayggtrnessvraafqqllsdwaegsglrlitevtqkavagnnvrpdgtlkdslqqsrgyweskdeadtlddeiqkklakgyprdniifedsrlavlmqngeevqrvdmgdagalagllklffefeppqvlefrkavdhfkdemphllkilreaadaaeqkadyrgerdhfveiakeainpdfsprdaremliqhiltgdlftsvfdnaqyhednniaqqlqqlaatfykgpvkrdiaertkryygaiqaaaaqiadhhekqrflkalyenfyraynpagaerlgiFytpgeivrfmieatdtllekhfqkeladkgveildpatgtgtfitelidflpkakleqkyreelhcnelallpyyianlnieatyaqkmgryeefrnivlvdtldntsglfgsvtaenlerakrqnarpvrviigNppYraNqanEndnnknreykeidrrikatyvaastaQKtKlydmysrflrwatdrlkedgivafvsnssfidsrtfdgfrkevvkdfdhiyildmkgnANtsgerRkreggnvFndqIKvgvavyflvrsakdtkiwyhavpdfwrareklewlkttkfediefdhirpdakhnwlgqvdeendwneflpvadkdtkqakglgqeraifklysLgvvtNrdewvysraedeladkvryfigryneiiklplgdlmsrnwegdikmtRatiadaqsrksysleknsivpslyrpfdvlkmyfsknlnEMqYqmpsifpkgvgenvvialsgspaakpfqvlatdilpsLDlleKtqclpfyrytmngerlnnitdyalkafqthyaisredifhyvyavlhhpayrekyalnlrqefpripfypefgrwaawgrelmalhigfesvapyplkrtdeppkndtpealalakkarlkvqrdaakqptgaveldglttlagipaaawayklgnrsalewvlerhkettpkdatirekfntyrfadhkervidllarvttvsvetvrivgempaetm >7lpg_D:DNase_I-like; title=APE1 PRODUCT COMPLEX WITH ABASIC RIBONUCLEOTIDE DNA organism=Homo sapiens DNA sequence DG(C12):DC(E10) DC(C13):DG(E9) DG(C14):DC(E8) DC(C15):DG(E7) DA(C16):DT(E6) DT(C17):DA(E5) DC(C18):DG(E4) DA(C19):DT(E3) DG(C20):DC(E2) DC(C21):DG(E1) chainD ( 56) LYS98 0 1 3 0 0 0 0 0 0 0 (131) ARG177 12 0 0 0 0 0 0 0 0 0 (223) TYR269 3 0 0 0 0 0 0 0 0 0 (224) MET270 12 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdeegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkknagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >7lph_D:DNase_I-like; title=APE1 MN-BOUND PRODUCT COMPLEX WITH ABASIC RIBONUCLEOTIDE DNA organism=Homo sapiens DNA sequence DG(C12):DC(E10) DC(C13):DG(E9) DG(C14):DC(E8) DC(C15):DG(E7) DA(C16):DT(E6) DT(C17):DA(E5) DC(C18):DG(E4) DA(C19):DT(E3) DG(C20):DC(E2) DC(C21):DG(E1) chainD ( 56) LYS98 0 1 3 0 0 0 0 0 0 0 (130) ARG177 4 0 0 0 0 0 0 0 0 0 (222) TYR269 3 0 0 0 0 0 0 0 0 0 (223) MET270 12 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqetKcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkknagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsDhcpitlylal >7lpi_D:DNase_I-like; title=APE1 PHOSPHOROTHIOATE SUBSTRATE COMPLEX WITH ABASIC RIBONUCLEOTIDE DNA organism=Homo sapiens DNA sequence DG(C1):DC(E21) DG(C2):DC(E20) DA(C3):DT(E19) DT(C4):DA(E18) DC(C5):DG(E17) DC(C6):DG(E16) DG(C7):DC(E15) DT(C8):DA(E14) DC(C9):DG(E13) DG(C10):DC(E12) DA(C11):YA4(E11) DG(C12):DC(E10) DC(C13):DG(E9) DG(C14):DC(E8) DC(C15):DG(E7) DA(C16):DT(E6) DT(C17):DA(E5) DC(C18):DG(E4) DA(C19):DT(E3) DG(C20):DC(E2) DC(C21):DG(E1) chainD ( 56) LYS98 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (130) ARG177 0 0 0 0 0 0 0 0 0 38 4 9 0 0 0 0 0 0 0 0 0 (182) ASN229 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 (222) TYR269 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (223) MET270 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqEtKcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >7lpj_D:DNase_I-like; title=APE1 MN-BOUND PHOSPHOROTHIOATE SUBSTRATE COMPLEX WITH ABASIC RIBONUCLEOTIDE DNA organism=Homo sapiens DNA sequence DG(C1):DC(E21) DG(C2):DC(E20) DA(C3):DT(E19) DT(C4):DA(E18) DC(C5):DG(E17) DC(C6):DG(E16) DG(C7):DC(E15) DT(C8):DA(E14) DC(C9):DG(E13) DG(C10):DC(E12) DA(C11):YA4(E11) DG(C12):DC(E10) DC(C13):DG(E9) DG(C14):DC(E8) DC(C15):DG(E7) DA(C16):DT(E6) DT(C17):DA(E5) DC(C18):DG(E4) DA(C19):DT(E3) DG(C20):DC(E2) DC(C21):DG(E1) chainD (135) ARG177 0 0 0 0 0 0 0 0 0 38 9 12 0 0 0 0 0 0 0 0 0 (187) ASN229 0 0 0 0 0 0 0 0 1 14 0 0 0 0 0 0 0 0 0 0 0 (227) TYR269 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (228) MET270 0 0 0 0 0 0 0 0 0 0 6 14 0 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqetkcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrnpkgnkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >7lri_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA, DTTP, AND CA(2+) ION organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DA(E1):TTP(A601) DC(E2):DG(E34) OMC(E3):DG(E33) DC(E4):DG(E32) OMC(E5):DG(E31) DC(E6):DG(E30) DC(E7):DG(E29) DC(E8):DG(E28) DT(E9):DA(E27) DT(E10):DA(E26) DC(E11):DG(E25) DG(E12):DC(E24) DG(E13):DC(E23) DT(E14):DA(E22) DG(E15):DC(E21) DC(E16):DG(E20) chainA ( 61) PHE61 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ILE63 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG72 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) GLU89 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 (110) ASP110 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ASP113 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ALA114 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ASP185 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) LYS220 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaIkkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaiKkKdstkwrklvdFrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsKllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7lri_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA, DTTP, AND CA(2+) ION organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DA(F1):TTP(C602) DC(F2):DG(F34) OMC(F3):DG(F33) DC(F4):DG(F32) OMC(F5):DG(F31) DC(F6):DG(F30) DC(F7):DG(F29) DC(F8):DG(F28) DT(F9):DA(F27) DT(F10):DA(F26) DC(F11):DG(F25) DG(F12):DC(F24) DG(F13):DC(F23) DT(F14):DA(F22) DG(F15):DC(F21) DC(F16):DG(F20) chainC ( 61) PHE61 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS65 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG72 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) GLU89 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 (110) ASP110 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ASP113 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ALA114 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ASP185 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) LYS220 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaiKkkdstkwrklvdFrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsKllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7lrm_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA, DCTP, AND CA(2+) ION organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(E-1) DG(E0) DC(E1):DG(E33) DG(E32) DC(E3):DG(E31) DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) DT(E16) DT(E17) DT(E18) chainA ( 61) PHE61 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (501) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpQgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqYalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaiKkkdstkwrklvdFrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwKgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwgltpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrQlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7lrm_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA, DCTP, AND CA(2+) ION organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DT(F-1) DG(F0) DC(F1):DG(F33) DG(F32) DC(F3):DG(F31) DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) DT(F16) DT(F17) DT(F18) chainC ( 61) PHE61 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU74 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) GLN151 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (448) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (501) TYR501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFaikkkdstkwrkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpQgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqYalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkKdstkwrklvdfrElnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgSpaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwgpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskLlrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwy >7lrx_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA, L-DCTP, AND CA(2+) ION organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 89) GLU89 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwgltpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrQlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7lrx_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA, L-DCTP, AND CA(2+) ION organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(F1):DG(F33) OMC(F2):DG(F32) DC(F3):DG(F31) OMC(F4):DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) chainC ( 89) GLU89 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwgpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskLlrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwy >7lry_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA, (-)FTC- TP, AND CA(2+) ION organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 89) GLU89 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 13 3 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwgltpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrQlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7lry_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA, (-)FTC- TP, AND CA(2+) ION organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(F1):DG(F33) OMC(F2):DG(F32) DC(F3):DG(F31) OMC(F4):DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) chainC ( 89) GLU89 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs >7lry_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA, (-)FTC- TP, AND CA(2+) ION organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(F1):DG(F33) OMC(F2):DG(F32) DC(F3):DG(F31) OMC(F4):DG(F30) DC(F5):DG(F29) DC(F6):DG(F28) DC(F7):DG(F27) DT(F8):DA(F26) DT(F9):DA(F25) DC(F10):DG(F24) DG(F11):DC(F23) DG(F12):DC(F22) DT(F13):DA(F21) DG(F14):DC(F20) DC(F15):DG(F19) chainC ( 89) GLU89 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (475) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvs/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwgpflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskLlrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwy >7lsk_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA, L-DTTP, AND CA(2+) ION organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(E2):DG(E34) OMC(E3):DG(E33) DC(E4):DG(E32) OMC(E5):DG(E31) DC(E6):DG(E30) DC(E7):DG(E29) DC(E8):DG(E28) DT(E9):DA(E27) DT(E10):DA(E26) DC(E11):DG(E25) DG(E12):DC(E24) DG(E13):DC(E23) DT(E14):DA(E22) DG(E15):DC(E21) DC(E16):DG(E20) chainA ( 89) GLU89 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsKllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7lsk_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA, L-DTTP, AND CA(2+) ION organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 DNA sequence DC(F2):DG(F34) OMC(F3):DG(F33) DC(F4):DG(F32) OMC(F5):DG(F31) DC(F6):DG(F30) DC(F7):DG(F29) DC(F8):DG(F28) DT(F9):DA(F27) DT(F10):DA(F26) DC(F11):DG(F25) DG(F12):DC(F24) DG(F13):DC(F23) DT(F14):DA(F22) DG(F15):DC(F21) DC(F16):DG(F20) chainC ( 89) GLU89 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) GLN91 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ILE94 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 (115) TYR115 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) PRO157 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLN161 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) TYR183 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 (184) MET184 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainD prot.sequence pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphPaglkkkksvtvldvgdayfsVpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaiFqssmtkilepfkkqnpdiviyqymdDLyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsKllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7lsy_AB: title=NHEJ SHORT-RANGE SYNAPTIC COMPLEX organism=HOMO SAPIENS DNA sequence DG(E1):DC(D14) DT(E2):DA(D13) DT(E3):DA(D12) DC(E4):DG(D11) DT(E5):DA(D10) DT(E6):DA(D9) DA(E7):DT(D8) DG(E8):DC(D7) DT(E9):DA(D6) DA(E10):DT(D5) DT(E11):DA(D4) DA(E12):DT(D3) DT(E13):DA(D2) DA(E14):DT(D1) chainA chainB (241) ARG271 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (370) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence ykysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisvhfeesskledllrkvraketrkralsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplie >7lsy_JY: title=NHEJ SHORT-RANGE SYNAPTIC COMPLEX organism=HOMO SAPIENS DNA sequence DC(D17):DG(V20) DT(D18):DA(V19) DG(D19):DC(V18) DA(D20):DT(V17) DC(D21):DG(V16) DT(D22):DA(V15) DG(D23):DC(V14) DT(D24):DA(V13) DT(D25):DA(V12) DC(D26):DG(V11) DC(N1):DG(V10) DG(N2):DC(V9) DT(N3):DA(V8) DT(N4):DA(V7) DC(N6):DA(V6) DA(N7):DT(V4) DT(N8):DA(V3) DT(N9):DA(V2) DG(N10):DC(V1) chainJ ( 4) SER33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 chainY prot.sequence ykySgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisvhfeesskledllrkvraketrkralsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/sqtVashvpfadlcstleriqkskgraekirhfrefldswrkfhdalhkndvtdsfypamrlilpqlerermaygiketmlaklyiellnlprdgkdalkllnyrtptgdagdfamiayfvlkprclqkgsltiqqvndlldsiasnnsakrkdlikksllqlitqssaleqkwlirmiikdlklgvsqqtifsvfhndaaelhnvttdlekvcrqlhdpsvglsdisitlfsafkpmlaaiadiehiekdmkhqsfyietkldgermqmhkdgdvykyfsrngynytdqfgasptegsltpfihnafkadiqicildgemmaynpntqtfmqkgtkfdikrmdlqtcycvfdvlmvnnkklghetlrkryeilssiftpipgrieivqktqahtknevidalneaidkreegimvkqplsiykpdkrgegwlkikpeyvsglmdeldilivggywgkgsrggmmshflcavaekpppgekpsvfhtlsrvgsgctmkelydlglklakywkpfhrkappssilcgtekpevyiepcnsvivqikaaeivpsdmyktgctlrfpriekirddkewhecmtlddleqlrgkasgklaskhlysnifedvefcvmsgtqpkpdlenriaefggyivqnpgpdtycviagsenirvkniilsnkhdvvkpawllecfktksfvpwqprfmihmcpstkehfareydcygdsyfidtdlnqlkevfsgiknsneqtpeemasliadleyryswdcsplsmfrrhtvyldsyavindlstknegtrlaikalelrfhgakvvsclaegvshviigedhsrvadfkafrrtfkrkfkilkeswvtdsidkcelqeenqyli >7lsy_K:SPOC_domain-like;vWA-like; title=NHEJ SHORT-RANGE SYNAPTIC COMPLEX organism=? DNA sequence DG(N13):DC(M14) DT(N14):DA(M13) DT(N15):DA(M12) DC(N16):DG(M11) DT(N17):DA(M10) DT(N18):DA(M9) DA(N19):DT(M8) DG(N20):DC(M7) DT(N21):DA(M6) DA(N22):DT(M5) DT(N23):DA(M4) DA(N24):DT(M3) DT(N25):DA(M2) DA(N26):DT(M1) chainK (241) ARG271 0 0 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkranpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplie >7lt3_ABC: title=NHEJ LONG-RANGE SYNAPTIC COMPLEX organism=HOMO SAPIENS DNA sequence DG(E1):DA(D29) DT(E2):DC(D28) DT(E4):DA(D27) DA(E5):DT(D25) DA(E6):DA(D24) DT(E7):DG(D23) DT(E9):DA(D22) DA(E10):DT(D21) DC(E11):DG(D20) DT(E12):DA(D19) DG(E13):DC(D18) DA(E14):DT(D17) DC(E15):DG(D16) DA(E16):DT(D15) DT(E17):DA(D14) DC(E18):DG(D13) DA(E19):DT(D12) DG(E20):DC(D11) DA(E21):DT(D10) DG(E22):DC(D9) DT(E23):DA(D8) DT(E24):DA(D7) DC(E25):DG(D6) DT(E26):DA(D5) DT(E27):DA(D4) DA(E28):DT(D3) chainA chainB (370) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 chainC (2406) GLN2736 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2410) SER2740 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2414) ALA2744 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ykysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisvhfeesskledllrkvraketrkralsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeifvddlldm/agvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkryavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlptykdyvdlfrhllssdqmmdsseslnhllydefvksvlkivekldltleiaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegvpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsalevsalsraaqkgfnkvvlkhlkktkeaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptllyslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgderqclpsldlsckqlasgllelafafgglcerlvslllnpavlstsvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvmdelnrhecmapltalvkhmhrslprdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltpmgrtdllrlrrrfmrdQeklSlmyArkgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrllprlppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltpisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgsssedsekviaglyqrafqhlseavqaaeeeaagvidaymtladfcdqqlrkeeenasvidsaelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm >7lt3_JKL: title=NHEJ LONG-RANGE SYNAPTIC COMPLEX organism=HOMO SAPIENS DNA sequence DG(N1):DA(M29) DT(N2):DC(M28) DT(N4):DA(M27) DA(N5):DT(M25) DA(N6):DA(M24) DT(N7):DG(M23) DT(N9):DA(M22) DA(N10):DT(M21) DC(N11):DG(M20) DT(N12):DA(M19) DG(N13):DC(M18) DA(N14):DT(M17) DC(N15):DG(M16) DA(N16):DT(M15) DT(N17):DA(M14) DC(N18):DG(M13) DA(N19):DT(M12) DG(N20):DC(M11) DA(N21):DT(M10) DG(N22):DC(M9) DT(N23):DA(M8) DT(N24):DA(M7) DC(N25):DG(M6) DT(N26):DA(M5) DT(N27):DA(M4) DA(N28):DT(M3) chainJ chainK (370) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 chainL (2406) GLN2736 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2410) SER2740 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2414) ALA2744 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ykysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisvhfeesskledllrkvraketrkralsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeifvddlldm/agvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkryavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlptykdyvdlfrhllssdqmmdsseslnhllydefvksvlkivekldltleiaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegvpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsalevsalsraaqkgfnkvvlkhlkktkeaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptllyslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgderqclpsldlsckqlasgllelafafgglcerlvslllnpavlstsvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvmdelnrhecmapltalvkhmhrslprdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltpmgrtdllrlrrrfmrdQeklSlmyArkgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrllprlppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltpisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgsssedsekviaglyqrafqhlseavqaaeeeaagvidaymtladfcdqqlrkeeenasvidsaelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm >7lt5_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND COFACTOR SAH organism=Clostridioides difficile DNA sequence DT(e1):DA(d14) DG(e2):DC(d13) DG(e3):DC(d12) DG(e4):DC(d11) DA(e5):DT(d10) DC(e6):DG(d9) DT(e7):DA(d8) DT(e8):DA(d7) DT(e9):DA(d6) DT(e10):DA(d5) DT(e11):DA(d4) DG(e12):DC(d3) DA(e13):DT(d2) DT(e14):DT(d1) chainA ( 26) TYR30 0 0 0 0 0 0 24 0 0 0 0 0 0 0 (156) ASN165 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (159) TYR168 0 0 0 0 0 0 50 0 0 0 0 0 0 0 (162) HIS171 0 0 0 0 0 0 0 0 6 7 0 0 0 0 (163) LYS172 0 0 0 0 0 0 0 3 9 8 0 0 0 0 (183) ASP192 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (184) LYS193 0 0 0 0 0 0 0 0 0 8 6 7 0 0 (212) TYR221 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (244) PHE253 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (246) ASN255 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (247) ILE256 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (249) VAL258 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (337) GLN346 0 0 0 0 0 0 0 0 1 8 9 0 0 0 (340) ILE349 0 0 0 0 0 0 0 0 10 5 1 0 0 0 (370) SER379 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (416) ARG425 0 0 0 0 0 0 0 0 0 0 20 11 2 0 (417) GLU426 0 0 0 0 0 0 0 0 0 0 1 0 1 0 (422) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 2 1 (429) GLN438 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (430) TRP439 0 0 0 0 0 0 0 0 0 4 12 15 13 0 (432) ARG441 0 0 0 0 0 0 0 0 0 0 9 2 0 0 (446) TYR455 0 0 0 0 0 0 14 4 0 0 0 0 0 0 (447) LYS456 0 0 0 0 0 0 8 11 0 0 0 0 0 0 (463) SER472 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (464) ALA473 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (465) ASP474 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (467) TYR476 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (504) MET513 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (505) SER514 0 0 0 0 0 4 0 6 0 0 0 0 0 0 (508) ILE517 0 0 0 0 0 3 3 3 0 0 0 0 0 0 (512) TYR521 0 0 0 0 0 0 0 0 7 1 0 0 0 0 chainB (430) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence sqdnfllskeyensldvdtkkasgiYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/ddisqdnfllskeyensldvdtkkasgiyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >7luf_B:DNA/RNA_polymerases;Ribonuclease_H-like; title=HSV1 POLYMERASE TERNARY COMPLEX WITH DSDNA AND PNU-183792 organism=Human herpesvirus 1 DNA sequence DC(F-13):DG(E5) DG(F-12):DC(E4) DA(F-11):DT(E3) DT(F-10):DA(E2) DC(F-9):DG(E1) DC(F-8):DG(E0) DT(F-7):DA(E-1) DT(F-6):DA(E-2) DC(F-5):DG(E-3) DC(F-4):DG(E-4) DC(F-3):DG(E-5) DC(F-2):DG(E-6) DT(F-1):DA(E-7) DA(F0):DT(E-8) DC(F1):DG(E-9) chainB (592) ARG692 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 (839) LYS939 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 (840) LYS940 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (859) ARG959 0 0 0 0 0 0 0 0 0 0 15 12 0 0 0 (946) ASN1046 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence nfynpylapvgptqrhtyysecdefrfiaprvldedappekragvhdghlkrapkvycggderdvlrvgsggfwprrsrlwggvdhapagfnptvtvfhvydilenvehaygmraaqfharfmdaitptgtvitllgltpeghrvavhvygtrqyfymnkeevdrhlqcraprdlcermaaalrespgasfrgisadhfeaevvertdvyyyetrpalfyrvyvrsgrvlsylcdnfcpaikkyeggvdattrfildnpgfvtfgwyrlkpgrnntlaqprapmafgtssdvefnctadnlaieggmsdlpayklmcfdiackaggedelafpvaghpedlviqiscllydlsttalehvllfslgscdlpeshlnelaarglptpvvlefdsefemllafmtlvkqygpefvtgyniinfdwpfllakltdiykvpldgygrmngrgvfrvwdigqshfqkrskikvngmvnidmygiitdkiklssyklnavaeavlkdkkkdlsyrdipayyaagpaqrgvigeyciqdsllvgqlffkflphlelsavarlaginitrtiydgqqirvftcllrladqkgfilpdtqRhvgyqgarvhdptsgfhvnpvvgfdfaslypsiiqahnlcfstlslradavahleagkdyleievggrrlffvkahvresllsillrdwlamrkqirsripqsspeeavlldkqqaaikvvcnsvygftgvqhgllpclhvaatvttigremllatreyvharwaafeqlladfpeaadmrapgpysmriiygdtdsifvlcrgltaagltamgdkmashisralflppiklecektftkllliakKKyigviyggkmlikgvdlvRknncafinrtsralvdllfyddtvsgaaaalaerpaeewlarplpeglqafgavlvdahrritdperdiqdfvltaelsrhpraytNkrlahltvyyklmarraqvpsikdripyvivaqtreveetvarlaalrevselaedpayaiahgvalntdyyfshllgaacvtfkalfgnnakitesllkrfipevwh >7lv8_ABCDEFGH:Histone-fold; title=STRUCTURE OF THE MARSEILLEVIRUS NUCLEOSOME organism=MARSEILLEVIRUS MARSEILLEVIRUS DNA sequence DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) chainB chainA ( 2) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainC ( 32) ARG136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainE ( 2) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH chainG prot.sequence cRqkgagsagtgsetnsqevrsqmrstcliipkerfrtmakeiskkeghdvhiaeaaldmlqvivesctvrllekalvitysgkrtrvtskdietafmlehg/lAdhvsvgetqipkastqhllrkagslsaagdtevpirgfvhmklhklvqksllamqlakrktimksdvkkaaelmhlpvfaiptkdsgakgsvfls/eskegsrsskaklqisvarserllrehggcsRvsegaavalaaaieyfmgevlelagnaardskkvrisvkhitlaiqndaalfavvgkgvfsg/nfrlglrnmlaqihpdisvqtealselsniaVflgkkishgavtllpegtktikssavllaagdlygkdlgrhavgemtkavtrygsak/cRqkgagsagtgsetnsqevrsqmrstcliipkerfrtmakeiskkeghdvhiaeaaldmlqvivesctvrllekalvitysgkrtrvtskdietafmlehg/lAdhvsvgetqipkastqhllrkagslsaagdtevpirgfvhmklhklvqksllamqlakrktimksdvkkaaelmhlpvfaiptkdsgakgsvfls/eSkegsrsskaklqisvarserllrehggcsrvsegaavalaaaieyfmgevlelagnaardskkvrisvkhitlaiqndaalfavvgkgvfsg/nFrlglrnmlaqihpdisvqtealselsniavflgkkishgavtllpegtktikssavllaagdlygkdlgrhavgemtkavtrygsak >7lv8_C:Histone-fold; title=STRUCTURE OF THE MARSEILLEVIRUS NUCLEOSOME organism=MARSEILLEVIRUS MARSEILLEVIRUS DNA sequence DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) chainC ( 32) ARG136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eskegsrsskaklqisvarserllrehggcsRvsegaavalaaaieyfmgevlelagnaardskkvrisvkhitlaiqndaalfavvgkgvfsg >7lv9_A:Histone-fold; title=MARSEILLEVIRUS HETEROTRIMERIC (HEXAMERIC) NUCLEOSOME organism=? DNA sequence DG(G-34):DC(H34) DA(G-33):DT(H33) DC(G-32):DG(H32) DA(G-31):DT(H31) DG(G-30):DC(H30) DC(G-29):DG(H29) DT(G-28):DA(H28) DC(G-27):DG(H27) DT(G-26):DA(H26) DA(G-25):DT(H25) DG(G-24):DC(H24) DC(G-23):DG(H23) DA(G-22):DT(H22) DC(G-21):DG(H21) DC(G-20):DG(H20) DG(G-19):DC(H19) DC(G-18):DG(H18) DT(G-17):DA(H17) DT(G-16):DA(H16) DA(G-15):DT(H15) DA(G-14):DT(H14) DA(G-13):DT(H13) DC(G-12):DG(H12) DG(G-11):DC(H11) DC(G-10):DG(H10) DA(G-9):DT(H9) DC(G-8):DG(H8) DG(G-7):DC(H7) DT(G-6):DA(H6) DA(G-5):DT(H5) DC(G-4):DG(H4) DG(G-3):DC(H3) DG(G-2):DC(H2) DA(G-1):DT(H1) DT(G0):DA(H0) DT(G1):DA(H-1) DC(G2):DG(H-2) DT(G3):DA(H-3) DC(G4):DG(H-4) DC(G5):DG(H-5) DC(G6):DG(H-6) DC(G7):DG(H-7) DC(G8):DG(H-8) DG(G9):DC(H-9) DC(G10):DG(H-10) DG(G11):DC(H-11) DT(G12):DA(H-12) DT(G13):DA(H-13) DT(G14):DA(H-14) DT(G15):DA(H-15) DA(G16):DT(H-16) DA(G17):DT(H-17) DC(G18):DG(H-18) DC(G19):DG(H-19) DG(G20):DC(H-20) DC(G21):DG(H-21) DC(G22):DG(H-22) DA(G23):DT(H-23) DA(G24):DT(H-24) DG(G25):DC(H-25) DG(G26):DC(H-26) DG(G27):DC(H-27) DG(G28):DC(H-28) DA(G29):DT(H-29) DT(G30):DA(H-30) DT(G31):DA(H-31) DA(G32):DT(H-32) DC(G33):DG(H-33) DT(G34):DA(H-34) DC(G35):DG(H-35) DC(G36):DG(H-36) DC(G37):DG(H-37) DT(G38):DA(H-38) DA(G39):DT(H-39) DG(G40):DC(H-40) DT(G41):DA(H-41) DC(G42):DG(H-42) DT(G43):DA(H-43) DC(G44):DG(H-44) DC(G45):DG(H-45) DA(G46):DT(H-46) DG(G47):DC(H-47) DG(G48):DC(H-48) DC(G49):DG(H-49) DA(G50):DT(H-50) DC(G51):DG(H-51) DG(G52):DC(H-52) DT(G53):DA(H-53) DG(G54):DC(H-54) DT(G55):DA(H-55) DC(G56):DG(H-56) DA(G57):DT(H-57) DG(G58):DC(H-58) DA(G59):DT(H-59) DT(G60):DA(H-60) chainA ( 2) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence cRqkgagsagtgsetnsqevrsqmrstcliipkerfrtmakeiskkeghdvhiaeaaldmlqvivesctvrllekalvitysgkrtrvtskdietafmlehg >7lv9_ABCDEF:Histone-fold; title=MARSEILLEVIRUS HETEROTRIMERIC (HEXAMERIC) NUCLEOSOME organism=MARSEILLEVIRUS MARSEILLEVIRUS DNA sequence DA(H-60):DT(G60) DT(H-59):DA(G59) DC(H-58):DG(G58) DT(H-57):DA(G57) DG(H-56):DC(G56) DA(H-55):DT(G55) DC(H-54):DG(G54) DA(H-53):DT(G53) DC(H-52):DG(G52) DG(H-51):DC(G51) DT(H-50):DA(G50) DG(H-49):DC(G49) DC(H-48):DG(G48) DC(H-47):DG(G47) DT(H-46):DA(G46) DG(H-45):DC(G45) DG(H-44):DC(G44) DA(H-43):DT(G43) DG(H-42):DC(G42) DA(H-41):DT(G41) DC(H-40):DG(G40) DT(H-39):DA(G39) DA(H-38):DT(G38) DG(H-37):DC(G37) DG(H-36):DC(G36) DG(H-35):DC(G35) DA(H-34):DT(G34) DG(H-33):DC(G33) DT(H-32):DA(G32) DA(H-31):DT(G31) DA(H-30):DT(G30) DT(H-29):DA(G29) DC(H-28):DG(G28) DC(H-27):DG(G27) DC(H-26):DG(G26) DC(H-25):DG(G25) DT(H-24):DA(G24) DT(H-23):DA(G23) DG(H-22):DC(G22) DG(H-21):DC(G21) DC(H-20):DG(G20) DG(H-19):DC(G19) DG(H-18):DC(G18) DT(H-17):DA(G17) DT(H-16):DA(G16) DA(H-15):DT(G15) DA(H-14):DT(G14) DA(H-13):DT(G13) DA(H-12):DT(G12) DC(H-11):DG(G11) DG(H-10):DC(G10) DC(H-9):DG(G9) DG(H-8):DC(G8) DG(H-7):DC(G7) DG(H-6):DC(G6) DG(H-5):DC(G5) DG(H-4):DC(G4) DA(H-3):DT(G3) DG(H-2):DC(G2) DA(H-1):DT(G1) DA(H0):DT(G0) DT(H1):DA(G-1) DC(H2):DG(G-2) DC(H3):DG(G-3) DG(H4):DC(G-4) DT(H5):DA(G-5) DA(H6):DT(G-6) DC(H7):DG(G-7) DG(H8):DC(G-8) DT(H9):DA(G-9) DG(H10):DC(G-10) DC(H11):DG(G-11) DG(H12):DC(G-12) DT(H13):DA(G-13) DT(H14):DA(G-14) DT(H15):DA(G-15) DA(H16):DT(G-16) DA(H17):DT(G-17) DG(H18):DC(G-18) DC(H19):DG(G-19) DG(H20):DC(G-20) DG(H21):DC(G-21) DT(H22):DA(G-22) DG(H23):DC(G-23) DC(H24):DG(G-24) DT(H25):DA(G-25) DA(H26):DT(G-26) DG(H27):DC(G-27) DA(H28):DT(G-28) DG(H29):DC(G-29) DC(H30):DG(G-30) DT(H31):DA(G-31) DG(H32):DC(G-32) DT(H33):DA(G-33) DC(H34):DG(G-34) chainB chainA ( 2) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainC chainF chainE ( 2) ARG114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence cRqkgagsagtgsetnsqevrsqmrstcliipkerfrtmakeiskkeghdvhiaeaaldmlqvivesctvrllekalvitysgkrtrvtskdietafmlehg/lAdhvsvgetqipkastqhllrkagslsaagdtevpirgfvhmklhklvqksllamqlakrktimksdvkkaaelmhlpvfaiptkdsgakgsvfls/eSkegsrsskaklqisvarserllrehggcsrvsegaavalaaaieyfmgevlelagnaardskkvrisvkhitlaiqndaalfavvgkgvfsg/nFrlglrnmlaqihpdisvqtealselsniavflgkkishgavtllpegtktikssavllaagdlygkdlgrhavgemtkavtrygsak/cRqkgagsagtgsetnsqevrsqmrstcliipkerfrtmakeiskkeghdvhiaeaaldmlqvivesctvrllekalvitysgkrtrvtskdietafmlehg/lAdhvsvgetqipkastqhllrkagslsaagdtevpirgfvhmklhklvqksllamqlakrktimksdvkkaaelmhlpvfaiptkdsgakgsvfls >7lvv_AC:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYOEM STRUCTURE DRDV-DNA COMPLEX organism=DEINOCOCCUS WULUMUQIENSIS DNA sequence DG(F2):DC(E27) DG(F3):DC(E26) DT(F4):DA(E25) DG(F5):DC(E24) DG(F6):DC(E23) DG(F7):DC(E22) DT(F8):DA(E21) DG(F9):DC(E20) DG(F10):DC(E19) DT(F11):DA(E18) DT(F12):DA(E17) DC(F13):DG(E16) DT(F14):DA(E15) DG(F15):DC(E14) DG(F16):DC(E13) DG(F17):DC(E12) DT(F18):DA(E11) DC(F19):DG(E10) DC(F20):DG(E9) DA(F21):DT(E8) DT(F22):DA(E7) DG(F23):DC(E6) DG(F24):DC(E5) DG(F25):DC(E4) DC(F26):DG(E3) DT(F27):DA(E2) DG(F28):DC(E1) chainA (303) PHE304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (437) ASN448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (439) PRO450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (440) TYR451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0 0 0 0 0 0 0 0 (443) ASN454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (474) GLN485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 (475) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 3 0 0 0 0 0 (477) LYS488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 (536) ALA547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (537) ASN548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 (543) ARG554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 30 0 0 0 0 0 0 0 0 0 0 0 (549) ASN560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (551) PHE562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (553) ASP564 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 18 0 0 0 0 0 0 0 0 0 0 0 (555) ILE566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (556) LYS567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58 0 0 0 0 0 0 0 0 0 0 0 (653) VAL671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (655) ASN673 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 (703) ARG721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 5 0 0 0 0 0 (743) GLU761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (744) MET762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 7 0 0 0 0 (746) TYR764 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 0 0 0 0 0 (784) LEU802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 (785) ASP803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 chainC ( 61) ARG62 0 0 0 0 1 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence slqlvkkfqkrledivayggtrnessvraafqqllsdwaegsglrlitevtqkavagnnvrpdgtlkdslqqsrgyweskdeadtlddeiqkklakgyprdniifedsrlavlmqngeevqrvdmgdagalagllklffefeppqvlefrkavdhfkdemphllkilreaadaaeqkadyrgerdhfveiakeainpdfsprdaremliqhiltgdlftsvfdnaqyhednniaqqlqqlaatfykgpvkrdiaertkryygaiqaaaaqiadhhekqrflkalyenfyraynpagaerlgiFytpgeivrfmieatdtllekhfqkeladkgveildpatgtgtfitelidflpkakleqkyreelhcnelallpyyianlnieatyaqkmgryeefrnivlvdtldntlfgsvtaenlerakrqnarpvrviigNpPYraNqanendnnknreykeidrrikatyvaastaQKtKlydmysrflrwatdrlkedgivafvsnssfidsrtfdgfrkevvkdfdhiyildmkgnANtsgerRkreggNvFnDqIKvgvavyflvrsadtkiwyhavpdfwrareklewlkttkfediefdhirpdakhnwlgqvdeendwneflpvadkdtkqakglgqeraifklyslgvVtNrdewvysraedeladkvryfigryneiiklplgdlmsrnwegdikmtRatiadaqsrksysleknsivpslyrpfdvlkmyfsknlnEMqYqmpsifpkgvgenvvialsgspaakpfqvlatdilpsLDllektqclpfyrytmngerlnnitdyalkafqthyadtsisredifhyvyavlhhpayrekyalnlrqefpripfypefgrwaawgrelmalhigfesvapyplkrtdeppkndtpealalakkarlkvqrdaakqptgaveldglttlagipaaawayklgnrsalewvlerhkettpkdatirekfntyrfadhkervidllarvttvsvetvrivgempaetm/slqlvkkfqkrledivayggtrnessvraafqqllsdwaegsglrlitevtqkavagnnvRpdgtlkdslqqsrgyweskdeadtlddeiqkklakgyprdniifedsrlavlmqngeevqrvdmgdagalagllklffefep >7lvv_BD:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYOEM STRUCTURE DRDV-DNA COMPLEX organism=DEINOCOCCUS WULUMUQIENSIS DNA sequence DG(H2):DC(G27) DG(H3):DC(G26) DT(H4):DA(G25) DG(H5):DC(G24) DG(H6):DC(G23) DG(H7):DC(G22) DT(H8):DA(G21) DG(H9):DC(G20) DG(H10):DC(G19) DT(H11):DA(G18) DT(H12):DA(G17) DC(H13):DG(G16) DT(H14):DA(G15) DG(H15):DC(G14) DG(H16):DC(G13) DG(H17):DC(G12) DT(H18):DA(G11) DC(H19):DG(G10) DC(H20):DG(G9) DA(H21):DT(G8) DT(H22):DA(G7) DG(H23):DC(G6) DG(H24):DC(G5) DG(H25):DC(G4) DC(H26):DG(G3) DT(H27):DA(G2) DG(H28):DC(G1) chainB (303) PHE304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 (439) ASN448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 (441) PRO450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (442) TYR451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 (476) GLN485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 (477) LYS486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 5 0 0 0 0 0 (479) LYS488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 6 0 0 0 0 0 0 0 (538) ALA547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (539) ASN548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 (545) ARG554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 28 0 0 0 0 0 0 0 0 0 0 0 (553) PHE562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (555) ASP564 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 (557) ILE566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (558) LYS567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 (651) LEU668 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (656) ASN673 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (703) THR720 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (704) ARG721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 1 0 0 0 0 (744) GLU761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (745) MET762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 (747) TYR764 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 5 0 0 0 0 0 (785) LEU802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 (786) ASP803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 (790) LYS807 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 17 0 0 0 0 0 0 0 chainD ( 61) ARG62 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence slqlvkkfqkrledivayggtrnessvraafqqllsdwaegsglrlitevtqkavagnnvrpdgtlkdslqqsrgyweskdeadtlddeiqkklakgyprdniifedsrlavlmqngeevqrvdmgdagalagllklffefeppqvlefrkavdhfkdemphllkilreaadaaeqkadyrgerdhfveiakeainpdfsprdaremliqhiltgdlftsvfdnaqyhednniaqqlqqlaatfykgpvkrdiaertkryygaiqaaaaqiadhhekqrflkalyenfyraynpagaerlgiFytpgeivrfmieatdtllekhfqkeladkgveildpatgtgtfitelidflpkakleqkyreelhcnelallpyyianlnieatyaqkmgryeefrnivlvdtldntgglfgsvtaenlerakrqnarpvrviigNpPYranqanendnnknreykeidrrikatyvaastaQKtKlydmysrflrwatdrlkedgivafvsnssfidsrtfdgfrkevvkdfdhiyildmkgnANtsgerRkreggnvFnDqIKvgvavyflvrsdtkiwyhavpdfwrareklewlkttkfediefdhirpdakhnwlgqvdeendwneflpvadkdtkqakglgqeraifklysLgvvtNrdewvysraedeladkvryfigryneiiklplgdlmsrnwegdikmTRatiadaqsrksysleknsivpslyrpfdvlkmyfsknlnEMqYqmpsifpkgvgenvvialsgspaakpfqvlatdilpsLDlleKtqclpfyrytmngerlnnitdyalkafqthyadtsisredifhyvyavlhhpayrekyalnlrqefpripfypefgrwaawgrelmalhigfesvapyplkrtdeppkndtpealalakkarlkvqrdaakqptgaveldglttlagipaaawayklgnrsalewvlerhkettpkdatirekfntyrfadhkervidllarvttvsvetvrivgempaetm/slqlvkkfqkrledivayggtrnessvraafqqllsdwaegsglrlitevtqkavagnnvRpdgtlkdslqqsrgyweskdeadtlddeiqkklakgyprdniifedsrlavlmqngeevqrvdmgdagalagllklffefeppqv >7lvv_C: title=CRYOEM STRUCTURE DRDV-DNA COMPLEX organism=? DNA sequence DG(F2):DC(E27) DG(F3):DC(E26) DT(F4):DA(E25) DG(F5):DC(E24) DG(F6):DC(E23) DG(F7):DC(E22) DT(F8):DA(E21) DG(F9):DC(E20) DG(F10):DC(E19) DT(F11):DA(E18) DT(F12):DA(E17) DC(F13):DG(E16) DT(F14):DA(E15) DG(F15):DC(E14) DG(F16):DC(E13) DG(F17):DC(E12) DT(F18):DA(E11) DC(F19):DG(E10) DC(F20):DG(E9) DA(F21):DT(E8) DT(F22):DA(E7) DG(F23):DC(E6) DG(F24):DC(E5) DG(F25):DC(E4) DC(F26):DG(E3) DT(F27):DA(E2) DG(F28):DC(E1) chainC ( 61) ARG62 0 0 0 0 1 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence slqlvkkfqkrledivayggtrnessvraafqqllsdwaegsglrlitevtqkavagnnvRpdgtlkdslqqsrgyweskdeadtlddeiqkklakgyprdniifedsrlavlmqngeevqrvdmgdagalagllklffefep >7lw8_A: title=HUMAN EXONUCLEASE 5 CRYSTAL STRUCTURE IN COMPLEX WITH A SSDNA organism=Homo sapiens DNA sequence DT(B4) DT(B5) DT(B6) DT(B7) DT(B8) DT(B9) DT(B10) DT(B11) DT(B12) DT(B13) chainA ( 10) LEU78 7 0 0 0 0 0 0 0 0 0 ( 11) LYS79 1 0 0 0 0 0 0 0 0 0 ( 12) TYR80 22 0 0 0 0 0 0 0 0 0 ( 14) TYR82 12 0 10 1 0 0 0 0 0 0 ( 16) THR84 0 0 0 1 0 0 0 0 0 0 ( 23) TRP91 0 0 0 0 0 0 19 0 0 0 ( 27) GLN95 0 0 0 0 0 0 1 0 0 0 ( 32) LYS100 1 0 0 0 0 0 0 0 0 0 (103) LYS198 0 0 0 0 0 3 0 0 0 0 (107) ARG202 0 0 0 0 0 0 0 10 0 0 (109) MET204 0 0 0 0 0 0 0 2 0 0 (112) LEU207 0 0 0 0 0 0 0 3 0 0 (115) GLN210 0 0 0 0 0 4 14 0 0 0 (118) LYS213 0 0 0 0 0 5 0 0 0 0 (119) ASP214 0 0 0 0 0 1 0 0 0 0 (249) ARG344 0 0 0 0 0 0 0 0 32 0 (250) THR345 0 0 0 0 0 0 0 4 0 0 prot.sequence ilspmerfhLKYlYvTdlatqnWcelQtaygKelpgflvpvttkedawaikflnillliptlqseghirefpvfgevegvllvgvidelhytakgelelaelKtrrRpMlpLeaQkkKDcfqvslykyifdamvqgkvtpaslihhtklclekplgpsvlrhaqqggfsvkslgdlmelvflsltlsdlpvidilkieyihqetatvlgteivafkekevrakvqhymaywmghrepqgvdveeawkcRTctyadicewr >7lxh_A:ARM_repeat; title=BACILLUS CEREUS DNA GLYCOSYLASE ALKD BOUND TO A CC1065-ADENINE NUCLEOBASE ADDUCT AND DNA CONTAINING AN ABASIC SITE organism=Bacillus cereus DNA sequence DG(C2):DC(B9) DC(C3):DG(B8) DC(C4):DG(B7) DT(C6):DA(B5) DT(C7):DA(B4) DG(C8):DC(B3) DC(C9):DG(B2) chainA ( 29) TYR27 0 0 10 0 0 0 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqkaigwvlreyaktnpdvvweyvqnnelaplskreaikhikqny >7lxj_A:ARM_repeat; title=BACILLUS CEREUS DNA GLYCOSYLASE ALKD BOUND TO A DUOCARMYCIN SA- ADENINE NUCLEOBASE ADDUCT AND DNA CONTAINING AN ABASIC SITE organism=Bacillus cereus DNA sequence DG(B2):DC(C9) DC(B3):DG(C8) DA(B4):DT(C7) DA(B5):DT(C6) DG(B7):DC(C4) DG(B8):DC(C3) DC(B9):DG(C2) chainA ( 29) TYR27 0 0 0 0 11 0 0 prot.sequence vpmhpfvkalqehftahqnpekaepmarYmknhflflgiqtperrqllkdiiqihtlpdqkdfqiiirelwdlperefqaaaldimqkykkhinethipfleelivtkswwdsvdsivptflgdiflkhpelisayipkwiasdniwlqraailfqlkykqkmdeellfwiigqlhsskeffiqkaigwvlreyaktnpdvvweyvqnnelaplskreaikhikqny >7lya_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE HUMAN NUCLEOSOME CORE PARTICLE WITH LINKED HISTONE PROTEINS H2A AND H2B organism=HOMO SAPIENS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DG(I-70):DC(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DC(I70):DG(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainD ( 1) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainH chainC chainG ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfgg/sakAktrssraglqfpvgrvhrllrkgnyservgagapvylaavleYltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/Rkrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfgg/sakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsrkesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >7lyb_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE HUMAN NUCLEOSOME CORE PARTICLE IN COMPLEX WITH BRCA1-BARD1-UBCH5C organism=HOMO SAPIENS DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DG(I-70):DC(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DC(I70):DG(J-70) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainD ( 1) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainH chainC chainG ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/kvlRDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvIrdavtytehakrktvtamdvvyalkrqgrtlygfgg/sakAKtrssraglqfpvgrvhrllrkgnyservgagapvylaavleYltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/RkrsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdnIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/sakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkt/rsrkesysiyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >7lyb_G:Histone-fold; title=CRYO-EM STRUCTURE OF THE HUMAN NUCLEOSOME CORE PARTICLE IN COMPLEX WITH BRCA1-BARD1-UBCH5C organism=? DNA sequence DA(I-73):DT(J73) DT(I-72):DA(J72) DC(I-71):DG(J71) DG(I-70):DC(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DC(I70):DG(J-70) chainG ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkt >7lyc_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE HUMAN NUCLEOSOME CORE PARTICLE UBIQUITYLATED AT HISTONE H2A LYS13 AND LYS15 IN COMPLEX WITH BARD1 (RESIDUES 415- 777) organism=HOMO SAPIENS DNA sequence DT(J-72):DT(I73) DC(J-71):DA(I72) DG(J-70):DC(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DC(J70):DG(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainG ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/akrhrkvlrdniqgitkpaiRrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/sakaktrssraglqfpvgrvHrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RkrsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/kvlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvIrdavtytehakrktvtamdvvyalkrqgrtlygfgg/sakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >7lyc_G:Histone-fold; title=CRYO-EM STRUCTURE OF THE HUMAN NUCLEOSOME CORE PARTICLE UBIQUITYLATED AT HISTONE H2A LYS13 AND LYS15 IN COMPLEX WITH BARD1 (RESIDUES 415- 777) organism=HOMO SAPIENS DNA sequence DT(J-72):DT(I73) DC(J-71):DA(I72) DG(J-70):DC(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DC(J70):DG(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainG ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >7lys_A: title=CRYO-EM STRUCTURE OF CASPHI-2 (CAS12J) BOUND TO CRRNA AND DNA organism=BIGGIEVIRUS MOS11 DNA sequence DT(C0):DA(D0) DA(C1):DT(D-1) DA(C2):DT(D-2) DC(C3):DG(D-3) DT(C4):DA(D-4) DA(C5):DT(D-5) DC(C6):DG(D-6) DG(C7):DC(D-7) DC(C8):DG(D-8) DG(C9):DC(D-9) chainA ( 24) LYS29 10 0 0 0 0 0 0 0 0 0 ( 28) LYS33 0 0 5 0 0 0 0 0 0 0 ( 99) LYS104 0 1 0 0 0 0 0 0 0 0 (121) VAL126 0 0 2 0 0 0 0 0 0 0 (122) GLN127 0 3 7 7 0 0 0 0 0 0 (125) ASN130 0 1 0 0 0 0 0 0 0 0 (126) LEU131 3 0 0 0 0 0 0 0 0 0 (197) GLN202 0 12 10 2 0 0 0 0 0 0 (198) THR203 0 0 0 1 5 0 0 0 0 0 (337) ASP342 2 0 0 0 0 0 0 0 0 0 prot.sequence vesefskvlkkhfpgerfrssymKrggKilaaqgeeavvaylqgkseeeppnfqppakchvvtksrdfaewpimkaseaiqryiyalstteraackpgKsseshaawfaatgvsnhgyshVQglNLifdhtlgrydgvlkkvqlrnekararlesinasradeglpeikaeeeevatnetghllqppginpsfyvyQTispqayrprdeivlppeyagyvrdpnapiplgvvrnrcdiqkgcpgyipewqreagtaispktgkavtvpglspkknkrmrrywrsekekaqdallvtvrigtdwvvidvrgllrnarwrtiapkdislnalldlftgDpvidvrrnivtftytldacgtyarkwtlkgkqtkatldkltatqtvalvaidlgqtnpisagisrvtqengalqcepldrftlpddllkdisayriawdrneeelrarsvealpeaqqaevraldgvsketartqlcadfgldpkrlpwdkmssnttfiseallsnsvsrdqvfftpapkpvevmrkdrtwaraykprlsveaqklknealwalkrtspeylklsrrkeelcrrsinyviektrrrtqcqivipviedlnvrffhgsgkrlpgwdnfftakkenrwfiqglhkafsdlrthrsfyvfevrpertsidvathnltqvaltgkt >7lyt_A: title=CRYO-EM STRUCTURE OF CASPHI-2 (CAS12J) BOUND TO CRRNA AND PHOSPHOROTHIOATE-DNA organism=BIGGIEVIRUS MOS11 DNA sequence DC(D-9):DG(C9) DG(D-8):DC(C8) DC(D-7):DG(C7) DG(D-6):DC(C6) DT(D-5):DA(C5) DA(D-4):DT(C4) DG(D-3):DC(C3) DT(D-2):DA(C2) DT(D-1):DA(C1) DA(D0):DT(C0) chainA ( 25) LYS29 0 0 0 0 0 0 0 0 0 9 ( 29) LYS33 0 0 0 0 0 0 0 6 5 0 (100) LYS104 0 0 0 0 0 0 0 0 1 0 (122) VAL126 0 0 0 0 0 0 0 2 0 0 (123) GLN127 0 0 0 0 0 0 2 5 2 0 (127) LEU131 0 0 0 0 0 0 0 0 0 2 (198) GLN202 0 0 0 0 0 0 3 13 13 0 (199) THR203 0 0 0 0 0 6 2 0 0 0 (338) ASP342 0 0 0 0 0 0 0 0 0 3 prot.sequence avesefskvlkkhfpgerfrssymKrggKilaaqgeeavvaylqgkseeeppnfqppakchvvtksrdfaewpimkaseaiqryiyalstteraackpgKsseshaawfaatgvsnhgyshVQglnLifdhtlgrydgvlkkvqlrnekararlesinasradeglpeikaeeeevatnetghllqppginpsfyvyQTispqayrprdeivlppeyagyvrdpnapiplgvvrnrcdiqkgcpgyipewqreagtaispktgkavtvpglspkknkrmrrywrsekekaqdallvtvrigtdwvvidvrgllrnarwrtiapkdislnalldlftgDpvidvrrnivtftytldacgtyarkwtlkgkqtkatldkltatqtvalvaidlgqtnpisagisrvtqengalqcepldrftlpddllkdisayriawdrneeelrarsvealpeaqqaevraldgvsketartqlcadfgldpkrlpwdkmssnttfiseallsnsvsrdqvfftpapkkgakkkapvevmrkdrtwaraykprlsveaqklknealwalkrtspeylklsrrkeelcrrsinyviektrrrtqcqivipviedlnvrffhgsgkrlpgwdnfftakkenrwfiqglhkafsdlrthrsfyvfevrpertsitcpkcghcevgnrdgeafqclscgktcnadldvathnltqvaltgktmpkr >7m08_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=POST-CATALYTIC NICKED COMPLEX OF DNA POLYMERASE LAMBDA WITH BOUND 1- NT GAPPED SSB SUBSTRATE AND INCOMING DUMPNPP organism=HOMO SAPIENS DNA sequence DA(T5):DT(P7) DG(T6):DC(P6) DT(T7):DA(P5) DA(T8):DT(P4) DC(T9):DG(P3) DT(T10):DA(P2) DG(T11):DC(P1) chainA (234) LYS472 0 0 0 1 0 0 0 (267) TYR505 5 9 0 0 0 0 0 (272) ALA510 8 0 0 0 0 0 0 (275) ASN513 5 0 0 0 0 0 0 (276) ARG514 28 0 0 0 0 0 0 (279) ARG517 9 6 0 0 0 0 0 prot.sequence wvcaqpssqkatnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsehalstagrvlptptekdvfrllglpyrepaerdw >7m0a_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=INCOMPLETE IN CRYSTALLO INCORPORATION BY DNA POLYMERASE LAMBDA BOUND TO BLUNT-ENDED DSB SUBSTRATE AND INCOMING DTTP organism=HOMO SAPIENS DNA sequence DC(P1):DG(U6) DA(P2):DT(U5) DG(P3):DC(U4) DT(P4):DA(U3) DG(P5):DC(U2) DC(P6):DG(U1) DT(P7):DA(T5) chainA (237) LYS472 0 0 0 5 1 0 0 (270) TYR505 0 0 0 0 0 9 6 (275) ALA510 0 0 0 0 0 0 8 (278) ASN513 0 0 0 0 0 0 5 (279) ARG514 0 0 0 0 0 0 28 (282) ARG517 0 0 0 0 0 6 8 prot.sequence ldkwvcaqpssqkatnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvgrvlptptekdvfrllglpyrepaerdw >7m0b_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=PRE-CATALYTIC QUATERNARY COMPLEX OF DNA POLYMERASE LAMBDA WITH BOUND MISMATCHED DSB AND INCOMING DUMPNPP organism=HOMO SAPIENS DNA sequence DC(p1):DG(t11) DA(p2):DT(t10) DG(p3):DC(t9) DT(p4):DA(t8) DG(p5):DT(t7) DC(p6):DG(t6) chainA (237) LYS472 0 0 0 5 2 0 (270) TYR505 0 0 0 0 0 9 (282) ARG517 0 0 0 0 0 6 (294) GLU529 0 0 0 0 0 1 prot.sequence ldkwvcaqpssqkatnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsahfnrsmRalaktkgmslsEhalstavvpgrvlptptekdvfrllglpyrepaerdw >7m0c_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=POST-CATALYTIC NICKED COMPLEX OF DNA POLYMERASE LAMBDA WITH BOUND MISMATCHED DSB SUBSTRATE organism=HOMO SAPIENS DNA sequence DC(P1):DG(U5) DA(P2):DT(U4) DG(P3):DC(U3) DT(P4):DA(U2) DG(P5):DT(U1) DC(P6):DG(T6) DT(P7):DA(T5) chainA (237) LYS472 0 0 0 5 3 0 0 (270) TYR505 0 0 0 0 0 9 6 (275) ALA510 0 0 0 0 0 0 8 (278) ASN513 0 0 0 0 0 0 5 (279) ARG514 0 0 0 0 0 0 30 (282) ARG517 0 0 0 0 0 6 8 (294) GLU529 0 0 0 0 0 3 0 prot.sequence ldkwvcaqpssqkatnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrpgrvlptptekdvfrllglpyrepaerdw >7m0d_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=PRE-CATALYTIC QUATERNARY COMPLEX OF DNA POLYMERASE LAMBDA WITH BOUND COMPLEMENTARY DSB SUBSTRATE AND INCOMING DUMPNPP organism=HOMO SAPIENS DNA sequence DC(f1):DG(e11) DA(f2):DT(e10) DG(f3):DC(e9) DT(f4):DA(e8) DG(f5):DC(e7) DC(f6):DG(e6) chainA (236) LYS472 0 0 0 0 1 0 (269) TYR505 0 0 0 0 0 9 (281) ARG517 0 0 0 0 0 6 (293) GLU529 0 0 0 0 1 8 prot.sequence dkwvcaqpssqkatnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqKylgvcrlpgpgrrhrrldiivvpysefacallYftgsahfnrsmRalaktkgmslsEhalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw >7m1x_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF NUCLEOSOME CONTAINING MOUSE HISTONE VARIANT H2A.Z organism=XENOPUS LAEVIS / MUS MUSCULUS DNA sequence DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainA chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 45) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 30) ARG1045 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG1430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence yrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/avsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksli/ktrkesyaiyvykvlkqvhpdtgisskamSimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/avsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggvi/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7m2u_5A: title=NUCLEOTIDE EXCISION REPAIR COMPLEX TFIIH RAD4-33 organism=? DNA sequence DA(W16) DA(W17) DC(W18) DA(W19) DC(W20) DT(W21) DG(W22) DC(W23) DG(W24) DA(W25) DG(W26) DA(W27) DT(W28) DA(W29) chain5 chainA ( 14) ASN554 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) PHE556 0 31 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ASN558 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) GLU560 0 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) VAL594 0 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) PHE597 5 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) PHE599 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PRO607 0 12 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ararkgalvqcdpsikalilqidakmsdivleelddthllvnpskvefvkhelnrllskniynpmd/ipplasasgeitkNtFgNiEvfaptmipgncclvenpvaikaarflgvefapaVtsFkFergstvkPvlsgivvakwlreaietaidgswntlllklrirsklns >7m46_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA, TTP:AT MG2+ PRODUCT STATE TERNARY COMPLEX, 5 MIN organism=Homo sapiens DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) DT(P7):DA(T5) chainA (217) LYS472 0 0 0 1 0 0 0 (250) TYR505 0 0 0 0 0 9 5 (255) ALA510 0 0 0 0 0 0 8 (258) ASN513 0 0 0 0 0 0 5 (259) ARG514 0 0 0 0 0 0 26 (262) ARG517 0 0 0 0 0 6 9 (274) GLU529 0 0 0 0 1 8 0 prot.sequence nhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgakvgpgrvlptptekdvfrllglpyrepaerdw >7m47_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA, TTP:AT MG2+ PRODUCT STATE TERNARY COMPLEX, 60 MIN organism=? DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) DT(P7):DA(T5) chainA (217) LYS472 0 0 0 1 0 0 0 (250) TYR505 0 0 0 0 0 9 5 (255) ALA510 0 0 0 0 0 0 8 (258) ASN513 0 0 0 0 0 0 5 (259) ARG514 0 0 0 0 0 0 29 (262) ARG517 0 0 0 0 0 6 10 prot.sequence nhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgakvgpgrvlptptekdvfrllglpyrepaerdw >7m48_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA, TTP:AT MG2+ PRODUCT STATE TERNARY COMPLEX, 960 MIN organism=Homo sapiens DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) DT(P7):DA(T5) chainA (217) LYS472 0 0 0 1 0 0 0 (250) TYR505 0 0 0 0 0 9 6 (255) ALA510 0 0 0 0 0 0 8 (258) ASN513 0 0 0 0 0 0 5 (259) ARG514 0 0 0 0 0 0 29 (262) ARG517 0 0 0 0 0 6 9 prot.sequence nhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsehalstavvrnthgakvgpgrvlptptekdvfrllglpyrepaerdw >7m4a_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA, TTP:AT MN2+ PRODUCT STATE TERNARY COMPLEX, 20 MIN organism=Homo sapiens DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) DT(P7):DA(T5) chainA (250) TYR505 0 0 0 0 0 9 6 (255) ALA510 0 0 0 0 0 0 8 (258) ASN513 0 0 0 0 0 0 5 (259) ARG514 0 0 0 0 0 0 26 (262) ARG517 0 0 0 0 0 6 9 (274) GLU529 0 0 0 0 1 8 0 prot.sequence nhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetkylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgakvgpgrvlptptekdvfrllglpyrepaerdw >7m4b_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA, TTP:AT MN2+ PRODUCT STATE TERNARY COMPLEX, 60 MIN organism=Homo sapiens DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) DT(P7):DA(T5) chainA (217) LYS472 0 0 0 1 0 0 0 (250) TYR505 0 0 0 0 0 9 5 (255) ALA510 0 0 0 0 0 0 8 (258) ASN513 0 0 0 0 0 0 5 (259) ARG514 0 0 0 0 0 0 27 (262) ARG517 0 0 0 0 0 6 10 (274) GLU529 0 0 0 0 1 8 0 prot.sequence nhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgakvgpgrvlptptekdvfrllglpyrepaerdw >7m4c_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA, TTP:AT MN2+ PRODUCT STATE TERNARY COMPLEX, 960 MIN organism=Homo sapiens DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) DT(P7):DA(T5) chainA (217) LYS472 0 0 0 1 0 0 0 (250) TYR505 0 0 0 0 0 9 5 (255) ALA510 0 0 0 0 0 0 8 (258) ASN513 0 0 0 0 0 0 5 (259) ARG514 0 0 0 0 0 0 26 (262) ARG517 0 0 0 0 0 6 9 (274) GLU529 0 0 0 0 1 8 0 prot.sequence nhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgakvgpgrvlptptekdvfrllglpyrepaerdw >7m4f_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA, DCTP:AT MG2+ PRODUCT STATE TERNARY COMPLEX, 300 MIN organism=Homo sapiens DNA sequence DC(P1):DG(T11) DA(P2):DT(T10) DG(P3):DC(T9) DT(P4):DA(T8) DA(P5):DT(T7) DC(P6):DG(T6) DC(P7):DA(T5) chainA (250) TYR505 0 0 0 0 0 10 22 (255) ALA510 0 0 0 0 0 0 7 (258) ASN513 0 0 0 0 0 0 5 (262) ARG517 0 0 0 0 0 0 35 (274) GLU529 0 0 0 0 0 1 0 prot.sequence nhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetKylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNrsmRalaktkgmslsEhalstapgrvlptptekdvfrllglpyrepaerdw >7m4g_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA, DCTP:AT MG2+ PRODUCT STATE TERNARY COMPLEX, 960 MIN organism=Homo sapiens DNA sequence DA(T5):DC(P7) DG(T6):DC(P6) DT(T7):DA(P5) DA(T8):DT(P4) DC(T9):DG(P3) DT(T10):DA(P2) DG(T11):DC(P1) chainA (250) TYR505 22 11 0 0 0 0 0 (255) ALA510 5 0 0 0 0 0 0 (258) ASN513 5 0 0 0 0 0 0 (259) ARG514 1 0 0 0 0 0 0 (262) ARG517 35 0 0 0 0 0 0 (274) GLU529 0 2 0 0 0 0 0 prot.sequence nhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetkylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavpgrvlptptekdvfrllglpyrepaerdw >7m4i_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA, DCTP:AT MN2+ PRODUCT STATE TERNARY COMPLEX, 420 MIN organism=Homo sapiens DNA sequence DA(T5):DC(P7) DG(T6):DC(P6) DT(T7):DA(P5) DA(T8):DT(P4) DC(T9):DG(P3) DT(T10):DA(P2) DG(T11):DC(P1) chainA (248) TYR505 24 11 0 0 0 0 0 (253) ALA510 7 0 0 0 0 0 0 (256) ASN513 5 0 0 0 0 0 0 (257) ARG514 1 0 0 0 0 0 0 (260) ARG517 36 0 0 0 0 0 0 (272) GLU529 0 1 1 0 0 0 0 prot.sequence hnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgvdvlithpdgrshrgifsrlldslrqegfltddlvkgetkylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnhgakvgpgrvlptptekdvfrllglpyrepaerdw >7m4j_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA, DCTP:AT MN2+ PRODUCT STATE TERNARY COMPLEX, 960 MIN organism=Homo sapiens DNA sequence DA(T5):DC(P7) DG(T6):DC(P6) DT(T7):DA(P5) DA(T8):DT(P4) DC(T9):DG(P3) DT(T10):DA(P2) DG(T11):DC(P1) chainA (250) TYR505 21 10 0 0 0 0 0 (255) ALA510 7 0 0 0 0 0 0 (258) ASN513 5 0 0 0 0 0 0 (259) ARG514 1 0 0 0 0 0 0 (262) ARG517 39 0 0 0 0 0 0 (274) GLU529 0 1 0 0 0 0 0 prot.sequence nhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetkylgvcrlpgpgrrhrrldiivvpysefacallYftgsAhfNRsmRalaktkgmslsEhalstavvrnthgpgrvlptptekdvfrllglpyrepaerdw >7m5w_A:HMG-box; title=CRYSTAL STRUCTURE OF THE HMG-C1 DOMAIN OF HUMAN CAPICUA BOUND TO DNA organism=HOMO SAPIENS DNA sequence DG(B1):DC(C18) DG(B2):DC(C17) DT(B3):DA(C16) DT(B4):DA(C15) DA(B5):DT(C14) DT(B6):DA(C13) DG(B7):DC(C12) DA(B8):DT(C11) DA(B9):DT(C10) DT(B10):DA(C9) DG(B11):DC(C8) DA(B12):DT(C7) DA(B13):DT(C6) DA(B14):DT(C5) DA(B15):DT(C4) DA(B16):DT(C3) DG(B17):DC(C2) DC(B18):DG(C1) chainA ( 5) ARG36 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 ( 8) ASN39 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 ( 10) PHE41 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 ( 11) MET42 0 0 0 0 0 0 0 16 13 0 0 0 0 0 0 0 0 0 ( 18) ARG49 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 ( 30) ASN61 0 0 0 0 0 0 0 0 0 7 12 0 0 0 0 0 0 0 ( 31) ARG62 0 0 0 0 0 0 0 0 0 6 6 7 0 0 0 0 0 0 ( 34) SER65 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 ( 72) TRP103 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASN105 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (125) LEU168 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ARG171 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 0 0 (129) GLU172 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) GLN175 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 prot.sequence dhirRpmNaFMifskrhRalvhqrhpnqdNRtvSkilgewwyalgpkekqkyhdlafqvkeahfkahpdwkWcNpysslrrtldqrralvmqlfqdhgffpsaqataafqaryadifpskvclqLkiREvrQkimqaa >7m7l_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA WITH DA-ENDED PRIMER AND DAMPNPP organism=Homo sapiens DNA sequence DA(P2):DT(T13) DG(P3):DC(T12) DC(P4):DG(T11) DG(P5):DC(T10) DT(P6):DA(T9) DC(P7):DG(T8) DA(P8):DT(T7) DA(P9):DT(T6) chainA (319) SER322 0 0 0 0 0 0 2 1 (321) ASN324 0 0 0 0 0 0 0 1 (379) ARG382 0 0 17 11 0 0 0 0 (416) MET421 0 0 0 0 0 0 1 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgtvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkiRslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgtewsppltMlflcatkfsas >7m7m_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA WITH RA-ENDED PRIMER AND DAMPNPP organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DT(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 5 0 0 0 0 0 0 0 0 ( 45) TRP42 0 58 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 0 1 0 0 0 0 0 0 (319) ASN324 0 0 0 0 1 0 0 0 0 0 0 0 (321) PRO326 0 13 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >7m7n_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA WITH 2'-FA-ENDED PRIMER AND DAMPNPP organism=Homo sapiens DNA sequence DT(T7):DA(P8) DG(T8):DC(P7) DA(T9):DT(P6) DC(T10):DG(P5) DG(T11):DC(P4) DC(T12):DG(P3) DT(T13):DA(P2) chainA (317) SER322 1 0 0 0 0 0 0 (377) ARG382 0 0 0 0 1 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >7m7o_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA WITH DT-ENDED PRIMER AND 0.1 MM DAMPNPP organism=Homo sapiens DNA sequence DA(P2):DT(T13) DG(P3):DC(T12) DC(P4):DG(T11) DG(P5):DC(T10) DT(P6):DA(T9) DC(P7):DG(T8) DA(P8):DT(T7) DT(P9):DA(T6) chainA (322) SER322 0 0 0 0 0 0 4 1 (378) LEU378 0 0 0 0 0 0 4 0 (382) ARG382 0 0 2 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgpeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >7m7p_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH DA-ENDED PRIMER AND DAMPNPP organism=Homo sapiens DNA sequence DA(P2):DT(T13) DG(P3):DC(T12) DC(P4):DG(T11) DG(P5):DC(T10) DT(P6):DA(T9) DC(P7):DG(T8) DA(P8):DT(T7) DA(P9):DT(T6) chainA (322) SER322 0 0 0 0 0 0 2 1 (324) ASN324 0 0 0 0 0 0 0 1 (378) LEU378 0 0 0 0 0 1 3 1 (382) ARG382 0 0 16 11 0 0 0 0 (418) MET421 0 0 0 0 0 0 1 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgpeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntstewsppltMlflcatkfsas >7m7q_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH DT-ENDED PRIMER AND DAMPNPP organism=Homo sapiens DNA sequence DA(T6):DT(P9) DT(T7):DA(P8) DG(T8):DC(P7) DA(T9):DT(P6) DC(T10):DG(P5) DG(T11):DC(P4) DC(T12):DG(P3) DT(T13):DA(P2) chainA (319) SER322 1 3 0 0 0 0 0 0 (375) LEU378 0 5 2 0 0 0 0 0 (379) ARG382 0 0 0 0 1 4 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgpvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >7m7r_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH RA-ENDED PRIMER AND DAMPNPP organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DT(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 5 0 0 0 0 0 0 0 0 ( 45) TRP42 0 56 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 3 1 0 0 0 0 0 0 0 0 ( 65) SER62 0 0 8 0 0 0 0 0 0 0 0 0 (322) SER322 0 0 0 0 0 1 0 0 0 0 0 0 (324) ASN324 0 0 0 0 2 0 0 0 0 0 0 0 (326) PRO326 0 13 0 0 0 0 0 0 0 0 0 0 (329) THR329 0 3 0 0 0 0 0 0 0 0 0 0 (378) LEU378 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRSmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgpeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >7m7s_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH DT-ENDED PRIMER AND 0.1 MM DAMPNPP organism=Homo sapiens DNA sequence DA(T6):DT(P9) DT(T7):DA(P8) DG(T8):DC(P7) DA(T9):DT(P6) DC(T10):DG(P5) DG(T11):DC(P4) DC(T12):DG(P3) DT(T13):DA(P2) chainA ( 64) ARG61 13 0 0 0 0 0 0 0 (322) SER322 1 1 0 0 0 0 0 0 (378) LEU378 0 1 1 0 0 0 0 0 (382) ARG382 0 0 0 0 10 16 0 0 (421) PHE423 0 2 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgpeetvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgtewsppltmlFlcatkfsas >7m7t_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH DT-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 0 S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 1 (376) LEU378 0 0 0 0 0 0 1 0 (380) ARG382 0 9 2 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m7u_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH DT-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 480S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 64) ARG61 4 0 0 0 0 0 0 0 (320) SER322 1 2 0 0 0 0 0 0 (376) LEU378 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 3 8 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m7y_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA WITH DA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 0 S organism=Homo sapiens DNA sequence DT(T5):DA(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 1 0 0 0 0 0 0 (322) ASN324 1 0 0 0 0 0 0 0 (380) ARG382 0 0 0 0 1 5 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m7z_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA WITH DA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 40 S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DA(P8):DT(T5) chainA (320) SER322 0 0 0 0 0 0 1 0 (322) ASN324 0 0 0 0 0 0 0 1 (380) ARG382 0 8 4 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m80_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA WITH DA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 100 S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DA(P8):DT(T5) chainA (320) SER322 0 0 0 0 0 0 1 0 (322) ASN324 0 0 0 0 0 0 0 1 (380) ARG382 0 4 2 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m81_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA WITH DA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 100 S organism=Homo sapiens DNA sequence DT(T5):DA(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 1 0 0 0 0 0 0 (322) ASN324 1 0 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 7 2 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m82_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA WITH DA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 300 S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DA(P8):DT(T5) chainA (320) SER322 0 0 0 0 0 0 1 0 (322) ASN324 0 0 0 0 0 0 0 1 (380) ARG382 0 5 5 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m83_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH DA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 0 S organism=Homo sapiens DNA sequence DT(T5):DA(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 1 0 0 0 0 0 0 (322) ASN324 1 0 0 0 0 0 0 0 (380) ARG382 0 0 0 0 10 16 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m84_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH DA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 40 S organism=Homo sapiens DNA sequence DT(T5):DA(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 1 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m85_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH DA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 80 S organism=Homo sapiens DNA sequence DT(T5):DA(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 1 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m86_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH DA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 140 S organism=Homo sapiens DNA sequence DT(T5):DA(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (319) SER322 0 1 0 0 0 0 0 0 (321) ASN324 1 0 0 0 0 0 0 0 (379) ARG382 0 0 0 0 9 16 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgpvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m87_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH DA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 230 S organism=Homo sapiens DNA sequence DT(T5):DA(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (319) SER322 0 1 0 0 0 0 0 0 (321) ASN324 1 0 0 0 0 0 0 0 (379) ARG382 0 0 0 0 9 16 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgpvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m88_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH DA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 300 S organism=Homo sapiens DNA sequence DT(T6):DA(P8) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 0 0 0 0 0 0 (419) MET421 1 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgiqtewsppltMlflcatkfsas >7m89_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH RA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 0 S organism=Homo sapiens DNA sequence DC(T1) DA(T2) DT(T3) DT(T4) DT(T5) DT(T6) DG(T7) DA(T8) DC(T9) DG(T10) DC(T11) DT(T12) chainA ( 41) GLN38 0 0 1 5 0 0 0 0 0 0 0 0 ( 45) TRP42 0 60 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 4 0 0 0 0 0 0 0 0 0 ( 65) SER62 0 0 7 0 0 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (320) SER322 0 0 0 0 0 1 0 0 0 0 0 0 (322) ASN324 0 0 0 0 1 0 0 0 0 0 0 0 (324) PRO326 0 15 0 0 0 0 0 0 0 0 0 0 (327) THR329 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRSmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m8a_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH RA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 40 S organism=Homo sapiens DNA sequence DC(T1) DA(T2) DT(T3) DT(T4) DT(T5) DT(T6) DG(T7) DA(T8) DC(T9) DG(T10) DC(T11) DT(T12) chainA ( 41) GLN38 0 0 0 5 0 0 0 0 0 0 0 0 ( 45) TRP42 0 62 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 2 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 4 0 0 0 0 0 0 0 0 0 ( 65) SER62 0 0 7 0 0 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (320) SER322 0 0 0 0 0 1 0 0 0 0 0 0 (322) ASN324 0 0 0 0 1 0 0 0 0 0 0 0 (324) PRO326 0 14 0 0 0 0 0 0 0 0 0 0 (327) THR329 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRSmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m8b_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH RA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 140 S organism=Homo sapiens DNA sequence DC(T1) DA(T2) DT(T3) DT(T4) DT(T5) DT(T6) DG(T7) DA(T8) DC(T9) DG(T10) DC(T11) DT(T12) chainA ( 41) GLN38 0 0 1 7 0 0 0 0 0 0 0 0 ( 45) TRP42 0 57 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 1 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 4 0 0 0 0 0 0 0 0 0 ( 65) SER62 0 0 6 0 0 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (320) SER322 0 0 0 0 1 1 0 0 0 0 0 0 (322) ASN324 0 0 0 0 1 0 0 0 0 0 0 0 (324) PRO326 0 15 0 0 0 0 0 0 0 0 0 0 (327) THR329 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRSmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m8c_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH RA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 230 S organism=Homo sapiens DNA sequence DC(T1) DA(T2) DT(T3) DT(T4) DT(T5) DT(T6) DG(T7) DA(T8) DC(T9) DG(T10) DC(T11) DT(T12) chainA ( 41) GLN38 0 0 1 7 0 0 0 0 0 0 0 0 ( 45) TRP42 0 57 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 1 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 4 0 0 0 0 0 0 0 0 0 ( 65) SER62 0 0 6 0 0 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (320) SER322 0 0 0 0 1 1 0 0 0 0 0 0 (322) ASN324 0 0 0 0 1 0 0 0 0 0 0 0 (324) PRO326 0 15 0 0 0 0 0 0 0 0 0 0 (327) THR329 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRSmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m8d_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POL ETA S113A WITH RA-ENDED PRIMER AND DATP: IN CRYSTALLO REACTION FOR 300 S organism=Homo sapiens DNA sequence DC(T1) DA(T2) DT(T3) DT(T4) DT(T5) DT(T6) DG(T7) DA(T8) DC(T9) DG(T10) DC(T11) DT(T12) chainA ( 41) GLN38 0 0 0 5 0 0 0 0 0 0 0 0 ( 45) TRP42 0 60 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 2 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 4 0 0 0 0 0 0 0 0 0 ( 65) SER62 0 0 7 0 0 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (320) SER322 0 0 0 0 0 1 0 0 0 0 0 0 (322) ASN324 0 0 0 0 1 0 0 0 0 0 0 0 (324) PRO326 0 14 0 0 0 0 0 0 0 0 0 0 (327) THR329 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRSmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavieraaideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7m8e_CD: title=E.COLI RNAP-RAPA ELONGATION COMPLEX organism=ESCHERICHIA COLI DNA sequence DC(178):DG(211) DA(179):DT(210) DG(180):DC(29) DA(181):DT(28) DC(182):DG(27) DG(183):DC(26) DC(184):DG(25) DG(185):DC(24) DG(186):DC(23) DC(187):DG(22) DG(188):DC(21) chainC (539) GLU541 3 0 0 0 0 0 0 0 0 0 0 (540) ARG542 8 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriTEyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >7mbm_GHIJKLMN: title=CRYO-EM STRUCTURE OF MLL1-NCP (H3K4M) COMPLEX, MODE01 organism=XENOPUS LAEVIS DNA sequence DT(O2):DA(P146) DC(O3):DG(P145) DG(O4):DC(P144) DG(O5):DC(P143) DA(O6):DT(P142) DT(O7):DA(P141) DG(O8):DC(P140) DT(O9):DA(P139) DA(O10):DT(P138) DT(O11):DA(P137) DA(O12):DT(P136) DT(O13):DA(P135) DA(O14):DT(P134) DT(O15):DA(P133) DC(O16):DG(P132) DT(O17):DA(P131) DG(O18):DC(P130) DA(O19):DT(P129) DC(O20):DG(P128) DA(O21):DT(P127) DC(O22):DG(P126) DG(O23):DC(P125) DT(O24):DA(P124) DG(O25):DC(P123) DC(O26):DG(P122) DC(O27):DG(P121) DT(O28):DA(P120) DG(O29):DC(P119) DG(O30):DC(P118) DA(O31):DT(P117) DG(O32):DC(P116) DA(O33):DT(P115) DC(O34):DG(P114) DT(O35):DA(P113) DA(O36):DT(P112) DG(O37):DC(P111) DG(O38):DC(P110) DG(O39):DC(P109) DA(O40):DT(P108) DG(O41):DC(P107) DT(O42):DA(P106) DA(O43):DT(P105) DA(O44):DT(P104) DT(O45):DA(P103) DC(O46):DG(P102) DC(O47):DG(P101) DC(O48):DG(P100) DC(O49):DG(P99) DT(O50):DA(P98) DT(O51):DA(P97) DG(O52):DC(P96) DG(O53):DC(P95) DC(O54):DG(P94) DG(O55):DC(P93) DG(O56):DC(P92) DT(O57):DA(P91) DT(O58):DA(P90) DA(O59):DT(P89) DA(O60):DT(P88) DA(O61):DT(P87) DA(O62):DT(P86) DC(O63):DG(P85) DG(O64):DC(P84) DC(O65):DG(P83) DG(O66):DC(P82) DG(O67):DC(P81) DG(O68):DC(P80) DG(O69):DC(P79) DG(O70):DC(P78) DA(O71):DT(P77) DC(O72):DG(P76) DA(O73):DT(P75) DG(O74):DC(P74) DC(O75):DG(P73) DG(O76):DC(P72) DC(O77):DG(P71) DG(O78):DC(P70) DT(O79):DA(P69) DA(O80):DT(P68) DC(O81):DG(P67) DG(O82):DC(P66) DT(O83):DA(P65) DG(O84):DC(P64) DC(O85):DG(P63) DG(O86):DC(P62) DT(O88):DA(P61) DT(O89):DA(P59) DA(O90):DT(P58) DA(O91):DT(P57) DG(O92):DC(P56) DC(O93):DG(P55) DG(O94):DC(P54) DG(O95):DC(P53) DT(O96):DA(P52) DG(O97):DC(P51) DC(O98):DG(P50) DT(O99):DA(P49) DA(O100):DT(P48) DG(O101):DC(P47) DA(O102):DT(P46) DG(O103):DC(P45) DC(O104):DG(P44) DT(O105):DA(P43) DG(O106):DC(P42) DT(O107):DA(P41) DC(O108):DG(P40) DT(O109):DA(P39) DA(O110):DT(P38) DC(O111):DG(P37) DG(O112):DC(P36) DA(O113):DT(P35) DC(O114):DG(P34) DC(O115):DG(P33) DA(O116):DT(P32) DA(O117):DT(P31) DT(O118):DA(P30) DT(O119):DA(P29) DG(O120):DC(P28) DA(O121):DT(P27) DG(O122):DC(P26) DC(O123):DG(P25) DG(O124):DC(P24) DG(O125):DC(P23) DC(O126):DG(P22) DC(O127):DG(P21) DT(O128):DA(P20) DC(O129):DG(P19) DG(O130):DC(P18) DG(O131):DC(P17) DC(O132):DG(P16) DA(O133):DT(P15) DC(O134):DG(P14) DC(O135):DG(P13) DG(O136):DC(P12) DG(O137):DC(P11) DG(O138):DC(P10) DA(O139):DT(P9) DT(O140):DA(P8) DT(O141):DA(P7) DC(O142):DG(P6) DT(O143):DA(P5) DC(O144):DG(P4) DG(O145):DC(P3) DA(O146):DT(P2) chainG ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH chainI chainJ chainK ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL chainM chainN prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/lrDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/raKaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/rkTrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/dnIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kaKtrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7mbn_M:Histone-fold; title=CRYO-EM STRUCTURE OF MLL1-NCP (H3K4M) COMPLEX, MODE02 organism=? DNA sequence DA(P1):DT(O147) DT(P2):DA(O146) DC(P3):DG(O145) DG(P4):DC(O144) DG(P5):DC(O143) DA(P6):DT(O142) DT(P7):DA(O141) DG(P8):DC(O140) DT(P9):DA(O139) DA(P10):DT(O138) DT(P11):DA(O137) DA(P12):DT(O136) DT(P13):DA(O135) DA(P14):DT(O134) DT(P15):DA(O133) DT(P17):DG(O132) DG(P18):DC(O130) DA(P19):DT(O129) DC(P20):DG(O128) DA(P21):DT(O127) DC(P22):DG(O126) DG(P23):DC(O125) DT(P24):DA(O124) DG(P25):DC(O123) DC(P26):DG(O122) DC(P27):DG(O121) DT(P28):DA(O120) DG(P29):DC(O119) DG(P30):DC(O118) DA(P31):DT(O117) DG(P32):DC(O116) DA(P33):DT(O115) DC(P34):DG(O114) DT(P35):DA(O113) DA(P36):DT(O112) DG(P37):DC(O111) DG(P38):DC(O110) DG(P39):DC(O109) DA(P40):DT(O108) DG(P41):DC(O107) DT(P42):DA(O106) DA(P43):DT(O105) DA(P44):DT(O104) DT(P45):DA(O103) DC(P46):DG(O102) DC(P47):DG(O101) DC(P48):DG(O100) DC(P49):DG(O99) DT(P51):DA(O98) DG(P52):DC(O96) DG(P53):DC(O95) DC(P54):DG(O94) DG(P55):DC(O93) DG(P56):DC(O92) DT(P57):DA(O91) DT(P58):DA(O90) DA(P59):DT(O89) DA(P60):DT(O88) DA(P61):DT(O87) DA(P62):DT(O86) DC(P63):DG(O85) DG(P64):DC(O84) DC(P65):DG(O83) DG(P66):DC(O82) DG(P67):DC(O81) DG(P68):DC(O80) DG(P69):DC(O79) DG(P70):DC(O78) DA(P71):DT(O77) DC(P72):DG(O76) DA(P73):DT(O75) DG(P74):DC(O74) DC(P75):DG(O73) DG(P76):DC(O72) DC(P77):DG(O71) DG(P78):DC(O70) DT(P79):DA(O69) DA(P80):DT(O68) DC(P81):DG(O67) DG(P82):DC(O66) DT(P83):DA(O65) DG(P84):DC(O64) DC(P85):DG(O63) DG(P86):DC(O62) DT(P87):DA(O60) DT(P89):DA(O59) DA(P90):DT(O58) DA(P91):DT(O57) DG(P92):DC(O56) DC(P93):DG(O55) DG(P94):DC(O54) DG(P95):DC(O53) DT(P96):DA(O52) DG(P97):DC(O51) DC(P98):DG(O50) DT(P99):DA(O49) DA(P100):DT(O48) DG(P101):DC(O47) DA(P102):DT(O46) DG(P103):DC(O45) DC(P104):DG(O44) DT(P105):DA(O43) DG(P106):DC(O42) DT(P107):DA(O41) DC(P108):DG(O40) DT(P109):DA(O39) DA(P110):DT(O38) DC(P111):DG(O37) DG(P112):DC(O36) DA(P113):DT(O35) DC(P114):DG(O34) DC(P115):DG(O33) DA(P116):DT(O32) DA(P117):DT(O31) DT(P118):DA(O30) DT(P119):DA(O29) DG(P120):DC(O28) DA(P121):DT(O27) DG(P122):DC(O26) DC(P123):DG(O25) DG(P124):DC(O24) DG(P125):DC(O23) DC(P126):DG(O22) DC(P127):DG(O21) DT(P128):DA(O20) DC(P129):DG(O19) DG(P130):DC(O18) DG(P131):DC(O17) DC(P132):DG(O16) DA(P133):DT(O15) DC(P134):DG(O14) DC(P135):DG(O13) DG(P136):DC(O12) DG(P137):DC(O11) DG(P138):DC(O10) DA(P139):DT(O9) DT(P140):DA(O8) DT(P141):DA(O7) DC(P142):DG(O6) DT(P143):DA(O5) DC(P144):DG(O4) DG(P145):DC(O3) chainM ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >7mca_ABCDEFI:P-loop_containing_nucleoside_triphosphate_hydrolases;Inhibitor_of_apoptosis_IAP_repeat;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE S. CEREVISIAE ORIGIN RECOGNITION COMPLEX BOUND TO THE REPLICATION INITIATOR CDC6 AND THE ARS1 ORIGIN DNA. organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(H32):DT(G54) DG(H33):DC(G53) DG(H34):DC(G52) DC(H35):DG(G51) DC(H36):DG(G50) DT(H37):DA(G49) DT(H38):DA(G48) DT(H39):DA(G47) DT(H40):DA(G46) DG(H41):DC(G45) DA(H42):DT(G44) DA(H43):DT(G43) DA(H44):DT(G42) DA(H45):DT(G41) DG(H46):DC(G40) DC(H47):DG(G39) DA(H48):DT(G38) DA(H49):DT(G37) DG(H50):DC(G36) DC(H51):DG(G35) DA(H52):DT(G34) DT(H53):DA(G33) DA(H54):DT(G32) DA(H55):DT(G31) DA(H56):DT(G30) DA(H57):DT(G29) DG(H58):DC(G28) DA(H59):DT(G27) DT(H60):DA(G26) DC(H61):DG(G25) DT(H62):DA(G24) DA(H63):DT(G23) DA(H64):DT(G22) DA(H65):DT(G21) DC(H66):DG(G20) DA(H67):DT(G19) DT(H68):DA(G18) DA(H69):DT(G17) DA(H70):DT(G16) DA(H71):DT(G15) DA(H72):DT(G14) DT(H73):DA(G13) DC(H74):DG(G12) DT(H75):DA(G11) DG(H76):DC(G10) DT(H77):DA(G9) DA(H78):DT(G8) DA(H79):DT(G7) DA(H80):DT(G6) DA(H81):DT(G5) chainA ( 6) PHE360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) LYS362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ARG367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 0 0 ( 18) TYR372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 2 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) TRP396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD (394) PHE485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) TYR486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (398) ASN489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) TYR490 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (326) ARG344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) ARG360 0 0 0 0 0 0 0 0 0 2 7 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) TYR363 0 0 0 0 0 0 0 0 0 0 1 5 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ARG366 0 0 0 0 0 0 0 0 0 0 0 0 2 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) LYS439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 10) LYS276 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) TYR277 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI prot.sequence pvirkFtKknvaRakkkYtpfskrfksiaaipdltslpefygnsselmasrfenklkttqkhqivetifskvkkqlnssylparenefasiylsaysaiesdsattiyvagtpgvgktltvrevvkellsssaqreipdflyveinglkmvkptdcyetlwnkvsgerltwaasmeslefyfkrvpknkkktivvlldeldamvtksqdimynffnwttyenakliviavantmdlperqlgnkitsrigftrimftgytheelkniidlrlkglndsffyvdtktgnailidvrkvrlrmsadaieiasrkvasvsgdarralkvckraaeiaekhymakhgygydgvqtvhithvmkalnetlnshvitfmtrlsftaklfiyallnlmkkngsqeqelgdivdeikllievngsnkfvmeiaktlfqqgsdniseqlriiswdfvlnqlldagilfkqtmkndriccvklnisveeakramnedetlrnl/tksassfldtfegyfdqrkivRtnaksrhtmsmapdvtreefslvsnffnenfqkrprqklfeiqkkmfpqywfeltqgfsllfygvgskrnfleefaidylspkiaysqlnsipclilngynpscnyrdvfkeitdllvpaeltrsetkyWgnhvilqiqkmidfyknqpldiklilvvhnldgpsirkntfqtmlsflsvirqiaivastdhiyapllwdnmkaqnynfvfhdisnfepstvestfqdvmk/fadaqrshytvypslpqsnknDkhipfvkllsgkesevnvekrwelyhqlhshfhdqvdhiidnieadlkaeisdllysettqkrrcfntifllgsdsttkielkdessrynvlieltpkespnvrmmlrrsmyklysaadaeehnndvsyDlslvenfkrlfgkdlamvfnfkdvdsinfntldnfiillksafkydhvkislifnintnlsnieknlrqstirllkrnyhkldvssnkgfkygnqifqsfldtvdgklnlsdrfvefilskmanntnhnlqlltkmldyslmsyffqnafsvfidpvnvdflnddylkilsrcptfmffveglikqhapadeilslltnknrgleeffveflvrenpinghakfvarfleeelnitnfnlielyhnlligkldsyldrwsackeykdrlhfepidtifqelftldnrsglltqsifpsyksniednllsweqvlpsldkenydtlsgdldkimapvlgqlfklyreanmtiniydfyiafretlpkeeilnfirkdpsntkllelaetpdafdkvalilfmqaifafenmglikfqstksydlvekcvwrgi/dpgfgslqrrllqqlygtlptdekiiftylqdcqqeidriikqsiiqkeshsvilvgprqsyktylldyelsllqqsykeqfitirlngfihseqtaingiatqleqqlqkihtissgsltevfekilllldssitkitvvfifdeidtfagpvrqtllynlfdmvehsrvpvcifgcttklnileylekrvksrfsqrviympqiqnlddmvdavrnlltvrseispwvsqwnetlekelsdprsnlnrhirmnfetfrslptlknsiiplvatsknfgslctaikscsfldiynknqlsnnltgrlqslsdlelailisaarvalrakdgsfnfnlayaeyekmikainsrintiklwlkkdvknvwenlvqldffteksavglrdnataaFYasNYqfqgtmipfdlrsyqmqiilqelrriipksnmyyswtql/mnvttpevafreyqtnclasyisadpditpsnlilqgysgtgktytlkkyfnanpnlhavwlepvelvswkpllqaiartvqyklktlypnipttdydplqveepfllvktlhnifvqyeslqektclflildgfdslqdldaalfnkyiklnellpkdskinikfiytmletsflqrysthciptvmfprynvdevstilvmsrcgelmedsclrkriieeqitdctddqfqnvaanfihlivqafhsytgndifalndlidfkwpkyvsritkenifeplalyksaiklflstddnlssqtydlsiiskylliasyicsylepRydasifsrktriiqgRaaYgrRkkkevnprylqpslfaierllaifqaifpiqgalreeslmkanievfqnlselhtlkliattmnKnidylspkvrwkvnvpweiikeisesvhfnisdyfsdih/ripnsllvkKYckmtteeiirlcndfelprevaykivdeyninasrlvcpwqlvcglvlnctfivfnerrrkdpridhfivskmcslmltskvddviecvklvkeliigekwfrdlqiryddfdgirydeiifrklgsmlqttnilvtddqyniwkkriemdla/allqksselVNlnartaeyeqvmnflakaisehrsdslyitgppgtgktaqldmiirqkfqslesvavtsincislgepssifqkifdsfqdlngptlqiknmqhlqkflepyhkkttfvvvldemdrllhantsetqsvrtilelfllaklptvsfvligmansldmkdrflsrlnldrgllpqtivfqpytaeqmyeiviqkmsslptiifqpmaikfaakkcagntgdlrklfdvlrgsieiyelekgkiglnyiakvfskfvnnnstrtriaklniqqklilctiiqslklnsdatidesfdhyikaitkaplqrnefleictiletcglvsikktkckgktkrfvdkidvdldmrefydemtkisilkpfl >7mcs_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-ELECTRON MICROSCOPY STRUCTURE OF TNSC(1-503)A225V BOUND TO DNA organism=ESCHERICHIA COLI DNA sequence DC(H1):DG(I15) DG(H2):DC(I14) DC(H3):DG(I13) DG(H4):DC(I12) DC(H5):DG(I11) DG(H6):DC(I10) DC(H7):DG(I9) DG(H8):DC(I8) DC(H9):DG(I7) DG(H10):DC(I6) DC(H11):DG(I5) DG(H12):DC(I4) DC(H13):DG(I3) DG(H14):DC(I2) DC(H15):DG(I1) chainA (161) ARG207 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 chainB chainC chainD chainE (204) ARG207 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainF (203) ARG207 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence triqavyrdtgveayrdnpfiealpplqthlllserisvmirggyvgrnpktgdlqkhlqngyervqtgeletfrfeearstaqsllligcsgsgkttslhrilatypqviyhrelnveqvvylkidcshngslkeiclnffraldralgsnyerryglkRhgietmlalmsqianahvlgllvideiqhlsrsrsggsqemlnffvtmvniigvpvmligtpkareifeadlrsarrgagfgaifwdp/riqavyrdtgveayrdnpfiealpplqesvnsaaslksslqltssdlqksrvirahticripddyfqplgthlllserisvmirggyvgrnpktgdlqkhlqngyervqtgeletfrfeearstaqsllligcsgsgkttslhrilatypqviyhrelnvEqvvylkidcshngslkeiclnffraldralgsnyerryglkrhgietmlalmsqianahvlgllvideiqhlsrsrsggsqemlnffvtmvniigvpvmligtpkareifeadlrsarrgagfgaifwdpiqqtqrgkpnqewiaftdnlwqlqllqrkdallsdevrdvwyelsqgvmdivvklfvlaqlralalgneritagllrqvyqdelkpvhpmlealrsgiperiarysdlvvp/atriqavyrdtgveayrdnpfiealpplqesvnsaaslksslqltssdlqksrvirahticripddyfqplgthlllserisvmirggyvgrnpktgdlqkhlqngyervqtgeletfrfeearstaqsllligcsgsgkttslhrilatypqviyhrelNveqvvylkidcshngslkeiclnffraldralgsnyerryglkrhgietmlalmsqianahvlgllvideiqhlsrsrsggsqemlnffvtmvniigvpvmligtpkareifeadlrsarrgagfgaifwdpiqqtqrgkpnqewiaftdnlwqlqllqrkdallsdevrdvwyelsqgvmdivvklfvlaqlralalgneritagllrqvyqdelkpvhpmlealrsgiperiarysdlvvp/atriqavyrdtgveayrdnpfiealpplqesvnsaaslksslqltssdlqksrvirahticripddyfqplgthlllserisvmirggyvgrnpktgdlqkhlqngyervqtgeletfrfeearstaqsllligcsgsgkttslhrilatypqviyhrelNveqvvylkidcshngslkeiclnffraldralgsnyerryglkrhgietmlalmsqianahvlgllvideiqhlsrsrsggsqemlnffvtmvniigvpvmligtpkareifeadlrsarrgagfgaifwdpiqqtqrgkpnqewiaftdnlwqlqllqrkdallsdevrdvwyelsqgvmdivvklfvlaqlralalgneritagllrqvyqdelkpvhpmlealrsgiperiarysdlvv/triqavyrdtgveayrdnpfiealpplqesvnsaaslksslqltssdlqksrvirahticripddyfqplgthlllserisvmirggyvgrnpktgdlqkhlqngyervqtgeletfrfeearstaqsllligcsgsgkttslhrilatypqviyhrelnveqvvylkidcshngslkeiclnffraldralgsnyerryglkRhgietmlalmsqianahvlgllvideiqhlsrsrsggsqemlnffvtmvniigvpvmligtpkareifeadlrsarrgagfgaifwdpiqqtqrgkpnqewiaftdnlwqlqllqrkdallsdevrdvwyelsqgvmdivvklfvlaqlralalgneritagllrqvyqdelkpvhpmlealrsgiperiarysdlvv/riqavyrdtgveayrdnpfiealpplqesvnsaaslksslqltssdlqksrvirahticripddyfqplgthlllserisvmirggyvgrnpktgdlqkhlqngyervqtgeletfrfeearstaqsllligcsgsgkttslhrilatypqviyhrelnveqvvylkidcshngslkeiclnffraldralgsnyerryglkRhgietmlalmsqianahvlgllvideiqhlsrsrsggsqemlnffvtmvniigvpvmligtpkareifeadlrsarrgagfgaifwdpiqqtqrgkpnqewiaftdnlwqlqllqrkdallsdevrdvwyelsqgvmdivvklfvlaqlralalgneritagllrqvyqdelkpvhpmlealrsgiperiarysdlvv >7mcs_F:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-ELECTRON MICROSCOPY STRUCTURE OF TNSC(1-503)A225V BOUND TO DNA organism=ESCHERICHIA COLI DNA sequence DG(I1):DC(H15) DC(I2):DG(H14) DG(I3):DC(H13) DC(I4):DG(H12) DG(I5):DC(H11) DC(I6):DG(H10) DG(I7):DC(H9) DC(I8):DG(H8) DG(I9):DC(H7) DC(I10):DG(H6) DG(I11):DC(H5) DC(I12):DG(H4) DG(I13):DC(H3) DC(I14):DG(H2) DG(I15):DC(H1) chainF (203) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 prot.sequence riqavyrdtgveayrdnpfiealpplqesvnsaaslksslqltssdlqksrvirahticripddyfqplgthlllserisvmirggyvgrnpktgdlqkhlqngyervqtgeletfrfeearstaqsllligcsgsgkttslhrilatypqviyhrelnveqvvylkidcshngslkeiclnffraldralgsnyerryglkRhgietmlalmsqianahvlgllvideiqhlsrsrsggsqemlnffvtmvniigvpvmligtpkareifeadlrsarrgagfgaifwdpiqqtqrgkpnqewiaftdnlwqlqllqrkdallsdevrdvwyelsqgvmdivvklfvlaqlralalgneritagllrqvyqdelkpvhpmlealrsgiperiarysdlvv >7mga_A:Concanavalin_A-like_lectins/glucanases; title=CONCANAVALIN A BOUND TO A DNA GLYCOCONJUGATE, MAN-AAATTT organism=CANAVALIA ENSIFORMIS DNA sequence DA(C1) DA(C2) DA(C3) DT(C4) DT(C5) DT(C6) chainA (199) HIS205 2 0 0 0 0 0 prot.sequence adtivaveldtypntdigdpsyphigidiksvrskktakwnmqngkvgtahiiynsvdkrlsavvsypnadsatvsydvdldnvlpewvrvglsastglyketntilswsftsklktnalhfmfnqfskdqkdlilqgdattgtdgnleltrvssngspqgssvgralfyapvhiwessavvasfeatftflikspdsHpadgiaffisnidssipsgstgrllglfpdan >7mht_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/DNA COMPLEX organism=Haemophilus haemolyticus DNA sequence DC(D422):DG(C413) DC(D423):DG(C412) DA(D424):DT(C411) DT(D425):DA(C410) DG(D426):DC(C409) DA(D427):DG(C408) DG(D428):DC(C407) DC(D429):DG(C406) DT(D430):DA(C405) DG(D431):DC(C404) DA(D432):DT(C403) DC(D433):DG(C402) chainA ( 81) CYS81 0 0 0 0 0 12 0 0 0 0 0 0 ( 86) ILE86 0 0 1 3 2 0 0 0 0 0 0 0 ( 87) SER87 0 0 0 0 12 0 5 0 0 0 0 0 (119) GLU119 0 0 0 0 0 13 0 0 0 0 0 0 (120) ASN120 0 0 0 0 0 2 0 0 0 0 0 0 (121) VAL121 0 0 0 0 0 5 0 0 0 0 0 0 (163) ARG163 0 0 0 0 0 3 0 0 0 0 0 0 (165) ARG165 0 0 0 0 0 8 0 0 0 0 0 0 (228) ARG228 0 0 0 1 0 0 0 0 0 0 0 0 (237) GLN237 0 0 0 0 50 17 23 0 0 0 0 0 (240) ARG240 0 0 0 9 20 0 0 0 0 0 0 0 (304) ASN304 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpCqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmENVknfashdngntlevvkntmneldysfhakvlnaldygipqkReRiymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgeRiystrgiaitlsaygggifaktggylvngktrklhprecarvmgypdsykvhpstsqaykqfgNsvvinvlqyiaynigsslnfkpy >7mi4_ABCDEF: title=SYMMETRICAL PAM-PAM PRESPACER BOUND CAS4/CAS1/CAS2 COMPLEX organism=GEOBACTER SULFURREDUCENS DNA sequence DC(G3):DG(H24) DG(G4):DC(H23) DT(G5):DA(H22) DA(G6):DT(H21) DG(G7):DC(H20) DC(G8):DG(H19) DT(G9):DA(H18) DG(G10):DC(H17) DA(G11):DT(H16) DG(G12):DC(H15) DG(G13):DC(H14) DC(G14):DG(H13) DC(G15):DG(H12) DT(G16):DA(H11) DC(G17):DG(H10) DA(G18):DT(H9) DG(G19):DC(H8) DC(G20):DG(H7) DT(G21):DA(H6) DA(G22):DT(H5) DC(G23):DG(H4) DG(G24):DC(H3) chainA chainB ( 11) PRO229 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) LYS230 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN265 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) TYR288 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 11) PRO229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 12) LYS230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 47) ASN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 ( 70) TYR288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 chainE ( 14) GLN14 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TRP17 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 14) GLN14 0 0 0 0 0 0 0 0 0 0 0 0 1 8 2 1 0 0 0 0 0 0 ( 17) TRP17 0 0 0 0 0 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 prot.sequence dgsiplipvrmlnehvycprlaylmwvqgefshneftvdgvirhrrvdagggvlpsetqedsriharsvslsserlgitakidlvegegayvspvdykrgkrphvaggayepervqlcaqglllrehgfasdggalyfvasrervpvafddeligrtlaaidemgrtalsgtmpppledspkcprcslvgiclpdevrflshlsveprpiipadgrglplyvqspkayvrkdgdclvieeervrvaearlgetsqvalfgnatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt/grglplyvqsPKayvrkdgdclvieeervrvaearlgetsqvalfgNatlttaalheclrreipvtwlsYggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt/dgsiplipvrMLnehvycprlaylmwvqgefshneftvdgvirhrrVdagggvlpsetqedsriharsvSlsserlgitakidlvegegayvspvdykrgkrphvaggayepervqlcaqglllrehgfasdggalyfvasrervpvafddeligrtlaaidemgrtalsgtmpppledspkcprcslvgiclpdevrflshlsveprpiipadgrglplyvqspkayvrkdgdclvieeervrvaearlgetsqvalfgnatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt/grglplyvqsPKayvrkdgdclvieeervrvaearlgetsqvalfgNatlttaalheclrreipvtwlsYggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt/mehlyivsydirnQrrWRrlfktmhgfgcwlqlsvfqcrldririikmeaaineivnhaedhvlildlgpaenvkpkvssigktfdpilrqaviv/mehlyivsydirnQrrWRrlfktmhgfgcwlqlsvfqcrldririikmeaaineivnhaedhvlildlgpaenvkpkvssigktfdpilrqaviv >7mi5_A: title=ASYMMETRICAL PAM-NON PAM PRESPACER BOUND CAS4/CAS1/CAS2 COMPLEX organism=? DNA sequence DC(G3):DG(H23) DA(G5):DT(H22) DT(G6):DA(H21) DC(G7):DG(H20) DG(G8):DC(H19) DT(G9):DA(H18) DG(G10):DC(H17) DA(G11):DT(H16) DG(G12):DC(H15) DG(G13):DC(H14) DC(G14):DG(H13) DC(G15):DG(H12) DT(G16):DA(H11) DC(G17):DG(H10) DA(G18):DT(H9) DG(G19):DC(H8) DC(G20):DG(H7) DT(G21):DA(H6) DA(G22):DT(H5) DC(G23):DG(H4) DG(G24):DC(H3) chainA (229) ARG234 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gsiplipvrmlnehvycprlaylmwvqgefshneftvdgvirhrrvdagggvlpsetqedsriharsvslsserlgitakidlvegegayvspvdykrgkrphvaggayepervqlcaqglllrehgfasdggalyfvasrervpvafddeligrtlaaidemgrtalsgtmpppledspkcprcslvgiclpdevrflshlsveprpiipadgrglplyvqspkayvRkdgdclvieeervrvaearlgetsqvalfgnatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt >7mi5_ABCDEF: title=ASYMMETRICAL PAM-NON PAM PRESPACER BOUND CAS4/CAS1/CAS2 COMPLEX organism=GEOBACTER SULFURREDUCENS DNA sequence DC(H3):DG(G24) DG(H4):DC(G23) DT(H5):DA(G22) DA(H6):DT(G21) DG(H7):DC(G20) DC(H8):DG(G19) DT(H9):DA(G18) DG(H10):DC(G17) DA(H11):DT(G16) DG(H12):DC(G15) DG(H13):DC(G14) DC(H14):DG(G13) DC(H15):DG(G12) DT(H16):DA(G11) DC(H17):DG(G10) DA(H18):DT(G9) DC(H19):DG(G8) DG(H20):DC(G7) DA(H21):DT(G6) DT(H22):DA(G5) DG(H23):DC(G3) chainA (229) ARG234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainB ( 12) LYS230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 ( 27) GLU245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 chainC chainD ( 11) PRO229 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) LYS230 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ASN265 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 17) TRP17 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 chainF ( 14) GLN14 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TRP17 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gsiplipvrmlnehvycprlaylmwvqgefshneftvdgvirhrrvdagggvlpsetqedsriharsvslsserlgitakidlvegegayvspvdykrgkrphvaggayepervqlcaqglllrehgfasdggalyfvasrervpvafddeligrtlaaidemgrtalsgtmpppledspkcprcslvgiclpdevrflshlsveprpiipadgrglplyvqspkayvRkdgdclvieeervrvaearlgetsqvalfgnatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt/grglplyvqspKayvrkdgdclvieeErvrvaearlgetsqvalfgnatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt/lpdevrflshlSveprpiipadgrglPlyvqspkayvrkdgdclvieeervrvaearlgetsqvalfgnatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt/grglplyvqsPKayvrkdgdclvieeervrvaearlgetsqvalfgNatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt/mehlyivsydirnqrrWRrlfktmhgfgcwlqlsvfqcrldririikmeaaineivnhaedhvlildlgpaenvkpkvssigktfdpilrqaviv/mehlyivsydirnQrrWRrlfktmhgfgcwlqlsvfqcrldririikmeaaineivnhaedhvlildlgpaenvkpkvssigktfdpilrqaviv >7mi9_ACEF: title=FULL INTEGRATION COMPLEX OF CAS1/CAS2 FROM CAS4-CONTAINING SYSTEM organism=GEOBACTER SULFURREDUCENS DNA sequence DT(H20):DG(G80) DT(H21):DC(G79) DG(H22):DC(G78) DT(H23):DT(G77) DC(H24):DT(G76) DG(H25):DT(G75) DA(H26):DT(G74) DT(H27):DC(G73) DT(H28):DT(G72) DT(H29):DC(G71) DT(H30):DG(G70) DT(H31):DG(G69) DG(H32):DC(G68) DT(H33):DA(G67) DA(H34):DT(G66) DT(H35):DA(G65) DT(H36):DA(G64) DC(H37):DG(G63) DC(H38):DG(G62) DG(H39):DC(G61) DG(H40):DC(G60) DG(H41):DC(G59) DG(H42):DC(G58) DC(H43):DG(G57) DC(H44):DG(G56) DA(H45):DT(G55) DT(H46):DA(G54) DG(H47):DC(G53) DA(H48):DT(G52) DT(H49):DA(G51) DG(H50):DC(G50) DC(H51):DG(G49) DC(H52):DG(G48) DC(H53):DG(G47) DC(H54):DG(G46) DG(H55):DC(G45) DG(H56):DC(G44) DC(H57):DG(G43) DC(H58):DG(G42) DT(H59):DA(G41) DC(H60):DG(G40) DA(H61):DT(G39) DT(H62):DA(G38) DT(H63):DA(G37) DG(H64):DC(G36) DA(H65):DT(G35) DA(H66):DT(G34) DG(H67):DC(G33) DC(H68):DG(G32) DG(H69):DT(G31) DG(H70):DT(G30) DC(H71):DT(G29) DT(H72):DT(G28) DT(H73):DT(G27) DC(H74):DC(G26) chainA ( 4) ILE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ILE215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 59) ARG278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 83) ARG302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 chainE chainF prot.sequence prpIIpadgrglplyvqspkayvrkdgdclvieeervrvaearlgetsqvalfgnatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt/rglplyvqspkayvrkdgdclvieeervrvaearlgetsqvalfgnatlttaalheclRreipvtwlsyggwfmghtvstghRnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt/mehlyivsydirnqrrwrrlfktmhgfgcwlqlsvfqcrldririikmeaaineivnhAedhvlildlgpaenvkpkvssigKtfdpilrqaviv/mehlyivsydirnqrrwrrlfktmhgfgcwlqlsvfqcrldririikmeaaineivnhAedhvlildlgpaenvkpkvssigKtfdpilrqaviv >7mi9_BD: title=FULL INTEGRATION COMPLEX OF CAS1/CAS2 FROM CAS4-CONTAINING SYSTEM organism=GEOBACTER SULFURREDUCENS DNA sequence DG(h12):DC(g86) DT(h13):DC(g85) DA(h14):DG(g84) DA(h15):DA(g83) DC(h16):DA(g82) DG(h17):DG(g81) DT(h18):DG(g80) DT(h19):DC(g79) DG(h20):DC(g78) DT(h21):DT(g77) DC(h22):DT(g76) DG(h23):DT(g75) DA(h24):DT(g74) DT(h25):DC(g73) DT(h26):DT(g72) DT(h27):DC(g71) DT(h28):DG(g70) DT(h29):DG(g69) DG(h30):DC(g68) DT(h31):DA(g67) DA(h32):DT(g66) DT(h33):DA(g65) DT(h34):DA(g64) DC(h35):DG(g63) DC(h36):DG(g62) DG(h37):DC(g61) DG(h38):DC(g60) DG(h39):DC(g59) DG(h40):DC(g58) DC(h41):DG(g57) DC(h42):DG(g56) DA(h43):DT(g55) DT(h44):DA(g54) DG(h45):DC(g53) DA(h46):DT(g52) DT(h47):DA(g51) DG(h48):DC(g50) DC(h49):DG(g49) DC(h50):DG(g48) DC(h51):DG(g47) DC(h52):DG(g46) DG(h53):DC(g45) DG(h54):DC(g44) DC(h55):DG(g43) DC(h56):DG(g42) DT(h57):DA(g41) DC(h58):DG(g40) DA(h59):DT(g39) DT(h60):DA(g38) DT(h61):DA(g37) DG(h62):DC(g36) DA(h63):DT(g35) DA(h64):DT(g34) DG(h65):DC(g33) DC(h66):DG(g32) DG(h67):DT(g31) DG(h68):DT(g30) DC(h69):DT(g29) DT(h70):DT(g28) DT(h71):DT(g27) DC(h72):DC(g26) DC(h73):DC(g25) DG(h74):DG(g24) DG(h75):DA(g23) DA(h76):DC(g22) DA(h77):DA(g21) DA(h78):DC(g20) DA(h79):DG(g19) DG(h80):DG(g18) DA(h81):DC(g17) DG(h82):DA(g16) DC(h83):DG(g15) DC(h84):DG(g14) chainB ( 67) SER287 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) TYR288 0 0 0 0 0 0 0 0 0 0 8 29 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) TRP291 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) LEU377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (162) ALA382 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (190) ARG410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) ARG412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) ARG413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) PHE425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (207) TYR427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) ALA428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) THR431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) ARG454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) PHE455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ARG457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) PRO458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) LEU462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) MET465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) ASN499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) LEU500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) ARG505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) LYS506 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 11) LYS230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 68) SER287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) TYR288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 ( 72) TRP291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) LEU377 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) PRO415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ALA421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) SER424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) PHE425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) ARG454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) PHE455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) ARG457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) PRO458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) LEU462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) ASN499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence glplyvqspkayvrkdgdclvieeervrvaearlgetsqvalfgnatlttaalheclrreipvtwlSYggWfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslEvlLgiegAsagryfqhfsrmlrggdgegmgfdfttRnRRppkdpvnallsFaYAmlTrewtvalaavgldpyrgfyhqpRFgRPalaLdmMepfRpliadstvlmainngeirtgdfvrsaggcNLtdsaRKrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt/rglplyvqspKayvrkdgdclvieeervrvaearlgetsqvalfgnatlttaalheclrreipvtwlSYggWfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevlLgiegasagryfqhfsrmlrggdgegmgfdfttrnrrpPkdpvnAllSFayamltrewtvalaavgldpyrgfyhqpRFgRPalaLdmmepfrpliadstvlmainngeirtgdfvrsaggcNltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt >7mid_ABCD:TTP0101/SSO1404-like; title=SUB-COMPLEX OF CAS4-CAS1-CAS2 BOUND PAM CONTAINING DNA organism=GEOBACTER SULFURREDUCENS DNA sequence DG(F4):DC(E23) DT(F5):DA(E22) DA(F6):DT(E21) DG(F7):DC(E20) DC(F8):DG(E19) DT(F9):DA(E18) DG(F10):DC(E17) DA(F11):DT(E16) DG(F12):DC(E15) DG(F13):DC(E14) DC(F14):DG(E13) DC(F15):DG(E12) DT(F16):DA(E11) DC(F17):DG(E10) DA(F18):DT(E9) DC(F19):DG(E8) DG(F20):DC(E7) DA(F21):DA(E5) DG(F23):DC(E4) DG(F24):DC(E3) chainA chainB ( 11) PRO229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 12) LYS230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 47) ASN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 ( 70) TYR288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 chainC ( 14) GLN14 0 0 0 0 0 0 0 0 0 0 0 1 4 0 2 0 0 0 0 0 ( 17) TRP17 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 chainD ( 14) GLN14 0 0 0 0 0 1 2 8 1 0 0 0 0 0 0 0 0 0 0 0 ( 17) TRP17 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dgsiplipvrmlnehvycprlaylmwvqgefshneftvdgvirhrrvdagggvlpsetqedsriharsvslsserlgitakidlvegegayvspvdykrgkrphvaggayepervqlcaqglllrehgfasdggalyfvasrervpvafddeligrtlaaidemgrtalsgtmpppledspkcprcslvgiclpdevrflshlsveprpiipadgrglplyvqspkayvrkdgdclvieeervrvaearlgetsqvalfgnatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt/grglplyvqsPKayvrkdgdclvieeervrvaearlgetsqvalfgNatlttaalheclrreipvtwlsYggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt/mehlyivsydirnQrrWRrlfktmhgfgcwlqlsvfqcrldririikmeaaineivnhaedhvlildlgpaenvkpkvssigktfdpilrqaviv/mehlyivsydirnQrrWRrlfktmhgfgcwlqlsvfqcrldririikmeaaineivnhaedhvlildlgpaenvkpkvssigktfdpilrq >7mid_D:TTP0101/SSO1404-like; title=SUB-COMPLEX OF CAS4-CAS1-CAS2 BOUND PAM CONTAINING DNA organism=GEOBACTER SULFURREDUCENS DNA sequence DG(F4):DC(E23) DT(F5):DA(E22) DA(F6):DT(E21) DG(F7):DC(E20) DC(F8):DG(E19) DT(F9):DA(E18) DG(F10):DC(E17) DA(F11):DT(E16) DG(F12):DC(E15) DG(F13):DC(E14) DC(F14):DG(E13) DC(F15):DG(E12) DT(F16):DA(E11) DC(F17):DG(E10) DA(F18):DT(E9) DC(F19):DG(E8) DG(F20):DC(E7) DA(F21):DA(E5) DG(F23):DC(E4) DG(F24):DC(E3) chainD ( 14) GLN14 0 0 0 0 0 1 2 8 1 0 0 0 0 0 0 0 0 0 0 0 ( 17) TRP17 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG18 0 0 0 0 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mehlyivsydirnQrrWRrlfktmhgfgcwlqlsvfqcrldririikmeaaineivnhaedhvlildlgpaenvkpkvssigktfdpilrq >7mk9_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=COMPLEX STRUCTURE OF TRAILING EC OF EC+EC (TRAILING EC-FOCUSED) organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(O-31):DA(N31) DT(O-30):DA(N30) DG(O-29):DC(N29) DG(O-28):DC(N28) DT(O-27):DA(N27) DT(O-26):DA(N26) DT(O-25):DA(N25) DT(O-24):DA(N24) DT(O-23):DA(N23) DT(O-22):DA(N22) DT(O-21):DA(N21) DG(O-20):DC(N20) DC(O-19):DG(N19) DA(O-18):DT(N18) DC(O-17):DG(N17) DT(O-16):DA(N16) DA(O-15):DT(N15) DT(O-14):DA(N14) DA(O-13):DT(N13) DT(O-12):DT(N12) DT(O-11):DT(N11) DT(O-10):DA(N10) DG(O-9):DA(N9) DT(O-8):DA(N8) DG(O-7):DA(N7) DG(O-6):DA(N6) DG(O-5):DA(N5) DG(O-4):DA(N4) DA(O-3):DA(N3) DA(O-2):DT(N2) DG(O-1):DC(N1) DG(O1):DC(N-1) DC(O2):DG(N-2) DA(O3):DT(N-3) DC(O4):DG(N-4) DT(O5):DA(N-5) DA(O6):DT(N-6) DG(O7):DC(N-7) DT(O8):DA(N-8) DG(O9):DC(N-9) chainA (251) PHE252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 0 0 (253) GLU254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (255) GLN256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (447) PRO448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (830) THR831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (831) ALA832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisFnEsQrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkym >7mk9_AB: title=COMPLEX STRUCTURE OF TRAILING EC OF EC+EC (TRAILING EC-FOCUSED) organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(N-9):DG(O9) DA(N-8):DT(O8) DC(N-7):DG(O7) DT(N-6):DA(O6) DA(N-5):DT(O5) DG(N-4):DC(O4) DT(N-3):DA(O3) DG(N-2):DC(O2) DC(N-1):DG(O1) DC(N1):DG(O-1) DT(N2):DA(O-2) DA(N3):DA(O-3) DA(N4):DG(O-4) DA(N5):DG(O-5) DA(N6):DG(O-6) DA(N7):DG(O-7) DA(N8):DT(O-8) DA(N9):DG(O-9) DA(N10):DT(O-10) DT(N11):DT(O-11) DT(N12):DT(O-12) DT(N13):DA(O-13) DA(N14):DT(O-14) DT(N15):DA(O-15) DA(N16):DT(O-16) DG(N17):DC(O-17) DT(N18):DA(O-18) DG(N19):DC(O-19) DC(N20):DG(O-20) DA(N21):DT(O-21) DA(N22):DT(O-22) DA(N23):DT(O-23) DA(N24):DT(O-24) DA(N25):DT(O-25) DA(N26):DT(O-26) DA(N27):DT(O-27) DC(N28):DG(O-28) DC(N29):DG(O-29) DA(N30):DT(O-30) DA(N31):DT(O-31) chainA (251) PHE252 0 0 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) GLU254 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) GLN256 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) PRO448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (830) THR831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (831) ALA832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (443) SER474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisFnEsQrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqPslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavkTAetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkym/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhttesdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvktyeaidvpgrelkyedsesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygrssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveeahdfnmklainaktitsglkyalatgnwgeqkkamSsragvsqvlnrytysstlshlrrtntpigrdgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaakrirattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpispdeeelgqrtayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamniprlytdrsrd >7mkd_IJLR:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI RNA POLYMERASE BOUND TO LAMBDA PR PROMOTER DNA (CLASS 1) organism=ESCHERICHIA COLI DNA sequence DG(Q8):DC(P83) DA(Q9):DT(P82) DC(Q10):DG(P81) DA(Q11):DT(P80) DT(Q12):DA(P79) DA(Q13):DT(P78) DC(Q14):DG(P77) DA(Q15):DT(P76) DA(Q16):DT(P75) DC(Q17):DG(P74) DC(Q18):DG(P73) DT(Q19):DA(P72) DC(Q20):DG(P71) DC(Q21):DG(P70) DT(Q22):DA(P69) DT(Q23):DA(P68) DA(Q24):DT(P67) DG(Q25):DC(P66) DT(Q26):DA(P65) DA(Q27):DT(P64) DC(Q28):DG(P63) DA(Q29):DT(P62) DT(Q30):DA(P61) DG(Q31):DC(P60) DC(Q32):DG(P59) DA(Q33):DT(P58) DA(Q34):DT(P57) DC(Q35):DG(P56) DC(Q36):DG(P55) DA(Q37):DT(P54) DT(Q38):DA(P53) DT(Q39):DA(P52) DA(Q40):DT(P51) DT(Q41):DA(P50) DC(Q42):DG(P49) DA(Q43):DT(P48) DC(Q44):DG(P47) DC(Q45):DG(P46) DG(Q46):DC(P45) DC(Q47):DG(P44) DC(Q48):DG(P43) DA(Q49):DT(P42) DG(Q50):DC(P41) DA(Q51):DT(P40) DG(Q52):DC(P39) DG(Q53):DC(P38) DT(Q54):DA(P37) DA(Q55):DT(P36) DA(Q56):DT(P35) DA(Q57):DT(P34) DA(Q58):DT(P33) DT(Q59):DA(P32) DA(Q60):DT(P31) DG(Q61):DC(P30) DT(Q62):DA(P29) DC(Q63):DG(P28) DA(Q64):DT(P27) DA(Q65):DT(P26) DC(Q66):DG(P25) DA(Q67):DT(P24) DC(Q68):DG(P23) DG(Q69):DC(P22) DC(Q70):DG(P21) DA(Q71):DT(P20) DC(Q72):DG(P19) DG(Q73):DC(P18) DG(Q74):DC(P17) DT(Q75):DA(P16) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (496) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (513) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 12) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) SER517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) LEU519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (447) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 19 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 3 0 0 0 0 0 0 0 0 0 0 (449) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 (451) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 chainR ( 16) ARG265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveravkerlslgdldtlmpqdminakPisaavkeffgSsqlsqFmdqnnplseithkrrisalgpggLtrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/ssveseigrttDpVRmyMremgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdppelarekaelraqyvvtrdtiktaqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNrglqfldliqegniglmkavdkFEyrRgYKfSTYaTWwiRQaiTrsiadqartiripvHmiEtiNklNrisrqmlqemgreptpeelaermlmpedkirkvlkiakepIsmetpIgdDedShLgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvTRERiRQieakalrklrhpsrsevlrsfl/dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >7mkd_L:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI RNA POLYMERASE BOUND TO LAMBDA PR PROMOTER DNA (CLASS 1) organism=ESCHERICHIA COLI DNA sequence DG(Q8):DC(P83) DA(Q9):DT(P82) DC(Q10):DG(P81) DA(Q11):DT(P80) DT(Q12):DA(P79) DA(Q13):DT(P78) DC(Q14):DG(P77) DA(Q15):DT(P76) DA(Q16):DT(P75) DC(Q17):DG(P74) DC(Q18):DG(P73) DT(Q19):DA(P72) DC(Q20):DG(P71) DC(Q21):DG(P70) DT(Q22):DA(P69) DT(Q23):DA(P68) DA(Q24):DT(P67) DG(Q25):DC(P66) DT(Q26):DA(P65) DA(Q27):DT(P64) DC(Q28):DG(P63) DA(Q29):DT(P62) DT(Q30):DA(P61) DG(Q31):DC(P60) DC(Q32):DG(P59) DA(Q33):DT(P58) DA(Q34):DT(P57) DC(Q35):DG(P56) DC(Q36):DG(P55) DA(Q37):DT(P54) DT(Q38):DA(P53) DT(Q39):DA(P52) DA(Q40):DT(P51) DT(Q41):DA(P50) DC(Q42):DG(P49) DA(Q43):DT(P48) DC(Q44):DG(P47) DC(Q45):DG(P46) DG(Q46):DC(P45) DC(Q47):DG(P44) DC(Q48):DG(P43) DA(Q49):DT(P42) DG(Q50):DC(P41) DA(Q51):DT(P40) DG(Q52):DC(P39) DG(Q53):DC(P38) DT(Q54):DA(P37) DA(Q55):DT(P36) DA(Q56):DT(P35) DA(Q57):DT(P34) DA(Q58):DT(P33) DT(Q59):DA(P32) DA(Q60):DT(P31) DG(Q61):DC(P30) DT(Q62):DA(P29) DC(Q63):DG(P28) DA(Q64):DT(P27) DA(Q65):DT(P26) DC(Q66):DG(P25) DA(Q67):DT(P24) DC(Q68):DG(P23) DG(Q69):DC(P22) DC(Q70):DG(P21) DA(Q71):DT(P20) DC(Q72):DG(P19) DG(Q73):DC(P18) DG(Q74):DC(P17) DT(Q75):DA(P16) chainL ( 12) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) ASP514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) SER517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) LEU519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (447) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 19 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 3 0 0 0 0 0 0 0 0 0 0 (449) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 (451) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (452) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 prot.sequence ssveseigrttDpVRmyMremgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdppelarekaelraqyvvtrdtiktaqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNrglqfldliqegniglmkavdkFEyrRgYKfSTYaTWwiRQaiTrsiadqartiripvHmiEtiNklNrisrqmlqemgreptpeelaermlmpedkirkvlkiakepIsmetpIgdDedShLgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvTRERiRQieakalrklrhpsrsevlrsfl >7mke_IJL: title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI RNA POLYMERASE BOUND TO LAMBDA PR PROMOTER DNA (CLASS 2) organism=ESCHERICHIA COLI DNA sequence DC(Q18):DC(P66) DT(Q19):DA(P65) DC(Q20):DT(P64) DC(Q21):DG(P63) DT(Q22):DG(P56) DT(Q23):DG(P55) DA(Q24):DT(P54) DG(Q25):DA(P53) DT(Q26):DA(P52) DA(Q27):DT(P51) DC(Q28):DA(P50) DC(Q42):DG(P49) DA(Q43):DT(P48) DC(Q44):DG(P47) DC(Q45):DG(P46) DG(Q46):DC(P45) DC(Q47):DG(P44) DC(Q48):DG(P43) DA(Q49):DT(P42) DG(Q50):DC(P41) DA(Q51):DT(P40) DG(Q52):DC(P39) DG(Q53):DC(P38) DT(Q54):DA(P37) DA(Q55):DT(P36) DA(Q56):DT(P35) DA(Q57):DT(P34) DA(Q58):DT(P33) DT(Q59):DA(P32) DA(Q60):DT(P31) DG(Q61):DC(P30) DT(Q62):DA(P29) DC(Q63):DG(P28) DA(Q64):DT(P27) DA(Q65):DT(P26) DC(Q66):DG(P25) DA(Q67):DT(P24) chainI (370) ARG371 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ chainL ( 6) ASP96 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) VAL98 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG99 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) MET102 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LEU110 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) GLU116 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ASN383 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) ARG385 0 0 0 0 0 16 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) LEU386 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (273) PHE419 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) ARG423 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) TYR425 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) LYS426 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) SER428 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) THR429 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) TYR430 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) THR432 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) TRP433 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) GLN437 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) THR440 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (438) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (439) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 7 0 0 (440) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 3 (442) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 (443) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 (447) LYS593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqevdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklElrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyeKdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/igrttDpVRmyMremgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvelarekfaelraqyvvtrdtitaqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqfldliqegniglmkavdkFeyrRgYKfSTYaTWwirQaiTRsiadqartiripvHmiEtinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvTRERiRQieaKalrklrhpsrsevlrsfl >7mki_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI RNA POLYMERASE BOUND TO LAMBDA PR (-5G TO C) PROMOTER DNA organism=ESCHERICHIA COLI DNA sequence DT(P24):DA(Q67) DG(P25):DC(Q66) DT(P26):DA(Q65) DT(P27):DA(Q64) DG(P28):DC(Q63) DA(P29):DT(Q62) DC(P30):DG(Q61) DT(P31):DA(Q60) DA(P32):DT(Q59) DT(P33):DA(Q58) DT(P34):DA(Q57) DT(P35):DA(Q56) DT(P36):DA(Q55) DA(P37):DT(Q54) DC(P38):DG(Q53) DC(P39):DG(Q52) DT(P40):DA(Q51) DC(P41):DG(Q50) DT(P42):DA(Q49) DG(P43):DC(Q48) DG(P44):DC(Q47) DC(P45):DG(Q46) DG(P46):DC(Q45) DG(P47):DC(Q44) DT(P48):DA(Q43) DG(P49):DC(Q42) DA(P50):DT(Q41) DT(P51):DA(Q40) DA(P52):DT(Q39) DA(P53):DT(Q38) DC(P56):DC(Q32) DT(P57):DG(Q31) DA(P61):DT(Q30) DT(P62):DA(Q29) DG(P63):DC(Q28) DT(P64):DA(Q27) DA(P65):DT(Q26) DC(P66):DG(Q25) DT(P67):DA(Q24) DA(P68):DT(Q23) DA(P69):DT(Q22) DG(P70):DC(Q21) DG(P71):DC(Q20) DA(P72):DT(Q19) DG(P73):DC(Q18) DG(P74):DC(Q17) DT(P75):DA(Q16) chainI (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (496) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) LYS503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveravkerlslgdldtlmpqdminakPisaavKEffgSsqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >7mki_IJL: title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI RNA POLYMERASE BOUND TO LAMBDA PR (-5G TO C) PROMOTER DNA organism=ESCHERICHIA COLI DNA sequence DT(P24):DA(Q67) DG(P25):DC(Q66) DT(P26):DA(Q65) DT(P27):DA(Q64) DG(P28):DC(Q63) DA(P29):DT(Q62) DC(P30):DG(Q61) DT(P31):DA(Q60) DA(P32):DT(Q59) DT(P33):DA(Q58) DT(P34):DA(Q57) DT(P35):DA(Q56) DT(P36):DA(Q55) DA(P37):DT(Q54) DC(P38):DG(Q53) DC(P39):DG(Q52) DT(P40):DA(Q51) DC(P41):DG(Q50) DT(P42):DA(Q49) DG(P43):DC(Q48) DG(P44):DC(Q47) DC(P45):DG(Q46) DG(P46):DC(Q45) DG(P47):DC(Q44) DT(P48):DA(Q43) DG(P49):DC(Q42) DA(P50):DT(Q41) DT(P51):DA(Q40) DA(P52):DT(Q39) DA(P53):DT(Q38) DC(P56):DC(Q32) DT(P57):DG(Q31) DA(P61):DT(Q30) DT(P62):DA(Q29) DG(P63):DC(Q28) DT(P64):DA(Q27) DA(P65):DT(Q26) DC(P66):DG(Q25) DT(P67):DA(Q24) DA(P68):DT(Q23) DA(P69):DT(Q22) DG(P70):DC(Q21) DG(P71):DC(Q20) DA(P72):DT(Q19) DG(P73):DC(Q18) DG(P74):DC(Q17) DT(P75):DA(Q16) chainI (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (496) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) LYS503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (411) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (774) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (274) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) ILE460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) GLU574 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) THR583 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) ARG584 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) GLU585 0 0 4 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) ARG586 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ARG588 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) GLN589 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveravkerlslgdldtlmpqdminakPisaavKEffgSsqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqevdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/eigrttdpVRmyMremgtvelltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvpelarekfaelraqyvvtrdtiaqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlrlvisiakkytNrglqfldliqegniglmkavdkFEyrRgYkfSTYaTWwiRQaiTRsiadqartiripvHmietINklNrisRqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytlEevgkqfdvTRERiRQieakalrklrhpsrsevlrsfl >7mkj_IJLR:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI RNA POLYMERASE BOUND TO T7A1 PROMOTER DNA organism=ESCHERICHIA COLI DNA sequence DC(P20):DG(Q72) DA(P21):DT(Q71) DA(P22):DT(Q70) DA(P23):DT(Q69) DA(P24):DT(Q68) DA(P25):DT(Q67) DG(P26):DC(Q66) DA(P27):DT(Q65) DG(P28):DC(Q64) DT(P29):DA(Q63) DA(P30):DT(Q62) DT(P31):DA(Q61) DT(P32):DA(Q60) DG(P33):DC(Q59) DA(P34):DT(Q58) DC(P35):DG(Q57) DT(P36):DA(Q56) DT(P37):DA(Q55) DA(P38):DT(Q54) DA(P39):DT(Q53) DA(P40):DT(Q52) DG(P41):DC(Q51) DT(P42):DA(Q50) DC(P43):DG(Q49) DT(P44):DA(Q48) DA(P45):DT(Q47) DA(P46):DT(Q46) DC(P47):DG(Q45) DC(P48):DG(Q44) DT(P49):DA(Q43) DA(P50):DT(Q42) DT(P51):DA(Q41) DA(P52):DT(Q40) DG(P53):DC(Q39) DG(P54):DC(Q38) DA(P55):DT(Q37) DT(P56):DA(Q36) DA(P57):DT(Q35) DC(P58):DG(Q34) DT(P59):DA(Q33) DT(P60):DA(Q32) DA(P61):DT(Q31) DC(P62):DG(Q30) DA(P63):DG(Q23) DG(P64):DC(Q22) DC(P65):DT(Q21) DC(P66):DC(Q20) DA(P67):DT(Q19) DT(P68):DC(Q18) DC(P69):DC(Q17) DG(P70):DC(Q16) DA(P71):DT(Q15) DG(P72):DG(Q14) DA(P73):DT(Q13) DG(P74):DG(Q12) DG(P75):DC(Q11) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 8 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 (366) TYR367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (469) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (477) ARG478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (496) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) LYS503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 chainJ (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (328) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) GLU585 0 0 0 0 0 0 0 0 0 0 0 2 5 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG586 0 0 0 0 0 0 0 0 0 5 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiYrmmRpgEpptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveRavkeRlslgdldtlmpqdminakPisaavKEffgSsqlsqfmdqnnplseithkrrisalgpggLtreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/eigrttdpVRmyMreMgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpelarekfaelraqyvvtrdtikhataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakKYtNRglqFldliqegniglmkavdkFEyrRgYkfSTYaTWwiRQaiTrsiadqartiripvHmiEtinklnRisRqmlqemgreptpeelaermlmpedkirkvlkiakepIsmetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtRERirqieakalrklrhpsrsevlrsfl/dpillrpvDDleLtvRsancLkaeaiHyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenwp >7mkj_L:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI RNA POLYMERASE BOUND TO T7A1 PROMOTER DNA organism=? DNA sequence DC(P20):DG(Q72) DA(P21):DT(Q71) DA(P22):DT(Q70) DA(P23):DT(Q69) DA(P24):DT(Q68) DA(P25):DT(Q67) DG(P26):DC(Q66) DA(P27):DT(Q65) DG(P28):DC(Q64) DT(P29):DA(Q63) DA(P30):DT(Q62) DT(P31):DA(Q61) DT(P32):DA(Q60) DG(P33):DC(Q59) DA(P34):DT(Q58) DC(P35):DG(Q57) DT(P36):DA(Q56) DT(P37):DA(Q55) DA(P38):DT(Q54) DA(P39):DT(Q53) DA(P40):DT(Q52) DG(P41):DC(Q51) DT(P42):DA(Q50) DC(P43):DG(Q49) DT(P44):DA(Q48) DA(P45):DT(Q47) DA(P46):DT(Q46) DC(P47):DG(Q45) DC(P48):DG(Q44) DT(P49):DA(Q43) DA(P50):DT(Q42) DT(P51):DA(Q41) DA(P52):DT(Q40) DG(P53):DC(Q39) DG(P54):DC(Q38) DA(P55):DT(Q37) DT(P56):DA(Q36) DA(P57):DT(Q35) DC(P58):DG(Q34) DT(P59):DA(Q33) DT(P60):DA(Q32) DA(P61):DT(Q31) DC(P62):DG(Q30) DA(P63):DG(Q23) DG(P64):DC(Q22) DC(P65):DT(Q21) DC(P66):DC(Q20) DA(P67):DT(Q19) DT(P68):DC(Q18) DC(P69):DC(Q17) DG(P70):DC(Q16) DA(P71):DT(Q15) DG(P72):DG(Q14) DA(P73):DT(Q13) DG(P74):DG(Q12) DG(P75):DC(Q11) chainL ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (328) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) GLU585 0 0 0 0 0 0 0 0 0 0 0 2 5 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG586 0 0 0 0 0 0 0 0 0 5 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eigrttdpVRmyMreMgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpelarekfaelraqyvvtrdtikhataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakKYtNRglqFldliqegniglmkavdkFEyrRgYkfSTYaTWwiRQaiTrsiadqartiripvHmiEtinklnRisRqmlqemgreptpeelaermlmpedkirkvlkiakepIsmetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtRERirqieakalrklrhpsrsevlrsfl >7mkn_CD: title=ESCHERICHIA COLI RNA POLYMERASE AND RAPA ELONGATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(N1):DC(T22) DG(N2):DT(T21) DG(N3):DC(T20) DC(N4):DT(T19) DT(N5):DC(T18) DA(N6):DC(T17) DA(N14):DA(T16) DT(N15):DT(T15) DG(N16):DG(T14) DA(N17):DT(T13) DC(N18):DG(T12) DG(N19):DC(T11) DG(N20):DC(T10) DC(N21):DG(T9) DG(N22):DC(T8) DA(N23):DT(T7) DA(N24):DT(T6) DT(N25):DA(T5) DA(N26):DT(T4) DC(N27):DG(T3) DC(N28):DG(T2) DC(N29):DG(T1) chainC (149) ARG151 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG201 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) MET370 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ILE445 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ASP446 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) ARG451 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (512) PHE514 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (536) LEU538 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 53 0 0 0 0 0 0 0 0 0 0 0 0 (545) VAL547 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 29) GLU42 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) TYR46 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) ARG352 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) ALA426 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) PRO427 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) THR790 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (778) ALA791 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmMrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqFmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/teefdaikialaspdmirswsfgevkkpEtinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlariptgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >7mkn_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI RNA POLYMERASE AND RAPA ELONGATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(T1):DC(N29) DG(T2):DC(N28) DG(T3):DC(N27) DT(T4):DA(N26) DA(T5):DT(N25) DT(T6):DA(N24) DT(T7):DA(N23) DC(T8):DG(N22) DG(T9):DC(N21) DC(T10):DG(N20) DC(T11):DG(N19) DG(T12):DC(N18) DT(T13):DA(N17) DG(T14):DG(N16) DT(T15):DT(N15) DA(T16):DA(N14) DC(T17):DA(N6) DC(T18):DT(N5) DT(T19):DC(N4) DC(T20):DG(N3) DT(T21):DG(N2) DC(T22):DG(N1) chainD ( 29) GLU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 33) TYR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 (339) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (413) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 (414) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 (777) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 (778) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence teefdaikialaspdmirswsfgevkkpEtinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlariptgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >7mko_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI RNA POLYMERASE ELONGATION COMPLEX organism=? DNA sequence DG(T1):DC(N29) DG(T2):DC(N28) DG(T3):DC(N27) DT(T4):DA(N26) DA(T5):DT(N25) DT(T6):DA(N24) DT(T7):DA(N23) DC(T8):DG(N22) DG(T9):DC(N21) DC(T10):DG(N20) DC(T11):DG(N19) DG(T12):DC(N18) DT(T13):DA(N17) DG(T14):DG(N16) DT(T15):DT(N15) DA(T16):DA(N14) DC(T17):DA(N6) DC(T18):DT(N5) DT(T19):DC(N4) DC(T20):DG(N3) DT(T21):DG(N2) DC(T22):DG(N1) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (199) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (443) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (444) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (449) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (536) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 (545) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpksdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >7mko_CD: title=ESCHERICHIA COLI RNA POLYMERASE ELONGATION COMPLEX organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(N1):DC(T22) DG(N2):DT(T21) DG(N3):DC(T20) DC(N4):DT(T19) DT(N5):DC(T18) DA(N6):DC(T17) DA(N14):DA(T16) DT(N15):DT(T15) DG(N16):DG(T14) DA(N17):DT(T13) DC(N18):DG(T12) DG(N19):DC(T11) DG(N20):DC(T10) DC(N21):DG(T9) DG(N22):DC(T8) DA(N23):DT(T7) DA(N24):DT(T6) DT(N25):DA(T5) DA(N26):DT(T4) DC(N27):DG(T3) DC(N28):DG(T2) DC(N29):DG(T1) chainC (149) ARG151 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG201 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ILE445 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ASP446 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) ARG451 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (536) LEU538 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 (545) VAL547 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 33) TYR46 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) THR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (339) ARG352 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) ALA426 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (414) PRO427 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) THR790 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (778) ALA791 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpksdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/teefdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlariptgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >7ml0_7AMOQRWX:Cyclin-like;Zinc_beta-ribbon;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases; title=RNA POLYMERASE II PRE-INITIATION COMPLEX (PIC1) organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T99):DT(N67) DT(T100):DA(N66) DG(T101):DC(N65) DT(T102):DA(N64) DA(T103):DT(N63) DC(T104):DG(N62) DA(T105):DT(N61) DA(T106):DT(N60) DA(T107):DT(N59) DC(T108):DG(N58) DA(T109):DT(N57) DC(T110):DG(N56) DA(T111):DT(N55) DC(T112):DG(N54) DA(T113):DT(N53) DT(T114):DA(N52) DC(T115):DG(N51) DA(T116):DT(N50) DA(T117):DT(N49) DA(T118):DT(N48) DG(T119):DC(N47) DG(T120):DC(N46) DT(T121):DA(N45) DT(T122):DA(N44) DT(T123):DA(N43) DA(T124):DT(N42) DT(T125):DA(N41) DA(T126):DT(N40) DG(T127):DC(N39) DA(T128):DT(N38) DT(T129):DA(N37) DA(T130):DT(N36) DC(T131):DG(N35) DA(T132):DT(N34) DT(T133):DA(N33) DT(T134):DA(N32) DG(T135):DC(N31) DA(T136):DT(N30) DA(T137):DT(N29) DA(T138):DT(N28) DC(T139):DG(N27) DT(T140):DA(N26) DT(T141):DA(N25) DT(T142):DA(N24) DT(T143):DA(N23) DA(T144):DT(N22) DT(T145):DA(N21) DA(T146):DT(N20) DT(T147):DA(N19) DC(T149):DG(N17) DG(T150):DC(N16) DC(T151):DG(N15) DG(T152):DC(N14) DC(T153):DG(N13) DC(T154):DG(N12) DT(T155):DA(N11) DT(T156):DA(N10) DT(T157):DA(N9) DT(T158):DA(N8) DT(T159):DA(N7) DT(T160):DA(N6) DT(T161):DA(N5) DT(T162):DA(N4) DT(T163):DA(N3) DT(T164):DA(N2) chainA chainM chainQ chainR chainW chainX chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain7 (334) ARG466 0 0 0 0 0 0 0 0 0 17 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ARG575 0 5 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) GLN633 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence padfvpdsvsgmfrshdfsylrlrpdhasrplwispsdgriilesfsplaeqaqdflvtiaepisrpshiheykitayslyaavsvgletddiisvldrlskvpvaesiinfikgatisygkvklvikhnryfvettqadilqmllndsvigplridsdhqvqppedvlereeedddidavhsfeianesvevvkkrcqeidypvleeydfrndhrnpdldidlkpstqirpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflqwctlqpencavftsdnkemfqtesglvvstysmvantrnRshdsqkvmdfltgrewgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeanwmelsqkghianvqcaevwcpmtaefyqeylretaRkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpQqermnilqnfqyndqintiflskvgdtsidlpeatcliqisshygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmenipnlayasprerrellqevllkneea/gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpsrggcgntqptirkdglklvgswkkpelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartviSgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvIpystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcMgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfsqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvk/pnlnivltcpeckvyppkiverfsegdvvcalcglvlsdklvdtrsewrtfnplldgnnlstrigkgettdmrftkelnkaqgknvmdkkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktkefgktlnimknilrgksqnltyiprfcshlglpmqvttsaeytakkckeikeiagkspitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdp/sgivptlqNivatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvtgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFpgliyrmvkpkivlLiFvsgkivlTgakqreeiyqafeaiypvlsefrkm/fikrdrmrRnflrmreynefplraipkedlenmrthllKfqskkkinpvtdfhLpVrlhrkRktrqlkvldenakklrfeefypwvmedfyntwvgsyEaGnsdsyvllsveddgsftmipadkvykftArnkyatltideaekRmDk/dldlersnRqvwlvrlpmflaekwrlgkirinkskitlLlnepheydleltkkVvEneyvfTeqtipkktaivgtvchecqvmpyhkiveqrrnivklNnKerittldetvgvtmshtgmsmrsdnsnfLkvmpkkeildylfkLfDeydywslKglkertrqpeahlkecldkvatlvkkgpyafkytl/piddivknLlkfvvrgfyggsfvlvldailfhsvlaedDlkqllsinktelgpLiArlrsdRlisihkqreyppnsksvervyyyvkyphaidaikwkVhQvvqrlkddldknsepngymcpicltkytQleavqllnfdrtefLcSlcdeplvEddsgkknkekqdklnrlmdqiqpiidslkkiddsri/hdsskllwAteyiqkkgkpvlvnelldylsmkkddkviEllkkldriefdpkkGtFkylhsPsellkllrsqvtfkgisckdlkdgwpqcdetinqleEdSkilvlrtkkdktpryvwynsggnlkcidEefvkmwenvqlpqfAeLprklqdlGl >7ml1_7:P-loop_containing_nucleoside_triphosphate_hydrolases; title=RNA POLYMERASE II PRE-INITIATION COMPLEX (PIC2) organism=? DNA sequence DA(N2):DT(T164) DA(N3):DT(T163) DA(N4):DT(T162) DA(N5):DT(T161) DA(N6):DT(T160) DA(N7):DT(T159) DA(N8):DT(T158) DA(N9):DT(T157) DA(N10):DT(T156) DA(N11):DT(T155) DG(N12):DC(T154) DG(N13):DC(T153) DC(N14):DG(T152) DG(N15):DC(T151) DC(N16):DG(T150) DG(N17):DC(T149) DT(N18):DA(T148) DA(N19):DT(T147) DT(N20):DA(T146) DA(N21):DT(T145) DT(N22):DA(T144) DA(N23):DT(T143) DA(N24):DT(T142) DA(N25):DT(T141) DA(N26):DT(T140) DG(N27):DC(T139) DT(N28):DA(T138) DT(N29):DA(T137) DT(N30):DA(T136) DC(N31):DG(T135) DA(N32):DT(T134) DA(N33):DT(T133) DT(N34):DA(T132) DG(N35):DC(T131) DT(N36):DA(T130) DC(N37):DG(T129) DG(N38):DC(T128) DC(N39):DG(T127) DG(N40):DC(T126) DA(N41):DT(T125) DA(N42):DT(T124) DT(N43):DA(T123) DT(N44):DA(T122) DC(N45):DG(T121) DG(N46):DC(T120) DG(N47):DC(T119) DT(N48):DA(T118) DT(N49):DA(T117) DG(N50):DC(T116) DT(N51):DA(T115) DA(N52):DT(T114) DC(N53):DG(T113) DA(N54):DT(T112) DT(N55):DA(T111) DA(N56):DT(T110) DC(N57):DG(T109) DA(N58):DT(T108) chain7 (309) ASP441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 (332) ARG464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 14 0 0 0 0 0 (334) ARG466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 prot.sequence padfvpdsvsgmfrshdfsylrlrpdhasrplwispsdgriilesfsplaeqaqdflvtiaepisrpshiheykitayslyaavsvgletddiisvldrlskvpvaesiinfikgatisygkvklvikhnryfvettqadilqmllndsvigplridsdhqvqppedvlereeedddidavhsfeianesvevvkkrcqeidypvleeydfrndhrnpdldidlkpstqirpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflqwctlqpencavftsDnkemfqtesglvvstysmvantRnRshdsqkvmdfltgrewgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeanwmelsqkghianvqcaevwcpmtaefyqeylretarkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpqqermnilqnfqyndqintiflskvgdtsidlpeatcliqisshygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmenipnlayasprerrellqevllk >7ml1_7MORUWX:Cyclin-like;Zinc_beta-ribbon;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain; title=RNA POLYMERASE II PRE-INITIATION COMPLEX (PIC2) organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N2):DT(T164) DA(N3):DT(T163) DA(N4):DT(T162) DA(N5):DT(T161) DA(N6):DT(T160) DA(N7):DT(T159) DA(N8):DT(T158) DA(N9):DT(T157) DA(N10):DT(T156) DA(N11):DT(T155) DG(N12):DC(T154) DG(N13):DC(T153) DC(N14):DG(T152) DG(N15):DC(T151) DC(N16):DG(T150) DG(N17):DC(T149) DT(N18):DA(T148) DA(N19):DT(T147) DT(N20):DA(T146) DA(N21):DT(T145) DT(N22):DA(T144) DA(N23):DT(T143) DA(N24):DT(T142) DA(N25):DT(T141) DA(N26):DT(T140) DG(N27):DC(T139) DT(N28):DA(T138) DT(N29):DA(T137) DT(N30):DA(T136) DC(N31):DG(T135) DA(N32):DT(T134) DA(N33):DT(T133) DT(N34):DA(T132) DG(N35):DC(T131) DT(N36):DA(T130) DC(N37):DG(T129) DG(N38):DC(T128) DC(N39):DG(T127) DG(N40):DC(T126) DA(N41):DT(T125) DA(N42):DT(T124) DT(N43):DA(T123) DT(N44):DA(T122) DC(N45):DG(T121) DG(N46):DC(T120) DG(N47):DC(T119) DT(N48):DA(T118) DT(N49):DA(T117) DG(N50):DC(T116) DT(N51):DA(T115) DA(N52):DT(T114) DC(N53):DG(T113) DA(N54):DT(T112) DT(N55):DA(T111) DA(N56):DT(T110) DC(N57):DG(T109) DA(N58):DT(T108) chain7 (309) ASP441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 (332) ARG464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 14 0 0 0 0 0 (334) ARG466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM (225) LYS272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) SER273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR chainU chainW chainX prot.sequence padfvpdsvsgmfrshdfsylrlrpdhasrplwispsdgriilesfsplaeqaqdflvtiaepisrpshiheykitayslyaavsvgletddiisvldrlskvpvaesiinfikgatisygkvklvikhnryfvettqadilqmllndsvigplridsdhqvqppedvlereeedddidavhsfeianesvevvkkrcqeidypvleeydfrndhrnpdldidlkpstqirpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflqwctlqpencavftsDnkemfqtesglvvstysmvantRnRshdsqkvmdfltgrewgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeanwmelsqkghianvqcaevwcpmtaefyqeylretarkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpqqermnilqnfqyndqintiflskvgdtsidlpeatcliqisshygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmenipnlayasprerrellqevllk/pnlnivltcpeckvyppkiverfsegdvvcalcglvlsdklvdtrsewrtfnplldgnnlstrigkgettdmrftkelnkaqgknvmdkkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktkefgktlnimknilrgksqnltyiprfcshlglpmqvttsaeytakkckeikeiagKSpitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdp/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLifasgkmvvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFpgliyrmvkpkivlLifvsgkiVlTgakqreeiyqafeaiypvlsefrkm/dldlersnRqVwlvrlpmflaekwrlgkirinkskitlLlnepheydleltkkVveneyvfteQtipkktaivgtvchecqvmpyhkiveqrrnivklNnKerittldetvgvtmshtgmsmrsdnsnfLkvmpkkeildylfkLfdeydywSlKglkertrqpeahlkecldkvatlvkkgpyafkytl/lmlclydkVtRtkarwkcslkdgvvtinrndytfqkaqVeaewv/piddivknLlKfvvrgfyggsfvlvldailfhsvlaedDlkqllsinktelgpLiarlrsdrlIsihkqreyppnsksvervyyyvkyphaidaikwkVhQvvqrlkddldknsepngymcpicltkytQleavqllnfdrtefLcslcdepLvEddsgkknkekqdklnrlmdqiqpiidslkkiddsri/hdsskllwAtEyiqkkgkpvlvnelldylsmkkddkviEllkkldriefdpkkGtfkylhspsEllkllrsqvtfkgisckdlkdgwpqcdetinqleEdSkilvlrtkkdktpryvwynsggnlkcidEefvkmwenvqlpqfAelprklqDlGl >7ml2_7MORU:Cyclin-like;Zinc_beta-ribbon;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;P-loop_containing_nucleoside_triphosphate_hydrolases; title=RNA POLYMERASE II PRE-INITIATION COMPLEX (PIC3) organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(N2):DT(T164) DA(N3):DT(T163) DA(N4):DT(T162) DA(N5):DT(T161) DA(N6):DT(T160) DA(N7):DT(T159) DA(N8):DT(T158) DA(N9):DT(T157) DA(N10):DT(T156) DA(N11):DT(T155) DG(N12):DC(T154) DG(N13):DC(T153) DC(N14):DG(T152) DG(N15):DC(T151) DG(N17):DG(T150) DT(N18):DA(T148) DA(N19):DT(T147) DT(N20):DA(T146) DA(N21):DT(T145) DT(N22):DA(T144) DA(N23):DT(T143) DA(N24):DT(T142) DA(N25):DT(T141) DA(N26):DT(T140) DT(N27):DA(T139) DT(N28):DA(T138) DT(N29):DA(T137) DC(N30):DG(T136) DA(N31):DT(T135) DA(N32):DT(T134) DT(N33):DA(T133) DG(N34):DC(T132) DT(N35):DA(T131) DC(N36):DG(T130) DG(N37):DC(T129) DC(N38):DG(T128) DG(N39):DC(T127) DA(N40):DT(T126) DA(N41):DT(T125) DT(N42):DA(T124) DT(N43):DA(T123) DC(N44):DG(T122) DG(N45):DC(T121) DG(N46):DC(T120) DT(N47):DA(T119) DT(N48):DA(T118) DG(N49):DC(T117) DT(N50):DA(T116) DA(N51):DT(T115) DC(N52):DG(T114) DA(N53):DT(T113) DT(N54):DA(T112) DA(N55):DT(T111) DC(N56):DG(T110) DA(N57):DT(T109) chainM (169) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR chainU chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain7 (309) ASP441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 1 0 0 0 0 0 0 (332) ARG464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 12 0 0 0 0 (334) ARG466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 prot.sequence padfvpdsvsgmfrshdfsylrlrpdhasrplwispsdgriilesfsplaeqaqdflvtiaepisrpshiheykitayslyaavsvgletddiisvldrlskvpvaesiinfikgatisygkvklvikhnryfvettqadilqmllndsvigplridsdhqvqppedvlereeedddidavhsfeianesvevvkkrcqeidypvleeydfrndhrnpdldidlkpstqirpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflqwctlqpencavftsDnkemfqtesglvvstysmvantRnRshdsqkvmdfltgrewgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeanwmelsqkghianvqcaevwcpmtaefyqeylretarkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpqqermnilqnfqyndqintiflskvgdtsidlpeatcliqisshygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmenipnlayasprerrellqevllk/pnlnivltcpeckvyppkiverfsegdvvcalcglvlsdklvdtrsewrtfnplldgnnlstrigkgettdmrftkelnkaqgknvmdkkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktKefgktlnimknilrgksqnltyiprfcshlglpmqvttsaeytakkckeikeiagkspitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdp/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLifasgkmvvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFpgliyrmvkpkivlLifvsgkiVlTgakqreeiyqafeaiypvlsefrkm/dldlersnRqVwlvrlpmflaekwrlgkirinkskitlLlnepheydleltkkVveneyvfteQtipkktaivgtvchecqvmpyhkiveqrrnivklNnKerittldetvgvtmshtgmsmrsdnsnfLkvmpkkeildylfkLfdeydywSlKglkertrqpeahlkecldkvatlvkkgpyafkytl/enlmlclyDkVtrtkarwkcslkdgvvtinrndytfqkAqveaewv >7ml3_7:P-loop_containing_nucleoside_triphosphate_hydrolases; title=GENERAL TRANSCRIPTION FACTOR TFIIH (WEAK BINDING) organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(N51):DG(T115) DA(N52):DT(T114) DT(N53):DA(T113) DT(N54):DA(T112) DG(N55):DC(T111) DA(N56):DT(T110) DT(N57):DA(T109) DG(N58):DC(T108) DA(N59):DT(T107) DT(N60):DA(T106) DG(N61):DC(T105) DT(N62):DA(T104) DG(N63):DC(T103) DA(N64):DT(T102) DC(N65):DG(T101) DA(N66):DT(T100) DT(N67):DA(T99) DT(N68):DA(T98) DG(N69):DC(T97) DA(N70):DT(T96) DT(N71):DA(T95) DG(N72):DC(T94) DA(N73):DT(T93) DT(N74):DA(T92) DG(N75):DC(T91) DT(N76):DA(T90) DG(N77):DC(T89) DA(N78):DT(T88) DT(N79):DA(T87) DG(N80):DC(T86) chain7 (246) ARG464 0 0 0 0 0 0 0 0 0 0 13 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG466 0 0 0 0 0 0 0 0 3 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence padfvpdsvsgmfrshdfsylrlrpdhasrplwispsdgriilesfsplaeqaqdflvtiaepisrpshiheykitayslyaavsvgletddiisvldrlskvpvaesiinfikgatisleeydfrndhrnpdldidlkpstqirpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflqwctlqpencavftsdnkemfqtesglvvstysmvantRnRshdsqkvmdfltgrewgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeanwmelsqkghianvqcaevwcpmtaefyqeylretarkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpqqermnilqnfqyndqintiflskvgdtsidlpeatcliqisshygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmenipnlayasprerrellqevllk >7ml4_ABRW:TATA-box_binding_protein-like;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;"Winged_helix"_DNA-binding_domain;Zinc_beta-ribbon; title=RNA POLYMERASE II INITIALLY TRANSCRIBING COMPLEX (ITC) organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(T17) DA(T18) DT(T19) DC(T20) DC(T21) DT(T22) DC(T23) DT(T24) DC(T25) DG(T26) DA(T127) DA(T128) DC(T129) DG(T130) DT(T131) DT(T132) DC(T133) DC(T134) DA(T135) DT(T136) DA(T137) DG(T138) DC(T139) DT(T140) DT(T141) DT(T142) DT(T143) DA(T144) DT(T145) DA(T146) DT(T147) DA(T148) DC(T149) DG(T150) DC(T151) DG(T152) DC(T153) DC(T154) DT(T155) DT(T156) DT(T157) DT(T158) DT(T159) DT(T160) DT(T161) DT(T162) DT(T163) DT(T164) chainR chainA (1082) LYS1102 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainW prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlKeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmi/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlieisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyeaidkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpedlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiYqihipyaakllfqelmamnitprlytdrsrdf/dldlersnrqvwlvrlpmflaekwrdlgkirinkskitlllnepheydleltkkvveneyvfteqtipkktaivgtvchecqvmpyhkiveqrrnimpkkeildylfklfdeydywslkglkertrqpeahlkecldkvatlvkkgpyafkytl/piddivknllkfvvrgfyggsfvlvldailfhsvlaeddlkqllsinktelgpliarlrsdrlisihkqreyppnsksvervyyyvkyphaidaikwkvhqvvqrlkddldknsepngymcpicltkytqleavqllnfdrteflcslcdeplveddsgkknkekqdklnrlmdqiqpiidslkkiddsri >7ml4_MOU:TATA-box_binding_protein-like;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;"Winged_helix"_DNA-binding_domain;Zinc_beta-ribbon; title=RNA POLYMERASE II INITIALLY TRANSCRIBING COMPLEX (ITC) organism=SACCHAROMYCES CEREVISIAE DNA sequence DA(T128):DT(N38) DC(T129):DG(N37) DG(T130):DC(N36) DT(T131):DA(N35) DT(T132):DA(N34) DC(T133):DG(N33) DC(T134):DG(N32) DA(T135):DT(N31) DT(T136):DA(N30) DA(T137):DT(N29) DG(T138):DC(N28) DC(T139):DG(N27) DT(T140):DA(N26) DT(T141):DA(N25) DT(T142):DA(N24) DT(T143):DA(N23) DA(T144):DT(N22) DT(T145):DA(N21) DA(T146):DT(N20) DT(T147):DA(N19) DA(T148):DT(N18) DC(T149):DG(N17) DG(T150):DC(N16) DC(T151):DG(N15) DG(T152):DC(N14) DC(T153):DG(N13) DC(T154):DG(N12) DT(T155):DA(N11) DT(T156):DA(N10) DT(T157):DA(N9) DT(T158):DA(N8) DT(T159):DA(N7) DT(T160):DA(N6) DT(T161):DA(N5) DT(T162):DA(N4) DT(T163):DA(N3) DT(T164):DA(N2) chainM (124) LYS201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU ( 15) LYS255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 9) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ltcpeckvyppkiverfsegdvvcalcglvlsdklvdtrsvmdkkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktKefgktlnimknilrgksqnltyiprfcshlglpmqvttsaeytakkckeikeiagkspitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdp/sgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmvvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm/enlmlclydkvtrtKarwkcslkdgvvtinrndytfqkaqveaewv >7mlb_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX WITH 5NT RNA organism=? DNA sequence DC(G6):DG(H22) DT(G7):DA(H21) DG(G8):DC(H20) DC(G9):DG(H19) DA(G10):DT(H18) DT(G11):DA(H17) DC(G12):DG(H16) DC(G13):DG(H15) chainC (414) GLU421 0 0 0 0 0 0 0 8 chainD (1091) TYR1093 0 0 0 0 0 0 2 0 chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrEragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgYltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >7mlb_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRANSCRIPTION INITIATION COMPLEX WITH 5NT RNA organism=? DNA sequence DC(G6):DG(H22) DT(G7):DA(H21) DG(G8):DC(H20) DC(G9):DG(H19) DA(G10):DT(H18) DT(G11):DA(H17) DC(G12):DG(H16) DC(G13):DG(H15) chainD (1091) TYR1093 0 0 0 0 0 0 2 0 prot.sequence kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgYltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea >7mli_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS REITERATIVE TRANSCRIPTION COMPLEX WITH 5NT OLIGO-C RNA organism=? DNA sequence DC(G6):DG(H23) DA(G7):DT(H22) DT(G8):DA(H21) DC(G9):DG(H20) DC(G10):DG(H19) DG(G11):DC(H18) DT(G12):DA(H17) DA(G13):DT(H16) chainC (414) GLU421 0 0 0 0 0 0 0 5 (415) ARG422 0 0 0 0 0 0 0 1 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrERagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvAPgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >7mlj_CDF: title=CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS REITERATIVE TRANSCRIPTION COMPLEX WITH 4NT OLIGO-G RNA organism=? DNA sequence DC(H16):DG(G13) DA(H17):DT(G12) DC(H18):DG(G11) DG(H19):DC(G10) DG(H20):DC(G9) DA(H21):DT(G8) DT(H22):DA(G7) DG(H23):DC(G6) chainC (414) GLU421 10 0 0 0 0 0 0 0 chainD chainF prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltrEragfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgeilaelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekgqplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvApgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltitqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/sdpvrqylheigqvplltleeevelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieanlrlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqartiripvhmvetinklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpigdekdsfygdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >7mr3_BC:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF RECBCD-DNA COMPLEX WITH DOCKED RECBNUC AND STABILIZED RECD organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DT(A55):DA(X25) DG(A56):DC(X24) DA(A57):DT(X23) DA(A58):DT(X22) DA(A59):DT(X21) DC(A60):DG(X20) DT(A61):DA(X19) DA(A62):DT(X18) DG(A63):DC(X17) DG(A64):DC(X16) DA(A65):DT(X15) DT(A66):DA(X14) DC(A67):DG(X13) chainB chainC (1078) ASN1078 0 0 0 0 0 0 0 0 0 0 0 0 7 (1079) MET1079 0 0 0 0 0 0 0 0 0 0 0 0 6 (1080) MET1080 0 0 0 0 0 0 0 0 0 0 0 0 9 prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgidrrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqtltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryylldyksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag/mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfileglsryqinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegNMMvrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq >7mr3_D:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF RECBCD-DNA COMPLEX WITH DOCKED RECBNUC AND STABILIZED RECD organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(X24) DT(X23) DT(X22) DT(X21) DG(X20) DA(X19) DT(X18) DC(X17) DC(X16) DT(X15) DA(X14) DG(X13) DA(X12) DA(X11) DT(X10) DA(X9) DC(X8) DG(X7) DA(X6) DG(X5) DG(X4) DC(X2) DT(X3):DG(X4) chainD (240) HIS241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (246) GLN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (247) PRO248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 7 0 0 0 0 (274) ASP275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 (303) VAL304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (304) GLU305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 (485) ARG486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 (538) HIS539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 prot.sequence klqkqlleavehkqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlenneashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlHrllgaQPgsqrlrhhagnplhldvlvvdeasmiDlpmmsrlidalpdharviflgdrdqlasVEagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiaRndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvHksqgsefdhaalilpsqrtpvvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss >7mr4_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF RECBCD-DNA COMPLEX WITH UNDOCKED RECBNUC AND FLEXIBLE RECD organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(A56):DC(X24) DG(A57):DC(X23) DA(A58):DT(X22) DT(A59):DA(X21) DC(A60):DG(X20) DT(A61):DA(X19) DT(A62):DA(X18) DA(A63):DT(X17) DT(A64):DA(X16) DG(A65):DC(X15) DC(A66):DG(X14) chainB (248) ILE252 2 2 0 0 0 0 0 0 0 0 0 prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqt >7mr4_BC:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=CRYO-EM STRUCTURE OF RECBCD-DNA COMPLEX WITH UNDOCKED RECBNUC AND FLEXIBLE RECD organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DG(A56):DC(X24) DG(A57):DC(X23) DA(A58):DT(X22) DT(A59):DA(X21) DC(A60):DG(X20) DT(A61):DA(X19) DT(A62):DA(X18) DA(A63):DT(X17) DT(A64):DA(X16) DG(A65):DC(X15) DC(A66):DG(X14) chainB (248) ILE252 2 2 0 0 0 0 0 0 0 0 0 chainC prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqt/mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryyWgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclqplpftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfileglsryqinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegnmmvrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq >7mtl_A:DinB/YfiT-like_putative_metalloenzymes; title=CRYSTAL STRUCTURE OF COLIBACTIN SELF-RESISTANCE PROTEIN CLBS IN COMPLEX WITH A DSDNA organism=Escherichia coli DNA sequence DT(C3):DA(D28) DT(C4):DA(D27) DC(C5):DG(D26) DC(C6):DG(D25) DC(C7):DG(D24) DA(C8):DT(D23) DC(C9):DG(D22) DT(C10):DA(D21) DT(C11):DA(D20) DC(C12):DG(D19) DC(C13):DG(D18) DA(C14):DT(D17) DG(C15):DC(D16) chainA ( 85) ASN86 4 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence avpsskeelikainsnfsllnkklesitpqlafeplleghakgttisvanlvsyligwgelvlhwhdqeakgktiifpeegfkwNelgrlaqkfyrdyediteyevllarlkenkqqlvalierfsndelygkpwynkwtrgrmiqfntaspyknasgrlnklqkcla >7mtl_AB:DinB/YfiT-like_putative_metalloenzymes; title=CRYSTAL STRUCTURE OF COLIBACTIN SELF-RESISTANCE PROTEIN CLBS IN COMPLEX WITH A DSDNA organism=Escherichia coli DNA sequence DT(C3):DA(D28) DT(C4):DA(D27) DC(C5):DG(D26) DC(C6):DG(D25) DC(C7):DG(D24) DA(C8):DT(D23) DC(C9):DG(D22) DT(C10):DA(D21) DT(C11):DA(D20) DC(C12):DG(D19) DC(C13):DG(D18) DA(C14):DT(D17) DG(C15):DC(D16) chainA ( 85) ASN86 4 5 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence avpsskeelikainsnfsllnkklesitpqlafeplleghakgttisvanlvsyligwgelvlhwhdqeakgktiifpeegfkwNelgrlaqkfyrdyediteyevllarlkenkqqlvalierfsndelygkpwynkwtrgrmiqfntaspyknasgrlnklqkcla/avpsskeelikainsnfsllnkklesitpqlafepllttisvanlvsyligwgelvlhwhdqeakgktiifpeegfkwnelgrlAqkfyrdyediteyevllarlkenkqqlvalierfsndelygkpwynkwtrgrmiqfntaspyknasgrlnklqkcla >7mvs_AB:Type_II_DNA_topoisomerase; title=DNA GYRASE COMPLEXED WITH UNCLEAVED DNA AND COMPOUND 7 TO 2.6A RESOLUTION organism=STAPHYLOCOCCUS AUREUS DNA sequence DG(C2):DC(D19) DC(C3):DG(D18) DC(C4):DG(D17) DG(C5):DC(D16) DT(C6):DA(D15) DA(C7):DT(D14) DG(C8):DC(D13) DG(C9):DC(D12) DG(C10):DC(D11) DC(C11):DG(D10) DC(C12):DG(D9) DC(C13):DG(D8) DT(C14):DA(D7) DA(C15):DT(D6) DC(C16):DG(D5) DG(C17):DC(D4) DG(C18):DC(D3) DC(C19):DG(D2) DT(C20):DA(D1) chainA ( 45) LYS53 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 (269) SER286 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) GLU289 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) ILE376 0 0 26 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 44) LYS53 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 (270) SER286 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (273) GLU289 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (277) ARG293 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (360) ILE376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 25 0 0 0 prot.sequence gkladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyarinernitsemresfldyamsvivaRalpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvrmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangaSgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql/kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyansrinernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvRmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >7mvs_B:Type_II_DNA_topoisomerase; title=DNA GYRASE COMPLEXED WITH UNCLEAVED DNA AND COMPOUND 7 TO 2.6A RESOLUTION organism=STAPHYLOCOCCUS AUREUS DNA sequence DA(D1):DT(C20) DG(D2):DC(C19) DC(D3):DG(C18) DC(D4):DG(C17) DG(D5):DC(C16) DT(D6):DA(C15) DA(D7):DT(C14) DG(D8):DC(C13) DG(D9):DC(C12) DG(D10):DC(C11) DC(D11):DG(C10) DC(D12):DG(C9) DC(D13):DG(C8) DT(D14):DA(C7) DA(D15):DT(C6) DC(D16):DG(C5) DG(D17):DC(C4) DG(D18):DC(C3) DC(D19):DG(C2) chainB ( 44) LYS53 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 (270) SER286 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (273) GLU289 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) ARG293 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (360) ILE376 0 0 0 25 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kladcsskspeeceiflvegdsaggstksgrdsrtqailplrgKilnvekarldrilnnneirqmitafgtgiggdfdlakaryhkivimtdadvdgahirtllltffyrfmrplieagyvyiaqpptgykglgemnadqlwettmnpehrallqvkledaieadqtfemlmgdvvenrrqfiednavyansrinernitsemresfldyamsvivaralpdvrdglkpvhrrilyglneqgmtpdksykksarivgdvmgkyhphgdsSiyEamvRmaqdfsyryplvdgqgnfgsmdgdgaaamrftearmtkitlellrdinkdtidfidnydgnerepsvlparfpnllangasgIavgmatnipphnltelingvlslsknpdisiaelmediegpdfptaglilgksgirrayetgrgsiqmrsravieergggrqrivvteipfqvnkarmiekiaelvrdkkidgitdlrdetslrtgvrvvidvrkdanasvilnnlykqtplqtsfgvnmialvngrpklinlkealvhylehqktvvrrrtqynlrkakdrahileglrialdhideiistiresdtdkvameslqqrfklsekqaqaildmrlrrltglerdkieaeynellnyiseletiladeevllqlvrdelteirdrfgddrrteiql >7mwk_B:DNA-binding_domain; title=CRYSTAL STRUCTURE OF MBD2 WITH DNA organism=? DNA sequence DG(F1):DC(E12) DC(F2):DG(E11) DC(F3):DG(E10) DA(F4):DT(E9) DA(F5):DT(E8) 5CM(F6):DG(E7) DG(F7):5CM(E6) DT(F8):DA(E5) DT(F9):DA(E4) DG(F10):DC(E3) DG(F11):DC(E2) DC(F12):DG(E1) chainB ( 19) ARG166 0 0 0 0 0 16 12 0 0 0 0 0 ( 29) ASP176 0 0 0 0 0 3 0 0 0 0 0 0 ( 31) TYR178 0 0 0 0 0 1 0 0 0 0 0 0 ( 41) LYS188 0 0 0 0 1 4 8 0 0 0 0 0 prot.sequence krmdcpalppgwkkeeviRksglsagksdvyyfspsgkkfKskpqlarylgntvdlssfdfrtgkmmp >7mwm_B:DNA-binding_domain; title=CRYSTAL STRUCTURE OF MBD2 WITH DNA organism=? DNA sequence DG(E1):DC(F12) DC(E2):DG(F11) DC(E3):DG(F10) DA(E4):DT(F9) DA(E5):DT(F8) 5CM(E6):DG(F7) DG(E7):5CM(F6) DT(E8):DA(F5) DT(E9):DA(F4) DG(E10):DC(F3) DG(E11):DC(F2) DC(E12):DG(F1) chainB ( 25) LYS166 0 0 0 0 0 2 0 0 0 0 0 0 ( 35) ASP176 0 0 0 0 0 3 0 0 0 0 0 0 ( 37) TYR178 0 0 0 0 2 1 0 0 0 0 0 0 ( 45) LYS186 0 0 0 1 0 0 0 0 0 0 0 0 ( 47) ARG188 0 0 0 0 3 12 18 0 0 0 0 0 prot.sequence gatesgkrmdcpalppgwkkeeviKksglsagksDvYyfspsgkKfRskpqlarylgntvdlssfdfrtgkmmp >7mxq_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' RECESSED-END DNA (R-1) organism=Homo sapiens DNA sequence DT(B1):DA(A10) DC(B2):DG(A9) DG(B3):DC(A8) DA(B4):DT(A7) DC(B5):DG(A6) DT(B6):DA(A5) DA(B7):DT(A4) DG(B8):DC(A3) DC(B9):DG(A2) DG(B10):DC(A1) chainZ ( 35) HIS36 27 0 0 0 0 0 0 0 0 0 ( 39) ILE40 9 0 0 0 0 0 0 0 0 0 (116) GLU117 0 3 0 0 0 0 0 0 0 0 (119) THR120 3 0 0 0 0 0 0 0 0 0 (120) ARG121 4 8 12 0 0 0 0 0 0 0 prot.sequence giqgllqfikeasepihvrkykgqvvavdtycwlHkgaIacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearEcfTRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtal >7mxr_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' RECESSED-END DNA (R-2) organism=Homo sapiens DNA sequence DT(B1):DA(A10) DC(B2):DG(A9) DG(B3):DC(A8) DA(B4):DT(A7) DC(B5):DG(A6) DT(B6):DA(A5) DA(B7):DT(A4) DG(B8):DC(A3) DC(B9):DG(A2) DG(B10):DC(A1) chainZ ( 32) CYS33 2 0 0 0 0 0 0 0 0 0 ( 35) HIS36 42 0 0 0 0 0 0 0 0 0 ( 36) LYS37 3 0 0 0 0 0 0 0 0 0 ( 39) ILE40 7 0 0 0 0 0 0 0 0 0 (120) ARG121 0 7 10 0 0 0 0 0 0 0 prot.sequence giqgllqfikeasepihvrkykgqvvavdtyCwlHKgaIacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearecftRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtaly >7mxs_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' RECESSED-END DNA (CR) organism=Homo sapiens DNA sequence DC(A1):DG(B9) DG(A2):DC(B8) DC(A3):DG(B7) DT(A4):DA(B6) DA(A5):DT(B5) DG(A6):DC(B4) DT(A7):DA(B3) DC(A8):DG(B2) chainZ (120) ARG121 0 0 0 0 0 0 0 8 prot.sequence giqgllqfikeasepihvrkykgqvvavdtycwlhkgaiacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearecftRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtaly >7mxt_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' RECESSED-END DNA (CMR) organism=Homo sapiens DNA sequence DG(B2):DC(A8) DA(B3):DT(A7) DC(B4):DG(A6) DT(B5):DA(A5) DA(B6):DT(A4) DG(B7):DC(A3) DC(B8):DG(A2) DG(B9):DC(A1) chainZ (120) ARG121 14 0 0 0 0 0 0 0 prot.sequence giQgllqfikeasepihvrkykgqvvavdtycwlhkgaiacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearecftRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtaly >7mxu_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' FLAP DNA (CF2) organism=Homo sapiens DNA sequence DC(A1):DG(B9) DG(A2):DC(B8) DC(A3):DG(B7) DT(A4):DA(B6) DA(A5):DT(B5) DG(A6):DC(B4) DT(A7):DA(B3) DC(A8):DG(B2) chainZ (120) ARG121 0 0 0 0 0 0 0 10 prot.sequence giqgllqfikeasepihvrkykgqvvavdtycwlhkgaiacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearecftRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtalyf >7mxv_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' RECESSED-END DNA (UR) organism=Homo sapiens DNA sequence DC(A1):DG(B10) DG(A2):DC(B9) DC(A3):DG(B8) DT(A4):DA(B7) DA(A5):DT(B6) DG(A6):DC(B5) DT(A7):DA(B4) DC(A8):DG(B3) DG(A9):DC(B2) chainZ (116) GLU117 0 0 0 0 0 0 0 0 6 (120) ARG121 0 0 0 0 0 0 0 7 12 prot.sequence giqgllqfikeasepihvrkykgqvvavdtycwlhkgaiacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearEcftRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtalyf >7mxw_Z:PIN_domain-like;5'_to_3'_exonuclease,_C-terminal_subdomain; title=CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (WT) IN COMPLEX WITH 5' FLAP DNA (UF1) organism=Homo sapiens DNA sequence DC(A1):DG(B10) DG(A2):DC(B9) DC(A3):DG(B8) DT(A4):DA(B7) DA(A5):DT(B6) DG(A6):DC(B5) DT(A7):DA(B4) DC(A8):DG(B3) DG(A9):DC(B2) chainZ ( 3) GLN4 0 0 0 0 1 6 1 0 0 (120) ARG121 0 0 0 0 0 0 0 5 11 prot.sequence giQgllqfikeasepihvrkykgqvvavdtycwlhkgaiacaeklakgeptdryvgfcmkfvnmllshgikpilvfdgctlpskkeversrrerrqanllkgkqllregkvsearecftRsinithamahkvikaarsqgvdclvapyeadaqlaylnkagivqaiitedsdllafgckkvilkmdqfgngleidqarlgmcrqlgdvfteekfrymcilsgcdylsslrgiglakackvlrlannpdivkvikkighylkmnitvpedyingfiranntflyqlvfdpikrkliplnayeddvdpetlsyagqyvddsialqialgnkdintfeqiddynpdtaenlyf >7mz0_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH DZA AS THE TEMPLATE BASE IN A 1-NUCLEOTIDE GAPPED DNA organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 36 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 5 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7mz1_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH DZA IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE TTP organism=Homo sapiens DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DA(P10):DT(T7) chainA (225) LYS234 0 0 0 0 0 0 0 6 1 0 (262) TYR271 0 0 0 0 0 0 0 0 0 8 (274) ARG283 0 0 0 0 0 0 0 0 0 3 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7mz2_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH DZA AT N-1 OF THE TEMPLATE BASE PAIRED WITH INCOMING DTTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 37 0 0 0 0 ( 26) LYS35 6 0 0 0 0 ( 29) ALA38 4 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7mz3_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 3-DEAZA-3- METHYLADENINE (3DMEA) AS THE TEMPLATE BASE IN A 1-NUCLEOTIDE GAPPED DNA organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 35 ( 29) LYS35 0 0 0 0 8 ( 32) ALA38 0 0 0 0 4 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7mz4_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 3-DEAZA-3- METHYLADENINE (3DMEA) IN THE TEMPLATE BASE PAIRED WITH INCOMING DTTP organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 39 0 0 0 0 ( 29) LYS35 9 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskdekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7mz8_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 3-DEAZA-3- METHYLADENINE (3DMEA) AT N-1 OF THE TEMPLATE BASE PAIRED WITH INCOMING DTTP organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 38 ( 29) LYS35 0 0 0 0 8 ( 32) ALA38 0 0 0 0 4 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7n2m_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF DNA POLYMERASE ALPHA CATALYTIC CORE IN COMPLEX WITH DCTP AND TEMPLATE/PRIMER HAVING T-C MISMATCH AT THE POST- INSERTION SITE organism=HOMO SAPIENS DNA sequence DA(C109) DG(C110) DT(C111) DC(C112) DG(C113) DC(C114) DT(C115) DC(C116) DC(C117) DA(C118) DG(C119) DG(C120) DC(C121) chainA (443) ARG784 0 3 0 0 0 0 0 0 0 0 0 0 0 (468) ARG834 0 0 0 16 12 1 0 0 0 0 0 0 0 (572) LEU951 0 2 0 0 0 0 0 0 0 0 0 0 0 (575) ASN954 0 2 0 0 0 0 0 0 0 0 0 0 0 (576) SER955 0 10 0 0 0 0 0 0 0 0 0 0 0 (578) TYR957 0 2 4 0 0 0 0 0 0 0 0 0 0 (583) PHE962 3 0 0 0 0 0 0 0 0 0 0 0 0 (585) TYR964 20 0 0 0 0 0 0 0 0 0 0 0 0 (674) LYS1053 0 0 0 0 8 0 0 0 0 0 0 0 0 prot.sequence eqvfhfywldayedqynqpgvvflfgkvwiesaethvsccvmvkniertlyflpremkidlntgketgtpismkdvyeefdekiatkykimkfkskpveknyafeipdvpekseylevkysaempqlpqdlkgetfshvfgtntsslelflmnrkikgpcwlevkspqllnqpvswckaeamalkpdlvnvikdvsppplvvmafsmktmqnaknhqneiiamaalvhhsfaldkaapkppfqshfcvvskpkdcifpyafkeviekknvkvevaatertllgfflakvhkidpdiivghniygfelevllqrinvckaphwskigrlkrsnmpklgfgernatcgrmicdveisakelircksyhlselvqqilktervvipmeniqnmysessqllyllehtwkdakfilqimcelnvlplalqitniagnimsrtlmggRserneflllhafyennyivpdkqiRkkaayagglvldpkvgfydkfillldfnslYpsiiqefnicfttvqrveqipelpdpslemgilpreirklverrkqvkqlmkqqdlnpdlilqydirqkalkLtaNSmYgclgFsYsrfyakplaalvtykgreilmhtkemvqkmnleviygdtdsimintnstnleevfklgnkvksevnklyklleididgvfksllllkkKkyaalvveptsdgnyvtkqelkgldivrrdwcdlakdtgnfvigqilsdqsrdtiveniqkrlieigenvlngsvpvsqfeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtvsyvicqdgsnltasqrayapeqlqkqdnltidtqyylaqqihpvvaricepidgidavliatwlgldpt >7n3p_A: title=CRYO-EM STRUCTURE OF THE CAS12K-SGRNA-DSDNA COMPLEX organism=SCYTONEMA HOFMANNII DNA sequence DG(D5):DC(C56) DT(D6):DA(C55) DA(D7):DT(C54) DG(D8):DC(C53) DG(D9):DC(C52) DA(D10):DT(C51) DG(D11):DC(C50) DG(D12):DC(C49) DT(D13):DA(C48) DT(D14):DA(C47) chainA ( 77) SER77 0 0 0 0 0 0 1 0 0 0 ( 78) ARG78 0 0 0 0 0 0 4 9 4 0 ( 81) MET81 0 0 0 0 0 0 0 0 1 3 ( 85) HIS85 0 0 0 0 0 0 0 0 0 7 (118) GLU286 0 0 0 0 0 0 0 0 0 2 (119) THR287 0 0 0 0 0 0 0 0 8 3 (138) ASN306 0 0 0 0 0 3 2 0 0 0 (245) LEU418 0 0 0 0 0 0 0 0 0 1 (248) ARG421 0 0 0 0 0 0 0 6 8 1 prot.sequence msqitiqarlisfesnrqqlwklmadlntplinellcqlgqhpdfekwqqkgklpstvvsqlcqplktdprfagqpSRlyMsaiHivdyiykswlaiqkrlqilltrssslpfplvfETnedmvwsknqkgrlcvhfNglsdlifevycgnrqlhwfqrfledqqtkrksknqhssglftlrnghlvwlegegkgepwnlhhltlyccvdnrlwteegteivrqekadeitkfitnmksdtqqaLiqRkqstltrinnsferpsqplyqgqshilvgvslglekpatvavvdaiankvlayrsikqllgdnyellnrqrrqqqylsherhkaaselgqhidrllakaivalartykagsivlpklgdmrevvqseiqaiaeqkfpgyiegqqkyakqyrvnvhrwsygrliqsiqskaaqtgivieegkqpirgsphdkakelalsaynlrltr >7n4e_CDF: title=ESCHERICHIA COLI SIGMA 70-DEPENDENT PAUSED TRANSCRIPTION ELONGATION COMPLEX organism=ESCHERICHIA COLI DNA sequence DC(21):DG(161) DT(22):DA(160) DA(23):DT(159) DC(24):DG(158) DC(25):DG(157) DA(26):DT(156) DC(27):DG(155) DA(28):DT(154) DA(29):DT(153) DC(210):DG(152) DG(211):DC(151) DA(212):DT(150) DG(213):DC(149) DC(214):DA(144) DT(215):DA(143) DA(216):DT(142) DC(217):DT(141) DC(218):DG(140) DT(219):DG(139) DC(220):DG(138) DT(221):DT(137) DC(222):DA(136) DC(223):DA(135) DT(228):DT(134) DA(229):DA(133) DA(230):DT(132) DG(231):DC(131) DT(232):DA(130) DG(233):DC(129) DT(234):DA(128) DC(235):DG(127) DA(236):DT(126) DA(237):DT(125) DA(238):DT(124) DT(239):DA(123) DT(240):DA(122) DT(241):DA(121) DA(242):DT(120) chainC (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (245) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 (292) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 (294) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 (295) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 (313) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (316) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (318) ILE460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 (322) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrEragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqlsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/eigrttDpVRmyMreMgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfelarekfaelraqyvvtrdtikahataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveanlRlvisiakkytNRglqFldliqegniglmkavdkFEyrRgYkfSTYaTWWiRQaitrsiadqartiripvHmiEtINklNrisRqmlqemgreptpeelaermlmpedkirkvlkia >7n4e_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI SIGMA 70-DEPENDENT PAUSED TRANSCRIPTION ELONGATION COMPLEX organism=ESCHERICHIA COLI DNA sequence DC(21):DG(161) DT(22):DA(160) DA(23):DT(159) DC(24):DG(158) DC(25):DG(157) DA(26):DT(156) DC(27):DG(155) DA(28):DT(154) DA(29):DT(153) DC(210):DG(152) DG(211):DC(151) DA(212):DT(150) DG(213):DC(149) DC(214):DA(144) DT(215):DA(143) DA(216):DT(142) DC(217):DT(141) DC(218):DG(140) DT(219):DG(139) DC(220):DG(138) DT(221):DT(137) DC(222):DA(136) DC(223):DA(135) DT(228):DT(134) DA(229):DA(133) DA(230):DT(132) DG(231):DC(131) DT(232):DA(130) DG(233):DC(129) DT(234):DA(128) DC(235):DG(127) DA(236):DT(126) DA(237):DT(125) DA(238):DT(124) DT(239):DA(123) DT(240):DA(122) DT(241):DA(121) DA(242):DT(120) chainD (245) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqlsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >7n5s_A:beta-beta-alpha_zinc_fingers; title=ZBTB7A ZINC FINGER DOMAIN BOUND TO -200 SITE OF FETAL GLOBIN PROMOTER (OLIGO 6) organism=Homo sapiens DNA sequence DG(X3):DC(Y13) DG(X4):DC(Y12) DG(X5):DC(Y11) DG(X6):DC(Y10) DA(X7):DT(Y9) DA(X8):DT(Y8) DG(X9):DC(Y7) DG(X10):DC(Y6) DG(X11):DC(Y5) DG(X12):DC(Y4) DC(X13):DG(Y3) DC(X14):DG(Y2) DC(X15):DG(Y1) chainA ( 16) LYS396 0 0 0 0 0 0 0 0 4 8 5 0 0 ( 19) ARG399 0 0 0 0 0 0 0 3 10 1 0 0 0 ( 41) ARG421 0 0 0 0 0 0 5 11 1 0 0 0 0 ( 43) ASP423 0 0 0 0 0 0 0 0 6 3 0 0 0 ( 44) LYS424 0 0 0 0 0 1 6 0 0 0 0 0 0 ( 97) ARG477 0 16 10 2 0 0 0 0 0 0 0 0 0 ( 98) SER478 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 99) ASP479 0 0 0 10 5 0 0 0 0 0 0 0 0 (100) HIS480 5 7 0 0 0 0 0 0 0 0 0 0 0 (103) ARG483 10 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fqkcpicekviqgagKlpRhirthtgekpyecnickvrftRqDKlkvhmrkhtgekpylcqqcgaafahnydlknhmrvhtglrpyqcdsccktfvRSDHlhRhlkkdgcn >7n5t_A:beta-beta-alpha_zinc_fingers; title=ZBTB7A ZINC FINGER DOMAIN BOUND TO -200 SITE OF FETAL GLOBIN PROMOTER (OLIGO 5) organism=Homo sapiens DNA sequence DG(X2):DC(Y15) DT(X3):DA(Y14) DG(X4):DC(Y13) DG(X5):DC(Y12) DG(X6):DC(Y11) DG(X7):DC(Y10) DA(X8):DT(Y9) DA(X9):DT(Y8) DG(X10):DC(Y7) DG(X11):DC(Y6) DG(X12):DC(Y5) DG(X13):DC(Y4) DC(X14):DG(Y3) DC(X15):DG(Y2) chainA ( 16) LYS396 0 0 0 0 0 0 0 0 0 0 1 7 3 2 ( 19) ARG399 0 0 0 0 0 0 0 0 0 5 13 2 0 0 ( 41) ARG421 0 0 0 0 0 0 0 0 7 12 3 0 0 0 ( 43) ASP423 0 0 0 0 0 0 0 0 0 0 6 1 0 0 ( 44) LYS424 0 0 0 0 0 0 0 1 5 0 0 0 0 0 ( 97) ARG477 0 0 0 16 10 2 0 0 0 0 0 0 0 0 ( 98) SER478 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 99) ASP479 0 0 0 0 0 10 0 0 0 0 0 0 0 0 (100) HIS480 0 0 9 11 0 0 0 0 0 0 0 0 0 0 (103) ARG483 0 11 11 5 0 0 0 0 0 0 0 0 0 0 prot.sequence fqkcpicekviqgagKlpRhirthtgekpyecnickvrftRqDKlkvhmrkhtgekpylcqqcgaafahnydlknhmrvhtglrpyqcdsccktfvRSDHlhRhlkkdgcn >7n5u_A:beta-beta-alpha_zinc_fingers; title=ZBTB7A ZINC FINGER DOMAIN BOUND TO DNA DUPLEX CONTAINING GGACCC (OLIGO 21) organism=Homo sapiens DNA sequence DA(X2):DT(Y16) DA(X3):DT(Y15) DA(X4):DT(Y14) DC(X5):DG(Y13) DA(X6):DT(Y12) DT(X7):DA(Y11) DC(X8):DG(Y10) DA(X9):DT(Y9) DA(X10):DT(Y8) DG(X11):DC(Y7) DG(X12):DC(Y6) DG(X13):DC(Y5) DT(X14):DA(Y4) DC(X15):DG(Y3) DC(X16):DG(Y2) chainA ( 18) LYS396 0 0 0 0 0 0 0 0 0 0 0 0 6 6 2 ( 21) ARG399 0 0 0 0 0 0 0 0 0 0 12 13 4 0 0 ( 43) ARG421 0 0 0 0 0 0 0 0 0 5 13 2 0 0 0 ( 45) ASP423 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 ( 46) LYS424 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 ( 73) TYR451 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 prot.sequence kafqkcpicekviqgagKlpRhirthtgekpyecnickvrftRqDKlkvhmrkhtgekpylcqqcgaafahnYdlknhmrvh >7n5v_A:beta-beta-alpha_zinc_fingers; title=ZBTB7A ZINC FINGER DOMAIN BOUND TO DNA DUPLEX CONTAINING GGACCC (OLIGO 20) organism=Homo sapiens DNA sequence DG(E1):DC(D16) DG(E2):DC(D15) DG(E3):DC(D14) DA(E4):DT(D13) DC(E5):DG(D12) DC(E6):DG(D11) DC(E7):DG(D10) DT(E8):DA(D9) DT(E9):DA(D8) DG(E10):DC(D7) DA(E11):DT(D6) DT(E12):DA(D5) DG(E13):DC(D4) DT(E14):DA(D3) DT(E15):DA(D2) DT(E16):DA(D1) DG(Y1):DC(X16) DG(Y2):DC(X15) DG(Y3):DC(X14) DA(Y4):DT(X13) DC(Y5):DG(X12) DC(Y6):DG(X11) DC(Y7):DG(X10) DT(Y8):DA(X9) DT(Y9):DA(X8) DG(Y10):DC(X7) DA(Y11):DT(X6) DT(Y12):DA(X5) DG(Y13):DC(X4) DT(Y14):DA(X3) DT(Y15):DA(X2) DT(Y16):DA(X1) chainA ( 16) ALA394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LYS396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 5 0 0 0 0 0 0 0 0 0 0 ( 43) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 3 0 0 0 0 0 0 0 0 0 ( 45) ASP423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 ( 46) LYS424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 prot.sequence kafqkcpicekviqgAgKlpRhirthtgekpyecnickvrftRqDKlkvhmrkhtg >7n5v_AB:beta-beta-alpha_zinc_fingers; title=ZBTB7A ZINC FINGER DOMAIN BOUND TO DNA DUPLEX CONTAINING GGACCC (OLIGO 20) organism=Homo sapiens DNA sequence DG(E1):DC(D16) DG(E2):DC(D15) DG(E3):DC(D14) DA(E4):DT(D13) DC(E5):DG(D12) DC(E6):DG(D11) DC(E7):DG(D10) DT(E8):DA(D9) DT(E9):DA(D8) DG(E10):DC(D7) DA(E11):DT(D6) DT(E12):DA(D5) DG(E13):DC(D4) DT(E14):DA(D3) DT(E15):DA(D2) DT(E16):DA(D1) DG(Y1):DC(X16) DG(Y2):DC(X15) DG(Y3):DC(X14) DA(Y4):DT(X13) DC(Y5):DG(X12) DC(Y6):DG(X11) DC(Y7):DG(X10) DT(Y8):DA(X9) DT(Y9):DA(X8) DG(Y10):DC(X7) DA(Y11):DT(X6) DT(Y12):DA(X5) DG(Y13):DC(X4) DT(Y14):DA(X3) DT(Y15):DA(X2) DT(Y16):DA(X1) chainA ( 16) ALA394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LYS396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 5 0 0 0 0 0 0 0 0 0 0 ( 43) ARG421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 3 0 0 0 0 0 0 0 0 0 ( 45) ASP423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 ( 46) LYS424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 chainB ( 18) LYS396 0 7 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG399 0 0 0 5 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG421 0 0 0 1 6 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ASP423 0 0 0 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) LYS424 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kafqkcpicekviqgAgKlpRhirthtgekpyecnickvrftRqDKlkvhmrkhtg/kafqkcpicekviqgagKlpRhirthtgekpyecnickvrftRqDKlkvhmrkhtgekpylcqqcgaafahnydlknhmrvhtglrpyqcdsccktfvrsdhlhrhlkkdgcn >7n5w_A:beta-beta-alpha_zinc_fingers; title=ZBTB7A ZINC FINGER DOMAIN BOUND TO DNA DUPLEX CONTAINING GGACCC (OLIGO 23) organism=Homo sapiens DNA sequence DG(Y2):DC(X14) DG(Y3):DC(X13) DA(Y4):DT(X12) DC(Y5):DG(X11) DC(Y6):DG(X10) DC(Y7):DG(X9) DT(Y8):DA(X8) DT(Y9):DA(X7) DC(Y10):DG(X6) DA(Y11):DT(X5) DT(Y12):DA(X4) DG(Y13):DC(X3) DT(Y14):DA(X2) DT(Y15):DA(X1) DT(Y16):DA(X0) chainA ( 16) GLN392 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LYS396 5 4 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG399 0 0 5 11 13 0 0 0 0 0 0 0 0 0 0 ( 45) ARG421 0 0 0 2 11 7 0 0 0 0 0 0 0 0 0 ( 47) ASP423 0 0 5 9 2 0 0 0 0 0 0 0 0 0 0 ( 48) LYS424 0 0 0 0 2 7 6 0 0 0 0 0 0 0 0 prot.sequence lgsafqkcpicekviqgagKlpRhirthtgekpyecnickvrftRqDKlkvhmrkhtgekpylcqqcgaafahnydlknhmrvht >7n8n_A:Histone-fold; title=MELBOURNEVIRUS NUCLEOSOME LIKE PARTICLE organism=MELBOURNEVIRUS DNA sequence DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DA(J64):DT(I-64) chainA ( 59) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ARG203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dhvsvgetqipkastqhllrkagslsaagdtevpirgfvhmklhklvqksllamqlakRktimksdvkkaaelmhlpvfaiptkdsgakgsvflscrqkgagsagtgsetnsqevrsqmkstcliipkErfrtmakeiskkeghdvhiaeaaldmlqvivesctvrllekalvitysgkRtrvtskdietafmlehg >7n8n_ABCD:Histone-fold; title=MELBOURNEVIRUS NUCLEOSOME LIKE PARTICLE organism=MELBOURNEVIRUS DNA sequence DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DA(J64):DT(I-64) chainA ( 59) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ARG203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 3) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ARG132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 59) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ARG203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 58) LYS87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ARG132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dhvsvgetqipkastqhllrkagslsaagdtevpirgfvhmklhklvqksllamqlakRktimksdvkkaaelmhlpvfaiptkdsgakgsvflscrqkgagsagtgsetnsqevrsqmkstcliipkErfrtmakeiskkeghdvhiaeaaldmlqvivesctvrllekalvitysgkRtrvtskdietafmlehg/rkRdksvnfrlglrnmlaqihpdisvqtealselsniavflgkkishgavtllpegtktikssavllaagdlygkdlgrhavgemtkavtrygsakeskegsRsskaklqisvarserllrehggcsrvsegaavalaaaieyfmgevlelagnaardskkvrisvkhitlaiqndaalfavvgkgvfsgagvslisvpipr/dhvsvgetqipkastqhllrkagslsaagdtevpirgfvhmklhklvqksllamqlakRktimksdvkkaaelmhlpvfaiptkdsgakgsvflscrqkgagsagtgsetnsqevrsqmkstcliipkerfrtmakeiskkeghdvhiaeaaldmlqvivesctvrllekalvitysgkRtrvtskdietafmlehg/rkrdksvnfrlglrnmlaqihpdisvqtealselsniavflgkkishgavtllpegtKtikssavllaagdlygkdlgrhavgemtkavtrygsakeskegsRsskaklqisvarserllrehggcsRvsegaavalaaaieyfmgevlelagnaardskkvrisvkhitlaiqndaalfavvgkgvfsgagvslisvpipr >7n8n_B:Histone-fold; title=MELBOURNEVIRUS NUCLEOSOME LIKE PARTICLE organism=MELBOURNEVIRUS DNA sequence DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DA(J64):DT(I-64) chainB ( 3) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ARG132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rkRdksvnfrlglrnmlaqihpdisvqtealselsniavflgkkishgavtllpegtktikssavllaagdlygkdlgrhavgemtkavtrygsakeskegsRsskaklqisvarserllrehggcsrvsegaavalaaaieyfmgevlelagnaardskkvrisvkhitlaiqndaalfavvgkgvfsgagvslisvpipr >7n8s_A:DNase_I-like; title=LINE-1 ENDONUCLEASE DOMAIN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(C1):DC(D14) DC(C2):DG(D13) DT(C3):DA(D12) DC(C4):DG(D11) DC(C5):DG(D10) DT(C6):DA(D9) DT(C7):DA(D8) DT(C8):DA(D7) DT(C9):DA(D6) DT(C10):DA(D5) DA(C11):DT(D4) DA(C12):DT(D3) DG(C13):DC(D2) DG(C14):DC(D1) chainA (112) ASN118 0 0 0 0 0 0 0 0 0 0 5 2 0 0 (191) PRO197 0 0 0 0 0 0 0 0 0 5 5 0 0 0 (192) HIS198 0 0 0 0 0 0 0 0 0 0 1 6 5 0 prot.sequence hitiltlninglnsaikrhrlaswiksqdpsvcciqethltcrdthrlkikgwrkiyqangkqkkagvailvsdktdfkptkikrdkeghyimvkgsiqqeeltilniyapNtgaprfikqvlsdlqrdldshtlimgafntplstldrstrqkvnkdtqelnsalhqadlidiyrtlhpksteytffsaPHhtyskidhivgskallskckrteiitnklsdhsaiklelr >7n94_B:DNase_I-like; title=LINE-1 ENDONUCLEASE DOMAIN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(F1):DC(G17) DC(F2):DG(G16) DT(F3):DA(G15) DC(F4):DG(G14) DC(F5):DG(G13) DT(F6):DA(G12) DT(F7):DA(G11) DT(F8):DA(G10) DT(F9):DA(G9) DT(F10):DA(G8) DA(F11):DT(G7) DA(F12):DT(G6) DG(F13):DC(G5) DG(F14):DC(G4) DG(F15):DC(G3) DC(F16):DG(G2) DT(F17):DA(G1) chainB (112) ASN118 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (191) PRO197 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 (192) HIS198 0 0 0 0 0 0 0 0 0 0 1 8 8 0 0 0 0 prot.sequence hitiltlninglnsaikrhrlaswiksqdpsvcciqethltcrdthrlkikgwrkiyqangkqkkagvailvsdktdfkptkikrdkeghyimvkgsiqqeeltilniyapNtgaprfikqvlsdlqrdldshtlimgafntplstldrstrqkvnkdtqelnsalhqadlidiyrtlhpksteytffsaPHhtyskidhivgskallskckrteiitnklsdhsaiklelr >7ne3_A: title=HUMAN TET2 IN COMPLEX WITH FAVOURABLE DNA SUBSTRATE. organism=COLINUS VIRGINIANUS DNA sequence DA(B1):DT(C12) DC(B2):DG(C11) DA(B3):DT(C10) DC(B4):DG(C9) DA(B5):DT(C8) 5CM(B6):DG(C7) DG(B7):5CM(C6) DT(B8):DA(C5) DG(B9):DC(C4) DT(B10):DA(C3) DG(B11):DC(C2) chainA (128) ARG1261 0 0 0 0 0 15 0 0 0 0 0 (153) SER1286 0 0 0 0 0 2 0 0 0 0 0 (158) TRP1291 0 0 0 0 4 0 0 0 0 0 0 (160) MET1293 0 0 0 0 44 5 0 0 0 0 0 (161) TYR1294 0 0 0 0 0 15 59 0 0 0 0 (162) TYR1295 0 0 0 0 0 0 6 1 0 0 0 (169) ARG1302 0 0 0 0 0 0 0 5 6 0 0 (239) THR1372 0 0 0 0 0 8 0 0 0 0 0 (251) ASP1384 0 0 0 0 0 8 0 0 0 0 0 (253) HIS1386 0 0 0 0 0 5 0 0 0 0 0 (254) ASN1387 0 0 0 0 0 5 0 0 0 0 0 (391) VAL1900 0 0 0 0 0 2 0 0 0 0 0 (393) TYR1902 0 0 0 0 0 34 0 0 0 0 0 (395) HIS1904 0 0 0 0 0 11 0 0 0 0 0 prot.sequence scrcviiekdegpfythlgagpnvaaireimeerfgqkgkairierviytgkegkssqgcpiakwvvrrssseekllclvreraghtceaavivililvwegiplsladklyseltetlrkygtltnrrcalneertcacqgldpetcgasfsfgcsWsMYYngckfaRskiprkfkllgddpkeeekleshlqnlstlmaptykklapdaynnqieyehrapecrlglkegrpfsgvtacldfcahahrdlhnmqngstlvctltrednrefggkpedeqlhvlplykvsdvdefgsveaqeekkrsgaiqvlssfrrkvrmlaepvktcrgsdevwsdseqsfldpdiggvavapthgsiliecakrelhattplknpnrnhptrislvfyqhksmnepkhglalweakmaeka >7ne6_A: title=HUMAN TET2 IN COMPLEX WITH UNFAVOURABLE DNA SUBSTRATE. organism=COLINUS VIRGINIANUS DNA sequence DC(C2):DG(B11) DA(C3):DT(B10) DG(C4):DC(B9) DG(C5):DC(B8) 5CM(C6):DG(B7) DG(C7):5CM(B6) DC(C8):DG(B5) DC(C9):DG(B4) DT(C10):DA(B3) DG(C11):DC(B2) DT(C12):DA(B1) chainA (125) ARG1261 0 0 0 0 0 15 0 0 0 0 0 (150) SER1286 0 0 0 0 0 2 0 0 0 0 0 (155) TRP1291 0 0 0 0 0 0 5 0 0 0 0 (157) MET1293 0 0 0 0 0 5 20 0 0 0 0 (158) TYR1294 0 0 0 0 116 14 0 0 0 0 0 (159) TYR1295 0 0 0 2 12 0 0 0 0 0 0 (166) ARG1302 0 0 1 1 0 0 0 0 0 0 0 (236) THR1372 0 0 0 0 0 9 0 0 0 0 0 (248) ASP1384 0 0 0 0 0 10 0 0 0 0 0 (250) HIS1386 0 0 0 0 0 5 0 0 0 0 0 (251) ASN1387 0 0 0 0 0 5 0 0 0 0 0 (388) VAL1900 0 0 0 0 0 2 0 0 0 0 0 (390) TYR1902 0 0 0 0 0 35 0 0 0 0 0 (392) HIS1904 0 0 0 0 0 10 0 0 0 0 0 prot.sequence scrcekdegpfythlgagpnvaaireimeerfgqkgkairierviytgkegkssqgcpiakwvvrrssseekllclvreraghtceaavivililvwegiplsladklyseltetlrkygtltnrrcalneertcacqgldpetcgasfsfgcsWSMYYngckfaRskiprkfkllgddpkeeekleshlqnlstlmaptykklapdaynnqieyehrapecrlglkegrpfsgvtacldfcahahrdlhnmqngstlvctltrednrefggkpedeqlhvlplykvsdvdefgsveaqeekkrsgaiqvlssfrrkvrmlaepvktcrgsdevwsdseqsfldpdiggvavapthgsiliecakrelhattplknpnrnhptrislvfyqhKsmnepkhglalweakmaekarekee >7nfc_ABC:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=CRYO-EM STRUCTURE OF NHEJ SUPER-COMPLEX (DIMER) organism=HOMO SAPIENS DNA sequence DG(E18):DG(D38) DC(E19):DG(D37) DT(E20):DG(D36) DA(E21):DT(D35) DA(E22):DT(D34) DT(E23):DA(D33) DA(E24):DT(D32) DA(E25):DT(D31) DA(E26):DT(D30) DC(E27):DG(D29) DT(E28):DA(D28) DA(E29):DT(D27) DA(E30):DT(D26) DA(E31):DT(D25) DA(E32):DT(D24) DA(E33):DT(D23) DC(E34):DG(D22) DT(E35):DA(D21) DA(E36):DT(D20) DT(E37):DA(D19) DT(E38):DA(D18) DA(E39):DT(D17) DT(E40):DA(D16) DT(E41):DA(D15) DA(E42):DA(D14) DT(E43):DC(D13) DG(E44):DC(D12) chainA (115) LYS124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (116) ILE125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (249) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 3 1 0 0 0 0 0 (424) SER450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (426) LYS452 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (722) LYS835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (726) ASN839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (2271) LYS2738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (2274) LEU2741 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (2275) MET2742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (2278) ARG2745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 16 (2279) LYS2746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (2282) ALA2749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 chainB (205) ARG258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 (228) LEU281 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) LYS287 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) THR298 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (184) HIS243 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) TYR295 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) TYR397 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakcKIpaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiinkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqdrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqySpKmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladslnhllydefvksvlkivekldltleiqanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsfnkvvlkhlKktkNlssneaisleeirirvvqmlgslggqinknllmmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcftspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiasldlsckqlasgllelafafgglcerlvslllnpavlstsvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpffleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrtrqsfvdrslltllwhcsldalreffstivvdaidvlktfdtqitkkmgyykildvmysrlpneltktliklcydaftenlerrrlyhcaayncaisviccvfnelkfyqrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasengegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdtdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltgrtdllrlrrrfmrdqeKlsLMyaRKgvAeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrlllppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsekiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgedsekviaglyqrafqhlseavqaaeeeagvidaymtladfcdqqlrkeeeaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiisseststghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelavnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkgsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwldvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwmxxxxxxxxxxxxxxxxxxxx/ysgrdsliflvdaskamftpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisskledllrkvraketrkralsRlklklnkdivisvgiynlvqkaLkpppiKlyretnepvkTktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpfatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsspfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieifqldiiihslkkcdislqfflpfsteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierHsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvYclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaardeaaavalsslihalddldmvaivryaYdkranpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlf >7nfc_FGH:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=CRYO-EM STRUCTURE OF NHEJ SUPER-COMPLEX (DIMER) organism=HOMO SAPIENS DNA sequence DC(J12):DG(I44) DA(J13):DT(I43) DT(J14):DA(I42) DA(J15):DT(I41) DA(J16):DT(I40) DT(J17):DA(I39) DA(J18):DT(I38) DA(J19):DT(I37) DT(J20):DA(I36) DA(J21):DT(I35) DG(J22):DC(I34) DT(J23):DA(I33) DT(J24):DA(I32) DT(J25):DA(I31) DT(J26):DA(I30) DT(J27):DA(I29) DA(J28):DT(I28) DG(J29):DC(I27) DT(J30):DA(I26) DT(J31):DA(I25) DT(J32):DA(I24) DA(J33):DT(I23) DT(J34):DA(I22) DT(J35):DA(I21) DG(J36):DT(I20) DG(J37):DC(I19) DG(J38):DG(I18) chainF (159) ASP168 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) GLU214 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) VAL306 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2266) LYS2738 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2270) MET2742 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2271) TYR2743 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2273) ARG2745 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2274) LYS2746 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (208) LYS253 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG254 0 0 0 0 0 0 0 0 0 0 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) THR300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (290) GLU335 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (227) ARG242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (250) LYS265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (258) LYS273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (345) GLN360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 (385) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 prot.sequence csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipDtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrEpklpvlagclkglssllcnftksmeedpqtsreifnfvlqidlkryavpsaglrlfalhasqfstclldnyvslfevllkwcahtnVelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiinkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqdrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladslnhllydefvksvlkivekldltleiqanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsfnkvvlkhlkktknlsleeirirvvqmlgslggqinknllmmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcftspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiasldlsckqlasgllelafafgglcerlvslllnpavlstsvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpffleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrtrqsfvdrslltllwhcsldalreffstivvdaidvlktfdtqitkkmgyykildvmysrlpneltktliklcydaftenlerrrlyhcaayncaisviccvfnelkfyqrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasengegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdtdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltgrtdllrlrrrfmrdqeKlslMYaRKgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrlllppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsekiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgedsekviaglyqrafqhlseavqaaeeeagvidaymtladfcdqqlrkeeeaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiisseststghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelavnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkgsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwldvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwmxxxxxxxxxxxxxxxxxxxx/ysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisskledllrkvraketrKRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktkTrtfntstgglllpsdtkrsqiygsrqiilekeetEelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkieRhsihwpcrltigsnlsiriaayKsilqervKktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnQvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplienpaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkflapk >7nfc_H:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=CRYO-EM STRUCTURE OF NHEJ SUPER-COMPLEX (DIMER) organism=HOMO SAPIENS DNA sequence DG(I18):DG(J38) DC(I19):DG(J37) DT(I20):DG(J36) DA(I21):DT(J35) DA(I22):DT(J34) DT(I23):DA(J33) DA(I24):DT(J32) DA(I25):DT(J31) DA(I26):DT(J30) DC(I27):DG(J29) DT(I28):DA(J28) DA(I29):DT(J27) DA(I30):DT(J26) DA(I31):DT(J25) DA(I32):DT(J24) DA(I33):DT(J23) DC(I34):DG(J22) DT(I35):DA(J21) DA(I36):DT(J20) DT(I37):DA(J19) DT(I38):DA(J18) DA(I39):DT(J17) DT(I40):DA(J16) DT(I41):DA(J15) DA(I42):DT(J14) DT(I43):DA(J13) DG(I44):DC(J12) chainH (227) ARG242 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) LYS265 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) LYS273 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) GLN360 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkieRhsihwpcrltigsnlsiriaayKsilqervKktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnQvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplienpaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkflapk >7nfe_ABC: title=CRYO-EM STRUCTURE OF NHEJ SUPER-COMPLEX (MONOMER) organism=HOMO SAPIENS DNA sequence DA(D22):DA(E33) DT(D23):DT(E32) DA(D24):DT(E31) DA(D25):DT(E30) DA(D26):DG(E29) DC(D27):DA(E28) DT(D28):DT(E27) DA(D29):DT(E26) DA(D30):DT(E25) DA(D31):DT(E24) DA(D32):DT(E23) DC(D34):DG(E22) DT(D35):DA(E21) DA(D36):DT(E20) DT(D38):DA(E19) DA(D39):DT(E17) DT(D40):DA(E16) DT(D41):DA(E15) chainA chainB (195) ARG254 0 0 0 0 0 0 0 0 3 7 8 0 0 0 0 0 0 0 (344) ARG403 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 chainC (359) ARG400 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence csllrlqetlsaadgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkkipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkryavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladeassseslnhllydefvksvlkivekldltleiqmiptsdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegvspdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsaaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatpmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekpqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiappsldlsckqlasgllelafafgglcerlvslllnpavlstsvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftkestfdtqitkkmgyykildvmysrddvhakeskinqvfneltktliklcydaftenmllerrrlyhcaayncaisviccvfnelkfyqgflfpeknllifenlidlkrmdelnrhecmapltalvkhmhrsllpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfdnsvgiqllgivmandlppydpseyfqalvnnmsfvrykevyaaaaevlglilryvleeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwraqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrpdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgsssedsekviaglyqrafqhlseavqaaeeeaaagvidaymtladfcdqqlrkeeelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelakkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaayappceykdwltkmdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavardhniraqepesglseetqvkclmdqatdpnilgrtwegwepwmxxxxxxxxxxxxxxxxxxxxxxxxxxxx/ysgrdsliflvdaskamfeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednpakasrartkagdlrdtgifldlmhlkkgfdislfyrdiiskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdtmsnespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclnddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeif >7nfe_C:SPOC_domain-like;vWA-like; title=CRYO-EM STRUCTURE OF NHEJ SUPER-COMPLEX (MONOMER) organism=? DNA sequence DA(D22):DA(E33) DT(D23):DT(E32) DA(D24):DT(E31) DA(D25):DT(E30) DA(D26):DG(E29) DC(D27):DA(E28) DT(D28):DT(E27) DA(D29):DT(E26) DA(D30):DT(E25) DA(D31):DT(E24) DA(D32):DT(E23) DC(D34):DG(E22) DT(D35):DA(E21) DA(D36):DT(E20) DT(D38):DA(E19) DA(D39):DT(E17) DT(D40):DA(E16) DT(D41):DA(E15) chainC (359) ARG400 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nkaavvlcmdtmsnespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclnddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeif >7nkx_f:Histone-fold; title=RNA POLYMERASE II-SPT4/5-NUCLEOSOME-CHD1 STRUCTURE organism=? DNA sequence DG(N-66):DG(T54) DT(N-64):DA(T53) DT(N-63):DG(T52) DT(N-62):DC(T51) DT(N-61):DT(T50) DT(N-60):DT(T49) DT(N-59):DG(T48) DC(N-58):DG(T47) DT(N-57):DA(T46) DG(N-56):DC(T45) DG(N-44):DC(T44) DA(N-43):DT(T43) DG(N-42):DC(T42) DA(N-41):DT(T41) DC(N-40):DG(T40) DT(N-39):DA(T39) DA(N-38):DT(T38) DG(N-37):DC(T37) DG(N-36):DC(T36) DG(N-35):DC(T35) DA(N-34):DT(T34) DG(N-33):DC(T33) DT(N-32):DA(T32) DA(N-31):DT(T31) DA(N-30):DT(T30) DT(N-29):DA(T29) DC(N-28):DG(T28) DC(N-26):DG(T26) DC(N-25):DG(T25) DT(N-24):DA(T24) DT(N-23):DA(T23) DG(N-22):DC(T22) DG(N-21):DC(T21) DC(N-20):DG(T20) DG(N-19):DC(T19) DT(N-17):DC(T18) DT(N-16):DA(T17) DA(N-15):DT(T15) DA(N-14):DT(T14) DA(N-13):DT(T13) DA(N-12):DT(T12) DC(N-11):DG(T11) DG(N-10):DC(T10) DC(N-9):DG(T9) DG(N-8):DC(T8) DG(N-7):DC(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DA(N-3):DT(T3) DC(N-2):DG(T2) DA(N-1):DT(T1) DG(N0):DC(T0) DC(N1):DG(T-1) DG(N2):DC(T-2) DC(N3):DG(T-3) DG(N4):DC(T-4) DT(N5):DA(T-5) DA(N6):DT(T-6) DC(N7):DG(T-7) DG(N8):DC(T-8) DT(N9):DA(T-9) DG(N10):DC(T-10) DC(N11):DG(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DT(N14):DA(T-14) DT(N15):DA(T-15) DA(N16):DT(T-16) DA(N17):DT(T-17) DG(N18):DC(T-18) DC(N19):DG(T-19) DG(N20):DC(T-20) DG(N21):DC(T-21) DT(N22):DA(T-22) DG(N23):DC(T-23) DC(N24):DG(T-24) DT(N25):DA(T-25) DA(N26):DT(T-26) DG(N27):DC(T-27) DA(N28):DT(T-28) DG(N29):DC(T-29) DC(N30):DG(T-30) DT(N31):DA(T-31) DG(N32):DC(T-32) DT(N33):DA(T-33) DC(N34):DG(T-34) DT(N35):DA(T-35) DA(N36):DT(T-36) DC(N37):DG(T-37) DG(N38):DC(T-38) DA(N39):DT(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DA(N42):DT(T-42) DA(N43):DT(T-43) DT(N44):DA(T-44) DT(N45):DA(T-45) DG(N46):DC(T-46) DA(N47):DT(T-47) DG(N48):DC(T-48) DC(N49):DG(T-49) DG(N50):DC(T-50) DG(N51):DC(T-51) DC(N52):DG(T-52) DC(N53):DG(T-53) DT(N54):DA(T-54) DC(N55):DG(T-55) DG(N56):DC(T-56) DG(N57):DC(T-57) DC(N58):DG(T-58) DA(N59):DT(T-59) DC(N60):DG(T-60) DC(N61):DG(T-61) DG(N62):DC(T-62) DG(N63):DC(T-63) DG(N64):DC(T-64) DA(N65):DT(T-65) DT(N66):DA(T-66) DT(N67):DA(T-67) DT(N69):DA(T-69) DG(N70):DC(T-70) DA(N71):DT(T-71) DT(N72):DA(T-72) chainf ( 55) LYS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrKtvtamdvvyalkrqgrtlygfgg >7nky_e:Histone-fold; title=RNA POLYMERASE II-SPT4/5-NUCLEOSOME-FACT STRUCTURE organism=? DNA sequence DC(N-75):DA(T64) DT(N-74):DA(T63) DA(N-73):DA(T62) DG(N-72):DA(T61) DC(N-71):DA(T60) DA(N-70):DA(T59) DC(N-69):DG(T58) DG(N-67):DA(T57) DG(N-66):DC(T56) DG(N-65):DA(T55) DT(N-54):DG(T54) DG(N-53):DC(T53) DT(N-52):DA(T52) DC(N-51):DG(T51) DT(N-50):DA(T50) DG(N-49):DC(T49) DC(N-48):DG(T48) DT(N-47):DA(T47) DT(N-46):DA(T46) DA(N-45):DT(T45) DT(N-44):DA(T44) DC(N-43):DG(T43) DG(N-42):DC(T42) DG(N-41):DC(T41) DT(N-40):DA(T40) DA(N-39):DT(T39) DG(N-38):DC(T38) DA(N-37):DT(T37) DG(N-36):DC(T36) DT(N-35):DA(T35) DG(N-34):DC(T34) DT(N-33):DA(T33) DC(N-32):DG(T32) DA(N-31):DT(T31) DA(N-30):DT(T30) DT(N-29):DA(T29) DC(N-28):DG(T28) DC(N-27):DG(T27) DC(N-26):DG(T26) DC(N-25):DG(T25) DT(N-24):DA(T24) DT(N-23):DA(T23) DG(N-22):DC(T22) DG(N-21):DC(T21) DC(N-20):DG(T20) DG(N-19):DC(T19) DG(N-18):DC(T18) DT(N-17):DA(T17) DT(N-16):DA(T16) DA(N-15):DT(T15) DA(N-14):DT(T14) DA(N-13):DT(T13) DA(N-12):DT(T12) DC(N-11):DG(T11) DG(N-10):DC(T10) DC(N-9):DG(T9) DG(N-8):DC(T8) DG(N-7):DC(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DA(N-3):DT(T3) DC(N-2):DG(T2) DA(N-1):DT(T1) DG(N0):DC(T0) DC(N1):DG(T-1) DG(N2):DC(T-2) DC(N3):DG(T-3) DG(N4):DC(T-4) DT(N5):DA(T-5) DA(N6):DT(T-6) DC(N7):DG(T-7) DG(N8):DC(T-8) DT(N9):DA(T-9) DG(N10):DC(T-10) DC(N11):DG(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DT(N14):DA(T-14) DT(N15):DA(T-15) DA(N16):DT(T-16) DA(N17):DT(T-17) DG(N18):DC(T-18) DC(N19):DG(T-19) DG(N20):DC(T-20) DG(N21):DC(T-21) DT(N22):DA(T-22) DG(N23):DC(T-23) DC(N24):DG(T-24) DT(N25):DA(T-25) DA(N26):DT(T-26) DG(N27):DC(T-27) DA(N28):DT(T-28) DG(N29):DC(T-29) DC(N30):DG(T-30) DT(N31):DA(T-31) DG(N32):DC(T-32) DT(N33):DA(T-33) DC(N34):DG(T-34) DT(N35):DA(T-35) DA(N36):DT(T-36) DC(N37):DG(T-37) DG(N38):DC(T-38) DA(N39):DT(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DA(N42):DT(T-42) DA(N43):DT(T-43) DT(N44):DA(T-44) DT(N45):DA(T-45) DG(N46):DC(T-46) DA(N47):DT(T-47) DG(N48):DC(T-48) DC(N49):DG(T-49) DG(N50):DC(T-50) DG(N51):DC(T-51) DC(N52):DG(T-52) DC(N53):DG(T-53) DT(N54):DA(T-54) DC(N55):DG(T-55) DG(N56):DC(T-56) DG(N57):DC(T-57) DC(N58):DG(T-58) DA(N59):DT(T-59) DC(N60):DG(T-60) DC(N61):DG(T-61) DG(N62):DC(T-62) DG(N63):DC(T-63) DG(N64):DC(T-64) DA(N65):DT(T-65) DT(N66):DA(T-66) DT(N67):DA(T-67) DC(N68):DG(T-68) DT(N69):DA(T-69) DG(N70):DC(T-70) DA(N71):DT(T-71) DT(N72):DA(T-72) chaine ( 1) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence HRyRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirg >7nl0_A:Histone-fold; title=CRYO-EM STRUCTURE OF THE LIN28B NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DC(J-67):DG(I67) DT(J-66):DA(I66) DT(J-65):DA(I65) DG(J-64):DC(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DA(J-60):DT(I60) DA(J-59):DT(I59) DT(J-58):DA(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DC(J-55):DG(I55) DT(J-54):DA(I54) DG(J-53):DC(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DG(J-50):DC(I50) DG(J-49):DC(I49) DA(J-48):DT(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DT(J-44):DA(I44) DT(J-43):DA(I43) DC(J-42):DG(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DA(J-39):DT(I39) DG(J-38):DC(I38) DT(J-37):DA(I37) DG(J-36):DC(I36) DA(J-35):DT(I35) DT(J-34):DA(I34) DG(J-33):DC(I33) DG(J-32):DC(I32) DC(J-31):DG(I31) DA(J-30):DT(I30) DG(J-29):DC(I29) DC(J-28):DG(I28) DT(J-27):DA(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DC(J-22):DG(I22) DC(J-21):DG(I21) DT(J-20):DA(I20) DT(J-19):DA(I19) DT(J-18):DA(I18) DC(J-17):DG(I17) DC(J-16):DG(I16) DT(J-15):DA(I15) DT(J-14):DA(I14) DC(J-13):DG(I13) DT(J-12):DA(I12) DT(J-11):DA(I11) DC(J-10):DG(I10) DC(J-9):DG(I9) DT(J-8):DA(I8) DT(J-7):DA(I7) DC(J-6):DG(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DT(J-2):DA(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DA(J1):DT(I-1) DC(J2):DG(I-2) DT(J3):DA(I-3) DA(J4):DT(I-4) DC(J5):DG(I-5) DA(J6):DT(I-6) DT(J7):DA(I-7) DT(J8):DA(I-8) DT(J9):DA(I-9) DA(J10):DT(I-10) DT(J11):DA(I-11) DT(J12):DA(I-12) DC(J13):DG(I-13) DA(J14):DT(I-14) DG(J15):DC(I-15) DC(J16):DG(I-16) DA(J17):DT(I-17) DT(J18):DA(I-18) DC(J19):DG(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DA(J23):DT(I-23) DT(J24):DA(I-24) DT(J25):DA(I-25) DG(J26):DC(I-26) DT(J27):DA(I-27) DT(J28):DA(I-28) DG(J29):DC(I-29) DG(J30):DC(I-30) DA(J31):DT(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DA(J34):DT(I-34) DA(J35):DT(I-35) DG(J36):DC(I-36) DT(J37):DA(I-37) DT(J38):DA(I-38) DC(J39):DG(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DT(J42):DA(I-42) DG(J43):DC(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DA(J46):DT(I-46) DA(J47):DT(I-47) DT(J48):DA(I-48) DA(J49):DT(I-49) DC(J50):DG(I-50) DT(J51):DA(I-51) DC(J52):DG(I-52) DA(J53):DT(I-53) DC(J54):DG(I-54) DC(J55):DG(I-55) DA(J56):DT(I-56) DC(J57):DG(I-57) DT(J58):DA(I-58) DG(J59):DC(I-59) chainA ( 2) HIS39 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera >7nl0_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE LIN28B NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DC(J-67):DG(I67) DT(J-66):DA(I66) DT(J-65):DA(I65) DG(J-64):DC(I64) DC(J-63):DG(I63) DA(J-62):DT(I62) DC(J-61):DG(I61) DA(J-60):DT(I60) DA(J-59):DT(I59) DT(J-58):DA(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DC(J-55):DG(I55) DT(J-54):DA(I54) DG(J-53):DC(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DG(J-50):DC(I50) DG(J-49):DC(I49) DA(J-48):DT(I48) DC(J-47):DG(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DT(J-44):DA(I44) DT(J-43):DA(I43) DC(J-42):DG(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DA(J-39):DT(I39) DG(J-38):DC(I38) DT(J-37):DA(I37) DG(J-36):DC(I36) DA(J-35):DT(I35) DT(J-34):DA(I34) DG(J-33):DC(I33) DG(J-32):DC(I32) DC(J-31):DG(I31) DA(J-30):DT(I30) DG(J-29):DC(I29) DC(J-28):DG(I28) DT(J-27):DA(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DC(J-22):DG(I22) DC(J-21):DG(I21) DT(J-20):DA(I20) DT(J-19):DA(I19) DT(J-18):DA(I18) DC(J-17):DG(I17) DC(J-16):DG(I16) DT(J-15):DA(I15) DT(J-14):DA(I14) DC(J-13):DG(I13) DT(J-12):DA(I12) DT(J-11):DA(I11) DC(J-10):DG(I10) DC(J-9):DG(I9) DT(J-8):DA(I8) DT(J-7):DA(I7) DC(J-6):DG(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DT(J-2):DA(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DA(J1):DT(I-1) DC(J2):DG(I-2) DT(J3):DA(I-3) DA(J4):DT(I-4) DC(J5):DG(I-5) DA(J6):DT(I-6) DT(J7):DA(I-7) DT(J8):DA(I-8) DT(J9):DA(I-9) DA(J10):DT(I-10) DT(J11):DA(I-11) DT(J12):DA(I-12) DC(J13):DG(I-13) DA(J14):DT(I-14) DG(J15):DC(I-15) DC(J16):DG(I-16) DA(J17):DT(I-17) DT(J18):DA(I-18) DC(J19):DG(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DA(J23):DT(I-23) DT(J24):DA(I-24) DT(J25):DA(I-25) DG(J26):DC(I-26) DT(J27):DA(I-27) DT(J28):DA(I-28) DG(J29):DC(I-29) DG(J30):DC(I-30) DA(J31):DT(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DA(J34):DT(I-34) DA(J35):DT(I-35) DG(J36):DC(I-36) DT(J37):DA(I-37) DT(J38):DA(I-38) DC(J39):DG(I-39) DC(J40):DG(I-40) DA(J41):DT(I-41) DT(J42):DA(I-42) DG(J43):DC(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DA(J46):DT(I-46) DA(J47):DT(I-47) DT(J48):DA(I-48) DA(J49):DT(I-49) DC(J50):DG(I-50) DT(J51):DA(I-51) DC(J52):DG(I-52) DA(J53):DT(I-53) DC(J54):DG(I-54) DC(J55):DG(I-55) DA(J56):DT(I-56) DC(J57):DG(I-57) DT(J58):DA(I-58) DG(J59):DC(I-59) chainA ( 2) HIS39 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/rsrkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7npf_ABCDEFGH:P-loop_containing_nucleoside_triphosphate_hydrolases; title=VIBRIO CHOLERAE PARA2-ATPYS-DNA FILAMENT organism=VIBRIO CHOLERAE DNA sequence DA(I2):DT(J50) DA(I3):DT(J49) DA(I4):DT(J48) DA(I5):DT(J47) DA(I6):DT(J46) DA(I7):DT(J45) DA(I8):DT(J44) DA(I9):DT(J43) DA(I10):DT(J42) DA(I11):DT(J41) DA(I12):DT(J40) DA(I13):DT(J39) DA(I14):DT(J38) DA(I15):DT(J37) DA(I16):DT(J36) DA(I17):DT(J35) DA(I18):DT(J34) DA(I19):DT(J33) DA(I20):DT(J32) DA(I21):DT(J31) DA(I22):DT(J30) DA(I23):DT(J29) DA(I24):DT(J28) DA(I25):DT(J27) DA(I26):DT(J26) DA(I27):DT(J25) DA(I28):DT(J24) DA(I29):DT(J23) DA(I30):DT(J22) DA(I31):DT(J21) DA(I32):DT(J20) DA(I33):DT(J19) DA(I34):DT(J18) DA(I35):DT(J17) DA(I36):DT(J16) DA(I37):DT(J15) DA(I38):DT(J14) DA(I39):DT(J13) DA(I40):DT(J12) DA(I41):DT(J11) DA(I42):DT(J10) DA(I43):DT(J9) DA(I44):DT(J8) DA(I45):DT(J7) DA(I46):DT(J6) DA(I47):DT(J5) DA(I48):DT(J4) DA(I49):DT(J3) DA(I50):DT(J2) chainA chainB ( 75) ASN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) HIS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 76) HIS79 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 75) ASN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) HIS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 76) HIS79 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 75) ASN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 76) HIS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 76) HIS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 75) ASN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 ( 76) HIS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 0 0 0 0 0 prot.sequence kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnanhysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfeggkktlataqdavqksalelervlhshwsslnqg/kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnaNHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfgkktlataqdavqksalelervlhshwsslnqg/kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnanHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfeggkktlataqdavqksalelervlhshwsslnqg/kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnaNHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfgkktlataqdavqksalelervlhshwsslnqg/kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnanHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfeggkktlataqdavqksalelervlhshwsslnqg/kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnaNHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfgkktlataqdavqksalelervlhshwsslnqg/kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnanHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfeggkktlataqdavqksalelervlhshwsslnqg/kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnaNHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfgkktlataqdavqksalelervlhshwsslnqg >7npf_H:P-loop_containing_nucleoside_triphosphate_hydrolases; title=VIBRIO CHOLERAE PARA2-ATPYS-DNA FILAMENT organism=VIBRIO CHOLERAE DNA sequence DA(I2):DT(J50) DA(I3):DT(J49) DA(I4):DT(J48) DA(I5):DT(J47) DA(I6):DT(J46) DA(I7):DT(J45) DA(I8):DT(J44) DA(I9):DT(J43) DA(I10):DT(J42) DA(I11):DT(J41) DA(I12):DT(J40) DA(I13):DT(J39) DA(I14):DT(J38) DA(I15):DT(J37) DA(I16):DT(J36) DA(I17):DT(J35) DA(I18):DT(J34) DA(I19):DT(J33) DA(I20):DT(J32) DA(I21):DT(J31) DA(I22):DT(J30) DA(I23):DT(J29) DA(I24):DT(J28) DA(I25):DT(J27) DA(I26):DT(J26) DA(I27):DT(J25) DA(I28):DT(J24) DA(I29):DT(J23) DA(I30):DT(J22) DA(I31):DT(J21) DA(I32):DT(J20) DA(I33):DT(J19) DA(I34):DT(J18) DA(I35):DT(J17) DA(I36):DT(J16) DA(I37):DT(J15) DA(I38):DT(J14) DA(I39):DT(J13) DA(I40):DT(J12) DA(I41):DT(J11) DA(I42):DT(J10) DA(I43):DT(J9) DA(I44):DT(J8) DA(I45):DT(J7) DA(I46):DT(J6) DA(I47):DT(J5) DA(I48):DT(J4) DA(I49):DT(J3) DA(I50):DT(J2) chainH ( 75) ASN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 ( 76) HIS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 0 0 0 0 0 prot.sequence kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnaNHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfgkktlataqdavqksalelervlhshwsslnqg >7nqf_A:Prim-pol_domain; title=PRIM-POL DOMAIN OF CRISPR-ASSOCIATED PRIM-POL (CAPP) FROM MARINITOGA SP. 1137 WITH DSDNA organism=? DNA sequence DC(C1):DG(D6) DG(C2):DC(D5) DT(C3):DG(D4) DG(C4):DT(D3) DC(C5):DG(D2) DG(C6):DC(D1) chainA ( 28) TYR138 25 0 0 0 0 0 ( 29) ARG139 1 0 0 0 0 0 (164) ASN274 0 1 0 0 0 0 (165) LEU275 10 0 0 0 0 0 prot.sequence psqnaikrfmtlfsgredvfsiqyeggYRpirrplnfqdiknhfsgkktlgiYllkkndtvkfaaydidikkhylnredkfvyeenskkvakrlsrelnlenithyfeftgnrgyhiwiffdipvsaykikyimekildrieleegidveifpkqtslngglgNLivplgvhkktgkkclfvdndfnvienqieflnnikenkateinklfreifne >7nv1_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN POL KAPPA HOLOENZYME WITH UB-PCNA organism=HOMO SAPIENS DNA sequence DA(P1):DT(T25) DG(P2):DC(T24) DC(P3):DG(T23) DT(P4):DA(T22) DA(P5):DT(T21) DT(P6):DA(T20) DG(P7):DC(T19) DA(P8):DT(T18) DC(P9):DG(T17) DC(P10):DG(T16) DA(P11):DT(T15) DT(P12):DA(T14) DG(P13):DC(T13) DA(P14):DT(T12) DT(P15):DA(T11) DT(P16):DA(T10) DA(P17):DT(T9) DC(P18):DG(T8) DG(P19):DC(T7) DA(P20):DT(T6) DA(P21):DT(T5) DT(P22):DA(T4) DT(P23):DA(T3) DG(P24):DC(T2) DOC(P25):DG(T1) TTP(A901):DA(T0) chainA ( 63) ASP107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 66) ALA110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 67) PHE111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 68) TYR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 91) MET135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ( 93) SER137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 94) THR138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 97) TYR141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (100) ARG144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (106) ALA150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (154) ASP198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (227) LYS328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (315) GLU419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (365) THR469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence kgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsMlstsnyharrfgvraampgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfiknsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthlterksmsvErtfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiklknvnfevkTrastvssvvstaeeifaiakellkteidadfphplrlrlmgvrissfpneedrkhqqrsiigflq >7nv1_AB:DNA_clamp; title=HUMAN POL KAPPA HOLOENZYME WITH UB-PCNA organism=HOMO SAPIENS DNA sequence DA(P1):DT(T25) DG(P2):DC(T24) DC(P3):DG(T23) DT(P4):DA(T22) DA(P5):DT(T21) DT(P6):DA(T20) DG(P7):DC(T19) DA(P8):DT(T18) DC(P9):DG(T17) DC(P10):DG(T16) DA(P11):DT(T15) DT(P12):DA(T14) DG(P13):DC(T13) DA(P14):DT(T12) DT(P15):DA(T11) DT(P16):DA(T10) DA(P17):DT(T9) DC(P18):DG(T8) DG(P19):DC(T7) DA(P20):DT(T6) DA(P21):DT(T5) DT(P22):DA(T4) DT(P23):DA(T3) DG(P24):DC(T2) DOC(P25):DG(T1) TTP(A901):DA(T0) chainB chainA ( 63) ASP107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ( 66) ALA110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 67) PHE111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 68) TYR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 91) MET135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ( 93) SER137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 94) THR138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 97) TYR141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (100) ARG144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (106) ALA150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (154) ASP198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (227) LYS328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (315) GLU419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (365) THR469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence kgsrfygnelkkekqvnqrienmmqqkaqitsqqlrkaqlqvdrfameleqsrnlsntivhidmdafyaavemrdnpelkdkpiavgsmsMlstsnyharrfgvraampgfiakrlcpqliivppnfdkyravskevkeiladydpnfmamsldeaylnitkhleerqnwpedkrryfiknsvvfgtsaqevvkeirfrieqkttltasagiapntmlakvcsdknkpngqyqilpnrqavmdfikdlpirkvsgigkvtekmlkalgiitctelyqqrallsllfsetswhyflhislglgsthlterksmsvErtfseinkaeeqyslcqelcselaqdlqkerlkgrtvtiklknvnfevkTrastvssvvstaeeifaiakellkteidadfphplrlrlmgvrissfpneedrkhqqrsiigflq/mfearlvqgsilkkvlealkdlineacwdisssgvnlqsmdsshvslvqltlrsegfdtyrcdrnlamgvnltsmskilkcagnediitlRaednadtlalvfeapekvsdyemklmdldveqlgipeqeyscvvkmpsgefaricrdlshigdavviscakdgvkfsasgelgngniklsqteeeavtiemnepvqltfalrylnfftkatplsstvtlsmsadvplvveykiadmghlkyylapki >7nvr_7AEMORU:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;Eukaryotic_RPB5_N-terminal_domain;RPB5-like_RNA_polymerase_subunit; title=HUMAN MEDIATOR WITH RNA POLYMERASE II PRE-INITIATION COMPLEX organism=HOMO SAPIENS / SUS SCROFA DNA sequence DC(T-54):DG(N54) DA(T-53):DT(N53) DG(T-52):DC(N52) DA(T-51):DT(N51) DC(T-50):DG(N50) DA(T-49):DT(N49) DG(T-48):DC(N48) DC(T-47):DG(N47) DG(T-46):DC(N46) DA(T-45):DT(N45) DT(T-44):DA(N44) DG(T-43):DC(N43) DC(T-42):DG(N42) DG(T-41):DC(N41) DG(T-40):DC(N40) DA(T-39):DT(N39) DA(T-38):DT(N38) DG(T-37):DC(N37) DA(T-36):DT(N36) DG(T-35):DC(N35) DA(T-34):DT(N34) DG(T-33):DC(N33) DT(T-32):DA(N32) DG(T-31):DC(N31) DA(T-30):DT(N30) DG(T-29):DC(N29) DG(T-28):DC(N28) DA(T-27):DT(N27) DC(T-26):DG(N26) DG(T-25):DC(N25) DA(T-24):DT(N24) DA(T-23):DT(N23) DC(T-22):DG(N22) DG(T-21):DC(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DC(T-17):DG(N17) DC(T-16):DG(N16) DC(T-15):DG(N15) DC(T-14):DG(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DC(T-11):DG(N11) DC(T-10):DG(N10) DC(T-9):DG(N9) DC(T-8):DG(N8) DT(T-7):DA(N7) DT(T-6):DA(N6) DT(T-5):DA(N5) DT(T-4):DA(N4) DA(T-3):DT(N3) DT(T-2):DA(N2) DA(T-1):DT(N1) DG(T0):DC(N0) DC(T1):DG(N-1) DC(T2):DG(N-2) DC(T3):DG(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DT(T7):DA(N-7) DT(T8):DA(N-8) DC(T9):DG(N-9) chain7 (494) LYS609 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (514) HIS629 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA chainE chainM chainO ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 7 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 chainR (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqissHggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggcgryqprirrsglelyaewkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivQdtltavrkftkrdvflergEvmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlnknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitrhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq/tcpnhpdailvedyragdmicpecglvvgdrvidvgsewrttmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqveeeplnseddvsdeegqelfdtenvvvcqydkihrsknkwkfhlkdgimnlngrdyifskaigdaew >7nvs_AMORU:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=RNA POLYMERASE II CORE PRE-INITIATION COMPLEX WITH CLOSED PROMOTER DNA IN PROXIMAL POSITION organism=HOMO SAPIENS / SUS SCROFA DNA sequence DA(T-39):DT(N39) DA(T-38):DT(N38) DG(T-37):DC(N37) DA(T-36):DT(N36) DG(T-35):DC(N35) DA(T-34):DT(N34) DG(T-33):DC(N33) DT(T-32):DA(N32) DG(T-31):DC(N31) DA(T-30):DT(N30) DG(T-29):DC(N29) DG(T-28):DC(N28) DA(T-27):DT(N27) DC(T-26):DG(N26) DG(T-25):DC(N25) DA(T-24):DT(N24) DA(T-23):DT(N23) DC(T-22):DG(N22) DG(T-21):DC(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DC(T-17):DG(N17) DC(T-16):DG(N16) DC(T-15):DG(N15) DC(T-14):DG(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DC(T-11):DG(N11) DC(T-10):DG(N10) DC(T-9):DG(N9) DC(T-8):DG(N8) DT(T-7):DA(N7) DT(T-6):DA(N6) DT(T-5):DA(N5) DT(T-4):DA(N4) DA(T-3):DT(N3) DT(T-2):DA(N2) DA(T-1):DT(N1) DG(T0):DC(N0) DC(T1):DG(N-1) DC(T2):DG(N-2) DC(T3):DG(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DT(T7):DA(N-7) DT(T8):DA(N-8) DC(T9):DG(N-9) chainA chainM chainO ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 10 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 chainR (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggcgryqprirrsglelyaewkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlnknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitrhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/tcpnhpdailvedyragdmicpecglvvgdrvidvgsewrttmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFAavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqveeeplnseddvsdeegqelfdtenvvvcqydkihrsknkwkfhlkdgimnlngrdyifskaigdaew >7nvt_AMORU:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=RNA POLYMERASE II CORE PRE-INITIATION COMPLEX WITH CLOSED PROMOTER DNA IN DISTAL POSITION organism=HOMO SAPIENS / SUS SCROFA DNA sequence DG(N-9):DC(T9) DA(N-8):DT(T8) DA(N-7):DT(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DG(N-3):DC(T3) DG(N-2):DC(T2) DG(N-1):DC(T1) DC(N0):DG(T0) DT(N1):DA(T-1) DA(N2):DT(T-2) DT(N3):DA(T-3) DA(N4):DT(T-4) DA(N5):DT(T-5) DA(N6):DT(T-6) DA(N7):DT(T-7) DG(N8):DC(T-8) DG(N9):DC(T-9) DG(N10):DC(T-10) DG(N11):DC(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DG(N14):DC(T-14) DG(N15):DC(T-15) DG(N16):DC(T-16) DG(N17):DC(T-17) DG(N18):DC(T-18) DC(N19):DG(T-19) DG(N20):DC(T-20) DC(N21):DG(T-21) DG(N22):DC(T-22) DT(N23):DA(T-23) DT(N24):DA(T-24) DC(N25):DG(T-25) DG(N26):DC(T-26) DT(N27):DA(T-27) DC(N28):DG(T-28) DC(N29):DG(T-29) DT(N30):DA(T-30) DC(N31):DG(T-31) DA(N32):DT(T-32) DC(N33):DG(T-33) DT(N34):DA(T-34) DC(N35):DG(T-35) DT(N36):DA(T-36) DC(N37):DG(T-37) DT(N38):DA(T-38) DT(N39):DA(T-39) DC(N40):DG(T-40) chainA (156) ARG192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM chainO ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 0 8 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggcgryqpriRrsglelyaewkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlnknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitrhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/tcpnhpdailvedyragdmicpecglvvgdrvidvgsewrttmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcSnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFAavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqveeeplnseddvsdeegqelfdtenvvvcqydkihrsknkwkfhlkdgimnlngrdyifskaigdaew >7nvv_7:P-loop_containing_nucleoside_triphosphate_hydrolases; title=XPB-CONTAINING PART OF TFIIH IN A POST-TRANSLOCATED STATE (WITH ADP- BEF3) organism=HOMO SAPIENS DNA sequence DT(N34):DA(T-34) DC(N35):DG(T-35) DT(N36):DA(T-36) DC(N37):DG(T-37) DT(N38):DA(T-38) DT(N39):DA(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DG(N42):DC(T-42) DC(N43):DG(T-43) DA(N44):DT(T-44) DT(N45):DA(T-45) DC(N46):DG(T-46) DG(N47):DC(T-47) DC(N48):DG(T-48) DT(N49):DA(T-49) DG(N50):DC(T-50) DT(N51):DA(T-51) DC(N52):DG(T-52) DT(N53):DA(T-53) DG(N54):DC(T-54) DC(N55):DG(T-55) DG(N56):DC(T-56) DA(N57):DT(T-57) DG(N58):DC(T-58) chain7 (300) HIS415 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (494) LYS609 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 (514) HIS629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlgHttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqissHggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat >7nvw_7:P-loop_containing_nucleoside_triphosphate_hydrolases; title=TFIIH IN A PRE-TRANSLOCATED STATE (WITHOUT ADP-BEF3) organism=HOMO SAPIENS DNA sequence DT(N34):DA(T-34) DC(N35):DG(T-35) DT(N36):DA(T-36) DC(N37):DG(T-37) DT(N38):DA(T-38) DT(N39):DA(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DG(N42):DC(T-42) DC(N43):DG(T-43) DA(N44):DT(T-44) DT(N45):DA(T-45) DC(N46):DG(T-46) DG(N47):DC(T-47) DC(N48):DG(T-48) DT(N49):DA(T-49) DG(N50):DC(T-50) DT(N51):DA(T-51) DC(N52):DG(T-52) DT(N53):DA(T-53) DG(N54):DC(T-54) chain7 (494) LYS609 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 (514) HIS629 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqissHggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat >7nvx_7:P-loop_containing_nucleoside_triphosphate_hydrolases; title=TFIIH IN A POST-TRANSLOCATED STATE (WITH ADP-BEF3) organism=HOMO SAPIENS DNA sequence DC(T-70):DG(N70) DA(T-69):DT(N69) DA(T-68):DT(N68) DC(T-67):DG(N67) DA(T-66):DT(N66) DG(T-65):DC(N65) DC(T-64):DG(N64) DT(T-63):DA(N63) DG(T-62):DC(N62) DG(T-61):DC(N61) DC(T-60):DG(N60) DC(T-59):DG(N59) DC(T-58):DG(N58) DT(T-57):DA(N57) DC(T-56):DG(N56) DG(T-55):DC(N55) DC(T-54):DG(N54) DA(T-53):DT(N53) DG(T-52):DC(N52) DA(T-51):DT(N51) DC(T-50):DG(N50) DA(T-49):DT(N49) DG(T-48):DC(N48) DC(T-47):DG(N47) DG(T-46):DC(N46) chain7 (300) HIS415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (494) LYS609 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 (514) HIS629 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlgHttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqissHggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat >7nvy_7AMORU:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Eukaryotic_RPB5_N-terminal_domain;RPB5-like_RNA_polymerase_subunit; title=RNA POLYMERASE II PRE-INITIATION COMPLEX WITH CLOSED PROMOTER DNA IN PROXIMAL POSITION organism=HOMO SAPIENS / SUS SCROFA DNA sequence DC(T-54):DG(N54) DA(T-53):DT(N53) DG(T-52):DC(N52) DA(T-51):DT(N51) DC(T-50):DG(N50) DA(T-49):DT(N49) DG(T-48):DC(N48) DC(T-47):DG(N47) DG(T-46):DC(N46) DA(T-45):DT(N45) DT(T-44):DA(N44) DG(T-43):DC(N43) DC(T-42):DG(N42) DG(T-41):DC(N41) DG(T-40):DC(N40) DA(T-39):DT(N39) DA(T-38):DT(N38) DG(T-37):DC(N37) DA(T-36):DT(N36) DG(T-35):DC(N35) DA(T-34):DT(N34) DG(T-33):DC(N33) DT(T-32):DA(N32) DG(T-31):DC(N31) DA(T-30):DT(N30) DG(T-29):DC(N29) DG(T-28):DC(N28) DA(T-27):DT(N27) DC(T-26):DG(N26) DG(T-25):DC(N25) DA(T-24):DT(N24) DA(T-23):DT(N23) DC(T-22):DG(N22) DG(T-21):DC(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DC(T-17):DG(N17) DC(T-16):DG(N16) DC(T-15):DG(N15) DC(T-14):DG(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DC(T-11):DG(N11) DC(T-10):DG(N10) DC(T-9):DG(N9) DC(T-8):DG(N8) DT(T-7):DA(N7) DT(T-6):DA(N6) DT(T-5):DA(N5) DT(T-4):DA(N4) DA(T-3):DT(N3) DT(T-2):DA(N2) DA(T-1):DT(N1) DG(T0):DC(N0) DC(T1):DG(N-1) DC(T2):DG(N-2) DC(T3):DG(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DT(T7):DA(N-7) DT(T8):DA(N-8) DC(T9):DG(N-9) chain7 (494) LYS609 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (514) HIS629 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA chainM chainO ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 9 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 chainR (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqissHggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggcgryqprirrsglelyaewkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivQdtltavrkftkrdvflergEvmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlnknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitrhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/tcpnhpdailvedyragdmicpecglvvgdrvidvgsewrttmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFAavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqveeeplnseddvsdeegqelfdtenvvvcqydkihrsknkwkfhlkdgimnlngrdyifskaigdaew >7nvz_7AMORU:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;Eukaryotic_RPB5_N-terminal_domain;RPB5-like_RNA_polymerase_subunit; title=RNA POLYMERASE II PRE-INITIATION COMPLEX WITH CLOSED PROMOTER DNA IN DISTAL POSITION organism=HOMO SAPIENS / SUS SCROFA DNA sequence DC(T-54):DG(N54) DA(T-53):DT(N53) DG(T-52):DC(N52) DA(T-51):DT(N51) DC(T-50):DG(N50) DA(T-49):DT(N49) DG(T-48):DC(N48) DC(T-47):DG(N47) DG(T-46):DC(N46) DA(T-45):DT(N45) DT(T-44):DA(N44) DG(T-43):DC(N43) DC(T-42):DG(N42) DG(T-41):DC(N41) DG(T-40):DC(N40) DA(T-39):DT(N39) DA(T-38):DT(N38) DG(T-37):DC(N37) DA(T-36):DT(N36) DG(T-35):DC(N35) DA(T-34):DT(N34) DG(T-33):DC(N33) DT(T-32):DA(N32) DG(T-31):DC(N31) DA(T-30):DT(N30) DG(T-29):DC(N29) DG(T-28):DC(N28) DA(T-27):DT(N27) DC(T-26):DG(N26) DG(T-25):DC(N25) DA(T-24):DT(N24) DA(T-23):DT(N23) DC(T-22):DG(N22) DG(T-21):DC(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DC(T-17):DG(N17) DC(T-16):DG(N16) DC(T-15):DG(N15) DC(T-14):DG(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DC(T-11):DG(N11) DC(T-10):DG(N10) DC(T-9):DG(N9) DC(T-8):DG(N8) DT(T-7):DA(N7) DT(T-6):DA(N6) DT(T-5):DA(N5) DT(T-4):DA(N4) DA(T-3):DT(N3) DT(T-2):DA(N2) DA(T-1):DT(N1) DG(T0):DC(N0) DC(T1):DG(N-1) DC(T2):DG(N-2) DC(T3):DG(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DT(T7):DA(N-7) DT(T8):DA(N-8) DC(T9):DG(N-9) chain7 (296) SER411 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) HIS415 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) LYS418 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (494) LYS609 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (514) HIS629 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (156) ARG192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM chainO ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 chainR (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistySmlgHttKrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqissHggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggcgryqpriRrsglelyaewkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlnknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitrhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/tcpnhpdailvedyragdmicpecglvvgdrvidvgsewrttmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcSnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFAavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqveeeplnseddvsdeegqelfdtenvvvcqydkihrsknkwkfhlkdgimnlngrdyifskaigdaew >7nw0_7ABEMORU:Cyclin-like;Zinc_beta-ribbon;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Eukaryotic_RPB5_N-terminal_domain;RPB5-like_RNA_polymerase_subunit; title=RNA POLYMERASE II PRE-INITIATION COMPLEX WITH OPEN PROMOTER DNA organism=HOMO SAPIENS / SUS SCROFA DNA sequence DG(N-9):DC(T9) DA(N-8):DT(T8) DA(N-7):DT(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DG(N-3):DC(T3) DG(N-2):DC(T2) DG(N-1):DC(T1) DC(N0):DG(T0) DT(N1):DA(T-1) DA(N2):DT(T-2) DT(N3):DA(T-3) DA(N4):DT(T-4) DA(N5):DT(T-5) DA(N6):DT(T-6) DA(N7):DT(T-7) DG(N8):DC(T-8) DG(N9):DC(T-9) DG(N10):DC(T-10) DG(N11):DC(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DG(N14):DC(T-14) DG(N15):DC(T-15) DG(N16):DC(T-16) DG(N17):DC(T-17) DG(N18):DC(T-18) DC(N33):DG(T-33) DT(N34):DA(T-34) DC(N35):DG(T-35) DT(N36):DA(T-36) DC(N37):DG(T-37) DT(N38):DA(T-38) DT(N39):DA(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DG(N42):DC(T-42) DC(N43):DG(T-43) DA(N44):DT(T-44) DT(N45):DA(T-45) DC(N46):DG(T-46) DG(N47):DC(T-47) DC(N48):DG(T-48) DT(N49):DA(T-49) DT(N51):DA(T-51) DC(N52):DG(T-52) DT(N53):DA(T-53) DG(N54):DC(T-54) DC(N55):DG(T-55) DG(N56):DC(T-56) DA(N57):DT(T-57) DG(N58):DC(T-58) DG(N59):DC(T-59) DG(N60):DC(T-60) DC(N61):DG(T-61) DC(N62):DG(T-62) DA(N63):DT(T-63) DG(N64):DC(T-64) DC(N65):DG(T-65) DT(N66):DA(T-66) DG(N67):DC(T-67) DT(N68):DA(T-68) DT(N69):DA(T-69) DG(N70):DC(T-70) chain7 (494) LYS609 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 (514) HIS629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 chainA (1352) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE chainM ( 87) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) VAL283 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) THR284 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 0 8 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqissHggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggcgryqprirrsglelyaewkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlnknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/deitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqappryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq/tcpnhpdailvedyragdmicpecglvvgdrvidvgsewrtftkdpsrvgdsqnpllsdgdlstmigkgtgaasfdefgnskyqnrRtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadVTirqsyrliyprapdlfptdfkfdtpvdklpql/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/tvpklyrsviedvindvrdiflddgvdeqvlmelktlwenklmgqveeeplnseddvsdeegqelfdtenvvvcqydkihrsknkwkfhlkdgimnlngrdyifskaigdaew >7nx5_AB:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF THE EPSTEIN-BARR VIRUS PROTEIN ZEBRA (BZLF1, ZTA) BOUND TO A METHYLATED DNA DUPLEX organism=Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) DNA sequence DC(C-8):DG(D8) DT(C-7):DA(D7) DT(C-6):DA(D6) DC(C-5):DG(D5) DA(C-4):DT(D4) DT(C-3):DA(D3) 5CM(C-2):DG(D2) DG(C-1):5CM(D1) DC(C0):DG(D0) DT(C1):DA(D-1) DC(C2):DG(D-2) DA(C3):DT(D-3) DG(C4):DC(D-4) DT(C5):DA(D-5) DG(C6):DC(D-6) DC(C7):DG(D-7) chainA ( 5) LYS178 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ASN182 0 0 0 0 0 4 10 3 0 0 0 0 0 0 0 0 ( 12) ALA185 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 13) SER186 0 0 0 0 0 1 6 5 0 0 0 0 0 0 0 0 ( 16) SER189 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 ( 17) ARG190 0 0 0 0 0 0 3 8 12 11 0 0 0 0 0 0 chainB ( 3) LYS178 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 ( 7) ASN182 0 0 0 0 0 0 0 0 0 2 5 6 1 0 0 0 ( 10) ALA185 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 11) SER186 0 0 0 0 0 0 0 0 1 6 0 1 0 0 0 0 ( 14) SER189 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 15) ARG190 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 prot.sequence mleiKrykNrvASrkSRakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtp/eiKrykNrvASrkSRakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtpd >7nx5_F:Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF THE EPSTEIN-BARR VIRUS PROTEIN ZEBRA (BZLF1, ZTA) BOUND TO A METHYLATED DNA DUPLEX organism=Epstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8) DNA sequence DA(H-5):DT(G5) DC(H-4):DG(G4) DT(H-3):DA(G3) DG(H-2):DC(G2) DA(H-1):DT(G1) DG(H0):DC(G0) 5CM(H1):DG(G-1) DG(H2):5CM(G-2) DA(H3):DT(G-3) DT(H4):DA(G-4) DG(H5):DC(G-5) chainF ( 9) ASN182 0 0 0 0 0 0 5 9 4 0 0 ( 12) ALA185 0 0 0 0 0 0 0 0 0 2 0 ( 13) SER186 0 0 0 0 0 0 2 0 1 0 0 ( 16) SER189 0 0 0 0 0 0 0 0 3 0 0 prot.sequence mleikrykNrvASrkSrakfkqllqhyrevaaakssendrlrlllkqmcpsldvdsiiprtp >7nyw_ABF:P-loop_containing_nucleoside_triphosphate_hydrolases;MukF_C-terminal_domain-like; title=CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA HEAD MODULE organism=PHOTORHABDUS THRACENSIS DNA sequence DA(M1):DT(N32) DT(M2):DA(N31) DA(M3):DT(N30) DT(M4):DA(N29) DA(M5):DT(N28) DT(M6):DA(N27) DA(M7):DT(N26) DT(M8):DA(N25) DA(M9):DT(N24) DT(M10):DA(N23) DA(M11):DT(N22) DT(M12):DA(N21) DA(M13):DT(N20) DT(M14):DA(N19) DA(M15):DT(N18) DT(M16):DA(N17) DA(M17):DT(N16) DT(M18):DA(N15) DA(M19):DT(N14) DT(M20):DA(N13) DA(M21):DT(N12) DT(M22):DA(N11) DA(M23):DT(N10) DT(M24):DA(N9) DA(M25):DT(N8) DT(M26):DA(N7) DA(M27):DT(N6) DT(M28):DA(N5) DA(M29):DT(N4) DT(M30):DA(N3) chainA ( 55) THR56 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 55) THR56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (717) GLN1327 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 71) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 72) THR80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence iergkfrsltlvnwngffartfdldelvttlsggngagksttmaafvtalipdlTllhfrntteagatsgsrdkglhgklragvcystldvinsrhqrvvvgvrlqqvagrdrkvdikpfmiqglptaiqptqlltenvgerqarvlplnelkdrldemegvqfkqfnsitdyhaqmfdlgvipkrlrsasdrskfyrlieaslyggissaitrslrdyllpensgvrkafqdmeaalrenritleairvtqsdrdlfkhliteatsyvsadymrhanerrthldealalrgelfgshkqlateqmenvqkklrklerdyyqireqvvsakagwcavmrmvkdngverrlhrrelaymeggalrsmsdkalgalrlavadnehlrdalrlsedpkrperkvqffiavyqhlrerirqdiirtddpvdaieqmeielarlteeltareqklaissksvaniirktiqreqnrirmlnqglqavsfgqvrgvrlnvnvreshailldvlseqqeqhqdlfnsqrltfseamaklyqrlnpqvdmgqrlpqtigeelldyrnyleldvevnrgsdgwlkaesgalstgeaigtgmsilvmvvqsweeesrrlrgkdispcrllfldqaarldaksiatlfelcerlqmqliiaapenispekgttyklvrkvfknhehvhvvglrgfg/iergkfrsltlvnwngffartfdldelvttlsggngagksttmaafvtalipdlTllhfrntteagatsgsrdkglhgklragvcystldvinsrhqrvvvgvrlqqvagrdrkvdikpfmiqglptaiqptqlltenvgerqarvlplnelkdrldemegvqfkqfnsitdyhaqmfdlgvipkrlrsasdrskfyrlieaslyggissaitrslrdyllpensgvrkafqdmeaalrenritleairvtqsdrdlfkhliteatsyvsadymrhanerrthldealalrgelfgshkqlateqalslsvneggerrmemrqeleqlkqkiqsltarapvwlaaqdtlnqlceqsgetlassndvteymqqllerereatverdevaaqkrelekqierllealnlerdalaeryatlsfdvqkiqrahqafsqfvgkhlsvafdtdpeaeirelrqrhtelerevsrfedqtqqqrmenvqkklrklerdyyqireqvvsakagwcavmrmvkdngverrlhrrelaymeggalrsmsdkalgalrlavadnehlrdalrlsedpkrperkvqffiavyqhlrerirqdiirtddpvdaieqmeielarlteeltareqklaissksvaniirktiqreqnrirmlnqglqavsfgqvrgvrlnvnvreshailldvlseqqeqhqdlfnsqrltfseamaklyqrlnpqvdmgQrlpqtigeelldyrnyleldvevnrgsdgwlkaesgalstgeaigtgmsilvmvvqsweeesrrlrgkdispcrllfldqaarldaksiatlfelcerlqmqliiaapenispekgttyklvrkvfknhehvhvvglrgfg/fmpvklaqalanslfpeldsqlragrhigiddldnhaflmdfqeqleefyarynvelirapegffylrprSTtliprsvlseldmmvgkilcylylsperlanqgiftsqelyeelisladegklmkfvnqrssgsdldkqklqekvrttlnrlrrlgmvyflpnnnnkftiteavfrfgadvrsgddpreiqlrmir >7nyw_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA HEAD MODULE organism=PHOTORHABDUS THRACENSIS DNA sequence DA(N3):DT(M30) DT(N4):DA(M29) DA(N5):DT(M28) DT(N6):DA(M27) DA(N7):DT(M26) DT(N8):DA(M25) DA(N9):DT(M24) DT(N10):DA(M23) DA(N11):DT(M22) DT(N12):DA(M21) DA(N13):DT(M20) DT(N14):DA(M19) DA(N15):DT(M18) DT(N16):DA(M17) DA(N17):DT(M16) DT(N18):DA(M15) DA(N19):DT(M14) DT(N20):DA(M13) DA(N21):DT(M12) DT(N22):DA(M11) DA(N23):DT(M10) DT(N24):DA(M9) DA(N25):DT(M8) DT(N26):DA(M7) DA(N27):DT(M6) DT(N28):DA(M5) DA(N29):DT(M4) DT(N30):DA(M3) DA(N31):DT(M2) DT(N32):DA(M1) chainB ( 55) THR56 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (717) GLN1327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iergkfrsltlvnwngffartfdldelvttlsggngagksttmaafvtalipdlTllhfrntteagatsgsrdkglhgklragvcystldvinsrhqrvvvgvrlqqvagrdrkvdikpfmiqglptaiqptqlltenvgerqarvlplnelkdrldemegvqfkqfnsitdyhaqmfdlgvipkrlrsasdrskfyrlieaslyggissaitrslrdyllpensgvrkafqdmeaalrenritleairvtqsdrdlfkhliteatsyvsadymrhanerrthldealalrgelfgshkqlateqalslsvneggerrmemrqeleqlkqkiqsltarapvwlaaqdtlnqlceqsgetlassndvteymqqllerereatverdevaaqkrelekqierllealnlerdalaeryatlsfdvqkiqrahqafsqfvgkhlsvafdtdpeaeirelrqrhtelerevsrfedqtqqqrmenvqkklrklerdyyqireqvvsakagwcavmrmvkdngverrlhrrelaymeggalrsmsdkalgalrlavadnehlrdalrlsedpkrperkvqffiavyqhlrerirqdiirtddpvdaieqmeielarlteeltareqklaissksvaniirktiqreqnrirmlnqglqavsfgqvrgvrlnvnvreshailldvlseqqeqhqdlfnsqrltfseamaklyqrlnpqvdmgQrlpqtigeelldyrnyleldvevnrgsdgwlkaesgalstgeaigtgmsilvmvvqsweeesrrlrgkdispcrllfldqaarldaksiatlfelcerlqmqliiaapenispekgttyklvrkvfknhehvhvvglrgfg >7nyw_F: title=CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA HEAD MODULE organism=PHOTORHABDUS THRACENSIS DNA sequence DA(N3):DT(M30) DT(N4):DA(M29) DA(N5):DT(M28) DT(N6):DA(M27) DA(N7):DT(M26) DT(N8):DA(M25) DA(N9):DT(M24) DT(N10):DA(M23) DA(N11):DT(M22) DT(N12):DA(M21) DA(N13):DT(M20) DT(N14):DA(M19) DA(N15):DT(M18) DT(N16):DA(M17) DA(N17):DT(M16) DT(N18):DA(M15) DA(N19):DT(M14) DT(N20):DA(M13) DA(N21):DT(M12) DT(N22):DA(M11) DA(N23):DT(M10) DT(N24):DA(M9) DA(N25):DT(M8) DT(N26):DA(M7) DA(N27):DT(M6) DT(N28):DA(M5) DA(N29):DT(M4) DT(N30):DA(M3) DA(N31):DT(M2) DT(N32):DA(M1) chainF ( 71) SER79 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR80 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fmpvklaqalanslfpeldsqlragrhigiddldnhaflmdfqeqleefyarynvelirapegffylrprSTtliprsvlseldmmvgkilcylylsperlanqgiftsqelyeelisladegklmkfvnqrssgsdldkqklqekvrttlnrlrrlgmvyflpnnnnkftiteavfrfgadvrsgddpreiqlrmir >7nyw_IJ:P-loop_containing_nucleoside_triphosphate_hydrolases;MukF_C-terminal_domain-like; title=CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA HEAD MODULE organism=PHOTORHABDUS THRACENSIS DNA sequence DT(L1):DA(K80) DG(L2):DC(K79) DC(L3):DG(K78) DC(L4):DG(K77) DG(L5):DC(K76) DT(L6):DA(K75) DT(L7):DA(K74) DA(L8):DT(K73) DC(L9):DG(K72) DA(L10):DT(K71) DA(L11):DT(K70) DT(L12):DA(K69) DG(L13):DC(K68) DT(L14):DA(K67) DA(L15):DT(K66) DA(L16):DT(K65) DC(L17):DG(K64) DA(L18):DT(K63) DG(L19):DC(K62) DT(L20):DA(K61) DG(L21):DC(K60) DG(L22):DC(K59) chainI ( 72) GLN72 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG75 0 0 0 18 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA76 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LYS79 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 4 13 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 0 0 0 3 7 1 0 0 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 chainJ ( 72) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 75) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 15 19 0 0 0 0 ( 76) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 79) LYS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 0 0 0 0 16 12 3 0 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkyqqlenlecgwkwaylirkhqegepitkyiensaahaavdkliklesepvrvlewieqhmnpdlfnrmkQTiRArrKRhfnaehqhtrkkSiDldfpvwhrlsalsqrrgntlsetivqliedaerkekyan/mkyqqlenlecgwkwaylirkhqegepitkyiensaahaavdkliklesepvrvlewieqhmnpdlfnrmkQTiRArrKRhfnaehqhtrkkSiDldfpvwhrlsalsqrrgntlsetivqliedaerkekyanq >7nyw_J: title=CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA HEAD MODULE organism=PHOTORHABDUS THRACENSIS DNA sequence DC(K59):DG(L22) DC(K60):DG(L21) DA(K61):DT(L20) DC(K62):DG(L19) DT(K63):DA(L18) DG(K64):DC(L17) DT(K65):DA(L16) DT(K66):DA(L15) DA(K67):DT(L14) DC(K68):DG(L13) DA(K69):DT(L12) DT(K70):DA(L11) DT(K71):DA(L10) DG(K72):DC(L9) DT(K73):DA(L8) DA(K74):DT(L7) DA(K75):DT(L6) DC(K76):DG(L5) DG(K77):DC(L4) DG(K78):DC(L3) DC(K79):DG(L2) DA(K80):DT(L1) chainJ ( 72) GLN72 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG75 0 0 0 0 19 15 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA76 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LYS79 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 0 3 12 16 0 0 0 0 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 prot.sequence mkyqqlenlecgwkwaylirkhqegepitkyiensaahaavdkliklesepvrvlewieqhmnpdlfnrmkQTiRArrKRhfnaehqhtrkkSiDldfpvwhrlsalsqrrgntlsetivqliedaerkekyanq >7nyx_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA MONOMER (CLOSED CONFORMATION) organism=? DNA sequence DA(N3):DT(M30) DT(N4):DA(M29) DA(N5):DT(M28) DT(N6):DA(M27) DA(N7):DT(M26) DT(N8):DA(M25) DA(N9):DT(M24) DT(N10):DA(M23) DA(N11):DT(M22) DT(N12):DA(M21) DA(N13):DT(M20) DT(N14):DA(M19) DA(N15):DT(M18) DT(N16):DA(M17) DA(N17):DT(M16) DT(N18):DA(M15) DA(N19):DT(M14) DT(N20):DA(M13) DA(N21):DT(M12) DT(N22):DA(M11) DA(N23):DT(M10) DT(N24):DA(M9) DA(N25):DT(M8) DT(N26):DA(M7) DA(N27):DT(M6) DT(N28):DA(M5) DA(N29):DT(M4) DT(N30):DA(M3) DA(N31):DT(M2) DT(N32):DA(M1) chainA ( 55) THR56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence iergkfrsltlvnwngffartfdldelvttlsggngagksttmaafvtalipdlTllhfrntteagatsgsrdkglhgklragvcystldvinsrhqrvvvgvrlqqvagrdrkvdikpfmiqglptaiqptqlltenvgerqarvlplnelkdrldemegvqfkqfnsitdyhaqmfdlgvipkrlrsasdrskfyrlieaslyggissaitrslrdyllpensgvrkafqdmeaalrenritleairvtqsdrdlfkhliteatsyvsadymrhanerrthldealalrgelfgshkqlateqyrhvemarelaeqsgassdletdhqaasdhlnlvqtamrqqekidryqvdleelsyrleeqtdvveeagelqaeyearteateqevdelksqladyqqaldvqqtraiqyqqalqalerarelcrlpdlsvdnaeewletfqakeqqateallaleqklsvadaahnqfeqayqlvknivgetsrseawqsarellrdwpsqrhladrvqplrmrlseleqrlnnqqnaerllsefckrqgrqyqaedlealqnelearqealslsvneggerrmemrqeleqlkqkiqsltarapvwlaaqdtlnqlceqsgetlassndvteymqqllerereatverdevaaqkrelekqierlsqpsgaedsrmialaerfggvllseiydditiddapyfsalygparhgivvpdlslvrphletledcpedlyliegdpqsfddsvfnaeeqtnavlvkssdrqwrysrypelplfgraarenrlealnlerdalaeryatlsfdvqkiqrahqafsqfvgkhlsvafdtdpeaeirelrqrhtelerevsrfedqtqqqrqqyaqakeslttlnrlipqvtllldetlidrveevreemdeaqeaarflqqhgsaltklepmvavlqsdpqqheqlqqdyetakhsqhqakqqafalveivqrrvhfsysdsagmlsenadlndklrqrlehaesdrsrareqlrqqqaqysqfnqvlaslkssyetkqdmlkellqemkdigvqadanaemrarerrdrlhealsvnrsrvnqlekqiafceaemenvqkklrklerdyyqireqvvsakagwcavmrmvkdngverrlhrrelaymeggalrsmsdkalgalrlavadnehlrdalrlsedpkrperkvqffiavyqhlrerirqdiirtddpvdaieqmeielarlteeltareqklaissksvaniirktiqreqnrirmlnqglqavsfgqvrgvrlnvnvreshailldvlseqqeqhqdlfnsqrltfseamaklyqrlnpqvdmgqrlpqtigeelldyrnyleldvevnrgsdgwlkaesgalstgeaigtgmsilvmvvqsweeesrrlrgkdispcrllfldqaarldaksiatlfelcerlqmqliiaapenispekgttyklvrkvfknhehvhvvglrgfg >7nyx_ABF:P-loop_containing_nucleoside_triphosphate_hydrolases;MukF_C-terminal_domain-like; title=CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA MONOMER (CLOSED CONFORMATION) organism=PHOTORHABDUS THRACENSIS DNA sequence DA(M1):DT(N32) DT(M2):DA(N31) DA(M3):DT(N30) DT(M4):DA(N29) DA(M5):DT(N28) DT(M6):DA(N27) DA(M7):DT(N26) DT(M8):DA(N25) DA(M9):DT(N24) DT(M10):DA(N23) DA(M11):DT(N22) DT(M12):DA(N21) DA(M13):DT(N20) DT(M14):DA(N19) DA(M15):DT(N18) DT(M16):DA(N17) DA(M17):DT(N16) DT(M18):DA(N15) DA(M19):DT(N14) DT(M20):DA(N13) DA(M21):DT(N12) DT(M22):DA(N11) DA(M23):DT(N10) DT(M24):DA(N9) DA(M25):DT(N8) DT(M26):DA(N7) DA(M27):DT(N6) DT(M28):DA(N5) DA(M29):DT(N4) DT(M30):DA(N3) chainA ( 55) THR56 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (1326) GLN1327 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 71) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 72) THR80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence iergkfrsltlvnwngffartfdldelvttlsggngagksttmaafvtalipdlTllhfrntteagatsgsrdkglhgklragvcystldvinsrhqrvvvgvrlqqvagrdrkvdikpfmiqglptaiqptqlltenvgerqarvlplnelkdrldemegvqfkqfnsitdyhaqmfdlgvipkrlrsasdrskfyrlieaslyggissaitrslrdyllpensgvrkafqdmeaalrenritleairvtqsdrdlfkhliteatsyvsadymrhanerrthldealalrgelfgshkqlateqyrhvemarelaeqsgassdletdhqaasdhlnlvqtamrqqekidryqvdleelsyrleeqtdvveeagelqaeyearteateqevdelksqladyqqaldvqqtraiqyqqalqalerarelcrlpdlsvdnaeewletfqakeqqateallaleqklsvadaahnqfeqayqlvknivgetsrseawqsarellrdwpsqrhladrvqplrmrlseleqrlnnqqnaerllsefckrqgrqyqaedlealqnelearqealslsvneggerrmemrqeleqlkqkiqsltarapvwlaaqdtlnqlceqsgetlassndvteymqqllerereatverdevaaqkrelekqierlsqpsgaedsrmialaerfggvllseiydditiddapyfsalygparhgivvpdlslvrphletledcpedlyliegdpqsfddsvfnaeeqtnavlvkssdrqwrysrypelplfgraarenrlealnlerdalaeryatlsfdvqkiqrahqafsqfvgkhlsvafdtdpeaeirelrqrhtelerevsrfedqtqqqrqqyaqakeslttlnrlipqvtllldetlidrveevreemdeaqeaarflqqhgsaltklepmvavlqsdpqqheqlqqdyetakhsqhqakqqafalveivqrrvhfsysdsagmlsenadlndklrqrlehaesdrsrareqlrqqqaqysqfnqvlaslkssyetkqdmlkellqemkdigvqadanaemrarerrdrlhealsvnrsrvnqlekqiafceaemenvqkklrklerdyyqireqvvsakagwcavmrmvkdngverrlhrrelaymeggalrsmsdkalgalrlavadnehlrdalrlsedpkrperkvqffiavyqhlrerirqdiirtddpvdaieqmeielarlteeltareqklaissksvaniirktiqreqnrirmlnqglqavsfgqvrgvrlnvnvreshailldvlseqqeqhqdlfnsqrltfseamaklyqrlnpqvdmgqrlpqtigeelldyrnyleldvevnrgsdgwlkaesgalstgeaigtgmsilvmvvqsweeesrrlrgkdispcrllfldqaarldaksiatlfelcerlqmqliiaapenispekgttyklvrkvfknhehvhvvglrgfg/iergkfrsltlvnwngffartfdldelvttlsggngagksttmaafvtalipdltllhfrntteagatsgsrdkglhgklragvcystldvinsrhqrvvvgvrlqqvagrdrkvdikpfmiqglptaiqptqlltenvgerqarvlplnelkdrldemegvqfkqfnsitdyhaqmfdlgvipkrlrsasdrskfyrlieaslyggissaitrslrdyllpensgvrkafqdmeaalrenritleairvtqsdrdlfkhliteatsyvsadymrhanerrthldealalrgelfgshkqlateqyrhvemarelaeqsgassdletdhqaasdhlnlvqtamrqqekidryqvdleelsyrleeqtdvveeagelqaeyearteateqevdelksqladyqqaldvqqtraiqyqqalqalerarelcrlpdlsvdnaeewletfqakeqqateallaleqklsvadaahnqfeqayqlvknivgetsrseawqsarellrdwpsqrhladrvqplrmrlseleqrlnnqqnaerllsefckrqgrqyqaedlealqnelearqealslsvneggerrmemrqeleqlkqkiqsltarapvwlaaqdtlnqlceqsgetlassndvteymqqllerereatverdevaaqkrelekqierlsqpsgaedsrmialaerfggvllseiydditiddapyfsalygparhgivvpdlslvrphletledcpedlyliegdpqsfddsvfnaeeqtnavlvkssdrqwrysrypelplfgraarenrlealnlerdalaeryatlsfdvqkiqrahqafsqfvgkhlsvafdtdpeaeirelrqrhtelerevsrfedqtqqqrqqyaqakeslttlnrlipqvtllldetlidrveevreemdeaqeaarflqqhgsaltklepmvavlqsdpqqheqlqqdyetakhsqhqakqqafalveivqrrvhfsysdsagmlsenadlndklrqrlehaesdrsrareqlrqqqaqysqfnqvlaslkssyetkqdmlkellqemkdigvqadanaemrarerrdrlhealsvnrsrvnqlekqiafceaemenvqkklrklerdyyqireqvvsakagwcavmrmvkdngverrlhrrelaymeggalrsmsdkalgalrlavadnehlrdalrlsedpkrperkvqffiavyqhlrerirqdiirtddpvdaieqmeielarlteeltareqklaissksvaniirktiqreqnrirmlnqglqavsfgqvrgvrlnvnvreshailldvlseqqeqhqdlfnsqrltfseamaklyqrlnpqvdmgQrlpqtigeelldyrnyleldvevnrgsdgwlkaesgalstgeaigtgmsilvmvvqsweeesrrlrgkdispcrllfldqaarldaksiatlfelcerlqmqliiaapenispekgttyklvrkvfknhehvhvvglrgfg/fmpvklaqalanslfpeldsqlragrhigiddldnhaflmdfqeqleefyarynvelirapegffylrprSTtliprsvlseldmmvgkilcylylsperlanqgiftsqelyeelisladegklmkfvnqrssgsdldkqklqekvrttlnrlrrlgmvyflpnnnnkftiteavfrfgadvrsgddpreiqlrmir >7nyx_IJ:P-loop_containing_nucleoside_triphosphate_hydrolases;MukF_C-terminal_domain-like; title=CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA MONOMER (CLOSED CONFORMATION) organism=PHOTORHABDUS THRACENSIS DNA sequence DC(K59):DG(L22) DC(K60):DG(L21) DA(K61):DT(L20) DC(K62):DG(L19) DT(K63):DA(L18) DG(K64):DC(L17) DT(K65):DA(L16) DT(K66):DA(L15) DA(K67):DT(L14) DC(K68):DG(L13) DA(K69):DT(L12) DT(K70):DA(L11) DT(K71):DA(L10) DG(K72):DC(L9) DT(K73):DA(L8) DA(K74):DT(L7) DA(K75):DT(L6) DC(K76):DG(L5) DG(K77):DC(L4) DG(K78):DC(L3) DC(K79):DG(L2) DA(K80):DT(L1) chainI ( 72) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 75) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 18 0 0 0 ( 76) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 79) LYS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 10 10 5 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 72) GLN72 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG75 0 0 0 0 14 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA76 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LYS79 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 0 3 14 17 0 0 0 0 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 prot.sequence mkyqqlenlecgwkwaylirkhqegepitkyiensaahaavdkliklesepvrvlewieqhmnpdlfnrmkQTiRArrKRhfnaehqhtrkkSiDldfpvwhrlsalsqrrgntlsetivqliedaerkekyan/mkyqqlenlecgwkwaylirkhqegepitkyiensaahaavdkliklesepvrvlewieqhmnpdlfnrmkQTiRArrKRhfnaehqhtrkkSidldfpvwhrlsalsqrrgntlsetivqliedaerkekyanq >7nyz_ABF:P-loop_containing_nucleoside_triphosphate_hydrolases;MukF_C-terminal_domain-like; title=CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA MONOMER (PARTIALLY OPEN CONFORMATION) organism=PHOTORHABDUS THRACENSIS DNA sequence DA(M1):DT(N32) DT(M2):DA(N31) DA(M3):DT(N30) DT(M4):DA(N29) DA(M5):DT(N28) DT(M6):DA(N27) DA(M7):DT(N26) DT(M8):DA(N25) DA(M9):DT(N24) DT(M10):DA(N23) DA(M11):DT(N22) DT(M12):DA(N21) DA(M13):DT(N20) DT(M14):DA(N19) DA(M15):DT(N18) DT(M16):DA(N17) DA(M17):DT(N16) DT(M18):DA(N15) DA(M19):DT(N14) DT(M20):DA(N13) DA(M21):DT(N12) DT(M22):DA(N11) DA(M23):DT(N10) DT(M24):DA(N9) DA(M25):DT(N8) DT(M26):DA(N7) DA(M27):DT(N6) DT(M28):DA(N5) DA(M29):DT(N4) DT(M30):DA(N3) chainA ( 55) THR56 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (1326) GLN1327 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 71) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 72) THR80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence iergkfrsltlvnwngffartfdldelvttlsggngagksttmaafvtalipdlTllhfrntteagatsgsrdkglhgklragvcystldvinsrhqrvvvgvrlqqvagrdrkvdikpfmiqglptaiqptqlltenvgerqarvlplnelkdrldemegvqfkqfnsitdyhaqmfdlgvipkrlrsasdrskfyrlieaslyggissaitrslrdyllpensgvrkafqdmeaalrenritleairvtqsdrdlfkhliteatsyvsadymrhanerrthldealalrgelfgshkqlateqyrhvemarelaeqsgassdletdhqaasdhlnlvqtamrqqekidryqvdleelsyrleeqtdvveeagelqaeyearteateqevdelksqladyqqaldvqqtraiqyqqalqalerarelcrlpdlsvdnaeewletfqakeqqateallaleqklsvadaahnqfeqayqlvknivgetsrseawqsarellrdwpsqrhladrvqplrmrlseleqrlnnqqnaerllsefckrqgrqyqaedlealqnelearqealslsvneggerrmemrqeleqlkqkiqsltarapvwlaaqdtlnqlceqsgetlassndvteymqqllerereatverdevaaqkrelekqierlsqpsgaedsrmialaerfggvllseiydditiddapyfsalygparhgivvpdlslvrphletledcpedlyliegdpqsfddsvfnaeeqtnavlvkssdrqwrysrypelplfgraarenrlealnlerdalaeryatlsfdvqkiqrahqafsqfvgkhlsvafdtdpeaeirelrqrhtelerevsrfedqtqqqrqqyaqakeslttlnrlipqvtllldetlidrveevreemdeaqeaarflqqhgsaltklepmvavlqsdpqqheqlqqdyetakhsqhqakqqafalveivqrrvhfsysdsagmlsenadlndklrqrlehaesdrsrareqlrqqqaqysqfnqvlaslkssyetkqdmlkellqemkdigvqadanaemrarerrdrlhealsvnrsrvnqlekqiafceaemenvqkklrklerdyyqireqvvsakagwcavmrmvkdngverrlhrrelaymeggalrsmsdkalgalrlavadnehlrdalrlsedpkrperkvqffiavyqhlrerirqdiirtddpvdaieqmeielarlteeltareqklaissksvaniirktiqreqnrirmlnqglqavsfgqvrgvrlnvnvreshailldvlseqqeqhqdlfnsqrltfseamaklyqrlnpqvdmgqrlpqtigeelldyrnyleldvevnrgsdgwlkaesgalstgeaigtgmsilvmvvqsweeesrrlrgkdispcrllfldqaarldaksiatlfelcerlqmqliiaapenispekgttyklvrkvfknhehvhvvglrgfg/iergkfrsltlvnwngffartfdldelvttlsggngagksttmaafvtalipdltllhfrntteagatsgsrdkglhgklragvcystldvinsrhqrvvvgvrlqqvagrdrkvdikpfmiqglptaiqptqlltenvgerqarvlplnelkdrldemegvqfkqfnsitdyhaqmfdlgvipkrlrsasdrskfyrlieaslyggissaitrslrdyllpensgvrkafqdmeaalrenritleairvtqsdrdlfkhliteatsyvsadymrhanerrthldealalrgelfgshkqlateqyrhvemarelaeqsgassdletdhqaasdhlnlvqtamrqqekidryqvdleelsyrleeqtdvveeagelqaeyearteateqevdelksqladyqqaldvqqtraiqyqqalqalerarelcrlpdlsvdnaeewletfqakeqqateallaleqklsvadaahnqfeqayqlvknivgetsrseawqsarellrdwpsqrhladrvqplrmrlseleqrlnnqqnaerllsefckrqgrqyqaedlealqnelearqealslsvneggerrmemrqeleqlkqkiqsltarapvwlaaqdtlnqlceqsgetlassndvteymqqllerereatverdevaaqkrelekqierlsqpsgaedsrmialaerfggvllseiydditiddapyfsalygparhgivvpdlslvrphletledcpedlyliegdpqsfddsvfnaeeqtnavlvkssdrqwrysrypelplfgraarenrlealnlerdalaeryatlsfdvqkiqrahqafsqfvgkhlsvafdtdpeaeirelrqrhtelerevsrfedqtqqqrqqyaqakeslttlnrlipqvtllldetlidrveevreemdeaqeaarflqqhgsaltklepmvavlqsdpqqheqlqqdyetakhsqhqakqqafalveivqrrvhfsysdsagmlsenadlndklrqrlehaesdrsrareqlrqqqaqysqfnqvlaslkssyetkqdmlkellqemkdigvqadanaemrarerrdrlhealsvnrsrvnqlekqiafceaemenvqkklrklerdyyqireqvvsakagwcavmrmvkdngverrlhrrelaymeggalrsmsdkalgalrlavadnehlrdalrlsedpkrperkvqffiavyqhlrerirqdiirtddpvdaieqmeielarlteeltareqklaissksvaniirktiqreqnrirmlnqglqavsfgqvrgvrlnvnvreshailldvlseqqeqhqdlfnsqrltfseamaklyqrlnpqvdmgQrlpqtigeelldyrnyleldvevnrgsdgwlkaesgalstgeaigtgmsilvmvvqsweeesrrlrgkdispcrllfldqaarldaksiatlfelcerlqmqliiaapenispekgttyklvrkvfknhehvhvvglrgfg/fmpvklaqalanslfpeldsqlragrhigiddldnhaflmdfqeqleefyarynvelirapegffylrprSTtliprsvlseldmmvgkilcylylsperlanqgiftsqelyeelisladegklmkfvnqrssgsdldkqklqekvrttlnrlrrlgmvyflpnnnnkftiteavfrfgadvrsgddpreiqlrmir >7nyz_IJ:P-loop_containing_nucleoside_triphosphate_hydrolases;MukF_C-terminal_domain-like; title=CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA MONOMER (PARTIALLY OPEN CONFORMATION) organism=PHOTORHABDUS THRACENSIS DNA sequence DT(L1):DA(K80) DG(L2):DC(K79) DC(L3):DG(K78) DC(L4):DG(K77) DG(L5):DC(K76) DT(L6):DA(K75) DT(L7):DA(K74) DA(L8):DT(K73) DC(L9):DG(K72) DA(L10):DT(K71) DA(L11):DT(K70) DT(L12):DA(K69) DG(L13):DC(K68) DT(L14):DA(K67) DA(L15):DT(K66) DA(L16):DT(K65) DC(L17):DG(K64) DA(L18):DT(K63) DG(L19):DC(K62) DT(L20):DA(K61) DG(L21):DC(K60) DG(L22):DC(K59) chainI ( 72) GLN72 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG75 0 0 0 18 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA76 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LYS79 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 5 10 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 chainJ ( 72) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 75) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 14 0 0 0 0 ( 76) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 79) LYS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 0 0 0 0 17 14 3 0 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkyqqlenlecgwkwaylirkhqegepitkyiensaahaavdkliklesepvrvlewieqhmnpdlfnrmkQTiRArrKRhfnaehqhtrkkSiDldfpvwhrlsalsqrrgntlsetivqliedaerkekyan/mkyqqlenlecgwkwaylirkhqegepitkyiensaahaavdkliklesepvrvlewieqhmnpdlfnrmkQTiRArrKRhfnaehqhtrkkSidldfpvwhrlsalsqrrgntlsetivqliedaerkekyanq >7nz0_ABF:P-loop_containing_nucleoside_triphosphate_hydrolases;MukF_C-terminal_domain-like; title=CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA MONOMER (OPEN CONFORMATION) organism=PHOTORHABDUS THRACENSIS DNA sequence DA(M1):DT(N32) DT(M2):DA(N31) DA(M3):DT(N30) DT(M4):DA(N29) DA(M5):DT(N28) DT(M6):DA(N27) DA(M7):DT(N26) DT(M8):DA(N25) DA(M9):DT(N24) DT(M10):DA(N23) DA(M11):DT(N22) DT(M12):DA(N21) DA(M13):DT(N20) DT(M14):DA(N19) DA(M15):DT(N18) DT(M16):DA(N17) DA(M17):DT(N16) DT(M18):DA(N15) DA(M19):DT(N14) DT(M20):DA(N13) DA(M21):DT(N12) DT(M22):DA(N11) DA(M23):DT(N10) DT(M24):DA(N9) DA(M25):DT(N8) DT(M26):DA(N7) DA(M27):DT(N6) DT(M28):DA(N5) DA(M29):DT(N4) DT(M30):DA(N3) chainA chainB (1326) GLN1327 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 71) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 72) THR80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence iergkfrsltlvnwngffartfdldelvttlsggngagksttmaafvtalipdltllhfrntteagatsgsrdkglhgklragvcystldvinsrhqrvvvgvrlqqvagrdrkvdikpfmiqglptaiqptqlltenvgerqarvlplnelkdrldemegvqfkqfnsitdyhaqmfdlgvipkrlrsasdrskfyrlieaslyggissaitrslrdyllpensgvrkafqdmeaalrenritleairvtqsdrdlfkhliteatsyvsadymrhanerrthldealalrgelfgshkqlateqyrhvemarelaeqsgassdletdhqaasdhlnlvqtamrqqekidryqvdleelsyrleeqtdvveeagelqaeyearteateqevdelksqladyqqaldvqqtraiqyqqalqalerarelcrlpdlsvdnaeewletfqakeqqateallaleqklsvadaahnqfeqayqlvknivgetsrseawqsarellrdwpsqrhladrvqplrmrlseleqrlnnqqnaerllsefckrqgrqyqaedlealqnelearqealslsvneggerrmemrqeleqlkqkiqsltarapvwlaaqdtlnqlceqsgetlassndvteymqqllerereatverdevaaqkrelekqierlsqpsgaedsrmialaerfggvllseiydditiddapyfsalygparhgivvpdlslvrphletledcpedlyliegdpqsfddsvfnaeeqtnavlvkssdrqwrysrypelplfgraarenrlealnlerdalaeryatlsfdvqkiqrahqafsqfvgkhlsvafdtdpeaeirelrqrhtelerevsrfedqtqqqrqqyaqakeslttlnrlipqvtllldetlidrveevreemdeaqeaarflqqhgsaltklepmvavlqsdpqqheqlqqdyetakhsqhqakqqafalveivqrrvhfsysdsagmlsenadlndklrqrlehaesdrsrareqlrqqqaqysqfnqvlaslkssyetkqdmlkellqemkdigvqadanaemrarerrdrlhealsvnrsrvnqlekqiafceaemenvqkklrklerdyyqireqvvsakagwcavmrmvkdngverrlhrrelaymeggalrsmsdkalgalrlavadnehlrdalrlsedpkrperkvqffiavyqhlrerirqdiirtddpvdaieqmeielarlteeltareqklaissksvaniirktiqreqnrirmlnqglqavsfgqvrgvrlnvnvreshailldvlseqqeqhqdlfnsqrltfseamaklyqrlnpqvdmgqrlpqtigeelldyrnyleldvevnrgsdgwlkaesgalstgeaigtgmsilvmvvqsweeesrrlrgkdispcrllfldqaarldaksiatlfelcerlqmqliiaapenispekgttyklvrkvfknhehvhvvglrgfg/iergkfrsltlvnwngffartfdldelvttlsggngagksttmaafvtalipdltllhfrntteagatsgsrdkglhgklragvcystldvinsrhqrvvvgvrlqqvagrdrkvdikpfmiqglptaiqptqlltenvgerqarvlplnelkdrldemegvqfkqfnsitdyhaqmfdlgvipkrlrsasdrskfyrlieaslyggissaitrslrdyllpensgvrkafqdmeaalrenritleairvtqsdrdlfkhliteatsyvsadymrhanerrthldealalrgelfgshkqlateqyrhvemarelaeqsgassdletdhqaasdhlnlvqtamrqqekidryqvdleelsyrleeqtdvveeagelqaeyearteateqevdelksqladyqqaldvqqtraiqyqqalqalerarelcrlpdlsvdnaeewletfqakeqqateallaleqklsvadaahnqfeqayqlvknivgetsrseawqsarellrdwpsqrhladrvqplrmrlseleqrlnnqqnaerllsefckrqgrqyqaedlealqnelearqealslsvneggerrmemrqeleqlkqkiqsltarapvwlaaqdtlnqlceqsgetlassndvteymqqllerereatverdevaaqkrelekqierlsqpsgaedsrmialaerfggvllseiydditiddapyfsalygparhgivvpdlslvrphletledcpedlyliegdpqsfddsvfnaeeqtnavlvkssdrqwrysrypelplfgraarenrlealnlerdalaeryatlsfdvqkiqrahqafsqfvgkhlsvafdtdpeaeirelrqrhtelerevsrfedqtqqqrqqyaqakeslttlnrlipqvtllldetlidrveevreemdeaqeaarflqqhgsaltklepmvavlqsdpqqheqlqqdyetakhsqhqakqqafalveivqrrvhfsysdsagmlsenadlndklrqrlehaesdrsrareqlrqqqaqysqfnqvlaslkssyetkqdmlkellqemkdigvqadanaemrarerrdrlhealsvnrsrvnqlekqiafceaemenvqkklrklerdyyqireqvvsakagwcavmrmvkdngverrlhrrelaymeggalrsmsdkalgalrlavadnehlrdalrlsedpkrperkvqffiavyqhlrerirqdiirtddpvdaieqmeielarlteeltareqklaissksvaniirktiqreqnrirmlnqglqavsfgqvrgvrlnvnvreshailldvlseqqeqhqdlfnsqrltfseamaklyqrlnpqvdmgQrlpqtigeelldyrnyleldvevnrgsdgwlkaesgalstgeaigtgmsilvmvvqsweeesrrlrgkdispcrllfldqaarldaksiatlfelcerlqmqliiaapenispekgttyklvrkvfknhehvhvvglrgfg/fmpvklaqalanslfpeldsqlragrhigiddldnhaflmdfqeqleefyarynvelirapegffylrprSTtliprsvlseldmmvgkilcylylsperlanqgiftsqelyeelisladegklmkfvnqrssgsdldkqklqekvrttlnrlrrlgmvyflpnnnnkftiteavfrfgadvrsgddpreiqlrmir >7nz0_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA MONOMER (OPEN CONFORMATION) organism=PHOTORHABDUS THRACENSIS DNA sequence DA(N3):DT(M30) DT(N4):DA(M29) DA(N5):DT(M28) DT(N6):DA(M27) DA(N7):DT(M26) DT(N8):DA(M25) DA(N9):DT(M24) DT(N10):DA(M23) DA(N11):DT(M22) DT(N12):DA(M21) DA(N13):DT(M20) DT(N14):DA(M19) DA(N15):DT(M18) DT(N16):DA(M17) DA(N17):DT(M16) DT(N18):DA(M15) DA(N19):DT(M14) DT(N20):DA(M13) DA(N21):DT(M12) DT(N22):DA(M11) DA(N23):DT(M10) DT(N24):DA(M9) DA(N25):DT(M8) DT(N26):DA(M7) DA(N27):DT(M6) DT(N28):DA(M5) DA(N29):DT(M4) DT(N30):DA(M3) DA(N31):DT(M2) DT(N32):DA(M1) chainB (1326) GLN1327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence iergkfrsltlvnwngffartfdldelvttlsggngagksttmaafvtalipdltllhfrntteagatsgsrdkglhgklragvcystldvinsrhqrvvvgvrlqqvagrdrkvdikpfmiqglptaiqptqlltenvgerqarvlplnelkdrldemegvqfkqfnsitdyhaqmfdlgvipkrlrsasdrskfyrlieaslyggissaitrslrdyllpensgvrkafqdmeaalrenritleairvtqsdrdlfkhliteatsyvsadymrhanerrthldealalrgelfgshkqlateqyrhvemarelaeqsgassdletdhqaasdhlnlvqtamrqqekidryqvdleelsyrleeqtdvveeagelqaeyearteateqevdelksqladyqqaldvqqtraiqyqqalqalerarelcrlpdlsvdnaeewletfqakeqqateallaleqklsvadaahnqfeqayqlvknivgetsrseawqsarellrdwpsqrhladrvqplrmrlseleqrlnnqqnaerllsefckrqgrqyqaedlealqnelearqealslsvneggerrmemrqeleqlkqkiqsltarapvwlaaqdtlnqlceqsgetlassndvteymqqllerereatverdevaaqkrelekqierlsqpsgaedsrmialaerfggvllseiydditiddapyfsalygparhgivvpdlslvrphletledcpedlyliegdpqsfddsvfnaeeqtnavlvkssdrqwrysrypelplfgraarenrlealnlerdalaeryatlsfdvqkiqrahqafsqfvgkhlsvafdtdpeaeirelrqrhtelerevsrfedqtqqqrqqyaqakeslttlnrlipqvtllldetlidrveevreemdeaqeaarflqqhgsaltklepmvavlqsdpqqheqlqqdyetakhsqhqakqqafalveivqrrvhfsysdsagmlsenadlndklrqrlehaesdrsrareqlrqqqaqysqfnqvlaslkssyetkqdmlkellqemkdigvqadanaemrarerrdrlhealsvnrsrvnqlekqiafceaemenvqkklrklerdyyqireqvvsakagwcavmrmvkdngverrlhrrelaymeggalrsmsdkalgalrlavadnehlrdalrlsedpkrperkvqffiavyqhlrerirqdiirtddpvdaieqmeielarlteeltareqklaissksvaniirktiqreqnrirmlnqglqavsfgqvrgvrlnvnvreshailldvlseqqeqhqdlfnsqrltfseamaklyqrlnpqvdmgQrlpqtigeelldyrnyleldvevnrgsdgwlkaesgalstgeaigtgmsilvmvvqsweeesrrlrgkdispcrllfldqaarldaksiatlfelcerlqmqliiaapenispekgttyklvrkvfknhehvhvvglrgfg >7nz0_IJ:P-loop_containing_nucleoside_triphosphate_hydrolases;MukF_C-terminal_domain-like; title=CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA MONOMER (OPEN CONFORMATION) organism=PHOTORHABDUS THRACENSIS DNA sequence DT(L1):DA(K80) DG(L2):DC(K79) DC(L3):DG(K78) DC(L4):DG(K77) DG(L5):DC(K76) DT(L6):DA(K75) DT(L7):DA(K74) DA(L8):DT(K73) DC(L9):DG(K72) DA(L10):DT(K71) DA(L11):DT(K70) DT(L12):DA(K69) DG(L13):DC(K68) DT(L14):DA(K67) DA(L15):DT(K66) DA(L16):DT(K65) DC(L17):DG(K64) DA(L18):DT(K63) DG(L19):DC(K62) DT(L20):DA(K61) DG(L21):DC(K60) DG(L22):DC(K59) chainI ( 72) GLN72 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG75 0 0 0 23 16 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ALA76 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LYS79 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 4 13 19 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 ( 95) ASP95 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 chainJ ( 72) GLN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 ( 73) THR73 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 75) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 19 18 0 0 0 0 ( 76) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 79) LYS79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 ( 80) ARG80 0 0 0 0 0 0 0 0 0 0 0 19 16 4 0 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkyqqlenlecgwkwaylirkhqegepitkyiensaahaavdkliklesepvrvlewieqhmnpdlfnrmkQTiRArrKRhfnaehqhtrkkSiDldfpvwhrlsalsqrrgntlsetivqliedaerkekyan/mkyqqlenlecgwkwaylirkhqegepitkyiensaahaavdkliklesepvrvlewieqhmnpdlfnrmkQTiRArrKRhfnaehqhtrkkSidldfpvwhrlsalsqrrgntlsetivqliedaerkekyanq >7o0g_A:DNA/RNA_polymerases;Ribonuclease_H-like;Acid_proteases; title=STRUCTURE OF THE FOAMY VIRAL PROTEASE-REVERSE TRANSCRIPTASE IN COMPLEX WITH RNA/DNA HYBRID. organism=WHITE-TUFTED-EAR MARMOSET SIMIAN FOAMY VIRUS DNA sequence DC(F1) DC(F2) DT(F3) DC(F4) DT(F5) DC(F6) DC(F7) DT(F8) DG(F9) DG(F10) DA(F11) DC(F12) DA(F13) DA(F14) DG(F15) chainA (206) ARG212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (392) PHE398 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence ppllqlpvevkktelngfwdtgaqitcipeaflkeeipigeaqiktlhtklqsvyylkfkvlgrkveaevttspfdyviispsdipwykpqpleltvklpvqdfkkelinkaninneekkqlaklldkydvlwqqwenqvghrkipphniatgtvaprpqrqyhintkakpsiqqviddllkqgvlikqtsvmntpiypvpkpdwRmvldyravnktvpligaqnqhslgiltnlvrqkykstidlsngfwahpitkdsqwitaftwegkqhvwtrlpqgflnspalftadvvdllknipgisvyvddiyfstetvsehlkilekvfkilleagyivslkksallryevtflgfsitqtgrgltsefkdkiqnitsprtlkelqsilglfnFarnfvpnfseiikplyslistaegnnikwtsehtryleeivsalnhagnleqrdnesplvvklnaspktgyiryynkggqkpiayashvftntelkftplekllvtmhkalikaidlalgqpievyspiismqklqktplperkalstrwitwlsyledpritfyydktlpdlknvpetvtdkkpkmlpiieyaavfytngsairspnkshssgmgivhavfeltiehqwsiplgdhtaqyaeisavefackkannisgpvlivtnsdyvarsvneelpfwrsngfvnnkkkplkhiskwknisdslllkrdiiivheptsihtqgnnladklatqgsytv >7o0h_A:DNA/RNA_polymerases;Acid_proteases; title=STRUCTURE OF THE FOAMY VIRAL PROTEASE-REVERSE TRANSCRIPTASE DRH IN COMPLEX WITH DS DNA. organism=WHITE-TUFTED-EAR MARMOSET SIMIAN FOAMY VIRUS DNA sequence DG(F1):DC(E15) DT(F2):DA(E14) DG(F3):DC(E13) DT(F4):DA(E12) DC(F5):DG(E11) DG(F6):DC(E10) DC(F7):DG(E9) DA(F8):DT(E8) DC(F9):DG(E7) DT(F10):DA(E6) DC(F11):DG(E5) DT(F12):DA(E4) DG(F13):DC(E3) chainA (227) GLN232 0 0 0 0 0 0 0 0 0 0 1 5 0 (229) SER234 0 0 0 0 0 0 0 0 0 0 4 0 0 (286) PRO291 0 0 0 0 0 0 0 0 0 0 0 0 2 (306) TYR311 0 0 0 0 0 0 0 0 0 0 4 6 1 (392) ASN397 0 0 0 0 0 0 0 1 3 0 0 0 0 prot.sequence pllqlpvevkktelngfwdtgaqitcipeaflkeeipigeaqiktlhtklqsvyylkfkvlgrkveaevttspfdyviispsdipwykpqpleltvklpvqdfkkelinkaninneekkqlaklldkydvlwqqwenqvghrkipphniatgtvaprpqrqyhintkakpsiqqviddllkqgvlikqtsvmntpiypvpkpdgkwrmvldyravnktvpligaqnQhSlgiltnlvrqkykstidlsngfwahpitkdsqwitaftwegkqhvwtrlpqgflnsPalftadvvdllknipgisvYvddiyfstetvsehlkilekvfkilleagyivslkksallryevtflgfsitqtgrgltsefkdkiqnitsprtlkelqsilglfNfarnfvpnfseiikplyslistaegnnikwtsehtryleeivsalnhagnleqrdnesplvvklnaspktgyiryynkggqkpiayashvftntelkftplekllvtmhkalikaidlalgqpievyspiismqklqktplperkalstrwitwlsyledpritfyydktlpdl >7o0h_AB:DNA/RNA_polymerases;Acid_proteases; title=STRUCTURE OF THE FOAMY VIRAL PROTEASE-REVERSE TRANSCRIPTASE DRH IN COMPLEX WITH DS DNA. organism=WHITE-TUFTED-EAR MARMOSET SIMIAN FOAMY VIRUS DNA sequence DG(F1):DC(E15) DT(F2):DA(E14) DG(F3):DC(E13) DT(F4):DA(E12) DC(F5):DG(E11) DG(F6):DC(E10) DC(F7):DG(E9) DA(F8):DT(E8) DC(F9):DG(E7) DT(F10):DA(E6) DC(F11):DG(E5) DT(F12):DA(E4) DG(F13):DC(E3) chainA (227) GLN232 0 0 0 0 0 0 0 0 0 0 1 5 0 (229) SER234 0 0 0 0 0 0 0 0 0 0 4 0 0 (286) PRO291 0 0 0 0 0 0 0 0 0 0 0 0 2 (306) TYR311 0 0 0 0 0 0 0 0 0 0 4 6 1 (392) ASN397 0 0 0 0 0 0 0 1 3 0 0 0 0 chainB prot.sequence pllqlpvevkktelngfwdtgaqitcipeaflkeeipigeaqiktlhtklqsvyylkfkvlgrkveaevttspfdyviispsdipwykpqpleltvklpvqdfkkelinkaninneekkqlaklldkydvlwqqwenqvghrkipphniatgtvaprpqrqyhintkakpsiqqviddllkqgvlikqtsvmntpiypvpkpdgkwrmvldyravnktvpligaqnQhSlgiltnlvrqkykstidlsngfwahpitkdsqwitaftwegkqhvwtrlpqgflnsPalftadvvdllknipgisvYvddiyfstetvsehlkilekvfkilleagyivslkksallryevtflgfsitqtgrgltsefkdkiqnitsprtlkelqsilglfNfarnfvpnfseiikplyslistaegnnikwtsehtryleeivsalnhagnleqrdnesplvvklnaspktgyiryynkggqkpiayashvftntelkftplekllvtmhkalikaidlalgqpievyspiismqklqktplperkalstrwitwlsyledpritfyydktlpdl/tppllqlpvevkktelngfwdtgaqitcipeaflklkfkvlgrkveevttspfdyviispsdipwykpqpleltvklpvqdfkkelinkaninneekkqlaklldkydvlwqqwenqvghrkipphniatgtvaprpqrqyhintkakpsiqqviddllkqgvlikqtsvmntpiypvpkpdgkwrmvldyravnktvplirqkykstidlsngfwahpitkdsqwItAftwegkqhvwtrlpqgflnspalftadvvdllknipgisvyvddiyfstetvsehlKilekvfkilleagyivslkKsallryevtflgfsitqtqnitsprtlkelqsilglfnfarnfvpnfseiikplyslistaegnnikwtsehtryleeivsalnhAgnleqrdnesplvvklnaspktgyiryynkqkpiayashvftntelkftplekllvtmhkalikaidlalgqpievyspiismqklqktplperkalstrwitwlsyledpritfyydktlpdlknvpetv >7o24_A:DNA/RNA_polymerases; title=STRUCTURE OF THE FOAMY VIRAL PROTEASE-REVERSE TRANSCRIPTASE IN COMPLEX WITH DSDNA. organism=WHITE-TUFTED-EAR MARMOSET SIMIAN FOAMY VIRUS DNA sequence DC(E3):DG(F22) DA(E4):DT(F21) DG(E5):DC(F20) DA(E6):DT(F19) DG(E7):DC(F18) DT(E8):DA(F17) DG(E9):DC(F16) DC(E10):DG(F15) DG(E11):DC(F14) DA(E12):DT(F13) DC(E13):DG(F12) DA(E14):DT(F11) DC(E15):DG(F10) DC(E16):DG(F9) DT(E17):DA(F8) DG(E18):DC(F7) DA(E19):DT(F6) DT(E20):DA(F5) DT(E21):DA(F4) DC(E22):DG(F3) DC(E23):DG(F2) DA(E24):DT(F1) chainA (196) PRO291 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) TYR311 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pleltvklpvqdfkkelinkaninneekkqlaklldkydvlwqqwenqvghrkipphniatgtvaprpqrqyhintkakpsiqqviddllkqgvlikqtsvmntpiypvpkpdgkwrmvldyravnktvpligaqnqhslgiltnlvrqkykstidlsngfwahpitkdsqwitaftwegkqhvwtrlpqgflnsPalftadvvdllknipgisvYvddiyfstetvsehlkilekvfkilleagyivslkksallryevtflgfsitqtgrgltsefkdkiqnitsprtlkelqsilglfnfarnfvpnfseiikplyslistaegnnikwtsehtryleeivsalnhagnleqrdnesplvvklnaspktgyiryynkggqkpiayashvftntelkftplekllvtmhkalikaidlalgqpievyspiismqklqktplperkalstrwitwlsyledpritfyydktlpdl >7o24_AB:DNA/RNA_polymerases;Ribonuclease_H-like;Acid_proteases; title=STRUCTURE OF THE FOAMY VIRAL PROTEASE-REVERSE TRANSCRIPTASE IN COMPLEX WITH DSDNA. organism=WHITE-TUFTED-EAR MARMOSET SIMIAN FOAMY VIRUS DNA sequence DC(E3):DG(F22) DA(E4):DT(F21) DG(E5):DC(F20) DA(E6):DT(F19) DG(E7):DC(F18) DT(E8):DA(F17) DG(E9):DC(F16) DC(E10):DG(F15) DG(E11):DC(F14) DA(E12):DT(F13) DC(E13):DG(F12) DA(E14):DT(F11) DC(E15):DG(F10) DC(E16):DG(F9) DT(E17):DA(F8) DG(E18):DC(F7) DA(E19):DT(F6) DT(E20):DA(F5) DT(E21):DA(F4) DC(E22):DG(F3) DC(E23):DG(F2) DA(E24):DT(F1) chainA (196) PRO291 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) TYR311 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence pleltvklpvqdfkkelinkaninneekkqlaklldkydvlwqqwenqvghrkipphniatgtvaprpqrqyhintkakpsiqqviddllkqgvlikqtsvmntpiypvpkpdgkwrmvldyravnktvpligaqnqhslgiltnlvrqkykstidlsngfwahpitkdsqwitaftwegkqhvwtrlpqgflnsPalftadvvdllknipgisvYvddiyfstetvsehlkilekvfkilleagyivslkksallryevtflgfsitqtgrgltsefkdkiqnitsprtlkelqsilglfnfarnfvpnfseiikplyslistaegnnikwtsehtryleeivsalnhagnleqrdnesplvvklnaspktgyiryynkggqkpiayashvftntelkftplekllvtmhkalikaidlalgqpievyspiismqklqktplperkalstrwitwlsyledpritfyydktlpdl/leltvklpvqdfkkelinkaninneekkqlaklldkydvlwqqwenqvghrkipphniatgtvaprpqrqyhintkakpsiqqviddllkqgvlikqtsvmntpiypvpkpdgkwrmvldyravnktvplirqkykstidlsngfwahpitkdsqwitaftwegkqhvwtrlpqgflnspalftadvvdllknipGisvyvddiyfstetvsehlKilekvfkilleagyivslkksallryevtflgfsitqtsefkdkqnitsprtlkelqsilglfnfarnfvpnfseiikplyslistaegnnikwtsehtryleeivsalnhagnleqrdnesplvvklnaspktgyiryynkggqkpiayashvftntelkftplekllvtmhkalikaidlaqpievyspiismqklqktplperkalstrwitwlsyledpritfyydktlpdlknvpetv >7o4i_Q:Rap30/74_interaction_domains; title=YEAST RNA POLYMERASE II TRANSCRIPTION PRE-INITIATION COMPLEX WITH INITIAL TRANSCRIPTION BUBBLE organism=? DNA sequence DT(T30):DA(N77) DT(T31):DA(N76) DA(T32):DT(N75) DT(T33):DA(N74) DG(T34):DC(N73) DT(T35):DA(N72) DA(T36):DT(N71) DT(T37):DA(N70) DG(T38):DC(N69) DT(T39):DA(N68) DA(T40):DT(N67) DC(T41):DG(N66) DA(T42):DT(N65) DA(T43):DT(N64) DC(T44):DG(N63) DA(T45):DT(N62) DC(T46):DG(N61) DA(T47):DT(N60) DC(T48):DG(N59) DA(T49):DT(N58) DT(T50):DA(N57) DC(T51):DG(N56) DG(T52):DC(N55) DG(T53):DC(N54) DA(T54):DT(N53) DG(T55):DC(N52) DG(T56):DC(N51) DT(T57):DA(N50) DG(T58):DC(N49) DA(T59):DT(N48) DA(T60):DT(N47) DT(T61):DA(N46) DC(T62):DG(N45) DG(T63):DC(N44) DA(T64):DT(N43) DA(T65):DT(N42) DC(T66):DG(N41) DG(T67):DC(N40) DT(T68):DA(N39) DT(T69):DA(N38) DC(T70):DG(N37) DC(T71):DG(N36) DA(T72):DT(N35) DT(T73):DA(N34) DA(T74):DT(N33) DG(T75):DC(N32) DC(T76):DG(N31) DT(T77):DA(N30) DA(T78):DT(N29) DT(T79):DA(N28) DT(T80):DA(N27) DA(T81):DT(N26) DT(T82):DA(N25) DA(T83):DT(N24) DT(T84):DA(N23) DA(T85):DT(N22) DC(T86):DG(N21) DA(T87):DT(N20) DC(T88):DG(N19) DA(T89):DT(N18) DG(T90):DC(N17) DC(T91):DG(N16) DG(T92):DC(N15) DT(T93):DA(N14) DG(T94):DC(N13) DC(T95):DG(N12) DT(T96):DA(N11) chainQ (185) LYS415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence naspfikrdrmrrnflrmrdpneynefplraipkedlenmrthllkfqskkkinpvtdfhlpvrlhrkdtrnlqfqltraeivqrqkeiseykklrrktrqlkvldenakklrfeefypwvmedfdgyntwvgsyeagnsdsyvllsveddgsftmipadkvykftarnkyatltideaekrmdKksgevprwlmkhldnigttttrydrtrrklkavadq >7o4i_W:Zinc_beta-ribbon; title=YEAST RNA POLYMERASE II TRANSCRIPTION PRE-INITIATION COMPLEX WITH INITIAL TRANSCRIPTION BUBBLE organism=? DNA sequence DT(T30):DA(N77) DT(T31):DA(N76) DA(T32):DT(N75) DT(T33):DA(N74) DG(T34):DC(N73) DT(T35):DA(N72) DA(T36):DT(N71) DT(T37):DA(N70) DG(T38):DC(N69) DT(T39):DA(N68) DA(T40):DT(N67) DC(T41):DG(N66) DA(T42):DT(N65) DA(T43):DT(N64) DC(T44):DG(N63) DA(T45):DT(N62) DC(T46):DG(N61) DA(T47):DT(N60) DC(T48):DG(N59) DA(T49):DT(N58) DT(T50):DA(N57) DC(T51):DG(N56) DG(T52):DC(N55) DG(T53):DC(N54) DA(T54):DT(N53) DG(T55):DC(N52) DG(T56):DC(N51) DT(T57):DA(N50) DG(T58):DC(N49) DA(T59):DT(N48) DA(T60):DT(N47) DT(T61):DA(N46) DC(T62):DG(N45) DG(T63):DC(N44) DA(T64):DT(N43) DA(T65):DT(N42) DC(T66):DG(N41) DG(T67):DC(N40) DT(T68):DA(N39) DT(T69):DA(N38) DC(T70):DG(N37) DC(T71):DG(N36) DA(T72):DT(N35) DT(T73):DA(N34) DA(T74):DT(N33) DG(T75):DC(N32) DC(T76):DG(N31) DT(T77):DA(N30) DA(T78):DT(N29) DT(T79):DA(N28) DT(T80):DA(N27) DA(T81):DT(N26) DT(T82):DA(N25) DA(T83):DT(N24) DT(T84):DA(N23) DA(T85):DT(N22) DC(T86):DG(N21) DA(T87):DT(N20) DC(T88):DG(N19) DA(T89):DT(N18) DG(T90):DC(N17) DC(T91):DG(N16) DG(T92):DC(N15) DT(T93):DA(N14) DG(T94):DC(N13) DC(T95):DG(N12) DT(T96):DA(N11) chainW ( 79) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence drpiddivknllkfvvrgfyggsfvlvldailfhsvlaeddlkqllsinktelgpliarlrsdrlisihkqreyppnsKsvervyyyvkyphaidaikwkvhqvvqrlkddldknsepngymcpicltkytqleavqllnfdrteflcslcdeplveddsgkknkekqdklnrlmdqiqpiidslkkiddsrieentfeialarlippqnqshaaytynpkkgstmfrpgdsapatlhinittasdevaqrelqerqaeekrkqnavpewhkqstigktalgreerenektlndyyaalakkqaledefedv >7o4j_7MOQRUWX:Cyclin-like;Zinc_beta-ribbon;TATA-box_binding_protein-like;Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain;Transcription_factor_IIA_TFIIA,_beta-barrel_domain;Transcription_factor_IIA_TFIIA,_alpha-helical_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=YEAST RNA POLYMERASE II TRANSCRIPTION PRE-INITIATION COMPLEX (CONSENSUS) organism=? DNA sequence DA(N11):DT(T96) DG(N12):DC(T95) DC(N13):DG(T94) DA(N14):DT(T93) DC(N15):DG(T92) DG(N16):DC(T91) DC(N17):DG(T90) DT(N18):DA(T89) DG(N19):DC(T88) DT(N20):DA(T87) DG(N21):DC(T86) DT(N22):DA(T85) DA(N23):DT(T84) DT(N24):DA(T83) DA(N25):DT(T82) DT(N26):DA(T81) DA(N27):DT(T80) DA(N28):DT(T79) DT(N29):DA(T78) DA(N30):DT(T77) DG(N31):DC(T76) DC(N32):DG(T75) DT(N33):DA(T74) DA(N34):DT(T73) DT(N35):DA(T72) DG(N36):DC(T71) DG(N37):DC(T70) DA(N38):DT(T69) DA(N39):DT(T68) DC(N40):DG(T67) DG(N41):DC(T66) DT(N42):DA(T65) DT(N43):DA(T64) DC(N44):DG(T63) DG(N45):DC(T62) DG(N63):DC(T44) DT(N64):DA(T43) DT(N65):DA(T42) DG(N66):DC(T41) DT(N67):DA(T40) DA(N68):DT(T39) DC(N69):DG(T38) DA(N70):DT(T37) DT(N71):DA(T36) DA(N72):DT(T35) chain7 (496) LYS656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (516) HIS676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 chainM chainO ( 10) ASN69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) VAL71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) PHE99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASN159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) VAL161 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PHE190 0 0 0 0 0 0 0 0 0 0 0 9 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) PRO191 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) LEU205 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) PHE207 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) VAL213 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) THR215 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR (200) LYS290 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) GLU326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU chainW ( 79) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 0 0 0 0 0 0 0 0 0 0 0 chainX prot.sequence padfvpdsvsgmfrshdfsylrlrpdhasrplwispsdgriilesfsplaeqaqdflvtiaepisrpshiheykitayslyaavsvgletddiisvldrlskvpvaesiinfikgatisygkvklvikhnryfvettqadilqmllndsvigvhsfeianesvevvkkrcqeidypvleeydfrndhrnpdldidlkpstqirpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflqwctlqpencavftsdnkemfqtesglvvstysmvantrnrshdsqkvmdfltgrewgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeanwmelsqkghianvqcaevwcpmtaefyqeylretarkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpqqermnilqnfqyndqintiflsKvgdtsidlpeatcliqissHygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmenipnlayasprerrellqevllknhplirkmy/rgpnlnivltcpeckvyppkiverfsegdvvcalcglvlsdklvdrvgeasnplldgnnlstrigkgettdmrftkelnkaqgknvmdkkdnevqaafakitmlcdaaelpkivkdcakeayklchdektlkgksmesimaasiligcrraevartfkeiqslihvktkefgktlnimknilrgksedgkidtdnmsgaqnltyiprfcshlglpmqvttsaeytakkckeikeiagkspitiavvsiylnillfqipitaakvgqtlqvtegtiksgykilyehrdklvdpqliangvvsldnlpgv/tsgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVlTgakqreeiyqafeaiypvlsefrkm/naspfikrdRmRrnflrmrdpneynefplraipkedlenMrthllkfqskkkinPvTdfhlpVrLhrkdtrnlqfqltraeivqrqkeiseykklrrktRqLkvldenakklrfeefypwvmedfdgyntWVgsyeagnsdsyvlLsVeddgsFtMipadkvykftarnkyatltideaekrmdkksgevprwlmkhldnigttttrydrtrrklkavadq/evfdgndiennetkvyeesldldlersnrqvwlvrlpmflaekwrdrnnlhgqelgkirinkdgskitlllnendndsipheydleltkkvveneyvfteqnlkkyqrdryipyvktipkktaivgtvchecqvmpsmndpnyhkiveqrrnivklnnkerittldetvgvtmshtgmsmrsdnsnflkvgrekaksniKsirmpkkeildylfklfdeydywslkglkertrqpEahlkecldkvatlvkkgpyafkytlrpeykkl/naeasrvyeiivesvvnevredfenagideqtlqdlkniwqkkltetkvttfswdylispdenlmlclydkvtrtkarwkcslkdgvvtinrndytfqkaqveaewv/drpiddivknllkfvvrgfyggsfvlvldailfhsvlaeddlkqllsinktelgpliarlrsdrlisihkqreyppnsKsvervyyyvkyphaidaikwkvhqvvqrlkddldknsepngymcpicltkytqleavqllnfdrteflcslcdeplveddsgkknkekqdklnrlmdqiqpiidslkkiddsrieentfeialarlippqnqshaaytynpkkgstmfrpgdsapatlhinittasdevaqrelqerqaeekrkqnavpewhkqstigktalgreerenektlndyyaalakkqaledefedv/siaaaalqanqtdiskshdsskllwateyiqkkgkpvlvnelldylsmkkddkviellkkldriefdpkkgtfkylstYdvhspsellkllrsqvtfkgisckdlkdgwpqcdetinqleedskilvlrtkkdktpryvwynsggnlkcideefvkmwenvqlpqfaelprklqdlglkpasvdpatikrqkgkitnthmtgilkdyshr >7o4l_7:P-loop_containing_nucleoside_triphosphate_hydrolases; title=YEAST TFIIH IN THE EXPANDED STATE WITHIN THE PRE-INITIATION COMPLEX organism=? DNA sequence DA(T35):DT(N72) DT(T36):DA(N71) DG(T37):DC(N70) DA(T38):DT(N69) DT(T39):DA(N68) DA(T40):DT(N67) DT(T41):DA(N66) DT(T42):DA(N65) DT(T43):DA(N64) DT(T44):DA(N63) chain7 (496) LYS656 0 0 0 1 0 0 0 0 0 0 (516) HIS676 0 0 2 0 0 0 0 0 0 0 prot.sequence padfvpdsvsgmfrshdfsylrlrpdhasrplwispsdgriilesfsplaeqaqdflvtiaepisrpshiheykitayslyaavsvgletddiisvldrlskvpvaesiinfikgatisygkvklvikhnryfvettqadilqmllndsvigvhsfeianesvevvkkrcqeidypvleeydfrndhrnpdldidlkpstqirpyqekslskmfgngrarsgiivlpcgagktlvgitaactikksvivlctssvsvmqwrqqflqwctlqpencavftsdnkemfqtesglvvstysmvantrnrshdsqkvmdfltgrewgfiildevhvvpaamfrrvvstiaahaklgltatlvreddkigdlnfligpklyeanwmelsqkghianvqcaevwcpmtaefyqeylretarkrmllyimnptkfqacqfliqyherrgdkiivfsdnvyalqeyalkmgkpfiygstpqqermnilqnfqyndqintiflsKvgdtsidlpeatcliqissHygsrrqeaqrlgrilrakrrndegfnaffyslvskdtqemyystkrqaflvdqgyafkvithlhgmenipnlayasprerrellqevllkn >7o56_A:"Winged_helix"_DNA-binding_domain; title=X-RAY STRUCTURE OF INTERFERON REGULATORY FACTOR 4 DNA BINDING DOMAIN BOUND TO AN INTERFERON-STIMULATED RESPONSE ELEMENT SOLVED BY PHOSPHORUS AND SULPHUR SAD METHODS organism=Homo sapiens DNA sequence DT(E2):DA(D21) DT(E3):DA(D20) DA(E4):DT(D19) DC(E5):DG(D18) DT(E6):DA(D17) DT(E7):DA(D16) DT(E8):DA(D15) DC(E9):DG(D14) DG(E10):DC(D13) DG(E11):DC(D12) DT(E12):DA(D11) DT(E13):DA(D10) DT(E14):DA(D9) DC(E15):DG(D8) DT(E16):DA(D7) DT(E17):DA(D6) DT(E18):DA(D5) DT(E19):DA(D4) DA(E20):DT(D3) DT(E21):DA(D2) chainA ( 75) THR95 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 78) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 ( 79) CYS99 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 ( 83) LYS103 0 0 0 0 0 0 0 0 1 13 3 0 0 0 0 0 0 0 0 0 prot.sequence ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelversqldisdpykvyrivpegakk >7o56_AB:"Winged_helix"_DNA-binding_domain; title=X-RAY STRUCTURE OF INTERFERON REGULATORY FACTOR 4 DNA BINDING DOMAIN BOUND TO AN INTERFERON-STIMULATED RESPONSE ELEMENT SOLVED BY PHOSPHORUS AND SULPHUR SAD METHODS organism=Homo sapiens DNA sequence DT(E2):DA(D21) DT(E3):DA(D20) DA(E4):DT(D19) DC(E5):DG(D18) DT(E6):DA(D17) DT(E7):DA(D16) DT(E8):DA(D15) DC(E9):DG(D14) DG(E10):DC(D13) DG(E11):DC(D12) DT(E12):DA(D11) DT(E13):DA(D10) DT(E14):DA(D9) DC(E15):DG(D8) DT(E16):DA(D7) DT(E17):DA(D6) DT(E18):DA(D5) DT(E19):DA(D4) DA(E20):DT(D3) DT(E21):DA(D2) chainA ( 75) THR95 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 78) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 ( 79) CYS99 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 ( 83) LYS103 0 0 0 0 0 0 0 0 1 13 3 0 0 0 0 0 0 0 0 0 chainB ( 74) THR95 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG96 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG98 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 ( 78) CYS99 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ALA100 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LYS103 0 0 0 3 5 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelversqldisdpykvyrivpegakk/gklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTRlRCAlnKsndfeelversqldisdpykvyrivpe >7oar_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF HELICASE PIF1 FROM THERMUS OSHIMAI IN COMPLEX WITH PARALLEL G-QUADRUPLEX organism=Thermus oshimai DNA sequence DT(C1) DT(C2) DT(C3) DT(C4) DT(C5) DT(C6) DG(C7) DG(C8) DG(C9) DT(C10) DG(C11) DG(C12) DG(C13) DT(C14) DG(C15) DG(C16) DG(C17) DT(C18) DG(C19) DG(C20) DG(C21) DT(C22) DT(C23) DT(C24) DT(C25) DT(C26) DT(C27) DT(C28) chainA ( 66) HIS131 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ALA138 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) VAL216 0 15 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) PRO218 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) ARG303 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) GLN327 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) ARG355 0 0 0 0 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) PRO358 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (299) ASN364 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ARG392 0 0 0 0 0 7 0 0 0 0 3 0 0 0 9 0 0 0 10 0 0 0 0 0 0 0 0 0 (329) PHE394 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) VAL395 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) TRP396 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (354) ARG419 0 0 0 0 0 0 2 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (367) HIS432 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) PHE451 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eglsseqqraflavtqtphpahlitgpagtgkttllyalqkfykgravtlaptgtaalqargqtvHsffrfpArllryrhpedirppgphsplrkaieqmevlildevgmvrvdlleamdwalrktrkrleepfggvkvlllgdtrqlepVvPggeealyiartwggpfffqahvweevalrvhrlwesqrqredplfaellkrlrqgdpqaletlnraavrpdggeepgtliltprRkeadalnlkrlealpgkpleyqaQvkgefaetdfpteaaltlkkgaqvillRndPlgeyfNgdlgwvedleaealavrlkrngrrvviRpFVWekivytydsereeikpqvvgtfRqvpvrlawaltvHkaqgltldkvhlelgrglFahgqlyvaltrvrrlqdlslsrpiaptellwrpevevfetriqegiwqkshgwpsl >7oar_AB:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCTURE OF HELICASE PIF1 FROM THERMUS OSHIMAI IN COMPLEX WITH PARALLEL G-QUADRUPLEX organism=Thermus oshimai DNA sequence DT(C1) DT(C2) DT(C3) DT(C4) DT(C5) DT(C6) DG(C7) DG(C8) DG(C9) DT(C10) DG(C11) DG(C12) DG(C13) DT(C14) DG(C15) DG(C16) DG(C17) DT(C18) DG(C19) DG(C20) DG(C21) DT(C22) DT(C23) DT(C24) DT(C25) DT(C26) DT(C27) DT(C28) chainA ( 66) HIS131 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ALA138 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) VAL216 0 15 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) PRO218 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) ARG303 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) GLN327 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) ARG355 0 0 0 0 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) PRO358 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (299) ASN364 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ARG392 0 0 0 0 0 7 0 0 0 0 3 0 0 0 9 0 0 0 10 0 0 0 0 0 0 0 0 0 (329) PHE394 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) VAL395 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) TRP396 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (354) ARG419 0 0 0 0 0 0 2 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (367) HIS432 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) PHE451 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 66) HIS131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 73) ALA138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 (151) VAL216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 (153) PRO218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (237) ARG302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (238) ARG303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (344) HIS432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (360) ARG448 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 1 7 3 0 0 0 0 0 (363) PHE451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 4 0 0 0 0 prot.sequence eglsseqqraflavtqtphpahlitgpagtgkttllyalqkfykgravtlaptgtaalqargqtvHsffrfpArllryrhpedirppgphsplrkaieqmevlildevgmvrvdlleamdwalrktrkrleepfggvkvlllgdtrqlepVvPggeealyiartwggpfffqahvweevalrvhrlwesqrqredplfaellkrlrqgdpqaletlnraavrpdggeepgtliltprRkeadalnlkrlealpgkpleyqaQvkgefaetdfpteaaltlkkgaqvillRndPlgeyfNgdlgwvedleaealavrlkrngrrvviRpFVWekivytydsereeikpqvvgtfRqvpvrlawaltvHkaqgltldkvhlelgrglFahgqlyvaltrvrrlqdlslsrpiaptellwrpevevfetriqegiwqkshgwpsl/eglsseqqraflavtqtphpahlitgpagtgkttllyalqkfykgravtlaptgtaalqargqtvHsffrfpArllryrhpedirppgphsplrkaieqmevlildevgmvrvdlleamdwalrktrkrleepfggvkvlllgdtrqlepVvPggeealyiartwggpfffqahvweevalrvhrlwesqrqredplfaellkrlrqgdpqaletlnraavrpdggeepgtliltpRRkeadalnlkrlealpgkpleyqaqvkgefaetdfpteaaltlkkgaqvillrndplgeyfngdlgwvedleaealavrlkrngrrvvirpfvrqvpvrlawaltvHkaqgltldkvhlelgRglFahgqlyvaltrvrrlqdlslsrpiaptellwrpevevfetriqegiwqks >7ob9_AB: title=CRYO-EM STRUCTURE OF HUMAN RNA POLYMERASE I IN ELONGATION STATE organism=HOMO SAPIENS DNA sequence DC(T4):DG(S40) DT(T5):DA(S39) DG(T6):DC(S38) DA(T7):DT(S37) DA(T8):DT(S36) DT(T9):DA(S35) DT(T10):DA(S34) DA(T11):DT(S33) DG(T12):DC(S32) DA(T13):DT(S31) DC(T14):DG(S30) DA(T15):DT(S29) DA(T16):DT(S28) DT(T17):DG(S27) DG(T18):DA(S26) DC(T19):DG(S16) DT(T20):DA(S15) DC(T21):DT(S14) DT(T22):DC(S13) chainA (366) ASP412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (396) ARG442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (507) GLN553 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (508) PRO554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 (936) THR982 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 (937) SER983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (1475) ARG1659 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainB (195) ARG195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (366) PRO366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (367) ASP367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (474) ARG474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (478) PHE478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 (486) VAL486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence sknmpwrrlqgisfgmysaeelkklsvksitnpryldslgnpsanglydlalgpadskevcstcvqdfsncsghlghielpltvynpllfdklylllrgsclnchmltcpravihlllcqlrvlevgalqavyelerilnrfleenpdpsaseireeleqytteivqnnllgsqgahvknvcesksklialfwkahmnakrcphcktgrsvvrkehnskltitfpagyltptsarehlsalwknegfflnylfsgmdddgmesrfnpsvffldflvvppsryrpvsrlgdqmftngqtvnlqavmkdvvlirkllalmaqeqkidrsflstlpgqslidklyniwirlqshvnivfdsemdklmmDkypgirqilekkeglfrkhmmgkrvdyaaRsvicpdmyintneigipmvfatkltypqpvtpwnvqelrqavingpnvhpgasmvinedgsrtalsavdmtqreavakqlltpatgapkpqgtkivcrhvkngdilllnrQPtlhrpsiqahrarilpeekvlrlhyanckaynadfdgdemnahfpqselgraeayvlactdqqylvpkdgqplagliqdhmvsgasmttrgcfftrehymelvyrgltdkvgrvkllspsilkpfplwtgkqvvstlliniipedhiplnlsgkakitgkawvketprsvpgfnpdsmcesqviiregellcgvldkahygssayglvhccyeiyggetsgkvltclarlftaylqlyrgftlgvedilvkpkadvkrqriieesthcgpqavraalnlpeaasydevrgkwqdahlgkdqrdfnmidlkfkeevnhysneinkacmpfglhrqfpenslqmmvqsgakgstvntmqiscllgqielegrrpplmasgkslpcfepyeftpraggfvtgrfltgikppefffhcmagreglvdtavkTSrsgylqrciikhleglvvqydltvrdsdgsvvqflygedgldipktqflqpkqfpflasnyevimksqhlhevlsradpkkalhhfraikkwqskhpntllrrgaflsysqkiqeavkalklesenrngrspgtqemlrmwyeldeesrrkyqkkaaacpdpslsvwrpdiyfasvsetfetkvddysqewaaqteksyekselsldrlrtllqlkwqrslcepgeavgllaaqsigepstqmtlntfhfagrgemnvtlgiprlreilmvasaniktpmmsvpvlntkkalkrvkslkkqltrvclgevlqkidvqesfcmeekqnkfqvyqlrfqflphayyqqekclrpedilrfmetrffkllmesikkknnkerrvqavreihpfiddyqydteeslwcqvtvklplmkinfdmsslvvslahgaviyatkgitrcllnettnnknekelvlnteginlpelfkyaevldlrrlysndihaiantygieaalrviekeikdvfavygiavdprhlslvadymcfegvykplnRfgirsnssplqqmtfetsfqflkqatmlgshdelrspsaclvvgkvvrggtglfelkqpl/mdpgsrwrnlpsgpslkhltdpsygipreqqkaalqeltrahvesfnyavheglglavqaippfefafkderisftildavispptvpkgtickeanvypaecrgrrstyrgkltadinwavngiskgiikqflgyvpimvksklcnlrnlppqaliehheeaeemggyfiingiekvirmlimprrnfpiamiRpkwktrgpgytqygvsmhcvreehsavnmnlhylengtvmlnfiyrkelfflplgfalkalvsfsdyqifqelikgkeddsflrnsvsqmlrivmeegcstqkqvlnylgecfrvklnvpdwypneqaaeflfnqcicihlksntekfymlclmtrklfalakgecmednPDslvnqevltpgqlflmflkeklegwlvsikiafdkkaqktsvsmntdnlmriftmgidltkpfeylfatgnlrsktglgllqdsglcvvadklnfirylshfrcvhRgadFakmrtttVrrllpeswgflcpvhtpdgepcglmnhltavcevvtqfvytasipallcnlgvtpidgaphrsysecypvlldgvmvgwvdkdlapgiadslrhfkvlrekrippwmevvlipmtgkpslypglflfttpcrlvrpvqnlalgkeeligtmeqifmnvaifedevfagvtthqelfphsllsvianfipfsdhnqsprnmyqcqmgkqtmgfplltyqdrsdnklyrlqtpqsplvrpsmydyydmdnypigtnaivavisytgydmedamivnkaswergfahgsvyksefidlsekikqgdsslvfgikpgdprvlqkldddglpfigaklqygdpyysylnlntgesfvmyykskencvvdnikvcsndtgsgkfkcvcitmrvprnptigdkfasrhgqkgilsrlwpaedmpftesgmvpdilfnphgfpsrmtigmliesmagksaalhglchdatpfifseensaleyfgemlkaagynfygterlysgisgleleadifigvvyyqrlrhmvsdkfqvrttgardrvtnqpiggrnvqggirfgemerdallahgtsfllhdrlfncsdrsvahvcvkcgsllspllekpprnrkynctlcsrsdtidtvsvpyvfryfvaelaamnikvkldvv >7obb_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF HUMAN RNA POLYMERASE I OPEN COMPLEX organism=HOMO SAPIENS DNA sequence DT(S28):DA(T16) DT(S29):DA(T15) DG(S30):DC(T14) DT(S31):DA(T13) DC(S32):DG(T12) DT(S33):DA(T11) DA(S34):DT(T10) DA(S35):DT(T9) chainA (1450) ARG1659 0 5 1 0 0 0 0 0 prot.sequence knmpwrrlqgisfgmysaeelkklsvksitnpryldslgnpsanglydlalgpadskevcstcvqdfsncsghlghielpltvynpllfdklylllrgsclnchmltcpravihlllcqlrvlevgalqavyelerilnrfleenpdpsaseireeleqytteivqnnllgsqgahvknvcesksklialfwkahmnakrcphcktgrsvvrkehnskltitfgyltptsarehlsalwknegfflnylfsgmrfnpsvffldflvvppsryrpvsrlgdqmftngqtvnlqavmkdvvlirkllalmaqflstlpgqslidklyniwirlqshvnivfdsemdklmmdkypgirqilekkeglfrkhmmgkrvdyaarsvicpdmyintneigipmvfatkltypqpvtpwnvqelrqavingpnvhpgasmvinedgsrtalsavdmtqreavakqlltkivcrhvkngdilllnrqptlhrpsiqahrarilpeekvlrlhyanckaynadfdgdemnahfpqselgraeayvlactdqqylvpkdgqplagliqdhmvsgasmttrgcfftrehymelvyrgltdkvgrvkllspsilkpfplwtgkqvvstlliniipedhiplnlsgkakitgkawvketprsvpgfnpdsmcesqviiregellcgvldkahygssayglvhccyeiyggetsgkvltclarlftaylqlyrgftlgvedilvkpkadvkrqriieesthcgpqavraalnlpeaasydevrgkwqdahlgkdqrdfnmidlkfkeevnhysneinkacmpfglhrqfpenslqmmvqsgakgstvntmqiscllgqielegrrpplmasgkslpcfepyeftpraggfvtgrfltgikppefffhcmagreglvdtavkgylqrciikhleglvvqydltvrdsdgsvvqflygedgldipktqflqpkqfpflasnyevimksqhlhevlsradpkkalhhfraikkwqskhpntllrrgaflsysqkiqeavkalklesenrngrspgtqemlrmwyeldeesrrkyqkkaaacpdpslsvwrpdiyfasvsetfetkvddysqewaaqteksyekselsldrlrtllqlkwqrslcepgeavgllaaqsigepstqmtlnmnvtlgiprlreilmvasaniktpmmsvpvlntkkalkrvkslkkqltrvclgevlqkidvqesfcmeekqnkfqvyqlrfqflphayyqqekclrpedilrfmetrffkllmesikkknnkrnvntrratqrdeeghivrvqavreihpfiddyqydteeslwcqvtvklplmkinfdmsslvvslahgaviyatkgitrcllnettnnknekelvlnteginlpelfkyaevldlrrlysndihaiantygieaalrviekeikdvfavygiavdprhlslvadymcfegvykplnRfgirsnssplqqmtfetsfqflkqatmlgshdelrspsaclvvgkvvrggtglfelkqpl >7obn_A:DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=STRUCTURAL INVESTIGATIONS OF A NEW L3 DNA LIGASE: STRUCTURE-FUNCTION ANALYSIS organism=Burkholderia pseudomallei DNA sequence DT(B1):DA(C42) DT(B2):DA(C41) DC(B3):DG(C40) DC(B4):DG(C39) DG(B5):DC(C38) DA(B6):DT(C37) DT(B7):DA(C36) DA(B8):DT(C35) DG(B9):DC(C34) DT(B10):DA(C33) DG(B11):DC(C32) DG(B12):DC(C31) DG(B13):OMC(C30) DG(B14):DC(C29) DT(B15):DA(C28) DC(B16):DG(C27) DG(B17):DC(C26) DC(B18):DG(C25) DA(B19):DT(C24) DA(B20):DT(C23) DT(B21):DA(C22) chainA ( 33) ILE34 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 85) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 (213) ARG227 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (252) THR271 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 (289) HIS308 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 prot.sequence tiptgfkpmlaatltkpelikfpvwaspkidgircvffggvaysrslkpipnpvvqefaaayasllegldgeltvgsptdancmQnsmavmskdftfhvfdwfplrdemgydrrseiverriadfyardikavpqhlcvcaedldtlearfladgyegmmirahsgtykcgrsteregglvkvkrfvdgeavivgfeeemrneneatrnatgRterstaqaglvgketlgalvvrrfeepygpvgpefnigTgftaaqrrdywqgrdgligrvvkfkhfdhgtvdaprHpvfigfrhpe >7ogs_A:"Winged_helix"_DNA-binding_domain; title=X-RAY STRUCTURE OF INTERFERON REGULATORY FACTOR 4 DNA BINDING DOMAIN BOUND TO AN INTERFERON-STIMULATED RESPONSE ELEMENT organism=Homo sapiens DNA sequence DG(C2):DC(D20) DT(C3):DA(D19) DA(C4):DT(D18) DC(C5):DG(D17) DT(C6):DA(D16) DT(C7):DA(D15) DT(C8):DA(D14) DC(C9):DG(D13) DG(C10):DC(D12) DG(C11):DC(D11) DT(C12):DA(D10) DT(C13):DA(D9) DT(C14):DA(D8) DC(C15):DG(D7) DA(C16):DT(D6) DG(C17):DC(D5) DT(C18):DA(D4) DT(C19):DA(D3) DA(C20):DT(D2) chainA ( 76) THR95 0 0 0 0 0 0 0 0 0 0 0 1 2 0 3 0 0 0 0 ( 79) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 0 0 ( 80) CYS99 0 0 0 0 0 0 0 0 0 0 1 7 2 0 0 0 0 0 0 ( 83) ASN102 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) LYS103 0 0 0 0 0 0 0 0 0 5 9 9 0 0 0 0 0 0 0 prot.sequence gngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalNKsndfeelversqldisdpykvyrivpegak >7ogs_AB:"Winged_helix"_DNA-binding_domain; title=X-RAY STRUCTURE OF INTERFERON REGULATORY FACTOR 4 DNA BINDING DOMAIN BOUND TO AN INTERFERON-STIMULATED RESPONSE ELEMENT organism=Homo sapiens DNA sequence DG(C2):DC(D20) DT(C3):DA(D19) DA(C4):DT(D18) DC(C5):DG(D17) DT(C6):DA(D16) DT(C7):DA(D15) DT(C8):DA(D14) DC(C9):DG(D13) DG(C10):DC(D12) DG(C11):DC(D11) DT(C12):DA(D10) DT(C13):DA(D9) DT(C14):DA(D8) DC(C15):DG(D7) DA(C16):DT(D6) DG(C17):DC(D5) DT(C18):DA(D4) DT(C19):DA(D3) DA(C20):DT(D2) chainA ( 76) THR95 0 0 0 0 0 0 0 0 0 0 0 1 2 0 3 0 0 0 0 ( 79) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 0 0 ( 80) CYS99 0 0 0 0 0 0 0 0 0 0 1 7 2 0 0 0 0 0 0 ( 83) ASN102 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) LYS103 0 0 0 0 0 0 0 0 0 5 9 9 0 0 0 0 0 0 0 chainB ( 76) THR95 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ARG98 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 ( 80) CYS99 0 0 0 0 2 8 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ASN102 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 84) LYS103 0 0 0 7 7 9 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalNKsndfeelversqldisdpykvyrivpegak/gngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalNKsndfeelversqldisdpykvyrivpegak >7ogs_EF:"Winged_helix"_DNA-binding_domain; title=X-RAY STRUCTURE OF INTERFERON REGULATORY FACTOR 4 DNA BINDING DOMAIN BOUND TO AN INTERFERON-STIMULATED RESPONSE ELEMENT organism=Homo sapiens DNA sequence DT(H2):DA(G20) DA(H3):DT(G19) DA(H4):DT(G18) DC(H5):DG(G17) DT(H6):DA(G16) DG(H7):DC(G15) DA(H8):DT(G14) DA(H9):DT(G13) DA(H10):DT(G12) DC(H11):DG(G11) DC(H12):DG(G10) DG(H13):DC(G9) DA(H14):DT(G8) DA(H15):DT(G7) DA(H16):DT(G6) DG(H17):DC(G5) DT(H18):DA(G4) DA(H19):DT(G3) DC(H20):DG(G2) chainE ( 76) THR95 0 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ARG98 0 0 0 0 10 8 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) CYS99 0 0 0 0 0 0 2 7 2 0 0 0 0 0 0 0 0 0 0 ( 83) ASN102 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) LYS103 0 0 0 0 0 0 0 6 7 6 0 0 0 0 0 0 0 0 0 chainF ( 76) THR95 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 79) ARG98 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 ( 80) CYS99 0 0 0 0 0 0 0 0 0 0 0 0 2 6 2 0 0 0 0 ( 84) LYS103 0 0 0 0 0 0 0 0 0 0 0 0 2 9 7 4 0 0 0 prot.sequence gngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalNKsndfeelversqldisdpykvyrivpegak/gngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelversqldisdpykvyrivpegak >7oh9_D:Histone-fold; title=NUCLEOSOME WITH TBP AND TFIIA BOUND AT SHL -6 organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainD ( 1) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7oha_G:Histone-fold; title=NUCLEOSOME WITH TBP AND TFIIA BOUND AT SHL +2 organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >7ohb_G:Histone-fold; title=TBP-NUCLEOSOME COMPLEX organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainG ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >7ohc_A:Histone-fold; title=CRYO-EM STRUCTURE OF NUCLEOSOME CORE PARTICLE COMPOSED OF THE WIDOM 601 DNA SEQUENCE organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >7ohc_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF NUCLEOSOME CORE PARTICLE COMPOSED OF THE WIDOM 601 DNA SEQUENCE organism=XENOPUS LAEVIS DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/RRktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/rdnIQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/ktrkesyaiyvykvlkqvhpdtgisskamSimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7okx_ABE: title=STRUCTURE OF ACTIVE TRANSCRIPTION ELONGATION COMPLEX POL II-DSIF (SPT5-KOW5)-ELL2-EAF1 (COMPOSITE STRUCTURE) organism=SUS SCROFA DNA sequence DT(N7):DG(T30) DA(N8):DG(T29) DG(N9):DG(T28) DT(N10):DT(T27) DA(N11):DG(T26) DC(N12):DA(T25) DC(N13):DC(T24) DT(N14):DG(T23) DT(N27):DA(T22) DT(N28):DA(T21) DA(N29):DT(T20) DA(N30):DT(T19) DG(N31):DC(T18) DC(N32):DG(T17) DC(N33):DG(T16) DT(N34):DA(T15) DC(N35):DG(T14) DA(N36):DT(T13) DA(N37):DT(T12) DT(N38):DA(T11) DA(N39):DT(T10) DA(N40):DT(T9) DA(N41):DT(T8) DG(N42):DC(T7) DC(N43):DG(T6) chainA (326) ARG364 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) GLN461 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) PRO462 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (816) THR854 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (817) ALA855 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1338) ARG1416 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicegggcgryqprirrsglelyaewkhvqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnklvlririmnkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/deitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqappryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlargaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcEtkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgDQkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkLDddgliapgvrvsgddviigktvtlprytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >7oky_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURE OF ACTIVE TRANSCRIPTION ELONGATION COMPLEX POL II-DSIF-ELL2- EAF1(COMPOSITE STRUCTURE) organism=SUS SCROFA DNA sequence DT(N7):DG(T30) DA(N8):DG(T29) DG(N9):DG(T28) DT(N10):DT(T27) DA(N11):DG(T26) DC(N12):DA(T25) DC(N13):DC(T24) DT(N14):DG(T23) DT(N27):DA(T22) DT(N28):DA(T21) DA(N29):DT(T20) DA(N30):DT(T19) DG(N31):DC(T18) DC(N32):DG(T17) DC(N33):DG(T16) DT(N34):DA(T15) DC(N35):DG(T14) DA(N36):DT(T13) DA(N37):DT(T12) DT(N38):DA(T11) DA(N39):DT(T10) DA(N40):DT(T9) DA(N41):DT(T8) DG(N42):DC(T7) DC(N43):DG(T6) chainA (326) ARG364 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) GLN461 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) PRO462 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (816) THR854 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (817) ALA855 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1338) ARG1416 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicegggcgryqprirrsglelyaewkhvqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnklvlririmnkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme >7oky_ABE: title=STRUCTURE OF ACTIVE TRANSCRIPTION ELONGATION COMPLEX POL II-DSIF-ELL2- EAF1(COMPOSITE STRUCTURE) organism=SUS SCROFA DNA sequence DT(N7):DG(T30) DA(N8):DG(T29) DG(N9):DG(T28) DT(N10):DT(T27) DA(N11):DG(T26) DC(N12):DA(T25) DC(N13):DC(T24) DT(N14):DG(T23) DT(N27):DA(T22) DT(N28):DA(T21) DA(N29):DT(T20) DA(N30):DT(T19) DG(N31):DC(T18) DC(N32):DG(T17) DC(N33):DG(T16) DT(N34):DA(T15) DC(N35):DG(T14) DA(N36):DT(T13) DA(N37):DT(T12) DT(N38):DA(T11) DA(N39):DT(T10) DA(N40):DT(T9) DA(N41):DT(T8) DG(N42):DC(T7) DC(N43):DG(T6) chainA (326) ARG364 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) GLN461 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) PRO462 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (816) THR854 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (817) ALA855 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1338) ARG1416 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicegggcgryqprirrsglelyaewkhvqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnklvlririmnkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/deitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqappryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlargaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcEtkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgDQkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkLDddgliapgvrvsgddviigktvtlprytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >7ol0_ABE: title=STRUCTURE OF ACTIVE TRANSCRIPTION ELONGATION COMPLEX POL II-DSIF (SPT5-KOW5) organism=SUS SCROFA DNA sequence DT(N7):DG(T30) DA(N8):DG(T29) DG(N9):DG(T28) DT(N10):DT(T27) DA(N11):DG(T26) DC(N12):DA(T25) DC(N13):DC(T24) DT(N14):DG(T23) DT(N27):DA(T22) DT(N28):DA(T21) DA(N29):DT(T20) DA(N30):DT(T19) DG(N31):DC(T18) DC(N32):DG(T17) DC(N33):DG(T16) DT(N34):DA(T15) DC(N35):DG(T14) DA(N36):DT(T13) DA(N37):DT(T12) DT(N38):DA(T11) DA(N39):DT(T10) DA(N40):DT(T9) DA(N41):DT(T8) DG(N42):DC(T7) DC(N43):DG(T6) chainA (293) LYS331 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) ARG364 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) GLN461 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) PRO462 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (816) THR854 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (817) ALA855 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1338) ARG1416 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (460) ASP569 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (462) LYS571 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicegggcgryqprirrsglelyaewkhvqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnklvlririmnkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/deitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqappryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlargaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrDgKlakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlprytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >7ol9_AB:KorB_DNA-binding_domain-like;ParB/Sulfiredoxin; title=CRYSTAL STRUCTURE OF C-TERMINALLY TRUNCATED BACILLUS SUBTILIS NUCLEOID OCCLUSION PROTEIN (NOC) COMPLEXED TO THE NOC-BINDING SITE (NBS) organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DA(C2):DT(D15) DT(C3):DA(D14) DT(C4):DA(D13) DT(C5):DA(D12) DC(C6):DG(D11) DC(C7):DG(D10) DC(C8):DG(D9) DG(C9):DC(D8) DG(C10):DC(D7) DG(C11):DC(D6) DA(C12):DT(D5) DA(C13):DT(D4) DA(C14):DT(D3) DT(C15):DA(D2) DA(C16):DT(D1) chainA (129) GLN158 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 (130) SER159 0 0 0 0 0 0 0 0 0 0 5 9 5 0 0 (131) THR160 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (133) ALA162 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 (134) ASN163 0 0 0 0 0 0 0 0 0 0 1 9 9 0 0 (137) ARG166 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 (157) ARG186 0 0 0 0 0 0 0 4 16 19 0 0 0 0 0 (160) ARG189 0 0 0 0 0 0 0 0 0 14 7 0 0 0 0 (185) VAL214 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 chainB (131) GLN158 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) SER159 0 5 9 5 0 0 0 0 0 0 0 0 0 0 0 (133) THR160 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (135) ALA162 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) ASN163 0 9 9 1 0 0 0 0 0 0 0 0 0 0 0 (139) ARG166 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 (159) ARG186 0 0 0 0 20 18 5 0 0 0 0 0 0 0 0 (162) ARG189 0 0 0 7 12 0 0 0 0 0 0 0 0 0 0 (187) VAL214 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence ileipvnaivpnrfqprtifsdekikelamtihthgiiqpivvrhteeegqyeliagerrwravqslewekipaiikdfsdtetasvalienlqreelssieeahayarllelhdltqealaqrlgkgQSTiANklRllklpqpvqeaimekkiteRhaRaliplkqpelqvtllteiiekslnVkqtedrvvkmleqgqr/eeileipvnaivpnrfqprtifsdekikelamtihthgiiqpivvrhteeegqyeliagerrwravqslewekipaiikdfsdtetasvalienlqreelssieeahayarllelhdltqealaqrlgkgQSTiANklRllklpqpvqeaimekkiteRhaRaliplkqpelqvtllteiiekslnVkqtedrvvkmleqgqr >7ol9_B:KorB_DNA-binding_domain-like;ParB/Sulfiredoxin; title=CRYSTAL STRUCTURE OF C-TERMINALLY TRUNCATED BACILLUS SUBTILIS NUCLEOID OCCLUSION PROTEIN (NOC) COMPLEXED TO THE NOC-BINDING SITE (NBS) organism=Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) DNA sequence DT(D1):DA(C16) DA(D2):DT(C15) DT(D3):DA(C14) DT(D4):DA(C13) DT(D5):DA(C12) DC(D6):DG(C11) DC(D7):DG(C10) DC(D8):DG(C9) DG(D9):DC(C8) DG(D10):DC(C7) DG(D11):DC(C6) DA(D12):DT(C5) DA(D13):DT(C4) DA(D14):DT(C3) DT(D15):DA(C2) chainB (131) GLN158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (132) SER159 0 0 0 0 0 0 0 0 0 0 0 5 9 5 0 (133) THR160 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (135) ALA162 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (136) ASN163 0 0 0 0 0 0 0 0 0 0 0 1 9 9 0 (139) ARG166 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 (159) ARG186 0 0 0 0 0 0 0 0 5 18 20 0 0 0 0 (162) ARG189 0 0 0 0 0 0 0 0 0 0 12 7 0 0 0 (187) VAL214 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence eeileipvnaivpnrfqprtifsdekikelamtihthgiiqpivvrhteeegqyeliagerrwravqslewekipaiikdfsdtetasvalienlqreelssieeahayarllelhdltqealaqrlgkgQSTiANklRllklpqpvqeaimekkiteRhaRaliplkqpelqvtllteiiekslnVkqtedrvvkmleqgqr >7om3_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF KOD DNA POLYMERASE IN A BINARY COMPLEX WITH HYPOXANTHINE CONTAINING TEMPLATE organism=THERMOCOCCUS KODAKARENSIS KOD1 DNA sequence DG(P1):DC(T21) DA(P2):DT(T20) DC(P3):DG(T19) DC(P4):DG(T18) DA(P5):DT(T17) DC(P6):DG(T16) DG(P7):DC(T15) DG(P8):DC(T14) DC(P9):DG(T13) DC(P10):DG(T12) DA(P11):DT(T11) DOC(P12):DG(T10) chainA (494) TYR494 0 0 0 0 0 0 0 0 0 0 0 2 (592) LYS592 0 0 0 0 0 0 0 0 0 7 7 0 (612) ARG612 0 0 0 0 0 0 0 5 8 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslYpsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqraikilansyYgyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklviheqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdptkhkydaeyyienqvlpaverilrafgyrkedlryqk >7omb_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF KOD DNA POLYMERASE IN A TERNARY COMPLEX WITH A P/T DUPLEX CONTAINING AN EXTENDED 5' SINGLE STRANDED TEMPLATE OVERHANG organism=THERMOCOCCUS KODAKARENSIS KOD1 DNA sequence DT(T11):DA(P11) DG(T12):DC(P10) DG(T13):DC(P9) DC(T14):DG(P8) DC(T15):DG(P7) DG(T16):DC(P6) DT(T17):DA(P5) DG(T18):DC(P4) DG(T19):DC(P3) DT(T20):DA(P2) DC(T21):DG(P1) chainA (592) LYS592 6 8 0 0 0 0 0 0 0 0 0 (612) ARG612 0 0 7 5 0 0 0 0 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqraikilansyygyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklviheqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdptkhkydaeyyienqvlpaverilrafgyrkedlr >7omg_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF KOD DNA POLYMERASE IN A TERNARY COMPLEX WITH AN URACIL CONTAINING TEMPLATE organism=THERMOCOCCUS KODAKARENSIS KOD1 DNA sequence DG(P1):DC(T21) DA(P2):DT(T20) DC(P3):DG(T19) DC(P4):DG(T18) DA(P5):DT(T17) DC(P6):DG(T16) DG(P7):DC(T15) DG(P8):DC(T14) DC(P9):DG(T13) DC(P10):DG(T12) DA(P11):DT(T11) chainA (592) LYS592 0 0 0 0 0 0 0 0 0 9 6 (612) ARG612 0 0 0 0 0 0 0 6 7 0 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqraikilansyygyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklviheqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdptkhkydaeyyienqvlpaverilra >7on1_abcdefgh:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CENP-A NUCLEOSOME IN COMPLEX WITH CENP-C organism=SACCHAROMYCES CEREVISIAE DNA sequence DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) chainb chaind ( 4) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaine ( 45) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainf chaing chainh ( 3) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainc ( 28) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaina prot.sequence tpselalyeirkyqrstdlliskipfarlvkevtdefttkdqdlrwqsmaimalqeaseaylvgllehtnllalhakritimkkdmqlarrirgqfi/dniqgitkpairrlarrggvkrisgliyeevravlksflesvirdsvtytehakrktvtsldvvyalkrqgrtlygfgg/qsrsakagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpni/skaRketyssyiykvlkqthpdtgisqksmsilnsfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkysss/tpselalyeirkyqrstdlliskipfarlvkevtdefttkdqdlRwqsmaimalqeaseaylvgllehtnllalhakritimkkdmqlarrirgqfi/dniqgitkpairrlarrggvkrisgliyeevravlksflesvirDsvtytehakrktvtsldvvyalkrqgrtlygfgg/qsrsakagltfpvgrvhrllrrgnyaqrigsgapvyltavleylAaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpni/kaRketyssyiykvlkqthpdtgisqksmsilnsfvndiferiateasklaaynkkstisareiqtavrlilpgelakhavsegtravtkysss >7on1_c:Histone-fold; title=CENP-A NUCLEOSOME IN COMPLEX WITH CENP-C organism=? DNA sequence DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) chainc ( 28) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qsrsakagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkktriiprhlqlairnddelnkllgnvtiaqggvlpni >7on1_e:Histone-fold; title=CENP-A NUCLEOSOME IN COMPLEX WITH CENP-C organism=? DNA sequence DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) chaine ( 45) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tpselalyeirkyqrstdlliskipfarlvkevtdefttkdqdlRwqsmaimalqeaseaylvgllehtnllalhakritimkkdmqlarrirgqfi >7oob_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=POL II-CSB-CSA-DDB1-UVSSA-ADPBEF3 (STRUCTURE2) organism=? DNA sequence DC(N1):DG(T47) DT(N2):DA(T46) DA(N3):DT(T45) DG(N4):DC(T44) DT(N5):DA(T43) DT(N6):DA(T42) DG(N7):DC(T41) DA(N8):DT(T40) DT(N9):DA(T39) DC(N10):DG(T38) DT(N11):DA(T37) DC(N12):DG(T36) DA(N13):DT(T35) DT(N14):DA(T34) DA(N15):DT(T33) DT(N16):DC(T32) DC(N29):DG(T31) DA(N30):DG(T30) DG(N31):DT(T29) DG(N32):DA(T28) DA(N33):DG(T27) DG(N34):DC(T26) DA(N35):DT(T25) DA(N36):DC(T24) DG(N37):DT(T23) DG(N38):DC(T22) DA(N39):DC(T21) DG(N40):DT(T20) DC(N41):DA(T19) DA(N42):DC(T18) DG(N43):DC(T17) DA(N44):DC(T16) DG(N45):DT(T15) DC(N46):DC(T14) DG(N47):DT(T13) chainA ( 35) GLU45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) MET266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ALA270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) LYS285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (415) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (416) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 (808) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 (809) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (1347) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypEtteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggcgryqprirrsglelyaewkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsArnqddlthkladivKinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlnaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekck >7oot_AB:"Winged_helix"_DNA-binding_domain; title=X-RAY STRUCTURE OF INTERFERON REGULATORY FACTOR 4 DNA BINDING DOMAIN BOUND TO AN INTERFERON-STIMULATED RESPONSE ELEMENT organism=Homo sapiens DNA sequence DC(C2):DG(E20) DA(C3):DT(E19) DA(C4):DT(E18) DC(C5):DG(E17) DT(C6):DA(E16) DG(C7):DC(E15) DA(C8):DT(E14) DA(C9):DT(E13) DA(C10):DT(E12) DC(C11):DG(E11) DC(C12):DG(E10) DG(C13):DC(E9) DA(C14):DT(E8) DG(C15):DC(E7) DA(C16):DT(E6) DA(C17):DT(E5) DA(C18):DT(E4) DG(C19):DC(E3) DC(C20):DG(E2) chainA ( 77) ARG98 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 ( 78) CYS99 0 0 0 0 0 0 0 0 0 0 0 1 1 2 1 0 0 0 0 ( 81) ASN102 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 82) LYS103 0 0 0 0 0 0 0 0 0 0 0 0 5 9 7 2 0 0 0 chainB ( 74) THR95 0 0 0 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG98 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) CYS99 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 ( 81) ASN102 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LYS103 0 0 0 0 0 0 0 0 4 16 5 0 0 0 0 0 0 0 0 prot.sequence gklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwktrlRCalNKsndfeelversqldisdpykvyrivpega/gklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalNKsndfeelversqldisdpykvyrivpega >7oot_B:"Winged_helix"_DNA-binding_domain; title=X-RAY STRUCTURE OF INTERFERON REGULATORY FACTOR 4 DNA BINDING DOMAIN BOUND TO AN INTERFERON-STIMULATED RESPONSE ELEMENT organism=Homo sapiens DNA sequence DC(C2):DG(E20) DA(C3):DT(E19) DA(C4):DT(E18) DC(C5):DG(E17) DT(C6):DA(E16) DG(C7):DC(E15) DA(C8):DT(E14) DA(C9):DT(E13) DA(C10):DT(E12) DC(C11):DG(E11) DC(C12):DG(E10) DG(C13):DC(E9) DA(C14):DT(E8) DG(C15):DC(E7) DA(C16):DT(E6) DA(C17):DT(E5) DA(C18):DT(E4) DG(C19):DC(E3) DC(C20):DG(E2) chainB ( 74) THR95 0 0 0 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG98 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) CYS99 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 ( 81) ASN102 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LYS103 0 0 0 0 0 0 0 0 4 16 5 0 0 0 0 0 0 0 0 prot.sequence gklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalNKsndfeelversqldisdpykvyrivpega >7opc_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=POL II-CSB-CRL4CSA-UVSSA-SPT6-PAF (STRUCTURE 4) organism=? DNA sequence DC(N1):DG(T47) DT(N2):DA(T46) DA(N3):DT(T45) DG(N4):DC(T44) DT(N5):DA(T43) DT(N6):DA(T42) DG(N7):DC(T41) DA(N8):DT(T40) DT(N9):DA(T39) DC(N10):DG(T38) DT(N11):DA(T37) DC(N12):DG(T36) DA(N13):DT(T35) DT(N14):DA(T34) DA(N15):DT(T33) DT(N16):DC(T32) DC(N29):DG(T31) DA(N30):DG(T30) DG(N31):DT(T29) DG(N32):DA(T28) DA(N33):DG(T27) DG(N34):DC(T26) DA(N35):DT(T25) DA(N36):DC(T24) DG(N37):DT(T23) DG(N38):DC(T22) DA(N39):DC(T21) DG(N40):DT(T20) DC(N41):DA(T19) DA(N42):DC(T18) DG(N43):DC(T17) DA(N44):DC(T16) DG(N45):DT(T15) DC(N46):DC(T14) DG(N47):DT(T13) chainA ( 34) PRO44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLU45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) MET266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) GLN267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) ASN272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) LYS285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (415) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (416) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (808) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 (809) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (1347) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikyPEtteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgkniceggcgryqprirrsglelyaewkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMQgsarNqddlthkladivKinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlnaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekck >7ot6_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-282 organism=? DNA sequence DC(T706):DDG(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) MET184 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 8 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7ot6_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-282 organism=? DNA sequence DC(E706):DDG(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) chainC ( 95) ILE94 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) MET184 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 1 0 chainD prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7ota_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-230 organism=? DNA sequence DC(T706):DDG(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO157 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) MET184 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 3 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlsklLrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7ota_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-230 organism=? DNA sequence DC(E706):DDG(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 95) ILE94 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) MET184 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 12 0 0 0 chainD prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7otk_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-233 organism=? DNA sequence DC(T706):DDG(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO157 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >7otk_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-233 organism=? DNA sequence DC(T706):DDG(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO157 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (477) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7otk_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-233 organism=? DNA sequence DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) MRG(F817):DC(E711) DC(F818):DG(E710) DG(F819):DC(E709) DC(F820):DG(E708) DC(F821):DG(E707) DDG(F822):DC(E706) chainC ( 95) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (116) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (158) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (184) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 (185) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 chainD prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7otn_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-247 organism=? DNA sequence DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DDG(P822):DC(T706) chainA ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 (117) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (159) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 (186) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 (358) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (450) ARG448 4 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLN475 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >7otn_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-247 organism=? DNA sequence DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DDG(P822):DC(T706) chainA ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 (117) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (159) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 (186) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 (358) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (450) ARG448 4 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLN475 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpLdedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7otn_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-247 organism=? DNA sequence DC(E706):DDG(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 95) ILE94 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) PRO157 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) MET184 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 12 0 0 0 chainD prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7otq_E:Histone-fold; title=CRYO-EM STRUCTURE OF ALC1/CHD1L BOUND TO A PARYLATED NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) DA(I73):DT(J-73) DG(I74):DC(J-74) DG(I75):DC(J-75) DC(I76):DG(J-76) chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirgera >7otx_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-257 organism=? DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DDG(P822):DC(T706) chainA ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 (117) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (159) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 (186) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (358) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (450) ARG448 0 5 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >7otx_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-257 organism=? DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DDG(P822):DC(T706) chainA ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 (117) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (159) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 (186) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (358) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (450) ARG448 0 5 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7otx_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-257 organism=? DNA sequence DC(E706):DDG(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 95) ILE94 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) MET184 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 2 0 0 chainD prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqymddLyvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7otz_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-259 organism=? DNA sequence DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) MRG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DDG(P822):DC(T706) chainA ( 96) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 (117) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (159) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (185) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 (186) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 (260) CYS258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (450) ARG448 0 4 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (477) GLN475 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7otz_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-259 organism=? DNA sequence DC(E706):DDG(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):MRG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) chainC ( 95) ILE94 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) MET184 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 6 0 0 chainD prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvPldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7oue_C:DNA-glycosylase; title=CRYSTAL STRUCTURE OF A TRAPPED PAB-AGOG/SINGLE-STANDED DNA COVALENT INTERMEDIATE organism=Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) DNA sequence DT(D1) DT(D2) DT(D3) DT(D5) DT(D6) DT(D7) DC(D8) DT(D9) chainC ( 55) TYR52 0 0 0 3 0 0 0 0 ( 56) GLN53 0 0 0 27 0 0 0 0 ( 58) THR55 0 0 1 0 0 0 0 0 ( 60) LYS57 0 0 1 0 0 0 0 0 ( 96) ARG93 5 4 5 0 0 0 0 0 ( 97) LEU94 0 0 0 1 0 0 0 0 (100) GLN97 0 0 0 0 5 0 0 0 (140) VAL137 0 0 0 0 0 0 1 0 prot.sequence gshmiariigeigiegarfieenideqfkalrylskgidsetfvklvianslvsYQlTgKgeqwwwefakyfygrdvksiylaykeflpnsrfnrRLipQklsrirrvetflstlteerieeyygdmsslwgsiaralgVdkesktvvfsvkmfgyaarivlstfnpypmeipipedsrivkltkkltnekprkfwmkiaresgvpplhidsilwpllggasidsappelrdklaelikiir >7ouf_B:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF THE STLV INTASOME:B56 COMPLEX BOUND TO THE STRAND- TRANSFER INHIBITOR XZ450 organism=? DNA sequence DG(H2):DC(K21) DA(H3):DT(K20) DG(H4):DC(K19) DA(H5):DT(K18) DG(H6):DC(K17) DA(H7):DT(K16) DA(H8):DT(K15) DG(H9):DC(K14) DC(H10):DG(K13) DG(H11):DC(K12) DC(H12):DG(K11) DC(H13):DG(K10) DA(H14):DT(K9) DA(H15):DT(K8) DA(H16):DT(K7) DC(H17):DG(K6) DA(H18):DT(K5) DC(H19):DG(K4) chainB ( 47) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (150) THR152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (156) GLU158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (157) ARG159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 7 1 (196) THR198 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 (197) HIS199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence spaklhsfthcgqaaltlhgatttealnilhschacrknnpqhqmpRghirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipynpTssglvERtngilktllykyfsdnpnlpmdnalsvalwtinhlnvlTHcqktrwqlhhsprlppipeekpvttskthwyyfkipglnsrqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr >7ouf_BD:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF THE STLV INTASOME:B56 COMPLEX BOUND TO THE STRAND- TRANSFER INHIBITOR XZ450 organism=? DNA sequence DG(H2):DC(K21) DA(H3):DT(K20) DG(H4):DC(K19) DA(H5):DT(K18) DG(H6):DC(K17) DA(H7):DT(K16) DA(H8):DT(K15) DG(H9):DC(K14) DC(H10):DG(K13) DG(H11):DC(K12) DC(H12):DG(K11) DC(H13):DG(K10) DA(H14):DT(K9) DA(H15):DT(K8) DA(H16):DT(K7) DC(H17):DG(K6) DA(H18):DT(K5) DC(H19):DG(K4) chainD (218) ARG240 0 0 0 0 0 0 0 0 0 0 1 7 9 0 0 0 0 0 chainB ( 47) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (150) THR152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (156) GLU158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (157) ARG159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 7 1 (196) THR198 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 (197) HIS199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence spaklhsfthcgqaaltlhgatttealnilhschacrknnpqhqmpRghirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipynpTssglvERtngilktllykyfsdnpnlpmdnalsvalwtinhlnvlTHcqktrwqlhhsprlppipeekpvttskthwyyfkipglnsrqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr/spaklhsfthcgqaaltlhgatttealnilhschacrirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipvertngilktllykyfsdnpnlpmdnalsvalwtinhlnvlthcqktrwqlhhsprlppipeekpvttskthwyyfkipglnsRqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr >7oug_AB:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=STLV-1 INTASOME:B56 IN COMPLEX WITH THE STRAND-TRANSFER INHIBITOR RALTEGRAVIR organism=? DNA sequence DG(K4):DC(L19) DT(K5):DA(L18) DG(K6):DC(L17) DT(K7):DA(L16) DT(K8):DA(L15) DT(K9):DA(L14) DG(K10):DC(L13) DG(K11):DC(L12) DC(K12):DG(L11) DG(K13):DC(L10) DC(K14):DG(L9) DT(K15):DA(L8) DT(K16):DA(L7) DC(K17):DG(L6) DT(K18):DA(L5) DT(K20):DA(L3) DC(K21):DG(L2) chainA chainB (150) THR152 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) GLU158 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) ARG159 2 6 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) THR198 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 (197) HIS199 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spaklhsfthcgqaaltlhgatttealnilhschacrirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipvertngilktllykyfsdnpnlpmdnalsvalwtinhlnvlthcqktrwqlhhsprlppipeekpvttskthwyyfkipglnsrqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr/spaklhsfthcgqaaltlhgatttealnilhschacrknnpqhqmprghirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipynpTssglvERtngilktllykyfsdnpnlpmdnalsvalwtinhlnvlTHcqktrwqlhhsprlppipeekpvttskthwyyfkipglnsrqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr >7oug_B:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=STLV-1 INTASOME:B56 IN COMPLEX WITH THE STRAND-TRANSFER INHIBITOR RALTEGRAVIR organism=? DNA sequence DG(K4):DC(L19) DT(K5):DA(L18) DG(K6):DC(L17) DT(K7):DA(L16) DT(K8):DA(L15) DT(K9):DA(L14) DG(K10):DC(L13) DG(K11):DC(L12) DC(K12):DG(L11) DG(K13):DC(L10) DC(K14):DG(L9) DT(K15):DA(L8) DT(K16):DA(L7) DC(K17):DG(L6) DT(K18):DA(L5) DT(K20):DA(L3) DC(K21):DG(L2) chainB (150) THR152 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) GLU158 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) ARG159 2 6 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) THR198 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 (197) HIS199 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spaklhsfthcgqaaltlhgatttealnilhschacrknnpqhqmprghirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipynpTssglvERtngilktllykyfsdnpnlpmdnalsvalwtinhlnvlTHcqktrwqlhhsprlppipeekpvttskthwyyfkipglnsrqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr >7oug_DE:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=STLV-1 INTASOME:B56 IN COMPLEX WITH THE STRAND-TRANSFER INHIBITOR RALTEGRAVIR organism=? DNA sequence DG(J2):DC(I21) DA(J3):DT(I20) DA(J5):DT(I18) DG(J6):DC(I17) DA(J7):DT(I16) DA(J8):DT(I15) DG(J9):DC(I14) DC(J10):DG(I13) DG(J11):DC(I12) DC(J12):DG(I11) DC(J13):DG(I10) DA(J14):DT(I9) DA(J15):DT(I8) DA(J16):DT(I7) DC(J17):DG(I6) DA(J18):DT(I5) DC(J19):DG(I4) chainD chainE (150) THR152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (156) GLU158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (157) ARG159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 6 2 (196) THR198 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 (197) HIS199 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence spaklhsfthcgqaaltlhgatttealnilhschacrirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipvertngilktllykyfsdnpnlpmdnalsvalwtinhlnvlthcqktrwqlhhsprlppipeekpvttskthwyyfkipglnsrqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr/spaklhsfthcgqaaltlhgatttealnilhschacrknnpqhqmprghirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipynpTssglvERtngilktllykyfsdnpnlpmdnalsvalwtinhlnvlTHcqktrwqlhhsprlppipeekpvttskthwyyfkipglnsrqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr >7ouh_AB:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF THE STLV INTASOME:B56 COMPLEX BOUND TO THE STRAND- TRANSFER INHIBITOR BICTEGRAVIR organism=? DNA sequence DG(K4):DC(L19) DT(K5):DA(L18) DG(K6):DC(L17) DT(K7):DA(L16) DT(K8):DA(L15) DT(K9):DA(L14) DG(K10):DC(L13) DG(K11):DC(L12) DC(K12):DG(L11) DG(K13):DC(L10) DC(K14):DG(L9) DT(K15):DA(L8) DT(K16):DA(L7) DC(K17):DG(L6) DT(K18):DA(L5) DC(K19):DG(L4) DT(K20):DA(L3) DC(K21):DG(L2) chainA (249) LYS271 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (156) GLU158 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) ARG159 0 5 17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) THR198 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) HIS199 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spaklhsfthcgqaaltlhgatttealnilhschacrirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipvertngilktllykyfsdnpnlpmdnalsvalwtinhlnvlthcqktrwqlhhsprlppipeekpvttskthwyyfkipglnsrqwkgpqralqeaagaalipvsdtaaqwipwKllkravcpr/spaklhsfthcgqaaltlhgatttealnilhschacrknnpqhqmprghirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipynptssglvERtngilktllykyfsdnpnlpmdnalsvalwtinhlnvlTHcqktrwqlhhsprlppipeekpvttskthwyyfkipglnsrqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr >7ouh_D:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF THE STLV INTASOME:B56 COMPLEX BOUND TO THE STRAND- TRANSFER INHIBITOR BICTEGRAVIR organism=? DNA sequence DG(I4):DC(J19) DT(I5):DA(J18) DG(I6):DC(J17) DT(I7):DA(J16) DT(I8):DA(J15) DT(I9):DA(J14) DG(I10):DC(J13) DG(I11):DC(J12) DC(I12):DG(J11) DG(I13):DC(J10) DC(I14):DG(J9) DT(I15):DA(J8) DT(I16):DA(J7) DC(I17):DG(J6) DT(I18):DA(J5) DC(I19):DG(J4) DT(I20):DA(J3) DC(I21):DG(J2) chainD (249) LYS271 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spaklhsfthcgqaaltlhgatttealnilhschacrirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipvertngilktllykyfsdnpnlpmdnalsvalwtinhlnvlthcqktrwqlhhsprlppipeekpvttskthwyyfkipglnsrqwkgpqralqeaagaalipvsdtaaqwipwKllkravcpr >7ouh_DE:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF THE STLV INTASOME:B56 COMPLEX BOUND TO THE STRAND- TRANSFER INHIBITOR BICTEGRAVIR organism=? DNA sequence DG(J2):DC(I21) DA(J3):DT(I20) DG(J4):DC(I19) DA(J5):DT(I18) DG(J6):DC(I17) DA(J7):DT(I16) DA(J8):DT(I15) DG(J9):DC(I14) DC(J10):DG(I13) DG(J11):DC(I12) DC(J12):DG(I11) DC(J13):DG(I10) DA(J14):DT(I9) DA(J15):DT(I8) DA(J16):DT(I7) DC(J17):DG(I6) DA(J18):DT(I5) DC(J19):DG(I4) chainD (249) LYS271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 chainE (156) GLU158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (157) ARG159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 17 5 0 (196) THR198 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 (197) HIS199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence spaklhsfthcgqaaltlhgatttealnilhschacrirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipvertngilktllykyfsdnpnlpmdnalsvalwtinhlnvlthcqktrwqlhhsprlppipeekpvttskthwyyfkipglnsrqwkgpqralqeaagaalipvsdtaaqwipwKllkravcpr/spaklhsfthcgqaaltlhgatttealnilhschacrknnpqhqmprghirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipynptssglvERtngilktllykyfsdnpnlpmdnalsvalwtinhlnvlTHcqktrwqlhhsprlppipeekpvttskthwyyfkipglnsrqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr >7out_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-264 organism=? DNA sequence DC(T706):DDG(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):MRG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) chainA ( 96) ILE94 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PRO157 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TYR183 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) MET184 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) CYS258 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG356 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (450) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 0 chainB prot.sequence mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaGlkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkilepfkkqnpdiviyqymddlYVgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7out_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND INHIBITOR RMC-264 organism=? DNA sequence DC(F803):DG(E725) DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) MRG(F817):DC(E711) DC(F818):DG(E710) DG(F819):DC(E709) DC(F820):DG(E708) DC(F821):DG(E707) DDG(F822):DC(E706) chainC ( 95) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 (116) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (158) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (184) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 (185) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 (357) ARG356 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 1 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyaRmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpAglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifQssmtkilepfkkqnpdiviyqymddLYvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqKittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7owf_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KLENTAQ DNA POLYMERASE IN A TERNARY COMPLEX WITH PRIMER/TEMPLATE AND THE FLUORESCENT NUCLEOTIDE ANALOG BFDUTP organism=Thermus aquaticus DNA sequence DG(C205):DOC(B112) DT(C206):DA(B111) DG(C207):DC(B110) DG(C208):DC(B109) DC(C209):DG(B108) DC(C210):DG(B107) DG(C211):DC(B106) DT(C212):DA(B105) DG(C213):DC(B104) DG(C214):DC(B103) DT(C215):DA(B102) DC(C216):DG(B101) chainA (248) LYS540 0 0 0 5 4 0 0 0 0 0 0 0 (253) TYR545 0 0 1 0 0 0 0 0 0 0 0 0 (281) ARG573 8 2 0 0 0 0 0 0 0 0 0 0 (288) ASN580 0 0 1 0 0 0 0 0 0 0 0 0 (291) ASN583 0 1 7 2 0 0 0 0 0 0 0 0 (462) GLN754 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTYidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake >7ox7_B: title=TARGET-BOUND SPCAS9 COMPLEX WITH TRAC CHIMERIC RNA-DNA GUIDE organism=Streptococcus pyogenes serotype M1 DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DG(C0):DC(D0) chainB (1072) LYS1107 0 0 0 0 0 0 6 5 (1184) GLU1219 0 0 0 0 0 0 2 0 (1290) ARG1333 0 0 0 0 0 1 11 10 (1292) ARG1335 0 0 0 0 6 11 13 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarnsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaerlseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvatakyffysnimnffkteitlgeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdSptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashydneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7ox8_B: title=TARGET-BOUND SPCAS9 COMPLEX WITH TRAC FULL RNA GUIDE organism=Streptococcus pyogenes serotype M1 DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DG(C0):DC(D0) chainB (1073) LYS1107 0 0 0 0 0 1 6 4 (1185) GLU1219 0 0 0 0 0 0 1 0 (1297) ARG1333 0 0 0 0 0 2 11 10 (1299) ARG1335 0 0 0 0 5 14 13 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarensrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitlirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyekgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7ox9_B: title=TARGET-BOUND SPCAS9 COMPLEX WITH AAVS1 ALL-RNA GUIDE organism=Streptococcus pyogenes serotype M1 DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DA(C0):DT(D0) chainB (1078) LYS1107 0 0 0 0 0 1 5 2 (1190) GLU1219 0 0 0 0 0 0 1 0 (1304) ARG1333 0 0 0 0 0 2 13 13 (1306) ARG1335 0 0 0 0 3 12 13 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarenknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitlgeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdSptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlgg >7oxa_B: title=TARGET-BOUND SPCAS9 COMPLEX WITH AAVS1 CHIMERIC RNA-DNA GUIDE organism=Streptococcus pyogenes serotype M1 DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DA(C0):DT(D0) chainB (1068) LYS1107 0 0 0 0 0 1 6 2 (1180) GLU1219 0 0 0 0 0 0 2 0 (1286) ARG1333 0 0 0 0 0 2 11 13 (1288) ARG1335 0 0 0 0 5 14 13 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarnsrermkrieegikelsqilkehpntqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaerlseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykatakyffysnimnffkteitlgeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashydneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlgg >7oxq_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH A DOUBLE STRANDED DNA IN COMPLEX WITH FRAGMENT 048 AT THE TRANSIENT P-POCKET. organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DA(P802):DT(T726) DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DG(P822):DC(T706) chainA ( 73) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 75) LEU74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 95) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 (116) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 (152) GLN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (158) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 (184) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 (185) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 (266) ASN265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (449) ARG448 0 1 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) GLN475 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwRkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpQgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdFrElnkrtqdfwphpaglkkkkSvtvldvgdayfsvpldedfrKytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkiLepfkkqnpdiviyqymddlyvgsdlEIgqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikVrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7oxq_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH A DOUBLE STRANDED DNA IN COMPLEX WITH FRAGMENT 048 AT THE TRANSIENT P-POCKET. organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(F803):DG(E725) DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) DG(F817):DC(E711) DC(F818):DG(E710) DG(F819):DC(E709) DC(F820):DG(E708) DC(F821):DG(E707) DG(F822):DC(E706) chainC ( 91) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (180) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 (445) ARG448 0 0 0 5 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) GLN475 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiPhpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqyMddlyvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7oy7_A:DNA-glycosylase; title=CRYSTAL STRUCTURE OF A TRAPPED PAB-AGOG/DOUBLE-STANDED DNA COVALENT INTERMEDIATE (DNA CONTAINING CYTOSINE OPPOSITE TO LESION) organism=Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) DNA sequence DA(I1):DT(B9) DG(I2):DC(B8) DA(I3):DT(B7) DA(I4):DT(B6) DA(I5):DT(B5) DC(I6):PED(B4) DA(I7):DT(B3) DA(I8):DT(B2) DA(I9):DT(B1) chainA ( 55) TYR52 0 0 0 0 6 0 0 0 0 ( 56) GLN53 0 0 0 0 24 0 8 0 0 ( 96) ARG93 0 0 0 0 0 16 44 0 0 ( 97) LEU94 0 0 0 0 20 10 0 0 0 (100) GLN97 0 0 0 7 12 0 0 0 0 prot.sequence gshmiariigeigiegarfieenideqfkalrylskgidsetfvklvianslvsYQltgkgeqwwwefakyfygrdvksiylaykeflpnsrfnrRLipQklsrirrvetflstlteerieeyygdmsslwgsiaralgvdkesktvvfsvkmfgyaarivlstfnpypmeipipedsrivkltkkltnekprkfwmkiaresgvpplhidsilwpllggasidsappelrdklaelikiir >7oz2_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH A DOUBLE STRANDED DNA SHOWING A TRANSIENT P-POCKET organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(T706):DG(P822) DG(T707):DC(P821) DG(T708):DC(P820) DC(T709):DG(P819) DG(T710):DC(P818) DC(T711):DG(P817) DC(T712):DG(P816) DC(T713):DG(P815) DG(T714):DC(P814) DA(T715):DT(P813) DA(T716):DT(P812) DC(T717):DG(P811) DA(T718):DT(P810) DG(T719):DC(P809) DG(T720):DC(P808) DG(T721):DC(P807) DA(T722):DT(P806) DC(T723):DG(P805) DT(T724):DA(P804) DG(T725):DC(P803) DT(T726):DA(P802) chainA ( 62) PHE61 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ARG72 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) LEU74 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) ILE94 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) TYR115 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLN151 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) PRO157 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TYR183 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) MET184 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ASN265 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 (476) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvFackkkdstkwRkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpQgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkKdstkwrklvdFrElnkrtqdfwphpaglkkkkSvtvldvgdayfsvpldedfrKytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkiLepfkkqnpdiviyqymddlyvgsdlEIgqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikVrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwy >7oz2_C:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH A DOUBLE STRANDED DNA SHOWING A TRANSIENT P-POCKET organism=? DNA sequence DA(F802):DT(E726) DC(F803):DG(E725) DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) DG(F817):DC(E711) DC(F818):DG(E710) DG(F819):DC(E709) DC(F820):DG(E708) DC(F821):DG(E707) DG(F822):DC(E706) chainC ( 91) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (180) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 (445) ARG448 0 0 0 0 5 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) GLN475 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >7oz2_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH A DOUBLE STRANDED DNA SHOWING A TRANSIENT P-POCKET organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(E706):DG(F822) DG(E707):DC(F821) DG(E708):DC(F820) DC(E709):DG(F819) DG(E710):DC(F818) DC(E711):DG(F817) DC(E712):DG(F816) DC(E713):DG(F815) DG(E714):DC(F814) DA(E715):DT(F813) DA(E716):DT(F812) DC(E717):DG(F811) DA(E718):DT(F810) DG(E719):DC(F809) DG(E720):DC(F808) DG(E721):DC(F807) DA(E722):DT(F806) DC(E723):DG(F805) DT(E724):DA(F804) DG(E725):DC(F803) DT(E726):DA(F802) chainC ( 91) ILE94 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) TYR183 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 5 0 0 0 0 (472) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 chainD prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiPhpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqyMddlyvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7oz3_ABCD:TrkA_C-terminal_domain-like;"Winged_helix"_DNA-binding_domain; title=S. AGALACTIAE BUSR IN COMPLEX WITH ITS BUSA-PROMOTOR DNA organism=STREPTOCOCCUS AGALACTIAE DNA sequence DC(F3):DG(G44) DG(F4):DC(G43) DA(F5):DT(G42) DG(F6):DC(G41) DA(F7):DT(G40) DC(F8):DG(G39) DA(F9):DT(G38) DG(F10):DC(G37) DA(F11):DT(G36) DC(F12):DG(G35) DC(F13):DG(G34) DA(F14):DT(G33) DT(F15):DA(G32) DA(F16):DT(G31) DA(F17):DT(G30) DC(F18):DG(G29) DT(F19):DA(G28) DA(F20):DT(G27) DT(F21):DA(G26) DA(F22):DT(G25) DA(F23):DT(G24) DT(F24):DA(G23) DA(F25):DT(G22) DT(F26):DA(G21) DC(F27):DG(G20) DA(F28):DT(G19) DT(F29):DA(G18) DG(F30):DC(G17) DT(F31):DA(G16) DA(F32):DT(G15) DT(F33):DA(G14) DG(F34):DC(G13) DG(F35):DC(G12) DT(F36):DA(G11) DC(F37):DG(G10) DT(F38):DA(G9) DC(F39):DG(G8) DT(F40):DA(G7) DT(F41):DA(G6) DT(F42):DA(G5) DA(F43):DT(G4) DT(F44):DA(G3) DG(F45):DC(G2) DT(F46):DA(G1) chainA ( 31) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 9 0 0 0 0 0 0 0 0 ( 43) GLU50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 12 2 0 0 0 0 0 0 0 0 0 0 ( 44) THR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 ( 47) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) HIS69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 chainB ( 31) ARG38 0 0 0 0 0 0 11 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER48 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLU50 0 0 0 0 0 0 0 0 12 11 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR51 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG53 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) LYS54 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) HIS69 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) SER48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) PRO49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 27) THR39 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER48 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO49 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ivtskyqkiavavaqriangdyevgeklksRttiastfnvspETaRKglniladlqiltlkHgsgaiilskekaieflnqyetshsvailkgkirdnikaqqqemeelatlvddfllqtravskqyplapyeiivsedsehlgksigelnvwhqtgativaiehegkfivspgpfsvieqgdhiffvgdedvyarmktyfnl/ivtskyqkiavavaqriangdyevgeklksRttiastfnvSpETaRKglniladlqiltlkHgsgaiilskekaieflnqyetshsvailkgkirdnikaqqqemeelatlvddfllqtravskqyplapyeiivsedsehlgksigelnvwhqtgativaiehegkfivspgpfsvieqgdhiffvgdedvyarmktyfnlr/tskyqkiavavaqriangdyevgeklksrTtiastfnvSPetarkglniladlqiltlkhgsgaiilskekaieflnqyetshsvailkgkirdnikaqqqemeelatlvddfllqtravskqyplapyeiivsedsehlgksigelnvwhqtgativaiehegkfivspgpfsvieqgdhiffvgdedvyarmktyfnlr/yqkiavavaqriangdyevgeklksrTtiastfnvSPetarkglniladlqiltlkhgsgaiilskekaieflnqyetshsvailkgkirdnikaqqqemeelatlvddfllqtravskqyplapyeiivsedsehlgksigelnvwhqtgativaiehegkfivspgpfsvieqgdhiffvgdedvyarmktyfnlr >7oz3_D:TrkA_C-terminal_domain-like;"Winged_helix"_DNA-binding_domain; title=S. AGALACTIAE BUSR IN COMPLEX WITH ITS BUSA-PROMOTOR DNA organism=? DNA sequence DC(F3):DG(G44) DG(F4):DC(G43) DA(F5):DT(G42) DG(F6):DC(G41) DA(F7):DT(G40) DC(F8):DG(G39) DA(F9):DT(G38) DG(F10):DC(G37) DA(F11):DT(G36) DC(F12):DG(G35) DC(F13):DG(G34) DA(F14):DT(G33) DT(F15):DA(G32) DA(F16):DT(G31) DA(F17):DT(G30) DC(F18):DG(G29) DT(F19):DA(G28) DA(F20):DT(G27) DT(F21):DA(G26) DA(F22):DT(G25) DA(F23):DT(G24) DT(F24):DA(G23) DA(F25):DT(G22) DT(F26):DA(G21) DC(F27):DG(G20) DA(F28):DT(G19) DT(F29):DA(G18) DG(F30):DC(G17) DT(F31):DA(G16) DA(F32):DT(G15) DT(F33):DA(G14) DG(F34):DC(G13) DG(F35):DC(G12) DT(F36):DA(G11) DC(F37):DG(G10) DT(F38):DA(G9) DC(F39):DG(G8) DT(F40):DA(G7) DT(F41):DA(G6) DT(F42):DA(G5) DA(F43):DT(G4) DT(F44):DA(G3) DG(F45):DC(G2) DT(F46):DA(G1) chainD ( 27) THR39 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER48 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) PRO49 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence yqkiavavaqriangdyevgeklksrTtiastfnvSPetarkglniladlqiltlkhgsgaiilskekaieflnqyetshsvailkgkirdnikaqqqemeelatlvddfllqtravskqyplapyeiivsedsehlgksigelnvwhqtgativaiehegkfivspgpfsvieqgdhiffvgdedvyarmktyfnlr >7oz5_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH A DOUBLE STRANDED DNA IN COMPLEX WITH FRAGMENT 166 AT THE TRANSIENT P-POCKET. organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DA(P802):DT(T726) DC(P803):DG(T725) DA(P804):DT(T724) DG(P805):DC(T723) DT(P806):DA(T722) DC(P807):DG(T721) DC(P808):DG(T720) DC(P809):DG(T719) DT(P810):DA(T718) DG(P811):DC(T717) DT(P812):DA(T716) DT(P813):DA(T715) DC(P814):DG(T714) DG(P815):DC(T713) DG(P816):DC(T712) DG(P817):DC(T711) DC(P818):DG(T710) DG(P819):DC(T709) DC(P820):DG(T708) DC(P821):DG(T707) DG(P822):DC(T706) chainA ( 67) LYS66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 73) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 ( 75) LEU74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 ( 95) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 (116) TYR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 (152) GLN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (158) PRO157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 (184) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 (185) MET184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 (449) ARG448 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) GLN475 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkKdstkwRkLvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdaYfsvpldedfrkytaftipsinnetpgiryqynvlpQgwkgsPaifqssmtkilepfkkqnpdiviyqYMddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkWrklvdFrElnkrtqdfwphpaglkkkkSvtvldvgdayfsvpldedfrKytaftipsinnetpgiryqynvlpqgwkgspaifqSsmtkiLepfkkqnpdiviyqymddlyvgsdlEIgqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7oz5_CD:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH A DOUBLE STRANDED DNA IN COMPLEX WITH FRAGMENT 166 AT THE TRANSIENT P-POCKET. organism=HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 DNA sequence DC(F803):DG(E725) DA(F804):DT(E724) DG(F805):DC(E723) DT(F806):DA(E722) DC(F807):DG(E721) DC(F808):DG(E720) DC(F809):DG(E719) DT(F810):DA(E718) DG(F811):DC(E717) DT(F812):DA(E716) DT(F813):DA(E715) DC(F814):DG(E714) DG(F815):DC(E713) DG(F816):DC(E712) DG(F817):DC(E711) DC(F818):DG(E710) DG(F819):DC(E709) DC(F820):DG(E708) DC(F821):DG(E707) DG(F822):DC(E706) chainC ( 91) ILE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (180) TYR183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 (445) ARG448 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) GLN475 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfackkkdstkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanRetklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/ietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiPhpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqyMddlyvgsdleigqhrtkieelrqhllrwglwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7p0w_A:DNA-glycosylase; title=CRYSTAL STRUCTURE OF A TRAPPED PAB-AGOG/DOUBLE-STANDED DNA COVALENT INTERMEDIATE (DNA CONTAINING THYMINE OPPOSITE TO LESION) organism=Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) DNA sequence DT(B1):DA(I9) DT(B2):DA(I8) DT(B3):DA(I7) PED(B4):DT(I6) DT(B5):DA(I5) DT(B6):DA(I4) DT(B7):DA(I3) DC(B8):DG(I2) DT(B9):DA(I1) chainA ( 55) TYR52 0 0 0 0 2 0 0 0 0 ( 56) GLN53 0 0 8 0 11 0 0 0 0 ( 96) ARG93 0 0 92 9 0 0 0 0 0 ( 97) LEU94 0 0 0 6 10 0 0 0 0 (100) GLN97 0 0 0 0 6 5 0 0 0 prot.sequence gshmiariigeigiegarfieenideqfkalrylskgidsetfvklvianslvsYQltgkgeqwwwefakyfygrdvksiylaykeflpnsrfnrRLipQklsrirrvetflstlteerieeyygdmsslwgsiaralgvdkesktvvfsvkmfgyaarivlstfnpypmeipipedsrivkltkkltnekprkfwmkiaresgvpplhidsilwpllggasidsappelrdklaelikiir >7p3f_A: title=STREPTOMYCES COELICOLOR DATP/ATP-LOADED NRDR IN COMPLEX WITH ITS COGNATE DNA organism=? DNA sequence DA(R5):DT(F53) DC(R6):DG(F52) DC(R7):DG(F51) DA(R8):DT(F50) DC(R9):DG(F49) DA(R10):DT(F48) DA(R11):DT(F47) DC(R12):DG(F46) DT(R13):DA(F45) DT(R14):DA(F44) DG(R15):DC(F43) DT(R16):DA(F42) DG(R17):DC(F41) DG(R18):DC(F40) DG(R19):DC(F39) DC(R20):DG(F38) DT(R21):DA(F37) DG(R22):DC(F36) DC(R23):DG(F35) DT(R24):DA(F34) DC(R25):DG(F33) DA(R26):DT(F32) DC(R27):DG(F31) DG(R28):DC(F30) DC(R29):DG(F29) DT(R30):DA(F28) DA(R31):DT(F27) DT(R32):DA(F26) DC(R33):DG(F25) DC(R34):DG(F24) DA(R35):DT(F23) DA(R36):DT(F22) DC(R37):DG(F21) DC(R38):DG(F20) DA(R39):DT(F19) DC(R40):DG(F18) DT(R41):DA(F17) DA(R42):DT(F16) DG(R43):DC(F15) DA(R44):DT(F14) DT(R45):DA(F13) DG(R46):DC(F12) DT(R47):DA(F11) DG(R48):DC(F10) DG(R49):DC(F9) DG(R50):DC(F8) DG(R51):DC(F7) DA(R52):DT(F6) DT(R53):DA(F5) DT(R54):DA(F4) chainA ( 15) ASP15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mhcpfcrhpdsrvvDsRttddgtsirrrrqcpdcsrrfttvetcslmvvkrsgvtepfsrtkvingvrkacqgrpvtedalaqlgqrveeavratgsaeltthdvglailgplqeldlvaylrfasvyrafdsledfeaaiaelret >7p3f_ABCD: title=STREPTOMYCES COELICOLOR DATP/ATP-LOADED NRDR IN COMPLEX WITH ITS COGNATE DNA organism=? DNA sequence DA(R5):DT(F53) DC(R6):DG(F52) DC(R7):DG(F51) DA(R8):DT(F50) DC(R9):DG(F49) DA(R10):DT(F48) DA(R11):DT(F47) DC(R12):DG(F46) DT(R13):DA(F45) DT(R14):DA(F44) DG(R15):DC(F43) DT(R16):DA(F42) DG(R17):DC(F41) DG(R18):DC(F40) DG(R19):DC(F39) DC(R20):DG(F38) DT(R21):DA(F37) DG(R22):DC(F36) DC(R23):DG(F35) DT(R24):DA(F34) DC(R25):DG(F33) DA(R26):DT(F32) DC(R27):DG(F31) DG(R28):DC(F30) DC(R29):DG(F29) DT(R30):DA(F28) DA(R31):DT(F27) DT(R32):DA(F26) DC(R33):DG(F25) DC(R34):DG(F24) DA(R35):DT(F23) DA(R36):DT(F22) DC(R37):DG(F21) DC(R38):DG(F20) DA(R39):DT(F19) DC(R40):DG(F18) DT(R41):DA(F17) DA(R42):DT(F16) DG(R43):DC(F15) DA(R44):DT(F14) DT(R45):DA(F13) DG(R46):DC(F12) DT(R47):DA(F11) DG(R48):DC(F10) DG(R49):DC(F9) DG(R50):DC(F8) DG(R51):DC(F7) DA(R52):DT(F6) DT(R53):DA(F5) DT(R54):DA(F4) chainA ( 15) ASP15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 15) ASP15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 13) VAL13 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ASP15 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER16 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG17 0 0 0 0 1 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 13) VAL13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 15) ASP15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 17) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 1 0 0 0 0 prot.sequence mhcpfcrhpdsrvvDsRttddgtsirrrrqcpdcsrrfttvetcslmvvkrsgvtepfsrtkvingvrkacqgrpvtedalaqlgqrveeavratgsaeltthdvglailgplqeldlvaylrfasvyrafdsledfeaaiaelret/mhcpfcrhpdsrVvDSRttddgtsirrrrqcpdcsrrfttvetcslmvvkrsgvtepfsrtkvingvrkacqgrpvtedalaqlgqrveeavratgsaeltthdvglailgplqeldlvaylrfasvyrafdsledfeaaiaelret/mhcpfcrhpdsrvvDsRttddgtsirrrrqcpdcsrrfttvetcslmvvkrsgvtepfsrtkvingvrkacqgrpvtedalaqlgqrveeavratgsaeltthdvglailgplqeldlvaylrfasvyrafdsledfeaaiaelret/mhcpfcrhpdsrVvDsRttddgtsirrrrqcpdcsrrfttvetcslmvvkrsgvtepfsrtkvingvrkacqgrpvtedalaqlgqrveeavratgsaeltthdvglailgplqeldlvaylrfasvyrafdsledfeaaiaelret >7p5x_CDFY: title=MYCOBACTERIAL RNAP WITH TRANSCRIPTIONAL ACTIVATOR PAFBC organism=? DNA sequence DC(P84):DG(O71) DC(P85):DG(O70) DG(P86):DC(O69) DA(P87):DT(O68) DT(P88):DA(O67) DC(P89):DG(O66) DG(P90):DC(O65) DG(P91):DC(O64) DT(P92):DA(O63) DA(P93):DA(O62) DC(P94):DC(O61) DC(P95):DC(O60) DG(P96):DG(O59) DG(P97):DG(O58) DA(P98):DC(O57) DC(P99):DA(O56) DA(P100):DC(O55) DT(P101):DT(O54) DG(P102):DG(O53) DT(P103):DC(O52) DA(P104):DA(O51) DA(P105):DA(O50) DA(P106):DT(O49) DG(P107):DC(O48) DA(P108):DT(O47) DG(P109):DC(O46) DC(P110):DG(O45) DA(P111):DT(O44) DG(P112):DC(O43) DA(P113):DT(O42) DC(P114):DG(O41) DC(P115):DG(O40) DA(P116):DT(O39) DC(P117):DG(O38) DC(P118):DG(O37) DG(P119):DC(O36) DA(P120):DT(O35) DC(P121):DG(O34) DA(P122):DT(O33) DA(P123):DT(O32) DG(P124):DC(O31) DT(P125):DA(O30) chainC (152) ARG172 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP202 0 0 0 0 0 0 0 0 0 4 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP218 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG219 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) THR397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) LYS419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU454 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) GLU457 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG458 0 0 0 0 0 0 0 0 28 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1033) GLN1053 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (330) LEU330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) ASP331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) ARG334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (427) ARG427 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) ALA501 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) PRO502 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (866) THR866 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (867) ALA867 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 17) ASP164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) VAL166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ARG167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) LEU178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLU184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ASN237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) LEU240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ARG247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) TYR248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ARG251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) PHE255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) PHE273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) ASP274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) LYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) TYR279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) THR283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) TYR284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) THR286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) TRP287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) TRP288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) ARG290 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) GLN291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ARG295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) HIS309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) GLU312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ILE314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ASN315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) ILE359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) ILE365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) GLU368 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) ASP370 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) SER371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) LEU373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) PHE376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainY ( 44) ARG46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 9 3 0 0 0 0 0 ( 47) GLU49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 ( 48) ARG50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 11 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewlvgsdrwrqaaidrgeenpvggleevlaelspiedfsgsmslsfsdprfdevkasvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstektlhsvkvipgrgaWlefdvdkrdtvgvriDRkrrqpvtvllkalgwtneqiverfgfseimmgtlekdttsgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglnagkpitsstlteedvvatieylvrlhegqtsmtvpggvevpvevddidhfgnrrlrtvgeliqnqirvglsrmervvrErmtTqdveaitpqtliniRpvvaaiKEffgtsqlsqfmdqnnplsglthkrrlsalgpggLsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvengvvtdqidyltadeedrhvvaqansptdengrftedrvmvrkkggevefvsadqvdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvadktgvieevsadyitvmaddgtrqsyrlrkfarsnhgtcanqrpivdagqrveagqviadgpctqngemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnvsdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsredddelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpflpdgtpvdiilnthgvprrmnigqilethlgwvakagwnidvaagvpdwasklpeelysapadstvatpvfdgaqegelagllgstlpnrdgevmvdadgkstlfdgrsgepfpypvtvgymyilklhhlvddkiharstgpysmitqqplggkaQfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaiemrdg/mldvnffdelriglataddirnwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvddemrhnelstleaemavekkavedqrdadlearaqkleadlaeleaegaksdvrrkvrdsgeremrqlrdraqreldrldeiwntftklapkqlivdevlyrelqdrygeyftgamgaesikklienfdidaeaeslrevirsgkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLDggRfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepqlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgkplamprldmvtglyylttlvegatgeyqaatkdapeqgvysspaeaimamdrgalsvrakikvrltelrpptdleaqlfengwkpgdawtaettlgrvmfnellpksypfvneqmhkkvqariindlaerfpmivvaqtvdklkdagfywatrsgvtvsmadvlvppqkqeilerheaeadaierkyqrgalnhterneslvkiwqdateevgkaleefypadnpiitivksgatgnltqtrtlagmkglvtnpkgefiprpikssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdceterginvtlaergpdgtlirdahvetsafartlatdavdangnviierghdlgdpaidallaagittvkvrsvltctsatgvcamcygrsmatgklvdigeavgivaaqsigepgtqltmrvgglprvqelfearvprnkapiadvagrvrleesdkffkitivpddggeevvydklskrqrlrvithgvlsdgdhvevgdqlmegaadphevlrvqgprevqihlvkevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslteraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtgisryrniqvqpteearaaa/ealrqarkdaeltasaDsVRayLkqigkvaLlnaeeEvelakrieaglyatqklaelaekgeklpvqqrrdmqwicrdgdraknhlleaNlRLvvslakRYtgRgmaFldliqegnlgliravekFDytKgYkfSTYaTWWiRQaitRamadqartiripvHmvEvINklgriqrellqdlgreptpeelakemditpekvleiqqyarepIsldqtIgdEgDSqLgdFiedseavvavdavsftllqdqlqsvletlsereagvvrlrfgltdgqprtldeigqvygvtrerirqiesktmsklrhpsrsqvlrdyl/vskverlmnlviallstrtylpaekirttvagyadspsdeafsRmfERdknelrdlgipletgrvskwdstegyrinrdsyalppigltadeaaavavatqlwqspelvtatqnavlklraagv >7p5x_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIAL RNAP WITH TRANSCRIPTIONAL ACTIVATOR PAFBC organism=? DNA sequence DA(O30):DT(P125) DC(O31):DG(P124) DT(O32):DA(P123) DT(O33):DA(P122) DG(O34):DC(P121) DT(O35):DA(P120) DC(O36):DG(P119) DG(O37):DC(P118) DG(O38):DC(P117) DT(O39):DA(P116) DG(O40):DC(P115) DG(O41):DC(P114) DT(O42):DA(P113) DC(O43):DG(P112) DT(O44):DA(P111) DG(O45):DC(P110) DC(O46):DG(P109) DT(O47):DA(P108) DC(O48):DG(P107) DT(O49):DA(P106) DA(O50):DA(P105) DA(O51):DA(P104) DC(O52):DT(P103) DG(O53):DG(P102) DT(O54):DT(P101) DC(O55):DA(P100) DA(O56):DC(P99) DC(O57):DA(P98) DG(O58):DG(P97) DG(O59):DG(P96) DC(O60):DC(P95) DC(O61):DC(P94) DA(O62):DA(P93) DA(O63):DT(P92) DC(O64):DG(P91) DC(O65):DG(P90) DG(O66):DC(P89) DA(O67):DT(P88) DT(O68):DA(P87) DC(O69):DG(P86) DG(O70):DC(P85) DG(O71):DC(P84) chainD (330) LEU330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) ASP331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) ARG334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (427) ARG427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (501) ALA501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (502) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (866) THR866 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (867) ALA867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence mldvnffdelriglataddirnwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvddemrhnelstleaemavekkavedqrdadlearaqkleadlaeleaegaksdvrrkvrdsgeremrqlrdraqreldrldeiwntftklapkqlivdevlyrelqdrygeyftgamgaesikklienfdidaeaeslrevirsgkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLDggRfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepqlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgkplamprldmvtglyylttlvegatgeyqaatkdapeqgvysspaeaimamdrgalsvrakikvrltelrpptdleaqlfengwkpgdawtaettlgrvmfnellpksypfvneqmhkkvqariindlaerfpmivvaqtvdklkdagfywatrsgvtvsmadvlvppqkqeilerheaeadaierkyqrgalnhterneslvkiwqdateevgkaleefypadnpiitivksgatgnltqtrtlagmkglvtnpkgefiprpikssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdceterginvtlaergpdgtlirdahvetsafartlatdavdangnviierghdlgdpaidallaagittvkvrsvltctsatgvcamcygrsmatgklvdigeavgivaaqsigepgtqltmrvgglprvqelfearvprnkapiadvagrvrleesdkffkitivpddggeevvydklskrqrlrvithgvlsdgdhvevgdqlmegaadphevlrvqgprevqihlvkevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslteraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtgisryrniqvqpteearaaa >7p8l_A:DNA-glycosylase; title=CRYSTAL STRUCTURE OF PYROCOCCUS ABYSSI 8-OXOGUANINE DNA GLYCOSYLASE (PABAGOG) IN COMPLEX WITH DSDNA CONTAINING CYTOSINE OPPOSITE TO 8- OXOG organism=Pyrococcus abyssi (strain GE5 / Orsay) / Pyrococcus abyssi (strain GE5 / Orsay) DNA sequence DA(I1):DT(B9) DG(I2):DC(B8) DA(I3):DT(B7) DA(I4):DT(B6) DA(I5):DT(B5) DC(I6):DT(B3) DA(I7):DT(B2) DA(I8):DT(B1) chainA ( 55) TYR52 0 0 0 0 4 0 0 0 ( 56) GLN53 0 0 0 0 26 0 0 0 ( 58) THR55 0 0 0 0 0 2 0 0 ( 60) LYS57 0 0 0 0 0 3 0 0 ( 63) GLN60 0 0 0 0 0 1 0 0 ( 96) ARG93 0 0 0 0 0 15 33 0 ( 97) LEU94 0 0 0 0 11 10 0 0 prot.sequence gshmiariigeigiegarfieenideqfkalrylskgidsetfvklvianslvsYQlTgKgeQwwwefakyfygrdvksiylaykeflpnsrfnrRLipqklsrirrvetflstlteerieeyygdmsslwgsiaralgvdkesqtvvfsvkmfgyaarivlstfnpypmeipipedsrivkltkkltnekprkfwmkiaresgvpplhidsilwpllggasidsappelrdklaelikiir >7p8v_A:ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase;Ribosomal_protein_S5_domain_2-like; title=THE STRUCTURE OF E. COLI MUTL BOUND TO A 3' RESECTED DNA END organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DT(D26):DA(C23) DC(D27):DG(C22) DA(D28):DT(C21) DG(D29):DC(C20) DC(D30):DG(C19) DT(D31):DA(C18) DT(D32):DA(C17) DA(D33):DT(C16) DG(D34):DC(C15) DC(D35):DG(C14) DT(D36):DA(C13) DT(D37):DA(C12) DA(D38):DT(C11) chainA (316) ARG316 0 0 0 0 0 0 0 0 0 0 0 1 9 (320) ASP320 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence mpiqvlppqlanqiaagevverpasvvkelvensldagatrididierggaklirirdngcgikkdelalalarhatskiaslddleaiislgfrgealasissvsrltltsrtaeqqeawqayaegrdmnvtvkpaahpvgttlevldlfyntparrkflrtektefnhideiirrialarfdvtinlshngkivrqyravpeggqkerrlgaicgtafleqalaiewqhgdltlrgwvadpnhttpalaeiqycyvngrmmrdrlinhairqacedklgadqqpafvlyleidphqvdvnvhpakhevrfhqsRlvhDfiyqgvlsvlq >7p8v_AB:ATPase_domain_of_HSP90_chaperone/DNA_topoisomerase_II/histidine_kinase;Ribosomal_protein_S5_domain_2-like; title=THE STRUCTURE OF E. COLI MUTL BOUND TO A 3' RESECTED DNA END organism=Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) DNA sequence DT(C11):DA(D38) DA(C12):DT(D37) DA(C13):DT(D36) DG(C14):DC(D35) DC(C15):DG(D34) DT(C16):DA(D33) DA(C17):DT(D32) DA(C18):DT(D31) DG(C19):DC(D30) DC(C20):DG(D29) DT(C21):DA(D28) DG(C22):DC(D27) DA(C23):DT(D26) chainA (316) ARG316 9 1 0 0 0 0 0 0 0 0 0 0 0 (320) ASP320 3 0 0 0 0 0 0 0 0 0 0 0 0 chainB (165) LYS165 0 0 0 1 4 0 0 0 0 0 0 0 0 prot.sequence mpiqvlppqlanqiaagevverpasvvkelvensldagatrididierggaklirirdngcgikkdelalalarhatskiaslddleaiislgfrgealasissvsrltltsrtaeqqeawqayaegrdmnvtvkpaahpvgttlevldlfyntparrkflrtektefnhideiirrialarfdvtinlshngkivrqyravpeggqkerrlgaicgtafleqalaiewqhgdltlrgwvadpnhttpalaeiqycyvngrmmrdrlinhairqacedklgadqqpafvlyleidphqvdvnvhpakhevrfhqsRlvhDfiyqgvlsvlq/mpiqvlppqlanqiaagevverpasvvkelvensldagatrididierggaklirirdngcgikkdelalalarhatskiaslddleaiislgfrgealasissvsrltltsrtaeqqeawqayaegrdmnvtvkpaahpvgttlevldlfyntparrkflrteKtefnhideiirrialarfdvtinlshngkivrqyravpeggqkerrlgaicgtafleqalaiewqhgdltlrgwvadpnhttpalaeiqycyvngrmmrdrlinhairqacedklgadqqpafvlyleidphqvdvnvhpakhevrfhqsrlvhdfiyqgvlsvlq >7p9z_A:DNA-glycosylase; title=CRYSTAL STRUCTURE OF A TRAPPED PAB-AGOG/DOUBLE-STANDED DNA COVALENT INTERMEDIATE (DNA CONTAINING ADENINE OPPOSITE TO LESION) organism=Pyrococcus abyssi DNA sequence DA(I1):DT(B9) DG(I2):DC(B8) DA(I3):DT(B7) DA(I4):DT(B6) DA(I5):DT(B5) DA(I6):DT(B3) DA(I7):DT(B2) DA(I8):DT(B1) chainA ( 55) TYR52 0 0 0 0 2 0 0 0 ( 56) GLN53 0 0 0 0 24 30 0 0 ( 96) ARG93 0 0 0 0 0 15 12 0 ( 97) LEU94 0 0 0 0 9 16 0 0 (100) GLN97 0 0 0 6 7 0 0 0 prot.sequence gshmiariigeigiegarfieenideqfkalrylskgidsetfvklvianslvsYQltgkgeqwwwefakyfygrdvksiylaykeflpnsrfnrRLipQklsrirrvetflstlteerieeyygdmsslwgsiaralgvdkesktvvfsvkmfgyaarivlstfnpypmeipipedsrivkltkkltnekprkfwmkiaresgvpplhidsilwpllggasidsappelrdklaelikiir >7pbl_ABCD:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S1 [T2 DATASET] organism=? DNA sequence DC(V2):DG(U15) DT(V3):DA(U14) DT(V4):DA(U13) DC(V5):DG(U12) DC(V6):DG(U11) DT(V7):DA(U10) DC(V8):DG(U9) DG(V9):DC(U8) DA(V10):DT(U7) DA(V11):DT(U6) DG(V12):DC(U5) DG(V13):DC(U4) DT(V14):DA(U3) DT(V15):DA(U2) DC(V16):DG(U1) chainA chainB (294) ARG312 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 chainC (290) ARG312 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 chainD (294) ARG312 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtrtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimitsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr >7pbl_C:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S1 [T2 DATASET] organism=? DNA sequence DC(V2):DG(U15) DT(V3):DA(U14) DT(V4):DA(U13) DC(V5):DG(U12) DC(V6):DG(U11) DT(V7):DA(U10) DC(V8):DG(U9) DG(V9):DC(U8) DA(V10):DT(U7) DA(V11):DT(U6) DG(V12):DC(U5) DG(V13):DC(U4) DT(V14):DA(U3) DT(V15):DA(U2) DC(V16):DG(U1) chainC (290) ARG312 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimitsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr >7pbm_ABCD:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S2 [T2 DATASET] organism=? DNA sequence DC(V2):DG(U15) DT(V3):DA(U14) DT(V4):DA(U13) DC(V5):DG(U12) DC(V6):DG(U11) DT(V7):DA(U10) DC(V8):DG(U9) DG(V9):DC(U8) DA(V10):DT(U7) DA(V11):DT(U6) DG(V12):DC(U5) DG(V13):DC(U4) DT(V14):DA(U3) DT(V15):DA(U2) DC(V16):DG(U1) chainA chainB (294) ARG312 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainC (290) ARG312 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 chainD prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtrtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimitsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfImrtrtgrvatakayehmgydytr >7pbm_B:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S2 [T2 DATASET] organism=? DNA sequence DG(U1):DC(V16) DA(U2):DT(V15) DA(U3):DT(V14) DC(U4):DG(V13) DC(U5):DG(V12) DT(U6):DA(V11) DT(U7):DA(V10) DC(U8):DG(V9) DG(U9):DC(V8) DA(U10):DT(V7) DG(U11):DC(V6) DG(U12):DC(V5) DA(U13):DT(V4) DA(U14):DT(V3) DG(U15):DC(V2) chainB (294) ARG312 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt >7pbn_ABCD:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S3 [T2 DATASET] organism=? DNA sequence DC(V2):DG(U15) DT(V3):DA(U14) DT(V4):DA(U13) DC(V5):DG(U12) DC(V6):DG(U11) DT(V7):DA(U10) DC(V8):DG(U9) DG(V9):DC(U8) DA(V10):DT(U7) DA(V11):DT(U6) DG(V12):DC(U5) DG(V13):DC(U4) DT(V14):DA(U3) DT(V15):DA(U2) DC(V16):DG(U1) chainA chainB (294) ARG312 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainC (290) ARG312 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 chainD prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtrtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimitsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfImrtrtgrvatakayehmgydytr >7pbo_ABCD:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S4 [T2 DATASET] organism=? DNA sequence DG(U1):DC(V16) DA(U2):DT(V15) DA(U3):DT(V14) DC(U4):DG(V13) DC(U5):DG(V12) DT(U6):DA(V11) DT(U7):DA(V10) DC(U8):DG(V9) DG(U9):DC(V8) DA(U10):DT(V7) DG(U11):DC(V6) DG(U12):DC(V5) DA(U13):DT(V4) DA(U14):DT(V3) DG(U15):DC(V2) chainA chainB (294) ARG312 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 chainC (290) ARG312 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 chainD (294) ARG312 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtrtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimitsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr >7pbo_D:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S4 [T2 DATASET] organism=? DNA sequence DC(V2):DG(U15) DT(V3):DA(U14) DT(V4):DA(U13) DC(V5):DG(U12) DC(V6):DG(U11) DT(V7):DA(U10) DC(V8):DG(U9) DG(V9):DC(U8) DA(V10):DT(U7) DA(V11):DT(U6) DG(V12):DC(U5) DG(V13):DC(U4) DT(V14):DA(U3) DT(V15):DA(U2) DC(V16):DG(U1) chainD (294) ARG312 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr >7pbp_ABCD:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S5 [T2 DATASET] organism=? DNA sequence DC(V2):DG(U15) DT(V3):DA(U14) DT(V4):DA(U13) DC(V5):DG(U12) DC(V6):DG(U11) DT(V7):DA(U10) DC(V8):DG(U9) DG(V9):DC(U8) DA(V10):DT(U7) DA(V11):DT(U6) DG(V12):DC(U5) DG(V13):DC(U4) DT(V14):DA(U3) DT(V15):DA(U2) DC(V16):DG(U1) chainA chainB chainC (290) ARG312 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 chainD prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtrtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtrtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimitsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfImrtrtgrvatakayehmgydytr >7pbq_ABCDF:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S0+A [T2 DATASET] organism=? DNA sequence DG(U1):DC(V16) DA(U2):DT(V15) DA(U3):DT(V14) DC(U4):DG(V13) DC(U5):DG(V12) DT(U6):DA(V11) DT(U7):DA(V10) DC(U8):DG(V9) DG(U9):DC(V8) DA(U10):DT(V7) DG(U11):DC(V6) DG(U12):DC(V5) DA(U13):DT(V4) DA(U14):DT(V3) DG(U15):DC(V2) chainA (294) ARG312 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainB (294) ARG312 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 chainC (290) ARG312 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 chainD chainF (294) ARG312 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimitsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfImrtrtgrvatakayehmgydytr/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt >7pbq_C:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S0+A [T2 DATASET] organism=? DNA sequence DG(U1):DC(V16) DA(U2):DT(V15) DA(U3):DT(V14) DC(U4):DG(V13) DC(U5):DG(V12) DT(U6):DA(V11) DT(U7):DA(V10) DC(U8):DG(V9) DG(U9):DC(V8) DA(U10):DT(V7) DG(U11):DC(V6) DG(U12):DC(V5) DA(U13):DT(V4) DA(U14):DT(V3) DG(U15):DC(V2) chainC (290) ARG312 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimitsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr >7pbr_ABCD:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S0-A [T2 DATASET] organism=? DNA sequence DG(U1):DC(V16) DA(U2):DT(V15) DA(U3):DT(V14) DC(U4):DG(V13) DC(U5):DG(V12) DT(U6):DA(V11) DT(U7):DA(V10) DC(U8):DG(V9) DG(U9):DC(V8) DA(U10):DT(V7) DG(U11):DC(V6) DG(U12):DC(V5) DA(U13):DT(V4) DA(U14):DT(V3) DG(U15):DC(V2) chainA (294) ARG312 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainB (294) ARG312 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 chainC (290) ARG312 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 chainD prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimitsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfImrtrtgrvatakayehmgydytr >7pbr_C:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S0-A [T2 DATASET] organism=? DNA sequence DC(V2):DG(U15) DT(V3):DA(U14) DT(V4):DA(U13) DC(V5):DG(U12) DC(V6):DG(U11) DT(V7):DA(U10) DC(V8):DG(U9) DG(V9):DC(U8) DA(V10):DT(U7) DA(V11):DT(U6) DG(V12):DC(U5) DG(V13):DC(U4) DT(V14):DA(U3) DT(V15):DA(U2) DC(V16):DG(U1) chainC (290) ARG312 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimitsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr >7pbs_ABCDF:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S0+A [T1 DATASET] organism=? DNA sequence DG(U1):DC(V16) DA(U2):DT(V15) DA(U3):DT(V14) DC(U4):DG(V13) DC(U5):DG(V12) DT(U6):DA(V11) DT(U7):DA(V10) DC(U8):DG(V9) DG(U9):DC(V8) DA(U10):DT(V7) DG(U11):DC(V6) DG(U12):DC(V5) DA(U13):DT(V4) DA(U14):DT(V3) DG(U15):DC(V2) chainA (294) ARG312 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainB (294) ARG312 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainC (290) ARG312 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 chainD (294) ARG312 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainF prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimitsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt >7pbs_C:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S0+A [T1 DATASET] organism=? DNA sequence DC(V2):DG(U15) DT(V3):DA(U14) DT(V4):DA(U13) DC(V5):DG(U12) DC(V6):DG(U11) DT(V7):DA(U10) DC(V8):DG(U9) DG(V9):DC(U8) DA(V10):DT(U7) DA(V11):DT(U6) DG(V12):DC(U5) DG(V13):DC(U4) DT(V14):DA(U3) DT(V15):DA(U2) DC(V16):DG(U1) chainC (290) ARG312 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimitsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr >7pbt_ABCD:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S1 [T1 DATASET] organism=? DNA sequence DG(U1):DC(V16) DA(U2):DT(V15) DA(U3):DT(V14) DC(U4):DG(V13) DC(U5):DG(V12) DT(U6):DA(V11) DT(U7):DA(V10) DC(U8):DG(V9) DG(U9):DC(V8) DA(U10):DT(V7) DG(U11):DC(V6) DG(U12):DC(V5) DA(U13):DT(V4) DA(U14):DT(V3) DG(U15):DC(V2) chainA chainB (294) ARG312 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainC (290) ARG312 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 chainD (294) ARG312 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtrtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimitsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr/tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydytr >7pbt_B:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=RUVAB BRANCH MIGRATION MOTOR COMPLEXED TO THE HOLLIDAY JUNCTION - RUVB AAA+ STATE S1 [T1 DATASET] organism=? DNA sequence DC(V2):DG(U15) DT(V3):DA(U14) DT(V4):DA(U13) DC(V5):DG(U12) DC(V6):DG(U11) DT(V7):DA(U10) DC(V8):DG(U9) DG(V9):DC(U8) DA(V10):DT(U7) DA(V11):DT(U6) DG(V12):DC(U5) DG(V13):DC(U4) DT(V14):DA(U3) DT(V15):DA(U2) DC(V16):DG(U1) chainB (294) ARG312 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence tlrpqyfkeyigqdkvkdqlkifieaaklrdealdhtllfgppglgkttmafvianemgvnlkqtsgpaiekagdlvailndlepgdilfideihrmpmaveevlysamedyyidimigagetsrsvhldlppftlvgattragmlsnplrarfginghmeyyelpdlteivertseifemtitpeaalelarrsrgtprianrllkrvrdyaqimgdgviddkiadqaltmldvdhegldyvdqkilrtmiemygggpvglgtlsvniaeeretvedmyepyliqkgfimrtRtgrvatakayehmgydyt >7pel_AE:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=CRYOEM STRUCTURE OF SIMIAN T-CELL LYMPHOTROPIC VIRUS INTASOME IN COMPLEX WITH PP2A REGULATORY SUBUNIT B56 GAMMA organism=? DNA sequence DG(N2):DC(M21) DA(N3):DT(M20) DA(N5):DT(M18) DG(N6):DC(M17) DA(N7):DT(M16) DA(N8):DT(M15) DG(N9):DC(M14) DC(N10):DG(M13) DG(N11):DC(M12) DC(N12):DG(M11) DC(N13):DG(M10) DA(N14):DT(M9) DA(N15):DT(M8) DA(N16):DT(M7) DC(N17):DG(M6) DA(N18):DT(M5) DC(N19):DG(M4) chainA (218) ARG240 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 chainE (150) THR152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (156) GLU158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (157) ARG159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 6 0 (196) THR198 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 (197) HIS199 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence spaklhsfthcgqaaltlhgatttealnilhschacrirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipvertngilktllykyfsdnpnlpmdnalsvalwtinhlnvlthcqktrwqlhhsprlppipeakpvttskthwyyfkipglnsRqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr/spaklhsfthcgqaaltlhgatttealnilhschacrknnpqhqmprghirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipynpTssglvERtngilktllykyfsdnpnlpmdnalsvalwtinhlnvlTHcqktrwqlhhsprlppipeakpvttskthwyyfkipglnsrqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr >7pel_BD:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=CRYOEM STRUCTURE OF SIMIAN T-CELL LYMPHOTROPIC VIRUS INTASOME IN COMPLEX WITH PP2A REGULATORY SUBUNIT B56 GAMMA organism=? DNA sequence DT(K3):DA(L20) DG(K4):DC(L19) DT(K5):DA(L18) DG(K6):DC(L17) DT(K7):DA(L16) DT(K8):DA(L15) DT(K9):DA(L14) DG(K10):DC(L13) DG(K11):DC(L12) DC(K12):DG(L11) DG(K13):DC(L10) DC(K14):DG(L9) DT(K15):DA(L8) DT(K16):DA(L7) DC(K17):DG(L6) DT(K18):DA(L5) DC(K19):DG(L4) DT(K20):DA(L3) DC(K21):DG(L2) chainB ( 51) ARG53 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) PRO151 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) THR152 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) GLU158 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) ARG159 0 0 6 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) THR198 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) HIS199 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) ALA253 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (218) ARG240 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spaklhsfthcgqaaltlhgatttealnilhschacrknnpqhqmprghiRrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipynPTssglvERtngilktllykyfsdnpnlpmdnalsvalwtinhlnvlTHcqktrwqlhhsprlppipeakpvttskthwyyfkipglnsrqwkgpqralqeaAgaalipvsdtaaqwipwkllkravcpr/spaklhsfthcgqaaltlhgatttealnilhschacrirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipvertngilktllykyfsdnpnlpmdnalsvalwtinhlnvlthcqktrwqlhhsprlppipeakpvttskthwyyfkipglnsRqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr >7pel_D:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase; title=CRYOEM STRUCTURE OF SIMIAN T-CELL LYMPHOTROPIC VIRUS INTASOME IN COMPLEX WITH PP2A REGULATORY SUBUNIT B56 GAMMA organism=? DNA sequence DT(K3):DA(L20) DG(K4):DC(L19) DT(K5):DA(L18) DG(K6):DC(L17) DT(K7):DA(L16) DT(K8):DA(L15) DT(K9):DA(L14) DG(K10):DC(L13) DG(K11):DC(L12) DC(K12):DG(L11) DG(K13):DC(L10) DC(K14):DG(L9) DT(K15):DA(L8) DT(K16):DA(L7) DC(K17):DG(L6) DT(K18):DA(L5) DC(K19):DG(L4) DT(K20):DA(L3) DC(K21):DG(L2) chainD (218) ARG240 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spaklhsfthcgqaaltlhgatttealnilhschacrirrgllpnhiwqgdithfkykntlyrlhvwvdtfsgsvsathkkretsseaissllhaiahlgrpshintdngpayasqefqhactslairhtthipvertngilktllykyfsdnpnlpmdnalsvalwtinhlnvlthcqktrwqlhhsprlppipeakpvttskthwyyfkipglnsRqwkgpqralqeaagaalipvsdtaaqwipwkllkravcpr >7peu_Q:Histone-fold; title=TRINUCLEOSOME OF THE 4X177 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DG(J181):DC(I522) DG(J182):DC(I521) DC(J183):DG(I520) DA(J184):DT(I519) DC(J185):DG(I518) DT(J186):DA(I517) DG(J187):DC(I516) DG(J188):DC(I515) DA(J189):DT(I514) DA(J190):DT(I513) DC(J191):DG(I512) DA(J192):DT(I511) DG(J193):DC(I510) DG(J194):DC(I509) DA(J195):DT(I508) DT(J196):DA(I507) DG(J197):DC(I506) DT(J198):DA(I505) DA(J199):DT(I504) DT(J200):DA(I503) DA(J201):DT(I502) DT(J202):DA(I501) DA(J203):DT(I500) DT(J204):DA(I499) DG(J205):DC(I498) DT(J206):DA(I497) DG(J207):DC(I496) DA(J208):DT(I495) DC(J209):DG(I494) DA(J210):DT(I493) DC(J211):DG(I492) DG(J212):DC(I491) DT(J213):DA(I490) DG(J214):DC(I489) DC(J215):DG(I488) DC(J216):DG(I487) DT(J217):DA(I486) DG(J218):DC(I485) DG(J219):DC(I484) DA(J220):DT(I483) DG(J221):DC(I482) DA(J222):DT(I481) DC(J223):DG(I480) DT(J224):DA(I479) DA(J225):DT(I478) DG(J226):DC(I477) DG(J227):DC(I476) DG(J228):DC(I475) DA(J229):DT(I474) DG(J230):DC(I473) DT(J231):DA(I472) DA(J232):DT(I471) DA(J233):DT(I470) DT(J234):DA(I469) DC(J235):DG(I468) DC(J236):DG(I467) DC(J237):DG(I466) DC(J238):DG(I465) DT(J239):DA(I464) DT(J240):DA(I463) DG(J241):DC(I462) DG(J242):DC(I461) DC(J243):DG(I460) DG(J244):DC(I459) DG(J245):DC(I458) DT(J246):DA(I457) DT(J247):DA(I456) DA(J248):DT(I455) DA(J249):DT(I454) DA(J250):DT(I453) DA(J251):DT(I452) DC(J252):DG(I451) DG(J253):DC(I450) DC(J254):DG(I449) DG(J255):DC(I448) DG(J256):DC(I447) DG(J257):DC(I446) DG(J258):DC(I445) DG(J259):DC(I444) DA(J260):DT(I443) DC(J261):DG(I442) DA(J262):DT(I441) DG(J263):DC(I440) DC(J264):DG(I439) DG(J265):DC(I438) DC(J266):DG(I437) DG(J267):DC(I436) DT(J268):DA(I435) DA(J269):DT(I434) DC(J270):DG(I433) DG(J271):DC(I432) DT(J272):DA(I431) DG(J273):DC(I430) DC(J274):DG(I429) DG(J275):DC(I428) DT(J276):DA(I427) DT(J277):DA(I426) DT(J278):DA(I425) DA(J279):DT(I424) DA(J280):DT(I423) DG(J281):DC(I422) DC(J282):DG(I421) DG(J283):DC(I420) DG(J284):DC(I419) DT(J285):DA(I418) DG(J286):DC(I417) DC(J287):DG(I416) DT(J288):DA(I415) DA(J289):DT(I414) DG(J290):DC(I413) DA(J291):DT(I412) DG(J292):DC(I411) DC(J293):DG(I410) DT(J294):DA(I409) DG(J295):DC(I408) DT(J296):DA(I407) DC(J297):DG(I406) DT(J298):DA(I405) DA(J299):DT(I404) DC(J300):DG(I403) DG(J301):DC(I402) DA(J302):DT(I401) DC(J303):DG(I400) DC(J304):DG(I399) DA(J305):DT(I398) DA(J306):DT(I397) DT(J307):DA(I396) DT(J308):DA(I395) DG(J309):DC(I394) DA(J310):DT(I393) DG(J311):DC(I392) DC(J312):DG(I391) DG(J313):DC(I390) DG(J314):DC(I389) DC(J315):DG(I388) DC(J316):DG(I387) DT(J317):DA(I386) DC(J318):DG(I385) DG(J319):DC(I384) DG(J320):DC(I383) DC(J321):DG(I382) DA(J322):DT(I381) DC(J323):DG(I380) DC(J324):DG(I379) DG(J325):DC(I378) DG(J326):DC(I377) DG(J327):DC(I376) DA(J328):DT(I375) DT(J329):DA(I374) DT(J330):DA(I373) DC(J331):DG(I372) DT(J332):DA(I371) DC(J333):DG(I370) DC(J334):DG(I369) DA(J335):DT(I368) DG(J336):DC(I367) DG(J337):DC(I366) DG(J338):DC(I365) DG(J339):DC(I364) DA(J340):DT(I363) DT(J341):DA(I362) DG(J342):DC(I361) DT(J343):DA(I360) DG(J344):DC(I359) DG(J345):DC(I358) DA(J346):DT(I357) DT(J347):DA(I356) DC(J349):DG(I354) DT(J350):DA(I353) DC(J351):DG(I352) DG(J352):DC(I351) DG(J353):DC(I350) DG(J354):DC(I349) DT(J355):DA(I348) DC(J356):DG(I347) DC(J357):DG(I346) DG(J358):DC(I345) DG(J359):DC(I344) DA(J361):DT(I342) DC(J362):DG(I341) DT(J363):DA(I340) DG(J364):DC(I339) DG(J365):DC(I338) DA(J366):DT(I337) DA(J367):DT(I336) DC(J368):DG(I335) DA(J369):DT(I334) DG(J370):DC(I333) DG(J371):DC(I332) DA(J372):DT(I331) DT(J373):DA(I330) DG(J374):DC(I329) DT(J375):DA(I328) DA(J376):DT(I327) DT(J377):DA(I326) DA(J378):DT(I325) DT(J379):DA(I324) DA(J380):DT(I323) DT(J381):DA(I322) DG(J382):DC(I321) DT(J383):DA(I320) DG(J384):DC(I319) DA(J385):DT(I318) DC(J386):DG(I317) DA(J387):DT(I316) DC(J388):DG(I315) DG(J389):DC(I314) DT(J390):DA(I313) DG(J391):DC(I312) DC(J392):DG(I311) DC(J393):DG(I310) DT(J394):DA(I309) DG(J395):DC(I308) DG(J396):DC(I307) DA(J397):DT(I306) DG(J398):DC(I305) DA(J399):DT(I304) DC(J400):DG(I303) DT(J401):DA(I302) DA(J402):DT(I301) DG(J403):DC(I300) DG(J404):DC(I299) DG(J405):DC(I298) DA(J406):DT(I297) DG(J407):DC(I296) DT(J408):DA(I295) DA(J409):DT(I294) DA(J410):DT(I293) DT(J411):DA(I292) DC(J412):DG(I291) DC(J413):DG(I290) DC(J414):DG(I289) DC(J415):DG(I288) DT(J416):DA(I287) DT(J417):DA(I286) DG(J418):DC(I285) DG(J419):DC(I284) DC(J420):DG(I283) DG(J421):DC(I282) DG(J422):DC(I281) DT(J423):DA(I280) DT(J424):DA(I279) DA(J425):DT(I278) DA(J426):DT(I277) DA(J427):DT(I276) DA(J428):DT(I275) DC(J429):DG(I274) DG(J430):DC(I273) DC(J431):DG(I272) DG(J432):DC(I271) DG(J433):DC(I270) DG(J434):DC(I269) DG(J435):DC(I268) DG(J436):DC(I267) DA(J437):DT(I266) DC(J438):DG(I265) DA(J439):DT(I264) DG(J440):DC(I263) DC(J441):DG(I262) DG(J442):DC(I261) DC(J443):DG(I260) DG(J444):DC(I259) DT(J445):DA(I258) DA(J446):DT(I257) DC(J447):DG(I256) DG(J448):DC(I255) DT(J449):DA(I254) DG(J450):DC(I253) DC(J451):DG(I252) DG(J452):DC(I251) DT(J453):DA(I250) DT(J454):DA(I249) DT(J455):DA(I248) DA(J456):DT(I247) DA(J457):DT(I246) DG(J458):DC(I245) DC(J459):DG(I244) DG(J460):DC(I243) DG(J461):DC(I242) DT(J462):DA(I241) DG(J463):DC(I240) DC(J464):DG(I239) DT(J465):DA(I238) DA(J466):DT(I237) DG(J467):DC(I236) DA(J468):DT(I235) DG(J469):DC(I234) DC(J470):DG(I233) DT(J471):DA(I232) DG(J472):DC(I231) DT(J473):DA(I230) DC(J474):DG(I229) DT(J475):DA(I228) DA(J476):DT(I227) DC(J477):DG(I226) DG(J478):DC(I225) DA(J479):DT(I224) DC(J480):DG(I223) DC(J481):DG(I222) DA(J482):DT(I221) DA(J483):DT(I220) DT(J484):DA(I219) DT(J485):DA(I218) DG(J486):DC(I217) DA(J487):DT(I216) DG(J488):DC(I215) DC(J489):DG(I214) DG(J490):DC(I213) DG(J491):DC(I212) DC(J492):DG(I211) DC(J493):DG(I210) DT(J494):DA(I209) DC(J495):DG(I208) DG(J496):DC(I207) DG(J497):DC(I206) DC(J498):DG(I205) DA(J499):DT(I204) DC(J500):DG(I203) DC(J501):DG(I202) DG(J502):DC(I201) DG(J503):DC(I200) DG(J504):DC(I199) DA(J505):DT(I198) DT(J506):DA(I197) DT(J507):DA(I196) DC(J508):DG(I195) DT(J509):DA(I194) DC(J510):DG(I193) DC(J511):DG(I192) DA(J512):DT(I191) DG(J513):DC(I190) DG(J514):DC(I189) DG(J515):DC(I188) DG(J516):DC(I187) DA(J517):DT(I186) DT(J518):DA(I185) DC(J519):DG(I184) DC(J520):DG(I183) DG(J522):DC(I181) DA(J523):DT(I180) DT(J524):DA(I179) DG(J525):DC(I178) DC(J526):DG(I177) DT(J527):DA(I176) DC(J528):DG(I175) DG(J529):DC(I174) DG(J530):DC(I173) DG(J531):DC(I172) DT(J532):DA(I171) DC(J533):DG(I170) DC(J534):DG(I169) DG(J535):DC(I168) DG(J536):DC(I167) DC(J537):DG(I166) DA(J538):DT(I165) DC(J539):DG(I164) DG(J540):DC(I163) DT(J541):DA(I162) DG(J542):DC(I161) DA(J543):DT(I160) DA(J544):DT(I159) DC(J545):DG(I158) DA(J546):DT(I157) DG(J547):DC(I156) DG(J548):DC(I155) DA(J549):DT(I154) DT(J550):DA(I153) DG(J551):DC(I152) DT(J552):DA(I151) DA(J553):DT(I150) DT(J554):DA(I149) DA(J555):DT(I148) DT(J556):DA(I147) DA(J557):DT(I146) DT(J558):DA(I145) DG(J559):DC(I144) DT(J560):DA(I143) DG(J561):DC(I142) DA(J562):DT(I141) DC(J563):DG(I140) DA(J564):DT(I139) DC(J565):DG(I138) DG(J566):DC(I137) DT(J567):DA(I136) DG(J568):DC(I135) DC(J569):DG(I134) DC(J570):DG(I133) DT(J571):DA(I132) DG(J572):DC(I131) DG(J573):DC(I130) DA(J574):DT(I129) DG(J575):DC(I128) DA(J576):DT(I127) DC(J577):DG(I126) DT(J578):DA(I125) DA(J579):DT(I124) DG(J580):DC(I123) DG(J581):DC(I122) DG(J582):DC(I121) DA(J583):DT(I120) DG(J584):DC(I119) DT(J585):DA(I118) DA(J586):DT(I117) DA(J587):DT(I116) DT(J588):DA(I115) DC(J589):DG(I114) DC(J590):DG(I113) DC(J591):DG(I112) DC(J592):DG(I111) DT(J593):DA(I110) DT(J594):DA(I109) DG(J595):DC(I108) DG(J596):DC(I107) DC(J597):DG(I106) DG(J598):DC(I105) DG(J599):DC(I104) DT(J601):DA(I103) DA(J602):DT(I101) DA(J603):DT(I100) DA(J604):DT(I99) DA(J605):DT(I98) DC(J606):DG(I97) DG(J607):DC(I96) DC(J608):DG(I95) DG(J609):DC(I94) DG(J610):DC(I93) DG(J611):DC(I92) DG(J612):DC(I91) DG(J613):DC(I90) DA(J614):DT(I89) DC(J615):DG(I88) DA(J616):DT(I87) DG(J617):DC(I86) DC(J618):DG(I85) DG(J619):DC(I84) DC(J620):DG(I83) DG(J621):DC(I82) DT(J622):DA(I81) DA(J623):DT(I80) DC(J624):DG(I79) DG(J625):DC(I78) DT(J626):DA(I77) DG(J627):DC(I76) DC(J628):DG(I75) DG(J629):DC(I74) DT(J630):DA(I73) DT(J631):DA(I72) DT(J632):DA(I71) DA(J633):DT(I70) DA(J634):DT(I69) DG(J635):DC(I68) DC(J636):DG(I67) DG(J637):DC(I66) DG(J638):DC(I65) DT(J639):DA(I64) DG(J640):DC(I63) DC(J641):DG(I62) DT(J642):DA(I61) DA(J643):DT(I60) DG(J644):DC(I59) DA(J645):DT(I58) DG(J646):DC(I57) DC(J647):DG(I56) DT(J648):DA(I55) DG(J649):DC(I54) DT(J650):DA(I53) DC(J651):DG(I52) DT(J652):DA(I51) DA(J653):DT(I50) DC(J654):DG(I49) DG(J655):DC(I48) DA(J656):DT(I47) DC(J657):DG(I46) DC(J658):DG(I45) DA(J659):DT(I44) DA(J660):DT(I43) DT(J661):DA(I42) DT(J662):DA(I41) DG(J663):DC(I40) DA(J664):DT(I39) DG(J665):DC(I38) DC(J666):DG(I37) DG(J667):DC(I36) DG(J668):DC(I35) DC(J669):DG(I34) DC(J670):DG(I33) DT(J671):DA(I32) DC(J672):DG(I31) DG(J673):DC(I30) DG(J674):DC(I29) DC(J675):DG(I28) DA(J676):DT(I27) DC(J677):DG(I26) DC(J678):DG(I25) DG(J679):DC(I24) DG(J680):DC(I23) DG(J681):DC(I22) DA(J682):DT(I21) DT(J683):DA(I20) DT(J684):DA(I19) DC(J685):DG(I18) DT(J686):DA(I17) DC(J687):DG(I16) DC(J688):DG(I15) DA(J689):DT(I14) DG(J690):DC(I13) DG(J691):DC(I12) DG(J692):DC(I11) DG(J693):DC(I10) DA(J694):DT(I9) DT(J695):DA(I8) DC(J696):DG(I7) DC(J697):DG(I6) DG(J698):DC(I5) DG(J699):DC(I4) DA(J700):DT(I3) chainQ ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >7pev_G:Histone-fold; title=NUCLEOSOME STACK OF THE 4X177 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DG(J181):DC(I522) DG(J182):DC(I521) DC(J183):DG(I520) DA(J184):DT(I519) DC(J185):DG(I518) DT(J186):DA(I517) DG(J187):DC(I516) DG(J188):DC(I515) DA(J189):DT(I514) DA(J190):DT(I513) DC(J191):DG(I512) DA(J192):DT(I511) DG(J193):DC(I510) DG(J194):DC(I509) DA(J195):DT(I508) DT(J196):DA(I507) DG(J197):DC(I506) DT(J198):DA(I505) DA(J199):DT(I504) DT(J200):DA(I503) DA(J201):DT(I502) DT(J202):DA(I501) DA(J203):DT(I500) DT(J204):DA(I499) DG(J205):DC(I498) DT(J206):DA(I497) DG(J207):DC(I496) DA(J208):DT(I495) DC(J209):DG(I494) DA(J210):DT(I493) DC(J211):DG(I492) DG(J212):DC(I491) DT(J213):DA(I490) DG(J214):DC(I489) DC(J215):DG(I488) DC(J216):DG(I487) DT(J217):DA(I486) DG(J218):DC(I485) DG(J219):DC(I484) DA(J220):DT(I483) DG(J221):DC(I482) DA(J222):DT(I481) DC(J223):DG(I480) DT(J224):DA(I479) DA(J225):DT(I478) DG(J226):DC(I477) DG(J227):DC(I476) DG(J228):DC(I475) DA(J229):DT(I474) DG(J230):DC(I473) DT(J231):DA(I472) DA(J232):DT(I471) DA(J233):DT(I470) DT(J234):DA(I469) DC(J235):DG(I468) DC(J236):DG(I467) DC(J237):DG(I466) DC(J238):DG(I465) DT(J239):DA(I464) DT(J240):DA(I463) DG(J241):DC(I462) DG(J242):DC(I461) DC(J243):DG(I460) DG(J244):DC(I459) DG(J245):DC(I458) DT(J246):DA(I457) DT(J247):DA(I456) DA(J248):DT(I455) DA(J249):DT(I454) DA(J250):DT(I453) DA(J251):DT(I452) DC(J252):DG(I451) DG(J253):DC(I450) DC(J254):DG(I449) DG(J255):DC(I448) DG(J256):DC(I447) DG(J257):DC(I446) DG(J258):DC(I445) DG(J259):DC(I444) DA(J260):DT(I443) DC(J261):DG(I442) DA(J262):DT(I441) DG(J263):DC(I440) DC(J264):DG(I439) DG(J265):DC(I438) DC(J266):DG(I437) DG(J267):DC(I436) DT(J268):DA(I435) DA(J269):DT(I434) DC(J270):DG(I433) DG(J271):DC(I432) DT(J272):DA(I431) DG(J273):DC(I430) DC(J274):DG(I429) DG(J275):DC(I428) DT(J277):DA(I427) DT(J278):DA(I425) DA(J279):DT(I424) DA(J280):DT(I423) DG(J281):DC(I422) DC(J282):DG(I421) DG(J283):DC(I420) DG(J284):DC(I419) DT(J285):DA(I418) DG(J286):DC(I417) DC(J287):DG(I416) DT(J288):DA(I415) DA(J289):DT(I414) DG(J290):DC(I413) DA(J291):DT(I412) DG(J292):DC(I411) DC(J293):DG(I410) DT(J294):DA(I409) DG(J295):DC(I408) DT(J296):DA(I407) DC(J297):DG(I406) DT(J298):DA(I405) DA(J299):DT(I404) DC(J300):DG(I403) DG(J301):DC(I402) DA(J302):DT(I401) DC(J303):DG(I400) DC(J304):DG(I399) DA(J305):DT(I398) DA(J306):DT(I397) DT(J307):DA(I396) DT(J308):DA(I395) DG(J309):DC(I394) DA(J310):DT(I393) DG(J311):DC(I392) DC(J312):DG(I391) DG(J313):DC(I390) DG(J314):DC(I389) DC(J315):DG(I388) DC(J316):DG(I387) DT(J317):DA(I386) DC(J318):DG(I385) DG(J319):DC(I384) DG(J320):DC(I383) DC(J321):DG(I382) DA(J322):DT(I381) DC(J323):DG(I380) DC(J324):DG(I379) DG(J325):DC(I378) DG(J326):DC(I377) DG(J327):DC(I376) DA(J328):DT(I375) DT(J329):DA(I374) DT(J330):DA(I373) DC(J331):DG(I372) DT(J332):DA(I371) DC(J333):DG(I370) DC(J334):DG(I369) DA(J335):DT(I368) DG(J336):DC(I367) DG(J337):DC(I366) DG(J338):DC(I365) DG(J339):DC(I364) DA(J340):DT(I363) DT(J341):DA(I362) DC(J342):DG(I361) DC(J343):DG(I360) DG(J344):DC(I359) DG(J345):DC(I358) DA(J346):DT(I357) DT(J347):DA(I356) DG(J348):DC(I355) DC(J349):DG(I354) DT(J350):DA(I353) DC(J351):DG(I352) DG(J525):DC(I178) DC(J526):DG(I177) DT(J527):DA(I176) DC(J528):DG(I175) DG(J529):DC(I174) DG(J530):DC(I173) DG(J531):DC(I172) DT(J532):DA(I171) DC(J533):DG(I170) DC(J534):DG(I169) DG(J535):DC(I168) DG(J536):DC(I167) DC(J537):DG(I166) DA(J538):DT(I165) DC(J539):DG(I164) DT(J540):DA(I163) DG(J541):DC(I162) DG(J542):DC(I161) DA(J543):DT(I160) DA(J544):DT(I159) DC(J545):DG(I158) DA(J546):DT(I157) DG(J547):DC(I156) DG(J548):DC(I155) DA(J549):DT(I154) DT(J550):DA(I153) DG(J551):DC(I152) DT(J552):DA(I151) DA(J553):DT(I150) DT(J554):DA(I149) DA(J555):DT(I148) DT(J556):DA(I147) DA(J557):DT(I146) DT(J558):DA(I145) DG(J559):DC(I144) DT(J560):DA(I143) DG(J561):DC(I142) DA(J562):DT(I141) DC(J563):DG(I140) DA(J564):DT(I139) DC(J565):DG(I138) DG(J566):DC(I137) DT(J567):DA(I136) DG(J568):DC(I135) DC(J569):DG(I134) DC(J570):DG(I133) DT(J571):DA(I132) DG(J572):DC(I131) DG(J573):DC(I130) DA(J574):DT(I129) DG(J575):DC(I128) DA(J576):DT(I127) DC(J577):DG(I126) DT(J578):DA(I125) DA(J579):DT(I124) DG(J580):DC(I123) DG(J581):DC(I122) DG(J582):DC(I121) DA(J583):DT(I120) DG(J584):DC(I119) DT(J585):DA(I118) DA(J586):DT(I117) DA(J587):DT(I116) DT(J588):DA(I115) DC(J589):DG(I114) DC(J590):DG(I113) DC(J591):DG(I112) DC(J592):DG(I111) DT(J593):DA(I110) DT(J594):DA(I109) DG(J595):DC(I108) DG(J596):DC(I107) DC(J597):DG(I106) DG(J598):DC(I105) DG(J599):DC(I104) DT(J600):DA(I103) DT(J601):DA(I102) DA(J602):DT(I101) DA(J603):DT(I100) DA(J604):DT(I99) DA(J605):DT(I98) DC(J606):DG(I97) DG(J607):DC(I96) DC(J608):DG(I95) DG(J609):DC(I94) DG(J610):DC(I93) DG(J611):DC(I92) DG(J612):DC(I91) DG(J613):DC(I90) DA(J614):DT(I89) DC(J615):DG(I88) DA(J616):DT(I87) DG(J617):DC(I86) DC(J618):DG(I85) DG(J619):DC(I84) DC(J620):DG(I83) DG(J621):DC(I82) DT(J622):DA(I81) DA(J623):DT(I80) DC(J624):DG(I79) DG(J625):DC(I78) DT(J626):DA(I77) DG(J627):DC(I76) DC(J628):DG(I75) DG(J629):DC(I74) DT(J631):DA(I73) DT(J632):DA(I71) DA(J633):DT(I70) DA(J634):DT(I69) DG(J635):DC(I68) DC(J636):DG(I67) DG(J637):DC(I66) DG(J638):DC(I65) DT(J639):DA(I64) DG(J640):DC(I63) DC(J641):DG(I62) DT(J642):DA(I61) DA(J643):DT(I60) DG(J644):DC(I59) DA(J645):DT(I58) DG(J646):DC(I57) DC(J647):DG(I56) DT(J648):DA(I55) DG(J649):DC(I54) DT(J650):DA(I53) DC(J651):DG(I52) DT(J652):DA(I51) DA(J653):DT(I50) DC(J654):DG(I49) DG(J655):DC(I48) DA(J656):DT(I47) DC(J657):DG(I46) DC(J658):DG(I45) DA(J659):DT(I44) DA(J660):DT(I43) DT(J661):DA(I42) DT(J662):DA(I41) DG(J663):DC(I40) DA(J664):DT(I39) DG(J665):DC(I38) DC(J666):DG(I37) DG(J667):DC(I36) DG(J668):DC(I35) DC(J669):DG(I34) DC(J670):DG(I33) DT(J671):DA(I32) DC(J672):DG(I31) DG(J673):DC(I30) DG(J674):DC(I29) DC(J675):DG(I28) DA(J676):DT(I27) DC(J677):DG(I26) DC(J678):DG(I25) DG(J679):DC(I24) DG(J680):DC(I23) DG(J681):DC(I22) DA(J682):DT(I21) DT(J683):DA(I20) DT(J684):DA(I19) DC(J685):DG(I18) DT(J686):DA(I17) DC(J687):DG(I16) DC(J688):DG(I15) DA(J689):DT(I14) DG(J690):DC(I13) DG(J691):DC(I12) DG(J692):DC(I11) DG(J693):DC(I10) DA(J694):DT(I9) DT(J695):DA(I8) DC(J696):DG(I7) DC(J697):DG(I6) DG(J698):DC(I5) DG(J699):DC(I4) DG(J700):DC(I3) chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >7pew_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME 1 OF THE 4X177 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DT(I3):DA(J700) DC(I4):DG(J699) DC(I5):DG(J698) DG(I6):DC(J697) DG(I7):DC(J696) DA(I8):DT(J695) DT(I9):DA(J694) DC(I10):DG(J693) DC(I11):DG(J692) DC(I12):DG(J691) DC(I13):DG(J690) DT(I14):DA(J689) DG(I15):DC(J688) DG(I16):DC(J687) DA(I17):DT(J686) DG(I18):DC(J685) DA(I19):DT(J684) DA(I20):DT(J683) DT(I21):DA(J682) DC(I22):DG(J681) DC(I23):DG(J680) DC(I24):DG(J679) DG(I25):DC(J678) DG(I26):DC(J677) DT(I27):DA(J676) DG(I28):DC(J675) DC(I29):DG(J674) DC(I30):DG(J673) DG(I31):DC(J672) DA(I32):DT(J671) DG(I33):DC(J670) DG(I34):DC(J669) DC(I35):DG(J668) DC(I36):DG(J667) DG(I37):DC(J666) DC(I38):DG(J665) DT(I39):DA(J664) DC(I40):DG(J663) DA(I41):DT(J662) DA(I42):DT(J661) DT(I43):DA(J660) DT(I44):DA(J659) DG(I45):DC(J658) DG(I46):DC(J657) DT(I47):DA(J656) DC(I48):DG(J655) DG(I49):DC(J654) DT(I50):DA(J653) DA(I51):DT(J652) DG(I52):DC(J651) DA(I53):DT(J650) DC(I54):DG(J649) DA(I55):DT(J648) DG(I56):DC(J647) DC(I57):DG(J646) DT(I58):DA(J645) DC(I59):DG(J644) DT(I60):DA(J643) DA(I61):DT(J642) DG(I62):DC(J641) DC(I63):DG(J640) DA(I64):DT(J639) DC(I65):DG(J638) DC(I66):DG(J637) DG(I67):DC(J636) DC(I68):DG(J635) DT(I69):DA(J634) DT(I70):DA(J633) DA(I71):DT(J632) DA(I72):DT(J631) DA(I73):DT(J630) DC(I74):DG(J629) DG(I75):DC(J628) DC(I76):DG(J627) DA(I77):DT(J626) DC(I78):DG(J625) DG(I79):DC(J624) DT(I80):DA(J623) DA(I81):DT(J622) DC(I82):DG(J621) DG(I83):DC(J620) DC(I84):DG(J619) DG(I85):DC(J618) DC(I86):DG(J617) DT(I87):DA(J616) DG(I88):DC(J615) DT(I89):DA(J614) DC(I90):DG(J613) DC(I91):DG(J612) DC(I92):DG(J611) DC(I93):DG(J610) DC(I94):DG(J609) DG(I95):DC(J608) DC(I96):DG(J607) DG(I97):DC(J606) DT(I98):DA(J605) DT(I99):DA(J604) DT(I100):DA(J603) DT(I101):DA(J602) DA(I103):DT(J601) DC(I104):DG(J599) DC(I105):DG(J598) DG(I106):DC(J597) DC(I107):DG(J596) DC(I108):DG(J595) DA(I109):DT(J594) DA(I110):DT(J593) DG(I111):DC(J592) DG(I112):DC(J591) DG(I113):DC(J590) DG(I114):DC(J589) DA(I115):DT(J588) DT(I116):DA(J587) DT(I117):DA(J586) DA(I118):DT(J585) DC(I119):DG(J584) DT(I120):DA(J583) DC(I121):DG(J582) DC(I122):DG(J581) DC(I123):DG(J580) DT(I124):DA(J579) DA(I125):DT(J578) DG(I126):DC(J577) DT(I127):DA(J576) DC(I128):DG(J575) DT(I129):DA(J574) DC(I130):DG(J573) DC(I131):DG(J572) DA(I132):DT(J571) DG(I133):DC(J570) DG(I134):DC(J569) DC(I135):DG(J568) DA(I136):DT(J567) DC(I137):DG(J566) DG(I138):DC(J565) DT(I139):DA(J564) DG(I140):DC(J563) DT(I141):DA(J562) DC(I142):DG(J561) DA(I143):DT(J560) DC(I144):DG(J559) DA(I145):DT(J558) DT(I146):DA(J557) DA(I147):DT(J556) DT(I148):DA(J555) DA(I149):DT(J554) DT(I150):DA(J553) DA(I151):DT(J552) DC(I152):DG(J551) DA(I153):DT(J550) DT(I154):DA(J549) DC(I155):DG(J548) DC(I156):DG(J547) DT(I157):DA(J546) DG(I158):DC(J545) DT(I159):DA(J544) DT(I160):DA(J543) DC(I161):DG(J542) DC(I162):DG(J541) DA(I163):DT(J540) DG(I164):DC(J539) DT(I165):DA(J538) DG(I166):DC(J537) DC(I167):DG(J536) DC(I168):DG(J535) DG(I169):DC(J534) DG(I170):DC(J533) DA(I171):DT(J532) DC(I172):DG(J531) DC(I173):DG(J530) DC(I174):DG(J529) DG(I175):DC(J528) DA(I176):DT(J527) DG(I177):DC(J526) DC(I178):DG(J525) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/KrsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kRsrkesysvyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7pew_G:Histone-fold; title=NUCLEOSOME 1 OF THE 4X177 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DT(I3):DA(J700) DC(I4):DG(J699) DC(I5):DG(J698) DG(I6):DC(J697) DG(I7):DC(J696) DA(I8):DT(J695) DT(I9):DA(J694) DC(I10):DG(J693) DC(I11):DG(J692) DC(I12):DG(J691) DC(I13):DG(J690) DT(I14):DA(J689) DG(I15):DC(J688) DG(I16):DC(J687) DA(I17):DT(J686) DG(I18):DC(J685) DA(I19):DT(J684) DA(I20):DT(J683) DT(I21):DA(J682) DC(I22):DG(J681) DC(I23):DG(J680) DC(I24):DG(J679) DG(I25):DC(J678) DG(I26):DC(J677) DT(I27):DA(J676) DG(I28):DC(J675) DC(I29):DG(J674) DC(I30):DG(J673) DG(I31):DC(J672) DA(I32):DT(J671) DG(I33):DC(J670) DG(I34):DC(J669) DC(I35):DG(J668) DC(I36):DG(J667) DG(I37):DC(J666) DC(I38):DG(J665) DT(I39):DA(J664) DC(I40):DG(J663) DA(I41):DT(J662) DA(I42):DT(J661) DT(I43):DA(J660) DT(I44):DA(J659) DG(I45):DC(J658) DG(I46):DC(J657) DT(I47):DA(J656) DC(I48):DG(J655) DG(I49):DC(J654) DT(I50):DA(J653) DA(I51):DT(J652) DG(I52):DC(J651) DA(I53):DT(J650) DC(I54):DG(J649) DA(I55):DT(J648) DG(I56):DC(J647) DC(I57):DG(J646) DT(I58):DA(J645) DC(I59):DG(J644) DT(I60):DA(J643) DA(I61):DT(J642) DG(I62):DC(J641) DC(I63):DG(J640) DA(I64):DT(J639) DC(I65):DG(J638) DC(I66):DG(J637) DG(I67):DC(J636) DC(I68):DG(J635) DT(I69):DA(J634) DT(I70):DA(J633) DA(I71):DT(J632) DA(I72):DT(J631) DA(I73):DT(J630) DC(I74):DG(J629) DG(I75):DC(J628) DC(I76):DG(J627) DA(I77):DT(J626) DC(I78):DG(J625) DG(I79):DC(J624) DT(I80):DA(J623) DA(I81):DT(J622) DC(I82):DG(J621) DG(I83):DC(J620) DC(I84):DG(J619) DG(I85):DC(J618) DC(I86):DG(J617) DT(I87):DA(J616) DG(I88):DC(J615) DT(I89):DA(J614) DC(I90):DG(J613) DC(I91):DG(J612) DC(I92):DG(J611) DC(I93):DG(J610) DC(I94):DG(J609) DG(I95):DC(J608) DC(I96):DG(J607) DG(I97):DC(J606) DT(I98):DA(J605) DT(I99):DA(J604) DT(I100):DA(J603) DT(I101):DA(J602) DA(I103):DT(J601) DC(I104):DG(J599) DC(I105):DG(J598) DG(I106):DC(J597) DC(I107):DG(J596) DC(I108):DG(J595) DA(I109):DT(J594) DA(I110):DT(J593) DG(I111):DC(J592) DG(I112):DC(J591) DG(I113):DC(J590) DG(I114):DC(J589) DA(I115):DT(J588) DT(I116):DA(J587) DT(I117):DA(J586) DA(I118):DT(J585) DC(I119):DG(J584) DT(I120):DA(J583) DC(I121):DG(J582) DC(I122):DG(J581) DC(I123):DG(J580) DT(I124):DA(J579) DA(I125):DT(J578) DG(I126):DC(J577) DT(I127):DA(J576) DC(I128):DG(J575) DT(I129):DA(J574) DC(I130):DG(J573) DC(I131):DG(J572) DA(I132):DT(J571) DG(I133):DC(J570) DG(I134):DC(J569) DC(I135):DG(J568) DA(I136):DT(J567) DC(I137):DG(J566) DG(I138):DC(J565) DT(I139):DA(J564) DG(I140):DC(J563) DT(I141):DA(J562) DC(I142):DG(J561) DA(I143):DT(J560) DC(I144):DG(J559) DA(I145):DT(J558) DT(I146):DA(J557) DA(I147):DT(J556) DT(I148):DA(J555) DA(I149):DT(J554) DT(I150):DA(J553) DA(I151):DT(J552) DC(I152):DG(J551) DA(I153):DT(J550) DT(I154):DA(J549) DC(I155):DG(J548) DC(I156):DG(J547) DT(I157):DA(J546) DG(I158):DC(J545) DT(I159):DA(J544) DT(I160):DA(J543) DC(I161):DG(J542) DC(I162):DG(J541) DA(I163):DT(J540) DG(I164):DC(J539) DT(I165):DA(J538) DG(I166):DC(J537) DC(I167):DG(J536) DC(I168):DG(J535) DG(I169):DC(J534) DG(I170):DC(J533) DA(I171):DT(J532) DC(I172):DG(J531) DC(I173):DG(J530) DC(I174):DG(J529) DG(I175):DC(J528) DA(I176):DT(J527) DG(I177):DC(J526) DC(I178):DG(J525) chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >7pey_KLMNOPQR:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME 3 OF THE 4X177 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DG(J181):DC(I522) DG(J182):DC(I521) DC(J183):DG(I520) DA(J184):DT(I519) DC(J185):DG(I518) DT(J186):DA(I517) DG(J187):DC(I516) DG(J188):DC(I515) DA(J189):DT(I514) DA(J190):DT(I513) DC(J191):DG(I512) DA(J192):DT(I511) DG(J193):DC(I510) DG(J194):DC(I509) DA(J195):DT(I508) DT(J196):DA(I507) DG(J197):DC(I506) DT(J198):DA(I505) DA(J199):DT(I504) DT(J200):DA(I503) DA(J201):DT(I502) DT(J202):DA(I501) DA(J203):DT(I500) DT(J204):DA(I499) DG(J205):DC(I498) DT(J206):DA(I497) DG(J207):DC(I496) DA(J208):DT(I495) DC(J209):DG(I494) DA(J210):DT(I493) DC(J211):DG(I492) DG(J212):DC(I491) DT(J213):DA(I490) DG(J214):DC(I489) DC(J215):DG(I488) DC(J216):DG(I487) DT(J217):DA(I486) DG(J218):DC(I485) DG(J219):DC(I484) DA(J220):DT(I483) DG(J221):DC(I482) DA(J222):DT(I481) DC(J223):DG(I480) DT(J224):DA(I479) DA(J225):DT(I478) DG(J226):DC(I477) DG(J227):DC(I476) DG(J228):DC(I475) DA(J229):DT(I474) DG(J230):DC(I473) DT(J231):DA(I472) DA(J232):DT(I471) DA(J233):DT(I470) DT(J234):DA(I469) DC(J235):DG(I468) DC(J236):DG(I467) DC(J237):DG(I466) DC(J238):DG(I465) DT(J239):DA(I464) DT(J240):DA(I463) DG(J241):DC(I462) DG(J242):DC(I461) DC(J243):DG(I460) DG(J244):DC(I459) DG(J245):DC(I458) DT(J246):DA(I457) DT(J247):DA(I456) DA(J248):DT(I455) DA(J249):DT(I454) DA(J250):DT(I453) DA(J251):DT(I452) DC(J252):DG(I451) DG(J253):DC(I450) DC(J254):DG(I449) DG(J255):DC(I448) DG(J256):DC(I447) DG(J257):DC(I446) DG(J258):DC(I445) DG(J259):DC(I444) DA(J260):DT(I443) DC(J261):DG(I442) DA(J262):DT(I441) DG(J263):DC(I440) DC(J264):DG(I439) DG(J265):DC(I438) DC(J266):DG(I437) DG(J267):DC(I436) DT(J268):DA(I435) DA(J269):DT(I434) DC(J270):DG(I433) DG(J271):DC(I432) DT(J272):DA(I431) DG(J273):DC(I430) DC(J274):DG(I429) DG(J275):DC(I428) DT(J276):DA(I427) DT(J277):DA(I426) DT(J278):DA(I425) DA(J279):DT(I424) DA(J280):DT(I423) DG(J281):DC(I422) DC(J282):DG(I421) DG(J283):DC(I420) DG(J284):DC(I419) DT(J285):DA(I418) DG(J286):DC(I417) DC(J287):DG(I416) DT(J288):DA(I415) DA(J289):DT(I414) DG(J290):DC(I413) DA(J291):DT(I412) DG(J292):DC(I411) DC(J293):DG(I410) DT(J294):DA(I409) DG(J295):DC(I408) DT(J296):DA(I407) DC(J297):DG(I406) DT(J298):DA(I405) DA(J299):DT(I404) DC(J300):DG(I403) DG(J301):DC(I402) DA(J302):DT(I401) DC(J303):DG(I400) DC(J304):DG(I399) DA(J305):DT(I398) DA(J306):DT(I397) DT(J307):DA(I396) DT(J308):DA(I395) DG(J309):DC(I394) DA(J310):DT(I393) DG(J311):DC(I392) DC(J312):DG(I391) DG(J313):DC(I390) DG(J314):DC(I389) DC(J315):DG(I388) DC(J316):DG(I387) DT(J317):DA(I386) DC(J318):DG(I385) DG(J319):DC(I384) DG(J320):DC(I383) DC(J321):DG(I382) DA(J322):DT(I381) DC(J323):DG(I380) DC(J324):DG(I379) DG(J325):DC(I378) DG(J326):DC(I377) DG(J327):DC(I376) DA(J328):DT(I375) DT(J329):DA(I374) DT(J330):DA(I373) DC(J331):DG(I372) DT(J332):DA(I371) DC(J333):DG(I370) DC(J334):DG(I369) DA(J335):DT(I368) DG(J336):DC(I367) DG(J337):DC(I366) DG(J338):DC(I365) DG(J339):DC(I364) DA(J340):DT(I363) DT(J341):DA(I362) DC(J342):DG(I361) DC(J343):DG(I360) DG(J344):DC(I359) DG(J345):DC(I358) DA(J346):DT(I357) DT(J347):DA(I356) DG(J348):DC(I355) DC(J349):DG(I354) DT(J350):DA(I353) DC(J351):DG(I352) chainK ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL chainM ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 1) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/kvlRDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/arakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/KrsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7pez_l:Histone-fold; title=NUCLEOSOME 4 OF THE 4X177 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DT(I519):DA(J184) DG(I520):DC(J183) DC(I521):DG(J182) DC(I522):DG(J181) DG(I523):DC(J180) DG(I524):DC(J179) DA(I525):DT(J178) DC(I526):DG(J177) DC(I527):DG(J176) DC(I528):DG(J175) DG(I529):DC(J174) DA(I530):DT(J173) DG(I531):DC(J172) DC(I532):DG(J171) DA(I533):DT(J170) DT(I534):DA(J169) DC(I535):DG(J168) DC(I536):DG(J167) DG(I537):DC(J166) DG(I538):DC(J165) DA(I539):DT(J164) DT(I540):DA(J163) DC(I541):DG(J162) DC(I542):DG(J161) DC(I543):DG(J160) DC(I544):DG(J159) DT(I545):DA(J158) DG(I546):DC(J157) DG(I547):DC(J156) DA(I548):DT(J155) DG(I549):DC(J154) DA(I550):DT(J153) DA(I551):DT(J152) DT(I552):DA(J151) DC(I553):DG(J150) DC(I554):DG(J149) DC(I555):DG(J148) DG(I556):DC(J147) DG(I557):DC(J146) DT(I558):DA(J145) DG(I559):DC(J144) DC(I560):DG(J143) DC(I561):DG(J142) DG(I562):DC(J141) DA(I563):DT(J140) DG(I564):DC(J139) DG(I565):DC(J138) DC(I566):DG(J137) DC(I567):DG(J136) DG(I568):DC(J135) DC(I569):DG(J134) DT(I570):DA(J133) DC(I571):DG(J132) DA(I572):DT(J131) DA(I573):DT(J130) DT(I574):DA(J129) DT(I575):DA(J128) DG(I576):DC(J127) DG(I577):DC(J126) DT(I578):DA(J125) DC(I579):DG(J124) DG(I580):DC(J123) DT(I581):DA(J122) DA(I582):DT(J121) DG(I583):DC(J120) DA(I584):DT(J119) DC(I585):DG(J118) DA(I586):DT(J117) DG(I587):DC(J116) DC(I588):DG(J115) DT(I589):DA(J114) DC(I590):DG(J113) DT(I591):DA(J112) DA(I592):DT(J111) DG(I593):DC(J110) DC(I594):DG(J109) DA(I595):DT(J108) DC(I596):DG(J107) DC(I597):DG(J106) DG(I598):DC(J105) DC(I599):DG(J104) DT(I600):DA(J103) DT(I601):DA(J102) DA(I602):DT(J101) DA(I603):DT(J100) DA(I604):DT(J99) DC(I605):DG(J98) DG(I606):DC(J97) DC(I607):DG(J96) DA(I608):DT(J95) DC(I609):DG(J94) DG(I610):DC(J93) DT(I611):DA(J92) DA(I612):DT(J91) DC(I613):DG(J90) DG(I614):DC(J89) DC(I615):DG(J88) DG(I616):DC(J87) DC(I617):DG(J86) DT(I618):DA(J85) DG(I619):DC(J84) DT(I620):DA(J83) DC(I621):DG(J82) DC(I622):DG(J81) DC(I623):DG(J80) DC(I624):DG(J79) DC(I625):DG(J78) DG(I626):DC(J77) DC(I627):DG(J76) DG(I628):DC(J75) DT(I629):DA(J74) DT(I630):DA(J73) DT(I631):DA(J72) DT(I632):DA(J71) DA(I633):DT(J70) DA(I634):DT(J69) DC(I635):DG(J68) DC(I636):DG(J67) DG(I637):DC(J66) DC(I638):DG(J65) DC(I639):DG(J64) DA(I640):DT(J63) DA(I641):DT(J62) DG(I642):DC(J61) DG(I643):DC(J60) DG(I644):DC(J59) DG(I645):DC(J58) DA(I646):DT(J57) DT(I647):DA(J56) DT(I648):DA(J55) DA(I649):DT(J54) DC(I650):DG(J53) DT(I651):DA(J52) DC(I652):DG(J51) DC(I653):DG(J50) DC(I654):DG(J49) DT(I655):DA(J48) DA(I656):DT(J47) DG(I657):DC(J46) DT(I658):DA(J45) DC(I659):DG(J44) DT(I660):DA(J43) DC(I661):DG(J42) DC(I662):DG(J41) DA(I663):DT(J40) DG(I664):DC(J39) DG(I665):DC(J38) DC(I666):DG(J37) DA(I667):DT(J36) DC(I668):DG(J35) DG(I669):DC(J34) DT(I670):DA(J33) DG(I671):DC(J32) DT(I672):DA(J31) DC(I673):DG(J30) DA(I674):DT(J29) DC(I675):DG(J28) DA(I676):DT(J27) DT(I677):DA(J26) DA(I678):DT(J25) DT(I679):DA(J24) DA(I680):DT(J23) DT(I681):DA(J22) DA(I682):DT(J21) DC(I683):DG(J20) DT(I685):DT(J19) DC(I686):DG(J17) DC(I687):DG(J16) DT(I688):DA(J15) DG(I689):DC(J14) DT(I690):DA(J13) DT(I691):DA(J12) DC(I692):DG(J11) DC(I693):DG(J10) DA(I694):DT(J9) DG(I695):DC(J8) DT(I696):DA(J7) DG(I697):DC(J6) DC(I698):DG(J5) DC(I699):DG(J4) DG(I700):DC(J3) chainl ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >7pf0_b:Histone-fold; title=TRINUCLEOSOME OF THE 4X177 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DT(J198):DA(I551) DA(J199):DT(I550) DC(J200):DG(I549) DT(J201):DA(I548) DT(J202):DA(I547) DA(J203):DT(I546) DC(J204):DG(I545) DA(J205):DT(I544) DT(J206):DA(I543) DG(J207):DC(I542) DA(J208):DT(I541) DC(J209):DG(I540) DA(J210):DT(I539) DG(J211):DC(I538) DG(J212):DC(I537) DA(J213):DT(I536) DT(J214):DA(I535) DG(J215):DC(I534) DT(J216):DA(I533) DA(J217):DT(I532) DT(J218):DA(I531) DA(J219):DT(I530) DT(J220):DA(I529) DA(J221):DT(I528) DT(J222):DA(I527) DC(J223):DG(I526) DT(J224):DA(I525) DG(J225):DC(I524) DA(J226):DT(I523) DC(J227):DG(I522) DA(J228):DT(I521) DC(J229):DG(I520) DG(J230):DC(I519) DT(J231):DA(I518) DG(J232):DC(I517) DC(J233):DG(I516) DC(J234):DG(I515) DT(J235):DA(I514) DG(J236):DC(I513) DG(J237):DC(I512) DA(J238):DT(I511) DG(J239):DC(I510) DA(J240):DT(I509) DC(J241):DG(I508) DT(J242):DA(I507) DA(J243):DT(I506) DG(J244):DC(I505) DG(J245):DC(I504) DG(J246):DC(I503) DA(J247):DT(I502) DG(J248):DC(I501) DT(J249):DA(I500) DA(J250):DT(I499) DA(J251):DT(I498) DT(J252):DA(I497) DC(J253):DG(I496) DC(J254):DG(I495) DC(J255):DG(I494) DC(J256):DG(I493) DT(J257):DA(I492) DT(J258):DA(I491) DG(J259):DC(I490) DG(J260):DC(I489) DC(J261):DG(I488) DG(J262):DC(I487) DG(J263):DC(I486) DT(J264):DA(I485) DT(J265):DA(I484) DA(J266):DT(I483) DA(J267):DT(I482) DA(J268):DT(I481) DA(J269):DT(I480) DC(J270):DG(I479) DG(J271):DC(I478) DC(J272):DG(I477) DG(J273):DC(I476) DG(J274):DC(I475) DG(J275):DC(I474) DG(J276):DC(I473) DG(J277):DC(I472) DA(J278):DT(I471) DC(J279):DG(I470) DA(J280):DT(I469) DG(J281):DC(I468) DC(J282):DG(I467) DG(J283):DC(I466) DC(J284):DG(I465) DG(J285):DC(I464) DT(J286):DA(I463) DA(J287):DT(I462) DC(J288):DG(I461) DG(J289):DC(I460) DT(J290):DA(I459) DG(J291):DC(I458) DC(J292):DG(I457) DG(J293):DC(I456) DT(J294):DA(I455) DT(J295):DA(I454) DT(J296):DA(I453) DA(J297):DT(I452) DA(J298):DT(I451) DG(J299):DC(I450) DC(J300):DG(I449) DG(J301):DC(I448) DG(J302):DC(I447) DT(J303):DA(I446) DG(J304):DC(I445) DC(J305):DG(I444) DT(J306):DA(I443) DA(J307):DT(I442) DG(J308):DC(I441) DA(J309):DT(I440) DG(J310):DC(I439) DC(J311):DG(I438) DT(J312):DA(I437) DG(J313):DC(I436) DT(J314):DA(I435) DC(J315):DG(I434) DT(J316):DA(I433) DA(J317):DT(I432) DC(J318):DG(I431) DG(J319):DC(I430) DA(J320):DT(I429) DC(J321):DG(I428) DC(J322):DG(I427) DA(J323):DT(I426) DA(J324):DT(I425) DT(J325):DA(I424) DT(J326):DA(I423) DG(J327):DC(I422) DA(J328):DT(I421) DG(J329):DC(I420) DC(J330):DG(I419) DG(J331):DC(I418) DG(J332):DC(I417) DC(J333):DG(I416) DC(J334):DG(I415) DT(J335):DA(I414) DC(J336):DG(I413) DG(J337):DC(I412) DG(J338):DC(I411) DC(J339):DG(I410) DA(J340):DT(I409) DC(J341):DG(I408) DC(J342):DG(I407) DG(J343):DC(I406) DG(J344):DC(I405) DG(J345):DC(I404) DA(J346):DT(I403) DT(J347):DA(I402) DT(J348):DA(I401) DC(J349):DG(I400) DT(J350):DA(I399) DC(J351):DG(I398) DC(J352):DG(I397) DA(J353):DT(I396) DG(J354):DC(I395) DG(J355):DC(I394) DC(J356):DG(I393) DG(J357):DC(I392) DG(J358):DC(I391) DC(J359):DG(I390) DC(J360):DG(I389) DA(J361):DT(I388) DG(J362):DC(I387) DT(J363):DA(I386) DG(J364):DC(I385) DC(J365):DG(I384) DG(J366):DC(I383) DC(J367):DG(I382) DG(J368):DC(I381) DA(J369):DT(I380) DG(J370):DC(I379) DA(J371):DT(I378) DC(J372):DG(I377) DG(J373):DC(I376) DG(J374):DC(I375) DG(J375):DC(I374) DT(J376):DA(I373) DT(J377):DA(I372) DA(J378):DT(I371) DC(J379):DG(I370) DC(J380):DG(I369) DT(J381):DA(I368) DT(J382):DA(I367) DA(J383):DT(I366) DA(J384):DT(I365) DT(J385):DA(I364) DA(J386):DT(I363) DC(J387):DG(I362) DT(J388):DA(I361) DT(J389):DA(I360) DA(J390):DT(I359) DC(J391):DG(I358) DA(J392):DT(I357) DT(J393):DA(I356) DG(J394):DC(I355) DA(J395):DT(I354) DC(J396):DG(I353) DA(J397):DT(I352) DG(J398):DC(I351) DG(J399):DC(I350) DA(J400):DT(I349) DT(J401):DA(I348) DG(J402):DC(I347) DT(J403):DA(I346) DA(J404):DT(I345) DT(J405):DA(I344) DA(J406):DT(I343) DT(J407):DA(I342) DA(J408):DT(I341) DT(J409):DA(I340) DC(J410):DG(I339) DT(J411):DA(I338) DG(J412):DC(I337) DA(J413):DT(I336) DC(J414):DG(I335) DA(J415):DT(I334) DC(J416):DG(I333) DG(J417):DC(I332) DT(J418):DA(I331) DG(J419):DC(I330) DC(J420):DG(I329) DC(J421):DG(I328) DT(J422):DA(I327) DG(J423):DC(I326) DG(J424):DC(I325) DA(J425):DT(I324) DG(J426):DC(I323) DA(J427):DT(I322) DC(J428):DG(I321) DT(J429):DA(I320) DA(J430):DT(I319) DG(J431):DC(I318) DG(J432):DC(I317) DG(J433):DC(I316) DA(J434):DT(I315) DG(J435):DC(I314) DT(J436):DA(I313) DA(J437):DT(I312) DA(J438):DT(I311) DT(J439):DA(I310) DC(J440):DG(I309) DC(J441):DG(I308) DC(J442):DG(I307) DC(J443):DG(I306) DT(J444):DA(I305) DT(J445):DA(I304) DG(J446):DC(I303) DG(J447):DC(I302) DC(J448):DG(I301) DG(J449):DC(I300) DG(J450):DC(I299) DT(J451):DA(I298) DT(J452):DA(I297) DA(J453):DT(I296) DA(J454):DT(I295) DA(J455):DT(I294) DA(J456):DT(I293) DC(J457):DG(I292) DG(J458):DC(I291) DC(J459):DG(I290) DG(J460):DC(I289) DG(J461):DC(I288) DG(J462):DC(I287) DG(J463):DC(I286) DG(J464):DC(I285) DA(J465):DT(I284) DC(J466):DG(I283) DA(J467):DT(I282) DG(J468):DC(I281) DC(J469):DG(I280) DG(J470):DC(I279) DC(J471):DG(I278) DG(J472):DC(I277) DT(J473):DA(I276) DA(J474):DT(I275) DC(J475):DG(I274) DG(J476):DC(I273) DT(J477):DA(I272) DG(J478):DC(I271) DC(J479):DG(I270) DG(J480):DC(I269) DT(J481):DA(I268) DT(J482):DA(I267) DT(J483):DA(I266) DA(J484):DT(I265) DA(J485):DT(I264) DG(J486):DC(I263) DC(J487):DG(I262) DG(J488):DC(I261) DG(J489):DC(I260) DT(J490):DA(I259) DG(J491):DC(I258) DC(J492):DG(I257) DT(J493):DA(I256) DA(J494):DT(I255) DG(J495):DC(I254) DA(J496):DT(I253) DG(J497):DC(I252) DC(J498):DG(I251) DT(J499):DA(I250) DG(J500):DC(I249) DT(J501):DA(I248) DC(J502):DG(I247) DT(J503):DA(I246) DA(J504):DT(I245) DC(J505):DG(I244) DG(J506):DC(I243) DA(J507):DT(I242) DC(J508):DG(I241) DC(J509):DG(I240) DA(J510):DT(I239) DA(J511):DT(I238) DT(J512):DA(I237) DT(J513):DA(I236) DG(J514):DC(I235) DA(J515):DT(I234) DG(J516):DC(I233) DC(J517):DG(I232) DG(J518):DC(I231) DG(J519):DC(I230) DC(J520):DG(I229) DC(J521):DG(I228) DT(J522):DA(I227) DC(J523):DG(I226) DG(J524):DC(I225) DG(J525):DC(I224) DC(J526):DG(I223) DA(J527):DT(I222) DC(J528):DG(I221) DC(J529):DG(I220) DG(J530):DC(I219) DG(J531):DC(I218) DG(J532):DC(I217) DA(J533):DT(I216) DT(J534):DA(I215) DT(J535):DA(I214) DC(J536):DG(I213) DT(J537):DA(I212) DC(J538):DG(I211) DC(J539):DG(I210) DA(J540):DT(I209) DG(J541):DC(I208) DG(J542):DC(I207) DC(J543):DG(I206) DG(J544):DC(I205) DG(J545):DC(I204) DC(J546):DG(I203) DC(J547):DG(I202) DA(J548):DT(I201) DG(J549):DC(I200) DT(J550):DA(I199) DG(J551):DC(I198) DC(J552):DG(I197) DG(J553):DC(I196) DC(J554):DG(I195) DG(J555):DC(I194) DA(J556):DT(I193) DG(J557):DC(I192) DA(J558):DT(I191) DC(J559):DG(I190) DG(J560):DC(I189) DG(J561):DC(I188) DG(J562):DC(I187) DT(J563):DA(I186) DT(J564):DA(I185) DA(J565):DT(I184) DC(J566):DG(I183) DC(J567):DG(I182) DT(J568):DA(I181) DT(J569):DA(I180) DA(J570):DT(I179) DA(J571):DT(I178) DT(J572):DA(I177) DA(J573):DT(I176) DC(J574):DG(I175) DT(J575):DA(I174) DT(J576):DA(I173) DA(J577):DT(I172) DC(J578):DG(I171) DA(J579):DT(I170) DT(J580):DA(I169) DG(J581):DC(I168) DA(J582):DT(I167) DC(J583):DG(I166) DA(J584):DT(I165) DG(J585):DC(I164) DG(J586):DC(I163) DG(J587):DC(I162) DT(J588):DA(I161) DG(J589):DC(I160) DT(J590):DA(I159) DA(J591):DT(I158) DT(J592):DA(I157) DA(J593):DT(I156) DT(J594):DA(I155) DA(J595):DT(I154) DT(J596):DA(I153) DC(J597):DG(I152) DT(J598):DA(I151) DG(J599):DC(I150) DA(J600):DT(I149) DC(J601):DG(I148) DA(J602):DT(I147) DC(J603):DG(I146) DG(J604):DC(I145) DT(J605):DA(I144) DG(J606):DC(I143) DC(J607):DG(I142) DC(J608):DG(I141) DT(J609):DA(I140) DG(J610):DC(I139) DG(J611):DC(I138) DA(J612):DT(I137) DG(J613):DC(I136) DA(J614):DT(I135) DC(J615):DG(I134) DT(J616):DA(I133) DA(J617):DT(I132) DG(J618):DC(I131) DG(J619):DC(I130) DG(J620):DC(I129) DA(J621):DT(I128) DG(J622):DC(I127) DT(J623):DA(I126) DA(J624):DT(I125) DA(J625):DT(I124) DT(J626):DA(I123) DC(J627):DG(I122) DC(J628):DG(I121) DC(J629):DG(I120) DC(J630):DG(I119) DT(J631):DA(I118) DT(J632):DA(I117) DG(J633):DC(I116) DG(J634):DC(I115) DC(J635):DG(I114) DG(J636):DC(I113) DG(J637):DC(I112) DT(J638):DA(I111) DT(J639):DA(I110) DA(J640):DT(I109) DA(J641):DT(I108) DA(J642):DT(I107) DA(J643):DT(I106) DC(J644):DG(I105) DG(J645):DC(I104) DC(J646):DG(I103) DG(J647):DC(I102) DG(J648):DC(I101) DG(J649):DC(I100) DG(J650):DC(I99) DG(J651):DC(I98) DA(J652):DT(I97) DC(J653):DG(I96) DA(J654):DT(I95) DG(J655):DC(I94) DC(J656):DG(I93) DG(J657):DC(I92) DC(J658):DG(I91) DG(J659):DC(I90) DT(J660):DA(I89) DA(J661):DT(I88) DC(J662):DG(I87) DG(J663):DC(I86) DT(J664):DA(I85) DG(J665):DC(I84) DC(J666):DG(I83) DG(J667):DC(I82) DT(J668):DA(I81) DT(J669):DA(I80) DT(J670):DA(I79) DA(J671):DT(I78) DA(J672):DT(I77) DG(J673):DC(I76) DC(J674):DG(I75) DG(J675):DC(I74) DG(J676):DC(I73) DT(J677):DA(I72) DG(J678):DC(I71) DC(J679):DG(I70) DT(J680):DA(I69) DA(J681):DT(I68) DG(J682):DC(I67) DA(J683):DT(I66) DG(J684):DC(I65) DC(J685):DG(I64) DT(J686):DA(I63) DG(J687):DC(I62) DT(J688):DA(I61) DC(J689):DG(I60) DT(J690):DA(I59) DA(J691):DT(I58) DC(J692):DG(I57) DG(J693):DC(I56) DA(J694):DT(I55) DC(J695):DG(I54) DC(J696):DG(I53) DA(J697):DT(I52) DA(J698):DT(I51) DT(J699):DA(I50) DT(J700):DA(I49) DG(J701):DC(I48) DA(J702):DT(I47) DG(J703):DC(I46) DC(J704):DG(I45) DG(J705):DC(I44) DG(J706):DC(I43) DC(J707):DG(I42) DC(J708):DG(I41) DT(J709):DA(I40) DC(J710):DG(I39) DG(J711):DC(I38) DG(J712):DC(I37) DC(J713):DG(I36) DA(J714):DT(I35) DC(J715):DG(I34) DC(J716):DG(I33) DG(J717):DC(I32) DG(J718):DC(I31) DG(J719):DC(I30) DA(J720):DT(I29) DT(J721):DA(I28) DT(J722):DA(I27) DC(J723):DG(I26) DT(J724):DA(I25) DC(J725):DG(I24) DC(J726):DG(I23) DA(J727):DT(I22) DG(J728):DC(I21) DG(J729):DC(I20) DC(J730):DG(I19) DG(J731):DC(I18) DG(J732):DC(I17) DC(J733):DG(I16) DC(J734):DG(I15) DA(J735):DT(I14) DG(J736):DC(I13) DT(J737):DA(I12) DG(J738):DC(I11) chainb ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >7pf3_s:"Winged_helix"_DNA-binding_domain; title=NUCLEOSOME 4 OF THE 4X187 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DC(I572):DG(J177) DA(I573):DT(J176) DC(I574):DG(J175) DT(I575):DA(J174) DG(I576):DC(J173) DG(I577):DC(J172) DC(I578):DG(J171) DC(I579):DG(J170) DG(I580):DC(J169) DC(I581):DG(J168) DC(I582):DG(J167) DT(I583):DA(J166) DG(I584):DC(J165) DG(I585):DC(J164) DA(I586):DT(J163) DG(I587):DC(J162) DA(I588):DT(J161) DA(I589):DT(J160) DT(I590):DA(J159) DC(I591):DG(J158) DC(I592):DG(J157) DC(I593):DG(J156) DG(I594):DC(J155) DG(I595):DC(J154) DT(I596):DA(J153) DG(I597):DC(J152) DC(I598):DG(J151) DC(I599):DG(J150) DG(I600):DC(J149) DA(I601):DT(J148) DG(I602):DC(J147) DG(I603):DC(J146) DC(I604):DG(J145) DC(I605):DG(J144) DG(I606):DC(J143) DC(I607):DG(J142) DT(I608):DA(J141) DC(I609):DG(J140) DA(I610):DT(J139) DA(I611):DT(J138) DT(I612):DA(J137) DT(I613):DA(J136) DG(I614):DC(J135) DG(I615):DC(J134) DT(I616):DA(J133) DC(I617):DG(J132) DG(I618):DC(J131) DT(I619):DA(J130) DA(I620):DT(J129) DG(I621):DC(J128) DA(I622):DT(J127) DC(I623):DG(J126) DA(I624):DT(J125) DG(I625):DC(J124) DC(I626):DG(J123) DT(I627):DA(J122) DC(I628):DG(J121) DT(I629):DA(J120) DA(I630):DT(J119) DG(I631):DC(J118) DC(I632):DG(J117) DA(I633):DT(J116) DC(I634):DG(J115) DC(I635):DG(J114) DG(I636):DC(J113) DC(I637):DG(J112) DT(I638):DA(J111) DT(I639):DA(J110) DA(I640):DT(J109) DA(I642):DT(J108) DC(I643):DG(J106) DG(I644):DC(J105) DC(I645):DG(J104) DA(I646):DT(J103) DC(I647):DG(J102) DG(I648):DC(J101) DT(I649):DA(J100) DA(I650):DT(J99) DC(I651):DG(J98) DG(I652):DC(J97) DC(I653):DG(J96) DG(I654):DC(J95) DC(I655):DG(J94) DT(I656):DA(J93) DG(I657):DC(J92) DT(I658):DA(J91) DC(I659):DG(J90) DC(I660):DG(J89) DC(I661):DG(J88) DC(I662):DG(J87) DC(I663):DG(J86) DG(I664):DC(J85) DC(I665):DG(J84) DG(I666):DC(J83) DT(I667):DA(J82) DT(I668):DA(J81) DT(I669):DA(J80) DT(I670):DA(J79) DA(I672):DT(J78) DC(I673):DG(J76) DC(I674):DG(J75) DG(I675):DC(J74) DC(I676):DG(J73) DC(I677):DG(J72) DA(I678):DT(J71) DA(I679):DT(J70) DG(I680):DC(J69) DG(I681):DC(J68) DG(I682):DC(J67) DG(I683):DC(J66) DA(I684):DT(J65) DT(I685):DA(J64) DT(I686):DA(J63) DA(I687):DT(J62) DC(I688):DG(J61) DT(I689):DA(J60) DC(I690):DG(J59) DC(I691):DG(J58) DC(I692):DG(J57) DT(I693):DA(J56) DA(I694):DT(J55) DG(I695):DC(J54) DT(I696):DA(J53) DC(I697):DG(J52) DT(I698):DA(J51) DC(I699):DG(J50) DC(I700):DG(J49) DA(I701):DT(J48) DG(I702):DC(J47) DG(I703):DC(J46) DC(I704):DG(J45) DA(I705):DT(J44) DC(I706):DG(J43) DG(I707):DC(J42) DT(I708):DA(J41) DG(I709):DC(J40) DT(I710):DA(J39) DC(I711):DG(J38) DA(I712):DT(J37) DG(I713):DC(J36) DA(I714):DT(J35) DT(I715):DA(J34) DA(I716):DT(J33) DT(I717):DA(J32) DA(I718):DT(J31) DT(I719):DA(J30) DA(I720):DT(J29) DC(I721):DG(J28) DA(I722):DT(J27) DT(I723):DA(J26) DC(I724):DG(J25) DC(I725):DG(J24) DT(I726):DA(J23) DG(I727):DC(J22) DT(I728):DA(J21) DC(I729):DG(J20) DA(I730):DT(J19) DT(I731):DA(J18) DG(I732):DC(J17) DT(I733):DA(J16) DA(I734):DT(J15) DA(I735):DT(J14) DG(I736):DC(J13) DT(I737):DA(J12) DA(I738):DT(J11) chains ( 44) ARG78 0 0 0 0 0 1 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) SER101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgppvselitkavaaskersgvslaalkkalaaagydveknnsRiklglkslvskgtlvqtkgtgaSgsfklnkk >7pf4_KLMNOPQR:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME 3 OF THE 4X187 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DC(I385):DG(J364) DA(I386):DT(J363) DC(I387):DG(J362) DT(I388):DA(J361) DG(I389):DC(J360) DG(I390):DC(J359) DC(I391):DG(J358) DC(I392):DG(J357) DG(I393):DC(J356) DC(I394):DG(J355) DC(I395):DG(J354) DT(I396):DA(J353) DG(I397):DC(J352) DG(I398):DC(J351) DA(I399):DT(J350) DG(I400):DC(J349) DA(I401):DT(J348) DA(I402):DT(J347) DT(I403):DA(J346) DC(I404):DG(J345) DC(I405):DG(J344) DC(I406):DG(J343) DG(I407):DC(J342) DG(I408):DC(J341) DT(I409):DA(J340) DG(I410):DC(J339) DC(I411):DG(J338) DC(I412):DG(J337) DG(I413):DC(J336) DA(I414):DT(J335) DG(I415):DC(J334) DG(I416):DC(J333) DC(I417):DG(J332) DC(I418):DG(J331) DG(I419):DC(J330) DC(I420):DG(J329) DT(I421):DA(J328) DC(I422):DG(J327) DA(I423):DT(J326) DA(I424):DT(J325) DT(I425):DA(J324) DT(I426):DA(J323) DG(I427):DC(J322) DG(I428):DC(J321) DT(I429):DA(J320) DC(I430):DG(J319) DG(I431):DC(J318) DT(I432):DA(J317) DA(I433):DT(J316) DG(I434):DC(J315) DA(I435):DT(J314) DC(I436):DG(J313) DA(I437):DT(J312) DG(I438):DC(J311) DC(I439):DG(J310) DT(I440):DA(J309) DC(I441):DG(J308) DT(I442):DA(J307) DA(I443):DT(J306) DG(I444):DC(J305) DC(I445):DG(J304) DA(I446):DT(J303) DC(I447):DG(J302) DC(I448):DG(J301) DG(I449):DC(J300) DC(I450):DG(J299) DT(I451):DA(J298) DT(I452):DA(J297) DA(I453):DT(J296) DA(I455):DT(J295) DC(I456):DG(J293) DG(I457):DC(J292) DC(I458):DG(J291) DA(I459):DT(J290) DC(I460):DG(J289) DG(I461):DC(J288) DT(I462):DA(J287) DA(I463):DT(J286) DC(I464):DG(J285) DG(I465):DC(J284) DC(I466):DG(J283) DG(I467):DC(J282) DC(I468):DG(J281) DT(I469):DA(J280) DG(I470):DC(J279) DT(I471):DA(J278) DC(I472):DG(J277) DC(I473):DG(J276) DC(I474):DG(J275) DC(I475):DG(J274) DC(I476):DG(J273) DG(I477):DC(J272) DC(I478):DG(J271) DG(I479):DC(J270) DT(I480):DA(J269) DT(I481):DA(J268) DT(I482):DA(J267) DT(I483):DA(J266) DA(I484):DT(J265) DA(I485):DT(J264) DC(I486):DG(J263) DC(I487):DG(J262) DG(I488):DC(J261) DC(I489):DG(J260) DC(I490):DG(J259) DA(I491):DT(J258) DA(I492):DT(J257) DG(I493):DC(J256) DG(I494):DC(J255) DG(I495):DC(J254) DG(I496):DC(J253) DA(I497):DT(J252) DT(I498):DA(J251) DT(I499):DA(J250) DA(I500):DT(J249) DC(I501):DG(J248) DT(I502):DA(J247) DC(I503):DG(J246) DC(I504):DG(J245) DC(I505):DG(J244) DT(I506):DA(J243) DA(I507):DT(J242) DG(I508):DC(J241) DT(I509):DA(J240) DC(I510):DG(J239) DT(I511):DA(J238) DC(I512):DG(J237) DC(I513):DG(J236) DA(I514):DT(J235) DG(I515):DC(J234) DG(I516):DC(J233) DC(I517):DG(J232) DA(I518):DT(J231) DC(I519):DG(J230) DG(I520):DC(J229) DT(I521):DA(J228) DG(I522):DC(J227) DT(I523):DA(J226) DC(I524):DG(J225) DA(I525):DT(J224) DG(I526):DC(J223) DA(I527):DT(J222) DT(I528):DA(J221) DA(I529):DT(J220) DT(I530):DA(J219) DA(I531):DT(J218) DT(I532):DA(J217) DA(I533):DT(J216) DC(I534):DG(J215) DA(I535):DT(J214) DT(I536):DA(J213) DC(I537):DG(J212) DC(I538):DG(J211) DT(I539):DA(J210) DG(I540):DC(J209) DT(I541):DA(J208) DC(I542):DG(J207) DA(I543):DT(J206) DT(I544):DA(J205) DG(I545):DC(J204) DT(I546):DA(J203) DA(I547):DT(J202) DA(I548):DT(J201) DG(I549):DC(J200) DT(I550):DA(J199) DA(I551):DT(J198) chainK ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 1) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/KrsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kRsrkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7pf4_P:Histone-fold; title=NUCLEOSOME 3 OF THE 4X187 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DC(I385):DG(J364) DA(I386):DT(J363) DC(I387):DG(J362) DT(I388):DA(J361) DG(I389):DC(J360) DG(I390):DC(J359) DC(I391):DG(J358) DC(I392):DG(J357) DG(I393):DC(J356) DC(I394):DG(J355) DC(I395):DG(J354) DT(I396):DA(J353) DG(I397):DC(J352) DG(I398):DC(J351) DA(I399):DT(J350) DG(I400):DC(J349) DA(I401):DT(J348) DA(I402):DT(J347) DT(I403):DA(J346) DC(I404):DG(J345) DC(I405):DG(J344) DC(I406):DG(J343) DG(I407):DC(J342) DG(I408):DC(J341) DT(I409):DA(J340) DG(I410):DC(J339) DC(I411):DG(J338) DC(I412):DG(J337) DG(I413):DC(J336) DA(I414):DT(J335) DG(I415):DC(J334) DG(I416):DC(J333) DC(I417):DG(J332) DC(I418):DG(J331) DG(I419):DC(J330) DC(I420):DG(J329) DT(I421):DA(J328) DC(I422):DG(J327) DA(I423):DT(J326) DA(I424):DT(J325) DT(I425):DA(J324) DT(I426):DA(J323) DG(I427):DC(J322) DG(I428):DC(J321) DT(I429):DA(J320) DC(I430):DG(J319) DG(I431):DC(J318) DT(I432):DA(J317) DA(I433):DT(J316) DG(I434):DC(J315) DA(I435):DT(J314) DC(I436):DG(J313) DA(I437):DT(J312) DG(I438):DC(J311) DC(I439):DG(J310) DT(I440):DA(J309) DC(I441):DG(J308) DT(I442):DA(J307) DA(I443):DT(J306) DG(I444):DC(J305) DC(I445):DG(J304) DA(I446):DT(J303) DC(I447):DG(J302) DC(I448):DG(J301) DG(I449):DC(J300) DC(I450):DG(J299) DT(I451):DA(J298) DT(I452):DA(J297) DA(I453):DT(J296) DA(I455):DT(J295) DC(I456):DG(J293) DG(I457):DC(J292) DC(I458):DG(J291) DA(I459):DT(J290) DC(I460):DG(J289) DG(I461):DC(J288) DT(I462):DA(J287) DA(I463):DT(J286) DC(I464):DG(J285) DG(I465):DC(J284) DC(I466):DG(J283) DG(I467):DC(J282) DC(I468):DG(J281) DT(I469):DA(J280) DG(I470):DC(J279) DT(I471):DA(J278) DC(I472):DG(J277) DC(I473):DG(J276) DC(I474):DG(J275) DC(I475):DG(J274) DC(I476):DG(J273) DG(I477):DC(J272) DC(I478):DG(J271) DG(I479):DC(J270) DT(I480):DA(J269) DT(I481):DA(J268) DT(I482):DA(J267) DT(I483):DA(J266) DA(I484):DT(J265) DA(I485):DT(J264) DC(I486):DG(J263) DC(I487):DG(J262) DG(I488):DC(J261) DC(I489):DG(J260) DC(I490):DG(J259) DA(I491):DT(J258) DA(I492):DT(J257) DG(I493):DC(J256) DG(I494):DC(J255) DG(I495):DC(J254) DG(I496):DC(J253) DA(I497):DT(J252) DT(I498):DA(J251) DT(I499):DA(J250) DA(I500):DT(J249) DC(I501):DG(J248) DT(I502):DA(J247) DC(I503):DG(J246) DC(I504):DG(J245) DC(I505):DG(J244) DT(I506):DA(J243) DA(I507):DT(J242) DG(I508):DC(J241) DT(I509):DA(J240) DC(I510):DG(J239) DT(I511):DA(J238) DC(I512):DG(J237) DC(I513):DG(J236) DA(I514):DT(J235) DG(I515):DC(J234) DG(I516):DC(J233) DC(I517):DG(J232) DA(I518):DT(J231) DC(I519):DG(J230) DG(I520):DC(J229) DT(I521):DA(J228) DG(I522):DC(J227) DT(I523):DA(J226) DC(I524):DG(J225) DA(I525):DT(J224) DG(I526):DC(J223) DA(I527):DT(J222) DT(I528):DA(J221) DA(I529):DT(J220) DT(I530):DA(J219) DA(I531):DT(J218) DT(I532):DA(J217) DA(I533):DT(J216) DC(I534):DG(J215) DA(I535):DT(J214) DT(I536):DA(J213) DC(I537):DG(J212) DC(I538):DG(J211) DT(I539):DA(J210) DG(I540):DC(J209) DT(I541):DA(J208) DC(I542):DG(J207) DA(I543):DT(J206) DT(I544):DA(J205) DG(I545):DC(J204) DT(I546):DA(J203) DA(I547):DT(J202) DA(I548):DT(J201) DG(I549):DC(J200) DT(I550):DA(J199) DA(I551):DT(J198) chainP ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >7pfa_A:Histone-fold; title=TRINUCLEOSOME OF THE 4X197 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DG(I16):DC(J773) DG(I17):DC(J772) DC(I18):DG(J771) DC(I19):DG(J770) DG(I20):DC(J769) DC(I21):DG(J768) DC(I22):DG(J767) DA(I23):DT(J766) DT(I24):DA(J765) DA(I25):DT(J764) DC(I26):DG(J763) DT(I27):DA(J762) DG(I28):DC(J761) DG(I29):DC(J760) DA(I30):DT(J759) DG(I31):DC(J758) DA(I32):DT(J757) DA(I33):DT(J756) DT(I34):DA(J755) DC(I35):DG(J754) DC(I36):DG(J753) DC(I37):DG(J752) DG(I38):DC(J751) DG(I39):DC(J750) DT(I40):DA(J749) DG(I41):DC(J748) DC(I42):DG(J747) DC(I43):DG(J746) DG(I44):DC(J745) DA(I45):DT(J744) DG(I46):DC(J743) DG(I47):DC(J742) DC(I48):DG(J741) DC(I49):DG(J740) DG(I50):DC(J739) DC(I51):DG(J738) DT(I52):DA(J737) DC(I53):DG(J736) DA(I54):DT(J735) DA(I55):DT(J734) DT(I56):DA(J733) DT(I57):DA(J732) DG(I58):DC(J731) DG(I59):DC(J730) DT(I60):DA(J729) DC(I61):DG(J728) DG(I62):DC(J727) DT(I63):DA(J726) DA(I64):DT(J725) DG(I65):DC(J724) DA(I66):DT(J723) DC(I67):DG(J722) DA(I68):DT(J721) DG(I69):DC(J720) DC(I70):DG(J719) DT(I71):DA(J718) DC(I72):DG(J717) DT(I73):DA(J716) DA(I74):DT(J715) DG(I75):DC(J714) DC(I76):DG(J713) DA(I77):DT(J712) DC(I78):DG(J711) DC(I79):DG(J710) DG(I80):DC(J709) DC(I81):DG(J708) DT(I82):DA(J707) DT(I83):DA(J706) DA(I84):DT(J705) DA(I85):DT(J704) DA(I86):DT(J703) DC(I87):DG(J702) DG(I88):DC(J701) DC(I89):DG(J700) DA(I90):DT(J699) DC(I91):DG(J698) DG(I92):DC(J697) DT(I93):DA(J696) DA(I94):DT(J695) DC(I95):DG(J694) DG(I96):DC(J693) DC(I97):DG(J692) DG(I98):DC(J691) DC(I99):DG(J690) DT(I100):DA(J689) DG(I101):DC(J688) DT(I102):DA(J687) DC(I103):DG(J686) DC(I104):DG(J685) DC(I105):DG(J684) DC(I106):DG(J683) DC(I107):DG(J682) DG(I108):DC(J681) DC(I109):DG(J680) DG(I110):DC(J679) DT(I111):DA(J678) DT(I112):DA(J677) DT(I113):DA(J676) DT(I114):DA(J675) DA(I115):DT(J674) DA(I116):DT(J673) DC(I117):DG(J672) DC(I118):DG(J671) DG(I119):DC(J670) DC(I120):DG(J669) DC(I121):DG(J668) DA(I122):DT(J667) DA(I123):DT(J666) DG(I124):DC(J665) DG(I125):DC(J664) DG(I126):DC(J663) DG(I127):DC(J662) DA(I128):DT(J661) DT(I129):DA(J660) DT(I130):DA(J659) DA(I131):DT(J658) DC(I132):DG(J657) DT(I133):DA(J656) DC(I134):DG(J655) DC(I135):DG(J654) DC(I136):DG(J653) DT(I137):DA(J652) DA(I138):DT(J651) DG(I139):DC(J650) DT(I140):DA(J649) DC(I141):DG(J648) DT(I142):DA(J647) DC(I143):DG(J646) DC(I144):DG(J645) DA(I145):DT(J644) DG(I146):DC(J643) DG(I147):DC(J642) DC(I148):DG(J641) DA(I149):DT(J640) DC(I150):DG(J639) DG(I151):DC(J638) DT(I152):DA(J637) DG(I153):DC(J636) DT(I154):DA(J635) DC(I155):DG(J634) DA(I156):DT(J633) DG(I157):DC(J632) DA(I158):DT(J631) DT(I159):DA(J630) DA(I160):DT(J629) DT(I161):DA(J628) DA(I162):DT(J627) DT(I163):DA(J626) DA(I164):DT(J625) DC(I165):DG(J624) DA(I166):DT(J623) DT(I167):DA(J622) DC(I168):DG(J621) DC(I169):DG(J620) DT(I170):DA(J619) DG(I171):DC(J618) DT(I172):DA(J617) DC(I173):DG(J616) DA(I174):DT(J615) DT(I175):DA(J614) DG(I176):DC(J613) DA(I178):DT(J611) DA(I179):DT(J610) DG(I180):DC(J609) DT(I181):DA(J608) DT(I183):DT(J607) DT(I184):DA(J606) DT(J604):DA(J605) DA(I186):DT(J603) DG(I187):DC(J602) DG(I188):DC(J601) DT(I189):DA(J600) DA(I190):DT(J599) DA(I191):DT(J598) DC(I192):DG(J597) DC(I193):DG(J596) DC(I194):DG(J595) DA(I195):DT(J594) DG(I196):DC(J593) DT(I197):DA(J592) DA(I198):DT(J591) DC(I199):DG(J590) DT(I200):DA(J589) DG(I201):DC(J588) DT(I202):DA(J587) DC(I203):DG(J586) DT(I204):DA(J585) DC(I205):DG(J584) DC(I207):DG(J582) DG(I208):DC(J581) DC(I209):DG(J580) DA(I210):DT(J579) DC(I211):DG(J578) DT(I212):DA(J577) DG(I213):DC(J576) DG(I214):DC(J575) DC(I215):DG(J574) DC(I216):DG(J573) DG(I217):DC(J572) DC(I218):DG(J571) DC(I219):DG(J570) DA(I220):DT(J569) DT(I221):DA(J568) DA(I222):DT(J567) DC(I223):DG(J566) DT(I224):DA(J565) DG(I225):DC(J564) DG(I226):DC(J563) DA(I227):DT(J562) DG(I228):DC(J561) DA(I229):DT(J560) DA(I230):DT(J559) DT(I231):DA(J558) DC(I232):DG(J557) DC(I233):DG(J556) DC(I234):DG(J555) DG(I235):DC(J554) DG(I236):DC(J553) DT(I237):DA(J552) DG(I238):DC(J551) DC(I239):DG(J550) DC(I240):DG(J549) DG(I241):DC(J548) DA(I242):DT(J547) DG(I243):DC(J546) DG(I244):DC(J545) DC(I245):DG(J544) DC(I246):DG(J543) DG(I247):DC(J542) DC(I248):DG(J541) DT(I249):DA(J540) DC(I250):DG(J539) DA(I251):DT(J538) DA(I252):DT(J537) DT(I253):DA(J536) DT(I254):DA(J535) DG(I255):DC(J534) DG(I256):DC(J533) DT(I257):DA(J532) DC(I258):DG(J531) DG(I259):DC(J530) DT(I260):DA(J529) DA(I261):DT(J528) DG(I262):DC(J527) DA(I263):DT(J526) DC(I264):DG(J525) DA(I265):DT(J524) DG(I266):DC(J523) DC(I267):DG(J522) DT(I268):DA(J521) DC(I269):DG(J520) DT(I270):DA(J519) DA(I271):DT(J518) DG(I272):DC(J517) DC(I273):DG(J516) DA(I274):DT(J515) DC(I275):DG(J514) DC(I276):DG(J513) DG(I277):DC(J512) DC(I278):DG(J511) DT(I279):DA(J510) DT(I280):DA(J509) DA(I281):DT(J508) DA(I282):DT(J507) DA(I283):DT(J506) DC(I284):DG(J505) DG(I285):DC(J504) DC(I286):DG(J503) DA(I287):DT(J502) DC(I288):DG(J501) DG(I289):DC(J500) DT(I290):DA(J499) DA(I291):DT(J498) DC(I292):DG(J497) DG(I293):DC(J496) DC(I294):DG(J495) DG(I295):DC(J494) DC(I296):DG(J493) DT(I297):DA(J492) DG(I298):DC(J491) DT(I299):DA(J490) DC(I300):DG(J489) DC(I301):DG(J488) DC(I302):DG(J487) DC(I303):DG(J486) DC(I304):DG(J485) DG(I305):DC(J484) DC(I306):DG(J483) DG(I307):DC(J482) DT(I308):DA(J481) DT(I309):DA(J480) DT(I310):DA(J479) DT(I311):DA(J478) DA(I312):DT(J477) DA(I313):DT(J476) DC(I314):DG(J475) DC(I315):DG(J474) DG(I316):DC(J473) DC(I317):DG(J472) DC(I318):DG(J471) DA(I319):DT(J470) DA(I320):DT(J469) DG(I321):DC(J468) DG(I322):DC(J467) DG(I323):DC(J466) DG(I324):DC(J465) DA(I325):DT(J464) DT(I326):DA(J463) DT(I327):DA(J462) DA(I328):DT(J461) DC(I329):DG(J460) DT(I330):DA(J459) DC(I331):DG(J458) DC(I332):DG(J457) DC(I333):DG(J456) DT(I334):DA(J455) DA(I335):DT(J454) DG(I336):DC(J453) DT(I337):DA(J452) DC(I338):DG(J451) DT(I339):DA(J450) DC(I340):DG(J449) DC(I341):DG(J448) DA(I342):DT(J447) DG(I343):DC(J446) DG(I344):DC(J445) DC(I345):DG(J444) DA(I346):DT(J443) DC(I347):DG(J442) DG(I348):DC(J441) DT(I349):DA(J440) DG(I350):DC(J439) DT(I351):DA(J438) DC(I352):DG(J437) DA(I353):DT(J436) DG(I354):DC(J435) DA(I355):DT(J434) DT(I356):DA(J433) DA(I357):DT(J432) DT(I358):DA(J431) DA(I359):DT(J430) DT(I360):DA(J429) DA(I361):DT(J428) DC(I362):DG(J427) DA(I363):DT(J426) DT(I364):DA(J425) DC(I365):DG(J424) DT(I367):DA(J422) DG(I368):DC(J421) DT(I369):DA(J420) DC(I370):DG(J419) DA(I371):DT(J418) DT(I372):DA(J417) DT(I374):DA(J415) DA(I375):DT(J414) DA(I376):DT(J413) DG(I377):DC(J412) DA(I379):DT(J410) DT(I380):DA(J409) DT(I381):DA(J408) DA(I382):DT(J407) DA(I383):DT(J406) DG(I384):DC(J405) DG(I385):DC(J404) DT(I386):DA(J403) DA(I387):DT(J402) DA(I388):DT(J401) DC(I389):DG(J400) DC(I390):DG(J399) DC(I391):DG(J398) DA(I392):DT(J397) DG(I393):DC(J396) DT(I394):DA(J395) DA(I395):DT(J394) DC(I396):DG(J393) DT(I397):DA(J392) DG(I398):DC(J391) DT(I399):DA(J390) DC(I400):DG(J389) DT(I401):DA(J388) DC(I402):DG(J387) DG(I403):DC(J386) DC(I404):DG(J385) DG(I405):DC(J384) DC(I406):DG(J383) DA(I407):DT(J382) DC(I408):DG(J381) DT(I409):DA(J380) DG(I410):DC(J379) DG(I411):DC(J378) DC(I412):DG(J377) DC(I413):DG(J376) DG(I414):DC(J375) DC(I415):DG(J374) DC(I416):DG(J373) DA(I417):DT(J372) DT(I418):DA(J371) DA(I419):DT(J370) DC(I420):DG(J369) DT(I421):DA(J368) DG(I422):DC(J367) DG(I423):DC(J366) DA(I424):DT(J365) DG(I425):DC(J364) DA(I426):DT(J363) DA(I427):DT(J362) DT(I428):DA(J361) DC(I429):DG(J360) DC(I430):DG(J359) DC(I431):DG(J358) DG(I432):DC(J357) DG(I433):DC(J356) DT(I434):DA(J355) DG(I435):DC(J354) DC(I436):DG(J353) DC(I437):DG(J352) DG(I438):DC(J351) DA(I439):DT(J350) DG(I440):DC(J349) DG(I441):DC(J348) DC(I442):DG(J347) DC(I443):DG(J346) DG(I444):DC(J345) DC(I445):DG(J344) DT(I446):DA(J343) DC(I447):DG(J342) DA(I448):DT(J341) DA(I449):DT(J340) DT(I450):DA(J339) DT(I451):DA(J338) DG(I452):DC(J337) DG(I453):DC(J336) DT(I454):DA(J335) DC(I455):DG(J334) DG(I456):DC(J333) DT(I457):DA(J332) DA(I458):DT(J331) DG(I459):DC(J330) DA(I460):DT(J329) DC(I461):DG(J328) DA(I462):DT(J327) DG(I463):DC(J326) DC(I464):DG(J325) DT(I465):DA(J324) DC(I466):DG(J323) DT(I467):DA(J322) DA(I468):DT(J321) DG(I469):DC(J320) DC(I470):DG(J319) DA(I471):DT(J318) DC(I472):DG(J317) DC(I473):DG(J316) DG(I474):DC(J315) DC(I475):DG(J314) DT(I476):DA(J313) DT(I477):DA(J312) DA(I478):DT(J311) DA(I480):DT(J310) DC(I481):DG(J308) DG(I482):DC(J307) DC(I483):DG(J306) DA(I484):DT(J305) DC(I485):DG(J304) DG(I486):DC(J303) DT(I487):DA(J302) DA(I488):DT(J301) DC(I489):DG(J300) DG(I490):DC(J299) DC(I491):DG(J298) DG(I492):DC(J297) DC(I493):DG(J296) DT(I494):DA(J295) DG(I495):DC(J294) DT(I496):DA(J293) DC(I497):DG(J292) DC(I498):DG(J291) DC(I499):DG(J290) DC(I500):DG(J289) DC(I501):DG(J288) DG(I502):DC(J287) DC(I503):DG(J286) DG(I504):DC(J285) DT(I505):DA(J284) DT(I506):DA(J283) DT(I507):DA(J282) DT(I508):DA(J281) DA(I509):DT(J280) DA(I510):DT(J279) DC(I511):DG(J278) DC(I512):DG(J277) DG(I513):DC(J276) DC(I514):DG(J275) DC(I515):DG(J274) DA(I516):DT(J273) DA(I517):DT(J272) DG(I518):DC(J271) DG(I519):DC(J270) DG(I520):DC(J269) DG(I521):DC(J268) DA(I522):DT(J267) DT(I523):DA(J266) DT(I524):DA(J265) DA(I525):DT(J264) DC(I526):DG(J263) DT(I527):DA(J262) DC(I528):DG(J261) DC(I529):DG(J260) DC(I530):DG(J259) DT(I531):DA(J258) DA(I532):DT(J257) DG(I533):DC(J256) DT(I534):DA(J255) DC(I535):DG(J254) DT(I536):DA(J253) DC(I537):DG(J252) DC(I538):DG(J251) DA(I539):DT(J250) DG(I540):DC(J249) DG(I541):DC(J248) DC(I542):DG(J247) DA(I543):DT(J246) DC(I544):DG(J245) DG(I545):DC(J244) DT(I546):DA(J243) DG(I547):DC(J242) DT(I548):DA(J241) DC(I549):DG(J240) DA(I550):DT(J239) DG(I551):DC(J238) DA(I552):DT(J237) DT(I553):DA(J236) DA(I554):DT(J235) DT(I555):DA(J234) DA(I556):DT(J233) DT(I557):DA(J232) DA(I558):DT(J231) DC(I559):DG(J230) DA(I560):DT(J229) DT(I561):DA(J228) DC(I562):DG(J227) DC(I563):DG(J226) DT(I564):DA(J225) DG(I565):DC(J224) DT(I566):DA(J223) DC(I567):DG(J222) DA(I568):DT(J221) DT(I569):DA(J220) DG(I570):DC(J219) DT(I571):DA(J218) DA(I572):DT(J217) DA(I573):DT(J216) DG(I574):DC(J215) DT(I575):DA(J214) DA(I576):DT(J213) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge >7pfc_G:Histone-fold; title=NUCLEOSOME STACK OF THE 4X197 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DT(J213):DA(I575) DA(J214):DT(I574) DC(J215):DG(I573) DT(J216):DA(I572) DT(J217):DA(I571) DA(J218):DG(I569) DA(J220):DT(I568) DT(J221):DA(I567) DG(J222):DC(I566) DA(J223):DT(I565) DC(J224):DG(I564) DA(J225):DT(I563) DG(J226):DC(I562) DG(J227):DC(I561) DA(J228):DT(I560) DT(J229):DA(I559) DG(J230):DC(I558) DT(J231):DA(I557) DA(J232):DT(I556) DT(J233):DA(I555) DA(J234):DT(I554) DA(J236):DA(I553) DT(J237):DA(I551) DC(J238):DG(I550) DT(J239):DA(I549) DG(J240):DC(I548) DA(J241):DT(I547) DC(J242):DG(I546) DA(J243):DT(I545) DC(J244):DG(I544) DG(J245):DC(I543) DG(J247):DC(I541) DC(J248):DG(I540) DC(J249):DG(I539) DT(J250):DA(I538) DG(J251):DC(I537) DG(J252):DC(I536) DA(J253):DT(I535) DG(J254):DC(I534) DA(J255):DT(I533) DC(J256):DG(I532) DT(J257):DA(I531) DA(J258):DT(I530) DG(J259):DC(I529) DG(J260):DC(I528) DG(J261):DC(I527) DA(J262):DT(I526) DG(J263):DC(I525) DT(J264):DA(I524) DA(J265):DT(I523) DA(J266):DT(I522) DT(J267):DA(I521) DC(J268):DG(I520) DC(J269):DG(I519) DC(J270):DG(I518) DC(J271):DG(I517) DT(J272):DA(I516) DT(J273):DA(I515) DG(J274):DC(I514) DG(J275):DC(I513) DC(J276):DG(I512) DG(J277):DC(I511) DG(J278):DC(I510) DT(J279):DA(I509) DT(J280):DA(I508) DA(J281):DT(I507) DA(J282):DT(I506) DA(J283):DT(I504) DA(J284):DG(I503) DC(J285):DC(I502) DC(J287):DG(I501) DG(J288):DC(I500) DG(J289):DC(I499) DG(J290):DC(I498) DG(J291):DC(I497) DG(J292):DC(I496) DA(J293):DG(I494) DA(J295):DC(I492) DG(J296):DG(I491) DG(J298):DC(I490) DC(J299):DG(I489) DT(J301):DA(I487) DA(J302):DT(I486) DC(J303):DG(I485) DG(J304):DC(I484) DT(J305):DA(I483) DG(J306):DC(I482) DG(J308):DG(I481) DT(J309):DC(I480) DT(J310):DA(I478) DT(J311):DA(I477) DA(J312):DT(I476) DA(J313):DT(I475) DG(J314):DC(I474) DC(J315):DG(I473) DG(J316):DC(I472) DG(J317):DC(I471) DT(J318):DA(I470) DC(J320):DG(I468) DT(J321):DA(I467) DA(J322):DT(I466) DG(J323):DC(I465) DA(J324):DT(I464) DG(J325):DC(I463) DC(J326):DG(I462) DT(J327):DA(I461) DT(J329):DA(I459) DC(J330):DG(I458) DT(J331):DT(I456) DA(J332):DG(I455) DC(J333):DC(I454) DG(J334):DT(I453) DA(J335):DG(I452) DC(J337):DG(I451) DA(J338):DT(I450) DA(J339):DT(I449) DT(J340):DA(I448) DT(J341):DA(I447) DG(J342):DC(I446) DA(J343):DT(I445) DG(J344):DC(I444) DC(J345):DG(I443) DG(J346):DC(I442) DG(J347):DC(I441) DC(J348):DG(I440) DC(J349):DG(I439) DT(J350):DA(I438) DC(J351):DG(I437) DG(J352):DC(I436) DG(J353):DC(I435) DC(J354):DG(I434) DA(J355):DT(I433) DC(J356):DG(I432) DC(J357):DG(I431) DG(J358):DC(I430) DG(J359):DC(I429) DG(J360):DC(I428) DA(J361):DT(I427) DT(J362):DA(I426) DT(J363):DA(I425) DC(J364):DG(I424) DT(J365):DA(I423) DC(J366):DG(I422) DC(J367):DG(I421) DA(J368):DT(I420) DG(J369):DC(I419) DT(J370):DA(I418) DA(J371):DT(I417) DT(J372):DA(I416) DG(J373):DC(I415) DG(J374):DC(I414) DC(J375):DG(I413) DG(J376):DC(I412) DG(J377):DG(I410) DC(J379):DG(I409) DA(J380):DT(I408) DG(J381):DC(I407) DT(J382):DA(I406) DG(J383):DC(I405) DC(J602):DG(I187) DT(J603):DA(I186) DT(J604):DA(I185) DA(J605):DT(I184) DA(J606):DT(I183) DA(J608):DT(I181) DC(J609):DG(I180) DT(J610):DA(I179) DT(J611):DA(I178) DA(J612):DT(I177) DC(J613):DG(I176) DA(J614):DT(I175) DT(J615):DA(I174) DG(J616):DC(I173) DA(J617):DT(I172) DC(J618):DG(I171) DA(J619):DT(I170) DG(J620):DC(I169) DG(J621):DC(I168) DA(J622):DT(I167) DT(J623):DA(I166) DG(J624):DC(I165) DT(J625):DA(I164) DA(J626):DT(I163) DT(J627):DA(I162) DA(J628):DT(I161) DT(J629):DA(I160) DA(J630):DT(I159) DT(J631):DA(I158) DC(J632):DG(I157) DT(J633):DA(I156) DG(J634):DC(I155) DA(J635):DT(I154) DC(J636):DG(I153) DA(J637):DT(I152) DC(J638):DG(I151) DG(J639):DC(I150) DT(J640):DA(I149) DG(J641):DC(I148) DC(J642):DG(I147) DC(J643):DG(I146) DT(J644):DA(I145) DG(J645):DC(I144) DG(J646):DC(I143) DA(J647):DT(I142) DG(J648):DC(I141) DA(J649):DT(I140) DC(J650):DG(I139) DT(J651):DA(I138) DA(J652):DT(I137) DG(J653):DC(I136) DG(J654):DC(I135) DG(J655):DC(I134) DA(J656):DT(I133) DG(J657):DC(I132) DT(J658):DA(I131) DA(J659):DT(I130) DA(J660):DT(I129) DT(J661):DA(I128) DC(J662):DG(I127) DC(J663):DG(I126) DC(J664):DG(I125) DC(J665):DG(I124) DT(J666):DA(I123) DT(J667):DA(I122) DG(J668):DC(I121) DG(J669):DC(I120) DC(J670):DG(I119) DG(J671):DC(I118) DG(J672):DC(I117) DT(J673):DA(I116) DT(J674):DA(I115) DA(J675):DT(I114) DA(J676):DT(I113) DA(J677):DT(I112) DA(J678):DT(I111) DC(J679):DG(I110) DG(J680):DC(I109) DC(J681):DG(I108) DG(J682):DC(I107) DG(J683):DC(I106) DG(J684):DC(I105) DG(J685):DC(I104) DG(J686):DC(I103) DA(J687):DT(I102) DC(J688):DG(I101) DA(J689):DT(I100) DG(J690):DC(I99) DC(J691):DG(I98) DG(J692):DC(I97) DC(J693):DG(I96) DG(J694):DC(I95) DT(J695):DA(I94) DA(J696):DT(I93) DC(J697):DG(I92) DG(J698):DC(I91) DT(J699):DA(I90) DG(J700):DC(I89) DC(J701):DG(I88) DG(J702):DC(I87) DT(J703):DA(I86) DT(J704):DA(I85) DT(J705):DA(I84) DA(J706):DT(I83) DA(J707):DT(I82) DG(J708):DC(I81) DC(J709):DG(I80) DG(J710):DC(I79) DG(J711):DC(I78) DT(J712):DA(I77) DG(J713):DC(I76) DC(J714):DG(I75) DT(J715):DA(I74) DA(J716):DT(I73) DG(J717):DC(I72) DA(J718):DT(I71) DG(J719):DC(I70) DC(J720):DG(I69) DT(J721):DA(I68) DG(J722):DC(I67) DT(J723):DA(I66) DC(J724):DG(I65) DT(J725):DA(I64) DA(J726):DT(I63) DC(J727):DG(I62) DG(J728):DC(I61) DA(J729):DT(I60) DC(J730):DG(I59) DC(J731):DG(I58) DA(J732):DT(I57) DA(J733):DT(I56) DT(J734):DA(I55) DT(J735):DA(I54) DG(J736):DC(I53) DA(J737):DT(I52) DG(J738):DC(I51) DC(J739):DG(I50) DG(J740):DC(I49) DG(J741):DC(I48) DC(J742):DG(I47) DC(J743):DG(I46) DT(J744):DA(I45) DC(J745):DG(I44) DG(J746):DC(I43) DG(J747):DC(I42) DC(J748):DG(I41) DA(J749):DT(I40) DC(J750):DG(I39) DC(J751):DG(I38) DG(J752):DC(I37) DG(J753):DC(I36) DG(J754):DC(I35) DA(J755):DT(I34) DT(J756):DA(I33) DT(J757):DA(I32) DC(J758):DG(I31) DT(J759):DA(I30) DC(J760):DG(I29) DC(J761):DG(I28) DA(J762):DT(I27) DG(J763):DC(I26) DT(J764):DA(I25) DA(J765):DT(I24) DT(J766):DA(I23) DG(J767):DC(I22) DG(J768):DC(I21) DC(J769):DG(I20) DG(J770):DC(I19) DG(J771):DC(I18) DC(J772):DG(I17) DC(J773):DG(I16) chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >7pfd_D:Histone-fold; title=NUCLEOSOME 1 OF THE 4X197 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DC(J602):DG(I187) DT(J603):DA(I186) DT(J604):DA(I185) DA(J605):DT(I184) DA(J606):DT(I183) DT(J607):DA(I182) DA(J608):DT(I181) DC(J609):DG(I180) DT(J610):DA(I179) DT(J611):DA(I178) DA(J612):DT(I177) DC(J613):DG(I176) DA(J614):DT(I175) DT(J615):DA(I174) DG(J616):DC(I173) DA(J617):DT(I172) DC(J618):DG(I171) DA(J619):DT(I170) DG(J620):DC(I169) DG(J621):DC(I168) DA(J622):DT(I167) DT(J623):DA(I166) DG(J624):DC(I165) DT(J625):DA(I164) DA(J626):DT(I163) DT(J627):DA(I162) DA(J628):DT(I161) DT(J629):DA(I160) DA(J630):DT(I159) DT(J631):DA(I158) DC(J632):DG(I157) DT(J633):DA(I156) DG(J634):DC(I155) DA(J635):DT(I154) DC(J636):DG(I153) DA(J637):DT(I152) DC(J638):DG(I151) DG(J639):DC(I150) DT(J640):DA(I149) DG(J641):DC(I148) DC(J642):DG(I147) DC(J643):DG(I146) DT(J644):DA(I145) DG(J645):DC(I144) DG(J646):DC(I143) DA(J647):DT(I142) DG(J648):DC(I141) DA(J649):DT(I140) DC(J650):DG(I139) DT(J651):DA(I138) DA(J652):DT(I137) DG(J653):DC(I136) DG(J654):DC(I135) DG(J655):DC(I134) DA(J656):DT(I133) DG(J657):DC(I132) DT(J658):DA(I131) DA(J659):DT(I130) DA(J660):DT(I129) DT(J661):DA(I128) DC(J662):DG(I127) DC(J663):DG(I126) DC(J664):DG(I125) DC(J665):DG(I124) DT(J666):DA(I123) DT(J667):DA(I122) DG(J668):DC(I121) DG(J669):DC(I120) DC(J670):DG(I119) DG(J671):DC(I118) DG(J672):DC(I117) DT(J673):DA(I116) DT(J674):DA(I115) DA(J675):DT(I114) DA(J676):DT(I113) DA(J677):DT(I112) DA(J678):DT(I111) DC(J679):DG(I110) DG(J680):DC(I109) DC(J681):DG(I108) DG(J682):DC(I107) DG(J683):DC(I106) DG(J684):DC(I105) DG(J685):DC(I104) DG(J686):DC(I103) DA(J687):DT(I102) DC(J688):DG(I101) DA(J689):DT(I100) DG(J690):DC(I99) DC(J691):DG(I98) DG(J692):DC(I97) DC(J693):DG(I96) DG(J694):DC(I95) DT(J695):DA(I94) DA(J696):DT(I93) DC(J697):DG(I92) DG(J698):DC(I91) DT(J699):DA(I90) DG(J700):DC(I89) DC(J701):DG(I88) DG(J702):DC(I87) DT(J703):DA(I86) DT(J704):DA(I85) DT(J705):DA(I84) DA(J706):DT(I83) DA(J707):DT(I82) DG(J708):DC(I81) DC(J709):DG(I80) DG(J710):DC(I79) DG(J711):DC(I78) DT(J712):DA(I77) DG(J713):DC(I76) DC(J714):DG(I75) DT(J715):DA(I74) DA(J716):DT(I73) DG(J717):DC(I72) DA(J718):DT(I71) DG(J719):DC(I70) DC(J720):DG(I69) DT(J721):DA(I68) DG(J722):DC(I67) DT(J723):DA(I66) DC(J724):DG(I65) DT(J725):DA(I64) DA(J726):DT(I63) DC(J727):DG(I62) DG(J728):DC(I61) DA(J729):DT(I60) DC(J730):DG(I59) DC(J731):DG(I58) DA(J732):DT(I57) DA(J733):DT(I56) DT(J734):DA(I55) DT(J735):DA(I54) DG(J736):DC(I53) DA(J737):DT(I52) DG(J738):DC(I51) DC(J739):DG(I50) DG(J740):DC(I49) DG(J741):DC(I48) DC(J742):DG(I47) DC(J743):DG(I46) DT(J744):DA(I45) DC(J745):DG(I44) DG(J746):DC(I43) DG(J747):DC(I42) DC(J748):DG(I41) DA(J749):DT(I40) DC(J750):DG(I39) DC(J751):DG(I38) DG(J752):DC(I37) DG(J753):DC(I36) DG(J754):DC(I35) DA(J755):DT(I34) DT(J756):DA(I33) DT(J757):DA(I32) DC(J758):DG(I31) DT(J759):DA(I30) DC(J760):DG(I29) DC(J761):DG(I28) DA(J762):DT(I27) DG(J763):DC(I26) DT(J764):DA(I25) DA(J765):DT(I24) DT(J766):DA(I23) DG(J767):DC(I22) DG(J768):DC(I21) DC(J769):DG(I20) DG(J770):DC(I19) DG(J771):DC(I18) DC(J772):DG(I17) DC(J773):DG(I16) chainD ( 1) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KrsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7pfe_d:Histone-fold; title=NUCLEOSOME 2 OF THE 4X197 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DC(J405):DG(I384) DT(J406):DA(I383) DT(J407):DA(I382) DA(J408):DT(I381) DA(J409):DT(I380) DT(J410):DA(I379) DA(J411):DT(I378) DC(J412):DG(I377) DT(J413):DA(I376) DT(J414):DA(I375) DA(J415):DT(I374) DC(J416):DG(I373) DA(J417):DT(I372) DT(J418):DA(I371) DG(J419):DC(I370) DA(J420):DT(I369) DC(J421):DG(I368) DA(J422):DT(I367) DG(J423):DC(I366) DG(J424):DC(I365) DA(J425):DT(I364) DT(J426):DA(I363) DG(J427):DC(I362) DT(J428):DA(I361) DA(J429):DT(I360) DT(J430):DA(I359) DA(J431):DT(I358) DT(J432):DA(I357) DA(J433):DT(I356) DT(J434):DA(I355) DC(J435):DG(I354) DT(J436):DA(I353) DG(J437):DC(I352) DA(J438):DT(I351) DC(J439):DG(I350) DA(J440):DT(I349) DC(J441):DG(I348) DG(J442):DC(I347) DT(J443):DA(I346) DG(J444):DC(I345) DC(J445):DG(I344) DC(J446):DG(I343) DT(J447):DA(I342) DG(J448):DC(I341) DG(J449):DC(I340) DA(J450):DT(I339) DG(J451):DC(I338) DA(J452):DT(I337) DC(J453):DG(I336) DT(J454):DA(I335) DA(J455):DT(I334) DG(J456):DC(I333) DG(J457):DC(I332) DG(J458):DC(I331) DA(J459):DT(I330) DG(J460):DC(I329) DT(J461):DA(I328) DA(J462):DT(I327) DA(J463):DT(I326) DT(J464):DA(I325) DC(J465):DG(I324) DC(J466):DG(I323) DC(J467):DG(I322) DC(J468):DG(I321) DT(J469):DA(I320) DT(J470):DA(I319) DG(J471):DC(I318) DG(J472):DC(I317) DC(J473):DG(I316) DG(J474):DC(I315) DG(J475):DC(I314) DT(J476):DA(I313) DT(J477):DA(I312) DA(J478):DT(I311) DA(J479):DT(I310) DA(J480):DT(I309) DA(J481):DT(I308) DC(J482):DG(I307) DG(J483):DC(I306) DC(J484):DG(I305) DG(J485):DC(I304) DG(J486):DC(I303) DG(J487):DC(I302) DG(J488):DC(I301) DG(J489):DC(I300) DA(J490):DT(I299) DC(J491):DG(I298) DA(J492):DT(I297) DG(J493):DC(I296) DC(J494):DG(I295) DG(J495):DC(I294) DC(J496):DG(I293) DG(J497):DC(I292) DT(J498):DA(I291) DA(J499):DT(I290) DC(J500):DG(I289) DG(J501):DC(I288) DT(J502):DA(I287) DG(J503):DC(I286) DC(J504):DG(I285) DG(J505):DC(I284) DT(J506):DA(I283) DT(J507):DA(I282) DT(J508):DA(I281) DA(J509):DT(I280) DA(J510):DT(I279) DG(J511):DC(I278) DC(J512):DG(I277) DG(J513):DC(I276) DG(J514):DC(I275) DT(J515):DA(I274) DG(J516):DC(I273) DC(J517):DG(I272) DT(J518):DA(I271) DA(J519):DT(I270) DG(J520):DC(I269) DA(J521):DT(I268) DG(J522):DC(I267) DC(J523):DG(I266) DT(J524):DA(I265) DG(J525):DC(I264) DT(J526):DA(I263) DC(J527):DG(I262) DT(J528):DA(I261) DA(J529):DT(I260) DC(J530):DG(I259) DG(J531):DC(I258) DA(J532):DT(I257) DC(J533):DG(I256) DC(J534):DG(I255) DA(J535):DT(I254) DA(J536):DT(I253) DT(J537):DA(I252) DT(J538):DA(I251) DG(J539):DC(I250) DA(J540):DT(I249) DG(J541):DC(I248) DC(J542):DG(I247) DG(J543):DC(I246) DG(J544):DC(I245) DC(J545):DG(I244) DC(J546):DG(I243) DT(J547):DA(I242) DC(J548):DG(I241) DG(J549):DC(I240) DG(J550):DC(I239) DC(J551):DG(I238) DA(J552):DT(I237) DC(J553):DG(I236) DC(J554):DG(I235) DG(J555):DC(I234) DG(J556):DC(I233) DG(J557):DC(I232) DA(J558):DT(I231) DT(J559):DA(I230) DT(J560):DA(I229) DC(J561):DG(I228) DT(J562):DA(I227) DC(J563):DG(I226) DC(J564):DG(I225) DA(J565):DT(I224) DG(J566):DC(I223) DT(J567):DA(I222) DA(J568):DT(I221) DT(J569):DA(I220) DG(J570):DC(I219) DG(J571):DC(I218) DC(J572):DG(I217) DG(J573):DC(I216) DG(J574):DC(I215) DC(J575):DG(I214) DC(J576):DG(I213) DA(J577):DT(I212) DG(J578):DC(I211) DT(J579):DA(I210) DG(J580):DC(I209) DC(J581):DG(I208) chaind ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7pff_KLMNOPQR:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME 3 OF THE 4X197 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DT(J213):DA(I576) DA(J214):DT(I575) DC(J215):DG(I574) DT(J216):DA(I573) DT(J217):DA(I572) DA(J218):DT(I571) DC(J219):DG(I570) DA(J220):DT(I569) DT(J221):DA(I568) DG(J222):DC(I567) DA(J223):DT(I566) DC(J224):DG(I565) DA(J225):DT(I564) DG(J226):DC(I563) DG(J227):DC(I562) DA(J228):DT(I561) DT(J229):DA(I560) DG(J230):DC(I559) DT(J231):DA(I558) DA(J232):DT(I557) DT(J233):DA(I556) DA(J234):DT(I555) DT(J235):DA(I554) DA(J236):DT(I553) DT(J237):DA(I552) DC(J238):DG(I551) DT(J239):DA(I550) DG(J240):DC(I549) DA(J241):DT(I548) DC(J242):DG(I547) DA(J243):DT(I546) DC(J244):DG(I545) DG(J245):DC(I544) DT(J246):DA(I543) DG(J247):DC(I542) DC(J248):DG(I541) DC(J249):DG(I540) DT(J250):DA(I539) DG(J251):DC(I538) DG(J252):DC(I537) DA(J253):DT(I536) DG(J254):DC(I535) DA(J255):DT(I534) DC(J256):DG(I533) DT(J257):DA(I532) DA(J258):DT(I531) DG(J259):DC(I530) DG(J260):DC(I529) DG(J261):DC(I528) DA(J262):DT(I527) DG(J263):DC(I526) DT(J264):DA(I525) DA(J265):DT(I524) DA(J266):DT(I523) DT(J267):DA(I522) DC(J268):DG(I521) DC(J269):DG(I520) DC(J270):DG(I519) DC(J271):DG(I518) DT(J272):DA(I517) DT(J273):DA(I516) DG(J274):DC(I515) DG(J275):DC(I514) DC(J276):DG(I513) DG(J277):DC(I512) DG(J278):DC(I511) DT(J279):DA(I510) DT(J280):DA(I509) DA(J281):DT(I508) DA(J282):DT(I507) DA(J283):DT(I506) DA(J284):DT(I505) DC(J285):DG(I504) DG(J286):DC(I503) DC(J287):DG(I502) DG(J288):DC(I501) DG(J289):DC(I500) DG(J290):DC(I499) DG(J291):DC(I498) DG(J292):DC(I497) DA(J293):DT(I496) DC(J294):DG(I495) DA(J295):DT(I494) DG(J296):DC(I493) DC(J297):DG(I492) DG(J298):DC(I491) DC(J299):DG(I490) DG(J300):DC(I489) DT(J301):DA(I488) DA(J302):DT(I487) DC(J303):DG(I486) DG(J304):DC(I485) DT(J305):DA(I484) DG(J306):DC(I483) DC(J307):DG(I482) DG(J308):DC(I481) DT(J310):DA(I480) DT(J311):DA(I478) DA(J312):DT(I477) DA(J313):DT(I476) DG(J314):DC(I475) DC(J315):DG(I474) DG(J316):DC(I473) DG(J317):DC(I472) DT(J318):DA(I471) DG(J319):DC(I470) DC(J320):DG(I469) DT(J321):DA(I468) DA(J322):DT(I467) DG(J323):DC(I466) DA(J324):DT(I465) DG(J325):DC(I464) DC(J326):DG(I463) DT(J327):DA(I462) DG(J328):DC(I461) DT(J329):DA(I460) DC(J330):DG(I459) DT(J331):DA(I458) DA(J332):DT(I457) DC(J333):DG(I456) DG(J334):DC(I455) DA(J335):DT(I454) DC(J336):DG(I453) DC(J337):DG(I452) DA(J338):DT(I451) DA(J339):DT(I450) DT(J340):DA(I449) DT(J341):DA(I448) DG(J342):DC(I447) DA(J343):DT(I446) DG(J344):DC(I445) DC(J345):DG(I444) DG(J346):DC(I443) DG(J347):DC(I442) DC(J348):DG(I441) DC(J349):DG(I440) DT(J350):DA(I439) DC(J351):DG(I438) DG(J352):DC(I437) DG(J353):DC(I436) DC(J354):DG(I435) DA(J355):DT(I434) DC(J356):DG(I433) DC(J357):DG(I432) DG(J358):DC(I431) DG(J359):DC(I430) DG(J360):DC(I429) DA(J361):DT(I428) DT(J362):DA(I427) DT(J363):DA(I426) DC(J364):DG(I425) DT(J365):DA(I424) DC(J366):DG(I423) DC(J367):DG(I422) DA(J368):DT(I421) DG(J369):DC(I420) DT(J370):DA(I419) DA(J371):DT(I418) DT(J372):DA(I417) DG(J373):DC(I416) DG(J374):DC(I415) DC(J375):DG(I414) DG(J376):DC(I413) DG(J377):DC(I412) DC(J378):DG(I411) DC(J379):DG(I410) chainK ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 1) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 16) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/arakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/KrsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/kvlrdniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kRsrkesysvyvykvlkqvhpdtgisskamgiMnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7pff_P:Histone-fold; title=NUCLEOSOME 3 OF THE 4X197 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DG(I410):DC(J379) DG(I411):DC(J378) DC(I412):DG(J377) DC(I413):DG(J376) DG(I414):DC(J375) DC(I415):DG(J374) DC(I416):DG(J373) DA(I417):DT(J372) DT(I418):DA(J371) DA(I419):DT(J370) DC(I420):DG(J369) DT(I421):DA(J368) DG(I422):DC(J367) DG(I423):DC(J366) DA(I424):DT(J365) DG(I425):DC(J364) DA(I426):DT(J363) DA(I427):DT(J362) DT(I428):DA(J361) DC(I429):DG(J360) DC(I430):DG(J359) DC(I431):DG(J358) DG(I432):DC(J357) DG(I433):DC(J356) DT(I434):DA(J355) DG(I435):DC(J354) DC(I436):DG(J353) DC(I437):DG(J352) DG(I438):DC(J351) DA(I439):DT(J350) DG(I440):DC(J349) DG(I441):DC(J348) DC(I442):DG(J347) DC(I443):DG(J346) DG(I444):DC(J345) DC(I445):DG(J344) DT(I446):DA(J343) DC(I447):DG(J342) DA(I448):DT(J341) DA(I449):DT(J340) DT(I450):DA(J339) DT(I451):DA(J338) DG(I452):DC(J337) DG(I453):DC(J336) DT(I454):DA(J335) DC(I455):DG(J334) DG(I456):DC(J333) DT(I457):DA(J332) DA(I458):DT(J331) DG(I459):DC(J330) DA(I460):DT(J329) DC(I461):DG(J328) DA(I462):DT(J327) DG(I463):DC(J326) DC(I464):DG(J325) DT(I465):DA(J324) DC(I466):DG(J323) DT(I467):DA(J322) DA(I468):DT(J321) DG(I469):DC(J320) DC(I470):DG(J319) DA(I471):DT(J318) DC(I472):DG(J317) DC(I473):DG(J316) DG(I474):DC(J315) DC(I475):DG(J314) DT(I476):DA(J313) DT(I477):DA(J312) DA(I478):DT(J311) DA(I480):DT(J310) DC(I481):DG(J308) DG(I482):DC(J307) DC(I483):DG(J306) DA(I484):DT(J305) DC(I485):DG(J304) DG(I486):DC(J303) DT(I487):DA(J302) DA(I488):DT(J301) DC(I489):DG(J300) DG(I490):DC(J299) DC(I491):DG(J298) DG(I492):DC(J297) DC(I493):DG(J296) DT(I494):DA(J295) DG(I495):DC(J294) DT(I496):DA(J293) DC(I497):DG(J292) DC(I498):DG(J291) DC(I499):DG(J290) DC(I500):DG(J289) DC(I501):DG(J288) DG(I502):DC(J287) DC(I503):DG(J286) DG(I504):DC(J285) DT(I505):DA(J284) DT(I506):DA(J283) DT(I507):DA(J282) DT(I508):DA(J281) DA(I509):DT(J280) DA(I510):DT(J279) DC(I511):DG(J278) DC(I512):DG(J277) DG(I513):DC(J276) DC(I514):DG(J275) DC(I515):DG(J274) DA(I516):DT(J273) DA(I517):DT(J272) DG(I518):DC(J271) DG(I519):DC(J270) DG(I520):DC(J269) DG(I521):DC(J268) DA(I522):DT(J267) DT(I523):DA(J266) DT(I524):DA(J265) DA(I525):DT(J264) DC(I526):DG(J263) DT(I527):DA(J262) DC(I528):DG(J261) DC(I529):DG(J260) DC(I530):DG(J259) DT(I531):DA(J258) DA(I532):DT(J257) DG(I533):DC(J256) DT(I534):DA(J255) DC(I535):DG(J254) DT(I536):DA(J253) DC(I537):DG(J252) DC(I538):DG(J251) DA(I539):DT(J250) DG(I540):DC(J249) DG(I541):DC(J248) DC(I542):DG(J247) DA(I543):DT(J246) DC(I544):DG(J245) DG(I545):DC(J244) DT(I546):DA(J243) DG(I547):DC(J242) DT(I548):DA(J241) DC(I549):DG(J240) DA(I550):DT(J239) DG(I551):DC(J238) DA(I552):DT(J237) DT(I553):DA(J236) DA(I554):DT(J235) DT(I555):DA(J234) DA(I556):DT(J233) DT(I557):DA(J232) DA(I558):DT(J231) DC(I559):DG(J230) DA(I560):DT(J229) DT(I561):DA(J228) DC(I562):DG(J227) DC(I563):DG(J226) DT(I564):DA(J225) DG(I565):DC(J224) DT(I566):DA(J223) DC(I567):DG(J222) DA(I568):DT(J221) DT(I569):DA(J220) DG(I570):DC(J219) DT(I571):DA(J218) DA(I572):DT(J217) DA(I573):DT(J216) DG(I574):DC(J215) DT(I575):DA(J214) DA(I576):DT(J213) chainP ( 16) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvlrdniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >7pfo_25: title=CORE HUMAN REPLISOME organism=? DNA sequence DT(M26) DT(M27) DA(M28) DG(M29) DA(M30) DG(M31) DA(M32) DA(M33) DT(M34) DT(M35) DG(M36) DG(M37) DA(M38) DG(M39) DA(M40) DG(M41) DT(M42) DG(M43) DT(M44) DG(M45) DT(M46) DT(M51) DT(M52) DT(M53) DT(M54) DT(M55) DT(M56) DT(M57) DT(M58) DT(M59) DT(M60) DT(M61) chain2 (394) ARG562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (401) TRP569 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 chain5 (180) LEU209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) ARG420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 (380) PHE427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (404) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence esienledlkghsvrewvsmagprleihhrfknflrthvdshghnvfkerisdmckenreslvvnyedlaarehvlayflpeapaellqifdeaalevvlamypkydritnhihvrishlplveelrslrqlhlnqlirtsgvvtsctgvlpqlsmvkyncnkcnfvlgpfcqsqnqevkpgscpecqsagpfevnmeetiyqnyqririqespgkvaagrlprskdailladlvdsckpgdeieltgiyhnnydgslntangfpvfatvilanhvakkdnkvavgeltdedvkmitslskdqqigekifasiapsiyghedikrglalalfggepknpggkhkvrgdinvllcgdpgtaksqflkyiekvssraifttgqgasavgltayvqRhpvsreWtleagalvladrgvclidefdkmndqdrtsiheameqqsisiskagivtslqarctviaaanpiggrydpsltfsenvdltepiisrfdilcvvrdtvdpvqdemlarfvvgshvrhhpstygveplpqevlkkyiiyakervhpklnqmdqdkvakmysdlrkesmatgsipitvrhiesmirmaeaharihlrdyvieddvnmairvmlesfidtqkfsvmrsmrktfarylsfrrdnnelllfilkqlvaeqvtyqrnvpekdlvdkarqinihnlsafydselfrmnkfshdlkrkmi/adegqarksqlqrrfkeflrqyrvgtdrtgftfkyrdelkrhynlgeywievemedlasfdedladylykqpaehlqlleeaakevadevtrprpsgeevlqdiqvmlksdaspssirslksdmmshlvkipgiiiaasavrakatrisiqcrscrntltniamrpglegyalprkccpLdpyfimpdkckcvdfqtlklqelpdavphgemprhmqlycdrylcdkvvpgnrvtimgiysikkfvgvgirssyirvlgiqvdtgavspqeeeefrrlaalpnvyevisksiapsifggtdmkkaiacllfggsrkrlpdgltrrgdinllmlgdpgtaksqllkfvekcspigvytsgkgssaagltasvmRdpssrnFimeggamvladggvvcidefdkmReddrvaiheameqqtisiakagitttlnsrcsvlaaansvfgrwdetkgednidfmptilsrfdmifivkdehneerdvmlakhvitlhvsaltqtqavegeidlaklkkfiaycrvkcgprlsaeaaeklknryiimrsgarqherdsdrrssipitvrqleaivriaealskmklqpfateadveealrlfqvstldaa >7pfo_3467KL: title=CORE HUMAN REPLISOME organism=? DNA sequence DC(N15):DT(M51) DA(N16):DT(M46) DC(N17):DG(M45) DA(N18):DT(M44) DC(N19):DG(M43) DA(N20):DT(M42) DC(N21):DG(M41) DT(N22):DA(M40) DC(N23):DG(M39) DT(N24):DA(M38) DC(N25):DG(M37) DC(N26):DG(M36) DA(N27):DT(M35) DA(N28):DT(M34) DT(N29):DA(M33) DT(N30):DA(M32) DC(N31):DG(M31) DT(N32):DA(M30) DC(N33):DG(M29) DT(N34):DA(M28) DA(N35):DT(M27) DA(N36):DT(M26) chain4 (248) ARG404 0 2 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain6 chain7 (262) PHE285 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) VAL288 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) ARG420 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain3 chainK (312) ARG321 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 chainL ( 2) ARG62 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence velreaqrdyldflddeedqgiyqskvrelisdnqyrlivnvndlrrknekranrllnnafeelvafqralkdfvasidatyakqyeefyvglegsfgskhvsprtltscflscvvcvegivtkcslvrpkvvrsvhycpatkktierrysdlttlvafpsssvyptkdeennpleteyglsvykdhqtitiqempekapagqlprsvdvildddlvdkakpgdrvqvvgtyrclpgkkggytsgtfrtvliacnvkqmskdiakikkfsktrskdifdqlakslapsihghdyvkkailclllggverdlengshirgdinilligdpsvaksqllryvlctapraipttgrgssgvgltaavttdqetgerrleagamvladrgvvcidefdkmsdmdrtaihevmeqgrvtiakagiharlnarcsvlaaanpvygrydqyktpmeniglqdsllsrfdllfimldqmdpeqdreisdhvlrmhryrapgeqdgdamplgsavdilatddpnlhgtkkkkekmvsaafmkkyihvakiikpvltqesatyiaeeysrlrsqdsmssdtartspvtartletlirlatahakarmsktvdlqdaeeavelvqyayfkk/lgqklviwgtdvnvaackenfqrflqrfidplteplymqrlgeinvigepflnvncehiksfdknlyrqlisypqeviptfdmavneiffdrypdsilehqiqvrpfnalktknmrnlnpedidqlitisgmvirtsqlipemqeaffqcqvcahttrvemdrgriaepsvcgrchtthsmalihnrslfsdkqmiklqespedmpagqtphtvilfahndlvdkvqpgdrvnvtgiyravpirvnpRvsnvksvykthidvihyrktdaksekrvellkelsrkpdiyerlasalapsiyehedikkgillqlfggtrkkfraeinillcgdpgtsksqllqyvynlvprgqytsgkgssavgltayvmkdpetrqlvlqtgalvlsdngiccidefdkmnestrsvlhevmeqqtlsiakagiicqlnartsvlaaanpiesqwnpkkttieniqlphtllsrfdlifllldpqdeaydrrlahhlvalyyqseeqaeeelldmavlkdyiayahstimprlseeasqalieayvdmrkigssrgmvsayprqleslirlaeahakvrlsnkveaidveeakrlhrealkqsatdprtgivdisilttgmsatsrkr/laaaaepgagsqhlevrdevaekcqklfldfleefqssdgeikylqlaeelirperntlvvsfvdleqfnqqlsttiqeefyrvypylcralktfvkdrkeiplakdfyvafqdlptrhkireltssriglltrisgqvvrthpvhpelvsgtflcldcqtvirdveqqfkytqpnicrnpvcanrrrflldtnksrfvdfqkvriqetqaelprgsiprslevilraeavesaqagdkcdftgtliVvpdvsklstpgaraetetegirglralgvrdlsyrlvflaccvaptnptaesiknqmtvkewekvfemsqdknlyhnlctslfptihgndevkrgvllmlfggvpkttgegtslrgdinvcivgdpstaksqflkhveefspravytsgkassaagltaavvrdeeshefvieagalmladngvccidefdkmdvrdqvaiheameqqtisitkagvkatlnartsilaaanpisghydrskslkqninlsapimsrfdlffilvdecnevtdyaiarrivdlhsrievyslddirryllfarqfkpkiskesedfiveqykhlrqrdgsgvtksswritvrqlesmirlseamarmhccdevqpkhvkeafrllnksiirvet/lkdyalekekvkkflqefyqddelgkkqfkygnqlvrlahreqvalyvdlddvaeddpelvdsicenarryaklfadavqellpqykedvyiehrlmmeqrsrpaelmrrfelyfqgpssnkprvirevradsvgklvtvrgivtrvsevkpkmvvatytcdqcgaetyqpiqsptfmplimcpsqecqtnrsggrlylqtrgsrfikfqemkmqehsdqvpvgniprsitvlvegentriaqpgdhvsvtgiflpilrtgFrqVvqgllsetyleahrivkmdfyeklaasiapeiyghedvkkalllllvggvdqsprgmkirgniniclmgdpgvaksqllsyidrlaprsqyttgrgssgvgltaavlRdsvsgeltleggalvladqgvccidefdkmaeadrtaihevmeqqtisiakagilttlnarcsilaaanpaygrynprrsleqniqlpaallsrfdllwliqdrpdrdndlrlaqhityvhqhsrqppsqfepldmklmrryiamcrekqpmvpesladyitaayvemrreawastytsartllailrlstalarlrmvdvvekedvneairlmemskdsll/ncellatcsalgylegdtyhkepdclesvkdlirylrhedetrdvrqqlgaaqilqsdllpiltqhhqdkplfdavirlmvnltqpallcfgnlpkepsfrhhflqvltylqaykeafasekafgvlsetlyellqlgrqeednllierilllvrnilhvpadldqekkidddasahdqllwaihlsglddlllflasssaeeqwslhvleivslmfrdqnpeqlagvgqgrlaqersadfaelevlrqremaekktralqrgnrhsrfggsyivqglksigerdlifhkglhnlrnyssdlgkqpkkvpkRrqaarelsiqrrsalnvrlflrdfcseflencynrlmgsvkdhllrekaqqhdetyymwalaffmafnraasfrpglvsetlsvrtfhfieqnltnyyemmltdrkeaaswarrmhlalkayqellatvnemdispdeavressriiknnifyvmeyrelflalfrkfdercqprsflrdlvetthlflkmlerfcrsrgnlvvqsekefnfldylkrfacstvvrayvlllrsyqqnsahtnhcivkmlhrlahdlkmeallfqlsvfclfnrllsdpaagaykelvtfakyilgkffalaavnqkafvellfwkntavvrem/kRnipkldaqrliserglpalrhvfdkakfkgkgheaedlkmlirhmehwahrlfpklqfedfidrveylgskkevqtclkrirldl >7pfo_5:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CORE HUMAN REPLISOME organism=? DNA sequence DT(M26) DT(M27) DA(M28) DG(M29) DA(M30) DG(M31) DA(M32) DA(M33) DT(M34) DT(M35) DG(M36) DG(M37) DA(M38) DG(M39) DA(M40) DG(M41) DT(M42) DG(M43) DT(M44) DG(M45) DT(M46) DT(M51) DT(M52) DT(M53) DT(M54) DT(M55) DT(M56) DT(M57) DT(M58) DT(M59) DT(M60) DT(M61) chain5 (180) LEU209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) ARG420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 (380) PHE427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (404) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence adegqarksqlqrrfkeflrqyrvgtdrtgftfkyrdelkrhynlgeywievemedlasfdedladylykqpaehlqlleeaakevadevtrprpsgeevlqdiqvmlksdaspssirslksdmmshlvkipgiiiaasavrakatrisiqcrscrntltniamrpglegyalprkccpLdpyfimpdkckcvdfqtlklqelpdavphgemprhmqlycdrylcdkvvpgnrvtimgiysikkfvgvgirssyirvlgiqvdtgavspqeeeefrrlaalpnvyevisksiapsifggtdmkkaiacllfggsrkrlpdgltrrgdinllmlgdpgtaksqllkfvekcspigvytsgkgssaagltasvmRdpssrnFimeggamvladggvvcidefdkmReddrvaiheameqqtisiakagitttlnsrcsvlaaansvfgrwdetkgednidfmptilsrfdmifivkdehneerdvmlakhvitlhvsaltqtqavegeidlaklkkfiaycrvkcgprlsaeaaeklknryiimrsgarqherdsdrrssipitvrqleaivriaealskmklqpfateadveealrlfqvstldaa >7pft_P:Histone-fold; title=TRINUCLEOSOME OF THE 4X207 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DG(I16):DC(J813) DG(I17):DC(J812) DC(I18):DG(J811) DC(I19):DG(J810) DG(I20):DC(J809) DC(I21):DG(J808) DC(I22):DG(J807) DA(I23):DT(J806) DC(I24):DG(J805) DT(I25):DA(J804) DG(I26):DC(J803) DG(I27):DC(J802) DC(I28):DG(J801) DC(I29):DG(J800) DA(I30):DT(J799) DC(I31):DG(J798) DT(I32):DA(J797) DG(I33):DC(J796) DG(I34):DC(J795) DA(I35):DT(J794) DG(I36):DC(J793) DA(I37):DT(J792) DA(I38):DT(J791) DT(I39):DA(J790) DC(I40):DG(J789) DC(I41):DG(J788) DC(I42):DG(J787) DG(I43):DC(J786) DG(I44):DC(J785) DT(I45):DA(J784) DG(I46):DC(J783) DC(I47):DG(J782) DC(I48):DG(J781) DG(I49):DC(J780) DA(I50):DT(J779) DG(I51):DC(J778) DG(I52):DC(J777) DC(I53):DG(J776) DC(I54):DG(J775) DG(I55):DC(J774) DC(I56):DG(J773) DT(I57):DA(J772) DC(I58):DG(J771) DA(I59):DT(J770) DA(I60):DT(J769) DT(I61):DA(J768) DT(I62):DA(J767) DG(I63):DC(J766) DG(I64):DC(J765) DT(I65):DA(J764) DC(I66):DG(J763) DG(I67):DC(J762) DT(I68):DA(J761) DA(I69):DT(J760) DG(I70):DC(J759) DA(I71):DT(J758) DC(I72):DG(J757) DA(I73):DT(J756) DG(I74):DC(J755) DC(I75):DG(J754) DT(I76):DA(J753) DC(I77):DG(J752) DT(I78):DA(J751) DA(I79):DT(J750) DG(I80):DC(J749) DC(I81):DG(J748) DA(I82):DT(J747) DC(I83):DG(J746) DC(I84):DG(J745) DG(I85):DC(J744) DC(I86):DG(J743) DT(I87):DA(J742) DT(I88):DA(J741) DA(I89):DT(J740) DA(I90):DT(J739) DA(I91):DT(J738) DC(I92):DG(J737) DG(I93):DC(J736) DC(I94):DG(J735) DA(I95):DT(J734) DC(I96):DG(J733) DG(I97):DC(J732) DT(I98):DA(J731) DA(I99):DT(J730) DC(I100):DG(J729) DG(I101):DC(J728) DC(I102):DG(J727) DG(I103):DC(J726) DC(I104):DG(J725) DT(I105):DA(J724) DG(I106):DC(J723) DT(I107):DA(J722) DC(I108):DG(J721) DC(I109):DG(J720) DC(I110):DG(J719) DC(I111):DG(J718) DC(I112):DG(J717) DG(I113):DC(J716) DC(I114):DG(J715) DG(I115):DC(J714) DT(I116):DA(J713) DT(I117):DA(J712) DT(I118):DA(J711) DT(I119):DA(J710) DA(I120):DT(J709) DA(I121):DT(J708) DC(I122):DG(J707) DC(I123):DG(J706) DG(I124):DC(J705) DC(I125):DG(J704) DC(I126):DG(J703) DA(I127):DT(J702) DA(I128):DT(J701) DG(I129):DC(J700) DG(I130):DC(J699) DG(I131):DC(J698) DG(I132):DC(J697) DA(I133):DT(J696) DT(I134):DA(J695) DT(I135):DA(J694) DA(I136):DT(J693) DC(I137):DG(J692) DT(I138):DA(J691) DC(I139):DG(J690) DC(I140):DG(J689) DC(I141):DG(J688) DT(I142):DA(J687) DA(I143):DT(J686) DG(I144):DC(J685) DT(I145):DA(J684) DC(I146):DG(J683) DT(I147):DA(J682) DC(I148):DG(J681) DC(I149):DG(J680) DA(I150):DT(J679) DG(I151):DC(J678) DG(I152):DC(J677) DC(I153):DG(J676) DA(I154):DT(J675) DC(I155):DG(J674) DG(I156):DC(J673) DT(I157):DA(J672) DG(I158):DC(J671) DT(I159):DA(J670) DC(I160):DG(J669) DA(I161):DT(J668) DC(I162):DG(J667) DA(I163):DT(J666) DT(I164):DA(J665) DA(I165):DT(J664) DT(I166):DA(J663) DA(I167):DT(J662) DT(I168):DA(J661) DA(I169):DT(J660) DC(I170):DG(J659) DA(I171):DT(J658) DT(I172):DA(J657) DC(I173):DG(J656) DC(I174):DG(J655) DT(I175):DA(J654) DG(I176):DC(J653) DT(I177):DA(J652) DG(I178):DC(J651) DC(I179):DG(J650) DA(I180):DT(J649) DT(I181):DA(J648) DG(I182):DC(J647) DT(I183):DA(J646) DA(I184):DT(J645) DA(I185):DT(J644) DG(I186):DC(J643) DT(I187):DA(J642) DG(I188):DC(J641) DC(I189):DG(J640) DA(I190):DT(J639) DT(I191):DA(J638) DG(I192):DC(J637) DT(I193):DA(J636) DA(I194):DT(J635) DA(I195):DT(J634) DG(I196):DC(J633) DT(I197):DA(J632) DG(I198):DC(J631) DC(I199):DG(J630) DA(I200):DT(J629) DT(I201):DA(J628) DG(I202):DC(J627) DT(I203):DA(J626) DA(I204):DT(J625) DA(I205):DT(J624) DG(I206):DC(J623) DT(I207):DA(J622) DA(I208):DT(J621) DC(I209):DG(J620) DT(I210):DA(J619) DC(I211):DG(J618) DT(I212):DA(J617) DG(I213):DC(J616) DG(I214):DC(J615) DC(I215):DG(J614) DC(I216):DG(J613) DG(I217):DC(J612) DC(I218):DG(J611) DC(I219):DG(J610) DA(I220):DT(J609) DC(I221):DG(J608) DT(I222):DA(J607) DG(I223):DC(J606) DG(I224):DC(J605) DC(I225):DG(J604) DC(I226):DG(J603) DG(I227):DC(J602) DC(I228):DG(J601) DC(I229):DG(J600) DA(I230):DT(J599) DC(I231):DG(J598) DT(I232):DA(J597) DG(I233):DC(J596) DG(I234):DC(J595) DC(I235):DG(J594) DC(I236):DG(J593) DA(I237):DT(J592) DC(I238):DG(J591) DT(I239):DA(J590) DG(I240):DC(J589) DG(I241):DC(J588) DA(I242):DT(J587) DG(I243):DC(J586) DA(I244):DT(J585) DA(I245):DT(J584) DT(I246):DA(J583) DC(I247):DG(J582) DC(I248):DG(J581) DC(I249):DG(J580) DG(I250):DC(J579) DG(I251):DC(J578) DT(I252):DA(J577) DG(I253):DC(J576) DC(I254):DG(J575) DC(I255):DG(J574) DG(I256):DC(J573) DA(I257):DT(J572) DG(I258):DC(J571) DG(I259):DC(J570) DC(I260):DG(J569) DC(I261):DG(J568) DG(I262):DC(J567) DC(I263):DG(J566) DT(I264):DA(J565) DC(I265):DG(J564) DA(I266):DT(J563) DA(I267):DT(J562) DT(I268):DA(J561) DT(I269):DA(J560) DG(I270):DC(J559) DG(I271):DC(J558) DT(I272):DA(J557) DC(I273):DG(J556) DG(I274):DC(J555) DT(I275):DA(J554) DA(I276):DT(J553) DG(I277):DC(J552) DA(I278):DT(J551) DC(I279):DG(J550) DA(I280):DT(J549) DG(I281):DC(J548) DC(I282):DG(J547) DT(I283):DA(J546) DC(I284):DG(J545) DT(I285):DA(J544) DA(I286):DT(J543) DG(I287):DC(J542) DC(I288):DG(J541) DA(I289):DT(J540) DC(I290):DG(J539) DC(I291):DG(J538) DG(I292):DC(J537) DC(I293):DG(J536) DT(I294):DA(J535) DT(I295):DA(J534) DA(I296):DT(J533) DA(I297):DT(J532) DA(I298):DT(J531) DC(I299):DG(J530) DG(I300):DC(J529) DC(I301):DG(J528) DA(I302):DT(J527) DC(I303):DG(J526) DG(I304):DC(J525) DT(I305):DA(J524) DA(I306):DT(J523) DC(I307):DG(J522) DG(I308):DC(J521) DC(I309):DG(J520) DG(I310):DC(J519) DC(I311):DG(J518) DT(I312):DA(J517) DG(I313):DC(J516) DT(I314):DA(J515) DC(I315):DG(J514) DC(I316):DG(J513) DC(I317):DG(J512) DC(I318):DG(J511) DC(I319):DG(J510) DG(I320):DC(J509) DC(I321):DG(J508) DG(I322):DC(J507) DT(I323):DA(J506) DT(I324):DA(J505) DT(I325):DA(J504) DT(I326):DA(J503) DA(I327):DT(J502) DA(I328):DT(J501) DC(I329):DG(J500) DC(I330):DG(J499) DG(I331):DC(J498) DC(I332):DG(J497) DC(I333):DG(J496) DA(I334):DT(J495) DA(I335):DT(J494) DG(I336):DC(J493) DG(I337):DC(J492) DG(I338):DC(J491) DG(I339):DC(J490) DA(I340):DT(J489) DT(I341):DA(J488) DT(I342):DA(J487) DA(I343):DT(J486) DC(I344):DG(J485) DT(I345):DA(J484) DC(I346):DG(J483) DC(I347):DG(J482) DC(I348):DG(J481) DT(I349):DA(J480) DA(I350):DT(J479) DG(I351):DC(J478) DT(I352):DA(J477) DC(I353):DG(J476) DT(I354):DA(J475) DC(I355):DG(J474) DC(I356):DG(J473) DA(I357):DT(J472) DG(I358):DC(J471) DG(I359):DC(J470) DC(I360):DG(J469) DA(I361):DT(J468) DC(I362):DG(J467) DG(I363):DC(J466) DT(I364):DA(J465) DG(I365):DC(J464) DT(I366):DA(J463) DC(I367):DG(J462) DA(I368):DT(J461) DC(I369):DG(J460) DA(I370):DT(J459) DT(I371):DA(J458) DA(I372):DT(J457) DT(I373):DA(J456) DA(I374):DT(J455) DT(I375):DA(J454) DA(I376):DT(J453) DC(I377):DG(J452) DA(I378):DT(J451) DT(I379):DA(J450) DC(I380):DG(J449) DC(I381):DG(J448) DT(I382):DA(J447) DG(I383):DC(J446) DT(I384):DA(J445) DG(I385):DC(J444) DC(I386):DG(J443) DA(I387):DT(J442) DT(I388):DA(J441) DG(I389):DC(J440) DT(I390):DA(J439) DA(I391):DT(J438) DA(I392):DT(J437) DG(I393):DC(J436) DT(I394):DA(J435) DG(I395):DC(J434) DC(I396):DG(J433) DA(I397):DT(J432) DT(I398):DA(J431) DG(I399):DC(J430) DT(I400):DA(J429) DA(I401):DT(J428) DA(I402):DT(J427) DG(I403):DC(J426) DT(I404):DA(J425) DG(I405):DC(J424) DC(I406):DG(J423) DA(I407):DT(J422) DT(I408):DA(J421) DG(I409):DC(J420) DT(I410):DA(J419) DA(I411):DT(J418) DA(I412):DT(J417) DG(I413):DC(J416) DT(I414):DA(J415) DA(I415):DT(J414) DC(I416):DG(J413) DT(I417):DA(J412) DC(I418):DG(J411) DT(I419):DA(J410) DG(I420):DC(J409) DG(I421):DC(J408) DC(I422):DG(J407) DC(I423):DG(J406) DG(I424):DC(J405) DC(I425):DG(J404) DC(I426):DG(J403) DA(I427):DT(J402) DC(I428):DG(J401) DT(I429):DA(J400) DG(I430):DC(J399) DG(I431):DC(J398) DC(I432):DG(J397) DC(I433):DG(J396) DG(I434):DC(J395) DC(I435):DG(J394) DC(I436):DG(J393) DA(I437):DT(J392) DC(I438):DG(J391) DT(I439):DA(J390) DG(I440):DC(J389) DG(I441):DC(J388) DC(I442):DG(J387) DC(I443):DG(J386) DA(I444):DT(J385) DC(I445):DG(J384) DT(I446):DA(J383) DG(I447):DC(J382) DG(I448):DC(J381) DA(I449):DT(J380) DG(I450):DC(J379) DA(I451):DT(J378) DA(I452):DT(J377) DT(I453):DA(J376) DC(I454):DG(J375) DC(I455):DG(J374) DC(I456):DG(J373) DG(I457):DC(J372) DG(I458):DC(J371) DT(I459):DA(J370) DG(I460):DC(J369) DC(I461):DG(J368) DC(I462):DG(J367) DG(I463):DC(J366) DA(I464):DT(J365) DG(I465):DC(J364) DG(I466):DC(J363) DC(I467):DG(J362) DC(I468):DG(J361) DG(I469):DC(J360) DC(I470):DG(J359) DT(I471):DA(J358) DC(I472):DG(J357) DA(I473):DT(J356) DA(I474):DT(J355) DT(I475):DA(J354) DT(I476):DA(J353) DG(I477):DC(J352) DG(I478):DC(J351) DT(I479):DA(J350) DC(I480):DG(J349) DG(I481):DC(J348) DT(I482):DA(J347) DA(I483):DT(J346) DG(I484):DC(J345) DA(I485):DT(J344) DC(I486):DG(J343) DA(I487):DT(J342) DG(I488):DC(J341) DC(I489):DG(J340) DT(I490):DA(J339) DC(I491):DG(J338) DT(I492):DA(J337) DA(I493):DT(J336) DG(I494):DC(J335) DC(I495):DG(J334) DA(I496):DT(J333) DC(I497):DG(J332) DC(I498):DG(J331) DG(I499):DC(J330) DC(I500):DG(J329) DT(I501):DA(J328) DT(I502):DA(J327) DA(I503):DT(J326) DA(I504):DT(J325) DA(I505):DT(J324) DC(I506):DG(J323) DG(I507):DC(J322) DC(I508):DG(J321) DA(I509):DT(J320) DC(I510):DG(J319) DG(I511):DC(J318) DT(I512):DA(J317) DA(I513):DT(J316) DC(I514):DG(J315) DG(I515):DC(J314) DC(I516):DG(J313) DG(I517):DC(J312) DC(I518):DG(J311) DT(I519):DA(J310) DG(I520):DC(J309) DT(I521):DA(J308) DC(I522):DG(J307) DC(I523):DG(J306) DC(I524):DG(J305) DC(I525):DG(J304) DC(I526):DG(J303) DG(I527):DC(J302) DC(I528):DG(J301) DG(I529):DC(J300) DT(I530):DA(J299) DT(I531):DA(J298) DT(I532):DA(J297) DT(I533):DA(J296) DA(I534):DT(J295) DA(I535):DT(J294) DC(I536):DG(J293) DC(I537):DG(J292) DG(I538):DC(J291) DC(I539):DG(J290) DC(I540):DG(J289) DA(I541):DT(J288) DA(I542):DT(J287) DG(I543):DC(J286) DG(I544):DC(J285) DG(I545):DC(J284) DG(I546):DC(J283) DA(I547):DT(J282) DT(I548):DA(J281) DT(I549):DA(J280) DA(I550):DT(J279) DC(I551):DG(J278) DT(I552):DA(J277) DC(I553):DG(J276) DC(I554):DG(J275) DC(I555):DG(J274) DT(I556):DA(J273) DA(I557):DT(J272) DG(I558):DC(J271) DT(I559):DA(J270) DC(I560):DG(J269) DT(I561):DA(J268) DC(I562):DG(J267) DC(I563):DG(J266) DA(I564):DT(J265) DG(I565):DC(J264) DG(I566):DC(J263) DC(I567):DG(J262) DA(I568):DT(J261) DC(I569):DG(J260) DG(I570):DC(J259) DT(I571):DA(J258) DG(I572):DC(J257) DT(I573):DA(J256) DC(I574):DG(J255) DA(I575):DT(J254) DC(I576):DG(J253) DA(I577):DT(J252) DT(I578):DA(J251) DA(I579):DT(J250) DT(I580):DA(J249) DA(I581):DT(J248) DT(I582):DA(J247) DA(I583):DT(J246) DC(I584):DG(J245) DA(I585):DT(J244) DT(I586):DA(J243) DC(I587):DG(J242) DC(I588):DG(J241) DT(I589):DA(J240) DG(I590):DC(J239) DT(I591):DA(J238) DG(I592):DC(J237) DC(I593):DG(J236) DA(I594):DT(J235) DT(I595):DA(J234) DG(I596):DC(J233) DT(I597):DA(J232) DA(I598):DT(J231) DA(I599):DT(J230) DG(I600):DC(J229) DT(I601):DA(J228) DG(I602):DC(J227) DC(I603):DG(J226) DA(I604):DT(J225) DT(I605):DA(J224) DG(I606):DC(J223) chainP ( 16) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvlrdniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >7pfv_C:Histone-fold; title=NUCLEOSOME 1 OF THE 4X207 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DG(I16):DC(J813) DG(I17):DC(J812) DC(I18):DG(J811) DC(I19):DG(J810) DG(I20):DC(J809) DC(I21):DG(J808) DC(I22):DG(J807) DA(I23):DT(J806) DC(I24):DG(J805) DT(I25):DA(J804) DG(I26):DC(J803) DG(I27):DC(J802) DC(I28):DG(J801) DC(I29):DG(J800) DA(I30):DT(J799) DC(I31):DG(J798) DT(I32):DA(J797) DG(I33):DC(J796) DG(I34):DC(J795) DA(I35):DT(J794) DG(I36):DC(J793) DA(I37):DT(J792) DA(I38):DT(J791) DT(I39):DA(J790) DC(I40):DG(J789) DC(I41):DG(J788) DC(I42):DG(J787) DG(I43):DC(J786) DG(I44):DC(J785) DT(I45):DA(J784) DG(I46):DC(J783) DC(I47):DG(J782) DC(I48):DG(J781) DG(I49):DC(J780) DA(I50):DT(J779) DG(I51):DC(J778) DG(I52):DC(J777) DC(I53):DG(J776) DC(I54):DG(J775) DG(I55):DC(J774) DC(I56):DG(J773) DT(I57):DA(J772) DC(I58):DG(J771) DA(I59):DT(J770) DA(I60):DT(J769) DT(I61):DA(J768) DT(I62):DA(J767) DG(I63):DC(J766) DG(I64):DC(J765) DT(I65):DA(J764) DC(I66):DG(J763) DG(I67):DC(J762) DT(I68):DA(J761) DA(I69):DT(J760) DG(I70):DC(J759) DA(I71):DT(J758) DC(I72):DG(J757) DA(I73):DT(J756) DG(I74):DC(J755) DC(I75):DG(J754) DT(I76):DA(J753) DC(I77):DG(J752) DT(I78):DA(J751) DA(I79):DT(J750) DG(I80):DC(J749) DC(I81):DG(J748) DA(I82):DT(J747) DC(I83):DG(J746) DC(I84):DG(J745) DG(I85):DC(J744) DC(I86):DG(J743) DT(I87):DA(J742) DT(I88):DA(J741) DA(I89):DT(J740) DA(I90):DT(J739) DA(I91):DT(J738) DC(I92):DG(J737) DG(I93):DC(J736) DC(I94):DG(J735) DA(I95):DT(J734) DC(I96):DG(J733) DG(I97):DC(J732) DT(I98):DA(J731) DA(I99):DT(J730) DC(I100):DG(J729) DG(I101):DC(J728) DC(I102):DG(J727) DG(I103):DC(J726) DC(I104):DG(J725) DT(I105):DA(J724) DG(I106):DC(J723) DT(I107):DA(J722) DC(I108):DG(J721) DC(I109):DG(J720) DC(I110):DG(J719) DC(I111):DG(J718) DC(I112):DG(J717) DG(I113):DC(J716) DC(I114):DG(J715) DG(I115):DC(J714) DT(I116):DA(J713) DT(I117):DA(J712) DT(I118):DA(J711) DT(I119):DA(J710) DA(I121):DT(J709) DC(I122):DG(J707) DC(I123):DG(J706) DG(I124):DC(J705) DC(I125):DG(J704) DC(I126):DG(J703) DA(I127):DT(J702) DA(I128):DT(J701) DG(I129):DC(J700) DG(I130):DC(J699) DG(I131):DC(J698) DG(I132):DC(J697) DA(I133):DT(J696) DT(I134):DA(J695) DT(I135):DA(J694) DA(I136):DT(J693) DC(I137):DG(J692) DT(I138):DA(J691) DC(I139):DG(J690) DC(I140):DG(J689) DC(I141):DG(J688) DT(I142):DA(J687) DA(I143):DT(J686) DG(I144):DC(J685) DT(I145):DA(J684) DC(I146):DG(J683) DT(I147):DA(J682) DC(I148):DG(J681) DC(I149):DG(J680) DA(I150):DT(J679) DG(I151):DC(J678) DG(I152):DC(J677) DC(I153):DG(J676) DA(I154):DT(J675) DC(I155):DG(J674) DG(I156):DC(J673) DT(I157):DA(J672) DG(I158):DC(J671) DT(I159):DA(J670) DC(I160):DG(J669) DA(I161):DT(J668) DC(I162):DG(J667) DA(I163):DT(J666) DT(I164):DA(J665) DA(I165):DT(J664) DT(I166):DA(J663) DA(I167):DT(J662) DT(I168):DA(J661) DA(I169):DT(J660) DC(I170):DG(J659) DA(I171):DT(J658) DT(I172):DA(J657) DC(I173):DG(J656) DC(I174):DG(J655) DT(I175):DA(J654) DG(I176):DC(J653) DT(I177):DA(J652) DG(I178):DC(J651) DC(I179):DG(J650) DA(I180):DT(J649) DT(I181):DA(J648) DG(I182):DC(J647) DT(I183):DA(J646) DA(I184):DT(J645) DA(I185):DT(J644) DG(I186):DC(J643) DT(I187):DA(J642) DG(I188):DC(J641) DC(I189):DG(J640) DA(I190):DT(J639) DT(I191):DA(J638) DG(I192):DC(J637) chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >7pfw_g:Histone-fold; title=NUCLEOSOME 2 OF THE 4X207 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DA(J435):DT(I394) DC(J436):DG(I393) DT(J437):DA(I392) DT(J438):DA(I391) DA(J439):DT(I390) DC(J440):DG(I389) DA(J441):DT(I388) DT(J442):DA(I387) DG(J443):DC(I386) DC(J444):DG(I385) DA(J445):DT(I384) DC(J446):DG(I383) DA(J447):DT(I382) DG(J448):DC(I381) DG(J449):DC(I380) DA(J450):DT(I379) DT(J451):DA(I378) DG(J452):DC(I377) DT(J453):DA(I376) DA(J454):DT(I375) DT(J455):DA(I374) DA(J456):DT(I373) DT(J457):DA(I372) DA(J458):DT(I371) DT(J459):DA(I370) DG(J460):DC(I369) DT(J461):DA(I368) DG(J462):DC(I367) DA(J463):DT(I366) DC(J464):DG(I365) DA(J465):DT(I364) DC(J466):DG(I363) DG(J467):DC(I362) DT(J468):DA(I361) DG(J469):DC(I360) DC(J470):DG(I359) DC(J471):DG(I358) DT(J472):DA(I357) DG(J473):DC(I356) DG(J474):DC(I355) DA(J475):DT(I354) DG(J476):DC(I353) DA(J477):DT(I352) DC(J478):DG(I351) DT(J479):DA(I350) DA(J480):DT(I349) DG(J481):DC(I348) DG(J482):DC(I347) DG(J483):DC(I346) DA(J484):DT(I345) DG(J485):DC(I344) DT(J486):DA(I343) DA(J487):DT(I342) DA(J488):DT(I341) DT(J489):DA(I340) DC(J490):DG(I339) DC(J491):DG(I338) DC(J492):DG(I337) DC(J493):DG(I336) DT(J494):DA(I335) DT(J495):DA(I334) DG(J496):DC(I333) DG(J497):DC(I332) DC(J498):DG(I331) DG(J499):DC(I330) DG(J500):DC(I329) DT(J501):DA(I328) DT(J502):DA(I327) DA(J503):DT(I326) DA(J504):DT(I325) DA(J505):DT(I324) DA(J506):DT(I323) DC(J507):DG(I322) DG(J508):DC(I321) DC(J509):DG(I320) DG(J510):DC(I319) DG(J511):DC(I318) DG(J512):DC(I317) DG(J513):DC(I316) DG(J514):DC(I315) DA(J515):DT(I314) DC(J516):DG(I313) DA(J517):DT(I312) DG(J518):DC(I311) DC(J519):DG(I310) DG(J520):DC(I309) DC(J521):DG(I308) DG(J522):DC(I307) DT(J523):DA(I306) DA(J524):DT(I305) DC(J525):DG(I304) DG(J526):DC(I303) DT(J527):DA(I302) DG(J528):DC(I301) DC(J529):DG(I300) DG(J530):DC(I299) DT(J531):DA(I298) DT(J532):DA(I297) DT(J533):DA(I296) DA(J534):DT(I295) DA(J535):DT(I294) DG(J536):DC(I293) DC(J537):DG(I292) DG(J538):DC(I291) DG(J539):DC(I290) DT(J540):DA(I289) DG(J541):DC(I288) DC(J542):DG(I287) DT(J543):DA(I286) DA(J544):DT(I285) DG(J545):DC(I284) DA(J546):DT(I283) DG(J547):DC(I282) DC(J548):DG(I281) DT(J549):DA(I280) DG(J550):DC(I279) DT(J551):DA(I278) DC(J552):DG(I277) DT(J553):DA(I276) DA(J554):DT(I275) DC(J555):DG(I274) DG(J556):DC(I273) DA(J557):DT(I272) DC(J558):DG(I271) DC(J559):DG(I270) DA(J560):DT(I269) DA(J561):DT(I268) DT(J562):DA(I267) DT(J563):DA(I266) DG(J564):DC(I265) DA(J565):DT(I264) DG(J566):DC(I263) DC(J567):DG(I262) DG(J568):DC(I261) DG(J569):DC(I260) DC(J570):DG(I259) DC(J571):DG(I258) DT(J572):DA(I257) DC(J573):DG(I256) DG(J574):DC(I255) DG(J575):DC(I254) DC(J576):DG(I253) DA(J577):DT(I252) DC(J578):DG(I251) DC(J579):DG(I250) DG(J580):DC(I249) DG(J581):DC(I248) DG(J582):DC(I247) DA(J583):DT(I246) DT(J584):DA(I245) DT(J585):DA(I244) DC(J586):DG(I243) DT(J587):DA(I242) DC(J588):DG(I241) DC(J589):DG(I240) DA(J590):DT(I239) DG(J591):DC(I238) DT(J592):DA(I237) DG(J593):DC(I236) DG(J594):DC(I235) DC(J595):DG(I234) DC(J596):DG(I233) DA(J597):DT(I232) DG(J598):DC(I231) DT(J599):DA(I230) DG(J600):DC(I229) DG(J601):DC(I228) chaing ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >7pfx_Q:Histone-fold; title=NUCLEOSOME 3 OF THE 4X207 NUCLEOSOME ARRAY CONTAINING H1 organism=? DNA sequence DG(I430):DC(J399) DG(I431):DC(J398) DC(I432):DG(J397) DC(I433):DG(J396) DG(I434):DC(J395) DC(I435):DG(J394) DC(I436):DG(J393) DA(I437):DT(J392) DC(I438):DG(J391) DT(I439):DA(J390) DG(I440):DC(J389) DG(I441):DC(J388) DC(I442):DG(J387) DC(I443):DG(J386) DA(I444):DT(J385) DC(I445):DG(J384) DT(I446):DA(J383) DG(I447):DC(J382) DG(I448):DC(J381) DA(I449):DT(J380) DG(I450):DC(J379) DA(I451):DT(J378) DA(I452):DT(J377) DT(I453):DA(J376) DC(I454):DG(J375) DC(I455):DG(J374) DC(I456):DG(J373) DG(I457):DC(J372) DG(I458):DC(J371) DT(I459):DA(J370) DG(I460):DC(J369) DC(I461):DG(J368) DC(I462):DG(J367) DG(I463):DC(J366) DA(I464):DT(J365) DG(I465):DC(J364) DG(I466):DC(J363) DC(I467):DG(J362) DC(I468):DG(J361) DG(I469):DC(J360) DC(I470):DG(J359) DT(I471):DA(J358) DC(I472):DG(J357) DA(I473):DT(J356) DA(I474):DT(J355) DT(I475):DA(J354) DT(I476):DA(J353) DG(I477):DC(J352) DG(I478):DC(J351) DT(I479):DA(J350) DC(I480):DG(J349) DG(I481):DC(J348) DT(I482):DA(J347) DA(I483):DT(J346) DG(I484):DC(J345) DA(I485):DT(J344) DC(I486):DG(J343) DA(I487):DT(J342) DG(I488):DC(J341) DC(I489):DG(J340) DT(I490):DA(J339) DC(I491):DG(J338) DT(I492):DA(J337) DA(I493):DT(J336) DG(I494):DC(J335) DC(I495):DG(J334) DA(I496):DT(J333) DC(I497):DG(J332) DC(I498):DG(J331) DG(I499):DC(J330) DC(I500):DG(J329) DT(I501):DA(J328) DT(I502):DA(J327) DA(I503):DT(J326) DA(I504):DT(J325) DA(I505):DT(J324) DC(I506):DG(J323) DG(I507):DC(J322) DC(I508):DG(J321) DA(I509):DT(J320) DC(I510):DG(J319) DG(I511):DC(J318) DT(I512):DA(J317) DA(I513):DT(J316) DC(I514):DG(J315) DG(I515):DC(J314) DC(I516):DG(J313) DG(I517):DC(J312) DC(I518):DG(J311) DT(I519):DA(J310) DG(I520):DC(J309) DT(I521):DA(J308) DC(I522):DG(J307) DC(I523):DG(J306) DC(I524):DG(J305) DC(I525):DG(J304) DC(I526):DG(J303) DG(I527):DC(J302) DC(I528):DG(J301) DG(I529):DC(J300) DT(I530):DA(J299) DT(I531):DA(J298) DT(I532):DA(J297) DT(I533):DA(J296) DA(I534):DT(J295) DA(I535):DT(J294) DC(I536):DG(J293) DC(I537):DG(J292) DG(I538):DC(J291) DC(I539):DG(J290) DC(I540):DG(J289) DA(I541):DT(J288) DA(I542):DT(J287) DG(I543):DC(J286) DG(I544):DC(J285) DG(I545):DC(J284) DG(I546):DC(J283) DA(I547):DT(J282) DT(I548):DA(J281) DT(I549):DA(J280) DA(I550):DT(J279) DC(I551):DG(J278) DT(I552):DA(J277) DC(I553):DG(J276) DC(I554):DG(J275) DC(I555):DG(J274) DT(I556):DA(J273) DA(I557):DT(J272) DG(I558):DC(J271) DT(I559):DA(J270) DC(I560):DG(J269) DT(I561):DA(J268) DC(I562):DG(J267) DC(I563):DG(J266) DA(I564):DT(J265) DG(I565):DC(J264) DG(I566):DC(J263) DC(I567):DG(J262) DA(I568):DT(J261) DC(I569):DG(J260) DG(I570):DC(J259) DT(I571):DA(J258) DG(I572):DC(J257) DT(I573):DA(J256) DC(I574):DG(J255) DA(I575):DT(J254) DC(I576):DG(J253) DA(I577):DT(J252) DT(I578):DA(J251) DA(I579):DT(J250) DT(I580):DA(J249) DA(I581):DT(J248) DT(I582):DA(J247) DA(I583):DT(J246) DC(I584):DG(J245) DA(I585):DT(J244) DT(I586):DA(J243) DC(I587):DG(J242) DC(I588):DG(J241) DT(I589):DA(J240) DG(I590):DC(J239) DT(I591):DA(J238) DG(I592):DC(J237) DC(I593):DG(J236) DA(I594):DT(J235) DT(I595):DA(J234) DG(I596):DC(J233) DT(I597):DA(J232) DA(I598):DT(J231) DA(I599):DT(J230) DG(I600):DC(J229) DT(I601):DA(J228) DG(I602):DC(J227) DC(I603):DG(J226) DA(I604):DT(J225) DT(I605):DA(J224) DG(I606):DC(J223) chainQ ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >7pgv_E:Histone-fold; title=H3K36 TRI-METHYLATED NUCLEOSOME LEDGF PWWP DOMAIN COMPLEX organism=? DNA sequence DC(J-72):DG(I72) DA(J-71):DT(I71) DG(J-70):DC(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger >7pgw_C:Histone-fold; title=H3K36 TRI-METHYLATED NUCLEOSOME LEDGF PWWP DOMAIN COMPLEX POSE 2 organism=? DNA sequence DC(J-72):DG(I72) DA(J-71):DT(I71) DG(J-70):DC(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >7ph5_C:Histone-fold; title=H3K36 DI-METHYLATED NUCLEOSOME LEDGF PWWP DOMAIN COMPLEX organism=? DNA sequence DC(J-72):DG(I72) DA(J-71):DT(I71) DG(J-70):DC(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >7ph6_C:Histone-fold; title=H3K36 DI-METHYLATED NUCLEOSOME LEDGF PWWP DOMAIN COMPLEX organism=? DNA sequence DC(J-72):DG(I72) DA(J-71):DT(I71) DG(J-70):DC(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >7pii_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF THE HUMAN CCAN CENP-A ALPHA-SATELLITE COMPLEX organism=HOMO SAPIENS DNA sequence DA(I-49):DT(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DG(I-38):DC(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DC(I-34):DG(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DT(I-23):DA(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DC(I-2):DG(J2) DT(I-1):DA(J1) DG(I0):DC(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DT(I10):DA(J-10) DG(I11):DC(J-11) DC(I12):DG(J-12) DA(I13):DT(J-13) DA(I14):DT(J-14) DT(I15):DA(J-15) DC(I16):DG(J-16) DA(I17):DT(J-17) DT(I18):DA(J-18) DC(I19):DG(J-19) DA(I20):DT(J-20) DC(I21):DG(J-21) DA(I22):DT(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DA(I27):DT(J-27) DG(I28):DC(J-28) DT(I29):DA(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DC(I32):DG(J-32) DT(I33):DA(J-33) DG(I34):DC(J-34) DA(I35):DT(J-35) DG(I36):DC(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DG(I40):DC(J-40) DC(I41):DG(J-41) DT(I42):DA(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DT(I47):DA(J-47) DT(I48):DA(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DT(I53):DA(J-53) DT(I54):DA(J-54) DT(I55):DA(J-55) DT(I56):DA(J-56) DA(I57):DT(J-57) DT(I58):DA(J-58) DG(I59):DC(J-59) DT(I60):DA(J-60) DG(I61):DC(J-61) DA(I62):DT(J-62) DA(I63):DT(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) chainA ( 25) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 20) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence srrrqgwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpni/rkesysvyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/gwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl/lrdniqgitkpairrlarrGgvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/rkesysvyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >7pii_B:Histone-fold; title=STRUCTURE OF THE HUMAN CCAN CENP-A ALPHA-SATELLITE COMPLEX organism=? DNA sequence DA(I-49):DT(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DG(I-38):DC(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DC(I-34):DG(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DT(I-23):DA(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DC(I-20):DG(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DC(I-2):DG(J2) DT(I-1):DA(J1) DG(I0):DC(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DT(I10):DA(J-10) DG(I11):DC(J-11) DC(I12):DG(J-12) DA(I13):DT(J-13) DA(I14):DT(J-14) DT(I15):DA(J-15) DC(I16):DG(J-16) DA(I17):DT(J-17) DT(I18):DA(J-18) DC(I19):DG(J-19) DA(I20):DT(J-20) DC(I21):DG(J-21) DA(I22):DT(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DA(I27):DT(J-27) DG(I28):DC(J-28) DT(I29):DA(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DC(I32):DG(J-32) DT(I33):DA(J-33) DG(I34):DC(J-34) DA(I35):DT(J-35) DG(I36):DC(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DG(I40):DC(J-40) DC(I41):DG(J-41) DT(I42):DA(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DT(I47):DA(J-47) DT(I48):DA(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DT(I53):DA(J-53) DT(I54):DA(J-54) DT(I55):DA(J-55) DT(I56):DA(J-56) DA(I57):DT(J-57) DT(I58):DA(J-58) DG(I59):DC(J-59) DT(I60):DA(J-60) DG(I61):DC(J-61) DA(I62):DT(J-62) DA(I63):DT(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >7pik_ABC:Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF E. COLI TNSB IN COMPLEX WITH RIGHT END FRAGMENT OF TN7 TRANSPOSON organism=ESCHERICHIA COLI DNA sequence DG(L8):DC(K63) DG(L9):DC(K62) DA(L10):DT(K61) DC(L11):DG(K60) DA(L12):DT(K59) DA(L13):DT(K58) DT(L14):DA(K57) DA(L15):DT(K56) DA(L16):DT(K55) DA(L17):DT(K54) DG(L18):DC(K53) DT(L19):DA(K52) DC(L20):DG(K51) DT(L21):DA(K50) DT(L22):DA(K49) DA(L23):DT(K48) DA(L24):DT(K47) DA(L25):DT(K46) DC(L26):DG(K45) DT(L27):DA(K44) DG(L28):DC(K43) DA(L29):DT(K42) DA(L30):DT(K41) DC(L31):DG(K40) DA(L32):DT(K39) DA(L33):DT(K38) DA(L34):DT(K37) DA(L35):DT(K36) DT(L36):DA(K35) DA(L37):DT(K34) DG(L38):DC(K33) DA(L39):DT(K32) DT(L40):DA(K31) DC(L41):DG(K30) DT(L42):DA(K29) DA(L43):DT(K28) DA(L44):DT(K27) DA(L45):DT(K26) DC(L46):DG(K25) DT(L47):DA(K24) DA(L48):DT(K23) DT(L49):DA(K22) DG(L50):DC(K21) DA(L51):DT(K20) DC(L52):DG(K19) DA(L53):DT(K18) DA(L54):DT(K17) DT(L55):DA(K16) DA(L56):DT(K15) DA(L57):DT(K14) DA(L58):DT(K13) DG(L59):DC(K12) DT(L60):DA(K11) DC(L61):DG(K10) DT(L62):DA(K9) DT(L63):DA(K8) DA(L64):DT(K7) DA(L65):DT(K6) DA(L66):DT(K5) DC(L67):DG(K4) DT(L68):DA(K3) DA(L69):DT(K2) DG(L70):DC(K1) chainA (115) THR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) LYS116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ALA117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) THR118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) TYR120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) SER143 0 0 0 0 0 0 0 0 2 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG150 0 0 0 0 0 0 10 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (115) THR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) LYS116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ALA117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) THR118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) TYR120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) TYR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) ILE158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) ARG160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) ARG223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 13 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) TYR227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 34) LYS34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (116) LYS116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 (117) ALA117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (120) TYR120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (140) TYR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (143) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 (150) ARG150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) ARG223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) ARG226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) TYR227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mwqinevvlfdndpyrilaiedgqvvwmqisadkgvpqaraelllmqyldegrlvrtddpyvhldleepsvdsvsfqkreedyrkilpiinskdrfdpkvrselvehvvqehkvTKATvYkllrrywqrgqtpnalipdyknSgapgerRs/mwqinevvlfdndpyrilaiedgqvvwmqisadkgvpqaraelllmqyldegrlvrtddpyvhldleepsvdsvsfqkreedyrkilpiinskdrfdpkvrselvehvvqehkvTKATvYkllrrywqrgqtpnalipdYknSgapgerRsatgtakIgRaregegtkvtpeierlfrltiekhllnqkgtkttvayrrfvdlfaqyfpripqedyptlRqfrYfydreypkaalgpgsryeidatiadiylvdhhdrqkiigrptlyividvfsrmitgfyigfenpsyvvamqafvnacsdktaicaqhdieisssdwpcvglpdvlladrgelmshqvealvssfnvrvesapprrgdakgivestfrtlqaefksfapgaslsvfeftqiilrtilfrnnhlvmdkydrdadfptdlpsipvqlwqwgmqhrtgslraveqeqlrvallprrkvsissfgvnlwglyysgseilregwpqhleaaydpvlvdtiylfpqvgsrvfwrcnltersrqfkglsfwevwdiqaqekhnka/mwqinevvlfdndpyrilaiedgqvvwmqisadKgvpqaraelllmqyldegrlvrtddpyvhldleepsvdsvsfqkreedyrkilpiinskdrfdpkvrselvehvvqehkvtKAtvYkllrrywqrgqtpnalipdYknSgapgerRgtkvtpeierlfrltiekhllnqkgtkttvayrrfvdlfaqyfpripqedyptlRqfRYfydreypkalgpgsryeidatiadiylvdhhdrqkiigrptlyividvfsrmitgfyigfenpsyvvamqafvnacsdktaicaqhdieisssdwpcvglpdvlladrgelmshqvealvssfnvrvesapprrgdakgivestfrtlqaefksfapgiaslsvfeftqiilrtilfrnnhlvmdkydrdadfptdlpsipvqlwqwgmqhrtgslraveqeqlrvallprrkvsissfgvnlwglyysgseilregwlqrstqhleaaydpvlvdtiylfpqvgsrvfwrcnltersrqfkglsfwevwdiqaqekhnkanakqdeltkrreleafiqqtiqkankl >7pik_B:Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF E. COLI TNSB IN COMPLEX WITH RIGHT END FRAGMENT OF TN7 TRANSPOSON organism=ESCHERICHIA COLI DNA sequence DC(K1):DG(L70) DT(K2):DA(L69) DA(K3):DT(L68) DG(K4):DC(L67) DT(K5):DA(L66) DT(K6):DA(L65) DT(K7):DA(L64) DA(K8):DT(L63) DA(K9):DT(L62) DG(K10):DC(L61) DA(K11):DT(L60) DC(K12):DG(L59) DT(K13):DA(L58) DT(K14):DA(L57) DT(K15):DA(L56) DA(K16):DT(L55) DT(K17):DA(L54) DT(K18):DA(L53) DG(K19):DC(L52) DT(K20):DA(L51) DC(K21):DG(L50) DA(K22):DT(L49) DT(K23):DA(L48) DA(K24):DT(L47) DG(K25):DC(L46) DT(K26):DA(L45) DT(K27):DA(L44) DT(K28):DA(L43) DA(K29):DT(L42) DG(K30):DC(L41) DA(K31):DT(L40) DT(K32):DA(L39) DC(K33):DG(L38) DT(K34):DA(L37) DA(K35):DT(L36) DT(K36):DA(L35) DT(K37):DA(L34) DT(K38):DA(L33) DT(K39):DA(L32) DG(K40):DC(L31) DT(K41):DA(L30) DT(K42):DA(L29) DC(K43):DG(L28) DA(K44):DT(L27) DG(K45):DC(L26) DT(K46):DA(L25) DT(K47):DA(L24) DT(K48):DA(L23) DA(K49):DT(L22) DA(K50):DT(L21) DG(K51):DC(L20) DA(K52):DT(L19) DC(K53):DG(L18) DT(K54):DA(L17) DT(K55):DA(L16) DT(K56):DA(L15) DA(K57):DT(L14) DT(K58):DA(L13) DT(K59):DA(L12) DG(K60):DC(L11) DT(K61):DA(L10) DC(K62):DG(L9) DC(K63):DG(L8) chainB (115) THR115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) LYS116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ALA117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) THR118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) TYR120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) TYR140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) ILE158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) ARG160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) ARG223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) TYR227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mwqinevvlfdndpyrilaiedgqvvwmqisadkgvpqaraelllmqyldegrlvrtddpyvhldleepsvdsvsfqkreedyrkilpiinskdrfdpkvrselvehvvqehkvTKATvYkllrrywqrgqtpnalipdYknSgapgerRsatgtakIgRaregegtkvtpeierlfrltiekhllnqkgtkttvayrrfvdlfaqyfpripqedyptlRqfrYfydreypkaalgpgsryeidatiadiylvdhhdrqkiigrptlyividvfsrmitgfyigfenpsyvvamqafvnacsdktaicaqhdieisssdwpcvglpdvlladrgelmshqvealvssfnvrvesapprrgdakgivestfrtlqaefksfapgaslsvfeftqiilrtilfrnnhlvmdkydrdadfptdlpsipvqlwqwgmqhrtgslraveqeqlrvallprrkvsissfgvnlwglyysgseilregwpqhleaaydpvlvdtiylfpqvgsrvfwrcnltersrqfkglsfwevwdiqaqekhnka >7pks_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURAL BASIS OF INTEGRATOR-MEDIATED TRANSCRIPTION REGULATION organism=? DNA sequence DT(T9):DA(N40) DT(T10):DA(N39) DA(T11):DT(N38) DT(T12):DA(N37) DT(T13):DA(N36) DG(T14):DC(N35) DA(T15):DT(N34) DG(T16):DC(N33) DG(T17):DC(N32) DC(T18):DG(N31) DT(T19):DA(N30) DT(T20):DA(N29) DA(T21):DT(N28) DA(T22):DT(N27) DG(T23):DC(N26) DC(T24):DG(N25) DA(T25):DA(N24) DG(T26):DT(N14) DT(T27):DC(N13) DG(T28):DC(N12) DG(T29):DA(N11) DG(T30):DT(N10) DT(T31):DG(N9) DT(T32):DA(N8) chainA (234) LYS285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (803) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (1324) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavrnqddlthkladivKinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygm >7pks_ABE: title=STRUCTURAL BASIS OF INTEGRATOR-MEDIATED TRANSCRIPTION REGULATION organism=? DNA sequence DT(T9):DA(N40) DT(T10):DA(N39) DA(T11):DT(N38) DT(T12):DA(N37) DT(T13):DA(N36) DG(T14):DC(N35) DA(T15):DT(N34) DG(T16):DC(N33) DG(T17):DC(N32) DC(T18):DG(N31) DT(T19):DA(N30) DT(T20):DA(N29) DA(T21):DT(N28) DA(T22):DT(N27) DG(T23):DC(N26) DC(T24):DG(N25) DA(T25):DA(N24) DG(T26):DT(N14) DT(T27):DC(N13) DG(T28):DC(N12) DG(T29):DA(N11) DG(T30):DT(N10) DT(T31):DG(N9) DT(T32):DA(N8) chainA (234) LYS285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (803) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (1324) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainB (442) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 (444) LYS494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainE prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavrnqddlthkladivKinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygm/ddeitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqppryllkfeqiylskpthwdgapspmmpnearlrnltysaplyvditktvqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdaragvsqvlnrltfastlshlrrlnspigrDgKlakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlperrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >7pla_A: title=CRYO-EM STRUCTURE OF SHCAS12K IN COMPLEX WITH A SGRNA AND A DSDNA TARGET organism=SCYTONEMA HOFMANNII DNA sequence DT(D11):DA(C40) DA(D12):DT(C39) DG(D13):DC(C38) DG(D14):DC(C37) DA(D15):DT(C36) DG(D16):DC(C35) DG(D17):DC(C34) DT(D18):DA(C33) DT(D19):DA(C32) chainA ( 62) ARG78 0 0 0 0 0 9 12 6 0 ( 65) MET81 0 0 0 0 0 0 0 1 1 ( 69) HIS85 0 0 0 0 0 0 0 0 1 ( 88) THR287 0 0 0 0 0 0 0 5 5 (107) ASN306 0 0 0 0 6 2 0 0 0 (219) LEU418 0 0 0 0 0 0 0 0 1 (222) ARG421 0 0 0 0 0 1 20 12 1 prot.sequence nasqitiqarlisfesnrqqlwklmadlntplinellcqlgqhpstvvsqlcqplktdppsRlyMsaiHivdyiykswslpfplvfeTnedmvwsknqkgrlcvhfNglsdlifevycgnrqlhwfqrfledqqtkrksknqhssglftlrnghlvwlegegkgepwnlhhltlyccvdnrlwteegteivrqekadeitkfitnmkkksdlsdtqqaLiqRkqstltrinnsferpsqplyqgqshilvgvslglekpatvavvdaiankvlayrsikqllgdnyellnrqrrqqqylsherhkaqknfspnqfgaselgqhidrllakaivalartykagsivlpklgdmrevvqseiqaiaeqkfpgyiegqqkyakqyrvnvhrwsygrliqsiqskaaqtgivieegkqpirgsphdkakelalsaynlrlt >7plo_34567KLO: title=H. SAPIENS REPLISOME-CUL2/LRR1 COMPLEX organism=? DNA sequence DT(M26):DA(N23) DT(M27):DA(N22) DA(M28):DT(N21) DG(M29):DC(N20) DA(M30):DT(N19) DG(M31):DC(N18) DA(M32):DT(N17) DA(M33):DT(N16) DT(M34):DA(N15) DT(M35):DA(N14) DG(M36):DC(N13) DG(M37):DC(N12) DA(M38):DT(N11) DG(M39):DC(N10) DA(M40):DT(N9) DG(M41):DC(N8) DT(M42):DA(N7) DG(M43):DC(N6) DT(M44):DA(N5) DG(M45):DC(N4) DT(M46):DA(N3) DT(M47):DC(N2) chain3 chain4 (246) ARG404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 chain5 (189) LEU209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chain6 chain7 (271) PHE285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 10 (272) ARG286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (273) GLN287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (274) VAL288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 (275) VAL289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainK (315) ARG321 0 0 0 0 0 0 4 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL chainO prot.sequence agtvvlddvelreaqrdyldflddeedqgiyqskvrelisdnqyrlivnvndlrrknekranrllnnafeelvafqralkdfvasidatyakqyeefyvglegsfgskhvsprtltscflscvvcvegivtkcslvrpkvvrsvhycpatkktierrysdlttlvafpsssvyptkdeennpleteyglsvykdhqtitiqempekapagqlprsvdvildddlvdkakpgdrvqvvgtyrclpgkkggytsgtfrtvliacnvkqmskdiakikkfsktrskdifdqlakslapsihghdyvkkailclllggverdlengshirgdinilligdpsvaksqllryvlctapraipttgrgssgvgltaavttdqetgerrleagamvladrgvvcidefdkmsdmdrtaihevmeqgrvtiakagiharlnarcsvlaaanpvygrydqyktpmeniglqdsllsrfdllfimldqmdpeqdreisdhvlrmhryrapgeqdgdamplgsavdilatddpnlhgtkkkkekmvsaafmkkyihvakiikpvltqesatyiaeeysrlrsqdsmssdtartspvtartletlirlatahakarmsktvdlqdaeeavelvqyayfkk/lgqklviwgtdvnvaackenfqrflqrfidplplymqrlgeinvigepflnvncehiksfdknlyrqlisypqeviptfdmavneiffdrypdsilehqiqvrpfnalktknmrnlnpedidqlitisgmvirtsqlipemqeaffqcqvcahttrvemdrgriaepsvcgrchtthsmalihnrslfsdkqmiklqespedmpagqtphtvilfahndlvdkvqpgdrvnvtgiyravpirvnpRvsnvksvykthidvihyrktdaksekrvellkelsrkpdiyerlasalapsiyehedikkgillqlfggtrkdgkfraeinillcgdpgtsksqllqyvynlvprgqytsgkgssavgltayvmkdpetrqlvlqtgalvlsdngiccidefdkmnestrsvlhevmeqqtlsiakagiicqlnartsvlaaanpiesqwnpkkttieniqlphtllsrfdlifllldpqdeaydrrlahhlvalyyqseeqaeeelldmavlkdyiayahstimprlseeasqalieayvdmrkigssrgmvsayprqleslirlaeahakvrlsnkveaidveeakrlhrealkqsatdprtgivdisilttgmsatsrkr/adegqarksqlqrrfkeflrqyrvgtdrtgftfkyrdelkrhynlgeywievemedlasfdedladylykqpaehlqlleeaakevadevtrprpsgeevlqdiqvmlksdaspssirslksdmmshlvkipgiiiaasavrakatrisiqcrscrntltniamrpglegyalprkcntdqagrpkcpLdpyfimpdkckcvdfqtlklqelpdavphgemprhmqlycdrylcdkvvpgnrvtimgiysikkfvgvgirssyirvlgiqvdtgavspqeeeefrrlaalpnvyevisksiapsifggtdmkkaiacllfggsrkrlpdgltrrgdinllmlgdpgtaksqllkfvekcspigvytsgkgssaagltasvmrdpssrnfimeggamvladggvvcidefdkmreddrvaiheameqqtisiakagitttlnsrcsvlaaansvfgrwdetkgednidfmptilsrfdmifivkdehneerdvmlakhvitlhvsaltqtqavegeidlaklkkfiaycrvkcgprlsaeaaeklknryiimrsgarqherdsdrrssipitvrqleaivriaealskmklqpfateadveealrlfqvstldaa/laaaaepgagsqhlevrdevaekcqklfldfleefqssdgeikylqlaeelirperntlvvsfvdleqfnqqlsttiqeefyrvypylcralktfvkdrkeiplakdfyvafqdlptrhkireltssriglltrisgqvvrthpvhpelvsgtflcldcqtvirdveqqfkytqpnicrnpvcanrrrFlldtnksrfvdfqkvriqetqaelprgsiprslevilraeavesaqagdkcdftgtlivvpdvsklstpgaraeetegirglralgvrdlsyrlvflaccvaptnptaesiknqmtvkewekvfemsqdknlyhnlctslfptihgndevkrgvllmlfggvpkttgegtslrgdinvcivgdpstaksqflkhveefspravytsgkassaagltaavvrdeeshefvieagalmladngvccidefdkmdvrdqvaiheameqqtisitkagvkatlnartsilaaanpisghydrskslkqninlsapimsrfdlffilvdecnevtdyaiarrivdlhsrievyslddirryllfarqfkpkiskesedfiveqykhlrqrdgsgvtksswritvrqlesmirlseamarmhccdevqpkhvkeafrllnksiirvet/lkdyalekekvkkflqefyqddelgkkqfkygnqlvrlahreqvalyvdlddvaeddpelvdsicenarryaklfadavqellpqykerevvnkdvldvyiehrlmmeqrsrpaelmrrfelyfqgpssnkprvirevradsvgklvtvrgivtrvsevkpkmvvatytcdqcgaetyqpiqsptfmplimcpsqecqtnrsggrlylqtrgsrfikfqemkmqehsdqvpvgniprsitvlvegentriaqpgdhvsvtgiflpilrtgFRQVVqgllsetyleahrivkmdfyeklaasiapeiyghedvkkalllllvggvdqsprgmkirgniniclmgdpgvaksqllsyidrlaprsqyttgrgssgvgltaavlrdsvsgeltleggalvladqgvccidefdkmaeadrtaihevmeqqtisiakagilttlnarcsilaaanpaygrynprrsleqniqlpaallsrfdllwliqdrpdrdndlrlaqhityvhqhsrqppsqfepldmklmrryiamcrekqpmvpesladyitaayvemrreawaskdatytsartllailrlstalarlrmvdvvekedvneairlmemskdsll/ncellatcsalgylegdtyhkepdclesvkdlirylrhedetrdvrqqlgaaqilqsdllpiltqhhqdkplfdavirlmvnltqpallcfgnlpkepsfrhhflqvltylqaykeafasekafgvlsetlyellqlgweerqeednllierilllvrnilhvpadldqekkidddasahdqllwaihlsglddlllflasssaeeqwslhvleivslmfrdqnpeqlagvgqgrlaqersadfaelevlrqremaekktralqrgnrhsrfggsyivqglksigerdlifhkglhnlrnyssdlgkqpkkvpkRrqaarelsiqrrsalnvrlflrdfcseflencynrlmgsvkdhllrekaqqhdetyymwalaffmafnraasfrpglvsetlsvrtfhfieqnltnyyemmltdrkeaaswarrmhlalkayqellatvnemdispdeavressriiknnifyvmeyrelflalfrkfdercqprsflrdlvetthlflkmlerfcrsrgnlvvqsekefnfldylkrfacstvvrayvlllrsyqqnsahtnhcivkmlhrlahdlkmeallfqlsvfclfnrllsdpaagaykelvtfakyilgkffalaavnqkafvellfwkntavvrem/rnipkldaqrliserglpalrhvfdkakfkgkgheaedlkmlirhmehwahrlfpklqfedfidrveylgskkevqtclkrirldl/mklhcevevisrhlpalglrnrgkgvravlslcqvrafllistlkdkrgtryelrenieqfftkfvdegkatvrlkeppvdiclskaissslkgflsamrlahrgcnvefenfktkmvitskkdyplsknfpyslehlqtsycglvrvdmrmlclkslrkldlshnhikklpatigdlihlqelnlndnhlesfsvalchstlqkslrsldlsknkikalpvqfcqlqelknlklddneliqfpckigqlinlrflsaarnklpflpsefrnlsleyldlfgntfeqpkvlpviklqapltllessartilhipFhlcqdldtakicvcgrfclnsfiqgtttmnlhsvahtvvlvdnlggteapiisyfcslgcyvnssdm >7pmk_234567XY: title=S. CEREVISIAE REPLISOME-SCF(DIA2) COMPLEX BOUND TO DOUBLE-STRANDED DNA (CONFORMATION I) organism=? DNA sequence DG(I4):DC(J122) DG(I5):DC(J121) DG(I6):DC(J120) DG(I7):DC(J119) DG(I8):DC(J118) DG(I9):DC(J117) DG(I10):DC(J116) DG(I11):DC(J115) DG(I12):DC(J114) DG(I13):DC(J113) DG(I14):DC(J112) DG(I15):DC(J111) DG(I16):DC(J110) DG(I17):DC(J109) DG(I18):DC(J108) DG(I19):DC(J107) DG(I20):DC(J106) DG(I21):DC(J105) DT(I101):DC(J104) DT(I102):DC(J103) DT(I103):DC(J102) DT(I104):DC(J101) DT(I105):DA(J11) DG(I106):DC(J10) DG(I107):DC(J9) DG(I108):DC(J8) DG(I109):DC(J7) DG(I110):DC(J6) DG(I111):DC(J5) DG(I112):DC(J4) DG(I113):DC(J3) DG(I114):DC(J2) DG(I115):DC(J1) chain2 (403) TRP589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chain3 chain4 (276) ARG449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain5 (372) ARG455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) ARG460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (379) PHE462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 chain6 (423) ARG614 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (426) TYR621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chain7 chainX (346) ARG401 0 0 0 0 0 1 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainY prot.sequence didplreeltleslsnvkansysewitqpnvsrtiarelksflleytdetgrsvygarirtlgemnseslevnyrhlaeskailalflakcpeemlkifdlvameatelhypdyarihseihvrisdfptiyslrelresnlsslvrvtgvvtrrtgvfpqlkyvkfnclkcgsilgpffqdsneeirisfctnckskgpfrvngektvyrnyqrvtlqeapgtvppgrlprhrevilladlvdvskpgeevevtgiyknnydgnlnakngfpvfatiieansikrvfswteeeerefrkisrdrgiidkiissmapsiyghrdiktavacslfggvpknvngkhsirgdinvlllgdpgtaksqilkyvektahravfatgqgasavgltasvrkdpitkeWtleggalvladkgvclidefdkmndqdrtsiheameqqsisiskagivttlqarcsiiaaanpnggrynstlplaqnvsltepilsrfdilcvvrdlvdeeaderlatfvvdshvrshpenlnarqrrlqrqrkkeeeispipqellmkyihyartkiypklhqmdmdkvsrvyadlrresistgsfpitvrhlesilriaesfakmrlsefvssydldraikvvvdsfvdaqkvsvrrqlrrsfaiytlgh/fapdavfgdrvrrfqefldtftsyrdsvrsiqvynsnnaanynilphriiislddlrefdrsfwsgilvepayfippaekaltdladsmddhpwklsfkgsfgahalsprtltaqhlnklvsvegivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnkltteygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfkslgaggmnqsnsntligfktlilgntvyplharaarqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattgrgssgvgltaavttdretgerrleagamvlaDrgvvcidefdkmtdvdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrthrylppgylegepvrpklvtipflrkyvqyakervipqltqeainvivknytdlrndpitartletlirlatahakvrlsktvnkvdakvaanllrfallge/seplriiwgtnvsiqecttnfrnflmsfkykfrkildereefinnttdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransRqrvlkslyktyvdvvhvkkvdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktfryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitrlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledvlpvefltmyisyakehihpiiteaaktelvrayvgmrkmtattrqlesmirlaeahakmklknvveledvqeavrlirsaikd/ndddnteiiksfknfilefrldsqfiyrdqlrnnilvknysltvnmehligynediykklsdepsdiiplfetaitqvakrisilsraslptfqlilnsnanqiplrdldsehvskivrlsgiiistsvlssratylsimcrncrhttsitinnfnvslprsclsncgpdpyiiihesskfidqqflklqeipelvpvgemprnltmtcdryltnkvipgtrvtivgiysiynskngvairtpyikilgiqsdvetssiwnsvtmfteeeeeeflqlsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllgdpgtaksqllkfvekvspiavytsgkgssaagltasvqRdpmtReFyleggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanpiygryddlkspgdnidfqttilsrfdmifivkddhneerdisianhvinihtgnanamqnqqeengseisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinelesterssipitirqleaiiriteslaklelspiaqerhvdeairlfqastmdaasqeirrfeqelkrrlpigwstsyqtlrrefvdtqlaldkalyalekhetiqlrhqgqniyrsgv/sfksralnhvkkvddvtgekvreafeqfledfsvqstdtgevekvyraqiefmkiydlntiyidyqhlsmrengalamaiseqyyrflpflqkglrrvvrkyapellntsspeqtervfqisffnlptvhrirdirsekigsllsisgtvtrtsevrpelykasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsrfldwqkvriqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpdvtqlglpgvkpssnsgvtglrslgvrdltykisflachvisignerdqevflnslssdeinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsgkassaagltaavvRddYtieagalmladngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkppfsaeqlrryikyartfkpiltkearsylvekykelrkddaqgfsrssyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsiirv/aalpsiqlpvdynnlfneitdflvtfkqdtlsgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcraidnnmplptkeidykddvldvilnqrrlrnermlsdrelfppnltrryflyfkplsqnaisskplsvrqikgdflgqlitvrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflpapyaglltetyleaqfvrqhkdveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrkirgdinvclmgdpgvaksqllkaickisprgvyttgkltaavmkdpvtdemileggalvladNgiCcidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskrfsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyq/adfsltvlrariallataiggpdytppyklgddclaclkdlkrwfklvddqqkrwdvamavaeyriltddllpilidwenkcslaaklankayydkialnclqllvlmtwplivteqsssnqitlygelkkhqlvykktilsmesgkvlraairlaldvikidrlsrtprdnmvlklvlnffrnviaiepgeftintkksmpkkgitsidtlppnvsmddislntvissfhknkvfgflltltsslsdfiniplleimfyftkdvnqellfprtsagfelskllqkehqmrknvikhtsarhsrfggllsiqtpdktrltvsgsqalvdekialqklddskkwnkRiikkeglpnsllnsqtgkaifftesngkhfkefinnfidsgfnillhsvtnyftteqdrmvtleqveyllffawfvkyqllrskidnsadikqvsealkevtfilvssllrsaydlknwtvthagmiafnellnlvsrtkaaqdiefivsrlfsderiqllsnlpkigskyslqfmkscielthsvlkvleqysvnfqkvqanymtepvietyinflerfreleddsikkvfsffhrvfvqakeqallfrfdliillremlspdgldrmsrsrkyvsqfsdyflarlkkrlkkspawfvgllfpplhnsevgfyqryge/aitarkrrpqvkltaekllsdkglpyvlknahkririsskknsydnlsniiqfyqlwahelfpkakfkdfmkicqtvgktdpvlreyrvslfrdemgm >7pmn_23456LXY: title=S. CEREVISIAE REPLISOME-SCF(DIA2) COMPLEX BOUND TO DOUBLE-STRANDED DNA (CONFORMATION II) organism=? DNA sequence DC(J1):DG(I114) DC(J2):DG(I113) DC(J3):DG(I112) DC(J4):DG(I111) DC(J5):DG(I110) DC(J6):DG(I109) DC(J7):DG(I108) DC(J8):DG(I107) DC(J9):DG(I106) DC(J10):DT(I105) DA(J11):DT(I104) DC(J101):DT(I103) DC(J102):DG(I21) DC(J103):DG(I20) DC(J104):DG(I19) DC(J105):DG(I18) DC(J106):DG(I17) DC(J107):DG(I16) DC(J108):DG(I15) DC(J109):DG(I14) DC(J110):DG(I13) DC(J111):DG(I12) DC(J112):DG(I11) DC(J113):DG(I10) DC(J114):DG(I9) DC(J115):DG(I8) DC(J116):DG(I7) DC(J117):DG(I6) DC(J118):DG(I5) DC(J119):DG(I4) DC(J120):DG(I3) DC(J121):DG(I2) DC(J122):DG(I1) chain2 (397) LYS582 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) TRP589 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain3 chain4 (276) ARG449 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain5 (366) PHE462 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain6 (423) ARG614 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (430) TYR621 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL chainX (346) ARG401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 1 0 0 0 0 0 0 0 0 chainY prot.sequence didplreeltleslsnvkansysewitqpnvsrtiarelksflleytdetgrsvygarirtlgemnseslevnyrhlaeskailalflakcpeemlkifdlvameatelhypdyarihseihvrisdfptiyslrelresnlsslvrvtgvvtrrtgvfpqlkyvkfnclkcgsilgpffqdsneeirisfctnckskgpfrvngektvyrnyqrvtlqeapgtvppgrlprhrevilladlvdvskpgeevevtgiyknnydgnlnakngfpvfatiieansikrrvfswteeeerefrkisrdrgiidkiissmapsiyghrdiktavacslfggvpknvngkhsirgdinvlllgdpgtaksqilkyvektahravfatgqgasavgltasvrKdpitkeWtleggalvladkgvclidefdkmndqdrtsiheameqqsisiskagivttlqarcsiiaaanpnggrynstlplaqnvsltepilsrfdilcvvrdlvdeeaderlatfvvdshvrshpenlnarqrrlqrqrkkeeeispipqellmkyihyartkiypklhqmdmdkvsrvyadlrresistgsfpitvrhlesilriaesfakmrlsefvssydldraikvvvdsfvdaqkvsvrrqlrrsfaiytlgh/fapdavfgdrvrrfqefldtftsyrdsvrsiqvynsnnaanynilphriiislddlrefdrsfwsgilvepayfippaekaltdladsmddhpwklsfkgsfgahalsprtltaqhlnklvsvegivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnkltteygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfkslgaggmnqsnsntligfktlilgntvyplharaarqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattltaavttdretgerrleagamvladrGvvcideFdkmtdvdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrthrylppgylegepvrerlnlslavgpklvtipflrkyvqyakervipqltqeainvivknytdlrnddntkkspitartletlirlatahakvrlsktvnkvdakvaanllrfallge/seplriiwgtnvsiqecttnfrnflmsfkykfrkildereefinnttdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransRqrvlkslyktyvdvvhvkkvdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktfryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayilvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledvlpvefltmyisyakehihpiiteaaktelvrayvgmrkmtattrqlesmirlaeahakmklknvveledvqeavrlirsaikd/ndddnteiiksfknfilefrldsqfiyrdqlrnnilvknysltvnmehligynediykklsdepsdiiplfetaitqvakrisilsraslptfqlilnsnanqiplrdldsehvskivrlsgiiistsvlssratylsimcrncrhttsitinnfnvslprsclsncgpdpyiiihesskfidqqflklqeipelvpvgemprnltmtcdryltnkvipgtrvtivgiysiynskngvairtpyikilgiqsfteeeeeeflqlsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllgdpgtaksqllkfvekvspiavytsgkgssaagltasvqrdpmtreFyleggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanpiygryddlkspgdnidfqttilsrfdmifivkddhneerdisianhvinihtgnanamqnqqeengseisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinelesterssipitirqleaiiriteslaklelspiaqerhvdeairlfqastmdaasqeirrfeqelkrrlpigwstsyqtlrrefvdtqlaldkalyalekhetiqlrhqgqniyrsgv/sfksralnhvkkvddvtgekvreafeqfledfsvqstdtgevekvyraqiefmkiydlntiyidyqhlsmrengalamaiseqyyrflpflqkglrrvvrkyapellntsspeqtervfqisffnlptvhrirdirsekigsllsisgtvtrtsevrpelykasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsrfldwqkvriqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpdvtqlglpgvkpssnsgvtglrslgvrdltykisflachvisignerdqevflnslssdeinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsgkassaagltaavvRdeeggdYtieagalmladngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkppfsaeqlrryikyartfkpiltkearsylvekykelrkddaqgfsrssyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsiirv/pieilpiifqrfttkelvtlslvcnkwrdkilyhldcfqefnlapinfknfvkfmdflqqnftrtyrkyilsqvkvssritseelritqllfskmpkcinierlilsmptltttqifklmvrggtdfftrllelslmityrpdkqheleilqtcpllkkielifvnslvviyselekitlicdkkkiknfplcrallrgqfpllqkltitgvtfpmnnqdimnfqwllnfpdlkelwiedndncelskflqllkfsnvwknlekltfrenklypivnldedqpvtnddevpsmlfykenlqnlekldlmgtsisgsaltrlceqeyldgrklrslnigncpniqfpnnhahtarmildvnavlkrlskleeinlshlsslndstmksfiinvpflenlkrldishnfeitgisiyeflkkfqMdqplayLnidgcsqvshitvnmiraqnlvtqvdcvyerdvwrkfginsysys/adfsltvlrariallataiggpdytppyklgddclaclkdlkrwfklvddqqkrwdvamavaeyriltddllpilidwenkcslaaklankayydkialnclqllvlmtwplivteqsssnqitlygelkkhqlvykktilsmesgkvlraairlaldvikidrlsrtprdnmvlklvlnffrnviaiepgeftintkksmpkkgitsidtlppnvsmddislntvissfhknkvfgflltltsslsdfiniplleimfyftkdvnqellfprtsagfelskllqkehqmrknvikhtsarhsrfggllsiqtpdktrltvsgsqalvdekialqklddskkwnkRiikkeglpnsllnsqtgkaifftesngkhfkefinnfidsgfnillhsvtnyftteqdrmvtleqveyllffawfvkyqllrskidnsadikqvsealkevtfilvssllrsaydlknwtvthagmiafnellnlvsrtkaaqdiefivsrlfsderiqllsnlpkigskyslqfmkscielthsvlkvleqysvnfqkvqanymtepvietyinflerfreleddsikkvfsffhrvfvqakeqallfrfdliillremlspdgldrmsrsrkyvsqfsdyflarlkkrlkkspawfvgllfpplhnsevgfyqryge/aitarkrrpqvkltaekllsdkglpyvlknahkririsskknsydnlsniiqfyqlwahelfpkakfkdfmkicqtvgktdpvlreyrvslfrdemgm >7prv_A:Nuclear_receptor_ligand-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=THE GLUCOCORTICOID RECEPTOR IN COMPLEX WITH FLUTICASONE FUROATE, A PGC1A COACTIVATOR FRAGMENT AND SGK 23BP organism=Homo sapiens DNA sequence DT(D1):DA(C22) DA(D2):DT(C21) DC(D3):DG(C20) DA(D4):DT(C19) DG(D5):DC(C18) DA(D6):DT(C17) DA(D7):DT(C16) DC(D8):DG(C15) DA(D9):DT(C14) DT(D10):DA(C13) DT(D11):DA(C12) DT(D12):DA(C11) DT(D13):DA(C10) DG(D14):DC(C9) DT(D15):DA(C8) DC(D16):DG(C7) DC(D17):DG(C6) DG(D18):DC(C5) DT(D19):DA(C4) DC(D20):DG(C3) DG(D21):DC(C2) DA(D22):DT(C1) chainA ( 26) LYS442 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) VAL443 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG447 0 0 0 0 0 0 1 11 19 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ppklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlltptlvslleviepevlyagydssvpdstwrimttlnmlggrqmiaavkwakaipgfrnlhlddqmtllqyswmslmafalgwrsyrqssanllcfapdliineqrmtlpdmydqckhmlyvsselhrlqvsyeeylcmktllllssvpkdglksqelfdeirmtyikelgkaivkregnssqnwqrfyqltklldsmhevvenllnycfqtfldktmsiefpemlaeiitnqipkysngnikkllfhq >7prv_AB:Nuclear_receptor_ligand-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=THE GLUCOCORTICOID RECEPTOR IN COMPLEX WITH FLUTICASONE FUROATE, A PGC1A COACTIVATOR FRAGMENT AND SGK 23BP organism=Homo sapiens DNA sequence DT(C1):DA(D22) DC(C2):DG(D21) DG(C3):DC(D20) DA(C4):DT(D19) DC(C5):DG(D18) DG(C6):DC(D17) DG(C7):DC(D16) DA(C8):DT(D15) DC(C9):DG(D14) DA(C10):DT(D13) DA(C11):DT(D12) DA(C12):DT(D11) DA(C13):DT(D10) DT(C14):DA(D9) DG(C15):DC(D8) DT(C16):DA(D7) DT(C17):DA(D6) DC(C18):DG(D5) DT(C19):DA(D4) DG(C20):DC(D3) DT(C21):DA(D2) DA(C22):DT(D1) chainA ( 26) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 ( 27) VAL443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 ( 31) ARG447 0 0 0 0 0 0 0 0 0 0 0 0 0 19 11 1 0 0 0 0 0 0 chainB ( 15) HIS432 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS442 0 0 0 0 1 4 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG447 0 0 0 0 0 0 0 1 14 17 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ppklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlltptlvslleviepevlyagydssvpdstwrimttlnmlggrqmiaavkwakaipgfrnlhlddqmtllqyswmslmafalgwrsyrqssanllcfapdliineqrmtlpdmydqckhmlyvsselhrlqvsyeeylcmktllllssvpkdglksqelfdeirmtyikelgkaivkregnssqnwqrfyqltklldsmhevvenllnycfqtfldktmsiefpemlaeiitnqipkysngnikkllfhq/pklclvcsdeasgcHygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlqltptlvslleviepevlyagydssvpdstwrimttlnmlggrqmiaavkwakaipgfrnlhlddqmtllqyswmslmafalgwrsyrqssanllcfapdliineqrmtlpdmydqckhmlyvsselhrlqvsyeeylcmktllllssvpkdglksqelfdeirmtyikelgkaivkregnssqnwqrfyqltklldsmhevvenllnycfqtfldktmsiefpemlaeiitnqipkysngnikkllfhq >7prw_AB:Nuclear_receptor_ligand-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=THE GLUCOCORTICOID RECEPTOR IN COMPLEX WITH VELSECORAT, A PGC1A COACTIVATOR FRAGMENT AND SGK 23BP organism=Homo sapiens DNA sequence DT(C1):DA(D23) DC(C2):DG(D22) DG(C3):DC(D21) DA(C4):DT(D20) DC(C5):DG(D19) DG(C6):DC(D18) DG(C7):DC(D17) DA(C8):DT(D16) DC(C9):DG(D15) DA(C10):DT(D14) DA(C11):DT(D13) DA(C12):DT(D12) DA(C13):DT(D11) DT(C14):DA(D10) DG(C15):DC(D9) DT(C16):DA(D8) DT(C17):DA(D7) DC(C18):DG(D6) DT(C19):DA(D5) DG(C20):DC(D4) DT(C21):DA(D3) DA(C22):DT(D2) DC(C23):DG(D1) chainA ( 28) LYS442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 ( 29) VAL443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 ( 33) ARG447 0 0 0 0 0 0 0 0 0 0 0 0 0 14 13 1 0 0 0 0 0 0 0 chainB ( 25) LYS442 0 0 0 0 0 7 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG447 0 0 0 0 0 0 0 1 13 16 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gpppklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlpqltptlvslleviepevlyagydssvpdstwrimttlnmlggrqmiaavkwakaipgfrnlhlddqmtllqyswmslmafalgwrsyrqssanllcfapdliineqrmtlpdmydqckhmlyvsselhrlqvsyeeylcmktllllssvpkdglksqelfdeirmtyikelgkaivkregnssqnwqrfyqltklldsmhevvenllnycfqtfldktmsiefpemlaeiitnqipkysngnikkllfhqk/pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlpqltptlvslleviepevlyagydssvpdstwrimttlnmlggrqmiaavkwakaipgfrnlhlddqmtllqyswmslmafalgwrsyrqssanllcfapdliineqrmtlpdmydqckhmlyvsselhrlqvsyeeylcmktllllssvpkdglksqelfdeirmtyikelgkaivkregnssqnwqrfyqltklldsmhevvenllnycfqtfldktmsiefpemlaeiitnqipkysngnikkllfhqk >7prw_B:Nuclear_receptor_ligand-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=THE GLUCOCORTICOID RECEPTOR IN COMPLEX WITH VELSECORAT, A PGC1A COACTIVATOR FRAGMENT AND SGK 23BP organism=Homo sapiens DNA sequence DT(C1):DA(D23) DC(C2):DG(D22) DG(C3):DC(D21) DA(C4):DT(D20) DC(C5):DG(D19) DG(C6):DC(D18) DG(C7):DC(D17) DA(C8):DT(D16) DC(C9):DG(D15) DA(C10):DT(D14) DA(C11):DT(D13) DA(C12):DT(D12) DA(C13):DT(D11) DT(C14):DA(D10) DG(C15):DC(D9) DT(C16):DA(D8) DT(C17):DA(D7) DC(C18):DG(D6) DT(C19):DA(D5) DG(C20):DC(D4) DT(C21):DA(D3) DA(C22):DT(D2) DC(C23):DG(D1) chainB ( 25) LYS442 0 0 0 0 0 7 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) VAL443 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG447 0 0 0 0 0 0 0 1 13 16 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlpqltptlvslleviepevlyagydssvpdstwrimttlnmlggrqmiaavkwakaipgfrnlhlddqmtllqyswmslmafalgwrsyrqssanllcfapdliineqrmtlpdmydqckhmlyvsselhrlqvsyeeylcmktllllssvpkdglksqelfdeirmtyikelgkaivkregnssqnwqrfyqltklldsmhevvenllnycfqtfldktmsiefpemlaeiitnqipkysngnikkllfhqk >7psx_B:Homeodomain-like; title=STRUCTURE OF HOXB13 BOUND TO HYDROXYMETHYLATED DNA organism=Homo sapiens DNA sequence DT(D1):DA(E18) DT(D2):DA(E17) DG(D3):DC(E16) DT(D4):DA(E15) DG(D5):DC(E14) DT(D6):DA(E13) DT(D7):DA(E12) DT(D8):DA(E11) DT(D9):DA(E10) DA(D10):DT(E9) DT(D11):DA(E8) DG(D12):DT(E6) DA(D13):DC(E5) DG(D14):DC(E4) DG(D15):DA(E3) DT(D16):DG(E2) DC(D17):DG(E1) chainB ( 3) ARG220 0 0 0 0 0 0 8 9 5 0 0 0 0 0 0 0 0 ( 45) ILE262 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 ( 48) GLN265 0 0 0 0 0 0 0 0 0 0 1 5 5 0 0 0 0 ( 49) ASN266 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 ( 56) LYS273 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence kkRipyskgqlrelereyaankfitkdkrrkisaatslserqitIwfQNrrvkekKvlak >7pu7_A:PHP_domain-like; title=DNA POLYMERASE FROM M. TUBERCULOSIS organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DA(P101):DT(T22) DG(P102):DC(T21) DT(P103):DA(T20) DC(P104):DG(T19) DC(P105):DG(T18) DT(P106):DA(T17) DT(P107):DA(T16) DC(P108):DG(T15) DG(P109):DC(T14) DT(P110):DA(T13) DC(P111):DG(T12) DC(P112):DG(T11) DT(P113):DA(T10) DT(P114):DA(T9) chainA (376) ARG382 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (538) ALA544 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence gssfvhlhnhteysmldgaakitpmlaeverlgmpavgmtdhgnmfgasefynsatkagikpiigveayiapgsrfdtrrilwgdpsqkaddvsgsgsythltmmaenatglrnlfklsshasfegqlskwsrmdaeliaehaegiiittgcpsgevqtrlrlgqdrealeaaakwreivgpdnyflelmdhgltierrvrdglleigralnipplatndchyvtrdaahnheallcvqtgktlsdpnrfkfdgdgyylksaaemrqiwddevpgacdstlliaervqsyadvwtprdrmpvfpvpdghdqaswlrhevdaglrrrfpagppdgyreraayeidvicskgfpsyflivadlisyarsagirvgpgRgsaagslvayalgitdidpiphgllferflnpertsmpdididfddrrrgemvryaadkwghdrvaqvitfgtiktkaalkdsarihygqpgfaiadritkalppaimakdiplsgitdpsherykeaaevrglietdpdvrtiyqtargleglirnagvhAcavimsseplteaiplwkrpqdgaiitgwdypaceaigllkmdflglrnltiigdaidnvranrgidldlesvplddkatyellgrgdtlgvfQldggpmrdllrrmqptgfedvvavialyrpgpmgmnahndyadrknnrqaikpihpeleeplreilaetyglivyqeqimriaqkvasyslaradilrkamgkkkrevlekefegfsdgmqangfspaaikalwdtilpfadyafnkshaagygmvsywtaylkanypaeymaglltsvgddkdkaavyladcrklgitvlppdvnesglnfasvgqdiryglgavrnvganvvgsllqtrndkgkftdfsdylnkidisacnkkvteslikagafdslgharkglflvhsdavdsvlgtkkftikvpddewedkhklaleremlglyvsghplngvahllaaqvdtaipaildgdvpndaqvrvggilasvnrrvnkngmpwasaqledltggievmffphtyssygadivddavvlvnakvavrddrialiandlt >7py0_CDG: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSG (NUSG-EC IN MORE-SWIVELED CONFORMATION) organism=ESCHERICHIA COLI DNA sequence DC(T1):DG(N39) DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DG(T16):DC(N24) DA(T17):DT(N23) DC(T18):DT(N22) DG(T19):DC(N21) DC(T20):DT(N20) DG(T21):DA(N19) DC(T22):DG(N18) DC(T23):DC(N13) DG(T24):DC(N12) DC(T25):DT(N11) DG(T26):DG(N10) DG(T27):DC(N9) DG(T28):DA(N8) DA(T29):DT(N7) DC(T30):DG(N6) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 54 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 (304) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 (450) GLN465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 15) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 90) MET90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgSWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRRvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgSnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdQmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/mseapkkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvMgfiggtsdrpapisdkevdaimnrlqqvgdkpr >7py0_G:N-utilization_substance_G_protein_NusG,_N-terminal_domain; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSG (NUSG-EC IN MORE-SWIVELED CONFORMATION) organism=ESCHERICHIA COLI DNA sequence DG(N6):DC(T30) DT(N7):DA(T29) DA(N8):DG(T28) DC(N9):DG(T27) DG(N10):DG(T26) DT(N11):DC(T25) DC(N12):DG(T24) DC(N13):DC(T23) DG(N18):DC(T22) DA(N19):DG(T21) DT(N20):DC(T20) DC(N21):DG(T19) DT(N22):DC(T18) DT(N23):DA(T17) DC(N24):DG(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DA(N36):DT(T4) DG(N37):DC(T3) DA(N38):DT(T2) DG(N39):DC(T1) chainG ( 15) PHE15 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) MET90 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mseapkkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvMgfiggtsdrpapisdkevdaimnrlqqvgdkpr >7py1_CDG: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSG (THE CONSENSUS NUSG-EC) organism=ESCHERICHIA COLI DNA sequence DG(N6):DC(T30) DT(N7):DA(T29) DA(N8):DG(T28) DC(N9):DG(T27) DG(N10):DG(T26) DT(N11):DC(T25) DC(N12):DG(T24) DC(N13):DC(T23) DG(N18):DC(T22) DA(N19):DG(T21) DT(N20):DC(T20) DC(N21):DG(T19) DT(N22):DC(T18) DT(N23):DA(T17) DC(N24):DG(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DA(N36):DT(T4) DG(N37):DC(T3) DA(N38):DT(T2) DG(N39):DC(T1) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 22 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (255) ARG270 0 0 0 6 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) SER319 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 15) PHE15 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgSnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/mseapkkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkpr >7py1_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSG (THE CONSENSUS NUSG-EC) organism=ESCHERICHIA COLI DNA sequence DC(T1):DG(N39) DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DG(T16):DC(N24) DA(T17):DT(N23) DC(T18):DT(N22) DG(T19):DC(N21) DC(T20):DT(N20) DG(T21):DA(N19) DC(T22):DG(N18) DC(T23):DC(N13) DG(T24):DC(N12) DC(T25):DT(N11) DG(T26):DG(N10) DG(T27):DC(N9) DG(T28):DA(N8) DA(T29):DT(N7) DC(T30):DG(N6) chainD (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 3 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 (304) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgSnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7py3_CD: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSA (THE CONSENSUS NUSA-EC) organism=ESCHERICHIA COLI DNA sequence DC(N9):DG(T28) DG(N10):DG(T27) DT(N11):DG(T26) DC(N12):DC(T25) DC(N13):DG(T24) DC(N17):DC(T23) DG(N18):DC(T22) DA(N19):DG(T21) DT(N20):DC(T20) DC(N21):DG(T19) DT(N22):DC(T18) DT(N23):DA(T17) DC(N24):DG(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DA(N36):DT(T4) DG(N37):DC(T3) DA(N38):DT(T2) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) PHE156 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) ASP158 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ILE177 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 1 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 26) PRO41 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) LEU255 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvFfDsdkgkthssgkvlynaRiIpyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkPetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >7py3_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSA (THE CONSENSUS NUSA-EC) organism=ESCHERICHIA COLI DNA sequence DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DG(T16):DC(N24) DA(T17):DT(N23) DC(T18):DT(N22) DG(T19):DC(N21) DC(T20):DT(N20) DG(T21):DA(N19) DC(T22):DG(N18) DC(T23):DC(N17) DG(T24):DC(N13) DC(T25):DC(N12) DG(T26):DT(N11) DG(T27):DG(N10) DG(T28):DC(N9) chainD ( 26) PRO41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkPetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >7py5_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSA AND NUSG (THE CONSENSUS NUSA-NUSG-EC) organism=? DNA sequence DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DG(T16):DC(N24) DA(T17):DT(N23) DC(T18):DT(N22) DG(T19):DC(N21) DC(T20):DT(N20) DG(T21):DA(N19) DC(T22):DG(N18) DC(T23):DC(N13) DG(T24):DC(N12) DC(T25):DT(N11) DG(T26):DG(N10) DG(T27):DC(N9) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (176) ILE177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 (393) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 70 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiIpyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >7py5_CDG: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSA AND NUSG (THE CONSENSUS NUSA-NUSG-EC) organism=ESCHERICHIA COLI DNA sequence DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DG(T16):DC(N24) DA(T17):DT(N23) DC(T18):DT(N22) DG(T19):DC(N21) DC(T20):DT(N20) DG(T21):DA(N19) DC(T22):DG(N18) DC(T23):DC(N13) DG(T24):DC(N12) DC(T25):DT(N11) DG(T26):DG(N10) DG(T27):DC(N9) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (176) ILE177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 (393) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 70 0 0 0 0 0 0 0 0 0 0 0 chainD (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (450) GLN465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 chainG ( 15) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 90) MET90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiIpyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdQmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/mseapkkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvMgfiggtsdrpapisdkevdaimnrlqqvgdkpr >7py6_CDG: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSA AND NUSG (NUSA AND NUSG ELONGATION COMPLEX IN LESS-SWIVELED CONFORMATION) organism=ESCHERICHIA COLI DNA sequence DC(N9):DG(T27) DG(N10):DG(T26) DT(N11):DC(T25) DC(N12):DG(T24) DC(N13):DC(T23) DG(N18):DC(T22) DA(N19):DG(T21) DT(N20):DC(T20) DC(N21):DG(T19) DT(N22):DC(T18) DT(N23):DA(T17) DC(N24):DG(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DA(N36):DT(T4) DG(N37):DC(T3) DA(N38):DT(T2) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 23 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (197) THR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (299) ARG314 0 0 0 0 0 3 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) SER319 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 90) MET90 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgSnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/mseapkkrwyvvqafsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvMgfiggtsdrpapisdkevdaimnrlqqvgdkpr >7py6_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSA AND NUSG (NUSA AND NUSG ELONGATION COMPLEX IN LESS-SWIVELED CONFORMATION) organism=ESCHERICHIA COLI DNA sequence DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DG(T16):DC(N24) DA(T17):DT(N23) DC(T18):DT(N22) DG(T19):DC(N21) DC(T20):DT(N20) DG(T21):DA(N19) DC(T22):DG(N18) DC(T23):DC(N13) DG(T24):DC(N12) DC(T25):DT(N11) DG(T26):DG(N10) DG(T27):DC(N9) chainD (197) THR212 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 3 0 0 0 0 0 (304) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgSnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7py7_CDG: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSA AND NUSG (NUSA AND NUSG ELONGATION COMPLEX IN MORE-SWIVELED CONFORMATION) organism=ESCHERICHIA COLI DNA sequence DC(T1):DG(N39) DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DG(T16):DC(N24) DA(T17):DT(N23) DC(T18):DT(N22) DG(T19):DC(N21) DC(T20):DT(N20) DG(T21):DA(N19) DC(T22):DG(N18) DC(T23):DC(N13) DG(T24):DC(N12) DC(T25):DT(N11) DG(T26):DG(N10) DG(T27):DC(N9) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 12 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72 0 0 0 0 0 0 0 0 0 0 0 chainD (197) THR212 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (252) ASP267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 16 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (450) GLN465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainG ( 90) MET90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlnDlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdQmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/mseapkkrwyvvqafsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvMgfiggtsdrpapisdkevdaimnrlqqvgdkpr >7py7_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSA AND NUSG (NUSA AND NUSG ELONGATION COMPLEX IN MORE-SWIVELED CONFORMATION) organism=ESCHERICHIA COLI DNA sequence DC(T1):DG(N39) DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DG(T16):DC(N24) DA(T17):DT(N23) DC(T18):DT(N22) DG(T19):DC(N21) DC(T20):DT(N20) DG(T21):DA(N19) DC(T22):DG(N18) DC(T23):DC(N13) DG(T24):DC(N12) DC(T25):DT(N11) DG(T26):DG(N10) DG(T27):DC(N9) chainD (197) THR212 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (252) ASP267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 16 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (450) GLN465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggRfatsdlnDlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdQmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7py8_CDG: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSG (NUSG-EC IN LESS-SWIVELED CONFORMATION) organism=ESCHERICHIA COLI DNA sequence DG(N6):DC(T30) DT(N7):DA(T29) DA(N8):DG(T28) DC(N9):DG(T27) DG(N10):DG(T26) DT(N11):DC(T25) DC(N12):DG(T24) DC(N13):DC(T23) DG(N18):DC(T22) DA(N19):DG(T21) DT(N20):DC(T20) DC(N21):DG(T19) DT(N22):DC(T18) DT(N23):DA(T17) DC(N24):DG(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DA(N36):DT(T4) DG(N37):DC(T3) DA(N38):DT(T2) DG(N39):DC(T1) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG470 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (252) ASP267 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 12 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 15) PHE15 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG88 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlnDlyRRvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/mseapkkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvpRvmgfiggtsdrpapisdkevdaimnrlqqvgdkpr >7py8_G:N-utilization_substance_G_protein_NusG,_N-terminal_domain; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSG (NUSG-EC IN LESS-SWIVELED CONFORMATION) organism=ESCHERICHIA COLI DNA sequence DC(T1):DG(N39) DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DG(T16):DC(N24) DA(T17):DT(N23) DC(T18):DT(N22) DG(T19):DC(N21) DC(T20):DT(N20) DG(T21):DA(N19) DC(T22):DG(N18) DC(T23):DC(N13) DG(T24):DC(N12) DC(T25):DT(N11) DG(T26):DG(N10) DG(T27):DC(N9) DG(T28):DA(N8) DA(T29):DT(N7) DC(T30):DG(N6) chainG ( 15) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 ( 88) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence mseapkkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvpRvmgfiggtsdrpapisdkevdaimnrlqqvgdkpr >7pyj_CD: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSA (NUSA ELONGATION COMPLEX IN LESS-SWIVELED CONFORMATION) organism=ESCHERICHIA COLI DNA sequence DC(N9):DG(T28) DG(N10):DG(T27) DT(N11):DG(T26) DC(N12):DC(T25) DC(N13):DG(T24) DC(N17):DC(T23) DG(N18):DC(T22) DA(N19):DG(T21) DT(N20):DC(T20) DC(N21):DG(T19) DT(N22):DC(T18) DT(N23):DA(T17) DC(N24):DG(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DA(N36):DT(T4) DG(N37):DC(T3) DA(N38):DT(T2) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ILE177 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 23 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (255) ARG270 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) GLN465 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariIpyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdQmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >7pyj_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSA (NUSA ELONGATION COMPLEX IN LESS-SWIVELED CONFORMATION) organism=ESCHERICHIA COLI DNA sequence DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DG(T16):DC(N24) DA(T17):DT(N23) DC(T18):DT(N22) DG(T19):DC(N21) DC(T20):DT(N20) DG(T21):DA(N19) DC(T22):DG(N18) DC(T23):DC(N17) DG(T24):DC(N13) DC(T25):DC(N12) DG(T26):DT(N11) DG(T27):DG(N10) DG(T28):DC(N9) chainD (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (450) GLN465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdQmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >7pyk_CD: title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSA (NUSA ELONGATION COMPLEX IN MORE-SWIVELED CONFORMATION) organism=ESCHERICHIA COLI DNA sequence DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DG(T16):DC(N24) DA(T17):DT(N23) DC(T18):DT(N22) DG(T19):DC(N21) DC(T20):DT(N20) DG(T21):DA(N19) DC(T22):DG(N18) DC(T23):DC(N17) DG(T24):DC(N13) DC(T25):DC(N12) DG(T26):DT(N11) DG(T27):DG(N10) DG(T28):DC(N9) chainC (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 12 0 0 0 0 0 0 0 0 0 0 (176) ILE177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 3 0 0 0 0 0 0 0 0 0 (184) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52 0 0 0 0 0 0 0 0 0 0 0 0 chainD (252) ASP267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (305) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiIpyrgsWlDfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlnDlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >7pyk_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI RNA POLYMERASE ELONGATION COMPLEX BOUND TO NUSA (NUSA ELONGATION COMPLEX IN MORE-SWIVELED CONFORMATION) organism=? DNA sequence DC(N9):DG(T28) DG(N10):DG(T27) DT(N11):DG(T26) DC(N12):DC(T25) DC(N13):DG(T24) DC(N17):DC(T23) DG(N18):DC(T22) DA(N19):DG(T21) DT(N20):DC(T20) DC(N21):DG(T19) DT(N22):DC(T18) DT(N23):DA(T17) DC(N24):DG(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DA(N36):DT(T4) DG(N37):DC(T3) DA(N38):DT(T2) chainD (252) ASP267 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) ASN320 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlnDlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >7pza_B:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE CLR-CAMP-DNA COMPLEX organism=Sinorhizobium meliloti 1021 DNA sequence DG(E5):DC(F14) DT(E6):DA(F13) DA(E7):DT(F12) DA(E8):DT(F11) DC(E9):DG(F10) DA(E10):DT(F9) DT(E11):DA(F8) DT(E12):DA(F7) DA(E13):DT(F6) chainB (189) SER194 1 2 0 0 0 0 0 0 0 (190) ARG195 0 0 0 2 5 10 0 0 0 (191) PRO196 0 3 3 5 0 0 0 0 0 (192) LYS197 14 6 0 0 0 0 0 0 0 (194) ASN199 0 0 0 3 3 0 0 0 0 prot.sequence rssafwrsfpifeefdsetlcelsgiasyrkwsagtvifqrgdqgdymivvvsgriklslftpqgrelmlrqheagalfgemalldgqprsadatavtaaegyvigkkdflalitqrpktaeavirflcaqlrdttdrletialydlnarvarfflatlrqihgsempqsanlrltlsqtdiasilgaSRPKvNrailsleesgaikradgiiccnvgrllsiadp >7pzb_A:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF THE CLR-CAMP-DNA COMPLEX organism=Sinorhizobium meliloti 1021 DNA sequence DG(C5):DC(D14) DT(C6):DA(D13) DA(C7):DT(D12) DA(C8):DT(D11) DC(C9):DG(D10) DA(C10):DT(D9) DT(C11):DA(D8) DT(C12):DA(D7) DA(C13):DT(D6) DC(C14):DG(D5) DT(C15):DA(D4) DC(C16):DG(D3) DG(C17):DC(D2) DC(C18):DG(D1) chainA (189) SER194 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (190) ARG195 0 0 0 2 9 11 0 0 0 0 0 0 0 0 (191) PRO196 0 0 2 6 0 0 0 0 0 0 0 0 0 0 (192) LYS197 8 1 0 0 0 0 0 0 0 0 0 0 0 0 (194) ASN199 0 0 0 1 3 0 0 0 0 0 0 0 0 0 prot.sequence rssafwrsfpifeefdsetlcelsgiasyrkwsagtvifqrgdqgdymivvvsgriklslftpqgrelmlrqheagalfgemalldgqprsadatavtaaegyvigkkdflalitqrpktaeavirflcaqlrdttdrletialydlnarvarfflatlrqihgsempqsanlrltlsqtdiasilgaSRPKvNrailsleesgaikradgiiccnvgrllsiadpe >7q0j_CD: title=RNA POLYMERASE ELONGATION COMPLEX IN MORE-SWIVELED CONFORMATION organism=ESCHERICHIA COLI DNA sequence DC(T1):DG(N39) DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DG(T16):DC(N24) chainC (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 chainD prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteYEkdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7q0k_CD: title=RNA POLYMERASE ELONGATION COMPLEX IN LESS-SWIVELED CONFORMATION organism=ESCHERICHIA COLI DNA sequence DG(N6):DG(T24) DT(N7):DC(T23) DA(N8):DC(T22) DC(N9):DG(T21) DG(N10):DC(T20) DT(N11):DG(T19) DC(N12):DC(T18) DC(N13):DA(T17) DC(N24):DG(T16) DG(N25):DC(T15) DG(N26):DC(T14) DA(N27):DT(T13) DA(N28):DT(T12) DG(N29):DC(T11) DA(N30):DT(T10) DG(N31):DC(T9) DA(N32):DT(T8) DT(N33):DA(T7) DT(N34):DA(T6) DC(N35):DG(T5) DA(N36):DT(T4) DG(N37):DC(T3) DA(N38):DT(T2) DG(N39):DC(T1) chainC (541) ARG542 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (252) ASP267 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) GLN465 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlnDlyrRvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdQmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7q0k_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE ELONGATION COMPLEX IN LESS-SWIVELED CONFORMATION organism=ESCHERICHIA COLI DNA sequence DC(T1):DG(N39) DT(T2):DA(N38) DC(T3):DG(N37) DT(T4):DA(N36) DG(T5):DC(N35) DA(T6):DT(N34) DA(T7):DT(N33) DT(T8):DA(N32) DC(T9):DG(N31) DT(T10):DA(N30) DC(T11):DG(N29) DT(T12):DA(N28) DT(T13):DA(N27) DC(T14):DG(N26) DC(T15):DG(N25) DG(T16):DC(N24) DA(T17):DC(N13) DC(T18):DC(N12) DG(T19):DT(N11) DC(T20):DG(N10) DG(T21):DC(N9) DC(T22):DA(N8) DC(T23):DT(N7) DG(T24):DG(N6) chainD (252) ASP267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (450) GLN465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlnDlyrRvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdQmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7q0n_A: title=ARBITRIUM RECEPTOR FROM KATMIRA PHAGE organism=BACILLACEAE DNA sequence DG(C1):DC(D45) DG(C2):DC(D44) DC(C3):DG(D43) DC(C4):DG(D42) DA(C5):DT(D41) DT(C6):DA(D40) DC(C7):DG(D39) DA(C8):DT(D38) DC(C9):DG(D37) DT(C10):DA(D36) DA(C11):DT(D35) DG(C12):DC(D34) DA(C13):DT(D33) DT(C14):DA(D32) DG(C15):DC(D31) DT(C16):DA(D30) DT(C17):DA(D29) DA(C18):DT(D28) DT(C19):DA(D27) DA(C20):DT(D26) DA(C21):DT(D25) DA(C22):DT(D24) DA(C23):DT(D23) DA(C24):DT(D22) DC(C25):DG(D21) DT(C26):DA(D20) DT(C27):DA(D19) DA(C28):DT(D18) DA(C29):DT(D17) DT(C30):DA(D16) DA(C31):DT(D15) DT(C32):DA(D14) DT(C33):DA(D13) DT(C34):DA(D12) DA(C35):DT(D11) DA(C36):DT(D10) DG(C37):DC(D9) DT(C38):DA(D8) DG(C39):DC(D7) DA(C40):DT(D6) DT(C41):DA(D5) DC(C42):DG(D4) DA(C43):DT(D3) DA(C44):DT(D2) DC(C45):DG(D1) chainA ( 30) ASN30 0 0 0 0 0 0 0 1 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN32 0 0 0 0 0 0 8 8 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) PRO33 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) TYR35 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASP36 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS43 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meliriamkkdlendnslmnkwatvaglkNpNPlYDflnhdgKtfnefssivnivksqypdreyelmkdyclnldvktkaarsaleyadanmffeiedalidsmiscsnmkskeygkvykihrelskgeidvfeasanigkqriktaemnifskmllmydclnkgnfapmmllfqqidlseikenrylknsfetrinvllsniylnennlelcreyaqkaisstdtqrflvfsyltigtsyifsdfnlskqnyliglkfakgnpgfeeffkrnlsflnnfwnkenewinydsdavtdmqevifelinhkelskalqllnkleerdqnenelgfhyylkglitnekeaffksveyfkasqdklsikmpliqlekmgenprllkiitm >7q0n_AB: title=ARBITRIUM RECEPTOR FROM KATMIRA PHAGE organism=BACILLACEAE DNA sequence DG(D1):DC(C45) DT(D2):DA(C44) DT(D3):DA(C43) DG(D4):DC(C42) DA(D5):DT(C41) DT(D6):DA(C40) DC(D7):DG(C39) DA(D8):DT(C38) DC(D9):DG(C37) DT(D10):DA(C36) DT(D11):DA(C35) DA(D12):DT(C34) DA(D13):DT(C33) DA(D14):DT(C32) DT(D15):DA(C31) DA(D16):DT(C30) DT(D17):DA(C29) DT(D18):DA(C28) DA(D19):DT(C27) DA(D20):DT(C26) DG(D21):DC(C25) DT(D22):DA(C24) DT(D23):DA(C23) DT(D24):DA(C22) DT(D25):DA(C21) DT(D26):DA(C20) DA(D27):DT(C19) DT(D28):DA(C18) DA(D29):DT(C17) DA(D30):DT(C16) DC(D31):DG(C15) DA(D32):DT(C14) DT(D33):DA(C13) DC(D34):DG(C12) DT(D35):DA(C11) DA(D36):DT(C10) DG(D37):DC(C9) DT(D38):DA(C8) DG(D39):DC(C7) DA(D40):DT(C6) DT(D41):DA(C5) DG(D42):DC(C4) DG(D43):DC(C3) DC(D44):DG(C2) DC(D45):DG(C1) chainA ( 30) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 1 0 0 0 0 0 0 0 ( 32) ASN32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 8 8 0 0 0 0 0 0 ( 33) PRO33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 35) TYR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 ( 36) ASP36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 ( 43) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainB ( 30) ASN30 0 0 0 0 0 0 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN32 0 0 0 0 0 0 7 8 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) PRO33 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) TYR35 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASP36 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) MET110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meliriamkkdlendnslmnkwatvaglkNpNPlYDflnhdgKtfnefssivnivksqypdreyelmkdyclnldvktkaarsaleyadanmffeiedalidsmiscsnmkskeygkvykihrelskgeidvfeasanigkqriktaemnifskmllmydclnkgnfapmmllfqqidlseikenrylknsfetrinvllsniylnennlelcreyaqkaisstdtqrflvfsyltigtsyifsdfnlskqnyliglkfakgnpgfeeffkrnlsflnnfwnkenewinydsdavtdmqevifelinhkelskalqllnkleerdqnenelgfhyylkglitnekeaffksveyfkasqdklsikmpliqlekmgenprllkiitm/meliriamkkdlendnslmnkwatvaglkNpNPlYDflnhdgktfnefssivnivksqypdreyelmkdyclnldvktkaarsaleyadanmffeiedalidsmiscsnMkskeygkvykihrelskgeidvfeasanigkqriktaemnifskmllmydclnkgnfapmmllfqqidlseikenrylknsfetrinvllsniylnennlelcreyaqkaisstdtqrflvfsyltigtsyifsdfnlskqnyliglkfakgnpgfeeffkrnlsflnnfwnkenewinydsdavtdmqevifelinhkelskalqllnkleerdqnenelgfhyylkglitnekeaffksveyfkasqdklsikmpliqlekmgenprllkiitm >7q2x_ABD:P-loop_containing_nucleoside_triphosphate_hydrolases;ARM_repeat; title=CRYO-EM STRUCTURE OF CLAMPED S.CEREVISIAE CONDENSIN-DNA COMPLEX (FORM I) organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DT(G1):DA(F36) DT(G2):DA(F35) DT(G3):DA(F34) DT(G4):DA(F33) DT(G5):DA(F32) DT(G6):DA(F31) DT(G7):DA(F30) DT(G8):DA(F29) DT(G9):DA(F28) DT(G10):DA(F27) DT(G11):DA(F26) DT(G12):DA(F25) DT(G13):DA(F24) DT(G14):DA(F23) DT(G15):DA(F22) DT(G16):DA(F21) DT(G17):DA(F20) DT(G18):DA(F19) DT(G19):DA(F18) DT(G20):DA(F17) DT(G21):DA(F16) DT(G22):DA(F15) DT(G23):DA(F14) DT(G24):DA(F13) DT(G25):DA(F12) DT(G26):DA(F11) DT(G27):DA(F10) DT(G28):DA(F9) DT(G29):DA(F8) DT(G30):DA(F7) DT(G31):DA(F6) DT(G32):DA(F5) DT(G33):DA(F4) DT(G34):DA(F3) DT(G35):DA(F2) DT(G36):DA(F1) chainA chainB ( 74) ARG205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 chainD prot.sequence mkveeliidgfksyatrtvitdwdpqfnaitglngsgksnildaicfvlgiasmstvrasslqdliykrgqagvtkasvtivfdntdksnspigftnspqisvtrqvvlggtskylinghrapqqsvlqlfqsvqlninnpnflimqgkitkvlnmkpseilslieeaagtkmfedrrekaertmskketklqenrtllteeiepkleklrnekrmflefqstqtdleskqlnekfqelrkkvnpnimnmienvekkeaalktmiktiekdkmkiqetisklneykretlvktwekvtldfgnifadllpnsfaklvpcegkdvtqglevkvklgniwkeslielsggqrslialslimallqfrpapmyildevdaaldlshtqnighliktrfkgsqfivvslkegmfananrvfrtrfqdgtsvvsim/qlspvknsrvelqkiydrhqsrlfinelvlenfksyagkqvvgpfhtsfsavvgpngsgksnvidsmlfvfgfRankmrqdrlsdlihkseafpslqscsvavhfqyvidessgtsrideekpgliitrkafknnsskyyinekessytevtkllknegidldhkrflilqgeveniaqmkpkaekesddglleylediigtanykplieermgqienlvqkrdevkeqlgilkkkrfdefmagfniismtlkemyqmitmggnaelelvdsldpfsegvtfsvmppkkswrnitnlsggektlsslalvfalhkykptplyvmdeidaaldfrnvsivanyikertknaqfivislrnnmfelaqqlvgvykrdnrtksttiknidi/fslseyltkfqttddpsrelnviidqlavspeqipdslealidlchdfphltpklqtqlsylissslsnlskdIkanlglipqwkrhleeygyliqvlltflqdelhkvssnvelfkrdcnqmenllesitklleinlskifqttpekdlfiglftrplfvlleiepvtkvsslkmfiqrilamcvknhgqsssiqsslmtnltyflhlsvfnaellkllndeynypqltedilkeistrvfnakdttgpkaisnfliklselspgimlrqmnlvitllnnssitlrcsvveacgnivaelaqdpqtmehykqqiavlielleerfqdsnpyvrtkaiqgcskicdlsskfnkskakftslavrslqdrsslvrrnsvkllsklllkhpfkaihgsqlrlseweeylkgsesqlnstsvlmklklmivyykdaisfikeihksielisnllfsknrnevlesmdflvladafdielsefgikkmlhlvwmksisvhliecykqlfltapdscnmqekaahiaknlinlsigasiadlasleqllgmmyeqklidqhvinilwaiynsasgfskeqihgsiiilgmlsladneialkglesllniglgavglkdltlcrysclalermvpkainqeledvavkklyaiiinytkdneyypmceqalsalftisskpdilatdlirektmmtfgkpssrvvslsqllfivgqvaiktlvylekceaefkkrkieatneddftdaiqfvkenellfgeksilgkfcpiveeivsnssrfsdpmlqrtatlcleklmclsskycekslpllitvmekspdptirsnavlglgdmavcfnnlvdentdylyrrlhdenlmvqrtclmtvtflilagqvkvkgqlgemakcldnpdqgisdmcrlfftelaskdnaiyngfidifsnlssddllgkesfkkiikflltfidkerhqkqlneklvgrlrkcetqkqwddiafvlnnlpyknedvtalleqg >7q2y_AD:P-loop_containing_nucleoside_triphosphate_hydrolases;ARM_repeat; title=CRYO-EM STRUCTURE OF CLAMPED S.CEREVISIAE CONDENSIN-DNA COMPLEX (FORM II) organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DT(G1):DA(F28) DT(G2):DA(F27) DT(G3):DA(F26) DT(G4):DA(F25) DT(G5):DA(F24) DT(G6):DA(F23) DT(G7):DA(F22) DT(G8):DA(F21) DT(G9):DA(F20) DT(G10):DA(F19) DT(G11):DA(F18) DT(G12):DA(F17) DT(G13):DA(F16) DT(G14):DA(F15) DT(G15):DA(F14) DT(G16):DA(F13) DT(G17):DA(F12) DT(G18):DA(F11) DT(G19):DA(F10) DT(G20):DA(F9) DT(G21):DA(F8) DT(G22):DA(F7) DT(G23):DA(F6) DT(G24):DA(F5) DT(G25):DA(F4) DT(G26):DA(F3) DT(G27):DA(F2) DT(G28):DA(F1) chainA chainD (323) TYR373 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkveeliidgfksyatrtvitdwdpqfnaitglngsgksnildaicfvlgiasmstvrasslqdliykrgqagvtkasvtivfdntdksnspigftnspqisvtrqvvlggtskylinghrapqqsvlqlfqsvqlninnpnflimqgkitkvlnmkpseilslieeaagtkmfedrrekaertmskketklqenrtllteeiepkleklrnekrmflefqstqtdleskqlnekfqelrkkvnpnimnmienvekkeaalktmiktiekdkmkiqetisklneykretlvktwekvtldfgnifadllpnsfaklvpcegkdvtqglevkvklgniwkeslielsggqrslialslimallqfrpapmyildevdaaldlshtqnighliktrfkgsqfivvslkegmfananrvfrtrfqdgtsvvsim/lseyltkfqttdpsrelnviidqladslealidlchdfphltpklqtqlsylissslsnlskdikanlgglipqwkrhleeygyliqvlltflqdelhkvssnvelfkrdcnqmenllesitklleinlskifqttpekdlfiglftrplfvlleiepvtkvsslkmfiqrilamcvknhgqsssiqsslmtnltyflhlsvfnaellkllndeynypqltedilkeistrvfnakdttgpkaisnfliklselspgimlrqmnlvitllnnssitlrcsvveacgnivaelaqdpqtmehykqqiavlielleerfqdsnpYvrtkaiqgcskicdlsskfnkskakftslavrslqdrsslvrrnsvkllsklllkhpfkaihgsqlrlseweeylkgsesqltsvlmklklmivyykdaisfikeihksielisnllfsknrnevlesmdflvladafdielsefgikkmlhlvwmksisvhliecykqlfltapdscnmqekaahiaknlinlsigasiadlasleqllgmmyeqklidqhvinilwaiynsasgfskeqihgsiiilgmlsladneialkglesllniglgavglkdltlcrysclalermvpinqeledvavkklyaiiinytkdneyypmceqalsalftisskpdilatdlirektmmtfgkssrvvslsqllfivgqvaiktlvylekceaefkkrkieneddftdaiqfvkenellfgeksilgkfcpiveeivsnssrfsdpmlqrtatlcleklmclsskycekslpllitvmekspdptirsnavlglgdmavcfnnlvdentdylyrrlhdenlmvqrtclmtvtflilagqvkvkgqlgemakcldnpdqgisdmcrlfftelaskdnaiyngfidifsnlssddllgkesfkkiikflltfidkerhqkqlneklvgrlrkcetqkqwddiafvlnnlpyknedvtalle >7q2y_D:ARM_repeat; title=CRYO-EM STRUCTURE OF CLAMPED S.CEREVISIAE CONDENSIN-DNA COMPLEX (FORM II) organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DA(F1):DT(G28) DA(F2):DT(G27) DA(F3):DT(G26) DA(F4):DT(G25) DA(F5):DT(G24) DA(F6):DT(G23) DA(F7):DT(G22) DA(F8):DT(G21) DA(F9):DT(G20) DA(F10):DT(G19) DA(F11):DT(G18) DA(F12):DT(G17) DA(F13):DT(G16) DA(F14):DT(G15) DA(F15):DT(G14) DA(F16):DT(G13) DA(F17):DT(G12) DA(F18):DT(G11) DA(F19):DT(G10) DA(F20):DT(G9) DA(F21):DT(G8) DA(F22):DT(G7) DA(F23):DT(G6) DA(F24):DT(G5) DA(F25):DT(G4) DA(F26):DT(G3) DA(F27):DT(G2) DA(F28):DT(G1) chainD (323) TYR373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence lseyltkfqttdpsrelnviidqladslealidlchdfphltpklqtqlsylissslsnlskdikanlgglipqwkrhleeygyliqvlltflqdelhkvssnvelfkrdcnqmenllesitklleinlskifqttpekdlfiglftrplfvlleiepvtkvsslkmfiqrilamcvknhgqsssiqsslmtnltyflhlsvfnaellkllndeynypqltedilkeistrvfnakdttgpkaisnfliklselspgimlrqmnlvitllnnssitlrcsvveacgnivaelaqdpqtmehykqqiavlielleerfqdsnpYvrtkaiqgcskicdlsskfnkskakftslavrslqdrsslvrrnsvkllsklllkhpfkaihgsqlrlseweeylkgsesqltsvlmklklmivyykdaisfikeihksielisnllfsknrnevlesmdflvladafdielsefgikkmlhlvwmksisvhliecykqlfltapdscnmqekaahiaknlinlsigasiadlasleqllgmmyeqklidqhvinilwaiynsasgfskeqihgsiiilgmlsladneialkglesllniglgavglkdltlcrysclalermvpinqeledvavkklyaiiinytkdneyypmceqalsalftisskpdilatdlirektmmtfgkssrvvslsqllfivgqvaiktlvylekceaefkkrkieneddftdaiqfvkenellfgeksilgkfcpiveeivsnssrfsdpmlqrtatlcleklmclsskycekslpllitvmekspdptirsnavlglgdmavcfnnlvdentdylyrrlhdenlmvqrtclmtvtflilagqvkvkgqlgemakcldnpdqgisdmcrlfftelaskdnaiyngfidifsnlssddllgkesfkkiikflltfidkerhqkqlneklvgrlrkcetqkqwddiafvlnnlpyknedvtalle >7q2z_C: title=CRYO-EM STRUCTURE OF S.CEREVISIAE CONDENSIN YCG1-BRN1-DNA COMPLEX organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DT(F1):DA(G23) DT(F2):DA(G22) DT(F3):DA(G21) DT(F4):DA(G20) DT(F5):DA(G19) DT(F6):DA(G18) DT(F7):DA(G17) DT(F8):DA(G16) DT(F9):DA(G15) DT(F10):DA(G14) DT(F12):DA(G13) DT(F13):DA(G12) DT(F14):DA(G10) DT(F15):DA(G9) DT(F16):DA(G8) DT(F17):DA(G7) DT(F18):DA(G6) DT(F19):DA(G5) DT(F20):DA(G4) DT(F21):DA(G3) DT(F22):DA(G2) DT(F23):DA(G1) chainC ( 46) ARG480 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ekdlmayfdenlnrnwrgrehwkvleidffktddsfedkvfaskgRtkidmpiknrkndthyllpddfhfstdritrlfikpgqkmslfs >7q2z_CE:ARM_repeat; title=CRYO-EM STRUCTURE OF S.CEREVISIAE CONDENSIN YCG1-BRN1-DNA COMPLEX organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DA(G1):DT(F23) DA(G2):DT(F22) DA(G3):DT(F21) DA(G4):DT(F20) DA(G5):DT(F19) DA(G6):DT(F18) DA(G7):DT(F17) DA(G8):DT(F16) DA(G9):DT(F15) DA(G10):DT(F14) DA(G12):DT(F13) DA(G13):DT(F12) DA(G14):DT(F10) DA(G15):DT(F9) DA(G16):DT(F8) DA(G17):DT(F7) DA(G18):DT(F6) DA(G19):DT(F5) DA(G20):DT(F4) DA(G21):DT(F3) DA(G22):DT(F2) DA(G23):DT(F1) chainE chainC ( 46) ARG480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 prot.sequence ekdlmayfdenlnrnwrgrehwkvleidffktddsfedkvfaskgRtkidmpiknrkndthyllpddfhfstdritrlfikpgqkmslfs/dintkifnsvaevfqkaqgsyaghrkhiavlkkiqskaveqgyedAfnfwfdklvtkilplkkneiigdrivklvaafiaslerelilakkqnykltndeegifsrfvdqfirhvlrgvespdknvrfrvlqllavimdnigeideslfnllilslnkriydreptvriqavfcltkfqdeeatrtlvasiqndpsaevrraamlnlindnntrpyilerardvnivnrrlvysrilksmgrkcfddiephifdqliewgledrelsvrnackrliahdwlnaldgdliellekldvsrssvcvkaiealfqsrpdilskikfpesiwkdftveiaflfraiylycldnnitemleenfpeasklsehlnhyillryhhfdyntlefiieqlsiaaerydysdevgrrsmltvvrnmlalttlseplikigirvmkslsinekdfvtmaieiindirdddiekqeqeekikeassativlcltrssymlelvntplteniliaslmdtlitpavrntapnirelgvknlglcclldvklaidnmyilgmcvskgnaslkyialqvivdifsvhgntvvdgegkvdsislhkifykvlknnglpecqviaaeglcklfladvftdddlfetlvlsyfspinssnealvqafafcipvycfshpahqqrmsrtaadillrlcvlwddlqssvivdreamlkpniifqqllfwtdprnlvnqtgstkkdtvqltflidvlkiyaqiekkeikkmiitninaiflsseqdystlkelleysddiaendnldnvsknaldklrnnlnslieeiners >7q3o_C:Homeodomain-like; title=STRUCTURE OF CDX1 BOUND TO HYDROXYMETHYLATED DNA organism=Homo sapiens DNA sequence DT(B1):DA(I18) DT(B2):DA(I17) DG(B3):DC(I16) DT(B4):DA(I15) DG(B5):DC(I14) DT(B6):DA(I13) DT(B7):DA(I12) DT(B8):DA(I11) DT(B9):DA(I10) DA(B10):DT(I9) DT(B11):DA(I8) DG(B12):DT(I6) DA(B13):DG(I5) DC(B14):DC(I4) DG(B15):DA(I3) DT(B16):DG(I2) DC(B17):DG(I1) chainC ( 7) TYR189 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 ( 8) ARG190 0 0 0 0 0 0 10 12 6 0 0 0 0 0 0 0 0 ( 49) LYS231 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 50) ILE232 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 ( 53) GLN235 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 ( 54) ASN236 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 prot.sequence trtkdkYRvvytdhqrlelekefhysryitirrkselaanlglterqvKIwfQNrrakerkvn >7q4n_C:Homeodomain-like; title=TRANSCRIPTION FACTOR CDX2 BOUND TO HYDROXYMETHYLATED DNA organism=Homo sapiens DNA sequence DT(B1):DA(E39) DT(B2):DA(E38) DG(B3):DC(E37) DT(B4):DA(E36) DG(B5):DC(E35) DT(B6):DA(E34) DT(B7):DA(E33) DT(B8):DA(E32) DT(B9):DA(E31) DA(B10):DT(E30) DT(B11):DA(E29) DG(B12):DT(E27) DA(B13):DG(E26) DC(B14):DC(E25) DG(B15):DA(E24) DT(B16):DG(E23) DC(B17):DG(E22) chainC ( 1) TYR189 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 ( 2) ARG190 0 0 0 0 0 0 10 10 5 0 0 0 0 0 0 0 0 ( 44) ILE232 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 47) GLN235 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 ( 48) ASN236 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 prot.sequence YRvvytdhqrlelekefhysryitirrkaelaatlglserqvkIwfQNrrakerkinkkklqq >7q94_AB:"Winged_helix"_DNA-binding_domain;Nudix; title=CRYSTAL STRUCTURE OF AGROBACTERIUM TUMEFACIENS NADQ, DNA COMPLEX. organism=Agrobacterium fabrum (strain C58 / ATCC 33970) / Agrobacterium fabrum (strain C58 / ATCC 33970) / Agrobacterium fabrum (strain C58 / ATCC 33970) / Agrobacterium fabrum (strain C58 / ATCC 33970) DNA sequence DA(D2):DT(C31) DG(D3):DT(C30) DA(D4):DT(C28) DC(D5):DG(C27) DA(D6):DT(C26) DT(D7):DA(C25) DA(D8):DT(C24) DT(D9):DA(C23) DT(D10):DA(C22) DC(D11):DG(C21) DT(D12):DA(C20) DC(D13):DG(C19) DA(D14):DT(C18) DT(D15):DA(C17) DT(D16):DA(C16) DG(D17):DC(C15) DT(D18):DA(C14) DG(D19):DC(C13) DA(D20):DT(C12) DG(D21):DC(C11) DC(D22):DG(C10) DA(D23):DT(C9) DT(D24):DA(C8) DA(D25):DT(C7) DT(D26):DA(C6) DG(D27):DC(C5) DT(D28):DA(C4) DC(D29):DG(C3) DA(D30):DT(C2) DA(D31):DT(C1) chainA (225) HIS246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (226) LYS247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (227) GLN248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 19 8 0 0 0 0 0 0 0 0 0 0 (228) ASN249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 (231) ARG252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 4 0 0 0 0 0 0 0 0 0 0 0 0 (252) ARG273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 54 0 0 0 0 0 0 chainB (222) HIS246 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) LYS247 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) GLN248 0 0 0 0 0 0 0 34 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ASN249 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) ARG251 0 0 0 0 0 0 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) ARG252 0 0 0 0 0 0 0 0 0 7 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ARG273 0 0 5 20 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eliavvtaittdeprvmtvregaalpsgpfefghrtlqsglrewiheqthhpvgyleqlytfadrdrnngrtisigylglvrefwhgwyeyfpwedhrqgrpdildsiidklrawadsepdsraqrhlradftfgldgggwneeltlqryellyeaglvgeaqseprinfgrpmfadhrrilatgiarlrakikyrpvvfelmadsftllqlqraiealagltlHKQNfrRlieqqqlveetgdmatetggRpaklfrfrqtvlder/aeliavvtaittdeprvmtvregaalpsgpfefghrtlqsglrewiheqthhpvgyleqlytfadrrtisigylglvreqfwhgwyeyfpwedhrqgrpdildsiidklrawadsepdsraqrhlradftfgldgggwneeltlqryellyeaglvgeaqseprinfgrpmfadhrrilatgiarlrakikyrpvvfelmadsftllqlqraiealagltlHKQNfRRlieqqqlveetgdmatetggRpaklfrfrqtvlder >7q94_B:"Winged_helix"_DNA-binding_domain;Nudix; title=CRYSTAL STRUCTURE OF AGROBACTERIUM TUMEFACIENS NADQ, DNA COMPLEX. organism=Agrobacterium fabrum (strain C58 / ATCC 33970) / Agrobacterium fabrum (strain C58 / ATCC 33970) DNA sequence DA(D2):DT(C31) DG(D3):DT(C30) DA(D4):DT(C28) DC(D5):DG(C27) DA(D6):DT(C26) DT(D7):DA(C25) DA(D8):DT(C24) DT(D9):DA(C23) DT(D10):DA(C22) DC(D11):DG(C21) DT(D12):DA(C20) DC(D13):DG(C19) DA(D14):DT(C18) DT(D15):DA(C17) DT(D16):DA(C16) DG(D17):DC(C15) DT(D18):DA(C14) DG(D19):DC(C13) DA(D20):DT(C12) DG(D21):DC(C11) DC(D22):DG(C10) DA(D23):DT(C9) DT(D24):DA(C8) DA(D25):DT(C7) DT(D26):DA(C6) DG(D27):DC(C5) DT(D28):DA(C4) DC(D29):DG(C3) DA(D30):DT(C2) DA(D31):DT(C1) chainB (222) HIS246 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) LYS247 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) GLN248 0 0 0 0 0 0 0 34 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ASN249 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) ARG251 0 0 0 0 0 0 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) ARG252 0 0 0 0 0 0 0 0 0 7 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ARG273 0 0 5 20 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aeliavvtaittdeprvmtvregaalpsgpfefghrtlqsglrewiheqthhpvgyleqlytfadrrtisigylglvreqfwhgwyeyfpwedhrqgrpdildsiidklrawadsepdsraqrhlradftfgldgggwneeltlqryellyeaglvgeaqseprinfgrpmfadhrrilatgiarlrakikyrpvvfelmadsftllqlqraiealagltlHKQNfRRlieqqqlveetgdmatetggRpaklfrfrqtvlder >7qd4_A: title=CRYO-EM STRUCTURE OF TN4430 TNPA TRANSPOSASE FROM TN3 FAMILY IN COMPLEX WITH 100 BP LONG TRANSPOSON END DNA organism=? DNA sequence DA(B19):DT(C1082) DG(B20):DC(C1081) DA(B21):DT(C1080) DT(B22):DA(C1079) DG(B23):DC(C1078) DC(B24):DG(C1077) DA(B25):DT(C1076) DT(B26):DA(C1075) DC(B27):DG(C1074) DC(B28):DG(C1073) DA(B29):DT(C1072) DT(B30):DA(C1071) DG(B31):DC(C1070) DG(B32):DC(C1069) DG(B33):DC(C1068) DG(B34):DC(C1067) DG(B35):DC(C1066) DT(B36):DA(C1065) DA(B37):DT(C1064) DC(B38):DG(C1063) DC(B39):DG(C1062) DG(B40):DC(C1061) DC(B41):DG(C1060) DC(B42):DG(C1059) DA(B43):DT(C1058) DG(B44):DC(C1057) DC(B45):DG(C1056) DA(B46):DT(C1055) DT(B47):DA(C1054) DT(B48):DA(C1053) DT(B49):DA(C1052) DC(B50):DG(C1051) DG(B51):DC(C1050) DG(B52):DC(C1049) DA(B53):DT(C1048) DA(B54):DT(C1047) DA(B55):DT(C1046) DA(B56):DT(C1045) DA(B57):DT(C1044) DA(B58):DT(C1043) DA(B59):DT(C1042) DC(B60):DG(C1041) DC(B61):DG(C1040) DA(B62):DT(C1039) DC(B63):DG(C1038) DG(B64):DC(C1037) DC(B65):DG(C1036) DT(B66):DA(C1035) DA(B67):DT(C1034) DA(B68):DT(C1033) DG(B69):DC(C1032) DA(B70):DT(C1031) DT(B71):DA(C1030) chainA ( 2) VAL3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 13 0 0 0 ( 96) ARG97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 10 19 0 0 0 0 0 0 0 ( 98) ASN99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 5 0 0 0 0 0 0 0 0 0 (101) TRP102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 8 0 0 0 0 0 0 0 0 0 0 0 (160) TYR161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) GLU261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) TYR263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ARG267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) SER386 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (389) ARG390 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (603) THR623 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (614) TYR634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (615) ARG635 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 20 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (619) ASN639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (825) ARG899 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gVkqllseaqrnelmdlsrltewdlvtfhtfskhdlhlilkhRrgynrlgfalqlvlirypgwslteykdipqyvvayvasqlqippeeflvyakRgNtlWehlgeirteygyqnfsseyketllqflvqqamdnnntlylieitistlrkmkvilpamYviedivweakqqadqkvysilhdglvqeqkdqldalllptingksplawlkdvpaqpspesflkvidrlqfvqkigltidttkintnrlrqlarlgskyEpYafrRfnevkrysmlvsflleitqdlidyaieihdrlmmnlqtkgkkeqdeiqqangkklnekilqfitvcgtlieaketgkdafaaldevmswnemvesveeakqlsrplnydyldllntrySyvrRyaptllrslhfratksgepvlqaldtihelnetgkrkvphgaplhfvsnrwqkhvydddgninrhyyelaaltelrnhirsgdifvsgsrhhkafddylipydewnevsnipngltaplkaedyitdrinrlnehlewlsrldrgtpeeakafskllhsmlprikltdllievaswtgfhdqfihastnqspdqeeqnivlatlmamgtniglTkmaeatpgisYRqmaNasqwrmyddamvraqsilvnfqkeqklssywgsdgmrlsggtiyrfhvkvitardalhvldgllheehytgytdqvfalthllgfrfaprirdladtklfsqallkgkinvklikenyedirrlaysvqtgkvssalimgklgsyarqnklatalgemgriektlftldyisnkavrrrvqkglnkgeainalariiffgqrgefReralqdqlqraralniiinaisvwntvymekaveelkargefredlmpyawplgwehinflgeykfeglhdtgqmnlrplrik >7qd5_D: title=CRYO-EM STRUCTURE OF TN4430 TNPA TRANSPOSASE FROM TN3 FAMILY IN COMPLEX WITH 48 BP LONG TRANSPOSON END DNA organism=? DNA sequence DA(F1030):DT(E71) DT(F1031):DG(E69) DT(F1033):DA(E68) DT(F1034):DA(E67) DA(F1035):DT(E66) DG(F1036):DC(E65) DC(F1037):DG(E64) DG(F1038):DC(E63) DT(F1039):DA(E62) DG(F1040):DC(E61) DG(F1041):DC(E60) DT(F1042):DA(E59) DT(F1043):DA(E58) DT(F1044):DA(E57) DT(F1045):DA(E56) DT(F1046):DA(E55) DT(F1047):DA(E54) DT(F1048):DA(E53) DC(F1049):DG(E52) DC(F1050):DG(E51) DG(F1051):DC(E50) DA(F1052):DT(E49) DA(F1053):DT(E48) DA(F1054):DT(E47) DT(F1055):DA(E46) DG(F1056):DC(E45) DC(F1057):DG(E44) DT(F1058):DA(E43) DG(F1059):DC(E42) DG(F1060):DC(E41) DC(F1061):DG(E40) DG(F1062):DC(E39) DG(F1063):DC(E38) DT(F1064):DA(E37) DA(F1065):DT(E36) DC(F1066):DG(E35) DC(F1067):DG(E34) DC(F1068):DG(E33) DC(F1069):DG(E32) DC(F1070):DG(E31) DA(F1071):DT(E30) DT(F1072):DA(E29) DG(F1073):DC(E28) chainD ( 2) VAL3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) LYS4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG44 0 0 11 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG97 0 0 0 0 0 0 13 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) ASN99 0 0 0 0 0 0 0 0 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) TRP102 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) TYR161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) GLU261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) TYR263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ARG267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (603) THR623 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (614) TYR634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (615) ARG635 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 17 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (619) ASN639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (825) ARG899 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence gVKqllseaqrnelmdlsrltewdlvtfhtfskhdlhlilkhRrgynrlgfalqlvlirypgwslteykdipqyvvayvasqlqippeeflvyakRgNtlWehlgeirteygyqnfsseyketllqflvqqamdnnntlylieitistlrkmkvilpamYviedivweakqqadqkvysilhdglvqeqkdqldalllptingksplawlkdvpaqpspesflkvidrlqfvqkigltidttkintnrlrqlarlgskyEpYafrRfnevkrysmlvsflleitqdlidyaieihdrlmmnlqtkgkkeqdeiqqangkklnekilqfitvcgtlieaketgkdafaaldevmswnemvesveeakqlsrplnydyldllntrysyvrryaptllrslhfratksgepvlqaldtihelnetgkrkvphgaplhfvsnrwqkhvydddgninrhyyelaaltelrnhirsgdifvsgsrhhkafddylipydewnevsnipngltaplkaedyitdrinrlnehlewlsrldrgtpeeakafskllhsmlprikltdllievaswtgfhdqfihastnqspdqeeqnivlatlmamgtniglTkmaeatpgisYRqmaNasqwrmyddamvraqsilvnfqkeqklssywgsdgmrlsggtiyrfhvkvitardalhvldgllheehytgytdqvfalthllgfrfaprirdladtklfsqallkgkinvklikenyedirrlaysvqtgkvssalimgklgsyarqnklatalgemgriektlftldyisnkavrrrvqkglnkgeainalariiffgqrgefReralqdqlqraralniiinaisvwntvymekaveelkargefredlmpyawplgwehinflgeykfeglhdtgqmnlrplrik >7qd6_D: title=CRYO-EM STRUCTURE OF TN4430 TNPA TRANSPOSASE FROM TN3 FAMILY IN COMPLEX WITH STRAND-TRANSFER LIKE DNA PRODUCT organism=? DNA sequence DA(F1030):DT(E71) DT(F1031):DA(E70) DC(F1032):DG(E69) DT(F1033):DA(E68) DT(F1034):DA(E67) DA(F1035):DT(E66) DG(F1036):DC(E65) DC(F1037):DG(E64) DG(F1038):DC(E63) DT(F1039):DA(E62) DG(F1040):DC(E61) DG(F1041):DC(E60) DT(F1042):DA(E59) DT(F1043):DA(E58) DT(F1044):DA(E57) DT(F1045):DA(E56) DT(F1046):DA(E55) DT(F1047):DA(E54) DT(F1048):DA(E53) DC(F1049):DG(E52) DC(F1050):DG(E51) DG(F1051):DC(E50) DA(F1052):DT(E49) DA(F1053):DT(E48) DA(F1054):DT(E47) DT(F1055):DA(E46) DG(F1056):DC(E45) DC(F1057):DG(E44) DT(F1058):DA(E43) DG(F1059):DC(E42) DG(F1060):DC(E41) DC(F1061):DG(E40) DG(F1062):DC(E39) DG(F1063):DC(E38) DT(F1064):DA(E37) DA(F1065):DT(E36) DC(F1066):DG(E35) DC(F1067):DG(E34) DC(F1068):DG(E33) DC(F1069):DG(E32) chainD ( 2) VAL3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) LYS4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG44 0 0 0 6 12 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) ARG97 0 0 0 0 0 0 0 15 15 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) ASN99 0 0 0 0 0 0 0 0 0 5 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) TRP102 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) GLU103 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) TYR161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) GLU261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 (262) TYR263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 10 0 0 0 0 0 0 0 0 0 0 (266) ARG267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (614) TYR634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (615) ARG635 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 19 6 0 0 0 0 0 0 0 0 0 (619) ASN639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (825) ARG899 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence gVKqllseaqrnelmdlsrltewdlvtfhtfskhdlhlilkhRrgynrlgfalqlvlirypgwslteykdipqyvvayvasqlqippeeflvyakRgNtlWEhlgeirteygyqnfsseyketllqflvqqamdnnntlylieitistlrkmkvilpamYviedivweakqqadqkvysilhdglvqeqkdqldalllptingksplawlkdvpaqpspesflkvidrlqfvqkigltidttkintnrlrqlarlgskyEpYafrRfnevkrysmlvsflleitqdlidyaieihdrlmmnlqtkgkkeqdeiqqangkklnekilqfitvcgtlieaketgkdafaaldevmswnemvesveeakqlsrplnydyldllntrysyvrryaptllrslhfratksgepvlqaldtihelnetgkrkvphgaplhfvsnrwqkhvydddgninrhyyelaaltelrnhirsgdifvsgsrhhkafddylipydewnevsnipngltaplkaedyitdrinrlnehlewlsrldrgtpeeakafskllhsmlprikltdllievaswtgfhdqfihastnqspdqeeqnivlatlmamgtnigltkmaeatpgisYRqmaNasqwrmyddamvraqsilvnfqkeqklssywgsdgmrlsggtiyrfhvkvitardalhvldgllheehytgytdqvfalthllgfrfaprirdladtklfsqallkgkinvklikenyedirrlaysvqtgkvssalimgklgsyarqnklatalgemgriektlftldyisnkavrrrvqkglnkgeainalariiffgqrgefReralqdqlqraralniiinaisvwntvymekaveelkargefredlmpyawplgwehinflgeykfeglhdtgqmnlrplrik >7qen_ABD:P-loop_containing_nucleoside_triphosphate_hydrolases;ARM_repeat; title=S.C. CONDENSIN CORE IN DNA- AND ATP-BOUND STATE organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(G1):DA(F35) DT(G2):DA(F34) DT(G3):DA(F33) DT(G4):DA(F32) DT(G5):DA(F31) DT(G6):DA(F30) DT(G7):DA(F29) DT(G8):DA(F28) DT(G9):DA(F27) DT(G10):DA(F26) DT(G11):DA(F25) DT(G12):DA(F24) DT(G13):DA(F23) DT(G14):DA(F22) DT(G15):DA(F21) DT(G16):DA(F20) DT(G17):DA(F19) DT(G18):DA(F18) DT(G19):DA(F17) DT(G20):DA(F16) DT(G21):DA(F15) DT(G22):DA(F14) DT(G23):DA(F13) DT(G24):DA(F12) DT(G25):DA(F11) DT(G26):DA(F10) DT(G27):DA(F9) DT(G28):DA(F8) DT(G29):DA(F7) DT(G30):DA(F6) DT(G31):DA(F5) DT(G32):DA(F4) DT(G33):DA(F3) DT(G34):DA(F2) DT(G35):DA(F1) chainB ( 72) ARG205 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (112) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence mkveeliidgfksyatrtvitdwdpqfnaitglngsgksnildaicfvlgiasmstvrasslqdliykrgqagvtkasvtivfdntdksnspigftnspqisvtrqvvlggTskylinghrapqqsvlqlfqsvqlninnpnflimqgkitkvlnmkpseilslieeaagtkmfedrrekaertmskketklqenrtllteeiepkleklrnekrmflefqstqtdlekterivvsyeyyfdlvrnivkqnegidldtyrerskqlnekfqelrkkvnpnimnmienvekkeaalktmiktiekdkmkiqetisklneykretlvktwekvtldfgnifadllpnsfaklvpcegkdvtqglevkvklgniwkeslielsggqrslialslimallqfrpapmyildqvdaaldlshtqnighliktrfkgsqfivvslkegmfananrvfrtrfqdgtsvvsim/xxxxxxxxxxxxxxxxqqsrlfinelvlenfksyagkqvvgpfhtsfsavvgpngsgksnvidsmlfvfgfRankmrqdrlsdlihkseafpslqscsvavhfqyvidessgtsrideekpgliitrkafknnsskyyinekessytevtkllknegidldhkrflilqgeveniaqmkpkaekesddglleylediigtanykplieermgqienlnevclekenrfeivdrelaefkrrkldlnnavqkrdevkeqlgilkkkrfdefmagfniismtlkemyqmitmggnaelelvdsldpfsegvtfsvmppkkswrnitnlsggektlsslalvfalhkykptplyvmdqidaaldfrnvsivanyikertknaqfivislrnnmfelaqqlvgvykrdnrtksttiknidiln/fslseyltkfqttdresyprlqdpsrelnviidqlavspeqidaspdslealidlchdfphltpklqtqlsYlissslsnlskdikanlssnvnfteigglipqwkrhleeygyliqvlltflqdelhkvssqstnlnrsaknskndsanvelfkrdcnqmenllesitklleinlskifqttpekdlfiglftrplfvlleiepvtkvsslkmfiqrilamcvknhgqsssiqsslmtnltyflhlsvfnaellkllndeynypqltedilkeistrvfnakdttgpkaisnfliklselspgimlrqmnlvitllnnssitlrcsvveacgnivaelaqdpqtmehykqqiavlielleerfqdsnpyvrtkaiqgcskicdlsskfnkskakftslavrslqdrsslvrrnsvkllsklllkhpfkaihgsqlrlseweeylkgsesqlnklklmivyykdaisfikeihksielisnllfsknrnevlesmdflvladafdielsefgikkmlhlvwmkgtndegtsisvhliecykqlfltapdscnmqekaahiaknlinlsigasiadlasleqllgmmyeqklidqhvinilwaiynsaskagfskeqihgsiiilgmlsladneialkglesllniglgavglkdltlcrysclalermvpkrstiainqeledvavkklyaiiinytkdneyypmceqalsalftisskpdilatdlirektmmtfgkpqssrvvslsqllfivgqvaiktlvylekceaefkkrkieaetrngktneddftdaiqfvkenellfgeksilgkfcpiveeivsnssrfsdpmlqrtatlcleklmclsskycekslpllitvmekspdptirsnavlglgdmavcfnnlvdentdylyrrlhdenlmvqrtclmtvtflilagqvkvkgqlgemakcldnpdqgisdmcrlfftelaskdnaiyngfidifsnlssddllgkesfkkiikflltfidkerhqkqlneklvgrlrkcetqkqwddiafvlnnlpyknedvtalleqgfkvv >7qfw_AB:ARM_repeat; title=S.C. CONDENSIN PERIPHERAL YCG1 SUBCOMPLEX BOUND TO DNA organism=SACCHAROMYCES CEREVISIAE S288C DNA sequence DT(D1):DA(C32) DT(D2):DA(C31) DT(D3):DA(C30) DT(D4):DA(C29) DT(D5):DA(C28) DT(D6):DA(C27) DT(D7):DA(C26) DT(D8):DA(C25) DT(D9):DA(C24) DT(D10):DA(C23) DT(D11):DA(C22) DT(D13):DA(C21) DT(D14):DA(C20) DT(D16):DA(C18) DT(D18):DA(C16) DT(D19):DA(C14) DT(D20):DA(C13) DT(D21):DA(C12) DT(D22):DA(C11) DT(D23):DA(C10) DT(D24):DA(C9) DT(D25):DA(C8) DT(D26):DA(C7) DT(D27):DA(C6) DT(D28):DA(C5) DT(D29):DA(C4) DT(D30):DA(C3) DT(D31):DA(C2) DT(D32):DA(C1) chainA (801) VAL888 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 chainB prot.sequence idintkifnsvaevfqkaqgsyaghrkhiavlkkiqskaveqgyedafnfwfdklvtkilplkkneiigdrivklvaafiaslerelilakkqnykltndeegifsrfvdqfirhvlrgvespdknvrfrvlqllavimdnigeideslfnllilslnkriydreptvriqavfcltkfqdeeqtehnfeatrtlvasiqndpsaevrraamlnlindnntrpyilerardvnivnrrlvysrilksmgrkcfddiephifdqliewgledrelsvrnackrliahdwlnaldgdliellekldvsrssvcvkaiealfqsrpdilskikfpesiwkdftveiaflfraiylycldnnitemleenfpeasklsehlnhyillryhhnhfdyntlefiieqlsiaaerydysdevgrrsmltvvrnmlalttlseplikigirvmkslsinekdfvtmaieiindirdddiekqeqeekekeassativlcltrssymlelvntplteniliaslmdtlitpavrntapnirelgvknlglcclldvklaidnmyilgmcvskgnaslkyialqvivdifsvhgntvvdgegkvdsislhkifykvlknnglpecqviaaeglcklfladvftdddlfetlvlsyfspinssnealvqafafcipvycfshpahqqrmsrtaadillrlcvlwddlqssvipevdreamlkpniifqqllfwtdprnlvnqtgstkkdtvqltflidvlkiyaqiekkeikkmiitninaiflsseqdystlkelleysddiaendnldnVsknaldklrnnlnslieeiner/fekdlmayfdenlnrnwrgrehwkvrnvleidffktddsfedkvfaskgrtkidmpiknrkndthyllpddfhfstdritrlfikpaqkmslfs >7qhs_234567:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=S. CEREVISIAE CMGE NUCLEATING ORIGIN DNA MELTING organism=? DNA sequence DA(A1):DT(B26) DA(A2):DT(B25) DA(A3):DT(B24) DA(A4):DT(B23) DA(A5):DT(B22) DA(A6):DT(B21) DA(A7):DT(B20) DA(A8):DT(B19) DA(A9):DT(B18) DA(A10):DT(B17) DA(A11):DT(B16) DA(A12):DT(B15) DA(A13):DT(B14) DA(A14):DT(B13) DA(A15):DT(B12) DA(A16):DT(B11) DA(A17):DT(B10) DA(A18):DT(B9) DA(A19):DT(B8) DA(A20):DT(B7) DA(A21):DT(B6) DA(A22):DT(B5) DA(A23):DT(B4) DA(A24):DT(B3) DA(A25):DT(B2) DA(A26):DT(B1) chain2 (403) LYS582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (410) TRP589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chain3 chain4 chain6 (255) LEU421 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) THR423 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (258) ARG424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (414) ARG614 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 chain7 (298) PHE363 0 0 0 0 0 0 0 0 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) LEU366 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain5 (370) ARG455 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 (375) ARG460 0 0 0 0 0 0 0 0 0 0 2 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) PHE462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eltleslsnvkansysewitqpnvsrtiarelksflleytdetgrsvygarirtlgemnseslevnyrhlaeskailalflakcpeemlkifdlvameatelhypdyarihseihvrisdfptiyslrelresnlsslvrvtgvvtrrtgvfpqlkyvkfnclkcgsilgpffqdsneeirisfctnckskgpfrvngektvyrnyqrvtlqeapgtvppgrlprhrevilladlvdvskpgeevevtgiyknnydgnlnakngfpvfatiieansikrregntanegeegldvfswteeeerefrkisrdrgiidkiissmapsiyghrdiktavacslfggvpknvngkhsirgdinvlllgdpgtaksqilkyvektahravfatgqgasavgltasvrKdpitkeWtleggalvladkgvclidefdkmndqdrtsiheameqqsisiskagivttlqarcsiiaaanpnggrynstlplaqnvsltepilsrfdilcvvrdlvdeeaderlatfvvdshvrshpelnarqrrlqrqrkkeeeispipqellmkyihyartkiypklhqmdmdkvsrvyadlrresistgsfpitvrhlesilriaesfakmrlsefvssydldraikvvvdsfvdaqkvsvrrqlrrsfaiytlg/davfgdrvrrfqefldtftsyrdsvrsiqvynsnnaanynddnilphriiislddlrefdrsfwsgilvepayfippaekaltdladsmddvphpnasavssrhpwklsfkgsfgahalsprtltaqhlnklvsvegivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnkltteygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfkslgaggmnqsnsntligfktlilgntvyplrqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattgrgssgvgltaavttdretgerrleAgamvlaDrgvvcidefdkmtdvdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrthrylppgylegepvrerlnlslavgedpklvtipflrkyvqyakervipqltqeainvivknytdlrnddntkkspitartletlirlatahakvrlsktvnkvdakvaanllrfallged/lriiwgtnvsiqecttnfrnflmsfkykfrkildereefinnttdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransrqrvlkslyktyvdvvhvkkvrqitdqdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktftkggryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitrDvdtkqlVlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledvlpvefltmyisyakehihpiiteaaktelvrayvgmrktattrqlesmirlaeahakmklknvveledvqeavrlirsaikd/dddnteiiksfknfilefrldsqfiyrdqlrnnilvknysltvnmehligynediykklsdepsdiiplfetaitqvakrisilnslptfqlilnsnanqiplrdldsehvskivrlsgiiistsvlssratylsimcrncrhttsitinnfnvslprsclsncgpdpyiiihesskfidqqflklqeipelvpvgemprnltmtcdryltnkvipgtrvtivgiysiynskgsgvairtpyikilgiqsdvetssiwnsvtmfteeeeeeflqlsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllgdpgtaksqllkfvekvspiavytsgkgssaagltasvqRdpmtReFyleggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanpiygryddlkspgdnidfqttilsrfdmifivkddhneerdisianhvinihtgnanamqnqqeengseisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinelesterssipitirqleaiiriteslaklelspiaqerhvdeairlfqastmdaasqdpigglnqasgtslseirrfeqelkrrlpigwstsyqtlrrefvdthrfsqlaldkalyalekhetiqlrhqgqniyrsgv/kvddvtgekvreafeqfledfsvqvekvyraqiefmkiydlntiyidyqhlsmrengalamaiseqyyrflpflqkglrrvvrkyapellntservfqisffnlptvhrirdirsekigsllsisgtvtrtsevrpelykasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsrfldwqkvriqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpdvtqlglpgvkpsstLdTRgisktteglnsgvtglrslgvrdltykisflachvisigerdqevflnslssdeinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsgkassaagltaavvRdeeggdytieagalmladngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkrdeaieppfsaeqlrryikyartfkpiltkearsylvekykelrkddasyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsi/alpsiqlpvdynnlfneitdflvtfkqdtekgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcraidnnmplptkeidykddvldvilnqrrlrnermlfppnltrryflyfkplsqncarryrkkaisskplsvrqikgdflgqlitvrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflpapytgFkaLkaglltetyleaqfvrqhksltsdveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrvgdgmkirgdinvclmgdpgvaksqllkaickisprgvyttgkgssgvgltaavmkdpvtdemileggalvladngiccidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskremdskfsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyq >7qhs_2:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=S. CEREVISIAE CMGE NUCLEATING ORIGIN DNA MELTING organism=? DNA sequence DT(B1):DA(A26) DT(B2):DA(A25) DT(B3):DA(A24) DT(B4):DA(A23) DT(B5):DA(A22) DT(B6):DA(A21) DT(B7):DA(A20) DT(B8):DA(A19) DT(B9):DA(A18) DT(B10):DA(A17) DT(B11):DA(A16) DT(B12):DA(A15) DT(B13):DA(A14) DT(B14):DA(A13) DT(B15):DA(A12) DT(B16):DA(A11) DT(B17):DA(A10) DT(B18):DA(A9) DT(B19):DA(A8) DT(B20):DA(A7) DT(B21):DA(A6) DT(B22):DA(A5) DT(B23):DA(A4) DT(B24):DA(A3) DT(B25):DA(A2) DT(B26):DA(A1) chain2 (403) LYS582 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (410) TRP589 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eltleslsnvkansysewitqpnvsrtiarelksflleytdetgrsvygarirtlgemnseslevnyrhlaeskailalflakcpeemlkifdlvameatelhypdyarihseihvrisdfptiyslrelresnlsslvrvtgvvtrrtgvfpqlkyvkfnclkcgsilgpffqdsneeirisfctnckskgpfrvngektvyrnyqrvtlqeapgtvppgrlprhrevilladlvdvskpgeevevtgiyknnydgnlnakngfpvfatiieansikrregntanegeegldvfswteeeerefrkisrdrgiidkiissmapsiyghrdiktavacslfggvpknvngkhsirgdinvlllgdpgtaksqilkyvektahravfatgqgasavgltasvrKdpitkeWtleggalvladkgvclidefdkmndqdrtsiheameqqsisiskagivttlqarcsiiaaanpnggrynstlplaqnvsltepilsrfdilcvvrdlvdeeaderlatfvvdshvrshpelnarqrrlqrqrkkeeeispipqellmkyihyartkiypklhqmdmdkvsrvyadlrresistgsfpitvrhlesilriaesfakmrlsefvssydldraikvvvdsfvdaqkvsvrrqlrrsfaiytlg >7qqo_B: title=SPCAS9 BOUND TO AAVS1 OFF-TARGET1 DNA SUBSTRATE organism=? DNA sequence DG(D0):DC(C0) DG(D1):DC(C-1) DG(D2):DC(C-2) DT(D3):DA(C-3) DA(D4):DT(C-4) DT(D5):DA(C-5) DT(D6):DA(C-6) DG(D7):DC(C-7) chainB (1072) LYS1107 3 6 1 0 0 0 0 0 (1184) GLU1219 0 1 0 0 0 0 0 0 (1294) ARG1333 9 8 1 0 0 0 0 0 (1296) ARG1335 0 13 10 3 0 0 0 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlstydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaerlseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitlairkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashygspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlgg >7qqp_B: title=SPCAS9 BOUND TO AAVS1 OFF-TARGET3 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DA(D0):DT(C0) DG(D1):DC(C-1) DG(D2):DC(C-2) DT(D3):DA(C-3) DA(D4):DT(C-4) DT(D5):DA(C-5) DT(D6):DA(C-6) DG(D7):DC(C-7) chainB (1077) LYS1107 4 6 0 0 0 0 0 0 (1189) GLU1219 0 1 0 0 0 0 0 0 (1301) ARG1333 8 10 2 0 0 0 0 0 (1303) ARG1335 0 13 12 2 0 0 0 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitlaeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyekgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7qqq_B: title=SPCAS9 BOUND TO AAVS1 OFF-TARGET4 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DA(C0):DT(D0) chainB (1076) LYS1107 0 0 0 0 0 0 5 2 (1188) GLU1219 0 0 0 0 0 0 2 0 (1302) ARG1333 0 0 0 0 0 2 14 16 (1304) ARG1335 0 0 0 0 4 13 13 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsggdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitlaeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlgg >7qqr_B: title=SPCAS9 BOUND TO AAVS1 OFF-TARGET5 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DA(C0):DT(D0) chainB (1076) LYS1107 0 0 0 0 0 0 6 3 (1188) GLU1219 0 0 0 0 0 0 2 0 (1301) ARG1333 0 0 0 0 0 2 11 15 (1303) ARG1335 0 0 0 0 6 14 12 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitleirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyelkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7qqs_B: title=SPCAS9 BOUND TO FANCF ON-TARGET DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DA(C0):DT(D0) chainB (1073) LYS1107 0 0 0 0 0 0 6 4 (1185) GLU1219 0 0 0 0 0 0 1 0 (1299) ARG1333 0 0 0 0 0 1 11 13 (1301) ARG1335 0 0 0 0 5 11 13 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdSptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlgg >7qqt_B: title=SPCAS9 BOUND TO FANCF OFF-TARGET1 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DT(C0):DA(D0) chainB (1075) LYS1107 0 0 0 0 0 0 6 4 (1187) GLU1219 0 0 0 0 0 0 2 0 (1299) ARG1333 0 0 0 0 0 2 10 8 (1301) ARG1335 0 0 0 0 6 11 13 0 prot.sequence dkkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarenknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitlkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdSptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyekgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlgg >7qqu_B: title=SPCAS9 BOUND TO FANCF OFF-TARGET2 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DT(C0):DA(D0) chainB (1069) LYS1107 0 0 0 0 0 1 6 4 (1181) GLU1219 0 0 0 0 0 0 1 0 (1293) ARG1333 0 0 0 0 0 1 11 8 (1295) ARG1335 0 0 0 0 5 12 13 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdSptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyekgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlgg >7qqv_B: title=SPCAS9 BOUND TO FANCF OFF-TARGET3 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DC(D0):DG(C0) DG(D1):DC(C-1) DG(D2):DC(C-2) DT(D3):DA(C-3) DA(D4):DT(C-4) DT(D5):DA(C-5) DT(D6):DA(C-6) DG(D7):DC(C-7) chainB (1072) LYS1107 5 5 0 0 0 0 0 0 (1184) GLU1219 0 2 0 0 0 0 0 0 (1298) ARG1333 8 12 2 0 0 0 0 0 (1300) ARG1335 0 12 12 7 0 0 0 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdSptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7qqw_B: title=SPCAS9 BOUND TO FANCF OFF-TARGET4 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DT(C0):DA(D0) chainB (1059) LYS1107 0 0 0 0 0 0 7 5 (1171) GLU1219 0 0 0 0 0 0 1 0 (1283) ARG1333 0 0 0 0 0 2 8 4 (1285) ARG1335 0 0 0 0 2 13 13 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdqlskdtydddldnllaqigyadlflaaknlsdaillsdilteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykatakyffysnimnffktekrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlgg >7qqx_B: title=SPCAS9 BOUND TO FANCF OFF-TARGET5 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DT(C0):DA(D0) chainB (1077) LYS1107 0 0 0 0 0 0 6 4 (1189) GLU1219 0 0 0 0 0 0 1 0 (1303) ARG1333 0 0 0 0 0 2 10 8 (1305) ARG1335 0 0 0 0 2 13 14 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitlaeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7qqz_B: title=SPCAS9 BOUND TO FANCF OFF-TARGET7 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DA(D0):DT(C0) DG(D1):DC(C-1) DG(D2):DC(C-2) DT(D3):DA(C-3) DA(D4):DT(C-4) DT(D5):DA(C-5) DT(D6):DA(C-6) DG(D7):DC(C-7) chainB (1078) LYS1107 4 6 0 0 0 0 0 0 (1190) GLU1219 0 1 0 0 0 0 0 0 (1302) ARG1333 8 10 2 0 0 0 0 0 (1304) ARG1335 0 12 12 5 0 0 0 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarenqknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitgeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyekgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7qr0_B: title=SPCAS9 BOUND TO TRAC OFF-TARGET1 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DT(D0):DA(C0) DG(D1):DC(C-1) DG(D2):DC(C-2) DT(D3):DA(C-3) DA(D4):DT(C-4) DT(D5):DA(C-5) DT(D6):DA(C-6) DG(D7):DC(C-7) chainB (1076) LYS1107 3 5 1 0 0 0 0 0 (1188) GLU1219 0 1 0 0 0 0 0 0 (1299) ARG1333 13 13 2 0 0 0 0 0 (1301) ARG1335 0 14 13 6 0 0 0 0 prot.sequence dkkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitlirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashykgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlgg >7qr1_B: title=SPCAS9 BOUND TO TRAC OFF-TARGET2 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DA(C0):DT(D0) chainB (1070) LYS1107 0 0 0 0 0 2 6 2 (1182) GLU1219 0 0 0 0 0 0 1 0 (1294) ARG1333 0 0 0 0 0 2 11 13 (1296) ARG1335 0 0 0 0 3 12 12 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyekgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlgg >7qr5_B: title=SPCAS9 BOUND TO FANCF OFF-TARGET6 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DT(C0):DA(D0) chainB (1076) LYS1107 0 0 0 0 0 2 6 4 (1300) ARG1333 0 0 0 0 0 0 11 9 (1302) ARG1335 0 0 0 0 2 11 16 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitleirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagelqkgnelalpskyvnflylashyekgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7qr7_B: title=SPCAS9 BOUND TO AAVS1 OFF-TARGET2 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DC(C-7):DG(D7) DA(C-6):DT(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DA(C-3):DT(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DA(C0):DT(D0) chainB (1071) LYS1107 0 0 0 0 0 1 6 2 (1183) GLU1219 0 0 0 0 0 0 1 0 (1293) ARG1333 0 0 0 0 0 2 10 13 (1295) ARG1335 0 0 0 0 2 11 13 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlstydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarensrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdkatakyffysnimnffkteitlaeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashygspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7qr8_B: title=SPCAS9 BOUND TO PTPRC OFF-TARGET1 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DT(D0):DA(C0) DG(D1):DC(C-1) DG(D2):DC(C-2) DT(D3):DA(C-3) DA(D4):DT(C-4) DT(D5):DA(C-5) DT(D6):DA(C-6) DG(D7):DC(C-7) chainB (1072) LYS1107 2 5 1 0 0 0 0 0 (1184) GLU1219 0 2 0 0 0 0 0 0 (1298) ARG1333 13 11 2 0 0 0 0 0 (1300) ARG1335 0 12 13 7 0 0 0 0 (1302) THR1337 0 0 0 0 1 0 0 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarensrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdatakyffysnimnffkteitirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRyTstkevldatlihqsitglyetridlsqlgg >7qw5_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=ADENINE-SPECIFIC DNA METHYLTRANSFERASE M.BSECI COMPLEXED WITH ADOHCY AND COGNATE UNMETHYLATED DNA DUPLEX organism=Geobacillus stearothermophilus DNA sequence DC(Z1):DG(Y20) DG(Z2):DC(Y19) DA(Z3):DT(Y18) DT(Z4):DA(Y17) DC(Z5):DG(Y16) DG(Z6):DC(Y15) DA(Z7):DT(Y14) DT(Z8):DA(Y13) DG(Z9):DC(Y12) DC(Z10):DG(Y11) chainA ( 10) HIS19 0 0 0 0 0 0 25 0 0 0 (110) ASN133 0 0 0 0 0 0 11 0 0 0 (113) TYR136 0 0 0 0 0 0 48 0 0 0 (115) ARG138 0 0 0 0 5 28 0 0 0 0 (117) GLN140 0 0 0 6 3 0 0 0 0 0 (136) ARG159 0 8 10 8 0 0 0 0 0 0 (196) PHE219 0 0 0 0 0 0 11 0 0 0 (198) ALA221 0 0 0 0 0 0 2 0 0 0 (199) ALA222 0 0 0 0 0 0 0 4 3 0 (200) VAL223 0 0 0 0 0 0 1 0 0 0 (201) LEU224 0 0 0 0 0 0 0 1 0 0 (307) VAL335 0 0 2 3 0 0 0 0 0 0 (310) LYS338 0 0 0 6 8 6 0 0 0 0 (312) THR340 0 0 0 1 0 0 0 0 0 0 (395) TYR425 0 0 6 5 0 0 0 0 0 0 (407) TRP437 0 3 11 0 0 0 0 0 0 0 (408) VAL438 0 4 1 0 0 0 0 0 0 0 (424) ASP454 0 0 0 0 0 2 0 0 0 0 (425) THR455 0 0 0 0 0 0 0 5 0 0 (445) TYR475 0 0 0 1 0 0 0 0 0 0 (482) LEU512 0 0 0 0 0 0 2 13 0 0 (483) TYR513 0 0 0 0 0 0 0 14 6 0 (484) ALA514 0 0 0 0 0 0 0 0 2 0 (486) ARG516 0 0 0 0 0 0 0 9 0 0 (488) ARG518 0 0 0 0 1 22 0 0 0 0 prot.sequence vsrqkatgaHftpdklaeviakrildyfkgeknrvirvldpacgdgelllainkvaqsmniqleligvdfdidainianerlsrsghknfrlinkdflemlepvdiiiaNppYvRtQilgaekaqklrekfnlkgRvdlyqaflvamtqqlksngiigvitsnrylttkggestrkflvsnfnileimdlgdskfFeAAVLpaiffgekknkesnvpkffkiyeqsdieasssvnsefnsliellevnksglysvedktysislgkiispenykepwilatedeyewfmkvnqnaygfiedfahvkVgiKtTadsvfirsdwgelpeeqipedkllrpiisadqankwsvsgnnkkvlytheirdgqikainleefpraknyleshkerlasrkYvlkanRnwyeiWVphdpslwdkpkiifpDTspepkffyedkgsvvdgncYwiipkkensndilflimgicnskfmskyhdiafqnkLYAgRrRyltqyvnkypipdpesiyskeiislvrelvnnetqdineienrieklilrafdies >7qw6_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=ADENINE-SPECIFIC DNA METHYLTRANSFERASE M.BSECI COMPLEXED WITH ADOHCY AND COGNATE HEMIMETHYLATED DNA DUPLEX organism=Geobacillus stearothermophilus DNA sequence DG(Y11):DC(Z10) DC(Y12):DG(Z9) DA(Y13):DT(Z8) DT(Y14):DA(Z7) DC(Y15):DG(Z6) DG(Y16):DC(Z5) 6MA(Y17):DT(Z4) DT(Y18):DA(Z3) DC(Y19):DG(Z2) DG(Y20):DC(Z1) chainA ( 11) HIS19 0 0 0 25 0 0 0 0 0 0 (113) ASN133 0 0 0 11 0 0 0 0 0 0 (116) TYR136 0 0 0 45 0 0 0 0 0 0 (118) ARG138 0 0 0 0 12 4 0 0 0 0 (120) GLN140 0 0 0 0 0 3 5 0 0 0 (139) ARG159 0 0 0 0 0 0 6 11 6 0 (199) PHE219 0 0 0 11 0 0 0 0 0 0 (202) ALA222 0 1 10 0 0 0 0 0 0 0 (203) VAL223 0 0 0 1 0 0 0 0 0 0 (204) LEU224 0 0 2 0 0 0 0 0 0 0 (315) VAL335 0 0 0 0 0 0 1 2 0 0 (318) LYS338 0 0 0 0 2 8 8 0 0 0 (320) THR340 0 0 0 0 0 0 2 0 0 0 (405) TYR425 0 0 0 0 0 0 3 5 0 0 (417) TRP437 0 0 0 0 0 0 1 11 4 0 (418) VAL438 0 0 0 0 0 0 0 1 3 0 (434) ASP454 0 0 0 0 1 0 0 0 0 0 (435) THR455 0 0 10 0 0 0 0 0 0 0 (455) TYR475 0 0 0 0 0 0 1 0 0 0 (492) LEU512 0 0 22 2 0 0 0 0 0 0 (493) TYR513 0 2 26 0 0 0 0 0 0 0 (494) ALA514 0 2 0 0 0 0 0 0 0 0 (496) ARG516 0 0 18 0 0 0 0 0 0 0 (498) ARG518 0 0 0 1 13 4 0 0 0 0 prot.sequence tvsrqkatgaHftpdklaeviakrildyfkgeknrvirvldpacgdgelllainkvaqsmniqleligvdfdidainianerlsrsghknfrlinkdflemeelepvdiiiaNppYvRtQilgaekaqklrekfnlkgRvdlyqaflvamtqqlksngiigvitsnrylttkggestrkflvsnfnileimdlgdskfFeaAVLpaiffgekknkeyqkensnvpkffkiyeqsdieasssvnsefnsliellevnksglysvedktysislgkiispenykepwilatedeyewfmkvnqnaygfiedfahvkVgiKttadsvfirsdwgelpeeqipedkllrpiisadqankwsvslvgnnkkvlytheirdgqikainleefpraknyleshkerlasrkYvlkanrnwyeiWVphdpslwdkpkiifpDTspepkffyedkgsvvdgncYwiipkkensndilflimgicnskfmskyhdiafqnkLYAgRrRyltqyvnkypipdpesiyskeiislvrelvnnkketqdineienrieklilrafdies >7qw7_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=ADENINE-SPECIFIC DNA METHYLTRANSFERASE M.BSECI COMPLEXED WITH ADOHCY AND COGNATE FULLY METHYLATED DNA DUPLEX organism=Geobacillus stearothermophilus DNA sequence DG(Z1):DC(Y20) DC(Z2):DG(Y19) DA(Z3):DT(Y18) DT(Z4):6MA(Y17) DC(Z5):DG(Y16) DG(Z6):DC(Y15) 6MA(Z7):DT(Y14) DT(Z8):DA(Y13) DC(Z9):DG(Y12) DG(Z10):DC(Y11) chainA ( 11) HIS19 0 0 0 0 0 0 26 0 0 0 (113) ASN133 0 0 0 0 0 0 13 0 0 0 (115) PRO135 0 0 0 0 0 0 1 0 0 0 (116) TYR136 0 0 0 0 0 0 42 0 0 0 (118) ARG138 0 0 0 0 4 26 0 0 0 0 (120) GLN140 0 0 0 5 1 0 0 0 0 0 (139) ARG159 0 6 10 9 0 0 0 0 0 0 (199) PHE219 0 0 0 0 0 0 4 0 0 0 (201) ALA221 0 0 0 0 0 0 1 0 0 0 (202) ALA222 0 0 0 0 0 0 0 3 3 0 (203) VAL223 0 0 0 0 0 0 1 0 0 0 (204) LEU224 0 0 0 0 0 0 0 1 0 0 (312) VAL335 0 0 2 1 0 0 0 0 0 0 (315) LYS338 0 0 0 9 8 4 0 0 0 0 (317) THR340 0 0 0 2 0 0 0 0 0 0 (402) TYR425 0 0 6 4 0 0 0 0 0 0 (414) TRP437 0 3 10 2 0 0 0 0 0 0 (415) VAL438 0 5 1 0 0 0 0 0 0 0 (431) ASP454 0 0 0 0 0 4 0 0 0 0 (432) THR455 0 0 0 0 0 0 0 6 0 0 (452) TYR475 0 0 0 1 0 0 0 0 0 0 (489) LEU512 0 0 0 0 0 0 2 11 0 0 (490) TYR513 0 0 0 0 0 0 0 9 3 0 (491) ALA514 0 0 0 0 0 0 0 0 2 0 (493) ARG516 0 0 0 0 0 0 0 8 0 0 (495) ARG518 0 0 0 0 4 26 1 0 0 0 prot.sequence tvsrqkatgahftpdklaeviakrildyfkgeknrvirvldpacgdgelllainkvaqsmniqleligvdfdidainianerlsrsghknfrlinkdflemeelepvdiiianppyvRtQilgaekaqklrekfnlkgRvdlyqaflvamtqqlksngiigvitsnrylttkggestrkflvsnfnileimdlgdskffeaAvLpaiffgekknkeyqsnvpkffkiyeqsdieasssvnsefnsliellevnksglysvedktysislgkiispenykepwilatedeyewfmkvnqnaygfiedfahvkVgiKttadsvfirsdwgelpeeqipedkllrpiisadqankwsvslvgnnkkvlytheirdgqikainleefpraknyleshkerlasrkYvlkanrnwyeiWVphdpslwdkpkiifpDTspepkffyedkgsvvdgncYwiipkkensndilflimgicnskfmskyhdiafqnkLYAgRrRyltqyvnkypipdpesiyskeiislvrelvnnkketqdineienrieklilrafdies >7qwp_M: title=CRYOEM STRUCTURE OF BACTERIAL TRANSCRIPTION CLOSE COMPLEX (RPC) organism=? DNA sequence DC(T-1):DG(N1) DC(T0):DG(N0) DA(T1):DT(N-1) DG(T2):DC(N-2) DG(T3):DC(N-3) DG(T4):DC(N-4) DC(T5):DG(N-5) DT(T6):DA(N-6) DG(T7):DC(N-7) DA(T8):DT(N-8) DT(T9):DA(N-9) DC(T10):DG(N-10) DG(T11):DC(N-11) DT(T12):DA(N-12) DG(T13):DC(N-13) DC(T14):DG(N-14) DA(T15):DT(N-15) DA(T16):DT(N-16) DA(T17):DT(N-17) DA(T18):DT(N-18) DG(T19):DC(N-19) DT(T20):DA(N-20) DC(T21):DG(N-21) DG(T22):DC(N-22) DT(T23):DA(N-23) DG(T24):DC(N-24) DC(T25):DG(N-25) DC(T26):DG(N-26) DA(T27):DT(N-27) DG(T28):DC(N-28) DC(T29):DG(N-29) DC(T30):DG(N-30) DG(T31):DC(N-31) DT(T32):DA(N-32) DC(T33):DG(N-33) DT(T34):DA(N-34) chainM ( 1) MET15 0 0 0 0 0 0 0 0 0 0 0 0 32 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) THR16 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) LEU19 0 0 0 0 0 0 0 0 0 0 0 0 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ALA22 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ILE23 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) SER335 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) HIS377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) GLU378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) SER379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) THR380 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) SER382 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) ARG383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) ARG455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 11 0 0 0 0 0 0 0 (384) ARG456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 16 13 2 0 0 0 0 0 0 0 0 (385) THR457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence MTpqLqqAIrllqlstlelqqelqqalesnplleeelpvyqgettqtlqdylmwqveltpftdtdraiatsivdavddtgyltiqiedivdsigddeigleeveavlkriqrfdpvgvaakdlrdclliqlsqfaketpwleearliisdhldllanhdfrtlmrvtrlkeevlkeavnliqsldprpgqsiqtsepeyvipdvlvrkvsgrwtvelnadsiprlkinqqyaamgnsarndadgqfirsnlqearwliksleSrndtllrvsrciveqqqaffeqgeeymkpmvladiaqavemHESTiSRvttqkylhsprgifelkyffsshvntegggeasstairalvkkliaaenpakplsdskltsmlseqgimvaRRTvakyreslsippsnqrkqlv >7qxa_A:DNA/RNA_polymerases; title=CRYO-EM MAP OF HUMAN TELOMERASE-DNA-TPP1 COMPLEX (SHARPENED) organism=HOMO SAPIENS DNA sequence DT(N19) DT(N20) DA(N21) DG(N22) DG(N23) DG(N24) DT(N25) DT(N26) DA(N27) DG(N28) DG(N29) DG(N30) chainA (322) HIS500 0 0 0 0 0 0 16 0 0 0 0 0 (324) LYS502 0 0 0 0 0 1 0 0 0 0 0 0 (467) PHE645 18 0 0 0 0 0 0 0 0 0 0 0 (475) ARG653 2 0 0 0 0 0 0 0 0 0 0 0 (574) HIS752 0 0 0 0 16 0 0 0 0 0 0 0 (581) PHE759 6 6 0 0 0 0 0 0 0 0 0 0 (661) THR839 0 0 0 0 0 0 0 0 0 0 0 2 (781) THR959 0 0 0 0 0 0 1 0 0 0 0 0 (786) PHE964 0 0 0 0 9 0 0 0 0 0 0 0 (790) ARG968 0 0 0 0 5 0 0 0 0 0 0 0 (794) ARG972 0 0 0 0 11 0 0 0 0 0 0 0 (799) VAL977 0 0 0 0 0 0 0 1 0 0 0 0 (802) LEU980 0 0 0 0 0 0 0 18 8 0 0 0 prot.sequence aprcravrsllrshyrevlplatfvrrlgpqgwrlvqrgdpaafralvaqclvcvpwdarpppaapsfrqvsclkelvarvlqrlcergaknvlafgfallpeafttsvrsylpntvtdalrgsgawglllrrvgddvlvhllarcalfvlvapscayqvcgpplyqlgppvyaetkhflyssgdkeqlrpsfllsslrpsltgarrlvetiflgsrpwmpgtprrlprlpqrywqmrplflellgnhaqcpygvllkthcplradprrlvqllrqhsspwqvygfvraclrrlvppglwgsrhnerrflrntkkfislgkHaKlslqeltwkmsvrdcawlrrspgvgcvpaaehrlreeilakflhwlmsvyvvellrsffyvtettfqknrlffyrksvwsklqsigirqhlkrvqlrelseaevrqhrearpalltsrlrfipkpdglrpivnmdyvvgartFrrekraeRltsrvkalfsvlnyerarrpgllgasvlglddihrawrtfvlrvraqdpppelyfvkvdvtgaydtipqdrlteviasiikpqntycvrryavvqkaaHghvrkaFkshvstltdlqpymrqfvahlqetsplrdavvieqssslneassglfdvflrfmchhavrirgksyvqcqgipqgsilsTllcslcygdmenklfagirrdglllrlvddfllvtphlthaktflrtlvrgvpeygcvvnlrktvvnfpvedealggtafvqmpahglfpwcgllldtrtlevqsdyssyartsiraslTfnrgFkagRnmrRklfgVlrLkchslfldlqvnslqtvctniykilllqayrfhacvlqlpfhqqvwknptfflrvisdtaslcysilkaknagmslgakgaagplpseavqwlchqafllkltrhrvtyvpllgslrtaqtqlsrklpgttltaleaaanpalpsdfktild >7qxb_AP:Nucleic_acid-binding_proteins;DNA/RNA_polymerases; title=CRYO-EM MAP OF HUMAN TELOMERASE-DNA-TPP1-POT1 COMPLEX (SHARPENED MAP) organism=HOMO SAPIENS DNA sequence DG(N29) DG(N28) DA(N27) DT(N26) DT(N25) DG(N24) DG(N23) DG(N22) DA(N21) DT(N20) DT(N19) DG(N16) DT(N7) DT(N8) DA(N9) DG(N10) DG(N11) DG(N12) DT(N13) DT(N14):DG(N16) DA(N15) chainA ( 57) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 (174) LYS329 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) HIS500 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) LYS502 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (461) ALA642 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (462) ARG643 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 (464) PHE645 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 (472) ARG653 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 (474) THR655 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (478) LYS659 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (571) HIS752 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (573) HIS754 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (578) PHE759 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 (783) PHE964 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (787) ARG968 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (791) ARG972 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (792) LYS973 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (799) LEU980 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 26) PHE31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 36) THR41 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 37) ASP42 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 57) PHE62 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 84) TYR89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (123) TYR161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (185) TYR223 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 3 0 (218) HIS266 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 0 (223) TYR271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence cravrsllrshyrevlplatfvrrlgpqgwrlvqrgdpaafralvaqclvcvpwdaRpppaapsfrqvsclkelvarvlqrlcergaknvlafgfallpeafttsvrsylpntvtdalrgsgawglllrrvgddvlvhllarcalfvlvapscayqvcgpplyqlgppvyaetKhflyssgdkeqlrpsfllsslrpsltgarrlvetiflgsrpwmpgtprrlprlpqrywqmrplflellgnhaqcpygvllkthcplradprrlvqllrqhsspwqvygfvraclrrlvppglwgsrhnerrflrntkkfislgkHaKlslqeltwkmsvrdcawlrrspgvgcvpaaehrlreeilakflhwlmsvyvvellrsffyvtettfqknrlffyrksvwsklqsigirqhlkrvqlrelseaevrqhrearpalltsrlrfipkpdglRpivnmdyvvgARtFrrekraeRlTsrvKalfsvlnyerarrpgllgasvlglddihrawrtfvlrvraqdpppelyfvkvdvtgaYdtipqdrlteviasiikpqntycvrryavvqkaaHgHvrkaFkshvstltdlqpymrqfvahlqetsplrdavvieqssslneassglfdvflrfmchhavrirgksyvqcqgipqgsilsTllcslcygdmenklfagirrdglllrlvddfllvtphlthaktflrtlvrgvpeygcvvnlrktvvnfpvedealggtafvqmpahglfpwcgllldtrtlevqsdyssyartsirasltfnrgFkagRnmrRKlfgvlrLkchslfldlqvnslqtvctniykilllqayrfhacvlqlpfhqqvwknptfflrvisdtaslcysilkaknagmslgakgaagplpseavqwlchqafllkltrhrvtyvpllgslrtaqtqlsrklpgttltaleaaanpalpsdfktild/atnyiytplnqlkggtivnvygvvkFfkppylskgTDycsvvtivdqtnvkltcllFsgnyealpiiykngdivrfhrlkiqvYkketqgitssgfasltfiprtsskyfnflklcdvqpmqYfdltcqllgkaevdgasfllkvwdgtrtpfpswrvliqdlvlegdlshihrlqnltidilvYdnhvhvarslkvgsflriyslhtkllslefhlHggtsYgrgirvlpesnsdvdqlkkdlesanlta >7qxb_P:Nucleic_acid-binding_proteins; title=CRYO-EM MAP OF HUMAN TELOMERASE-DNA-TPP1-POT1 COMPLEX (SHARPENED MAP) organism=? DNA sequence DG(N29) DG(N28) DA(N27) DT(N26) DT(N25) DG(N24) DG(N23) DG(N22) DA(N21) DT(N20) DT(N19) DG(N16) DT(N7) DT(N8) DA(N9) DG(N10) DG(N11) DG(N12) DT(N13) DT(N14):DG(N16) DA(N15) chainP ( 26) PHE31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 36) THR41 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 37) ASP42 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 57) PHE62 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 84) TYR89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (123) TYR161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (185) TYR223 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 3 0 (218) HIS266 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 0 (223) TYR271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence atnyiytplnqlkggtivnvygvvkFfkppylskgTDycsvvtivdqtnvkltcllFsgnyealpiiykngdivrfhrlkiqvYkketqgitssgfasltfiprtsskyfnflklcdvqpmqYfdltcqllgkaevdgasfllkvwdgtrtpfpswrvliqdlvlegdlshihrlqnltidilvYdnhvhvarslkvgsflriyslhtkllslefhlHggtsYgrgirvlpesnsdvdqlkkdlesanlta >7qxi_M: title=CRYO-EM STRUCTURE OF RNA POLYMERASE-SIGMA54 HOLO ENZYME WITH PROMOTER DNA CLOSED COMPLEX organism=? DNA sequence DA(N-34):DT(T34) DG(N-33):DC(T33) DA(N-32):DT(T32) DC(N-31):DG(T31) DG(N-30):DC(T30) DG(N-29):DC(T29) DC(N-28):DG(T28) DT(N-27):DA(T27) DG(N-26):DC(T26) DG(N-25):DC(T25) DC(N-24):DG(T24) DA(N-23):DT(T23) DC(N-22):DG(T22) DG(N-21):DC(T21) DA(N-20):DT(T20) DC(N-19):DG(T19) DT(N-18):DA(T18) DT(N-17):DA(T17) DT(N-16):DA(T16) DT(N-15):DA(T15) DG(N-14):DC(T14) DC(N-13):DG(T13) DA(N-12):DT(T12) DC(N-11):DG(T11) DG(N-10):DC(T10) DA(N-9):DT(T9) DT(N-8):DA(T8) DC(N-7):DG(T7) DA(N-6):DT(T6) DG(N-5):DC(T5) DC(N-4):DG(T4) DC(N-3):DG(T3) DC(N-2):DG(T2) DT(N-1):DA(T1) DG(N0):DC(T0) DG(N1):DC(T-1) chainM ( 1) MET15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) THR16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) PRO17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) LEU19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ILE23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) SER332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) SER335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) LEU367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) HIS377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) GLU378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) SER379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) SER382 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) ARG383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) ARG455 0 0 0 0 0 0 0 8 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) ARG456 0 0 0 0 0 0 0 0 0 0 16 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) THR457 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS460 0 0 0 0 0 0 0 0 0 0 0 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence MTPqLqqaIrllqlstlelqqelqqalesnplleepvyqgettqtlqdylmwqveltpftdtdraiatsivdavddtgyltiqiedivdsigddeigleeveavlkriqrfdpvgvaakdlrdclliqlsqfaketpwleearliisdhldllanhdfrtlmrvtrlkeevlkeavnliqsldprpgqsiqtsepeyvipdvlvrkvsgrwtvelnadsiprlkinqqyaamgnsarndadgqfirsnlqearwlikSleSrndtllrvsrciveqqqaffeqgeeymkpmvLadiaqavemHEStiSRvttqkylhsprgifelkyffsshvntegggeasstairalvkkliaaenpakplsdskltsmlseqgimvaRRTvaKyreslsippsnqrkqlv >7qxs_AP:Nucleic_acid-binding_proteins;DNA/RNA_polymerases; title=CRYO-EM STRUCTURE OF HUMAN TELOMERASE-DNA-TPP1-POT1 COMPLEX (WITH POT1 SIDE CHAINS) organism=HOMO SAPIENS DNA sequence DG(N29) DG(N28) DA(N27) DT(N26) DT(N25) DG(N24) DG(N23) DG(N22) DA(N21) DT(N20) DT(N19) DG(N16) DT(N7) DT(N8) DA(N9) DG(N10) DG(N11) DG(N12) DT(N13) DT(N14):DG(N16) DA(N15) chainA ( 57) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 (174) LYS329 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) HIS500 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) LYS502 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (461) ALA642 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (462) ARG643 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 (464) PHE645 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 (472) ARG653 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 (474) THR655 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (478) LYS659 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (571) HIS752 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (573) HIS754 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (578) PHE759 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 (783) PHE964 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (787) ARG968 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (791) ARG972 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (792) LYS973 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (799) LEU980 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 25) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 26) PHE31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0 0 ( 33) SER38 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 36) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 37) ASP42 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 ( 43) THR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 53) THR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 55) LEU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 57) PHE62 0 0 0 0 0 0 0 0 0 0 0 0 0 38 5 0 0 0 0 0 0 ( 82) GLN87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) TYR89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0 0 0 ( 89) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 91) ILE96 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (123) TYR161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 2 0 (185) TYR223 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 23 0 (186) ASP224 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 11 0 (205) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (207) HIS245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (218) HIS266 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 27 0 (223) TYR271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 33 0 0 (225) ARG273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 prot.sequence cravrsllrshyrevlplatfvrrlgpqgwrlvqrgdpaafralvaqclvcvpwdaRpppaapsfrqvsclkelvarvlqrlcergaknvlafgfallpeafttsvrsylpntvtdalrgsgawglllrrvgddvlvhllarcalfvlvapscayqvcgpplyqlgppvyaetKhflyssgdkeqlrpsfllsslrpsltgarrlvetiflgsrpwmpgtprrlprlpqrywqmrplflellgnhaqcpygvllkthcplradprrlvqllrqhsspwqvygfvraclrrlvppglwgsrhnerrflrntkkfislgkHaKlslqeltwkmsvrdcawlrrspgvgcvpaaehrlreeilakflhwlmsvyvvellrsffyvtettfqknrlffyrksvwsklqsigirqhlkrvqlrelseaevrqhrearpalltsrlrfipkpdglRpivnmdyvvgARtFrrekraeRlTsrvKalfsvlnyerarrpgllgasvlglddihrawrtfvlrvraqdpppelyfvkvdvtgaYdtipqdrlteviasiikpqntycvrryavvqkaaHgHvrkaFkshvstltdlqpymrqfvahlqetsplrdavvieqssslneassglfdvflrfmchhavrirgksyvqcqgipqgsilsTllcslcygdmenklfagirrdglllrlvddfllvtphlthaktflrtlvrgvpeygcvvnlrktvvnfpvedealggtafvqmpahglfpwcgllldtrtlevqsdyssyartsirasltfnrgFkagRnmrRKlfgvlrLkchslfldlqvnslqtvctniykilllqayrfhacvlqlpfhqqvwknptfflrvisdtaslcysilkaknagmslgakgaagplpseavqwlchqafllkltrhrvtyvpllgslrtaqtqlsrklpgttltaleaaanpalpsdfktild/atnyiytplnqlkggtivnvygvvKFfkppylSkgTDycsvvTivdqtnvklTcLlFsgnyealpiiykngdivrfhrlkiQvYkketQgItssgfasltfiprtsskyfnflklcdvqpmqYfdltcqllgkaevdgasfllkvwdgtrtpfpswrvliqdlvlegdlshihrlqnltidilvYDnhvhvarslkvgsflriySlHtkllslefhlHggtsYgRgirvlpesnsdvdqlkkdlesanlta >7qxs_P:Nucleic_acid-binding_proteins; title=CRYO-EM STRUCTURE OF HUMAN TELOMERASE-DNA-TPP1-POT1 COMPLEX (WITH POT1 SIDE CHAINS) organism=HOMO SAPIENS DNA sequence DG(N29) DG(N28) DA(N27) DT(N26) DT(N25) DG(N24) DG(N23) DG(N22) DA(N21) DT(N20) DT(N19) DG(N16) DT(N7) DT(N8) DA(N9) DG(N10) DG(N11) DG(N12) DT(N13) DT(N14):DG(N16) DA(N15) chainP ( 25) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 26) PHE31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0 0 ( 33) SER38 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 36) THR41 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 37) ASP42 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 ( 43) THR48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 53) THR58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 55) LEU60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 57) PHE62 0 0 0 0 0 0 0 0 0 0 0 0 0 38 5 0 0 0 0 0 0 ( 82) GLN87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 84) TYR89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0 0 0 ( 89) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 91) ILE96 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (123) TYR161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 2 0 (185) TYR223 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 23 0 (186) ASP224 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 11 0 (205) SER243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (207) HIS245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (218) HIS266 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 27 0 (223) TYR271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 33 0 0 (225) ARG273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 prot.sequence atnyiytplnqlkggtivnvygvvKFfkppylSkgTDycsvvTivdqtnvklTcLlFsgnyealpiiykngdivrfhrlkiQvYkketQgItssgfasltfiprtsskyfnflklcdvqpmqYfdltcqllgkaevdgasfllkvwdgtrtpfpswrvliqdlvlegdlshihrlqnltidilvYDnhvhvarslkvgsflriySlHtkllslefhlHggtsYgRgirvlpesnsdvdqlkkdlesanlta >7r2k_K: title=ELONGATED CASCADE COMPLEX FROM TYPE I-A CRISPR-CAS SYSTEM organism=? DNA sequence DT(D42) DA(D43) DC(D44) DA(D45) DA(D46) DG(D47) DG(D48) DG(D49) DA(D50) chainK ( 25) ASN25 9 0 0 0 0 0 0 0 0 ( 27) ILE27 3 0 0 0 0 0 0 0 0 (183) MET183 6 0 0 0 0 0 0 0 0 (185) PHE185 1 0 0 0 0 0 0 0 0 prot.sequence myvrisgrirlnahslnaqggggtNyIeitktkvtvrtengwtvvevpaitgnmlkhwhfvgfvdyfkttpygvnlteralryngtrfgqgettatkangatvqlndeatiikeladadvhgflapktgrrrvslvkasfilptedfikevegerlitaikhnrvdvdekgaigsskegtaqMlFsreyatglygfsivldlglvgipqglpvkfeenqprpnividpnerkariesalkalipmlsgyiganlarsfpvfkveelvaiasegpipalvhgfyedyieanrsiiknaralgfnievftynvdlgedieatkvssveelvanlvkm >7r2k_KLS: title=ELONGATED CASCADE COMPLEX FROM TYPE I-A CRISPR-CAS SYSTEM organism=? DNA sequence DT(D42) DA(D43) DC(D44) DA(D45) DA(D46) DG(D47) DG(D48) DG(D49) DA(D50) chainK ( 25) ASN25 9 0 0 0 0 0 0 0 0 ( 27) ILE27 3 0 0 0 0 0 0 0 0 (183) MET183 6 0 0 0 0 0 0 0 0 (185) PHE185 1 0 0 0 0 0 0 0 0 chainL ( 90) GLN90 0 1 0 0 0 0 0 0 0 (124) LEU124 0 4 0 0 0 0 0 0 0 (126) PRO126 0 2 0 0 0 0 0 0 0 chainS (107) ASP107 0 0 0 0 3 0 0 0 0 (108) ALA108 0 0 0 0 2 0 0 0 0 prot.sequence myvrisgrirlnahslnaqggggtNyIeitktkvtvrtengwtvvevpaitgnmlkhwhfvgfvdyfkttpygvnlteralryngtrfgqgettatkangatvqlndeatiikeladadvhgflapktgrrrvslvkasfilptedfikevegerlitaikhnrvdvdekgaigsskegtaqMlFsreyatglygfsivldlglvgipqglpvkfeenqprpnividpnerkariesalkalipmlsgyiganlarsfpvfkveelvaiasegpipalvhgfyedyieanrsiiknaralgfnievftynvdlgedieatkvssveelvanlvkm/myvrisgrirlnahslnaqggggtnyieitktkvtvrtengwtvvevpaitgnmlkhwhfvgfvdyfkttpygvnlteralryngtrfgQgettatkangatvqlndeatiikeladadvhgfLaPktgrrrvslvkasfilptedfikevegerlitaikhnrvdvdekgaigsskegtaqmlfsreyatglygfsivldlglvgipqglpvkfeenqprpnividpnerkariesalkalipmlsgyiganlarsfpvfkveelvaiasegpipalvhgfyedyieanrsiiknaralgfnievftynvdlgedieatkvssveelvanlvkmv/mdillvclrfpffsvakrsyqvrtsfllpppsalkgalakglillkpekyasssldeaalkaikeiesklvdikavsvaplsplirnafllkrlrnlesgsnaeksDAmrreytftrellvayifknltqeeknlylkaamlidvigdteslatpvwasfvkpedkkaplafsapyteiyslrmyiekmrvspeysqeeifylpieerrykrivyyariyppevekaltvdgevlgiwip >7r3x_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE CRYSTAL STRUCTURE OF THE L439V VARIANT OF POL2CORE IN COMPLEX WITH DNA AND AN INCOMING NUCLEOTIDE organism=Saccharomyces cerevisiae DNA sequence DT(P1):DA(T16) DA(P2):DT(T15) DA(P3):DT(T14) DC(P4):DG(T13) DC(P5):DG(T12) DG(P6):DC(T11) DC(P7):DG(T10) DG(P8):DC(T9) DT(P9):DA(T8) DT(P10):DA(T7) chainA (905) LYS967 0 0 0 0 0 0 0 0 5 4 (926) ARG988 0 0 0 0 0 0 7 8 0 0 prot.sequence kyntlsnnyalsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqenqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnannnvqrniynvkvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafdiettkpplkfpdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwvkrdsylpqgsqgvkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgtgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasmypnimttnrlqpdsiktcarklkwawrgeffpskmdeynmikralqnetfpnknkfskkkvltfdelsyadqvihikkrlteysrkvyhrvkvseivereaivcqrenpfyvdtvksfrdrryefkglaktwkgnlskidpsdkhardeakkmivlydslqlahkvilnsfygyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKryavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenrsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrki >7r3y_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE CRYSTAL STRUCTURE OF THE V426L VARIANT OF POL2CORE IN COMPLEX WITH DNA AND AN INCOMING NUCLEOTIDE organism=Saccharomyces cerevisiae DNA sequence DT(P1) DA(P2) DA(P3) DC(P4) DC(P5) DG(P6) DC(P7) DG(P8) DT(P9) DT(P10) chainA (886) LYS967 0 0 0 0 0 0 0 0 0 5 (907) ARG988 0 0 0 0 0 0 2 4 0 0 prot.sequence alsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqeqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnannnvqrniynvvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafdiettkpplkfpdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwlkrdsylpqgsqglkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgtgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasmypnimttnrlqpdsikatcarklkwawrgeffpskmdeynmikralqnetfpnltfdelsyadqvihikkrlteysrkvyhrvkvseivereaivcqrenpfyvdtvksfrdrryefkglaktwkgnlskidpsdkhardeakkmivlydslqlahkvilnsfygyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKryavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenrsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrkiat >7r5r_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF THE HUMAN CCAN CENP-A ALPHA-SATELLITE COMPLEX organism=HOMO SAPIENS DNA sequence DA(J-68):DT(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DG(J-64):DC(I64) DT(J-63):DA(I63) DT(J-62):DA(I62) DC(J-61):DG(I61) DA(J-60):DT(I60) DC(J-59):DG(I59) DA(J-58):DT(I58) DT(J-57):DA(I57) DA(J-56):DT(I56) DA(J-55):DT(I55) DA(J-54):DT(I54) DA(J-53):DT(I53) DA(J-52):DT(I52) DC(J-51):DG(I51) DT(J-50):DA(I50) DA(J-49):DT(I49) DG(J-48):DC(I48) DA(J-47):DT(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DA(J-42):DT(I42) DG(J-41):DC(I41) DC(J-40):DG(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DC(J-36):DG(I36) DT(J-35):DA(I35) DC(J-34):DG(I34) DA(J-33):DT(I33) DG(J-32):DC(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DA(J-29):DT(I29) DC(J-28):DG(I28) DT(J-27):DA(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DG(J-21):DC(I21) DT(J-20):DA(I20) DG(J-19):DC(I19) DA(J-18):DT(I18) DT(J-17):DA(I17) DG(J-16):DC(I16) DT(J-15):DA(I15) DT(J-14):DA(I14) DT(J-13):DA(I13) DG(J-12):DC(I12) DC(J-11):DG(I11) DA(J-10):DT(I10) DT(J-9):DA(I9) DT(J-8):DA(I8) DC(J-7):DG(I7) DA(J-6):DT(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DT(J-3):DA(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DA(J1):DT(I-1) DG(J2):DC(I-2) DA(J3):DT(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DA(J11):DT(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DC(J14):DG(I-14) DC(J15):DG(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DC(J20):DG(I-20) DA(J21):DT(I-21) DT(J22):DA(I-22) DA(J23):DT(I-23) DG(J24):DC(I-24) DA(J25):DT(I-25) DG(J26):DC(I-26) DC(J27):DG(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DG(J34):DC(I-34) DA(J35):DT(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DC(J38):DG(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DT(J56):DA(I-56) DG(J57):DC(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DA(J60):DT(I-60) DT(J61):DA(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) chainA chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 20) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence srrrqgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpni/rkesysvyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/gwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/rkesysvyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >7r5r_G:Histone-fold; title=STRUCTURE OF THE HUMAN CCAN CENP-A ALPHA-SATELLITE COMPLEX organism=? DNA sequence DC(I-64):DG(J64) DC(I-63):DG(J63) DA(I-62):DT(J62) DA(I-61):DT(J61) DT(I-60):DA(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DC(I-57):DG(J57) DA(I-56):DT(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DA(I-52):DT(J52) DC(I-51):DG(J51) DT(I-50):DA(J50) DA(I-49):DT(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DG(I-38):DC(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DT(I-35):DA(J35) DC(I-34):DG(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DG(I-27):DC(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DT(I-23):DA(J23) DA(I-22):DT(J22) DT(I-21):DA(J21) DG(I-20):DC(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DA(I-16):DT(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DT(I-11):DA(J11) DG(I-10):DC(J10) DT(I-9):DA(J9) DT(I-8):DA(J8) DC(I-7):DG(J7) DA(I-6):DT(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DT(I-3):DA(J3) DC(I-2):DG(J2) DT(I-1):DA(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DA(I3):DT(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DT(I6):DA(J-6) DG(I7):DC(J-7) DA(I8):DT(J-8) DA(I9):DT(J-9) DT(I10):DA(J-10) DG(I11):DC(J-11) DC(I12):DG(J-12) DA(I13):DT(J-13) DA(I14):DT(J-14) DA(I15):DT(J-15) DC(I16):DG(J-16) DA(I17):DT(J-17) DT(I18):DA(J-18) DC(I19):DG(J-19) DA(I20):DT(J-20) DC(I21):DG(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DA(I27):DT(J-27) DG(I28):DC(J-28) DT(I29):DA(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DC(I32):DG(J-32) DT(I33):DA(J-33) DG(I34):DC(J-34) DA(I35):DT(J-35) DG(I36):DC(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DG(I40):DC(J-40) DC(I41):DG(J-41) DT(I42):DA(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DT(I47):DA(J-47) DC(I48):DG(J-48) DT(I49):DA(J-49) DA(I50):DT(J-50) DG(I51):DC(J-51) DT(I52):DA(J-52) DT(I53):DA(J-53) DT(I54):DA(J-54) DT(I55):DA(J-55) DT(I56):DA(J-56) DA(I57):DT(J-57) DT(I58):DA(J-58) DG(I59):DC(J-59) DT(I60):DA(J-60) DG(I61):DC(J-61) DA(I62):DT(J-62) DA(I63):DT(J-63) DC(I64):DG(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) chainG ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp >7r6r_A:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF A MYCOBACTERIOPHAGE CLUSTER A2 IMMUNITY REPRESSOR:DNA COMPLEX organism=Mycobacterium phage TipsytheTRex DNA sequence DT(B22):DA(C80) DT(B23):DA(C79) DT(B24):DA(C78) DC(B25):DG(C77) DG(B26):DC(C76) DG(B27):DC(C75) DT(B28):DA(C74) DG(B29):DC(C73) DG(B30):DC(C72) DC(B31):DG(C71) DT(B32):DA(C70) DG(B33):DC(C69) DT(B34):DA(C68) DC(B35):DG(C67) DA(B36):DT(C66) DA(B37):DT(C65) DG(B38):DC(C64) DC(B39):DG(C63) DG(B40):DC(C62) DG(B41):DC(C61) DG(B42):DC(C60) chainA ( 30) THR44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 31) ARG45 0 0 0 0 0 0 0 0 0 0 4 15 3 0 0 0 0 0 0 0 0 ( 32) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 7 10 10 1 0 0 0 0 0 ( 33) ALA47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 35) SER49 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 36) TRP50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 ( 61) LYS75 0 0 0 0 0 0 0 0 1 10 9 0 0 0 0 0 0 0 0 0 0 ( 64) ASP78 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS79 0 0 0 0 0 0 3 7 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS81 0 0 0 0 5 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) GLN84 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ASP104 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG108 0 0 0 8 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sripltlseiedlrrkgfnqteiaelygvTRQAvSWhkktyggrlttrqivqqnwpwdtrKphDKsKafQrlrdhgeymrvgsfrtmseDkkkRllswwkmlrdndlvlefdpsiepyegmagggfryvprdisdddllirvnehtqltaegellwswpddieells >7r6t_D:His-Me_finger_endonucleases; title=HUMAN EXOG COMPLEXED WITH DRP-CONTAINING DNA organism=Homo sapiens DNA sequence DG(A2):DC(F9) DC(A3):DG(F8) DA(A4):DT(F7) DC(A5):DG(F6) DG(A6):DC(F5) DT(A7):DA(F4) DC(A8):DG(F3) DA(A9):DT(F2) DG(A10):DC(F1) chainD ( 48) ARG109 0 0 0 0 0 0 4 6 0 ( 52) LYS113 0 0 0 2 3 2 0 0 0 (111) SER172 0 0 0 0 0 0 0 5 3 (115) ASN176 0 0 0 0 0 0 0 0 3 (246) PHE307 0 0 0 0 0 0 0 0 1 (250) LEU311 0 0 0 0 0 0 0 0 15 (253) ARG314 0 0 0 0 0 0 0 0 2 (254) LYS315 0 0 0 0 0 0 0 0 4 prot.sequence leqfgfpltgtearcytnhalsydqakrvprwvlehiskskimgdadRkhcKfkpdpnipptfsafnedyvgsgwsrgamapagnnkfsskamaetfylsnivpqdfdnnSgywNriemycrelterfedvwvvsgpltlpqtrgdgkkivsyqvigednvavpshlykvilarrssvsteplalgafvvpneaigfqpqltefqvslqdleklsglvffphldrtsdirnicsvdtcklldfqeFtlyLstRKiegarsvlrlekimenlknaeiepddyfmsrye >7r6v_I:His-Me_finger_endonucleases; title=HUMAN EXOG COMPLEXED WITH DRP-CONTAINING DNA organism=Homo sapiens DNA sequence DC(K1):DG(L10) DT(K2):DA(L9) DG(K3):DC(L8) DA(K4):DT(L7) DC(K5):DG(L6) DG(K6):DC(L5) DT(K7):DA(L4) DG(K8):DC(L3) DC(K9):DG(L2) chainI ( 50) ARG109 0 5 2 0 0 0 0 0 0 ( 51) LYS110 0 1 0 0 0 0 0 0 0 (113) SER172 6 4 0 0 0 0 0 0 0 (117) ASN176 4 0 0 0 0 0 0 0 0 (248) PHE307 1 0 0 0 0 0 0 0 0 (252) LEU311 20 0 0 0 0 0 0 0 0 (255) ARG314 8 0 0 0 0 0 0 0 0 (256) LYS315 13 1 0 0 0 0 0 0 0 prot.sequence avleqfgfpltgtearcytnhalsydqakrvprwvlehiskskimgdadRKhckfkpdpnipptfsafnedyvgsgwsrghmapagnnkfsskamaetfylsnivpqdfdnnSgywNriemycrelterfedvwvvsgpltlpqtrgdgkkivsyqvigednvavpshlykvilarrssvsteplalgafvvpneaigfqpqltefqvslqdleklsglvffphldrtsdirnicsvdtcklldfqeFtlyLstRKiegarsvlrlekimenlknaeiepddyfmsryekkle >7r77_A:S-adenosyl-L-methionine-dependent_methyltransferases;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF DNMT5 BINARY COMPLEX WITH HEMIMETHYLATED DNA organism=? DNA sequence DC(D1):DG(B36) DC(D2):DG(B35) DA(D3):DT(B34) DT(D4):DA(B33) DG(D5):DC(B32) DC(D6):DG(B31) DG(D7):5CM(B30) DC(D8):DG(B29) DT(D9):DA(B28) DG(D10):DC(B27) DA(D11):DT(B26) DC(D12):DG(B25) chainA (269) CYS593 0 0 0 0 0 0 2 0 0 0 0 0 (272) ARG596 0 0 0 0 0 2 0 0 0 0 0 0 (314) ARG638 0 0 0 0 0 0 5 0 0 0 0 0 (344) GLN668 0 0 0 0 0 14 8 0 0 0 0 0 (345) ASN669 0 0 0 0 0 6 0 0 0 0 0 0 (348) ARG672 0 0 0 0 72 31 0 0 0 0 0 0 (350) THR674 0 0 0 1 0 0 0 0 0 0 0 0 (360) CYS684 0 0 0 0 0 5 0 0 0 0 0 0 (362) THR686 0 0 0 0 0 10 0 0 0 0 0 0 prot.sequence dikaavrnmsddlppisdieamfdhlvsripdivelvrqlngrklrvatmcsgtespllalnmiakaikaqhgltlafehvfsceiepfkqayiernftppilfrdvtelgkkrahtaygsmvdvpgdvdiliagtscvdyssgrtfrgmlqwvkkhqppivilenvcnapwdkvveyfgqidydaqytrldtkefyiphtrtrvylfatpsdlpekwaqtvkdlrrpwsspfeafllhtddpnihrarlelasaraqtsrkttdwnrcesRhqrarqdealgllrpltswqeagvckgldwtwndwllaqtervvdlleistlrmakdgidsgfkaciwnvsQNvdRqTgssktalapClTpnmipwvtirggpvtgrealalqgipvrellltsenedqladlagnamtttvvgsamiaalkvachkiteganpekeaalilekeavddeqvanriigedylehhdldlakvtksnlseildlacrssrhcqcegqsgtapnilecqecsyrackscggrpehvyapcanqrvepaefekrfkgllpmrvriagltdqclnavrkaaeksnkgsvndndwqlwstallegihdaefrfrylkrqstwtavyearramlslvlrnqipewrltikapasepnnsqlralllhpvarlqidiagqdvlcgpwelcipsmktidieitgkgellpswqaslglqgpfanttrwseveislqaedentldrklsgtyqllprcgqamsslhkkrpdlsddglpqlyffldptrcgesredryvfststerldygterpviarldshwregnekqrkvkldvsgawvkcpeahltairatfaipssasaisaslttegcshamallscrvpldpthsesmwrrgawaeidlshqgnttfanlawiterlppldglknwahiaddvsehvcercaprppkihwiktiiafedkleagqyehalkhrpspfvvqlrldqdigsfriglnivslahralsrlppttsehkislswrltpghvtespqprrvfilpsnkqdpensqfklplrkeqlrslwwmleqekatgkthtfveeeisesllpavgwraegkaerpvmvrggviadqvgygktvisialvaqtlslpapepatpglidlkatlivvpghlskqwpneiarftgsmfkviviqgmkdlqektiaelgkadiivmaseifesdvywsrleylsaqprewlhdtqggrffcdrldaameslvsqtkilkllpnpvlhmfrfrrviadeftylqkkslaavlrlsssyrwilsgtppvsdfaairsiatfmgihlgveddgegdvqyqkarakdqtqaekfhafrevhsrawhnrrdelaqeflnvfvrqniaeiediptvehihtfklpasegavylelehhlqalemqarketkfknvsqgdrnarleealsdsktaeeallkrcchftldlsdktqdaksaqeacdhitsararqllacqedlsrsvnqaialhgwikkkggfrqpfaewiafssniskhqgdieaarillkviekcgvkdgnippspsdkqspskmddvkwqlreqthllrklvkelvarvrslrffevvrkiqkgksdaqivlessecghkpstnpdiemailsccghvachkcmrkaaasqrcvksgecqaavrptnivkvsslgvegelssgrygaklehlvnlihsipknervlvflqwedlagkvsealsagriphvtlsgsaksrantldrfqadsarvlllkmndsnlttanhavflgplftnslfnyravetqaigrvrrygqqkkvhihrllaldtidmtifnarrtelkektdweeipqeeykg >7r8g_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF PSEUDOOCEANICOLA LIPOLYTICUS ARGONAUTE BOUND TO 5' OH GUIDE DNA organism=? DNA sequence DG(T17) DC(T16) DA(T15) DG(T14) DT(T13) DA(T10) DT(T2) DA(T3) DC(T4) DT(T5) DG(T6) DC(T7) DA(T8) DC(T9):DA(T10) chainA ( 41) ASN41 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 45) ARG45 0 0 0 7 0 0 0 0 0 0 0 0 0 0 ( 49) PHE49 0 0 0 7 0 0 0 0 0 0 0 0 0 0 ( 52) LYS52 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (116) PHE116 0 0 20 0 0 0 0 0 0 0 0 0 0 0 (119) GLN119 0 1 2 0 0 0 0 0 0 0 0 0 0 0 (120) GLN120 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (123) PHE123 8 37 0 0 0 0 0 0 0 0 0 0 0 0 (135) GLN135 0 0 0 0 0 5 0 0 0 0 0 0 0 5 (209) TYR209 51 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) HIS285 0 0 0 0 0 0 0 0 0 0 0 0 3 1 (293) GLN293 0 0 0 0 0 0 0 0 0 0 0 3 1 0 (297) ILE297 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (501) SER501 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (525) VAL525 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (530) TYR530 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (664) SER664 0 0 0 0 0 3 0 0 0 0 0 0 0 4 (711) LEU711 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (713) GLN713 0 0 0 0 0 0 0 0 0 5 6 0 0 0 (747) LYS747 0 0 0 0 0 0 0 6 7 0 0 0 0 0 prot.sequence mtlettlfpleglegltasyqlyavkglsgldeteyhknvNllvRrlsFsmKapfvalsrdgeqfiavpnyvtefpvdhrvvramvklvptgeplnlrfdaaddeydglrlryldFvlQQplFanhhlwqpgsgQpffhkkplkrlddvdlydgvsvraakhpeggfgivcdarskfithtpigaradrkrlgklinrsclykmgdhwYqfridavsdwkvgepsLfegnvpislaqQlvrtagnaapksiidldpeggaleyftstnerRMapaelcfliedtHgrraaklQrqtIlspserrarvngfirrylselniggaklsagarahafftethmppalsfgngtvlapdtskdrfqamqeyssmrrtmmldkkvgffhqdvfppqtlllpesvkkswgpafasdfvgtvqelypaggyrpeiieyrdkaygggvpgqmkallevaergeiksgdvlvmlhringapraqdklaamvcnefekrfgkrvqvihsdSpgrgykrifkndkptyvqqrgrgVnikgYlkgaalnkvclgnsrwpfvlrdplnadvtigidvknnmavftmvaeggrivrvqrsrsrqreqllesqvtqvitemlskelpeikkqvqrvvihrdgrawpaeiagarktfadmaesgliavdadvsvfevlkSspaplrlfsfeeptqenpkgvinpvlgswlklsendgyicttgaplLlQgtadplhvrkafgpmaiedalkdvfdlscltwpKpdscmrlpltiklcdialfdda >7r8h_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF PSEUDOOCEANICOLA LIPOLYTICUS ARGONAUTE BOUND TO 5' P GUIDE DNA organism=? DNA sequence DT(T1) DT(T2) DA(T3) DC(T4) DT(T5) DG(T6) DC(T7) DA(T8) DC(T9) DA(T10) DG(T11) DG(T12) DT(T13) DG(T14) DA(T15) DC(T16) DG(T17) DA(T18) chainA ( 41) ASN41 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 ( 44) VAL44 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 45) ARG45 0 0 0 0 0 0 0 0 0 0 0 16 0 16 0 0 0 0 ( 48) SER48 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 49) PHE49 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 ( 52) LYS52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 57) ALA57 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (112) ARG112 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (116) PHE116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 (120) GLN120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 (123) PHE123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 10 0 (133) SER133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (207) HIS207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (209) TYR209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 (212) ARG212 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (226) LEU226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (238) GLN238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (271) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 (272) MET272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (283) ASP283 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (285) HIS285 0 0 0 0 0 11 14 0 0 0 0 0 0 0 0 0 0 0 (293) GLN293 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 (297) ILE297 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (473) ARG473 0 0 0 0 0 0 5 12 0 0 0 0 0 0 0 0 0 0 (501) SER501 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (525) VAL525 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (530) TYR530 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (628) ARG628 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (711) LEU711 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (713) GLN713 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (747) LYS747 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mtlettlfplegtgacgasyqlyavkglsgldeteyhknvNllVRrlSFsmKapfvAlsrdgeqfiavpnyvtefpvdhrvvramvklvptgeplnlrfdaaddeydglrlRyldFvlqQplFanhhlwqpgSgqpffhkkplkrlddvdlydgvsvraakhpeggfgivcdarskfithtpigaradrkrlgklinrsclykmgdHwYqfRidavsdwkvgepsLfegnvpislaqQlvrtagnaapksiidldpeggaleyftstnerRMapaelcflieDtHgrraaklQrqtIlspserrarvngfirrylselniggaklsagarahafftethmppalsfgngtvlapdtskdrfqamqeyssmrrtmmldkkvgffhqdvfppqtlllpesvkkswgpafasdfvgtvqelypaggyrpeiieyrdkaygggvpgqmkallevaergeiksgdvlvmlhringapRaqdklaamvcnefekrfgkrvqvihsdSpgrgykrifkndkptyvqqrgrgVnikgYlkgaalnkvclgnsrwpfvlrdplnadvtigidvknnmavftmvaeggrivrvqrsrsrqreqllesqvtqvitemlskelpeikkqvqrvvihrdgRawpaeiagarktfadmaesgliavdadvsvfevlksspaplrlfsfeeptqenpkgvinpvlgswlklsendgyicttgaplLlQgtadplhvrkafgpmaiedalkdvfdlscltwpKpdscmrlpltiklcdialfdda >7r8i_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF PSEUDOOCEANICOLA LIPOLYTICUS ARGONAUTE BOUND TO 5' OH GUIDE DNA IN THE PRESENCE OF MG2+ organism=? DNA sequence DC(T15) DA(T14) DG(T13) DT(T12) DG(T11) DG(T10) DA(T9) DC(T8) DA(T7) DC(T6) DG(T5) DT(T4) DC(T3) DA(T2) DT(T0):DA(T2) DT(T1) chainA ( 45) ARG45 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) PHE49 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LYS52 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) PHE116 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) GLN120 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) PHE123 1 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) SER133 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (135) GLN135 0 0 0 0 17 1 0 0 0 0 0 0 0 0 0 0 (136) PRO136 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (156) SER156 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (158) ARG158 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (174) ARG174 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 (207) HIS207 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) TYR209 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) HIS285 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 (288) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (293) GLN293 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (294) ARG294 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (297) ILE297 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (472) PRO472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (525) VAL525 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (530) TYR530 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 (663) LYS663 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (664) SER664 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 (668) PRO668 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (712) LEU712 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (713) GLN713 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 (717) ASP717 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (747) LYS747 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 (750) SER750 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (753) ARG753 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence mtlettlfpleglegltasyqlyavkglsgldeteyhknvnllvRrlsFsmKapfvalsrdgeqfiavpnyvtefpvdhrvvramvklvptgeplnlrfdaaddeydglrlryldFvlqQplFanhhlwqpgSgQPffhkkplkrlddvdlydgvSvRaakhpeggfgivcdaRskfithtpigaradrkrlgklinrsclykmgdHwYqfridavsdwkvgepsLfegnvpislaqQlvrtagnaapksiidldpeggaleyftstnerRMapaelcfliedtHgrRaaklQRqtIlspserrarvngfirrylselniggaklsagarahafftethmppalsfgngtvlapdtskdrfqamqeyssmrrtmmldkkvgffhqdvfppqtlllpesvkkswgpafasdfvgtvqelypaggyrpeiieyrdkaygggvpgqmkallevaergeiksgdvlvmlhringaPraqdklaamvcnefekrfgkrvqvihsdspgrgykrifkndkptyvqqrgrgVnikgYlkgaalnkvclgnsrwpfvlrdplnadvtigidvknnmavftmvaeggrivrvqrsrsrqreqllesqvtqvitemlskelpeikkqvqrvvihrdgrawpaeiagarktfadmaesgliavdadvsvfevlKSspaPlrlfsfeeptqenpkgvinpvlgswlklsendgyicttgapllLQgtaDplhvrkafgpmaiedalkdvfdlscltwpKpdScmRlpltiklcdialfddaae >7r8j_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF PSEUDOOCEANICOLA LIPOLYTICUS ARGONAUTE BOUND TO 5' P GUIDE DNA IN THE PRESENCE OF MG2+ organism=? DNA sequence DT(T1) DT(T2) DA(T3) DC(T4) DT(T5) DG(T6) DC(T7) DA(T8) DG(T14) DA(T15) DC(T16) DG(T17) DA(T18) chainA ( 45) ARG45 0 0 0 0 0 0 0 0 19 0 0 0 0 ( 49) PHE49 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 52) LYS52 0 0 0 0 0 0 0 0 0 1 0 0 0 (116) PHE116 0 0 0 0 0 0 0 0 0 22 0 0 0 (119) GLN119 0 0 0 0 0 0 0 0 0 6 0 0 0 (120) GLN120 0 0 0 0 0 0 0 0 0 7 0 0 0 (123) PHE123 0 0 0 0 0 0 0 0 0 0 37 9 0 (133) SER133 0 0 0 0 0 0 0 0 0 1 0 0 0 (207) HIS207 0 0 0 0 0 0 0 0 0 0 0 1 0 (209) TYR209 0 0 0 0 0 0 0 0 0 0 0 50 0 (226) LEU226 0 0 0 0 0 0 0 0 0 0 0 0 11 (238) GLN238 0 0 0 0 0 0 0 0 0 0 0 0 6 (271) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 27 (272) MET272 0 0 0 0 0 0 0 0 0 0 0 0 5 (283) ASP283 0 0 0 0 0 0 1 0 0 0 0 0 0 (285) HIS285 0 0 0 0 0 12 20 0 0 0 0 0 0 (293) GLN293 0 0 0 0 0 11 3 0 0 0 0 0 0 (294) ARG294 0 0 0 0 3 0 0 0 0 0 0 0 0 (297) ILE297 0 0 0 0 3 0 0 0 0 0 0 0 0 (473) ARG473 0 0 0 0 0 0 0 7 0 0 0 0 0 (501) SER501 2 0 0 0 0 0 0 0 0 0 0 0 0 (525) VAL525 2 0 0 0 0 0 0 0 0 0 0 0 0 (530) TYR530 9 0 0 0 0 0 0 0 0 0 0 0 0 (713) GLN713 0 0 0 3 6 0 0 0 0 0 0 0 0 (747) LYS747 0 5 3 0 0 0 0 0 0 0 0 0 0 prot.sequence mtlettlfplegtgacgasyqlyavkglsgldeteyhknvnllvRrlsFsmKapfvalsrdgeqfiavpnyvtefpvdhrvvramvklvptgeplnlrfdaaddeydglrlryldFvlQQplFanhhlwqpgSgqpffhkkplkrlddvdlydgvsvraakhpeggfgivcdarskfithtpigaradrkrlgklinrsclykmgdHwYqfridavsdwkvgepsLfegnvpislaqQlvrtagnaapksiidldpeggaleyftstnerRMapaelcflieDtHgrraaklQRqtIlspserrarvngfirrylselniggaklsagarahafftethmppalsfgngtvlapdtskdrfqamqeyssmrrtmmldkkvgffhqdvfppqtlllpesvkkswgpafasdfvgtvqelypaggyrpeiieyrdkaygggvpgqmkallevaergeiksgdvlvmlhringapRaqdklaamvcnefekrfgkrvqvihsdSpgrgykrifkndkptyvqqrgrgVnikgYlkgaalnkvclgnsrwpfvlrdplnadvtigidvknnmavftmvaeggrivrvqrsrsrqreqllesqvtqvitemlskelpeikkqvqrvvihrdgrawpaeiagarktfadmaesgliavdadvsvfevlksspaplrlfsfeeptqenpkgvinpvlgswlklsendgyicttgaplllQgtadplhvrkafgpmaiedalkdvfdlscltwpKpdscmrlpltiklcdia >7ray_A:DNA-binding_domain; title=CRYSTAL STRUCTURE OF MBD2 WITH DNA organism=HOMO SAPIENS DNA sequence DG(B1):DC(C12) DC(B2):DG(C11) DC(B3):DG(C10) DA(B4):DT(C9) DA(B5):DT(C8) 5CM(B6):DG(C7) DG(B7):5CM(C6) DT(B8):DA(C5) DT(B9):DA(C4) DG(B10):DC(C3) DG(B11):DC(C2) DC(B12):DG(C1) chainA ( 25) ARG166 0 0 0 0 0 10 15 0 0 0 0 0 ( 35) GLU176 0 0 0 0 0 1 2 0 0 0 0 0 ( 37) TYR178 0 0 0 0 0 0 1 0 0 0 0 0 ( 45) LYS186 0 0 0 0 0 0 0 0 1 0 0 0 ( 47) ARG188 0 0 0 0 0 17 13 3 0 0 0 0 prot.sequence gatesgkrmdcpalppgwkkeeviRksglsagksEvyyfspsgkKfRskpqlarylgntvdlssfdfrtgkmmp >7rbe_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA CROSSLINKED BINARY COMPLEX - A organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 37 ( 26) LYS35 0 0 0 0 7 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftskllhqvveqlqkvhfitdtlskgetkfmgvcqlpskeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrs >7rbf_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA CROSSLINKED BINARY COMPLEX - B organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 37 0 0 0 0 ( 29) LYS35 8 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrs >7rbg_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA CROSSLINKED TERNARY COMPLEX 1 organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 26) HIS34 29 0 0 0 0 ( 27) LYS35 5 0 0 0 0 ( 30) ALA38 5 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7rbh_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA CROSSLINKED TERNARY COMPLEX 2 organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 25) HIS34 0 0 0 0 37 ( 26) LYS35 0 0 0 0 6 ( 29) ALA38 0 0 0 0 5 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7rbi_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA CROSSLINKED COMPLEX, 20 S CA TO MG EXCHANGE organism=HOMO SAPIENS DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) DC(P11):DG(T6) chainA (222) LYS234 0 0 0 0 0 0 0 6 0 0 0 (257) TYR271 0 0 0 0 0 0 0 0 0 12 6 (262) ASP276 0 0 0 0 0 0 0 0 0 0 7 (265) ASN279 0 0 0 0 0 0 0 0 0 0 9 (266) LYS280 0 0 0 0 0 0 0 0 0 0 5 (269) ARG283 0 0 0 0 0 0 0 0 0 4 13 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpsknkeyphrridiRlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7rbj_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA CROSSLINKED COMPLEX, 30 S CA TO MG EXCHANGE organism=HOMO SAPIENS DNA sequence DG(T6):DC(P11) DG(T7):DC(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 0 0 5 0 0 0 0 0 0 0 (262) TYR271 7 9 0 0 0 0 0 0 0 0 0 (267) ASP276 7 0 0 0 0 0 0 0 0 0 0 (270) ASN279 8 0 0 0 0 0 0 0 0 0 0 (271) LYS280 12 0 0 0 0 0 0 0 0 0 0 (274) ARG283 13 4 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7rbk_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA CROSSLINKED COMPLEX, 40 S CA TO MG EXCHANGE organism=HOMO SAPIENS DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) DC(P11):DG(T6) chainA (225) LYS234 0 0 0 0 0 0 0 6 0 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 9 6 (267) ASP276 0 0 0 0 0 0 0 0 0 0 10 (270) ASN279 0 0 0 0 0 0 0 0 0 0 7 (271) LYS280 0 0 0 0 0 0 0 0 0 0 21 (274) ARG283 0 0 0 0 0 0 0 0 0 3 13 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7rbl_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA CROSSLINKED COMPLEX, 60 S CA TO MG EXCHANGE organism=HOMO SAPIENS DNA sequence DG(P1):DC(T16) DC(P2):DG(T15) DT(P3):DA(T14) DG(P4):DC(T13) DA(P5):DT(T12) DT(P6):DA(T11) DG(P7):DC(T10) DC(P8):DG(T9) DG(P9):DC(T8) DC(P10):DG(T7) DC(P11):DG(T6) chainA (225) LYS234 0 0 0 0 0 0 0 5 0 0 0 (262) TYR271 0 0 0 0 0 0 0 0 0 9 8 (267) ASP276 0 0 0 0 0 0 0 0 0 0 7 (270) ASN279 0 0 0 0 0 0 0 0 0 0 8 (271) LYS280 0 0 0 0 0 0 0 0 0 0 19 (274) ARG283 0 0 0 0 0 0 0 0 0 3 12 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7rbm_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA CROSSLINKED COMPLEX, 60 S CA TO MN EXCHANGE organism=HOMO SAPIENS DNA sequence DG(T6):DC(P11) DG(T7):DC(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 0 0 6 0 0 0 0 0 0 0 (258) TYR271 6 9 0 0 0 0 0 0 0 0 0 (263) ASP276 7 0 0 0 0 0 0 0 0 0 0 (266) ASN279 9 0 0 0 0 0 0 0 0 0 0 (267) LYS280 10 0 0 0 0 0 0 0 0 0 0 (270) ARG283 12 4 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkyNayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskeyphrridirlipkdqyycgvlYftgsDifNKnmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrsehhh >7rbn_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA CROSSLINKED COMPLEX, 20 MIN CA TO MG EXCHANGE organism=HOMO SAPIENS DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 25) HIS34 43 0 0 0 0 ( 26) LYS35 7 0 0 0 0 ( 29) ALA38 1 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdr >7rbo_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=HUMAN DNA POLYMERASE BETA CROSSLINKED COMPLEX, 60 MIN CA TO MG EXCHANGE organism=HOMO SAPIENS DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 24) HIS34 0 0 0 0 42 ( 25) LYS35 0 0 0 0 6 ( 28) ALA38 0 0 0 0 4 prot.sequence lnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdr >7rcc_D:Homing_endonucleases; title=FIRST STAGE ENGINEERED VARIANT OF I-ONUI AFTER INITIAL REASSEMBLY organism=SYNTHETIC CONSTRUCT DNA sequence DC(C2):DG(B24) DG(C3):DC(B23) DC(C4):DG(B22) DG(C5):DC(B21) DC(C6):DG(B20) DC(C7):DG(B19) DT(C8):DA(B18) DG(C9):DC(B17) DT(C10):DA(B16) DG(C11):DC(B15) DG(C12):DC(B14) DG(C13):DC(B13) DA(C14):DT(B12) DT(C15):DA(B11) DC(C16):DG(B10) DT(C17):DA(B9) DG(C18):DC(B8) DC(C19):DG(B7) DA(C20):DT(B6) DT(C21):DA(B5) DG(C22):DC(B4) DC(C23):DG(B3) DC(C24):DG(B2) DC(C25):DG(B1) DC(C26):DG(B0) chainD ( 21) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 29) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 14 1 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 0 0 0 0 ( 38) ALA46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 40) VAL48 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 2 0 0 0 0 0 0 0 0 0 ( 64) ASP72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 ( 68) TYR76 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 ( 72) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 10 0 0 0 0 0 0 ( 74) THR82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (132) TRP140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (171) SER180 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) PHE182 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG184 0 0 0 0 0 10 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG186 0 0 0 9 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ARG195 0 0 18 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) GLN197 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) GLU201 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) SER203 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) TYR225 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) ARG232 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) TRP234 0 0 0 0 0 0 0 0 10 6 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) GLN236 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG238 0 0 0 0 0 3 15 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) GLU240 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssrresinpwiltgfadaegSfglsilnRryhtRlsfAiVlhnkdksileniqstwkvgiitnDgdrYvRlRvTrfedlkviidhfekyplvtqklgdyklfkqafsvmenkehlkengikelvrikakmnWglndelkkafpeiskerplinknipnfkwlagftsgdgSfFvRlRvRvQlvfEiSqhirdknlmnslitylgcghiYegnkseRsWlQfRvEkfsdindkiipvfqentligvkledfedwckvaklieekkldeikkiklnmnkgr >7rcd_A:Homing_endonucleases; title=SECOND STAGE REENGINEERED VARIANT OF I-ONUI TARGETING HUMAN PD1 GENE WITH ACTIVITY ENHANCING SUBSTITUTIONS organism=SYNTHETIC CONSTRUCT DNA sequence DG(B0):DC(C26) DG(B1):DC(C25) DG(B2):DC(C24) DG(B3):DC(C23) DC(B4):DG(C22) DA(B5):DT(C21) DT(B6):DA(C20) DG(B7):DC(C19) DC(B8):DG(C18) DA(B9):DT(C17) DG(B10):DC(C16) DA(B11):DT(C15) DT(B12):DA(C14) DC(B13):DG(C13) DC(B14):DG(C12) DC(B15):DG(C11) DA(B16):DT(C10) DC(B17):DG(C9) DA(B18):DT(C8) DG(B19):DC(C7) DG(B20):DC(C6) DC(B21):DG(C5) DG(B22):DC(C4) DC(B23):DG(C3) DG(B24):DC(C2) chainA ( 18) SER24 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG42 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) THR46 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) MET48 0 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ASN72 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR76 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG80 0 0 0 0 0 0 15 15 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) THR82 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) TRP140 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) SER180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (170) PHE182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 (172) ARG184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 7 0 0 0 0 0 (174) ARG186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 6 0 0 0 (183) ARG195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 (185) GLN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (189) GLU201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 (191) SER203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (213) TYR225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 (220) ARG232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (222) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 5 7 0 0 0 0 0 0 0 0 (224) GLN236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 (226) ARG238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 3 0 0 0 0 0 (228) GLU240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 prot.sequence resinpwiltgfadaegSfglsilnaryhtRlsfTiMlhnkdksileniqstwkvgiitnNgdhYvtlRvTrfedlkviidhfekyplvtqklgdyklfkqafsvmenkehlkengikelvrikakmnWglndelkkafpeniserplinknipnfkwlagftsgdgSfFvRlRksnvnarvRvQlvfEiSqhirdknlmnslitylgcghiYegnkseRsWlQfRvEkfsdindkiipvfqentligvkledfedwckvaklieekkhltesgldeikkiklnmnk >7rce_A:Homing_endonucleases; title=THIRD STAGE REENGINEERED VARIANT OF I-ONUI WITH SPECIFICITY ENHANCING SUBSTITUTIONS organism=SYNTHETIC CONSTRUCT DNA sequence DG(B0):DC(C26) DG(B1):DC(C25) DG(B2):DC(C24) DG(B3):DC(C23) DC(B4):DG(C22) DA(B5):DT(C21) DT(B6):DA(C20) DG(B7):DC(C19) DC(B8):DG(C18) DA(B9):DT(C17) DG(B10):DC(C16) DA(B11):DT(C15) DT(B12):DA(C14) DC(B13):DG(C13) DC(B14):DG(C12) DC(B15):DG(C11) DA(B16):DT(C10) DC(B17):DG(C9) DA(B18):DT(C8) DG(B19):DC(C7) DG(B20):DC(C6) DC(B21):DG(C5) DG(B22):DC(C4) DC(B23):DG(C3) DG(B24):DC(C2) chainA ( 19) SER24 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) SER28 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LEU30 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) HIS40 0 0 0 6 4 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 2 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) THR46 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) MET48 0 0 0 0 0 0 0 0 0 4 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ASN72 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) TYR76 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) VAL80 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) TYR82 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) TRP140 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) SER180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (173) PHE182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 (175) ARG184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 13 0 0 0 0 0 (177) ARG186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 11 6 0 0 0 (181) GLN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (185) GLU201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 (187) SER203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (209) TYR225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 (216) ARG232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (218) TRP234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 5 12 0 0 0 0 0 0 0 0 (220) GLN236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 (222) ARG238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 5 0 0 0 0 0 (224) GLU240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 0 0 prot.sequence rresinpwiltgfadaegSfglSiLnraryHtRlsfTiMlhnkdksileniqstwkvgsilnNgdhYvslVvYrfedlkviidhfekyplitqklgdyklfkqafsvmenkehlkengikelvrikakmnWglndelkkafpeniskerplinknipnfkwlagftsgdgSfFvRlRvrvQlvfEiSqhirdknlmnslitylgcghiYegnkseRsWlQfRvEkfsdindkiipvfqentligvkledfedwckvaklieekkhltesgldeikkiklnmnkgr >7rcf_A:Homing_endonucleases; title=FOURTH STAGE REENGINEERED VARIANT OF I-ONUI WITH STABILITY ENHANCING SUBSTITUTIONS organism=SYNTHETIC CONSTRUCT DNA sequence DC(C2):DG(B24) DG(C3):DC(B23) DC(C4):DG(B22) DG(C5):DC(B21) DC(C6):DG(B20) DC(C7):DG(B19) DT(C8):DA(B18) DG(C9):DC(B17) DT(C10):DA(B16) DG(C11):DC(B15) DG(C12):DC(B14) DG(C13):DC(B13) DA(C14):DT(B12) DT(C15):DA(B11) DC(C16):DG(B10) DT(C17):DA(B9) DG(C18):DC(B8) DC(C19):DG(B7) DA(C20):DT(B6) DT(C21):DA(B5) DG(C22):DC(B4) DC(C23):DG(B3) DC(C24):DG(B2) DC(C25):DG(B1) DC(C26):DG(B0) chainA ( 18) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 22) SER28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 24) LEU30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 26) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 ( 29) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 2 1 0 0 0 ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 2 0 0 0 0 0 ( 35) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 37) MET48 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 0 0 0 0 ( 59) LEU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 61) ASN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 65) TYR76 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 ( 71) TYR82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 (129) TRP140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (169) SER180 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) PHE182 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG184 0 0 0 0 0 11 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG186 0 0 0 8 13 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ARG195 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) GLN197 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) GLU201 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) SER203 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) TYR225 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ARG232 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) TRP234 0 0 0 0 0 0 0 0 7 5 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) GLN236 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) ARG238 0 0 0 0 0 4 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) GLU240 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence resinpwtltgfadaegSfglSiLnRryHtRlsfTiMlhnkdksileniqstwkvgsiLnNgdhYvslvvYrfedlkviidhfekyplitqklgdyklfkqafsvmenkehlkengikelvrikakmnWglndelkkafpevisrerplinknipngkwlagftsgdgSfFvRlRksnvnarvRvQlvfEiSqhirdknlmnslitylgcghiYegnkseRsWlQfRvEkfsdindkiipvfqentligmkledfedwckvaklieekkhltesgldeikkiklnmnkrr >7rcg_A:Homing_endonucleases; title=I-ONUI_E-HPD1-F FINAL STAGE REENGINEERED VARIANT OF I-ONUI organism=SYNTHETIC CONSTRUCT DNA sequence DC(C2):DG(B24) DG(C3):DC(B23) DC(C4):DG(B22) DG(C5):DC(B21) DC(C6):DG(B20) DC(C7):DG(B19) DT(C8):DA(B18) DG(C9):DC(B17) DT(C10):DA(B16) DG(C11):DC(B15) DG(C12):DC(B14) DG(C13):DC(B13) DA(C14):DT(B12) DT(C15):DA(B11) DC(C16):DG(B10) DT(C17):DA(B9) DG(C18):DC(B8) DC(C19):DG(B7) DA(C20):DT(B6) DT(C21):DA(B5) DG(C22):DC(B4) DC(C23):DG(B3) DC(C24):DG(B2) DC(C25):DG(B1) DC(C26):DG(B0) chainA ( 19) SER24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 23) SER28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 27) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 10 0 0 ( 34) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 5 3 0 0 0 ( 36) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 2 0 0 0 0 0 ( 40) THR46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 42) MET48 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 4 0 0 0 0 0 0 0 0 0 ( 64) LEU70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 66) ASN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 70) TYR76 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 ( 76) TYR82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 (134) TRP140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (174) SER180 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) PHE182 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ARG184 0 0 0 0 0 9 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ARG186 0 0 0 6 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG195 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) GLU201 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) SER203 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) TYR225 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) ARG232 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) TRP234 0 0 0 0 0 0 0 0 12 7 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) GLN236 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) ARG238 0 0 0 0 0 3 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) GLU240 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rresinpwtltgfadaegSfglSilnRrgtaryHtRlsfTiMlhnkdksileniqstwkvgsiLnNgdhYvslvvYafedlkviidhfekyplitqklgdyklfkqafsvmenkehlkengikelvrikakmnWglndelkkafpevisrerplinknipngkwlagftsgdgSfFvRlRksrvRvqlvfEiSqhirdknlmnslitylgcghiYegnkRsWlQfRvEkfsdindkiipvfqentligmkledfedwckvaklieekkhltesgldeikkiklnmnk >7rcu_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=SYNTHETIC MAX HOMODIMER MIMIC IN COMPLEX WITH DNA organism=? DNA sequence DA(C100):DT(D128) DG(C101):DC(D127) DT(C102):DA(D126) DA(C103):DT(D125) DG(C104):DC(D124) DC(C105):DG(D123) DA(C106):DT(D122) DC(C107):DG(D121) DG(C108):DC(D120) DT(C109):DA(D119) DG(C110):DC(D118) DC(C111):DG(D117) DT(C112):DA(D116) DA(C113):DT(D115) DC(C114):DG(D114) DT(C115):DA(D201) chainA ( 5) HIS18 0 0 0 0 0 0 0 0 0 3 7 2 0 0 0 0 ( 6) ASN19 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 9) GLU22 0 0 0 0 0 0 0 0 0 6 8 1 0 0 0 0 ( 12) ARG25 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 13) ARG26 0 0 0 0 0 0 0 12 8 1 0 0 0 0 0 0 chainB ( 4) HIS18 0 0 0 0 4 12 4 0 0 0 0 0 0 0 0 0 ( 5) ASN19 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 8) GLU22 0 0 0 0 1 7 7 0 0 0 0 0 0 0 0 0 ( 11) ARG25 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 12) ARG26 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 0 prot.sequence krahHNalErkRRdhikdsfhklrdsvp/rahHNalErkRRdhikdsfhklrdsvp >7rcu_E:HLH,_helix-loop-helix_DNA-binding_domain; title=SYNTHETIC MAX HOMODIMER MIMIC IN COMPLEX WITH DNA organism=? DNA sequence DA(G100):DT(H128) DG(G101):DC(H127) DT(G102):DA(H126) DA(G103):DT(H125) DG(G104):DC(H124) DC(G105):DG(H123) DA(G106):DT(H122) DC(G107):DG(H121) DG(G108):DC(H120) DT(G109):DA(H119) DG(G110):DC(H118) DC(G111):DG(H117) DT(G112):DA(H116) DA(G113):DT(H115) DC(G114):DG(H114) DT(G115):DA(H113) chainE ( 4) HIS18 0 0 0 0 0 0 0 0 0 6 11 5 0 0 0 0 ( 5) ASN19 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 8) GLU22 0 0 0 0 0 0 0 0 2 10 8 1 0 0 0 0 ( 11) ARG25 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 ( 12) ARG26 0 0 0 0 0 0 0 18 12 1 0 0 0 0 0 0 prot.sequence rahHNalErkRRdhikdsfhklrdsvp >7rcu_EF:HLH,_helix-loop-helix_DNA-binding_domain; title=SYNTHETIC MAX HOMODIMER MIMIC IN COMPLEX WITH DNA organism=? DNA sequence DA(H113):DT(G115) DG(H114):DC(G114) DT(H115):DA(G113) DA(H116):DT(G112) DG(H117):DC(G111) DC(H118):DG(G110) DA(H119):DT(G109) DC(H120):DG(G108) DG(H121):DC(G107) DT(H122):DA(G106) DG(H123):DC(G105) DC(H124):DG(G104) DT(H125):DA(G103) DA(H126):DT(G102) DC(H127):DG(G101) DT(H128):DA(G100) chainE ( 4) HIS18 0 0 0 0 5 11 6 0 0 0 0 0 0 0 0 0 ( 5) ASN19 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 8) GLU22 0 0 0 0 1 8 10 2 0 0 0 0 0 0 0 0 ( 11) ARG25 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 12) ARG26 0 0 0 0 0 0 1 12 18 0 0 0 0 0 0 0 chainF ( 4) HIS18 0 0 0 0 0 0 0 0 0 2 9 2 0 0 0 0 ( 5) ASN19 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 8) GLU22 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 ( 11) ARG25 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 12) ARG26 0 0 0 0 0 0 0 11 8 1 0 0 0 0 0 0 prot.sequence rahHNalErkRRdhikdsfhklrdsvp/rahHNalErkRRdhikdsfhklrdsvp >7rcu_IJ:HLH,_helix-loop-helix_DNA-binding_domain; title=SYNTHETIC MAX HOMODIMER MIMIC IN COMPLEX WITH DNA organism=? DNA sequence DG(L114):DC(K114) DT(L115):DA(K113) DA(L116):DT(K112) DG(L117):DC(K111) DC(L118):DG(K110) DA(L119):DT(K109) DC(L120):DG(K108) DG(L121):DC(K107) DT(L122):DA(K106) DG(L123):DC(K105) DC(L124):DG(K104) DT(L125):DA(K103) DA(L126):DT(K102) DC(L127):DG(K101) DT(L128):DA(K100) chainI ( 4) HIS18 0 0 0 2 7 2 0 0 0 0 0 0 0 0 0 ( 5) ASN19 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 8) GLU22 0 0 0 1 10 6 0 0 0 0 0 0 0 0 0 ( 11) ARG25 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 ( 12) ARG26 0 0 0 0 0 1 10 12 0 0 0 0 0 0 0 chainJ ( 5) HIS18 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 ( 6) ASN19 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 9) GLU22 0 0 0 0 0 0 0 0 5 10 2 0 0 0 0 ( 12) ARG25 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 13) ARG26 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 prot.sequence rahHNalErkRRdhikdsfhklrdsvp/krahHNalErkRRdhikdsfhklrdsvp >7rcu_MN:HLH,_helix-loop-helix_DNA-binding_domain; title=SYNTHETIC MAX HOMODIMER MIMIC IN COMPLEX WITH DNA organism=? DNA sequence DA(O100):DT(P128) DG(O101):DC(P127) DT(O102):DA(P126) DA(O103):DT(P125) DG(O104):DC(P124) DC(O105):DG(P123) DA(O106):DT(P122) DC(O107):DG(P121) DG(O108):DC(P120) DT(O109):DA(P119) DG(O110):DC(P118) DC(O111):DG(P117) DT(O112):DA(P116) DA(O113):DT(P115) DC(O114):DG(P114) chainM ( 4) HIS18 0 0 0 0 0 0 0 0 0 2 13 3 0 0 0 ( 5) ASN19 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 8) GLU22 0 0 0 0 0 0 0 0 0 7 8 1 0 0 0 ( 11) ARG25 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 ( 12) ARG26 0 0 0 0 0 0 0 13 8 0 0 0 0 0 0 chainN ( 5) HIS18 0 0 0 0 4 10 3 0 0 0 0 0 0 0 0 ( 6) ASN19 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 9) GLU22 0 0 0 0 1 5 9 0 0 0 0 0 0 0 0 ( 12) ARG25 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 ( 13) ARG26 0 0 0 0 0 0 2 7 10 0 0 0 0 0 0 prot.sequence rahHNalErkRRdhikdsfhklrdsvp/krahHNalErkRRdhikdsfhklrdsvp >7rdq_CDF: title=CRYO-EM STRUCTURE OF THERMUS THERMOPHILUS REITERATIVE TRANSCRIPTION COMPLEX WITH 11NT OLIGO-G RNA organism=THERMUS THERMOPHILUS HB8 DNA sequence DG(H1):DC(G33) DT(H2):DA(G32) DG(H3):DC(G31) DT(H4):DA(G30) DG(H5):DC(G29) DC(H6):DG(G28) DT(H7):DA(G27) DA(H8):DA(G26) DT(H9):DT(G25) DA(H10):DA(G24) DA(H11):DA(G23) DT(H12):DT(G22) DG(H13):DG(G21) DG(H14):DG(G20) DG(H15):DG(G19) DA(H16):DA(G18) DG(H17):DG(G17) DC(H18):DT(G16) DT(H19):DC(G15) DG(H20):DC(G14) DG(H21):DC(G13) DC(H22):DG(G12) DA(H23):DT(G11) DC(H24):DG(G10) DG(H25):DC(G9) DG(H26):DC(G8) DA(H27):DT(G7) DT(H28):DA(G6) DG(H29):DC(G5) DC(H30):DG(G4) DA(H31):DT(G3) chainC (135) ARG142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (159) PRO166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (160) LYS167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) PRO170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 (164) TRP171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 (180) ASN187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (236) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ILE325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (319) ASP326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (343) ARG350 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (350) GLU357 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (354) MET361 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) PRO377 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) LEU418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (415) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 (419) ASP426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (420) VAL427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 chainD (475) SER596 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (584) ALA705 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (585) PRO706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (967) THR1088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 (968) ALA1089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainF ( 5) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) VAL81 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) HIS86 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU93 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU99 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ASN191 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ARG193 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) LEU194 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) LYS201 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG205 0 0 0 0 0 0 0 1 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) PHE209 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) PHE227 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) GLU228 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) ARG231 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PHE233 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) LYS234 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) SER236 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) THR237 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) TYR238 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) THR240 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) TRP241 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) TRP242 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) GLN245 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ASN248 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG249 0 0 0 2 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) VAL262 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) HIS263 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) ASN269 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 6 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) GLU324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) TYR329 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieelvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihRspgvyftpdparpgryiasiiplPKrgPWidlevepngvvsmkvNkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllRpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddIDhlgnrrirtvgelmtdqfrvglaRlargvrErmlMgsedsltpaklvnsrPleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggLtreRagfDVrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglask/kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfprrvrveyvkkewtepkdyrvqphmnvvvpegarveagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgSdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqlttqglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkea/istsDpVRqyLHeigqvpLltleeEvelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieaNlRLvvsiakKytgRglsFldliqegnqgliravekFEykRrFKfSTYaTWWirQaiNRaiadqartiripVHmvetiNklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdEkdsfYgdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >7rdq_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF THERMUS THERMOPHILUS REITERATIVE TRANSCRIPTION COMPLEX WITH 11NT OLIGO-G RNA organism=? DNA sequence DG(H1):DC(G33) DT(H2):DA(G32) DG(H3):DC(G31) DT(H4):DA(G30) DG(H5):DC(G29) DC(H6):DG(G28) DT(H7):DA(G27) DA(H8):DA(G26) DT(H9):DT(G25) DA(H10):DA(G24) DA(H11):DA(G23) DT(H12):DT(G22) DG(H13):DG(G21) DG(H14):DG(G20) DG(H15):DG(G19) DA(H16):DA(G18) DG(H17):DG(G17) DC(H18):DT(G16) DT(H19):DC(G15) DG(H20):DC(G14) DG(H21):DC(G13) DC(H22):DG(G12) DA(H23):DT(G11) DC(H24):DG(G10) DG(H25):DC(G9) DG(H26):DC(G8) DA(H27):DT(G7) DT(H28):DA(G6) DG(H29):DC(G5) DC(H30):DG(G4) DA(H31):DT(G3) chainF ( 5) ASP79 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) VAL81 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG82 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) HIS86 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU93 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU99 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ASN191 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ARG193 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) LEU194 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) LYS201 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG205 0 0 0 0 0 0 0 1 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) PHE209 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) PHE227 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) GLU228 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) ARG231 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) PHE233 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) LYS234 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) SER236 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) THR237 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) TYR238 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) THR240 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) TRP241 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) TRP242 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) GLN245 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ASN248 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG249 0 0 0 2 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) VAL262 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (189) HIS263 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) ASN269 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) ILE321 0 0 0 0 0 0 0 0 0 0 0 0 6 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) GLU324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) TYR329 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence istsDpVRqyLHeigqvpLltleeEvelarkveegmeaikklseitgldpdlirevvrakilgsarvrhipglketldpktveeidqklkslpkehkrylhiaregeaarqhlieaNlRLvvsiakKytgRglsFldliqegnqgliravekFEykRrFKfSTYaTWWirQaiNRaiadqartiripVHmvetiNklsrtarqlqqelgreptyeeiaeamgpgwdakrveetlkiaqepvsletpIgdEkdsfYgdfipdehlpspvdaatqsllseelekalsklsereamvlklrkglidgrehtleevgaffgvtrerirqienkalrklkyhesrtrklrdfld >7rfk_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR SINEFUNGIN organism=Clostridioides difficile DNA sequence DT(e1):DA(d14) DG(e2):DC(d13) DG(e3):DC(d12) DG(e4):DC(d11) DA(e5):DT(d10) DC(e6):DG(d9) DT(e7):DA(d8) DT(e8):DA(d7) DT(e9):DA(d6) DT(e10):DA(d5) DT(e11):DA(d4) DG(e12):DC(d3) DA(e13):DT(d2) DT(e14):DT(d1) chainA ( 25) TYR30 0 0 0 0 0 0 22 0 0 0 0 0 0 0 (156) ASN165 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (159) TYR168 0 0 0 0 0 0 51 0 0 0 0 0 0 0 (162) HIS171 0 0 0 0 0 0 0 0 7 8 0 0 0 0 (163) LYS172 0 0 0 0 0 0 0 4 9 6 0 0 0 0 (183) ASP192 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (184) LYS193 0 0 0 0 0 0 0 0 0 5 4 6 0 0 (212) TYR221 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (244) PHE253 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (246) ASN255 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (247) ILE256 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (249) VAL258 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (337) GLN346 0 0 0 0 0 0 0 0 1 11 9 0 0 0 (340) ILE349 0 0 0 0 0 0 0 0 10 4 1 0 0 0 (370) SER379 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (416) ARG425 0 0 0 0 0 0 0 0 0 0 17 11 4 0 (417) GLU426 0 0 0 0 0 0 0 0 0 0 1 0 1 0 (422) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 2 1 (429) GLN438 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (430) TRP439 0 0 0 0 0 0 0 0 0 4 11 14 12 0 (432) ARG441 0 0 0 0 0 0 0 0 0 0 10 2 0 0 (446) TYR455 0 0 0 0 0 0 13 5 0 0 0 0 0 0 (447) LYS456 0 0 0 0 0 0 8 11 0 0 0 0 0 0 (463) SER472 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (464) ALA473 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (465) ASP474 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (467) TYR476 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (504) MET513 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (505) SER514 0 0 0 0 0 5 0 6 0 0 0 0 0 0 (508) ILE517 0 0 0 0 0 4 4 3 0 0 0 0 0 0 (512) TYR521 0 0 0 0 0 0 0 0 8 2 0 0 0 0 chainB (429) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence qdnfllskeyensldvdtkkasgiYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/disqdnfllskeyensldvdtkkasgiyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >7rfl_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR SGC0946 organism=Clostridioides difficile DNA sequence DT(d16):DA(e27) DG(d17):DC(e26) DG(d18):DC(e25) DG(d19):DC(e24) DA(d20):DT(e23) DC(d21):DG(e22) DT(d22):DA(e21) DT(d23):DA(e20) DT(d24):DA(e19) DT(d25):DA(e18) DT(d26):DA(e17) DG(d27):DC(e16) DA(d28):DT(e15) chainA chainB ( 9) TYR30 0 0 0 0 0 0 12 0 0 0 0 0 0 (144) ASN165 0 0 0 0 0 0 10 0 0 0 0 0 0 (147) TYR168 0 0 0 0 0 0 50 0 0 0 0 0 0 (150) HIS171 0 0 0 0 0 0 0 0 7 8 1 0 0 (151) LYS172 0 0 0 0 0 0 0 4 9 5 0 0 0 (171) ASP192 0 0 0 0 0 0 0 0 0 0 0 1 0 (172) LYS193 0 0 0 0 0 0 0 0 0 7 5 7 0 (200) TYR221 0 0 0 0 0 0 0 3 0 0 0 0 0 (232) PHE253 0 0 0 0 0 0 9 0 0 0 0 0 0 (235) ILE256 0 0 0 0 0 0 1 0 0 0 0 0 0 (237) VAL258 0 0 0 0 0 0 1 0 0 0 0 0 0 (325) GLN346 0 0 0 0 0 0 0 0 1 10 10 0 0 (328) ILE349 0 0 0 0 0 0 0 0 10 4 1 0 0 (358) SER379 0 0 0 0 0 0 2 0 0 0 0 0 0 (404) ARG425 0 0 0 0 0 0 0 0 0 0 17 13 3 (405) GLU426 0 0 0 0 0 0 0 0 0 0 1 0 0 (410) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 1 (417) GLN438 0 0 0 0 0 0 0 0 0 3 1 0 0 (418) TRP439 0 0 0 0 0 0 0 0 0 4 10 15 13 (420) ARG441 0 0 0 0 0 0 0 0 0 0 10 2 0 (434) TYR455 0 0 0 0 0 0 14 4 0 0 0 0 0 (435) LYS456 0 0 0 0 0 0 8 11 0 0 0 0 0 (451) SER472 0 0 0 0 0 0 0 0 1 0 0 0 0 (452) ALA473 0 0 0 0 0 0 0 0 4 0 0 0 0 (453) ASP474 0 0 0 0 0 0 0 1 0 0 0 0 0 (455) TYR476 0 0 0 0 0 0 0 0 0 2 0 0 0 (492) MET513 0 0 0 0 0 0 0 8 0 0 0 0 0 (493) SER514 0 0 0 0 0 5 0 6 0 0 0 0 0 (496) ILE517 0 0 0 0 0 2 3 3 0 0 0 0 0 (500) TYR521 0 0 0 0 0 0 0 0 8 2 0 0 0 prot.sequence dtkkasgiyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvdesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgirkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/dtkkasgiYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFknIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >7rfm_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR EPZ004777 organism=Clostridioides difficile DNA sequence DT(d16):DA(e27) DG(d17):DC(e26) DG(d18):DC(e25) DG(d19):DC(e24) DA(d20):DT(e23) DC(d21):DG(e22) DT(d22):DA(e21) DT(d23):DA(e20) DT(d24):DA(e19) DT(d25):DA(e18) DT(d26):DA(e17) DG(d27):DC(e16) DA(d28):DT(e15) chainA chainB ( 8) TYR30 0 0 0 0 0 0 12 0 0 0 0 0 0 (143) ASN165 0 0 0 0 0 0 10 0 0 0 0 0 0 (146) TYR168 0 0 0 0 0 0 51 0 0 0 0 0 0 (149) HIS171 0 0 0 0 0 0 0 0 7 8 1 0 0 (150) LYS172 0 0 0 0 0 0 0 4 5 5 0 0 0 (170) ASP192 0 0 0 0 0 0 0 0 0 0 0 1 0 (171) LYS193 0 0 0 0 0 0 0 0 0 5 3 8 0 (199) TYR221 0 0 0 0 0 0 0 3 0 0 0 0 0 (231) PHE253 0 0 0 0 0 0 8 0 0 0 0 0 0 (234) ILE256 0 0 0 0 0 0 1 0 0 0 0 0 0 (236) VAL258 0 0 0 0 0 0 1 0 0 0 0 0 0 (324) GLN346 0 0 0 0 0 0 0 0 1 10 12 0 0 (327) ILE349 0 0 0 0 0 0 0 0 8 4 1 0 0 (357) SER379 0 0 0 0 0 0 2 0 0 0 0 0 0 (403) ARG425 0 0 0 0 0 0 0 0 0 0 16 12 3 (404) GLU426 0 0 0 0 0 0 0 0 0 0 1 0 0 (409) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 1 (416) GLN438 0 0 0 0 0 0 0 0 0 3 1 0 0 (417) TRP439 0 0 0 0 0 0 0 0 0 4 10 15 13 (419) ARG441 0 0 0 0 0 0 0 0 0 0 9 2 0 (433) TYR455 0 0 0 0 0 0 17 6 0 0 0 0 0 (434) LYS456 0 0 0 0 0 0 8 11 0 0 0 0 0 (450) SER472 0 0 0 0 0 0 0 0 1 0 0 0 0 (451) ALA473 0 0 0 0 0 0 0 0 4 0 0 0 0 (452) ASP474 0 0 0 0 0 0 0 1 0 0 0 0 0 (454) TYR476 0 0 0 0 0 0 0 0 0 2 0 0 0 (491) MET513 0 0 0 0 0 0 0 8 0 0 0 0 0 (492) SER514 0 0 0 0 0 5 0 7 0 0 0 0 0 (495) ILE517 0 0 0 0 0 2 3 3 0 0 0 0 0 (499) TYR521 0 0 0 0 0 0 0 0 8 2 0 0 0 prot.sequence kkasgiyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvdesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgirkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/tkkasgiYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFknIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >7rfm_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR EPZ004777 organism=Clostridioides difficile DNA sequence DT(e1):DA(d14) DG(e2):DC(d13) DG(e3):DC(d12) DG(e4):DC(d11) DA(e5):DT(d10) DC(e6):DG(d9) DT(e7):DA(d8) DT(e8):DA(d7) DT(e9):DA(d6) DT(e10):DA(d5) DT(e11):DA(d4) DG(e12):DC(d3) DA(e13):DT(d2) DT(e14):DT(d1) chainB (409) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence tkkasgiyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >7rfn_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR SGC8158 organism=Clostridioides difficile DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainA ( 3) TYR30 0 0 0 0 0 0 0 43 0 0 0 0 0 0 0 (133) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (136) TYR168 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 (139) HIS171 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 (140) LYS172 0 0 0 0 0 0 0 0 4 9 6 0 0 0 0 (160) ASP192 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (161) LYS193 0 0 0 0 0 0 0 0 0 0 6 3 6 0 0 (189) TYR221 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (221) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (224) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (226) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (314) GLN346 0 0 0 0 0 0 0 0 0 1 9 9 0 0 0 (317) ILE349 0 0 0 0 0 0 0 0 0 9 5 1 0 0 0 (347) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (393) ARG425 0 0 0 0 0 0 0 0 0 0 0 18 11 2 0 (394) GLU426 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 (399) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 (406) GLN438 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (407) TRP439 0 0 0 0 0 0 0 0 0 0 5 13 14 13 0 (409) ARG441 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 (423) TYR455 0 0 0 0 0 0 0 14 4 0 0 0 0 0 0 (424) LYS456 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 (440) SER472 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (441) ALA473 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (442) ASP474 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (444) TYR476 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (481) MET513 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (482) SER514 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 (485) ILE517 0 0 0 0 0 0 3 3 3 0 0 0 0 0 0 (489) TYR521 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 chainB (404) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFknIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >7rh2_B:"Winged_helix"_DNA-binding_domain; title=IRF4 TRANSCRIPTION FACTOR MUTANT -K59R organism=Homo sapiens DNA sequence DG(E1):DC(D19) DC(E2):DG(D18) DT(E3):DA(D17) DT(E4):DA(D16) DT(E5):DA(D15) DC(E6):DG(D14) DT(E7):DA(D13) DC(E8):DG(D12) DG(E9):DC(D11) DG(E10):DC(D10) DT(E11):DA(D9) DT(E12):DA(D8) DT(E13):DA(D7) DC(E14):DG(D6) DA(E15):DT(D5) DG(E16):DC(D4) DT(E17):DA(D3) DT(E18):DA(D2) DC(C1):DG(F19) DA(C2):DT(F18) DA(C3):DT(F17) DC(C4):DG(F16) DT(C5):DA(F15) DG(C6):DC(F14) DA(C7):DT(F13) DA(C8):DT(F12) DA(C9):DT(F11) DC(C10):DG(F10) DC(C11):DG(F9) DG(C12):DC(F8) DA(C13):DT(F7) DG(C14):DC(F6) DA(C15):DT(F5) DA(C16):DT(F4) DA(C17):DT(F3) DG(C18):DC(F2) chainB ( 39) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) THR95 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) CYS99 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS103 0 0 0 0 0 0 0 0 3 15 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ngklrqwlidqidsgkypglvweneeksifripwkhagRqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelversqldisdpykvyrivp >7rh2_GH:"Winged_helix"_DNA-binding_domain; title=IRF4 TRANSCRIPTION FACTOR MUTANT -K59R organism=Homo sapiens DNA sequence DC(C1):DG(F19) DA(C2):DT(F18) DA(C3):DT(F17) DC(C4):DG(F16) DT(C5):DA(F15) DG(C6):DC(F14) DA(C7):DT(F13) DA(C8):DT(F12) DA(C9):DT(F11) DC(C10):DG(F10) DC(C11):DG(F9) DG(C12):DC(F8) DA(C13):DT(F7) DG(C14):DC(F6) DA(C15):DT(F5) DA(C16):DT(F4) DA(C17):DT(F3) DG(C18):DC(F2) chainG ( 75) THR95 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG98 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) CYS99 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 ( 83) LYS103 0 0 0 0 0 0 0 0 7 13 3 0 0 0 0 0 0 0 chainH ( 39) ARG59 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG98 0 0 0 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 ( 79) CYS99 0 0 0 0 0 0 0 0 0 0 0 1 1 2 1 0 0 0 ( 83) LYS103 0 0 0 0 0 0 0 0 0 0 0 0 3 9 7 3 0 0 prot.sequence ngklrqwlidqidsgkypglvweneeksifripwkhagrqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelversqldisdpykvyrivp/ngklrqwlidqidsgkypglvweneeksifripwkhagRqdynreedaalfkawalfkgkfregidkpdpptwktrlRCalnKsndfeelversqldisdpykvyrivp >7rhx_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYO-EM STRUCTURE OF PRECLEAVAGE CRE TETRAMERIC COMPLEX organism=ESCHERICHIA PHAGE P1 DNA sequence DG(D-3):DC(C38) DG(D-2):DC(C37) DC(D-1):DG(C36) DG(D0):DC(C35) DA(D1):DT(C34) DT(D2):DA(C33) DA(D3):DT(C32) DA(D4):DT(C31) DC(D5):DG(C30) DT(D6):DA(C29) DT(D7):DA(C28) DC(D8):DG(C27) DG(D9):DC(C26) DT(D10):DA(C25) DA(D11):DT(C24) DT(D12):DA(C23) DA(D13):DT(C22) DA(D14):DT(C21) DT(D15):DA(C20) DG(D16):DC(C19) DT(D17):DA(C18) DA(D18):DT(C17) DT(D19):DA(C16) DG(D20):DC(C15) DC(D21):DG(C14) DT(D22):DA(C13) DA(D23):DT(C12) DT(D24):DA(C11) DA(D25):DT(C10) DC(D26):DG(C9) DG(D27):DC(C8) DA(D28):DT(C7) DA(D29):DT(C6) DG(D30):DC(C5) DT(D31):DA(C4) DT(D32):DA(C3) DA(D33):DT(C2) DT(D34):DA(C1) DG(D35):DC(C0) DC(D36):DG(C-1) DG(D37):DC(C-2) DG(D38):DC(C-3) chainA ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS244 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) SER257 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 0 0 0 3 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ASN317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (225) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 (238) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 2 0 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtatlvstagvekalslgvtklverwisvsgvaddpnnylfcrvrKngvaapsatsqlStRalegifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnIvmnyirnldsetgamvrlled/sdevrknlmdmfrdrqafseHTwKMllsvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtatlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlled >7rhx_G:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRYO-EM STRUCTURE OF PRECLEAVAGE CRE TETRAMERIC COMPLEX organism=? DNA sequence DC(E-3):DG(F38) DC(E-2):DG(F37) DG(E-1):DC(F36) DC(E0):DG(F35) DA(E1):DT(F34) DT(E2):DA(F33) DA(E3):DT(F32) DA(E4):DT(F31) DC(E5):DG(F30) DT(E6):DA(F29) DT(E7):DA(F28) DC(E8):DG(F27) DG(E9):DC(F26) DT(E10):DA(F25) DA(E11):DT(F24) DT(E12):DA(F23) DA(E13):DT(F22) DG(E14):DC(F21) DC(E15):DG(F20) DA(E16):DT(F19) DT(E17):DA(F18) DA(E18):DT(F17) DC(E19):DG(F16) DA(E20):DT(F15) DT(E21):DA(F14) DT(E22):DA(F13) DA(E23):DT(F12) DT(E24):DA(F11) DA(E25):DT(F10) DC(E26):DG(F9) DG(E27):DC(F8) DA(E28):DT(F7) DA(E29):DT(F6) DG(E30):DC(F5) DT(E31):DA(F4) DT(E32):DA(F3) DA(E33):DT(F2) DT(E34):DA(F1) DC(E35):DG(F0) DG(E36):DC(F-1) DC(E37):DG(F-2) DC(E38):DG(F-3) chainG ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) GLN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (225) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 (240) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 4 1 0 0 0 0 0 0 0 0 0 (243) GLU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 (263) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ILE320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtatlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlstRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnIvmnyirnldsetgamvrlled >7rhy_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=CRE RECOMBINASE MUTANT (D33A/A36V/R192A) IN COMPLEX WITH LOXA DNA HAIRPIN organism=ESCHERICHIA PHAGE P1 DNA sequence DG(B-1):DC(B47) DC(B0):DG(B46) DA(B1):DT(B45) DT(B2):DA(B44) DA(B3):DT(B43) DA(B4):DT(B42) DC(B5):DG(B41) DT(B6):DA(B40) DT(B7):DA(B39) DC(B8):DG(B38) DG(B9):DC(B37) DT(B10):DA(B36) DA(B11):DT(B35) DT(B12):DA(B34) DA(B13):DT(B33) DG(B14):DC(B32) DC(B15):DG(B31) DA(B16):DT(B30) DT(B17):DA(B29) DA(B18):DT(B28) DT(B19):DA(B27) DG(B20):DC(B26) DC(B21):DG(B25) DG(B22):DA(B24) chainA ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 1 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 (213) ARG241 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) LYS244 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) ARG259 0 0 0 0 0 0 0 0 2 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) GLU262 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (254) ARG282 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrarqvfseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggamlihiggvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlstRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnld >7rhz_A:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=HETERODIMER OF CRE RECOMBINASE MUTANTS D33A/A36V/R192A AND R72E/L115D/R119D IN COMPLEX WITH LOXP DNA. organism=ESCHERICHIA PHAGE P1 DNA sequence DG(C-4):DC(D39) DC(C-3):DG(D38) DC(C-2):DG(D37) DG(C-1):DC(D36) DC(C0):DG(D35) DA(C1):DT(D34) DT(C2):DA(D33) DA(C3):DT(D32) DA(C4):DT(D31) DC(C5):DG(D30) DT(C6):DA(D29) DT(C7):DA(D28) DC(C8):DG(D27) DG(C9):DC(D26) DT(C10):DA(D25) DA(C11):DT(D24) DT(C12):DA(D23) DA(C13):DT(D22) DG(C14):DC(D21) DC(C15):DG(D20) DA(C16):DT(D19) DT(C17):DA(D18) DA(C18):DT(D17) DC(C19):DG(D16) DA(C20):DT(D15) DT(C21):DA(D14) DT(C22):DA(D13) DA(C23):DT(D12) DT(C24):DA(D11) DA(C25):DT(D10) DC(C26):DG(D9) DG(C27):DC(D8) DA(C28):DT(D7) DA(C29):DT(D6) DG(C30):DC(D5) DT(C31):DA(D4) DT(C32):DA(D3) DA(C33):DT(D2) DT(C34):DA(D1) DC(C35):DG(D0) DG(C36):DC(D-1) DC(C37):DG(D-2) DC(C38):DG(D-3) DG(C39):DC(D-4) chainA ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) MET97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) ARG241 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) LYS244 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) ARG259 0 0 0 0 0 0 0 0 0 0 0 7 15 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrarqvfseHTwKMllsvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgqlnMlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggamlihiggvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlstRalegifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlledgd >7rhz_AB:DNA_breaking-rejoining_enzymes;lambda_integrase-like,_N-terminal_domain; title=HETERODIMER OF CRE RECOMBINASE MUTANTS D33A/A36V/R192A AND R72E/L115D/R119D IN COMPLEX WITH LOXP DNA. organism=ESCHERICHIA PHAGE P1 DNA sequence DC(D-4):DG(C39) DG(D-3):DC(C38) DG(D-2):DC(C37) DC(D-1):DG(C36) DG(D0):DC(C35) DA(D1):DT(C34) DT(D2):DA(C33) DA(D3):DT(C32) DA(D4):DT(C31) DC(D5):DG(C30) DT(D6):DA(C29) DT(D7):DA(C28) DC(D8):DG(C27) DG(D9):DC(C26) DT(D10):DA(C25) DA(D11):DT(C24) DT(D12):DA(C23) DA(D13):DT(C22) DA(D14):DT(C21) DT(D15):DA(C20) DG(D16):DC(C19) DT(D17):DA(C18) DA(D18):DT(C17) DT(D19):DA(C16) DG(D20):DC(C15) DC(D21):DG(C14) DT(D22):DA(C13) DA(D23):DT(C12) DT(D24):DA(C11) DA(D25):DT(C10) DC(D26):DG(C9) DG(D27):DC(C8) DA(D28):DT(C7) DA(D29):DT(C6) DG(D30):DC(C5) DT(D31):DA(C4) DT(D32):DA(C3) DA(D33):DT(C2) DT(D34):DA(C1) DG(D35):DC(C0) DC(D36):DG(C-1) DG(D37):DC(C-2) DG(D38):DC(C-3) DC(D39):DG(C-4) chainA ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) MET97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (216) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (231) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 15 7 0 0 0 0 0 0 0 0 0 0 0 (254) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) THR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) MET44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) MET97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) ARG241 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) LYS244 0 0 0 0 1 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ARG259 0 0 0 0 0 0 0 0 0 0 0 1 15 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdevrknlmdmfrarqvfseHTwKMllsvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgqlnMlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggamlihiggvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlstRalegifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlledgd/sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvedyllylqarglavKTiqQhlgqlnMlhrrsglprpsdsnavsdvmrdirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrgvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlstRalegifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtnvnivmnyirn >7rim_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX WITH HAIRPIN POLYAMIDE PY-IM 1, SCAFFOLD 1 organism=? DNA sequence DT(T3):DA(N17) DT(T4):DA(N16) DC(T5):DG(N15) DT(T6):DA(N14) DC(T7):DG(N13) DT(T8):DA(N12) DC(T9):DG(N11) DT(T10):DA(N10) DG(T11):DC(N9) DG(T12):DC(N8) DT(T13):DA(N7) DC(T14):DG(N6) DA(T15):DT(N5) DT(T16):DA(N4) DG(T17):DC(N3) chainA (1324) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainB chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvplvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlarkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrdgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddghkelkvrkghiaklmateyqdveeytwssllneglveyidaeeeesiliamqpedlepaeldvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrs/enernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >7rip_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX WITH HAIRPIN POLYAMIDE PY-IM 1, SCAFFOLD 1 SOAKED WITH CTP organism=? DNA sequence DT(T3):DA(N17) DT(T4):DA(N16) DC(T5):DG(N15) DT(T6):DA(N14) DC(T7):DG(N13) DT(T8):DA(N12) DC(T9):DG(N11) DT(T10):DA(N10) DG(T11):DC(N9) DG(T12):DC(N8) DT(T13):DA(N7) DC(T14):DG(N6) DA(T15):DT(N5) DT(T16):DA(N4) chainA (1324) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainB chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvplvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlarkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrdgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddghkelkvrkghiaklmateyqdveeytwssllneglveyidaeeeesiliamqpedlepaeldvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrs/enernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >7riq_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX SCAFFOLD 1 WITHOUT POLYAMIDE organism=? DNA sequence DC(T1):DG(N19) DC(T2):DG(N18) DT(T3):DA(N17) DT(T4):DA(N16) DC(T5):DG(N15) DT(T6):DA(N14) DC(T7):DG(N13) DT(T8):DA(N12) DC(T9):DG(N11) DT(T10):DA(N10) DG(T11):DC(N9) DG(T12):DC(N8) DT(T13):DA(N7) DC(T14):DG(N6) DA(T15):DT(N5) DT(T16):DA(N4) DG(T17):DC(N3) chainA (141) LYS143 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (1337) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvplvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid >7riq_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX SCAFFOLD 1 WITHOUT POLYAMIDE organism=? DNA sequence DC(N3):DG(T17) DA(N4):DT(T16) DT(N5):DA(T15) DG(N6):DC(T14) DA(N7):DT(T13) DC(N8):DG(T12) DC(N9):DG(T11) DA(N10):DT(T10) DG(N11):DC(T9) DA(N12):DT(T8) DG(N13):DC(T7) DA(N14):DT(T6) DG(N15):DC(T5) DA(N16):DT(T4) DA(N17):DT(T3) DG(N18):DC(T2) DG(N19):DC(T1) chainA (141) LYS143 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (1337) ARG1386 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcKtkmvcetdvplvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyesgkvfigrlpimlrskncylseatesdlyklkEcpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiglakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddghkelkvrkghiaklmateyqdveeytwssllneglveyidaeeeesiliamqpedlepaeldvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrs/enernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnIthhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >7riw_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX SCAFFOLD 2, WITHOUT POLYAMIDE organism=? DNA sequence DC(N3):DG(T17) DA(N4):DT(T16) DT(N5):DA(T15) DG(N6):DC(T14) DA(N7):DT(T13) DC(N8):DG(T12) DC(N9):DG(T11) DA(N10):DT(T10) DG(N11):DC(T9) DA(N12):DT(T8) DG(N13):DC(T7) DA(N14):DT(T6) DG(N15):DC(T5) DA(N16):DT(T4) DA(N17):DT(T3) chainA (1324) ARG1386 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvplvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiggklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddghkelkvrkghiaklmateyqdveeytwssllneglveyidaeeeesiliamqpedlepaeldvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrs/enernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >7rix_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX WITH HAIRPIN POLYAMIDE PY-IM 1, SCAFFOLD 2 organism=? DNA sequence DT(T4):DA(N16) DC(T5):DG(N15) DT(T6):DA(N14) DC(T7):DG(N13) DT(T8):DA(N12) DC(T9):DG(N11) DT(T10):DA(N10) DG(T11):DC(N9) DG(T12):DC(N8) DT(T13):DA(N7) DC(T14):DG(N6) DA(T15):DT(N5) DT(T16):DA(N4) DG(T17):DA(T18) chainA (1324) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 1 3 chainB chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvplvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlarkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiglakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddghkelkvrkghiaklmateyqdveeytwssllneglveyidaeeeesiliamqpedlepaeldvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrs/enernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >7riy_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX WITH HAIRPIN POLYAMIDE PY-IM 1, SCAFFOLD 2 SOAKED WITH UTP organism=? DNA sequence DA(N4):DT(T16) DT(N5):DA(T15) DG(N6):DC(T14) DA(N7):DT(T13) DC(N8):DG(T12) DC(N9):DG(T11) DA(N10):DT(T10) DG(N11):DC(T9) DA(N12):DT(T8) DG(N13):DC(T7) DA(N14):DT(T6) DG(N15):DC(T5) DA(N16):DT(T4) DA(N17):DT(T3) chainA (1324) ARG1386 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvplvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid >7riy_ABE: title=RNA POLYMERASE II ELONGATION COMPLEX WITH HAIRPIN POLYAMIDE PY-IM 1, SCAFFOLD 2 SOAKED WITH UTP organism=? DNA sequence DT(T3):DA(N17) DT(T4):DA(N16) DC(T5):DG(N15) DT(T6):DA(N14) DC(T7):DG(N13) DT(T8):DA(N12) DC(T9):DG(N11) DT(T10):DA(N10) DG(T11):DC(N9) DG(T12):DC(N8) DT(T13):DA(N7) DC(T14):DG(N6) DA(T15):DT(N5) DT(T16):DA(N4) chainA (1324) ARG1386 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainB chainE prot.sequence gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvplvsrggcgntqptirkdglklvgswklrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvdhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtRhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmid/desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlarkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyesgkvfigrlpimlrskncylseatesdlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcvedgfviqdretaldfigrrkekriqyakdilqkeflphitqlegfesrkafflgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveelainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfiveddghkelkvrkghiaklmateyqdveeytwssllneglveyidaeeeesiliamqpedlepaeldvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpisayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytdrs/enernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >7rpo_E:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain; title=ARCHAEAL DNA LIGASE AND HETEROTRIMERIC PCNA IN COMPLEX WITH NON- LIGATABLE DNA organism=SACCHAROLOBUS SOLFATARICUS DNA sequence DA(Z13):DT(Y11) DT(Z14):DA(Y10) DC(Z15):DG(Y9) DA(Z16):DT(Y8) DG(Z17):DC(Y7) DT(Z18):DA(Y6) DC(Z19):DG(Y5) DC(Z20):DG(Y4) DA(Z22):DT(Y2) DC(Z23):DG(Y1) DG(Z24):DC(X24) DA(Z25):DT(X23) DC(Z26):DG(X22) DG(Z27):DC(X21) DC(Z28):DG(X20) DA(Z29):DT(X19) DT(Z30):DA(X18) DC(Z31):DG(X17) DT(Z32):DA(X16) DG(Z33):DC(X15) DC(Z34):DG(X14) DA(Z35):DT(X13) DC(Z36):DG(X12) DT(Z37):DA(X11) DA(Z38):DT(X10) DC(Z39):DG(X9) DG(Z40):DC(X8) DA(Z41):DT(X7) DG(Z42):DC(X6) DG(Z43):DC(X5) chainE ( 21) ARG19 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) ARG140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (334) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence shmefkviaeyfdklekissRlqltalladllsksdktiidkvvyiiqgklwpdflgypelgigekflikaisiatntdensvenlyktigdlgevarrlkskqqstgilgflgttskesltvdevystlskvalttgegsRdlkirllagllkkadpleakflvrfvegrlrvgigdatvldamaiafgggqsaseiieraynlradlgniakiivekgiealktlkpqvgipirpmlaerlsnpeeilkkmggnaivdykydgeraqihkkedkififsrrlenitsqypdvvdyvskyiegkefiiegeivaidpesgemrpfqelmhrkRksdiyeaikeypvnvflfdlmyyedvdyttkplearrkllesivkpndyvkiahhiqannvedlksffyraiseggegvmvkaigkdaiyqagargwlwiklkrd >7rpw_E:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain; title=ARCHAEAL DNA LIGASE AND HETEROTRIMERIC PCNA IN COMPLEX WITH ADENYLATED DNA organism=? DNA sequence DA(Z13):DT(Y11) DT(Z14):DA(Y10) DC(Z15):DG(Y9) DA(Z16):DT(Y8) DG(Z17):DC(Y7) DT(Z18):DA(Y6) DC(Z19):DG(Y5) DC(Z20):DG(Y4) DG(Z21):DC(Y3) DA(Z22):DT(Y2) DC(Z23):DG(Y1) DG(Z24):DC(X24) DA(Z25):DT(X23) DC(Z26):DG(X22) DG(Z27):DC(X21) DC(Z28):DG(X20) DA(Z29):DT(X19) DT(Z30):DA(X18) DC(Z31):DG(X17) DT(Z32):DA(X16) DG(Z33):DC(X15) DC(Z34):DG(X14) DA(Z35):DT(X13) DC(Z36):DG(X12) DT(Z37):DA(X11) DA(Z38):DT(X10) DC(Z39):DG(X9) DG(Z40):DC(X8) DA(Z41):DT(X7) DG(Z42):DC(X6) DG(Z43):DC(X5) chainE (142) ARG140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 (242) ARG240 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence shmefkviaeyfdklekissrlqltalladllsksdktiidkvvyiiqgklwpdflgypelgigekflikaisiatntdensvenlyktigdlgevarrlkskqqstgilgflgttskesltvdevystlskvalttgegsRdlkirllagllkkadpleakflvrfvegrlrvgigdatvldamaiafgggqsaseiieraynlradlgniakiivekgiealktlkpqvgipirpmlaeRlsnpeeilkkmggnaivdykydgeraqihkkedkififsrrlenitsqypdvvdyvskyiegkefiiegeivaidpesgemrpfqelmhrkRksdiyeaikeypvnvflfdlmyyedvdyttkplearrkllesivkpndyvkiahhiqannvedlksffyraiseggegvmvkaigkdaiyqagargwlwiklkrd >7rpx_CE:DNA_clamp;ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain; title=ARCHAEAL DNA LIGASE AND HETEROTRIMERIC PCNA IN COMPLEX WITH END- JOINED DNA organism=SACCHAROLOBUS SOLFATARICUS DNA sequence DA(Z13):DT(X35) DT(Z14):DA(X34) DC(Z15):DG(X33) DA(Z16):DT(X32) DG(Z17):DC(X31) DT(Z18):DA(X30) DC(Z19):DG(X29) DC(Z20):DG(X28) DG(Z21):DC(X27) DA(Z22):DT(X26) DC(Z23):DG(X25) DG(Z24):DC(X24) DA(Z25):DT(X23) DC(Z26):DG(X22) DG(Z27):DC(X21) DC(Z28):DG(X20) DA(Z29):DT(X19) DT(Z30):DA(X18) DC(Z31):DG(X17) DT(Z32):DA(X16) DG(Z33):DC(X15) DC(Z34):DG(X14) DA(Z35):DT(X13) DC(Z36):DG(X12) DT(Z37):DA(X11) DA(Z38):DT(X10) DC(Z39):DG(X9) DG(Z40):DC(X8) DA(Z41):DT(X7) DG(Z42):DC(X6) DG(Z43):DC(X5) chainC chainE ( 19) ARG19 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) ARG140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ARG281 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) PHE324 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) GLN325 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (328) MET328 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkvvyddvrvlkdiiqalarlvdeavlkfkqdsvelvaldrahislisvnlpremfkeydvndefkfgfntqylmkilkvakrkeaieiasespdsviiniigstnrefnvrnlevseqeipeinlqfdisatissdgfksaisevstvtdnvvveghedrilikaegesevevefskdtgglqdlefskesknsysaeylddvlsltklsdyvkisfgnqkplqlffnmegggkvtyllapk/mefkviaeyfdklekissRlqltalladllsksdktiidkvvyiiqgklwpdflgypelgigekflikaisiatntdensvenlyktigdlgevarrlkskqqstgilgflgttskesltvdevystlskvalttgegsRdlkirllagllkkadpleakflvrfvegrlrvgigdatvldamaiafgggqsaseiieraynlradlgniakiivekgiealktlkpqvgipirpmlaerlsnpeeilkkmggnaivdykydgeraqihkkedkififsrRlenitsqypdvvdyvskyiegkefiiegeivaidpesgemrpFQelMhrkrksdiyeaikeypvnvflfdlmyyedvdyttkplearrkllesivkpndyvkiahhiqannvedlksffyraiseggegvmvkaigkdaiyqagargwlwiklkrdyqsemadtvdlvvvggfygkgkrggkissllmaaynpktdsfesvckvasgfsdeqldelqkklmeikrdvkhprvnskmepdiwvepvyvaeiigseitisplhtccqdvvekdaglsirfprfirwrddkspedatttdeilemynkqpkk >7rsr_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KOD-RI INCORPORATING PMT, N+2 organism=Thermococcus kodakarensis DNA sequence DC(T6):DG(P11) DG(T7):DC(P10) DC(T8):DG(P9) DA(T9):DT(P8) DG(T10):DC(P7) DT(T11):DA(P6) DT(T12):DA(P5) DC(T13):DG(P4) DG(T14):DC(P3) DC(T15):DG(P2) DG(T16):DC(P1) chainA (592) LYS592 7 0 0 0 0 0 0 0 0 0 0 (612) ARG612 0 8 5 0 0 0 0 0 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqrrikilansyygyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklvihiqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdptkhkydaeyyienqvlpaverilrafgyrkedlr >7rss_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KOD-RI INCORPORATING DNA, N+2 organism=Thermococcus kodakarensis DNA sequence DT(T4):DA(P13) DT(T5):DA(P12) DC(T6):DG(P11) DG(T7):DC(P10) DC(T8):DG(P9) DA(T9):DT(P8) DG(T10):DC(P7) DT(T11):DA(P6) DT(T12):DA(P5) DC(T13):DG(P4) DG(T14):DC(P3) DC(T15):DG(P2) DG(T16):DC(P1) chainA (494) TYR494 2 0 0 0 0 0 0 0 0 0 0 0 0 (592) LYS592 0 8 5 0 0 0 0 0 0 0 0 0 0 (612) ARG612 0 0 0 8 5 0 0 0 0 0 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqrrikilansyYgyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklvihiqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdptkhkydaeyyienqvlpaverilrafgyrkedlr >7rsu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=TNA POLYMERASE, N+2 PRODUCT organism=Thermococcus kodakarensis DNA sequence DC(T8):DG(P11) DG(T9):DC(P10) DC(T10):DG(P9) DA(T11):DT(P8) DG(T12):DC(P7) DT(T13):DA(P6) DT(T14):DA(P5) DC(T15):DG(P4) DG(T16):DC(P3) DC(T17):DG(P2) DG(T18):DC(P1) chainA (592) LYS592 7 0 0 0 0 0 0 0 0 0 0 (612) ARG612 1 8 8 0 0 0 0 0 0 0 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqrrikilassyygyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittggleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklviheqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdpakhkydaeyyienqvlpaverilrafgyrkedlr >7rte_C:p53-like_transcription_factors;DNA-binding_protein_LAG-1_CSL;E_set_domains; title=X-RAY STRUCTURE OF WILD TYPE RBPJ-L3MBTL3-DNA COMPLEX organism=Mus musculus DNA sequence DT(A4):DA(B30) DC(A5):DG(B29) DT(A6):DA(B28) DT(A7):DA(B27) DT(A8):DA(B26) DC(A9):DG(B25) DC(A10):DG(B24) DC(A11):DG(B23) DA(A12):DT(B22) DC(A13):DG(B21) DG(A14):DC(B20) DG(A15):DC(B19) DT(A16):DA(B18) chainC ( 35) TYR86 0 0 0 0 10 3 0 0 0 0 0 0 0 ( 38) GLU89 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 40) ARG91 0 0 0 0 0 0 2 11 10 0 0 0 0 (140) SER191 0 0 0 2 2 0 0 0 0 0 0 0 0 (141) LYS192 0 0 0 2 6 6 1 0 0 0 0 0 0 (170) SER221 0 0 0 0 0 0 0 0 2 1 0 0 0 (171) GLN222 0 0 0 0 0 0 0 0 0 5 11 2 0 prot.sequence sppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskkkqslknadlciasgtkvalfnrlrSQtvstrylhveggnfhassqqwgafyihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkeqnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlndvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgviystsltftytpep >7rti_C:p53-like_transcription_factors;DNA-binding_protein_LAG-1_CSL;E_set_domains; title=X-RAY STRUCTURE OF RBPJ-L3MBTL3(DT62)-DNA COMPLEX organism=Mus musculus DNA sequence DT(A3):DA(B30) DC(A4):DG(B29) DT(A5):DA(B28) DT(A6):DA(B27) DT(A7):DA(B26) DC(A8):DG(B25) DC(A9):DG(B24) DC(A10):DG(B23) DA(A11):DT(B22) DC(A12):DG(B21) DG(A13):DC(B20) DG(A14):DC(B19) DT(A15):DA(B18) chainC ( 35) TYR86 0 0 0 0 10 2 0 0 0 0 0 0 0 ( 38) GLU89 0 0 0 0 0 0 0 1 4 0 0 0 0 ( 40) ARG91 0 0 0 0 0 0 2 11 10 0 0 0 0 (140) SER191 0 0 0 2 2 0 0 0 0 0 0 0 0 (141) LYS192 0 0 0 2 7 6 1 0 0 0 0 0 0 (170) SER221 0 0 0 0 0 0 0 0 1 1 0 0 0 (171) GLN222 0 0 0 0 0 0 0 0 0 5 11 2 0 prot.sequence sppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskkkqslknadlciasgtkvalfnrlrSQtvstrylhveggnfhassqqwgafyihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkeqnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlndvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgviystsltftytpep >7rva_C:"Winged_helix"_DNA-binding_domain; title=UPDATED CRYSTAL STRUCTURE OF REPLICATION INITIATOR PROTEIN REPE54. organism=ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) DNA sequence DC(A1):DG(B43) DC(A2):DG(B42) DT(A3):DA(B41) DG(A4):DC(B40) DT(A5):DA(B39) DG(A6):DC(B38) DA(A7):DT(B37) DC(A8):DG(B36) DA(A9):DT(B35) DA(A10):DT(B34) DA(A11):DT(B33) DT(A12):DA(B32) DT(A13):DA(B31) DG(A14):DC(B30) DC(A15):DG(B29) DC(A16):DG(B28) DC(A17):DG(B27) DT(A18):DA(B26) DC(A19):DG(B25) DA(A20):DT(B24) DG(A21):DC(B23) chainC ( 59) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 60) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 61) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 1 0 0 0 0 0 ( 63) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 64) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 ( 67) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 98) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 (171) SER197 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) TYR198 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG200 0 0 4 9 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) PRO202 0 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ASP203 0 0 0 0 1 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ARG206 0 0 0 0 14 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG207 0 0 0 0 0 0 5 19 17 0 0 0 0 0 0 0 0 0 0 0 0 (207) ARG233 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krknsprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyryesfpwfikpahspsRglysvhinpylipffiglqnrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdits >7rwi_CD: title=MYCOBACTERIUM TUBERCULOSIS RNA POLYMERASE SIGMA L HOLOENZYME OPEN PROMOTER COMPLEX CONTAINING TNP-2198 organism=MYCOBACTERIUM TUBERCULOSIS DNA sequence DG(G4):DC(H25) DC(G5):DG(H24) DA(G6):DT(H23) DT(G7):DA(H22) DC(G8):DG(H21) DC(G9):DG(H20) DG(G10):DC(H19) DT(G11):DA(H18) DG(G12):DC(H17) DA(G13):DT(H16) chainC (440) ARG467 0 0 0 0 0 0 0 0 0 6 chainD (285) GLN287 3 0 0 0 0 0 0 0 0 0 (289) ARG291 0 6 4 0 0 0 0 0 0 0 prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa >7rwi_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS RNA POLYMERASE SIGMA L HOLOENZYME OPEN PROMOTER COMPLEX CONTAINING TNP-2198 organism=? DNA sequence DT(H16):DA(G13) DC(H17):DG(G12) DA(H18):DT(G11) DC(H19):DG(G10) DG(H20):DC(G9) DG(H21):DC(G8) DA(H22):DT(G7) DT(H23):DA(G6) DG(H24):DC(G5) DC(H25):DG(G4) chainD (285) GLN287 0 0 0 0 0 0 0 0 0 3 (289) ARG291 0 0 0 0 0 0 0 4 6 0 prot.sequence dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklRalkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa >7s01_CD: title=X-RAY STRUCTURE OF THE PHAGE AR9 NON-VIRION RNA POLYMERASE HOLOENZYME IN COMPLEX WITH A FORKED OLIGONUCLEOTIDE CONTAINING THE P077 PROMOTER organism=? DNA sequence DT(T21) DA(T20) DT(T19) DA(T18) DA(T17) DT(T2) DC(T3) DC(T4) DA(T5) DA(T6) DT(T7) DA(T8) DT(T9) DG(T10) DT(T11) DG(T12) DA(T13) DT(T14) DA(T15) DT(T16):DA(T17) chainD (266) TYR266 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 chainC prot.sequence mddisviknedyegshrflaeellmpnanktdgnrstmfcshlaqavtlqkaepplvytnfenqvgkystagyrkansnykviekiykndynyvlivqdqetgeytlferaecefltehygfqwdndkidslkkddtiekdtvlykntcydenmnfgygvnlnaayfsyknetledaivisesaakklgtfsvnkvkvsvntndillnlygdnenykgfpdigehiknqiiasrrrfdyntalyelknlnemrdsdtpffadgkivdieifsnvpeeelkvqkyneqvlyyinkqkefsnnvyqklkkivegkdnnvsdkllhfynnckmridenisytyqnskfsgfimeftileeeplnkgskitgrygnkgviskilpddqmptvaegrfkglkadiclnplgvfnrlnpsqlieqelnwiakfirkdmeeagsneekvsilldflnrvnkeetelmeefinslnkteleeflndiiengipicqkpffgnigldelwelynhydhidyfkcegistpliigeiymvrlkhephskfsarstsfmnlrglpaksknfkehkdlysktpvrignmeisnlsltnemgsimdmlnsysnnetnrrelimqlltgnpfdtnidlsdvesgtskilkslftclglsiddv/mektynlndillsneyekikedikeeiindmaskkvkysntsefakndflkdefidlvvdgetyeitygnlitllivarpfnhfkvpmtedllfdlsdlkeyqnyyttllehfgysneiksiikdviselaifsgdinvtfgntvsikslidlgnkvkrfrellhyrlpndealefndieaiikknldeimkilsetdnmlryyidsgaginskqfgqvlslvgskpdlfgkiipypintsflrgldvrsfyinalgarkalitnYqqvrnsgyltrkismllmdtklidlddcgshennylsinvenkdvlkrfskrsylnnngelveidindesligqvikipspttcasnegvcrkcygklfdinkdlnigmiavllltdpltqrllsakhlletrsskidwgtnfeenfivnrnliypkvyngtviikeddfkedeeteeqvfdtftlksgnrfisisspmrlflnkdlkkqldesfynieemqfeiplnkldegdsfatfimdnnelskplreikdlietnkyikdhnvnevvnyfiyllnesginiqsvhseliiremmklddsdrtqfkndkmpdyeifritdanlkgdslsrsllfeqvkkqlttldydtfnktkssildkll >7s03_A:Homeodomain-like; title=DNA-BINDING DOMAIN OF HUMAN SETMAR IN COMPLEX WITH HSMAR1 TERMINAL INVERTED REPEAT (TIR) DNA organism=Homo sapiens DNA sequence DG(C1):DC(B25) DG(C2):DC(B24) DT(C3):DA(B23) DT(C4):DA(B22) DG(C5):DC(B21) DG(C6):DC(B20) DT(C7):DA(B19) DG(C8):DC(B18) DC(C9):DG(B17) DA(C10):DT(B16) DA(C11):DT(B15) DA(C12):DT(B14) DA(C13):DT(B13) DG(C14):DC(B12) DT(C15):DA(B11) DA(C16):DT(B10) DA(C17):DT(B9) DT(C18):DA(B8) DT(C19):DA(B7) DG(C20):DC(B6) DC(C21):DG(B5) DG(C22):DC(B4) DG(C23):DC(B3) DT(C24):DA(B2) DT(C25):DA(B1) chainA ( 41) GLU370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 42) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 15 19 0 0 0 ( 43) THR372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 45) GLN374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 ( 46) TRP375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 ( 63) ARG392 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 8 0 0 0 0 0 0 0 0 0 ( 66) ARG395 0 0 0 0 0 0 0 0 0 1 7 14 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) THR416 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG417 0 0 0 8 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ASN426 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) HIS427 0 0 0 0 6 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) SER428 0 0 0 0 0 0 4 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) THR429 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) VAL431 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ARG432 0 0 0 0 0 0 8 7 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kmmldkkqiraiflfefkmgrkaaettrnmnnafgpgtanERTvQWwfkkfrkgdesledeeRsgRpsevdndqlraiieadplttTRevaeemnvNHSTvVRhlkqi >7s0t_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF DNA POLYMERASE ZETA WITH MISMATCHED DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(P106):DG(T14) DC(P107):DG(T13) DT(P108):DA(T12) DC(P109):DG(T11) DC(P110):DG(T10) DC(P111):DG(T9) DC(P112):DG(T8) DT(P113):DA(T7) DA(P114):DT(T6) DC(P115):DA(T5) chainA (883) TYR1093 0 0 0 0 0 0 0 0 0 1 (985) ARG1195 0 0 0 0 0 3 1 0 0 0 (1010) ARG1220 0 0 0 0 0 3 1 0 0 0 prot.sequence sdyfriqlnnqdyymskptfldpshgeslplnqfsqvpnirvfgalptghqvlchvhgilpymfikydgqitdtstlrhqrcaqvhktlevkirasfkklgnlnfvadvsvvkgipfygyhvgwnlfykisllnpsclsriselirdgkifgkkfeiyeshipyllqwtadfnlfgcswinvdrcyfrspvlnsildidkltinddlqllldrfcdfkcnvlsrrdfprvgnglieidilpqfiknreklqhrdihhdfleklgkpyvssardmineltmqreykeppetkrhvsghqwqssgefeafykkaqhktstipnfenfidkqkfsaintpyealpqlwprlpqieaglrygkrafvygeppfgyqdilnkledegfpkidykdpffsnpvdlenkpyayagkrfeissthvstripvqfggetvsvynkptfdmfsswkyalkpptydavqkwynkvpssvhdslthltleihantrsdkipdpaidevsmiiwcleeetfpldldiayegimivhkadstfptkiqhcineipvmfyesefemfealtdlvllldpdilsgfeihnfswgyiiercqkihqfdivrelarvkcsdtwgyahssgimitgrhminiwralrsdvnltqytiesaafnilhkrlphfsfesltnmwnakksttelktvlnywlsraqiniqllrkqdyiarnieqarligidfhsvyyrgsqfkvesfliricksesfillspgkkdvrkqkalecvplvmepesafyksplivldfqslypsimigynycystmigrvreinltennlgvskfslprnilallkndvtiapngvvyaktsvrkstlskmltdildvrvmikktmttlkrllnnkqlalkllanvtYgytsasfsgrmpcsdladsivqtgretlekaidiiekdetwnakvvygdtdslfvylpgktaieafsighamaervtqnnpkpiflkfekvyhpsiliskkRyvgfsyespsqtlpifdakgietvRrdgipaqqkiiekcirllfqtkdlskikkylqneffkiqigkvsaqdfcfakevklgayksektapagavvvkrrinaepqykeripylvvkqllrcvspeflegldseyyinkilippldrlfnliginvgnwaqeikrstttlsflikklkrqkeyqtlktvcrtcsyrytsdagiendhiaskcnsydcpvfysrvkaerylrdnqsvqreealisln >7s36_P: title=CAS9:SGRNA:DNA (S. PYOGENES) WITH 0 RNA:DNA BASE PAIRS, CLOSED- PROTEIN/BENT-DNA CONFORMATION organism=STREPTOCOCCUS PYOGENES SEROTYPE M1 DNA sequence DA(N9):DT(T22) DA(N10):DT(T21) DG(N11):DC(T20) DA(N12):DT(T19) DT(N13):DA(T18) DG(N14):DC(T17) DA(N15):DT(T16) DG(N16):DC(T15) DA(N17):DT(T14) DC(N18):DG(T13) DA(N19):DT(T12) DA(N20):DT(T11) DT(N21):DA(T10) DG(N22):DC(T9) DG(N23):DC(T8) DC(N24):DG(T7) DG(N25):DT(T5) DA(N26):DA(T4) DT(N27):DA(T3) DT(N28):DT(T2) DA(N29):DG(T1) chainP ( 63) LYS65 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (261) LYS263 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1096) LYS1107 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 (1097) GLU1108 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 (1208) GLU1219 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (1322) ARG1333 0 0 0 0 0 0 0 0 0 0 0 0 16 9 1 0 0 0 0 0 0 (1324) ARG1335 0 0 0 0 0 0 0 0 0 0 0 0 0 13 12 1 0 0 0 0 0 (1326) CYS1337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence kkysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlKrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaKlqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemaqknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdhivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydvrkmiakseqeigkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKEsilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRyCstkevldatlihqsitglyetridlsq >7s38_P: title=CAS9:SGRNA:DNA (S. PYOGENES) FORMING A 3-BASE-PAIR R-LOOP organism=STREPTOCOCCUS PYOGENES SEROTYPE M1 DNA sequence DC(N5):DG(T26) DA(N6):DT(T25) DT(N7):DA(T24) DA(N8):DT(T23) DA(N9):DT(T22) DA(N10):DT(T21) DG(N11):DC(T20) DA(N12):DT(T19) DT(N13):DA(T18) DG(N14):DC(T17) DA(N15):DT(T16) DG(N16):DC(T15) DA(N17):DT(T14) DG(N18):DG(T13) DT(N19):DT(T12) DT(N20):DT(T11) DT(N21):DA(T10) DG(N22):DC(T9) DG(N23):DC(T8) DC(N24):DG(T7) DG(N25):DT(T5) DA(N26):DA(T4) DT(N27):DA(T3) DT(N28):DT(T2) DA(N29):DG(T1) chainP ( 63) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 70) TYR72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (1096) LYS1107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 (1097) GLU1108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (1208) GLU1219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (1322) ARG1333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 11 1 0 0 0 0 0 0 (1324) ARG1335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 6 0 0 0 0 0 (1326) CYS1337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence kkysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlKrtarrrYtrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemaqknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdhivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydvrkmiakseqeigkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKEsilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRyCstkevldatlihqsitglyetridlsq >7s3h_P: title=CAS9:SGRNA:DNA (S. PYOGENES) WITH 0 RNA:DNA BASE PAIRS, OPEN- PROTEIN/LINEAR-DNA CONFORMATION organism=STREPTOCOCCUS PYOGENES SEROTYPE M1 DNA sequence DA(N8):DT(T23) DA(N9):DT(T22) DA(N10):DT(T21) DG(N11):DC(T20) DA(N12):DT(T19) DT(N13):DA(T18) DG(N14):DC(T17) DA(N15):DT(T16) DG(N16):DC(T15) DA(N17):DT(T14) DC(N18):DG(T13) DA(N19):DT(T12) DA(N20):DT(T11) DT(N21):DA(T10) DG(N22):DC(T9) DG(N23):DC(T8) DC(N24):DG(T7) DG(N25):DT(T5) DA(N26):DA(T4) DT(N27):DA(T3) DT(N28):DT(T2) DA(N29):DG(T1) chainP (885) GLU1219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (999) ARG1333 0 0 0 0 0 0 0 0 0 0 0 0 0 13 9 0 0 0 0 0 0 0 (1001) ARG1335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 15 0 0 0 0 0 0 (1003) CYS1337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 prot.sequence kkysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvvayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfrqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarenqttqkgqknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdhivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydvrkmiakseqeigkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtgsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRyCstkevldatlihqsitglyetridlsq >7s4u_A: title=CRYO-EM STRUCTURE OF CAS9 IN COMPLEX WITH 12-14MM DNA SUBSTRATE, 5 MINUTE TIME-POINT organism=STREPTOCOCCUS PYOGENES DNA sequence DG(D39):DA(C19) DG(D40):DC(C18) DA(D41):DC(C17) DG(D42):DT(C16) DT(D43):DC(C15) DA(D44):DT(C13) DC(D45):DG(C12) DA(D46):DT(C11) DA(D47):DT(C10) DA(D48):DT(C9) DC(D49):DG(C8) DG(D50):DC(C7) chainA (833) LYS1107 4 2 0 0 0 0 0 0 0 0 0 0 (1058) ASP1332 0 0 0 1 0 0 0 0 0 0 0 0 (1059) ARG1333 3 8 0 0 0 0 0 0 0 0 0 0 (1061) ARG1335 0 1 8 1 0 0 0 0 0 0 0 0 prot.sequence kkysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqidlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyaflsgeqkkaivdllfktnrkvtvkqlkedyfkkieaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirktildflksdgfanrnfmqlihddsltfkediqkaqdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemtrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagelqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttiDRkRytstkevldatlihqsitglyetridlsqlg >7s4v_A: title=CAS9 BOUND TO 12-14MM DNA, 60 MIN TIME-POINT, KINKED CONFORMATION organism=STREPTOCOCCUS PYOGENES DNA sequence DG(D1):DT(C14) DC(D2):DG(C13) DT(D3):DC(C12) DC(D30):DG(C11) DT(D31):DA(C10) DG(D32):DC(C9) DG(D33):DC(C8) DC(D34):DG(C7) DG(D35):DC(C6) DA(D36):DT(C5) DT(D37):DA(C4) DT(D38):DA(C3) DA(D39):DT(C2) DG(D40):DC(C1) chainA (863) LYS1107 0 0 0 0 2 2 0 0 0 0 0 0 0 0 (975) GLU1219 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (1089) ARG1333 0 0 0 0 7 3 0 0 0 0 0 0 0 0 (1091) ARG1335 0 0 0 0 0 2 2 2 0 0 0 0 0 0 prot.sequence kkysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqidlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarenrqitkhvaqildsrmntkydendkirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkykgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7s6h_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=HUMAN PARP1 DELTAV687-E688 BOUND TO NAD+ ANALOG EB-47 AND TO A DNA DOUBLE STRAND BREAK. organism=HOMO SAPIENS DNA sequence DC(M1):DG(N26) DG(M2):DC(N25) DA(M3):DT(N24) DC(M4):DG(N23) DG(M5):DC(N22) chainA ( 13) ARG18 0 0 2 2 0 ( 39) PHE44 51 0 0 0 0 ( 43) VAL48 10 0 0 0 0 prot.sequence dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeakskkekdkdsklekalkaqndliwnikdelkkvcstndlkellifnkqqvpsgesaildrvadgmvfgallpceecsgqlvfksdayyctgdvtawtkcmvktqtpnrkewvtpkefreisylkklkvkkqdrifpp >7s6h_AB:Glucocorticoid_receptor-like_DNA-binding_domain;ADP-ribosylation;Domain_of_polyADP-ribose_polymerase;WGR_domain-like; title=HUMAN PARP1 DELTAV687-E688 BOUND TO NAD+ ANALOG EB-47 AND TO A DNA DOUBLE STRAND BREAK. organism=? DNA sequence DC(M1):DG(N26) DG(M2):DC(N25) DA(M3):DT(N24) DC(M4):DG(N23) DG(M5):DC(N22) chainB ( 59) TRP589 1 0 0 0 0 chainA ( 13) ARG18 0 0 2 2 0 ( 39) PHE44 51 0 0 0 0 ( 43) VAL48 10 0 0 0 0 prot.sequence dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeakskkekdkdsklekalkaqndliwnikdelkkvcstndlkellifnkqqvpsgesaildrvadgmvfgallpceecsgqlvfksdayyctgdvtawtkcmvktqtpnrkewvtpkefreisylkklkvkkqdrifpp/aavdpdsglehsahvlekggkvfsatlglvdivkgtnsyyklqlleddkenrywifrsWgrvgtvigsnkleqmpskedaiehfmklyeektgnawhsknftkypkkfypleidyggtksklpkpvqdlikmifdvesmkkamyeidlqkmplgklskrqiqaaysilsevqqavsqgssdsqildlsnrfytliphdfgmkkppllnnadsvqakaemldnlldievaysllrggdpidvnyeklktdikvvdrdseeaeiirkyvknthatthnaydlevidifkieregecqrykpfkqlhnrrllwhgsrttnfagilsqglriappeapvtgymfgkgiyfadmvsksanychtsqgdpiglillgevalgnmyelkhashisklpkgkhsvkglgkttpdpsanisldgvdvplgtgissgvndtsllyneyivydiaqvnlkyllklkfnfktslwlehhhh >7s6h_B:ADP-ribosylation;Domain_of_polyADP-ribose_polymerase;WGR_domain-like; title=HUMAN PARP1 DELTAV687-E688 BOUND TO NAD+ ANALOG EB-47 AND TO A DNA DOUBLE STRAND BREAK. organism=HOMO SAPIENS DNA sequence DC(M1):DG(N26) DG(M2):DC(N25) DA(M3):DT(N24) DC(M4):DG(N23) DG(M5):DC(N22) chainB ( 59) TRP589 1 0 0 0 0 prot.sequence aavdpdsglehsahvlekggkvfsatlglvdivkgtnsyyklqlleddkenrywifrsWgrvgtvigsnkleqmpskedaiehfmklyeektgnawhsknftkypkkfypleidyggtksklpkpvqdlikmifdvesmkkamyeidlqkmplgklskrqiqaaysilsevqqavsqgssdsqildlsnrfytliphdfgmkkppllnnadsvqakaemldnlldievaysllrggdpidvnyeklktdikvvdrdseeaeiirkyvknthatthnaydlevidifkieregecqrykpfkqlhnrrllwhgsrttnfagilsqglriappeapvtgymfgkgiyfadmvsksanychtsqgdpiglillgevalgnmyelkhashisklpkgkhsvkglgkttpdpsanisldgvdvplgtgissgvndtsllyneyivydiaqvnlkyllklkfnfktslwlehhhh >7s6m_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=HUMAN PARP1 DELTAV687-E688 BOUND TO A DNA DOUBLE STRAND BREAK. organism=? DNA sequence DC(N1):DG(M26) DG(N2):DC(M25) DA(N3):DT(M24) DC(N4):DG(M23) DG(N5):DC(M22) chainA ( 13) ARG18 0 0 3 1 0 ( 39) PHE44 42 0 0 0 0 ( 43) VAL48 5 0 0 0 0 prot.sequence dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaekdkdsklekalkaqndliwnikdelkkvcstndlkellifnkqqvpsgesaildrvadgmvfgallpceecsgqlvfksdayyctgdvtawtkcmvktqtpnrkewvtpkefreisylkklkvkkqdrifpp >7s6m_CD:Glucocorticoid_receptor-like_DNA-binding_domain;ADP-ribosylation;Domain_of_polyADP-ribose_polymerase;WGR_domain-like; title=HUMAN PARP1 DELTAV687-E688 BOUND TO A DNA DOUBLE STRAND BREAK. organism=HOMO SAPIENS DNA sequence DC(O1):DG(P26) DG(O2):DC(P25) DA(O3):DT(P24) DC(O4):DG(P23) DG(O5):DC(P22) chainD ( 59) TRP589 1 0 0 0 0 chainC ( 13) ARG18 0 0 1 1 0 ( 39) PHE44 52 0 0 0 0 ( 43) VAL48 7 0 0 0 0 prot.sequence dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVphwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaskkekdkdsklekalkaqndliwnikdelkkvcstndlkellifnkqqvpsgesaildrvadgmvfgallpceecsgqlvfksdayyctgdvtawtkcmvktqtpnrkewvtpkefreisylkklkvkkqdrifpp/aavdpdsglehsahvlekggkvfsatlglvdivkgtnsyyklqlleddkenrywifrsWgrvgtvigsnkleqmpskedaiehfmklyeektgnawhsknftkypkkfypleidyggtksklpkpvqdlikmifdvesmkkamyeidlqkmplgklskrqiqaaysilsevqqavsqgssdsqildlsnrfytliphdfgmkkppllnnadsvqakaemldnlldievaysllrgsskdpidvnyeklktdikvvdrdseeaeiirkyvknthatthnaydlevidifkieregecqrykpfkqlhnrrllwhgsrttnfagilsqglriappeapvtgymfgkgiyfadmvsksanychtsqgdpiglillgevalgnmyelkhashisklpkgkhsvkglgkttpdpsanisldgvdvplgtgissgvndtsllyneyivydiaqvnlkyllklkfnfktslwlehhhh >7s81_AF:Glucocorticoid_receptor-like_DNA-binding_domain;WGR_domain-like;Domain_of_polyADP-ribose_polymerase; title=STRUCTURE OF HUMAN PARP1 DOMAINS (ZN1, ZN3, WGR, HD) BOUND TO A DNA DOUBLE STRAND BREAK. organism=HOMO SAPIENS DNA sequence DA(D1):DT(E26) DT(D2):DA(E25) DG(D3):DC(E24) DC(D4):DG(E23) DG(D5):DC(E22) DG(D6):DC(E21) DC(D7):DG(E20) DC(D8):DG(E19) DG(D9):DC(E18) DC(D10):DG(E17) DA(D11):DT(E16) DT(D12):DA(E15) chainA ( 14) ARG18 0 0 3 3 0 0 0 0 0 0 0 0 ( 40) PHE44 31 0 0 0 0 0 0 0 0 0 0 0 ( 44) VAL48 6 0 0 0 0 0 0 0 0 0 0 0 ( 45) PRO49 1 0 0 0 0 0 0 0 0 0 0 0 chainF ( 13) ARG18 0 0 0 0 0 0 0 0 1 5 0 0 ( 39) PHE44 0 0 0 0 0 0 0 0 0 0 0 55 ( 43) VAL48 0 0 0 0 0 0 0 0 0 0 0 8 ( 44) PRO49 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence sdklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaggvt/dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktae >7s81_C:WGR_domain-like;Domain_of_polyADP-ribose_polymerase; title=STRUCTURE OF HUMAN PARP1 DOMAINS (ZN1, ZN3, WGR, HD) BOUND TO A DNA DOUBLE STRAND BREAK. organism=? DNA sequence DA(D1) DT(D2) DG(D3) DC(D4) DG(D5) DG(D6) DC(D7) DC(D8) DG(D9) DC(D10) DA(D11) DT(D12) chainC ( 91) LYS621 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence aavdpdsglehsahvlekggkvfsatlglvdivkgtnsyyklqlleddkenrywifrswgrvgtvigsnkleqmpskedaiehfmklyeeKtgnawhsknftkypkkfypleiddvesmkkamveyeidlqkmplgklskrqiqaaysilsevqqavsqgssdsqildlsnrfytliphdfgmkkppllnnadsvqakaemldnlldievays >7s81_CG:Glucocorticoid_receptor-like_DNA-binding_domain;WGR_domain-like;Domain_of_polyADP-ribose_polymerase; title=STRUCTURE OF HUMAN PARP1 DOMAINS (ZN1, ZN3, WGR, HD) BOUND TO A DNA DOUBLE STRAND BREAK. organism=HOMO SAPIENS DNA sequence DA(D1) DT(D2) DG(D3) DC(D4) DG(D5) DG(D6) DC(D7) DC(D8) DG(D9) DC(D10) DA(D11) DT(D12) chainC ( 91) LYS621 0 1 0 0 0 0 0 0 0 0 0 0 chainG prot.sequence aavdpdsglehsahvlekggkvfsatlglvdivkgtnsyyklqlleddkenrywifrswgrvgtvigsnkleqmpskedaiehfmklyeeKtgnawhsknftkypkkfypleiddvesmkkamveyeidlqkmplgklskrqiqaaysilsevqqavsqgssdsqildlsnrfytliphdfgmkkppllnnadsvqakaemldnlldievays/skkekdkdsklekalkaqndliwnikdelkkvcstndlkellifnkqqvpsgesaildrvadgmvfgallpceecsgqlvfksdayyctgDvtawtkcmvktqtpnrkewvtpkefreisylkklkvkkqdrifp >7s81_IN:Glucocorticoid_receptor-like_DNA-binding_domain;WGR_domain-like;Domain_of_polyADP-ribose_polymerase; title=STRUCTURE OF HUMAN PARP1 DOMAINS (ZN1, ZN3, WGR, HD) BOUND TO A DNA DOUBLE STRAND BREAK. organism=HOMO SAPIENS DNA sequence DA(L15):DT(M12) DT(L16):DA(M11) DG(L17):DC(M10) DC(L18):DG(M9) DG(L19):DC(M8) DG(L20):DC(M7) DC(L21):DG(M6) DC(L22):DG(M5) DG(L23):DC(M4) DC(L24):DG(M3) DA(L25):DT(M2) DT(L26):DA(M1) chainN ( 13) ARG18 0 0 6 5 0 0 0 0 0 0 0 0 ( 39) PHE44 38 0 0 0 0 0 0 0 0 0 0 0 ( 43) VAL48 8 0 0 0 0 0 0 0 0 0 0 0 ( 44) PRO49 1 0 0 0 0 0 0 0 0 0 0 0 chainI ( 14) ARG18 0 0 0 0 0 0 0 1 5 5 0 0 ( 40) PHE44 0 0 0 0 0 0 0 0 0 0 0 24 ( 44) VAL48 0 0 0 0 0 0 0 0 0 0 0 6 ( 45) PRO49 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence sdklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaea/dklyrveyaksgRasckkcsesipkdslrmaimvqspmFdgkVPhwyhfscfwkvghsirhpdvevdgfselrwddqqkvkktaeaggv >7s81_KO:Glucocorticoid_receptor-like_DNA-binding_domain;WGR_domain-like;Domain_of_polyADP-ribose_polymerase; title=STRUCTURE OF HUMAN PARP1 DOMAINS (ZN1, ZN3, WGR, HD) BOUND TO A DNA DOUBLE STRAND BREAK. organism=HOMO SAPIENS DNA sequence DA(M1) DT(M2) DG(M3) DC(M4) DG(M5) DG(M6) DC(M7) DC(M8) DG(M9) DC(M10) DA(M11) DT(M12) chainK ( 91) LYS621 0 1 0 0 0 0 0 0 0 0 0 0 chainO prot.sequence aavdpdsglehsahvlekggkvfsatlglvdivkgtnsyyklqlleddkenrywifrswgrvgtvigsnkleqmpskedaiehfmklyeeKtgnawhsknftkypkkfypleidygeidlqkmplgklskrqiqaaysilsevqqavsqgssdsqildlsnrfytliphdfgmkkppllnnadsvqakaemldnlldievays/kkskkekdkdsklekalkaqndliwnikdelkkvcstndlkellifnkqqvpsgesaildrvadgmvfgallpceecsgqlvfksdayycTgdvtawtkcmvktqtpnrkewvtpkefreisylkklkvkkqdrifpp >7s9j_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH FAPY-DG BASE-PAIRED WITH A DC organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 37 0 0 0 0 ( 29) LYS35 9 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7s9k_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH FAPY-DG BASE-PAIRED WITH A DA organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 40 0 0 0 0 ( 29) LYS35 9 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7s9l_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH RING OPEN INTERMEDIATE FAPY-DG BASE-PAIRED WITH A DC organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 36 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 5 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7s9m_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH RING OPEN INTERMEDIATE FAPY-DG BASE-PAIRED WITH A DA organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 41 ( 29) LYS35 0 0 0 0 8 ( 32) ALA38 0 0 0 0 5 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7s9n_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX OF DNA POLYMERASE BETA WITH FAPY-DG IN THE TEMPLATE POSITION organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 28) HIS34 37 0 0 0 0 ( 29) LYS35 9 0 0 0 0 ( 32) ALA38 5 0 0 0 0 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7s9o_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=BINARY COMPLEX OF DNA POLYMERASE BETA WITH RING OPEN INTERMEDIATE FAPY-DG IN THE TEMPLATE POSITION organism=Homo sapiens DNA sequence DC(T1):DG(D5) DC(T2):DG(D4) DG(T3):DC(D3) DA(T4):DT(D2) DC(T5):DG(D1) chainA ( 28) HIS34 0 0 0 0 40 ( 29) LYS35 0 0 0 0 9 ( 32) ALA38 0 0 0 0 4 prot.sequence pqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7s9p_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH TEMPLATE FAPY-DG AND AN INCOMING DCTP ANALOG organism=Homo sapiens DNA sequence DT(T7):DA(P10) DC(T8):DG(P9) DG(T9):DC(P8) DC(T10):DG(P7) DA(T11):DT(P6) DT(T12):DA(P5) DC(T13):DG(P4) DA(T14):DT(P3) DG(T15):DC(P2) DC(T16):DG(P1) chainA (225) LYS234 0 0 4 0 0 0 0 0 0 0 (262) TYR271 8 0 0 0 0 0 0 0 0 0 (274) ARG283 4 0 0 0 0 0 0 0 0 0 prot.sequence tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrriirlipkdqyycgvlYftgsdifnknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7s9q_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=TERNARY COMPLEX OF DNA POLYMERASE BETA WITH TEMPLATE FAPY-DG AND AN INCOMING DATP ANALOG organism=Homo sapiens DNA sequence DG(D1):DC(T5) DT(D2):DA(T4) DC(D3):DG(T3) DG(D4):DC(T2) DG(D5):DC(T1) chainA ( 26) HIS34 40 0 0 0 0 ( 27) LYS35 5 0 0 0 0 ( 30) ALA38 5 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaiHKynAykaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >7sba_A: title=STRUCTURE OF TYPE I-D CASCADE BOUND TO A DSDNA TARGET organism=SYNECHOCYSTIS SP. PCC 6803 DNA sequence DA(X1) DC(X2) DA(X3) DA(X4) DC(X5) DA(X6) DA(X7) DT(X8) DC(X9) DA(X10) DA(X11) DC(X12) DG(X13) DT(X14) DG(X15) DA(X16) chainA (146) THR146 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE147 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (156) MET156 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) MET162 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ALA165 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (166) ILE166 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 (167) ASN167 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mldslksqfqpsfprlasghyvhflmlrhsqsfpvfqtdgvlnttrtqagllektdqlsrlvmfkrkqttperlagrellrnlgltsadksaknlceyngegsckqcpdcilygfaigdsgserskvysdsafslgayeqshrsfTFnapfeggtMseagvMrsAINeldhilpevtfptveslrdatyegfiyvlgnllrtkrygaqesrtgtmknhlvgivfadgeifsnlhltqalydqmggelnkpiselcetaatvaqdllnkepvrkselifgahldtllqevndiyqndaeltkllgslyqqtqdyatefgal >7sba_ABC: title=STRUCTURE OF TYPE I-D CASCADE BOUND TO A DSDNA TARGET organism=SYNECHOCYSTIS SP. PCC 6803 DNA sequence DA(X1) DC(X2) DA(X3) DA(X4) DC(X5) DA(X6) DA(X7) DT(X8) DC(X9) DA(X10) DA(X11) DC(X12) DG(X13) DT(X14) DG(X15) DA(X16) chainA (146) THR146 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE147 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (156) MET156 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) MET162 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ALA165 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (166) ILE166 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 (167) ASN167 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 chainB (117) ILE117 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 chainC prot.sequence mldslksqfqpsfprlasghyvhflmlrhsqsfpvfqtdgvlnttrtqagllektdqlsrlvmfkrkqttperlagrellrnlgltsadksaknlceyngegsckqcpdcilygfaigdsgserskvysdsafslgayeqshrsfTFnapfeggtMseagvMrsAINeldhilpevtfptveslrdatyegfiyvlgnllrtkrygaqesrtgtmknhlvgivfadgeifsnlhltqalydqmggelnkpiselcetaatvaqdllnkepvrkselifgahldtllqevndiyqndaeltkllgslyqqtqdyatefgal/mldslksqfqpsfprlasghyvhflmlrhsqsfpvfqtdgvlnttrtqagllektdqlsrlvmfkrkqttperlagrellrnlgltsadksaknlceyngegsckqcpdcilygfaIgdsgserskvysdsafslgayeqshrsftfnapfeggtmseagvmrsaineldhilpevtfptveslrdatyegfiyvlgnllrtkrygaqesrtgtmknhlvgivfadgeifsnlhltqalydqmggelnkpiselcetaatvaqdllnkepvrkselifgahldtllqevndiyqndaeltkllgslyqqtqdyatefgal/mldslksqfqpsfprlasghyvhflmlrhsqsfpvfqtdgvlnttrtqagllektdqlsrlvmfkrkqttperlagrellrnlgltsadksaknlceyngegsckqcpdcilygfaIgdsgserskvysdsafslgayeqshrsftfnapfeggtmseagvmrsaineldhilpevtfptveslrdatyegfiyvlgnllrtkrygaqesrtgtmknhlvgivfadgeifsnlhltqalydqmggelnkpiselcetaatvaqdllnkepvrkselifgahldtllqevndiyqndaeltkllgslyqqtqdyatefgal >7sba_HI: title=STRUCTURE OF TYPE I-D CASCADE BOUND TO A DSDNA TARGET organism=SYNECHOCYSTIS SP. PCC 6803 DNA sequence DC(Y1):DG(X15) DA(Y2):DT(X14) DC(Y3):DG(X13) DG(Y4):DC(X12) DT(Y5):DA(X11) DT(Y6):DA(X10) chainH (109) GLN110 0 0 0 0 0 15 (113) LYS114 0 0 4 7 2 0 chainI (259) LYS326 0 0 0 6 8 0 (485) GLN552 0 0 0 0 7 1 (499) LYS566 0 0 0 0 1 0 prot.sequence tkiyrckltlhdnvffasremgilyetekyfhnwalsyaffkgtiiphpyglvgqnaqtpayldrdreqnllhlndsgiyvfpaqpihwsyqintfkaaqsayygrsvQfggKgatknypinygrakelavgsefltyivsqkeldlpvwirlgkwsskirveveaiapdqiktasgvyvcnhplnpldcpanqqillynrvvmppsslfsqsqlqgdywqidrntflpqgfhygatt/ttllqtllirtlseqkdyilleyfqtilpaleehfgndqtlaahilnallttwnvmqelefplndierrllclgitlhdyiqeiiniclelgkrlnfdefwadwrdyiaeisylaqwsnagypftikerkldhplrhlltfgdvavhlssphdlvsstmgdrlrdllnrlgiekrfvyhhlrdttgilsnaihnvilrtvqkldwkpllffaqgviyfapqdteiperneikqivwqgisqelgkkmsagdvgfkrdgKglkvspqtsellaaadivrilpqvisvkvnnakspatpkrleklelgdaereklyevadlrcdrlaellglvqkeifllpepfiewvlkdleltsvimpeetqvqsggvnygwyrvaahyvanhatwdleefqeflqgfgdrlatwaeeegyfaehqsptrqifedyldryleiqgwesdhqafiqelenyvnaktkkskqpicslssgefpsedqmdsvvlfkpQqysnknplgggqiKrgiskiwslemllrqafwsvpsgkfedqqpifiylypayvyapqvveairelvygiasvnlwdvrkhwvnnkmdltslkslpwlnqlkytkedlpflatvytttrektdtdawvkpaflalllpyllgvkaiatrsmvplyrsdqdfresihldgvagfwsllgiptdlrveditpalnkllaiytlhlaarssppkarwqdlpktvqevmtdvlnvfalaeqglrrekrdrpyesevteywqfaelfsqgnivmteklkltkrlveeyrrfyqvelskkpsthaillplskaleqilsvpddwdeeelilqgsgqlqaaldrqevytrpiikdksvayetrqlqeleaiqifmttcvrdlfgemckgdrailqeqrnriksgaefayrllaleaqqnqn >7sdp_C:"Winged_helix"_DNA-binding_domain; title=REPLICATION INITIATOR PROTEIN REPE54 AND COGNATE DNA SEQUENCE WITH TERMINAL THREE PRIME PHOSPHATES. organism=ESCHERICHIA COLI DNA sequence DC(B23):DG(A21) DT(B24):DA(A20) DG(B25):DC(A19) DA(B26):DT(A18) DG(B27):DC(A17) DG(B28):DC(A16) DG(B29):DC(A15) DC(B30):DG(A14) DA(B31):DT(A13) DA(B32):DT(A12) DT(B33):DA(A11) DT(B34):DA(A10) DT(B35):DA(A9) DG(B36):DC(A8) DT(B37):DA(A7) DC(B38):DG(A6) DA(B39):DT(A5) DC(B40):DG(A4) DA(B41):DT(A3) DG(B42):DC(A2) DG(B43):DC(A1) chainC ( 61) SER75 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ALA76 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) GLU77 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER79 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) LYS80 0 0 0 0 1 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG83 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG124 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (176) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (178) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 8 2 0 0 (180) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 (181) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 1 0 0 0 0 (184) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 13 0 0 0 0 (185) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 13 15 4 0 0 0 0 0 0 (211) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 prot.sequence krknsprivqsndlteaayslsrdqkrmlylfvdqirksdehdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyrkgyesfpwfikpahspsRglysvhinpylipffiglqnrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdits >7sfc_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HUMAN DNMT1(729-1600) BOUND TO ZEBULARINE-CONTAINING 12MER DSDNA AND INHIBITOR GSK3735967A organism=Homo sapiens DNA sequence DG(C1):DC(D24) DA(C2):DT(D23) DG(C3):DC(D22) DG(C4):DC(D21) DC(C5):DG(D20) 5CM(C6):DG(D19) DG(C7):PYO(D18) DC(C8):DG(D17) DC(C9):DG(D16) DT(C10):DA(D15) DG(C11):DC(D14) DC(C12):DG(D13) chainA (741) CYS1499 0 0 0 0 1 2 0 0 0 0 0 0 (742) LEU1500 0 0 0 0 0 2 0 0 0 0 0 0 (749) HIS1507 0 0 0 0 0 0 6 0 0 0 0 0 (750) ASN1508 0 0 0 0 0 0 0 0 0 2 0 0 (752) TRP1510 0 0 0 0 0 36 0 0 0 0 0 0 (773) GLU1531 0 0 1 0 0 0 0 0 0 0 0 0 (775) MET1533 0 0 0 3 2 0 0 0 0 0 0 0 (777) LYS1535 0 0 0 0 0 4 2 8 0 0 0 0 prot.sequence riswvgeavktdgkksyykkvcidaetlevgdcvsvipddsskplylarvtalwedssngqmfhahwfcagtdtvlgatsdplelflvdecedmqlsyihskvkviykapsenwameggmdpesllegddgktyfyqlwydqdyarfesppktqptednkfkfcvscarlaemrqkeiprvleqledldsrvlyysatkngilyrvgdgvylppeaftfniklsspvkrprkepvdedlypehyrkysdyikgsnldapepyrigrikeifcpkksngrpnetdikirvnkfyrpenthkstpasyhadinllywsdeeavvdfkavqgrctveygedlpecvqvysmggpnrfyfleaynaksksfedppnharsklpklrtldvfsgcgglsegfhqagisdtlwaiemwdpaaqafrlnnpgstvftedcnillklvmagettnsrgqrlpqkgdvemlcggppcqgfsgmnrfnsrtyskfknslvvsflsycdyyrprffllenvrnfvsfkrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapracqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpevrngasaleisyngepqswfqrqlrgaqyqpilrdhickdmsalvaarmrhiplapgsdwrdlpnievrlsdgtmarklrythhdrkngrsssgalrgvcscveagkacdpaarqfntlipwClphtgnrHNhwaglygrlewdgffsttvtnpEpMgKqgrvlhpeqhrvvsvrecarsqgfpdtyrlfgnildkhrqvgnavppplakaigleiklcmlaka >7sfd_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HUMAN DNMT1(729-1600) BOUND TO ZEBULARINE-CONTAINING 12MER DSDNA AND INHIBITOR GSK3543105A organism=Homo sapiens DNA sequence DG(D13):DC(C12) DC(D14):DG(C11) DA(D15):DT(C10) DG(D16):DC(C9) DG(D17):DC(C8) PYO(D18):DG(C7) DG(D19):5CM(C6) DG(D20):DC(C5) DC(D21):DG(C4) DC(D22):DG(C3) DT(D23):DA(C2) chainA (741) CYS1499 0 0 0 0 0 0 1 1 0 0 0 (742) LEU1500 0 0 0 0 0 0 1 0 0 0 0 (749) HIS1507 0 0 0 0 2 10 0 0 0 0 0 (750) ASN1508 0 0 2 0 0 0 0 0 0 0 0 (752) TRP1510 0 0 0 0 0 0 16 0 0 0 0 (755) LEU1513 0 0 0 0 0 0 1 0 0 0 0 (775) MET1533 0 0 0 0 0 0 0 2 2 0 0 (777) LYS1535 0 0 0 0 0 0 4 0 0 0 0 prot.sequence nriswvgeavktdgkksyykkvcidaetlevgdcvsvipddsskplylarvtalwedssngqmfhahwfcagtdtvlgatsdplelflvdecedmqlsyihskvkviykapsenwameggmdpesllegddgktyfyqlwydqdyarfesppktqptednkfkfcvscarlaemrqkeiprvleqledldsrvlyysatkngilyrvgdgvylppeaftfniklsspvkrprkepvdedlypehyrkysdyikgsnldapepyrigrikeifcpkksngrpnetdikirvnkfyrpenthkstpasyhadinllywsdeeavvdfkavqgrctveygedlpecvqvysmggpnrfyfleaynaksksfedppnharklpklrtldvfsgcgglsegfhqagisdtlwaiemwdpaaqafrlnnpgstvftedcnillklvmagettnsrgqrlpqkgdvemlcggppcqgfsgmnrfnsrtyskfknslvvsflsycdyyrprffllenvrnfvsfkrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapracqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpevrngasaleisyngepqswfqrqlrgaqyqpilrdhickdmsalvaarmrhiplapgsdwrdlpnievrlsdgtmarklrythhdrkngrsssgalrgvcscveagkacdpaarqfntlipwClphtgnrHNhwaglygrlewdgffsttvtnpepMgKqgrvlhpeqhrvvsvrecarsqgfpdtyrlfgnildkhrqvgnavppplakaigleiklcmlaka >7sfe_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HUMAN DNMT1(729-1600) BOUND TO ZEBULARINE-CONTAINING 12MER DSDNA AND INHIBITOR GSK3830334A organism=Homo sapiens DNA sequence DG(D13):DC(C12) DC(D14):DG(C11) DA(D15):DT(C10) DG(D16):DC(C9) DG(D17):DC(C8) PYO(D18):DG(C7) DG(D19):5CM(C6) DG(D20):DC(C5) DC(D21):DG(C4) DC(D22):DG(C3) DT(D23):DA(C2) DC(D24):DG(C1) chainA (741) CYS1499 0 0 0 0 0 0 1 1 0 0 0 0 (742) LEU1500 0 0 0 0 0 0 1 0 0 0 0 0 (749) HIS1507 0 0 0 0 0 12 0 0 0 0 0 0 (750) ASN1508 0 0 2 0 0 0 0 0 0 0 0 0 (752) TRP1510 0 0 0 0 0 0 15 0 0 0 0 0 (775) MET1533 0 0 0 0 0 0 0 2 1 0 0 0 (777) LYS1535 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence riswvgeavktdgkksyykkvcidaetlevgdcvsvipddsskplylarvtalwedssngqmfhahwfcagtdtvlgatsdplelflvdecedmqlsyihskvkviykapsenwameggmdpesllegddgktyfyqlwydqdyarfesppktqptednkfkfcvscarlaemrqkeiprvleqledldsrvlyysatkngilyrvgdgvylppeaftfniklsspvkrprkepvdedlypehyrkysdyikgsnldapepyrigrikeifcpkksngrpnetdikirvnkfyrpenthkstpasyhadinllywsdeeavvdfkavqgrctveygedlpecvqvysmggpnrfyfleaynaksksfedppnharsklpklrtldvfsgcgglsegfhqagisdtlwaiemwdpaaqafrlnnpgstvftedcnillklvmagettnsrgqrlpqkgdvemlcggppcqgfsgmnrfnsrtyskfknslvvsflsycdyyrprffllenvrnfvsfkrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapracqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpevrngasaleisyngepqswfqrqlrgaqyqpilrdhickdmsalvaarmrhiplapgsdwrdlpnievrlsdgtmarklrythhdrkngrsssgalrgvcscveagkacdpaarqfntlipwClphtgnrHNhwaglygrlewdgffsttvtnpepMgkqgrvlhpeqhrvvsvrecarsqgfpdtyrlfgnildkhrqvgnavppplakaigleiklcmlaka >7sff_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HUMAN DNMT1(729-1600) BOUND TO ZEBULARINE-CONTAINING 12MER DSDNA AND INHIBITOR GSK3852279B organism=Homo sapiens DNA sequence DG(C1):DC(D24) DA(C2):DT(D23) DG(C3):DC(D22) DG(C4):DC(D21) DC(C5):DG(D20) 5CM(C6):DG(D19) DG(C7):PYO(D18) DC(C8):DG(D17) DC(C9):DG(D16) DT(C10):DA(D15) DG(C11):DC(D14) DC(C12):DG(D13) chainA (741) CYS1499 0 0 0 0 1 2 0 0 0 0 0 0 (742) LEU1500 0 0 0 0 0 2 0 0 0 0 0 0 (749) HIS1507 0 0 0 0 0 0 6 0 0 0 0 0 (750) ASN1508 0 0 0 0 0 0 0 0 0 2 0 0 (752) TRP1510 0 0 0 0 0 28 0 0 0 0 0 0 (775) MET1533 0 0 0 3 2 0 0 0 0 0 0 0 prot.sequence riswvgeavktdgkksyykkvcidaetlevgdcvsvipddsskplylarvtalwedssngqmfhahwfcagtdtvlgatsdplelflvdecedmqlsyihskvkviykapsenwameggmdpesllegddgktyfyqlwydqdyarfesppktqptednkfkfcvscarlaemrqkeiprvleqledldsrvlyysatkngilyrvgdgvylppeaftfniklsspvkrprkepvdedlypehyrkysdyikgsnldapepyrigrikeifcpkksngrpnetdikirvnkfyrpenthkstpasyhadinllywsdeeavvdfkavqgrctveygedlpecvqvysmggpnrfyfleaynaksksfedppnharsklpklrtldvfsgcgglsegfhqagisdtlwaiemwdpaaqafrlnnpgstvftedcnillklvmagettnsrgqrlpqkgdvemlcggppcqgfsgmnrfnsrtyskfknslvvsflsycdyyrprffllenvrnfvsfkrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapracqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpevrngasaleisyngepqswfqrqlrgaqyqpilrdhickdmsalvaarmrhiplapgsdwrdlpnievrlsdgtmarklrythhdrkngrsssgalrgvcscveagkacdpaarqfntlipwClphtgnrHNhwaglygrlewdgffsttvtnpepMgkqgrvlhpeqhrvvsvrecarsqgfpdtyrlfgnildkhrqvgnavppplakaigleiklcmlaka >7sfg_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=HUMAN DNMT1(729-1600) BOUND TO ZEBULARINE-CONTAINING 12MER DSDNA AND COFACTOR SAM organism=Homo sapiens DNA sequence DG(C1):DC(D24) DA(C2):DT(D23) DG(C3):DC(D22) DG(C4):DC(D21) DC(C5):DG(D20) 5CM(C6):DG(D19) DG(C7):PYO(D18) DC(C8):DG(D17) DC(C9):DG(D16) DT(C10):DA(D15) DG(C11):DC(D14) DC(C12):DG(D13) chainA (443) CYS1226 0 0 0 0 0 0 12 0 0 0 0 0 (444) GLN1227 0 0 0 0 0 0 2 0 0 0 0 0 (449) MET1232 0 0 0 0 0 14 0 6 0 0 0 0 (451) ARG1234 0 0 0 0 4 18 14 0 0 0 0 0 (452) PHE1235 0 0 0 0 6 0 0 0 0 0 0 0 (483) GLU1266 0 0 0 0 0 0 6 0 0 0 0 0 (484) ASN1267 0 0 0 0 0 0 1 0 0 0 0 0 (485) VAL1268 0 0 0 0 0 0 3 0 0 0 0 0 (527) ARG1310 0 0 0 0 0 0 5 0 0 0 0 0 (529) ARG1312 0 0 0 0 0 0 8 0 0 0 0 0 (716) CYS1499 0 0 0 0 0 2 0 0 0 0 0 0 (717) LEU1500 0 0 0 0 0 2 0 0 0 0 0 0 (724) HIS1507 0 0 0 0 0 0 2 0 0 0 0 0 (727) TRP1510 0 0 0 0 0 36 0 0 0 0 0 0 (730) LEU1513 0 0 0 0 0 2 0 0 0 0 0 0 (750) MET1533 0 0 0 2 2 0 0 0 0 0 0 0 (752) LYS1535 0 0 0 0 0 26 9 5 0 0 0 0 (753) GLN1536 0 0 0 0 0 0 0 1 0 0 0 0 (795) ASN1578 0 0 0 0 0 0 3 0 0 0 0 0 prot.sequence riswvgeavktdgkksyykkvcidaetlevgdcvsvipddsskplylarvtalwedssngqmfhahwfcagtdtvlgatsdplelflvdecedmqlsyihskvkviykapsenwameggmdktyfyqlwydqdyarfesppktqpnkfkfcvscarlaemrqkeiprvleqledldsrvlyysatkngilyrvgdgvylppeaftfnikpvdedlypehyrkysdyikgsnldapepyrigrikeifcpkksngrpnetdikirvnkfyrpenthkstpasyhadinllywsdeeavvdfkavqgrctveygedlpecvqvysmggpnrfyfleaynaksksfedppnharklpklrtldvfsgcgglsegfhqagisdtlwaiemwdpaaqafrlnnpgstvftedcnillklvmagettnsrgqrlpqkgdvemlcggppcqgfsgMnRFnsrtyskfknslvvsflsycdyyrprffllenvrnfvsfkrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapracqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpevrngasaleisyngepqswfqrqlrgaqyqpilrdhickdmsalvaarmrhiplapgsdwrdlpnievrlsdgtmarklrythhdrkngrsssgalrgvcscveagkacdpaarqfntlipwclphtgnrHnhwaglygrlewdgffsttvtnpEpMgKQgrvlhpeqhrvvsvrecarsqgfpdtyrlfgnildkhrqvgnavppplakaigleiklcmlaka >7sgc_C:"Winged_helix"_DNA-binding_domain; title=REPLICATION INITIATOR PROTEIN REPE54 AND COGNATE DNA SEQUENCE WITH TERMINAL FIVE PRIME PHOSPHATES. organism=ESCHERICHIA COLI DNA sequence DC(B23):DG(A21) DT(B24):DA(A20) DG(B25):DC(A19) DA(B26):DT(A18) DG(B27):DC(A17) DG(B28):DC(A16) DG(B29):DC(A15) DC(B30):DG(A14) DA(B31):DT(A13) DA(B32):DT(A12) DT(B33):DA(A11) DT(B34):DA(A10) DT(B35):DA(A9) DG(B36):DC(A8) DT(B37):DA(A7) DC(B38):DG(A6) DA(B39):DT(A5) DC(B40):DG(A4) DA(B41):DT(A3) DG(B42):DC(A2) DG(B43):DC(A1) chainC ( 60) SER75 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ALA76 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLU77 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER79 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS80 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG83 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ARG124 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (174) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (176) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 6 1 0 0 (178) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 (179) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 1 0 0 0 0 (182) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 13 0 0 0 0 (183) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 10 15 5 0 0 0 0 0 0 (209) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 prot.sequence krknsprivqsndlteaayslsrdqkrmlylfvdqirksehdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfykgyesfpwfikpahspsRglysvhinpylipffiglqnrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdits >7sgl_ABD: title=DNA-PK COMPLEX OF DNA END PROCESSING organism=HOMO SAPIENS DNA sequence DT(E1):DA(E46) DC(E2):DG(E45) DA(E3):DT(E44) DG(E4):DC(E43) DA(E5):DT(E42) DA(E6):DT(E41) DG(E7):DC(E40) DC(E8):DG(E39) DA(E9):DT(E38) DG(E10):DC(E37) DT(E11):DA(E36) DA(E12):DT(E35) DG(E13):DC(E34) DA(E14):DT(E33) DG(E15):DC(E32) DC(E16):DG(E31) DA(E17):DT(E30) DT(E18):DA(E29) DG(E19):DC(E28) DC(E20):DG(E27) DA(E21):DT(E26) chainA (264) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainB (225) ARG254 0 0 0 0 0 0 0 0 0 3 6 2 0 0 0 0 0 0 0 0 0 chainD ( 1) MET1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 36) LYS36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence magsgagvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpkgpesesedhrasgevrtgkwkvptykdyvdlfrhllssdqmmdsiladeaffsvnssseslnhllydefvksvlkivekldltleidpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegvsdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktnwevsalsraaaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcfgtgaagnrtspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgderqclpsldlsckqlasgllelafafgglcerlvslllnpavlstsvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevevpmerkkkyieirkeareaangdsdgpsymsslsyladstlseemsqfdfstgvqsysyssqlemdelnrhecmapltalvkhmhrsprdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltpmfveqasqgpvagqiraqqqhdflqtqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrllpalppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltedisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgsssedsekviaglyqrafqhlseavqaaeeeaqppswscgpaagvidaymtladfcdqqlrkeeenasvidsaelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/ykysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdynp/MssfegqmaeyptisidrfdrenlrarayflshchKdhmkglraptlkrrlecslkvylycspvtkellltspkyrfwkkriisieietptqislvdeasgekeeivvtllpaghcpgsvmflfqgnngtvlytgdfrlaqgeaarmellhsggrvkdiqsvyldttfcdprfyqipsreeclsgvlelvrswitrspyhvvwlnckaaygyeylftnlseelgvqvhvnkldmfrnmpeilhhlttdrntqihacrhpkaeeyfqwsklpcgitsrnriplhiisikpstmwfgersrktnvivrtgessyracfsfhssyseikdflsylcpvnaypnvipvgttmdkvveilkplcrssqstepkykplgklkrartvhrdseeeddylfddplpiplrhkvp >7sgl_D:Metallo-hydrolase/oxidoreductase; title=DNA-PK COMPLEX OF DNA END PROCESSING organism=HOMO SAPIENS DNA sequence DT(E1):DA(E46) DC(E2):DG(E45) DA(E3):DT(E44) DG(E4):DC(E43) DA(E5):DT(E42) DA(E6):DT(E41) DG(E7):DC(E40) DC(E8):DG(E39) DA(E9):DT(E38) DG(E10):DC(E37) DT(E11):DA(E36) DA(E12):DT(E35) DG(E13):DC(E34) DA(E14):DT(E33) DG(E15):DC(E32) DC(E16):DG(E31) DA(E17):DT(E30) DT(E18):DA(E29) DG(E19):DC(E28) DC(E20):DG(E27) DA(E21):DT(E26) chainD ( 1) MET1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 36) LYS36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence MssfegqmaeyptisidrfdrenlrarayflshchKdhmkglraptlkrrlecslkvylycspvtkellltspkyrfwkkriisieietptqislvdeasgekeeivvtllpaghcpgsvmflfqgnngtvlytgdfrlaqgeaarmellhsggrvkdiqsvyldttfcdprfyqipsreeclsgvlelvrswitrspyhvvwlnckaaygyeylftnlseelgvqvhvnkldmfrnmpeilhhlttdrntqihacrhpkaeeyfqwsklpcgitsrnriplhiisikpstmwfgersrktnvivrtgessyracfsfhssyseikdflsylcpvnaypnvipvgttmdkvveilkplcrssqstepkykplgklkrartvhrdseeeddylfddplpiplrhkvp >7sgz_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF THE YEAST RAD24-RFC LOADER BOUND TO DNA AND THE CLOSED 9- 1-1 CLAMP organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(T21):DA(P10) DA(T22):DT(P9) DG(T23):DC(P8) DT(T24):DA(P7) DG(T25):DC(P6) DT(T26):DA(P5) DC(T27):DG(P4) DT(T28):DA(P3) DG(T29):DC(P2) DC(T30):DG(P1) chainA (263) PHE340 0 0 0 0 0 0 0 0 0 30 (264) HIS341 0 0 0 0 0 0 0 0 0 9 (364) VAL441 0 0 0 0 0 0 0 0 0 6 prot.sequence geqwyekfkpncleqvaihkrklkdvqealdamflpnakhrilllsgpsgcskstvikelskilvpkyhkvtefrgdcivndlpqmesfseflkgarylvmsnlsliliedlpnvfhidtrrrfqqlilqwlyssepllpplviciteceipendnnyrkfgidytfsaetimnkeilmhprlkrikfnpinstllkkhlkficvqnmkmlkeknkwnkrqevidyiaqetgdirsaittlqfwatssgslpistrestisyFHaigkvihgshstnndneminnlfensnnllskedfklgilenyntfnkgefsisdassivdclsecdnmnglpesneyglrevrktfrniskqghnhgtVyfprewkvrklqnsfkvqaedwlnvslykynavhsfrnitlefgyyaplirkcq >7sh2_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF THE YEAST RAD24-RFC LOADER BOUND TO DNA AND THE OPEN 9-1- 1 CLAMP organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(T21):DA(P10) DA(T22):DT(P9) DG(T23):DC(P8) DT(T24):DA(P7) DG(T25):DC(P6) DT(T26):DA(P5) DC(T27):DG(P4) DT(T28):DA(P3) DG(T29):DC(P2) DC(T30):DG(P1) chainA (250) PHE340 0 0 0 0 0 0 0 0 0 27 (251) HIS341 0 0 0 0 0 0 0 0 0 21 (255) LYS345 0 0 0 0 0 0 0 0 0 1 (258) HIS348 0 0 0 0 0 0 0 0 0 3 (351) VAL441 0 0 0 0 0 0 0 0 0 2 prot.sequence geqwyekfkpncleqvaihkrklkdvqealdamflpnakhrilllsgpsgcskstvikelskilvpkyhkvtefrgqmesfseflkgarylvmsnlsliliedlpnvfhidtrrrfqqlilqwlyssepllpplviciteceipenkfgidytfsaetimnkeilmhprlkrikfnpinstllkkhlkficvqnmkmlkeknkwnkrqevidyiaqetgdirsaittlqfwatssgslpistrestisyFHaigKviHgshstnndneminnlfensnnllskedfklgilenyntfnkgefsisdassivdclsecdnmnglpesneyglrevrktfrniskqghnhgtVyfprewkvrklqnsfkvqaedwlnvslykynavhsfrnitlefgyyaplirkcq >7sjr_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF ADNA-ADNB(W325A) IN COMPLEX WITH DNA AND AMPPNP organism=MYCOLICIBACTERIUM SMEGMATIS DNA sequence DT(C58) DG(C57) DT(C56) DT(C55) DT(C54) DT(C53) DA(C52) DT(C2) DT(C3) DT(C4):DA(C52) DC(C5):DG(C51) DT(C6):DA(C50) DA(C7):DT(C49) DA(C8):DT(C48) DT(C9):DA(C47) DG(C10):DC(C46) DC(C11):DG(C45) DG(C12) DA(C13):DC(C44) DT(C43) DG(C14):DC(C42) DC(C15):DG(C41) DA(C16):DT(C40) chainA (710) ARG825 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (711) SER826 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (819) SER940 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (901) ASN1029 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence llepgsngvvrllggpgtgkssllvdtavqhdpesvllltgsarlrtaaraaitarlgvvreplvrtvhsyafavlrlaaqtsaeqdgiirellagdledgwpeqlwpalttagfatelrdlmarctergvdpialqrlgrtakrpewlaagrfaqayeqimlaaelvgaalealgaddelldternriklllvddaqhldpqaarlvralaagtgltviagdpdqsvfvllrddthpaitltqsyrcapeiasaitglgqrltrhwtgnpqregtvtvrlaasthaegtmiadalrrahlvdgipwsqmavivrsvpgtalaraltaagvpvqdvpvgrqpaaaalltvldvtatghldadsavalltgpigrvdpvtlrqlrralrradgsqpprdfgdllvdaierepkglsaehartlrrlravltaarrsdarytlwqawhasglqrrwlaaservgaqadrdldavttlfdvadqyvnrlrglvdhvtraeavavlsvhgalagewdfvviagvqeglwpnmiprggvlgtqhlvdvldgvadmtdrtvstraplvaeerrllmaamgrartrvmitavdsdtgllpspfcaeisawatepplvaprvlapsalvgrlravvcapavdddaracaaaqlarlaaagvpgadpsqwhamtsltteeplwsehvvtlspstlqmltdcplrwllerhggddgrdvRStvgslvhalvseptesqlvnelekvwddlpydakwysdnelarhramletftrwredtrrqltevateipvegivveppgvrvrgrldrlerdeagrlvvvdlktgkSpvtkddaqnhaqlamyqlavaagllddepgggklvylgkatereqdpltpdkraewletvgeaaaatagprfvarvnngcaNcpvrsscpaq >7sjr_AB:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF ADNA-ADNB(W325A) IN COMPLEX WITH DNA AND AMPPNP organism=MYCOLICIBACTERIUM SMEGMATIS DNA sequence DT(C58) DG(C57) DT(C56) DT(C55) DT(C54) DT(C53) DA(C52) DT(C2) DT(C3) DT(C4):DA(C52) DC(C5):DG(C51) DT(C6):DA(C50) DA(C7):DT(C49) DA(C8):DT(C48) DT(C9):DA(C47) DG(C10):DC(C46) DC(C11):DG(C45) DG(C12) DA(C13):DC(C44) DT(C43) DG(C14):DC(C42) DC(C15):DG(C41) DA(C16):DT(C40) chainB ( 68) PHE79 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG81 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) HIS120 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) LEU142 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) ARG214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (230) PHE254 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) TYR323 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ARG436 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (620) HIS665 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (693) ARG746 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (710) ARG825 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (711) SER826 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (819) SER940 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (901) ASN1029 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence llepgsngvvrllggpgtgkssllvdtavqhdpesvllltgsarlrtaaraaitarlgvvreplvrtvhsyafavlrlaaqtsaeqdgiirellagdledgwpeqlwpalttagfatelrdlmarctergvdpialqrlgrtakrpewlaagrfaqayeqimlaaelvgaalealgaddelldternriklllvddaqhldpqaarlvralaagtgltviagdpdqsvfvllrddthpaitltqsyrcapeiasaitglgqrltrhwtgnpqregtvtvrlaasthaegtmiadalrrahlvdgipwsqmavivrsvpgtalaraltaagvpvqdvpvgrqpaaaalltvldvtatghldadsavalltgpigrvdpvtlrqlrralrradgsqpprdfgdllvdaierepkglsaehartlrrlravltaarrsdarytlwqawhasglqrrwlaaservgaqadrdldavttlfdvadqyvnrlrglvdhvtraeavavlsvhgalagewdfvviagvqeglwpnmiprggvlgtqhlvdvldgvadmtdrtvstraplvaeerrllmaamgrartrvmitavdsdtgllpspfcaeisawatepplvaprvlapsalvgrlravvcapavdddaracaaaqlarlaaagvpgadpsqwhamtsltteeplwsehvvtlspstlqmltdcplrwllerhggddgrdvRStvgslvhalvseptesqlvnelekvwddlpydakwysdnelarhramletftrwredtrrqltevateipvegivveppgvrvrgrldrlerdeagrlvvvdlktgkSpvtkddaqnhaqlamyqlavaagllddepgggklvylgkatereqdpltpdkraewletvgeaaaatagprfvarvnngcaNcpvrsscpaq/ryspvelsaalglfpptdeqaaviaappgplvviagagagktetmaarvvwlvangfatpsqvlgltFtRkaagqllrrvrtrlarlagagsdesatvstyHafagtllrehglllpvepdtrLlsetelwqlaydvvcahpghldtektpaavtamvlrlsgalaehlvdtdqlrdthvelerlvhtqRdrgpsqwllrmlatqtertelvplidalhqrmraekvmdFgmqmaaaarlaarfpqvgeqlrqrfrvvlldeyqdtghaqrialsslfgggaddglaltavgdpiqsiYgtnlprfttdfpysdgtpaptlelrtswrnppstlhvanavseealrprpdaepgtircallnnvaaerdwvadhlarayhgaigrgeaaptaavlvRrnadaapmaealtargvpvevagllavpevadlvamlrliadptagsavmriltgprwrfgardiaalwrravelddrplgtadivaqaapdadtacvadaicdpgdaeryspagyerivalgreltmlrahlghplpelvaevrrvlgldaearaarpvaagwagtenldrfsdlvsdfaghagasvsallayldaavevenglapaeltvshdrvqiltvHaakglewqvvavphlsarvfpsttqartwltdasdlppllrgdrateseigvpvrkilsdkisdhkksldqrRvdeerrllyvaitraedtlllsghhwgateskprgpseflcelktileeatcgeiehwapdpplrdqvvealwppvdhvhrgaqlvaaamagqegwaadvdallaerer >7soz_C:"Winged_helix"_DNA-binding_domain; title=REPLICATION INITIATOR PROTEIN REPE54 AND COGNATE DNA SEQUENCE WITH TERMINAL THREE PRIME PHOSPHATES CHEMICALLY CROSSLINKED (5 MG/ML EDC, 12 HOURS). organism=Escherichia coli DNA sequence DC(A1):DG(B43) DC(A2):DG(B42) DT(A3):DA(B41) DG(A4):DC(B40) DT(A5):DA(B39) DG(A6):DC(B38) DA(A7):DT(B37) DC(A8):DG(B36) DA(A9):DT(B35) DA(A10):DT(B34) DA(A11):DT(B33) DT(A12):DA(B32) DT(A13):DA(B31) DG(A14):DC(B30) DC(A15):DG(B29) DC(A16):DG(B28) DC(A17):DG(B27) DT(A18):DA(B26) DC(A19):DG(B25) DA(A20):DT(B24) DG(A21):DC(B23) chainC ( 60) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 61) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 ( 62) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 0 ( 64) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 65) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 ( 68) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (101) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 (174) SER197 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) TYR198 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG200 0 0 0 9 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) PRO202 0 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ASP203 0 0 0 0 1 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ARG206 0 0 0 0 17 15 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ARG207 0 0 0 0 0 0 3 14 8 0 0 0 0 0 0 0 0 0 0 0 0 (210) ARG233 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rknsprivqsndlteaayslsrdqkrmlylfvdqirksdehdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyrkgyesfpwfikpahspsRglysvhinpylipffiglqnrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdits >7spm_C:"Winged_helix"_DNA-binding_domain; title=REPLICATION INITIATOR PROTEIN REPE54 AND COGNATE DNA SEQUENCE WITH TERMINAL THREE PRIME PHOSPHATES CHEMICALLY CROSSLINKED (30 MG/ML EDC, 12 HOURS, 2 DOSES). organism=Escherichia coli DNA sequence DC(B23):DG(A21) DT(B24):DA(A20) DG(B25):DC(A19) DA(B26):DT(A18) DG(B27):DC(A17) DG(B28):DC(A16) DG(B29):DC(A15) DC(B30):DG(A14) DA(B31):DT(A13) DA(B32):DT(A12) DT(B33):DA(A11) DT(B34):DA(A10) DT(B35):DA(A9) DG(B36):DC(A8) DT(B37):DA(A7) DC(B38):DG(A6) DA(B39):DT(A5) DC(B40):DG(A4) DA(B41):DT(A3) DG(B42):DC(A2) DG(B43):DC(A1) chainC ( 58) SER75 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ALA76 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) GLU77 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) SER79 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) LYS80 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG83 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) ARG124 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (172) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (174) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 10 6 0 0 (176) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 (177) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 2 0 0 0 0 (180) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 14 0 0 0 0 (181) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 6 10 4 0 0 0 0 0 0 (207) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 prot.sequence nsprivqsndlteaayslsrdqkrmlylfvdqirksdehdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfykgyesfpwfikpahspsRglysvhinpylipffiglqnrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdits >7sr6_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=HUMAN ENDOGENOUS RETROVIRUS (HERV-K) REVERSE TRANSCRIPTASE TERNARY COMPLEX WITH DSDNA TEMPLATE PRIMER AND DNTP organism=? DNA sequence DA(D5):DT(E23) DC(D6):DG(E22) DC(D7):DG(E21) DT(D8):DA(E20) DG(D9):DC(E19) DA(D10):DT(E18) DA(D11):DT(E17) DA(D12):DT(E16) DG(D13):DC(E15) DC(D14):DG(E14) DG(D15):DC(E13) DA(D16):DT(E12) DA(D17):DT(E11) DA(D18):DT(E10) DG(D19):DC(E9) DG(D20):DC(E8) DG(D21):DC(E7) DA(D22):DT(E6) DA(D23):DT(E5) DA(D24):DT(E4) chainA (148) PRO168 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) TYR194 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ILE195 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ASN275 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (417) LYS436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 prot.sequence kpipltwktekpvwvnqwplpkqklealhllaneqlekghiepsfspwnspvfviqkksgkwrmltdlravnaliqpmgplqpglpspamipkdwpliiidlkdcfftiplaeqdcekfaftipainnkepatrfqwkvlpqgmlnsPticqtfvgralqpvrekfsdcyiihYIddilcaaetkdklidcytflqaevanaglaiasdkiqtstpfhylgmqienrkikpqkieirkdtlktlndfqkllgdiNwirptlgiptyamsnlfsilrgdsdlnskriltpeatkeiklveekiqsaqinrigplaplqllifatahsptgiiiqntdlvewsflphstvktftlyldqiatligqtrlritklcgndpdkivvpltkeqvrqafinsgawqiglanfvgiidnhypktkifqflklttwilpkitrceplenaltvftdgssngkaaytgpkerviktpyqsaqraelvavitvlqdfdqpiniisdsayvvqatrdvetalikysmddqlnqlfnllqqtvrkrnfpfyithirahtnlpgpltkaneqadllvss/pkpipltwktekpvwvnqwplpkqklealhllaneqlekghiepsfspwnspvfviqkksgkwrmltdlravnaliqpmgplqpglpspamipkdwpliiidlkdcfftiplaeqdcekfaftipainnkepatrfqwkvlpqgmlnspticqtfvgralqpvrekfsdcyiihyiddilcaaetkdklidcytflqaevanaglaiasdkiqtstpfhylgmqienrkikpqkieirkdtlktlndfqkllgdinwirptlgiptyamsnlfsilrgdsdlnskriltpeatkeiklveekiqsaqinrigplaplqllifatahsptgiiiqntdlvewsflphstvktftlyldqiatligqtrlritklcgndpdkivvpltkeqvrqafinsgawqiglanfvgiidnhypKtkifqflklttwilp >7sr6_F:DNA/RNA_polymerases;Ribonuclease_H-like; title=HUMAN ENDOGENOUS RETROVIRUS (HERV-K) REVERSE TRANSCRIPTASE TERNARY COMPLEX WITH DSDNA TEMPLATE PRIMER AND DNTP organism=? DNA sequence DG(I3):DC(H25) DT(I4):DA(H24) DT(I5):DA(H23) DT(I6):DA(H22) DC(I7):DG(H21) DC(I8):DG(H20) DC(I9):DG(H19) DT(I10):DA(H18) DT(I11):DA(H17) DT(I12):DA(H16) DC(I13):DG(H15) DG(I14):DC(H14) DC(I15):DG(H13) DT(I16):DA(H12) DT(I17):DA(H11) DT(I18):DA(H10) DC(I19):DG(H9) DA(I20):DT(H8) DG(I21):DC(H7) DG(I22):DC(H6) chainF (148) PRO168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (174) TYR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 (248) GLN268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (255) ASN275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 (348) VAL368 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (513) LYS533 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 prot.sequence kpipltwktekpvwvnqwplpkqklealhllaneqlekghiepsfspwnspvfviqkksgkwrmltdlravnaliqpmgplqpglpspamipkdwpliiidlkdcfftiplaeqdcekfaftipainnkepatrfqwkvlpqgmlnsPticqtfvgralqpvrekfsdcyiihYiddilcaaetkdklidcytflqaevanaglaiasdkiqtstpfhylgmqienrkikpqkieirkdtlktlndfQkllgdiNwirptlgiptyamsnlfsilrgdsdlnskriltpeatkeiklveekiqsaqinrigplaplqllifatahsptgiiiqntdlvewsflphstVktftlyldqiatligqtrlritklcgndpdkivvpltkeqvrqafinsgawqiglanfvgiidnhypktkifqflklttwilpkitrceplenaltvftdgssngkaaytgpkerviktpyqsaqraelvavitvlqdfdqpiniisdsayvvqatrdvetaliKysmddqlnqlfnllqqtvrkrnfpfyithirahtnlpgpltkaneqadllvss >7sr6_FG:DNA/RNA_polymerases;Ribonuclease_H-like; title=HUMAN ENDOGENOUS RETROVIRUS (HERV-K) REVERSE TRANSCRIPTASE TERNARY COMPLEX WITH DSDNA TEMPLATE PRIMER AND DNTP organism=? DNA sequence DG(I3):DC(H25) DT(I4):DA(H24) DT(I5):DA(H23) DT(I6):DA(H22) DC(I7):DG(H21) DC(I8):DG(H20) DC(I9):DG(H19) DT(I10):DA(H18) DT(I11):DA(H17) DT(I12):DA(H16) DC(I13):DG(H15) DG(I14):DC(H14) DC(I15):DG(H13) DT(I16):DA(H12) DT(I17):DA(H11) DT(I18):DA(H10) DC(I19):DG(H9) DA(I20):DT(H8) DG(I21):DC(H7) DG(I22):DC(H6) chainF (148) PRO168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (174) TYR194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 (248) GLN268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (255) ASN275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 (348) VAL368 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (513) LYS533 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 chainG prot.sequence kpipltwktekpvwvnqwplpkqklealhllaneqlekghiepsfspwnspvfviqkksgkwrmltdlravnaliqpmgplqpglpspamipkdwpliiidlkdcfftiplaeqdcekfaftipainnkepatrfqwkvlpqgmlnsPticqtfvgralqpvrekfsdcyiihYiddilcaaetkdklidcytflqaevanaglaiasdkiqtstpfhylgmqienrkikpqkieirkdtlktlndfQkllgdiNwirptlgiptyamsnlfsilrgdsdlnskriltpeatkeiklveekiqsaqinrigplaplqllifatahsptgiiiqntdlvewsflphstVktftlyldqiatligqtrlritklcgndpdkivvpltkeqvrqafinsgawqiglanfvgiidnhypktkifqflklttwilpkitrceplenaltvftdgssngkaaytgpkerviktpyqsaqraelvavitvlqdfdqpiniisdsayvvqatrdvetaliKysmddqlnqlfnllqqtvrkrnfpfyithirahtnlpgpltkaneqadllvss/pkpipltwktekpvwvnqwplpkqklealhllaneqlekghiepsfspwnspvfviqkksgkwrmltdlravnaliqpmgplqpglpspamipkdwpliiidlkdcfftiplaeqdcekfaftipainnkepatrfqwkvlpqgmlnSpticqtfvgralqpvrekfsdcyiiHyiddilcaaetkdklidcytflqaevanaglaiasdkiqtstpfhylgmqienrkikpqkieirkdtlktlndFqkllgdInwirptlgiptyamsnlfsilrgdsdlnskriltpeatkeiklveekiqsaqinrigplaplqllifatahsptgiiiqntdlvewsflphsTvktftlyldqiatligqtrlritklcgndpdkivvpltkeqvrqafinsgawqiglanfvgiidnhypktkifqflklttwilp >7ss5_A:Restriction_endonuclease-like; title=ACTIVATED SGRAI ENDONUCLEASE DNA-BOUND DIMER WITH CA2+ AND INTACT PRIMARY SITE DNA organism=Streptomyces griseus DNA sequence DG(D2):DC(C25) DG(D3):DC(C24) DT(D4):DA(C23) DC(D5):DG(C22) DT(D6):DA(C21) DT(D7):DA(C20) DC(D8):DG(C19) DA(D9):DT(C18) DC(D10):DG(C17) DA(D11):DT(C16) DC(D12):DG(C15) DC(D13):DG(C14) DG(D14):DC(C13) DG(D15):DC(C12) DT(D16):DA(C11) DG(D17):DC(C10) DT(D18):DA(C9) DG(D19):DC(C8) DA(D20):DT(C7) DA(D21):DT(C6) DG(D22):DC(C5) DA(D23):DT(C4) DC(D24):DG(C3) DC(D25):DG(C2) chainA ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 12 1 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 0 0 0 0 10 14 0 0 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 10 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 0 4 16 22 0 0 0 0 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 0 4 12 5 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 0 0 0 14 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfqlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakaKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrslRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng >7ss5_AB:Restriction_endonuclease-like; title=ACTIVATED SGRAI ENDONUCLEASE DNA-BOUND DIMER WITH CA2+ AND INTACT PRIMARY SITE DNA organism=Streptomyces griseus DNA sequence DG(D2):DC(C25) DG(D3):DC(C24) DT(D4):DA(C23) DC(D5):DG(C22) DT(D6):DA(C21) DT(D7):DA(C20) DC(D8):DG(C19) DA(D9):DT(C18) DC(D10):DG(C17) DA(D11):DT(C16) DC(D12):DG(C15) DC(D13):DG(C14) DG(D14):DC(C13) DG(D15):DC(C12) DT(D16):DA(C11) DG(D17):DC(C10) DT(D18):DA(C9) DG(D19):DC(C8) DA(D20):DT(C7) DA(D21):DT(C6) DG(D22):DC(C5) DA(D23):DT(C4) DC(D24):DG(C3) DC(D25):DG(C2) chainA ( 30) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 12 1 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 0 0 0 0 10 14 0 0 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 10 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 0 4 16 22 0 0 0 0 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 0 4 12 5 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 0 0 0 14 9 0 0 0 0 0 0 0 0 0 0 0 chainB ( 30) ARG31 0 0 0 0 0 0 0 1 12 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ASN92 0 0 0 0 0 0 0 0 0 0 14 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) LYS96 0 0 0 0 0 0 0 0 9 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ARG152 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) ARG246 0 0 0 0 0 0 0 0 0 0 0 0 22 16 4 0 0 0 0 0 0 0 0 0 (246) SER247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 (247) ASP248 0 0 0 0 0 0 0 0 0 0 0 0 5 12 4 0 0 0 0 0 0 0 0 0 (248) ARG249 0 0 0 0 0 0 0 0 0 0 0 9 14 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pftysieatrnlatterciqdirnapvrnRstqfqlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakaKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrslRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng/pftysieatrnlatterciqdirnapvrnRstqfqlaqqnmlaytfgevipgfasagingmdyrdvigrpvenavtegthffrddfrvdsNakaKvagdifeivssavmwncaarwnslmvgegwrsqprysrptlspsprrqvavlnlpRsfdwvsllvpesqevieefraglrkdglglptstpdlavvvlpeefqndemwreeiagltrpnqillsgayqrlqgrvqpgeislavafkrslRSDRlyqplyeanvmqlllegklgapkvefevhtlapegtnafvtyeaaslyglaegrsavhrairelyvpptaadlarrffaflnermelvng >7ssa_L:HLH,_helix-loop-helix_DNA-binding_domain; title=CRYO-EM STRUCTURE OF PIONEER FACTOR CBF1 BOUND TO THE NUCLEOSOME organism=? DNA sequence DC(J-72):DG(I72) DA(J-71):DT(I71) DG(J-70):DC(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DG(J-54):DC(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DG(J55):DC(I-55) DG(J56):DC(I-56) DT(J57):DA(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DG(J61):DC(I-61) DT(J62):DA(I-62) DG(J63):DC(I-63) DA(J64):DT(I-64) chainL ( 6) HIS227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 3 0 0 0 0 0 0 ( 7) LYS228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 10) GLU231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 13 0 0 0 0 0 ( 13) ARG234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 ( 14) ARG235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 ( 35) LYS256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 prot.sequence qrkdsHKevErrRRenintainvlsdllpvressKaailacaaeyiqklketdeaniekwtlqklls >7st9_BCDE: title=OPEN STATE OF RAD24-RFC:9-1-1 BOUND TO A 5' SS/DSDNA JUNCTION organism=? DNA sequence DG(J11) DG(J12) DA(J13) DA(J14) DG(J15) DG(J16) DA(J17) DG(J18) DC(J19) DG(J20) DT(J21) DT(J22) DT(J23) DT(J24) DT(J25) DT(J26) DT(J27) DT(J28) DT(J29) DT(J30) DT(J31) DT(J32) DT(J33) DT(J34) DT(J35) chainB chainC chainD chainE ( 78) ALA78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 79) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 81) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 prot.sequence lqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnqsnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnn/skenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahkltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfen/eqslaqqpwvekyrpknldevtaqdhavtvlkktlksanlphmlfygppgtgktstilaltkelygpdlmksrilelnasdergisivrekvknfarltvskpskhdlenypcppykiiildeadsmtadaqsalrrtmetysgvtrfclicnyvtriidplasrcskfrfkaldasnaidrlrfiseqenvkcddgvlerildisagdlrrgitllqsaskgaqylgdgknitstqveelagvvphdilieivekvksgdfdeikkyvntfmksgwsaasvvnqlheyyitndnfdtnfknqiswllfttdsrlnngtnehiqllnllvkisql/mslwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtASnRklelnvvsspyhleitpsdmgnndriviqellkevaqmeqvdfqdskdglahrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgnkaifhlegfiakvmccld >7stb_BCDE: title=CLOSED STATE OF RAD24-RFC:9-1-1 BOUND TO A 5' SS/DSDNA JUNCTION organism=? DNA sequence DG(J11) DG(J12) DA(J13) DA(J14) DG(J15) DG(J16) DA(J17) DG(J18) DC(J19) DG(J20) DT(J21) DT(J22) DT(J23) DT(J24) DT(J25) DT(J26) DT(J27) DT(J28) DT(J29) DT(J30) DT(J31) DT(J32) DT(J33) DT(J34) DT(J35) chainB chainC chainD chainE ( 78) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 80) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 prot.sequence lqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnqsnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnn/skenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahkltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenet/slaqqpwvekyrpknldevtaqdhavtvlkktlksanlphmlfygppgtgktstilaltkelygpdlmksrilelnasdergisivrekvknfarltvskpskhdlenypcppykiiildeadsmtadaqsalrrtmetysgvtrfclicnyvtriidplasrcskfrfkaldasnaidrlrfiseqenvkcddgvlerildisagdlrrgitllqsaskgaqylgdgknitstqveelagvvphdilieivekvksgdfdeikkyvntfmksgwsaasvvnqlheyyitndnfdtnfknqiswllfttdsrlnngtnehiqllnllvkisql/slwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtaSnRklelnvvsspyhleitpsdmgnndriviqellkevaqmeqhrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgnkaifhlegfiakvmccld >7su3_ABC: title=CRYOEM STRUCTURE OF DNA-PK COMPLEX VII organism=HOMO SAPIENS DNA sequence DC(F6):DG(E35) DT(F7):DA(E34) DC(F8):DG(E33) DT(F9):DA(E32) DA(F10):DT(E31) DC(F11):DG(E30) DT(F12):DA(E29) DG(F13):DC(E28) DC(F14):DG(E27) DT(F15):DA(E26) DT(F16):DA(E25) DC(F17):DG(D24) DG(F18):DC(D23) DA(F19):DT(D22) DT(F20):DA(D21) DA(F21):DT(D20) DT(F22):DA(D19) DC(F23):DG(D18) DG(F24):DC(D17) DA(G25):DT(D16) DA(G26):DT(D15) DG(G27):DC(D14) DC(G28):DG(D13) DA(G29):DT(D12) DG(G30):DC(D11) DT(G31):DA(D10) DA(G32):DT(D9) DG(G33):DC(D8) DA(G34):DT(D7) DG(G35):DC(D6) DC(G36):DG(D5) DA(G37):DT(D4) DT(G38):DA(D3) DG(G39):DC(D2) chainA (258) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 (2465) GLN2736 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 5 (2468) LEU2739 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (2469) SER2740 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 (2472) TYR2743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 (2473) ALA2744 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 chainB (216) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 13 0 0 0 0 0 0 0 0 0 0 0 0 (365) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvwkvptykdyvdlfrhllssdqmmdsilaeslnhllydefvksvlkivekldltleiqaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegvdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsalsdetknnwevsalsraaqkgfnkvvlkhlkktknlssneaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgqclpsldlsckqlasgllelafafgglcerlvslllnpavlstavihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevevpmerkelemdelnrhecmapltalvkhmhrslprdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltpmfvetqrssfdwltgsssdsllfahaagrtdllrlrrrfmrdQekLSlmYArkgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltdisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgsssedsekviaglyqrafqhlseavqaaeeaagvidaymtladfcdqqlrkeeenasvidsaelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/kysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeifqdnhsvsslaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkfladvddlldmi >7su3_C:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=CRYOEM STRUCTURE OF DNA-PK COMPLEX VII organism=HOMO SAPIENS DNA sequence DC(D2):DG(G39) DA(D3):DT(G38) DT(D4):DA(G37) DG(D5):DC(G36) DC(D6):DG(G35) DT(D7):DA(G34) DC(D8):DG(G33) DT(D9):DA(G32) DA(D10):DT(G31) DC(D11):DG(G30) DT(D12):DA(G29) DG(D13):DC(G28) DC(D14):DG(G27) DT(D15):DA(G26) DT(D16):DA(G25) DC(D17):DG(F24) DG(D18):DC(F23) DA(D19):DT(F22) DT(D20):DA(F21) DA(D21):DT(F20) DT(D22):DA(F19) DC(D23):DG(F18) DG(D24):DC(F17) DA(E25):DT(F16) DA(E26):DT(F15) DG(E27):DC(F14) DC(E28):DG(F13) DA(E29):DT(F12) DG(E30):DC(F11) DT(E31):DA(F10) DA(E32):DT(F9) DG(E33):DC(F8) DA(E34):DT(F7) DG(E35):DC(F6) chainC (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeifqdnhsvsslaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkfladvddlldmi >7sum_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF HUMAN LIGASE I WITH NICK DUPLEXES CONTAINING COGNATE A:T organism=Homo sapiens DNA sequence DG(B3):DC(D26) DC(B4):DG(D25) DT(B5):DA(D24) DG(B6):DC(D23) DA(B7):DT(D22) DT(B8):DA(D21) DG(B9):DC(D20) DC(B10):DG(D19) DG(B11):DC(D18) DT(B12):DA(D17) DA(B13):DT(D16) DG(C1):DC(D15) DT(C2):DA(D14) DC(C3):DG(D13) DG(C4):DC(D12) DG(C5):DC(D11) DA(C6):DT(D10) DC(C7):DG(D9) chainA ( 44) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 (285) HIS546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (329) ASN590 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (382) ARG643 0 0 0 0 0 0 1 5 6 0 0 0 0 0 0 0 0 0 (509) LYS770 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 (537) THR798 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 (611) PHE872 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 prot.sequence dpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsaRlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglalgvgdgvllkavaqatgrqlesvraeaaekgdvglvaensrstqrlmlppppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlrlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlaHptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrNqadntgkypdiisripkiklpsvtsfildteavawdrekkqiqpfqvlttrkRkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdyldgvgdtldlvvigaylgrgKragryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislrFprfirvredkqpeqattsaqvaclyrkqsqiqnq >7suv_B:DNase_I-like; title=APE1 EXONUCLEASE SUBSTRATE COMPLEX WITH 8OXOG OPPOSITE A organism=Homo sapiens DNA sequence DC(E13):DG(D9) DG(E14):DC(D8) DC(E15):DG(D7) DA(E16):DT(D6) DT(E17):DA(D5) DC(E18):DG(D4) DA(E19):DT(D3) DG(E20):DC(D2) DC(E21):DG(D1) chainB ( 56) LYS98 0 2 2 0 0 0 0 0 0 (135) ARG177 8 0 0 0 0 0 0 0 0 (227) TYR269 5 0 0 0 0 0 0 0 0 (228) MET270 21 0 0 0 0 0 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqqtKcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgnlnvaheeidlrnpkgnkknagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsDhcpitlylal >7svb_B:DNase_I-like; title=APE1 EXONUCLEASE SUBSTRATE COMPLEX WITH 8OXOG OPPOSITE C organism=Homo sapiens DNA sequence DG(D1):DC(E21) DC(D2):DG(E20) DT(D3):DA(E19) DG(D4):DC(E18) DA(D5):DT(E17) DT(D6):DA(E16) DG(D7):DC(E15) DC(D8):DG(E14) DG(D9):DC(E13) chainB ( 56) LYS98 0 0 0 0 0 0 4 2 0 (135) ARG177 0 0 0 0 0 0 0 0 2 (227) TYR269 0 0 0 0 0 0 0 0 5 (228) MET270 0 0 0 0 0 0 0 0 15 prot.sequence alyedppdqktspsgkpatlkicswnvDglrawikkkgldwvkeeapdilclqqtKcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgnlnvaheeidlrnpkgnkknagftpqerqgfgellqavpladsfrhlypntpyaytfwtYMmnarsknvgwrldyfllshsllpalcdskirskalgsDhcpitlylal >7svu_BCHIJKXY:P-loop_containing_nucleoside_triphosphate_hydrolases; title=TNSBCTD-TNSC-TNIQ COMPLEX organism=? DNA sequence DT(11):DA(228) DT(12):DA(227) DT(13):DA(226) DT(14):DA(225) DT(15):DA(224) DT(16):DA(223) DT(17):DA(222) DT(18):DA(221) DT(19):DA(220) DT(110):DA(219) DT(111):DA(218) DT(112):DA(217) DT(113):DA(216) DT(114):DA(215) DT(115):DA(214) DT(116):DA(213) DT(117):DA(212) DT(118):DA(211) DT(119):DA(210) DT(120):DA(29) DT(121):DA(28) DT(122):DA(27) DT(123):DA(26) DT(124):DA(25) DT(125):DA(24) DT(126):DA(23) DT(127):DA(22) DT(128):DA(21) chainB chainC chainH chainI chainJ chainK chainX ( 51) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 58) ASN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 chainY prot.sequence ewlqaeiarlkgksivplqqvktlhdwldgkrkarkscrvvgesrtgktvacdayryrhkpqqeagrpptvpvvyirphqkcgpkdlfkkiteylkyrvtkgtvsdfrdrtievlkgcgvemliideadrlkpetfadvrdiaedlgiavvlvgtdrldavikrdeqvlerfrahlrfgklsgedfkntvemweqmvlklpvssnlkskemlriltsategyigrldeilreaairslsrglkkidkavlqevakey/ewlqaeiarlkgksivplqqvktlhdwldgkrkarkscrvvgesrtgktvacdayryrhkpqqeagrpptvpvvyirphqkcgpkdlfkkiteylkyrvtkgtvsdfrdrtievlkgcgvemliideadrlkpetfadvrdiaedlgiavvlvgtdrldavikrdeqvlerfrahlrfgklsgedfkntvemweqmvlklpvssnlkskemlriltsategyigrldeilreaairslsrglkkidkavlqevakey/ewlqaeiarlkgksivplqqvktlhdwldgkrkarkscrvvgesrtgktvacdayryrhkpqqeagrpptvpvvyirphqkcgpkdlfkkiteylkyrvtkgtvsdfrdrtievlkgcgvemliideadrlkpetfadvrdiaedlgiavvlvgtdrldavikrdeqvlerfrahlrfgklsgedfkntvemweqmvlklpvssnlkskemlriltsategyigrldeilreaairslsrglkkidkavlqevakey/ewlqaeiarlkgksivplqqvktlhdwldgkrkarkscrvvgesrtgktvacdayryrhkpqqeagrpptvpvvyirphqkcgpkdlfkkiteylkyrvtkgtvsdfrdrtievlkgcgvemliideadrlkpetfadvrdiaedlgiavvlvgtdrldavikrdeqvlerfrahlrfgklsgedfkntvemweqmvlklpvssnlkskemlriltsategyigrldeilreaairslsrglkkidkavlqevakey/ewlqaeiarlkgksivplqqvktlhdwldgkrkarkscrvvgesrtgktvacdayryrhkpqqeagrpptvpvvyirphqkcgpkdlfkkiteylkyrvtkgtvsdfrdrtievlkgcgvemliideadrlkpetfadvrdiaedlgiavvlvgtdrldavikrdeqvlerfrahlrfgklsgedfkntvemweqmvlklpvssnlkskemlriltsategyigrldeilreaairslsrglkkidkavlqevakey/ewlqaeiarlkgksivplqqvktlhdwldgkrkarkscrvvgesrtgktvacdayryrhkpqqeagrpptvpvvyirphqkcgpkdlfkkiteylkyrvtkgtvsdfrdrtievlkgcgvemliideadrlkpetfadvrdiaedlgiavvlvgtdrldavikrdeqvlerfrahlrfgklsgedfkntvemweqmvlklpvssnlkskemlriltsategyigrldeilreaairslsrglkkidkavlqevakey/ieapdvkpwlflikpyegeslshflgrfrranhlsasglgtlagigaivaRwerfhfNprpsqqeleaiasvvevdaqrlaqmlppagvgmqhepirlcgacyaespchriewqyksvwkcdrhqlkilakcpncqapfkmpalwedgcchrcrmpfaemaklqk/ieapdvkpwlflikpyegeslshflgrfrranhlsasglgtlagigaivaRwerfhfNprpsqqeleaiasvvevdaqrlaqmlppagvgmqhepirlcgacyaespchriewqyksvwkcdrhqlkilakcpncqapfkmpalwedgcchrcrmpfaemaklqk >7svw_B:Ribonuclease_H-like;mu_transposase,_C-terminal_domain;Homeodomain-like; title=STRAND-TRANSFER COMPLEX OF TNSB FROM SHCAST organism=? DNA sequence DC(66):DG(419) DT(67):DA(418) DA(68):DT(417) DA(69):DT(416) DC(610):DG(415) DC(611):DG(414) DG(612):DC(413) DT(613):DA(412) DA(614):DT(411) DG(615):DC(410) DA(616):DT(49) DC(617):DG(48) DC(618):DG(47) DT(619):DA(46) DA(620):DT(45) DG(10):DC(44) DG(11):DC(43) DC(12):DC(42) DC(13):DG(41) DC(14):DG(40) chainB (262) LYS290 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 (315) VAL343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 (318) ARG346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 (323) GLU351 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 prot.sequence leknviatqlseeaqvkleviqsllepcdrttygqklreaaeklnvslrtvqrlvknweqdglvgltqtsradkgkhrigefwenfitktykegnkgskrmtpkqvalrveakarelkdskppnyktvlrvlapilekqqkaksirspgwrgttlsvktregkdlsvdysnhvwqcdhtrvdvllvdqhgeilsrpwlttvidtysrcimginlgfdapssgvvalalrhailpkrygseyklhcewgtygkpehfytdggKdfrsnhlsqigaqlgfvchlrdrpseggvverpfktlndqlfstlpgytgsnVqeRpedaEkdarltlreleqllvryivdrynqsidarmgdqtrferweaglptvpvpiperdldiclmkqsrrtvqrggclqfqnlmyrgeylagyagetvnlrfdprdittilvyrqennqevfltraha >7swy_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=2.6 A STRUCTURE OF A 40-601[TA-RICH+1]-40 NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DG(I-72):DC(J72) DG(I-71):DC(J71) DA(I-70):DT(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DG(I-62):DC(J62) DG(I-61):DC(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DC(I-57):DG(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DG(I-54):DC(J54) DG(I-53):DC(J53) DC(I-52):DG(J52) DC(I-51):DG(J51) DG(I-50):DC(J50) DC(I-49):DG(J49) DT(I-48):DA(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DT(I-44):DA(J44) DT(I-43):DA(J43) DG(I-42):DC(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DC(I-39):DG(J39) DG(I-38):DC(J38) DT(I-37):DA(J37) DA(I-36):DT(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DC(I-33):DG(J33) DA(I-32):DT(J32) DG(I-31):DC(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DT(I-27):DA(J27) DA(I-26):DT(J26) DG(I-25):DC(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DC(I70):DG(J-70) chainA ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 1) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hRyrpgtvareirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger/kVlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflEnvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/RrktRkesyaiyvykvlkqvhpdtgisckamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger/hrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnYaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlp/Rkesyaiyvykvlkqvhpdtgisckamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7swy_D:Histone-fold; title=2.6 A STRUCTURE OF A 40-601[TA-RICH+1]-40 NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DG(J-70):DC(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DC(J25):DG(I-25) DT(J26):DA(I-26) DA(J27):DT(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DC(J31):DG(I-31) DT(J32):DA(I-32) DG(J33):DC(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DT(J36):DA(I-36) DA(J37):DT(I-37) DC(J38):DG(I-38) DG(J39):DC(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DC(J42):DG(I-42) DA(J43):DT(I-43) DA(J44):DT(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DA(J48):DT(I-48) DG(J49):DC(I-49) DC(J50):DG(I-50) DG(J51):DC(I-51) DG(J52):DC(I-52) DC(J53):DG(I-53) DC(J54):DG(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DG(J57):DC(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DC(J61):DG(I-61) DC(J62):DG(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DT(J70):DA(I-70) DC(J71):DG(I-71) DC(J72):DG(I-72) chainD ( 1) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RrktRkesyaiyvykvlkqvhpdtgisckamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7sx5_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF LIGASE I WITH NICK DUPLEXES CONTAINING MISMATCH A:C organism=Homo sapiens DNA sequence DG(B3):DC(D26) DC(B4):DG(D25) DT(B5):DA(D24) DG(B6):DC(D23) DA(B7):DT(D22) DT(B8):DA(D21) DG(B9):DC(D20) DC(B10):DG(D19) DG(B11):DC(D18) DT(B12):DA(D17) DA(B13):DC(D16) DG(C1):DC(D15) DT(C2):DA(D14) DC(C3):DG(D13) DG(C4):DC(D12) DG(C5):DC(D11) DA(C6):DT(D10) DC(C7):DG(D9) chainA ( 45) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 (327) ASN590 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (372) PHE635 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (380) ARG643 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 (534) THR798 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 (608) PHE872 0 0 0 0 0 0 0 0 0 0 31 37 0 0 0 0 0 0 prot.sequence ldpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsaRlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglalgvgdgvllkavaqatgrqlesvraeaaekgdvglvaensrrlmlppppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlrlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlahptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrNqadntgkypdiisripkiklpsvtsfildteavawdrekkqiqpFqvlttrkRkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdylgvgdtldlvvigaylgrgkragryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislrFprfirvredkqpeqattsaqvaclyrkqs >7sxe_A:ATP-dependent_DNA_ligase_DNA-binding_domain;DNA_ligase/mRNA_capping_enzyme,_catalytic_domain;Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF LIGASE I WITH NICK DUPLEXES CONTAINING COGNATE G:T organism=Homo sapiens DNA sequence DG(B3):DC(D26) DC(B4):DG(D25) DT(B5):DA(D24) DG(B6):DC(D23) DA(B7):DT(D22) DT(B8):DA(D21) DG(B9):DC(D20) DC(B10):DG(D19) DG(B11):DC(D18) DT(B12):DA(D17) DG(B13):DT(D16) DG(C1):DC(D15) DT(C2):DA(D14) DC(C3):DG(D13) DG(C4):DC(D12) DG(C5):DC(D11) DA(C6):DT(D10) DC(C7):DG(D9) chainA ( 45) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 (370) PHE635 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (378) ARG643 0 0 0 0 0 0 1 4 7 0 0 0 0 0 0 0 0 0 (505) LYS770 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 (533) THR798 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 (607) PHE872 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 prot.sequence ldpsgynpaknnyhpvedacwkpgqkvpylavartfekieevsaRlrmvetlsnllrsvvalsppdllpvlylslnhlgppqqglalgvgdgvllkavaqatgrqlesvraeaaekgdvglvaensrmlppppltasgvfskfrdiarltgsastakkidiikglfvacrhsearfiarslsgrlrlglaeqsvlaalsqavsltppgqefppamvdagkgktaearktwleeqgmilkqtfcevpdldriipvllehglerlpehcklspgiplkpmlahptrgisevlkrfeeaaftceykydgqraqihaleggevkifsrnqadntgkypdiisripkiklpsvtsfildteavawdrekkqiqpFqvlttrkRkevdaseiqvqvclyafdliylngeslvreplsrrrqllrenfvetegefvfatsldtkdieqiaefleqsvkdsceglmvktldvdatyeiakrshnwlklkkdyldgvgdtldlvvigaylgrgKragryggfllasydedseelqaicklgTgfsdeeleehhqslkalvlpsprpyvridgavipdhwldpsavwevkcadlslspiypaarglvdsdkgislrFprfirvredkqpeqattsaqvaclyrkqsqi >7szj_CDF: title=CRYO-EM STRUCTURE OF RIFAMYCIN BOUND TO E. COLI RNAP AND RRNBP1 PROMOTER COMPLEX organism=? DNA sequence DC(Y1):DG(X69) DC(Y3):DC(X68) DG(Y4):DA(X67) DT(Y5):DC(X66) DA(Y6):DA(X65) DG(Y7):DG(X64) DG(Y9):DT(X63) DC(Y11):DG(X55) DC(Y12):DC(X54) DG(Y13):DG(X53) DT(Y14):DT(X52) DG(Y15):DA(X51) DT(Y16):DA(X50) DC(Y17):DT(X49) DA(Y18):DA(X48) DA(Y34):DT(X47) DG(Y35):DC(X46) DG(Y36):DC(X45) DG(Y37):DC(X44) DG(Y39):DC(X42) DT(Y40):DA(X41) DT(Y41):DA(X40) DA(Y42):DT(X39) DT(Y43):DA(X38) DT(Y44):DA(X37) DC(Y45):DG(X36) DC(Y46):DG(X35) DG(Y47):DC(X34) DC(Y49):DC(X33) DC(Y50):DG(X32) DT(Y51):DG(X31) DG(Y52):DC(X29) DA(Y53):DT(X28) DC(Y54):DG(X27) DA(Y55):DT(X26) DA(Y56):DT(X25) DG(Y57):DC(X24) DA(Y58):DT(X23) DG(Y59):DC(X22) DG(Y60):DC(X21) DA(Y62):DT(X20) DA(Y63):DT(X19) DT(Y64):DA(X17) chainC (369) ARG371 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 14 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (198) GLU211 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 8) VAL98 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG99 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) MET102 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) MET105 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LEU110 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) GLU116 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) ASN383 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG385 0 0 0 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) LEU386 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) SER428 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) THR429 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) THR432 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 1 0 0 0 0 0 0 0 (443) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/teefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsEtkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlariptgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/igrttdpVRmyMreMgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvddpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqfldliqegniglmkavdkFEyrRgYkfSTYaTWwirQaiTrsiadqartiripvHmiEtinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpishlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtrErirQieakalrklrhpsrsevlrsfld >7szj_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF RIFAMYCIN BOUND TO E. COLI RNAP AND RRNBP1 PROMOTER COMPLEX organism=? DNA sequence DA(X17):DT(Y64) DT(X19):DA(Y63) DT(X20):DA(Y62) DC(X21):DG(Y60) DC(X22):DG(Y59) DT(X23):DA(Y58) DC(X24):DG(Y57) DT(X25):DA(Y56) DT(X26):DA(Y55) DG(X27):DC(Y54) DT(X28):DA(Y53) DC(X29):DG(Y52) DG(X31):DT(Y51) DG(X32):DC(Y50) DC(X33):DC(Y49) DC(X34):DG(Y47) DG(X35):DC(Y46) DG(X36):DC(Y45) DA(X37):DT(Y44) DA(X38):DT(Y43) DT(X39):DA(Y42) DA(X40):DT(Y41) DA(X41):DT(Y40) DC(X42):DG(Y39) DC(X44):DG(Y37) DC(X45):DG(Y36) DC(X46):DG(Y35) DT(X47):DA(Y34) DA(X48):DA(Y18) DT(X49):DC(Y17) DA(X50):DT(Y16) DA(X51):DG(Y15) DT(X52):DT(Y14) DG(X53):DG(Y13) DC(X54):DC(Y12) DG(X55):DC(Y11) DT(X63):DG(Y9) DG(X64):DG(Y7) DA(X65):DA(Y6) DC(X66):DT(Y5) DA(X67):DG(Y4) DC(X68):DC(Y3) DG(X69):DC(Y1) chainF ( 8) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 9) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 ( 12) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 ( 15) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 20) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 ( 26) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (242) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (244) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 (245) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (278) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 (288) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 (289) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 (292) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) GLU585 0 0 0 0 0 0 0 1 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) GLN589 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence igrttdpVRmyMreMgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvddpelarekfaelraqyvvtrdtikataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqfldliqegniglmkavdkFEyrRgYkfSTYaTWwirQaiTrsiadqartiripvHmiEtinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpishlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtrErirQieakalrklrhpsrsevlrsfld >7t02_A:S-adenosyl-L-methionine-dependent_methyltransferases;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF DNMT5 PSEUDO-TERNARY COMPLEX SOLVED BY INCUBATION WITH HEMIMETHYLATED DNA AND SAM organism=CRYPTOCOCCUS NEOFORMANS VAR. GRUBII H99 DNA sequence DC(D1):DG(B36) DC(D2):DG(B35) DA(D3):DT(B34) DT(D4):DA(B33) DG(D5):DC(B32) DC(D6):DG(B31) DG(D7):DG(B29) DC(D8):DA(B28) DT(D9):DC(B27) DG(D10):DT(B26) DA(D11):DG(B25) chainA (332) GLN668 0 0 0 0 0 14 4 0 0 0 0 (333) ASN669 0 0 0 0 0 5 0 0 0 0 0 (336) ARG672 0 0 0 0 27 22 0 0 0 0 0 (338) THR674 0 0 0 2 0 0 0 0 0 0 0 (348) CYS684 0 0 0 0 0 3 0 0 0 0 0 (350) THR686 0 0 0 0 0 7 0 0 0 0 0 (352) ASN688 0 0 0 0 0 0 6 0 0 0 0 prot.sequence sddlppisdieamfdhlvsripdivelvrqlngrklrvatmcsgtespllalnmiakaikaqhgltlafehvfsceiepfkqayiernftppilfrdvtelgkkrahtaygsmvdvpgdvdiliagtscvdgrtfrgmlqwvkkhqppivilenvcnapwdkvveyfgqidydaqytrldtkefyiphtrtrvylfatpsdlpekwaqtvkdlrrpwsspfeafllhtddpnihrarlelasaraqtsrkttdwnrcesrhqrarqdealgllrpltswqeagvckgldwtwndwllaqtervvdlleistlrmakdgidsgfkaciwnvsQNvdRqTgssktalapClTpNmipwvtirggpvtgrealalqgipvrellltsenedqladlagnamtttvvgsamiaalkvachkiteganpekeaalilekeavddeqvanriigedylehhdldlakvtksnlseildlacrssrhcqcegqsgtapnilecqecsyrackscggrpehvyapcanqrvepaefekrfkgllpmrvriagltdqclnavrkaaeksnkgsvndndwqlwstallegihdaefrfrylkrqstwtavyearramlslvlrnqipewrltikapasepnnsqlralllhpvarlqidiagqdvlcgpwelcipsmktidieitgkgellpswqaslglqgpfanttrwseveislqaedentldrklsgtyqllprcgqamsslhkkrpddglpqlyffldptrcgesredryvfststerldygterpviarldshwregnekqrkvkldvsgawvkcpeahltairatfaipssasaisaslttegcshamallscrvpldpthsesmwrawaeidlshqgnttfanlawiterlppldglknwahiaddvsehvcercaprppkihwiktiiafedkleagqyehalkhrpspfvvqlrldqdigsfriglnivslahralsrlpkislswrltpghvqprrvfilpsnkqdpkeqlrslwwmleqekatgkthtfveeeisesllpavgwraegkaerpvmvrggviadtvisialvaqtlsdlkatlivvpghlskqwpneiarftgsmfkviviqgmkdlqektiaelgkadiivmaseifesdvywsrleylsaqplhdrffcdrldaameslvsqtkilvlhmfrfrrviadeftylqkkslaavlrlsssyrwilsgtppvsdfaairsiatfmgihlgveddgegdvqyqkarakdqtqaekfhafrevhsrawhnrrdelaqeflnvfvrqniaeiptvehihtfklpasegavylelehhlqalemqarketkfknvsqgdrnarleealsdsktaeeallkrcchftldlsdktqdaksaqeacdhitsararqllacqedlsrsvnqaialhgwikkkgdderqpfaewiafssniskhqgdieaarillkviekcgvkdgnippspsdkqspakmddvkwqlreqthllrklvkelvarvrslrffevvrkiqkgksdaqivlessecghkpstnpdiemailsccghvachkcmrkaaasqrcvksgecqaavrptnivkvsslgvegelssgrygaklehlvnlihsipknervlvflqwedlagkvsealsagriphvtlaksrantldrfqsarvlllkmnsnlttanhavflgplftnslfnyravetqaigrvrrygqqkkvhihrllaldtidmtifnarrtelkektdweeipqeey >7t18_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REV1 TERNARY COMPLEX WITH DTTP AND CA2+ organism=Saccharomyces cerevisiae DNA sequence DG(P1):DC(T17) DG(P2):DC(T16) DG(P3):DC(T15) DG(P4):DC(T14) DT(P5):DA(T13) DG(P6):DC(T12) DT(P7):DA(T11) DG(P8):DC(T10) DG(P9):DC(T9) DT(P10):DA(T8) DA(P11):DT(T7) DG(P12):DC(T6) chainA ( 20) LEU325 0 0 0 0 0 0 0 0 0 0 0 14 ( 23) LEU328 0 0 0 0 0 0 0 0 0 0 0 5 ( 24) SER329 0 0 0 0 0 0 0 0 0 0 3 6 (321) ASP626 0 0 0 0 0 0 0 0 0 0 8 0 (387) SER692 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence rivacddpdfltsyfahsrLhhLSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdvgpdnnq >7t19_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REV1 TERNARY COMPLEX WITH DGTP AND CA2+ organism=Saccharomyces cerevisiae DNA sequence DC(T6):DG(P12) DT(T7):DA(P11) DA(T8):DT(P10) DC(T9):DG(P9) DC(T10):DG(P8) DA(T11):DT(P7) DC(T12):DG(P6) DA(T13):DT(P5) DC(T14):DG(P4) DC(T15):DG(P3) DC(T16):DG(P2) DC(T17):DG(P1) chainA ( 19) LEU325 13 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU328 2 0 0 0 0 0 0 0 0 0 0 0 ( 23) SER329 4 1 0 0 0 0 0 0 0 0 0 0 (320) ASP626 0 10 0 0 0 0 0 0 0 0 0 0 (386) SER692 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence ivacddpdfltsyfahsrLhhLSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdvgpdnnq >7t1a_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REV1 TERNARY COMPLEX WITH DATP AND CA2+ organism=Saccharomyces cerevisiae DNA sequence DC(T6):DG(P12) DT(T7):DA(P11) DA(T8):DT(P10) DC(T9):DG(P9) DC(T10):DG(P8) DA(T11):DT(P7) DC(T12):DG(P6) DA(T13):DT(P5) DC(T14):DG(P4) DC(T15):DG(P3) DC(T16):DG(P2) DC(T17):DG(P1) chainA ( 19) LEU325 16 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU328 4 0 0 0 0 0 0 0 0 0 0 0 ( 23) SER329 5 1 0 0 0 0 0 0 0 0 0 0 (320) ASP626 0 10 0 0 0 0 0 0 0 0 0 0 (386) SER692 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence ivacddpdfltsyfahsrLhhLSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdvgpdnnq >7t1b_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=REV1 TERNARY COMPLEX WITH RCTP AND CA2+ organism=Saccharomyces cerevisiae DNA sequence DC(T6):DG(P12) DT(T7):DA(P11) DA(T8):DT(P10) DC(T9):DG(P9) DC(T10):DG(P8) DA(T11):DT(P7) DC(T12):DG(P6) DA(T13):DT(P5) DC(T14):DG(P4) DC(T15):DG(P3) DC(T16):DG(P2) DC(T17):DG(P1) chainA ( 19) LEU325 9 0 0 0 0 0 0 0 0 0 0 0 ( 23) SER329 4 0 0 0 0 0 0 0 0 0 0 0 (320) ASP626 0 11 0 0 0 0 0 0 0 0 0 0 (386) SER692 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence ivacddpdfltsyfahsrLhhlSawkanlkdkflnenihkytkitdkdtyiifhidfdcffatvaylcrsssfsacdfkrdpivvchgtknsdiascnyvarsygikngmwvsqaekmlpngiklislpytfeqfqlkseafystlkrlnifnlilpisideavcvriipdnihntntlnarlceeirqeifqgtngctvsigcsdslvlarlalkmakpngynitfksnlseefwssfklddlpgvghstlsrlestfdsphslndlrkrytldalkasvgsklgmkihlalqgqddeeslkilydpkevlqrkslsiDinwgirfknitqvdlfiergcqylleklneinkttsqitlklmrrckdapieppkymgmgrcdsfSrssrlgiptnefgiiatemkslyrtlgcppmelrglalqfnklvdvgpdnnq >7t20_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases;N-terminal_domain_of_DnaB_helicase; title=E. COLI DNAB BOUND TO SSDNA AND AMPPNP organism=? DNA sequence DT(M3) DT(M4) DT(M5) DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) chainA chainB (334) THR358 0 0 0 0 0 0 0 1 0 0 chainC (334) THR358 0 0 0 0 0 1 0 0 0 0 (367) GLN391 0 0 0 0 0 0 0 0 1 0 chainD (334) THR358 0 0 0 1 0 0 0 0 0 0 chainE (332) ASN356 5 0 0 0 0 0 0 0 0 0 (334) THR358 3 1 0 0 0 0 0 0 0 0 chainF prot.sequence kvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrtleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnya/kvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrTleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/kvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrTleiaeisrslkalakelnvpvvalsqlnrsleQradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnya/kvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrTleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/kvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdNrTleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnya/kvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdNrTleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde >7t20_E:P-loop_containing_nucleoside_triphosphate_hydrolases;N-terminal_domain_of_DnaB_helicase; title=E. COLI DNAB BOUND TO SSDNA AND AMPPNP organism=? DNA sequence DT(M3) DT(M4) DT(M5) DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) chainE (332) ASN356 5 0 0 0 0 0 0 0 0 0 (334) THR358 3 1 0 0 0 0 0 0 0 0 prot.sequence kvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdNrTleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnya >7t21_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases;N-terminal_domain_of_DnaB_helicase; title=E. COLI DNAB BOUND TO SSDNA AND ADP-ALF4 organism=? DNA sequence DT(M1) DT(M2) DT(M3) DT(M4) DT(M5) DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) chainA chainB (335) THR358 0 0 0 0 0 0 0 0 1 0 0 0 0 (368) GLN391 0 0 0 0 0 0 0 0 0 0 0 0 1 chainC chainD (335) THR358 0 0 0 0 1 0 0 0 0 0 0 0 0 chainE (335) THR358 0 0 1 0 0 0 0 0 0 0 0 0 0 chainF (333) ASN356 13 0 0 0 0 0 0 0 0 0 0 0 0 (335) THR358 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrtleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrTleiaeisrslkalakelnvpvvalsqlnrsleQradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrTleiaeisrslkalakelnvpvvalsqlnrsleQradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrTleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrTleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdNrTleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde >7t22_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases;N-terminal_domain_of_DnaB_helicase; title=E. COLI DNAB BOUND TO THREE DNAG C-TERMINAL DOMAINS, SSDNA, ADP AND ALF4 organism=? DNA sequence DT(M1) DT(M2) DT(M3) DT(M4) DT(M5) DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) chainA chainB (368) GLN391 0 0 0 0 0 0 0 0 0 0 0 0 1 chainC chainD chainE (333) ASN356 0 1 0 0 0 0 0 0 0 0 0 0 0 (335) THR358 0 0 2 0 0 0 0 0 0 0 0 0 0 chainF (333) ASN356 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggcaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrtleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggcaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrtleiaeisrslkalakelnvpvvalsqlnrsleQradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggcaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrtleiaeisrslkalakelnvpvvalsqlnrsleQradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggcaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrtleiaeisrslkalakelnvpvvalsqlnrsleQradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggcaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdNrTleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggcaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdNrtleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde >7t22_F:P-loop_containing_nucleoside_triphosphate_hydrolases;N-terminal_domain_of_DnaB_helicase; title=E. COLI DNAB BOUND TO THREE DNAG C-TERMINAL DOMAINS, SSDNA, ADP AND ALF4 organism=? DNA sequence DT(M1) DT(M2) DT(M3) DT(M4) DT(M5) DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) chainF (333) ASN356 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggcaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdNrtleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde >7t23_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases;N-terminal_domain_of_DnaB_helicase; title=E. COLI DNAB BOUND TO TWO DNAG C-TERMINAL DOMAINS, SSDNA, ADP AND ALF4 organism=? DNA sequence DT(M1) DT(M2) DT(M3) DT(M4) DT(M5) DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) chainA chainB (368) GLN391 0 0 0 0 0 0 0 0 0 0 0 0 1 chainC (335) THR358 0 0 0 0 0 0 1 0 0 0 0 0 0 chainD chainE (333) ASN356 0 1 4 0 0 0 0 0 0 0 0 0 0 (335) THR358 0 0 2 1 0 0 0 0 0 0 0 0 0 chainF (333) ASN356 8 0 0 0 0 0 0 0 0 0 0 0 0 (335) THR358 1 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggcaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrtleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggcaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrtleiaeisrslkalakelnvpvvalsqlnrsleQradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggcaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrTleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggcaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrTleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggcaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdNrTleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde/lkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggcaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdNrTleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde >7t3l_JK: title=CRYO-EM STRUCTURE OF CSY-ACRIF24-DNA DIMER organism=? DNA sequence DC(P1):DG(O20) DC(P2):DG(O19) DC(P3):DG(O18) DC(P4):DG(O17) DC(P5):DG(O16) DC(P6):DG(O15) DC(P7):DG(O14) DC(P8):DG(O13) DC(P9):DG(O12) DC(P10):DG(O11) DC(P11):DG(O10) DC(P12):DG(O9) DC(P13):DG(O8) DC(P14):DG(O7) DC(P15):DG(O6) DC(P16):DG(O5) DC(P17):DG(O4) DC(P18):DG(O3) DC(P19):DG(O2) DC(P20):DG(O1) DC(P21):DG(O0) chainJ (197) LYS197 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (205) ALA205 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ASN206 0 0 0 0 0 0 4 11 6 0 0 0 0 0 0 0 0 0 0 0 0 chainK prot.sequence mnaihigpfsitpaarglhygglphhqwtlyygpremaiktlpdsytssevrdefsdiiaefvidarhryapdvlelvnsdgdavlarvavsrlpealsgcipddrfpywlltasrprlglpvtlneytalavelsapplawitgllpgevlthdaeewrpptswelrhvvgegsftgvsgaaaaallgmsatnfrKytagdsaANrqkisfaawhylldrlgvkras/mnaihigpfsitpaarglhygglphhqwtlyygpremaiktlpdsytssevrdefsdiiaefvidarhryapdvlelvnsdgdavlarvavsrlpealsgcipddrfpywlltasrprlglpvtlneytalavelsapplawitgllpgevlthdaeewrpptswelrhvvgegsftgvsgaaaaallgmsatnfrKytagdsaANrqkisfaawhylldrlgvkras >7t8k_AB: title=BRXR FROM ACINETOBACTER BREX TYPE I PHAGE RESTRICTION SYSTEM BOUND TO DNA organism=ACINETOBACTER SP. NEB 394 DNA sequence DA(C1):DT(D25) DT(C2):DA(D24) DA(C3):DT(D23) DC(C4):DG(D22) DA(C5):DT(D21) DG(C6):DC(D20) DT(C7):DA(D19) DA(C8):DT(D18) DA(C9):DT(D17) DA(C10):DT(D16) DT(C11):DA(D15) DT(C12):DA(D14) DA(C13):DT(D13) DT(C14):DA(D12) DT(C15):DA(D11) DT(C16):DA(D10) DT(C17):DA(D9) DT(C18):DA(D8) DA(C19):DT(D7) DC(C20):DG(D6) DG(C21):DC(D5) DG(C22):DC(D4) DT(C23):DA(D3) DA(C24):DT(D2) DT(C25):DA(D1) chainA ( 35) SER37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 ( 36) ARG38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 13 0 0 0 0 ( 37) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 11 0 0 0 0 0 0 ( 38) GLN40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 62) LYS64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 chainB ( 35) SER37 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG38 0 0 0 0 11 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN39 0 0 0 0 0 0 11 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN40 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) HIS59 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) LYS64 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence adkhevllrmraiellaywegrlvttrlmnwfglSRQQaSadikryntlynpdalihdpsvKgyvpkasfqpvlttahineylnmlsglvseshaliampepnlaavqlpdrsvrpevirevlracrnqstlkmiyasmqnpqwheriisphtlvytgfrwhvraychqskqfkdfllsridrtpvvvaiesvdpaqdqqwheeivltlipnpklnssqqalvekdfgmpdgrlqipvkkalahytlqryqtaitlaeaedalkyplvlqrsdieklssylfdqas/adkhevllrmraiellaywegrlvttrlmnwfglSRQQaSadikryntlynpdaliHdpsvKgyvpkasfqpvlttahineylnmlsglvseshaliampepnlaavqlpdrsvrpevirevlracrnqstlkmiyasmqnpqwheriisphtlvytgfrwhvraychqskqfkdfllsridrtpvvvaiesvdpaqdqqwheeivltlipnpklnssqqalvekdfgmpdgrlqipvkkalahytlqryqtaitlaeaedalkyplvlqrsdiekl >7t8k_B: title=BRXR FROM ACINETOBACTER BREX TYPE I PHAGE RESTRICTION SYSTEM BOUND TO DNA organism=ACINETOBACTER SP. NEB 394 DNA sequence DA(C1):DT(D25) DT(C2):DA(D24) DA(C3):DT(D23) DC(C4):DG(D22) DA(C5):DT(D21) DG(C6):DC(D20) DT(C7):DA(D19) DA(C8):DT(D18) DA(C9):DT(D17) DA(C10):DT(D16) DT(C11):DA(D15) DT(C12):DA(D14) DA(C13):DT(D13) DT(C14):DA(D12) DT(C15):DA(D11) DT(C16):DA(D10) DT(C17):DA(D9) DT(C18):DA(D8) DA(C19):DT(D7) DC(C20):DG(D6) DG(C21):DC(D5) DG(C22):DC(D4) DT(C23):DA(D3) DA(C24):DT(D2) DT(C25):DA(D1) chainB ( 35) SER37 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG38 0 0 0 0 11 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN39 0 0 0 0 0 0 11 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLN40 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) SER42 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) HIS59 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) LYS64 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence adkhevllrmraiellaywegrlvttrlmnwfglSRQQaSadikryntlynpdaliHdpsvKgyvpkasfqpvlttahineylnmlsglvseshaliampepnlaavqlpdrsvrpevirevlracrnqstlkmiyasmqnpqwheriisphtlvytgfrwhvraychqskqfkdfllsridrtpvvvaiesvdpaqdqqwheeivltlipnpklnssqqalvekdfgmpdgrlqipvkkalahytlqryqtaitlaeaedalkyplvlqrsdiekl >7tan_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF VRK1 C-TERMINAL TAIL BOUND TO NUCLEOSOME CORE PARTICLE organism=HOMO SAPIENS DNA sequence DG(J-76):DC(I76) DC(J-75):DG(I75) DC(J-74):DG(I74) DC(J-73):DG(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlrDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfg/aRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/sRkesysvyvykvlkqvhpdtgisskamgimnSfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/kVLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/sRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >7taw_JK: title=CRYO-EM STRUCTURE OF THE CSY-ACRIF24-PROMOTER DNA DIMER organism=? DNA sequence DT(X1):DA(Y19) DT(X2):DA(Y18) DA(X3):DT(Y17) DG(X4):DC(Y16) DC(X5):DG(Y15) DT(X6):DA(Y14) DC(X7):DG(Y13) DG(X8):DC(Y12) DA(X9):DT(Y11) DA(X10):DT(Y10) DT(X11):DA(Y9) DC(X12):DG(Y8) DG(X13):DC(Y7) DA(X14):DT(Y6) DG(X15):DC(Y5) DC(X16):DG(Y4) DT(X17):DA(Y3) DA(X18):DT(Y2) DT(X19):DA(Y1) chainJ (191) SER191 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 (193) THR193 0 0 0 2 7 9 2 0 0 0 0 0 0 0 0 0 0 0 0 (194) ASN194 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (196) ARG196 0 2 13 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) LYS197 0 0 0 0 2 4 4 0 0 0 0 0 0 0 0 0 0 0 0 (206) ASN206 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN208 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 chainK (191) SER191 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (193) THR193 0 0 0 0 0 0 0 0 0 0 0 0 2 12 4 1 0 0 0 (194) ASN194 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (196) ARG196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 1 0 (197) LYS197 0 0 0 0 0 0 0 0 0 0 0 3 2 5 1 0 0 0 0 (206) ASN206 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (208) GLN208 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 prot.sequence mnaihigpfsitpaarglhygglphhqwtlyygpremaiktlpdsytssevrdefsdiiaefvidarhryapdvlelvnsdgdavlarvavsrlpealsgcipddrfpywlltasrprlglpvtlneytalavelsapplawitgllpgevlthdaeewrpptswelrhvvgegsftgvsgaaaaallgmSaTNfRKytagdsaaNrQkisfaawhylldrlgvkras/mnaihigpfsitpaarglhygglphhqwtlyygpremaiktlpdsytssevrdefsdiiaefvidarhryapdvlelvnsdgdavlarvavsrlpealsgcipddrfpywlltasrprlglpvtlneytalavelsapplawitgllpgevlthdaeewrpptswelrhvvgegsftgvsgaaaaallgmSaTNfRKytagdsaaNrQkisfaawhylldrlgvkras >7taw_K: title=CRYO-EM STRUCTURE OF THE CSY-ACRIF24-PROMOTER DNA DIMER organism=? DNA sequence DA(Y1):DT(X19) DT(Y2):DA(X18) DA(Y3):DT(X17) DG(Y4):DC(X16) DC(Y5):DG(X15) DT(Y6):DA(X14) DC(Y7):DG(X13) DG(Y8):DC(X12) DA(Y9):DT(X11) DT(Y10):DA(X10) DT(Y11):DA(X9) DC(Y12):DG(X8) DG(Y13):DC(X7) DA(Y14):DT(X6) DG(Y15):DC(X5) DC(Y16):DG(X4) DT(Y17):DA(X3) DA(Y18):DT(X2) DA(Y19):DT(X1) chainK (191) SER191 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (193) THR193 0 0 0 1 4 12 2 0 0 0 0 0 0 0 0 0 0 0 0 (194) ASN194 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (196) ARG196 0 1 11 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) LYS197 0 0 0 0 1 5 2 3 0 0 0 0 0 0 0 0 0 0 0 (206) ASN206 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN208 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 prot.sequence mnaihigpfsitpaarglhygglphhqwtlyygpremaiktlpdsytssevrdefsdiiaefvidarhryapdvlelvnsdgdavlarvavsrlpealsgcipddrfpywlltasrprlglpvtlneytalavelsapplawitgllpgevlthdaeewrpptswelrhvvgegsftgvsgaaaaallgmSaTNfRKytagdsaaNrQkisfaawhylldrlgvkras >7tax_J: title=CRYO-EM STRUCTURE OF THE CSY-ACRIF24-PROMOTER DNA COMPLEX organism=? DNA sequence DA(Y1):DT(X19) DT(Y2):DA(X18) DA(Y3):DT(X17) DG(Y4):DC(X16) DC(Y5):DG(X15) DT(Y6):DA(X14) DC(Y7):DG(X13) DG(Y8):DC(X12) DA(Y9):DT(X11) DT(Y10):DA(X10) DT(Y11):DA(X9) DC(Y12):DG(X8) DG(Y13):DC(X7) DA(Y14):DT(X6) DG(Y15):DC(X5) DC(Y16):DG(X4) DT(Y17):DA(X3) DA(Y18):DT(X2) DA(Y19):DT(X1) chainJ (191) SER191 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (193) THR193 0 0 0 0 0 0 0 0 0 0 0 0 2 9 6 2 0 0 0 (194) ASN194 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (196) ARG196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 2 0 (197) LYS197 0 0 0 0 0 0 0 0 0 0 0 0 4 4 2 0 0 0 0 (206) ASN206 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (208) GLN208 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 prot.sequence mnaihigpfsitpaarglhygglphhqwtlyygpremaiktlpdsytssevrdefsdiiaefvidarhryapdvlelvnsdgdavlarvavsrlpealsgcipddrfpywlltasrprlglpvtlneytalavelsapplawitgllpgevlthdaeewrpptswelrhvvgegsftgvsgaaaaallgmSaTNfRKytagdsaaNrQkisfaawhylldrlgvkras >7tax_JK: title=CRYO-EM STRUCTURE OF THE CSY-ACRIF24-PROMOTER DNA COMPLEX organism=? DNA sequence DA(Y1):DT(X19) DT(Y2):DA(X18) DA(Y3):DT(X17) DG(Y4):DC(X16) DC(Y5):DG(X15) DT(Y6):DA(X14) DC(Y7):DG(X13) DG(Y8):DC(X12) DA(Y9):DT(X11) DT(Y10):DA(X10) DT(Y11):DA(X9) DC(Y12):DG(X8) DG(Y13):DC(X7) DA(Y14):DT(X6) DG(Y15):DC(X5) DC(Y16):DG(X4) DT(Y17):DA(X3) DA(Y18):DT(X2) DA(Y19):DT(X1) chainJ (191) SER191 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (193) THR193 0 0 0 0 0 0 0 0 0 0 0 0 2 9 6 2 0 0 0 (194) ASN194 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (196) ARG196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 2 0 (197) LYS197 0 0 0 0 0 0 0 0 0 0 0 0 4 4 2 0 0 0 0 (206) ASN206 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (208) GLN208 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 chainK (191) SER191 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (193) THR193 0 0 0 1 4 12 2 0 0 0 0 0 0 0 0 0 0 0 0 (194) ASN194 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (196) ARG196 0 1 11 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) LYS197 0 0 0 0 1 5 2 3 0 0 0 0 0 0 0 0 0 0 0 (206) ASN206 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) GLN208 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 prot.sequence mnaihigpfsitpaarglhygglphhqwtlyygpremaiktlpdsytssevrdefsdiiaefvidarhryapdvlelvnsdgdavlarvavsrlpealsgcipddrfpywlltasrprlglpvtlneytalavelsapplawitgllpgevlthdaeewrpptswelrhvvgegsftgvsgaaaaallgmSaTNfRKytagdsaaNrQkisfaawhylldrlgvkras/mnaihigpfsitpaarglhygglphhqwtlyygpremaiktlpdsytssevrdefsdiiaefvidarhryapdvlelvnsdgdavlarvavsrlpealsgcipddrfpywlltasrprlglpvtlneytalavelsapplawitgllpgevlthdaeewrpptswelrhvvgegsftgvsgaaaaallgmSaTNfRKytagdsaaNrQkisfaawhylldrlgvkras >7tdw_A:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF FOXP3-DNA COMPLEX organism=? DNA sequence DA(B1):DT(C14) DA(B2):DT(C13) DA(B3):DT(C12) DT(B4):DA(C11) DT(B5):DA(C10) DT(B6):DA(C9) DG(B7):DC(C8) DT(B8):DA(C7) DT(B9):DA(C6) DT(B10):DA(C5) DA(B11):DT(C4) DC(B12):DG(C3) DT(B13):DA(C2) DC(B14):DG(C1) chainA ( 62) ASN383 0 0 0 0 0 0 0 0 4 1 0 0 0 0 ( 65) ARG386 0 0 0 0 0 10 3 1 0 0 0 0 0 0 ( 66) HIS387 0 0 0 0 0 0 0 0 5 2 5 0 0 0 ( 69) SER390 0 0 0 0 0 0 0 5 2 0 0 0 0 0 prot.sequence peffhnmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSlhkcfvrvesekgavwtvdef >7tdx_A:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF FOXP3-DNA COMPLEX organism=? DNA sequence DA(B1):DT(C14) DA(B2):DT(C13) DA(B3):DT(C12) DT(B4):DA(C11) DT(B5):DA(C10) DT(B6):DA(C9) DG(B7):DC(C8) DT(B8):DA(C7) DT(B9):DA(C6) DT(B10):DA(C5) DA(B11):DT(C4) DC(B12):DG(C3) DT(B13):DA(C2) DC(B14):DG(C1) chainA ( 62) ASN383 0 0 0 0 0 0 0 0 7 3 0 0 0 0 ( 65) ARG386 0 0 0 0 0 10 3 1 0 0 0 0 0 0 ( 66) HIS387 0 0 0 0 0 0 0 0 8 10 13 0 0 0 ( 69) SER390 0 0 0 0 0 0 0 7 1 0 0 0 0 0 ( 70) LEU391 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence peffhnmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdef >7tea_AC:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF S. AUREUS GLNR-DNA COMPLEX organism=Staphylococcus aureus DNA sequence DC(D0):DG(H20) DG(D1):DC(H19) DT(D2):DA(H18) DG(D3):DC(H17) DT(D4):DA(H16) DC(D5):DG(H15) DA(D6):DT(H14) DG(D7):DC(H13) DA(D8):DT(H12) DT(D9):DA(H11) DA(D10):DT(H10) DA(D11):DT(H9) DT(D12):DA(H8) DC(D13):DG(H7) DT(D14):DA(H6) DG(D15):DC(H5) DA(D16):DT(H4) DC(D17):DG(H3) DA(D18):DT(H2) DC(D19):DG(H1) DG(D20):DC(H0) chainA ( 23) ARG28 0 0 13 16 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG31 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) TYR32 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS48 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 chainC ( 23) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 16 16 0 0 ( 26) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 ( 27) TYR32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 ( 43) LYS48 0 0 0 0 0 0 0 0 0 0 1 2 3 0 0 0 0 0 0 0 0 prot.sequence airrnmavfsmsvvskltdltpRqiRYyethelikpertegqKrlfslndlerlleiksllekgfnikeikqiyds/airrnmavfsmsvvskltdltpRqiRYyethelikpertegqKrlfslndlerlleiksllekgfnikeikqiiyd >7tea_B:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF S. AUREUS GLNR-DNA COMPLEX organism=Staphylococcus aureus DNA sequence DC(F0):DG(G20) DG(F1):DC(G19) DT(F2):DA(G18) DG(F3):DC(G17) DT(F4):DA(G16) DC(F5):DG(G15) DA(F6):DT(G14) DG(F7):DC(G13) DA(F8):DT(G12) DT(F9):DA(G11) DT(F10):DA(G10) DA(F11):DT(G9) DT(F12):DA(G8) DC(F13):DG(G7) DT(F14):DA(G6) DG(F15):DC(G5) DA(F16):DT(G4) DC(F17):DG(G3) DA(F18):DT(G2) DC(F19):DG(G1) DG(F20):DC(G0) chainB ( 23) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 16 13 0 0 ( 26) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 ( 27) TYR32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 ( 43) LYS48 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 prot.sequence airrnmavfsmsvvskltdltpRqiRYyethelikpertegqKrlfslndlerlleiksllekgfnikeikqiiydsq >7tea_BE:Putative_DNA-binding_domain; title=CRYSTAL STRUCTURE OF S. AUREUS GLNR-DNA COMPLEX organism=Staphylococcus aureus DNA sequence DC(F0):DG(G20) DG(F1):DC(G19) DT(F2):DA(G18) DG(F3):DC(G17) DT(F4):DA(G16) DC(F5):DG(G15) DA(F6):DT(G14) DG(F7):DC(G13) DA(F8):DT(G12) DT(F9):DA(G11) DT(F10):DA(G10) DA(F11):DT(G9) DT(F12):DA(G8) DC(F13):DG(G7) DT(F14):DA(G6) DG(F15):DC(G5) DA(F16):DT(G4) DC(F17):DG(G3) DA(F18):DT(G2) DC(F19):DG(G1) DG(F20):DC(G0) chainB ( 23) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 16 13 0 0 ( 26) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 ( 27) TYR32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 ( 43) LYS48 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 chainE ( 23) ARG28 0 0 13 16 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ARG31 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) TYR32 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS48 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence airrnmavfsmsvvskltdltpRqiRYyethelikpertegqKrlfslndlerlleiksllekgfnikeikqiiydsq/airrnmavfsmsvvskltdltpRqiRYyethelikpertegqKrlfslndlerlleiksllekgfnikeikqiiydsq >7tec_A:Putative_DNA-binding_domain; title=STRUCTURE OF THE LISTERIA MONOCYTOGENES GLNR-DNA COMPLEX TO 3.45 ANGSTROM organism=Listeria monocytogenes DNA sequence DC(H19) DA(H18) DC(H17) DA(H16) DG(H15) DT(H14) DC(H13) DT(H12) DA(H11) DA(H10) DT(H9) DA(H8) DG(H7) DA(H6) DC(H5) DT(H4) DG(H3) DT(H2) DG(H1) DC(H0):DG(H1) chainA ( 25) ARG26 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG29 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ekeirrsmplfpigpvmkltdltaRqiRyyedqglihparnqgnhrlyslqdidvlleikdylndglniagi >7tfh_BCE: title=ATOMIC MODEL OF THE S. CEREVISIAE CLAMP-CLAMP LOADER COMPLEX PCNA-RFC BOUND TO TWO DNA MOLECULES, ONE AT THE 5'-RECESSED END AND THE OTHER AT THE 3'-RECESSED END organism=? DNA sequence DG(J1):DC(I30) DC(J2):DG(I29) DA(J3):DT(I28) DG(J4):DC(I27) DA(J5):DT(I26) DC(J6):DG(I25) DA(J7):DT(I24) DC(J8):DG(I23) DT(J9):DA(I22) DA(J10):DT(I21) DC(J11):DG(I20) DG(J12):DC(I19) DA(J13):DT(I18) DG(J14):DC(I17) DT(J15):DA(I16) DA(J16):DT(I15) DC(J17):DG(I14) DA(J18):DT(I13) DT(J19):DA(I12) DA(J20):DT(I11) chainB (269) ARG272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (272) LYS275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 chainC chainE ( 81) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnqsnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfRvtKnlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnnka/ekrskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahkltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglaLidLiegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenet/mslwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnRklelnvvsspyhleitpsdmgnndriviqellkevaqmhrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgnkaifhlegfiakvmccld >7tfi_ABCE: title=ATOMIC MODEL OF THE S. CEREVISIAE CLAMP-CLAMP LOADER COMPLEX PCNA-RFC BOUND TO DNA WITH AN OPEN CLAMP organism=? DNA sequence DT(I11):DA(J20) DA(I12):DT(J19) DT(I13):DA(J18) DG(I14):DC(J17) DT(I15):DA(J16) DA(I16):DT(J15) DC(I17):DG(J14) DT(I18):DA(J13) DC(I19):DG(J12) DG(I20):DC(J11) DT(I21):DA(J10) DA(I22):DT(J9) DG(I23):DC(J8) DT(I24):DA(J7) DG(I25):DC(J6) DT(I26):DA(J5) DC(I27):DG(J4) DT(I28):DA(J3) DG(I29):DC(J2) DC(I30):DG(J1) chainA (285) PHE585 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) ARG632 23 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) GLN636 0 6 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) TRP638 0 3 52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) SER639 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) LEU641 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) PRO642 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (269) ARG272 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) LYS275 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainE prot.sequence reedklwtvkyaptnlqqvcgnkgsvmklknwlanwenskknsfkhagkdgsgvfraamlygppgigkttaahlvaqelgydileqnasdvrsktllnagvknaldnmsvvgyfkhqnlngkhfviimdevdgmggvgqlaqfcrktstplilicnernlpkmrpfdrvcldiqfrrpdansiksrlmtiairekfkldpnvidrliqttrgdirqvinllstistttktinhenineiskaweknialkpfdiahkmldgqiysdigsrnftlndkialyfddFdftplmiqenylstrpsvlkpgqshleavaeaancislgdivekkiRsseQlWSlLPlhavlssvypaskvaghmagrinftawlgqnsksakyyrllqeihyhtr/tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnqsnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfRvtKnlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnnka/ekrskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahkltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglaLidLiegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenet/mslwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgnndriviqellkevaqmhrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnslieCraVlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgnkaifhlegfiakvmccld >7tfj_ABCE: title=ATOMIC MODEL OF S. CEREVISIAE CLAMP-CLAMP LOADER COMPLEX PCNA-RFC BOUND TO DNA WITH A CLOSED CLAMP RING organism=? DNA sequence DT(I11):DA(J20) DA(I12):DT(J19) DT(I13):DA(J18) DG(I14):DC(J17) DT(I15):DA(J16) DA(I16):DT(J15) DC(I17):DG(J14) DT(I18):DA(J13) DC(I19):DG(J12) DG(I20):DC(J11) DT(I21):DA(J10) DA(I22):DT(J9) DG(I23):DC(J8) DT(I24):DA(J7) DG(I25):DC(J6) DT(I26):DA(J5) DC(I27):DG(J4) DT(I28):DA(J3) DG(I29):DC(J2) DC(I30):DG(J1) chainA (287) PHE582 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) ASP586 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG632 20 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) GLN636 0 8 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (343) TRP638 0 5 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) SER639 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) PRO642 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (269) ARG272 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) LYS275 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainE prot.sequence reedklwtvkyaptnlqqvcgnkgsvmklknwlanwenskknsfkhagkdgsgvfraamlygppgigkttaahlvaqelgydileqnasdvrsktllnagvknaldnmsvvgyfkhqnlngkhfviimdevdgmsggdrggvgqlaqfcrktstplilicnernlpkmrpfdrvcldiqfrrpdansiksrlmtiairekfkldpnvidrliqttrgdirqvinllstistttktinhenineiskaweknialkpfdiahkmldgqiysdigsrnftlndkialyFddfDftplmiqenylstrpsvlkpgqshleavaeaancislgdivekkiRsseQlWSllPlhavlssvypaskvaghmagrinftawlgqnsksakyyrllqeihyhtr/tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnqsnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfRvtKnlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnnka/ekrskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahkltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglaLidLiegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenet/mslwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgnndriviqellkevaqmhrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnslieCraVlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgnkaifhlegfiakvmccl >7tfk_BCE: title=ATOMIC MODEL OF S. CEREVISIAE CLAMP LOADER RFC BOUND TO TWO DNA MOLECULES, ONE AT THE 5'-RECESSED END AND THE OTHER AT THE 3'- RECESSED END organism=? DNA sequence DT(I11):DA(J20) DA(I12):DT(J19) DT(I13):DA(J18) DG(I14):DC(J17) DT(I15):DA(J16) DA(I16):DT(J15) DC(I17):DG(J14) DT(I18):DA(J13) DC(I19):DG(J12) DG(I20):DC(J11) DT(I21):DA(J10) chainB chainC chainE ( 81) ARG81 4 0 0 0 0 0 0 0 0 0 0 prot.sequence lslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnqsnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnnka/krskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahkltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenet/mslwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnRklelnvvsspyhleitpsdmgnndriviqellkevaqmhrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgnkaifhlegfiakvmccld >7tfl_A:post-AAA+_oligomerization_domain-like;P-loop_containing_nucleoside_triphosphate_hydrolases; title=ATOMIC MODEL OF S. CEREVISIAE CLAMP LOADER RFC BOUND TO DNA organism=? DNA sequence DA(J10):DT(I21) DC(J11):DG(I20) DG(J12):DC(I19) DA(J13):DT(I18) DG(J14):DC(I17) DT(J15):DA(I16) DA(J16):DT(I15) DC(J17):DG(I14) DA(J18):DT(I13) DT(J19):DA(I12) DA(J20):DT(I11) chainA (242) PHE582 0 0 0 0 0 0 0 0 0 0 3 (245) PHE585 0 0 0 0 0 0 0 0 0 2 0 (292) ARG632 0 0 0 0 0 0 0 0 0 0 4 (296) GLN636 0 0 0 0 0 0 0 0 0 22 6 (298) TRP638 0 0 0 0 0 0 0 0 0 48 2 (299) SER639 0 0 0 0 0 0 0 0 0 0 1 (302) PRO642 0 0 0 0 0 0 0 0 0 0 12 prot.sequence reedklwtvkyaptnlqqvcgnkgsvmklknwlanwenskdgsgvfraamlygppgigkttaahlvaqelgydilekhfviimdevdgmsggdrggvgqlaqfcrktstplilicnernlpkmrpfdrvcldiqfrrpdansiksrlmtiairekfkldpnvidrliqttrgdirqvinllstistttktinhenineiskaweknialkpfdiahkmldgqiysdigsrnftlndkialyFddFdftplmiqenylstrpsvlkpgqshleavaeaancislgdivekkiRsseQlWSllPlhavlssvypaskvaghmagrinftawlgqnsksak >7tfl_ABCE:post-AAA+_oligomerization_domain-like;P-loop_containing_nucleoside_triphosphate_hydrolases;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like; title=ATOMIC MODEL OF S. CEREVISIAE CLAMP LOADER RFC BOUND TO DNA organism=? DNA sequence DT(I11):DA(J20) DA(I12):DT(J19) DT(I13):DA(J18) DG(I14):DC(J17) DT(I15):DA(J16) DA(I16):DT(J15) DC(I17):DG(J14) DT(I18):DA(J13) DC(I19):DG(J12) DG(I20):DC(J11) DT(I21):DA(J10) chainA (242) PHE582 3 0 0 0 0 0 0 0 0 0 0 (245) PHE585 0 2 0 0 0 0 0 0 0 0 0 (292) ARG632 4 0 0 0 0 0 0 0 0 0 0 (296) GLN636 6 22 0 0 0 0 0 0 0 0 0 (298) TRP638 2 48 0 0 0 0 0 0 0 0 0 (299) SER639 1 0 0 0 0 0 0 0 0 0 0 (302) PRO642 12 0 0 0 0 0 0 0 0 0 0 chainB chainC chainE ( 80) ASN80 0 0 0 0 0 3 0 0 0 0 0 ( 81) ARG81 3 0 0 0 0 0 0 0 0 0 0 prot.sequence reedklwtvkyaptnlqqvcgnkgsvmklknwlanwenskdgsgvfraamlygppgigkttaahlvaqelgydilekhfviimdevdgmsggdrggvgqlaqfcrktstplilicnernlpkmrpfdrvcldiqfrrpdansiksrlmtiairekfkldpnvidrliqttrgdirqvinllstistttktinhenineiskaweknialkpfdiahkmldgqiysdigsrnftlndkialyFddFdftplmiqenylstrpsvlkpgqshleavaeaancislgdivekkiRsseQlWSllPlhavlssvypaskvaghmagrinftawlgqnsksak/lslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnqsnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnlEdsIqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeigltHmriLeGVgtYlqlasmlakihklnnka/rskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahkltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlKsiLeddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhLltkLaDIeySiskggndqiqgsavigaikasfen/mslwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasNRklelnvvsspyhleitpsdmgnndriviqellkevaqmrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgnkaifhlegfiakvmccld >7tfl_E:P-loop_containing_nucleoside_triphosphate_hydrolases;post-AAA+_oligomerization_domain-like; title=ATOMIC MODEL OF S. CEREVISIAE CLAMP LOADER RFC BOUND TO DNA organism=? DNA sequence DA(J10):DT(I21) DC(J11):DG(I20) DG(J12):DC(I19) DA(J13):DT(I18) DG(J14):DC(I17) DT(J15):DA(I16) DA(J16):DT(I15) DC(J17):DG(I14) DA(J18):DT(I13) DT(J19):DA(I12) DA(J20):DT(I11) chainE ( 80) ASN80 0 0 0 0 0 3 0 0 0 0 0 ( 81) ARG81 0 0 0 0 0 0 0 0 0 0 3 prot.sequence mslwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasNRklelnvvsspyhleitpsdmgnndriviqellkevaqmrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgnkaifhlegfiakvmccld >7tib_ABCE: title=STRUCTURE OF THE YEAST CLAMP LOADER (REPLICATION FACTOR C RFC) BOUND TO THE OPEN SLIDING CLAMP (PROLIFERATING CELL NUCLEAR ANTIGEN PCNA) AND PRIMER-TEMPLATE DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(I11):DA(J20) DA(I12):DT(J19) DT(I13):DA(J18) DG(I14):DC(J17) DT(I15):DA(J16) DA(I16):DT(J15) DC(I17):DG(J14) DT(I18):DA(J13) DC(I19):DG(J12) DG(I20):DC(J11) DT(I21):DA(J10) DA(I22):DT(J9) DG(I23):DC(J8) DT(I24):DA(J7) DG(I25):DC(J6) DT(I26):DA(J5) DC(I27):DG(J4) DT(I28):DA(J3) chainA (296) PHE582 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) PHE585 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (346) ARG632 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (350) GLN636 4 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (352) TRP638 0 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainE ( 77) ASN80 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence erdnvreedklwtvkyaptnlqqvcgnkgsvmklknwlanwenskknsfkhagkdgsgvfraamlygppgigkttaahlvaqelgydileqnasdvrsktllnagvknaldnmsvvgyfkhneeaqnlngkhfviimdevdgmsggdrggvgqlaqfcrktstplilicnernlpkmrpfdrvcldiqfrrpdansiksrlmtiairekfkldpnvidrliqttrgdirqvinllstistttktinhenineiskaweknialkpfdiahkmldgqiysdigsrnftlndkialyFddFdftplmiqenylstrpsvlkpgqshleavaeaancislgdivekkiRsseQlWsllplhavlssvypaskvaghmagrinftawlgqnsksakyyrllqeihyhtrlgtstdkiglrldylptfrkrlldpflkqgadaissvievmddyyltkedwdsimeffvgpdvttaiikkipatvksgftrkynsmthpv/tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnqsnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrIleGvgtylqlasmlakihklnnk/skenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahkltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltklAdiEysiskggndqiqgsavigaikasfenet/wvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasNrklelnvvsspyhleitpsdmgnndriviqellkevaqmeqvdfqhrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgnkaifhlegfiakvmccl >7tid_ABCE:post-AAA+_oligomerization_domain-like;P-loop_containing_nucleoside_triphosphate_hydrolases;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;DNA_clamp;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like;post-AAA+_oligomerization_domain-like; title=STRUCTURE OF THE YEAST CLAMP LOADER (REPLICATION FACTOR C RFC) BOUND TO THE SLIDING CLAMP (PROLIFERATING CELL NUCLEAR ANTIGEN PCNA) AND PRIMER-TEMPLATE DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DT(I11):DA(J20) DA(I12):DT(J19) DT(I13):DA(J18) DG(I14):DC(J17) DT(I15):DA(J16) DA(I16):DT(J15) DC(I17):DG(J14) DT(I18):DA(J13) DC(I19):DG(J12) DG(I20):DC(J11) DT(I21):DA(J10) DA(I22):DT(J9) DG(I23):DC(J8) DT(I24):DA(J7) DG(I25):DC(J6) DT(I26):DA(J5) DC(I27):DG(J4) DT(I28):DA(J3) chainA (144) ARG434 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 (292) PHE582 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) PHE585 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (346) GLN636 6 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) TRP638 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainE prot.sequence vreedklwtvkyaptnlqqvcgnkgsvmklknwlanwenskknsfkhagkdgsgvfraamlygppgigkttaahlvaqelgydileqnasdvrsktllnagvknaldnmsvvgyfkhneeaqnlngkhfviimdevdgmsggdRggvgqlaqfcrktstplilicnernlpkmrpfdrvcldiqfrrpdansiksrlmtiairekfkldpnvidrliqttrgdirqvinllstistttktinhenineiskaweknialkpfdiahkmldgqiysdigsrnftlndkialyFddFdftplmiqenylstrpsvlkpgqshleavaeaancislgdivekkirsseQlWsllplhavlssvypaskvaghmagrinftawlgqnsksakyyrllqeihyhtrlgtstdkiglrldylptfrkrlldpflkqgadaissvievmddyyltkedwdsimeffvgpdvttaiikkipatvksgftrkyns/tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnqSnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglThmRilegvgtylqlasmlakihklnnk/skenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahKltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlLtkLadieysiskggndqiqgsavigaikasfenet/wvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgnndriviqellkevaqmehrykcviineansltkdaqaalrrtmEkysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfsLldVetlnttnkssiieyssvfderlslgnkaifhlegfiakvmccl >7tjf_ABCDE:P-loop_containing_nucleoside_triphosphate_hydrolases;Inhibitor_of_apoptosis_IAP_repeat; title=S. CEREVISIAE ORC BOUND TO 84 BP ARS1 DNA organism=? DNA sequence DT(G21):DA(H64) DA(G22):DT(H63) DC(G23):DG(H62) DA(G24):DT(H61) DG(G25):DC(H60) DA(G26):DT(H59) DT(G27):DA(H58) DT(G28):DA(H57) DT(G29):DA(H56) DT(G30):DA(H55) DA(G31):DT(H54) DT(G32):DA(H53) DG(G33):DC(H52) DT(G34):DA(H51) DT(G35):DA(H50) DT(G36):DA(H49) DA(G37):DT(H48) DG(G38):DC(H47) DA(G39):DT(H46) DT(G40):DA(H45) DC(G41):DG(H44) DT(G42):DA(H43) DT(G43):DA(H42) DT(G44):DA(H41) DT(G45):DA(H40) DA(G46):DT(H39) DT(G47):DA(H38) DG(G48):DC(H37) DC(G49):DG(H36) DT(G50):DA(H35) DT(G51):DA(H34) DG(G52):DC(H33) DC(G53):DG(H32) DT(G54):DA(H31) DT(G55):DA(H30) DT(G56):DA(H29) DT(G57):DA(H28) DC(G58):DG(H27) DA(G59):DT(H26) DA(G60):DT(H25) DA(G61):DT(H24) chainA ( 5) PHE360 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LYS362 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ARG367 0 0 0 0 0 0 0 0 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR372 0 0 0 0 0 0 2 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 4 0 0 0 0 0 0 0 0 ( 23) THR255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (153) TRP396 0 0 0 0 0 0 0 0 0 0 0 0 9 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD (389) PHE485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (390) TYR486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ASN489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) TYR490 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (330) ARG360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 0 0 0 (333) TYR363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 3 0 0 0 0 0 (336) ARG366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 3 0 0 0 0 0 0 prot.sequence virkFtKknvaRakkkYtpfskrfksiaaipdltslpefygnsrfenklkttqkhqivetifskvkkqlnssylparenefasiylsaysaiesdsattiyvagtpgvgktltvrevvkellsssaqreipdflyveinglkmvkptdcyetlwnkvsgerltwaasmeslefyfkrvpknkkktivvlldeldamvtksqdimynffnwttyenakliviavantmdlperqlgnkitsrigftrimftgytheelkniidlrlkglndsffyvdtktgnailidvrkvrlrmsadaieiasrkvasvsgdarralkvckraaeiaekhymakhgygydgvqtvhithvmkalnetlnshvitfmtrlsftaklfiyallnlmkkngsqeqelgdivdeikllievngsnkfvmeiaktlfqqgsdniseqlriiswdfvlnqlldagilfkqtmkndriccvklnisveeakramnedetlrnl/tksassfldtfegyfdqrkivRTnaksrhtmsmapdvtreefslvsnffnenfqkrprqklfeiqkkmfpqywfeltqgfsllfygvgskrnfleefaidylspkiaysqlvnsipclilngynpscnyrdvfkeitdllvpaeltrsetkyWgnhvilqiqkmidfyknqpldiklilvvhnldgpsirkntfqtmlsflsvirqiaivastdhiyapllwdnmkaqnynfvfhdisnfepstvestfqdvmk/adaqrshytvypslphipfvkLLsgkesevnvekrwelyhqlhshfhdqvdhiidnieadlkaeisdllysrcfntifllgsdsttkielkdessrynvlieltpkespnvrmmlrrsmyklysaadaendvsydlslvenfkrlfgkdlamVfnfkdvdsinfntldnfiillksafkydhvkislifnintnlsnieknlrqstirllkrnyhkldvssnkgfkygnqifqsfldtvdgklnlsdrfvefilskmanntnhnlqlltkmldyslmsyffqnafsvfidpvnvdflnddylkilsrcptfmffveglikqhapadeilsllleeffveflvrenpinghakfvarfleeelnitnfnlielyhnlligkldsyldrwsackeykdrlhfepidtifqelftldnrsglltqsifpsyksniednllsweqvlpsldsgdldkimapvlgqlfklyreanmtiniydfyiafretlpkeeilnfirkdpsntkllelaetpdafdkvalilfmqaifafenmglikfqstksydlvekcvwrgi/dpgfgslqrrllqqlygtlptdekiiftylqdcqqeidriikqsiiqkeshsvilvgprqsyktylldyelsllqqsykeqfitirlngfihseqtaingiatqleqqlqkihtissgsltevfekilllldtkitvvfifdeidtfagpvrqtllynlfdmvehsrvpvcifgcttklnileylekrvksrfsqrviympqiqnlddmvdavrnlltvrseispwvsqwnetlekelsdprsnlnrhirmnfetfrslptlknsiiplvatsknfgslctaikscsfldiynknqlsnnltgrlqslsdlelailisaarvalrakdgsfnfnlayaeyekmikainsrtiklwlkkdvknvwenlvqldffteksavglrdnataaFYasNYqfqgtmipfdlrsyqmqiilqelrriipksnmyyswtql/nvttpevafreyqtnclasyisadpditpsnlilqgysgtgktytlkkyfnanpnlhavwlepvelvswkpllqaiartvqyklktlypnipttdydplqveepfllvktlhnifvqyeslqektclflildgfdslqdldaalfnkyiklnellpkdskinikfiytmletsflqrysthciptvmfprynvdevstilvmsrcgelmedsclrkriieedqfqnvaanfihlivqafhsytgndifalndlidfkwpkyvsritkenifeplalyksaiklflstddnlsdlsiiskylliasyicsyleprydasifsrktriiqgRaaYgrRkkkevnprylqpslfaierllaifqaifpilsalreeslmkanievfqnlselhtlkliattmnknidylspkvrwkvnvpweiikeisesvhfnisdyfsdih >7tjf_E:P-loop_containing_nucleoside_triphosphate_hydrolases; title=S. CEREVISIAE ORC BOUND TO 84 BP ARS1 DNA organism=? DNA sequence DT(H24):DA(G61) DT(H25):DA(G60) DT(H26):DA(G59) DG(H27):DC(G58) DA(H28):DT(G57) DA(H29):DT(G56) DA(H30):DT(G55) DA(H31):DT(G54) DG(H32):DC(G53) DC(H33):DG(G52) DA(H34):DT(G51) DA(H35):DT(G50) DG(H36):DC(G49) DC(H37):DG(G48) DA(H38):DT(G47) DT(H39):DA(G46) DA(H40):DT(G45) DA(H41):DT(G44) DA(H42):DT(G43) DA(H43):DT(G42) DG(H44):DC(G41) DA(H45):DT(G40) DT(H46):DA(G39) DC(H47):DG(G38) DT(H48):DA(G37) DA(H49):DT(G36) DA(H50):DT(G35) DA(H51):DT(G34) DC(H52):DG(G33) DA(H53):DT(G32) DT(H54):DA(G31) DA(H55):DT(G30) DA(H56):DT(G29) DA(H57):DT(G28) DA(H58):DT(G27) DT(H59):DA(G26) DC(H60):DG(G25) DT(H61):DA(G24) DG(H62):DC(G23) DT(H63):DA(G22) DA(H64):DT(G21) chainE (330) ARG360 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) TYR363 0 0 0 0 0 3 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG366 0 0 0 0 0 0 3 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nvttpevafreyqtnclasyisadpditpsnlilqgysgtgktytlkkyfnanpnlhavwlepvelvswkpllqaiartvqyklktlypnipttdydplqveepfllvktlhnifvqyeslqektclflildgfdslqdldaalfnkyiklnellpkdskinikfiytmletsflqrysthciptvmfprynvdevstilvmsrcgelmedsclrkriieedqfqnvaanfihlivqafhsytgndifalndlidfkwpkyvsritkenifeplalyksaiklflstddnlsdlsiiskylliasyicsyleprydasifsrktriiqgRaaYgrRkkkevnprylqpslfaierllaifqaifpilsalreeslmkanievfqnlselhtlkliattmnknidylspkvrwkvnvpweiikeisesvhfnisdyfsdih >7tjh_ABCDEI:P-loop_containing_nucleoside_triphosphate_hydrolases;Inhibitor_of_apoptosis_IAP_repeat;"Winged_helix"_DNA-binding_domain; title=S. CEREVISIAE ORC BOUND TO 84 BP ARS1 DNA AND CDC6 (STATE 1) WITH FLEXIBLE ORC6 N-TERMINAL DOMAIN organism=? DNA sequence DT(G21):DA(H64) DA(G22):DT(H63) DC(G23):DG(H62) DA(G24):DT(H61) DG(G25):DC(H60) DA(G26):DT(H59) DT(G27):DA(H58) DT(G28):DA(H57) DT(G29):DA(H56) DT(G30):DA(H55) DA(G31):DT(H54) DT(G32):DA(H53) DG(G33):DC(H52) DT(G34):DA(H51) DT(G35):DA(H50) DT(G36):DA(H49) DA(G37):DT(H48) DG(G38):DC(H47) DA(G39):DT(H46) DT(G40):DA(H45) DC(G41):DG(H44) DT(G42):DA(H43) DT(G43):DA(H42) DT(G44):DA(H41) DT(G45):DA(H40) DA(G46):DT(H39) DT(G47):DA(H38) DG(G48):DC(H37) DC(G49):DG(H36) DT(G50):DA(H35) DT(G51):DA(H34) DG(G52):DC(H33) DC(G53):DG(H32) DT(G54):DA(H31) DT(G55):DA(H30) DT(G56):DA(H29) DT(G57):DA(H28) DC(G58):DG(H27) DA(G59):DT(H26) DA(G60):DT(H25) DA(G61):DT(H24) chainA ( 5) PHE360 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LYS362 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ARG367 0 0 0 0 0 0 0 0 14 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR372 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 20) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 4 0 0 0 0 0 0 0 0 ( 21) THR255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 (150) TRP396 0 0 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD (390) PHE485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) TYR486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) ASN489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) TYR490 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (331) ARG360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 (334) TYR363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 8 1 0 0 0 0 (337) ARG366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 1 0 0 0 0 0 0 chainI prot.sequence virkFtKknvaRakkkYtpfskrfksiaaipdltslpefygnrfenklkttqkhqivetifskvkkqlnsslparenefasiylsaysaiesdsattiyvagtpgvgktltvrevvkellsssaqreipdflyveinglkmvkptdcyetlwnkvsgerltwaasmeslefyfkrvpknkkktivvlldeldamvtksqdimynffnwttyenakliviavantmdlperqlgnkitsrigftrimftgytheelkniidlrlkglndsffyvdtktgnailivrkvrlrmsadaieiasrkvasvsgdarralkvckraaeiaekhymakhgygydgvqtvhithvmkalnetlnshvitfmtrlsftaklfiyallnlmkkngsqeqelgdivdeikllievngsnkfvmeiaktlfqqgsdniseqlriiswdfvlnqlldagilfkqtmkndriccvklnisveeakramnedetlrnl/sassfldtfegyfdqrkivRTnaksrhtmsmapdvtreefslvsnffnenfqkrprqklfeiqkkmfpqywfeltqgfsllfygvgskrnfleefaidylspkiaysqlnsipclilngynpscnyrdvfkeitdllvpaeltrsetkyWgnhvilqiqkmidfyknqpldiklilvvhnldgpsirkntfqtmlsflsvirqiaivastdhiyapllwdnmkaqnynfvfhdisnfepstvestfqdvmk/adaqrshytvypslphipfVKllsgkesevnvekrwelyhqlhshfhdqvdhiidnieadlkaeisdllysrcfntifllgsdsttkielkdessrynvlieltpkespnvrmmlrrsmyklysaadaeendvsydlslvenfkrlfgkDlamvfnfkdvdsinfntldnfiillksafkydhvkislifnintnlsnieknlrqstirllkrnyhkldvssnkgfkygnqifqsfldtvdgklnlsdrfvefilskmanntnhnlqlltkmldyslmsyffqnafsvfidpvnvdflnddylkilsrcptfmffveglikqnrgleeffveflvrenpinghakfvarfleeelnitnfnlielyhnlligkldsyldrwsackeykdrlhfepidtifqelftldnrsglltqsifpsyksniednllsweqvlpslsgdldkimapvlgqlfklyreanmtiniydfyiafretlpkeeilnfirkdpsntkllelaetpdafdkvalilfmqaifafenmglikfqstksydlvekcvwrgi/dpgfgslqrrllqqlygtlptdekiiftylqdcqqeidriikqsiiqkeshsvilvgprqsyktylldyelsllqqsykeqfitirlngfihseqtaingiatqleqqlqkihtissgsltevfekillllditkitvvfifdeidtfagpvrqtllynlfdmvehsrvpvcifgcttklnileylekrvksrfsqrviympqiqnlddmvdavrnlltvrseispwvsqwnetlekelsdprsnlnrhirmnfetfrslptlknsiiplvatsknfgslctaikscsfldiynknqlsnnltgrlqslsdlelailisaarvalrakdgsfnfnlayaeyekmikainsrtiklwlkkdvknvwenlvqldffteksavglrdnataaFYasNYqfqgtmipfdlrsyqmqiilqelrriipksnmyyswtql/mnvttpevafreyqtnclasyisadpditpsnlilqgysgtgktytlkkyfnanpnlhavwlepvelvswkpllqaiartvqyklktlypnipttdydplqveepfllvktlhnifvqyeslqektclflildgfdslqdldaalfnkyiklnellpkdskinikfiytmletsflqrysthciptvmfprynvdevstilvmsrcgelmedsclrkriieeddqfqnvaanfihlivqafhsytgndifalndlidfkwpkyvsritkenifeplalyksaiklflstddnldlsiiskylliasyicsyleprydasifsrktriiqgRaaYgrRkkkevnprylqpslfaierllaifqaifpialreeslmkanievfqnlselhtlkliattmnknidylspkvrwkvnvpweiikeisesvhfnisdyfsdih/siflrtkallqksselgalpartaeyeqvmnflakaisehrsdslyitgppgtgktaqldmiirqkflqnlswfelpdgrlesvavtsincislgepssifqkifdsfqdlngptlqiknmqhlqkflepyttfvvvldemdrllhantsetqsvrtilelfllaklptvsfvligmansgllpqtivfqpytaeqmyeiviqkmsslptiifqpmaikfaakkcagntgdlrklfdvlrgsieiyelekkiglnyiakvfskfvnnnstrtriaklniqqklilctiiqslklnsdatidesfdhyikaitktdtlaplqrnefleictIleTcgLvsikktkckgktkrfvdkidvdldmrefydemtkisilkpfl >7tji_ABCDEI:P-loop_containing_nucleoside_triphosphate_hydrolases;Inhibitor_of_apoptosis_IAP_repeat;"Winged_helix"_DNA-binding_domain; title=S. CEREVISIAE ORC BOUND TO 84 BP ARS1 DNA AND CDC6 (STATE 2) WITH FLEXIBLE ORC6 N-TERMINAL DOMAIN organism=? DNA sequence DT(G21):DA(H64) DA(G22):DT(H63) DC(G23):DG(H62) DA(G24):DT(H61) DG(G25):DC(H60) DA(G26):DT(H59) DT(G27):DA(H58) DT(G28):DA(H57) DT(G29):DA(H56) DT(G30):DA(H55) DA(G31):DT(H54) DT(G32):DA(H53) DG(G33):DC(H52) DT(G34):DA(H51) DT(G35):DA(H50) DT(G36):DA(H49) DA(G37):DT(H48) DG(G38):DC(H47) DA(G39):DT(H46) DT(G40):DA(H45) DC(G41):DG(H44) DT(G42):DA(H43) DT(G43):DA(H42) DT(G44):DA(H41) DT(G45):DA(H40) DA(G46):DT(H39) DT(G47):DA(H38) DG(G48):DC(H37) DC(G49):DG(H36) DT(G50):DA(H35) DT(G51):DA(H34) DG(G52):DC(H33) DC(G53):DG(H32) DT(G54):DA(H31) DT(G55):DA(H30) DT(G56):DA(H29) DT(G57):DA(H28) DC(G58):DG(H27) DA(G59):DT(H26) DA(G60):DT(H25) DA(G61):DT(H24) chainA ( 5) PHE360 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LYS362 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ARG367 0 0 0 0 0 0 0 0 14 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR372 0 0 0 0 0 0 1 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 19) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 2 0 0 0 0 0 0 0 0 ( 20) THR255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (148) TRP396 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD (390) PHE485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) TYR486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) ASN489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) TYR490 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (329) ARG360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 (332) TYR363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 0 0 0 0 0 (335) ARG366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 (398) LYS439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI prot.sequence virkFtKknvaRakkkYtpfskrfksiaaipdltslpefygnsrfenklkttqkhqivetifskvkkqlnsslparenefasiylsaysaiesdsattiyvagtpgvgktltvrevvkellsssaqreipdflyveinglkmvkptdcyetlwnkvsgerltwaasmeslefyfkrvpknkkktivvlldeldamvtksqdimynffnwttyenakliviavantmdlperqlgnkitsrigftrimftgytheelkniidlrlkglndsffyvdtktgnailidvrkvrlrmsadaieiasrkvasvsgdarralkvckraaeiaekhymakhgygydgvqtvhithvmkalnetlnshvitfmtrlsftaklfiyallnlmkkngsqeqelgdivdeikllievngsnkfvmeiaktlfqqgsdniseqlriiswdfvlnqlldagilfkqtmkndriccvklnisveeakramnedetlrnl/assfldtfegyfdqrkivRTnaksrhtmsmapdvtreefslvsnffnenfqkrprqklfeiqkkmfpqywfeltqgfsllfygvgskrnfleefaidylspkiaysqlsipclilngynpscnyrdvfkeitdllvpaeltrsetkyWgnhvilqiqkmidfyknqpldiklilvvhnldgpsirkntfqtmlsflsvirqiaivastdhiyapllwdnmkaqnynfvfhdisnfepstvestfqdvmk/adaqrshytvypslhipfVKllsgkesevnvekrwelyhqlhshfhdqvdhiidnieadlkaeisdllysrrcfntifllgsdsttkielkdessrynvlieltpkespnvrmmlrrsmyklysaadaeendvsydlslvenfkrlfGkdlamvfnfkdvdsinfntldnfiillksafkydhvkislifnintnlsnieknlrqstirllkrnyhkldvssnkgfkygnqifqsfldtvdgklnlsdrfvefilskmanntnhnlqlltkmldyslmsyffqnafsvfidpvnvdflnddylkilsrcptfmffveglikleeffveflvrenpinghakfvarfleeelnitnfnlielyhnlligkldsyldrwsackeykdrlhfepidtifqelftldnrsglltqsifpsyksniednllsweqvlpsllsgdldkimapvlgqlfklyreanmtiniydfyiafretlpkeeilnfirkdpsntkllelaetpdafdkvalilfmqaifafenmglikfqstksydlvekcvwrgi/dpgfgslqrrllqqlygtlptdekiiftylqdcqqeidriikqsiiqkeshsvilvgprqsyktylldyelsllqqsykeqfitirlngfihseqtaingiatqleqqlqkihtissgsltevfekilllldsitkitvvfifdeidtfagpvrqtllynlfdmvehsrvpvcifgcttklnileylekrvksrfsqrviympqiqnlddmvdavrnlltvrseispwvsqwnetlekelsdprsnlnrhirmnfetfrslptlknsiiplvatsknfgslctaikscsfldiynknqlsnnltgrlqslsdlelailisaarvalrakdgsfnfnlayaeyekmikainsriklwlkkdvknvwenlvqldffteksavglrdnataaFYasNYqfqgtmipfdlrsyqmqiilqelrriipksnmyyswtql/nvttpevafreyqtnclasyisadpditpsnlilqgysgtgktytlkkyfnanpnlhavwlepvelvswkpllqaiartvqyklktlypnipttdydplqveepfllvktlhnifvqyeslqektclflildgfdslqdldaalfnkyiklnellpkdskinikfiytmletsflqrysthciptvmfprynvdevstilvmsrcgelmedsclrkriieeddqfqnvaanfihlivqafhsytgndifalndlidfkwpkyvsritkenifeplalyksaiklflstddnllsiiskylliasyicsyleprydasifsrktriiqgRaaYgrRkkkevnprylqpslfaierllaifqaifpialreeslmkanievfqnlselhtlkliattmnKnidylspkvrwkvnvpweiikeisesvhfnisdyfs/siflrtkallqksselvdgalpartaeyeqvmnflakaisehrsdslyitgppgtgktaqldmiirqkflqnlswfelpdgrlesvavtsincislgepssifqkifdsfqdgptlqiknmqhlqkflepytfvvvldemdrllhantsetqsvrtilelfllaklptvsfvligmansldmlpqtivfqpytaeqmyeiviqkmsslptiifqpmaikfaakkcagntgdlrklfdvlrgsieiyelekkiglnyiakvfskfvstrtriaklniqqklilctiiqslklnsdatidesfdhyikaitktdtlaplqrnefleictiLetCglVsikktkckgktkrfvdkidvdldmrefydemtkisilkpfl >7tji_B: title=S. CEREVISIAE ORC BOUND TO 84 BP ARS1 DNA AND CDC6 (STATE 2) WITH FLEXIBLE ORC6 N-TERMINAL DOMAIN organism=? DNA sequence DT(G21):DA(H64) DA(G22):DT(H63) DC(G23):DG(H62) DA(G24):DT(H61) DG(G25):DC(H60) DA(G26):DT(H59) DT(G27):DA(H58) DT(G28):DA(H57) DT(G29):DA(H56) DT(G30):DA(H55) DA(G31):DT(H54) DT(G32):DA(H53) DG(G33):DC(H52) DT(G34):DA(H51) DT(G35):DA(H50) DT(G36):DA(H49) DA(G37):DT(H48) DG(G38):DC(H47) DA(G39):DT(H46) DT(G40):DA(H45) DC(G41):DG(H44) DT(G42):DA(H43) DT(G43):DA(H42) DT(G44):DA(H41) DT(G45):DA(H40) DA(G46):DT(H39) DT(G47):DA(H38) DG(G48):DC(H37) DC(G49):DG(H36) DT(G50):DA(H35) DT(G51):DA(H34) DG(G52):DC(H33) DC(G53):DG(H32) DT(G54):DA(H31) DT(G55):DA(H30) DT(G56):DA(H29) DT(G57):DA(H28) DC(G58):DG(H27) DA(G59):DT(H26) DA(G60):DT(H25) DA(G61):DT(H24) chainB ( 19) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 2 0 0 0 0 0 0 0 0 ( 20) THR255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (148) TRP396 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence assfldtfegyfdqrkivRTnaksrhtmsmapdvtreefslvsnffnenfqkrprqklfeiqkkmfpqywfeltqgfsllfygvgskrnfleefaidylspkiaysqlsipclilngynpscnyrdvfkeitdllvpaeltrsetkyWgnhvilqiqkmidfyknqpldiklilvvhnldgpsirkntfqtmlsflsvirqiaivastdhiyapllwdnmkaqnynfvfhdisnfepstvestfqdvmk >7tjj_ABCDEI:P-loop_containing_nucleoside_triphosphate_hydrolases;Inhibitor_of_apoptosis_IAP_repeat;"Winged_helix"_DNA-binding_domain; title=S. CEREVISIAE ORC BOUND TO 84 BP ARS1 DNA AND CDC6 (STATE 1) WITH DOCKED ORC6 N-TERMINAL DOMAIN organism=? DNA sequence DT(G21):DA(H64) DA(G22):DT(H63) DC(G23):DG(H62) DA(G24):DT(H61) DG(G25):DC(H60) DA(G26):DT(H59) DT(G27):DA(H58) DT(G28):DA(H57) DT(G29):DA(H56) DT(G30):DA(H55) DA(G31):DT(H54) DT(G32):DA(H53) DG(G33):DC(H52) DT(G34):DA(H51) DT(G35):DA(H50) DT(G36):DA(H49) DA(G37):DT(H48) DG(G38):DC(H47) DA(G39):DT(H46) DT(G40):DA(H45) DC(G41):DG(H44) DT(G42):DA(H43) DT(G43):DA(H42) DT(G44):DA(H41) DT(G45):DA(H40) DA(G46):DT(H39) DT(G47):DA(H38) DG(G48):DC(H37) DC(G49):DG(H36) DT(G50):DA(H35) DT(G51):DA(H34) DG(G52):DC(H33) DC(G53):DG(H32) DT(G54):DA(H31) DT(G55):DA(H30) DT(G56):DA(H29) DT(G57):DA(H28) DC(G58):DG(H27) DA(G59):DT(H26) DA(G60):DT(H25) DA(G61):DT(H24) chainA ( 5) PHE360 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LYS362 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ARG367 0 0 0 0 0 0 0 0 14 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR372 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 6 0 0 0 0 0 0 0 0 ( 22) THR255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (150) TRP396 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD (389) PHE485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (390) TYR486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ASN489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) TYR490 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (314) ARG344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (330) ARG360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 14 2 0 0 0 (333) TYR363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 1 0 0 0 0 (336) ARG366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 3 0 0 0 0 0 0 chainI prot.sequence virkFtKknvaRakkkYtpfskrfksiaaipdltslpefygnsrfenklkttqkhqivetifskvkkqlnssylparenefasiylsaysaiesdsattiyvagtpgvgktltvrevvkellsssaqreipdflyveinglkmvkptdcyetlwnkvsgerltwaasmeslefyfkrvpknkkktivvlldeldamvtksqdimynffnwttyenakliviavantmdlperqlgnkitsrigftrimftgytheelkniidlrlkglndsffyvdtktgnailivrkvrlrmsadaieiasrkvasvsgdarralkvckraaeiaekhymakhgygydgvqtvhithvmkalnetlnshvitfmtrlsftaklfiyallnlmkkngsqeqelgdivdeikllievngsnkfvmeiaktlfqqgsdniseqlriiswdfvlnqlldagilfkqtmkndriccvklnisveeakramnedetlrnl/ksassfldtfegyfdqrkivRTnaksrhtmsmapdvtreefslvsnffnenfqkrprqklfeiqkkmfpqywfeltqgfsllfygvgskrnfleefaidylspkiaysqlsipclilngynpscnyrdvfkeitdllvpaeltrsetkyWgnhvilqiqkmidfyknqpldiklilvvhnldgpsirkntfqtmlsflsvirqiaivastdhiyapllwdnmkaqnynfvfhdisnfepstvestfqdvmk/adaqrshytvypslphipfvKLlsgkesevnvekrwelyhqlhshfhdqvdhiidnieadlkaeisdllysrcfntifllgsdsttkielkdessrynvlieltpkespnvrmmlrrsmyklysaadaeendvsydlslvenfkrlfgkDlamvfnfkdvdsinfntldnfiillksafkydhvkislifnintnlsnieknlrqstirllkrnyhkldvssnkgfkygnqifqsfldtvdgklnlsdrfvefilskmanntnhnlqlltkmldyslmsyffqnafsvfidpvnvdflnddylkilsrcptfmffveglikqhleeffveflvrenpinghakfvarfleeelnitnfnlielyhnlligkldsyldrwsackeykdrlhfepidtifqelftldnrsglltqsifpsyksniednllsweqvlpslsgdldkimapvlgqlfklyreanmtiniydfyiafretlpkeeilnfirkdpsntkllelaetpdafdkvalilfmqaifafenmglikfqstksydlvekcvwrgi/dpgfgslqrrllqqlygtlptdekiiftylqdcqqeidriikqsiiqkeshsvilvgprqsyktylldyelsllqqsykeqfitirlngfihseqtaingiatqleqqlqkihtissgsltevfekilllldtkitvvfifdeidtfagpvrqtllynlfdmvehsrvpvcifgcttklnileylekrvksrfsqrviympqiqnlddmvdavrnlltvrseispwvsqwnetlekelsdprsnlnrhirmnfetfrslptlknsiiplvatsknfgslctaikscsfldiynknqlsnnltgrlqslsdlelailisaarvalrakdgsfnfnlayaeyekmikainsrtiklwlkkdvknvwenlvqldffteksavglrdnataaFYasNYqfqgtmipfdlrsyqmqiilqelrriipksnmyyswtql/nvttpevafreyqtnclasyisadpditpsnlilqgysgtgktytlkkyfnanpnlhavwlepvelvswkpllqaiartvqyklktlypnipttdydplqveepfllvktlhnifvqyeslqektclflildgfdslqdldaalfnkyiklnellpkdskinikfiytmletsflqrysthciptvmfprynvdevstilvmsrcgelmedsclrkriieeddqfqnvaanfihlivqafhsytgndifalndlidfkwpkyvsritkenifeplalyksaiklflstddnldlsiiskylliasyicsylepRydasifsrktriiqgRaaYgrRkkkevnprylqpslfaierllaifqaifpialreeslmkanievfqnlselhtlkliattmnknidylspkvrwkvnvpweiikeisesvhfnisdyfsdih/siflrtkallqksselgalpartaeyeqvmnflakaisehrsdslyitgppgtgktaqldmiirqkflqnlswfelpdgrlesvavtsincislgepssifqkifdsfqdlngptlqiknmqhlqkflepyttfvvvldemdrllhantsetqsvrtilelfllaklptvsfvligmansgllpqtivfqpytaeqmyeiviqkmsslptiifqpmaikfaakkcagntgdlrklfdvlrgsieiyelekgkiglnyiakvfskfvnnnstrtriaklniqqklilctiiqslklnsdatidesfdhyikaitKtdtlaplqrnefleiCtiLetCglvsikktkckgktkrfvdkidvdldmrefydemtkisilkpfl >7tjj_D:P-loop_containing_nucleoside_triphosphate_hydrolases; title=S. CEREVISIAE ORC BOUND TO 84 BP ARS1 DNA AND CDC6 (STATE 1) WITH DOCKED ORC6 N-TERMINAL DOMAIN organism=? DNA sequence DT(G21):DA(H64) DA(G22):DT(H63) DC(G23):DG(H62) DA(G24):DT(H61) DG(G25):DC(H60) DA(G26):DT(H59) DT(G27):DA(H58) DT(G28):DA(H57) DT(G29):DA(H56) DT(G30):DA(H55) DA(G31):DT(H54) DT(G32):DA(H53) DG(G33):DC(H52) DT(G34):DA(H51) DT(G35):DA(H50) DT(G36):DA(H49) DA(G37):DT(H48) DG(G38):DC(H47) DA(G39):DT(H46) DT(G40):DA(H45) DC(G41):DG(H44) DT(G42):DA(H43) DT(G43):DA(H42) DT(G44):DA(H41) DT(G45):DA(H40) DA(G46):DT(H39) DT(G47):DA(H38) DG(G48):DC(H37) DC(G49):DG(H36) DT(G50):DA(H35) DT(G51):DA(H34) DG(G52):DC(H33) DC(G53):DG(H32) DT(G54):DA(H31) DT(G55):DA(H30) DT(G56):DA(H29) DT(G57):DA(H28) DC(G58):DG(H27) DA(G59):DT(H26) DA(G60):DT(H25) DA(G61):DT(H24) chainD (389) PHE485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (390) TYR486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ASN489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) TYR490 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dpgfgslqrrllqqlygtlptdekiiftylqdcqqeidriikqsiiqkeshsvilvgprqsyktylldyelsllqqsykeqfitirlngfihseqtaingiatqleqqlqkihtissgsltevfekilllldtkitvvfifdeidtfagpvrqtllynlfdmvehsrvpvcifgcttklnileylekrvksrfsqrviympqiqnlddmvdavrnlltvrseispwvsqwnetlekelsdprsnlnrhirmnfetfrslptlknsiiplvatsknfgslctaikscsfldiynknqlsnnltgrlqslsdlelailisaarvalrakdgsfnfnlayaeyekmikainsrtiklwlkkdvknvwenlvqldffteksavglrdnataaFYasNYqfqgtmipfdlrsyqmqiilqelrriipksnmyyswtql >7tjk_ABCDEI:P-loop_containing_nucleoside_triphosphate_hydrolases;Inhibitor_of_apoptosis_IAP_repeat;"Winged_helix"_DNA-binding_domain; title=S. CEREVISIAE ORC BOUND TO 84 BP ARS1 DNA AND CDC6 (STATE 2) WITH DOCKED ORC6 N-TERMINAL DOMAIN organism=? DNA sequence DT(G21):DA(H64) DA(G22):DT(H63) DC(G23):DG(H62) DA(G24):DT(H61) DG(G25):DC(H60) DA(G26):DT(H59) DT(G27):DA(H58) DT(G28):DA(H57) DT(G29):DA(H56) DT(G30):DA(H55) DA(G31):DT(H54) DT(G32):DA(H53) DG(G33):DC(H52) DT(G34):DA(H51) DT(G35):DA(H50) DT(G36):DA(H49) DA(G37):DT(H48) DG(G38):DC(H47) DA(G39):DT(H46) DT(G40):DA(H45) DC(G41):DG(H44) DT(G42):DA(H43) DT(G43):DA(H42) DT(G44):DA(H41) DT(G45):DA(H40) DA(G46):DT(H39) DT(G47):DA(H38) DG(G48):DC(H37) DC(G49):DG(H36) DT(G50):DA(H35) DT(G51):DA(H34) DG(G52):DC(H33) DC(G53):DG(H32) DT(G54):DA(H31) DT(G55):DA(H30) DT(G56):DA(H29) DT(G57):DA(H28) DC(G58):DG(H27) DA(G59):DT(H26) DA(G60):DT(H25) DA(G61):DT(H24) chainA ( 5) PHE360 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LYS362 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ARG367 0 0 0 0 0 0 0 0 14 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) TYR372 0 0 0 0 0 0 2 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 19) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 3 0 0 0 0 0 0 0 ( 20) THR255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (148) TRP396 0 0 0 0 0 0 0 0 0 0 0 0 9 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD (389) PHE485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (390) TYR486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) ASN489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) TYR490 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (329) ARG360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 (332) TYR363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 (335) ARG366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 (398) LYS439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI prot.sequence virkFtKknvaRakkkYtpfskrfksiaaipdltslpefygnsrfenklkttqkhqivetifskvkkqlnssylparenefasiylsaysaiesdsattiyvagtpgvgktltvrevvkellsssaqreipdflyveinglkmvkptdcyetlwnkvsgerltwaasmeslefyfkrvpknkkktivvlldeldamvtksqdimynffnwttyenakliviavantmdlperqlgnkitsrigftrimftgytheelkniidlrlkglndsffyvdtktgnailivrkvrlrmsadaieiasrkvasvsgdarralkvckraaeiaekhymakhgygydgvqtvhithvmkalnetlnshvitfmtrlsftaklfiyallnlmkkngsqeqelgdivdeikllievngsnkfvmeiaktlfqqgsdniseqlriiswdfvlnqlldagilfkqtmkndriccvklnisveeakramnedetlrnl/assfldtfegyfdqrkivRTnaksrhtmsmapdvtreefslvsnffnenfqkrprqklfeiqkkmfpqywfeltqgfsllfygvgskrnfleefaidylspkiaysqlsipclilngynpscnyrdvfkeitdllvpaeltrsetkyWgnhvilqiqkmidfyknqpldiklilvvhnldgpsirkntfqtmlsflsvirqiaivastdhiyapllwdnmkaqnynfvfhdisnfepstvestfqdvm/adaqrshytvypslphipFVkllsgkesevnvekrwelyhqlhshfhdqvdhiidnieadlkaeisdllysrcfntifllgsdsttkielkdessrynvlieltpkespnvrmmlrrsmyklysaadaeendvsydlslvenfkrlfGkdlamvfnfkdvdsinfntldnfiillksafkydhvkislifnintnlsnieknlrqstirllkrnyhkldvssnkgfkygnqifqsfldtvdgklnlsdrfvefilskmanntnhnlqlltkmldyslmsyffqnafsvfidpvnvdflnddylkilsrcptfmffveglikqhleeffveflvrenpinghakfvarfleeelnitnfnlielyhnlligkldsyldrwsackeykdrlhfepidtifqelftldnrsglltqsifpsyksniednllsweqvlpslsgdldkimapvlgqlfklyreanmtiniydfyiafretlpkeeilnfirkdpsntkllelaetpdafdkvalilfmqaifafenmglikfqstksydlvekcvwrgi/dpgfgslqrrllqqlygtlptdekiiftylqdcqqeidriikqsiiqkeshsvilvgprqsyktylldyelsllqqsykeqfitirlngfihseqtaingiatqleqqlqkihtissgsltevfekilllldtkitvvfifdeidtfagpvrqtllynlfdmvehsrvpvcifgcttklnileylekrvksrfsqrviympqiqnlddmvdavrnlltvrseispwvsqwnetlekelsdprsnlnrhirmnfetfrslptlknsiiplvatsknfgslctaikscsfldiynknqlsnnltgrlqslsdlelailisaarvalrakdgsfnfnlayaeyekmikainsrtiklwlkkdvknvwenlvqldffteksavglrdnataaFYasNYqfqgtmipfdlrsyqmqiilqelrriipksnmyyswtql/nvttpevafreyqtnclasyisadpditpsnlilqgysgtgktytlkkyfnanpnlhavwlepvelvswkpllqaiartvqyklktlypnipttdydplqveepfllvktlhnifvqyeslqektclflildgfdslqdldaalfnkyiklnellpkdskinikfiytmletsflqrysthciptvmfprynvdevstilvmsrcgelmedsclrkriieeddqfqnvaanfihlivqafhsytgndifalndlidfkwpkyvsritkenifeplalyksaiklflstddnllsiiskylliasyicsyleprydasifsrktriiqgRaaYgrRkkkevnprylqpslfaierllaifqaifpialreeslmkanievfqnlselhtlkliattmnKnidylspkvrwkvnvpweiikeisesvhfnisdyfsdih/siflrtkallqksselvdgalpartaeyeqvmnflakaisehrsdslyitgppgtgktaqldmiirqkflqnlswfelpdgrlesvavtsincislgepssifqkifdsfqdgptlqiknmqhlqkflepytfvvvldemdrllhantsetqsvrtilelfllaklptvsfvligmansldmlpqtivfqpytaeqmyeiviqkmsslptiifqpmaikfaakkcagntgdlrklfdvlrgsieiyelekkiglnyiakvfskfvstrtriaklniqqklilctiiqslklnsdatidesfdhyikaitktdtlaplqrnefleictiLetCglVsikktkckgktkrfvdkidvdldmrefydemtkisilkpfl >7tjk_F: title=S. CEREVISIAE ORC BOUND TO 84 BP ARS1 DNA AND CDC6 (STATE 2) WITH DOCKED ORC6 N-TERMINAL DOMAIN organism=? DNA sequence DT(G21) DA(G22) DC(G23) DA(G24) DG(G25) DA(G26) DT(G27) DT(G28) DT(G29) DT(G30) DA(G31) DT(G32) DG(G33) DT(G34) DT(G35) DT(G36) DA(G37) DG(G38) DA(G39) DT(G40) DC(G41) DT(G42) DT(G43) DT(G44) DT(G45) DA(G46) DT(G47) DG(G48) DC(G49) DT(G50) DT(G51) DG(G52) DC(G53) DT(G54) DT(G55) DT(G56) DT(G57) DC(G58) DA(G59) DA(G60) DA(G61) chainF (112) TYR277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence smqqvqhcvaevlrwssgylkkltnatsilyntslnkvmlkqdeevarchicayiasqkmnekhmpdlcyyidsiplepkkakhlmnlfrqslsnsspmkqfawtsllvkkYckmtteeiirlcndfelprevaykivdeyninasrlvcpwqlvcglvlnctfivfnerrrkdpridhfivskmcslmltskvddviecvklvkeliigekwfrdlqiryddfdgirydeiifrklgsmlqttnilvtddqyniwkkriem >7tn2_D:Histone-fold; title=COMPOSITE MODEL OF A CHD1-NUCLEOSOME COMPLEX IN THE NUCLEOTIDE-FREE STATE DERIVED FROM 2.3A AND 2.7A CRYO-EM MAPS organism=? DNA sequence DT(J-80):DA(I80) DA(J-79):DT(I79) DC(J-78):DG(I78) DA(J-77):DT(I77) DT(J-76):DA(I76) DG(J-75):DC(I75) DC(J-74):DG(I74) DA(J-73):DT(I73) DC(J-72):DG(I72) DA(J-71):DT(I71) DG(J-70):DC(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DC(J25):DG(I-25) DT(J26):DA(I-26) DA(J27):DT(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DC(J31):DG(I-31) DT(J32):DA(I-32) DG(J33):DC(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DT(J36):DA(I-36) DA(J37):DT(I-37) DC(J38):DG(I-38) DG(J39):DC(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DC(J42):DG(I-42) DA(J43):DT(I-43) DA(J44):DT(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DA(J48):DT(I-48) DG(J49):DC(I-49) DC(J50):DG(I-50) DG(J51):DC(I-51) DG(J52):DC(I-52) DC(J53):DG(I-53) DC(J54):DG(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DG(J57):DC(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DC(J61):DG(I-61) DC(J62):DG(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DT(J70):DA(I-70) DC(J71):DG(I-71) DC(J72):DG(I-72) DA(J73):DT(I-73) DG(J74):DC(I-74) DG(J75):DC(I-75) DG(J76):DC(I-76) DC(J77):DG(I-77) DG(J78):DC(I-78) DG(J79):DC(I-79) chainD ( 1) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RrktRkesyaiyvykvlkqvhpdtgisckamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7tqb_H:Immunoglobulin; title=CRYSTAL STRUCTURE OF MONOCLONAL S9.6 FAB BOUND TO DNA-RNA HYBRID organism=SYNTHETIC CONSTRUCT DNA sequence DC(B1) DG(B2) DT(B3) DG(B4) DT(B5) DC(B6) DA(B7) DG(B8) DA(B9) DC(B10) DA(B11) DA(B12) DG(B13) chainH ( 55) ASN55 0 0 0 4 1 0 0 0 0 0 0 0 0 (101) TYR101 0 0 0 0 0 0 4 4 0 0 0 0 0 prot.sequence evqlqqsgpelvkpgasvkmsckasgytftsyvmhwvkqkpgqglewigfinlyNdgtkynekfkgkatltsdkssstaymelssltskdsavyycardyYgsrwfdywgqgttltvssakttapsvyplapvsvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsdlytlsssvtvtsstwpsqsitcnvahpasstkvdkk >7tqq_F:Ribonuclease_H-like; title=STRUCTURE OF HUMAN TREX1-DNA COMPLEX organism=Homo sapiens DNA sequence DG(H1):DC(H22) DT(H2):DT(H21) DT(H3):DA(H20) DG(H4):DC(H19) DG(H5):DC(H18) DC(H6):DG(H17) DC(H7):DG(H16) DC(H8):DG(H15) chainF ( 18) LEU24 21 13 0 0 0 0 0 0 ( 19) PRO25 0 2 0 0 0 0 0 0 ( 20) PHE26 5 0 0 0 0 0 0 0 ( 67) SER78 9 0 0 0 0 0 0 0 ( 69) ALA80 8 0 0 0 0 0 0 0 ( 70) ALA81 2 0 0 0 0 0 0 0 ( 73) ILE84 5 0 0 0 0 0 0 0 (114) ASN125 0 3 0 0 0 0 0 0 (117) ARG128 0 0 2 3 0 0 0 0 (118) TYR129 0 6 0 0 0 0 0 0 prot.sequence ppgpmqtliffdmeatgLPFsqpkvtelcllavhrcalespptptvpppprvvdklslcvapgkacSpAAseItglstavlaahgrqcfddnlanlllaflrrqpqpwclvahNgdRYdfpllqaelamlgltsaldgafcvdsitalkalerasksyslgsiytrlygqsppdshtaegdvlallsicqwrpqallrwvdaharpfgtirpmyg >7tqw_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=KOD RSGA INCORPORATING PMT, N+2 organism=Thermococcus kodakarensis DNA sequence DC(P1):DG(T16) DG(P2):DC(T15) DC(P3):DG(T14) DG(P4):DC(T13) DA(P5):DT(T12) DA(P6):DT(T11) DC(P7):DG(T10) DT(P8):DA(T9) DG(P9):DC(T8) DC(P10):DG(T7) DG(P11):DC(T6) chainA (592) LYS592 0 0 0 0 0 0 0 0 0 0 7 (612) ARG612 0 0 0 0 0 0 0 0 7 7 0 prot.sequence mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafdietlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqrrikilassyygyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittggleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklviheqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdpakhkydaeyyienqvlpaverilrafgyrkedlr >7tr7_A:DNase_I-like; title=APE1 PRODUCT COMPLEX WITH ABASIC SSDNA organism=Homo sapiens DNA sequence DC(D2):DG(C3) DG(D3):DA(C4) DA(D4):DT(C5) DT(D5):DG(C6) DG(D6):DC(C7) chainA (135) ARG177 8 0 0 0 0 (180) ASN222 0 0 1 0 0 (187) ASN229 8 0 0 0 0 (228) MET270 3 4 0 0 0 prot.sequence alyedppdqktspsgkpatlkicswnvdglrawikkkgldwvkeeapdilclqetkcsenklpaelqelpglshqywsapsdkegysgvgllsrqaplkvsygigdeehdqegrvivaefdsfvlvtayvpnagRglvrleyrqrwdeafrkflkglasrkplvlcgdlnvaheeidlrNpkgNkkNagftpqerqgfgellqavpladsfrhlypntpyaytfwtyMmnarsknvgwrldyfllshsllpalcdskirskalgsdhcpitlylal >7tr9_CP: title=CASCADE COMPLEX FROM TYPE I-A CRISPR-CAS SYSTEM organism=? DNA sequence DG(S59):DC(T21) DG(S60):DC(T20) DG(S61):DC(T19) DT(S62):DA(T18) DC(S63):DG(T17) chainC ( 87) ASN96 0 7 3 0 0 ( 88) ASN97 8 2 0 0 0 ( 89) VAL98 0 0 2 0 0 (127) LYS136 0 5 14 11 0 (246) ASN255 19 0 0 0 0 (247) ASN256 1 0 0 0 0 (248) GLN257 7 1 0 0 0 chainP ( 95) ARG95 0 1 0 0 0 prot.sequence fnefktpqidpifdlyvaygyvvslirggakeatliphgasyliqtdvsneefrhglvdalssmlslhialaklvsdadfsaganiNNVywdsvprnleklmkdlekkrsvkgtatipitlmpsagKymlkhfgvqggnpikvdllnyalawvgfhyytpyikyakgdttwihiyqiapveevdmisilslkdlkmhlphyyesnldflinrrlallyhllhsealelftekefvihsytlersgNNQairsfeeeeigklmdflwklkrrdfyhaikfiddllkkategalalidaimnerlegfytalklgkkagvvssreivaalediic/mdillvclrfpffsvakrsyqvrtsfllpppsalkgalakglillkpekyasssldeaalkaikeiesklvdikavsvaplsplirnafllkrlRnlesgsnaeksdamrreytftrellvayifknltqeeknlylkaamlidvigdteslatpvwasfvkpedkkaplafsapyteiyslrmyiekmrvspeysqeeifylpieerrykrivyyariyppevekaltvdgevlgiwip >7tr9_DEIJKL: title=CASCADE COMPLEX FROM TYPE I-A CRISPR-CAS SYSTEM organism=? DNA sequence DG(S42) DG(S43) DG(S44) DT(S45) DT(S46) DG(S47) DG(S48) DG(S49) DG(S50) DG(S51) DA(S52) DA(S53) DG(S54) DC(S55) DA(S56) DC(S57) DT(S58) DG(S59) DG(S60) DG(S61) DT(S62) DC(S63) chainD ( 19) GLU21 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) TYR23 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainI ( 25) ASN25 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 27) ILE27 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (161) LYS161 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (164) ARG164 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (173) ILE173 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (182) GLN182 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 (183) MET183 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 (184) LEU184 0 0 0 0 0 0 0 0 0 0 11 12 0 0 0 0 0 0 0 0 0 0 (185) PHE185 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 chainJ ( 25) ASN25 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ILE27 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) GLN90 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 (124) LEU124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (126) PRO126 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 (164) ARG164 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ILE173 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) GLN182 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) MET183 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) LEU184 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) PHE185 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 25) ASN25 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ILE27 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) GLN90 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) LEU124 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) PRO126 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ARG164 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) PHE185 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 90) GLN90 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) LEU124 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) PRO126 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gwirnigrylsylvddtfEeYaydvvdgiakartqeellegvykalrlapklkkkaeskgcpppripspediealeekveqlsnpkdlrklavslalwafaswnncp/ggwirnigrylsylvddtFeEyaydvvdgiakartqeellegvykalrlapklkkkaeskgcpppripspediealeekveqlsnpkdlrklavslalwafaswnncp/myvrisgrirlnahslnaqggggtNyIeitktkvtvrtengwtvvevpaitgnmlkhwhfvgfvdyfkttpygvnlteralryngtrfgqgettatkangatvqlndeatiikeladadvhgflapktgrrrvslvkasfilptedfikevegerlitaiKhnRvdvdekgaIgsskegtaQMLFsreyatglygfsivldlglvgipqglpvkfeenqprpnividpnerkariesalkalipmlsgyiganlarsfpvfkveelvaiasegpipalvhgfyedyieanrsiiknaralgfnievftynvdlgedieatkvssveelvanlvkm/myvrisgrirlnahslnaqggggtNyIeitktkvtvrtengwtvvevpaitgnmlkhwhfvgfvdyfkttpygvnlteralryngtrfgQgettatkangatvqlndeatiikeladadvhgfLaPktgrrrvslvkasfilptedfikevegerlitaikhnRvdvdekgaIgsskegtaQMLFsreyatglygfsivldlglvgipqglpvkfeenqprpnividpnerkariesalkalipmlsgyiganlarsfpvfkveelvaiasegpipalvhgfyedyieanrsiiknaralgfnievftynvdlgedieatkvssveelvanlvkmv/myvrisgrirlnahslnaqggggtNyIeitktkvtvrtengwtvvevpaitgnmlkhwhfvgfvdyfkttpygvnlteralryngtrfgQgettatkangatvqlndeatiikeladadvhgfLaPktgrrrvslvkasfilptedfikevegerlitaikhnRvdvdekgaigsskegtaqmlFsreyatglygfsivldlglvgipqglpvkfeenqprpnividpnerkariesalkalipmlsgyiganlarsfpvfkveelvaiasegpipalvhgfyedyieanrsiiknaralgfnievftynvdlgedieatkvssveelvanlvkmv/myvrisgrirlnahslnaqggggtnyieitktkvtvrtengwtvvevpaitgnmlkhwhfvgfvdyfkttpygvnlteralryngtrfgQgettatkangatvqlndeatiikeladadvhgfLaPktgrrrvslvkasfilptedfikevegerlitaikhnrvdvdekgaigsskegtaqmlfsreyatglygfsivldlglvgipqglpvkfeenqprpnividpnerkariesalkalipmlsgyiganlarsfpvfkveelvaiasegpipalvhgfyedyieanrsiiknaralgfnievftynvdlgedieatkvssveelvanlvkmv >7tr9_I: title=CASCADE COMPLEX FROM TYPE I-A CRISPR-CAS SYSTEM organism=? DNA sequence DG(S42) DG(S43) DG(S44) DT(S45) DT(S46) DG(S47) DG(S48) DG(S49) DG(S50) DG(S51) DA(S52) DA(S53) DG(S54) DC(S55) DA(S56) DC(S57) DT(S58) DG(S59) DG(S60) DG(S61) DT(S62) DC(S63) chainI ( 25) ASN25 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 27) ILE27 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (161) LYS161 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (164) ARG164 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (173) ILE173 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (182) GLN182 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 (183) MET183 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 (184) LEU184 0 0 0 0 0 0 0 0 0 0 11 12 0 0 0 0 0 0 0 0 0 0 (185) PHE185 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 prot.sequence myvrisgrirlnahslnaqggggtNyIeitktkvtvrtengwtvvevpaitgnmlkhwhfvgfvdyfkttpygvnlteralryngtrfgqgettatkangatvqlndeatiikeladadvhgflapktgrrrvslvkasfilptedfikevegerlitaiKhnRvdvdekgaIgsskegtaQMLFsreyatglygfsivldlglvgipqglpvkfeenqprpnividpnerkariesalkalipmlsgyiganlarsfpvfkveelvaiasegpipalvhgfyedyieanrsiiknaralgfnievftynvdlgedieatkvssveelvanlvkm >7tra_AQ: title=CASCADE COMPLEX FROM TYPE I-A CRISPR-CAS SYSTEM organism=? DNA sequence DA(T44) DA(T43) DA(T42) DA(T40) DA(T39) DA(T38) DA(T37) DA(T34) DA(T33) DA(T32) DA(T31) DA(T30) DA(T29) DA(T28) DT(T25) DT(T24) DA(T16) DG(T17) DA(T18) DC(T19) DC(T20) DC(T21) DA(T22) DG(T23):DT(T24) chainA ( 67) ARG75 0 0 0 0 0 0 0 2 27 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) VAL113 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) GLU114 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) LYS119 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ASP133 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) ALA140 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) ALA141 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) HIS142 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) THR144 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ASN147 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) PHE151 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) PRO152 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) ALA153 0 0 0 3 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) GLN317 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (427) LEU435 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) LYS437 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (430) ASP438 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 (432) TYR441 0 0 0 0 0 0 0 0 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) LYS485 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (478) HIS487 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (480) GLU489 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 79) ARG80 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) PRO119 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ILE120 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) GLN124 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) LEU128 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ASP140 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) ARG143 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) TYR213 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eltgfepydyqlrawekireimnnggkviievptaggktetavmpffagiynnnwpvarlvyvlptRslvekqaerlrnlvykllqlkgkskeeaeklarelvvVEygleKthaflgwvvvttwDaflyglAAHrTvgNrFTFPAgaiaqslvifdevqmyqdesmymprllslvvgileeanvplvimsatipsklremiagdtevitvdkndknkpskgnvkvrlvegditdvlndikkilkngkkvlvvrntvrkavetyqvlkkklndtlanpsdallihsrftigdrrekeraldsarlivatQvveagldlpnvglvvtdiapldaliqrigrcarrpgeegegiilipaaaaaaaaaaaaaaaaaaaaaaaaaaaavvtstneydrvveihygegkknfvyvgdidtarrvlekkrskkLpKDlYiipysvspypdplvllttydelskigeyladttkarkaldrvyKfHyEnnivpkefasyiyfkelklfsappeyekaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaidakyynselaaaaaaaaaaaaaaaaaaa/sckafqgqtlrehieamlaaweivknkyipsiirvmktvgvkfteedadkfmktliilhdvgkcsevyqkhlsnneplRgfrhelvsayyaynilkdmfkdetiafigalvvmmhhePIlmgQirsLdkeeltpevvlDklRtfngvmegtesfiksmikeklgvipkvpsptqedvlrevirlsvlarhrpdsgklrmvvgalliplvcdYkgaaaaa >7tra_BO: title=CASCADE COMPLEX FROM TYPE I-A CRISPR-CAS SYSTEM organism=? DNA sequence DG(S59):DC(T21) DG(S60):DC(T20) DG(S61):DC(T19) DT(S62):DA(T18) DC(S63):DG(T17) DT(S64):DA(T16) chainB ( 87) ASN96 0 2 0 0 0 0 ( 88) ASN97 13 8 0 0 0 0 ( 89) VAL98 0 4 2 0 0 0 (127) LYS136 0 6 10 2 0 0 (246) ASN255 23 0 0 0 0 0 (247) ASN256 8 0 0 0 0 0 (248) GLN257 3 0 0 0 0 0 chainO prot.sequence fnefktpqidpifdlyvaygyvvslirggakeatliphgasyliqtdvsneefrhglvdalssmlslhialaklvsdadfsaganiNNVywdsvprnleklmkdlekkrsvkgtatipitlmpsagKymlkhfgvqggnpikvdllnyalawvgfhyytpyikyakgdttwihiyqiapveevdmisilslkdlkmhlphyyesnldflinrrlallyhllhsealelftekefvihsytlersgNNQairsfeeeeigklmdflwklkrrdfyhaikfiddllkkategalalidaimnerlegfytalklgkkagvvssreivaalediic/mdillvclrfpffsvakrsyqvrtsfllpppsalkgalakglillkpekyasssldeaalkaikeiesklvdikavsvaplsplirNAFllkrlrnlesgsnaeksdamrreytftrellvayifkNltqeeknlylkaamlidvigdteslatpvwasfvkpedkkaplafsapyteiyslrmyiekmrvspeysqeeifylpieerrykrivyyariyppevekaltvdgevlgiwip >7tra_J: title=CASCADE COMPLEX FROM TYPE I-A CRISPR-CAS SYSTEM organism=? DNA sequence DT(S21) DA(S22) DA(S23) DA(S24) DC(S25) DT(S26) DG(S27) DT(S28) DT(S29) DA(S30) DC(S31) DA(S32) DA(S33) DC(S34) DC(S35) DA(S36) DG(S37) DT(S38) DT(S39) DA(S40) DA(S41) DG(S42) DG(S43) DG(S44) DT(S45) DT(S46) DG(S47) DG(S48) DG(S49) DG(S50) DG(S51) DA(S52) DA(S53) DG(S54) DC(S55) DA(S56) DC(S57) DT(S58) DG(S59) DG(S60) DG(S61) DT(S62) DC(S63) DT(S64) chainJ ( 25) ASN25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ILE27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) LEU124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) PRO126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ASN163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ARG164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ILE173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) GLN182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) MET183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) LEU184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) PHE185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence myvrisgrirlnahslnaqggggtNyIeitktkvtvrtengwtvvevpaitgnmlkhwhfvgfvdyfkttpygvnlteralryngtrfgqgettatkangatvqlndeatiikeladadvhgfLaPktgrrrvslvkasfilptedfikevegerlitaikhNRvdvdekgaIgsskegtaQMLFsreyatglygfsivldlglvgipqglpvkfeenqprpnividpnerkariesalkalipmlsgyiganlarsfpvfkveelvaiasegpipalvhgfyedyieanrsiiknaralgfnievftynvdlgedieatkvssveelvanlvkmv >7trd_A:DNA/RNA_polymerases; title=HUMAN TELOMERASE CATALYTIC CORE STRUCTURE AT 3.3 ANGSTROM organism=HOMO SAPIENS DNA sequence DT(N12) DT(N13) DT(N14) DA(N15) DG(N16) DG(N17) DG(N18) chainA (168) LYS329 0 2 0 0 0 0 0 (312) HIS500 0 11 0 0 0 0 0 (519) TYR717 0 0 0 0 0 0 1 (641) THR839 0 0 0 0 0 0 1 (668) LEU866 0 0 0 0 0 1 0 (669) VAL867 0 0 0 0 0 0 1 (779) VAL977 0 0 1 0 0 0 0 (782) LEU980 0 0 11 8 0 0 0 prot.sequence cravrsllrshyrevlplatfvrrlgpqgwrlvqrgdpaafralvaqclvcvpwdarpppaapsfrqvsclkelvarvlqrlcergaknvlafgfalltsvrsylpntvtdalrgsgawglllrrvgddvlvhllarcalfvlvapscayqvcgpplyqlppvyaetKhflyssgdkeqlrpsfllsslrpsltgarrlvetiflgsrpwmpgtprrlprlpqrywqmrplflellgnhaqcpygvllkthcplrdprrlvqllrqhsspwqvygfvraclrrlvppglwgsrhnerrflrntkkfislgkHaklslqeltwkmsvrdcawlrrspgvgcvpaaehrlreeilakflhwlmsvyvvellrsffyvtettfqknrlffyrksvwsklqsigirqhlkrvqlrelseaevrqhrearpalltsrlrfipkpdglrpivnmdyvvaerltsrvkalfsvlnyerarrpgllgasvlglddihrawrtfvlrvraqdpppelyfvkvdvtgaYdtipqdrlteviasiikpqntycvrryavvqkaahghvrkafkshvstltdlqpymrqfvahlqetsplrdavvieqssslneassglfdvflrfmchhavrirgksyvqcqgipqgsilsTllcslcygdmenklfagirrdglllrLVddfllvtphlthaktflrtlvrgvpeygcvvnlrktvvnfpvedealggtafvqmpahglfpwcgllldtrtlevqsdyssyartsirasltfnrgfkagrnmrrklfgVlrLkchslfldlqvnslqtvctniykilllqayrfhacvlqlpfhqqvwknptfflrvisdtaslcysilkaknagmslgakgaagplpseavqwlchqafllkltrhrvtyvpllgslrtaqtqlsrklpgttltaleaaanpalpsdfktild >7tre_A:DNA/RNA_polymerases; title=HUMAN TELOMERASE CATALYTIC CORE WITH SHELTERIN PROTEIN TPP1 organism=HOMO SAPIENS DNA sequence DT(D12) DT(D13) DT(D14) DA(D15) DG(D16) DG(D17) DG(D18) chainA (168) LYS329 0 1 0 0 0 0 0 (312) HIS500 0 17 0 0 0 0 0 (641) THR839 0 0 0 0 0 0 1 (668) LEU866 0 0 0 0 0 1 0 (779) VAL977 0 0 1 0 0 0 0 (782) LEU980 0 0 17 9 0 0 0 prot.sequence cravrsllrshyrevlplatfvrrlgpqgwrlvqrgdpaafralvaqclvcvpwdarpppaapsfrqvsclkelvarvlqrlcergaknvlafgfalltsvrsylpntvtdalrgsgawglllrrvgddvlvhllarcalfvlvapscayqvcgpplyqlppvyaetKhflyssgdkeqlrpsfllsslrpsltgarrlvetiflgsrpwmpgtprrlprlpqrywqmrplflellgnhaqcpygvllkthcplrdprrlvqllrqhsspwqvygfvraclrrlvppglwgsrhnerrflrntkkfislgkHaklslqeltwkmsvrdcawlrrspgvgcvpaaehrlreeilakflhwlmsvyvvellrsffyvtettfqknrlffyrksvwsklqsigirqhlkrvqlrelseaevrqhrearpalltsrlrfipkpdglrpivnmdyvvaerltsrvkalfsvlnyerarrpgllgasvlglddihrawrtfvlrvraqdpppelyfvkvdvtgaydtipqdrlteviasiikpqntycvrryavvqkaahghvrkafkshvstltdlqpymrqfvahlqetsplrdavvieqssslneassglfdvflrfmchhavrirgksyvqcqgipqgsilsTllcslcygdmenklfagirrdglllrLvddfllvtphlthaktflrtlvrgvpeygcvvnlrktvvnfpvedealggtafvqmpahglfpwcgllldtrtlevqsdyssyartsirasltfnrgfkagrnmrrklfgVlrLkchslfldlqvnslqtvctniykilllqayrfhacvlqlpfhqqvwknptfflrvisdtaslcysilkaknagmslgakgaagplpseavqwlchqafllkltrhrvtyvpllgslrtaqtqlsrklpgttltaleaaanpalpsdfktild >7trf_A:DNA/RNA_polymerases; title=HUMAN TELOMERASE CATALYTIC CORE RNP WITH H2A/H2B organism=HOMO SAPIENS DNA sequence DT(D12) DT(D13) DT(D14) DA(D15) DG(D16) DG(D17) DG(D18) chainA (168) LYS329 0 2 0 0 0 0 0 (312) HIS500 0 11 0 0 0 0 0 (519) TYR717 0 0 0 0 0 0 1 (641) THR839 0 0 0 0 0 0 1 (668) LEU866 0 0 0 0 0 1 0 (669) VAL867 0 0 0 0 0 0 1 (779) VAL977 0 0 1 0 0 0 0 (782) LEU980 0 0 11 8 0 0 0 prot.sequence cravrsllrshyrevlplatfvrrlgpqgwrlvqrgdpaafralvaqclvcvpwdarpppaapsfrqvsclkelvarvlqrlcergaknvlafgfalltsvrsylpntvtdalrgsgawglllrrvgddvlvhllarcalfvlvapscayqvcgpplyqlppvyaetKhflyssgdkeqlrpsfllsslrpsltgarrlvetiflgsrpwmpgtprrlprlpqrywqmrplflellgnhaqcpygvllkthcplrdprrlvqllrqhsspwqvygfvraclrrlvppglwgsrhnerrflrntkkfislgkHaklslqeltwkmsvrdcawlrrspgvgcvpaaehrlreeilakflhwlmsvyvvellrsffyvtettfqknrlffyrksvwsklqsigirqhlkrvqlrelseaevrqhrearpalltsrlrfipkpdglrpivnmdyvvaerltsrvkalfsvlnyerarrpgllgasvlglddihrawrtfvlrvraqdpppelyfvkvdvtgaYdtipqdrlteviasiikpqntycvrryavvqkaahghvrkafkshvstltdlqpymrqfvahlqetsplrdavvieqssslneassglfdvflrfmchhavrirgksyvqcqgipqgsilsTllcslcygdmenklfagirrdglllrLVddfllvtphlthaktflrtlvrgvpeygcvvnlrktvvnfpvedealggtafvqmpahglfpwcgllldtrtlevqsdyssyartsirasltfnrgfkagrnmrrklfgVlrLkchslfldlqvnslqtvctniykilllqayrfhacvlqlpfhqqvwknptfflrvisdtaslcysilkaknagmslgakgaagplpseavqwlchqafllkltrhrvtyvpllgslrtaqtqlsrklpgttltaleaaanpalpsdfktild >7tve_DF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=ATP AND DNA BOUND SMC5/6 CORE COMPLEX organism=SACCHAROMYCES CEREVISIAE W303 DNA sequence DA(A1):DT(B27) DA(A3):DT(B26) DA(A4):DT(B25) DA(A6):DT(B23) DA(A7):DT(B22) DA(A8):DT(B21) DA(A9):DT(B20) DA(A10):DT(B19) DA(A11):DT(B18) DA(A13):DT(B16) DA(A14):DT(B15) DA(A15):DT(B14) DA(A16):DT(B13) DA(A17):DT(B12) DA(A18):DT(B11) DA(A19):DT(B9) DA(A21):DT(B8) DA(A22):DT(B7) DA(A23):DT(B6) DA(A24):DT(B5) DA(A25):DT(B4) DA(A26):DT(B3) DA(A27):DT(B2) chainD chainF ( 38) ASN49 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 prot.sequence eespsgyikkvilrnfmchehfelelgsrlnfivgnngsgksailtaitiglgakasetnrgsslkdliregcysakiilhldnskygayqqgifgneiiveriikrdgpasfslrsengkeisnkkkdiqtvvdyfsvpvsnpmcflsqdaarsfltastsqdkyshfmkgtllqeitenllyasaihdsaqenmalhlenlkslkaeyedakkllrelnqtsdlnerkmllqaksldtqeeikreldkvsrmiqkaekslglsqeevialfekcrnkykegqkkymeidealnrlhnslkardqnyknaekgtcfdadmdfraslkvrkfsgnlsfikdtksleiyilttndekarnvdtlsggeksfsqmalllatwkpmrsriialdqfdvfmdqvnrkigttlivkklkdiartqtiiitpqdigkiadidssgvsihrm/ltedlavakivkenpvarkmvryilsrgesqnsiitrNklqsviheaareeniakpsfskmfmdinailynvygfelqglpskghraqkfillnnvphsknfddfkilqsahtyeelivtgeyigddiasgtsntlesklstdrdlvykgvlsvilcivffsknnilhqelikfletfgipsdgskiailnitiedlikslekreyivrleeksdtdgevisyrigrrtqaelglesleklvqeimglekeqtkslhddiiksigdsysi >7tve_F: title=ATP AND DNA BOUND SMC5/6 CORE COMPLEX organism=SACCHAROMYCES CEREVISIAE W303 DNA sequence DT(B2):DA(A27) DT(B3):DA(A26) DT(B4):DA(A25) DT(B5):DA(A24) DT(B6):DA(A23) DT(B7):DA(A22) DT(B8):DA(A21) DT(B9):DA(A19) DT(B11):DA(A18) DT(B12):DA(A17) DT(B13):DA(A16) DT(B14):DA(A15) DT(B15):DA(A14) DT(B16):DA(A13) DT(B18):DA(A11) DT(B19):DA(A10) DT(B20):DA(A9) DT(B21):DA(A8) DT(B22):DA(A7) DT(B23):DA(A6) DT(B25):DA(A4) DT(B26):DA(A3) DT(B27):DA(A1) chainF ( 38) ASN49 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ltedlavakivkenpvarkmvryilsrgesqnsiitrNklqsviheaareeniakpsfskmfmdinailynvygfelqglpskghraqkfillnnvphsknfddfkilqsahtyeelivtgeyigddiasgtsntlesklstdrdlvykgvlsvilcivffsknnilhqelikfletfgipsdgskiailnitiedlikslekreyivrleeksdtdgevisyrigrrtqaelglesleklvqeimglekeqtkslhddiiksigdsysi >7txc_E:beta-beta-alpha_zinc_fingers; title=HIC2 ZINC FINGER DOMAIN IN COMPLEX WITH THE DNA BINDING MOTIF-2 OF THE BCL11A ENHANCER organism=Homo sapiens DNA sequence DA(B21):DT(A16) DC(B22):DG(A15) DT(B23):DA(A14) DG(B24):DC(A13) DT(B25):DA(A12) DT(B26):DA(A11) DG(B27):DC(A10) DG(B28):DC(A9) DC(B29):DG(A8) DA(B30):DT(A7) DT(B31):DA(A6) DT(B32):DA(A5) DA(B33):DT(A4) DT(B34):DA(A3) DC(B35):DG(A2) DT(B36):DA(A1) chainE ( 43) GLN544 0 0 0 0 0 0 0 0 11 11 1 0 0 0 0 0 ( 46) THR547 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 ( 49) ARG550 0 0 0 0 0 0 9 11 10 0 0 0 0 0 0 0 ( 71) ARG572 0 0 0 0 0 13 14 2 0 0 0 0 0 0 0 0 ( 73) TYR574 0 0 0 0 0 1 3 9 4 0 0 0 0 0 0 0 ( 74) ARG575 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence srpfkcsvcektykdpatlrqhekthwltrpfpcnicgkmftQrgTmtRhmrshlglkpfacdecgmrftRqYRltehmrvhsg >7tz1_A:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYSTAL STRUCTURE OF A MYCOBACTERIOPHAGE CLUSTER A2 IMMUNITY REPRESSOR:DNA COMPLEX organism=Mycobacterium phage TipsytheTRex DNA sequence DT(B22):DA(C80) DT(B23):DA(C79) DT(B24):DA(C78) DC(B25):DG(C77) DG(B26):DC(C76) DG(B27):DC(C75) DT(B28):DA(C74) DG(B29):DC(C73) DG(B30):DC(C72) DC(B31):DG(C71) DT(B32):DA(C70) DG(B33):DC(C69) DT(B34):DA(C68) DC(B35):DG(C67) DA(B36):DT(C66) DA(B37):DT(C65) DG(B38):DC(C64) DC(B39):DG(C63) DG(B40):DC(C62) DG(B41):DC(C61) DG(B42):DC(C60) chainA ( 30) THR44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 ( 31) ARG45 0 0 0 0 0 0 0 0 0 0 2 14 3 0 0 0 0 0 0 0 0 ( 32) GLN46 0 0 0 0 0 0 0 0 0 0 0 0 8 12 13 2 0 0 0 0 0 ( 33) ALA47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 35) SER49 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 ( 36) TRP50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 ( 61) LYS75 0 0 0 0 0 0 0 0 2 9 4 0 0 0 0 0 0 0 0 0 0 ( 64) ASP78 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS79 0 0 0 0 0 0 2 10 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS81 0 0 0 0 8 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) GLN84 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG108 0 0 0 15 14 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sripltlseiedlrrkgfnqteiaelygvTRQAvSWhkktyggrlttrqivqqnwpwdtrKphDKsKafQrlrdhgeymrvgsfrtmsedkkkRllswwkmlrdndlvlefdpsiepyegmagggfryvprdisdddllirvnehtqltaegellwswpddieells >7u0g_M:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF LIN28B NUCLEOSOME BOUND 3 OCT4 organism=? DNA sequence DC(J4):DG(I159) DT(J5):DA(I158) DT(J6):DA(I157) DT(J7):DA(I156) DA(J8):DT(I155) DT(J9):DA(I154) DT(J10):DA(I153) DC(J11):DG(I152) DA(J12):DT(I151) DC(J13):DG(I150) DA(J14):DT(I149) DA(J15):DT(I148) DG(J16):DC(I147) DC(J17):DG(I146) DT(J18):DA(I145) DT(J19):DA(I144) DG(J20):DC(I143) DC(J21):DG(I142) DA(J22):DT(I141) DC(J23):DG(I140) DA(J24):DT(I139) DA(J25):DT(I138) DT(J26):DA(I137) DC(J27):DG(I136) DC(J28):DG(I135) DC(J29):DG(I134) DT(J30):DA(I133) DG(J31):DC(I132) DC(J32):DG(I131) DT(J33):DA(I130) DG(J34):DC(I129) DG(J35):DC(I128) DA(J36):DT(I127) DC(J37):DG(I126) DA(J38):DT(I125) DA(J39):DT(I124) DT(J40):DA(I123) DT(J41):DA(I122) DC(J42):DG(I121) DT(J43):DA(I120) DG(J44):DC(I119) DA(J45):DT(I118) DG(J46):DC(I117) DT(J47):DA(I116) DG(J48):DC(I115) DA(J49):DT(I114) DT(J50):DA(I113) DG(J51):DC(I112) DG(J52):DC(I111) DC(J53):DG(I110) DA(J54):DT(I109) DG(J55):DC(I108) DC(J56):DG(I107) DT(J57):DA(I106) DC(J58):DG(I105) DC(J59):DG(I104) DC(J60):DG(I103) DA(J61):DT(I102) DC(J62):DG(I101) DC(J63):DG(I100) DT(J64):DA(I99) DT(J65):DA(I98) DT(J66):DA(I97) DC(J67):DG(I96) DC(J68):DG(I95) DT(J69):DA(I94) DT(J70):DA(I93) DC(J71):DG(I92) DT(J72):DA(I91) DT(J73):DA(I90) DC(J74):DG(I89) DC(J75):DG(I88) DT(J76):DA(I87) DT(J77):DA(I86) DC(J78):DG(I85) DA(J79):DT(I84) DC(J80):DG(I83) DT(J81):DA(I82) DT(J82):DA(I81) DA(J83):DT(I80) DG(J84):DC(I79) DA(J85):DT(I78) DC(J86):DG(I77) DT(J87):DA(I76) DA(J88):DT(I75) DC(J89):DG(I74) DA(J90):DT(I73) DT(J91):DA(I72) DT(J92):DA(I71) DT(J93):DA(I70) DA(J94):DT(I69) DT(J95):DA(I68) DT(J96):DA(I67) DC(J97):DG(I66) DA(J98):DT(I65) DG(J99):DC(I64) DC(J100):DG(I63) DA(J101):DT(I62) DT(J102):DA(I61) DC(J103):DG(I60) DT(J104):DA(I59) DG(J105):DC(I58) DT(J106):DA(I57) DA(J107):DT(I56) DT(J108):DA(I55) DT(J109):DA(I54) DG(J110):DC(I53) DT(J111):DA(I52) DT(J112):DA(I51) DG(J113):DC(I50) DG(J114):DC(I49) DA(J115):DT(I48) DG(J116):DC(I47) DT(J117):DA(I46) DA(J118):DT(I45) DA(J119):DT(I44) DG(J120):DC(I43) DT(J121):DA(I42) DT(J122):DA(I41) DC(J123):DG(I40) DC(J124):DG(I39) DA(J125):DT(I38) DT(J126):DA(I37) DG(J127):DC(I36) DT(J128):DA(I35) DT(J129):DA(I34) DA(J130):DT(I33) DA(J131):DT(I32) DT(J132):DA(I31) DA(J133):DT(I30) DC(J134):DG(I29) DT(J135):DA(I28) DC(J136):DG(I27) chainM ( 25) GLN164 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) SER180 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN181 0 0 0 0 17 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR182 0 0 0 0 0 0 5 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR183 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) CYS185 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG186 0 0 0 0 0 0 0 4 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kalqkeleqfakllkqkritlgytQadvgltlgvlfgkvfSQTTiCRfealqlsfknmcklrpllqkwveeadnn >7u0i_L:lambda_repressor-like_DNA-binding_domains; title=STRUCTURE OF LIN28B NUCLEOSOME BOUND 2 OCT4 organism=? DNA sequence DA(I11):DT(J152) DC(I12):DG(J151) DA(I13):DT(J150) DT(I14):DA(J149) DA(I15):DT(J148) DT(I16):DA(J147) DC(I17):DG(J146) DC(I18):DG(J145) DT(I19):DA(J144) DC(I20):DG(J143) DA(I21):DT(J142) DG(I22):DC(J141) DT(I23):DA(J140) DG(I24):DC(J139) DG(I25):DC(J138) DT(I26):DA(J137) DG(I27):DC(J136) DA(I28):DT(J135) DG(I29):DC(J134) DT(I30):DA(J133) DA(I31):DT(J132) DT(I32):DA(J131) DT(I33):DA(J130) DA(I34):DT(J129) DA(I35):DT(J128) DC(I36):DG(J127) DA(I37):DT(J126) DT(I38):DA(J125) DG(I39):DC(J124) DG(I40):DC(J123) DA(I41):DT(J122) DA(I42):DT(J121) DC(I43):DG(J120) DT(I44):DA(J119) DT(I45):DA(J118) DA(I46):DT(J117) DC(I47):DG(J116) DT(I48):DA(J115) DC(I49):DG(J114) DC(I50):DG(J113) DA(I51):DT(J112) DA(I52):DT(J111) DC(I53):DG(J110) DA(I54):DT(J109) DA(I55):DT(J108) DT(I56):DA(J107) DA(I57):DT(J106) DC(I58):DG(J105) DA(I59):DT(J104) DG(I60):DC(J103) DA(I61):DT(J102) DT(I62):DA(J101) DG(I63):DC(J100) DC(I64):DG(J99) DT(I65):DA(J98) DG(I66):DC(J97) DA(I67):DT(J96) DA(I68):DT(J95) DT(I69):DA(J94) DA(I70):DT(J93) DA(I71):DT(J92) DA(I72):DT(J91) DT(I73):DA(J90) DG(I74):DC(J89) DT(I75):DA(J88) DA(I76):DT(J87) DG(I77):DC(J86) DT(I78):DA(J85) DC(I79):DG(J84) DT(I80):DA(J83) DA(I81):DT(J82) DA(I82):DT(J81) DG(I83):DC(J80) DT(I84):DA(J79) DG(I85):DC(J78) DA(I86):DT(J77) DA(I87):DT(J76) DG(I88):DC(J75) DG(I89):DC(J74) DA(I90):DT(J73) DA(I91):DT(J72) DG(I92):DC(J71) DA(I93):DT(J70) DA(I94):DT(J69) DG(I95):DC(J68) DG(I96):DC(J67) DA(I97):DT(J66) DA(I98):DT(J65) DA(I99):DT(J64) DG(I100):DC(J63) DG(I101):DC(J62) DT(I102):DA(J61) DG(I103):DC(J60) DG(I104):DC(J59) DG(I105):DC(J58) DA(I106):DT(J57) DG(I107):DC(J56) DC(I108):DG(J55) DT(I109):DA(J54) DG(I110):DC(J53) DC(I111):DG(J52) DC(I112):DG(J51) DA(I113):DT(J50) DT(I114):DA(J49) DC(I115):DG(J48) DA(I116):DT(J47) DC(I117):DG(J46) DT(I118):DA(J45) DC(I119):DG(J44) DA(I120):DT(J43) DG(I121):DC(J42) DA(I122):DT(J41) DA(I123):DT(J40) DT(I124):DA(J39) DT(I125):DA(J38) DG(I126):DC(J37) DT(I127):DA(J36) DC(I128):DG(J35) DC(I129):DG(J34) DA(I130):DT(J33) DG(I131):DC(J32) DC(I132):DG(J31) DA(I133):DT(J30) DG(I134):DC(J29) DG(I135):DC(J28) DG(I136):DC(J27) DA(I137):DT(J26) DT(I138):DA(J25) DT(I139):DA(J24) DG(I140):DC(J23) DT(I141):DA(J22) DG(I142):DC(J21) DC(I143):DG(J20) DA(I144):DT(J19) DA(I145):DT(J18) DG(I146):DC(J17) DC(I147):DG(J16) DT(I148):DA(J15) DT(I149):DA(J14) DG(I150):DC(J13) DT(I151):DA(J12) DG(I152):DC(J11) DA(I153):DT(J10) DA(I154):DT(J9) DT(I155):DA(J8) DA(I156):DT(J7) DA(I157):DT(J6) DA(I158):DT(J5) DG(I159):DC(J4) chainL ( 42) GLN181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) CYS185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kalqkeleqfakllkqkritlgytqadvgltlgvlfgkvfsQTtiCRfealqlsfknmcklrpllqkwveeadnn >7u0j_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF 162BP LIN28B NUCLEOSOME organism=? DNA sequence DA(I11):DT(J152) DC(I12):DG(J151) DA(I13):DT(J150) DT(I14):DA(J149) DA(I15):DT(J148) DT(I16):DA(J147) DC(I17):DG(J146) DC(I18):DG(J145) DT(I19):DA(J144) DC(I20):DG(J143) DA(I21):DT(J142) DG(I22):DC(J141) DT(I23):DA(J140) DG(I24):DC(J139) DG(I25):DC(J138) DT(I26):DA(J137) DG(I27):DC(J136) DA(I28):DT(J135) DG(I29):DC(J134) DT(I30):DA(J133) DA(I31):DT(J132) DT(I32):DA(J131) DT(I33):DA(J130) DA(I34):DT(J129) DA(I35):DT(J128) DC(I36):DG(J127) DA(I37):DT(J126) DT(I38):DA(J125) DG(I39):DC(J124) DG(I40):DC(J123) DA(I41):DT(J122) DA(I42):DT(J121) DC(I43):DG(J120) DT(I44):DA(J119) DT(I45):DA(J118) DA(I46):DT(J117) DC(I47):DG(J116) DT(I48):DA(J115) DC(I49):DG(J114) DC(I50):DG(J113) DA(I51):DT(J112) DA(I52):DT(J111) DC(I53):DG(J110) DA(I54):DT(J109) DA(I55):DT(J108) DT(I56):DA(J107) DA(I57):DT(J106) DC(I58):DG(J105) DA(I59):DT(J104) DG(I60):DC(J103) DA(I61):DT(J102) DT(I62):DA(J101) DG(I63):DC(J100) DC(I64):DG(J99) DT(I65):DA(J98) DG(I66):DC(J97) DA(I67):DT(J96) DA(I68):DT(J95) DT(I69):DA(J94) DA(I70):DT(J93) DA(I71):DT(J92) DA(I72):DT(J91) DT(I73):DA(J90) DG(I74):DC(J89) DT(I75):DA(J88) DA(I76):DT(J87) DG(I77):DC(J86) DT(I78):DA(J85) DC(I79):DG(J84) DT(I80):DA(J83) DA(I81):DT(J82) DA(I82):DT(J81) DG(I83):DC(J80) DT(I84):DA(J79) DG(I85):DC(J78) DA(I86):DT(J77) DA(I87):DT(J76) DG(I88):DC(J75) DG(I89):DC(J74) DA(I90):DT(J73) DA(I91):DT(J72) DG(I92):DC(J71) DA(I93):DT(J70) DA(I94):DT(J69) DG(I95):DC(J68) DG(I96):DC(J67) DA(I97):DT(J66) DA(I98):DT(J65) DA(I99):DT(J64) DG(I100):DC(J63) DG(I101):DC(J62) DT(I102):DA(J61) DG(I103):DC(J60) DG(I104):DC(J59) DG(I105):DC(J58) DA(I106):DT(J57) DG(I107):DC(J56) DC(I108):DG(J55) DT(I109):DA(J54) DG(I110):DC(J53) DC(I111):DG(J52) DC(I112):DG(J51) DA(I113):DT(J50) DT(I114):DA(J49) DC(I115):DG(J48) DA(I116):DT(J47) DC(I117):DG(J46) DT(I118):DA(J45) DC(I119):DG(J44) DA(I120):DT(J43) DG(I121):DC(J42) DA(I122):DT(J41) DA(I123):DT(J40) DT(I124):DA(J39) DT(I125):DA(J38) DG(I126):DC(J37) DT(I127):DA(J36) DC(I128):DG(J35) DC(I129):DG(J34) DA(I130):DT(J33) DG(I131):DC(J32) DC(I132):DG(J31) DA(I133):DT(J30) DG(I134):DC(J29) DG(I135):DC(J28) DG(I136):DC(J27) DA(I137):DT(J26) DT(I138):DA(J25) DT(I139):DA(J24) DG(I140):DC(J23) DT(I141):DA(J22) DG(I142):DC(J21) DC(I143):DG(J20) DA(I144):DT(J19) DA(I145):DT(J18) DG(I146):DC(J17) DC(I147):DG(J16) DT(I148):DA(J15) DT(I149):DA(J14) DG(I150):DC(J13) DT(I151):DA(J12) DG(I152):DC(J11) DA(I153):DT(J10) DA(I154):DT(J9) DT(I155):DA(J8) DA(I156):DT(J7) DA(I157):DT(J6) DA(I158):DT(J5) DG(I159):DC(J4) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akaksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlRDniqgitkpairrlarrggvkrisGliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >7u0j_H:Histone-fold; title=STRUCTURE OF 162BP LIN28B NUCLEOSOME organism=? DNA sequence DC(J4):DG(I159) DT(J5):DA(I158) DT(J6):DA(I157) DT(J7):DA(I156) DA(J8):DT(I155) DT(J9):DA(I154) DT(J10):DA(I153) DC(J11):DG(I152) DA(J12):DT(I151) DC(J13):DG(I150) DA(J14):DT(I149) DA(J15):DT(I148) DG(J16):DC(I147) DC(J17):DG(I146) DT(J18):DA(I145) DT(J19):DA(I144) DG(J20):DC(I143) DC(J21):DG(I142) DA(J22):DT(I141) DC(J23):DG(I140) DA(J24):DT(I139) DA(J25):DT(I138) DT(J26):DA(I137) DC(J27):DG(I136) DC(J28):DG(I135) DC(J29):DG(I134) DT(J30):DA(I133) DG(J31):DC(I132) DC(J32):DG(I131) DT(J33):DA(I130) DG(J34):DC(I129) DG(J35):DC(I128) DA(J36):DT(I127) DC(J37):DG(I126) DA(J38):DT(I125) DA(J39):DT(I124) DT(J40):DA(I123) DT(J41):DA(I122) DC(J42):DG(I121) DT(J43):DA(I120) DG(J44):DC(I119) DA(J45):DT(I118) DG(J46):DC(I117) DT(J47):DA(I116) DG(J48):DC(I115) DA(J49):DT(I114) DT(J50):DA(I113) DG(J51):DC(I112) DG(J52):DC(I111) DC(J53):DG(I110) DA(J54):DT(I109) DG(J55):DC(I108) DC(J56):DG(I107) DT(J57):DA(I106) DC(J58):DG(I105) DC(J59):DG(I104) DC(J60):DG(I103) DA(J61):DT(I102) DC(J62):DG(I101) DC(J63):DG(I100) DT(J64):DA(I99) DT(J65):DA(I98) DT(J66):DA(I97) DC(J67):DG(I96) DC(J68):DG(I95) DT(J69):DA(I94) DT(J70):DA(I93) DC(J71):DG(I92) DT(J72):DA(I91) DT(J73):DA(I90) DC(J74):DG(I89) DC(J75):DG(I88) DT(J76):DA(I87) DT(J77):DA(I86) DC(J78):DG(I85) DA(J79):DT(I84) DC(J80):DG(I83) DT(J81):DA(I82) DT(J82):DA(I81) DA(J83):DT(I80) DG(J84):DC(I79) DA(J85):DT(I78) DC(J86):DG(I77) DT(J87):DA(I76) DA(J88):DT(I75) DC(J89):DG(I74) DA(J90):DT(I73) DT(J91):DA(I72) DT(J92):DA(I71) DT(J93):DA(I70) DA(J94):DT(I69) DT(J95):DA(I68) DT(J96):DA(I67) DC(J97):DG(I66) DA(J98):DT(I65) DG(J99):DC(I64) DC(J100):DG(I63) DA(J101):DT(I62) DT(J102):DA(I61) DC(J103):DG(I60) DT(J104):DA(I59) DG(J105):DC(I58) DT(J106):DA(I57) DA(J107):DT(I56) DT(J108):DA(I55) DT(J109):DA(I54) DG(J110):DC(I53) DT(J111):DA(I52) DT(J112):DA(I51) DG(J113):DC(I50) DG(J114):DC(I49) DA(J115):DT(I48) DG(J116):DC(I47) DT(J117):DA(I46) DA(J118):DT(I45) DA(J119):DT(I44) DG(J120):DC(I43) DT(J121):DA(I42) DT(J122):DA(I41) DC(J123):DG(I40) DC(J124):DG(I39) DA(J125):DT(I38) DT(J126):DA(I37) DG(J127):DC(I36) DT(J128):DA(I35) DT(J129):DA(I34) DA(J130):DT(I33) DA(J131):DT(I32) DT(J132):DA(I31) DA(J133):DT(I30) DC(J134):DG(I29) DT(J135):DA(I28) DC(J136):DG(I27) DA(J137):DT(I26) DC(J138):DG(I25) DC(J139):DG(I24) DA(J140):DT(I23) DC(J141):DG(I22) DT(J142):DA(I21) DG(J143):DC(I20) DA(J144):DT(I19) DG(J145):DC(I18) DG(J146):DC(I17) DA(J147):DT(I16) DT(J148):DA(I15) DA(J149):DT(I14) DT(J150):DA(I13) DG(J151):DC(I12) DT(J152):DA(I11) chainH ( 3) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >7u19_BCE: title=RFC:PCNA BOUND TO NICKED DNA organism=? DNA sequence DG(I1):DC(J50) DC(I2):DG(J49) DA(I3):DT(J48) DG(I4):DC(J47) DA(I5):DT(J46) DC(I6):DG(J45) DA(I7):DT(J44) DC(I8):DG(J43) DT(I9):DA(J42) DA(I10):DT(J41) DC(I11):DG(J40) DG(I12):DC(J39) DA(I13):DT(J38) DG(I14):DC(J37) DT(I15):DA(J36) DA(I16):DT(J35) DC(I17):DG(J34) DA(I18):DT(J33) DA(I19):DT(J32) DA(I20):DT(J31) chainB (143) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 (145) ASN148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 chainC (148) PRO155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainE (321) ASN336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (322) LYS337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 prot.sequence tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnQsNkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnnk/rskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahkltPallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenet/wvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgnndriviqellkevaqmehrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgNKaifhlegfiakvmccl >7u19_E:P-loop_containing_nucleoside_triphosphate_hydrolases;post-AAA+_oligomerization_domain-like; title=RFC:PCNA BOUND TO NICKED DNA organism=? DNA sequence DG(I1):DC(J50) DC(I2):DG(J49) DA(I3):DT(J48) DG(I4):DC(J47) DA(I5):DT(J46) DC(I6):DG(J45) DA(I7):DT(J44) DC(I8):DG(J43) DT(I9):DA(J42) DA(I10):DT(J41) DC(I11):DG(J40) DG(I12):DC(J39) DA(I13):DT(J38) DG(I14):DC(J37) DT(I15):DA(J36) DA(I16):DT(J35) DC(I17):DG(J34) DA(I18):DT(J33) DA(I19):DT(J32) DA(I20):DT(J31) chainE (321) ASN336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (322) LYS337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 prot.sequence wvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgnndriviqellkevaqmehrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgNKaifhlegfiakvmccl >7u1t_ABCD:Viral_DNA-binding_domain; title=EBNA1 DNA BINDING DOMAIN (401-641) BINDS TO HALF DYAD SYMMETRY ELEMENT organism=? DNA sequence DA(F3):DT(E59) DC(F4):DG(E58) DC(F5):DG(E57) DC(F6):DG(E56) DT(F7):DA(E55) DA(F8):DT(E54) DA(F9):DT(E53) DT(F10):DA(E52) DT(F11):DA(E51) DC(F12):DG(E50) DA(F13):DT(E49) DA(F14):DT(E48) DT(F15):DA(E47) DA(F16):DT(E46) DG(F17):DC(E45) DC(F18):DG(E44) DA(F19):DT(E43) DT(F20):DA(E42) DA(F21):DT(E41) DT(F22):DA(E40) DG(F23):DC(E39) DT(F24):DA(E38) DA(F26):DT(E36) DC(F27):DG(E35) DC(F28):DG(E34) DC(F29):DG(E33) DA(F30):DT(E32) DA(F31):DT(E31) DC(F32):DG(E30) DG(F33):DC(E29) DG(F34):DC(E28) DG(F35):DC(E27) DA(F36):DT(E26) DA(F37):DT(E25) DG(F38):DC(E24) DC(F39):DG(E23) DA(F40):DT(E22) DT(F41):DA(E21) DA(F42):DT(E20) DT(F43):DA(E19) DG(F44):DC(E18) DC(F45):DG(E17) DT(F46):DA(E16) DA(F47):DT(E15) DT(F48):DA(E14) DC(F49):DG(E13) DG(F50):DC(E12) DA(F51):DT(E11) DA(F52):DT(E10) DT(F53):DA(E9) DT(F54):DA(E8) DA(F55):DT(E7) DG(F56):DC(E5) DG(F57):DC(E4) DT(F59):DA(E3) DT(F60):DA(E2) DA(F61):DT(E1) chainA ( 23) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 2) ASP455 0 0 0 0 0 0 0 0 0 0 0 6 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) LYS461 0 0 0 0 0 0 0 0 0 0 0 3 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS477 0 0 0 0 0 0 0 0 0 8 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR515 0 0 0 0 0 0 0 0 0 0 6 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN519 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 24) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PHE478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LYS467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 ( 26) PHE478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 0 ( 66) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence paddpgegpstgprgqgdggrrKkggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggskTslYnlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppm/gDggrrkKggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmve/paddpgegpstgprgqgdggrrkKggWFgkhrgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppm/qgdggrrKKggWFgKhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYnlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppm >7u1t_B:Viral_DNA-binding_domain; title=EBNA1 DNA BINDING DOMAIN (401-641) BINDS TO HALF DYAD SYMMETRY ELEMENT organism=? DNA sequence DT(E1):DA(F61) DA(E2):DT(F60) DA(E3):DT(F59) DC(E4):DG(F57) DC(E5):DG(F56) DT(E7):DA(F55) DA(E8):DT(F54) DA(E9):DT(F53) DT(E10):DA(F52) DT(E11):DA(F51) DC(E12):DG(F50) DG(E13):DC(F49) DA(E14):DT(F48) DT(E15):DA(F47) DA(E16):DT(F46) DG(E17):DC(F45) DC(E18):DG(F44) DA(E19):DT(F43) DT(E20):DA(F42) DA(E21):DT(F41) DT(E22):DA(F40) DG(E23):DC(F39) DC(E24):DG(F38) DT(E25):DA(F37) DT(E26):DA(F36) DC(E27):DG(F35) DC(E28):DG(F34) DC(E29):DG(F33) DG(E30):DC(F32) DT(E31):DA(F31) DT(E32):DA(F30) DG(E33):DC(F29) DG(E34):DC(F28) DG(E35):DC(F27) DT(E36):DA(F26) DA(E38):DT(F24) DC(E39):DG(F23) DA(E40):DT(F22) DT(E41):DA(F21) DA(E42):DT(F20) DT(E43):DA(F19) DG(E44):DC(F18) DC(E45):DG(F17) DT(E46):DA(F16) DA(E47):DT(F15) DT(E48):DA(F14) DT(E49):DA(F13) DG(E50):DC(F12) DA(E51):DT(F11) DA(E52):DT(F10) DT(E53):DA(F9) DT(E54):DA(F8) DA(E55):DT(F7) DG(E56):DC(F6) DG(E57):DC(F5) DG(E58):DC(F4) DT(E59):DA(F3) chainB ( 2) ASP455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 14 6 0 0 0 0 0 0 0 0 0 0 0 ( 8) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 3 0 0 0 0 0 0 0 0 0 0 0 ( 11) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 0 0 0 0 0 0 0 ( 61) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 6 0 0 0 0 0 0 0 0 0 0 ( 65) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence gDggrrkKggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmve >7u22_CD: title=MYCOBACTERIUM TUBERCULOSIS RNA POLYMERASE SIGMA A HOLOENZYME OPEN PROMOTER COMPLEX CONTAINING UMN-7 organism=? DNA sequence DT(H15):DA(G13) DC(H16):DG(G12) DA(H17):DT(G11) DC(H18):DG(G10) DG(H19):DC(G9) DG(H20):DC(G8) DA(H21):DT(G7) DT(H22):DA(G6) DG(H23):DC(G5) chainC (439) GLU466 4 0 0 0 0 0 0 0 0 (440) ARG467 4 0 0 0 0 0 0 0 0 chainD prot.sequence snnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregede/dvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqCGlpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraptlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaa >7u32_A:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=MVV CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME AT 3.4 A RESOLUTION organism=VISNA/MAEDI VIRUS EV1 KV1772 DNA sequence DG(Y4):DC(Z18) DC(Y5):DG(Z17) DG(Y6):DC(Z16) DA(Y7):DT(Z15) DG(Y8):DC(Z14) DA(Y9):DT(Z13) DT(Y10):DA(Z12) DC(Y11):DG(Z11) DC(Y12):DG(Z10) DG(Y13):DC(Z9) DC(Y14):DG(Z8) DT(Y15):DA(Z7) DC(Y16):DG(Z6) DC(Y17):DG(Z5) chainA (148) GLN148 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ALA151 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) GLU154 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ARG155 0 6 17 6 0 0 0 0 0 0 0 0 0 0 (158) GLN158 8 11 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wieniplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkmpstlrgsnkrgidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpQsqAlvERthQtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk >7u32_AFL:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=MVV CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME AT 3.4 A RESOLUTION organism=VISNA/MAEDI VIRUS EV1 KV1772 DNA sequence DG(Y4):DC(Z18) DC(Y5):DG(Z17) DG(Y6):DC(Z16) DA(Y7):DT(Z15) DG(Y8):DC(Z14) DA(Y9):DT(Z13) DT(Y10):DA(Z12) DC(Y11):DG(Z11) DC(Y12):DG(Z10) DG(Y13):DC(Z9) DC(Y14):DG(Z8) DT(Y15):DA(Z7) DC(Y16):DG(Z6) DC(Y17):DG(Z5) chainA (148) GLN148 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ALA151 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) GLU154 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ARG155 0 6 17 6 0 0 0 0 0 0 0 0 0 0 (158) GLN158 8 11 1 0 0 0 0 0 0 0 0 0 0 0 chainF chainL (172) ARG231 0 0 0 0 0 1 8 8 0 0 0 0 0 0 prot.sequence wieniplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkmpstlrgsnkrgidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpQsqAlvERthQtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk/niplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlknTleKliPMfnAfesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk/idhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkRghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk >7u32_DIN:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=MVV CLEAVED SYNAPTIC COMPLEX (CSC) INTASOME AT 3.4 A RESOLUTION organism=VISNA/MAEDI VIRUS EV1 KV1772 DNA sequence DG(X4):DC(W18) DC(X5):DG(W17) DG(X6):DC(W16) DA(X7):DT(W15) DG(X8):DC(W14) DA(X9):DT(W13) DT(X10):DA(W12) DC(X11):DG(W11) DC(X12):DG(W10) DG(X13):DC(W9) DC(X14):DG(W8) DT(X15):DA(W7) DC(X16):DG(W6) DC(X17):DG(W5) chainD (172) ARG231 0 0 0 0 0 1 8 8 0 0 0 0 0 0 chainI (148) GLN148 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) ALA151 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) GLU154 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ARG155 1 6 15 6 0 0 0 0 0 0 0 0 0 0 (158) GLN158 8 10 0 0 0 0 0 0 0 0 0 0 0 0 chainN prot.sequence idhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkRghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk/wieniplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkmpstlrgsnkrgidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpQsqAlvERthQtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk/niplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlknTleKliPMfnAfesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk >7u47_B:Histone-fold; title=CRYOEM STRUCTURE OF CENP-N PROMOTED NUCLEOSOME STACKS WITH CENP-A AND PALINDROMIC ALPHA SATELLITE DNA SEQUENCE organism=HOMO SAPIENS DNA sequence DT(I-72):DA(J72) DC(I-71):DG(J71) DA(I-70):DT(J70) DA(I-69):DT(J69) DT(I-68):DA(J68) DA(I-67):DT(J67) DT(I-66):DA(J66) DC(I-65):DG(J65) DC(I-64):DG(J64) DA(I-63):DT(J63) DC(I-62):DG(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DG(I-59):DC(J59) DC(I-58):DG(J58) DA(I-57):DT(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DT(I-54):DA(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DT(I-51):DA(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DA(I-47):DT(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DG(I-43):DC(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DT(I-40):DA(J40) DA(I-39):DT(J39) DT(I-38):DA(J38) DT(I-37):DA(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DT(I-29):DA(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DT(I-22):DA(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DA(I-19):DT(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DG(I-16):DC(J16) DG(I-15):DC(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DT(I-12):DA(J12) DG(I-11):DC(J11) DT(I-10):DA(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DG(I-6):DC(J6) DC(I-5):DG(J5) DT(I-4):DA(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DA(I4):DT(J-4) DG(I5):DC(J-5) DC(I6):DG(J-6) DT(I7):DA(J-7) DG(I8):DC(J-8) DA(I9):DT(J-9) DA(I10):DT(J-10) DC(I11):DG(J-11) DA(I12):DT(J-12) DT(I13):DA(J-13) DG(I14):DC(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DT(I18):DA(J-18) DT(I19):DA(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DA(I22):DT(J-22) DT(I23):DA(J-23) DG(I24):DC(J-24) DG(I25):DC(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DT(I31):DA(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DC(I35):DG(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DA(I38):DT(J-38) DT(I39):DA(J-39) DA(I40):DT(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DC(I43):DG(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DT(I47):DA(J-47) DG(I48):DC(J-48) DG(I49):DC(J-49) DT(I50):DA(J-50) DA(I51):DT(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DT(I57):DA(J-57) DG(I58):DC(J-58) DC(I59):DG(J-59) DA(I60):DT(J-60) DG(I61):DC(J-61) DG(I62):DC(J-62) DT(I63):DA(J-63) DG(I64):DC(J-64) DG(I65):DC(J-65) DA(I66):DT(J-66) DT(I67):DA(J-67) DA(I68):DT(J-68) DT(I69):DA(J-69) DT(I70):DA(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >7u4d_LMNOPQRS:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYOEM STRUCTURE OF CENP-N PROMOTED NUCLEOSOME STACKS WITH CENP-A AND 601 DNA SEQUENCE organism=HOMO SAPIENS DNA sequence DA(T-68):DT(U68) DG(T-67):DC(U67) DA(T-66):DT(U66) DA(T-65):DT(U65) DT(T-64):DA(U64) DC(T-63):DG(U63) DC(T-62):DG(U62) DG(T-61):DC(U61) DG(T-60):DC(U60) DT(T-59):DA(U59) DG(T-58):DC(U58) DC(T-57):DG(U57) DC(T-56):DG(U56) DG(T-55):DC(U55) DA(T-54):DT(U54) DG(T-53):DC(U53) DG(T-52):DC(U52) DC(T-51):DG(U51) DC(T-50):DG(U50) DG(T-49):DC(U49) DC(T-48):DG(U48) DT(T-47):DA(U47) DC(T-46):DG(U46) DA(T-45):DT(U45) DA(T-44):DT(U44) DT(T-43):DA(U43) DT(T-42):DA(U42) DG(T-41):DC(U41) DG(T-40):DC(U40) DT(T-39):DA(U39) DC(T-38):DG(U38) DG(T-37):DC(U37) DT(T-36):DA(U36) DA(T-35):DT(U35) DG(T-34):DC(U34) DA(T-33):DT(U33) DC(T-32):DG(U32) DA(T-31):DT(U31) DG(T-30):DC(U30) DC(T-29):DG(U29) DT(T-28):DA(U28) DC(T-27):DG(U27) DT(T-26):DA(U26) DA(T-25):DT(U25) DG(T-24):DC(U24) DC(T-23):DG(U23) DA(T-22):DT(U22) DC(T-21):DG(U21) DC(T-20):DG(U20) DG(T-19):DC(U19) DC(T-18):DG(U18) DT(T-17):DA(U17) DT(T-16):DA(U16) DA(T-15):DT(U15) DA(T-14):DT(U14) DA(T-13):DT(U13) DC(T-12):DG(U12) DG(T-11):DC(U11) DC(T-10):DG(U10) DA(T-9):DT(U9) DC(T-8):DG(U8) DG(T-7):DC(U7) DT(T-6):DA(U6) DA(T-5):DT(U5) DC(T-4):DG(U4) DG(T-3):DC(U3) DC(T-2):DG(U2) DG(T-1):DC(U1) DC(T0):DG(U0) DT(T1):DA(U-1) DG(T2):DC(U-2) DT(T3):DA(U-3) DC(T4):DG(U-4) DC(T5):DG(U-5) DC(T6):DG(U-6) DC(T7):DG(U-7) DC(T8):DG(U-8) DG(T9):DC(U-9) DC(T10):DG(U-10) DG(T11):DC(U-11) DT(T12):DA(U-12) DT(T13):DA(U-13) DT(T14):DA(U-14) DT(T15):DA(U-15) DA(T16):DT(U-16) DA(T17):DT(U-17) DC(T18):DG(U-18) DC(T19):DG(U-19) DG(T20):DC(U-20) DC(T21):DG(U-21) DC(T22):DG(U-22) DA(T23):DT(U-23) DA(T24):DT(U-24) DG(T25):DC(U-25) DG(T26):DC(U-26) DG(T27):DC(U-27) DG(T28):DC(U-28) DA(T29):DT(U-29) DT(T30):DA(U-30) DT(T31):DA(U-31) DA(T32):DT(U-32) DC(T33):DG(U-33) DT(T34):DA(U-34) DC(T35):DG(U-35) DC(T36):DG(U-36) DC(T37):DG(U-37) DT(T38):DA(U-38) DA(T39):DT(U-39) DG(T40):DC(U-40) DT(T41):DA(U-41) DC(T42):DG(U-42) DT(T43):DA(U-43) DC(T44):DG(U-44) DC(T45):DG(U-45) DA(T46):DT(U-46) DG(T47):DC(U-47) DG(T48):DC(U-48) DC(T49):DG(U-49) DA(T50):DT(U-50) DC(T51):DG(U-51) DG(T52):DC(U-52) DT(T53):DA(U-53) DG(T54):DC(U-54) DT(T55):DA(U-55) DC(T56):DG(U-56) DA(T57):DT(U-57) DG(T58):DC(U-58) DA(T59):DT(U-59) DT(T60):DA(U-60) DA(T61):DT(U-61) DT(T62):DA(U-62) DA(T63):DT(U-63) DT(T64):DA(U-64) DA(T65):DT(U-65) DC(T66):DG(U-66) DA(T67):DT(U-67) DT(T68):DA(U-68) DC(T69):DG(U-69) chainL chainM chainN chainO chainP chainQ chainR ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainS prot.sequence gwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirg/rdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aksrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniq/rkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/qgwlkeirklqksthllirklpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgl/dniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqav/rkesysvyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >7u50_H:Histone-fold; title=APE1 BOUND TO A NUCLEOSOME CORE PARTICLE WITH AP-SITE AT SHL-6 organism=? DNA sequence DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >7u51_A:Histone-fold; title=NUCLEOSOME CORE PARTICLE WITH AP-SITE AT SHL-6 organism=? DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger >7u51_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE WITH AP-SITE AT SHL-6 organism=? DNA sequence DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainA ( 2) HIS39 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH prot.sequence pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/dNIQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfg/Rakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/sRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/vLRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvIrdavtytehakrktvtamdvvyalkrqgrtlygfg/kTRssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltAeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/rKEsysvyvykvlkqvhpdtgisskamgimnsfvndiferiageaSrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >7u52_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE WITH AP-SITE AT SHL-6.5 organism=? DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I144):DG(J5) DG(I145):DC(J3) DA(I146):DT(J2) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/dnIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/Rakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/Kesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/dnIQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfg/kaKTrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyLtaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/sRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >7u53_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=NUCLEOSOME CORE PARTICLE WITH AP-SITE AT SHL0 organism=? DNA sequence DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainA ( 2) HIS39 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ARG49 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 12) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH prot.sequence pHRyrpgtvalReirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/dniqgitkpaiRrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/rakaktrssraGlqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger/rdNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ktRssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp/srKesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >7u5d_AI: title=I-F3B CASCADE-TNIQ FULL R-LOOP COMPLEX organism=? DNA sequence DT(31):DC(24) DT(32):DT(23) DA(33):DG(22) DC(34):DA(21) DC(35):DA(20) DT(36):DG(2-1) DC(37):DC(2-2) DA(341):DT(2-3) DG(342):DC(2-4) DT(343):DA(2-5) DG(344):DC(2-6) DC(345):DG(2-7) DC(346):DG(2-8) DG(347):DC(2-9) DG(348):DC(2-10) DG(349):DC(2-11) DA(350):DT(2-12) DT(351):DA(2-13) DG(352):DC(2-14) DT(353):DA(2-15) DG(354):DC(2-16) DG(355):DC(2-17) DC(356):DG(2-18) DT(357):DA(2-19) chainA (111) SER130 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) ALA247 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI ( 53) ARG59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (329) VAL342 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) ARG369 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (364) SER377 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) PRO378 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) HIS379 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence drqlrrylapysaeigvdgaekmalvvllnltlkrdrveslcdeglarqllsdeghitnclhtvrwlhthnlkypdarvsgerliinapplipgvissaglpmrmgwahdSsdinlaklfgtsfryrddstnlalqlvarsktweqaliglgltqqqldiwcqllasnlenntfptvvspfskqvrflyqgnycvvtpvvshallaqlqnvvhekklqctyihhdhpAsvgslvgalggkvavldypppvngqslfdrsvfndhvfidalkhvisrpgltrkqqrqlrlsalrylrrqlaiwlgpiiewrdeivssgsgglelelitqpkkmlpelmlqvagrfhlelqnhsagrrfafhpalmapiksqilwllrqlaylhlsgltvydasalanpylcgipslsalagfchdyerrlqsligqsvyfrglawylgryslvtgkhlpepsksadpksvsairrpglldgrycdlgmdliievhiptggslpfttcldllrvalparfaggclhppslyeeynwctvyqdkstlftvlsrlprygcwiypsdadlrsfeelsealaldrrlrpvatgfvfleepveragsiegqhvyaesaigtalcinpvemrlagkkrffgagfwqln/pepfadealesyflrlsqengferyrifsgsvqdwlhttdhaaagafplelsRlnifhasrssglrvralqlvdrltdgapfrllqlalchsaisfgnhykavhrsgvdiplsfirvhqipccpdclresayvrqcwhfkpyvgchrhggrliyscpacgeslnylasesinhcqcgfdlrtpdeiqlsalaygcsfessnpllaigslsarfgalywyqqrylsdheavrddraltkaighftawpdafwrelqqmvddalvrqtkplnhtdfvdvfgsvvadcrqipmrntgqnfilknligfltdlvarhpqcrvanvgdlllsaVdaatllstsveqvrrlhhegflplsiRpasrntvSPHravfhlrhvvelrqarmqshh >7u5d_BCDEFG: title=I-F3B CASCADE-TNIQ FULL R-LOOP COMPLEX organism=? DNA sequence DA(2-19) DG(2-18) DC(2-17) DC(2-16) DA(2-15) DC(2-14) DA(2-13) DT(2-12) DC(2-11) DC(2-10) DC(2-9) DG(2-8) DG(2-7) DC(2-6) DA(2-5) DC(2-4) DT(2-3) DC(2-2) DG(2-1) DA(20) DA(21) DG(22) DT(23) DC(24) DC(25) DC(26) DC(27) DA(28) DA(29) DC(210) DT(211) DT(212) DG(213) DG(214) DA(215) DT(216) DG(217) DA(218) DT(219) DT(220) DT(221) DC(222) DT(223) DT(224) DC(225) DC(226) DA(227) DG(228) DT(229) DC(230) DC(231) DT(232) DG(233) DG(234) DT(235) DA(236) DA(237) chainB ( 36) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 65) SER67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 67) PRO69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 ( 68) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 (222) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (225) ARG227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 chainC ( 65) SER67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PRO69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (233) SER235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) LEU340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (340) GLN342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 chainD ( 4) HIS6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PRO69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) GLU226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) HIS231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) SER235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) LEU340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) GLN342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) HIS6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PRO69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) GLU226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) SER235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) LEU340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) GLN342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 4) HIS6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PRO69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) LEU340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) GLN342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 4) HIS6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) LEU340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) GLN342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lcthlsysrslspgkavffyktaesdfvplrievaKisgqkcgytegfdanlkpknieryelaySNPQtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkFteRpddhsvasrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlessegggvelpgevhylmavlvkgglfqkg/lcthlsysrslspgkavffyktaesdfvplrievakisgqkcgytegfdanlkpknieryelaySNPQtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkFterpddhsvaSrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlessegggvelpgevhylmavlvkggLfQkg/lctHlsysrslspgkavffyktaesdfvplrievakisgqkcgytegfdanlkpknieryelaySNPQtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkftErpddHsvaSrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlessegggvelpgevhylmavlvkggLfQkg/lctHlsysrslspgkavffyktaesdfvplrievaKisgqkcgytegfdanlkpknieryelaySNPQtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkFtErpddhsvaSrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlessegggvelpgevhylmavlvkggLfQkg/lctHlsysrslspgkavffyktaesdfvplrievakisgqkcgytegfdanlkpknieryelaySNPQtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkFterpddhsvasrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlessegggvelpgevhylmavlvkggLfQkg/lctHlsysrslspgkavffyktaesdfvplrievakipqtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkFtesrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlesselpgevhylmavlvkggLfQkg >7u5d_E: title=I-F3B CASCADE-TNIQ FULL R-LOOP COMPLEX organism=? DNA sequence DA(2-19) DG(2-18) DC(2-17) DC(2-16) DA(2-15) DC(2-14) DA(2-13) DT(2-12) DC(2-11) DC(2-10) DC(2-9) DG(2-8) DG(2-7) DC(2-6) DA(2-5) DC(2-4) DT(2-3) DC(2-2) DG(2-1) DA(20) DA(21) DG(22) DT(23) DC(24) DC(25) DC(26) DC(27) DA(28) DA(29) DC(210) DT(211) DT(212) DG(213) DG(214) DA(215) DT(216) DG(217) DA(218) DT(219) DT(220) DT(221) DC(222) DT(223) DT(224) DC(225) DC(226) DA(227) DG(228) DT(229) DC(230) DC(231) DT(232) DG(233) DG(234) DT(235) DA(236) DA(237) chainE ( 4) HIS6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) LYS38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PRO69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) GLU226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) SER235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) LEU340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) GLN342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lctHlsysrslspgkavffyktaesdfvplrievaKisgqkcgytegfdanlkpknieryelaySNPQtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkFtErpddhsvaSrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlessegggvelpgevhylmavlvkggLfQkg >7u5e_BCDEFG: title=I-F3B CASCADE-TNIQ PARTIAL R-LOOP COMPLEX organism=? DNA sequence DA(236) DT(235) DG(234) DG(233) DT(232) DC(231) DC(230) DT(229) DG(228) DA(227) DC(226) DC(225) DT(224) DT(223) DC(222) DT(221) DT(220) DT(219) DA(218) DG(217) DC(25) DC(26) DC(27) DA(28) DA(29) DC(210) DT(211) DT(212) DG(213) DG(214) DA(215) DT(216):DG(217) chainB ( 65) SER67 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN68 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PRO69 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLN70 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) PHE224 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ARG227 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) HIS231 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 64) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PRO69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) PHE224 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) HIS231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) LEU340 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) GLN342 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 65) SER67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 66) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 ( 67) PRO69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 68) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 36 (222) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) LEU340 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) GLN342 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 65) SER67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 66) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 ( 67) PRO69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 68) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 (222) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 (224) GLU226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (338) LEU340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 0 0 0 0 0 0 0 0 0 0 0 12 (340) GLN342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 4) HIS6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (222) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (338) LEU340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (340) GLN342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 chainG (296) LEU340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (298) GLN342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 prot.sequence lcthlsysrslspgkavffyktaesdfvplrievakisgqkcgytegfdanlkpknieryelaySNPQtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkFteRpddHsvasrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlessegggvelpgevhylmavlvkgglfqkg/lcthlsysrslspgkavffyktaesdfvplrievakisgqkcgytegfdanlkpknieryelaYSNPQtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkFterpddHsvasrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlessegggvelpgevhylmavlvkggLfQkg/lcthlsysrslspgkavffyktaesdfvplrievakisgqkcgytegfdanlkpknieryelaySNPQtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkFterpddhsvasrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlessegggvelpgevhylmavlvkggLfQkg/lcthlsysrslspgkavffyktaesdfvplrievakisgqkcgytegfdanlkpknieryelaySNPQtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkFtErpddhsvasrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlessegggvelpgevhylmavlvkggLfQkg/lctHlsysrslspgkavffyktaesdfvplrievakisgqkcgytegfdanlkpknieryelaysnpqtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkFterpddhsvasrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlessegggvelpgevhylmavlvkggLfQkg/lcthlsysrslspgkavffyktaesdfvplrievakipqtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkftesrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlesselpgevhylmavlvkggLfQkg >7u5e_C: title=I-F3B CASCADE-TNIQ PARTIAL R-LOOP COMPLEX organism=? DNA sequence DA(236) DT(235) DG(234) DG(233) DT(232) DC(231) DC(230) DT(229) DG(228) DA(227) DC(226) DC(225) DT(224) DT(223) DC(222) DT(221) DT(220) DT(219) DA(218) DG(217) DC(25) DC(26) DC(27) DA(28) DA(29) DC(210) DT(211) DT(212) DG(213) DG(214) DA(215) DT(216):DG(217) chainC ( 64) TYR66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) PRO69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLN70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) PHE224 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) HIS231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) LEU340 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) GLN342 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lcthlsysrslspgkavffyktaesdfvplrievakisgqkcgytegfdanlkpknieryelaYSNPQtieacyvppnvdelycrfslrveansmrpyvcsnpdvlrvmiglaqayqrlggynelarrysanvlrgiwlwrnqytqgtkieiktslgstyhipdarrlswsgdwpeleqkqleqltsemakalsqpdifwfadvtaslktgfcqeifpsqkFterpddHsvasrqlatvecsdgqlaacinpqkigaalqkiddwwandadlplrvheyganhealtalrhpatgqdfyhlltkaeqfvtvlessegggvelpgevhylmavlvkggLfQkg >7u6k_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE. organism=Escherichia coli K-12 DNA sequence DC(A4):DG(B32) DG(A5):DC(B31) DG(A6):DC(B30) DA(A7):DT(B29) DC(A8):DG(B28) DC(A9):DG(B27) DT(A10):DA(B26) DG(A11):DC(B25) DT(A12):DA(B24) DG(A13):DC(B23) DA(A14):DT(B22) DC(A15):DG(B21) DA(A16):DT(B20) DA(A17):DT(B19) DA(A18):DT(B18) DT(A19):DA(B17) DT(A20):DA(B16) DG(A21):DC(B15) DC(A22):DG(B14) DC(A23):DG(B13) DC(A24):DG(B12) DT(A25):DA(B11) DC(A26):DG(B10) DA(A27):DT(B9) DG(A28):DC(B8) DA(A29):DT(B7) DC(A30):DG(B6) DG(A31):DC(B5) DG(A32):DC(B4) chainC ( 54) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 55) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 56) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 ( 58) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 59) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 ( 62) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 92) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 3 0 0 0 0 (162) SER197 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) TYR198 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ARG200 0 0 0 0 0 0 3 9 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) PRO202 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ASP203 0 0 0 0 0 0 0 0 1 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG206 0 0 0 0 0 0 0 0 11 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG207 0 0 0 0 0 0 0 0 0 0 5 17 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG233 0 0 3 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sprivqsndlteaayslsrdqkrmlylfvdqirksdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >7u72_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:GROUND STATE AT PH7.0 (K+ MES) WITH 1 CA2+ ION organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 1 (380) ARG382 0 0 15 13 0 0 0 0 (421) PHE423 0 0 0 0 0 0 1 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u73_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 0.5 MM MN2+ FOR 1800S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 2 0 0 0 0 0 0 (376) LEU378 0 2 1 0 0 0 0 0 (380) ARG382 0 0 0 0 11 15 0 0 (421) PHE423 0 1 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u74_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 0.5 MM MN2+ FOR 1800S THEN WITH 10 MM MN2+ FOR 30S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 1 0 0 0 0 0 0 (376) LEU378 0 1 0 0 0 0 0 0 (380) ARG382 0 0 0 0 11 14 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u75_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 0.5 MM MN2+ FOR 1800S THEN WITH 10 MM MN2+ FOR 90S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DT(T3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) DT(T3):DT(T4) chainA ( 41) GLN38 0 0 0 0 0 0 0 0 3 ( 51) ILE48 0 0 0 0 0 0 0 0 1 ( 65) SER62 0 0 8 0 0 0 0 0 8 (320) SER322 0 0 0 0 0 0 2 1 0 (376) LEU378 0 0 0 0 0 0 1 0 0 (380) ARG382 0 0 0 8 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtrSmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u76_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 0.5 MM MN2+ FOR 1800S THEN WITH 10 MM MN2+ FOR 300S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DT(T3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) DT(T3):DT(T4) chainA ( 40) GLN38 0 0 0 0 0 0 0 0 4 ( 50) ILE48 0 0 0 0 0 0 0 0 1 ( 64) SER62 0 0 8 0 0 0 0 0 8 (319) SER322 0 0 0 0 0 0 3 2 0 (379) ARG382 0 0 0 7 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcfvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtrSmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u77_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 1.0 MM MG2+ FOR 40S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 1 0 (376) LEU378 0 0 0 0 0 0 1 0 (380) ARG382 0 0 1 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u78_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 1.0 MM MG2+ FOR 80S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 2 0 0 0 0 0 0 (380) ARG382 0 0 0 0 13 15 0 0 (421) PHE423 0 1 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u79_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 1.0 MM MG2+ FOR 140S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 1 1 (380) ARG382 0 0 2 1 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u7a_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 1.0 MM MG2+ FOR 200S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 0 2 0 0 0 0 0 0 (376) LEU378 0 2 2 0 0 0 0 0 (380) ARG382 0 0 0 0 11 15 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u7b_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 1.0 MM MG2+ FOR 250S organism=Homo sapiens DNA sequence DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (380) ARG382 0 0 9 13 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u7c_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 1.0 MM MG2+ FOR 300S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 1 (380) ARG382 0 0 15 10 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u7d_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 10.0 MM MN2+ FOR 30S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 2 0 0 0 0 0 0 (376) LEU378 0 1 1 0 0 0 0 0 (380) ARG382 0 0 0 0 10 13 0 0 (421) PHE423 0 1 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u7e_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 10.0 MM MN2+ FOR 60S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 2 1 (380) ARG382 0 7 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u7f_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 10.0 MM MN2+ FOR 90S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DT(T3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) DT(T3):DT(T4) chainA ( 41) GLN38 0 0 0 0 0 0 0 0 4 ( 51) ILE48 0 0 0 0 0 0 0 0 1 ( 65) SER62 0 0 6 0 0 0 0 0 6 (320) SER322 0 0 0 0 0 0 2 0 0 (376) LEU378 0 0 0 0 0 0 1 0 0 (380) ARG382 0 0 0 2 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtrSmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u7g_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 10.0 MM MN2+ FOR 120S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 3 0 0 0 0 0 0 (380) ARG382 0 0 0 0 0 1 5 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u7i_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 10.0 MM MN2+ FOR 180S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 3 1 (380) ARG382 0 0 15 9 0 0 0 0 (421) PHE423 0 0 0 0 0 0 3 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u7j_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 10.0 MM MN2+ FOR 300S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 2 0 0 0 0 0 0 (380) ARG382 0 0 0 0 7 11 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u7k_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 10.0 MM MN2+ FOR 600S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA ( 64) ARG61 0 0 0 0 0 0 0 10 (320) SER322 0 0 0 0 0 0 2 1 (376) LEU378 0 0 0 0 1 0 1 0 (380) ARG382 0 0 16 11 0 0 0 0 (421) PHE423 0 0 0 0 0 0 1 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u7l_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA TERNARY MISMATCH COMPLEX:REACTION WITH 1.0 MM MG2+ FOR 300S WITH FLIPPED-OUT PRODUCT organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) DG(P9):DT(T4) chainA ( 40) GLN38 0 0 0 0 0 0 0 0 4 ( 50) ILE48 0 0 0 0 0 0 0 0 15 ( 63) ARG61 0 0 0 0 0 0 0 18 14 ( 91) LEU89 0 0 0 0 0 0 0 0 1 (318) SER322 0 0 0 0 0 0 2 1 0 (320) ASN324 0 0 0 0 0 0 0 0 1 (378) ARG382 0 0 14 9 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcfvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtRsmwaddakklcpdlllaqvresrgkanLtkyreasvevmeimsrfavierasieayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u7o_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL T-A RICH SEQUENCE. organism=Escherichia coli K-12 DNA sequence DA(A-3):DT(B47) DT(A-2):DA(B46) DT(A-1):DA(B45) DA(A0):DT(B44) DC(A1):DG(B43) DC(A2):DG(B42) DT(A3):DA(B41) DG(A4):DC(B40) DT(A5):DA(B39) DG(A6):DC(B38) DA(A7):DT(B37) DC(A8):DG(B36) DA(A9):DT(B35) DA(A10):DT(B34) DA(A11):DT(B33) DT(A12):DA(B32) DT(A13):DA(B31) DG(A14):DC(B30) DC(A15):DG(B29) DC(A16):DG(B28) DC(A17):DG(B27) DT(A18):DA(B26) DC(A19):DG(B25) DA(A20):DT(B24) DG(A21):DC(B23) DA(A22):DT(B22) DC(A23):DG(B21) DG(A24):DC(B20) DG(A25):DC(B19) chainC ( 56) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 57) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 58) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 ( 60) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 61) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 ( 64) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 95) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 6 0 0 0 0 (165) SER197 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) TYR198 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG200 0 0 0 0 0 0 4 11 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) PRO202 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ASP203 0 0 0 0 0 0 0 0 1 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG206 0 0 0 0 0 0 0 0 11 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG207 0 0 0 0 0 0 0 0 0 0 4 14 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) ARG233 0 0 2 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyryesfpwfikpahspsRglysvhinpylipffinrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrditsm >7u7r_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX:NO ME2+ SOAKING organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 64) ARG61 17 0 0 0 0 0 0 0 (320) SER322 2 4 0 0 0 0 0 0 (376) LEU378 0 2 2 0 0 0 0 0 (380) ARG382 0 0 0 0 9 14 0 0 (421) PHE423 0 2 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u7s_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX IN 0.025 MM MG2+ FOR 600S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 4 1 (376) LEU378 0 0 0 0 0 2 1 0 (380) ARG382 0 0 17 9 0 0 0 0 (421) PHE423 0 0 0 0 0 0 1 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u7t_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX IN 0.05 MM MG2+ FOR 600S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 4 1 (376) LEU378 0 0 0 0 0 2 4 0 (380) ARG382 0 0 17 9 0 0 0 0 (421) PHE423 0 0 0 0 0 0 2 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u7u_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX IN 0.1 MM MG2+ FOR 600S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 3 1 (376) LEU378 0 0 0 0 0 2 1 0 (380) ARG382 0 0 15 10 0 0 0 0 (421) PHE423 0 0 0 0 0 0 1 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u7v_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX IN 0.4 MM MG2+ FOR 600S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 4 0 0 0 0 0 0 (376) LEU378 0 4 2 0 0 0 0 0 (380) ARG382 0 0 0 0 9 16 0 0 (421) PHE423 0 3 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u7w_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX IN 1.0 MM MG2+ FOR 600S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA ( 64) ARG61 0 0 0 0 0 0 0 12 (320) SER322 0 0 0 0 0 0 4 1 (376) LEU378 0 0 0 0 1 2 4 0 (380) ARG382 0 0 19 10 0 0 0 0 (421) PHE423 0 0 0 0 0 0 2 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u7x_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX IN 2.0 MM MG2+ FOR 600S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (320) SER322 1 4 0 0 0 0 0 0 (376) LEU378 0 2 1 0 0 0 0 0 (380) ARG382 0 0 0 0 9 18 0 0 (421) PHE423 0 2 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u7y_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX IN 0.06 MM MN2+ FOR 600S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 64) ARG61 1 0 0 0 0 0 0 0 (320) SER322 1 4 0 0 0 0 0 0 (376) LEU378 0 2 2 0 0 0 0 0 (380) ARG382 0 0 0 0 10 16 0 0 (421) PHE423 0 3 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u7z_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX IN 0.12 MM MN2+ FOR 600S organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 64) ARG61 10 0 0 0 0 0 0 0 (320) SER322 1 3 0 0 0 0 0 0 (376) LEU378 0 1 1 0 0 0 0 0 (380) ARG382 0 0 0 0 9 15 0 0 (421) PHE423 0 1 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u80_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX IN 0.25 MM MN2+ FOR 600S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 4 1 (376) LEU378 0 0 0 0 0 2 2 0 (380) ARG382 0 0 17 10 0 0 0 0 (421) PHE423 0 0 0 0 0 0 2 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u81_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX IN 0.5 MM MN2+ FOR 600S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 4 1 (376) LEU378 0 0 0 0 0 2 1 0 (380) ARG382 0 0 15 9 0 0 0 0 (421) PHE423 0 0 0 0 0 0 1 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u82_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX IN 1.0 MM MN2+ FOR 600S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 4 2 (376) LEU378 0 0 0 0 0 2 3 0 (380) ARG382 0 0 16 11 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >7u83_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX IN 3.0 MM MN2+ FOR 600S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 4 2 (376) LEU378 0 0 0 0 0 2 2 0 (380) ARG382 0 0 15 10 0 0 0 0 (421) PHE423 0 0 0 0 0 0 2 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7u84_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DGMPNPP TERNARY MISMATCH COMPLEX IN 6.0 MM MN2+ FOR 600S organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DC(P3):DG(T10) DG(P4):DC(T9) DT(P5):DA(T8) DC(P6):DG(T7) DA(P7):DT(T6) DT(P8):DA(T5) chainA (320) SER322 0 0 0 0 0 0 4 2 (376) LEU378 0 0 0 0 0 2 4 0 (380) ARG382 0 0 15 9 0 0 0 0 (421) PHE423 0 0 0 0 0 0 2 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlFlcatkfsas >7ub2_E: title=STRUCTURE OF RECT PROTEIN FROM LISTERIA INNOCCUA PHAGE A118 IN COMPLEX WITH 83-MER ANNEALED DUPLEX organism=? DNA sequence DT(Z15):DA(Y70) DT(Z16):DA(Y69) DT(Z17):DA(Y68) DT(Z18):DA(Y67) DT(Z19):DA(Y66) DT(Z20):DA(Y65) DT(Z21):DA(Y64) DT(Z22):DA(Y63) DT(Z23):DA(Y62) DT(Z24):DA(Y61) DT(Z25):DA(Y60) DT(Z26):DA(Y59) DT(Z27):DA(Y58) DT(Z28):DA(Y57) DT(Z29):DA(Y56) DT(Z30):DA(Y55) DT(Z31):DA(Y54) DT(Z32):DA(Y53) DT(Z33):DA(Y52) DT(Z34):DA(Y51) DT(Z35):DA(Y50) DT(Z36):DA(Y49) DT(Z37):DA(Y48) DT(Z38):DA(Y47) DT(Z39):DA(Y46) DT(Z40):DA(Y45) DT(Z41):DA(Y44) DT(Z42):DA(Y43) DT(Z43):DA(Y42) DT(Z44):DA(Y41) DT(Z45):DA(Y40) DT(Z46):DA(Y39) DT(Z47):DA(Y38) DT(Z48):DA(Y37) DT(Z49):DA(Y36) DT(Z50):DA(Y35) DT(Z51):DA(Y34) DT(Z52):DA(Y33) DT(Z53):DA(Y32) DT(Z54):DA(Y31) DT(Z55):DA(Y30) DT(Z56):DA(Y29) DT(Z57):DA(Y28) DT(Z58):DA(Y27) DT(Z59):DA(Y26) DT(Z60):DA(Y25) DT(Z61):DA(Y24) DT(Z62):DA(Y23) chainE ( 32) TYR65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 57) LYS90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 63) TRP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 19 ( 65) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 ( 66) PRO99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 67) TYR100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (159) SER192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (161) PHE194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence aptmrkkfekvldkkapqfltsllnlyngddYlqktdpmtvvtsamvaatldlpidKnlgyaWiVPYkgraqfqlgykgyiqlalrtgqyksinvievregellkwnrlteeieldldnntsekvvgycgyfqlingfektvywtrkeieahkqkfskSdFgwkkdydamakktvlrnmlskwgilsidmq >7ubl_A:DnaJ/Hsp40_cysteine-rich_domain; title=TRANSCRIPTION ANTITERMINATION FACTOR QLAMBDA IN COMPLEX WITH Q-LAMBDA- BINDING-ELEMENT DNA organism=Escherichia phage Lambda DNA sequence DC(B1):DG(C19) DA(B2):DT(C18) DC(B3):DG(C17) DC(B4):DG(C16) DC(B5):DG(C15) DA(B6):DT(C14) DA(B7):DT(C13) DT(B8):DA(C12) DT(B9):DA(C11) DT(B10):DA(C10) DT(B11):DA(C9) DA(B12):DT(C8) DT(B13):DA(C7) DT(B14):DA(C6) DC(B15):DG(C5) DA(B16):DT(C4) DA(B17):DT(C3) DT(B18):DA(C2) DG(B19):DC(C1) chainA ( 59) ARG119 0 0 6 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ASP120 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG146 0 0 0 2 13 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) GLN173 0 0 0 0 0 0 0 0 0 0 9 11 2 0 0 0 0 0 0 (114) PRO174 0 0 0 0 0 0 0 0 0 0 0 0 3 3 4 0 0 0 0 (117) SER177 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 (118) ARG178 0 0 0 0 0 0 0 0 0 0 0 0 5 6 14 8 0 0 0 prot.sequence sdkqkainylmqfahkvsgkyrgvaklegntkakvlqvlatfayadycrsaatpgarcRDchgtgravdiaktklwgrvvekecgRckgvgysrmpasaayravtmlipnltQPtwSRtvkplydalvvqchkeesiadni >7ubm_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=TRANSCRIPTION ANTITERMINATION COMPLEX: "PRE-ENGAGED" QLAMBDA-LOADING COMPLEX organism=? DNA sequence DT(13):DA(259) DA(14):DT(258) DT(15):DA(257) DT(16):DA(256) DG(17):DC(255) DA(18):DT(254) DA(19):DT(253) DT(110):DA(252) DA(111):DT(251) DA(112):DT(250) DA(113):DT(249) DA(114):DT(248) DT(115):DA(247) DT(116):DA(246) DG(117):DC(245) DG(118):DC(244) DG(119):DC(243) DT(120):DA(242) DA(121):DT(241) DA(122):DT(240) DA(123):DT(239) DT(124):DA(238) DT(125):DA(237) DT(126):DA(236) DG(127):DC(235) DA(128):DT(234) DC(129):DG(233) DA(130):DT(232) DC(131):DG(231) DT(132):DA(230) DA(133):DA(229) DT(134):DC(223) DA(135):DC(222) DA(136):DT(221) DT(137):DC(220) DG(138):DT(219) DG(139):DC(218) DG(140):DC(217) DT(146):DA(216) DC(147):DT(215) DG(148):DT(214) DC(149):DG(213) DT(150):DA(212) DC(151):DG(211) DG(152):DC(210) DT(153):DA(29) DT(154):DA(28) DG(155):DC(27) DT(156):DA(26) DG(157):DC(25) DG(158):DC(24) DT(159):DA(23) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 (444) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (449) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (536) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 (544) GLU546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (545) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfEVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >7ubm_CDFQ: title=TRANSCRIPTION ANTITERMINATION COMPLEX: "PRE-ENGAGED" QLAMBDA-LOADING COMPLEX organism=? DNA sequence DT(13):DA(259) DA(14):DT(258) DT(15):DA(257) DT(16):DA(256) DG(17):DC(255) DA(18):DT(254) DA(19):DT(253) DT(110):DA(252) DA(111):DT(251) DA(112):DT(250) DA(113):DT(249) DA(114):DT(248) DT(115):DA(247) DT(116):DA(246) DG(117):DC(245) DG(118):DC(244) DG(119):DC(243) DT(120):DA(242) DA(121):DT(241) DA(122):DT(240) DA(123):DT(239) DT(124):DA(238) DT(125):DA(237) DT(126):DA(236) DG(127):DC(235) DA(128):DT(234) DC(129):DG(233) DA(130):DT(232) DC(131):DG(231) DT(132):DA(230) DA(133):DA(229) DT(134):DC(223) DA(135):DC(222) DA(136):DT(221) DT(137):DC(220) DG(138):DT(219) DG(139):DC(218) DG(140):DC(217) DT(146):DA(216) DC(147):DT(215) DG(148):DT(214) DC(149):DG(213) DT(150):DA(212) DC(151):DG(211) DG(152):DC(210) DT(153):DA(29) DT(154):DA(28) DG(155):DC(27) DT(156):DA(26) DG(157):DC(25) DG(158):DC(24) DT(159):DA(23) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 (444) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (449) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (536) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 (544) GLU546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (545) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 chainD (241) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) ALA261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) ALA444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (343) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 75) ARG119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ASP120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG146 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) THR172 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) GLN173 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PRO174 0 0 0 0 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) SER177 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) ARG178 0 0 0 10 4 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfEVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfAtsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqlsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/eigrttDpVRmyMremgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfelarekfaelraqyvvtrdtikahataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqfldliqegniglmkavdkFEyrRgYkfSTYaTwWirQaiTrsiAdqatareakvlrmrfgidmntdytleevgkqfdvtRERiRQieakalrklr/agfgmaafcgkhelsqndkqkainylmqfahkvsgkyrgvaklegntkakvlqvlatfayadycrsaatpgarcRDchgtgravdiaktelwgrvvekecgRckgvgysrmpasaayravtmlipnlTQPtwSRtvkplydalvvqchkeesiadnilnavtr >7ubn_CDFNQ: title=TRANSCRIPTION ANTITERMINATION COMPLEX: NUSA-CONTAINING "ENGAGED" QLAMBDA-LOADING COMPLEX organism=? DNA sequence DT(13):DA(259) DA(14):DT(258) DT(15):DA(257) DT(16):DA(256) DG(17):DC(255) DA(18):DT(254) DA(19):DT(253) DT(110):DA(252) DA(111):DT(251) DA(112):DT(250) DA(113):DT(249) DA(114):DT(248) DT(115):DA(247) DT(116):DA(246) DG(117):DC(245) DG(118):DC(244) DG(119):DC(243) DT(120):DA(242) DA(121):DT(241) DA(122):DT(240) DA(123):DT(239) DT(124):DA(238) DT(125):DA(237) DT(126):DA(236) DG(127):DC(235) DA(128):DT(234) DC(129):DG(233) DA(130):DT(232) DC(131):DG(231) DT(132):DA(230) DA(133):DA(229) DT(134):DC(223) DA(135):DC(222) DA(136):DT(221) DT(137):DC(220) DG(138):DT(219) DG(139):DC(218) DG(140):DC(217) DT(146):DA(216) DC(147):DT(215) DG(148):DT(214) DC(149):DG(213) DT(150):DA(212) DC(151):DG(211) DG(152):DC(210) DT(153):DA(29) DT(154):DA(28) DG(155):DC(27) DT(156):DA(26) DG(157):DC(25) DG(158):DC(24) DT(159):DA(23) chainC (148) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (180) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 (196) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 0 0 0 0 0 0 (197) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (368) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (443) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (535) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (539) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 21 0 0 0 0 0 0 0 0 0 (543) GLU546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (544) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 chainD (241) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) LYS264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) ALA444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (343) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainQ (119) ARG119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) ASP120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) ARG146 0 0 0 0 0 0 0 0 0 0 0 0 0 14 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) LYS148 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) GLN173 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) PRO174 0 0 0 0 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) SER177 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ARG178 0 0 0 12 13 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfEVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqlsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/eigrttDpVRmyMremgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfelarekfaelraqyvvtrdtikahataqeeilklsevfkqfrlvpKqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqfldliqegniglmkavdkFEyrRgYkfSTYaTwWirqaitrsiAdqatareakvlrmrfgidmntdytleevgkqfdvtRERiRQieakalrklr/mnkeilAvVEavSnekalprEkifeaLesalatatkkkyeqeidvrvqidrksgdfdtfrrwlvvdevtqptkeitleaaryedeslnlgdyvedqiesvtfdrittqtakqvivqkvreaEramvvdqfrehegeiitgvvkkvnrdnisldlgnnaeavilredmlprenfrpgdrvrgvlysvrpeargaqlfvtrskpemlielfrievpeigeevieikaaardpgsrakiavktNdKRidpvgacvgmrgarvqavstelggeridivlwDDnpAqFviNAMaPaDvasivvdedKhtmdiaveagnlaqaigrngqnvrlasqlsgwelnVMT/mrlesvakfhspkspmmsdspratasdslsgtdvmaamgmaqsqagfgmaafcgkhelsqndkqkainylmqfahkvsgkyrgvaklegntkakvlqvlatfayadycrsaatpgarcRDchgtgravdiaktelwgrvvekecgRcKgvgysrmpasaayravtmlipnltQPtwSRtvkplydalvvqchkeesiadnilnavtr >7ubn_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=TRANSCRIPTION ANTITERMINATION COMPLEX: NUSA-CONTAINING "ENGAGED" QLAMBDA-LOADING COMPLEX organism=? DNA sequence DA(23):DT(159) DC(24):DG(158) DC(25):DG(157) DA(26):DT(156) DC(27):DG(155) DA(28):DT(154) DA(29):DT(153) DC(210):DG(152) DG(211):DC(151) DA(212):DT(150) DG(213):DC(149) DT(214):DC(147) DT(215):DT(146) DA(216):DT(141) DC(217):DG(140) DC(218):DG(139) DT(219):DG(138) DC(220):DT(137) DT(221):DA(136) DC(222):DA(135) DC(223):DT(134) DA(229):DA(133) DA(230):DT(132) DG(231):DC(131) DT(232):DA(130) DG(233):DC(129) DT(234):DA(128) DC(235):DG(127) DA(236):DT(126) DA(237):DT(125) DA(238):DT(124) DT(239):DA(123) DT(240):DA(122) DT(241):DA(121) DA(242):DT(120) DC(243):DG(119) DC(244):DG(118) DC(245):DG(117) DA(246):DT(116) DA(247):DT(115) DT(248):DA(114) DT(249):DA(113) DT(250):DA(112) DT(251):DA(111) DA(252):DT(110) DT(253):DA(19) DT(254):DA(18) DC(255):DG(17) DA(256):DT(16) DA(257):DT(15) DT(258):DA(14) DA(259):DT(13) chainF ( 7) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) LYS264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) ALA444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (343) GLN589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eigrttDpVRmyMremgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfelarekfaelraqyvvtrdtikahataqeeilklsevfkqfrlvpKqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytnrglqfldliqegniglmkavdkFEyrRgYkfSTYaTwWirqaitrsiAdqatareakvlrmrfgidmntdytleevgkqfdvtRERiRQieakalrklr >7ubu_A:S-adenosyl-L-methionine-dependent_methyltransferases;Chromo_domain-like; title=CRYSTAL STRUCTURE OF ZMET2 IN COMPLEX WITH HEMIMETHYLATED CAG DNA AND A HISTONE H3KC9ME2 PEPTIDE organism=ZEA MAYS DNA sequence DT(B1):DA(C18) DA(B2):DT(C17) DA(B3):DT(C16) DA(B4):DT(C15) DT(B5):DA(C14) DT(B6):DA(C13) 5MC(B7):DG(C12) DT(B8):DA(C11) DG(B9):C49(C10) DA(B10):DT(C9) DT(B11):DA(C8) DT(B12):DA(C7) DA(B13):DT(C6) DG(B14):DC(C5) DG(B15):DC(C4) DA(B16):DT(C3) DA(B17):DT(C2) DT(B18):DA(C1) chainA (336) CYS517 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 (337) GLN518 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (342) PHE523 0 0 0 0 0 0 0 2 0 9 0 0 0 0 0 0 0 0 (344) ARG525 0 0 0 0 0 0 4 18 10 0 0 0 0 0 0 0 0 0 (345) TYR526 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 (346) ARG527 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 (378) GLU559 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (379) ASN560 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (380) VAL561 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (382) ASP563 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (422) ARG603 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (424) ARG605 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 (595) TYR776 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 (599) PHE780 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 (606) LYS787 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (623) ARG804 0 0 0 0 0 1 9 30 0 0 0 0 0 0 0 0 0 0 (627) HIS808 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 (628) ASN809 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 (670) ASN851 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 prot.sequence hepefigspvaadearsnwpkrygreelkarchyrsakvdnvvyclgddvyvkageneadyigriteffegtdqchyftcrwffraedtvinslvsisvdghkhdprrvflseekndnvldciiskvkivhvdpnmdpkakaqliescdlyydmsysvaystfanistrtatlldlysgcggmstglclgaalsglkletrwavdfnsfacqslkynhpqtevrnekadeflallkewavlckkyvqqadedspldkdefvveklvgicyggsdrengiyfkvqwegygpeedtwepidnlsdcpqkirefvqeghkrkilplpgdvdvicggppcqgisgFnRYRnrdeplkdeknkqmvtfmdivaylkpkyvlmenvvDilKfadgylgkyalsclvamkyqarlgmmvagcyglpqfrmrvflwgalssmvlpkyplptydvvvrggapnafsqcmvaydetqkpslkkalllgdaisdlpkvqnhqpndvmeyggspktefqryirlsrkdmldwsfgegagpdegklldhqplrlnnddyervqqipvkkganfrdlkgvrvgannivewdpeiervklssgkplvpdYamsFikgkslKpfgrlwwdetvptvvtRaepHNqviihptqarvltirenarlqgfpdyyrlfgpikekyiqvgnavavpvaralgyclgqaylgesegsdplyqlppsftsv >7ufx_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SCAFFOLD-INSERT DUPLEXES (21MER AND 10MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE, RESPECTIVELY. organism=Escherichia coli K-12 DNA sequence DC(A2):DG(B42) DT(A3):DA(B41) DG(A4):DC(B40) DT(A5):DA(B39) DG(A6):DC(B38) DA(A7):DT(B37) DC(A8):DG(B36) DA(A9):DT(B35) DA(A10):DT(B34) DA(A11):DT(B33) DT(A12):DA(B32) DT(A13):DA(B31) DG(A14):DC(B30) DC(A15):DG(B29) DC(A16):DG(B28) DC(A17):DG(B27) DT(A18):DA(B26) DC(A19):DG(B25) DA(A20):DT(B24) DG(E21):DC(B23) DA(E22):DT(B22) DC(E23):DG(F21) DG(E24):DC(F20) DG(E25):DC(F19) DC(E26):DG(F18) DC(E27):DG(F17) DC(E28):DG(F16) DG(E29):DC(F15) DG(E30):DC(F14) chainC ( 55) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 56) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 1 0 0 0 0 0 0 0 0 0 (162) SER197 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) TYR198 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ARG200 0 3 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) PRO202 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ASP203 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG206 0 0 0 13 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG207 0 0 0 0 0 5 16 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffirftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgrqtthivfsfrdi >7ugw_ABCD:Type_II_DNA_topoisomerase; title=M. TUBERCULOSIS DNA GYRASE CLEAVAGE CORE BOUND TO DNA AND EVYBACTIN organism=? DNA sequence DA(V45) DT(V44) DG(V43) DC(V42) DC(V41) DG(V40) DA(V39) DA(V38) DA(V37) DG(V36) DT(V35) DC(V34) DG(V33) DG(V32) DC(V31) DA(V30) DT(V29) DC(V28) DC(V27) DC(V26) DG(V1) DG(V2):DC(V26) DC(V3):DG(V25) DC(V4):DG(V24) DC(V5):DG(V23) DT(V6):DA(V22) DA(V7):DT(V21) DC(V8):DG(V20) DG(V9):DC(V19) DG(V10):DC(V18) DC(V11):DG(V17) DT(V12):DA(V16) DG(V13):DA(V15) DA(V14) chainA ( 17) TYR31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG39 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) SER91 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (167) ILE181 0 0 7 3 0 0 0 0 0 0 0 0 0 15 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 55) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 4 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) LYS484 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 18) TYR31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 78) SER91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (168) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 20 0 0 0 0 0 chainD ( 52) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 ( 54) LYS484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 1 0 0 0 0 0 0 0 prot.sequence iepvdieqemqrsyidYamsvivgRalpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdaSiydslvrmaqpwslryplvdgqgnfgspgndppaamRftearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveergrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriiaa/elvrrkdigglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplRgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwqrsdpefaysdrerdglleaglkagkkinkedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfldv/riepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdaSiydslvrmaqpwslryplvdgqgnfgspgndppaamrftearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriia/elvrrkglpgkladcrstdprkselyvvegdsaggsaksgrdsmfqailplRgKiinvekaridrvlkntevqaiitalgtgihdefdigklryhkivlmadadvdgqhistllltllfrfmrplienghvflaqpplyklkwdpefaysdrerdglleakedgiqrykglgemdakelwettmdpsvrvlrqvtlddaaaadelfsilmgedvdarrsfitrnakdvrfld >7ugw_C:Type_II_DNA_topoisomerase; title=M. TUBERCULOSIS DNA GYRASE CLEAVAGE CORE BOUND TO DNA AND EVYBACTIN organism=? DNA sequence DA(V45) DT(V44) DG(V43) DC(V42) DC(V41) DG(V40) DA(V39) DA(V38) DA(V37) DG(V36) DT(V35) DC(V34) DG(V33) DG(V32) DC(V31) DA(V30) DT(V29) DC(V28) DC(V27) DC(V26) DG(V1) DG(V2):DC(V26) DC(V3):DG(V25) DC(V4):DG(V24) DC(V5):DG(V23) DT(V6):DA(V22) DA(V7):DT(V21) DC(V8):DG(V20) DG(V9):DC(V19) DG(V10):DC(V18) DC(V11):DG(V17) DT(V12):DA(V16) DG(V13):DA(V15) DA(V14) chainC ( 18) TYR31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 78) SER91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (168) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 20 0 0 0 0 0 prot.sequence riepvdieqemqrsyidYamsvivgralpevrdglkpvhrrvlyamfdsgfrpdrshaksarsvaetmgnyhphgdaSiydslvrmaqpwslryplvdgqgnfgspgndppaamrftearltplamemlreideetvdfipnydgrvqeptvlpsrfpnllangsggIavgmatnipphnlreladavfwalenhdadeeetlaavmgrvkgpdfptaglivgsqgtadayktgrgsirmrgvveveedsrgrtslvitelpyqvnhdnfitsiaeqvrdgklagisniedqssdrvglrivieikrdavakvvinnlykhtqlqtsfganmlaivdgvprtlrldqliryyvdhqldvivrrttyrlrkanerahilrglvkaldaldevialirasetvdiaraglielldideiqaqaildmqlrrlaalerqriiddlakieaeiadledilakperqrgivrdelaeivdrhgddrrtriia >7uik_T:Leucine_zipper_domain;Zn2/Cys6_DNA-binding_domain; title=MEDIATOR-PIC EARLY (TAIL A + UPSTREAM DNA & ACTIVATOR) organism=? DNA sequence DC(X2):DG(Y40) DC(X3):DG(Y39) DG(X4):DC(Y38) DG(X5):DC(Y37) DA(X6):DT(Y36) DG(X7):DC(Y35) DG(X8):DC(Y34) DA(X9):DT(Y33) DC(X10):DG(Y32) DA(X11):DT(Y31) DG(X12):DC(Y30) DT(X13):DA(Y29) DC(X14):DG(Y28) DC(X15):DG(Y27) DT(X16):DA(Y26) DC(X17):DG(Y25) DC(X18):DG(Y24) DC(X19):DG(Y23) DA(X21):DT(Y21) DC(X22):DG(Y20) DT(X23):DA(Y19) DG(X24):DC(Y18) DA(X25):DT(Y17) DC(X26):DG(Y16) DT(X27):DA(Y15) DG(X28):DC(Y14) DA(X29):DT(Y13) DC(X30):DG(Y12) DG(X31):DC(Y11) DT(X32):DA(Y10) DC(X33):DG(Y9) DG(X34):DC(Y8) DT(X35):DA(Y7) DA(X36):DT(Y6) DC(X37):DG(Y5) DG(X38):DC(Y4) chainT ( 11) LYS18 0 11 14 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) LEU19 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eqacdicrlkKLkcskekpkcakclknnwecryspktkrspltrahltevesrlerleqlfllifpredldmilkmdslqdikalltgl >7uik_TU:Leucine_zipper_domain;Zn2/Cys6_DNA-binding_domain; title=MEDIATOR-PIC EARLY (TAIL A + UPSTREAM DNA & ACTIVATOR) organism=? DNA sequence DC(Y4):DG(X38) DG(Y5):DC(X37) DT(Y6):DA(X36) DA(Y7):DT(X35) DC(Y8):DG(X34) DG(Y9):DC(X33) DA(Y10):DT(X32) DC(Y11):DG(X31) DG(Y12):DC(X30) DT(Y13):DA(X29) DC(Y14):DG(X28) DA(Y15):DT(X27) DG(Y16):DC(X26) DT(Y17):DA(X25) DC(Y18):DG(X24) DA(Y19):DT(X23) DG(Y20):DC(X22) DT(Y21):DA(X21) DG(Y23):DC(X19) DG(Y24):DC(X18) DG(Y25):DC(X17) DA(Y26):DT(X16) DG(Y27):DC(X15) DG(Y28):DC(X14) DA(Y29):DT(X13) DC(Y30):DG(X12) DT(Y31):DA(X11) DG(Y32):DC(X10) DT(Y33):DA(X9) DC(Y34):DG(X8) DC(Y35):DG(X7) DT(Y36):DA(X6) DC(Y37):DG(X5) DC(Y38):DG(X4) DG(Y39):DC(X3) DG(Y40):DC(X2) chainT ( 11) LYS18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 14 11 0 ( 12) LEU19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainU ( 11) LYS18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eqacdicrlkKLkcskekpkcakclknnwecryspktkrspltrahltevesrlerleqlfllifpredldmilkmdslqdikalltgl/eqacdicrlkKlkcskekpkcakclknnwecryspktkrspltrahltevesrlerleqlfllifpredldmilkmdslqdikalltgl >7uin_D:DNA/RNA_polymerases; title=CRYOEM STRUCTURE OF AN GROUP II INTRON RETROELEMENT organism=? DNA sequence DG(A1):DC(A27) DA(A2):DT(A26) DG(A3):DC(A25) DA(A4):DT(A24) DG(A5):DC(A23) DC(A6):DG(A22) DA(A7):DT(A21) DG(A8):DC(A20) DG(A9):DC(A19) DG(A10):DA(A18) DG(A11):DA(A17) DC(A12):DG(A16) chainD (242) PHE279 0 0 0 0 0 0 0 0 0 0 11 0 (244) PRO281 0 0 0 0 0 0 0 0 2 6 0 0 (302) THR339 0 0 0 0 0 0 0 2 0 0 0 0 (305) LYS342 0 0 0 0 0 0 1 0 0 0 0 0 (359) LYS396 2 0 0 0 0 0 0 0 0 0 0 0 (363) ASN400 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nlmeqilssdnlnraylqvvrnkgaegvdgmkytelkehlakngetikgqlrtrkykpqpgvptvtdrfiqqaiaqvltpiyeeqfhdhsygfrpnrcaqqailtalnimndgndwivdidlekffdtvnhdklmtligrtikdgdvisivrkylvsggnlspllanimlneldkemekrglnfvryaddciimvgsemsanrvmrnisrfieeklglkvnmtkskvdrpsglkylgfgfyFdPrahqfkakphaksvakfkkrmkeltcrswgvsnsykveklnqlirgwinyfkigsmkTlcKeldsriryrlrmciwkqwktpqnqeknlvklgidrntarrvaytgkriayvcnKgavNvaisnkrlasfglismldyyiekc >7uio_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Leucine_zipper_domain;Zn2/Cys6_DNA-binding_domain; title=MEDIATOR-PIC EARLY (COMPOSITE MODEL) organism=? DNA sequence DC(B4):DG(A38) DG(B5):DC(A37) DT(B6):DA(A36) DA(B7):DT(A35) DC(B8):DG(A34) DG(B9):DC(A33) DA(B10):DT(A32) DC(B11):DG(A31) DG(B12):DC(A30) DT(B13):DA(A29) DC(B14):DG(A28) DA(B15):DT(A27) DG(B16):DC(A26) DT(B17):DA(A25) DC(B18):DG(A24) DA(B19):DT(A23) DG(B20):DC(A22) DT(B21):DA(A21) DG(B23):DC(A19) DG(B24):DC(A18) DG(B25):DC(A17) DA(B26):DT(A16) DG(B27):DC(A15) DG(B28):DC(A14) DA(B29):DT(A13) DC(B30):DG(A12) DT(B31):DA(A11) DG(B32):DC(A10) DT(B33):DA(A9) DC(B34):DG(A8) DC(B35):DG(A7) DT(B36):DA(A6) DC(B37):DG(A5) DC(B38):DG(A4) DG(B39):DC(A3) DG(B40):DC(A2) chainA prot.sequence eqacdicrlkklkcskekpkcakclknnwecryspktkrspltrahltevesrlerleqlfllifpredldmilkmdslqdikalltglmvgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvkymvgqqyssaplrtvkevQFglfspeevraisvakirfpetmdetqtrakigglndprlgsidrnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelmrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklvgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafdvmideeslvky >7un7_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE LAMBDA IN COMPLEX WITH A 1NT MICROHOMOLOGY SUBSTRATE organism=? DNA sequence DA(T5):TTP(A601) DG(T6):DC(P6) DA(U8):DT(P4) DC(U9):DG(P3) DT(U10):DA(P2) DG(U11):DC(P1) chainA (135) ARG386 6 0 0 0 0 0 (166) SER417 8 0 0 0 0 0 (169) ARG420 3 0 0 0 0 0 (176) ASP427 7 0 0 0 0 0 (178) ASP429 6 0 0 0 0 0 (249) TYR505 6 9 0 0 0 0 (254) ALA510 7 0 0 0 0 0 (257) ASN513 5 0 0 0 0 0 (258) ARG514 25 0 0 0 0 0 (261) ARG517 9 6 0 0 0 0 (273) GLU529 0 8 0 0 0 0 prot.sequence hnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttQqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvkgetkylgvcrlpgpgrrhrrldiivvpysefacallYftgsahfnRsmRalaktkgmslsEhalstavvrnthgakvgpgrvlptptekdvfrllglpyrepaerdw >7unc_a:Histone-fold; title=POL II-DSIF-SPT6-PAF1C-TFIIS COMPLEX WITH REWRAPPED NUCLEOSOME organism=? DNA sequence DC(T-121):DG(N121) DT(T-120):DA(N120) DC(T-119):DG(N119) DA(T-118):DT(N118) DA(T-117):DT(N117) DT(T-116):DA(N116) DT(T-115):DA(N115) DG(T-114):DC(N114) DG(T-113):DC(N113) DT(T-112):DA(N112) DC(T-111):DG(N111) DG(T-110):DC(N110) DT(T-109):DA(N109) DA(T-108):DT(N108) DG(T-107):DC(N107) DA(T-106):DT(N106) DC(T-105):DG(N105) DA(T-104):DT(N104) DG(T-103):DC(N103) DC(T-102):DG(N102) DT(T-101):DA(N101) DC(T-100):DG(N100) DT(T-99):DA(N99) DA(T-98):DT(N98) DG(T-97):DC(N97) DC(T-96):DG(N96) DA(T-95):DT(N95) DC(T-94):DG(N94) DC(T-93):DG(N93) DG(T-92):DC(N92) DC(T-91):DG(N91) DT(T-90):DA(N90) DT(T-89):DA(N89) DA(T-88):DT(N88) DA(T-87):DT(N87) DA(T-86):DT(N86) DC(T-85):DG(N85) DG(T-84):DC(N84) DC(T-83):DG(N83) DA(T-82):DT(N82) DC(T-81):DG(N81) DG(T-80):DC(N80) DT(T-79):DA(N79) DA(T-78):DT(N78) DC(T-77):DG(N77) DG(T-76):DC(N76) DC(T-75):DG(N75) DG(T-74):DC(N74) DC(T-73):DG(N73) DT(T-72):DA(N72) DG(T-71):DC(N71) DT(T-70):DA(N70) DC(T-69):DG(N69) DC(T-68):DG(N68) DC(T-67):DG(N67) DC(T-66):DG(N66) DT(T-65):DA(N65) DT(T-64):DA(N64) DC(T-63):DG(N63) DG(T-62):DC(N62) DA(T-61):DT(N61) DA(T-60):DT(N60) DA(T-59):DT(N59) DA(T-58):DT(N58) DA(T-57):DT(N57) DA(T-56):DT(N41) DC(T-40):DG(N40) DA(T-39):DT(N39) DC(T-38):DG(N38) DC(T-37):DG(N37) DC(T-36):DG(N36) DA(T-35):DT(N35) DA(T-34):DT(N34) DG(T-33):DC(N33) DA(T-32):DT(N32) DC(T-31):DG(N31) DA(T-30):DT(N30) DC(T-29):DG(N29) DC(T-28):DG(N28) DA(T-27):DT(N27) DG(T-26):DC(N26) DG(T-25):DC(N25) DC(T-24):DG(N24) DA(T-23):DT(N23) DC(T-22):DG(N22) DG(T-21):DC(N21) DA(T-20):DT(N20) DG(T-19):DC(N19) DA(T-18):DT(N18) DC(T-17):DG(N17) DA(T-16):DT(N16) DG(T-15):DC(N15) DA(T-14):DT(N14) DA(T-13):DT(N13) DA(T-12):DT(N12) DA(T-11):DT(N11) DA(T-10):DT(N10) DA(T-9):DT(N9) DA(T-8):DT(N8) DC(T-7):DG(N7) DA(T-6):DT(N6) DA(T-5):DT(N5) DC(T-4):DG(N4) DG(T-3):DC(N3) DA(T-2):DT(N2) DA(T-1):DT(N1) DA(T0):DT(N0) DA(T1):DT(N-1) DC(T2):DG(N-2) DG(T3):DC(N-3) DG(T4):DC(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DA(T7):DT(N-7) DC(T8):DG(N-8) DC(T9):DG(N-9) DA(T10):DT(N-10) DC(T11):DG(N-11) DC(T12):DG(N-12) DC(T13):DG(N-13) DA(T14):DT(N-14) DG(T15):DC(N-15) DA(T16):DT(N-16) DC(T17):DG(N-17) DA(T18):DT(N-18) DC(T19):DG(N-19) DA(T20):DT(N-20) DC(T21):DG(N-21) DC(T22):DG(N-22) DA(T23):DT(N-23) DA(T24):DT(N-24) DA(T25):DT(N-25) DC(T26):DG(N-26) DA(T27):DT(N-27) DC(T28):DG(N-28) DA(T29):DT(N-29) DA(T30):DT(N-30) DG(T31):DC(N-31) DA(T32):DT(N-32) DC(T33):DG(N-33) chaina ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >7und_e:Histone-fold; title=POL II-DSIF-SPT6-PAF1C-TFIIS-NUCLEOSOME COMPLEX (STALLED AT +38) organism=? DNA sequence DT(N14):DG(T-26) DC(N15):DA(T-27) DT(N16):DC(T-28) DG(N17):DC(T-29) DC(N19):DA(T-30) DT(N20):DC(T-31) DC(N21):DA(T-32) DG(N22):DG(T-33) DT(N23):DA(T-34) DG(N24):DA(T-35) DC(N25):DC(T-36) DC(N26):DC(T-37) DT(N27):DC(T-38) DT(N39):DA(T-39) DG(N40):DC(T-40) DT(N41):DA(T-41) DT(N42):DA(T-42) DT(N43):DA(T-43) DT(N44):DA(T-44) DC(N45):DG(T-45) DC(N46):DG(T-46) DC(N47):DG(T-47) DC(N48):DG(T-48) DT(N50):DA(T-49) DG(N51):DC(T-51) DG(N52):DC(T-52) DC(N53):DG(T-53) DG(N54):DC(T-54) DG(N55):DC(T-55) DT(N56):DA(T-56) DT(N57):DA(T-57) DT(N58):DA(T-58) DT(N59):DA(T-59) DT(N61):DA(T-60) DC(N62):DG(T-62) DG(N63):DC(T-63) DA(N64):DT(T-64) DA(N65):DT(T-65) DG(N66):DC(T-66) DG(N67):DC(T-67) DG(N68):DC(T-68) DG(N69):DC(T-69) DA(N70):DT(T-70) DC(N71):DG(T-71) DA(N72):DT(T-72) DG(N73):DC(T-73) DC(N74):DG(T-74) DG(N75):DC(T-75) DC(N76):DG(T-76) DG(N77):DC(T-77) DT(N78):DA(T-78) DA(N79):DT(T-79) DC(N80):DG(T-80) DG(N81):DC(T-81) DT(N82):DA(T-82) DG(N83):DC(T-83) DC(N84):DG(T-84) DG(N85):DC(T-85) DT(N86):DA(T-86) DT(N87):DA(T-87) DT(N88):DA(T-88) DA(N89):DT(T-89) DA(N90):DT(T-90) DG(N91):DC(T-91) DC(N92):DG(T-92) DG(N93):DC(T-93) DG(N94):DC(T-94) DT(N95):DA(T-95) DG(N96):DC(T-96) DC(N97):DG(T-97) DT(N98):DA(T-98) DA(N99):DT(T-99) DG(N100):DC(T-100) DA(N101):DT(T-101) DG(N102):DC(T-102) DC(N103):DG(T-103) DT(N104):DA(T-104) DG(N105):DC(T-105) DT(N106):DA(T-106) DC(N107):DG(T-107) DT(N108):DA(T-108) DA(N109):DT(T-109) DC(N110):DG(T-110) DG(N111):DC(T-111) DA(N112):DT(T-112) DC(N113):DG(T-113) DC(N114):DG(T-114) DA(N115):DT(T-115) DA(N116):DT(T-116) DT(N117):DA(T-117) DT(N118):DA(T-118) DG(N119):DC(T-119) DA(N120):DT(T-120) DG(N121):DC(T-121) DC(N122):DG(T-122) DG(N123):DC(T-123) DG(N124):DC(T-124) DC(N125):DG(T-125) DC(N126):DG(T-126) DT(N127):DA(T-127) DC(N128):DG(T-128) DG(N129):DC(T-129) DG(N130):DC(T-130) DC(N131):DG(T-131) DA(N132):DT(T-132) DC(N133):DG(T-133) DC(N134):DG(T-134) DG(N135):DC(T-135) DG(N136):DC(T-136) DG(N137):DC(T-137) DA(N138):DT(T-138) DT(N139):DA(T-139) DT(N140):DA(T-140) DC(N141):DG(T-141) DT(N142):DA(T-142) DG(N143):DC(T-143) DA(N144):DT(T-144) chaine ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >7uog_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND ASYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE. organism=Escherichia coli K-12 DNA sequence DC(A2):DG(B42) DT(A3):DA(B41) DG(A4):DC(B40) DT(A5):DA(B39) DG(A6):DC(B38) DA(A7):DT(B37) DC(A8):DG(B36) DA(A9):DT(B35) DA(A10):DT(B34) DA(A11):DT(B33) DT(A12):DA(B32) DT(A13):DA(B31) DG(A14):DC(B30) DC(A15):DG(B29) DC(A16):DG(B28) DC(A17):DG(B27) DT(A18):DA(B26) DC(A19):DG(B25) DA(A20):DT(B24) DG(A21):DC(B23) DA(A22):DT(B22) DC(A23):DG(B21) DC(A24):DG(B20) DC(A25):DG(B19) DG(A26):DC(B18) DC(A27):DG(B17) DC(A28):DG(B16) DT(A29):DA(B15) DT(A30):DA(B14) chainC ( 56) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 0 0 0 (166) SER197 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) TYR198 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ARG200 0 3 7 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) PRO202 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ASP203 0 0 0 1 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG206 0 0 0 12 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ARG207 0 0 0 0 0 5 16 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ARG233 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffilqnrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >7upz_A:Leucine_zipper_domain; title=STRUCTURAL BASIS FOR CELL TYPE SPECIFIC DNA BINDING OF C/EBPBETA: THE CASE OF CELL CYCLE INHIBITOR P15INK4B PROMOTER organism=Homo sapiens DNA sequence DC(D2):DG(C16) DG(D3):DC(C15) DT(D4):DA(C14) DC(D5):DG(C13) DT(D6):DA(C12) DT(D7):DA(C11) DT(D8):DA(C10) DC(D9):DG(C9) DT(D10):DA(C8) DT(D11):DA(C7) DA(D12):DT(C6) DA(D13):DT(C5) DG(D14):DC(C4) DA(D15):DT(C3) DA(D16):DT(C2) chainA ( 10) ARG278 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 ( 13) ASN281 0 0 0 1 6 7 2 0 0 0 0 0 0 0 0 ( 14) ASN282 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 16) ALA284 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 17) VAL285 0 0 0 0 2 4 2 0 0 0 0 0 0 0 0 ( 20) SER288 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 21) ARG289 0 0 0 0 0 0 5 14 11 0 0 0 0 0 0 prot.sequence khsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk >7upz_AB:Leucine_zipper_domain; title=STRUCTURAL BASIS FOR CELL TYPE SPECIFIC DNA BINDING OF C/EBPBETA: THE CASE OF CELL CYCLE INHIBITOR P15INK4B PROMOTER organism=Homo sapiens DNA sequence DT(C2):DA(D16) DT(C3):DA(D15) DC(C4):DG(D14) DT(C5):DA(D13) DT(C6):DA(D12) DA(C7):DT(D11) DA(C8):DT(D10) DG(C9):DC(D9) DA(C10):DT(D8) DA(C11):DT(D7) DA(C12):DT(D6) DG(C13):DC(D5) DA(C14):DT(D4) DC(C15):DG(D3) DG(C16):DC(D2) chainA ( 10) ARG278 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 ( 13) ASN281 0 0 0 0 0 0 0 0 2 7 6 1 0 0 0 ( 14) ASN282 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 16) ALA284 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 17) VAL285 0 0 0 0 0 0 0 0 2 4 2 0 0 0 0 ( 20) SER288 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 21) ARG289 0 0 0 0 0 0 11 14 5 0 0 0 0 0 0 chainB ( 11) ARG278 0 0 0 0 4 12 0 0 0 0 0 0 0 0 0 ( 14) ASN281 0 0 3 7 6 2 0 0 0 0 0 0 0 0 0 ( 15) ASN282 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 17) ALA284 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 18) VAL285 0 0 0 2 4 4 3 0 0 0 0 0 0 0 0 ( 21) SER288 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 ( 22) ARG289 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence khsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfk/dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkqlp >7ur0_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SCAFFOLD-INSERT DUPLEXES (21MER AND 10MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL T-A RICH SEQUENCE, RESPECTIVELY. organism=Escherichia coli K-12 DNA sequence DC(A2):DG(B42) DT(A3):DA(B41) DG(A4):DC(B40) DT(A5):DA(B39) DG(A6):DC(B38) DA(A7):DT(B37) DC(A8):DG(B36) DA(A9):DT(B35) DA(A10):DT(B34) DA(A11):DT(B33) DT(A12):DA(B32) DT(A13):DA(B31) DG(A14):DC(B30) DC(A15):DG(B29) DC(A16):DG(B28) DC(A17):DG(B27) DT(A18):DA(B26) DC(A19):DG(B25) DA(A20):DT(B24) DG(E21):DC(B23) DA(E22):DT(B22) DC(E23):DG(F21) DG(E24):DC(F20) DG(E25):DC(F19) DT(E26):DA(F18) DA(E27):DT(F17) DA(E28):DT(F16) DT(E29):DA(F15) DT(E30):DA(F14) chainC ( 56) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 (164) SER197 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) TYR198 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ARG200 0 3 9 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) PRO202 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ASP203 0 0 0 1 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG206 0 0 0 15 16 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG207 0 0 0 0 0 5 17 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgrqtthivfsfrdi >7usf_D:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase;N-terminal_Zn_binding_domain_of_HIV_integrase; title=MOUSE MAMMARY TUMOR VIRUS STRAND TRANSFER COMPLEX INTASOME organism=? DNA sequence DA(I1) DA(I2) DT(I3) DG(I4) DC(I5) DC(I6) DG(I7) DC(I8) DA(I9) DG(I10) DT(I11) DC(I12) DG(I13) DG(I14) DC(I15) DC(I16) DG(I17) DA(I18) DC(I19) DC(I20) DT(I21) DG(I22) chainD (206) ARG240 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) TYR242 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) TRP255 0 58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lesaqeshalhhqnaaalrfqfhitreqareivklcpncplkprvlwqmdvthvsefgklkyvhvtvdtyshftfatartgeatkdvlqhlaqsfaymgipqkiktdnapayvsrsiqeflarwkishvqaiverthqnikaqlnklqkyytphhllahalfvlnhvnmdnqghtaaerhwgpmvmwkdlltgswkgpdvlitagRgYacvfpqdaespiWvpdrfirpfterke >7ut1_ABG:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase;N-terminal_Zn_binding_domain_of_HIV_integrase; title=HIGHER-ORDER ASSEMBLY OF MULTIPLE MMTV STRAND TRANSFER COMPLEX INTASOMES organism=? DNA sequence DG(I4):DC(J19) DC(I6):DG(J17) DG(I7):DC(J16) DC(I8):DG(J15) DA(I9):DT(J14) DG(I10):DC(J13) DT(I11):DA(J12) DC(I12):DG(J11) DG(I13):DC(J10) DG(I14):DC(J9) DC(I15):DG(J8) DC(I16):DG(J7) DG(I17):DC(J6) DA(I18):DT(J5) DC(I19):DG(J4) DC(I20):DG(J3) DT(I21):DA(J2) DG(I22):DC(J1) chainA (152) GLN152 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ALA155 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) GLU158 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) ARG159 0 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG240 0 20 8 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainG (230) ARG259 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alesaqeshalhhqnaaalrfqfhitreqareivklcpncpdwghapqlgvnprglkprvlwqmdvthvsefgklkyvhvtvdtyshftfatartgeatkdvlqhlaqsfaymgipqkiktdnapayvsrsiqeflarwkishvtgipynpQgqAivERthqnikaqlnklqkagkyytphhllahalfvlnhvnmdnqghtaaerhwgpisadpkpmvmwkdlltgswkgpdvlitagRgyacvfpqdaespiwvpdrfirpf/alesaqeshalhhqnaaalrfqfhitreqareivklcpncpglkprvlwqmdvthvsefgklkyvhvtvdtyshftfatartgeatkdvlqhlaqsfaymgipqkiktdnapayvsrsiqeflarwkishvaiverthqnikaqlnklqkaGkyYtpHHllahalfvlnhvnmdnqghtaaerhwgpisadpkpmvmwkdlltgswkgpdvlitagrgyacvfpqdaespiwvpdrfirPft/alesaqeshalhhqnaaalrfqfhitreqareivklcpncprglkprvlwqmdvthvsefgklkyvhvtvdtyshftfatartgeatkdvlqhlaqsfaymgipqkiktdnapayvsrsiqeflarwkishvaiverthqnikaqlnklqkagkyytphhllahalfvlnhvnmdnqghtaaerhwgpmvmwkdlltgswkgpdvlitagrgyacvfpqdaespiwvpdRfirpf >7ut1_CE:Ribonuclease_H-like;DNA-binding_domain_of_retroviral_integrase;N-terminal_Zn_binding_domain_of_HIV_integrase; title=HIGHER-ORDER ASSEMBLY OF MULTIPLE MMTV STRAND TRANSFER COMPLEX INTASOMES organism=? DNA sequence DC(M1):DG(L22) DA(M2):DT(L21) DG(M3):DC(L20) DG(M4):DC(L19) DT(M5):DA(L18) DC(M6):DG(L17) DG(M7):DC(L16) DG(M8):DC(L15) DC(M9):DG(L14) DC(M10):DG(L13) DG(M11):DC(L12) DA(M12):DT(L11) DC(M13):DG(L10) DT(M14):DA(L9) DG(M15):DC(L8) DC(M16):DG(L7) DG(M17):DC(L6) DG(M18):DC(L5) DC(M19):DG(L4) chainC chainE (152) GLN152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (155) ALA155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (158) GLU158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (159) ARG159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 5 0 (162) GLN162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 15 (240) ARG240 0 0 0 0 0 0 0 0 0 0 0 0 0 24 12 7 0 0 0 prot.sequence pmvmwkdlltgswkgpdvlitagrgyacvfpqdaespiwvpdrfirpf/alesaqeshalhhqnaaalrfqfhitreqareivklcpncpdwghapqlgvnprglkprvlwqmdvthvsefgklkyvhvtvdtyshftfatartgeatkdvlqhlaqsfaymgipqkiktdnapayvsrsiqeflarwkishvtgipynpQgqAivERthQnikaqlnklqkagkyytphhllahalfvlnhvnmdnqghtaaerhwgpisadpkpmvmwkdlltgswkgpdvlitagRgyacvfpqdaespiwvpdrfirpft >7utn_D:Ribonuclease_H-like; title=ISCB AND WRNA BOUND TO TARGET DNA organism=SYNTHETIC CONSTRUCT DNA sequence DC(A5):DG(B128) DC(A6):DG(B127) DT(A7):DA(B126) DC(A8):DG(B125) DG(A9):DC(B124) DA(A10):DT(B123) DC(A11):DG(B122) DT(A12):DA(B121) DT(A13):DA(B120) DC(A14):DG(B119) DT(A15):DA(B118) DA(A16):DT(B117) DG(A17):DC(B116) chainD (282) HIS379 0 0 0 0 0 0 0 0 0 0 0 7 5 (283) LYS380 0 0 0 0 0 0 0 0 0 0 1 7 3 (360) ARG457 0 0 0 0 0 0 0 0 0 0 0 3 0 (362) GLU459 0 0 0 0 0 0 0 0 1 3 1 3 0 (364) ARG461 0 0 0 0 0 0 0 0 0 0 1 0 0 (365) ASN462 0 0 0 0 0 0 1 0 0 0 0 0 0 (370) ASN467 0 0 0 0 0 0 0 3 0 0 0 0 0 (371) TYR468 0 0 0 0 0 0 0 5 2 0 0 0 0 (379) LYS476 0 0 0 0 0 0 0 0 1 0 0 0 0 (381) TRP478 0 0 0 0 0 0 1 2 0 0 0 0 0 prot.sequence mavvyvisksgkplmpttrcghvrillkegkarvverkpftiqltyesaeetqplvlgidpgrtnigmsvvtesgesvfnaqietrnkdvpklmkdrkqyrmahrrlkrrckrrrrakaagtafeegekqrllpgcfkpitcksirnkearfnnrkrpvgwltptanhllvthlnvvkkvqkilpvakvvlelnrfsfmsvlnqiipyladqladmfpgnfcvtsgqdtylfreehgipkdhyldayciacsaltdakkvsspkgrpymvhqfrrhdrqacHKanlnrsyymggklvatnrhkamdqktdsleeyraahsaadvskltvkhpsaqykdmsrimpgsilvsgegklftlsRsEgRNkgqvNYfvstegiKyWarkcqylrnngglqiy >7utt_A: title=STRUCTURE OF NON-HYDROLYZABLE ATP (APCPP) BINDS TO CYCLIC GMP AMP SYNTHASE (CGAS) THROUGH MN COORDINATION organism=? DNA sequence DA(E1):DT(F18) DT(E2):DA(F17) DC(E3):DG(F16) DT(E4):DA(F15) DG(E5):DC(F14) DT(E6):DA(F13) DA(E7):DT(F12) DC(E8):DG(F11) DA(E9):DT(F10) DT(E10):DA(F9) DG(E11):DC(F8) DT(E12):DA(F7) DA(E13):DT(F6) DC(E14):DG(F5) DA(E15):DT(F4) DG(E16):DC(F3) DA(E17):DT(F2) DT(E18):DA(F1) chainA ( 13) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 12 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvknplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdk >7uux_A: title=ATP BINDS TO CYCLIC GMP AMP SYNTHASE (CGAS) THROUGH MG COORDINATION organism=? DNA sequence DA(E1):DT(F18) DT(E2):DA(F17) DC(E3):DG(F16) DT(E4):DA(F15) DG(E5):DC(F14) DT(E6):DA(F13) DA(E7):DT(F12) DC(E8):DG(F11) DA(E9):DT(F10) DT(E10):DA(F9) DG(E11):DC(F8) DT(E12):DA(F7) DA(E13):DT(F6) DC(E14):DG(F5) DA(E15):DT(F4) DG(E16):DC(F3) DA(E17):DT(F2) DT(E18):DA(F1) chainA ( 13) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 10 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnqfnvmfklevprielqeyyetgafylvkfnplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdkl >7uv6_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SCAFFOLD DUPLEX (21MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN INSERT DUPLEX (10MER) WITH GUEST TAMRA- LABELLED THYMINE AND G-C RICH SEQUENCE. organism=Escherichia coli K-12 DNA sequence DC(F14):DG(E30) DC(F15):DG(E29) DG(F16):DC(E28) DG(F17):DC(E27) DG(F18):DC(E26) DC(F19):DG(E25) DC(F20):DG(E24) DG(F21):DC(E23) DT(B22):DA(E22) DC(B23):DG(E21) DT(B24):DA(A20) DG(B25):DC(A19) DA(B26):DT(A18) DG(B27):DC(A17) DG(B28):DC(A16) DG(B29):DC(A15) DC(B30):DG(A14) DA(B31):DT(A13) DA(B32):DT(A12) DT(B33):DA(A11) DT(B34):DA(A10) DT(B35):DA(A9) DG(B36):DC(A8) DT(B37):DA(A7) DC(B38):DG(A6) DA(B39):DT(A5) DC(B40):DG(A4) DA(B41):DT(A3) DG(B42):DC(A2) chainC ( 56) SER75 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) SER79 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG124 0 0 0 0 0 0 0 0 0 6 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (165) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (167) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 7 3 0 (169) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 (170) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 1 0 0 0 (173) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 11 0 0 0 (174) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 17 5 0 0 0 0 0 prot.sequence nsprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffinrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgrqtthivfsfrdit >7uv7_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SCAFFOLD DUPLEX (21MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN INSERT DUPLEX (10MER) WITH GUEST TAMRA- LABELLED THYMINE AND T-A RICH SEQUENCE. organism=Escherichia coli K-12 DNA sequence DC(A2):DG(B42) DT(A3):DA(B41) DG(A4):DC(B40) DT(A5):DA(B39) DG(A6):DC(B38) DA(A7):DT(B37) DC(A8):DG(B36) DA(A9):DT(B35) DA(A10):DT(B34) DA(A11):DT(B33) DT(A12):DA(B32) DT(A13):DA(B31) DG(A14):DC(B30) DC(A15):DG(B29) DC(A16):DG(B28) DC(A17):DG(B27) DT(A18):DA(B26) DC(A19):DG(B25) DA(A20):DT(B24) DG(E21):DC(B23) DA(E22):DT(B22) DC(E23):DG(F21) DG(E24):DC(F20) DG(E25):DC(F19) DT(E26):DA(F18) DA(E27):DT(F17) DA(E28):DT(F16) DT(E29):DA(F15) DT(E30):DA(F14) chainC ( 56) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 (164) SER197 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) TYR198 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ARG200 0 1 9 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) PRO202 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ASP203 0 0 0 1 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG206 0 0 0 10 15 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG207 0 0 0 0 0 5 16 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgrqtthivfsfrdi >7uwe_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E. COLI TRANSCRIPTION-COUPLED RIBONUCLEOTIDE EXCISION REPAIR (TC-RER) COMPLEX organism=? DNA sequence DG(A1):DC(B23) DG(A2):DC(B22) DG(A3):DT(B21) DC(A4):DC(B20) DT(A5):DT(B19) DA(A6):DC(B18) DC(A13):DC(B17) DA(A14):DA(B16) DT(A15):DT(B15) DG(A16):DG(B14) DA(A17):DT(B13) DC(A18):DG(B12) DG(A19):DC(B11) DG(A20):DC(B10) DC(A21):DG(B9) DG(A22):DC(B8) DA(A23):DT(B7) DA(A24):DT(B6) DT(A25):DA(B5) DA(A26):DT(B4) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >7uwe_IJ: title=CRYOEM STRUCTURE OF E. COLI TRANSCRIPTION-COUPLED RIBONUCLEOTIDE EXCISION REPAIR (TC-RER) COMPLEX organism=? DNA sequence DG(A1):DC(B23) DG(A2):DC(B22) DG(A3):DT(B21) DC(A4):DC(B20) DT(A5):DT(B19) DA(A6):DC(B18) DC(A13):DC(B17) DA(A14):DA(B16) DT(A15):DT(B15) DG(A16):DG(B14) DA(A17):DT(B13) DC(A18):DG(B12) DG(A19):DC(B11) DG(A20):DC(B10) DC(A21):DG(B9) DG(A22):DC(B8) DA(A23):DT(B7) DA(A24):DT(B6) DT(A25):DA(B5) DA(A26):DT(B4) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 chainJ ( 27) GLU42 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) LEU255 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ALA261 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpEtinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfAtsdlndlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7uwh_CIJ: title=CRYOEM STRUCTURE OF E. COLI TRANSCRIPTION-COUPLED RIBONUCLEOTIDE EXCISION REPAIR (TC-RER) COMPLEX BOUND TO RIBONUCLEOTIDE SUBSTRATE organism=? DNA sequence DG(A1) DG(A2) DG(A3) DC(A4) DT(A5) DA(A6) DC(A13) DA(A14) DT(A15) DG(A16) DA(A17) DC(A18) DG(A19) DG(A20) DC(A21) DG(A22) DA(A23) DA(A24) DT(A25) DA(A26) DC(A27) DC(A28) DC(A29) DT(A30) DC(A31) DC(A32) DC(A33) DA(A34) DG(A35) DG(A36) DC(A37) DC(A38) chainC (158) PRO166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 chainI (150) ARG151 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 27) GLU42 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG47 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1119) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 prot.sequence tqlvagvdavgrgplvgavvtaavildparpiaglndskklsekrrlalyeeikekalswslgraepheidelnilhatmlamqravaglhiapeyvlidgnrcpklpmpamavvkgdsrvpeisaasilakvtrdaemaaldivfpqygfaqhkgyPtafhleklaehgatehhrrsfgpvkralglas/vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpEtinyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7uwh_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E. COLI TRANSCRIPTION-COUPLED RIBONUCLEOTIDE EXCISION REPAIR (TC-RER) COMPLEX BOUND TO RIBONUCLEOTIDE SUBSTRATE organism=? DNA sequence DG(A1) DG(A2) DG(A3) DC(A4) DT(A5) DA(A6) DC(A13) DA(A14) DT(A15) DG(A16) DA(A17) DC(A18) DG(A19) DG(A20) DC(A21) DG(A22) DA(A23) DA(A24) DT(A25) DA(A26) DC(A27) DC(A28) DC(A29) DT(A30) DC(A31) DC(A32) DC(A33) DA(A34) DG(A35) DG(A36) DC(A37) DC(A38) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >7uxw_C: title=STRUCTURE OF ATP AND GTP BIND TO CYCLIC GMP AMP SYNTHASE (CGAS) THROUGH MG COORDINATION organism=? DNA sequence DA(J1):DT(I18) DT(J2):DA(I17) DC(J3):DG(I16) DT(J4):DA(I15) DG(J5):DC(I14) DT(J6):DA(I13) DA(J7):DT(I12) DC(J8):DG(I11) DA(J9):DT(I10) DT(J10):DA(I9) DG(J11):DC(I8) DT(J12):DA(I7) DA(J13):DT(I6) DC(J14):DG(I5) DA(J15):DT(I4) DG(J16):DC(I3) DA(J17):DT(I2) DT(J18):DA(I1) chainC ( 13) ARG161 0 0 0 0 0 1 4 7 0 0 0 0 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnqfnvmfklevprielqeyyetgafylvkfnplshflgvlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknaqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdkl >7uxy_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF PROTEIN VARIANT REPLICATION INITIATOR PROTEIN REPE54 (L53G,Q54G,E55G) AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE. organism=Escherichia coli K-12 DNA sequence DC(A3):DG(B33) DC(A4):DG(B32) DG(A5):DC(B31) DG(A6):DC(B30) DA(A7):DT(B29) DC(A8):DG(B28) DC(A9):DG(B27) DT(A10):DA(B26) DG(A11):DC(B25) DT(A12):DA(B24) DG(A13):DC(B23) DA(A14):DT(B22) DC(A15):DG(B21) DA(A16):DT(B20) DA(A17):DT(B19) DA(A18):DT(B18) DT(A19):DA(B17) DT(A20):DA(B16) DG(A21):DC(B15) DC(A22):DG(B14) DC(A23):DG(B13) DC(A24):DG(B12) DT(A25):DA(B11) DC(A26):DG(B10) DA(A27):DT(B9) DG(A28):DC(B8) DA(A29):DT(B7) DC(A30):DG(B6) DG(A31):DC(B5) DG(A32):DC(B4) chainC ( 57) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 58) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 59) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 ( 61) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 62) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 ( 65) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 95) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 4 0 0 0 0 (165) SER197 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) TYR198 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG200 0 0 0 0 0 0 0 2 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) PRO202 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ASP203 0 0 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG206 0 0 0 0 0 0 0 0 0 13 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) ARG207 0 0 0 0 0 0 0 0 0 0 0 5 17 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) ARG233 0 0 0 2 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsprivqsndlteaayslsrdqkrmlylfvdqirksdhdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >7uy5_AD: title=TETRAHYMENA TELOMERASE WITH CST organism=? DNA sequence DG(C17) DG(C18) DG(C19) DT(C20) DT(C21) DG(C22) DG(C23) DG(C24) DG(C25) DT(C26) DT(C27) DG(C28) DG(C29) DG(C30) chainA (339) PHE414 0 0 0 0 0 0 0 0 0 22 0 0 0 0 (484) LEU559 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (488) GLN563 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (491) MET566 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (828) ASN926 0 0 0 0 0 0 0 0 0 0 2 0 0 0 chainD ( 78) ARG588 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) MET601 0 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) PHE603 22 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) GLN605 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS660 0 2 8 0 0 0 0 0 0 0 0 0 0 0 (152) PHE662 0 0 39 0 0 0 0 0 0 0 0 0 0 0 (157) GLU667 0 0 10 0 0 0 0 0 0 0 0 0 0 0 (159) ALA669 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU673 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kqmltrkedlltvlkqisalkyvsnlyefllatekivqtseldtqfqefltttiiaseqnlvenykqkynqpnfsqltikqviddsiillgnkqnyvqqigtttigfyveyeninlsrqtlyssnfrnllnifgeedfkyflidflvftkveqngylqvagvclnqyfsenqyiypeiqrsqifycnhmgrepgvfkssffnysepqtiikktllkeyqsknfscqeerdlfleftekivqnfhninfnyllkkfcklpenyqslksqvkqivqsenkanqqscenlfnslydteisykqitnflrqiiqncvpnqllgkknfkvfleklyefvqmkrFenqkvldyicfmdvfdvewfvdlknqkftqkrkyisdkrkilgdlivfiinkivipvlrynfyitekhkegsqifyyrkpiwklvskltivkleeenlekveeklipedsfqkypqgklriipkkgsfrpimtflrkdkqknikLnlnQilMdsqlvfrnlkdmlgqkigysvfdnkqisekfaqfiekwknkgrpqlyyvtldikkcydsidqmkllnffnqsdliqdtyfinkyllfqrnkrpllqimdninfpyyfnlkerqiayslyddddqilqkgfkeiqsddrpfivinqdkprcitkdiihnhlkhisqynvisfnkvkfrqkrgipqglnisgvlcsfyfgkleeeytqflknaeqvngsinllmrltddylfisdsqqnalnlivqlqncannngfmfndqkittnfqfpqedynlehfkisvqnecqwigksidmntleiksiqkqtqqeinqtinvaisiknlksqlknklrslflNqlidyfnpninsfeglcrqlyhhskatvmkfypfmtklfqidlkkskqysvqygkentnenflkdilyytvedvckilcylqfedeinsnikeifknlyswimwdiivsylkkkkqfkgylnkllqkirksrffylkegckslqlilsqqkyqlnkkeleaiefidlnnliqdiktlipkisak/qriyssieeiiqqaqaseigqkkefyvygnlvsiqmknklyyyrctcqgksvlkyhgdsffcescqqfinpqvhlmlRafvqdstgtipvMiFdQqssqlinqidpsihvqeagqyvknciengqeeiirqlfskldfarfifeiqfenKeFnneqEiAykvLkiekenikeeskyllkklehlinn >7uy5_D:Nucleic_acid-binding_proteins; title=TETRAHYMENA TELOMERASE WITH CST organism=? DNA sequence DG(C17) DG(C18) DG(C19) DT(C20) DT(C21) DG(C22) DG(C23) DG(C24) DG(C25) DT(C26) DT(C27) DG(C28) DG(C29) DG(C30) chainD ( 78) ARG588 0 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) MET601 0 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) PHE603 22 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) GLN605 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS660 0 2 8 0 0 0 0 0 0 0 0 0 0 0 (152) PHE662 0 0 39 0 0 0 0 0 0 0 0 0 0 0 (157) GLU667 0 0 10 0 0 0 0 0 0 0 0 0 0 0 (159) ALA669 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU673 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qriyssieeiiqqaqaseigqkkefyvygnlvsiqmknklyyyrctcqgksvlkyhgdsffcescqqfinpqvhlmlRafvqdstgtipvMiFdQqssqlinqidpsihvqeagqyvknciengqeeiirqlfskldfarfifeiqfenKeFnneqEiAykvLkiekenikeeskyllkklehlinn >7uy6_AD:Nucleic_acid-binding_proteins; title=TETRAHYMENA TELOMERASE AT 2.9 ANGSTROM RESOLUTION organism=? DNA sequence DG(C47) DG(C48) DG(C49) DT(C50) DT(C51) DG(C52) DG(C53) DG(C54) DG(C55) DT(C56) DT(C57) DG(C58) DG(C59) DG(C60) chainA (339) PHE414 0 0 0 0 0 0 0 0 0 29 0 0 0 0 (484) LEU559 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (488) GLN563 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (828) ASN926 0 0 0 0 0 0 0 0 0 0 3 0 0 0 chainD ( 91) MET601 0 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) PHE603 39 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS660 0 5 8 0 0 0 0 0 0 0 0 0 0 0 (152) PHE662 0 0 46 0 0 0 0 0 0 0 0 0 0 0 (157) GLU667 0 2 5 0 0 0 0 0 0 0 0 0 0 0 (159) ALA669 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (161) LYS671 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU673 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kqmltrkedlltvlkqisalkyvsnlyefllatekivqtseldtqfqefltttiiaseqnlvenykqkynqpnfsqltikqviddsiillgnkqnyvqqigtttigfyveyeninlsrqtlyssnfrnllnifgeedfkyflidflvftkveqngylqvagvclnqyfsenqyiypeiqrsqifycnhmgrepgvfkssffnysepqtiikktllkeyqsknfscqeerdlfleftekivqnfhninfnyllkkfcklpenyqslksqvkqivqsenkanqqscenlfnslydteisykqitnflrqiiqncvpnqllgkknfkvfleklyefvqmkrFenqkvldyicfmdvfdvewfvdlknqkftqkrkyisdkrkilgdlivfiinkivipvlrynfyitekhkegsqifyyrkpiwklvskltivkleeenlekveeklipedsfqkypqgklriipkkgsfrpimtflrkdkqknikLnlnQilmdsqlvfrnlkdmlgqkigysvfdnkqisekfaqfiekwknkgrpqlyyvtldikkcydsidqmkllnffnqsdliqdtyfinkyllfqrnkrpllqimdninfpyyfnlkerqiayslyddddqilqkgfkeiqsddrpfivinqdkprcitkdiihnhlkhisqynvisfnkvkfrqkrgipqglnisgvlcsfyfgkleeeytqflknaeqvngsinllmrltddylfisdsqqnalnlivqlqncannngfmfndqkittnfqfpqedynlehfkisvqnecqwigksidmntleiksiqkqtqqeinqtinvaisiknlksqlknklrslflNqlidyfnpninsfeglcrqlyhhskatvmkfypfmtklfqidlkkskqysvqygkentnenflkdilyytvedvckilcylqfedeinsnikeifknlyswimwdiivsylkkkkqfkgylnkllqkirksrffylkegckslqlilsqqkyqlnkkeleaiefidlnnliqdiktlipkisak/qriyssieeiiqqaqaseigqkkefyvygnlvsiqmknklyyyrctcqgksvlkyhgdsffcescqqfinpqvhlmlrafvqdstgtipvMiFdqqssqlinqidpsihvqeagqyvknciengqeeiirqlfskldfarfifeiqfenKeFnneqEiAyKvLkiekenikeeskyllkklehlinn >7uy6_D:Nucleic_acid-binding_proteins; title=TETRAHYMENA TELOMERASE AT 2.9 ANGSTROM RESOLUTION organism=? DNA sequence DG(C47) DG(C48) DG(C49) DT(C50) DT(C51) DG(C52) DG(C53) DG(C54) DG(C55) DT(C56) DT(C57) DG(C58) DG(C59) DG(C60) chainD ( 91) MET601 0 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) PHE603 39 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS660 0 5 8 0 0 0 0 0 0 0 0 0 0 0 (152) PHE662 0 0 46 0 0 0 0 0 0 0 0 0 0 0 (157) GLU667 0 2 5 0 0 0 0 0 0 0 0 0 0 0 (159) ALA669 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (161) LYS671 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU673 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qriyssieeiiqqaqaseigqkkefyvygnlvsiqmknklyyyrctcqgksvlkyhgdsffcescqqfinpqvhlmlrafvqdstgtipvMiFdqqssqlinqidpsihvqeagqyvknciengqeeiirqlfskldfarfifeiqfenKeFnneqEiAyKvLkiekenikeeskyllkklehlinn >7uy7_A: title=TETRAHYMENA CST WITH POLYMERASE ALPHA-PRIMASE organism=? DNA sequence DT(F9) DT(F8) DG(F7) DG(F6) DG(F5) DG(F4) DT(F3) DT(F2) DG(F1):DT(F2) chainA (180) GLN233 0 0 0 0 0 0 0 0 4 (338) TYR391 0 0 1 0 0 0 0 0 0 (340) LYS393 0 0 0 5 0 0 0 0 0 (342) ARG395 15 0 0 0 0 0 0 0 0 (372) ASN425 0 0 0 2 1 0 0 0 0 (420) PHE473 15 0 0 0 0 0 0 0 0 (422) GLN475 4 0 0 0 0 0 0 0 0 (462) LYS515 0 0 11 0 0 0 0 0 0 prot.sequence nlkiledvkklylqsfdyikngissflykfisvnptlllinektqakrrifqgeylygkkkiqfniiaknleiereliqffkkpyqcyimhnvqvfqlyylidesshvleddsmdfistltrlsdsfnsnefvfetnysiqisqmpkplntthfkllqpkvvnsfegvilqvqegknilQieelidqvylnsrrdrfyilkvangknymdfievylvydnedqeakqqlqfylkpfqrilifqslkhftknlklfmisffyssgvqpnnsnvknflvshkgveffsrfdiqknellckdliksynklplsnisklledegvmirsnmkfqvrvkkvkYfKiRlnclnckqewtvglkncinckgqqsyisyNiqvlvqdqhfleqqayiylyddlaaqffnitesekkelhlhltknetFiQlYysfnkdyplsiikfkdkifnkditncivaypfadidnKifnsqqqiiqdenlriesekfiqnftenkqqifvngtyistnysqgqkiclkpipclkvmyvfpqediklsalkiieeinqlkiqidqln >7uy7_ABE:DNA/RNA_polymerases;Ribonuclease_H-like; title=TETRAHYMENA CST WITH POLYMERASE ALPHA-PRIMASE organism=? DNA sequence DT(F9) DT(F8) DG(F7) DG(F6) DG(F5) DG(F4) DT(F3) DT(F2) DG(F1):DT(F2) chainA (180) GLN233 0 0 0 0 0 0 0 0 4 (338) TYR391 0 0 1 0 0 0 0 0 0 (340) LYS393 0 0 0 5 0 0 0 0 0 (342) ARG395 15 0 0 0 0 0 0 0 0 (372) ASN425 0 0 0 2 1 0 0 0 0 (420) PHE473 15 0 0 0 0 0 0 0 0 (422) GLN475 4 0 0 0 0 0 0 0 0 (462) LYS515 0 0 11 0 0 0 0 0 0 chainB chainE (340) SER587 0 11 0 0 0 0 0 0 0 (342) ASP589 0 10 0 0 0 0 0 0 0 (345) LYS592 0 0 0 1 0 0 0 0 0 (346) TYR593 38 0 0 0 0 0 0 0 0 prot.sequence nlkiledvkklylqsfdyikngissflykfisvnptlllinektqakrrifqgeylygkkkiqfniiaknleiereliqffkkpyqcyimhnvqvfqlyylidesshvleddsmdfistltrlsdsfnsnefvfetnysiqisqmpkplntthfkllqpkvvnsfegvilqvqegknilQieelidqvylnsrrdrfyilkvangknymdfievylvydnedqeakqqlqfylkpfqrilifqslkhftknlklfmisffyssgvqpnnsnvknflvshkgveffsrfdiqknellckdliksynklplsnisklledegvmirsnmkfqvrvkkvkYfKiRlnclnckqewtvglkncinckgqqsyisyNiqvlvqdqhfleqqayiylyddlaaqffnitesekkelhlhltknetFiQlYysfnkdyplsiikfkdkifnkditncivaypfadidnKifnsqqqiiqdenlriesekfiqnftenkqqifvngtyistnysqgqkiclkpipclkvmyvfpqediklsalkiieeinqlkiqidqln/dnfelvflkelpslpdfskvcftglilsfsnfpsseqnqqkdvphkiaiiqdstgeaelfldmykfcqeeisvfkaitgigvlkkknigagqvckiiverfriihsadeemlqylliqkyklsktlneqqqikqntlkykeliagelmrithklliqklqqikiqeiakdqqlydtlsiQyqvdqkeqyyakiaqsledfvsisalkmvsyiypnisyqvsigffqnildiatktvkdrgalgcnykylkdkltkalnlqqisyplisesyisylvhlfqdfniieieneh/vkkindyknedgsvdaylydyfydaqvkpdkiyafakvqnkqtnafdtcviqidtiirnlffypssdtvteqqikneiaellkkeqtsrknveflgafvdknyafelpiprgksrwyqvvmsyeyevispdtkgqyfsystysaletflitkkitgpswvrfqnvkdttscitnrklefrvdytnqsniqvlqkqlptpplsvvcislktsqqivlsqkkkeykkeifnlnmkyheginidnsnkdelnqfksisfithidptkkqdsitkkgtlpettkfclnelnlleqflvhfneidpdivvahdlystvfeiiltrirekgirkwnllsklinigSsDipKYgsstfktkmamkgrllvdtllssqefvncveytlealaqklfkieipridakayqqkfatykllnslvddtyqdidyalrimyhlqivpltkqltsicgniwmgslqnqraernemlllhkfnqlnyvypdnfknlpesykkkhknaqirkqyeedkglyneyivlldfnslypsiiqefnvcfttcvrdpiplemqmapflgnkiaplpsilqylveqrkvvknqikgqkdpqvietldikqkafklvansmygclgfsssrfyamplasfitakgrhilfdskkivedmgysviygdtdslmikpgtnefleavktglsikikvnskykklqldidgvfknmlllkkkkyatlkvanweevekeikglsrdagnkileiileskssenmlddikkyliqlnddlqyykrfqlfepikrmlevieginlqeiasil >7uy7_E:DNA/RNA_polymerases;Ribonuclease_H-like; title=TETRAHYMENA CST WITH POLYMERASE ALPHA-PRIMASE organism=? DNA sequence DT(F9) DT(F8) DG(F7) DG(F6) DG(F5) DG(F4) DT(F3) DT(F2) DG(F1):DT(F2) chainE (340) SER587 0 11 0 0 0 0 0 0 0 (342) ASP589 0 10 0 0 0 0 0 0 0 (345) LYS592 0 0 0 1 0 0 0 0 0 (346) TYR593 38 0 0 0 0 0 0 0 0 prot.sequence vkkindyknedgsvdaylydyfydaqvkpdkiyafakvqnkqtnafdtcviqidtiirnlffypssdtvteqqikneiaellkkeqtsrknveflgafvdknyafelpiprgksrwyqvvmsyeyevispdtkgqyfsystysaletflitkkitgpswvrfqnvkdttscitnrklefrvdytnqsniqvlqkqlptpplsvvcislktsqqivlsqkkkeykkeifnlnmkyheginidnsnkdelnqfksisfithidptkkqdsitkkgtlpettkfclnelnlleqflvhfneidpdivvahdlystvfeiiltrirekgirkwnllsklinigSsDipKYgsstfktkmamkgrllvdtllssqefvncveytlealaqklfkieipridakayqqkfatykllnslvddtyqdidyalrimyhlqivpltkqltsicgniwmgslqnqraernemlllhkfnqlnyvypdnfknlpesykkkhknaqirkqyeedkglyneyivlldfnslypsiiqefnvcfttcvrdpiplemqmapflgnkiaplpsilqylveqrkvvknqikgqkdpqvietldikqkafklvansmygclgfsssrfyamplasfitakgrhilfdskkivedmgysviygdtdslmikpgtnefleavktglsikikvnskykklqldidgvfknmlllkkkkyatlkvanweevekeikglsrdagnkileiileskssenmlddikkyliqlnddlqyykrfqlfepikrmlevieginlqeiasil >7uyq_C: title=STRUCTURE OF GTP BINDS TO CYCLIC GMP AMP SYNTHASE (CGAS) THROUGH MG COORDINATION organism=? DNA sequence DA(I1):DT(J18) DT(I2):DA(J17) DC(I3):DG(J16) DT(I4):DA(J15) DG(I5):DC(J14) DT(I6):DA(J13) DA(I7):DT(J12) DC(I8):DG(J11) DA(I9):DT(J10) DT(I10):DA(J9) DG(I11):DC(J8) DT(I12):DA(J7) DA(I13):DT(J6) DC(I14):DG(J5) DA(I15):DT(J4) DG(I16):DC(J3) DA(I17):DT(J2) DT(I18):DA(J1) chainC ( 13) ARG161 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkefkgveqlntgsyyehvkisapnqfnvmfklevprielqeyyetgafylvkfplshfvlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknaqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdkl >7uyz_C: title=STRUCTURE OF TERNARY COMPLEX OF CGAS WITH DSDNA AND BOUND 5 -PPPG(2 ,5 )PG organism=? DNA sequence DA(J1):DT(I18) DT(J2):DA(I17) DC(J3):DG(I16) DT(J4):DA(I15) DG(J5):DC(I14) DT(J6):DA(I13) DA(J7):DT(I12) DC(J8):DG(I11) DA(J9):DT(I10) DT(J10):DA(I9) DG(J11):DC(I8) DT(J12):DA(I7) DA(J13):DT(I6) DC(J14):DG(I5) DA(J15):DT(I4) DG(J16):DC(I3) DA(J17):DT(I2) DT(J18):DA(I1) chainC ( 13) ARG161 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqsefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvplshfvlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknafqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdk >7uzr_C: title=STRUCTURE OF TERNARY COMPLEX OF CGAS WITH DSDNA AND BOUND 5 -PPPG(2 ,5 )PG organism=? DNA sequence DA(I1):DT(J18) DT(I2):DA(J17) DC(I3):DG(J16) DT(I4):DA(J15) DG(I5):DC(J14) DT(I6):DA(J13) DA(I7):DT(J12) DC(I8):DG(J11) DA(I9):DT(J10) DT(I10):DA(J9) DG(I11):DC(J8) DT(I12):DA(J7) DA(I13):DT(J6) DC(I14):DG(J5) DA(I15):DT(J4) DG(I16):DC(J3) DA(I17):DT(J2) DT(I18):DA(J1) chainC ( 13) ARG161 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfshflvlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdk >7v0c_C: title=STRUCTURE OF TERNARY COMPLEX OF CGAS WITH DSDNA AND BOUND 5 -PPPG(2 ,5 )PG organism=? DNA sequence DA(I1):DT(J18) DT(I2):DA(J17) DC(I3):DG(J16) DT(I4):DA(J15) DG(I5):DC(J14) DT(I6):DA(J13) DA(I7):DT(J12) DC(I8):DG(J11) DA(I9):DT(J10) DT(I10):DA(J9) DG(I11):DC(J8) DT(I12):DA(J7) DA(I13):DT(J6) DC(I14):DG(J5) DA(I15):DT(J4) DG(I16):DC(J3) DA(I17):DT(J2) DT(I18):DA(J1) chainC ( 13) ARG161 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkplshflvlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknaqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdk >7v0r_C: title=STRUCTURE OF TERNARY COMPLEX OF CGAS WITH DSDNA AND BOUND 5 -PPCPG(2 ,5 )PA organism=? DNA sequence DA(I1):DT(J18) DT(I2):DA(J17) DC(I3):DG(J16) DT(I4):DA(J15) DG(I5):DC(J14) DT(I6):DA(J13) DA(I7):DT(J12) DC(I8):DG(J11) DA(I9):DT(J10) DT(I10):DA(J9) DG(I11):DC(J8) DT(I12):DA(J7) DA(I13):DT(J6) DC(I14):DG(J5) DA(I15):DT(J4) DG(I16):DC(J3) DA(I17):DT(J2) DT(I18):DA(J1) chainC ( 13) ARG161 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkplshfvlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknaqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdk >7v0w_C: title=STRUCTURE OF TERNARY COMPLEX OF CGAS WITH DSDNA AND BOUND 5 -PPPG(2,5 )PA organism=? DNA sequence DA(I1):DT(J18) DT(I2):DA(J17) DC(I3):DG(J16) DT(I4):DA(J15) DG(I5):DC(J14) DT(I6):DA(J13) DA(I7):DT(J12) DC(I8):DG(J11) DA(I9):DT(J10) DT(I10):DA(J9) DG(I11):DC(J8) DT(I12):DA(J7) DA(I13):DT(J6) DC(I14):DG(J5) DA(I15):DT(J4) DG(I16):DC(J3) DA(I17):DT(J2) DT(I18):DA(J1) chainC ( 13) ARG161 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 prot.sequence klkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnqfnvmfklevprielqeyyetgafylvkfshflvlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknaqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdk >7v59_BE:Cytidine_deaminase-like; title=CRYO-EM STRUCTURE OF SPYCAS9-SGRNA-DNA DIMER organism=? DNA sequence DA(D1):DT(H38) DT(D2):DA(H37) DG(D3):DC(H36) DA(D4):DT(H35) DG(D5):DC(H34) DA(D6):DT(H33) DC(D7):DG(H32) DG(D8):DC(H31) DC(D9):DG(H30) DT(D10):DA(H29) DG(D11):DC(H28) DG(D12):DC(H27) DC(D13):DG(H26) DG(D14):DC(H25) DA(D15):DT(H24) DT(D16):DA(H23) DT(D17):DA(H22) DA(D18):DT(H21) DG(D19):DC(H20) DC(D20):DG(H19) DT(D21):DA(H18) DA(D22):DT(H17) DA(D23):DT(H16) DT(D24):DA(H15) DC(D25):DG(H14) DG(D26):DC(H13) DC(D27):DG(H12) DC(D28):DG(H11) DA(D29):DT(H10) DG(D30):DC(H9) DC(D31):DG(H8) DG(D32):DC(H7) DT(D33):DA(H6) DC(D34):DG(H5) DT(D35):DA(H4) DC(D36):DG(H3) DA(D37):DT(H2) DT(D38):DA(H1) chainB (167) LEU169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (448) TYR450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (489) PHE491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (493) MET495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (767) THR769 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (909) LEU911 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (911) LYS913 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (912) ALA914 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (914) PHE916 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (919) LEU921 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (959) LYS961 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (1105) LYS1107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 (1238) TYR1242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (1329) ARG1333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 13 0 0 0 0 0 0 0 0 0 (1331) ARG1335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 14 11 0 0 0 0 0 0 0 0 0 0 (1333) THR1337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 69) ARG71 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) TYR450 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (489) PHE491 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (493) MET495 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (767) THR769 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (892) GLN894 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (909) LEU911 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (911) LYS913 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (912) ALA914 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (914) PHE916 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (919) LEU921 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (959) LYS961 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1034) TYR1036 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1105) LYS1107 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1106) GLU1108 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1215) GLU1219 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1238) TYR1242 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1329) ARG1333 0 0 0 0 0 0 0 0 0 13 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1331) ARG1335 0 0 0 0 0 0 0 0 0 0 14 17 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1333) THR1337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfLiegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripYyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsFierMtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarenqTtqkgqknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdhivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseLdKAgFikrqLvetrqitkhvaqildsrmntkydendklirevkvitlksKlvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydvrkmiakseqeigkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKespkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagelqkgnelalpskyvnflylashYeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRyTstkevldatlihqsitglyetridlsq/kkysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrRytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripYyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsFierMtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarenqTtqkgqknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdhivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitQrkfdnltkaergglseLdKAgFikrqLvetrqitkhvaqildsrmntkydendklirevkvitlksKlvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydvrkmiakseqeigkatakYffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKEspkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashYeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRyTstkevldatlihqsitglyetridlsq >7v59_E: title=CRYO-EM STRUCTURE OF SPYCAS9-SGRNA-DNA DIMER organism=? DNA sequence DA(D1):DT(H38) DT(D2):DA(H37) DG(D3):DC(H36) DA(D4):DT(H35) DG(D5):DC(H34) DA(D6):DT(H33) DC(D7):DG(H32) DG(D8):DC(H31) DC(D9):DG(H30) DT(D10):DA(H29) DG(D11):DC(H28) DG(D12):DC(H27) DC(D13):DG(H26) DG(D14):DC(H25) DA(D15):DT(H24) DT(D16):DA(H23) DT(D17):DA(H22) DA(D18):DT(H21) DG(D19):DC(H20) DC(D20):DG(H19) DT(D21):DA(H18) DA(D22):DT(H17) DA(D23):DT(H16) DT(D24):DA(H15) DC(D25):DG(H14) DG(D26):DC(H13) DC(D27):DG(H12) DC(D28):DG(H11) DA(D29):DT(H10) DG(D30):DC(H9) DC(D31):DG(H8) DG(D32):DC(H7) DT(D33):DA(H6) DC(D34):DG(H5) DT(D35):DA(H4) DC(D36):DG(H3) DA(D37):DT(H2) DT(D38):DA(H1) chainE ( 69) ARG71 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (448) TYR450 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (489) PHE491 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (493) MET495 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (767) THR769 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (892) GLN894 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (909) LEU911 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (911) LYS913 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (912) ALA914 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (914) PHE916 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (919) LEU921 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (959) LYS961 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1034) TYR1036 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1105) LYS1107 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1106) GLU1108 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1215) GLU1219 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1238) TYR1242 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1329) ARG1333 0 0 0 0 0 0 0 0 0 13 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1331) ARG1335 0 0 0 0 0 0 0 0 0 0 14 17 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1333) THR1337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrRytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripYyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsFierMtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarenqTtqkgqknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdhivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitQrkfdnltkaergglseLdKAgFikrqLvetrqitkhvaqildsrmntkydendklirevkvitlksKlvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydvrkmiakseqeigkatakYffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKEspkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashYeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRyTstkevldatlihqsitglyetridlsq >7v5n_AB:Immunoglobulin; title=CRYSTAL STRUCTURE OF FAB FRAGMENT OF BEVACIZUMAB BOUND TO DNA APTAMER organism=HOMO SAPIENS DNA sequence DG(D1):DC(D24) DC(D2):DG(D23) DG(D3):DC(D22) DG(D4):DT(D21) DT(D6):DG(D19) DG(D7):DC(D18) DG(D8):DA(D17) chainA chainB ( 28) THR28 0 0 0 0 0 0 2 ( 31) ASN31 0 0 0 0 0 0 4 (101) HIS101 0 0 0 0 31 10 0 (102) TYR102 0 0 0 0 0 0 4 prot.sequence diqmtqspsslsasvgdrvtitcsasqdisnylnwyqqkpgkapkvliyftsslhsgvpsrfsgsgsgtdftltisslqpedfatyycqqystvpwtfgqgtkveikrtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltlskadyekhkvyacevthqglsspvtksfnrg/evqlvesggglvqpggslrlscaasgyTftNYgmnwvrqapgkglewvgwintytgeptyaadfkrrftfsldtskstaylqmnslraedtavyycakypHYygsshwyfdvwgqgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvep >7v5n_B:Immunoglobulin; title=CRYSTAL STRUCTURE OF FAB FRAGMENT OF BEVACIZUMAB BOUND TO DNA APTAMER organism=HOMO SAPIENS DNA sequence DG(D1):DC(D24) DC(D2):DG(D23) DG(D3):DC(D22) DG(D4):DT(D21) DT(D6):DG(D19) DG(D7):DC(D18) DG(D8):DA(D17) chainB ( 28) THR28 0 0 0 0 0 0 2 ( 31) ASN31 0 0 0 0 0 0 4 (101) HIS101 0 0 0 0 31 10 0 (102) TYR102 0 0 0 0 0 0 4 prot.sequence evqlvesggglvqpggslrlscaasgyTftNYgmnwvrqapgkglewvgwintytgeptyaadfkrrftfsldtskstaylqmnslraedtavyycakypHYygsshwyfdvwgqgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvep >7v5n_EF:Immunoglobulin; title=CRYSTAL STRUCTURE OF FAB FRAGMENT OF BEVACIZUMAB BOUND TO DNA APTAMER organism=HOMO SAPIENS DNA sequence DG(G1):DC(G24) DC(G2):DG(G23) DG(G3):DC(G22) DG(G4):DT(G21) DT(G6):DG(G19) DG(G7):DC(G18) DG(G8):DA(G17) chainE chainF ( 28) THR28 0 0 0 0 0 0 2 ( 31) ASN31 0 0 0 0 0 0 2 (101) HIS101 0 0 0 0 32 11 0 (102) TYR102 0 0 0 0 0 0 4 prot.sequence diqmtqspsslsasvgdrvtitcsasqdisnylnwyqqkpgkapkvliyftsslhsgvpsrfsgsgsgtdftltisslqpedfatyycqqystvpwtfgqgtkveikrtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltlskadyekhkvyacevthqglsspvtksfnrg/evqlvesggglvqpggslrlscaasgyTftNYgmnwvrqapgkglewvgwintytgeptyaadfkrrftfsldtskstaylqmnslraedtavyycakypHYygsshwyfdvwgqgtlvtvssastkgpsvfplapgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvep >7v6w_ABCDM:YefM-like; title=CRYSTAL STRUCTURE OF HETEROHEXAMERIC SA2YOEB-SA2YEFM COMPLEX BOUND TO 26BP-DNA organism=? DNA sequence DT(G2):DA(H25) DG(G3):DC(H24) DA(G4):DT(H23) DC(G5):DG(H22) DG(G6):DC(H21) DT(G7):DA(H20) DA(G8):DT(H19) DC(G9):DG(H18) DT(G10):DA(H17) DC(G11):DG(H16) DA(G12):DT(H15) DA(G13):DT(H14) DG(G14):DC(H13) DT(G15):DA(H12) DG(G16):DC(H11) DC(G17):DG(H10) DG(G18):DC(H9) DT(G19):DA(H8) DA(G20):DT(H7) DC(G21):DG(H6) DG(G22):DC(H5) DC(G23):DG(H4) DT(G24):DA(H3) DA(G25):DT(H2) DT(G26):DA(H1) chainB ( 7) THR7 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 6 14 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR14 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 7) THR7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 11 0 0 0 0 0 0 0 ( 14) TYR14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 chainA ( 7) THR7 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 11 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR14 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 53) TYR53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 chainD ( 7) THR7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 7 0 0 0 0 ( 11) LYS11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 ( 14) TYR14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 prot.sequence miitspTeaRkdfYqllknvnnnhepiyisgnnaennaviigledwksiqetiylest/miitspTeaRkdfYqllknvnnnhepiyisgnnaennaviigledwksiqetiylestgtmdkvrerekdnsgttniddidwdnl/miitspTeaRkdfYqllknvnnnhepiyisgnnaennaviigledwksiqetiyle/miitspTeaRKdfYqllknvnnnhepiyisgnnaennaviigledwksiqetiylestgtmdkvrerekdnsgttniddidwdn/msnytvkiknsaksdlkkikhsylkksfleivetlkndpykitqsfeklepkYlerysrrinhqhrvvytvddrnkevlilsawshyd >7v6w_FKL:YefM-like; title=CRYSTAL STRUCTURE OF HETEROHEXAMERIC SA2YOEB-SA2YEFM COMPLEX BOUND TO 26BP-DNA organism=? DNA sequence DT(O1):DA(P26) DT(O2):DA(P25) DG(O3):DC(P24) DA(O4):DT(P23) DC(O5):DG(P22) DG(O6):DC(P21) DT(O7):DA(P20) DA(O8):DT(P19) DC(O9):DG(P18) DT(O10):DA(P17) DC(O11):DG(P16) DA(O12):DT(P15) DA(O13):DT(P14) DG(O14):DC(P13) DT(O15):DA(P12) DG(O16):DC(P11) DC(O17):DG(P10) DG(O18):DC(P9) DT(O19):DA(P8) DA(O20):DT(P7) DC(O21):DG(P6) DG(O22):DC(P5) DC(O23):DG(P4) DT(O24):DA(P3) DA(O25):DT(P2) chainF ( 53) TYR53 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 7) THR7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 8 0 0 0 ( 11) LYS11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 14) TYR14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 chainK ( 7) THR7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 10 0 0 0 0 0 0 ( 14) TYR14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 prot.sequence msnytvkiknsaksdlkkikhsylkksfleivetlkndpykitqsfeklepkYlerysrrinhqhrvvytvddrnkevlilsawshyd/miitspTeaRkdfYqllknvnnnhepiyisgnnaennaviigledwksiqetiylest/miitspTeaRKdfYqllknvnnnhepiyisgnnaennaviigledwksiqetiylestgtmdkvrerekdnsgttniddidwdnl >7v6w_I:YefM-like; title=CRYSTAL STRUCTURE OF HETEROHEXAMERIC SA2YOEB-SA2YEFM COMPLEX BOUND TO 26BP-DNA organism=? DNA sequence DT(O1):DA(P26) DT(O2):DA(P25) DG(O3):DC(P24) DA(O4):DT(P23) DC(O5):DG(P22) DG(O6):DC(P21) DT(O7):DA(P20) DA(O8):DT(P19) DC(O9):DG(P18) DT(O10):DA(P17) DC(O11):DG(P16) DA(O12):DT(P15) DA(O13):DT(P14) DG(O14):DC(P13) DT(O15):DA(P12) DG(O16):DC(P11) DC(O17):DG(P10) DG(O18):DC(P9) DT(O19):DA(P8) DA(O20):DT(P7) DC(O21):DG(P6) DG(O22):DC(P5) DC(O23):DG(P4) DT(O24):DA(P3) DA(O25):DT(P2) chainI ( 7) THR7 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 10 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR14 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN32 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence miitspTeaRkdfYqllknvnnnhepiyisgNnaennaviigledwksiqetiyle >7v6w_IJ:YefM-like; title=CRYSTAL STRUCTURE OF HETEROHEXAMERIC SA2YOEB-SA2YEFM COMPLEX BOUND TO 26BP-DNA organism=? DNA sequence DT(O1):DA(P26) DT(O2):DA(P25) DG(O3):DC(P24) DA(O4):DT(P23) DC(O5):DG(P22) DG(O6):DC(P21) DT(O7):DA(P20) DA(O8):DT(P19) DC(O9):DG(P18) DT(O10):DA(P17) DC(O11):DG(P16) DA(O12):DT(P15) DA(O13):DT(P14) DG(O14):DC(P13) DT(O15):DA(P12) DG(O16):DC(P11) DC(O17):DG(P10) DG(O18):DC(P9) DT(O19):DA(P8) DA(O20):DT(P7) DC(O21):DG(P6) DG(O22):DC(P5) DC(O23):DG(P4) DT(O24):DA(P3) DA(O25):DT(P2) chainI ( 7) THR7 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 0 0 0 10 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR14 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ASN32 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 7) THR7 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ARG10 0 0 0 0 6 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) LYS11 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) TYR14 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence miitspTeaRkdfYqllknvnnnhepiyisgNnaennaviigledwksiqetiyle/miitspTeaRKdfYqllknvnnnhepiyisgnnaennaviigledwksiqetiylestgtmdkvrerekdnsgttniddidwdnl >7v90_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=TELOMERIC MONONUCLEOSOME organism=? DNA sequence DC(J-72):DG(I72) DT(J-71):DA(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DC(J-68):DG(I68) DC(J-67):DG(I67) DC(J-66):DG(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DA(J-58):DT(I58) DA(J-57):DT(I57) DC(J-56):DG(I56) DC(J-55):DG(I55) DC(J-54):DG(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DA(J-51):DT(I51) DC(J-50):DG(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DC(J-44):DG(I44) DC(J-43):DG(I43) DC(J-42):DG(I42) DT(J-41):DA(I41) DA(J-40):DT(I40) DA(J-39):DT(I39) DC(J-38):DG(I38) DC(J-37):DG(I37) DC(J-36):DG(I36) DT(J-35):DA(I35) DA(J-34):DT(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DC(J-31):DG(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DA(J-28):DT(I28) DA(J-27):DT(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DT(J-23):DA(I23) DA(J-22):DT(I22) DA(J-21):DT(I21) DC(J-20):DG(I20) DC(J-19):DG(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DA(J-16):DT(I16) DA(J-15):DT(I15) DC(J-14):DG(I14) DC(J-13):DG(I13) DC(J-12):DG(I12) DT(J-11):DA(I11) DA(J-10):DT(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DC(J-7):DG(I7) DC(J-6):DG(I6) DT(J-5):DA(I5) DA(J-4):DT(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DC(J-1):DG(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DA(J2):DT(I-2) DA(J3):DT(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DC(J11):DG(I-11) DC(J12):DG(I-12) DT(J13):DA(I-13) DA(J14):DT(I-14) DA(J15):DT(I-15) DC(J16):DG(I-16) DC(J17):DG(I-17) DC(J18):DG(I-18) DT(J19):DA(I-19) DA(J20):DT(I-20) DA(J21):DT(I-21) DC(J22):DG(I-22) DC(J23):DG(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DA(J27):DT(I-27) DC(J28):DG(I-28) DC(J29):DG(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DA(J33):DT(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DT(J37):DA(I-37) DA(J38):DT(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DA(J44):DT(I-44) DA(J45):DT(I-45) DC(J46):DG(I-46) DC(J47):DG(I-47) DC(J48):DG(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DA(J51):DT(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DC(J54):DG(I-54) DT(J55):DA(I-55) DA(J56):DT(I-56) DA(J57):DT(I-57) DC(J58):DG(I-58) DC(J59):DG(I-59) DC(J60):DG(I-60) DT(J61):DA(I-61) DA(J62):DT(I-62) DA(J63):DT(I-63) DC(J64):DG(I-64) DC(J65):DG(I-65) DC(J66):DG(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DA(J69):DT(I-69) DC(J70):DG(I-70) DC(J71):DG(I-71) DC(J72):DG(I-72) chainA ( 4) HIS39 0 0 3 11 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/kvlRDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kkRkrsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kkpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/kvlRDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kkRkrsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7v90_D:Histone-fold; title=TELOMERIC MONONUCLEOSOME organism=? DNA sequence DC(J-72):DG(I72) DT(J-71):DA(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DC(J-68):DG(I68) DC(J-67):DG(I67) DC(J-66):DG(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DC(J-60):DG(I60) DT(J-59):DA(I59) DA(J-58):DT(I58) DA(J-57):DT(I57) DC(J-56):DG(I56) DC(J-55):DG(I55) DC(J-54):DG(I54) DT(J-53):DA(I53) DA(J-52):DT(I52) DA(J-51):DT(I51) DC(J-50):DG(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DC(J-44):DG(I44) DC(J-43):DG(I43) DC(J-42):DG(I42) DT(J-41):DA(I41) DA(J-40):DT(I40) DA(J-39):DT(I39) DC(J-38):DG(I38) DC(J-37):DG(I37) DC(J-36):DG(I36) DT(J-35):DA(I35) DA(J-34):DT(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DC(J-31):DG(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DA(J-28):DT(I28) DA(J-27):DT(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DT(J-23):DA(I23) DA(J-22):DT(I22) DA(J-21):DT(I21) DC(J-20):DG(I20) DC(J-19):DG(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DA(J-16):DT(I16) DA(J-15):DT(I15) DC(J-14):DG(I14) DC(J-13):DG(I13) DC(J-12):DG(I12) DT(J-11):DA(I11) DA(J-10):DT(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DC(J-7):DG(I7) DC(J-6):DG(I6) DT(J-5):DA(I5) DA(J-4):DT(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DC(J-1):DG(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DA(J2):DT(I-2) DA(J3):DT(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DA(J8):DT(I-8) DA(J9):DT(I-9) DC(J10):DG(I-10) DC(J11):DG(I-11) DC(J12):DG(I-12) DT(J13):DA(I-13) DA(J14):DT(I-14) DA(J15):DT(I-15) DC(J16):DG(I-16) DC(J17):DG(I-17) DC(J18):DG(I-18) DT(J19):DA(I-19) DA(J20):DT(I-20) DA(J21):DT(I-21) DC(J22):DG(I-22) DC(J23):DG(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DA(J27):DT(I-27) DC(J28):DG(I-28) DC(J29):DG(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DA(J33):DT(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DT(J37):DA(I-37) DA(J38):DT(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DA(J44):DT(I-44) DA(J45):DT(I-45) DC(J46):DG(I-46) DC(J47):DG(I-47) DC(J48):DG(I-48) DT(J49):DA(I-49) DA(J50):DT(I-50) DA(J51):DT(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DC(J54):DG(I-54) DT(J55):DA(I-55) DA(J56):DT(I-56) DA(J57):DT(I-57) DC(J58):DG(I-58) DC(J59):DG(I-59) DC(J60):DG(I-60) DT(J61):DA(I-61) DA(J62):DT(I-62) DA(J63):DT(I-63) DC(J64):DG(I-64) DC(J65):DG(I-65) DC(J66):DG(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DA(J69):DT(I-69) DC(J70):DG(I-70) DC(J71):DG(I-71) DC(J72):DG(I-72) chainD ( 3) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkRkrsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7v94_A: title=CRYO-EM STRUCTURE OF THE CAS12C2-SGRNA-TARGET DNA TERNARY COMPLEX organism=UNCULTURED ARCHAEON DNA sequence DA(D3):DT(C23) DA(D4):DT(C22) DA(D5):DT(C21) DA(D6):DT(C20) DT(D7):DA(C19) DG(D8):DC(C18) chainA (133) ARG137 0 0 0 10 5 4 (281) ASN289 0 0 0 0 0 16 (283) THR291 0 0 0 0 6 2 (286) SER294 0 0 0 0 2 0 (343) ARG351 0 0 0 0 5 0 prot.sequence siplhafrnsgadarkwkgriallakrgketmrtlqfplemsepeaaainttpfavaynaiegtgkgtlfdywaklhlagfrffpsggaatifrqqavfedaswnaafcqqsgkdwpwlvpsklyerftkapRevaskksieftqenvaneshvslvgasitdktpedqkefflkmagalaekfdswksanedrivamkvideflkseglhlpsleniavkcsvetkpdnatvawhdapmsgvqnlaigvfatcasridniydlnggklskliqesattpNvTalSwlfgkgleyfrttdidtimqdfnipasakesikplvesaqaiptmtvlgkknyapfRpnfggkidswianyasrlmllndileqiepgfelpqalldnetlmsgidmtgdelkelieavyawvdaakqglatllgrggnvddavqtfeqfsammdtlngtlntisaryvravemagkdearleklieckfdipkwcksvpklvgisgglpkveeeikvmnaafkdvrarmfvrfeeiaayvaskgagmdvydalekreleqikahiqayravlhrigravqncsektkqlfsskviemgvfknpshlnnfifnqkgaiyrspfdrsrhapyqlhadkllkndwlellaeisatlmasesteqmedalrlertrlqlqlsglpdweypaslakpdieveiqtalkmqlakdtvtsdvlqrafnlyssvlsgltfkllrrsfslkmrfsvadttqliyvpkvcdwaipkqylqaegeigiaarvvtesspakmvtevemkepkalghfmqqaphdwyfdaslggtqvagrivekgkevgkerklvgyrmrgnsayktvldkslvgntelsqcsmiieipytqtvdadfraqvqaglpkvsinlpvketitamlfdrfvaidlgerglgyavfdaktlelqesghrpikaitnllnrthhyeqrpnqrqkfqakfnvnlselrentvgdvchqinricayynafpvleymvpdrldkqlksvyesvtnryiwsstdahksarvqfwlggetwehpylksakdkkplvlspgrgahadenaavniggkfiadie >7v96_Q:Histone-fold; title=TELOMERIC DINUCLEOSOME organism=? DNA sequence DG(I1):DC(J275) DG(I2):DC(J274) DG(I3):DC(J273) DT(I4):DA(J272) DT(I5):DA(J271) DA(I6):DT(J270) DG(I7):DC(J269) DG(I8):DC(J268) DG(I9):DC(J267) DT(I10):DA(J266) DT(I11):DA(J265) DA(I12):DT(J264) DG(I13):DC(J263) DG(I14):DC(J262) DG(I15):DC(J261) DT(I16):DA(J260) DT(I17):DA(J259) DA(I18):DT(J258) DG(I19):DC(J257) DG(I20):DC(J256) DG(I21):DC(J255) DT(I22):DA(J254) DT(I23):DA(J253) DA(I24):DT(J252) DG(I25):DC(J251) DG(I26):DC(J250) DG(I27):DC(J249) DT(I28):DA(J248) DT(I29):DA(J247) DA(I30):DT(J246) DG(I31):DC(J245) DG(I32):DC(J244) DG(I33):DC(J243) DT(I34):DA(J242) DT(I35):DA(J241) DA(I36):DT(J240) DG(I37):DC(J239) DG(I38):DC(J238) DG(I39):DC(J237) DT(I40):DA(J236) DT(I41):DA(J235) DA(I42):DT(J234) DG(I43):DC(J233) DG(I44):DC(J232) DG(I45):DC(J231) DT(I46):DA(J230) DT(I47):DA(J229) DA(I48):DT(J228) DG(I49):DC(J227) DG(I50):DC(J226) DG(I51):DC(J225) DT(I52):DA(J224) DT(I53):DA(J223) DA(I54):DT(J222) DG(I55):DC(J221) DG(I56):DC(J220) DG(I57):DC(J219) DT(I58):DA(J218) DT(I59):DA(J217) DA(I60):DT(J216) DG(I61):DC(J215) DG(I62):DC(J214) DG(I63):DC(J213) DT(I64):DA(J212) DT(I65):DA(J211) DA(I66):DT(J210) DG(I67):DC(J209) DG(I68):DC(J208) DG(I69):DC(J207) DT(I70):DA(J206) DT(I71):DA(J205) DA(I72):DT(J204) DG(I73):DC(J203) DG(I74):DC(J202) DG(I75):DC(J201) DT(I76):DA(J200) DT(I77):DA(J199) DA(I78):DT(J198) DG(I79):DC(J197) DG(I80):DC(J196) DG(I81):DC(J195) DT(I82):DA(J194) DT(I83):DA(J193) DA(I84):DT(J192) DG(I85):DC(J191) DG(I86):DC(J190) DG(I87):DC(J189) DT(I88):DA(J188) DT(I89):DA(J187) DA(I90):DT(J186) DG(I91):DC(J185) DG(I92):DC(J184) DG(I93):DC(J183) DT(I94):DA(J182) DT(I95):DA(J181) DA(I96):DT(J180) DG(I97):DC(J179) DG(I98):DC(J178) DG(I99):DC(J177) DT(I100):DA(J176) DT(I101):DA(J175) DA(I102):DT(J174) DG(I103):DC(J173) DG(I104):DC(J172) DG(I105):DC(J171) DT(I106):DA(J170) DT(I107):DA(J169) DA(I108):DT(J168) DG(I109):DC(J167) DG(I110):DC(J166) DG(I111):DC(J165) DT(I112):DA(J164) DT(I113):DA(J163) DA(I114):DT(J162) DG(I115):DC(J161) DG(I116):DC(J160) DG(I117):DC(J159) DT(I118):DA(J158) DT(I119):DA(J157) DA(I120):DT(J156) DG(I121):DC(J155) DG(I122):DC(J154) DG(I123):DC(J153) DT(I124):DA(J152) DT(I125):DA(J151) DA(I126):DT(J150) DG(I127):DC(J149) DG(I128):DC(J148) DG(I129):DC(J147) DT(I130):DA(J146) DT(I131):DA(J145) DA(I132):DT(J144) DG(I133):DC(J143) DG(I134):DC(J142) DG(I135):DC(J141) DT(I136):DA(J140) DT(I137):DA(J139) DA(I138):DT(J138) DG(I139):DC(J137) DG(I140):DC(J136) DG(I141):DC(J135) DT(I142):DA(J134) DT(I143):DA(J133) DA(I144):DT(J132) DG(I145):DC(J131) DG(I146):DC(J130) DG(I147):DC(J129) DT(I148):DA(J128) DT(I149):DA(J127) DA(I150):DT(J126) DG(I151):DC(J125) DG(I152):DC(J124) DG(I153):DC(J123) DT(I154):DA(J122) DT(I155):DA(J121) DA(I156):DT(J120) DG(I157):DC(J119) DG(I158):DC(J118) DG(I159):DC(J117) DT(I160):DA(J116) DT(I161):DA(J115) DA(I162):DT(J114) DG(I163):DC(J113) DG(I164):DC(J112) DG(I165):DC(J111) DT(I166):DA(J110) DT(I167):DA(J109) DA(I168):DT(J108) DG(I169):DC(J107) DG(I170):DC(J106) DG(I171):DC(J105) DT(I172):DA(J104) DT(I173):DA(J103) DA(I174):DT(J102) DG(I175):DC(J101) DG(I176):DC(J100) DG(I177):DC(J99) DT(I178):DA(J98) DT(I179):DA(J97) DA(I180):DT(J96) DG(I181):DC(J95) DG(I182):DC(J94) DG(I183):DC(J93) DT(I184):DA(J92) DT(I185):DA(J91) DA(I186):DT(J90) DG(I187):DC(J89) DG(I188):DC(J88) DG(I189):DC(J87) DT(I190):DA(J86) DT(I191):DA(J85) DA(I192):DT(J84) DG(I193):DC(J83) DG(I194):DC(J82) DG(I195):DC(J81) DT(I196):DA(J80) DT(I197):DA(J79) DA(I198):DT(J78) DG(I199):DC(J77) DG(I200):DC(J76) DG(I201):DC(J75) DT(I202):DA(J74) DT(I203):DA(J73) DA(I204):DT(J72) DG(I205):DC(J71) DG(I206):DC(J70) DG(I207):DC(J69) DT(I208):DA(J68) DT(I209):DA(J67) DA(I210):DT(J66) DG(I211):DC(J65) DG(I212):DC(J64) DG(I213):DC(J63) DT(I214):DA(J62) DT(I215):DA(J61) DA(I216):DT(J60) DG(I217):DC(J59) DG(I218):DC(J58) DG(I219):DC(J57) DT(I220):DA(J56) DT(I221):DA(J55) DA(I222):DT(J54) DG(I223):DC(J53) DG(I224):DC(J52) DG(I225):DC(J51) DT(I226):DA(J50) DT(I227):DA(J49) DA(I228):DT(J48) DG(I229):DC(J47) DG(I230):DC(J46) DG(I231):DC(J45) DT(I232):DA(J44) DT(I233):DA(J43) DA(I234):DT(J42) DG(I235):DC(J41) DG(I236):DC(J40) DG(I237):DC(J39) DT(I238):DA(J38) DT(I239):DA(J37) DA(I240):DT(J36) DG(I241):DC(J35) DG(I242):DC(J34) DG(I243):DC(J33) DT(I244):DA(J32) DT(I245):DA(J31) DA(I246):DT(J30) DG(I247):DC(J29) DG(I248):DC(J28) DG(I249):DC(J27) DT(I250):DA(J26) DT(I251):DA(J25) DA(I252):DT(J24) DG(I253):DC(J23) DG(I254):DC(J22) DG(I255):DC(J21) DT(I256):DA(J20) DT(I257):DA(J19) DA(I258):DT(J18) DG(I259):DC(J17) DG(I260):DC(J16) DG(I261):DC(J15) DT(I262):DA(J14) DT(I263):DA(J13) DA(I264):DT(J12) DG(I265):DC(J11) DG(I266):DC(J10) DG(I267):DC(J9) DT(I268):DA(J8) DT(I269):DA(J7) DA(I270):DT(J6) DG(I271):DC(J5) DG(I272):DC(J4) DG(I273):DC(J3) DT(I274):DA(J2) DT(I275):DA(J1) chainQ ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk >7v99_A:DNA/RNA_polymerases; title=CATALYTIC CORE OF HUMAN TELOMERASE HOLOENZYME organism=HOMO SAPIENS DNA sequence DT(S19) DT(S20) DA(S21) DG(S22) DG(S23) DG(S24) chainA (615) ARG756 4 0 0 0 0 0 (839) LEU980 0 0 2 0 0 0 prot.sequence praprcravrsllrshyrevlplatfvrrlgpqgwrlvqrgdpaafralvaqclvcvpwdarpppaapsfrqvsclkelvarvlqrlcergaknvlafgfalldgarggppeafttsvrsylpntvtdalrgsgawglllrrvgddvlvhllarcalfvlvapscayqvcgpplyqlgaappvyaetkhflyssgdkeqlrpsfllsslrpsltgarrlvetiflgsrpwmpgtprrlprlpqrywqmrplflellgnhaqcpygvllkthcplraavtpaagvcarekpqgsvaapeeedtdprrlvqllrqhsspwqvygfvraclrrlvppglwgsrhnerrflrntkkfislgkhaklslqeltwkmsvrdcawlrrspgvgcvpaaehrlreeilakflhwlmsvyvvellrsffyvtettfqknrlffyrksvwsklqsigirqhlkrvqlrelseaevrqhrearpalltsrlrfipkpdglrpivnmdyvvgartfrrekraerltsrvkalfsvlnyerarrpgllgasvlglddihrawrtfvlrvraqdpppelyfvkvdvtgaydtipqdrlteviasiikpqntycvrryavvqkaahghvRkafkshvstltdlqpymrqfvahlqetsplrdavvieqssslneassglfdvflrfmchhavrirgksyvqcqgipqgsilstllcslcygdmenklfagirrdglllrlvddfllvtphlthaktflrtlvrgvpeygcvvnlrktvvnfpvedealggtafvqmpahglfpwcgllldtrtlevqsdyssyartsirasltfnrgfkagrnmrrklfgvlrLkchslfldlqvnslqtvctniykilllqayrfhacvlqlpfhqqvwknptfflrvisdtaslcysilkaknagmslgakgaagplpseavqwlchqafllkltrhrvtyvpllgslrtaqtqlsrklpgttltaleaaanpalpsdfktild >7v9g_D: title=NATIVE BEN4 DOMAIN OF PROTEIN BEND3 WITH DNA organism=Mus musculus DNA sequence DG(C1):DC(B16) DC(C2):DG(B15) DA(C3):DT(B14) DC(C4):DG(B13) DC(C5):DG(B12) DG(C6):DC(B11) DC(C7):DG(B10) DG(C8):DC(B9) DT(C9):DA(B8) DG(C10):DC(B7) DG(C11):DC(B6) DG(C12):DC(B5) DG(C13):DC(B4) DC(C14):DG(B3) DC(C15):DG(B2) DA(C16):DT(B1) chainD ( 91) GLU804 0 0 0 0 0 0 0 0 2 12 0 0 0 0 0 0 ( 94) ARG807 0 0 0 0 0 0 13 12 1 0 0 0 0 0 0 0 ( 95) ARG808 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 ( 96) PRO809 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 99) LYS812 0 0 0 0 0 0 0 0 0 6 9 8 1 0 0 0 prot.sequence spyllsdkevreivqqslsvgnfaarllvrlfpelfttenlrlqynhsgacnkkqldptrlrlirhyveavypvekmeevwhyecipsidErcRRPnrKkcdilkkakkvek >7v9i_A: title=THE MONOMER MUTANT OF BEN4 DOMAIN OF PROTEIN BEND3 WITH DNA organism=Mus musculus DNA sequence DA(C3):DT(B14) DC(C4):DG(B13) DC(C5):DG(B12) DG(C6):DC(B11) DC(C7):DG(B10) DG(C8):DC(B9) DT(C9):DA(B8) DG(C10):DC(B7) DG(C11):DC(B6) DG(C12):DC(B5) DG(C13):DC(B4) DC(C14):DG(B3) chainA ( 88) GLU804 0 0 0 0 0 0 3 12 0 0 0 0 ( 91) ARG807 0 0 0 0 12 16 0 0 0 0 0 0 ( 92) ARG808 0 0 0 0 0 0 0 0 4 0 0 0 ( 93) PRO809 0 0 0 0 0 0 1 0 0 0 0 0 ( 96) LYS812 0 0 0 0 0 0 0 2 7 9 0 0 prot.sequence llsdkevreivqqslsvgnfaarllvrlfpelfttenlrlqynhsgacnkkqldptrlrlirhyveavyprakndrvwhyecipsidErcRRPnrKkcdilkkak >7v9j_C:Histone-fold; title=TELOMERIC TRINUCLEOSOME organism=? DNA sequence DC(J1):DG(I399) DC(J2):DG(I398) DC(J3):DG(I397) DT(J4):DA(I396) DA(J5):DT(I395) DA(J6):DT(I394) DC(J7):DG(I393) DC(J8):DG(I392) DC(J9):DG(I391) DT(J10):DA(I390) DA(J11):DT(I389) DA(J12):DT(I388) DC(J13):DG(I387) DC(J14):DG(I386) DC(J15):DG(I385) DT(J16):DA(I384) DA(J17):DT(I383) DA(J18):DT(I382) DC(J19):DG(I381) DC(J20):DG(I380) DC(J21):DG(I379) DT(J22):DA(I378) DA(J23):DT(I377) DA(J24):DT(I376) DC(J25):DG(I375) DC(J26):DG(I374) DC(J27):DG(I373) DT(J28):DA(I372) DA(J29):DT(I371) DA(J30):DT(I370) DC(J31):DG(I369) DC(J32):DG(I368) DC(J33):DG(I367) DT(J34):DA(I366) DA(J35):DT(I365) DA(J36):DT(I364) DC(J37):DG(I363) DC(J38):DG(I362) DC(J39):DG(I361) DT(J40):DA(I360) DA(J41):DT(I359) DA(J42):DT(I358) DC(J43):DG(I357) DC(J44):DG(I356) DC(J45):DG(I355) DT(J46):DA(I354) DA(J47):DT(I353) DA(J48):DT(I352) DC(J49):DG(I351) DC(J50):DG(I350) DC(J51):DG(I349) DT(J52):DA(I348) DA(J53):DT(I347) DA(J54):DT(I346) DC(J55):DG(I345) DC(J56):DG(I344) DC(J57):DG(I343) DT(J58):DA(I342) DA(J59):DT(I341) DA(J60):DT(I340) DC(J61):DG(I339) DC(J62):DG(I338) DC(J63):DG(I337) DT(J64):DA(I336) DA(J65):DT(I335) DA(J66):DT(I334) DC(J67):DG(I333) DC(J68):DG(I332) DC(J69):DG(I331) DT(J70):DA(I330) DA(J71):DT(I329) DA(J72):DT(I328) DC(J73):DG(I327) DC(J74):DG(I326) DC(J75):DG(I325) DT(J76):DA(I324) DA(J77):DT(I323) DA(J78):DT(I322) DC(J79):DG(I321) DC(J80):DG(I320) DC(J81):DG(I319) DT(J82):DA(I318) DA(J83):DT(I317) DA(J84):DT(I316) DC(J85):DG(I315) DC(J86):DG(I314) DC(J87):DG(I313) DT(J88):DA(I312) DA(J89):DT(I311) DA(J90):DT(I310) DC(J91):DG(I309) DC(J92):DG(I308) DC(J93):DG(I307) DT(J94):DA(I306) DA(J95):DT(I305) DA(J96):DT(I304) DC(J97):DG(I303) DC(J98):DG(I302) DC(J99):DG(I301) DT(J100):DA(I300) DA(J101):DT(I299) DA(J102):DT(I298) DC(J103):DG(I297) DC(J104):DG(I296) DC(J105):DG(I295) DT(J106):DA(I294) DA(J107):DT(I293) DA(J108):DT(I292) DC(J109):DG(I291) DC(J110):DG(I290) DC(J111):DG(I289) DT(J112):DA(I288) DA(J113):DT(I287) DA(J114):DT(I286) DC(J115):DG(I285) DC(J116):DG(I284) DC(J117):DG(I283) DT(J118):DA(I282) DA(J119):DT(I281) DA(J120):DT(I280) DC(J121):DG(I279) DC(J122):DG(I278) DC(J123):DG(I277) DT(J124):DA(I276) DA(J125):DT(I275) DA(J126):DT(I274) DC(J127):DG(I273) DC(J128):DG(I272) DC(J129):DG(I271) DT(J130):DA(I270) DA(J131):DT(I269) DA(J132):DT(I268) DC(J133):DG(I267) DC(J134):DG(I266) DC(J135):DG(I265) DT(J136):DA(I264) DA(J137):DT(I263) DA(J138):DT(I262) DC(J139):DG(I261) DC(J140):DG(I260) DC(J141):DG(I259) DT(J142):DA(I258) DA(J143):DT(I257) DA(J144):DT(I256) DC(J145):DG(I255) DC(J146):DG(I254) DC(J147):DG(I253) DT(J148):DA(I252) DA(J149):DT(I251) DA(J150):DT(I250) DC(J151):DG(I249) DC(J152):DG(I248) DC(J153):DG(I247) DT(J154):DA(I246) DA(J155):DT(I245) DA(J156):DT(I244) DC(J157):DG(I243) DC(J158):DG(I242) DC(J159):DG(I241) DT(J160):DA(I240) DA(J161):DT(I239) DA(J162):DT(I238) DC(J163):DG(I237) DC(J164):DG(I236) DC(J165):DG(I235) DT(J166):DA(I234) DA(J167):DT(I233) DA(J168):DT(I232) DC(J169):DG(I231) DC(J170):DG(I230) DC(J171):DG(I229) DT(J172):DA(I228) DA(J173):DT(I227) DA(J174):DT(I226) DC(J175):DG(I225) DC(J176):DG(I224) DC(J177):DG(I223) DT(J178):DA(I222) DA(J179):DT(I221) DA(J180):DT(I220) DC(J181):DG(I219) DC(J182):DG(I218) DC(J183):DG(I217) DT(J184):DA(I216) DA(J185):DT(I215) DA(J186):DT(I214) DC(J187):DG(I213) DC(J188):DG(I212) DC(J189):DG(I211) DT(J190):DA(I210) DA(J191):DT(I209) DA(J192):DT(I208) DC(J193):DG(I207) DC(J194):DG(I206) DC(J195):DG(I205) DT(J196):DA(I204) DA(J197):DT(I203) DA(J198):DT(I202) DC(J199):DG(I201) DC(J200):DG(I200) DC(J201):DG(I199) DT(J202):DA(I198) DA(J203):DT(I197) DA(J204):DT(I196) DC(J205):DG(I195) DC(J206):DG(I194) DC(J207):DG(I193) DT(J208):DA(I192) DA(J209):DT(I191) DA(J210):DT(I190) DC(J211):DG(I189) DC(J212):DG(I188) DC(J213):DG(I187) DT(J214):DA(I186) DA(J215):DT(I185) DA(J216):DT(I184) DC(J217):DG(I183) DC(J218):DG(I182) DC(J219):DG(I181) DT(J220):DA(I180) DA(J221):DT(I179) DA(J222):DT(I178) DC(J223):DG(I177) DC(J224):DG(I176) DC(J225):DG(I175) DT(J226):DA(I174) DA(J227):DT(I173) DA(J228):DT(I172) DC(J229):DG(I171) DC(J230):DG(I170) DC(J231):DG(I169) DT(J232):DA(I168) DA(J233):DT(I167) DA(J234):DT(I166) DC(J235):DG(I165) DC(J236):DG(I164) DC(J237):DG(I163) DT(J238):DA(I162) DA(J239):DT(I161) DA(J240):DT(I160) DC(J241):DG(I159) DC(J242):DG(I158) DC(J243):DG(I157) DT(J244):DA(I156) DA(J245):DT(I155) DA(J246):DT(I154) DC(J247):DG(I153) DC(J248):DG(I152) DC(J249):DG(I151) DT(J250):DA(I150) DA(J251):DT(I149) DA(J252):DT(I148) DC(J253):DG(I147) DC(J254):DG(I146) DC(J255):DG(I145) DT(J256):DA(I144) DA(J257):DT(I143) DA(J258):DT(I142) DC(J259):DG(I141) DC(J260):DG(I140) DC(J261):DG(I139) DT(J262):DA(I138) DA(J263):DT(I137) DA(J264):DT(I136) DC(J265):DG(I135) DC(J266):DG(I134) DC(J267):DG(I133) DT(J268):DA(I132) DA(J269):DT(I131) DA(J270):DT(I130) DC(J271):DG(I129) DC(J272):DG(I128) DC(J273):DG(I127) DT(J274):DA(I126) DA(J275):DT(I125) DA(J276):DT(I124) DC(J277):DG(I123) DC(J278):DG(I122) DC(J279):DG(I121) DT(J280):DA(I120) DA(J281):DT(I119) DA(J282):DT(I118) DC(J283):DG(I117) DC(J284):DG(I116) DC(J285):DG(I115) DT(J286):DA(I114) DA(J287):DT(I113) DA(J288):DT(I112) DC(J289):DG(I111) DC(J290):DG(I110) DC(J291):DG(I109) DT(J292):DA(I108) DA(J293):DT(I107) DA(J294):DT(I106) DC(J295):DG(I105) DC(J296):DG(I104) DC(J297):DG(I103) DT(J298):DA(I102) DA(J299):DT(I101) DA(J300):DT(I100) DC(J301):DG(I99) DC(J302):DG(I98) DC(J303):DG(I97) DT(J304):DA(I96) DA(J305):DT(I95) DA(J306):DT(I94) DC(J307):DG(I93) DC(J308):DG(I92) DC(J309):DG(I91) DT(J310):DA(I90) DA(J311):DT(I89) DA(J312):DT(I88) DC(J313):DG(I87) DC(J314):DG(I86) DC(J315):DG(I85) DT(J316):DA(I84) DA(J317):DT(I83) DA(J318):DT(I82) DC(J319):DG(I81) DC(J320):DG(I80) DC(J321):DG(I79) DT(J322):DA(I78) DA(J323):DT(I77) DA(J324):DT(I76) DC(J325):DG(I75) DC(J326):DG(I74) DC(J327):DG(I73) DT(J328):DA(I72) DA(J329):DT(I71) DA(J330):DT(I70) DC(J331):DG(I69) DC(J332):DG(I68) DC(J333):DG(I67) DT(J334):DA(I66) DA(J335):DT(I65) DA(J336):DT(I64) DC(J337):DG(I63) DC(J338):DG(I62) DC(J339):DG(I61) DT(J340):DA(I60) DA(J341):DT(I59) DA(J342):DT(I58) DC(J343):DG(I57) DC(J344):DG(I56) DC(J345):DG(I55) DT(J346):DA(I54) DA(J347):DT(I53) DA(J348):DT(I52) DC(J349):DG(I51) DC(J350):DG(I50) DC(J351):DG(I49) DT(J352):DA(I48) DA(J353):DT(I47) DA(J354):DT(I46) DC(J355):DG(I45) DC(J356):DG(I44) DC(J357):DG(I43) DT(J358):DA(I42) DA(J359):DT(I41) DA(J360):DT(I40) DC(J361):DG(I39) DC(J362):DG(I38) DC(J363):DG(I37) DT(J364):DA(I36) DA(J365):DT(I35) DA(J366):DT(I34) DC(J367):DG(I33) DC(J368):DG(I32) DC(J369):DG(I31) DT(J370):DA(I30) DA(J371):DT(I29) DA(J372):DT(I28) DC(J373):DG(I27) DC(J374):DG(I26) DC(J375):DG(I25) DT(J376):DA(I24) DA(J377):DT(I23) DA(J378):DT(I22) DC(J379):DG(I21) DC(J380):DG(I20) DC(J381):DG(I19) DT(J382):DA(I18) DA(J383):DT(I17) DA(J384):DT(I16) DC(J385):DG(I15) DC(J386):DG(I14) DC(J387):DG(I13) DT(J388):DA(I12) DA(J389):DT(I11) DA(J390):DT(I10) DC(J391):DG(I9) DC(J392):DG(I8) DC(J393):DG(I7) DT(J394):DA(I6) DA(J395):DT(I5) DA(J396):DT(I4) DC(J397):DG(I3) DC(J398):DG(I2) DC(J399):DG(I1) chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >7v9k_G:Histone-fold; title=TELOMERIC TETRANUCLEOSOME organism=? DNA sequence DG(I1):DC(J539) DG(I2):DC(J538) DG(I3):DC(J537) DT(I4):DA(J536) DT(I5):DA(J535) DA(I6):DT(J534) DG(I7):DC(J533) DG(I8):DC(J532) DG(I9):DC(J531) DT(I10):DA(J530) DT(I11):DA(J529) DA(I12):DT(J528) DG(I13):DC(J527) DG(I14):DC(J526) DG(I15):DC(J525) DT(I16):DA(J524) DT(I17):DA(J523) DA(I18):DT(J522) DG(I19):DC(J521) DG(I20):DC(J520) DG(I21):DC(J519) DT(I22):DA(J518) DT(I23):DA(J517) DA(I24):DT(J516) DG(I25):DC(J515) DG(I26):DC(J514) DG(I27):DC(J513) DT(I28):DA(J512) DT(I29):DA(J511) DA(I30):DT(J510) DG(I31):DC(J509) DG(I32):DC(J508) DG(I33):DC(J507) DT(I34):DA(J506) DT(I35):DA(J505) DA(I36):DT(J504) DG(I37):DC(J503) DG(I38):DC(J502) DG(I39):DC(J501) DT(I40):DA(J500) DT(I41):DA(J499) DA(I42):DT(J498) DG(I43):DC(J497) DG(I44):DC(J496) DG(I45):DC(J495) DT(I46):DA(J494) DT(I47):DA(J493) DA(I48):DT(J492) DG(I49):DC(J491) DG(I50):DC(J490) DG(I51):DC(J489) DT(I52):DA(J488) DT(I53):DA(J487) DA(I54):DT(J486) DG(I55):DC(J485) DG(I56):DC(J484) DG(I57):DC(J483) DT(I58):DA(J482) DT(I59):DA(J481) DA(I60):DT(J480) DG(I61):DC(J479) DG(I62):DC(J478) DG(I63):DC(J477) DT(I64):DA(J476) DT(I65):DA(J475) DA(I66):DT(J474) DG(I67):DC(J473) DG(I68):DC(J472) DG(I69):DC(J471) DT(I70):DA(J470) DT(I71):DA(J469) DA(I72):DT(J468) DG(I73):DC(J467) DG(I74):DC(J466) DG(I75):DC(J465) DT(I76):DA(J464) DT(I77):DA(J463) DA(I78):DT(J462) DG(I79):DC(J461) DG(I80):DC(J460) DG(I81):DC(J459) DT(I82):DA(J458) DT(I83):DA(J457) DA(I84):DT(J456) DG(I85):DC(J455) DG(I86):DC(J454) DG(I87):DC(J453) DT(I88):DA(J452) DT(I89):DA(J451) DA(I90):DT(J450) DG(I91):DC(J449) DG(I92):DC(J448) DG(I93):DC(J447) DT(I94):DA(J446) DT(I95):DA(J445) DA(I96):DT(J444) DG(I97):DC(J443) DG(I98):DC(J442) DG(I99):DC(J441) DT(I100):DA(J440) DT(I101):DA(J439) DA(I102):DT(J438) DG(I103):DC(J437) DG(I104):DC(J436) DG(I105):DC(J435) DT(I106):DA(J434) DT(I107):DA(J433) DA(I108):DT(J432) DG(I109):DC(J431) DG(I110):DC(J430) DG(I111):DC(J429) DT(I112):DA(J428) DT(I113):DA(J427) DA(I114):DT(J426) DG(I115):DC(J425) DG(I116):DC(J424) DG(I117):DC(J423) DT(I118):DA(J422) DT(I119):DA(J421) DA(I120):DT(J420) DG(I121):DC(J419) DG(I122):DC(J418) DG(I123):DC(J417) DT(I124):DA(J416) DT(I125):DA(J415) DA(I126):DT(J414) DG(I127):DC(J413) DG(I128):DC(J412) DG(I129):DC(J411) DT(I130):DA(J410) DT(I131):DA(J409) DA(I132):DT(J408) DG(I133):DC(J407) DG(I134):DC(J406) DG(I135):DC(J405) DT(I136):DA(J404) DT(I137):DA(J403) DA(I138):DT(J402) DG(I139):DC(J401) DG(I140):DC(J400) DG(I141):DC(J399) DT(I142):DA(J398) DT(I143):DA(J397) DA(I144):DT(J396) DG(I145):DC(J395) DG(I146):DC(J394) DG(I147):DC(J393) DT(I148):DA(J392) DT(I149):DA(J391) DA(I150):DT(J390) DG(I151):DC(J389) DG(I152):DC(J388) DG(I153):DC(J387) DT(I154):DA(J386) DT(I155):DA(J385) DA(I156):DT(J384) DG(I157):DC(J383) DG(I158):DC(J382) DG(I159):DC(J381) DT(I160):DA(J380) DT(I161):DA(J379) DA(I162):DT(J378) DG(I163):DC(J377) DG(I164):DC(J376) DG(I165):DC(J375) DT(I166):DA(J374) DT(I167):DA(J373) DA(I168):DT(J372) DG(I169):DC(J371) DG(I170):DC(J370) DG(I171):DC(J369) DT(I172):DA(J368) DT(I173):DA(J367) DA(I174):DT(J366) DG(I175):DC(J365) DG(I176):DC(J364) DG(I177):DC(J363) DT(I178):DA(J362) DT(I179):DA(J361) DA(I180):DT(J360) DG(I181):DC(J359) DG(I182):DC(J358) DG(I183):DC(J357) DT(I184):DA(J356) DT(I185):DA(J355) DA(I186):DT(J354) DG(I187):DC(J353) DG(I188):DC(J352) DG(I189):DC(J351) DT(I190):DA(J350) DT(I191):DA(J349) DA(I192):DT(J348) DG(I193):DC(J347) DG(I194):DC(J346) DG(I195):DC(J345) DT(I196):DA(J344) DT(I197):DA(J343) DA(I198):DT(J342) DG(I199):DC(J341) DG(I200):DC(J340) DG(I201):DC(J339) DT(I202):DA(J338) DT(I203):DA(J337) DA(I204):DT(J336) DG(I205):DC(J335) DG(I206):DC(J334) DG(I207):DC(J333) DT(I208):DA(J332) DT(I209):DA(J331) DA(I210):DT(J330) DG(I211):DC(J329) DG(I212):DC(J328) DG(I213):DC(J327) DT(I214):DA(J326) DT(I215):DA(J325) DA(I216):DT(J324) DG(I217):DC(J323) DG(I218):DC(J322) DG(I219):DC(J321) DT(I220):DA(J320) DT(I221):DA(J319) DA(I222):DT(J318) DG(I223):DC(J317) DG(I224):DC(J316) DG(I225):DC(J315) DT(I226):DA(J314) DT(I227):DA(J313) DA(I228):DT(J312) DG(I229):DC(J311) DG(I230):DC(J310) DG(I231):DC(J309) DT(I232):DA(J308) DT(I233):DA(J307) DA(I234):DT(J306) DG(I235):DC(J305) DG(I236):DC(J304) DG(I237):DC(J303) DT(I238):DA(J302) DT(I239):DA(J301) DA(I240):DT(J300) DG(I241):DC(J299) DG(I242):DC(J298) DG(I243):DC(J297) DT(I244):DA(J296) DT(I245):DA(J295) DA(I246):DT(J294) DG(I247):DC(J293) DG(I248):DC(J292) DG(I249):DC(J291) DT(I250):DA(J290) DT(I251):DA(J289) DA(I252):DT(J288) DG(I253):DC(J287) DG(I254):DC(J286) DG(I255):DC(J285) DT(I256):DA(J284) DT(I257):DA(J283) DA(I258):DT(J282) DG(I259):DC(J281) DG(I260):DC(J280) DG(I261):DC(J279) DT(I262):DA(J278) DT(I263):DA(J277) DA(I264):DT(J276) DG(I265):DC(J275) DG(I266):DC(J274) DG(I267):DC(J273) DT(I268):DA(J272) DT(I269):DA(J271) DA(I270):DT(J270) DG(I271):DC(J269) DG(I272):DC(J268) DG(I273):DC(J267) DT(I274):DA(J266) DT(I275):DA(J265) DA(I276):DT(J264) DG(I277):DC(J263) DG(I278):DC(J262) DG(I279):DC(J261) DT(I280):DA(J260) DT(I281):DA(J259) DA(I282):DT(J258) DG(I283):DC(J257) DG(I284):DC(J256) DG(I285):DC(J255) DT(I286):DA(J254) DT(I287):DA(J253) DA(I288):DT(J252) DG(I289):DC(J251) DG(I290):DC(J250) DG(I291):DC(J249) DT(I292):DA(J248) DT(I293):DA(J247) DA(I294):DT(J246) DG(I295):DC(J245) DG(I296):DC(J244) DG(I297):DC(J243) DT(I298):DA(J242) DT(I299):DA(J241) DA(I300):DT(J240) DG(I301):DC(J239) DG(I302):DC(J238) DG(I303):DC(J237) DT(I304):DA(J236) DT(I305):DA(J235) DA(I306):DT(J234) DG(I307):DC(J233) DG(I308):DC(J232) DG(I309):DC(J231) DT(I310):DA(J230) DT(I311):DA(J229) DA(I312):DT(J228) DG(I313):DC(J227) DG(I314):DC(J226) DG(I315):DC(J225) DT(I316):DA(J224) DT(I317):DA(J223) DA(I318):DT(J222) DG(I319):DC(J221) DG(I320):DC(J220) DG(I321):DC(J219) DT(I322):DA(J218) DT(I323):DA(J217) DA(I324):DT(J216) DG(I325):DC(J215) DG(I326):DC(J214) DG(I327):DC(J213) DT(I328):DA(J212) DT(I329):DA(J211) DA(I330):DT(J210) DG(I331):DC(J209) DG(I332):DC(J208) DG(I333):DC(J207) DT(I334):DA(J206) DT(I335):DA(J205) DA(I336):DT(J204) DG(I337):DC(J203) DG(I338):DC(J202) DG(I339):DC(J201) DT(I340):DA(J200) DT(I341):DA(J199) DA(I342):DT(J198) DG(I343):DC(J197) DG(I344):DC(J196) DG(I345):DC(J195) DT(I346):DA(J194) DT(I347):DA(J193) DA(I348):DT(J192) DG(I349):DC(J191) DG(I350):DC(J190) DG(I351):DC(J189) DT(I352):DA(J188) DT(I353):DA(J187) DA(I354):DT(J186) DG(I355):DC(J185) DG(I356):DC(J184) DG(I357):DC(J183) DT(I358):DA(J182) DT(I359):DA(J181) DA(I360):DT(J180) DG(I361):DC(J179) DG(I362):DC(J178) DG(I363):DC(J177) DT(I364):DA(J176) DT(I365):DA(J175) DA(I366):DT(J174) DG(I367):DC(J173) DG(I368):DC(J172) DG(I369):DC(J171) DT(I370):DA(J170) DT(I371):DA(J169) DA(I372):DT(J168) DG(I373):DC(J167) DG(I374):DC(J166) DG(I375):DC(J165) DT(I376):DA(J164) DT(I377):DA(J163) DA(I378):DT(J162) DG(I379):DC(J161) DG(I380):DC(J160) DG(I381):DC(J159) DT(I382):DA(J158) DT(I383):DA(J157) DA(I384):DT(J156) DG(I385):DC(J155) DG(I386):DC(J154) DG(I387):DC(J153) DT(I388):DA(J152) DT(I389):DA(J151) DA(I390):DT(J150) DG(I391):DC(J149) DG(I392):DC(J148) DG(I393):DC(J147) DT(I394):DA(J146) DT(I395):DA(J145) DA(I396):DT(J144) DG(I397):DC(J143) DG(I398):DC(J142) DG(I399):DC(J141) DT(I400):DA(J140) DT(I401):DA(J139) DA(I402):DT(J138) DG(I403):DC(J137) DG(I404):DC(J136) DG(I405):DC(J135) DT(I406):DA(J134) DT(I407):DA(J133) DA(I408):DT(J132) DG(I409):DC(J131) DG(I410):DC(J130) DG(I411):DC(J129) DT(I412):DA(J128) DT(I413):DA(J127) DA(I414):DT(J126) DG(I415):DC(J125) DG(I416):DC(J124) DG(I417):DC(J123) DT(I418):DA(J122) DT(I419):DA(J121) DA(I420):DT(J120) DG(I421):DC(J119) DG(I422):DC(J118) DG(I423):DC(J117) DT(I424):DA(J116) DT(I425):DA(J115) DA(I426):DT(J114) DG(I427):DC(J113) DG(I428):DC(J112) DG(I429):DC(J111) DT(I430):DA(J110) DT(I431):DA(J109) DA(I432):DT(J108) DG(I433):DC(J107) DG(I434):DC(J106) DG(I435):DC(J105) DT(I436):DA(J104) DT(I437):DA(J103) DA(I438):DT(J102) DG(I439):DC(J101) DG(I440):DC(J100) DG(I441):DC(J99) DT(I442):DA(J98) DT(I443):DA(J97) DA(I444):DT(J96) DG(I445):DC(J95) DG(I446):DC(J94) DG(I447):DC(J93) DT(I448):DA(J92) DT(I449):DA(J91) DA(I450):DT(J90) DG(I451):DC(J89) DG(I452):DC(J88) DG(I453):DC(J87) DT(I454):DA(J86) DT(I455):DA(J85) DA(I456):DT(J84) DG(I457):DC(J83) DG(I458):DC(J82) DG(I459):DC(J81) DT(I460):DA(J80) DT(I461):DA(J79) DA(I462):DT(J78) DG(I463):DC(J77) DG(I464):DC(J76) DG(I465):DC(J75) DT(I466):DA(J74) DT(I467):DA(J73) DA(I468):DT(J72) DG(I469):DC(J71) DG(I470):DC(J70) DG(I471):DC(J69) DT(I472):DA(J68) DT(I473):DA(J67) DA(I474):DT(J66) DG(I475):DC(J65) DG(I476):DC(J64) DG(I477):DC(J63) DT(I478):DA(J62) DT(I479):DA(J61) DA(I480):DT(J60) DG(I481):DC(J59) DG(I482):DC(J58) DG(I483):DC(J57) DT(I484):DA(J56) DT(I485):DA(J55) DA(I486):DT(J54) DG(I487):DC(J53) DG(I488):DC(J52) DG(I489):DC(J51) DT(I490):DA(J50) DT(I491):DA(J49) DA(I492):DT(J48) DG(I493):DC(J47) DG(I494):DC(J46) DG(I495):DC(J45) DT(I496):DA(J44) DT(I497):DA(J43) DA(I498):DT(J42) DG(I499):DC(J41) DG(I500):DC(J40) DG(I501):DC(J39) DT(I502):DA(J38) DT(I503):DA(J37) DA(I504):DT(J36) DG(I505):DC(J35) DG(I506):DC(J34) DG(I507):DC(J33) DT(I508):DA(J32) DT(I509):DA(J31) DA(I510):DT(J30) DG(I511):DC(J29) DG(I512):DC(J28) DG(I513):DC(J27) DT(I514):DA(J26) DT(I515):DA(J25) DA(I516):DT(J24) DG(I517):DC(J23) DG(I518):DC(J22) DG(I519):DC(J21) DT(I520):DA(J20) DT(I521):DA(J19) DA(I522):DT(J18) DG(I523):DC(J17) DG(I524):DC(J16) DG(I525):DC(J15) DT(I526):DA(J14) DT(I527):DA(J13) DA(I528):DT(J12) DG(I529):DC(J11) DG(I530):DC(J10) DG(I531):DC(J9) DT(I532):DA(J8) DT(I533):DA(J7) DA(I534):DT(J6) DG(I535):DC(J5) DG(I536):DC(J4) DG(I537):DC(J3) DT(I538):DA(J2) DT(I539):DA(J1) chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) HIS124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkteshHkakgk >7v9s_Z:Histone-fold; title=TELOMERIC TRINUCLEOSOME IN OPEN STATE organism=? DNA sequence DG(I1):DC(J393) DG(I2):DC(J392) DG(I3):DC(J391) DT(I4):DA(J390) DT(I5):DA(J389) DA(I6):DT(J388) DG(I7):DC(J387) DG(I8):DC(J386) DG(I9):DC(J385) DT(I10):DA(J384) DT(I11):DA(J383) DA(I12):DT(J382) DG(I13):DC(J381) DG(I14):DC(J380) DG(I15):DC(J379) DT(I16):DA(J378) DT(I17):DA(J377) DA(I18):DT(J376) DG(I19):DC(J375) DG(I20):DC(J374) DG(I21):DC(J373) DT(I22):DA(J372) DT(I23):DA(J371) DA(I24):DT(J370) DG(I25):DC(J369) DG(I26):DC(J368) DG(I27):DC(J367) DT(I28):DA(J366) DT(I29):DA(J365) DA(I30):DT(J364) DG(I31):DC(J363) DG(I32):DC(J362) DG(I33):DC(J361) DT(I34):DA(J360) DT(I35):DA(J359) DA(I36):DT(J358) DG(I37):DC(J357) DG(I38):DC(J356) DG(I39):DC(J355) DT(I40):DA(J354) DT(I41):DA(J353) DA(I42):DT(J352) DG(I43):DC(J351) DG(I44):DC(J350) DG(I45):DC(J349) DT(I46):DA(J348) DT(I47):DA(J347) DA(I48):DT(J346) DG(I49):DC(J345) DG(I50):DC(J344) DG(I51):DC(J343) DT(I52):DA(J342) DT(I53):DA(J341) DA(I54):DT(J340) DG(I55):DC(J339) DG(I56):DC(J338) DG(I57):DC(J337) DT(I58):DA(J336) DT(I59):DA(J335) DA(I60):DT(J334) DG(I61):DC(J333) DG(I62):DC(J332) DG(I63):DC(J331) DT(I64):DA(J330) DT(I65):DA(J329) DA(I66):DT(J328) DG(I67):DC(J327) DG(I68):DC(J326) DG(I69):DC(J325) DT(I70):DA(J324) DT(I71):DA(J323) DA(I72):DT(J322) DG(I73):DC(J321) DG(I74):DC(J320) DG(I75):DC(J319) DT(I76):DA(J318) DT(I77):DA(J317) DA(I78):DT(J316) DG(I79):DC(J315) DG(I80):DC(J314) DG(I81):DC(J313) DT(I82):DA(J312) DT(I83):DA(J311) DA(I84):DT(J310) DG(I85):DC(J309) DG(I86):DC(J308) DG(I87):DC(J307) DT(I88):DA(J306) DT(I89):DA(J305) DA(I90):DT(J304) DG(I91):DC(J303) DG(I92):DC(J302) DG(I93):DC(J301) DT(I94):DA(J300) DT(I95):DA(J299) DA(I96):DT(J298) DG(I97):DC(J297) DG(I98):DC(J296) DG(I99):DC(J295) DT(I100):DA(J294) DT(I101):DA(J293) DA(I102):DT(J292) DG(I103):DC(J291) DG(I104):DC(J290) DG(I105):DC(J289) DT(I106):DA(J288) DT(I107):DA(J287) DA(I108):DT(J286) DG(I109):DC(J285) DG(I110):DC(J284) DG(I111):DC(J283) DT(I112):DA(J282) DT(I113):DA(J281) DA(I114):DT(J280) DG(I115):DC(J279) DG(I116):DC(J278) DG(I117):DC(J277) DT(I118):DA(J276) DT(I119):DA(J275) DA(I120):DT(J274) DG(I121):DC(J273) DG(I122):DC(J272) DG(I123):DC(J271) DT(I124):DA(J270) DT(I125):DA(J269) DA(I126):DT(J268) DG(I127):DC(J267) DG(I128):DC(J266) DG(I129):DC(J265) DT(I130):DA(J264) DT(I131):DA(J263) DA(I132):DT(J262) DG(I133):DC(J261) DG(I134):DC(J260) DG(I135):DC(J259) DT(I136):DA(J258) DT(I137):DA(J257) DA(I138):DT(J256) DG(I139):DC(J255) DG(I140):DC(J254) DG(I141):DC(J253) DT(I142):DA(J252) DT(I143):DA(J251) DA(I144):DT(J250) DG(I145):DC(J249) DG(I146):DC(J248) DG(I147):DC(J247) DT(I148):DA(J246) DT(I149):DA(J245) DA(I150):DT(J244) DG(I151):DC(J243) DG(I152):DC(J242) DG(I153):DC(J241) DT(I154):DA(J240) DT(I155):DA(J239) DA(I156):DT(J238) DG(I157):DC(J237) DG(I158):DC(J236) DG(I159):DC(J235) DT(I160):DA(J234) DT(I161):DA(J233) DA(I162):DT(J232) DG(I163):DC(J231) DG(I164):DC(J230) DG(I165):DC(J229) DT(I166):DA(J228) DT(I167):DA(J227) DA(I168):DT(J226) DG(I169):DC(J225) DG(I170):DC(J224) DG(I171):DC(J223) DT(I172):DA(J222) DT(I173):DA(J221) DA(I174):DT(J220) DG(I175):DC(J219) DG(I176):DC(J218) DG(I177):DC(J217) DT(I178):DA(J216) DT(I179):DA(J215) DA(I180):DT(J214) DG(I181):DC(J213) DG(I182):DC(J212) DG(I183):DC(J211) DT(I184):DA(J210) DT(I185):DA(J209) DA(I186):DT(J208) DG(I187):DC(J207) DG(I188):DC(J206) DG(I189):DC(J205) DT(I190):DA(J204) DT(I191):DA(J203) DA(I192):DT(J202) DG(I193):DC(J201) DG(I194):DC(J200) DG(I195):DC(J199) DT(I196):DA(J198) DT(I197):DA(J197) DA(I198):DT(J196) DG(I199):DC(J195) DG(I200):DC(J194) DG(I201):DC(J193) DT(I203):DA(J192) DA(I204):DT(J190) DG(I205):DC(J189) DG(I206):DC(J188) DG(I207):DC(J187) DT(I208):DA(J186) DT(I209):DA(J185) DA(I210):DT(J184) DG(I211):DC(J183) DG(I212):DC(J182) DG(I213):DC(J181) DT(I214):DA(J180) DT(I215):DA(J179) DA(I216):DT(J178) DG(I217):DC(J177) DG(I218):DC(J176) DG(I219):DC(J175) DT(I220):DA(J174) DT(I221):DA(J173) DA(I222):DT(J172) DG(I223):DC(J171) DG(I224):DC(J170) DG(I225):DC(J169) DT(I226):DA(J168) DT(I227):DA(J167) DA(I228):DT(J166) DG(I229):DC(J165) DG(I230):DC(J164) DG(I231):DC(J163) DT(I232):DA(J162) DT(I233):DA(J161) DA(I234):DT(J160) DG(I235):DC(J159) DG(I236):DC(J158) DG(I237):DC(J157) DT(I238):DA(J156) DT(I239):DA(J155) DA(I240):DT(J154) DG(I241):DC(J153) DG(I242):DC(J152) DG(I243):DC(J151) DT(I244):DA(J150) DT(I245):DA(J149) DA(I246):DT(J148) DG(I247):DC(J147) DG(I248):DC(J146) DG(I249):DC(J145) DT(I250):DA(J144) DT(I251):DA(J143) DA(I252):DT(J142) DG(I253):DC(J141) DG(I254):DC(J140) DG(I255):DC(J139) DT(I256):DA(J138) DT(I257):DA(J137) DA(I258):DT(J136) DG(I259):DC(J135) DG(I260):DC(J134) DG(I261):DC(J133) DT(I262):DA(J132) DT(I263):DA(J131) DA(I264):DT(J130) DG(I265):DC(J129) DG(I266):DC(J128) DG(I267):DC(J127) DT(I268):DA(J126) DT(I269):DA(J125) DA(I270):DT(J124) DG(I271):DC(J123) DG(I272):DC(J122) DG(I273):DC(J121) DT(I274):DA(J120) DA(I276):DT(J118) DG(I277):DC(J117) DG(I278):DC(J116) DG(I279):DC(J115) DT(I280):DA(J114) DT(I281):DA(J113) DA(I282):DT(J112) DG(I283):DC(J111) DG(I284):DC(J110) DG(I285):DC(J109) DT(I286):DA(J108) DT(I287):DA(J107) DA(I288):DT(J106) DG(I289):DC(J105) DG(I290):DC(J104) DG(I291):DC(J103) DT(I292):DA(J102) DT(I293):DA(J101) DA(I294):DT(J100) DG(I295):DC(J99) DG(I296):DC(J98) DG(I297):DC(J97) DT(I298):DA(J96) DT(I299):DA(J95) DA(I300):DT(J94) DG(I301):DC(J93) DG(I302):DC(J92) DG(I303):DC(J91) DT(I304):DA(J90) DT(I305):DA(J89) DA(I306):DT(J88) DG(I307):DC(J87) DG(I308):DC(J86) DG(I309):DC(J85) DT(I310):DA(J84) DT(I311):DA(J83) DA(I312):DT(J82) DG(I313):DC(J81) DG(I314):DC(J80) DG(I315):DC(J79) DT(I316):DA(J78) DT(I317):DA(J77) DA(I318):DT(J76) DG(I319):DC(J75) DG(I320):DC(J74) DG(I321):DC(J73) DT(I322):DA(J72) DT(I323):DA(J71) DA(I324):DT(J70) DG(I325):DC(J69) DG(I326):DC(J68) DG(I327):DC(J67) DT(I328):DA(J66) DT(I329):DA(J65) DA(I330):DT(J64) DG(I331):DC(J63) DG(I332):DC(J62) DG(I333):DC(J61) DT(I334):DA(J60) DT(I335):DA(J59) DA(I336):DT(J58) DG(I337):DC(J57) DG(I338):DC(J56) DG(I339):DC(J55) DT(I340):DA(J54) DT(I341):DA(J53) DA(I342):DT(J52) DG(I343):DC(J51) DG(I344):DC(J50) DG(I345):DC(J49) DT(I346):DA(J48) DT(I347):DA(J47) DA(I348):DT(J46) DG(I349):DC(J45) DG(I350):DC(J44) DG(I351):DC(J43) DT(I352):DA(J42) DT(I353):DA(J41) DA(I354):DT(J40) DG(I355):DC(J39) DG(I356):DC(J38) DG(I357):DC(J37) DT(I358):DA(J36) DT(I359):DA(J35) DA(I360):DT(J34) DG(I361):DC(J33) DG(I362):DC(J32) DG(I363):DC(J31) DT(I364):DA(J30) DT(I365):DA(J29) DA(I366):DT(J28) DG(I367):DC(J27) DG(I368):DC(J26) DG(I369):DC(J25) DT(I370):DA(J24) DT(I371):DA(J23) DA(I372):DT(J22) DG(I373):DC(J21) DG(I374):DC(J20) DG(I375):DC(J19) DT(I376):DA(J18) DT(I377):DA(J17) DA(I378):DT(J16) DG(I379):DC(J15) DG(I380):DC(J14) DG(I381):DC(J13) DT(I382):DA(J12) DT(I383):DA(J11) DA(I384):DT(J10) DG(I385):DC(J9) DG(I386):DC(J8) DG(I387):DC(J7) DT(I388):DA(J6) chainZ ( 7) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkrkrsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkRstitsreiqtavrlllpgelakhavsegtkavtkytsa >7vba_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURE OF THE PRE STATE HUMAN RNA POLYMERASE I ELONGATION COMPLEX organism=? DNA sequence DG(T-11):DC(U12) DC(T-10):DG(U11) DC(T-9):DG(U10) DA(T-8):DT(U9) DG(T-7):DC(U8) DA(T-6):DT(U7) DG(T-5):DC(U6) DA(T-4):DC(U5) DC(T-3):DT(U4) DA(T-2):DG(U3) DG(T-1):DT(U2) DC(T0):DC(U1) chainA (181) LYS197 0 0 0 0 0 1 0 0 0 0 0 0 (1414) PHE1660 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence nmpwrrlqgisfgmysaeelkklsvksitnpryldslgnpsanglydlalgpadskevcstcvqdfsncsghlghielpltvynpllfdklylllrgsclnchmltcpravihlllcqlrvlevgalqavyelerilnrfireeleqytteivqnnllgsqgahvknvcesksklialfwKahmnakrcphcktgrsvvrkehnskltitfrgyltptsarehlsalwknegfflnylfsrfnpsvffldflvvppsryrpvsrlgdqmftngqtvnlqavmkdvvlirkllalmaqeqslidklyniwirlqshvnivfdsemdklmmdkypgirqilekkeglfrkhmmgkrvdyaarsvicpdmyintneigipmvfatkltypqpvtpwnvqelrqavingpnvhpgasmvinedgsrtalsavdmtqreavakqlltqgtkivcrhvkngdilllnrqptlhrpsiqahrarilpeekvlrlhyanckaynadfdgdemnahfpqselgraeayvlactdqqylvpkdgqplagliqdhmvsgasmttrgcfftrehymelvyrgltdkvgrvkllspsilkpfplwtgkqvvstlliniipedhiplnlsgkakitgkawvketprsvpgfnpdsmcesqviiregellcgvldkahygssayglvhccyeiyggetsgkvltclarlftaylqlyrgftlgvedilvkpkadvkrqriieesthcgpqavraalnlpeaasydevrgkwqdahlgkdqrdfnmidlkfkeevnhysneinkacmpfglhrqfpenslqmmvqsgakgstvntmqiscllgqielegrrpplmasgkslpcfepyeftpraggfvtgrfltgikppefffhcmagreglvdtavktsrsgylqrciikhleglvvqydltvrdsdgsvvqflygedgldipktqflqpkqfpflasnyevimksqhlhevlsradpkkalhhfraikkwqskhpntllrrgaflsysqkiqeavkalklesenrngrspgtqemlrmwyeldeesrrkyqkkaaacpdpslsvwrpdiyfasvsetfetkvddysqewaaqteksyekselsldrlrtllqlkwqrslcepgeavgllaaqsigepstqmmnvtlgiprlreilmvasaniktpmmsvpvlntkkalkrvkslkkqltrvclgevlqkidvqeqvyqlrfqflphayyqqekclrpedilrfmetrffkllmesikkknnkaseamerrvqavreihpfiddyqydteeslwcqvtvklplmkinfdmsslvvslahgaviyatkgitrcllnettnnknekelvlnteginlpelfkyaevldlrrlysndihaiantygieaalrviekeikdvfavygiavdprhlslvadymcfegvykplnrFgirsnssplqqmtfetsfqflkqatmlgshdelrspsaclvvgkvvrggtglfelkqpl >7vba_AB: title=STRUCTURE OF THE PRE STATE HUMAN RNA POLYMERASE I ELONGATION COMPLEX organism=? DNA sequence DC(U1):DG(T-1) DT(U2):DA(T-2) DG(U3):DC(T-3) DT(U4):DA(T-4) DC(U5):DG(T-5) DC(U6):DA(T-6) DT(U7):DG(T-7) DC(U8):DA(T-8) DT(U9):DC(T-9) DG(U10):DC(T-10) DG(U11):DG(T-11) chainA (181) LYS197 0 0 0 0 0 0 1 0 0 0 0 (1414) PHE1660 0 0 0 2 0 0 0 0 0 0 0 chainB (478) ARG482 20 0 0 0 0 0 0 0 0 0 0 prot.sequence nmpwrrlqgisfgmysaeelkklsvksitnpryldslgnpsanglydlalgpadskevcstcvqdfsncsghlghielpltvynpllfdklylllrgsclnchmltcpravihlllcqlrvlevgalqavyelerilnrfireeleqytteivqnnllgsqgahvknvcesksklialfwKahmnakrcphcktgrsvvrkehnskltitfrgyltptsarehlsalwknegfflnylfsrfnpsvffldflvvppsryrpvsrlgdqmftngqtvnlqavmkdvvlirkllalmaqeqslidklyniwirlqshvnivfdsemdklmmdkypgirqilekkeglfrkhmmgkrvdyaarsvicpdmyintneigipmvfatkltypqpvtpwnvqelrqavingpnvhpgasmvinedgsrtalsavdmtqreavakqlltqgtkivcrhvkngdilllnrqptlhrpsiqahrarilpeekvlrlhyanckaynadfdgdemnahfpqselgraeayvlactdqqylvpkdgqplagliqdhmvsgasmttrgcfftrehymelvyrgltdkvgrvkllspsilkpfplwtgkqvvstlliniipedhiplnlsgkakitgkawvketprsvpgfnpdsmcesqviiregellcgvldkahygssayglvhccyeiyggetsgkvltclarlftaylqlyrgftlgvedilvkpkadvkrqriieesthcgpqavraalnlpeaasydevrgkwqdahlgkdqrdfnmidlkfkeevnhysneinkacmpfglhrqfpenslqmmvqsgakgstvntmqiscllgqielegrrpplmasgkslpcfepyeftpraggfvtgrfltgikppefffhcmagreglvdtavktsrsgylqrciikhleglvvqydltvrdsdgsvvqflygedgldipktqflqpkqfpflasnyevimksqhlhevlsradpkkalhhfraikkwqskhpntllrrgaflsysqkiqeavkalklesenrngrspgtqemlrmwyeldeesrrkyqkkaaacpdpslsvwrpdiyfasvsetfetkvddysqewaaqteksyekselsldrlrtllqlkwqrslcepgeavgllaaqsigepstqmmnvtlgiprlreilmvasaniktpmmsvpvlntkkalkrvkslkkqltrvclgevlqkidvqeqvyqlrfqflphayyqqekclrpedilrfmetrffkllmesikkknnkaseamerrvqavreihpfiddyqydteeslwcqvtvklplmkinfdmsslvvslahgaviyatkgitrcllnettnnknekelvlnteginlpelfkyaevldlrrlysndihaiantygieaalrviekeikdvfavygiavdprhlslvadymcfegvykplnrFgirsnssplqqmtfetsfqflkqatmlgshdelrspsaclvvgkvvrggtglfelkqpl/srwrnlpsgpslkhltdpsygipreqqkaalqeltrahvesfnyavheglglavqaippfefafkderisftildavispptvpkgtickeanvypaecrgrrstyrgkltadinwavngiskgiikqflgyvpimvksklcnlrnlppqaliehheeaeemggyfiingiekvirmlimprrnfpiamirpkwktrgpgytqygvsmhcvreehsavnmnlhylengtvmlnfiyrkelfflplgfalkalvsfsdyqifqelikgkeddsflrnsvsqmlrivmeegcstqkqvlnylgecfrvklnvpdwypneqaaeflfnqcicihlksntekfymlclmtrklfalakgecmednpdslvnqevltpgqlflmflkeklegwlvsikiafdkkaqktsvsmntdnlmriftmgidltkpfeylfatgnlrsktglgllqdsglcvvadklnfirylshfrcvhrgadfakmRtttvrrllpeswgflcpvhtpdgepcglmnhltavcevvtqfvytasipallcnlgvtpidgaphrsysecypvlldgvmvgwvdkdlapgiadslrhfkvlrekrippwmevvlipmtgkpslypglflfttpcrlvrpvqnlalgkeeligtmeqifmnvaifedevfagvtthqelfphsllsvianfipfsdhnqsprnmyqcqmgkqtmgfplltyqdrsdnklyrlqtpqsplvrpsmydyydmdnypigtnaivavisytgydmedamivnkaswergfahgsvyksefidlsekikqgdsslvfgikpgdprvlqkldddglpfigaklqygdpyysylnlntgesfvmyykskencvvdnikvcsndtgsgkfkcvcitmrvprnptigdkfasrhgqkgilsrlwpaedmpftesgmvpdilfnphgfpsrmtigmliesmagksaalhglchdatpfifseensaleyfgemlkaagynfygterlysgisgleleadifigvvyyqrlrhmvsdkfqvrttgardrvtnqpiggrnvqggirfgemerdallahgtsfllhdrlfncsdrsvahvcvkcgsllspllekpnrkynctlcsrsdtidtvsvpyvfryfvaelaamnikvkldvv >7vbb_AB: title=STRUCTURE OF THE POST STATE HUMAN RNA POLYMERASE I ELONGATION COMPLEX organism=? DNA sequence DT(T1):DA(U14) DC(T2):DG(U13) DG(T3):DC(U12) DC(T4):DG(U11) DC(T5):DG(U10) DA(T6):DT(U9) DG(T7):DC(U8) DA(T8):DT(U7) DG(T9):DC(U6) DG(T10):DC(U5) DA(T11):DT(U4) DC(T12):DG(U3) DA(T13):DT(U2) DG(T14):DC(U1) chainA (181) LYS197 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (1413) ARG1659 0 0 0 0 0 0 0 0 0 0 0 1 0 0 chainB (478) ARG482 0 0 0 0 0 0 0 0 0 0 0 0 0 22 prot.sequence nmpwrrlqgisfgmysaeelkklsvksitnpryldslgnpsanglydlalgpadskevcstcvqdfsncsghlghielpltvynpllfdklylllrgsclnchmltcpravihlllcqlrvlevgalqavyelerilnrfireeleqytteivqnnllgsqgahvknvcesksklialfwKahmnakrcphcktgrsvvrkehnskltitfrgyltptsarehlsalwknegfflnylfsrfnpsvffldflvvppsryrpvsrlgdqmftngqtvnlqavmkdvvlirkllalmaqeqslidklyniwirlqshvnivfdsemdklmmdkypgirqilekkeglfrkhmmgkrvdyaarsvicpdmyintneigipmvfatkltypqpvtpwnvqelrqavingpnvhpgasmvinedgsrtalsavdmtqreavakqlltqgtkivcrhvkngdilllnrqptlhrpsiqahrarilpeekvlrlhyanckaynadfdgdemnahfpqselgraeayvlactdqqylvpkdgqplagliqdhmvsgasmttrgcfftrehymelvyrgltdkvgrvkllspsilkpfplwtgkqvvstlliniipedhiplnlsgkakitgkawvketprsvpgfnpdsmcesqviiregellcgvldkahygssayglvhccyeiyggetsgkvltclarlftaylqlyrgftlgvedilvkpkadvkrqriieesthcgpqavraalnlpeaasydevrgkwqdahlgkdqrdfnmidlkfkeevnhysneinkacmpfglhrqfpenslqmmvqsgakgstvntmqiscllgqielegrrpplmasgkslpcfepyeftpraggfvtgrfltgikppefffhcmagreglvdtavktsrsgylqrciikhleglvvqydltvrdsdgsvvqflygedgldipktqflqpkqfpflasnyevimksqhlhevlsradpkkalhhfraikkwqskhpntllrrgaflsysqkiqeavkalklesenrngrspgtqemlrmwyeldeesrrkyqkkaaacpdpslsvwrpdiyfasvsetfetkvddysqewaaqteksyekselsldrlrtllqlkwqrslcepgeavgllaaqsigepstqmmnvtlgiprlreilmvasaniktpmmsvpvlntkkalkrvkslkkqltrvclgevlqkidvqeqvyqlrfqflphayyqqekclrpedilrfmetrffkllmesikkknnkaseamerrvqavreihpfiddyqydteeslwcqvtvklplmkinfdmsslvvslahgaviyatkgitrcllnettnnknekelvlnteginlpelfkyaevldlrrlysndihaiantygieaalrviekeikdvfavygiavdprhlslvadymcfegvykplnRfgirsnssplqqmtfetsfqflkqatmlgshdelrspsaclvvgkvvrggtglfelkqpl/srwrnlpsgpslkhltdpsygipreqqkaalqeltrahvesfnyavheglglavqaippfefafkderisftildavispptvpkgtickeanvypaecrgrrstyrgkltadinwavngiskgiikqflgyvpimvksklcnlrnlppqaliehheeaeemggyfiingiekvirmlimprrnfpiamirpkwktrgpgytqygvsmhcvreehsavnmnlhylengtvmlnfiyrkelfflplgfalkalvsfsdyqifqelikgkeddsflrnsvsqmlrivmeegcstqkqvlnylgecfrvklnvpdwypneqaaeflfnqcicihlksntekfymlclmtrklfalakgecmednpdslvnqevltpgqlflmflkeklegwlvsikiafdkkaqktsvsmntdnlmriftmgidltkpfeylfatgnlrsktglgllqdsglcvvadklnfirylshfrcvhrgadfakmRtttvrrllpeswgflcpvhtpdgepcglmnhltavcevvtqfvytasipallcnlgvtpidgaphrsysecypvlldgvmvgwvdkdlapgiadslrhfkvlrekrippwmevvlipmtgkpslypglflfttpcrlvrpvqnlalgkeeligtmeqifmnvaifedevfagvtthqelfphsllsvianfipfsdhnqsprnmyqcqmgkqtmgfplltyqdrsdnklyrlqtpqsplvrpsmydyydmdnypigtnaivavisytgydmedamivnkaswergfahgsvyksefidlsekikqgdsslvfgikpgdprvlqkldddglpfigaklqygdpyysylnlntgesfvmyykskencvvdnikvcsndtgsgkfkcvcitmrvprnptigdkfasrhgqkgilsrlwpaedmpftesgmvpdilfnphgfpsrmtigmliesmagksaalhglchdatpfifseensaleyfgemlkaagynfygterlysgisgleleadifigvvyyqrlrhmvsdkfqvrttgardrvtnqpiggrnvqggirfgemerdallahgtsfllhdrlfncsdrsvahvcvkcgsllspllekpnrkynctlcsrsdtidtvsvpyvfryfvaelaamnikvkldvv >7vbc_AB: title=BACK TRACK STATE OF HUMAN RNA POLYMERASE I ELONGATION COMPLEX organism=? DNA sequence DG(U1):DT(T0) DT(U2):DG(T-1) DA(U3):DC(T-2) DC(U4):DG(T-3) DT(U5):DA(T-4) DG(U6):DC(T-5) DT(U7):DA(T-6) DC(U8):DG(T-7) DC(U9):DG(T-8) DT(U10):DA(T-9) chainA (185) LYS197 0 0 0 0 0 0 2 1 0 0 (345) LYS423 1 0 0 0 0 0 0 0 0 0 (901) TYR987 1 0 0 0 0 0 0 0 0 0 (1417) ARG1659 0 0 1 0 0 0 0 0 0 0 chainB (478) ARG482 6 0 0 0 0 0 0 0 0 0 prot.sequence nmpwrrlqgisfgmysaeelkklsvksitnpryldslgnpsanglydlalgpadskevcstcvqdfsncsghlghielpltvynpllfdklylllrgsclnchmltcpravihlllcqlrvlevgalqavyelerilnrfsaseireeleqytteivqnnllgsqgahvknvcesksklialfwKahmnakrcphcktgrsvvrkehnskltitfrgyltptsarehlsalwknegfflnylfsrfnpsvffldflvvppsryrpvsrlgdqmftngqtvnlqavmkdvvlirkllalmaqeqslidklyniwirlqshvnivfdsemdklmmdkypgirqileKkeglfrkhmmgkrvdyaarsvicpdmyintneigipmvfatkltypqpvtpwnvqelrqavingpnvhpgasmvinedgsrtalsavdmtqreavakqlltqgtkivcrhvkngdilllnrqptlhrpsiqahrarilpeekvlrlhyanckaynadfdgdemnahfpqselgraeayvlactdqqylvpkdgqplagliqdhmvsgasmttrgcfftrehymelvyrgltdkvgrvkllspsilkpfplwtgkqvvstlliniipedhiplnlsgkakitgkawvketprsvpgfnpdsmcesqviiregellcgvldkahygssayglvhccyeiyggetsgkvltclarlftaylqlyrgftlgvedilvkpkadvkrqriieesthcgpqavraalnlpeaasydevrgkwqdahlgkdqrdfnmidlkfkeevnhysneinkacmpfglhrqfpenslqmmvqsgakgstvntmqiscllgqielegrrpplmasgkslpcfepyeftpraggfvtgrfltgikppefffhcmagreglvdtavktsrsgYlqrciikhleglvvqydltvrdsdgsvvqflygedgldipktqflqpkqfpflasnyevimksqhlhevlsradpkkalhhfraikkwqskhpntllrrgaflsysqkiqeavkalklesenrngrspgtqemlrmwyeldeesrrkyqkkaaacpdpslsvwrpdiyfasvsetfetkvddysqewaaqteksyekselsldrlrtllqlkwqrslcepgeavgllaaqsigepstqmmnvtlgiprlreilmvasaniktpmmsvpvlntkkalkrvkslkkqltrvclgevlqkidvqeqvyqlrfqflphayyqqekclrpedilrfmetrffkllmesikkknnkaseamerrvqavreihpfiddyqydteeslwcqvtvklplmkinfdmsslvvslahgaviyatkgitrcllnettnnknekelvlnteginlpelfkyaevldlrrlysndihaiantygieaalrviekeikdvfavygiavdprhlslvadymcfegvykplnRfgirsnssplqqmtfetsfqflkqatmlgshdelrspsaclvvgkvvrggtglfelkqpl/srwrnlpsgpslkhltdpsygipreqqkaalqeltrahvesfnyavheglglavqaippfefafkderisftildavispptvpkgtickeanvypaecrgrrstyrgkltadinwavngiskgiikqflgyvpimvksklcnlrnlppqaliehheeaeemggyfiingiekvirmlimprrnfpiamirpkwktrgpgytqygvsmhcvreehsavnmnlhylengtvmlnfiyrkelfflplgfalkalvsfsdyqifqelikgkeddsflrnsvsqmlrivmeegcstqkqvlnylgecfrvklnvpdwypneqaaeflfnqcicihlksntekfymlclmtrklfalakgecmednpdslvnqevltpgqlflmflkeklegwlvsikiafdkkaqktsvsmntdnlmriftmgidltkpfeylfatgnlrsktglgllqdsglcvvadklnfirylshfrcvhrgadfakmRtttvrrllpeswgflcpvhtpdgepcglmnhltavcevvtqfvytasipallcnlgvtpidgaphrsysecypvlldgvmvgwvdkdlapgiadslrhfkvlrekrippwmevvlipmtgkpslypglflfttpcrlvrpvqnlalgkeeligtmeqifmnvaifedevfagvtthqelfphsllsvianfipfsdhnqsprnmyqcqmgkqtmgfplltyqdrsdnklyrlqtpqsplvrpsmydyydmdnypigtnaivavisytgydmedamivnkaswergfahgsvyksefidlsekikqgdsslvfgikpgdprvlqkldddglpfigaklqygdpyysylnlntgesfvmyykskencvvdnikvcsndtgsgkfkcvcitmrvprnptigdkfasrhgqkgilsrlwpaedmpftesgmvpdilfnphgfpsrmtigmliesmagksaalhglchdatpfifseensaleyfgemlkaagynfygterlysgisgleleadifigvvyyqrlrhmvsdkfqvrttgardrvtnqpiggrnvqggirfgemerdallahgtsfllhdrlfncsdrsvahvcvkcgsllspllekpnrkynctlcsrsdtidtvsvpyvfryfvaelaamnikvkldvv >7vbc_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=BACK TRACK STATE OF HUMAN RNA POLYMERASE I ELONGATION COMPLEX organism=? DNA sequence DG(U1):DT(T0) DT(U2):DG(T-1) DA(U3):DC(T-2) DC(U4):DG(T-3) DT(U5):DA(T-4) DG(U6):DC(T-5) DT(U7):DA(T-6) DC(U8):DG(T-7) DC(U9):DG(T-8) DT(U10):DA(T-9) chainB (478) ARG482 6 0 0 0 0 0 0 0 0 0 prot.sequence srwrnlpsgpslkhltdpsygipreqqkaalqeltrahvesfnyavheglglavqaippfefafkderisftildavispptvpkgtickeanvypaecrgrrstyrgkltadinwavngiskgiikqflgyvpimvksklcnlrnlppqaliehheeaeemggyfiingiekvirmlimprrnfpiamirpkwktrgpgytqygvsmhcvreehsavnmnlhylengtvmlnfiyrkelfflplgfalkalvsfsdyqifqelikgkeddsflrnsvsqmlrivmeegcstqkqvlnylgecfrvklnvpdwypneqaaeflfnqcicihlksntekfymlclmtrklfalakgecmednpdslvnqevltpgqlflmflkeklegwlvsikiafdkkaqktsvsmntdnlmriftmgidltkpfeylfatgnlrsktglgllqdsglcvvadklnfirylshfrcvhrgadfakmRtttvrrllpeswgflcpvhtpdgepcglmnhltavcevvtqfvytasipallcnlgvtpidgaphrsysecypvlldgvmvgwvdkdlapgiadslrhfkvlrekrippwmevvlipmtgkpslypglflfttpcrlvrpvqnlalgkeeligtmeqifmnvaifedevfagvtthqelfphsllsvianfipfsdhnqsprnmyqcqmgkqtmgfplltyqdrsdnklyrlqtpqsplvrpsmydyydmdnypigtnaivavisytgydmedamivnkaswergfahgsvyksefidlsekikqgdsslvfgikpgdprvlqkldddglpfigaklqygdpyysylnlntgesfvmyykskencvvdnikvcsndtgsgkfkcvcitmrvprnptigdkfasrhgqkgilsrlwpaedmpftesgmvpdilfnphgfpsrmtigmliesmagksaalhglchdatpfifseensaleyfgemlkaagynfygterlysgisgleleadifigvvyyqrlrhmvsdkfqvrttgardrvtnqpiggrnvqggirfgemerdallahgtsfllhdrlfncsdrsvahvcvkcgsllspllekpnrkynctlcsrsdtidtvsvpyvfryfvaelaamnikvkldvv >7vbm_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=THE MOUSE NUCLEOSOME STRUCTURE CONTAINING H3MM18 AIDED BY PL2-6 SCFV organism=MUS MUSCULUS DNA sequence DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-40):DC(J41) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) chainA chainB chainC chainD ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 10) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lirklpfqrlvleiaqdfktdlcfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdtqlagyicr/kvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/trssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggv/Rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytss/kssellirkLpfqrlvleiaqdfktdlcfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdtqlagyicr/niqgitkpaIrrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aktrssragLqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqgg/Rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytss >7ve5_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=C-TERMINAL DOMAIN OF VRAR organism=Staphylococcus aureus DNA sequence DA(C1):DT(D19) DG(C2):DC(D18) DA(C3):DT(D17) DC(C4):DG(D16) DT(C5):DA(D15) DA(C6):DT(D14) DA(C7):DT(D13) DA(C8):DT(D12) DG(C9):DC(D11) DT(C10):DA(D10) DA(C11):DT(D9) DT(C12):DA(D8) DG(C13):DC(D7) DA(C14):DT(D6) DA(C15):DT(D5) DC(C16):DG(D4) DA(C17):DT(D3) DT(C18):DA(D2) DC(C19):DG(D1) chainA ( 35) LYS177 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS180 0 0 5 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) THR181 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER184 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 33) THR175 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 35) LYS177 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 ( 36) THR178 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 ( 38) LYS180 0 0 0 0 0 0 0 4 12 4 0 0 0 0 0 0 0 0 0 ( 39) THR181 0 0 0 0 0 0 0 0 0 0 0 1 5 6 0 0 0 0 0 ( 40) HIS182 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 42) SER184 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence elyemlteremeillliakgysnqeiasashitiKtvKThvSnilsklevqdrtqaviyafqhnli/elyemlteremeillliakgysnqeiasashiTiKTvKTHvSnilsklevqdrtqaviyafqhnli >7ve5_B:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=C-TERMINAL DOMAIN OF VRAR organism=Staphylococcus aureus DNA sequence DG(D1):DC(C19) DA(D2):DT(C18) DT(D3):DA(C17) DG(D4):DC(C16) DT(D5):DA(C15) DT(D6):DA(C14) DC(D7):DG(C13) DA(D8):DT(C12) DT(D9):DA(C11) DA(D10):DT(C10) DC(D11):DG(C9) DT(D12):DA(C8) DT(D13):DA(C7) DT(D14):DA(C6) DA(D15):DT(C5) DG(D16):DC(C4) DT(D17):DA(C3) DC(D18):DG(C2) DT(D19):DA(C1) chainB ( 33) THR175 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS177 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 ( 36) THR178 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS180 0 0 0 0 0 0 0 0 0 4 12 4 0 0 0 0 0 0 0 ( 39) THR181 0 0 0 0 0 6 5 1 0 0 0 0 0 0 0 0 0 0 0 ( 40) HIS182 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER184 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence elyemlteremeillliakgysnqeiasashiTiKTvKTHvSnilsklevqdrtqaviyafqhnli >7vjm_A:lambda_repressor-like_DNA-binding_domains; title=ACA1 IN COMPLEX WITH 19BP PALINDROMIC DNA SUBSTRATE organism=Pseudomonas phage JBD30 DNA sequence DA(C1):DT(D39) DT(C2):DA(D38) DA(C3):DT(D37) DG(C4):DC(D36) DG(C5):DC(D35) DC(C6):DG(D34) DA(C7):DT(D33) DC(C8):DG(D32) DA(C9):DT(D31) DA(C10):DT(D30) DT(C11):DA(D29) DG(C12):DC(D28) DT(C13):DA(D27) DG(C14):DC(D26) DC(C15):DG(D25) DC(C16):DG(D24) DT(C17):DA(D23) DA(C18):DT(D22) chainA ( 28) ARG33 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) SER42 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 39) ARG44 0 0 0 23 15 6 2 0 0 0 0 0 0 0 0 0 0 0 ( 40) VAL45 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 42) ARG47 0 6 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR48 0 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG59 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 prot.sequence vktpdasnhdpdprylrgllkkagisqRraaellglSdRVmRYylsedikegyRpapytvqfaleclandpps >7vjm_AB:lambda_repressor-like_DNA-binding_domains; title=ACA1 IN COMPLEX WITH 19BP PALINDROMIC DNA SUBSTRATE organism=Pseudomonas phage JBD30 DNA sequence DT(D22):DA(C18) DA(D23):DT(C17) DG(D24):DC(C16) DG(D25):DC(C15) DC(D26):DG(C14) DA(D27):DT(C13) DC(D28):DG(C12) DA(D29):DT(C11) DT(D30):DA(C10) DT(D31):DA(C9) DG(D32):DC(C8) DT(D33):DA(C7) DG(D34):DC(C6) DC(D35):DG(C5) DC(D36):DG(C4) DT(D37):DA(C3) DA(D38):DT(C2) DT(D39):DA(C1) chainB ( 36) SER42 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG44 0 0 22 13 7 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) VAL45 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG47 1 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR48 0 0 0 1 5 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG59 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 chainA ( 28) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 ( 37) SER42 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 39) ARG44 0 0 0 0 0 0 0 0 0 0 0 2 6 15 23 0 0 0 ( 40) VAL45 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 ( 42) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 11 6 0 ( 43) TYR48 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 ( 54) ARG59 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 prot.sequence vktpdasnhdpdprylrgllkkagisqRraaellglSdRVmRYylsedikegyRpapytvqfaleclandpps/ktpdasnhdpdprylrgllkkagisqrraaellglSdRVmRYylsedikegyRpapytvqfaleclandpps >7vjq_A:lambda_repressor-like_DNA-binding_domains; title=PECTOBACTERIUM PHAGE ZF40 APO-ACA2 COMPLEXED WITH 26BP DNA SUBSTRATE organism=Pectobacterium phage ZF40 DNA sequence DT(D2):DA(C27) DA(D3):DT(C26) DT(D4):DA(C25) DA(D5):DT(C24) DT(D6):DA(C23) DG(D7):DC(C22) DT(D8):DA(C21) DT(D9):DA(C20) DC(D10):DG(C19) DG(D11):DC(C18) DC(D12):DG(C17) DA(D13):DT(C16) DA(D14):DT(C15) DT(D15):DA(C14) DC(D16):DG(C13) DG(D17):DC(C12) DC(D18):DG(C11) DG(D19):DC(C10) DA(D20):DT(C9) DA(D21):DT(C8) DC(D22):DG(C7) DA(D23):DT(C6) DA(D24):DT(C5) DG(D25):DC(C4) DC(D26):DG(C3) DA(D27):DT(C2) chainA ( 32) SER28 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG30 0 0 0 0 0 0 0 10 14 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER31 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN33 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) TYR34 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG39 0 0 0 0 17 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence plgsmtnkelqairkllmldvseaaehigrvSaRSwQYwesgRsavpddveqemldlasvriemmsaidkrladgerpklrfynkldeyladnpdhnvigwrlsqsvaalyyteghadli >7vjq_AB:lambda_repressor-like_DNA-binding_domains; title=PECTOBACTERIUM PHAGE ZF40 APO-ACA2 COMPLEXED WITH 26BP DNA SUBSTRATE organism=Pectobacterium phage ZF40 DNA sequence DT(C2):DA(D27) DG(C3):DC(D26) DC(C4):DG(D25) DT(C5):DA(D24) DT(C6):DA(D23) DG(C7):DC(D22) DT(C8):DA(D21) DT(C9):DA(D20) DC(C10):DG(D19) DG(C11):DC(D18) DC(C12):DG(D17) DG(C13):DC(D16) DA(C14):DT(D15) DT(C15):DA(D14) DT(C16):DA(D13) DG(C17):DC(D12) DC(C18):DG(D11) DG(C19):DC(D10) DA(C20):DT(D9) DA(C21):DT(D8) DC(C22):DG(D7) DA(C23):DT(D6) DT(C24):DA(D5) DA(C25):DT(D4) DT(C26):DA(D3) DA(C27):DT(D2) chainA ( 32) SER28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 34) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 14 10 0 0 0 0 0 0 0 ( 35) SER31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 37) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 ( 38) TYR34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 ( 43) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 17 0 0 0 0 chainB ( 32) SER28 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG30 0 0 0 0 0 0 0 10 14 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER31 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN33 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) TYR34 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) ARG39 0 0 0 0 17 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence plgsmtnkelqairkllmldvseaaehigrvSaRSwQYwesgRsavpddveqemldlasvriemmsaidkrladgerpklrfynkldeyladnpdhnvigwrlsqsvaalyyteghadli/plgsmtnkelqairkllmldvseaaehigrvSaRSwQYwesgRsavpddveqemldlasvriemmsaidkrladgerpklrfynkldeyladnpdhnvigwrlsqsvaalyyteghadli >7vn2_C:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING ATCACGTGAT organism=? DNA sequence DT(G-3) DT(G-2) DA(G-1) DT(G0) DC(G1) DA(G2) DC(G3) DG(G4) DT(G5) DG(G6) DA(G7) DT(G8) DA(G9) DA(G10) DA(G11) chainC (378) GLU29 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ARG36 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 (386) GLU37 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 (389) ARG40 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 prot.sequence mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrErennrrRErrRravaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn3_AB:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING CACACGTGTG organism=? DNA sequence DT(E-3):DA(F10) DT(E-2):DA(F9) DC(E-1):DG(F8) DA(E0):DT(F7) DC(E1):DG(F6) DA(E2):DT(F5) DC(E3):DG(F4) DG(E4):DC(F3) DT(E5):DA(F2) DG(E6):DC(F1) DT(E7):DA(F0) DG(E8):DC(F-1) DA(E9):DT(F-2) DA(E10):DT(F-3) chainA (382) ASN33 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (383) ARG34 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (386) GLU37 0 0 0 0 0 0 0 1 4 8 0 0 0 0 (389) ARG40 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (390) ARG41 0 0 0 0 0 0 10 7 0 0 0 0 0 0 chainB (381) ASN33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (385) GLU37 0 0 0 1 8 3 0 0 0 0 0 0 0 0 (388) ARG40 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (389) ARG41 0 0 0 0 0 0 7 13 0 0 0 0 0 0 prot.sequence mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNRrrErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrrErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn3_C:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING CACACGTGTG organism=? DNA sequence DT(H-3):DA(G10) DT(H-2):DA(G9) DC(H-1):DG(G8) DA(H0):DT(G7) DC(H1):DG(G6) DA(H2):DT(G5) DC(H3):DG(G4) DG(H4):DC(G3) DT(H5):DA(G2) DG(H6):DC(G1) DT(H7):DA(G0) DG(H8):DC(G-1) DA(H9):DT(G-2) DA(H10):DT(G-3) chainC (372) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 1 3 (378) GLU29 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (382) ASN33 0 0 0 0 0 0 0 0 1 0 0 1 0 0 (385) ARG36 0 0 0 0 0 0 0 0 0 0 0 7 0 0 (386) GLU37 0 0 0 0 0 0 0 1 6 10 2 0 0 0 (389) ARG40 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (390) ARG41 0 0 0 0 0 0 10 8 0 0 0 0 0 0 prot.sequence mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn3_CD:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING CACACGTGTG organism=? DNA sequence DT(G-3):DA(H10) DT(G-2):DA(H9) DC(G-1):DG(H8) DA(G0):DT(H7) DC(G1):DG(H6) DA(G2):DT(H5) DC(G3):DG(H4) DG(G4):DC(H3) DT(G5):DA(H2) DG(G6):DC(H1) DT(G7):DA(H0) DG(G8):DC(H-1) DA(G9):DT(H-2) DA(G10):DT(H-3) chainC (372) ARG23 3 1 0 0 0 0 0 0 0 0 0 0 0 0 (378) GLU29 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (382) ASN33 0 0 1 0 0 1 0 0 0 0 0 0 0 0 (385) ARG36 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (386) GLU37 0 0 0 2 10 6 1 0 0 0 0 0 0 0 (389) ARG40 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (390) ARG41 0 0 0 0 0 0 8 10 0 0 0 0 0 0 chainD (371) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 1 3 (377) GLU29 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (381) ASN33 0 0 0 0 0 0 0 0 1 0 0 1 0 0 (384) ARG36 0 0 0 0 0 0 0 0 0 0 0 7 0 0 (385) GLU37 0 0 0 0 0 0 0 1 6 8 2 0 0 0 (388) ARG40 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (389) ARG41 0 0 0 0 0 0 11 8 0 0 0 0 0 0 prot.sequence mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn4_AB:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING TCCACGTGGA organism=? DNA sequence DT(F-3):DA(E10) DT(F-2):DA(E9) DT(F-1):DA(E8) DC(F0):DG(E7) DC(F1):DG(E6) DA(F2):DT(E5) DC(F3):DG(E4) DG(F4):DC(E3) DT(F5):DA(E2) DG(F6):DC(E1) DG(F7):DC(E0) DA(F8):DT(E-1) DA(F9):DT(E-2) DA(F10):DT(E-3) chainA (381) ASN33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (385) GLU37 0 0 0 0 10 10 3 0 0 0 0 0 0 0 (388) ARG40 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (389) ARG41 0 0 0 0 0 0 6 11 0 0 0 0 0 0 chainB (381) ASN33 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (385) GLU37 0 0 0 0 0 0 0 3 8 5 0 0 0 0 (388) ARG40 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (389) ARG41 0 0 0 0 0 0 14 7 0 0 0 0 0 0 prot.sequence kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrrErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrrErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn4_C:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING TCCACGTGGA organism=? DNA sequence DT(H-3):DA(G10) DT(H-2):DA(G9) DT(H-1):DA(G8) DC(H0):DG(G7) DC(H1):DG(G6) DA(H2):DT(G5) DC(H3):DG(G4) DG(H4):DC(G3) DT(H5):DA(G2) DG(H6):DC(G1) DG(H7):DC(G0) DA(H8):DT(G-1) DA(H9):DT(G-2) DA(H10):DT(G-3) chainC (372) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 1 1 (382) ASN33 0 0 0 0 0 0 0 0 1 0 0 1 0 0 (385) ARG36 0 0 0 0 0 0 0 0 0 0 1 7 0 0 (386) GLU37 0 0 0 0 0 0 0 1 6 10 3 0 0 0 (389) ARG40 0 0 0 0 0 0 0 0 0 1 3 0 0 0 (390) ARG41 0 0 0 0 0 0 9 8 0 0 0 0 0 0 prot.sequence mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrerenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn4_CD:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING TCCACGTGGA organism=? DNA sequence DT(G-3):DA(H10) DT(G-2):DA(H9) DT(G-1):DA(H8) DC(G0):DG(H7) DC(G1):DG(H6) DA(G2):DT(H5) DC(G3):DG(H4) DG(G4):DC(H3) DT(G5):DA(H2) DG(G6):DC(H1) DG(G7):DC(H0) DA(G8):DT(H-1) DA(G9):DT(H-2) DA(G10):DT(H-3) chainC (372) ARG23 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (382) ASN33 0 0 1 0 0 1 0 0 0 0 0 0 0 0 (385) ARG36 0 0 7 1 0 0 0 0 0 0 0 0 0 0 (386) GLU37 0 0 0 3 10 6 1 0 0 0 0 0 0 0 (389) ARG40 0 0 0 3 1 0 0 0 0 0 0 0 0 0 (390) ARG41 0 0 0 0 0 0 8 9 0 0 0 0 0 0 chainD (372) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 1 4 (382) ASN33 0 0 0 0 0 0 0 0 1 0 0 1 0 0 (385) ARG36 0 0 0 0 0 0 0 0 0 0 1 6 0 0 (386) GLU37 0 0 0 0 0 0 0 1 6 10 3 0 0 0 (389) ARG40 0 0 0 0 0 0 0 0 0 1 3 0 0 0 (390) ARG41 0 0 0 0 0 0 9 8 0 0 0 0 0 0 prot.sequence mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrerenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrerenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn5_AB:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING TTCACGTGAA organism=? DNA sequence DT(F-3):DA(E10) DT(F-2):DA(E9) DT(F-1):DA(E8) DT(F0):DA(E7) DC(F1):DG(E6) DA(F2):DT(E5) DC(F3):DG(E4) DG(F4):DC(E3) DT(F5):DA(E2) DG(F6):DC(E1) DA(F7):DT(E0) DA(F8):DT(E-1) DA(F9):DT(E-2) DA(F10):DT(E-3) chainA (381) ASN33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (384) ARG36 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (385) GLU37 0 0 0 0 6 8 5 0 0 0 0 0 0 0 (388) ARG40 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (389) ARG41 0 0 0 0 0 0 9 11 0 0 0 0 0 0 chainB (381) ASN33 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (384) ARG36 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (385) GLU37 0 0 0 0 0 0 0 6 10 7 0 0 0 0 (389) ARG41 0 0 0 0 0 1 12 11 0 0 0 0 0 0 prot.sequence kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrRErrrRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn5_B:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING TTCACGTGAA organism=? DNA sequence DT(E-3):DA(F10) DT(E-2):DA(F9) DT(E-1):DA(F8) DT(E0):DA(F7) DC(E1):DG(F6) DA(E2):DT(F5) DC(E3):DG(F4) DG(E4):DC(F3) DT(E5):DA(F2) DG(E6):DC(F1) DA(E7):DT(F0) DA(E8):DT(F-1) DA(E9):DT(F-2) DA(E10):DT(F-3) chainB (381) ASN33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (384) ARG36 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (385) GLU37 0 0 0 0 7 10 6 0 0 0 0 0 0 0 (389) ARG41 0 0 0 0 0 0 11 12 1 0 0 0 0 0 prot.sequence kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrRErrrRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn5_CD:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING TTCACGTGAA organism=? DNA sequence DT(G-3):DA(H10) DT(G-2):DA(H9) DT(G-1):DA(H8) DT(G0):DA(H7) DC(G1):DG(H6) DA(G2):DT(H5) DC(G3):DG(H4) DG(G4):DC(H3) DT(G5):DA(H2) DG(G6):DC(H1) DA(G7):DT(H0) DA(G8):DT(H-1) DA(G9):DT(H-2) DA(G10):DT(H-3) chainC (372) ARG23 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (378) GLU29 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (382) ASN33 0 0 2 0 0 1 0 0 0 0 0 0 0 0 (385) ARG36 0 0 5 4 0 0 0 0 0 0 0 0 0 0 (386) GLU37 0 0 0 2 10 5 1 0 0 0 0 0 0 0 (389) ARG40 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (390) ARG41 0 0 0 0 0 0 8 10 0 0 0 0 0 0 chainD (372) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 1 3 (378) GLU29 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (382) ASN33 0 0 0 0 0 0 0 0 1 0 0 1 0 0 (385) ARG36 0 0 0 0 0 0 0 0 0 0 4 3 0 0 (386) GLU37 0 0 0 0 0 0 0 3 5 10 2 0 0 0 (389) ARG40 0 0 0 0 0 0 0 0 0 3 3 0 0 0 (390) ARG41 0 0 0 0 0 0 10 8 0 0 0 0 0 0 prot.sequence mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn6_AB:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING CGCACGTGCG organism=? DNA sequence DT(F-3):DA(E10) DT(F-2):DA(E9) DC(F-1):DG(E8) DG(F0):DC(E7) DC(F1):DG(E6) DA(F2):DT(E5) DC(F3):DG(E4) DG(F4):DC(E3) DT(F5):DA(E2) DG(F6):DC(E1) DC(F7):DG(E0) DG(F8):DC(E-1) DA(F9):DT(E-2) DA(F10):DT(E-3) chainA (382) ASN33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (386) GLU37 0 0 0 0 10 8 1 0 0 0 0 0 0 0 (389) ARG40 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (390) ARG41 0 0 0 0 0 0 7 10 0 0 0 0 0 0 chainB (381) ASN33 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (385) GLU37 0 0 0 0 0 0 0 1 6 9 0 0 0 0 (389) ARG41 0 0 0 0 0 2 7 1 0 0 0 0 0 0 prot.sequence mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrrErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrrErrrRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn6_B:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING CGCACGTGCG organism=? DNA sequence DT(E-3):DA(F10) DT(E-2):DA(F9) DC(E-1):DG(F8) DG(E0):DC(F7) DC(E1):DG(F6) DA(E2):DT(F5) DC(E3):DG(F4) DG(E4):DC(F3) DT(E5):DA(F2) DG(E6):DC(F1) DC(E7):DG(F0) DG(E8):DC(F-1) DA(E9):DT(F-2) DA(E10):DT(F-3) chainB (381) ASN33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (385) GLU37 0 0 0 0 9 6 1 0 0 0 0 0 0 0 (389) ARG41 0 0 0 0 0 0 1 7 2 0 0 0 0 0 prot.sequence kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrrErrrRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn6_CD:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING CGCACGTGCG organism=? DNA sequence DT(H-3):DA(G10) DT(H-2):DA(G9) DC(H-1):DG(G8) DG(H0):DC(G7) DC(H1):DG(G6) DA(H2):DT(G5) DC(H3):DG(G4) DG(H4):DC(G3) DT(H5):DA(G2) DG(H6):DC(G1) DC(H7):DG(G0) DG(H8):DC(G-1) DA(H9):DT(G-2) DA(H10):DT(G-3) chainC (371) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (377) GLU29 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (381) ASN33 0 0 0 0 0 0 0 0 1 0 0 1 0 0 (384) ARG36 0 0 0 0 0 0 0 0 0 0 0 7 0 0 (385) GLU37 0 0 0 0 0 0 0 1 9 10 3 0 0 0 (388) ARG40 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (389) ARG41 0 0 0 0 0 0 10 8 0 0 0 0 0 0 chainD (371) ARG23 2 1 0 0 0 0 0 0 0 0 0 0 0 0 (377) GLU29 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (381) ASN33 0 0 2 0 0 1 0 0 0 0 0 0 0 0 (384) ARG36 0 0 7 1 0 0 0 0 0 0 0 0 0 0 (385) GLU37 0 0 0 5 7 6 1 0 0 0 0 0 0 0 (388) ARG40 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (389) ARG41 0 0 0 0 0 0 7 9 0 0 0 0 0 0 prot.sequence kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn7_AB:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING GACACGTGTC organism=? DNA sequence DT(F-3):DA(E10) DT(F-2):DA(E9) DG(F-1):DC(E8) DA(F0):DT(E7) DC(F1):DG(E6) DA(F2):DT(E5) DC(F3):DG(E4) DG(F4):DC(E3) DT(F5):DA(E2) DG(F6):DC(E1) DT(F7):DA(E0) DC(F8):DG(E-1) DA(F9):DT(E-2) DA(F10):DT(E-3) chainA (382) ASN33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (383) ARG34 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (386) GLU37 0 0 0 0 6 5 1 0 0 0 0 0 0 0 (389) ARG40 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (390) ARG41 0 0 0 0 0 0 8 12 0 0 0 0 0 0 chainB (382) ARG34 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (385) GLU37 0 0 0 0 0 0 0 0 4 8 0 0 0 0 (388) ARG40 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (389) ARG41 0 0 0 0 0 0 8 3 0 0 0 0 0 0 prot.sequence mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNRrrErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerennRrrErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn7_CD:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING GACACGTGTC organism=? DNA sequence DT(G-3):DA(H10) DT(G-2):DA(H9) DG(G-1):DC(H8) DA(G0):DT(H7) DC(G1):DG(H6) DA(G2):DT(H5) DC(G3):DG(H4) DG(G4):DC(H3) DT(G5):DA(H2) DG(G6):DC(H1) DT(G7):DA(H0) DC(G8):DG(H-1) DA(G9):DT(H-2) DA(G10):DT(H-3) chainC (382) ASN33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (385) ARG36 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (386) GLU37 0 0 0 0 10 6 1 0 0 0 0 0 0 0 (389) ARG40 0 0 0 2 4 0 0 0 0 0 0 0 0 0 (390) ARG41 0 0 0 0 0 0 8 13 0 0 0 0 0 0 chainD (377) GLU29 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (381) ASN33 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (384) ARG36 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (385) GLU37 0 0 0 0 0 0 0 1 5 10 1 0 0 0 (388) ARG40 0 0 0 0 0 0 0 0 0 3 2 0 0 0 (389) ARG41 0 0 0 0 0 0 9 8 0 0 0 0 0 0 prot.sequence mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn7_D:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING GACACGTGTC organism=? DNA sequence DT(H-3):DA(G10) DT(H-2):DA(G9) DG(H-1):DC(G8) DA(H0):DT(G7) DC(H1):DG(G6) DA(H2):DT(G5) DC(H3):DG(G4) DG(H4):DC(G3) DT(H5):DA(G2) DG(H6):DC(G1) DT(H7):DA(G0) DC(H8):DG(G-1) DA(H9):DT(G-2) DA(H10):DT(G-3) chainD (377) GLU29 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (381) ASN33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (384) ARG36 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (385) GLU37 0 0 0 1 10 5 1 0 0 0 0 0 0 0 (388) ARG40 0 0 0 2 3 0 0 0 0 0 0 0 0 0 (389) ARG41 0 0 0 0 0 0 8 9 0 0 0 0 0 0 prot.sequence kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn8_AB:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING GTCACGTGAC organism=? DNA sequence DT(F-3):DA(E10) DT(F-2):DA(E9) DG(F-1):DC(E8) DT(F0):DA(E7) DC(F1):DG(E6) DA(F2):DT(E5) DC(F3):DG(E4) DG(F4):DC(E3) DT(F5):DA(E2) DG(F6):DC(E1) DA(F7):DT(E0) DC(F8):DG(E-1) DA(F9):DT(E-2) DA(F10):DT(E-3) chainA (381) ASN33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (384) ARG36 0 0 1 3 0 0 0 0 0 0 0 0 0 0 (385) GLU37 0 0 0 0 11 7 1 0 0 0 0 0 0 0 (388) ARG40 0 0 0 2 2 0 0 0 0 0 0 0 0 0 (389) ARG41 0 0 0 0 0 0 7 12 0 0 0 0 0 0 chainB (381) ASN33 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (384) ARG36 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (385) GLU37 0 0 0 0 0 0 0 2 5 10 1 0 0 0 (388) ARG40 0 0 0 0 0 0 0 0 0 1 1 0 0 0 (389) ARG41 0 0 0 0 0 0 13 7 0 0 0 0 0 0 prot.sequence kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn8_B:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING GTCACGTGAC organism=? DNA sequence DT(E-3):DA(F10) DT(E-2):DA(F9) DG(E-1):DC(F8) DT(E0):DA(F7) DC(E1):DG(F6) DA(E2):DT(F5) DC(E3):DG(F4) DG(E4):DC(F3) DT(E5):DA(F2) DG(E6):DC(F1) DA(E7):DT(F0) DC(E8):DG(F-1) DA(E9):DT(F-2) DA(E10):DT(F-3) chainB (381) ASN33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (384) ARG36 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (385) GLU37 0 0 0 1 10 5 2 0 0 0 0 0 0 0 (388) ARG40 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (389) ARG41 0 0 0 0 0 0 7 13 0 0 0 0 0 0 prot.sequence kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarrkpswrerenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vn8_CD:Periplasmic_binding_protein-like_II; title=CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING GTCACGTGAC organism=? DNA sequence DT(G-3):DA(H10) DT(G-2):DA(H9) DG(G-1):DC(H8) DT(G0):DA(H7) DC(G1):DG(H6) DA(G2):DT(H5) DC(G3):DG(H4) DG(G4):DC(H3) DT(G5):DA(H2) DG(G6):DC(H1) DA(G7):DT(H0) DC(G8):DG(H-1) DA(G9):DT(H-2) DA(G10):DT(H-3) chainC (372) ARG23 4 1 0 0 0 0 0 0 0 0 0 0 0 0 (378) GLU29 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (382) ASN33 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (385) ARG36 0 0 4 4 0 0 0 0 0 0 0 0 0 0 (386) GLU37 0 0 0 2 10 5 1 0 0 0 0 0 0 0 (389) ARG40 0 0 0 3 3 0 0 0 0 0 0 0 0 0 (390) ARG41 0 0 0 0 0 0 8 10 0 0 0 0 0 0 chainD (372) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (378) GLU29 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (382) ASN33 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (385) ARG36 0 0 0 0 0 0 0 0 0 0 4 4 0 0 (386) GLU37 0 0 0 0 0 0 0 1 5 10 2 0 0 0 (389) ARG40 0 0 0 0 0 0 0 0 0 3 3 0 0 0 (390) ARG41 0 0 0 0 0 0 10 8 0 0 0 0 0 0 prot.sequence mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr/mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr >7vo0_GHKLMN:"Winged_helix"_DNA-binding_domain; title=STREPTOMYCES COELICOLOR ZINC UPTAKE REGULATOR COMPLEXED WITH ZINC AND DNA (TRIMER OF DIMERS) organism=? DNA sequence DG(B42):DC(A43) DT(B43):DA(A42) DA(B44):DT(A41) DT(B45):DA(A40) DC(B46):DG(A39) DG(B47):DC(A38) DG(B48):DC(A37) DG(B49):DC(A36) DC(B50):DG(A35) DA(B51):DT(A34) DA(B52):DT(A33) DC(B53):DG(A32) DG(B54):DC(A31) DC(B55):DG(A30) DG(B56):DC(A29) DG(B57):DC(A28) DC(B58):DG(A27) DA(B59):DT(A26) DC(B60):DG(A25) DT(B61):DA(A24) DG(B62):DC(A23) DA(B63):DT(A22) DA(B64):DT(A21) DC(B65):DG(A20) DA(B66):DT(A19) DC(B67):DG(A18) DC(B68):DG(A17) DG(B69):DC(A16) DT(B70):DA(A15) DT(B71):DA(A14) DG(B72):DC(A13) DT(B73):DA(A12) DC(B74):DG(A11) DA(B75):DT(A10) DT(B76):DA(A9) DG(B77):DC(A8) DT(B78):DA(A7) DG(B79):DC(A6) DC(B80):DG(A5) DC(B81):DG(A4) DT(B82):DA(A3) DT(B83):DA(A2) DG(B84):DC(A1) chainG ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 28) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 28) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 43) LEU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 2 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 chainM ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LEU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 ( 28) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LEU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 1 3 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 6 0 0 0 0 0 0 0 0 0 prot.sequence ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgratrqraavsaalqeveefrsaQelhdmlkhkgdavglTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvYrtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgratrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga >7vo0_N:"Winged_helix"_DNA-binding_domain; title=STREPTOMYCES COELICOLOR ZINC UPTAKE REGULATOR COMPLEXED WITH ZINC AND DNA (TRIMER OF DIMERS) organism=? DNA sequence DC(A1):DG(B84) DA(A2):DT(B83) DA(A3):DT(B82) DG(A4):DC(B81) DG(A5):DC(B80) DC(A6):DG(B79) DA(A7):DT(B78) DC(A8):DG(B77) DA(A9):DT(B76) DT(A10):DA(B75) DG(A11):DC(B74) DA(A12):DT(B73) DC(A13):DG(B72) DA(A14):DT(B71) DA(A15):DT(B70) DC(A16):DG(B69) DG(A17):DC(B68) DG(A18):DC(B67) DT(A19):DA(B66) DG(A20):DC(B65) DT(A21):DA(B64) DT(A22):DA(B63) DC(A23):DG(B62) DA(A24):DT(B61) DG(A25):DC(B60) DT(A26):DA(B59) DG(A27):DC(B58) DC(A28):DG(B57) DC(A29):DG(B56) DG(A30):DC(B55) DC(A31):DG(B54) DG(A32):DC(B53) DT(A33):DA(B52) DT(A34):DA(B51) DG(A35):DC(B50) DC(A36):DG(B49) DC(A37):DG(B48) DC(A38):DG(B47) DG(A39):DC(B46) DA(A40):DT(B45) DT(A41):DA(B44) DA(A42):DT(B43) DC(A43):DG(B42) chainN ( 6) ARG11 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LEU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 3 1 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 6 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga >7vo9_GHMN:"Winged_helix"_DNA-binding_domain; title=STREPTOMYCES COELICOLOR ZINC UPTAKE REGULATOR COMPLEXED WITH ZINC AND DNA (DIMER OF DIMERS) organism=? DNA sequence DG(B42):DC(A43) DT(B43):DA(A42) DA(B44):DT(A41) DT(B45):DA(A40) DC(B46):DG(A39) DG(B47):DC(A38) DG(B48):DC(A37) DG(B49):DC(A36) DC(B50):DG(A35) DA(B51):DT(A34) DA(B52):DT(A33) DC(B53):DG(A32) DG(B54):DC(A31) DC(B55):DG(A30) DG(B56):DC(A29) DG(B57):DC(A28) DC(B58):DG(A27) DA(B59):DT(A26) DC(B60):DG(A25) DT(B61):DA(A24) DG(B62):DC(A23) DA(B63):DT(A22) DA(B64):DT(A21) DC(B65):DG(A20) DA(B66):DT(A19) DC(B67):DG(A18) DC(B68):DG(A17) DG(B69):DC(A16) DT(B70):DA(A15) DT(B71):DA(A14) DG(B72):DC(A13) DT(B73):DA(A12) DC(B74):DG(A11) DA(B75):DT(A10) DT(B76):DA(A9) DG(B77):DC(A8) DT(B78):DA(A7) DG(B79):DC(A6) DC(B80):DG(A5) DC(B81):DG(A4) DT(B82):DA(A3) DT(B83):DA(A2) DG(B84):DC(A1) chainG ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 28) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LEU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LEU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 9 1 0 0 0 0 ( 28) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LEU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 4 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavglTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgratrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTtvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga >7vo9_N:"Winged_helix"_DNA-binding_domain; title=STREPTOMYCES COELICOLOR ZINC UPTAKE REGULATOR COMPLEXED WITH ZINC AND DNA (DIMER OF DIMERS) organism=? DNA sequence DG(B42):DC(A43) DT(B43):DA(A42) DA(B44):DT(A41) DT(B45):DA(A40) DC(B46):DG(A39) DG(B47):DC(A38) DG(B48):DC(A37) DG(B49):DC(A36) DC(B50):DG(A35) DA(B51):DT(A34) DA(B52):DT(A33) DC(B53):DG(A32) DG(B54):DC(A31) DC(B55):DG(A30) DG(B56):DC(A29) DG(B57):DC(A28) DC(B58):DG(A27) DA(B59):DT(A26) DC(B60):DG(A25) DT(B61):DA(A24) DG(B62):DC(A23) DA(B63):DT(A22) DA(B64):DT(A21) DC(B65):DG(A20) DA(B66):DT(A19) DC(B67):DG(A18) DC(B68):DG(A17) DG(B69):DC(A16) DT(B70):DA(A15) DT(B71):DA(A14) DG(B72):DC(A13) DT(B73):DA(A12) DC(B74):DG(A11) DA(B75):DT(A10) DT(B76):DA(A9) DG(B77):DC(A8) DT(B78):DA(A7) DG(B79):DC(A6) DC(B80):DG(A5) DC(B81):DG(A4) DT(B82):DA(A3) DT(B83):DA(A2) DG(B84):DC(A1) chainN ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 9 1 0 0 0 0 ( 28) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LEU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 4 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga >7vou_C:"Winged_helix"_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF HUMAN FORKHEAD BOX PROTEIN IN COMPLEX WITH DNA 1 organism=Homo sapiens DNA sequence DA(B2):DT(A15) DA(B3):DT(A14) DA(B4):DT(A13) DA(B5):DT(A12) DT(B6):DA(A11) DG(B7):DC(A10) DT(B8):DA(A9) DA(B9):DT(A8) DA(B10):DT(A7) DA(B11):DT(A6) DC(B12):DG(A5) DA(B13):DT(A4) DA(B14):DT(A3) DG(B15):DC(A2) chainC ( 47) ASN227 0 0 0 0 0 0 0 1 11 0 0 0 0 0 ( 48) SER228 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 50) ARG230 0 0 0 0 0 0 0 0 0 1 6 8 0 0 ( 51) HIS231 0 0 0 0 0 1 13 12 7 0 0 0 0 0 ( 52) ASN232 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 54) SER234 0 0 0 0 0 0 0 0 2 7 0 0 0 0 ( 55) LEU235 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 71) LYS251 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence kppysyvaliamairesaekrltlsgiyqyiiakfpfyeknkkgwqNSiRHNlSLnecfikvpregggerKgnywtldpacedmfe >7vov_AB:"Winged_helix"_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF HUMAN FORKHEAD BOX PROTEIN IN COMPLEX WITH DNA 2 organism=Homo sapiens DNA sequence DA(C1):DT(D17) DA(C2):DT(D16) DT(C3):DA(D15) DA(C4):DT(D14) DT(C5):DA(D13) DT(C6):DA(D12) DT(C7):DA(D11) DA(C8):DT(D10) DT(C9):DA(D9) DT(C10):DA(D8) DA(C11):DT(D7) DT(C12):DA(D6) DC(C13):DG(D5) DG(C14):DC(D4) DA(C15):DT(D3) chainA ( 48) ASN49 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 ( 51) ARG52 0 0 0 0 0 0 0 13 14 2 0 0 0 0 0 ( 52) HIS53 0 0 0 0 0 0 0 0 0 0 7 7 5 1 0 ( 55) SER56 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 chainB ( 45) LYS45 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ASN49 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 ( 52) ARG52 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 ( 53) HIS53 0 0 0 0 0 3 10 6 0 0 0 0 0 0 0 ( 56) SER56 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 73) LYS73 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qkppysyvaliamairesaekrltlsgiyqyiiakfpfyeknkkgwqNsiRHnlSlnecfikvpregggerkgnywtldpacedmfekgnyrr/aqkppysyvaliamairesaekrltlsgiyqyiiakfpfyeknkKgwqNsiRHnlSlnecfikvpregggerKgnywtldpacedmfek >7vov_B:"Winged_helix"_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF HUMAN FORKHEAD BOX PROTEIN IN COMPLEX WITH DNA 2 organism=Homo sapiens DNA sequence DT(D3):DA(C15) DC(D4):DG(C14) DG(D5):DC(C13) DA(D6):DT(C12) DT(D7):DA(C11) DA(D8):DT(C10) DA(D9):DT(C9) DT(D10):DA(C8) DA(D11):DT(C7) chainB ( 53) HIS53 0 0 0 0 0 0 0 6 10 prot.sequence aqkppysyvaliamairesaekrltlsgiyqyiiakfpfyeknkkgwqnsirHnlslnecfikvpregggerkgnywtldpacedmfek >7vox_CH:"Winged_helix"_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF HUMAN FORKHEAD BOX PROTEIN A IN COMPLEX WITH DNA 2 organism=Homo sapiens DNA sequence DT(F1):DA(G16) DC(F2):DG(G15) DG(F3):DC(G14) DA(F4):DT(G13) DT(F5):DA(G12) DA(F6):DT(G11) DA(F7):DT(G10) DT(F8):DA(G9) DA(F9):DT(G8) DA(F10):DT(G7) DA(F11):DT(G6) DT(F12):DA(G5) DA(F13):DT(G4) DT(F14):DA(G3) DT(F15):DA(G2) DT(F16):DA(G1) DT(D1):DA(E16) DC(D2):DG(E15) DG(D3):DC(E14) DA(D4):DT(E13) DT(D5):DA(E12) DA(D6):DT(E11) DA(D7):DT(E10) DT(D8):DA(E9) DA(D9):DT(E8) DA(D10):DT(E7) DA(D11):DT(E6) DT(D12):DA(E5) DA(D13):DT(E4) DT(D14):DA(E3) DT(D15):DA(E2) DT(D16):DA(E1) chainC ( 49) ASN216 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG219 0 0 0 0 0 0 0 0 0 0 0 8 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) HIS220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER223 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LYS240 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 46) ARG213 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ASN216 0 0 0 0 0 0 0 0 2 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER217 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG219 0 0 0 0 0 0 0 0 0 0 1 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) HIS220 0 0 0 0 0 0 1 8 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER223 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) PHE224 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LYS240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hakppysyislitmaiqqapskmltlseiyqwimdlfpyyrqnqqrwqNSiRHslSFndcfvkvarspdkpgKgsywtlhpdsgn/hakppysyislitmaiqqapskmltlseiyqwimdlfpyyrqnqqRwqNSiRHslSFndcfvkvarspdkpgKgsywtlhpdsgn >7vox_H:"Winged_helix"_DNA-binding_domain; title=THE CRYSTAL STRUCTURE OF HUMAN FORKHEAD BOX PROTEIN A IN COMPLEX WITH DNA 2 organism=Homo sapiens DNA sequence DA(E1):DT(D16) DA(E2):DT(D15) DA(E3):DT(D14) DT(E4):DA(D13) DA(E5):DT(D12) DT(E6):DA(D11) DT(E7):DA(D10) DT(E8):DA(D9) DA(E9):DT(D8) DT(E10):DA(D7) DT(E11):DA(D6) DA(E12):DT(D5) DT(E13):DA(D4) DC(E14):DG(D3) DG(E15):DC(D2) DA(E16):DT(D1) DA(G1):DT(F16) DA(G2):DT(F15) DA(G3):DT(F14) DT(G4):DA(F13) DA(G5):DT(F12) DT(G6):DA(F11) DT(G7):DA(F10) DT(G8):DA(F9) DA(G9):DT(F8) DT(G10):DA(F7) DT(G11):DA(F6) DA(G12):DT(F5) DT(G13):DA(F4) DC(G14):DG(F3) DG(G15):DC(F2) DA(G16):DT(F1) chainH ( 46) ARG213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 49) ASN216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 2 0 0 0 0 0 0 0 0 ( 50) SER217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 52) ARG219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 1 0 0 0 0 0 0 0 0 0 0 ( 53) HIS220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 8 1 0 0 0 0 0 0 ( 56) SER223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 ( 57) PHE224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 ( 73) LYS240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hakppysyislitmaiqqapskmltlseiyqwimdlfpyyrqnqqRwqNSiRHslSFndcfvkvarspdkpgKgsywtlhpdsgn >7vp1_A: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DT(C2):DA(D12) DG(C3):DC(D11) DT(C4):DA(D10) DG(C5):DC(D9) DG(C6):DC(D8) DT(C7):DA(D7) DC(C8):DG(D6) DC(C9):DG(D5) DC(C10):DG(D4) DC(C11):DG(D3) DC(C12):DG(D2) chainA ( 10) ASP31 0 0 0 0 4 5 0 0 0 0 0 ( 11) ARG32 18 17 1 0 0 0 0 0 0 0 0 ( 12) HIS33 0 0 20 11 7 0 0 0 0 0 0 ( 25) ARG46 0 0 0 0 0 14 12 4 0 0 0 ( 27) ARG48 0 0 0 0 0 0 0 1 15 7 0 prot.sequence ghiiratrkDRHskvftskgprdrRvRmsahtaiqfydvqdrlgydrpskavdwlikkaktaidk >7vp1_AB: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DT(C2):DA(D12) DG(C3):DC(D11) DT(C4):DA(D10) DG(C5):DC(D9) DG(C6):DC(D8) DT(C7):DA(D7) DC(C8):DG(D6) DC(C9):DG(D5) DC(C10):DG(D4) DC(C11):DG(D3) DC(C12):DG(D2) chainA ( 10) ASP31 0 0 0 0 4 5 0 0 0 0 0 ( 11) ARG32 18 17 1 0 0 0 0 0 0 0 0 ( 12) HIS33 0 0 20 11 7 0 0 0 0 0 0 ( 25) ARG46 0 0 0 0 0 14 12 4 0 0 0 ( 27) ARG48 0 0 0 0 0 0 0 1 15 7 0 chainB ( 1) ARG32 0 0 0 0 0 0 3 7 2 0 0 ( 2) HIS33 0 0 0 0 0 0 0 0 6 12 1 ( 15) ARG46 0 0 0 0 0 1 4 8 13 0 0 ( 17) ARG48 0 0 0 3 13 2 0 0 0 0 0 ( 37) ARG68 0 0 0 0 0 0 0 0 0 0 1 prot.sequence ghiiratrkDRHskvftskgprdrRvRmsahtaiqfydvqdrlgydrpskavdwlikkaktaidk/RHskvftskgprdrRvRmsahtaiqfydvqdrlgydRpskavdwlikkaktaid >7vp2_AB: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DT(C2):DA(D14) DG(C3):DC(D13) DT(C4):DA(D12) DG(C5):DC(D11) DG(C6):DC(D10) DT(C7):DA(D9) DC(C8):DG(D8) DC(C9):DG(D7) DC(C10):DG(D6) DC(C11):DG(D5) DA(C12):DT(D4) DC(C13):DG(D3) DT(C14):DA(D2) chainB ( 2) ASP31 0 0 0 0 4 4 0 0 0 0 0 0 0 ( 3) ARG32 19 19 2 0 0 0 0 0 0 0 0 0 0 ( 4) HIS33 0 0 20 12 8 0 0 0 0 0 0 0 0 ( 17) ARG46 0 0 0 0 0 13 13 4 0 0 0 0 0 ( 19) ARG48 0 0 0 0 0 0 0 1 13 4 0 0 0 chainA ( 27) ASP31 0 0 0 0 0 0 0 6 7 0 0 0 0 ( 28) ARG32 0 0 0 0 0 0 0 0 0 0 3 17 13 ( 29) HIS33 0 0 0 0 0 0 0 0 7 12 17 0 0 ( 42) ARG46 0 0 0 0 0 0 2 13 16 0 0 0 0 ( 44) ARG48 0 0 0 4 15 4 0 0 0 0 0 0 0 prot.sequence lkgysvgggeivevqgghiiratgrkDRHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl/kDRHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl >7vp2_B: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(D2):DT(C14) DG(D3):DC(C13) DT(D4):DA(C12) DG(D5):DC(C11) DG(D6):DC(C10) DG(D7):DC(C9) DG(D8):DC(C8) DA(D9):DT(C7) DC(D10):DG(C6) DC(D11):DG(C5) DA(D12):DT(C4) DC(D13):DG(C3) DA(D14):DT(C2) chainB ( 2) ASP31 0 0 0 0 0 0 0 4 4 0 0 0 0 ( 3) ARG32 0 0 0 0 0 0 0 0 0 0 2 19 19 ( 4) HIS33 0 0 0 0 0 0 0 0 8 12 20 0 0 ( 17) ARG46 0 0 0 0 0 4 13 13 0 0 0 0 0 ( 19) ARG48 0 0 0 4 13 1 0 0 0 0 0 0 0 prot.sequence kDRHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl >7vp3_CDGJ: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DG(E3):DC(B11) DT(E4):DA(B10) DG(E5):DC(B9) DG(E6):DC(B8) DG(E7):DC(B7) DT(E8):DA(B6) DC(E9):DG(B5) DC(E10):DG(B4) DC(E11):DG(B3) DC(E12):DG(B2) DG(A2):DC(F12) DG(A3):DC(F11) DG(A4):DC(F10) DG(A5):DC(F9) DA(A6):DT(F8) DC(A7):DG(F7) DC(A8):DG(F6) DC(A9):DG(F5) DA(A10):DT(F4) DC(A11):DG(F3) chainD ( 4) ASP54 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG55 17 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) HIS56 0 21 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG65 0 0 0 11 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG67 0 0 0 0 0 0 1 15 5 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 3) ASP54 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) HIS56 0 0 0 0 0 0 0 4 11 1 0 0 0 0 0 0 0 0 0 0 ( 14) ARG65 0 0 0 0 0 2 9 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG67 0 0 4 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 3) ASP54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 ( 4) ARG55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 15 ( 5) HIS56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 19 0 ( 14) ARG65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 13 0 0 0 ( 16) ARG67 0 0 0 0 0 0 0 0 0 0 0 4 16 2 0 0 0 0 0 0 chainG ( 4) ASP54 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 ( 6) HIS56 0 0 0 0 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 ( 15) ARG65 0 0 0 0 0 0 0 0 0 0 0 0 8 14 4 0 0 0 0 0 ( 17) ARG67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 4 0 0 prot.sequence tkDRHtkvegrgrRiRmpamcaarvfqltrelghksdgetiewllqqaepaviaatgtgtip/stkDRHtkvegrgrRiRmpamcaarvfqltrelghksdgetiewllqqaepaviaatg/stkDrHtkvegrgrRiRmpamcaarvfqltrelghksdgetiewllqqaepaviaa/tkDrHtkvegrgrRiRmpamcaarvfqltrelghksdgetiewllqqaepaviaatgt >7vp3_D: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DG(E3):DC(B11) DT(E4):DA(B10) DG(E5):DC(B9) DG(E6):DC(B8) DG(E7):DC(B7) DT(E8):DA(B6) DC(E9):DG(B5) DC(E10):DG(B4) DC(E11):DG(B3) DC(E12):DG(B2) DG(A2):DC(F12) DG(A3):DC(F11) DG(A4):DC(F10) DG(A5):DC(F9) DA(A6):DT(F8) DC(A7):DG(F7) DC(A8):DG(F6) DC(A9):DG(F5) DA(A10):DT(F4) DC(A11):DG(F3) chainD ( 4) ASP54 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG55 17 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) HIS56 0 21 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG65 0 0 0 11 14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG67 0 0 0 0 0 0 1 15 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stkDRHtkvegrgrRiRmpamcaarvfqltrelghksdgetiewllqqaepaviaatg >7vp3_ILNP: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DG(O2):DC(M12) DG(O3):DC(M11) DG(O4):DC(M10) DG(O5):DC(M9) DA(O6):DT(M8) DC(O7):DG(M7) DC(O8):DG(M6) DC(O9):DG(M5) DA(O10):DT(M4) DC(O11):DG(M3) DA(K1):DT(M2) DT(K2):DA(M1) DG(K3):DC(H11) DT(K4):DA(H10) DG(K5):DC(H9) DG(K6):DC(H8) DG(K7):DC(H7) DT(K8):DA(H6) DC(K9):DG(H5) DC(K10):DG(H4) DC(K11):DG(H3) DC(K12):DG(H2) chainI ( 4) ASP54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 ( 5) ARG55 0 0 0 0 0 0 0 0 0 0 0 15 16 2 0 0 0 0 0 0 0 0 ( 6) HIS56 0 0 0 0 0 0 0 0 0 0 0 0 0 15 11 5 0 0 0 0 0 0 ( 15) ARG65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 13 2 0 0 0 0 ( 17) ARG67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 3 0 chainL ( 4) ASP54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 ( 6) HIS56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 ( 15) ARG65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 8 0 0 ( 17) ARG67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 2 0 0 0 0 0 chainN ( 3) ASP54 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG55 0 0 0 0 0 0 0 0 3 12 14 0 0 0 0 0 0 0 0 0 0 0 ( 5) HIS56 0 0 0 0 0 0 4 10 18 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ARG65 0 0 0 0 2 13 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ARG67 0 8 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 4) ASP54 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) HIS56 2 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG65 0 0 8 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG67 0 0 0 0 0 2 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence stkDRHtkvegrgrRiRmpamcaarvfqltrelghksdgetiewllqqaepaviaatgt/stkDrHtkvegrgrRiRmpamcaarvfqltrelghksdgetiewllqqaepaviaatgt/tkDRHtkvegrgrRiRmpamcaarvfqltrelghksdgetiewllqqaepaviaatgtgtip/stkDrHtkvegrgrRiRmpamcaarvfqltrelghksdgetiewllqqaepaviaatgtgt >7vp4_AB: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DT(C2):DA(D14) DG(C3):DC(D13) DT(C4):DA(D12) DG(C5):DC(D11) DG(C6):DC(D10) DT(C7):DA(D9) DC(C8):DG(D8) DC(C9):DG(D7) DC(C10):DG(D6) DC(C11):DG(D5) DA(C12):DT(D4) DG(C13):DC(D3) DT(C14):DA(D2) chainB ( 11) ASP31 0 0 0 0 5 4 0 0 0 0 0 0 0 ( 12) ARG32 20 20 3 0 0 0 0 0 0 0 0 0 0 ( 13) HIS33 0 0 15 12 9 0 0 0 0 0 0 0 0 ( 26) ARG46 0 0 0 0 0 14 14 4 0 0 0 0 0 ( 28) ARG48 0 0 0 0 0 0 0 0 17 9 0 0 0 chainA ( 17) ASP31 0 0 0 0 0 0 0 1 13 1 0 0 0 ( 18) ARG32 0 0 0 0 0 0 0 0 0 0 1 2 0 ( 19) HIS33 0 0 0 0 0 0 0 0 6 13 22 0 0 ( 32) ARG46 0 0 0 0 0 0 2 11 16 0 0 0 0 ( 34) ARG48 0 0 0 4 18 4 0 0 0 0 0 0 0 prot.sequence eivevgghiiratgrkDRHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl/ghiiratgrkDRHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktai >7vp4_EF: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DT(G2):DA(H14) DG(G3):DC(H13) DT(G4):DA(H12) DG(G5):DC(H11) DG(G6):DC(H10) DT(G7):DA(H9) DC(G8):DG(H8) DC(G9):DG(H7) DC(G10):DG(H6) DC(G11):DG(H5) DA(G12):DT(H4) DG(G13):DC(H3) DT(G14):DA(H2) chainF ( 2) ASP31 0 0 0 0 10 4 0 0 0 0 0 0 0 ( 3) ARG32 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 4) HIS33 0 0 17 11 7 0 0 0 0 0 0 0 0 ( 17) ARG46 0 0 0 0 0 13 15 5 0 0 0 0 0 ( 19) ARG48 0 0 0 0 0 0 0 0 14 3 0 0 0 chainE ( 18) ASP31 0 0 0 0 0 0 0 7 11 0 0 0 0 ( 19) ARG32 0 0 0 0 0 0 0 0 0 0 1 4 0 ( 20) HIS33 0 0 0 0 0 0 0 0 7 13 24 0 0 ( 33) ARG46 0 0 0 0 0 0 4 13 15 0 0 0 0 ( 35) ARG48 0 0 0 4 16 5 0 0 0 0 0 0 0 prot.sequence geivevqghiiratgrkDRHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl/kDRHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkakta >7vp4_F: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(H2):DT(G14) DC(H3):DG(G13) DT(H4):DA(G12) DG(H5):DC(G11) DG(H6):DC(G10) DG(H7):DC(G9) DG(H8):DC(G8) DA(H9):DT(G7) DC(H10):DG(G6) DC(H11):DG(G5) DA(H12):DT(G4) DC(H13):DG(G3) DA(H14):DT(G2) chainF ( 2) ASP31 0 0 0 0 0 0 0 4 10 0 0 0 0 ( 3) ARG32 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 4) HIS33 0 0 0 0 0 0 0 0 7 11 17 0 0 ( 17) ARG46 0 0 0 0 0 5 15 13 0 0 0 0 0 ( 19) ARG48 0 0 0 3 14 0 0 0 0 0 0 0 0 prot.sequence kDRHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkakta >7vp4_IJ: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DT(K2):DA(L14) DG(K3):DC(L13) DT(K4):DA(L12) DG(K5):DC(L11) DG(K6):DC(L10) DT(K7):DA(L9) DC(K8):DG(L8) DC(K9):DG(L7) DC(K10):DG(L6) DC(K11):DG(L5) DA(K12):DT(L4) DG(K13):DC(L3) DT(K14):DA(L2) chainJ ( 14) ASP31 0 0 0 0 5 1 0 0 0 0 0 0 0 ( 15) ARG32 24 20 4 0 0 0 0 0 0 0 0 0 0 ( 16) HIS33 0 0 23 12 7 0 0 0 0 0 0 0 0 ( 29) ARG46 0 0 0 0 0 14 11 5 0 0 0 0 0 ( 31) ARG48 0 0 0 0 0 0 0 1 13 6 0 0 0 chainI ( 1) ARG32 0 0 0 0 0 0 0 0 0 0 1 2 0 ( 2) HIS33 0 0 0 0 0 0 0 0 12 12 22 0 0 ( 15) ARG46 0 0 0 0 0 0 2 9 15 0 0 0 0 ( 17) ARG48 0 0 0 2 17 3 0 0 0 0 0 0 0 prot.sequence RHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl/evqggiiratgrkDRHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl >7vp5_AB: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(D2):DT(C14) DC(D3):DG(C13) DA(D4):DT(C12) DC(D5):DG(C11) DG(D6):DC(C10) DG(D7):DC(C9) DG(D8):DC(C8) DA(D9):DT(C7) DC(D10):DG(C6) DC(D11):DG(C5) DA(D12):DT(C4) DC(D13):DG(C3) DA(D14):DT(C2) chainA ( 15) ARG46 0 0 0 0 20 13 4 0 0 0 0 0 0 ( 17) ARG48 0 0 0 0 0 0 0 1 17 3 0 0 0 chainB ( 18) ASP31 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 19) ARG32 0 0 0 0 0 0 0 0 0 0 3 16 14 ( 20) HIS33 0 0 0 0 0 0 0 0 8 11 15 0 0 ( 33) ARG46 0 0 0 0 0 6 14 11 0 0 0 0 0 ( 35) ARG48 0 0 0 4 1 0 0 0 0 0 0 0 0 prot.sequence rhskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl/eivevqgghiiratgrkDRHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidk >7vp5_B: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(D2):DT(C14) DC(D3):DG(C13) DA(D4):DT(C12) DC(D5):DG(C11) DG(D6):DC(C10) DG(D7):DC(C9) DG(D8):DC(C8) DA(D9):DT(C7) DC(D10):DG(C6) DC(D11):DG(C5) DA(D12):DT(C4) DC(D13):DG(C3) DA(D14):DT(C2) chainB ( 18) ASP31 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 19) ARG32 0 0 0 0 0 0 0 0 0 0 3 16 14 ( 20) HIS33 0 0 0 0 0 0 0 0 8 11 15 0 0 ( 33) ARG46 0 0 0 0 0 6 14 11 0 0 0 0 0 ( 35) ARG48 0 0 0 4 1 0 0 0 0 0 0 0 0 prot.sequence eivevqgghiiratgrkDRHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidk >7vp5_EF: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(H2):DT(G14) DC(H3):DG(G13) DA(H4):DT(G12) DC(H5):DG(G11) DG(H6):DC(G10) DG(H7):DC(G9) DG(H8):DC(G8) DA(H9):DT(G7) DC(H10):DG(G6) DC(H11):DG(G5) DA(H12):DT(G4) DC(H13):DG(G3) DA(H14):DT(G2) chainE ( 15) ARG46 0 0 0 0 15 9 2 0 0 0 0 0 0 ( 17) ARG48 0 0 0 0 0 0 0 2 16 3 0 0 0 chainF ( 18) ASP31 0 0 0 0 0 0 0 6 8 0 0 0 0 ( 19) ARG32 0 0 0 0 0 0 0 0 0 0 5 23 25 ( 20) HIS33 0 0 0 0 0 0 0 0 6 11 17 0 0 ( 33) ARG46 0 0 0 0 0 7 14 11 0 0 0 0 0 ( 35) ARG48 0 0 0 12 14 2 0 0 0 0 0 0 0 prot.sequence rhskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl/eivevqgghiiratgrkDRHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl >7vp5_IJ: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DT(K2):DA(L14) DG(K3):DC(L13) DT(K4):DA(L12) DG(K5):DC(L11) DG(K6):DC(L10) DT(K7):DA(L9) DC(K8):DG(L8) DC(K9):DG(L7) DC(K10):DG(L6) DG(K11):DC(L5) DT(K12):DA(L4) DG(K13):DC(L3) DT(K14):DA(L2) chainI ( 14) ARG46 0 0 0 0 0 0 2 12 17 0 0 0 0 ( 16) ARG48 0 0 0 2 13 4 0 0 0 0 0 0 0 chainJ ( 2) ASP31 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 3) ARG32 14 14 2 0 0 0 0 0 0 0 0 0 0 ( 4) HIS33 0 0 17 12 8 0 0 0 0 0 0 0 0 ( 17) ARG46 0 0 0 0 0 5 12 7 0 0 0 0 0 ( 19) ARG48 0 0 0 0 0 0 0 0 3 3 0 0 0 prot.sequence hskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl/kDRHskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaid >7vp7_A: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DT(D1):DA(C15) DG(D2):DC(C14) DG(D3):DC(C13) DG(D4):DC(C12) DG(D5):DC(C11) DG(D6):DC(C10) DG(D7):DC(C9) DG(D8):DC(C8) DC(D9):DG(C7) DC(D10):DG(C6) DT(D11):DA(C5) chainA ( 2) ARG32 0 0 0 6 14 3 0 0 0 0 0 ( 16) ARG46 0 0 0 0 0 12 12 2 0 0 0 ( 18) ARG48 0 0 0 0 0 0 0 0 2 13 17 prot.sequence dRhskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl >7vp7_AB: title=STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(C5):DT(D11) DG(C6):DC(D10) DG(C7):DC(D9) DC(C8):DG(D8) DC(C9):DG(D7) DC(C10):DG(D6) DC(C11):DG(D5) DC(C12):DG(D4) DC(C13):DG(D3) DC(C14):DG(D2) DA(C15):DT(D1) chainA ( 2) ARG32 0 0 0 0 0 3 14 6 0 0 0 ( 16) ARG46 0 0 0 2 12 12 0 0 0 0 0 ( 18) ARG48 17 13 2 0 0 0 0 0 0 0 0 chainB ( 2) ASP44 0 0 3 0 0 0 0 0 0 0 0 ( 4) ARG46 0 0 5 14 5 0 0 0 0 0 0 ( 6) ARG48 0 0 0 0 2 14 7 0 0 0 0 prot.sequence dRhskvftskgprdrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl/rDrRvRlsahtaiqfydvqdrlgydrpskavdwlikkaktaidkl >7vpd_CDFMN: title=CRYO-EM STRUCTURE OF STREPTOMYCES COELICOLOR RNAP-PROMOTER OPEN COMPLEX WITH ONE ZUR DIMERS organism=? DNA sequence DC(O1):DG(P84) DA(O2):DT(P83) DA(O3):DT(P82) DG(O4):DC(P81) DG(O5):DC(P80) DC(O6):DG(P79) DA(O7):DT(P78) DC(O8):DG(P77) DA(O9):DT(P76) DT(O10):DA(P75) DG(O11):DC(P74) DA(O12):DT(P73) DC(O13):DG(P72) DA(O15):DT(P70) DC(O16):DG(P69) DG(O17):DC(P68) DG(O18):DC(P67) DT(O19):DA(P66) DG(O20):DC(P65) DT(O21):DA(P64) DT(O22):DA(P63) DA(O24):DT(P61) DG(O25):DC(P60) DT(O26):DA(P59) DG(O27):DC(P58) DC(O28):DG(P57) DC(O29):DG(P56) DG(O30):DC(P55) DC(O31):DG(P54) DG(O32):DC(P53) DT(O33):DA(P52) DT(O34):DA(P51) DG(O35):DC(P50) DC(O36):DG(P49) DC(O37):DG(P48) DC(O38):DG(P47) DG(O39):DC(P46) DA(O40):DT(P45) DT(O41):DA(P44) DA(O42):DT(P43) DC(O43):DG(P42) DC(O44):DG(P41) DC(O45):DG(P40) DC(O46):DG(P39) DC(O47):DG(P38) DT(O48):DA(P37) DA(O49):DT(P36) DC(O50):DG(P35) DC(O51):DG(P34) DC(O52):DG(P33) DG(O53):DC(P32) DT(O54):DA(P31) DA(O55):DT(P30) DG(O56):DC(P29) DT(O57):DA(P28) DT(O58):DA(P27) DG(O59):DC(P26) DA(O60):DT(P25) DC(O61):DG(P24) DT(O62):DA(P23) DG(O63):DG(P22) DG(O64):DG(P21) DC(O65):DC(P20) DA(O66):DA(P19) DT(O67):DT(P18) DC(O68):DC(P17) DC(O69):DG(P16) DG(O70):DC(P15) DG(O71):DC(P14) DG(O72):DC(P13) DC(O73):DG(P12) DG(O74):DC(P11) DC(O75):DG(P10) DC(O76):DG(P9) DG(O77):DC(P8) DG(O78):DC(P7) DG(O79):DC(P6) DT(O80):DA(P5) DC(O81):DG(P4) DG(O82):DC(P3) DC(O83):DG(P2) DC(O84):DG(P1) chainC (146) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ILE193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) PRO194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 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0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 6) ARG11 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence astaplrisfakikeplevpnllalqtesfdwllgndawkarvesalesgqdvptksgleeifeeispiedfsgsmsltfrdhrfeppknsideckdrdftyaaplfvtaeftnnetgeiksqtvfmgdfplmtnkgtfvingteRvvvsqlvRspgvyfdssidktsdkdifsakiIPsrgaWlEmeidkrdmvgvridrkrkqsvtvllkalgwtteqileefgeyesmratlekdhtqgqddalldiyrklrpgepptreaaqtllenlyfnpkRydlakvgrykvnkklgadepldagvlttddviatikylvklhagetetvgesgreivvetddIdhfgnRrirnvgeliqnqvrtglaRmervvrErmttqdveaitpqtliniRPvvasikEffgTsqlsqFmdqnnplsglthkrrlnalgpggLsrERagfEVrdvhpshygrmcpietpegpnigligslasygrinpfgfietpyrkvvegqvtddvdyltadeedrfviaqanaalgddmrfaearvlvrrrggevdyvpgddvdymdvsprqmvsvatamipflehddanralmganmmrqavpliksesplvgtgmeyrsaadagdvvkaekagvvqevsadyitttnddgtyityrlakfsrsnqgtsvnqkvivaegdriiegqvladgpatengemalgknllvafmpweghnyedaiilsqrlvqddvlssihieehevdardtklgpeeitrdipnvseevladldergiirigaevvagdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgeigkvigvrvfdreegdelppgvnqlvrvyvaqkrkitdgdklagrhgnkgviskinpiedmpfledgtpvdiilnplavpsrmnpgqvleihlgwlasrgwdvsglaeewaqrlqvigadkvepgtnvatpvfdgaredelagllqhtipnrdgermvlpsgkarlfdgrsgepfpepisvgymyilklhhlvddklharstgpysmitqqplggkaqfggqrfgemevwaleaygaayalqelltiksddvtgrvkvyeaivkgenipepgipesfkvlikemqslclnvevlssdgmsie/fdelriglataddirqwshgevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekviyfaaymitfvdeerrtrdlpsleahvsverqqieqrrdsdlearakkletdlaeleaegakadvrrkvregaeremkqlrdraqreidrldevwnrfknlkvqdlegdellyrelrdrfgtyfdgsmgaaalqkrlesfdldeeaerlreiirtgkgqkktralkrlkvvsaflqtsnspkgmvldcvpvippdlrpmvqldggrfatsdlndlyrrvinrnnrlkrlldlgapeiivnnekrmlqeavdalfdngrrgRpvtgpgnrplkslsdmlkgkqgrfrqnllgkrvdysaRsvivvgpqlklhqcglpkamalelfkpfvmkrlvdlnhaqniksakrmvergrtvvydvleeviaehpvllnrAPtlhrlgiqafepqlvegkaiqihplvctafnadfdgdQmavhlplsaeaqaearilmlssnnilkpadgrpvtmptqdmvlglfflttdsegrspkgegrafgssaeaimafdagdltlqakidirfpvgtipprgfeppareegepewqqgdtftlkttlgralfnellpedypfvdyevgkkqlseivndlaerypkvivaatldnlkaagffwatrsgvtvaisdivvpdakkeivkgyegqdekvqkqyerglitkeertqeliaiwtkatnevaeamndnfpktnpvsmmvnsgargnmmqmrqiagmrglvsnaknetiprpikasfreglsvleyfisthgarkgladtalrTadsgyltrrlvdvsqdviireedcgterglklpiatrdadgtlrkaedvetsvyarmlaedvvidgkviapanvdlgdvlidalvahgveevktrsiltcesqvgtcamcygrslatgklvdigeavgiiaaqsigepgtqltmrtfhtggvagdditqglprvvelfeartpkgvapiseasgrvrieetektkkivvtpddgsdetafpiskrarllvgegdhvevgqkltvgatnphdvlrilgqravqvhlvgevqkvynsqgvsihdkhieiiirqmlrrvtiiesgdaellpgelvertkfetenrrvvqegghpasgrpqlmgitkaslateswlsaasfqettrvltdaainaksdsliglkenviigklipagtglsryrnirvepteeakaam/atadpVKdyLkqIgKvpLlnaeqevelakrieaglfaedklansdklapklkreleiiaedgrraknhlleanlRLvvslakRYTgRgmlFldliqegnlgliravekfdytKgYkfSTYaTWWirQaiTRamadqartiripVHmvEvinklarvqrqmlqdlgreptpeelakeldmtpekvievqkygrepislhtplgEDgdsefgdliedseavvpadavsftllqeqlhsvldtlsereagvvsmrfgltdgqpktldeigkvygvtRERiRqiesktmsklrhpsrsqvlrdyl/ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvyRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvyRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga >7vpd_M:"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF STREPTOMYCES COELICOLOR RNAP-PROMOTER OPEN COMPLEX WITH ONE ZUR DIMERS organism=? DNA sequence DC(O1):DG(P84) DA(O2):DT(P83) DA(O3):DT(P82) DG(O4):DC(P81) DG(O5):DC(P80) DC(O6):DG(P79) DA(O7):DT(P78) DC(O8):DG(P77) DA(O9):DT(P76) DT(O10):DA(P75) DG(O11):DC(P74) DA(O12):DT(P73) DC(O13):DG(P72) DA(O15):DT(P70) DC(O16):DG(P69) DG(O17):DC(P68) DG(O18):DC(P67) DT(O19):DA(P66) DG(O20):DC(P65) DT(O21):DA(P64) DT(O22):DA(P63) DA(O24):DT(P61) DG(O25):DC(P60) DT(O26):DA(P59) DG(O27):DC(P58) DC(O28):DG(P57) DC(O29):DG(P56) DG(O30):DC(P55) DC(O31):DG(P54) DG(O32):DC(P53) DT(O33):DA(P52) DT(O34):DA(P51) DG(O35):DC(P50) DC(O36):DG(P49) DC(O37):DG(P48) DC(O38):DG(P47) DG(O39):DC(P46) DA(O40):DT(P45) DT(O41):DA(P44) DA(O42):DT(P43) DC(O43):DG(P42) DC(O44):DG(P41) DC(O45):DG(P40) DC(O46):DG(P39) DC(O47):DG(P38) DT(O48):DA(P37) DA(O49):DT(P36) DC(O50):DG(P35) DC(O51):DG(P34) DC(O52):DG(P33) DG(O53):DC(P32) DT(O54):DA(P31) DA(O55):DT(P30) DG(O56):DC(P29) DT(O57):DA(P28) DT(O58):DA(P27) DG(O59):DC(P26) DA(O60):DT(P25) DC(O61):DG(P24) DT(O62):DA(P23) DG(O63):DG(P22) DG(O64):DG(P21) DC(O65):DC(P20) DA(O66):DA(P19) DT(O67):DT(P18) DC(O68):DC(P17) DC(O69):DG(P16) DG(O70):DC(P15) DG(O71):DC(P14) DG(O72):DC(P13) DC(O73):DG(P12) DG(O74):DC(P11) DC(O75):DG(P10) DC(O76):DG(P9) DG(O77):DC(P8) DG(O78):DC(P7) DG(O79):DC(P6) DT(O80):DA(P5) DC(O81):DG(P4) DG(O82):DC(P3) DC(O83):DG(P2) DC(O84):DG(P1) chainM ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvyRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga >7vpz_CDFMN:"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF STREPTOMYCES COELICOLOR TRANSCRIPTION INITIAL COMPLEX WITH ONE ZUR DIMER organism=? DNA sequence DC(O1):DG(P84) DA(O2):DT(P83) DA(O3):DT(P82) DG(O4):DC(P81) DG(O5):DC(P80) DC(O6):DG(P79) DA(O7):DT(P78) DC(O8):DG(P77) DA(O9):DT(P76) DT(O10):DA(P75) DG(O11):DC(P74) DA(O12):DT(P73) DC(O13):DG(P72) DA(O15):DT(P70) DC(O16):DG(P69) DG(O17):DC(P68) DG(O18):DC(P67) DT(O19):DA(P66) DG(O20):DC(P65) DT(O21):DA(P64) DT(O22):DA(P63) DC(O23):DG(P62) DA(O24):DT(P61) DG(O25):DC(P60) DT(O26):DA(P59) DG(O27):DC(P58) DC(O28):DG(P57) DC(O29):DG(P56) DG(O30):DC(P55) DC(O31):DG(P54) DG(O32):DC(P53) DT(O33):DA(P52) DT(O34):DA(P51) DG(O35):DC(P50) DC(O36):DG(P49) DC(O37):DG(P48) DC(O38):DG(P47) DG(O39):DC(P46) DA(O40):DT(P45) DT(O41):DA(P44) DA(O42):DT(P43) DC(O43):DG(P42) DC(O44):DG(P41) DC(O45):DG(P40) DC(O46):DG(P39) DC(O47):DG(P38) DT(O48):DA(P37) DA(O49):DT(P36) DC(O50):DG(P35) DC(O51):DG(P34) DC(O52):DG(P33) DG(O53):DC(P32) DT(O54):DA(P31) DA(O55):DT(P30) DG(O56):DC(P29) DT(O57):DA(P28) DT(O58):DT(P27) DG(O59):DG(P26) DA(O60):DA(P25) DC(O61):DC(P24) DT(O62):DT(P23) DG(O63):DG(P22) DG(O64):DG(P21) DC(O65):DC(P20) DA(O66):DA(P19) DT(O67):DT(P18) DC(O68):DC(P17) DC(O69):DC(P16) DG(O70):DG(P15) DG(O71):DC(P14) DG(O72):DC(P13) DC(O73):DG(P12) DG(O74):DC(P11) DC(O75):DG(P10) DC(O76):DG(P9) DG(O77):DC(P8) DG(O78):DC(P7) DG(O79):DC(P6) DT(O80):DA(P5) DC(O81):DG(P4) DG(O82):DC(P3) DC(O83):DG(P2) DC(O84):DG(P1) chainC (146) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ILE193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TRP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) GLU201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ILE356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) ARG381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) PRO408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) GLU415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) THR419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (410) PHE425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) GLU452 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG453 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) VAL458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (281) GLN287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 (495) ALA501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (496) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (534) GLN540 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (856) THR862 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 6) VAL215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LYS216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) LEU219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ILE222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LYS224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ASN282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LEU285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) VAL287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) TYR293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) THR294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) PHE300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) LYS322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) SER327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) THR328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) TYR329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) THR331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) TRP332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TRP333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) ARG335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) GLN336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) THR339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) VAL353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) HIS354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) LEU410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) GLU412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ASP415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (273) THR482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (274) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 12 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) GLU484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 26 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) ARG485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 6) ARG11 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence astaplrisfakikeplevpnllalqtesfdwllgndawkarvesalesgqdvptksgleeifeeispiedfsgsmsltfrdhrfeppknsideckdrdftyaaplfvtaeftnnetgeiksqtvfmgdfplmtnkgtfvingteRvvvsqlvRspgvyfdssidktsdkdifsakiIpsrgaWlEmeidkrdmvgvridrkrkqsvtvllkalgwtteqileefgeyesmratlekdhtqgqddalldiyrklrpgepptreaaqtllenlyfnpkrydlakvgrykvnkklgadepldagvlttddviatikylvklhagetetvgesgreivvetddIdhfgnRrirnvgeliqnqvrtglaRmervvrErmttqdveaitpqtlinirPvvasikEffgTsqlsqFmdqnnplsglthkrrlnalgpggLsrERagfeVrdvhpshygrmcpietpegpnigligslasygrinpfgfietpyrkvvegqvtddvdyltadeedrfviaqanaalgddmrfaearvlvrrrggevdyvpgddvdymdvsprqmvsvatamipflehddanralmganmmrqavpliksesplvgtgmeyrsaadagdvvkaekagvvqevsadyitttnddgtyityrlakfsrsnqgtsvnqkvivaegdriiegqvladgpatengemalgknllvafmpweghnyedaiilsqrlvqddvlssihieehevdardtklgpeeitrdipnvseevladldergiirigaevvagdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgeigkvigvrvfdreegdelppgvnqlvrvyvaqkrkitdgdklagrhgnkgviskinpiedmpfledgtpvdiilnplavpsrmnpgqvleihlgwlasrgwdvsglaeewaqrlqvigadkvepgtnvatpvfdgaredelagllqhtipnrdgermvlpsgkarlfdgrsgepfpepisvgymyilklhhlvddklharstgpysmitqqplggkaqfggqrfgemevwaleaygaayalqelltiksddvtgrvkvyeaivkgenipepgipesfkvlikemqslclnvevlssdgmsie/fdelriglataddirqwshgevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekviyfaaymitfvdeerrtrdlpsleahvsverqqieqrrdsdlearakkletdlaeleaegakadvrrkvregaeremkqlrdraqreidrldevwnrfknlkvqdlegdellyrelrdrfgtyfdgsmgaaalqkrlesfdldeeaerlreiirtgkgQkktralkrlkvvsaflqtsnspkgmvldcvpvippdlrpmvqldggrfatsdlndlyrrvinrnnrlkrlldlgapeiivnnekrmlqeavdalfdngrrgrpvtgpgnrplkslsdmlkgkqgrfrqnllgkrvdysarsvivvgpqlklhqcglpkamalelfkpfvmkrlvdlnhaqniksakrmvergrtvvydvleeviaehpvllnrAPtlhrlgiqafepqlvegkaiqihplvctafnadfdgdQmavhlplsaeaqaearilmlssnnilkpadgrpvtmptqdmvlglfflttdsegrspkgegrafgssaeaimafdagdltlqakidirfpvgtipprgfeppareegepewqqgdtftlkttlgralfnellpedypfvdyevgkkqlseivndlaerypkvivaatldnlkaagffwatrsgvtvaisdivvpdakkeivkgyegqdekvqkqyerglitkeertqeliaiwtkatnevaeamndnfpktnpvsmmvnsgargnmmqmrqiagmrglvsnaknetiprpikasfreglsvleyfisthgarkgladtalrTadsgyltrrlvdvsqdviireedcgterglklpiatrdadgtlrkaedvetsvyarmlaedvvidgkviapanvdlgdvlidalvahgveevktrsiltcesqvgtcamcygrslatgklvdigeavgiiaaqsigepgtqltmrtfhtggvagdditqglprvvelfeartpkgvapiseasgrvrieetektkkivvtpddgsdetafpiskrarllvgegdhvevgqkltvgatnphdvlrilgqravqvhlvgevqkvynsqgvsihdkhieiiirqmlrrvtiiesgdaellpgelvertkfetenrrvvqegghpasgrpqlmgitkaslateswlsaasfqettrvltdaainaksdsliglkenviigklipagtglsryrnirvepteeakaam/atadpVKdyLkqIgKvpLlnaeqevelakrieaglfaedklansdklapklkreleiiaedgrraknhlleaNlRLvVslakrYTgRgmlFldliqegnlgliravekfdytKgYkfSTYaTWWiRQaiTRamadqartiripVHmvevinklarvqrqmlqdlgreptpeelakeldmtpekvievqkygrepislhtpLgEdgDsefgdliedseavvpadavsftllqeqlhsvldtlsereagvvsmrfgltdgqpktldeigkvygvTRERiRqiesktmsklrhpsrsqvlrdyl/ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvyRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvyRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga >7vpz_N:"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF STREPTOMYCES COELICOLOR TRANSCRIPTION INITIAL COMPLEX WITH ONE ZUR DIMER organism=? DNA sequence DG(P1):DC(O84) DG(P2):DC(O83) DC(P3):DG(O82) DG(P4):DC(O81) DA(P5):DT(O80) DC(P6):DG(O79) DC(P7):DG(O78) DC(P8):DG(O77) DG(P9):DC(O76) DG(P10):DC(O75) DC(P11):DG(O74) DG(P12):DC(O73) DC(P13):DG(O72) DC(P14):DG(O71) DG(P15):DG(O70) DC(P16):DC(O69) DC(P17):DC(O68) DT(P18):DT(O67) DA(P19):DA(O66) DC(P20):DC(O65) DG(P21):DG(O64) DG(P22):DG(O63) DT(P23):DT(O62) DC(P24):DC(O61) DA(P25):DA(O60) DG(P26):DG(O59) DT(P27):DT(O58) DA(P28):DT(O57) DC(P29):DG(O56) DT(P30):DA(O55) DA(P31):DT(O54) DC(P32):DG(O53) DG(P33):DC(O52) DG(P34):DC(O51) DG(P35):DC(O50) DT(P36):DA(O49) DA(P37):DT(O48) DG(P38):DC(O47) DG(P39):DC(O46) DG(P40):DC(O45) DG(P41):DC(O44) DG(P42):DC(O43) DT(P43):DA(O42) DA(P44):DT(O41) DT(P45):DA(O40) DC(P46):DG(O39) DG(P47):DC(O38) DG(P48):DC(O37) DG(P49):DC(O36) DC(P50):DG(O35) DA(P51):DT(O34) DA(P52):DT(O33) DC(P53):DG(O32) DG(P54):DC(O31) DC(P55):DG(O30) DG(P56):DC(O29) DG(P57):DC(O28) DC(P58):DG(O27) DA(P59):DT(O26) DC(P60):DG(O25) DT(P61):DA(O24) DG(P62):DC(O23) DA(P63):DT(O22) DA(P64):DT(O21) DC(P65):DG(O20) DA(P66):DT(O19) DC(P67):DG(O18) DC(P68):DG(O17) DG(P69):DC(O16) DT(P70):DA(O15) DG(P72):DC(O13) DT(P73):DA(O12) DC(P74):DG(O11) DA(P75):DT(O10) DT(P76):DA(O9) DG(P77):DC(O8) DT(P78):DA(O7) DG(P79):DC(O6) DC(P80):DG(O5) DC(P81):DG(O4) DT(P82):DA(O3) DT(P83):DA(O2) DG(P84):DC(O1) chainN ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 prot.sequence ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvyRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga >7vru_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF PACII_M1M2S-DNA-SAH COMPLEX organism=? DNA sequence DC(I-25):DG(H25) DT(I-24):DA(H24) DG(I-23):DC(H23) DT(I-22):DA(H22) DT(I-21):DA(H21) DG(I-20):DC(H20) DC(I-19):DG(H19) DA(I-18):DT(H18) DA(I-17):DT(H17) DT(I-16):DA(H16) DA(I-15):DT(H15) DG(I-14):DC(H14) DT(I-13):DA(H13) DG(I-12):DC(H12) DC(I-11):DG(H11) DG(I-10):DC(H10) DG(I-9):DC(H9) DG(I-8):DC(H8) DT(I-7):DA(H7) DT(I-6):DA(H6) DT(I-5):DA(H5) DT(I-4):DA(H4) DC(I-3):DG(H3) DG(I-2):DC(H2) DA(I-1):DT(H1) chainA (170) GLU170 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) SER280 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ILE369 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (401) ARG401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 prot.sequence mtlinlkdleahlwhaahiitgpidasdyktyifpilffkricdvydeefqdvlakvgsaelarekifhriqvplgchwddvfaknhdigkalkdaflgieqanaplhgifgdaswtnkerlpdellatllnhfnqvnlgvasvrnddmgrayeylikrfadkankkagEfytprtivrlmvnildpqagesvydpacgtggmlletihhvrenagdprllklkgqeknltteaiarmnlflhgqedfeivrgdtlrdpkfliydrletfdcvianppfSlsewgheqwaadaygrnkyglapktngdfawvqhmfaslndngrmavvlphgvlfrgaaegrirtsllkenrieaiigvapnlfygtaIpacilllrkqrpkahrdhvliinaeeiftkgRaqntlsngqadqiyqtylqqyqqgpdaqplegvarwvplseiaendfnlniaryvqkpleetitveealkdfqqklaaleqaeqeleellikegfe >7vru_ABC:S-adenosyl-L-methionine-dependent_methyltransferases;DNA_methylase_specificity_domain; title=CRYSTAL STRUCTURE OF PACII_M1M2S-DNA-SAH COMPLEX organism=? DNA sequence DC(I-25):DG(H25) DT(I-24):DA(H24) DG(I-23):DC(H23) DT(I-22):DA(H22) DT(I-21):DA(H21) DG(I-20):DC(H20) DC(I-19):DG(H19) DA(I-18):DT(H18) DA(I-17):DT(H17) DT(I-16):DA(H16) DA(I-15):DT(H15) DG(I-14):DC(H14) DT(I-13):DA(H13) DG(I-12):DC(H12) DC(I-11):DG(H11) DG(I-10):DC(H10) DG(I-9):DC(H9) DG(I-8):DC(H8) DT(I-7):DA(H7) DT(I-6):DA(H6) DT(I-5):DA(H5) DT(I-4):DA(H4) DC(I-3):DG(H3) DG(I-2):DC(H2) DA(I-1):DT(H1) chainB ( 20) TRP22 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLU26 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG29 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ALA178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (174) PHE180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 (279) ASN285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (282) TYR288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 (367) PHE373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (371) PRO377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 (372) MET378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (404) ARG410 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 16) ARG25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 66) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60 11 6 0 0 0 0 0 0 0 ( 67) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 24 0 0 0 0 0 0 0 0 0 ( 85) HIS94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 2 0 0 0 0 0 0 (122) LEU131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 (123) SER132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 (196) LYS209 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) SER212 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) TRP215 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG257 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) VAL270 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ALA272 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) SER273 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) ASN290 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) GLN291 0 0 0 0 0 0 9 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) ALA292 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) ALA328 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG329 0 0 0 0 0 0 0 82 6 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) PRO330 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ASN331 0 0 0 0 0 0 8 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (170) GLU170 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) SER280 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ILE369 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (401) ARG401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 prot.sequence mtlinlkdleahlwhaahiitgpidasdyktyifpilffkricdvydeefqdvlakvgsaelarekifhriqvplgchwddvfaknhdigkalkdaflgieqanaplhgifgdaswtnkerlpdellatllnhfnqvnlgvasvrnddmgrayeylikrfadkankkagEfytprtivrlmvnildpqagesvydpacgtggmlletihhvrenagdprllklkgqeknltteaiarmnlflhgqedfeivrgdtlrdpkfliydrletfdcvianppfSlsewgheqwaadaygrnkyglapktngdfawvqhmfaslndngrmavvlphgvlfrgaaegrirtsllkenrieaiigvapnlfygtaIpacilllrkqrpkahrdhvliinaeeiftkgRaqntlsngqadqiyqtylqqyqqgpdaqplegvarwvplseiaendfnlniaryvqkpleetitveealkdfqqklaaleqaeqeleellikegfe/eyqqhqasrlgkkkledllWgaaEflRgqidasdykqyifpllfykrlsdvyleeysenegdasyaampmfhrfhipqearwekvrdtrknigkaiqnalrliethnerlhgvfgdaqwtnkerlpdhlladliqhfskiplgiksvaqddlgeayeylikkfaddsghtaAeFytnrtvvhlmtrimglkpgetaydptcgtggmllnavmdlrnegkewrsvklygqevnlltsaiarmnmflheieefevlrgdtlaepkfiegdqlkqfdvifaNppYsikkwnrdkfaadpygrnlygvppqgcadygfythiikslkpdtgraamlwphgvlfrdseqairkqviesdiieaviglgpnlFynsPMescvvvlncnkpaerkgkilfingvehvtreRahsrlsdddltvlieaysapdkqpaitalvdievirenqhnlsiplyvqaadneevhdiehaieawkvsrvqlkkqtsklfkslaelgye/wqmvkfgdiakhiskRvepsetdldiyvglehldpdslkikrygvpsdvagqkllvkkgqiifgkRRayqrkvavadwdcicsaHamvleplsdkvipeflpffmqsdsfmnravaisegsLSptikwktlssqsflmpslttqatlikilskisevesslesaklslqllssafidelknwtivrageacslitKgaSprWqgfeyaadgslfvtseniqhwavdisspkyipdefseknlrRsqlragdvlvniVgASigrcalwdgshekaniNQAvallrpkpeldsrwllaqlyskrgqeyfglsavdnARPNlslkslsdfefylppieiqkktmdifelfsskvisnkkltlkaiksslvnn >7vru_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF PACII_M1M2S-DNA-SAH COMPLEX organism=? DNA sequence DT(H1):DA(I-1) DC(H2):DG(I-2) DG(H3):DC(I-3) DA(H4):DT(I-4) DA(H5):DT(I-5) DA(H6):DT(I-6) DA(H7):DT(I-7) DC(H8):DG(I-8) DC(H9):DG(I-9) DC(H10):DG(I-10) DG(H11):DC(I-11) DC(H12):DG(I-12) DA(H13):DT(I-13) DC(H14):DG(I-14) DT(H15):DA(I-15) DA(H16):DT(I-16) DT(H17):DA(I-17) DT(H18):DA(I-18) DG(H19):DC(I-19) DC(H20):DG(I-20) DA(H21):DT(I-21) DA(H22):DT(I-22) DC(H23):DG(I-23) DA(H24):DT(I-24) DG(H25):DC(I-25) chainB ( 20) TRP22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 ( 24) GLU26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 27) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 (172) ALA178 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) PHE180 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) ASN285 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) TYR288 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (367) PHE373 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) PRO377 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) MET378 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) ARG410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 prot.sequence eyqqhqasrlgkkkledllWgaaEflRgqidasdykqyifpllfykrlsdvyleeysenegdasyaampmfhrfhipqearwekvrdtrknigkaiqnalrliethnerlhgvfgdaqwtnkerlpdhlladliqhfskiplgiksvaqddlgeayeylikkfaddsghtaAeFytnrtvvhlmtrimglkpgetaydptcgtggmllnavmdlrnegkewrsvklygqevnlltsaiarmnmflheieefevlrgdtlaepkfiegdqlkqfdvifaNppYsikkwnrdkfaadpygrnlygvppqgcadygfythiikslkpdtgraamlwphgvlfrdseqairkqviesdiieaviglgpnlFynsPMescvvvlncnkpaerkgkilfingvehvtreRahsrlsdddltvlieaysapdkqpaitalvdievirenqhnlsiplyvqaadneevhdiehaieawkvsrvqlkkqtsklfkslaelgye >7vru_C:DNA_methylase_specificity_domain; title=CRYSTAL STRUCTURE OF PACII_M1M2S-DNA-SAH COMPLEX organism=? DNA sequence DC(I-25):DG(H25) DT(I-24):DA(H24) DG(I-23):DC(H23) DT(I-22):DA(H22) DT(I-21):DA(H21) DG(I-20):DC(H20) DC(I-19):DG(H19) DA(I-18):DT(H18) DA(I-17):DT(H17) DT(I-16):DA(H16) DA(I-15):DT(H15) DG(I-14):DC(H14) DT(I-13):DA(H13) DG(I-12):DC(H12) DC(I-11):DG(H11) DG(I-10):DC(H10) DG(I-9):DC(H9) DG(I-8):DC(H8) DT(I-7):DA(H7) DT(I-6):DA(H6) DT(I-5):DA(H5) DT(I-4):DA(H4) DC(I-3):DG(H3) DG(I-2):DC(H2) DA(I-1):DT(H1) chainC ( 16) ARG25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 66) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60 11 6 0 0 0 0 0 0 0 ( 67) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 24 0 0 0 0 0 0 0 0 0 ( 85) HIS94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 2 0 0 0 0 0 0 (122) LEU131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 (123) SER132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 (196) LYS209 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) SER212 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) TRP215 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG257 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) VAL270 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ALA272 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) SER273 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) ASN290 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) GLN291 0 0 0 0 0 0 9 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) ALA292 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) ALA328 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG329 0 0 0 0 0 0 0 82 6 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) PRO330 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ASN331 0 0 0 0 0 0 8 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence wqmvkfgdiakhiskRvepsetdldiyvglehldpdslkikrygvpsdvagqkllvkkgqiifgkRRayqrkvavadwdcicsaHamvleplsdkvipeflpffmqsdsfmnravaisegsLSptikwktlssqsflmpslttqatlikilskisevesslesaklslqllssafidelknwtivrageacslitKgaSprWqgfeyaadgslfvtseniqhwavdisspkyipdefseknlrRsqlragdvlvniVgASigrcalwdgshekaniNQAvallrpkpeldsrwllaqlyskrgqeyfglsavdnARPNlslkslsdfefylppieiqkktmdifelfsskvisnkkltlkaiksslvnn >7vs4_ABC:S-adenosyl-L-methionine-dependent_methyltransferases;DNA_methylase_specificity_domain; title=CRYSTAL STRUCTURE OF PACII_M1M2S-DNA(M6A)-SAH COMPLEX organism=? DNA sequence DC(I-25):DG(H25) DT(I-24):DA(H24) DG(I-23):DC(H23) DT(I-22):DA(H22) DT(I-21):DA(H21) DG(I-20):DC(H20) DC(I-19):DG(H19) DA(I-18):DT(H18) 6MA(I-17):DT(H17) DT(I-16):DA(H16) DA(I-15):DT(H15) DG(I-14):DC(H14) DT(I-13):DA(H13) DG(I-12):DC(H12) DC(I-11):DG(H11) DG(I-10):DC(H10) DG(I-9):DC(H9) DG(I-8):DC(H8) DT(I-7):DA(H7) DT(I-6):DA(H6) DT(I-5):DA(H5) DT(I-4):DA(H4) DC(I-3):DG(H3) DG(I-2):DC(H2) DA(I-1):DT(H1) chainA (170) GLU170 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) SER280 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ILE369 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (401) ARG401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 chainB ( 21) TRP22 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ALA25 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU26 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG29 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) PHE169 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ALA178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (174) PHE180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 (279) ASN285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (282) TYR288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 (367) PHE373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (371) PRO377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 (372) MET378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 chainC ( 16) ARG25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 66) ARG75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60 11 7 0 0 0 0 0 0 0 ( 67) ARG76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 24 0 0 0 0 0 0 0 0 0 ( 85) HIS94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 2 0 0 0 0 0 0 (122) LEU131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 (123) SER132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 1 0 0 0 0 0 0 0 (200) LYS209 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) SER212 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) TRP215 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG257 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) VAL270 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ALA272 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) SER273 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ASN290 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) GLN291 0 0 0 0 0 0 9 48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) ALA292 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) ALA328 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG329 0 0 0 0 0 0 0 80 8 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) PRO330 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (322) ASN331 0 0 0 0 0 0 7 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mtlinlkdleahlwhaahiitgpidasdyktyifpilffkricdvydeefqdvlakvgsaelarekifhriqvplgchwddvfaknhdigkalkdaflgieqanaplhgifgdaswtnkerlpdellatllnhfnqvnlgvasvrnddmgrayeylikrfadkankkagefytprtivrlmvnildpqagesvydpacgtggmlletihhvrenagdprllklkgqeknltteaiarmnlflhgqedfeivrgdtlrdpkfliydrletfdcvianppfslsewgheqwaadaygrnkyglapktngdfawvqhmfaslndngrmavvlphgvlfrgaaegrirtsllkenrieaiigvapnlfygtaIpacilllrkqrpkahrdhvliinaeeiftkgRaqntlsngqadqiyqtylqqyqqgpdaqplegvarwvplseiaendfnlniaryvqkpltitveealkdfqqklaaleqaeqeleellikegfe/ieyqqhqasrlgkkkledllwgaaeflrgqidasdykqyifpllfykrlsdvyleeyseegdasyaampmfhrfhipqearwekvrdtrknigkaiqnalrliethnerlhgvfgdaqwtnkerlpdhlladliqhfskiplgiksvaqddlgeayeylikkfaddsghtaAeFytnrtvvhlmtrimglkpgetaydptcgtggmllnavmdlrnegkewrsvklygqevnlltsaiarmnmflheieefevlrgdtlaepkfiegdqlkqfdvifaNppYsikkwnrdkfaadpygrnlygvppqgcadygfythiikslkpdtgraamlwphgvlfrdseqairkqviesdiieaviglgpnlFynsPMescvvvlncnkpaerkgkilfingvehvtrerahsrlsdddltvlieaysapdkqpaitalvdievirenqhnlsiplyvqaadneevhdiehaieawkvsrvqlkkqtsklfkslaelgye/wqmvkfgdiakhiskRvepsetdldiyvglehldpdslkikrygvpsdvagqkllvkkgqiifgkRRayqrkvavadwdcicsaHamvleplsdkvipeflpffmqsdsfmnravaisegsLSptikwktlssqsflmpslttqatlikilskisevesslesaklslqllssafidellnhdknwtivrageacslitKgaSprWqgfeyaadgslfvtseniqhwavdisspkyipdefseknlrRsqlragdvlvniVgASigrcalwdgshekaniNQAvallrpkpeldsrwllaqlyskrgqeyfglsavdnARPNlslkslsdfefylppieiqkktmdifelfsskvisnkkltlkaiksslvnns >7vs4_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF PACII_M1M2S-DNA(M6A)-SAH COMPLEX organism=? DNA sequence DC(I-25):DG(H25) DT(I-24):DA(H24) DG(I-23):DC(H23) DT(I-22):DA(H22) DT(I-21):DA(H21) DG(I-20):DC(H20) DC(I-19):DG(H19) DA(I-18):DT(H18) 6MA(I-17):DT(H17) DT(I-16):DA(H16) DA(I-15):DT(H15) DG(I-14):DC(H14) DT(I-13):DA(H13) DG(I-12):DC(H12) DC(I-11):DG(H11) DG(I-10):DC(H10) DG(I-9):DC(H9) DG(I-8):DC(H8) DT(I-7):DA(H7) DT(I-6):DA(H6) DT(I-5):DA(H5) DT(I-4):DA(H4) DC(I-3):DG(H3) DG(I-2):DC(H2) DA(I-1):DT(H1) chainB ( 21) TRP22 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ALA25 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU26 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG29 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) PHE169 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ALA178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (174) PHE180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 (279) ASN285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (282) TYR288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 (367) PHE373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (371) PRO377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 (372) MET378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence ieyqqhqasrlgkkkledllwgaaeflrgqidasdykqyifpllfykrlsdvyleeyseegdasyaampmfhrfhipqearwekvrdtrknigkaiqnalrliethnerlhgvfgdaqwtnkerlpdhlladliqhfskiplgiksvaqddlgeayeylikkfaddsghtaAeFytnrtvvhlmtrimglkpgetaydptcgtggmllnavmdlrnegkewrsvklygqevnlltsaiarmnmflheieefevlrgdtlaepkfiegdqlkqfdvifaNppYsikkwnrdkfaadpygrnlygvppqgcadygfythiikslkpdtgraamlwphgvlfrdseqairkqviesdiieaviglgpnlFynsPMescvvvlncnkpaerkgkilfingvehvtrerahsrlsdddltvlieaysapdkqpaitalvdievirenqhnlsiplyvqaadneevhdiehaieawkvsrvqlkkqtsklfkslaelgye >7vup_A:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF NF-KB P52 HOMODIMER BOUND TO +1/-1 SWAP P-SELECTIN KB DNA FRAGMENT organism=Homo sapiens DNA sequence DA(D2):DT(C17) DA(D3):DT(C16) DG(D4):DC(C15) DG(D5):DC(C14) DG(D6):DC(C13) DG(D7):DC(C12) DG(D8):DC(C11) DA(D9):DT(C10) DG(D10):DC(C9) DT(D11):DA(C8) DC(D12):DG(C7) DC(D13):DG(C6) DC(D14):DG(C5) DC(D15):DG(C4) DT(D16):DA(C2) DG(D18):DC(C1) chainA ( 19) ARG52 0 0 0 0 13 9 2 0 0 0 0 0 0 0 0 0 ( 21) ARG54 0 0 0 4 11 1 0 0 0 0 0 0 0 0 0 0 ( 22) TYR55 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 ( 24) CYS57 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 25) GLU58 0 0 0 0 1 3 6 0 0 0 0 0 0 0 0 0 ( 28) SER61 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) HIS62 0 0 1 7 4 0 0 0 0 0 0 0 0 0 0 0 (188) LYS221 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence tadgpylviveqpkqrgfRfRYgCEgpSHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrasdgsfslplkpvisqpihdsKspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyyplv >7vup_AB:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF NF-KB P52 HOMODIMER BOUND TO +1/-1 SWAP P-SELECTIN KB DNA FRAGMENT organism=Homo sapiens DNA sequence DC(C1):DG(D18) DA(C2):DT(D16) DG(C4):DC(D15) DG(C5):DC(D14) DG(C6):DC(D13) DG(C7):DC(D12) DA(C8):DT(D11) DC(C9):DG(D10) DT(C10):DA(D9) DC(C11):DG(D8) DC(C12):DG(D7) DC(C13):DG(D6) DC(C14):DG(D5) DC(C15):DG(D4) DT(C16):DA(D3) DT(C17):DA(D2) chainA ( 19) ARG52 0 0 0 0 0 0 0 0 0 2 9 13 0 0 0 0 ( 21) ARG54 0 0 0 0 0 0 0 0 0 0 1 11 4 0 0 0 ( 22) TYR55 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 ( 24) CYS57 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 25) GLU58 0 0 0 0 0 0 0 0 0 6 3 1 0 0 0 0 ( 28) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 29) HIS62 0 0 0 0 0 0 0 0 0 0 0 4 7 1 0 0 (188) LYS221 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chainB ( 19) ARG52 0 0 0 5 12 2 0 0 0 0 0 0 0 0 0 0 ( 21) ARG54 0 0 3 10 1 0 0 0 0 0 0 0 0 0 0 0 ( 22) TYR55 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 ( 24) CYS57 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 25) GLU58 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 ( 28) SER61 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) HIS62 0 0 12 7 0 0 0 0 0 0 0 0 0 0 0 0 (188) LYS221 0 0 0 0 1 10 2 0 0 0 0 0 0 0 0 0 prot.sequence tadgpylviveqpkqrgfRfRYgCEgpSHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrasdgsfslplkpvisqpihdsKspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyyplv/tadgpylviveqpkqrgfRfRYgCEgpSHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrasdgsfslplkpvisqpihdsKspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyyplv >7vuq_A:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF NF-KB P52 HOMODIMER BOUND TO A/T-CENTRIC P-SELECTIN KB DNA FRAGMENT organism=Homo sapiens DNA sequence DC(C1):DG(D18) DA(C2):DT(D17) DA(C3):DT(D16) DG(C4):DC(D15) DG(C5):DC(D14) DG(C6):DC(D13) DG(C7):DC(D12) DT(C8):DA(D11) DT(C9):DA(D10) DA(C10):DT(D9) DC(C11):DG(D8) DC(C12):DG(D7) DC(C13):DG(D6) DC(C14):DG(D5) DC(C15):DG(D4) DT(C16):DA(D3) DT(C17):DA(D2) chainA ( 19) ARG52 0 0 0 0 0 0 0 0 0 0 1 11 5 0 0 0 0 ( 21) ARG54 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 ( 22) TYR55 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 24) CYS57 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 25) GLU58 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 ( 28) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 29) HIS62 0 0 0 0 0 0 0 0 0 0 0 0 4 11 2 0 0 prot.sequence tadgpylviveqpkqrgfRfRYgCEgpSHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrasdgsfslplkpvisqpihdskspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyyplv >7vuq_AB:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF NF-KB P52 HOMODIMER BOUND TO A/T-CENTRIC P-SELECTIN KB DNA FRAGMENT organism=Homo sapiens DNA sequence DC(C1):DG(D18) DA(C2):DT(D17) DA(C3):DT(D16) DG(C4):DC(D15) DG(C5):DC(D14) DG(C6):DC(D13) DG(C7):DC(D12) DT(C8):DA(D11) DT(C9):DA(D10) DA(C10):DT(D9) DC(C11):DG(D8) DC(C12):DG(D7) DC(C13):DG(D6) DC(C14):DG(D5) DC(C15):DG(D4) DT(C16):DA(D3) DT(C17):DA(D2) chainB ( 19) ARG52 0 0 0 0 1 13 2 0 0 0 0 0 0 0 0 0 0 ( 21) ARG54 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) TYR55 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 24) CYS57 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 25) GLU58 0 0 0 0 1 7 6 0 0 0 0 0 0 0 0 0 0 ( 28) SER61 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) HIS62 0 0 2 13 6 0 0 0 0 0 0 0 0 0 0 0 0 (188) LYS221 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 chainA ( 19) ARG52 0 0 0 0 0 0 0 0 0 0 1 11 5 0 0 0 0 ( 21) ARG54 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 ( 22) TYR55 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 24) CYS57 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 25) GLU58 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 ( 28) SER61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 29) HIS62 0 0 0 0 0 0 0 0 0 0 0 0 4 11 2 0 0 prot.sequence tadgpylviveqpkqrgfRfRYgCEgpSHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrasdgsfslplkpvisqpihdskspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyyplv/tadgpylviveqpkqrgfRfRYgCEgpSHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrasdgsfslplkpvisqpihdsKspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyyplv >7vw3_A: title=CRYO-EM STRUCTURE OF SACAS9-SGRNA-DNA TERNARY COMPLEX organism=? DNA sequence DT(D29):DA(C31) DC(D30):DG(C30) DG(D31):DC(C29) DT(D32):DA(C28) DT(D33):DA(C27) DC(D34):DG(C26) DA(D35):DT(C25) DT(D36):DA(C24) DG(D37):DC(C23) DT(D38):DA(C22) DT(D39):DA(C21) DG(D40):DC(C20) DA(D41):DT(C19) DA(D42):DT(C18) DT(D43):DA(C17) DG(D44):DC(C16) DT(D45):DA(C15) DT(D46):DA(C14) DT(D47):DA(C13) DT(D48):DA(C12) DA(D49):DT(C11) DG(D50):DC(C10) DT(D51):DA(C9) DA(D52):DT(C8) DC(D53):DG(C7) DT(D54):DA(C6) DC(D55):DG(C5) DT(D56):DA(C4) chainA (210) TYR211 0 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) LEU233 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (481) LYS482 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (482) ASN483 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (612) LYS613 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (616) ARG617 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (618) SER619 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (619) LYS620 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (628) GLU629 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (629) ARG630 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (634) PHE635 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (635) SER636 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (639) ASP640 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (643) ARG644 0 0 0 0 0 0 2 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (645) LEU646 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (685) ARG686 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (691) LYS692 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (693) ARG694 0 0 0 3 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (694) ASN695 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (785) ASP786 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (907) SER908 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (984) ASN985 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (990) ARG991 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 (1001) ARG1002 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1002) GLU1003 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1005) GLU1006 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1012) PRO1013 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1014) ARG1015 0 0 0 0 0 0 0 0 0 0 12 17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krnyilglaigitsvgygiidyetrdvidagvrlfkeanvennegrrskrgarrlkrrrrhriqrvkkllfdynlltdhselsginpyearvkglsqklseeefsaallhlakrrgvhnvneveedtgnelstkeqisrnskaleekyvaelqlerlkkdgevrgsinrfktsdyvkeakqllkvqkayhqldqsfidtyidlletrrtYyegpgegspfgwkdikewyemLmghctyfpeelrsvkyaynadlynalndlnnlvitrdenekleyyekfqiienvfkqkkkptlkqiakeilvneedikgyrvtstgkpeftnlkvyhdikditarkeiienaelldqiakiltiyqssediqeeltnlnseltqeeieqisnlkgytgthnlslkainlildelwhtndnqiaifnrlklvpkkvdlsqqkeipttlvddfilspvvkrsfiqsikvinaiikkyglpndiiielareKNskdaqkminemqkrnrqtnerieeiirttgkenakyliekiklhdmqegkclysleaipledllnnpfnyevdhiiprsvsfdnsfnnkvlvkqeeaskkgnrtpfqylsssdskisyetfkkhilnlaKgkgRiSKtkkeylleERdinrFSvqkDfinRnLvdtryatrglmnllrsyfrvnnldvkvksinggftsflrRkwkfkKeRNkgykhhaedaliianadfifkewkkldkakkvmenqmfeekqaesmpeieteqeykeifitphqikhikdfkdykyshrvdkkpnrelinDtlystrkddkgntlivnnlnglydkdndklkklinkspekllmyhhdpqtyqklklimeqygdeknplykyyeetgnyltkyskkdngpvikkikyygnklnahlditddypnsrnkvvklSlkpyrfdvyldngvykfvtvknldvikkenyyevnskcyeeakklkkisnqaefiasfynndlikingelyrvigvNndllnRievnmidityREylEnmndkrPpRiiktiasktqsikkystdilgnlyevkskkhpqiikkg >7vwy_CDFG:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYSTAL STRUCTURE OF (+)-PULEGONE REDUCTASE FROM MENTHA PIPERITA organism=? DNA sequence DG(126):DC(265) DA(127):DT(264) DC(128):DG(263) DA(129):DT(262) DG(130):DC(261) DC(131):DG(260) DA(132):DT(259) DC(133):DG(258) DT(134):DA(257) DG(135):DC(256) DA(136):DT(255) DA(137):DT(254) DT(138):DA(253) DG(139):DC(252) DT(140):DA(251) DC(141):DG(250) DA(142):DT(249) DA(143):DT(248) DA(144):DT(247) DA(145):DT(246) DC(146):DG(245) DA(147):DT(244) DA(148):DT(243) DA(149):DT(242) DA(150):DT(241) DC(151):DG(240) DC(152):DG(239) DT(153):DA(238) DT(154):DA(237) DC(155):DG(236) DA(156):DT(235) DC(157):DG(234) DT(158):DA(233) DC(159):DG(232) DG(160):DC(231) DC(161):DG(230) DA(162):DT(229) DA(163):DT(228) DC(164):DG(227) DT(165):DA(226) DA(166):DA(225) DT(167):DT(224) DA(168):DA(223) DA(169):DA(222) DT(170):DT(221) DG(171):DG(220) DG(172):DG(219) DG(173):DG(218) DA(174):DA(217) DG(175):DG(216) DC(176):DC(215) DT(177):DT(214) DG(178):DG(213) DT(179):DA(212) DC(180):DG(211) DA(181):DT(210) DC(182):DG(29) DG(183):DC(28) DG(184):DC(27) DA(185):DT(26) DT(186):DA(25) DG(187):DC(24) DC(188):DG(23) DA(189):DT(22) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (173) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 6 0 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) PRO375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 (565) PRO567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainD (300) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (451) GLN465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (773) ALA787 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 chainF ( 4) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (331) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (379) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (454) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 32) SER34 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) TRP36 0 0 0 0 0 15 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) HIS37 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLN39 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG40 0 0 0 3 19 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) LYS43 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG90 0 0 0 0 0 0 0 0 0 0 0 0 5 19 4 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) LYS93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgePptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkEffgSsqlsqfmvqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegPniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgSnKrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdQmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtAlkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/rttDpVRmyMremgtvellTregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNRglqfldliqegniglmkavdkFEyrRgYkfSTYaTWWirQaitrsiadqartiripvHmietiNklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismeTpIgDdedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtRerirqieakalrklrhpsrsevlrsfldd/qagiirdlliwleghldqplsldnvaakagySkWHlQRmfKdvtghaigayirarrlsksavalrltarpildialqyrfdsqQTftRafKkqfaqtpalyrrspewsafgirpplrlgeftmpehkfvtledtpligvtqsyscsleqisdfrhemryqfwhdflgnaptippvlyglnetrpsqdkddeqevfyttalaqdqadgyvltghpvmlqggeyvmftyeglgtgvqefiltvygtcmpmlnltrrkgqdieryypaeddrpinlrcellipirr >7vwy_G:Probable_bacterial_effector-binding_domain;Homeodomain-like; title=CRYSTAL STRUCTURE OF (+)-PULEGONE REDUCTASE FROM MENTHA PIPERITA organism=? DNA sequence DT(22):DA(189) DG(23):DC(188) DC(24):DG(187) DA(25):DT(186) DT(26):DA(185) DC(27):DG(184) DC(28):DG(183) DG(29):DC(182) DT(210):DA(181) DG(211):DC(180) DA(212):DT(179) DG(213):DG(178) DT(214):DT(177) DC(215):DC(176) DG(216):DG(175) DA(217):DA(174) DG(218):DG(173) DG(219):DG(172) DG(220):DG(171) DT(221):DT(170) DA(222):DA(169) DA(223):DA(168) DT(224):DT(167) DA(225):DA(166) DA(226):DT(165) DG(227):DC(164) DT(228):DA(163) DT(229):DA(162) DG(230):DC(161) DC(231):DG(160) DG(232):DC(159) DA(233):DT(158) DG(234):DC(157) DT(235):DA(156) DG(236):DC(155) DA(237):DT(154) DA(238):DT(153) DG(239):DC(152) DG(240):DC(151) DT(241):DA(150) DT(242):DA(149) DT(243):DA(148) DT(244):DA(147) DG(245):DC(146) DT(246):DA(145) DT(247):DA(144) DT(248):DA(143) DT(249):DA(142) DG(250):DC(141) DA(251):DT(140) DC(252):DG(139) DA(253):DT(138) DT(254):DA(137) DT(255):DA(136) DC(256):DG(135) DA(257):DT(134) DG(258):DC(133) DT(259):DA(132) DG(260):DC(131) DC(261):DG(130) DT(262):DA(129) DG(263):DC(128) DT(264):DA(127) DC(265):DG(126) chainG ( 32) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 34) TRP36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 15 0 0 0 0 0 ( 35) HIS37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 ( 37) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 ( 38) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 19 3 0 0 0 ( 41) LYS43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 ( 84) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 4 19 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) LYS93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qagiirdlliwleghldqplsldnvaakagySkWHlQRmfKdvtghaigayirarrlsksavalrltarpildialqyrfdsqQTftRafKkqfaqtpalyrrspewsafgirpplrlgeftmpehkfvtledtpligvtqsyscsleqisdfrhemryqfwhdflgnaptippvlyglnetrpsqdkddeqevfyttalaqdqadgyvltghpvmlqggeyvmftyeglgtgvqefiltvygtcmpmlnltrrkgqdieryypaeddrpinlrcellipirr >7vwz_CDFGI:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF ROB-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX IN A UNIQUE CONFORMATION organism=ESCHERICHIA COLI K-12 DNA sequence DG(126):DC(265) DA(127):DT(264) DC(128):DG(263) DA(129):DT(262) DG(130):DC(261) DC(131):DG(260) DA(132):DT(259) DC(133):DG(258) DT(134):DA(257) DG(135):DC(256) DA(136):DT(255) DA(137):DT(254) DT(138):DA(253) DG(139):DA(251) DC(141):DG(250) DA(142):DT(249) DA(143):DT(248) DA(144):DT(247) DA(145):DT(246) DC(146):DG(245) DA(147):DT(244) DA(149):DT(242) DA(150):DT(241) DC(151):DG(240) DC(152):DG(239) DT(154):DA(237) DC(155):DG(236) DA(156):DT(235) DC(157):DG(234) DT(158):DA(233) DC(159):DG(232) DG(160):DC(231) DC(161):DG(230) DA(162):DT(229) DA(163):DT(228) DC(164):DG(227) DT(165):DA(226) DA(166):DA(225) DT(167):DT(224) DA(168):DA(223) DA(169):DA(222) DT(170):DT(221) DG(171):DG(220) DG(172):DG(219) DG(173):DG(218) DA(174):DA(217) DG(175):DG(216) DC(176):DC(215) DT(177):DT(214) DG(178):DG(213) DT(179):DA(212) DC(180):DG(211) DA(181):DT(210) DC(182):DG(29) DG(183):DC(28) DG(184):DC(27) DA(185):DT(26) DT(186):DA(25) DG(187):DC(24) DC(188):DG(23) DA(189):DT(22) chainC (141) ARG143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (173) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 3 0 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (505) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (538) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 (539) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 chainD (304) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainF ( 4) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) LYS426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) ARG436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (368) GLU503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (376) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 30) SER34 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TRP36 0 0 0 0 13 23 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) HIS37 0 0 13 19 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN39 0 0 0 0 0 0 7 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG40 0 0 0 2 15 23 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS43 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG90 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) LYS94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingteRvivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgeptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkEffgSsqlsqfmvqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkspsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSnKRplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsyeemipkwrqlnvfegervergdvisdgpehdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/rttDpVRmyMRemgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkYtNRglqFldliqegniglmkavdkfEyrRgYKfSTYaTWWiRQaitrsIadqartiripvHmietinklnrisrqmlqemgrpeelaermlmpedkirkvlkiakEpismetpIgDdeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtrerirqieakalrklrhpsrsevlrsfldd/giirdlliwleghldqplsldnvaakagySkWHlQRmfKdvtghigyirarrlsksavalrltarpildialqyrfdsqQtftRafkKqfaqtpalyrrspewsafgirpplrl/eftmpehkfvtledtpligvtqsyscsleQiSDfRHemRyqfwhdflgnaptippvlyglnetrpsqdkddeqevfyttAlaqDqadGyvltghpvmlqggeyvmftyeglgtgvqefiltvygtcmpmlnltrrkgqdieryypaeddrpinlrcellipirr >7vwz_G:Homeodomain-like; title=CRYO-EM STRUCTURE OF ROB-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX IN A UNIQUE CONFORMATION organism=? DNA sequence DG(126):DC(265) DA(127):DT(264) DC(128):DG(263) DA(129):DT(262) DG(130):DC(261) DC(131):DG(260) DA(132):DT(259) DC(133):DG(258) DT(134):DA(257) DG(135):DC(256) DA(136):DT(255) DA(137):DT(254) DT(138):DA(253) DG(139):DA(251) DC(141):DG(250) DA(142):DT(249) DA(143):DT(248) DA(144):DT(247) DA(145):DT(246) DC(146):DG(245) DA(147):DT(244) DA(149):DT(242) DA(150):DT(241) DC(151):DG(240) DC(152):DG(239) DT(154):DA(237) DC(155):DG(236) DA(156):DT(235) DC(157):DG(234) DT(158):DA(233) DC(159):DG(232) DG(160):DC(231) DC(161):DG(230) DA(162):DT(229) DA(163):DT(228) DC(164):DG(227) DT(165):DA(226) DA(166):DA(225) DT(167):DT(224) DA(168):DA(223) DA(169):DA(222) DT(170):DT(221) DG(171):DG(220) DG(172):DG(219) DG(173):DG(218) DA(174):DA(217) DG(175):DG(216) DC(176):DC(215) DT(177):DT(214) DG(178):DG(213) DT(179):DA(212) DC(180):DG(211) DA(181):DT(210) DC(182):DG(29) DG(183):DC(28) DG(184):DC(27) DA(185):DT(26) DT(186):DA(25) DG(187):DC(24) DC(188):DG(23) DA(189):DT(22) chainG ( 30) SER34 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) TRP36 0 0 0 0 13 23 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) HIS37 0 0 13 19 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLN39 0 0 0 0 0 0 7 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG40 0 0 0 2 15 23 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS43 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG90 0 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) LYS94 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence giirdlliwleghldqplsldnvaakagySkWHlQRmfKdvtghigyirarrlsksavalrltarpildialqyrfdsqQtftRafkKqfaqtpalyrrspewsafgirpplrl >7vyx_B: title=CRYSTAL STRUCTURE OF THE SELENOMETHIONINE(SEMET)-DERIVED CAS12C1 (D969A) TERNARY COMPLEX organism=Escherichia coli DNA sequence DC(F19):DG(H8) DA(F20):DT(H7) DC(F21):DG(H6) DT(F22):DA(H5) DA(F23):DT(H4) DG(F24):DC(H3) DA(F25):DT(H2) DC(F26):DG(H1) chainB (145) ARG152 11 9 18 0 0 0 0 0 (290) ASN297 12 0 0 0 0 0 0 0 (292) ASN299 7 17 0 0 0 0 0 0 (295) SER302 0 2 0 0 0 0 0 0 (358) ARG374 1 8 0 0 0 0 0 0 (359) THR375 1 0 0 0 0 0 0 0 prot.sequence lhlisakasrkyrrtiaclsdtakkdlerrkqsgaadpaqelsclktikfklevpegsklpsfdrisqiynaletiekgslsyllfalilsgfrifpnssaaktfassscykndqfasqikeifgemvknfipselesilkkgrRknnkdwteenikrvlnsefgrknsegssalfdsflskfsqelfrkfdswnevnkkyleaaelldsmlasygpfdsvckmigdsdsrnslpdkstiaftnnaeitvdiessvmpymaiaallreyrqskskaapvayvqshltttNgNglSwffkfgldlirkapgskslqelfsvpddkldglkfikeacealpeasllcgekgellgyqdfRTsfaghidswvanyvnrlfelielvnshslelfeglvknvrqtlkklagidpneqdikefyafsdvlnrlgsirnqienlkklpklnglgggvpkqqelldkalesvkqirhyqridferviqwavnehcletvpkflvdaekkkinkesstdfaakenavrfllegigaaargktdsvskaaynwfvvnnflakkdlnryfincqgciykppyskrrslafalrsdnkdtievvwekfetfykeiskeiekfnifsqefqtflhlenlrmklllrriqkpipaeiaffslpqeyydslppnvafltpseyitqfnlyssflngnlillrrsrsylrakfswvgnskliyaakearlwkipnaywksdewkmildsnvlvfdkagnvlpaptlkkvceregdlrlfypllrqlphdwcyrnpfvksvgreknvievnkegepkvasalpgslfrligpapfksllddcffnpldkdlrecmlivdqeisqkveaqkveaslesctysiavpiryhleepkvsnqfenvlaiaqgeaglayavfslksigeaetkpiavgtiripsirrlihsvstyrkkkqrlqnfkqnydstafimrenvtgdvcakivglmkefnafpvleydsrqlsavykavnshflyfkepgrdalrkqlwyggdswtidgieivtrerkedgkegvekivplkvfpgrsvsarftsktcsccgrnvfdwlftekkafnvnskgelttadgviqlfeadrskgpkfyarrkertpltkpiakgsysleeierrvrtnlrrapkskqsrdtsqsqyfcvykdcalhfsgmqadenaainigrrfltalrkn >7vz4_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE COMPOSED OF THE WIDOM 601L DNA SEQUENCE organism=? DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DG(J68):DC(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 1) HIS39 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 1) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence HRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/NIQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/SrkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/HRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/NIQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/SrkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7vz4_G:Histone-fold; title=CRYO-EM STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE COMPOSED OF THE WIDOM 601L DNA SEQUENCE organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DC(I-68):DG(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DG(I68):DC(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp >7w1m_ABDEH:P-loop_containing_nucleoside_triphosphate_hydrolases;Smc_hinge_domain;ARM_repeat;"Winged_helix"_DNA-binding_domain;beta-beta-alpha_zinc_fingers; title=CRYO-EM STRUCTURE OF HUMAN COHESIN-CTCF-DNA COMPLEX organism=? DNA sequence DT(G7):DA(F112) DT(G8):DA(F111) DG(G9):DC(F110) DC(G10):DG(F109) DA(G11):DT(F108) DG(G12):DC(F107) DT(G13):DA(F106) DG(G14):DC(F105) DC(G15):DG(F104) DC(G16):DG(F103) DC(G17):DG(F102) DA(G18):DT(F101) DC(G19):DG(F100) DA(G20):DT(F99) DG(G21):DC(F98) DA(G22):DT(F97) DG(G23):DC(F96) DG(G24):DC(F95) DC(G25):DG(F94) DC(G26):DG(F93) DA(G27):DT(F92) DG(G28):DC(F91) DC(G29):DG(F90) DA(G30):DT(F89) DG(G31):DC(F88) DG(G32):DC(F87) DG(G33):DC(F86) DG(G34):DC(F85) DG(G35):DC(F84) DC(G36):DG(F83) DG(G37):DC(F82) DC(G38):DG(F81) DT(G39):DA(F80) DA(G40):DT(F79) DG(G41):DC(F78) DT(G42):DA(F77) DG(G43):DC(F76) DA(G44):DT(F75) DG(G45):DC(F74) DG(G46):DC(F73) DT(G47):DA(F72) DG(G48):DC(F71) DG(G49):DC(F70) DT(G50):DA(F69) DT(G51):DA(F68) DT(G52):DA(F67) DT(G53):DA(F66) DT(G54):DA(F65) DA(G55):DT(F64) DT(G56):DA(F63) DA(G57):DT(F62) DT(G58):DA(F61) DG(G59):DC(F60) DT(G60):DA(F59) DT(G61):DA(F58) DT(G62):DA(F57) DT(G63):DA(F56) DG(G64):DC(F55) DT(G65):DA(F54) DT(G66):DA(F53) DA(G67):DT(F52) DT(G68):DA(F51) DG(G69):DC(F50) DT(G70):DA(F49) DA(G71):DT(F48) DT(G72):DA(F47) DT(G73):DA(F46) DG(G74):DC(F45) DT(G75):DA(F44) DT(G76):DA(F43) DT(G77):DA(F42) DA(G78):DT(F41) DT(G79):DA(F40) DT(G80):DA(F39) DT(G81):DA(F38) DT(G82):DA(F37) DC(G83):DG(F36) DC(G84):DG(F35) DC(G85):DG(F34) DT(G86):DA(F33) DT(G87):DA(F32) DT(G88):DA(F31) DA(G89):DT(F30) DA(G90):DT(F29) DT(G91):DA(F28) DT(G92):DA(F27) DT(G93):DA(F26) DT(G94):DA(F25) DA(G95):DT(F24) DG(G96):DC(F23) DG(G97):DC(F22) DA(G98):DT(F21) DT(G99):DA(F20) DA(G100):DT(F19) DT(G101):DA(F18) DG(G102):DC(F17) DA(G103):DT(F16) DA(G104):DT(F15) DA(G105):DT(F14) DA(G106):DT(F13) DC(G107):DG(F12) DA(G108):DT(F11) DA(G109):DT(F10) DG(G110):DC(F9) DA(G111):DT(F8) DA(G112):DT(F7) DT(G113):DA(F6) chainA chainB chainD chainE chainH ( 22) ARG277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) SER279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) LEU308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) THR333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) SER334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLU336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 16 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) TYR343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) GLU362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) SER364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) LYS365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) TYR392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 17 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) ARG396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) GLN418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) THR421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) MET424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) LYS449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) SER450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) ASP451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ARG457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) LYS490 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) CYS504 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) GLN506 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) ARG508 0 0 0 0 0 0 0 0 0 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) HIS509 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) MET512 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) THR516 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG533 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) GLN534 0 0 0 0 4 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) LYS535 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) LEU537 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) ARG566 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gflklieienfksykgrqiigpfqrftaiigpngsgksnlmdaisfvlgektsnlrvktlrdlihgapvgkpaanrafvsmvyseegaedrtfarvivggsseykinnkvvqlheyseeleklgilikarnflvfqgavesiamknpkertalfeeisrsgelaqeydkrkkemvkaeedtqfnyhrkkniaaerkeakqameklesvrdkfqetsdefeaarkrakkakqafeqikkerfdrfnacfesvatnideiykalsrnssaqaflgpenpeepyldginyncvapgkrfrpmdnlsggektvaalallfaihsykpapffvldeidaaldntnigkvanyikeqstcnfqaivislkeefytkaesligvypeqgdcviskvltfdltkypd/myikqviiqgfrsyrdqtivdpfsskhnvivgrngsgksnffyaiqfvlsdefshlrpeqrlallhegtgprvisafveiifdnsdnrlpidkeevslrrvigakkdqyfldkkmvtkndvmnllesagfsrsnpyyivkqgkinqmatapdsqrlkllrevagtrvyderkeesislmketegkrekinellkyieerlhtleeekeelaqyqkwdkmrraleytiynqelnetrakldelsakretsgeksrqlinhdtkelekmtnrqgmllkkkeecmkkirelgslpqeafekyqtlslkqlfrkleqcntelkkyshvnkkaldqfvnfseqkeklikrqeeldrgyksimelmnvlelrkyeaiqltfkqvsknfsevfqklvpggkatlvmkkgqftgvgirvsftgkqgemremqqlsggqkslvalalifaiqkcdpapfylfdeidqaldaqhrkavsdmimelavhaqfitttfrpellesadkfygvkfrnkvshidvitaemakdfveddtthg/tlfevvklgksamqsvvddwiesykqdrdialldlinffiqcsgcrgtvriemfrnmqnaeiirkmteefdedsgdypltmpgpqwkkfrsnfcefigvlirqcqysiiydeymmdtvislltglsdsqvrafrhtstlaamklmtalvnvalnlsihqdntqrqyeaernkmigkranerlelllqkrkelqenqdeienmmnsifkgifvhryrdaiaeiraicieeigvwmkmysdaflndsylkyvgwtlhdrqgevrlkclkalqslytnrelfpklelftnrfkdrivsmtldkeydvaveairlvtlilhgseealsnedcenvyhlvysahrpvavaageflhkklfsrhdpqaeealakrrgrnspngnlirmlvlffleselhehaaylvdslwessqellkdwecmtellleepvqgeeamsdrqesalielmvctirqaaeahppvgrgtgkrvltakerktqiddrnkltehfiitlpmllskysadaekvanllqipqyfdleiystgrmekhldallkqikfvvekhvesdvleacsktysilcseeytiqnrvdiarsqlidefvdrfnhsvedllqegeeaddddiynvlstlkrltsfhnahdltkwdlfgncyrllktgiehgampeqivvqalqcshysilwqlvkitdgspskedllvlrktvksflavcqqclsnvntpvkeqafmllcdllmifshqlmtggreglqplvfnpdtglqsellsfvmdhvfidqdeenqsmegdeedeankiealhkrrnllaafskliiydivdmhaaadifkhymkyyndygdiiketlsktrqidkiqcaktlilslqqlfnelvqeqgpnldrtsahvsgikelarrfaltfgldqiktreavatlhkdgiefafkyqnqkgqeypppnlaflevlsefsskllrqdkktvhsylekflteqmmerredvwlplisyrnsl/mmdsstfkrftasienildnledmlllgkhqlnelgsesakikamgimdklstdktvkvlnilekniqdgsklserlwrdlimervtksadaclttinimtspnmpkavyiedvierviqytkfhlqntlypqydpvyrqrvivmlynkvcdivsslselleiqlltdttilqvssmgitpffvenvselqlcaiklvtavfsryekhrqlileeiftslarlptskrslrnfrlpmyiqmvtalvlqliqcvvhlpdvvitnsyetamrtaqnflsiflkkcgskqgeedyrplfenfvqdllstvnkpewpaaelllsllgrllvhqfsnkstemalrvasldylgtvaarlrkdavtskmdeiqqlqkalldyldentetdpslvfsrkfyiaqwfrdttletekkeiettgqimhraenrkkflrsdtvdyddaclivrylasmrpfaqsfdiyltqilrvlgenaiavrtkamkclsevvavdpsilarldmqrgvhgrlmdnstsvreaavellgrfvlcrpqlaeqyydmlierildtgisvrkrvikilrdicieqptfpkitemcvkmirrvndeegikklvnetfqklwftptphndkeamtrkilnitdvvaacrdtgydwfeqllqnllkseedssykpvkkactqlvdnlvehilkyeensgrlvacittlflfskirpqlmvkhamtmqpylttkcstqndfmvicnvakilelvvplmehpsetflatieedlmkliikygmtvvqhcvsclgavvnkvtqnfkfvwacfnryygaisklksqhqedpnntslltnkpallrslftvgalcrhfdfdledfkgnskvnikdkvlellmyftkhsdeevqtkaiiglgfafiqhpslmfeqevknlynnilsdknssvnlkiqvlknlqtylqeedtrmqqadrdwkkvakqedlkemgdvssgmsssimqlylkqvleaffhtqssvrhfalnvialtlnqglihpvqcvpyliamgtdpepamrnkadqqlveidkkyagfihmkavagmkmsyqvqqainsalcshlysmirgnrqhrraflisllnlfddtaktdvtmllyiadnlacfpyqtqeeplfimhhiditlsvsgsnllqsfkesliefanvsqgillllmlkqhlknlcgfsdskiqkyspsesakvydkainrktgvhfhpkqtldflrsdmanskiteevkrsivkqyldfkllmehl/vsvydfeeetfqcelcsytcpRrSnldRhmkshtderphkchlcgrafRtvtLlrnhlnthtgtrphkcpdcdmafvTSgElvRhrrYkhthekpfkcsmcdyasvEvSKlkRhirshtgerpfqcslcsyasrdtYKlkRhmrthsgekpyecyicharftQsgTmkMhilqkhtenvakfhcphcdtviaRKSDlgVhlRkqhsyieqgkkcrycdavfheryaliqhqkshKnekrfkcdqcdyaCrQeRHmiMhkrThtgekpyacshcdktfRQKqLldmhfkryhdpnfvpaafvcskcgktftRrntmarhadnc >7w1m_H:beta-beta-alpha_zinc_fingers; title=CRYO-EM STRUCTURE OF HUMAN COHESIN-CTCF-DNA COMPLEX organism=? DNA sequence DT(G7):DA(F112) DT(G8):DA(F111) DG(G9):DC(F110) DC(G10):DG(F109) DA(G11):DT(F108) DG(G12):DC(F107) DT(G13):DA(F106) DG(G14):DC(F105) DC(G15):DG(F104) DC(G16):DG(F103) DC(G17):DG(F102) DA(G18):DT(F101) DC(G19):DG(F100) DA(G20):DT(F99) DG(G21):DC(F98) DA(G22):DT(F97) DG(G23):DC(F96) DG(G24):DC(F95) DC(G25):DG(F94) DC(G26):DG(F93) DA(G27):DT(F92) DG(G28):DC(F91) DC(G29):DG(F90) DA(G30):DT(F89) DG(G31):DC(F88) DG(G32):DC(F87) DG(G33):DC(F86) DG(G34):DC(F85) DG(G35):DC(F84) DC(G36):DG(F83) DG(G37):DC(F82) DC(G38):DG(F81) DT(G39):DA(F80) DA(G40):DT(F79) DG(G41):DC(F78) DT(G42):DA(F77) DG(G43):DC(F76) DA(G44):DT(F75) DG(G45):DC(F74) DG(G46):DC(F73) DT(G47):DA(F72) DG(G48):DC(F71) DG(G49):DC(F70) DT(G50):DA(F69) DT(G51):DA(F68) DT(G52):DA(F67) DT(G53):DA(F66) DT(G54):DA(F65) DA(G55):DT(F64) DT(G56):DA(F63) DA(G57):DT(F62) DT(G58):DA(F61) DG(G59):DC(F60) DT(G60):DA(F59) DT(G61):DA(F58) DT(G62):DA(F57) DT(G63):DA(F56) DG(G64):DC(F55) DT(G65):DA(F54) DT(G66):DA(F53) DA(G67):DT(F52) DT(G68):DA(F51) DG(G69):DC(F50) DT(G70):DA(F49) DA(G71):DT(F48) DT(G72):DA(F47) DT(G73):DA(F46) DG(G74):DC(F45) DT(G75):DA(F44) DT(G76):DA(F43) DT(G77):DA(F42) DA(G78):DT(F41) DT(G79):DA(F40) DT(G80):DA(F39) DT(G81):DA(F38) DT(G82):DA(F37) DC(G83):DG(F36) DC(G84):DG(F35) DC(G85):DG(F34) DT(G86):DA(F33) DT(G87):DA(F32) DT(G88):DA(F31) DA(G89):DT(F30) DA(G90):DT(F29) DT(G91):DA(F28) DT(G92):DA(F27) DT(G93):DA(F26) DT(G94):DA(F25) DA(G95):DT(F24) DG(G96):DC(F23) DG(G97):DC(F22) DA(G98):DT(F21) DT(G99):DA(F20) DA(G100):DT(F19) DT(G101):DA(F18) DG(G102):DC(F17) DA(G103):DT(F16) DA(G104):DT(F15) DA(G105):DT(F14) DA(G106):DT(F13) DC(G107):DG(F12) DA(G108):DT(F11) DA(G109):DT(F10) DG(G110):DC(F9) DA(G111):DT(F8) DA(G112):DT(F7) DT(G113):DA(F6) chainH ( 22) ARG277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) SER279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ARG304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) LEU308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) THR333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) SER334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLU336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 16 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) TYR343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) GLU362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) SER364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) LYS365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) TYR392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 17 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) ARG396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) GLN418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) THR421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) MET424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) LYS449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) SER450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) ASP451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ARG457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) LYS490 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) CYS504 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) GLN506 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) ARG508 0 0 0 0 0 0 0 0 0 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) HIS509 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) MET512 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) THR516 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG533 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) GLN534 0 0 0 0 4 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) LYS535 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) LEU537 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) ARG566 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vsvydfeeetfqcelcsytcpRrSnldRhmkshtderphkchlcgrafRtvtLlrnhlnthtgtrphkcpdcdmafvTSgElvRhrrYkhthekpfkcsmcdyasvEvSKlkRhirshtgerpfqcslcsyasrdtYKlkRhmrthsgekpyecyicharftQsgTmkMhilqkhtenvakfhcphcdtviaRKSDlgVhlRkqhsyieqgkkcrycdavfheryaliqhqkshKnekrfkcdqcdyaCrQeRHmiMhkrThtgekpyacshcdktfRQKqLldmhfkryhdpnfvpaafvcskcgktftRrntmarhadnc >7w1y_5:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MCM DOUBLE HEXAMER BOUND TO NATURAL DNA DUPLEX (POLYAT/POLYTA) organism=? DNA sequence DA(O1):DT(S-1) DA(O2):DT(S-2) DA(O3):DT(S-3) DA(O4):DT(S-4) DA(O5):DT(S-5) DA(O6):DT(S-6) DA(O7):DT(S-7) DA(O8):DT(S-8) DA(O9):DT(S-9) DA(O10):DT(S-10) DA(O11):DT(S-11) DA(O12):DT(S-12) DA(O13):DT(S-13) DA(O14):DT(S-14) DA(O15):DT(S-15) DA(O16):DT(S-16) DA(O17):DT(S-17) DA(O18):DT(S-18) DA(O19):DT(S-19) DA(O20):DT(S-20) DA(O21):DT(S-21) DA(O22):DT(S-22) DA(O23):DT(S-23) DA(O24):DT(S-24) DA(O25):DT(S-25) DA(O26):DT(S-26) DA(O27):DT(S-27) DA(O28):DT(S-28) DA(O29):DT(S-29) DA(O30):DT(S-30) DA(O31):DT(S-31) DA(O32):DT(S-32) DA(O33):DT(S-33) DA(O34):DT(S-34) DA(O35):DT(S-35) DA(O36):DT(S-36) DA(O37):DT(S-37) DA(O38):DT(S-38) DA(O39):DT(S-39) DA(O40):DT(S-40) DA(O41):DT(S-41) DA(O42):DT(S-42) DA(O43):DT(S-43) DA(O44):DT(S-44) DA(O45):DT(S-45) DA(O46):DT(S-46) DA(O47):DT(S-47) DA(O48):DT(S-48) DA(O49):DT(S-49) chain5 (188) ARG195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 62 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) LEU209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ASP210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) THR277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) SER279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgfddpgifysdsfgggqarksqlqrrfkeflrqyrvgtdrtgftfkyrdelkrhynlgeywievemedlasfdedladylykqpaehlqlleeaakevadevtrprpsgeevlqdiqvmlksdaspssirslksdmmshlvkipgiiiaasavrakatrisiqcrscrntltniamrpglegyalpRkcntdqagrpkcpLDpyfimpdkckcvdfqtlklqelpdavphgemprhmqlycdrylcdkvvpgnrvtimgiysikkfglTtSrgrdrvgvgirssyirvlgiqvdtagavspqeeeefrrlaalpnvyevisksiapsifggtdmkkaiacllfggsrkrlpdgltrrgdinllmlgdpgtaksqllkfvekcspigvytsgkgssaagltasvmrdpssrnfimeggamvladggvvcidefdkmreddrvaiheameqqtisiakagitttlnsrcsvlaaansvfgrwdetkgednidfmptilsrfdmifivkdehneerdvmlakhvitlhvsalvegeidlaklkkfiaycrvkcgprlsaeaaeklknryiimrsgarqherdsdrrssipitvrqleaivriaealskmklqpfateadveealrlfqvstldaalsgtlsgvegftsqedqemlsriekqlkrrfaigsqvsehsiikdfpehaihkvlqlmlrrgeiqhrmqrkvlyrlk >7w1y_7:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MCM DOUBLE HEXAMER BOUND TO NATURAL DNA DUPLEX (POLYAT/POLYTA) organism=? DNA sequence DA(O1):DT(S-1) DA(O2):DT(S-2) DA(O3):DT(S-3) DA(O4):DT(S-4) DA(O5):DT(S-5) DA(O6):DT(S-6) DA(O7):DT(S-7) DA(O8):DT(S-8) DA(O9):DT(S-9) DA(O10):DT(S-10) DA(O11):DT(S-11) DA(O12):DT(S-12) DA(O13):DT(S-13) DA(O14):DT(S-14) DA(O15):DT(S-15) DA(O16):DT(S-16) DA(O17):DT(S-17) DA(O18):DT(S-18) DA(O19):DT(S-19) DA(O20):DT(S-20) DA(O21):DT(S-21) DA(O22):DT(S-22) DA(O23):DT(S-23) DA(O24):DT(S-24) DA(O25):DT(S-25) DA(O26):DT(S-26) DA(O27):DT(S-27) DA(O28):DT(S-28) DA(O29):DT(S-29) DA(O30):DT(S-30) DA(O31):DT(S-31) DA(O32):DT(S-32) DA(O33):DT(S-33) DA(O34):DT(S-34) DA(O35):DT(S-35) DA(O36):DT(S-36) DA(O37):DT(S-37) DA(O38):DT(S-38) DA(O39):DT(S-39) DA(O40):DT(S-40) DA(O41):DT(S-41) DA(O42):DT(S-42) DA(O43):DT(S-43) DA(O44):DT(S-44) DA(O45):DT(S-45) DA(O46):DT(S-46) DA(O47):DT(S-47) DA(O48):DT(S-48) DA(O49):DT(S-49) chain7 (284) ARG286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lkdyalekekvkkflqefyqddelgkkqfkygnqlvrlahreqvalyvdlddvaeddpelvdsicenarryaklfadavqellpqykerevvnkdvldvyiehrlmmeqrsrdpgmvrspqnqypaelmrrfelyfqgpssnkprvirevradsvgklvtvrgivtrvsevkpkmvvatytcdqcgaetyqpiqsptfmplimcpsqecqtnrsggrlylqtrgsrfikfqemkmqehsdqvpvgniprsitvlvegentriaqpgdhvsvtgiflpilrtgfRqvvqgllsetyleahrivkmnksedltreelrqiaeedfyeklaasiapeiyghedvkkalllllvggvdqsprgmkirgniniclmgdpgvaksqllsyidrlaprsqyttgrgssgvgltaavlrdsvsgeltleggalvladqgvccidefdkmaeadrtaihevmeqqtisiakagilttlnarcsilaaanpaygrynprrsleqniqlpaallsrfdllwliqdrpdrdndlrlaqhityvhqhsrqppsqfepldmklmrryiamcrekqpmvpesladyitaayvemrreawaskdatytsartllailrlstalarlrmvdvvekedvneairlmemskdsll >7w1y_E:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MCM DOUBLE HEXAMER BOUND TO NATURAL DNA DUPLEX (POLYAT/POLYTA) organism=? DNA sequence DT(S-49):DA(O49) DT(S-48):DA(O48) DT(S-47):DA(O47) DT(S-46):DA(O46) DT(S-45):DA(O45) DT(S-44):DA(O44) DT(S-43):DA(O43) DT(S-42):DA(O42) DT(S-41):DA(O41) DT(S-40):DA(O40) DT(S-39):DA(O39) DT(S-38):DA(O38) DT(S-37):DA(O37) DT(S-36):DA(O36) DT(S-35):DA(O35) DT(S-34):DA(O34) DT(S-33):DA(O33) DT(S-32):DA(O32) DT(S-31):DA(O31) DT(S-30):DA(O30) DT(S-29):DA(O29) DT(S-28):DA(O28) DT(S-27):DA(O27) DT(S-26):DA(O26) DT(S-25):DA(O25) DT(S-24):DA(O24) DT(S-23):DA(O23) DT(S-22):DA(O22) DT(S-21):DA(O21) DT(S-20):DA(O20) DT(S-19):DA(O19) DT(S-18):DA(O18) DT(S-17):DA(O17) DT(S-16):DA(O16) DT(S-15):DA(O15) DT(S-14):DA(O14) DT(S-13):DA(O13) DT(S-12):DA(O12) DT(S-11):DA(O11) DT(S-10):DA(O10) DT(S-9):DA(O9) DT(S-8):DA(O8) DT(S-7):DA(O7) DT(S-6):DA(O6) DT(S-5):DA(O5) DT(S-4):DA(O4) DT(S-3):DA(O3) DT(S-2):DA(O2) DT(S-1):DA(O1) chainE (450) ARG468 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence levrdevaekcqklfldfleefqssdgeikylqlaeelirperntlvvsfvdleqfnqqlsttiqeefyrvypylcralktfvkdrkeiplakdfyvafqdlptrhkireltssriglltrisgqvvrthpvhpelvsgtflcldcqtvirdveqqfkytqpnicrnpvcanrrrflldtnksrfvdfqkvriqetqaelprgsiprslevilraeavesaqagdkcdftgtlivvpdvsklstpgaraetnsrvsgvdgyetegirglralgvrdlsyrlvflaccvaptnprfggkeeeqtaesiknqmtvkewekvfemsqdknlyhnlctslfptihgndevkrgvllmlfggvpkttgegtslrgdinvcivgdpstaksqflkhveefspravytsgkassaagltaavvrdeeshefvieagalmladngvccidefdkmdvRdqvaiheameqqtisitkagvkatlnartsilaaanpisghydrskslkqninlsapimsrfdlffilvdecnevtdyaiarrivdlhsrieesidrvyslddirryllfarqfkpkiskesedfiveqykhlrqrdgsgvtksswritvrqlesmirlseamarmhccdevqpkhvkeafrllnksiirvetpeycrisnlivlhlrkveeekrselvnwylkeieseidseeelinkkriiekvihrlthydhvlielt >7w27_C: title=CRYSTAL STRUCTURE OF BEND3-BEN4-DNA COMPLEX organism=Homo sapiens DNA sequence DG(A716):DC(B13) DA(A717):DT(B12) DC(A718):DG(B11) DC(A719):DG(B10) DC(A720):DG(B9) DA(A721):DT(B8) DC(A722):DG(B7) DG(A723):DC(B6) DC(A724):DG(B5) DA(A725):DT(B4) DG(A726):DC(B3) DC(A727):DG(B2) chainC ( 93) GLU807 0 0 0 1 11 2 0 0 0 0 0 0 ( 96) ARG810 0 0 0 0 0 1 15 13 0 0 0 0 ( 97) ARG811 0 0 0 7 0 0 0 0 0 0 0 0 ( 98) PRO812 0 0 0 0 0 2 0 0 0 0 0 0 (101) LYS815 0 0 8 10 6 0 0 0 0 0 0 0 prot.sequence vpspyllsdkevreivqqslsvgnfaarllvrlfpelftaenlrlqynhsgacnkkqldptrlrlirhyveavypvekmeevwhyecipsidErcRRPnrKkcdilkkakk >7w5p_A: title=CRYSTAL STRUCTURE OF THE DIOXYGENASE CCTET FROM COPRINOPSIS CINEREAIN BOUND TO 12BP N6-METHYLDEOXYADENINE (6MA) CONTAINING DUPLEX DNA organism=COPRINOPSIS CINEREA DNA sequence DC(C1):DG(B12) DG(C2):DC(B11) DT(C3):DA(B10) DA(C4):DT(B9) DG(C5):DC(B8) DC(C6):DG(B7) DG(C7):6MA(B6) DG(C8):DC(B5) DA(C9):DT(B4) DT(C10):DA(B3) DC(C11):DG(B2) DG(C12):DC(B1) chainA ( 76) ARG92 0 0 0 0 0 0 0 0 8 6 3 0 (171) ARG205 0 0 0 0 0 0 31 0 0 0 0 0 (197) PRO231 0 0 0 0 0 6 0 0 0 0 0 0 (198) VAL232 0 0 0 0 0 24 2 7 0 0 0 0 (200) HIS234 0 0 0 0 0 22 7 0 0 0 0 0 (282) SER316 0 0 0 0 0 0 3 0 0 0 0 0 (294) ASP328 0 0 0 0 0 0 16 0 0 0 0 0 (296) SER330 0 0 0 0 0 0 1 0 0 0 0 0 (303) ASP337 0 0 0 0 0 0 5 0 0 0 0 0 (355) ALA389 0 0 0 0 0 0 2 0 0 0 0 0 (357) PHE391 0 0 0 0 0 0 42 0 0 0 0 0 (359) ARG393 0 0 0 0 0 0 7 0 0 0 0 0 prot.sequence lpslllideaaavlgrmiqglrtgipyihtendsikanpilrtalwqaayvlekayrrryrvpwtarrymreltpRqdgrnanreavmakefppgaelnsdhpvqeilpamiidaedhilfcylpscvspaimtiidaavgtlattkdghlqkksraregerarklganwrealdlfrqgackmtpgvltfapawwPVgHenqlpgpastlkppkgegrmflsdipiasalvgailaqinqplfesgvkvlrelysnskltkdhstvskiieiwfspfsslslivnratpihrdtsgpiegmdilvtggnysngvlvtpsfnrrwtynpgcvvallgklvlhgvpevdgerycmahfwrerlfdaagvpfpypskwqesyt >7w5p_AH: title=CRYSTAL STRUCTURE OF THE DIOXYGENASE CCTET FROM COPRINOPSIS CINEREAIN BOUND TO 12BP N6-METHYLDEOXYADENINE (6MA) CONTAINING DUPLEX DNA organism=COPRINOPSIS CINEREA DNA sequence DC(C1):DG(B12) DG(C2):DC(B11) DT(C3):DA(B10) DA(C4):DT(B9) DG(C5):DC(B8) DC(C6):DG(B7) DG(C7):6MA(B6) DG(C8):DC(B5) DA(C9):DT(B4) DT(C10):DA(B3) DC(C11):DG(B2) DG(C12):DC(B1) chainA ( 76) ARG92 0 0 0 0 0 0 0 0 8 6 3 0 (171) ARG205 0 0 0 0 0 0 31 0 0 0 0 0 (197) PRO231 0 0 0 0 0 6 0 0 0 0 0 0 (198) VAL232 0 0 0 0 0 24 2 7 0 0 0 0 (200) HIS234 0 0 0 0 0 22 7 0 0 0 0 0 (282) SER316 0 0 0 0 0 0 3 0 0 0 0 0 (294) ASP328 0 0 0 0 0 0 16 0 0 0 0 0 (296) SER330 0 0 0 0 0 0 1 0 0 0 0 0 (303) ASP337 0 0 0 0 0 0 5 0 0 0 0 0 (355) ALA389 0 0 0 0 0 0 2 0 0 0 0 0 (357) PHE391 0 0 0 0 0 0 42 0 0 0 0 0 (359) ARG393 0 0 0 0 0 0 7 0 0 0 0 0 chainH ( 2) PRO18 0 0 0 0 0 0 0 0 0 0 0 4 ( 6) LEU22 0 0 0 0 0 0 0 0 0 0 0 12 ( 34) SER50 0 0 0 0 0 0 0 0 0 0 0 1 ( 38) ASN54 0 0 0 0 0 0 0 0 0 0 0 5 (217) PRO260 0 0 0 0 0 0 0 0 0 0 0 6 (218) ILE261 0 0 0 0 0 0 0 0 0 0 0 6 (266) PHE309 0 0 0 0 0 0 0 0 0 0 0 9 prot.sequence lpslllideaaavlgrmiqglrtgipyihtendsikanpilrtalwqaayvlekayrrryrvpwtarrymreltpRqdgrnanreavmakefppgaelnsdhpvqeilpamiidaedhilfcylpscvspaimtiidaavgtlattkdghlqkksraregerarklganwrealdlfrqgackmtpgvltfapawwPVgHenqlpgpastlkppkgegrmflsdipiasalvgailaqinqplfesgvkvlrelysnskltkdhstvskiieiwfspfsslslivnratpihrdtsgpiegmdilvtggnysngvlvtpsfnrrwtynpgcvvallgklvlhgvpevdgerycmahfwrerlfdaagvpfpypskwqesyt/lPsllLideaaavlgrmiqglrtgipyihtendSikaNpilrtalwqaayvlekayrrryrvpwtarrymreltprqdgrnanreavmakefppgaelnvqeilpamiidaedhilfcylpscvspaimtiidaavgtlattkdghlqkksraregeganwrealdlfrqgackmtpgvltfapawwpvghenqlpgpastlkppkgegrmflsdiPIasalvgailaqinqplfesgvkvlrelysnskltkdhstvskiieiwFspfsslslivnratpihrdtsgpiegmdilvtggnysngvlvtpsfnrrwtynpgcvvallgklvlhgvpevdgerycmahfwrerlfdaagvpfpypskwqesyt >7w5p_DG: title=CRYSTAL STRUCTURE OF THE DIOXYGENASE CCTET FROM COPRINOPSIS CINEREAIN BOUND TO 12BP N6-METHYLDEOXYADENINE (6MA) CONTAINING DUPLEX DNA organism=COPRINOPSIS CINEREA DNA sequence DC(F1):DG(E12) DG(F2):DC(E11) DT(F3):DA(E10) DA(F4):DT(E9) DG(F5):DC(E8) DC(F6):DG(E7) DG(F7):6MA(E6) DG(F8):DC(E5) DA(F9):DT(E4) DT(F10):DA(E3) DC(F11):DG(E2) DG(F12):DC(E1) chainD (169) ARG205 0 0 0 0 0 0 27 0 0 0 0 0 (195) PRO231 0 0 0 0 0 6 0 0 0 0 0 0 (196) VAL232 0 0 0 0 0 20 2 7 0 0 0 0 (198) HIS234 0 0 0 0 0 22 5 0 0 0 0 0 (280) SER316 0 0 0 0 0 0 1 0 0 0 0 0 (292) ASP328 0 0 0 0 0 0 16 0 0 0 0 0 (294) SER330 0 0 0 0 0 0 2 0 0 0 0 0 (301) ASP337 0 0 0 0 0 0 5 0 0 0 0 0 (353) ALA389 0 0 0 0 0 0 2 0 0 0 0 0 (355) PHE391 0 0 0 0 0 0 41 0 0 0 0 0 (357) ARG393 0 0 0 0 0 0 4 0 0 0 0 0 chainG ( 2) PRO18 0 0 0 0 0 0 0 0 0 0 0 4 ( 6) LEU22 0 0 0 0 0 0 0 0 0 0 0 14 ( 34) SER50 0 0 0 0 0 0 0 0 0 0 0 1 ( 38) ASN54 0 0 0 0 0 0 0 0 0 0 0 5 (223) PRO260 0 0 0 0 0 0 0 0 0 0 0 6 (224) ILE261 0 0 0 0 0 0 0 0 0 0 0 8 (272) PHE309 0 0 0 0 0 0 0 0 0 0 0 9 prot.sequence lpslllideaaavlgrmiqglrtgipyihtendsikanpilrtalwqaayvlekayrrryrvpwtarrymreltprqdgrnanreavmakefppgaelnsdhpvqeilpamiidaedhilfcylpscvspaimtiidaavgtlattkdghlqkksraregeralganwrealdlfrqgackmtpgvltfapawwPVgHenqlpgpastlkppkgegrmflsdipiasalvgailaqinqplfesgvkvlrelysnskltkdhstvskiieiwfspfsslslivnratpihrdtsgpiegmdilvtggnysngvlvtpsfnrrwtynpgcvvallgklvlhgvpevdgerycmahfwrerlfdaagvpfpypskwqes/lPsllLideaaavlgrmiqglrtgipyihtendSikaNpilrtalwqaayvlekayrrryrvpwtarrymreltprqdgrnanreavmakefppgaelnsvqeilpamiidaedhilfcylpscvspaimtiidaavgtlattkdghlqkksraregerarveganwrealdlfrqgackmtpgvltfapawwpvghenqlpgpastlkppkgegrmflsdiPIasalvgailaqinqplfesgvkvlrelysnskltkdhstvskiieiwFspfsslslivnratpihrdtsgpiegmdilvtggnysngvlvtpsfnrrwtynpgcvvallgklvlhgvpevdgerycmahfwrerlfdaagvpfpypskwqesyt >7w5w_CDFJ: title=CRYO-EM STRUCTURE OF SOXS-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX WITH MICF PROMOTER DNA organism=? DNA sequence DT(22):DA(189) DG(23):DC(188) DC(24):DG(187) DA(25):DT(186) DT(26):DA(185) DC(27):DG(184) DC(28):DG(183) DG(29):DC(182) DT(210):DA(181) DG(211):DC(180) DA(212):DT(179) DG(213):DG(178) DT(214):DT(177) DC(215):DC(176) DG(216):DG(175) DA(217):DA(174) DG(218):DG(173) DG(219):DG(172) DG(220):DG(171) DT(221):DT(170) DA(222):DA(169) DA(223):DA(168) DT(224):DT(167) DA(225):DA(166) DA(226):DT(165) DG(227):DC(164) DT(228):DA(163) DT(229):DA(162) DG(230):DC(161) DC(231):DG(160) DG(232):DC(159) DA(233):DT(158) DG(234):DC(157) DT(235):DA(156) DG(236):DC(155) DA(237):DT(154) DA(238):DT(153) DG(239):DC(152) DG(240):DC(151) DT(241):DA(150) DT(242):DA(149) DT(243):DA(148) DT(244):DA(147) DG(245):DC(146) DT(246):DA(145) DT(247):DA(144) DT(248):DA(143) DT(249):DA(142) DG(250):DC(141) DA(251):DT(140) DC(252):DG(139) DA(253):DT(138) DT(254):DA(137) DT(255):DA(136) DC(256):DG(135) DA(257):DT(134) DG(258):DC(133) DT(259):DA(132) DG(260):DC(131) DC(261):DG(130) DT(262):DA(129) DG(263):DC(128) DT(264):DA(127) chainC (173) ARG175 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 7 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) TYR367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (508) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (536) ARG542 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (298) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (774) THR790 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) ALA791 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 4) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (252) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 36) TRP36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 19 17 22 0 0 ( 37) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 ( 39) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 8 0 0 0 0 0 ( 40) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 11 0 0 ( 85) GLN85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 15 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 2 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiYrmmgetreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqFmvqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkssrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgSnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/rttDpVRmyMremgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkYtNRglqfldliqegniglmkavdkfEyrRgykfSTYaTWWirQaiTrsIadqartiripvhmiEtiNklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepIsmetpIgDdeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdtrerirqieakalrklrhpsrsevlrsfldd/mshqkiiqdliawidehidqplnidvvakksgyskWYlQRmfrtvthqtlgdyirqrrlllaavelrtterpifdiamdlgyvsQQTfsRvfrrqfdrtpsdyrhrl >7w5w_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF SOXS-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX WITH MICF PROMOTER DNA organism=? DNA sequence DA(127):DT(264) DC(128):DG(263) DA(129):DT(262) DG(130):DC(261) DC(131):DG(260) DA(132):DT(259) DC(133):DG(258) DT(134):DA(257) DG(135):DC(256) DA(136):DT(255) DA(137):DT(254) DT(138):DA(253) DG(139):DC(252) DT(140):DA(251) DC(141):DG(250) DA(142):DT(249) DA(143):DT(248) DA(144):DT(247) DA(145):DT(246) DC(146):DG(245) DA(147):DT(244) DA(148):DT(243) DA(149):DT(242) DA(150):DT(241) DC(151):DG(240) DC(152):DG(239) DT(153):DA(238) DT(154):DA(237) DC(155):DG(236) DA(156):DT(235) DC(157):DG(234) DT(158):DA(233) DC(159):DG(232) DG(160):DC(231) DC(161):DG(230) DA(162):DT(229) DA(163):DT(228) DC(164):DG(227) DT(165):DA(226) DA(166):DA(225) DT(167):DT(224) DA(168):DA(223) DA(169):DA(222) DT(170):DT(221) DG(171):DG(220) DG(172):DG(219) DG(173):DG(218) DA(174):DA(217) DG(175):DG(216) DC(176):DC(215) DT(177):DT(214) DG(178):DG(213) DT(179):DA(212) DC(180):DG(211) DA(181):DT(210) DC(182):DG(29) DG(183):DC(28) DG(184):DC(27) DA(185):DT(26) DT(186):DA(25) DG(187):DC(24) DC(188):DG(23) DA(189):DT(22) chainF ( 4) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (252) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rttDpVRmyMremgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkYtNRglqfldliqegniglmkavdkfEyrRgykfSTYaTWWirQaiTrsIadqartiripvhmiEtiNklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepIsmetpIgDdeDshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdtrerirqieakalrklrhpsrsevlrsfldd >7w5x_ACDFK:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF SOXS-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX WITH ZWF PROMOTER DNA organism=? DNA sequence DA(113):DT(276) DT(114):DA(275) DC(115):DG(274) DG(116):DC(273) DC(117):DG(272) DA(118):DT(271) DC(119):DG(270) DG(120):DC(269) DG(121):DC(268) DG(122):DC(267) DT(123):DA(266) DG(124):DC(265) DG(125):DC(264) DA(126):DT(263) DT(127):DA(262) DA(128):DT(261) DA(129):DT(260) DG(130):DC(259) DC(131):DG(258) DG(132):DC(257) DT(133):DA(256) DT(134):DA(255) DT(135):DA(254) DA(136):DT(253) DC(137):DG(252) DA(138):DT(251) DG(139):DC(250) DT(140):DA(249) DT(141):DA(248) DT(142):DA(247) DT(143):DA(246) DC(144):DG(245) DG(145):DC(244) DC(146):DG(243) DA(147):DT(242) DA(148):DT(241) DG(149):DC(240) DC(150):DG(239) DT(151):DA(238) DC(152):DG(237) DG(153):DC(236) DT(154):DA(235) DA(155):DT(234) DA(156):DT(233) DA(157):DT(232) DA(158):DT(231) DG(159):DC(230) DC(160):DG(229) DA(161):DT(228) DG(162):DC(227) DT(163):DA(226) DA(164):DA(225) DT(165):DT(224) DA(166):DA(223) DA(167):DA(222) DT(168):DT(221) DG(169):DG(220) DG(170):DG(219) DG(171):DG(218) DA(172):DA(217) DG(173):DG(216) DC(174):DC(215) DT(175):DT(214) DG(176):DG(213) DT(177):DA(212) DC(178):DG(211) DA(179):DT(210) DC(180):DG(29) DG(181):DC(28) DG(182):DC(27) DA(183):DT(26) DT(184):DA(25) DG(185):DC(24) DC(186):DG(23) DA(187):DT(22) chainC (149) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (173) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 9 0 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 21 0 0 0 0 0 0 0 0 0 0 (365) TYR367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 chainD (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (774) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 (775) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainF ( 18) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) TYR394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) LEU573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (466) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 36) TRP36 0 0 9 28 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) TYR37 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG40 0 0 7 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 17 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) THR87 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 90) ARG90 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA prot.sequence teflkprlvdieqvssthakvtleplergfghtlgnalrrillssmpgcavteveidgvlheystkegvqedileillnlkglavrvqgkdeviltlnksgigpvtaadithdgdveivkpqhvichltdenasismrikvqrgrgyvpastrihseederpigrllvdacyspveriaynveaarveqrtdldklviemetngtidpeeairraatilaeqleafvdlrdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnslteikdvlasrglslgmrlenwppa/ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiYrmmRpgEpptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveRavkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmvqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgSNkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgspyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttDpVRmyMreMgtveLltregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkYtRglqfldliqegniglmkavdkFEyrRgYkfSTYaTWWirQaiTrsIadqartiripvHmiEtiNklNrisrqmlqemgreptpeelaermlmpedkirkvlkiakepIsmeTpIgDdedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytLeevgkqfdvTrERiRqieakalrklrpsrsevlrsfldd/mshqkiiqdliawidehidqplnidvvakksgyskWYlqRmfrtvthqtlgdyirqrrlllaavelrtterpifdiamdlgyvsQQTfsRvfrrqfdrtpsdyrhrl >7w5y_A:Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=CRYO-EM STRUCTURE OF SOXS-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX WITH FPR PROMOTER DNA organism=? DNA sequence DG(23):DC(186) DC(24):DG(185) DA(25):DT(184) DT(26):DA(183) DC(27):DG(182) DC(28):DC(180) DT(210):DA(179) DG(211):DC(178) DA(212):DT(177) DG(213):DG(176) DT(214):DT(175) DC(215):DC(174) DG(216):DG(173) DA(217):DA(172) DG(218):DG(171) DG(219):DG(170) DG(220):DG(169) DT(221):DT(168) DA(222):DA(167) DA(223):DA(166) DT(224):DT(165) DA(225):DA(164) DA(226):DT(163) DG(227):DC(162) DT(228):DA(161) DT(229):DA(160) DC(230):DG(159) DT(231):DA(158) DC(232):DG(157) DC(233):DG(156) DG(234):DC(155) DA(235):DT(154) DA(236):DT(153) DC(237):DG(152) DA(238):DT(151) DA(239):DT(150) DA(240):DT(149) DA(241):DT(148) DA(242):DT(147) DA(243):DT(146) DA(244):DT(145) DT(245):DA(144) DT(246):DA(143) DC(247):DG(142) DC(248):DG(141) DA(249):DT(140) DG(250):DC(139) DT(251):DA(138) DC(252):DG(136) DC(253):DG(135) DG(255):DC(134) DA(256):DT(132) DG(258):DC(131) DG(259):DC(130) DA(260):DT(129) DC(261):DG(128) DT(262):DA(127) DG(263):DC(126) DG(264):DC(125) DA(265):DT(124) DA(266):DT(123) DG(267):DC(122) DG(268):DC(121) DC(269):DG(120) DT(270):DA(119) DC(271):DG(118) DA(272):DT(117) DA(273):DT(116) DC(275):DG(114) DG(276):DT(112) DT(278):DA(111) DC(279):DG(110) DA(281):DT(19) DA(282):DT(18) DT(283):DT(17) DC(284):DG(15) chainA (246) ARG594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) ASN623 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence teflkprlvdieqvssthakvtleplergfghtlgnalrrillssmpgcavteveidgvlheystkegvqedileillnlkglavrvqgkdeviltlnksgigpvtaadithdgdveivkpqhvichltdenasismrikvqrgrgyvpastrihseederpigrllvdacyspveriaynveaarveqrtdldklviemetngtidpeeairraatilaeqleafvdlrdpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpNlteikdvlasrglslgmrlenwppa >7w5y_ACDFK:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Translation_proteins_SH3-like_domain;Nucleic_acid-binding_proteins;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF SOXS-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX WITH FPR PROMOTER DNA organism=? DNA sequence DG(23):DC(186) DC(24):DG(185) DA(25):DT(184) DT(26):DA(183) DC(27):DG(182) DC(28):DC(180) DT(210):DA(179) DG(211):DC(178) DA(212):DT(177) DG(213):DG(176) DT(214):DT(175) DC(215):DC(174) DG(216):DG(173) DA(217):DA(172) DG(218):DG(171) DG(219):DG(170) DG(220):DG(169) DT(221):DT(168) DA(222):DA(167) DA(223):DA(166) DT(224):DT(165) DA(225):DA(164) DA(226):DT(163) DG(227):DC(162) DT(228):DA(161) DT(229):DA(160) DC(230):DG(159) DT(231):DA(158) DC(232):DG(157) DC(233):DG(156) DG(234):DC(155) DA(235):DT(154) DA(236):DT(153) DC(237):DG(152) DA(238):DT(151) DA(239):DT(150) DA(240):DT(149) DA(241):DT(148) DA(242):DT(147) DA(243):DT(146) DA(244):DT(145) DT(245):DA(144) DT(246):DA(143) DC(247):DG(142) DC(248):DG(141) DA(249):DT(140) DG(250):DC(139) DT(251):DA(138) DC(252):DG(136) DC(253):DG(135) DG(255):DC(134) DA(256):DT(132) DG(258):DC(131) DG(259):DC(130) DA(260):DT(129) DC(261):DG(128) DT(262):DA(127) DG(263):DC(126) DG(264):DC(125) DA(265):DT(124) DA(266):DT(123) DG(267):DC(122) DG(268):DC(121) DC(269):DG(120) DT(270):DA(119) DC(271):DG(118) DA(272):DT(117) DA(273):DT(116) DC(275):DG(114) DG(276):DT(112) DT(278):DA(111) DC(279):DG(110) DA(281):DT(19) DA(282):DT(18) DT(283):DT(17) DC(284):DG(15) chainA (246) ARG594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) ASN623 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (173) ARG175 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 8 72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ASP185 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 12 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 28 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) TYR367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 2 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (467) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (538) GLU541 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) ARG542 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (303) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ARG322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (774) THR790 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) ALA791 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) ILE443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) LYS502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) GLU503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (405) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) GLU574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (466) THR583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) GLU585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 18 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 34) SER34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) TRP36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 16 17 0 0 0 0 0 0 0 0 0 ( 37) TYR37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 40) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 86) GLN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 ( 87) THR87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 ( 90) ARG90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 3 3 0 0 prot.sequence teflkprlvdieqvssthakvtleplergfghtlgnalrrillssmpgcavteveidgvlheystkegvqedileillnlkglavrvqgkdeviltlnksgigpvtaadithdgdveivkpqhvichltdenasismrikvqrgrgyvpastrihseederpigrllvdacyspveriaynveaarveqrtdldklviemetngtidpeeairraatilaeqleafvdlrdpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpNlteikdvlasrglslgmrlenwppa/ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynaRiipyrgsWlDfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiYrmmRpgEpptreaaeslfenlffsedrydlavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveravkerlslgdldtlmpqdminakpisaavkEffgssqlsqfmvqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelglteekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkssrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgSNkRplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttdpvRmyMremgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNrglqfldliqegniglmkavdkFEyrRgYkfSTYaTWWirQaitrsIadqartiripvHmiEtiNklNrisrqmlqemgreptpeelaermlmpedkirkvlkiaKEpsmetpIgDdeDshlgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytlEevgkqfdvTrERiRqieakalrklrhpsrsevlrsfldd/mshqkiiqdliawidehidqplnidvvakksgySkWYlQRmfrtvthqtlgdyirqrrlllaavelrtterpifdiamdlgyvsQQTfsRvfrrqfdrtpsdyrhrl >7w7l_A:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF NF-KB P52 HOMODIMER BOUND TO 13-MER A/T-CENTRIC P- SELECTIN KB DNA FRAGMENT organism=Homo sapiens DNA sequence DG(C1):DC(D13) DG(C2):DC(D12) DG(C3):DC(D11) DG(C4):DC(D10) DG(C5):DC(D9) DT(C6):DA(D8) DA(C7):DT(D7) DA(C8):DT(D6) DC(C9):DG(D5) DC(C10):DG(D4) DC(C11):DG(D3) DC(C12):DG(D2) DT(C13):DA(D1) chainA ( 20) ARG52 0 0 0 0 0 0 0 0 4 11 5 0 0 ( 22) ARG54 0 0 0 0 0 0 0 0 0 1 13 3 0 ( 23) TYR55 0 0 0 0 0 0 0 6 1 0 0 0 0 ( 26) GLU58 0 0 0 0 0 0 0 0 9 4 0 0 0 ( 30) HIS62 0 0 0 0 0 0 0 0 0 0 6 13 2 (189) LYS221 0 0 0 0 0 0 0 0 6 1 0 0 0 prot.sequence etadgpylviveqpkqrgfRfRYgcEgpsHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrasdgsfslplkpvisqpihdsKspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyy >7w7l_AB:p53-like_transcription_factors;E_set_domains; title=STRUCTURE OF NF-KB P52 HOMODIMER BOUND TO 13-MER A/T-CENTRIC P- SELECTIN KB DNA FRAGMENT organism=Homo sapiens DNA sequence DG(C1):DC(D13) DG(C2):DC(D12) DG(C3):DC(D11) DG(C4):DC(D10) DG(C5):DC(D9) DT(C6):DA(D8) DA(C7):DT(D7) DA(C8):DT(D6) DC(C9):DG(D5) DC(C10):DG(D4) DC(C11):DG(D3) DC(C12):DG(D2) DT(C13):DA(D1) chainA ( 20) ARG52 0 0 0 0 0 0 0 0 4 11 5 0 0 ( 22) ARG54 0 0 0 0 0 0 0 0 0 1 13 3 0 ( 23) TYR55 0 0 0 0 0 0 0 6 1 0 0 0 0 ( 26) GLU58 0 0 0 0 0 0 0 0 9 4 0 0 0 ( 30) HIS62 0 0 0 0 0 0 0 0 0 0 6 13 2 (189) LYS221 0 0 0 0 0 0 0 0 6 1 0 0 0 chainB ( 19) ARG52 0 0 5 10 4 0 0 0 0 0 0 0 0 ( 21) ARG54 0 4 13 1 0 0 0 0 0 0 0 0 0 ( 22) TYR55 0 0 0 0 1 6 0 0 0 0 0 0 0 ( 25) GLU58 0 0 1 8 9 0 0 0 0 0 0 0 0 ( 29) HIS62 1 14 6 0 0 0 0 0 0 0 0 0 0 (188) LYS221 0 0 0 1 5 0 0 0 0 0 0 0 0 prot.sequence etadgpylviveqpkqrgfRfRYgcEgpsHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrasdgsfslplkpvisqpihdsKspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyy/tadgpylviveqpkqrgfRfRYgcEgpsHgglpgassekgrktyptvkicnyegpakievdlvthsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqrqrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrasdgsfslplkpvisqpihdsKspgasnlkisrmdktagsvrggdevyllcdkvqkddievrfyeddengwqafgdfsptdvhkqyaivfrtppyhkmkierpvtvflqlkrkrggdvsdskqftyyp >7w9v_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF NUCLEOSOME IN COMPLEX WITH P300 ACETYLTRANSFERASE CATALYTIC CORE (COMPLEX I) organism=? DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/kvLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trSsraglqfpvgrvhrllrkgnyservgagapvylaavleyltaEilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/nIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/aKtrssraglqfpvgrvhrllrkgnyservgagapvylaavleyLtaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7w9v_H:Histone-fold; title=CRYO-EM STRUCTURE OF NUCLEOSOME IN COMPLEX WITH P300 ACETYLTRANSFERASE CATALYTIC CORE (COMPLEX I) organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7way_A: title=PLMCASX-SGRNAV1-DSDNA TERNARY COMPLEX AT NTS LOADING STATE organism=PLANCTOMYCETES BACTERIUM DNA sequence DT(B21):DA(C10) DG(B22):DC(C9) DA(B23):DT(C8) DA(B24):DT(C7) DA(B25):DT(C6) DT(B26):DA(C5) DC(B27):DG(C4) DC(B28):DG(C3) DC(B29):DG(C2) DG(B30):DC(C1) chainA (174) ARG192 31 0 0 0 0 0 0 0 0 0 (179) TYR197 0 0 5 5 0 0 0 0 0 0 (209) LYS227 3 9 7 0 0 0 0 0 0 0 (213) ASP231 3 0 0 0 0 0 0 0 0 0 (494) GLN512 0 7 11 3 0 0 0 0 0 0 (495) TYR513 3 9 0 0 0 0 0 0 0 0 prot.sequence ikrinkirrrlvkdsntkkagktgpmktllvrvmtpdlrerlenlrkkpenipqpisntsranlnklltdytemkkailhvyweefqkdpvglmsrvaqpapknidqrklipvkssgfacsqccqplyvykleqvndkgkphtnyfgrcnvseherlillsphktyslgkfgqRaldfYsihvtresnhpvkpleqiggnscasgpvgKalsDacmgavasfltkyqdiilehqkvikknekrlanlkdiasanglafpkitlppqphtkegieaynnvvaqiviwvnlnlwqklkigrdeakplqrlkgfpsfplverqanevdwwdmvcnvkklinekkedgkvfwqnlagykrqeallpylsseedrkkgkkfaryqfgdlllhlekkhgedwgkvydeaweridkkveglskhikleeerrsedaqskaaltdwlrakasfvieglkeadkdefcrcelklqkwygdlrgkpfaieaensildisgfskQYncafiwqkdgvkklnlyliinyfkggklrfkkikpeafeanrfytvinkksgeivpmevnfnfddpnliilplafgkrqgrefiwndllsletgslklangrviektlynrrtrqdepalfvaltferrevldssnikpmnligiargenipavialtdpegcplsrfkdslgnpthilrigesykekqrtiqaakeveqrraggysrkyaskaknladdmvrntardllyyavtqdamlifanlsrgfgrqgkrtfmaerqytrmedwltaklayeglpsktylsktlaqytsktcsncgftitsadydrvleklkktatgwmttingkelkvegqityynrykrqnvvkdlsveldrlseesvnndisswtkgrsgealsllkkrfshrpvqekfvclncgfethaaeqaalniarswlflrsqeykkyqtnkttgntdkrafvetwqsfyrkklkevwkpav >7waz_A: title=PLMCASX-SGRNAV1-DSDNA TERNARY COMPLEX AT TS LOADING STATE organism=PLANCTOMYCETES BACTERIUM DNA sequence DC(C1):DG(B30) DG(C2):DC(B29) DG(C3):DC(B28) DG(C4):DC(B27) DA(C5):DT(B26) DT(C6):DA(B25) DT(C7):DA(B24) DT(C8):DA(B23) DC(C9):DG(B22) DA(C10):DT(B21) DT(C11):DC(C12) chainA (174) ARG192 0 0 0 0 0 0 0 0 0 4 20 (179) TYR197 0 0 0 0 0 0 0 11 8 0 0 (209) LYS227 0 0 0 0 0 0 0 0 12 20 0 (213) ASP231 0 0 0 0 0 0 0 0 0 4 0 (489) SER507 0 0 0 0 0 0 0 0 0 2 0 (494) GLN512 0 0 0 0 0 0 0 0 8 0 0 (495) TYR513 0 0 0 0 0 0 0 0 0 7 0 prot.sequence ikrinkirrrlvkdsntkkagktgpmktllvrvmtpdlrerlenlrkkpenipqpisntsranlnklltdytemkkailhvyweefqkdpvglmsrvaqpapknidqrklipvkssgfacsqccqplyvykleqvndkgkphtnyfgrcnvseherlillsphktyslgkfgqRaldfYsihvtresnhpvkpleqiggnscasgpvgKalsDacmgavasfltkyqdiilehqkvikknekrlanlkdiasanglafpkitlppqphtkegieaynnvvaqiviwvnlnlwqklkigrdeakplqrlkgfpsfplverqanevdwwdmvcnvkklinekkedgkvfwqnlagykrqeallpylsseedrkkgkkfaryqfgdlllhlekkhgedwgkvydeaweridkkveglskhikleeerrsedaqskaaltdwlrakasfvieglkeadkdefcrcelklqkwygdlrgkpfaieaensildiSgfskQYncafiwqkdgvkklnlyliinyfkggklrfkkikpeafeanrfytvinkksgeivpmevnfnfddpnliilplafgkrqgrefiwndllsletgslklangrviektlynrrtrqdepalfvaltferrevldssnikpmnligiargenipavialtdpegcplsrfhilrigesykekqrtiqaakeveqrraggysrkyaskaknladdmvrntardllyyavtqdamlifanlsrgfgrqgkrtfmaerqytrmedwltaklayeglpsktylsktlaqytsktcsncgftitsadydrvleklkktatgwmttingkelkvegqityynrykrqnvvkdlsveldrlseesvnndisswtkgrsgealsllkkrfshrpvqekfvclncgfethaaeqaalniarswlflrsqeykkyqtnkttgntdkrafvetwqsfyrkklkevwkpav >7wb0_A: title=PLMCASX-SGRNAV1-DSDNA TERNARY COMPLEX AT NTS LOADING STATE WITH FLEXIBLE H2 DOMAIN organism=PLANCTOMYCETES BACTERIUM DNA sequence DC(C1):DG(B30) DG(C2):DC(B29) DG(C3):DC(B28) DG(C4):DC(B27) DA(C5):DT(B26) DT(C6):DA(B25) DT(C7):DA(B24) DT(C8):DA(B23) DC(C9):DG(B22) DA(C10):DT(B21) chainA (174) ARG192 0 0 0 0 0 0 0 0 0 29 (179) TYR197 0 0 0 0 0 0 6 3 0 0 (209) LYS227 0 0 0 0 0 0 0 7 10 2 (213) ASP231 0 0 0 0 0 0 0 0 0 3 (332) GLN512 0 0 0 0 0 0 4 9 10 0 (333) TYR513 0 0 0 0 0 0 0 0 11 5 prot.sequence ikrinkirrrlvkdsntkkagktgpmktllvrvmtpdlrerlenlrkkpenipqpisntsranlnklltdytemkkailhvyweefqkdpvglmsrvaqpapknidqrklipvkssgfacsqccqplyvykleqvndkgkphtnyfgrcnvseherlillsphktyslgkfgqRaldfYsihvtresnhpvkpleqiggnscasgpvgKalsDacmgavasfltkyqdiilehqkvikknekrlanlkdiasanglafpkitlppqphtkegieaynnvvaqiviwvnlnlwqklkigrdeakplqrlkgfpsfplverensildisgfskQYncafiwqkdgvkklnlyliinyfkggklrfkkikpeafeanrfytvinkksgeivpmevnfnfddpnliilplafgkrqgrefiwndllsletgslklangrviektlynrrtrqdepalfvaltferrevldssnikpmnligiargenipavialtdpegcplsrfkdslgnpthilrigesykekqrtiqaakeveqrraggysrkyaskaknladdmvrntardllyyavtqdamlifanlsrgfgrqgkrtfmaerqytrmedwltaklayeglpsktylsktlqytsktcsncgftitsadydrvleklkktatgwmttingkelkvegqityynrykrqnvvkdlsveldrlseesvnndisswtkgrsgealsllkkrfshrpvqekfvclncgfethaaeqaalniarswlflrsqeykkyqtnkttgntdkrafvetwqsfyrkklkevwkpav >7wb1_A: title=PLMCASX-SGRNAV2-DSDNA TERNARY COMPLEX AT NTS LOADING STATE organism=PLANCTOMYCETES BACTERIUM DNA sequence DT(B21):DA(C10) DG(B22):DC(C9) DA(B23):DT(C8) DA(B24):DT(C7) DA(B25):DT(C6) DT(B26):DA(C5) DC(B27):DG(C4) DC(B28):DG(C3) DC(B29):DG(C2) DG(B30):DC(C1) chainA (174) ARG192 32 0 0 0 0 0 0 0 0 0 (179) TYR197 0 0 3 2 0 0 0 0 0 0 (209) LYS227 3 10 8 0 0 0 0 0 0 0 (494) GLN512 0 12 11 3 0 0 0 0 0 0 (495) TYR513 5 10 0 0 0 0 0 0 0 0 prot.sequence ikrinkirrrlvkdsntkkagktgpmktllvrvmtpdlrerlenlrkkpenipqpisntsranlnklltdytemkkailhvyweefqkdpvglmsrvaqpapknidqrklipvkssgfacsqccqplyvykleqvndkgkphtnyfgrcnvseherlillsphktyslgkfgqRaldfYsihvtresnhpvkpleqiggnscasgpvgKalsdacmgavasfltkyqdiilehqkvikknekrlanlkdiasanglafpkitlppqphtkegieaynnvvaqiviwvnlnlwqklkigrdeakplqrlkgfpsfplverqanevdwwdmvcnvkklinekkedgkvfwqnlagykrqeallpylsseedrkkgkkfaryqfgdlllhlekkhgedwgkvydeaweridkkveglskhikleeerrsedaqskaaltdwlrakasfvieglkeadkdefcrcelklqkwygdlrgkpfaieaensildisgfskQYncafiwqkdgvkklnlyliinyfkggklrfkkikpeafeanrfytvinkksgeivpmevnfnfddpnliilplafgkrqgrefiwndllsletgslklangrviektlynrrtrqdepalfvaltferrevldssnikpmnligiargenipavialtdpegcplsrfkdslgnpthilrigesykekqrtiqaakeveqrraggysrkyaskaknladdmvrntardllyyavtqdamlifanlsrgfgrqgkrtfmaerqytrmedwltaklayeglpsktylsktlaqytsktcsncgftitsadydrvleklkktatgwmttingkelkvegqityynrykrqnvvkdlsveldrlseesvnndisswtkgrsgealsllkkrfshrpvqekfvclncgfethaaeqaalniarswlflrsqeykkyqtnkttgntdkrafvetwqsfyrkklkevwkpav >7wb3_AB:NADP-binding_Rossmann-fold_domains;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF T. MARITIMA REX IN TERNARY COMPLEX organism=Thermotoga maritima MSB8 DNA sequence DA(C1):DT(D22) DT(C2):DA(D21) DT(C3):DA(D20) DT(C4):DA(D19) DG(C5):DC(D18) DA(C6):DT(D17) DG(C7):DC(D16) DA(C8):DT(D15) DA(C9):DT(D14) DA(C10):DT(D13) DT(C11):DA(D12) DT(C12):DA(D11) DT(C13):DA(D10) DA(C14):DT(D9) DT(C15):DA(D8) DC(C16):DG(D7) DA(C17):DT(D6) DC(C18):DG(D5) DA(C19):DT(D4) DA(C20):DT(D3) DA(C21):DT(D2) DA(C22):DT(D1) chainA ( 41) SER45 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG48 0 0 0 12 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) LYS49 0 0 0 0 0 3 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR53 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG60 0 2 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 41) SER45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 44) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 12 0 0 0 ( 45) LYS49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 5 0 0 0 0 0 ( 48) SER52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 56) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 5 0 ( 58) VAL62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence ipkpvskrlvsyymclerlldegvevvsseelarrldlkaSqiRKdlSYfgefgkRgvgynvehlydaigeilgvkkewklvvvgagnigravanytvmkekgfriigifdsdpskigkeaapgltvsdvselekfveehgveigviavpaehaqeiaerlekagikgilnfapvkikvsvpveniditaslrvltfeivrrn/ipkpvskrlvsyymclerlldegvevvsseelarrldlkaSqiRKdlSyfgefgkRgVgynvehlydaigeilgvkkewklvvvgagnigravanytvmkekgfriigifdsdpskigkeaapgltvsdvselekfveehgveigviavpaehaqeiaerlekagikgilnfapvkikvsvpveniditaslrvltfeivrrn >7wb3_B:NADP-binding_Rossmann-fold_domains;"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF T. MARITIMA REX IN TERNARY COMPLEX organism=Thermotoga maritima MSB8 DNA sequence DA(C1):DT(D22) DT(C2):DA(D21) DT(C3):DA(D20) DT(C4):DA(D19) DG(C5):DC(D18) DA(C6):DT(D17) DG(C7):DC(D16) DA(C8):DT(D15) DA(C9):DT(D14) DA(C10):DT(D13) DT(C11):DA(D12) DT(C12):DA(D11) DT(C13):DA(D10) DA(C14):DT(D9) DT(C15):DA(D8) DC(C16):DG(D7) DA(C17):DT(D6) DC(C18):DG(D5) DA(C19):DT(D4) DA(C20):DT(D3) DA(C21):DT(D2) DA(C22):DT(D1) chainB ( 41) SER45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 44) ARG48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 12 0 0 0 ( 45) LYS49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 5 0 0 0 0 0 ( 48) SER52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 56) ARG60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 5 0 ( 58) VAL62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence ipkpvskrlvsyymclerlldegvevvsseelarrldlkaSqiRKdlSyfgefgkRgVgynvehlydaigeilgvkkewklvvvgagnigravanytvmkekgfriigifdsdpskigkeaapgltvsdvselekfveehgveigviavpaehaqeiaerlekagikgilnfapvkikvsvpveniditaslrvltfeivrrn >7wbw_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH ELF1 AND SPT4/5, STALLED AT SHL(-3.5) OF THE NUCLEOSOME organism=? DNA sequence DA(T-72):DT(N72) DT(T-71):DA(N71) DC(T-70):DG(N70) DA(T-69):DT(N69) DG(T-68):DC(N68) DA(T-67):DT(N67) DA(T-66):DT(N66) DT(T-65):DA(N65) DC(T-64):DG(N64) DC(T-63):DG(N63) DC(T-62):DG(N62) DG(T-61):DC(N61) DG(T-60):DC(N60) DT(T-59):DA(N59) DG(T-58):DC(N58) DC(T-57):DG(N57) DC(T-56):DG(N56) DG(T-55):DC(N55) DA(T-54):DT(N54) DG(T-53):DC(N53) DG(T-52):DC(N52) DC(T-51):DG(N51) DC(T-50):DG(N50) DG(T-49):DC(N49) DC(T-48):DG(N48) DT(T-47):DA(N47) DC(T-46):DG(N46) DA(T-45):DT(N45) DA(T-44):DT(N44) DT(T-43):DA(N43) DT(T-42):DA(N42) DG(T-41):DC(N41) DG(T-40):DC(N40) DT(T-39):DA(N39) DC(T-38):DG(N38) DG(T-37):DC(N37) DT(T-36):DA(N36) DA(T-35):DT(N35) DG(T-34):DC(N34) DA(T-33):DT(N33) DC(T-32):DG(N32) DA(T-31):DT(N31) DG(T-30):DC(N30) DC(T-29):DG(N29) DT(T-28):DA(N28) DC(T-27):DG(N27) DT(T-26):DA(N26) DA(T-25):DT(N25) DG(T-24):DC(N24) DC(T-23):DG(N23) DA(T-22):DT(N22) DC(T-21):DG(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DT(T-17):DA(N17) DT(T-16):DA(N16) DA(T-15):DT(N15) DA(T-14):DT(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DG(T-11):DC(N11) DC(T-10):DG(N10) DA(T-9):DT(N9) DC(T-8):DG(N8) DG(T-7):DC(N7) DT(T-6):DA(N6) DA(T-5):DT(N5) DC(T-4):DG(N4) DG(T-3):DC(N3) DC(T-2):DG(N2) DG(T-1):DC(N1) DC(T0):DG(N0) DT(T1):DA(N-1) DG(T2):DC(N-2) DT(T3):DA(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DC(T7):DG(N-7) DC(T8):DG(N-8) DG(T9):DC(N-9) DC(T10):DG(N-10) DG(T11):DC(N-11) DT(T12):DA(N-12) DT(T13):DA(N-13) DT(T14):DA(N-14) DT(T15):DA(N-15) DA(T16):DT(N-16) DA(T17):DT(N-17) DC(T18):DG(N-18) DC(T19):DG(N-19) DG(T20):DC(N-20) DC(T21):DG(N-21) DC(T22):DG(N-22) DA(T23):DT(N-23) DA(T24):DT(N-24) DG(T25):DC(N-25) DG(T26):DC(N-26) DG(T27):DC(N-27) DG(T28):DC(N-28) DA(T29):DT(N-29) DT(T30):DA(N-30) DT(T31):DA(N-31) DA(T32):DT(N-32) DC(T33):DG(N-33) DA(T34):DT(N-34) DC(T35):DG(N-35) DC(T36):DG(N-36) DC(T37):DG(N-37) DA(T38):DT(N-38) DA(T39):DT(N-39) DG(T40):DC(N-40) DA(T41):DT(N-41) DC(T42):DG(N-42) DA(T43):DT(N-43) DC(T44):DG(N-44) DC(T45):DG(N-45) DA(T46):DT(N-46) DG(T47):DC(N-47) DG(T48):DC(N-48) DC(T49):DG(N-49) DA(T50):DT(N-50) DC(T51):DG(N-51) DG(T52):DC(N-52) DA(T53):DT(N-53) DG(T54):DC(N-54) DA(T55):DT(N-55) DC(T56):DG(N-56) DA(T57):DT(N-57) DG(T58):DC(N-58) DA(T64):DT(N-64) DA(T65):DT(N-65) DC(T66):DG(N-66) DA(T67):DT(N-67) DA(T68):DT(N-68) DC(T69):DG(N-69) DG(T70):DC(N-70) DA(T71):DT(N-71) DA(T72):DT(N-72) DA(T73):DT(N-73) DA(T74):DT(N-74) DC(T75):DG(N-75) DG(T76):DC(N-76) DG(T77):DC(N-77) DC(T78):DG(N-78) DC(T79):DG(N-79) DA(T80):DT(N-80) DC(T81):DG(N-81) chainA (239) MET253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) LYS318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 40 0 0 0 0 0 0 0 0 0 0 0 0 (1338) ARG1389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sqfpyssaplrsvkevqfgllspeeiraisvvkieypeimdesrqrpregglndpklgsidrnfkcqtcgegmaecpghfghmelakpvfhigfipkikkvcecicmncgkllldetnptmaqairirdpkkrfnavwqlcktkmvceadapvsrggcgntqpvvrkdgmklwgtwkksrdaqperklltpgeilnvfkhispedcfrlgfnedyarpewmiitvlpvpppqvrpsiaMdettqgqddlthklsdilkaninvqklemdgspqhiineveqllqfhvatymdndiagqpqalqKsgrpvkairarlkgkegrlrgnlmgkrvdfsartvisgdpnleldqvgvpisiaktlsypetvtqynihrlteyvrngpnehpgakyvirdngdridlryhkragdivlqygwkverhlmdddpvlfnrqpslhkmsmmahrvkvmpystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpvmgivqdtlcgvrkmtlrdtfieyeqvmnmlfwvpswdgvvpqpailkpkplwtgkqllsiaipsgihlqrtdggnsllspkdngmlivdgkvmfgvvdkktvgsgggglihtvmrekgpkicaelfgniqkvvnywllhngfsigigdaiadastmkeithaissakeqvqeiiykaqhnelelkpgmtlresfegevsrtlndardsagrsaemnlkdlnnvkqmvsagskgsfiniaqmsacvgqqmvegkriafgfadrslphftkddfspeskgfvensylrgltpqefffhamagreglidtavktaetgyiqrrlvkaledimvhydgttrnslgdiiqflygedgldgtqverqtidtipgsdkafhkryyvdlmdeknsikpdvieyaadilgdvelqkelnseyeqlvsdrkflreivfvngdhnwplpvnlrriiqnaqqifhldrakasdltipeiihgvrdlckklfvlrgenelikeaqqnatslfqclvrarlatrrileefrlnrdafewvlgtieaqfqrslvhpgemvgviaaqsigepatqmnvtlgvprlkeilnvakniktpaltvyldreialdiekakviqssieyttlknvtsateiyydpdptstvieedfdtveayfsqspwllrleldrarmldkqltmnqvadkisevfsddlfvmwsednadkliircrvieedqmlkrieahmldlialrgipgiskvymvkhkvsvpdesgeykneelwaletdginlaevmavpgvdssrtysnsfveilsvlgieatrsslykeilnviafdgsyvnyrhmallvdvmtsrgylmaitRhginradtgalmrcsfeetveilfeagaaaelddcrgvsenvmlgqlapmgtgafdvmideklltslpadyapt >7wbx_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH ELF1 AND SPT4/5, STALLED AT SHL(-3) OF THE NUCLEOSOME organism=? DNA sequence DC(N-77):DA(T72) DC(N-76):DA(T71) DG(N-75):DG(T70) DT(N-74):DC(T69) DT(N-73):DA(T68) DT(N-72):DA(T67) DT(N-71):DC(T66) DC(N-70):DA(T65) DG(N-69):DA(T64) DT(N-68):DA(T63) DT(N-67):DA(T62) DG(N-66):DA(T61) DT(N-65):DA(T60) DT(N-64):DA(T59) DT(N-63):DG(T58) DT(N-62):DA(T57) DT(N-61):DC(T56) DT(N-60):DC(T55) DC(N-54):DG(T54) DT(N-53):DA(T53) DC(N-52):DG(T52) DG(N-51):DC(T51) DT(N-50):DA(T50) DG(N-49):DC(T49) DC(N-48):DG(T48) DC(N-47):DG(T47) DT(N-46):DA(T46) DG(N-45):DC(T45) DG(N-44):DC(T44) DT(N-43):DA(T43) DG(N-42):DC(T42) DT(N-41):DA(T41) DC(N-40):DG(T40) DT(N-39):DA(T39) DT(N-38):DA(T38) DG(N-37):DC(T37) DG(N-36):DC(T36) DG(N-35):DC(T35) DT(N-34):DA(T34) DG(N-33):DC(T33) DT(N-32):DA(T32) DA(N-31):DT(T31) DA(N-30):DT(T30) DT(N-29):DA(T29) DC(N-28):DG(T28) DC(N-27):DG(T27) DC(N-26):DG(T26) DC(N-25):DG(T25) DT(N-24):DA(T24) DT(N-23):DA(T23) DG(N-22):DC(T22) DG(N-21):DC(T21) DC(N-20):DG(T20) DG(N-19):DC(T19) DG(N-18):DC(T18) DT(N-17):DA(T17) DT(N-16):DA(T16) DA(N-15):DT(T15) DA(N-14):DT(T14) DA(N-13):DT(T13) DA(N-12):DT(T12) DC(N-11):DG(T11) DG(N-10):DC(T10) DC(N-9):DG(T9) DG(N-8):DC(T8) DG(N-7):DC(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DA(N-3):DT(T3) DC(N-2):DG(T2) DA(N-1):DT(T1) DG(N0):DC(T0) DC(N1):DG(T-1) DG(N2):DC(T-2) DC(N3):DG(T-3) DG(N4):DC(T-4) DT(N5):DA(T-5) DA(N6):DT(T-6) DC(N7):DG(T-7) DG(N8):DC(T-8) DT(N9):DA(T-9) DG(N10):DC(T-10) DC(N11):DG(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DT(N14):DA(T-14) DT(N15):DA(T-15) DA(N16):DT(T-16) DA(N17):DT(T-17) DG(N18):DC(T-18) DC(N19):DG(T-19) DG(N20):DC(T-20) DG(N21):DC(T-21) DT(N22):DA(T-22) DG(N23):DC(T-23) DC(N24):DG(T-24) DT(N25):DA(T-25) DA(N26):DT(T-26) DG(N27):DC(T-27) DA(N28):DT(T-28) DG(N29):DC(T-29) DC(N30):DG(T-30) DT(N31):DA(T-31) DG(N32):DC(T-32) DT(N33):DA(T-33) DC(N34):DG(T-34) DT(N35):DA(T-35) DA(N36):DT(T-36) DC(N37):DG(T-37) DG(N38):DC(T-38) DA(N39):DT(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DA(N42):DT(T-42) DA(N43):DT(T-43) DT(N44):DA(T-44) DT(N45):DA(T-45) DG(N46):DC(T-46) DA(N47):DT(T-47) DG(N48):DC(T-48) DC(N49):DG(T-49) DG(N50):DC(T-50) DG(N51):DC(T-51) DC(N52):DG(T-52) DC(N53):DG(T-53) DT(N54):DA(T-54) DC(N55):DG(T-55) DG(N56):DC(T-56) DG(N57):DC(T-57) DC(N58):DG(T-58) DA(N59):DT(T-59) DC(N60):DG(T-60) DC(N61):DG(T-61) DG(N62):DC(T-62) DG(N63):DC(T-63) DG(N64):DC(T-64) DA(N65):DT(T-65) DT(N66):DA(T-66) DT(N67):DA(T-67) DC(N68):DG(T-68) DT(N69):DA(T-69) DG(N70):DC(T-70) DA(N71):DT(T-71) DT(N72):DA(T-72) chainA (239) MET253 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) LYS318 0 0 0 0 0 0 0 8 0 0 0 0 18 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (818) THR832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (819) ALA833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1338) ARG1389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1339) HIS1390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sqfpyssaplrsvkevqfgllspeeiraisvvkieypeimdesrqrpregglndpklgsidrnfkcqtcgegmaecpghfghmelakpvfhigfipkikkvcecicmncgkllldetnptmaqairirdpkkrfnavwqlcktkmvceadapvsrggcgntqpvvrkdgmklwgtwkksrdaqperklltpgeilnvfkhispedcfrlgfnedyarpewmiitvlpvpppqvrpsiaMdettqgqddlthklsdilkaninvqklemdgspqhiineveqllqfhvatymdndiagqpqalqKsgrpvkairarlkgkegrlrgnlmgkrvdfsartvisgdpnleldqvgvpisiaktlsypetvtqynihrlteyvrngpnehpgakyvirdngdridlryhkragdivlqygwkverhlmdddpvlfnrqpslhkmsmmahrvkvmpystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpvmgivqdtlcgvrkmtlrdtfieyeqvmnmlfwvpswdgvvpqpailkpkplwtgkqllsiaipsgihlqrtdggnsllspkdngmlivdgkvmfgvvdkktvgsgggglihtvmrekgpkicaelfgniqkvvnywllhngfsigigdaiadastmkeithaissakeqvqeiiykaqhnelelkpgmtlresfegevsrtlndardsagrsaemnlkdlnnvkqmvsagskgsfiniaqmsacvgqqmvegkriafgfadrslphftkddfspeskgfvensylrgltpqefffhamagreglidtavkTAetgyiqrrlvkaledimvhydgttrnslgdiiqflygedgldgtqverqtidtipgsdkafhkryyvdlmdeknsikpdvieyaadilgdvelqkelnseyeqlvsdrkflreivfvngdhnwplpvnlrriiqnaqqifhldrakasdltipeiihgvrdlckklfvlrgenelikeaqqnatslfqclvrarlatrrileefrlnrdafewvlgtieaqfqrslvhpgemvgviaaqsigepatqmnvtlgvprlkeilnvakniktpaltvyldreialdiekakviqssieyttlknvtsateiyydpdptstvieedfdtveayfsqspwllrleldrarmldkqltmnqvadkisevfsddlfvmwsednadkliircrvieedqmlkrieahmldlialrgipgiskvymvkhkvsvpdesgeykneelwaletdginlaevmavpgvdssrtysnsfveilsvlgieatrsslykeilnviafdgsyvnyrhmallvdvmtsrgylmaitRHginradtgalmrcsfeetveilfeagaaaelddcrgvsenvmlgqlapmgtgafdvmideklltslpadyapt >7wju_A:Zinc_beta-ribbon; title=CRYO-EM STRUCTURE OF THE ASCAS12F1-SGRNAV1-DSDNA TERNARY COMPLEX organism=? DNA sequence DC(D25):DG(E6) DA(D26):DT(E5) DA(D27):DT(E4) DC(D28):DG(E3) DG(D29):DC(E2) DC(D30):DG(E1) chainA ( 70) ASN70 4 0 0 0 0 0 ( 72) HIS72 9 5 0 0 0 0 ( 76) TYR76 0 7 7 0 0 0 ( 88) SER88 0 0 2 4 0 0 ( 92) SER92 5 7 1 0 0 0 ( 93) GLN93 6 0 0 0 0 0 ( 96) LYS96 26 0 0 0 0 0 prot.sequence mikvyryeivkpldldwkefgtilrqlqqetrfalnkatqlawewmgfssdykdnhgeypkskdilgytNvHgyaYhtiktkayrlnSgnlSQtiKratdrfkayqkeilrgdmsipsykrdipldlikenisvnrmnhgdyiaslsllsnpakqemnvkrkisviiivrgagktimdrilsgeyqvsasqiihddrknkwylnisydfepqtrvldlnkimgialgvavavymafqhtparykleggeienfrrqvesrrismgghgrdkrikpieqlrdkianfrdttnhrysryivdmaikegcgtiqmedltnirdigsrflqnwtyydlqqkiiykaeeagikvikidpqytsqrcsecgnidsgnrigqaifkcracgyeanadynaarniaipnidkiia >7wlr_ABCDEFGH:Histone-fold; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING KOMAGATAELLA PASTORIS HISTONES organism=? DNA sequence DA(I1):DT(J145) DT(I2):DA(J144) DC(I3):DG(J143) DA(I4):DT(J142) DG(I5):DC(J141) DA(I6):DT(J140) DA(I7):DT(J139) DT(I8):DA(J138) DC(I9):DG(J137) DC(I10):DG(J136) DC(I11):DG(J135) DG(I12):DC(J134) DG(I13):DC(J133) DT(I14):DA(J132) DG(I15):DC(J131) DC(I16):DG(J130) DC(I17):DG(J129) DG(I18):DC(J128) DA(I19):DT(J127) DG(I20):DC(J126) DG(I21):DC(J125) DC(I22):DG(J124) DC(I23):DG(J123) DG(I24):DC(J122) DC(I25):DG(J121) DT(I26):DA(J120) DC(I27):DG(J119) DA(I28):DT(J118) DA(I29):DT(J117) DT(I30):DA(J116) DT(I31):DA(J115) DG(I32):DC(J114) DG(I33):DC(J113) DT(I34):DA(J112) DC(I35):DG(J111) DG(I36):DC(J110) DT(I37):DA(J109) DA(I38):DT(J108) DG(I39):DC(J107) DA(I40):DT(J106) DC(I41):DG(J105) DA(I42):DT(J104) DG(I43):DC(J103) DC(I44):DG(J102) DT(I45):DA(J101) DC(I46):DG(J100) DT(I47):DA(J99) DA(I48):DT(J98) DG(I49):DC(J97) DC(I50):DG(J96) DA(I51):DT(J95) DC(I52):DG(J94) DC(I53):DG(J93) DG(I54):DC(J92) DC(I55):DG(J91) DT(I56):DA(J90) DT(I57):DA(J89) DA(I58):DT(J88) DA(I59):DT(J87) DA(I60):DT(J86) DC(I61):DG(J85) DG(I62):DC(J84) DC(I63):DG(J83) DA(I64):DT(J82) DC(I65):DG(J81) DG(I66):DC(J80) DT(I67):DA(J79) DA(I68):DT(J78) DC(I69):DG(J77) DG(I70):DC(J76) DC(I71):DG(J75) DG(I72):DC(J74) DC(I73):DG(J73) DT(I74):DA(J72) DG(I75):DC(J71) DT(I76):DA(J70) DC(I77):DG(J69) DC(I78):DG(J68) DC(I79):DG(J67) DC(I80):DG(J66) DC(I81):DG(J65) DG(I82):DC(J64) DC(I83):DG(J63) DG(I84):DC(J62) DT(I85):DA(J61) DT(I86):DA(J60) DT(I87):DA(J59) DT(I88):DA(J58) DA(I89):DT(J57) DA(I90):DT(J56) DC(I91):DG(J55) DC(I92):DG(J54) DG(I93):DC(J53) DC(I94):DG(J52) DC(I95):DG(J51) DA(I96):DT(J50) DA(I97):DT(J49) DG(I98):DC(J48) DG(I99):DC(J47) DG(I100):DC(J46) DG(I101):DC(J45) DA(I102):DT(J44) DT(I103):DA(J43) DT(I104):DA(J42) DA(I105):DT(J41) DC(I106):DG(J40) DT(I107):DA(J39) DC(I108):DG(J38) DC(I109):DG(J37) DC(I110):DG(J36) DT(I111):DA(J35) DA(I112):DT(J34) DG(I113):DC(J33) DT(I114):DA(J32) DC(I115):DG(J31) DT(I116):DA(J30) DC(I117):DG(J29) DC(I118):DG(J28) DA(I119):DT(J27) DG(I120):DC(J26) DG(I121):DC(J25) DC(I122):DG(J24) DA(I123):DT(J23) DC(I124):DG(J22) DG(I125):DC(J21) DT(I126):DA(J20) DG(I127):DC(J19) DT(I128):DA(J18) DC(I129):DG(J17) DA(I130):DT(J16) DG(I131):DC(J15) DA(I132):DT(J14) DT(I133):DA(J13) DA(I134):DT(J12) DT(I135):DA(J11) DA(I136):DT(J10) DT(I137):DA(J9) DA(I138):DT(J8) DC(I139):DG(J7) DA(I140):DT(J6) DT(I141):DA(J5) DC(I142):DG(J4) DG(I143):DC(J3) DA(I144):DT(J2) DT(I145):DA(J1) chainA ( 1) HIS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 2) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD ( 1) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR42 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence HRykpgtvalreirrfqkstellirklpfqrlvreiaqdfktdlrfqssaigalqesveaylvslfedtnlcaihakrvtiqkkdillarrlrger/KIlrdniqgitkpairrlarrggvkrisaliyeevravlktflenvirdavtytehakrktvtsldvvyalkrqgrtlygfgg/TSrsskagltfpvgrvhrllrrgnyaqrigsgapvyltavleylaaeilelagnaardnkksriiprhlqlairndeelnkllghvtiaqggvlpniqsellpk/Rkesyasyiykvlkqthpdtgisqkamsimnsfvndiferiaseasklasynkkstisareiqtavrlilpgelskhavsegtravtkytsstqa/hRYkpgtvalreirrfqkstellirklpfqrlvreiaqdfktdlRfqssaigalqesveaylvslfedtnlcaihakrvtiqkkdillarrlrger/iLRdniqgitkpairrlarrggvkrisaliyeevravlktflenVirdavtytehakrktvtsldvvyalkrqgrtlygfgg/astsrsskagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkksriiprhlqlairndeelnkllghvtiaqggvlpniqsellpk/kesyasyiykvlkqthpdtgisqkamsimNsfvndiferiaseasklasynkkstisareiqtavrlilpgelskhavsegtravtkytsst >7wlr_D:Histone-fold; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING KOMAGATAELLA PASTORIS HISTONES organism=? DNA sequence DA(J1):DT(I145) DT(J2):DA(I144) DC(J3):DG(I143) DG(J4):DC(I142) DA(J5):DT(I141) DT(J6):DA(I140) DG(J7):DC(I139) DT(J8):DA(I138) DA(J9):DT(I137) DT(J10):DA(I136) DA(J11):DT(I135) DT(J12):DA(I134) DA(J13):DT(I133) DT(J14):DA(I132) DC(J15):DG(I131) DT(J16):DA(I130) DG(J17):DC(I129) DA(J18):DT(I128) DC(J19):DG(I127) DA(J20):DT(I126) DC(J21):DG(I125) DG(J22):DC(I124) DT(J23):DA(I123) DG(J24):DC(I122) DC(J25):DG(I121) DC(J26):DG(I120) DT(J27):DA(I119) DG(J28):DC(I118) DG(J29):DC(I117) DA(J30):DT(I116) DG(J31):DC(I115) DA(J32):DT(I114) DC(J33):DG(I113) DT(J34):DA(I112) DA(J35):DT(I111) DG(J36):DC(I110) DG(J37):DC(I109) DG(J38):DC(I108) DA(J39):DT(I107) DG(J40):DC(I106) DT(J41):DA(I105) DA(J42):DT(I104) DA(J43):DT(I103) DT(J44):DA(I102) DC(J45):DG(I101) DC(J46):DG(I100) DC(J47):DG(I99) DC(J48):DG(I98) DT(J49):DA(I97) DT(J50):DA(I96) DG(J51):DC(I95) DG(J52):DC(I94) DC(J53):DG(I93) DG(J54):DC(I92) DG(J55):DC(I91) DT(J56):DA(I90) DT(J57):DA(I89) DA(J58):DT(I88) DA(J59):DT(I87) DA(J60):DT(I86) DA(J61):DT(I85) DC(J62):DG(I84) DG(J63):DC(I83) DC(J64):DG(I82) DG(J65):DC(I81) DG(J66):DC(I80) DG(J67):DC(I79) DG(J68):DC(I78) DG(J69):DC(I77) DA(J70):DT(I76) DC(J71):DG(I75) DA(J72):DT(I74) DG(J73):DC(I73) DC(J74):DG(I72) DG(J75):DC(I71) DC(J76):DG(I70) DG(J77):DC(I69) DT(J78):DA(I68) DA(J79):DT(I67) DC(J80):DG(I66) DG(J81):DC(I65) DT(J82):DA(I64) DG(J83):DC(I63) DC(J84):DG(I62) DG(J85):DC(I61) DT(J86):DA(I60) DT(J87):DA(I59) DT(J88):DA(I58) DA(J89):DT(I57) DA(J90):DT(I56) DG(J91):DC(I55) DC(J92):DG(I54) DG(J93):DC(I53) DG(J94):DC(I52) DT(J95):DA(I51) DG(J96):DC(I50) DC(J97):DG(I49) DT(J98):DA(I48) DA(J99):DT(I47) DG(J100):DC(I46) DA(J101):DT(I45) DG(J102):DC(I44) DC(J103):DG(I43) DT(J104):DA(I42) DG(J105):DC(I41) DT(J106):DA(I40) DC(J107):DG(I39) DT(J108):DA(I38) DA(J109):DT(I37) DC(J110):DG(I36) DG(J111):DC(I35) DA(J112):DT(I34) DC(J113):DG(I33) DC(J114):DG(I32) DA(J115):DT(I31) DA(J116):DT(I30) DT(J117):DA(I29) DT(J118):DA(I28) DG(J119):DC(I27) DA(J120):DT(I26) DG(J121):DC(I25) DC(J122):DG(I24) DG(J123):DC(I23) DG(J124):DC(I22) DC(J125):DG(I21) DC(J126):DG(I20) DT(J127):DA(I19) DC(J128):DG(I18) DG(J129):DC(I17) DG(J130):DC(I16) DC(J131):DG(I15) DA(J132):DT(I14) DC(J133):DG(I13) DC(J134):DG(I12) DG(J135):DC(I11) DG(J136):DC(I10) DG(J137):DC(I9) DA(J138):DT(I8) DT(J139):DA(I7) DT(J140):DA(I6) DC(J141):DG(I5) DT(J142):DA(I4) DG(J143):DC(I3) DA(J144):DT(I2) DT(J145):DA(I1) chainD ( 1) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Rkesyasyiykvlkqthpdtgisqkamsimnsfvndiferiaseasklasynkkstisareiqtavrlilpgelskhavsegtravtkytsstqa >7wlr_E:Histone-fold; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING KOMAGATAELLA PASTORIS HISTONES organism=? DNA sequence DA(J1):DT(I145) DT(J2):DA(I144) DC(J3):DG(I143) DG(J4):DC(I142) DA(J5):DT(I141) DT(J6):DA(I140) DG(J7):DC(I139) DT(J8):DA(I138) DA(J9):DT(I137) DT(J10):DA(I136) DA(J11):DT(I135) DT(J12):DA(I134) DA(J13):DT(I133) DT(J14):DA(I132) DC(J15):DG(I131) DT(J16):DA(I130) DG(J17):DC(I129) DA(J18):DT(I128) DC(J19):DG(I127) DA(J20):DT(I126) DC(J21):DG(I125) DG(J22):DC(I124) DT(J23):DA(I123) DG(J24):DC(I122) DC(J25):DG(I121) DC(J26):DG(I120) DT(J27):DA(I119) DG(J28):DC(I118) DG(J29):DC(I117) DA(J30):DT(I116) DG(J31):DC(I115) DA(J32):DT(I114) DC(J33):DG(I113) DT(J34):DA(I112) DA(J35):DT(I111) DG(J36):DC(I110) DG(J37):DC(I109) DG(J38):DC(I108) DA(J39):DT(I107) DG(J40):DC(I106) DT(J41):DA(I105) DA(J42):DT(I104) DA(J43):DT(I103) DT(J44):DA(I102) DC(J45):DG(I101) DC(J46):DG(I100) DC(J47):DG(I99) DC(J48):DG(I98) DT(J49):DA(I97) DT(J50):DA(I96) DG(J51):DC(I95) DG(J52):DC(I94) DC(J53):DG(I93) DG(J54):DC(I92) DG(J55):DC(I91) DT(J56):DA(I90) DT(J57):DA(I89) DA(J58):DT(I88) DA(J59):DT(I87) DA(J60):DT(I86) DA(J61):DT(I85) DC(J62):DG(I84) DG(J63):DC(I83) DC(J64):DG(I82) DG(J65):DC(I81) DG(J66):DC(I80) DG(J67):DC(I79) DG(J68):DC(I78) DG(J69):DC(I77) DA(J70):DT(I76) DC(J71):DG(I75) DA(J72):DT(I74) DG(J73):DC(I73) DC(J74):DG(I72) DG(J75):DC(I71) DC(J76):DG(I70) DG(J77):DC(I69) DT(J78):DA(I68) DA(J79):DT(I67) DC(J80):DG(I66) DG(J81):DC(I65) DT(J82):DA(I64) DG(J83):DC(I63) DC(J84):DG(I62) DG(J85):DC(I61) DT(J86):DA(I60) DT(J87):DA(I59) DT(J88):DA(I58) DA(J89):DT(I57) DA(J90):DT(I56) DG(J91):DC(I55) DC(J92):DG(I54) DG(J93):DC(I53) DG(J94):DC(I52) DT(J95):DA(I51) DG(J96):DC(I50) DC(J97):DG(I49) DT(J98):DA(I48) DA(J99):DT(I47) DG(J100):DC(I46) DA(J101):DT(I45) DG(J102):DC(I44) DC(J103):DG(I43) DT(J104):DA(I42) DG(J105):DC(I41) DT(J106):DA(I40) DC(J107):DG(I39) DT(J108):DA(I38) DA(J109):DT(I37) DC(J110):DG(I36) DG(J111):DC(I35) DA(J112):DT(I34) DC(J113):DG(I33) DC(J114):DG(I32) DA(J115):DT(I31) DA(J116):DT(I30) DT(J117):DA(I29) DT(J118):DA(I28) DG(J119):DC(I27) DA(J120):DT(I26) DG(J121):DC(I25) DC(J122):DG(I24) DG(J123):DC(I23) DG(J124):DC(I22) DC(J125):DG(I21) DC(J126):DG(I20) DT(J127):DA(I19) DC(J128):DG(I18) DG(J129):DC(I17) DG(J130):DC(I16) DC(J131):DG(I15) DA(J132):DT(I14) DC(J133):DG(I13) DC(J134):DG(I12) DG(J135):DC(I11) DG(J136):DC(I10) DG(J137):DC(I9) DA(J138):DT(I8) DT(J139):DA(I7) DT(J140):DA(I6) DC(J141):DG(I5) DT(J142):DA(I4) DG(J143):DC(I3) DA(J144):DT(I2) DT(J145):DA(I1) chainE ( 2) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 45) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hRykpgtvalreirrfqkstellirklpfqrlvreiaqdfktdlrfqssaigalqesveaylvslfedtnlcaihakrvtiqkkdillarrlrger >7wlr_G:Histone-fold; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING KOMAGATAELLA PASTORIS HISTONES organism=? DNA sequence DA(I1):DT(J145) DT(I2):DA(J144) DC(I3):DG(J143) DA(I4):DT(J142) DG(I5):DC(J141) DA(I6):DT(J140) DA(I7):DT(J139) DT(I8):DA(J138) DC(I9):DG(J137) DC(I10):DG(J136) DC(I11):DG(J135) DG(I12):DC(J134) DG(I13):DC(J133) DT(I14):DA(J132) DG(I15):DC(J131) DC(I16):DG(J130) DC(I17):DG(J129) DG(I18):DC(J128) DA(I19):DT(J127) DG(I20):DC(J126) DG(I21):DC(J125) DC(I22):DG(J124) DC(I23):DG(J123) DG(I24):DC(J122) DC(I25):DG(J121) DT(I26):DA(J120) DC(I27):DG(J119) DA(I28):DT(J118) DA(I29):DT(J117) DT(I30):DA(J116) DT(I31):DA(J115) DG(I32):DC(J114) DG(I33):DC(J113) DT(I34):DA(J112) DC(I35):DG(J111) DG(I36):DC(J110) DT(I37):DA(J109) DA(I38):DT(J108) DG(I39):DC(J107) DA(I40):DT(J106) DC(I41):DG(J105) DA(I42):DT(J104) DG(I43):DC(J103) DC(I44):DG(J102) DT(I45):DA(J101) DC(I46):DG(J100) DT(I47):DA(J99) DA(I48):DT(J98) DG(I49):DC(J97) DC(I50):DG(J96) DA(I51):DT(J95) DC(I52):DG(J94) DC(I53):DG(J93) DG(I54):DC(J92) DC(I55):DG(J91) DT(I56):DA(J90) DT(I57):DA(J89) DA(I58):DT(J88) DA(I59):DT(J87) DA(I60):DT(J86) DC(I61):DG(J85) DG(I62):DC(J84) DC(I63):DG(J83) DA(I64):DT(J82) DC(I65):DG(J81) DG(I66):DC(J80) DT(I67):DA(J79) DA(I68):DT(J78) DC(I69):DG(J77) DG(I70):DC(J76) DC(I71):DG(J75) DG(I72):DC(J74) DC(I73):DG(J73) DT(I74):DA(J72) DG(I75):DC(J71) DT(I76):DA(J70) DC(I77):DG(J69) DC(I78):DG(J68) DC(I79):DG(J67) DC(I80):DG(J66) DC(I81):DG(J65) DG(I82):DC(J64) DC(I83):DG(J63) DG(I84):DC(J62) DT(I85):DA(J61) DT(I86):DA(J60) DT(I87):DA(J59) DT(I88):DA(J58) DA(I89):DT(J57) DA(I90):DT(J56) DC(I91):DG(J55) DC(I92):DG(J54) DG(I93):DC(J53) DC(I94):DG(J52) DC(I95):DG(J51) DA(I96):DT(J50) DA(I97):DT(J49) DG(I98):DC(J48) DG(I99):DC(J47) DG(I100):DC(J46) DG(I101):DC(J45) DA(I102):DT(J44) DT(I103):DA(J43) DT(I104):DA(J42) DA(I105):DT(J41) DC(I106):DG(J40) DT(I107):DA(J39) DC(I108):DG(J38) DC(I109):DG(J37) DC(I110):DG(J36) DT(I111):DA(J35) DA(I112):DT(J34) DG(I113):DC(J33) DT(I114):DA(J32) DC(I115):DG(J31) DT(I116):DA(J30) DC(I117):DG(J29) DC(I118):DG(J28) DA(I119):DT(J27) DG(I120):DC(J26) DG(I121):DC(J25) DC(I122):DG(J24) DA(I123):DT(J23) DC(I124):DG(J22) DG(I125):DC(J21) DT(I126):DA(J20) DG(I127):DC(J19) DT(I128):DA(J18) DC(I129):DG(J17) DA(I130):DT(J16) DG(I131):DC(J15) DA(I132):DT(J14) DT(I133):DA(J13) DA(I134):DT(J12) DT(I135):DA(J11) DA(I136):DT(J10) DT(I137):DA(J9) DA(I138):DT(J8) DC(I139):DG(J7) DA(I140):DT(J6) DT(I141):DA(J5) DC(I142):DG(J4) DG(I143):DC(J3) DA(I144):DT(J2) DT(I145):DA(J1) chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence astsrsskagltfpvgrvhrllrrgnyaqRigsgapvyltavleylaaeilelagnaardnkksriiprhlqlairndeelnkllghvtiaqggvlpniqsellpk >7wnh_D:Nuclear_receptor_ligand-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF NURR1 BINDING TO NBRE organism=Homo sapiens DNA sequence DC(O261):DG(N276) DG(O262):DC(N275) DC(O263):DG(N274) DA(O264):DT(N273) DT(O265):DA(N272) DG(O266):DC(N271) DA(O267):DT(N270) DC(O268):DG(N269) DC(O269):DG(N268) DT(O270):DA(N267) DT(O271):DA(N266) DT(O272):DA(N265) DT(O273):DA(N264) DC(O274):DG(N263) DG(O275):DC(N262) DG(O276):DC(N261) chainD ( 10) CYS272 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 19) GLU281 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 ( 22) LYS284 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 ( 26) LYS288 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 ( 27) ARG289 0 0 0 0 12 8 0 0 0 0 0 0 0 0 0 0 ( 80) ARG342 0 0 0 0 0 0 0 0 2 8 1 0 0 0 0 0 ( 82) ARG344 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 0 prot.sequence cavcgdnaaCqhygvrtcEgcKgffKRtvqknakyvclankncpvdkrrrnrcqycrfqkclavgmvkevvrtdslkgrRgRlppvslisalvrahvdsnpamtsldysrfqanpsgddtqhiqqfydlltgsmeiirgwaekipgfadlpkadqdllfesaflelfvlrlayrsnpvegklifcngvvlhrlqcvrgfgewidsivefssnlqnmnidisafsciaalamvterhglkepkrveelqnkivnclkdhvtfnngglnrpnylskllgklpelrtlctqglqrifylkledlvpppaiidklfldtl >7wnr_BC:Ribbon-helix-helix; title=DATA-DRIVEN HADDOCK MODEL OF MYCOBACTERIAL NMAZE6-OPERATOR DNA COMPLEX organism=? DNA sequence DC(A1):DG(D36) DC(A2):DG(D35) DG(A3):DC(D34) DG(A4):DC(D33) DT(A5):DA(D32) DT(A6):DA(D31) DA(A7):DT(D30) DT(A8):DA(D29) DA(A9):DT(D28) DC(A10):DG(D27) DT(A11):DA(D26) DA(A12):DT(D25) DT(A13):DA(D24) DC(A14):DG(D23) DT(A15):DA(D22) DG(A16):DC(D21) DT(A17):DA(D20) DA(A18):DT(D19) chainB ( 2) LYS5 0 0 0 0 0 0 0 2 7 5 0 0 0 0 0 0 0 0 ( 4) ALA7 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 chainC ( 2) LYS5 0 0 0 0 1 8 8 2 1 0 0 0 0 0 0 0 0 0 ( 4) ALA7 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 prot.sequence mKtAislpdetfdrvsrraselgmsrsefftkaaqrylheldaqlltgq/mKtAislpdetfdrvsrraselgmsrsefftkaaqrylheldaqlltgq >7wnr_C:Ribbon-helix-helix; title=DATA-DRIVEN HADDOCK MODEL OF MYCOBACTERIAL NMAZE6-OPERATOR DNA COMPLEX organism=? DNA sequence DC(A1):DG(D36) DC(A2):DG(D35) DG(A3):DC(D34) DG(A4):DC(D33) DT(A5):DA(D32) DT(A6):DA(D31) DA(A7):DT(D30) DT(A8):DA(D29) DA(A9):DT(D28) DC(A10):DG(D27) DT(A11):DA(D26) DA(A12):DT(D25) DT(A13):DA(D24) DC(A14):DG(D23) DT(A15):DA(D22) DG(A16):DC(D21) DT(A17):DA(D20) DA(A18):DT(D19) chainC ( 2) LYS5 0 0 0 0 1 8 8 2 1 0 0 0 0 0 0 0 0 0 ( 4) ALA7 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 prot.sequence mKtAislpdetfdrvsrraselgmsrsefftkaaqrylheldaqlltgq >7wq5_A:DNA-binding_domain; title=CRYSTAL STRUCTURE OF ARABIDOPSIS TRANSCRIPTIONAL FACTOR WRINKLED1 WITH DSDNA organism=Arabidopsis thaliana DNA sequence DG(D1):DC(C24) DT(D2):DA(C23) DG(D3):DC(C22) DG(D4):DC(C21) DA(D5):DT(C20) DC(D6):DG(C19) DG(D7):DC(C18) DA(D8):DT(C17) DT(D9):DA(C16) DG(D10):DC(C15) DA(D11):DT(C14) DA(D12):DT(C13) DA(D13):DT(C12) DC(D14):DG(C11) DC(D15):DG(C10) DG(D16):DC(C9) DA(D17):DT(C8) DG(D18):DC(C7) DG(D19):DC(C6) DA(D20):DT(C5) DA(D21):DT(C4) DG(D22):DC(C3) DT(D23):DA(C2) DA(D24):DT(C1) chainA ( 12) THR70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 ( 14) HIS72 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 8 0 0 0 0 0 0 0 0 ( 16) TRP74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 21) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 5 0 0 0 0 0 0 0 0 ( 23) HIS81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 ( 25) TRP83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 28 4 0 0 0 0 ( 40) GLN98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 12 0 0 0 0 0 0 ( 42) TYR100 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 (114) ALA172 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) HIS174 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) HIS175 0 0 0 2 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) GLU181 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ARG183 0 0 0 0 0 10 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) TYR192 0 0 0 0 0 0 0 8 13 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) TYR194 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence strrssiyrgvTrHrWtgrfEaHlWdksswnsiqnkkgkQvYlgaydseeaaahtydlaalkywgpdtilnfpaetytkeleemqrvtkeeylaslrrqssgfsrgvskyrgvArHHhngrwEaRigrvfgnkYlYlgtyntqeeaaaaydmaaieyrganavtnfdisnyi >7wwv_ABH: title=DNA BOUND-ICP1 CSY COMPLEX organism=? DNA sequence DG(N1):DC(O48) DG(N2):DC(O47) DG(N3):DC(O46) DA(N4):DT(O45) DC(N5):DG(O44) DA(N6):DT(O43) DA(N7):DT(O42) DA(N8):DT(O41) DG(N9):DC(O40) DG(N10):DC(O39) DG(N11):DC(O38) DC(N12):DG(O37) DT(N13):DA(O36) DT(N14):DA(O35) DT(N15):DA(O34) DC(N16):DG(O33) chainA ( 50) LYS50 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 1 (148) ASN148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 (150) GLN150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (151) ASN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 chainB chainH prot.sequence mikemiedfiskgglifthsgrytntnnscfifnkndigvdtkvdmytpKsagikneegenlwqvlnkanmfyriysgelgeelqyllkscctakedvttlpqiyfkngegydilvpignahnlisgteylwehkyyntftqklggsNpQNcthacnkmrggfkqfnctppqvednyna/mrkfiivknvkvdginakssditvgmppattfcglgetmsiktgivvkaVsygsvkfevrgsrfntsvtkfawqdrgnggkannnspiqpkpladgvftlcfevewedcaevlvdkvtnfintariaggtiasfnkpfvkvakdaeeLaSVknammpcyvvvdcgvevnifedavnrklqpmvngykklekivdnkhmrdkftpaylatptytmigykmvsnvdnfdqalwqygentkvktiggiynd/klkapavlaysrkinptnalmfavnwsdrdnttavmvgtktvagtqsvrGnpndadkgniqtvnfanlphnkntllvkynvkfvgdvfkaelgggeysntlqtalentdfgtlayryvyniaagrtlwrnrvgaesietvitvndqtFtFSdllvnefdedvdvaeiadmvagvlsgegfvtlkvehymllgegsevfpsqefvensklskqlfdlngqaamhdqkignairtidtwyedattpiavepygsvvrngvayragnktdlftlmdgavngkslteedqmfvtanlirggvfgg >7wwv_CDEFG: title=DNA BOUND-ICP1 CSY COMPLEX organism=? DNA sequence DT(O3) DT(O4) DA(O5) DA(O6) DA(O7) DT(O8) DA(O9) DG(O10) DG(O11) DG(O12) DA(O13) DA(O14) DG(O15) DA(O16) DT(O17) DA(O18) DA(O19) DG(O20) DC(O21) DA(O22) DA(O23) DA(O24) DG(O25) DG(O26) DG(O27) DT(O28) DT(O29) DG(O30) DA(O31) DC(O32) DG(O33) DA(O34) DA(O35) DA(O36) DG(O37) DC(O38) DC(O39) DC(O40) DT(O41) DT(O42) DT(O43) DG(O44) DT(O45) DC(O46) DC(O47) DC(O48) chainC ( 7) VAL9 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) PHE205 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) GLU207 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) VAL300 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 7) VAL9 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) ALA11 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN61 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ILE62 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) GLN63 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) PHE205 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) GLU207 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER212 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) VAL300 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 7) VAL9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) VAL50 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN61 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ILE62 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) GLN63 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) PHE205 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) GLU207 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER212 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) VAL300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) VAL9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN61 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ILE62 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR64 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) LEU94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) PHE205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) GLU207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER212 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) VAL300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 7) VAL9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) VAL50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ILE62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) LEU94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) PHE205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) VAL300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klkapaVlaysrkinptnalmfavnwsdrdnttavmvgtktvagtqsvrgnpndadkgniqtvnfanlphnkntllvkynvkfvgdvfkaelgggeysntlqtalentdfgtlayryvyniaagrtlwrnrvgaesietvitvndqtftfsdllvnefdedvdvaeiadmvagvlsgegfvtlkvehymllgegsevfpsqeFvEnsklskqlfdlngqaamhdqkignairtidtwyedattpiavepygsvvrngvayragnktdlftlmdgavngkslteedqmfvtanlirggVfgg/klkapaVlAysrkinptnalmfavnwsdrdnttavmvgtktvagtqsvrgnpndadkgNIQtvnfanlphnkntllvkynvkfvgdvfkaelgggeysntlqtalentdfgtlayryvyniaagrtlwrnrvgaesietvitvndqtftfsdllvnefdedvdvaeiadmvagvlsgegfvtlkvehymllgegsevfpsqeFvEnsklSkqlfdlngqaamhdqkignairtidtwyedattpiavepygsvvrngvayragnktdlftlmdgavngkslteedqmfvtanlirggVfgg/klkapaVlaysrkinptnalmfavnwsdrdnttavmvgtktvagtqsVrgnpndadkgNIQtvnfanlphnkntllvkynvkfvgdvfkaelgggeysntlqtalentdfgtlayryvyniaagrtlwrnrvgaesietvitvndqtftfsdllvnefdedvdvaeiadmvagvlsgegfvtlkvehymllgegsevfpsqeFvEnsklSkqlfdlngqaamhdqkignairtidtwyedattpiavepygsvvrngvayragnktdlftlmdgavngkslteedqmfvtanlirggVfgg/klkapaVlaysrkinptnalmfavnwsdrdnttavmvgtktvagtqsvrgnpndadkgNIQTvnfanlphnkntllvkynvkfvgdvfkaeLgggeysntlqtalentdfgtlayryvyniaagrtlwrnrvgaesietvitvndqtftfsdllvnefdedvdvaeiadmvagvlsgegfvtlkvehymllgegsevfpsqeFvEnsklSkqlfdlngqaamhdqkignairtidtwyedattpiavepygsvvrngvayragnktdlftlmdgavngkslteedqmfvtanlirggVfgg/klkapaVlaysrkinptnalmfavnwsdrdnttavmvgtktvagtqsVrgnpndadkgNIQtvnfanlphnkntllvkynvkfvgdvfkaeLgggeysntlqtalentdfgtlayryvyniaagrtlwrnrvgaesietvitvndqtftfsdllvnefdedvdvaeiadmvagvlsgegfvtlkvehymllgegsevfpsqeFvensklSkqlfdlngqaamhdqkignairtidtwyedattpiavepygsvvrngvayragnktdlftlmdgavngkslteedqmfvtanlirggVfgg >7wwv_F: title=DNA BOUND-ICP1 CSY COMPLEX organism=? DNA sequence DT(O3) DT(O4) DA(O5) DA(O6) DA(O7) DT(O8) DA(O9) DG(O10) DG(O11) DG(O12) DA(O13) DA(O14) DG(O15) DA(O16) DT(O17) DA(O18) DA(O19) DG(O20) DC(O21) DA(O22) DA(O23) DA(O24) DG(O25) DG(O26) DG(O27) DT(O28) DT(O29) DG(O30) DA(O31) DC(O32) DG(O33) DA(O34) DA(O35) DA(O36) DG(O37) DC(O38) DC(O39) DC(O40) DT(O41) DT(O42) DT(O43) DG(O44) DT(O45) DC(O46) DC(O47) DC(O48) chainF ( 7) VAL9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASN61 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ILE62 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR64 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) LEU94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) PHE205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) GLU207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) SER212 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) VAL300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence klkapaVlaysrkinptnalmfavnwsdrdnttavmvgtktvagtqsvrgnpndadkgNIQTvnfanlphnkntllvkynvkfvgdvfkaeLgggeysntlqtalentdfgtlayryvyniaagrtlwrnrvgaesietvitvndqtftfsdllvnefdedvdvaeiadmvagvlsgegfvtlkvehymllgegsevfpsqeFvEnsklSkqlfdlngqaamhdqkignairtidtwyedattpiavepygsvvrngvayragnktdlftlmdgavngkslteedqmfvtanlirggVfgg >7x1n_AD:SRF-like; title=CRYSTAL STRUCTURE OF MEF2D-MRE COMPLEX organism=Homo sapiens DNA sequence DA(K2):DT(L14) DC(K4):DG(L13) DT(K5):DA(L12) DA(K6):DT(L11) DT(K7):DA(L10) DT(K8):DA(L9) DT(K9):DA(L8) DA(K10):DT(L7) DT(K11):DA(L6) DA(K12):DT(L5) DA(K13):DT(L4) DG(K14):DT(L2) chainA chainD ( 1) LYS4 0 0 0 0 0 0 0 5 7 5 0 0 prot.sequence kiqiqritdernrqvtftkrkfglmkkayelsvlcdceialiifnhsnklfqyastdmdkvllkyteynephesrtnadiietlrkkgf/Kkiqiqritdernrqvtftkrkfglmkkayelsvlcdceialiifnhsnklfqyastdmdkvllkyteynephesrtnadiietlrkkg >7x1n_BC:SRF-like; title=CRYSTAL STRUCTURE OF MEF2D-MRE COMPLEX organism=Homo sapiens DNA sequence DC(F3):DG(E14) DT(F4):DA(E13) DT(F5):DA(E12) DA(F6):DT(E11) DT(F7):DA(E10) DA(F8):DT(E9) DA(F9):DT(E8) DA(F10):DT(E7) DT(F11):DA(E6) DA(F12):DT(E5) DG(F13):DC(E4) DT(F14):DA(E3) DT(F15):DA(E2) chainB chainC ( 2) ARG3 0 0 0 0 0 0 0 0 3 4 8 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 3 0 0 0 prot.sequence kiqiqritdernrqvtftkrkfglmkkayelsvlcdceialiifnhsnklfqyastdmdkvllkyteynephesrtnadiietlrkkg/gRkkiqiqritdernrqvtftKrkfglmkkayelsvlcdceialiifnhsnklfqyastdmdkvllkyteynephesrtnadiietlrkkgf >7x1n_C:SRF-like; title=CRYSTAL STRUCTURE OF MEF2D-MRE COMPLEX organism=Homo sapiens DNA sequence DC(F3):DG(E14) DT(F4):DA(E13) DT(F5):DA(E12) DA(F6):DT(E11) DT(F7):DA(E10) DA(F8):DT(E9) DA(F9):DT(E8) DA(F10):DT(E7) DT(F11):DA(E6) DA(F12):DT(E5) DG(F13):DC(E4) DT(F14):DA(E3) DT(F15):DA(E2) chainC ( 2) ARG3 0 0 0 0 0 0 0 0 3 4 8 0 0 ( 22) LYS23 0 0 0 0 0 0 0 0 0 3 0 0 0 prot.sequence gRkkiqiqritdernrqvtftKrkfglmkkayelsvlcdceialiifnhsnklfqyastdmdkvllkyteynephesrtnadiietlrkkgf >7x3v_ABCDEFGH: title=CRYO-EM STRUCTURE OF IOC3-N2 NUCLEOSOME organism=? DNA sequence DT(J1):DA(I147) DC(J2):DG(I146) DA(J3):DT(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DC(J145):DG(I3) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/kvlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvIrdavtytehakrktvtamdvvyalkrqgrtlygfg/akaKtrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyLtaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/sRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/Ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/Rhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Akaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/sRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7x3v_H:Histone-fold; title=CRYO-EM STRUCTURE OF IOC3-N2 NUCLEOSOME organism=? DNA sequence DT(J1):DA(I147) DC(J2):DG(I146) DA(J3):DT(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DC(J145):DG(I3) chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7x3x_ABCDEFGH: title=CRYO-EM STRUCTURE OF N1 NUCLEOSOME-RA organism=? DNA sequence DT(J1):DA(I147) DC(J2):DG(I146) DA(J3):DT(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J51):DA(I98) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DC(J145):DG(I3) DA(J146):DT(I2) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 5) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/rkvlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akakTrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/srkeSyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/RYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/rhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/sRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7x3x_B:Histone-fold; title=CRYO-EM STRUCTURE OF N1 NUCLEOSOME-RA organism=? DNA sequence DT(J1):DA(I147) DC(J2):DG(I146) DA(J3):DT(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J51):DA(I98) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DC(J145):DG(I3) DA(J146):DT(I2) chainB ( 5) ARG23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rkvlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >7x57_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF HUMAN SUBNUCLEOSOME (CLOSED FORM) organism=? DNA sequence DT(J-59):DA(I59) DG(J-58):DC(I58) DA(J-57):DT(I57) DC(J-56):DG(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DG(J-53):DC(I53) DT(J-52):DA(I52) DG(J-51):DC(I51) DC(J-50):DG(I50) DC(J-49):DG(I49) DT(J-48):DA(I48) DG(J-47):DC(I47) DG(J-46):DC(I46) DA(J-45):DT(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DC(J-42):DG(I42) DT(J-41):DA(I41) DA(J-40):DT(I40) DG(J-39):DC(I39) DG(J-38):DC(I38) DG(J-37):DC(I37) DA(J-36):DT(I36) DG(J-35):DC(I35) DT(J-34):DA(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DT(J-31):DA(I31) DC(J-30):DG(I30) DC(J-29):DG(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DT(J-25):DA(I25) DG(J-24):DC(I24) DG(J-23):DC(I23) DC(J-22):DG(I22) DG(J-21):DC(I21) DG(J-20):DC(I20) DT(J-19):DA(I19) DT(J-18):DA(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DC(J-13):DG(I13) DG(J-12):DC(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DG(J-9):DC(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DA(J-3):DT(I3) DG(J-2):DC(I2) DC(J-1):DG(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DA(J4):DT(I-4) DC(J5):DG(I-5) DG(J6):DC(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DC(J9):DG(I-9) DG(J10):DC(I-10) DT(J11):DA(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DA(J14):DT(I-14) DA(J15):DT(I-15) DG(J16):DC(I-16) DC(J17):DG(I-17) DG(J18):DC(I-18) DG(J19):DC(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DC(J22):DG(I-22) DT(J23):DA(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DT(J29):DA(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DC(J32):DG(I-32) DT(J33):DA(I-33) DA(J34):DT(I-34) DC(J35):DG(I-35) DG(J36):DC(I-36) DA(J37):DT(I-37) DC(J38):DG(I-38) DC(J39):DG(I-39) DA(J40):DT(I-40) DA(J41):DT(I-41) DT(J42):DA(I-42) DT(J43):DA(I-43) DG(J44):DC(I-44) DA(J45):DT(I-45) DG(J46):DC(I-46) DC(J47):DG(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DC(J50):DG(I-50) DC(J51):DG(I-51) DT(J52):DA(I-52) DC(J53):DG(I-53) DG(J54):DC(I-54) DG(J55):DC(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DC(J58):DG(I-58) DC(J59):DG(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) chainA chainB chainC ( 25) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 chainD ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 25) ARG83 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 7) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr/ellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr/ellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdniqgitkpairrlarrggvkriSgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqg/ellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr >7x58_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF HUMAN SUBNUCLEOSOME (OPEN FORM) organism=? DNA sequence DT(J-59):DA(I59) DG(J-58):DC(I58) DA(J-57):DT(I57) DC(J-56):DG(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DG(J-53):DC(I53) DT(J-52):DA(I52) DG(J-51):DC(I51) DC(J-50):DG(I50) DC(J-49):DG(I49) DT(J-48):DA(I48) DG(J-47):DC(I47) DG(J-46):DC(I46) DA(J-45):DT(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DC(J-42):DG(I42) DT(J-41):DA(I41) DA(J-40):DT(I40) DG(J-39):DC(I39) DG(J-38):DC(I38) DG(J-37):DC(I37) DA(J-36):DT(I36) DG(J-35):DC(I35) DT(J-34):DA(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DT(J-31):DA(I31) DC(J-30):DG(I30) DC(J-29):DG(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DT(J-25):DA(I25) DG(J-24):DC(I24) DG(J-23):DC(I23) DC(J-22):DG(I22) DG(J-21):DC(I21) DG(J-20):DC(I20) DT(J-19):DA(I19) DT(J-18):DA(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DC(J-13):DG(I13) DG(J-12):DC(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DG(J-9):DC(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DA(J-3):DT(I3) DG(J-2):DC(I2) DC(J-1):DG(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DA(J4):DT(I-4) DC(J5):DG(I-5) DG(J6):DC(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DC(J9):DG(I-9) DG(J10):DC(I-10) DT(J11):DA(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DA(J14):DT(I-14) DA(J15):DT(I-15) DG(J16):DC(I-16) DC(J17):DG(I-17) DG(J18):DC(I-18) DG(J19):DC(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DC(J22):DG(I-22) DT(J23):DA(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DT(J29):DA(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DC(J32):DG(I-32) DT(J33):DA(I-33) DA(J34):DT(I-34) DC(J35):DG(I-35) DG(J36):DC(I-36) DA(J37):DT(I-37) DC(J38):DG(I-38) DC(J39):DG(I-39) DA(J40):DT(I-40) DA(J41):DT(I-41) DT(J42):DA(I-42) DT(J43):DA(I-43) DG(J44):DC(I-44) DA(J45):DT(I-45) DG(J46):DC(I-46) DC(J47):DG(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DC(J50):DG(I-50) DC(J51):DG(I-51) DT(J52):DA(I-52) DC(J53):DG(I-53) DG(J54):DC(I-54) DG(J55):DC(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DC(J58):DG(I-58) DC(J59):DG(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) chainA ( 5) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 7) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 25) ARG83 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 25) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence elliRklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdniQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr/ellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr/ellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/dniqgitkpairrlarrggvkrisGliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr/ellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr >7x58_D:Histone-fold; title=CRYO-EM STRUCTURE OF HUMAN SUBNUCLEOSOME (OPEN FORM) organism=? DNA sequence DC(I-61):DG(J61) DC(I-60):DG(J60) DG(I-59):DC(J59) DG(I-58):DC(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DC(I-55):DG(J55) DC(I-54):DG(J54) DG(I-53):DC(J53) DA(I-52):DT(J52) DG(I-51):DC(J51) DG(I-50):DC(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DG(I-47):DC(J47) DC(I-46):DG(J46) DT(I-45):DA(J45) DC(I-44):DG(J44) DA(I-43):DT(J43) DA(I-42):DT(J42) DT(I-41):DA(J41) DT(I-40):DA(J40) DG(I-39):DC(J39) DG(I-38):DC(J38) DT(I-37):DA(J37) DC(I-36):DG(J36) DG(I-35):DC(J35) DT(I-34):DA(J34) DA(I-33):DT(J33) DG(I-32):DC(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DA(I-29):DT(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DA(I-23):DT(J23) DG(I-22):DC(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DC(I-19):DG(J19) DC(I-18):DG(J18) DG(I-17):DC(J17) DC(I-16):DG(J16) DT(I-15):DA(J15) DT(I-14):DA(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DA(I-11):DT(J11) DC(I-10):DG(J10) DG(I-9):DC(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DC(I-6):DG(J6) DG(I-5):DC(J5) DT(I-4):DA(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DG(I1):DC(J-1) DC(I2):DG(J-2) DT(I3):DA(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DC(I9):DG(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DC(I12):DG(J-12) DG(I13):DC(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DA(I18):DT(J-18) DA(I19):DT(J-19) DC(I20):DG(J-20) DC(I21):DG(J-21) DG(I22):DC(J-22) DC(I23):DG(J-23) DC(I24):DG(J-24) DA(I25):DT(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DG(I29):DC(J-29) DG(I30):DC(J-30) DA(I31):DT(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DA(I34):DT(J-34) DC(I35):DG(J-35) DT(I36):DA(J-36) DC(I37):DG(J-37) DC(I38):DG(J-38) DC(I39):DG(J-39) DT(I40):DA(J-40) DA(I41):DT(J-41) DG(I42):DC(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DT(I45):DA(J-45) DC(I46):DG(J-46) DC(I47):DG(J-47) DA(I48):DT(J-48) DG(I49):DC(J-49) DG(I50):DC(J-50) DC(I51):DG(J-51) DA(I52):DT(J-52) DC(I53):DG(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DG(I56):DC(J-56) DT(I57):DA(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) chainD ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr >7x5e_AB:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=NRF2-MAFG HETERODIMER BOUND WITH CSMBE1 organism=? DNA sequence DA(D1):DT(C15) DT(D2):DA(C14) DG(D3):DC(C13) DA(D4):DT(C12) DT(D5):DA(C11) DG(D6):DC(C10) DA(D7):DT(C9) DG(D8):DC(C8) DT(D9):DA(C7) DC(D10):DG(C6) DA(D11):DT(C5) DG(D12):DC(C4) DC(D13):DG(C3) DA(D14):DT(C2) DA(D15):DT(C1) chainA ( 35) ARG57 0 0 0 0 0 0 0 0 0 0 0 6 10 10 0 ( 39) ASN61 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 ( 42) TYR64 0 0 0 0 0 0 0 0 0 0 1 4 10 0 0 ( 43) ALA65 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 47) ARG69 0 0 0 0 0 0 9 10 1 0 0 0 0 0 0 chainB ( 55) ASN507 0 0 0 2 8 5 5 0 0 0 0 0 0 0 0 ( 56) LYS508 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 58) ALA510 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 59) ALA511 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 62) CYS514 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence sltdeelvtmsvrelnqhlrglskeeivqlkqrrRtlkNrgYAascRvkrvtqkeelekqkaelqqeveklasenasmkleldalrskyealqtfartv/hltrdelrakalhipfpvekiinlpvvdfnemmskeqfneaqlalirdirrrgkNKvAAqnCrkrkleniveleqdldhlkdekekllkekgendkslhllkkqls >7x5e_E:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=NRF2-MAFG HETERODIMER BOUND WITH CSMBE1 organism=? DNA sequence DT(G1):DA(H15) DT(G2):DA(H14) DG(G3):DC(H13) DC(G4):DG(H12) DT(G5):DA(H11) DG(G6):DC(H10) DA(G7):DT(H9) DC(G8):DG(H8) DT(G9):DA(H7) DC(G10):DG(H6) DA(G11):DT(H5) DT(G12):DA(H4) DC(G13):DG(H3) DA(G14):DT(H2) DT(G15):DA(H1) chainE ( 37) ARG57 0 9 11 4 0 0 0 0 0 0 0 0 0 0 0 ( 41) ASN61 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 ( 44) TYR64 0 0 6 6 1 0 0 0 0 0 0 0 0 0 0 ( 45) ALA65 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 ( 48) CYS68 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 49) ARG69 0 0 0 0 0 0 1 14 14 0 0 0 0 0 0 prot.sequence gtsltdeelvtmsvrelnqhlrglskeeivqlkqrrRtlkNrgYAasCRvkrvtqkeelekqkaelqqeveklasenasmkleldalrskyealqtfartv >7x5e_EF:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=NRF2-MAFG HETERODIMER BOUND WITH CSMBE1 organism=? DNA sequence DA(H1):DT(G15) DT(H2):DA(G14) DG(H3):DC(G13) DA(H4):DT(G12) DT(H5):DA(G11) DG(H6):DC(G10) DA(H7):DT(G9) DG(H8):DC(G8) DT(H9):DA(G7) DC(H10):DG(G6) DA(H11):DT(G5) DG(H12):DC(G4) DC(H13):DG(G3) DA(H14):DT(G2) DA(H15):DT(G1) chainE ( 37) ARG57 0 0 0 0 0 0 0 0 0 0 0 4 11 9 0 ( 41) ASN61 0 0 0 0 0 0 0 0 0 1 3 2 0 0 0 ( 44) TYR64 0 0 0 0 0 0 0 0 0 0 1 6 6 0 0 ( 45) ALA65 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 ( 48) CYS68 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 49) ARG69 0 0 0 0 0 0 14 14 1 0 0 0 0 0 0 chainF ( 49) ARG503 0 13 11 4 0 0 0 0 0 0 0 0 0 0 0 ( 53) ASN507 0 0 0 3 8 5 5 0 0 0 0 0 0 0 0 ( 56) ALA510 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 57) ALA511 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 60) CYS514 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 61) ARG515 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 prot.sequence gtsltdeelvtmsvrelnqhlrglskeeivqlkqrrRtlkNrgYAasCRvkrvtqkeelekqkaelqqeveklasenasmkleldalrskyealqtfartv/trdelrakalhipfpvekiinlpvvdfnemmskeqfneaqlalirdirRrgkNkvAAqnCRkrkleniveleqdldhlkdekekllkekgendkslhllkkqlst >7x5e_F:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=NRF2-MAFG HETERODIMER BOUND WITH CSMBE1 organism=? DNA sequence DA(H1):DT(G15) DT(H2):DA(G14) DG(H3):DC(G13) DA(H4):DT(G12) DT(H5):DA(G11) DG(H6):DC(G10) DA(H7):DT(G9) DG(H8):DC(G8) DT(H9):DA(G7) DC(H10):DG(G6) DA(H11):DT(G5) DG(H12):DC(G4) DC(H13):DG(G3) DA(H14):DT(G2) DA(H15):DT(G1) chainF ( 49) ARG503 0 13 11 4 0 0 0 0 0 0 0 0 0 0 0 ( 53) ASN507 0 0 0 3 8 5 5 0 0 0 0 0 0 0 0 ( 56) ALA510 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 57) ALA511 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 60) CYS514 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 61) ARG515 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 prot.sequence trdelrakalhipfpvekiinlpvvdfnemmskeqfneaqlalirdirRrgkNkvAAqnCRkrkleniveleqdldhlkdekekllkekgendkslhllkkqlst >7x5f_AB:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=NRF2-MAFG HETERODIMER BOUND WITH CSMBE2 organism=? DNA sequence DA(D1):DT(C15) DC(D2):DG(C14) DA(D3):DT(C13) DG(D4):DC(C12) DT(D5):DA(C11) DG(D6):DC(C10) DA(D7):DT(C9) DC(D8):DG(C8) DT(D9):DA(C7) DC(D10):DG(C6) DA(D11):DT(C5) DG(D12):DC(C4) DC(D13):DG(C3) DA(D14):DT(C2) DG(D15):DC(C1) chainA ( 35) ARG57 0 0 0 0 0 0 0 0 0 0 0 7 14 10 0 ( 39) ASN61 0 0 0 0 0 0 0 0 0 2 1 5 0 0 0 ( 42) TYR64 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 ( 43) ALA65 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 47) ARG69 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 chainB ( 54) ASN507 0 0 0 2 9 5 3 0 0 0 0 0 0 0 0 ( 57) ALA510 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 58) ALA511 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 61) CYS514 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 62) ARG515 0 0 0 0 0 0 2 11 15 0 0 0 0 0 0 prot.sequence sltdeelvtmsvrelnqhlrglskeeivqlkqrrRtlkNrgYAascRvkrvtqkeelekqkaelqqeveklasenasmkleldalrskyealqtfartva/ltrdelrakalhipfpvekiinlpvvdfnemmskeqfneaqlalirdirrrgkNkvAAqnCRkrkleniveleqdldhlkdekekllkekgendkslhllkkqls >7x5f_E:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=NRF2-MAFG HETERODIMER BOUND WITH CSMBE2 organism=? DNA sequence DA(H1):DT(G15) DC(H2):DG(G14) DA(H3):DT(G13) DG(H4):DC(G12) DT(H5):DA(G11) DG(H6):DC(G10) DA(H7):DT(G9) DC(H8):DG(G8) DT(H9):DA(G7) DC(H10):DG(G6) DA(H11):DT(G5) DG(H12):DC(G4) DC(H13):DG(G3) DA(H14):DT(G2) DG(H15):DC(G1) chainE ( 31) ARG57 0 0 0 0 0 0 0 0 0 0 0 5 13 9 0 ( 35) ASN61 0 0 0 0 0 0 0 0 0 4 3 4 0 0 0 ( 38) TYR64 0 0 0 0 0 0 0 0 0 0 1 6 10 0 0 ( 39) ALA65 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 42) CYS68 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 43) ARG69 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 prot.sequence eelvtmsvrelnqhlrglskeeivqlkqrrRtlkNrgYAasCRvkrvtqkeelekqkaelqqeveklasenasmkleldalrskyealqtfartv >7x5f_EF:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=NRF2-MAFG HETERODIMER BOUND WITH CSMBE2 organism=? DNA sequence DC(G1):DG(H15) DT(G2):DA(H14) DG(G3):DC(H13) DC(G4):DG(H12) DT(G5):DA(H11) DG(G6):DC(H10) DA(G7):DT(H9) DG(G8):DC(H8) DT(G9):DA(H7) DC(G10):DG(H6) DA(G11):DT(H5) DC(G12):DG(H4) DT(G13):DA(H3) DG(G14):DC(H2) DT(G15):DA(H1) chainE ( 31) ARG57 0 9 13 5 0 0 0 0 0 0 0 0 0 0 0 ( 35) ASN61 0 0 0 4 3 4 0 0 0 0 0 0 0 0 0 ( 38) TYR64 0 0 10 6 1 0 0 0 0 0 0 0 0 0 0 ( 39) ALA65 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 42) CYS68 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 43) ARG69 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 chainF ( 55) ASN507 0 0 0 0 0 0 0 0 5 7 9 0 0 0 0 ( 58) ALA510 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 ( 59) ALA511 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 62) CYS514 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 63) ARG515 0 0 0 0 0 0 18 13 2 0 0 0 0 0 0 prot.sequence eelvtmsvrelnqhlrglskeeivqlkqrrRtlkNrgYAasCRvkrvtqkeelekqkaelqqeveklasenasmkleldalrskyealqtfartv/hltrdelrakalhipfpvekiinlpvvdfnemmskeqfneaqlalirdirrrgkNkvAAqnCRkrkleniveleqdldhlkdekekllkekgendkslhllkkqls >7x5g_AB:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=NRF2 (A510Y)-MAFG HETERODIMER BOUND WITH CSMBE2 organism=? DNA sequence DA(D1):DT(C15) DC(D2):DG(C14) DA(D3):DT(C13) DG(D4):DC(C12) DT(D5):DA(C11) DG(D6):DC(C10) DA(D7):DT(C9) DC(D8):DG(C8) DT(D9):DA(C7) DC(D10):DG(C6) DA(D11):DT(C5) DG(D12):DC(C4) DC(D13):DG(C3) DA(D14):DT(C2) DG(D15):DC(C1) chainA ( 34) ARG57 0 0 0 0 0 0 0 0 0 0 0 6 10 10 0 ( 38) ASN61 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 ( 41) TYR64 0 0 0 0 0 0 0 0 0 0 1 8 6 0 0 ( 42) ALA65 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 46) ARG69 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 chainB ( 54) ASN507 0 0 0 4 9 6 5 0 0 0 0 0 0 0 0 ( 57) TYR510 0 0 6 7 1 0 0 0 0 0 0 0 0 0 0 ( 58) ALA511 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 ( 62) ARG515 0 0 0 0 0 0 2 11 15 0 0 0 0 0 0 prot.sequence ltdeelvtmsvrelnqhlrglskeeivqlkqrrRtlkNrgYAascRvkrvtqkeelekqkaelqqeveklasenasmkleldalrskyealqtfartva/ltrdelrakalhipfpvekiinlpvvdfnemmskeqfneaqlalirdirrrgkNkvYAqncRkrkleniveleqdldhlkdekekllkekgendkslhllkkqls >7x5g_E:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=NRF2 (A510Y)-MAFG HETERODIMER BOUND WITH CSMBE2 organism=? DNA sequence DC(G1):DG(H15) DT(G2):DA(H14) DG(G3):DC(H13) DC(G4):DG(H12) DT(G5):DA(H11) DG(G6):DC(H10) DA(G7):DT(H9) DG(G8):DC(H8) DT(G9):DA(H7) DC(G10):DG(H6) DA(G11):DT(H5) DC(G12):DG(H4) DT(G13):DA(H3) DG(G14):DC(H2) DT(G15):DA(H1) chainE ( 31) ARG57 0 13 14 6 0 0 0 0 0 0 0 0 0 0 0 ( 35) ASN61 0 0 0 3 4 2 0 0 0 0 0 0 0 0 0 ( 38) TYR64 0 0 7 8 1 0 0 0 0 0 0 0 0 0 0 ( 39) ALA65 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 ( 42) CYS68 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 43) ARG69 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 prot.sequence eelvtmsvrelnqhlrglskeeivqlkqrrRtlkNrgYAasCRvkrvtqkeelekqkaelqqeveklasenasmkleldalrskyealqtfartv >7x5g_EF:A_DNA-binding_domain_in_eukaryotic_transcription_factors;Leucine_zipper_domain; title=NRF2 (A510Y)-MAFG HETERODIMER BOUND WITH CSMBE2 organism=? DNA sequence DC(G1):DG(H15) DT(G2):DA(H14) DG(G3):DC(H13) DC(G4):DG(H12) DT(G5):DA(H11) DG(G6):DC(H10) DA(G7):DT(H9) DG(G8):DC(H8) DT(G9):DA(H7) DC(G10):DG(H6) DA(G11):DT(H5) DC(G12):DG(H4) DT(G13):DA(H3) DG(G14):DC(H2) DT(G15):DA(H1) chainE ( 31) ARG57 0 13 14 6 0 0 0 0 0 0 0 0 0 0 0 ( 35) ASN61 0 0 0 3 4 2 0 0 0 0 0 0 0 0 0 ( 38) TYR64 0 0 7 8 1 0 0 0 0 0 0 0 0 0 0 ( 39) ALA65 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 ( 42) CYS68 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 43) ARG69 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 chainF ( 53) ASN507 0 0 0 0 0 0 0 0 4 5 6 5 0 0 0 ( 54) LYS508 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 56) TYR510 0 0 0 0 0 0 0 0 0 0 1 4 6 0 0 ( 57) ALA511 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 ( 61) ARG515 0 0 0 0 0 0 17 14 3 0 0 0 0 0 0 prot.sequence eelvtmsvrelnqhlrglskeeivqlkqrrRtlkNrgYAasCRvkrvtqkeelekqkaelqqeveklasenasmkleldalrskyealqtfartv/trdelrakalhipfpvekiinlpvvdfnemmskeqfneaqlalirdirrrgkNKvYAqncRkrkleniveleqdldhlkdekekllkekgendkslhllkkqls >7x5k_ADFKLNOP:Toll/Interleukin_receptor_TIR_domain; title=TIR-DSDNA COMPLEX, THE INITIAL BINDING STATE organism=LINUM USITATISSIMUM DNA sequence DT(B2):DA(E44) DT(B3):DA(E43) DA(B4):DT(E42) DA(B5):DT(E41) DT(B6):DA(E40) DT(B7):DA(E39) DA(B8):DT(E38) DA(B9):DT(E37) DT(B10):DA(E36) DT(B11):DA(E35) DA(B12):DT(E34) DT(B13):DA(E33) DA(B14):DT(E32) DA(B15):DT(E31) DT(B16):DA(E30) DT(B17):DA(E29) DA(B18):DT(E28) DA(B19):DT(E27) DT(B20):DA(E26) DT(B21):DA(E25) DA(B22):DT(E24) DT(B23):DA(E23) DT(B24):DA(E22) DA(B25):DT(E21) DA(B26):DT(E20) DT(B27):DA(E19) DT(B28):DA(E18) DA(B29):DT(E17) DA(B30):DT(E16) DT(B31):DA(E15) DT(B32):DA(E14) DA(B33):DT(E13) DT(B34):DA(E12) DT(B35):DA(E11) DA(B36):DT(E10) DA(B37):DT(E9) DT(B38):DA(E8) DT(B39):DA(E7) DA(B40):DT(E6) DA(B41):DT(E5) DT(B42):DA(E4) DT(B43):DA(E3) DA(B44):DT(E2) chainA (114) LYS172 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) LYS176 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (114) LYS172 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (117) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 (118) LYS176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainP (117) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) LYS176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN (117) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK (117) ARG175 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO (117) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 chainL (114) LYS172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (117) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykKafRKhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske/veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykKafrkhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske/veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykkafRKhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske/veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykkafRkhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske/veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykKafRkhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske/veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykkafRkhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske/veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykkafRkhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske/veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykkafRKhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske >7x5k_CGIJRT:Toll/Interleukin_receptor_TIR_domain; title=TIR-DSDNA COMPLEX, THE INITIAL BINDING STATE organism=LINUM USITATISSIMUM DNA sequence DT(S2):DA(Q44) DA(S3):DT(Q43) DA(S4):DT(Q42) DT(S5):DA(Q41) DT(S6):DA(Q40) DA(S7):DT(Q39) DA(S8):DT(Q38) DT(S9):DA(Q37) DT(S10):DA(Q36) DA(S11):DT(Q35) DA(S12):DT(Q34) DT(S13):DA(Q33) DA(S14):DT(Q32) DA(S15):DT(Q31) DT(S16):DA(Q30) DT(S17):DA(Q29) DA(S18):DT(Q28) DA(S19):DT(Q27) DT(S20):DA(Q26) DT(S21):DA(Q25) DA(S22):DT(Q24) DA(S23):DT(Q23) DT(S24):DA(Q22) DA(S25):DT(Q21) DA(S26):DT(Q20) DT(S27):DA(Q19) DT(S28):DA(Q18) DA(S29):DT(Q17) DA(S30):DT(Q16) DT(S31):DA(Q15) DT(S32):DA(Q14) DA(S33):DT(Q13) DT(S34):DA(Q12) DA(S35):DT(Q11) DA(S36):DT(Q10) DT(S37):DA(Q9) DT(S38):DA(Q8) DA(S39):DT(Q7) DA(S40):DT(Q6) DT(S41):DA(Q5) DT(S42):DA(Q4) DA(S43):DT(Q3) DA(S44):DT(Q2) chainC (117) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (117) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 chainJ (114) LYS172 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (114) LYS172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) LYS176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR (114) LYS172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (117) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (114) LYS172 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ARG175 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) LYS176 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykkafRkhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske/veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykKafRKhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske/veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykkafRkhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske/veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykKafRkhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske/veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykKafRkhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske/veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykKafRKhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske >7x5k_HM:Toll/Interleukin_receptor_TIR_domain; title=TIR-DSDNA COMPLEX, THE INITIAL BINDING STATE organism=LINUM USITATISSIMUM DNA sequence DT(Q43) DT(Q42) DA(Q41) DA(Q40) DT(Q39) DT(Q38) DA(Q37) DA(Q36) DT(Q35) DT(Q34) DA(Q33) DT(Q32) DT(Q31) DA(Q30) DA(Q29) DT(Q28) DT(Q27) DA(Q26) DA(Q25) DT(Q24) DT(Q23) DT(Q2) DT(Q3) DA(Q4) DA(Q5) DT(Q6) DT(Q7) DA(Q8) DA(Q9) DT(Q10) DT(Q11) DA(Q12) DT(Q13) DA(Q14) DA(Q15) DT(Q16) DT(Q17) DA(Q18) DA(Q19) DT(Q20) DT(Q21) DA(Q22):DT(Q23) chainM (117) ARG175 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykkafrkhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske/veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykkafRkhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske >7x5k_L:Toll/Interleukin_receptor_TIR_domain; title=TIR-DSDNA COMPLEX, THE INITIAL BINDING STATE organism=? DNA sequence DT(E2):DA(B44) DA(E3):DT(B43) DA(E4):DT(B42) DT(E5):DA(B41) DT(E6):DA(B40) DA(E7):DT(B39) DA(E8):DT(B38) DT(E9):DA(B37) DT(E10):DA(B36) DA(E11):DT(B35) DA(E12):DT(B34) DT(E13):DA(B33) DA(E14):DT(B32) DA(E15):DT(B31) DT(E16):DA(B30) DT(E17):DA(B29) DA(E18):DT(B28) DA(E19):DT(B27) DT(E20):DA(B26) DT(E21):DA(B25) DA(E22):DT(B24) DA(E23):DT(B23) DT(E24):DA(B22) DA(E25):DT(B21) DA(E26):DT(B20) DT(E27):DA(B19) DT(E28):DA(B18) DA(E29):DT(B17) DA(E30):DT(B16) DT(E31):DA(B15) DT(E32):DA(B14) DA(E33):DT(B13) DT(E34):DA(B12) DA(E35):DT(B11) DA(E36):DT(B10) DT(E37):DA(B9) DT(E38):DA(B8) DA(E39):DT(B7) DA(E40):DT(B6) DT(E41):DA(B5) DT(E42):DA(B4) DA(E43):DT(B3) DA(E44):DT(B2) chainL (114) LYS172 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence veydvflsfrgpdtrkqftdflyhflcyykihtfrdddelrkgkeigpnllraidqskiyvpiissgyadskwclmelaeivrrqeedprriilpifymvdpsdvrhqtgcykKafRkhankfdgqtiqnwkdalkkvgdlkgwhigkddeqgaiadkvsadiwshiske >7x74_CDFGHMN:"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF STREPTOMYCES COELICOLOR TRANSCRIPTION INITIAL COMPLEX WITH TWO ZUR DIMERS organism=? DNA sequence DG(P1):DC(O84) DG(P2):DC(O83) DC(P3):DG(O82) DG(P4):DC(O81) DA(P5):DT(O80) DC(P6):DG(O79) DC(P7):DG(O78) DC(P8):DG(O77) DG(P9):DC(O76) DG(P10):DC(O75) DC(P11):DG(O74) DG(P12):DC(O73) DC(P13):DG(O72) DC(P14):DG(O71) DG(P15):DG(O70) DC(P16):DC(O69) DC(P17):DC(O68) DT(P18):DT(O67) DA(P19):DA(O66) DC(P20):DC(O65) DG(P21):DG(O64) DG(P22):DG(O63) DT(P23):DT(O62) DC(P24):DC(O61) DA(P25):DA(O60) DG(P26):DG(O59) DT(P27):DT(O58) DA(P28):DT(O57) DC(P29):DG(O56) DT(P30):DA(O55) DA(P31):DT(O54) DC(P32):DG(O53) DG(P33):DC(O52) DG(P34):DC(O51) DG(P35):DC(O50) DT(P36):DA(O49) DA(P37):DT(O48) DG(P38):DC(O47) DG(P39):DC(O46) DG(P40):DC(O45) DG(P41):DC(O44) DG(P42):DC(O43) DT(P43):DA(O42) DA(P44):DT(O41) DT(P45):DA(O40) DC(P46):DG(O39) DG(P47):DC(O38) DG(P48):DC(O37) DG(P49):DC(O36) DC(P50):DG(O35) DA(P51):DT(O34) DA(P52):DT(O33) DC(P53):DG(O32) DG(P54):DC(O31) DC(P55):DG(O30) DG(P56):DC(O29) DG(P57):DC(O28) DC(P58):DG(O27) DA(P59):DT(O26) DC(P60):DG(O25) DT(P61):DA(O24) DA(P63):DT(O22) DA(P64):DT(O21) DC(P65):DG(O20) DA(P66):DT(O19) DC(P67):DG(O18) DC(P68):DG(O17) DG(P69):DC(O16) DT(P70):DA(O15) DG(P72):DC(O13) DT(P73):DA(O12) DC(P74):DG(O11) DA(P75):DT(O10) DT(P76):DA(O9) DG(P77):DC(O8) DT(P78):DA(O7) DG(P79):DC(O6) DC(P80):DG(O5) DC(P81):DG(O4) DT(P82):DA(O3) DT(P83):DA(O2) DG(P84):DC(O1) chainC (154) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) LYS191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ILE193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ALA198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 prot.sequence astaplrisfakikeplevpnllalqtesfdwllgndawkarvesalesgqdvptksgleeifeeispiedfsgsmsltfrdhrfeppknsideckdrdftyaaplfvtaeftnnetgeiksqtvfmgdfplmtnkgtfvingtervvvsqlvRspgvyfdssidktsdkdifsaKiIpsrgAWlEmeidkrdmvgvriDrkrkqsvtvllkalgwtteqileefgeyesmratlekdhtqgqddalldiyrklRpgepptreaaqtllenlyfnpkRydlakvgrykvnkklgadepldagvlttddviatikylvklhagetetvgesgreivvetddIdhfgnRrirnvgeliqnqvrtglaRmeRVvrErmttqdveaitpqtlinirPvvasikEffgTsqlsqfmdqnnplsglthkrrlnalgpggLsrERagfeVrdvhpshygrmcpietpegpnigligslasygrinpfgfietpyrkvvegqvtddvdyltadeedrfviaqanaalgddmrfaearvlvrrrggevdyvpgddvdymdvsprqmvsvatamipflehddanralmganmmrqavpliksesplvgtgmeyrsaadagdvvkaekagvvqevsadyitttnddgtyityrlakfsrsnqgtsvnqkvivaegdriiegqvladgpatengemalgknllvafmpweghnyedaiilsqrlvqddvlssihieehevdardtklgpeeitrdipnvseevladldergiirigaevvagdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgeigkvigvrvfdreegdelppgvnqlvrvyvaqkrkitdgdklagrhgnkgviskinpiedmpfledgtpvdiilnplavpsrmnpgqvleihlgwlasrgwdvsglaeewaqrlqvigadkvepgtnvatpvfdgaredelagllqhtipnrdgermvlpsgkarlfdgrsgepfpepisvgymyilklhhlvddklharstgpysmitqqplggkaqfggqrfgemevwaleaygaayalqelltiksddvtgrvkvyeaivkgenipepgipesfkvlikemqslclnvevlssdgmsie/fdelriglataddirqwshgevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekviyfaaymitfvdeerrtrdlpsleahvsverqqieqrrdsdlearakkletdlaeleaegakadvrrkvregaeremkqlrdraqreidrldevwnrfknlkvqdlegdellyrelrdrfgtyfdgsmgaaalqkrlesfdldeeaerlreiirtgkgqkktralkrlkvvsaflqtsnspkgmvldcvpvippdlrpmvqldggrfatsdlndlyrrvinrnnrlkrlldlgapeiivnnekrmlqeavdalfdngrrgrpvtgpgnrplkslsdmlkgkqgrfrqnllgkrvdysarsvivvgpqlklhqcglpkamalelfkpfvmkrlvdlnhaqniksakrmvergrtvvydvleeviaehpvllnrAptlhrlgiqafepqlvegkaiqihplvctafnadfdgdqmavhlplsaeaqaearilmlssnnilkpadgrpvtmptqdmvlglfflttdsegrspkgegrafgssaeaimafdagdltlqakidirfpvgtipprgfeppareegepewqqgdtftlkttlgralfnellpedypfvdyevgkkqlseivndlaerypkvivaatldnlkaagffwatrsgvtvaisdivvpdakkeivkgyegqdekvqkqyerglitkeertqeliaiwtkatnevaeamndnfpktnpvsmmvnsgargnmmqmrqiagmrglvsnaknetiprpikasfreglsvleyfisthgarkgladtalrTAdsgyltrrlvdvsqdviireedcgterglklpiatrdadgtlrkaedvetsvyarmlaedvvidgkviapanvdlgdvlidalvahgveevktrsiltcesqvgtcamcygrslatgklvdigeavgiiaaqsigepgtqltmrtfhtggvagdditqglprvvelfeartpkgvapiseasgrvrieetektkkivvtpddgsdetafpiskrarllvgegdhvevgqkltvgatnphdvlrilgqravqvhlvgevqkvynsqgvsihdkhieiiirqmlrrvtiiesgdaellpgelvertkfetenrrvvqegghpasgrpqlmgitkaslateswlsaasfqettrvltdaainaksdsliglkenviigklipagtglsryrnirvepteeakaam/dpVKdyLkqIgKvpLLnaeqevelakrieaglfaedklansdklapklkreleiiaedgrraknhlleaNlRLvvslakRYtgRgmlFldliqegnlgliravekfdytKgYkfSTyaTWwiRQaiTramadqartiripVHmvevinklarvqrqmlqdlgreptpeelakeldmtpekvievqkygrepislhtpLgEdgdsefgdLiedseavvpadavsftllqeqlhsvldtlsereagvvsmrfgltdgqpktlDeigkvygvTRERiRqiesktmsklrhpsrsqvlrdyl/ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTtvyRtlqsladagevdvlrtaEgEsvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgratrqraavsaalqeveefrsaQelhdmlkhkgdavglTTvYrtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgratrqraavsaalqeveefrsaqelhdmlkhkgdavglTtvyRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvyRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga >7x74_H:"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF STREPTOMYCES COELICOLOR TRANSCRIPTION INITIAL COMPLEX WITH TWO ZUR DIMERS organism=? DNA sequence DC(O1):DG(P84) DA(O2):DT(P83) DA(O3):DT(P82) DG(O4):DC(P81) DG(O5):DC(P80) DC(O6):DG(P79) DA(O7):DT(P78) DC(O8):DG(P77) DA(O9):DT(P76) DT(O10):DA(P75) DG(O11):DC(P74) DA(O12):DT(P73) DC(O13):DG(P72) DA(O15):DT(P70) DC(O16):DG(P69) DG(O17):DC(P68) DG(O18):DC(P67) DT(O19):DA(P66) DG(O20):DC(P65) DT(O21):DA(P64) DT(O22):DA(P63) DA(O24):DT(P61) DG(O25):DC(P60) DT(O26):DA(P59) DG(O27):DC(P58) DC(O28):DG(P57) DC(O29):DG(P56) DG(O30):DC(P55) DC(O31):DG(P54) DG(O32):DC(P53) DT(O33):DA(P52) DT(O34):DA(P51) DG(O35):DC(P50) DC(O36):DG(P49) DC(O37):DG(P48) DC(O38):DG(P47) DG(O39):DC(P46) DA(O40):DT(P45) DT(O41):DA(P44) DA(O42):DT(P43) DC(O43):DG(P42) DC(O44):DG(P41) DC(O45):DG(P40) DC(O46):DG(P39) DC(O47):DG(P38) DT(O48):DA(P37) DA(O49):DT(P36) DC(O50):DG(P35) DC(O51):DG(P34) DC(O52):DG(P33) DG(O53):DC(P32) DT(O54):DA(P31) DA(O55):DT(P30) DG(O56):DC(P29) DT(O57):DA(P28) DT(O58):DT(P27) DG(O59):DG(P26) DA(O60):DA(P25) DC(O61):DC(P24) DT(O62):DT(P23) DG(O63):DG(P22) DG(O64):DG(P21) DC(O65):DC(P20) DA(O66):DA(P19) DT(O67):DT(P18) DC(O68):DC(P17) DC(O69):DC(P16) DG(O70):DG(P15) DG(O71):DC(P14) DG(O72):DC(P13) DC(O73):DG(P12) DG(O74):DC(P11) DC(O75):DG(P10) DC(O76):DG(P9) DG(O77):DC(P8) DG(O78):DC(P7) DG(O79):DC(P6) DT(O80):DA(P5) DC(O81):DG(P4) DG(O82):DC(P3) DC(O83):DG(P2) DC(O84):DG(P1) chainH ( 28) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ppvkgratrqraavsaalqeveefrsaQelhdmlkhkgdavglTTvYrtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga >7x75_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF STREPTOMYCES COELICOLOR RNAP-PROMOTER OPEN COMPLEX WITH THREE ZUR DIMERS organism=? DNA sequence DC(O1):DG(P84) DA(O2):DT(P83) DA(O3):DT(P82) DG(O4):DC(P81) DG(O5):DC(P80) DC(O6):DG(P79) DA(O7):DT(P78) DC(O8):DG(P77) DA(O9):DT(P76) DT(O10):DA(P75) DG(O11):DC(P74) DA(O12):DT(P73) DC(O13):DG(P72) DA(O15):DT(P70) DC(O16):DG(P69) DG(O17):DC(P68) DG(O18):DC(P67) DT(O19):DA(P66) DG(O20):DC(P65) DT(O21):DA(P64) DT(O22):DA(P63) DC(O23):DG(P62) DA(O24):DT(P61) DG(O25):DC(P60) DT(O26):DA(P59) DG(O27):DC(P58) DC(O28):DG(P57) DC(O29):DG(P56) DG(O30):DC(P55) DC(O31):DG(P54) DG(O32):DC(P53) DT(O33):DA(P52) DT(O34):DA(P51) DG(O35):DC(P50) DC(O36):DG(P49) DC(O37):DG(P48) DC(O38):DG(P47) DG(O39):DC(P46) DA(O40):DT(P45) DT(O41):DA(P44) DA(O42):DT(P43) DC(O43):DG(P42) DC(O44):DG(P41) DC(O45):DG(P40) DC(O46):DG(P39) DC(O47):DG(P38) DT(O48):DA(P37) DA(O49):DT(P36) DC(O50):DG(P35) DC(O51):DG(P34) DC(O52):DG(P33) DG(O53):DC(P32) DT(O54):DA(P31) DA(O55):DT(P30) DG(O56):DC(P29) DT(O57):DA(P28) DT(O58):DA(P27) DG(O59):DC(P26) DA(O60):DT(P25) DC(O61):DG(P24) DT(O62):DA(P23) DG(O63):DG(P22) DG(O64):DG(P21) DC(O65):DC(P20) DA(O66):DA(P19) DT(O67):DT(P18) DC(O68):DC(P17) DC(O69):DG(P16) DG(O70):DC(P15) DG(O71):DC(P14) DG(O72):DC(P13) DC(O73):DG(P12) DG(O74):DC(P11) DC(O75):DG(P10) DC(O76):DG(P9) DG(O77):DC(P8) DG(O78):DC(P7) DG(O79):DC(P6) DT(O80):DA(P5) DC(O81):DG(P4) DG(O82):DC(P3) DC(O83):DG(P2) DC(O84):DG(P1) chainC (146) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ILE193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) PRO194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TRP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) GLU201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ASP215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ILE356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) ARG381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) PRO408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ALA411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) LYS414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) GLU415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) THR419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (408) SER423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (409) GLN424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (410) PHE425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) GLU452 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG453 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) VAL458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1041) MET1056 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence astaplrisfakikeplevpnllalqtesfdwllgndawkarvesalesgqdvptksgleeifeeispiedfsgsmsltfrdhrfeppknsideckdrdftyaaplfvtaeftnnetgeiksqtvfmgdfplmtnkgtfvingteRvvvsqlvRspgvyfdssidktsdkdifsakiIPsrgaWlEmeidkrdmvgvriDrkrkqsvtvllkalgwtteqileefgeyesmratlekdhtqgqddalldiyrklrpgepptreaaqtllenlyfnpkRydlakvgrykvnkklgadepldagvlttddviatikylvklhagetetvgesgreivvetddIdhfgnRrirnvgeliqnqvrtglaRmeRvvrErmttqdveaitpqtliniRPvvAsiKEffgTsqlSQFmdqnnplsglthkrrlnalgpggLsrERagfeVrdvhpshygrmcpietpegpnigligslasygrinpfgfietpyrkvvegqvtddvdyltadeedrfviaqanaalgddmrfaearvlvrrrggevdyvpgddvdymdvsprqmvsvatamipflehddanralmganmmrqavpliksesplvgtgmeyrsaadagdvvkaekagvvqevsadyitttnddgtyityrlakfsrsnqgtsvnqkvivaegdriiegqvladgpatengemalgknllvafmpweghnyedaiilsqrlvqddvlssihieehevdardtklgpeeitrdipnvseevladldergiirigaevvagdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgeigkvigvrvfdreegdelppgvnqlvrvyvaqkrkitdgdklagrhgnkgviskinpiedmpfledgtpvdiilnplavpsrmnpgqvleihlgwlasrgwdvsglaeewaqrlqvigadkvepgtnvatpvfdgaredelagllqhtipnrdgermvlpsgkarlfdgrsgepfpepisvgymyilklhhlvddklharstgpysmitqqplggkaqfggqrfgeMevwaleaygaayalqelltiksddvtgrvkvyeaivkgenipepgipesfkvlikemqslclnvevlssdgmsie >7x76_CDFGHMN:"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF STREPTOMYCES COELICOLOR RNAP-PROMOTER OPEN COMPLEX WITH TWO ZUR DIMERS organism=? DNA sequence DG(P1):DC(O84) DG(P2):DC(O83) DC(P3):DG(O82) DG(P4):DC(O81) DA(P5):DT(O80) DC(P6):DG(O79) DC(P7):DG(O78) DC(P8):DG(O77) DG(P9):DC(O76) DG(P10):DC(O75) DC(P11):DG(O74) DG(P12):DC(O73) DC(P13):DG(O72) DC(P14):DG(O71) DC(P15):DG(O70) DG(P16):DC(O69) DC(P17):DC(O68) DT(P18):DT(O67) DA(P19):DA(O66) DC(P20):DC(O65) DG(P21):DG(O64) DG(P22):DG(O63) DA(P23):DT(O62) DG(P24):DC(O61) DT(P25):DA(O60) DC(P26):DG(O59) DA(P27):DT(O58) DA(P28):DT(O57) DC(P29):DG(O56) DT(P30):DA(O55) DA(P31):DT(O54) DC(P32):DG(O53) DG(P33):DC(O52) DG(P34):DC(O51) DG(P35):DC(O50) DT(P36):DA(O49) DA(P37):DT(O48) DG(P38):DC(O47) DG(P39):DC(O46) DG(P40):DC(O45) DG(P41):DC(O44) DG(P42):DC(O43) DT(P43):DA(O42) DA(P44):DT(O41) DT(P45):DA(O40) DC(P46):DG(O39) DG(P47):DC(O38) DG(P48):DC(O37) DG(P49):DC(O36) DC(P50):DG(O35) DA(P51):DT(O34) DA(P52):DT(O33) DC(P53):DG(O32) DG(P54):DC(O31) DC(P55):DG(O30) DG(P56):DC(O29) DG(P57):DC(O28) DC(P58):DG(O27) DA(P59):DT(O26) DC(P60):DG(O25) DT(P61):DA(O24) DG(P62):DC(O23) DA(P63):DT(O22) DA(P64):DT(O21) DC(P65):DG(O20) DA(P66):DT(O19) DC(P67):DG(O18) DC(P68):DG(O17) DG(P69):DC(O16) DT(P70):DA(O15) DG(P72):DC(O13) DT(P73):DA(O12) DC(P74):DG(O11) DA(P75):DT(O10) DT(P76):DA(O9) DG(P77):DC(O8) DT(P78):DA(O7) DG(P79):DC(O6) DC(P80):DG(O5) DC(P81):DG(O4) DT(P82):DA(O3) DT(P83):DA(O2) DG(P84):DC(O1) chainC (146) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ILE193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) PRO194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) TRP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) GLU201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ILE356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) ARG381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (373) GLU388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) PRO408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) GLU415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) THR419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (409) GLN424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (410) PHE425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) GLU452 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG453 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) VAL458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (383) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) ARG427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) ALA501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (496) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (534) GLN540 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (856) THR862 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 6) VAL215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LYS216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) LEU219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) ILE222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LYS224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ASN282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LEU285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) TYR293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) THR294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) PHE300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) LYS322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) TYR324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) SER327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) THR328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) TYR329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) THR331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) TRP332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) TRP333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) GLN336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) THR339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) VAL353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) HIS354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLU357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) GLU412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) ASP415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (274) ARG483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 15 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) GLU484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 20 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) ARG485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) GLN488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LEU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 48) ARG53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 prot.sequence astaplrisfakikeplevpnllalqtesfdwllgndawkarvesalesgqdvptksgleeifeeispiedfsgsmsltfrdhrfeppknsideckdrdftyaaplfvtaeftnnetgeiksqtvfmgdfplmtnkgtfvingteRvvvsqlvRspgvyfdssidktsdkdifsakiIPsrgaWlEmeidkrdmvgvridrkrkqsvtvllkalgwtteqileefgeyesmratlekdhtqgqddalldiyrklrpgepptreaaqtllenlyfnpkRydlakvgrykvnkklgadepldagvlttddviatikylvklhagetetvgesgreivvetddIdhfgnRrirnvgeliqnqvrtglaRmervvrErmttqdveaitpqtliniRPvvasikEffgTsqlsQFmdqnnplsglthkrrlnalgpggLsrERagfeVrdvhpshygrmcpietpegpnigligslasygrinpfgfietpyrkvvegqvtddvdyltadeedrfviaqanaalgddmrfaearvlvrrrggevdyvpgddvdymdvsprqmvsvatamipflehddanralmganmmrqavpliksesplvgtgmeyrsaadagdvvkaekagvvqevsadyitttnddgtyityrlakfsrsnqgtsvnqkvivaegdriiegqvladgpatengemalgknllvafmpweghnyedaiilsqrlvqddvlssihieehevdardtklgpeeitrdipnvseevladldergiirigaevvagdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgeigkvigvrvfdreegdelppgvnqlvrvyvaqkrkitdgdklagrhgnkgviskinpiedmpfledgtpvdiilnplavpsrmnpgqvleihlgwlasrgwdvsglaeewaqrlqvigadkvepgtnvatpvfdgaredelagllqhtipnrdgermvlpsgkarlfdgrsgepfpepisvgymyilklhhlvddklharstgpysmitqqplggkaqfggqrfgemevwaleaygaayalqelltiksddvtgrvkvyeaivkgenipepgipesfkvlikemqslclnvevlssdgmsie/fdelriglataddirqwshgevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekviyfaaymitfvdeerrtrdlpsleahvsverqqieqrrdsdlearakkletdlaeleaegakadvrrkvregaeremkqlrdraqreidrldevwnrfknlkvqdlegdellyrelrdrfgtyfdgsmgaaalqkrlesfdldeeaerlreiirtgkgqkktralkrlkvvsaflqtsnspkgmvldcvpvippdlrpmvqldggrfatsdlndlyrrvinrnnrlkrlldlgapeiivnnekrmlqeavdalfdngrrgRpvtgpgnrplkslsdmlkgkqgrfrqnllgkrvdysaRsvivvgpqlklhqcglpkamalelfkpfvmkrlvdlnhaqniksakrmvergrtvvydvleeviaehpvllnrAPtlhrlgiqafepqlvegkaiqihplvctafnadfdgdQmavhlplsaeaqaearilmlssnnilkpadgrpvtmptqdmvlglfflttdsegrspkgegrafgssaeaimafdagdltlqakidirfpvgtipprgfeppareegepewqqgdtftlkttlgralfnellpedypfvdyevgkkqlseivndlaerypkvivaatldnlkaagffwatrsgvtvaisdivvpdakkeivkgyegqdekvqkqyerglitkeertqeliaiwtkatnevaeamndnfpktnpvsmmvnsgargnmmqmrqiagmrglvsnaknetiprpikasfreglsvleyfisthgarkgladtalrTadsgyltrrlvdvsqdviireedcgterglklpiatrdadgtlrkaedvetsvyarmlaedvvidgkviapanvdlgdvlidalvahgveevktrsiltcesqvgtcamcygrslatgklvdigeavgiiaaqsigepgtqltmrtfhtggvagdditqglprvvelfeartpkgvapiseasgrvrieetektkkivvtpddgsdetafpiskrarllvgegdhvevgqkltvgatnphdvlrilgqravqvhlvgevqkvynsqgvsihdkhieiiirqmlrrvtiiesgdaellpgelvertkfetenrrvvqegghpasgrpqlmgitkaslateswlsaasfqettrvltdaainaksdsliglkenviigklipagtglsryrnirvepteeakaam/atadpVKdyLkqIgKvpLlnaeqevelakrieaglfaedklansdklapklkreleiiaedgrraknhlleaNlRLvvslakRYTgRgmlFldliqegnlgliravekfdytKgYkfSTYaTWWirQaiTRamadqartiripVHmvEvinklarvqrqmlqdlgreptpeelakeldmtpekvievqkygrepislhtplgEdgDsefgdliedseavvpadavsftllqeqlhsvldtlsereagvvsmrfgltdgqpktldeigkvygvtRERiRQiesktmsklrhpsrsqvlrdyl/ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTtvyRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYrtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgratrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvyRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga/ppvkgRatrqraavsaalqeveefrsaqelhdmlkhkgdavglTTvyRtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga >7x76_H:"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF STREPTOMYCES COELICOLOR RNAP-PROMOTER OPEN COMPLEX WITH TWO ZUR DIMERS organism=? DNA sequence DG(P1):DC(O84) DG(P2):DC(O83) DC(P3):DG(O82) DG(P4):DC(O81) DA(P5):DT(O80) DC(P6):DG(O79) DC(P7):DG(O78) DC(P8):DG(O77) DG(P9):DC(O76) DG(P10):DC(O75) DC(P11):DG(O74) DG(P12):DC(O73) DC(P13):DG(O72) DC(P14):DG(O71) DC(P15):DG(O70) DG(P16):DC(O69) DC(P17):DC(O68) DT(P18):DT(O67) DA(P19):DA(O66) DC(P20):DC(O65) DG(P21):DG(O64) DG(P22):DG(O63) DA(P23):DT(O62) DG(P24):DC(O61) DT(P25):DA(O60) DC(P26):DG(O59) DA(P27):DT(O58) DA(P28):DT(O57) DC(P29):DG(O56) DT(P30):DA(O55) DA(P31):DT(O54) DC(P32):DG(O53) DG(P33):DC(O52) DG(P34):DC(O51) DG(P35):DC(O50) DT(P36):DA(O49) DA(P37):DT(O48) DG(P38):DC(O47) DG(P39):DC(O46) DG(P40):DC(O45) DG(P41):DC(O44) DG(P42):DC(O43) DT(P43):DA(O42) DA(P44):DT(O41) DT(P45):DA(O40) DC(P46):DG(O39) DG(P47):DC(O38) DG(P48):DC(O37) DG(P49):DC(O36) DC(P50):DG(O35) DA(P51):DT(O34) DA(P52):DT(O33) DC(P53):DG(O32) DG(P54):DC(O31) DC(P55):DG(O30) DG(P56):DC(O29) DG(P57):DC(O28) DC(P58):DG(O27) DA(P59):DT(O26) DC(P60):DG(O25) DT(P61):DA(O24) DG(P62):DC(O23) DA(P63):DT(O22) DA(P64):DT(O21) DC(P65):DG(O20) DA(P66):DT(O19) DC(P67):DG(O18) DC(P68):DG(O17) DG(P69):DC(O16) DT(P70):DA(O15) DG(P72):DC(O13) DT(P73):DA(O12) DC(P74):DG(O11) DA(P75):DT(O10) DT(P76):DA(O9) DG(P77):DC(O8) DT(P78):DA(O7) DG(P79):DC(O6) DC(P80):DG(O5) DC(P81):DG(O4) DT(P82):DA(O3) DT(P83):DA(O2) DG(P84):DC(O1) chainH ( 6) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLN33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) LEU48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) THR50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ppvkgRatrqraavsaalqeveefrsaQelhdmlkhkgdavgLTTvYrtlqsladagevdvlrtaegesvyrrcstgdhhhhlvcracgkavevegpavekwaeaiaaehgyvnvahtveifgtcadcaga >7x7q_AMP:RuvA_domain_2-like;Nucleic_acid-binding_proteins;DNA_helicase_RuvA_subunit,_C-terminal_domain; title=CRYOEM STRUCTURE OF RUVA-RUVB-HOLLIDAY JUNCTION COMPLEX organism=? DNA sequence DA(K27):DT(I29) DT(K28):DA(I28) DA(K29):DT(I27) DT(K30):DA(I26) DT(K31):DA(I25) DT(K32):DA(I24) DA(K33):DT(I23) DT(K34):DA(I22) DT(K35):DA(I21) DA(K36):DT(I20) DT(K37):DA(I19) DT(K38):DA(I18) DA(K39):DT(I17) DT(K40):DA(I16) DA(K41):DT(I15) DT(K42):DA(I14) DA(K43):DT(I13) DT(K44):DA(I12) DT(K45):DA(I11) DA(K46):DT(I10) DT(K47):DA(I9) DA(K48):DT(I8) DA(K49):DT(I7) DT(K50):DA(I6) DA(K51):DT(I5) DT(K52):DA(I4) chainA (119) LYS119 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM chainP (292) ARG317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 2 0 0 prot.sequence migrlrgtlaekqpphlildvngvgyevevpmttlyrlpsvgepvtlhthlvvredahllygfaekrerelfrelirlngvgpklalalmsglevdelvrcvqaqdtstlvkipgvgkKtaerllvelkdrfkawenvssaeadavsalialgfkpqeasravaavpgedlsseemirqalkgmv/rairplkladyigqpsvreqmelfihaargrqealdhtlifgppglgkttlaniiaqemgvsikstsgpvlerpgdlaalltnleagdvlfvdeihrlspiveevlypamedfqldimIaarsikldlppftlvgattragmltnplrdrfgivqrlefynvedlativsrsagilgleiepqgaaeiakrargtprianrllrrvrdfaevrgqgditrviadkalnlldvdergfdhldrrllltmidkfdggpvgidnlaaalseerhtiedvlepyliqqgyimrtprgrvvtrhaylhfglnip/rairplkladyigqpsvreqmelfihaargrqealdhtlifgppglgkttlaniiaqemgvsikstsgpvlerpgdlaalltnleagdvlfvdeihrlspiveevlypamedfqldimiaarsikldlppftlvgattragmltnplrdrfgivqrlefynvedlativsrsagilgleiepqgaaeiakrargtprianrllrrvrdfaevrgqgditrviadkalnlldvdergfdhldrrllltmidkfdggpvgidnlaaalseerhtiedvlepyliqqgyimrtpRgrvvtrhaylhfglnip >7x7q_CF:RuvA_domain_2-like;Nucleic_acid-binding_proteins;DNA_helicase_RuvA_subunit,_C-terminal_domain; title=CRYOEM STRUCTURE OF RUVA-RUVB-HOLLIDAY JUNCTION COMPLEX organism=? DNA sequence DT(J11):DA(I43) DA(J12):DT(I42) DT(J13):DA(I41) DT(J14):DA(I40) DA(J15):DT(I39) DT(J16):DA(I38) DA(J17):DT(I37) DA(J18):DT(I36) DT(J19):DA(I35) DA(J20):DT(I34) DT(J21):DA(I33) DT(J22):DA(I32) DA(J23):DT(I31) chainC chainF ( 54) ARG54 0 0 0 0 0 0 0 0 0 0 0 1 3 ( 84) LYS84 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence migrlrgtlaekqpphlildvngvgyevevpmttlyrlpsvgepvtlhthlvvredahllygfaekrerelfrelirlngvgpklalalmsglevdelvrcvqaqdtstlvkipgvgkktaerllvelkdrfkaw/migrlrgtlaekqpphlildvngvgyevevpmttlyrlpsvgepvtlhthlvvRedahllygfaekrerelfrelirlngvgpKlalalmsglevdelvrcvqaqdtstlvkipgvgkktaerllvelkdrfkawvssaeadavsalialgfkpqeasravaavpgedlsseemirqalkgmv >7x7q_F:RuvA_domain_2-like;Nucleic_acid-binding_proteins;DNA_helicase_RuvA_subunit,_C-terminal_domain; title=CRYOEM STRUCTURE OF RUVA-RUVB-HOLLIDAY JUNCTION COMPLEX organism=? DNA sequence DT(J11):DA(I43) DA(J12):DT(I42) DT(J13):DA(I41) DT(J14):DA(I40) DA(J15):DT(I39) DT(J16):DA(I38) DA(J17):DT(I37) DA(J18):DT(I36) DT(J19):DA(I35) DA(J20):DT(I34) DT(J21):DA(I33) DT(J22):DA(I32) DA(J23):DT(I31) chainF ( 54) ARG54 0 0 0 0 0 0 0 0 0 0 0 1 3 ( 84) LYS84 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence migrlrgtlaekqpphlildvngvgyevevpmttlyrlpsvgepvtlhthlvvRedahllygfaekrerelfrelirlngvgpKlalalmsglevdelvrcvqaqdtstlvkipgvgkktaerllvelkdrfkawvssaeadavsalialgfkpqeasravaavpgedlsseemirqalkgmv >7xaq_ACG:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=CRYO-EM STRUCTURE OF PVRA-DNA COMPLEX organism=? DNA sequence DT(I1):DA(E43) DT(I2):DA(E42) DC(I3):DG(E41) DG(I4):DC(E40) DG(I5):DC(E39) DT(I6):DA(E38) DC(I7):DG(E37) DA(I8):DT(E36) DA(I9):DT(E35) DA(I10):DT(E34) DA(I11):DT(E33) DA(I12):DT(E32) DA(I13):DT(E31) DA(I14):DT(E30) DT(I15):DA(E29) DG(I16):DC(E28) DA(I17):DT(E27) DC(I18):DG(E26) DC(I19):DG(E25) DG(I20):DC(E24) DA(I21):DT(E23) DG(I22):DC(E22) DA(I23):DT(E21) DC(I24):DG(E20) DA(I25):DT(E19) DT(I26):DA(E18) DT(I27):DA(E17) DA(I28):DT(E16) DG(I29):DC(E15) DT(I30):DA(E14) DC(I31):DG(E13) DT(I32):DA(E12) DC(I33):DG(E11) DG(I34):DC(E10) DG(I35):DC(E9) DT(I36):DA(E8) DC(I37):DG(E7) DA(I38):DT(E6) DC(I39):DG(E5) DG(I40):DC(E4) DG(I41):DC(E3) DT(I42):DA(E2) DC(I43):DG(E1) chainA ( 29) THR35 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) LYS47 0 0 0 0 2 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) TYR51 0 0 0 0 0 27 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) LYS52 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) LYS57 0 0 7 10 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ALA58 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) LYS115 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 7) GLU10 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) LYS47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) TYR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS52 0 0 0 0 0 0 0 0 0 0 0 4 0 5 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) LYS55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 31) GLU37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) LYS47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 18 0 0 0 0 0 0 0 0 0 prot.sequence kvrefrrreqeildtalklfleqgedsvTvemiadavgigKgtiYKhfksKAeiylrlmldyerdlaalfhsedvardkealsrayfefrmrdpqryrlfdrleekvvKtsqvpemveelhkirasnferltqlikeriadgklenvppyfhycaawalvhgavalyhspfwrevledqegffhflmdigvrmgnkrk/kvrefrrreqeildtalklfleqgedsvtvEmiadavgigKgtiykhfkskaeiylrlmldyerdlaalfhsedvardkealsrayfefrmrdpqryrlfdrleekvvktsqvpemveelhkirasnferltqlikeriadgklenvppyfhycaawalvhgavalyhspfwrevledqegffhflmdigvrmgnkrk/eprkvrEfrrreqeildtalklfleqgedsvtvemiadavgigKgTiYKhfKskaeiylrlmldyerdlaalfhsedvardkealsrayfefrmrdpqryrlfdrleekvvktsqvpemveelhkirasnferltqlikeriadgklenvppyfhycaawalvhgavalyhspfwrevledqegffhflmdigvrmgnkrk >7xaq_B:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=CRYO-EM STRUCTURE OF PVRA-DNA COMPLEX organism=? DNA sequence DG(F1):DC(J43) DA(F2):DT(J42) DC(F3):DG(J41) DC(F4):DG(J40) DG(F5):DC(J39) DT(F6):DA(J38) DG(F7):DC(J37) DA(F8):DT(J36) DC(F9):DG(J35) DC(F10):DG(J34) DG(F11):DC(J33) DA(F12):DT(J32) DG(F13):DC(J31) DA(F14):DT(J30) DC(F15):DG(J29) DT(F16):DA(J28) DA(F17):DT(J27) DA(F18):DT(J26) DT(F19):DA(J25) DG(F20):DC(J24) DT(F21):DA(J23) DC(F22):DG(J22) DT(F23):DA(J21) DC(F24):DG(J20) DG(F25):DC(J19) DG(F26):DC(J18) DT(F27):DA(J17) DC(F28):DG(J16) DA(F29):DT(J15) DT(F30):DA(J14) DT(F31):DA(J13) DT(F32):DA(J12) DT(F33):DA(J11) DT(F34):DA(J10) DT(F35):DA(J9) DT(F36):DA(J8) DG(F37):DC(J7) DA(F38):DT(J6) DC(F39):DG(J5) DC(F40):DG(J4) DG(F41):DC(J3) DA(F42):DT(J2) DA(F43):DT(J1) chainB ( 11) ARG14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 32) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 0 0 ( 33) VAL36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 ( 34) GLU37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 18 3 0 0 ( 44) LYS47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 1 0 0 0 0 ( 46) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 48) TYR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 22 0 0 0 0 0 ( 49) LYS52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 15 0 0 0 0 0 0 0 ( 52) LYS55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 ( 53) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 (109) LYS112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 prot.sequence eprkvrefrrReqeildtalklfleqgedsvTVEmiadavgigKgTiYKhfKSkaeiylrlmldyerdlaalfhsedvardkealsrayfefrmrdpqryrlfdrleeKvvktsqvpemveelhkirasnferltqlikeriadgklenvppyfhycaawalvhgavalyhspfwrevledqegffhflmdigvrmgnkrk >7xaq_BDH:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=CRYO-EM STRUCTURE OF PVRA-DNA COMPLEX organism=? DNA sequence DG(F1):DC(J43) DA(F2):DT(J42) DC(F3):DG(J41) DC(F4):DG(J40) DG(F5):DC(J39) DT(F6):DA(J38) DG(F7):DC(J37) DA(F8):DT(J36) DC(F9):DG(J35) DC(F10):DG(J34) DG(F11):DC(J33) DA(F12):DT(J32) DG(F13):DC(J31) DA(F14):DT(J30) DC(F15):DG(J29) DT(F16):DA(J28) DA(F17):DT(J27) DA(F18):DT(J26) DT(F19):DA(J25) DG(F20):DC(J24) DT(F21):DA(J23) DC(F22):DG(J22) DT(F23):DA(J21) DC(F24):DG(J20) DG(F25):DC(J19) DG(F26):DC(J18) DT(F27):DA(J17) DC(F28):DG(J16) DA(F29):DT(J15) DT(F30):DA(J14) DT(F31):DA(J13) DT(F32):DA(J12) DT(F33):DA(J11) DT(F34):DA(J10) DT(F35):DA(J9) DT(F36):DA(J8) DG(F37):DC(J7) DA(F38):DT(J6) DC(F39):DG(J5) DC(F40):DG(J4) DG(F41):DC(J3) DA(F42):DT(J2) DA(F43):DT(J1) chainB ( 11) ARG14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 32) THR35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 0 0 ( 33) VAL36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 ( 34) GLU37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 18 3 0 0 ( 44) LYS47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 1 0 0 0 0 ( 46) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 ( 48) TYR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 22 0 0 0 0 0 ( 49) LYS52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 15 0 0 0 0 0 0 0 ( 52) LYS55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 ( 53) SER56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 (109) LYS112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 chainH ( 34) GLU37 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) LYS47 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 8) ARG14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) LYS47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) TYR51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 26 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) LYS52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) LYS55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eprkvrefrrReqeildtalklfleqgedsvTVEmiadavgigKgTiYKhfKSkaeiylrlmldyerdlaalfhsedvardkealsrayfefrmrdpqryrlfdrleeKvvktsqvpemveelhkirasnferltqlikeriadgklenvppyfhycaawalvhgavalyhspfwrevledqegffhflmdigvrmgnkrk/kvrefrrReqeildtalklfleqgedsvtvemiadavgigKgTiYKhfKskaeiylrlmldyerdlaalfhsedvardkealsrayfefrmrdpqryrlfdrleekvvktsqvpemveelhkirasnferltqlikeriadgklenvppyfhycaawalvhgavalyhspfwrevledqegffhflmdigvrmgnkrk/eprkvrefrrreqeildtalklfleqgedsvtvEmiadavgigKgtiykhfkskaeiylrlmldyerdlaalfhsedvardkealsrayfefrmrdpqryrlfdrleekvvktsqvpemveelhkirasnferltqlikeriadgklenvppyfhycaawalvhgavalyhspfwrevledqegffhflmdigvrmgnkrk >7xcr_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF DOT1L AND H2BK34UB-H3K79NLE NUCLEOSOME 1:1 COMPLEX organism=HOMO SAPIENS / SYNTHETIC CONSTRUCT DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainF ( 21) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 1) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdftdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/Rsrkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdftdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/akrhrkvlrdniqgitkpaiRrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/Rkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7xcr_E:Histone-fold; title=CRYO-EM STRUCTURE OF DOT1L AND H2BK34UB-H3K79NLE NUCLEOSOME 1:1 COMPLEX organism=? DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdftdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >7xd1_ABCDEFGH:Histone-fold;PH_domain-like; title=CRYO-EM STRUCTURE OF UNMODIFIED NUCLEOSOME organism=HOMO SAPIENS DNA sequence DC(J-73):DG(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdNIqgitkpairrlarrggvkrisglIyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfg/aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7xd1_G:Histone-fold; title=CRYO-EM STRUCTURE OF UNMODIFIED NUCLEOSOME organism=HOMO SAPIENS DNA sequence DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >7xf1_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYSTAL STRUCUTRE OF APOCASDING IN COMPLEX WITH SSDNA organism=? DNA sequence DT(B1) DT(B2) DT(B3) DT(B4) DT(B5) DT(B6) DT(B7) DT(B8) DT(B9) DT(B10) DT(B11) chainA ( 94) PRO97 0 0 0 0 0 0 0 0 4 0 1 (193) PHE196 0 0 0 0 0 0 4 4 0 3 0 (197) ALA200 0 0 0 0 0 0 0 0 0 3 0 (229) SER247 0 0 0 0 0 0 2 0 0 0 0 (230) VAL248 0 0 0 0 0 0 0 0 0 13 0 (233) HIS251 0 0 0 0 0 0 0 0 0 0 1 (261) THR292 0 0 0 3 0 0 0 0 0 0 0 (307) ARG338 0 0 0 0 0 0 0 0 0 0 15 (325) PRO356 0 0 0 0 0 2 0 0 0 0 0 (439) TYR470 0 0 0 0 0 5 0 0 0 0 0 (462) LYS493 0 0 0 0 0 6 0 0 0 0 0 (525) ASN556 0 0 0 0 1 0 0 0 0 0 0 (526) ARG557 0 0 1 11 4 0 0 0 0 0 0 (539) PHE570 28 10 0 0 0 0 0 0 0 0 0 (542) ILE573 0 4 0 0 0 0 0 0 0 0 0 (581) TRP612 1 0 0 0 0 0 0 0 0 0 0 prot.sequence padalpgegavrevlrpllkqaaektaagkivfaeaatgtgkgrmiaslaaaaaikgdtvvvsaplavtwqlvndmkdipevrrvgltlslgrPnfispqrtlewaidneradlaawiegggkplslrsmetskvishelcwlledalllaedlpadsllltsedpadcpaqqlyvamrsnyteagiilcshFmlaAhtrmmqmrlslphfidtlivdeahlleqafaSVytHtlrlrplmrtiegldalkelftqmqvaTntslnvplsdvpelipalkdtvktlgalptkgmsrdarsviriatRaandalsghsrlrievtPvhsypmllsgrsnlqrallglwnatggatlvsatlfttgdngsltrwklevpteraaflppvhpawttapvllhkefcahepddspewatecaqtiqgvastaqggtlvlctsYqntellagrlgaalgdrlivqsKtssaatclaqfkakhkagirpvwlglgaawtgidlsdhslpdnpeldrllsdlvitripvgqNRsltherrtaiggFriIsqeaawhfrqglgrlvrrpgvthknlwvldariyggaaWvapfrqildrykk >7xfc_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF NUCLEOSOME-DI COMPLEX (-30I, APO STATE) organism=? DNA sequence DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DC(J30):DI(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/tRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/kEsyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/rDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/Esyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7xfc_E:Histone-fold; title=STRUCTURE OF NUCLEOSOME-DI COMPLEX (-30I, APO STATE) organism=? DNA sequence DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DI(I-30):DC(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger >7xfh_B:Histone-fold; title=STRUCTURE OF NUCLEOSOME-AAG COMPLEX (A-30I, POST-CATALYTIC STATE) organism=? DNA sequence DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) chainB ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >7xfi_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF NUCLEOSOME-DI COMPLEX (-50I, APO STATE) organism=? DNA sequence DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DC(J50):DI(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/vlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvIrdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/RkesyaiyvykvlkqvhpdtgisskamsimnSfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/rDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/RkesyaiyvykvlkqvhpdtgisskamsimnSfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7xfi_C:Histone-fold; title=STRUCTURE OF NUCLEOSOME-DI COMPLEX (-50I, APO STATE) organism=? DNA sequence DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DI(I-50):DC(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp >7xfl_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF NUCLEOSOME-AAG COMPLEX (A-53I, FREE STATE) organism=? DNA sequence DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DI(I-53):DC(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/lrDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/kesyaiyvykvlkqvhpdtgisskamsimnSfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/KesyaiyvykvlkqvhpdtgisskamsimnsFvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7xfm_C:Histone-fold; title=STRUCTURE OF NUCLEOSOME-AAG COMPLEX (A-53I, POST-CATALYTIC STATE) organism=? DNA sequence DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DC(J53):AAB(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp >7xfn_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF NUCLEOSOME-DI COMPLEX (-55I, APO STATE) organism=? DNA sequence DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DI(I-55):DC(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 13 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/vlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvIrdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/Rkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/rDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/RkesyaiyvykvlkqvhpdtgisskamsimnSfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7xfn_E:Histone-fold; title=STRUCTURE OF NUCLEOSOME-DI COMPLEX (-55I, APO STATE) organism=? DNA sequence DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DI(I-55):DC(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger >7xfz_ABCD: title=CRYOEM STRUCTURE OF TYPE IV-A CSF-CRRNASP14-DSDNA TERNARY COMPLEX organism=? DNA sequence DA(G1):DT(F36) DA(G2):DT(F35) DC(G3):DG(F34) DA(G4):DT(F33) DC(G5):DG(F32) DC(G6):DG(F31) DC(G7):DG(F30) DT(G8):DA(F29) DT(G9):DA(F28) DT(G10):DA(F27) DC(G11):DG(F26) DT(G12):DA(F25) DG(G13):DC(F24) DG(G14):DC(F23) DA(G15):DT(F22) DT(G16):DC(F21) DT(G17):DG(F20) DT(G18):DT(F19) DA(G19):DT(F18) DT(G20):DG(F17) DT(G21):DT(F16) DT(G22):DG(F15) chainA ( 51) PHE51 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) LYS75 0 0 0 0 0 0 0 0 2 4 4 0 0 0 0 0 0 0 0 0 0 0 ( 79) TYR79 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (120) THR120 0 0 0 0 0 0 0 0 0 0 12 3 0 0 0 0 0 0 0 0 0 0 (121) MET121 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 (175) TYR175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0 0 (178) ARG178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (179) LYS179 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (182) ALA182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (187) LEU187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 chainB ( 77) PRO78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (111) ALA112 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (117) THR118 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (119) ILE120 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 chainC ( 21) ASN21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 30) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 ( 36) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 ( 43) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 45) MET45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 ( 47) TYR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 ( 59) SER59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 63) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (172) PRO172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (226) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (229) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (231) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 (232) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 (235) GLU250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (238) ILE253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainD ( 47) TYR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 ( 59) SER59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (139) MET139 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 prot.sequence mrypsdivdqvlkagpdkglltwegvdaacshcsrpiqngdlyspssvgaFfsdtrdlastsrsicwrcvvlrkKpmlYglsaavvtqdgiysiskdvnkawlfttpppapflvvhsssTMqhlswrtpvtldnrrihvrygpnlfivrpevvrkalsiadrvnegqkkwvtpvYfdRKaaAmghgLitragaemltqeeqeffqsvtpgerwalsylmhskrpepevgecitekvmtsln/vnlkvtidlsnpmmepgdllhldallgalrvsraraehgdainprdyhydlpleryqapsgdwvfkasafklkrqlPnqmwmqtgrlsiveaarhrqsgylqlragkpnpAggpfkTsIyhrpivqaeltafcvgdqqgieallsecrqiggkrgvgfgqvagfkvepvaetdcpwswralpadadprlvtseharciaairgpywdrtlhvealaptp/mqievtvrnitpifsaapgsNyitidgtiNpppgvSrFPlvRTrMmYvaadvgdgvikSvplQivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnpdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgPitqvvwarrmdpilnlgssedvevinggavaangwiqdllanskaaaskkkngRglKaFNahEvvIpglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqs/mqievtvrnitpifsaapgsnyitidgtinpppgvsrfplvrtrmmYvaadvgdgvikSvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwafnahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak >7xfz_C: title=CRYOEM STRUCTURE OF TYPE IV-A CSF-CRRNASP14-DSDNA TERNARY COMPLEX organism=? DNA sequence DA(G1):DT(F36) DA(G2):DT(F35) DC(G3):DG(F34) DA(G4):DT(F33) DC(G5):DG(F32) DC(G6):DG(F31) DC(G7):DG(F30) DT(G8):DA(F29) DT(G9):DA(F28) DT(G10):DA(F27) DC(G11):DG(F26) DT(G12):DA(F25) DG(G13):DC(F24) DG(G14):DC(F23) DA(G15):DT(F22) DT(G16):DC(F21) DT(G17):DG(F20) DT(G18):DT(F19) DA(G19):DT(F18) DT(G20):DG(F17) DT(G21):DT(F16) DT(G22):DG(F15) chainC ( 21) ASN21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 30) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 ( 36) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 ( 43) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 45) MET45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 ( 47) TYR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 ( 59) SER59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 63) GLN63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (172) PRO172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (226) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (229) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (231) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 (232) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 (235) GLU250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (238) ILE253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence mqievtvrnitpifsaapgsNyitidgtiNpppgvSrFPlvRTrMmYvaadvgdgvikSvplQivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnpdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgPitqvvwarrmdpilnlgssedvevinggavaangwiqdllanskaaaskkkngRglKaFNahEvvIpglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqs >7xg0_ABC: title=CRYOEM STRUCTURE OF TYPE IV-A CSF-CRRNA-DSDNA TERNARY COMPLEX organism=? DNA sequence DT(K36):DA(J19) DT(K37):DA(J18) DG(K38):DC(J17) DC(K39):DG(J16) DT(K40):DA(J15) DC(K41):DG(J14) DC(K42):DG(J13) DA(K43):DT(J12) DG(K44):DC(J11) DA(K45):DT(J10) DA(K46):DT(J9) DA(K47):DT(J8) DG(K48):DC(J7) DG(K49):DC(J6) DG(K50):DC(J5) DT(K51):DA(J4) DG(K52):DC(J3) DT(K53):DA(J2) chainA ( 51) PHE51 0 0 0 0 0 0 0 0 0 6 11 3 1 0 0 0 0 0 ( 75) LYS75 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 ( 79) TYR79 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (120) THR120 0 0 0 0 0 0 0 6 15 0 0 0 0 0 0 0 0 0 (121) MET121 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 (175) TYR175 0 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) LYS179 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (182) ALA182 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 84) THR85 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 86) ARG87 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (109) ASN110 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (111) ALA112 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 (117) THR118 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (119) ILE120 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 chainC ( 21) ASN21 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN30 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER36 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PHE38 0 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG181 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) ARG241 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) ALA245 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) PHE246 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ASN247 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrypsdivdqvlkagpdkglltwegvdaacshcsrpiqngdlyspssvgaFfsdtrdlastsrsicwrcvvlrkKpmlYglsaavvtqdgiysiskdvnkawlfttpppapflvvhsssTMqhlswrtpvtldnrrihvrygpnlfivrpevvrkalsiadrvnegqkkwvtpvYfdrKaaAmghglitragaemltqeeqeffqsvtpgerwalsylmhskrpepevgecitekvmtsln/vnlkvtidlsnpmmepgdllhldallgalrvsraraehgdainprdyhydlpleryqapsgdwvfkasafklkrqlpnqmwmqTgRlsiveaarhrqsgylqlragkpNpAggpfkTsIyhrpivqaeltafcvgdqqgieallsecrqiggkrgvgfgqvagfkvepvaetdcpwswralpadadprlvtseharciaairgpywdrtlhvealaptp/mqievtvrnitpifsaapgsNyitidgtiNpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnpdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskaaaskkkngRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqs >7xg0_DEFGH: title=CRYOEM STRUCTURE OF TYPE IV-A CSF-CRRNA-DSDNA TERNARY COMPLEX organism=? DNA sequence DC(K15) DA(K16) DT(K17) DC(K18) DA(K19) DA(K20) DG(K21) DC(K22) DC(K23) DT(K24) DT(K25) DC(K26) DC(K27) DT(K28) DT(K29) DC(K30) DA(K31) DG(K32) DG(K33) DT(K34) DG(K35) DT(K36) DT(K37) DG(K38) DC(K39) DT(K40) DC(K41) DC(K42) DA(K43) DG(K44) DA(K45) DA(K46) DA(K47) DG(K48) DG(K49) DG(K50) DT(K51) DG(K52) DT(K53) chainD ( 25) ILE25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) MET139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) ALA245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 36) SER36 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) VAL41 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) MET139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) LYS244 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) ALA245 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) PHE246 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) ILE25 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER36 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PHE38 0 0 0 0 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG181 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ARG241 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) PHE246 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ASN247 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 39) PRO39 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) PRO111 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) MET139 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ASN247 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (106) ARG106 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) ASP228 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LEU229 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwaRRmdpilnlgssedvevinggavaangwiqdllanskaaaskkkgRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsake/mqievtvrnitpifsaapgsnyitidgtinpppgvSrFPlVrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarrmdpilnlgssedvevinggavaangwiqdllanskagRglKAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa/mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskagRglkaFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa/mqievtvrnitpifsaapgsnyitidgtinpppgvsrfPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwafNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak/mfvkqvffdlgarihadearalvakllddtqpglvsalmnympasktsktefplvqfsnfnqgfallgfgevgaqilsdatpiihdamaklfasrgqgvvvqvssRdvplscekrpyglqytvakmvvqkkhehrerlanpetgkvfleglflrslerqaaavgmvlprdlvvsfkgaervssvklrpdstlahgslrhavfevnarlgglwsvgfllskgfghintDLqlgqg >7xg0_H: title=CRYOEM STRUCTURE OF TYPE IV-A CSF-CRRNA-DSDNA TERNARY COMPLEX organism=? DNA sequence DC(K15) DA(K16) DT(K17) DC(K18) DA(K19) DA(K20) DG(K21) DC(K22) DC(K23) DT(K24) DT(K25) DC(K26) DC(K27) DT(K28) DT(K29) DC(K30) DA(K31) DG(K32) DG(K33) DT(K34) DG(K35) DT(K36) DT(K37) DG(K38) DC(K39) DT(K40) DC(K41) DC(K42) DA(K43) DG(K44) DA(K45) DA(K46) DA(K47) DG(K48) DG(K49) DG(K50) DT(K51) DG(K52) DT(K53) chainH (106) ARG106 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) ASP228 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LEU229 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mfvkqvffdlgarihadearalvakllddtqpglvsalmnympasktsktefplvqfsnfnqgfallgfgevgaqilsdatpiihdamaklfasrgqgvvvqvssRdvplscekrpyglqytvakmvvqkkhehrerlanpetgkvfleglflrslerqaaavgmvlprdlvvsfkgaervssvklrpdstlahgslrhavfevnarlgglwsvgfllskgfghintDLqlgqg >7xg2_ABC: title=CRYOEM STRUCTURE OF TYPE IV-A NTS-NICKED DSDNA BOUND CSF-CRRNA TERNARY COMPLEX organism=? DNA sequence DA(J2):DT(K53) DC(J3):DG(K52) DA(J4):DT(K51) DC(J5):DG(K50) DC(J6):DG(K49) DC(J7):DG(K48) DT(J8):DA(K47) DT(J9):DA(K46) DT(J10):DA(K45) DC(J11):DG(K44) DA(J12):DA(K43) DT(J13):DC(K42) DT(J14):DC(K41) DA(J15):DT(K40) DT(J16):DC(K39) DT(J17):DG(K38) DA(J18):DT(K37) DT(J19):DT(K36) chainA ( 51) PHE51 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 ( 75) LYS75 0 0 0 0 0 0 0 5 4 1 0 0 0 0 0 0 0 0 ( 79) TYR79 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 (120) THR120 0 0 0 0 0 0 0 0 0 14 2 0 0 0 0 0 0 0 (121) MET121 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 (175) TYR175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 (178) ARG178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (182) ALA182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainB ( 84) THR85 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 86) ARG87 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (104) ARG105 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) ALA112 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 (117) THR118 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (119) ILE120 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 chainC ( 21) ASN21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 25) ILE25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 30) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 ( 36) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (181) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (226) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (230) ALA245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (231) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 (232) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 prot.sequence mrypsdivdqvlkagpdkglltwegvdaacshcsrpiqngdlyspssvgaFfsdtrdlastsrsicwrcvvlrkKpmlYglsaavvtqdgiysiskdvnkawlfttpppapflvvhsssTMqhlswrtpvtldnrrihvrygpnlfivrpevvrkalsiadrvnegqkkwvtpvYfdRkaaAmghglitragaemltqeeqeffqsvtpgerwalsylmhskrpepevgecitekvmtsln/vnlkvtidlsnpmmepgdllhldallgalrvsraraehgdainprdyhydlpleryqapsgdwvfkasafklkrqlpnqmwmqTgRlsiveaarhrqsgylqlRagkpnpAggpfkTsIyhrpivqaeltafcvgdqqgieallsecrqiggkrgvgfgqvagfkvepvaetdcpwswralpadadprlvtseharciaairgpywdrtlhvealaptp/mqievtvrnitpifsaapgsNyitIdgtiNpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnpdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskaaaskkkngRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqs >7xg2_DEFGH: title=CRYOEM STRUCTURE OF TYPE IV-A NTS-NICKED DSDNA BOUND CSF-CRRNA TERNARY COMPLEX organism=? DNA sequence DG(K52) DT(K51) DG(K50) DG(K49) DG(K48) DA(K47) DA(K46) DA(K45) DG(K44) DA(K43) DC(K42) DC(K41) DT(K40) DC(K39) DG(K38) DT(K37) DT(K36) DG(K35) DT(K34) DG(K33) DG(K32) DA(K31) DC(K30) DT(K29) DT(K28) DC(K27) DC(K26) DT(K25) DT(K24) DC(K23) DC(K22) DG(K21) DA(K20) DA(K19) DC(K18) DT(K17) DA(K16) DC(K15):DA(K16) chainD ( 25) ILE25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) MET139 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) ALA245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 25) ILE25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 36) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) MET139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (224) ALA245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (225) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 (226) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) ILE25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 36) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) MET139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (220) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (224) ALA245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (225) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 (226) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 chainG ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (181) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 chainH (106) ARG106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 13 (229) LEU229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskaaaskkkgRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsake/mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarrmdpilnlgssedvevinggavaangwiqdllanskangRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa/mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskangRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa/mqievtvrnitpifsaapgsnyitidgtinpppgvsrfPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitqvvwafNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak/mfvkqvffdlgarihadearalvakllddtqpglvsalmnympasktsktefplvqfsnfnqgfallgfgevgaqilsdatpiihdamaklfasrgqgvvvqvssRdvplscekrpyglqytvakmvvqkkhehrerlanpetgkvfleglflrslerqaaavgmvlprdlvvsfkgaervssvklrpdstlahgslrhavfevnarlgglwsvgfllskgfghintdLqlgqg >7xg2_H: title=CRYOEM STRUCTURE OF TYPE IV-A NTS-NICKED DSDNA BOUND CSF-CRRNA TERNARY COMPLEX organism=? DNA sequence DG(K52) DT(K51) DG(K50) DG(K49) DG(K48) DA(K47) DA(K46) DA(K45) DG(K44) DA(K43) DC(K42) DC(K41) DT(K40) DC(K39) DG(K38) DT(K37) DT(K36) DG(K35) DT(K34) DG(K33) DG(K32) DA(K31) DC(K30) DT(K29) DT(K28) DC(K27) DC(K26) DT(K25) DT(K24) DC(K23) DC(K22) DG(K21) DA(K20) DA(K19) DC(K18) DT(K17) DA(K16) DC(K15):DA(K16) chainH (106) ARG106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 13 (229) LEU229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence mfvkqvffdlgarihadearalvakllddtqpglvsalmnympasktsktefplvqfsnfnqgfallgfgevgaqilsdatpiihdamaklfasrgqgvvvqvssRdvplscekrpyglqytvakmvvqkkhehrerlanpetgkvfleglflrslerqaaavgmvlprdlvvsfkgaervssvklrpdstlahgslrhavfevnarlgglwsvgfllskgfghintdLqlgqg >7xg3_ABC: title=CRYOEM STRUCTURE OF TYPE IV-A CASDING BOUND NTS-NICKED CSF-CRRNA- DSDNA QUATERNARY COMPLEX organism=? DNA sequence DC(J3):DG(K52) DA(J4):DT(K51) DC(J5):DG(K50) DC(J6):DG(K49) DC(J7):DG(K48) DT(J8):DA(K47) DT(J9):DA(K46) DT(J10):DA(K45) DC(J11):DG(K44) DA(J12):DA(K43) DT(J13):DC(K42) DT(J14):DC(K41) DA(J15):DT(K40) DT(J16):DC(K39) DT(J17):DG(K38) DA(J18):DT(K37) DT(J19):DT(K36) DT(J20):DG(K35) DA(J21):DT(K34) DT(J22):DG(K33) DT(J23):DG(K32) DT(J24):DA(K31) DT(J25):DC(K30) DT(J26):DT(K29) DT(J27):DT(K28) DT(J28):DC(K27) DT(J29):DC(K26) DT(J30):DT(K25) DT(J31):DT(K24) DT(J32):DC(K23) DT(J33):DC(K22) chainA ( 51) PHE51 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) LYS75 0 0 0 0 0 0 7 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) TYR79 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) THR120 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) MET121 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) TYR175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) ALA182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) LEU187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 84) THR85 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG87 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ASN110 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) ALA112 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) THR118 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ILE120 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 20) SER20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ILE25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ILE29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) TYR47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) SER59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) PRO61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (226) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 7 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) ALA245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrypsdivdqvlkagpdkglltwegvdaacshcsrpiqngdlyspssvgaFfsdtrdlastsrsicwrcvvlrkKpmlYglsaavvtqdgiysiskdvnkawlfttpppapflvvhsssTMqhlswrtpvtldnrrihvrygpnlfivrpevvrkalsiadrvnegqkkwvtpvYfdrkaaAmghgLitragaemltqeeqeffqsvtpgerwalsylmhskrpepevgecitekvmtsln/vnlkvtidlsnpmmepgdllhldallgalrvsraraehgdainprdyhydlpleryqapsgdwvfkasafklkrqlpnqmwmqTgRlsiveaarhrqsgylqlragkpNpAggpfkTsIyhrpivqaeltafcvgdqqgieallsecrqiggkrgvgfgqvagfkvepvaetdcpwswralpadadprlvtseharciaairgpywdrtlhvealaptp/mqievtvrnitpifsaapgSnyitIdgtINpppgvsrFPlvRtrmmYvaadvgdgvikSvPlqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnpdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarrmdpilnlgssedvevinggavaangwiqdllanskaaaskkkngRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaq >7xg3_DEFGH: title=CRYOEM STRUCTURE OF TYPE IV-A CASDING BOUND NTS-NICKED CSF-CRRNA- DSDNA QUATERNARY COMPLEX organism=? DNA sequence DT(K51) DG(K50) DG(K49) DG(K48) DA(K47) DA(K46) DA(K45) DG(K44) DA(K43) DC(K42) DC(K41) DT(K40) DC(K39) DG(K38) DT(K37) DT(K36) DG(K35) DT(K34) DG(K33) DG(K32) DA(K31) DC(K30) DT(K29) DT(K28) DC(K27) DC(K26) DT(K25) DT(K24) DC(K23) DC(K22) DG(K21) DA(K20) DA(K19) DC(K18) DT(K17):DC(K18) chainD ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) ALA245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 25) ILE25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 36) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) MET139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (219) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (223) ALA245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (224) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 (225) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 chainF ( 36) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 ( 41) VAL41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (139) MET139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 (223) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 (224) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 chainG ( 87) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 chainH (106) ARG106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 prot.sequence mqievtvrnitpifsaapgsnyitidgtinpppgvsrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitqvvwaRRmdpilnlgssedvevinggavaangwiqdllanskaaaskkgRglKAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak/mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskngRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa/mqievtvrnitpifsaapgsnyitidgtinpppgvSrFPlVrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnpdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskgrglkaFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa/mqievtvrnitpifplvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak/mfvkqvffdlgarihadearalvakllddtqpglvsalmnympasktsktefplvqfsnfnqgfallgfgevgaqilsdatpiihdamaklfasrgqgvvvqvssRdvplscekrpyglqytvakmvvqkkhehrerlanpetgkvfleglflrslerqaaavgmvlprdlvvsfkgaervssvklrpdstlahgslrhavfevnarlgglwsvgfllskgfghintdlqlgqg >7xg3_G: title=CRYOEM STRUCTURE OF TYPE IV-A CASDING BOUND NTS-NICKED CSF-CRRNA- DSDNA QUATERNARY COMPLEX organism=? DNA sequence DT(K51) DG(K50) DG(K49) DG(K48) DA(K47) DA(K46) DA(K45) DG(K44) DA(K43) DC(K42) DC(K41) DT(K40) DC(K39) DG(K38) DT(K37) DT(K36) DG(K35) DT(K34) DG(K33) DG(K32) DA(K31) DC(K30) DT(K29) DT(K28) DC(K27) DC(K26) DT(K25) DT(K24) DC(K23) DC(K22) DG(K21) DA(K20) DA(K19) DC(K18) DT(K17):DC(K18) chainG ( 87) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 prot.sequence mqievtvrnitpifplvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak >7xg4_A: title=CRYOEM STRUCTURE OF TYPE IV-A CASDING BOUND NTS-NICKED CSF-CRRNA- DSDNA QUATERNARY COMPLEX IN A SECOND STATE organism=? DNA sequence DC(J3):DG(K52) DA(J4):DT(K51) DC(J5):DG(K50) DC(J6):DG(K49) DC(J7):DG(K48) DT(J8):DA(K47) DT(J9):DA(K46) DT(J10):DA(K45) DC(J11):DG(K44) DA(J12):DA(K43) DT(J13):DC(K42) DT(J14):DC(K41) DA(J15):DT(K40) DT(J16):DC(K39) DT(J17):DG(K38) DA(J18):DT(K37) DT(J19):DT(K36) DT(J20):DG(K35) DA(J21):DT(K34) DT(J22):DG(K33) DT(J23):DG(K32) DA(J24):DA(K31) DT(J25):DC(K30) DT(J26):DT(K29) DA(J27):DT(K28) DT(J28):DC(K27) DT(J29):DC(K26) DT(J30):DT(K25) DT(J31):DT(K24) DT(J32):DC(K23) DT(J33):DC(K22) DT(J34):DG(K21) DT(J35):DA(K20) DT(J36):DA(K19) DT(J37):DC(K18) DT(J38):DT(K17) chainA ( 51) PHE51 0 0 0 0 4 1 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) LYS75 0 0 0 0 0 0 7 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) TYR79 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) THR120 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) MET121 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) TYR175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrypsdivdqvlkagpdkglltwegvdaacshcsrpiqngdlyspssvgaFfsdtrdlastsrsicwrcvvlrkKpmlYglsaavvtqdgiysiskdvnkawlfttpppapflvvhsssTMqhlswrtpvtldnrrihvrygpnlfivrpevvrkalsiadrvnegqkkwvtpvYfdrkaaamghglitragaemltqeeqeffqsvtpgerwalsylmhskrpepevgecitekvmtsln >7xg4_ABCD: title=CRYOEM STRUCTURE OF TYPE IV-A CASDING BOUND NTS-NICKED CSF-CRRNA- DSDNA QUATERNARY COMPLEX IN A SECOND STATE organism=? DNA sequence DC(J3):DG(K52) DA(J4):DT(K51) DC(J5):DG(K50) DC(J6):DG(K49) DC(J7):DG(K48) DT(J8):DA(K47) DT(J9):DA(K46) DT(J10):DA(K45) DC(J11):DG(K44) DA(J12):DA(K43) DT(J13):DC(K42) DT(J14):DC(K41) DA(J15):DT(K40) DT(J16):DC(K39) DT(J17):DG(K38) DA(J18):DT(K37) DT(J19):DT(K36) DT(J20):DG(K35) DA(J21):DT(K34) DT(J22):DG(K33) DT(J23):DG(K32) DA(J24):DA(K31) DT(J25):DC(K30) DT(J26):DT(K29) DA(J27):DT(K28) DT(J28):DC(K27) DT(J29):DC(K26) DT(J30):DT(K25) DT(J31):DT(K24) DT(J32):DC(K23) DT(J33):DC(K22) DT(J34):DG(K21) DT(J35):DA(K20) DT(J36):DA(K19) DT(J37):DC(K18) DT(J38):DT(K17) chainA ( 51) PHE51 0 0 0 0 4 1 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) LYS75 0 0 0 0 0 0 7 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) TYR79 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) THR120 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) MET121 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) TYR175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 86) ARG87 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ARG105 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ASN110 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) ALA112 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) THR118 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) ILE120 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 21) ASN21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) TYR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ILE29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) PRO33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) LYS244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) ALA245 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) GLU250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 30) ASN30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) MET139 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (180) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) ALA218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) LYS221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) ALA245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrypsdivdqvlkagpdkglltwegvdaacshcsrpiqngdlyspssvgaFfsdtrdlastsrsicwrcvvlrkKpmlYglsaavvtqdgiysiskdvnkawlfttpppapflvvhsssTMqhlswrtpvtldnrrihvrygpnlfivrpevvrkalsiadrvnegqkkwvtpvYfdrkaaamghglitragaemltqeeqeffqsvtpgerwalsylmhskrpepevgecitekvmtsln/vnlkvtidlsnpmmepgdllhldallgalrvsraraehgdainprdyhydlpleryqapsgdwvfkasafklkrqlpnqmwmqtgRlsiveaarhrqsgylqlRagkpNpAggpfkTsIyhrpivqaeltafcvgdqqgieallsecrqiggkrgvgfgqvagfkvepvaetdcpwswralpadadprlvtseharciaairgpywdrtlhvealaptp/mqievtvrnitpifsaapgsNYitidgTINpPPgvSrFPlvRtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnpdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskaaaskkkngRglKAFNahEvvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqs/mqievtvrnitpifsaapgsnyitidgtiNpppgvsrFPlvRtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwaRRmdpilnlgssedvevinggavaangwiqdllanskaAasKkkgRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsake >7xg4_EFGH: title=CRYOEM STRUCTURE OF TYPE IV-A CASDING BOUND NTS-NICKED CSF-CRRNA- DSDNA QUATERNARY COMPLEX IN A SECOND STATE organism=? DNA sequence DT(K51) DG(K50) DG(K49) DG(K48) DA(K47) DA(K46) DA(K45) DG(K44) DA(K43) DC(K42) DC(K41) DT(K40) DC(K39) DG(K38) DT(K37) DT(K36) DG(K35) DT(K34) DG(K33) DG(K32) DA(K31) DC(K30) DT(K29) DT(K28) DC(K27) DC(K26) DT(K25) DT(K24) DC(K23) DC(K22) DG(K21) DA(K20) DA(K16) DT(K17) DC(K18) DA(K19):DA(K20) chainE ( 36) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 0 0 0 0 0 0 0 0 0 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) MET139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (220) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (224) ALA245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (225) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (226) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) ILE25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 36) SER36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 10 ( 38) PHE38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 16 ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 (139) MET139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (224) ALA245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (225) PHE246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 (226) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 chainG ( 39) PRO39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (111) PRO111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 (139) MET139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (181) ASN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 chainH (106) ARG106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (229) LEU229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (233) GLN233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 prot.sequence mqievtvrnitpifsaapgsnyitidgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskangRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa/mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskangrglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa/mqievtvrnitpifsaapgsnyitidgtinpppgvsrfPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwafNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak/mfvkqvffdlgarihadearalvakllddtqpglvsalmnympasktsktefplvqfsnfnqgfallgfgevgaqilsdatpiihdamaklfasrgqgvvvqvssRdvplscekrpyglqytvakmvvqkkhehrerlanpetgkvfleglflrslerqaaavgmvlprdlvvsfkgaervssvklrpdstlahgslrhavfevnarlgglwsvgfllskgfghintdLqlgQg >7xht_A: title=STRUCTURE OF THE OGEUISCB-OMEGA RNA-TARGET DNA COMPLEX organism=? DNA sequence DA(C-11):DT(D11) DT(C-10):DA(D10) DG(C-9):DC(D9) DG(C-8):DC(D8) DT(C-7):DA(D7) DT(C-6):DA(D6) DT(C-5):DA(D5) DT(C-4):DA(D4) DC(C-3):DG(D3) DT(C-2):DA(D2) DT(C-1):DA(D1) DC(C0):DG(D0) chainA (280) HIS380 0 0 0 0 0 0 0 0 0 0 9 5 (281) LYS381 0 0 0 0 0 0 0 0 0 2 5 4 (360) GLU460 0 0 0 0 0 0 0 1 5 1 0 0 (363) ASN463 0 0 0 0 0 1 0 0 0 0 0 0 (368) ASN468 0 0 0 0 0 0 3 0 0 0 0 0 (369) TYR469 0 0 0 0 0 0 9 3 0 0 0 0 (377) LYS477 0 0 0 0 0 0 0 1 0 0 0 0 (379) TRP479 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence avvyvisksgkplmpttrcghvrillkegkarvverkpftiqltyesaeetqplvlgidpgrtnigmsvvtesgesvfnaqietrnkdvpklmkdrkqyrmahrrlkrrckrrrrakaagtafeegekqrllpgcfkpitcksirnkearfnnrkrpvgwltptanhllvthlnvvkkvqkilpvakvvlelnrfslsvlnqiipyladqladmfpgnfcvtsgqdtylfreehgipkdhyldayciacsaltdakkvsspkgrpymvhqfrrhdrqacHKanlnrsyymggklvatnrhkamdqktdsleeyraahsaadvskltvkhpsaqykdmsrimpgsilvsgegklftlsrsEgrNkgqvNYfvstegiKyWarkcqylrnngglqiy >7xhv_AB:HLH,_helix-loop-helix_DNA-binding_domain;PYP-like_sensor_domain_PAS_domain; title=CRYSTAL STRUCTURE OF THE NPAS4-ARNT HETERODIMER IN COMPLEX WITH DNA organism=? DNA sequence DA(D3):DT(C16) DT(D4):DA(C15) DC(D5):DG(C14) DA(D6):DT(C13) DC(D7):DG(C12) DT(D8):DA(C11) DC(D9):DG(C10) DA(D10):DT(C9) DC(D11):DG(C8) DG(D12):DC(C7) DA(D13):DT(C6) DC(D14):DG(C5) DC(D15):DG(C4) DT(D16):DA(C3) chainA ( 10) HIS94 0 0 0 0 1 8 7 9 0 0 0 0 0 0 ( 13) ILE97 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 14) GLU98 0 0 0 0 0 2 10 10 0 0 0 0 0 0 ( 17) ARG101 0 0 0 0 0 4 8 0 0 0 0 0 0 0 ( 18) ARG102 0 0 0 0 0 0 0 0 8 12 0 0 0 0 chainB ( 3) THR5 0 0 0 0 0 0 0 0 0 0 2 5 0 0 ( 7) SER9 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 10) ARG12 0 0 0 0 0 0 0 0 0 0 0 1 4 0 ( 11) ARG13 0 0 0 0 0 0 0 0 13 8 0 0 0 0 prot.sequence dkerlarenHseIErrRRnkmtayitelsdmvptcsaarkpdkltilrmavshmkslrgpsfltdqelkhlileaadgflfivscetgrvvyvsdsvtpvlnqpqsewfgstlydqvhpddvdklreqlstsgsrrsficrmrcgtssvfvvvhctgyikawppagfclvaigrlqv/rsTkgaSkaRRdqinaeirnlkellplaeadkvrlsylhimslaciytrkgvffaggtplagptgllsaqeledivaalpgfllvftaegkllylsesvsehlghsmvdlvaqgdsiydiidpadhltvrqqltmpsaldadrlfrcrfntskslrrgnklvlirgrfhahppgaywagnpvftafcaplep >7xhv_B:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE NPAS4-ARNT HETERODIMER IN COMPLEX WITH DNA organism=? DNA sequence DA(C3):DT(D16) DG(C4):DC(D15) DG(C5):DC(D14) DT(C6):DA(D13) DC(C7):DG(D12) DG(C8):DC(D11) DT(C9):DA(D10) DG(C10):DC(D9) DA(C11):DT(D8) DG(C12):DC(D7) DT(C13):DA(D6) DG(C14):DC(D5) DA(C15):DT(D4) DT(C16):DA(D3) chainB ( 3) THR5 0 0 5 2 0 0 0 0 0 0 0 0 0 0 ( 7) SER9 0 0 1 1 0 0 0 0 0 0 0 0 0 0 ( 10) ARG12 0 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG13 0 0 0 0 8 13 0 0 0 0 0 0 0 0 prot.sequence rsTkgaSkaRRdqinaeirnlkellplaeadkvrlsylhimslaciytrkgvffaggtplagptgllsaqeledivaalpgfllvftaegkllylsesvsehlghsmvdlvaqgdsiydiidpadhltvrqqltmpsaldadrlfrcrfntskslrrgnklvlirgrfhahppgaywagnpvftafcaplep >7xi3_A:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE NPAS4-ARNT2 HETERODIMER IN COMPLEX WITH DNA organism=? DNA sequence DT(D8):DA(C15) DC(D9):DG(C14) DA(D10):DT(C13) DC(D11):DG(C12) DG(D12):DA(C11) DA(D13):DT(C9) DC(D14):DG(C8) DC(D15):DC(C7) DT(D16):DT(C6) chainA ( 8) HIS68 4 0 0 0 5 8 0 0 0 ( 9) SER69 0 0 0 0 0 1 0 0 0 ( 11) ILE71 1 0 0 0 0 0 0 0 0 ( 12) GLU72 2 10 5 0 0 7 1 0 0 ( 15) ARG75 4 4 0 0 0 0 0 0 0 ( 16) ARG76 0 0 0 0 0 0 7 8 0 prot.sequence skfsrenHSeIErrRRnkmtqyitelsdmvptcsalarkpdkltilrmavshmksmrgkpsflteqelkhlileaadgflfvvaaetgrviyvsdsvtpvlnqpqsewfgstlyeqvhpddveklreqlctsenmgsrrsficrmrcgnaqyavvhctgyikawpgskyclvaigrlqvtspteflsrhnsdgiitfvdprcisvigyqpqdllgkdilefchpedqshlresfqqvvklkgqvlsvmyrfrtknrewllirtssftfqnpysdeieyvtctntnvk >7xi3_AB:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE NPAS4-ARNT2 HETERODIMER IN COMPLEX WITH DNA organism=? DNA sequence DT(D8):DA(C15) DC(D9):DG(C14) DA(D10):DT(C13) DC(D11):DG(C12) DG(D12):DA(C11) DA(D13):DT(C9) DC(D14):DG(C8) DC(D15):DC(C7) DT(D16):DT(C6) chainA ( 8) HIS68 4 0 0 0 5 8 0 0 0 ( 9) SER69 0 0 0 0 0 1 0 0 0 ( 11) ILE71 1 0 0 0 0 0 0 0 0 ( 12) GLU72 2 10 5 0 0 7 1 0 0 ( 15) ARG75 4 4 0 0 0 0 0 0 0 ( 16) ARG76 0 0 0 0 0 0 7 8 0 chainB ( 3) THR5 0 0 0 0 0 5 5 0 0 ( 7) SER9 0 0 0 0 0 1 0 0 1 ( 11) ARG13 0 0 0 10 7 0 0 0 0 prot.sequence skfsrenHSeIErrRRnkmtqyitelsdmvptcsalarkpdkltilrmavshmksmrgkpsflteqelkhlileaadgflfvvaaetgrviyvsdsvtpvlnqpqsewfgstlyeqvhpddveklreqlctsenmgsrrsficrmrcgnaqyavvhctgyikawpgskyclvaigrlqvtspteflsrhnsdgiitfvdprcisvigyqpqdllgkdilefchpedqshlresfqqvvklkgqvlsvmyrfrtknrewllirtssftfqnpysdeieyvtctntnvk/rsTkgaSkarRdqinaeirnlkellplaeadkvrlsylhimslaciytrkgvffaggtplagptgllsaqeledivaalpgfllvftaegkllylsesvsehlghsmvdlvaqgdsiydiidpadhltvrqqltmldadrlfrcrfntskslrrqssgnklvlirgrfhahppgaywagnpvftafcapleplflamfqsrhakdlalldvsesvliylgfersellckswygllhpedlaqassqhyrllaesgdiqaemvvrlqakhggwtwiycmlysegpegpitannypisdteawslrqqlnsedtqa >7xi3_B:PYP-like_sensor_domain_PAS_domain; title=CRYSTAL STRUCTURE OF THE NPAS4-ARNT2 HETERODIMER IN COMPLEX WITH DNA organism=? DNA sequence DT(D8):DA(C15) DC(D9):DG(C14) DA(D10):DT(C13) DC(D11):DG(C12) DG(D12):DA(C11) DA(D13):DT(C9) DC(D14):DG(C8) DC(D15):DC(C7) DT(D16):DT(C6) chainB ( 3) THR5 0 0 0 0 0 5 5 0 0 ( 7) SER9 0 0 0 0 0 1 0 0 1 ( 11) ARG13 0 0 0 10 7 0 0 0 0 prot.sequence rsTkgaSkarRdqinaeirnlkellplaeadkvrlsylhimslaciytrkgvffaggtplagptgllsaqeledivaalpgfllvftaegkllylsesvsehlghsmvdlvaqgdsiydiidpadhltvrqqltmldadrlfrcrfntskslrrqssgnklvlirgrfhahppgaywagnpvftafcapleplflamfqsrhakdlalldvsesvliylgfersellckswygllhpedlaqassqhyrllaesgdiqaemvvrlqakhggwtwiycmlysegpegpitannypisdteawslrqqlnsedtqa >7xi4_A:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE NPAS4-ARNT HETERODIMER IN COMPLEX WITH DNA organism=? DNA sequence DA(C3):DT(D16) DG(C4):DC(D15) DG(C5):DC(D14) DT(C6):DA(D13) DC(C7):DG(D12) DG(C8):DC(D11) DT(C9):DA(D10) DG(C10):DC(D9) DA(C11):DT(D8) DT(C13):DA(D6) DG(C14):DC(D5) DT(C16):DA(D3) chainA ( 13) HIS94 0 0 0 0 0 0 6 4 2 0 0 0 ( 17) GLU98 0 0 0 0 0 5 15 3 0 0 0 0 ( 20) ARG101 0 0 0 0 0 0 0 1 1 0 0 0 ( 21) ARG102 0 0 0 0 6 6 0 0 0 0 0 0 prot.sequence ssadkerlarenHseiErrRRnkmtayitelsdmvptcsalarkpdkltilrmavshmkslrgtgnkpsfltdqelkhlileaadgflfivscetgrvvyvsdsvtpvlnqpqsewfgstlydqvhpddvdklreqlstsgsrrsficrmrcgtssfvvvhctgyikafclvaigrlqvtefisrhniegiftfvdhrcvatvgyqpqellgknivefchpedqqllrdsfqqvvklkgqvlsvmfrfrsktrewlwmrtssftfqnpysdeieyiictntnv >7xi4_AB:PYP-like_sensor_domain_PAS_domain;HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE NPAS4-ARNT HETERODIMER IN COMPLEX WITH DNA organism=? DNA sequence DA(C3):DT(D16) DG(C4):DC(D15) DG(C5):DC(D14) DT(C6):DA(D13) DC(C7):DG(D12) DG(C8):DC(D11) DT(C9):DA(D10) DG(C10):DC(D9) DA(C11):DT(D8) DT(C13):DA(D6) DG(C14):DC(D5) DT(C16):DA(D3) chainA ( 13) HIS94 0 0 0 0 0 0 6 4 2 0 0 0 ( 17) GLU98 0 0 0 0 0 5 15 3 0 0 0 0 ( 20) ARG101 0 0 0 0 0 0 0 1 1 0 0 0 ( 21) ARG102 0 0 0 0 6 6 0 0 0 0 0 0 chainB ( 2) THR5 0 0 7 5 0 0 0 0 0 0 0 0 ( 6) SER9 0 0 2 2 0 0 0 0 0 0 0 0 ( 9) ARG12 0 4 0 0 0 0 0 0 0 0 0 0 ( 10) ARG13 0 0 0 0 8 14 0 0 0 0 0 0 prot.sequence ssadkerlarenHseiErrRRnkmtayitelsdmvptcsalarkpdkltilrmavshmkslrgtgnkpsfltdqelkhlileaadgflfivscetgrvvyvsdsvtpvlnqpqsewfgstlydqvhpddvdklreqlstsgsrrsficrmrcgtssfvvvhctgyikafclvaigrlqvtefisrhniegiftfvdhrcvatvgyqpqellgknivefchpedqqllrdsfqqvvklkgqvlsvmfrfrsktrewlwmrtssftfqnpysdeieyiictntnv/sTkgaSkaRRdqinaeirnlkellplaeadkvrlsylhimslaciytrkgvffaggtplagptgllsaqeledivaalpgfllvftaegkllylsesvsehlghsmvdlvaqgdsiydiidpadhltvrqqltmpsaldadrlfrcrfntskgnklvlirgrfhahppgaywagnpvftafcaplepamfqsrhakdlalldvsesvliylgfersellckswygllhpedlaqassqhyrllaesgdiqaemvvrlqakhggwtwiycmlysegpegpitannypisdteawslrqqlnsedtqa >7xi9_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF HUMAN DNMT1 (AA:351-1616) IN COMPLEX WITH UBIQUITINATED H3 AND HEMIMETHYLATED DNA ANALOG (CXXC-ORDERED FORM) organism=? DNA sequence DC(C13):DG(B12) DC(C14):DG(B11) DT(C15):DA(B10) DT(C16):DA(B9) DC(C17):DG(B8) DG(C19):DG(B7) DT(C20):DA(B5) DA(C21):DT(B4) DA(C22):DT(B3) DG(C23):DC(B2) DT(C24):DA(B1) chainA (271) LYS981 0 0 0 0 2 0 0 0 0 0 0 (492) MET1232 0 0 0 0 4 7 0 0 0 0 0 (494) ARG1234 0 0 0 0 0 19 2 0 0 0 0 (495) PHE1235 0 0 0 0 0 0 4 0 0 0 0 (496) ASN1236 0 0 0 0 0 1 0 0 0 0 0 (597) ARG1337 0 1 1 0 0 0 0 0 0 0 0 (767) HIS1507 0 0 0 0 2 5 0 0 0 0 0 (768) ASN1508 0 0 8 2 0 0 0 0 0 0 0 (791) GLU1531 0 0 0 0 0 0 0 3 0 0 0 (795) LYS1535 0 0 0 0 9 10 0 0 0 0 0 (796) GLN1536 0 0 0 0 2 0 0 0 0 0 0 prot.sequence gptkatttklvyqifdtffaeqiekdrcgvcevcqqpecgkckackdmvkfggsgrskqacqerrcpnmamtlevgdcvsvipddsskplylarvtalwedssngqmfhahwfcagtdtvlgatsdplelflvdecedmqlsyihskvkviykapsenwameggmgktyfyqlwydqdyarfesppktqpkfcvscarlaemrqkeiprvleqledldsrvlyysatkngilyrvgdgvylppeaftfniklpvdedlypehyrkysdyiKgsnldapepyrigrikeifcpkksngrpnetdikirvnkfyrpenthkstpasyhadinllywsdeeavvdfkavqgrctveygedlpecvqvysmggpnrfyfleaynaksksfedppnharslpklrtldvfsgcgglsegfhqagisdtlwaiemwdpaaqafrlnnpgstvftedcnillklvmagettnsrgqrlpqkgdvemlcggppcqgfsgMnRFNsrtyskfknslvvsflsycdyyrprffllenvrnfvsfkrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapRacqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpevrngasaleisyngepqswfqrqlrgaqyqpilrdhickdmsalvaarmrhiplapgsdwrdlpnievrlsdgtmarklrythhdrkngrsssgalrgvcscveagkacdpaarqfntlipwclphtgnrHNhwaglygrlewdgffsttvtnpEpmgKQgrvlhpeqhrvvsvrecarsqgfpdtyrlfgnildkhrqvgnavppplakaigleiklcmlakaresasakik >7xib_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF HUMAN DNMT1 (AA:351-1616) IN COMPLEX WITH UBIQUITINATED H3 AND HEMIMETHYLATED DNA ANALOG (CXXC-DISORDERED FORM) organism=? DNA sequence DA(B1):DT(C24) DC(B2):DG(C23) DT(B3):DA(C22) DT(B4):DA(C21) DA(B5):DT(C20) DG(B7):DG(C19) DG(B8):DC(C17) DA(B9):DT(C16) DA(B10):DT(C15) DG(B11):DC(C14) DG(B12):DC(C13) chainA (217) LYS981 0 0 0 0 0 0 2 0 0 0 0 (438) MET1232 0 0 0 0 0 6 4 0 0 0 0 (440) ARG1234 0 0 0 0 5 18 0 0 0 0 0 (441) PHE1235 0 0 0 0 4 0 0 0 0 0 0 (442) ASN1236 0 0 0 0 0 1 0 0 0 0 0 (543) ARG1337 0 0 0 0 0 0 0 0 1 1 0 (713) HIS1507 0 0 0 0 0 6 2 0 0 0 0 (714) ASN1508 0 0 0 0 0 0 0 2 6 0 0 (737) GLU1531 0 0 0 2 0 0 0 0 0 0 0 (741) LYS1535 0 0 0 0 0 15 6 0 0 0 0 (742) GLN1536 0 0 0 0 0 0 4 0 0 0 0 prot.sequence gptkatttklvyqifdtffaeqielevgdcvsviplylarvtalwedssngqmfhahwfcagtdtvlgatsdplelflvdecedmqlsyihskvkviykapsenwameggmgktyfyqlwydqdyarfesppktqpkfcvscarlaemrqkeiprvleqledldsrvlyysatkngilyrvgdgvylppeaftfniklpvdedlypehyrkysdyiKgsnldapepyrigrikeifcpkksngrpnetdikirvnkfyrpenthkstpasyhadinllywsdeeavvdfkavqgrctveygedlpecvqvysmggpnrfyfleaynaksksfedppnharslpklrtldvfsgcgglsegfhqagisdtlwaiemwdpaaqafrlnnpgstvftedcnillklvmagettnsrgqrlpqkgdvemlcggppcqgfsgMnRFNsrtyskfknslvvsflsycdyyrprffllenvrnfvsfkrsmvlkltlrclvrmgyqctfgvlqagqygvaqtrrraiilaaapgeklplfpeplhvfapRacqlsvvvddkkfvsnitrlssgpfrtitvrdtmsdlpevrngasaleisyngepqswfqrqlrgaqyqpilrdhickdmsalvaarmrhiplapgsdwrdlpnievrlsdgtmarklrythhdrkngrsssgalrgvcscveagkacdpaarqfntlipwclphtgnrHNhwaglygrlewdgffsttvtnpEpmgKQgrvlhpeqhrvvsvrecarsqgfpdtyrlfgnildkhrqvgnavppplakaigleiklcmlakaresasakik >7xjg_C: title=CRYO-EM STRUCTURE OF E.COLI RETRON-EC86 IN COMPLEX WITH ITS EFFECTOR AT 2.5 ANGSTROM organism=? DNA sequence DA(G84) DC(G83) DT(G82) DC(G81) DA(G80) DA(G79) DT(G78) DG(G77) DA(G76) DC(G75) DA(G74) DG(G73) DA(G72) DC(G71) DA(G70) DA(G69) DA(G68) DA(G67) DG(G66) DC(G19) DT(G18) DT(G17) DT(G16) DG(G15) DG(G14) DG(G13) DC(G12) DA(G11) DA(G10) DA(G9) DA(G8) DA(G7) DA(G6) DG(G5) DA(G4) DC(G3) DG(G1) DT(G2):DC(G3) chainC (130) TYR304 0 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnkkftdeqqqqlighltkkgfyrgailyaerfllpciylldsvnyrtlcelafkaikdvlskiivrsvvsrlinerkilqmtdgyqvtalgasyvrsvfdrktldrlrleimnfenrrkstfnydkipYah >7xlt_HL:Immunoglobulin; title=CRYO-EM STRUCTURE OF R-LOOP MONOCLONAL ANTIBODY S9.6 IN RECOGNIZING RNA:DNA HYBRIDS organism=MUS MUSCULUS DNA sequence DT(A1) DC(A2) DT(A3) DG(A4) DT(A5) DT(A6) DC(A7) DT(A8) DT(A9) DC(A10) DG(A11) DT(A12) DG(A13) DT(A14) DT(A15) DC(A16) DC(A17) DT(A18) DC(A19) DG(A20) DT(A21) DC(A22) DT(A23) DG(A24) DT(A25) DT(A26) DC(A27) DT(A28) DT(A29) DC(A30) DG(A31) DT(A32) DG(A33) DT(A34) DT(A35) DC(A36) DC(A37) DT(A38) DC(A39) DG(A40) chainH ( 54) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) TYR101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL prot.sequence evqlqqsgpelvkpgasvkmsckasgytftsyvmhwvkqkpgqglewigfinlYndgtkynekfkgkatltsdkssstaymelssltskdsavyycardyYgsrwfdywgqgttltvssakttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsdlytlsssvtvtsstwpsqsitcnvahpasstkvdkk/dvlmtqtplslpvslgdqasiscrssqsivhsngntylewylqkpgqspklliYkvsnrfsgvpdrfsgsgsgtdftlkisrveaedlgvyycfqgshvpYtfgggtkleikradaaptvsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltltkdeyerhnsytceathktstspivksfnr >7xm0_BC: title=CRYSTAL STRUCTURE OF SAU3AI-C AND DNA SUBSTRATE COMPLEX organism=? DNA sequence DC(G1):DG(F10) DA(G2):DT(F9) DT(G3):DA(F8) DG(G4):DC(F7) DA(G5):DT(F6) DT(G6):DA(F5) DC(G7):DG(F4) DA(G8):DT(F3) DT(G9):DA(F2) DG(G10):DC(F1) DC(I1):DG(H10) DA(I2):DT(H9) DT(I3):DA(H8) DG(I4):DC(H7) DA(I5):DT(H6) DT(I6):DA(H5) DC(I7):DG(H4) DA(I8):DT(H3) DT(I9):DA(H2) DG(I10):DC(H1) chainB ( 31) GLU266 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LYS267 0 0 0 0 7 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG272 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLU316 0 0 0 10 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) SER319 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) LYS423 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ARG432 0 0 12 16 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) PRO433 0 0 0 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) HIS434 0 0 0 0 0 13 10 4 0 0 0 0 0 0 0 0 0 0 0 0 (201) ASN436 0 0 0 0 0 0 0 5 11 2 0 0 0 0 0 0 0 0 0 0 (240) TRP475 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 32) LYS267 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 7 0 0 0 0 ( 81) GLU316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 2 0 0 ( 84) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (175) ARG415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 (192) ARG432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 17 8 0 0 (193) PRO433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 3 0 0 0 (194) HIS434 0 0 0 0 0 0 0 0 0 0 0 0 5 11 12 0 0 0 0 0 (195) THR435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (196) ASN436 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 (235) TRP475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 prot.sequence siedivfekfqpyinwsidklcehfsinkgEKglnyRiasailnlkgkttkskpfpeveefekssivvktvhfnkknvnkEsmSfgafkfeelaneewedsegypsaqwrnflletrflffvvkededgvdifkgikffsmpeedingpvkrmwddtvkklkegvtleavpdkstkdgwriknnfvdKsddlichvRPHtNnrdyrggsnadklpkkinwinrpdsddysdewmtkqsfWinndyikkqvedll/siedivfekfqpyinwsidklcehfsinkgeKglnyriasailnlkgkttkskpfpeveefekssivvktvhfnkknvnkEsmSfgafkfeelaneewepsaqwrnflletrflffvvkededgvdifkgikffsmpeedingpvkrmwddtvkklkegvtleavpdkstkdgwRiknnfvdksddlichvRPHTNnrdyrggsnadklpkkinwinrpdsddysdewmtkqsfWinndyikkqvedll >7xm0_C:Restriction_endonuclease-like; title=CRYSTAL STRUCTURE OF SAU3AI-C AND DNA SUBSTRATE COMPLEX organism=? DNA sequence DC(G1):DG(F10) DA(G2):DT(F9) DT(G3):DA(F8) DG(G4):DC(F7) DA(G5):DT(F6) DT(G6):DA(F5) DC(G7):DG(F4) DA(G8):DT(F3) DT(G9):DA(F2) DG(G10):DC(F1) DC(I1):DG(H10) DA(I2):DT(H9) DT(I3):DA(H8) DG(I4):DC(H7) DA(I5):DT(H6) DT(I6):DA(H5) DC(I7):DG(H4) DA(I8):DT(H3) DT(I9):DA(H2) DG(I10):DC(H1) chainC ( 32) LYS267 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 7 0 0 0 0 ( 81) GLU316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 10 2 0 0 ( 84) SER319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (175) ARG415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 (192) ARG432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 17 8 0 0 (193) PRO433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 3 0 0 0 (194) HIS434 0 0 0 0 0 0 0 0 0 0 0 0 5 11 12 0 0 0 0 0 (195) THR435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (196) ASN436 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 (235) TRP475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 prot.sequence siedivfekfqpyinwsidklcehfsinkgeKglnyriasailnlkgkttkskpfpeveefekssivvktvhfnkknvnkEsmSfgafkfeelaneewepsaqwrnflletrflffvvkededgvdifkgikffsmpeedingpvkrmwddtvkklkegvtleavpdkstkdgwRiknnfvdksddlichvRPHTNnrdyrggsnadklpkkinwinrpdsddysdewmtkqsfWinndyikkqvedll >7xn7_ABEW: title=RNA POLYMERASE II ELONGATION COMPLEX CONTAINING SPT4/5, ELF1, SPT6, SPN1 AND PAF1C organism=? DNA sequence DT(N-61):DA(T50) DT(N-60):DC(T49) DT(N-59):DG(T48) DC(N-58):DG(T47) DT(N-57):DA(T46) DG(N-56):DC(T45) DT(N-55):DC(T44) DC(N-54):DA(T43) DT(N-53):DC(T42) DC(N-52):DA(T41) DG(N-51):DG(T40) DT(N-50):DA(T39) DG(N-49):DA(T38) DC(N-48):DC(T37) DC(N-47):DC(T36) DT(N-46):DC(T35) DG(N-45):DA(T34) DG(N-44):DC(T33) DT(N-43):DA(T32) DA(N-31):DT(T31) DA(N-30):DT(T30) DT(N-29):DA(T29) DC(N-28):DG(T28) DC(N-27):DG(T27) DC(N-26):DG(T26) DC(N-25):DG(T25) DT(N-24):DA(T24) DT(N-23):DA(T23) DG(N-22):DC(T22) DG(N-21):DC(T21) DC(N-20):DG(T20) DG(N-19):DC(T19) DG(N-18):DC(T18) DT(N-17):DA(T17) DT(N-16):DA(T16) DA(N-15):DT(T15) DA(N-14):DT(T14) DA(N-13):DT(T13) DA(N-12):DT(T12) DC(N-11):DG(T11) DG(N-10):DC(T10) DC(N-9):DG(T9) chainA (239) MET253 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) LYS318 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (435) PRO449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (818) THR832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (819) ALA833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1338) ARG1389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (462) ASP498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainW prot.sequence sqfpyssaplrsvkevqfgllspeeiraisvvkieypeimdesrqrpregglndpklgsidrnfkcqtcgegmaecpghfghmelakpvfhigfipkikkvcecicmncgkllldetnptmaqairirdpkkrfnavwqlcktkmvceadapvsrggcgntqpvvrkdgmklwgtwkksrdaqperklltpgeilnvfkhispedcfrlgfnedyarpewmiitvlpvpppqvrpsiaMdettqgqddlthklsdilkaninvqklemdgspqhiineveqllqfhvatymdndiagqpqalqKsgrpvkairarlkgkegrlrgnlmgkrvdfsartvisgdpnleldqvgvpisiaktlsypetvtqynihrlteyvrngpnehpgakyvirdngdridlryhkragdivlqygwkverhlmdddpvlfnrqPslhkmsmmahrvkvmpystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpvmgivqdtlcgvrkmtlrdtfieyeqvmnmlfwvpswdgvvpqpailkpkplwtgkqllsiaipsgihlqrtdggnsllspkdngmlivdgkvmfgvvdkktvgsgggglihtvmrekgpkicaelfgniqkvvnywllhngfsigigdaiadastmkeithaissakeqvqeiiykaqhnelelkpgmtlresfegevsrtlndardsagrsaemnlkdlnnvkqmvsagskgsfiniaqmsacvgqqmvegkriafgfadrslphftkddfspeskgfvensylrgltpqefffhamagreglidtavkTAetgyiqrrlvkaledimvhydgttrnslgdiiqflygedgldgtqverqtidtipgsdkafhkryyvdlmdeknsikpdvieyaadilgdvelqkelnseyeqlvsdrkflreivfvngdhnwplpvnlrriiqnaqqifhldrakasdltipeiihgvrdlckklfvlrgenelikeaqqnatslfqclvrarlatrrileefrlnrdafewvlgtieaqfqrslvhpgemvgviaaqsigepatqmnvtlgvprlkeilnvakniktpaltvyldreialdiekakviqssieyttlknvtsateiyydpdptstvieedfdtveayfsqspwllrleldrarmldkqltmnqvadkisevfsddlfvmwsednadkliircrvieedqmlkrieahmldlialrgipgiskvymvkhkvsvpdesgeykneelwaletdginlaevmavpgvdssrtysnsfveilsvlgieatrsslykeilnviafdgsyvnyrhmallvdvmtsrgylmaitRhginradtgalmrcsfeetveilfeagaaaelddcrgvsenvmlgqlapmgtgafdvmidekllts/ddtittedcwtvisaffeekglvsqqldsfdefmetsiqdlvweeprlildqpaqhdninkryeirfgkiylsrptmteadgtthamfpqearlrnltysspvyldmeksmftsidgnkvhigkvpimlrskfcslrtldevdlykmkecpydmggyfvingsekvliaqersaanivqvfkkaapspishvaeirsalekgsrlistmqiklygredkgtgrtikatlpyvkqdipivivfralgvvpdgeilqhicydendwqmlemlkpcieegfviqdkevaldfigrrgsaalgirrekriqyakdilqkellphitqeegfetrktfflgymvnrlllcalerkdqddrdhfgkkrldlagpllanlfrilfrkltreiyrymqrcietdrdfnlnlavksttitsglkyslatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpigrDgklakprqlhnthwglvcpaetpegqacglvknlsllsgisigspsepiinfleewgmepledydpaqhtkstrifvngvwtgihrdpsmlvstmrdlrrsgaispevsiirdirerefkiftdvgrvyrplfiveddeskdnkgelritkehirkiqqgydddvygwsslvtsgvieyvdgeeeetimiamtpedlqtndtakrikpemstsshhtfthceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyypqkplaktqameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsymdqekrfgisiveefekptrattlrlkhgtyekldedgliapgvrvsgddiiigkttpippdteelgqrtkyhtkrdastplrstengivdqvllttnqeglkfvkvrmrttkvpqigdkfasrhgqkgtigvtyrhedmpfsaegivpdliinphaipsrmtvahliecllskvgsirgyegdatpftdltvdavsnllrdngyqsrgfevmynghtgkklmaqvffgptyyqrlrhmvddkiharargpvqvltrqpvegrsrdgglrfgemerdcmiahgaagflkerlmeasdafrvhvcgicglmsvianlkknqfecrscknktniyqlhipyaakllfqelmamniaprlytersg/ednnriisrlwrsfrtvkemaadrgyfisqeemdqsleefrskicdsmgnpqrklmsflanptpealekysdlgtlwvefcdepsvgiktmrnfclriqeknfstgifiyqnnitpsankmiptvspaiietfqesdlvvnithhelvpkhirlsdgeksqllqryklkesqlpriqredpvarylglkrgqvvkiirrsetsgryasyricl/pqrlliptvddpgiwgvkvrlgkekdvvrqilkkklaregtknpleiysafqrdsfkghvyiearkaeaindalkgnvnvfsnnskflvgiveykdllrpvkssdvkltrgsyvrvkngkfkgdlaqvdevlenglearlklvprldygfrpaqrlfseaearvheptirrdrdgfvtyggeeyyegflyktfrlqnlivnsinptlnelslfqsneesttidlstiadslketaknlvsfqpgdnveiingelnhltgtvssvnqstivsvrlhsdddtinsetveiptsdlrkifnvgdhvrvihgkhtddtglivevngdkvefisnqtkrtvivfsnylikstdstvsinesgrfelhdlvqvnsdlvgiviraqkdsfdvlcsdgkllslppvsiysklnlnpnqqiaidsngvevkvgdtvreftgerrqgtilhvyrnflflrsreivenqgvfVtssnrvktirdptlnktvkirqggykgkigivkeangdrfrvelhnpnktipipcsflliesthgwvpyed >7xnp_A:Histone-fold; title=STRUCTURE OF NUCLEOSOME-AAG COMPLEX (A-55I, POST-CATALYTIC STATE) organism=? DNA sequence DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge >7xnp_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF NUCLEOSOME-AAG COMPLEX (A-55I, POST-CATALYTIC STATE) organism=? DNA sequence DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 23) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/rkesyaiyvykvlkqvhpdtgisskamsImnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/pgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/RkesyaiyvykvlkqvhpdtgisskamsimnSfvndvferiageasrlahynkrstitsreiqtavRlllpgelakhavsegtkavtkytsa >7xp3_AB:NAC_domain; title=DNA COMPLEX FORM OF ORESARA1(ANAC092) NAC DOMAIN organism=? DNA sequence DG(E2):DC(F44) DT(E3):DA(F43) DT(E4):DA(F42) DA(E5):DT(F41) DC(E6):DG(F40) DG(E7):DC(F39) DT(E8):DA(F38) DA(E9):DT(F37) DC(E10):DG(F36) DG(E11):DC(F35) DG(E12):DC(F34) DC(E13):DG(F33) DA(E14):DT(F32) DC(E15):DG(F31) DA(E16):DT(F30) DC(E17):DG(F29) DG(E18):DC(F28) DT(E19):DA(F27) DA(E20):DT(F26) DA(E21):DT(F25) DC(E22):DG(F24) chainA ( 69) TYR86 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG91 7 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) LYS102 0 0 0 5 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) THR104 0 0 0 0 0 2 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) TYR126 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) PRO131 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 64) TYR86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 ( 69) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 3 ( 80) LYS102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 3 0 0 0 ( 82) THR104 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 2 0 0 0 0 0 ( 84) LYS106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (104) TYR126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (109) PRO131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (110) LYS132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 prot.sequence idlppgfrfhptdeelithylkpkvfntffsataigevdlnkiepwdlpwkakmgekewyffcvrdrkYptglRtnrateagywKaTgkdkeifkgkslvgmkktlvfYkgraPkgvktnwvmheyrlegkycienlpqtaknewvicrvfqk/dlppgfrfhptdeelithylkpkvfntfftaigevdlnkiepwdlpwkmgekewyffcvrdrkYptglRtnrateagywKaTgKdkeifkgkslvgmkktlvfYkgraPKgvktnwvmheyrlegkycienlpqtaknewvicrvfqk >7xp3_B:NAC_domain; title=DNA COMPLEX FORM OF ORESARA1(ANAC092) NAC DOMAIN organism=? DNA sequence DG(F24):DC(E22) DT(F25):DA(E21) DT(F26):DA(E20) DA(F27):DT(E19) DC(F28):DG(E18) DG(F29):DC(E17) DT(F30):DA(E16) DG(F31):DC(E15) DT(F32):DA(E14) DG(F33):DC(E13) DC(F34):DG(E12) DC(F35):DG(E11) DG(F36):DC(E10) DT(F37):DA(E9) DA(F38):DT(E8) DC(F39):DG(E7) DG(F40):DC(E6) DT(F41):DA(E5) DA(F42):DT(E4) DA(F43):DT(E3) DC(F44):DG(E2) chainB ( 64) TYR86 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ARG91 3 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) LYS102 0 0 0 3 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) THR104 0 0 0 0 0 2 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) LYS106 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) TYR126 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) PRO131 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) LYS132 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dlppgfrfhptdeelithylkpkvfntfftaigevdlnkiepwdlpwkmgekewyffcvrdrkYptglRtnrateagywKaTgKdkeifkgkslvgmkktlvfYkgraPKgvktnwvmheyrlegkycienlpqtaknewvicrvfqk >7xpx_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE HISTONE METHYLTRANSFERASE SET8 BOUND TO H4K20ECX-NUCLEOSOME organism=XENOPUS LAEVIS DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DG(J68):DC(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 6) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainB ( 28) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 12) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence kkphrYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/rhrvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/Rktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqFpvgrvhrllRkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/rrktrkesyaiYvykvlkqvhPdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7xq5_A:HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF SCINO2P-SCINO4P BOUND PROMOTER DNA organism=? DNA sequence DA(D2):DT(C15) DT(D3):DA(C14) DT(D4):DA(C13) DT(D5):DA(C12) DT(D6):DA(C11) DC(D7):DG(C10) DA(D8):DT(C9) DC(D9):DG(C8) DA(D10):DT(C7) DT(D11):DA(C6) DG(D12):DC(C5) DC(D13):DG(C4) DA(D14):DT(C3) DG(D15):DC(C2) chainA ( 12) HIS12 0 0 0 1 9 12 16 0 0 0 0 0 0 0 ( 15) SER15 0 0 0 5 2 0 0 0 0 0 0 0 0 0 ( 16) GLU16 0 0 0 0 5 9 13 1 0 0 0 0 0 0 ( 19) ARG19 0 0 0 0 4 4 0 0 0 0 0 0 0 0 ( 20) ARG20 0 0 0 0 0 0 0 5 7 0 0 0 0 0 ( 24) ARG24 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mkltdgqirinHvsSEkkRReleRaifdelvavvpdlqpqesrseliiylkslsylswlyerneklrkqiiakhe >7xq5_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF SCINO2P-SCINO4P BOUND PROMOTER DNA organism=? DNA sequence DC(C2):DG(D15) DT(C3):DA(D14) DG(C4):DC(D13) DC(C5):DG(D12) DA(C6):DT(D11) DT(C7):DA(D10) DG(C8):DC(D9) DT(C9):DA(D8) DG(C10):DC(D7) DA(C11):DT(D6) DA(C12):DT(D5) DA(C13):DT(D4) DA(C14):DT(D3) DT(C15):DA(D2) chainA ( 12) HIS12 0 0 0 0 0 0 0 16 12 9 1 0 0 0 ( 15) SER15 0 0 0 0 0 0 0 0 0 2 5 0 0 0 ( 16) GLU16 0 0 0 0 0 0 1 13 9 5 0 0 0 0 ( 19) ARG19 0 0 0 0 0 0 0 0 4 4 0 0 0 0 ( 20) ARG20 0 0 0 0 0 7 5 0 0 0 0 0 0 0 ( 24) ARG24 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainB ( 11) HIS12 0 6 11 7 4 0 0 0 0 0 0 0 0 0 ( 15) GLU16 0 0 2 10 9 0 0 0 0 0 0 0 0 0 ( 18) ARG19 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 19) ARG20 0 0 0 0 0 4 9 0 0 0 0 0 0 0 ( 43) ARG44 0 0 0 0 0 0 0 0 0 3 1 0 0 0 prot.sequence mkltdgqirinHvsSEkkRReleRaifdelvavvpdlqpqesrseliiylkslsylswlyerneklrkqiiakhe/ddpvkvrkwkHvqmEkiRRintkeaferliksvrtppkengkRipkhilltcvmndiksirsanealqhildd >7xq5_B:HLH,_helix-loop-helix_DNA-binding_domain; title=CRYSTAL STRUCTURE OF SCINO2P-SCINO4P BOUND PROMOTER DNA organism=? DNA sequence DC(C2):DG(D15) DT(C3):DA(D14) DG(C4):DC(D13) DC(C5):DG(D12) DA(C6):DT(D11) DT(C7):DA(D10) DG(C8):DC(D9) DT(C9):DA(D8) DG(C10):DC(D7) DA(C11):DT(D6) DA(C12):DT(D5) DA(C13):DT(D4) DA(C14):DT(D3) DT(C15):DA(D2) chainB ( 11) HIS12 0 6 11 7 4 0 0 0 0 0 0 0 0 0 ( 15) GLU16 0 0 2 10 9 0 0 0 0 0 0 0 0 0 ( 18) ARG19 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 19) ARG20 0 0 0 0 0 4 9 0 0 0 0 0 0 0 ( 43) ARG44 0 0 0 0 0 0 0 0 0 3 1 0 0 0 prot.sequence ddpvkvrkwkHvqmEkiRRintkeaferliksvrtppkengkRipkhilltcvmndiksirsanealqhildd >7xrc_C:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=CRYSTAL STRUCTURE OF THE DIMERIC BRN2 (POU3F2) POU DOMAIN BOUND TO PALINDROMIC MORE DNA organism=MUS DNA sequence DA(A201):DT(B211) DT(A202):DA(B210) DG(A203):DC(B209) DC(A204):DG(B208) DA(A205):DT(B207) DT(A206):DA(B206) DG(A207):DC(B205) DA(A208):DT(B204) DG(A209):DC(B203) DG(A210):DC(B202) chainC ( 42) SER287 0 0 0 1 0 0 0 0 0 0 ( 43) GLN288 10 2 0 0 0 0 0 0 0 0 ( 44) THR289 0 10 5 3 0 0 0 0 0 0 ( 47) CYS292 2 2 0 0 0 0 0 0 0 0 ( 48) ARG293 0 0 2 14 6 0 0 0 0 0 ( 54) LEU299 0 0 0 0 1 0 0 0 0 0 ( 58) ASN303 0 0 0 0 1 0 0 0 0 0 (117) ARG546 0 0 0 0 0 0 0 0 1 0 (118) VAL547 0 0 0 0 2 2 0 0 0 0 (121) CYS550 0 0 0 0 0 0 0 2 0 0 (122) ASN551 0 0 0 9 12 0 0 0 0 0 (125) GLN554 0 0 0 0 6 10 8 0 0 0 prot.sequence dtptsddleqfakqfkqrriklgftqadvglalgtlygnvfSQTtiCRfealqLsfkNmcklkpllnkwleeadsstsievsvkgaleshflkcpkpsaqeitsladslqlekevvRVwfCNrrQkekrmtppg >7xse_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX TRANSCRIBING A NUCLEOSOME (EC42) organism=? DNA sequence DA(T-72):DT(N72) DT(T-71):DA(N71) DC(T-70):DG(N70) DA(T-69):DT(N69) DG(T-68):DC(N68) DA(T-67):DT(N67) DA(T-66):DT(N66) DT(T-65):DA(N65) DC(T-64):DG(N64) DC(T-63):DG(N63) DC(T-62):DG(N62) DG(T-61):DC(N61) DG(T-60):DC(N60) DT(T-59):DA(N59) DG(T-58):DC(N58) DC(T-57):DG(N57) DC(T-56):DG(N56) DG(T-55):DC(N55) DA(T-54):DT(N54) DG(T-53):DC(N53) DG(T-52):DC(N52) DC(T-51):DG(N51) DC(T-50):DG(N50) DG(T-49):DC(N49) DC(T-48):DG(N48) DT(T-47):DA(N47) DC(T-46):DG(N46) DA(T-45):DT(N45) DA(T-44):DT(N44) DT(T-43):DA(N43) DT(T-42):DA(N42) DG(T-41):DC(N41) DG(T-40):DC(N40) DT(T-39):DA(N39) DC(T-38):DG(N38) DG(T-37):DC(N37) DT(T-36):DA(N36) DA(T-35):DT(N35) DG(T-34):DC(N34) DA(T-33):DT(N33) DC(T-32):DG(N32) DA(T-31):DT(N31) DG(T-30):DC(N30) DC(T-29):DG(N29) DT(T-28):DA(N28) DC(T-27):DG(N27) DT(T-26):DA(N26) DA(T-25):DT(N25) DG(T-24):DC(N24) DC(T-23):DG(N23) DA(T-22):DT(N22) DC(T-21):DG(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DT(T-17):DA(N17) DT(T-16):DA(N16) DA(T-15):DT(N15) DA(T-14):DT(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DG(T-11):DC(N11) DC(T-10):DG(N10) DA(T-9):DT(N9) DC(T-8):DG(N8) DG(T-7):DC(N7) DT(T-6):DA(N6) DA(T-5):DT(N5) DC(T-4):DG(N4) DG(T-3):DC(N3) DC(T-2):DG(N2) DG(T-1):DC(N1) DC(T0):DG(N0) DT(T1):DA(N-1) DG(T2):DC(N-2) DT(T3):DA(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DC(T7):DG(N-7) DC(T8):DG(N-8) DG(T9):DC(N-9) DC(T10):DG(N-10) DG(T11):DC(N-11) DT(T12):DA(N-12) DT(T13):DA(N-13) DT(T14):DA(N-14) DT(T15):DA(N-15) DA(T16):DT(N-16) DA(T17):DT(N-17) DC(T18):DG(N-18) DC(T19):DG(N-19) DG(T20):DC(N-20) DC(T21):DG(N-21) DC(T22):DG(N-22) DA(T23):DT(N-23) DA(T24):DT(N-24) DG(T25):DC(N-25) DG(T26):DC(N-26) DG(T27):DC(N-27) DG(T28):DC(N-28) DA(T29):DT(N-29) DT(T30):DA(N-30) DT(T31):DA(N-31) DA(T32):DT(N-43) DC(T33):DG(N-44) DA(T34):DG(N-45) DC(T35):DT(N-46) DC(T36):DC(N-47) DC(T37):DC(N-48) DA(T38):DG(N-49) DA(T39):DT(N-50) DG(T40):DG(N-51) DA(T41):DC(N-52) DC(T42):DT(N-53) DA(T43):DC(N-54) DC(T44):DT(N-55) DC(T45):DG(N-56) DA(T46):DT(N-57) DG(T47):DC(N-58) DG(T48):DT(N-59) DC(T49):DT(N-60) DA(T50):DT(N-61) chainA (239) MET253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (304) LYS318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 (435) PRO449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (818) THR832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (819) ALA833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1338) ARG1389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sqfpyssaplrsvkevqfgllspeeiraisvvkieypeimdesrqrpregglndpklgsidrnfkcqtcgegmaecpghfghmelakpvfhigfipkikkvcecicmncgkllldetnptmaqairirdpkkrfnavwqlcktkmvceadapvsrggcgntqpvvrkdgmklwgtwkksrdaqperklltpgeilnvfkhispedcfrlgfnedyarpewmiitvlpvpppqvrpsiaMdettqgqddlthklsdilkaninvqklemdgspqhiineveqllqfhvatymdndiagqpqalqKsgrpvkairarlkgkegrlrgnlmgkrvdfsartvisgdpnleldqvgvpisiaktlsypetvtqynihrlteyvrngpnehpgakyvirdngdridlryhkragdivlqygwkverhlmdddpvlfnrqPslhkmsmmahrvkvmpystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpvmgivqdtlcgvrkmtlrdtfieyeqvmnmlfwvpswdgvvpqpailkpkplwtgkqllsiaipsgihlqrtdggnsllspkdngmlivdgkvmfgvvdkktvgsgggglihtvmrekgpkicaelfgniqkvvnywllhngfsigigdaiadastmkeithaissakeqvqeiiykaqhnelelkpgmtlresfegevsrtlndardsagrsaemnlkdlnnvkqmvsagskgsfiniaqmsacvgqqmvegkriafgfadrslphftkddfspeskgfvensylrgltpqefffhamagreglidtavkTAetgyiqrrlvkaledimvhydgttrnslgdiiqflygedgldgtqverqtidtipgsdkafhkryyvdlmdeknsikpdvieyaadilgdvelqkelnseyeqlvsdrkflreivfvngdhnwplpvnlrriiqnaqqifhldrakasdltipeiihgvrdlckklfvlrgenelikeaqqnatslfqclvrarlatrrileefrlnrdafewvlgtieaqfqrslvhpgemvgviaaqsigepatqmnvtlgvprlkeilnvakniktpaltvyldreialdiekakviqssieyttlknvtsateiyydpdptstvieedfdtveayfsqspwllrleldrarmldkqltmnqvadkisevfsddlfvmwsednadkliircrvieedqmlkrieahmldlialrgipgiskvymvkhkvsvpdesgeykneelwaletdginlaevmavpgvdssrtysnsfveilsvlgieatrsslykeilnviafdgsyvnyrhmallvdvmtsrgylmaitRhginradtgalmrcsfeetveilfeagaaaelddcrgvsenvmlgqlapmgtgafdvmidekllts >7xsz_f:Histone-fold; title=RNA POLYMERASE II ELONGATION COMPLEX TRANSCRIBING A NUCLEOSOME (EC115) organism=? DNA sequence DG(N-101):DC(T101) DT(N-100):DA(T100) DG(N-99):DC(T99) DT(N-98):DA(T98) DT(N-97):DA(T97) DT(N-96):DA(T96) DG(N-95):DC(T95) DG(N-94):DC(T94) DT(N-93):DA(T93) DG(N-92):DC(T92) DT(N-91):DA(T91) DG(N-90):DC(T90) DT(N-89):DA(T89) DT(N-88):DA(T88) DT(N-87):DA(T87) DG(N-86):DC(T86) DG(N-85):DC(T85) DG(N-84):DC(T84) DT(N-83):DA(T83) DG(N-82):DC(T82) DG(N-81):DC(T81) DT(N-80):DA(T80) DG(N-79):DC(T79) DG(N-78):DC(T78) DC(N-77):DG(T77) DC(N-76):DG(T76) DG(N-75):DC(T75) DT(N-74):DA(T74) DT(N-73):DA(T73) DT(N-72):DA(T72) DT(N-71):DA(T71) DC(N-70):DG(T70) DG(N-69):DC(T69) DT(N-68):DA(T68) DT(N-67):DA(T67) DG(N-66):DC(T66) DT(N-65):DA(T65) DT(N-64):DA(T64) DT(N-63):DA(T63) DT(N-62):DA(T62) DT(N-61):DA(T61) DT(N-60):DA(T60) DT(N-59):DA(T59) DC(N-58):DG(T58) DT(N-57):DA(T57) DG(N-56):DC(T56) DT(N-55):DA(T55) DC(N-54):DG(T54) DT(N-53):DA(T53) DC(N-52):DG(T52) DG(N-51):DC(T51) DT(N-50):DA(T50) DG(N-49):DC(T49) DC(N-48):DG(T48) DC(N-47):DG(T47) DT(N-46):DA(T46) DG(N-45):DC(T45) DG(N-44):DC(T44) DT(N-43):DA(T43) DG(N-42):DC(T42) DT(N-41):DA(T41) DC(N-40):DG(T40) DT(N-39):DA(T39) DT(N-38):DA(T38) DG(N-37):DC(T37) DG(N-36):DC(T36) DG(N-35):DC(T35) DT(N-34):DA(T34) DG(N-33):DC(T33) DT(N-32):DA(T32) DT(N-31):DA(T31) DT(N-30):DA(T30) DT(N-29):DA(T29) DC(N-28):DG(T28) DC(N-27):DG(T27) DC(N-26):DG(T26) DC(N-25):DG(T25) DT(N-24):DA(T24) DT(N-23):DA(T23) DG(N-22):DC(T22) DG(N-21):DC(T21) DC(N-20):DG(T20) DG(N-19):DC(T19) DG(N-18):DC(T18) DT(N-17):DA(T17) DT(N-16):DA(T16) DT(N-15):DA(T15) DT(N-14):DA(T14) DT(N-13):DA(T13) DT(N-12):DA(T12) DC(N-11):DG(T11) DG(N-10):DC(T10) DC(N-9):DG(T9) DG(N-8):DC(T8) DG(N-7):DC(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DT(N-3):DA(T3) DC(N-2):DG(T2) DT(N-1):DA(T1) DG(N0):DC(T0) DC(N1):DG(T-1) DG(N2):DC(T-2) DC(N3):DG(T-3) DG(N4):DC(T-4) DT(N5):DA(T-5) DT(N6):DA(T-6) DC(N7):DG(T-7) DG(N8):DC(T-8) DT(N9):DA(T-9) DG(N10):DC(T-10) DC(N11):DG(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DT(N14):DA(T-14) DT(N15):DA(T-15) DT(N16):DA(T-16) DT(N17):DA(T-17) DG(N18):DC(T-18) DC(N19):DG(T-19) DG(N20):DC(T-20) DG(N21):DC(T-21) DT(N22):DA(T-22) DG(N23):DC(T-23) DC(N24):DG(T-24) DT(N25):DA(T-25) DT(N26):DA(T-26) DG(N27):DC(T-27) DT(N28):DA(T-28) DG(N29):DC(T-29) DC(N30):DG(T-30) DA(N42):DT(T-42) DA(N43):DT(T-43) DA(N44):DT(T-44) DA(N45):DT(T-45) DG(N46):DC(T-46) DA(N47):DT(T-47) DG(N48):DC(T-48) DC(N49):DG(T-49) DG(N50):DC(T-50) DG(N51):DC(T-51) DC(N52):DG(T-52) DC(N53):DG(T-53) DT(N54):DA(T-54) DC(N55):DG(T-55) DG(N56):DC(T-56) DG(N57):DC(T-57) DC(N58):DG(T-58) DA(N59):DT(T-59) DC(N60):DG(T-60) DC(N61):DG(T-61) DG(N62):DC(T-62) DG(N63):DC(T-63) DG(N64):DC(T-64) chainf ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >7xt7_f:Histone-fold; title=RNA POLYMERASE II ELONGATION COMPLEX TRANSCRIBING A NUCLEOSOME (EC49B) organism=? DNA sequence DA(T-72):DT(N72) DT(T-71):DA(N71) DC(T-70):DG(N70) DA(T-69):DT(N69) DG(T-68):DC(N68) DA(T-67):DT(N67) DA(T-66):DT(N66) DT(T-65):DA(N65) DC(T-64):DG(N64) DC(T-63):DG(N63) DC(T-62):DG(N62) DG(T-61):DC(N61) DG(T-60):DC(N60) DT(T-59):DA(N59) DG(T-58):DC(N58) DC(T-57):DG(N57) DC(T-56):DG(N56) DG(T-55):DC(N55) DA(T-54):DT(N54) DG(T-53):DC(N53) DG(T-52):DC(N52) DC(T-51):DG(N51) DC(T-50):DG(N50) DG(T-49):DC(N49) DC(T-48):DG(N48) DT(T-47):DA(N47) DC(T-46):DG(N46) DA(T-45):DT(N45) DA(T-44):DT(N44) DT(T-43):DA(N43) DT(T-42):DA(N42) DG(T-41):DC(N41) DG(T-40):DC(N40) DT(T-39):DA(N39) DC(T-38):DG(N38) DG(T-37):DC(N37) DT(T-36):DA(N36) DA(T-35):DT(N35) DG(T-34):DC(N34) DA(T-33):DT(N33) DC(T-32):DG(N32) DA(T-31):DT(N31) DG(T-30):DC(N30) DC(T-29):DG(N29) DT(T-28):DA(N28) DC(T-27):DG(N27) DT(T-26):DA(N26) DA(T-25):DT(N25) DG(T-24):DC(N24) DC(T-23):DG(N23) DA(T-22):DT(N22) DC(T-21):DG(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DT(T-17):DA(N17) DT(T-16):DA(N16) DA(T-15):DT(N15) DA(T-14):DT(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DG(T-11):DC(N11) DC(T-10):DG(N10) DA(T-9):DT(N9) DC(T-8):DG(N8) DG(T-7):DC(N7) DT(T-6):DA(N6) DA(T-5):DT(N5) DC(T-4):DG(N4) DG(T-3):DC(N3) DC(T-2):DG(N2) DG(T-1):DC(N1) DC(T0):DG(N0) DT(T1):DA(N-1) DG(T2):DC(N-2) DT(T3):DA(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DC(T7):DG(N-7) DC(T8):DG(N-8) DG(T9):DC(N-9) DC(T10):DG(N-10) DG(T11):DC(N-11) DT(T12):DA(N-12) DT(T13):DA(N-13) DT(T14):DA(N-14) DT(T15):DA(N-15) DA(T16):DT(N-16) DA(T17):DT(N-17) DC(T18):DG(N-18) DC(T19):DG(N-19) DT(T20):DA(N-20) DT(T21):DA(N-21) DT(T22):DA(N-22) DT(T23):DA(N-23) DT(T24):DG(N-35) DG(T25):DG(N-36) DG(T26):DG(N-37) DG(T27):DT(N-38) DG(T28):DT(N-39) DA(T29):DC(N-40) DA(T30):DT(N-41) DA(T31):DG(N-42) DA(T32):DT(N-43) DC(T33):DG(N-44) DA(T34):DG(N-45) DC(T35):DT(N-46) DC(T36):DC(N-47) DC(T37):DC(N-48) DA(T38):DG(N-49) DA(T39):DT(N-50) DG(T40):DG(N-51) DA(T41):DC(N-52) DC(T42):DT(N-53) chainf ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >7xtd_d:Histone-fold; title=RNA POLYMERASE II ELONGATION COMPLEX TRANSCRIBING A NUCLEOSOME (EC58OCT) organism=? DNA sequence DG(N-115):DC(T115) DT(N-114):DA(T114) DC(N-113):DG(T113) DT(N-112):DT(T112) DG(N-111):DT(T111) DG(N-110):DA(T110) DC(N-109):DA(T109) DC(N-108):DT(T108) DA(N-107):DC(T107) DT(N-106):DG(T106) DC(N-105):DA(T105) DT(N-104):DG(T104) DT(N-103):DA(T103) DT(N-102):DA(T102) DG(N-101):DC(T101) DT(N-100):DA(T100) DG(N-99):DC(T99) DT(N-98):DA(T98) DT(N-97):DA(T97) DT(N-96):DA(T96) DG(N-95):DC(T95) DG(N-94):DC(T94) DT(N-93):DA(T93) DG(N-92):DC(T92) DT(N-91):DA(T91) DG(N-90):DC(T90) DT(N-89):DA(T89) DT(N-88):DA(T88) DT(N-87):DA(T87) DG(N-86):DC(T86) DG(N-85):DC(T85) DG(N-84):DC(T84) DT(N-83):DA(T83) DG(N-82):DC(T82) DG(N-81):DC(T81) DT(N-80):DA(T80) DG(N-79):DC(T79) DG(N-78):DC(T78) DC(N-77):DG(T77) DC(N-76):DG(T76) DG(N-75):DC(T75) DT(N-74):DA(T74) DT(N-73):DA(T73) DT(N-72):DA(T72) DT(N-71):DA(T71) DC(N-70):DG(T70) DG(N-69):DC(T69) DT(N-68):DA(T68) DT(N-67):DA(T67) DG(N-66):DC(T66) DT(N-65):DA(T65) DT(N-64):DA(T64) DT(N-63):DA(T63) DT(N-62):DA(T62) DT(N-61):DA(T61) DT(N-60):DA(T60) DT(N-59):DA(T59) DC(N-58):DG(T58) DT(N-57):DA(T57) DG(N-56):DC(T56) DT(N-55):DA(T55) DC(N-54):DG(T54) DT(N-53):DA(T53) DC(N-52):DG(T52) DG(N-51):DC(T51) DT(N-50):DA(T50) DG(N-49):DC(T49) DC(N-48):DG(T48) DC(N-47):DG(T47) DT(N-46):DA(T46) DG(N-45):DC(T45) DG(N-44):DC(T44) DT(N-43):DA(T43) DG(N-42):DC(T42) DT(N-41):DA(T41) DC(N-40):DG(T40) DT(N-39):DA(T39) DT(N-38):DA(T38) DG(N-37):DC(T37) DG(N-36):DC(T36) DG(N-35):DC(T35) DT(N-34):DA(T34) DG(N-33):DC(T33) DT(N-32):DA(T32) DA(N-31):DT(T31) DA(N-30):DT(T30) DT(N-29):DA(T29) DC(N-28):DG(T28) DC(N-27):DG(T27) DA(N-15):DG(T26) DA(N-14):DG(T25) DA(N-13):DA(T24) DA(N-12):DA(T23) DC(N-11):DC(T22) DG(N-10):DC(T21) DC(N-9):DG(T20) DG(N-8):DC(T19) DG(N-7):DC(T18) DG(N-6):DA(T17) DG(N-5):DA(T16) DG(N-4):DT(T15) DA(N-3):DT(T14) DC(N-2):DT(T13) DA(N-1):DT(T12) DG(N0):DG(T11) DC(N1):DC(T10) DG(N2):DG(T9) DC(N3):DC(T8) DG(N4):DC(T7) DT(N5):DC(T6) DA(N6):DC(T5) DC(N7):DC(T4) chaind ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkRstitsreiqtavrlllpgelakhavsegtkavtkytsak >7xti_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX TRANSCRIBING A NUCLEOSOME (EC58HEX) organism=? DNA sequence DC(N-77):DG(T77) DC(N-76):DG(T76) DG(N-75):DC(T75) DT(N-74):DA(T74) DT(N-73):DA(T73) DT(N-72):DA(T72) DT(N-71):DA(T71) DC(N-70):DG(T70) DG(N-69):DC(T69) DT(N-68):DA(T68) DT(N-67):DA(T67) DG(N-66):DC(T66) DT(N-65):DA(T65) DT(N-64):DA(T64) DT(N-63):DA(T63) DT(N-62):DA(T62) DT(N-61):DA(T61) DT(N-60):DA(T60) DT(N-59):DA(T59) DC(N-58):DG(T58) DT(N-57):DA(T57) DG(N-56):DC(T56) DT(N-55):DA(T55) DC(N-54):DG(T54) DT(N-53):DA(T53) DC(N-52):DG(T52) DG(N-51):DC(T51) DT(N-50):DA(T50) DG(N-49):DC(T49) DC(N-48):DG(T48) DC(N-47):DG(T47) DT(N-46):DA(T46) DG(N-45):DC(T45) DG(N-44):DC(T44) DT(N-43):DA(T43) DG(N-42):DC(T42) DT(N-41):DA(T41) DC(N-40):DG(T40) DT(N-39):DA(T39) DT(N-38):DA(T38) DG(N-37):DC(T37) DG(N-36):DC(T36) DG(N-35):DC(T35) DT(N-34):DA(T34) DG(N-33):DC(T33) DT(N-32):DA(T32) DA(N-31):DT(T31) DA(N-30):DT(T30) DT(N-29):DA(T29) DC(N-28):DG(T28) DC(N-27):DG(T27) DA(N-15):DG(T26) DA(N-14):DG(T25) DA(N-13):DA(T24) DA(N-12):DA(T23) DC(N-11):DC(T22) DG(N-10):DC(T21) DC(N-9):DG(T20) DG(N-8):DC(T19) DG(N-7):DC(T18) DG(N-6):DA(T17) DG(N-5):DA(T16) DG(N-4):DT(T15) DA(N-3):DT(T14) DC(N-2):DT(T13) DA(N-1):DT(T12) DG(N0):DG(T11) DC(N1):DC(T10) DG(N2):DG(T9) DC(N3):DC(T8) DG(N4):DC(T7) DT(N5):DC(T6) DA(N6):DC(T5) DC(N7):DC(T4) chainA (237) ILE251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) MET253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (435) PRO449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (818) THR832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 (819) ALA833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (1338) ARG1389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence sqfpyssaplrsvkevqfgllspeeiraisvvkieypeimdesrqrpregglndpklgsidrnfkcqtcgegmaecpghfghmelakpvfhigfipkikkvcecicmncgkllldetnptmaqairirdpkkrfnavwqlcktkmvceadapvsrggcgntqpvvrkdgmklwgtwkksrdaqperklltpgeilnvfkhispedcfrlgfnedyarpewmiitvlpvpppqvrpsIaMdettqgqddlthklsdilkaninvqklemdgspqhiineveqllqfhvatymdndiagqpqalqksgrpvkairarlkgkegrlrgnlmgkrvdfsartvisgdpnleldqvgvpisiaktlsypetvtqynihrlteyvrngpnehpgakyvirdngdridlryhkragdivlqygwkverhlmdddpvlfnrqPslhkmsmmahrvkvmpystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpvmgivqdtlcgvrkmtlrdtfieyeqvmnmlfwvpswdgvvpqpailkpkplwtgkqllsiaipsgihlqrtdggnsllspkdngmlivdgkvmfgvvdkktvgsgggglihtvmrekgpkicaelfgniqkvvnywllhngfsigigdaiadastmkeithaissakeqvqeiiykaqhnelelkpgmtlresfegevsrtlndardsagrsaemnlkdlnnvkqmvsagskgsfiniaqmsacvgqqmvegkriafgfadrslphftkddfspeskgfvensylrgltpqefffhamagreglidtavkTAetgyiqrrlvkaledimvhydgttrnslgdiiqflygedgldgtqverqtidtipgsdkafhkryyvdlmdeknsikpdvieyaadilgdvelqkelnseyeqlvsdrkflreivfvngdhnwplpvnlrriiqnaqqifhldrakasdltipeiihgvrdlckklfvlrgenelikeaqqnatslfqclvrarlatrrileefrlnrdafewvlgtieaqfqrslvhpgemvgviaaqsigepatqmnvtlgvprlkeilnvakniktpaltvyldreialdiekakviqssieyttlknvtsateiyydpdptstvieedfdtveayfsqspwllrleldrarmldkqltmnqvadkisevfsddlfvmwsednadkliircrvieedqmlkrieahmldlialrgipgiskvymvkhkvsvpdesgeykneelwaletdginlaevmavpgvdssrtysnsfveilsvlgieatrsslykeilnviafdgsyvnyrhmallvdvmtsrgylmaitRhginradtgalmrcsfeetveilfeagaaaelddcrgvsenvmlgqlapmgtgafdvmidekllts >7xue_IJ: title=CRYO-EM STRUCTURE OF HK022 PUTRNA-ASSOCIATED E.COLI RNA POLYMERASE ELONGATION COMPLEX organism=? DNA sequence DG(A79):DA(B21) DA(A80):DA(B20) DG(A81):DA(B19) DA(A82):DA(B18) DA(A83):DA(B17) DG(A84):DC(B16) DC(A94):DG(B15) DT(A95):DA(B14) DT(A96):DA(B13) DT(A97):DA(B12) DT(A98):DA(B11) DA(A99):DT(B10) DG(A100):DC(B9) DA(A101):DT(B8) DA(A102):DT(B7) DT(A103):DA(B6) DT(A104):DA(B5) DG(A105):DC(B4) DT(A106):DA(B3) DG(A107):DC(B2) DA(A108):DT(B1) chainI (150) ARG151 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 43 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (255) ARG270 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7xue_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF HK022 PUTRNA-ASSOCIATED E.COLI RNA POLYMERASE ELONGATION COMPLEX organism=? DNA sequence DT(B1):DA(A108) DC(B2):DG(A107) DA(B3):DT(A106) DC(B4):DG(A105) DA(B5):DT(A104) DA(B6):DT(A103) DT(B7):DA(A102) DT(B8):DA(A101) DC(B9):DG(A100) DT(B10):DA(A99) DA(B11):DT(A98) DA(B12):DT(A97) DA(B13):DT(A96) DA(B14):DT(A95) DG(B15):DC(A94) DC(B16):DG(A84) DA(B17):DA(A83) DA(B18):DA(A82) DA(B19):DG(A81) DA(B20):DA(A80) DA(B21):DG(A79) chainJ (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7xug_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF HK022 PUTRNA-LESS E.COLI RNA POLYMERASE ELONGATION COMPLEX organism=? DNA sequence DT(B1):DA(A108) DC(B2):DG(A107) DA(B3):DT(A106) DC(B4):DG(A105) DA(B5):DT(A104) DA(B6):DT(A103) DT(B7):DA(A102) DT(B8):DA(A101) DC(B9):DG(A100) DT(B10):DA(A99) DA(B11):DT(A98) DA(B12):DT(A97) DA(B13):DT(A96) DA(B14):DG(A85) DG(B15):DG(A84) DC(B16):DA(A83) DA(B17):DA(A82) DA(B18):DG(A81) DA(B19):DA(A80) DA(B20):DG(A79) chainI (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >7xug_IJ: title=CRYO-EM STRUCTURE OF HK022 PUTRNA-LESS E.COLI RNA POLYMERASE ELONGATION COMPLEX organism=? DNA sequence DT(B1):DA(A108) DC(B2):DG(A107) DA(B3):DT(A106) DC(B4):DG(A105) DA(B5):DT(A104) DA(B6):DT(A103) DT(B7):DA(A102) DT(B8):DA(A101) DC(B9):DG(A100) DT(B10):DA(A99) DA(B11):DT(A98) DA(B12):DT(A97) DA(B13):DT(A96) DA(B14):DG(A85) DG(B15):DG(A84) DC(B16):DA(A83) DA(B17):DA(A82) DA(B18):DG(A81) DA(B19):DA(A80) DA(B20):DG(A79) chainI (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 chainJ (252) ASP267 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlnDlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmraaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7xui_IJ: title=CRYO-EM STRUCTURE OF SIGMA70 BOUND HK022 PUTRNA-ASSOCIATED E.COLI RNA POLYMERASE ELONGATION COMPLEX organism=? DNA sequence DC(B3) DA(B4) DA(B5) DT(B6) DT(B7) DC(B8) DT(B9) DA(B10) DA(B11) DA(B12) chainI chainJ (412) ALA426 0 3 0 0 0 0 0 0 0 0 (776) THR790 3 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >7xur_A:Homeodomain-like; title=THE CRYO-EM STRUCTURE OF HUMAN MINI-SNAPC IN COMPLEX WITH HU6-1 PSE organism=? DNA sequence DA(Y44):DT(X-44) DA(Y45):DT(X-45) DA(Y46):DT(X-46) DT(Y47):DA(X-47) DA(Y48):DT(X-48) DC(Y49):DG(X-49) DT(Y50):DA(X-50) DT(Y51):DA(X-51) DT(Y52):DA(X-52) DC(Y53):DG(X-53) DA(Y55):DT(X-55) DG(Y56):DC(X-56) DT(Y57):DA(X-57) DT(Y58):DA(X-58) DA(Y59):DT(X-59) DC(Y60):DG(X-60) DG(Y61):DC(X-61) DG(Y62):DC(X-62) DT(Y63):DA(X-63) DA(Y64):DT(X-64) DA(Y65):DT(X-65) DG(Y66):DC(X-66) DC(Y67):DG(X-67) chainA (193) ILE388 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 (194) TYR389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 (198) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (241) ASP436 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (245) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 (246) ASP441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (250) ARG445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 (251) ARG446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 (297) LEU492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (298) SER493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (301) LYS496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence hfmkpyfkdkvtgvgppanedtrekaaqgikafeellvtkwknwekallrksvvsdrkeiqdinqlpeeallwekisninfaeeirkfwqnsehpsinkqewsreeeerlqaiaaahghlewqkiaeelgtsrsafqclqkfqqhnkalkrkewteeedrmltqlvqemrvgshipyrrivyymegrdsmqlIYrwtKsldpglkkgywapeedakllqavakygeqdwfkireevpgrsDaqcRDrylRRlhfslkkgrwnlkeeeqlieliekygvghwakiaselphrsgsqcLSkwKimmgkk >7xur_AB:Homeodomain-like; title=THE CRYO-EM STRUCTURE OF HUMAN MINI-SNAPC IN COMPLEX WITH HU6-1 PSE organism=? DNA sequence DA(Y44):DT(X-44) DA(Y45):DT(X-45) DA(Y46):DT(X-46) DT(Y47):DA(X-47) DA(Y48):DT(X-48) DC(Y49):DG(X-49) DT(Y50):DA(X-50) DT(Y51):DA(X-51) DT(Y52):DA(X-52) DC(Y53):DG(X-53) DA(Y55):DT(X-55) DG(Y56):DC(X-56) DT(Y57):DA(X-57) DT(Y58):DA(X-58) DA(Y59):DT(X-59) DC(Y60):DG(X-60) DG(Y61):DC(X-61) DG(Y62):DC(X-62) DT(Y63):DA(X-63) DA(Y64):DT(X-64) DA(Y65):DT(X-65) DG(Y66):DC(X-66) DC(Y67):DG(X-67) chainA (193) ILE388 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 (194) TYR389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 (198) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (241) ASP436 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (245) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 (246) ASP441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (250) ARG445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 (251) ARG446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 (297) LEU492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (298) SER493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (301) LYS496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainB (104) ARG148 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG151 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS194 0 0 0 0 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) TRP350 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hfmkpyfkdkvtgvgppanedtrekaaqgikafeellvtkwknwekallrksvvsdrkeiqdinqlpeeallwekisninfaeeirkfwqnsehpsinkqewsreeeerlqaiaaahghlewqkiaeelgtsrsafqclqkfqqhnkalkrkewteeedrmltqlvqemrvgshipyrrivyymegrdsmqlIYrwtKsldpglkkgywapeedakllqavakygeqdwfkireevpgrsDaqcRDrylRRlhfslkkgrwnlkeeeqlieliekygvghwakiaselphrsgsqcLSkwKimmgkk/nfpeyelpelntrafhvgafgelwrgrlrgagdlslrepadsdredaavardldcsleaaaelravcgldkldpevipentdlvtlgvrkrflehreetitidRacRqetfvyemeshaigkkpensadmieegelilsvnilypvifhKhkehkpyqtmlvlgsqkltqlrdsircvsdlqiggefsntpdqiskdlyksaffyfegtfyndkrypecrdlsrtiiewseshdrgygkfqtarmedftfndlciklgfpylychqgdcehvivitdirlvhhddcldrtlypllikkhwlWtrkcfvckmytarwvtnndsfapedpcffcdvcfrmlhydsegnklgeflaypyvdpgtfn >7xur_B: title=THE CRYO-EM STRUCTURE OF HUMAN MINI-SNAPC IN COMPLEX WITH HU6-1 PSE organism=? DNA sequence DA(Y44):DT(X-44) DA(Y45):DT(X-45) DA(Y46):DT(X-46) DT(Y47):DA(X-47) DA(Y48):DT(X-48) DC(Y49):DG(X-49) DT(Y50):DA(X-50) DT(Y51):DA(X-51) DT(Y52):DA(X-52) DC(Y53):DG(X-53) DA(Y55):DT(X-55) DG(Y56):DC(X-56) DT(Y57):DA(X-57) DT(Y58):DA(X-58) DA(Y59):DT(X-59) DC(Y60):DG(X-60) DG(Y61):DC(X-61) DG(Y62):DC(X-62) DT(Y63):DA(X-63) DA(Y64):DT(X-64) DA(Y65):DT(X-65) DG(Y66):DC(X-66) DC(Y67):DG(X-67) chainB (104) ARG148 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (107) ARG151 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS194 0 0 0 0 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) TRP350 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nfpeyelpelntrafhvgafgelwrgrlrgagdlslrepadsdredaavardldcsleaaaelravcgldkldpevipentdlvtlgvrkrflehreetitidRacRqetfvyemeshaigkkpensadmieegelilsvnilypvifhKhkehkpyqtmlvlgsqkltqlrdsircvsdlqiggefsntpdqiskdlyksaffyfegtfyndkrypecrdlsrtiiewseshdrgygkfqtarmedftfndlciklgfpylychqgdcehvivitdirlvhhddcldrtlypllikkhwlWtrkcfvckmytarwvtnndsfapedpcffcdvcfrmlhydsegnklgeflaypyvdpgtfn >7xuz_CD: title=CRYSTAL STRUCTURE OF A HDAC4-MEF2A-DNA TERNARY COMPLEX organism=? DNA sequence DT(F4):DA(E13) DT(F5):DA(E12) DA(F6):DT(E11) DT(F7):DA(E10) DA(F8):DT(E9) DA(F9):DT(E8) DA(F10):DT(E7) DT(F11):DA(E6) DA(F12):DT(E5) DG(F13):DC(E4) DT(F14):DA(E3) chainC ( 20) LYS23 0 0 0 0 0 0 0 0 2 0 0 chainD ( 17) LYS23 0 5 0 0 0 0 0 0 0 0 0 prot.sequence kkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyasmdkvllkyteynephesrtnsdive/qitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk >7xuz_D:SRF-like; title=CRYSTAL STRUCTURE OF A HDAC4-MEF2A-DNA TERNARY COMPLEX organism=? DNA sequence DA(E3):DT(F14) DC(E4):DG(F13) DT(E5):DA(F12) DA(E6):DT(F11) DT(E7):DA(F10) DT(E8):DA(F9) DT(E9):DA(F8) DA(E10):DT(F7) DT(E11):DA(F6) DA(E12):DT(F5) DA(E13):DT(F4) chainD ( 17) LYS23 0 0 0 0 0 0 0 0 0 5 0 prot.sequence qitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk >7xuz_GH: title=CRYSTAL STRUCTURE OF A HDAC4-MEF2A-DNA TERNARY COMPLEX organism=? DNA sequence DC(I4):DG(J13) DT(I5):DA(J12) DA(I6):DT(J11) DT(I7):DA(J10) DT(I8):DA(J9) DT(I9):DA(J8) DA(I10):DT(J7) DT(I11):DA(J6) DA(I12):DT(J5) DA(I13):DT(J4) DG(I14):DC(J3) chainG ( 20) LYS23 0 2 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG3 0 0 0 0 0 0 0 4 7 11 5 ( 22) LYS23 0 0 0 0 0 0 0 0 3 0 0 prot.sequence kkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyasmdkvllkyteynephesrtnsdivea/gRkkiqitrimdernrqvtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteynephesrtnsdivealnkk >7xv6_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN TR4 DNA-BINDING DOMAIN WITH C-TERMINAL EXTENSION (DBD-CTE) HOMODIMER BOUND TO DR1 RESPONSE ELEMENT organism=Homo sapiens DNA sequence DT(D2):DA(C18) DG(D3):DC(C17) DA(D4):DT(C16) DC(D5):DG(C15) DC(D6):DG(C14) DT(D7):DA(C13) DT(D8):DA(C12) DT(D9):DA(C11) DG(D10):DC(C10) DA(D11):DT(C9) DC(D12):DG(C8) DC(D13):DG(C7) DT(D14):DA(C6) DC(D15):DG(C5) DT(D16):DA(C4) DG(D17):DC(C3) DC(D18):DG(C2) chainA ( 23) GLU135 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS138 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LYS142 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG143 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) GLU135 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 ( 26) LYS138 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 ( 30) LYS142 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 ( 31) ARG143 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 prot.sequence vveycvvcgdkasgrhygavscEgcKgffKRsvrknltyscrsnqdciinkhhrnrcqfcrlkkclemgmkmesvqseRkpfdv/vveycvvcgdkasgrhygavscEgcKgffKRsvrknltyscrsnqdciinkhhrnrcqfcrlkkclemgmkmesvqs >7xv6_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN TR4 DNA-BINDING DOMAIN WITH C-TERMINAL EXTENSION (DBD-CTE) HOMODIMER BOUND TO DR1 RESPONSE ELEMENT organism=Homo sapiens DNA sequence DT(D2):DA(C18) DG(D3):DC(C17) DA(D4):DT(C16) DC(D5):DG(C15) DC(D6):DG(C14) DT(D7):DA(C13) DT(D8):DA(C12) DT(D9):DA(C11) DG(D10):DC(C10) DA(D11):DT(C9) DC(D12):DG(C8) DC(D13):DG(C7) DT(D14):DA(C6) DC(D15):DG(C5) DT(D16):DA(C4) DG(D17):DC(C3) DC(D18):DG(C2) chainB ( 23) GLU135 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 ( 26) LYS138 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 ( 30) LYS142 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 ( 31) ARG143 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 prot.sequence vveycvvcgdkasgrhygavscEgcKgffKRsvrknltyscrsnqdciinkhhrnrcqfcrlkkclemgmkmesvqs >7xv8_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN TR4 DNA-BINDING DOMAIN HOMODIMER BOUND TO DR1 RESPONSE ELEMENT organism=Homo sapiens DNA sequence DT(D4002):DA(C3018) DG(D4003):DC(C3017) DA(D4004):DT(C3016) DC(D4005):DG(C3015) DC(D4006):DG(C3014) DT(D4007):DA(C3013) DT(D4008):DA(C3012) DT(D4009):DA(C3011) DG(D4010):DC(C3010) DA(D4011):DT(C3009) DC(D4012):DG(C3008) DC(D4013):DG(C3007) DT(D4014):DA(C3006) DC(D4015):DG(C3005) DT(D4016):DA(C3004) DG(D4017):DC(C3003) DC(D4018):DG(C3002) chainA ( 23) GLU135 0 0 0 0 0 0 0 0 0 3 11 1 0 0 0 0 0 ( 30) LYS142 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 31) ARG143 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 prot.sequence vveycvvcgdkasgrhygavscEgckgffKRsvrknltyscrsnqdciinkhhrnrcqfcrlkkclemgmkmesvqs >7xv8_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN TR4 DNA-BINDING DOMAIN HOMODIMER BOUND TO DR1 RESPONSE ELEMENT organism=Homo sapiens DNA sequence DT(D4002):DA(C3018) DG(D4003):DC(C3017) DA(D4004):DT(C3016) DC(D4005):DG(C3015) DC(D4006):DG(C3014) DT(D4007):DA(C3013) DT(D4008):DA(C3012) DT(D4009):DA(C3011) DG(D4010):DC(C3010) DA(D4011):DT(C3009) DC(D4012):DG(C3008) DC(D4013):DG(C3007) DT(D4014):DA(C3006) DC(D4015):DG(C3005) DT(D4016):DA(C3004) DG(D4017):DC(C3003) DC(D4018):DG(C3002) chainA ( 23) GLU135 0 0 0 0 0 0 0 0 0 3 11 1 0 0 0 0 0 ( 30) LYS142 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 31) ARG143 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 chainB ( 22) GLU135 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS142 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG143 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vveycvvcgdkasgrhygavscEgckgffKRsvrknltyscrsnqdciinkhhrnrcqfcrlkkclemgmkmesvqs/veycvvcgdkasgrhygavscEgckgffKRsvrknltyscrsnqdciinkhhrnrcqfcrlkkclemgmkmesvqs >7xvl_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1.0 LINKER HISTONE ASSEMBLY (STICKY- 169AN DNA FRAGMENT) organism=? DNA sequence DC(I-82):DG(J82) DC(I-81):DG(J81) DA(I-80):DT(J80) DA(I-79):DT(J79) DA(I-78):DT(J78) DA(I-77):DT(J77) DA(I-76):DT(J76) DA(I-75):DT(J75) DA(I-74):DT(J74) DA(I-73):DT(J73) DA(I-72):DT(J72) DA(I-71):DT(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DC(I-67):DG(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DA(I29):DT(J-29) DG(I30):DC(J-30) DC(I31):DG(J-31) DG(I32):DC(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DG(I56):DC(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DC(I64):DG(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DG(I69):DC(J-69) DC(I70):DG(J-70) DA(I71):DT(J-71) DA(I72):DT(J-72) DA(I73):DT(J-73) DA(I74):DT(J-74) DA(I75):DT(J-75) DA(I76):DT(J-76) DA(I77):DT(J-77) DA(I78):DT(J-78) DA(I79):DT(J-79) DA(I80):DT(J-80) DC(I81):DG(J-81) DG(I82):DC(J-82) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/KrsrkesysiyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7xvl_KLMNOPQR:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1.0 LINKER HISTONE ASSEMBLY (STICKY- 169AN DNA FRAGMENT) organism=? DNA sequence DC(S-82):DG(T82) DC(S-81):DG(T81) DA(S-80):DT(T80) DA(S-79):DT(T79) DA(S-78):DT(T78) DA(S-77):DT(T77) DA(S-76):DT(T76) DA(S-75):DT(T75) DA(S-74):DT(T74) DA(S-73):DT(T73) DA(S-72):DT(T72) DA(S-71):DT(T71) DC(S-70):DG(T70) DA(S-69):DT(T69) DG(S-68):DC(T68) DC(S-67):DG(T67) DA(S-66):DT(T66) DT(S-65):DA(T65) DC(S-64):DG(T64) DC(S-63):DG(T63) DC(S-62):DG(T62) DG(S-61):DC(T61) DG(S-60):DC(T60) DT(S-59):DA(T59) DG(S-58):DC(T58) DC(S-57):DG(T57) DC(S-56):DG(T56) DG(S-55):DC(T55) DA(S-54):DT(T54) DG(S-53):DC(T53) DG(S-52):DC(T52) DC(S-51):DG(T51) DC(S-50):DG(T50) DG(S-49):DC(T49) DC(S-48):DG(T48) DT(S-47):DA(T47) DC(S-46):DG(T46) DA(S-45):DT(T45) DA(S-44):DT(T44) DT(S-43):DA(T43) DT(S-42):DA(T42) DG(S-41):DC(T41) DG(S-40):DC(T40) DT(S-39):DA(T39) DC(S-38):DG(T38) DG(S-37):DC(T37) DT(S-36):DA(T36) DA(S-35):DT(T35) DG(S-34):DC(T34) DA(S-33):DT(T33) DC(S-32):DG(T32) DA(S-31):DT(T31) DG(S-30):DC(T30) DC(S-29):DG(T29) DT(S-28):DA(T28) DC(S-27):DG(T27) DT(S-26):DA(T26) DA(S-25):DT(T25) DG(S-24):DC(T24) DC(S-23):DG(T23) DA(S-22):DT(T22) DC(S-21):DG(T21) DC(S-20):DG(T20) DG(S-19):DC(T19) DC(S-18):DG(T18) DT(S-17):DA(T17) DT(S-16):DA(T16) DA(S-15):DT(T15) DA(S-14):DT(T14) DA(S-13):DT(T13) DC(S-12):DG(T12) DG(S-11):DC(T11) DC(S-10):DG(T10) DA(S-9):DT(T9) DC(S-8):DG(T8) DG(S-7):DC(T7) DT(S-6):DA(T6) DA(S-5):DT(T5) DC(S-4):DG(T4) DG(S-3):DC(T3) DC(S-2):DG(T2) DG(S-1):DC(T1) DC(S0):DG(T0) DT(S1):DA(T-1) DG(S2):DC(T-2) DT(S3):DA(T-3) DC(S4):DG(T-4) DT(S5):DA(T-5) DA(S6):DT(T-6) DC(S7):DG(T-7) DC(S8):DG(T-8) DG(S9):DC(T-9) DC(S10):DG(T-10) DG(S11):DC(T-11) DT(S12):DA(T-12) DT(S13):DA(T-13) DT(S14):DA(T-14) DT(S15):DA(T-15) DA(S16):DT(T-16) DA(S17):DT(T-17) DC(S18):DG(T-18) DC(S19):DG(T-19) DG(S20):DC(T-20) DC(S21):DG(T-21) DC(S22):DG(T-22) DA(S23):DT(T-23) DC(S24):DG(T-24) DT(S25):DA(T-25) DA(S26):DT(T-26) DG(S27):DC(T-27) DA(S28):DT(T-28) DA(S29):DT(T-29) DG(S30):DC(T-30) DC(S31):DG(T-31) DG(S32):DC(T-32) DC(S33):DG(T-33) DT(S34):DA(T-34) DT(S35):DA(T-35) DA(S36):DT(T-36) DC(S37):DG(T-37) DT(S38):DA(T-38) DA(S39):DT(T-39) DG(S40):DC(T-40) DT(S41):DA(T-41) DC(S42):DG(T-42) DT(S43):DA(T-43) DC(S44):DG(T-44) DC(S45):DG(T-45) DA(S46):DT(T-46) DG(S47):DC(T-47) DG(S48):DC(T-48) DC(S49):DG(T-49) DA(S50):DT(T-50) DC(S51):DG(T-51) DG(S52):DC(T-52) DT(S53):DA(T-53) DG(S54):DC(T-54) DT(S55):DA(T-55) DG(S56):DC(T-56) DA(S57):DT(T-57) DG(S58):DC(T-58) DA(S59):DT(T-59) DC(S60):DG(T-60) DC(S61):DG(T-61) DG(S62):DC(T-62) DG(S63):DC(T-63) DC(S64):DG(T-64) DA(S65):DT(T-65) DC(S66):DG(T-66) DA(S67):DT(T-67) DT(S68):DA(T-68) DG(S69):DC(T-69) DC(S70):DG(T-70) DA(S71):DT(T-71) DA(S72):DT(T-72) DA(S73):DT(T-73) DA(S74):DT(T-74) DA(S75):DT(T-75) DA(S76):DT(T-76) DA(S77):DT(T-77) DA(S78):DT(T-78) DA(S79):DT(T-79) DA(S80):DT(T-80) DC(S81):DG(T-81) DG(S82):DC(T-82) chainK ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 12) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG42 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsRkesysiyvYkvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7xvl_efghijkl:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1.0 LINKER HISTONE ASSEMBLY (STICKY- 169AN DNA FRAGMENT) organism=? DNA sequence DC(n-82):DG(m82) DG(n-81):DC(m81) DT(n-80):DA(m80) DT(n-79):DA(m79) DT(n-78):DA(m78) DT(n-77):DA(m77) DT(n-76):DA(m76) DT(n-75):DA(m75) DT(n-74):DA(m74) DT(n-73):DA(m73) DT(n-72):DA(m72) DT(n-71):DA(m71) DG(n-70):DC(m70) DC(n-69):DG(m69) DA(n-68):DT(m68) DT(n-67):DA(m67) DG(n-66):DC(m66) DT(n-65):DA(m65) DG(n-64):DC(m64) DC(n-63):DG(m63) DC(n-62):DG(m62) DG(n-61):DC(m61) DG(n-60):DC(m60) DT(n-59):DA(m59) DC(n-58):DG(m58) DT(n-57):DA(m57) DC(n-56):DG(m56) DA(n-55):DT(m55) DC(n-54):DG(m54) DA(n-53):DT(m53) DC(n-52):DG(m52) DG(n-51):DC(m51) DT(n-50):DA(m50) DG(n-49):DC(m49) DC(n-48):DG(m48) DC(n-47):DG(m47) DT(n-46):DA(m46) DG(n-45):DC(m45) DG(n-44):DC(m44) DA(n-43):DT(m43) DG(n-42):DC(m42) DA(n-41):DT(m41) DC(n-40):DG(m40) DT(n-39):DA(m39) DA(n-38):DT(m38) DG(n-37):DC(m37) DT(n-36):DA(m36) DA(n-35):DT(m35) DA(n-34):DT(m34) DG(n-33):DC(m33) DC(n-32):DG(m32) DG(n-31):DC(m31) DC(n-30):DG(m30) DT(n-29):DA(m29) DT(n-28):DA(m28) DC(n-27):DG(m27) DT(n-26):DA(m26) DA(n-25):DT(m25) DG(n-24):DC(m24) DT(n-23):DA(m23) DG(n-22):DC(m22) DG(n-21):DC(m21) DC(n-20):DG(m20) DG(n-19):DC(m19) DG(n-18):DC(m18) DT(n-17):DA(m17) DT(n-16):DA(m16) DA(n-15):DT(m15) DA(n-14):DT(m14) DA(n-13):DT(m13) DA(n-12):DT(m12) DC(n-11):DG(m11) DG(n-10):DC(m10) DC(n-9):DG(m9) DG(n-8):DC(m8) DG(n-7):DC(m7) DT(n-6):DA(m6) DA(n-5):DT(m5) DG(n-4):DC(m4) DA(n-3):DT(m3) DC(n-2):DG(m2) DA(n-1):DT(m1) DG(n0):DC(m0) DC(n1):DG(m-1) DG(n2):DC(m-2) DC(n3):DG(m-3) DG(n4):DC(m-4) DT(n5):DA(m-5) DA(n6):DT(m-6) DC(n7):DG(m-7) DG(n8):DC(m-8) DT(n9):DA(m-9) DG(n10):DC(m-10) DC(n11):DG(m-11) DG(n12):DC(m-12) DT(n13):DA(m-13) DT(n14):DA(m-14) DT(n15):DA(m-15) DA(n16):DT(m-16) DA(n17):DT(m-17) DG(n18):DC(m-18) DC(n19):DG(m-19) DG(n20):DC(m-20) DG(n21):DC(m-21) DT(n22):DA(m-22) DG(n23):DC(m-23) DC(n24):DG(m-24) DT(n25):DA(m-25) DA(n26):DT(m-26) DG(n27):DC(m-27) DA(n28):DT(m-28) DG(n29):DC(m-29) DC(n30):DG(m-30) DT(n31):DA(m-31) DG(n32):DC(m-32) DT(n33):DA(m-33) DC(n34):DG(m-34) DT(n35):DA(m-35) DA(n36):DT(m-36) DC(n37):DG(m-37) DG(n38):DC(m-38) DA(n39):DT(m-39) DC(n40):DG(m-40) DC(n41):DG(m-41) DA(n42):DT(m-42) DA(n43):DT(m-43) DT(n44):DA(m-44) DT(n45):DA(m-45) DG(n46):DC(m-46) DA(n47):DT(m-47) DG(n48):DC(m-48) DC(n49):DG(m-49) DG(n50):DC(m-50) DG(n51):DC(m-51) DC(n52):DG(m-52) DC(n53):DG(m-53) DT(n54):DA(m-54) DC(n55):DG(m-55) DG(n56):DC(m-56) DG(n57):DC(m-57) DC(n58):DG(m-58) DA(n59):DT(m-59) DC(n60):DG(m-60) DC(n61):DG(m-61) DG(n62):DC(m-62) DG(n63):DC(m-63) DG(n64):DC(m-64) DA(n65):DT(m-65) DT(n66):DA(m-66) DG(n67):DC(m-67) DC(n68):DG(m-68) DT(n69):DA(m-69) DG(n70):DC(m-70) DT(n71):DA(m-71) DT(n72):DA(m-72) DT(n73):DA(m-73) DT(n74):DA(m-74) DT(n75):DA(m-75) DT(n76):DA(m-76) DT(n77):DA(m-77) DT(n78):DA(m-78) DT(n79):DA(m-79) DT(n80):DA(m-80) DG(n81):DC(m-81) DG(n82):DC(m-82) chaine ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainf ( 12) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaing ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainh chaini ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainj ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaink ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainl ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/KrsrkesysiyvykvlkqvhpdtgisskamgImnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7xvl_j:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1.0 LINKER HISTONE ASSEMBLY (STICKY- 169AN DNA FRAGMENT) organism=? DNA sequence DC(n-82):DG(m82) DG(n-81):DC(m81) DT(n-80):DA(m80) DT(n-79):DA(m79) DT(n-78):DA(m78) DT(n-77):DA(m77) DT(n-76):DA(m76) DT(n-75):DA(m75) DT(n-74):DA(m74) DT(n-73):DA(m73) DT(n-72):DA(m72) DT(n-71):DA(m71) DG(n-70):DC(m70) DC(n-69):DG(m69) DA(n-68):DT(m68) DT(n-67):DA(m67) DG(n-66):DC(m66) DT(n-65):DA(m65) DG(n-64):DC(m64) DC(n-63):DG(m63) DC(n-62):DG(m62) DG(n-61):DC(m61) DG(n-60):DC(m60) DT(n-59):DA(m59) DC(n-58):DG(m58) DT(n-57):DA(m57) DC(n-56):DG(m56) DA(n-55):DT(m55) DC(n-54):DG(m54) DA(n-53):DT(m53) DC(n-52):DG(m52) DG(n-51):DC(m51) DT(n-50):DA(m50) DG(n-49):DC(m49) DC(n-48):DG(m48) DC(n-47):DG(m47) DT(n-46):DA(m46) DG(n-45):DC(m45) DG(n-44):DC(m44) DA(n-43):DT(m43) DG(n-42):DC(m42) DA(n-41):DT(m41) DC(n-40):DG(m40) DT(n-39):DA(m39) DA(n-38):DT(m38) DG(n-37):DC(m37) DT(n-36):DA(m36) DA(n-35):DT(m35) DA(n-34):DT(m34) DG(n-33):DC(m33) DC(n-32):DG(m32) DG(n-31):DC(m31) DC(n-30):DG(m30) DT(n-29):DA(m29) DT(n-28):DA(m28) DC(n-27):DG(m27) DT(n-26):DA(m26) DA(n-25):DT(m25) DG(n-24):DC(m24) DT(n-23):DA(m23) DG(n-22):DC(m22) DG(n-21):DC(m21) DC(n-20):DG(m20) DG(n-19):DC(m19) DG(n-18):DC(m18) DT(n-17):DA(m17) DT(n-16):DA(m16) DA(n-15):DT(m15) DA(n-14):DT(m14) DA(n-13):DT(m13) DA(n-12):DT(m12) DC(n-11):DG(m11) DG(n-10):DC(m10) DC(n-9):DG(m9) DG(n-8):DC(m8) DG(n-7):DC(m7) DT(n-6):DA(m6) DA(n-5):DT(m5) DG(n-4):DC(m4) DA(n-3):DT(m3) DC(n-2):DG(m2) DA(n-1):DT(m1) DG(n0):DC(m0) DC(n1):DG(m-1) DG(n2):DC(m-2) DC(n3):DG(m-3) DG(n4):DC(m-4) DT(n5):DA(m-5) DA(n6):DT(m-6) DC(n7):DG(m-7) DG(n8):DC(m-8) DT(n9):DA(m-9) DG(n10):DC(m-10) DC(n11):DG(m-11) DG(n12):DC(m-12) DT(n13):DA(m-13) DT(n14):DA(m-14) DT(n15):DA(m-15) DA(n16):DT(m-16) DA(n17):DT(m-17) DG(n18):DC(m-18) DC(n19):DG(m-19) DG(n20):DC(m-20) DG(n21):DC(m-21) DT(n22):DA(m-22) DG(n23):DC(m-23) DC(n24):DG(m-24) DT(n25):DA(m-25) DA(n26):DT(m-26) DG(n27):DC(m-27) DA(n28):DT(m-28) DG(n29):DC(m-29) DC(n30):DG(m-30) DT(n31):DA(m-31) DG(n32):DC(m-32) DT(n33):DA(m-33) DC(n34):DG(m-34) DT(n35):DA(m-35) DA(n36):DT(m-36) DC(n37):DG(m-37) DG(n38):DC(m-38) DA(n39):DT(m-39) DC(n40):DG(m-40) DC(n41):DG(m-41) DA(n42):DT(m-42) DA(n43):DT(m-43) DT(n44):DA(m-44) DT(n45):DA(m-45) DG(n46):DC(m-46) DA(n47):DT(m-47) DG(n48):DC(m-48) DC(n49):DG(m-49) DG(n50):DC(m-50) DG(n51):DC(m-51) DC(n52):DG(m-52) DC(n53):DG(m-53) DT(n54):DA(m-54) DC(n55):DG(m-55) DG(n56):DC(m-56) DG(n57):DC(m-57) DC(n58):DG(m-58) DA(n59):DT(m-59) DC(n60):DG(m-60) DC(n61):DG(m-61) DG(n62):DC(m-62) DG(n63):DC(m-63) DG(n64):DC(m-64) DA(n65):DT(m-65) DT(n66):DA(m-66) DG(n67):DC(m-67) DC(n68):DG(m-68) DT(n69):DA(m-69) DG(n70):DC(m-70) DT(n71):DA(m-71) DT(n72):DA(m-72) DT(n73):DA(m-73) DT(n74):DA(m-74) DT(n75):DA(m-75) DT(n76):DA(m-76) DT(n77):DA(m-77) DT(n78):DA(m-78) DT(n79):DA(m-79) DT(n80):DA(m-80) DG(n81):DC(m-81) DG(n82):DC(m-82) chainj ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >7xvm_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H5 LINKER HISTONE ASSEMBLY (STICKY- 169A DNA FRAGMENT) organism=? DNA sequence DG(J-82):DC(I82) DC(J-81):DG(I81) DT(J-80):DA(I80) DT(J-79):DA(I79) DT(J-78):DA(I78) DT(J-77):DA(I77) DT(J-76):DA(I76) DT(J-75):DA(I75) DT(J-74):DA(I74) DT(J-73):DA(I73) DT(J-72):DA(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DG(J68):DC(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DA(J72):DT(I-72) DA(J73):DT(I-73) DA(J74):DT(I-74) DA(J75):DT(I-75) DA(J76):DT(I-76) DA(J77):DT(I-77) DA(J78):DT(I-78) DA(J79):DT(I-79) DA(J80):DT(I-80) DG(J81):DC(I-81) DC(J82):DG(I-82) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 31) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 20) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 3) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 1) LYS28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/akrhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/RkrsrkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/krhrkvlrdniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/raKaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkteshh/Krkrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7xvm_C:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H5 LINKER HISTONE ASSEMBLY (STICKY- 169A DNA FRAGMENT) organism=? DNA sequence DG(I-82):DC(J82) DC(I-81):DG(J81) DT(I-80):DA(J80) DT(I-79):DA(J79) DT(I-78):DA(J78) DT(I-77):DA(J77) DT(I-76):DA(J76) DT(I-75):DA(J75) DT(I-74):DA(J74) DT(I-73):DA(J73) DT(I-72):DA(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DC(I-68):DG(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DG(I68):DC(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DA(I72):DT(J-72) DA(I73):DT(J-73) DA(I74):DT(J-74) DA(I75):DT(J-75) DA(I76):DT(J-76) DA(I77):DT(J-77) DA(I78):DT(J-78) DA(I79):DT(J-79) DA(I80):DT(J-80) DG(I81):DC(J-81) DC(I82):DG(J-82) chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk >7xvn_C:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL BASIS FOR DNA RECOGNITION FEATURE OF RETINOID-RELATED ORPHAN RECEPTORS organism=Mus musculus DNA sequence DC(E620):DG(F628) DA(E621):DT(F627) DT(E622):DA(F626) DG(E623):DC(F625) DA(E624):DT(F624) DC(E625):DG(F623) DC(E626):DG(F622) DT(E627):DA(F621) DA(E628):DT(F620) DC(E629):DG(F619) DT(E630):DA(F618) DG(E631):DC(F617) DA(E632):DT(F616) DC(E633):DG(F615) DC(E634):DG(F614) DT(E635):DA(F613) DA(E636):DT(F612) DG(E637):DC(F611) chainC ( 23) GLU49 0 0 0 0 6 9 2 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS52 0 0 0 0 0 1 10 3 0 0 0 0 0 0 0 0 0 0 ( 30) ARG56 0 0 0 0 3 10 2 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG57 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) PHE103 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 77) ARG105 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence evipckicgdkssgihygvitcEgcKgffRRsqqcaysctrqqncpidrtsrnrcqhcrlqkclalgmsrdavkFgRmskk >7xvn_CD: title=STRUCTURAL BASIS FOR DNA RECOGNITION FEATURE OF RETINOID-RELATED ORPHAN RECEPTORS organism=Mus musculus DNA sequence DC(F611):DG(E637) DT(F612):DA(E636) DA(F613):DT(E635) DG(F614):DC(E634) DG(F615):DC(E633) DT(F616):DA(E632) DC(F617):DG(E631) DA(F618):DT(E630) DG(F619):DC(E629) DT(F620):DA(E628) DA(F621):DT(E627) DG(F622):DC(E626) DG(F623):DC(E625) DT(F624):DA(E624) DC(F625):DG(E623) DA(F626):DT(E622) DT(F627):DA(E621) DG(F628):DC(E620) chainC ( 23) GLU49 0 0 0 0 0 0 0 0 0 0 0 2 9 6 0 0 0 0 ( 26) LYS52 0 0 0 0 0 0 0 0 0 0 3 10 1 0 0 0 0 0 ( 30) ARG56 0 0 0 0 0 0 0 0 0 0 0 2 10 3 0 0 0 0 ( 31) ARG57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 ( 75) PHE103 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 77) ARG105 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainD ( 22) GLU49 0 0 0 2 11 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS52 0 0 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG56 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG57 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 prot.sequence evipckicgdkssgihygvitcEgcKgffRRsqqcaysctrqqncpidrtsrnrcqhcrlqkclalgmsrdavkFgRmskk/vipckicgdkssgihygvitcEgcKgffRRsqqvaysctrqqncpidrtsrnrcqhcrlqkclalgmsr >7xx5_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1.3 LINKER HISTONE ASSEMBLY (STICKY- 169A DNA FRAGMENT) organism=? DNA sequence DG(J-82):DC(I82) DC(J-81):DG(I81) DT(J-80):DA(I80) DT(J-79):DA(I79) DT(J-78):DA(I78) DT(J-77):DA(I77) DT(J-76):DA(I76) DT(J-75):DA(I75) DT(J-74):DA(I74) DT(J-73):DA(I73) DT(J-72):DA(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DG(J68):DC(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DA(J72):DT(I-72) DA(J73):DT(I-73) DA(J74):DT(I-74) DA(J75):DT(I-75) DA(J76):DT(I-76) DA(J77):DT(I-77) DA(J78):DT(I-78) DA(J79):DT(I-79) DA(J80):DT(I-80) DG(J81):DC(I-81) DC(J82):DG(I-82) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 27) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 6) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrPgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdnIQgItkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/gkkRkrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/trssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/gkkrkRsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7xx5_KLMNOPQR:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1.3 LINKER HISTONE ASSEMBLY (STICKY- 169A DNA FRAGMENT) organism=? DNA sequence DG(S-82):DC(T82) DC(S-81):DG(T81) DT(S-80):DA(T80) DT(S-79):DA(T79) DT(S-78):DA(T78) DT(S-77):DA(T77) DT(S-76):DA(T76) DT(S-75):DA(T75) DT(S-74):DA(T74) DT(S-73):DA(T73) DT(S-72):DA(T72) DT(S-71):DA(T71) DC(S-70):DG(T70) DA(S-69):DT(T69) DC(S-68):DG(T68) DA(S-67):DT(T67) DA(S-66):DT(T66) DT(S-65):DA(T65) DC(S-64):DG(T64) DC(S-63):DG(T63) DC(S-62):DG(T62) DG(S-61):DC(T61) DG(S-60):DC(T60) DT(S-59):DA(T59) DG(S-58):DC(T58) DC(S-57):DG(T57) DC(S-56):DG(T56) DG(S-55):DC(T55) DA(S-54):DT(T54) DG(S-53):DC(T53) DG(S-52):DC(T52) DC(S-51):DG(T51) DC(S-50):DG(T50) DG(S-49):DC(T49) DC(S-48):DG(T48) DT(S-47):DA(T47) DC(S-46):DG(T46) DA(S-45):DT(T45) DA(S-44):DT(T44) DT(S-43):DA(T43) DT(S-42):DA(T42) DG(S-41):DC(T41) DG(S-40):DC(T40) DT(S-39):DA(T39) DC(S-38):DG(T38) DG(S-37):DC(T37) DT(S-36):DA(T36) DA(S-35):DT(T35) DG(S-34):DC(T34) DA(S-33):DT(T33) DC(S-32):DG(T32) DA(S-31):DT(T31) DG(S-30):DC(T30) DC(S-29):DG(T29) DT(S-28):DA(T28) DC(S-27):DG(T27) DT(S-26):DA(T26) DA(S-25):DT(T25) DG(S-24):DC(T24) DC(S-23):DG(T23) DA(S-22):DT(T22) DC(S-21):DG(T21) DC(S-20):DG(T20) DG(S-19):DC(T19) DC(S-18):DG(T18) DT(S-17):DA(T17) DT(S-16):DA(T16) DA(S-15):DT(T15) DA(S-14):DT(T14) DA(S-13):DT(T13) DC(S-12):DG(T12) DG(S-11):DC(T11) DC(S-10):DG(T10) DA(S-9):DT(T9) DC(S-8):DG(T8) DG(S-7):DC(T7) DT(S-6):DA(T6) DA(S-5):DT(T5) DC(S-4):DG(T4) DG(S-3):DC(T3) DG(S-2):DC(T2) DA(S-1):DT(T1) DA(S0):DT(T0) DT(S1):DA(T-1) DC(S2):DG(T-2) DC(S3):DG(T-3) DG(S4):DC(T-4) DT(S5):DA(T-5) DA(S6):DT(T-6) DC(S7):DG(T-7) DG(S8):DC(T-8) DT(S9):DA(T-9) DG(S10):DC(T-10) DC(S11):DG(T-11) DG(S12):DC(T-12) DT(S13):DA(T-13) DT(S14):DA(T-14) DT(S15):DA(T-15) DA(S16):DT(T-16) DA(S17):DT(T-17) DG(S18):DC(T-18) DC(S19):DG(T-19) DG(S20):DC(T-20) DG(S21):DC(T-21) DT(S22):DA(T-22) DG(S23):DC(T-23) DC(S24):DG(T-24) DT(S25):DA(T-25) DA(S26):DT(T-26) DG(S27):DC(T-27) DA(S28):DT(T-28) DG(S29):DC(T-29) DC(S30):DG(T-30) DT(S31):DA(T-31) DG(S32):DC(T-32) DT(S33):DA(T-33) DC(S34):DG(T-34) DT(S35):DA(T-35) DA(S36):DT(T-36) DC(S37):DG(T-37) DG(S38):DC(T-38) DA(S39):DT(T-39) DC(S40):DG(T-40) DC(S41):DG(T-41) DA(S42):DT(T-42) DA(S43):DT(T-43) DT(S44):DA(T-44) DT(S45):DA(T-45) DG(S46):DC(T-46) DA(S47):DT(T-47) DG(S48):DC(T-48) DC(S49):DG(T-49) DG(S50):DC(T-50) DG(S51):DC(T-51) DC(S52):DG(T-52) DC(S53):DG(T-53) DT(S54):DA(T-54) DC(S55):DG(T-55) DG(S56):DC(T-56) DG(S57):DC(T-57) DC(S58):DG(T-58) DA(S59):DT(T-59) DC(S60):DG(T-60) DC(S61):DG(T-61) DG(S62):DC(T-62) DG(S63):DC(T-63) DG(S64):DC(T-64) DA(S65):DT(T-65) DT(S66):DA(T-66) DT(S67):DA(T-67) DG(S68):DC(T-68) DT(S69):DA(T-69) DG(S70):DC(T-70) DA(S71):DT(T-71) DA(S72):DT(T-72) DA(S73):DT(T-73) DA(S74):DT(T-74) DA(S75):DT(T-75) DA(S76):DT(T-76) DA(S77):DT(T-77) DA(S78):DT(T-78) DA(S79):DT(T-79) DA(S80):DT(T-80) DG(S81):DC(T-81) DC(S82):DG(T-82) chainK ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainO ( 4) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP chainQ ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 4) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/gkkrkrsrkesysiyvykvlkqvhpdtgIsskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kkpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdnIQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/gkkRKrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7xx5_R:Histone-fold; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1.3 LINKER HISTONE ASSEMBLY (STICKY- 169A DNA FRAGMENT) organism=? DNA sequence DG(S-82):DC(T82) DC(S-81):DG(T81) DT(S-80):DA(T80) DT(S-79):DA(T79) DT(S-78):DA(T78) DT(S-77):DA(T77) DT(S-76):DA(T76) DT(S-75):DA(T75) DT(S-74):DA(T74) DT(S-73):DA(T73) DT(S-72):DA(T72) DT(S-71):DA(T71) DC(S-70):DG(T70) DA(S-69):DT(T69) DC(S-68):DG(T68) DA(S-67):DT(T67) DA(S-66):DT(T66) DT(S-65):DA(T65) DC(S-64):DG(T64) DC(S-63):DG(T63) DC(S-62):DG(T62) DG(S-61):DC(T61) DG(S-60):DC(T60) DT(S-59):DA(T59) DG(S-58):DC(T58) DC(S-57):DG(T57) DC(S-56):DG(T56) DG(S-55):DC(T55) DA(S-54):DT(T54) DG(S-53):DC(T53) DG(S-52):DC(T52) DC(S-51):DG(T51) DC(S-50):DG(T50) DG(S-49):DC(T49) DC(S-48):DG(T48) DT(S-47):DA(T47) DC(S-46):DG(T46) DA(S-45):DT(T45) DA(S-44):DT(T44) DT(S-43):DA(T43) DT(S-42):DA(T42) DG(S-41):DC(T41) DG(S-40):DC(T40) DT(S-39):DA(T39) DC(S-38):DG(T38) DG(S-37):DC(T37) DT(S-36):DA(T36) DA(S-35):DT(T35) DG(S-34):DC(T34) DA(S-33):DT(T33) DC(S-32):DG(T32) DA(S-31):DT(T31) DG(S-30):DC(T30) DC(S-29):DG(T29) DT(S-28):DA(T28) DC(S-27):DG(T27) DT(S-26):DA(T26) DA(S-25):DT(T25) DG(S-24):DC(T24) DC(S-23):DG(T23) DA(S-22):DT(T22) DC(S-21):DG(T21) DC(S-20):DG(T20) DG(S-19):DC(T19) DC(S-18):DG(T18) DT(S-17):DA(T17) DT(S-16):DA(T16) DA(S-15):DT(T15) DA(S-14):DT(T14) DA(S-13):DT(T13) DC(S-12):DG(T12) DG(S-11):DC(T11) DC(S-10):DG(T10) DA(S-9):DT(T9) DC(S-8):DG(T8) DG(S-7):DC(T7) DT(S-6):DA(T6) DA(S-5):DT(T5) DC(S-4):DG(T4) DG(S-3):DC(T3) DG(S-2):DC(T2) DA(S-1):DT(T1) DA(S0):DT(T0) DT(S1):DA(T-1) DC(S2):DG(T-2) DC(S3):DG(T-3) DG(S4):DC(T-4) DT(S5):DA(T-5) DA(S6):DT(T-6) DC(S7):DG(T-7) DG(S8):DC(T-8) DT(S9):DA(T-9) DG(S10):DC(T-10) DC(S11):DG(T-11) DG(S12):DC(T-12) DT(S13):DA(T-13) DT(S14):DA(T-14) DT(S15):DA(T-15) DA(S16):DT(T-16) DA(S17):DT(T-17) DG(S18):DC(T-18) DC(S19):DG(T-19) DG(S20):DC(T-20) DG(S21):DC(T-21) DT(S22):DA(T-22) DG(S23):DC(T-23) DC(S24):DG(T-24) DT(S25):DA(T-25) DA(S26):DT(T-26) DG(S27):DC(T-27) DA(S28):DT(T-28) DG(S29):DC(T-29) DC(S30):DG(T-30) DT(S31):DA(T-31) DG(S32):DC(T-32) DT(S33):DA(T-33) DC(S34):DG(T-34) DT(S35):DA(T-35) DA(S36):DT(T-36) DC(S37):DG(T-37) DG(S38):DC(T-38) DA(S39):DT(T-39) DC(S40):DG(T-40) DC(S41):DG(T-41) DA(S42):DT(T-42) DA(S43):DT(T-43) DT(S44):DA(T-44) DT(S45):DA(T-45) DG(S46):DC(T-46) DA(S47):DT(T-47) DG(S48):DC(T-48) DC(S49):DG(T-49) DG(S50):DC(T-50) DG(S51):DC(T-51) DC(S52):DG(T-52) DC(S53):DG(T-53) DT(S54):DA(T-54) DC(S55):DG(T-55) DG(S56):DC(T-56) DG(S57):DC(T-57) DC(S58):DG(T-58) DA(S59):DT(T-59) DC(S60):DG(T-60) DC(S61):DG(T-61) DG(S62):DC(T-62) DG(S63):DC(T-63) DG(S64):DC(T-64) DA(S65):DT(T-65) DT(S66):DA(T-66) DT(S67):DA(T-67) DG(S68):DC(T-68) DT(S69):DA(T-69) DG(S70):DC(T-70) DA(S71):DT(T-71) DA(S72):DT(T-72) DA(S73):DT(T-73) DA(S74):DT(T-74) DA(S75):DT(T-75) DA(S76):DT(T-76) DA(S77):DT(T-77) DA(S78):DT(T-78) DA(S79):DT(T-79) DA(S80):DT(T-80) DG(S81):DC(T-81) DC(S82):DG(T-82) chainR ( 4) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gkkRKrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7xx6_BCDEFGHo:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1.0 LINKER HISTONE ASSEMBLY (STICKY- 169A DNA FRAGMENT) organism=? DNA sequence DG(I-82):DC(J82) DC(I-81):DG(J81) DT(I-80):DA(J80) DT(I-79):DA(J79) DT(I-78):DA(J78) DT(I-77):DA(J77) DT(I-76):DA(J76) DT(I-75):DA(J75) DT(I-74):DA(J74) DT(I-73):DA(J73) DT(I-72):DA(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DC(I-68):DG(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DG(I68):DC(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DA(I72):DT(J-72) DA(I73):DT(J-73) DA(I74):DT(J-74) DA(I75):DT(J-75) DA(I76):DT(J-76) DA(I77):DT(J-77) DA(I78):DT(J-78) DA(I79):DT(J-79) DA(I80):DT(J-80) DG(I81):DC(J-81) DC(I82):DG(J-82) chainB chainC ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 27) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 36) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaino ( 43) GLN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkt/kkrkrsrkesysiyvykvlkqvhpdtgiSskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ggkarakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkt/kkrKrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/hpkysdmivaaiqaeknragssrqsiqkyikshykvgenadsQiklsikrlvttgvlkqtkgvgasgsfrlaksde >7xx6_KLMNOPQR:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1.0 LINKER HISTONE ASSEMBLY (STICKY- 169A DNA FRAGMENT) organism=? DNA sequence DG(S-82):DC(T82) DC(S-81):DG(T81) DT(S-80):DA(T80) DT(S-79):DA(T79) DT(S-78):DA(T78) DT(S-77):DA(T77) DT(S-76):DA(T76) DT(S-75):DA(T75) DT(S-74):DA(T74) DT(S-73):DA(T73) DT(S-72):DA(T72) DT(S-71):DA(T71) DC(S-70):DG(T70) DA(S-69):DT(T69) DC(S-68):DG(T68) DA(S-67):DT(T67) DA(S-66):DT(T66) DT(S-65):DA(T65) DC(S-64):DG(T64) DC(S-63):DG(T63) DC(S-62):DG(T62) DG(S-61):DC(T61) DG(S-60):DC(T60) DT(S-59):DA(T59) DG(S-58):DC(T58) DC(S-57):DG(T57) DC(S-56):DG(T56) DG(S-55):DC(T55) DA(S-54):DT(T54) DG(S-53):DC(T53) DG(S-52):DC(T52) DC(S-51):DG(T51) DC(S-50):DG(T50) DG(S-49):DC(T49) DC(S-48):DG(T48) DT(S-47):DA(T47) DC(S-46):DG(T46) DA(S-45):DT(T45) DA(S-44):DT(T44) DT(S-43):DA(T43) DT(S-42):DA(T42) DG(S-41):DC(T41) DG(S-40):DC(T40) DT(S-39):DA(T39) DC(S-38):DG(T38) DG(S-37):DC(T37) DT(S-36):DA(T36) DA(S-35):DT(T35) DG(S-34):DC(T34) DA(S-33):DT(T33) DC(S-32):DG(T32) DA(S-31):DT(T31) DG(S-30):DC(T30) DC(S-29):DG(T29) DT(S-28):DA(T28) DC(S-27):DG(T27) DT(S-26):DA(T26) DA(S-25):DT(T25) DG(S-24):DC(T24) DC(S-23):DG(T23) DA(S-22):DT(T22) DC(S-21):DG(T21) DC(S-20):DG(T20) DG(S-19):DC(T19) DC(S-18):DG(T18) DT(S-17):DA(T17) DT(S-16):DA(T16) DA(S-15):DT(T15) DA(S-14):DT(T14) DA(S-13):DT(T13) DC(S-12):DG(T12) DG(S-11):DC(T11) DC(S-10):DG(T10) DA(S-9):DT(T9) DC(S-8):DG(T8) DG(S-7):DC(T7) DT(S-6):DA(T6) DA(S-5):DT(T5) DC(S-4):DG(T4) DG(S-3):DC(T3) DG(S-2):DC(T2) DA(S-1):DT(T1) DA(S0):DT(T0) DT(S1):DA(T-1) DC(S2):DG(T-2) DC(S3):DG(T-3) DG(S4):DC(T-4) DT(S5):DA(T-5) DA(S6):DT(T-6) DC(S7):DG(T-7) DG(S8):DC(T-8) DT(S9):DA(T-9) DG(S10):DC(T-10) DC(S11):DG(T-11) DG(S12):DC(T-12) DT(S13):DA(T-13) DT(S14):DA(T-14) DT(S15):DA(T-15) DA(S16):DT(T-16) DA(S17):DT(T-17) DG(S18):DC(T-18) DC(S19):DG(T-19) DG(S20):DC(T-20) DG(S21):DC(T-21) DT(S22):DA(T-22) DG(S23):DC(T-23) DC(S24):DG(T-24) DT(S25):DA(T-25) DA(S26):DT(T-26) DG(S27):DC(T-27) DA(S28):DT(T-28) DG(S29):DC(T-29) DC(S30):DG(T-30) DT(S31):DA(T-31) DG(S32):DC(T-32) DT(S33):DA(T-33) DC(S34):DG(T-34) DT(S35):DA(T-35) DA(S36):DT(T-36) DC(S37):DG(T-37) DG(S38):DC(T-38) DA(S39):DT(T-39) DC(S40):DG(T-40) DC(S41):DG(T-41) DA(S42):DT(T-42) DA(S43):DT(T-43) DT(S44):DA(T-44) DT(S45):DA(T-45) DG(S46):DC(T-46) DA(S47):DT(T-47) DG(S48):DC(T-48) DC(S49):DG(T-49) DG(S50):DC(T-50) DG(S51):DC(T-51) DC(S52):DG(T-52) DC(S53):DG(T-53) DT(S54):DA(T-54) DC(S55):DG(T-55) DG(S56):DC(T-56) DG(S57):DC(T-57) DC(S58):DG(T-58) DA(S59):DT(T-59) DC(S60):DG(T-60) DC(S61):DG(T-61) DG(S62):DC(T-62) DG(S63):DC(T-63) DG(S64):DC(T-64) DA(S65):DT(T-65) DT(S66):DA(T-66) DT(S67):DA(T-67) DG(S68):DC(T-68) DT(S69):DA(T-69) DG(S70):DC(T-70) DA(S71):DT(T-71) DA(S72):DT(T-72) DA(S73):DT(T-73) DA(S74):DT(T-74) DA(S75):DT(T-75) DA(S76):DT(T-76) DA(S77):DT(T-77) DA(S78):DT(T-78) DA(S79):DT(T-79) DA(S80):DT(T-80) DG(S81):DC(T-81) DC(S82):DG(T-82) chainK ( 4) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 2) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG42 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP chainQ ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 3) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkpHRyrPgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkt/kRkrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kpHRyRPgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdNIqGItkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krKrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7xx6_efghijkl:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1.0 LINKER HISTONE ASSEMBLY (STICKY- 169A DNA FRAGMENT) organism=? DNA sequence DG(n-82):DC(m82) DC(n-81):DG(m81) DT(n-80):DA(m80) DT(n-79):DA(m79) DT(n-78):DA(m78) DT(n-77):DA(m77) DT(n-76):DA(m76) DT(n-75):DA(m75) DT(n-74):DA(m74) DT(n-73):DA(m73) DT(n-72):DA(m72) DT(n-71):DA(m71) DC(n-70):DG(m70) DA(n-69):DT(m69) DC(n-68):DG(m68) DA(n-67):DT(m67) DA(n-66):DT(m66) DT(n-65):DA(m65) DC(n-64):DG(m64) DC(n-63):DG(m63) DC(n-62):DG(m62) DG(n-61):DC(m61) DG(n-60):DC(m60) DT(n-59):DA(m59) DG(n-58):DC(m58) DC(n-57):DG(m57) DC(n-56):DG(m56) DG(n-55):DC(m55) DA(n-54):DT(m54) DG(n-53):DC(m53) DG(n-52):DC(m52) DC(n-51):DG(m51) DC(n-50):DG(m50) DG(n-49):DC(m49) DC(n-48):DG(m48) DT(n-47):DA(m47) DC(n-46):DG(m46) DA(n-45):DT(m45) DA(n-44):DT(m44) DT(n-43):DA(m43) DT(n-42):DA(m42) DG(n-41):DC(m41) DG(n-40):DC(m40) DT(n-39):DA(m39) DC(n-38):DG(m38) DG(n-37):DC(m37) DT(n-36):DA(m36) DA(n-35):DT(m35) DG(n-34):DC(m34) DA(n-33):DT(m33) DC(n-32):DG(m32) DA(n-31):DT(m31) DG(n-30):DC(m30) DC(n-29):DG(m29) DT(n-28):DA(m28) DC(n-27):DG(m27) DT(n-26):DA(m26) DA(n-25):DT(m25) DG(n-24):DC(m24) DC(n-23):DG(m23) DA(n-22):DT(m22) DC(n-21):DG(m21) DC(n-20):DG(m20) DG(n-19):DC(m19) DC(n-18):DG(m18) DT(n-17):DA(m17) DT(n-16):DA(m16) DA(n-15):DT(m15) DA(n-14):DT(m14) DA(n-13):DT(m13) DC(n-12):DG(m12) DG(n-11):DC(m11) DC(n-10):DG(m10) DA(n-9):DT(m9) DC(n-8):DG(m8) DG(n-7):DC(m7) DT(n-6):DA(m6) DA(n-5):DT(m5) DC(n-4):DG(m4) DG(n-3):DC(m3) DG(n-2):DC(m2) DA(n-1):DT(m1) DT(n0):DA(m0) DT(n1):DA(m-1) DC(n2):DG(m-2) DC(n3):DG(m-3) DG(n4):DC(m-4) DT(n5):DA(m-5) DA(n6):DT(m-6) DC(n7):DG(m-7) DG(n8):DC(m-8) DT(n9):DA(m-9) DG(n10):DC(m-10) DC(n11):DG(m-11) DG(n12):DC(m-12) DT(n13):DA(m-13) DT(n14):DA(m-14) DT(n15):DA(m-15) DA(n16):DT(m-16) DA(n17):DT(m-17) DG(n18):DC(m-18) DC(n19):DG(m-19) DG(n20):DC(m-20) DG(n21):DC(m-21) DT(n22):DA(m-22) DG(n23):DC(m-23) DC(n24):DG(m-24) DT(n25):DA(m-25) DA(n26):DT(m-26) DG(n27):DC(m-27) DA(n28):DT(m-28) DG(n29):DC(m-29) DC(n30):DG(m-30) DT(n31):DA(m-31) DG(n32):DC(m-32) DT(n33):DA(m-33) DC(n34):DG(m-34) DT(n35):DA(m-35) DA(n36):DT(m-36) DC(n37):DG(m-37) DG(n38):DC(m-38) DA(n39):DT(m-39) DC(n40):DG(m-40) DC(n41):DG(m-41) DA(n42):DT(m-42) DA(n43):DT(m-43) DT(n44):DA(m-44) DT(n45):DA(m-45) DG(n46):DC(m-46) DA(n47):DT(m-47) DG(n48):DC(m-48) DC(n49):DG(m-49) DG(n50):DC(m-50) DG(n51):DC(m-51) DC(n52):DG(m-52) DC(n53):DG(m-53) DT(n54):DA(m-54) DC(n55):DG(m-55) DG(n56):DC(m-56) DG(n57):DC(m-57) DC(n58):DG(m-58) DA(n59):DT(m-59) DC(n60):DG(m-60) DC(n61):DG(m-61) DG(n62):DC(m-62) DG(n63):DC(m-63) DG(n64):DC(m-64) DA(n65):DT(m-65) DT(n66):DA(m-66) DT(n67):DA(m-67) DG(n68):DC(m-68) DT(n69):DA(m-69) DG(n70):DC(m-70) DA(n71):DT(m-71) DA(n72):DT(m-72) DA(n73):DT(m-73) DA(n74):DT(m-74) DA(n75):DT(m-75) DA(n76):DT(m-76) DA(n77):DT(m-77) DA(n78):DT(m-78) DA(n79):DT(m-79) DA(n80):DT(m-80) DG(n81):DC(m-81) DC(n82):DG(m-82) chaine ( 4) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainf ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaing ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainh ( 2) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaini ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainj ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaink ( 29) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainl ( 2) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkt/kRkrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kphRyRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kRKrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7xx6_p:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1.0 LINKER HISTONE ASSEMBLY (STICKY- 169A DNA FRAGMENT) organism=? DNA sequence DG(d-82):DC(c82) DC(d-81):DG(c81) DT(d-80):DA(c80) DT(d-79):DA(c79) DT(d-78):DA(c78) DT(d-77):DA(c77) DT(d-76):DA(c76) DT(d-75):DA(c75) DT(d-74):DA(c74) DT(d-73):DA(c73) DT(d-72):DA(c72) DT(d-71):DA(c71) DC(d-70):DG(c70) DA(d-69):DT(c69) DC(d-68):DG(c68) DA(d-67):DT(c67) DA(d-66):DT(c66) DT(d-65):DA(c65) DC(d-64):DG(c64) DC(d-63):DG(c63) DC(d-62):DG(c62) DG(d-61):DC(c61) DG(d-60):DC(c60) DT(d-59):DA(c59) DG(d-58):DC(c58) DC(d-57):DG(c57) DC(d-56):DG(c56) DG(d-55):DC(c55) DA(d-54):DT(c54) DG(d-53):DC(c53) DG(d-52):DC(c52) DC(d-51):DG(c51) DC(d-50):DG(c50) DG(d-49):DC(c49) DC(d-48):DG(c48) DT(d-47):DA(c47) DC(d-46):DG(c46) DA(d-45):DT(c45) DA(d-44):DT(c44) DT(d-43):DA(c43) DT(d-42):DA(c42) DG(d-41):DC(c41) DG(d-40):DC(c40) DT(d-39):DA(c39) DC(d-38):DG(c38) DG(d-37):DC(c37) DT(d-36):DA(c36) DA(d-35):DT(c35) DG(d-34):DC(c34) DA(d-33):DT(c33) DC(d-32):DG(c32) DA(d-31):DT(c31) DG(d-30):DC(c30) DC(d-29):DG(c29) DT(d-28):DA(c28) DC(d-27):DG(c27) DT(d-26):DA(c26) DA(d-25):DT(c25) DG(d-24):DC(c24) DC(d-23):DG(c23) DA(d-22):DT(c22) DC(d-21):DG(c21) DC(d-20):DG(c20) DG(d-19):DC(c19) DC(d-18):DG(c18) DT(d-17):DA(c17) DT(d-16):DA(c16) DA(d-15):DT(c15) DA(d-14):DT(c14) DA(d-13):DT(c13) DC(d-12):DG(c12) DG(d-11):DC(c11) DC(d-10):DG(c10) DA(d-9):DT(c9) DC(d-8):DG(c8) DG(d-7):DC(c7) DT(d-6):DA(c6) DA(d-5):DT(c5) DC(d-4):DG(c4) DG(d-3):DC(c3) DG(d-2):DC(c2) DA(d-1):DT(c1) DT(d0):DA(c0) DT(d1):DA(c-1) DC(d2):DG(c-2) DC(d3):DG(c-3) DG(d4):DC(c-4) DT(d5):DA(c-5) DA(d6):DT(c-6) DC(d7):DG(c-7) DG(d8):DC(c-8) DT(d9):DA(c-9) DG(d10):DC(c-10) DC(d11):DG(c-11) DG(d12):DC(c-12) DT(d13):DA(c-13) DT(d14):DA(c-14) DT(d15):DA(c-15) DA(d16):DT(c-16) DA(d17):DT(c-17) DG(d18):DC(c-18) DC(d19):DG(c-19) DG(d20):DC(c-20) DG(d21):DC(c-21) DT(d22):DA(c-22) DG(d23):DC(c-23) DC(d24):DG(c-24) DT(d25):DA(c-25) DA(d26):DT(c-26) DG(d27):DC(c-27) DA(d28):DT(c-28) DG(d29):DC(c-29) DC(d30):DG(c-30) DT(d31):DA(c-31) DG(d32):DC(c-32) DT(d33):DA(c-33) DC(d34):DG(c-34) DT(d35):DA(c-35) DA(d36):DT(c-36) DC(d37):DG(c-37) DG(d38):DC(c-38) DA(d39):DT(c-39) DC(d40):DG(c-40) DC(d41):DG(c-41) DA(d42):DT(c-42) DA(d43):DT(c-43) DT(d44):DA(c-44) DT(d45):DA(c-45) DG(d46):DC(c-46) DA(d47):DT(c-47) DG(d48):DC(c-48) DC(d49):DG(c-49) DG(d50):DC(c-50) DG(d51):DC(c-51) DC(d52):DG(c-52) DC(d53):DG(c-53) DT(d54):DA(c-54) DC(d55):DG(c-55) DG(d56):DC(c-56) DG(d57):DC(c-57) DC(d58):DG(c-58) DA(d59):DT(c-59) DC(d60):DG(c-60) DC(d61):DG(c-61) DG(d62):DC(c-62) DG(d63):DC(c-63) DG(d64):DC(c-64) DA(d65):DT(c-65) DT(d66):DA(c-66) DT(d67):DA(c-67) DG(d68):DC(c-68) DT(d69):DA(c-69) DG(d70):DC(c-70) DA(d71):DT(c-71) DA(d72):DT(c-72) DA(d73):DT(c-73) DA(d74):DT(c-74) DA(d75):DT(c-75) DA(d76):DT(c-76) DA(d77):DT(c-77) DA(d78):DT(c-78) DA(d79):DT(c-79) DA(d80):DT(c-80) DG(d81):DC(c-81) DC(d82):DG(c-82) chainp ( 43) GLN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hpkysdmivaaiqaeknragssrqsiqkyikshykvgenadsQiklsikrlvttgvlkqtkgvgasgsfrlaks >7xx7_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1X LINKER HISTONE ASSEMBLY (STICKY- 169A DNA FRAGMENT) organism=? DNA sequence DG(I-82):DC(J82) DC(I-81):DG(J81) DT(I-80):DA(J80) DT(I-79):DA(J79) DT(I-78):DA(J78) DT(I-77):DA(J77) DT(I-76):DA(J76) DT(I-75):DA(J75) DT(I-74):DA(J74) DT(I-73):DA(J73) DT(I-72):DA(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DC(I-68):DG(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DG(I68):DC(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DA(I72):DT(J-72) DA(I73):DT(J-73) DA(I74):DT(J-74) DA(I75):DT(J-75) DA(I76):DT(J-76) DA(I77):DT(J-77) DA(I78):DT(J-78) DA(I79):DT(J-79) DA(I80):DT(J-80) DG(I81):DC(J-81) DC(I82):DG(J-82) chainA ( 40) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 43) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 16) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) HIS18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 9) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) ALA17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) VAL18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) THR19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 39) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 44) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 14) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ARG29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence artkqtarkstggkaprkqlatkaarksapatggvkkphRyRPgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/grgkggkglgkggakRHrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/rgkqggkaRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkteshhkakgk/AVTkaqkkdgkkrkrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/artkqtarkstggkaprkqlatkaarksapatggvkkpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/grgkggkglgkggakrhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/sgrgkqggkaRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkteshhkakgk/paksapapkkgskKavtkaqkkdgkkRkrsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7xx7_KUV:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1X LINKER HISTONE ASSEMBLY (STICKY- 169A DNA FRAGMENT) organism=? DNA sequence DT(i335):DA(j169) DG(i336):DC(j168) DC(i337):DG(j167) DA(i338):DT(j166) DG(i339):DC(j165) DC(i340):DG(j164) DT(i341):DA(j163) DT(i342):DA(j162) DT(i343):DA(j161) DT(i344):DA(j160) DT(i345):DA(j159) DT(i346):DA(j158) DT(i347):DA(j157) DT(i348):DA(j156) DT(i349):DA(j155) DT(i350):DA(j154) DC(i351):DG(j153) DA(i352):DT(j152) DC(i353):DG(j151) DA(i354):DT(j150) DA(i355):DT(j149) DT(i356):DA(j148) DC(i357):DG(j147) DC(i358):DG(j146) DC(i359):DG(j145) DG(i360):DC(j144) DG(i361):DC(j143) DT(i362):DA(j142) DG(i363):DC(j141) DC(i364):DG(j140) DC(i365):DG(j139) DG(i366):DC(j138) DA(i367):DT(j137) DG(i368):DC(j136) DG(i369):DC(j135) DC(i370):DG(j134) DC(i371):DG(j133) DG(i372):DC(j132) DC(i373):DG(j131) DT(i374):DA(j130) DC(i375):DG(j129) DA(i376):DT(j128) DA(i377):DT(j127) DT(i378):DA(j126) DT(i379):DA(j125) DG(i380):DC(j124) DG(i381):DC(j123) DT(i382):DA(j122) DC(i383):DG(j121) DG(i384):DC(j120) DT(i385):DA(j119) DA(i386):DT(j118) DG(i387):DC(j117) DA(i388):DT(j116) DC(i389):DG(j115) DA(i390):DT(j114) DG(i391):DC(j113) DC(i392):DG(j112) DT(i393):DA(j111) DC(i394):DG(j110) DT(i395):DA(j109) DA(i396):DT(j108) DG(i397):DC(j107) DC(i398):DG(j106) DA(i399):DT(j105) DC(i400):DG(j104) DC(i401):DG(j103) DG(i402):DC(j102) DC(i403):DG(j101) DT(i404):DA(j100) DT(i405):DA(j99) DA(i406):DT(j98) DA(i407):DT(j97) DA(i408):DT(j96) DC(i409):DG(j95) DG(i410):DC(j94) DC(i411):DG(j93) DA(i412):DT(j92) DC(i413):DG(j91) DG(i414):DC(j90) DT(i415):DA(j89) DA(i416):DT(j88) DC(i417):DG(j87) DG(i418):DC(j86) DG(i419):DC(j85) DA(i420):DT(j84) DA(i421):DT(j83) DT(i422):DA(j82) DC(i423):DG(j81) DC(i424):DG(j80) DG(i425):DC(j79) DT(i426):DA(j78) DA(i427):DT(j77) DC(i428):DG(j76) DG(i429):DC(j75) DT(i430):DA(j74) DG(i431):DC(j73) DC(i432):DG(j72) DG(i433):DC(j71) DT(i434):DA(j70) DT(i435):DA(j69) DT(i436):DA(j68) DA(i437):DT(j67) DA(i438):DT(j66) DG(i439):DC(j65) DC(i440):DG(j64) DG(i441):DC(j63) DG(i442):DC(j62) DT(i443):DA(j61) DG(i444):DC(j60) DC(i445):DG(j59) DT(i446):DA(j58) DA(i447):DT(j57) DG(i448):DC(j56) DA(i449):DT(j55) DG(i450):DC(j54) DC(i451):DG(j53) DT(i452):DA(j52) DG(i453):DC(j51) DT(i454):DA(j50) DC(i455):DG(j49) DT(i456):DA(j48) DA(i457):DT(j47) DC(i458):DG(j46) DG(i459):DC(j45) DA(i460):DT(j44) DC(i461):DG(j43) DC(i462):DG(j42) DA(i463):DT(j41) DA(i464):DT(j40) DT(i465):DA(j39) DT(i466):DA(j38) DG(i467):DC(j37) DA(i468):DT(j36) DG(i469):DC(j35) DC(i470):DG(j34) DG(i471):DC(j33) DG(i472):DC(j32) DC(i473):DG(j31) DC(i474):DG(j30) DT(i475):DA(j29) DC(i476):DG(j28) DG(i477):DC(j27) DG(i478):DC(j26) DC(i479):DG(j25) DA(i480):DT(j24) DC(i481):DG(j23) DC(i482):DG(j22) DG(i483):DC(j21) DG(i484):DC(j20) DG(i485):DC(j19) DA(i486):DT(j18) DT(i487):DA(j17) DT(i488):DA(j16) DG(i489):DC(j15) DT(i490):DA(j14) DG(i491):DC(j13) DA(i492):DT(j12) DA(i493):DT(j11) DA(i494):DT(j10) DA(i495):DT(j9) DA(i496):DT(j8) DA(i497):DT(j7) DA(i498):DT(j6) DA(i499):DT(j5) DA(i500):DT(j4) DA(i501):DT(j3) DG(i502):DC(j2) DC(i503):DG(j1) chainK ( 22) THR22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 40) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU chainV ( 5) LEU5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence artkqtarkstggkaprkqlaTkaarksapatggvkkphRyRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/msveleealpvttaegmakkvTkaggsaalspskkrknsKkKnqpgkysqlvvetirrlgerngsslakiyteakkvpwfdqQngrtylkysikalvqndtllqvkgtgangsfklnrkklegggerrgapaaatapaptahkakkaapgaagsrradkkpargqkpeqrshkkgagakkdkggkakktaaaggkkvkkaakpsvpkvpkgrk/msveLeealpvttaegmakkvtkaggsaalspskkrknskkknqpgkysqlvvetirrlgerngsslakiyteakkvpwfdqqngrtylkysikalvqndtllqvkgtgangsfklnrkklegggerrgapaaatapaptahkakkaapgaagsrradkkpargqkpeqrshkkgagakkdkggkakktaaaggkkvkkaakpsvpkvpkgrk >7xx7_LMNOPQR:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF NUCLEOSOME-H1X LINKER HISTONE ASSEMBLY (STICKY- 169A DNA FRAGMENT) organism=? DNA sequence DG(T-82):DC(S82) DC(T-81):DG(S81) DT(T-80):DA(S80) DT(T-79):DA(S79) DT(T-78):DA(S78) DT(T-77):DA(S77) DT(T-76):DA(S76) DT(T-75):DA(S75) DT(T-74):DA(S74) DT(T-73):DA(S73) DT(T-72):DA(S72) DT(T-71):DA(S71) DC(T-70):DG(S70) DA(T-69):DT(S69) DC(T-68):DG(S68) DA(T-67):DT(S67) DA(T-66):DT(S66) DT(T-65):DA(S65) DC(T-64):DG(S64) DC(T-63):DG(S63) DC(T-62):DG(S62) DG(T-61):DC(S61) DG(T-60):DC(S60) DT(T-59):DA(S59) DG(T-58):DC(S58) DC(T-57):DG(S57) DC(T-56):DG(S56) DG(T-55):DC(S55) DA(T-54):DT(S54) DG(T-53):DC(S53) DG(T-52):DC(S52) DC(T-51):DG(S51) DC(T-50):DG(S50) DG(T-49):DC(S49) DC(T-48):DG(S48) DT(T-47):DA(S47) DC(T-46):DG(S46) DA(T-45):DT(S45) DA(T-44):DT(S44) DT(T-43):DA(S43) DT(T-42):DA(S42) DG(T-41):DC(S41) DG(T-40):DC(S40) DT(T-39):DA(S39) DC(T-38):DG(S38) DG(T-37):DC(S37) DT(T-36):DA(S36) DA(T-35):DT(S35) DG(T-34):DC(S34) DA(T-33):DT(S33) DC(T-32):DG(S32) DA(T-31):DT(S31) DG(T-30):DC(S30) DC(T-29):DG(S29) DT(T-28):DA(S28) DC(T-27):DG(S27) DT(T-26):DA(S26) DA(T-25):DT(S25) DG(T-24):DC(S24) DC(T-23):DG(S23) DA(T-22):DT(S22) DC(T-21):DG(S21) DC(T-20):DG(S20) DG(T-19):DC(S19) DC(T-18):DG(S18) DT(T-17):DA(S17) DT(T-16):DA(S16) DA(T-15):DT(S15) DA(T-14):DT(S14) DA(T-13):DT(S13) DC(T-12):DG(S12) DG(T-11):DC(S11) DC(T-10):DG(S10) DA(T-9):DT(S9) DC(T-8):DG(S8) DG(T-7):DC(S7) DT(T-6):DA(S6) DA(T-5):DT(S5) DC(T-4):DG(S4) DG(T-3):DC(S3) DG(T-2):DC(S2) DA(T-1):DT(S1) DT(T0):DA(S0) DT(T1):DA(S-1) DC(T2):DG(S-2) DC(T3):DG(S-3) DG(T4):DC(S-4) DT(T5):DA(S-5) DA(T6):DT(S-6) DC(T7):DG(S-7) DG(T8):DC(S-8) DT(T9):DA(S-9) DG(T10):DC(S-10) DC(T11):DG(S-11) DG(T12):DC(S-12) DT(T13):DA(S-13) DT(T14):DA(S-14) DT(T15):DA(S-15) DA(T16):DT(S-16) DA(T17):DT(S-17) DG(T18):DC(S-18) DC(T19):DG(S-19) DG(T20):DC(S-20) DG(T21):DC(S-21) DT(T22):DA(S-22) DG(T23):DC(S-23) DC(T24):DG(S-24) DT(T25):DA(S-25) DA(T26):DT(S-26) DG(T27):DC(S-27) DA(T28):DT(S-28) DG(T29):DC(S-29) DC(T30):DG(S-30) DT(T31):DA(S-31) DG(T32):DC(S-32) DT(T33):DA(S-33) DC(T34):DG(S-34) DT(T35):DA(S-35) DA(T36):DT(S-36) DC(T37):DG(S-37) DG(T38):DC(S-38) DA(T39):DT(S-39) DC(T40):DG(S-40) DC(T41):DG(S-41) DA(T42):DT(S-42) DA(T43):DT(S-43) DT(T44):DA(S-44) DT(T45):DA(S-45) DG(T46):DC(S-46) DA(T47):DT(S-47) DG(T48):DC(S-48) DC(T49):DG(S-49) DG(T50):DC(S-50) DG(T51):DC(S-51) DC(T52):DG(S-52) DC(T53):DG(S-53) DT(T54):DA(S-54) DC(T55):DG(S-55) DG(T56):DC(S-56) DG(T57):DC(S-57) DC(T58):DG(S-58) DA(T59):DT(S-59) DC(T60):DG(S-60) DC(T61):DG(S-61) DG(T62):DC(S-62) DG(T63):DC(S-63) DG(T64):DC(S-64) DA(T65):DT(S-65) DT(T66):DA(S-66) DT(T67):DA(S-67) DG(T68):DC(S-68) DT(T69):DA(S-69) DG(T70):DC(S-70) DA(T71):DT(S-71) DA(T72):DT(S-72) DA(T73):DT(S-73) DA(T74):DT(S-74) DA(T75):DT(S-75) DA(T76):DT(S-76) DA(T77):DT(S-77) DA(T78):DT(S-78) DA(T79):DT(S-79) DA(T80):DT(S-80) DG(T81):DC(S-81) DC(T82):DG(S-82) chainL chainM ( 11) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 2) LYS20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) GLN22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 40) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP chainQ ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) SER122 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR ( 30) LYS30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgrgkggkglgkggakrhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/sgrgkqggkaRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkteshhkakgk/tKaQkkdgkkrkrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/artkqtarkstggkaprkqlatkaarksapatggvkkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/sgrgkggkglgkggakrhrkvlrdniqgitkpairrlarRggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/sgrgkqggkarakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkteShhkakgk/pepaksapapkkgskkavtkaqkkdgkkrKrsrkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7xya_CDFG: title=THE CRYO-EM STRUCTURE OF AN ALPA-LOADING COMPLEX organism=? DNA sequence DC(N3):DG(T59) DT(N4):DA(T58) DA(N5):DT(T57) DT(N6):DA(T56) DG(N7):DC(T55) DG(N8):DC(T54) DG(N9):DC(T53) DA(N10):DT(T52) DC(N11):DG(T51) DG(N12):DC(T50) DA(N13):DT(T49) DT(N14):DA(T48) DA(N15):DT(T47) DA(N16):DT(T46) DA(N17):DT(T45) DG(N18):DC(T44) DG(N19):DC(T43) DT(N20):DA(T42) DA(N21):DT(T41) DT(N22):DA(T40) DA(N23):DT(T39) DA(N24):DT(T38) DA(N25):DT(T37) DT(N26):DA(T36) DT(N27):DA(T35) DC(N28):DG(T34) DT(N29):DA(T33) DC(N30):DG(T32) DT(N31):DA(T31) DA(N32):DA(T30) DT(N33):DT(T29) DA(N34):DA(T28) DA(N35):DA(T27) DT(N36):DT(T26) DG(N37):DG(T25) DG(N38):DG(T24) DG(N39):DG(T23) DA(N40):DA(T22) DG(N41):DG(T21) DC(N42):DC(T20) DT(N43):DT(T19) DG(N44):DG(T18) DC(N45):DG(T17) DT(N46):DA(T16) DC(N47):DG(T15) DT(N48):DA(T14) DG(N49):DC(T13) DG(N50):DC(T12) DC(N51):DG(T11) DC(N52):DG(T10) DG(N53):DC(T9) DA(N54):DT(T8) DA(N55):DT(T7) DG(N56):DC(T6) DC(N57):DG(T5) DC(N58):DG(T4) DC(N59):DG(T3) DG(N60):DC(T2) chainC (153) ARG155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ILE181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) TRP187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ARG204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (268) GLU379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) ILE450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (432) LEU543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (436) ARG547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) GLU551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (441) VAL552 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 4) ASP98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) VAL100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) MET104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLU118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) LEU390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (274) PHE423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) GLU424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) SER432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) THR433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TYR434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) THR436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TRP437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) TRP438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) GLN441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ARG445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) ALA451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (125) LYS138 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) SER139 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfsklpdvmdvpyllaiqldsyreflqagatkeqfrdvglhaafksvfpiisysgnaaleyvgyrlgepafdvkecvlrgvtfavplrvkvrliifdressnkaikdikeqevymgeiplmtengtfiingtervivsqlhRspgvffdhdrgkthssgkllysaRiIpyrgsWldfefdpkdcvfvriDRrrklpasvllralgysteeilnafyatlytndidcgpfisdtlkidntsnqlealveiyrmmrpgEpptkeaaetlfgnlffsaerydlsavgrmkfnrrigrteiegpgvlskediidvlktlvdirngkgivddIdhlgnrrvrcvgemaenqfrvglvrveravkerlsmaeseglmpqdlinakpvaaaikeffgssqlsqfmdqnnplseithkrrvsalgpggLtreRagfEVrdvhpthygrvcpietpegpniglinslatyartnkygflespyrvvkdslvtdeivflsaieeadhviaqasatlnekgqlvdelvavrhlneftvkapedvtlmdvspkqvvsvaaslipflehddanralmgsnmqrqavptlradkplvgtgmernvardsgvcvvarrggvidsvdasrvvvrvaddevetgeagvdiynltkytrsnqntcinqrplvskgdvvargdiladgpstdmgelalgqnmrvafmpwngfnfedsiclservvqedrfttihiqeltcvardtklgpeeitadipnvgeaalnkldeagivyvgaevqagdilvgkvtpvkdtslrvptgtkgtvidvqvftrdgverdsralsiekmqldqirkdlneefrivegatferlraalvgaaddalneqlekaqayisdrrqllddkfedkkrklqqgddlapgvlkivkvylaikrriqpgdkmagrhgnkgvvsvimpvedmphdangtpvdivlnplgvpsrmnvgqilethlglaakglgekinrmleeqrkvaelrkflheiyneiggreenldelgdneilalaknlrggvpmatpvfdgakereikamlkladlpesgqmrlfdgrtgnqferpttvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgdhrmeagmpesfnvlikeirslgidielet/efdairiglaspemirswsfgevkkpetinyrtfkperdglfcakifgpvkdyeclcgkykrlkhrgvicekcgvevalakvrrermghielaspvahiwflkslpsrigllldmtlrdiervlyfesyvvidpgmttlekgqllndeqyfealeefgddfdarmgaeavhellnaidleheigrlreeipqtnsetkikklskrlklmeafqgsgnkpewmvltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgptlrlhqcglpkkmalelfkpfifgklegrgmattikaakkmverelpevwdvlaevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvmglyymtreainakgegmafadlqevdrayrsgqaslharvkvrinekikgedgqltantrivdttvgrallfqvvpaglpfdvvnqsmkkkaisklinhcyrvvglkdtvifadqlmytgfaystisgvsigvndfvipdekariinaatdevkeiesqyasglvtqgekynkvidlwskandevskammanlskekvvdregkevdqesfnsmymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteidcgtehgllmsphieggdvveplgervlgrviardvfkpgsdevivpagtlidekwvdflevmsvdevvvrspitcetrhgicamcygrdlarghrvnigeavgviaaqsigepgtqltadnvqvknggtirlhnlkhvvradgalvavsrsgelavaddfgrereryklpygavisvkegdkvdpgaivakwdphthpivtevdgtvafvgmeegitvkrqtdeltgltnievmdpkdrpaagkdirpavklidaagkdlllpgtdvpaqyflpanalvnltdgakvsigdvvaripqtgglprvadlfearrpkepsilaeisgtisfgketkgkrrlvitpndgsdpyeelipkwrhlnvfegeqvnrgevisdgpsnphdilrllgvsslakyivneiqdvyrlqgvkindkhietilrqmlrkvevsesgdssfikgdqveltqvleeneqlgtedkfpakyervllgitkaslstesfisaasfqettrvlteaavtgkrdflrglkenvvvgrlipagtglayhserkrqrdlg/rttDpVRmyMremgtveLltregEieiakrieegirevmsaiaqfpgtvdsiladynrivaeggrlsdvlsgyidpeearlrftavseqldkakkalkqataeltglaelfmpiklvpkqfdalvarvrsalegvraqeraimqlcvrdarmpradflrlfpnhetdekwvdsvlkskpkyaeaierlrddilrnqqklaaleseveltvaeikeinramsigeakarrakkemveanlRLvisiakkytnrglqfldliqegniglmkavdkFEyrRgykfSTYaTWWiRQaitRsiadqA/steqalavaywmfeqqpgprsstamvidslrersglsphewqaqavmtvrfaqrqlaahplelavvraefargrdfvlglaalrdwlkpaagpieqraalallmrmfrrppssireierlsglsKStlhrwdkewrervaallrqallrleepmaqvg >7xya_F:Sigma2_domain_of_RNA_polymerase_sigma_factors; title=THE CRYO-EM STRUCTURE OF AN ALPA-LOADING COMPLEX organism=? DNA sequence DC(N3):DG(T59) DT(N4):DA(T58) DA(N5):DT(T57) DT(N6):DA(T56) DG(N7):DC(T55) DG(N8):DC(T54) DG(N9):DC(T53) DA(N10):DT(T52) DC(N11):DG(T51) DG(N12):DC(T50) DA(N13):DT(T49) DT(N14):DA(T48) DA(N15):DT(T47) DA(N16):DT(T46) DA(N17):DT(T45) DG(N18):DC(T44) DG(N19):DC(T43) DT(N20):DA(T42) DA(N21):DT(T41) DT(N22):DA(T40) DA(N23):DT(T39) DA(N24):DT(T38) DA(N25):DT(T37) DT(N26):DA(T36) DT(N27):DA(T35) DC(N28):DG(T34) DT(N29):DA(T33) DC(N30):DG(T32) DT(N31):DA(T31) DA(N32):DA(T30) DT(N33):DT(T29) DA(N34):DA(T28) DA(N35):DA(T27) DT(N36):DT(T26) DG(N37):DG(T25) DG(N38):DG(T24) DG(N39):DG(T23) DA(N40):DA(T22) DG(N41):DG(T21) DC(N42):DC(T20) DT(N43):DT(T19) DG(N44):DG(T18) DC(N45):DG(T17) DT(N46):DA(T16) DC(N47):DG(T15) DT(N48):DA(T14) DG(N49):DC(T13) DG(N50):DC(T12) DC(N51):DG(T11) DC(N52):DG(T10) DG(N53):DC(T9) DA(N54):DT(T8) DA(N55):DT(T7) DG(N56):DC(T6) DC(N57):DG(T5) DC(N58):DG(T4) DC(N59):DG(T3) DG(N60):DC(T2) chainF ( 4) ASP98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) VAL100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) MET104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) GLU118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) LEU390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (274) PHE423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) GLU424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) ARG427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) SER432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) THR433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (285) TYR434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) THR436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) TRP437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) TRP438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) ARG440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) GLN441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ARG445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) ALA451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rttDpVRmyMremgtveLltregEieiakrieegirevmsaiaqfpgtvdsiladynrivaeggrlsdvlsgyidpeearlrftavseqldkakkalkqataeltglaelfmpiklvpkqfdalvarvrsalegvraqeraimqlcvrdarmpradflrlfpnhetdekwvdsvlkskpkyaeaierlrddilrnqqklaaleseveltvaeikeinramsigeakarrakkemveanlRLvisiakkytnrglqfldliqegniglmkavdkFEyrRgykfSTYaTWWiRQaitRsiadqA >7xyb_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THE CRYO-EM STRUCTURE OF AN ALPA-LOADED COMPLEX organism=? DNA sequence DG(N96):DC(T25) DT(N97):DA(T24) DG(N98):DC(T23) DG(N99):DC(T22) DT(N100):DT(T21) DG(N101):DC(T20) DG(N102):DT(T19) DA(N103):DC(T18) DG(N107):DC(T17) DT(N108):DA(T16) DA(N109):DT(T15) DC(N110):DG(T14) DC(N111):DG(T13) DT(N112):DA(T12) DC(N113):DG(T11) DG(N114):DC(T10) DT(N115):DA(T9) DT(N116):DA(T8) DG(N117):DC(T7) DT(N118):DA(T6) DG(N119):DC(T5) DG(N120):DC(T4) DT(N121):DA(T3) DA(N122):DT(T2) chainC (153) ARG155 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (177) ARG179 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) SER186 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (201) ASP203 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ARG204 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (436) ARG547 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfsklpdvmdvpyllaiqldsyreflqagatkeqfrdvglhaafksvfpiisysgnaaleyvgyrlgepafdvkecvlrgvtfavplrvkvrliifdressnkaikdikeqevymgeiplmtengtfiingtervivsqlhRspgvffdhdrgkthssgkllysaRiipyrgSwldfefdpkdcvfvriDRrrklpasvllralgysteeilnafyatlytndidcgpfisdtlkidntsnqlealveiyrmmrpgepptkeaaetlfgnlffsaerydlsavgrmkfnrrigrteiegpgvlskediidvlktlvdirngkgivddidhlgnrrvrcvgemaenqfrvglvrveravkerlsmaeseglmpqdlinakpvaaaikeffgssqlsqfmdqnnplseithkrrvsalgpggltreRagfevrdvhpthygrvcpietpegpniglinslatyartnkygflespyrvvkdslvtdeivflsaieeadhviaqasatlnekgqlvdelvavrhlneftvkapedvtlmdvspkqvvsvaaslipflehddanralmgsnmqrqavptlradkplvgtgmernvardsgvcvvarrggvidsvdasrvvvrvaddevetgeagvdiynltkytrsnqntcinqrplvskgdvvargdiladgpstdmgelalgqnmrvafmpwngfnfedsiclservvqedrfttihiqeltcvardtklgpeeitadipnvgeaalnkldeagivyvgaevqagdilvgkvtpvkdtslrvptgtkgtvidvqvftrdgverdsralsiekmqldqirkdlneefrivegatferlraalvgaaddalneqlekaqayisdrrqllddkfedkkrklqqgddlapgvlkivkvylaikrriqpgdkmagrhgnkgvvsvimpvedmphdangtpvdivlnplgvpsrmnvgqilethlglaakglgekinrmleeqrkvaelrkflheiyneiggreenldelgdneilalaknlrggvpmatpvfdgakereikamlkladlpesgqmrlfdgrtgnqferpttvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgdhrmeagmpesfnvlikeirslgidielet >7xyb_CD: title=THE CRYO-EM STRUCTURE OF AN ALPA-LOADED COMPLEX organism=? DNA sequence DT(T2):DA(N122) DA(T3):DT(N121) DC(T4):DG(N120) DC(T5):DG(N119) DA(T6):DT(N118) DC(T7):DG(N117) DA(T8):DT(N116) DA(T9):DT(N115) DC(T10):DG(N114) DG(T11):DC(N113) DA(T12):DT(N112) DG(T13):DC(N111) DG(T14):DC(N110) DT(T15):DA(N109) DA(T16):DT(N108) DC(T17):DG(N107) DC(T18):DA(N103) DT(T19):DG(N102) DC(T20):DG(N101) DT(T21):DT(N100) DC(T22):DG(N99) DC(T23):DG(N98) DA(T24):DT(N97) DC(T25):DG(N96) chainC (153) ARG155 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (177) ARG179 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (184) SER186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (201) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (202) ARG204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (436) ARG547 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 chainD (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 3 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfsklpdvmdvpyllaiqldsyreflqagatkeqfrdvglhaafksvfpiisysgnaaleyvgyrlgepafdvkecvlrgvtfavplrvkvrliifdressnkaikdikeqevymgeiplmtengtfiingtervivsqlhRspgvffdhdrgkthssgkllysaRiipyrgSwldfefdpkdcvfvriDRrrklpasvllralgysteeilnafyatlytndidcgpfisdtlkidntsnqlealveiyrmmrpgepptkeaaetlfgnlffsaerydlsavgrmkfnrrigrteiegpgvlskediidvlktlvdirngkgivddidhlgnrrvrcvgemaenqfrvglvrveravkerlsmaeseglmpqdlinakpvaaaikeffgssqlsqfmdqnnplseithkrrvsalgpggltreRagfevrdvhpthygrvcpietpegpniglinslatyartnkygflespyrvvkdslvtdeivflsaieeadhviaqasatlnekgqlvdelvavrhlneftvkapedvtlmdvspkqvvsvaaslipflehddanralmgsnmqrqavptlradkplvgtgmernvardsgvcvvarrggvidsvdasrvvvrvaddevetgeagvdiynltkytrsnqntcinqrplvskgdvvargdiladgpstdmgelalgqnmrvafmpwngfnfedsiclservvqedrfttihiqeltcvardtklgpeeitadipnvgeaalnkldeagivyvgaevqagdilvgkvtpvkdtslrvptgtkgtvidvqvftrdgverdsralsiekmqldqirkdlneefrivegatferlraalvgaaddalneqlekaqayisdrrqllddkfedkkrklqqgddlapgvlkivkvylaikrriqpgdkmagrhgnkgvvsvimpvedmphdangtpvdivlnplgvpsrmnvgqilethlglaakglgekinrmleeqrkvaelrkflheiyneiggreenldelgdneilalaknlrggvpmatpvfdgakereikamlkladlpesgqmrlfdgrtgnqferpttvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgdhrmeagmpesfnvlikeirslgidielet/efdairiglaspemirswsfgevkkpetinyrtfkperdglfcakifgpvkdyeclcgkykrlkhrgvicekcgvevalakvrrermghielaspvahiwflkslpsrigllldmtlrdiervlyfesyvvidpgmttlekgqllndeqyfealeefgddfdarmgaeavhellnaidleheigrlreeipqtnsetkikklskrlklmeafqgsgnkpewmvltvlpvlppdlrplvpldggrfatsdlndlyRRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgptlrlhqcglpkkmalelfkpfifgklegrgmattikaakkmverelpevwdvlaevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvmglyymtreainakgegmafadlqevdrayrsgqaslharvkvrinekikgedgqltantrivdttvgrallfqvvpaglpfdvvnqsmkkkaisklinhcyrvvglkdtvifadqlmytgfaystisgvsigvndfvipdekariinaatdevkeiesqyasglvtqgekynkvidlwskandevskammanlskekvvdregkevdqesfnsmymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteidcgtehgllmsphieggdvveplgervlgrviardvfkpgsdevivpagtlidekwvdflevmsvdevvvrspitcetrhgicamcygrdlarghrvnigeavgviaaqsigepgtqltadnvqvknggtirlhnlkhvvradgalvavsrsgelavaddfgrereryklpygavisvkegdkvdpgaivakwdphthpivtevdgtvafvgmeegitvkrqtdeltgltnievmdpkdrpaagkdirpavklidaagkdlllpgtdvpaqyflpanalvnltdgakvsigdvvaripqtgglprvadlfearrpkepsilaeisgtisfgketkgkrrlvitpndgsdpyeelipkwrhlnvfegeqvnrgevisdgpsnphdilrllgvsslakyivneiqdvyrlqgvkindkhietilrqmlrkvevsesgdssfikgdqveltqvleeneqlgtedkfpakyervllgitkaslstesfisaasfqettrvlteaavtgkrdflrglkenvvvgrlipagtglayhserkrqrdlg >7xyf_E:Histone-fold; title=CRYO-EM STRUCTURE OF FFT3-NUCLEOSOME COMPLEX WITH FFT3 BOUND TO SHL+2 POSITION OF THE NUCLEOSOME organism=? DNA sequence DG(I2):DC(J145) DG(I3):DC(J144) DA(I4):DT(J143) DG(I5):DC(J142) DA(I6):DT(J141) DA(I7):DT(J140) DT(I8):DA(J139) DC(I9):DG(J138) DC(I10):DG(J137) DC(I11):DG(J136) DG(I12):DC(J135) DG(I13):DC(J134) DT(I14):DA(J133) DG(I15):DC(J132) DC(I16):DG(J131) DC(I17):DG(J130) DG(I18):DC(J129) DA(I19):DT(J128) DG(I20):DC(J127) DG(I21):DC(J126) DC(I22):DG(J125) DC(I23):DG(J124) DG(I24):DC(J123) DC(I25):DG(J122) DT(I26):DA(J121) DC(I27):DG(J120) DA(I28):DT(J119) DA(I29):DT(J118) DT(I30):DA(J117) DT(I31):DA(J116) DG(I32):DC(J115) DG(I33):DC(J114) DT(I34):DA(J113) DC(I35):DG(J112) DG(I36):DC(J111) DT(I37):DA(J110) DA(I38):DT(J109) DG(I39):DC(J108) DA(I40):DT(J107) DC(I41):DG(J106) DA(I42):DT(J105) DG(I43):DC(J104) DC(I44):DG(J103) DT(I45):DA(J102) DC(I46):DG(J101) DT(I47):DA(J100) DA(I48):DT(J99) DG(I49):DC(J98) DC(I50):DG(J97) DA(I51):DT(J96) DC(I52):DG(J95) DC(I53):DG(J94) DG(I54):DC(J93) DC(I55):DG(J92) DT(I56):DA(J91) DT(I57):DA(J90) DA(I58):DT(J89) DA(I59):DT(J88) DA(I60):DT(J87) DC(I61):DG(J86) DG(I62):DC(J85) DC(I63):DG(J84) DA(I64):DT(J83) DC(I65):DG(J82) DG(I66):DC(J81) DT(I67):DA(J80) DA(I68):DT(J79) DC(I69):DG(J78) DG(I70):DC(J77) DC(I71):DG(J76) DG(I72):DC(J75) DC(I73):DG(J74) DT(I74):DA(J73) DT(I76):DC(J72) DC(I77):DG(J70) DC(I78):DG(J69) DC(I79):DG(J68) DC(I80):DG(J67) DC(I81):DG(J66) DG(I82):DC(J65) DC(I83):DG(J64) DG(I84):DC(J63) DT(I85):DA(J62) DT(I86):DA(J61) DT(I87):DA(J60) DT(I88):DA(J59) DA(I89):DT(J58) DA(I90):DT(J57) DC(I91):DG(J56) DC(I92):DG(J55) DG(I93):DC(J54) DC(I94):DG(J53) DC(I95):DG(J52) DA(I96):DT(J51) DA(I97):DT(J50) DG(I98):DC(J49) DG(I99):DC(J48) DG(I100):DC(J47) DG(I101):DC(J46) DA(I102):DT(J45) DT(I103):DA(J44) DT(I104):DA(J43) DA(I105):DT(J42) DC(I106):DG(J41) DT(I107):DA(J40) DC(I108):DG(J39) DC(I109):DG(J38) DC(I110):DG(J37) DT(I111):DA(J36) DA(I112):DT(J35) DG(I113):DC(J34) DT(I114):DA(J33) DC(I115):DG(J32) DT(I116):DA(J31) DC(I117):DG(J30) DC(I118):DG(J29) DA(I119):DT(J28) DG(I120):DC(J27) DG(I121):DC(J26) DC(I122):DG(J25) DA(I123):DT(J24) DC(I124):DG(J23) DG(I125):DC(J22) DT(I126):DA(J21) DG(I127):DC(J20) DT(I128):DA(J19) DC(I129):DG(J18) DA(I130):DT(J17) DG(I131):DC(J16) DA(I132):DT(J15) DT(I133):DA(J14) DA(I134):DT(J13) DT(I135):DA(J12) DA(I136):DT(J11) DT(I137):DA(J10) DA(I138):DT(J9) DC(I139):DG(J8) DA(I140):DT(J7) DT(I141):DA(J6) DC(I142):DG(J5) DC(I143):DG(J4) DT(I144):DA(J3) DG(I145):DC(J2) DT(I146):DA(J1) chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera >7xyg_K:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF FFT3-NUCLEOSOME COMPLEX WITH FFT3 BOUND TO SHL+3 POSITION OF THE NUCLEOSOME organism=? DNA sequence DC(J2):DG(I145) DA(J3):DT(I144) DG(J4):DC(I143) DG(J5):DC(I142) DA(J6):DT(I141) DT(J7):DA(I140) DG(J8):DC(I139) DT(J9):DA(I138) DA(J10):DT(I137) DT(J11):DA(I136) DA(J12):DT(I135) DT(J13):DA(I134) DA(J14):DT(I133) DT(J15):DA(I132) DC(J16):DG(I131) DT(J17):DA(I130) DG(J18):DC(I129) DC(J20):DT(I128) DA(J21):DT(I126) DC(J22):DG(I125) DG(J23):DC(I124) DT(J24):DA(I123) DG(J25):DC(I122) DC(J26):DG(I121) DC(J27):DG(I120) DT(J28):DA(I119) DG(J29):DC(I118) DG(J30):DC(I117) DA(J31):DT(I116) DG(J32):DC(I115) DA(J33):DT(I114) DC(J34):DG(I113) DT(J35):DA(I112) DA(J36):DT(I111) DG(J37):DC(I110) DG(J38):DC(I109) DG(J39):DC(I108) DA(J40):DT(I107) DG(J41):DC(I106) DT(J42):DA(I105) DA(J43):DT(I104) DA(J44):DT(I103) DT(J45):DA(I102) DC(J46):DG(I101) DC(J47):DG(I100) DC(J48):DG(I99) DC(J49):DG(I98) DT(J50):DA(I97) DT(J51):DA(I96) DG(J52):DC(I95) DG(J53):DC(I94) DC(J54):DG(I93) DG(J55):DC(I92) DG(J56):DC(I91) DT(J57):DA(I90) DT(J58):DA(I89) DA(J59):DT(I88) DA(J60):DT(I87) DA(J61):DT(I86) DA(J62):DT(I85) DC(J63):DG(I84) DG(J64):DC(I83) DC(J65):DG(I82) DG(J66):DC(I81) DG(J67):DC(I80) DG(J68):DC(I79) DG(J69):DC(I78) DG(J70):DC(I77) DA(J71):DT(I76) DC(J72):DG(I75) DG(J74):DT(I74) DC(J75):DG(I72) DG(J76):DC(I71) DC(J77):DG(I70) DG(J78):DC(I69) DT(J79):DA(I68) DA(J80):DT(I67) DC(J81):DG(I66) DG(J82):DC(I65) DT(J83):DA(I64) DG(J84):DC(I63) DC(J85):DG(I62) DG(J86):DC(I61) DT(J88):DA(I60) DT(J89):DA(I58) DA(J91):DT(I57) DG(J92):DC(I55) DC(J93):DG(I54) DG(J94):DC(I53) DG(J95):DC(I52) DT(J96):DA(I51) DG(J97):DC(I50) DC(J98):DG(I49) DT(J99):DA(I48) DA(J100):DT(I47) DG(J101):DC(I46) DA(J102):DT(I45) DG(J103):DC(I44) DC(J104):DG(I43) DT(J105):DA(I42) DG(J106):DC(I41) DT(J107):DA(I40) DC(J108):DG(I39) DT(J109):DA(I38) DA(J110):DT(I37) DC(J111):DG(I36) DG(J112):DC(I35) DA(J113):DT(I34) DC(J114):DG(I33) DC(J115):DG(I32) DA(J117):DT(I31) DT(J118):DA(I29) DT(J119):DA(I28) DG(J120):DC(I27) DA(J121):DT(I26) DG(J122):DC(I25) DC(J123):DG(I24) DG(J124):DC(I23) DG(J125):DC(I22) DC(J126):DG(I21) DC(J127):DG(I20) DT(J128):DA(I19) DC(J129):DG(I18) DG(J130):DC(I17) DG(J131):DC(I16) DC(J132):DG(I15) DA(J133):DT(I14) DC(J134):DG(I13) DC(J135):DG(I12) DG(J136):DC(I11) DG(J137):DC(I10) DG(J138):DC(I9) DA(J139):DT(I8) DT(J140):DA(I7) DT(J141):DA(I6) DC(J142):DG(I5) DT(J143):DA(I4) DC(J144):DG(I3) DC(J145):DG(I2) chainK (253) ARG495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence idtaalkeevlkymnrcstqdladmtgctlaeaefvakrpfpdlesalvvkqprpvipktplgprlvgicmeimrgyfvvdalirqceqlggkiqrgieawglsntatsdegetslvnfdqksfgtpanssfittppasfspdiklqdyqiiginwlyllyelklagilademglgktcqtiaffsllmdkningphlviapastmenwlrefakfcpklkielyygsqvereeirerinsnkdsynvlttyRlaatskadrlflrnqkfnvcvydeghylknraseryrhlmsipadfrvlltgtplqnnlkelisllafilphvfdyglksldviftmkkspesdferallseqrvsrakapfvlrrkksqvlktriiefcefseeerrryddfaskqsvnsllvmktnldtnanlakkkstagfvlvqlrkladhpmlfrihykddilrqmakaimnepqykkanelyifedmqymsdielhnlcckfpsinsfqlkdepwmdatkvrklkklltnavengdrvvlfsqftqvldilqlvmkslnlkflrfdgstqvdfrqdlidqfyadesinvfllstkaggfginlacanmvilydvsfnpfddlqaedrahrvgqkkevtvykfvvkdtieehiqrlanakia >7xzx_N:p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME IN COMPLEX WITH P53 DNA-BINDING DOMAIN organism=? DNA sequence DC(I9):DG(J185) DT(I10):DA(J184) DA(I11):DT(J183) DT(I12):DA(J182) DC(I13):DG(J181) DG(I14):DC(J180) DC(I15):DG(J179) DG(I16):DC(J178) DA(I17):DT(J177) DG(I18):DC(J176) DC(I19):DG(J175) DC(I20):DG(J174) DA(I21):DT(J173) DG(I22):DC(J172) DG(I23):DC(J171) DC(I24):DG(J170) DC(I25):DG(J169) DT(I26):DA(J168) DG(I27):DC(J167) DA(I28):DT(J166) DG(I29):DC(J165) DA(I30):DT(J164) DA(I31):DT(J163) DT(I32):DA(J162) DC(I33):DG(J161) DC(I34):DG(J160) DG(I35):DC(J159) DG(I36):DC(J158) DT(I37):DA(J157) DG(I38):DC(J156) DC(I39):DG(J155) DC(I40):DG(J154) DG(I41):DC(J153) DA(I42):DT(J152) DG(I43):DC(J151) DG(I44):DC(J150) DC(I45):DG(J149) DC(I46):DG(J148) DG(I47):DC(J147) DC(I48):DG(J146) DT(I49):DA(J145) DC(I50):DG(J144) DA(I51):DT(J143) DA(I52):DT(J142) DT(I53):DA(J141) DT(I54):DA(J140) DG(I55):DC(J139) DG(I56):DC(J138) DT(I57):DA(J137) DC(I58):DG(J136) DG(I59):DC(J135) DT(I60):DA(J134) DA(I61):DT(J133) DG(I62):DC(J132) DA(I63):DT(J131) DC(I64):DG(J130) DA(I65):DT(J129) DG(I66):DC(J128) DC(I67):DG(J127) DT(I68):DA(J126) DC(I69):DG(J125) DT(I70):DA(J124) DA(I71):DT(J123) DG(I72):DC(J122) DC(I73):DG(J121) DA(I74):DT(J120) DC(I75):DG(J119) DC(I76):DG(J118) DG(I77):DC(J117) DC(I78):DG(J116) DT(I79):DA(J115) DT(I80):DA(J114) DA(I81):DT(J113) DA(I82):DT(J112) DA(I83):DT(J111) DC(I84):DG(J110) DG(I85):DC(J109) DC(I86):DG(J108) DA(I87):DT(J107) DC(I88):DG(J106) DG(I89):DC(J105) DT(I90):DA(J104) DA(I91):DT(J103) DC(I92):DG(J102) DG(I93):DC(J101) DC(I94):DG(J100) DG(I95):DC(J99) DC(I96):DG(J98) DT(I97):DA(J97) DG(I98):DC(J96) DT(I99):DA(J95) DC(I100):DG(J94) DC(I101):DG(J93) DC(I102):DG(J92) DC(I103):DG(J91) DC(I104):DG(J90) DG(I105):DC(J89) DC(I106):DG(J88) DG(I107):DC(J87) DT(I108):DA(J86) DT(I109):DA(J85) DT(I110):DA(J84) DT(I111):DA(J83) DA(I112):DT(J82) DA(I113):DT(J81) DC(I114):DG(J80) DC(I115):DG(J79) DG(I116):DC(J78) DC(I117):DG(J77) DC(I118):DG(J76) DA(I119):DT(J75) DA(I120):DT(J74) DG(I121):DC(J73) DG(I122):DC(J72) DG(I123):DC(J71) DG(I124):DC(J70) DA(I125):DT(J69) DT(I126):DA(J68) DT(I127):DA(J67) DA(I128):DT(J66) DC(I129):DG(J65) DT(I130):DA(J64) DC(I131):DG(J63) DC(I132):DG(J62) DC(I133):DG(J61) DT(I134):DA(J60) DA(I135):DT(J59) DG(I136):DC(J58) DT(I137):DA(J57) DC(I138):DG(J56) DT(I139):DA(J55) DC(I140):DG(J54) DC(I141):DG(J53) DA(I142):DT(J52) DG(I143):DC(J51) DG(I144):DC(J50) DC(I145):DG(J49) DA(I146):DT(J48) DC(I147):DG(J47) DG(I148):DC(J46) DT(I149):DA(J45) DG(I150):DC(J44) DT(I151):DA(J43) DC(I152):DG(J42) DA(I153):DT(J41) DG(I154):DC(J40) DA(I155):DT(J39) DT(I156):DA(J38) DA(I157):DT(J37) DT(I158):DA(J36) DA(I159):DT(J35) DG(I160):DC(J34) DG(I161):DC(J33) DG(I162):DC(J32) DC(I163):DG(J31) DA(I164):DT(J30) DT(I165):DA(J29) DG(I166):DC(J28) DT(I167):DA(J27) DC(I168):DG(J26) DC(I169):DG(J25) DG(I170):DC(J24) DG(I171):DC(J23) DG(I172):DC(J22) DC(I173):DG(J21) DA(I174):DT(J20) DT(I175):DA(J19) DG(I176):DC(J18) DT(I177):DA(J17) DC(I178):DG(J16) DC(I179):DG(J15) chainN ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 2 0 0 0 0 0 0 0 0 0 0 ( 28) SER121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 12 1 0 0 0 0 0 0 0 0 0 0 0 0 (188) ASP281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRDrrteeenlrk >7xzy_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING 193 BASE-PAIR DNA WITH A P53 TARGET SEQUENCE organism=? DNA sequence DG(J15):DC(I179) DG(J16):DC(I178) DA(J17):DT(I177) DC(J18):DG(I176) DT(J20):DA(I174) DG(J21):DC(I173) DC(J22):DG(I172) DC(J23):DG(I171) DC(J24):DG(I170) DG(J25):DC(I169) DG(J26):DC(I168) DA(J27):DT(I167) DC(J28):DG(I166) DA(J29):DT(I165) DT(J30):DA(I164) DG(J31):DC(I163) DC(J32):DG(I162) DC(J33):DG(I161) DC(J34):DG(I160) DT(J35):DA(I159) DA(J36):DT(I158) DT(J37):DA(I157) DA(J38):DT(I156) DT(J39):DA(I155) DC(J40):DG(I154) DT(J41):DA(I153) DG(J42):DC(I152) DA(J43):DT(I151) DC(J44):DG(I150) DA(J45):DT(I149) DC(J46):DG(I148) DG(J47):DC(I147) DT(J48):DA(I146) DG(J49):DC(I145) DC(J50):DG(I144) DC(J51):DG(I143) DT(J52):DA(I142) DG(J53):DC(I141) DG(J54):DC(I140) DA(J55):DT(I139) DG(J56):DC(I138) DA(J57):DT(I137) DC(J58):DG(I136) DT(J59):DA(I135) DA(J60):DT(I134) DG(J61):DC(I133) DG(J62):DC(I132) DG(J63):DC(I131) DA(J64):DT(I130) DG(J65):DC(I129) DT(J66):DA(I128) DA(J67):DT(I127) DA(J68):DT(I126) DT(J69):DA(I125) DC(J70):DG(I124) DC(J71):DG(I123) DC(J72):DG(I122) DC(J73):DG(I121) DT(J74):DA(I120) DT(J75):DA(I119) DG(J76):DC(I118) DG(J77):DC(I117) DC(J78):DG(I116) DG(J79):DC(I115) DG(J80):DC(I114) DT(J81):DA(I113) DT(J82):DA(I112) DA(J83):DT(I111) DA(J84):DT(I110) DA(J85):DT(I109) DA(J86):DT(I108) DC(J87):DG(I107) DG(J88):DC(I106) DC(J89):DG(I105) DG(J90):DC(I104) DG(J91):DC(I103) DG(J92):DC(I102) DG(J93):DC(I101) DG(J94):DC(I100) DA(J95):DT(I99) DC(J96):DG(I98) DA(J97):DT(I97) DG(J98):DC(I96) DC(J99):DG(I95) DG(J100):DC(I94) DC(J101):DG(I93) DG(J102):DC(I92) DT(J103):DA(I91) DA(J104):DT(I90) DC(J105):DG(I89) DG(J106):DC(I88) DT(J107):DA(I87) DG(J108):DC(I86) DC(J109):DG(I85) DG(J110):DC(I84) DT(J111):DA(I83) DT(J112):DA(I82) DT(J113):DA(I81) DA(J114):DT(I80) DA(J115):DT(I79) DG(J116):DC(I78) DC(J117):DG(I77) DG(J118):DC(I76) DG(J119):DC(I75) DT(J120):DA(I74) DG(J121):DC(I73) DC(J122):DG(I72) DT(J123):DA(I71) DA(J124):DT(I70) DG(J125):DC(I69) DA(J126):DT(I68) DG(J127):DC(I67) DC(J128):DG(I66) DT(J129):DA(I65) DG(J130):DC(I64) DT(J131):DA(I63) DC(J132):DG(I62) DT(J133):DA(I61) DA(J134):DT(I60) DC(J135):DG(I59) DG(J136):DC(I58) DA(J137):DT(I57) DC(J138):DG(I56) DC(J139):DG(I55) DA(J140):DT(I54) DA(J141):DT(I53) DT(J142):DA(I52) DT(J143):DA(I51) DG(J144):DC(I50) DA(J145):DT(I49) DG(J146):DC(I48) DC(J147):DG(I47) DG(J148):DC(I46) DG(J149):DC(I45) DC(J150):DG(I44) DC(J151):DG(I43) DT(J152):DA(I42) DC(J153):DG(I41) DG(J154):DC(I40) DG(J155):DC(I39) DC(J156):DG(I38) DA(J157):DT(I37) DC(J158):DG(I36) DC(J159):DG(I35) DG(J160):DC(I34) DG(J161):DC(I33) DA(J162):DT(I32) DT(J163):DA(I31) DT(J164):DA(I30) DC(J165):DG(I29) DT(J166):DA(I28) DC(J167):DG(I27) DA(J168):DT(I26) DG(J169):DC(I25) DG(J170):DC(I24) DC(J171):DG(I23) DC(J172):DG(I22) DT(J173):DA(I21) DG(J174):DC(I20) DG(J175):DC(I19) DC(J176):DG(I18) DT(J177):DA(I17) DC(J178):DG(I16) DG(J179):DC(I15) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 15) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7xzy_C:Histone-fold; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING 193 BASE-PAIR DNA WITH A P53 TARGET SEQUENCE organism=? DNA sequence DG(J15):DC(I179) DG(J16):DC(I178) DA(J17):DT(I177) DC(J18):DG(I176) DT(J20):DA(I174) DG(J21):DC(I173) DC(J22):DG(I172) DC(J23):DG(I171) DC(J24):DG(I170) DG(J25):DC(I169) DG(J26):DC(I168) DA(J27):DT(I167) DC(J28):DG(I166) DA(J29):DT(I165) DT(J30):DA(I164) DG(J31):DC(I163) DC(J32):DG(I162) DC(J33):DG(I161) DC(J34):DG(I160) DT(J35):DA(I159) DA(J36):DT(I158) DT(J37):DA(I157) DA(J38):DT(I156) DT(J39):DA(I155) DC(J40):DG(I154) DT(J41):DA(I153) DG(J42):DC(I152) DA(J43):DT(I151) DC(J44):DG(I150) DA(J45):DT(I149) DC(J46):DG(I148) DG(J47):DC(I147) DT(J48):DA(I146) DG(J49):DC(I145) DC(J50):DG(I144) DC(J51):DG(I143) DT(J52):DA(I142) DG(J53):DC(I141) DG(J54):DC(I140) DA(J55):DT(I139) DG(J56):DC(I138) DA(J57):DT(I137) DC(J58):DG(I136) DT(J59):DA(I135) DA(J60):DT(I134) DG(J61):DC(I133) DG(J62):DC(I132) DG(J63):DC(I131) DA(J64):DT(I130) DG(J65):DC(I129) DT(J66):DA(I128) DA(J67):DT(I127) DA(J68):DT(I126) DT(J69):DA(I125) DC(J70):DG(I124) DC(J71):DG(I123) DC(J72):DG(I122) DC(J73):DG(I121) DT(J74):DA(I120) DT(J75):DA(I119) DG(J76):DC(I118) DG(J77):DC(I117) DC(J78):DG(I116) DG(J79):DC(I115) DG(J80):DC(I114) DT(J81):DA(I113) DT(J82):DA(I112) DA(J83):DT(I111) DA(J84):DT(I110) DA(J85):DT(I109) DA(J86):DT(I108) DC(J87):DG(I107) DG(J88):DC(I106) DC(J89):DG(I105) DG(J90):DC(I104) DG(J91):DC(I103) DG(J92):DC(I102) DG(J93):DC(I101) DG(J94):DC(I100) DA(J95):DT(I99) DC(J96):DG(I98) DA(J97):DT(I97) DG(J98):DC(I96) DC(J99):DG(I95) DG(J100):DC(I94) DC(J101):DG(I93) DG(J102):DC(I92) DT(J103):DA(I91) DA(J104):DT(I90) DC(J105):DG(I89) DG(J106):DC(I88) DT(J107):DA(I87) DG(J108):DC(I86) DC(J109):DG(I85) DG(J110):DC(I84) DT(J111):DA(I83) DT(J112):DA(I82) DT(J113):DA(I81) DA(J114):DT(I80) DA(J115):DT(I79) DG(J116):DC(I78) DC(J117):DG(I77) DG(J118):DC(I76) DG(J119):DC(I75) DT(J120):DA(I74) DG(J121):DC(I73) DC(J122):DG(I72) DT(J123):DA(I71) DA(J124):DT(I70) DG(J125):DC(I69) DA(J126):DT(I68) DG(J127):DC(I67) DC(J128):DG(I66) DT(J129):DA(I65) DG(J130):DC(I64) DT(J131):DA(I63) DC(J132):DG(I62) DT(J133):DA(I61) DA(J134):DT(I60) DC(J135):DG(I59) DG(J136):DC(I58) DA(J137):DT(I57) DC(J138):DG(I56) DC(J139):DG(I55) DA(J140):DT(I54) DA(J141):DT(I53) DT(J142):DA(I52) DT(J143):DA(I51) DG(J144):DC(I50) DA(J145):DT(I49) DG(J146):DC(I48) DC(J147):DG(I47) DG(J148):DC(I46) DG(J149):DC(I45) DC(J150):DG(I44) DC(J151):DG(I43) DT(J152):DA(I42) DC(J153):DG(I41) DG(J154):DC(I40) DG(J155):DC(I39) DC(J156):DG(I38) DA(J157):DT(I37) DC(J158):DG(I36) DC(J159):DG(I35) DG(J160):DC(I34) DG(J161):DC(I33) DA(J162):DT(I32) DT(J163):DA(I31) DT(J164):DA(I30) DC(J165):DG(I29) DT(J166):DA(I28) DC(J167):DG(I27) DA(J168):DT(I26) DG(J169):DC(I25) DG(J170):DC(I24) DC(J171):DG(I23) DC(J172):DG(I22) DT(J173):DA(I21) DG(J174):DC(I20) DG(J175):DC(I19) DC(J176):DG(I18) DT(J177):DA(I17) DC(J178):DG(I16) DG(J179):DC(I15) chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk >7xzz_N:p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME IN COMPLEX WITH P53 organism=? DNA sequence DG(J15):DC(I155) DG(J16):DC(I154) DA(J17):DT(I153) DC(J18):DG(I152) DA(J19):DT(I151) DT(J20):DA(I150) DG(J21):DC(I149) DC(J22):DG(I148) DC(J23):DG(I147) DC(J24):DG(I146) DG(J25):DC(I145) DG(J26):DC(I144) DA(J27):DT(I143) DC(J28):DG(I142) DA(J29):DT(I141) DT(J30):DA(I140) DG(J31):DC(I139) DC(J32):DG(I138) DC(J33):DG(I137) DC(J34):DG(I136) DT(J35):DA(I135) DA(J36):DT(I134) DT(J37):DA(I133) DA(J38):DT(I132) DT(J39):DG(I130) DT(J41):DA(I129) DG(J42):DC(I128) DA(J43):DT(I127) DC(J44):DG(I126) DA(J45):DT(I125) DC(J46):DG(I124) DG(J47):DC(I123) DT(J48):DA(I122) DG(J49):DC(I121) DC(J50):DG(I120) DC(J51):DG(I119) DT(J52):DA(I118) DG(J53):DC(I117) DG(J54):DC(I116) DA(J55):DT(I115) DG(J56):DC(I114) DA(J57):DT(I113) DC(J58):DG(I112) DT(J59):DA(I111) DA(J60):DT(I110) DG(J61):DC(I109) DG(J62):DC(I108) DG(J63):DC(I107) DA(J64):DT(I106) DG(J65):DC(I105) DT(J66):DA(I104) DA(J67):DT(I103) DA(J68):DT(I102) DT(J69):DA(I101) DC(J70):DG(I100) DC(J71):DG(I99) DC(J72):DG(I98) DC(J73):DG(I97) DT(J74):DA(I96) DT(J75):DA(I95) DG(J76):DC(I94) DG(J77):DC(I93) DC(J78):DG(I92) DG(J79):DC(I91) DG(J80):DC(I90) DT(J81):DA(I89) DT(J82):DA(I88) DA(J83):DT(I87) DA(J84):DT(I86) DA(J85):DT(I85) DA(J86):DT(I84) DC(J87):DG(I83) DG(J88):DC(I82) DC(J89):DG(I81) DG(J90):DC(I80) DG(J91):DC(I79) DG(J92):DC(I78) DG(J93):DC(I77) DG(J94):DC(I76) DA(J95):DT(I75) DC(J96):DG(I74) DA(J97):DT(I73) DG(J98):DC(I72) DC(J99):DG(I71) DG(J100):DC(I70) DC(J101):DG(I69) DG(J102):DC(I68) DT(J103):DA(I67) DA(J104):DT(I66) DC(J105):DG(I65) DG(J106):DC(I64) DT(J107):DA(I63) DG(J108):DC(I62) DC(J109):DG(I61) DG(J110):DC(I60) DT(J111):DA(I59) DT(J112):DA(I58) DT(J113):DA(I57) DA(J114):DT(I56) DA(J115):DT(I55) DG(J116):DC(I54) DC(J117):DG(I53) DG(J118):DC(I52) DG(J119):DC(I51) DT(J120):DA(I50) DG(J121):DC(I49) DC(J122):DG(I48) DT(J123):DA(I47) DA(J124):DT(I46) DG(J125):DC(I45) DA(J126):DT(I44) DG(J127):DC(I43) DC(J128):DG(I42) DT(J129):DA(I41) DG(J130):DC(I40) DT(J131):DA(I39) DC(J132):DG(I38) DT(J133):DA(I37) DA(J134):DT(I36) DC(J135):DG(I35) DG(J136):DC(I34) DA(J137):DT(I33) DC(J138):DG(I32) DC(J139):DG(I31) DA(J140):DT(I30) DA(J141):DT(I29) DT(J142):DA(I28) DT(J143):DA(I27) DG(J144):DC(I26) DA(J145):DT(I25) DG(J146):DC(I24) DC(J147):DG(I23) DG(J148):DC(I22) DG(J149):DC(I21) DC(J150):DG(I20) DC(J151):DG(I19) DT(J152):DA(I18) DC(J153):DG(I17) DG(J154):DC(I16) DG(J155):DC(I15) DC(J156):DG(I14) DA(J157):DT(I13) DC(J158):DG(I12) DC(J159):DG(I11) DG(J160):DC(I10) DG(J161):DC(I9) DA(J162):DT(I8) DT(J163):DA(I7) DT(J164):DA(I6) DC(J165):DG(I5) DT(J166):DA(I4) DC(J167):DG(I3) DA(J168):DT(I2) DG(J169):DC(I1) chainN ( 27) LYS120 0 0 0 0 0 0 0 0 0 0 2 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) SER121 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ALA276 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) CYS277 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG280 0 0 0 0 0 0 0 0 0 0 0 0 1 12 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) ASP281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRDrrteeenlrk >7y00_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING 169 BASE-PAIR DNA WITH A P53 TARGET SEQUENCE organism=? DNA sequence DG(J15):DC(I155) DG(J16):DC(I154) DA(J17):DT(I153) DC(J18):DG(I152) DT(J20):DA(I150) DG(J21):DC(I149) DC(J22):DG(I148) DC(J23):DG(I147) DC(J24):DG(I146) DG(J25):DC(I145) DG(J26):DC(I144) DA(J27):DT(I143) DC(J28):DG(I142) DA(J29):DT(I141) DT(J30):DA(I140) DG(J31):DC(I139) DC(J32):DG(I138) DC(J33):DG(I137) DC(J34):DG(I136) DT(J35):DA(I135) DA(J36):DT(I134) DT(J37):DA(I133) DA(J38):DT(I132) DT(J39):DA(I131) DC(J40):DG(I130) DT(J41):DA(I129) DG(J42):DC(I128) DA(J43):DT(I127) DC(J44):DG(I126) DA(J45):DT(I125) DC(J46):DG(I124) DG(J47):DC(I123) DT(J48):DA(I122) DG(J49):DC(I121) DC(J50):DG(I120) DC(J51):DG(I119) DT(J52):DA(I118) DG(J53):DC(I117) DG(J54):DC(I116) DA(J55):DT(I115) DG(J56):DC(I114) DA(J57):DT(I113) DC(J58):DG(I112) DT(J59):DA(I111) DA(J60):DT(I110) DG(J61):DC(I109) DG(J62):DC(I108) DG(J63):DC(I107) DA(J64):DT(I106) DG(J65):DC(I105) DT(J66):DA(I104) DA(J67):DT(I103) DA(J68):DT(I102) DT(J69):DA(I101) DC(J70):DG(I100) DC(J71):DG(I99) DC(J72):DG(I98) DC(J73):DG(I97) DT(J74):DA(I96) DT(J75):DA(I95) DG(J76):DC(I94) DG(J77):DC(I93) DC(J78):DG(I92) DG(J79):DC(I91) DG(J80):DC(I90) DT(J81):DA(I89) DT(J82):DA(I88) DA(J83):DT(I87) DA(J84):DT(I86) DA(J85):DT(I85) DA(J86):DT(I84) DC(J87):DG(I83) DG(J88):DC(I82) DC(J89):DG(I81) DG(J90):DC(I80) DG(J91):DC(I79) DG(J92):DC(I78) DG(J93):DC(I77) DG(J94):DC(I76) DA(J95):DT(I75) DC(J96):DG(I74) DA(J97):DT(I73) DG(J98):DC(I72) DC(J99):DG(I71) DG(J100):DC(I70) DC(J101):DG(I69) DG(J102):DC(I68) DT(J103):DA(I67) DA(J104):DT(I66) DC(J105):DG(I65) DG(J106):DC(I64) DT(J107):DA(I63) DG(J108):DC(I62) DC(J109):DG(I61) DG(J110):DC(I60) DT(J111):DA(I59) DT(J112):DA(I58) DT(J113):DA(I57) DA(J114):DT(I56) DA(J115):DT(I55) DG(J116):DC(I54) DC(J117):DG(I53) DG(J118):DC(I52) DG(J119):DC(I51) DT(J120):DA(I50) DG(J121):DC(I49) DC(J122):DG(I48) DT(J123):DA(I47) DA(J124):DT(I46) DG(J125):DC(I45) DA(J126):DT(I44) DG(J127):DC(I43) DC(J128):DG(I42) DT(J129):DA(I41) DG(J130):DC(I40) DT(J131):DA(I39) DC(J132):DG(I38) DT(J133):DA(I37) DA(J134):DT(I36) DC(J135):DG(I35) DG(J136):DC(I34) DA(J137):DT(I33) DC(J138):DG(I32) DC(J139):DG(I31) DA(J140):DT(I30) DA(J141):DT(I29) DT(J142):DA(I28) DT(J143):DA(I27) DG(J144):DC(I26) DA(J145):DT(I25) DG(J146):DC(I24) DC(J147):DG(I23) DG(J148):DC(I22) DG(J149):DC(I21) DC(J150):DG(I20) DC(J151):DG(I19) DT(J152):DA(I18) DC(J153):DG(I17) DG(J154):DC(I16) DG(J155):DC(I15) DC(J156):DG(I14) DA(J157):DT(I13) DC(J158):DG(I12) DC(J159):DG(I11) DG(J160):DC(I10) DG(J161):DC(I9) DA(J162):DT(I8) DT(J163):DA(I7) DT(J164):DA(I6) DC(J165):DG(I5) DT(J166):DA(I4) DC(J167):DG(I3) DA(J168):DT(I2) DG(J169):DC(I1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsrkesysiyvykvlkqvhpdtgisskamGimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >7y00_G:Histone-fold; title=CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING 169 BASE-PAIR DNA WITH A P53 TARGET SEQUENCE organism=? DNA sequence DC(I1):DG(J169) DT(I2):DA(J168) DG(I3):DC(J167) DA(I4):DT(J166) DG(I5):DC(J165) DA(I6):DT(J164) DA(I7):DT(J163) DT(I8):DA(J162) DC(I9):DG(J161) DC(I10):DG(J160) DG(I11):DC(J159) DG(I12):DC(J158) DT(I13):DA(J157) DG(I14):DC(J156) DC(I15):DG(J155) DC(I16):DG(J154) DG(I17):DC(J153) DA(I18):DT(J152) DG(I19):DC(J151) DG(I20):DC(J150) DC(I21):DG(J149) DC(I22):DG(J148) DG(I23):DC(J147) DC(I24):DG(J146) DT(I25):DA(J145) DC(I26):DG(J144) DA(I27):DT(J143) DA(I28):DT(J142) DT(I29):DA(J141) DT(I30):DA(J140) DG(I31):DC(J139) DG(I32):DC(J138) DT(I33):DA(J137) DC(I34):DG(J136) DG(I35):DC(J135) DT(I36):DA(J134) DA(I37):DT(J133) DG(I38):DC(J132) DA(I39):DT(J131) DC(I40):DG(J130) DA(I41):DT(J129) DG(I42):DC(J128) DC(I43):DG(J127) DT(I44):DA(J126) DC(I45):DG(J125) DT(I46):DA(J124) DA(I47):DT(J123) DG(I48):DC(J122) DC(I49):DG(J121) DA(I50):DT(J120) DC(I51):DG(J119) DC(I52):DG(J118) DG(I53):DC(J117) DC(I54):DG(J116) DT(I55):DA(J115) DT(I56):DA(J114) DA(I57):DT(J113) DA(I58):DT(J112) DA(I59):DT(J111) DC(I60):DG(J110) DG(I61):DC(J109) DC(I62):DG(J108) DA(I63):DT(J107) DC(I64):DG(J106) DG(I65):DC(J105) DT(I66):DA(J104) DA(I67):DT(J103) DC(I68):DG(J102) DG(I69):DC(J101) DC(I70):DG(J100) DG(I71):DC(J99) DC(I72):DG(J98) DT(I73):DA(J97) DG(I74):DC(J96) DT(I75):DA(J95) DC(I76):DG(J94) DC(I77):DG(J93) DC(I78):DG(J92) DC(I79):DG(J91) DC(I80):DG(J90) DG(I81):DC(J89) DC(I82):DG(J88) DG(I83):DC(J87) DT(I84):DA(J86) DT(I85):DA(J85) DT(I86):DA(J84) DT(I87):DA(J83) DA(I88):DT(J82) DA(I89):DT(J81) DC(I90):DG(J80) DC(I91):DG(J79) DG(I92):DC(J78) DC(I93):DG(J77) DC(I94):DG(J76) DA(I95):DT(J75) DA(I96):DT(J74) DG(I97):DC(J73) DG(I98):DC(J72) DG(I99):DC(J71) DG(I100):DC(J70) DA(I101):DT(J69) DT(I102):DA(J68) DT(I103):DA(J67) DA(I104):DT(J66) DC(I105):DG(J65) DT(I106):DA(J64) DC(I107):DG(J63) DC(I108):DG(J62) DC(I109):DG(J61) DT(I110):DA(J60) DA(I111):DT(J59) DG(I112):DC(J58) DT(I113):DA(J57) DC(I114):DG(J56) DT(I115):DA(J55) DC(I116):DG(J54) DC(I117):DG(J53) DA(I118):DT(J52) DG(I119):DC(J51) DG(I120):DC(J50) DC(I121):DG(J49) DA(I122):DT(J48) DC(I123):DG(J47) DG(I124):DC(J46) DT(I125):DA(J45) DG(I126):DC(J44) DT(I127):DA(J43) DC(I128):DG(J42) DA(I129):DT(J41) DG(I130):DC(J40) DA(I131):DT(J39) DT(I132):DA(J38) DA(I133):DT(J37) DT(I134):DA(J36) DA(I135):DT(J35) DG(I136):DC(J34) DG(I137):DC(J33) DG(I138):DC(J32) DC(I139):DG(J31) DA(I140):DT(J30) DT(I141):DA(J29) DG(I142):DC(J28) DT(I143):DA(J27) DC(I144):DG(J26) DC(I145):DG(J25) DG(I146):DC(J24) DG(I147):DC(J23) DG(I148):DC(J22) DC(I149):DG(J21) DA(I150):DT(J20) DG(I152):DC(J18) DT(I153):DA(J17) DC(I154):DG(J16) DC(I155):DG(J15) chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >7y01_A: title=CRYSTAL STRUCTURE OF ZMMCM10 IN COMPLEX WITH 16NT SSDNA AT 2.8. ANGSTROM RESOLUTION organism=Zea mays DNA sequence DC(B1) DC(B2) DC(B3) DC(B4) DC(B5) DC(B6) DC(B7) DC(B8) DC(B9) DC(B10) DC(B11) DC(B12) chainA ( 60) ASP140 0 0 0 0 0 0 0 0 7 3 0 0 ( 67) SER147 0 0 0 0 2 0 0 0 0 0 0 0 ( 69) LYS149 0 0 0 5 0 0 0 0 0 0 0 0 ( 71) SER151 0 0 0 0 2 0 0 0 0 0 0 0 ( 75) ILE155 0 0 0 0 0 0 1 0 0 0 0 0 ( 77) LYS157 0 0 0 0 0 0 4 0 0 0 0 0 ( 87) SER167 0 0 0 0 0 0 9 0 0 0 0 0 ( 89) PHE169 0 0 0 0 0 12 4 0 0 0 0 0 ( 91) PHE171 0 0 0 0 15 12 0 0 0 0 0 0 (115) ARG195 0 0 0 0 0 33 0 0 0 0 0 0 (121) LYS201 0 0 0 0 0 0 12 0 0 0 0 0 (124) SER204 0 0 0 0 0 1 2 0 0 0 0 0 (126) SER206 0 0 0 0 0 4 0 0 0 0 0 0 (128) ALA208 0 0 0 0 3 0 0 0 0 0 0 0 (149) ARG229 0 0 0 0 0 0 0 0 6 10 0 0 (155) CYS235 0 0 0 0 0 0 0 0 0 4 0 0 (156) THR236 0 0 0 0 0 0 0 0 1 10 0 0 (157) MET237 0 0 0 0 0 0 0 0 0 9 0 0 (169) PHE249 0 0 0 0 0 0 0 0 0 0 26 0 prot.sequence steilvdkysglrikhltlspleisnrfadirfvritalknsvgsdrfsgcwatagvllDkgvqrvSaKgSsysIwKmgaldetdvSlFlFgdahvhysgaavgsvfavfngnvRmdnggKgfSmSvAsvgqmlkmgvasdfglckgkRkdgvaCTMainkskgsyckFhs >7y3i_AC:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF DNA BOUND SALL4 organism=Homo sapiens DNA sequence DG(G1):DC(H12) DG(G2):DC(H11) DA(G3):DT(H10) DA(G4):DT(H9) DA(G5):DT(H8) DT(G6):DA(H7) DA(G7):DT(H6) DT(G8):DA(H5) DT(G9):DA(H4) DA(G10):DT(H3) DC(G11):DG(H2) DC(G12):DG(H1) chainA ( 13) SER880 0 0 0 0 2 0 0 0 0 0 0 0 ( 16) SER883 0 0 3 1 0 0 0 0 0 0 0 0 ( 20) ILE887 0 0 0 0 0 0 1 0 0 0 0 0 ( 42) THR909 0 0 0 0 0 0 1 0 0 0 0 0 ( 45) ASN912 0 0 0 0 0 0 0 11 9 0 0 0 ( 48) VAL915 0 0 0 0 0 0 0 0 0 1 0 0 chainC ( 14) THR908 0 0 0 0 0 0 0 0 0 1 0 0 ( 15) THR909 0 0 0 0 0 0 0 0 0 0 2 3 ( 18) ASN912 0 0 0 0 0 0 0 0 13 12 3 0 ( 21) VAL915 0 0 0 0 0 0 0 1 2 0 0 0 prot.sequence kqhgctrcgknfSSaSalqIherthtgekpfvcnicgraftTkgNlkVhymthg/ekpfvcnicgrafTTkgNlkVhymthg >7y3i_B:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF DNA BOUND SALL4 organism=Homo sapiens DNA sequence DG(L1):DC(K11) DG(L2):DC(K10) DA(L3):DT(K9) DA(L4):DT(K8) DA(L5):DT(K7) DT(L6):DA(K6) DA(L7):DT(K5) DT(L8):DA(K4) DT(L9):DA(K3) DA(L10):DT(K2) DC(L11):DG(K1) DC(L12):DG(K0) chainB ( 12) SER880 0 0 0 0 2 0 0 0 0 0 0 0 ( 15) SER883 0 0 3 1 0 0 0 0 0 0 0 0 ( 19) ILE887 0 0 0 0 0 0 1 0 0 0 0 0 ( 41) THR909 0 0 0 0 0 0 1 0 0 0 0 0 ( 44) ASN912 0 0 0 0 0 0 0 11 8 0 0 0 ( 47) VAL915 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence qhgctrcgknfSSaSalqIherthtgekpfvcnicgraftTkgNlkVhymthg >7y3i_BD:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF DNA BOUND SALL4 organism=Homo sapiens DNA sequence DG(L1):DC(K11) DG(L2):DC(K10) DA(L3):DT(K9) DA(L4):DT(K8) DA(L5):DT(K7) DT(L6):DA(K6) DA(L7):DT(K5) DT(L8):DA(K4) DT(L9):DA(K3) DA(L10):DT(K2) DC(L11):DG(K1) DC(L12):DG(K0) chainB ( 12) SER880 0 0 0 0 2 0 0 0 0 0 0 0 ( 15) SER883 0 0 3 1 0 0 0 0 0 0 0 0 ( 19) ILE887 0 0 0 0 0 0 1 0 0 0 0 0 ( 41) THR909 0 0 0 0 0 0 1 0 0 0 0 0 ( 44) ASN912 0 0 0 0 0 0 0 11 8 0 0 0 ( 47) VAL915 0 0 0 0 0 0 0 0 0 1 0 0 chainD prot.sequence qhgctrcgknfSSaSalqIherthtgekpfvcnicgraftTkgNlkVhymthg/kpfvcnicgraFTtKgnlKvhymthg >7y3k_AB:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF SALL4 ZFC4 BOUND WITH 16 BP AT-RICH DSDNA organism=Homo sapiens DNA sequence DG(G1):DC(H16) DG(G2):DC(H15) DA(G3):DT(H14) DA(G4):DT(H13) DA(G5):DT(H12) DT(G6):DA(H11) DA(G7):DT(H10) DT(G8):DA(H9) DT(G9):DA(H8) DA(G10):DT(H7) DT(G11):DA(H6) DA(G12):DT(H5) DT(G13):DA(H4) DT(G14):DA(H3) DC(G15):DG(H2) DC(G16):DG(H1) chainA ( 13) SER880 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 14) SER881 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) SER883 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ILE887 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 42) THR909 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 45) ASN912 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 ( 48) VAL915 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainB ( 13) SER880 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 14) SER881 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 20) ILE887 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 42) THR909 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 45) ASN912 0 0 0 0 0 0 0 0 11 10 1 0 0 0 0 0 ( 48) VAL915 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence kqhgctrcgknfSSaSalqIherthtgekpfvcnicgraftTkgNlkVhymthg/kqhgctrcgknfSSasalqIherthtgekpfvcnicgraftTkgNlkVhymthg >7y3k_B:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF SALL4 ZFC4 BOUND WITH 16 BP AT-RICH DSDNA organism=Homo sapiens DNA sequence DG(G1):DC(H16) DG(G2):DC(H15) DA(G3):DT(H14) DA(G4):DT(H13) DA(G5):DT(H12) DT(G6):DA(H11) DA(G7):DT(H10) DT(G8):DA(H9) DT(G9):DA(H8) DA(G10):DT(H7) DT(G11):DA(H6) DA(G12):DT(H5) DT(G13):DA(H4) DT(G14):DA(H3) DC(G15):DG(H2) DC(G16):DG(H1) chainB ( 13) SER880 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 14) SER881 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 20) ILE887 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 42) THR909 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 45) ASN912 0 0 0 0 0 0 0 0 11 10 1 0 0 0 0 0 ( 48) VAL915 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence kqhgctrcgknfSSasalqIherthtgekpfvcnicgraftTkgNlkVhymthg >7y3l_A:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF SALL3 ZFC4 BOUND WITH 12 BP AT-RICH DSDNA organism=Homo sapiens DNA sequence DG(G1):DC(H12) DG(G2):DC(H11) DA(G3):DT(H10) DA(G4):DT(H9) DA(G5):DT(H8) DT(G6):DA(H7) DA(G7):DT(H6) DT(G8):DA(H5) DT(G9):DA(H4) DA(G10):DT(H3) DC(G11):DG(H2) DC(G12):DG(H1) chainA ( 13) SER1123 0 0 0 0 1 0 0 0 0 0 0 0 ( 16) SER1126 0 0 3 1 0 0 0 0 0 0 0 0 ( 20) ILE1130 0 0 0 0 0 0 1 0 0 0 0 0 ( 42) THR1152 0 0 0 0 0 0 1 0 0 0 0 0 ( 45) ASN1155 0 0 0 0 0 0 0 11 7 0 0 0 ( 48) VAL1158 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence kqhncqscgktfSsaSalqIherthtgekpfgcticgraftTkgNlkVhmgthmwnn >7y3m_AB:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF SALL4 ZFC1 BOUND WITH 16 BP AT-RICH DSDNA organism=Homo sapiens DNA sequence DG(H1):DC(G16) DG(H2):DC(G15) DA(H3):DT(G14) DA(H4):DT(G13) DT(H5):DA(G12) DA(H6):DT(G11) DT(H7):DA(G10) DA(H8):DT(G9) DA(H9):DT(G8) DT(H10):DA(G7) DA(H11):DT(G6) DT(H12):DA(G5) DT(H13):DA(G4) DT(H14):DA(G3) DC(H15):DG(G2) DC(H16):DG(G1) chainB ( 14) SER395 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ILE399 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 43) ASN424 0 0 0 0 0 0 8 11 0 0 0 0 0 0 0 0 ( 46) VAL427 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainA ( 16) SER395 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 20) ILE399 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 42) THR421 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 45) ASN424 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 ( 48) VAL427 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence ykhkckycskvfgtdSslqIhlrshtgerpfvcsvcghrftTkgNlkVhfhrhpqv/hkckycskvfgtdSslqIhlrshtgerpfvcsvcghrfttkgNlkVhfhrhpqvk >7y3m_CF:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF SALL4 ZFC1 BOUND WITH 16 BP AT-RICH DSDNA organism=Homo sapiens DNA sequence DG(D1):DC(E16) DG(D2):DC(E15) DA(D3):DT(E14) DA(D4):DT(E13) DA(D5):DT(E12) DT(D6):DA(E11) DA(D7):DT(E10) DT(D8):DA(E9) DT(D9):DA(E8) DA(D10):DT(E7) DT(D11):DA(E6) DA(D12):DT(E5) DT(D13):DA(E4) DT(D14):DA(E3) DC(D15):DG(E2) DC(D16):DG(E1) chainC ( 16) SER395 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ILE399 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 42) THR421 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 45) ASN424 0 0 0 0 0 0 0 10 11 0 0 0 0 0 0 0 chainF ( 19) ILE399 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 44) ASN424 0 0 0 0 0 0 0 0 11 10 0 0 0 0 0 0 ( 47) VAL427 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 prot.sequence ykhkckycskvfgtdSslqIhlrshtgerpfvcsvcghrftTkgNlkvhfhrhpqvkanpqlfaefqdkv/khkckycskvfgtdsslqIhlrshtgerpfvcsvcghrfttkgNlkVhfhrhpqvkanpqlfaefq >7y3m_I:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF SALL4 ZFC1 BOUND WITH 16 BP AT-RICH DSDNA organism=Homo sapiens DNA sequence DG(K1):DC(L16) DG(K2):DC(L15) DA(K3):DT(L14) DA(K4):DT(L13) DA(K5):DT(L12) DT(K6):DA(L11) DA(K7):DT(L10) DT(K8):DA(L9) DT(K9):DA(L8) DA(K10):DT(L7) DT(K11):DA(L6) DA(K12):DT(L5) DT(K13):DA(L4) DT(K14):DA(L3) DC(K15):DG(L2) DC(K16):DG(L1) chainI ( 15) SER395 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR421 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 44) ASN424 0 0 0 0 0 0 2 13 13 0 0 0 0 0 0 0 ( 47) VAL427 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 51) ARG431 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence khkckycskvfgtdSslqihlrshtgerpfvcsvcghrftTkgNlkVhfhRhpq >7y3m_IJ:beta-beta-alpha_zinc_fingers; title=STRUCTURE OF SALL4 ZFC1 BOUND WITH 16 BP AT-RICH DSDNA organism=Homo sapiens DNA sequence DG(K1):DC(L16) DG(K2):DC(L15) DA(K3):DT(L14) DA(K4):DT(L13) DA(K5):DT(L12) DT(K6):DA(L11) DA(K7):DT(L10) DT(K8):DA(L9) DT(K9):DA(L8) DA(K10):DT(L7) DT(K11):DA(L6) DA(K12):DT(L5) DT(K13):DA(L4) DT(K14):DA(L3) DC(K15):DG(L2) DC(K16):DG(L1) chainJ ( 14) SER395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 ( 18) ILE399 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 43) ASN424 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 chainI ( 15) SER395 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) THR421 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 44) ASN424 0 0 0 0 0 0 2 13 13 0 0 0 0 0 0 0 ( 47) VAL427 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 51) ARG431 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 prot.sequence khkckycskvfgtdSslqihlrshtgerpfvcsvcghrftTkgNlkVhfhRhpq/hkckycskvfgtdSslqIhlrshtgerpfvcsvcghrfttkgNlkvhfhrhpq >7y43_A: title=CRYSTAL STRUCTURE OF THE KAT6A WH DOMAIN AND ITS BOUND DOUBLE STRANDED DNA organism=? DNA sequence DG(B1):DC(C14) DG(B2):DC(C13) DA(B3):DT(C12) DG(B4):DC(C11) DT(B5):DA(C10) DG(B6):DC(C9) DC(B7):DG(C8) DG(B8):DC(C7) DC(B9):DG(C6) DA(B10):DT(C5) DC(B11):DG(C4) DT(B12):DA(C3) DC(B13):DG(C2) DC(B14):DG(C1) chainA ( 22) LYS24 0 0 0 0 0 0 10 12 15 0 0 0 0 0 ( 23) GLN25 0 0 0 0 0 3 6 5 0 0 0 0 0 0 ( 77) ARG79 0 0 0 0 0 0 0 0 0 0 1 9 10 2 prot.sequence klanplytewileaikkvkkQKQrpseericnavssshgldrktvleqlelsvkdgtilkvsnkglnsykdpdnpgRia >7y5w_ABCDEFG:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE LEFT-HANDED DI-TETRASOME organism=? DNA sequence DT(J15):DA(I133) DG(J16):DC(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J58):DA(I91) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J88):DA(I61) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) chainA chainB ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 25) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 26) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG prot.sequence ellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrq/ellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr/tellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/rdniqgitkpairrlarrggvkrisGliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqg/lirklpfqrlvreiaqdfktdlrfqSsavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge >7y5w_E:Histone-fold; title=CRYO-EM STRUCTURE OF THE LEFT-HANDED DI-TETRASOME organism=? DNA sequence DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I61):DT(J88) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I91):DT(J58) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DC(I132):DG(J16) DA(I133):DT(J15) chainE ( 26) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge >7y60_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF HUMAN CAF1LC BOUND RIGHT-HANDED DI-TETRASOME organism=? DNA sequence DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DA(J71):DC(I78) DA(J73):DG(I76) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) chainG ( 25) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainH chainE chainF ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA chainB ( 20) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/iqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygf/valreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtl/rpgtvalreirryqkstellIrklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtl/ellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkrisgLiyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtly >7y7i_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CHICKEN KNL2 IN COMPLEX WITH THE CENP-A NUCLEOSOME organism=? DNA sequence DT(J147):DA(I144) DC(J148):DG(I143) DG(J149):DC(I142) DA(J150):DT(I141) DT(J151):DA(I140) DG(J152):DC(I139) DT(J153):DA(I138) DA(J154):DT(I137) DT(J155):DA(I136) DA(J156):DT(I135) DT(J157):DA(I134) DA(J158):DT(I133) DT(J159):DA(I132) DC(J160):DG(I131) DT(J161):DA(I130) DG(J162):DC(I129) DA(J163):DT(I128) DC(J164):DG(I127) DT(J165):DA(I126) DC(J166):DG(I125) DG(J167):DC(I124) DT(J168):DA(I123) DG(J169):DC(I122) DC(J170):DG(I121) DC(J171):DG(I120) DT(J172):DA(I119) DG(J173):DC(I118) DG(J174):DC(I117) DA(J175):DT(I116) DG(J176):DC(I115) DA(J177):DT(I114) DC(J178):DG(I113) DT(J179):DA(I112) DA(J180):DT(I111) DG(J181):DC(I110) DG(J182):DC(I109) DG(J183):DC(I108) DA(J184):DT(I107) DG(J185):DC(I106) DT(J186):DA(I105) DA(J187):DT(I104) DA(J188):DT(I103) DT(J189):DA(I102) DC(J190):DG(I101) DC(J191):DG(I100) DC(J192):DG(I99) DC(J193):DG(I98) DT(J194):DA(I97) DT(J195):DA(I96) DG(J196):DC(I95) DG(J197):DC(I94) DC(J198):DG(I93) DG(J199):DC(I92) DG(J200):DC(I91) DT(J201):DA(I90) DT(J202):DA(I89) DA(J203):DT(I88) DA(J204):DT(I87) DA(J205):DT(I86) DA(J206):DT(I85) DC(J207):DG(I84) DG(J208):DC(I83) DC(J209):DG(I82) DG(J210):DC(I81) DG(J211):DC(I80) DG(J212):DC(I79) DG(J213):DC(I78) DG(J214):DC(I77) DA(J215):DT(I76) DC(J216):DG(I75) DA(J217):DT(I74) DG(J218):DC(I73) DC(J219):DG(I72) DG(J220):DC(I71) DC(J221):DG(I70) DG(J222):DC(I69) DT(J223):DA(I68) DA(J224):DT(I67) DC(J225):DG(I66) DG(J226):DC(I65) DT(J227):DA(I64) DG(J228):DC(I63) DC(J229):DG(I62) DG(J230):DC(I61) DT(J231):DA(I60) DT(J232):DA(I59) DT(J233):DA(I58) DA(J234):DT(I57) DA(J235):DT(I56) DG(J236):DC(I55) DC(J237):DG(I54) DG(J238):DC(I53) DG(J239):DC(I52) DT(J240):DA(I51) DG(J241):DC(I50) DC(J242):DG(I49) DT(J243):DA(I48) DA(J244):DT(I47) DG(J245):DC(I46) DA(J246):DT(I45) DG(J247):DC(I44) DC(J248):DG(I43) DT(J249):DA(I42) DG(J250):DC(I41) DT(J251):DA(I40) DC(J252):DG(I39) DT(J253):DA(I38) DA(J254):DT(I37) DC(J255):DG(I36) DG(J256):DC(I35) DA(J257):DT(I34) DC(J258):DG(I33) DC(J259):DG(I32) DA(J260):DT(I31) DT(J262):DT(I30) DT(J263):DA(I28) DG(J264):DC(I27) DA(J265):DT(I26) DG(J266):DC(I25) DC(J267):DG(I24) DG(J268):DC(I23) DG(J269):DC(I22) DC(J270):DG(I21) DC(J271):DG(I20) DT(J272):DA(I19) DC(J273):DG(I18) DG(J274):DC(I17) DG(J275):DC(I16) DC(J276):DG(I15) DA(J277):DT(I14) DC(J278):DG(I13) DC(J279):DG(I12) DG(J280):DC(I11) DG(J281):DC(I10) DG(J282):DC(I9) DA(J283):DT(I8) DT(J284):DA(I7) DT(J285):DA(I6) DC(J286):DG(I5) DT(J287):DA(I4) DG(J288):DC(I3) DA(J289):DT(I2) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) GLN65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 1) ARG12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 28) GLN65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 30) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRYrpgtvalreirryqkstellirrQpfarvvreicllftrgvdyRwqamallalqeaaeaflvhlledaylcslharrvtlypkdlqlarrlrglqgeg/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts/pHRYrpgtvalreirryqkstellirrQpfarvvreicllftrgvdyRwqamallalqeaaeaflvhlledaylcslharrvtlypkdlqlarrlrg/nIQGitkpairrlarrggvkrisgliyEetrgvlkvflenvirdavtYtehakrktvtamdvvyalkrqgrtlygfgg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >7y7i_E:Histone-fold; title=CHICKEN KNL2 IN COMPLEX WITH THE CENP-A NUCLEOSOME organism=? DNA sequence DT(J147):DA(I144) DC(J148):DG(I143) DG(J149):DC(I142) DA(J150):DT(I141) DT(J151):DA(I140) DG(J152):DC(I139) DT(J153):DA(I138) DA(J154):DT(I137) DT(J155):DA(I136) DA(J156):DT(I135) DT(J157):DA(I134) DA(J158):DT(I133) DT(J159):DA(I132) DC(J160):DG(I131) DT(J161):DA(I130) DG(J162):DC(I129) DA(J163):DT(I128) DC(J164):DG(I127) DT(J165):DA(I126) DC(J166):DG(I125) DG(J167):DC(I124) DT(J168):DA(I123) DG(J169):DC(I122) DC(J170):DG(I121) DC(J171):DG(I120) DT(J172):DA(I119) DG(J173):DC(I118) DG(J174):DC(I117) DA(J175):DT(I116) DG(J176):DC(I115) DA(J177):DT(I114) DC(J178):DG(I113) DT(J179):DA(I112) DA(J180):DT(I111) DG(J181):DC(I110) DG(J182):DC(I109) DG(J183):DC(I108) DA(J184):DT(I107) DG(J185):DC(I106) DT(J186):DA(I105) DA(J187):DT(I104) DA(J188):DT(I103) DT(J189):DA(I102) DC(J190):DG(I101) DC(J191):DG(I100) DC(J192):DG(I99) DC(J193):DG(I98) DT(J194):DA(I97) DT(J195):DA(I96) DG(J196):DC(I95) DG(J197):DC(I94) DC(J198):DG(I93) DG(J199):DC(I92) DG(J200):DC(I91) DT(J201):DA(I90) DT(J202):DA(I89) DA(J203):DT(I88) DA(J204):DT(I87) DA(J205):DT(I86) DA(J206):DT(I85) DC(J207):DG(I84) DG(J208):DC(I83) DC(J209):DG(I82) DG(J210):DC(I81) DG(J211):DC(I80) DG(J212):DC(I79) DG(J213):DC(I78) DG(J214):DC(I77) DA(J215):DT(I76) DC(J216):DG(I75) DA(J217):DT(I74) DG(J218):DC(I73) DC(J219):DG(I72) DG(J220):DC(I71) DC(J221):DG(I70) DG(J222):DC(I69) DT(J223):DA(I68) DA(J224):DT(I67) DC(J225):DG(I66) DG(J226):DC(I65) DT(J227):DA(I64) DG(J228):DC(I63) DC(J229):DG(I62) DG(J230):DC(I61) DT(J231):DA(I60) DT(J232):DA(I59) DT(J233):DA(I58) DA(J234):DT(I57) DA(J235):DT(I56) DG(J236):DC(I55) DC(J237):DG(I54) DG(J238):DC(I53) DG(J239):DC(I52) DT(J240):DA(I51) DG(J241):DC(I50) DC(J242):DG(I49) DT(J243):DA(I48) DA(J244):DT(I47) DG(J245):DC(I46) DA(J246):DT(I45) DG(J247):DC(I44) DC(J248):DG(I43) DT(J249):DA(I42) DG(J250):DC(I41) DT(J251):DA(I40) DC(J252):DG(I39) DT(J253):DA(I38) DA(J254):DT(I37) DC(J255):DG(I36) DG(J256):DC(I35) DA(J257):DT(I34) DC(J258):DG(I33) DC(J259):DG(I32) DA(J260):DT(I31) DT(J262):DT(I30) DT(J263):DA(I28) DG(J264):DC(I27) DA(J265):DT(I26) DG(J266):DC(I25) DC(J267):DG(I24) DG(J268):DC(I23) DG(J269):DC(I22) DC(J270):DG(I21) DC(J271):DG(I20) DT(J272):DA(I19) DC(J273):DG(I18) DG(J274):DC(I17) DG(J275):DC(I16) DC(J276):DG(I15) DA(J277):DT(I14) DC(J278):DG(I13) DC(J279):DG(I12) DG(J280):DC(I11) DG(J281):DC(I10) DG(J282):DC(I9) DA(J283):DT(I8) DT(J284):DA(I7) DT(J285):DA(I6) DC(J286):DG(I5) DT(J287):DA(I4) DG(J288):DC(I3) DA(J289):DT(I2) chainE ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 28) GLN65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRyrpgtvalreirryqkstellirrqpfarvvreicllftrgvdyrwqamallalqeaaeaflvhlledaylcslharrvtlypkdlqlarrlrg >7y7s_A: title=QDE-1 IN COMPLEX WITH DNA TEMPLATE, RNA PRIMER AND AMPNPP organism=Neurospora crassa DNA sequence DG(C9) DG(C8) DC(C7) DT(C6) DG(C5) DG(C4) DT(C3) DA(C2) DT(C1):DA(C2) chainA (156) THR546 0 0 0 0 0 0 0 4 4 (200) TYR590 0 0 0 0 0 0 0 12 12 (375) ARG783 0 0 1 0 0 0 0 0 0 (555) SER963 0 0 0 0 0 1 0 0 0 (556) PRO964 0 0 0 0 0 3 0 0 0 (674) LEU1082 0 0 0 0 0 0 14 0 0 (676) MET1084 0 0 0 0 0 0 0 6 6 prot.sequence hapvvaarlrniwpkfpkwlheaplavawevtrlfmhckvdledeslglkydpswstardvtdiwktlyrldafrkpfpekppnDvfvtamtgnfesKgSavvlsavldynpdnsptaplylvklkplmFeqgcrltrrfgpdrffeilipsptsTspsvppvvskqpgaveeviqwltmgqhslvgrqwraffakdagYrkplrefkpiikervhffaetgitfrpdepveqrtefkvsqmldwllqldnntwqphlklfsriqlglsktyaimtlephqirhhktdllspsgtgevmndgvgrmsrsvakrirdvlglgdvpsavqgrfgsakgmwvidvddtgdedwietypsqrkwecdfvdkhqrtlevRsvaselksaglnlQllpvledrardkvkmrqaigdrlindlqrqfseqkhalnrpvefrqwvyesyssratrvshgrvpflaglpdsqeetlnflmnsgfdpkkqkylqdiawdlqkrkcdtlksklnirvgrsayiymiadfwgvleenevhvgfsskfrdeeesftllsdcdvlvarSPahfpsdiqrvravfkpelhslkdviifstkgdvplakklsggdydgdmawvcwdpeivdgfvnaemplepdlsrylkkdkttfkqlmashgtgsaakeqttydmiqksfhfalqpnfLgMctnykerlcyinnsvsnkpaiilsslvgnlvdqskqgivfneaswaqlrrellggalslpdpmyksdswlgrgepthiidylkfsiarpaidkeleafhnamahfwdpdlasyytffkeisdksrssallfttlknrigevekeygrdskdpypvrvnqvyekwcaitpeskvirllelsfladremntwallrastafklyyhkspkfvwqmagrqlayikaqmtsrpgegapalmtafmyaglmpdkkftkqyvarleg >7y7t_A: title=QDE-1 IN COMPLEX WITH 12NT DNA TEMPLATE, ATP AND 3'-DGTP organism=Neurospora crassa DNA sequence DA(C4) DG(C5) DA(C6) DC(C7) DC(C8) DT(C9) DT(C10) DT(C11) DT(C12) chainA (348) ARG783 0 0 0 0 0 0 0 1 0 (647) LEU1082 0 0 0 7 0 0 0 0 0 (649) MET1084 0 0 3 0 0 0 0 0 0 prot.sequence apvaarlrniwpkfpkwlheaplavawevtrlfmhckvdledeslkydpswstardvtdiwktldafrpekppndvfvtamtgnfeskgsavvlsavldynpdnspaplylvklkplmfeqgcrltrrfgpdrffeilipsptspsvppvvskqaveeviqwltmgqhslvgrqwraffakdaiikervhffaetgitfrpepveqrtefkvsqmldwllqldnntwqphlklfsriqlglsktyaimtlephqirhhktdllspsgtgevmndgvgrmsrsvakrirdvlglgdvpsavqgrfgsakgmwvidvddtgdedwietypsqrkwecdfvdkhqrtlevRsvaselksaglnlqllpvledrardkvkmrqaigdrlindlqrqfseqkhalnrpvefrqwvyesyssratrvshgrvpflaglpdsqeetlnflmnsgfdpkkqkylqdiawdlqkrkcdtlksklnirvgrsayiymiadfwgvleenevhvgfsskfrdeeesftllsdcdvlvarspahfpsdiqrvravfkpelhslkdviifstkgdvplakklsggdydgdmawvcwdpeivdgfvnaemplepdlsrylkkdkttfkqlmashgtgsaakeqttydmiqksfhfalqpnfLgMctnykerlcyinnsvsnkpaiilsslvgnlvdqskqgivfneaswaqlrrellggalslpdpmyksdswlgrgepthiidylkfsiarpaidkeleafhnamahfwdpdlasyytffkeisdksrssallfttlknrigevekeygnkskdpypvrvnqvyekwcaitpeanydskvirllelsfladremntwallrastafklyyhkspkfvwqmagrqlayikaqmtsrpgegapalmtafmyaglmpdkkftkqyvarlegdgseypdpevyedgigftgngdy >7y7t_AB: title=QDE-1 IN COMPLEX WITH 12NT DNA TEMPLATE, ATP AND 3'-DGTP organism=Neurospora crassa DNA sequence DA(C4) DG(C5) DA(C6) DC(C7) DC(C8) DT(C9) DT(C10) DT(C11) DT(C12) chainA (348) ARG783 0 0 0 0 0 0 0 1 0 (647) LEU1082 0 0 0 7 0 0 0 0 0 (649) MET1084 0 0 3 0 0 0 0 0 0 chainB (928) PRO1378 0 0 0 0 0 0 0 0 1 prot.sequence apvaarlrniwpkfpkwlheaplavawevtrlfmhckvdledeslkydpswstardvtdiwktldafrpekppndvfvtamtgnfeskgsavvlsavldynpdnspaplylvklkplmfeqgcrltrrfgpdrffeilipsptspsvppvvskqaveeviqwltmgqhslvgrqwraffakdaiikervhffaetgitfrpepveqrtefkvsqmldwllqldnntwqphlklfsriqlglsktyaimtlephqirhhktdllspsgtgevmndgvgrmsrsvakrirdvlglgdvpsavqgrfgsakgmwvidvddtgdedwietypsqrkwecdfvdkhqrtlevRsvaselksaglnlqllpvledrardkvkmrqaigdrlindlqrqfseqkhalnrpvefrqwvyesyssratrvshgrvpflaglpdsqeetlnflmnsgfdpkkqkylqdiawdlqkrkcdtlksklnirvgrsayiymiadfwgvleenevhvgfsskfrdeeesftllsdcdvlvarspahfpsdiqrvravfkpelhslkdviifstkgdvplakklsggdydgdmawvcwdpeivdgfvnaemplepdlsrylkkdkttfkqlmashgtgsaakeqttydmiqksfhfalqpnfLgMctnykerlcyinnsvsnkpaiilsslvgnlvdqskqgivfneaswaqlrrellggalslpdpmyksdswlgrgepthiidylkfsiarpaidkeleafhnamahfwdpdlasyytffkeisdksrssallfttlknrigevekeygnkskdpypvrvnqvyekwcaitpeanydskvirllelsfladremntwallrastafklyyhkspkfvwqmagrqlayikaqmtsrpgegapalmtafmyaglmpdkkftkqyvarlegdgseypdpevyedgigftgngdy/arlrniwpkfpkwlheaplavawevtrlfmhckvdledeslglkydpswstardvtdiwkrldafrgkpfpekppndvfvtamtgnfeskgsavvlsavdypdnsptplylvklkplmfeqgcrltrrfgpdrffeilipsptstspsppvsqpgaveeviqwltmgqhslvgrqwraffakdapiikervhffaetgitfrpdepveqrtefkvsqmldwllqldnntwqphlklfsriqlglsktyaimtlephqirhhktdllspsgtgevmndgvgrmsrsvakrirdvlglgdvpsavqgrfgsakgmwvidvddtgdedwietypsqrkwecdfvdkhqrtlevrsvaselksaglnlqllpvledrardkvkmrqaigdrlindlqrqfseqkhalnrpvefrqwvyesyssratrvshgrvpflaglpdsqeetlnflmnsgfdpkkqkylqdiawdlqkrkcdtlksklnirvgrsayiymiadfwgvleenevhvgfsskfrdeeesftllsdcdvlvarspahfpsdiqrvravfkpelhslkdviifstkgdvplakklsggdydgdmawvcwdpeivdgfvnaemplepdlsrylkkdkttfkqlmashgtgsaakeqttydmiqksfhfalqpnflgmctnykerlcyinnsvsnkpaiilsslvgnlvdqskqgivfneaswaqlrrellggalslpdpmyksdswlgrgepthiidylkfsiarpaidkeleafhnamktedgahfwdpdlasyytffkeisdksrssallfttlknrigevekeygrlvknkkdpypvrvnqvyekwcaitpeamkvirllelsfladremntwallrastafklyyhkspkfvwqmagrqlayikaqmtsrpgegapalmtafmyaglmpdkkftkqyvarlegdgseyPdp >7y8r_I:P-loop_containing_nucleoside_triphosphate_hydrolases; title=THE NUCLEOSOME-BOUND HUMAN PBAF COMPLEX organism=? DNA sequence DA(X-4):DT(Y152) DT(X-3):DA(Y151) DT(X-2):DA(Y150) DC(X-1):DG(Y149) DC(X0):DG(Y148) DC(X1):DG(Y147) DC(Y2):DA(Y146) DG(X3):DC(Y145) DG(X4):DC(Y144) DA(X5):DT(Y143) DG(X6):DC(Y142) DA(X7):DT(Y141) DA(X8):DT(Y140) DT(X9):DA(Y139) DC(X10):DG(Y138) DC(X11):DG(Y137) DC(X12):DG(Y136) DG(X13):DC(Y135) DG(X14):DC(Y134) DT(X15):DA(Y133) DG(X16):DC(Y132) DC(X17):DG(Y131) DC(X18):DG(Y130) DG(X19):DC(Y129) DA(X20):DT(Y128) DG(X21):DC(Y127) DG(X22):DC(Y126) DC(X23):DG(Y125) DC(X24):DG(Y124) DG(X25):DC(Y123) DC(X26):DG(Y122) DT(X27):DA(Y121) DC(X28):DG(Y120) DA(X29):DT(Y119) DA(X30):DT(Y118) DT(X31):DA(Y117) DT(X32):DA(Y116) DG(X33):DC(Y115) DG(X34):DC(Y114) DT(X35):DA(Y113) DC(X36):DG(Y112) DG(X37):DC(Y111) DT(X38):DA(Y110) DA(X39):DT(Y109) DG(X40):DC(Y108) DA(X41):DT(Y107) DC(X42):DG(Y106) DA(X43):DT(Y105) DG(X44):DC(Y104) DC(X45):DG(Y103) DT(X46):DA(Y102) DC(X47):DG(Y101) DT(X48):DA(Y100) DA(X49):DT(Y99) DG(X50):DC(Y98) DC(X51):DG(Y97) DA(X52):DT(Y96) DC(X53):DG(Y95) DC(X54):DG(Y94) DG(X55):DC(Y93) DC(X56):DG(Y92) DT(X57):DA(Y91) DT(X58):DA(Y90) DA(X59):DT(Y89) DA(X61):DT(Y88) DC(X62):DG(Y86) DG(X63):DC(Y85) DC(X64):DG(Y84) DA(X65):DT(Y83) DC(X66):DG(Y82) DG(X67):DC(Y81) DT(X68):DA(Y80) DA(X69):DT(Y79) DC(X70):DG(Y78) DG(X71):DC(Y77) DC(X72):DG(Y76) DG(X73):DC(Y75) DC(X74):DG(Y74) DT(X75):DA(Y73) DG(X76):DC(Y72) DT(X77):DA(Y71) DC(X78):DG(Y70) DC(X79):DG(Y69) DC(X80):DG(Y68) DC(X81):DG(Y67) DC(X82):DG(Y66) DG(X83):DC(Y65) DC(X84):DG(Y64) DG(X85):DC(Y63) DT(X86):DA(Y62) DT(X87):DA(Y61) DT(X88):DA(Y60) DT(X89):DA(Y59) DA(X90):DT(Y58) DA(X91):DT(Y57) DC(X92):DG(Y56) DC(X93):DG(Y55) DG(X94):DC(Y54) DC(X95):DG(Y53) DC(X96):DG(Y52) DA(X97):DT(Y51) DA(X98):DT(Y50) DG(X99):DC(Y49) DG(X100):DC(Y48) DG(X101):DC(Y47) DG(X102):DC(Y46) DA(X103):DT(Y45) DT(X104):DA(Y44) DT(X105):DA(Y43) DA(X106):DT(Y42) DC(X107):DG(Y41) DT(X108):DA(Y40) DC(X109):DG(Y39) DC(X110):DG(Y38) DC(X111):DG(Y37) DT(X112):DA(Y36) DA(X113):DT(Y35) DG(X114):DC(Y34) DT(X115):DA(Y33) DC(X116):DG(Y32) DT(X117):DA(Y31) DC(X118):DG(Y30) DC(X119):DG(Y29) DA(X120):DT(Y28) DG(X121):DC(Y27) DG(X122):DC(Y26) DC(X123):DG(Y25) DA(X124):DT(Y24) DC(X125):DG(Y23) DG(X126):DC(Y22) DT(X127):DA(Y21) DG(X128):DC(Y20) DT(X129):DA(Y19) DC(X130):DG(Y18) DA(X131):DT(Y17) DC(X132):DG(Y16) DA(X133):DT(Y15) DT(X134):DA(Y14) DA(X135):DT(Y13) DT(X136):DA(Y12) DA(X137):DT(Y11) DT(X138):DA(Y10) DA(X139):DT(Y9) DC(X140):DG(Y8) DA(X141):DT(Y7) DT(X142):DA(Y6) DC(X143):DG(Y5) DC(X144):DG(Y4) DC(Y2):DA(Y3) DT(X147):DA(Y1) DT(X148):DA(Y0) DC(X149):DG(Y-1) DC(X150):DG(Y-2) DA(X151):DT(Y-3) DT(X153):DA(Y-5) DC(X155):DG(Y-7) DC(X156):DG(Y-8) DG(X157):DC(Y-9) DG(X158):DC(Y-10) chainI (468) MET1036 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (583) ARG1157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eilqereyrlqariahriqelenlpgslagdlrtkatielkalrllnfqrqlrqevvvcmrrdtaletalnakaykrskrqslreariteklekqqkieqerkrrqkhqeylnsilqhakdfkeyhrsvtgkiqkltkavatyhantereqkkeneriekermrrlmadqkkdkrlayllqqtdeyvanltelvrqsyyavahavtervdkqsalmvngvlkqyqikglewlvslynnnlngilademglgktiqtialitylmehkringpfliivplstlsnwayefdkwapsvvkvsykgspaarrafvpqlrsgkfnvllttyeyiikdkhilakirwkymivdeghrmknhhckltqvlnthyvaprrllltgtplqnklpelwallnfllptifkscstfeqwneeetiliirrlhkvlrpfllrrlkkeveaqlpekveyvikcdmsalqrvlyrhmqtlMntimqlrkicnhpymfqhieesfsehlvqgldlyrasgkfelldrilpklratnhkvllfcqmtslmtimedyfayrgfkylrldgttkaedrgmllktfnepgseyfifllstRagglglnlqsadtviifdsdwnphqdlqaqdrahrigqqnevrvlrlctvnsveekilaaakyklnvdqkviqagmfdqksssherraflqailehedevpddetvnqmiarheeefdlfmrmdldrrreearnpkrkprlmeedelps >7yc7_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=DARK, FULLY REDUCED STRUCTURE OF THE MMCPDII-DNA COMPLEX AS PRODUCED AT SWISSFEL organism=Methanosarcina mazei DNA sequence DT(D1):DA(C13) DG(D2):DC(C12) DC(D3):DG(C11) DG(D4):DC(C10) DC(D5):DG(C9) DG(D6):DC(C8) DA(D7):DC(C6) DA(D8):DG(C5) DG(D9):DG(C4) DC(D10):DC(C3) chainA (164) HIS161 0 0 0 0 0 0 1 0 0 0 (423) ARG429 0 0 0 0 0 0 33 3 8 0 (425) TRP431 0 0 0 0 0 18 5 0 0 0 (435) ARG441 0 0 0 0 0 3 0 0 0 0 (444) ARG450 0 0 0 2 0 0 0 0 0 0 prot.sequence prgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpetlsdvletgvkallperallknkdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >7ycm_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 100 PS SNAPSHOT. INCLUDES 100PS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS organism=Methanosarcina mazei DNA sequence DG(E4):DC(F11) DG(E5):DC(F10) DC(E6):DG(F9) DC(E8):DA(F8) DG(E9):DA(F7) DC(E10):DG(F6) DG(E11):DC(F5) DC(E12):DG(F4) DA(E13):DC(F3) chainB (166) HIS161 1 2 2 0 0 0 0 0 0 (401) ARG429 0 0 35 0 2 0 0 0 0 (403) TRP431 0 0 0 16 6 1 0 0 0 (413) ARG441 0 0 0 2 0 0 0 0 0 (422) ARG450 0 0 0 0 0 12 9 4 1 prot.sequence lvprgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >7ycp_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 250 PS SNAPSHOT. INCLUDES 250 PS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS organism=Methanosarcina mazei DNA sequence DC(C3):DG(D12) DG(C4):DC(D11) DG(C5):DC(D10) DC(C6):DG(D9) DC(C8):DA(D8) DG(C9):DA(D7) DC(C10):DG(D6) DG(C11):DC(D5) DC(C12):DG(D4) DA(C13):DC(D3) chainA (164) HIS161 0 0 1 0 0 0 0 0 0 0 (423) ARG429 0 0 0 14 2 7 0 0 0 0 (425) TRP431 0 0 0 0 17 3 1 0 0 0 (435) ARG441 0 0 0 0 3 0 0 0 0 0 (444) ARG450 0 0 0 0 0 0 1 0 0 0 prot.sequence prgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpetlsdvletgvkallperallknkdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >7ycr_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 450 PS SNAPSHOT. INCLUDES 450PS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS organism=Methanosarcina mazei DNA sequence DT(D1):DA(C13) DG(D2):DC(C12) DC(D3):DG(C11) DG(D4):DC(C10) DC(D5):DG(C9) DG(D6):DC(C8) DA(D7):DC(C6) DA(D8):DG(C5) DG(D9):DG(C4) DC(D10):DC(C3) chainA (423) ARG429 0 0 0 0 0 0 30 1 5 0 (425) TRP431 0 0 0 0 0 18 6 0 0 0 (435) ARG441 0 0 0 0 0 3 0 0 0 0 (444) ARG450 1 0 0 2 0 0 0 0 0 0 prot.sequence prgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaahtfrpklyallpefleefpelepnsvtpetlsdvletgvkallperallknkdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >7ycx_124j:Translation_proteins_SH3-like_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Eukaryotic_RPB5_N-terminal_domain;RPB5-like_RNA_polymerase_subunit; title=THE STRUCTURE OF INTAC-PEC COMPLEX organism=? DNA sequence DG(d1):DC(b48) DC(d2):DG(b47) DT(d3):DA(b46) DC(d4):DG(b45) DC(d5):DG(b44) DC(d6):DG(b43) DA(d7):DT(b42) DG(d8):DC(b41) DC(d9):DG(b40) DT(d10):DA(b39) DC(d11):DG(b38) DC(d12):DG(b37) DC(d13):DG(b36) DT(d14):DA(b35) DG(d15):DC(b34) DC(d16):DG(b33) DT(d17):DA(b32) DG(d18):DC(b31) DG(d19):DC(b30) DC(d20):DG(b29) DT(d21):DA(b28) DC(d22):DG(b27) DC(d23):DG(b26) DG(d24):DC(b25) DA(d25):DC(b24) DG(d26):DC(b14) DT(d27):DG(b13) DG(d28):DG(b12) DG(d29):DC(b11) DG(d30):DG(b10) DT(d31):DA(b9) DT(d32):DG(b8) DC(d33):DA(b7) DC(d34):DG(b6) DG(d35):DT(b5) DC(d36):DT(b4) chain1 (139) LYS149 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 10 0 (811) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (812) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (1346) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (1347) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain2 chain4 chainj prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlcKgknicehggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeipxxxxtspsysptspsysptspsysptxxxxxxxx/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqppryllkfeqiylskpthwapspmmpnearlrnltysaplyvditktvlqtqhqktfigkipimlrstycllngltdrdlcelneCpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekriKyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsGDdviigktvtlprrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqelliniTehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq/dpnlwtvkckigeerataislmrkfiayqftdtplqiksvvapehvkgyiyveaykqthvkqaiegvgnlrlgywnqqmvpikemtdvlkvvkkswvrlkrgiykddiaqvdyvepsqntislkmipridydrikappQrlfdaekirslggdvasdgdflifegnrysrkflfksfamsavitegvkptlselekfrehnfqpgdnvevcegelinlqgkilsvdgnkitimpkhedlkdmlefpaqelrkyfkmgdhvkviagrfegdtglivrveenfvilfsdLtmhelkvlprdlqlcsetasgvdvggqhewgelvqldpqtvgvivrleretfqvlnmygkvvtvrhqavtrkkdnrfavaldseqnnihvkdivkvidgphsgregeirhlfrsfaflhckklvenggmfvcktrhlvlaneligqtvrisqgpykgyigvvkdatestarvelhstcqtisvdrqrlttvgsr >7ycx_1:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THE STRUCTURE OF INTAC-PEC COMPLEX organism=? DNA sequence DG(d1):DC(b48) DC(d2):DG(b47) DT(d3):DA(b46) DC(d4):DG(b45) DC(d5):DG(b44) DC(d6):DG(b43) DA(d7):DT(b42) DG(d8):DC(b41) DC(d9):DG(b40) DT(d10):DA(b39) DC(d11):DG(b38) DC(d12):DG(b37) DC(d13):DG(b36) DT(d14):DA(b35) DG(d15):DC(b34) DC(d16):DG(b33) DT(d17):DA(b32) DG(d18):DC(b31) DG(d19):DC(b30) DC(d20):DG(b29) DT(d21):DA(b28) DC(d22):DG(b27) DC(d23):DG(b26) DG(d24):DC(b25) DA(d25):DC(b24) DG(d26):DC(b14) DT(d27):DG(b13) DG(d28):DG(b12) DG(d29):DC(b11) DG(d30):DG(b10) DT(d31):DA(b9) DT(d32):DG(b8) DC(d33):DA(b7) DC(d34):DG(b6) DG(d35):DT(b5) DC(d36):DT(b4) chain1 (139) LYS149 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 10 0 (811) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (812) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (1346) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (1347) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlcKgknicehggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeipxxxxtspsysptspsysptspsysptxxxxxxxx >7yd6_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 650 PS SNAPSHOT. INCLUDES 650PS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS organism=Methanosarcina mazei DNA sequence DT(F1):DA(E13) DG(F2):DC(E12) DC(F3):DG(E11) DG(F4):DC(E10) DC(F5):DG(E9) DG(F6):DC(E8) DA(F7):DC(E6) DA(F8):DG(E5) DG(F9):DG(E4) chainB (401) ARG429 0 0 0 0 0 0 27 2 8 (403) TRP431 0 0 0 0 0 15 6 0 0 (422) ARG450 2 7 8 8 0 0 0 0 0 prot.sequence lvprgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaahtfrpklyallpefleefpelepnsvtpdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkirymsyegckRkfdvklyiekys >7yd7_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 1 NS SNAPSHOT. INCLUDES 1 NS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS organism=Methanosarcina mazei DNA sequence DG(E4):DC(F11) DG(E5):DC(F10) DC(E6):DG(F9) DC(E8):DA(F8) DG(E9):DA(F7) DC(E10):DG(F6) DG(E11):DC(F5) DC(E12):DG(F4) DA(E13):DC(F3) chainB (166) HIS161 3 2 0 0 0 0 0 0 0 (401) ARG429 0 0 32 2 4 0 0 0 0 (403) TRP431 0 0 0 14 6 1 0 0 0 (413) ARG441 0 0 0 1 0 0 0 0 0 (422) ARG450 0 0 0 0 0 10 10 3 0 prot.sequence lvprgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >7yd8_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 2 NS SNAPSHOT. INCLUDES 2 NS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS organism=Methanosarcina mazei DNA sequence DT(D1):DA(C13) DG(D2):DC(C12) DC(D3):DG(C11) DG(D4):DC(C10) DC(D5):DG(C9) DG(D6):DC(C8) DA(D7):DC(C6) DA(D8):DG(C5) DG(D9):DG(C4) DC(D10):DC(C3) chainA (164) HIS161 0 0 0 0 0 0 1 0 0 0 (423) ARG429 0 0 0 0 0 0 29 5 5 0 (425) TRP431 0 0 0 0 0 18 5 0 0 0 (435) ARG441 0 0 0 0 0 2 0 0 0 0 (444) ARG450 1 0 0 2 0 0 0 0 0 0 prot.sequence prgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpetlsdvletgvkallperallknkdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >7ydw_A: title=CRYSTAL STRUCTURE OF THE MPND-DNA COMPLEX organism=Mus musculus DNA sequence DT(F1):DA(E10) DT(F2):DA(E9) DT(F3):DA(E8) DT(F4):DA(E7) DT(F5):DA(E5) DT(F7):DA(E4) DT(F8):DA(E3) DT(F10):DA(E2) chainA ( 2) ALA64 0 0 0 0 0 1 0 0 prot.sequence rAvtlrvllkdellepgegvlsiyylgrkftgdlqldgrivwqetgqvfnspsawathckklvnpakksgwasvkykgqkldkykaawlrrh >7ydw_AC: title=CRYSTAL STRUCTURE OF THE MPND-DNA COMPLEX organism=Mus musculus DNA sequence DT(F1):DA(E10) DT(F2):DA(E9) DT(F3):DA(E8) DT(F4):DA(E7) DT(F5):DA(E5) DT(F7):DA(E4) DT(F8):DA(E3) DT(F10):DA(E2) chainA ( 2) ALA64 0 0 0 0 0 1 0 0 chainC ( 2) ALA64 0 1 0 0 0 0 0 0 prot.sequence rAvtlrvllkdellepgegvlsiyylgrkftgdlqldgrivwqetgqvfnspsawathckklvnpakksgwasvkykgqkldkykaawlrrh/rAvtlrvllkdellepgegvlsiyylgrkftgdlqldgrivwqetgqvfnspsawathckklvnpakksgwasvkykgqkldkykaawlrrh >7ydz_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: DARK STATE AS COLLECTED IN SACLA organism=Methanosarcina mazei DNA sequence DC(F3):DA(E13) DG(F4):DC(E12) DC(F5):DG(E11) DG(F6):DC(E10) DA(F7):DG(E9) DA(F8):DC(E8) DG(F9):DC(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DA(F13):DT(E2) chainB (164) HIS161 0 0 0 0 0 0 0 2 1 0 0 (399) ARG429 0 0 0 0 8 2 27 0 0 0 0 (401) TRP431 0 0 0 3 6 16 0 0 0 0 0 (411) ARG441 0 0 0 0 0 2 0 0 0 0 0 (420) ARG450 1 3 8 10 0 0 0 0 0 0 0 prot.sequence lvprgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdeflgirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >7ye0_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=DF-SFX MMCPDII-DNA COMPLEX: STEADY STATE OXIDIZED COMPLEX organism=Methanosarcina mazei DNA sequence DC(D3):DA(C13) DG(D4):DC(C12) DC(D5):DG(C11) DG(D6):DC(C10) DA(D7):DG(C9) DA(D8):DC(C8) DG(D9):DC(C6) DC(D10):DG(C5) DC(D11):DG(C4) DG(D12):DC(C3) DA(D13):DT(C2) DT(D14):DA(C1) chainA (422) ARG429 0 0 0 0 7 1 33 0 0 0 0 0 (424) TRP431 0 0 0 2 6 19 0 0 0 0 0 0 (434) ARG441 0 0 0 0 0 3 0 0 0 0 0 0 (443) ARG450 0 0 5 13 0 0 0 0 0 0 0 0 prot.sequence vprgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaahtfrpklyallpefleefpelepnsvtetlsdvletgvkallperallkkdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >7ye1_A:Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=THE CRYO-EM STRUCTURE OF C. CRESCENTUS GCRA-TACUP organism=? DNA sequence DG(I-11):DC(H11) DC(I-10):DG(H10) DA(I-9):DT(H9) DT(I-8):DA(H8) DC(I-7):DG(H7) DC(I-6):DG(H6) DG(I-5):DC(H5) DT(I-4):DA(H4) DG(I-3):DC(H3) DA(I-2):DT(H2) DG(I-1):DG(H1) DT(I0):DT(H0) DC(I1):DC(H-1) DG(I2):DG(H-2) DA(I3):DA(H-3) DG(I4):DG(H-4) DG(I5):DG(H-5) DG(I6):DG(H-6) DT(I7):DT(H-7) DA(I8):DA(H-8) DA(I9):DA(H-9) DT(I10):DT(H-10) DA(I11):DA(H-11) DA(I12):DT(H-12) DG(I13):DC(H-13) DC(I14):DG(H-14) DA(I15):DT(H-15) DG(I16):DC(H-16) DG(I17):DC(H-17) DG(I18):DC(H-18) 6MA(I19):DT(H-19) DT(I20):DA(H-20) DT(I21):6MA(H-21) DC(I22):DG(H-22) DG(I23):DC(H-23) DC(I24):DG(H-24) DC(I25):DG(H-25) DC(I26):DG(H-26) DG(I27):DC(H-27) DG(I28):DC(H-28) DG(I29):DC(H-29) DT(I30):DA(H-30) DG(I31):DC(H-31) DT(I32):DA(H-32) DC(I33):DG(H-33) DA(I34):DT(H-34) DA(I35):DT(H-35) DC(I36):DG(H-36) DT(I37):DA(H-37) DC(I38):DG(H-38) DT(I39):DA(H-39) DT(I40):DA(H-40) DT(I41):DA(H-41) DT(I42):DA(H-42) DT(I43):DA(H-43) DT(I44):DA(H-44) DT(I45):DA(H-45) chainA (243) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 prot.sequence rnwnelirpekpqietgadatrkarivaeplergfgvtlgnalrrvllsslqgaavtaiqidgvvhefsslegvredvvdivlnikqlavrmhaegpkrmtlratgpgpvtagqietpadieilnpdhvlctlddgasvrmeftvnngkgyvpadrnrpedapigliavdalyspvkrvayrveptrldydklilevetngavtpvdavayaarilqdqlqifitfenpallkkvdelelsvRsanclkndnivyigdliqkteaemlrtpnfgrkslneikevlagmglhlgmdvpnwppeniedl >7ye1_ACDFG:Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=THE CRYO-EM STRUCTURE OF C. CRESCENTUS GCRA-TACUP organism=? DNA sequence DG(I-11):DC(H11) DC(I-10):DG(H10) DA(I-9):DT(H9) DT(I-8):DA(H8) DC(I-7):DG(H7) DC(I-6):DG(H6) DG(I-5):DC(H5) DT(I-4):DA(H4) DG(I-3):DC(H3) DA(I-2):DT(H2) DG(I-1):DG(H1) DT(I0):DT(H0) DC(I1):DC(H-1) DG(I2):DG(H-2) DA(I3):DA(H-3) DG(I4):DG(H-4) DG(I5):DG(H-5) DG(I6):DG(H-6) DT(I7):DT(H-7) DA(I8):DA(H-8) DA(I9):DA(H-9) DT(I10):DT(H-10) DA(I11):DA(H-11) DA(I12):DT(H-12) DG(I13):DC(H-13) DC(I14):DG(H-14) DA(I15):DT(H-15) DG(I16):DC(H-16) DG(I17):DC(H-17) DG(I18):DC(H-18) 6MA(I19):DT(H-19) DT(I20):DA(H-20) DT(I21):6MA(H-21) DC(I22):DG(H-22) DG(I23):DC(H-23) DC(I24):DG(H-24) DC(I25):DG(H-25) DC(I26):DG(H-26) DG(I27):DC(H-27) DG(I28):DC(H-28) DG(I29):DC(H-29) DT(I30):DA(H-30) DG(I31):DC(H-31) DT(I32):DA(H-32) DC(I33):DG(H-33) DA(I34):DT(H-34) DA(I35):DT(H-35) DC(I36):DG(H-36) DT(I37):DA(H-37) DC(I38):DG(H-38) DT(I39):DA(H-39) DT(I40):DA(H-40) DT(I41):DA(H-41) DT(I42):DA(H-42) DT(I43):DA(H-43) DT(I44):DA(H-44) DT(I45):DA(H-45) chainA (243) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 chainC (155) ARG157 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) TRP189 0 0 0 0 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ASP205 0 0 0 0 0 0 0 0 0 0 0 5 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (362) GLU382 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (433) ILE453 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) ARG459 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (492) GLU512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (496) SER516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (529) GLU549 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (530) ARG550 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (535) VAL555 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (198) MET214 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) ALA321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA428 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (766) THR786 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (767) ALA787 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) VAL116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) LEU120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LEU129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (268) ASN423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) ARG425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (271) LEU426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) LYS433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) ARG437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) PHE441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) GLU460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) SER468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) THR469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) TYR470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) THR472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) TRP474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (322) GLN477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) THR480 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) VAL494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) HIS495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) ILE497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ILE500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (346) ASN501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (349) VAL504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) LYS542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) GLU543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (390) ILE545 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) THR549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ILE551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (398) ASP553 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) GLU554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (402) SER557 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) PHE562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (469) ARG624 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (470) GLU625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 14 12 0 0 0 0 0 0 0 0 0 0 (471) ARG626 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 (473) ARG628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 34) ASN34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ILE37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) HIS41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rnwnelirpekpqietgadatrkarivaeplergfgvtlgnalrrvllsslqgaavtaiqidgvvhefsslegvredvvdivlnikqlavrmhaegpkrmtlratgpgpvtagqietpadieilnpdhvlctlddgasvrmeftvnngkgyvpadrnrpedapigliavdalyspvkrvayrveptrldydklilevetngavtpvdavayaarilqdqlqifitfenpallkkvdelelsvRsanclkndnivyigdliqkteaemlrtpnfgrkslneikevlagmglhlgmdvpnwppeniedl/qsftgkkrirksfgripeavqmpnlievqrssyeqflqretrpglrrdegveavfksvfpikdfneravleyvsyefeepkydveeciqrdmtfaaplkvklrlivfeteeetgarsvkdikeqdvymgdiplmtdkgtfivngtervivsqmhRspgvffdhdkgkthasgkllfaarvipyrgsWldfefdakdivyvriDrRrklpattflyalgmdgeeilttfydvvpfekrsggwatpykperwrgvkpefplvdadtgeevapagtkitarqakkfadgglktlltgrylardaeiyaeagdeldvtsiqaladdvldidhvtvgaymrntlrvdknairedalfdiyrvmrpgEpptveaaeamfkslffdaerydlssvgrvkmnmrleqdvsdevrilrkedvlavlkvlvglrdgrgeiddIdnlgnRrvrsvgellenqyrvgllrmeraikermssvdidtvmphdlinakpaaaavrEffgSsqlsqFmdqtnplseithkrrlsalgpggltrERagfeVrdvhpthygricpietpegpniglinslatharvnkygfiespyrrvkdgkpqdevvymsameeskhviaqsnikvaegeivedlvpgringeptllqketvdlmdvsprqvvsvaaalipflenddanralmgsnmqrqavplvqsdaplvgtgmeavvardsgavviakrtgvveqidgtrivirateetdparsgvdiyrmskfqrsnqstcinqrplvkvgdrivagdiiadgpstelgelalgrnalvafmpwngynfedsiliserivrddvftsihieefevmardtklgpeeitrdipnvgeealrnldeagivaigaevqpgdilvgkvtpkgespmtpeekllraifgekasdvrdtslrlppgvagtivdvrvfnrhgvdkderalaieraeidrlgkdrddefailnrnisgrlkelligklaqvasglwwqialedekamgeleslrrlfdenrkrldrrfedkvdklqrgdelppgvmkmvkvfvavkrklqpgdkmagrhgnkgvisrilpiedmpfladgthvdvvlnplgvpsrmnvgqifethlgwacanlgkqitnlledwqqggqkqalverlteeelpdteeglvelarnlgkgvpiatpvfdgarmddieghlemagvnksgqsilfdgltgeqfkrpvtvgyiymlklhhlvddkiharsigpyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvagrtkvyesivrgddtfeagipesfnvlvkemrslglnvelen/tfdqirislaspekirswsfgeikkpetinyrtfkperdglfcarifgptkdyeclcgkykrmkykgiicekcgvevtlarvrrermghielaspvahiwflkslpsriammldmplkdiervlyfeyyivtepgltplkqhqllseddymraqeeygddsftaeigaeaiqnllkaidlekeaerlreelsgtvsdMkqkkfskrlkileafqesgnrpewmvltvvpvippelrplvpldggrfatsdlndlyrrvinrnnrlkrlielrapdiiirnekrmlqesvdalfdngrrgrvitgAnkrplksladmlkgkqgrfrqnllgkrvdysgrsvivvgpelklhecglpkkmalelfkpfiyarldakglsgtvkqskrmvereqpqvwdileevirehpvllnrAptlhrlgiqafepkliegkaiqlhplvcaafnadfdgdqmavhvplsleaqlearvlmmstnnilspangrpiivpsqdivlglyylsvardgepgegkifadlgeieaamdagvvslhakikarhtemtpegvllrkvidttpgrmkiaallphhpqighrliekaltkkeignlidivyrhcgqkatvifadkvmglgfkeaakagisfgkddiiipvrktaiveetrklaeeyeqqyitkgekynkvvdawakatdrvademmaelqmkhkdengrekeinaiymmahsgargsqaqmkqlggmrglmakpsgeiietpivsnfkegltvqeyfnsthgarkgladtalkTAnsgyltrrlvdvaqdciiveedcgttkgitlravveggdvlvslgsrvlgrftaedvkdpgtgelvvpadtyideniadaieaavvqsvkvrsvltceakigvcgacygrdlargtpvnigeavgviaaqsigepgtqlttgglprvaelfearrpkdcaviaemdgrvefgkdyknkrrikitpdkhiavhdgdyitkgeyiidgnpdphdilrilgvealanflvdeiqevyrlqgvpindkhietivrqmlqkveilepgdtglikgdhldkpefdkeqekaiarggrpavtqpvllgitkaslqtksfisaasfqettrvlteasvhgktdtleglkenvivgrlipagtgsylrslqrvaakrdeqlaqqre/drtddpVRmyLremgsvelLsregeiaiakrieagrdtmirglcesaltfeaimvwreelgtgrillrevidlegtyaaivsamegelregvmaildaiasefeafrklqdklvgsrlkgedlsdadrkayeglsatiiqhlktlklnnnriealveqlyainkrliglegrllrladsygisrgeflkayfgselnptwseqvkamgvrwtkfvendsqsvtdirseiaalatetgvpiddyrrivqtvqkgerearqakkemveaNlRLvisiakKytnRglqFldliqegniglmkavdkfEyRrgykfSTYaTWWirQaiTRsiadqartiripVHmIetINkiVrtsrqmlheigreptpeelaeklamplekvrkvlkiaKEpIsleTpIgDEedShlgdFiedknailpidaaiqsnlretttrvlasltpreervlrmrfgigmntdhtleevgqqfsvtRERiRqieakalrklkhpsrsrklrsfld/mswtdervstlkklwldglsasqiakqlggvtrNavigkvHRlglspgsatvltlgahmckwpigdpssegftfcgrrssegpycveharvayqpqqtkkksg >7ye2_ACDF:Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit; title=THE CRYO-EM STRUCTURE OF C. CRESCENTUS GCRA-TACDOWN organism=? DNA sequence DG(H-47):DC(I47) DC(H-46):DG(I46) DC(H-45):DG(I45) DC(H-44):DG(I44) DT(H-43):DA(I43) DT(H-42):DA(I42) DA(H-41):DT(I41) DG(H-40):DC(I40) DC(H-39):DG(I39) DC(H-38):DG(I38) DC(H-37):DG(I37) DC(H-36):DG(I36) DT(H-35):DA(I35) DT(H-34):DA(I34) DG(H-33):DC(I33) DA(H-32):DT(I32) DC(H-31):DG(I31) DA(H-30):DT(I30) DG(H-29):DC(I29) DG(H-28):DC(I28) DC(H-27):DG(I27) DG(H-26):DC(I26) DG(H-25):DC(I25) DG(H-24):DC(I24) DA(H-23):DT(I23) DA(H-22):DT(I22) DA(H-21):DT(I21) DC(H-20):DG(I20) DA(H-19):DT(I19) DT(H-18):DA(I18) DC(H-17):DG(I17) DG(H-16):DC(I16) DT(H-15):DA(I15) DG(H-14):DC(I14) DT(H-13):DA(I13) DT(H-12):DA(I12) DA(H-11):DT(I11) DA(H-10):DT(I10) DC(H-9):DG(I9) DC(H-8):DG(I8) DT(H-7):DA(I7) DT(H-6):DA(I6) DC(H-5):DG(I5) DG(H-4):DC(I4) DA(H-3):DT(I3) DT(H-2):DA(I2) DT(H-1):DA(I1) DA(H0):DT(I0) DA(H1):DT(I-1) DG(H2):DC(I-2) 6MA(H3):DT(I-3) DG(H4):DC(I-4) DT(H5):6MA(I-5) DC(H6):DG(I-6) DG(H7):DC(I-7) DC(H8):DG(I-8) DT(H9):DA(I-9) DG(H10):DC(I-10) 6MA(H11):DT(I-11) DG(H12):DC(I-12) DT(H13):6MA(I-13) DC(H14):DG(I-14) DG(H15):DC(I-15) DC(H16):DG(I-16) DG(H17):DC(I-17) DA(H18):DT(I-18) chainA chainC ( 65) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) ARG149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) ARG157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) TRP189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ASP205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (205) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ARG402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (425) ILE453 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (431) ARG459 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (457) GLU485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (460) SER488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (476) LYS504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (484) GLU512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (488) SER516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (518) LEU546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (521) GLU549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (522) ARG550 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (526) GLU554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (527) VAL555 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1235) MET1287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (105) LEU121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (196) MET214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (243) ARG261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) ALA321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) ASN322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ARG324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) LYS336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ARG354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (410) ALA428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) PRO429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (413) LEU431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (764) THR786 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) VAL116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) LEU120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LEU129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (268) ASN423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (271) LEU426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (273) ILE428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) LYS432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ASN436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) ARG437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) PHE441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) PHE459 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) TYR470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) TRP474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) ARG476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (322) GLN477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) ARG488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) VAL494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) HIS495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (346) ASN501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (349) VAL504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (350) ARG505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (353) ARG508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) GLU543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) THR549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ILE551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rnwnelirpekpqietgadatrkarivaeplergfgvtlgnalrrvllsslqgaavtaiqidgvvhefsslegvredvvdivlnikqlavrmhaegpkrmtlratgpgpvtagqietpadieilnpdhvlctlddgasvrmeftvnngkgyvpadrnrpedapigliavdalyspvkrvayrveptldydklilevetngavtpvdavayaarilqdqlqifitfenpallkkvdelelsvrsanclkndnivyigdliqkteaemlrtpnfgrkslneikevlagmglhlgmdvpnwppeniedl/qsftgkkrirksfgripeavqmpnlievqrssyeqflqretrpglrrdegveavfksvfpikdfNeravleyvsyefeepkydveeciqrdmtfaaplkvklrlivfeteeetgarsvkdikeqdvymgdiplmtdkgtfivngteRvivsqmhRspgvffdhdkgkthasgkllfaarvipyrgSWldfefdakdivyvriDrRrklpattflyalgmdgeeilttfydvvpfekrsggwatpykperwrgvkpefplvdadtgeevapagtkitarqakkfadgglktlltgrylardaeiyaeagdeldvtsiqaladtvgaymrntlrvdknairedalfdiyrvmrpgepptveaaeamfkslffdaeRydlssvgrvkmnmrleqdvsdevrilrkedvlavlkvlvglrdgrgeiddIdnlgnRrvrsvgellenqyrvgllrmeraikErmSsvdidtvmphdlinaKpaaaavrEffgSsqlsqfmdqtnplseithkrrlsalgpggLtrERagfEVrdvhpthygricpietpegpniglinslatharvnkygfiespyrrvkdgkpqdevvymsameeskhviaqsnikvaegeivedlvpgringeptllqketvdlmdvsprqvvsvaaalipflenddanralmgsnmqrqavplvqsdaplvgtgmeavvardsgavviakrtgvveqidgtrivirateetdparsgvdiyrmskfqrsnqstcinqrplvkvgdrivagdiiadgpstelgelalgrnalvafmpwngynfedsiliserivrddvftsihieefevmardtklgpeeitrdipnvgeealrnldeagivaigaevqpgdilvgkvtpkgespmtpeekllraifgekasdvrdtslrlppgvagtivdvrvfnrhgvdkderalaieraeidrlgkdrddefailnrnisgrlkelligklaqvasglwwqialedekamgeleslrrlfdenrkrldrrfedkvdklqrgdelppgvmkmvkvfvavkrklqpgdkmagrhgnkgvisrilpiedmpfladgthvdvvlnplgvpsrmnvgqifethlgwacanlgkqitnlledwqqggqkqalverlteelpdteeglvelarnlgkgvpiatpvfdgarmddieghlemagvnksgqsilfdgltgeqfkrpvtvgyiymlklhhlvddkiharsigpyslvtqqplggkaqfggqrfgeMevwaleaygaaytlqemltvksddvagrtkvyesivrgddtfeagipesfnvlvkemrslglnvelen/tfdqirislaspekirswsfgeikkpetinyrtfkperdglfcarifgptkdyeclcgkykrmkykgiicekcgvevtlarvrrermghielaspvahiwflksLpsriammldmplkdiervlyfeyyivtepgplkqhqllseddymraqeeygddsftaeigaeaiqnllkaidlekeaerlreelsgtvsdMkqkkfskrlkileafqesgnrpewmvltvvpvippelrplvpldggRfatsdlndlyrrvinrnnrlkrlielrapdiiirnekrmlqesvdalfdngrrgrvitgANkRplksladmlkgKqgrfrqnllgkrvdysgRsvivvgpelklhecglpkkmalelfkpfiyarldakglsgtvkqskrmvereqpqvwdileevirehpvllnrAPtLhrlgiqafepkliegkaiqlhplvcaafnadfdgdqmavhvplsleaqlearvlmmstnnilspangrpiivpsqdivlglyylsvardgepgegkifadlgeieaamdagvvslhakikarhtemtpegvllrkvidttpgrmkiaallphhpqighrliekaltkkeignlidivyrhcgqkatvifadkvmglgfkeaakagisfgkddiiipvrktaiveetrklaeeyeqqyitkgekynkvvdawakatdrvademmaelqmkhkdengrekeinaiymmahsgargsqaqmkqlggmrglmakpsgeiietpivsnfkegltvqeyfnsthgarkgladtalkTansgyltrrlvdvaqdciiveedcgttkgitlravveggdvlvslgsrvlgrftaedvkdpgtgelvvpadtyideniadaieaavvqsvkvrsvltceakigvcgacygrdlargtpvnigeavgviaaqsigepgtqltitgglprvaelfearrpkdcaviaemdgrvefgkdyknkrrikitpdkhiavhdgdyitkgeyiidgnpdphdilrilgvealanflvdeiqevyrlqgvpindkhietivrqmlqkveilepgdtglikgdhldkpefdkeqekaiarpavtqpvllgitkaslqtksfisaasfqettrvlteasvhgktdtleglkenvivgrlipagtgsylrslqrvaakrdeqlaqqre/drtddpVRmyLremgsvelLsregEiaiakrieagrdtmirglcesaltfeaimvwreelgtgrillrevidlegtyaaivsamegelregvmaildaiasefeafrklqdklvgsrlkgedlsdadrkayeglsatiiqhlktlklnnnriealveqlyainkrliglegrllrladsygisrgeflkayfgselnptwseqvkamgvrwtkfvendsqsvtdirseiaalatetgvpiddyrrivqtvqkgerearqakkemveaNlrLvIsiaKkytNRglqFldliqegniglmkavdkFeyrrgykfstYatWWiRQaitRsiadqaRtiripVHmietiNkiVRtsRqmlheigreptpeelaeklamplekvrkvlkiakEpisleTpIgdeedshlgdfiedknailpidaaiqsnlretttrvlasltpreervlrmrfgigmntdhtleevgqqfsvtrerirqieakalrklkhpsrsrklrsfld >7ye2_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=THE CRYO-EM STRUCTURE OF C. CRESCENTUS GCRA-TACDOWN organism=? DNA sequence DG(H-47):DC(I47) DC(H-46):DG(I46) DC(H-45):DG(I45) DC(H-44):DG(I44) DT(H-43):DA(I43) DT(H-42):DA(I42) DA(H-41):DT(I41) DG(H-40):DC(I40) DC(H-39):DG(I39) DC(H-38):DG(I38) DC(H-37):DG(I37) DC(H-36):DG(I36) DT(H-35):DA(I35) DT(H-34):DA(I34) DG(H-33):DC(I33) DA(H-32):DT(I32) DC(H-31):DG(I31) DA(H-30):DT(I30) DG(H-29):DC(I29) DG(H-28):DC(I28) DC(H-27):DG(I27) DG(H-26):DC(I26) DG(H-25):DC(I25) DG(H-24):DC(I24) DA(H-23):DT(I23) DA(H-22):DT(I22) DA(H-21):DT(I21) DC(H-20):DG(I20) DA(H-19):DT(I19) DT(H-18):DA(I18) DC(H-17):DG(I17) DG(H-16):DC(I16) DT(H-15):DA(I15) DG(H-14):DC(I14) DT(H-13):DA(I13) DT(H-12):DA(I12) DA(H-11):DT(I11) DA(H-10):DT(I10) DC(H-9):DG(I9) DC(H-8):DG(I8) DT(H-7):DA(I7) DT(H-6):DA(I6) DC(H-5):DG(I5) DG(H-4):DC(I4) DA(H-3):DT(I3) DT(H-2):DA(I2) DT(H-1):DA(I1) DA(H0):DT(I0) DA(H1):DT(I-1) DG(H2):DC(I-2) 6MA(H3):DT(I-3) DG(H4):DC(I-4) DT(H5):6MA(I-5) DC(H6):DG(I-6) DG(H7):DC(I-7) DC(H8):DG(I-8) DT(H9):DA(I-9) DG(H10):DC(I-10) 6MA(H11):DT(I-11) DG(H12):DC(I-12) DT(H13):6MA(I-13) DC(H14):DG(I-14) DG(H15):DC(I-15) DC(H16):DG(I-16) DG(H17):DC(I-17) DA(H18):DT(I-18) chainF ( 7) VAL116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) LEU120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LEU129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (268) ASN423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (271) LEU426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (273) ILE428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (277) LYS432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ASN436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) ARG437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) PHE441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) PHE459 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) TYR470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) TRP474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) ARG476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (322) GLN477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) ARG481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) ARG488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) VAL494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) HIS495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (346) ASN501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (349) VAL504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (350) ARG505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (353) ARG508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) GLU543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) THR549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) ILE551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence drtddpVRmyLremgsvelLsregEiaiakrieagrdtmirglcesaltfeaimvwreelgtgrillrevidlegtyaaivsamegelregvmaildaiasefeafrklqdklvgsrlkgedlsdadrkayeglsatiiqhlktlklnnnriealveqlyainkrliglegrllrladsygisrgeflkayfgselnptwseqvkamgvrwtkfvendsqsvtdirseiaalatetgvpiddyrrivqtvqkgerearqakkemveaNlrLvIsiaKkytNRglqFldliqegniglmkavdkFeyrrgykfstYatWWiRQaitRsiadqaRtiripVHmietiNkiVRtsRqmlheigreptpeelaeklamplekvrkvlkiakEpisleTpIgdeedshlgdfiedknailpidaaiqsnlretttrvlasltpreervlrmrfgigmntdhtleevgqqfsvtrerirqieakalrklkhpsrsrklrsfld >7yeb_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 3.35 NS SNAPSHOT. INCLUDES 3.35 NS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS organism=Methanosarcina mazei DNA sequence DG(E4):DC(F11) DG(E5):DC(F10) DC(E6):DG(F9) DT(E7):DA(F8) DT(E8):DA(F7) DC(E9):DG(F6) DG(E10):DC(F5) DC(E11):DG(F4) DG(E12):DC(F3) DC(E13):DG(F2) DA(E14):DT(F1) chainB (166) HIS161 2 2 0 0 0 0 0 0 0 0 0 (228) ARG256 0 0 0 5 5 0 0 0 0 0 0 (229) ASN257 0 0 0 0 8 0 0 0 0 0 0 (273) GLU301 0 0 0 13 2 0 0 0 0 0 0 (277) TRP305 0 0 0 49 0 0 0 0 0 0 0 (351) MET379 0 0 0 0 9 0 0 0 0 0 0 (393) TRP421 0 0 0 2 12 0 0 0 0 0 0 (401) ARG429 0 0 64 2 5 0 0 0 0 0 0 (403) TRP431 0 0 0 0 7 18 0 0 0 0 0 (413) ARG441 0 0 0 0 0 1 0 0 0 0 0 prot.sequence lvprgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpdplfepwhfepgekaakkvmesfiadrldsygalRNdptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkiRymsyegckkfdvklyiekys >7yec_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 6 NS SNAPSHOT. INCLUDES 6 NS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS organism=Methanosarcina mazei DNA sequence DT(D1):DA(C13) DG(D2):DC(C12) DC(D3):DG(C11) DG(D4):DC(C10) DC(D5):DG(C9) DG(D6):DC(C8) DA(D7):DC(C6) DA(D8):DG(C5) DG(D9):DG(C4) DC(D10):DC(C3) chainA (423) ARG429 0 0 0 0 0 0 28 0 4 0 (425) TRP431 0 0 0 0 0 12 4 0 0 0 (435) ARG441 0 0 0 0 0 1 0 0 0 0 (444) ARG450 0 0 1 3 0 0 0 0 0 0 prot.sequence prgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaahtfrpklyallpefleefpelepnsvtpetlsdvletgvkallperallknkdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >7yee_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 10 NS SNAPSHOT. INCLUDES 10 NS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS. COLLECTED AT SWISSFEL organism=Methanosarcina mazei DNA sequence DT(F1):DA(E14) DG(F2):DC(E13) DC(F3):DG(E12) DG(F4):DC(E11) DC(F5):DG(E10) DG(F6):DC(E9) DA(F7):DT(E8) DA(F8):DT(E7) DG(F9):DC(E6) DC(F10):DG(E5) DC(F11):DG(E4) chainB (166) HIS161 0 0 0 0 0 0 0 0 0 0 1 (228) ARG256 0 0 0 0 0 0 4 3 0 0 0 (229) ASN257 0 0 0 0 0 0 4 0 0 0 0 (273) GLU301 0 0 0 0 0 0 2 11 0 0 0 (277) TRP305 0 0 0 0 0 0 0 49 0 0 0 (351) MET379 0 0 0 0 0 0 12 0 0 0 0 (393) TRP421 0 0 0 0 0 0 8 0 0 0 0 (401) ARG429 0 0 0 0 0 0 0 2 37 0 0 (403) TRP431 0 0 0 0 0 26 6 0 0 0 0 (413) ARG441 0 0 0 0 0 4 0 0 0 0 0 (422) ARG450 3 3 6 4 0 0 0 0 0 0 0 prot.sequence lvprgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpdplfepwhfepgekaakkvmesfiadrldsygalRNdptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >7yei_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 10 NS TIME-POINT COLLECTED IN SACLA. INCLUDES 10 NS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS organism=Methanosarcina mazei DNA sequence DT(F1):DA(E14) DG(F2):DC(E13) DC(F3):DG(E12) DG(F4):DC(E11) DC(F5):DG(E10) DG(F6):DC(E9) DA(F7):DT(E8) DA(F8):DT(E7) DG(F9):DC(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) chainB (166) HIS161 0 0 0 0 0 0 0 0 0 2 5 0 (228) ARG256 0 0 0 0 0 0 9 1 0 0 0 0 (272) ASP300 0 0 0 0 0 0 0 5 0 0 0 0 (273) GLU301 0 0 0 0 0 0 3 16 0 0 0 0 (277) TRP305 0 0 0 0 0 0 0 60 0 0 0 0 (351) MET379 0 0 0 0 0 0 8 0 0 0 0 0 (393) TRP421 0 0 0 0 0 0 5 5 0 0 0 0 (401) ARG429 0 0 0 0 0 0 8 7 35 0 0 0 (403) TRP431 0 0 0 0 0 24 7 0 0 0 0 0 (422) ARG450 2 8 8 10 0 0 0 0 0 0 0 0 prot.sequence lvprgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpdplfepwhfepgekaakkvmesfiadrldsygalRndptknmlsnlspylhfgqissqrvvlevekaesnpgskkaflDEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkirymsyegckRkfdvklyiekys >7yej_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 100 NS TIME-POINT COLLECTED IN SACLA. INCLUDES 100 NS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS organism=Methanosarcina mazei DNA sequence DC(E3):DG(F12) DG(E4):DC(F11) DG(E5):DC(F10) DC(E6):DG(F9) DT(E7):DA(F8) DT(E8):DA(F7) DC(E9):DG(F6) DG(E10):DC(F5) DC(E11):DG(F4) DG(E12):DC(F3) DC(E13):DG(F2) DA(E14):DT(F1) chainB (164) HIS161 0 1 1 0 0 0 0 0 0 0 0 0 (226) ARG256 0 0 0 0 4 9 0 0 0 0 0 0 (227) ASN257 0 0 0 0 0 7 0 0 0 0 0 0 (271) GLU301 0 0 0 0 12 5 0 0 0 0 0 0 (275) TRP305 0 0 0 0 44 0 0 0 0 0 0 0 (349) MET379 0 0 0 0 0 8 0 0 0 0 0 0 (391) TRP421 0 0 0 0 0 8 0 0 0 0 0 0 (399) ARG429 0 0 0 60 2 7 0 0 0 0 0 0 (401) TRP431 0 0 0 0 0 8 20 0 0 0 0 0 (411) ARG441 0 0 0 0 0 0 1 0 0 0 0 0 (420) ARG450 0 0 0 0 0 0 0 0 13 8 5 1 prot.sequence lvprgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdeflgirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpdplfepwhfepgekaakkvmesfiadrldsygalRNdptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >7yek_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 500 NS TIME-POINT COLLECTED IN SACLA. INCLUDES 500 NS, DARK, AND EXTRAPOLATED STRUCTURE FACTORS organism=Methanosarcina mazei DNA sequence DT(D1):DA(C14) DG(D2):DC(C13) DC(D3):DG(C12) DG(D4):DC(C11) DC(D5):DG(C10) DG(D6):DC(C9) DA(D7):DT(C8) DA(D8):DT(C7) DG(D9):DC(C6) DC(D10):DG(C5) DC(D11):DG(C4) DG(D12):DC(C3) DA(D13):DT(C2) chainA (164) HIS161 0 0 0 0 0 0 0 0 1 1 1 0 0 (250) ARG256 0 0 0 0 0 0 9 1 0 0 0 0 0 (251) ASN257 0 0 0 0 0 0 4 0 0 0 0 0 0 (295) GLU301 0 0 0 0 0 0 2 12 0 0 0 0 0 (299) TRP305 0 0 0 0 0 0 0 51 0 0 0 0 0 (373) MET379 0 0 0 0 0 0 15 0 0 0 0 0 0 (415) TRP421 0 0 0 0 0 0 10 3 0 0 0 0 0 (423) ARG429 0 0 0 0 0 0 8 2 31 0 0 0 0 (425) TRP431 0 0 0 0 0 36 6 0 0 0 0 0 0 (435) ARG441 0 0 0 0 0 4 0 0 0 0 0 0 0 (444) ARG450 1 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence prgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpetlsdvletgvkallperallknkdplfepwhfepgekaakkvmesfiadrldsygalRNdptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >7yel_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 25 US TIME-POINT COLLECTED IN SACLA. INCLUDES 25 US, DARK, AND EXTRAPOLATED STRUCTURE FACTORS organism=Methanosarcina mazei DNA sequence DC(F3):DA(E13) DG(F4):DC(E12) DC(F5):DG(E11) DG(F6):DC(E10) DA(F7):DG(E9) DA(F8):DC(E8) DG(F9):DC(E6) DC(F10):DG(E5) DC(F11):DG(E4) DG(F12):DC(E3) DA(F13):DT(E2) chainB (164) HIS161 0 0 0 0 0 0 0 2 0 0 0 (399) ARG429 0 0 0 0 7 13 27 0 0 0 0 (401) TRP431 0 0 0 1 8 16 0 0 0 0 0 (411) ARG441 0 0 0 0 0 1 0 0 0 0 0 (420) ARG450 1 3 7 12 0 0 0 0 0 0 0 prot.sequence lvprgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdeflgirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >7yem_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TR-SFX MMCPDII-DNA COMPLEX: 200 US TIME-POINT COLLECTED IN SACLA. INCLUDES 200 US, DARK, AND EXTRAPOLATED STRUCTURE FACTORS organism=Methanosarcina mazei DNA sequence DT(C2):DT(D14) DC(C3):DG(D12) DG(C4):DC(D11) DC(C6):DG(D9) DT(C7):DA(D8) DT(C8):DA(D7) DC(C9):DG(D6) DC(C11):DC(D5) DG(C12):DC(D3) DC(C13):DT(D1) chainA (164) HIS161 0 0 1 12 0 0 0 0 0 0 (250) ARG256 0 0 0 0 0 14 0 0 0 0 (251) ASN257 0 0 0 0 0 3 0 0 0 0 (294) ASP300 0 0 0 0 2 0 0 0 0 0 (295) GLU301 0 0 0 0 2 10 0 0 0 0 (299) TRP305 0 0 0 0 4 3 0 0 0 0 (373) MET379 0 0 0 0 0 11 0 0 0 0 (423) ARG429 0 0 0 14 0 0 0 0 0 0 (425) TRP431 0 0 0 0 0 7 14 0 0 0 (435) ARG441 0 0 0 0 0 0 13 0 0 0 prot.sequence prgshmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpetlsdvletgvkallperallknkdplfepwhfepgekaakkvmesfiadrldsygalRNdptknmlsnlspylhfgqissqrvvlevekaesnpgskkaflDEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrMywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckrkfdvklyiekys >7yho_A:DNA-glycosylase; title=CRYOEM STRUCTURE OF ARABIDOPSIS ROS1 IN COMPLEX WITH TG MISMATCH DSDNA AT 3.3 ANGSTROMS RESOLUTION organism=? DNA sequence DT(C17):DA(B24) DT(C18):DA(B23) DC(C19):DG(B22) DA(C20):DT(B21) DG(C21):DC(B20) DA(C22):DT(B19) DC(C23):DG(B18) DT(C24):DA(B17) DC(C25):DG(B16) DT(C26):DG(B15) DG(C27):DC(B14) DG(C28):DC(B13) DA(C29):DT(B12) DT(C30):DA(B11) DC(C31):DG(B10) DA(C32):DT(B9) DC(C33):DG(B8) DT(C34):DA(B7) DC(C35):DG(B6) DA(C36):DT(B5) DG(C37):DC(B4) DC(C38):DG(B3) DT(C39):DA(B2) chainA ( 47) THR606 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) ASN608 0 0 0 0 0 0 0 0 0 3 34 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) VAL609 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ASP611 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU613 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ARG903 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) MET905 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 (102) LYS908 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 (151) CYS957 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) LEU961 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ASN971 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) ILE1031 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) THR1299 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) TYR1300 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kwweeernvfrgradsfiarmhlvqgdrrftpwkgsvvdsvvgvflTqNVsDhLsssafmslasqfpvpfvstmdtvdwkairaadvkevaetiksRgMnhKlaeriqgfldrlvndhgsidlewlrdvppdkakeyllsfnglglksveCvrlLtlhhlafpvNtnvgriavrlgwvemypmlesiqkylwprlckldqktlyelhyqmItfgkvfctkskpncnacpmkgecrhfasafhrvyelpdehpllaqlekrepddpcsyllaiwgtilipcrtamrgsfplngTYfqvnevfadhasslnpinvpprrtvyfgtsvptifkglstekiqacfwkgyvcvrgfdrktrgpkpl >7yhp_A:DNA-glycosylase; title=CRYOEM STRUCTURE OF ARABIDOPSIS ROS1 IN COMPLEX WITH 5MC-DSDNA AT 3.1 ANGSTROMS RESOLUTION organism=? DNA sequence DT(C17):DA(B24) DT(C18):DA(B23) DC(C19):DG(B22) DA(C20):DT(B21) DG(C21):DC(B20) DA(C22):DT(B19) DC(C23):DG(B18) DT(C24):DA(B17) DC(C25):DG(B16) 5CM(C26):DG(B15) DG(C27):DC(B14) DG(C28):DC(B13) DA(C29):DT(B12) DT(C30):DA(B11) DC(C31):DG(B10) DA(C32):DT(B9) DC(C33):DG(B8) chainA ( 47) THR606 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 48) GLN607 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 49) ASN608 0 0 0 0 0 0 0 0 18 5 20 0 0 0 0 0 0 ( 50) VAL609 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 51) SER610 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 52) ASP611 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 ( 54) LEU613 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 96) ARG903 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 98) MET905 0 0 0 0 0 0 0 0 0 16 6 0 0 0 0 0 0 (101) LYS908 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 (150) CYS957 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (154) LEU961 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (164) ASN971 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (166) ASN973 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (200) HIS1027 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (204) ILE1031 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 (291) LEU1296 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (294) THR1299 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (295) TYR1300 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 prot.sequence kwweeernvfrgradsfiarmhlvqgdrrftpwkgsvvdsvvgvfltQNVSdhLsssafmslasqfpvprstmdtvdwkairaadvkevaetiksRgMnhKlaeriqgfldrlvndhgsidlewlrdvppdkakeyllsfnglglksvecvrlltlhhlafpvntnvgriavrlgwvesiqkylwprlckldqktlyelhyqmitfgkvfctkskpncnacpmkgecrhfasafsqlrtehrvyelpdehpllaqlekrepddpcsyllaiwvrgtilipcrtamrgsfplngtyfqvnevfadhasslnpinvpreliwelprrtvyfgtsvptifkglstekiqacfwkgyvcvrgfdrktrgpkpliarlh >7yhq_A:DNA-glycosylase; title=CRYOEM STRUCTURE OF ARABIDOPSIS ROS1 IN COMPLEX WITH A COVALENT- LINKED REACTION INTERMEDIATE AT 3.9 ANGSTROMS RESOLUTION organism=? DNA sequence DT(C17):DA(B24) DT(C18):DA(B23) DC(C19):DG(B22) DA(C20):DT(B21) DG(C21):DC(B20) DA(C22):DT(B19) DC(C23):DG(B18) DT(C24):DA(B17) DC(C25):DG(B16) PED(C26):DG(B15) DG(C27):DC(B14) DG(C28):DC(B13) DA(C29):DT(B12) DT(C30):DA(B11) DC(C31):DG(B10) DA(C32):DT(B9) DC(C33):DG(B8) chainA ( 49) ASN608 0 0 0 0 0 0 0 0 2 0 22 0 0 0 0 0 0 ( 50) VAL609 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 51) SER610 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 98) ARG903 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (100) MET905 0 0 0 0 0 0 0 0 0 11 11 0 0 0 0 0 0 (103) LYS908 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 prot.sequence kwweeernvfrgradsfiarmhlvqgdrrftpwkgsvvdsvvgvfltqNVSdhlsssafmslasqfpvpfvrstmdtvdwkairaadvkevaetiksRgMnhKlaeriqgfldrlvndhgsidlewlrdvppdkakeyllsfnglglksvecvrlltlhhlafpvdtnvgriavrlgwvplqplpeslqlhllemypmlesiqkylwprlckldqktlyelhyqmitfgkvfctkskpncnacpmkgecrhfasafsqlrtehrvyelpdehpllaqlekrepddpcsyllaiwvrgtilipcrtamrgsfplngtyfqvnevfadhasslnpinvpiwelprrtvyfgtsvptifkglstekiqacfwkgyvcvrgfdrktrgpkpliarlh >7yhs_AI: title=STRUCTURE OF CSY-ACRIF4-DSDNA organism=? DNA sequence DA(O1):DT(N44) DG(O2):DC(N43) DC(O3):DG(N42) DA(O4):DT(N41) DG(O5):DC(N40) DC(O6):DG(N39) DT(O7):DA(N38) DG(O8):DC(N37) DC(O9):DG(N36) DA(O10):DT(N35) DC(O11):DG(N34) DC(O12):DG(N33) chainA (101) ASN111 0 0 0 0 0 0 0 0 0 5 3 0 (102) ALA112 0 0 0 0 0 0 0 0 0 0 1 3 (103) ALA113 0 0 0 0 0 0 0 0 0 0 2 0 (237) LYS247 0 0 0 0 0 0 0 0 0 0 0 7 (239) GLN249 0 0 0 0 0 0 0 0 0 0 0 3 (240) ASN250 0 0 0 0 0 0 0 0 0 0 5 10 chainI prot.sequence qelrqfiesfiqerlqgkldklhpdeddkrqtllathrreawladaarrvgqlqlvthtlkpihpdargsnlhslpqapgqpglagshelgdrlvsdvvgNAAaldvfkflslqyqgknllnwltedsaeavqalsdnaeqarewrqafigitavkgapashslakqlyfplpgsgyhllaplfptslvhhvhallrearfgdaakaarearsrqeswphgfseypnlaiqkfggtKpQNisqlnserygenwllpslpphwqrqdqrapirhssvfehdfgrspevsrltrtlqrllaktrhnnftirryraqlvgqicdealqyaarlrelepgwsatpgcqlhdaeqlwldplraqtdetflqrrlrgdwpaevgnrfanwlnravssdsqilgspeaaqwsqelskeltmfkeileder/lstasvlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisnrlktkdrdpakldasiqspnlqtvdvanlpsdadtlkvrftlrvlggagtPSAcndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqelilkkgqksktLySVrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggvfge >7yhs_CDEFGH: title=STRUCTURE OF CSY-ACRIF4-DSDNA organism=? DNA sequence DC(N43) DG(N42) DT(N41) DC(N40) DG(N39) DA(N38) DC(N37) DG(N36) DT(N35) DG(N34) DG(N33) DA(N32) DA(N31) DG(N30) DT(N29) DG(N28) DC(N27) DC(N26) DG(N25) DC(N24) DC(N23) DC(N22) DG(N21) DA(N20) DA(N19) DC(N18) DT(N17) DA(N16) DC(N15) DA(N14) DG(N13) DG(N12) DC(N11) DG(N10) DC(N9) DA(N6) DG(N7) DA(N8):DC(N9) chainC ( 6) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (290) VAL354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 chainD ( 6) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (321) VAL354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 chainE ( 83) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) THR94 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 7) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 70) PRO93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 71) ASN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 72) LEU95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 17 ( 73) GLN96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 (331) VAL354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 chainG ( 7) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 ( 70) PRO93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 71) ASN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 72) LEU95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 19 0 0 0 0 0 0 0 0 ( 73) GLN96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 (229) LEU252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) SER262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (331) VAL354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 6) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) PRO93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LEU95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) LEU252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) SER262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (322) VAL354 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lstasVlaferkldpsdalmsagawaqrdasqewpavtvreksqtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqelktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge/lstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisnrlktkdrdpakldasiqspnlqtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliksktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge/vtdpeallllprlsiqnanaisspltwgfpspgaftgfvhalqrrvgisldieldgvgivchrfeaqisqpagkrtkvfnltRnplnrdgsTaaiveegrahlevslllgvhgdglddhpaqeiarqvqeqagamrlaggsilpwcnerfpapnaellmlggsdeqrrknqrrltrrllpgfalvsreallqqhletlrttlpeattldalldlcrinfepwqvrdkpgwlvpipagynalsplylpgevrnardretplrfvenlfglgewlsphrvaalsdllwyhhaepdkglyrwstprfv/ilstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisNrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqelildkgdkkgqksktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge/ilstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisNrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLdkgdkkgqkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfgea/lstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisNrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge >7yhs_H: title=STRUCTURE OF CSY-ACRIF4-DSDNA organism=? DNA sequence DC(N43) DG(N42) DT(N41) DC(N40) DG(N39) DA(N38) DC(N37) DG(N36) DT(N35) DG(N34) DG(N33) DA(N32) DA(N31) DG(N30) DT(N29) DG(N28) DC(N27) DC(N26) DG(N25) DC(N24) DC(N23) DC(N22) DG(N21) DA(N20) DA(N19) DC(N18) DT(N17) DA(N16) DC(N15) DA(N14) DG(N13) DG(N12) DC(N11) DG(N10) DC(N9) DA(N6) DG(N7) DA(N8):DC(N9) chainH ( 6) VAL30 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASN74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) PRO93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LEU95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) LEU252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) SER262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (322) VAL354 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lstasVlaferkldpsdalmsagawaqrdasqewpavtvreksvrgtisNrlktkdrdpakldasiqsPNLQtvdvanlpsdadtlkvrftlrvlggagtpsacndaayrdkllqtvatyvneqgfaelarryahnlanarflwrnrvgaeavevrinhirqgevartwrfdalaiglrdfkadaeldalaeliasglsgsghvllevvafarigdgqevfpsqeliLkSktlysvrdaaaihsqkignalrtidtwypdedglgpiavepygsvtsqgkayrqpkqkldfytlldnwvlrdeapaveqqhyvianlirggVfge >7yoj_A: title=STRUCTURE OF CASPI WITH GUIDE RNA AND TARGET DNA organism=? DNA sequence DC(C1):DG(D30) DG(C2):DC(D29) DG(C3):DC(D28) DG(C4):DC(D27) DA(C5):DT(D26) DT(C6):DA(D25) DG(C7):DC(D24) DC(C8):DG(D23) DC(C9):DG(D22) DC(C10):DG(D21) chainA (133) GLN133 0 0 0 0 0 0 0 0 0 30 (268) ASP268 0 0 0 0 0 0 7 6 0 0 (389) THR389 0 0 0 0 0 0 0 0 0 1 (390) ARG390 0 0 0 0 0 0 0 3 15 2 (392) ARG392 0 0 0 0 0 0 5 6 3 0 prot.sequence makatkevkskrvealrqvayqrlerlerkaqkigahlrkpgkaadlqslhyllhkveveyhdiarnlekdptwtpkpkmrrekraivpesgpaaplpttakgepgrpanrhipppvpldsaripedqqsmgQgsggrswcsapfvevklpptqwsnvrekllkfrieddadivrrwaeakfgsietardglrasaeigtspdvwrsfisraisngkkdfepllsldddeltadataervvrrwhqidwvgrmldsiletvpsgvskDtfrsrvesrlktfhssvnsfelkkrkdgtverkrkhtnpqfpylspsavsidpdvvtmeavellqmqpeerfakdpndangrmrlrvlqaelgkarrealgrrgekappwsgrkvfrgttTRkReaclvwdkeaqadglyfalvmsggpkiddkrfvymdgqplqsdwqlhngvagkakscramplilkhdflrwyhrhiknhdvnaplekrcvhtttqfvfvepdekkglqprlfirpvfkfydpvyevpdshsidkkpdcryligiargvnypyraavydcetnsiiadkfvdgrkadwerirnelayhqrrrdllrnsrassaaiqreiraiarirkrerglnkvetvesiarlvdwaeenlgkcnycfvladlssnlnlgrnnrvkhiaaikealinqmrkrgyrfkksgkvdgvreesawytsavapsgwwakkeevdgawkadktrplarkigsyycceeidglhlrgvlkglgrakrlvlqsddpsaptrrrgfgselfwdpyctelcghafpqgvvldadfigafnialrplvreelgkkakavdladrhqtlnptvalrcgvtayefvevggdprgglrkillnpaeavi >7yoz_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF HUMAN SUBNUCLEOSOME (INTERMEDIATE FORM) organism=? DNA sequence DT(J-59):DA(I59) DG(J-58):DC(I58) DA(J-57):DT(I57) DC(J-56):DG(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DG(J-53):DC(I53) DT(J-52):DA(I52) DG(J-51):DC(I51) DC(J-50):DG(I50) DC(J-49):DG(I49) DT(J-48):DA(I48) DG(J-47):DC(I47) DG(J-46):DC(I46) DA(J-45):DT(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DC(J-42):DG(I42) DT(J-41):DA(I41) DA(J-40):DT(I40) DG(J-39):DC(I39) DG(J-38):DC(I38) DG(J-37):DC(I37) DA(J-36):DT(I36) DG(J-35):DC(I35) DT(J-34):DA(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DT(J-31):DA(I31) DC(J-30):DG(I30) DC(J-29):DG(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DT(J-25):DA(I25) DG(J-24):DC(I24) DG(J-23):DC(I23) DC(J-22):DG(I22) DG(J-21):DC(I21) DG(J-20):DC(I20) DT(J-19):DA(I19) DT(J-18):DA(I18) DA(J-17):DT(I17) DA(J-16):DT(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DC(J-13):DG(I13) DG(J-12):DC(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DG(J-9):DC(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DA(J-3):DT(I3) DG(J-2):DC(I2) DC(J-1):DG(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DA(J4):DT(I-4) DC(J5):DG(I-5) DG(J6):DC(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DC(J9):DG(I-9) DG(J10):DC(I-10) DT(J11):DA(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DA(J14):DT(I-14) DA(J15):DT(I-15) DG(J16):DC(I-16) DC(J17):DG(I-17) DG(J18):DC(I-18) DG(J19):DC(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DC(J22):DG(I-22) DT(J23):DA(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DT(J29):DA(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DC(J32):DG(I-32) DT(J33):DA(I-33) DA(J34):DT(I-34) DC(J35):DG(I-35) DG(J36):DC(I-36) DA(J37):DT(I-37) DC(J38):DG(I-38) DC(J39):DG(I-39) DA(J40):DT(I-40) DA(J41):DT(I-41) DT(J42):DA(I-42) DT(J43):DA(I-43) DG(J44):DC(I-44) DA(J45):DT(I-45) DG(J46):DC(I-46) DC(J47):DG(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DC(J50):DG(I-50) DC(J51):DG(I-51) DT(J52):DA(I-52) DC(J53):DG(I-53) DG(J54):DC(I-54) DG(J55):DC(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DC(J58):DG(I-58) DC(J59):DG(I-59) DG(J60):DC(I-60) DG(J61):DC(I-61) chainA ( 25) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE chainF chainG chainH prot.sequence ellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrt/ellirklpfqrlvreiaqdfktDlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/niqgitkpairrlarrggvkriSgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr/ellirklpfqrlvreiaqdfktDlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/dniqgitkpairrlarrggvkrIsgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqg/ellirklpfqrlvreiaqdfktDlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkrIsgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr >7yoz_B:Histone-fold; title=CRYO-EM STRUCTURE OF HUMAN SUBNUCLEOSOME (INTERMEDIATE FORM) organism=? DNA sequence DC(I-61):DG(J61) DC(I-60):DG(J60) DG(I-59):DC(J59) DG(I-58):DC(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DC(I-55):DG(J55) DC(I-54):DG(J54) DG(I-53):DC(J53) DA(I-52):DT(J52) DG(I-51):DC(J51) DG(I-50):DC(J50) DC(I-49):DG(J49) DC(I-48):DG(J48) DG(I-47):DC(J47) DC(I-46):DG(J46) DT(I-45):DA(J45) DC(I-44):DG(J44) DA(I-43):DT(J43) DA(I-42):DT(J42) DT(I-41):DA(J41) DT(I-40):DA(J40) DG(I-39):DC(J39) DG(I-38):DC(J38) DT(I-37):DA(J37) DC(I-36):DG(J36) DG(I-35):DC(J35) DT(I-34):DA(J34) DA(I-33):DT(J33) DG(I-32):DC(J32) DA(I-31):DT(J31) DC(I-30):DG(J30) DA(I-29):DT(J29) DG(I-28):DC(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DA(I-23):DT(J23) DG(I-22):DC(J22) DC(I-21):DG(J21) DA(I-20):DT(J20) DC(I-19):DG(J19) DC(I-18):DG(J18) DG(I-17):DC(J17) DC(I-16):DG(J16) DT(I-15):DA(J15) DT(I-14):DA(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DA(I-11):DT(J11) DC(I-10):DG(J10) DG(I-9):DC(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DC(I-6):DG(J6) DG(I-5):DC(J5) DT(I-4):DA(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DG(I1):DC(J-1) DC(I2):DG(J-2) DT(I3):DA(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DC(I9):DG(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DC(I12):DG(J-12) DG(I13):DC(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DT(I16):DA(J-16) DT(I17):DA(J-17) DA(I18):DT(J-18) DA(I19):DT(J-19) DC(I20):DG(J-20) DC(I21):DG(J-21) DG(I22):DC(J-22) DC(I23):DG(J-23) DC(I24):DG(J-24) DA(I25):DT(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DG(I29):DC(J-29) DG(I30):DC(J-30) DA(I31):DT(J-31) DT(I32):DA(J-32) DT(I33):DA(J-33) DA(I34):DT(J-34) DC(I35):DG(J-35) DT(I36):DA(J-36) DC(I37):DG(J-37) DC(I38):DG(J-38) DC(I39):DG(J-39) DT(I40):DA(J-40) DA(I41):DT(J-41) DG(I42):DC(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DT(I45):DA(J-45) DC(I46):DG(J-46) DC(I47):DG(J-47) DA(I48):DT(J-48) DG(I49):DC(J-49) DG(I50):DC(J-50) DC(I51):DG(J-51) DA(I52):DT(J-52) DC(I53):DG(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DG(I56):DC(J-56) DT(I57):DA(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrt >7yp9_CD: title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI PAUSED COMPLEX OF TRANSCRIPTION TERMINATION (TTC-PAUSE) organism=? DNA sequence DT(F-12):DA(G12) DA(F-11):DT(G11) DC(F-10):DG(G10) DG(F-9):DG(G9) DG(F-8):DG(G8) DA(F-7):DA(G7) DA(F-6):DA(G6) DA(F-5):DA(G5) DA(F-4):DA(G4) DA(F-3):DA(G3) DT(F-2):DT(G2) DA(F-1):DA(G1) DA(F0):DA(G0) DC(F1):DG(G-1) DA(F2):DT(G-2) DC(F3):DG(G-3) DG(F4):DC(G-4) DG(F5):DC(G-5) DC(F6):DG(G-6) DG(F7):DC(G-7) DA(F8):DT(G-8) DA(F9):DT(G-9) DT(F10):DA(G-10) DA(F11):DT(G-11) DC(F12):DG(G-12) chainC ( 54) SER55 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) VAL56 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ARG180 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 (185) ASP199 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 (373) ASP393 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ARG465 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) VAL469 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (488) SER508 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (522) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0 0 0 0 0 0 0 0 0 (547) PRO567 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1242 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 26) GLU42 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG47 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) LEU120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (187) THR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 (228) VAL253 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) THR262 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ASP264 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) ASP267 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) ARG270 0 0 24 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) ARG271 0 0 0 16 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) ASN274 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) ARG314 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (751) THR790 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 (752) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrSVfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlvikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyRgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmptreaaeslfenlffseDrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfRvglVrveravkerlslgdldtlmpqdminakpisaavkeffgSsqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegPniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemyagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsreeitadiplskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftdkraleieemqlkqakkdlseelqileaqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddKmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginiele/fdaikialaspdmirswsfgevkkpEtinyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflksLpsrigllldmplrdiervlyfesyvviqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplVpTsDlnDlyRRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyevaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtsslvvldsaertaggkdlrpalkivpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7yp9_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI PAUSED COMPLEX OF TRANSCRIPTION TERMINATION (TTC-PAUSE) organism=? DNA sequence DG(G-12):DC(F12) DT(G-11):DA(F11) DA(G-10):DT(F10) DT(G-9):DA(F9) DT(G-8):DA(F8) DC(G-7):DG(F7) DG(G-6):DC(F6) DC(G-5):DG(F5) DC(G-4):DG(F4) DG(G-3):DC(F3) DT(G-2):DA(F2) DG(G-1):DC(F1) DA(G0):DA(F0) DA(G1):DA(F-1) DT(G2):DT(F-2) DA(G3):DA(F-3) DA(G4):DA(F-4) DA(G5):DA(F-5) DA(G6):DA(F-6) DA(G7):DA(F-7) DG(G8):DG(F-8) DG(G9):DG(F-9) DG(G10):DC(F-10) DT(G11):DA(F-11) DA(G12):DT(F-12) chainD ( 26) GLU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 31) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (104) LEU120 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) THR212 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) VAL253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (230) THR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (232) ASP264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (235) ASP267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 (238) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 12 0 0 (239) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 16 0 0 0 (242) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (282) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 8 0 0 0 0 0 0 0 (751) THR790 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 (752) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fdaikialaspdmirswsfgevkkpEtinyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflksLpsrigllldmplrdiervlyfesyvviqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplVpTsDlnDlyRRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyevaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtsslvvldsaertaggkdlrpalkivpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7ypa_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI HAIRPIN-NUCLEATION COMPLEX OF TRANSCRIPTION TERMINATION (TTC-HAIRPIN) organism=? DNA sequence DG(G-14):DC(F14) DG(G-13):DC(F13) DG(G-12):DC(F12) DT(G-11):DA(F11) DA(G-10):DT(F10) DT(G-9):DA(F9) DT(G-8):DA(F8) DC(G-7):DG(F7) DG(G-6):DC(F6) DC(G-5):DG(F5) DC(G-4):DG(F4) DG(G-3):DC(F3) DT(G-2):DA(F2) DG(G-1):DC(F1) DA(G0):DA(F0) DA(G1):DA(F-1) DT(G2):DT(F-2) DA(G3):DA(F-3) DA(G4):DA(F-4) DA(G5):DA(F-5) DA(G6):DA(F-6) DA(G7):DA(F-7) DG(G8):DG(F-8) DG(G9):DG(F-9) DG(G10):DC(F-10) DT(G11):DA(F-11) DA(G12):DT(F-12) DC(G13):DG(F-13) chainC ( 53) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (173) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 (176) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 (386) ASP393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (387) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (458) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (462) VAL469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 (466) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (535) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrSvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyRgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffseDRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfRvglVrveRavkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >7ypa_CD: title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI HAIRPIN-NUCLEATION COMPLEX OF TRANSCRIPTION TERMINATION (TTC-HAIRPIN) organism=? DNA sequence DG(G-14):DC(F14) DG(G-13):DC(F13) DG(G-12):DC(F12) DT(G-11):DA(F11) DA(G-10):DT(F10) DT(G-9):DA(F9) DT(G-8):DA(F8) DC(G-7):DG(F7) DG(G-6):DC(F6) DC(G-5):DG(F5) DC(G-4):DG(F4) DG(G-3):DC(F3) DT(G-2):DA(F2) DG(G-1):DC(F1) DA(G0):DA(F0) DA(G1):DA(F-1) DT(G2):DT(F-2) DA(G3):DA(F-3) DA(G4):DA(F-4) DA(G5):DA(F-5) DA(G6):DA(F-6) DA(G7):DA(F-7) DG(G8):DG(F-8) DG(G9):DG(F-9) DG(G10):DC(F-10) DT(G11):DA(F-11) DA(G12):DT(F-12) DC(G13):DG(F-13) chainC ( 53) SER55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (173) ARG180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 (176) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 (386) ASP393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (387) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (458) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (462) VAL469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 (466) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (535) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (237) VAL253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (239) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (245) ALA261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (254) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 (258) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (298) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 (774) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrSvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyRgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffseDRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfRvglVrveRavkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/fdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplVpLdggrfAtsdlndlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrm >7ypb_CD: title=CRYO-EM STRUCTURE OF ESCHERICHIA COLI RELEASE COMPLEX OF TRANSCRIPTION TERMINATION (TTC-RELEASE) organism=? DNA sequence DT(F-5):DG(G10) DT(F-4):DG(G9) DT(F-3):DG(G8) DA(F-2):DA(G7) DT(F-1):DA(G6) DT(F0):DA(G5) DC(F1):DG(G-1) DA(F2):DT(G-2) DC(F3):DG(G-3) DG(F4):DC(G-4) DG(F5):DC(G-5) DC(F6):DG(G-6) DG(F7):DC(G-7) DA(F8):DT(G-8) DA(F9):DT(G-9) DT(F10):DA(G-10) DA(F11):DT(G-11) DC(F12):DG(G-12) DC(F13):DG(G-13) DC(F14):DG(G-14) chainC (180) SER182 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgSWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravleekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdlEQeceqlreelnetnseTKrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygKleLrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteYekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqglsslvvlgkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlariptgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >7ypo_ABCD: title=CRYO-EM STRUCTURE OF BACULOVIRUS LEF-3 IN COMPLEX WITH SSDNA organism=? DNA sequence DA(Q1) DA(Q2) DA(Q3) DA(Q4) DA(Q5) DA(Q6) DA(Q7) DA(Q8) DA(Q9) DA(Q10) DA(Q11) DA(Q12) DA(Q13) DA(Q14) DA(Q15) DA(Q16) DA(Q17) DA(Q18) DA(Q19) DA(Q20) DA(Q21) DA(Q22) DA(Q23) DA(Q24) DA(Q25) DA(Q26) DA(Q27) DA(Q28) chainA (259) TYR311 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) ARG313 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) ASN361 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) VAL363 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (178) ALA230 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) TYR311 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) ARG313 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) ASN361 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) VAL363 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (178) ALA230 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) TYR311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 (261) ARG313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 (309) ASN361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (311) VAL363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 chainD ( 20) ASN68 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ALA230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (259) TYR311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 (261) ARG313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 (309) ASN361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (311) VAL363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 prot.sequence lrtlnvkgqlltkttmsinnedyylfkflvnnksidyygtqtqffslinnktyelvlqysrkklliksyeqcedmtvcksvtfqefcaneiksllakflygfkiygssnvyklvfvillednngtingvqvemmsdfkrlsgafknhvienendlfdcmykseekyfnlyrikcnhnannykslslssnsqlerletddsmfeyefqydytvnisrsnkiiqkhrvtgnftserniyqnsdrfvisydtanekiktsiYnRmenaesktdydtsitlkdvtlsqlnsliesnlvqvdvylvtdpnnvkNnViagitkieidgtyepl/lrtlnvkgqlltkttmsinnedyylfkflvnnksidyygtqtqffslinnktyelvlqysrkklliksyeqcedmtvcksvtfqefcaneiksllakflygfkiygssnvyklvfvillednngtingvqvemmsdfkrlsgafknhvienendlfdcmykseekyfnlyrikcnhnAnnykslslssnsqlerletddsmfeyefqydytvnisrsnkiiqkhrvtgnftserniyqnsdrfvisydtanekiktsiYnRmenaesktdydtsitlkdvtlsqlnsliesnlvqvdvylvtdpnnvkNnViagitkieidgtyepl/lrtlnvkgqlltkttmsinnedyylfkflvnnksidyygtqtqffslinnktyelvlqysrkklliksyeqcedmtvcksvtfqefcaneiksllakflygfkiygssnvyklvfvillednngtingvqvemmsdfkrlsgafknhvienendlfdcmykseekyfnlyrikcnhnAnnykslslssnsqlerletddsmfeyefqydytvnisrsnkiiqkhrvtgnftserniyqnsdrfvisydtanekiktsiYnRmenaesktdydtsitlkdvtlsqlnsliesnlvqvdvylvtdpnnvkNnViagitkieidgtyepl/lrtlnvkgqlltkttmsinNedyylfkflvnnksidyygtqtqffslinnktyelvlqysrkklliksyeqcedmtvcksvtfqefcaneiksllakflygfkiygssnvyklvfvillednngtingvqvemmsdfkrlsgafknhvienendlfdcmykseekyfnlyrikcnhnAnnykslslssnsqlerletddsmfeyefqydytvnisrsnkiiqkhrvtgnftserniyqnsdrfvisydtanekiktsiYnRmenaesktdydtsitlkdvtlsqlnsliesnlvqvdvylvtdpnnvkNnViagitkieidgtyepl >7ypo_D: title=CRYO-EM STRUCTURE OF BACULOVIRUS LEF-3 IN COMPLEX WITH SSDNA organism=? DNA sequence DA(Q1) DA(Q2) DA(Q3) DA(Q4) DA(Q5) DA(Q6) DA(Q7) DA(Q8) DA(Q9) DA(Q10) DA(Q11) DA(Q12) DA(Q13) DA(Q14) DA(Q15) DA(Q16) DA(Q17) DA(Q18) DA(Q19) DA(Q20) DA(Q21) DA(Q22) DA(Q23) DA(Q24) DA(Q25) DA(Q26) DA(Q27) DA(Q28) chainD ( 20) ASN68 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (178) ALA230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 (259) TYR311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 (261) ARG313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 (309) ASN361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (311) VAL363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 prot.sequence lrtlnvkgqlltkttmsinNedyylfkflvnnksidyygtqtqffslinnktyelvlqysrkklliksyeqcedmtvcksvtfqefcaneiksllakflygfkiygssnvyklvfvillednngtingvqvemmsdfkrlsgafknhvienendlfdcmykseekyfnlyrikcnhnAnnykslslssnsqlerletddsmfeyefqydytvnisrsnkiiqkhrvtgnftserniyqnsdrfvisydtanekiktsiYnRmenaesktdydtsitlkdvtlsqlnsliesnlvqvdvylvtdpnnvkNnViagitkieidgtyepl >7ypq_A: title=CRYO-EM STRUCTURE OF ONE BACULOVIRUS LEF-3 MOLECULE IN COMPLEX WITH SSDNA organism=? DNA sequence DA(Q1) DA(Q2) DA(Q3) DA(Q4) DA(Q5) DA(Q6) DA(Q7) DA(Q8) DA(Q9) DA(Q10) DA(Q11) chainA (177) ASN229 0 0 2 0 0 0 0 0 0 0 0 (178) ALA230 0 1 0 0 0 0 0 0 0 0 0 (259) TYR311 0 0 0 0 0 0 37 0 0 0 0 (308) LYS360 0 0 0 0 0 0 0 2 0 0 0 (311) VAL363 0 0 0 0 0 0 5 0 0 0 0 prot.sequence lrtlnvkgqlltkttmsinnedyylfkflvnnksidyygtqtqffslinnktyelvlqysrkklliksyeqcedmtvcksvtfqefcaneiksllakflygfkiygssnvyklvfvillednngtingvqvemmsdfkrlsgafknhvienendlfdcmykseekyfnlyrikcnhNAnnykslslssnsqlerletddsmfeyefqydytvnisrsnkiiqkhrvtgnftserniyqnsdrfvisydtanekiktsiYnrmenaesktdydtsitlkdvtlsqlnsliesnlvqvdvylvtdpnnvKnnViagitkieidgtyepl >7yq3_E:L_domain-like;Fibronectin_type_III;Growth_factor_receptor_domain; title=HUMAN INSULIN RECEPTOR BOUND WITH A43 DNA APTAMER AND INSULIN organism=? DNA sequence DA(G30) DT(G4):DA(G30) DG(G5):DG(G29) DC(G28) DA(G7):DG(G27) DC(G9)xDA(G26) DC(G10)xDC(G25) DG(G11):DA(G22) DC(G12) DA(G13) DG(G14) DA(G16) DC(G18) DG(G19) DG(G20) DC(G21) chainE (469) TYR477 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 (480) ARG488 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (543) TRP551 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 (546) ARG554 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (668) LYS703 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence hlypgevcpgmdirnnltrlhelencsvieghlqillmfktrpedfrdlsfpklimitdylllfrvygleslkdlfpnltvirgsrlffnyalvifemvhlkelglynlmnitrgsvrieknnelcylatidwsrildsvednhivlnkddneecgdicpcpatvingqfvercwthshcqkvcptickshgctaeglcchseclgncsqpddptkcvacrnfyldgrcvetcpppyyhfqdwrcvnfsfcqdlhhkcknsrrqgchqyvihnnkcipecpsgytmnssnllctpclgpcpkvchllegektidsvtsaqelrgctvingsliinirggnnlaaeleanlglieeisgylkirrsyalvslsffrklrlirgetleignysfyaldnqnlrqlwdwskhnltttqgklffhynpklclseihkmeevsgtkgrqerndialktngdkascenellkfsYirtsfdkillRwepywppdfrdllgfmlfykeapyqnvtefdgqdacgsnswtvvdidpplrsndpksqnhpgWlmRglkpwtqyaifvktlvtfsderrtygaksdiiyvqtdatnpsvpldpisvsnsssqiilkwkppsdpngnithylvfwerqaedselfeldyclkglklpscscpktdsqilkeleessfrKtfedylhnvvhrpfekvvnkeslvisglrhftgyrielqacnqdtpeercsvaayvsartmpeakaddivgpvtheifennvvhlmwqepkepnglivlyevsyrrygdeelhlcvsrkhfalergcrlrglspgnysvriratslagngswteptyfyvtd >7yq3_EF:L_domain-like;Fibronectin_type_III;Growth_factor_receptor_domain; title=HUMAN INSULIN RECEPTOR BOUND WITH A43 DNA APTAMER AND INSULIN organism=? DNA sequence DA(G30) DT(G4):DA(G30) DG(G5):DG(G29) DC(G28) DA(G7):DG(G27) DC(G9)xDA(G26) DC(G10)xDC(G25) DG(G11):DA(G22) DC(G12) DA(G13) DG(G14) DA(G16) DC(G18) DG(G19) DG(G20) DC(G21) chainE (469) TYR477 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 (480) ARG488 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (543) TRP551 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 (546) ARG554 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (668) LYS703 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 chainF (261) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (262) GLN272 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 (315) THR325 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 prot.sequence hlypgevcpgmdirnnltrlhelencsvieghlqillmfktrpedfrdlsfpklimitdylllfrvygleslkdlfpnltvirgsrlffnyalvifemvhlkelglynlmnitrgsvrieknnelcylatidwsrildsvednhivlnkddneecgdicpcpatvingqfvercwthshcqkvcptickshgctaeglcchseclgncsqpddptkcvacrnfyldgrcvetcpppyyhfqdwrcvnfsfcqdlhhkcknsrrqgchqyvihnnkcipecpsgytmnssnllctpclgpcpkvchllegektidsvtsaqelrgctvingsliinirggnnlaaeleanlglieeisgylkirrsyalvslsffrklrlirgetleignysfyaldnqnlrqlwdwskhnltttqgklffhynpklclseihkmeevsgtkgrqerndialktngdkascenellkfsYirtsfdkillRwepywppdfrdllgfmlfykeapyqnvtefdgqdacgsnswtvvdidpplrsndpksqnhpgWlmRglkpwtqyaifvktlvtfsderrtygaksdiiyvqtdatnpsvpldpisvsnsssqiilkwkppsdpngnithylvfwerqaedselfeldyclkglklpscscpktdsqilkeleessfrKtfedylhnvvhrpfekvvnkeslvisglrhftgyrielqacnqdtpeercsvaayvsartmpeakaddivgpvtheifennvvhlmwqepkepnglivlyevsyrrygdeelhlcvsrkhfalergcrlrglspgnysvriratslagngswteptyfyvtd/pgevcpgmdirnnltrlhelencsvieghlqillmfktrpedfrdlsfpklimitdylllfrvygleslkdlfpnltvirgsrlffnyalvifemvhlkelglynlmnitrgsvrieknnelcylatidwsrildsvednhivlnkddneecgdicpncpatvingqfvercwthshcqkvcptickshgctaeglcchseclgncsqpddptkcvacrnfyldgrcvetcpppyyhfqdwrcvnfsfcqdlhhkcknsrRQgchqyvihnnkcipecpsgytmnssnllctpclgpcpkvchllegektidsvTsaqelrgctvingsliinirggnnlaaeleanlglieeisgylkirrsyalvslsffrklrlirgetleignysfyaldnqnlrqlwdwskhnltttqgklffhynpklclseihkmeevsgtkgrqerndialktngdkascenellkfsyirtsfdkillrwepywppdfrdllgfmlfykeapyqnvtefdgqdacgsnswtvvdidpplrsndpksqnhpgwlmrglkpwtqyaifvktlvtfsderrtygaksdiiyvqtdatnpsvpldpisvsnsssqiilkwkppsdpngnithylvfwerqaedselfeldyclkglklcscpktdsqilkeleessfrktfedylhnvvfvprphrpfekvvnkeslvisglrhftgyrielqacnqdtpeercsvaayvsartmpeakaddivgpvtheifennvvhlmwqepkepnglivlyevsyrrygdeelhlcvsrkhfalergcrlrglspgnysvriratslagngswteptyfyvtd >7yqk_ABCDEFGH:Histone-fold;PH_domain-like; title=CRYO-EM STRUCTURE OF GAMMAH2AXK15UB-H4K20ME2 NUCLEOSOME BOUND TO 53BP1 organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DC(I66):DT(J-65) DA(I67):DG(J-66) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 15) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 5) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/vlrdniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aRakactrssraglqfpvgrvhrllrkghyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpkkte/rkrsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakactrssraglqfpvgrvhrllrkghyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllggvtiaqggvlpniqavllpkkt/krsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >7yqk_E:Histone-fold; title=CRYO-EM STRUCTURE OF GAMMAH2AXK15UB-H4K20ME2 NUCLEOSOME BOUND TO 53BP1 organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DC(I66):DT(J-65) DA(I67):DG(J-66) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger >7yrd_A:Histone-fold; title=HISTONE METHYLTRANSFERASE organism=? DNA sequence DA(I1):DT(J292) DT(I2):DA(J291) DC(I3):DG(J290) DA(I4):DT(J289) DA(I5):DT(J288) DT(I6):DA(J287) DA(I7):DT(J286) DT(I8):DA(J285) DC(I9):DG(J284) DC(I10):DG(J283) DA(I11):DT(J282) DC(I12):DG(J281) DC(I13):DG(J280) DT(I14):DA(J279) DG(I15):DC(J278) DC(I16):DG(J277) DA(I17):DT(J276) DG(I18):DC(J275) DA(I19):DT(J274) DT(I20):DA(J273) DT(I21):DA(J272) DC(I22):DG(J271) DT(I23):DA(J270) DA(I24):DT(J269) DC(I25):DG(J268) DC(I26):DG(J267) DA(I27):DT(J266) DA(I28):DT(J265) DA(I29):DT(J264) DA(I30):DT(J263) DG(I31):DC(J262) DT(I32):DA(J261) DG(I33):DC(J260) DT(I34):DA(J259) DA(I35):DT(J258) DT(I36):DA(J257) DT(I37):DA(J256) DT(I38):DA(J255) DG(I39):DC(J254) DG(I40):DC(J253) DA(I41):DT(J252) DA(I42):DT(J251) DA(I43):DT(J250) DC(I44):DG(J249) DT(I45):DA(J248) DG(I46):DC(J247) DC(I47):DG(J246) DT(I48):DA(J245) DC(I49):DG(J244) DC(I50):DG(J243) DA(I51):DT(J242) DT(I52):DA(J241) DC(I53):DG(J240) DA(I54):DT(J239) DA(I55):DT(J238) DA(I56):DT(J237) DA(I57):DT(J236) DG(I58):DC(J235) DG(I59):DC(J234) DC(I60):DG(J233) DA(I61):DT(J232) DT(I62):DA(J231) DG(I63):DC(J230) DT(I64):DA(J229) DT(I65):DA(J228) DC(I66):DG(J227) DA(I67):DT(J226) DG(I68):DC(J225) DC(I69):DG(J224) DG(I70):DC(J223) DG(I71):DC(J222) DA(I72):DT(J221) DA(I73):DT(J220) DT(I74):DA(J219) DT(I75):DA(J218) DC(I76):DG(J217) DC(I77):DG(J216) DG(I78):DC(J215) DC(I79):DG(J214) DT(I80):DA(J213) DG(I81):DC(J212) DA(I82):DT(J211) DA(I83):DT(J210) DC(I84):DG(J209) DA(I85):DT(J208) DT(I86):DA(J207) DG(I87):DC(J206) DC(I88):DG(J205) DC(I89):DG(J204) DT(I90):DA(J203) DT(I91):DA(J202) DT(I92):DA(J201) DT(I93):DA(J200) DG(I94):DC(J199) DA(I95):DT(J198) DT(I96):DA(J197) DG(I97):DC(J196) DG(I98):DC(J195) DA(I99):DT(J194) DG(I100):DC(J193) DC(I101):DG(J192) DA(I102):DT(J191) DG(I103):DC(J190) DT(I104):DA(J189) DT(I105):DA(J188) DT(I106):DA(J187) DC(I107):DG(J186) DC(I108):DG(J185) DA(I109):DT(J184) DA(I110):DT(J183) DA(I111):DT(J182) DT(I112):DA(J181) DA(I113):DT(J180) DC(I114):DG(J179) DA(I115):DT(J178) DC(I116):DG(J177) DT(I117):DA(J176) DT(I118):DA(J175) DT(I119):DA(J174) DT(I120):DA(J173) DG(I121):DC(J172) DG(I122):DC(J171) DT(I123):DA(J170) DA(I124):DT(J169) DG(I125):DC(J168) DA(I126):DT(J167) DA(I127):DT(J166) DT(I128):DA(J165) DC(I129):DG(J164) DT(I130):DA(J163) DG(I131):DC(J162) DC(I132):DG(J161) DA(I133):DT(J160) DG(I134):DC(J159) DG(I135):DC(J158) DT(I136):DA(J157) DG(I137):DC(J156) DG(I138):DC(J155) DA(I139):DT(J154) DT(I140):DA(J153) DA(I141):DT(J152) DT(I142):DA(J151) DT(I143):DA(J150) DG(I144):DC(J149) DA(I145):DT(J148) DT(I146):DA(J147) chainA ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkphRyrPgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >7yrd_C:Histone-fold; title=HISTONE METHYLTRANSFERASE organism=? DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainC ( 31) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kavsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksli >7yrg_B:Histone-fold; title=HISTONE METHYLTRANSFERASE organism=? DNA sequence DA(J147):DT(I146) DT(J148):DA(I145) DC(J149):DG(I144) DA(J150):DT(I143) DA(J151):DT(I142) DT(J152):DA(I141) DA(J153):DT(I140) DT(J154):DA(I139) DC(J155):DG(I138) DC(J156):DG(I137) DA(J157):DT(I136) DC(J158):DG(I135) DC(J159):DG(I134) DT(J160):DA(I133) DG(J161):DC(I132) DC(J162):DG(I131) DA(J163):DT(I130) DG(J164):DC(I129) DA(J165):DT(I128) DT(J166):DA(I127) DT(J167):DA(I126) DC(J168):DG(I125) DT(J169):DA(I124) DA(J170):DT(I123) DC(J171):DG(I122) DC(J172):DG(I121) DA(J173):DT(I120) DA(J174):DT(I119) DA(J175):DT(I118) DA(J176):DT(I117) DG(J177):DC(I116) DT(J178):DA(I115) DG(J179):DC(I114) DT(J180):DA(I113) DA(J181):DT(I112) DT(J182):DA(I111) DT(J183):DA(I110) DT(J184):DA(I109) DG(J185):DC(I108) DG(J186):DC(I107) DA(J187):DT(I106) DA(J188):DT(I105) DA(J189):DT(I104) DC(J190):DG(I103) DT(J191):DA(I102) DG(J192):DC(I101) DC(J193):DG(I100) DT(J194):DA(I99) DC(J195):DG(I98) DC(J196):DG(I97) DA(J197):DT(I96) DT(J198):DA(I95) DC(J199):DG(I94) DA(J200):DT(I93) DA(J201):DT(I92) DA(J202):DT(I91) DA(J203):DT(I90) DG(J204):DC(I89) DG(J205):DC(I88) DC(J206):DG(I87) DA(J207):DT(I86) DT(J208):DA(I85) DG(J209):DC(I84) DT(J210):DA(I83) DT(J211):DA(I82) DC(J212):DG(I81) DA(J213):DT(I80) DG(J214):DC(I79) DC(J215):DG(I78) DG(J216):DC(I77) DG(J217):DC(I76) DA(J218):DT(I75) DA(J219):DT(I74) DT(J220):DA(I73) DT(J221):DA(I72) DC(J222):DG(I71) DC(J223):DG(I70) DG(J224):DC(I69) DC(J225):DG(I68) DT(J226):DA(I67) DG(J227):DC(I66) DA(J228):DT(I65) DA(J229):DT(I64) DC(J230):DG(I63) DA(J231):DT(I62) DT(J232):DA(I61) DG(J233):DC(I60) DC(J234):DG(I59) DC(J235):DG(I58) DT(J236):DA(I57) DT(J237):DA(I56) DT(J238):DA(I55) DT(J239):DA(I54) DG(J240):DC(I53) DA(J241):DT(I52) DT(J242):DA(I51) DG(J243):DC(I50) DG(J244):DC(I49) DA(J245):DT(I48) DG(J246):DC(I47) DC(J247):DG(I46) DA(J248):DT(I45) DG(J249):DC(I44) DT(J250):DA(I43) DT(J251):DA(I42) DT(J252):DA(I41) DC(J253):DG(I40) DC(J254):DG(I39) DA(J255):DT(I38) DA(J256):DT(I37) DA(J257):DT(I36) DT(J258):DA(I35) DA(J259):DT(I34) DC(J260):DG(I33) DA(J261):DT(I32) DC(J262):DG(I31) DT(J263):DA(I30) DT(J264):DA(I29) DT(J265):DA(I28) DT(J266):DA(I27) DG(J267):DC(I26) DG(J268):DC(I25) DT(J269):DA(I24) DA(J270):DT(I23) DG(J271):DC(I22) DA(J272):DT(I21) DA(J273):DT(I20) DT(J274):DA(I19) DC(J275):DG(I18) DT(J276):DA(I17) DG(J277):DC(I16) DC(J278):DG(I15) DA(J279):DT(I14) DG(J280):DC(I13) DG(J281):DC(I12) DT(J282):DA(I11) DG(J283):DC(I10) DG(J284):DC(I9) DA(J285):DT(I8) DT(J286):DA(I7) DA(J287):DT(I6) DT(J288):DA(I5) DT(J289):DA(I4) DG(J290):DC(I3) DA(J291):DT(I2) DT(J292):DA(I1) chainB ( 44) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgrgkggkglgkggakrhrvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >7ysf_A:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF ZNF524 ZF1-4 IN COMPLEX WITH TELOMERIC DNA organism=Homo sapiens DNA sequence DG(B2):DC(C15) DG(B3):DC(C14) DG(B4):DC(C13) DT(B5):DA(C12) DT(B6):DA(C11) DA(B7):DT(C10) DG(B8):DC(C9) DG(B9):DC(C8) DG(B10):DC(C7) DT(B11):DA(C6) DT(B12):DA(C5) DA(B13):DT(C4) DG(B14):DC(C3) DG(B15):DC(C2) chainA ( 15) SER127 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 19) ARG131 0 0 0 0 0 0 0 0 0 0 8 4 7 0 ( 41) ARG153 0 0 0 0 0 0 0 0 1 5 0 0 0 0 ( 43) SER155 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 44) HIS156 0 0 0 0 0 0 0 5 8 0 0 0 0 0 ( 47) ARG159 0 0 0 0 0 0 16 11 6 0 0 0 0 0 ( 68) ARG180 0 0 0 0 0 6 9 0 0 0 0 0 0 0 ( 69) GLU181 0 0 0 0 0 0 0 0 4 3 0 0 0 0 ( 72) GLU184 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 99) ASN211 0 0 0 0 1 10 0 0 0 0 0 0 0 0 (103) ARG215 0 19 14 5 0 0 0 0 0 0 0 0 0 0 prot.sequence phfcpvclrafpylsdleRhsishselkphqckvcgktfkrsSHlrRhcnihaglrpfrcplcprrfREagElahhhrvhsgerpyqcpicrlrfteaNtlrRhakrkhpeam >7yuk_A: title=COMPLEX STRUCTURE OF BANP BEN DOMAIN BOUND TO DNA organism=? DNA sequence DC(D1):DG(C12) DT(D2):DA(C11) DC(D3):DG(C10) DT(D4):DA(C9) DC(D5):DG(C8) DG(D6):DC(C7) DC(D7):DG(C6) DG(D8):DC(C5) DA(D9):DT(C4) DG(D10):DC(C3) DA(D11):DT(C2) DG(D12):DC(C1) chainA (102) SER310 0 0 0 0 0 0 0 0 1 0 0 0 (105) SER313 0 0 0 0 0 0 0 0 8 3 0 0 (108) ARG316 0 0 0 0 0 0 13 13 2 0 0 0 (109) THR317 0 0 0 0 0 0 0 0 0 0 2 0 (112) ARG320 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence seedypngtwlgdennpemrvrcaiipsdmlhistncrtaekmaltlldylfhrevqavsnlsgqgkhgkkqldpltiygirchlfykfgitesdwyrikqSidSkcRTawRrkqr >7yul_A: title=CRYSTAL STRUCTURE OF HUMAN BEND6 BEN DOMAIN IN COMPLEX WITH DNA organism=? DNA sequence DC(C1) DT(C2) DC(C3) DT(C4) DC(C5) DG(C6) DC(C7) DG(C8) DA(C9) DG(C10) DA(C11) DG(C12) chainA ( 43) SER216 0 0 0 0 0 6 0 0 0 0 0 0 ( 44) SER217 0 0 0 0 0 2 0 0 0 0 0 0 ( 45) THR218 0 0 0 0 0 5 2 0 0 0 0 0 ( 81) ARG254 0 0 0 0 15 13 3 0 0 0 0 0 ( 88) ASN261 0 0 0 0 0 0 0 8 0 0 0 0 ( 92) LYS265 0 0 0 0 0 0 0 0 5 6 1 0 prot.sequence fqiekwqiarcnkskpqkfindlmqvlytneymathsltgakSSTsrdkavkpamnqnevqeiigvtkqlfpntddvsirRmigqklNnctK >7yun_AB: title=CRYSTAL STRUCTURE OF HUMAN BEND6 BEN DOMAIN IN COMPLEX WITH METHYLATED DNA organism=? DNA sequence DC(D1):DG(C12) DT(D2):DA(C11) DC(D3):DG(C10) DT(D4):DA(C9) DC(D5):DG(C8) DG(D6):5CM(C7) 5CM(D7):DG(C6) DG(D8):DC(C5) DA(D9):DT(C4) DG(D10):DC(C3) DA(D11):DT(C2) DG(D12):DC(C1) chainA ( 44) SER217 0 0 0 3 10 3 0 0 0 0 0 0 ( 45) THR218 0 0 0 0 0 1 0 0 0 0 0 0 ( 81) ARG254 0 0 0 0 5 0 0 0 0 0 0 0 ( 85) GLN258 0 0 0 0 0 0 0 0 4 1 0 0 ( 88) ASN261 0 0 0 0 0 0 4 8 0 0 0 0 ( 89) ASN262 0 0 0 0 0 0 0 0 0 2 3 0 chainB ( 43) SER216 0 0 0 0 0 0 6 0 0 0 0 0 ( 44) SER217 0 0 0 0 0 0 3 9 5 0 0 0 ( 45) THR218 0 0 0 0 0 0 6 0 0 0 0 0 ( 81) ARG254 0 0 0 0 0 4 14 22 0 0 0 0 ( 85) GLN258 0 0 1 4 0 0 0 0 0 0 0 0 ( 88) ASN261 0 0 0 0 7 12 0 0 0 0 0 0 ( 89) ASN262 0 11 9 0 0 0 0 0 0 0 0 0 prot.sequence fqiekwqiarcnkskpqkfindlmqvlytneymathsltgakSSTsrdkavkpamnqnevqeiigvtkqlfpntddvsirRmigQklNNct/fqiekwqiarcnkskpqkfindlmqvlytneymathsltgakSSTsrdkavkpamnqnevqeiigvtkqlfpntddvsirRmigQklNNctk >7yun_B: title=CRYSTAL STRUCTURE OF HUMAN BEND6 BEN DOMAIN IN COMPLEX WITH METHYLATED DNA organism=? DNA sequence DC(D1):DG(C12) DT(D2):DA(C11) DC(D3):DG(C10) DT(D4):DA(C9) DC(D5):DG(C8) DG(D6):5CM(C7) 5CM(D7):DG(C6) DG(D8):DC(C5) DA(D9):DT(C4) DG(D10):DC(C3) DA(D11):DT(C2) DG(D12):DC(C1) chainB ( 43) SER216 0 0 0 0 0 0 6 0 0 0 0 0 ( 44) SER217 0 0 0 0 0 0 3 9 5 0 0 0 ( 45) THR218 0 0 0 0 0 0 6 0 0 0 0 0 ( 81) ARG254 0 0 0 0 0 4 14 22 0 0 0 0 ( 85) GLN258 0 0 1 4 0 0 0 0 0 0 0 0 ( 88) ASN261 0 0 0 0 7 12 0 0 0 0 0 0 ( 89) ASN262 0 11 9 0 0 0 0 0 0 0 0 0 prot.sequence fqiekwqiarcnkskpqkfindlmqvlytneymathsltgakSSTsrdkavkpamnqnevqeiigvtkqlfpntddvsirRmigQklNNctk >7ywx_E:Histone-fold; title=STRUCTURE OF THE HUMAN CCAN CENP-A ALPHA-SATELLITE COMPLEX organism=HOMO SAPIENS DNA sequence DC(i-64):DG(J64) DC(i-63):DG(J63) DA(i-62):DT(J62) DA(i-61):DT(J61) DT(i-60):DA(J60) DT(i-59):DA(J59) DC(i-58):DG(J58) DC(i-57):DG(J57) DA(i-56):DT(J56) DG(i-55):DC(J55) DA(i-54):DT(J54) DT(i-53):DA(J53) DA(i-52):DT(J52) DC(i-51):DG(J51) DT(i-50):DA(J50) DA(i-49):DT(J49) DC(i-48):DG(J48) DA(i-47):DT(J47) DA(i-46):DT(J46) DA(i-45):DT(J45) DA(i-44):DT(J44) DA(i-43):DT(J43) DG(i-42):DC(J42) DA(i-41):DT(J41) DG(i-40):DC(J40) DT(i-39):DA(J39) DG(i-38):DC(J38) DT(i-37):DA(J37) DT(i-36):DA(J36) DT(i-35):DA(J35) DC(i-34):DG(J34) DA(i-33):DT(J33) DA(i-32):DT(J32) DA(i-31):DT(J31) DA(i-30):DT(J30) DC(i-29):DG(J29) DT(i-28):DA(J28) DG(i-27):DC(J27) DC(i-26):DG(J26) DT(i-25):DA(J25) DC(i-24):DG(J24) DT(i-23):DA(J23) DA(i-22):DT(J22) DT(i-21):DA(J21) DG(i-20):DC(J20) DA(i-19):DT(J19) DA(i-18):DT(J18) DA(i-17):DT(J17) DA(i-16):DT(J16) DG(i-15):DC(J15) DG(i-14):DC(J14) DA(i-13):DT(J13) DA(i-12):DT(J12) DT(i-11):DA(J11) DG(i-10):DC(J10) DT(i-9):DA(J9) DT(i-8):DA(J8) DC(i-7):DG(J7) DA(i-6):DT(J6) DA(i-5):DT(J5) DC(i-4):DG(J4) DT(i-3):DA(J3) DC(i-2):DG(J2) DT(i-1):DA(J1) DA(i0):DT(J0) DT(i1):DA(J-1) DG(i2):DC(J-2) DA(i3):DT(J-3) DG(i4):DC(J-4) DT(i5):DA(J-5) DT(i6):DA(J-6) DG(i7):DC(J-7) DA(i8):DT(J-8) DA(i9):DT(J-9) DT(i10):DA(J-10) DG(i11):DC(J-11) DC(i12):DG(J-12) DA(i13):DT(J-13) DA(i14):DT(J-14) DA(i15):DT(J-15) DC(i16):DG(J-16) DA(i17):DT(J-17) DT(i18):DA(J-18) DC(i19):DG(J-19) DA(i20):DT(J-20) DC(i21):DG(J-21) DA(i22):DT(J-22) DT(i23):DA(J-23) DA(i24):DT(J-24) DG(i25):DC(J-25) DA(i26):DT(J-26) DA(i27):DT(J-27) DG(i28):DC(J-28) DT(i29):DA(J-29) DT(i30):DA(J-30) DT(i31):DA(J-31) DC(i32):DG(J-32) DT(i33):DA(J-33) DG(i34):DC(J-34) DA(i35):DT(J-35) DG(i36):DC(J-36) DA(i37):DT(J-37) DA(i38):DT(J-38) DT(i39):DA(J-39) DG(i40):DC(J-40) DC(i41):DG(J-41) DT(i42):DA(J-42) DT(i43):DA(J-43) DC(i44):DG(J-44) DT(i45):DA(J-45) DG(i46):DC(J-46) DT(i47):DA(J-47) DC(i48):DG(J-48) DT(i49):DA(J-49) DA(i50):DT(J-50) DG(i51):DC(J-51) DT(i52):DA(J-52) DT(i53):DA(J-53) DT(i54):DA(J-54) DT(i55):DA(J-55) DT(i56):DA(J-56) DA(i57):DT(J-57) DT(i58):DA(J-58) DG(i59):DC(J-59) DT(i60):DA(J-60) DG(i61):DC(J-61) DA(i62):DT(J-62) DA(i63):DT(J-63) DC(i64):DG(J-64) DA(i65):DT(J-65) DT(i66):DA(J-66) DA(i67):DT(J-67) DT(i68):DA(J-68) DT(i69):DA(J-69) DC(i71):DG(J-70) DC(i72):DG(J-72) DG(i73):DC(J-73) DT(i74):DA(J-74) DT(i75):DA(J-75) DT(i76):DA(J-76) DC(i77):DG(J-77) DC(i78):DG(J-78) DA(i79):DT(J-79) DC(i81):DG(J-81) DG(i82):DC(J-82) DA(i83):DT(J-83) DA(i84):DT(J-84) DG(i85):DC(J-85) DG(i86):DC(J-86) DC(i87):DG(J-87) DC(i88):DG(J-88) DT(i89):DA(J-89) DC(i90):DG(J-90) DA(i91):DT(J-91) DA(i92):DT(J-92) DA(i93):DT(J-93) DG(i94):DC(J-94) DC(i95):DG(J-95) DG(i96):DC(J-96) DG(i97):DC(J-97) chainE ( 20) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleegl >7yyh_N: title=STRUCTURE OF THE HUMAN CCANDELTAT CENP-A ALPHA-SATELLITE COMPLEX organism=? DNA sequence DA(i73):DT(J171) DC(i74):DG(J170) DA(i75):DT(J169) DA(i76):DT(J168) DA(i77):DT(J167) DA(i78):DT(J166) DA(i79):DT(J165) DG(i80):DC(J164) DA(i81):DT(J163) DG(i82):DC(J162) DT(i83):DA(J161) DG(i84):DC(J160) DT(i85):DA(J159) DT(i86):DA(J158) DT(i87):DA(J157) DC(i88):DG(J156) DA(i89):DT(J155) DA(i90):DT(J154) DA(i91):DT(J153) DA(i92):DT(J152) DC(i93):DG(J151) DT(i94):DA(J150) DG(i95):DC(J149) DC(i96):DG(J148) DT(i97):DA(J147) DC(i98):DG(J146) DT(i99):DA(J145) DA(i100):DT(J144) DT(i101):DA(J143) DC(i102):DG(J142) DA(i103):DT(J141) DA(i104):DT(J140) DA(i105):DT(J139) DA(i106):DT(J138) DG(i107):DC(J137) DG(i108):DC(J136) DA(i110):DT(J135) DT(i111):DA(J133) DG(i112):DC(J132) DT(i113):DA(J131) DT(i114):DA(J130) DC(i115):DG(J129) DA(i116):DT(J128) DA(i117):DT(J127) DC(i118):DG(J126) DT(i119):DA(J125) DC(i120):DG(J124) DT(i121):DA(J123) DG(i122):DC(J122) DT(i123):DA(J121) DG(i124):DC(J120) DA(i125):DT(J119) DG(i126):DC(J118) DT(i127):DA(J117) DT(i128):DA(J116) DG(i129):DC(J115) DA(i130):DT(J114) DA(i131):DT(J113) DT(i132):DA(J112) DG(i133):DC(J111) DC(i134):DG(J110) DA(i135):DT(J109) DA(i136):DT(J108) DT(i137):DA(J107) DC(i138):DG(J106) DA(i139):DT(J105) DT(i140):DA(J104) DC(i141):DG(J103) DA(i142):DT(J102) DC(i143):DG(J101) DA(i144):DT(J100) DA(i145):DT(J99) DA(i146):DT(J98) DG(i147):DC(J97) DA(i148):DT(J96) DA(i149):DT(J95) DG(i150):DC(J94) DT(i151):DA(J93) DT(i152):DA(J92) DT(i153):DA(J91) DC(i154):DG(J90) DT(i155):DA(J89) DG(i156):DC(J88) DA(i157):DT(J87) DG(i158):DC(J86) DA(i159):DT(J85) DA(i160):DT(J84) DT(i161):DA(J83) DG(i162):DC(J82) DC(i163):DG(J81) DT(i164):DA(J80) DT(i165):DA(J79) DC(i166):DG(J78) DT(i167):DA(J77) DG(i168):DC(J76) DT(i169):DA(J75) DT(i170):DA(J74) DT(i171):DA(J73) DA(i172):DT(J72) DG(i173):DC(J71) DT(i174):DA(J70) DT(i175):DA(J69) DT(i176):DA(J68) DT(i177):DA(J67) DT(i178):DA(J66) DA(i179):DT(J65) DT(i180):DA(J64) DG(i181):DC(J63) DT(i182):DA(J62) DG(i183):DC(J61) DA(i184):DT(J60) DA(i185):DT(J59) DG(i186):DC(J58) DA(i187):DT(J57) DT(i188):DA(J56) DA(i189):DT(J55) DT(i190):DA(J54) DT(i191):DA(J53) DC(i192):DG(J52) DC(i193):DG(J51) DC(i194):DG(J50) DG(i195):DC(J49) DT(i196):DA(J48) DT(i197):DA(J47) DT(i198):DA(J46) DC(i199):DG(J45) DC(i200):DG(J44) DA(i201):DT(J43) DC(i203):DG(J41) DG(i204):DC(J40) DA(i205):DT(J39) DA(i206):DT(J38) DG(i207):DC(J37) DG(i208):DC(J36) DC(i209):DG(J35) DC(i210):DG(J34) DT(i211):DA(J33) DC(i212):DG(J32) DA(i213):DT(J31) DA(i214):DT(J30) DA(i215):DT(J29) DG(i216):DC(J28) DC(i217):DG(J27) DG(i218):DC(J26) DG(i219):DC(J25) DT(i220):DA(J24) DC(i221):DG(J23) DC(i222):DG(J22) DA(i223):DT(J21) DA(i224):DT(J20) chainN (162) ARG169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence detvaefikrtilkipmnelttilkawdflsenqlqtvnfrqrkesvvqhlihlceekrasisdaalldiiymqfhqhqkvwevfqmskdlfdmkqfknsfkkilqralknvtvsfreteenavwiriawgtqytkpnqykptyvvyysqtpyaftsssmlRrntpllgqaltiaskhhqivkmdlrsryldslkaivfkqymdsriihenivekervqritqetfgdypqpqlefaqykletkfkseplrclikfssphllealkslapagiadaplsplltcipnkrmnyfkird >7yz7_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ZEBRAFISH FOXH1 BOUND TO THE TGTGGATT SITE organism=Danio rerio DNA sequence DA(B1):DT(C16) DG(B2):DC(C15) DA(B3):DT(C14) DT(B4):DA(C13) DT(B5):DA(C12) DG(B6):DC(C11) DT(B7):DA(C10) DG(B8):DC(C9) DG(B9):DC(C8) DA(B10):DT(C7) DT(B11):DA(C6) DT(B12):DA(C5) DG(B13):DC(C4) DA(B14):DT(C3) DG(B15):DC(C2) DA(B16):DT(C1) chainA ( 1) LYS90 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 3) TYR92 0 0 0 0 0 0 0 0 0 4 10 6 0 0 0 0 ( 5) ARG94 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 ( 54) ASP143 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 ( 55) SER144 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 57) ARG146 0 0 0 0 15 15 6 0 0 0 0 0 0 0 0 0 ( 58) HIS147 0 0 0 0 0 0 0 13 7 12 0 0 0 0 0 0 ( 59) ASN148 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 61) SER150 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 79) LYS168 0 0 1 7 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence KnYqRypkppysylamiamviqnspekkltlseilkeistlfpffkgnykgwrDSvRHNlSsydcfvkvlkdpgkpqgKgnfwtvevnriplellkrqntavsrqdetifaqdlapyifq >7yza_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ZEBRAFISH FOXH1 BOUND TO THE TGTGTATT SITE organism=Danio rerio DNA sequence DA(B1):DT(C16) DG(B2):DC(C15) DA(B3):DT(C14) DT(B4):DA(C13) DT(B5):DA(C12) DG(B6):DC(C11) DT(B7):DA(C10) DG(B8):DC(C9) DT(B9):DA(C8) DA(B10):DT(C7) DT(B11):DA(C6) DT(B12):DA(C5) DG(B13):DC(C4) DA(B14):DT(C3) DG(B15):DC(C2) DA(B16):DT(C1) chainA ( 3) LYS90 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 ( 5) TYR92 0 0 0 0 0 0 0 0 0 4 10 6 0 0 0 0 ( 7) ARG94 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 ( 56) ASP143 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 ( 57) SER144 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 59) ARG146 0 0 0 0 13 16 8 0 0 0 0 0 0 0 0 0 ( 60) HIS147 0 0 0 0 0 0 0 0 7 15 0 0 0 0 0 0 ( 61) ASN148 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 63) SER150 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 65) TYR152 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 81) LYS168 0 0 1 6 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkKnYqRypkppysylamiamviqnspekkltlseilkeistlfpffkgnykgwrDSvRHNlSsYdcfvkvlkdpgkpqgKgnfwtvevnriplellkrqntavsrqdetifaqdlapyifq >7yzb_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN FOXH1 BOUND TO THE TGTGGATT SITE organism=Homo sapiens DNA sequence DA(B1):DT(C16) DG(B2):DC(C15) DA(B3):DT(C14) DT(B4):DA(C13) DT(B5):DA(C12) DG(B6):DC(C11) DT(B7):DA(C10) DG(B8):DC(C9) DG(B9):DC(C8) DA(B10):DT(C7) DT(B11):DA(C6) DT(B12):DA(C5) DG(B13):DC(C4) DC(B14):DG(C3) DG(B15):DC(C2) DA(B16):DT(C1) chainA ( 3) TYR28 0 0 0 0 0 0 0 0 0 4 10 6 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 ( 54) ASP79 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 ( 55) SER80 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 57) ARG82 0 0 0 0 11 16 7 0 0 0 0 0 0 0 0 0 ( 58) HIS83 0 0 0 0 0 0 0 14 7 13 0 0 0 0 0 0 ( 59) ASN84 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 61) SER86 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 79) LYS104 0 3 6 6 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krYlRhdkppytylamialviqaapsrrlklaqiirqvqavfpffredyegwkDSiRHNlSsnrcfrkvpkdpakpqaKgnfwavdvslipaealrlqntalcrrwqfakdlgpyvlhgrpyrpp >7yzc_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ZEBRAFISH FOXH1 BOUND TO THE TGTTTATT SITE organism=Danio rerio DNA sequence DT(C1):DA(B16) DC(C2):DG(B15) DT(C3):DA(B14) DC(C4):DG(B13) DA(C5):DT(B12) DA(C6):DT(B11) DT(C7):DA(B10) DA(C8):DT(B9) DA(C9):DT(B8) DA(C10):DT(B7) DC(C11):DG(B6) DA(C12):DT(B5) DA(C13):DT(B4) DT(C14):DA(B3) DC(C15):DG(B2) DT(C16):DA(B1) chainA ( 2) TYR92 0 0 0 0 4 10 4 0 0 0 0 0 0 0 0 0 ( 4) ARG94 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 ( 53) ASP143 0 0 0 0 0 0 0 4 12 0 0 0 0 0 0 0 ( 54) SER144 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 56) ARG146 0 0 0 0 0 0 0 0 0 6 15 14 0 0 0 0 ( 57) HIS147 0 0 0 0 0 0 13 10 9 0 0 0 0 0 0 0 ( 58) ASN148 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 60) SER150 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 ( 78) LYS168 0 0 0 0 0 0 0 0 0 0 0 5 4 2 0 0 prot.sequence nYqRypkppysylamiamviqnspekkltlseilkeistlfpffkgnykgwrDSvRHNlSsydcfvkvlkdpgkpqgKgnfwtvevnriplellkrqntavsrqdfaqdlapyifq >7yzd_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE ZEBRAFISH FOXH1 BOUND TO THE TGTTTACT SITE (FKH MOTIF GTAAACA) organism=Danio rerio DNA sequence DA(B1):DT(C16) DG(B2):DC(C15) DA(B3):DT(C14) DT(B4):DA(C13) DT(B5):DA(C12) DG(B6):DC(C11) DT(B7):DA(C10) DT(B8):DA(C9) DT(B9):DA(C8) DA(B10):DT(C7) DC(B11):DG(C6) DT(B12):DA(C5) DG(B13):DC(C4) DA(B14):DT(C3) DG(B15):DC(C2) DA(B16):DT(C1) chainA ( 1) TYR92 0 0 0 0 0 0 0 0 0 4 13 4 0 0 0 0 ( 3) ARG94 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 ( 52) ASP143 0 0 0 0 0 0 0 13 4 0 0 0 0 0 0 0 ( 53) SER144 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 55) ARG146 0 0 0 0 11 14 5 0 0 0 0 0 0 0 0 0 ( 56) HIS147 0 0 0 0 0 0 0 12 8 13 0 0 0 0 0 0 ( 59) SER150 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 ( 60) SER151 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 77) LYS168 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence YqRypkppysylamiamviqnspekkltlseilkeistlfpffkgnykgwrDSvRHnlSSydcfvkvlkdpgkpqgKgnfwtvevnriplellkrqntavsrfaqdlapyif >7yze_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN FOXA2 BOUND TO THE TGTTTACT SITE (FORKHEAD MOTIF GTAAACA) organism=Homo sapiens DNA sequence DT(C1):DA(B16) DC(C2):DG(B15) DT(C3):DA(B14) DC(C4):DG(B13) DA(C5):DT(B12) DG(C6):DC(B11) DT(C7):DA(B10) DA(C8):DT(B9) DA(C9):DT(B8) DA(C10):DT(B7) DC(C11):DG(B6) DA(C12):DT(B5) DA(C13):DT(B4) DT(C14):DA(B3) DC(C15):DG(B2) DT(C16):DA(B1) chainA ( 54) ASN205 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 ( 55) SER206 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 57) ARG208 0 0 0 0 0 0 0 0 0 1 4 9 0 0 0 0 ( 58) HIS209 0 0 0 0 0 1 15 10 7 0 0 0 0 0 0 0 ( 61) SER212 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 ( 62) PHE213 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 prot.sequence rrsythakppysyislitmaiqqspnkmltlseiyqwimdlfpfyrqnqqrwqNSiRHslSFndcflkvprspdkpgkgsfwtlhpd >7yzf_C:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE HUMAN FOXA2 BOUND TO THE TGTTTATT SITE (FORKHEAD MOTIF ATAAACA) organism=Homo sapiens DNA sequence DT(B1):DA(A16) DC(B2):DG(A15) DT(B3):DA(A14) DC(B4):DG(A13) DA(B5):DT(A12) DA(B6):DT(A11) DT(B7):DA(A10) DA(B8):DT(A9) DA(B9):DT(A8) DA(B10):DT(A7) DC(B11):DG(A6) DA(B12):DT(A5) DA(B13):DT(A4) DT(B14):DA(A3) DC(B15):DG(A2) DT(B16):DA(A1) chainC ( 53) ASN205 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 ( 54) SER206 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 56) ARG208 0 0 0 0 0 0 0 0 0 1 4 7 0 0 0 0 ( 57) HIS209 0 0 0 0 0 1 14 10 6 0 0 0 0 0 0 0 ( 60) SER212 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 ( 61) PHE213 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence rsythakppysyislitmaiqqspnkmltlseiyqwimdlfpfyrqnqqrwqNSiRHslSFndcflkvprspdkpgkgsfwtlhpd >7yzg_A:"Winged_helix"_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE XENOPUS FOXH1 BOUND TO THE TGTGGATT SITE organism=Xenopus laevis DNA sequence DC(C1):DG(B16) DT(C2):DA(B15) DC(C3):DG(B14) DA(C4):DT(B13) DA(C5):DT(B12) DT(C6):DA(B11) DC(C7):DG(B10) DC(C8):DG(B9) DA(C9):DT(B8) DC(C10):DG(B7) DA(C11):DT(B6) DA(C12):DT(B5) DT(C13):DA(B4) DC(C14):DG(B3) DT(C15):DA(B2) DG(C16):DC(B1) chainA ( 1) ARG114 0 0 9 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 50) ASP163 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 ( 51) SER164 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 53) ARG166 0 0 0 0 0 0 0 0 4 10 14 0 0 0 0 0 ( 54) HIS167 0 0 0 0 0 7 7 14 0 0 0 0 0 0 0 0 ( 57) SER170 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 75) LYS188 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 prot.sequence RynkppysylamialviqnspekrlklsqilkevstlfpffngdymgwkDSiRHnlSssdcfkkilkdpgkpqaKgnfwtvdvsripldamklqntaltrggsdyfvqdlapyilhnykye >7yzo_ACD:Metallo-dependent_phosphatases;P-loop_containing_nucleoside_triphosphate_hydrolases; title=ENDONUCLEASE STATE OF THE E. COLI MRE11-RAD50 (SBCCD) HEAD COMPLEX BOUND TO ADP AND DSDNA organism=? DNA sequence DC(E-34):DG(F58) DT(E-33):DA(F57) DG(E-32):DC(F56) DG(E-31):DC(F55) DA(E-30):DT(F54) DG(E-29):DC(F53) DG(E-28):DC(F52) DT(E-27):DA(F51) DG(E-26):DC(F50) DG(E-25):DC(F49) DC(E-24):DG(F48) DA(E-23):DT(F47) DA(E-22):DT(F46) DC(E-21):DG(F45) DG(E-20):DC(F44) DC(E-19):DG(F43) DC(E-18):DG(F42) DA(E-17):DT(F41) DA(E-16):DT(F40) DT(E-15):DA(F39) DC(E-14):DG(F38) DA(E-13):DT(F37) DG(E-12):DC(F36) DC(E-11):DG(F35) DA(E-10):DT(F34) DA(E-9):DT(F33) DC(E-8):DG(F32) DG(E-7):DC(F31) DA(E-6):DT(F30) DC(E-5):DG(F29) DT(E-4):DA(F28) chainC (217) LYS890 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (110) GLN110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 chainA (190) LEU204 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrilhtsdwhlgqnfysksreaehqafldwlletaqthqvdaiivagdvfdtgsppsyartlynrfvvnlqqtgchlvvlagnqdsvatlnesrdimaflnttvvasaghapqilprrdgtpgavlcpipflrprdiitsqaglngiekqqhllaaitdyyqqhyadacklrgdqplpiiatghlttvgLdafpaqnfppadyialghihraqiiggmehvrycgspiplsfdecgkskyvhlvtfsngklesvenlnvpvtqpmavlkgdlasitaqleqwrdvsqeppvwldieittdeylhdiqrkiqalteslpvevllvrrsreqrervlasqqretlselsveevfnrrlaleeldesqqqrlqhlftttlhtla/mkilslrlknlnslkgewkidftrepfasnglfaitgptgagkttlldaiclalyhetprlsnvsqsqndlmtrdtaeclaevefevkgeayrafwsqnrarnqpdgnlqvprvelarcadgkiladkvkdkleltatltgldygrftrsmllsqgqfaaflnakpkeraelleeltgteiygqisamvfeqhksarteleqqvedwgylnsligsKegdkfrkfaqgltldnlvhlanqqltrlhgryllqrkasealevevvdtwqadavrdtrtlsggesflvslalalalsdlvshktridslfldegfgtldsetldtaldaldalnasgktigvishveamkeripvqikvkkinglgysklestfav/mkilslrlknlnslkgewkidftrepfasnglfaitgptgagkttlldaiclalyhetprlsnvsqsqndlmtrdtaeclaevefevkgeayrafwsqnrarnqpdgnlQvprvelarcadgkiladkvkdkleltatltgldygrftrsmllsqgqfaaflnakpkeraelleeltgteiygqisamvfeqhksarteltqqvedwgylnsligskegdkfrkfaqgltldnlvhlanqqltrlhgryllqrkasealevevvdtwqadavrdtrtlsggesflvslalalalsdlvshktridslfldegfgtldsetldtaldaldalnasgktigvishveamkeripvqikvkkinglgysklestfav >7yzo_D:P-loop_containing_nucleoside_triphosphate_hydrolases; title=ENDONUCLEASE STATE OF THE E. COLI MRE11-RAD50 (SBCCD) HEAD COMPLEX BOUND TO ADP AND DSDNA organism=? DNA sequence DA(F28):DT(E-4) DG(F29):DC(E-5) DT(F30):DA(E-6) DC(F31):DG(E-7) DG(F32):DC(E-8) DT(F33):DA(E-9) DT(F34):DA(E-10) DG(F35):DC(E-11) DC(F36):DG(E-12) DT(F37):DA(E-13) DG(F38):DC(E-14) DA(F39):DT(E-15) DT(F40):DA(E-16) DT(F41):DA(E-17) DG(F42):DC(E-18) DG(F43):DC(E-19) DC(F44):DG(E-20) DG(F45):DC(E-21) DT(F46):DA(E-22) DT(F47):DA(E-23) DG(F48):DC(E-24) DC(F49):DG(E-25) DC(F50):DG(E-26) DA(F51):DT(E-27) DC(F52):DG(E-28) DC(F53):DG(E-29) DT(F54):DA(E-30) DC(F55):DG(E-31) DC(F56):DG(E-32) DA(F57):DT(E-33) DG(F58):DC(E-34) chainD (110) GLN110 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkilslrlknlnslkgewkidftrepfasnglfaitgptgagkttlldaiclalyhetprlsnvsqsqndlmtrdtaeclaevefevkgeayrafwsqnrarnqpdgnlQvprvelarcadgkiladkvkdkleltatltgldygrftrsmllsqgqfaaflnakpkeraelleeltgteiygqisamvfeqhksarteltqqvedwgylnsligskegdkfrkfaqgltldnlvhlanqqltrlhgryllqrkasealevevvdtwqadavrdtrtlsggesflvslalalalsdlvshktridslfldegfgtldsetldtaldaldalnasgktigvishveamkeripvqikvkkinglgysklestfav >7z03_ACD:Metallo-dependent_phosphatases;P-loop_containing_nucleoside_triphosphate_hydrolases; title=ENDONUCLEASE STATE OF THE E. COLI MRE11-RAD50 (SBCCD) HEAD COMPLEX BOUND TO ADP AND EXTENDED DSDNA organism=? DNA sequence DG(E-42):DC(F66) DG(E-41):DC(F65) DG(E-40):DC(F64) DC(E-39):DG(F63) DC(E-38):DG(F62) DA(E-37):DT(F61) DG(E-36):DC(F60) DA(E-35):DT(F59) DC(E-34):DG(F58) DT(E-33):DA(F57) DG(E-32):DC(F56) DG(E-31):DC(F55) DA(E-30):DT(F54) DG(E-29):DC(F53) DG(E-28):DC(F52) DT(E-27):DA(F51) DG(E-26):DC(F50) DG(E-25):DC(F49) DC(E-24):DG(F48) DA(E-23):DT(F47) DA(E-22):DT(F46) DC(E-21):DG(F45) DG(E-20):DC(F44) DC(E-19):DG(F43) DC(E-18):DG(F42) DA(E-17):DT(F41) DA(E-16):DT(F40) DT(E-15):DA(F39) DC(E-14):DG(F38) DA(E-13):DT(F37) DG(E-12):DC(F36) DC(E-11):DG(F35) DA(E-10):DT(F34) DA(E-9):DT(F33) DC(E-8):DG(F32) DG(E-7):DC(F31) DA(E-6):DT(F30) DC(E-5):DG(F29) DT(E-4):DA(F28) chainC chainD (110) GLN110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 chainA prot.sequence mrilhtsdwhlgqnfysksreaehqafldwlletaqthqvdaiivagdvfdtgsppsyartlynrfvvnlqqtgchlvvlagnqdsvatlnesrdimaflnttvvasaghapqilprrdgtpgavlcpipflrprdiitsqaglngiekqqhllaaitdyyqqhyadacklrgdqplpiiatghlttvgldafpaqnfppadyialghihraqiiggmehvrycgspiplsfdecgkskyvhlvtfsngklesvenlnvpvtqpmavlkgdlasitaqleqwrdvsqeppvwldieittdeylhdiqrkiqalteslpvevllvrrsreqrervlasqqretlselsveevfnrrlaleeldesqqqrlqhlftttlhtla/mkilslrlknlnslkgewkidftrepfasnglfaitgptgagkttlldaiclalyhetprlsnvsqsqndlmtrdtaeclaevefevkgeayrafwsqnrarnqpdgnlqvprvelarcadgkiladkvkdkleltatltgldygrftrsmllsqgqfaaflnakpkeraelleeltgteiygqisamvfeqhksarteleqqvedwgylnsligskegdkfrkfaqgltldnlvhlanqqltrlhgryllqrkasealevevvdtwqadavrdtrtlsggesflvslalalalsdlvshktridslfldegfgtldsetldtaldaldalnasgktigvishveamkeripvqikvkkinglgysklestfav/mkilslrlknlnslkgewkidftrepfasnglfaitgptgagkttlldaiclalyhetprlsnvsqsqndlmtrdtaeclaevefevkgeayrafwsqnrarnqpdgnlQvprvelarcadgkiladkvkdkleltatltgldygrftrsmllsqgqfaaflnakpkeraelleeltgteiygqisamvfeqhksarteltqqvedwgylnsligskegdkfrkfaqgltldnlvhlanqqltrlhgryllqrkasealevevvdtwqadavrdtrtlsggesflvslalalalsdlvshktridslfldegfgtldsetldtaldaldalnasgktigvishveamkeripvqikvkkinglgysklestfav >7z0o_CDE:Histone-fold; title=STRUCTURE OF TRANSCRIPTION FACTOR UAF IN COMPLEX WITH TBP AND 35S RRNA PROMOTER DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T52):DG(N-52) DC(T53):DG(N-53) DC(T54):DG(N-54) DC(T55):DG(N-55) DT(T56):DA(N-56) DC(T57):DG(N-57) DC(T58):DG(N-58) DC(T59):DG(N-59) DA(T60):DT(N-60) DT(T61):DA(N-61) DT(T62):DA(N-62) DA(T63):DT(N-63) DC(T64):DG(N-64) DA(T65):DT(N-65) DA(T66):DT(N-66) DA(T67):DT(N-67) DC(T68):DG(N-68) DT(T69):DA(N-69) DA(T70):DT(N-70) DA(T71):DT(N-71) DA(T72):DT(N-72) DA(T73):DT(N-73) DT(T74):DA(N-74) DC(T75):DG(N-75) DT(T76):DA(N-76) DT(T77):DA(N-77) DA(T78):DT(N-78) DC(T79):DG(N-79) DT(T80):DA(N-80) DT(T81):DA(N-81) DT(T82):DA(N-82) DT(T83):DA(N-83) DA(T84):DT(N-84) DT(T85):DA(N-85) DT(T86):DA(N-86) DT(T87):DA(N-87) DT(T88):DA(N-88) DC(T89):DG(N-89) DT(T90):DA(N-90) chainC ( 13) ARG50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE (236) ARG295 0 0 0 0 0 0 0 0 0 0 0 1 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ASP307 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) LYS308 0 0 0 0 0 7 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) ARG309 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphrykpgtvalReirrfqkstellirklpfqrlvreiaqdfktdlrfqssaigalqesveaylvslfedtnlaaihakrvtiqkkdiklarrlrge/hqqlrkyvelynKeveefyngaefhpskvhvksiheissvgvdwdseekntffwclsrysihrvdewrsllprksameilgyyrllrrasasarsrapiayemsaewvaletklsetvmaitegaaevadeeghceglidyeswkrrwvaiyshsriaeirplprhalplsrsatqtlercvsrytrtllwctalagmasrsvsaraslptvvtrrqveralctearsrdlhvlprrivltlrkweldypregklfrtkemahlflqsqlsrdeideadlfrsalhenqllkwlsk/etlksanelldslehshrvdlslhlysayllkrllykanekkhfyevnqfvktqikdnwtswpnpntiidpsvdklyedipvqpgeisnralmhasdmmrveldaqwqkflsksaldhdvtldvdelnipneisrnilvkldslfeglhdkiakenefdvrqdkhsnkytyhdlvsrgcemnedmtdiymkslelyndipekykkrkfrlpkqilkkyhqpkktssylkellsktRedfipvekllkDKRltskdksklqrlnreetedalnkrtffqvkgyledeneisdyelddcliel >7z0o_E: title=STRUCTURE OF TRANSCRIPTION FACTOR UAF IN COMPLEX WITH TBP AND 35S RRNA PROMOTER DNA organism=SACCHAROMYCES CEREVISIAE DNA sequence DC(T52):DG(N-52) DC(T53):DG(N-53) DC(T54):DG(N-54) DC(T55):DG(N-55) DT(T56):DA(N-56) DC(T57):DG(N-57) DC(T58):DG(N-58) DC(T59):DG(N-59) DA(T60):DT(N-60) DT(T61):DA(N-61) DT(T62):DA(N-62) DA(T63):DT(N-63) DC(T64):DG(N-64) DA(T65):DT(N-65) DA(T66):DT(N-66) DA(T67):DT(N-67) DC(T68):DG(N-68) DT(T69):DA(N-69) DA(T70):DT(N-70) DA(T71):DT(N-71) DA(T72):DT(N-72) DA(T73):DT(N-73) DT(T74):DA(N-74) DC(T75):DG(N-75) DT(T76):DA(N-76) DT(T77):DA(N-77) DA(T78):DT(N-78) DC(T79):DG(N-79) DT(T80):DA(N-80) DT(T81):DA(N-81) DT(T82):DA(N-82) DT(T83):DA(N-83) DA(T84):DT(N-84) DT(T85):DA(N-85) DT(T86):DA(N-86) DT(T87):DA(N-87) DT(T88):DA(N-88) DC(T89):DG(N-89) DT(T90):DA(N-90) chainE (236) ARG295 0 0 0 0 0 0 0 0 0 0 0 1 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ASP307 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) LYS308 0 0 0 0 0 7 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) ARG309 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence etlksanelldslehshrvdlslhlysayllkrllykanekkhfyevnqfvktqikdnwtswpnpntiidpsvdklyedipvqpgeisnralmhasdmmrveldaqwqkflsksaldhdvtldvdelnipneisrnilvkldslfeglhdkiakenefdvrqdkhsnkytyhdlvsrgcemnedmtdiymkslelyndipekykkrkfrlpkqilkkyhqpkktssylkellsktRedfipvekllkDKRltskdksklqrlnreetedalnkrtffqvkgyledeneisdyelddcliel >7z0u_A:WRKY_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ATWRKY18 DNA-BINDING DOMAIN IN COMPLEX WITH W- BOX DNA organism=Arabidopsis thaliana DNA sequence DC(B1):DG(C15) DG(B2):DC(C14) DC(B3):DG(C13) DC(B4):DG(C12) DT(B5):DA(C11) DT(B6):DA(C10) DG(B7):DC(C9) DA(B8):DT(C8) DC(B9):DG(C7) DC(B10):DG(C6) DA(B11):DT(C5) DG(B12):DC(C4) DC(B13):DG(C3) DG(B14):DC(C2) DC(B15):DG(C1) chainA ( 26) LYS183 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 27) TYR184 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 29) GLN186 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 30) LYS187 0 0 0 0 0 0 0 3 11 5 0 0 0 0 0 ( 41) TYR198 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 prot.sequence nvstvyvptetsdtsltvkdgfqwrKYgQKvtrdnpspraYfrcsfapscpvkkkvqrsaedpsllvatyegthnhlg >7z1l_ABE:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF YEAST RNA POLYMERASE III PRE-TERMINATION COMPLEX (PTC) organism=? DNA sequence DT(S26):DT(T19) DT(S27):DA(T18) DG(S28):DC(T17) DC(S29):DG(T16) DC(S30):DG(T15) DT(S31):DA(T14) DT(S32):DA(T13) DC(S33):DG(T12) DC(S34):DG(T11) DG(S35):DC(T10) DA(S36):DT(T9) DA(S37):DT(T8) DA(S38):DT(T7) DA(S39):DT(T6) DT(S40):DA(T5) DT(S41):DA(T4) DT(S42):DA(T3) DT(S43):DA(T2) DG(S44):DC(T1) chainA (152) ARG152 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (185) TRP185 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (1351) ARG1373 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (442) LYS479 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ARG481 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence mkevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqRrclhcgalngvvkkaaagagsaalkiihdtfrWvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpamlpgsvkpirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavktaetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepgtqmtlktfhfagvasmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalk/intaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeKsRkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >7z1l_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURE OF YEAST RNA POLYMERASE III PRE-TERMINATION COMPLEX (PTC) organism=? DNA sequence DT(S26):DT(T19) DT(S27):DA(T18) DG(S28):DC(T17) DC(S29):DG(T16) DC(S30):DG(T15) DT(S31):DA(T14) DT(S32):DA(T13) DC(S33):DG(T12) DC(S34):DG(T11) DG(S35):DC(T10) DA(S36):DT(T9) DA(S37):DT(T8) DA(S38):DT(T7) DA(S39):DT(T6) DT(S40):DA(T5) DT(S41):DA(T4) DT(S42):DA(T3) DT(S43):DA(T2) DG(S44):DC(T1) chainB (442) LYS479 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ARG481 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence intaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeKsRkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq >7z1m_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURE OF YEAST RNA POLYMERASE III ELONGATION COMPLEX (EC) organism=? DNA sequence DC(T1):DG(S44) DA(T2):DT(S43) DA(T3):DT(S42) DA(T4):DT(S41) DA(T5):DT(S40) DT(T6):DA(S39) DT(T7):DA(S38) DT(T8):DA(S37) DT(T9):DA(S36) DC(T10):DG(S35) DG(T11):DC(S34) DG(T12):DC(S33) DA(T13):DT(S32) DA(T14):DT(S31) DG(T15):DC(S30) DG(T16):DC(S29) DT(T19):DG(S28) chainA (354) LYS360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (1351) ARG1373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 prot.sequence mkevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqrrclhcgalngvvkkaaagagsaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpamlpgsvkpirgfcqrlkgKqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavktaetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepgtqmtlktfhfagvasmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalk >7z1m_ABE:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF YEAST RNA POLYMERASE III ELONGATION COMPLEX (EC) organism=? DNA sequence DG(S28):DT(T19) DC(S29):DG(T16) DC(S30):DG(T15) DT(S31):DA(T14) DT(S32):DA(T13) DC(S33):DG(T12) DC(S34):DG(T11) DG(S35):DC(T10) DA(S36):DT(T9) DA(S37):DT(T8) DA(S38):DT(T7) DA(S39):DT(T6) DT(S40):DA(T5) DT(S41):DA(T4) DT(S42):DA(T3) DT(S43):DA(T2) DG(S44):DC(T1) chainA (354) LYS360 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1351) ARG1373 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (442) LYS479 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ARG481 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence mkevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqrrclhcgalngvvkkaaagagsaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpamlpgsvkpirgfcqrlkgKqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavktaetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepgtqmtlktfhfagvasmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalk/intaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeKsRkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >7z1n_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURE OF YEAST RNA POLYMERASE III DELTA C53-C37-C11 organism=? DNA sequence DT(S27):DA(T18) DG(S28):DC(T17) DC(S29):DG(T16) DC(S30):DG(T15) DT(S31):DA(T14) DT(S32):DA(T13) DC(S33):DG(T11) DG(S35):DC(T10) DA(S36):DT(T9) DA(S37):DT(T8) DA(S38):DT(T7) DA(S39):DT(T6) DT(S40):DA(T5) DT(S41):DA(T4) DT(S42):DA(T3) DG(S44):DC(T1) chainA (152) ARG152 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (1348) ARG1373 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqRrclhcgalngvvkkaaagagsaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpamlpgpirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavktaetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepgtqmtlktfhfagvasmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalk >7z1n_ABE:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF YEAST RNA POLYMERASE III DELTA C53-C37-C11 organism=? DNA sequence DT(S27):DA(T18) DG(S28):DC(T17) DC(S29):DG(T16) DC(S30):DG(T15) DT(S31):DA(T14) DT(S32):DA(T13) DC(S33):DG(T11) DG(S35):DC(T10) DA(S36):DT(T9) DA(S37):DT(T8) DA(S38):DT(T7) DA(S39):DT(T6) DT(S40):DA(T5) DT(S41):DA(T4) DT(S42):DA(T3) DG(S44):DC(T1) chainA (152) ARG152 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (1348) ARG1373 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (444) ARG481 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence mkevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqRrclhcgalngvvkkaaagagsaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpamlpgpirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavktaetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepgtqmtlktfhfagvasmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalk/intaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeksRkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsadapnpnnvnvqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >7z1o_ABE:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF YEAST RNA POLYMERASE III PTC + NTPS organism=? DNA sequence DT(S27):DA(T18) DG(S28):DC(T17) DC(S29):DG(T16) DC(S30):DG(T15) DT(S31):DA(T14) DT(S32):DA(T13) DC(S33):DG(T12) DC(S34):DG(T11) DG(S35):DC(T10) DA(S36):DT(T9) DA(S37):DT(T8) DA(S38):DT(T7) DA(S39):DT(T6) DT(S40):DA(T5) DT(S41):DA(T4) DT(S42):DA(T3) DT(S43):DA(T2) DG(S44):DC(T1) chainA (152) ARG152 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (185) TRP185 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 (1351) ARG1373 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence mkevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqRrclhcgalngvvkkaaagagsaalkiihdtfrWvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmmqdspasneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpamlpgsvkpirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavktaetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepgtqmtlktfhfagvasmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalk/intaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivnGtekvilvqeqlsknriiveadekkgivqasvtSstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeksrkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpKhirlssdekrellkryrlkesqlpriqradpvAlylglkrgevvkiirksetsgryasyricm >7z1z_DEIN:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=MVV STRAND TRANSFER COMPLEX (STC) INTASOME IN COMPLEX WITH LEDGF/P75 AT 3.5 A RESOLUTION organism=VISNA/MAEDI VIRUS EV1 KV1772 DNA sequence DC(W1):DG(X21) DA(W2):DT(X20) DC(W3):DG(X19) DC(W4):DG(X18) DG(W5):DC(X17) DG(W6):DC(X16) DA(W7):DT(X15) DG(W8):DC(X14) DC(W9):DG(X13) DG(W10):DC(X12) DG(W11):DC(X11) DA(W12):DT(X10) DT(W13):DA(X9) DC(W14):DG(X8) DT(W15):DA(X7) DC(W16):DG(X6) DG(W17):DC(X5) DC(W18):DG(X4) chainD (207) ARG231 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 chainE chainI (148) GLN148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (151) ALA151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (154) GLU154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (155) ARG155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 12 6 0 chainN prot.sequence wieniplaeeehnkwhqdavslhlefgiprtaaedidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkRghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk/wieniplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqEkirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfi/wieniplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkmpstlrgsnkrgidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpQsqAlvERthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk/niplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlknTleKliPMfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk >7z1z_FL:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=MVV STRAND TRANSFER COMPLEX (STC) INTASOME IN COMPLEX WITH LEDGF/P75 AT 3.5 A RESOLUTION organism=VISNA/MAEDI VIRUS EV1 KV1772 DNA sequence DC(Z1):DG(Y21) DA(Z2):DT(Y20) DC(Z3):DG(Y19) DC(Z4):DG(Y18) DG(Z5):DC(Y17) DG(Z6):DC(Y16) DA(Z7):DT(Y15) DG(Z8):DC(Y14) DC(Z9):DG(Y13) DG(Z10):DC(Y12) DG(Z11):DC(Y11) DA(Z12):DT(Y10) DT(Z13):DA(Y9) DC(Z14):DG(Y8) DT(Z15):DA(Y7) DC(Z16):DG(Y6) DG(Z17):DC(Y5) DC(Z18):DG(Y4) chainF chainL (207) ARG231 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 prot.sequence niplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk/wieniplaeeehnkwhqdavslhlefgiprtaaedidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkRghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk >7z24_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH A DNA APTAMER IN COMPLEX WITH NEVIRAPINE organism=? DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA (211) MET230 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (246) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (456) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaclvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggne >7z24_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH A DNA APTAMER IN COMPLEX WITH NEVIRAPINE organism=? DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA (211) MET230 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (246) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (456) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainB prot.sequence spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaclvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggne/tvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttPyelhpdkwtvqpivlpekdswtvndiqklvgklnWasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyartndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwy >7z29_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF NNRTI RESISTANT M184I/E138K MUTANT HIV-1 REVERSE TRANSCRIPTASE WITH A DNA APTAMER IN COMPLEX WITH NEVIRAPINE organism=? DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 73) GLU89 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (206) MET230 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 (241) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainB prot.sequence spietvpvklkpgmdgpkvkqwplteekikalveictemekegkisnpyntpvfacklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqyiddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnktpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllRwglttpyelhpdkwtvqpivlpekdswtvndiqkLvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7z2d_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH A DNA APTAMER IN COMPLEX WITH RILPIVIRINE organism=? DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 82) GLU89 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) LYS287 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainB prot.sequence vpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfawrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtKalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplTeeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7z2e_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF NNRTI RESISTANT M184I/E138K MUTANT HIV-1 REVERSE TRANSCRIPTASE WITH A DNA APTAMER IN COMPLEX WITH RILPIVIRINE organism=? DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 80) ILE94 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (209) MET230 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (244) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (454) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence vpispietvpvklkpgmdgpklteekikalveictemekegkiskigpenpyntpkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqyiddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >7z2e_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF NNRTI RESISTANT M184I/E138K MUTANT HIV-1 REVERSE TRANSCRIPTASE WITH A DNA APTAMER IN COMPLEX WITH RILPIVIRINE organism=? DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 80) ILE94 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (209) MET230 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (244) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (454) GLN475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainB prot.sequence vpispietvpvklkpgmdgpklteekikalveictemekegkiskigpenpyntpkwrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqyiddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklNwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnQktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkRtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnktpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrWglttpgyelhpdkwtvqpivlpekdswtvndiqkLvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7z2g_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH A DNA APTAMER IN COMPLEX WITH DORAVIRINE organism=? DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 80) GLN91 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ILE94 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 (139) PRO157 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) TYR183 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (212) MET230 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence spietvpvklkpgmdgpkvkqwpkikalveictemekegkiskigpenpyntpvfackkkrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa >7z2g_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH A DNA APTAMER IN COMPLEX WITH DORAVIRINE organism=? DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 80) GLN91 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ILE94 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 (139) PRO157 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) TYR183 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (212) MET230 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence spietvpvklkpgmdgpkvkqwpkikalveictemekegkiskigpenpyntpvfackkkrklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYmddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklvsa/vpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfweVqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfKkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpyElhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7z2h_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF NNRTI RESISTANT M184I/E138K MUTANT HIV-1 REVERSE TRANSCRIPTASE WITH A DNA APTAMER IN COMPLEX WITH DORAVIRINE organism=? DNA sequence DC(E1):DG(E33) OMC(E2):DG(E32) DC(E3):DG(E31) OMC(E4):DG(E30) DC(E5):DG(E29) DC(E6):DG(E28) DC(E7):DG(E27) DT(E8):DA(E26) DT(E9):DA(E25) DC(E10):DG(E24) DG(E11):DC(E23) DG(E12):DC(E22) DT(E13):DA(E21) DG(E14):DC(E20) DC(E15):DG(E19) chainA ( 80) ILE94 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 (161) TYR183 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (208) MET230 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 (243) ASN265 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (244) TRP266 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence spietvpvklkpgmdgpkvkqwpltealveictemekegkiskigpenpyntpvfackklvdfrelnkrtqdfwevqlgIphpaglkkkksvtvldvgdayfsvpldedfrkytaftipiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyqYiddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwMgyelhpdkwtvqpivlpekdswtvndiqklvgklNWasqiypgikvrqlskllrgtlteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyqlekepivgaetfyvdgaanrelgkagyvtnkgrqkvvpltnttnqktelqaiylalqdsglevnivtnsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvdklv/pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikkkdstkwrklvdfrelnkRtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkytaftipsinnktpgiryqynvlpqgwkgspaifqssMtkilepfkkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllRwglttpyelhpdkwtvqpivlpekdswtvndiqkLVgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq >7z2z_ABE:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF YEAST RNA POLYMERASE III-DNA-TY1 INTEGRASE COMPLEX (POL III-DNA-IN1) AT 3.1 A organism=? DNA sequence DC(T1):DG(S52) DG(T2):DC(S51) DC(T3):DG(S50) DT(T4):DA(S49) DC(T5):DG(S48) DT(T6):DA(S47) DG(T7):DC(S46) DC(T8):DG(S45) DT(T9):DA(S44) DC(T10):DG(S43) DC(T11):DG(S42) DT(T12):DA(S41) DT(T13):DA(S40) DC(T14):DG(S39) DT(T15):DA(S38) DC(T16):DG(S37) DC(T17):DG(S36) DT(T18):DA(S35) chainA (1344) ARG1373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 chainB (447) LYS482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainE prot.sequence kevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqrrclhcgalngvvkkaaagagsaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmsneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnpamlpgskpirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavktaetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepgtqmtlktfhfagvasmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpsendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalkan/deintaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeksrKvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsaqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >7z4c_B: title=SPCAS9 BOUND TO 6 NUCLEOTIDE COMPLEMENTARY DNA SUBSTRATE organism=? DNA sequence DT(D-19):DA(C19) DA(D-18):DT(C18) DT(D-17):DA(C17) DG(D-16):DC(C16) DT(D-15):DA(C15) DA(D-14):DT(C14) DG(D-13):DC(C13) DA(D-12):DT(C12) DC(D-11):DG(C11) DT(D-10):DA(C10) DT(D-9):DA(C9) DC(D-8):DG(C8) DA(D-7):DT(C7) DT(D-6):DT(C6) DA(D-5):DC(C5) DT(D-4):DT(C4) DT(D-3):DG(C3) DA(D-2):DC(C2) DT(D-1):DG(C1) DT(D0):DA(C0) DG(D1):DC(C-1) DG(D2):DC(C-2) DA(D3):DT(C-3) DA(D4):DT(C-4) DT(D5):DA(C-5) DC(D6):DG(C-6) DA(D7):DT(C-7) DC(D8):DG(C-8) DG(D9):DC(C-9) chainB ( 64) LYS65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 71) TYR72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (168) LEU169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1098) LYS1107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 (1099) GLU1108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (1210) GLU1219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (1324) ARG1333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 1 0 0 0 0 0 0 0 (1326) ARG1335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 2 0 0 0 0 0 0 prot.sequence dkkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlKrtarrrYtrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfLiegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydvrkmiakseqeigkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKEsilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7z4d_E: title=CRYSTAL STRUCTURE OF SPCAS9 BOUND TO A 10 NUCLEOTIDE COMPLEMENTARY DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DC(H-20):DT(G9) DT(H-19):DA(G8) DA(H-18):DC(G7) DT(H-17):DT(G6) DG(H-16):DC(G5) DT(H-15):DT(G4) DT(H-3):DG(G3) DA(H-2):DC(G2) DT(H-1):DG(G1) DT(H0):DA(G0) DG(H1):DC(G-1) DG(H2):DC(G-2) DA(H3):DT(G-3) DA(H4):DT(G-4) DT(H5):DA(G-5) DC(H6):DG(G-6) DA(H7):DT(G-7) DC(H8):DG(G-8) DG(H9):DC(G-9) chainE (168) LEU169 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) TYR450 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (490) PHE491 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (494) MET495 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (648) MET694 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (819) ASP1012 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (905) LYS1107 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 (906) GLU1108 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1017) GLU1219 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (1130) ASP1332 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (1131) ARG1333 0 0 0 0 0 0 0 0 0 13 12 2 0 0 0 0 0 0 0 (1133) ARG1335 0 0 0 0 0 0 0 0 0 0 11 13 2 0 0 0 0 0 0 prot.sequence dkkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfLiegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripYyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsFierMtnfdknlpnekvlpkhsllyeyftvyneltkqkkaivdllflkedyfkkiecfslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklinirdkqsgktildflksanrnfMqlihdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemaaivpqsflkddsidnkseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygDykvydmiakseqekyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKEsilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttiDRkRytstkevldatlihqsitglyetridlsqlggd >7z4e_B: title=SPCAS9 BOUND TO 8-NUCLEOTIDE COMPLEMENTARY DNA SUBSTRATE organism=? DNA sequence DT(D-19):DA(C19) DA(D-18):DT(C18) DT(D-17):DA(C17) DG(D-16):DC(C16) DT(D-15):DA(C15) DA(D-14):DT(C14) DG(D-13):DC(C13) DA(D-12):DT(C12) DC(D-11):DG(C11) DT(D-10):DA(C10) DT(D-9):DA(C9) DA(D-8):DA(C8) DT(D-3):DC(C7) DA(D-2):DT(C6) DT(D-1):DC(C5) DT(D0):DT(C4) DG(D1):DG(C3) DG(D2):DC(C2) DA(D3):DG(C1) DA(D4):DA(C0) DT(D5):DC(C-1) DC(D6):DC(C-2) DA(D7):DT(C-3) DC(D8):DT(C-4) DG(D9):DA(C-5) chainB (168) LEU169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (449) TYR450 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (1098) LYS1107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 5 3 0 0 0 0 (1099) GLU1108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (1210) GLU1219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (1324) ARG1333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 12 0 0 0 1 0 0 0 0 (1326) ARG1335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 1 0 0 1 1 0 0 prot.sequence dkkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfLiegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripYyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydvrkmiakseqeigkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKEsilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7z4g_B: title=SPCAS9 BOUND TO 12-NUCLEOTIDE COMPLEMENTARY DNA SUBSTRATE organism=? DNA sequence DG(D-21):DC(C21) DC(D-20):DG(C20) DT(D-19):DA(C19) DG(D-18):DC(C18) DC(D-17):DG(C17) DG(D-16):DC(C16) DT(D-15):DA(C15) DA(D-14):DT(C14) DT(D-13):DA(C13) DA(D-2):DT(C12) DT(D-1):DT(C11) DT(D0):DC(C10) DG(D1):DT(C9) DG(D2):DA(C8) DA(D3):DC(C7) DA(D4):DT(C6) DT(D5):DC(C5) DC(D6):DT(C4) DA(D7):DG(C3) DC(D8):DC(C2) DG(D9):DG(C1) chainB ( 71) TYR72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (168) LEU169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (449) TYR450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (490) PHE491 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (494) MET495 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (587) ASN588 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (693) MET694 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (697) HIS698 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (933) LYS1107 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (934) GLU1108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (1045) GLU1219 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (1155) ARG1333 0 0 0 0 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 (1157) ARG1335 0 0 0 0 0 0 0 0 0 0 0 0 14 10 3 0 0 0 0 0 0 prot.sequence dkkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrYtrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfLiegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripYyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsFierMtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfNaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfMqliHddsltfkediqkaqvslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareneldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKEsilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyespedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7z4h_B: title=SPCAS9 BOUND TO 14-NUCLEOTIDE COMPLEMENTARY DNA SUBSTRATE organism=? DNA sequence DC(C-9):DG(D9) DG(C-8):DC(D8) DT(C-7):DA(D7) DG(C-6):DC(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DT(C-3):DA(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DA(C0):DT(D0) DG(C1):DT(D-1) DC(C2):DA(D-2) DG(C3):DT(D-15) DT(C4):DG(D-16) DC(C5):DT(D-17) DT(C6):DA(D-18) DC(C7):DT(D-19) DA(C8):DC(D-20) DT(C9):DG(D-21) chainB ( 71) TYR72 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (168) LEU169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (449) TYR450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (490) PHE491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 (494) MET495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (587) ASN588 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (693) MET694 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 (998) ASP1012 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (1079) LYS1107 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 (1080) GLU1108 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (1191) GLU1219 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (1301) ARG1333 0 0 0 0 0 0 0 0 13 4 0 0 0 0 0 0 0 0 0 (1303) ARG1335 0 0 0 0 0 0 2 10 13 0 0 0 0 0 0 0 0 0 0 prot.sequence dkkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrYtrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfLiegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripYyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsFierMtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfNaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfMqlihddsltfkediqkaqvslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarennsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygDyvrkmiaakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKEsilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyespedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7z4i_B: title=SPCAS9 BOUND TO 16-NUCLEOTIDE COMPLEMENTARY DNA SUBSTRATE organism=? DNA sequence DC(C-9):DG(D9) DG(C-8):DC(D8) DT(C-7):DA(D7) DG(C-6):DC(D6) DA(C-5):DT(D5) DT(C-4):DA(D4) DT(C-3):DA(D3) DC(C-2):DG(D2) DC(C-1):DG(D1) DA(C0):DT(D0) chainB (1080) LYS1107 0 0 0 0 0 0 0 0 5 4 (1192) GLU1219 0 0 0 0 0 0 0 0 4 0 (1305) ASP1332 0 0 0 0 0 0 1 0 0 0 (1306) ARG1333 0 0 0 0 0 0 0 2 15 15 (1308) ARG1335 0 0 0 0 0 0 4 14 7 0 prot.sequence dkkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydkatakyffysnimnffkteitirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttiDRkRytstkevldatlihqsitglyetridlsql >7z4k_B: title=SPCAS9 BOUND TO 10-NUCLEOTIDE COMPLEMENTARY DNA SUBSTRATE organism=? DNA sequence DT(D-19):DA(C11) DG(D-18):DC(C10) DC(D-17):DT(C9) DG(D-16):DA(C8) DT(D-15):DC(C7) DA(D-14):DT(C6) DT(D-13):DC(C5) DT(D-12):DT(C4) DT(D-11):DG(C3) DA(D-2):DC(C2) DT(D-1):DG(C1) DT(D0):DA(C0) DG(D1):DC(C-1) DG(D2):DC(C-2) DA(D3):DT(C-3) DA(D4):DT(C-4) DT(D5):DA(C-5) DC(D6):DG(C-6) DA(D7):DT(C-7) DC(D8):DG(C-8) DG(D9):DC(C-9) chainB (168) LEU169 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG447 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (449) TYR450 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (490) PHE491 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (494) MET495 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1099) LYS1107 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 (1100) GLU1108 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (1211) GLU1219 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (1325) ARG1333 0 0 0 0 0 0 0 0 0 0 0 15 13 1 0 0 0 0 0 0 0 (1327) ARG1335 0 0 0 0 0 0 0 0 0 0 0 0 17 14 1 0 0 0 0 0 0 prot.sequence dkkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfLiegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfRipYyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsFierMtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarenknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdaivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydvrkmiakseqeigkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKEsilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlggd >7z4l_B: title=SPCAS9 BOUND TO 18-NUCLEOTIDE COMPLEMENTARY DNA SUBSTRATE IN THE CHECKPOINT STATE organism=? DNA sequence DT(D0):DA(C0) DG(D1):DC(C-1) DG(D2):DC(C-2) DA(D3):DT(C-3) DA(D4):DT(C-4) DT(D5):DA(C-5) DC(D6):DG(C-6) DA(D7):DT(C-7) DC(D8):DG(C-8) DG(D9):DC(C-9) chainB (1079) LYS1107 6 5 0 0 0 0 0 0 0 0 (1304) ASP1332 0 0 0 1 0 0 0 0 0 0 (1305) ARG1333 12 12 2 0 0 0 0 0 0 0 (1307) ARG1335 0 15 14 2 0 0 0 0 0 0 prot.sequence dkkysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemareknsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdhivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvykatakyffysnimnffkteitirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagelqkgnelalpskyvnflylashyeklkgspedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttiDRkRytstkevldatlihqsitglyetridlsql >7z5a_A:S13-like_H2TH_domain;N-terminal_domain_of_MutM-like_DNA_repair_proteins;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF THE TRAPPED COMPLEX OF MOUSE ENDONUCLEASE VIII- LIKE 3 (MNEIL3) AND HAIRPIN DNA WITH 5'OVERHANG organism=? DNA sequence DA(E8):DT(E18) DC(E9):DG(E17) DG(E10):DC(E16) DC(E11):DG(E15) DG(E12):DA(E14) chainA ( 79) MET99 5 0 0 0 0 (244) ASN270 0 6 2 0 0 (246) ARG272 6 0 0 0 0 prot.sequence mvegpgctlngekirarvlpgqavtgvrgtalqsapmnadsgwkllrlfngyvysgvetlgkelfmyfghralrihfgMkgsilinprgaspalavqltrdlicfydssvelrnsvesqqrvremeeldicspkfsfsraesevkkqgdrmlcdvlldqrvlpgvgniiknealfdsglhpavkvcqlsdkqarhlvkmtrdfsilfyrcckagsaiskhckvykrpncgqchskitvcrfgeNsRmtyfcphcqkdglevlfq >7z5i_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=TRANSCRIPTION FACTOR MYF5 BOUND TO SYMMETRICAL SITE organism=Homo sapiens DNA sequence DG(E1):DC(F18) DC(E2):DG(F17) DG(E3):DC(F16) DC(E4):DG(F15) DG(E5):DC(F14) DT(E6):DA(F13) DC(E7):DG(F12) DA(E8):DT(F11) DG(E9):DC(F10) DC(E10):DG(F9) DT(E11):DA(F8) DG(E12):DC(F7) DA(E13):DT(F6) DC(E14):DG(F5) DG(E15):DC(F4) DC(E16):DG(F3) DG(E17):DC(F2) DT(E18):DA(F1) chainA ( 9) THR89 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 11) ARG91 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) GLU92 0 0 0 0 0 1 6 9 5 0 0 0 0 0 0 0 0 0 ( 15) ARG95 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 chainB ( 9) THR89 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 11) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 13 13 0 0 0 ( 12) GLU92 0 0 0 0 0 0 0 0 0 5 10 8 2 0 0 0 0 0 ( 15) ARG95 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 prot.sequence smdrrkaaTmRErrRlkkvnqafetlkrctttnpnqrlpkveilrnairyieslqe/smdrrkaaTmRErrRlkkvnqafetlkrctttnpnqrlpkveilrnairyieslqe >7z5i_B:HLH,_helix-loop-helix_DNA-binding_domain; title=TRANSCRIPTION FACTOR MYF5 BOUND TO SYMMETRICAL SITE organism=Homo sapiens DNA sequence DA(F1):DT(E18) DC(F2):DG(E17) DG(F3):DC(E16) DC(F4):DG(E15) DG(F5):DC(E14) DT(F6):DA(E13) DC(F7):DG(E12) DA(F8):DT(E11) DG(F9):DC(E10) DC(F10):DG(E9) DT(F11):DA(E8) DG(F12):DC(E7) DA(F13):DT(E6) DC(F14):DG(E5) DG(F15):DC(E4) DC(F16):DG(E3) DG(F17):DC(E2) DC(F18):DG(E1) chainB ( 9) THR89 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 11) ARG91 0 0 0 13 13 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) GLU92 0 0 0 0 0 2 8 10 5 0 0 0 0 0 0 0 0 0 ( 15) ARG95 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smdrrkaaTmRErrRlkkvnqafetlkrctttnpnqrlpkveilrnairyieslqe >7z5k_AB:HLH,_helix-loop-helix_DNA-binding_domain; title=TRANSCRIPTION FACTOR MYF5 BOUND TO NON-SYMMETRICAL SITE organism=Homo sapiens DNA sequence DG(E1):DC(F18) DC(E2):DG(F17) DG(E3):DC(F16) DC(E4):DG(F15) DA(E5):DT(F14) DA(E6):DT(F13) DC(E7):DG(F12) DA(E8):DT(F11) DG(E9):DC(F10) DC(E10):DG(F9) DT(E11):DA(F8) DG(E12):DC(F7) DA(E13):DT(F6) DC(E14):DG(F5) DG(E15):DC(F4) DC(E16):DG(F3) DG(E17):DC(F2) DT(E18):DA(F1) chainA ( 5) ARG85 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 ( 9) THR89 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 11) ARG91 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) GLU92 0 0 0 0 0 1 9 7 2 0 0 0 0 0 0 0 0 0 ( 15) ARG95 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 chainB ( 4) ARG85 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 ( 8) THR89 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 10) ARG91 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 ( 11) GLU92 0 0 0 0 0 0 0 0 0 3 10 9 3 0 0 0 0 0 ( 14) ARG95 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 prot.sequence smdrRkaaTmRErrRlkkvnqafetlkrctttnpnqrlpkveilrnairyieslqe/mdrRkaaTmRErrRlkkvnqafetlkrctttnpnqrlpkveilrnairyieslqel >7z5k_B:HLH,_helix-loop-helix_DNA-binding_domain; title=TRANSCRIPTION FACTOR MYF5 BOUND TO NON-SYMMETRICAL SITE organism=Homo sapiens DNA sequence DA(F1):DT(E18) DC(F2):DG(E17) DG(F3):DC(E16) DC(F4):DG(E15) DG(F5):DC(E14) DT(F6):DA(E13) DC(F7):DG(E12) DA(F8):DT(E11) DG(F9):DC(E10) DC(F10):DG(E9) DT(F11):DA(E8) DG(F12):DC(E7) DT(F13):DA(E6) DT(F14):DA(E5) DG(F15):DC(E4) DC(F16):DG(E3) DG(F17):DC(E2) DC(F18):DG(E1) chainB ( 4) ARG85 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 0 0 ( 8) THR89 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 10) ARG91 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) GLU92 0 0 0 0 0 3 9 10 3 0 0 0 0 0 0 0 0 0 ( 14) ARG95 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdrRkaaTmRErrRlkkvnqafetlkrctttnpnqrlpkveilrnairyieslqel >7z6h_DEFG:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF DNA-BOUND HUMAN RAD17-RFC CLAMP LOADER AND 9-1-1 CHECKPOINT CLAMP organism=HOMO SAPIENS DNA sequence DA(X68) DC(X67) DA(X66) DG(X65) DT(X64) DT(X63) DG(X62) DT(X61) DC(X58) DG(X57) DA(X46) DT(X47) DA(X48) DT(X49) DA(X50) DC(X51) DG(X52) DG(X53) DG(X54) DC(X55):DG(X57) DT(X56) chainD chainE ( 99) ASN102 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG prot.sequence vpwvekyrpkcvdevafqeevvavlkkslegadlpnllfygppgtgktstilaaarelfgpelfrlrvlelnasdergiqvvrekvknfaqltvsgsrsdgkpcppfkivildeadsmtsaaqaalrrtmekeskttrfclicnyvsriiepltsrcskfrfkplsdkiqqqrlldiakkenvkisdegiaylvkvsegdlrkaitflqsatrltggkeitekvitdiagvipaekidgvfaacqsgsfdkleavvkdlideghaatqlvnqlhdvvvennlsdkqksiiteklaevdkcladgadehlqlislcatvmqqlsq/wvdkyrpcslgrldyhkeqaaqlrnlvqcgdfphllvygpsgagkktrimcilrelygvgveklriehqtittpskkkieistiasnyhlevnpsdagNsdrvviqemlktvaqsrdfkvvlltevdkltkdaqhalrrtmekymstcrlilccnstskvippirsrclavrvpapsiedichvlstvckkeglnlpsqlahrlaekscrnlrkallmceacrvqqypftadqeipetdwevylretanaivsqqtpqrllevrgrlyellthcippeiimkgllsellhncdgqlkgevaqmaayyehrlqlgskaiyhleafvakfmalykkfmed/elpwvekyrpvklneivgnedtvsrlevfaregnvpniiiagppgtgkttsilclarallgpalkdamlelnasndrgidvvrnkikmfaqqkvtlpkGrhkiiildeadsmtdgaqqalrrtmeiyskttrfalacnasdkiiepiqsrcavlrytkltdaqiltrlmnviekervpytddgleaiiftaqgdmrqalnnlqstfsgfgfinsenvfkvcdephpllvkemiqhcvnanideaykilahlwhlgyspediignifrvcktfqmaeylklefikeigythmkiaegvnsllqmagllarlcqktm/lpwvekyrpqtlndlishqdilstiqkfinedrlphlllygppgtgktstilacakqlykdkefgsmvlelnasddrgidiirgpilsfastrtifkkGfklvildeadamtqdaqnalrrviekftentrfclicnylskiipalqsrctrfrfgpltpelmvprlehvveeekvdisedgmkalvtlssgdmrralnilqstnmafgkvteetvytctghplksdianildwmlnqdfttayrnitelktlkglalhdilteihlfvhrvdfpssvrihlltkmadieyrlsvgtnekiqlssliaafqvtrdli >7z6h_K:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF DNA-BOUND HUMAN RAD17-RFC CLAMP LOADER AND 9-1-1 CHECKPOINT CLAMP organism=HOMO SAPIENS DNA sequence DC(Y1):DG(X54) DC(Y2):DG(X53) DC(Y3):DG(X52) DG(Y4):DC(X51) DT(Y5):DA(X50) DA(Y6):DT(X49) DT(Y7):DA(X48) DA(Y8):DT(X47) DT(Y9):DA(X46) chainK (249) PHE395 3 0 0 0 0 0 0 0 0 (251) PHE397 11 0 0 0 0 0 0 0 0 (252) ARG398 5 0 0 0 0 0 0 0 0 (259) TYR405 2 0 0 0 0 0 0 0 0 (375) PHE521 0 23 12 0 0 0 0 0 0 (377) PRO523 1 1 0 0 0 0 0 0 0 (378) LEU524 2 0 0 0 0 0 0 0 0 prot.sequence enepwvdkykpetqhelavhkkkieevetwlkaqvlerqpkqggsillitgppgcgktttlkilskehgiqvqewinpvlpyqsqiavfkefllratkynklqmlgddlrtdkkiilvedlpnqfyrdshtlhevlrkyvrigrcplifiisdslsgdnnqrllfpkeiqeecsisnisfnpvaptimmkflnrivtieanknggkitvpdktslellcqgcsgdirsainslqfssskaiggkdvslFlFRalgkilYckraslteldsprlpshlseyerdtllvepeevvemshmpgdlfnlylhqnyidffmeiddivraseflsfadilsgdwntrsllreystsiatrgvmhsnkargyahcqgggssFrPLhkpqwflinkkyrenclaakalfpdlclqtqllpylalltipmrnqaqisfiqdigrlplk >7z6o_A:SPOC_domain-like;vWA-like; title=X-RAY STUDIES OF KU70/80 REVEAL THE BINDING SITE FOR IP6 organism=? DNA sequence DG(C1):DC(D34) DT(C2):DA(D33) DT(C3):DA(D32) DT(C4):DA(D31) DT(C5):DA(D30) DT(C6):DA(D29) DA(C7):DT(D28) DG(C8):DC(D27) DT(C9):DA(D26) DT(C10):DA(D25) DT(C11):DA(D24) DA(C12):DT(D23) DT(C13):DA(D22) chainA (221) ARG254 0 1 1 0 0 0 0 0 0 0 0 0 0 prot.sequence grdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy >7z6o_AB:SPOC_domain-like;vWA-like; title=X-RAY STUDIES OF KU70/80 REVEAL THE BINDING SITE FOR IP6 organism=? DNA sequence DA(D22):DT(C13) DT(D23):DA(C12) DA(D24):DT(C11) DA(D25):DT(C10) DA(D26):DT(C9) DC(D27):DG(C8) DT(D28):DA(C7) DA(D29):DT(C6) DA(D30):DT(C5) DA(D31):DT(C4) DA(D32):DT(C3) DA(D33):DT(C2) DC(D34):DG(C1) chainA (221) ARG254 0 0 0 0 0 0 0 0 0 0 1 1 0 chainB (391) ARG400 5 2 11 3 0 0 0 0 0 0 0 0 0 prot.sequence grdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslgkedgsggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkk >7z7n_D:TATA-box_binding_protein-like; title=MOT1E1434Q:TBP:DNA - SUBSTRATE RECOGNITION STATE organism=? DNA sequence DG(B1):DC(A36) DC(B2):DG(A35) DC(B3):DG(A34) DC(B4):DG(A33) DT(B5):DA(A32) DT(B6):DA(A31) DT(B7):DA(A30) DT(B8):DA(A29) DA(B9):DT(A28) DT(B10):DA(A27) DA(B11):DT(A26) DG(B12):DC(A25) DG(B13):DC(A24) DC(B14):DG(A23) DC(B15):DG(A22) DG(B16):DC(A21) DC(B17):DG(A20) DC(B18):DG(A19) DA(B19):DT(A18) DT(B20):DA(A17) DG(B21):DC(A16) DC(B22):DG(A15) DC(B23):DG(A14) DG(B24):DC(A13) DG(B25):DC(A12) DG(B26):DC(A11) DC(B27):DG(A10) DG(B28):DC(A9) DC(B29):DG(A8) DC(B30):DG(A7) DC(B31):DG(A6) DG(B32):DC(A5) DG(B33):DC(A4) DC(B34):DG(A3) DC(B35):DG(A2) DG(B36):DC(A1) chainD ( 9) ASN84 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL86 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE114 0 0 0 7 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA115 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU129 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE131 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL137 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN174 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL176 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE205 0 0 0 0 0 0 0 0 0 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO206 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU220 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE222 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL228 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR230 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgitptlqNiVatvnldcrldlktialharnaeynpkrFAavimrirepkttaLiFasgkmVvtgakseddsklasrkyariiqklgfnakftdfkiqNiVgscdikfpirleglaskhhnfssyepelFPgliyrmikpkivlLiFvsgkiVlTgakvreeiyqafemiypvlqdfr >7z7n_DE:TATA-box_binding_protein-like;ARM_repeat;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MOT1E1434Q:TBP:DNA - SUBSTRATE RECOGNITION STATE organism=? DNA sequence DC(A1):DG(B36) DG(A2):DC(B35) DG(A3):DC(B34) DC(A4):DG(B33) DC(A5):DG(B32) DG(A6):DC(B31) DG(A7):DC(B30) DG(A8):DC(B29) DC(A9):DG(B28) DG(A10):DC(B27) DC(A11):DG(B26) DC(A12):DG(B25) DC(A13):DG(B24) DG(A14):DC(B23) DG(A15):DC(B22) DC(A16):DG(B21) DA(A17):DT(B20) DT(A18):DA(B19) DG(A19):DC(B18) DG(A20):DC(B17) DC(A21):DG(B16) DG(A22):DC(B15) DG(A23):DC(B14) DC(A24):DG(B13) DC(A25):DG(B12) DT(A26):DA(B11) DA(A27):DT(B10) DT(A28):DA(B9) DA(A29):DT(B8) DA(A30):DT(B7) DA(A31):DT(B6) DA(A32):DT(B5) DG(A33):DC(B4) DG(A34):DC(B3) DG(A35):DC(B2) DC(A36):DG(B1) chainD ( 9) ASN84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 ( 11) VAL86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 39) PHE114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 7 0 0 0 ( 40) ALA115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 ( 54) LEU129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 56) PHE131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 ( 62) VAL137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 99) ASN174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 (101) VAL176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 (130) PHE205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 0 0 0 0 0 0 0 0 0 (131) PRO206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (145) LEU220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (147) PHE222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (153) VAL228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (155) THR230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 chainE prot.sequence sgitptlqNiVatvnldcrldlktialharnaeynpkrFAavimrirepkttaLiFasgkmVvtgakseddsklasrkyariiqklgfnakftdfkiqNiVgscdikfpirleglaskhhnfssyepelFPgliyrmikpkivlLiFvsgkiVlTgakvreeiyqafemiypvlqdfr/atrldrlvTiLetgstrlirdtavnqladwqkqhpeelFNllsrvvpylrhkdWeTrttaaKaigkiienaplydpnnffrlesldvativkygrpllRgGpvdynlaaldpqkrlahlkktlngrlglLGrvfedeempgaewPfErlcefLkVdlfdpqwetrhgaamglrevirvhgagagrrrgktrkenndlnrqwlddlayrllcvlmldkftdyssdtsvapiretvgqtlgavlrhisvesvhaiyrllycmvtgmvglryvvavrkdlllqdgdmidgvvrcvmqglgdidddvrsvsaatlipmakefvmmrrsaldslinivweslsnlgddlsastgkimdllatlcsfpevleamkvsasqdeersftllvprlypflrhtitsvrlavlkalmtfanlggetsqgwlngrilrlifqniiverdqdtlnmslelwttlvrrlaardpailadefeahaepmmqlalhpigvprhpipmnpalfqkpvdghmiqgevdlvgvdvlirsrisaakamglimsfiptprlasydtavlqalsspyastqlaaamvideyakncstpevasrfieplqkiidlerpshyrdlvtyvqrvrsasqqlinlfrdhgkvsqgklptlavvvqgepeagpgafsianaekvvnedferlkrlmapgqrlialpqlneareqtvevieeakaakeardarikaaaacalvamkvlpkkpsplikaimdsikteenqelqsrsaatiarlvqlftesgrrgpaekvvanlvkfscvevaetpefpihahktnvilsmqkeedrvdhpdavkyareakaaritrrgakealeilsknfgaellervptlrtfmeeplvrafsgdlppeardpenafgqeivdamsvirtmtptlhpalhpfvmqqvplvikalrsdlsvfrymaakcmaticsvitvdgmtalvekvlpsinnpldlsfrqgaieviyhliavmgdailpyviflivpvlgrmsdsdnqirliattsfatlvklvpleagipdppglseellkgrdrertfiaqlldpkkiepfkipvaikaelrsyqqegvnwlaflnkyhlhgilcddmglgktlqticivasdhhqraeefartgapevrklpsliicpptlsghwqqeiktyapfltvtayvgspaerramkdsldktdivitsydvcrndidviekynwnycvldqghliknpkakitlavkrltsnhrliltgtpiqnnvlelwslfdflmpgflgaekvfldrfakpiansryskasskeqeagalaiealhkqvlpfllrrlkee >7z87_ABC:SPOC_domain-like;vWA-like;Protein_kinase-like_PK-like;ARM_repeat;C-terminal_domain_of_Ku80; title=DNA-PK IN THE ACTIVE STATE organism=? DNA sequence DA(E18):DT(D26) DA(E19):DT(D25) DT(E20):DA(D24) DG(E21):DC(D23) DT(E22):DA(D22) DT(E23):DA(D21) DC(E24):DG(D20) DC(E25):DG(D19) DA(E26):DT(D18) DG(E27):DC(D17) DC(E28):DG(D16) DG(E29):DC(D15) DG(E30):DC(D14) DA(E31):DT(D13) DA(E32):DT(D12) DT(E33):DA(D11) DC(E34):DG(D10) DG(E35):DC(D9) DG(E36):DC(D8) DC(E37):DG(D7) DA(E38):DT(D6) DG(E39):DC(D5) DC(E40):DG(D4) DG(E41):DC(D3) DG(E42):DC(D2) DG(E43):DC(D1) chainA (258) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 3 0 0 0 0 0 0 (2391) GLN2736 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (2394) LEU2739 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 (2395) SER2740 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 (2398) TYR2743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 50 (2399) ALA2744 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 chainB (210) ARG254 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (385) ARG400 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvgkwkvptykdyvdlfrhllssdqmmdsilaseslnhllydefvksvlkivekldltdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsalsdetknnwevsalsraaqkgfnkvvlkhlkktknlssneaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgqclpsldlsckqlasgllelafafgglcerlvslllnpavlstavihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevstlseemsqfdfstgvqelemdelnrhecmapltalvkhmhrslprdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehpmrdQekLSlmYArkgvaeqkrekeikselkmkqdaqvdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltpdisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrileedsekviaglyqrafqhlseavqaaeeaagvidaymtladfcdqqlrkeeenasvidsaelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/kysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeifqaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkfladvddlldmi >7z87_C:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=DNA-PK IN THE ACTIVE STATE organism=? DNA sequence DA(E18):DT(D26) DA(E19):DT(D25) DT(E20):DA(D24) DG(E21):DC(D23) DT(E22):DA(D22) DT(E23):DA(D21) DC(E24):DG(D20) DC(E25):DG(D19) DA(E26):DT(D18) DG(E27):DC(D17) DC(E28):DG(D16) DG(E29):DC(D15) DG(E30):DC(D14) DA(E31):DT(D13) DA(E32):DT(D12) DT(E33):DA(D11) DC(E34):DG(D10) DG(E35):DC(D9) DG(E36):DC(D8) DC(E37):DG(D7) DA(E38):DT(D6) DG(E39):DC(D5) DC(E40):DG(D4) DG(E41):DC(D3) DG(E42):DC(D2) DG(E43):DC(D1) chainC (385) ARG400 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeifqaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkfladvddlldmi >7z88_ABC:SPOC_domain-like;vWA-like;Protein_kinase-like_PK-like;ARM_repeat;C-terminal_domain_of_Ku80; title=DNA-PK IN THE INTERMEDIATE STATE organism=? DNA sequence DA(E19):DT(D25) DT(E20):DA(D24) DG(E21):DC(D23) DT(E22):DA(D22) DT(E23):DA(D21) DC(E24):DG(D20) DC(E25):DG(D19) DA(E26):DT(D18) DG(E27):DG(D16) DC(E28):DC(D15) DG(E30):DC(D14) DA(E31):DT(D13) DA(E32):DT(D12) DT(E33):DA(D11) DC(E34):DG(D10) DG(E35):DC(D9) DG(E36):DC(D8) DC(E37):DG(D7) DA(E38):DT(D6) DG(E39):DC(D5) DC(E40):DG(D4) chainA chainB ( 2) TYR32 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (210) ARG254 0 0 0 0 0 0 0 0 1 3 13 0 0 0 0 0 0 0 0 0 0 chainC (385) ARG400 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkryavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpkwkvptykdyvdlfrhllssdqmmdsilaslnhllydefvksvlkivekldltleiqtmiptsdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegkyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylkevsalsraaqkgfnkvvlkhlkkteaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqppmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgpsldlsckqlasgllelafafgglcerlvslllnpavlstahfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevstlseemsqfdfstgelemdelnrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehpqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltdisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrileldsekviaglyqrafqhlseavqaaagvidaymtladfcdqqlrkeeeqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/kYsgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeifqaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkfladvddlldmi >7z88_C:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=DNA-PK IN THE INTERMEDIATE STATE organism=? DNA sequence DC(D1):DG(E43) DC(D2):DG(E42) DC(D3):DG(E41) DG(D4):DC(E40) DC(D5):DG(E39) DT(D6):DA(E38) DG(D7):DC(E37) DC(D8):DG(E36) DC(D9):DG(E35) DG(D10):DC(E34) DA(D11):DT(E33) DT(D12):DA(E32) DT(D13):DA(E31) DC(D14):DG(E30) DC(D15):DG(E29) DG(D16):DC(E28) DC(D17):DG(E27) DT(D18):DA(E26) DG(D19):DC(E25) DG(D20):DC(E24) DA(D21):DT(E23) DA(D22):DT(E22) DC(D23):DG(E21) DA(D24):DT(E20) DT(D25):DA(E19) DT(D26):DA(E18) chainC (385) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeifqaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkfladvddlldmi >7z8s_E:ARM_repeat;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MOT1:TBP:DNA - POST HYDROLYSIS STATE organism=? DNA sequence DG(B1):DC(A36) DC(B2):DG(A35) DC(B3):DG(A34) DC(B4):DG(A33) DT(B5):DA(A32) DT(B6):DA(A31) DT(B7):DA(A30) DT(B8):DA(A29) DA(B9):DT(A28) DT(B10):DA(A27) DA(B11):DT(A26) DG(B12):DC(A25) DG(B13):DC(A24) DC(B14):DG(A23) DC(B15):DG(A22) DG(B16):DC(A21) DC(B17):DG(A20) DC(B18):DG(A19) DA(B19):DT(A18) DT(B20):DA(A17) DG(B21):DC(A16) DC(B22):DG(A15) DC(B23):DG(A14) DG(B24):DC(A13) DG(B25):DC(A12) DG(B26):DC(A11) DC(B27):DG(A10) DG(B28):DC(A9) DC(B29):DG(A8) DC(B30):DG(A7) DC(B31):DG(A6) DG(B32):DC(A5) DG(B33):DC(A4) DC(B34):DG(A3) DC(B35):DG(A2) DG(B36):DC(A1) chainE (1279) HIS1586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1281) PHE1588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1284) LEU1591 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence atrldrlvtiletgstrlirdtavnqladwqkqhpeelfnllsrvvpylrhkdwetrttaakaigkiienaplydpnaewpferlceflkvdlfdpqwetrhgaamglrevirvhgagagrrrgktrkenndlnrqwlddlayrllcvlmldkftdyssdtsvapiretvgqtlgavlrhisvesvhaiyrllycmvthggmvglryvvavrkdlllqdgdmidgvvrcvmqglgdidddvrsvsaatlipmakefvmmrrsaldslinivweslsnlgddlsastgkimdllatlcsfpevleamkvsasqdeersftllvprlypflrhtitsvrlavlkalmtfanlggetsqgwlngrilrlifqniiverdqdtlnmslelwttlvrrlaardpailadefeahaepmmqlalhpigvprhpipmnpalfqkpsggvdghmiqgevdlvgvdvlirsrisaakamglimsfiptprlasydtavlqalsspyastqlaaamvideyakncstpevasrfieplqkiidlerpshyrdlvtyvqrvrsasqqlinlfrdhgkvsqgklptlavvvqgepeagpgafsianaekvvnedferlkrlmapgqrlialpqlneareqtvevieeakaakeardarikaaaacalvamkvlpkkpsplikaimdsikteenqelqsrsaatiarlvqlftesgrrgpaekvvanlvkfscvevaetpefpihahktnvilsmqkeedrvdhpdavkyareakaaritrrgakealeilsknfgaellervptlrtfmeeplvrafsgdlppeardpenafgqeivdamsvirtmtptlhpalhpfvmqqvplvikalrsdlsvfrymaakcmaticsvitvdgmtalvekvlpsinnpldlsfrqgaieviyhliavmgdailpyviflivpvlgrmsdsdnqirliattsfatlvklvpleagipdppglseellkgrdrertfiaqlldpkkiepfkipvaikaelrsyqqegvnwlaflnkyhlhgilcddmglgktlqticivasdhhqraeefartgapevrklpsliicpptlsghwqqeiktyapfltvtayvgspaerramkdsldktdivitsydvcrndidviekynwnycvldeghliknpkakitlavkrltsnhrliltgtpiqnnvlelwslfdflmpgflgaekvfldrfakpiansryskasskeqeagalaiealhkqvlpfllrrlkeevlndlppkilqnyycdlsdlqrklfedftkrHiFqaLqymrklcnihapklgalrdllvdcgigvephralifcqmkemldmvqntvlkqmlpsvsylrldgsveankrqdivnkfnsdpsydvlllttsvgglglnltgadtvifvehdwnpqkdlqamdrahrigqkkvvnvyriitrgtleekilslqrfkidvastvvnqqnaglatmdtdqildledmvdietgdvrrpgkkaawleglgelwdnaqyeesfdldgflktmq >7z9c_AB:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E.COLI GYRASE HOLOCOMPLEX WITH 217 BP DNA AND ALBICIDIN organism=? DNA sequence DA(G16):DT(H17) DC(G18):DG(H15) DA(G19):DT(E14) DC(G20):DG(E13) DC(G21):DG(E12) DC(G22):DG(E11) DG(G23):DC(E10) DC(G24):DG(E9) DA(G25):DT(E8) DC(G26):DG(E7) DA(G27):DT(E6) DG(G28):DC(E5) DA(G29):DT(E4) DT(G30):DA(E3) DT(G31):DA(E2) DT(G32):DA(E1) chainA ( 76) SER83 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE174 0 0 0 0 0 11 14 0 0 0 0 0 0 0 0 0 chainB ( 43) LYS447 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) LYS449 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdSavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamrteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/gkladcqerdpalselylvegdsaggsakqgrnrknqailplKgKilnvekarfdkmlssqevatlitalgcgigrdeynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprrafieenalkaanidien >7z9c_C:Type_II_DNA_topoisomerase; title=E.COLI GYRASE HOLOCOMPLEX WITH 217 BP DNA AND ALBICIDIN organism=? DNA sequence DA(F1):DT(H32) DG(F2):DC(H31) DA(F3):DT(H30) DA(F4):DT(H29) DT(F5):DA(H28) DC(F6):DG(H27) DA(F7):DT(H26) DG(F8):DC(H25) DG(F9):DC(H24) DC(F10):DG(H23) DA(F11):DT(H22) DT(F12):DA(H21) DA(F13):DT(H20) DA(F14):DT(H19) chainC ( 25) ARG32 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (166) ILE174 0 0 0 0 0 0 0 0 0 17 10 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgRalpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamrteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan >7z9c_CD:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E.COLI GYRASE HOLOCOMPLEX WITH 217 BP DNA AND ALBICIDIN organism=? DNA sequence DA(F1):DT(H32) DG(F2):DC(H31) DA(F3):DT(H30) DA(F4):DT(H29) DT(F5):DA(H28) DC(F6):DG(H27) DA(F7):DT(H26) DG(F8):DC(H25) DG(F9):DC(H24) DC(F10):DG(H23) DA(F11):DT(H22) DT(F12):DA(H21) DA(F13):DT(H20) DA(F14):DT(H19) chainC ( 25) ARG32 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (166) ILE174 0 0 0 0 0 0 0 0 0 17 10 0 0 0 chainD ( 45) LYS449 0 0 0 0 0 0 0 0 0 0 0 1 2 2 prot.sequence itpvnieeelkssyldyamsvivgRalpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamrteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/gkladcqerdpalselylvegdsaggsakqgrnrknqailplkgKilnvekarfdkmlssqevatlitalgcgigrdeynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprrafieenalkaanidien >7z9g_A:Type_II_DNA_topoisomerase; title=E.COLI GYRASE HOLOCOMPLEX WITH 217 BP DNA AND ALBI-2 organism=? DNA sequence DA(E1):DT(G32) DA(E2):DT(G31) DA(E3):DT(G30) DT(E4):DA(G29) DC(E5):DG(G28) DT(E6):DA(G27) DG(E7):DC(G26) DT(E8):DA(G25) DG(E9):DC(G24) DC(E10):DG(G23) DG(E11):DC(G22) DG(E12):DC(G21) DG(E13):DC(G20) DT(E14):DA(G19) DG(H15):DC(G18) DT(H17):DA(G16) chainA ( 75) ASP82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 76) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (112) ALA119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (166) ILE174 0 0 0 0 0 0 0 0 0 14 11 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgDSavydtivrmaqpfslrymlvdgqgnfgsidgdsaaAmrteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan >7z9g_AB:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E.COLI GYRASE HOLOCOMPLEX WITH 217 BP DNA AND ALBI-2 organism=? DNA sequence DA(G16):DT(H17) DC(G18):DG(H15) DA(G19):DT(E14) DC(G20):DG(E13) DC(G21):DG(E12) DC(G22):DG(E11) DG(G23):DC(E10) DC(G24):DG(E9) DA(G25):DT(E8) DC(G26):DG(E7) DA(G27):DT(E6) DG(G28):DC(E5) DA(G29):DT(E4) DT(G30):DA(E3) DT(G31):DA(E2) DT(G32):DA(E1) chainA ( 75) ASP82 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) SER83 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) ALA119 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE174 0 0 0 0 0 11 14 0 0 0 0 0 0 0 0 0 chainB ( 43) LYS447 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) LYS449 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgDSavydtivrmaqpfslrymlvdgqgnfgsidgdsaaAmrteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/gkladcqerdpalselylvegdsaggsakqgrnrknqailplKgKilnvekarfdkmlssqevatlitalgcgigrdeynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprrafieenalkaanidien >7z9g_CD:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E.COLI GYRASE HOLOCOMPLEX WITH 217 BP DNA AND ALBI-2 organism=? DNA sequence DT(H19):DA(F14) DT(H20):DA(F13) DA(H21):DT(F12) DT(H22):DA(F11) DG(H23):DC(F10) DC(H24):DG(F9) DC(H25):DG(F8) DT(H26):DA(F7) DG(H27):DC(F6) DA(H28):DT(F5) DT(H29):DA(F4) DT(H30):DA(F3) DC(H31):DG(F2) DT(H32):DA(F1) chainC ( 25) ARG32 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (166) ILE174 0 0 0 11 14 0 0 0 0 0 0 0 0 0 chainD ( 45) LYS449 2 5 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgRalpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamrteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/gkladcqerdpalselylvegdsaggsakqgrnrknqailplkgKilnvekarfdkmlssqevatlitalgcgigrdeynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprrafieenalkaanidien >7z9k_AB:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E.COLI GYRASE HOLOCOMPLEX WITH 217 BP DNA AND ALBI-1 (SITE TG) organism=? DNA sequence DA(E1):DT(G32) DA(E2):DT(G31) DA(E3):DT(G30) DT(E4):DA(G29) DC(E5):DG(G28) DT(E6):DA(G27) DG(E7):DC(G26) DT(E8):DA(G25) DG(E9):DC(G24) DC(E10):DG(G23) DG(E11):DC(G22) DG(E12):DC(G21) DG(E13):DC(G20) DT(E14):DA(G19) DG(H15):DC(G18) DT(H17):DA(G16) chainA ( 75) ASP82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 76) SER83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (166) ILE174 0 0 0 0 0 0 0 0 0 15 12 0 0 0 0 0 chainB ( 43) LYS447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 45) LYS449 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgDSavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamrteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/gkladcqerdpalselylvegdsaggsakqgrnrknqailplKgKilnvekarfdkmlssqevatlitalgcgigrdeynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprrafieenalkaanidien >7z9k_C:Type_II_DNA_topoisomerase; title=E.COLI GYRASE HOLOCOMPLEX WITH 217 BP DNA AND ALBI-1 (SITE TG) organism=? DNA sequence DA(F1):DT(H32) DG(F2):DC(H31) DA(F3):DT(H30) DA(F4):DT(H29) DT(F5):DA(H28) DC(F6):DG(H27) DA(F7):DT(H26) DG(F8):DC(H25) DG(F9):DC(H24) DC(F10):DG(H23) DA(F11):DT(H22) DT(F12):DA(H21) DA(F13):DT(H20) DA(F14):DT(H19) chainC ( 25) ARG32 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 77) ALA84 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (166) ILE174 0 0 0 0 0 0 0 0 0 15 9 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgRalpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsAvydtivrmaqpfslrymlvdgqgnfgsidgdsaaamrteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan >7z9k_CD:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E.COLI GYRASE HOLOCOMPLEX WITH 217 BP DNA AND ALBI-1 (SITE TG) organism=? DNA sequence DT(H19):DA(F14) DT(H20):DA(F13) DA(H21):DT(F12) DT(H22):DA(F11) DG(H23):DC(F10) DC(H24):DG(F9) DC(H25):DG(F8) DT(H26):DA(F7) DG(H27):DC(F6) DA(H28):DT(F5) DT(H29):DA(F4) DT(H30):DA(F3) DC(H31):DG(F2) DT(H32):DA(F1) chainC ( 25) ARG32 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 77) ALA84 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE174 0 0 0 9 15 0 0 0 0 0 0 0 0 0 chainD ( 45) LYS449 2 3 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgRalpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsAvydtivrmaqpfslrymlvdgqgnfgsidgdsaaamrteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/gkladcqerdpalselylvegdsaggsakqgrnrknqailplkgKilnvekarfdkmlssqevatlitalgcgigrdeynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprrafieenalkaanidien >7z9m_AB:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E.COLI GYRASE HOLOCOMPLEX WITH 217 BP DNA AND ALBI-1 (SITE AA) organism=? DNA sequence DA(G16):DT(H17) DC(G18):DG(H15) DA(G19):DT(E14) DC(G20):DG(E13) DC(G21):DG(E12) DC(G22):DG(E11) DG(G23):DC(E10) DC(G24):DG(E9) DA(G25):DT(E8) DC(G26):DG(E7) DA(G27):DT(E6) DG(G28):DC(E5) DA(G29):DT(E4) DT(G30):DA(E3) DT(G31):DA(E2) DT(G32):DA(E1) chainA ( 75) ASP82 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) SER83 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ILE174 0 0 0 0 0 12 14 0 0 0 0 0 0 0 0 0 chainB ( 43) LYS447 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) LYS449 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgralpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgDSavydtivrmaqpfslrymlvdgqgnfgsidgdsaaamrteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/gkladcqerdpalselylvegdsaggsakqgrnrknqailplKgKilnvekarfdkmlssqevatlitalgcgigrdeynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprrafieenalkaanidien >7z9m_C:Type_II_DNA_topoisomerase; title=E.COLI GYRASE HOLOCOMPLEX WITH 217 BP DNA AND ALBI-1 (SITE AA) organism=? DNA sequence DG(F2):DC(H31) DA(F3):DT(H30) DA(F4):DT(H29) DT(F5):DA(H28) DC(F6):DG(H27) DA(F7):DT(H26) DG(F8):DC(H25) DG(F9):DC(H24) DC(F10):DG(H23) DA(F11):DT(H22) DT(F12):DA(H21) DA(F13):DT(H20) DA(F14):DT(H19) chainC ( 25) ARG32 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 77) ALA84 0 0 0 0 0 0 0 0 0 0 0 1 0 (166) ILE174 0 0 0 0 0 0 0 0 12 9 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgRalpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsAvydtivrmaqpfslrymlvdgqgnfgsidgdsaaamrteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan >7z9m_CD:Type_II_DNA_topoisomerase;GyrA/ParC_C-terminal_domain-like; title=E.COLI GYRASE HOLOCOMPLEX WITH 217 BP DNA AND ALBI-1 (SITE AA) organism=? DNA sequence DT(H19):DA(F14) DT(H20):DA(F13) DA(H21):DT(F12) DT(H22):DA(F11) DG(H23):DC(F10) DC(H24):DG(F9) DC(H25):DG(F8) DT(H26):DA(F7) DG(H27):DC(F6) DA(H28):DT(F5) DT(H29):DA(F4) DT(H30):DA(F3) DC(H31):DG(F2) chainC ( 25) ARG32 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 77) ALA84 0 1 0 0 0 0 0 0 0 0 0 0 0 (166) ILE174 0 0 0 9 12 0 0 0 0 0 0 0 0 chainD ( 45) LYS449 2 4 1 0 0 0 0 0 0 0 0 0 0 prot.sequence itpvnieeelkssyldyamsvivgRalpdvrdglkpvhrrvlyamnvlgndwnkaykksarvvgdvigkyhphgdsAvydtivrmaqpfslrymlvdgqgnfgsidgdsaaamrteirlakiahelmadleketvdfvdnydgtekipdvmptkipnllvngssgIavgmatnipphnltevingclayiddedisieglmehipgpdfptaaiingrrgieeayrtgrgkvyiraraevevdaktgretiivheipyqvnkarliekiaelvkekrvegisalrdesdkdgmrivievkrdavgevvlnnlysqtqlqvsfginmvalhhgqpkimnlkdiiaafvrhrrevvtrrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykelldqiaellrilgsadrlmevireelelvreqfgdkrrteitan/gkladcqerdpalselylvegdsaggsakqgrnrknqailplkgKilnvekarfdkmlssqevatlitalgcgigrdeynpdklryhsiiimtdadvdgshirtllltffyrqmpeiverghvyiaqpplykvkkgkqeqyikddeamdqyqisialdgatlhtnasapalagealeklvseynatqkminrmerrypkamlkeliyqptlteadlsdeqtvtrwvnalvselndkeqhgsqwkfdvhtnaeqnlfepivrvrthgvdtdypldhefitggeyrrictlgeklrglleedafiergerrqpvasfeqaldwlvkesrrglsiqrykglgemnpeqlwettmdpesrrmlrvtvkdaiaadqlfttlmgdaveprrafieenalkaanidien >7zb5_DE:TATA-box_binding_protein-like;ARM_repeat;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MOT1(1-1836):TBP:DNA - POST-HYDROLYSIS COMPLEX DIMER organism=? DNA sequence DG(B1):DC(A36) DC(B2):DG(A35) DC(B3):DG(A34) DC(B4):DG(A33) DT(B5):DA(A32) DT(B6):DA(A31) DT(B7):DA(A30) DT(B8):DA(A29) DA(B9):DT(A28) DT(B10):DA(A27) DA(B11):DT(A26) DG(B12):DC(A25) DG(B13):DC(A24) DC(B14):DG(A23) DC(B15):DG(A22) DG(B16):DC(A21) DC(B17):DG(A20) DC(B18):DG(A19) DA(B19):DT(A18) DT(B20):DA(A17) DG(B21):DC(A16) DC(B22):DG(A15) DC(B23):DG(A14) DG(B24):DC(A13) DG(B25):DC(A12) DG(B26):DC(A11) DC(B27):DG(A10) DG(B28):DC(A9) DC(B29):DG(A8) DC(B30):DG(A7) DC(B31):DG(A6) DG(B32):DC(A5) DG(B33):DC(A4) DC(B34):DG(A3) DC(B35):DG(A2) DG(B36):DC(A1) chainD ( 9) ASN84 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL86 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE114 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU129 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE131 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL137 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR139 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN174 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL176 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE205 0 0 0 0 0 0 0 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO206 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU220 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE222 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL228 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR230 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (1273) ILE1587 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1274) PHE1588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1278) GLN1592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgitptlqNiVatvnldcrldlktialharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqklgfnakftdfkiqNiVgscdikfpirleglaskhhnfssyepelFPgliyrmikpkivlLiFvsgkiVlTgakvreeiyqafemiypvlqdfr/atrldrlvtiletgstrlirdtavnqladwqkqhpeelfnllsrvvpylrhkdwetrttaakaigkiienaplydpnagrpllrewpferlceflkvdlfdpqwetrhgaamglrevirvhgagagrrrgktrkenndlnrqwlddlayrllcvlmldkftdyssdtsvapiretvgqtlgavlrhisvesvhaiyrllycmvgmvglryvvavrkdlllqdgdmidgvvrcvmqglgdidddvrsvsaatlipmakefvmmrrsaldslinivweslsnlgddlsastgkimdllatlcsfpevleamkvsasqdeersftllvprlypflrhtitsvrlavlkalmtfanlggetsqgwlngrilrlifqniiverdqdtlnmslelwttlvrrlaardpailadefeahaepmmqlalhpigvprhpipmnpalfqkpsggtyvdghmiqgevdlvgvdvlirsrisaakamglimsfiptprlasydtavlqalsspyastqlaaamvideyakncstpevasrfieplqkiidlerpshyrdlvtyvqrvrsasqqlinlfrdhgkvsqgklptlavvvqgepeagpgafsianaekvvnedferlkrlmapgqrlialpqlneareqtvevieeakaakeardarikaaaacalvamkvlpkkpsplikaimdsikteenqelqsrsaatiarlvqlftesgrrgpaekvvanlvkfscvevaetpefpihahktnvilsmqyareakaaritrrgakealeilsknfgaellervptlrtfmeeplvrafsgdlppeardpenafgqeivdamsvirtmtptlhpalhpfvmqqvplvikalrsdlsvfrymaakcmaticsvitvdgmtalvekvlpsinnpldlsfrqgaieviyhliavmgdailpyviflivpvlgrmsdsdnqirliattsfatlvklvpleagipdppglseellkgrdrertfiaqlldpkkiepfkipvaikaelrsyqqegvnwlaflnkyhlhgilcddmglgktlqticivasdhhqraeefartgapevrklpsliicpptlsghwqqeiktyapfltvtayvgspaerramkdsldktdivitsydvcrndidviekynwnycvldeghliknpkakitlavkrltsnhrliltgtpiqnnvlelwslfdflmpgflgaekvfldrfakpiansryskasskeqeagalaiealhkqvlpfllrrlkeevlndlppkilqnyycdlsdlqrklfedftkrqhIFqalQymrklcnklgalrdllvdcgigphralifcqmkemldmvqntsvsylrldgsveankrqdivnkfnsdpsydvlllttsvgglglnltgadtvifvehdwnpqkdlqamdrahrigqkkvvnvyriitrgtleekilslqrfkidvastvvnqqnaglatmdtdqildl >7zb5_E:ARM_repeat;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MOT1(1-1836):TBP:DNA - POST-HYDROLYSIS COMPLEX DIMER organism=? DNA sequence DG(B1):DC(A36) DC(B2):DG(A35) DC(B3):DG(A34) DC(B4):DG(A33) DT(B5):DA(A32) DT(B6):DA(A31) DT(B7):DA(A30) DT(B8):DA(A29) DA(B9):DT(A28) DT(B10):DA(A27) DA(B11):DT(A26) DG(B12):DC(A25) DG(B13):DC(A24) DC(B14):DG(A23) DC(B15):DG(A22) DG(B16):DC(A21) DC(B17):DG(A20) DC(B18):DG(A19) DA(B19):DT(A18) DT(B20):DA(A17) DG(B21):DC(A16) DC(B22):DG(A15) DC(B23):DG(A14) DG(B24):DC(A13) DG(B25):DC(A12) DG(B26):DC(A11) DC(B27):DG(A10) DG(B28):DC(A9) DC(B29):DG(A8) DC(B30):DG(A7) DC(B31):DG(A6) DG(B32):DC(A5) DG(B33):DC(A4) DC(B34):DG(A3) DC(B35):DG(A2) DG(B36):DC(A1) chainE (1273) ILE1587 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1274) PHE1588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1278) GLN1592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence atrldrlvtiletgstrlirdtavnqladwqkqhpeelfnllsrvvpylrhkdwetrttaakaigkiienaplydpnagrpllrewpferlceflkvdlfdpqwetrhgaamglrevirvhgagagrrrgktrkenndlnrqwlddlayrllcvlmldkftdyssdtsvapiretvgqtlgavlrhisvesvhaiyrllycmvgmvglryvvavrkdlllqdgdmidgvvrcvmqglgdidddvrsvsaatlipmakefvmmrrsaldslinivweslsnlgddlsastgkimdllatlcsfpevleamkvsasqdeersftllvprlypflrhtitsvrlavlkalmtfanlggetsqgwlngrilrlifqniiverdqdtlnmslelwttlvrrlaardpailadefeahaepmmqlalhpigvprhpipmnpalfqkpsggtyvdghmiqgevdlvgvdvlirsrisaakamglimsfiptprlasydtavlqalsspyastqlaaamvideyakncstpevasrfieplqkiidlerpshyrdlvtyvqrvrsasqqlinlfrdhgkvsqgklptlavvvqgepeagpgafsianaekvvnedferlkrlmapgqrlialpqlneareqtvevieeakaakeardarikaaaacalvamkvlpkkpsplikaimdsikteenqelqsrsaatiarlvqlftesgrrgpaekvvanlvkfscvevaetpefpihahktnvilsmqyareakaaritrrgakealeilsknfgaellervptlrtfmeeplvrafsgdlppeardpenafgqeivdamsvirtmtptlhpalhpfvmqqvplvikalrsdlsvfrymaakcmaticsvitvdgmtalvekvlpsinnpldlsfrqgaieviyhliavmgdailpyviflivpvlgrmsdsdnqirliattsfatlvklvpleagipdppglseellkgrdrertfiaqlldpkkiepfkipvaikaelrsyqqegvnwlaflnkyhlhgilcddmglgktlqticivasdhhqraeefartgapevrklpsliicpptlsghwqqeiktyapfltvtayvgspaerramkdsldktdivitsydvcrndidviekynwnycvldeghliknpkakitlavkrltsnhrliltgtpiqnnvlelwslfdflmpgflgaekvfldrfakpiansryskasskeqeagalaiealhkqvlpfllrrlkeevlndlppkilqnyycdlsdlqrklfedftkrqhIFqalQymrklcnklgalrdllvdcgigphralifcqmkemldmvqntsvsylrldgsveankrqdivnkfnsdpsydvlllttsvgglglnltgadtvifvehdwnpqkdlqamdrahrigqkkvvnvyriitrgtleekilslqrfkidvastvvnqqnaglatmdtdqildl >7zes_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN SLFN11 DIMER BOUND TO SSDNA organism=? DNA sequence DC(D3) DG(D4) DC(D5) DG(D6) DT(D7) chainA (560) GLU632 0 1 0 0 0 (579) ARG651 0 1 0 0 0 (580) LYS652 0 0 1 7 0 (602) ARG674 7 23 0 0 0 (604) GLU676 1 9 0 0 0 (639) ASP711 7 0 0 0 0 prot.sequence plvvepsypdlvinvgevtlgeenrkklqkiqrdqekervmraacallnsgggvirmakkvehpvemgldleqslreliqssdlqaffetkqqgrcfyifvkswssgpfpedrsvkprlcslssslyrrsetsvrsmdsreafcflktkrkpdpadlifqkdyleygeilpfpesqlvefkqfstkhfqeyvkrtipeyvpafantgggylfigvddksrevlgcakenvdpdslrrkieqaiyklpcvhfcqpqrpitftlkivnvlkrgelygyacmirvnpfccavfseapnswivedkyvcslttekwvgmmtdvyskkglehkkelqqllfsvppgylrytpeslwrdlisehrgleelinkqmqpffrgilifsrswavdlnlqekpgvicdalliaqnstpilytilreqdaegqdyctrtaftlkqklvnmggytgkvcvrakvlclspvspmdypasyslagtqhmeallqslvivllgfrsllsdqlgcevlnlltaqqyeifsrslrknrelfvhglpgsgktimamkimekirnvfhceahrilyvcEnqplrnfisdrnicraetRKtflrenfehiqhivideaqnfRtEdgdwygkaksitrrakggpgilwifldyfqtshlDcsglpplsdqypreeltrivrnadpiakylqkemqvirsnpsfniptgclevfpeaewsqgvqgtlrikkyltveqimtcvadtcrrffdrgyspkdvavlvstakevehykyellkamrkkrvvqlsdacdmlgdhivldsvrrfsglersivfgihprtadpailpnvliclasrakqhlyifpwg >7zg5_C:Ribbon-helix-helix; title=THE CRYSTAL STRUCTURE OF SALMONELLA TACAT3-DNA COMPLEX organism=? DNA sequence DA(F15):DT(E11) DG(F16):DC(E10) DG(F17):DC(E9) DC(F18):DG(E8) DG(F19):DC(E7) DT(F20):DA(E6) DA(F21):DT(E5) DC(F22):DG(E4) DA(F23):DT(E3) DT(F24):DA(E2) DA(F25):DT(E1) chainC ( 6) SER13 0 0 0 0 0 0 4 0 0 0 0 prot.sequence snerlSlrvstdakklivraaaiqqtnltdfvvsnilpvaqkivdaaervylterdtkmimeildnppapnekllaaafalpdm >7zi4_Q: title=CRYO-EM STRUCTURE OF THE HUMAN INO80 COMPLEX BOUND TO A WT NUCLEOSOME organism=? DNA sequence DA(Y-72):DT(X72) DT(Y-71):DA(X71) DC(Y-70):DG(X70) DA(Y-69):DT(X69) DA(Y-68):DT(X68) DT(Y-67):DA(X67) DA(Y-66):DT(X66) DT(Y-65):DA(X65) DC(Y-64):DG(X64) DC(Y-63):DG(X63) DC(Y-62):DG(X62) DG(Y-61):DC(X61) DA(Y-60):DT(X60) DG(Y-59):DC(X59) DT(Y-58):DA(X58) DA(Y-57):DT(X57) DC(Y-56):DG(X56) DA(Y-55):DT(X55) DT(Y-54):DA(X54) DG(Y-53):DC(X53) DC(Y-52):DG(X52) DA(Y-51):DT(X51) DC(Y-50):DG(X50) DA(Y-49):DT(X49) DG(Y-48):DC(X48) DG(Y-47):DC(X47) DA(Y-46):DT(X46) DT(Y-45):DA(X45) DG(Y-44):DC(X44) DT(Y-43):DA(X43) DA(Y-42):DT(X42) DT(Y-41):DA(X41) DA(Y-40):DT(X40) DT(Y-39):DA(X39) DA(Y-38):DT(X38) DT(Y-37):DA(X37) DC(Y-36):DG(X36) DT(Y-35):DA(X35) DG(Y-34):DC(X34) DA(Y-33):DT(X33) DC(Y-32):DG(X32) DA(Y-31):DT(X31) DC(Y-30):DG(X30) DG(Y-29):DC(X29) DT(Y-28):DA(X28) DG(Y-27):DC(X27) DC(Y-26):DG(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DG(Y-23):DC(X23) DG(Y-22):DC(X22) DA(Y-21):DT(X21) DG(Y-20):DC(X20) DA(Y-19):DT(X19) DC(Y-18):DG(X18) DT(Y-17):DA(X17) DA(Y-16):DT(X16) DG(Y-15):DC(X15) DG(Y-14):DC(X14) DG(Y-13):DC(X13) DA(Y-12):DT(X12) DG(Y-11):DC(X11) DT(Y-10):DA(X10) DA(Y-9):DT(X9) DA(Y-8):DT(X8) DT(Y-7):DA(X7) DC(Y-6):DG(X6) DC(Y-5):DG(X5) DC(Y-4):DG(X4) DC(Y-3):DG(X3) DT(Y-2):DA(X2) DT(Y-1):DA(X1) DG(Y0):DC(X0) DG(Y1):DC(X-1) DC(Y2):DG(X-2) DG(Y3):DC(X-3) DG(Y4):DC(X-4) DT(Y5):DA(X-5) DT(Y6):DA(X-6) DA(Y7):DT(X-7) DA(Y8):DT(X-8) DA(Y9):DT(X-9) DA(Y10):DT(X-10) DC(Y11):DG(X-11) DG(Y12):DC(X-12) DC(Y13):DG(X-13) DG(Y14):DC(X-14) DG(Y15):DC(X-15) DG(Y16):DC(X-16) DG(Y17):DC(X-17) DG(Y18):DC(X-18) DA(Y19):DT(X-19) DC(Y20):DG(X-20) DA(Y21):DT(X-21) DG(Y22):DC(X-22) DC(Y23):DG(X-23) DG(Y24):DC(X-24) DC(Y25):DG(X-25) DG(Y26):DC(X-26) DT(Y27):DA(X-27) DA(Y28):DT(X-28) DC(Y29):DG(X-29) DG(Y30):DC(X-30) DT(Y31):DA(X-31) DG(Y32):DC(X-32) DC(Y33):DG(X-33) DG(Y34):DC(X-34) DT(Y35):DA(X-35) DT(Y36):DA(X-36) DT(Y37):DA(X-37) DA(Y38):DT(X-38) DA(Y39):DT(X-39) DG(Y40):DC(X-40) DC(Y41):DG(X-41) DG(Y42):DC(X-42) DG(Y43):DC(X-43) DT(Y44):DA(X-44) DG(Y45):DC(X-45) DC(Y46):DG(X-46) DT(Y47):DA(X-47) DG(Y49):DC(X-49) DA(Y50):DT(X-50) DG(Y51):DC(X-51) DT(Y53):DA(X-53) DG(Y54):DC(X-54) DT(Y55):DA(X-55) DC(Y56):DG(X-56) DT(Y57):DA(X-57) DA(Y58):DT(X-58) DC(Y59):DG(X-59) DG(Y60):DC(X-60) DA(Y61):DT(X-61) DC(Y62):DG(X-62) DC(Y63):DG(X-63) DA(Y64):DT(X-64) DA(Y65):DT(X-65) DT(Y66):DA(X-66) DT(Y67):DA(X-67) DG(Y68):DC(X-68) DA(Y69):DT(X-69) DG(Y70):DC(X-70) DC(Y71):DG(X-71) DG(Y72):DC(X-72) DG(Y73):DC(X-73) DC(Y74):DG(X-74) DC(Y75):DG(X-75) DT(Y76):DA(X-76) DC(Y77):DG(X-77) DG(Y78):DC(X-78) DG(Y79):DC(X-79) DC(Y80):DG(X-80) DA(Y81):DT(X-81) DC(Y82):DG(X-82) DC(Y83):DG(X-83) DG(Y84):DC(X-84) DG(Y85):DC(X-85) chainQ ( 17) LYS136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kdpnfvhsghggavagKknrtwknlkqilaseralpwqlndpnyfsidappsfkpakkysdvsgllanytdpqsklrfstieefsyirrlpsdvvtgylalrkatsi >7zie_A:HMG-box; title=GCF1P, MULTIMERIZES AND BRIDGES THE MITOCHONDRIAL DNA FROM CANDIDA ALBICANS BY A SPECIFIC MECHANISM. organism=? DNA sequence DA(Z1):DT(Y20) DT(Z2):DA(Y19) DA(Z3):DT(Y18) DA(Z4):DT(Y17) DT(Z5):DA(Y16) DA(Z6):DT(Y15) DA(Z7):DT(Y14) DA(Z8):DT(Y13) DT(Z9):DA(Y12) DT(Z10):DA(Y11) DA(Z11):DT(Y10) DT(Z12):DA(Y9) DA(Z13):DT(Y8) DT(Z14):DA(Y7) DA(Z15):DT(Y6) DA(Z16):DT(Y5) DT(Z17):DA(Y4) DA(Z18):DT(Y3) DA(Z20):DT(Y1) chainA (109) PHE168 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ALA169 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) VAL172 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) LEU182 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) THR183 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) MET186 0 16 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tkairlqkkinearsakknlqqqikdistqhktlskqrkfeekarskihklapgnfysmfqkkragdsvaefyqfpeeekakwiaardaywekaksyftpkpklgangFAkyVqenyirgdsLTetMkkladewnalsetekqqyqiskedkekykkalekwkelrlkeysdylkfkenykve >7zkl_H:Trypsin-like_serine_proteases; title=X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA THROMBIN AND A PSEUDO-CYCLIC THROMBIN BINDING APTAMER (TBA-NNP/DDP) - CRYSTAL FORM ALPHA organism=? DNA sequence DG(A14) DT(A13) DT(A12) DG(A11) DG(A10) DT(A9) DG(A8) DT(A7) DG(A6) DG(A1):DG(A6) DG(A2):DG(A5) DT(A4) DT(A3) chainH ( 9) ILE24 0 0 9 0 0 0 0 0 0 0 0 0 0 ( 66) HIS71 0 0 7 0 0 0 0 0 0 0 0 0 0 ( 67) SER72 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 70) ARG75 0 8 3 8 0 0 0 0 0 0 19 6 0 ( 71) TYR76 0 0 0 0 0 0 0 0 0 0 0 10 31 ( 72) GLU77 0 0 14 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77A 25 9 0 0 0 0 0 0 0 0 4 5 0 ( 75) ILE79 0 4 7 0 0 0 0 0 0 0 0 0 0 ( 78) ILE82 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence ivegsdaeIgmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkHSrtRYeRnIekIsmlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketwtqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqf >7zkl_HL:Trypsin-like_serine_proteases; title=X-RAY STRUCTURE OF THE COMPLEX BETWEEN HUMAN ALPHA THROMBIN AND A PSEUDO-CYCLIC THROMBIN BINDING APTAMER (TBA-NNP/DDP) - CRYSTAL FORM ALPHA organism=? DNA sequence DG(A14) DT(A13) DT(A12) DG(A11) DG(A10) DT(A9) DG(A8) DT(A7) DG(A6) DG(A1):DG(A6) DG(A2):DG(A5) DT(A4) DT(A3) chainL chainH ( 9) ILE24 0 0 9 0 0 0 0 0 0 0 0 0 0 ( 66) HIS71 0 0 7 0 0 0 0 0 0 0 0 0 0 ( 67) SER72 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 70) ARG75 0 8 3 8 0 0 0 0 0 0 19 6 0 ( 71) TYR76 0 0 0 0 0 0 0 0 0 0 0 10 31 ( 72) GLU77 0 0 14 0 0 0 0 0 0 0 0 0 0 ( 73) ARG77A 25 9 0 0 0 0 0 0 0 0 4 5 0 ( 75) ILE79 0 4 7 0 0 0 0 0 0 0 0 0 0 ( 78) ILE82 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence ivegsdaeIgmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkHSrtRYeRnIekIsmlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketwtqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqf/sgeadcglRplfekksledkterellesyidg >7zla_AB:PLP-dependent_transferases;"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF HOLO-PDXR FROM BACILLUS CLAUSII BOUND TO ITS TARGET DNA IN THE HALF-CLOSED CONFORMATION organism=? DNA sequence DC(D3):DG(C46) DT(D4):DA(C45) DG(D5):DC(C44) DA(D6):DT(C43) DC(D7):DG(C42) DC(D8):DG(C41) DA(D9):DT(C40) DC(D10):DG(C39) DA(D11):DT(C38) DT(D12):DA(C37) DT(D13):DA(C36) DG(D14):DC(C35) DT(D15):DA(C34) DA(D16):DT(C33) DA(D17):DT(C32) DG(D18):DC(C31) DT(D19):DA(C30) DG(D20):DC(C29) DT(D21):DA(C28) DC(D22):DG(C27) DA(D23):DT(C26) DG(D24):DC(C25) DT(D25):DA(C24) DT(D26):DA(C23) DT(D27):DA(C22) DT(D28):DA(C21) DT(D29):DA(C20) DA(D30):DT(C19) DA(D31):DT(C18) DG(D32):DC(C17) DA(D33):DT(C16) DA(D34):DT(C15) DA(D35):DT(C14) DA(D36):DT(C13) DT(D37):DA(C12) DG(D38):DC(C11) DA(D39):DT(C10) DT(D40):DA(C9) DG(D41):DC(C8) DA(D42):DT(C7) DG(D43):DC(C6) DG(D44):DC(C5) DT(D45):DA(C4) DC(D46):DG(C3) DA(D47):DT(C2) DG(D48):DC(C1) chainA chainB ( 11) TYR17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 36) LYS42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 ( 37) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 ( 46) SER52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 ( 47) GLN53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 22 0 0 0 0 0 ( 48) ASN54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 1 1 0 0 0 0 0 ( 49) THR55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 51) GLU57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 ( 68) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 1 0 prot.sequence kqdtirynfhpthidttsfpfeqwrkyfkqtmckenhrlllngdhqgeasfrreiayylhhsrgvnctpeqvvvgagvetllqqlflllgeskvygiedpgyqlmrkllshypndyvpfqvdeegidvdsivrtavdvvyttpsrhfpygsvlsinrrkqllhwaeahenryiieddydsefrytgktipslqsmdvhnkviylgafsslipsvrisymvlpaplahlyknkfsyyhstvsridqqvltafmkqgdfekhlnrmrkiyrrklekvlsllkryedklliigersglhivlvvkngmdeqtlvekalaakakvyplsaysleraihppqivlgfgsipedeleeaiatvlnawgf/elnrdlptplYeqlyahikteitegrigygtklpsKRkladslklSQNTvEaayeqlvaegyvevipRkgfyvqayedleyirapqapgdalatkqdtirynfhpthidttsfpfeqwrkyfkqtmckenhrlllngdhqgeasfrreiayylhhsrgvnctpeqvvvgagvetllqqlflllgeskvygiedpgyqlmrkllshypndyvpfqvdeegidvdsivrtavdvvyttpsrhfpygsvlsinrrkqllhwaeahenryiieddydsefrytgktipslqsmdvhnkviylgafsslipsvrisymvlpaplahlyknkfsyyhstvsridqqvltafmkqgdfekhlnrmrkiyrrklekvlsllkryedklliigersglhivlvvkngmdeqtlvekalaakakvyplsaysleraihppqivlgfgsipedeleeaiatvlnawgf >7zla_B:PLP-dependent_transferases;"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF HOLO-PDXR FROM BACILLUS CLAUSII BOUND TO ITS TARGET DNA IN THE HALF-CLOSED CONFORMATION organism=? DNA sequence DC(C1):DG(D48) DT(C2):DA(D47) DG(C3):DC(D46) DA(C4):DT(D45) DC(C5):DG(D44) DC(C6):DG(D43) DT(C7):DA(D42) DC(C8):DG(D41) DA(C9):DT(D40) DT(C10):DA(D39) DC(C11):DG(D38) DA(C12):DT(D37) DT(C13):DA(D36) DT(C14):DA(D35) DT(C15):DA(D34) DT(C16):DA(D33) DC(C17):DG(D32) DT(C18):DA(D31) DT(C19):DA(D30) DA(C20):DT(D29) DA(C21):DT(D28) DA(C22):DT(D27) DA(C23):DT(D26) DA(C24):DT(D25) DC(C25):DG(D24) DT(C26):DA(D23) DG(C27):DC(D22) DA(C28):DT(D21) DC(C29):DG(D20) DA(C30):DT(D19) DC(C31):DG(D18) DT(C32):DA(D17) DT(C33):DA(D16) DA(C34):DT(D15) DC(C35):DG(D14) DA(C36):DT(D13) DA(C37):DT(D12) DT(C38):DA(D11) DG(C39):DC(D10) DT(C40):DA(D9) DG(C41):DC(D8) DG(C42):DC(D7) DT(C43):DA(D6) DC(C44):DG(D5) DA(C45):DT(D4) DG(C46):DC(D3) chainB ( 11) TYR17 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) LYS42 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG43 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) SER52 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) GLN53 0 0 0 0 0 22 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ASN54 0 0 0 0 0 1 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) THR55 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) GLU57 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ARG74 0 1 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence elnrdlptplYeqlyahikteitegrigygtklpsKRkladslklSQNTvEaayeqlvaegyvevipRkgfyvqayedleyirapqapgdalatkqdtirynfhpthidttsfpfeqwrkyfkqtmckenhrlllngdhqgeasfrreiayylhhsrgvnctpeqvvvgagvetllqqlflllgeskvygiedpgyqlmrkllshypndyvpfqvdeegidvdsivrtavdvvyttpsrhfpygsvlsinrrkqllhwaeahenryiieddydsefrytgktipslqsmdvhnkviylgafsslipsvrisymvlpaplahlyknkfsyyhstvsridqqvltafmkqgdfekhlnrmrkiyrrklekvlsllkryedklliigersglhivlvvkngmdeqtlvekalaakakvyplsaysleraihppqivlgfgsipedeleeaiatvlnawgf >7zn5_AB:PLP-dependent_transferases;"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF HOLO-PDXR FROM BACILLUS CLAUSII BOUND TO ITS TARGET DNA IN THE CLOSED CONFORMATION, C2 SYMMETRY. organism=? DNA sequence DA(D2):DT(C47) DC(D3):DG(C46) DT(D4):DA(C45) DG(D5):DC(C44) DA(D6):DT(C43) DC(D7):DG(C42) DC(D8):DG(C41) DA(D9):DT(C40) DC(D10):DG(C39) DA(D11):DT(C38) DT(D12):DA(C37) DT(D13):DA(C36) DG(D14):DC(C35) DT(D15):DA(C34) DA(D16):DT(C33) DA(D17):DT(C32) DG(D18):DC(C31) DT(D19):DA(C30) DG(D20):DC(C29) DT(D21):DA(C28) DC(D22):DG(C27) DA(D23):DT(C26) DG(D24):DC(C25) DT(D25):DA(C24) DT(D26):DA(C23) DT(D27):DA(C22) DT(D28):DA(C21) DT(D29):DA(C20) DA(D30):DT(C19) DA(D31):DT(C18) DG(D32):DC(C17) DA(D33):DT(C16) DA(D34):DT(C15) DA(D35):DT(C14) DA(D36):DT(C13) DT(D37):DA(C12) DG(D38):DC(C11) DA(D39):DT(C10) DT(D40):DA(C9) DG(D41):DC(C8) DA(D42):DT(C7) DG(D43):DC(C6) DG(D44):DC(C5) DT(D45):DA(C4) DC(D46):DG(C3) DA(D47):DT(C2) DG(D48):DC(C1) chainA ( 29) ARG43 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER52 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN53 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ASN54 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLU57 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG74 5 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 33) LYS42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 34) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 ( 43) SER52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 44) GLN53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 ( 45) ASN54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 ( 48) GLU57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 ( 65) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 prot.sequence plyeqlyahikteitegrigygtklpskRkladslklSQNtvEaayeqlvaegyvevipRkgfyvqayetirynfhpthidttsfpfeqwrkyfkqtmckenhrlllngdhqgeasfrreiayylhhsrgvnctpeqvvvgagvetllqqlflllgeskvygiedpgyqlmrkllshypndyvpfqvdeegidvdsivrtavdvvyttpsrhfpygsvlsinrrkqllhwaeahenryiieddydsefrytgktipslqsmdvhnkviylgafsslipsvrisymvlpaplahlyknkfsyyhstvsridqqvltafmkqgdfekhlnrmrkiyrrklekvlsllkryedklliigersglhivlvvkngmdeqtlvekalaakakvyplsaysleraihppqivlgfgsipedeleeaiatvlnawgf/rdlptplyeqlyahikteitegrigygtklpsKRkladslklSQNtvEaayeqlvaegyvevipRkgfyvqayetirynfhpthidttsfpfeqwrkyfkqtmckenhrlllngdhqgeasfrreiayylhhsrgvnctpeqvvvgagvetllqqlflllgeskvygiedpgyqlmrkllshypndyvpfqvdeegidvdsivrtavdvvyttpsrhfpygsvlsinrrkqllhwaeahenryiieddydsefrytgktipslqsmdvhnkviylgafsslipsvrisymvlpaplahlyknkfsyyhstvsridqqvltafmkqgdfekhlnrmrkiyrrklekvlsllkryedklliigersglhivlvvkngmdeqtlvekalaakakvyplsaysleraihppqivlgfgsipedeleeaiatvlnawgf >7zn5_B:PLP-dependent_transferases;"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF HOLO-PDXR FROM BACILLUS CLAUSII BOUND TO ITS TARGET DNA IN THE CLOSED CONFORMATION, C2 SYMMETRY. organism=? DNA sequence DA(D2):DT(C47) DC(D3):DG(C46) DT(D4):DA(C45) DG(D5):DC(C44) DA(D6):DT(C43) DC(D7):DG(C42) DC(D8):DG(C41) DA(D9):DT(C40) DC(D10):DG(C39) DA(D11):DT(C38) DT(D12):DA(C37) DT(D13):DA(C36) DG(D14):DC(C35) DT(D15):DA(C34) DA(D16):DT(C33) DA(D17):DT(C32) DG(D18):DC(C31) DT(D19):DA(C30) DG(D20):DC(C29) DT(D21):DA(C28) DC(D22):DG(C27) DA(D23):DT(C26) DG(D24):DC(C25) DT(D25):DA(C24) DT(D26):DA(C23) DT(D27):DA(C22) DT(D28):DA(C21) DT(D29):DA(C20) DA(D30):DT(C19) DA(D31):DT(C18) DG(D32):DC(C17) DA(D33):DT(C16) DA(D34):DT(C15) DA(D35):DT(C14) DA(D36):DT(C13) DT(D37):DA(C12) DG(D38):DC(C11) DA(D39):DT(C10) DT(D40):DA(C9) DG(D41):DC(C8) DA(D42):DT(C7) DG(D43):DC(C6) DG(D44):DC(C5) DT(D45):DA(C4) DC(D46):DG(C3) DA(D47):DT(C2) DG(D48):DC(C1) chainB ( 33) LYS42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 34) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 ( 43) SER52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 44) GLN53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 ( 45) ASN54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 ( 48) GLU57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 ( 65) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 prot.sequence rdlptplyeqlyahikteitegrigygtklpsKRkladslklSQNtvEaayeqlvaegyvevipRkgfyvqayetirynfhpthidttsfpfeqwrkyfkqtmckenhrlllngdhqgeasfrreiayylhhsrgvnctpeqvvvgagvetllqqlflllgeskvygiedpgyqlmrkllshypndyvpfqvdeegidvdsivrtavdvvyttpsrhfpygsvlsinrrkqllhwaeahenryiieddydsefrytgktipslqsmdvhnkviylgafsslipsvrisymvlpaplahlyknkfsyyhstvsridqqvltafmkqgdfekhlnrmrkiyrrklekvlsllkryedklliigersglhivlvvkngmdeqtlvekalaakakvyplsaysleraihppqivlgfgsipedeleeaiatvlnawgf >7zo1_B: title=SPCAS9 BOUND TO CD34 OFF-TARGET9 DNA SUBSTRATE organism=Streptococcus pyogenes DNA sequence DT(D0):DA(C0) DG(D1):DC(C-1) DG(D2):DC(C-2) DT(D3):DA(C-3) DA(D4):DT(C-4) DT(D5):DA(C-5) DT(D6):DA(C-6) DG(D7):DC(C-7) chainB (914) LYS1107 1 6 1 0 0 0 0 0 (1026) GLU1219 0 1 0 0 0 0 0 0 (1136) ARG1333 15 13 2 0 0 0 0 0 (1138) ARG1335 0 13 12 4 0 0 0 0 prot.sequence kkysiglaigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemaretrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygfysnimnffkteitgeirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyespedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsqlg >7zpa_A:PLP-dependent_transferases;"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF HOLO-PDXR FROM BACILLUS CLAUSII BOUND TO ITS TARGET DNA IN THE CLOSED CONFORMATION, C1 SYMMETRY organism=? DNA sequence DA(D2):DT(C47) DC(D3):DG(C46) DT(D4):DA(C45) DG(D5):DC(C44) DA(D6):DT(C43) DC(D7):DG(C42) DC(D8):DG(C41) DA(D9):DT(C40) DC(D10):DG(C39) DA(D11):DT(C38) DT(D12):DA(C37) DT(D13):DA(C36) DG(D14):DC(C35) DT(D15):DA(C34) DA(D16):DT(C33) DA(D17):DT(C32) DG(D18):DC(C31) DT(D19):DA(C30) DG(D20):DC(C29) DT(D21):DA(C28) DC(D22):DG(C27) DA(D23):DT(C26) DG(D24):DC(C25) DT(D25):DA(C24) DT(D26):DA(C23) DT(D27):DA(C22) DT(D28):DA(C21) DT(D29):DA(C20) DA(D30):DT(C19) DA(D31):DT(C18) DG(D32):DC(C17) DA(D33):DT(C16) DA(D34):DT(C15) DA(D35):DT(C14) DA(D36):DT(C13) DT(D37):DA(C12) DG(D38):DC(C11) DA(D39):DT(C10) DT(D40):DA(C9) DG(D41):DC(C8) DA(D42):DT(C7) DG(D43):DC(C6) DG(D44):DC(C5) DT(D45):DA(C4) DC(D46):DG(C3) DA(D47):DT(C2) DG(D48):DC(C1) chainA ( 29) ARG43 0 0 11 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER52 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN53 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ASN54 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG74 6 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence plyeqlyahikteitegrigygtklpskRkladslklSQNtveaayeqlvaegyvevipRkgfyvqakqdtirynfhpthidttsfpfeqwrkyfkqtmckenhrlllngdhqgeasfrreiayylhhsrgvnctpeqvvvgagvetllqqlflllgeskvygiedpgyqlmrkllshypndyvpfqvdeegidvdsivrtavdvvyttpsrhfpygsvlsinrrkqllhwaeahenryiieddydsefrytgktipslqsmdvhnkviylgafsslipsvrisymvlpaplahlyknkfsyyhstvsridqqvltafmkqgdfekhlnrmrkiyrrklekvlsllkryedklliigersglhivlvvkngmdeqtlvekalaakakvyplsaysleraihppqivlgfgsipedeleeaiatvlnawgf >7zpa_AB:PLP-dependent_transferases;"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF HOLO-PDXR FROM BACILLUS CLAUSII BOUND TO ITS TARGET DNA IN THE CLOSED CONFORMATION, C1 SYMMETRY organism=? DNA sequence DA(D2):DT(C47) DC(D3):DG(C46) DT(D4):DA(C45) DG(D5):DC(C44) DA(D6):DT(C43) DC(D7):DG(C42) DC(D8):DG(C41) DA(D9):DT(C40) DC(D10):DG(C39) DA(D11):DT(C38) DT(D12):DA(C37) DT(D13):DA(C36) DG(D14):DC(C35) DT(D15):DA(C34) DA(D16):DT(C33) DA(D17):DT(C32) DG(D18):DC(C31) DT(D19):DA(C30) DG(D20):DC(C29) DT(D21):DA(C28) DC(D22):DG(C27) DA(D23):DT(C26) DG(D24):DC(C25) DT(D25):DA(C24) DT(D26):DA(C23) DT(D27):DA(C22) DT(D28):DA(C21) DT(D29):DA(C20) DA(D30):DT(C19) DA(D31):DT(C18) DG(D32):DC(C17) DA(D33):DT(C16) DA(D34):DT(C15) DA(D35):DT(C14) DA(D36):DT(C13) DT(D37):DA(C12) DG(D38):DC(C11) DA(D39):DT(C10) DT(D40):DA(C9) DG(D41):DC(C8) DA(D42):DT(C7) DG(D43):DC(C6) DG(D44):DC(C5) DT(D45):DA(C4) DC(D46):DG(C3) DA(D47):DT(C2) DG(D48):DC(C1) chainA ( 29) ARG43 0 0 11 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) SER52 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLN53 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ASN54 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG74 6 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 36) LYS42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 ( 37) ARG43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 ( 46) SER52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 47) GLN53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 1 0 0 0 0 ( 48) ASN54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 ( 51) GLU57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 ( 68) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 prot.sequence plyeqlyahikteitegrigygtklpskRkladslklSQNtveaayeqlvaegyvevipRkgfyvqakqdtirynfhpthidttsfpfeqwrkyfkqtmckenhrlllngdhqgeasfrreiayylhhsrgvnctpeqvvvgagvetllqqlflllgeskvygiedpgyqlmrkllshypndyvpfqvdeegidvdsivrtavdvvyttpsrhfpygsvlsinrrkqllhwaeahenryiieddydsefrytgktipslqsmdvhnkviylgafsslipsvrisymvlpaplahlyknkfsyyhstvsridqqvltafmkqgdfekhlnrmrkiyrrklekvlsllkryedklliigersglhivlvvkngmdeqtlvekalaakakvyplsaysleraihppqivlgfgsipedeleeaiatvlnawgf/elnrdlptplyeqlyahikteitegrigygtklpsKRkladslklSQNtvEaayeqlvaegyvevipRkgfyvqayedleydtirynfhpthidttsfpfeqwrkyfkqtmckenhrlllngdhqgeasfrreiayylhhsrgvnctpeqvvvgagvetllqqlflllgeskvygiedpgyqlmrkllshypndyvpfqvdeegidvdsivrtavdvvyttpsrhfpygsvlsinrrkqllhwaeahenryiieddydsefrytgktipslqsmdvhnkviylgafsslipsvrisymvlpaplahlyknkfsyyhstvsridqqvltafmkqgdfekhlnrmrkiyrrklekvlsllkryedklliigersglhivlvvkngmdeqtlvekalaakakvyplsaysleraihppqivlgfgsipedeleeaiatvlnawgf >7zpp_A:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=CRYO-EM STRUCTURE OF THE MVV CSC INTASOME AT 4.5A RESOLUTION organism=VISNA/MAEDI VIRUS EV1 KV1772 DNA sequence DG(Q4):DC(R18) DC(Q5):DG(R17) DG(Q6):DC(R16) DA(Q7):DT(R15) DG(Q8):DC(R14) DA(Q9):DT(R13) DT(Q10):DA(R12) DC(Q11):DG(R11) DC(Q12):DG(R10) DG(Q13):DC(R9) DC(Q14):DG(R8) DT(Q15):DA(R7) DC(Q16):DG(R6) DC(Q17):DG(R5) DG(Q18):DC(R4) DG(Q19):DC(R3) DT(Q20):DA(R2) DG(Q21):DC(R1) chainA ( 29) ARG30 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 33) GLU34 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 49) SER50 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) ARG231 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 3 0 0 prot.sequence ieniplaeeehnkwhqdavslhlefgipRtaaEdivqqcdvcqenkmpStlrgsnkrgidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkRghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk >7zpp_ADIN:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=CRYO-EM STRUCTURE OF THE MVV CSC INTASOME AT 4.5A RESOLUTION organism=VISNA/MAEDI VIRUS EV1 KV1772 DNA sequence DC(R1):DG(Q21) DA(R2):DT(Q20) DC(R3):DG(Q19) DC(R4):DG(Q18) DG(R5):DC(Q17) DG(R6):DC(Q16) DA(R7):DT(Q15) DG(R8):DC(Q14) DC(R9):DG(Q13) DG(R10):DC(Q12) DG(R11):DC(Q11) DA(R12):DT(Q10) DT(R13):DA(Q9) DC(R14):DG(Q8) DT(R15):DA(Q7) DC(R16):DG(Q6) DG(R17):DC(Q5) DC(R18):DG(Q4) chainA ( 29) ARG30 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 33) GLU34 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 49) SER50 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 (230) ARG231 0 0 3 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainI (147) GLN148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (150) ALA151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (154) ARG155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 7 3 (157) GLN158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 chainN prot.sequence ieniplaeeehnkwhqdavslhlefgipRtaaEdivqqcdvcqenkmpStlrgsnkrgidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkRghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk/idhwqvdythyedkiilvwvetnsgliyAervKgetgqefrvqtmkwyAmfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfippp/ieniplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkmpstlrgsnkrgidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpQsqAlveRthQtlkntleklipmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk/niplaeeehnkwhqdavslhlefgiprtaaedivqqcdvcqenkkrgidhwqvdythyedkiilvwvetnsgliyaervkgetgqefrvqtmkwyamfapkslqsdngpafvaestqllmkylgiehttgipwnpqsqalverthqTlkNtleKliPmfnafesalagtlitlnikrkgglgtspmdififnkeqqriqqqskskqekirfcyyrtrkrghpgewqgptqvlwggdgaivvkdrgtdrylviankdvkfipppk >7zqs_D:Zn-dependent_exopeptidases;PA_domain;Transferrin_receptor-like_dimerisation_domain; title=CRYO-EM STRUCTURE OF HUMAN TRANSFERRIN RECEPTOR 1 BOUND TO DNA APTAMER organism=? DNA sequence DA(C11) DA(C12) DT(C19):DG(C26) DG(C20) DT(C21)xDT(C25) DT(C22):DG(C24) DT(C23) DC(C27):DT(C37) DA(C35) DG(C34) DG(C28):DG(C33) DG(C29):DT(C32) DT(C30):DG(C14) DG(C31) DG(C36):DG(C18) DG(C38):DG(C16) DC(C39):DG(C15) DG(C40):DA(C13) chainD (496) ASN615 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (500) LEU619 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (504) ARG623 0 0 2 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (507) ASN626 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (510) ARG629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 (524) TYR643 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (525) SER644 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (527) ARG646 0 0 0 2 10 0 10 0 0 0 0 0 0 0 0 0 0 0 (531) PHE650 0 0 0 0 0 0 43 0 0 0 0 0 0 0 0 0 0 0 (532) ARG651 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rrlywddlkrklsekldstdftgtikllnensyvpreagsqkdenlalyvenqfrefklskvwrdqhfvkiqvkdsaqnsviivdkngrlvylvenpggyvayskaatvtgklvhanfgtkkdfedlytpvngsivivragkitfaekvanaeslnaigvliymdqtkfpivnaelsffghahlgtgdpytpgfpsfnhtqfppsrssglpnipvqtisraaaeklfgnmegdcpsdwktdstcrmvtsesknvkltvsnvlkeikilnifgvikgfvepdhyvvvgaqrdawgpgaaksgvgtalllklaqmfsdmvlkdgfqpsrsiifaswsagdfgsvgatewlegylsslhlkaftyinldkavlgtsnfkvsaspllytliektmqnvkhpvtgqflyqdsnwaskvekltldnaafpflaysgipavsfcfcedtdypylgttmdtykelieripelnkvaraaaevagqfviklthdvelnldyeryNsqlLsfvRdlNqyRadikemglslqwlYSaRgdfFRatsrlttdfgnaektdrfvmkklndrvmrveyhflspyvspkespfrhvfwgsgshtlpallenlklrkqnngafnetlfrnqlalatwtiqgaanalsgdvwdidn >7zs9_e:Histone-fold; title=YEAST RNA POLYMERASE II TRANSCRIPTION PRE-INITIATION COMPLEX WITH THE +1 NUCLEOSOME (COMPLEX A) organism=? DNA sequence DA(N-73):DT(T73) DG(N-72):DC(T72) DC(N-71):DG(T71) DA(N-70):DT(T70) DC(N-69):DG(T69) DG(N-68):DC(T68) DC(N-67):DG(T67) DT(N-66):DA(T66) DG(N-65):DC(T65) DT(N-64):DA(T64) DG(N-63):DC(T63) DT(N-62):DA(T62) DA(N-61):DT(T61) DT(N-60):DA(T60) DA(N-59):DT(T59) DT(N-58):DA(T58) DA(N-57):DT(T57) DA(N-56):DT(T56) DT(N-55):DA(T55) DA(N-54):DT(T54) DG(N-53):DC(T53) DC(N-52):DG(T52) DT(N-51):DA(T51) DA(N-50):DT(T50) DT(N-49):DA(T49) DG(N-48):DC(T48) DG(N-47):DC(T47) DA(N-46):DT(T46) DA(N-45):DT(T45) DC(N-44):DG(T44) DG(N-43):DC(T43) DT(N-42):DA(T42) DT(N-41):DA(T41) DC(N-40):DG(T40) DG(N-39):DC(T39) DA(N-38):DT(T38) DT(N-37):DA(T37) DT(N-36):DA(T36) DC(N-35):DG(T35) DA(N-34):DT(T34) DC(N-33):DG(T33) DC(N-32):DG(T32) DT(N-31):DA(T31) DC(N-30):DG(T30) DC(N-29):DG(T29) DG(N-28):DC(T28) DA(N-27):DT(T27) DT(N-26):DA(T26) DG(N-25):DC(T25) DT(N-24):DA(T24) DG(N-23):DC(T23) DT(N-22):DA(T22) DG(N-21):DC(T21) DT(N-20):DA(T20) DT(N-19):DA(T19) DG(N-18):DC(T18) DT(N-17):DA(T17) DA(N-16):DT(T16) DC(N-15):DG(T15) DA(N-14):DT(T14) DT(N-13):DA(T13) DA(N-12):DT(T12) DC(N-11):DG(T11) DA(N-10):DT(T10) DT(N-9):DA(T9) DA(N-8):DT(T8) DA(N-7):DT(T7) DA(N-6):DT(T6) DA(N-5):DT(T5) DA(N-4):DT(T4) DT(N-3):DA(T3) DA(N-2):DT(T2) DT(N-1):DA(T1) DC(N0):DG(T0) DA(N1):DT(T-1) DT(N2):DA(T-2) DA(N3):DT(T-3) DG(N4):DC(T-4) DC(N5):DG(T-5) DT(N6):DA(T-6) DC(N7):DG(T-7) DT(N8):DA(T-8) DT(N9):DA(T-9) DC(N10):DG(T-10) DT(N11):DA(T-11) DG(N12):DC(T-12) DC(N13):DG(T-13) DG(N14):DC(T-14) DC(N15):DG(T-15) DT(N16):DA(T-16) DG(N17):DC(T-17) DT(N18):DA(T-18) DG(N19):DC(T-19) DT(N20):DA(T-20) DT(N21):DA(T-21) DG(N22):DC(T-22) DG(N23):DC(T-23) DT(N24):DA(T-24) DC(N25):DG(T-25) DG(N26):DC(T-26) DT(N27):DA(T-27) DA(N28):DT(T-28) DG(N29):DC(T-29) DA(N30):DT(T-30) DC(N31):DG(T-31) DA(N32):DT(T-32) DG(N33):DC(T-33) DC(N34):DG(T-34) DT(N35):DA(T-35) DC(N36):DG(T-36) DT(N37):DA(T-37) DA(N38):DT(T-38) DG(N39):DC(T-39) DC(N40):DG(T-40) DA(N41):DT(T-41) DC(N42):DG(T-42) DC(N43):DG(T-43) DG(N44):DC(T-44) DC(N45):DG(T-45) DT(N46):DA(T-46) DT(N47):DA(T-47) DA(N48):DT(T-48) DA(N49):DT(T-49) DA(N50):DT(T-50) DC(N51):DG(T-51) DG(N52):DC(T-52) DC(N53):DG(T-53) DA(N54):DT(T-54) DC(N55):DG(T-55) DG(N56):DC(T-56) DT(N57):DA(T-57) DA(N58):DT(T-58) DC(N59):DG(T-59) DG(N60):DC(T-60) DC(N61):DG(T-61) DG(N62):DC(T-62) DC(N63):DG(T-63) DT(N64):DA(T-64) DG(N65):DC(T-65) DT(N66):DA(T-66) DC(N67):DG(T-67) DC(N68):DG(T-68) DC(N69):DG(T-69) DC(N70):DG(T-70) DC(N71):DG(T-71) DG(N72):DC(T-72) DC(N73):DG(T-73) DG(N74):DC(T-74) DT(N75):DA(T-75) DT(N76):DA(T-76) DT(N77):DA(T-77) DT(N78):DA(T-78) DA(N79):DT(T-79) DA(N80):DT(T-80) DC(N81):DG(T-81) DC(N82):DG(T-82) DG(N83):DC(T-83) DC(N84):DG(T-84) DC(N85):DG(T-85) DA(N86):DT(T-86) DA(N87):DT(T-87) DG(N88):DC(T-88) DG(N89):DC(T-89) DG(N90):DC(T-90) DG(N91):DC(T-91) DA(N92):DT(T-92) DT(N93):DA(T-93) DT(N94):DA(T-94) DA(N95):DT(T-95) DC(N96):DG(T-96) DT(N97):DA(T-97) DC(N98):DG(T-98) DC(N99):DG(T-99) DC(N100):DG(T-100) DT(N101):DA(T-101) DA(N102):DT(T-102) DG(N103):DC(T-103) DT(N104):DA(T-104) DC(N105):DG(T-105) DT(N106):DA(T-106) DC(N107):DG(T-107) DC(N108):DG(T-108) DA(N109):DT(T-109) DG(N110):DC(T-110) DG(N111):DC(T-111) DC(N112):DG(T-112) DA(N113):DT(T-113) DC(N114):DG(T-114) DG(N115):DC(T-115) DT(N116):DA(T-116) DG(N117):DC(T-117) DT(N118):DA(T-118) DC(N119):DG(T-119) DA(N120):DT(T-120) DG(N121):DC(T-121) DA(N122):DT(T-122) DT(N123):DA(T-123) DA(N124):DT(T-124) DT(N125):DA(T-125) DA(N126):DT(T-126) DT(N127):DA(T-127) DA(N128):DT(T-128) DC(N129):DG(T-129) DA(N130):DT(T-130) DT(N131):DA(T-131) DC(N132):DG(T-132) DG(N133):DC(T-133) DA(N134):DT(T-134) DT(N135):DA(T-135) chaine ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger >7zvt_AB:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=CRYOEM STRUCTURE OF KU HETERODIMER BOUND TO DNA organism=? DNA sequence DT(C2):DA(D33) DC(C3):DG(D32) DC(C4):DG(D31) DC(C5):DG(D30) DT(C6):DA(D29) DC(C7):DG(D28) DT(C8):DA(D27) DA(C9):DT(D26) DG(C10):DC(D25) DA(C11):DT(D24) DT(C12):DA(D23) chainA chainB (385) ARG400 0 0 0 0 0 0 0 0 0 3 0 prot.sequence grdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisvhfeesskledllrkvraketrkralsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsriilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkk >7zvt_B:SPOC_domain-like;vWA-like; title=CRYOEM STRUCTURE OF KU HETERODIMER BOUND TO DNA organism=? DNA sequence DT(C2):DA(D33) DC(C3):DG(D32) DC(C4):DG(D31) DC(C5):DG(D30) DT(C6):DA(D29) DC(C7):DG(D28) DT(C8):DA(D27) DA(C9):DT(D26) DG(C10):DC(D25) DA(C11):DT(D24) DT(C12):DA(D23) chainB (385) ARG400 0 0 0 0 0 0 0 0 0 3 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkk >7zwa_A:SPOC_domain-like;vWA-like; title=CRYOEM STRUCTURE OF KU HETERODIMER BOUND TO DNA AND PAXX organism=? DNA sequence DG(D1):DC(E15) DA(D2):DT(E14) DT(D3):DA(E13) DC(D4):DG(E12) DC(D5):DG(E11) DC(D6):DG(E10) DT(D7):DA(E9) DC(D8):DG(E8) DT(D9):DA(E7) DA(D10):DT(E6) DA(D12):DC(E5) DT(D13):DT(E4) DA(D14):DA(E3) DT(D15):DA(E1) chainA (223) ARG254 0 0 1 6 2 0 0 0 0 0 0 0 0 0 prot.sequence ysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy >7zwa_AB:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=CRYOEM STRUCTURE OF KU HETERODIMER BOUND TO DNA AND PAXX organism=? DNA sequence DA(E1):DT(D15) DA(E3):DA(D14) DT(E4):DT(D13) DC(E5):DA(D12) DT(E6):DA(D10) DA(E7):DT(D9) DG(E8):DC(D8) DA(E9):DT(D7) DG(E10):DC(D6) DG(E11):DC(D5) DG(E12):DC(D4) DA(E13):DT(D3) DT(E14):DA(D2) DC(E15):DG(D1) chainA (223) ARG254 0 0 0 0 0 0 0 0 0 2 6 1 0 0 chainB (385) ARG400 0 6 8 2 0 0 0 0 0 0 0 0 0 0 prot.sequence ysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakk >7zwc_c:Homeodomain-like; title=STRUCTURE OF SNAPC:TBP-TFIIA-TFIIB SUB-COMPLEX BOUND TO U5 SNRNA PROMOTER organism=? DNA sequence DT(T-14):DA(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DT(T-11):DA(N11) DT(T-10):DA(N10) DC(T-9):DG(N9) DT(T-8):DA(N8) DG(T-7):DC(N7) DT(T-6):DA(N6) DA(T-5):DT(N5) DA(T-4):DT(N4) DC(T-3):DG(N3) DT(T-2):DA(N2) DC(T-1):DG(N1) DA(T0):DT(N0) DA(T1):DT(N-1) DT(T2):DA(N-2) DT(T3):DA(N-3) DT(T4):DA(N-4) DT(T5):DA(N-5) DC(T6):DG(N-6) DG(T7):DC(N-7) DG(T8):DC(N-8) DG(T9):DC(N-9) DT(T10):DA(N-10) DC(T11):DG(N-11) DC(T12):DG(N-12) DT(T13):DA(N-13) DA(T14):DT(N-14) DG(T15):DC(N-15) DT(T16):DA(N-16) DA(T17):DT(N-17) DC(T18):DG(N-18) DA(T19):DT(N-19) DC(T20):DG(N-20) DT(T21):DA(N-21) DG(T22):DC(N-22) DA(T23):DT(N-23) DT(T24):DA(N-24) DG(T25):DC(N-25) DG(T26):DC(N-26) chainc (290) MET385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 2 0 0 0 0 (293) ILE388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 (294) TYR389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 5 0 prot.sequence edpetclqlnmvyqeviqeklaeanlllaqnreqqeelmrdlagsymghfmkpyfkdkvtgvgppanedtrekaaqgikafeellvtkwknwekallrksvvsdrlqrllqpkllkleylhqkqskvsselerqalekqgreaekeiqdinqlpeeallgnrldshdwekisninfegsrsaeeirkfwqnsehpsinkqewsreeeerlqaiaaahghlewqkiaeelgtsrsafqclqkfqqhnkalkrkewteeedrmltqlvqemrvgshipyrrivyymegrdsMqlIYrwtksldpg >7zwd_c:Homeodomain-like; title=STRUCTURE OF SNAPC CONTAINING POL II PRE-INITIATION COMPLEX BOUND TO U5 SNRNA PROMOTER (CC) organism=? DNA sequence DT(T-39):DA(N39) DG(T-38):DC(N38) DA(T-37):DT(N37) DA(T-36):DT(N36) DG(T-35):DC(N35) DA(T-34):DT(N34) DG(T-33):DC(N33) DA(T-32):DT(N32) DA(T-31):DT(N31) DA(T-30):DT(N30) DC(T-29):DG(N29) DC(T-28):DG(N28) DA(T-27):DT(N27) DG(T-26):DC(N26) DA(T-25):DT(N25) DG(T-24):DC(N24) DT(T-23):DA(N23) DA(T-22):DT(N22) DT(T-21):DA(N21) DA(T-20):DT(N20) DC(T-19):DG(N19) DC(T-18):DG(N18) DA(T-17):DT(N17) DG(T-16):DC(N16) DT(T-15):DA(N15) DT(T-14):DA(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DT(T-11):DA(N11) DT(T-10):DA(N10) DC(T-9):DG(N9) DT(T-8):DA(N8) DG(T-7):DC(N7) DT(T-6):DA(N6) DA(T-5):DT(N5) DA(T-4):DT(N4) DC(T-3):DG(N3) DT(T-2):DA(N2) DC(T-1):DG(N1) DA(T0):DT(N0) DA(T1):DT(N-1) DT(T2):DA(N-2) DT(T3):DA(N-3) DT(T4):DA(N-4) DT(T5):DA(N-5) DC(T6):DG(N-6) DG(T7):DC(N-7) DG(T8):DC(N-8) DG(T9):DC(N-9) DT(T10):DA(N-10) DC(T11):DG(N-11) DC(T12):DG(N-12) DT(T13):DA(N-13) DA(T14):DT(N-14) DG(T15):DC(N-15) DT(T16):DA(N-16) DA(T17):DT(N-17) DC(T18):DG(N-18) DA(T19):DT(N-19) DC(T20):DG(N-20) DT(T21):DA(N-21) DG(T22):DC(N-22) DA(T23):DT(N-23) DT(T24):DA(N-24) DG(T25):DC(N-25) DG(T26):DC(N-26) chainc ( 49) HIS144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) MET385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 (293) ILE388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 (294) TYR389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 8 0 prot.sequence edpetclqlnmvyqeviqeklaeanlllaqnreqqeelmrdlagsymgHfmkpyfkdkvtgvgppanedtrekaaqgikafeellvtkwknwekallrksvvsdrlqrllqpkllkleylhqkqskvsselerqalekqgreaekeiqdinqlpeeallgnrldshdwekisninfegsrsaeeirkfwqnsehpsinkqewsreeeerlqaiaaahghlewqkiaeelgtsrsafqclqkfqqhnkalkrkewteeedrmltqlvqemrvgshipyrrivyymegrdsMqlIYrwtksldpg >7zx8_O:TATA-box_binding_protein-like; title=STRUCTURE OF SNAPC CONTAINING POL II PRE-INITIATION COMPLEX BOUND TO U1 SNRNA PROMOTER (OC) organism=? DNA sequence DC(T-47):DG(N47) DC(T-46):DG(N46) DT(T-45):DA(N45) DG(T-44):DC(N44) DC(T-43):DG(N43) DC(T-42):DG(N42) DA(T-41):DT(N41) DG(T-40):DC(N40) DG(T-39):DC(N39) DT(T-38):DA(N38) DA(T-37):DT(N37) DA(T-36):DT(N36) DG(T-35):DC(N35) DT(T-34):DA(N34) DA(T-33):DT(N33) DG(T-31):DG(N20) DC(T-19):DG(N19) DT(T-18):DA(N18) DC(T-17):DG(N17) DT(T-16):DA(N16) DG(T-15):DC(N15) DC(T-14):DG(N14) DC(T-13):DG(N13) DC(T-12):DG(N12) DC(T-11):DG(N11) DG(T-10):DC(N10) DA(T-9):DT(N9) DC(T-8):DG(N8) DA(T-7):DT(N7) DC(T-6):DG(N6) DA(T-5):DT(N5) DG(T-4):DC(N4) DC(T-3):DG(N3) DC(T-2):DG(N2) DT(T-1):DA(N1) DC(T0):DG(N0) DA(T1):DT(N-1) DT(T2):DA(N-2) DA(T3):DT(N-3) DC(T4):DG(N-4) DG(T5):DC(N-5) DC(T6):DG(N-6) DC(T7):DG(N-7) DT(T8):DA(N-8) DC(T9):DG(N-9) DA(T10):DT(N-10) DC(T11):DG(N-11) DT(T12):DA(N-12) DC(T13):DG(N-13) DT(T14):DA(N-14) DT(T15):DA(N-15) DT(T16):DA(N-16) DA(T17):DT(N-17) DC(T18):DG(N-18) DA(T19):DT(N-19) DC(T20):DG(N-20) DA(T21):DT(N-21) DC(T22):DG(N-22) DA(T23):DT(N-23) DC(T24):DG(N-24) DG(T25):DC(N-25) DG(T26):DC(N-26) chainO ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFAavimrireprttaLiFssgkmvctgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk >7zyg_A:SPOC_domain-like;vWA-like; title=CRYOEM STRUCTURE OF KU HETERODIMER BOUND TO DNA, PAXX AND XLF organism=? DNA sequence DA(D2):DT(E14) DT(D3):DA(E13) DC(D4):DG(E12) DC(D5):DG(E11) DC(D6):DG(E10) DT(D7):DA(E9) DC(D8):DG(E8) DT(D9):DA(E7) DA(D10):DT(E6) DG(D11):DC(E5) DA(D12):DT(E4) DT(D13):DA(E3) DA(D14):DT(E2) DG(E0):DC(D101) chainA (221) ARG254 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence grdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdynpeg >7zyg_AB:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=CRYOEM STRUCTURE OF KU HETERODIMER BOUND TO DNA, PAXX AND XLF organism=? DNA sequence DA(D2):DT(E14) DT(D3):DA(E13) DC(D4):DG(E12) DC(D5):DG(E11) DC(D6):DG(E10) DT(D7):DA(E9) DC(D8):DG(E8) DT(D9):DA(E7) DA(D10):DT(E6) DG(D11):DC(E5) DA(D12):DT(E4) DT(D13):DA(E3) DA(D14):DT(E2) DG(E0):DC(D101) chainA (221) ARG254 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainB (362) ARG400 0 0 0 0 0 0 0 0 0 0 1 1 0 0 prot.sequence grdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdynpeg/aavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvycltevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfpliea >8a0w_AB:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE HIGA2 ANTITOXIN IN COMPLEX WITH OPERATOR DNA organism=Vibrio cholerae DNA sequence DG(D1):DC(C17) DT(D2):DA(C16) DA(D3):DT(C15) DC(D4):DG(C14) DG(D5):DC(C13) DC(D6):DG(C12) DA(D7):DT(C11) DC(D8):DG(C10) DC(D9):DG(C9) DA(D10):DT(C8) DA(D11):DT(C7) DG(D12):DC(C6) DC(D13):DG(C5) DG(D14):DC(C4) DT(D15):DA(C3) DA(D16):DT(C2) DC(D17):DG(C1) chainA ( 20) ARG56 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG68 0 0 9 12 15 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) THR69 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLU71 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN72 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 ( 39) GLN75 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG77 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) SER78 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainB ( 20) ARG56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 32) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 16 14 8 0 0 ( 33) THR69 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 35) GLU71 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 7 0 ( 36) ASN72 0 0 0 0 0 0 0 0 0 0 2 5 1 0 0 0 0 ( 39) GLN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 ( 41) ARG77 0 0 0 0 0 0 0 0 0 0 0 5 11 10 0 0 0 prot.sequence elnispdeivsireqfnmsRgvfarllhtssRTlENweQgRSvpngqavtllklvqrhpetlshiael/elnispdeivsireqfnmsRgvfarllhtssRTlENweQgRsvpngqavtllklvqrhpetlshiael >8a0w_B:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE HIGA2 ANTITOXIN IN COMPLEX WITH OPERATOR DNA organism=Vibrio cholerae DNA sequence DG(C1):DC(D17) DT(C2):DA(D16) DA(C3):DT(D15) DC(C4):DG(D14) DG(C5):DC(D13) DC(C6):DG(D12) DT(C7):DA(D11) DT(C8):DA(D10) DG(C9):DC(D9) DG(C10):DC(D8) DT(C11):DA(D7) DG(C12):DC(D6) DC(C13):DG(D5) DG(C14):DC(D4) DT(C15):DA(D3) DA(C16):DT(D2) DC(C17):DG(D1) chainB ( 20) ARG56 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG68 0 0 8 14 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) THR69 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 35) GLU71 0 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ASN72 0 0 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 ( 39) GLN75 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG77 0 0 0 10 11 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence elnispdeivsireqfnmsRgvfarllhtssRTlENweQgRsvpngqavtllklvqrhpetlshiael >8a0x_ABD:lambda_repressor-like_DNA-binding_domains; title=CRYSTAL STRUCTURE OF THE HIGB2-HIGA2 TETRAMER IN COMPLEX WITH OPERATOR DNA organism=? DNA sequence DG(F2):DC(E31) DG(F3):DC(E30) DA(F4):DT(E29) DA(F5):DT(E28) DG(F6):DC(E27) DT(F7):DA(E26) DG(F8):DC(E25) DT(F9):DA(E24) DA(F10):DT(E23) DC(F11):DG(E22) DG(F12):DC(E21) DC(F13):DG(E20) DA(F14):DT(E19) DC(F15):DG(E18) DC(F16):DG(E17) DA(F17):DT(E16) DA(F18):DT(E15) DG(F19):DC(E14) DC(F20):DG(E13) DG(F21):DC(E12) DT(F22):DA(E11) DA(F23):DT(E10) DC(F24):DG(E9) DA(F25):DT(E8) DG(F26):DC(E7) DA(F27):DT(E6) DT(F28):DA(E5) DG(F29):DC(E4) DC(F31):DG(E2) chainA ( 55) ARG56 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 11 14 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) THR69 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) GLU71 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASN72 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) GLN75 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG77 0 0 0 0 0 0 0 0 0 8 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) SER78 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 55) ARG56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 67) ARG68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 14 11 0 0 0 0 0 0 0 0 ( 68) THR69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 70) GLU71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 4 0 0 0 0 0 0 0 ( 71) ASN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 3 0 0 0 0 0 0 0 0 0 0 ( 74) GLN75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 ( 76) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 12 11 0 0 0 0 0 0 0 0 0 ( 77) SER78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 43) GLN42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 prot.sequence snrdlfaelssalveakqhsegkltlkthhvndvgelnispdeivsireqfnmsRgvfarllhtssRTlENweQgRSvpngqavtllklvqrhpetlshiael/snrdlfaelssalveakqhsegkltlkthhvndvgelnispdeivsireqfnmsRgvfarllhtssRTlENweQgRSvpngqavtllklvqrhpetlshiael/hmksvfvestifekyrdeylsdeeyrlfqaelmlnpklgdviQgtgglrkirvaskgkgkrggsriiyyfldekrrfylltiygknemsdlnanqrkqlmafmeawrneq >8a0x_D: title=CRYSTAL STRUCTURE OF THE HIGB2-HIGA2 TETRAMER IN COMPLEX WITH OPERATOR DNA organism=? DNA sequence DG(E2):DC(F31) DC(E4):DG(F29) DA(E5):DT(F28) DT(E6):DA(F27) DC(E7):DG(F26) DT(E8):DA(F25) DG(E9):DC(F24) DT(E10):DA(F23) DA(E11):DT(F22) DC(E12):DG(F21) DG(E13):DC(F20) DC(E14):DG(F19) DT(E15):DA(F18) DT(E16):DA(F17) DG(E17):DC(F16) DG(E18):DC(F15) DT(E19):DA(F14) DG(E20):DC(F13) DC(E21):DG(F12) DG(E22):DC(F11) DT(E23):DA(F10) DA(E24):DT(F9) DC(E25):DG(F8) DA(E26):DT(F7) DC(E27):DG(F6) DT(E28):DA(F5) DT(E29):DA(F4) DC(E30):DG(F3) DC(E31):DG(F2) chainD ( 43) GLN42 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmksvfvestifekyrdeylsdeeyrlfqaelmlnpklgdviQgtgglrkirvaskgkgkrggsriiyyfldekrrfylltiygknemsdlnanqrkqlmafmeawrneq >8a1c_A:Origin_of_replication-binding_domain,_RBD-like; title=TRAI TRANS-ESTERASE DOMAIN FROM PKM101 (DNA BOUND) organism=? DNA sequence DC(C2) DG(C3) DT(C4) DT(C5) DA(C6) DG(C7) DG(C8) DT(C9) DG(C10):DT(C11) chainA ( 1) MET1 0 0 0 0 0 8 6 16 0 ( 2) LEU2 0 0 0 0 0 1 0 0 0 ( 3) ASP3 0 0 0 0 0 2 11 0 15 ( 5) THR5 0 0 0 0 0 0 0 0 6 ( 76) LYS78 2 0 0 0 0 0 0 0 0 ( 78) ARG80 13 11 5 0 0 0 0 0 0 ( 84) THR86 0 0 0 0 0 0 0 0 6 ( 86) SER88 0 0 0 0 0 0 0 1 0 (179) ASN181 0 5 11 0 0 0 0 0 0 (180) ASP182 0 11 5 0 0 0 0 0 0 (183) MET185 0 0 7 16 0 0 0 0 0 (186) LYS188 0 0 0 9 2 4 0 0 0 (187) MET189 0 0 0 0 0 16 0 0 0 (194) LYS196 0 0 0 0 0 6 0 0 0 (214) ASN216 0 0 0 0 0 0 0 1 0 (216) THR218 0 0 0 0 0 3 0 4 0 (237) ILE239 0 0 0 0 0 0 0 0 5 (248) ARG250 0 0 0 0 0 0 2 0 9 (253) ALA255 0 0 0 0 9 0 0 0 0 (254) GLN256 0 0 0 0 7 0 0 0 0 (256) LYS258 0 0 0 0 0 0 0 0 3 (257) SER259 0 0 0 0 0 0 0 0 3 (260) SER262 0 0 0 0 0 0 0 0 7 (264) ARG266 0 0 0 0 0 0 0 0 2 prot.sequence MLDiTtitrqnvtsvvgyysdakddyyskdsftswqgtgaealglsgdvesarfkellvgeidtfthmqrhvdakKeRlgydlTfSapkgvsmqalihgdktiieahekavaaavreaeklaqarttrqgksvtqntnnlvvatfrhetsraldpdlhthafvmnmtqredgqwralkNDelMrnKMhlgdvyKqelaleltkagyelrynskNnTfdmahfsdeqirafsrrseqIekglaamgltRetadAQtKSrvSmatRekehsreeihqewasraktlgidfdnrewqgalevlf >8a40_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURE OF MAMMALIAN POL II-TFIIS ELONGATION COMPLEX organism=? DNA sequence DG(N6):DT(T32) DA(N7):DT(T31) DG(N8):DG(T30) DA(N9):DG(T29) DG(N10):DG(T28) DC(N11):DT(T27) DG(N12):DG(T26) DG(N13):DA(T25) DC(N14):DG(T24) DG(N26):DC(T23) DG(N27):DC(T22) DA(N28):DT(T21) DG(N29):DC(T20) DC(N30):DG(T19) DC(N31):DG(T18) DA(N32):DT(T17) DG(N33):DC(T16) DC(N34):DG(T15) DA(N35):DT(T14) DG(N36):DC(T13) DG(N37):DC(T12) DG(N38):DC(T11) DA(N39):DT(T10) DG(N40):DC(T9) DC(N41):DG(T8) DT(N42):DA(T7) DG(N43):DC(T6) DG(N44):DC(T5) DG(N45):DC(T4) DA(N46):DT(T3) chainA (417) GLN461 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) PRO462 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (810) THR854 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (811) ALA855 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1356) ARG1416 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip >8a40_ABE: title=STRUCTURE OF MAMMALIAN POL II-TFIIS ELONGATION COMPLEX organism=? DNA sequence DG(N6):DT(T32) DA(N7):DT(T31) DG(N8):DG(T30) DA(N9):DG(T29) DG(N10):DG(T28) DC(N11):DT(T27) DG(N12):DG(T26) DG(N13):DA(T25) DC(N14):DG(T24) DG(N26):DC(T23) DG(N27):DC(T22) DA(N28):DT(T21) DG(N29):DC(T20) DC(N30):DG(T19) DC(N31):DG(T18) DA(N32):DT(T17) DG(N33):DC(T16) DC(N34):DG(T15) DA(N35):DT(T14) DG(N36):DC(T13) DG(N37):DC(T12) DG(N38):DC(T11) DA(N39):DT(T10) DG(N40):DC(T9) DC(N41):DG(T8) DT(N42):DA(T7) DG(N43):DC(T6) DG(N44):DC(T5) DG(N45):DC(T4) DA(N46):DT(T3) chainA (417) GLN461 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) PRO462 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (810) THR854 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (811) ALA855 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1356) ARG1416 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (465) ASP492 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrDgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdgldqtleefkaqfggkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8a4i_K:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF SALL4 ZINC FINGER CLUSTER 4 WITH AT-RICH DNA organism=? DNA sequence DG(E1):DC(F12) DA(E2):DT(F11) DT(E3):DA(F10) DA(E4):DT(F9) DT(E5):DA(F8) DT(E6):DA(F7) DA(E7):DT(F6) DA(E8):DT(F5) DT(E9):DA(F4) DA(E10):DT(F3) DT(E11):DA(F2) DC(E12):DG(F1) chainK ( 12) SER891 1 0 0 0 0 0 0 0 0 0 0 0 ( 14) SER893 2 0 0 0 0 0 0 0 0 0 0 0 ( 40) THR919 0 0 0 1 0 0 0 0 0 0 0 0 ( 43) ASN922 0 0 0 0 9 19 0 0 0 0 0 0 ( 46) VAL925 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence hcctrcgknfsSaSalqiherthtgekpfvcnicgraftTkgNlkVhymthg >8a5p_G: title=STRUCTURE OF ARP4-IES4-N-ACTIN-ARP8-INO80HSA SUBCOMPLEX (A-MODULE) OF CHAETOMIUM THERMOPHILUM INO80 ON CURVED DNA organism=? DNA sequence DC(K75):DG(L-75) DT(K77):DA(L-77) DG(K78):DC(L-78) DT(K79):DA(L-79) DA(K80):DT(L-80) DT(K81):DA(L-81) DT(K82):DA(L-82) DG(K83):DC(L-83) DA(K84):DT(L-84) DA(K85):DT(L-85) DC(K86):DG(L-86) DA(K87):DT(L-87) DG(K88):DC(L-88) DC(K89):DG(L-89) DG(K90):DC(L-90) DA(K91):DT(L-91) DC(K92):DG(L-92) DC(K93):DG(L-93) DT(K94):DA(L-94) DT(K95):DA(L-95) DG(K96):DC(L-96) DC(K97):DG(L-97) DC(K98):DG(L-98) DG(K99):DC(L-99) DG(K100):DC(L-100) DT(K101):DA(L-101) DG(K102):DC(L-102) DC(K103):DG(L-103) DC(K104):DG(L-104) DA(K105):DT(L-105) DG(K106):DC(L-106) DT(K107):DA(L-107) DC(K108):DG(L-108) DG(K109):DC(L-109) DG(K110):DC(L-110) chainG ( 61) ASN780 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lkfqskgynqiydqiwrdlarkdvskvfrlatdsyatkasnlkktailaskeakrwqlrtNkgtkdlqarakrvmrdmmgfwkrnereerdlrkaaerl >8a5p_GU:Actin-like_ATPase_domain; title=STRUCTURE OF ARP4-IES4-N-ACTIN-ARP8-INO80HSA SUBCOMPLEX (A-MODULE) OF CHAETOMIUM THERMOPHILUM INO80 ON CURVED DNA organism=? DNA sequence DC(L-110):DG(K110) DC(L-109):DG(K109) DG(L-108):DC(K108) DA(L-107):DT(K107) DC(L-106):DG(K106) DT(L-105):DA(K105) DG(L-104):DC(K104) DG(L-103):DC(K103) DC(L-102):DG(K102) DA(L-101):DT(K101) DC(L-100):DG(K100) DC(L-99):DG(K99) DG(L-98):DC(K98) DG(L-97):DC(K97) DC(L-96):DG(K96) DA(L-95):DT(K95) DA(L-94):DT(K94) DG(L-93):DC(K93) DG(L-92):DC(K92) DT(L-91):DA(K91) DC(L-90):DG(K90) DG(L-89):DC(K89) DC(L-88):DG(K88) DT(L-87):DA(K87) DG(L-86):DC(K86) DT(L-85):DA(K85) DT(L-84):DA(K84) DC(L-83):DG(K83) DA(L-82):DT(K82) DA(L-81):DT(K81) DT(L-80):DA(K80) DA(L-79):DT(K79) DC(L-78):DG(K78) DA(L-77):DT(K77) DG(L-75):DC(K75) chainG ( 61) ASN780 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 chainU ( 32) LYS36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lkfqskgynqiydqiwrdlarkdvskvfrlatdsyatkasnlkktailaskeakrwqlrtNkgtkdlqarakrvmrdmmgfwkrnereerdlrkaaerl/vservlareglertdngmrqtswpevqpinqKNyytdymkrddqilslrlqneanrerlvktaqmdpskiivihpgsqnlrigfasdalpktipmvlgtqysqtesemhealprrqfegrtmeqqygeewvkkyqkmcsdlkvtmranklkvlpnskdlvvnfnrrtepeiisqhndplqvewtnvnkapedgttqkvfigqqalriaedsspkyklwwpiqhgwlneddyptrahlfddlemlldralrrelgltkkadwkqyscvivipdlydkryvelllhlcieffdlsrvafiqesmaatfgagytqacvvdvgaqktsiscvedglviedsrvnlkyggydvtetfikmmlydnfpyqdinlrrrhdfllaeelkmkyctlsqanisvqafdfhlrapnqptrkyqfkfydevilapmgfydpsifdnstklrgrrklidrsynaydvdmpddptssaqlailamvqpsqrsakeiaaerdavlpiapldvailtsiqhaakgdekkvrelvgsimvvgggakiphfapfleeklkirrpdladrilvsrsaremdeqvvvwkgasvfaklstndswvtnyeykmlgsrciymkllwhy >8a5p_U:Actin-like_ATPase_domain; title=STRUCTURE OF ARP4-IES4-N-ACTIN-ARP8-INO80HSA SUBCOMPLEX (A-MODULE) OF CHAETOMIUM THERMOPHILUM INO80 ON CURVED DNA organism=? DNA sequence DC(K75):DG(L-75) DT(K77):DA(L-77) DG(K78):DC(L-78) DT(K79):DA(L-79) DA(K80):DT(L-80) DT(K81):DA(L-81) DT(K82):DA(L-82) DG(K83):DC(L-83) DA(K84):DT(L-84) DA(K85):DT(L-85) DC(K86):DG(L-86) DA(K87):DT(L-87) DG(K88):DC(L-88) DC(K89):DG(L-89) DG(K90):DC(L-90) DA(K91):DT(L-91) DC(K92):DG(L-92) DC(K93):DG(L-93) DT(K94):DA(L-94) DT(K95):DA(L-95) DG(K96):DC(L-96) DC(K97):DG(L-97) DC(K98):DG(L-98) DG(K99):DC(L-99) DG(K100):DC(L-100) DT(K101):DA(L-101) DG(K102):DC(L-102) DC(K103):DG(L-103) DC(K104):DG(L-104) DA(K105):DT(L-105) DG(K106):DC(L-106) DT(K107):DA(L-107) DC(K108):DG(L-108) DG(K109):DC(L-109) DG(K110):DC(L-110) chainU ( 32) LYS36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vservlareglertdngmrqtswpevqpinqKNyytdymkrddqilslrlqneanrerlvktaqmdpskiivihpgsqnlrigfasdalpktipmvlgtqysqtesemhealprrqfegrtmeqqygeewvkkyqkmcsdlkvtmranklkvlpnskdlvvnfnrrtepeiisqhndplqvewtnvnkapedgttqkvfigqqalriaedsspkyklwwpiqhgwlneddyptrahlfddlemlldralrrelgltkkadwkqyscvivipdlydkryvelllhlcieffdlsrvafiqesmaatfgagytqacvvdvgaqktsiscvedglviedsrvnlkyggydvtetfikmmlydnfpyqdinlrrrhdfllaeelkmkyctlsqanisvqafdfhlrapnqptrkyqfkfydevilapmgfydpsifdnstklrgrrklidrsynaydvdmpddptssaqlailamvqpsqrsakeiaaerdavlpiapldvailtsiqhaakgdekkvrelvgsimvvgggakiphfapfleeklkirrpdladrilvsrsaremdeqvvvwkgasvfaklstndswvtnyeykmlgsrciymkllwhy >8a5q_G: title=STRUCTURE OF ARP4-IES4-N-ACTIN-ARP8-INO80HSA SUBCOMPLEX (A-MODULE) OF CHAETOMIUM THERMOPHILUM INO80 ON STRAIGHT DNA organism=? DNA sequence DG(L-104):DC(K104) DG(L-103):DC(K103) DC(L-102):DG(K102) DA(L-101):DT(K101) DC(L-100):DG(K100) DC(L-99):DG(K99) DG(L-98):DC(K98) DG(L-97):DC(K97) DC(L-96):DG(K96) DA(L-95):DT(K95) DA(L-94):DT(K94) DG(L-93):DC(K93) DG(L-92):DC(K92) DT(L-91):DA(K91) DC(L-90):DG(K90) DG(L-89):DC(K89) DC(L-88):DG(K88) DT(L-87):DA(K87) DG(L-86):DC(K86) DT(L-85):DA(K85) DT(L-84):DA(K84) DC(L-83):DG(K83) DA(L-82):DT(K82) DA(L-81):DT(K81) DT(L-80):DA(K80) DA(L-79):DT(K79) chainG ( 61) ASN780 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence lkfqskgynqiydqiwrdlarkdvskvfrlatdsyatkasnlkktailaskeakrwqlrtNkgtkdlqarakrvmrdmmgfwkrnereerdlrkaae >8a5q_GU:Actin-like_ATPase_domain; title=STRUCTURE OF ARP4-IES4-N-ACTIN-ARP8-INO80HSA SUBCOMPLEX (A-MODULE) OF CHAETOMIUM THERMOPHILUM INO80 ON STRAIGHT DNA organism=? DNA sequence DG(L-104):DC(K104) DG(L-103):DC(K103) DC(L-102):DG(K102) DA(L-101):DT(K101) DC(L-100):DG(K100) DC(L-99):DG(K99) DG(L-98):DC(K98) DG(L-97):DC(K97) DC(L-96):DG(K96) DA(L-95):DT(K95) DA(L-94):DT(K94) DG(L-93):DC(K93) DG(L-92):DC(K92) DT(L-91):DA(K91) DC(L-90):DG(K90) DG(L-89):DC(K89) DC(L-88):DG(K88) DT(L-87):DA(K87) DG(L-86):DC(K86) DT(L-85):DA(K85) DT(L-84):DA(K84) DC(L-83):DG(K83) DA(L-82):DT(K82) DA(L-81):DT(K81) DT(L-80):DA(K80) DA(L-79):DT(K79) chainG ( 61) ASN780 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainU ( 33) LYS36 0 0 0 0 0 0 0 0 0 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ASN37 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lkfqskgynqiydqiwrdlarkdvskvfrlatdsyatkasnlkktailaskeakrwqlrtNkgtkdlqarakrvmrdmmgfwkrnereerdlrkaae/kvservlareglertdngmrqtswpevqpinqKNyytdymkrddqilslrlqneanrerlvktaqmdpskiivihpgsqnlrigfasdalpktipmvlgtqysqtesemhealprrqfegrtmeqqygeewvkkyqkmcsdlkvtmranklkvlpnskdlvvnfnrrtepeiisqhndplqvewtnvnkapedgttqkvfigqqalriaedsspkyklwwpiqhgwlneddyptrahlfddlemlldralrrelgltkkadwkqyscvivipdlydkryvelllhlcieffdlsrvafiqesmaatfgagytqacvvdvgaqktsiscvedglviedsrvnlkyggydvtetfikmmlydnfpyqdinlrrrhdfllaeelkmkyctlsqanisvqafdfhlrapnqptrkyqfkfydevilapmgfydpsifdnstklrgrrklidrsynaydvdmpddptssaqlailamvqpsqrsakeiaaerdavlpiapldvailtsiqhaakgdekkvrelvgsimvvgggakiphfapfleeklkirrpdladrilvsrsaremdeqvvvwkgasvfaklstndswvtnyeykmlgsrciymkllwhy >8a8j_AB:P-loop_containing_nucleoside_triphosphate_hydrolases; title=COMPLEX OF RECF AND DNA FROM THERMUS THERMOPHILUS. organism=? DNA sequence DA(Y7):DT(X19) DT(Y8):DA(X18) DC(Y9):DG(X17) DC(Y10):DG(X16) DG(Y11):DC(X15) DC(Y12):DG(X14) DG(Y13):DC(X13) DG(Y14):DC(X12) DC(Y15):DG(X11) DA(Y16):DT(X10) DG(Y17):DC(X9) DA(Y18):DT(X8) DT(Y19):DA(X7) DC(Y20):DG(X6) DT(Y21):DA(X5) DG(Y22):DC(X4) DG(Y23):DC(X3) DC(Y24):DG(X2) DC(Y25):DG(X1) chainA (155) ARG155 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 chainB (126) GLU126 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (155) ARG155 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrlllfrqrnfrnlaleayrpppglsalvganaqgktslllgihlalggevplgladlvrfgeeeawlhaevetelgayrlehrlgpggrevllngkrvslrtlwelpgsvlvspldleavlgpkeerrayldrliarfsrryaallsayekalRqrnallkaggeglsawdrelarygdeivalrrrflrrfapilrevhaalaakeaglrleetagegvlraleasraeerergqtlvgphrddlvfllegrpahrfasrgeaktlalalrlaehrllgehhgepplllvdewgeeldearrravlayaqalpqailagleappgvpvcsvvrgvvlcp/mrlllfrqrnfrnlaleayrpppglsalvganaqgktslllgihlalggevplgladlvrfgeeeawlhaevetelgayrlehrlgpggrevllngkrvslrtlwelpgsvlvspldleavlgpkEerrayldrliarfsrryaallsayekalRqrnallkaggeglsawdrelarygdeivalrrrflrrfapilrevhaalaakeaglrleetagegvlraleasraeerergqtlvgphrddlvfllegrpahrfasrgeaktlalalrlaehrllgehhgepplllvdewgeeldearrravlayaqalpqailagleappgvpvcsvvrgvvlcp >8a8j_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=COMPLEX OF RECF AND DNA FROM THERMUS THERMOPHILUS. organism=? DNA sequence DA(Y7):DT(X19) DT(Y8):DA(X18) DC(Y9):DG(X17) DC(Y10):DG(X16) DG(Y11):DC(X15) DC(Y12):DG(X14) DG(Y13):DC(X13) DG(Y14):DC(X12) DC(Y15):DG(X11) DA(Y16):DT(X10) DG(Y17):DC(X9) DA(Y18):DT(X8) DT(Y19):DA(X7) DC(Y20):DG(X6) DT(Y21):DA(X5) DG(Y22):DC(X4) DG(Y23):DC(X3) DC(Y24):DG(X2) DC(Y25):DG(X1) chainB (126) GLU126 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (155) ARG155 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrlllfrqrnfrnlaleayrpppglsalvganaqgktslllgihlalggevplgladlvrfgeeeawlhaevetelgayrlehrlgpggrevllngkrvslrtlwelpgsvlvspldleavlgpkEerrayldrliarfsrryaallsayekalRqrnallkaggeglsawdrelarygdeivalrrrflrrfapilrevhaalaakeaglrleetagegvlraleasraeerergqtlvgphrddlvfllegrpahrfasrgeaktlalalrlaehrllgehhgepplllvdewgeeldearrravlayaqalpqailagleappgvpvcsvvrgvvlcp >8a93_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=COMPLEX OF RECF-RECR-DNA FROM THERMUS THERMOPHILUS. organism=? DNA sequence DG(Y5):DC(X21) DG(Y6):DC(X20) DA(Y7):DT(X19) DT(Y8):DA(X18) DC(Y9):DG(X17) DC(Y10):DG(X16) DG(Y11):DC(X15) DC(Y12):DG(X14) DG(Y13):DC(X13) DG(Y14):DC(X12) DC(Y15):DG(X11) DA(Y16):DT(X10) DG(Y17):DC(X9) DA(Y18):DT(X8) DT(Y19):DA(X7) DC(Y20):DG(X6) DT(Y21):DA(X5) DG(Y22):DC(X4) DG(Y23):DC(X3) DC(Y24):DG(X2) DC(Y25):DG(X1) chainA (126) GLU126 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence mrlllfrqrnfrnlaleayrpppglsalvganaqgktslllgihlalggevplgladlvrfgeeeawlhaevetelgayrlehrlgpggrevllngkrvslrtlwelpgsvlvspldleavlgpkEerrayldrliarfsrryaallsayekalrqrnallkaggeglsawdrelarygdeivalrrrflrrfapilrevhaalaakeaglrleetagegvlraleasraeerergqtlvgphrddlvfllegrpahrfasrgeaktlalalrlaehrllgehhgepplllvdewgeeldearrravlayaqalpqailagleappgvpvcsvvrgvvlcp >8a93_AB: title=COMPLEX OF RECF-RECR-DNA FROM THERMUS THERMOPHILUS. organism=? DNA sequence DG(Y5):DC(X21) DG(Y6):DC(X20) DA(Y7):DT(X19) DT(Y8):DA(X18) DC(Y9):DG(X17) DC(Y10):DG(X16) DG(Y11):DC(X15) DC(Y12):DG(X14) DG(Y13):DC(X13) DG(Y14):DC(X12) DC(Y15):DG(X11) DA(Y16):DT(X10) DG(Y17):DC(X9) DA(Y18):DT(X8) DT(Y19):DA(X7) DC(Y20):DG(X6) DT(Y21):DA(X5) DG(Y22):DC(X4) DG(Y23):DC(X3) DC(Y24):DG(X2) DC(Y25):DG(X1) chainA (126) GLU126 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainB (125) GLU126 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 prot.sequence mrlllfrqrnfrnlaleayrpppglsalvganaqgktslllgihlalggevplgladlvrfgeeeawlhaevetelgayrlehrlgpggrevllngkrvslrtlwelpgsvlvspldleavlgpkEerrayldrliarfsrryaallsayekalrqrnallkaggeglsawdrelarygdeivalrrrflrrfapilrevhaalaakeaglrleetagegvlraleasraeerergqtlvgphrddlvfllegrpahrfasrgeaktlalalrlaehrllgehhgepplllvdewgeeldearrravlayaqalpqailagleappgvpvcsvvrgvvlcp/mrlllfrqrnfrnlaleayrpppglsalvganaqgktslllgihlalggevlgladlvrfgeeeawlhaevetelgayrlehrlgpggrevllngkrvslrtlwelpgsvlvspldleavlgpkEerrayldrliarfsrryaallsayekalrqrnallkaggeglsawdrelarygdeivalrrrflrrfapilrevhaalaakeaglrleetagegvlraleasraeerergqtlvgphrddlvfllegrpahrfasrgeaktlalalrlaehrllgehhgepplllvdewgeeldearrravlayaqalpqailagleappgvpvcsvvrgvvlcp >8aag_A:Histone-fold; title=H1-BOUND PALINDROMIC NUCLEOSOME, STATE 1 organism=? DNA sequence DT(J-92):A(b92) A(a-91):DT(I91) A(a-90):DT(I90) DT(J-89):A(b89) A(a-88):DT(I88) DT(J-87):A(b87) DT(J-86):A(b86) G(a-85):C(b85) G(a-84):C(b84) C(a-83):G(b83) C(a-82):G(b82) A(a-81):DT(I81) G(a-80):C(b80) C(a-79):G(b79) DT(J-78):A(b78) A(a-77):DT(I77) G(a-76):C(b76) G(a-75):C(b75) A(a-74):DT(I74) DT(J-73):A(b73) A(a-72):DT(I72) DT(J-71):A(b71) C(a-70):G(b70) A(a-69):DT(I69) C(a-68):G(b68) A(a-67):DT(I67) A(a-66):DT(I66) DT(J-65):A(b65) C(a-64):G(b64) C(a-63):G(b63) C(a-62):G(b62) G(a-61):C(b61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DT(J-17):DG(I18) DT(J-16):DA(I17) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DG(J68):DC(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) DT(J74):DT(I-73) DC(J75):DG(I-75) DC(J76):DG(I-76) DT(J77):DA(I-77) DA(J78):DT(I-78) DG(J79):DC(I-79) DC(J80):DG(I-80) DT(J81):DA(I-81) DG(J82):DC(I-82) DG(J83):DC(I-83) DC(J84):DG(I-84) DC(J85):DG(I-85) DA(J86):DT(I-86) DA(J87):DT(I-87) DT(J88):DA(I-88) DA(J89):DT(I-89) DT(J90):DA(I-91) DT(J91):DT(I-92) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera >8aan_A:"Winged_helix"_DNA-binding_domain; title=THE NUCLEOPROTEIN COMPLEX OF REP PROTEIN WITH ITERON CONTAINING DSDNA AND DUE SSDNA. organism=Escherichia coli DNA sequence DC(C23):DG(B21) DT(C24):DA(B20) DG(C25):DC(B19) DA(C26):DT(B18) DG(C27):DC(B17) DG(C28):DC(B16) DG(C29):DC(B15) DC(C30):DG(B14) DA(C31):DT(B13) DA(C32):DT(B12) DT(C33):DA(B11) DT(C34):DA(B10) DT(C35):DA(B9) DG(C36):DC(B8) DT(C37):DA(B7) DC(C38):DG(B6) DA(C39):DT(B5) DC(C40):DG(B4) DA(C41):DT(B3) DG(C42):DC(B2) DG(C43):DC(B1) chainA ( 66) SER75 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ALA76 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) GLU77 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) SER79 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LYS80 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG83 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) ARG124 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (178) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (180) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 8 3 0 0 (182) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 (183) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 1 0 0 0 0 (186) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 12 0 0 0 0 (187) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 13 14 5 0 0 0 0 0 0 (213) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence tavinhkkrknsprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffiglqnrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrditsm >8aas_A:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE PYROCOCCUS ABYSSI RPA TRIMERIZATION CORE BOUND TO POLY-DT20 SSDNA organism=? DNA sequence DT(F1) DT(F2) DT(F3) DT(F4) DT(F5) DT(F6) DT(F7) DT(F8) DT(F9) DT(F10) DT(F11) DT(F12) DT(F13) DT(F14) chainA ( 26) ARG211 0 0 14 1 0 0 0 0 0 0 0 0 0 0 ( 30) TYR215 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS222 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) MET247 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ILE249 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 79) THR264 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 81) PHE266 0 25 7 0 0 0 0 0 0 0 0 0 0 0 (139) ASP324 0 0 0 0 15 0 0 0 0 0 0 0 0 0 (140) ARG325 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (141) PHE326 0 0 0 0 24 39 0 0 0 0 0 0 0 0 (142) LEU327 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (147) ARG332 0 1 11 1 0 0 0 0 0 0 0 0 0 0 prot.sequence trkkikdieagdrfvevrgtiakvyRvltYdacpecKkkvdydeglgvwicpehgevqpikMtIldfglddgtgyirvTlFgddaeellgvspeeiaekikeleesglttkeaarklaedefyniigreivvrgnvieDRFLglilRasswedvdyrreierikeeleklgvm >8aas_AB:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE PYROCOCCUS ABYSSI RPA TRIMERIZATION CORE BOUND TO POLY-DT20 SSDNA organism=? DNA sequence DT(F1) DT(F2) DT(F3) DT(F4) DT(F5) DT(F6) DT(F7) DT(F8) DT(F9) DT(F10) DT(F11) DT(F12) DT(F13) DT(F14) chainA ( 26) ARG211 0 0 14 1 0 0 0 0 0 0 0 0 0 0 ( 30) TYR215 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS222 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) MET247 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ILE249 0 0 6 0 0 0 0 0 0 0 0 0 0 0 ( 79) THR264 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 81) PHE266 0 25 7 0 0 0 0 0 0 0 0 0 0 0 (139) ASP324 0 0 0 0 15 0 0 0 0 0 0 0 0 0 (140) ARG325 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (141) PHE326 0 0 0 0 24 39 0 0 0 0 0 0 0 0 (142) LEU327 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (147) ARG332 0 1 11 1 0 0 0 0 0 0 0 0 0 0 chainB ( 25) PHE27 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 74) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 76) PHE78 0 0 0 0 0 0 0 0 0 0 0 41 15 0 ( 77) ARG79 0 0 0 0 0 0 0 0 0 0 14 15 0 0 (101) TRP103 0 0 0 0 0 0 0 0 0 0 0 0 28 0 (106) GLN108 0 0 0 0 0 0 0 0 0 0 0 0 11 0 (108) LEU110 0 0 0 0 0 0 0 0 0 0 1 2 0 0 prot.sequence trkkikdieagdrfvevrgtiakvyRvltYdacpecKkkvdydeglgvwicpehgevqpikMtIldfglddgtgyirvTlFgddaeellgvspeeiaekikeleesglttkeaarklaedefyniigreivvrgnvieDRFLglilRasswedvdyrreierikeeleklgvm/krmpatrlyikdilegyfvksegdFepnylitkyarkvyrakivgtvvrepliaedetygkfqvddgtgviwvLgFRddtkfaklvrkgdlvqvigkiaeWrddkQiLvegvskvhpnmwilhryetlkekiehikkakialeiynqygitakskviaknkgieeellevidelygim >8aas_B:Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE PYROCOCCUS ABYSSI RPA TRIMERIZATION CORE BOUND TO POLY-DT20 SSDNA organism=? DNA sequence DT(F1) DT(F2) DT(F3) DT(F4) DT(F5) DT(F6) DT(F7) DT(F8) DT(F9) DT(F10) DT(F11) DT(F12) DT(F13) DT(F14) chainB ( 25) PHE27 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 74) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 76) PHE78 0 0 0 0 0 0 0 0 0 0 0 41 15 0 ( 77) ARG79 0 0 0 0 0 0 0 0 0 0 14 15 0 0 (101) TRP103 0 0 0 0 0 0 0 0 0 0 0 0 28 0 (106) GLN108 0 0 0 0 0 0 0 0 0 0 0 0 11 0 (108) LEU110 0 0 0 0 0 0 0 0 0 0 1 2 0 0 prot.sequence krmpatrlyikdilegyfvksegdFepnylitkyarkvyrakivgtvvrepliaedetygkfqvddgtgviwvLgFRddtkfaklvrkgdlvqvigkiaeWrddkQiLvegvskvhpnmwilhryetlkekiehikkakialeiynqygitakskviaknkgieeellevidelygim >8aby_CD: title=RNA POLYMERASE BOUND TO PURIFIED IN VITRO TRANSCRIBED REGULATORY RNA PUTL - PAUSE PRONE, CLOSED CLAMP STATE organism=? DNA sequence DG(N26):DC(T19) DC(N27):DG(T18) DT(N28):DA(T17) DT(N29):DA(T16) DT(N30):DA(T15) DT(N31):DA(T14) DG(N32):DC(T13) DA(N33):DT(T12) DC(N34):DG(T11) DC(N35):DG(T10) DT(N36):DA(T9) DC(N37):DG(T8) DC(N38):DG(T7) chainC (540) GLU541 19 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 8 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteYEkdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8abz_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE AT U-RICH PAUSE BOUND TO NON-REGULATORY RNA - PAUSE PRONE, CLOSED CLAMP STATE organism=? DNA sequence DG(T1):DC(N295) DC(T2):DG(N294) DC(T3):DG(N293) DG(T4):DC(N292) DT(T5):DA(N291) DG(T6):DC(N290) DA(T7):DT(N289) DC(T8):DG(N288) DT(T9):DA(N287) DA(T10):DT(N286) DA(T11):DT(N285) DA(T12):DT(N284) IGU(T13):DT(N283) chainC (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 5 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >8abz_CD: title=RNA POLYMERASE AT U-RICH PAUSE BOUND TO NON-REGULATORY RNA - PAUSE PRONE, CLOSED CLAMP STATE organism=? DNA sequence DG(T1):DC(N295) DC(T2):DG(N294) DC(T3):DG(N293) DG(T4):DC(N292) DT(T5):DA(N291) DG(T6):DC(N290) DA(T7):DT(N289) DC(T8):DG(N288) DT(T9):DA(N287) DA(T10):DT(N286) DA(T11):DT(N285) DA(T12):DT(N284) IGU(T13):DT(N283) chainC (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 5 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 2 chainD prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteYEkdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8ac0_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE AT U-RICH PAUSE BOUND TO REGULATORY RNA PUTL - ACTIVE, CLOSED CLAMP STATE organism=? DNA sequence DC(N231):DG(T36) DA(N232):DT(T35) DT(N233):DA(T34) DT(N234):DA(T33) DA(N235):DT(T32) DG(N236):DC(T31) DC(N237):DG(T30) DG(N238):DC(T29) DA(N239):DT(T28) DG(N240):DC(T27) DA(N241):DT(T26) DA(N242):DT(T25) DT(N254):DC(T24) DT(N255):DC(T23) DT(N256):DG(T22) DT(N257):DA(T21) DA(N258):DA(T20) DG(N259):DA(T19) DT(N260):DA(T18) DC(N261):DA(T17) DA(N262):DA(T16) DC(N263):DC(T15) DG(N264):IGU(T14) DG(N265):IGU(T13) DC(N266):DA(T12) chainC (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >8ac0_CD: title=RNA POLYMERASE AT U-RICH PAUSE BOUND TO REGULATORY RNA PUTL - ACTIVE, CLOSED CLAMP STATE organism=? DNA sequence DC(N231):DG(T36) DA(N232):DT(T35) DT(N233):DA(T34) DT(N234):DA(T33) DA(N235):DT(T32) DG(N236):DC(T31) DC(N237):DG(T30) DG(N238):DC(T29) DA(N239):DT(T28) DG(N240):DC(T27) DA(N241):DT(T26) DA(N242):DT(T25) DT(N254):DC(T24) DT(N255):DC(T23) DT(N256):DG(T22) DT(N257):DA(T21) DA(N258):DA(T20) DG(N259):DA(T19) DT(N260):DA(T18) DC(N261):DA(T17) DA(N262):DA(T16) DC(N263):DC(T15) DG(N264):IGU(T14) DG(N265):IGU(T13) DC(N266):DA(T12) chainC (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 chainD (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 (246) ALA261 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfAtsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8ac2_CD: title=RNA POLYMERASE- POST-TERMINATED, OPEN CLAMP STATE organism=? DNA sequence DG(T6):DC(N290) DA(T7):DT(N289) DC(T8):DG(N288) DT(T9):DA(N287) DA(T10):DT(N286) DA(T11):DT(N285) DA(T12):DT(N284) IGU(T13):DT(N283) IGU(T14):DT(N282) DC(T15):DG(N281) DA(T16):DT(N280) DA(T17):DT(N279) DA(T18):DT(N278) DA(T19):DT(N277) DA(T20):DT(N276) DA(T21):DT(N275) DG(T22):DC(N274) DC(T23):DG(N273) chainC chainD (320) GLN335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkQgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdptmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >8ac8_A:"Winged_helix"_DNA-binding_domain; title=THE NUCLEOPROTEIN COMPLEX OF REP PROTEIN WITH DUE SSDNA organism=Escherichia coli DNA sequence DA(B1) DT(B2) DT(B3) DT(B4) DT(B5) DT(B6) DA(B7) DT(B8) DA(B9) chainA ( 4) ARG17 0 2 0 0 0 0 0 0 0 ( 6) VAL19 0 4 0 0 0 0 0 0 0 ( 9) ASN22 0 0 0 3 3 0 0 0 0 ( 34) ARG47 12 6 0 0 0 0 0 0 0 (112) LEU142 0 1 0 0 0 0 0 0 0 (114) ASN144 0 0 1 0 0 0 0 0 0 (115) ARG145 0 0 0 2 0 0 0 0 0 (116) PHE146 0 22 35 0 0 0 0 0 0 (118) GLN148 0 1 6 0 0 0 0 0 0 (141) GLN171 0 0 0 0 6 0 0 0 0 (142) TYR172 0 0 0 0 20 21 0 0 0 (150) ILE180 0 0 0 0 0 0 3 2 0 (151) VAL181 0 0 0 0 0 2 0 0 0 (152) SER182 0 0 0 0 0 1 0 0 0 prot.sequence nspRiVqsNdlteaayslsrdqkrmlylfvdqiRksddgiceihvakyaeifgltsaeaskdirqalksfagkevvfyyesfpwfikpahspsrglysvhinpylipffigLqNRFtQfrlsetkeitnpyamrlyeslcQYrkpdgsgIVSlkidwiieryqlpqsyqrmpdfrrrflqvcvneinsrtpmrlsyiekkkgrqtthivfsfrdits >8acp_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE AT U-RICH PAUSE BOUND TO REGULATORY RNA PUTL - INACTIVE, OPEN CLAMP STATE organism=? DNA sequence DG(T4):DC(N263) DT(T5):DA(N262) DG(T6):DC(N261) DA(T7):DT(N260) DC(T8):DG(N259) DT(T9):DA(N258) DA(T10):DT(N257) chainC (199) ARG200 0 0 0 0 0 0 5 (201) ARG202 0 0 0 0 0 0 1 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridRrRklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >8acp_CD: title=RNA POLYMERASE AT U-RICH PAUSE BOUND TO REGULATORY RNA PUTL - INACTIVE, OPEN CLAMP STATE organism=? DNA sequence DG(T4):DC(N263) DT(T5):DA(N262) DG(T6):DC(N261) DA(T7):DT(N260) DC(T8):DG(N259) DT(T9):DA(N258) DA(T10):DT(N257) chainC (199) ARG200 0 0 0 0 0 0 5 (201) ARG202 0 0 0 0 0 0 1 chainD prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridRrRklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkRkKltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa >8ad1_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE AT U-RICH PAUSE BOUND TO RNA PUTL TRIPLE MUTANT - PAUSE PRONE, CLOSED CLAMP STATE organism=? DNA sequence DC(N231):DG(T36) DA(N232):DT(T35) DT(N233):DA(T34) DT(N234):DA(T33) DA(N235):DT(T32) DG(N236):DC(T31) DC(N237):DG(T30) DG(N238):DC(T29) DA(N239):DT(T28) DG(N240):DC(T27) DA(N241):DT(T26) DA(N242):DT(T25) DT(N254):DC(T24) DT(N255):DC(T23) DT(N256):DG(T22) DT(N257):DA(T21) DA(N258):DA(T20) DG(N259):DA(T19) DT(N260):DA(T18) DC(N261):DA(T17) DA(N262):DA(T16) DC(N263):DC(T15) DG(N264):IGU(T14) DG(N265):IGU(T13) DC(N266):DA(T12) chainC (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 12 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >8ad1_CD: title=RNA POLYMERASE AT U-RICH PAUSE BOUND TO RNA PUTL TRIPLE MUTANT - PAUSE PRONE, CLOSED CLAMP STATE organism=? DNA sequence DA(T12):DC(N266) IGU(T13):DG(N265) IGU(T14):DG(N264) DC(T15):DC(N263) DA(T16):DA(N262) DA(T17):DC(N261) DA(T18):DT(N260) DA(T19):DG(N259) DA(T20):DA(N258) DA(T21):DT(N257) DG(T22):DT(N256) DC(T23):DT(N255) DC(T24):DT(N254) DT(T25):DA(N242) DT(T26):DA(N241) DC(T27):DG(N240) DT(T28):DA(N239) DC(T29):DG(N238) DG(T30):DC(N237) DC(T31):DG(N236) DT(T32):DA(N235) DA(T33):DT(N234) DA(T34):DT(N233) DT(T35):DA(N232) DG(T36):DC(N231) chainC (540) GLU541 0 24 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 chainD (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (246) ALA261 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (247) THR262 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfATsdlndlyRrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8ag6_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MUTSALPHA (MSH2/MSH6) BINDING TO DNA WITH A GT MISMATCH organism=? DNA sequence DG(F16):DC(E35) DC(F17):DG(E34) DA(F18):DT(E33) DC(F19):DG(E32) DC(F20):DG(E31) DG(F21):DC(E30) DA(F22):DT(E29) DG(F23):DC(E28) DC(F24):DG(E27) DT(F25):DA(E26) DT(F26):DG(E25) DG(F27):DC(E24) DA(F28):DT(E23) DT(F29):DA(E22) DC(F30):DG(E21) DC(F31):DG(E20) DT(F32):DA(E19) DC(F33):DG(E18) DG(F34):DC(E17) DA(F35):DT(E16) DT(F36):DA(E15) DG(F37):DC(E14) DA(F38):DT(E13) DT(F39):DA(E12) DC(F40):DG(E11) chainA chainB ( 71) VAL429 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LYS431 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) PHE432 0 0 0 0 0 0 0 0 0 0 48 17 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) GLU434 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) MET452 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) PRO462 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence avqpketlqlesaaevgfvrffqgmpekptttvrlfdrgdfytahgedallaarevfktqgvikymgpagaknlqsvvlskmnfesfvkdlllvrqyrvevyknragkendwylaykaspgnlsqfedilfgnndmsasigvvgvkmsavdgqrqvgvgyvdsiqrklglcefpdndqfsnlealliqigpkecvlpggetagdmgklrqiiqrggiliterkkadfstkdiyqdlnrllkgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfqgsqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssaqfgyyfrvtckeekvlrnnknfstvdiqkngvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqdeiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvgvstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleefqykkcylereqgekiiqeflskvkqmpfeenitiklkqlkaeviaknnsfvneiisrikvtt/ssrptvwyhetlewlkeekrrdehrrrpdhpdfdastlyvpedflnsctpgmrkwwqiksqnfdlvicykVgKFyElyhmdaligvselglvfMkgnwahsgfPeiafgrysdslvqkgykvarveqtetpemmearcrkmahiskydrvvrreicriitkgtqtysvlegdpsenyskyllslkekeedssghtraygvcfvdtslgkffigqfsddrhcsrfrtlvahyppvqvlfekgnlsketktilksslscslqeglipgsqfwdasktlrtlleeeyfreklsdgigvmlpqvlkgmtsesdsigltpgekselalsalggcvfylkkclidqellsmanfeeyipldsdtftkayqrmvldavtlnnleiflngtngstegtllervdtchtpfgkrllkqwlcaplcnhyaindrldaiedlmvvpdkisevvellkklpdlerllskihnvgsplksqnhpdsraimyeettyskkkiidflsalegfkvmckiigimeevadgfkskilkqvislqtknpegrfpdltvelnrwdtafdhekarktglitpkagfdsdydqaladireneqslleylekqrnrigcrtivywgigrnryqleipenfttrnlpeeyelkstkkgckrywtktiekklanlinaeerrdvslkdcmrrlfynfdknykdwqsaveciavldvllclanysrggdgpmcrpvillpedtppflelkgsrhpcitkddfipndiligceeeeqengkaycvlvtgpnmggkstlmrqagllavmaqmgcyvpaevcrltpidrvftrlgasdrstffvelsetasilmhatahslvlvdelgrgtatfdgtaianavvkelaetikcrtlfsthyhslvedysqnvavrlghmacmvenetitflykfikgacpksygfnaarlanlpeeviqkghrkarefekmnqslrlfrevclasersdaeavhklltlikel >8ag6_B:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN MUTSALPHA (MSH2/MSH6) BINDING TO DNA WITH A GT MISMATCH organism=? DNA sequence DG(F16):DC(E35) DC(F17):DG(E34) DA(F18):DT(E33) DC(F19):DG(E32) DC(F20):DG(E31) DG(F21):DC(E30) DA(F22):DT(E29) DG(F23):DC(E28) DC(F24):DG(E27) DT(F25):DA(E26) DT(F26):DG(E25) DG(F27):DC(E24) DA(F28):DT(E23) DT(F29):DA(E22) DC(F30):DG(E21) DC(F31):DG(E20) DT(F32):DA(E19) DC(F33):DG(E18) DG(F34):DC(E17) DA(F35):DT(E16) DT(F36):DA(E15) DG(F37):DC(E14) DA(F38):DT(E13) DT(F39):DA(E12) DC(F40):DG(E11) chainB ( 71) VAL429 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LYS431 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) PHE432 0 0 0 0 0 0 0 0 0 0 48 17 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) GLU434 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) MET452 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) PRO462 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssrptvwyhetlewlkeekrrdehrrrpdhpdfdastlyvpedflnsctpgmrkwwqiksqnfdlvicykVgKFyElyhmdaligvselglvfMkgnwahsgfPeiafgrysdslvqkgykvarveqtetpemmearcrkmahiskydrvvrreicriitkgtqtysvlegdpsenyskyllslkekeedssghtraygvcfvdtslgkffigqfsddrhcsrfrtlvahyppvqvlfekgnlsketktilksslscslqeglipgsqfwdasktlrtlleeeyfreklsdgigvmlpqvlkgmtsesdsigltpgekselalsalggcvfylkkclidqellsmanfeeyipldsdtftkayqrmvldavtlnnleiflngtngstegtllervdtchtpfgkrllkqwlcaplcnhyaindrldaiedlmvvpdkisevvellkklpdlerllskihnvgsplksqnhpdsraimyeettyskkkiidflsalegfkvmckiigimeevadgfkskilkqvislqtknpegrfpdltvelnrwdtafdhekarktglitpkagfdsdydqaladireneqslleylekqrnrigcrtivywgigrnryqleipenfttrnlpeeyelkstkkgckrywtktiekklanlinaeerrdvslkdcmrrlfynfdknykdwqsaveciavldvllclanysrggdgpmcrpvillpedtppflelkgsrhpcitkddfipndiligceeeeqengkaycvlvtgpnmggkstlmrqagllavmaqmgcyvpaevcrltpidrvftrlgasdrstffvelsetasilmhatahslvlvdelgrgtatfdgtaianavvkelaetikcrtlfsthyhslvedysqnvavrlghmacmvenetitflykfikgacpksygfnaarlanlpeeviqkghrkarefekmnqslrlfrevclasersdaeavhklltlikel >8amd_A:P-loop_containing_nucleoside_triphosphate_hydrolases;RecA_protein,_C-terminal_domain; title=CRYO-EM STRUCTURE OF THE RECA PRESYNAPTIC FILAMENT FROM S.PNEUMONIAE organism=? DNA sequence DT(D1012) DT(D1011) DT(D1010) DT(D1009) DT(D1008) DT(D1007) DT(D1006) DT(D1005) DT(D1004) DT(D1003) DT(D1002):DT(D1003) chainA (169) VAL177 0 0 4 0 0 0 0 0 0 0 0 (174) ARG182 0 0 0 8 4 0 0 0 0 0 0 (204) VAL212 6 0 0 0 0 0 0 0 0 0 0 prot.sequence eeiskkfgaerekalndalkliekdfgkgsimrlgeraeqkvqvmssgslaldialgsggypkgriieiygpessgkttvalhavaqaqkeggiaafidaehaldpayaaalgvnidelllsqpdsgeqgleiagklidsgavdlvvvdsvaalvpraeidgdigdshVglqaRmmsqamrklgasinktktiaifinqlrEkVgvmfgnpettpggralkfyasvrldvrgntqikgtgdqketnvgketkikvvknkvappfkeavveimygegisktgellkiasdldiikkagawysykdekigqgsenakkylaehpeifdeidkqvr >8amd_ABFG:P-loop_containing_nucleoside_triphosphate_hydrolases;RecA_protein,_C-terminal_domain; title=CRYO-EM STRUCTURE OF THE RECA PRESYNAPTIC FILAMENT FROM S.PNEUMONIAE organism=? DNA sequence DT(D1012) DT(D1011) DT(D1010) DT(D1009) DT(D1008) DT(D1007) DT(D1006) DT(D1005) DT(D1004) DT(D1003) DT(D1002):DT(D1003) chainA (169) VAL177 0 0 4 0 0 0 0 0 0 0 0 (174) ARG182 0 0 0 8 4 0 0 0 0 0 0 (204) VAL212 6 0 0 0 0 0 0 0 0 0 0 chainB (169) VAL177 0 0 0 0 0 3 0 0 0 0 0 (174) ARG182 0 0 0 0 0 0 5 3 0 0 0 (202) GLU210 0 0 4 0 0 0 0 0 0 0 0 (203) LYS211 0 0 0 1 0 0 0 0 0 0 0 (204) VAL212 0 0 7 5 0 0 0 0 0 0 0 chainF (169) VAL177 0 0 0 0 0 0 0 0 2 0 0 (202) GLU210 0 0 0 0 0 5 0 0 0 0 0 (204) VAL212 0 0 0 0 0 8 7 0 0 0 0 chainG (202) GLU210 0 0 0 0 0 0 0 0 3 0 0 (204) VAL212 0 0 0 0 0 0 0 0 9 6 6 prot.sequence eeiskkfgaerekalndalkliekdfgkgsimrlgeraeqkvqvmssgslaldialgsggypkgriieiygpessgkttvalhavaqaqkeggiaafidaehaldpayaaalgvnidelllsqpdsgeqgleiagklidsgavdlvvvdsvaalvpraeidgdigdshVglqaRmmsqamrklgasinktktiaifinqlrEkVgvmfgnpettpggralkfyasvrldvrgntqikgtgdqketnvgketkikvvknkvappfkeavveimygegisktgellkiasdldiikkagawysykdekigqgsenakkylaehpeifdeidkqvr/eeiskkfgaerekalndalkliekdfgkgsimrlgeraeqkvqvmssgslaldialgsggypkgriieiygpessgkttvalhavaqaqkeggiaafidaehaldpayaaalgvnidelllsqpdsgeqgleiagklidsgavdlvvvdsvaalvpraeidgdigdshVglqaRmmsqamrklgasinktktiaifinqlrEKVgvmfgnpettpggralkfyasvrldvrgntqikgtgdqketnvgketkikvvknkvappfkeavveimygegisktgellkiasdldiikkagawysykdekigqgsenakkylaehpeifdeidkqvr/eeiskkfgaerekalndalkliekdfgkgsimrlgeraeqkvqvmssgslaldialgsggypkgriieiygpessgkttvalhavaqaqkeggiaafidaehaldpayaaalgvnidelllsqpdsgeqgleiagklidsgavdlvvvdsvaalvpraeidgdigdshVglqarmmsqamrklgasinktktiaifinqlrEkVgvmfgnpettpggralkfyasvrldvrgntqikgtgdqketnvgketkikvvknkvappfkeavveimygegisktgellkiasdldiikkagawysykdekigqgsenakkylaehpeifdeidkqvr/eeiskkfgaerekalndalkliekdfgkgsimrlgeraeqkvqvmssgslaldialgsggypkgriieiygpessgkttvalhavaqaqkeggiaafidaehaldpayaaalgvnidelllsqpdsgeqgleiagklidsgavdlvvvdsvaalvpraeidgdigdshvglqarmmsqamrklgasinktktiaifinqlrEkVgvmfgnpettpggralkfyasvrldvrgntqikgtgdqketnvgketkikvvknkvappfkeavveimygegisktgellkiasdldiikkagawysykdekigqgsenakkylaehpeifdeidkqvr >8amu_AB: title=REPB PMV158 OBD DOMAIN BOUND TO DDR REGION organism=Streptococcus agalactiae DNA sequence DA(D16):DT(C27) DA(D17):DT(C26) DA(D18):DT(C25) DA(D19):DT(C24) DG(D20):DC(C23) DT(D21):DA(C22) DC(D22):DG(C21) DG(D23):DC(C20) DC(D24):DG(C19) DC(D25):DG(C18) DG(D26):DC(C17) DA(D27):DT(C16) DA(D28):DT(C15) DA(D29):DT(C14) DA(D30):DT(C13) DG(D31):DC(C12) DT(D32):DA(C11) DC(D33):DG(C10) DG(D34):DC(C9) DC(D35):DG(C8) DC(D36):DG(C7) DG(D37):DC(C6) DA(D38):DT(C5) chainA ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 6 0 0 0 ( 68) ASP69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 5 2 0 0 0 ( 69) SER70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 71) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 ( 72) LYS73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 chainB ( 2) LYS3 0 0 0 0 0 0 0 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) THR67 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ASP69 0 0 0 0 0 1 6 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER70 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG72 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LYS73 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aKekaryftfllypesipsdwelkletlgvpmaisplhdkdkssikgqkykkahyhvlyiaknpvtaDSvRKkiklllgekslamvqvvlnvenmylyltheskdaiakkkhvydkadiklinnfdidryv/aKekaryftfllypesipsdwelkletlgvpmaisplhdkdkssikgqkykkahyhvlyiaknpvTaDSvRKkiklllgekslamvqvvlnvenmylyltheskdaiakkkhvydkadiklinnfdidryv >8amu_E: title=REPB PMV158 OBD DOMAIN BOUND TO DDR REGION organism=Streptococcus agalactiae DNA sequence DT(G5):DA(H38) DC(G6):DG(H37) DG(G7):DC(H36) DG(G8):DC(H35) DC(G9):DG(H34) DG(G10):DC(H33) DA(G11):DT(H32) DC(G12):DG(H31) DT(G13):DA(H30) DT(G14):DA(H29) DT(G15):DA(H28) DT(G16):DA(H27) DC(G17):DG(H26) DG(G18):DC(H25) DG(G19):DC(H24) DC(G20):DG(H23) DG(G21):DC(H22) DA(G22):DT(H21) DC(G23):DG(H20) DT(G24):DA(H19) DT(G25):DA(H18) DT(G26):DA(H17) DT(G27):DA(H16) chainE ( 2) LYS3 0 0 0 5 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ASP69 0 0 0 1 5 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG72 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LYS73 0 0 0 0 0 0 5 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aKekaryftfllypesipsdwelkletlgvpmaisplhdkdkssikgqkykkahyhvlyiaknpvtaDsvRKkiklllgekslamvqvvlnvenmylyltheskdaiakkkhvydkadiklinnfdidryv >8amu_EF: title=REPB PMV158 OBD DOMAIN BOUND TO DDR REGION organism=Streptococcus agalactiae DNA sequence DA(H16):DT(G27) DA(H17):DT(G26) DA(H18):DT(G25) DA(H19):DT(G24) DG(H20):DC(G23) DT(H21):DA(G22) DC(H22):DG(G21) DG(H23):DC(G20) DC(H24):DG(G19) DC(H25):DG(G18) DG(H26):DC(G17) DA(H27):DT(G16) DA(H28):DT(G15) DA(H29):DT(G14) DA(H30):DT(G13) DG(H31):DC(G12) DT(H32):DA(G11) DC(H33):DG(G10) DG(H34):DC(G9) DC(H35):DG(G8) DC(H36):DG(G7) DG(H37):DC(G6) DA(H38):DT(G5) chainE ( 2) LYS3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 5 0 0 0 ( 68) ASP69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 5 1 0 0 0 ( 71) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 ( 72) LYS73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 5 0 0 0 0 0 0 chainF ( 3) LYS3 0 0 0 0 0 0 0 3 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) THR67 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASP69 0 0 0 0 0 1 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) SER70 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) ARG72 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LYS73 0 0 0 5 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aKekaryftfllypesipsdwelkletlgvpmaisplhdkdkssikgqkykkahyhvlyiaknpvtaDsvRKkiklllgekslamvqvvlnvenmylyltheskdaiakkkhvydkadiklinnfdidryv/qaKekaryftfllypesipsdwelkletlgvpmaisplhdkdkssikgqkykkahyhvlyiaknpvTaDSvRKkiklllgekslamvqvvlnvenmylyltheskdaiakkkhvydkadiklinnfdidryv >8ap1_AB:DNA/RNA_polymerases;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH TWO GTP MOLECULES POISED FOR DE NOVO INITIATION (IC2) organism=? DNA sequence DG(T8):DC(N133) DC(T9):DG(N132) DA(T10):DT(N131) DT(T11):DA(N130) DT(T12):DA(N129) DA(T13):DT(N128) DT(T14):DA(N127) DC(T15):DG(N126) DT(T16):DA(N125) DA(T17):DT(N124) DC(T18):DA(N123) DC(T19):DA(N122) DG(T20):DT(N121) DA(T21):DG(N120) DC(T22):DA(N119) DA(T23):DA(N118) DA(T24):DT(N117) DT(T25):DA(N116) DA(T26):DT(N115) DT(T27):DA(N114) DC(T28):DG(N113) DA(T29):DT(N112) DA(T30):DT(N111) DT(T31):DA(N110) DA(T32):DT(N109) DC(T33):DG(N108) DT(T34):DA(N107) chainB ( 15) PHE16 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) TYR335 0 0 0 0 0 0 0 0 0 2 7 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (335) GLN336 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (142) ARG533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (145) ILE536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (173) GLN594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (219) TYR640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (220) HIS641 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ASN642 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (223) SER644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (224) LYS645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 (278) ARG699 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (406) ARG827 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (594) GLN1015 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (598) THR1019 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (601) TYR1022 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (603) VAL1024 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (606) VAL1027 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (610) PHE1031 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (611) GLN1032 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (706) LYS1127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (708) GLN1129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 0 0 (717) PHE1138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 (718) ILE1139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (730) ARG1151 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (738) PRO1159 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (742) HIS1163 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence inffeiynslptleekkafesalnifnqdrqkvlenrateaarerwkhdfeeakarknlnvklwkwynemlplvkeeinhcrsllseklsdkkglnkvdtnrlgygpyltlidpgkmcvitilellklnstggviegmrtaRavIsvgkaiemefrseqvlksesqakilwpQsirarigsvlismliqvakvsvqgvdpvtkakvhgeapafahgyqYHNgSKlgvlkihktlirqlngerliasvqpqllpmlvepkpwvnwrsggyhytqstllRtkdspeqvaylkaasdngdidrvydglnvlgrtpwtvnrkvfdvvsqvwnkgegfldipgaqdemvlppappknsdpsilrawklqvktiankfssdrsnrcdtnykleiaraflgeklyfphnldfRgrayplsphfnhlgndmsrgllifwhgkklgpsglkwlkihlsnlfgfdklplkdrvafteshlqdikdsaenpltgdrwwttadkpwqalatcfelnevmkmdnpeefishqpvhqdgtcnglqhyaalggdvegatqvnlvpsdkpqdvyahvarlvqkrleiaaekgdenakilkdkitrkvvkQtvmTnvYgVtyVgatFQiakqlspifddrkesldfskyltkhvfsairelfhsahliqdwlgesakrisksirldvdeksfkngnkpdfmssviwttplglpivqpyreesKkQvetnlqtvFIsdpfavnpvnaRrqkaglpPnfiHsldashmllsaaecgkqgldfasvhdsywthasdidtmnvvlreqfiklhevdlvlrlkeefdqryknyvkigklkrstdlaqkiirirkdlsrklgrsttladeiyfekkrqellnspliedrnvgekmvttvslfeditdldamsvllplrlpeippkgdfdvtvlrnsqyffs/svpipgikdisklkFfygfkylwnptvynkifdkldltktykhpeelkvldlypgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrdpYdWstysnlideerifvpevqssdhindkfltvanvtgegsEgLiMQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmdfvdmYQtehs >8ap1_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH TWO GTP MOLECULES POISED FOR DE NOVO INITIATION (IC2) organism=? DNA sequence DG(T8):DC(N133) DC(T9):DG(N132) DA(T10):DT(N131) DT(T11):DA(N130) DT(T12):DA(N129) DA(T13):DT(N128) DT(T14):DA(N127) DC(T15):DG(N126) DT(T16):DA(N125) DA(T17):DT(N124) DC(T18):DA(N123) DC(T19):DA(N122) DG(T20):DT(N121) DA(T21):DG(N120) DC(T22):DA(N119) DA(T23):DA(N118) DA(T24):DT(N117) DT(T25):DA(N116) DA(T26):DT(N115) DT(T27):DA(N114) DC(T28):DG(N113) DA(T29):DT(N112) DA(T30):DT(N111) DT(T31):DA(N110) DA(T32):DT(N109) DC(T33):DG(N108) DT(T34):DA(N107) chainB ( 15) PHE16 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) TYR335 0 0 0 0 0 0 0 0 0 2 7 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (335) GLN336 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence svpipgikdisklkFfygfkylwnptvynkifdkldltktykhpeelkvldlypgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrdpYdWstysnlideerifvpevqssdhindkfltvanvtgegsEgLiMQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmdfvdmYQtehs >8apm_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=SYMMETRIC HEXAMER OF VACCINIA VIRUS DNA HELICASE D5 organism=? DNA sequence DC(X1):DG(Y8) DC(X2):DG(Y7) DG(X3):DC(Y6) DA(X4):DT(Y5) DA(X5):DT(Y4) DT(X6):DA(Y3) DC(X7):DG(Y2) chainA ( 1) ALA321 0 0 0 0 0 1 0 chainE ( 67) ARG387 0 0 0 0 0 0 6 chainD ( 67) ARG387 0 0 0 0 0 0 3 chainB chainC chainF ( 1) ALA321 0 0 0 0 0 0 3 ( 67) ARG387 0 0 0 0 0 0 5 prot.sequence Amgnklfniaqrildtnsvlltergdyivwinnswkfnseeplitklilsirhqlpkeyssellcprkrktveanirdmlvdsvetdtypdklpfkngvldlvdgmfysgddakkytctvstgfkfddtkfvedspemeelmniindiqpltdenkknrelyektlssclcgatkgcltfffgetatgksttkrllksaigdlfvetgqtiltdvldkgpnpfianmhlkrsvfcselpdfacsgskkirsdnikkltepcvigrpcfsnkinnrnhatiiidtnykpvfdridnalmrriavvrfrthfsydkvklldegldgkiqnnryrfaflyllvkwykkyhvpimklyptpee/Amgnklfniaqrildtnsvlltergdyivwinnswkfnseeplitklilsirhqlpkeyssellcprkrktveanirdmlvdsvetdtypdklpfkngvldlvdgmfysgddakkytctvstgfkfddtkfvedspemeelmniindiqpltdenkknrelyektlssclcgatkgcltfffgetatgksttkrllksaigdlfvetgqtiltdvldkgpnpfianmhlkrsvfcselpdfacsgskkirsdnikkltepcvigrpcfsnkinnrnhatiiidtnykpvfdridnalmrriavvrfrthfsydkvklldegldgkiqnnryrfaflyllvkwykkyhvpimklyptpeeipdfafylkigtllvsssvkhiplmtdlskkgyilydnvvtlplttfqqkiskyfnsrlfghdiesfinrhkkfanvsdeylqyifiedi/Amgnklfniaqrildtnsvlltergdyivwinnswkfnseeplitklilsirhqlpkeyssellcprkrktveanirdmlvdsvetdtypdklpfkngvldlvdgmfysgddakkytctvstgfkfddtkfvedspemeelmniindiqpltdenkknrelyektlssclcgatkgcltfffgetatgksttkrllksaigdlfvetgqtiltdvldkgpnpfianmhlkrsvfcselpdfacsgskkirsdnikkltepcvigrpcfsnkinnrnhatiiidtnykpvfdridnalmrriavvrfrthfsydkvklldegldgkiqnnryrfaflyllvkwykkyhvpimklyptpeeipdfafylkigtllvsssvkhiplmtdlskkgyilydnvvtlplttfqqkiskyfnsrlfghdiesfinrhkkfanvsdeylqyifiedi/amgnklfniaqrildtnsvlltergdyivwinnswkfnseeplitklilsirhqlpkeyssellcpRkrktveanirdmlvdsvetdtypdklpfkngvldlvdgmfysgddakkytctvstgfkfddtkfvedspemeelmniindiqpltdenkknrelyektlssclcgatkgcltfffgetatgksttkrllksaigdlfvetgqtiltdvldkgpnpfianmhlkrsvfcselpdfacsgskkirsdnikkltepcvigrpcfsnkinnrnhatiiidtnykpvfdridnalmrriavvrfrthfsydkvklldegldgkiqnnryrfaflyllvkwykkyhvpimklyptpeeipdfafylkigtllvsssvkhiplmtdlskkgyilydnvvtlplttfqqkiskyfnsrlfghdiesfinrhkkfanvsdeylqyifiedi/amgnklfniaqrildtnsvlltergdyivwinnswkfnseeplitklilsirhqlpkeyssellcpRkrktveanirdmlvdsvetdtypdklpfkngvldlvdgmfysgddakkytctvstgfkfddtkfvedspemeelmniindiqpltdenkknrelyektlssclcgatkgcltfffgetatgksttkrllksaigdlfvetgqtiltdvldkgpnpfianmhlkrsvfcselpdfacsgskkirsdnikkltepcvigrpcfsnkinnrnhatiiidtnykpvfdridnalmrriavvrfrthfsydkvklldegldgkiqnnryrfaflyllvkwykkyhvpimklyptpeeipdfafylkigtllvsssvkhiplmtdlskkgyilydnvvtlplttfqqkiskyfnsrlfghdiesfinrhkkfanvsdeylqyifiedi/AmgnklfniaqrildtnsvlltergdyivwinnswkfnseeplitklilsirhqlpkeyssellcpRkrktveanirdmlvdsvetdtypdklpfkngvldlvdgmfysgddakkytctvstgfkfddtkfvedspemeelmniindiqpltdenkknrelyektlssclcgatkgcltfffgetatgksttkrllksaigdlfvetgqtiltdvldkgpnpfianmhlkrsvfcselpdfacsgskkirsdnikkltepcvigrpcfsnkinnrnhatiiidtnykpvfdridnalmrriavvrfrthfsydkvklldegldgkiqnnryrfaflyllvkwykkyhvpimklyptpee >8apm_F:P-loop_containing_nucleoside_triphosphate_hydrolases; title=SYMMETRIC HEXAMER OF VACCINIA VIRUS DNA HELICASE D5 organism=? DNA sequence DC(X1):DG(Y8) DC(X2):DG(Y7) DG(X3):DC(Y6) DA(X4):DT(Y5) DA(X5):DT(Y4) DT(X6):DA(Y3) DC(X7):DG(Y2) chainF ( 1) ALA321 0 0 0 0 0 0 3 ( 67) ARG387 0 0 0 0 0 0 5 prot.sequence AmgnklfniaqrildtnsvlltergdyivwinnswkfnseeplitklilsirhqlpkeyssellcpRkrktveanirdmlvdsvetdtypdklpfkngvldlvdgmfysgddakkytctvstgfkfddtkfvedspemeelmniindiqpltdenkknrelyektlssclcgatkgcltfffgetatgksttkrllksaigdlfvetgqtiltdvldkgpnpfianmhlkrsvfcselpdfacsgskkirsdnikkltepcvigrpcfsnkinnrnhatiiidtnykpvfdridnalmrriavvrfrthfsydkvklldegldgkiqnnryrfaflyllvkwykkyhvpimklyptpee >8asc_EF:SPOC_domain-like;vWA-like; title=KU70/80 BINDS TO THE KU-BINDING MOTIF OF PAXX organism=? DNA sequence DC(H15):DG(G14) DG(H16):DC(G12) DG(H18):DC(G11) DC(H19):DG(G10) DC(H20):DG(G9) DC(H21):DG(G8) DT(H22):DA(G7) DC(H23):DG(G6) DG(H24):DC(G5) DA(H25):DT(G4) DT(H26):DA(G3) DC(H27):DG(G2) DC(H28):DG(G1) chainE (216) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 1 chainF (265) ARG271 0 0 0 0 0 0 2 0 0 0 0 0 0 (394) ARG400 0 2 11 1 0 0 0 0 0 0 0 0 0 prot.sequence sgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisirvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdyn/sgnkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslgkedgsgdgpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieak >8asc_OP:SPOC_domain-like;vWA-like; title=KU70/80 BINDS TO THE KU-BINDING MOTIF OF PAXX organism=? DNA sequence DG(R16):DC(Q12) DG(R18):DC(Q11) DC(R19):DG(Q10) DC(R20):DG(Q9) DC(R21):DG(Q8) DT(R22):DA(Q7) DC(R23):DG(Q6) DG(R24):DC(Q5) DA(R25):DT(Q4) DT(R26):DA(Q3) DC(R27):DG(Q2) DC(R28):DG(Q1) chainO (217) ARG254 0 0 0 0 0 0 0 0 0 0 4 4 chainP (259) ARG271 0 0 0 0 0 2 0 0 0 0 0 0 prot.sequence sgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisilrvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdyn/sgnkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslgdgpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkranpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieak >8atf_Q:Histone-fold; title=NUCLEOSOME-BOUND INO80 ATPASE organism=? DNA sequence DT(K-72):DA(L72) DG(K-71):DC(L71) DG(K-70):DC(L70) DA(K-69):DT(L69) DG(K-68):DC(L68) DA(K-67):DT(L67) DA(K-66):DT(L66) DT(K-65):DA(L65) DC(K-64):DG(L64) DC(K-63):DG(L63) DC(K-62):DG(L62) DG(K-61):DC(L61) DG(K-60):DC(L60) DT(K-59):DA(L59) DG(K-58):DC(L58) DC(K-57):DG(L57) DC(K-56):DG(L56) DG(K-55):DC(L55) DA(K-54):DT(L54) DG(K-53):DC(L53) DG(K-52):DC(L52) DC(K-51):DG(L51) DC(K-50):DG(L50) DG(K-49):DC(L49) DC(K-48):DG(L48) DT(K-47):DA(L47) DC(K-46):DG(L46) DA(K-45):DT(L45) DA(K-44):DT(L44) DT(K-43):DA(L43) DT(K-42):DA(L42) DG(K-41):DC(L41) DG(K-40):DC(L40) DT(K-39):DA(L39) DC(K-38):DG(L38) DG(K-37):DC(L37) DT(K-36):DA(L36) DA(K-35):DT(L35) DG(K-34):DC(L34) DA(K-33):DT(L33) DC(K-32):DG(L32) DA(K-31):DT(L31) DG(K-30):DC(L30) DC(K-29):DG(L29) DT(K-28):DA(L28) DC(K-27):DG(L27) DT(K-26):DA(L26) DA(K-25):DT(L25) DG(K-24):DC(L24) DC(K-23):DG(L23) DA(K-22):DT(L22) DC(K-21):DG(L21) DC(K-20):DG(L20) DG(K-19):DC(L19) DC(K-18):DG(L18) DT(K-17):DA(L17) DT(K-16):DA(L16) DA(K-15):DT(L15) DA(K-14):DT(L14) DA(K-13):DT(L13) DC(K-12):DG(L12) DG(K-11):DC(L11) DC(K-10):DG(L10) DA(K-9):DT(L9) DC(K-8):DG(L8) DG(K-7):DC(L7) DT(K-6):DA(L6) DA(K-5):DT(L5) DC(K-4):DG(L4) DG(K-3):DC(L3) DC(K-2):DG(L2) DG(K-1):DC(L1) DC(K0):DG(L0) DT(K1):DA(L-1) DG(K2):DC(L-2) DT(K3):DA(L-3) DC(K4):DG(L-4) DC(K5):DG(L-5) DC(K6):DG(L-6) DC(K7):DG(L-7) DC(K8):DG(L-8) DG(K9):DC(L-9) DC(K10):DG(L-10) DG(K11):DC(L-11) DT(K12):DA(L-12) DT(K13):DA(L-13) DT(K14):DA(L-14) DT(K15):DA(L-15) DA(K16):DT(L-16) DA(K17):DT(L-17) DC(K18):DG(L-18) DC(K19):DG(L-19) DG(K20):DC(L-20) DC(K21):DG(L-21) DC(K22):DG(L-22) DA(K23):DT(L-23) DA(K24):DT(L-24) DG(K25):DC(L-25) DG(K26):DC(L-26) DG(K27):DC(L-27) DG(K28):DC(L-28) DA(K29):DT(L-29) DT(K30):DA(L-30) DT(K31):DA(L-31) DA(K32):DT(L-32) DC(K33):DG(L-33) DT(K34):DA(L-34) DC(K35):DG(L-35) DC(K36):DG(L-36) DC(K37):DG(L-37) DT(K38):DA(L-38) DA(K39):DT(L-39) DG(K40):DC(L-40) DT(K41):DA(L-41) DC(K42):DG(L-42) DT(K43):DA(L-43) DC(K44):DG(L-44) DC(K45):DG(L-45) DA(K46):DT(L-46) DG(K47):DC(L-47) DG(K48):DC(L-48) DC(K49):DG(L-49) DA(K50):DT(L-50) DC(K51):DG(L-51) DG(K52):DC(L-52) DT(K53):DA(L-53) DG(K54):DC(L-54) DT(K55):DA(L-55) DC(K56):DG(L-56) DA(K57):DT(L-57) DG(K58):DC(L-58) DA(K59):DT(L-59) DT(K60):DA(L-60) DA(K61):DT(L-61) DT(K62):DA(L-62) DA(K63):DT(L-63) DT(K64):DA(L-64) DA(K65):DT(L-65) DC(K66):DG(L-66) DA(K67):DT(L-67) DT(K68):DA(L-68) DC(K69):DG(L-69) DC(K70):DG(L-70) chainQ ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger >8att_AB:DNA/RNA_polymerases;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH 4-MER RNA, PPPGPGPUPA (IC4) organism=? DNA sequence DC(T11):DG(N132) DA(T12):DT(N131) DT(T13):DA(N130) DT(T14):DA(N129) DA(T15):DT(N128) DT(T16):DA(N127) DC(T17):DG(N126) DT(T18):DA(N125) DA(T19):DT(N124) DC(T20):DA(N123) DC(T21):DA(N122) DG(T22):DT(N121) DC(T24):DG(N120) DA(T25):DA(N118) DA(T26):DT(N117) DT(T27):DA(N116) DA(T28):DT(N115) DT(T29):DA(N114) DC(T30):DG(N113) DA(T31):DT(N112) DA(T32):DT(N111) DT(T33):DA(N110) DA(T34):DT(N109) DC(T35):DG(N108) DT(T36):DA(N107) DT(T37):DA(N106) chainB ( 53) TYR54 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASP101 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 0 0 29 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) MET334 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (334) TYR335 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) HIS339 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (204) TYR640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (208) SER644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (209) LYS645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 3 0 0 0 0 0 0 0 0 0 (393) ARG829 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) TYR831 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (583) THR1019 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (586) TYR1022 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (588) VAL1024 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (589) THR1025 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (590) TYR1026 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (591) VAL1027 0 0 0 0 0 0 58 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (596) GLN1032 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (616) LYS1052 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (693) GLN1129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 (702) PHE1138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 prot.sequence alnifnqdrqkvlenrateaarerwkhdfeeakargdisieknlnvklwkwynemlplvkeeinhcrsllseklsdkkglnkvdtnrlgygpyltlidpgkmcvitilellklnstggviegmrtaravisvgkaiemefrseqvlksesqakilwpqsirarigsvlismliqvakvsvqgvdpvtkakvhgeapafahgyqYhngSKlgvlkihktlirqlngerliasvqpqllpmlvepkpwvnwrsggyhytqstllrtkdspeqvaylkaasdngdidrvydglnvlgrtpwtvnrkvfdvvsqvwnkgegfldipgaqdemvlppappknsdpsilrawklqvktiankfssdrsnrcdtnykleiaraflgeklyfphnldfrgRaYplsphfnhlgndmsrgllifwhgkklgpsglkwlkihlsnlfgfdklplkdrvafteshlqdikdsaenpltgdrwwttadkpwqalatcfelnevmkmdnpeefishqpvhqdgtcnglqhyaalggdvegatqvnlvpsdkpqdvyahvarlvqkrleiaaekgdenakilkdkitrkvvkqtvmTnvYgVTYVgatfQiakqlspifddrkesldfsKyltkhvfsairelfhsahliqdwlgesakrisksirldvdeksfkngnkpdfmssviwttplglpivqpyreeskkQvetnlqtvFisdpfavnpvnarrqkaglppnfihsldashmllsaaecgkqgldfasvhdsywthasdidtmnvvlreqfiklhevdlvlrlkeefdqryknyvkigklkrstdlaqkiirirkdlsrklgrsttladeiyfekkrqellnspliedrnvgekmvttvslfeditdldalegmsvllplrlpeippkgdfdvtvlrnsqyffs/svpipgikdisklkffygfkylwnptvynkifdkldltktykhpeelkvldlYpgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrDpYDWstysnlideerifvpevqssdhindkfltvanvtgegsegLimQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmdfvdMYqteHsg >8att_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH 4-MER RNA, PPPGPGPUPA (IC4) organism=? DNA sequence DA(N106):DT(T37) DA(N107):DT(T36) DG(N108):DC(T35) DT(N109):DA(T34) DA(N110):DT(T33) DT(N111):DA(T32) DT(N112):DA(T31) DG(N113):DC(T30) DA(N114):DT(T29) DT(N115):DA(T28) DA(N116):DT(T27) DT(N117):DA(T26) DA(N119):DA(T25) DG(N120):DC(T24) DT(N121):DG(T22) DA(N122):DC(T21) DA(N123):DC(T20) DT(N124):DA(T19) DA(N125):DT(T18) DG(N126):DC(T17) DA(N127):DT(T16) DT(N128):DA(T15) DA(N129):DT(T14) DA(N130):DT(T13) DT(N131):DA(T12) DG(N132):DC(T11) chainB ( 53) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (100) ASP101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 29 0 0 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 (333) MET334 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) TYR335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (338) HIS339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 prot.sequence svpipgikdisklkffygfkylwnptvynkifdkldltktykhpeelkvldlYpgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrDpYDWstysnlideerifvpevqssdhindkfltvanvtgegsEgLiMQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmdfvdMYqteHsg >8atv_AB:DNA/RNA_polymerases;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH 5-MER RNA, PPPGPGPAPAPA (IC5) organism=? DNA sequence DG(N108):DC(T36) DT(N109):DA(T35) DA(N110):DT(T34) DT(N111):DA(T33) DT(N112):DA(T32) DG(N113):DC(T31) DA(N114):DT(T30) DT(N115):DA(T29) DA(N116):DT(T28) DT(N117):DA(T27) DA(N118):DA(T26) DA(N119):DC(T25) DG(N120):DA(T24) DT(N121):DG(T23) DA(N122):DC(T22) DA(N123):DC(T21) DA(N124):DT(T20) DA(N125):DT(T19) DA(N126):DT(T18) DT(N127):DA(T17) DG(N128):DC(T16) DC(N129):DG(T15) DA(N130):DT(T14) DT(N131):DA(T13) DA(N132):DT(T12) DA(N133):DT(T11) DT(N134):DA(T10) chainB ( 53) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASP101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 0 31 0 50 0 0 0 0 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) MET334 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) TYR335 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (137) THR522 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) ARG530 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ARG533 0 0 0 0 0 0 0 0 0 0 0 11 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) TYR640 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) ASN642 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) SER644 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) LYS645 0 0 0 0 0 0 0 0 7 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (362) ARG780 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (409) ARG827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 (413) TYR831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (597) GLN1015 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (601) THR1019 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 (604) TYR1022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (606) VAL1024 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (609) VAL1027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 (614) GLN1032 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (711) GLN1129 0 0 0 0 0 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (720) PHE1138 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (733) ARG1151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 (741) PRO1159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (745) HIS1163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 prot.sequence inffeiynslptleekkafesalnifnqdrqkvlenrateaarerwkhdfeeakargdisieknlnvklwkwynemlplvkeeinhcrsllseklsdkkglnkvdtnrlgygpyltlidpgkmcvitilellklnsTggviegmRtaRavisvgkaiemefrseqvlksekilwpqsirarigsvlismliqvakvsvqgvdpvtkakvhgeapafahgyqYhNgSKlgvlkihktlirqlngerliasvqpqllpmlvepkpwvnwrsggyhytqstllrtkdspeqvaylkaasdngdidrvydglnvlgrtpwtvnrkvfdvvsqvwnkgegfldipgaqdemvlppappknsdpsilRawklqvktiankfssdrsnrcdtnykleiaraflgeklyfphnldfRgraYplsphfnhlgndmsrgllifwhgkklgpsglkwlkihlsnlfgfdklplkdrvafteshlqdikdsaenpltgdrwwttadkpwqalatcfelnevmkmdnpeefishqpvhqdgtcnglqhyaalggdvegatqvnlvpsdkpqdvyahvarlvqkrleiaaekgdenakilkdkitrkvvkQtvmTnvYgVtyVgatfQiakqlspifddrkesldfskyltkhvfsairelfhsahliqdwlgesakrisksirldvdeksfkngnkpdfmssviwttplglpivqpyreeskkQvetnlqtvFisdpfavnpvnaRrqkaglpPnfiHsldashmllsaaecgkqgldfasvhdsywthasdidtmnvvlreqfiklhevdlvlrlkeefdqryknyvkigklkrstdlaqkiirirkdlsrklgrsttladeiyfekkrqellnspliedrnvgekmvttvslfeditdldalgmsvllplrlpeippkgdfdvtvlrnsqyffs/svpipgikdisklkffygfkylwnptvynkifdkldltktykhpeelkvldlYpgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrDpYDWstysnlideerifvpevqssdhindkfltvanvtgegsEgLiMQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmdfvdMY >8atv_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH 5-MER RNA, PPPGPGPAPAPA (IC5) organism=? DNA sequence DA(T10):DT(N134) DT(T11):DA(N133) DT(T12):DA(N132) DA(T13):DT(N131) DT(T14):DA(N130) DG(T15):DC(N129) DC(T16):DG(N128) DA(T17):DT(N127) DT(T18):DA(N126) DT(T19):DA(N125) DT(T20):DA(N124) DC(T21):DA(N123) DC(T22):DA(N122) DG(T23):DT(N121) DA(T24):DG(N120) DC(T25):DA(N119) DA(T26):DA(N118) DA(T27):DT(N117) DT(T28):DA(N116) DA(T29):DT(N115) DT(T30):DA(N114) DC(T31):DG(N113) DA(T32):DT(N112) DA(T33):DT(N111) DT(T34):DA(N110) DA(T35):DT(N109) DC(T36):DG(N108) chainB ( 53) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASP101 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 0 50 0 31 0 0 0 0 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 (333) MET334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (334) TYR335 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence svpipgikdisklkffygfkylwnptvynkifdkldltktykhpeelkvldlYpgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrDpYDWstysnlideerifvpevqssdhindkfltvanvtgegsEgLiMQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmdfvdMY >8atw_A:DNA/RNA_polymerases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH 6-MER RNA, PPPGPGPAPAPAPU (IC6) organism=? DNA sequence DC(T10):DG(N135) DA(T11):DT(N134) DT(T12):DA(N133) DT(T13):DA(N132) DA(T14):DT(N131) DT(T15):DA(N130) DG(T16):DC(N129) DC(T17):DG(N128) DA(T18):DT(N127) DT(T19):DA(N126) DT(T20):DA(N125) DT(T21):DA(N124) DC(T22):DA(N123) DC(T23):DA(N122) DG(T24):DT(N121) DA(T25):DG(N120) DC(T26):DA(N119) DA(T27):DA(N118) DA(T28):DT(N117) DT(T29):DA(N116) DA(T30):DT(N115) DT(T31):DA(N114) DC(T32):DG(N113) DA(T33):DT(N112) DA(T34):DT(N111) DT(T35):DA(N110) DA(T36):DT(N109) DC(T37):DG(N108) chainA (135) ASN520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) THR522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) ARG530 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 (148) ARG533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (220) TYR640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 (222) ASN642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 (224) SER644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 (225) LYS645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 1 0 0 0 0 0 0 0 (244) LEU664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) ARG797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) SER798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) CYS801 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) ARG827 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) TYR831 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (595) GLN1015 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (599) THR1019 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (602) TYR1022 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (604) VAL1024 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (605) THR1025 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (606) TYR1026 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (607) VAL1027 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (612) GLN1032 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (709) GLN1129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 (718) PHE1138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (731) ARG1151 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (739) PRO1159 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (743) HIS1163 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence inffeiynslptleekkafesalnifnqdrqkvlenrateaarerwkhdfeeakargdisieknlnvklwkwynemlplvkeeinhcrsllseklsdkkglnkvdtnrlgygpyltlidpgkmcvitilellklNsTggviegmRtaRavisvgkaiemefrseqvlkkilwpqsirarigsvlismliqvakvsvqgvdpvtkakvhgeapafahgyqYhNgSKlgvlkihktlirqlngerLiasvqpqllpmlvepkpwvnwrsggyhytqstllrtkdspeqvaylkaasdngdidrvydglnvlgrtpwtvnrkvfdvvsqvwnkgegfldipgaqdemvlppappknsdpsilrawklqvktiankfssdRSnrCdtnykleiaraflgeklyfphnldfRgraYplsphfnhlgndmsrgllifwhgkklgpsglkwlkihlsnlfgfdklplkdrvafteshlqdikdsaenpltgdrwwttadkpwqalatcfelnevmkmdnpeefishqpvhqdgtcnglqhyaalggdvegatqvnlvpsdkpqdvyahvarlvqkrleiaaekgdenakilkdkitrkvvkQtvmTnvYgVTYVgatfQiakqlspifddrkesldfskyltkhvfsairelfhsahliqdwlgesakrisksirldvdeksfkngnkpdfmssviwttplglpivqpyreeskkQvetnlqtvFisdpfavnpvnaRrqkaglpPnfiHsldashmllsaaecgkqgldfasvhdsywthasdidtmnvvlreqfiklhevdlvlrlkeefdqryknyvkigklkrstdlaqkiirirkdlsrklgrsttladeiyfekkrqellnspliedrnvgekmvttvslfeditdldalegmsvllplrlpeippkgdfdvtvlrnsqyffs >8atw_AB:DNA/RNA_polymerases;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH 6-MER RNA, PPPGPGPAPAPAPU (IC6) organism=? DNA sequence DG(N108):DC(T37) DT(N109):DA(T36) DA(N110):DT(T35) DT(N111):DA(T34) DT(N112):DA(T33) DG(N113):DC(T32) DA(N114):DT(T31) DT(N115):DA(T30) DA(N116):DT(T29) DT(N117):DA(T28) DA(N118):DA(T27) DA(N119):DC(T26) DG(N120):DA(T25) DT(N121):DG(T24) DA(N122):DC(T23) DA(N123):DC(T22) DA(N124):DT(T21) DA(N125):DT(T20) DA(N126):DT(T19) DT(N127):DA(T18) DG(N128):DC(T17) DC(N129):DG(T16) DA(N130):DT(T15) DT(N131):DA(T14) DA(N132):DT(T13) DA(N133):DT(T12) DT(N134):DA(T11) DG(N135):DC(T10) chainB ( 17) TYR18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 53) TYR54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASP101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 0 30 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) MET334 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (135) ASN520 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) THR522 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) ARG530 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ARG533 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) TYR640 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) ASN642 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) SER644 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) LYS645 0 0 0 0 0 0 0 1 5 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) LEU664 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (377) ARG797 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) SER798 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) CYS801 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) ARG827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (411) TYR831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (595) GLN1015 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (599) THR1019 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (602) TYR1022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 (604) VAL1024 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (605) THR1025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (606) TYR1026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (607) VAL1027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 (612) GLN1032 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (709) GLN1129 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (718) PHE1138 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (731) ARG1151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (739) PRO1159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (743) HIS1163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 prot.sequence inffeiynslptleekkafesalnifnqdrqkvlenrateaarerwkhdfeeakargdisieknlnvklwkwynemlplvkeeinhcrsllseklsdkkglnkvdtnrlgygpyltlidpgkmcvitilellklNsTggviegmRtaRavisvgkaiemefrseqvlkkilwpqsirarigsvlismliqvakvsvqgvdpvtkakvhgeapafahgyqYhNgSKlgvlkihktlirqlngerLiasvqpqllpmlvepkpwvnwrsggyhytqstllrtkdspeqvaylkaasdngdidrvydglnvlgrtpwtvnrkvfdvvsqvwnkgegfldipgaqdemvlppappknsdpsilrawklqvktiankfssdRSnrCdtnykleiaraflgeklyfphnldfRgraYplsphfnhlgndmsrgllifwhgkklgpsglkwlkihlsnlfgfdklplkdrvafteshlqdikdsaenpltgdrwwttadkpwqalatcfelnevmkmdnpeefishqpvhqdgtcnglqhyaalggdvegatqvnlvpsdkpqdvyahvarlvqkrleiaaekgdenakilkdkitrkvvkQtvmTnvYgVTYVgatfQiakqlspifddrkesldfskyltkhvfsairelfhsahliqdwlgesakrisksirldvdeksfkngnkpdfmssviwttplglpivqpyreeskkQvetnlqtvFisdpfavnpvnaRrqkaglpPnfiHsldashmllsaaecgkqgldfasvhdsywthasdidtmnvvlreqfiklhevdlvlrlkeefdqryknyvkigklkrstdlaqkiirirkdlsrklgrsttladeiyfekkrqellnspliedrnvgekmvttvslfeditdldalegmsvllplrlpeippkgdfdvtvlrnsqyffs/svpipgikdisklkffYgfkylwnptvynkifdkldltktykhpeelkvldlYpgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrDpYDWstysnlideerifvpevqssdhindkfltvanvtgegsEgLiMQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmdfvdMyqt >8b0a_C:Histone-fold; title=CRYO-EM STRUCTURE OF ALC1 BOUND TO AN ASYMMETRIC, SITE-SPECIFICALLY PARYLATED NUCLEOSOME organism=? DNA sequence DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) DA(I73):DT(J-73) DG(I74):DC(J-74) DG(I75):DC(J-75) DC(I76):DG(J-76) chainC ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >8b1t_B:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=RECBCD-DNA IN COMPLEX WITH THE PHAGE PROTEIN ABC2 organism=? DNA sequence DT(X69) DT(X68) DA(X67) DG(X66) DA(X65) DT(X64) DT(X63) DA(X62) DC(X61) DG(X60) DC(X59) DT(X58) DC(X57) DG(X56) DT(X55) DG(X54) DA(X53) DC(X52) DG(X51) DA(X50) DT(X30) DC(X29) DG(X28) DT(X27) DC(X26) DA(X25) DC(X24) DG(X23) DA(X22) DG(X21) DC(X20) DG(X19) DT(X18) DA(X17) DA(X16) DT(X15) DC(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X7) DT(X6) DT(X5) DT(X4) DT(X3) DT(X2) DT(X1):DT(X2) chainB (251) ARG255 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) PHE422 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (555) ARG559 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (556) SER560 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (738) HIS742 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (757) ARG761 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) ARG824 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgidrRkfnrsnqakwidkisawaeeetnsyqlpeslekfsqrfledrtkaggetprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyaFRgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvRSrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtiHkskgleyplvwlpfitnfRvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqtphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag >8b1t_BCD:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=RECBCD-DNA IN COMPLEX WITH THE PHAGE PROTEIN ABC2 organism=? DNA sequence DT(X69) DT(X68) DA(X67) DG(X66) DA(X65) DT(X64) DT(X63) DA(X62) DC(X61) DG(X60) DC(X59) DT(X58) DC(X57) DG(X56) DT(X55) DG(X54) DA(X53) DC(X52) DG(X51) DA(X50) DT(X30) DC(X29) DG(X28) DT(X27) DC(X26) DA(X25) DC(X24) DG(X23) DA(X22) DG(X21) DC(X20) DG(X19) DT(X18) DA(X17) DA(X16) DT(X15) DC(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X7) DT(X6) DT(X5) DT(X4) DT(X3) DT(X2) DT(X1):DT(X2) chainB (251) ARG255 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) PHE422 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (555) ARG559 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (556) SER560 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (738) HIS742 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (757) ARG761 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) ARG824 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (817) ARG858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (834) LEU875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 15 0 0 0 0 0 0 0 0 0 (1037) ASN1078 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (1038) MET1079 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1039) MET1080 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 (1040) VAL1081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (1041) ARG1082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 chainD ( 13) LYS14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (236) HIS241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (242) GLN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 (243) PRO248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 6 0 0 0 0 0 (299) VAL304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (534) HIS539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 (554) PRO559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (555) VAL560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgidrRkfnrsnqakwidkisawaeeetnsyqlpeslekfsqrfledrtkaggetprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyaFRgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvRSrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtiHkskgleyplvwlpfitnfRvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqtphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag/mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfRtedseipdtepfilegLsryqinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegNMMVRgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq/klqkqlleavehKqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlenhpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlHrllgaQPgsqrlrhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasVeagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiarndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvHksqgsefdhaalilpsqrtPVvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss >8b1u_BCD:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=RECBCD-DNA IN COMPLEX WITH THE PHAGE PROTEIN ABC2 AND HOST PPIB organism=? DNA sequence DT(X69) DT(X68) DA(X67) DG(X66) DA(X65) DT(X64) DT(X63) DA(X62) DC(X61) DG(X60) DC(X59) DT(X58) DC(X57) DG(X56) DT(X55) DG(X54) DA(X53) DC(X52) DG(X51) DA(X50) DT(X30) DC(X29) DG(X28) DT(X27) DC(X26) DA(X25) DC(X24) DG(X23) DA(X22) DG(X21) DC(X20) DG(X19) DT(X18) DA(X17) DA(X16) DT(X15) DC(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X7) DT(X6) DT(X5) DT(X4) DT(X1) DT(X2) DT(X3):DT(X4) chainB (251) ARG255 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) PHE422 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (555) ARG559 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (556) SER560 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (738) HIS742 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (757) ARG761 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) ARG824 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (817) ARG858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (834) LEU875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 13 0 0 0 0 0 0 0 0 0 (1037) ASN1078 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1038) MET1079 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1039) MET1080 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 (1040) VAL1081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (1041) ARG1082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 chainD ( 13) LYS14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (236) HIS241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (242) GLN247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 (243) PRO248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 6 0 0 0 0 0 (299) VAL304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (534) HIS539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (554) PRO559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (555) VAL560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgidrRkfnrsnqakwidkisawaeeetnsyqlpeslekfsqrfledrtkaggetprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyaFRgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvRSrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtiHkskgleyplvwlpfitnfRvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqqtphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag/mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfRtedseipdtepfilegLsryqinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegNMMVRgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq/klqkqlleavehKqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlenhpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlHrllgaQPgsqrlrhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasVeagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiarndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvHksqgsefdhaalilpsqrtPVvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss >8b1u_C:P-loop_containing_nucleoside_triphosphate_hydrolases;Restriction_endonuclease-like; title=RECBCD-DNA IN COMPLEX WITH THE PHAGE PROTEIN ABC2 AND HOST PPIB organism=? DNA sequence DT(X69) DT(X68) DA(X67) DG(X66) DA(X65) DT(X64) DT(X63) DA(X62) DC(X61) DG(X60) DC(X59) DT(X58) DC(X57) DG(X56) DT(X55) DG(X54) DA(X53) DC(X52) DG(X51) DA(X50) DT(X30) DC(X29) DG(X28) DT(X27) DC(X26) DA(X25) DC(X24) DG(X23) DA(X22) DG(X21) DC(X20) DG(X19) DT(X18) DA(X17) DA(X16) DT(X15) DC(X14) DT(X13) DT(X12) DT(X11) DT(X10) DT(X9) DT(X8) DT(X7) DT(X6) DT(X5) DT(X4) DT(X1) DT(X2) DT(X3):DT(X4) chainC (817) ARG858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (834) LEU875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 13 0 0 0 0 0 0 0 0 0 (1037) ASN1078 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1038) MET1079 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1039) MET1080 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 (1040) VAL1081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (1041) ARG1082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfRtedseipdtepfilegLsryqinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegNMMVRgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq >8b4b_W:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=TOXR BACTERIAL TRANSCRIPTIONAL REGULATOR BOUND TO 19 BP OMPU PROMOTER DNA organism=Vibrio cholerae DNA sequence DC(L-48):DG(M48) DA(L-47):DT(M47) DT(L-46):DA(M46) DA(L-45):DT(M45) DT(L-44):DA(M44) DC(L-43):DG(M43) DA(L-42):DT(M42) DT(L-41):DA(M41) DT(L-40):DA(M40) DT(L-39):DA(M39) DT(L-38):DA(M38) DA(L-37):DT(M37) DC(L-36):DG(M36) DT(L-35):DA(M35) DA(L-34):DT(M34) DA(L-33):DT(M33) DC(L-32):DG(M32) DT(L-31):DA(M31) DG(L-30):DC(M30) chainW ( 70) SER75 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR77 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN78 0 0 0 0 5 10 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) SER81 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkfilaekftfdplsntlidkedseeiirlgsnesrilwllaqrpnevisrndlhdfvwreqgfevddsSlTQaiStlrkmlkdstkspqyvktvpkrgyqliarvetve >8b4b_WXYZ:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=TOXR BACTERIAL TRANSCRIPTIONAL REGULATOR BOUND TO 19 BP OMPU PROMOTER DNA organism=Vibrio cholerae DNA sequence DC(M30):DG(L-30) DA(M31):DT(L-31) DG(M32):DC(L-32) DT(M33):DA(L-33) DT(M34):DA(L-34) DA(M35):DT(L-35) DG(M36):DC(L-36) DT(M37):DA(L-37) DA(M38):DT(L-38) DA(M39):DT(L-39) DA(M40):DT(L-40) DA(M41):DT(L-41) DT(M42):DA(L-42) DG(M43):DC(L-43) DA(M44):DT(L-44) DT(M45):DA(L-45) DA(M46):DT(L-46) DT(M47):DA(L-47) DG(M48):DC(L-48) chainW ( 70) SER75 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 72) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 ( 73) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 9 10 5 0 0 0 0 ( 76) SER81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 chainX ( 66) THR77 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 chainY ( 67) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 ( 68) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 chainZ ( 69) SER74 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 ( 70) SER75 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 72) THR77 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN78 0 0 0 0 0 0 0 5 5 10 2 0 0 0 0 0 0 0 0 ( 76) SER81 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkfilaekftfdplsntlidkedseeiirlgsnesrilwllaqrpnevisrndlhdfvwreqgfevddsSlTQaiStlrkmlkdstkspqyvktvpkrgyqliarvetve/mkfilaekftfdplsntlidkedseeiirlgsnesrilwllaqrpnevisrndlhdfvwrddSslTQaistlrkmlkdstkspqyvktvpkrgyqliarvetve/mkfilaekftfdplsntlidkedseeiirlgsnesrilwllaqrpnevisrndlhdfvwreddsslTQaistlrkmlkdstkspqyvktvpkrgyqliarvetve/mkfilaekftfdplsntlidkedseeiirlgsnesrilwllaqrpnevisrndlhdfvwreqgfevddSSlTQaiStlrkmlkdstkspqyvktvpkrgyqliarvetve >8b4c_D:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=TOXR BACTERIAL TRANSCRIPTIONAL REGULATOR BOUND TO 20 BP TOXT PROMOTER DNA organism=Vibrio cholerae DNA sequence DC(L-97):DG(M97) DT(L-96):DA(M96) DC(L-95):DG(M95) DA(L-94):DT(M94) DA(L-93):DT(M93) DA(L-92):DT(M92) DA(L-91):DT(M91) DA(L-90):DT(M90) DA(L-89):DT(M89) DC(L-88):DG(M88) DA(L-87):DT(M87) DT(L-86):DA(M86) DA(L-85):DT(M85) DA(L-84):DT(M84) DA(L-83):DT(M83) DA(L-82):DT(M82) DT(L-81):DA(M81) DA(L-80):DT(M80) DA(L-79):DT(M79) DC(L-78):DG(M78) chainD ( 69) SER74 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 70) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 72) THR77 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 73) GLN78 0 0 0 0 0 0 0 0 0 0 0 5 5 9 1 0 0 0 0 0 ( 76) SER81 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 prot.sequence mkfilaekftfdplsntlidkedseeiirlgsnesrilwllaqrpnevisrndlhdfvwreqgfevddSSlTQaiStlrkmlkdstkspqyvktvpkrgyqliarvet >8b4d_B:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=TOXR BACTERIAL TRANSCRIPTIONAL REGULATOR BOUND TO 40 BP TOXT PROMOTER DNA organism=Vibrio cholerae DNA sequence DC(L-96):DG(M96) DC(L-95):DG(M95) DA(L-94):DT(M94) DA(L-93):DT(M93) DA(L-92):DT(M92) DA(L-91):DT(M91) DA(L-90):DT(M90) DA(L-89):DT(M89) DC(L-88):DG(M88) DA(L-87):DT(M87) DT(L-86):DA(M86) DA(L-85):DT(M85) DA(L-84):DT(M84) DA(L-83):DT(M83) DA(L-82):DT(M82) DT(L-81):DA(M81) DA(L-80):DT(M80) DA(L-79):DT(M79) DC(L-78):DG(M78) DA(L-77):DT(M77) DT(L-76):DA(M76) DG(L-75):DC(M75) DA(L-74):DT(M74) DG(L-73):DC(M73) DT(L-72):DA(M72) DT(L-71):DA(M71) DA(L-70):DT(M70) DC(L-69):DG(M69) DT(L-68):DA(M68) DT(L-67):DA(M67) DT(L-66):DA(M66) DA(L-65):DT(M65) DT(L-64):DA(M64) DG(L-63):DC(M63) DT(L-62):DA(M62) DT(L-61):DA(M61) DT(L-60):DA(M60) DT(L-59):DA(M59) DT(L-58):DA(M58) DC(L-57):DG(M57) chainB ( 68) SER74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 69) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 71) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 72) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 5 4 0 0 0 0 0 0 0 0 ( 75) SER81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 prot.sequence kfilaekftfdplsntlidkedseeiirlgsnesrilwllaqrpnevisrndlhdfvwreqgfevddSSlTQaiStlrkmlkdstkspqyvktvpkrgyqliarvetv >8b4d_BCD:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=TOXR BACTERIAL TRANSCRIPTIONAL REGULATOR BOUND TO 40 BP TOXT PROMOTER DNA organism=Vibrio cholerae DNA sequence DG(M57):DC(L-57) DA(M58):DT(L-58) DA(M59):DT(L-59) DA(M60):DT(L-60) DA(M61):DT(L-61) DA(M62):DT(L-62) DC(M63):DG(L-63) DA(M64):DT(L-64) DT(M65):DA(L-65) DA(M66):DT(L-66) DA(M67):DT(L-67) DA(M68):DT(L-68) DG(M69):DC(L-69) DT(M70):DA(L-70) DA(M71):DT(L-71) DA(M72):DT(L-72) DC(M73):DG(L-73) DT(M74):DA(L-74) DC(M75):DG(L-75) DA(M76):DT(L-76) DT(M77):DA(L-77) DG(M78):DC(L-78) DT(M79):DA(L-79) DT(M80):DA(L-80) DA(M81):DT(L-81) DT(M82):DA(L-82) DT(M83):DA(L-83) DT(M84):DA(L-84) DT(M85):DA(L-85) DA(M86):DT(L-86) DT(M87):DA(L-87) DG(M88):DC(L-88) DT(M89):DA(L-89) DT(M90):DA(L-90) DT(M91):DA(L-91) DT(M92):DA(L-92) DT(M93):DA(L-93) DT(M94):DA(L-94) DG(M95):DC(L-95) DG(M96):DC(L-96) chainB ( 68) SER74 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER75 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) THR77 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN78 0 0 0 0 0 0 0 0 4 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) SER81 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 69) SER74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) SER81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 69) SER74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 ( 70) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 ( 73) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 7 5 0 0 0 0 0 0 0 0 0 0 ( 76) SER81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence kfilaekftfdplsntlidkedseeiirlgsnesrilwllaqrpnevisrndlhdfvwreqgfevddSSlTQaiStlrkmlkdstkspqyvktvpkrgyqliarvetv/mkfilaekftfdplsntlidkedseeiirlgsnesrilwllaqrpnevisrndlhdfvwreqgfevddSSlTQaiStlrkmlkdstkspqyvktvpkrgyqliarvetv/mkfilaekftfdplsntlidkedseeiirlgsnesrilwllaqrpnevisrndlhdfvwreqgfevddSSlTQaiStlrkmlkdstkspqyvktvpkrgyqliarvetv >8b4e_A:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=TOXR BACTERIAL TRANSCRIPTIONAL REGULATOR BOUND TO 25 BP TOXT PROMOTER DNA organism=Vibrio cholerae DNA sequence DC(M45):DG(L-45) DG(M46):DC(L-46) DT(M47):DA(L-47) DA(M48):DT(L-48) DT(M49):DA(L-49) DT(M50):DA(L-50) DA(M51):DT(L-51) DC(M52):DG(L-52) DA(M53):DT(L-53) DT(M54):DA(L-54) DA(M55):DT(L-55) DA(M56):DT(L-56) DG(M57):DC(L-57) DA(M58):DT(L-58) DA(M59):DT(L-59) DA(M60):DT(L-60) DA(M61):DT(L-61) DA(M62):DT(L-62) DC(M63):DG(L-63) DA(M64):DT(L-64) DT(M65):DA(L-65) DA(M66):DT(L-66) DA(M67):DT(L-67) DA(M68):DT(L-68) DG(M69):DC(L-69) chainA ( 68) SER74 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER75 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) THR77 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN78 0 0 0 0 8 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) SER81 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kfilaekftfdplsntlidkedseeiirlgsnesrilwllaqrpnevisrndlhdfvwreqgfevddSSlTQaiStlrkmlkdstkspqyvktvpkrgyqliarvet >8b4e_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=TOXR BACTERIAL TRANSCRIPTIONAL REGULATOR BOUND TO 25 BP TOXT PROMOTER DNA organism=Vibrio cholerae DNA sequence DC(M45):DG(L-45) DG(M46):DC(L-46) DT(M47):DA(L-47) DA(M48):DT(L-48) DT(M49):DA(L-49) DT(M50):DA(L-50) DA(M51):DT(L-51) DC(M52):DG(L-52) DA(M53):DT(L-53) DT(M54):DA(L-54) DA(M55):DT(L-55) DA(M56):DT(L-56) DG(M57):DC(L-57) DA(M58):DT(L-58) DA(M59):DT(L-59) DA(M60):DT(L-60) DA(M61):DT(L-61) DA(M62):DT(L-62) DC(M63):DG(L-63) DA(M64):DT(L-64) DT(M65):DA(L-65) DA(M66):DT(L-66) DA(M67):DT(L-67) DA(M68):DT(L-68) DG(M69):DC(L-69) chainA ( 68) SER74 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) SER75 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) THR77 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLN78 0 0 0 0 8 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) SER81 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 68) SER74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 ( 69) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 71) THR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 72) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 6 0 0 ( 75) SER81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 prot.sequence kfilaekftfdplsntlidkedseeiirlgsnesrilwllaqrpnevisrndlhdfvwreqgfevddSSlTQaiStlrkmlkdstkspqyvktvpkrgyqliarvet/kfilaekftfdplsntlidkedseeiirlgsnesrilwllaqrpnevisrndlhdfvwreqgfevddSSlTQaiStlrkmlkdstkspqyvktvpkrgyqliarvetv >8b4h_A:Ribonuclease_H-like;Homeodomain-like; title=ISTA TRANSPOSASE CLEAVED DONOR COMPLEX organism=? DNA sequence DT(E6):DA(F55) DG(E7):DC(F54) DT(E8):DA(F53) DC(E9):DG(F52) DA(E10):DT(F51) DA(E11):DT(F50) DG(E12):DC(F49) DG(E13):DC(F48) DC(E14):DG(F47) DC(E15):DG(F46) DG(E16):DC(F45) DA(E17):DT(F44) DT(E18):DA(F43) DT(E19):DA(F42) DA(E20):DT(F41) DT(E21):DA(F40) DT(E22):DA(F39) DT(E23):DA(F38) DT(E24):DA(F37) DT(E25):DA(F36) DT(E26):DA(F35) DC(E27):DG(F34) DC(E28):DG(F33) DC(E29):DG(F32) DC(E30):DG(F31) DA(E31):DT(F30) DA(E32):DT(F29) DA(E33):DT(F28) DA(E34):DT(F27) DT(E35):DA(F26) DC(E36):DG(F25) DG(E37):DC(F24) DC(E38):DG(F23) DC(E39):DG(F22) DG(E40):DC(F21) DG(E41):DC(F20) DT(E42):DA(F19) DT(E43):DA(F18) DT(E44):DA(F17) DA(E45):DT(F16) DA(E46):DT(F15) DA(E47):DT(F14) DA(E48):DT(F13) DT(E49):DA(F12) DT(E50):DA(F11) DC(E51):DG(F10) DC(E52):DG(F9) DC(E53):DG(F8) DC(E54):DG(F7) DA(E55):DT(F6) DG(E56):DC(F5) DA(E57):DT(F4) DA(E58):DT(F3) DG(E59):DC(F2) DG(E60):DC(F1) chainA (110) THR110 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) ARG112 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) TYR113 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) THR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) GLN120 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) GLN227 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) THR228 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) GLU233 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) ARG234 0 0 2 21 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) GLN237 0 0 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (273) ALA273 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mitrgeffmikemyergmsisdiarelgidrktvrkyihspnppskskrkqrkskldpfkpylqkrmledgvfnseklffeirqqgytggktilkdymkpfretakkkyTvRYeTlpgeQmqvdwkevgevviegkkvklslfvatlgysrmkyavfttsqdqehlmecliqsfkyfggvpkkvlfdnmktvtdgreqgvvkwnqrfsefasyygfipkvcrpyraQTkgkvERaiQyimdhfyvgtafesieelnfllhrwldqvanrkpnAttgispqerwaeeslkplplkdydtsylsyrkvhwdgsfsykgeqwllsaeyagkeilvkerlngdirlyfrgeeishvdqqkkv >8b4h_ABC:Ribonuclease_H-like;Homeodomain-like; title=ISTA TRANSPOSASE CLEAVED DONOR COMPLEX organism=? DNA sequence DT(E6):DA(F55) DG(E7):DC(F54) DT(E8):DA(F53) DC(E9):DG(F52) DA(E10):DT(F51) DA(E11):DT(F50) DG(E12):DC(F49) DG(E13):DC(F48) DC(E14):DG(F47) DC(E15):DG(F46) DG(E16):DC(F45) DA(E17):DT(F44) DT(E18):DA(F43) DT(E19):DA(F42) DA(E20):DT(F41) DT(E21):DA(F40) DT(E22):DA(F39) DT(E23):DA(F38) DT(E24):DA(F37) DT(E25):DA(F36) DT(E26):DA(F35) DC(E27):DG(F34) DC(E28):DG(F33) DC(E29):DG(F32) DC(E30):DG(F31) DA(E31):DT(F30) DA(E32):DT(F29) DA(E33):DT(F28) DA(E34):DT(F27) DT(E35):DA(F26) DC(E36):DG(F25) DG(E37):DC(F24) DC(E38):DG(F23) DC(E39):DG(F22) DG(E40):DC(F21) DG(E41):DC(F20) DT(E42):DA(F19) DT(E43):DA(F18) DT(E44):DA(F17) DA(E45):DT(F16) DA(E46):DT(F15) DA(E47):DT(F14) DA(E48):DT(F13) DT(E49):DA(F12) DT(E50):DA(F11) DC(E51):DG(F10) DC(E52):DG(F9) DC(E53):DG(F8) DC(E54):DG(F7) DA(E55):DT(F6) DG(E56):DC(F5) DA(E57):DT(F4) DA(E58):DT(F3) DG(E59):DC(F2) DG(E60):DC(F1) chainA (110) THR110 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) ARG112 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) TYR113 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) THR115 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (120) GLN120 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) GLN227 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (228) THR228 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) GLU233 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) ARG234 0 0 2 21 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) GLN237 0 0 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (273) ALA273 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 21) SER21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASP30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LYS32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) THR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) THR92 0 0 0 0 0 0 0 0 4 14 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ILE93 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) LYS95 0 0 0 0 0 0 5 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ASP30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 ( 31) ARG31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 ( 32) LYS32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 11 10 0 0 0 0 0 0 0 ( 33) THR33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 35) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 49) ARG49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) THR92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) LYS95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) HIS307 0 0 3 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) ASP309 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) SER313 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) GLN369 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mitrgeffmikemyergmsisdiarelgidrktvrkyihspnppskskrkqrkskldpfkpylqkrmledgvfnseklffeirqqgytggktilkdymkpfretakkkyTvRYeTlpgeQmqvdwkevgevviegkkvklslfvatlgysrmkyavfttsqdqehlmecliqsfkyfggvpkkvlfdnmktvtdgreqgvvkwnqrfsefasyygfipkvcrpyraQTkgkvERaiQyimdhfyvgtafesieelnfllhrwldqvanrkpnAttgispqerwaeeslkplplkdydtsylsyrkvhwdgsfsykgeqwllsaeyagkeilvkerlngdirlyfrgeeishvdqqkkv/mitrgeffmikemyergmsiSdiarelgiDRKTvRkyihspnppskskrkqRkskldpfkpylqkrmledgvfnseklffeirqqgytggkTIlKdymkpfretakkkytvryetlpgeqmqvdwkevgevviegkkvklslfvatlgysrmkyavfttsqdqehlmecliqsfkyfggvpkkvlfdnmktvtdgreqgvvkwnqrfsefasyygfipkvcrpyraqtkgkveraiqyimdhfyvgtafesieelnfllhrwldqvanrkpnattgispqerwaeeslkplplkdydtsylsyrkvhwdgsfsykgeqwllsaeyagkeilvkerlngdirlyfrgeeishvdqqkkv/mitrgeffmikemyergmsisdiarelgiDRKTvRkyihspnppskskRkqRkskldpfkpylqkrmledgvfnseklffeirqqgytggkTilKdymkpfretakkkytvryetlpgeqmqvdwkevgevviegkkvklslfvatlgysrmkyavfttsqdqehlmecliqsfkyfggvpkkvlfdnmktvtdgreqgvvkwnqrfsefasyygfipkvcrraiqyimdhfyvgtafesieelnfllhrwldqvanrkpnattgispqerwaeeslkplplkdydtsylsyrkvHwDgsfSykgeqwllsaeyagkeilvkerlngdirlyfrgeeishvdqqkkvisfaekikkkQtema >8b67_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE CRYSTAL STRUCTURE OF M644G VARIANT OF DNA POL EPSILON CONTAINING CTP IN THE POLYMERASE ACTIVE SITE organism=Saccharomyces cerevisiae DNA sequence DA(T7):DT(P10) DA(T8):DT(P9) DC(T9):DG(P8) DG(T10):DC(P7) DC(T11):DG(P6) DG(T12):DC(P5) DG(T13):DC(P4) DT(T14):DA(P3) DT(T15):DA(P2) DA(T16):DT(P1) chainA (867) LYS967 5 7 0 0 0 0 0 0 0 0 (888) ARG988 0 0 7 9 0 0 0 0 0 0 prot.sequence nyalsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqenqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnqrniynvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafdiettkpplkfpdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwvkrdsylpqgsqglkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgtgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasgypnimttnrlqpdsikaerdctcarklkwawrgeffpskmdeynmikralqnetfpnvltfdelsyadqvihikkrlteysrkvyhrvkvseivereaivcqrenpfyvdtvksfrdrryefkglaktmivlydslqlahkvilnsfygyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKryavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenrsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrkia >8b6k_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE CRYSTAL STRUCTURE OF M644G VARIANT OF DNA POL EPSILON CONTAINING DCTP IN THE POLYMERASE ACTIVE SITE organism=Saccharomyces cerevisiae DNA sequence DT(P1):DA(T16) DA(P2):DT(T15) DA(P3):DT(T14) DC(P4):DG(T13) DC(P5):DG(T12) DG(P6):DC(T11) DC(P7):DG(T10) DG(P8):DC(T9) DT(P9):DA(T8) DT(P10):DA(T7) chainA (890) LYS967 0 0 0 0 0 0 0 0 5 5 (911) ARG988 0 0 0 0 0 0 9 8 0 0 prot.sequence yalsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqeqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnannnvqrniynkvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafaiattkpplkfpdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwvkrdsylpqgsqglkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgtgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasgypnimttnrlqpdsiktcarklkwawrgeffpskmdeynmikralqnetfpnknkvltfdelsyadqvihikkrlteysrkvyhrvkvseivereaivcqrenpfyvdtvksfrdrryefkglaktwkgnlskidpsdkhardeakkmivlydslqlahkvilnsfygyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKryavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenrsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrkia >8b76_B:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE CRYSTAL STRUCTURE OF M644G VARIANT OF DNA POL EPSILON CONTAINING DTTP IN THE POLYMERASE ACTIVE SITE organism=Saccharomyces cerevisiae DNA sequence DA(D5):TTP(B1304) DG(D6):DOC(C11) DA(D7):DT(C10) DA(D8):DT(C9) DC(D9):DG(C8) DG(D10):DC(C7) DC(D11):DG(C6) DG(D12):DC(C5) DG(D13):DC(C4) DT(D14):DA(C3) DT(D15):DA(C2) DA(D16):DT(C1) chainB (376) TYR431 8 0 0 0 0 0 0 0 0 0 0 0 (457) THR512 4 0 0 0 0 0 0 0 0 0 0 0 (585) ASP640 8 0 0 0 0 0 0 0 0 0 0 0 (587) ALA642 1 0 0 0 0 0 0 0 0 0 0 0 (588) SER643 3 0 0 0 0 0 0 0 0 0 0 0 (591) PRO646 1 0 0 0 0 0 0 0 0 0 0 0 (716) ARG781 9 0 0 0 0 0 0 0 0 0 0 0 (720) LYS785 4 0 0 0 0 0 0 0 0 0 0 0 (759) LYS824 15 0 0 0 0 0 0 0 0 0 0 0 (760) VAL825 1 0 0 0 0 0 0 0 0 0 0 0 (763) ASN828 21 0 0 0 0 0 0 0 0 0 0 0 (764) SER829 12 0 0 0 0 0 0 0 0 0 0 0 (766) TYR831 3 2 0 0 0 0 0 0 0 0 0 0 (812) ASP877 6 0 0 0 0 0 0 0 0 0 0 0 (902) LYS967 0 0 6 6 0 0 0 0 0 0 0 0 (923) ARG988 0 0 0 0 7 9 0 0 0 0 0 0 prot.sequence nnyalsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqenqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnannnvqrniynvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafdiettkpplkfpdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwvkrdsylpqgsqglkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgTgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasgypnimttnrlqpdsikaerdctcarklkwawrgeffpskmdeynmikralqnetfpnknkfskkkvltfdelsyadqvihikkrlteysrkvyhrvkvseivereaivcqrenpfyvdtvksfrdrryefkglaktwkgnlskidpsdkhardeakkmivlydslqlahkVilNSfYgyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKryavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenrsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrkiat >8b77_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE CRYSTAL STRUCTURE OF N828V VARIANT OF DNA POL EPSILON CONTAINING DATP IN THE POLYMERASE ACTIVE SITE organism=Saccharomyces cerevisiae DNA sequence DT(P1):DA(T16) DA(P2):DT(T15) DA(P3):DT(T14) DC(P4):DG(T13) DC(P5):DG(T12) DG(P6):DC(T11) DC(P7):DG(T10) DG(P8):DC(T9) DT(P9):DA(T8) DT(P10):DA(T7) chainA (891) LYS967 0 0 0 0 0 0 0 0 5 5 (892) ARG968 0 0 0 0 0 0 2 0 0 0 (912) ARG988 0 0 0 0 0 0 10 7 0 0 prot.sequence alsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqeqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnannnvqrniynvkvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafaiattkpplkfpdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwvkrdsylpqgsqglkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgtgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasmypnimttnrlqpdsikaerdcascdfktcarklkwawrgeffpskmdeynmikralqnetfplsyadqvihikkrlteysrkvyhrvkvseivereaivcqrenpfyvdtvksfrdrryefkglaktwkgnlskidpsdkhardeakkmivlydslqlahkvilvsfygyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKRyavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenrsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrkiat >8b79_B:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE CRYSTAL STRUCTURE OF M644G VARIANT OF DNA POL EPSILON CONTAINING UTP IN THE POLYMERASE ACTIVE SITE organism=Saccharomyces cerevisiae DNA sequence DT(C1):DA(D16) DA(C2):DT(D15) DA(C3):DT(D14) DC(C4):DG(D13) DC(C5):DG(D12) DG(C6):DC(D11) DC(C7):DG(D10) DG(C8):DC(D9) DT(C9):DA(D8) DT(C10):DA(D7) chainB (900) LYS967 0 0 0 0 0 0 0 0 4 5 (921) ARG988 0 0 0 0 0 0 7 9 1 0 prot.sequence nyalsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnannnvqrniynvvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafdiettkpplkfpdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwvkrdsylpqgsqglkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgtgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasgypnimttnrlqpdsikaerdctcarklkwawrgeffpskmdeynmikralqnetfpnknkfskkkvltfdelsyadqvihikkrlteysrkvyhrvkvseivereaivcqrenpfyvdtvksfrdrryefkglaktwkgnlskidpsdkhardeakkmivlydslqlahkvilnsfygyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKryavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenrsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrkiat >8b7e_B:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE CRYSTAL STRUCTURE OF N828V VARIANT OF DNA POL EPSILON CONTAINING UTP IN THE POLYMERASE ACTIVE SITE organism=Saccharomyces cerevisiae DNA sequence DT(C1):DA(D16) DA(C2):DT(D15) DA(C3):DT(D14) DC(C4):DG(D13) DC(C5):DG(D12) DG(C6):DC(D11) DC(C7):DG(D10) DG(C8):DC(D9) DT(C9):DA(D8) DT(C10):DA(D7) chainB (680) ARG744 0 1 1 0 0 0 0 0 0 0 (903) LYS967 0 0 0 0 0 0 0 0 6 5 (924) ARG988 0 0 0 0 0 0 8 7 0 0 prot.sequence nnyalsaqqllnaskiddidsmmgferyvppqyngrfdakdidqipgrvgwltnmhatlvsqenqgisgvdfyfldeeggsfkstvvydpyffiacndesrvndveelvkkylesclkslqiirkedltmdnhllglqktliklsfvnsnqlfearkllrpilqdnannnvqrniynvvdakhliedireydvpyhvrvsidkdirvgkwykvtqqgfiedtrkiafadpvvmafaiattkpplkfpdsavdqimmisymidgegflitnreiisediedfeytpkpeypgfftifnendevallqrffehirdvrptvistfngdffdwpfihnrskihgldmfdeigfapdaegeykssycshmdcfrwvkrdsylpqgsqglkavtqsklgynpieldpelmtpyafekpqhlseysvsdavatyylymkyvhpfifslctiiplnpdetlrkgtgtlcemllmvqayqhnillpnkhtdpierfydghllesetyvgghvesleagvfrsdlknefkidpsaidellqelpealkfsvevenkssvdkvtnfeeiknqitqkllelkennirnelpliyhvdvasmypnimttnrlqpdsikaerdctcarklkwawrgeffpskmdeynmikralqnetfpnknkfskkkvltfdelsyadqvihikkrlteysRkvyhrvkvseivereaivcqrenpfyvdtvksfrdrryefkglaktwkgnlskidpsdkhardeakkmivlydslqlahkvilvsfygyvmrkgsrwysmemagitcltgatiiqmaralvervgrpleldtdgiwcilpksfpetyfftlengkklylsypcsmlnyrvhqkftnhqyqelkdplnyiyethsentiffevdgpykamilpsskeegkgikKryavfnedgslaelkgfelkRrgelqliknfqsdifkvflegdtlegcysavasvcnrwldvldshglmlededlvslicenrsmsktlkeyegqkstsittarrlgdflgedmvkdkglqckyiisskpfnapvteraipvaifsadipikrsflrrwtldpsledldirtiidwgyyrerlgsaiqkiitipaalqgvsnpvprvehpdwlkrkiat >8b9a_3467XY: title=S. CEREVISIAE REPLISOME + CTF4, BOUND BY POL ALPHA PRIMASE. COMPLEX ENGAGED WITH A FORK DNA SUBSTRATE CONTAINING A 60 NUCLEOTIDE LAGGING STRAND. organism=? DNA sequence DA(R16):DT(Q46) DC(R17):DG(Q45) DA(R18):DT(Q44) DC(R19):DG(Q43) DA(R20):DT(Q42) DC(R21):DG(Q41) DT(R22):DA(Q40) DC(R23):DG(Q39) DT(R24):DA(Q38) DC(R25):DG(Q37) DC(R26):DG(Q36) DA(R27):DT(Q35) DA(R28):DT(Q34) DT(R29):DA(Q33) DT(R30):DA(Q32) DC(R31):DG(Q31) DT(R32):DA(Q30) DC(R33):DG(Q29) DT(R34):DA(Q28) DA(R35):DT(Q27) DA(R36):DT(Q26) chain3 chain4 chain6 chain7 (290) PHE363 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) LEU366 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainX chainY ( 2) ARG48 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 prot.sequence davfgdrvrrfqefldtftsyrdsvrsiqvynsnnaannilphriiislddlrefdrsfwsgilvepayfippaekaltdladsmddvphpnasavssrhpwklsfkgsfgahalsprtltaqhlnklvsvegivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnkltteygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfkslgaggmnqsnsntligfktlilgntvyplhaarqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattgrgssgvgltaavttrrleagamvladrgvvcidefdkmtdvdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrthrylppgylegepvpklvtipflrkyvqyakervipqltqeainvivknytdlrnddntkkspitartletlirlatahakvrlsktvnkvdakvaanllrfallged/seplriiwgtnvsiqecttnfrnflmsfkykfrkildereefinnttdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransrqrvlkslyktyvdvvhvkkvitdqdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktftkggryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledkpehisqddvlpvefltmyisyakehihpiiteaaktelvrayvgmrkmtattrqlesmirlaeahakmklknvveledvqeavrlirsaikdyatdpktgkidmnlv/fksralnhvkkvddvtgekvreafeqfledfsvqstdtgevekvyraqiefmkiydlntiyidyqhlsmrengalamaiseqyyrflpflqkglrrvvrkyapellntspeqtervfqisffnlptvhrirdirsekigsllsisgtvtrtsevrpelykasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsrfldwqkvriqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpdvtqlglpgvkpsnsgvtglrslgvrdltykisflachvisigdqevflnslssdeinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsgkassaagltaavvieagalmladngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkrdeaieppfsaeqlrryikyartfkpiltkearsylvekykelrkddasyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsi/lpsiqlpvdynnlfneitdflvtfkqgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcraidnnmplptkeidykddvldvilnqrrlrnermlselfppnltrryflyfkplsqncaaisskplsvrqikgdflgqlitvrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflpapytgFkaLkaglltetyleaqfvrqhkkkfasfsltsdveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrvgdgmkirgdinvclmgdpgvaksqllkaickisprgvyttgkgssgvgltaavmkdpvtdemileggalvladngiccidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskremdskfsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyq/adfsltvlrariallataiggpdytsqidpppyklgddclaclkdlkrwfklvddqqkrwdvamavaeyriltddllpilidwenkcslaaklankayydkialnclqllvlmtwplivteqsssnqitlygelkkhqlvykktilsmesgkvlraairlaldvikidrlsrtprdnmvlklvlnffrnviaiepgeftintkksmdtlppnvsmddislntvissfhknkvfgflltltsslskefdqdfiniplleimfyftkdvnqellfprtsagfelskllqkeHqmRknvikhtsarhsrfggllsiqtpdktrltvsgsqalvdekialqklddskkwnkriikaaeglpnsllnsqtgkaifftesngkhfkefinnfidsgfnillhsvtnyftteqdrmvtleqveyllffawfvkyqllrskidnsadikqvsealkevtfilvssllrsaydlknwtvthagmiafnellnlvsrtkaatdiefivsrlfsderiqllsnlpkigskyslqfmkscielthsvlkvleqysnfqkvqanymtepvietyinflerfreleddsikkvfsffhrvfvqakeqallfrfdliillremlspdgldrmsrsrkyvsqfsdyflarlkkrlkkspawfvgllfpplhnsevgfyqry/kRrpqvkltaekllsdkglpyvlknahkririsskknsydnlsniiqfyqlwahelfpkakfkdfmkicqtvgktdpvlreyrvslfrdemg >8b9b_3467XY: title=S. CEREVISIAE REPLISOME + CTF4, BOUND BY POL ALPHA. COMPLEX ENGAGED WITH A FORK DNA SUBSTRATE CONTAINING A 60 NUCLEOTIDE LAGGING STRAND. organism=? DNA sequence DA(R16):DT(Q46) DC(R17):DG(Q45) DA(R18):DT(Q44) DC(R19):DG(Q43) DA(R20):DT(Q42) DC(R21):DG(Q41) DT(R22):DA(Q40) DC(R23):DG(Q39) DT(R24):DA(Q38) DC(R25):DG(Q37) DC(R26):DG(Q36) DA(R27):DT(Q35) DA(R28):DT(Q34) DT(R29):DA(Q33) DT(R30):DA(Q32) DC(R31):DG(Q31) DT(R32):DA(Q30) DC(R33):DG(Q29) DT(R34):DA(Q28) DA(R35):DT(Q27) DA(R36):DT(Q26) chain3 chain4 chain6 chain7 (290) PHE363 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) LEU366 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainX chainY ( 2) ARG48 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 prot.sequence davfgdrvrrfqefldtftsyrdsvrsiqvynsnnaannilphriiislddlrefdrsfwsgilvepayfippaekaltdladsmddvphpnasavssrhpwklsfkgsfgahalsprtltaqhlnklvsvegivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnkltteygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfkslgaggmnqsnsntligfktlilgntvyplhaarqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattgrgssgvgltaavttrrleagamvladrgvvcidefdkmtdvdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrthrylppgylegepvpklvtipflrkyvqyakervipqltqeainvivknytdlrnddntkkspitartletlirlatahakvrlsktvnkvdakvaanllrfallged/seplriiwgtnvsiqecttnfrnflmsfkykfrkildereefinnttdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransrqrvlkslyktyvdvvhvkkvitdqdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktftkggryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledkpehisqddvlpvefltmyisyakehihpiiteaaktelvrayvgmrkmtattrqlesmirlaeahakmklknvveledvqeavrlirsaikdyatdpktgkidmnlv/fksralnhvkkvddvtgekvreafeqfledfsvqstdtgevekvyraqiefmkiydlntiyidyqhlsmrengalamaiseqyyrflpflqkglrrvvrkyapellntspeqtervfqisffnlptvhrirdirsekigsllsisgtvtrtsevrpelykasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsrfldwqkvriqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpdvtqlglpgvkpsnsgvtglrslgvrdltykisflachvisigdqevflnslssdeinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsgkassaagltaavvieagalmladngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkrdeaieppfsaeqlrryikyartfkpiltkearsylvekykelrkddasyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsi/lpsiqlpvdynnlfneitdflvtfkqgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcraidnnmplptkeidykddvldvilnqrrlrnermlselfppnltrryflyfkplsqncaaisskplsvrqikgdflgqlitvrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflpapytgFkaLkaglltetyleaqfvrqhkkkfasfsltsdveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrvgdgmkirgdinvclmgdpgvaksqllkaickisprgvyttgkgssgvgltaavmkdpvtdemileggalvladngiccidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskremdskfsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyq/adfsltvlrariallataiggpdytsqidpppyklgddclaclkdlkrwfklvddqqkrwdvamavaeyriltddllpilidwenkcslaaklankayydkialnclqllvlmtwplivteqsssnqitlygelkkhqlvykktilsmesgkvlraairlaldvikidrlsrtprdnmvlklvlnffrnviaiepgeftintkksmdtlppnvsmddislntvissfhknkvfgflltltsslskefdqdfiniplleimfyftkdvnqellfprtsagfelskllqkeHqmRknvikhtsarhsrfggllsiqtpdktrltvsgsqalvdekialqklddskkwnkriikaaeglpnsllnsqtgkaifftesngkhfkefinnfidsgfnillhsvtnyftteqdrmvtleqveyllffawfvkyqllrskidnsadikqvsealkevtfilvssllrsaydlknwtvthagmiafnellnlvsrtkaatdiefivsrlfsderiqllsnlpkigskyslqfmkscielthsvlkvleqysnfqkvqanymtepvietyinflerfreleddsikkvfsffhrvfvqakeqallfrfdliillremlspdgldrmsrsrkyvsqfsdyflarlkkrlkkspawfvgllfpplhnsevgfyqry/kRrpqvkltaekllsdkglpyvlknahkririsskknsydnlsniiqfyqlwahelfpkakfkdfmkicqtvgktdpvlreyrvslfrdemg >8b9c_3467XY: title=S. CEREVISIAE POL ALPHA - REPLISOME COMPLEX organism=? DNA sequence DA(R16):DT(Q46) DC(R17):DG(Q45) DA(R18):DT(Q44) DC(R19):DG(Q43) DA(R20):DT(Q42) DC(R21):DG(Q41) DT(R22):DA(Q40) DC(R23):DG(Q39) DT(R24):DA(Q38) DC(R25):DG(Q37) DC(R26):DG(Q36) DA(R27):DT(Q35) DA(R28):DT(Q34) DT(R29):DA(Q33) DT(R30):DA(Q32) DC(R31):DG(Q31) DT(R32):DA(Q30) DC(R33):DG(Q29) DT(R34):DA(Q28) DA(R35):DT(Q27) DA(R36):DT(Q26) chain3 chain4 chain6 chain7 (290) PHE363 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) LEU366 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainX chainY ( 2) ARG48 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 prot.sequence davfgdrvrrfqefldtftsyrdsvrsiqvynsnnaannilphriiislddlrefdrsfwsgilvepayfippaekaltdladsmddvphpnasavssrhpwklsfkgsfgahalsprtltaqhlnklvsvegivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnkltteygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfkslgaggmnqsnsntligfktlilgntvyplhaarqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattgrgssgvgltaavttrrleagamvladrgvvcidefdkmtdvdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrthrylppgylegepvpklvtipflrkyvqyakervipqltqeainvivknytdlrnddntkkspitartletlirlatahakvrlsktvnkvdakvaanllrfallged/seplriiwgtnvsiqecttnfrnflmsfkykfrkildereefinnttdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransrqrvlkslyktyvdvvhvkkvitdqdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktftkggryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledkpehisqddvlpvefltmyisyakehihpiiteaaktelvrayvgmrkmtattrqlesmirlaeahakmklknvveledvqeavrlirsaikdyatdpktgkidmnlv/fksralnhvkkvddvtgekvreafeqfledfsvqstdtgevekvyraqiefmkiydlntiyidyqhlsmrengalamaiseqyyrflpflqkglrrvvrkyapellntspeqtervfqisffnlptvhrirdirsekigsllsisgtvtrtsevrpelykasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsrfldwqkvriqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpdvtqlglpgvkpsnsgvtglrslgvrdltykisflachvisigdqevflnslssdeinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsgkassaagltaavvieagalmladngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkrdeaieppfsaeqlrryikyartfkpiltkearsylvekykelrkddasyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsi/lpsiqlpvdynnlfneitdflvtfkqgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcraidnnmplptkeidykddvldvilnqrrlrnermlselfppnltrryflyfkplsqncaaisskplsvrqikgdflgqlitvrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflpapytgFkaLkaglltetyleaqfvrqhkkkfasfsltsdveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrvgdgmkirgdinvclmgdpgvaksqllkaickisprgvyttgkgssgvgltaavmkdpvtdemileggalvladngiccidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskremdskfsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyq/adfsltvlrariallataiggpdytsqidpppyklgddclaclkdlkrwfklvddqqkrwdvamavaeyriltddllpilidwenkcslaaklankayydkialnclqllvlmtwplivteqsssnqitlygelkkhqlvykktilsmesgkvlraairlaldvikidrlsrtprdnmvlklvlnffrnviaiepgeftintkksmdtlppnvsmddislntvissfhknkvfgflltltsslskefdqdfiniplleimfyftkdvnqellfprtsagfelskllqkeHqmRknvikhtsarhsrfggllsiqtpdktrltvsgsqalvdekialqklddskkwnkriikaaeglpnsllnsqtgkaifftesngkhfkefinnfidsgfnillhsvtnyftteqdrmvtleqveyllffawfvkyqllrskidnsadikqvsealkevtfilvssllrsaydlknwtvthagmiafnellnlvsrtkaatdiefivsrlfsderiqllsnlpkigskyslqfmkscielthsvlkvleqysnfqkvqanymtepvietyinflerfreleddsikkvfsffhrvfvqakeqallfrfdliillremlspdgldrmsrsrkyvsqfsdyflarlkkrlkkspawfvgllfpplhnsevgfyqry/kRrpqvkltaekllsdkglpyvlknahkririsskknsydnlsniiqfyqlwahelfpkakfkdfmkicqtvgktdpvlreyrvslfrdemg >8b9c_Y: title=S. CEREVISIAE POL ALPHA - REPLISOME COMPLEX organism=? DNA sequence DT(Q26):DA(R36) DT(Q27):DA(R35) DA(Q28):DT(R34) DG(Q29):DC(R33) DA(Q30):DT(R32) DG(Q31):DC(R31) DA(Q32):DT(R30) DA(Q33):DT(R29) DT(Q34):DA(R28) DT(Q35):DA(R27) DG(Q36):DC(R26) DG(Q37):DC(R25) DA(Q38):DT(R24) DG(Q39):DC(R23) DA(Q40):DT(R22) DG(Q41):DC(R21) DT(Q42):DA(R20) DG(Q43):DC(R19) DT(Q44):DA(R18) DG(Q45):DC(R17) DT(Q46):DA(R16) chainY ( 2) ARG48 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 prot.sequence kRrpqvkltaekllsdkglpyvlknahkririsskknsydnlsniiqfyqlwahelfpkakfkdfmkicqtvgktdpvlreyrvslfrdemg >8b9d_467KL: title=HUMAN REPLISOME BOUND BY POL ALPHA organism=? DNA sequence DA(N16):DT(M46) DC(N17):DG(M45) DA(N18):DT(M44) DC(N19):DG(M43) DA(N20):DT(M42) DC(N21):DG(M41) DT(N22):DA(M40) DC(N23):DG(M39) DT(N24):DA(M38) DC(N25):DG(M37) DC(N26):DG(M36) DA(N27):DT(M35) DA(N28):DT(M34) DT(N29):DA(M33) DT(N30):DA(M32) DC(N31):DG(M31) DT(N32):DA(M30) DC(N33):DG(M29) DT(N34):DA(M28) DA(N35):DT(M27) DA(N36):DT(M26) chain4 chain6 chain7 chainK (312) ARG321 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 chainL ( 2) ARG62 0 0 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lgqklviwgtdvnvaackenfqrflqrfidplteplymqrlgeinvigepflnvncehiksfdknlyrqlisypqeviptfdmavneiffdrypdsilehqiqvrpfnalktknmrnlnpedidqlitisgmvirtsqlipemqeaffqcqvcahttrvemdrgriaepsvcgrchtthsmalihnrslfsdkqmiklqespedmpagqtphtvilfahndlvdkvqpgdrvnvtgiyravpirvnprvsnvksvykthidvihyrktsekrvellkelsrkpdiyerlasalapsiyehedikkgillqlfggtrkfraeinillcgdpgtsksqllqyvynlvprgqytsgkgssavgltayvmkdpetrqlvlqtgalvlsdngiccidefdkmnestrsvlhevmeqqtlsiakagiicqlnartsvlaaanpwnpkkttieniqlphtllsrfdlifllldpqdeaydrrlahhlvalyyqseeqaeeelldmavlkdyiayahstimprlseeasqalieayvdmrkigssrgmvsayprqleslirlaeahakvrlsnkveaidveeakrlhrealkqsatdprtgivdisilttgmsatsrkrkeelaealkklilskgktpalkyqqlfedirgqsdiaitkdmfeealraladddfltvtgktvrll/evrdevaekcqklfldfleefqssdgeikylqlaeelirperntlvvsfvdleqfnqqlsttiqeefyrvypylcralktfvkdrkeiplakdfyvafqdlptrhkireltssriglltrisgqvvrthpvhpelvsgtflcldcqtvirdveqqfkytqpnicrnpvcanrrrflldtnksrfvdfqkvriqetqaelprgsiprslevilraeavesaqagdkcdftgtlivvpdvsklstpgaraetetegirglralgvrdlsyrlvflaccvaptaesiknqmtvkewekvfemsqdknlyhnlctslfptihgndevkrgvllmlfggvpkttgegtslrgdinvcivgdpstaksqflkhveefspravytsgkassaagltaavvrdeeshefvieagalmladngvccidefdkmdvrdqvaiheameqqtisitkagvkatlnartsilaaanpisghydrskslkqninlsapimsrfdlffilvdecnevtdyaiarrivdlhsrvyslddirryllfarqfkpkiskesedfiveqykhlrqrdgsgritvrqlesmirlseamarmhccdevqpkhvkeafrllnksiirvet/lkdyalekekvkkflqefyqddelgkkqfkygnqlvrlahreqvalyvdlddvaeddpelvdsicenarryaklfadavqellpqykerevvnkdvldvyiehrlmmeqpaelmrrfelyfqgpssnkprvirevradsvgklvtvrgivtrvsevkpkmvvatytcdqcgaetyqpiqsptfmplimcpsqecqtnrsggrlylqtrgsrfikfqemkmqehsdqvpvgniprsitvlvegentriaqpgdhvsvtgiflpilrtgllsetyleahrivkmdfyeklaasiapeiyghedvkkalllllvggvdqsprgmkirgniniclmgdpgvaksqllsyidrlaprsqyttgrgssgvgltaavlrtleggalvladqgvccidefdkmaeadrtaihevmeqqtisiakagilttlnarcsilaaanpaygrynprrsleqniqlpaallsrfdllwliqdrpdrdndlrlaqhityvhqhdmklmrryiamcrekqpmvpesladyitaayvemrreawastytsartllailrlstalarlrmvdvvekedvneairlmemskdsll/ncellatcsalgylegdtyhkepdclesvkdlirylrhedetrdvrqqlgaaqilqsdllpiltqhhqdkplfdavirlmvnltqpallcfgnlpkepsfrhhflqvltylqaykeafasekafgvlsetlyellqlgrqeednllierilllvrnilhvpadldqekkidddasahdqllwaihlsglddlllflasssaeeqwslhvleivslmfrdqnpeqlagvgqgrlaqersadfaelevlrqremaekktralqrgnrhsrfggsyivqglksigerdlifhkglhnlrnyssdlgkqpkkvpkRrqaarelsiqrrsalnvrlflrdfcseflencynrlmgsvkdhllrekaqqhdetyymwalaffmafnraasfrpglvsetlsvrtfhfieqnltnyyemmltdrkeaaswarrmhlalkayqellatvnemdispdeavressriiknnifyvmeyrelflalfrkfdercqprsflrdlvetthlflkmlerfcrsrgnlvvqekefnfldylkrfacstvvrayvlllrsyqqnsahtnhcivkmlhrlahdlkmeallfqlsvfclfnrllsdpaagaykelvtfakyilgkffalaavnqkafvellfwkntavvremteg/kRnipkldaqrliserglpalrhvfdkakfkgkgheaedlkmlirhmehwahrlfpklqfedfidrveylgskkevqtclkrirldl >8b9d_5:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=HUMAN REPLISOME BOUND BY POL ALPHA organism=? DNA sequence DT(M26) DT(M27) DA(M28) DG(M29) DA(M30) DG(M31) DA(M32) DA(M33) DT(M34) DT(M35) DG(M36) DG(M37) DA(M38) DG(M39) DA(M40) DG(M41) DT(M42) DG(M43) DT(M44) DG(M45) DT(M46) DT(M51) DT(M52) DT(M53) DT(M54) DT(M55) DT(M56) DT(M57) DT(M58) DT(M59) DT(M60) DT(M61) chain5 (180) LEU209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (377) PHE427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence adegqarksqlqrrfkeflrqyrvgtdrtgftfkyrdelkrhynlgeywievemedlasfdedladylykqpaehlqlleeaakevadevtrprpsgeevlqdiqvmlksdaspssirslksdmmshlvkipgiiiaasavrakatrisiqcrscrntltniamrpglegyalprkccpLdpyfimpdkckcvdfqtlklqelpdavphgemprhmqlycdrylcdkvvpgnrvtimgiysikgvgirssyirvlgiqvdtgavspqeeeefrrlaalpnvyevisksiapsifggtdmkkaiacllfggsrkrlpdgltrrgdinllmlgdpgtaksqllkfvekcspigvytsgkgssaagltasvmRdpssrnFimeggamvladggvvcidefdkmreddrvaiheameqqtisiakagitttlnsrcsvlaaansvfgrwdetkgednidfmptilsrfdmifivkdehneerdvmlakhvitlhvsaltqteidlaklkkfiaycrvkcgprlsaeaaeklknryiimrsgarqherdsdrrssipitvrqleaivriaealskmklqpfateadveealrlfqvstldaa >8bd5_AEFGHIJQ:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CAS12K-SGRNA-DSDNA-S15-TNIQ-TNSC TRANSPOSON RECRUITMENT COMPLEX organism=? DNA sequence DT(D-8):DA(C8) DA(D-7):DT(C7) DG(D-6):DC(C6) DG(D-5):DC(C5) DA(D-4):DT(C4) DG(D-3):DC(C3) DG(D-2):DC(C2) DT(D-1):DA(C1) DT(D0):DA(C0) DC(D1):DC(C-1) DT(D2):DT(C-2) DC(D3):DC(C-3) DT(D4):DT(C-4) DT(D5):DT(C-5) DC(D6):DC(C-6) DA(D7):DA(C-7) DG(D8):DG(C-8) DT(D9):DT(C-9) DA(D10):DA(C-10) DT(D11):DA(C-11) DT(D12):DA(C-12) DA(D13):DT(C-13) DA(D14):DT(C-14) DT(D15):DA(C-15) DA(D16):DT(C-16) DA(D17):DT(C-17) DG(D18):DC(C-18) DG(D19):DC(C-19) DC(D20):DG(C-20) DC(D21):DG(C-21) DA(D22):DT(C-22) DC(D23):DG(C-23) DT(D24):DA(C-24) DG(D25):DC(C-25) DT(D26):DA(C-26) DT(D27):DA(C-27) DA(D28):DT(C-28) DA(D29):DT(C-29) DA(D30):DT(C-30) DC(D31):DG(C-31) DG(D32):DC(C-32) chainA ( 3) GLN3 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) SER56 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG78 0 0 0 0 0 6 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) MET81 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) HIS85 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) TYR89 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) SER93 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 97) ILE97 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) GLN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) ARG110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) LEU174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) SER175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LYS176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) PHE179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLN183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) CYS202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) LYS203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) LYS266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (238) GLN269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) ASP270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) GLU286 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) THR287 0 0 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) ASN306 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ASN351 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) CYS376 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) PHE401 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (387) LEU418 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (390) ARG421 0 0 0 0 0 0 17 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (475) GLN506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (521) ARG552 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (528) ILE559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (531) ILE562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (535) LYS566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (536) PHE567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (539) TYR570 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) GLU572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) TYR577 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (547) ALA578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (550) TYR581 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (555) HIS586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (581) LYS612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (584) ILE615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (134) LYS150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainF chainG chainH chainI chainJ chainQ ( 32) SER38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ALA48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) HIS57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ASN59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence asQitiqarlisfesnrqqlwklmadlntplinellcqlgqhpdfekwqqkgklpStvvsqlcqplktdprfagqpsRlyMsaiHivdYiykSwlaIqkrlqQqldgktRwlemlnsdaelvelsgdtleairvkaaeilaiLSKtlFdayQetediksrsaisyllkngCKltdkeedsekfakrrrqveiqiqrlteklisrmpkgrdltnakwletlltatttvaednaqaKrwQDilltrssslpfplvfETnedmvwsknqkgrlcvhfNglsdlifevycgnrqlhwfqrfledqqtkrksknqhssglftlrNghlvwlegegkgepwnlhhltlycCvdnrlwteegteivrqekadeitkFitnmkkksdlsdtqqaLiqRkqstltrinnsferpsqplyqgqshilvgvslglekpatvavvdaiankvlayrsikqllgdnyellnrqrrqqqylsheRhkaQknfspnqfgaselgqhidrllakaivalartykagsivlpklgdmRevvqseIqaIaeqKFpgYiEgqqkYAkqYrvnvHrwsygrliqsiqskaaqtgivieegKqpIrgsphdkakelalsaynlrlt/ddewlqaeiarlkgksivplqqvktlhdwldgkrkarkscrvvgesrtgktvacdayryrhkpqqeagrpptvpvvyirphqkcgpkdlfkkiteylkyrvtkgtvsdfrdrtievlkgcgvemliideadrlKpetfadvrdiaedlgiavvlvgtdrldavikrdeqvlerfrahlrfgklsgedfkntvemweqmvlklpvssnlkskemlriltsategyigrldeilreaairslsrglkkidkavlqevakeyk/ddewlqaeiarlkgksivplqqvktlhdwldgkrkarkscrvvgesrtgktvacdayryrhkpqqeagrpptvpvvyirphqkcgpkdlfkkiteylkyrvtkgtvsdfrdrtievlkgcgvemliideadrlKpetfadvrdiaedlgiavvlvgtdrldavikrdeqvlerfrahlrfgklsgedfkntvemweqmvlklpvssnlkskemlriltsategyigrldeilreaairslsrglkkidkavlqevakeyk/ddewlqaeiarlkgksivplqqvktlhdwldgkrkarkscrvvgesrtgktvacdayryrhkpqqeagrpptvpvvyirphqkcgpkdlfkkiteylkyrvtkgtvsdfrdrtievlkgcgvemliideadrlKpetfadvrdiaedlgiavvlvgtdrldavikrdeqvlerfrahlrfgklsgedfkntvemweqmvlklpvssnlkskemlriltsategyigrldeilreaairslsrglkkidkavlqevakeyk/ddewlqaeiarlkgksivplqqvktlhdwldgkrkarkscrvvgesrtgktvacdayryrhkpqqeagrpptvpvvyirphqkcgpkdlfkkiteylkyrvtkgtvsdfrdrtievlkgcgvemliideadrlKpetfadvrdiaedlgiavvlvgtdrldavikrdeqvlerfrahlrfgklsgedfkntvemweqmvlklpvssnlkskemlriltsategyigrldeilreaairslsrglkkidkavlqevakeyk/ddewlqaeiarlkgksivplqqvktlhdwldgkrkarkscrvvgesrtgktvacdayryrhkpqqeagrpptvpvvyirphqkcgpkdlfkkiteylkyrvtkgtvsdfrdrtievlkgcgvemliideadrlKpetfadvrdiaedlgiavvlvgtdrldavikrdeqvlerfrahlrfgklsgedfkntvemweqmvlklpvssnlkskemlriltsategyigrldeilreaairslsrglkkidkavlqevakeyk/ddewlqaeiarlkgksivplqqvktlhdwldgkrkarkscrvvgesrtgktvacdayryrhkpqqeagrpptvpvvyirphqkcgpkdlfkkiteylkyrvtkgtvsdfrdrtievlkgcgvemliideadrlKpetfadvrdiaedlgiavvlvgtdrldavikrdeqvlerfrahlrfgklsgedfkntvemweqmvlklpvssnlkskemlriltsategyigrldeilreaairslsrglkkidkavlqevakeyk/vkpwlflikpyegeslshflgrfrranhlsaSglgtlagigAivaRwerfHfNprpsqqeleaiasvvevdaqrlaqmlppagvgmqhepirlcgacyaespchriewqyksvwkcdrhqlkilakcpncqapfkmpalwedgcchrcrmpfaemaklqkv >8bh3_ABC: title=DNA-PK KU80 MEDIATED DIMER BOUND TO PAXX organism=? DNA sequence DT(d14):DA(e42) DA(d15):DT(e41) DA(d16):DT(e40) DT(d17):DA(e39) DA(d18):DT(e38) DA(d19):DT(e37) DT(d20):DA(e36) DA(d21):DT(e35) DG(d22):DC(e34) DT(d23):DA(e33) DT(d24):DA(e32) DT(d25):DA(e31) DT(d26):DA(e30) DT(d27):DA(e29) DA(d28):DT(e28) DG(d29):DC(e27) DT(d30):DA(e26) DT(d31):DA(e25) DT(d32):DA(e24) DA(d33):DT(e23) DT(d34):DA(e22) DT(d35):DA(e21) DG(d36):DT(e20) DG(d37):DC(e19) DG(d38):DG(e18) DC(d39):DA(e17) chainA (249) LYS263 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) ARG264 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (223) ARG254 0 0 0 0 0 0 0 0 0 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) ARG403 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 16 2 0 0 0 0 0 prot.sequence csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlqidlKRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiinkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqdrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladslnhllydefvksvlkivekldltleiqanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsfnkvvlkhlkktknlsleeirirvvqmlgslggqinknllmmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcftspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiasldlsckqlasgllelafafgglcerlvslllnpavlshfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpffleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrtrqsfvdrslltllwhcsldalreffstivvdaidvlktfdtqitkkmgyykildvmysrlpneltktliklcydaftenlerrrlyhcaayncaisviccvfnelkfyqdstlseemsqfdfstgvrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasengegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdtdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltgrtdllrlrrrfmrdqeklslmyarkgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrlllppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsekiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgedsekviaglyqrafqhlseavqaaeeeagvidaymtladfcdqqlrkeeeaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiisseststghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelavnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkgsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwldvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/ysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdynpeg/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakknpaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkflakdkpsgdtaavfeeggdvddlldmi >8bh3_LST: title=DNA-PK KU80 MEDIATED DIMER BOUND TO PAXX organism=? DNA sequence DG(i18):DG(j38) DC(i19):DG(j37) DT(i20):DG(j36) DA(i21):DT(j35) DA(i22):DT(j34) DT(i23):DA(j33) DA(i24):DT(j32) DA(i25):DT(j31) DA(i26):DT(j30) DC(i27):DG(j29) DT(i28):DA(j28) DA(i29):DT(j27) DA(i30):DT(j26) DA(i31):DT(j25) DA(i32):DT(j24) DA(i33):DT(j23) DC(i34):DG(j22) DT(i35):DA(j21) DA(i36):DT(j20) DT(i37):DA(j19) DT(i38):DA(j18) DA(i39):DT(j17) DT(i40):DA(j16) DT(i41):DA(j15) DA(i42):DT(j14) chainL (385) ARG400 0 0 0 0 4 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainS (249) LYS263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 (250) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 chainT (218) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 5 0 0 0 0 0 0 0 0 (367) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakknpaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkfggdvddlldmi/csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlqidlKRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiinkelsiairgyglfagpckvinakdvdfmyveliqrckqmflvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladslnhllydefvksvlkivekldltleiqanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsfnkvvlkhlkktknlsleeirirvvqmlgslggqinknllmmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcftspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiasldlsckqlasgllelafafgglcerlvslllnpavlfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpffleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrtrqsfvdrslltllwhcsldalreffstivvdaidvlktfdtqitkkmgyykildvmysrlpneltktliklcydaftenlerrrlyhcaayncaisviccvfnelkfyqstlseemsqfdfstgvqrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasengegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdtdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltgrtdllrlrrrfmrdqeklslmyarkgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrlllppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsekiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgedsekviaglyqrafqhlseavqaaeeeagvidaymtladfcdqqlrkeeeaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiisseststghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelavnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkgsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwldvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafglltntmdvfvkepsfdwknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/ysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisilrvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdynpeg >8bh3_S:Protein_kinase-like_PK-like;ARM_repeat; title=DNA-PK KU80 MEDIATED DIMER BOUND TO PAXX organism=? DNA sequence DT(j14):DA(i42) DA(j15):DT(i41) DA(j16):DT(i40) DT(j17):DA(i39) DA(j18):DT(i38) DA(j19):DT(i37) DT(j20):DA(i36) DA(j21):DT(i35) DG(j22):DC(i34) DT(j23):DA(i33) DT(j24):DA(i32) DT(j25):DA(i31) DT(j26):DA(i30) DT(j27):DA(i29) DA(j28):DT(i28) DG(j29):DC(i27) DT(j30):DA(i26) DT(j31):DA(i25) DT(j32):DA(i24) DA(j33):DT(i23) DT(j34):DA(i22) DT(j35):DA(i21) DG(j36):DT(i20) DG(j37):DC(i19) DG(j38):DG(i18) chainS (249) LYS263 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) ARG264 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlqidlKRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiinkelsiairgyglfagpckvinakdvdfmyveliqrckqmflvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladslnhllydefvksvlkivekldltleiqanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsfnkvvlkhlkktknlsleeirirvvqmlgslggqinknllmmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcftspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiasldlsckqlasgllelafafgglcerlvslllnpavlfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpffleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrtrqsfvdrslltllwhcsldalreffstivvdaidvlktfdtqitkkmgyykildvmysrlpneltktliklcydaftenlerrrlyhcaayncaisviccvfnelkfyqstlseemsqfdfstgvqrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasengegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdtdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltgrtdllrlrrrfmrdqeklslmyarkgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrlllppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsekiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgedsekviaglyqrafqhlseavqaaeeeagvidaymtladfcdqqlrkeeeaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiisseststghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelavnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkgsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwldvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafglltntmdvfvkepsfdwknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm >8bhv_Aab: title=DNA-PK XLF MEDIATED DIMER BOUND TO PAXX organism=? DNA sequence DC(D12):DG(E44) DC(D13):DT(E43) DA(D14):DA(E42) DA(D15):DT(E41) DA(D16):DT(E40) DT(D17):DA(E39) DA(D18):DT(E38) DA(D19):DT(E37) DT(D20):DA(E36) DA(D21):DT(E35) DG(D22):DC(E34) DT(D23):DA(E33) DT(D24):DA(E32) DT(D25):DA(E31) DT(D26):DA(E30) DT(D27):DA(E29) DA(D28):DT(E28) DG(D29):DC(E27) DT(D30):DA(E26) DT(D31):DA(E25) DT(D32):DA(E24) DA(D33):DT(E23) DT(D34):DA(E22) DT(D35):DA(E21) DG(D36):DT(E20) DG(D37):DC(E19) DG(D38):DG(E18) chainA (115) LYS124 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ILE125 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (425) LYS452 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (721) LYS835 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (725) ASN839 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1891) ARG2228 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1975) TYR2312 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2278) LYS2738 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2282) MET2742 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2285) ARG2745 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2286) LYS2746 6 0 32 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2289) ALA2749 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2290) GLU2750 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaina (221) ARG254 0 0 0 0 0 0 0 0 0 0 1 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 (224) SER257 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) LYS287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (265) THR298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (370) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainb (240) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 (242) LYS273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (362) TYR397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (365) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 prot.sequence csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakcKIpaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiinkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqdrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspKmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladslnhllydefvksvlkivekldltleiqanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsfnkvvlkhlKktkNlssneaisleeirirvvqmlgslggqinknllmmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcftspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiasldlsckqlasgllelafafgglcerlvslllnpahfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpffleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrtrqsfvdrslltllwhcsldalreffstivvdaidvlktfdtqitkkmgyykildvmysrlpneltktliklcydaftenlerrrlyhcaayncaisviccvfnelkfyqstlseemsqfdfstgvqrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasengegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkRavfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrYkevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltgrtdllrlrrrfmrdqeKlslMyaRKgvAEqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrlllppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsekiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgedsekviaglyqrafqhlseavqaaeeeagvidaymtladfcdqqlrkeeeaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiisseststghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelavnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkgsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwldvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/grdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketrkRalSrlklklnkdivisvgiynlvqkalkpppiKlyretnepvkTktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdynpeg/aavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslgkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvKktwtvvdaktlkkediqketvycletevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaYdkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieavtaqeifqdnhedgptakklkteqggahfsvssnpaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeak >8bhv_Fhj: title=DNA-PK XLF MEDIATED DIMER BOUND TO PAXX organism=? DNA sequence DA(I22):DT(J34) DT(I23):DA(J33) DA(I24):DT(J32) DA(I25):DT(J31) DA(I26):DT(J30) DC(I27):DG(J29) DT(I28):DA(J28) DA(I29):DT(J27) DA(I30):DT(J26) DA(I31):DT(J25) DA(I32):DT(J24) DA(I33):DT(J23) DC(I34):DG(J22) DT(I35):DA(J21) DA(I36):DT(J20) DT(I37):DA(J19) DT(I38):DA(J18) DA(I39):DT(J17) DT(I40):DA(J16) DT(I41):DA(J15) DA(I42):DT(J14) DT(I43):DA(J13) DG(I44):DC(J12) chainF (249) LYS263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (250) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 (292) VAL306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (1887) ARG2228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (1970) ARG2311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (1972) LYS2313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (2276) LYS2738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (2280) MET2742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 (2281) TYR2743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (2283) ARG2745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (2284) LYS2746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 chainh (219) ARG252 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (221) ARG254 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 (254) LYS287 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainj (210) SER244 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) ILE245 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) LYS265 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) LYS273 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) GLN360 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) TYR397 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ASP398 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) ARG400 0 3 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (360) ALA401 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlqidlKRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnVelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiinkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqdrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladslnhllydefvksvlkivekldltleiqanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsfnkvvlkhlkktknlsleeirirvvqmlgslggqinknllmmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpppmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcftspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiadlsckqlasgllelafafgglcerlvslllnpavlstvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpffleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrtrqsfvdrslltllwhcsldalreffstivvdaidvlktfdtqitkkmgyykildvmysrlpneltktliklcydaftenlerrrlyhcaayncaisviccvfnelkfyqstlseemsqfdfstgvqsyrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasengegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkRavfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvRyKevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdtdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltgrtdllrlrrrfmrdqeKlslMYaRKgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrlllppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsekiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgedsekviaglyqrafqhlseavqaaeeeagvidaymtladfcdqqlrkeeeaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiisseststghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkgsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwldvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/grdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketRkRalsrlklklnkdivisvgiynlvqkalkpppiKlyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytprrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdynpeg/aavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfsliteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhSIhwpcrltigsnlsiriaayKsilqervKktwtvvdaktlkkediqketvycevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnQvlkvfaarddeaaavalsslihalddldmvaivryaYDkRAnpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfpliedqvtaqeifqdnhkteqggahfsvnpaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkf >8bhv_j:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=DNA-PK XLF MEDIATED DIMER BOUND TO PAXX organism=? DNA sequence DC(J12):DG(I44) DA(J13):DT(I43) DT(J14):DA(I42) DA(J15):DT(I41) DA(J16):DT(I40) DT(J17):DA(I39) DA(J18):DT(I38) DA(J19):DT(I37) DT(J20):DA(I36) DA(J21):DT(I35) DG(J22):DC(I34) DT(J23):DA(I33) DT(J24):DA(I32) DT(J25):DA(I31) DT(J26):DA(I30) DT(J27):DA(I29) DA(J28):DT(I28) DG(J29):DC(I27) DT(J30):DA(I26) DT(J31):DA(I25) DT(J32):DA(I24) DA(J33):DT(I23) DT(J34):DA(I22) chainj (210) SER244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (211) ILE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (231) LYS265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 (239) LYS273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (319) GLN360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 (356) TYR397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 (357) ASP398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 (359) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 3 0 (360) ALA401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence aavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfsliteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhSIhwpcrltigsnlsiriaayKsilqervKktwtvvdaktlkkediqketvycevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnQvlkvfaarddeaaavalsslihalddldmvaivryaYDkRAnpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfpliedqvtaqeifqdnhkteqggahfsvnpaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkf >8bhy_ABC: title=DNA-PK KU80 MEDIATED DIMER BOUND TO PAXX AND XLF organism=? DNA sequence DG(e18):DG(d38) DC(e19):DG(d37) DT(e20):DG(d36) DA(e21):DT(d35) DA(e22):DT(d34) DT(e23):DA(d33) DA(e24):DT(d32) DA(e25):DT(d31) DA(e26):DT(d30) DC(e27):DG(d29) DT(e28):DA(d28) DA(e29):DT(d27) DA(e30):DT(d26) DA(e31):DT(d25) DA(e32):DT(d24) DA(e33):DT(d23) DC(e34):DG(d22) DT(e35):DA(d21) DA(e36):DT(d20) DT(e37):DA(d19) DT(e38):DA(d18) DA(e39):DT(d17) DT(e40):DA(d16) DT(e41):DA(d15) chainA (249) LYS263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 5 0 0 (250) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 chainB (223) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 1 0 0 0 0 0 0 0 0 (372) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 chainC (256) ARG271 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 0 4 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlqidlKRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiinkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqdrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladslnhllydefvksvlkivekldltleiqanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsfnkvvlkhlkktknlsleeirirvvqmlgslggqinknlksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcftspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiasldlsckqlasgllelafafgglcerlvslllnpavlshfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpffleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrtrqsfvdrslltllwhcsldalreffstivvdaidvlktfdtqitkkmgyykildvmysrlpneltktliklcydaftenlerrrlyhcaayncaisviccvfnelkfyqdstlseemsqfdfstgvrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasengegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdtdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltgrtdllrlrrrfmrdqeklslmyarkgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrlllppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsekiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgedsekviaglyqrafqhlseavqaaeeeagvidaymtladfcdqqlrkeeeaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiisseststghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelavnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkgsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwldvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/ysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisiaededlrvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdynpeg/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakknpaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkflakdkpsgdtaavfeeggdvddlldmi >8bhy_C:SPOC_domain-like;vWA-like;C-terminal_domain_of_Ku80; title=DNA-PK KU80 MEDIATED DIMER BOUND TO PAXX AND XLF organism=? DNA sequence DA(d15):DT(e41) DA(d16):DT(e40) DT(d17):DA(e39) DA(d18):DT(e38) DA(d19):DT(e37) DT(d20):DA(e36) DA(d21):DT(e35) DG(d22):DC(e34) DT(d23):DA(e33) DT(d24):DA(e32) DT(d25):DA(e31) DT(d26):DA(e30) DT(d27):DA(e29) DA(d28):DT(e28) DG(d29):DC(e27) DT(d30):DA(e26) DT(d31):DA(e25) DT(d32):DA(e24) DA(d33):DT(e23) DT(d34):DA(e22) DT(d35):DA(e21) DG(d36):DT(e20) DG(d37):DC(e19) DG(d38):DG(e18) chainC (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 4 0 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqeRvkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakknpaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkflakdkpsgdtaavfeeggdvddlldmi >8bhy_LST: title=DNA-PK KU80 MEDIATED DIMER BOUND TO PAXX AND XLF organism=? DNA sequence DC(i19):DG(j37) DT(i20):DG(j36) DA(i21):DT(j35) DA(i22):DT(j34) DT(i23):DA(j33) DA(i24):DT(j32) DA(i25):DT(j31) DA(i26):DT(j30) DC(i27):DG(j29) DT(i28):DA(j28) DA(i29):DT(j27) DA(i30):DT(j26) DA(i31):DT(j25) DA(i32):DT(j24) DA(i33):DT(j23) DC(i34):DG(j22) DT(i35):DA(j21) DA(i36):DT(j20) DT(i37):DA(j19) DT(i38):DA(j18) DA(i39):DT(j17) DT(i40):DA(j16) DT(i41):DA(j15) chainL (382) TYR397 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 4 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainS (249) LYS263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 (250) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 chainT (367) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaYdkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakknpaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkfggdvddlldmi/csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlqidlKRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiinkelsiairgyglfagpckvinakdvdfmyveliqrckqmflvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladslnhllydefvksvlkivekldltleiqanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsfnkvvlkhlkktknlsleeirirvvqmlgslggqinknllmmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcftspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiasldlsckqlasgllelafafgglcerlvslllnpavshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpffleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrtrqsfvdrslltllwhcsldalreffstivvdaidvlktfdtqitkkmgyykildvmysrlpneltktliklcydaftenlerrrlyhcaayncaisviccvfnelkfyqstlseemsqfdfstgvqrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasengegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdtdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltgrtdllrlrrrfmrdqeklslmyarkgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrlllppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsekiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgedsekviaglyqrafqhlseavqaaeeeagvidaymtladfcdqqlrkeeeaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiisseststghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelavnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkgsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwldvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafglltntmdvfvkepsfdwknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/ysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisilrvhfeesskledllrkvraketrkralsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdynpeg >8bot_ABC: title=CRYO-EM STRUCTURE OF NHEJ SUPERCOMPLEX(TRIMER) organism=? DNA sequence DA(D21):DT(E35) DA(D22):DT(E34) DT(D23):DA(E33) DA(D24):DT(E32) DA(D25):DT(E31) DA(D26):DT(E30) DC(D27):DG(E29) DT(D28):DA(E28) DA(D29):DT(E27) DA(D30):DT(E26) DA(D31):DT(E25) DA(D32):DT(E24) DA(D33):DT(E23) DC(D34):DG(E22) DT(D35):DA(E21) DA(D36):DT(E20) DT(D37):DA(E19) DT(D38):DA(E18) DA(D39):DT(E17) DT(D40):DA(E16) DT(D41):DA(E15) DA(D42):DT(E14) chainA (147) LYS164 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (152) THR169 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (199) LYS216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (201) PRO218 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (246) LYS263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 (247) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (248) TYR265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (287) THR304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (2000) LYS2313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 chainB ( 43) ARG80 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 (191) ARG252 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 (193) ARG254 0 0 0 0 0 0 0 0 0 0 0 7 21 0 0 0 0 0 0 0 0 0 (194) ALA255 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (195) LEU256 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 (214) ASN275 0 0 0 0 0 0 0 0 0 12 0 3 0 0 0 0 0 0 0 0 0 0 (217) GLN278 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 (219) ALA280 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (221) LYS282 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) PRO285 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) PRO364 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) TYR409 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) ARG444 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (202) ARG242 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) HIS243 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) VAL272 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (233) THR275 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ASN359 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) GLN360 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (354) TYR397 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) ARG400 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ALA401 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (361) GLN404 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence csllrlqetlsaadgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkkipaldllikllqtfrssrlmdefkigelfskfygelalkKkipdTvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepKlPvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlKRYavpsaglrlfalhasqfstclldnyvslfevllkwcahTnvelkkaalsalesflkqvsnmvaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladeassseslnhllydefvksvlkivekldltleiqsdpaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegvspdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsaaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatpmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptllylrgpfslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekpqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiappsldlsckqlasgllelafafgglcerlvslllnpavlsfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftkestfdtqitkkmgyykildvmysrddvhakeskinqvfneltktliklcydaftenmllerrrlyhcaayncaisviccvlkfyqgflfpeknllifenlidlkrmdelnrhecmapltalvkhmhrsllpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasenymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfdnsvgiqllgivmandlppydpseyfqalvnnmsfvryKevyaaaaevlglilryeeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrpdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgsssedsekviaglyqrafqhlseavqaaeegvidaymtladfcdqqlrkeeelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvariksklgviqdfinaldqlsnpellfkdwsndvraelakkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvmtsrlgliewlentvtlkdlllntmsqeekaayappceykdwltkmdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavardhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/ysgrdsliflvdaskamfeltpfdmsiqciqsvyiskiissdRdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednpakasrartkagdlrdtgifldlmhlkfdislfyrdiiskledllrkvraketRkRALsrlklklnkdivisvgiyNlvQkAlKppPiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrPslfvypeeslvigsstlfsallikclekevaalcrytprrnippYfvalvpqeeelddqkiqvtppgfqlvflpfaddkRkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdtmsnespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkieRHsihwpcrltiglsiriaayksilqerVkkTwtvvdaktlkkediqketvyclnddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgNQvlkvfaarddeaaavalsslihalddldmvaivryaYdkRAnpQvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeif >8bot_F:Protein_kinase-like_PK-like;ARM_repeat; title=CRYO-EM STRUCTURE OF NHEJ SUPERCOMPLEX(TRIMER) organism=? DNA sequence DC(J12):DG(I44) DA(J13):DT(I43) DT(J14):DA(I42) DA(J15):DT(I41) DA(J16):DT(I40) DT(J17):DA(I39) DA(J18):DT(I38) DA(J19):DT(I37) DT(J20):DA(I36) DA(J21):DT(I35) DG(J22):DC(I34) DT(J23):DA(I33) DT(J24):DA(I32) DT(J25):DA(I31) DT(J26):DA(I30) DT(J27):DA(I29) DA(J28):DT(I28) DG(J29):DC(I27) DT(J30):DA(I26) DT(J31):DA(I25) DT(J32):DA(I24) DA(J33):DT(I23) DT(J34):DA(I22) DT(J35):DA(I21) DG(J36):DT(I20) DG(J37):DC(I19) DG(J38):DG(I18) chainF (250) ARG264 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) ASN305 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) GLU307 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1875) ARG2228 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2264) LYS2738 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2268) MET2742 4 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2269) TYR2743 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2271) ARG2745 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2272) LYS2746 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlqidlkRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtNvElkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiinkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqdrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladslnhllydefvksvlkivekldltleiqanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsfnkvvlkhlkktknlsleeirirvvqmlgslggqinknllmmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcftspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgialdlsckqlasgllelafafgglcerlvslllnpavlstvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpffleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrtrqsfvdrslltllwhcsldalreffstivvdaidvlktfdtqitkkmgyykildvmysrlpneltktliklcydaftenlerrrlyhcaayncaisviccvfnelkfyqrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasengegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkRavfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdtdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltgrtdllrlrrrfmrdqeKlslMYaRKgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrlllppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsekiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgedsekviaglyqrafqhlseavqaaeeeagvidaymtladfcdqqlrkeeeaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiisseststghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelavnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkgsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwldvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm >8bot_FGH: title=CRYO-EM STRUCTURE OF NHEJ SUPERCOMPLEX(TRIMER) organism=? DNA sequence DC(J12):DG(I44) DA(J13):DT(I43) DT(J14):DA(I42) DA(J15):DT(I41) DA(J16):DT(I40) DT(J17):DA(I39) DA(J18):DT(I38) DA(J19):DT(I37) DT(J20):DA(I36) DA(J21):DT(I35) DG(J22):DC(I34) DT(J23):DA(I33) DT(J24):DA(I32) DT(J25):DA(I31) DT(J26):DA(I30) DT(J27):DA(I29) DA(J28):DT(I28) DG(J29):DC(I27) DT(J30):DA(I26) DT(J31):DA(I25) DT(J32):DA(I24) DA(J33):DT(I23) DT(J34):DA(I22) DT(J35):DA(I21) DG(J36):DT(I20) DG(J37):DC(I19) DG(J38):DG(I18) chainF (250) ARG264 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) ASN305 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) GLU307 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1875) ARG2228 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2264) LYS2738 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2268) MET2742 4 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2269) TYR2743 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2271) ARG2745 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2272) LYS2746 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (237) LYS282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (242) LYS287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (358) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (399) ARG444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 chainH (226) GLU241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (227) ARG242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (250) LYS265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 (253) LEU268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 (382) TYR397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (385) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 prot.sequence csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlqidlkRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtNvElkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiinkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqdrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladslnhllydefvksvlkivekldltleiqanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsfnkvvlkhlkktknlsleeirirvvqmlgslggqinknllmmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcftspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgialdlsckqlasgllelafafgglcerlvslllnpavlstvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpffleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrtrqsfvdrslltllwhcsldalreffstivvdaidvlktfdtqitkkmgyykildvmysrlpneltktliklcydaftenlerrrlyhcaayncaisviccvfnelkfyqrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasengegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkRavfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdtdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltgrtdllrlrrrfmrdqeKlslMYaRKgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrlllppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsekiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgedsekviaglyqrafqhlseavqaaeeeagvidaymtladfcdqqlrkeeeaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiisseststghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelavnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkgsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwldvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/ysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisskledllrkvraketrkralsrlklklnkdivisvgiynlvqkalKpppiKlyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkRkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkiERhsihwpcrltigsnlsiriaayKsiLqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaYdkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplienpaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkflapk >8bot_STU: title=CRYO-EM STRUCTURE OF NHEJ SUPERCOMPLEX(TRIMER) organism=? DNA sequence DG(V18):DG(W38) DC(V19):DG(W37) DT(V20):DG(W36) DA(V21):DT(W35) DA(V22):DT(W34) DT(V23):DA(W33) DA(V24):DT(W32) DA(V25):DT(W31) DA(V26):DT(W30) DC(V27):DG(W29) DT(V28):DA(W28) DA(V29):DT(W27) DA(V30):DT(W26) DA(V31):DT(W25) DA(V32):DT(W24) DA(V33):DT(W23) DC(V34):DG(W22) DT(V35):DA(W21) DA(V36):DT(W20) DT(V37):DA(W19) DT(V38):DA(W18) DA(V39):DT(W17) DT(V40):DA(W16) DT(V41):DA(W15) DA(V42):DT(W14) DT(V43):DA(W13) DG(V44):DC(W12) chainS (154) LYS163 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) LYS164 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) ILE166 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) LEU262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (249) LYS263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 2 0 1 2 0 0 (250) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 (251) TYR265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (2269) MET2742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (2272) ARG2745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (2273) LYS2746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 chainT ( 49) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (209) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 2 7 22 0 0 0 0 0 0 0 0 (211) LEU256 0 0 0 0 0 0 0 0 0 0 0 3 0 13 17 0 1 0 0 0 0 0 0 0 0 0 0 (212) SER257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 6 2 0 0 0 0 0 0 0 0 0 0 (213) ARG258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (214) LEU259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (233) GLN278 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) LYS279 0 0 0 0 0 0 7 3 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) LEU281 0 0 0 0 0 1 16 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) LYS282 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) PRO284 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) PRO285 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) LYS287 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) THR300 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (298) PRO343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (358) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (359) ARG404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 20 0 0 0 0 0 0 0 0 0 0 0 (399) ARG444 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) VAL482 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU (120) LYS125 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (224) LYS239 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) ILE240 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (226) GLU241 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (227) ARG242 9 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (229) SER244 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) ILE245 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) TRP247 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) TYR264 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) LYS265 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) LEU268 0 0 0 0 0 1 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 9 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (257) VAL272 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (258) LYS273 0 0 0 0 0 15 0 1 13 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) THR275 0 0 0 0 0 0 0 0 0 6 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) TRP276 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) LYS291 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) TYR295 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) LYS307 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) LYS325 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) LYS332 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) LYS334 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ASN359 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) LEU362 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) TYR395 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) TYR397 0 0 0 2 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (383) ASP398 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (385) ARG400 0 0 0 0 19 10 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG486 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence csllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalKKkIpdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlqidLKRYavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiinkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqdrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlpwkvptykdyvdlfrhllssdqmmdsiladslnhllydefvksvlkivekldltleiqanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegdpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsfnkvvlkhlkktknlsleeirirvvqmlgslggqinknllmmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcftspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiasldlsckqlasgllelafafgglcerlvslllnpavlstvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpffleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrtrqsfvdrslltllwhcsldalreffstivvdaidvlktfdtqitkkmgyykildvmysrlpneltktliklcydaftenlerrrlyhcaayncaisviccvfnelkfyqrhecmapltalvkhmhrslrdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasengegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdtdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltgrtdllrlrrrfmrdqeklslMyaRKgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrlllppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsekiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekldisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgedsekviaglyqrafqhlseavqaaeeeagvidaymtladfcdqqlrkeeeaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiisseststghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelavnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkgsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwldvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm/ysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdRdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisskledllrkvraketrkRaLSRLklklnkdivisvgiynlvQKaLKpPPiKlyretnepvktkTrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddPglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRRnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkRkmpftekimatpeqvgkmkaiveklrftyrsdsfenpVlqqhfrnlealaldlmepeqavdltlpkveamn/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigKkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkKIERhSIhWpcrltigsnlsiriaaYKsiLqeRVKkTWtvvdaktlkkediqKetvYclndddetevlKediiqgfrygsdivpfsKvdeeqmKyKsegkcfsvlgfckssqvqrrffmgNqvLkvfaarddeaaavalsslihalddldmvaivrYaYDkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnpRfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplienpaenfrvlvkqkkasfeeasnqlinhieqfldtnetpyfmksidcirafreeaikfseeqrfnnflkalqekveikqlnhfweivvqdgitlitkeeasgssvtaeeakkflapk >8bpr_AB:P-loop_containing_nucleoside_triphosphate_hydrolases;Recombination_protein_RecR; title=COMPLEX OF RECF-RECO-RECR-DNA FROM THERMUS THERMOPHILUS (LOW RESOLUTION RECONSTRUCTION). organism=? DNA sequence DG(Y5):DC(X21) DG(Y6):DC(X20) DA(Y7):DT(X19) DT(Y8):DA(X18) DC(Y9):DG(X17) DC(Y10):DG(X16) DG(Y11):DC(X15) DC(Y12):DG(X14) DG(Y13):DC(X13) DG(Y14):DC(X12) DC(Y15):DG(X11) DA(Y16):DT(X10) DG(Y17):DC(X9) DA(Y18):DT(X8) DT(Y19):DA(X7) DC(Y20):DG(X6) DT(Y21):DA(X5) DG(Y22):DC(X4) DG(Y23):DC(X3) DC(Y24):DG(X2) DC(Y25):DG(X1) chainA (126) GLU126 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainB (125) GLU126 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 prot.sequence mrlllfrqrnfrnlaleayrpppglsalvganaqgktslllgihlalggevplgladlvrfgeeeawlhaevetelgayrlehrlgpggrevllngkrvslrtlwelpgsvlvspldleavlgpkEerrayldrliarfsrryaallsayekalrqrnallkaggeglsawdrelarygdeivalrrrflrrfapilrevhaalaakeaglrleetagegvlraleasraeerergqtlvgphrddlvfllegrpahrfasrgeaktlalalrlaehrllgehhgepplllvdewgeeldearrravlayaqalpqailagleappgvpvcsvvrgvvlcp/mrlllfrqrnfrnlaleayrpppglsalvganaqgktslllgihlalggevlgladlvrfgeeeawlhaevetelgayrlehrlgpggrevllngkrvslrtlwelpgsvlvspldleavlgpkEerrayldrliarfsrryaallsayekalrqrnallkaggeglsawdrelarygdeivalrrrflrrfapilrevhaalaakeaglrleetagegvlraleasraeerergqtlvgphrddlvfllegrpahrfasrgeaktlalalrlaehrllgehhgepplllvdewgeeldearrravlayaqalpqailagleappgvpvcsvvrgvvlcp >8bpr_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=COMPLEX OF RECF-RECO-RECR-DNA FROM THERMUS THERMOPHILUS (LOW RESOLUTION RECONSTRUCTION). organism=? DNA sequence DG(X1):DC(Y25) DG(X2):DC(Y24) DC(X3):DG(Y23) DC(X4):DG(Y22) DA(X5):DT(Y21) DG(X6):DC(Y20) DA(X7):DT(Y19) DT(X8):DA(Y18) DC(X9):DG(Y17) DT(X10):DA(Y16) DG(X11):DC(Y15) DC(X12):DG(Y14) DC(X13):DG(Y13) DG(X14):DC(Y12) DC(X15):DG(Y11) DG(X16):DC(Y10) DG(X17):DC(Y9) DA(X18):DT(Y8) DT(X19):DA(Y7) DC(X20):DG(Y6) DC(X21):DG(Y5) chainB (125) GLU126 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 prot.sequence mrlllfrqrnfrnlaleayrpppglsalvganaqgktslllgihlalggevlgladlvrfgeeeawlhaevetelgayrlehrlgpggrevllngkrvslrtlwelpgsvlvspldleavlgpkEerrayldrliarfsrryaallsayekalrqrnallkaggeglsawdrelarygdeivalrrrflrrfapilrevhaalaakeaglrleetagegvlraleasraeerergqtlvgphrddlvfllegrpahrfasrgeaktlalalrlaehrllgehhgepplllvdewgeeldearrravlayaqalpqailagleappgvpvcsvvrgvvlcp >8bq2_C:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=CRYOEM STRUCTURE OF THE PRE-SYNAPTIC RAD51 NUCLEOPROTEIN FILAMENT IN THE PRESENCE OF ATP AND CA2+ organism=? DNA sequence DG(W1) DG(W2) DA(W3) DG(W4) DG(W5) DA(W6) DG(W7) DG(W8) DA(W9) DG(W10) DG(W11) DA(W12) DG(W13) DG(W14) DA(W15) DG(W16) DG(W17) DA(W18) DG(W19) DG(W20) DA(W21) DG(W22) DG(W23) DA(W24) DG(W25) DG(W26) DA(W27) DG(W28) DG(W29) DA(W30) chainC (215) ARG235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (218) LEU238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (219) SER239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (251) ALA271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (253) VAL273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 prot.sequence gpqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvvAqVpkkpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgdakd >8br2_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=CRYOEM STRUCTURE OF THE POST-SYNAPTIC RAD51 NUCLEOPROTEIN FILAMENT IN THE PRESENCE OF ATP AND CA2+ organism=? DNA sequence DG(H1):DC(G20) DC(H2):DG(G19) DG(H3):DC(G18) DA(H4):DT(G17) DG(H5):DC(G16) DC(H6):DG(G15) DT(H7):DA(G14) DC(H8):DG(G13) DG(H9):DC(G12) DA(H10):DT(G11) DT(H11):DA(G10) DG(H12):DC(G9) DC(H13):DG(G8) DA(H14):DT(G7) DC(H15):DG(G6) DC(H16):DG(G5) DT(H17):DA(G4) DC(H18):DG(G3) DC(H19):DG(G2) DA(H20):DT(G1) chainA (215) ARG235 0 0 0 35 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) LEU238 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) SER239 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) VAL270 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) ALA271 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) VAL273 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) ASP274 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (215) ARG235 0 0 0 0 0 0 35 7 0 0 0 0 0 0 0 0 0 0 0 0 (218) LEU238 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) SER239 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 (250) VAL270 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) ALA271 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) VAL273 0 0 0 14 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (215) ARG235 0 0 0 0 0 0 0 0 0 36 14 0 0 0 0 0 0 0 0 0 (218) LEU238 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (219) SER239 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 (250) VAL270 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (251) ALA271 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) VAL273 0 0 0 0 0 0 18 12 0 0 0 0 0 0 0 0 0 0 0 0 (254) ASP274 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 chainD (215) ARG235 0 0 0 0 0 0 0 0 0 0 0 0 31 20 0 0 0 0 0 0 (218) LEU238 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 (219) SER239 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 (250) VAL270 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (251) ALA271 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (253) VAL273 0 0 0 0 0 0 0 0 0 14 11 0 0 0 0 0 0 0 0 0 (254) ASP274 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 chainE (215) ARG235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 25 0 0 0 (218) LEU238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 (219) SER239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 (250) VAL270 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (251) ALA271 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (253) VAL273 0 0 0 0 0 0 0 0 0 0 0 0 16 12 0 0 0 0 0 0 (254) ASP274 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainF (215) ARG235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 23 (218) LEU238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 (219) SER239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (250) VAL270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (251) ALA271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (253) VAL273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 10 0 0 0 (254) ASP274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 prot.sequence gpqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvVAqVDpkkpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgdakd/gpqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvVAqVdpkkpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgdakd/gpqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvVAqVDpkkpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgdakd/gpqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvVAqVDpkkpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgdakd/gpqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvVAqVDpkkpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgdakd/gpqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvVAqVDpkkpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgdakd >8br2_C:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=CRYOEM STRUCTURE OF THE POST-SYNAPTIC RAD51 NUCLEOPROTEIN FILAMENT IN THE PRESENCE OF ATP AND CA2+ organism=? DNA sequence DG(H1):DC(G20) DC(H2):DG(G19) DG(H3):DC(G18) DA(H4):DT(G17) DG(H5):DC(G16) DC(H6):DG(G15) DT(H7):DA(G14) DC(H8):DG(G13) DG(H9):DC(G12) DA(H10):DT(G11) DT(H11):DA(G10) DG(H12):DC(G9) DC(H13):DG(G8) DA(H14):DT(G7) DC(H15):DG(G6) DC(H16):DG(G5) DT(H17):DA(G4) DC(H18):DG(G3) DC(H19):DG(G2) DA(H20):DT(G1) chainC (215) ARG235 0 0 0 0 0 0 0 0 0 36 14 0 0 0 0 0 0 0 0 0 (218) LEU238 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (219) SER239 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 (250) VAL270 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (251) ALA271 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) VAL273 0 0 0 0 0 0 18 12 0 0 0 0 0 0 0 0 0 0 0 0 (254) ASP274 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gpqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvVAqVDpkkpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgdakd >8bvw_e:Histone-fold; title=RNA POLYMERASE II PRE-INITIATION COMPLEX WITH THE DISTAL +1 NUCLEOSOME (PIC-NUC18W) organism=? DNA sequence DT(T-196):DA(N196) DC(T-195):DG(N195) DG(T-194):DC(N194) DG(T-193):DC(N193) DA(T-192):DT(N192) DG(T-190):DC(N190) DT(T-189):DA(N189) DA(T-188):DT(N188) DT(T-187):DA(N187) DA(T-186):DT(N186) DT(T-185):DA(N185) DA(T-184):DT(N184) DT(T-183):DA(N183) DC(T-182):DG(N182) DT(T-181):DA(N181) DG(T-180):DC(N180) DA(T-179):DT(N179) DC(T-178):DG(N178) DA(T-177):DT(N177) DC(T-176):DG(N176) DG(T-175):DC(N175) DT(T-174):DA(N174) DG(T-173):DC(N173) DC(T-172):DG(N172) DC(T-171):DG(N171) DT(T-170):DA(N170) DG(T-169):DC(N169) DG(T-168):DC(N168) DA(T-167):DT(N167) DG(T-166):DC(N166) DA(T-165):DT(N165) DC(T-164):DG(N164) DT(T-163):DA(N163) DA(T-162):DT(N162) DG(T-161):DC(N161) DG(T-160):DC(N160) DG(T-159):DC(N159) DA(T-158):DT(N158) DG(T-157):DC(N157) DT(T-156):DA(N156) DA(T-155):DT(N155) DA(T-154):DT(N154) DT(T-153):DA(N153) DC(T-152):DG(N152) DC(T-151):DG(N151) DC(T-150):DG(N150) DC(T-149):DG(N149) DT(T-148):DA(N148) DT(T-147):DA(N147) DG(T-146):DC(N146) DG(T-145):DC(N145) DC(T-144):DG(N144) DG(T-143):DC(N143) DG(T-142):DC(N142) DT(T-141):DA(N141) DT(T-140):DA(N140) DA(T-139):DT(N139) DA(T-138):DT(N138) DA(T-137):DT(N137) DA(T-136):DT(N136) DC(T-135):DG(N135) DG(T-134):DC(N134) DC(T-133):DG(N133) DG(T-132):DC(N132) DG(T-131):DC(N131) DG(T-130):DC(N130) DG(T-129):DC(N129) DG(T-128):DC(N128) DA(T-127):DT(N127) DC(T-126):DG(N126) DA(T-125):DT(N125) DG(T-124):DC(N124) DC(T-123):DG(N123) DG(T-122):DC(N122) DC(T-121):DG(N121) DG(T-120):DC(N120) DT(T-119):DA(N119) DA(T-118):DT(N118) DC(T-117):DG(N117) DG(T-116):DC(N116) DT(T-115):DA(N115) DG(T-114):DC(N114) DC(T-113):DG(N113) DG(T-112):DC(N112) DT(T-111):DA(N111) DT(T-110):DA(N110) DT(T-109):DA(N109) DA(T-108):DT(N108) DA(T-107):DT(N107) DG(T-106):DC(N106) DC(T-105):DG(N105) DG(T-104):DC(N104) DG(T-103):DC(N103) DT(T-102):DA(N102) DG(T-101):DC(N101) DC(T-100):DG(N100) DT(T-99):DA(N99) DA(T-98):DT(N98) DG(T-97):DC(N97) DA(T-96):DT(N96) DG(T-95):DC(N95) DC(T-94):DG(N94) DT(T-93):DA(N93) DG(T-92):DC(N92) DT(T-91):DA(N91) DC(T-90):DG(N90) DT(T-89):DA(N89) DA(T-88):DT(N88) DC(T-87):DG(N87) DG(T-86):DC(N86) DA(T-85):DT(N85) DC(T-84):DG(N84) DC(T-83):DG(N83) DA(T-82):DT(N82) DA(T-81):DT(N81) DT(T-80):DA(N80) DT(T-79):DA(N79) DG(T-78):DC(N78) DA(T-77):DT(N77) DG(T-76):DC(N76) DC(T-75):DG(N75) DG(T-74):DC(N74) DG(T-73):DG(N72) DC(T-71):DG(N71) DT(T-70):DG(N69) DG(T-68):DC(N67) DC(T-66):DG(N66) DA(T-65):DT(N65) DC(T-64):DG(N64) DC(T-63):DG(N63) DG(T-62):DC(N62) DG(T-61):DC(N61) DG(T-60):DC(N60) DA(T-59):DT(N59) DT(T-58):DA(N58) DT(T-57):DA(N57) DC(T-56):DG(N56) DT(T-55):DA(N55) DC(T-54):DG(N54) DG(T-53):DC(N53) DA(T-52):DT(N52) DT(T-51):DA(N51) DC(T-50):DG(N50) DA(T-49):DT(N49) DG(T-48):DC(N48) DC(T-47):DG(N47) DG(T-46):DC(N46) DA(T-45):DT(N45) DT(T-44):DA(N44) DG(T-43):DC(N43) DC(T-42):DG(N42) DG(T-41):DC(N41) DG(T-40):DC(N40) DA(T-39):DT(N39) DA(T-38):DT(N38) DG(T-37):DC(N37) DA(T-36):DT(N36) DG(T-35):DC(N35) DA(T-34):DT(N34) DG(T-33):DC(N33) DT(T-32):DA(N32) DG(T-31):DC(N31) DA(T-30):DT(N30) DG(T-29):DC(N29) DG(T-28):DC(N28) DA(T-27):DT(N27) DC(T-26):DG(N26) DG(T-25):DC(N25) DA(T-24):DT(N24) DA(T-23):DT(N23) DC(T-22):DG(N22) DG(T-21):DC(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DC(T-17):DG(N17) DC(T-16):DG(N16) DC(T-15):DG(N15) DC(T-14):DG(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DC(T-11):DG(N11) DC(T-10):DG(N10) DC(T-9):DG(N9) DC(T-8):DG(N8) DT(T-7):DA(N7) DT(T-6):DA(N6) DT(T-5):DA(N5) DT(T-4):DA(N4) DA(T-3):DT(N3) DT(T-2):DA(N2) DA(T-1):DT(N1) DG(T0):DC(N0) DC(T1):DG(N-1) DC(T2):DG(N-2) DC(T3):DG(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DT(T7):DA(N-7) DT(T8):DA(N-8) DC(T9):DG(N-9) chaine ( 4) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >8bws_ABE:"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF YEAST RNA POLYMERASE III ELONGATION COMPLEX AT 3.3 A organism=? DNA sequence DA(S35):DT(T18) DG(S36):DC(T17) DG(S37):DC(T16) DA(S38):DT(T15) DG(S39):DC(T14) DA(S40):DT(T13) DA(S41):DT(T12) DG(S42):DC(T11) DG(S43):DC(T10) DA(S44):DT(T9) DG(S45):DC(T8) DC(S46):DG(T7) DA(S47):DT(T6) DG(S48):DC(T5) DA(S49):DT(T4) DG(S50):DC(T3) DC(S51):DG(T2) DG(S52):DC(T1) chainA (1337) ARG1373 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (444) LYS479 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG481 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence kevvvsetpkrikglefsalsaadivaqsevevstrdlfdlekdrapkangaldpkmgvsssslecatchgnlaschghfghlklalpvfhigyfkatiqilqgickncsaillsetdkrqflhelrrpgvdnlrrmgilkkildqckkqrrclhcgalngvvkkaaagagsaalkiihdtfrwvgkksapekdiwvgewkevlahnpeleryvkrcmddlnplktlnlfkqiksadcellgidatvpsgrpetyiwrylpappvcirpsvmsneddltvklteivwtsslikagldkgisinnmmehwdylqltvamyinsdsvnppirgfcqrlkgkqgrfrgnlsgkrvdfsgrtvispdpnlsidevavpdrvakvltypekvtrynrhklqelivngpnvhpganyllkrnedarrnlrygdrmklaknlqigdvverhledgdvvlfnrqpslhrlsilshyakirpwrtfrlnecvctpynadfdgdemnlhvpqteearaeainlmgvknnlltpksgepiiaatqdfitgsylishkdsfydratltqllsmmsdgiehfdipppaimkpyylwtgkqvfsllikpnhnspvvinldaknkvfvppkskslpnemsqndgfviirgsqilsgvmdksvlgdgkkhsvfytilrdygpqeaanamnrmaklcarflgnrgfsigindvtpaddlkqkkeelveiayhkcdelitlfnkgeletqpgcneeqtleakiggllskvreevgdvcineldnwnaplimatcgskgstlnvsqmvavvgqqiisgnrvpdgfqdrslphfpknsktpqskgfvrnsffsglsppeflfhaisgreglvdtavktaetgymsrrlmksledlscqydntvrtsangivqftyggdgldplemegnaqpvnfnrswdhaynitfnnqdkgllpyaimetaneilgpleerlvrydnsgclvkredlnkaeyvdqydaerdfyhslreyingkatalanlrksrgmlglleppakelqgidpdetvpdnvktsvsqlyriseksvrkfleialfkyrkarlepgtaigaigaqsigepgtqmtlktfhfagvasmnvtlgvprikeiinaskvistpiinavlvndnderaarvvkgrvektllsdvafyvqdvykdnlsfiqvridlgtidklqleltiediavaitrasklkiqasdvniigkdriainvfpsendvfyrmqqlrralpdvvvkglpdisravinirddgkrellvegyglrdvmctdgvigsrtttnhvlevfsvlgieaarysiireinytmsnhgmsvdprhiqllgdvmtykgevlgitRfglskmrdsvlqlasfekttdhlfdaafymkkdavegvseciilgqtmsigtgsfkvvkgtnisekdlvpkrclfeslsneaalkan/deintaqdkwhllpaflkvkglvkqhldsfnyfvdtdlkkiikanqlilsdvdpefylkyvdirvgkksssstkdyltpphecrlrdmtysapiyvdieytrgrniimhkdveigrmpimlrsnkcilydadeskmaklnecpldpggyfivngtekvilvqeqlsknriiveadekkgivqasvtsstherksktyvitkngkiylkhnsiaeeipiaivlkacgilsdleimqlvcgndssyqdifavnleesskldiytqqqaleyigakvktmrrqkltilqegieaiattviahltvealdfrekalyiammtrrvvmamynpkmiddrdyvgnkrlelagqlisllfedlfkkfnndfklsidkvlkkpnrameydallsinvhsnnitsglnraistgnwslkrfkmeragvthvlsrlsyisalgmmtrissqfeKsRkvsgpralqpsqfgmlctadtpegeacglvknlalmthittddeeepikklcyvlgveditlidsaslhlnygvylngtligsirfptkfvtqfrhlrrtgkvsefisiysnshqmavhiatdggricrpliivsdgqsrvkdihlrklldgeldfddflklglveyldvneendsyialyekdivpsmthleiepftilgavaglipyphhnqsprntyqcamgkqaigaiaynqfkridtllylmtypqqpmvktktielidydklpagqnatvavmsysgydiedalvlnkssidrgfgrcetrrktttvlkryanhtqdiiggmrvdengdpiwqhqslgpdglgevgmkvqsgqiyinksvptnsaqtqyreapviyrgpepshidqvmmsvsdndqalikvllrqnrrpelgdkfssrhgqkgvcgiivkqedmpfndqgivpdiimnphgfpsrmtvgkmielisgkagvlngtleygtcfggskledmskilvdqgfnysgkdmlysgitgeclqayiffgpiyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcviaygasqlllerlmissdafevdvcdkcglmgysgwcttcksaeniikmtipyaakllfqellsmniaprlrledifqq/mdqenernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanpteesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklvpsippatietfneaalvvnithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirksetsgryasyricm >8byq_e:Histone-fold; title=RNA POLYMERASE II PRE-INITIATION COMPLEX WITH THE PROXIMAL +1 NUCLEOSOME (PIC-NUC10W) organism=? DNA sequence DG(N-9):DC(T9) DA(N-8):DT(T8) DA(N-7):DT(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DG(N-3):DC(T3) DG(N-2):DC(T2) DG(N-1):DC(T1) DC(N0):DG(T0) DT(N1):DA(T-1) DA(N2):DT(T-2) DT(N3):DA(T-3) DA(N4):DT(T-4) DA(N5):DT(T-5) DA(N6):DT(T-6) DA(N7):DT(T-7) DG(N8):DC(T-8) DG(N9):DC(T-9) DG(N10):DC(T-10) DG(N11):DC(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DG(N14):DC(T-14) DG(N15):DC(T-15) DG(N16):DC(T-16) DG(N17):DC(T-17) DG(N18):DC(T-18) DC(N19):DG(T-19) DG(N20):DC(T-20) DC(N21):DG(T-21) DG(N22):DC(T-22) DT(N23):DA(T-23) DT(N24):DA(T-24) DC(N25):DG(T-25) DG(N26):DC(T-26) DT(N27):DA(T-27) DC(N28):DG(T-28) DC(N29):DG(T-29) DT(N30):DA(T-30) DC(N31):DG(T-31) DA(N32):DT(T-32) DC(N33):DG(T-33) DT(N34):DA(T-34) DC(N35):DG(T-35) DT(N36):DA(T-36) DC(N37):DG(T-37) DT(N38):DA(T-38) DT(N39):DA(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DG(N42):DC(T-42) DA(N43):DT(T-43) DT(N44):DA(T-44) DC(N45):DG(T-45) DG(N46):DC(T-46) DA(N47):DT(T-47) DG(N48):DC(T-48) DA(N49):DT(T-49) DA(N50):DT(T-50) DT(N51):DA(T-51) DC(N52):DG(T-52) DC(N53):DG(T-53) DC(N54):DG(T-54) DG(N55):DC(T-55) DG(N56):DC(T-56) DT(N57):DA(T-57) DG(N58):DC(T-58) DC(N59):DG(T-59) DC(N60):DG(T-60) DG(N61):DC(T-61) DA(N62):DT(T-62) DG(N63):DC(T-63) DG(N64):DC(T-64) DC(N65):DG(T-65) DC(N66):DG(T-66) DG(N67):DC(T-67) DC(N68):DG(T-68) DT(N69):DA(T-69) DC(N70):DG(T-70) DA(N71):DT(T-71) DA(N72):DT(T-72) DT(N73):DA(T-73) DT(N74):DA(T-74) DG(N75):DC(T-75) DG(N76):DC(T-76) DT(N77):DA(T-77) DC(N78):DG(T-78) DG(N79):DC(T-79) DT(N80):DA(T-80) DA(N81):DT(T-81) DG(N82):DC(T-82) DA(N83):DT(T-83) DC(N84):DG(T-84) DA(N85):DT(T-85) DG(N86):DC(T-86) DC(N87):DG(T-87) DT(N88):DA(T-88) DC(N89):DG(T-89) DT(N90):DA(T-90) DA(N91):DT(T-91) DG(N92):DC(T-92) DC(N93):DG(T-93) DA(N94):DT(T-94) DC(N95):DG(T-95) DC(N96):DG(T-96) DG(N97):DC(T-97) DC(N98):DG(T-98) DT(N99):DA(T-99) DT(N100):DA(T-100) DA(N101):DT(T-101) DA(N102):DT(T-102) DA(N103):DT(T-103) DC(N104):DG(T-104) DG(N105):DC(T-105) DC(N106):DG(T-106) DA(N107):DT(T-107) DC(N108):DG(T-108) DG(N109):DC(T-109) DT(N110):DA(T-110) DA(N111):DT(T-111) DC(N112):DG(T-112) DG(N113):DC(T-113) DC(N114):DG(T-114) DG(N115):DC(T-115) DC(N116):DG(T-116) DT(N117):DA(T-117) DG(N118):DC(T-118) DT(N119):DA(T-119) DC(N120):DG(T-120) DC(N121):DG(T-121) DC(N122):DG(T-122) DC(N123):DG(T-123) DC(N124):DG(T-124) DG(N125):DC(T-125) DC(N126):DG(T-126) DG(N127):DC(T-127) DT(N128):DA(T-128) DT(N129):DA(T-129) DT(N130):DA(T-130) DT(N131):DA(T-131) DA(N132):DT(T-132) DA(N133):DT(T-133) DC(N134):DG(T-134) DC(N135):DG(T-135) DG(N136):DC(T-136) DC(N137):DG(T-137) DC(N138):DG(T-138) DA(N139):DT(T-139) DA(N140):DT(T-140) DG(N141):DC(T-141) DG(N142):DC(T-142) DG(N143):DC(T-143) DG(N144):DC(T-144) DA(N145):DT(T-145) DT(N146):DA(T-146) DT(N147):DA(T-147) DA(N148):DT(T-148) DC(N149):DG(T-149) DT(N150):DA(T-150) DC(N151):DG(T-151) DC(N152):DG(T-152) DC(N153):DG(T-153) DT(N154):DA(T-154) DA(N155):DT(T-155) DG(N156):DC(T-156) DT(N157):DA(T-157) DC(N158):DG(T-158) DT(N159):DA(T-159) DC(N160):DG(T-160) DC(N161):DG(T-161) DA(N162):DT(T-162) DG(N163):DC(T-163) DG(N164):DC(T-164) DC(N165):DG(T-165) DA(N166):DT(T-166) DC(N167):DG(T-167) DG(N168):DC(T-168) DT(N169):DA(T-169) DG(N170):DC(T-170) DT(N171):DA(T-171) DC(N172):DG(T-172) DA(N173):DT(T-173) DG(N174):DC(T-174) DA(N175):DT(T-175) DT(N176):DA(T-176) DA(N177):DT(T-177) DT(N178):DA(T-178) DA(N179):DT(T-179) DT(N180):DA(T-180) DA(N181):DT(T-181) DC(N182):DG(T-182) DA(N183):DT(T-183) DT(N184):DA(T-184) DC(N185):DG(T-185) DC(N186):DG(T-186) DG(N187):DC(T-187) DA(N188):DT(T-188) chaine ( 4) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >8bz1_R:Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=RNA POLYMERASE II CORE PRE-INITIATION COMPLEX WITH THE PROXIMAL +1 NUCLEOSOME (CPIC-NUC10W) organism=? DNA sequence DG(N-9):DC(T9) DA(N-8):DT(T8) DA(N-7):DT(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DG(N-3):DC(T3) DG(N-2):DC(T2) DG(N-1):DC(T1) DC(N0):DG(T0) DT(N1):DA(T-1) DA(N2):DT(T-2) DT(N3):DA(T-3) DA(N4):DT(T-4) DA(N5):DT(T-5) DA(N6):DT(T-6) DA(N7):DT(T-7) DG(N8):DC(T-8) DG(N9):DC(T-9) DG(N10):DC(T-10) DG(N11):DC(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DG(N14):DC(T-14) DG(N15):DC(T-15) DG(N16):DC(T-16) DG(N17):DC(T-17) DG(N18):DC(T-18) DC(N19):DG(T-19) DG(N20):DC(T-20) DC(N21):DG(T-21) DG(N22):DC(T-22) DT(N23):DA(T-23) DT(N24):DA(T-24) DC(N25):DG(T-25) DG(N26):DC(T-26) DT(N27):DA(T-27) DC(N28):DG(T-28) DC(N29):DG(T-29) DT(N30):DA(T-30) DC(N31):DG(T-31) DA(N32):DT(T-32) DC(N33):DG(T-33) DT(N34):DA(T-34) DC(N35):DG(T-35) DT(N36):DA(T-36) DC(N37):DG(T-37) DT(N38):DA(T-38) DT(N39):DA(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DG(N42):DC(T-42) DA(N43):DT(T-43) DT(N44):DA(T-44) DC(N45):DG(T-45) DG(N46):DC(T-46) DA(N47):DT(T-47) DG(N48):DC(T-48) DA(N49):DT(T-49) DA(N50):DT(T-50) DT(N51):DA(T-51) DC(N52):DG(T-52) DC(N53):DG(T-53) DC(N54):DG(T-54) DG(N55):DC(T-55) DG(N56):DC(T-56) DT(N57):DA(T-57) DG(N58):DC(T-58) DC(N59):DG(T-59) DC(N60):DG(T-60) DG(N61):DC(T-61) DA(N62):DT(T-62) DG(N63):DC(T-63) DG(N64):DC(T-64) DC(N65):DG(T-65) DC(N66):DG(T-66) DG(N67):DC(T-67) DC(N68):DG(T-68) DT(N69):DA(T-69) DC(N70):DG(T-70) DA(N71):DT(T-71) DA(N72):DT(T-72) DT(N73):DA(T-73) DT(N74):DA(T-74) DG(N75):DC(T-75) DG(N76):DC(T-76) DT(N77):DA(T-77) DC(N78):DG(T-78) DG(N79):DC(T-79) DT(N80):DA(T-80) DA(N81):DT(T-81) DG(N82):DC(T-82) DA(N83):DT(T-83) DC(N84):DG(T-84) DA(N85):DT(T-85) DG(N86):DC(T-86) DC(N87):DG(T-87) DT(N88):DA(T-88) DC(N89):DG(T-89) DT(N90):DA(T-90) DA(N91):DT(T-91) DG(N92):DC(T-92) DC(N93):DG(T-93) DA(N94):DT(T-94) DC(N95):DG(T-95) DC(N96):DG(T-96) DG(N97):DC(T-97) DC(N98):DG(T-98) DT(N99):DA(T-99) DT(N100):DA(T-100) DA(N101):DT(T-101) DA(N102):DT(T-102) DA(N103):DT(T-103) DC(N104):DG(T-104) DG(N105):DC(T-105) DC(N106):DG(T-106) DA(N107):DT(T-107) DC(N108):DG(T-108) DG(N109):DC(T-109) DT(N110):DA(T-110) DA(N111):DT(T-111) DC(N112):DG(T-112) DG(N113):DC(T-113) DC(N114):DG(T-114) DG(N115):DC(T-115) DC(N116):DG(T-116) DT(N117):DA(T-117) DG(N118):DC(T-118) DT(N119):DA(T-119) DC(N120):DG(T-120) DC(N121):DG(T-121) DC(N122):DG(T-122) DC(N123):DG(T-123) DC(N124):DG(T-124) DG(N125):DC(T-125) DC(N126):DG(T-126) DG(N127):DC(T-127) DT(N128):DA(T-128) DT(N129):DA(T-129) DT(N130):DA(T-130) DT(N131):DA(T-131) DA(N132):DT(T-132) DA(N133):DT(T-133) DC(N134):DG(T-134) DC(N135):DG(T-135) DG(N136):DC(T-136) DC(N137):DG(T-137) DC(N138):DG(T-138) DA(N139):DT(T-139) DA(N140):DT(T-140) DG(N141):DC(T-141) DG(N142):DC(T-142) DG(N143):DC(T-143) DG(N144):DC(T-144) DA(N145):DT(T-145) DT(N146):DA(T-146) DT(N147):DA(T-147) DA(N148):DT(T-148) DC(N149):DG(T-149) DT(N150):DA(T-150) DC(N151):DG(T-151) DC(N152):DG(T-152) DC(N153):DG(T-153) DT(N154):DA(T-154) DA(N155):DT(T-155) DG(N156):DC(T-156) DT(N157):DA(T-157) DC(N158):DG(T-158) DT(N159):DA(T-159) DC(N160):DG(T-160) DC(N161):DG(T-161) DA(N162):DT(T-162) DG(N163):DC(T-163) DG(N164):DC(T-164) DC(N165):DG(T-165) DA(N166):DT(T-166) DC(N167):DG(T-167) DG(N168):DC(T-168) DT(N169):DA(T-169) DG(N170):DC(T-170) DT(N171):DA(T-171) DC(N172):DG(T-172) DA(N173):DT(T-173) DG(N174):DC(T-174) DA(N175):DT(T-175) DT(N176):DA(T-176) DA(N177):DT(T-177) DT(N178):DA(T-178) DA(N179):DT(T-179) DT(N180):DA(T-180) DA(N181):DT(T-181) DC(N182):DG(T-182) DA(N183):DT(T-183) DT(N184):DA(T-184) DC(N185):DG(T-185) DC(N186):DG(T-186) DG(N187):DC(T-187) DA(N188):DT(T-188) chainR (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe >8c5s_AB:DNA/RNA_polymerases;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH 7-MER RNA, PPPGPGPUPAPAPAPU (IC7) organism=? DNA sequence DC(T10):DG(N136) DA(T11):DT(N135) DA(T12):DT(N134) DT(T13):DA(N133) DT(T14):DA(N132) DT(T15):DA(N131) DG(T16):DC(N130) DC(T17):DG(N129) DA(T18):DT(N128) DT(T19):DA(N127) DT(T20):DA(N126) DT(T21):DA(N125) DA(T22):DT(N124) DC(T23):DA(N123) DC(T24):DA(N122) DG(T25):DT(N121) DA(T26):DG(N120) DC(T27):DA(N119) DA(T28):DA(N118) DA(T29):DT(N117) DT(T30):DA(N116) DA(T31):DT(N115) DT(T32):DA(N114) DC(T33):DG(N113) DA(T34):DT(N112) DA(T35):DT(N111) DT(T36):DA(N110) DA(T37):DT(N109) chainB ( 17) TYR18 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASP101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55 0 29 0 0 0 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (335) GLN336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 chainA (141) ILE526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (220) TYR640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (222) ASN642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (224) SER644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 0 0 0 0 0 0 0 (225) LYS645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 (360) ARG780 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 (364) LEU784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (370) ALA790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (371) ASN791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (374) SER794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 (377) ARG797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (407) ARG827 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) TYR831 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (595) GLN1015 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (599) THR1019 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (602) TYR1022 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (604) VAL1024 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (605) THR1025 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (606) TYR1026 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (607) VAL1027 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (612) GLN1032 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (709) GLN1129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 2 0 0 0 0 0 (716) THR1136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (718) PHE1138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (731) ARG1151 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (739) PRO1159 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (743) HIS1163 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence inffeiynslptleekkafesalnifnqdrqkvlenrateaarerwkhdfeeakargdisieknlnvklwkwynemlplvkeeinhcrsllseklsdkkglnkvdtnrlgygpyltlidpgkmcvitilellklnstggvIegmrtaravisvgkaiemefrseqvlkkilwpqsirarigsvlismliqvakvsvqgvdpvtkakvhgeapafahgyqYhNgSKlgvlkihktlirqlngerliasvqpqllpmlvepkpwvnwrsggyhytqstllrtkdspeqvaylkaasdngdidrvydglnvlgrtpwtvnrkvfdvvsqvwnkgegfldipgaqdemvlppappknsdpsilRawkLqvktiANkfSsdRsnrcdtnykleiaraflgeklyfphnldfRgraYplsphfnhlgndmsrgllifwhgkklgpsglkwlkihlsnlfgfdklplkdrvafteshlqdikdsaenpltgdrwwttadkpwqalatcfelnevmkmdnpeefishqpvhqdgtcnglqhyaalggdvegatqvnlvpsdkpqdvyahvarlvqkrleiaaekgdenakilkdkitrkvvkQtvmTnvYgVTYVgatfQiakqlspifddrkesldfskyltkhvfsairelfhsahliqdwlgesakrisksirldvdeksfkngnkpdfmssviwttplglpivqpyreeskkQvetnlqTvFisdpfavnpvnaRrqkaglpPnfiHsldashmllsaaecgkqgldfasvhdsywthasdidtmnvvlreqfiklhevdlvlrlkeefdqryknyvkigklkrstdlaqkiirirkdlsrklgrsttladeiyfekkrqellnspliedrnvgekmvttvslfeditdldalelsgmsvllplrlpeippkgdfdvtvlrnsqyffs/svpipgikdisklkffYgfkylwnptvynkifdkldltktykhpeelkvldlypgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrDpYDWstysnlideerifvpevqssdhindkfltvanvtgegsEgLiMQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmdfvdmyQt >8c5s_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH 7-MER RNA, PPPGPGPUPAPAPAPU (IC7) organism=? DNA sequence DC(T10):DG(N136) DA(T11):DT(N135) DA(T12):DT(N134) DT(T13):DA(N133) DT(T14):DA(N132) DT(T15):DA(N131) DG(T16):DC(N130) DC(T17):DG(N129) DA(T18):DT(N128) DT(T19):DA(N127) DT(T20):DA(N126) DT(T21):DA(N125) DA(T22):DT(N124) DC(T23):DA(N123) DC(T24):DA(N122) DG(T25):DT(N121) DA(T26):DG(N120) DC(T27):DA(N119) DA(T28):DA(N118) DA(T29):DT(N117) DT(T30):DA(N116) DA(T31):DT(N115) DT(T32):DA(N114) DC(T33):DG(N113) DA(T34):DT(N112) DA(T35):DT(N111) DT(T36):DA(N110) DA(T37):DT(N109) chainB ( 17) TYR18 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASP101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55 0 29 0 0 0 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (335) GLN336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence svpipgikdisklkffYgfkylwnptvynkifdkldltktykhpeelkvldlypgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrDpYDWstysnlideerifvpevqssdhindkfltvanvtgegsEgLiMQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmdfvdmyQt >8c5u_AB:DNA/RNA_polymerases;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH 8-MER RNA, PPPGPGPUPAPAPAPUPG (IC8) organism=? DNA sequence DA(N106):DT(T41) DA(N107):DT(T40) DG(N108):DC(T39) DT(N109):DA(T38) DA(N110):DT(T37) DT(N111):DA(T36) DT(N112):DA(T35) DG(N113):DC(T34) DA(N114):DT(T33) DT(N115):DA(T32) DA(N116):DT(T31) DT(N117):DA(T30) DA(N118):DA(T29) DA(N119):DC(T28) DG(N120):DA(T27) DT(N121):DG(T26) DA(N122):DC(T25) DA(N123):DC(T24) DT(N124):DA(T23) DA(N125):DT(T22) DA(N126):DT(T21) DA(N127):DT(T20) DT(N128):DA(T19) DG(N129):DC(T18) DC(N130):DG(T17) DA(N131):DT(T16) DA(N132):DT(T15) DA(N133):DT(T14) DT(N134):DA(T13) DT(N135):DA(T12) DG(N136):DC(T11) DC(N137):DG(T10) chainB ( 17) TYR18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) LYS78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASP101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (135) ASN520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) ARG530 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) ALA532 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ILE536 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) GLN594 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) TYR640 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ASN642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) SER644 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) LYS645 0 0 0 0 0 0 0 0 0 3 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (375) SER798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (379) ASP802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (404) ARG827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (408) TYR831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (599) TYR1022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (601) VAL1024 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (602) THR1025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 (603) TYR1026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (604) VAL1027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (706) GLN1129 0 0 0 0 0 0 0 0 0 8 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (715) PHE1138 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (716) ILE1139 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (717) SER1140 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (728) ARG1151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 (740) HIS1163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 prot.sequence inffeiynslptleekkafesalnifnqdrqkvlenrateaarerwkhdfeeakargdisieknlnvklwkwynemlplvkeeinhcrsllseklsdkkglnkvdtnrlgygpyltlidpgkmcvitilellklNstgegmRtAravIsvgkaiemefrseqvlkkilwpQsirarigsvlismliqvakvsvqgvdpvtkakvhgeapafahgyqYhNgSKlgvlkihktlirqlngerliasvqpqllpmlvepkpwvnwrsggyhytqstllrtkdspeqvaylkaasdngdidrvydglnvlgrtpwtvnrkvfdvvsqvwnkgegfldipgaqdemvlppappknsdpsilrawklqvktiankfssdrSnrcDtnykleiaraflgeklyfphnldfRgraYplsphfnhlgndmsrgllifwhgkklgpsglkwlkihlsnlfgfdklplkdrvafteshlqdikdsaenpltgdrwwttadkpwqalatcfelnevmkmdnpeefishqpvhqdgtcnglqhyaalggdvegatqvnlvpsdkpqdvyahvarlvqkrleiaaekgdenakilkdkitrkvvkqtvmtnvYgVTYVgatfqiakqlspifddrkesldfskyltkhvfsairelfhsahliqdwlgesakrisksirldvdeksfkngnkpdfmssviwttplglpivqpyreeskkQvetnlqtvFISdpfavnpvnaRrqkaglppnfiHsldashmllsaaecgkqgldfasvhdsywthasdidtmnvvlreqfiklhevdlvlrlkeefdqryknyvkigklkrstdlaqkiirirkdlsrklgrsttladeiyfekkrqellnspliedrnvgekmvttvslfeditdldalegmsvllplrlpeippkgdfdvtvlrnsqyffs/svpipgikdisklkffYgfkylwnptvynkifdkldltktykhpeelkvldlypgvgiqsaifynkycprqyslleKrsslykflnakfegsplqilkrDpYDWstysnlideerifvpevqssdhindkfltvanvtgegSEgLiMQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmd >8c5u_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH 8-MER RNA, PPPGPGPUPAPAPAPUPG (IC8) organism=? DNA sequence DG(T10):DC(N137) DC(T11):DG(N136) DA(T12):DT(N135) DA(T13):DT(N134) DT(T14):DA(N133) DT(T15):DA(N132) DT(T16):DA(N131) DG(T17):DC(N130) DC(T18):DG(N129) DA(T19):DT(N128) DT(T20):DA(N127) DT(T21):DA(N126) DT(T22):DA(N125) DA(T23):DT(N124) DC(T24):DA(N123) DC(T25):DA(N122) DG(T26):DT(N121) DA(T27):DG(N120) DC(T28):DA(N119) DA(T29):DA(N118) DA(T30):DT(N117) DT(T31):DA(N116) DA(T32):DT(N115) DT(T33):DA(N114) DC(T34):DG(N113) DA(T35):DT(N112) DA(T36):DT(N111) DT(T37):DA(N110) DA(T38):DT(N109) DC(T39):DG(N108) DT(T40):DA(N107) DT(T41):DA(N106) chainB ( 17) TYR18 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) LYS78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASP101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) SER143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence svpipgikdisklkffYgfkylwnptvynkifdkldltktykhpeelkvldlypgvgiqsaifynkycprqyslleKrsslykflnakfegsplqilkrDpYDWstysnlideerifvpevqssdhindkfltvanvtgegSEgLiMQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmd >8c7s_A:"Winged_helix"_DNA-binding_domain; title=TRANSCRIPTIONAL PLEIOTROPIC REPRESSOR CODY FROM STAPHYLOCOCCUS AUREUS IN COMPLEX WITH ILE, GTP, AND A 30-BP DNA FRAGMENT ENCOMPASSING TWO OVERLAPPING BINDING SITES organism=Staphylococcus aureus (strain USA300) / Staphylococcus aureus (strain USA300) DNA sequence DC(M1) DT(M2) DA(M3) DA(M4) DA(M5) DT(M6) DT(M7) DT(M8) DT(M9) DC(M10) DT(M11) DG(M12) DA(M13) DA(M14) DA(M15) DA(M16) DT(M17) DT(M18) DC(M19) DT(M20) DG(M21) DA(M22) DA(M23) DA(M24) DA(M25) DT(M26) DT(M27) DA(M28) DT(M29) DC(M30) chainA (214) ARG214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) SER215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 (218) VAL218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 (237) MET237 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence msllsktrelntllqkhkgiavdfkdvaqtissvtvtnvfivsrrgkilgsslnellksqriiqmleerhipseyterlmevkqtesnididnvltvfppenrelfidsrttifpilgggerlgtlvlgrvhddfnendlvlgeyaatvigmeilrekhsevekeardkaaitmainslsysekeaiehifeelggteglliaskvadrvgitRSviVnalrklesagviesrslgMkgtfikvkkekfldeleks >8c7s_AB:"Winged_helix"_DNA-binding_domain; title=TRANSCRIPTIONAL PLEIOTROPIC REPRESSOR CODY FROM STAPHYLOCOCCUS AUREUS IN COMPLEX WITH ILE, GTP, AND A 30-BP DNA FRAGMENT ENCOMPASSING TWO OVERLAPPING BINDING SITES organism=Staphylococcus aureus (strain USA300) / Staphylococcus aureus (strain USA300) / Staphylococcus aureus (strain USA300) / Staphylococcus aureus (strain USA300) DNA sequence DC(M1) DT(M2) DA(M3) DA(M4) DA(M5) DT(M6) DT(M7) DT(M8) DT(M9) DC(M10) DT(M11) DG(M12) DA(M13) DA(M14) DA(M15) DA(M16) DT(M17) DT(M18) DC(M19) DT(M20) DG(M21) DA(M22) DA(M23) DA(M24) DA(M25) DT(M26) DT(M27) DA(M28) DT(M29) DC(M30) chainA (214) ARG214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) SER215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 (218) VAL218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 (237) MET237 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (213) THR213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (215) SER215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 (216) VAL216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (237) MET237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 prot.sequence msllsktrelntllqkhkgiavdfkdvaqtissvtvtnvfivsrrgkilgsslnellksqriiqmleerhipseyterlmevkqtesnididnvltvfppenrelfidsrttifpilgggerlgtlvlgrvhddfnendlvlgeyaatvigmeilrekhsevekeardkaaitmainslsysekeaiehifeelggteglliaskvadrvgitRSviVnalrklesagviesrslgMkgtfikvkkekfldeleks/msllsktrelntllqkhkgiavdfkdvaqtissvtvtnvfivsrrgkilgsslnellksqriiqmleerhipseyterlmevkqtesnididnvltvfppenrelfidsrttifpilgggerlgtlvlgrvhddfnendlvlgeyaatvigmeilrekhsevekeardkaaitmainslsysekeaiehifeelggteglliaskvadrvgiTrSVivnalrklesagviesrslgMkgtfikvkkekfldeleks >8c7u_A:"Winged_helix"_DNA-binding_domain;GAF_domain-like; title=TRANSCRIPTIONAL PLEIOTROPIC REPRESSOR CODY FROM ENTEROCOCCUS FAECALIS IN COMPLEX WITH LEU AND A 30-BP DNA FRAGMENT ENCOMPASSING TWO OVERLAPPING BINDING SITES organism=Enterococcus faecalis (strain ATCC 700802 / V583) / Enterococcus faecalis (strain ATCC 700802 / V583) DNA sequence DG(F1):DC(E30) DA(F2):DT(E29) DT(F3):DA(E28) DA(F4):DT(E27) DA(F5):DT(E26) DT(F6):DA(E25) DT(F7):DA(E24) DT(F8):DA(E23) DT(F9):DA(E22) DC(F10):DG(E21) DA(F11):DT(E20) DG(F12):DC(E19) DA(F13):DT(E18) DA(F14):DT(E17) DT(F15):DA(E16) DT(F16):DA(E15) DT(F17):DA(E14) DT(F18):DA(E13) DC(F19):DG(E12) DA(F20):DT(E11) DG(F21):DC(E10) DA(F22):DT(E9) DA(F23):DT(E8) DA(F24):DT(E7) DA(F25):DT(E6) DT(F26):DA(E5) DT(F27):DA(E4) DT(F28):DA(E3) DA(F29):DT(E2) chainA (210) SER209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) THR218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 (220) ARG219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 (221) SER220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 4 0 0 0 0 0 0 0 0 0 (222) VAL221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (224) VAL223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 (243) MET242 0 0 0 0 0 0 0 0 0 0 0 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence amatllektrqvnellqknnlfdvqaelpynkmamilgdilesnayiisssgdllgytekldvnnariknmfkekkfpqgyteavdmlkvteanipidsdltafpfesrelypfglttivplygagkrlgtiilarveksfneddlvlaeysatvvgmqilyhqsrtieaevrsatavqmaintlsyselkavhaifealdgeegrltaSsiadeigiTRSViVnalrklesagiiesrslgMkgtylkvlnqqfikelek >8c7u_ABCD:"Winged_helix"_DNA-binding_domain;GAF_domain-like; title=TRANSCRIPTIONAL PLEIOTROPIC REPRESSOR CODY FROM ENTEROCOCCUS FAECALIS IN COMPLEX WITH LEU AND A 30-BP DNA FRAGMENT ENCOMPASSING TWO OVERLAPPING BINDING SITES organism=Enterococcus faecalis (strain ATCC 700802 / V583) / Enterococcus faecalis (strain ATCC 700802 / V583) / Enterococcus faecalis (strain ATCC 700802 / V583) / Enterococcus faecalis (strain ATCC 700802 / V583) / Enterococcus faecalis (strain ATCC 700802 / V583) / Enterococcus faecalis (strain ATCC 700802 / V583) / Enterococcus faecalis (strain ATCC 700802 / V583) / Enterococcus faecalis (strain ATCC 700802 / V583) DNA sequence DG(F1):DC(E30) DA(F2):DT(E29) DT(F3):DA(E28) DA(F4):DT(E27) DA(F5):DT(E26) DT(F6):DA(E25) DT(F7):DA(E24) DT(F8):DA(E23) DT(F9):DA(E22) DC(F10):DG(E21) DA(F11):DT(E20) DG(F12):DC(E19) DA(F13):DT(E18) DA(F14):DT(E17) DT(F15):DA(E16) DT(F16):DA(E15) DT(F17):DA(E14) DT(F18):DA(E13) DC(F19):DG(E12) DA(F20):DT(E11) DG(F21):DC(E10) DA(F22):DT(E9) DA(F23):DT(E8) DA(F24):DT(E7) DA(F25):DT(E6) DT(F26):DA(E5) DT(F27):DA(E4) DT(F28):DA(E3) DA(F29):DT(E2) chainA (210) SER209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) THR218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 (220) ARG219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 (221) SER220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 4 0 0 0 0 0 0 0 0 0 (222) VAL221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (224) VAL223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 (243) MET242 0 0 0 0 0 0 0 0 0 0 0 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (219) THR218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 (220) ARG219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (221) SER220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 4 0 0 0 0 0 0 0 (224) VAL223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 (243) MET242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 6 0 chainC (212) THR218 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (213) ARG219 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) SER220 0 0 0 0 0 0 0 0 2 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) VAL221 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) VAL223 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) MET242 0 0 5 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (220) THR218 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) ARG219 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) SER220 0 0 0 0 0 0 0 0 0 0 2 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) VAL223 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) MET242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 5 0 0 0 0 0 0 0 0 0 0 prot.sequence amatllektrqvnellqknnlfdvqaelpynkmamilgdilesnayiisssgdllgytekldvnnariknmfkekkfpqgyteavdmlkvteanipidsdltafpfesrelypfglttivplygagkrlgtiilarveksfneddlvlaeysatvvgmqilyhqsrtieaevrsatavqmaintlsyselkavhaifealdgeegrltaSsiadeigiTRSViVnalrklesagiiesrslgMkgtylkvlnqqfikelek/amatllektrqvnellqknnlfdvqaelpynkmamilgdilesnayiisssgdllgytekldvnnariknmfkekkfpqgyteavdmlkvteanipidsdltafpfesrelypfglttivplygagkrlgtiilarveksfneddlvlaeysatvvgmqilyhqsrtieaevrsatavqmaintlsyselkavhaifealdgeegrltassiadeigiTRSviVnalrklesagiiesrslgMkgtylkvlnqqfikelek/matllektrqvnellqkqaelpynkmamilgdilesnayiisssgdllgytekldvnnariknmfkekkfpqgyteavdmlkvteanipidsdltafpfesrelypfglttivplygagkrlgtiilarveksfneddlvlaeysatvvgmqilyhqsrtieaevrsatavqmaintlsyselkavhaifealdgeegrltassiadeigiTRSViVnalrklesagiiesrslgMkgtylkvlnqqfikelek/gamatllektrqvnellqknnlfdvqaelpynkmamilgdilesnayiisssgdllgytekldvnnariknmfkekkfpqgyteavdmlkvteanipidsdltafpfesrelypfglttivplygagkrlgtiilarveksfneddlvlaeysatvvgmqilyhqsrtieaevrsatavqmaintlsyselkavhaifealdgeegrltassiadeigiTRSviVnalrklesagiiesrslgMkgtylkvlnqqfikelek >8cdn_A:p53-like_transcription_factors; title=CRYSTAL STRUCTURE OF HUMAN BRACHYURY IN COMPLEX WITH A SINGLE T BOX BINDING ELEMENT DNA organism=Homo sapiens DNA sequence DA(D5):DT(C10) DG(D6):DC(C9) DG(D7):DC(C8) DC(D8):DG(C7) DT(D9):DA(C6) DC(D10):DG(C5) DA(D11):DT(C4) DC(D12):DG(C3) DA(D13):DT(C2) DC(D14):DG(C1) DC(D15):DG(C0) DT(D16):DA(C-1) chainA ( 29) ARG69 0 0 0 0 0 0 0 5 7 0 0 0 (156) THR196 0 0 0 2 2 0 0 0 0 0 0 0 (173) PHE213 0 0 0 0 0 0 0 0 0 2 2 1 (177) PHE217 0 0 0 0 0 0 0 7 4 0 0 0 prot.sequence elrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpggkpepqapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTayqneeitalkikynpFakaFldak >8cef_CDJ:Glucocorticoid_receptor-like_DNA-binding_domain; title=ASYMMETRIC DIMERIZATION IN A TRANSCRIPTION FACTOR SUPERFAMILY IS PROMOTED BY ALLOSTERIC INTERACTIONS WITH DNA organism=Mus musculus DNA sequence DT(A2):DA(B26) DG(A3):DC(B25) DT(A4):DA(B24) DC(A5):DG(B23) DA(A6):DT(B22) DA(A7):DT(B21) DG(A8):DC(B20) DG(A9):DC(B19) DT(A10):DA(B18) DC(A11):DG(B17) DA(A12):DT(B16) DC(A13):DG(B15) DC(A14):DG(B14) DG(A15):DC(B13) DT(A16):DA(B12) DG(A17):DC(B11) DA(A18):DT(B10) DC(A19):DG(B9) DC(A20):DG(B8) DT(A21):DA(B7) DT(A22):DA(B6) DT(A23):DA(B5) DA(A24):DT(B4) DC(A25):DG(B3) DG(A26):DC(B2) chainC ( 24) GLU97 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LYS100 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ALA101 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) LYS104 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG105 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ARG155 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG158 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 23) GLU97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 ( 26) LYS100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 ( 27) ALA101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 ( 30) LYS104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 ( 31) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 6 0 0 0 0 0 0 0 0 0 ( 81) ARG155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 ( 84) ARG158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 1 0 chainJ ( 23) GLU97 0 0 0 0 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS100 0 0 0 0 0 0 0 0 0 0 0 1 8 6 0 0 0 0 0 0 0 0 0 0 0 ( 27) ALA101 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LYS104 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG105 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 8 0 0 0 0 0 0 0 0 prot.sequence lpkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvRggR/pkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvRggR/pkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvrggRqkyk >8cef_GHK:Glucocorticoid_receptor-like_DNA-binding_domain; title=ASYMMETRIC DIMERIZATION IN A TRANSCRIPTION FACTOR SUPERFAMILY IS PROMOTED BY ALLOSTERIC INTERACTIONS WITH DNA organism=Mus musculus DNA sequence DC(F2):DG(E26) DG(F3):DC(E25) DT(F4):DA(E24) DA(F5):DT(E23) DA(F6):DT(E22) DA(F7):DT(E21) DG(F8):DC(E20) DG(F9):DC(E19) DT(F10):DA(E18) DC(F11):DG(E17) DA(F12):DT(E16) DC(F13):DG(E15) DG(F14):DC(E14) DG(F15):DC(E13) DT(F16):DA(E12) DG(F17):DC(E11) DA(F18):DT(E10) DC(F19):DG(E9) DC(F20):DG(E8) DT(F21):DA(E7) DT(F22):DA(E6) DG(F23):DC(E5) DA(F24):DT(E4) DC(F25):DG(E3) DA(F26):DT(E2) chainG ( 22) GLU97 0 0 0 0 0 0 1 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS100 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA101 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS104 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG105 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) ARG155 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 23) GLU97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 1 0 0 0 0 0 0 ( 26) LYS100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 ( 27) ALA101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 30) LYS104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 ( 31) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 ( 81) ARG155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 ( 84) ARG158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 1 0 chainK ( 24) GLU97 0 0 0 0 0 0 0 0 0 0 0 0 2 7 4 0 0 0 0 0 0 0 0 0 0 ( 27) LYS100 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ALA101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 31) LYS104 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 82) ARG155 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG158 0 0 0 0 0 0 0 0 9 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvR/pkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvRggRqky/lpkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvRggRqky >8cef_H:Glucocorticoid_receptor-like_DNA-binding_domain; title=ASYMMETRIC DIMERIZATION IN A TRANSCRIPTION FACTOR SUPERFAMILY IS PROMOTED BY ALLOSTERIC INTERACTIONS WITH DNA organism=Mus musculus DNA sequence DT(E2):DA(F26) DG(E3):DC(F25) DT(E4):DA(F24) DC(E5):DG(F23) DA(E6):DT(F22) DA(E7):DT(F21) DG(E8):DC(F20) DG(E9):DC(F19) DT(E10):DA(F18) DC(E11):DG(F17) DA(E12):DT(F16) DC(E13):DG(F15) DC(E14):DG(F14) DG(E15):DC(F13) DT(E16):DA(F12) DG(E17):DC(F11) DA(E18):DT(F10) DC(E19):DG(F9) DC(E20):DG(F8) DT(E21):DA(F7) DT(E22):DA(F6) DT(E23):DA(F5) DA(E24):DT(F4) DC(E25):DG(F3) DG(E26):DC(F2) chainH ( 23) GLU97 0 0 0 0 0 0 1 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) LYS100 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) ALA101 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LYS104 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ARG105 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG155 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG158 0 1 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pkrlclvcgdvasgyhygvascEacKAffKRtiqgsieyscpasneceitkrrrkacqacrftkclrvgmlkegvrldrvRggRqky >8ceo_r:Histone-fold; title=YEAST RNA POLYMERASE II TRANSCRIPTION PRE-INITIATION COMPLEX WITH CORE MEDIATOR AND THE +1 NUCLEOSOME organism=? DNA sequence DA(T-135):DT(N135) DT(T-134):DA(N134) DC(T-133):DG(N133) DG(T-132):DC(N132) DA(T-131):DT(N131) DT(T-130):DA(N130) DG(T-129):DC(N129) DT(T-128):DA(N128) DA(T-127):DT(N127) DT(T-126):DA(N126) DA(T-125):DT(N125) DT(T-124):DA(N124) DA(T-123):DT(N123) DT(T-122):DA(N122) DC(T-121):DG(N121) DT(T-120):DA(N120) DG(T-119):DC(N119) DA(T-118):DT(N118) DC(T-117):DG(N117) DA(T-116):DT(N116) DC(T-115):DG(N115) DG(T-114):DC(N114) DT(T-113):DA(N113) DG(T-112):DC(N112) DC(T-111):DG(N111) DC(T-110):DG(N110) DT(T-109):DA(N109) DG(T-108):DC(N108) DG(T-107):DC(N107) DA(T-106):DT(N106) DG(T-105):DC(N105) DA(T-104):DT(N104) DC(T-103):DG(N103) DT(T-102):DA(N102) DA(T-101):DT(N101) DG(T-100):DC(N100) DG(T-99):DC(N99) DG(T-98):DC(N98) DA(T-97):DT(N97) DG(T-96):DC(N96) DT(T-95):DA(N95) DA(T-94):DT(N94) DA(T-93):DT(N93) DT(T-92):DA(N92) DC(T-91):DG(N91) DC(T-90):DG(N90) DC(T-89):DG(N89) DC(T-88):DG(N88) DT(T-87):DA(N87) DT(T-86):DA(N86) DG(T-85):DC(N85) DG(T-84):DC(N84) DC(T-83):DG(N83) DG(T-82):DC(N82) DG(T-81):DC(N81) DT(T-80):DA(N80) DT(T-79):DA(N79) DA(T-78):DT(N78) DA(T-77):DT(N77) DA(T-76):DT(N76) DA(T-75):DT(N75) DC(T-74):DG(N74) DG(T-73):DC(N73) DC(T-72):DG(N72) DG(T-71):DC(N71) DG(T-70):DC(N70) DG(T-69):DC(N69) DG(T-68):DC(N68) DG(T-67):DC(N67) DA(T-66):DT(N66) DC(T-65):DG(N65) DA(T-64):DT(N64) DG(T-63):DC(N63) DC(T-62):DG(N62) DG(T-61):DC(N61) DC(T-60):DG(N60) DG(T-59):DC(N59) DT(T-58):DA(N58) DA(T-57):DT(N57) DC(T-56):DG(N56) DG(T-55):DC(N55) DT(T-54):DA(N54) DG(T-53):DC(N53) DC(T-52):DG(N52) DG(T-51):DC(N51) DT(T-50):DA(N50) DT(T-49):DA(N49) DT(T-48):DA(N48) DA(T-47):DT(N47) DA(T-46):DT(N46) DG(T-45):DC(N45) DC(T-44):DG(N44) DG(T-43):DC(N43) DG(T-42):DC(N42) DT(T-41):DA(N41) DG(T-40):DC(N40) DC(T-39):DG(N39) DT(T-38):DA(N38) DA(T-37):DT(N37) DG(T-36):DC(N36) DA(T-35):DT(N35) DG(T-34):DC(N34) DC(T-33):DG(N33) DT(T-32):DA(N32) DG(T-31):DC(N31) DT(T-30):DA(N30) DC(T-29):DG(N29) DT(T-28):DA(N28) DA(T-27):DT(N27) DC(T-26):DG(N26) DG(T-25):DC(N25) DA(T-24):DT(N24) DC(T-23):DG(N23) DC(T-22):DG(N22) DA(T-21):DT(N21) DA(T-20):DT(N20) DC(T-19):DG(N19) DA(T-18):DT(N18) DC(T-17):DG(N17) DA(T-16):DT(N16) DG(T-15):DC(N15) DC(T-14):DG(N14) DG(T-13):DC(N13) DC(T-12):DG(N12) DA(T-11):DT(N11) DG(T-10):DC(N10) DA(T-9):DT(N9) DA(T-8):DT(N8) DG(T-7):DC(N7) DA(T-6):DT(N6) DG(T-5):DC(N5) DC(T-4):DG(N4) DT(T-3):DA(N3) DA(T-2):DT(N2) DT(T-1):DA(N1) DG(T0):DC(N0) DA(T1):DT(N-1) DT(T2):DA(N-2) DA(T3):DT(N-3) DT(T4):DA(N-4) DT(T5):DA(N-5) DT(T6):DA(N-6) DT(T7):DA(N-7) DT(T8):DA(N-8) DA(T9):DT(N-9) DT(T10):DA(N-10) DG(T11):DC(N-11) DT(T12):DA(N-12) DA(T13):DT(N-13) DT(T14):DA(N-14) DG(T15):DC(N-15) DT(T16):DA(N-16) DA(T17):DT(N-17) DC(T18):DG(N-18) DA(T19):DT(N-19) DA(T20):DT(N-20) DC(T21):DG(N-21) DA(T22):DT(N-22) DC(T23):DG(N-23) DA(T24):DT(N-24) DC(T25):DG(N-25) DA(T26):DT(N-26) DT(T27):DA(N-27) DC(T28):DG(N-28) DG(T29):DC(N-29) DG(T30):DC(N-30) DA(T31):DT(N-31) DG(T32):DC(N-32) DG(T33):DC(N-33) DT(T34):DA(N-34) DG(T35):DC(N-35) DA(T36):DT(N-36) DA(T37):DT(N-37) DT(T38):DA(N-38) DC(T39):DG(N-39) DG(T40):DC(N-40) DA(T41):DT(N-41) DA(T42):DT(N-42) DC(T43):DG(N-43) DG(T44):DC(N-44) DT(T45):DA(N-45) DT(T46):DA(N-46) DC(T47):DG(N-47) DC(T48):DG(N-48) DA(T49):DT(N-49) DT(T50):DA(N-50) DA(T51):DT(N-51) DG(T52):DC(N-52) DC(T53):DG(N-53) DT(T54):DA(N-54) DA(T55):DT(N-55) DT(T56):DA(N-56) DT(T57):DA(N-57) DA(T58):DT(N-58) DT(T59):DA(N-59) DA(T60):DT(N-60) DT(T61):DA(N-61) DA(T62):DT(N-62) DC(T63):DG(N-63) DA(T64):DT(N-64) DC(T65):DG(N-65) DA(T66):DT(N-66) DG(T67):DC(N-67) DC(T68):DG(N-68) DG(T69):DC(N-69) DT(T70):DA(N-70) DG(T71):DC(N-71) DC(T72):DG(N-72) DT(T73):DA(N-73) chainr ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger >8cli_A: title=TFIIIC TAUB-DNA MONOMER organism=? DNA sequence DA(D2):DT(E73) DA(D3):DT(E72) DA(D4):DT(E71) DG(D5):DC(E70) DG(D6):DC(E69) DT(D7):DA(E68) DT(D8):DA(E67) DG(D9):DC(E66) DT(D10):DA(E65) DG(D11):DC(E64) DG(D12):DC(E63) DG(D13):DC(E62) DT(D14):DA(E61) DT(D15):DA(E60) DC(D16):DG(E59) DG(D17):DC(E58) DA(D18):DT(E57) DG(D19):DC(E56) DT(D20):DA(E55) DC(D21):DG(E54) DC(D22):DG(E53) DC(D23):DG(E52) DA(D24):DT(E51) DC(D25):DG(E50) DC(D26):DG(E49) DA(D27):DT(E48) DG(D28):DC(E47) DA(D29):DT(E46) DG(D30):DC(E45) DT(D31):DA(E44) DC(D32):DG(E43) DG(D33):DC(E42) DC(D34):DG(E41) DT(D35):DA(E40) DT(D36):DA(E39) chainA (206) ALA206 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) HIS210 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) TYR211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) GLN295 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (367) LEU398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ARG405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 12 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) GLN423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (481) CYS655 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (483) LYS657 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (487) ARG661 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdaleslldevalegldglclpalwsrletrvppfplplepctqeflwralathpgisfyeeprerpdlqlqdryeeidletgilesrrdpvaledvypihmilenkdgiqgscryfkerknitndirtkslqprctmveafdrwgkkliivasqamryraligqegdpdlklpdfsycilerlgrsrwqgelqrdlhttafkvdAgklHYhrkilnknglitmqshvirlptgaqqhsillllnrfhvdrrskydilmeklsvmlstrtnhietlgklreelglcertfkrlyQymlnaglakvvslrlqeihvmvrclkllktvppvdivferdmltqtydlierrgtkgisqaeirvamnvgkLeaRmlcRllqrfkvvkgfmedegRQrttkyiscvfaeesdlsrqyqrekarsellttvslaavieevretyrllkrrnliieavtnlrlieslftiqkmimdqekqegvstkcCkKsivRlvrnlseegllrlyrttviqdgikkkvdlvvhpsmdqndplvrsaieqvrfrisn >8cli_AC:WD40_repeat-like; title=TFIIIC TAUB-DNA MONOMER organism=? DNA sequence DA(D2):DT(E73) DA(D3):DT(E72) DA(D4):DT(E71) DG(D5):DC(E70) DG(D6):DC(E69) DT(D7):DA(E68) DT(D8):DA(E67) DG(D9):DC(E66) DT(D10):DA(E65) DG(D11):DC(E64) DG(D12):DC(E63) DG(D13):DC(E62) DT(D14):DA(E61) DT(D15):DA(E60) DC(D16):DG(E59) DG(D17):DC(E58) DA(D18):DT(E57) DG(D19):DC(E56) DT(D20):DA(E55) DC(D21):DG(E54) DC(D22):DG(E53) DC(D23):DG(E52) DA(D24):DT(E51) DC(D25):DG(E50) DC(D26):DG(E49) DA(D27):DT(E48) DG(D28):DC(E47) DA(D29):DT(E46) DG(D30):DC(E45) DT(D31):DA(E44) DC(D32):DG(E43) DG(D33):DC(E42) DC(D34):DG(E41) DT(D35):DA(E40) DT(D36):DA(E39) chainA (206) ALA206 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) HIS210 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) TYR211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) GLN295 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (367) LEU398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ARG405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 12 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) GLN423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (481) CYS655 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (483) LYS657 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (487) ARG661 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (454) ASN743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mdaleslldevalegldglclpalwsrletrvppfplplepctqeflwralathpgisfyeeprerpdlqlqdryeeidletgilesrrdpvaledvypihmilenkdgiqgscryfkerknitndirtkslqprctmveafdrwgkkliivasqamryraligqegdpdlklpdfsycilerlgrsrwqgelqrdlhttafkvdAgklHYhrkilnknglitmqshvirlptgaqqhsillllnrfhvdrrskydilmeklsvmlstrtnhietlgklreelglcertfkrlyQymlnaglakvvslrlqeihvmvrclkllktvppvdivferdmltqtydlierrgtkgisqaeirvamnvgkLeaRmlcRllqrfkvvkgfmedegRQrttkyiscvfaeesdlsrqyqrekarsellttvslaavieevretyrllkrrnliieavtnlrlieslftiqkmimdqekqegvstkcCkKsivRlvrnlseegllrlyrttviqdgikkkvdlvvhpsmdqndplvrsaieqvrfrisn/hcrgmapnglpnhimapvwkclhltkdfreqkhsywefaewiplawkwhllseleaapylpqeeksplfsvqreglpedgtlyrinrfssitahperwdvsfftggplwaldwcpvpegagasqyvalfsspdmnethplsqlhsgpgllqlwglgtlqqescpgnrahfvygiacdngciwdlkfcpsgawelpgtprkapllprlgllalacsdgkvllfslphpeallaqqppdavkpaiykvqcvatlqvgsmqatdpsecgqclslawmptrphqhlaagyyngmvvfwnlptnsplqrirlsdgslklypfqcflahdqavrtlqwckanshflvsagsdrkikfwdlrrpyepinsikrflstelawllpyngvtvaqdncyasyglcgihyidagylgfkayftaprkgtvwslsgsdwlgtiaagdisgeliaailpdmalnpiNvkrpverrfpiykadlipyrtytetvnhhyllfqdtdlgsfhdllrrepmlrmqegeghsqlcldrlqleaihkvrfspnldsygwlvsggqsglvrihfvrglasplghrmqlesrahfnamfq >8cli_C:WD40_repeat-like; title=TFIIIC TAUB-DNA MONOMER organism=? DNA sequence DA(D2):DT(E73) DA(D3):DT(E72) DA(D4):DT(E71) DG(D5):DC(E70) DG(D6):DC(E69) DT(D7):DA(E68) DT(D8):DA(E67) DG(D9):DC(E66) DT(D10):DA(E65) DG(D11):DC(E64) DG(D12):DC(E63) DG(D13):DC(E62) DT(D14):DA(E61) DT(D15):DA(E60) DC(D16):DG(E59) DG(D17):DC(E58) DA(D18):DT(E57) DG(D19):DC(E56) DT(D20):DA(E55) DC(D21):DG(E54) DC(D22):DG(E53) DC(D23):DG(E52) DA(D24):DT(E51) DC(D25):DG(E50) DC(D26):DG(E49) DA(D27):DT(E48) DG(D28):DC(E47) DA(D29):DT(E46) DG(D30):DC(E45) DT(D31):DA(E44) DC(D32):DG(E43) DG(D33):DC(E42) DC(D34):DG(E41) DT(D35):DA(E40) DT(D36):DA(E39) chainC (454) ASN743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence hcrgmapnglpnhimapvwkclhltkdfreqkhsywefaewiplawkwhllseleaapylpqeeksplfsvqreglpedgtlyrinrfssitahperwdvsfftggplwaldwcpvpegagasqyvalfsspdmnethplsqlhsgpgllqlwglgtlqqescpgnrahfvygiacdngciwdlkfcpsgawelpgtprkapllprlgllalacsdgkvllfslphpeallaqqppdavkpaiykvqcvatlqvgsmqatdpsecgqclslawmptrphqhlaagyyngmvvfwnlptnsplqrirlsdgslklypfqcflahdqavrtlqwckanshflvsagsdrkikfwdlrrpyepinsikrflstelawllpyngvtvaqdncyasyglcgihyidagylgfkayftaprkgtvwslsgsdwlgtiaagdisgeliaailpdmalnpiNvkrpverrfpiykadlipyrtytetvnhhyllfqdtdlgsfhdllrrepmlrmqegeghsqlcldrlqleaihkvrfspnldsygwlvsggqsglvrihfvrglasplghrmqlesrahfnamfq >8clj_AC:WD40_repeat-like; title=TFIIIC TAUB-DNA DIMER organism=? DNA sequence DA(D2):DT(E73) DA(D3):DT(E72) DA(D4):DT(E71) DG(D5):DC(E70) DG(D6):DC(E69) DT(D7):DA(E68) DT(D8):DA(E67) DG(D9):DC(E66) DT(D10):DA(E65) DG(D11):DC(E64) DG(D12):DC(E63) DG(D13):DC(E62) DT(D14):DA(E61) DT(D15):DA(E60) DC(D16):DG(E59) DG(D17):DC(E58) DA(D18):DT(E57) DG(D19):DC(E56) DT(D20):DA(E55) DC(D21):DG(E54) DC(D22):DG(E53) DC(D23):DG(E52) DA(D24):DT(E51) DC(D25):DG(E50) DC(D26):DG(E49) DA(D27):DT(E48) DG(D28):DC(E47) DA(D29):DT(E46) DG(D30):DC(E45) DT(D31):DA(E44) DC(D32):DG(E43) DG(D33):DC(E42) DC(D34):DG(E41) DT(D35):DA(E40) DT(D36):DA(E39) chainA (206) ALA206 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) HIS210 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) TYR211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) GLN237 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (367) LEU398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ARG405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 12 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) GLN423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (481) CYS655 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (483) LYS657 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (487) ARG661 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (454) ASN743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence mdaleslldevalegldglclpalwsrletrvppfplplepctqeflwralathpgisfyeeprerpdlqlqdryeeidletgilesrrdpvaledvypihmilenkdgiqgscryfkerknitndirtkslqprctmveafdrwgkkliivasqamryraligqegdpdlklpdfsycilerlgrsrwqgelqrdlhttafkvdAgklHYhrkilnknglitmqshvirlptgaqQhsillllnrfhvdrrskydilmeklsvmlstrtnhietlgklreelglcertfkrlyqymlnaglakvvslrlqeihvmvrclkllktvppvdivferdmltqtydlierrgtkgisqaeirvamnvgkLeaRmlcRllqrfkvvkgfmedegRQrttkyiscvfaeesdlsrqyqrekarsellttvslaavieevretyrllkrrnliieavtnlrlieslftiqkmimdqekqegvstkcCkKsivRlvrnlseegllrlyrttviqdgikkkvdlvvhpsmdqndplvrsaieqvrfrisn/hcrgmapnglpnhimapvwkclhltkdfreqkhsywefaewiplawkwhllseleaapylpqeeksplfsvqreglpedgtlyrinrfssitahperwdvsfftggplwaldwcpvpegagasqyvalfsspdmnethplsqlhsgpgllqlwglgtlqqescpgnrahfvygiacdngciwdlkfcpsgawelpgtprkapllprlgllalacsdgkvllfslphpeallaqqppdavkpaiykvqcvatlqvgsmqatdpsecgqclslawmptrphqhlaagyyngmvvfwnlptnsplqrirlsdgslklypfqcflahdqavrtlqwckanshflvsagsdrkikfwdlrrpyepinsikrflstelawllpyngvtvaqdncyasyglcgihyidagylgfkayftaprkgtvwslsgsdwlgtiaagdisgeliaailpdmalnpiNvkrpverrfpiykadlipyrtytetvnhhyllfqdtdlgsfhdllrrepmlrmqegeghsqlcldrlqleaihkvrfspnldsygwlvsggqsglvrihfvrglasplghrmqlesrahfnamfq >8clj_FH:WD40_repeat-like; title=TFIIIC TAUB-DNA DIMER organism=? DNA sequence DA(J39):DT(I36) DA(J40):DT(I35) DG(J41):DC(I34) DC(J42):DG(I33) DG(J43):DC(I32) DA(J44):DT(I31) DC(J45):DG(I30) DT(J46):DA(I29) DC(J47):DG(I28) DT(J48):DA(I27) DG(J49):DC(I26) DG(J50):DC(I25) DT(J51):DA(I24) DG(J52):DC(I23) DG(J53):DC(I22) DG(J54):DC(I21) DA(J55):DT(I20) DC(J56):DG(I19) DT(J57):DA(I18) DC(J58):DG(I17) DG(J59):DC(I16) DA(J60):DT(I15) DA(J61):DT(I14) DC(J62):DG(I13) DC(J63):DG(I12) DC(J64):DG(I11) DA(J65):DT(I10) DC(J66):DG(I9) DA(J67):DT(I8) DA(J68):DT(I7) DC(J69):DG(I6) DC(J70):DG(I5) DT(J71):DA(I4) DT(J72):DA(I3) DT(J73):DA(I2) chainF (206) ALA206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (210) HIS210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) TYR211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) GLN237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (295) GLN295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (367) LEU398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (374) ARG405 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 12 0 0 0 0 0 0 0 0 0 0 0 0 (392) GLN423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (481) CYS655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 (483) LYS657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 4 0 0 0 0 0 0 0 0 0 0 (487) ARG661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (454) ASN743 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdaleslldevalegldglclpalwsrletrvppfplplepctqeflwralathpgisfyeeprerpdlqlqdryeeidletgilesrrdpvaledvypihmilenkdgiqgscryfkerknitndirtkslqprctmveafdrwgkkliivasqamryraligqegdpdlklpdfsycilerlgrsrwqgelqrdlhttafkvdAgklHYhrkilnknglitmqshvirlptgaqQhsillllnrfhvdrrskydilmeklsvmlstrtnhietlgklreelglcertfkrlyQymlnaglakvvslrlqeihvmvrclkllktvppvdivferdmltqtydlierrgtkgisqaeirvamnvgkLeaRmlcRllqrfkvvkgfmedegRQrttkyiscvfaeesdlsrqyqrekarsellttvslaavieevretyrllkrrnliieavtnlrlieslftiqkmimdqekqegvstkcCkKsivRlvrnlseegllrlyrttviqdgikkkvdlvvhpsmdqndplvrsaieqvrfrisn/hcrgmapnglpnhimapvwkclhltkdfreqkhsywefaewiplawkwhllseleaapylpqeeksplfsvqreglpedgtlyrinrfssitahperwdvsfftggplwaldwcpvpegagasqyvalfsspdmnethplsqlhsgpgllqlwglgtlqqescpgnrahfvygiacdngciwdlkfcpsgawelpgtprkapllprlgllalacsdgkvllfslphpeallaqqppdavkpaiykvqcvatlqvgsmqatdpsecgqclslawmptrphqhlaagyyngmvvfwnlptnsplqrirlsdgslklypfqcflahdqavrtlqwckanshflvsagsdrkikfwdlrrpyepinsikrflstelawllpyngvtvaqdncyasyglcgihyidagylgfkayftaprkgtvwslsgsdwlgtiaagdisgeliaailpdmalnpiNvkrpverrfpiykadlipyrtytetvnhhyllfqdtdlgsfhdllrrepmlrmqegeghsqlcldrlqleaihkvrfspnldsygwlvsggqsglvrihfvrglasplghrmqlesrahfnamfq >8clj_H:WD40_repeat-like; title=TFIIIC TAUB-DNA DIMER organism=? DNA sequence DA(I2):DT(J73) DA(I3):DT(J72) DA(I4):DT(J71) DG(I5):DC(J70) DG(I6):DC(J69) DT(I7):DA(J68) DT(I8):DA(J67) DG(I9):DC(J66) DT(I10):DA(J65) DG(I11):DC(J64) DG(I12):DC(J63) DG(I13):DC(J62) DT(I14):DA(J61) DT(I15):DA(J60) DC(I16):DG(J59) DG(I17):DC(J58) DA(I18):DT(J57) DG(I19):DC(J56) DT(I20):DA(J55) DC(I21):DG(J54) DC(I22):DG(J53) DC(I23):DG(J52) DA(I24):DT(J51) DC(I25):DG(J50) DC(I26):DG(J49) DA(I27):DT(J48) DG(I28):DC(J47) DA(I29):DT(J46) DG(I30):DC(J45) DT(I31):DA(J44) DC(I32):DG(J43) DG(I33):DC(J42) DC(I34):DG(J41) DT(I35):DA(J40) DT(I36):DA(J39) chainH (454) ASN743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence hcrgmapnglpnhimapvwkclhltkdfreqkhsywefaewiplawkwhllseleaapylpqeeksplfsvqreglpedgtlyrinrfssitahperwdvsfftggplwaldwcpvpegagasqyvalfsspdmnethplsqlhsgpgllqlwglgtlqqescpgnrahfvygiacdngciwdlkfcpsgawelpgtprkapllprlgllalacsdgkvllfslphpeallaqqppdavkpaiykvqcvatlqvgsmqatdpsecgqclslawmptrphqhlaagyyngmvvfwnlptnsplqrirlsdgslklypfqcflahdqavrtlqwckanshflvsagsdrkikfwdlrrpyepinsikrflstelawllpyngvtvaqdncyasyglcgihyidagylgfkayftaprkgtvwslsgsdwlgtiaagdisgeliaailpdmalnpiNvkrpverrfpiykadlipyrtytetvnhhyllfqdtdlgsfhdllrrepmlrmqegeghsqlcldrlqleaihkvrfspnldsygwlvsggqsglvrihfvrglasplghrmqlesrahfnamfq >8com_A:Histone-fold; title=STRUCTURE OF THE NUCLEOSOME CORE PARTICLE FROM TRYPANOSOMA BRUCEI organism=? DNA sequence DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-12):DT(J13) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) chainA ( 42) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rpgtvalreirqfqrstdlllqkapfqrlvrevsgaqkeglRfqssailaaqeatesyivslladtnracihsgrvtiqpkdihlalclrg >8com_ABCDEFGH:Histone-fold; title=STRUCTURE OF THE NUCLEOSOME CORE PARTICLE FROM TRYPANOSOMA BRUCEI organism=? DNA sequence DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J13):DA(I-12) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) chainA ( 42) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 36) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 3) ARG21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rpgtvalreirqfqrstdlllqkapfqrlvrevsgaqkeglRfqssailaaqeatesyivslladtnracihsgrvtiqpkdihlalclrg/vrgitrgsirrlarrggvkrisgviydevrgvlksfvegvvRdatayteysrkktvtavdvvnalrkrgkilygya/ssrsvkaglifpvgrvgtllrrgqyarRigasgavymaavleyltaellelsvkaaaqqtkktkrltprtvtlavrhdddlgallrnvtmsrggvmp/rqrkrtwnvyvsrslrsinsqmsmtsrTmkivnsfvndlferiaaeaativrvnrkrtlgarelqtavrlvlpadlakhamaegtkavshass/lreirqfqrstdlllqkapfqrlvrevsgaqkeglRfqssailaaqeatesyivslladtnracihsgrvtiqpkdihlalclrg/vrgitrgsirrlarrggvkrisgviydevrgvlksFvegvvrdatayteysrkktvtavdvvnalrkrgkilygy/gssrsvkaglifpvgrvgtllrrgqyarrigasgaVymaavleyltaellelsvkaaaqqtkktkrltprtvtlavrhdddlgallrnvtmsrggvmp/rqRkrtwnvyvsrslrsinsqmsmtsrtmkivnsfvndlferiaaeaativrvnrkrtlgarelqtavrlvlpadlakhamaegtkavshass >8com_C:Histone-fold; title=STRUCTURE OF THE NUCLEOSOME CORE PARTICLE FROM TRYPANOSOMA BRUCEI organism=? DNA sequence DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-12):DT(J13) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) chainC ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ssrsvkaglifpvgrvgtllrrgqyarRigasgavymaavleyltaellelsvkaaaqqtkktkrltprtvtlavrhdddlgallrnvtmsrggvmp >8com_H:Histone-fold; title=STRUCTURE OF THE NUCLEOSOME CORE PARTICLE FROM TRYPANOSOMA BRUCEI organism=? DNA sequence DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-12):DT(J13) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) chainH ( 3) ARG21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rqRkrtwnvyvsrslrsinsqmsmtsrtmkivnsfvndlferiaaeaativrvnrkrtlgarelqtavrlvlpadlakhamaegtkavshass >8csh_AD: title=STRUCTURE OF THE DNA BINDING DOMAIN OF PSK1 PAR PARTITION PROTEIN BOUND TO CENTROMERE DNA organism=? DNA sequence DT(T8):DA(Y23) DG(T9):DC(Y22) DT(T10):DA(Y21) DT(T11):DA(Y20) DA(T12):DT(Y19) DG(T13):DC(Y18) DG(T14):DC(Y17) DT(T15):DA(Y16) DA(T16):DT(Y15) DC(T17):DG(Y14) DC(T18):DG(Y13) DT(T19):DA(Y12) DA(T20):DT(Y11) DA(T21):DT(Y10) DC(T22):DG(Y9) chainD ( 14) THR14 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 15) LYS15 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 16) GLN16 0 0 0 0 0 0 0 0 0 1 10 4 2 0 0 ( 17) THR17 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 20) ASN20 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 chainA ( 14) THR14 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 16) GLN16 0 0 0 2 6 11 1 0 0 0 0 0 0 0 0 ( 17) THR17 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 20) ASN20 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mktikmvadelnvTKQTvvNnaknlnisfekengvnyiddndylkivekitkk/mktikmvadelnvTKQTvvNnaknlnisfekengvnyiddndylkivekitkk >8csh_D: title=STRUCTURE OF THE DNA BINDING DOMAIN OF PSK1 PAR PARTITION PROTEIN BOUND TO CENTROMERE DNA organism=? DNA sequence DG(Y9):DC(T22) DT(Y10):DA(T21) DT(Y11):DA(T20) DA(Y12):DT(T19) DG(Y13):DC(T18) DG(Y14):DC(T17) DT(Y15):DA(T16) DA(Y16):DT(T15) DC(Y17):DG(T14) DC(Y18):DG(T13) DT(Y19):DA(T12) DA(Y20):DT(T11) DA(Y21):DT(T10) DC(Y22):DG(T9) DA(Y23):DT(T8) chainD ( 14) THR14 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) LYS15 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 16) GLN16 0 0 2 4 10 1 0 0 0 0 0 0 0 0 0 ( 17) THR17 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) ASN20 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mktikmvadelnvTKQTvvNnaknlnisfekengvnyiddndylkivekitkk >8csz_D:Ribonuclease_H-like; title=ISCB AND WRNA BOUND TO TARGET DNA organism=SYNTHETIC CONSTRUCT DNA sequence DC(E116):DG(B17) DT(E117):DA(B16) DA(E118):DT(B15) DG(E119):DC(B14) DA(E120):DT(B13) DA(E121):DT(B12) DG(E122):DC(B11) DT(E123):DA(B10) DC(E124):DG(B9) DG(E125):DC(B8) DA(E126):DT(B7) DG(E127):DC(B6) DG(E128):DC(B5) DT(E129):DA(B4) chainD (379) HIS379 5 8 0 0 0 0 0 0 0 0 0 0 0 0 (380) LYS380 4 7 2 0 0 0 0 0 0 0 0 0 0 0 (457) ARG457 1 3 0 0 0 0 0 0 0 0 0 0 0 0 (459) GLU459 0 3 1 4 0 0 0 0 0 0 0 0 0 0 (461) ARG461 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (467) ASN467 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (468) TYR468 0 0 0 0 1 4 0 0 0 0 0 0 0 0 (478) TRP478 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence mavvyvisksgkplmpttrcghvrillkegkarvverkpftiqltyesaeetqplvlgidpgrtnigmsvvtesgesvfnaqietrnkdvpklmkdrkqyrmahrrlkrrckrrrrakaagtafeegekqrllpgcfkpitcksirnkearfnnrkrpvgwltptanhllvthlnvvkkvqkilpvakvvlelnrfsfmamnnpkvqrwqyqrgplygkgsveeavsmqqdghclfckhgidhyhhvvprrkngsetlenrvglceehhrlvhtdkeweanlaskksgmnkkyhalsvlnqiipyladqladmfpgnfcvtsgqdtylfreehgipkdhyldayciacsaltdakkvsspkgrpymvhqfrrhdrqacHKanlnrsyymggklvatnrhkamdqktdsleeyraahsaadvskltvkhpsaqykdmsrimpgsilvsgegklftlsRsEgRnkgqvNYfvstegikyWarkcqylrnngglqiy >8ctl_D:Ribonuclease_H-like; title=ISCB AND WRNA BOUND TO TARGET DNA (LOCKED STATE) organism=SYNTHETIC CONSTRUCT DNA sequence DC(A5):DG(B128) DC(A6):DG(B127) DT(A7):DA(B126) DC(A8):DG(B125) DG(A9):DC(B124) DA(A10):DT(B123) DC(A11):DG(B122) DT(A12):DA(B121) DT(A13):DA(B120) DC(A14):DG(B119) DT(A15):DA(B118) DA(A16):DT(B117) DG(A17):DC(B116) chainD (286) HIS379 0 0 0 0 0 0 0 0 0 0 1 9 8 (287) LYS380 0 0 0 0 0 0 0 0 0 0 2 6 5 (364) ARG457 0 0 0 0 0 0 0 0 0 0 0 3 0 (366) GLU459 0 0 0 0 0 0 0 0 1 5 1 2 0 (374) ASN467 0 0 0 0 0 0 0 2 1 0 0 0 0 (375) TYR468 0 0 0 0 0 0 0 10 4 0 0 0 0 (385) TRP478 0 0 0 0 0 0 1 2 0 0 0 0 0 prot.sequence mavvyvisksgkplmpttrcghvrillkegkarvverkpftiqltyesaeetqplvlgidpgrtnigmsvvtesgesvfnaqietrnkdvpklmkdrkqyrmahrrlkrrckrrrrakaagtafeegekqrllpgcfkpitcksirnkearfnnrkrpvgwltptanhllvthlnvvkkvqkilpvakvvlelnrfsfmyhalsvlnqiipyladqladmfpgnfcvtsgqdtylfreehgipkdhyldayciacsaltdakkvsspkgrpymvhqfrrhdrqacHKanlnrsyymggklvatnrhkamdqktdsleeyraahsaadvskltvkhpsaqykdmsrimpgsilvsgegklftlsRsEgrnkgqvNYfvstegikyWarkcqylrnngglqiy >8cty_DG:Ribonuclease_H-like; title=12-MER DNA STRUCTURE OF EXBIM BOUND TO RNASE-H organism=Halalkalibacterium halodurans DNA sequence DC(I1):DG(J12) DG(I2):DC(J11) DC(I3):DG(J10) DG(I4):OWR(J9) DA(I5):DT(J8) DA(I6):DT(J7) DT(I7):DA(J6) DT(I8):DA(J5) OWR(I9):DG(J4) DG(I10):DC(J3) DC(I11):DG(J2) DG(I12):DC(J1) chainD (112) THR173 0 0 0 0 0 0 0 0 0 0 0 9 chainG ( 16) ASN77 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence eiiweslsvdvgsqgnpgiveykgvdtktgevlferepipigtnnmgeflaivhglrylkernsrkpiysnsqtaikwvkdkkakstlvrneetaliwklvdeaeewlnthTyetpilkwqtdkwgeika/eiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtnnmgeflaivhglrylkernsrkpiysnsqtaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikady >8cty_G:Ribonuclease_H-like; title=12-MER DNA STRUCTURE OF EXBIM BOUND TO RNASE-H organism=Halalkalibacterium halodurans DNA sequence DC(J1):DG(I12) DG(J2):DC(I11) DC(J3):DG(I10) DG(J4):OWR(I9) DA(J5):DT(I8) DA(J6):DT(I7) DT(J7):DA(I6) DT(J8):DA(I5) OWR(J9):DG(I4) DG(J10):DC(I3) DC(J11):DG(I2) DG(J12):DC(I1) chainG ( 16) ASN77 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence eiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtnnmgeflaivhglrylkernsrkpiysnsqtaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikady >8ctz_B:Ribonuclease_H-like; title=12-MER DNA STRUCTURE OF EXBIM & O6ME-G BOUND TO RNASE-H organism=Alkalihalobacillus halodurans DNA sequence DC(E1):DG(D12) DG(E2):DC(D11) DC(E3):DG(D10) 6OG(E4):OWR(D9) DA(E5):DT(D8) DA(E6):DT(D7) DT(E7):DA(D6) DT(E8):DA(D5) OWR(E9):6OG(D4) DG(E10):DC(D3) DC(E11):DG(D2) DG(E12):DC(D1) chainB ( 16) ASN77 6 1 0 0 0 0 0 0 0 0 0 0 prot.sequence eiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtnNmgeflaivhglrylkernsrkpiysnsqTaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeikad >8cu0_C:Ribonuclease_H-like; title=12-MER DNA STRUCTURE OF EXBIM BOUND TO RNASEH -MODIFIED DDD organism=Halalkalibacterium halodurans DNA sequence DC(E1):DG(D12) DG(E2):DC(D11) DG(E3):DC(D10) DC(E5):DG(D8) DA(E6):DT(D7) DT(E7):DA(D6) DG(E8):DC(D5) DC(E10):DG(D3) DC(E11):DG(D2) DG(E12):DC(D1) chainC prot.sequence eiiweslsvdvgsqgNpgiveykgvdtktgevlferepipigtnNmgeflaivhglrylkernsrkpiysnsqtaikwvkdkkakstlvrneetaliwklvdeaeewlnthtyetpilkwqtdkwgeika >8cuc_F:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE ANALYSIS OF SALL4 ZINC FINGER DOMAIN IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(B1):DC(A12) DC(B2):DG(A11) DT(B3):DA(A10) DA(B4):DT(A9) DA(B5):DT(A8) DT(B6):DA(A7) DA(B7):DT(A6) DT(B8):DA(A5) DT(B9):DA(A4) DT(B10):DA(A3) DC(B11):DG(A2) DG(B12):DC(A1) chainF ( 13) SER880 0 0 0 0 0 0 0 2 0 0 0 0 ( 16) SER883 0 0 0 0 0 0 0 0 0 3 0 0 ( 20) ILE887 0 0 0 0 0 1 0 0 0 0 0 0 ( 42) THR909 0 0 0 0 0 1 0 0 0 0 0 0 ( 45) ASN912 0 0 0 6 10 0 0 0 0 0 0 0 ( 48) VAL915 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence kqhgctrcgknfSSaSalqIherthtgekpfvcnicgraftTkgNlkvhymthg >8cuc_FH:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE ANALYSIS OF SALL4 ZINC FINGER DOMAIN IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(B1):DC(A12) DC(B2):DG(A11) DT(B3):DA(A10) DA(B4):DT(A9) DA(B5):DT(A8) DT(B6):DA(A7) DA(B7):DT(A6) DT(B8):DA(A5) DT(B9):DA(A4) DT(B10):DA(A3) DC(B11):DG(A2) DG(B12):DC(A1) chainF ( 13) SER880 0 0 0 0 0 0 0 2 0 0 0 0 ( 16) SER883 0 0 0 0 0 0 0 0 0 3 0 0 ( 20) ILE887 0 0 0 0 0 1 0 0 0 0 0 0 ( 42) THR909 0 0 0 0 0 1 0 0 0 0 0 0 ( 45) ASN912 0 0 0 6 10 0 0 0 0 0 0 0 ( 48) VAL915 0 0 1 0 0 0 0 0 0 0 0 0 chainH prot.sequence kqhgctrcgknfSSaSalqIherthtgekpfvcnicgraftTkgNlkVhymthg/gekpfvcnicgrAFtTkgnLkvhymthg >8cww_A:Histone-fold; title=STRUCTURE OF S. CEREVISIAE HOP1 CBR BOUND TO A NUCLEOSOME organism=? DNA sequence DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >8cxs_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR MTA organism=Clostridioides difficile DNA sequence DT(d1):DT(e15) DT(d2):DA(e14) DC(d3):DG(e13) DA(d4):DT(e12) DA(d5):DT(e11) DA(d6):DT(e10) DA(d7):DT(e9) DA(d8):DT(e8) DG(d9):DC(e7) DT(d10):DA(e6) DC(d11):DG(e5) DC(d12):DG(e4) DC(d13):DG(e3) DA(d14):DT(e2) DA(d15):DA(e1) chainA ( 5) TYR30 0 0 0 0 0 0 0 54 0 0 0 0 0 0 0 (135) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (138) TYR168 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 (141) HIS171 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 (142) LYS172 0 0 0 0 6 9 4 0 0 0 0 0 0 0 0 (162) ASP192 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (163) LYS193 0 0 8 5 7 0 0 0 0 0 0 0 0 0 0 (191) TYR221 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (223) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (225) ASN255 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (226) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (228) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (316) GLN346 0 0 0 9 9 1 0 0 0 0 0 0 0 0 0 (319) ILE349 0 0 0 1 5 10 0 0 0 0 0 0 0 0 0 (349) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (395) ARG425 0 1 11 19 0 0 0 0 0 0 0 0 0 0 0 (396) GLU426 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 (401) ILE431 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (408) GLN438 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (409) TRP439 0 13 14 11 4 0 0 0 0 0 0 0 0 0 0 (411) ARG441 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 (425) TYR455 0 0 0 0 0 0 6 15 0 0 0 0 0 0 0 (426) LYS456 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 (442) SER472 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (443) ALA473 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (444) ASP474 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (446) TYR476 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (483) MET513 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (484) SER514 0 0 0 0 0 0 7 0 5 0 0 0 0 0 0 (487) ILE517 0 0 0 0 0 0 3 3 3 0 0 0 0 0 0 (491) TYR521 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 chainB (404) ILE431 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence asgiYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cxt_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR N6-BENZYLADENOSINE (COMPOUND 1) organism=Clostridioides difficile 630 DNA sequence DT(d16):DA(e27) DG(d17):DC(e26) DG(d18):DC(e25) DG(d19):DC(e24) DA(d20):DT(e23) DC(d21):DG(e22) DT(d22):DA(e21) DT(d23):DA(e20) DT(d24):DA(e19) DT(d25):DA(e18) DT(d26):DA(e17) DG(d27):DC(e16) DA(d28):DT(e15) chainA chainB ( 3) TYR30 0 0 0 0 0 0 50 0 0 0 0 0 0 (138) ASN165 0 0 0 0 0 0 10 0 0 0 0 0 0 (141) TYR168 0 0 0 0 0 0 47 0 0 0 0 0 0 (144) HIS171 0 0 0 0 0 0 0 0 5 8 0 0 0 (145) LYS172 0 0 0 0 0 0 0 2 5 5 0 0 0 (165) ASP192 0 0 0 0 0 0 0 0 0 0 0 1 0 (166) LYS193 0 0 0 0 0 0 0 0 0 4 3 7 0 (194) TYR221 0 0 0 0 0 0 0 2 0 0 0 0 0 (226) PHE253 0 0 0 0 0 0 8 0 0 0 0 0 0 (229) ILE256 0 0 0 0 0 0 1 0 0 0 0 0 0 (231) VAL258 0 0 0 0 0 0 1 0 0 0 0 0 0 (319) GLN346 0 0 0 0 0 0 0 0 0 10 9 0 0 (322) ILE349 0 0 0 0 0 0 0 0 10 6 1 0 0 (352) SER379 0 0 0 0 0 0 2 0 0 0 0 0 0 (398) ARG425 0 0 0 0 0 0 0 0 0 0 16 14 4 (399) GLU426 0 0 0 0 0 0 0 0 0 0 1 0 0 (404) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 1 (411) GLN438 0 0 0 0 0 0 0 0 0 3 1 0 0 (412) TRP439 0 0 0 0 0 0 0 0 0 2 10 14 12 (414) ARG441 0 0 0 0 0 0 0 0 0 0 9 2 0 (428) TYR455 0 0 0 0 0 0 14 4 0 0 0 0 0 (429) LYS456 0 0 0 0 0 0 8 11 0 0 0 0 0 (445) SER472 0 0 0 0 0 0 0 0 1 0 0 0 0 (446) ALA473 0 0 0 0 0 0 0 0 4 0 0 0 0 (447) ASP474 0 0 0 0 0 0 0 1 0 0 0 0 0 (449) TYR476 0 0 0 0 0 0 0 0 0 2 0 0 0 (486) MET513 0 0 0 0 0 0 0 8 0 0 0 0 0 (487) SER514 0 0 0 0 0 5 0 6 0 0 0 0 0 (490) ILE517 0 0 0 0 0 2 3 3 0 0 0 0 0 (494) TYR521 0 0 0 0 0 0 0 0 8 1 0 0 0 prot.sequence sgiyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgirkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFknIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cxu_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND COMPOUND 2 organism=Clostridioides difficile 630 DNA sequence DT(d1):DT(e15) DT(d2):DA(e14) DC(d3):DG(e13) DA(d4):DT(e12) DA(d5):DT(e11) DA(d6):DT(e10) DA(d7):DT(e9) DA(d8):DT(e8) DG(d9):DC(e7) DT(d10):DA(e6) DC(d11):DG(e5) DC(d12):DG(e4) DC(d13):DG(e3) DA(d14):DT(e2) DA(d15):DA(e1) chainA ( 3) TYR30 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 (133) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (136) TYR168 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 (139) HIS171 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 (140) LYS172 0 0 0 0 6 9 4 0 0 0 0 0 0 0 0 (160) ASP192 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (161) LYS193 0 0 6 4 6 0 0 0 0 0 0 0 0 0 0 (189) TYR221 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (221) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (223) ASN255 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (224) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (226) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (314) GLN346 0 0 0 9 10 1 0 0 0 0 0 0 0 0 0 (317) ILE349 0 0 0 1 5 12 0 0 0 0 0 0 0 0 0 (347) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (393) ARG425 0 2 11 18 0 0 0 0 0 0 0 0 0 0 0 (394) GLU426 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 (399) ILE431 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (406) GLN438 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (407) TRP439 0 13 16 12 4 0 0 0 0 0 0 0 0 0 0 (409) ARG441 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 (423) TYR455 0 0 0 0 0 0 4 16 0 0 0 0 0 0 0 (424) LYS456 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 (440) SER472 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (441) ALA473 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (442) ASP474 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (444) TYR476 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (481) MET513 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (482) SER514 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 (485) ILE517 0 0 0 0 0 0 3 3 4 0 0 0 0 0 0 (489) TYR521 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 chainB (404) ILE431 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cxv_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND COMPOUND 3 organism=Clostridioides difficile 630 DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainA ( 3) TYR30 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 (133) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (136) TYR168 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 (139) HIS171 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 (140) LYS172 0 0 0 0 0 0 0 0 4 9 6 0 0 0 0 (160) ASP192 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (161) LYS193 0 0 0 0 0 0 0 0 0 0 6 4 6 0 0 (189) TYR221 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (221) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (223) ASN255 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (224) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (226) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (314) GLN346 0 0 0 0 0 0 0 0 0 1 10 9 0 0 0 (317) ILE349 0 0 0 0 0 0 0 0 0 11 5 1 0 0 0 (347) SER379 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (393) ARG425 0 0 0 0 0 0 0 0 0 0 0 18 11 2 0 (394) GLU426 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (399) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 (406) GLN438 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (407) TRP439 0 0 0 0 0 0 0 0 0 0 4 12 15 13 0 (409) ARG441 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 (423) TYR455 0 0 0 0 0 0 0 14 4 0 0 0 0 0 0 (424) LYS456 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 (440) SER472 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (441) ALA473 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (442) ASP474 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (444) TYR476 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (481) MET513 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (482) SER514 0 0 0 0 0 0 5 0 6 0 0 0 0 0 0 (485) ILE517 0 0 0 0 0 0 4 3 3 0 0 0 0 0 0 (489) TYR521 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 chainB (404) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cxw_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR PICLIDENOSON (COMPOUND 4) organism=Clostridioides difficile 630 DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainA ( 1) TYR30 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 (131) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (134) TYR168 0 0 0 0 0 0 0 52 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 (138) LYS172 0 0 0 0 0 0 0 0 4 9 6 0 0 0 0 (158) ASP192 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (159) LYS193 0 0 0 0 0 0 0 0 0 0 6 4 6 0 0 (187) TYR221 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (219) PHE253 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (221) ASN255 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (222) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (224) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (312) GLN346 0 0 0 0 0 0 0 0 0 1 11 9 0 0 0 (315) ILE349 0 0 0 0 0 0 0 0 0 10 5 1 0 0 0 (345) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (391) ARG425 0 0 0 0 0 0 0 0 0 0 0 18 11 2 0 (392) GLU426 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 (397) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 (404) GLN438 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (405) TRP439 0 0 0 0 0 0 0 0 0 0 4 13 13 15 0 (407) ARG441 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 (421) TYR455 0 0 0 0 0 0 0 16 4 0 0 0 0 0 0 (422) LYS456 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 (438) SER472 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (439) ALA473 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (440) ASP474 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (442) TYR476 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (479) MET513 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (480) SER514 0 0 0 0 0 0 5 0 6 0 0 0 0 0 0 (483) ILE517 0 0 0 0 0 0 2 3 3 0 0 0 0 0 0 (487) TYR521 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 prot.sequence YytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cxw_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR PICLIDENOSON (COMPOUND 4) organism=Clostridioides difficile 630 DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainA ( 1) TYR30 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 (131) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (134) TYR168 0 0 0 0 0 0 0 52 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 (138) LYS172 0 0 0 0 0 0 0 0 4 9 6 0 0 0 0 (158) ASP192 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (159) LYS193 0 0 0 0 0 0 0 0 0 0 6 4 6 0 0 (187) TYR221 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (219) PHE253 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (221) ASN255 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (222) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (224) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (312) GLN346 0 0 0 0 0 0 0 0 0 1 11 9 0 0 0 (315) ILE349 0 0 0 0 0 0 0 0 0 10 5 1 0 0 0 (345) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (391) ARG425 0 0 0 0 0 0 0 0 0 0 0 18 11 2 0 (392) GLU426 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 (397) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 (404) GLN438 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (405) TRP439 0 0 0 0 0 0 0 0 0 0 4 13 13 15 0 (407) ARG441 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 (421) TYR455 0 0 0 0 0 0 0 16 4 0 0 0 0 0 0 (422) LYS456 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 (438) SER472 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (439) ALA473 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (440) ASP474 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (442) TYR476 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (479) MET513 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (480) SER514 0 0 0 0 0 0 5 0 6 0 0 0 0 0 0 (483) ILE517 0 0 0 0 0 0 2 3 3 0 0 0 0 0 0 (487) TYR521 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 chainB (403) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence YytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/iyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cxx_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND COMPOUND 6 organism=Clostridioides difficile 630 DNA sequence DT(d1):DT(e15) DT(d2):DA(e14) DC(d3):DG(e13) DA(d4):DT(e12) DA(d5):DT(e11) DA(d6):DT(e10) DA(d7):DT(e9) DA(d8):DT(e8) DG(d9):DC(e7) DT(d10):DA(e6) DC(d11):DG(e5) DC(d12):DG(e4) DC(d13):DG(e3) DA(d14):DT(e2) DA(d15):DA(e1) chainA ( 3) TYR30 0 0 0 0 0 0 0 49 0 0 0 0 0 0 0 (134) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (137) TYR168 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 (140) HIS171 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 (141) LYS172 0 0 0 0 8 9 4 0 0 0 0 0 0 0 0 (161) ASP192 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (162) LYS193 0 0 6 4 7 0 0 0 0 0 0 0 0 0 0 (190) TYR221 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (222) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (224) ASN255 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (225) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (227) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (315) GLN346 0 0 0 9 10 1 0 0 0 0 0 0 0 0 0 (318) ILE349 0 0 0 1 4 10 0 0 0 0 0 0 0 0 0 (348) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (394) ARG425 0 2 11 18 0 0 0 0 0 0 0 0 0 0 0 (395) GLU426 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 (400) ILE431 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) GLN438 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (408) TRP439 0 13 14 12 6 0 0 0 0 0 0 0 0 0 0 (410) ARG441 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 (424) TYR455 0 0 0 0 0 0 4 14 0 0 0 0 0 0 0 (425) LYS456 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 (441) SER472 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (442) ALA473 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (443) ASP474 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (445) TYR476 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (482) MET513 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (483) SER514 0 0 0 0 0 0 7 0 5 0 0 0 0 0 0 (486) ILE517 0 0 0 0 0 0 3 3 3 0 0 0 0 0 0 (490) TYR521 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 chainB (404) ILE431 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cxx_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND COMPOUND 6 organism=Clostridioides difficile 630 DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainB (404) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cxy_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR N6-(2-PHENETHYL)ADENOSINE (COMPOUND 8) organism=Clostridioides difficile DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainA ( 3) TYR30 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 (133) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (136) TYR168 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 (139) HIS171 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 (140) LYS172 0 0 0 0 0 0 0 0 4 9 7 0 0 0 0 (160) ASP192 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (161) LYS193 0 0 0 0 0 0 0 0 0 0 6 4 6 0 0 (189) TYR221 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (221) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (224) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (226) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (314) GLN346 0 0 0 0 0 0 0 0 0 1 10 11 0 0 0 (317) ILE349 0 0 0 0 0 0 0 0 0 11 5 1 0 0 0 (347) SER379 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (393) ARG425 0 0 0 0 0 0 0 0 0 0 0 17 11 2 0 (394) GLU426 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (399) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 (406) GLN438 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (407) TRP439 0 0 0 0 0 0 0 0 0 0 4 10 15 13 0 (409) ARG441 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 (423) TYR455 0 0 0 0 0 0 0 17 5 0 0 0 0 0 0 (424) LYS456 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 (440) SER472 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (441) ALA473 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (442) ASP474 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (444) TYR476 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (481) MET513 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (482) SER514 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 (485) ILE517 0 0 0 0 0 0 3 3 3 0 0 0 0 0 0 (489) TYR521 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 chainB (404) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFknIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cxy_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR N6-(2-PHENETHYL)ADENOSINE (COMPOUND 8) organism=Clostridioides difficile DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainB (404) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cxz_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR N6-(3-PHENYLPROPYL)ADENOSINE (COMPOUND 14) organism=Clostridioides difficile DNA sequence DT(d1):DT(e15) DT(d2):DA(e14) DC(d3):DG(e13) DA(d4):DT(e12) DA(d5):DT(e11) DA(d6):DT(e10) DA(d7):DT(e9) DA(d8):DT(e8) DG(d9):DC(e7) DT(d10):DA(e6) DC(d11):DG(e5) DC(d12):DG(e4) DC(d13):DG(e3) DA(d14):DT(e2) DA(d15):DA(e1) chainA ( 3) TYR30 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 (134) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (137) TYR168 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 (140) HIS171 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 (141) LYS172 0 0 0 0 8 9 4 0 0 0 0 0 0 0 0 (161) ASP192 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (162) LYS193 0 0 6 4 7 0 0 0 0 0 0 0 0 0 0 (190) TYR221 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (222) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (224) ASN255 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (225) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (227) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (315) GLN346 0 0 0 9 10 1 0 0 0 0 0 0 0 0 0 (318) ILE349 0 0 0 1 5 10 0 0 0 0 0 0 0 0 0 (348) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (394) ARG425 0 2 11 18 0 0 0 0 0 0 0 0 0 0 0 (395) GLU426 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (400) ILE431 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) GLN438 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (408) TRP439 0 13 14 12 4 0 0 0 0 0 0 0 0 0 0 (410) ARG441 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 (424) TYR455 0 0 0 0 0 0 4 17 0 0 0 0 0 0 0 (425) LYS456 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 (441) SER472 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (442) ALA473 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (443) ASP474 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (445) TYR476 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (482) MET513 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (483) SER514 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 (486) ILE517 0 0 0 0 0 0 3 3 4 0 0 0 0 0 0 (490) TYR521 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 chainB (404) ILE431 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cxz_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR N6-(3-PHENYLPROPYL)ADENOSINE (COMPOUND 14) organism=Clostridioides difficile DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainB (404) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cy0_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR MC4756 (COMPOUND 178) organism=Clostridioides difficile DNA sequence DT(d1):DT(e15) DT(d2):DA(e14) DC(d3):DG(e13) DA(d4):DT(e12) DA(d5):DT(e11) DA(d6):DT(e10) DA(d7):DT(e9) DA(d8):DT(e8) DG(d9):DC(e7) DT(d10):DA(e6) DC(d11):DG(e5) DC(d12):DG(e4) DC(d13):DG(e3) DA(d14):DT(e2) DA(d15):DA(e1) chainA ( 3) TYR30 0 0 0 0 0 0 0 49 0 0 0 0 0 0 0 (133) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (136) TYR168 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 (139) HIS171 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 (140) LYS172 0 0 0 0 6 9 4 0 0 0 0 0 0 0 0 (160) ASP192 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (161) LYS193 0 0 6 4 8 0 0 0 0 0 0 0 0 0 0 (189) TYR221 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (221) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (223) ASN255 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (224) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (226) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (314) GLN346 0 0 0 9 11 1 0 0 0 0 0 0 0 0 0 (317) ILE349 0 0 0 1 4 8 0 0 0 0 0 0 0 0 0 (347) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (393) ARG425 0 1 12 20 0 0 0 0 0 0 0 0 0 0 0 (394) GLU426 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 (399) ILE431 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (406) GLN438 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (407) TRP439 0 13 13 11 4 0 0 0 0 0 0 0 0 0 0 (409) ARG441 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 (423) TYR455 0 0 0 0 0 0 4 16 0 0 0 0 0 0 0 (424) LYS456 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 (440) SER472 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (441) ALA473 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (442) ASP474 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (444) TYR476 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (481) MET513 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (482) SER514 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 (485) ILE517 0 0 0 0 0 0 3 3 4 0 0 0 0 0 0 (489) TYR521 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 chainB (404) ILE431 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cy1_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND COMPOUND 19 organism=Clostridioides difficile DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainA ( 3) TYR30 0 0 0 0 0 0 0 54 0 0 0 0 0 0 0 (134) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (137) TYR168 0 0 0 0 0 0 0 49 0 0 0 0 0 0 0 (140) HIS171 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 (141) LYS172 0 0 0 0 0 0 0 0 4 9 8 0 0 0 0 (161) ASP192 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (162) LYS193 0 0 0 0 0 0 0 0 0 0 7 4 6 0 0 (190) TYR221 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (222) PHE253 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (224) ASN255 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (225) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (227) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (315) GLN346 0 0 0 0 0 0 0 0 0 1 10 9 0 0 0 (318) ILE349 0 0 0 0 0 0 0 0 0 10 5 1 0 0 0 (348) SER379 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (394) ARG425 0 0 0 0 0 0 0 0 0 0 0 17 11 1 0 (395) GLU426 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (400) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 (407) GLN438 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (408) TRP439 0 0 0 0 0 0 0 0 0 0 4 12 14 13 0 (410) ARG441 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 (424) TYR455 0 0 0 0 0 0 0 15 4 0 0 0 0 0 0 (425) LYS456 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 (441) SER472 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (442) ALA473 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (443) ASP474 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (445) TYR476 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (482) MET513 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (483) SER514 0 0 0 0 0 0 5 0 6 0 0 0 0 0 0 (486) ILE517 0 0 0 0 0 0 3 3 3 0 0 0 0 0 0 (490) TYR521 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 chainB (404) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cy1_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND COMPOUND 19 organism=Clostridioides difficile DNA sequence DT(d1):DT(e15) DT(d2):DA(e14) DC(d3):DG(e13) DA(d4):DT(e12) DA(d5):DT(e11) DA(d6):DT(e10) DA(d7):DT(e9) DA(d8):DT(e8) DG(d9):DC(e7) DT(d10):DA(e6) DC(d11):DG(e5) DC(d12):DG(e4) DC(d13):DG(e3) DA(d14):DT(e2) DA(d15):DA(e1) chainB (404) ILE431 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cy2_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR APNEA (COMPOUND 9) organism=Clostridioides difficile DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainA ( 3) TYR30 0 0 0 0 0 0 0 52 0 0 0 0 0 0 0 (132) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (135) TYR168 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 (138) HIS171 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 (139) LYS172 0 0 0 0 0 0 0 0 4 9 8 0 0 0 0 (159) ASP192 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (160) LYS193 0 0 0 0 0 0 0 0 0 0 6 4 6 0 0 (188) TYR221 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (220) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (223) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (225) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (313) GLN346 0 0 0 0 0 0 0 0 0 1 10 9 0 0 0 (316) ILE349 0 0 0 0 0 0 0 0 0 8 4 1 0 0 0 (346) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (392) ARG425 0 0 0 0 0 0 0 0 0 0 0 17 11 2 0 (393) GLU426 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 (398) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 (405) GLN438 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 (406) TRP439 0 0 0 0 0 0 0 0 0 0 4 13 14 13 0 (408) ARG441 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 (422) TYR455 0 0 0 0 0 0 0 17 4 0 0 0 0 0 0 (423) LYS456 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 (439) SER472 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (440) ALA473 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (441) ASP474 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (443) TYR476 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (480) MET513 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 (481) SER514 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 (484) ILE517 0 0 0 0 0 0 2 3 3 0 0 0 0 0 0 (488) TYR521 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFknIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cy2_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR APNEA (COMPOUND 9) organism=Clostridioides difficile DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainA ( 3) TYR30 0 0 0 0 0 0 0 52 0 0 0 0 0 0 0 (132) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (135) TYR168 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 (138) HIS171 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 (139) LYS172 0 0 0 0 0 0 0 0 4 9 8 0 0 0 0 (159) ASP192 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (160) LYS193 0 0 0 0 0 0 0 0 0 0 6 4 6 0 0 (188) TYR221 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (220) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (223) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (225) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (313) GLN346 0 0 0 0 0 0 0 0 0 1 10 9 0 0 0 (316) ILE349 0 0 0 0 0 0 0 0 0 8 4 1 0 0 0 (346) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (392) ARG425 0 0 0 0 0 0 0 0 0 0 0 17 11 2 0 (393) GLU426 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 (398) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 (405) GLN438 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 (406) TRP439 0 0 0 0 0 0 0 0 0 0 4 13 14 13 0 (408) ARG441 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 (422) TYR455 0 0 0 0 0 0 0 17 4 0 0 0 0 0 0 (423) LYS456 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 (439) SER472 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (440) ALA473 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (441) ASP474 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (443) TYR476 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (480) MET513 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 (481) SER514 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 (484) ILE517 0 0 0 0 0 0 2 3 3 0 0 0 0 0 0 (488) TYR521 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 chainB (404) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFknIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cy3_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND COMPOUND 15 organism=Clostridioides difficile DNA sequence DT(d1):DT(e15) DT(d2):DA(e14) DC(d3):DG(e13) DA(d4):DT(e12) DA(d5):DT(e11) DA(d6):DT(e10) DA(d7):DT(e9) DA(d8):DT(e8) DG(d9):DC(e7) DT(d10):DA(e6) DC(d11):DG(e5) DC(d12):DG(e4) DC(d13):DG(e3) DA(d14):DT(e2) DA(d15):DA(e1) chainA ( 3) TYR30 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 (134) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (137) TYR168 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 (140) HIS171 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 (141) LYS172 0 0 0 0 8 9 4 0 0 0 0 0 0 0 0 (161) ASP192 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (162) LYS193 0 0 5 3 7 0 0 0 0 0 0 0 0 0 0 (190) TYR221 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (222) PHE253 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (224) ASN255 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (225) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (227) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (315) GLN346 0 0 0 11 10 1 0 0 0 0 0 0 0 0 0 (318) ILE349 0 0 0 1 5 11 0 0 0 0 0 0 0 0 0 (348) SER379 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (394) ARG425 0 2 12 18 0 0 0 0 0 0 0 0 0 0 0 (395) GLU426 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (400) ILE431 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) GLN438 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (408) TRP439 0 13 15 12 4 0 0 0 0 0 0 0 0 0 0 (410) ARG441 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 (424) TYR455 0 0 0 0 0 0 4 13 0 0 0 0 0 0 0 (425) LYS456 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 (441) SER472 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (442) ALA473 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (443) ASP474 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (445) TYR476 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (482) MET513 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (483) SER514 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 (486) ILE517 0 0 0 0 0 0 3 3 4 0 0 0 0 0 0 (490) TYR521 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 chainB (404) ILE431 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cy3_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND COMPOUND 15 organism=Clostridioides difficile DNA sequence DT(d1):DT(e15) DT(d2):DA(e14) DC(d3):DG(e13) DA(d4):DT(e12) DA(d5):DT(e11) DA(d6):DT(e10) DA(d7):DT(e9) DA(d8):DT(e8) DG(d9):DC(e7) DT(d10):DA(e6) DC(d11):DG(e5) DC(d12):DG(e4) DC(d13):DG(e3) DA(d14):DT(e2) DA(d15):DA(e1) chainB (404) ILE431 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cy4_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND COMPOUND 16 organism=Clostridioides difficile DNA sequence DT(d1):DT(e15) DT(d2):DA(e14) DC(d3):DG(e13) DA(d4):DT(e12) DA(d5):DT(e11) DA(d6):DT(e10) DA(d7):DT(e9) DA(d8):DT(e8) DG(d9):DC(e7) DT(d10):DA(e6) DC(d11):DG(e5) DC(d12):DG(e4) DC(d13):DG(e3) DA(d14):DT(e2) DA(d15):DA(e1) chainA ( 3) TYR30 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 (134) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (137) TYR168 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 (140) HIS171 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 (141) LYS172 0 0 0 0 8 9 4 0 0 0 0 0 0 0 0 (161) ASP192 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (162) LYS193 0 0 6 4 7 0 0 0 0 0 0 0 0 0 0 (190) TYR221 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (222) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (224) ASN255 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (225) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (227) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (315) GLN346 0 0 0 10 10 1 0 0 0 0 0 0 0 0 0 (318) ILE349 0 0 0 1 5 11 0 0 0 0 0 0 0 0 0 (348) SER379 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (394) ARG425 0 2 11 18 0 0 0 0 0 0 0 0 0 0 0 (395) GLU426 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 (400) ILE431 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) GLN438 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (408) TRP439 0 14 14 10 4 0 0 0 0 0 0 0 0 0 0 (410) ARG441 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 (424) TYR455 0 0 0 0 0 0 4 13 0 0 0 0 0 0 0 (425) LYS456 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 (441) SER472 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (442) ALA473 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (443) ASP474 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (445) TYR476 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (482) MET513 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (483) SER514 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 (486) ILE517 0 0 0 0 0 0 3 4 4 0 0 0 0 0 0 (490) TYR521 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 chainB (404) ILE431 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cy4_B:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND COMPOUND 16 organism=Clostridioides difficile DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainB (404) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cy5_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND COMPOUND 39 organism=Clostridioides difficile DNA sequence DT(d1):DT(e15) DT(d2):DA(e14) DC(d3):DG(e13) DA(d4):DT(e12) DA(d5):DT(e11) DA(d6):DT(e10) DA(d7):DT(e9) DA(d8):DT(e8) DG(d9):DC(e7) DT(d10):DA(e6) DC(d11):DG(e5) DC(d12):DG(e4) DC(d13):DG(e3) DA(d14):DT(e2) DA(d15):DA(e1) chainA ( 3) TYR30 0 0 0 0 0 0 0 52 0 0 0 0 0 0 0 (134) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (137) TYR168 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 (140) HIS171 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 (141) LYS172 0 0 0 0 7 10 4 0 0 0 0 0 0 0 0 (161) ASP192 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (162) LYS193 0 0 6 5 7 0 0 0 0 0 0 0 0 0 0 (190) TYR221 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (222) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (224) ASN255 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (225) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (227) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (315) GLN346 0 0 0 9 9 1 0 0 0 0 0 0 0 0 0 (318) ILE349 0 0 0 1 5 10 0 0 0 0 0 0 0 0 0 (348) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (394) ARG425 0 2 11 18 0 0 0 0 0 0 0 0 0 0 0 (395) GLU426 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 (400) ILE431 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) GLN438 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (408) TRP439 0 13 13 12 5 0 0 0 0 0 0 0 0 0 0 (410) ARG441 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 (424) TYR455 0 0 0 0 0 0 5 13 0 0 0 0 0 0 0 (425) LYS456 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 (441) SER472 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (442) ALA473 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (443) ASP474 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (445) TYR476 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (482) MET513 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (483) SER514 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 (486) ILE517 0 0 0 0 0 0 3 3 4 0 0 0 0 0 0 (490) TYR521 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cy5_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND COMPOUND 39 organism=Clostridioides difficile DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainA ( 3) TYR30 0 0 0 0 0 0 0 52 0 0 0 0 0 0 0 (134) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (137) TYR168 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 (140) HIS171 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 (141) LYS172 0 0 0 0 0 0 0 0 4 10 7 0 0 0 0 (161) ASP192 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (162) LYS193 0 0 0 0 0 0 0 0 0 0 7 5 6 0 0 (190) TYR221 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (222) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (224) ASN255 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (225) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (227) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (315) GLN346 0 0 0 0 0 0 0 0 0 1 9 9 0 0 0 (318) ILE349 0 0 0 0 0 0 0 0 0 10 5 1 0 0 0 (348) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (394) ARG425 0 0 0 0 0 0 0 0 0 0 0 18 11 2 0 (395) GLU426 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 (400) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 (407) GLN438 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (408) TRP439 0 0 0 0 0 0 0 0 0 0 5 12 13 13 0 (410) ARG441 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 (424) TYR455 0 0 0 0 0 0 0 13 5 0 0 0 0 0 0 (425) LYS456 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 (441) SER472 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (442) ALA473 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (443) ASP474 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (445) TYR476 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (482) MET513 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (483) SER514 0 0 0 0 0 0 5 0 6 0 0 0 0 0 0 (486) ILE517 0 0 0 0 0 0 4 3 3 0 0 0 0 0 0 (490) TYR521 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 chainB (404) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence giYytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/giyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8cyf_A: title=WHIB3 BOUND TO SIGMAAR4-RNAP BETA FLAP TIP CHIMERA AND DNA organism=? DNA sequence DA(C2):DT(D16) DA(C3):DT(D15) DA(C4):DT(D14) DA(C5):DT(D13) DT(C6):DA(D12) DC(C7):DG(D11) DG(C8):DC(D10) DG(C9):DC(D9) DT(C10):DA(D8) DT(C11):DA(D7) DG(C12):DC(D6) DT(C13):DA(D5) DG(C14):DC(D4) DG(C15):DC(D3) DT(C16):DA(D2) chainA ( 23) ARG38 0 0 0 0 0 3 8 11 0 0 0 0 0 0 0 prot.sequence nwqlqglcrgmdssmffhpdgeRgrartqreqrakemcrrcpvieacrshalevgepygvwgglseserdlllkg >8cyf_AB:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=WHIB3 BOUND TO SIGMAAR4-RNAP BETA FLAP TIP CHIMERA AND DNA organism=? DNA sequence DA(C2):DT(D16) DA(C3):DT(D15) DA(C4):DT(D14) DA(C5):DT(D13) DT(C6):DA(D12) DC(C7):DG(D11) DG(C8):DC(D10) DG(C9):DC(D9) DT(C10):DA(D8) DT(C11):DA(D7) DG(C12):DC(D6) DT(C13):DA(D5) DG(C14):DC(D4) DG(C15):DC(D3) DT(C16):DA(D2) chainA ( 23) ARG38 0 0 0 0 0 3 8 11 0 0 0 0 0 0 0 chainB ( 50) THR499 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) GLU501 14 8 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG502 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLN505 0 1 7 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nwqlqglcrgmdssmffhpdgeRgrartqreqrakemcrrcpvieacrshalevgepygvwgglseserdlllkg/avsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTrERirQiesktmsklrhpsrsqvlrdgtpeerllraifg >8cyf_B:Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=WHIB3 BOUND TO SIGMAAR4-RNAP BETA FLAP TIP CHIMERA AND DNA organism=? DNA sequence DA(C2):DT(D16) DA(C3):DT(D15) DA(C4):DT(D14) DA(C5):DT(D13) DT(C6):DA(D12) DC(C7):DG(D11) DG(C8):DC(D10) DG(C9):DC(D9) DT(C10):DA(D8) DT(C11):DA(D7) DG(C12):DC(D6) DT(C13):DA(D5) DG(C14):DC(D4) DG(C15):DC(D3) DT(C16):DA(D2) chainB ( 50) THR499 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) GLU501 14 8 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) ARG502 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLN505 0 1 7 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence avsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTrERirQiesktmsklrhpsrsqvlrdgtpeerllraifg >8cze_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF A XENOPUS NUCLEOSOME WITH WIDOM 601 DNA organism=? DNA sequence DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvIrdavtytehakrktvtamdvvyalkrqgrtlygfgg/tRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/vlrDniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/tRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8czq_A:Prokaryotic_type_I_DNA_topoisomerase; title=THE CRYSTAL STRUCTURE OF MTBTOP1 IN COMPLEX WITH BOTH G- AND T- SEGMENTS organism=? DNA sequence DT(D3):DG(C6) DC(D4):DC(C7) DC(D5):DT(C8) DG(D6):DT(C9) DC(D7):DG(C10) DT(D8):DA(C11) DT(D9):DC(C12) chainA (427) ARG460 0 0 0 0 0 4 0 (506) SER555 9 0 0 0 0 0 0 (507) ALA556 2 0 0 0 0 0 0 prot.sequence sgrrlvivesptkarklasylgsgyivessrghirdlpraasdvpakyksqpwarlgvnvdadfeplyiispekrstvselrgllkdvdelylatdgdregeaiawhlletlkpripvkrmvfheitepairaaaehprdldidlvdaqetrrildrlygyevspvlwkkvapklsagrvqsvatriivarerdrmafrsaaywdilakltfsarltavagrrvatgrdfdslgtlrkevivldegsatalaadgtqltvasaeekpyarrpyppfmtstlqqeasrklrfsaertmsiaqrlyengyitymrtdsttlsesainaartqarqlygdeyvapaprqytrkvkqeaheairpagetfatpdavrreldgpniddfrlyeliwqrtvasqmadargmtlslritgmsghqevvfsatgRtltfpgflkayvrlphltpgqrldiveltpdghatnpparyteaslvkaleelgigrpstyssiiktiqdrgyvhkkgSAlvpswvafavtglleqhfgrlvdydftaamedeldeiaagnerrtnwlnnfyfggdhgvpdsvarsgglkklvginlegidarevnsiklfddthgrpiyvrvgkngpylerlvagdtgeptpqranlsdsitpdeltlqvaeelfat >8d0b_A: title=HUMAN CST-DNA POLYMERASE ALPHA/PRIMASE PREINITIATION COMPLEX BOUND TO 4XTEL-FOLDBACK TEMPLATE organism=HOMO SAPIENS DNA sequence DA(H14) DT(H13) DT(H12) DG(H11) DG(H10) DG(H9) DA(H8) DT(H7) DT(H6) DG(H5) DT(H1) DA(H2) DG(H3) DG(H4):DG(H5) chainA (849) ARG926 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (851) CYS928 0 0 0 0 0 0 0 0 0 0 0 6 0 0 (872) TYR949 0 0 0 0 0 0 0 0 0 0 0 21 0 0 (874) GLU951 0 0 0 0 0 0 0 0 0 0 9 3 0 0 (898) ARG975 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (902) SER979 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (904) ASN981 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (906) TYR983 0 0 0 0 0 0 0 0 0 0 1 3 0 0 (908) CYS985 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (910) ARG987 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (958) PHE1035 0 0 0 0 0 17 0 0 0 0 0 0 0 0 (997) ARG1074 0 0 0 0 0 7 3 0 0 0 0 0 0 0 (999) LEU1076 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (1006) GLU1083 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (1008) VAL1085 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (1043) GLN1120 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (1047) PRO1124 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (1076) LYS1164 0 0 0 0 0 0 0 0 0 0 0 0 11 0 (1079) LYS1167 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (1087) ARG1175 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (1089) GLN1177 0 0 0 23 0 0 0 0 0 0 0 0 0 0 (1091) PHE1179 0 0 0 13 0 0 0 0 0 0 0 0 0 0 (1105) ARG1193 0 0 0 4 6 5 0 0 0 0 0 0 0 0 (1107) ARG1195 0 0 0 0 0 6 8 0 0 0 0 0 0 0 prot.sequence psseqawledaqvfiqktlcpavkepnvqltplvidcvktvwlsqgrnqgstlplsysfvsvqdlkthqrlpccshlswsssayqawaqeagpngnplpreqllllgtltdlsadleqecrngslyvrdntgvlscelidldlswlghlflfprwsylpparwnssgeghlelwdapvpvfpltispgpvtpipvlypesascllrlrnklrgvqrnlagslvrlsalvkskqkayfilslgrshpavthvsiivqvpaqlvwhralrpgtayvltelrvskirgqrqhvwmtsqssrllllkpecvqevrysrllsysgavtgvlnepaglyeldgqlglclayqqfrglrrvmrpgvclqlqdvhllqsvgggtrrpvlapclrgavllqsfsrqkpgahssrqaygaslyeqlvwerqlglplylwatkaleelacklcphvlrhhqflqhsspgspslglqllaptldllappgspvrnahneileephhcplqkytrlqtpssfptlatlkeegqrkawasfdpkallplpeasylpscqlnrrlawswlcllpsafcpaqvllgvlvasshkgclqlrdqsgslpclllakhsqplsdprligclvraerfqliverdvrssfpswkelsmpgfiqkqqarvyvqffladalilpvprpgqsrlfllchkealmkrnfcvppgaspevpkpalsfyvlgswlggtqrkegtgwglpepqgnddndqkvhliffgssvrwfeflhpgqvyrlvapgpatpmlfekdgsscisrrplelagcascltvqdnwtlelessqdiqdvldankslpessltdllsdnftdslvsfsaeilsrtlcepRrCvkltvaletaecefpphldvYiEdphlppslgllpgarvhfsqlekRvsrShNvYcCfRsstyvqvlsfppettisvplphiylaellqggqspfqataschivsvFslqlfwvcayctsicrqgkctrlgstcptqtaisqaiiRlLvedgtaEaVvtcrnhhvaaalglcprewaslldfvqvpgrvvlQfagPepmtmflwtlctspsvlrpivlsfelerKpsKivpleppRlQrFqcgelpflthvnpRlRlsclsires >8d0b_ABF:"Winged_helix"_DNA-binding_domain;Nucleic_acid-binding_proteins;Ribonuclease_H-like;DNA/RNA_polymerases;Zinc_finger_domain_of_DNA_polymerase-alpha; title=HUMAN CST-DNA POLYMERASE ALPHA/PRIMASE PREINITIATION COMPLEX BOUND TO 4XTEL-FOLDBACK TEMPLATE organism=HOMO SAPIENS DNA sequence DA(H14) DT(H13) DT(H12) DG(H11) DG(H10) DG(H9) DA(H8) DT(H7) DT(H6) DG(H5) DT(H1) DA(H2) DG(H3) DG(H4):DG(H5) chainA (849) ARG926 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (851) CYS928 0 0 0 0 0 0 0 0 0 0 0 6 0 0 (872) TYR949 0 0 0 0 0 0 0 0 0 0 0 21 0 0 (874) GLU951 0 0 0 0 0 0 0 0 0 0 9 3 0 0 (898) ARG975 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (902) SER979 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (904) ASN981 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (906) TYR983 0 0 0 0 0 0 0 0 0 0 1 3 0 0 (908) CYS985 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (910) ARG987 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (958) PHE1035 0 0 0 0 0 17 0 0 0 0 0 0 0 0 (997) ARG1074 0 0 0 0 0 7 3 0 0 0 0 0 0 0 (999) LEU1076 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (1006) GLU1083 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (1008) VAL1085 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (1043) GLN1120 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (1047) PRO1124 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (1076) LYS1164 0 0 0 0 0 0 0 0 0 0 0 0 11 0 (1079) LYS1167 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (1087) ARG1175 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (1089) GLN1177 0 0 0 23 0 0 0 0 0 0 0 0 0 0 (1091) PHE1179 0 0 0 13 0 0 0 0 0 0 0 0 0 0 (1105) ARG1193 0 0 0 4 6 5 0 0 0 0 0 0 0 0 (1107) ARG1195 0 0 0 0 0 6 8 0 0 0 0 0 0 0 chainB ( 18) LEU24 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 83) TRP89 49 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (231) GLN554 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (330) VAL653 0 0 0 0 0 0 0 6 3 0 0 0 0 0 (331) CYS654 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (332) LYS655 0 0 0 0 0 0 0 0 1 1 0 0 0 1 (349) LYS672 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence psseqawledaqvfiqktlcpavkepnvqltplvidcvktvwlsqgrnqgstlplsysfvsvqdlkthqrlpccshlswsssayqawaqeagpngnplpreqllllgtltdlsadleqecrngslyvrdntgvlscelidldlswlghlflfprwsylpparwnssgeghlelwdapvpvfpltispgpvtpipvlypesascllrlrnklrgvqrnlagslvrlsalvkskqkayfilslgrshpavthvsiivqvpaqlvwhralrpgtayvltelrvskirgqrqhvwmtsqssrllllkpecvqevrysrllsysgavtgvlnepaglyeldgqlglclayqqfrglrrvmrpgvclqlqdvhllqsvgggtrrpvlapclrgavllqsfsrqkpgahssrqaygaslyeqlvwerqlglplylwatkaleelacklcphvlrhhqflqhsspgspslglqllaptldllappgspvrnahneileephhcplqkytrlqtpssfptlatlkeegqrkawasfdpkallplpeasylpscqlnrrlawswlcllpsafcpaqvllgvlvasshkgclqlrdqsgslpclllakhsqplsdprligclvraerfqliverdvrssfpswkelsmpgfiqkqqarvyvqffladalilpvprpgqsrlfllchkealmkrnfcvppgaspevpkpalsfyvlgswlggtqrkegtgwglpepqgnddndqkvhliffgssvrwfeflhpgqvyrlvapgpatpmlfekdgsscisrrplelagcascltvqdnwtlelessqdiqdvldankslpessltdllsdnftdslvsfsaeilsrtlcepRrCvkltvaletaecefpphldvYiEdphlppslgllpgarvhfsqlekRvsrShNvYcCfRsstyvqvlsfppettisvplphiylaellqggqspfqataschivsvFslqlfwvcayctsicrqgkctrlgstcptqtaisqaiiRlLvedgtaEaVvtcrnhhvaaalglcprewaslldfvqvpgrvvlQfagPepmtmflwtlctspsvlrpivlsfelerKpsKivpleppRlQrFqcgelpflthvnpRlRlsclsires/rceeetpsllwgldpvfLafaklyirdildmkesrqvpgvflynghpikqvdvlgtvigvrerdaFysygvddstgvincicWkklntesvsaapsaarelsltsqlkklqetieqktkieigdtirvrgsirtYreerEiHattyykvddpvwniqiarmlelptiyrkvydqpfhssalekeealsnpgaldlpsltsllsekakeflmenrvqsfyqqelemvesllslanqpvihsassdqvnfkkdttskaihsifknaiqllqekglvfqkddgfdnlyyvtredkdlhrkihriiqqdcqkpnhmekgchflhilacarlsirpglseavlqqvlelledqsdivstmehyytaf/vdsshlplvkgadeeqvfhfywldayedqynqpgvvflfgkvwiesaethvsccvmvkniertlyflpremkidlntgketgtpismkdvyeefdekiatkykimkfkskpveknyafeipdvpekseylevkysaempqlpqdlkgetfshvfgtntsslelflmnrkikgpcwlevkspqllnqpvswckveamalkpdlvnvikdvsppplvvmafsmktmqnaknhQneiiamaalvhhsfaldkaapkppfqshfcvvskpkdcifpyafkeviekknvkvevaatertllgfflakvhkidpdiivghniygfelevllqrinVCKaphwskigrlkrsnmpKlggrsgfgernatcgrmicdveisakelircksyhlselvqqilktervvipmeniqnmysessqllyllehtwkdakfilqimcelnvlplalqitniagnimsrtlmggrserneflllhafyennyivpdkqglvldpkvgfydkfillldfnslypsiiqefnicfttvqrvaseaqkvtedgeqeqipelpdpslemgilpreirklverrkqvkqlmkqqdlnpdlilqydirqkalkltansmygclgfsysrfyakplaalvtykgreilmhtkemvqkmnleviygdtdsimintnstnleevfklgnkvksevnklyklleididgvfksllllkkkkyaalvveptsdgnyvtkqelkqltdeekyrdcerfkcpcptcgteniydnvfdgsgtdmepslyrcsnidckaspltftvqlsnklimdirrfikkyydgwliceeptcrnrtrhlplqfsrtgplcpacmkatlqpeysdkslytqlcfyryifdaecaleklttdhekdklkkqfftpkvlqdyrklkntaeqflsrsgysevnlsklfagcavks >8d0b_B:"Winged_helix"_DNA-binding_domain;Nucleic_acid-binding_proteins; title=HUMAN CST-DNA POLYMERASE ALPHA/PRIMASE PREINITIATION COMPLEX BOUND TO 4XTEL-FOLDBACK TEMPLATE organism=HOMO SAPIENS DNA sequence DA(H14) DT(H13) DT(H12) DG(H11) DG(H10) DG(H9) DA(H8) DT(H7) DT(H6) DG(H5) DT(H1) DA(H2) DG(H3) DG(H4):DG(H5) chainB ( 18) LEU24 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 83) TRP89 49 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rceeetpsllwgldpvfLafaklyirdildmkesrqvpgvflynghpikqvdvlgtvigvrerdaFysygvddstgvincicWkklntesvsaapsaarelsltsqlkklqetieqktkieigdtirvrgsirtYreerEiHattyykvddpvwniqiarmlelptiyrkvydqpfhssalekeealsnpgaldlpsltsllsekakeflmenrvqsfyqqelemvesllslanqpvihsassdqvnfkkdttskaihsifknaiqllqekglvfqkddgfdnlyyvtredkdlhrkihriiqqdcqkpnhmekgchflhilacarlsirpglseavlqqvlelledqsdivstmehyytaf >8d0b_F:Ribonuclease_H-like;DNA/RNA_polymerases;Zinc_finger_domain_of_DNA_polymerase-alpha; title=HUMAN CST-DNA POLYMERASE ALPHA/PRIMASE PREINITIATION COMPLEX BOUND TO 4XTEL-FOLDBACK TEMPLATE organism=HOMO SAPIENS DNA sequence DA(H14) DT(H13) DT(H12) DG(H11) DG(H10) DG(H9) DA(H8) DT(H7) DT(H6) DG(H5) DT(H1) DA(H2) DG(H3) DG(H4):DG(H5) chainF (231) GLN554 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (330) VAL653 0 0 0 0 0 0 0 6 3 0 0 0 0 0 (331) CYS654 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (332) LYS655 0 0 0 0 0 0 0 0 1 1 0 0 0 1 (349) LYS672 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence vdsshlplvkgadeeqvfhfywldayedqynqpgvvflfgkvwiesaethvsccvmvkniertlyflpremkidlntgketgtpismkdvyeefdekiatkykimkfkskpveknyafeipdvpekseylevkysaempqlpqdlkgetfshvfgtntsslelflmnrkikgpcwlevkspqllnqpvswckveamalkpdlvnvikdvsppplvvmafsmktmqnaknhQneiiamaalvhhsfaldkaapkppfqshfcvvskpkdcifpyafkeviekknvkvevaatertllgfflakvhkidpdiivghniygfelevllqrinVCKaphwskigrlkrsnmpKlggrsgfgernatcgrmicdveisakelircksyhlselvqqilktervvipmeniqnmysessqllyllehtwkdakfilqimcelnvlplalqitniagnimsrtlmggrserneflllhafyennyivpdkqglvldpkvgfydkfillldfnslypsiiqefnicfttvqrvaseaqkvtedgeqeqipelpdpslemgilpreirklverrkqvkqlmkqqdlnpdlilqydirqkalkltansmygclgfsysrfyakplaalvtykgreilmhtkemvqkmnleviygdtdsimintnstnleevfklgnkvksevnklyklleididgvfksllllkkkkyaalvveptsdgnyvtkqelkqltdeekyrdcerfkcpcptcgteniydnvfdgsgtdmepslyrcsnidckaspltftvqlsnklimdirrfikkyydgwliceeptcrnrtrhlplqfsrtgplcpacmkatlqpeysdkslytqlcfyryifdaecaleklttdhekdklkkqfftpkvlqdyrklkntaeqflsrsgysevnlsklfagcavks >8d0k_ABCDEF:"Winged_helix"_DNA-binding_domain;Nucleic_acid-binding_proteins;Prim-pol_domain;PriB_N-terminal_domain-like;Ribonuclease_H-like;DNA/RNA_polymerases;Zinc_finger_domain_of_DNA_polymerase-alpha; title=HUMAN CST-DNA POLYMERASE ALPHA/PRIMASE PREINITIATION COMPLEX BOUND TO 4XTEL-FOLDBACK TEMPLATE - PRIM2C ADVANCED PIC organism=HOMO SAPIENS DNA sequence DT(H19) DT(H18) DG(H17) DG(H16) DG(H15) DA(H14) DT(H13) DT(H12) DG(H11) DG(H10) DG(H9) DA(H8) DT(H7) DT(H6) DG(H5) DT(H1) DA(H2) DG(H3) DG(H4):DG(H5) chainA (849) ARG926 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 (851) CYS928 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (872) TYR949 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 (874) GLU951 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 (898) ARG975 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (902) SER979 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 (904) ASN981 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (906) TYR983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (910) ARG987 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (958) PHE1035 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 (959) SER1036 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (997) ARG1074 0 0 0 0 0 0 0 0 0 0 10 4 7 0 0 0 0 0 0 (999) LEU1076 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (1006) GLU1083 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (1008) VAL1085 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (1047) PRO1124 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (1074) GLU1162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (1076) LYS1164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 (1079) LYS1167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 (1087) ARG1175 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (1089) GLN1177 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 (1091) PHE1179 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 (1105) ARG1193 0 0 0 0 0 0 0 0 3 5 5 0 0 0 0 0 0 0 0 (1107) ARG1195 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 chainB ( 18) LEU24 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 61) ARG67 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ARG69 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) PHE72 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) TRP89 0 0 0 0 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) LYS91 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (135) TYR141 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD ( 52) ILE53 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) TYR54 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ARG56 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (323) TYR347 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) ARG350 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) HIS351 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) GLU356 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (231) GLN554 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (330) VAL653 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (332) LYS655 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (349) LYS672 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence psseqawledaqvfiqktlcpavkepnvqltplvidcvktvwlsqgrnqgstlplsysfvsvqdlkthqrlpccshlswsssayqawaqeagpngnplpreqllllgtltdlsadleqecrngslyvrdntgvlscelidldlswlghlflfprwsylpparwnssgeghlelwdapvpvfpltispgpvtpipvlypesascllrlrnklrgvqrnlagslvrlsalvkskqkayfilslgrshpavthvsiivqvpaqlvwhralrpgtayvltelrvskirgqrqhvwmtsqssrllllkpecvqevrysrllsysgavtgvlnepaglyeldgqlglclayqqfrglrrvmrpgvclqlqdvhllqsvgggtrrpvlapclrgavllqsfsrqkpgahssrqaygaslyeqlvwerqlglplylwatkaleelacklcphvlrhhqflqhsspgspslglqllaptldllappgspvrnahneileephhcplqkytrlqtpssfptlatlkeegqrkawasfdpkallplpeasylpscqlnrrlawswlcllpsafcpaqvllgvlvasshkgclqlrdqsgslpclllakhsqplsdprligclvraerfqliverdvrssfpswkelsmpgfiqkqqarvyvqffladalilpvprpgqsrlfllchkealmkrnfcvppgaspevpkpalsfyvlgswlggtqrkegtgwglpepqgnddndqkvhliffgssvrwfeflhpgqvyrlvapgpatpmlfekdgsscisrrplelagcascltvqdnwtlelessqdiqdvldankslpessltdllsdnftdslvsfsaeilsrtlcepRrCvkltvaletaecefpphldvYiEdphlppslgllpgarvhfsqlekRvsrShNvYccfRsstyvqvlsfppettisvplphiylaellqggqspfqataschivsvFSlqlfwvcayctsicrqgkctrlgstcptqtaisqaiiRlLvedgtaEaVvtcrnhhvaaalglcprewaslldfvqvpgrvvlqfagPepmtmflwtlctspsvlrpivlsfelErKpsKivpleppRlQrFqcgelpflthvnpRlRlsclsires/rceeetpsllwgldpvfLafaklyirdildmkesrqvpgvflynghpikqvdvlgtvigvReRdaFysygvddstgvincicWkKlntesvsaapsaarelsltsqlkklqetieqktkieigdtirvrgsirtYreereihattyykvddpvwniqiarmlelptiyrkvydqpfhssalekeealsnpgaldlpsltsllsekakeflmenrvqsfyqqelemvesllslanqpvihsassdqvnfkkdttskaihsifknaiqllqekglvfqkddgfdnlyyvtredkdlhrkihriiqqdcqkpnhmekgchflhilacarlsirpglseavlqqvlelledqsdivstmehyytaf/lpkpgtyylpwevsagqVpdgstlrtfgrlclydmiqsrvtlmaqhgsdqhqvlvctklvEpFhaQvgslyivlgelqhqqdRgSvvkarvltcvegmnlplleqaireqrlykqerggsq/etfdptelpellklyyrrlfpysqyyrwlnyggviknyfqhrefsftlkddIYiRyqsfnnqsdlekemqkmnpykidigavyshrpnqhntvklgafqaqekelvfdidmtdyddvrrccssadicpkcwtlmtmairiidralkedfgfkhrlwvysgrrgvhcwvcdesvrklssavrsgiveylslvkggqdvkkkvhlsekihpfirksiniikkyfeeyalvnqdilenkeswdkilalvpetihdelqqsfqkshnslqrwehlkkvasryqnnikndkygpwleweimlqycfprldinvskginhllkspfsvhpktgrisvpidlqkvdqfdpftvptisficreldaistneeekeeneaesdvkhrtrdykktslapyvkvfehflenldksrkgellkksdlqkdf/dqrnasyphclqfylqppsenisliefenlaidrvkllksvenlgvsyvkgteqyqskleselrklkfsyrenledeyeprrrdhishfilrlaycqseelrrwfiqqemdllrfrfsilpkdkiqdflkdsqlqfeaisdeektlreqeivasspslsglklgfesiykipfadaldlfrgrkvyledgfayvplkdivaiilnefraklskalaltarslpavqsderlqpllnhlshsgnvgkisldqidllstksfppcmrqlhkalrenhhlrhggrMqyglflkgigltleqalqfwkqefikgkmdpdkfdkgysYniRHsfgkEgkrtdytpfsclkiilsnppsqgdyhgcpfrhsdpellkqklqsykispggisqildlvkgthyqvacqkyfemihnvddcgfslnhpnqffcesqril/vdsshlplvkgadeeqvfhfywldayedqynqpgvvflfgkvwiesaethvsccvmvkniertlyflpremkidlntgketgtpismkdvyeefdekiatkykimkfkskpveknyafeipdvpekseylevkysaempqlpqdlkgetfshvfgtntsslelflmnrkikgpcwlevkspqllnqpvswckveamalkpdlvnvikdvsppplvvmafsmktmqnaknhQneiiamaalvhhsfaldkaapkppfqshfcvvskpkdcifpyafkeviekknvkvevaatertllgfflakvhkidpdiivghniygfelevllqrinVcKaphwskigrlkrsnmpKlggrsgfgernatcgrmicdveisakelircksyhlselvqqilktervvipmeniqnmysessqllyllehtwkdakfilqimcelnvlplalqitniagnimsrtlmggrserneflllhafyennyivpdkqglvldpkvgfydkfillldfnslypsiiqefnicfttvqrvaseaqkvtedgeqeqipelpdpslemgilpreirklverrkqvkqlmkqqdlnpdlilqydirqkalkltansmygclgfsysrfyakplaalvtykgreilmhtkemvqkmnleviygdtdsimintnstnleevfklgnkvksevnklyklleididgvfksllllkkkkyaalvveptsdgnyvtkqelkqltdeekyrdcerfkcpcptcgteniydnvfdgsgtdmepslyrcsnidckaspltftvqlsnklimdirrfikkyydgwliceeptcrnrtrhlplqfsrtgplcpacmkatlqpeysdkslytqlcfyryifdaecaleklttdhekdklkkqfftpkvlqdyrklkntaeqflsrsgysevnlsklfagcavks >8d0k_D:Prim-pol_domain; title=HUMAN CST-DNA POLYMERASE ALPHA/PRIMASE PREINITIATION COMPLEX BOUND TO 4XTEL-FOLDBACK TEMPLATE - PRIM2C ADVANCED PIC organism=HOMO SAPIENS DNA sequence DT(H19) DT(H18) DG(H17) DG(H16) DG(H15) DA(H14) DT(H13) DT(H12) DG(H11) DG(H10) DG(H9) DA(H8) DT(H7) DT(H6) DG(H5) DT(H1) DA(H2) DG(H3) DG(H4):DG(H5) chainD ( 52) ILE53 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) TYR54 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ARG56 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence etfdptelpellklyyrrlfpysqyyrwlnyggviknyfqhrefsftlkddIYiRyqsfnnqsdlekemqkmnpykidigavyshrpnqhntvklgafqaqekelvfdidmtdyddvrrccssadicpkcwtlmtmairiidralkedfgfkhrlwvysgrrgvhcwvcdesvrklssavrsgiveylslvkggqdvkkkvhlsekihpfirksiniikkyfeeyalvnqdilenkeswdkilalvpetihdelqqsfqkshnslqrwehlkkvasryqnnikndkygpwleweimlqycfprldinvskginhllkspfsvhpktgrisvpidlqkvdqfdpftvptisficreldaistneeekeeneaesdvkhrtrdykktslapyvkvfehflenldksrkgellkksdlqkdf >8d0k_E:PriB_N-terminal_domain-like; title=HUMAN CST-DNA POLYMERASE ALPHA/PRIMASE PREINITIATION COMPLEX BOUND TO 4XTEL-FOLDBACK TEMPLATE - PRIM2C ADVANCED PIC organism=HOMO SAPIENS DNA sequence DT(H19) DT(H18) DG(H17) DG(H16) DG(H15) DA(H14) DT(H13) DT(H12) DG(H11) DG(H10) DG(H9) DA(H8) DT(H7) DT(H6) DG(H5) DT(H1) DA(H2) DG(H3) DG(H4):DG(H5) chainE (323) TYR347 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) ARG350 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (327) HIS351 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) GLU356 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dqrnasyphclqfylqppsenisliefenlaidrvkllksvenlgvsyvkgteqyqskleselrklkfsyrenledeyeprrrdhishfilrlaycqseelrrwfiqqemdllrfrfsilpkdkiqdflkdsqlqfeaisdeektlreqeivasspslsglklgfesiykipfadaldlfrgrkvyledgfayvplkdivaiilnefraklskalaltarslpavqsderlqpllnhlshsgnvgkisldqidllstksfppcmrqlhkalrenhhlrhggrMqyglflkgigltleqalqfwkqefikgkmdpdkfdkgysYniRHsfgkEgkrtdytpfsclkiilsnppsqgdyhgcpfrhsdpellkqklqsykispggisqildlvkgthyqvacqkyfemihnvddcgfslnhpnqffcesqril >8d0k_F:Ribonuclease_H-like;DNA/RNA_polymerases;Zinc_finger_domain_of_DNA_polymerase-alpha; title=HUMAN CST-DNA POLYMERASE ALPHA/PRIMASE PREINITIATION COMPLEX BOUND TO 4XTEL-FOLDBACK TEMPLATE - PRIM2C ADVANCED PIC organism=HOMO SAPIENS DNA sequence DT(H19) DT(H18) DG(H17) DG(H16) DG(H15) DA(H14) DT(H13) DT(H12) DG(H11) DG(H10) DG(H9) DA(H8) DT(H7) DT(H6) DG(H5) DT(H1) DA(H2) DG(H3) DG(H4):DG(H5) chainF (231) GLN554 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (330) VAL653 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (332) LYS655 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (349) LYS672 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence vdsshlplvkgadeeqvfhfywldayedqynqpgvvflfgkvwiesaethvsccvmvkniertlyflpremkidlntgketgtpismkdvyeefdekiatkykimkfkskpveknyafeipdvpekseylevkysaempqlpqdlkgetfshvfgtntsslelflmnrkikgpcwlevkspqllnqpvswckveamalkpdlvnvikdvsppplvvmafsmktmqnaknhQneiiamaalvhhsfaldkaapkppfqshfcvvskpkdcifpyafkeviekknvkvevaatertllgfflakvhkidpdiivghniygfelevllqrinVcKaphwskigrlkrsnmpKlggrsgfgernatcgrmicdveisakelircksyhlselvqqilktervvipmeniqnmysessqllyllehtwkdakfilqimcelnvlplalqitniagnimsrtlmggrserneflllhafyennyivpdkqglvldpkvgfydkfillldfnslypsiiqefnicfttvqrvaseaqkvtedgeqeqipelpdpslemgilpreirklverrkqvkqlmkqqdlnpdlilqydirqkalkltansmygclgfsysrfyakplaalvtykgreilmhtkemvqkmnleviygdtdsimintnstnleevfklgnkvksevnklyklleididgvfksllllkkkkyaalvveptsdgnyvtkqelkqltdeekyrdcerfkcpcptcgteniydnvfdgsgtdmepslyrcsnidckaspltftvqlsnklimdirrfikkyydgwliceeptcrnrtrhlplqfsrtgplcpacmkatlqpeysdkslytqlcfyryifdaecaleklttdhekdklkkqfftpkvlqdyrklkntaeqflsrsgysevnlsklfagcavks >8d33_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HUMAN MITOCHONDRIAL DNA POLYMERASE GAMMA TERNARY COMPLEX WITH GC BASEPAIR organism=? DNA sequence DA(P3):DT(T26) DA(P4):DT(T25) DA(P5):DT(T24) DA(P6):DT(T23) DC(P7):DG(T22) DG(P8):DC(T21) DA(P9):DT(T20) DC(P10):DG(T19) DG(P11):DC(T18) DG(P12):DC(T17) DC(P13):DG(T16) DC(P14):DG(T15) DA(P15):DT(T14) DG(P16):DC(T13) DT(P17):DA(T12) DG(P18):DC(T11) DC(P19):DG(T10) DC(P20):DG(T9) DA(P21):DT(T8) DT(P22):DA(T7) DA(P23):DT(T6) DC(P24):DG(T5) chainA (593) ASN803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 (643) ARG853 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 (651) THR861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (841) GLN1102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 prot.sequence lrhnpldiqmlsrglheqifgqggempgeaavrrsvehlqkhglwgqpavplpdvelrlpplygdnldqhfrllaqkqslpyleaanlllqaqlppkppawawaegwtrygpegeavpvaipeeralvfdvevclaegtcptlavaispsawyswcsqrlveeryswtsqlspadliplevptdwqeqlvvghnvsfdrahireqyliqgsrmrfldtmsmhmaisglssfqrslwiaakisswdwldissvnslaevhrlyvggpplekeprelfvkgtmkdirenfqdlmqycaqdvwathevfqqqlplflercphpvtlagmlemgvsylpvnqnwerylaeaqgtyeelqremkkslmdlandacqllsgerykedpwlwdlewdlqefkqkklgpcseeeefqqdvmaraclqklkgttellpkrpqhlpghpgwyrklcprlddpawtpgpsllslqmrvtpklmaltwdgfplhyserhgwgylvpgrrdnlvvcpyraieslyrkhcleqpsyhhgngpyndvdipgcwffklphkdgnscnvgspfakdflpkmedgtlqagpggasgpraleinkmisfwrNahkrissqmvvwlprsalpravirhpdydeeglygailpqvvtagtitrRaveptwlTasnarpdrvgselkamvqappgytlvgadvdsqelwiaavlgdahfagmhgctafgwmtlqgrksrgtdlhsktattvgisrehakifnygriygagqpfaerllmqfnhrltqqeaaekaqqmyaatkglrwyrlwkggtesemfnklesiatsdiprtpvlgccisralepsavqeefmtsrvnwvvQssavdylhlmlvamkwlfeefaidgrfcisihdevrylvreedryraalalqitnlltrcmfayklglndlpqsvaffsavdidrclrkevtmdcktpsnptgmerrygipqgealdiyqiieltkgslekrs >8d37_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HUMAN MITOCHONDRIAL DNA POLYMERASE GAMMA TERNARY COMPLEX WITH GT BASEPAIR IN REPLICATION CONFORMER organism=? DNA sequence DG(T5):DT(P24) DT(T6):DA(P23) DA(T7):DT(P22) DT(T8):DA(P21) DG(T9):DC(P20) DG(T10):DC(P19) DC(T11):DG(P18) DA(T12):DT(P17) DC(T13):DG(P16) DT(T14):DA(P15) DG(T15):DC(P14) DG(T16):DC(P13) DC(T17):DG(P12) DC(T18):DG(P11) DG(T19):DC(P10) DT(T20):DA(P9) DC(T21):DG(P8) DG(T22):DC(P7) DT(T23):DA(P6) DT(T24):DA(P5) DT(T25):DA(P4) DT(T26):DA(P3) chainA (593) ASN803 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (597) ARG807 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (643) ARG853 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (651) THR861 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (841) GLN1102 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (873) HIS1134 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lrhnpldiqmlsrglheqifgqggempgeaavrrsvehlqkhglwgqpavplpdvelrlpplygdnldqhfrllaqkqslpyleaanlllqaqlppkppawawaegwtrygpegeavpvaipeeralvfdvevclaegtcptlavaispsawyswcsqrlveeryswtsqlspadliplevptdwqeqlvvghnvsfdrahireqyliqgsrmrfldtmsmhmaisglssfqrslwiaakisswdwldissvnslaevhrlyvggpplekeprelfvkgtmkdirenfqdlmqycaqdvwathevfqqqlplflercphpvtlagmlemgvsylpvnqnwerylaeaqgtyeelqremkkslmdlandacqllsgerykedpwlwdlewdlqefkqkklgpcseeeefqqdvmaraclqklkgttellpkrpqhlpghpgwyrklcprlddpawtpgpsllslqmrvtpklmaltwdgfplhyserhgwgylvpgrrdnlvvcpyraieslyrkhcleqpsyhhgngpyndvdipgcwffklphkdgnscnvgspfakdflpkmedgtlqagpggasgpraleinkmisfwrNahkRissqmvvwlprsalpravirhpdydeeglygailpqvvtagtitrRaveptwlTasnarpdrvgselkamvqappgytlvgadvdsqelwiaavlgdahfagmhgctafgwmtlqgrksrgtdlhsktattvgisrehakifnygriygagqpfaerllmqfnhrltqqeaaekaqqmyaatkglrwyrlwkggtesemfnklesiatsdiprtpvlgccisralepsavqeefmtsrvnwvvQssavdylhlmlvamkwlfeefaidgrfcisiHdevrylvreedryraalalqitnlltrcmfayklglndlpqsvaffsavdidrclrkevtmdcktpsnptgmerrygipqgealdiyqiieltkgslekrs >8d3l_ACDEF: title=TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUND TO A PAM/PAM PRESPACER organism=? DNA sequence DC(H1):DG(G22) DG(H2):DC(G21) DT(H3):DA(G20) DA(H4):DT(G19) DG(H5):DC(G18) DC(H6):DG(G17) DT(H7):DA(G16) DG(H8):DC(G15) DA(H9):DT(G14) DG(H10):DC(G13) DG(H11):DC(G12) DA(H12):DT(G11) DC(H13):DG(G10) DC(H14):DG(G9) DA(H15):DT(G8) DC(H16):DG(G7) DC(H17):DG(G6) DA(H18):DT(G5) DG(H19):DC(G4) DA(H20):DT(G3) DA(H21):DT(G2) DC(H22):DG(G1) chainA ( 14) ASP14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 ( 49) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 chainC ( 14) ASP14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR49 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) LYS72 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 13) THR11 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 22) LEU20 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 23) ARG21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainF ( 13) THR11 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU20 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgYtgaspalmgycaernisitfltkngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflwk/mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgYtgaspalmgycaernisitfltKngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflwk/mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgYtgaspalmgycaernisitfltKngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflw/gsmlvlitydvqTssmggtkrLRkvakacqnygqrvqnsvfecivdstqltslkleltslideekdslriyrlgnnyktkvehigakpsidledplif/gsmlvlitydvqTssmggtkrLrkvakacqnygqrvqnsvfecivdstqltslkleltslideekdslriyrlgnnyktkvehigakpsidledplif >8d3l_BJ: title=TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUND TO A PAM/PAM PRESPACER organism=? DNA sequence DG(G1) DT(G2) DT(G3) DC(G4) DT(G5) DG(G6) DG(G7) DT(G8) DG(G9) DG(G10) DT(G11) DC(G12) DC(G13) DT(G14) DC(G15) DA(G16) DG(G17) DC(G18) DT(G19) DA(G20) DC(G21) DG(G22) DT(G23) DT(G24) DT(G25) DT(G26) DT(G27) DT(G28) DG(G29) DA(G30) DA(G31) DT(G32) DT(G33) chainB chainJ ( 9) MET11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 ( 11) SER13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 ( 14) GLN16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 15) HIS17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 1 0 0 ( 18) PHE20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 1 0 ( 22) GLN24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 ( 26) ILE28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 32) TRP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 6 0 0 0 ( 35) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 37) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ( 38) THR40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 42) GLN44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 ( 45) HIS47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (111) LYS113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (113) LYS115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (117) GLU119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 (118) ASP120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (187) PHE189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (192) SER194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 prot.sequence mkkllntlyvtqpdtylsldgdnvvllkeqeklgrlplhnleaivgfgytgaspalmgycaernisitfltkngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflw/sneedrylMlSglQHfqFckrQwalIhieqqWeeNvRTiegQhlHkkadqpfmkekrgskltvrampiqsknlqisgicdvvefvqdsegielsgvsgsykafpveykrgKpKkgdEDivqlvaqamcleemlvcridkgylfyneikhrvevpitdalrdkvvqmakemhhyyenrhtpkvktgpFcnncSlqsiclpklmnkrsvkryiegrlse >8d3l_C: title=TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUND TO A PAM/PAM PRESPACER organism=? DNA sequence DG(G1):DC(H22) DT(G2):DA(H21) DT(G3):DA(H20) DC(G4):DG(H19) DT(G5):DA(H18) DG(G6):DC(H17) DG(G7):DC(H16) DT(G8):DA(H15) DG(G9):DC(H14) DG(G10):DC(H13) DT(G11):DA(H12) DC(G12):DG(H11) DC(G13):DG(H10) DT(G14):DA(H9) DC(G15):DG(H8) DA(G16):DT(H7) DG(G17):DC(H6) DC(G18):DG(H5) DT(G19):DA(H4) DA(G20):DT(H3) DC(G21):DG(H2) DG(G22):DC(H1) chainC ( 14) ASP14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 49) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 ( 72) LYS72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgYtgaspalmgycaernisitfltKngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflwk >8d3m_ACDEF: title=TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUND TO A PAM/PROCESSED PRESPACER organism=? DNA sequence DC(H1):DG(G22) DG(H2):DC(G21) DT(H3):DA(G20) DA(H4):DT(G19) DG(H5):DC(G18) DC(H6):DG(G17) DT(H7):DA(G16) DG(H8):DC(G15) DA(H9):DT(G14) DG(H10):DC(G13) DG(H11):DC(G12) DA(H12):DT(G11) DC(H13):DG(G10) DC(H14):DG(G9) DA(H15):DT(G8) DC(H16):DG(G7) DC(H17):DG(G6) DA(H18):DT(G5) DG(H19):DC(G4) DA(H20):DT(G3) DA(H21):DT(G2) DC(H22):DG(G1) chainA ( 14) ASP14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ( 49) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 chainC ( 14) ASP14 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR49 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 13) THR11 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 22) LEU20 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 ( 23) ARG21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 chainF ( 13) THR11 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU20 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG21 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgYtgaspalmgycaernisitfltkngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflwk/mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgYtgaspalmgycaernisitfltkngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflwk/mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgYtgaspalmgycaernisitfltkngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflw/gsmlvlitydvqTssmggtkrLRkvakacqnygqrvqnsvfecivdstqltslkleltslideekdslriyrlgnnyktkvehigakpsidledplif/gsmlvlitydvqTssmggtkrLRkvakacqnygqrvqnsvfecivdstqltslkleltslideekdslriyrlgnnyktkvehigakpsidledplif >8d3m_F:TTP0101/SSO1404-like; title=TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUND TO A PAM/PROCESSED PRESPACER organism=? DNA sequence DG(G1):DC(H22) DT(G2):DA(H21) DT(G3):DA(H20) DC(G4):DG(H19) DT(G5):DA(H18) DG(G6):DC(H17) DG(G7):DC(H16) DT(G8):DA(H15) DG(G9):DC(H14) DG(G10):DC(H13) DT(G11):DA(H12) DC(G12):DG(H11) DC(G13):DG(H10) DT(G14):DA(H9) DC(G15):DG(H8) DA(G16):DT(H7) DG(G17):DC(H6) DC(G18):DG(H5) DT(G19):DA(H4) DA(G20):DT(H3) DC(G21):DG(H2) DG(G22):DC(H1) chainF ( 13) THR11 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 22) LEU20 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 23) ARG21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 prot.sequence gsmlvlitydvqTssmggtkrLRkvakacqnygqrvqnsvfecivdstqltslkleltslideekdslriyrlgnnyktkvehigakpsidledplif >8d3p_A: title=TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUND TO HALF-SITE INTEGRATION INTERMEDIATE (HSI) organism=? DNA sequence DC(H1):DG(G22) DG(H2):DC(G21) DT(H3):DA(G20) DA(H4):DT(G19) DG(H5):DC(G18) DC(H6):DG(G17) DT(H7):DA(G16) DG(H8):DC(G15) DA(H9):DT(G14) DG(H10):DC(G13) DG(H11):DC(G12) DA(H12):DT(G11) DC(H13):DG(G10) DC(H14):DG(G9) DA(H15):DT(G8) DC(H16):DG(G7) DC(H17):DG(G6) DA(H18):DT(G5) DG(H19):DC(G4) DA(H21):DT(G2) DC(H22):DG(G1) chainA ( 14) ASP14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 49) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 prot.sequence mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgYtgaspalmgycaernisitfltkngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflwk >8d3p_ADEFI: title=TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUND TO HALF-SITE INTEGRATION INTERMEDIATE (HSI) organism=? DNA sequence DC(H1):DG(G22) DG(H2):DC(G21) DT(H3):DA(G20) DA(H4):DT(G19) DG(H5):DC(G18) DC(H6):DG(G17) DT(H7):DA(G16) DG(H8):DC(G15) DA(H9):DT(G14) DG(H10):DC(G13) DG(H11):DC(G12) DA(H12):DT(G11) DC(H13):DG(G10) DC(H14):DG(G9) DA(H15):DT(G8) DC(H16):DG(G7) DC(H17):DG(G6) DA(H18):DT(G5) DG(H19):DC(G4) DA(H21):DT(G2) DC(H22):DG(G1) chainA ( 14) ASP14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ( 49) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 chainD chainE ( 25) ARG21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 chainF ( 13) THR11 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 22) LEU20 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG21 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI prot.sequence mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgYtgaspalmgycaernisitfltkngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflwk/mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgYtgaspalmgycaernisitfltkngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflw/gagsmlvlitydvqtssmggtkrlRkvakacqnygqrvqnsvfecivdstqltslkleltslideekdslriyrlgnnyktkvehigakpsidledplif/gsmlvlitydvqTssmggtkrLRkvakacqnygqrvqnsvfecivdstqltslkleltslideekdslriyrlgnnyktkvehigakpsidledplif/asneedrylmlsGlqhfqfckRQwalihieqqweenvrtiegqhlhkkadqpfmkekrgskltvrampiqsknlqisgicdvvefvqdsegielsgvsgsykafpveykrgkpkkgdedivqlvaqamcleemlvcridkgylfyneikhrvevpitdalrdkvvqmakemhhyyenrhtpkvktgpfcnncslqsiclpklmnkrsvkryiegrlse >8d3p_BC: title=TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUND TO HALF-SITE INTEGRATION INTERMEDIATE (HSI) organism=? DNA sequence DC(g18):DC(k41) DT(g19):DC(k40) DA(g20):DT(k39) DC(g21):DA(k38) DG(g22):DA(k37) DT(g23):DA(k36) DT(g24):DA(k35) DT(g25):DG(k34) DT(g26):DC(k33) DT(g27):DG(k32) DT(g28):DA(k31) DG(g29):DC(k30) DT(g30):DA(k29) DC(g31):DG(k28) DG(g32):DG(k27) DC(g33):DC(k26) DA(g34):DG(k25) DC(g35):DG(k24) DT(g36):DA(k23) DC(g37):DG(k22) DT(g38):DA(k21) DT(g39):DA(k20) DC(g40):DG(k19) DA(g41):DT(k18) DT(g42):DA(k17) DG(g43):DC(k16) DG(g44):DC(k15) DG(g45):DC(k14) DT(g46):DA(k13) DG(g47):DC(k12) DC(g48):DG(k11) DG(g49):DC(k10) DT(g50):DA(k9) DG(g51):DC(k8) DG(g52):DC(k7) DA(g53):DT(k6) DT(g54):DA(k5) DT(g55):DA(k4) DG(g56):DC(k3) DA(g57):DT(k2) DA(g58):DT(k1) chainB (316) LYS312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainC ( 14) ASP14 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) THR71 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ASN73 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG75 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) ARG196 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (212) LEU212 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) ASN215 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ARG237 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ARG240 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) LEU245 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) MET248 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) MET284 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) ARG289 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) LYS290 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) LEU293 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gagsmkkllntlyvtqpdtylsldgdnvvllkeqeklgrlplhnleaivgfgytgaspalmgycaernisitfltkngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgeKmswglvpyvqalllarflrgdldeyppflw/mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgytgaspalmgycaernisitflTkNgRflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrRppkdnvnamlsfaytLlaNdvaaaletvgldayvgfmhqdRpgRaslaLdlMeelrglyadrfvlslinrkemtadgfykkengavlMtdeaRKtfLkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflwk >8d3q_ACDEF: title=TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUND TO A PAM/NOPAM PRESPACER organism=? DNA sequence DG(G1):DC(H22) DT(G2):DA(H21) DT(G3):DA(H20) DC(G4):DG(H19) DT(G5):DA(H18) DG(G6):DC(H17) DG(G7):DC(H16) DT(G8):DA(H15) DG(G9):DC(H14) DG(G10):DC(H13) DT(G11):DA(H12) DC(G12):DG(H11) DC(G13):DG(H10) DT(G14):DA(H9) DC(G15):DG(H8) DA(G16):DT(H7) DG(G17):DC(H6) DC(G18):DG(H5) DT(G19):DA(H4) DA(G20):DT(H3) DC(G21):DG(H2) DG(G22):DC(H1) chainA ( 14) ASP14 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) TYR49 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 14) ASP14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ( 49) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 chainD chainE ( 13) THR11 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 22) LEU20 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG21 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 13) THR11 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 22) LEU20 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 ( 23) ARG21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 prot.sequence mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgYtgaspalmgycaernisitfltkngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflwk/mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgYtgaspalmgycaernisitfltkngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflwk/mkkllntlyvtqpDtylsldgdnvvllkeqeklgrlplhnleaivgfgYtgaspalmgycaernisitfltkngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflw/gsmlvlitydvqTssmggtkrLRkvakacqnygqrvqnsvfecivdstqltslkleltslideekdslriyrlgnnyktkvehigakpsidledplif/gsmlvlitydvqTssmggtkrLRkvakacqnygqrvqnsvfecivdstqltslkleltslideekdslriyrlgnnyktkvehigakpsidledplif >8d3q_BJ: title=TYPE I-C CAS4-CAS1-CAS2 COMPLEX BOUND TO A PAM/NOPAM PRESPACER organism=? DNA sequence DG(G1) DT(G2) DT(G3) DC(G4) DT(G5) DG(G6) DG(G7) DT(G8) DG(G9) DG(G10) DT(G11) DC(G12) DC(G13) DT(G14) DC(G15) DA(G16) DG(G17) DC(G18) DT(G19) DA(G20) DC(G21) DG(G22) DT(G23) DT(G24) DT(G25) DT(G26) DT(G27) DT(G28) chainB chainJ ( 9) MET11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 ( 11) SER13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 ( 32) TRP34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 51) ILE80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 ( 82) ARG111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mkkllntlyvtqpdtylsldgdnvvllkeqeklgrlplhnleaivgfgytgaspalmgycaernisitfltkngrflarvvgesrgnvvlrktqyrisendqestkiarnfitgkvynskwmlermtrehplrvnveqfkatsqllsvmmqeirncdsleslrgwegqaainynkvfdqmilqqkeefafhgrsrrppkdnvnamlsfaytllandvaaaletvgldayvgfmhqdrpgraslaldlmeelrglyadrfvlslinrkemtadgfykkengavlmtdearktflkawqtkkqekithpylgekmswglvpyvqalllarflrgdldeyppflw/sneedrylMlSglqhfqfckrqwalihieqqWkltvrampiqsknlqisgIcdvvefvqdsegielsgvsgsykafpveykRgkpkkgdedivqlvaqamcleemlvcridkgylfyneikhrvevpitdalrdkvvqmakemhhyyenrhtpkvktgpfcnncslqsiclpklmnkrsvkryiegrlse >8d3r_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HUMAN MITOCHONDRIAL DNA POLYMERASE GAMMA TERNARY COMPLEX WITH GT BASEPAIR IN INTERMEDIATE CONFORMER organism=? DNA sequence DA(P3):DT(T26) DA(P4):DT(T25) DA(P5):DT(T24) DA(P6):DT(T23) DC(P7):DG(T22) DG(P8):DC(T21) DA(P9):DT(T20) DC(P10):DG(T19) DG(P11):DC(T18) DG(P12):DC(T17) DC(P13):DG(T16) DC(P14):DG(T15) DA(P15):DT(T14) DG(P16):DC(T13) DT(P17):DA(T12) DG(P18):DC(T11) DC(P19):DG(T10) DC(P20):DG(T9) DA(P21):DT(T8) DT(P22):DA(T7) DA(P23):DT(T6) DT(P24):DG(T5) chainA (585) ASN803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence lrhnpldiqmlsrglheqifgqggempgeaavrrsvehlqkhglwgqpavplpdvelrlpplygdnldqhfrllaqkqslpyleaanlllqaqlppkppawawaegwtrygpegeavpvaipeeralvfdvevclaegtcptlavaispsawyswcsqrlveeryswtsqlspadliplevptwqeqlvvghnvsfdrahireqyliqgsrmrfldtmsmhmaisglssfqrslwiaakaisswdwldissvnslaevhrlyvggpplekeprelfvkgtmkdirenfqdlmqycaqdvwathevfqqqlplflercphpvtlagmlemgvsylpvnqnwerylaeaqgtyeelqremkkslmdlandacqllsgerykedpwlwdlewdlqefkqkkpcseeeefqqdvmaraclqklkgttellpkrpqhlpghpgwyrklcprlddpawtpgpsllslqmrvtpklmaltwdgfplhyserhgwgylvpgrvvcpyraieslyrkhcleqyhhgngpyndvdipgcwffklphkdgnscnvgspfakdflpkmedgtlqagpggasgpraleinkmisfwrNahkrissqmvvwlprsalpravirhpdydeeglygailpqvvtagtitrraveptwltasnarpdrvgselkamvqappgytlvgadvdsqelwiaavlgdahfagmhgctafgwmtlqgrksrgtdlhsktattvgisrehakifnygriygagqpfaerllmqfnhrltqqeaaekaqqmyaatwkggtesemfnklesiatsdiprtpvlgccisralepsavqeefmtsrvnwvvqssavdylhlmlvamkwlfeefaidgrfcisihdevrylvreedryraalalqitnlltrcmfayklglndlpqsvaffsavdidrclrkevtmdcktpsnptgmerrygipqgealdiyqiieltkgslekrs >8d42_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HUMAN MITOCHONDRIAL DNA POLYMERASE GAMMA TERNARY COMPLEX WITH GT BASEPAIR IN EDITING CONFORMER (COMPOSITE) organism=? DNA sequence DA(P4):DT(T25) DA(P5):DT(T24) DA(P6):DT(T23) DC(P7):DG(T22) DG(P8):DC(T21) DA(P9):DT(T20) DC(P10):DG(T19) DG(P11):DC(T18) DG(P12):DC(T17) DC(P13):DG(T16) DC(P14):DG(T15) DA(P15):DT(T14) DG(P16):DC(T13) DT(P17):DA(T12) DG(P18):DC(T11) DC(P19):DG(T10) DC(P20):DG(T9) DA(P21):DT(T8) DT(P22):DA(T7) DA(P23):DT(T6) DT(P24):DG(T5) chainA (135) LEU203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (194) ASN270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 (197) PHE273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 (231) PHE307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 31 0 (233) ARG309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 (234) SER310 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 3 0 0 (237) ILE313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (277) VAL378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (431) ARG562 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (633) GLN843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (831) PHE1092 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (832) MET1093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (833) THR1094 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence lrhnpldiqmlsrglheqifgqggempgeaavrrsvehlqkhglwgqpavplpdvelrlpplygdnldqhfrllaqkqslpyleaanlllqaqlppkppawawaegwtrygpegeavpvaipeeralvfdvevcLaegtcptlavaispsawyswcsqrlveeryswtsqlspadliplevptdwqeqlvvghNvsFdrahireqyliqgsrmrfldtmsmhmaisglssFqRSlwIaakisswdwldissvnslaevhrlyvggpplekeprelfVkgtmkdirenfqdlmqycaqdvwathevfqqqlplflercphpvtlagmlemgvsylpvnqnwerylaeaqgtyeelqremkkslmdlandacqllsgerykedpwlwdlewdlqefkqkklgpcseeeefqqdvmaraclqklkgttellpkRpqhlpghpgwyrklcprlddpawtpgpsllslqmrvtpklmaltwdgfplhyserhgwgylvpgrrdnlvvcpyraieslyrkhcleqpsyhhgngpyndvdipgcwffklphkdgnscnvgspfakdflpkmedgtlqagpggasgpraleinkmisfwrnahkrissqmvvwlprsalpravirhpdydeeglygailpQvvtagtitrraveptwltasnarpdrvgselkamvqappgytlvgadvdsqelwiaavlgdahfagmhgctafgwmtlqgrksrgtdlhsktattvgisrehakifnygriygagqpfaerllmqfnhrltqqeaaekaqqmyaatkglrwyrlwkggtesemfnklesiatsdiprtpvlgccisralepsavqeeFMTsrvnwvvqssavdylhlmlvamkwlfeefaidgrfcisihdevrylvreedryraalalqitnlltrcmfayklglndlpqsvaffsavdidrclrkevtmdcktpsnptgmerrygipqgealdiyqiieltkgslekrs >8d4a_A: title=CAS12A2 QUATERNARY COMPLEX organism=? DNA sequence DT(D1):DA(G11) DT(D2):DA(G10) DT(D3):DA(G9) DT(D4):DA(G8) DT(D5):DA(G7) DT(D6):DA(G6) DT(D7):DA(G5) DT(D8):DA(G4) DT(D9):DA(G3) DT(D10):DA(G2) DT(D11):DA(G1) chainA (459) TYR465 0 0 0 0 0 0 0 30 0 0 0 (1040) LEU1065 0 0 0 0 0 0 2 0 0 0 0 (1042) ARG1067 0 0 0 0 0 14 0 0 0 0 0 (1043) ALA1068 0 0 0 0 0 0 1 0 0 0 0 (1044) TYR1069 0 0 0 0 0 86 35 0 0 0 0 (1048) LYS1073 0 0 0 0 0 0 0 1 0 0 0 (1055) TYR1080 0 0 0 0 0 0 0 44 0 0 0 (1060) SER1085 0 0 0 0 0 2 0 0 0 0 0 (1067) PHE1092 0 0 0 0 0 0 38 0 0 0 0 (1071) GLN1096 0 0 0 0 0 0 0 5 0 0 0 (1138) PRO1163 0 0 0 0 0 0 3 0 0 0 0 (1139) LYS1164 0 0 0 6 3 4 0 0 0 0 0 prot.sequence mlhaftnqyqlsktlrfgatlkedekkcksheelkgfvdisyenmkssatenelvkkcercyseivkfhnawekiyyrtdqiavykdfyrqlsrkarfdagkqnsqlitlaslcgmyqgaklsryitnywkdnitrqksflkdfsqqlhqytraleksdkahtkpnlinfnktfmvlanlvneiviplsngaisfpniskledgeeshliefalndysqlseligelkdaiatnggytpfakvtlnhytaeqkphvfkndidakirelkliglvetlkgksseqieeyfsnldkfstyndrnqsvivrtqcfkykpipflvkhqlakyisepngwdedavakvldavgairspahdyannqegfdlnhypikvafdyaweqlanslyttvtfpqemcekylnsiygcevskepvfkfyadllyirknlavlehknnlpsnqeefickinntfenivlpYkisqfetykkdilawindghdhkkytdakqqlgfirgglkgrinpytkltnefkqisstygktfaelrdkfkekneitkithfgiiiedknrdryllaselkheqinhvstilnkldkssefityqvksltsktlikliknhttkkgaispyadfhtsktgfnkneieknwdnykreqvlveyvkdcltdstmaknqnwaefgwnfekcnsyedieheidqksyllqsdtiskqsiaslveggclllpiinqditskerkdknqfskdwnhifegskefrlhpefavsyrtpiegypvqkrygrlqfvcafnahivpqngefinlkkqienfndedvqkrnvtefnkkvnhalsdkeyvvigidrglkqlatlcvldkrgkilgdfeiykkefvraekrseshwehtqaetrhildlsnlrvettiegkkvlvdqsltlvkknrdtpdeeateenkqkiklkqlsyirklqhkmqtneqdvldlinnepsdeefkkrieglissfgegqkyadlpintmremisdlqgviargnnqteknkiieldaadnlkqgivanmigivnyifakysykayisledLsRAYggaKsgydgrYlpstSqdedvdFkeqQnqmlaglgtyqffemqllkklqkiqsdntvlrfvpafrsadnyrnilrleetkykskpfgvvhfidPKftskkcpvcsktnvyrdkddilvckecgfrsdsqlkerennihyihngddngayhialksvenliqmk >8d86_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE CO- CRYSTALLIZED WITH A GUEST SMALL MOLECULE, NETROPSIN. organism=Escherichia coli K-12 DNA sequence DC(B4):DG(A32) DC(B5):DG(A31) DG(B6):DC(A30) DT(B7):DA(A29) DC(B8):DG(A28) DT(B9):DA(A27) DG(B10):DC(A26) DA(B11):DT(A25) DG(B12):DC(A24) DG(B13):DC(A23) DG(B14):DC(A22) DC(B15):DG(A21) DA(B16):DT(A20) DA(B17):DT(A19) DT(B18):DA(A18) DT(B19):DA(A17) DT(B20):DA(A16) DG(B21):DC(A15) DT(B22):DA(A14) DC(B23):DG(A13) DA(B24):DT(A12) DC(B25):DG(A11) DA(B26):DT(A10) DG(B27):DC(A9) DG(B28):DC(A8) DT(B29):DA(A7) DC(B30):DG(A6) DC(B31):DG(A5) DG(B32):DC(A4) chainC ( 56) SER75 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA76 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLU77 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) SER79 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) LYS80 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG83 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG124 0 0 0 0 2 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (165) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (167) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 9 3 0 0 0 0 0 0 (169) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 (170) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 (173) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 9 0 0 0 0 0 0 0 0 (174) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 11 3 0 0 0 0 0 0 0 0 0 0 (200) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 prot.sequence nsprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdits >8d8m_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE GROWN IN A CALCIUM CHLORIDE CRYSTALLIZATION SOLUTION. organism=Escherichia coli K-12 DNA sequence DC(B4):DG(A32) DC(B5):DG(A31) DG(B6):DC(A30) DT(B7):DA(A29) DC(B8):DG(A28) DT(B9):DA(A27) DG(B10):DC(A26) DA(B11):DT(A25) DG(B12):DC(A24) DG(B13):DC(A23) DG(B14):DC(A22) DC(B15):DG(A21) DA(B16):DT(A20) DA(B17):DT(A19) DT(B18):DA(A18) DT(B19):DA(A17) DT(B20):DA(A16) DG(B21):DC(A15) DT(B22):DA(A14) DC(B23):DG(A13) DA(B24):DT(A12) DC(B25):DG(A11) DA(B26):DT(A10) DG(B27):DC(A9) DG(B28):DC(A8) DT(B29):DA(A7) DC(B30):DG(A6) DC(B31):DG(A5) DG(B32):DC(A4) DG(B33):DC(A3) chainC ( 54) SER75 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ALA76 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLU77 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) SER79 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS80 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG83 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG124 0 0 0 0 2 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (163) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (165) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 8 3 0 0 0 0 0 0 0 (167) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 (168) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 1 0 0 0 0 0 0 0 0 0 (171) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 5 0 0 0 0 0 0 0 0 0 (172) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 14 4 0 0 0 0 0 0 0 0 0 0 0 (198) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 prot.sequence sprivqsndlteaayslsrdqkrmlylfvdqirksdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >8d96_B: title=HUMAN DNA POLYMERASE ALPHA/PRIMASE ELONGATION COMPLEX I BOUND TO PRIMER/TEMPLATE organism=? DNA sequence DA(F4) DT(F5) DG(F6) DG(F7) DT(F8) DC(F9) DG(F10) DT(F11) DG(F12) DC(F13) DC(F14) DG(F15) DC(F16) DC(F17) DA(F18) DA(F19) DT(F20) DA(F21) DA(F22) chainB ( 34) HIS303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 38) MET307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 ( 78) TYR347 0 0 0 0 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 ( 79) ASN348 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 ( 82) HIS351 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 0 0 0 0 ( 83) SER352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 91) THR360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 92) ASP361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 93) TYR362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 29 0 0 0 ( 94) THR363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 1 0 (174) HIS443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (176) ASN445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 prot.sequence kisldqidllstksfppcmrqlhkalrenhhlrHggrMqyglflkgigltleqalqfwkqefikgkmdpdkfdkgysYNirHSfgkegkrTDYTpfsclkiilsnppsqgdyhgcpfrhsdpellkqklqsykispggisqildlvkgthyqvacqkyfemihnvddcgfslnHpNqffcesqriln >8d96_BC:PriB_N-terminal_domain-like;Ribonuclease_H-like;DNA/RNA_polymerases;Zinc_finger_domain_of_DNA_polymerase-alpha; title=HUMAN DNA POLYMERASE ALPHA/PRIMASE ELONGATION COMPLEX I BOUND TO PRIMER/TEMPLATE organism=? DNA sequence DA(F4) DT(F5) DG(F6) DG(F7) DT(F8) DC(F9) DG(F10) DT(F11) DG(F12) DC(F13) DC(F14) DG(F15) DC(F16) DC(F17) DA(F18) DA(F19) DT(F20) DA(F21) DA(F22) chainB ( 34) HIS303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 38) MET307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 ( 78) TYR347 0 0 0 0 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 ( 79) ASN348 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 ( 82) HIS351 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 0 0 0 0 ( 83) SER352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 91) THR360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 ( 92) ASP361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 93) TYR362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 29 0 0 0 ( 94) THR363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 1 0 (174) HIS443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (176) ASN445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 chainC (569) LEU951 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (573) SER955 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (575) TYR957 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (580) PHE962 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (582) TYR964 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (671) LYS1053 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (699) ARG1081 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kisldqidllstksfppcmrqlhkalrenhhlrHggrMqyglflkgigltleqalqfwkqefikgkmdpdkfdkgysYNirHSfgkegkrTDYTpfsclkiilsnppsqgdyhgcpfrhsdpellkqklqsykispggisqildlvkgthyqvacqkyfemihnvddcgfslnHpNqffcesqriln/eqvfhfywldayedqynqpgvvflfgkvwiesaethvsccvmvkniertlyflpremkidlntgketgtpismkdvyeefdekiatkykimkfkskpveknyafeipdvpekseylevkysaempqlpqdlkgetfshvfgtntsslelflmnrkikgpcwlevkspqllnqpvswckveamalkpdlvnvikdvsppplvvmafsmktmqnaknhqneiiamaalvhhsfaldkaapkppfqshfcvvskpkdcifpyafkeviekknvkvevaatertllgfflakvhkidpdiivghniygfelevllqrinvckaphwskigrlkrsnmpklgfgernatcgrmicdveisakelircksyhlselvqqilktervvipmeniqnmysessqllyllehtwkdakfilqimcelnvlplalqitniagnimsrtlmggrserneflllhafyennyivpdkqiaayagglvldpkvgfydkfillldfnslypsiiqefnicfttvqrveqipelpdpslemgilpreirklverrkqvkqlmkqqdlnpdlilqydirqkalkLtanSmYgclgFsYsrfyakplaalvtykgreilmhtkemvqkmnleviygdtdsimintnstnleevfklgnkvksevnklyklleididgvfksllllkkKkyaalvveptsdgnyvtkqelkgldivRrdwcdlakdtgnfvigqilsdqsrdtiveniqkrlieigenvlngsvpvsqfeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtvsyvicqdgsnltasqrayapeqlqkqdnltidtqyylaqqihpvvaricepidgidavliatwlgldptqfrvhhy >8d9d_B:PriB_N-terminal_domain-like; title=HUMAN DNA POLYMERASE-ALPHA/PRIMASE ELONGATION COMPLEX II BOUND TO PRIMER/TEMPLATE organism=? DNA sequence DA(F4) DT(F5) DG(F6) DG(F7) DT(F8) DC(F9) DG(F10) DT(F11) DG(F12) DC(F13) DC(F14) DG(F15) DC(F16) DC(F17) DA(F18) DA(F19) DT(F20) DA(F21) DA(F22) chainB (269) HIS303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (273) MET307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 (313) TYR347 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (314) ASN348 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 (317) HIS351 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (326) THR360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (328) TYR362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 (329) THR363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5 0 (330) PRO364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (409) HIS443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 (411) ASN445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 prot.sequence yphclqfylqppsenisliefenlaidrvkllksvenlgvsyvkgteqyqskleselrklkfsyrenledeyeprrrdhishfilrlaycqseelrrwfiqqemdllrfrfsilpkdkiqdflkdsqlqfeaisdeektlreqeivasspslsglklgfesiykipfadaldlfrgrkvyledgfayvplkdivaiilnefraklskalaltarslpavqsderlqpllnhlshskisldqidllstksfppcmrqlhkalrenhhlrHggrMqyglflkgigltleqalqfwkqefikgkmdpdkfdkgysYNirHsfgkegkrTdYTPfsclkiilsnppsqgdyhgcpfrhsdpellkqklqsykispggisqildlvkgthyqvacqkyfemihnvddcgfslnHpNqffcesqriln >8d9d_BC:PriB_N-terminal_domain-like;Ribonuclease_H-like;DNA/RNA_polymerases;Zinc_finger_domain_of_DNA_polymerase-alpha; title=HUMAN DNA POLYMERASE-ALPHA/PRIMASE ELONGATION COMPLEX II BOUND TO PRIMER/TEMPLATE organism=? DNA sequence DA(F4) DT(F5) DG(F6) DG(F7) DT(F8) DC(F9) DG(F10) DT(F11) DG(F12) DC(F13) DC(F14) DG(F15) DC(F16) DC(F17) DA(F18) DA(F19) DT(F20) DA(F21) DA(F22) chainB (269) HIS303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 (273) MET307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 (313) TYR347 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 (314) ASN348 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 (317) HIS351 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (326) THR360 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (328) TYR362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 (329) THR363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5 0 (330) PRO364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (409) HIS443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 (411) ASN445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 chainC (573) SER955 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (575) TYR957 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (580) PHE962 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (582) TYR964 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (671) LYS1053 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (699) ARG1081 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence yphclqfylqppsenisliefenlaidrvkllksvenlgvsyvkgteqyqskleselrklkfsyrenledeyeprrrdhishfilrlaycqseelrrwfiqqemdllrfrfsilpkdkiqdflkdsqlqfeaisdeektlreqeivasspslsglklgfesiykipfadaldlfrgrkvyledgfayvplkdivaiilnefraklskalaltarslpavqsderlqpllnhlshskisldqidllstksfppcmrqlhkalrenhhlrHggrMqyglflkgigltleqalqfwkqefikgkmdpdkfdkgysYNirHsfgkegkrTdYTPfsclkiilsnppsqgdyhgcpfrhsdpellkqklqsykispggisqildlvkgthyqvacqkyfemihnvddcgfslnHpNqffcesqriln/eqvfhfywldayedqynqpgvvflfgkvwiesaethvsccvmvkniertlyflpremkidlntgketgtpismkdvyeefdekiatkykimkfkskpveknyafeipdvpekseylevkysaempqlpqdlkgetfshvfgtntsslelflmnrkikgpcwlevkspqllnqpvswckveamalkpdlvnvikdvsppplvvmafsmktmqnaknhqneiiamaalvhhsfaldkaapkppfqshfcvvskpkdcifpyafkeviekknvkvevaatertllgfflakvhkidpdiivghniygfelevllqrinvckaphwskigrlkrsnmpklgfgernatcgrmicdveisakelircksyhlselvqqilktervvipmeniqnmysessqllyllehtwkdakfilqimcelnvlplalqitniagnimsrtlmggrserneflllhafyennyivpdkqiaayagglvldpkvgfydkfillldfnslypsiiqefnicfttvqrveqipelpdpslemgilpreirklverrkqvkqlmkqqdlnpdlilqydirqkalkltanSmYgclgFsYsrfyakplaalvtykgreilmhtkemvqkmnleviygdtdsimintnstnleevfklgnkvksevnklyklleididgvfksllllkkKkyaalvveptsdgnyvtkqelkgldivRrdwcdlakdtgnfvigqilsdqsrdtiveniqkrlieigenvlngsvpvsqfeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtvsyvicqdgsnltasqrayapeqlqkqdnltidtqyylaqqihpvvaricepidgidavliatwlgldptqfrvhhytdeekyrdcerfkcpcptcgteniydnvfdgsgtdmepslyrcsnidckaspltftvqlsnklimdirrfikkyydgwliceeptcrnrtrhlplqfsrtgplcpacmkatlqpeysdkslytqlcfyryifdaecaleklttdhekdklkkqfftpkvlqdyrklkntaeqflsrsgysevnlsklfa >8dc2_A: title=CRYO-EM STRUCTURE OF CASLAMBDA (CAS12L) BOUND TO CRRNA AND DNA organism=? DNA sequence DT(D-9):DA(C9) DG(D-8):DC(C8) DA(D-7):DT(C7) DC(D-6):DG(C6) DC(D-5):DG(C5) DG(D-4):DC(C4) DT(D-3):DA(C3) DT(D-2):DA(C2) DT(D-1):DA(C1) DG(D0):DC(C0) chainA ( 2) LYS5 0 0 0 0 0 0 0 0 0 28 ( 95) ASN98 0 0 0 0 0 0 0 0 0 29 ( 99) ASN102 0 0 0 0 0 0 0 0 7 6 (123) THR126 0 0 0 0 0 0 8 2 0 0 (124) TYR127 0 0 0 0 0 1 1 0 0 0 (127) ARG130 0 0 0 0 0 0 0 7 4 0 (128) PHE131 0 0 0 0 0 0 0 4 3 7 (247) MET250 0 0 0 0 0 0 0 0 0 1 (250) SER253 0 0 0 0 0 0 1 9 2 0 (251) ASN254 0 0 0 0 7 3 1 0 0 0 prot.sequence hKktesnqiiktfsfkiknanglsldvlndaiteyqnyynicsdwikdhltmkiselykyipnekknsgyaltlisdewkdkpmymmfkkgypaNnrdNaiyetlntcntehytgnilnfsdTYyrRFgyvasaisnyvtkiskmstgsrsknisndsdvdtimeqviyemehngwtsvkdwenqmeylesktdsnpnfvyrmttlyefykshidevnskmetmsidslikfggcrrkdskksmyiMggSNtpfditqiggnslnikfsknlnvdvfgrydvikdntllvdiinghgasfvlkiindeiyidinvsvpfdkkiattnkvvgidvnikhmllatnilddgnvkgyvniykevindsdfkkvcnstvmqyftdfskfvtfcplefdflfsrvcnqkgiyndnsameksfsdvlnklkwnfietgdntkriyienvmklrsqmkayaivknayykqqseydfgkseefiqehpfsntdkgieilnkldniskkilgcrnniiqysynlfeingydmvslekltssqfkkklskfkddffnlmiksihfadikdyfitlsnngtagvslvpsyftsqmdsidhkiyfvnkhkvrssqekhinglnadynaarniayimentdcrnmfmkqsrtdkslynkpsyetfiktqgsavaklkkegfvkild >8dej_AIJK: title=D. VULGARIS TYPE I-C CASCADE BOUND TO DSDNA TARGET organism=? DNA sequence DC(M40) DG(M39) DC(M38) DT(M37) DT(M36) DG(M35) DC(M2) DT(M3) DG(M4) DG(M5) DA(M6) DG(M7) DG(M8) DA(M9) DG(M10) DT(M11) DT(M12) DT(M13) DT(M14) DC(M15) DG(M16) DC(M17) DC(M18) DA(M19) DT(M20) DG(M21) DC(M22) DT(M23) DC(M24) DA(M25) DG(M26) DA(M27) DC(M28) DT(M29) DG(M30) DG(M31) DC(M32) DG(M33):DG(M35) DA(M34) chainA chainI ( 51) GLU53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 53) LYS55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) ARG58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ASN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) ARG205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) GLN212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (268) PHE283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) PHE287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (322) PHE394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 46 0 0 0 0 0 0 0 0 (324) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 (326) GLN398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (390) TYR462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 (439) LYS511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (488) ARG560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 (492) ILE565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (493) HIS566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 (495) GLU568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (496) ILE569 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (499) GLN572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (531) LEU604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (532) PHE605 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 15 0 0 0 0 0 0 (534) LYS607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 chainJ ( 23) LYS23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 ( 26) GLU26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 27) ASP27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 ( 72) ARG72 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LYS73 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 ( 75) ILE77 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) HIS78 0 0 0 0 2 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 ( 78) GLU80 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ILE81 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) GLN84 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) ARG113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (115) PHE117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 2 0 chainK ( 72) ARG72 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LYS73 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) ARG113 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) PHE117 0 0 11 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tygirlrvwgdyacftrpemkvervsydvmppsaargileaihwkpairwivdrihvlrpivfdnvrrnevsskipkpnpatamrdrkplyflvddgsnrqqraatllrnvdyvieahfeltdkagaednagkhldifrrraragqsfqqpclgcrefpasfellegdvplscyagekrdlgymlldidferdmtplffkavmeddvitppsrtspevra/lqalhgyyqrmsadpdagmppygtsmenisfalvldakgtlrgiedlreqEgKKlRprkmlvpiaekkgNgikpnflwentsyilgvdakgkqertdkchaafiahikaadqdlaavlqflehgseevigsnivfriegepgfvherpaarqawanclnrreqglcgqclitgerqkpiaqlhpsikggRdgvrgaQavasivsfnntafesygkeqsinapvsqeaafsyvtalnyllnpsnrqkvtiadatvvfwaersspaediFagmFdppesvrfhvlglspnaarlsvrfwevdtvghmldkvgrhyreleiipQFnNeQefpslstllrqtavlnktenispvlagglframltggpypqsllpavlgriraeharpedksrYrlevvtyyraalikaylirnrklevpvsldpartdrpyllgrlfavleKaqedavpganatikdrylasasanpgqvfhmllknasnhtaklrkdpeRksaIHyEImmQeiidnisdfpvtmssdeqglfmigyyhqrkaLFtKk/vsldpartdrpyllgrlfavleKaqEDavpganatikdrylasasanpgqvfhmllknasnhtaklrkdpeRKaIHyEImmQeiidnisdfpvtmssdeqglfmigyyhqRkalFtk/vsldpartdrpyllgrlfavlekaqedavpganatikdrylasasanpgqvfhmllknasnhtaklrkdpeRKaihyeimmqeiidnisdfpvtmssdeqglfmigyyhqRkalFtk >8dej_J: title=D. VULGARIS TYPE I-C CASCADE BOUND TO DSDNA TARGET organism=? DNA sequence DC(M40) DG(M39) DC(M38) DT(M37) DT(M36) DG(M35) DC(M2) DT(M3) DG(M4) DG(M5) DA(M6) DG(M7) DG(M8) DA(M9) DG(M10) DT(M11) DT(M12) DT(M13) DT(M14) DC(M15) DG(M16) DC(M17) DC(M18) DA(M19) DT(M20) DG(M21) DC(M22) DT(M23) DC(M24) DA(M25) DG(M26) DA(M27) DC(M28) DT(M29) DG(M30) DG(M31) DC(M32) DG(M33):DG(M35) DA(M34) chainJ ( 23) LYS23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 ( 26) GLU26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 27) ASP27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 ( 72) ARG72 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LYS73 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 ( 75) ILE77 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) HIS78 0 0 0 0 2 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 ( 78) GLU80 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ILE81 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) GLN84 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (111) ARG113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (115) PHE117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 2 0 prot.sequence vsldpartdrpyllgrlfavleKaqEDavpganatikdrylasasanpgqvfhmllknasnhtaklrkdpeRKaIHyEImmQeiidnisdfpvtmssdeqglfmigyyhqRkalFtk >8df7_A:Topoisomerase_V_catalytic_domain-like;RuvA_domain_2-like; title=STRUCTURE OF M. KANDLERI TOPOISOMERASE V IN COMPLEX WITH DNA. 38 BASE PAIR SYMMETRIC DNA COMPLEX organism=Methanopyrus kandleri DNA sequence DG(V2):DC(U37) DC(V3):DG(U36) DC(V4):DG(U35) DT(V5):DA(U34) DG(V6):DC(U33) DC(V7):DG(U32) DA(V8):DT(U31) DC(V9):DG(U30) DG(V10):DC(U29) DA(V11):DT(U28) DA(V12):DT(U27) DT(V14):DA(U25) DA(V15):DT(U24) DA(V16):DT(U23) DG(V17):DC(U22) DC(V18):DG(U21) DA(V19):DT(U20) DT(V20):DA(U19) DG(V21):DC(U18) DC(V22):DG(U17) DT(V23):DA(U16) DT(V24):DA(U15) DA(V25):DT(U14) DT(V27):DA(U12) DT(V28):DA(U11) DC(V29):DG(U10) DG(V30):DC(U9) DT(V31):DA(U8) DG(V32):DC(U7) DC(V33):DG(U6) DA(V34):DT(U5) DG(V35):DC(U4) DG(V36):DC(U3) DA(V38):DC(V39) chainA (132) LYS134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (199) ASP201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (286) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 8 9 1 0 0 0 (287) TYR289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence lvydaefvgserefeeeretflkgvkaydgvlatrylmersssakndeellelhqnfilltgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldideedvpaievravKrnplqpalyrilvrygrvdlmpvtvdevppemageferlierydvpidekeerileilrenpwtphDeiarrlglsvsevegekdpessgiyslwsrvvvnieydertakrhvkrrdrlleelyehleelserylrhpltrrwivehkrdimrRYleqrivecalklqdrygiredvalclarafdgsismiattpyrtlkdvcpdltleeaksvnrtlatlidehglspdaadeliehfesiagilatdleeiermyeegrlseeayraaveiqlaeltkkegvgrktaerllrafgnpervkqlarefeieklasvegvgervlrslvpgyaslisirgidreraerllkkyggyskvreagveelredgltdaqirelkglktlesivgdlekadelkrkygsasavrrlpveelrelgfsddeiaeikgipkklreafdletaaelyerygslkeigrrlsyddllelgatpkaaaeikgpefkfllniegvgpklaerileavdydlerlaslnpeelaekveglgeelaervvyaarervesrrksgrqerseeewkewlerkvgegrarrlieyfgsagevgklvenaevskllevpgigdeavarlvpgyktlrdagltpaeaervlkrygsvskvqegatpdelrelglgdakiarilglrslvnarldvdtayelarrygsvsavraapvaelrelglsdraiariag >8df7_AB:Topoisomerase_V_catalytic_domain-like;RuvA_domain_2-like; title=STRUCTURE OF M. KANDLERI TOPOISOMERASE V IN COMPLEX WITH DNA. 38 BASE PAIR SYMMETRIC DNA COMPLEX organism=Methanopyrus kandleri DNA sequence DG(V2):DC(U37) DC(V3):DG(U36) DC(V4):DG(U35) DT(V5):DA(U34) DG(V6):DC(U33) DC(V7):DG(U32) DA(V8):DT(U31) DC(V9):DG(U30) DG(V10):DC(U29) DA(V11):DT(U28) DA(V12):DT(U27) DT(V14):DA(U25) DA(V15):DT(U24) DA(V16):DT(U23) DG(V17):DC(U22) DC(V18):DG(U21) DA(V19):DT(U20) DT(V20):DA(U19) DG(V21):DC(U18) DC(V22):DG(U17) DT(V23):DA(U16) DT(V24):DA(U15) DA(V25):DT(U14) DT(V27):DA(U12) DT(V28):DA(U11) DC(V29):DG(U10) DG(V30):DC(U9) DT(V31):DA(U8) DG(V32):DC(U7) DC(V33):DG(U6) DA(V34):DT(U5) DG(V35):DC(U4) DG(V36):DC(U3) DA(V38):DC(V39) chainA (132) LYS134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (199) ASP201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (286) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 8 9 1 0 0 0 (287) TYR289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 chainB (286) ARG288 0 0 9 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (751) LYS753 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (752) THR754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (755) ASP757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lvydaefvgserefeeeretflkgvkaydgvlatrylmersssakndeellelhqnfilltgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldideedvpaievravKrnplqpalyrilvrygrvdlmpvtvdevppemageferlierydvpidekeerileilrenpwtphDeiarrlglsvsevegekdpessgiyslwsrvvvnieydertakrhvkrrdrlleelyehleelserylrhpltrrwivehkrdimrRYleqrivecalklqdrygiredvalclarafdgsismiattpyrtlkdvcpdltleeaksvnrtlatlidehglspdaadeliehfesiagilatdleeiermyeegrlseeayraaveiqlaeltkkegvgrktaerllrafgnpervkqlarefeieklasvegvgervlrslvpgyaslisirgidreraerllkkyggyskvreagveelredgltdaqirelkglktlesivgdlekadelkrkygsasavrrlpveelrelgfsddeiaeikgipkklreafdletaaelyerygslkeigrrlsyddllelgatpkaaaeikgpefkfllniegvgpklaerileavdydlerlaslnpeelaekveglgeelaervvyaarervesrrksgrqerseeewkewlerkvgegrarrlieyfgsagevgklvenaevskllevpgigdeavarlvpgyktlrdagltpaeaervlkrygsvskvqegatpdelrelglgdakiarilglrslvnarldvdtayelarrygsvsavraapvaelrelglsdraiariag/lvydaefvgserefeeeretflkgvkaydgvlatrylmersssakndeellelhqnfilltgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldideedvpaievravkrnplqpalyrilvrygrvdlmpvtvdevppemageferlierydvpidekeerileilrenpwtphdeiarrlglsvsevegekdpessgiyslwsrvvvnieydertakrhvkrrdrlleelyehleelserylrhpltrrwivehkrdimrRyleqrivecalklqdrygiredvalclarafdgsismiattpyrtlkdvcpdltleeaksvnrtlatlidehglspdaadeliehfesiagilatdleeiermyeegrlseeayraaveiqlaeltkkegvgrktaerllrafgnpervkqlarefeieklasvegvgervlrslvpgyaslisirgidreraerllkkyggyskvreagveelredgltdaqirelkglktlesivgdlekadelkrkygsasavrrlpveelrelgfsddeiaeikgipkklreafdletaaelyerygslkeigrrlsyddllelgatpkaaaeikgpefkfllniegvgpklaerileavdydlerlaslnpeelaekveglgeelaervvyaarervesrrksgrqerseeewkewlerkvgegrarrlieyfgsagevgklvenaevskllevpgigdeavarlvpgyKTlrDagltpaeaervlkrygsvskvqegatpdelrelglgdakiarilglrslvnarldvdtayelarrygsvsavraapvaelrelglsdraiariag >8df8_A:Topoisomerase_V_catalytic_domain-like;RuvA_domain_2-like; title=STRUCTURE OF M. KANDLERI TOPOISOMERASE V IN COMPLEX WITH DNA. 40 BASE PAIR SYMMETRIC DNA COMPLEX organism=Methanopyrus kandleri DNA sequence DC(V4):DG(U37) DT(V5):DA(U36) DG(V6):DC(U35) DC(V7):DG(U34) DA(V8):DT(U33) DC(V9):DG(U32) DG(V10):DC(U31) DA(V11):DT(U30) DA(V12):DT(U29) DG(V13):DC(U28) DT(V14):DA(U27) DA(V15):DT(U26) DA(V16):DT(U25) DG(V17):DC(U24) DC(V18):DG(U23) DA(V19):DT(U22) DT(V20):DA(U21) DA(V21):DT(U20) DT(V22):DA(U19) DG(V23):DC(U18) DC(V24):DG(U17) DT(V25):DA(U16) DT(V26):DA(U15) DA(V27):DT(U14) DC(V28):DG(U13) DT(V29):DA(U12) DT(V30):DA(U11) DC(V31):DG(U10) DG(V32):DC(U9) DT(V33):DA(U8) DG(V34):DC(U7) DC(V35):DG(U6) DA(V36):DT(U5) DG(V37):DC(U4) DG(V38):DC(U3) chainA (286) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 13 5 4 0 0 (287) TYR289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (751) LYS753 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (752) THR754 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lvydaefvgserefeeeretflkgvkaydgvlatrylmersssakndeellelhqnfilltgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldideedvpaievravkrnplqpalyrilvrygrvdlmpvtvdevppemageferlierydvpidekeerileilrenpwtphdeiarrlglsvsevegekdpessgiyslwsrvvvnieydertakrhvkrrdrlleelyehleelserylrhpltrrwivehkrdimrRYleqrivecalklqdrygiredvalclarafdgsismiattpyrtlkdvcpdltleeaksvnrtlatlidehglspdaadeliehfesiagilatdleeiermyeegrlseeayraaveiqlaeltkkegvgrktaerllrafgnpervkqlarefeieklasvegvgervlrslvpgyaslisirgidreraerllkkyggyskvreagveelredgltdaqirelkglktlesivgdlekadelkrkygsasavrrlpveelrelgfsddeiaeikgipkklreafdletaaelyerygslkeigrrlsyddllelgatpkaaaeikgpefkfllniegvgpklaerileavdydlerlaslnpeelaekveglgeelaervvyaarervesrrksgrqerseeewkewlerkvgegrarrlieyfgsagevgklvenaevskllevpgigdeavarlvpgyKTlrdagltpaeaervlkrygsvskvqegatpdelrelglgdakiarilglrslvnarldvdtayelarrygsvsavraapvaelrelglsdraiariag >8df8_AB:Topoisomerase_V_catalytic_domain-like;RuvA_domain_2-like; title=STRUCTURE OF M. KANDLERI TOPOISOMERASE V IN COMPLEX WITH DNA. 40 BASE PAIR SYMMETRIC DNA COMPLEX organism=Methanopyrus kandleri DNA sequence DC(U3):DG(V38) DC(U4):DG(V37) DT(U5):DA(V36) DG(U6):DC(V35) DC(U7):DG(V34) DA(U8):DT(V33) DC(U9):DG(V32) DG(U10):DC(V31) DA(U11):DT(V30) DA(U12):DT(V29) DG(U13):DC(V28) DT(U14):DA(V27) DA(U15):DT(V26) DA(U16):DT(V25) DG(U17):DC(V24) DC(U18):DG(V23) DA(U19):DT(V22) DT(U20):DA(V21) DA(U21):DT(V20) DT(U22):DA(V19) DG(U23):DC(V18) DC(U24):DG(V17) DT(U25):DA(V16) DT(U26):DA(V15) DA(U27):DT(V14) DC(U28):DG(V13) DT(U29):DA(V12) DT(U30):DA(V11) DC(U31):DG(V10) DG(U32):DC(V9) DT(U33):DA(V8) DG(U34):DC(V7) DC(U35):DG(V6) DA(U36):DT(V5) DG(U37):DC(V4) chainA (286) ARG288 0 0 4 5 13 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) TYR289 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (751) LYS753 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (752) THR754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 chainB (286) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 1 5 0 (752) THR754 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (755) ASP757 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lvydaefvgserefeeeretflkgvkaydgvlatrylmersssakndeellelhqnfilltgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldideedvpaievravkrnplqpalyrilvrygrvdlmpvtvdevppemageferlierydvpidekeerileilrenpwtphdeiarrlglsvsevegekdpessgiyslwsrvvvnieydertakrhvkrrdrlleelyehleelserylrhpltrrwivehkrdimrRYleqrivecalklqdrygiredvalclarafdgsismiattpyrtlkdvcpdltleeaksvnrtlatlidehglspdaadeliehfesiagilatdleeiermyeegrlseeayraaveiqlaeltkkegvgrktaerllrafgnpervkqlarefeieklasvegvgervlrslvpgyaslisirgidreraerllkkyggyskvreagveelredgltdaqirelkglktlesivgdlekadelkrkygsasavrrlpveelrelgfsddeiaeikgipkklreafdletaaelyerygslkeigrrlsyddllelgatpkaaaeikgpefkfllniegvgpklaerileavdydlerlaslnpeelaekveglgeelaervvyaarervesrrksgrqerseeewkewlerkvgegrarrlieyfgsagevgklvenaevskllevpgigdeavarlvpgyKTlrdagltpaeaervlkrygsvskvqegatpdelrelglgdakiarilglrslvnarldvdtayelarrygsvsavraapvaelrelglsdraiariag/lvydaefvgserefeeeretflkgvkaydgvlatrylmersssakndeellelhqnfilltgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldideedvpaievravkrnplqpalyrilvrygrvdlmpvtvdevppemageferlierydvpidekeerileilrenpwtphdeiarrlglsvsevegekdpessgiyslwsrvvvnieydertakrhvkrrdrlleelyehleelserylrhpltrrwivehkrdimrRyleqrivecalklqdrygiredvalclarafdgsismiattpyrtlkdvcpdltleeaksvnrtlatlidehglspdaadeliehfesiagilatdleeiermyeegrlseeayraaveiqlaeltkkegvgrktaerllrafgnpervkqlarefeieklasvegvgervlrslvpgyaslisirgidreraerllkkyggyskvreagveelredgltdaqirelkglktlesivgdlekadelkrkygsasavrrlpveelrelgfsddeiaeikgipkklreafdletaaelyerygslkeigrrlsyddllelgatpkaaaeikgpefkfllniegvgpklaerileavdydlerlaslnpeelaekveglgeelaervvyaarervesrrksgrqerseeewkewlerkvgegrarrlieyfgsagevgklvenaevskllevpgigdeavarlvpgykTlrDagltpaeaervlkrygsvskvqegatpdelrelglgdakiarilglrslvnarldvdtayelarrygsvsavraapvaelrelglsdraiariag >8df9_A:Topoisomerase_V_catalytic_domain-like;RuvA_domain_2-like; title=STRUCTURE OF M. KANDLERI TOPOISOMERASE V IN COMPLEX WITH DNA. 38 BASE PAIR ASYMMETRIC DNA COMPLEX organism=Methanopyrus kandleri DNA sequence DG(V21):DC(U18) DC(V22):DG(U17) DT(V23):DA(U16) DT(V24):DA(U15) DA(V25):DT(U14) DC(V26):DG(U13) DT(V27):DA(U12) DT(V28):DA(U11) DC(V29):DG(U10) DG(V30):DC(U9) DT(V31):DA(U8) DG(V32):DC(U7) DC(V33):DG(U6) DA(V34):DT(U5) DG(V35):DC(U4) DG(V36):DC(U3) DC(V37):DG(U2) chainA (681) THR754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence alvydaefvgserefeeeretflkgvkaydgvlatrylmersssakndeellelhqnfilltgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldideedvpaievravkrnplqpalyrilvrygrvdlmpvtvdevppemageferlierydvpidekeerileilrenpwtphdeiarrlglsvsevegekdpessgiyslwsrvvvnieydertakrhvkrrdrlleelyehleelserylrhpltrrwivehkrdimrryleqrivecalklqdrygiredvalclarafdgsismiattpyrtlkdvcpdltleeaksvnrtlatlidehglspdaadeliehfesiagilatdleeiermyeegrlseeayraaveiqlaeltkkegvgrktaerllrafgnpervkqlarefeieklasvegvgervlrslvpgyaslisirgidreraerllkkyggyskvreagveelredgltdaqirelkglktlesivgdlekadelkrkygsasavrrlpveelrelgfsddeiaeikgipkklreafdletaaelyerygslkeigrrlsyddllelgatpkaaaeikerseeewkewlerkvgegrarrlieyfgsagevgklvenaevskllevpgigdeavarlvpgykTlrdagltpaeaervlkrygsvskvqegatpdelrelglgdakiarilglrslvnarldvdtayelarrygsvsavraapvaelrelglsdraiariagip >8dfa_ABCDEIJ: title=TYPE I-C CASCADE BOUND TO SSDNA TARGET organism=? DNA sequence DT(N16) DC(N17) DG(N18) DC(N19) DC(N20) DA(N21) DG(N22) DC(N23) DC(N24) DT(N25) DG(N26) DA(N27) DG(N28) DC(N29) DA(N30) DT(N31) DG(N32) DG(N33) chainA chainB (140) ARG156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (153) ARG173 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (154) THR174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (155) MET175 0 0 0 0 0 0 0 0 0 0 0 0 14 6 0 0 0 0 chainC (122) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (124) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (131) GLN131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (156) ARG156 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (160) THR160 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (169) ARG173 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 (170) THR174 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (171) MET175 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 (173) ARG177 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 chainD (131) GLN131 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (156) ARG156 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ASN172 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) THR174 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) MET175 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE (124) THR124 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (222) LEU413 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (326) VAL517 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (362) LYS553 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainJ ( 32) ALA32 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ASN33 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tygirlrvwgdyacftrpemkvervsydvmppsaargileaihwkpairwivdrihvlrpivfdnvrrnevsskipkpnpatamrdrkplyflvddgsnrqqraatllrnvdyvieahfeltdkagaednagkhldifrrraragqsfqqpclgcrefpasfellegdvplscyagekrdlgymlldidferdmtplffkavmedgvitppsrtspevra/mtaianryefvllfdvengnpngdpdagnmpridpetghglvtdvclkrkirnhvaltkegaerfniyiqekailnetheraytdakrvtdwmctnfydirtfgavmttevncgqvrgpvqmafarsvepvvpqevsitRmavttkaeaednRTMgrkhivpyglyvahgfisaplaektgfsdedltlfwdalvnmfehdrsaarglmssrklivfkhqnrlgnapahklfdlvkvsraegssgparsfadyavtvgqapegvevkeml/mtaianryefvllfdvengnpngdpdagnmpridpetghglvtdvclkrkirnhvaltkegaerfniyiqekailnetheraytacdlkpepkklpkkvedakrvtdwmctnfydirtfgaVmTtevncgQvrgpvqmafarsvepvvpqevsitRmavTtkaeaednRTMgRkhivpyglyvahgfisaplaektgfsdedltlfwdalvnmfehdrsaarglmssrklivfkhqnrlgnapahklfdlvkvsraegssgparsfadyavtvgqapegvevkeml/mtaianryefvllfdvengnpngdpdagnmpridpetghglvtdvclkrkirnhvaltkegaerfniyiqekailnetheraytacdlkpepkklpkkvedakrvtdwmctnfydirtfgavmttevncgQvrgpvqmafarsvepvvpqevsitRmavttkaeaedNrTMgrkhivpyglyvahgfisaplaektgfsdedltlfwdalvnmfehdrsaarglmssrklivfkhqnrlgnapahklfdlvkvsraegssgparsfadyavtvgqapegvevkeml/mtaianryefvllfdvengnpngdpdagnmpridpetghglvtdvclkrkirnhvaltkegaerfniyiqekailnetheraytacdlkpepkklpkkvedakrvtdwmctnfydirtfgavmTtevncgqvrgpvqmafarsvepvvpqevsitrmavttkaeaednrtmgrkhivpyglyvahgfisaplaektgfsdedltlfwdalvnmfehdrsaarglmssrklivfkhqnrlgnapahklfdlvkvsraegssgparsfadyavtvgqapegvevkeml/lqalhgyyqrmsadpdagmppylcgqclitgerqkpiaqlhpsikggrdgvrgaqavasivsfnntafesygkeqsinapvsqeaafsyvtalnyllnpsnrqkvtiadatvvfwaersspaedifagmfdpprmhdllvairsgkratdimpdmdesvrfhvlglspnaarlsvrfwevdtvghmldkvgrhyreleiipqfnneqefpslstllrqtavLnktenispvlagglframltggpypqsllpavlgriraeharpedksryrlevvtyyraalikaylirnrklevpvsldpartdrpyllgrlfavlekaqedaVpganatikdrylasasanpgqvfhmllknasnhtaKlrkdperkaihyeimmqeiidnisdfpvtmssdeqglfmigyyhqrkalftkk/vsldpartdrpyllgrlfavlekaqedavpgANatikdrylasasanpgqvfhmllknasnhtaklrkdperkaihyeimmqeiidnisdfpvtmssdeqglfmigyyhqrkalftk >8dfa_C: title=TYPE I-C CASCADE BOUND TO SSDNA TARGET organism=? DNA sequence DT(N16) DC(N17) DG(N18) DC(N19) DC(N20) DA(N21) DG(N22) DC(N23) DC(N24) DT(N25) DG(N26) DA(N27) DG(N28) DC(N29) DA(N30) DT(N31) DG(N32) DG(N33) chainC (122) VAL122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (124) THR124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (131) GLN131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (156) ARG156 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (160) THR160 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (169) ARG173 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 (170) THR174 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (171) MET175 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 (173) ARG177 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence mtaianryefvllfdvengnpngdpdagnmpridpetghglvtdvclkrkirnhvaltkegaerfniyiqekailnetheraytacdlkpepkklpkkvedakrvtdwmctnfydirtfgaVmTtevncgQvrgpvqmafarsvepvvpqevsitRmavTtkaeaednRTMgRkhivpyglyvahgfisaplaektgfsdedltlfwdalvnmfehdrsaarglmssrklivfkhqnrlgnapahklfdlvkvsraegssgparsfadyavtvgqapegvevkeml >8dfb_AB:Topoisomerase_V_catalytic_domain-like;RuvA_domain_2-like; title=STRUCTURE OF M. KANDLERI TOPOISOMERASE V IN COMPLEX WITH DNA. 39 BASE PAIR SYMMETRIC DNA COMPLEX organism=Methanopyrus kandleri DNA sequence DC(V3):DG(U37) DC(V4):DG(U36) DT(V5):DA(U35) DG(V6):DC(U34) DC(V7):DG(U33) DA(V8):DT(U32) DC(V9):DG(U31) DG(V10):DC(U30) DA(V11):DT(U29) DA(V12):DT(U28) DT(V14):DA(U26) DA(V15):DT(U25) DA(V16):DT(U24) DG(V17):DC(U23) DC(V18):DG(U22) DA(V19):DT(U21) DA(V20):DT(U20) DT(V21):DA(U19) DG(V22):DC(U18) DC(V23):DG(U17) DT(V24):DA(U16) DT(V25):DA(U15) DA(V26):DT(U14) DT(V28):DA(U12) DT(V29):DA(U11) DC(V30):DG(U10) DG(V31):DC(U9) DT(V32):DA(U8) DG(V33):DC(U7) DC(V34):DG(U6) DA(V35):DT(U5) DG(V36):DC(U4) DG(V37):DC(U3) DA(V39):DC(V40) chainA (132) LYS134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (133) ARG135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (197) PRO199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (199) ASP201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (286) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 10 11 0 0 0 (287) TYR289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (752) THR754 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (755) ASP757 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (285) ARG287 0 0 0 0 0 1 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG288 0 0 6 7 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) TYR289 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (752) THR754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (755) ASP757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lvydaefvgserefeeeretflkgvkaydgvlatrylmersssakndeellelhqnfilltgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldideedvpaievravKRnplqpalyrilvrygrvdlmpvtvdevppemageferlierydvpidekeerileilrenpwtPhDeiarrlglsvsevegekdpessgiyslwsrvvvnieydertakrhvkrrdrlleelyehleelserylrhpltrrwivehkrdimrRYleqrivecalklqdrygiredvalclarafdgsismiattpyrtlkdvcpdltleeaksvnrtlatlidehglspdaadeliehfesiagilatdleeiermyeegrlseeayraaveiqlaeltkkegvgrktaerllrafgnpervkqlarefeieklasvegvgervlrslvpgyaslisirgidreraerllkkyggyskvreagveelredgltdaqirelkglktlesivgdlekadelkrkygsasavrrlpveelrelgfsddeiaeikgipkklreafdletaaelyerygslkeigrrlsyddllelgatpkaaaeikgpefkfllniegvgpklaerileavdydlerlaslnpeelaekveglgeelaervvyaarervesrrksgrqerseeewkewlerkvgegrarrlieyfgsagevgklvenaevskllevpgigdeavarlvpgykTlrDagltpaeaervlkrygsvskvqegatpdelrelglgdakiarilglrslvnarldvdtayelarrygsvsavraapvaelrelglsdraiariag/lvydaefvgserefeeeretflkgvkaydgvlatrylmersssakndeellelhqnfilltgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldideedvpaievravkrnplqpalyrilvrygrvdlmpvtvdevppemageferlierydvpidekeerileilrenpwtphdeiarrlglsvsevegekdpessgiyslwsrvvvnieydertakrhvkrrdrlleelyehleelserylrhpltrrwivehkrdimRRYleqrivecalklqdrygiredvalclarafdgsismiattpyrtlkdvcpdltleeaksvnrtlatlidehglspdaadeliehfesiagilatdleeiermyeegrlseeayraaveiqlaeltkkegvgrktaerllrafgnpervkqlarefeieklasvegvgervlrslvpgyaslisirgidreraerllkkyggyskvreagveelredgltdaqirelkglktlesivgdlekadelkrkygsasavrrlpveelrelgfsddeiaeikgipkklreafdletaaelyerygslkeigrrlsyddllelgatpkaaaeikgpefkfllniegvgpklaerileavdydlerlaslnpeelaekveglgeelaervvyaarervesrrksgrqerseeewkewlerkvgegrarrlieyfgsagevgklvenaevskllevpgigdeavarlvpgykTlrDagltpaeaervlkrygsvskvqegatpdelrelglgdakiarilglrslvnarldvdtayelarrygsvsavraapvaelrelglsdraiariag >8dfb_B:Topoisomerase_V_catalytic_domain-like;RuvA_domain_2-like; title=STRUCTURE OF M. KANDLERI TOPOISOMERASE V IN COMPLEX WITH DNA. 39 BASE PAIR SYMMETRIC DNA COMPLEX organism=Methanopyrus kandleri DNA sequence DC(V3):DG(U37) DC(V4):DG(U36) DT(V5):DA(U35) DG(V6):DC(U34) DC(V7):DG(U33) DA(V8):DT(U32) DC(V9):DG(U31) DG(V10):DC(U30) DA(V11):DT(U29) DA(V12):DT(U28) DT(V14):DA(U26) DA(V15):DT(U25) DA(V16):DT(U24) DG(V17):DC(U23) DC(V18):DG(U22) DA(V19):DT(U21) DA(V20):DT(U20) DT(V21):DA(U19) DG(V22):DC(U18) DC(V23):DG(U17) DT(V24):DA(U16) DT(V25):DA(U15) DA(V26):DT(U14) DT(V28):DA(U12) DT(V29):DA(U11) DC(V30):DG(U10) DG(V31):DC(U9) DT(V32):DA(U8) DG(V33):DC(U7) DC(V34):DG(U6) DA(V35):DT(U5) DG(V36):DC(U4) DG(V37):DC(U3) DA(V39):DC(V40) chainB (285) ARG287 0 0 0 0 0 1 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG288 0 0 6 7 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) TYR289 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (752) THR754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (755) ASP757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lvydaefvgserefeeeretflkgvkaydgvlatrylmersssakndeellelhqnfilltgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldideedvpaievravkrnplqpalyrilvrygrvdlmpvtvdevppemageferlierydvpidekeerileilrenpwtphdeiarrlglsvsevegekdpessgiyslwsrvvvnieydertakrhvkrrdrlleelyehleelserylrhpltrrwivehkrdimRRYleqrivecalklqdrygiredvalclarafdgsismiattpyrtlkdvcpdltleeaksvnrtlatlidehglspdaadeliehfesiagilatdleeiermyeegrlseeayraaveiqlaeltkkegvgrktaerllrafgnpervkqlarefeieklasvegvgervlrslvpgyaslisirgidreraerllkkyggyskvreagveelredgltdaqirelkglktlesivgdlekadelkrkygsasavrrlpveelrelgfsddeiaeikgipkklreafdletaaelyerygslkeigrrlsyddllelgatpkaaaeikgpefkfllniegvgpklaerileavdydlerlaslnpeelaekveglgeelaervvyaarervesrrksgrqerseeewkewlerkvgegrarrlieyfgsagevgklvenaevskllevpgigdeavarlvpgykTlrDagltpaeaervlkrygsvskvqegatpdelrelglgdakiarilglrslvnarldvdtayelarrygsvsavraapvaelrelglsdraiariag >8dh0_B:DNA/RNA_polymerases; title=T7 RNA POLYMERASE ELONGATION COMPLEX WITH UNNATURAL BASE DDS organism=? DNA sequence DT(A6) DC(A7) DG(A8) DA(A9) DA(A11) DT(A12) DC(A13) DG(A14) DC(A15) DC(A16) DG(A17) DC(A18) chainB (404) TYR427 0 0 0 0 0 1 0 0 0 0 0 0 (608) TYR639 0 0 0 0 47 0 0 0 0 0 0 0 (613) PHE644 0 0 0 37 0 0 0 0 0 0 0 0 (741) HIS784 0 0 0 0 6 0 0 0 0 0 0 0 prot.sequence mntiniakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmferqlkagevadnaaakplittllpkmiarindwfeevkakrgkrptafqflqeikpeavayitikttlacltsnttvqavasaigraiedearfgrirdakhfkknveeqlnkrvghvykkafmqvveadmlskgllggeawsswhkedsihvgvrciemliestgmvslhrqnagvvgqdsetielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaitawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvYavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvtvtekvklgtkalagqwlaygvtrsvtkrsvmtlaYgskeFgfrqqvledtiqpaidsgkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtrlnlmflgqseidahkqesgiapnfvHsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa >8dh1_L:DNA/RNA_polymerases; title=T7 RNA POLYMERASE ELONGATION COMPLEX WITH UNNATURAL BASE DDS-PATP PAIR organism=? DNA sequence DA(M5):DT(O6) DT(M6):DA(O5) DC(M7):DG(O4) DG(M8):DC(O3) DA(M9):DT(O2) chainL (489) PHE644 0 0 0 0 24 prot.sequence iniakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmferqlkagevadnaaakplittllpkmiarikpeavayitikttlacltsnttvqavasaigraiedearkedsihvgvrciemliestgetielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipltawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdrsvtkrsvmtlaygskeFgfrqqvledtiqpaidsgkglmftgymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtrdseidahkqesgiapnfvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfaf >8dh2_E:DNA/RNA_polymerases; title=T7 RNA POLYMERASE ELONGATION COMPLEX WITH UNNATURAL BASE DDS-ATP MISMATCH organism=? DNA sequence DG(F2):DC(H9) DG(F3):DC(H8) DA(F4):DT(H7) DA(F5):DT(H6) DT(F6):DA(H5) DC(F7):DG(H4) DG(F8):DC(H3) DA(F9):DT(H2) chainE (611) PHE644 0 0 0 0 0 0 0 47 (614) ARG647 0 0 0 0 0 0 0 2 (680) LYS713 5 0 0 0 0 0 0 0 prot.sequence iniakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmferqlkagevadnaaakplittllpkmiarindwfeevkakrgkrptafqflqeikpeavayitikttlacltttvqavasaigraiedearfgrirdleakhfkknveeqlnkrvghvykkafmqvveadmlskgllggeawsswhkedsihvgvrciemliestgmvslhrqnasetielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvtvtdentgeisekvklgtkalagqwlaygvtrsvtkrsvmtlaygskeFgfRqqvledtiqpaidsgkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdKktgeilrkrcavhwvtpdgfpvwqeykkpiqtrlnlmflgqfrdseidahkqesgiapnfvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa >8dh3_M:DNA/RNA_polymerases; title=T7 RNA POLYMERASE ELONGATION COMPLEX WITH UNNATURAL BASE DPA organism=? DNA sequence DG(N2):DC(P9) DA(N4):DC(P8) DA(N5):DT(P6) DT(N6):DA(P5) DC(N7):DG(P4) DG(N8):DC(P3) DA(N9):DT(P2) chainM (555) PHE644 0 0 0 0 0 0 57 prot.sequence ntiniakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmferqlkagevadnaaakplittllpkmiarindwfeevkakrayitikttlacltsadnttvqavasaigraiedearfgrirdleakhfkknveeqlnkrvghvykkafmswhkedsihvgvrciemliesetielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipealtawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevklgtkalagqwlaygvtrsvtkrsvmtlaygskeFgfrqqvledtiqpaidsgkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeykkpiqtrldseidahkqesgiapnfvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfaf >8dh5_M:DNA/RNA_polymerases; title=T7 RNA POLYMERASE ELONGATION COMPLEX WITH UNNATURAL BASE DPA-ATP MISMATCH organism=? DNA sequence DT(P2):DA(N9) DC(P3):DG(N8) DG(P4):DC(N7) DA(P5):DT(N6) DT(P6):DA(N5) DT(P7):DA(N4) DC(P8):DG(N3) DC(P9):DG(N2) chainM (513) GLU643 1 0 0 0 0 0 0 0 (514) PHE644 54 0 0 0 0 0 0 0 (583) LYS713 0 0 0 0 0 0 0 14 prot.sequence mntiniakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmferqlkagevadnaaakplittllpkmiarindwkpeavayitikttlacltnttvqavasaigraiedearfhkedsihvgvrciemliestielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiealtawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnlgtkalagqwlaygvtrsvtkrsvmtlaygskEFgfrqqvledtiqpaidsgkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdKktgeilrkrcavhwvtpdgfpvwqeykkpiqtrlnlmflgdseidahkqesgiapnfvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldkmpalpakgnlnlrdilesdfaf >8dk2_CD: title=CRYOEM STRUCTURE OF PSEUDOMONAS AERUGINOSA PA14 JETABC IN AN UNCLAMPED STATE TRAPPED IN ATP DEPENDENT DIMERIC FORM organism=? DNA sequence DT(P3):DA(Q31) DT(P4):DA(Q30) DT(P5):DA(Q29) DT(P6):DA(Q28) DT(P7):DA(Q27) DT(P8):DA(Q26) DT(P9):DA(Q25) DT(P10):DA(Q24) DT(P11):DA(Q23) DT(P12):DA(Q22) DT(P13):DA(Q21) DT(P14):DA(Q20) DT(P15):DA(Q19) DT(P16):DA(Q18) DT(P17):DA(Q17) DT(P18):DA(Q16) DT(P19):DA(Q15) DT(P20):DA(Q14) DT(P21):DA(Q13) DT(P22):DA(Q12) DT(P23):DA(Q11) DT(P24):DA(Q10) DT(P25):DA(Q9) DT(P26):DA(Q8) DT(P27):DA(Q7) DT(P28):DA(Q6) chainC (581) ARG946 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 chainD prot.sequence setfiltsielynwggfqgyhraeidpsgtavigptgsgkttlvdalmtllcanprynlastgghesdrdlvsyvrgvtgpgdggveqshiarqgktvtaiaatlerdgaqvrlgavlwfegtsssasdlkklwllsespeqtlehwlsqhhaggmralrqmekdgmgiwpypskkaflarlrdyfevgenaftllnraaglkqlnsideifrelvlddrsaferaaevassfddltdihreletarkqqrslqpvadgweryralqeqlqdkqalegilpvwfaeqgyrlwlaetnrlekehkqaeldqaqcrsqleiqkgvvdqhrqrylrnlavikaeldqaealresldqqlqrlieqcvqlktqfdqaasatrkayrgaekglsdtqrelaqahfpilstddlgdidelerkhtrelqgqlktlgeklgdqktelakrmsdalkadtgalaevgrelvdvprylerlrvlteealpeklkrfleylnrssddgvtqllsyidhevsmieerlddlnstmqrvdfqpgrylrlvakkviheslrtlqhaqrqlnsarhykalqalvgllkdacehsRnqgakalldprfrlefavsvidregnnlietrtgsqggsggekeiiasyvltaslsyalcpdgssrplfgtivldqafsrsshavagriiaalrefglhavfitpnkemrllrhhtrsavvvhrrgvesslvslswealdeh/setfiltsielynwggfqgyhraeidpsgtavigptgsgkttlvdalmtllcanprynlastgghesdrdlvsyvrgvtgpgdggveqshiarqgktvtaiaatlerdgaqvrlgavlwfegtsssasdlkklwllsespeqtlehwlsqhhaggmralrqmekdgmgiwpypskkaflarlrdyfevgenaftllnraaglkqlnsideifrelvlddrsaferaaevassfddltdihreletarkqqrslqpvadgweryralqeqlqdkqalegilpvwfaeqgyrlwlaetnrlekehkqaeldqaqcrsqleiqkgvvdqhrqrylrnlavikaeldqaealresldqqlqrlieqcvqlktqfdqaasatrkayrgaekglsdtqrelaqahfpilstddlgdidelerkhtrelqgqlktlgeklgdqktelakrmsdalkadtgalaevgrelvdvprylerlrvlteealpeklkrfleylnrssddgvtqllsyidhevsmieerlddlnstmqrvdfqpgrylrlvakkviheslrtlqhaqrqlnsarhykalqalvgllkdacehsRnqgakalldprfrlefavsvidregnnlietrtgsqggsggekeiiasyvltaslsyalcpdgssrplfgtivldqafsrsshavagriiaalrefglhavfitpnkemrllrhhtrsavvvhrrgvesslvslswe >8dk3_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYOEM STRUCTURE OF PSEUDOMONAS AERUGINOSA PA14 JETC ATPASE DOMAIN BOUND TO DNA AND CWHD DOMAIN OF JETA organism=? DNA sequence DT(P3):DA(Q31) DT(P4):DA(Q30) DT(P5):DA(Q29) DT(P6):DA(Q28) DT(P7):DA(Q27) DT(P8):DA(Q26) DT(P9):DA(Q25) DT(P10):DA(Q24) DT(P11):DA(Q23) DT(P12):DA(Q22) DT(P13):DA(Q21) DT(P14):DA(Q20) DT(P15):DA(Q19) DT(P16):DA(Q18) DT(P17):DA(Q17) DT(P18):DA(Q16) DT(P19):DA(Q15) DT(P20):DA(Q14) DT(P21):DA(Q13) DT(P22):DA(Q12) DT(P23):DA(Q11) DT(P24):DA(Q10) DT(P25):DA(Q9) DT(P26):DA(Q8) DT(P27):DA(Q7) DT(P28):DA(Q6) chainA (313) ARG946 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 prot.sequence setfiltsielynwggfqgyhraeidpsgtavigptgsgkttlvdalmtllcanprynlastgghesdrdlvsyvrgvtgpgdggveqshiarqgktvtaiaatlerdgaqvrlgavlwfegtsssasdlkklwllsespeqtlehwlsqhhaggmralrqmekdgmgiwpypskkaflarlrdyfevgenaftllnraaglkqlnsideifrelvlddrsaferaaevassfvtqllsyidhevsmieerlddlnstmqrvdfqpgrylrlvakkviheslrtlqhaqrqlnsakalqalvgllkdacehsRnqgakalldprfrlefavsvidregnnlietrtgsqggsggekeiiasyvltaslsyalcpdgssrplfgtivldqafsrsshavagriiaalrefglhavfitpnkemrllrhhtrsavvvhrrgvesslvslswealdeh >8dk3_AB:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYOEM STRUCTURE OF PSEUDOMONAS AERUGINOSA PA14 JETC ATPASE DOMAIN BOUND TO DNA AND CWHD DOMAIN OF JETA organism=? DNA sequence DA(Q6):DT(P28) DA(Q7):DT(P27) DA(Q8):DT(P26) DA(Q9):DT(P25) DA(Q10):DT(P24) DA(Q11):DT(P23) DA(Q12):DT(P22) DA(Q13):DT(P21) DA(Q14):DT(P20) DA(Q15):DT(P19) DA(Q16):DT(P18) DA(Q17):DT(P17) DA(Q18):DT(P16) DA(Q19):DT(P15) DA(Q20):DT(P14) DA(Q21):DT(P13) DA(Q22):DT(P12) DA(Q23):DT(P11) DA(Q24):DT(P10) DA(Q25):DT(P9) DA(Q26):DT(P8) DA(Q27):DT(P7) DA(Q28):DT(P6) DA(Q29):DT(P5) DA(Q30):DT(P4) DA(Q31):DT(P3) chainA (313) ARG946 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence setfiltsielynwggfqgyhraeidpsgtavigptgsgkttlvdalmtllcanprynlastgghesdrdlvsyvrgvtgpgdggveqshiarqgktvtaiaatlerdgaqvrlgavlwfegtsssasdlkklwllsespeqtlehwlsqhhaggmralrqmekdgmgiwpypskkaflarlrdyfevgenaftllnraaglkqlnsideifrelvlddrsaferaaevassfvtqllsyidhevsmieerlddlnstmqrvdfqpgrylrlvakkviheslrtlqhaqrqlnsakalqalvgllkdacehsRnqgakalldprfrlefavsvidregnnlietrtgsqggsggekeiiasyvltaslsyalcpdgssrplfgtivldqafsrsshavagriiaalrefglhavfitpnkemrllrhhtrsavvvhrrgvesslvslswealdeh/setfiltsielynwggfqgyhraeidpsgtavigptgsgkttlvdalmtllcanprynlastgghesdrdlvsyvrgvtgpgdggveqshiarqgktvtaiaatlerdgaqvrlgavlwfegtsssasdlkklwllsespeqtlehwlsqhhaggmralrqmekdgmgiwpypskkaflarlrdyfevgenaftllnraaglkqlnsideifrelvlddrsaferaaevassftqllsyidhevsmieerlddlnstmqrvdfqpgrylrlvakkviheslrtlqhaqrqlnsarkalqalvgllkdacehsRnqgakalldprfrlefavsvidregnnlietrtgsqggsggekeiiasyvltaslsyalcpdgssrplfgtivldqafsrsshavagriiaalrefglhavfitpnkemrllrhhtrsavvvhrrgvesslvslswe >8dk5_A:Histone-fold; title=STRUCTURE OF 187BP LIN28B NUCLEOSOME WITH SITE 0 MUTATION organism=? DNA sequence DA(I12):DT(J152) DG(I13):DC(J150) DA(I14):DT(J149) DA(I15):DT(J148) DT(I16):DA(J147) DC(I17):DG(J146) DC(I18):DG(J145) DT(I19):DA(J144) DC(I20):DG(J143) DA(I21):DT(J142) DG(I22):DC(J141) DT(I23):DA(J140) DG(I24):DC(J139) DG(I25):DC(J138) DT(I26):DA(J137) DG(I27):DC(J136) DA(I28):DT(J135) DG(I29):DC(J134) DT(I30):DA(J133) DA(I31):DT(J132) DT(I32):DA(J131) DT(I33):DA(J130) DA(I34):DT(J129) DA(I35):DT(J128) DC(I36):DG(J127) DA(I37):DT(J126) DT(I38):DA(J125) DG(I39):DC(J124) DG(I40):DC(J123) DA(I41):DT(J122) DA(I42):DT(J121) DC(I43):DG(J120) DT(I44):DA(J119) DT(I45):DA(J118) DA(I46):DT(J117) DC(I47):DG(J116) DT(I48):DA(J115) DC(I49):DG(J114) DC(I50):DG(J113) DA(I51):DT(J112) DA(I52):DT(J111) DC(I53):DG(J110) DA(I54):DT(J109) DA(I55):DT(J108) DT(I56):DA(J107) DA(I57):DT(J106) DC(I58):DG(J105) DA(I59):DT(J104) DG(I60):DC(J103) DA(I61):DT(J102) DT(I62):DA(J101) DG(I63):DC(J100) DC(I64):DG(J99) DT(I65):DA(J98) DG(I66):DC(J97) DA(I67):DT(J96) DA(I68):DT(J95) DT(I69):DA(J94) DA(I70):DT(J93) DA(I71):DT(J92) DA(I72):DT(J91) DT(I73):DA(J90) DG(I74):DC(J89) DT(I75):DA(J88) DA(I76):DT(J87) DG(I77):DC(J86) DT(I78):DA(J85) DC(I79):DG(J84) DT(I80):DA(J83) DA(I81):DT(J82) DA(I82):DT(J81) DG(I83):DC(J80) DT(I84):DA(J79) DG(I85):DC(J78) DA(I86):DT(J77) DA(I87):DT(J76) DG(I88):DC(J75) DG(I89):DC(J74) DA(I90):DT(J73) DA(I91):DT(J72) DG(I92):DC(J71) DA(I93):DT(J70) DA(I94):DT(J69) DG(I95):DC(J68) DG(I96):DC(J67) DA(I97):DT(J66) DA(I98):DT(J65) DA(I99):DT(J64) DG(I100):DC(J63) DG(I101):DC(J62) DT(I102):DA(J61) DG(I103):DC(J60) DG(I104):DC(J59) DG(I105):DC(J58) DA(I106):DT(J57) DG(I107):DC(J56) DC(I108):DG(J55) DT(I109):DA(J54) DG(I110):DC(J53) DC(I111):DG(J52) DC(I112):DG(J51) DA(I113):DT(J50) DT(I114):DA(J49) DC(I115):DG(J48) DA(I116):DT(J47) DC(I117):DG(J46) DT(I118):DA(J45) DC(I119):DG(J44) DA(I120):DT(J43) DG(I121):DC(J42) DA(I122):DT(J41) DA(I123):DT(J40) DT(I124):DA(J39) DT(I125):DA(J38) DG(I126):DC(J37) DT(I127):DA(J36) DC(I128):DG(J35) DC(I129):DG(J34) DA(I130):DT(J33) DG(I131):DC(J32) DC(I132):DG(J31) DA(I133):DT(J30) DG(I134):DC(J29) DG(I135):DC(J28) DG(I136):DC(J27) DA(I137):DT(J26) DT(I138):DA(J25) DT(I139):DA(J24) DG(I140):DC(J23) DT(I141):DA(J22) DG(I142):DC(J21) DC(I143):DG(J20) DA(I144):DT(J19) DA(I145):DT(J18) DG(I146):DC(J17) DC(I147):DG(J16) DT(I148):DA(J15) DT(I149):DA(J14) DG(I150):DC(J13) DT(I151):DA(J12) DG(I152):DC(J11) DA(I153):DT(J10) DA(I154):DT(J9) DT(I155):DA(J8) DA(I156):DT(J7) DA(I157):DT(J6) DA(I158):DT(J5) DG(I159):DC(J4) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge >8dk5_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF 187BP LIN28B NUCLEOSOME WITH SITE 0 MUTATION organism=? DNA sequence DC(J4):DG(I159) DT(J5):DA(I158) DT(J6):DA(I157) DT(J7):DA(I156) DA(J8):DT(I155) DT(J9):DA(I154) DT(J10):DA(I153) DC(J11):DG(I152) DA(J12):DT(I151) DC(J13):DG(I150) DA(J14):DT(I149) DA(J15):DT(I148) DG(J16):DC(I147) DC(J17):DG(I146) DT(J18):DA(I145) DT(J19):DA(I144) DG(J20):DC(I143) DC(J21):DG(I142) DA(J22):DT(I141) DC(J23):DG(I140) DA(J24):DT(I139) DA(J25):DT(I138) DT(J26):DA(I137) DC(J27):DG(I136) DC(J28):DG(I135) DC(J29):DG(I134) DT(J30):DA(I133) DG(J31):DC(I132) DC(J32):DG(I131) DT(J33):DA(I130) DG(J34):DC(I129) DG(J35):DC(I128) DA(J36):DT(I127) DC(J37):DG(I126) DA(J38):DT(I125) DA(J39):DT(I124) DT(J40):DA(I123) DT(J41):DA(I122) DC(J42):DG(I121) DT(J43):DA(I120) DG(J44):DC(I119) DA(J45):DT(I118) DG(J46):DC(I117) DT(J47):DA(I116) DG(J48):DC(I115) DA(J49):DT(I114) DT(J50):DA(I113) DG(J51):DC(I112) DG(J52):DC(I111) DC(J53):DG(I110) DA(J54):DT(I109) DG(J55):DC(I108) DC(J56):DG(I107) DT(J57):DA(I106) DC(J58):DG(I105) DC(J59):DG(I104) DC(J60):DG(I103) DA(J61):DT(I102) DC(J62):DG(I101) DC(J63):DG(I100) DT(J64):DA(I99) DT(J65):DA(I98) DT(J66):DA(I97) DC(J67):DG(I96) DC(J68):DG(I95) DT(J69):DA(I94) DT(J70):DA(I93) DC(J71):DG(I92) DT(J72):DA(I91) DT(J73):DA(I90) DC(J74):DG(I89) DC(J75):DG(I88) DT(J76):DA(I87) DT(J77):DA(I86) DC(J78):DG(I85) DA(J79):DT(I84) DC(J80):DG(I83) DT(J81):DA(I82) DT(J82):DA(I81) DA(J83):DT(I80) DG(J84):DC(I79) DA(J85):DT(I78) DC(J86):DG(I77) DT(J87):DA(I76) DA(J88):DT(I75) DC(J89):DG(I74) DA(J90):DT(I73) DT(J91):DA(I72) DT(J92):DA(I71) DT(J93):DA(I70) DA(J94):DT(I69) DT(J95):DA(I68) DT(J96):DA(I67) DC(J97):DG(I66) DA(J98):DT(I65) DG(J99):DC(I64) DC(J100):DG(I63) DA(J101):DT(I62) DT(J102):DA(I61) DC(J103):DG(I60) DT(J104):DA(I59) DG(J105):DC(I58) DT(J106):DA(I57) DA(J107):DT(I56) DT(J108):DA(I55) DT(J109):DA(I54) DG(J110):DC(I53) DT(J111):DA(I52) DT(J112):DA(I51) DG(J113):DC(I50) DG(J114):DC(I49) DA(J115):DT(I48) DG(J116):DC(I47) DT(J117):DA(I46) DA(J118):DT(I45) DA(J119):DT(I44) DG(J120):DC(I43) DT(J121):DA(I42) DT(J122):DA(I41) DC(J123):DG(I40) DC(J124):DG(I39) DA(J125):DT(I38) DT(J126):DA(I37) DG(J127):DC(I36) DT(J128):DA(I35) DT(J129):DA(I34) DA(J130):DT(I33) DA(J131):DT(I32) DT(J132):DA(I31) DA(J133):DT(I30) DC(J134):DG(I29) DT(J135):DA(I28) DC(J136):DG(I27) DA(J137):DT(I26) DC(J138):DG(I25) DC(J139):DG(I24) DA(J140):DT(I23) DC(J141):DG(I22) DT(J142):DA(I21) DG(J143):DC(I20) DA(J144):DT(I19) DG(J145):DC(I18) DG(J146):DC(I17) DA(J147):DT(I16) DT(J148):DA(I15) DT(J149):DA(I14) DC(J150):DG(I13) DT(J152):DA(I12) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) ILE40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/rdNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfg/akaksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/krsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlRDniqgitkpairrlarrggvkrisGliyeetrgvlkvflenvIrdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >8dlf_ABCD:Viral_DNA-binding_domain; title=EBNA1 DNA BINDING DOMAIN (DBD) (458-617)+2 REPEATS OF FAMILY REPEAT (FR) REGION organism=? DNA sequence DG(F1):DC(E56) DA(F2):DT(E55) DT(F3):DA(E54) DA(F4):DT(E53) DG(F5):DC(E52) DG(F6):DC(E51) DA(F7):DT(E50) DT(F8):DA(E49) DA(F9):DT(E48) DG(F10):DC(E47) DC(F11):DG(E46) DC(F12):DG(E45) DT(F13):DA(E44) DA(F14):DT(E43) DT(F15):DA(E42) DG(F16):DC(E41) DC(F17):DG(E40) DT(F18):DA(E39) DA(F19):DT(E38) DC(F20):DG(E37) DC(F21):DG(E36) DC(F22):DG(E35) DA(F23):DT(E34) DG(F24):DC(E33) DA(F25):DT(E32) DT(F26):DA(E31) DA(F27):DT(E30) DT(F28):DA(E29) DA(F29):DT(E28) DA(F30):DT(E27) DA(F31):DT(E26) DT(F32):DA(E25) DT(F33):DA(E24) DA(F34):DT(E23) DG(F35):DC(E22) DG(F36):DC(E21) DA(F37):DT(E20) DT(F38):DA(E19) DA(F39):DT(E18) DG(F40):DC(E17) DC(F41):DG(E16) DA(F42):DT(E15) DT(F43):DA(E14) DA(F44):DT(E13) DT(F45):DA(E12) DA(F46):DT(E11) DC(F47):DG(E10) DT(F48):DA(E9) DA(F49):DT(E8) DC(F50):DG(E7) DC(F51):DG(E6) DC(F52):DG(E5) DA(F53):DT(E4) DG(F54):DC(E3) DA(F55):DT(E2) DT(F56):DA(E1) chainA ( 2) ARG459 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) LYS460 0 0 0 0 0 0 3 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) LYS461 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) TRP464 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) PHE465 0 0 0 0 0 0 0 0 0 13 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LYS477 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) THR515 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) TYR518 0 0 0 0 0 0 0 0 0 0 2 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ASN519 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 6) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) PHE478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 3) LYS460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) PHE465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) PHE478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ARG522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 1) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 ( 4) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 7 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 11 0 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 58) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 ( 59) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 prot.sequence rRKKggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggskTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmvega/rkkggWFgkhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggskTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmve/rrKkggWFgkhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmv/KggWfgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmvega >8dlf_D:Viral_DNA-binding_domain; title=EBNA1 DNA BINDING DOMAIN (DBD) (458-617)+2 REPEATS OF FAMILY REPEAT (FR) REGION organism=? DNA sequence DG(F1):DC(E56) DA(F2):DT(E55) DT(F3):DA(E54) DA(F4):DT(E53) DG(F5):DC(E52) DG(F6):DC(E51) DA(F7):DT(E50) DT(F8):DA(E49) DA(F9):DT(E48) DG(F10):DC(E47) DC(F11):DG(E46) DC(F12):DG(E45) DT(F13):DA(E44) DA(F14):DT(E43) DT(F15):DA(E42) DG(F16):DC(E41) DC(F17):DG(E40) DT(F18):DA(E39) DA(F19):DT(E38) DC(F20):DG(E37) DC(F21):DG(E36) DC(F22):DG(E35) DA(F23):DT(E34) DG(F24):DC(E33) DA(F25):DT(E32) DT(F26):DA(E31) DA(F27):DT(E30) DT(F28):DA(E29) DA(F29):DT(E28) DA(F30):DT(E27) DA(F31):DT(E26) DT(F32):DA(E25) DT(F33):DA(E24) DA(F34):DT(E23) DG(F35):DC(E22) DG(F36):DC(E21) DA(F37):DT(E20) DT(F38):DA(E19) DA(F39):DT(E18) DG(F40):DC(E17) DC(F41):DG(E16) DA(F42):DT(E15) DT(F43):DA(E14) DA(F44):DT(E13) DT(F45):DA(E12) DA(F46):DT(E11) DC(F47):DG(E10) DT(F48):DA(E9) DA(F49):DT(E8) DC(F50):DG(E7) DC(F51):DG(E6) DC(F52):DG(E5) DA(F53):DT(E4) DG(F54):DC(E3) DA(F55):DT(E2) DT(F56):DA(E1) chainD ( 1) LYS461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 ( 4) TRP464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 9) ARG469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 7 0 0 0 0 0 0 0 0 0 0 0 ( 17) LYS477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 11 0 0 0 0 0 ( 54) LYS514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 55) THR515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 58) TYR518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 ( 59) ASN519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 prot.sequence KggWfgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmvega >8dmb_P: title=STRUCTURE OF DESULFOVIRGULA THERMOCUNICULI ISRB (DTISRB) IN COMPLEX WITH OMEGA RNA AND TARGET DNA organism=? DNA sequence DA(X2):DT(Y10) DT(X3):DA(Y9) DC(X4):DG(Y8) DA(X5):DT(Y7) DG(X6):DC(Y6) DC(X7):DG(Y5) DT(X8):DA(Y4) DC(X9):DG(Y3) DA(X10):DT(Y2) DA(X11):DT(Y1) chainP (244) ARG263 0 0 0 0 0 0 0 0 7 2 (292) THR311 0 0 0 0 0 0 3 0 0 0 (304) ARG323 0 0 0 0 0 0 1 10 12 0 (307) GLN326 0 0 0 0 0 1 10 2 0 0 prot.sequence trvpvvgvdgrplmpttprkarllirdglavprrnklglfyiqmlrpvgtrtqpvalavdpgakydgvavashrrvelramvflpddvprkmetrrnlrrarryrktprrparfdnrrrkgywlaptqrfkvearlkvvrelcriypvqlivtedvrfnhardrngkyfstveigktltyreyrklaelrlvevsetdawrerfgthandaaamlmgvtgcahnpaapffvwrrlryarrslfRqnpqkdgvrprfggtanggffrkgdwveaekagkvyrgwvcglptetTklvgvadadgkRigQfspkkvrllarstgfswkeva >8dq1_C:Pheromone-binding_domain_of_LuxR-like_quorum-sensing_transcription_factors;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=QUORUM-SENSING RECEPTOR RHLR BOUND TO PQSE organism=? DNA sequence DC(I2):DT(J18) DC(I3):DG(J16) DT(I4):DA(J15) DG(I5):DC(J14) DC(I6):DG(J13) DC(I7):DG(J12) DA(I8):DT(J11) DG(I9):DC(J10) DA(I10):DT(J9) DC(I11):DG(J8) DT(I12):DA(J7) DC(I14):DG(J5) DA(I15):DT(J4) DC(I16):DG(J3) DA(I17):DT(J2) chainC (210) SER210 0 0 11 2 0 0 0 0 0 0 0 0 0 0 0 (211) THR211 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 (213) ASN213 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (214) PHE214 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) HIS215 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) LYS217 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 prot.sequence mrndggfllwwdglrsemqpihdsqgvfavlekevrrlgfdyyaygvrhtipftrpktevhgtypkawleryqmqnygavdpailnglrssemvvwsdslfdqsrmlwneardwglcvgatlpirapnnllsvlsvardqqnissfereeirlrlrcmielltqkltdlehpmlmsnpvclshrereilqwtadgkssgeiaiilsiseSTvNFHhKniqkkfdapnktlaaayaaalgli >8dq1_CD:Pheromone-binding_domain_of_LuxR-like_quorum-sensing_transcription_factors;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=QUORUM-SENSING RECEPTOR RHLR BOUND TO PQSE organism=? DNA sequence DT(J2):DA(I17) DG(J3):DC(I16) DT(J4):DA(I15) DG(J5):DC(I14) DA(J7):DT(I12) DG(J8):DC(I11) DT(J9):DA(I10) DC(J10):DG(I9) DT(J11):DA(I8) DG(J12):DC(I7) DG(J13):DC(I6) DC(J14):DG(I5) DA(J15):DT(I4) DG(J16):DC(I3) DT(J18):DC(I2) chainC (210) SER210 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 (211) THR211 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 (213) ASN213 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (214) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (215) HIS215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (217) LYS217 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 chainD (207) SER210 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 (210) ASN213 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (211) PHE214 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) LYS217 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrndggfllwwdglrsemqpihdsqgvfavlekevrrlgfdyyaygvrhtipftrpktevhgtypkawleryqmqnygavdpailnglrssemvvwsdslfdqsrmlwneardwglcvgatlpirapnnllsvlsvardqqnissfereeirlrlrcmielltqkltdlehpmlmsnpvclshrereilqwtadgkssgeiaiilsiseSTvNFHhKniqkkfdapnktlaaayaaalgli/dggfllwwdglrsemqpihdsqgvfavlekevrrlgfdyyaygvrhtipftrpktevhgtypkawleryqmqnygavdpailnglrssemvvwsdslfdqsrmlwneardwglcvgatlpirapnnllsvlsvardqqnissfereeirlrlrcmielltqkltdlehpmlmsnpvclshrereilqwtadgkssgeiaiilsiseStvNFhhKniqkkfdapnktlaaayaaalgli >8dqw_BCDE: title=OPEN STATE OF RAD24-RFC:9-1-1 BOUND TO A 5' SS/DSDNA JUNCTION organism=? DNA sequence DG(J11) DG(J12) DA(J13) DA(J14) DG(J15) DG(J16) DA(J17) DG(J18) DC(J19) DG(J20) DT(J21) DT(J22) DT(J23) DT(J24) DT(J25) DT(J26) DT(J27) DT(J28) DT(J29) DT(J30) DT(J31) DT(J32) DT(J33) DT(J34) DT(J35) chainB chainC chainD chainE ( 79) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 81) ARG81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 prot.sequence lqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnqsnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnn/skenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahkltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenet/eqslaqqpwvekyrpknldevtaqdhavtvlkktlksanlphmlfygppgtgktstilaltkelygpdlmksrilelnasdergisivrekvknfarltvskpskhdlenypcppykiiildeadsmtadaqsalrrtmetysgvtrfclicnyvtriidplasrcskfrfkaldasnaidrlrfiseqenvkcddgvlerildisagdlrrgitllqsaskgaqylgdgknitstqveelagvvphdilieivekvksgdfdeikkyvntfmksgwsaasvvnqlheyyitndnfdtnfknqiswllfttdsrlnngtnehiqllnllvkisql/mslwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtaSnRklelnvvsspyhleitpsdmgnndriviqellkevaqmeqvdfqdskdglahrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgnkaifhlegfiakvmccld >8dqx_A:post-AAA+_oligomerization_domain-like;P-loop_containing_nucleoside_triphosphate_hydrolases; title=OPEN STATE OF RFC:PCNA BOUND TO A 3' SS/DSDNA JUNCTION organism=? DNA sequence DT(K1):DA(J8) DT(K2):DA(J7) DT(K3):DG(J6) DG(K4):DC(J5) DC(K5):DG(J4) DC(K6):DA(J3) DC(K7):DG(J2) DG(K8):DC(J1) DG(K9):DC(J0) DA(K10):DT(J-1) chainA (170) ASN459 0 5 0 0 0 0 0 0 0 0 (172) PRO461 0 4 0 0 0 0 0 0 0 0 (175) ARG464 0 0 1 0 2 0 0 0 0 0 (262) PRO551 0 1 0 0 0 0 0 0 0 0 (263) PHE552 18 7 0 0 0 0 0 0 0 0 (264) ASP553 4 0 0 0 0 0 0 0 0 0 (267) HIS556 2 0 0 0 0 0 0 0 0 0 (374) ARG663 6 0 0 0 0 0 0 0 0 0 (375) ILE664 2 0 0 0 0 0 0 0 0 0 (377) PHE666 0 8 11 0 0 0 0 0 0 0 (381) LEU670 0 0 21 0 0 0 0 0 0 0 (384) ASN673 0 2 0 0 0 0 0 0 0 0 (385) SER674 0 0 2 9 0 0 0 0 0 0 (387) SER676 1 0 0 0 0 0 0 0 0 0 (391) TYR680 48 0 0 0 0 0 0 0 0 0 (409) LYS698 7 0 0 0 0 0 0 0 0 0 prot.sequence vvreedklwtvkyaptnlqqvcgnkgsvmklknwlanwenskknsfkhagkdgsgvfraamlygppgigkttaahlvaqelgydileqnasdvrsktllnagvknaldnmsvvgyfkhneeaqnlngkhfviimdevdgmsggdrggvgqlaqfcrktstplilicnerNlPkmRpfdrvcldiqfrrpdansiksrlmtiairekfkldpnvidrliqttrgdirqvinllstistttktinhenineiskaweknialkPFDiaHkmldgqiysdigsrnftlndkialyfddfdftplmiqenylstrpsvlkpgqshleavaeaancislgdivekkirsseqlwsllplhavlssvypaskvaghmagRInFtawLgqNSkSakyYRllqeihyhtrlgtstdKiglrldylptfrkrlldpflkqgadaissvievmddyyltkedwdsimeffvgpdvttaiikkipatvksgftrkynsmthpvaiyrt >8dqx_BC: title=OPEN STATE OF RFC:PCNA BOUND TO A 3' SS/DSDNA JUNCTION organism=? DNA sequence DT(I1) DT(I2) DT(I3) DT(I4) DT(I5) DT(I6) chainB ( 44) MET50 0 0 0 0 13 8 ( 45) PRO51 0 0 0 0 3 0 (139) ASN145 0 0 0 0 5 0 (140) GLN146 0 0 0 16 14 0 (143) LYS149 0 0 5 5 0 0 (159) LYS165 0 0 0 0 0 5 (266) ARG272 0 0 0 0 0 1 (270) ASN276 0 0 0 0 0 3 chainC (150) PRO155 0 0 0 0 2 0 prot.sequence lqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgMPgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacNQsnKiieplqsrcailrysKlsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfRvtkNlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnn/ekrskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahkltPallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenet >8dqz_A:post-AAA+_oligomerization_domain-like;P-loop_containing_nucleoside_triphosphate_hydrolases; title=INTERMEDIATE STATE OF RFC:PCNA BOUND TO A 3' SS/DSDNA JUNCTION organism=? DNA sequence DC(J13):DG(I16) DC(J14):DG(I15) DC(J15):DG(I14) DC(J16):DG(I13) DG(J17):DC(I12) DG(J18):DC(I11) DG(J19):DC(I10) DG(J20):DC(I9) DC(J21):DG(I8) DC(J22):DG(I7) DC(J23):DG(I6) DC(J24):DG(I5) DC(J25):DG(I4) DC(J26):DG(I3) DC(J27):DG(I2) DG(J28):DC(I1) DG(J29):DT(I0) DC(J30):DT(I-1) chainA (140) ARG434 0 0 0 0 0 0 0 0 0 3 8 3 0 0 0 0 0 0 (288) PHE582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 (291) PHE585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (292) ASP586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (334) GLU628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (338) ARG632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 18 (342) GLN636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 8 0 (344) TRP638 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 2 0 prot.sequence vvreedklwtvkyaptnlqqvcgnkgsvmklknwlanwenskknsfkhagkdgsgvfraamlygppgigkttaahlvaqelgydileqnasdvrsktllnagvknaldnmsvvgyfkhnlngkhfviimdevdgmsggdRggvgqlaqfcrktstplilicnernlpkmrpfdrvcldiqfrrpdansiksrlmtiairekfkldpnvidrliqttrgdirqvinllstistttktinhenineiskaweknialkpfdiahkmldgqiysdigsrnftlndkialyFddFDftplmiqenylstrpsvlkpgqshleavaeaancislgdivEkkiRsseQlWsllplhavlssvypaskvaghmagrinftawlgqnsksakyyrllqeihyhtrlgtstdkiglrldylptfrkrlldpflkqgadaissvievmddyyltkedwdsimeffvgpdvttaiikkipatvksgftrkynsmthpvaiyrt >8dqz_ABCE: title=INTERMEDIATE STATE OF RFC:PCNA BOUND TO A 3' SS/DSDNA JUNCTION organism=? DNA sequence DC(J13):DG(I16) DC(J14):DG(I15) DC(J15):DG(I14) DC(J16):DG(I13) DG(J17):DC(I12) DG(J18):DC(I11) DG(J19):DC(I10) DG(J20):DC(I9) DC(J21):DG(I8) DC(J22):DG(I7) DC(J23):DG(I6) DC(J24):DG(I5) DC(J25):DG(I4) DC(J26):DG(I3) DC(J27):DG(I2) DG(J28):DC(I1) DG(J29):DT(I0) DC(J30):DT(I-1) chainA (140) ARG434 0 0 0 0 0 0 0 0 0 3 8 3 0 0 0 0 0 0 (288) PHE582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 (291) PHE585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (292) ASP586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (334) GLU628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (338) ARG632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 18 (342) GLN636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 8 0 (344) TRP638 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 2 0 chainB (143) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 chainC chainE prot.sequence vvreedklwtvkyaptnlqqvcgnkgsvmklknwlanwenskknsfkhagkdgsgvfraamlygppgigkttaahlvaqelgydileqnasdvrsktllnagvknaldnmsvvgyfkhnlngkhfviimdevdgmsggdRggvgqlaqfcrktstplilicnernlpkmrpfdrvcldiqfrrpdansiksrlmtiairekfkldpnvidrliqttrgdirqvinllstistttktinhenineiskaweknialkpfdiahkmldgqiysdigsrnftlndkialyFddFDftplmiqenylstrpsvlkpgqshleavaeaancislgdivEkkiRsseQlWsllplhavlssvypaskvaghmagrinftawlgqnsksakyyrllqeihyhtrlgtstdkiglrldylptfrkrlldpflkqgadaissvievmddyyltkedwdsimeffvgpdvttaiikkipatvksgftrkynsmthpvaiyrt/tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnQsnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnn/krskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanYahkltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenet/mslwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgnndriviqellkevaqmeqvdfqdskdglahrykcviineAnsltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgnkaifhlegfiakvmccld >8dr0_A:post-AAA+_oligomerization_domain-like;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CLOSED STATE OF RFC:PCNA BOUND TO A 3' SS/DSDNA JUNCTION organism=? DNA sequence DT(I-1):DC(J30) DT(I0):DG(J29) DC(I1):DG(J28) DG(I2):DC(J27) DG(I3):DC(J26) DG(I4):DC(J25) DG(I5):DC(J24) DG(I6):DC(J23) DG(I7):DC(J22) DG(I8):DC(J21) DC(I9):DG(J20) DC(I10):DG(J19) DC(I11):DG(J18) DC(I12):DG(J17) DG(I13):DC(J16) DG(I14):DC(J15) DG(I15):DC(J14) DG(I16):DC(J13) chainA (140) ARG434 0 0 0 0 0 0 6 11 7 0 0 0 0 0 0 0 0 0 (288) PHE582 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) PHE585 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ASP586 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) GLU628 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG632 16 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLN636 0 9 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) TRP638 0 3 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) LEU641 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vvreedklwtvkyaptnlqqvcgnkgsvmklknwlanwenskknsfkhagkdgsgvfraamlygppgigkttaahlvaqelgydileqnasdvrsktllnagvknaldnmsvvgyfkhnlngkhfviimdevdgmsggdRggvgqlaqfcrktstplilicnernlpkmrpfdrvcldiqfrrpdansiksrlmtiairekfkldpnvidrliqttrgdirqvinllstistttktinhenineiskaweknialkpfdiahkmldgqiysdigsrnftlndkialyFddFDftplmiqenylstrpsvlkpgqshleavaeaancislgdivEkkiRsseQlWslLplhavlssvypaskvaghmagrinftawlgqnsksakyyrllqeihyhtrlgtstdkiglrldylptfrkrlldpflkqgadaissvievmddyyltkedwdsimeffvgpdvttaiikkipatvksgftrkynsmthpvaiyrt >8dr0_ABCE: title=CLOSED STATE OF RFC:PCNA BOUND TO A 3' SS/DSDNA JUNCTION organism=? DNA sequence DT(I-1):DC(J30) DT(I0):DG(J29) DC(I1):DG(J28) DG(I2):DC(J27) DG(I3):DC(J26) DG(I4):DC(J25) DG(I5):DC(J24) DG(I6):DC(J23) DG(I7):DC(J22) DG(I8):DC(J21) DC(I9):DG(J20) DC(I10):DG(J19) DC(I11):DG(J18) DC(I12):DG(J17) DG(I13):DC(J16) DG(I14):DC(J15) DG(I15):DC(J14) DG(I16):DC(J13) chainA (140) ARG434 0 0 0 0 0 0 6 11 7 0 0 0 0 0 0 0 0 0 (288) PHE582 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) PHE585 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ASP586 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (334) GLU628 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) ARG632 16 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) GLN636 0 9 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) TRP638 0 3 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) LEU641 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (143) GLN146 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) ASN148 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) LYS149 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainE (336) ASN336 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vvreedklwtvkyaptnlqqvcgnkgsvmklknwlanwenskknsfkhagkdgsgvfraamlygppgigkttaahlvaqelgydileqnasdvrsktllnagvknaldnmsvvgyfkhnlngkhfviimdevdgmsggdRggvgqlaqfcrktstplilicnernlpkmrpfdrvcldiqfrrpdansiksrlmtiairekfkldpnvidrliqttrgdirqvinllstistttktinhenineiskaweknialkpfdiahkmldgqiysdigsrnftlndkialyFddFDftplmiqenylstrpsvlkpgqshleavaeaancislgdivEkkiRsseQlWslLplhavlssvypaskvaghmagrinftawlgqnsksakyyrllqeihyhtrlgtstdkiglrldylptfrkrlldpflkqgadaissvievmddyyltkedwdsimeffvgpdvttaiikkipatvksgftrkynsmthpvaiyrt/tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnQsNKiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnn/krskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanYaHKltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenetk/mslwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgnndriviqellkevaqmeqvdfqdskdglahrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgNkaifhlegfiakvmccld >8dr1_BCE: title=CONSENSUS CLOSED STATE OF RFC:PCNA BOUND TO A 3' SS/DSDNA JUNCTION (DNA2) organism=? DNA sequence DT(I11):DC(J30) DT(I12):DG(J29) DC(I13):DG(J28) DG(I14):DC(J27) DG(I15):DC(J26) DG(I16):DC(J25) DG(I17):DC(J24) DG(I18):DC(J23) DG(I19):DC(J22) DG(I20):DC(J21) DC(I21):DG(J20) DC(I22):DG(J19) DG(I23):DC(J18) DG(I24):DC(J17) DG(I25):DC(J16) DG(I26):DC(J15) DG(I27):DC(J14) DG(I28):DC(J13) chainB (143) GLN146 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) LYS149 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainE (103) ASN103 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ASN336 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnQsnKiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnn/krskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanYahKltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenetv/mslwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgNndriviqellkevaqmeqvdfqdskdglahrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgNkaifhlegfiakvmccld >8dr3_BCE: title=CLOSED STATE OF RFC:PCNA BOUND TO A 3' SS/DSDNA JUNCTION (DNA2) WITH NTD organism=? DNA sequence DT(I11):DC(J30) DT(I12):DG(J29) DC(I13):DG(J28) DG(I14):DC(J27) DG(I15):DC(J26) DG(I16):DC(J25) DG(I17):DC(J24) DG(I18):DC(J23) DG(I19):DC(J22) DG(I20):DC(J21) DC(I21):DG(J20) DC(I22):DG(J19) DG(I23):DC(J18) DG(I24):DC(J17) DG(I25):DC(J16) DG(I26):DC(J15) DG(I27):DC(J14) DG(I28):DC(J13) chainB (143) GLN146 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) LYS149 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainE (103) ASN103 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (336) ASN336 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnQsnKiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnn/krskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanYahKltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenetv/mslwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgNndriviqellkevaqmeqvdfqdskdglahrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgNkaifhlegfiakvmccld >8dr4_A:post-AAA+_oligomerization_domain-like;P-loop_containing_nucleoside_triphosphate_hydrolases; title=OPEN STATE OF RFC:PCNA BOUND TO A 3' SS/DSDNA JUNCTION (DNA2) WITHOUT NTD organism=? DNA sequence DC(L1):DG(K10) DC(L2):DG(K9) DC(L3):DG(K8) DC(L4):DG(K7) DC(L5):DG(K6) DC(L6):DG(K5) DC(L7):DG(K4) DC(L8):DG(K3) DC(L9):DG(K2) DC(L10):DG(K1) DT(L11):DA(K0) DT(L12):DA(K-1) chainA (170) ASN459 0 0 0 0 0 0 0 0 0 0 0 4 (187) ARG476 0 0 0 0 0 0 0 2 0 0 0 0 (261) LYS550 0 0 0 0 0 0 0 0 0 0 0 2 (262) PRO551 0 0 0 0 0 0 0 0 0 0 0 1 (263) PHE552 0 0 0 0 0 0 0 0 0 0 39 7 (267) HIS556 0 0 0 0 0 0 0 0 0 0 12 0 (374) ARG663 0 0 0 0 0 0 0 0 0 2 5 0 (375) ILE664 0 0 0 0 0 0 0 0 0 0 12 0 prot.sequence vvreedklwtvkyaptnlqqvcgnkgsvmklknwlanwenskknsfkhagkdgsgvfraamlygppgigkttaahlvaqelgydileqnasdvrsktllnagvknaldnmsvvgyfkhneeaqnlngkhfviimdevdgmsggdrggvgqlaqfcrktstplilicnerNlpkmrpfdrvcldiqfRrpdansiksrlmtiairekfkldpnvidrliqttrgdirqvinllstistttktinhenineiskaweknialKPFdiaHkmldgqiysdigsrnftlndkialyfddfdftplmiqenylstrpsvlkpgqshleavaeaancislgdivekkirsseqlwsllplhavlssvypaskvaghmagRInftawlgqnsksakyyrllqeihyhtrlgtstdkiglrldylptfrkrlldpflkqgadaissvievmddyyltkedwdsimeffvgpdvttaiikkipatvksgftrkynsmthpvaiyrt >8dr4_BCE: title=OPEN STATE OF RFC:PCNA BOUND TO A 3' SS/DSDNA JUNCTION (DNA2) WITHOUT NTD organism=? DNA sequence DC(J13):DG(I28) DC(J14):DG(I27) DC(J15):DG(I26) DC(J16):DG(I25) DC(J17):DG(I24) DC(J18):DG(I23) DG(J19):DC(I22) DG(J20):DC(I21) DC(J21):DG(I20) DC(J22):DG(I19) DC(J23):DG(I18) DC(J24):DG(I17) DC(J25):DG(I16) DC(J26):DG(I15) DC(J27):DG(I14) DG(J28):DC(I13) DG(J29):DT(I12) DC(J30):DT(I11) chainB chainC chainE (102) ASN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 (335) ASN336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 prot.sequence tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnqsnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnn/ekrskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahkltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenet/slwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgNndriviqellkevaqmeqvdfqdskdglahrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgNkaifhlegfiakvmccl >8dr5_BCE: title=OPEN STATE OF RFC:PCNA BOUND TO A 3' SS/DSDNA JUNCTION (DNA2) WITH NTD organism=? DNA sequence DG(J19):DC(I22) DG(J20):DC(I21) DC(J21):DG(I20) DC(J22):DG(I19) DC(J23):DG(I18) DC(J24):DG(I17) DC(J25):DG(I16) DC(J26):DG(I15) DC(J27):DG(I14) DG(J28):DC(I13) DG(J29):DT(I12) DC(J30):DT(I11) chainB chainC chainE (102) ASN103 0 0 0 0 0 0 0 0 0 0 4 0 (335) ASN336 0 0 0 0 0 0 0 0 0 0 7 0 prot.sequence tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnqsnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnn/ekrskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanyahkltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenet/slwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgNndriviqellkevaqmeqvdfqdskdglahrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgNkaifhlegfiakvmccl >8dr6_BCE: title=CLOSED STATE OF RFC:PCNA BOUND TO A NICKED DSDNA organism=? DNA sequence DC(J13):DG(I32) DC(J14):DG(I31) DC(J15):DG(I30) DC(J16):DG(I29) DC(J17):DG(I28) DC(J18):DG(I27) DG(J19):DC(I26) DG(J20):DC(I25) DC(J21):DG(I24) DC(J22):DG(I23) DC(J23):DG(I22) DC(J24):DG(I21) DC(J25):DG(I20) DC(J26):DG(I19) DC(J27):DG(I18) DG(J28):DC(I17) DG(J29):DT(I16) DC(J30):DT(I15) chainB (143) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (146) LYS149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 chainC chainE (103) ASN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (336) ASN336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnQsnKiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnn/krskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlanYahKltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenetv/mslwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgNndriviqellkevaqmeqvdfqdskdglahrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgNkaifhlegfiakvmccld >8dr7_BCE: title=OPEN STATE OF RFC:PCNA BOUND TO A NICKED DSDNA organism=? DNA sequence DT(I15):DC(J30) DT(I16):DG(J29) DC(I17):DG(J28) DG(I18):DC(J27) DG(I19):DC(J26) DG(I20):DC(J25) DG(I21):DC(J24) DG(I22):DC(J23) DG(I23):DC(J22) DG(I24):DC(J21) DC(I25):DG(J20) DC(I26):DG(J19) chainB (143) GLN146 3 0 0 0 0 0 0 0 0 0 0 0 chainC chainE (102) ASN103 0 3 0 0 0 0 0 0 0 0 0 0 (335) ASN336 0 7 0 0 0 0 0 0 0 0 0 0 prot.sequence tlslqlpwvekyrpqvlsdivgnketidrlqqiakdgnmphmiisgmpgigkttsvhclahellgrsyadgvlelnasddrgidvvrnqikhfaqkklhlppgkhkivildeadsmtagaqqalrrtmelysnstrfafacnQsnkiieplqsrcailrysklsdedvlkrllqiikledvkytndgleaiiftaegdmrqainnlqstvaghglvnadnvfkivdsphplivkkmllasnledsiqilrtdlwkkgyssidivttsfrvtknlaqvkesvrlemikeiglthmrilegvgtylqlasmlakihklnn/ekrskenlpwvekyrpetldevygqnevittvrkfvdegklphllfygppgtgktstivalareiygknysnmvlelnasddrgidvvrnqikdfastrqifskgfkliildeadamtnaaqnalrrvierytkntrfcvlaNyahkltpallsrctrfrfqplpqeaierrianvlvheklklspnaekalielsngdmrrvlnvlqsckatldnpdedeisddviyeccgaprpsdlkavlksileddwgtahytlnkvrsakglalidliegivkiledyelqneetrvhlltkladieysiskggndqiqgsavigaikasfenet/slwvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgpgvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgNndriviqellkevaqmeqvdfqdskdglahrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiksrcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmalnnelalkssspiikpdwiivihkltrkivkersvnsliecravlydllahcipaniilkeltfslldvetlnttnkssiieyssvfderlslgNkaifhlegfiakvmccl >8dtp_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CLOSE STATE OF T4 BACTERIOPHAGE GP41 HEXAMER BOUND WITH SINGLE STRAND DNA organism=? DNA sequence DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) DT(M17) chainA (322) ARG322 2 0 0 0 0 0 0 0 0 0 0 0 chainB chainC (327) ASN327 0 0 0 0 0 1 1 0 0 0 0 0 chainD (327) ASN327 0 0 0 0 4 0 0 0 0 0 0 0 chainE (327) ASN327 0 0 5 0 0 0 0 0 0 0 0 0 chainF (327) ASN327 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscriRvysensyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscriRvysensyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie >8dtp_F:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CLOSE STATE OF T4 BACTERIOPHAGE GP41 HEXAMER BOUND WITH SINGLE STRAND DNA organism=? DNA sequence DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) DT(M17) chainF (327) ASN327 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie >8du4_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=COMPLEX BETWEEN RBBP5-WDR5 AND AN H2B-UBIQUITINATED NUCLEOSOME organism=? DNA sequence DA(J151):DT(I147) DT(J152):DA(I146) DC(J153):DG(I145) DG(J154):DC(I144) DG(J155):DC(I143) DA(J156):DT(I142) DT(J157):DA(I141) DG(J158):DC(I140) DT(J159):DA(I139) DA(J160):DT(I138) DT(J161):DA(I137) DA(J162):DT(I136) DT(J163):DA(I135) DA(J164):DT(I134) DT(J165):DA(I133) DC(J166):DG(I132) DT(J167):DA(I131) DG(J168):DC(I130) DA(J169):DT(I129) DC(J170):DG(I128) DA(J171):DT(I127) DC(J172):DG(I126) DG(J173):DC(I125) DT(J174):DA(I124) DG(J175):DC(I123) DC(J176):DG(I122) DC(J177):DG(I121) DT(J178):DA(I120) DG(J179):DC(I119) DG(J180):DC(I118) DA(J181):DT(I117) DG(J182):DC(I116) DA(J183):DT(I115) DC(J184):DG(I114) DT(J185):DA(I113) DA(J186):DT(I112) DG(J187):DC(I111) DG(J188):DC(I110) DG(J189):DC(I109) DA(J190):DT(I108) DT(J192):DC(I107) DA(J193):DT(I105) DA(J194):DT(I104) DT(J195):DA(I103) DC(J196):DG(I102) DC(J197):DG(I101) DC(J198):DG(I100) DC(J199):DG(I99) DT(J200):DA(I98) DT(J201):DA(I97) DG(J202):DC(I96) DG(J203):DC(I95) DC(J204):DG(I94) DG(J205):DC(I93) DG(J206):DC(I92) DT(J207):DA(I91) DT(J208):DA(I90) DA(J209):DT(I89) DA(J210):DT(I88) DA(J211):DT(I87) DA(J212):DT(I86) DC(J213):DG(I85) DG(J214):DC(I84) DC(J215):DG(I83) DG(J216):DC(I82) DG(J217):DC(I81) DG(J218):DC(I80) DG(J219):DC(I79) DG(J220):DC(I78) DA(J221):DT(I77) DC(J222):DG(I76) DA(J223):DT(I75) DG(J224):DC(I74) DC(J225):DG(I73) DG(J226):DC(I72) DC(J227):DG(I71) DG(J228):DC(I70) DT(J229):DA(I69) DA(J230):DT(I68) DC(J231):DG(I67) DG(J232):DC(I66) DT(J233):DA(I65) DG(J234):DC(I64) DC(J235):DG(I63) DG(J236):DC(I62) DT(J237):DA(I61) DT(J238):DA(I60) DT(J239):DA(I59) DA(J240):DT(I58) DA(J241):DT(I57) DG(J242):DC(I56) DC(J243):DG(I55) DG(J244):DC(I54) DG(J245):DC(I53) DT(J246):DA(I52) DG(J247):DC(I51) DC(J248):DG(I50) DT(J249):DA(I49) DA(J250):DT(I48) DG(J251):DC(I47) DA(J252):DT(I46) DG(J253):DC(I45) DC(J254):DG(I44) DT(J255):DA(I43) DG(J256):DC(I42) DT(J257):DA(I41) DC(J258):DG(I40) DT(J259):DA(I39) DA(J260):DT(I38) DC(J261):DG(I37) DG(J262):DC(I36) DA(J263):DT(I35) DC(J264):DG(I34) DC(J265):DG(I33) DA(J267):DT(I32) DT(J268):DT(I31) DT(J269):DA(I29) DG(J270):DC(I28) DA(J271):DT(I27) DG(J272):DC(I26) DC(J273):DG(I25) DG(J274):DC(I24) DG(J275):DC(I23) DC(J276):DG(I22) DC(J277):DG(I21) DT(J278):DA(I20) DC(J279):DG(I19) DG(J280):DC(I18) DG(J281):DC(I17) DC(J282):DG(I16) DA(J283):DT(I15) DC(J284):DG(I14) DC(J285):DG(I13) DG(J286):DC(I12) DG(J287):DC(I11) DG(J288):DC(I10) DA(J289):DT(I9) DT(J290):DA(I8) DT(J291):DA(I7) DC(J292):DG(I6) DT(J293):DA(I5) DC(J294):DG(I4) DG(J295):DC(I3) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC (105) LYS119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 chainD ( 1) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) ARG27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainF ( 56) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavalqeaseaylvalfedtnlcaihakrvtipkdiqlarrirger/kvLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/ktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkKt/RRktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa/RYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavalqeaseaylvalfedtnlcaihakrvtipkdiqlarrirger/rdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakRktvtamdvvyalkrqgrtlygfg/KaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/KtrkesyaiyvykvlkqvhpdtgisskamSimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsak >8due_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=OPEN STATE OF T4 BACTERIOPHAGE GP41 HEXAMER BOUND WITH SINGLE STRAND DNA organism=? DNA sequence DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) chainA chainB (327) ASN327 0 0 0 0 0 0 0 1 2 0 chainC chainD (327) ASN327 0 0 0 1 1 0 0 0 0 0 chainE (327) ASN327 0 3 4 0 0 0 0 0 0 0 chainF (327) ASN327 9 0 0 0 0 0 0 0 0 0 prot.sequence mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvysensyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie >8due_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=OPEN STATE OF T4 BACTERIOPHAGE GP41 HEXAMER BOUND WITH SINGLE STRAND DNA organism=? DNA sequence DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) chainB (327) ASN327 0 0 0 0 0 0 0 1 2 0 prot.sequence mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie >8dvf_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=T4 BACTERIOPHAGE PRIMOSOME WITH SINGLE STRAND DNA, STATE 1 organism=? DNA sequence DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) DT(M17) chainA (322) ARG322 11 8 0 0 0 0 0 0 0 0 0 0 chainB chainC (327) ASN327 0 0 0 0 0 1 1 0 0 0 0 0 chainD (327) ASN327 0 0 0 0 4 0 0 0 0 0 0 0 chainE (327) ASN327 0 0 5 0 0 0 0 0 0 0 0 0 chainF (327) ASN327 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscriRvysensyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscriRvysensyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie >8dvf_H:DNA_primase_core;Zinc_beta-ribbon; title=T4 BACTERIOPHAGE PRIMOSOME WITH SINGLE STRAND DNA, STATE 1 organism=? DNA sequence DG(T2008) DG(T2009) DC(T2010) DT(T2011) DG(T2012) chainH ( 32) ARG34 2 7 0 0 0 ( 49) ARG51 0 1 2 0 0 ( 51) TRP53 0 2 10 0 0 ( 53) TYR55 0 0 0 21 0 ( 56) ASN58 0 0 0 1 3 ( 60) ASN62 0 0 0 1 1 ( 62) HIS64 0 0 0 22 0 ( 64) TYR66 0 0 39 3 0 ( 69) HIS71 0 0 0 8 6 (260) LYS279 0 0 0 0 1 prot.sequence sipwidnefayralahlpkftqvnnsstfklRfrcpvcgdsktdqnkaRgWyYgdNnegNiHcYncnyHapigiylkefepdlyreyifeirkekkkiikslpscvrldklaedhpiikyvkarcipkdkwkylwfttewpklvnsiapgtykkeiseprlvipiynangkaesfqgralkkdapqkyitieaypeatkiygvervkdgdvyvlegpidslfiengiaitggqldlevvpfkdrrvwvldneprhpdtiKrmtklvdagervmfwdkspwkskdvndmirkegatpeqimeymknniaqglmakmrlskyak >8dvp_A:DNA-glycosylase;Nudix; title=GLYCOSYLASE MUTY VARIANT N146S IN COMPLEX WITH DNA CONTAINING D(8-OXO- G) PAIRED WITH SUBSTRATE PURINE organism=Geobacillus stearothermophilus DNA sequence DG(C13):DC(B11) DT(C14):DA(B10) DC(C15):DG(B9) DC(C16):DG(B8) DA(C17):DT(B7) PRN(C18):8OG(B6) DG(C19):DC(B5) DT(C20):DA(B4) DC(C21):DG(B3) DT(C22):DA(B2) chainA ( 20) ARG26 0 0 0 0 0 5 0 0 0 0 ( 25) ARG31 0 0 0 0 0 1 0 0 0 0 ( 37) GLU43 0 0 0 0 0 5 0 0 0 0 ( 40) LEU46 0 0 0 0 0 6 0 0 0 0 ( 42) GLN48 0 0 0 0 10 4 27 0 0 0 ( 43) THR49 0 0 0 0 0 5 0 0 0 0 ( 44) ARG50 0 0 2 3 0 0 0 0 0 0 ( 45) VAL51 0 0 0 0 0 5 0 0 0 0 ( 82) TYR88 0 0 0 0 0 42 38 0 0 0 ( 85) ARG91 0 0 0 0 0 1 0 0 0 0 (120) TYR126 0 0 0 0 0 3 0 0 0 0 (138) ASP144 0 0 0 0 0 3 0 0 0 0 (158) PRO164 0 0 0 0 0 0 0 0 0 2 (185) ILE191 0 0 0 0 0 9 0 0 0 0 (186) GLU192 0 0 0 0 0 2 0 0 0 0 (189) ALA195 0 0 0 0 0 2 0 0 0 0 (297) PHE307 0 0 0 0 0 3 0 0 0 0 (298) SER308 0 0 0 0 8 9 4 0 0 0 (299) HIS309 0 0 0 0 0 0 6 0 0 0 prot.sequence rfparefqrdlldwfarerrdlpwrkdrdpykvwvsevmlQQtRvetvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavdgsvmrvlsrlflvtddiakPstrkrfeqivreimayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqvplavavladdegrvlirkrdstgllanlwefpscetdgadgkekleqmvgeqveltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >8dvy_A:DNA-glycosylase;Nudix; title=DNA GLYCOSYLASE MUTY VARIANT N146S IN COMPLEX WITH DNA CONTAINING D(8- OXO-G) PAIRED WITH AN ENZYME-GENERATED ABASIC SITE PRODUCT (AP) AND CRYSTALIZED WITH CALCIUM ACETATE organism=Geobacillus stearothermophilus DNA sequence DA(B2):DT(C22) DG(B3):DC(C21) DA(B4):DT(C20) DC(B5):DG(C19) 8OG(B6):AAB(C18) DT(B7):DA(C17) DG(B8):DC(C16) DG(B9):DC(C15) DA(B10):DT(C14) DC(B11):DG(C13) chainA ( 42) GLN48 0 0 0 42 4 1 0 0 0 0 ( 43) THR49 0 0 0 0 4 0 0 0 0 0 ( 44) ARG50 0 0 0 0 0 0 2 7 0 0 ( 82) TYR88 0 0 0 68 38 0 0 0 0 0 ( 85) ARG91 0 0 0 0 1 0 0 0 0 0 (297) ALA306 0 0 0 0 0 1 0 0 0 0 (298) PHE307 0 0 0 0 3 0 0 0 0 0 (299) SER308 0 0 0 8 9 3 0 0 0 0 (300) HIS309 0 0 0 12 0 0 0 0 0 0 prot.sequence rfparefqrdlldwfarerrdlpwrkdrdpykvwvsevmlqQtRvetvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavdgsvmrvlsrlflvtddiakpstrkrfeqivreimayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqvplavavladdegrvlirkrdstgllanlwefpscetdadgkekleqmvgeqlqveltepivsfehAfSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >8dw0_A:DNA-glycosylase;Nudix; title=GLYCOSYLASE MUTY VARIANT N146S IN COMPLEX WITH DNA CONTAINING D(8-OXO- G) PAIRED WITH AN ENZYME-GENERATED ABASIC SITE (AP) PRODUCT AND CRYSTALLIZED WITH SODIUM ACETATE organism=Geobacillus stearothermophilus DNA sequence DA(B2):DT(C22) DG(B3):DC(C21) DA(B4):DT(C20) DC(B5):DG(C19) 8OG(B6):AAB(C18) DT(B7):DA(C17) DG(B8):DC(C16) DG(B9):DC(C15) DA(B10):DT(C14) DC(B11):DG(C13) chainA ( 42) GLN48 0 0 0 24 4 5 0 0 0 0 ( 43) THR49 0 0 0 0 5 0 0 0 0 0 ( 44) ARG50 0 0 0 0 0 2 9 9 0 0 ( 82) TYR88 0 0 0 76 37 0 0 0 0 0 ( 85) ARG91 0 0 0 0 1 0 0 0 0 0 (300) PHE307 0 0 0 0 2 0 0 0 0 0 (301) SER308 0 0 0 10 9 2 0 0 0 0 (302) HIS309 0 0 0 10 0 0 0 0 0 0 prot.sequence rfparefqrdlldwfarerrdlpwrkdrdpykvwvsevmlQQtRvetvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavdgsvmrvlsrlflvtddiakpstrkrfeqivreimayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqvplavavladdegrvlirkrdstgllanlwefpscetdgadgkekleqmvgeqglqveltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >8dw1_A:DNA/RNA_polymerases; title=CRYSTAL STRUCTURE OF A HOST-GUEST COMPLEX WITH 5'-CTTAGTTATAACTAAG-3' organism=Moloney murine leukemia virus DNA sequence DT(G9):DA(D8) DA(G10):DT(D7) DA(G11):DT(D6) DC(G12):DG(D5) DT(G13):DA(D4) DA(G14):DT(D3) DA(G15):DT(D2) DG(G16):DC(D1) chainA ( 41) TYR64 0 0 0 0 0 0 0 3 ( 76) LEU99 0 0 0 0 0 0 0 22 ( 77) PRO100 0 0 0 0 0 0 0 3 ( 78) VAL101 0 0 0 0 0 0 0 1 ( 84) ASP114 0 0 0 0 0 0 0 11 ( 86) ARG116 0 0 0 0 0 3 9 7 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLPVyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrsgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >8dw4_A:DNA-glycosylase;Nudix; title=GLYCOSYLASE MUTY VARIANT N146S IN COMPLEX WITH DNA CONTAINING D(8-OXO- G) PAIRED WITH AN ABASIC SITE PRODUCT (AP) GENERATED BY THE ENZYME IN CRYSTALS BY REMOVAL OF CALCIUM organism=Geobacillus stearothermophilus DNA sequence DA(B2):DT(C22) DG(B3):DC(C21) DA(B4):DT(C20) DC(B5):DG(C19) 8OG(B6):AAB(C18) DT(B7):DA(C17) DG(B8):DC(C16) DG(B9):DC(C15) DA(B10):DT(C14) DC(B11):DG(C13) chainA ( 42) GLN48 0 0 0 30 4 3 0 0 0 0 ( 43) THR49 0 0 0 0 4 0 0 0 0 0 ( 44) ARG50 0 0 0 0 0 1 2 0 0 0 ( 82) TYR88 0 0 0 76 43 0 0 0 0 0 ( 85) ARG91 0 0 0 0 2 0 0 0 0 0 (295) PHE307 0 0 0 0 1 0 0 0 0 0 (296) SER308 0 0 0 8 9 2 0 0 0 0 (297) HIS309 0 0 0 12 0 0 0 0 0 0 prot.sequence rfparefqrdlldwfarerrdlpwrkdrdpykvwvsevmlQQtRvetvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavdgsvmrvlsrlflvtddiakpstrkrfeqivreimayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqvplavavladdegrvlirkrdstgllanlwefpscetddgkekleqmvgeqveltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >8dw6_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=T4 BACTERIOPHAGE PRIMOSOME WITH SINGLE-STRAND DNA, STATE 3 organism=? DNA sequence DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) DT(M17) chainA (322) ARG322 2 0 0 0 0 0 0 0 0 0 0 0 chainB chainC (327) ASN327 0 0 0 0 0 1 1 0 0 0 0 0 chainD (327) ASN327 0 0 0 0 4 0 0 0 0 0 0 0 chainE (327) ASN327 0 0 5 0 0 0 0 0 0 0 0 0 chainF (327) ASN327 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscriRvysensyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscriRvysensyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie >8dw6_F:P-loop_containing_nucleoside_triphosphate_hydrolases; title=T4 BACTERIOPHAGE PRIMOSOME WITH SINGLE-STRAND DNA, STATE 3 organism=? DNA sequence DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) DT(M17) chainF (327) ASN327 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismemaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie >8dw7_A:DNA-glycosylase;Nudix; title=DNA GLYCOSYLASE MUTY VARIANT N146S IN COMPLEX WITH DNA CONTAINING THE TRANSITION STATE ANALOG 1N PAIRED WITH D(8-OXO-G) organism=Geobacillus stearothermophilus DNA sequence DA(B2):DT(C22) DG(B3):DC(C21) DA(B4):DT(C20) DC(B5):DG(C19) 8OG(B6):NR1(C18) DT(B7):DA(C17) DG(B8):DC(C16) DG(B9):DC(C15) DA(B10):DT(C14) DC(B11):DG(C13) chainA ( 44) GLN48 0 0 0 46 4 10 0 0 0 0 ( 45) THR49 0 0 0 0 4 0 0 0 0 0 ( 46) ARG50 0 0 0 0 0 1 0 9 0 0 ( 84) TYR88 0 0 0 80 45 0 0 0 0 0 ( 87) ARG91 0 0 0 0 1 0 0 0 0 0 (300) PHE307 0 0 0 0 3 0 0 0 0 0 (301) SER308 0 0 0 6 9 1 0 0 0 0 (302) HIS309 0 0 0 14 0 0 0 0 0 0 prot.sequence terfparefqrdlldwfarerrdlpwrkdrdpykvwvsevmlQQtRvetvipyfeqfidrfptlealadadedevlkaweglgYySrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavdgsvmrvlsrlflvtddiakpstrkrfeqivreimayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqvplavavladdervlirkrdstgllanlwefpscetadgkekleqmvgeqyglqveltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewa >8dw8_A:DNA/RNA_polymerases; title=HOST-GUEST STRUCTURE OF BLMA2 PARTIALLY BOUND TO 5'-ATTAGTTATAACTAAT- 3' organism=Moloney murine leukemia virus DNA sequence DA(G10):DT(B7) DA(G11):DT(B6) DC(G12):DG(B5) DT(G13):DA(B4) DA(G14):DT(B3) DA(G15):DT(B2) DT(G16):DA(B1) chainA ( 41) TYR64 0 0 0 0 0 0 1 ( 76) LEU99 0 0 0 0 0 0 20 ( 86) VAL112 0 0 0 0 0 0 2 ( 88) ASP114 0 0 0 0 0 0 7 ( 90) ARG116 0 0 0 0 3 11 8 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvktndyrpVqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpemgisgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >8dwd_A:DNA-glycosylase;Nudix; title=ADENINE GLYCOSYLASE MUTY VARIANT E43S IN COMPLEX WITH DNA CONTAINING D(8-OXO-G) PAIRED WITH AN AP SITE GENERATED BY THE ENZYME ACTING ON PURINE organism=Geobacillus stearothermophilus DNA sequence DA(B2):DT(C22) DG(B3):DC(C21) DA(B4):DT(C20) DC(B5):DG(C19) 8OG(B6):ORP(C18) DT(B7):DA(C17) DG(B8):DC(C16) DG(B9):DC(C15) DA(B10):DT(C14) DC(B11):DG(C13) chainA ( 39) LEU46 0 0 0 0 8 0 0 0 0 0 ( 41) GLN48 0 0 0 54 5 8 0 0 0 0 ( 42) THR49 0 0 0 0 5 0 0 0 0 0 ( 43) ARG50 0 0 0 0 0 1 2 8 0 0 ( 44) VAL51 0 0 0 0 1 0 0 0 0 0 ( 81) TYR88 0 0 0 78 42 0 0 0 0 0 ( 84) ARG91 0 0 0 0 2 0 0 0 0 0 (119) TYR126 0 0 0 0 10 0 0 0 0 0 (137) ASP144 0 0 0 0 15 0 0 0 0 0 (139) ASN146 0 0 0 0 2 0 0 0 0 0 (184) ILE191 0 0 0 0 4 0 0 0 0 0 (293) PHE307 0 0 0 0 3 0 0 0 0 0 (294) SER308 0 0 0 8 9 3 0 0 0 0 (295) HIS309 0 0 0 10 0 0 0 0 0 0 prot.sequence parefqrdlldwfarerrdlpwrkdrdpykvwvssvmlQQtRvetvipyfeqfidrfptlealadadedevlkaweglgYySrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavdgnvmrvlsrlflvtddiakpstrkrfeqivreimayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqvplavavladdegrvlirkrdstgllanlwefpscetddgkekleqmvgeeltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas >8dwe_D:DNA-glycosylase;Nudix; title=ADENINE GLYCOSYLASE MUTY VARIANT E43Q IN COMPLEX WITH DNA CONTAINING D(8-OXO-G) PAIRED WITH SUBSTRATE PURINE organism=Geobacillus stearothermophilus DNA sequence DG(F13):DC(E11) DT(F14):DA(E10) DC(F15):DG(E9) DC(F16):DG(E8) DA(F17):DT(E7) PRN(F18):8OG(E6) DG(F19):DC(E5) DT(F20):DA(E4) DC(F21):DG(E3) DT(F22):DA(E2) chainD ( 23) ARG26 0 0 0 0 0 2 0 0 0 0 ( 27) TRP30 0 0 0 0 0 2 0 0 0 0 ( 28) ARG31 0 0 0 0 0 4 0 0 0 0 ( 40) GLN43 0 0 0 0 0 9 0 0 0 0 ( 43) LEU46 0 0 0 0 0 9 0 0 0 0 ( 45) GLN48 0 0 0 0 14 4 25 0 0 0 ( 46) THR49 0 0 0 0 0 4 0 0 0 0 ( 47) ARG50 0 0 4 0 2 0 0 0 0 0 ( 48) VAL51 0 0 0 0 0 3 0 0 0 0 ( 85) TYR88 0 0 0 0 0 41 46 0 0 0 ( 88) ARG91 0 0 0 0 0 1 0 0 0 0 (123) TYR126 0 0 0 0 0 5 0 0 0 0 (141) ASP144 0 0 0 0 0 1 0 0 0 0 (143) ASN146 0 0 0 0 0 1 0 0 0 0 (185) GLU188 0 0 0 0 0 5 0 0 0 0 (188) ILE191 0 0 0 0 0 9 0 0 0 0 (198) ARG201 0 1 3 0 0 0 0 0 0 0 (301) ALA306 0 0 0 0 2 0 0 0 0 0 (302) PHE307 0 0 0 0 0 3 0 0 0 0 (303) SER308 0 0 0 0 2 9 4 0 0 0 (304) HIS309 0 0 0 0 0 0 6 0 0 0 prot.sequence eterfparefqrdlldwfarerrdlpwrkdrdpykvwvsqvmlQQtRvetvipyfeqfidrfptlealadadedevlkaweglgYySrvrnlhaavkevktryggkvpddpdefsrlkgvgpytvgavlslaygvpepavdgnvmrvlsrlflvtddiakpstrkrfeqivreimayenpgafnealielgalvctpRrpscllcpvqaycqafaegvaeelpvkmkktavkqvplavavladdegrvlirkrdstgllanlwefpscetdgadgkekleqmvgeglqveltepivsfehAfSHlvwqltvfpgrlvhveepyrlapedelkayafpvshqrvwreykewas >8dwf_A:DNA-glycosylase;Nudix; title=GLYCOSYLASE MUTY VARIANT E43S IN COMPLEX WITH DNA CONTAINING D(8-OXO- G) PAIRED WITH SUBSTRATE ADENINE organism=Geobacillus stearothermophilus DNA sequence DA(B2):DT(C22) DG(B3):DC(C21) DA(B4):DT(C20) DC(B5):DG(C19) 8OG(B6):DA(C18) DT(B7):DA(C17) DG(B8):DC(C16) DG(B9):DC(C15) DA(B10):DT(C14) DC(B11):DG(C13) chainA ( 25) TRP30 0 0 0 0 6 0 0 0 0 0 ( 26) ARG31 0 0 0 0 3 0 0 0 0 0 ( 38) SER43 0 0 0 0 1 0 0 0 0 0 ( 41) LEU46 0 0 0 0 9 0 0 0 0 0 ( 43) GLN48 0 0 0 44 5 10 0 0 0 0 ( 44) THR49 0 0 0 0 4 0 0 0 0 0 ( 45) ARG50 0 0 0 0 0 0 0 3 0 0 ( 46) VAL51 0 0 0 0 2 0 0 0 0 0 ( 83) TYR88 0 0 0 94 45 0 0 0 0 0 ( 86) ARG91 0 0 0 0 1 0 0 0 0 0 (121) TYR126 0 0 0 0 10 0 0 0 0 0 (125) ALA130 0 0 0 0 1 0 0 0 0 0 (129) LEU134 0 0 0 0 1 0 0 0 0 0 (139) ASP144 0 0 0 0 1 0 0 0 0 0 (183) GLU188 0 0 0 0 6 0 0 0 0 0 (186) ILE191 0 0 0 0 9 0 0 0 0 0 (300) PHE307 0 0 0 0 3 0 0 0 0 0 (301) SER308 0 0 0 6 9 1 0 0 0 0 (302) HIS309 0 0 0 12 0 0 0 0 0 0 prot.sequence erfparefqrdlldwfarerrdlpWRkdrdpykvwvsSvmLqQtRVetvipyfeqfidrfptlealadadedevlkaweglgYysrvrnlhaavkevktryggkvpddpdefsrlkgvgpYtvgAvlsLaygvpepavDgnvmrvlsrlflvtddiakpstrkrfeqivreimayenpgafnEalIelgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqvplavavladdegrvlirkrdstgllanlwefpscetadgkekleqmvgeqyglqveltepivsfehafSHlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewa >8dwj_A:DNA_primase_core;Zinc_beta-ribbon; title=PRIMASE OF MUTANT BACTERIOPHAGE T4 PRIMOSOME WITH SINGLE STRAND DNA/RNA PRIMER HYBRID IN PRIMER EXITING STATE organism=? DNA sequence DT(T1) DC(T2) DG(T3) DG(T4) DC(T5) DT(T6) DG(T7) chainA ( 32) ARG34 0 0 3 2 0 0 0 ( 47) LYS49 1 5 0 0 0 0 0 ( 51) TRP53 0 0 0 1 11 0 0 ( 53) TYR55 0 0 0 0 0 23 0 ( 56) ASN58 0 0 0 0 0 1 1 ( 60) ASN62 0 0 0 0 0 0 3 ( 62) HIS64 0 0 0 0 0 7 3 ( 64) TYR66 0 0 0 0 12 4 0 ( 69) HIS71 0 0 0 0 0 0 11 (203) GLN205 6 0 0 0 0 0 0 (204) LYS206 0 1 0 0 0 0 0 prot.sequence sipwidnefayralahlpkftqvnnsstfklRfrcpvcgdsktdqnKargWyYgdNnegNiHcYncnyHapigiylkefepdlyreyifeirkekgksrpiekpkelpkqpekkiikslpscvrldklaedhpiikyvkarcipkdkwkylwfttewpklvnsiapgtykkeiseprlvipiynangkaesfqgralkkdapQKyitieaypeatkiygvervkdgdvyvlegpidslfiengiaitggqldlevvpfkdrrvwvldneprhpdtikrmtklvdagervmfwdkspwkskdvndmirkegatpeqimeymknniaqglmakmrlskyak >8dwm_A:DNA/RNA_polymerases; title=HOST-GUEST COMPLEX OF BLEOMYCIN A2 FULLY BOUND TO CTTAGTTATAACTAAG organism=Moloney murine leukemia virus DNA sequence DA(G10):DT(B7) DA(G11):DT(B6) DC(G12):DG(B5) DT(G13):DA(B4) DA(G14):DT(B3) DA(G15):DT(B2) DG(G16):DC(B1) chainA ( 41) TYR64 0 0 0 0 0 0 7 ( 76) LEU99 0 0 0 0 0 0 12 ( 88) ASP114 0 0 0 0 0 0 13 ( 90) ARG116 0 0 0 0 3 11 7 prot.sequence twlsdfpqawaetggmglavrqapliiplkatstpvsikqYpmsqearlgikphiqrlldqgilvpcqspwntplLpvktndyrpvqDlRevnkrvedihptvpnpynllsglppshqwytvldlkdaffclrlhptsqplfafewrdpsgqltwtrlpqgfknsptlfdealhrdladfriqhpdlillqyvddlllaatseldcqqgtrallqtlgnlgyrasakkaqicqkqvkylgyllkegqr >8dy7_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STREPTOMYCES VENEZUELAE RNAP TRANSCRIPTION OPEN PROMOTER COMPLEX WITH WHIA AND WHIB TRANSCRIPTION FACTORS organism=? DNA sequence DA(P7):DT(O94) DG(P8):DC(O93) DG(P9):DC(O92) DC(P10):DG(O91) DC(P11):DG(O90) DG(P12):DC(O89) DC(P13):DG(O88) DT(P14):DA(O87) DG(P15):DC(O86) DC(P16):DG(O85) DT(P17):DA(O84) DG(P18):DC(O83) DC(P19):DG(O82) DT(P20):DA(O81) DC(P21):DG(O80) DA(P22):DT(O79) DA(P36):DT(O72) DG(P37):DC(O64) DA(P38):DT(O63) DG(P39):DC(O62) DG(P40):DC(O61) DG(P41):DC(O60) DG(P42):DC(O59) DT(P43):DA(O58) DT(P44):DA(O57) DC(P45):DG(O56) DG(P46):DC(O55) DC(P47):DG(O54) DG(P48):DC(O53) DG(P49):DC(O52) DG(P50):DC(O51) DA(P51):DT(O50) DC(P52):DG(O49) DG(P53):DC(O48) DG(P54):DC(O47) DC(P55):DG(O46) DA(P56):DT(O45) DT(P57):DA(O44) DC(P58):DG(O43) DG(P59):DC(O42) DG(P60):DC(O41) DC(P61):DG(O40) DC(P62):DG(O39) DA(P63):DT(O38) DA(P64):DT(O37) DT(P65):DA(O36) DT(P66):DA(O35) DG(P67):DC(O34) DG(P68):DC(O33) DC(P69):DG(O32) DC(P70):DG(O31) DC(P71):DG(O30) DG(P73):DC(O28) DT(P74):DA(O27) DG(P75):DC(O26) DT(P76):DA(O25) DG(P77):DC(O24) DT(P78):DA(O23) DC(P79):DG(O22) DG(P80):DC(O21) DC(P81):DG(O20) DA(P82):DT(O19) DC(P83):DG(O18) DG(P84):DC(O17) DA(P85):DT(O16) DT(P86):DA(O15) DC(P87):DG(O14) DT(P88):DA(O13) DG(P89):DC(O12) DG(P90):DC(O11) chainC (438) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence astaplrisfakikeplevpnllalqtesfdwllgnaawkarveaalesgqdvptksgleeifeeispiedfsgsmsltfrdhrfeppknsideckdrdftygaplfvtaeftnnetgeiksqtvfmgdfplmtnkgtfvingtervvvsqlvrspgvyfdssidktsdkdifsakiipsrgawlemeidkrdlvgvridrkrkqsvtvllkalgwtteqilqefgeyesmratlekdhtqgqddalldiyrklrpgepptreaaqtllenlyfnpkrydlakvgrykvnkklgadepldagvlttddviatikylvklhagetetigengneivvetddidhfgnrrlrnvgeliqnqvrtglarmervvrermttqdveaitpqtlinirpvvasikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRagfevrdvhpshygrmcpietpegpnigligslasygrvnafgfietpyrkvvdgqvtdevdyvtadeedrfviaqanaaldeelrfsenrvlvrkrggevdyvepsdvdymdvsprqmvsvatamipflehddanralmganmmrqavplikseaplvgtgmeyrcatdagdvlkaekdgvvqelsadyitvanddgtyityrlhkfsrsnqgtsvnqkvvvdegdrviegqvladgpatedgemalgknllvafmpweghnyedaiilsqrlvqddvlssihieehevdardtklgpeeitrdipnvseevladldergiirigaevvagdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgeigkiigvrvfdreegdelppgvnqlvrvyvaqkrkitdgdklagrhgnkgviskilpiedmpfledgtpvdiilnplgvpsrmnpgqvleihlgwlasrgwdvsgladewaqrlqaigadkvapgtnvatpvfdgaredelagllnhtipnrdgermvlptgkarlfdgrsgepfpdpisvgymyilklhhlvddklharstgpysmitqqplggkaqfggqrfgemevwaleaygaayalqelltiksddvtgrvkvyeaivkgenipepgipesfkvlikemqslclnvevlssdgmsiemr >8dy7_CDFHI: title=STREPTOMYCES VENEZUELAE RNAP TRANSCRIPTION OPEN PROMOTER COMPLEX WITH WHIA AND WHIB TRANSCRIPTION FACTORS organism=? DNA sequence DA(P7):DT(O94) DG(P8):DC(O93) DG(P9):DC(O92) DC(P10):DG(O91) DC(P11):DG(O90) DG(P12):DC(O89) DC(P13):DG(O88) DT(P14):DA(O87) DG(P15):DC(O86) DC(P16):DG(O85) DT(P17):DA(O84) DG(P18):DC(O83) DC(P19):DG(O82) DT(P20):DA(O81) DC(P21):DG(O80) DA(P22):DT(O79) DA(P36):DT(O72) DG(P37):DC(O64) DA(P38):DT(O63) DG(P39):DC(O62) DG(P40):DC(O61) DG(P41):DC(O60) DG(P42):DC(O59) DT(P43):DA(O58) DT(P44):DA(O57) DC(P45):DG(O56) DG(P46):DC(O55) DC(P47):DG(O54) DG(P48):DC(O53) DG(P49):DC(O52) DG(P50):DC(O51) DA(P51):DT(O50) DC(P52):DG(O49) DG(P53):DC(O48) DG(P54):DC(O47) DC(P55):DG(O46) DA(P56):DT(O45) DT(P57):DA(O44) DC(P58):DG(O43) DG(P59):DC(O42) DG(P60):DC(O41) DC(P61):DG(O40) DC(P62):DG(O39) DA(P63):DT(O38) DA(P64):DT(O37) DT(P65):DA(O36) DT(P66):DA(O35) DG(P67):DC(O34) DG(P68):DC(O33) DC(P69):DG(O32) DC(P70):DG(O31) DC(P71):DG(O30) DG(P73):DC(O28) DT(P74):DA(O27) DG(P75):DC(O26) DT(P76):DA(O25) DG(P77):DC(O24) DT(P78):DA(O23) DC(P79):DG(O22) DG(P80):DC(O21) DC(P81):DG(O20) DA(P82):DT(O19) DC(P83):DG(O18) DG(P84):DC(O17) DA(P85):DT(O16) DT(P86):DA(O15) DC(P87):DG(O14) DT(P88):DA(O13) DG(P89):DC(O12) DG(P90):DC(O11) chainC (438) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainF ( 6) VAL219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) LYS220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) LEU223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) GLN340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (275) GLU488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (279) GLN492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 37) LYS37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI prot.sequence astaplrisfakikeplevpnllalqtesfdwllgnaawkarveaalesgqdvptksgleeifeeispiedfsgsmsltfrdhrfeppknsideckdrdftygaplfvtaeftnnetgeiksqtvfmgdfplmtnkgtfvingtervvvsqlvrspgvyfdssidktsdkdifsakiipsrgawlemeidkrdlvgvridrkrkqsvtvllkalgwtteqilqefgeyesmratlekdhtqgqddalldiyrklrpgepptreaaqtllenlyfnpkrydlakvgrykvnkklgadepldagvlttddviatikylvklhagetetigengneivvetddidhfgnrrlrnvgeliqnqvrtglarmervvrermttqdveaitpqtlinirpvvasikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRagfevrdvhpshygrmcpietpegpnigligslasygrvnafgfietpyrkvvdgqvtdevdyvtadeedrfviaqanaaldeelrfsenrvlvrkrggevdyvepsdvdymdvsprqmvsvatamipflehddanralmganmmrqavplikseaplvgtgmeyrcatdagdvlkaekdgvvqelsadyitvanddgtyityrlhkfsrsnqgtsvnqkvvvdegdrviegqvladgpatedgemalgknllvafmpweghnyedaiilsqrlvqddvlssihieehevdardtklgpeeitrdipnvseevladldergiirigaevvagdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgeigkiigvrvfdreegdelppgvnqlvrvyvaqkrkitdgdklagrhgnkgviskilpiedmpfledgtpvdiilnplgvpsrmnpgqvleihlgwlasrgwdvsgladewaqrlqaigadkvapgtnvatpvfdgaredelagllnhtipnrdgermvlptgkarlfdgrsgepfpdpisvgymyilklhhlvddklharstgpysmitqqplggkaqfggqrfgemevwaleaygaayalqelltiksddvtgrvkvyeaivkgenipepgipesfkvlikemqslclnvevlssdgmsiemr/ddvnffdelriglataddirqwshgevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekviyfaaymityvdderrtrdlpsleahvsverqqienrrdsdlearakklendlgeleaegakadvrrkvregaeremkqlrdraqreidrldevwsrfknlkvqdlegdellyrelrdrfgtyfdgsmgaaalqkrlesfdleeeaerlreiirtgkgqkktralkrlkvvsaflqtanspkgmvldcvpvippdlrpmvqldggrfatsdlndlyrrvinrnnrlkrlldlgapeiivnnekrmlqeavdalfdngrrgrpvtgpgnrplkslsdmlkgkqgrfrqnllgkrvdysarsvivvgpqlklHqcglpkamalelfkpfvmkrlvdlnhaqniksakrmvergrtvvydvleeviaehpvllnraptlhrlgiqafepqlvegkaiqihplvctafnadfdgdqmavhlplsaeaqaearilmlssnnilkpadgrpvtmptqdmvlglfflttdgelrdtkgegrafgstaeaimafdagelalqsqidirfpvgtvaprgwvppvteegepewqqgdsfrlrtslgralfnellpedypfvdysvgkkqlseivndlaerypkvivaatldnlkaagfywatrsgvtvaisdvvvpeakkaivkgyeeqdekvqkqyerglitkeertqeliaiwtkatnevaeamnanfpktnpifmmvdsgargnmmqmrqiagmrglvsnaknetiprpikasfregltvleyfisthgarkgladtalrtadsgyltrrlvdvsqdviireedcgterglklriaergadgvlrktddvetsvyarmlaedvvvdgkviapanvdlgdvlidalvgagveevktrsvltcesavgtcafcygrslatgklvdigeavgiiaaqsigepgtqltmditqglprvvelfearqpkgvapiseaagrvrieetektkkivvtpddgtdetafpiskrarllvgegdhvevgqkltvgatnphdvlrilgqravqvhlvaevqkvynsqgvsihdkhieiiirqmlrrvtiiesgdaellpgelverskfetenrrvvtegghpasgrpqlmgitkaslateswlsaasfqettrvltdaainaksdsliglkenviigklipagtglsryrnirvepteeakaam/atadpVKdyLkqigkvpllnaeqevelakrieaglfaedklansdklapklkreleiiaedgrraknhlleanlrlvvslakrytgrgmlfldliqegnlgliravekfdytkgykfstyatwwirQaitRamadqartiripvHmvevinklarvqrqmlqdlgreptpeelakeldmtpekvievqkygrepislhtplgedgdsefgdliedseavvpadavsftllqeqlhsvldtlsereagvvsmrfgltdgqpktldeigkvygvtrErirQiesktmsklrhpsrsqvlrdyl/mtelfqellvedadeelgwqeralcaqtdpesffpeKggstReakkvclacevrsecleyalqnderfgiwgglseRerrrlkkk/mtaavkdeisrlpvtrtccrkaevssilrfagglhlVsgriVieaeldtamaarrlkrdileifghsselivmapgGlrrgsrfvvrvvaggdqlarqtglvdgrgrpirglppqvvsgatcdaeaawrgaflahgsltepgrssslevtcpgpeaalalvgaarrlsiaakarevrgvdrvvvrdgdaigalltrlgahesvlaweerrmrre >8dy9_BHI: title=STREPTOMYCES VENEZUELAE RNAP UNCONSTRAINED OPEN PROMOTER COMPLEX WITH WHIA AND WHIB TRANSCRIPTION FACTORS organism=? DNA sequence DC(O11):DG(P39) DC(O12):DG(P38) DA(O13):DT(P37) DG(O14):DC(P36) DA(O15):DT(P35) DT(O16):DA(P34) DC(O17):DG(P33) DG(O18):DC(P32) DT(O19):DA(P31) DG(O20):DC(P30) DC(O21):DG(P29) DG(O22):DC(P28) DA(O23):DT(P27) DC(O24):DG(P26) DA(O25):DT(P25) DC(O26):DG(P24) DA(O27):DT(P23) DC(O28):DG(P22) DC(O29):DG(P21) DG(O30):DC(P20) DG(O31):DC(P19) DG(O32):DC(P18) DC(O33):DG(P17) DC(O34):DG(P16) DA(O35):DT(P15) DA(O36):DT(P14) DT(O38):DA(P12) DG(O39):DC(P11) DG(O40):DC(P10) DC(O41):DG(P9) DT(O42):DA(P8) DT(O43):DA(P7) DG(O44):DC(P6) DA(O45):DT(P5) DC(O46):DG(P4) DA(O47):DT(P3) DC(O48):DG(P2) chainB (259) ARG259 0 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) LYS292 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 67) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 chainI (226) ASP226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) LYS287 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) ASP288 0 0 0 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) ARG295 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ARG296 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mliaqrpslteevvdefrsrfvieplepgfgytlgnslrrtllssipgaavtsiridgvlhefttvpgvkedvtdlilnikqlvvssehdepvvmylrkqgpglvtaadiappagvevhnpdlvlatlngkgklemeltvergrgyvsavqnkqvgqeigripvdsiyspvlkvtykveatrveqrtdfdklivdvetkqamrprdamasagktlvelfglarelnidaegidmgpsptdaalaadlalpieeleltvRsynclkregihsvgelvarseadlldirnfgaKsidevkaklagmglalkdsppgfdpta/edadeelgwqeralcaqtdpesffpekggstreakkvclacevrsecleyalqnderfgiwgglseRerrrlkka/mtaavkdeisrlpvtrtccrkaevssilrfagglhlvsgrivieaeldtamaarrlkrdileifghsselivmapgglrrgsrfvvrvvaggdqlarqtglvdgrgrpirglppqvvsgatcdaeaawrgaflahgsltepgrssslevtcpgpeaalalvgaarrlsiaakarevrgvdrvvvrdgdaigalltrlgahesvlaweerrmrrevratanrlanfDdanlrrsaraavaagarvqraleilgeevpehlaaagrlrmehkqasleelgaladppltKDavagriRRllamadk >8dy9_CDF: title=STREPTOMYCES VENEZUELAE RNAP UNCONSTRAINED OPEN PROMOTER COMPLEX WITH WHIA AND WHIB TRANSCRIPTION FACTORS organism=? DNA sequence DA(R7):DT(Q43) DA(R8):DT(Q42) DG(R9):DC(Q41) DC(R10):DG(Q40) DC(R11):DG(Q39) DA(R12):DT(Q38) DA(R13):DT(Q37) DT(R14):DA(Q36) DT(R15):DA(Q35) DG(R16):DC(Q34) DG(R17):DC(Q33) DC(R18):DG(Q32) DC(R19):DG(Q31) DC(R20):DG(Q30) DG(R21):DC(Q29) DG(R22):DC(Q28) DC(R36):DG(Q22) DT(R37):DC(Q21) DG(R38):DG(Q20) DG(R39):DT(Q19) DC(R40):DG(Q18) DT(R41):DC(Q17) DG(R42):DT(Q16) DA(R43):DA(Q15) DT(R44):DG(Q14) DA(R45):DA(Q13) DT(R46):DC(Q12) DC(R47):DC(Q11) DA(R48):DG(Q10) DC(R49):DA(Q9) chainC (438) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (286) GLN287 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 6) ASP217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) VAL219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) LYS220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) LEU223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ILE226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 20) LEU231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 ( 26) GLU237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 77) ARG288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 ( 78) LEU289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 93) PHE304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (111) PHE322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (112) ASP323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (115) LYS326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (117) TYR328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (120) SER331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 (121) THR332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 11 0 1 0 0 0 0 0 0 (122) TYR333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 (124) THR335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 (126) TRP337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 (129) GLN340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 5 7 1 0 0 0 (133) ARG344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 3 10 1 0 0 (147) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (150) GLU361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence astaplrisfakikeplevpnllalqtesfdwllgnaawkarveaalesgqdvptksgleeifeeispiedfsgsmsltfrdhrfeppknsideckdrdftygaplfvtaeftnnetgeiksqtvfmgdfplmtnkgtfvingtervvvsqlvrspgvyfdssidktsdkdifsakiipsrgawlemeidkrdlvgvridrkrkqsvtvllkalgwtteqilqefgeyesmratlekdhtqgqddalldiyrklrpgepptreaaqtllenlyfnpkrydlakvgrykvnkklgadepldagvlttddviatikylvklhagetetigengneivvetddidhfgnrrlrnvgeliqnqvrtglarmervvrermttqdveaitpqtlinirpvvasikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRagfevrdvhpshygrmcpietpegpnigligslasygrvnafgfietpyrkvvdgqvtdevdyvtadeedrfviaqanaaldeelrfsenrvlvrkrggevdyvepsdvdymdvsprqmvsvatamipflehddanralmganmmrqavplikseaplvgtgmeyrcatdagdvlkaekdgvvqelsadyitvanddgtyityrlhkfsrsnqgtsvnqkvvvdegdrviegqvladgpatedgemalgknllvafmpweghnyedaiilsqrlvqddvlssihieehevdardtklgpeeitrdipnvseevladldergiirigaevvagdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgeigkiigvrvfdreegdelppgvnqlvrvyvaqkrkitdgdklagrhgnkgviskilpiedmpfledgtpvdiilnplgvpsrmnpgqvleihlgwlasrgwdvsgladewaqrlqaigadkvapgtnvatpvfdgaredelagllnhtipnrdgermvlptgkarlfdgrsgepfpdpisvgymyilklhhlvddklharstgpysmitqqplggkaqfggqrfgemevwaleaygaayalqelltiksddvtgrvkvyeaivkgenipepgipesfkvlikemqslclnvevlssdgmsiemr/ddvnffdelriglataddirqwshgevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekviyfaaymityvdderrtrdlpsleahvsverqqienrrdsdlearakklendlgeleaegakadvrrkvregaeremkqlrdraqreidrldevwsrfknlkvqdlegdellyrelrdrfgtyfdgsmgaaalqkrlesfdleeeaerlreiirtgkgQkktralkrlkvvsaflqtanspkgmvldcvpvippdlrpmvqldggrfatsdlndlyrrvinrnnrlkrlldlgapeiivnnekrmlqeavdalfdngrrgrpvtgpgnrplkslsdmlkgkqgrfrqnllgkrvdysarsvivvgpqlklhqcglpkamalelfkpfvmkrlvdlnhaqniksakrmvergrtvvydvleeviaehpvllnraptlhrlgiqafepqlvegkaiqihplvctafnadfdgdqmavhlplsaeaqaearilmlssnnilkpadgrpvtmptqdmvlglfflttdgelrdtkgegrafgstaeaimafdagelalqsqidirfpvgtvaprgwvppvteegepewqqgdsfrlrtslgralfnellpedypfvdysvgkkqlseivndlaerypkvivaatldnlkaagfywatrsgvtvaisdvvvpeakkaivkgyeeqdekvqkqyerglitkeertqeliaiwtkatnevaeamnanfpktnpifmmvdsgargnmmqmrqiagmrglvsnaknetiprpikasfregltvleyfisthgarkgladtalrtadsgyltrrlvdvsqdviireedcgterglklriaergadgvlrktddvetsvyarmlaedvvvdgkviapanvdlgdvlidalvgagveevktrsvltcesavgtcafcygrslatgklvdigeavgiiaaqsigepgtqltmditqglprvvelfearqpkgvapiseaagrvrieetektkkivvtpddgtdetafpiskrarllvgegdhvevgqkltvgatnphdvlrilgqravqvhlvaevqkvynsqgvsihdkhieiiirqmlrrvtiiesgdaellpgelverskfetenrrvvtegghpasgrpqlmgitkaslateswlsaasfqettrvltdaainaksdsliglkenviigklipagtglsryrnirvepteeakaam/agataDpVKdyLkqIgkvpLlnaeqEvelakrieaglfaedklansdklapklkreleiiaedgrraknhlleanlRLvvslakrytgrgmlFldliqegnlgliravekFDytKgYkfSTYaTwWirQaitRamadqartiripvHmvEvinklarvqrqmlqdlgreptpeelakeldmtpekvievqkygrepislhtplgedgdsefgdliedseavvpadavsftllqeqlhsvldtlsereagvvsmrfgltdgqpktldeigkvygvtrerirqiesktmsklrhpsrsqvlrdyl >8dy9_I: title=STREPTOMYCES VENEZUELAE RNAP UNCONSTRAINED OPEN PROMOTER COMPLEX WITH WHIA AND WHIB TRANSCRIPTION FACTORS organism=? DNA sequence DC(O11):DG(P39) DC(O12):DG(P38) DA(O13):DT(P37) DG(O14):DC(P36) DA(O15):DT(P35) DT(O16):DA(P34) DC(O17):DG(P33) DG(O18):DC(P32) DT(O19):DA(P31) DG(O20):DC(P30) DC(O21):DG(P29) DG(O22):DC(P28) DA(O23):DT(P27) DC(O24):DG(P26) DA(O25):DT(P25) DC(O26):DG(P24) DA(O27):DT(P23) DC(O28):DG(P22) DC(O29):DG(P21) DG(O30):DC(P20) DG(O31):DC(P19) DG(O32):DC(P18) DC(O33):DG(P17) DC(O34):DG(P16) DA(O35):DT(P15) DA(O36):DT(P14) DT(O38):DA(P12) DG(O39):DC(P11) DG(O40):DC(P10) DC(O41):DG(P9) DT(O42):DA(P8) DT(O43):DA(P7) DG(O44):DC(P6) DA(O45):DT(P5) DC(O46):DG(P4) DA(O47):DT(P3) DC(O48):DG(P2) chainI (226) ASP226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) LYS287 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) ASP288 0 0 0 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) ARG295 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ARG296 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mtaavkdeisrlpvtrtccrkaevssilrfagglhlvsgrivieaeldtamaarrlkrdileifghsselivmapgglrrgsrfvvrvvaggdqlarqtglvdgrgrpirglppqvvsgatcdaeaawrgaflahgsltepgrssslevtcpgpeaalalvgaarrlsiaakarevrgvdrvvvrdgdaigalltrlgahesvlaweerrmrrevratanrlanfDdanlrrsaraavaagarvqraleilgeevpehlaaagrlrmehkqasleelgaladppltKDavagriRRllamadk >8dzj_B: title=CRYO-EM STRUCTURE OF ACIDIBACILLUS SULFUROXIDANS CAS12F IN COMPLEX WITH SGRNA AND TARGET DNA organism=? DNA sequence DA(C12) DT(C13) DT(C14) DG(C15) DT(C16) DG(C17) DG(C18) DG(C19) DT(C20) DC(C21) DT(C22) DT(C23) DG(C24) DA(C25) DG(C26) DA(C27) DG(C28) DC(C29) DA(C30) DA(C31) DA(C32) DA(C33) DA(C34) DC(C35) DC(C36) DT(C37) DG(C38) chainB ( 3) TYR5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvYryeivkpldldwkefgtilrqlqqetrfalnkatqlawewmgfssdykilgytnvhgyayhtiktkayrlnsgnlsqtikratdrfkayqkeilrgdmsipsykrdipldlikenisvnrmnhgdyiaslsllsnpakqemnvkrkisviiivrgagktimdrilsgeyqvsasqiihddrknkwylnisydfe >8e23_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HUMAN DNA POLYMERASE THETA IN COMPLEX WITH ALLOSTERIC INHIBITOR organism=? DNA sequence DG(C4):DC(B14) DC(C5):DG(B13) DT(C6):DA(B12) DG(C7):DC(B11) DT(C8):DA(B10) DC(C9):DG(B9) DA(C10):DT(B8) DT(C11):DA(B7) DT(C12):DA(B6) DG(C13):DC(B5) DG3(A2601):DC(B4) chainA (295) LYS2181 0 0 0 0 0 0 0 1 0 0 0 (323) LYS2209 0 0 0 0 4 1 0 0 0 0 0 (355) ARG2241 0 0 0 0 0 0 0 0 2 12 0 (365) ASN2251 0 0 0 0 0 0 5 9 3 0 0 (395) ASP2330 0 0 0 0 0 0 0 0 0 0 1 (398) GLN2333 0 0 0 0 0 0 0 0 0 0 6 (424) PHE2359 0 0 0 0 0 0 0 0 0 0 6 (444) ARG2379 0 0 0 0 0 0 0 0 0 0 7 (448) LYS2383 0 0 0 0 0 0 0 0 0 0 12 (449) GLN2384 0 0 0 0 0 0 0 0 0 0 8 (452) TYR2387 0 0 0 0 0 0 0 0 0 0 20 (456) TYR2391 0 0 0 0 0 0 0 0 0 0 9 (458) MET2393 0 0 0 0 0 0 0 0 0 0 4 (535) ASN2470 0 0 0 0 0 0 0 0 0 1 1 (539) GLN2474 0 0 0 0 0 0 0 0 0 3 0 (587) ASP2540 0 0 0 0 0 0 0 0 0 0 6 prot.sequence slsiidvasdqnlfqtfikewrckkrfsislacekirsltssktgfpikgcddtlvvglavcwggrdayyfslqkesldpsltlkdrmwylqsclrkekecsvviydfiqsykilllscgisleqsyedpkvacwlldpdsqeptlhsivtsflphelpllegmetsqgiqslglnagsehsgryrasvesilifnsmnqlnsllqkenlqdvfrkvempsqyclallelngigfstaecesqkhimqakldaietqayqlaghsfsftssddiaevlflelklppnreqfstsKdvlnklkalhplpglilewrritnaitKvvfplqrekclnpflgmeriypvsqshtatgRitftepNiqNvprdfeikmfsismrhafvpfpggsilaadysqlelrilahlshdrrliqvlntgadvfrsiaaewkmiepesvgddlrqqakQicygiiYgMgakslgeqmgikendaacyidsfksrytginqfmtetvknckrdgfvqtilgrrrylpgikdnnpyrkahaerqaiNtivQgsaadivkiatvniqkqletfhstfkshghregmcpirggffilqlhdellyevaeedvvqvaqivknemesavklsvklkvkvkigaswgelkdfdv >8e24_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=HUMAN DNA POLYMERASE THETA IN COMPLEX WITH ALLOSTERIC INHIBITOR organism=Homo sapiens DNA sequence DC(B4):DG3(A2601) DC(B5):DG(C13) DA(B6):DT(C12) DA(B7):DT(C11) DT(B8):DA(C10) DG(B9):DC(C9) DA(B10):DT(C8) DC(B11):DG(C7) DA(B12):DT(C6) DG(B13):DC(C5) DC(B14):DG(C4) chainA (320) LYS2209 0 0 0 0 2 3 0 0 0 0 0 (352) ARG2241 1 11 2 0 0 0 0 0 0 0 0 (362) ASN2251 0 0 3 7 4 0 0 0 0 0 0 (401) ASP2330 1 0 0 0 0 0 0 0 0 0 0 (404) GLN2333 7 0 0 0 0 0 0 0 0 0 0 (430) PHE2359 5 0 0 0 0 0 0 0 0 0 0 (450) ARG2379 9 0 0 0 0 0 0 0 0 0 0 (454) LYS2383 14 0 0 0 0 0 0 0 0 0 0 (455) GLN2384 7 0 0 0 0 0 0 0 0 0 0 (458) TYR2387 28 0 0 0 0 0 0 0 0 0 0 (462) TYR2391 10 0 0 0 0 0 0 0 0 0 0 (464) MET2393 4 0 0 0 0 0 0 0 0 0 0 (541) ASN2470 1 1 0 0 0 0 0 0 0 0 0 (545) GLN2474 0 4 0 0 0 0 0 0 0 0 0 (595) ASP2540 6 0 0 0 0 0 0 0 0 0 0 prot.sequence eslsiidvasdqnlfqtfikewrckkrfsislacekirsltssktgfpikgcddtlvvglavcwggrdayyfslqkesldpsltlkdrmwylqsclrkesdkecsvviydfiqsykilllscgisleqsyedpkvacwlldpdsqeptlhsivtsflphelpllegmetsqgiqslglnagsehsgryrasvesilifnsmnqlnsllqkenlqdvfrkvempsqyclallelngigfstaecesqkhimqakldaietqayqlaghsfsftssddiaevlflelklppntskdvlnklkahplpglilewrritnaitKvvfplqrekclnpflgmeriypvsqshtatgRitftepNiqNvprdfeikmptladrgmpfsismrhafvpfpggsilaadysqlelrilahlshdrrliqvlntgadvfrsiaaewkmiepesvgddlrqqakQicYgiiYgMgakslgeqmgikendaacyidsfksrytginqfmtetvknckrdgfvqtilgrrrylpgikdnnpyrkahaerqaiNtivQgsaadivkiatvniqkqletfhstfkshghregmlfcpirggffilqlHdellyevaeedvvqvaqivknemesavklsvklkvkvkigaswgelkdfd >8e2l_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF LATES CALCARIFER TWINKLE HELICASE WITH ATP AND DNA organism=? DNA sequence DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) DT(M17) chainC (361) TYR412 0 0 0 0 0 0 2 1 0 0 0 0 chainA (360) TYR412 0 0 0 0 0 0 0 0 0 0 2 1 chainB (361) TYR412 0 0 0 0 0 0 0 0 2 0 0 0 chainD (361) TYR412 0 0 0 0 2 1 0 0 0 0 0 0 chainE (167) TYR412 0 0 5 3 0 0 0 0 0 0 0 0 chainF (156) TYR412 5 4 0 0 0 0 0 0 0 0 0 0 prot.sequence pedeaqliktmfqitkvsnatlkkfgvrlfkptkslvfpwfagpdsslkglkllsaqntdtekvtyneatvpkissyynlfgltlvgrmdsevvltgheldtlavsqatglpsvalprgvsclppmllpyleqfkrvtlwlghdirsweaskifsrklglrrcslvrpgedrpcplealargknlsriiktsipaahksivsfkqlredvygellnteqvagvkwtrfpelnrilkghrkgeltvftgptgsgkttfisevaldlciqgvntlwgsfqinnvrlakimltqfamqrleenleqydfwadkfeelplyfmtfhgqqniktvldtmqhavylydinhviidnlqfmmgqdkYavqdhiigafrkfatntschvtliihprkeeddrelqtasifgsakasqeadnvlilqekklvtcpgrrslqvtknrfdgdvgifpldfikssltfsapi/pedeaqliktmfqitkvsnatlkkfgvrlfkptkslvfpwfagpdsslkglkllsaqntdtekvtyneatvpkissyynlfgltlvgrmdsevvltgheldtlavsqatglpsvalprgvsclppmllpyleqfkrvtlwlghdirsweaskifsrklglrrcslvrpgedrpcplealargknlsriiktsipaahksivsfkqlredvygellnteqvagvkwtrfpelnrilkghrkgeltvftgptgsgkttfisevaldlciqgvntlwgsfqinnvrlakimltqfamqrleenleqydfwadkfeelplyfmtfhgqqniktvldtmqhavylydinhviidnlqfmmgqidkYavqdhiigafrkfatntschvtliihprkeeddrelqtasifgsakasqeadnvlilqekklvtcpgrrslqvtknrfdgdvgifpldfikssltfsapi/pedeaqliktmfqitkvsnatlkkfgvrlfkptkslvfpwfagpdsslkglkllsaqntdtekvtyneatvpkissyynlfgltlvgrmdsevvltgheldtlavsqatglpsvalprgvsclppmllpyleqfkrvtlwlghdirsweaskifsrklglrrcslvrpgedrpcplealargknlsriiktsipaahksivsfkqlredvygellnteqvagvkwtrfpelnrilkghrkgeltvftgptgsgkttfisevaldlciqgvntlwgsfqinnvrlakimltqfamqrleenleqydfwadkfeelplyfmtfhgqqniktvldtmqhavylydinhviidnlqfmmgqidkYavqdhiigafrkfatntschvtliihprkeeddrelqtasifgsakasqeadnvlilqekklvtcpgrrslqvtknrfdgdvgifpldfikssltfsapi/pedeaqliktmfqitkvsnatlkkfgvrlfkptkslvfpwfagpdsslkglkllsaqntdtekvtyneatvpkissyynlfgltlvgrmdsevvltgheldtlavsqatglpsvalprgvsclppmllpyleqfkrvtlwlghdirsweaskifsrklglrrcslvrpgedrpcplealargknlsriiktsipaahksivsfkqlredvygellnteqvagvkwtrfpelnrilkghrkgeltvftgptgsgkttfisevaldlciqgvntlwgsfqinnvrlakimltqfamqrleenleqydfwadkfeelplyfmtfhgqqniktvldtmqhavylydinhviidnlqfmmgqidkYavqdhiigafrkfatntschvtliihprkeeddrelqtasifgsakasqeadnvlilqekklvtcpgrrslqvtknrfdgdvgifpldfikssltfsapi/aahksivsfkqlredvygellnteqvagvkwtrfpelnrilkghrkgeltvftgptgsgkttfisevaldlciqgvntlwgsfqinnvrlakimltqfamqrleenleqydfwadkfeelplyfmtfhgqqniktvldtmqhavylydinhviidnlqfmmgqidkYavqdhiigafrkfatntschvtliihprkeeddrelqtasifgsakasqeadnvlilqekklvtcpgrrslqvtknrfdgdvgifpldfikssltfsapi/hksivsfkqlredvyggvkwtrfpelnrilkghrkgeltvftgptgsgkttfisevaldlciqgvntlwgsfqinnvrlakimltqfamqrleenleqydfwadkfeelplyfmtfhgqqniktvldtmqhavylydinhviidnlqfmmgqidkYavqdhiigafrkfatntschvtliihprkeeddrelqtasifgsakasqeadnvlilqekklvtcpgrrslqvtknrfdgdvgifpldfikssltfsapi >8e2l_F:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF LATES CALCARIFER TWINKLE HELICASE WITH ATP AND DNA organism=? DNA sequence DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) DT(M17) chainF (156) TYR412 5 4 0 0 0 0 0 0 0 0 0 0 prot.sequence hksivsfkqlredvyggvkwtrfpelnrilkghrkgeltvftgptgsgkttfisevaldlciqgvntlwgsfqinnvrlakimltqfamqrleenleqydfwadkfeelplyfmtfhgqqniktvldtmqhavylydinhviidnlqfmmgqidkYavqdhiigafrkfatntschvtliihprkeeddrelqtasifgsakasqeadnvlilqekklvtcpgrrslqvtknrfdgdvgifpldfikssltfsapi >8e3d_A:beta-beta-alpha_zinc_fingers; title=ZBTB7A ZINC FINGER DOMAIN BOUND TO DNA DUPLEX CONTAINING CAST SEQUENCE (#11) organism=Homo sapiens DNA sequence DA(X1):DT(Y22) DT(X2):DA(Y21) DT(X3):DA(Y20) DT(X4):DA(Y19) DG(X5):DC(Y18) DG(X6):DC(Y17) DG(X7):DC(Y16) DG(X8):DC(Y15) DA(X9):DT(Y14) DG(X10):DC(Y13) DG(X11):DC(Y12) DG(X12):DC(Y11) DG(X13):DC(Y10) DT(X14):DA(Y9) DC(X15):DG(Y8) DT(X16):DA(Y7) DT(X17):DA(Y6) DT(X18):DA(Y5) DA(X19):DA(Y4) DA(X20):DT(Y3) DC(X21):DG(Y2) DC(X22):DG(Y1) chainA ( 16) LYS396 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 7 0 0 0 0 0 0 ( 19) ARG399 0 0 0 0 0 0 0 0 0 0 0 8 11 2 0 0 0 0 0 0 0 0 ( 41) ARG421 0 0 0 0 0 0 0 0 0 0 4 11 2 0 0 0 0 0 0 0 0 0 ( 43) ASP423 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 ( 44) LYS424 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 ( 97) ARG477 0 0 0 0 0 17 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) SER478 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASP479 0 0 0 0 0 0 2 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) HIS480 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ARG483 0 0 0 10 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fqkcpicekviqgagKlpRhirthtgekpyecnickvrftRqDKlkvhmrkhtgekpylcqqcgaafahnydlknhmrvhtglrpyqcdsccktfvRSDHlhRhlkkdgcn >8e3e_A:beta-beta-alpha_zinc_fingers; title=ZBTB7A ZINC FINGER DOMAIN BOUND TO DNA DUPLEX CONTAINING CAST SEQUENCE (#10) organism=Homo sapiens DNA sequence DT(X2):DA(Y21) DT(X3):DA(Y20) DT(X4):DA(Y19) DG(X5):DC(Y18) DG(X6):DC(Y17) DG(X7):DC(Y16) DG(X8):DC(Y15) DA(X9):DT(Y14) DG(X10):DC(Y13) DG(X11):DC(Y12) DG(X12):DC(Y11) DG(X13):DC(Y10) DT(X14):DA(Y9) DC(X15):DG(Y8) DT(X16):DA(Y7) DT(X17):DA(Y6) DT(X18):DA(Y5) DT(X19):DA(Y4) DA(X20):DT(Y3) DC(X21):DG(Y2) chainA ( 16) LYS396 0 0 0 0 0 0 0 0 0 0 0 0 9 7 2 0 0 0 0 0 ( 19) ARG399 0 0 0 0 0 0 0 0 0 0 10 10 1 0 0 0 0 0 0 0 ( 41) ARG421 0 0 0 0 0 0 0 0 0 4 13 1 0 0 0 0 0 0 0 0 ( 43) ASP423 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 ( 44) LYS424 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 ( 97) ARG477 0 0 0 0 17 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) SER478 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASP479 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 (100) HIS480 0 0 0 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ARG483 0 0 10 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fqkcpicekviqgagKlpRhirthtgekpyecnickvrftRqDKlkvhmrkhtgekpylcqqcgaafahnydlknhmrvhtglrpyqcdsccktfvRSDHlhRhlkkdgcn >8e3f_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI RHO-DEPENDENT TRANSCRIPTION PRE-TERMINATION COMPLEX CONTAINING 18 NT LONG RNA SPACER, MG-ADP-BEF3, AND NUSG; TEC PART organism=? DNA sequence DA(586):DT(638) DC(587):DG(637) DC(588):DG(636) DG(589):DC(635) DT(590):DA(634) DC(591):DG(633) DA(592):DT(632) DT(593):DA(631) DG(594):DC(630) DA(595):DT(629) DT(596):DA(628) DC(597):DG(627) DA(598):DT(626) DT(599):DA(625) DA(5100):DT(624) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 9 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >8e3f_ABF: title=ESCHERICHIA COLI RHO-DEPENDENT TRANSCRIPTION PRE-TERMINATION COMPLEX CONTAINING 18 NT LONG RNA SPACER, MG-ADP-BEF3, AND NUSG; TEC PART organism=? DNA sequence DA(586):DT(638) DC(587):DG(637) DC(588):DG(636) DG(589):DC(635) DT(590):DA(634) DC(591):DG(633) DA(592):DT(632) DT(593):DA(631) DG(594):DC(630) DA(595):DT(629) DT(596):DA(628) DC(597):DG(627) DA(598):DT(626) DT(599):DA(625) DA(5100):DT(624) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 9 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 chainB ( 31) TYR46 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 chainF ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek >8e3k_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAGCGGAAGTGGG) organism=Homo sapiens DNA sequence DC(D18):DG(C16) DC(D19):DG(C15) DC(D20):DG(C14) DA(D21):DT(C13) DC(D22):DG(C12) DT(D23):DA(C11) DT(D24):DA(C10) DC(D25):DG(C9) DC(D26):DG(C8) DG(D27):DC(C7) DC(D28):DG(C6) DT(D29):DA(C5) DT(D30):DA(C4) DA(D31):DT(C3) chainF ( 58) GLN226 0 0 0 0 0 0 0 0 4 3 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 0 9 16 16 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 0 0 0 0 8 12 0 0 0 0 ( 66) ASN234 0 0 0 0 2 1 0 0 0 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8e3r_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAAAGGAAGTGGG) organism=Homo sapiens DNA sequence DC(D18):DG(C16) DC(D19):DG(C15) DC(D20):DG(C14) DA(D21):DT(C13) DC(D22):DG(C12) DT(D23):DA(C11) DT(D24):DA(C10) DC(D25):DG(C9) DC(D26):DG(C8) DT(D27):DA(C7) DT(D28):DA(C6) DT(D29):DA(C5) DT(D30):DA(C4) DA(D31):DT(C3) chainF ( 58) GLN226 0 0 0 0 0 0 0 0 1 3 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 0 9 15 14 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 0 0 0 0 8 12 0 0 0 0 ( 66) ASN234 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8e4h_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAGAGGAAGTGGG) organism=Homo sapiens DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DG(C6):DC(D28) DA(C7):DT(D27) DG(C8):DC(D26) DG(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DG(C12):DC(D22) DT(C13):DA(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLN226 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 16 16 9 1 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) ARG233 0 0 0 0 11 8 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 1 1 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8e5d_A: title=CRYSTAL STRUCTURE OF DOUBLE-STRANDED DNA DEAMINASE TOXIN DDDA IN COMPLEX WITH DNA WITH THE TARGET CYTOSINE PARKED IN THE MAJOR GROOVE organism=Burkholderia cenocepacia DNA sequence DG(C1):DC(B14) DT(C2):DA(B13) DA(C3):DT(B12) DC(C4):DG(B11) DC(C5):DG(B10) DG(C6):DC(B9) DG(C7):DC(B8) DA(C8):DT(B7) DC(C9):DG(B6) DG(C10):DC(B5) DT(C11):DA(B4) DT(C12):DA(B3) DG(C13):DC(B2) DC(C14):DG(B1) chainA ( 52) ALA1341 0 0 0 0 0 0 3 7 0 0 0 0 0 0 ( 56) HIS1345 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 86) PHE1375 0 0 0 0 0 0 0 10 31 0 0 0 0 0 ( 89) ASN1378 0 0 0 0 0 0 0 0 7 6 0 0 0 0 ( 90) MET1379 0 0 0 0 0 0 0 3 7 0 0 0 0 0 (114) ARG1403 0 0 0 0 0 0 0 0 0 5 6 0 0 0 prot.sequence gsyalgpyqisapqlpayngqtvgtfyyvndaggleskvfssggptpypnyAnagHvagqsalfmrdngiseglvfhnnpegtcgFcvNMtetllpenakmtvvppegaipvkRgatgetkvftgnsnspksphhh >8e5e_A: title=CRYSTAL STRUCTURE OF DOUBLE-STRANDED DNA DEAMINASE TOXIN DDDA IN COMPLEX WITH DNA WITH THE TARGET CYTOSINE FLIPPED INTO THE ACTIVE SITE organism=Burkholderia cenocepacia DNA sequence DG(B1):DC(C14) DC(B2):DG(C13) DA(B3):DT(C12) DA(B4):DT(C11) DC(B5):DG(C10) DG(B6):DC(C9) DT(B7):DA(C8) DC(B8):DG(C7) DC(B9):DG(C6) DG(B10):DC(C5) DG(B11):DC(C4) DT(B12):DA(C3) DA(B13):DT(C2) DC(B14):DG(C1) chainA ( 22) THR1311 0 0 0 0 0 0 0 10 0 0 0 0 0 0 ( 42) SER1331 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 52) ALA1341 0 0 0 0 0 0 5 2 0 0 0 0 0 0 ( 56) HIS1345 0 0 0 0 0 0 5 34 0 0 0 0 0 0 ( 57) VAL1346 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 83) THR1372 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 84) CYS1373 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 86) PHE1375 0 0 0 0 0 27 6 0 0 0 0 0 0 0 ( 87) CYS1376 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 89) ASN1378 0 0 0 0 7 7 0 0 0 0 0 0 0 0 ( 90) MET1379 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (114) ARG1403 0 0 3 5 2 0 0 0 0 0 0 0 0 0 prot.sequence gsyalgpyqisapqlpayngqTvgtfyyvndaggleskvfsSggptpypnyAnagHVagqsalfmrdngiseglvfhnnpegTCgFCvNMtetllpenakmtvvppegaipvkRgatgetkvftgnsnspksph >8e5k_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI RHO-DEPENDENT TRANSCRIPTION PRE-TERMINATION COMPLEX CONTAINING 21 NT LONG RNA SPACER, MG-ADP-BEF3, AND NUSG; TEC PART organism=? DNA sequence DA(586):DT(638) DC(587):DG(637) DC(588):DG(636) DG(589):DC(635) DT(590):DA(634) DC(591):DG(633) DA(592):DT(632) DT(593):DA(631) DG(594):DC(630) DA(595):DT(629) DT(596):DA(628) DC(597):DG(627) DA(598):DT(626) DT(599):DA(625) DA(5100):DT(624) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 9 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >8e5k_ABF: title=ESCHERICHIA COLI RHO-DEPENDENT TRANSCRIPTION PRE-TERMINATION COMPLEX CONTAINING 21 NT LONG RNA SPACER, MG-ADP-BEF3, AND NUSG; TEC PART organism=? DNA sequence DA(586):DT(638) DC(587):DG(637) DC(588):DG(636) DG(589):DC(635) DT(590):DA(634) DC(591):DG(633) DA(592):DT(632) DT(593):DA(631) DG(594):DC(630) DA(595):DT(629) DT(596):DA(628) DC(597):DG(627) DA(598):DT(626) DT(599):DA(625) DA(5100):DT(624) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 9 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 chainB ( 31) TYR46 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 chainF ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek >8e5o_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI RHO-DEPENDENT TRANSCRIPTION PRE-TERMINATION COMPLEX CONTAINING 24 NT LONG RNA SPACER, MG-ADP-BEF3, AND NUSG; TEC PART organism=? DNA sequence DA(586):DT(638) DC(587):DG(637) DC(588):DG(636) DG(589):DC(635) DT(590):DA(634) DC(591):DG(633) DA(592):DT(632) DT(593):DA(631) DG(594):DC(630) DA(595):DT(629) DT(596):DA(628) DC(597):DG(627) DA(598):DT(626) DT(599):DA(625) DA(5100):DT(624) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 9 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >8e5o_ABF: title=ESCHERICHIA COLI RHO-DEPENDENT TRANSCRIPTION PRE-TERMINATION COMPLEX CONTAINING 24 NT LONG RNA SPACER, MG-ADP-BEF3, AND NUSG; TEC PART organism=? DNA sequence DA(586):DT(638) DC(587):DG(637) DC(588):DG(636) DG(589):DC(635) DT(590):DA(634) DC(591):DG(633) DA(592):DT(632) DT(593):DA(631) DG(594):DC(630) DA(595):DT(629) DT(596):DA(628) DC(597):DG(627) DA(598):DT(626) DT(599):DA(625) DA(5100):DT(624) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 9 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 chainB ( 31) TYR46 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) THR317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 chainF ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinYrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaiTgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteekffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek >8e5y_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN BOUND TO D(AATAAGCGGAAGTGGG) ACETATE FREE AT PH 5.4 organism=Homo sapiens DNA sequence DC(D18):DG(C16) DC(D19):DG(C15) DC(D20):DG(C14) DA(D21):DT(C13) DC(D22):DG(C12) DT(D23):DA(C11) DT(D24):DA(C10) DC(D25):DG(C9) DC(D26):DG(C8) DG(D27):DC(C7) DC(D28):DG(C6) DT(D29):DA(C5) DT(D30):DA(C4) DA(D31):DT(C3) chainF ( 58) GLN226 0 0 0 0 0 0 0 0 4 3 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 0 9 16 15 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 0 0 0 0 8 11 0 0 0 0 ( 66) ASN234 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8e66_F:"Winged_helix"_DNA-binding_domain; title=ETV6 H396Y VARIANT BOUND TO DNA CONTAINING THE SEQUENCE GGAA organism=Mus musculus DNA sequence DC(E2):DG(D15) DT(E3):DA(D14) DC(E4):DG(D13) DA(E5):DT(D12) DC(E6):DG(D11) DT(E7):DA(D10) DT(E8):DA(D9) DC(E9):DG(D8) DC(E10):DG(D7) DG(E11):DC(D6) DG(E12):DC(D5) DC(E13):DG(D4) DT(E14):DA(D3) DT(E15):DA(D2) chainF ( 56) LYS389 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 59) ARG392 0 0 0 0 0 1 11 15 17 0 0 0 0 0 ( 60) ALA393 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 62) ARG395 0 0 0 0 0 0 0 0 13 16 0 0 0 0 ( 63) TYR396 0 0 0 1 9 0 0 0 0 0 0 0 0 0 prot.sequence srllwdyvyqllsdsryenfirwedkeskifrivdpnglarlwgnhknrtnmtyeKmsRAlRYyyklniirkepgqrllfrfmktpdeimsg >8e67_A:"Winged_helix"_DNA-binding_domain; title=ETV6 H396Y VARIANT BOUND TO DNA CONTAINING THE SEQUENCE GGAT organism=Mus musculus DNA sequence DA(B2):DT(C15) DA(B3):DT(C14) DG(B4):DC(C13) DC(B5):DG(C12) DC(B6):DG(C11) DG(B7):DC(C10) DG(B8):DC(C9) DA(B9):DT(C8) DT(B10):DA(C7) DG(B11):DC(C6) DT(B12):DA(C5) DG(B13):DC(C4) DA(B14):DT(C3) DG(B15):DC(C2) chainA ( 58) GLU388 0 0 0 2 2 1 0 0 0 0 0 0 0 0 ( 59) LYS389 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 62) ARG392 0 0 0 0 0 27 19 9 0 0 0 0 0 0 ( 65) ARG395 0 0 0 0 16 12 0 0 0 0 0 0 0 0 ( 66) TYR396 0 0 0 0 0 0 0 4 5 6 0 0 0 0 prot.sequence iadsrllwdyvyqllsdsryenfirwedkeskifrivdpnglarlwgnhknrtnmtyEKmsRalRYyyklniirkepgqrllfrfmktpdeim >8e6x_ABF: title=ESCHERICHIA COLI RHO-DEPENDENT TRANSCRIPTION PRE-TERMINATION COMPLEX CONTAINING 18 NT LONG RNA SPACER, LAMBDA-TR1 RUT RNA, MG-ADP-BEF3, AND NUSG; TEC PART organism=? DNA sequence DA(586):DT(638) DC(587):DG(637) DC(588):DG(636) DG(589):DC(635) DT(590):DA(634) DC(591):DG(633) DA(592):DT(632) DT(593):DA(631) DG(594):DC(630) DA(595):DT(629) DT(596):DA(628) DC(597):DG(627) DA(598):DT(626) DT(599):DA(625) DA(5100):DT(624) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 9 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 chainB (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 chainF ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrRvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek >8e6x_F:N-utilization_substance_G_protein_NusG,_N-terminal_domain;Translation_proteins_SH3-like_domain; title=ESCHERICHIA COLI RHO-DEPENDENT TRANSCRIPTION PRE-TERMINATION COMPLEX CONTAINING 18 NT LONG RNA SPACER, LAMBDA-TR1 RUT RNA, MG-ADP-BEF3, AND NUSG; TEC PART organism=? DNA sequence DG(66):DG(5122) DT(67):DG(5121) DC(68):DG(5120) DT(69):DA(5119) DG(610):DC(5118) DG(611):DA(5117) DC(612):DG(5116) DG(613):DA(5115) DT(614):DC(5114) DC(615):DC(5113) DC(616):DG(5112) DT(617):DC(5111) DC(618):DA(5110) DT(619):DT(5109) DC(620):DT(5108) DA(621):DA(5103) DC(622):DT(5102) DC(623):DT(5101) DT(624):DA(5100) DA(625):DT(599) DT(626):DA(598) DG(627):DC(597) DA(628):DT(596) DT(629):DA(595) DC(630):DG(594) DA(631):DT(593) DT(632):DA(592) DG(633):DC(591) DA(634):DT(590) DC(635):DG(589) DG(636):DC(588) DG(637):DC(587) DT(638):DA(586) chainF ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek >8e6z_ABF: title=ESCHERICHIA COLI RHO-DEPENDENT TRANSCRIPTION PRE-TERMINATION COMPLEX CONTAINING 18 NT LONG RNA SPACER, DC75 RUT MIMIC RNA, MG-ADP-BEF3, AND NUSG; TEC PART organism=? DNA sequence DG(66):DG(5122) DT(67):DG(5121) DC(68):DG(5120) DT(69):DA(5119) DG(610):DC(5118) DG(611):DA(5117) DC(612):DG(5116) DG(613):DA(5115) DT(614):DC(5114) DC(615):DC(5113) DC(616):DG(5112) DT(617):DC(5111) DC(618):DA(5110) DT(619):DT(5109) DC(620):DT(5108) DA(621):DA(5103) DC(622):DT(5102) DC(623):DT(5101) DT(624):DA(5100) DA(625):DT(599) DT(626):DA(598) DG(627):DC(597) DA(628):DT(596) DT(629):DA(595) DC(630):DG(594) DA(631):DT(593) DT(632):DA(592) DG(633):DC(591) DA(634):DT(590) DC(635):DG(589) DG(636):DC(588) DG(637):DC(587) DT(638):DA(586) chainA (149) HIS150 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 9 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 10) PHE15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlHRspgvffdsdkgkthssgkvlynaRiipyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyrRvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr/kkrwyvvqaFsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqqvgdkprpktlfepgemvrvndgpfadfngvveevdyeksrlkvsvsifgratpveldfsqvek >8e6z_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=ESCHERICHIA COLI RHO-DEPENDENT TRANSCRIPTION PRE-TERMINATION COMPLEX CONTAINING 18 NT LONG RNA SPACER, DC75 RUT MIMIC RNA, MG-ADP-BEF3, AND NUSG; TEC PART organism=? DNA sequence DA(586):DT(638) DC(587):DG(637) DC(588):DG(636) DG(589):DC(635) DT(590):DA(634) DC(591):DG(633) DA(592):DT(632) DT(593):DA(631) DG(594):DC(630) DA(595):DT(629) DT(596):DA(628) DC(597):DG(627) DA(598):DT(626) DT(599):DA(625) DA(5100):DT(624) DT(5101):DT(619) DT(5102):DC(618) DA(5103):DT(617) DT(5108):DC(616) DT(5109):DC(615) DA(5110):DT(614) DC(5111):DG(613) DG(5112):DC(612) DC(5113):DG(611) DC(5114):DG(610) DA(5115):DT(69) DG(5116):DC(68) DA(5117):DT(67) DC(5118):DG(66) DA(5119):DT(65) DG(5120):DC(64) DG(5121):DC(63) DG(5122):DC(62) chainB (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (1132) LYS1170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrRvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8e70_abcdef: title=ESCHERICHIA COLI RHO-DEPENDENT TRANSCRIPTION PRE-TERMINATION COMPLEX CONTAINING 18 NT LONG RNA SPACER, DC75 RUT MIMIC RNA, MG-ADP-BEF3, AND NUSG; RHO HEXAMER PART organism=? DNA sequence DC(81) DC(82) DC(83) DC(84) DC(85) DC(86) DC(87) DC(88) DC(89) DC(810) DC(811) DC(812) DC(813) DC(814) DC(815) DT(816) DC(817) DC(818) DC(819) DC(820) DC(821) DC(822) DC(823) DC(824) DC(825) DC(826) DC(827) DC(828) DC(829) DC(830) DC(831) DT(832) DC(833) DC(834) DC(835) DC(836) DC(837) DC(838) DC(839) DC(840) DC(841) DC(842) DC(843) DC(844) DC(845) DC(846) DC(847) DT(848) DC(849) DC(850) DC(851) DC(852) DC(853) DC(854) DC(855) DC(856) DC(857) DC(858) DC(859) DC(860) DC(861) chaine ( 24) GLU24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 28) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 ( 62) PHE62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 64) PHE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 ( 76) PRO76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 80) TYR80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 37 1 0 0 0 0 0 ( 82) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 ( 83) PRO83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 84) SER84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 85) GLN85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 ( 88) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 25 0 0 0 0 0 0 0 0 0 ( 89) PHE89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (102) ARG102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (108) GLU108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 (110) TYR110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 22 0 0 0 0 (112) ALA112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (113) LEU113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (114) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainf ( 62) PHE62 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PHE64 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR80 0 0 0 11 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) SER82 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) SER84 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN85 0 26 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG88 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) PHE89 37 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG102 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLU108 0 0 0 4 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) TYR110 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) ALA112 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) LEU113 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) LEU114 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) LYS115 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) VAL116 17 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) VAL119 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) PRO124 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ARG128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 chainc ( 62) PHE62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PHE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) PRO83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) SER84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) PHE89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLU108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) TYR110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainb ( 62) PHE62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PHE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) PHE89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLU108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) TYR110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) ALA112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) LYS115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) VAL116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaina ( 62) PHE62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PHE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR80 0 0 0 0 0 0 0 0 0 0 0 0 0 8 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) SER82 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) SER84 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN85 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG88 0 0 0 0 0 0 0 0 0 0 40 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) PHE89 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) ARG102 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLU108 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) TYR110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) ALA112 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaind ( 62) PHE62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PHE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 80) TYR80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 20 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) PRO83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) SER84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) GLN85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ARG87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) PHE89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) GLU108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) TYR110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) ALA112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (115) LYS115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnltelkntpvselitlgenmglenlarmrkqdiifailkqhaksgedifgdgvleilqdgFgFlrsadssylagpddiYvSpSQirRFnlrtgdtisgkiRppkegERYfAlLkvnevnfdkpenarnkilfenltplhansrlrmergngstedltarvldlaspigrgqrglivappkagktmllqniaqsiaynhpdcvlmvlliderpeevtemqrlvkgevvastfdepasrhvqvaemviekakrlvehkkdviilldsitrlarayntvvpasgkvltggvdanalhrpkrffgaarnveeggsltiiatalidtgskmdeviyeefkgtgnmelhlsrkiaekrvfpaidynrsgtrkeellttqeelqkmwilrkiihpmgeidameflinklamtktnddffemmk/mnltelkntpvselitlgenmglenlarmrkqdiifailkqhaksgedifgdgvleilqdgFgFlrsadssylagpddiYvSpsQirRFnlrtgdtisgkiRppkegERYfAlLKVnevnfdkpenarnkilfenltplhansrlrmergngstedltarvldlaspigrgqrglivappkagktmllqniaqsiaynhpdcvlmvlliderpeevtemqrlvkgevvastfdepasrhvqvaemviekakrlvehkkdviilldsitrlarayntvvpasgkvltggvdanalhrpkrffgaarnveeggsltiiatalidtgskmdeviyeefkgtgnmelhlsrkiaekrvfpaidynrsgtrkeellttqeelqkmwilrkiihpmgeidameflinklamtktnddffemmk/mnltelkntpvselitlgenmglenlarmrkqdiifailkqhaksgedifgdgvleilqdgFgFlrsadssylagpddiYvSPSQiRRFnlrtgdtisgkirppkegERYfallkvnevnfdkpenarnkilfenltplhansrlrmergngstedltarvldlaspigrgqrglivappkagktmllqniaqsiaynhpdcvlmvlliderpeevtemqrlvkgevvastfdepasrhvqvaemviekakrlvehkkdviilldsitrlarayntvvpasgkvltggvdanalhrpkrffgaarnveeggsltiiatalidtgskmdeviyeefkgtgnmelhlsrkiaekrvfpaidynrsgtrkeellttqeelqkmwilrkiihpmgeidameflinklamtktnddffemmk/mnltelkntpvselitlgenmglenlarmrkqdiifailkqhaksgedifgdgvleilqdgFgFlrsadssylagpddiYvSPSQiRRFnlrtgdtisgkirppkegERYfAllKvnevnfdkpenarnkilfenltplhansrlrmergngstedltarvldlaspigrgqrglivappkagktmllqniaqsiaynhpdcvlmvlliderpeevtemqrlvkgevvastfdepasrhvqvaemviekakrlvehkkdviilldsitrlarayntvvpasgkvltggvdanalhrpkrffgaarnveeggsltiiatalidtgskmdeviyeefkgtgnmelhlsrkiaekrvfpaidynrsgtrkeellttqeelqkmwilrkiihpmgeidameflinklamtktnddffemmk/mnltelkntpvselitlgenmglEnlaRmrkqdiifailkqhaksgedifgdgvleilqdgFgFlrsadssylagPddiYvSPSQirRFnlrtgdtisgkiRppkegERYfALLkvnevnfdkpenarnkilfenltplhansrlrmergngstedltarvldlaspigrgqrglivappkagktmllqniaqsiaynhpdcvlmvlliderpeevtemqrlvkgevvastfdepasrhvqvaemviekakrlvehkkdviilldsitrlarayntvvpasgkvltggvdanalhrpkrffgaarnveeggsltiiatalidtgskmdeviyeefkgtgnmelhlsrkiaekrvfpaidynrsgtrkeellttqeelqkmwilrkiihpmgeidameflinklamtktnddffemmk/mnltelkntpvselitlgenmglenlarmrkqdiifailkqhaksgedifgdgvleilqdgFgFlrsadssylagpddiYvSpSQirRFnlrtgdtisgkiRppkegERYfALLKVneVnfdkPenaRnkilfenltplhansrlrmergngstedltarvldlaspigrgqrglivappkagktmllqniaqsiaynhpdcvlmvlliderpeevtemqrlvkgevvastfdepasrhvqvaemviekakrlvehkkdviilldsitrlarayntvvpasgkvltggvdanalhrpkrffgaarnveeggsltiiatalidtgskmdeviyeefkgtgnmelhlsrkiaekrvfpaidynrsgtrkeellttqeelqkmwilrkiihpmgeidameflinklamtktnddffemmk >8e70_e:P-loop_containing_nucleoside_triphosphate_hydrolases;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like; title=ESCHERICHIA COLI RHO-DEPENDENT TRANSCRIPTION PRE-TERMINATION COMPLEX CONTAINING 18 NT LONG RNA SPACER, DC75 RUT MIMIC RNA, MG-ADP-BEF3, AND NUSG; RHO HEXAMER PART organism=? DNA sequence DC(81) DC(82) DC(83) DC(84) DC(85) DC(86) DC(87) DC(88) DC(89) DC(810) DC(811) DC(812) DC(813) DC(814) DC(815) DT(816) DC(817) DC(818) DC(819) DC(820) DC(821) DC(822) DC(823) DC(824) DC(825) DC(826) DC(827) DC(828) DC(829) DC(830) DC(831) DT(832) DC(833) DC(834) DC(835) DC(836) DC(837) DC(838) DC(839) DC(840) DC(841) DC(842) DC(843) DC(844) DC(845) DC(846) DC(847) DT(848) DC(849) DC(850) DC(851) DC(852) DC(853) DC(854) DC(855) DC(856) DC(857) DC(858) DC(859) DC(860) DC(861) chaine ( 24) GLU24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 28) ARG28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 ( 62) PHE62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 ( 64) PHE64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 ( 76) PRO76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 80) TYR80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 37 1 0 0 0 0 0 ( 82) SER82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 ( 83) PRO83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 84) SER84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 85) GLN85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 ( 88) ARG88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 25 0 0 0 0 0 0 0 0 0 ( 89) PHE89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (102) ARG102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (108) GLU108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 (109) ARG109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 (110) TYR110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 22 0 0 0 0 (112) ALA112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (113) LEU113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (114) LEU114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mnltelkntpvselitlgenmglEnlaRmrkqdiifailkqhaksgedifgdgvleilqdgFgFlrsadssylagPddiYvSPSQirRFnlrtgdtisgkiRppkegERYfALLkvnevnfdkpenarnkilfenltplhansrlrmergngstedltarvldlaspigrgqrglivappkagktmllqniaqsiaynhpdcvlmvlliderpeevtemqrlvkgevvastfdepasrhvqvaemviekakrlvehkkdviilldsitrlarayntvvpasgkvltggvdanalhrpkrffgaarnveeggsltiiatalidtgskmdeviyeefkgtgnmelhlsrkiaekrvfpaidynrsgtrkeellttqeelqkmwilrkiihpmgeidameflinklamtktnddffemmk >8e74_CDZ: title=MYCOBACTERIUM TUBERCULOSIS RNAP PAUSED ELONGATION COMPLEX WITH NUSG TRANSCRIPTION FACTOR organism=? DNA sequence DG(P110):DC(O45) DA(P111):DT(O44) DG(P112):DC(O43) DG(P113):DC(O42) DA(P114):DT(O41) DT(P115):DA(O40) DA(P116):DT(O39) DA(P117):DT(O38) DA(P118):DT(O37) DA(P119):DT(O36) DT(P120):DA(O35) DA(P121):DT(O34) DC(P122):DG(O33) DT(P123):DA(O32) DA(P124):DT(O31) DT(P125):DA(O30) DA(P126):DT(O29) DT(P127):DA(O28) DC(P128):DT(O27) DC(P129):DT(O26) DT(P130):DG(O25) DG(P131):DT(O24) DG(P132):DT(O23) DT(P133):DT(O22) DT(P134):DA(O21) DA(P135):DT(O20) DA(P136):DT(O19) DA(P137):DT(O18) DG(P138):DC(O17) DG(P139):DC(O16) DG(P140):DC(O15) DT(P141):DA(O14) DT(P142):DA(O13) DT(P143):DA(O12) DT(P144):DA(O11) DC(P145):DG(O10) DT(P146):DA(O9) chainZ ( 23) TYR55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) LEU115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ASP117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) TRP120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 16 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ASN125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (107) PRO139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (152) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) GLU213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (289) GLN287 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) THR392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (396) PRO394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (504) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (869) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (870) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvkvipsrgaWlEfdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmeRvvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpggLsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevls/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvTgPgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrtditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/dpaaalkaelrskpgdwyvvhsYagyenkvkanletrvqnldvgdyifqvevpteevteikngqrkqvnrkvlpgyilvrmdLtDdsWaavRNtpgvtgfvgatsrPsalalddvvkfllpr >8e74_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS RNAP PAUSED ELONGATION COMPLEX WITH NUSG TRANSCRIPTION FACTOR organism=? DNA sequence DG(P110):DC(O45) DA(P111):DT(O44) DG(P112):DC(O43) DG(P113):DC(O42) DA(P114):DT(O41) DT(P115):DA(O40) DA(P116):DT(O39) DA(P117):DT(O38) DA(P118):DT(O37) DA(P119):DT(O36) DT(P120):DA(O35) DA(P121):DT(O34) DC(P122):DG(O33) DT(P123):DA(O32) DA(P124):DT(O31) DT(P125):DA(O30) DA(P126):DT(O29) DT(P127):DA(O28) DC(P128):DT(O27) DC(P129):DT(O26) DT(P130):DG(O25) DG(P131):DT(O24) DG(P132):DT(O23) DT(P133):DT(O22) DT(P134):DA(O21) DA(P135):DT(O20) DA(P136):DT(O19) DA(P137):DT(O18) DG(P138):DC(O17) DG(P139):DC(O16) DG(P140):DC(O15) DT(P141):DA(O14) DT(P142):DA(O13) DT(P143):DA(O12) DT(P144):DA(O11) DC(P145):DG(O10) DT(P146):DA(O9) chainD (289) GLN287 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) THR392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (396) PRO394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (504) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (869) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (870) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvTgPgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrtditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa >8e79_CDN: title=MYCOBACTERIUM TUBERCULOSIS RNAP PAUSED ELONGATION COMPLEX WITH ESCHERICHIA COLI NUSG TRANSCRIPTION FACTOR organism=? DNA sequence DG(P110):DC(O45) DA(P111):DT(O44) DG(P112):DC(O43) DG(P113):DC(O42) DA(P114):DT(O41) DT(P115):DA(O40) DA(P116):DT(O39) DA(P117):DT(O38) DA(P118):DT(O37) DA(P119):DT(O36) DT(P120):DA(O35) DA(P121):DT(O34) DC(P122):DG(O33) DT(P123):DA(O32) DA(P124):DT(O31) DT(P125):DA(O30) DA(P126):DT(O29) DT(P127):DA(O28) DC(P128):DT(O27) DC(P129):DT(O26) DT(P130):DG(O25) DG(P131):DT(O24) DA(P135):DT(O20) DA(P136):DT(O19) DA(P137):DT(O18) DG(P138):DC(O17) DG(P139):DC(O16) DG(P140):DC(O15) DT(P141):DA(O14) DT(P142):DA(O13) DT(P143):DA(O12) DT(P144):DA(O11) DC(P145):DG(O10) DT(P146):DA(O9) chainC (152) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (348) ARG346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (504) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (870) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekRydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnRrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpggLsreRaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgrevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevls/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrRvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrtAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/kkrwyvvqafsgfegrvatslrehiklhnmedlfgevmvpteevveirggqrrkserkffpgyvlvqmvmndaswhlvrsvprvmgfiggtsdrpapisdkevdaimnrlqq >8e82_CDZ: title=MYCOBACTERIUM TUBERCULOSIS RNAP ELONGATION COMPLEX WITH NUSG TRANSCRIPTION FACTOR organism=? DNA sequence DG(Q13):DC(P134) DC(Q14):DC(P133) DG(Q15):DT(P132) DG(Q16):DC(P131) DG(Q17):DT(P130) DC(Q18):DC(P129) DT(Q19):DC(P128) DA(Q20):DA(P127) DT(Q29):DT(P126) DG(Q30):DC(P125) DG(Q31):DC(P124) DC(Q32):DG(P123) DG(Q33):DC(P122) DG(Q34):DC(P121) DC(Q35):DG(P120) DG(Q36):DC(P119) DA(Q37):DT(P118) DA(Q38):DT(P117) DT(Q39):DA(P116) DA(Q40):DT(P115) DC(Q41):DG(P114) DC(Q42):DG(P113) DC(Q43):DG(P112) DT(Q44):DA(P111) DC(Q45):DG(P110) chainC (156) ARG181 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) TRP211 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (202) ASP227 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ARG228 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ILE370 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (346) ASP371 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (351) ARG376 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) LEU463 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) ARG467 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) GLU471 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (447) VAL472 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (348) ARG346 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) ARG427 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) ALA501 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (504) PRO502 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (869) THR867 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (870) ALA868 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainZ prot.sequence sssnnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvriDRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddIDhfgnRrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpggLsreRaglEVrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgrevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevls/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrRvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/dpaaalkaelrskpgdwyvvhsyagyenkvkanletrvqnldvgdyifqvevpteevteikngqrkqvnrkvlpgyilvrmdltddswaavrntpgvtgfvgatsrpsalalddvvkfllpr >8e82_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS RNAP ELONGATION COMPLEX WITH NUSG TRANSCRIPTION FACTOR organism=? DNA sequence DG(Q13):DC(P134) DC(Q14):DC(P133) DG(Q15):DT(P132) DG(Q16):DC(P131) DG(Q17):DT(P130) DC(Q18):DC(P129) DT(Q19):DC(P128) DA(Q20):DA(P127) DT(Q29):DT(P126) DG(Q30):DC(P125) DG(Q31):DC(P124) DC(Q32):DG(P123) DG(Q33):DC(P122) DG(Q34):DC(P121) DC(Q35):DG(P120) DG(Q36):DC(P119) DA(Q37):DT(P118) DA(Q38):DT(P117) DT(Q39):DA(P116) DA(Q40):DT(P115) DC(Q41):DG(P114) DC(Q42):DG(P113) DC(Q43):DG(P112) DT(Q44):DA(P111) DC(Q45):DG(P110) chainD (348) ARG346 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) ARG427 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) ALA501 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (504) PRO502 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (869) THR867 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (870) ALA868 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrRvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa >8e85_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RG-ENDED PRIMER-DGMPNPP TERNARY MISMATCH COMPLEX WITH MN2+ organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DC(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 4 0 0 0 0 0 0 0 0 ( 45) TRP42 0 57 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 0 4 0 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 0 1 0 0 0 0 0 0 (321) PRO326 0 12 0 0 0 0 0 0 0 0 0 0 (323) LYS328 0 7 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRsmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfPgKTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e86_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RC-ENDED PRIMER-DGMPNPP TERNARY MISMATCH COMPLEX WITH MN2+ organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DG(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 3 0 0 0 0 0 0 0 0 ( 45) TRP42 0 57 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 0 4 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 0 1 0 0 0 0 0 0 (321) PRO326 0 13 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e87_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RA-ENDED PRIMER-DGMPNPP TERNARY MISMATCH COMPLEX WITH MG2+ organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DT(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 4 0 0 0 0 0 0 0 0 ( 45) TRP42 0 55 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 0 3 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 1 1 0 0 0 0 0 0 (319) ASN324 0 0 0 0 1 0 0 0 0 0 0 0 (321) PRO326 0 14 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e88_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RU-ENDED PRIMER-DGMPNPP TERNARY MISMATCH COMPLEX WITH MG2+ organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DA(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 4 0 0 0 0 0 0 0 0 ( 45) TRP42 0 62 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 0 6 0 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 0 2 0 0 0 0 0 0 (321) PRO326 0 12 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRsmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e89_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RU-ENDED PRIMER-BINARY COMPLEX organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DA(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 5 0 0 0 0 0 0 0 0 ( 45) TRP42 0 63 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 4 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 0 6 0 0 0 0 0 0 0 0 ( 65) SER62 0 0 0 2 0 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 0 1 0 0 0 0 0 0 (321) PRO326 0 12 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 1 0 0 0 0 0 0 0 0 0 0 (377) ARG382 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRSmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e8a_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-DT-ENDED PRIMER BINARY COMPLEX organism=Homo sapiens DNA sequence DA(P2):DT(T13) DG(P3):DC(T12) DC(P4):DG(T11) DG(P5):DC(T10) DT(P6):DA(T9) DC(P7):DG(T8) DA(P8):DT(T7) DT(P9):DA(T6) chainA ( 64) ARG61 0 0 0 0 0 0 0 18 (317) SER322 0 0 0 0 0 0 1 0 (377) ARG382 0 0 13 10 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslRrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e8b_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RU-ENDED PRIMER TERNARY MISMATCH COMPLEX:GROUND STATE AT PH7.0 (K+ MES) WITH 1 CA2+ ION organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DA(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 2 0 0 0 0 0 0 0 0 ( 45) TRP42 0 61 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 0 2 0 0 0 0 0 0 (321) PRO326 0 13 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtrsmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e8c_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RU-ENDED PRIMER TERNARY MISMATCH COMPLEX:REACTION WITH 10 MM MN2+ FOR 30S organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DA(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 3 0 0 0 0 0 0 0 0 ( 45) TRP42 0 63 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 0 4 1 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 0 2 0 0 0 0 0 0 (321) PRO326 0 9 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRsmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e8d_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RU-ENDED PRIMER TERNARY MISMATCH COMPLEX:REACTION WITH 10 MM MN2+ FOR 60S organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DA(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 4 0 0 0 0 0 0 0 0 ( 45) TRP42 0 60 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 0 4 0 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 0 2 0 0 0 0 0 0 (321) PRO326 0 9 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRsmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e8e_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RU-ENDED PRIMER TERNARY MISMATCH COMPLEX:REACTION WITH 10 MM MN2+ FOR 90S organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DA(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 1 0 0 0 0 0 0 0 0 ( 45) TRP42 0 62 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 0 3 1 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 0 2 0 0 0 0 0 0 (321) PRO326 0 9 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRsmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e8f_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RU-ENDED PRIMER TERNARY MISMATCH COMPLEX:REACTION WITH 10 MM MN2+ FOR 120S organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DA(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 1 0 0 0 0 0 0 0 0 ( 45) TRP42 0 60 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 65) SER62 0 0 0 1 0 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 0 1 0 0 0 0 0 0 (319) ASN324 0 0 0 1 0 0 0 0 0 0 0 0 (321) PRO326 0 9 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtrSmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSkNfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e8g_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RU-ENDED PRIMER TERNARY MISMATCH COMPLEX:REACTION WITH 10 MM MN2+ FOR 180S organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DA(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 5 0 0 0 0 0 0 0 0 ( 45) TRP42 0 61 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 0 5 0 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 0 2 0 0 0 0 0 0 (321) PRO326 0 9 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRsmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e8h_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RU-ENDED PRIMER TERNARY MISMATCH COMPLEX:REACTION WITH 10 MM MN2+ FOR 300S organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DA(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 3 0 0 0 0 0 0 0 0 ( 45) TRP42 0 59 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 65) SER62 0 0 0 2 0 0 0 0 0 0 0 0 ( 67) TRP64 0 1 0 0 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 0 2 0 0 0 0 0 0 (321) PRO326 0 9 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtrSmWaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e8j_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RG-ENDED PRIMER-DGMPNPP TERNARY MISMATCH COMPLEX WITH MG2+ organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DC(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 4 0 0 0 0 0 0 0 0 ( 45) TRP42 0 55 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 0 4 0 0 0 0 0 0 0 0 (321) PRO326 0 7 0 0 0 0 0 0 0 0 0 0 (323) LYS328 0 5 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfPgKTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e8k_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA-DNA-RC-ENDED PRIMER-DGMPNPP TERNARY MISMATCH COMPLEX WITH MG2+ organism=Homo sapiens DNA sequence DC(T2) DA(T3) DT(T4) DT(T5) DG(T6) DT(T7) DG(T8) DA(T9) DC(T10) DG(T11) DC(T12) DT(T13) chainA ( 41) GLN38 0 0 0 3 0 0 0 0 0 0 0 0 ( 45) TRP42 0 57 0 0 0 0 0 0 0 0 0 0 ( 51) ILE48 0 0 0 1 0 0 0 0 0 0 0 0 ( 64) ARG61 0 0 0 3 0 0 0 0 0 0 0 0 (317) SER322 0 0 0 0 0 1 0 0 0 0 0 0 (321) PRO326 0 13 0 0 0 0 0 0 0 0 0 0 (324) THR329 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gphmatgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQyksWkgggiIavsyearafgvtRsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfPgkTalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrlsslrrccaltrydahkmshdaftvikncntsgtewsppltmlflcatkfsas >8e8m_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS RNAP PAUSED ELONGATION COMPLEX organism=? DNA sequence DA(O13):DA(P136) DA(O14):DA(P135) DC(O15):DT(P134) DC(O16):DT(P133) DC(O17):DG(P132) DT(O18):DG(P131) DT(O19):DT(P130) DT(O20):DC(P129) DT(O27):DC(P128) DA(O28):DT(P127) DT(O29):DA(P126) DA(O30):DT(P125) DT(O31):DA(P124) DA(O32):DT(P123) DG(O33):DC(P122) DT(O34):DA(P121) DA(O35):DT(P120) DT(O36):DA(P119) DT(O37):DA(P118) DT(O38):DA(P117) DT(O39):DA(P116) DA(O40):DT(P115) DT(O41):DA(P114) DC(O42):DG(P113) DC(O43):DG(P112) DT(O44):DA(P111) DC(O45):DG(P110) chainC (152) ARG181 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) LYS203 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) ARG208 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP211 0 0 0 0 0 0 0 0 12 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ILE370 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG376 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) VAL472 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvKvipsRgaWlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddIdhfgnRrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRagleVrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevls >8e8m_CD: title=MYCOBACTERIUM TUBERCULOSIS RNAP PAUSED ELONGATION COMPLEX organism=? DNA sequence DG(P110):DC(O45) DA(P111):DT(O44) DG(P112):DC(O43) DG(P113):DC(O42) DA(P114):DT(O41) DT(P115):DA(O40) DA(P116):DT(O39) DA(P117):DT(O38) DA(P118):DT(O37) DA(P119):DT(O36) DT(P120):DA(O35) DA(P121):DT(O34) DC(P122):DG(O33) DT(P123):DA(O32) DA(P124):DT(O31) DT(P125):DA(O30) DA(P126):DT(O29) DT(P127):DA(O28) DC(P128):DT(O27) DC(P129):DT(O20) DT(P130):DT(O19) DG(P131):DT(O18) DG(P132):DC(O17) DT(P133):DC(O16) DT(P134):DC(O15) DA(P135):DA(O14) DA(P136):DA(O13) chainC (152) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (174) LYS203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (179) ARG208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 12 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 (341) ILE370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (347) ARG376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 (443) VAL472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 chainD (289) GLN287 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (396) PRO394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (504) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (869) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (870) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvKvipsRgaWlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddIdhfgnRrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsreRagleVrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevls/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgPgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa >8e95_CD: title=MYCOBACTERIUM TUBERCULOSIS RNAP ELONGATION COMPLEX organism=? DNA sequence DG(P110):DC(Q45) DA(P111):DT(Q44) DG(P112):DC(Q43) DG(P113):DC(Q42) DG(P114):DC(Q41) DT(P115):DA(Q40) DA(P116):DT(Q39) DT(P117):DA(Q38) DT(P118):DA(Q37) DC(P119):DG(Q36) DG(P120):DC(Q35) DC(P121):DG(Q34) DC(P122):DG(Q33) DG(P123):DC(Q32) DC(P124):DG(Q31) DC(P125):DG(Q30) DT(P126):DT(Q29) DA(P127):DA(Q20) DC(P128):DT(Q19) DC(P129):DC(Q18) DT(P130):DG(Q17) DC(P131):DG(Q16) DT(P132):DG(Q15) DC(P133):DC(Q14) DC(P134):DG(Q13) chainC (156) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 (186) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 (202) ASP227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 (203) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (345) ILE370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (346) ASP371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (351) ARG376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (438) LEU463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 (442) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 0 (447) VAL472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 chainD (332) LEU330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (503) ALA501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (504) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 (869) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 prot.sequence sssnnsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvriDRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddIDhfgnRrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpggLsreRagleVrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgrevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevls/gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLdggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa >8e95_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS RNAP ELONGATION COMPLEX organism=? DNA sequence DG(Q13):DC(P134) DC(Q14):DC(P133) DG(Q15):DT(P132) DG(Q16):DC(P131) DG(Q17):DT(P130) DC(Q18):DC(P129) DT(Q19):DC(P128) DA(Q20):DA(P127) DT(Q29):DT(P126) DG(Q30):DC(P125) DG(Q31):DC(P124) DC(Q32):DG(P123) DG(Q33):DC(P122) DG(Q34):DC(P121) DC(Q35):DG(P120) DG(Q36):DC(P119) DA(Q37):DT(P118) DA(Q38):DT(P117) DT(Q39):DA(P116) DA(Q40):DT(P115) DC(Q41):DG(P114) DC(Q42):DG(P113) DC(Q43):DG(P112) DT(Q44):DA(P111) DC(Q45):DG(P110) chainD (332) LEU330 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (503) ALA501 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (504) PRO502 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (869) THR867 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gamldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLdggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgrpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTadsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa >8e9a_A:Nucleotidyltransferase; title=CRYSTAL STRUCTURE OF ASFVPOLX IN COMPLEX WITH 10-23 DNAZYME AND MG organism=African swine fever virus BA71V DNA sequence DG(C1):DC(C52) DC(C2):DG(C51) DT(C3):DA(C50) DG(C4):DC(C49) DG(C5):DC(C48) DG(C6):DC(C47) DA(C7):DT(C46) DT(C8):DA(C45) DA(C44) DG(C43) DC(C42) DA(C41) DA(C40) DC(C39) DA(C38) DT(C37) DC(C36) DG(C35) DA(C34) DT(C33) DC(C32) DG(C31) DG(C30) DC(C10):DG(C29) DA(C11):DT(C28) DT(C12):DA(C27) DT(C13):DA(C26) DG(C14):DC(C25) DT(C15):DA(C24) DG(C16):DC(C23) DC(C17) DG(C22) chainA ( 86) LYS85 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) HIS115 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) VAL120 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) LEU123 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ILE124 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) ARG127 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence smltliqgkkivnhlrsrlafeyngqlikilsknivavgslrreekmlndvdlliivpekkllkhvlpnirikglsfsvkvcgerKcvlfiewekktyqldlftalaeekpyaifHftgpVsyLIriRaalkkknyklnqyglfknqtlvplkittekelikelgftyripkkrl >8ea3_DW: title=V-K CAST TRANSPOSOSOME FROM SCYTONEMA HOFMANNI, MAJOR CONFIGURATION organism=? DNA sequence DA(11):DT(386) DC(12):DA(385) DC(13):DG(384) DG(14):DC(383) DA(15):DA(382) DC(16):DT(381) DG(17):DC(380) DA(18):DT(379) DC(19):DA(378) DA(110):DC(377) DG(111):DA(376) DA(112):DT(375) DT(113):DG(374) DA(114):DT(373) DA(115):DC(372) DT(116):DA(371) DT(117):DC(370) DT(118):DT(369) DG(119):DG(368) DT(120):DA(367) DC(121):DT(366) DA(122):DT(365) DC(123):DA(364) DT(124):DA(363) DG(125):DT(362) DT(126):DA(361) DA(127):DT(360) DC(128):DA(357) DA(129):DG(356) DG(130):DC(355) DT(131):DA(354) DA(132):DA(353) DG(133):DC(352) DA(134):DA(351) DA(135):DT(350) DT(136):DA(349) DA(137):DT(348) DT(138):DA(347) DA(139):DT(346) DG(140):DC(345) DA(141):DT(344) DT(142):DA(343) DG(143):DC(342) DC(144):DG(341) DG(145):DC(340) DC(146):DG(339) DA(147):DT(338) DT(148):DA(337) DC(149):DG(336) DT(150):DA(335) DA(151):DT(334) DT(152):DA(333) DA(153):DT(332) DT(154):DA(331) DA(155):DT(330) DG(156):DC(329) DA(157):DT(328) DT(158):DA(327) DG(159):DC(326) DC(160):DG(325) DA(161):DT(324) DA(162):DT(323) DA(163):DT(322) DT(164):DA(321) DT(165):DA(320) DG(166):DC(319) DA(167):DT(318) DG(168):DC(317) DT(169):DA(316) DG(170):DC(315) DG(171):DC(314) DC(172):DG(313) DC(173):DG(312) DT(174):DA(311) DT(175):DA(310) DA(176):DT(39) DT(177):DT(38) DT(178):DG(37) DA(179):DG(36) DA(180):DT(35) DA(181):DC(34) DT(182):DA(33) DG(183):DG(32) DA(184):DT(31) chainD chainW ( 49) ARG77 0 0 0 0 2 26 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (124) ASN152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) LYS154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ARG158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) ARG174 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (262) LYS290 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) PRO314 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) SER315 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) GLU321 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) ARG322 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) LYS325 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) VAL343 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) ARG346 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) GLU351 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ewlqaeiarlkgksivplqqvktlhdwldgkrkarkscrvvgesrtgktvacdayryrhkpqqeagrpptvpvvyirphqkcgpkdlfkkiteylkyrvtkgtvsdfrdrtievlkgcgvemliideadrlkpetfadvrdiaedlgiavvlvgtdrldavikrdeqvlerfrahlrfgklsgedfkntvemweqmvlklpvssnlkskemlriltsategyigrldeilreaairslsrglkkidkavlqevakey/leknviatqlseeaqvkleviqsllepcdrttygqklreaaeklnvslRtvqrlvknweqdglvgltqtsRadkgkhRigefwenfitktykegnkgskrmtpkqvalrveakarelkdskppNyKtvlRvlapilekqqkaksiRspgwrgttlsvktregkdlsvdysnhvwqcdhtrvdvllvdqhgeilsrpwlttvidtysrcimginlgfdapssgvvalalrhailpkrygseyklhcewgtygkpehfytdggKdfrsnhlsqigaqlgfvchlrdrPSeggvvERpfKtlndqlfstlpgytgsnVqeRpedaEkdarltlreleqllvryivdrynqsidarmgdqtrferweaglptvpvpiperdldiclmkqsrrtvqrggclqfqnlmyrgeylagyagetvnlrfdprdittilvyrqennqevfltrahaqgleteqlaldeaeaasrrlrtagktisnqsllqevvdrdalvatkksrkerqkleqtvlrsaavdes >8ea4_Y:mu_transposase,_C-terminal_domain;Ribonuclease_H-like; title=V-K CAST TRANSPOSOSOME FROM SCYTONEMA HOFMANNI, MINOR CONFIGURATION organism=? DNA sequence DA(4-28):DT(528) DC(4-27):DG(527) DA(4-26):DT(526) DA(4-25):DT(525) DC(4-24):DG(524) DG(4-23):DC(523) DA(4-22):DT(522) DC(4-21):DG(521) DA(4-20):DT(520) DT(4-19):DA(519) DA(4-18):DT(518) DT(4-17):DA(517) DA(4-16):DT(516) DA(4-15):DT(515) DT(4-14):DA(514) DT(4-13):DA(513) DA(4-12):DT(512) DG(4-11):DC(511) DT(4-10):DA(510) DC(4-9):DG(59) DA(4-8):DT(58) DC(4-7):DG(57) DT(4-6):DA(56) DG(4-5):DC(55) DT(4-4):DA(54) DA(4-3):DT(53) DC(4-2):DG(52) chainY (201) GLN425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (271) ARG495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence dysnhvwqcdhtrvdvllvdqhgeilsrpwlttvidtysrcimginlgfdapssgvvalalrhailpkrygseyklhcewgtygkpehfytdgnhlsqigaqlgfvchlrpfktlndqlfstlpgytgdarltlreleqllvryivdrynqsidarmgdqtrferweaglptvpvpiperdldiclmkqsrrtvqrggclQfqnlmyrgeylagyagetvnlrfdprdittilvyrqennqevfltrahaqgleteqlaldeaeaasrrlRtagktisnqsllqevvdrdalvatkksrkerqk >8eae_A: title=STRUCTURE OF TERNARY COMPLEX OF CGAS WITH DSDNA AND BOUND 5- PPPG(2,5)PI organism=? DNA sequence DA(E1):DT(F18) DT(E2):DA(F17) DC(E3):DG(F16) DT(E4):DA(F15) DG(E5):DC(F14) DT(E6):DA(F13) DA(E7):DT(F12) DC(E8):DG(F11) DA(E9):DT(F10) DT(E10):DA(F9) DG(E11):DC(F8) DT(E12):DA(F7) DA(E13):DT(F6) DC(E14):DG(F5) DA(E15):DT(F4) DG(E16):DC(F3) DA(E17):DT(F2) DT(E18):DA(F1) chainA ( 14) ARG161 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 11 0 0 prot.sequence dklkkvldklrlkRkdiseaaetvnkvverllrrmqkresefkgveqlntgsyyehvkisapnefdvmfklevprielqeyyetgafylvkfkrinplshflegevlsatkmlskfrkiikeevkeikdidvsvekekpgspavtllirnpeeisvdiilaleskgswpistkeglpiqgwlgtkvrtnlrrepfylvpknakdgnsfqgetwrlsfshtekyilnnhgiektccessgakccrkeclklmkylleqlkkefqeldafcsyhvktaifhmwtqdpqdsqwdprnlsscfdkllaffleclrtekldhyfipkfnlfsqelidrkskeflskkieyernngfpifdk >8eaf_A:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=SSOMCM HEXAMER BOUND TO MG/ADP-BEFX AND 12-MER OLIGO-DT. CLASS 1 organism=? DNA sequence DT(X1) DT(X2) DT(X3) DT(X4) DT(X5) DT(X6) DT(X7) DT(X8) DT(X9) DT(X10) DT(X11) chainA (364) ARG379 20 0 0 0 0 0 0 0 0 0 0 prot.sequence qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeyyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm >8eaf_ABCDEF:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=SSOMCM HEXAMER BOUND TO MG/ADP-BEFX AND 12-MER OLIGO-DT. CLASS 1 organism=? DNA sequence DT(X1) DT(X2) DT(X3) DT(X4) DT(X5) DT(X6) DT(X7) DT(X8) DT(X9) DT(X10) DT(X11) chainA (364) ARG379 20 0 0 0 0 0 0 0 0 0 0 chainB (364) ARG379 1 7 3 0 0 0 0 0 0 0 0 (371) TYR386 1 2 0 0 0 0 0 0 0 0 0 chainC (364) ARG379 0 0 0 3 1 0 0 0 0 0 0 (371) TYR386 0 0 0 1 0 0 0 0 0 0 0 chainD chainE chainF prot.sequence qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeyyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm >8eah_ABCDEF:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=SSOMCM HEXAMER BOUND TO MG/ADP-BEFX AND 16-MER OLIGO-DT. CLASS 1 organism=? DNA sequence DT(X1) DT(X2) DT(X3) DT(X4) DT(X5) DT(X6) DT(X7) DT(X8) DT(X9) DT(X10) DT(X11) chainA (364) ARG379 20 0 0 0 0 0 0 0 0 0 0 chainB (364) ARG379 1 7 3 0 0 0 0 0 0 0 0 (371) TYR386 1 2 0 0 0 0 0 0 0 0 0 chainC (364) ARG379 0 0 0 3 1 0 0 0 0 0 0 (371) TYR386 0 0 0 1 0 0 0 0 0 0 0 chainD chainE chainF prot.sequence qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeyyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm >8eah_C:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=SSOMCM HEXAMER BOUND TO MG/ADP-BEFX AND 16-MER OLIGO-DT. CLASS 1 organism=? DNA sequence DT(X1) DT(X2) DT(X3) DT(X4) DT(X5) DT(X6) DT(X7) DT(X8) DT(X9) DT(X10) DT(X11) chainC (364) ARG379 0 0 0 3 1 0 0 0 0 0 0 (371) TYR386 0 0 0 1 0 0 0 0 0 0 0 prot.sequence qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm >8eaj_ABCDEF:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=SSOMCM HEXAMER BOUND TO MG/ADP-BEFX AND 46-MER DNA STRAND. CLASS 1 organism=? DNA sequence DT(X1) DT(X2) DT(X3) DT(X4) DT(X5) DT(X6) DT(X7) DT(X8) DT(X9) DT(X10) DT(X11) chainA (364) ARG379 17 0 0 0 0 0 0 0 0 0 0 chainB (364) ARG379 0 7 9 0 0 0 0 0 0 0 0 (371) TYR386 1 3 0 0 0 0 0 0 0 0 0 chainC (364) ARG379 0 0 0 6 2 0 0 0 0 0 0 (371) TYR386 0 0 0 2 0 0 0 0 0 0 0 chainD (364) ARG379 0 0 0 0 0 1 0 0 0 0 0 chainE chainF (366) LYS381 1 0 0 0 0 0 0 0 0 0 0 prot.sequence qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeyyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeyyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeyyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvreKgtgeyyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm >8eaj_B:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=SSOMCM HEXAMER BOUND TO MG/ADP-BEFX AND 46-MER DNA STRAND. CLASS 1 organism=? DNA sequence DT(X1) DT(X2) DT(X3) DT(X4) DT(X5) DT(X6) DT(X7) DT(X8) DT(X9) DT(X10) DT(X11) chainB (364) ARG379 0 7 9 0 0 0 0 0 0 0 0 (371) TYR386 1 3 0 0 0 0 0 0 0 0 0 prot.sequence qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm >8eal_ABCDEF:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=SSOMCM HEXAMER BOUND TO MG/ADP-BEFX AND DNA. CLASS 1. MERGED PARTICLES FROM DATASETS WITH 3 DIFFERENT DNA ENTITIES organism=? DNA sequence DT(X1) DT(X2) DT(X3) DT(X4) DT(X5) DT(X6) DT(X7) DT(X8) DT(X9) DT(X10) DT(X11) chainA (364) ARG379 17 0 0 0 0 0 0 0 0 0 0 chainB (364) ARG379 1 7 3 0 0 0 0 0 0 0 0 (371) TYR386 1 2 0 0 0 0 0 0 0 0 0 chainC (364) ARG379 0 0 0 3 1 0 0 0 0 0 0 (371) TYR386 0 0 0 1 0 0 0 0 0 0 0 chainD chainE chainF prot.sequence qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeyyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm/qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm >8eal_C:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=SSOMCM HEXAMER BOUND TO MG/ADP-BEFX AND DNA. CLASS 1. MERGED PARTICLES FROM DATASETS WITH 3 DIFFERENT DNA ENTITIES organism=? DNA sequence DT(X1) DT(X2) DT(X3) DT(X4) DT(X5) DT(X6) DT(X7) DT(X8) DT(X9) DT(X10) DT(X11) chainC (364) ARG379 0 0 0 3 1 0 0 0 0 0 0 (371) TYR386 0 0 0 1 0 0 0 0 0 0 0 prot.sequence qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm >8eb5_A:beta-beta-alpha_zinc_fingers; title=TANDEM OF HERMES TRANSPOSASE BED DOMAIN IN COMPLEX WITH THE QUASI PALINDROME OF ITS TRANSPOSON LEFT-END organism=Musca domestica DNA sequence DC(C1) DA(C2) DA(C3) DC(C4) DA(C5) DA(C6) DG(C7) DT(C8) DG(C9) DG(C10) DC(C11) DT(C12) DT(C13) DA(C14) DT(C15) DT(C16) DT(C17) chainA ( 60) ARG63 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 ( 61) GLN64 0 0 0 0 0 0 0 0 0 0 13 2 0 0 0 0 0 ( 63) SER66 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 67) ARG70 0 0 0 0 0 0 0 19 15 1 0 0 0 0 0 0 0 prot.sequence mdnlevkakinqglykitprhkgtsfiwnvladiqkeddtlvegwvfcrkcekvlkyttRQtSnlcRhkccasl >8ebh_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAGCGGAATGGGG) organism=Homo sapiens DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DG(C6):DC(D28) DC(C7):DG(D27) DG(C8):DC(D26) DG(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DT(C12):DA(D22) DG(C13):DC(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLN226 0 0 0 0 3 4 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 14 16 10 0 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) ARG233 0 0 0 0 10 8 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8ebs_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=INITIAL DNA-LESION (CY5) BINDING BY XPC AND TFIIH organism=? DNA sequence DA(L1):DT(M56) DG(L2):DC(M55) DG(L3):DC(M54) DT(L4):DA(M53) DA(L5):DT(M52) DG(L6):DC(M51) DT(L7):DA(M50) DC(L8):DG(M49) DA(L9):DT(M48) DC(L10):DG(M47) DA(L11):DT(M46) DG(L12):DC(M45) DC(L13):DG(M44) DT(L14):DA(M43) DG(L15):DC(M42) DA(L16):DT(M41) DT(L17):DA(M40) DT(L18):DA(M39) DG(L19):DC(M38) DC(L20):DG(M37) DG(L21):DC(M36) DC(L22):DG(M35) DT(L23):DA(M34) DG(L24):DC(M33) DA(L25):DT(M32) DG(L26):DC(M31) DG(L27):DC(M30) DA(L28):DT(M29) DT(L29):DA(M28) DT(L31):DA(M25) DA(L32):DT(M24) DG(L33):DC(M23) DA(L34):DT(M22) DC(L35):DG(M21) DG(L36):DC(M20) DT(L37):DA(M19) DG(L38):DC(M18) DC(L39):DG(M17) DG(L40):DC(M16) DA(L41):DT(M15) DT(L42):DA(M14) DA(L43):DT(M13) DT(L44):DA(M12) DC(L45):DG(M11) DT(L46):DA(M10) DA(L47):DT(M9) DT(L48):DA(M8) DG(L49):DC(M7) DC(L50):DG(M6) DC(L51):DG(M5) DA(L52):DT(M4) chainA (306) HIS415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (419) LYS528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrnsegeatetvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlgHttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktKkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat >8ebs_AH: title=INITIAL DNA-LESION (CY5) BINDING BY XPC AND TFIIH organism=? DNA sequence DT(M4):DA(L52) DG(M5):DC(L51) DG(M6):DC(L50) DC(M7):DG(L49) DA(M8):DT(L48) DT(M9):DA(L47) DA(M10):DT(L46) DG(M11):DC(L45) DA(M12):DT(L44) DT(M13):DA(L43) DA(M14):DT(L42) DT(M15):DA(L41) DC(M16):DG(L40) DG(M17):DC(L39) DC(M18):DG(L38) DA(M19):DT(L37) DC(M20):DG(L36) DG(M21):DC(L35) DT(M22):DA(L34) DC(M23):DG(L33) DT(M24):DA(L32) DA(M25):DT(L31) DA(M28):DT(L29) DT(M29):DA(L28) DC(M30):DG(L27) DC(M31):DG(L26) DT(M32):DA(L25) DC(M33):DG(L24) DA(M34):DT(L23) DG(M35):DC(L22) DC(M36):DG(L21) DG(M37):DC(L20) DC(M38):DG(L19) DA(M39):DT(L18) DA(M40):DT(L17) DT(M41):DA(L16) DC(M42):DG(L15) DA(M43):DT(L14) DG(M44):DC(L13) DC(M45):DG(L12) DT(M46):DA(L11) DG(M47):DC(L10) DT(M48):DA(L9) DG(M49):DC(L8) DA(M50):DT(L7) DC(M51):DG(L6) DT(M52):DA(L5) DA(M53):DT(L4) DC(M54):DG(L3) DC(M55):DG(L2) DT(M56):DA(L1) chainA (306) HIS415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (419) LYS528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 19) GLU185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) PHE756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (384) TYR760 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) ILE794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (422) ASP798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) PHE799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) HIS800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) HIS805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (430) PRO806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrnsegeatetvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlgHttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktKkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/ietpeqaktrersekiklEfetylrramkrfnkgvhedthkvhllcllangfyrnnicsqpdlhaiglsiiparftrvlprdvdtyylsnlvkwfigtftvnaelsaseqdnlqttlerrfaiysarddeelvhifllilralqlltrlvlslqwlevfceqeekwvcvdcvhgvvgqpltcykyatkpmtyvvgidsdgwvrdvtqrydpvwmtvtrkcrvdaewwaetlrpyqspfmdrekkedlefqakhmdqplptaiglyknhplyalkrhllkyeaiypetaailgycrgeavysrdcvhtlhsrdtwlkkarvvrlgevpykmvkgfsnrarkarlaepqlreendlglfgywqteeyqppvavdgkvprneFgnvYlflpsmmpigcvqlnlpnlhrvarkldidcvqaItgfDFHggysHPvtdgyivceefkdvlltaweneqavierkekekkekralgnwkllakgllirerlkrryggtssqaeaarilaaswpqnredeeklfpf >8ebt_ABHK:Putative_DNA-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=XPA REPOSITIONING CORE7 OF TFIIH RELATIVE TO XPC-DNA LESION (CY5) organism=? DNA sequence DA(L1):DT(M56) DG(L2):DC(M55) DG(L3):DC(M54) DT(L4):DA(M53) DA(L5):DT(M52) DG(L6):DC(M51) DT(L7):DA(M50) DC(L8):DG(M49) DA(L9):DT(M48) DC(L10):DG(M47) DA(L11):DT(M46) DG(L12):DC(M45) DC(L13):DG(M44) DT(L14):DA(M43) DG(L15):DC(M42) DA(L16):DT(M41) DT(L17):DA(M40) DT(L18):DA(M39) DG(L19):DC(M38) DC(L20):DG(M37) DG(L21):DC(M36) DC(L22):DG(M35) DT(L23):DA(M34) DG(L24):DC(M33) DA(L25):DT(M32) DG(L26):DC(M31) DG(L27):DC(M30) DA(L28):DT(M29) DT(L29):DA(M28) DT(L31):DA(M25) DA(L32):DT(M24) DG(L33):DC(M23) DA(L34):DT(M22) DC(L35):DG(M21) DG(L36):DC(M20) DT(L37):DA(M19) DG(L38):DC(M18) DC(L39):DG(M17) DG(L40):DC(M16) DA(L41):DT(M15) DT(L42):DA(M14) DA(L43):DT(M13) DT(L44):DA(M12) chainA (500) LYS609 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (520) HIS629 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (454) LYS507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) GLU509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (122) PHE756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) PHE797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ASP798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) HIS800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) HIS805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) PRO806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 41) THR142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) TRP175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 76 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrnsegeatetvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqissHggsrrqeaqrlgrvlrynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaatd/mklnvdgllvyfpydyiypeqfsymrelkrtldakghgvlempsgtgktvsllalimayqrayplevtkliycsrtvpeiekvieelrkllnfyekqegeklpflglalssrknlcihpevtplrfgkdvdgkchsltasyvraqyqhdtslphcrfyeefdahgrevplpagiynlddlkalgrrqgwcpyflarysilhanvvvysyhylldpkiadlvskelarkavvvfdeahnidnvcidsmsvnltrrtldrcqgnletlqktvlraehflgflrrlleyvkwrlrvqhvvqesppaflsglaqrvciqrkplrfcaerlrsllhtleitdladfspltllanfatlvstyakgftiiiepfddrtptianpilhfscmdaslaikpvferfqsviitsgtlspldiypkildfhpvtmatftmtlarvclcpmiigrgndqvaissKfEtrediavirnygnlllemsavvpdgivafftsyqymestvaswyeqgileniqrnkllfietqdgaetsvalekyqeacengrgaillsvargkvsegidfvhhygravimfgvpyvytqsrilkarleylrdqfqirendfltfdamrhaaqcvgrairgktdyglmvfadkrfargdkrgklprwiqehltdanlnltvdegvqvakyflrqmaqpfhr/ptaiglyknhplyalkrhllkyeaiypetaailgycrgeavysrdcvhtlhsrdtwlkkarvvrlgevpykmvkgfsnrarkarlaepqlreendlglfgywqteeyqppvavdgkvprneFgnvylflpsmmpigcvqlnlpnlhrvarkldidcvqaitgFDfHggysHPvtdgyivceefkdvlltaweneqavierkekekkekralgnwkllakgllirerlkrryggtssqaeaarilaaswpqnredeekqkekkaaashlfpfekl/yviceecgkefmdsylmnhfdlptcdncrdaddkhklitkTeakqeyllkdcdlekrepplkfivkknphHsQWgdmklylklqivkrslevwgsqealeeakevrqenrekmkqkkfdkkvkelrravrssvwkretivhqheygpeenleddmyrktctmcgheltyekm >8ebt_K:Putative_DNA-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=XPA REPOSITIONING CORE7 OF TFIIH RELATIVE TO XPC-DNA LESION (CY5) organism=? DNA sequence DA(M12):DT(L44) DT(M13):DA(L43) DA(M14):DT(L42) DT(M15):DA(L41) DC(M16):DG(L40) DG(M17):DC(L39) DC(M18):DG(L38) DA(M19):DT(L37) DC(M20):DG(L36) DG(M21):DC(L35) DT(M22):DA(L34) DC(M23):DG(L33) DT(M24):DA(L32) DA(M25):DT(L31) DA(M28):DT(L29) DT(M29):DA(L28) DC(M30):DG(L27) DC(M31):DG(L26) DT(M32):DA(L25) DC(M33):DG(L24) DA(M34):DT(L23) DG(M35):DC(L22) DC(M36):DG(L21) DG(M37):DC(L20) DC(M38):DG(L19) DA(M39):DT(L18) DA(M40):DT(L17) DT(M41):DA(L16) DC(M42):DG(L15) DA(M43):DT(L14) DG(M44):DC(L13) DC(M45):DG(L12) DT(M46):DA(L11) DG(M47):DC(L10) DT(M48):DA(L9) DG(M49):DC(L8) DA(M50):DT(L7) DC(M51):DG(L6) DT(M52):DA(L5) DA(M53):DT(L4) DC(M54):DG(L3) DC(M55):DG(L2) DT(M56):DA(L1) chainK ( 41) THR142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) TRP175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence yviceecgkefmdsylmnhfdlptcdncrdaddkhklitkTeakqeyllkdcdlekrepplkfivkknphHsQWgdmklylklqivkrslevwgsqealeeakevrqenrekmkqkkfdkkvkelrravrssvwkretivhqheygpeenleddmyrktctmcgheltyekm >8ebu_ABK: title=XPC RELEASE FROM CORE7-XPA-DNA (CY5) organism=? DNA sequence DA(L1):DT(M56) DG(L2):DC(M55) DG(L3):DC(M54) DT(L4):DA(M53) DA(L5):DT(M52) DG(L6):DC(M51) DT(L7):DA(M50) DC(L8):DG(M49) DA(L9):DT(M48) DC(L10):DG(M47) DA(L11):DT(M46) DG(L12):DC(M45) DC(L13):DG(M44) DT(L14):DA(M43) DG(L15):DC(M42) DA(L16):DT(M41) DT(L17):DA(M40) DT(L18):DA(M39) DG(L19):DC(M38) DC(L20):DG(M37) DG(L21):DC(M36) DC(L22):DG(M35) chainA (500) LYS609 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 (520) HIS629 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (633) ARG686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainK ( 41) THR142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 74) TRP175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 prot.sequence kvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrnsegeatetvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqissHggsrrqeaqrlgrvlrynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaatdl/mklnvdgllvyfpydyiypeqfsymrelkrtldakghgvlempsgtgktvsllalimayqrayplevtkliycsrtvpeiekvieelrkllnfyekqegeklpflglalssrknlcihpevtplrfgkdvdgkchsltasyvraqyqhdtslphcrfyeefdahgrevplpagiynlddlkalgrrqgwcpyflarysilhanvvvysyhylldpkiadlvskelarkavvvfdeahnidnvcidsmsvnltrrtldrcqgnletlqktvlraehflgflrrlleyvkwrlrvqhvvqesppaflsglaqrvciqrkplrfcaerlrsllhtleitdladfspltllanfatlvstyakgftiiiepfddrtptianpilhfscmdaslaikpvferfqsviitsgtlspldiypkildfhpvtmatftmtlarvclcpmiigrgndqvaisskfetrediavirnygnlllemsavvpdgivafftsyqymestvaswyeqgileniqrnkllfietqdgaetsvalekyqeacengrgaillsvargkvsegidfvhhygravimfgvpyvytqsrilkarleylrdqfqirendfltfdamrhaaqcvgrairgktdyglmvfadkrfaRgdkrgklprwiqehltdanlnltvdegvqvakyflrqmaqpfhr/yviceecgkefmdsylmnhfdlptcdncrdaddkhklitkTeakqeyllkdcdlekrepplkfivkknphhsqWgdmklylklqivkrslevwgsqealeeakevrqenrekmkqkkfdkkvkelrravrssvwkretivhqheygpeenleddmyrktctmcgheltyekm >8ebu_K:Putative_DNA-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=XPC RELEASE FROM CORE7-XPA-DNA (CY5) organism=? DNA sequence DG(M35):DC(L22) DC(M36):DG(L21) DG(M37):DC(L20) DC(M38):DG(L19) DA(M39):DT(L18) DA(M40):DT(L17) DT(M41):DA(L16) DC(M42):DG(L15) DA(M43):DT(L14) DG(M44):DC(L13) DC(M45):DG(L12) DT(M46):DA(L11) DG(M47):DC(L10) DT(M48):DA(L9) DG(M49):DC(L8) DA(M50):DT(L7) DC(M51):DG(L6) DT(M52):DA(L5) DA(M53):DT(L4) DC(M54):DG(L3) DC(M55):DG(L2) DT(M56):DA(L1) chainK ( 41) THR142 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) TRP175 43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence yviceecgkefmdsylmnhfdlptcdncrdaddkhklitkTeakqeyllkdcdlekrepplkfivkknphhsqWgdmklylklqivkrslevwgsqealeeakevrqenrekmkqkkfdkkvkelrravrssvwkretivhqheygpeenleddmyrktctmcgheltyekm >8ebv_AH: title=INITIAL DNA-LESION (AP) BINDING BY XPC AND TFIIH COMPLEX 1 organism=? DNA sequence DT(M4):DA(L53) DG(M5):DC(L52) DG(M6):DC(L51) DC(M7):DG(L50) DA(M8):DT(L49) DT(M9):DA(L48) DA(M10):DT(L47) DG(M11):DC(L46) DA(M12):DT(L45) DT(M13):DA(L44) DA(M14):DT(L43) DT(M15):DA(L42) DC(M16):DG(L41) DG(M17):DC(L40) DC(M18):DG(L39) DA(M19):DT(L38) DC(M20):DG(L37) DG(M21):DC(L36) DT(M22):DA(L35) DC(M23):DG(L34) DT(M24):DA(L33) DA(M25):DT(L32) DT(M26):3DR(L31) DT(M27):3DR(L30) DA(M28):DT(L29) DT(M29):DA(L28) DC(M30):DG(L27) DC(M31):DG(L26) DT(M32):DA(L25) DC(M33):DG(L24) DA(M34):DT(L23) DG(M35):DC(L22) DC(M36):DG(L21) DG(M37):DC(L20) DC(M38):DG(L19) DA(M39):DT(L18) DA(M40):DT(L17) DT(M41):DA(L16) DC(M42):DG(L15) DA(M43):DT(L14) DG(M44):DC(L13) DC(M45):DG(L12) DT(M46):DA(L11) DG(M47):DC(L10) DT(M48):DA(L9) DG(M49):DC(L8) DA(M50):DT(L7) DC(M51):DG(L6) DT(M52):DA(L5) DA(M53):DT(L4) DC(M54):DG(L3) DC(M55):DG(L2) DT(M56):DA(L1) chainA (419) LYS528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (500) LYS609 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 26) ARG192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) HIS685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) SER686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) LYS692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (354) LEU730 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) LEU732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) ASN754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) PHE756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (384) TYR760 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) PHE762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) ILE794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) PHE797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) PHE799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) HIS800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) HIS805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (430) PRO806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrnsegeatetvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktKkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaatdld/ietpeqaktrersekiklefetylrRamkrfnkgvhedthkvhllcllangfyrnnicsqpdlhaiglsiiparftrvlprdvdtyylsnlvkwfigtftvnaelsaseqdnlqttlerrfaiysarddeelvhifllilralqlltrlvlslqwlevfceqeekwvcvdcvhgvvgqpltcykyatkpmtyvvgidsdgwvrdvtqrydpvwmtvtrkcrvdaewwaetlrpyqspfmdrekkedlefqakhmdqplptaiglyknhplyalkrhllkyeaiypetaailgycrgeavysrdcvhtlHSrdTwlKkarvvrlgevpykmvkgfsnrarkarlaepqlreendLgLfgywqteeyqppvavdgkvprNeFgnvYlFlpsmmpigcvqlnlpnlhrvarkldidcvqaItgFdFHggysHPvtdgyivceefkdvlltaweneqavierkekekkekralgnwkllakgllirerlkrrygarilaaswpqnred >8ebv_H:Cysteine_proteinases; title=INITIAL DNA-LESION (AP) BINDING BY XPC AND TFIIH COMPLEX 1 organism=? DNA sequence DA(L1):DT(M56) DG(L2):DC(M55) DG(L3):DC(M54) DT(L4):DA(M53) DA(L5):DT(M52) DG(L6):DC(M51) DT(L7):DA(M50) DC(L8):DG(M49) DA(L9):DT(M48) DC(L10):DG(M47) DA(L11):DT(M46) DG(L12):DC(M45) DC(L13):DG(M44) DT(L14):DA(M43) DG(L15):DC(M42) DA(L16):DT(M41) DT(L17):DA(M40) DT(L18):DA(M39) DG(L19):DC(M38) DC(L20):DG(M37) DG(L21):DC(M36) DC(L22):DG(M35) DT(L23):DA(M34) DG(L24):DC(M33) DA(L25):DT(M32) DG(L26):DC(M31) DG(L27):DC(M30) DA(L28):DT(M29) DT(L29):DA(M28) 3DR(L30):DT(M27) 3DR(L31):DT(M26) DT(L32):DA(M25) DA(L33):DT(M24) DG(L34):DC(M23) DA(L35):DT(M22) DC(L36):DG(M21) DG(L37):DC(M20) DT(L38):DA(M19) DG(L39):DC(M18) DC(L40):DG(M17) DG(L41):DC(M16) DA(L42):DT(M15) DT(L43):DA(M14) DA(L44):DT(M13) DT(L45):DA(M12) DC(L46):DG(M11) DT(L47):DA(M10) DA(L48):DT(M9) DT(L49):DA(M8) DG(L50):DC(M7) DC(L51):DG(M6) DC(L52):DG(M5) DA(L53):DT(M4) chainH ( 26) ARG192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) HIS685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) SER686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) LYS692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (354) LEU730 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (356) LEU732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) ASN754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) PHE756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (384) TYR760 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) PHE762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) ILE794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) PHE797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) PHE799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) HIS800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) HIS805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (430) PRO806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ietpeqaktrersekiklefetylrRamkrfnkgvhedthkvhllcllangfyrnnicsqpdlhaiglsiiparftrvlprdvdtyylsnlvkwfigtftvnaelsaseqdnlqttlerrfaiysarddeelvhifllilralqlltrlvlslqwlevfceqeekwvcvdcvhgvvgqpltcykyatkpmtyvvgidsdgwvrdvtqrydpvwmtvtrkcrvdaewwaetlrpyqspfmdrekkedlefqakhmdqplptaiglyknhplyalkrhllkyeaiypetaailgycrgeavysrdcvhtlHSrdTwlKkarvvrlgevpykmvkgfsnrarkarlaepqlreendLgLfgywqteeyqppvavdgkvprNeFgnvYlFlpsmmpigcvqlnlpnlhrvarkldidcvqaItgFdFHggysHPvtdgyivceefkdvlltaweneqavierkekekkekralgnwkllakgllirerlkrrygarilaaswpqnred >8ebw_AH: title=INITIAL DNA-LESION (AP) BINDING BY XPC AND TFIIH COMPLEX2 organism=? DNA sequence DA(L1):DT(M56) DG(L2):DC(M55) DG(L3):DC(M54) DT(L4):DA(M53) DA(L5):DT(M52) DG(L6):DC(M51) DT(L7):DA(M50) DC(L8):DG(M49) DA(L9):DT(M48) DC(L10):DG(M47) DA(L11):DT(M46) DG(L12):DC(M45) DC(L13):DG(M44) DT(L14):DA(M43) DG(L15):DC(M42) DA(L16):DT(M41) DT(L17):DA(M40) DT(L18):DA(M39) DG(L19):DC(M38) DC(L20):DG(M37) DG(L21):DC(M36) DC(L22):DG(M35) DT(L23):DA(M34) DG(L24):DC(M33) DA(L25):DT(M32) DG(L26):DC(M31) DG(L27):DC(M30) DA(L28):DT(M29) DT(L29):DA(M28) 3DR(L30):DT(M27) 3DR(L31):DT(M26) DT(L32):DA(M25) DA(L33):DT(M24) DG(L34):DC(M23) DA(L35):DT(M22) DC(L36):DG(M21) DG(L37):DC(M20) DT(L38):DA(M19) DG(L39):DC(M18) DC(L40):DG(M17) DG(L41):DC(M16) DA(L42):DT(M15) DT(L43):DA(M14) DA(L44):DT(M13) DT(L45):DA(M12) DC(L46):DG(M11) DT(L47):DA(M10) DA(L48):DT(M9) DT(L49):DA(M8) DG(L50):DC(M7) DC(L51):DG(M6) DC(L52):DG(M5) DA(L53):DT(M4) chainA (419) LYS528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (266) LYS642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) SER686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) ASP688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) LYS692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) ASN754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) PHE756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) ASN758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (384) TYR760 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) PHE762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) ILE794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) PHE797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) PHE799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) HIS800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) HIS805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (430) PRO806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrnsegeatetvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktKkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaatdld/ietpeqaktrersekiklefetylrramkrfnkgvhedthkvhllcllangfyrnnicsqpdlhaiglsiiparftrvlprdvdtyylsnlvkwfigtftvnaelsaseqdnlqttlerrfaiysarddeelvhifllilralqlltrlvlslqwlevfceqeekwvcvdcvhgvvgqpltcykyatkpmtyvvgidsdgwvrdvtqrydpvwmtvtrkcrvdaewwaetlrpyqspfmdrekkedlefqakhmdqplptaiglyKnhplyalkrhllkyeaiypetaailgycrgeavysrdcvhtlhSrDTwlKkarvvrlgevpykmvkgfsnrarkarlaepqlreendlglfgywqteeyqppvavdgkvprNeFgNvYlFlpsmmpigcvqlnlpnlhrvarkldidcvqaItgFdFHggysHPvtdgyivceefkdvlltaweneqavierkekekkekralgnwkllakgllirerlkrrygpgtssqaeaarilaaswpqnredeekqklkaaashlfpfekl >8ebw_H:Cysteine_proteinases; title=INITIAL DNA-LESION (AP) BINDING BY XPC AND TFIIH COMPLEX2 organism=? DNA sequence DT(M4):DA(L53) DG(M5):DC(L52) DG(M6):DC(L51) DC(M7):DG(L50) DA(M8):DT(L49) DT(M9):DA(L48) DA(M10):DT(L47) DG(M11):DC(L46) DA(M12):DT(L45) DT(M13):DA(L44) DA(M14):DT(L43) DT(M15):DA(L42) DC(M16):DG(L41) DG(M17):DC(L40) DC(M18):DG(L39) DA(M19):DT(L38) DC(M20):DG(L37) DG(M21):DC(L36) DT(M22):DA(L35) DC(M23):DG(L34) DT(M24):DA(L33) DA(M25):DT(L32) DT(M26):3DR(L31) DT(M27):3DR(L30) DA(M28):DT(L29) DT(M29):DA(L28) DC(M30):DG(L27) DC(M31):DG(L26) DT(M32):DA(L25) DC(M33):DG(L24) DA(M34):DT(L23) DG(M35):DC(L22) DC(M36):DG(L21) DG(M37):DC(L20) DC(M38):DG(L19) DA(M39):DT(L18) DA(M40):DT(L17) DT(M41):DA(L16) DC(M42):DG(L15) DA(M43):DT(L14) DG(M44):DC(L13) DC(M45):DG(L12) DT(M46):DA(L11) DG(M47):DC(L10) DT(M48):DA(L9) DG(M49):DC(L8) DA(M50):DT(L7) DC(M51):DG(L6) DT(M52):DA(L5) DA(M53):DT(L4) DC(M54):DG(L3) DC(M55):DG(L2) DT(M56):DA(L1) chainH (266) LYS642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) SER686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) ASP688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) LYS692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (378) ASN754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) PHE756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) ASN758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (384) TYR760 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) PHE762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) ILE794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (421) PHE797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) PHE799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) HIS800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) HIS805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (430) PRO806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ietpeqaktrersekiklefetylrramkrfnkgvhedthkvhllcllangfyrnnicsqpdlhaiglsiiparftrvlprdvdtyylsnlvkwfigtftvnaelsaseqdnlqttlerrfaiysarddeelvhifllilralqlltrlvlslqwlevfceqeekwvcvdcvhgvvgqpltcykyatkpmtyvvgidsdgwvrdvtqrydpvwmtvtrkcrvdaewwaetlrpyqspfmdrekkedlefqakhmdqplptaiglyKnhplyalkrhllkyeaiypetaailgycrgeavysrdcvhtlhSrDTwlKkarvvrlgevpykmvkgfsnrarkarlaepqlreendlglfgywqteeyqppvavdgkvprNeFgNvYlFlpsmmpigcvqlnlpnlhrvarkldidcvqaItgFdFHggysHPvtdgyivceefkdvlltaweneqavierkekekkekralgnwkllakgllirerlkrrygpgtssqaeaarilaaswpqnredeekqklkaaashlfpfekl >8ebx_ABHK:Putative_DNA-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=XPA REPOSITIONING CORE7 OF TFIIH RELATIVE TO XPC-DNA LESION (AP) organism=? DNA sequence DG(M17):DC(L40) DC(M18):DG(L39) DA(M19):DT(L38) DC(M20):DG(L37) DG(M21):DC(L36) DT(M22):DA(L35) DC(M23):DG(L34) DT(M24):DA(L33) DA(M25):DT(L32) DT(M26):3DR(L31) DT(M27):3DR(L30) DA(M28):DT(L29) DT(M29):DA(L28) DC(M30):DG(L27) DC(M31):DG(L26) DT(M32):DA(L25) DC(M33):DG(L24) DA(M34):DT(L23) DG(M35):DC(L22) DC(M36):DG(L21) DG(M37):DC(L20) DC(M38):DG(L19) DA(M39):DT(L18) DA(M40):DT(L17) DT(M41):DA(L16) DC(M42):DG(L15) DA(M43):DT(L14) DG(M44):DC(L13) DC(M45):DG(L12) DT(M46):DA(L11) DG(M47):DC(L10) DT(M48):DA(L9) DG(M49):DC(L8) DA(M50):DT(L7) DC(M51):DG(L6) DT(M52):DA(L5) DA(M53):DT(L4) DC(M54):DG(L3) DC(M55):DG(L2) DT(M56):DA(L1) chainA (500) LYS609 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 (520) HIS629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 chainB (454) LYS507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) GLU509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 24) LYS655 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) TYR656 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) PHE710 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG715 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) PHE756 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (129) TYR760 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) PHE797 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) HIS805 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) PRO806 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 41) THR142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) TRP175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrnsegeatetvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqissHggsrrqeaqrlgrvlrynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaatdl/mklnvdgllvyfpydyiypeqfsymrelkrtldakghgvlempsgtgktvsllalimayqrayplevtkliycsrtvpeiekvieelrkllnfyekqegeklpflglalssrknlcihpevtplrfgkdvdgkchsltasyvraqyqhdtslphcrfyeefdahgrevplpagiynlddlkalgrrqgwcpyflarysilhanvvvysyhylldpkiadlvskelarkavvvfdeahnidnvcidsmsvnltrrtldrcqgnletlqktvlraehflgflrrlleyvkwrlrvqhvvqesppaflsglaqrvciqrkplrfcaerlrsllhtleitdladfspltllanfatlvstyakgftiiiepfddrtptianpilhfscmdaslaikpvferfqsviitsgtlspldiypkildfhpvtmatftmtlarvclcpmiigrgndqvaissKfEtrediavirnygnlllemsavvpdgivafftsyqymestvaswyeqgileniqrnkllfietqdgaetsvalekyqeacengrgaillsvargkvsegidfvhhygravimfgvpyvytqsrilkarleylrdqfqirendfltfdamrhaaqcvgrairgktdyglmvfadkrfargdkrgklprwiqehltdanlnltvdegvqvakyflrqmaqpfhr/qplptaiglyknhplyalkrhllKYeaiypetaailgycrgeavysrdcvhtlhsrdtwlkkarvvrlgevpykmvkgFsnraRkarlaepqlreendlglfgywqteeyqppvavdgkvprneFgnvYlflpsmmpigcvqlnlpnlhrvarkldidcvqaitgFdfhggysHPvtdgyivceefkdvlltaweneqavierkekekkekralgnwkllakgllirerlkrrygpgtssqaeaarilaaswpqnredeekqklkggpkktkrekkaaashlfpfekl/yviceecgkefmdsylmnhfdlptcdncrdaddkhklitkTeakqeyllkdcdlekrepplkfivkknphHsQWgdmklylklqivkrslevwgsqealeeakevrqenrekmkqkkfdkkvkelrravrssvwkretivhqheygpeenleddmyrktctmcgheltyekm >8ebx_K:Putative_DNA-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=XPA REPOSITIONING CORE7 OF TFIIH RELATIVE TO XPC-DNA LESION (AP) organism=? DNA sequence DA(L1):DT(M56) DG(L2):DC(M55) DG(L3):DC(M54) DT(L4):DA(M53) DA(L5):DT(M52) DG(L6):DC(M51) DT(L7):DA(M50) DC(L8):DG(M49) DA(L9):DT(M48) DC(L10):DG(M47) DA(L11):DT(M46) DG(L12):DC(M45) DC(L13):DG(M44) DT(L14):DA(M43) DG(L15):DC(M42) DA(L16):DT(M41) DT(L17):DA(M40) DT(L18):DA(M39) DG(L19):DC(M38) DC(L20):DG(M37) DG(L21):DC(M36) DC(L22):DG(M35) DT(L23):DA(M34) DG(L24):DC(M33) DA(L25):DT(M32) DG(L26):DC(M31) DG(L27):DC(M30) DA(L28):DT(M29) DT(L29):DA(M28) 3DR(L30):DT(M27) 3DR(L31):DT(M26) DT(L32):DA(M25) DA(L33):DT(M24) DG(L34):DC(M23) DA(L35):DT(M22) DC(L36):DG(M21) DG(L37):DC(M20) DT(L38):DA(M19) DG(L39):DC(M18) DC(L40):DG(M17) chainK ( 41) THR142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) HIS172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) GLN174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) TRP175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 73 49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence yviceecgkefmdsylmnhfdlptcdncrdaddkhklitkTeakqeyllkdcdlekrepplkfivkknphHsQWgdmklylklqivkrslevwgsqealeeakevrqenrekmkqkkfdkkvkelrravrssvwkretivhqheygpeenleddmyrktctmcgheltyekm >8eby_ABK: title=XPC RELEASE FROM CORE7-XPA-DNA (AP) organism=? DNA sequence DG(M35):DC(L22) DC(M36):DG(L21) DG(M37):DC(L20) DC(M38):DG(L19) DA(M39):DT(L18) DA(M40):DT(L17) DT(M41):DA(L16) DC(M42):DG(L15) DA(M43):DT(L14) DG(M44):DC(L13) DC(M45):DG(L12) DT(M46):DA(L11) DG(M47):DC(L10) DT(M48):DA(L9) DG(M49):DC(L8) DA(M50):DT(L7) DC(M51):DG(L6) DT(M52):DA(L5) DA(M53):DT(L4) DC(M54):DG(L3) DC(M55):DG(L2) DT(M56):DA(L1) chainA (500) LYS609 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 (520) HIS629 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 chainB chainK ( 41) THR142 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) TRP175 49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrnsegeatetvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifisKvgdtsfdlpeanvliqissHggsrrqeaqrlgrvlrynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaatdl/mklnvdgllvyfpydyiypeqfsymrelkrtldakghgvlempsgtgktvsllalimayqrayplevtkliycsrtvpeiekvieelrkllnfyekqegeklpflglalssrknlcihpevtplrfgkdvdgkchsltasyvraqyqhdtslphcrfyeefdahgrevplpagiynlddlkalgrrqgwcpyflarysilhanvvvysyhylldpkiadlvskelarkavvvfdeahnidnvcidsmsvnltrrtldrcqgnletlqktvlraehflgflrrlleyvkwrlrvqhvvqesppaflsglaqrvciqrkplrfcaerlrsllhtleitdladfspltllanfatlvstyakgftiiiepfddrtptianpilhfscmdaslaikpvferfqsviitsgtlspldiypkildfhpvtmatftmtlarvclcpmiigrgndqvaisskfetrediavirnygnlllemsavvpdgivafftsyqymestvaswYeqgileniqrnkllfietqDgaetsvalekyqeacengrgaillsvargkvsegidfvhhygravimfgvpyvytqsrilkarleylrdqfqirendfltfdamrhaaqcvgrairgktdyglmvfadkrfargdkrgklprwiqehltdanlnltvdegvqvakyflrqmaqpfhr/yviceecgkefmdsylmnhfdlptcdncrdaddkhklitkTeakqeyllkdcdlekrepplkfivkknphhsqWgdmklylklqivkrslevwgsqealeeakevrqenrekmkqkkfdkkvkelrravrssvwkretivhqheygpeenleddmyrktctmcgheltyekm >8eby_K:Putative_DNA-binding_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=XPC RELEASE FROM CORE7-XPA-DNA (AP) organism=? DNA sequence DA(L1):DT(M56) DG(L2):DC(M55) DG(L3):DC(M54) DT(L4):DA(M53) DA(L5):DT(M52) DG(L6):DC(M51) DT(L7):DA(M50) DC(L8):DG(M49) DA(L9):DT(M48) DC(L10):DG(M47) DA(L11):DT(M46) DG(L12):DC(M45) DC(L13):DG(M44) DT(L14):DA(M43) DG(L15):DC(M42) DA(L16):DT(M41) DT(L17):DA(M40) DT(L18):DA(M39) DG(L19):DC(M38) DC(L20):DG(M37) DG(L21):DC(M36) DC(L22):DG(M35) chainK ( 41) THR142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 ( 74) TRP175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 prot.sequence yviceecgkefmdsylmnhfdlptcdncrdaddkhklitkTeakqeyllkdcdlekrepplkfivkknphhsqWgdmklylklqivkrslevwgsqealeeakevrqenrekmkqkkfdkkvkelrravrssvwkretivhqheygpeenleddmyrktctmcgheltyekm >8edg_C:Ribonuclease_H-like;Hermes_dimerisation_domain;beta-beta-alpha_zinc_fingers; title=CRYO-EM STRUCTURE OF THE HERMES TRANSPOSASE BOUND TO TWO LEFT-ENDS OF ITS DNA TRANSPOSON organism=? DNA sequence DA(Q1):DT(R46) DG(Q2):DC(R45) DA(Q3):DT(R44) DG(Q4):DC(R43) DA(Q5):DT(R42) DA(Q6):DT(R41) DC(Q7):DG(R40) DA(Q8):DT(R39) DA(Q9):DT(R38) DC(Q10):DG(R37) DA(Q11):DT(R36) DA(Q12):DT(R35) DC(Q13):DG(R34) DA(Q14):DT(R33) DA(Q15):DT(R32) DG(Q16):DC(R31) DT(Q17):DA(R30) DG(Q18):DC(R29) DG(Q19):DC(R28) DC(Q20):DG(R27) DT(Q21):DA(R25) DT(Q22):DT(R24) DT(Q24):DA(R23) DT(Q25):DA(R22) DT(Q26):DA(R21) DT(Q27):DA(R20) DG(Q28):DC(R19) DA(Q29):DT(R18) DT(Q30):DA(R17) DA(Q31):DT(R16) DC(Q32):DG(R15) DT(Q33):DA(R13) DA(Q35):DT(R12) DG(Q37):DC(R10) DC(Q38):DG(R9) DG(Q39):DC(R8) DC(Q40):DG(R7) DC(Q41):DG(R6) DA(Q42):DT(R5) DC(Q43):DG(R4) DT(Q44):DA(R3) DT(Q45):DC(R1) chainC ( 60) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 61) GLN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 23 0 0 0 0 0 0 0 0 0 0 ( 62) THR65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 63) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 ( 64) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 9 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (107) SER110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (316) TRP319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence mdnlevkakinqglykitprhkgtsfiwnvladiqkeddtlvegwvfcrkcekvlkyttRQTSNlcRhkccaslkqsrelktvsadckkeaiekcaqwvvrdcrpfSavsgsgfidmikffikvgaeygehvnveellpspitlsrkvtsdakekkalisreiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstaeniykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetpelnmpilacknivkyfkkanlqhrlrsslksecptrWnstytmlrsildnwesviqilseagetqrivhinksiiqtmvnildgferifkelqtcsspslcfvvpsilkvkeicspdvgdvadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedpvcpsdefefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaasertfslagniitekrnrigqqtvdsllflnsfyknfck >8edg_CGK:Ribonuclease_H-like;Hermes_dimerisation_domain;beta-beta-alpha_zinc_fingers; title=CRYO-EM STRUCTURE OF THE HERMES TRANSPOSASE BOUND TO TWO LEFT-ENDS OF ITS DNA TRANSPOSON organism=? DNA sequence DA(Q1):DT(R46) DG(Q2):DC(R45) DA(Q3):DT(R44) DG(Q4):DC(R43) DA(Q5):DT(R42) DA(Q6):DT(R41) DC(Q7):DG(R40) DA(Q8):DT(R39) DA(Q9):DT(R38) DC(Q10):DG(R37) DA(Q11):DT(R36) DA(Q12):DT(R35) DC(Q13):DG(R34) DA(Q14):DT(R33) DA(Q15):DT(R32) DG(Q16):DC(R31) DT(Q17):DA(R30) DG(Q18):DC(R29) DG(Q19):DC(R28) DC(Q20):DG(R27) DT(Q21):DA(R25) DT(Q22):DT(R24) DT(Q24):DA(R23) DT(Q25):DA(R22) DT(Q26):DA(R21) DT(Q27):DA(R20) DG(Q28):DC(R19) DA(Q29):DT(R18) DT(Q30):DA(R17) DA(Q31):DT(R16) DC(Q32):DG(R15) DT(Q33):DA(R13) DA(Q35):DT(R12) DG(Q37):DC(R10) DC(Q38):DG(R9) DG(Q39):DC(R8) DC(Q40):DG(R7) DC(Q41):DG(R6) DA(Q42):DT(R5) DC(Q43):DG(R4) DT(Q44):DA(R3) DT(Q45):DC(R1) chainC ( 60) ARG63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 ( 61) GLN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 23 0 0 0 0 0 0 0 0 0 0 ( 62) THR65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 63) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 ( 64) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 14 9 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (107) SER110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (316) TRP319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 chainG ( 61) GLN64 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR65 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (315) ARG318 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (517) SER576 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 61) GLN64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) THR65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) SER66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ASN67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ARG70 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdnlevkakinqglykitprhkgtsfiwnvladiqkeddtlvegwvfcrkcekvlkyttRQTSNlcRhkccaslkqsrelktvsadckkeaiekcaqwvvrdcrpfSavsgsgfidmikffikvgaeygehvnveellpspitlsrkvtsdakekkalisreiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstaeniykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetpelnmpilacknivkyfkkanlqhrlrsslksecptrWnstytmlrsildnwesviqilseagetqrivhinksiiqtmvnildgferifkelqtcsspslcfvvpsilkvkeicspdvgdvadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedpvcpsdefefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaasertfslagniitekrnrigqqtvdsllflnsfyknfck/mdnlevkakinqglykitprhkgtsfiwnvladiqkeddtlvegwvfcrkcekvlkyttrQTSNlcRhkccaslkqsrelktvsadckkeaiekcaqwvvrdcrpfsavsgsgfidmikffikvgaeygehvnveellpspitlsrkvtsdakekkalisreiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstaeniykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetpelnmpilacknivkyfkkanlqhrlrsslksecptRwnstytmlrsildnwesviqilseagetqrivhinksiiqtmvnildgferifkelqtcsspslcfvvpsilkvkeicspdvgdvadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedpvcpsdefefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaasertfSlagniitekrnrigqqtvdsllflnsfyknfck/mdnlevkakinqglykitprhkgtsfiwnvladiqkeddtlvegwvfcrkcekvlkyttrQTSNlcRhkccasl >8ee9_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAAAGGAATGGGG) organism=Homo sapiens DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DA(C6):DT(D28) DA(C7):DT(D27) DG(C8):DC(D26) DG(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DT(C12):DA(D22) DG(C13):DC(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLN226 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 14 16 10 0 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) ARG233 0 0 0 0 12 8 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8ef9_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF LATES CALCARIFER DNA POLYMERASE THETA POLYMERASE DOMAIN WITH LONG DUPLEX DNA, COMPLEX IA organism=? DNA sequence DC(E11):DG(F19) DT(E12):DA(F18) DA(E13):DT(F17) DC(E14):DG(F16) DG(E15):DC(F15) DG(E16):DC(F14) DA(E17):DT(F13) DT(E18):DA(F12) DG(E19):DC(F11) DC(E20):DG(F10) chainA (288) LYS2350 0 0 0 4 0 0 0 0 0 0 (320) ARG2382 3 0 0 0 0 0 0 0 0 0 (327) ASN2389 0 0 1 0 0 0 0 0 0 0 (330) ASN2392 3 9 1 0 0 0 0 0 0 0 (548) HIS2663 1 0 0 0 0 0 0 0 0 0 prot.sequence tfsiidvasdrrlfntfikewktkeryslalacekrehdsdglvliglsvcwgardsyyislqqvserlgqvrsclsrpggvvvtydiiqvyktlvlscgislagncedpkvacwlldpgseertlpnmvtvycpeelplldglgsahahcprvraatksvlvhavmnhltgllekdsmldlfrsiempsqvclallelngvgfsveecerqkhvmqakltalesqaynlaghsfsltsiddiaqvlflelhlpqfsttkdileklrplhplpgvilewrritnaltKvvfplqrekqyhptlamdriypiaqthtatgRvsftepNiqNvpkdfeicmafsvsmrhafvpfsggmilaadysqlelrvlahlskdqrllqvlnggadvfrciaaewkgvdpetvndslrqqakqicygiiygmgakslgeqmgveendaacyiesfkarykginaflketvkncikngyvqtlmgrrrylpgisntnthikahaerqavnttvqgsaadivklatvniqkrlrktyptaplshqhtlrgaffvlqlHdeliyetreedliqvaqivkremesavklyvklkakvkvgpswgnlqdldl >8efc_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF LATES CALCARIFER DNA POLYMERASE THETA POLYMERASE DOMAIN WITH LONG DUPLEX DNA, COMPLEX IA organism=? DNA sequence DC(E11):DG(F19) DT(E12):DA(F18) DA(E13):DT(F17) DC(E14):DG(F16) DG(E15):DC(F15) DG(E16):DC(F14) DA(E17):DT(F13) DT(E18):DA(F12) DG(E19):DC(F11) DC(E20):DG(F10) DC(E21):DG(F9) DT(E22):DA(F8) DC(E23):DG(F7) DA(E24):DT(F6) DC(E25):DG(F5) DA(E26):DT(F4) DG(E27):DC(F3) chainA (316) ARG2382 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (326) ASN2392 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) GLN2607 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tfsiidvasdrrlfntfikewktkeryslalacekrehdsdglvliglsvcwgardsyyislqqvserlgqvrsclsrpggvvvtydiiqvyktlvlscgislagncedpkvacwlldpgseertlpnmvtvycpeelplldglahcprvraatksvlvhavmnhltgllekdsmldlfrsiempsqvclallelngvgfsveecerqkhvmqakltalesqaynlaghsfsltsiddiaqvlflelhlpqfsttkdileklrplhplpgvilewrritnaltkvvfplqrekqyhptlamdriypiaqthtatgRvsftepniqNvpkdfeicmafsvsmrhafvpfsggmilaadysqlelrvlahlskdqrllqvlnggadvfrciaaewkgvdpetvndslrqqakqicygiiygmgakslgeqmgveendaacyiesfkarykginaflketvkncikngyvqtlmgrrrylpgisntnthikahaerqavnttvQgsaadivklatvniqkrlrktyptaplshqhtlrgaffvlqlhdeliyetreedliqvaqivkremesavklyvklkakvkvgpswgnlqdldl >8efk_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF LATES CALCARIFER DNA POLYMERASE THETA POLYMERASE DOMAIN WITH HAIRPIN DNA organism=? DNA sequence DT(E2) DT(E3) DT(E4) DT(E5) DG(E6):DC(E20) DG(E7):DC(E19) DC(E8):DG(E18) DT(E9):DT(E17) DT(E15) DT(E16) chainA (319) ARG2382 0 0 0 0 1 0 0 0 0 0 (329) ASN2392 0 0 0 0 1 8 1 0 0 0 (414) GLN2517 0 0 3 0 0 0 0 0 0 0 (421) TYR2524 0 0 6 0 0 0 0 0 0 0 (423) MET2526 0 0 5 0 0 0 0 0 0 0 (431) GLN2534 0 0 1 0 0 0 0 0 0 0 (487) ASN2590 1 0 0 0 0 0 0 0 0 0 (488) THR2591 0 1 0 0 0 0 0 0 0 0 (489) HIS2592 6 15 0 0 0 0 0 0 0 0 (492) ALA2595 0 3 0 0 0 0 0 0 0 0 (496) ARG2599 0 5 0 0 0 0 0 0 0 0 (500) ASN2603 0 0 0 4 0 0 0 0 0 0 (504) GLN2607 0 0 0 1 1 0 0 0 0 0 prot.sequence tfsiidvasdrrlfntfikewktkeryslalacekrehdsdglvliglsvcwgardsyyislqqvserlgqvrsclsrpggvvvtydiiqvyktlvlscgislagncedpkvacwlldpgseertlpnmvtvycpeelplldglgsahahcprvraatksvlvhavmnhltgllekdsmldlfrsiempsqvclallelngvgfsveecerqkhvmqakltalesqaynlaghsfsltsiddiaqvlflelhlpfsttkdileklrplhplpgvilewrritnaltkvvfplqrekqyhptlamdriypiaqthtatgRvsftepniqNvpkdfeicmafsvsmrhafvpfsggmilaadysqlelrvlahlskdqrllqvlnggadvfrciaaewkgvdpetvndslrqqakQicygiiYgMgakslgeQmgveendaacyiesfkarykginaflketvkncikngyvqtlmgrrrylpgisntNTHikAhaeRqavNttvQgsaadivklatvniqkrlrktyptaplshqhtlrgaffvlqlhdeliyetreedliqvaqivkremesavklyvklkakvkvgpswgnlqdldl >8efv_A:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF SINGLE HOMO-HEXAMERIC HOLLIDAY JUNCTION ATP-DEPENDENT DNA HELICASE RUVB MOTOR organism=? DNA sequence DC(H3):DG(G21) DA(H4):DT(G20) DG(H5):DC(G19) DC(H6):DG(G18) DG(H7):DC(G17) DC(H8):DG(G16) DT(H9):DA(G15) DT(H10):DA(G14) DG(H11):DC(G13) DG(H12):DC(G12) DT(H13):DA(G11) DA(H14):DT(G10) DA(H15):DT(G9) DA(H16):DT(G8) DC(H17):DG(G7) DA(H18):DT(G6) DC(H19):DG(G5) DA(H20):DT(G4) DT(H21):DA(G3) DA(H22):DT(G2) DG(H23):DC(G1) chainA (296) ARG300 0 0 9 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence alrpktldeyigqerlkqklrvyleaakarkeplehlllfgppglgkttlahviahelgvnlrvtsgpaiekpgdlaailansleegdilfideihrlsrqaeehlypamedfvmdivigqgpaartirlelprftligattrpglitapllsrfgivehleyytpeelaqgvmrdarllgvriteeaaleigrrsrgtmrvakrlfrrvrdfaqvageevitreralealaalgldelglekrdreilevlilrfgggpvglatlatalsedpgtleevhepylirqgllkrtpRgrvatelayrhlgyppp >8efv_ABCD:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF SINGLE HOMO-HEXAMERIC HOLLIDAY JUNCTION ATP-DEPENDENT DNA HELICASE RUVB MOTOR organism=? DNA sequence DC(G1):DG(H23) DT(G2):DA(H22) DA(G3):DT(H21) DT(G4):DA(H20) DG(G5):DC(H19) DT(G6):DA(H18) DG(G7):DC(H17) DT(G8):DA(H16) DT(G9):DA(H15) DT(G10):DA(H14) DA(G11):DT(H13) DC(G12):DG(H12) DC(G13):DG(H11) DA(G14):DT(H10) DA(G15):DT(H9) DG(G16):DC(H8) DC(G17):DG(H7) DG(G18):DC(H6) DC(G19):DG(H5) DT(G20):DA(H4) DG(G21):DC(H3) chainD (279) ARG300 0 0 0 0 0 0 0 0 0 0 3 7 3 0 0 0 0 0 0 0 0 chainC (284) ARG300 0 0 0 0 0 0 0 0 0 0 0 0 3 11 3 0 0 0 0 0 0 chainB chainA (296) ARG300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 0 0 prot.sequence alrpktldeyigqerlkqklrvyleaakarkeplehlllfgppglgkttlahviahelgvnlrvtsgpaiekpgdlaailansleegdilfideihrlsrqaeehlypamedfvmdivigqgpaartirlelprftligattrpglitapllsrfgivehleyytpeelaqgvmrdarllgvriteeaaleigrrsrgtmrvakrlfrrvrdfaqvageevitreralealaalgldelglekrdreilevlilrfgggpvglatlatalsedpgtleevhepylirqgllkrtpRgrvatelayrhlgyppp/edlalrpktldeyigqerlkqklrvyleaakarkeplehlllfgppglgkttlahviahelgvnlrvtsgpaipgdlaailansleegdilfideihrlsrqaeehlypamedfvmdivigqgpaartirlelprftligattrpglitapllsrfgivehleyytpeelaqgvmrdarllgvriteeaaleigrrsrgtmrvakrlfrrvrdfaqvageevitreralealaalgldelglekrdreilevlilrfgggpvglatlatalsedpgtleevhepylirqgllkrtPrgrvatelayrhlgyppp/edlalrpktldeyigqerlkqklrvyleaakarkeplehlllfgppglgkttlahviahelgvnlrvtsgpaipgdlaailansleegdilfideihrlsrqaeehlypamedfvmrlelprftligattrpglitapllsrfgivehleyytpeelaqgvmrdarllgvriteeaaleigrrsrgtmrvakrlfrrvrdfaqvageevitreralealaalgldelglekrdreilevlilrfgggpvglatlatalsedpgtleevhepylirqgllkrtpRgrvatelayrhlgyppp/rpktldeyigqerlkqklrvyleaakarkeplehlllfgppglgkttlahviahelgvnlrvtsgpaipgdlaailansleegdilfideihrlsrqaeehlypamedfvmrlelprftligattrpglitapllsrfgivehleyytpeelaqgvmrdarllgvriteeaaleigrrsrgtmrvakrlfrrvrdfaqvageevitreralealaalgldelglekrdreilevlilrfgggpvglatlatalsedpgtleevhepylirqgllkrtpRgrvatelayrhlgyppp >8efy_DL:P-loop_containing_nucleoside_triphosphate_hydrolases;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF DOUBLE HOMO-HEXAMERIC AAA+ ATPASE RUVB MOTORS organism=? DNA sequence DA(g1):DT(h24) DT(g2):DA(h23) DT(g3):DA(h22) DC(g4):DG(h21) DT(g5):DA(h20) DA(g6):DT(h19) DT(g7):DA(h18) DG(g8):DC(h17) DT(g9):DA(h16) DG(g10):DC(h15) DT(g11):DA(h14) DT(g12):DA(h13) DT(g13):DA(h12) DA(g14):DT(h11) DC(g15):DG(h10) DC(g16):DG(h9) DA(g17):DT(h8) DA(g18):DT(h7) DG(g19):DC(h6) DC(g20):DG(h5) DG(g21):DC(h4) DC(g22):DG(h3) DT(g23):DA(h2) DG(g24):DC(h1) chainD (292) ARG300 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 6 0 0 0 0 0 0 0 0 chainL prot.sequence rpktldeyigqerlkqklrvyleaakarkeplehlllfgppglgkttlahviahelgvnlrvtsgpaipgdlaailansleegdilfideihrlsrqaeehlypamedfvmdivigqgpaartirlelprftligattrpglitapllsrfgivehleyytpeelaqgvmrdarllgvriteeaaleigrrsrgtmrvakrlfrrvrdfaqvageevitreralealaalgldelglekrdreilevlilrfgggpvglatlatalsedpgtleevhepylirqgllkrtpRgrvatelayrhlgyppp/rpktldeyigqerlkqklrvyleaakarkeplehlllfgppglgkttlahviahelgvnlrvtsgpaipgdlaailansleegdilfideihrlsrqaeehlypamedfvmdivigqgpaartirlelprftligattrpglitapllsrfgivehleyytpeelaqgvmrdarllgvriteeaaleigrrsrgtmrvakrlfrrvrdfaqvageevitreralealaalgldelglekrdreilevlilrfgggpvglatlatalsedpgtleevhepylirqgllkrtpRgrvatelayrhlgyppp >8eg7_IJ: title=CRYO-EM STRUCTURE OF PRE-CONSENSUS ELEMENTAL PAUSED ELONGATION COMPLEX organism=? DNA sequence DT(B1):DA(A32) DC(B2):DG(A31) DT(B3):DA(A30) DG(B4):DC(A29) DA(B5):DT(A28) DA(B6):DT(A27) DT(B7):DA(A26) DT(B8):DA(A25) DT(B9):DA(A24) DA(B10):DT(A23) DC(B11):DG(A22) DG(B12):DC(A21) DG(B13):DC(A20) DG(B14):DC(A19) DC(B15):DG(A18) DG(B16):DC(A17) DC(B17):DT(A16) DA(B18):DT(A15) DA(B19):DG(A7) DC(B20):DC(A6) DT(B21):DC(A5) DA(B22):DT(A4) DT(B23):DG(A3) DG(B24):DC(A2) chainI (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 39 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 17 0 0 0 0 0 0 0 0 chainJ ( 32) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8eg7_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF PRE-CONSENSUS ELEMENTAL PAUSED ELONGATION COMPLEX organism=? DNA sequence DT(B1):DA(A32) DC(B2):DG(A31) DT(B3):DA(A30) DG(B4):DC(A29) DA(B5):DT(A28) DA(B6):DT(A27) DT(B7):DA(A26) DT(B8):DA(A25) DT(B9):DA(A24) DA(B10):DT(A23) DC(B11):DG(A22) DG(B12):DC(A21) DG(B13):DC(A20) DG(B14):DC(A19) DC(B15):DG(A18) DG(B16):DC(A17) DC(B17):DT(A16) DA(B18):DT(A15) DA(B19):DG(A7) DC(B20):DC(A6) DT(B21):DC(A5) DA(B22):DT(A4) DT(B23):DG(A3) DG(B24):DC(A2) chainJ ( 32) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8eg8_IJ: title=CRYO-EM STRUCTURE OF CONSENSUS ELEMENTAL PAUSED ELONGATION COMPLEX WITH A FOLDED TL organism=? DNA sequence DT(B1):DA(A32) DC(B2):DG(A31) DT(B3):DA(A30) DG(B4):DC(A29) DA(B5):DT(A28) DA(B6):DT(A27) DT(B7):DA(A26) DT(B8):DA(A25) DT(B9):DA(A24) DA(B10):DT(A23) DC(B11):DG(A22) DG(B12):DC(A21) DG(B13):DC(A20) DG(B14):DC(A19) DC(B15):DG(A18) DG(B16):DC(A17) DC(B17):DT(A16) DA(B18):DT(A15) DA(B19):DC(A14) DC(B20):DG(A8) DT(B21):DG(A7) DA(B22):DC(A6) DT(B23):DC(A5) DG(B24):DT(A4) DC(B25):DG(A3) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 44 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 17 0 0 0 0 0 0 0 0 0 chainJ (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (917) MET932 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyRRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltMrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8eg8_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF CONSENSUS ELEMENTAL PAUSED ELONGATION COMPLEX WITH A FOLDED TL organism=? DNA sequence DG(A3):DC(B25) DT(A4):DG(B24) DC(A5):DT(B23) DC(A6):DA(B22) DG(A7):DT(B21) DG(A8):DC(B20) DC(A14):DA(B19) DT(A15):DA(B18) DT(A16):DC(B17) DC(A17):DG(B16) DG(A18):DC(B15) DC(A19):DG(B14) DC(A20):DG(B13) DC(A21):DG(B12) DG(A22):DC(B11) DT(A23):DA(B10) DA(A24):DT(B9) DA(A25):DT(B8) DA(A26):DT(B7) DT(A27):DA(B6) DT(A28):DA(B5) DC(A29):DG(B4) DA(A30):DT(B3) DG(A31):DC(B2) DA(A32):DT(B1) chainJ (240) LEU255 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (917) MET932 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggrfatsdlndlyRRviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltMrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8egb_IJ: title=CRYO-EM STRUCTURE OF CONSENSUS ELEMENTAL PAUSED ELONGATION COMPLEX WITH AN UNFOLDED TL organism=? DNA sequence DT(B1):DA(A32) DC(B2):DG(A31) DT(B3):DA(A30) DG(B4):DC(A29) DA(B5):DT(A28) DA(B6):DT(A27) DT(B7):DA(A26) DT(B8):DA(A25) DT(B9):DA(A24) DA(B10):DT(A23) DC(B11):DG(A22) DG(B12):DC(A21) DG(B13):DC(A20) DG(B14):DC(A19) DC(B15):DG(A18) DG(B16):DC(A17) DC(B17):DT(A16) DA(B18):DT(A15) DA(B19):DC(A14) DC(B20):DT(A13) DT(B21):DG(A8) DA(B22):DG(A7) DT(B23):DC(A6) DG(B24):DC(A5) DC(B25):DT(A4) DC(B26):DG(A3) DG(B27):DC(A2) chainI (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 51 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 8 0 0 0 0 0 0 0 0 0 0 0 chainJ (197) THR212 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 (247) THR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (282) ARG297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (283) MET298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggRfaTsdlndlyRRvinrnnrlkrlldlaapdiivrnekRMlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8egb_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF CONSENSUS ELEMENTAL PAUSED ELONGATION COMPLEX WITH AN UNFOLDED TL organism=? DNA sequence DT(B1):DA(A32) DC(B2):DG(A31) DT(B3):DA(A30) DG(B4):DC(A29) DA(B5):DT(A28) DA(B6):DT(A27) DT(B7):DA(A26) DT(B8):DA(A25) DT(B9):DA(A24) DA(B10):DT(A23) DC(B11):DG(A22) DG(B12):DC(A21) DG(B13):DC(A20) DG(B14):DC(A19) DC(B15):DG(A18) DG(B16):DC(A17) DC(B17):DT(A16) DA(B18):DT(A15) DA(B19):DC(A14) DC(B20):DT(A13) DT(B21):DG(A8) DA(B22):DG(A7) DT(B23):DC(A6) DG(B24):DC(A5) DC(B25):DT(A4) DC(B26):DG(A3) DG(B27):DC(A2) chainJ (197) THR212 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 (247) THR262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (282) ARG297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (283) MET298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggRfaTsdlndlyRRvinrnnrlkrlldlaapdiivrnekRMlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqtgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8eh8_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF HIS-ELEMENTAL PAUSED ELONGATION COMPLEX WITH A FOLDED TL AND A ROTATED RH-FL (1) organism=? DNA sequence DT(B2):DA(A31) DC(B3):DG(A30) DT(B4):DA(A29) DG(B5):DC(A28) DA(B6):DT(A27) DA(B7):DT(A26) DT(B8):DA(A25) DC(B9):DG(A24) DT(B10):DA(A23) DC(B11):DG(A22) DT(B12):DA(A21) DT(B13):DA(A20) DC(B14):DG(A19) DC(B15):DG(A18) DA(B16):DC(A17) DG(B17):DT(A16) DC(B18):DT(A15) DA(B19):DC(A6) DC(B20):DC(A5) DA(B21):DT(A4) DC(B22):DG(A3) DA(B23):DC(A2) DT(B24):DG(A1) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 34 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 8 28 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >8eh8_IJ: title=CRYO-EM STRUCTURE OF HIS-ELEMENTAL PAUSED ELONGATION COMPLEX WITH A FOLDED TL AND A ROTATED RH-FL (1) organism=? DNA sequence DT(B2):DA(A31) DC(B3):DG(A30) DT(B4):DA(A29) DG(B5):DC(A28) DA(B6):DT(A27) DA(B7):DT(A26) DT(B8):DA(A25) DC(B9):DG(A24) DT(B10):DA(A23) DC(B11):DG(A22) DT(B12):DA(A21) DT(B13):DA(A20) DC(B14):DG(A19) DC(B15):DG(A18) DA(B16):DC(A17) DG(B17):DT(A16) DC(B18):DT(A15) DA(B19):DC(A6) DC(B20):DC(A5) DA(B21):DT(A4) DC(B22):DG(A3) DA(B23):DC(A2) DT(B24):DG(A1) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 34 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 8 28 0 0 0 0 0 0 0 0 chainJ (197) THR212 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (917) MET932 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltMrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8eh9_IJ: title=CRYO-EM STRUCTURE OF HIS-ELEMENTAL PAUSED ELONGATION COMPLEX WITH A FOLDED TL AND A ROTATED RH-FL (2) organism=? DNA sequence DG(A1):DT(B24) DC(A2):DA(B23) DG(A3):DC(B22) DT(A4):DA(B21) DC(A5):DC(B20) DC(A6):DA(B19) DT(A15):DC(B18) DT(A16):DG(B17) DC(A17):DA(B16) DG(A18):DC(B15) DG(A19):DC(B14) DA(A20):DT(B13) DA(A21):DT(B12) DG(A22):DC(B11) DA(A23):DT(B10) DG(A24):DC(B9) DA(A25):DT(B8) DT(A26):DA(B7) DT(A27):DA(B6) DC(A28):DG(B5) DA(A29):DT(B4) DG(A30):DC(B3) DA(A31):DT(B2) chainI (150) ARG151 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 36 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 23 5 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (197) THR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (255) ARG270 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (772) ALA787 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (917) MET932 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtAlkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltMrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8eh9_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF HIS-ELEMENTAL PAUSED ELONGATION COMPLEX WITH A FOLDED TL AND A ROTATED RH-FL (2) organism=? DNA sequence DT(B2):DA(A31) DC(B3):DG(A30) DT(B4):DA(A29) DG(B5):DC(A28) DA(B6):DT(A27) DA(B7):DT(A26) DT(B8):DA(A25) DC(B9):DG(A24) DT(B10):DA(A23) DC(B11):DG(A22) DT(B12):DA(A21) DT(B13):DA(A20) DC(B14):DG(A19) DC(B15):DG(A18) DA(B16):DC(A17) DG(B17):DT(A16) DC(B18):DT(A15) DA(B19):DC(A6) DC(B20):DC(A5) DA(B21):DT(A4) DC(B22):DG(A3) DA(B23):DC(A2) DT(B24):DG(A1) chainJ (197) THR212 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (772) ALA787 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (917) MET932 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtAlkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltMrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8eha_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF HIS-ELEMENTAL PAUSED ELONGATION COMPLEX WITH A FOLDED TL AND A ROTATED RH-FL (OUT) organism=? DNA sequence DG(A1):DT(B24) DC(A2):DA(B23) DG(A3):DC(B22) DT(A4):DA(B21) DC(A5):DC(B20) DC(A6):DA(B19) DT(A15):DC(B18) DT(A16):DG(B17) DC(A17):DA(B16) DG(A18):DC(B15) DG(A19):DC(B14) DA(A20):DT(B13) DA(A21):DT(B12) DG(A22):DC(B11) DA(A23):DT(B10) DG(A24):DC(B9) DA(A25):DT(B8) DT(A26):DA(B7) DT(A27):DA(B6) DC(A28):DG(B5) DA(A29):DT(B4) DG(A30):DC(B3) DA(A31):DT(B2) chainI (182) TRP183 0 0 0 0 0 0 0 38 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 24 5 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >8eha_IJ: title=CRYO-EM STRUCTURE OF HIS-ELEMENTAL PAUSED ELONGATION COMPLEX WITH A FOLDED TL AND A ROTATED RH-FL (OUT) organism=? DNA sequence DT(B2):DA(A31) DC(B3):DG(A30) DT(B4):DA(A29) DG(B5):DC(A28) DA(B6):DT(A27) DA(B7):DT(A26) DT(B8):DA(A25) DC(B9):DG(A24) DT(B10):DA(A23) DC(B11):DG(A22) DT(B12):DA(A21) DT(B13):DA(A20) DC(B14):DG(A19) DC(B15):DG(A18) DA(B16):DC(A17) DG(B17):DT(A16) DC(B18):DT(A15) DA(B19):DC(A6) DC(B20):DC(A5) DA(B21):DT(A4) DC(B22):DG(A3) DA(B23):DC(A2) DT(B24):DG(A1) chainI (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 38 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 10 24 0 0 0 0 0 0 0 0 chainJ (197) THR212 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) ARG270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (306) LYS321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (917) MET932 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyRrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnKrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltMrtfhiggaasraaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8ehf_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF HIS-ELEMENTAL PAUSED ELONGATION COMPLEX WITH AN UNFOLDED TL (1) organism=? DNA sequence DT(B2):DA(A31) DC(B3):DG(A30) DT(B4):DA(A29) DG(B5):DC(A28) DA(B6):DT(A27) DA(B7):DT(A26) DT(B8):DA(A25) DC(B9):DG(A24) DT(B10):DA(A23) DC(B11):DG(A22) DT(B12):DA(A21) DT(B13):DA(A20) DC(B14):DG(A19) DC(B15):DG(A18) DA(B16):DC(A17) DG(B17):DT(A16) DC(B18):DT(A15) DA(B19):DT(A7) DC(B20):DC(A6) DA(B21):DC(A5) DC(B22):DT(A4) DA(B23):DG(A3) DT(B24):DC(A2) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreragfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >8ehf_IJ: title=CRYO-EM STRUCTURE OF HIS-ELEMENTAL PAUSED ELONGATION COMPLEX WITH AN UNFOLDED TL (1) organism=? DNA sequence DT(B2):DA(A31) DC(B3):DG(A30) DT(B4):DA(A29) DG(B5):DC(A28) DA(B6):DT(A27) DA(B7):DT(A26) DT(B8):DA(A25) DC(B9):DG(A24) DT(B10):DA(A23) DC(B11):DG(A22) DT(B12):DA(A21) DT(B13):DA(A20) DC(B14):DG(A19) DC(B15):DG(A18) DA(B16):DC(A17) DG(B17):DT(A16) DC(B18):DT(A15) DA(B19):DT(A7) DC(B20):DC(A6) DA(B21):DC(A5) DC(B22):DT(A4) DA(B23):DG(A3) DT(B24):DC(A2) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 chainJ (197) THR212 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreragfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8ehi_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF HIS-ELEMENTAL PAUSED ELONGATION COMPLEX WITH AN UNFOLDED TL (2) organism=? DNA sequence DC(A2):DT(B24) DG(A3):DA(B23) DT(A4):DC(B22) DC(A5):DA(B21) DC(A6):DC(B20) DT(A7):DA(B19) DT(A15):DC(B18) DT(A16):DG(B17) DC(A17):DA(B16) DG(A18):DC(B15) DG(A19):DC(B14) DA(A20):DT(B13) DA(A21):DT(B12) DG(A22):DC(B11) DA(A23):DT(B10) DG(A24):DC(B9) DA(A25):DT(B8) DT(A26):DA(B7) DT(A27):DA(B6) DC(A28):DG(B5) DA(A29):DT(B4) DG(A30):DC(B3) DA(A31):DT(B2) chainI (150) ARG151 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreragfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >8ehi_IJ: title=CRYO-EM STRUCTURE OF HIS-ELEMENTAL PAUSED ELONGATION COMPLEX WITH AN UNFOLDED TL (2) organism=? DNA sequence DT(B2):DA(A31) DC(B3):DG(A30) DT(B4):DA(A29) DG(B5):DC(A28) DA(B6):DT(A27) DA(B7):DT(A26) DT(B8):DA(A25) DC(B9):DG(A24) DT(B10):DA(A23) DC(B11):DG(A22) DT(B12):DA(A21) DT(B13):DA(A20) DC(B14):DG(A19) DC(B15):DG(A18) DA(B16):DC(A17) DG(B17):DT(A16) DC(B18):DT(A15) DA(B19):DT(A7) DC(B20):DC(A6) DA(B21):DC(A5) DC(B22):DT(A4) DA(B23):DG(A3) DT(B24):DC(A2) chainI (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 chainJ (259) ASN274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreragfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrviNrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8ehq_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS PAUSED TRANSCRIPTION COMPLEX WITH BACILLUS SUBTILIS NUSG organism=? DNA sequence DC(T1):DG(N40) DG(T2):DC(N39) DG(T3):DC(N38) DC(T4):DG(N37) DA(T5):DT(N36) DG(T6):DC(N35) DT(T7):DA(N34) DC(T8):DG(N33) DG(T9):DC(N32) DC(T10):DG(N31) DC(T11):DG(N30) DG(T12):DC(N29) DT(T13):DA(N28) DC(T14):DC(N27) DT(T15):DT(N26) DA(T16):DA(N25) DC(T17):DC(N24) DC(T18):DC(N23) DT(T19):DG(N22) DC(T20):DT(N21) DT(T21):DT(N20) DC(T22):DT(N19) DC(T23):DC(N18) DA(T24):DT(N17) DA(T25):DT(N16) DG(T26):DC(N15) DA(T27):DT(N14) DG(T28):DC(N13) DC(T29):DG(N12) DA(T30):DT(N11) DG(T31):DC(N10) DC(T32):DG(N9) DA(T33):DT(N8) DT(T34):DA(N7) DG(T35):DC(N6) DC(T36):DG(N5) DG(T37):DC(N4) DC(T38):DG(N3) chainC (437) GLU466 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielrege >8ehq_CDG: title=MYCOBACTERIUM TUBERCULOSIS PAUSED TRANSCRIPTION COMPLEX WITH BACILLUS SUBTILIS NUSG organism=? DNA sequence DC(T1):DG(N40) DG(T2):DC(N39) DG(T3):DC(N38) DC(T4):DG(N37) DA(T5):DT(N36) DG(T6):DC(N35) DT(T7):DA(N34) DC(T8):DG(N33) DG(T9):DC(N32) DC(T10):DG(N31) DC(T11):DG(N30) DG(T12):DC(N29) DT(T13):DA(N28) DC(T14):DC(N27) DT(T15):DT(N26) DA(T16):DA(N25) DC(T17):DC(N24) DC(T18):DC(N23) DT(T19):DG(N22) DC(T20):DT(N21) DT(T21):DT(N20) DC(T22):DT(N19) DC(T23):DC(N18) DA(T24):DT(N17) DA(T25):DT(N16) DG(T26):DC(N15) DA(T27):DT(N14) DG(T28):DC(N13) DC(T29):DG(N12) DA(T30):DT(N11) DG(T31):DC(N10) DC(T32):DG(N9) DA(T33):DT(N8) DT(T34):DA(N7) DG(T35):DC(N6) DC(T36):DG(N5) DG(T37):DC(N4) DC(T38):DG(N3) chainC (437) GLU466 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (329) LEU330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) PRO394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (500) ALA501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (866) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (867) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 9) TYR11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASP73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) TRP76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) TYR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ASN81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) THR86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) LYS97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielrege/ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLdggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvtgPgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrtditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/knwyvvhtYsgyenkvkanlekrvesmgmqdkifrvvvpeeeetdikngkkkvvkkkvfpgyvlveivmtDdsWYvvRNtpgvTgfvgsagsgsKptpllpgeaetilkr >8ej3_CDG: title=M. TUBERCULOSIS RNAP PAUSE ESCAPED COMPLEX WITH BACILLUS SUBTILIS NUSG AND GMPCPP organism=? DNA sequence DC(T1):DG(N40) DG(T2):DC(N39) DG(T3):DC(N38) DC(T4):DG(N37) DA(T5):DT(N36) DG(T6):DC(N35) DT(T7):DA(N34) DC(T8):DG(N33) DG(T9):DC(N32) DC(T10):DG(N31) DC(T11):DG(N30) DG(T12):DC(N29) DT(T13):DA(N28) DC(T14):DC(N24) DT(T15):DC(N23) DA(T16):DG(N22) DC(T17):DT(N21) DC(T18):DT(N20) DT(T19):DT(N19) DC(T20):DC(N18) DT(T21):DT(N17) DC(T22):DT(N16) DC(T23):DC(N15) DA(T24):DT(N14) DA(T25):DC(N13) DG(T26):DG(N12) DA(T27):DT(N11) DG(T28):DC(N10) DC(T29):DG(N9) chainC (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 16 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) GLU466 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (329) LEU330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (344) ARG345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (388) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (500) ALA501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (866) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (867) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 74) TRP76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 78) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 ( 84) THR86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrEraglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgrevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregededleraaanlginlsrn/ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLdggrfatsdlndlyRrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrtfhqggvgeditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/knwyvvhtysgyenkvkanlekrvesmgmqdkifrvvvpeeeetdikngkkkvvkkkvfpgyvlveivmtddsWyvvRntpgvTgfvgsagsgskptpllpgeaetilkr >8ej3_G:N-utilization_substance_G_protein_NusG,_N-terminal_domain; title=M. TUBERCULOSIS RNAP PAUSE ESCAPED COMPLEX WITH BACILLUS SUBTILIS NUSG AND GMPCPP organism=? DNA sequence DG(N9):DC(T29) DC(N10):DG(T28) DT(N11):DA(T27) DG(N12):DG(T26) DC(N13):DA(T25) DT(N14):DA(T24) DC(N15):DC(T23) DT(N16):DC(T22) DT(N17):DT(T21) DC(N18):DC(T20) DT(N19):DT(T19) DT(N20):DC(T18) DT(N21):DC(T17) DG(N22):DA(T16) DC(N23):DT(T15) DC(N24):DC(T14) DA(N28):DT(T13) DC(N29):DG(T12) DG(N30):DC(T11) DG(N31):DC(T10) DC(N32):DG(T9) DG(N33):DC(T8) DA(N34):DT(T7) DC(N35):DG(T6) DT(N36):DA(T5) DG(N37):DC(T4) DC(N38):DG(T3) DC(N39):DG(T2) DG(N40):DC(T1) chainG ( 74) TRP76 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG80 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) THR86 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence knwyvvhtysgyenkvkanlekrvesmgmqdkifrvvvpeeeetdikngkkkvvkkkvfpgyvlveivmtddsWyvvRntpgvTgfvgsagsgskptpllpgeaetilkr >8ej6_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAGAGGAATGGGG) organism=Homo sapiens DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DG(C6):DC(D28) DA(C7):DT(D27) DG(C8):DC(D26) DG(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DT(C12):DA(D22) DG(C13):DC(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLN226 0 0 0 0 2 1 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 15 16 10 0 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) ARG233 0 0 0 0 11 8 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8ej8_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) Q226E MUTANT BOUND TO D(AATAAAAGGAAGTGGG) organism=Homo sapiens DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DA(C6):DT(D28) DA(C7):DT(D27) DG(C8):DC(D26) DG(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DG(C12):DC(D22) DT(C13):DA(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLU226 0 0 0 0 3 1 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 17 16 9 1 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) ARG233 0 0 0 0 11 8 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 1 2 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyEKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8ejo_AB: title=CRYSTAL STRUCTURE OF THE HOMEODOMAIN OF PLATYPUS SDUX IN COMPLEX WITH DNA organism=Ornithorhynchus anatinus DNA sequence DG(C1):DC(D17) DC(C2):DG(D16) DG(C3):DC(D15) DT(C4):DA(D14) DA(C5):DT(D13) DA(C6):DT(D12) DT(C7):DA(D11) DC(C8):DG(D10) DT(C9):DA(D9) DA(C10):DT(D8) DA(C11):DT(D7) DT(C12):DA(D6) DC(C13):DG(D5) DA(C14):DT(D4) DA(C15):DT(D3) DC(C16):DG(D2) DA(C17):DT(D1) chainA ( 2) ARG22 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG25 0 1 13 5 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) VAL67 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 50) GLN70 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 51) ASN71 0 0 0 0 6 10 1 0 0 0 0 0 0 0 0 0 0 chainB ( 2) ARG22 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 ( 5) ARG25 0 0 0 0 0 0 0 0 0 0 0 0 5 5 10 0 0 ( 47) VAL67 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 ( 50) GLN70 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 ( 51) ASN71 0 0 0 0 0 0 0 0 0 0 1 8 6 0 0 0 0 ( 55) ARG75 0 0 0 0 0 0 0 0 0 0 0 2 10 15 0 0 0 prot.sequence aRrkRttfnktqleilvksfnkdpypgigvrehlasliqipesriqVwfQNrrarq/aRrkRttfnktqleilvksfnkdpypgigvrehlasliqipesriqVwfQNrraRq >8ejo_B:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE HOMEODOMAIN OF PLATYPUS SDUX IN COMPLEX WITH DNA organism=Ornithorhynchus anatinus DNA sequence DG(C1):DC(D17) DC(C2):DG(D16) DG(C3):DC(D15) DT(C4):DA(D14) DA(C5):DT(D13) DA(C6):DT(D12) DT(C7):DA(D11) DC(C8):DG(D10) DT(C9):DA(D9) DA(C10):DT(D8) DA(C11):DT(D7) DT(C12):DA(D6) DC(C13):DG(D5) DA(C14):DT(D4) DA(C15):DT(D3) DC(C16):DG(D2) DA(C17):DT(D1) chainB ( 2) ARG22 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 ( 5) ARG25 0 0 0 0 0 0 0 0 0 0 0 0 5 5 10 0 0 ( 47) VAL67 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 ( 50) GLN70 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 ( 51) ASN71 0 0 0 0 0 0 0 0 0 0 1 8 6 0 0 0 0 ( 55) ARG75 0 0 0 0 0 0 0 0 0 0 0 2 10 15 0 0 0 prot.sequence aRrkRttfnktqleilvksfnkdpypgigvrehlasliqipesriqVwfQNrraRq >8ejp_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF THE HOMEODOMAIN OF PLATYPUS SDUX IN COMPLEX WITH DNA CONTAINING 5-BROMOURACIL organism=Ornithorhynchus anatinus DNA sequence DG(C1):DC(D17) DC(C2):DG(D16) DG(C3):DC(D15) DT(C4):DA(D14) DA(C5):DT(D13) DA(C6):DT(D12) DT(C7):DA(D11) DC(C8):DG(D10) DT(C9):DA(D9) DA(C10):DT(D8) DA(C11):DT(D7) DT(C12):DA(D6) DC(C13):DG(D5) DA(C14):DT(D4) DA(C15):BRU(D3) DC(C16):DG(D2) DA(C17):DT(D1) chainA ( 2) ARG22 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG25 0 1 12 5 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) VAL67 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 50) GLN70 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 ( 51) ASN71 0 0 0 0 6 9 1 0 0 0 0 0 0 0 0 0 0 prot.sequence aRrkRttfnktqleilvksfnkdpypgigvrehlasliqipesriqVwfQNrrarq >8ejp_AB: title=CRYSTAL STRUCTURE OF THE HOMEODOMAIN OF PLATYPUS SDUX IN COMPLEX WITH DNA CONTAINING 5-BROMOURACIL organism=Ornithorhynchus anatinus DNA sequence DT(D1):DA(C17) DG(D2):DC(C16) BRU(D3):DA(C15) DT(D4):DA(C14) DG(D5):DC(C13) DA(D6):DT(C12) DT(D7):DA(C11) DT(D8):DA(C10) DA(D9):DT(C9) DG(D10):DC(C8) DA(D11):DT(C7) DT(D12):DA(C6) DT(D13):DA(C5) DA(D14):DT(C4) DC(D15):DG(C3) DG(D16):DC(C2) DC(D17):DG(C1) chainA ( 2) ARG22 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 ( 5) ARG25 0 0 0 0 0 0 0 0 0 0 0 0 2 5 12 1 0 ( 47) VAL67 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 ( 50) GLN70 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 ( 51) ASN71 0 0 0 0 0 0 0 0 0 0 1 9 6 0 0 0 0 chainB ( 2) ARG22 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG25 0 0 9 5 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) VAL67 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 ( 50) GLN70 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 ( 51) ASN71 0 0 0 0 6 8 1 0 0 0 0 0 0 0 0 0 0 ( 55) ARG75 0 0 0 11 10 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRrkRttfnktqleilvksfnkdpypgigvrehlasliqipesriqVwfQNrrarq/aRrkRttfnktqleilvksfnkdpypgigvrehlasliqipesriqVwfQNrraRq >8ek3_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) Q226E MUTANT BOUND TO D(AATAAGCGGAATGGGG) organism=Homo sapiens DNA sequence DC(D18):DG(C16) DC(D19):DG(C15) DC(D20):DG(C14) DC(D21):DG(C13) DA(D22):DT(C12) DT(D23):DA(C11) DT(D24):DA(C10) DC(D25):DG(C9) DC(D26):DG(C8) DG(D27):DC(C7) DC(D28):DG(C6) DT(D29):DA(C5) DT(D30):DA(C4) DA(D31):DT(C3) chainF ( 58) GLU226 0 0 0 0 0 0 0 0 3 3 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 0 10 16 17 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 0 0 0 0 8 10 0 0 0 0 ( 66) ASN234 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyEKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8ek8_E:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAAAGGAGAAGGG) organism=Homo sapiens DNA sequence DA(C0):DT(D34) DT(C1):DA(D33) DA(C2):DT(D32) DA(C3):DT(D31) DA(C4):DT(D30) DA(C5):DT(D29) DG(C6):DC(D28) DG(C7):DC(D27) DA(C8):DT(D26) DG(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DG(C12):DC(D22) DG(C13):DC(D21) DG(C14):DC(D20) DC(B20):DG(A14) DC(B21):DG(A13) DC(B22):DG(A12) DT(B23):DA(A11) DT(B24):DA(A10) DC(B25):DG(A9) DT(B26):DA(A8) DC(B27):DG(A7) DC(B28):DG(A6) DT(B29):DA(A5) DT(B30):DA(A4) DT(B31):DA(A3) DT(B32):DA(A2) DA(B33):DT(A1) DT(B34):DA(A0) chainE ( 58) GLN226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 15 13 0 0 0 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlg >8ek8_EF:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAAAGGAGAAGGG) organism=Homo sapiens DNA sequence DA(A0):DT(B34) DT(A1):DA(B33) DA(A2):DT(B32) DA(A3):DT(B31) DA(A4):DT(B30) DA(A5):DT(B29) DG(A6):DC(B28) DG(A7):DC(B27) DA(A8):DT(B26) DG(A9):DC(B25) DA(A10):DT(B24) DA(A11):DT(B23) DG(A12):DC(B22) DG(A13):DC(B21) DG(A14):DC(B20) DC(D20):DG(C14) DC(D21):DG(C13) DC(D22):DG(C12) DT(D23):DA(C11) DT(D24):DA(C10) DC(D25):DG(C9) DT(D26):DA(C8) DC(D27):DG(C7) DC(D28):DG(C6) DT(D29):DA(C5) DT(D30):DA(C4) DT(D31):DA(C3) DT(D32):DA(C2) DA(D33):DT(C1) DT(D34):DA(C0) chainF ( 59) LYS227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 15 13 0 0 0 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 14 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 chainE ( 58) GLN226 0 0 0 0 0 0 8 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 0 0 0 13 15 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 0 0 0 13 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlg/kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyqKmaRAlRNygktgevkkvkkkltyqfsgevlg >8ekj_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAATGGAAGTGGG) organism=Homo sapiens DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DA(C6):DT(D28) DT(C7):DA(D27) DG(C8):DC(D26) DG(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DG(C12):DC(D22) DT(C13):DA(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLN226 0 0 0 1 2 3 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 13 15 10 0 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) ARG233 0 0 0 0 5 5 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 1 2 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8eku_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAATGGAATGGGG) organism=Homo sapiens DNA sequence DC(D18):DG(C16) DC(D19):DG(C15) DC(D20):DG(C14) DC(D21):DG(C13) DA(D22):DT(C12) DT(D23):DA(C11) DT(D24):DA(C10) DC(D25):DG(C9) DC(D26):DG(C8) DA(D27):DT(C7) DT(D28):DA(C6) DT(D29):DA(C5) DT(D30):DA(C4) DA(D31):DT(C3) chainF ( 58) GLN226 0 0 0 0 0 0 0 0 3 2 1 0 0 0 ( 59) LYS227 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 0 10 15 13 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 0 0 0 0 5 5 0 0 0 0 ( 66) ASN234 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8ekv_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAGCGGATGTGGG) organism=Homo sapiens DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DG(C6):DC(D28) DC(C7):DG(D27) DG(C8):DC(D26) DG(C9):DC(D25) DA(C10):DT(D24) DT(C11):DA(D23) DG(C12):DC(D22) DT(C13):DA(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLN226 0 0 0 0 2 4 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 20 18 9 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 12 9 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRalRNygktgevkkvkkkltyqfsgevlgr >8ekz_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAGGAGAAGTAGG) organism=Homo sapiens DNA sequence DC(D18):DG(C16) DC(D19):DG(C15) DT(D20):DA(C14) DA(D21):DT(C13) DC(D22):DG(C12) DT(D23):DA(C11) DT(D24):DA(C10) DC(D25):DG(C9) DT(D26):DA(C8) DC(D27):DG(C7) DC(D28):DG(C6) DT(D29):DA(C5) DT(D30):DA(C4) DA(D31):DT(C3) chainF ( 59) LYS227 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 1 9 15 14 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 0 0 0 0 8 11 0 0 0 0 ( 66) ASN234 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyqKmaRAlRNygktgevkkvkkkltyqfsgevlg >8em9_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAGGAGAAGTAGGG) organism=Homo sapiens DNA sequence DT(C4):DA(D32) DA(C5):DT(D31) DG(C6):DC(D30) DG(C7):DC(D29) DA(C8):DT(D28) DG(C9):DC(D27) DA(C10):DT(D26) DA(C11):DT(D25) DG(C12):DC(D24) DT(C13):DA(D23) DA(C14):DT(D22) DG(C15):DC(D21) DG(C16):DC(D20) DG(C17):DC(D19) chainF ( 59) LYS227 0 0 0 0 0 0 4 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 13 17 12 1 0 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 65) ARG233 0 0 0 10 8 0 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 1 2 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyqKmaRAlRNygktgevkkvkkkltyqfsgevlg >8emd_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) Q226E MUTANT BOUND TO D(AATAAGCGGAAGTGGG) organism=Homo sapiens DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DG(C6):DC(D28) DC(C7):DG(D27) DG(C8):DC(D26) DG(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DG(C12):DC(D22) DT(C13):DA(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLU226 0 0 0 1 6 2 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 17 16 9 0 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) ARG233 0 0 0 0 11 8 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 1 1 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyEKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8emh_J:Ribosomal_protein_S5_domain_2-like;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYOEM CHARACTERIZATION OF A UNIQUE AAA+ BRXL PHAGE RESTRICTION FACTOR organism=? DNA sequence DC(O13):DG(P63) DG(O14):DC(P62) DC(O15):DG(P61) DG(O16):DC(P60) DC(O17):DG(P59) DT(O18):DA(P58) DA(O19):DT(P57) DC(O20):DG(P56) DA(O21):DT(P55) DC(O22):DG(P54) DT(O23):DA(P53) DA(O24):DT(P52) DA(O25):DT(P51) DA(O26):DT(P50) DG(O28):DC(P49) DG(O29):DC(P48) DG(O30):DC(P47) DC(O31):DG(P46) DC(O32):DG(P45) DC(O33):DG(P44) DT(O34):DA(P43) DT(O35):DA(P42) DA(O36):DT(P41) DA(O37):DT(P40) DT(O38):DA(P39) DT(O39):DA(P38) DC(O40):DG(P37) DG(O41):DC(P36) DA(O42):DT(P35) DT(O43):DA(P34) DC(O44):DG(P33) DG(O45):DC(P32) DA(O46):DT(P31) DC(O47):DG(P30) DT(O48):DA(P29) DA(O49):DT(P28) DA(O50):DT(P27) DG(O51):DC(P26) DA(O52):DT(P25) DA(O53):DT(P24) DA(O54):DT(P23) DG(O55):DC(P22) DG(O56):DC(P21) DG(O57):DC(P20) DC(O58):DG(P18) DC(O59):DG(P17) DT(O61):DG(P16) DT(O62):DA(P15) DT(O63):DA(P13) DA(O64):DT(P12) DT(O65):DA(P11) DC(O66):DG(P10) DG(O67):DC(P9) DA(O68):DT(P8) DT(O69):DA(P7) DC(O70):DG(P6) DG(O71):DC(P5) DA(O72):DT(P4) DC(O73):DG(P3) DT(O74):DA(P2) DG(O75):DC(P1) chainJ (260) SER263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) LYS287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence andkeldqllnehfagrvvrkdltklikeganvpvyvleyllgmycasddpeiieqglrnvktvlaenyvrpdeaekvkslvrergsykvidrvtvklnerkdkyeasfsnlgikdaeisagivkeyekllvggiwviatlsyyfeegqtsspfgvsllkpiqmpnmnmdelfsgraalstdqwreslirsigmepaslkedvqwhllarmvpfvennynvcelgprgtgkshiykecspnsilvsggqttvanlfynmSsrriglvglwdvvafdqvagisfKdkdgvqimkdymasgsfargreqmeasasmvfvgninqsveslvktshllapfpeamidsaffdrfhayipgweipkmrpefftnryglivdylaeffremrkrsfadsiekyfklgnnlnqrdviavrktvsglmkllyphgqfnkedvrqcleyalqvrrrvkeqlkkiggmefydvhfsyidndtleehfvsvkeqlipegpakpgflytiglsnkgmpglyrlelqvtkgsgklatsglwnsssakeqvkiafdyfkanasrisggskvmehdfhlhvvelqntgplshlalpslvafasgllgrsvqsqmvvlgdmslggsvtpvesiaeclqvafdagakkvalpmssaadiptipvelftkfqtsfyadpvdavfkglg >8eml_A:Homeodomain-like; title=CRYSTAL STRUCTURE OF GSX2 HOMEODOMAIN IN COMPLEX WITH DNA organism=Mus musculus DNA sequence DG(C2):DC(D15) DA(C3):DT(D14) DG(C4):DC(D13) DC(C5):DG(D12) DT(C6):DA(D11) DA(C7):DT(D10) DA(C8):DT(D9) DT(C9):DA(D8) DT(C10):DA(D7) DA(C11):DT(D6) DA(C12):DT(D5) DA(C13):DT(D4) DG(C14):DC(D3) DC(C15):DG(D2) chainA ( 3) ARG207 0 0 0 0 0 0 0 0 5 6 14 0 0 0 ( 45) ILE249 0 0 0 0 0 0 2 2 0 0 0 0 0 0 ( 48) GLN252 0 0 0 0 4 0 0 0 0 0 0 0 0 0 ( 49) ASN253 0 0 0 0 0 0 0 10 7 0 0 0 0 0 prot.sequence rmRtaftstqllelerefssnmylsrlrrieiatylnlsekqvkIwfQNrrvkhkkeg >8eng_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAGCGGAAGTGGG) WITH HEMI-METHYLATED CPG (FORWARD STRAND) organism=Homo sapiens DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DG(C6):DC(D28) 5CM(C7):DG(D27) DG(C8):DC(D26) DG(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DG(C12):DC(D22) DT(C13):DA(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLN226 0 0 0 0 2 3 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 13 15 10 0 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) ARG233 0 0 0 0 4 5 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 1 2 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgrgg >8eo1_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAGCGGAAGTGGG) WITH HEMI-METHYLATED CPG (REVERSE STRAND) organism=Homo sapiens DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DG(C6):DC(D28) DC(C7):DG(D27) DG(C8):5CM(D26) DG(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DG(C12):DC(D22) DT(C13):DA(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLN226 0 0 0 0 2 4 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 17 16 9 1 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) ARG233 0 0 0 0 11 8 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 1 1 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8eo4_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAGCGGAAGTGGG) WITH DI- METHYLATED CPG SITES organism=Homo sapiens DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DG(C6):DC(D28) 5CM(C7):DG(D27) DG(C8):5CM(D26) DG(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DG(C12):DC(D22) DT(C13):DA(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLN226 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 13 15 10 0 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) ARG233 0 0 0 0 4 5 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 1 2 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgrggla >8eoe_CD: title=MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION ELONGATION COMPLEX WITH BACILLUS SUBTILIS NUSG (EC_LG) organism=? DNA sequence DC(T4):DG(N40) DA(T5):DC(N39) DG(T6):DC(N38) DT(T7):DG(N37) DC(T8):DT(N36) DG(T9):DC(N35) DC(T10):DA(N34) DC(T11):DG(N33) DG(T12):DC(N32) DT(T13):DG(N31) DC(T14):DG(N30) DT(T15):DC(N29) DA(T16):DA(N28) DC(T17):DC(N24) DC(T18):DC(N23) DT(T19):DG(N22) DC(T20):DA(N21) DT(T21):DA(N20) DC(T22):DA(N19) DC(T23):DC(N18) DA(T24):DT(N17) DA(T25):DT(N16) DG(T26):DC(N15) DA(T27):DT(N14) DG(T28):DC(N13) DC(T29):DG(N12) DA(T30):DT(N11) DG(T31):DC(N10) DC(T32):DG(N9) DA(T33):DT(N8) DT(T34):DA(N7) DG(T35):DC(N6) DC(T36):DG(N5) DG(T37):DC(N4) DC(T38):DG(N3) chainC (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) GLU466 0 0 0 0 0 0 0 0 0 8 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (329) LEU330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (330) ASP331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (335) ALA336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) ARG372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) ARG427 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (500) ALA501 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) PRO502 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (866) THR867 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (867) ALA868 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrEraglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgearevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielrege/ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLDggrfAtsdlndlyrrvinrnnrlkrlidlgapeiivnnekRmlqesvdalfdngrrgRpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmtgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa >8eoe_G:N-utilization_substance_G_protein_NusG,_N-terminal_domain; title=MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION ELONGATION COMPLEX WITH BACILLUS SUBTILIS NUSG (EC_LG) organism=? DNA sequence DG(N3) DC(N4) DG(N5) DC(N6) DA(N7) DT(N8) DG(N9) DC(N10) DT(N11) DG(N12) DC(N13) DT(N14) DC(N15) DT(N16) DT(N17) DC(N18) DA(N19) DA(N20) DA(N21) DG(N22) DC(N23) DC(N24) DA(N28) DC(N29) DG(N30) DG(N31) DC(N32) DG(N33) DA(N34) DC(N35) DT(N36) DG(N37) DC(N38) DC(N39) DG(N40) chainG ( 78) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) THR86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence knwyvvhtysgyenkvkanlekrvesmgmqdkifrvvvpeeeetdikngkkkvvkkkvfpgyvlveivmtddswyvvRntpgvTgfvgsagsgskptpllpgeaetilkr >8eof_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION ELONGATION COMPLEX WITH BACILLUS SUBTILIS NUSG (EC_PG) organism=? DNA sequence DC(T4):DG(N40) DA(T5):DC(N39) DG(T6):DC(N38) DT(T7):DG(N37) DC(T8):DT(N36) DG(T9):DC(N35) DC(T10):DA(N34) DC(T11):DG(N33) DG(T12):DC(N32) DT(T13):DG(N31) DC(T14):DG(N30) DT(T15):DC(N29) DA(T16):DA(N28) DC(T17):DC(N24) DC(T18):DC(N23) DT(T19):DG(N22) DC(T20):DA(N21) DT(T21):DA(N20) DC(T22):DA(N19) DC(T23):DC(N18) DA(T24):DT(N17) DA(T25):DT(N16) DG(T26):DC(N15) DA(T27):DT(N14) DG(T28):DC(N13) DC(T29):DG(N12) DA(T30):DT(N11) DG(T31):DC(N10) DC(T32):DG(N9) DA(T33):DT(N8) DT(T34):DA(N7) DG(T35):DC(N6) DC(T36):DG(N5) DG(T37):DC(N4) DC(T38):DG(N3) chainC (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) GLU466 0 0 0 0 0 0 0 0 0 14 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgearevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielrege >8eof_CDG: title=MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION ELONGATION COMPLEX WITH BACILLUS SUBTILIS NUSG (EC_PG) organism=? DNA sequence DC(T4):DG(N40) DA(T5):DC(N39) DG(T6):DC(N38) DT(T7):DG(N37) DC(T8):DT(N36) DG(T9):DC(N35) DC(T10):DA(N34) DC(T11):DG(N33) DG(T12):DC(N32) DT(T13):DG(N31) DC(T14):DG(N30) DT(T15):DC(N29) DA(T16):DA(N28) DC(T17):DC(N24) DC(T18):DC(N23) DT(T19):DG(N22) DC(T20):DA(N21) DT(T21):DA(N20) DC(T22):DA(N19) DC(T23):DC(N18) DA(T24):DT(N17) DA(T25):DT(N16) DG(T26):DC(N15) DA(T27):DT(N14) DG(T28):DC(N13) DC(T29):DG(N12) DA(T30):DT(N11) DG(T31):DC(N10) DC(T32):DG(N9) DA(T33):DT(N8) DT(T34):DA(N7) DG(T35):DC(N6) DC(T36):DG(N5) DG(T37):DC(N4) DC(T38):DG(N3) chainC (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) GLU466 0 0 0 0 0 0 0 0 0 14 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (329) LEU330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) ARG372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 17 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (500) ALA501 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) PRO502 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (866) THR867 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (867) ALA868 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 78) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) THR86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgearevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielrege/ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLdggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekRmlqesvdalfdngrrgRpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrtgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/knwyvvhtysgyenkvkanlekrvesmgmqdkifrvvvpeeeetdikngkkkvvkkkvfpgyvlveivmtddswyvvRntpgvTgfvgsagsgskptpllpgeaetilkr >8eos_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=M. TUBERCULOSIS RNAP ELONGATION COMPLEX WITH NUSG AND CMPCPP organism=? DNA sequence DC(T1):DG(N40) DG(T2):DC(N39) DG(T3):DC(N38) DC(T4):DG(N37) DA(T5):DT(N36) DG(T6):DC(N35) DT(T7):DA(N34) DC(T8):DG(N33) DG(T9):DC(N32) DC(T10):DG(N31) DC(T11):DG(N30) DG(T14):DC(N29) DT(T15):DA(N28) DA(T16):DG(N27) DC(T17):DT(N26) DC(T18):DC(N23) DT(T19):DG(N22) DC(T20):DA(N21) DT(T21):DA(N20) DC(T22):DA(N19) DC(T23):DC(N18) DA(T24):DT(N17) DT(T25):DA(N16) DG(T26):DC(N15) DA(T27):DT(N14) DG(T28):DC(N13) DC(T29):DG(N12) DA(T30):DT(N11) DG(T31):DC(N10) DC(T32):DG(N9) DA(T33):DT(N8) DT(T34):DA(N7) DG(T35):DC(N6) DC(T36):DG(N5) DG(T37):DC(N4) DC(T38):DG(N3) chainC (152) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ILE370 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) ASP371 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG376 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU463 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) VAL472 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddIDhfgnRrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpggLsreRagleVrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgearevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregededleraaanlginlsrn >8eos_CDG: title=M. TUBERCULOSIS RNAP ELONGATION COMPLEX WITH NUSG AND CMPCPP organism=? DNA sequence DC(T1):DG(N40) DG(T2):DC(N39) DG(T3):DC(N38) DC(T4):DG(N37) DA(T5):DT(N36) DG(T6):DC(N35) DT(T7):DA(N34) DC(T8):DG(N33) DG(T9):DC(N32) DC(T10):DG(N31) DC(T11):DG(N30) DG(T14):DC(N29) DT(T15):DA(N28) DA(T16):DG(N27) DC(T17):DT(N26) DC(T18):DC(N23) DT(T19):DG(N22) DC(T20):DA(N21) DT(T21):DA(N20) DC(T22):DA(N19) DC(T23):DC(N18) DA(T24):DT(N17) DT(T25):DA(N16) DG(T26):DC(N15) DA(T27):DT(N14) DG(T28):DC(N13) DC(T29):DG(N12) DA(T30):DT(N11) DG(T31):DC(N10) DC(T32):DG(N9) DA(T33):DT(N8) DT(T34):DA(N7) DG(T35):DC(N6) DC(T36):DG(N5) DG(T37):DC(N4) DC(T38):DG(N3) chainC (152) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ILE370 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) ASP371 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG376 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU463 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (443) VAL472 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (329) LEU330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (333) ARG334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) ARG345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) ARG372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) MET373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) ARG427 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) PRO502 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (866) THR867 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (867) ALA868 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1011) MET1012 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 22) HIS53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) THR130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddIDhfgnRrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpggLsreRagleVrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgearevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregededleraaanlginlsrn/ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLdggRfatsdlndlyRrvinrnnrlkrlidlgapeiivnnekRMlqesvdalfdngrrgRpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltMrtfhqditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/vdpaaalkaelrskpgdwyvvHsyagyenkvkanletrvqnldvgdyifqvevpteevteikngqrkqvnrkvlpgyilvrmdltddswaavrntpgvTgfvgatsrpsalalddvvkfllprg >8eot_CDG: title=M. TUBERCULOSIS RNAP ELONGATION COMPLEX WITH NUSG organism=? DNA sequence DT(N8):DA(T33) DG(N9):DC(T32) DC(N10):DG(T31) DT(N11):DA(T30) DG(N12):DC(T29) DC(N13):DG(T28) DT(N14):DA(T27) DC(N15):DG(T26) DA(N16):DT(T25) DT(N17):DA(T24) DC(N18):DT(T21) DA(N19):DC(T20) DA(N20):DT(T19) DA(N21):DC(T18) DG(N22):DC(T17) DC(N23):DA(T16) DT(N26):DT(T15) DG(N27):DG(T14) DA(N28):DT(T13) DC(N29):DG(T12) DG(N30):DC(T11) DG(N31):DC(T10) DC(N32):DG(T9) DG(N33):DC(T8) DA(N34):DT(T7) DC(N35):DG(T6) DT(N36):DA(T5) DG(N37):DC(T4) DC(N38):DG(T3) DC(N39):DG(T2) DG(N40):DC(T1) chainD (371) ARG372 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) MET373 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) ARG427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (866) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (867) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 22) HIS53 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (152) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) ILE370 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (342) ASP371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (347) ARG376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LEU463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 (443) VAL472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvkvipsrgaWlefdvdkrdtvgvridRkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddIDhfgnRrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpggLsreRagleVrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielregededleraaanlginlsrn/ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekRMlqesvdalfdngrrgRpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnraPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmtgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/vdpaaalkaelrskpgdwyvvHsyagyenkvkanletrvqnldvgdyifqvevpteevteikngqrkqvnrkvlpgyilvrmdltddswaavrntpgvtgfvgatsrpsalalddvvkfllprg >8eot_G:N-utilization_substance_G_protein_NusG,_N-terminal_domain; title=M. TUBERCULOSIS RNAP ELONGATION COMPLEX WITH NUSG organism=? DNA sequence DC(T1):DG(N40) DG(T2):DC(N39) DG(T3):DC(N38) DC(T4):DG(N37) DA(T5):DT(N36) DG(T6):DC(N35) DT(T7):DA(N34) DC(T8):DG(N33) DG(T9):DC(N32) DC(T10):DG(N31) DC(T11):DG(N30) DG(T14):DC(N29) DT(T15):DA(N28) DA(T16):DG(N27) DC(T17):DT(N26) DC(T18):DC(N23) DT(T19):DG(N22) DC(T20):DA(N21) DT(T21):DA(N20) DC(T22):DA(N19) DC(T23):DC(N18) DA(T24):DT(N17) DT(T25):DA(N16) DG(T26):DC(N15) DA(T27):DT(N14) DG(T28):DC(N13) DC(T29):DG(N12) DA(T30):DT(N11) DG(T31):DC(N10) DC(T32):DG(N9) DA(T33):DT(N8) chainG ( 22) HIS53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence vdpaaalkaelrskpgdwyvvHsyagyenkvkanletrvqnldvgdyifqvevpteevteikngqrkqvnrkvlpgyilvrmdltddswaavrntpgvtgfvgatsrpsalalddvvkfllprg >8epx_D: title=TYPE IIS RESTRICTION ENDONUCLEASE PAQCI, DNA BOUND organism=? DNA sequence DC(K6):DG(L45) DC(K7):DG(L44) DT(K8):DA(L43) DC(K9):DG(L42) DG(K10):DC(L41) DC(K11):DG(L40) DG(K12):DC(L39) DT(K13):DA(L38) DG(K14):DC(L37) DG(K15):DC(L36) DC(K16):DG(L35) DG(K17):DC(L34) DC(K18):DG(L33) DA(K19):DT(L32) DG(K20):DC(L31) DG(K21):DC(L30) DT(K22):DA(L29) DG(K23):DC(L28) DG(K24):DC(L27) DG(K25):DC(L26) DA(K26):DT(L25) DA(K27):DT(L24) DG(K28):DC(L23) chainD ( 81) HIS82 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) HIS181 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 (179) ARG183 0 0 0 0 0 0 0 0 0 0 0 0 0 13 17 0 0 0 0 0 0 0 0 (180) GLU184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 (291) ARG295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 5 0 0 0 0 0 (331) GLN335 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 (336) ARG340 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 (338) HIS342 0 0 0 0 0 0 0 0 0 0 8 5 2 0 0 0 0 0 0 0 0 0 0 (339) SER343 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 (342) GLU346 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 (343) ASP347 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 (458) ARG462 0 0 0 0 0 0 0 0 0 0 0 0 3 6 6 0 0 0 0 0 0 0 0 (462) ARG466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 13 6 0 0 0 0 (464) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 14 0 0 0 0 0 0 0 (468) GLN472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 0 0 0 prot.sequence pydhnaeadfaasevarmlvadpglcydaaslpasisasasyepsaagwpkadglvsvleggtstqraialeykrpqegiHglltaigqahgylhkgysgaaivipgrysshptpaeyvrdvlnaisgsraiavfsysppdttsptpfagriqcvrplvfdvhlrpanqgpktqwvHmREgsttrdaffrflqvakrlsadptaprptlrselvaaigrlapgrdpieyitntadnkfltkvwqffwlewlatpavltpwkleagvysapgartrilredgtdfsqlwegRvnslketiagmlnrgeiseaqgweafvggisatgggqdkQgvraRaHSyrEDidsalaqlrwieddglptdqgyrfmticeryggansraaidymgatliqtgryasflhyinrlserkfaenplaytkpgpggmpvfteesyweylqdletkltdelrvmrkvsgRarpRvRttfQveltllrnygfvsstrhrlgvgipidweqvvqalnvdl >8eqg_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAAA(DU)GGAAGTGGG) organism=Homo sapiens DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DA(C6):DT(D28) DU(C7):DA(D27) DG(C8):DC(D26) DG(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DG(C12):DC(D22) DT(C13):DA(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLN226 0 0 0 1 4 3 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 14 15 9 1 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) ARG233 0 0 0 0 13 8 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 1 2 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8eqk_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) BOUND TO D(AATAACCGGAAGTGGG) organism=Homo sapiens DNA sequence DC(D18):DG(C16) DC(D19):DG(C15) DC(D20):DG(C14) DA(D21):DT(C13) DC(D22):DG(C12) DT(D23):DA(C11) DT(D24):DA(C10) DC(D25):DG(C9) DC(D26):DG(C8) DG(D27):DC(C7) DG(D28):DC(C6) DT(D29):DA(C5) DT(D30):DA(C4) DA(D31):DT(C3) chainF ( 58) GLN226 0 0 0 0 0 0 0 0 2 4 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 0 10 15 12 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 0 0 0 0 7 15 0 0 0 0 ( 66) ASN234 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8eql_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) Q226E MUTANT BOUND TO D(AATAACCGGAAGTGGG) organism=Homo sapiens DNA sequence DC(D18):DG(C16) DC(D19):DG(C15) DC(D20):DG(C14) DA(D21):DT(C13) DC(D22):DG(C12) DT(D23):DA(C11) DT(D24):DA(C10) DC(D25):DG(C9) DC(D26):DG(C8) DG(D27):DC(C7) DG(D28):DC(C6) DT(D29):DA(C5) DT(D30):DA(C4) DA(D31):DT(C3) chainF ( 58) GLU226 0 0 0 0 0 0 0 0 0 5 9 0 0 0 ( 59) LYS227 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 0 9 15 16 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 0 0 0 0 8 10 0 0 0 0 ( 66) ASN234 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyEKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8ett_ABCDEF:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CLASS1 OF THE INO80-HEXASOME COMPLEX organism=? DNA sequence DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J14):DA(I-13) DT(J15):DA(I-14) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DC(J70):DG(I-70) DC(J71):DG(I-71) DA(J72):DT(I-72) chainA chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainF ( 55) ARG78 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence llirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqg/ktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ksrkesyaiyvykvlkqvhpdtgisskAmsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera/dniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakRktvtamdvvyalkrqgrtlygfgg >8ett_B:Histone-fold; title=CLASS1 OF THE INO80-HEXASOME COMPLEX organism=? DNA sequence DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J14):DA(I-13) DT(J15):DA(I-14) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DC(J70):DG(I-70) DC(J71):DG(I-71) DA(J72):DT(I-72) chainB ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqg >8etv_ABCDEF:Histone-fold; title=CLASS2 OF THE INO80-HEXASOME COMPLEX organism=? DNA sequence DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DC(J70):DG(I-70) DC(J71):DG(I-71) DA(J72):DT(I-72) chainA chainB chainC ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF prot.sequence llirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger/rdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqg/ktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgisskAmsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirgera/dnIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >8eu2_KLMNOP:Histone-fold; title=CLASS3 OF THE INO80-HEXASOME COMPLEX organism=? DNA sequence DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DC(J70):DG(I-70) DC(J71):DG(I-71) DA(J72):DT(I-72) chainK chainL chainM ( 28) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainO ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP prot.sequence llirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger/rdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqg/ktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk/ktrkesyaiyvykvlkqvhpdtgisskAmsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirgera/dnIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >8eue_ABCDEFHK:Histone-fold; title=CLASS1 OF THE INO80-NUCLEOSOME COMPLEX organism=? DNA sequence DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 9) ARG49 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 57) ARG78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 63) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 21) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence yrpgtvalReirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/lrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakRktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktRiiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkkt/kesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqTavrlllpgelakhavsegtkavtkytsa/kkphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakRvtimpkdiqlarrirgera/dniqGitkpairrlarrggvkrisgliyeEtrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/ktrssraglqfpvgrvhrllRkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >8eue_E:Histone-fold; title=CLASS1 OF THE INO80-NUCLEOSOME COMPLEX organism=? DNA sequence DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainE ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakRvtimpkdiqlarrirgera >8euj_f:Histone-fold; title=CLASS2 OF THE INO80-NUCLEOSOME COMPLEX organism=? DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DA(J-70):DT(I70) DA(J-69):DT(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DC(J-65):DG(I65) DC(J-64):DG(I64) DA(J-63):DT(I63) DC(J-62):DG(I62) DC(J-61):DG(I61) DT(J-60):DA(I60) DG(J-59):DC(I59) DC(J-58):DG(I58) DA(J-57):DT(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DT(J-51):DA(I51) DA(J-50):DT(I50) DC(J-49):DG(I49) DC(J-48):DG(I48) DA(J-47):DT(I47) DA(J-46):DT(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DT(J-40):DA(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DT(J-36):DA(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DA(J-32):DT(I32) DA(J-31):DT(I31) DC(J-30):DG(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DC(J-25):DG(I25) DC(J-24):DG(I24) DA(J-23):DT(I23) DT(J-22):DA(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DA(J-19):DT(I19) DA(J-18):DT(I18) DA(J-17):DT(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DC(J-14):DG(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DG(J-11):DC(I11) DT(J-10):DA(I10) DT(J-9):DA(I9) DC(J-8):DG(I8) DA(J-7):DT(I7) DG(J-6):DC(I6) DC(J-5):DG(I5) DT(J-4):DA(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DA(J4):DT(I-4) DG(J5):DC(I-5) DC(J6):DG(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DA(J9):DT(I-9) DA(J10):DT(I-10) DC(J11):DG(I-11) DA(J12):DT(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DC(J15):DG(I-15) DC(J16):DG(I-16) DT(J17):DA(I-17) DT(J18):DA(I-18) DT(J19):DA(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DA(J22):DT(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DG(J25):DC(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DC(J28):DG(I-28) DA(J29):DT(I-29) DG(J30):DC(I-30) DT(J31):DA(I-31) DT(J33):DA(I-32) DC(J34):DG(I-34) DC(J35):DG(I-35) DA(J36):DT(I-36) DA(J37):DT(I-37) DA(J38):DT(I-38) DT(J39):DA(I-39) DA(J40):DT(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DC(J43):DG(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DA(J51):DT(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DT(J57):DA(I-57) DG(J58):DC(I-58) DC(J59):DG(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DG(J65):DC(I-65) DA(J66):DT(I-66) DT(J67):DA(I-67) DA(J68):DT(I-68) DT(J69):DA(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainf ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 26) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RyRpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakRvtimpkdiqlarrirgera >8eve_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA INSERTION COMPLEX organism=Homo sapiens DNA sequence DA(T5):DT(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (314) SER322 1 2 0 0 0 0 0 0 (370) LEU378 0 5 2 0 0 0 0 0 (374) ARG382 0 0 0 0 10 15 0 0 (413) MET421 0 1 0 0 0 0 0 0 (415) PHE423 0 1 0 0 0 0 0 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltMlFlcatkfsas >8evf_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=HUMAN DNA POLYMERASE ETA EXTENSION COMPLEX WITH AN INCOMING DCTP organism=Homo sapiens DNA sequence DG(T4):DG(P8) DT(T6):DA(P7) DG(T7):DC(P6) DA(T8):DT(P5) DC(T9):DG(P4) DG(T10):DC(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA ( 36) GLN38 10 0 0 0 0 0 0 0 ( 46) ILE48 5 0 0 0 0 0 0 0 (308) SER322 0 1 0 0 0 0 0 0 (363) ARG382 0 0 0 0 5 7 0 0 prot.sequence tgqdrvvalvdmdcffvqveqrqnphlrnkpcavvQykswkgggiIavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqqkegmrkqglfqwldslltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsa >8evg_ABCDEFGH: title=162BP CX3CR1 NUCLEOSOME (FURTHER CLASSIFIED WITH BETTER NUCLEOSOME END) organism=? DNA sequence DG(I6):DC(J157) DC(I7):DG(J156) DA(I8):DT(J155) DG(I9):DC(J154) DG(I10):DC(J153) DG(I11):DC(J152) DC(I12):DG(J151) DC(I13):DG(J150) DT(I14):DA(J149) DC(I15):DG(J148) DT(I16):DA(J147) DC(I17):DG(J146) DG(I18):DC(J145) DG(I19):DC(J144) DC(I20):DG(J143) DT(I21):DA(J142) DG(I22):DC(J141) DC(I23):DG(J140) DT(I24):DA(J139) DG(I25):DC(J138) DA(I26):DT(J137) DT(I27):DA(J136) DC(I28):DG(J135) DT(I29):DA(J134) DT(I30):DA(J133) DC(I31):DG(J132) DA(I32):DT(J131) DG(I33):DC(J130) DC(I34):DG(J129) DT(I35):DA(J128) DG(I36):DC(J127) DG(I37):DC(J126) DT(I38):DA(J125) DT(I39):DA(J124) DG(I40):DC(J123) DC(I41):DG(J122) DT(I42):DA(J121) DG(I43):DC(J120) DA(I44):DT(J119) DG(I45):DC(J118) DA(I46):DT(J117) DG(I47):DC(J116) DT(I48):DA(J115) DT(I49):DA(J114) DG(I50):DC(J113) DC(I51):DG(J112) DA(I52):DT(J111) DG(I53):DC(J110) DC(I54):DG(J109) DA(I55):DT(J108) DT(I56):DA(J107) DT(I57):DA(J106) DG(I58):DC(J105) DC(I59):DG(J104) DT(I60):DA(J103) DG(I61):DC(J102) DA(I62):DT(J101) DG(I63):DC(J100) DT(I64):DA(J99) DC(I65):DG(J98) DT(I66):DA(J97) DT(I67):DA(J96) DA(I68):DT(J95) DG(I69):DC(J94) DC(I70):DG(J93) DA(I71):DT(J92) DA(I72):DT(J91) DT(I73):DA(J90) DG(I74):DC(J89) DG(I75):DC(J88) DA(I76):DT(J87) DT(I77):DA(J86) DA(I78):DT(J85) DC(I79):DG(J84) DT(I80):DA(J83) DT(I81):DA(J82) DC(I82):DG(J81) DC(I83):DG(J80) DC(I84):DG(J79) DG(I85):DC(J78) DA(I86):DT(J77) DT(I87):DA(J76) DT(I88):DA(J75) DC(I89):DG(J74) DC(I90):DG(J73) DC(I91):DG(J72) DC(I92):DG(J71) DT(I93):DA(J70) DC(I94):DG(J69) DA(I95):DT(J68) DC(I96):DG(J67) DA(I97):DT(J66) DA(I98):DT(J65) DA(I99):DT(J64) DA(I100):DT(J63) DA(I101):DT(J62) DT(I102):DA(J61) DA(I103):DT(J60) DG(I104):DC(J59) DG(I105):DC(J58) DT(I106):DA(J57) DC(I107):DG(J56) DA(I108):DT(J55) DG(I109):DC(J54) DT(I110):DA(J53) DC(I111):DG(J52) DT(I112):DA(J51) DG(I113):DC(J50) DT(I114):DA(J49) DC(I115):DG(J48) DT(I116):DA(J47) DG(I117):DC(J46) DG(I118):DC(J45) DC(I119):DG(J44) DT(I120):DA(J43) DA(I121):DT(J42) DG(I122):DC(J41) DT(I123):DA(J40) DT(I124):DA(J39) DC(I125):DG(J38) DT(I126):DA(J37) DG(I127):DC(J36) DT(I128):DA(J35) DA(I129):DT(J34) DC(I130):DG(J33) DT(I131):DA(J32) DT(I132):DA(J31) DG(I133):DC(J30) DC(I134):DG(J29) DA(I135):DT(J28) DG(I136):DC(J27) DA(I137):DT(J26) DC(I138):DG(J25) DA(I139):DT(J24) DC(I140):DG(J23) DA(I141):DT(J22) DG(I142):DC(J21) DG(I143):DC(J20) DG(I144):DC(J19) DC(I145):DG(J18) DA(I146):DT(J17) DT(I147):DA(J16) DG(I148):DC(J15) DT(I149):DA(J14) DG(I150):DC(J13) DG(I151):DC(J12) DG(I152):DC(J11) chainA ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 26) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/kvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akaksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akaksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >8evg_H:Histone-fold; title=162BP CX3CR1 NUCLEOSOME (FURTHER CLASSIFIED WITH BETTER NUCLEOSOME END) organism=? DNA sequence DC(J11):DG(I152) DC(J12):DG(I151) DC(J13):DG(I150) DA(J14):DT(I149) DC(J15):DG(I148) DA(J16):DT(I147) DT(J17):DA(I146) DG(J18):DC(I145) DC(J19):DG(I144) DC(J20):DG(I143) DC(J21):DG(I142) DT(J22):DA(I141) DG(J23):DC(I140) DT(J24):DA(I139) DG(J25):DC(I138) DT(J26):DA(I137) DC(J27):DG(I136) DT(J28):DA(I135) DG(J29):DC(I134) DC(J30):DG(I133) DA(J31):DT(I132) DA(J32):DT(I131) DG(J33):DC(I130) DT(J34):DA(I129) DA(J35):DT(I128) DC(J36):DG(I127) DA(J37):DT(I126) DG(J38):DC(I125) DA(J39):DT(I124) DA(J40):DT(I123) DC(J41):DG(I122) DT(J42):DA(I121) DA(J43):DT(I120) DG(J44):DC(I119) DC(J45):DG(I118) DC(J46):DG(I117) DA(J47):DT(I116) DG(J48):DC(I115) DA(J49):DT(I114) DC(J50):DG(I113) DA(J51):DT(I112) DG(J52):DC(I111) DA(J53):DT(I110) DC(J54):DG(I109) DT(J55):DA(I108) DG(J56):DC(I107) DA(J57):DT(I106) DC(J58):DG(I105) DC(J59):DG(I104) DT(J60):DA(I103) DA(J61):DT(I102) DT(J62):DA(I101) DT(J63):DA(I100) DT(J64):DA(I99) DT(J65):DA(I98) DT(J66):DA(I97) DG(J67):DC(I96) DT(J68):DA(I95) DG(J69):DC(I94) DA(J70):DT(I93) DG(J71):DC(I92) DG(J72):DC(I91) DG(J73):DC(I90) DG(J74):DC(I89) DA(J75):DT(I88) DA(J76):DT(I87) DT(J77):DA(I86) DC(J78):DG(I85) DG(J79):DC(I84) DG(J80):DC(I83) DG(J81):DC(I82) DA(J82):DT(I81) DA(J83):DT(I80) DG(J84):DC(I79) DT(J85):DA(I78) DA(J86):DT(I77) DT(J87):DA(I76) DC(J88):DG(I75) DC(J89):DG(I74) DA(J90):DT(I73) DT(J91):DA(I72) DT(J92):DA(I71) DG(J93):DC(I70) DC(J94):DG(I69) DT(J95):DA(I68) DA(J96):DT(I67) DA(J97):DT(I66) DG(J98):DC(I65) DA(J99):DT(I64) DC(J100):DG(I63) DT(J101):DA(I62) DC(J102):DG(I61) DA(J103):DT(I60) DG(J104):DC(I59) DC(J105):DG(I58) DA(J106):DT(I57) DA(J107):DT(I56) DT(J108):DA(I55) DG(J109):DC(I54) DC(J110):DG(I53) DT(J111):DA(I52) DG(J112):DC(I51) DC(J113):DG(I50) DA(J114):DT(I49) DA(J115):DT(I48) DC(J116):DG(I47) DT(J117):DA(I46) DC(J118):DG(I45) DT(J119):DA(I44) DC(J120):DG(I43) DA(J121):DT(I42) DG(J122):DC(I41) DC(J123):DG(I40) DA(J124):DT(I39) DA(J125):DT(I38) DC(J126):DG(I37) DC(J127):DG(I36) DA(J128):DT(I35) DG(J129):DC(I34) DC(J130):DG(I33) DT(J131):DA(I32) DG(J132):DC(I31) DA(J133):DT(I30) DA(J134):DT(I29) DG(J135):DC(I28) DA(J136):DT(I27) DT(J137):DA(I26) DC(J138):DG(I25) DA(J139):DT(I24) DG(J140):DC(I23) DC(J141):DG(I22) DA(J142):DT(I21) DG(J143):DC(I20) DC(J144):DG(I19) DC(J145):DG(I18) DG(J146):DC(I17) DA(J147):DT(I16) DG(J148):DC(I15) DA(J149):DT(I14) DG(J150):DC(I13) DG(J151):DC(I12) DC(J152):DG(I11) DC(J153):DG(I10) DC(J154):DG(I9) DT(J155):DA(I8) DG(J156):DC(I7) DC(J157):DG(I6) chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >8evh_H:Histone-fold; title=CX3CR1 NUCLEOSOME AND WILD TYPE PU.1 COMPLEX organism=? DNA sequence DA(J2):DT(I162) DA(J3):DT(I160) DT(J4):DA(I159) DA(J5):DT(I158) DG(J6):DC(I157) DG(J7):DC(I156) DA(J8):DT(I155) DA(J9):DT(I154) DC(J10):DG(I153) DC(J11):DG(I152) DC(J12):DG(I151) DC(J13):DG(I150) DA(J14):DT(I149) DC(J15):DG(I148) DA(J16):DT(I147) DT(J17):DA(I146) DG(J18):DC(I145) DC(J19):DG(I144) DC(J20):DG(I143) DC(J21):DG(I142) DT(J22):DA(I141) DG(J23):DC(I140) DT(J24):DA(I139) DG(J25):DC(I138) DT(J26):DA(I137) DC(J27):DG(I136) DT(J28):DA(I135) DG(J29):DC(I134) DC(J30):DG(I133) DA(J31):DT(I132) DA(J32):DT(I131) DG(J33):DC(I130) DT(J34):DA(I129) DA(J35):DT(I128) DC(J36):DG(I127) DA(J37):DT(I126) DG(J38):DC(I125) DA(J39):DT(I124) DA(J40):DT(I123) DC(J41):DG(I122) DT(J42):DA(I121) DA(J43):DT(I120) DG(J44):DC(I119) DC(J45):DG(I118) DC(J46):DG(I117) DA(J47):DT(I116) DG(J48):DC(I115) DA(J49):DT(I114) DC(J50):DG(I113) DA(J51):DT(I112) DG(J52):DC(I111) DA(J53):DT(I110) DC(J54):DG(I109) DT(J55):DA(I108) DG(J56):DC(I107) DA(J57):DT(I106) DC(J58):DG(I105) DC(J59):DG(I104) DT(J60):DA(I103) DA(J61):DT(I102) DT(J62):DA(I101) DT(J63):DA(I100) DT(J64):DA(I99) DT(J65):DA(I98) DT(J66):DA(I97) DG(J67):DC(I96) DT(J68):DA(I95) DG(J69):DC(I94) DA(J70):DT(I93) DG(J71):DC(I92) DG(J72):DC(I91) DG(J73):DC(I90) DG(J74):DC(I89) DA(J75):DT(I88) DA(J76):DT(I87) DT(J77):DA(I86) DC(J78):DG(I85) DG(J79):DC(I84) DG(J80):DC(I83) DG(J81):DC(I82) DA(J82):DT(I81) DA(J83):DT(I80) DG(J84):DC(I79) DT(J85):DA(I78) DA(J86):DT(I77) DT(J87):DA(I76) DC(J88):DG(I75) DC(J89):DG(I74) DA(J90):DT(I73) DT(J91):DA(I72) DT(J92):DA(I71) DG(J93):DC(I70) DC(J94):DG(I69) DT(J95):DA(I68) DA(J96):DT(I67) DA(J97):DT(I66) DG(J98):DC(I65) DA(J99):DT(I64) DC(J100):DG(I63) DT(J101):DA(I62) DC(J102):DG(I61) DA(J103):DT(I60) DG(J104):DC(I59) DC(J105):DG(I58) DA(J106):DT(I57) DA(J107):DT(I56) DT(J108):DA(I55) DG(J109):DC(I54) DC(J110):DG(I53) DT(J111):DA(I52) DG(J112):DC(I51) DC(J113):DG(I50) DA(J114):DT(I49) DA(J115):DT(I48) DC(J116):DG(I47) DT(J117):DA(I46) DC(J118):DG(I45) DT(J119):DA(I44) DC(J120):DG(I43) DA(J121):DT(I42) DG(J122):DC(I41) DC(J123):DG(I40) DA(J124):DT(I39) DA(J125):DT(I38) DC(J126):DG(I37) DC(J127):DG(I36) DA(J128):DT(I35) DG(J129):DC(I34) DC(J130):DG(I33) DT(J131):DA(I32) DG(J132):DC(I31) DA(J133):DT(I30) DA(J134):DT(I29) DG(J135):DC(I28) DA(J136):DT(I27) DT(J137):DA(I26) DC(J138):DG(I25) DA(J139):DT(I24) DG(J140):DC(I23) DC(J141):DG(I22) chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >8evi_C:Histone-fold; title=CX3CR1 NUCLEOSOME AND PU.1 COMPLEX CONTAINING DISULFIDE BOND MUTATIONS organism=? DNA sequence DG(I22):DC(J141) DC(I23):DG(J140) DT(I24):DA(J139) DG(I25):DC(J138) DA(I26):DT(J137) DT(I27):DA(J136) DC(I28):DG(J135) DT(I29):DA(J134) DT(I30):DA(J133) DC(I31):DG(J132) DA(I32):DT(J131) DG(I33):DC(J130) DC(I34):DG(J129) DT(I35):DA(J128) DG(I36):DC(J127) DG(I37):DC(J126) DT(I38):DA(J125) DT(I39):DA(J124) DG(I40):DC(J123) DC(I41):DG(J122) DT(I42):DA(J121) DG(I43):DC(J120) DA(I44):DT(J119) DG(I45):DC(J118) DA(I46):DT(J117) DG(I47):DC(J116) DT(I48):DA(J115) DT(I49):DA(J114) DG(I50):DC(J113) DC(I51):DG(J112) DA(I52):DT(J111) DG(I53):DC(J110) DC(I54):DG(J109) DA(I55):DT(J108) DT(I56):DA(J107) DT(I57):DA(J106) DG(I58):DC(J105) DC(I59):DG(J104) DT(I60):DA(J103) DG(I61):DC(J102) DA(I62):DT(J101) DG(I63):DC(J100) DT(I64):DA(J99) DC(I65):DG(J98) DT(I66):DA(J97) DT(I67):DA(J96) DA(I68):DT(J95) DG(I69):DC(J94) DC(I70):DG(J93) DA(I71):DT(J92) DA(I72):DT(J91) DT(I73):DA(J90) DG(I74):DC(J89) DG(I75):DC(J88) DA(I76):DT(J87) DT(I77):DA(J86) DA(I78):DT(J85) DC(I79):DG(J84) DT(I80):DA(J83) DT(I81):DA(J82) DC(I82):DG(J81) DC(I83):DG(J80) DC(I84):DG(J79) DG(I85):DC(J78) DA(I86):DT(J77) DT(I87):DA(J76) DT(I88):DA(J75) DC(I89):DG(J74) DC(I90):DG(J73) DC(I91):DG(J72) DC(I92):DG(J71) DT(I93):DA(J70) DC(I94):DG(J69) DA(I95):DT(J68) DC(I96):DG(J67) DA(I97):DT(J66) DA(I98):DT(J65) DA(I99):DT(J64) DA(I100):DT(J63) DA(I101):DT(J62) DT(I102):DA(J61) DA(I103):DT(J60) DG(I104):DC(J59) DG(I105):DC(J58) DT(I106):DA(J57) DC(I107):DG(J56) DA(I108):DT(J55) DG(I109):DC(J54) DT(I110):DA(J53) DC(I111):DG(J52) DT(I112):DA(J51) DG(I113):DC(J50) DT(I114):DA(J49) DC(I115):DG(J48) DT(I116):DA(J47) DG(I117):DC(J46) DG(I118):DC(J45) DC(I119):DG(J44) DT(I120):DA(J43) DA(I121):DT(J42) DG(I122):DC(J41) DT(I123):DA(J40) DT(I124):DA(J39) DC(I125):DG(J38) DT(I126):DA(J37) DG(I127):DC(J36) DT(I128):DA(J35) DA(I129):DT(J34) DC(I130):DG(J33) DT(I131):DA(J32) DT(I132):DA(J31) DG(I133):DC(J30) DC(I134):DG(J29) DA(I135):DT(J28) DG(I136):DC(J27) DA(I137):DT(J26) DC(I138):DG(J25) DA(I139):DT(J24) DC(I140):DG(J23) DA(I141):DT(J22) DG(I142):DC(J21) DG(I143):DC(J20) DG(I144):DC(J19) DC(I145):DG(J18) DA(I146):DT(J17) DT(I147):DA(J16) DG(I148):DC(J15) DT(I149):DA(J14) DG(I150):DC(J13) DG(I151):DC(J12) DG(I152):DC(J11) DG(I153):DC(J10) DT(I154):DA(J9) DT(I155):DA(J8) DC(I156):DG(J7) DC(I157):DG(J6) DT(I158):DA(J5) DA(I159):DT(J4) DT(I160):DA(J3) DT(I162):DA(J2) DT(I163):DA(J1) DT(I164):DA(J-1) chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence akaksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkkcriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk >8evj_E:Histone-fold; title=CX3CR1 NUCLEOSOME BOUND PU.1 AND C/EBPA organism=? DNA sequence DT(I27):DA(J136) DC(I28):DG(J135) DT(I29):DA(J134) DT(I30):DA(J133) DC(I31):DG(J132) DA(I32):DT(J131) DG(I33):DC(J130) DC(I34):DG(J129) DT(I35):DA(J128) DG(I36):DC(J127) DG(I37):DC(J126) DT(I38):DA(J125) DT(I39):DA(J124) DG(I40):DC(J123) DC(I41):DG(J122) DT(I42):DA(J121) DG(I43):DC(J120) DA(I44):DT(J119) DG(I45):DC(J118) DG(I47):DT(J117) DT(I48):DA(J115) DT(I49):DA(J114) DC(I51):DG(J112) DA(I52):DT(J111) DG(I53):DC(J110) DC(I54):DG(J109) DA(I55):DT(J108) DT(I56):DA(J107) DT(I57):DA(J106) DG(I58):DC(J105) DC(I59):DG(J104) DT(I60):DA(J103) DG(I61):DC(J102) DA(I62):DT(J101) DG(I63):DC(J100) DT(I64):DA(J99) DC(I65):DG(J98) DT(I66):DA(J97) DT(I67):DA(J96) DA(I68):DT(J95) DG(I69):DC(J94) DC(I70):DG(J93) DA(I71):DT(J92) DA(I72):DT(J91) DT(I73):DA(J90) DG(I74):DC(J89) DG(I75):DC(J88) DA(I76):DT(J87) DT(I77):DA(J86) DA(I78):DT(J85) DC(I79):DG(J84) DT(I80):DA(J83) DT(I81):DA(J82) DC(I82):DG(J81) DC(I83):DG(J80) DC(I84):DG(J79) DG(I85):DC(J78) DA(I86):DT(J77) DT(I87):DA(J76) DT(I88):DA(J75) DC(I89):DG(J74) DC(I90):DG(J73) DC(I91):DG(J72) DC(I92):DG(J71) DT(I93):DA(J70) DC(I94):DG(J69) DA(I95):DT(J68) DC(I96):DG(J67) DA(I97):DT(J66) DA(I98):DT(J65) DA(I99):DT(J64) DA(I100):DT(J63) DA(I101):DT(J62) DT(I102):DA(J61) DA(I103):DT(J60) DG(I104):DC(J59) DG(I105):DC(J58) DT(I106):DA(J57) DC(I107):DG(J56) DA(I108):DT(J55) DG(I109):DC(J54) DT(I110):DA(J53) DC(I111):DG(J52) DT(I112):DA(J51) DG(I113):DC(J50) DT(I114):DA(J49) DC(I115):DG(J48) DT(I116):DA(J47) DG(I117):DC(J46) DG(I118):DC(J45) DC(I119):DG(J44) DT(I120):DA(J43) DA(I121):DT(J42) DG(I122):DC(J41) DT(I123):DA(J40) DT(I124):DA(J39) DC(I125):DG(J38) DT(I126):DA(J37) DG(I127):DC(J36) DT(I128):DA(J35) DA(I129):DT(J34) DC(I130):DG(J33) DT(I131):DA(J32) DT(I132):DA(J31) DG(I133):DC(J30) DC(I134):DG(J29) DA(I135):DT(J28) DG(I136):DC(J27) DA(I137):DT(J26) DC(I138):DG(J25) DA(I139):DT(J24) DC(I140):DG(J23) DA(I141):DT(J22) DG(I142):DC(J21) DG(I143):DC(J20) DG(I144):DC(J19) DC(I145):DG(J18) DA(I146):DT(J17) DT(I147):DA(J16) DG(I148):DC(J15) DT(I149):DA(J14) DG(I150):DC(J13) DG(I151):DC(J12) DG(I152):DC(J11) DG(I153):DC(J10) DT(I154):DA(J9) DT(I155):DA(J8) DC(I156):DG(J7) DC(I157):DG(J6) DT(I158):DA(J5) DA(I159):DT(J4) DT(I160):DA(J3) DT(I162):DA(J2) chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge >8ex9_A: title=ISDRA2 TNPB IN COMPLEX WITH RERNA AND COGNATE DNA, CONFORMATION 2 (RUVC DOMAIN UNRESOLVED) organism=? DNA sequence DA(D0):DT(C0) DT(D1):DA(C-1) DC(D2):DG(C-2) DA(D3):DT(C-3) DA(D4):DT(C-4) DC(D5):DG(C-5) DC(D6):DG(C-6) DG(D7):DC(C-7) DT(D8):DA(C-8) chainA ( 51) TYR52 5 0 0 0 0 0 0 0 0 ( 55) SER56 2 0 0 0 0 0 0 0 0 ( 75) LYS76 0 5 13 6 0 0 0 0 0 ( 76) PHE77 0 3 0 2 0 0 0 0 0 ( 79) GLN80 5 7 1 0 0 0 0 0 0 ( 83) LYS84 2 0 0 0 0 0 0 0 0 (114) GLN121 12 1 0 0 0 0 0 0 0 (116) THR123 0 5 7 1 0 0 0 0 0 (117) ASN124 0 0 0 0 7 5 0 0 0 (119) ASN126 0 0 0 0 1 0 0 0 0 prot.sequence irnkafvvrlypnaaqtelinrtlgsarfvynhflarriaaykesgkgltYgqtSseltllkqaeetswlsevdKFalQnslKnletayknffrtvvgfprfrkkrtgesyrtQfTNnNiqigegrlklpklgwvktkgqqdiqgkilnvtvrriheghyeasvlc >8exa_A: title=ISDRA2 TNPB IN COMPLEX WITH RERNA AND COGNATE DNA, CONFORMATION 1 (RUVC DOMAIN RESOLVED) organism=? DNA sequence DC(C-7):DG(D7) DG(C-6):DC(D6) DG(C-5):DC(D5) DT(C-4):DA(D4) DT(C-3):DA(D3) DG(C-2):DC(D2) DA(C-1):DT(D1) DT(C0):DA(D0) chainA ( 51) TYR52 0 0 0 0 0 0 0 6 ( 55) SER56 0 0 0 0 0 0 0 2 ( 75) LYS76 0 0 0 0 4 11 3 0 ( 76) PHE77 0 0 0 0 3 0 2 0 ( 79) GLN80 0 0 0 0 0 3 7 2 ( 83) LYS84 0 0 0 0 0 0 0 3 (120) GLN121 0 0 0 0 0 0 2 7 (122) THR123 0 0 0 3 4 7 2 0 (123) ASN124 0 0 0 3 1 0 0 0 (125) ASN126 0 0 0 2 0 0 0 0 prot.sequence irnkafvvrlypnaaqtelinrtlgsarfvynhflarriaaykesgkgltYgqtSseltllkqaeetswlsevdKFalQnslKnletayknffrtvkqsgkkvgfprfrkkrtgesyrtQfTNnNiqigegrlklpklgwvktkgqqdiqgkilnvtvrriheghyeasvlceveipylpaapkfaagvdvgikdfaivtdgvrfkheqnpkyyrstlkrlrkaqqtlsrrkkgsarygkaktklarihkrivnkrqdflhklttslvreyeiigtehlkpdnmrknrrlalsisdagwgefirqleykaawygrlvskvspdrdenaalnirrealvaag >8exy_CDG: title=M. TUBERCULOSIS RNAP PAUSED COMPLEX WITH B. SUBTILIS NUSG AND GMPCPP organism=? DNA sequence DC(T1):DG(N40) DG(T2):DC(N39) DG(T3):DC(N38) DC(T4):DG(N37) DA(T5):DT(N36) DG(T6):DC(N35) DT(T7):DA(N34) DC(T8):DG(N33) DG(T9):DC(N32) DC(T10):DG(N31) DC(T11):DG(N30) DG(T12):DC(N29) DT(T13):DA(N28) DC(T14):DC(N27) DT(T15):DT(N26) DA(T16):DA(N25) DC(T17):DC(N24) DC(T18):DC(N23) DT(T19):DG(N22) DC(T20):DT(N21) DT(T21):DT(N20) DC(T22):DT(N19) DC(T23):DC(N18) DA(T24):DT(N17) DA(T25):DT(N16) DG(T26):DC(N15) DA(T27):DT(N14) DG(T28):DC(N13) DC(T29):DG(N12) DA(T30):DT(N11) DG(T31):DC(N10) DC(T32):DG(N9) DA(T33):DT(N8) DT(T34):DA(N7) DG(T35):DC(N6) DC(T36):DG(N5) DG(T37):DC(N4) DC(T38):DG(N3) chainC (437) GLU466 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) ARG467 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (329) LEU330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (335) ALA336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) ARG389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (500) ALA501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (501) PRO502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (866) THR867 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (867) ALA868 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 9) TYR11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASP73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) TRP76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) TYR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ASN81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) THR86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvrspgvyfdetidkstdktlhsvkvipsrgawlefdvdkrdtvgvridrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgepptkesaqtllenlffkekrydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtlinirpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpgglsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlssdgaaielrege/ldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgqkklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLdggrfAtsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtalrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrtditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkhedgservlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/knwyvvhtYsgyenkvkanlekrvesmgmqdkifrvvvpeeeetdikngkkkvvkkkvfpgyvlveivmtDdsWYvvRNtpgvTgfvgsagsgskptpllpgeaetilkr >8exy_G:N-utilization_substance_G_protein_NusG,_N-terminal_domain; title=M. TUBERCULOSIS RNAP PAUSED COMPLEX WITH B. SUBTILIS NUSG AND GMPCPP organism=? DNA sequence DG(N3):DC(T38) DC(N4):DG(T37) DG(N5):DC(T36) DC(N6):DG(T35) DA(N7):DT(T34) DT(N8):DA(T33) DG(N9):DC(T32) DC(N10):DG(T31) DT(N11):DA(T30) DG(N12):DC(T29) DC(N13):DG(T28) DT(N14):DA(T27) DC(N15):DG(T26) DT(N16):DA(T25) DT(N17):DA(T24) DC(N18):DC(T23) DT(N19):DC(T22) DT(N20):DT(T21) DT(N21):DC(T20) DG(N22):DT(T19) DC(N23):DC(T18) DC(N24):DC(T17) DA(N25):DA(T16) DT(N26):DT(T15) DC(N27):DC(T14) DA(N28):DT(T13) DC(N29):DG(T12) DG(N30):DC(T11) DG(N31):DC(T10) DC(N32):DG(T9) DG(N33):DC(T8) DA(N34):DT(T7) DC(N35):DG(T6) DT(N36):DA(T5) DG(N37):DC(T4) DC(N38):DG(T3) DC(N39):DG(T2) DG(N40):DC(T1) chainG ( 9) TYR11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ASP73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) TRP76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) TYR77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ASN81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) THR86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence knwyvvhtYsgyenkvkanlekrvesmgmqdkifrvvvpeeeetdikngkkkvvkkkvfpgyvlveivmtDdsWYvvRNtpgvTgfvgsagsgskptpllpgeaetilkr >8eza_ABC: title=NHEJ LONG-RANGE COMPLEX WITH PAXX organism=? DNA sequence DT(D3):DA(E28) DA(D4):DT(E27) DA(D5):DT(E26) DG(D6):DC(E25) DA(D7):DT(E24) DA(D8):DT(E23) DC(D9):DG(E22) DT(D10):DA(E21) DC(D11):DG(E20) DT(D12):DA(E19) DG(D13):DC(E18) DA(D14):DT(E17) DT(D15):DA(E16) DG(D16):DC(E15) DT(D17):DA(E14) DC(D18):DG(E13) DA(D19):DT(E12) DG(D20):DC(E11) DT(D21):DA(E10) DA(D22):DT(E9) DG(D23):DT(E7) DA(D24):DA(E6) DT(D25):DA(E5) DA(D27):DT(E4) DC(D28):DG(E3) DA(D29):DT(E2) DC(D30):DG(E1) chainA (217) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (366) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (370) ARG400 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (259) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (2406) GLN2736 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 (2409) LEU2739 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (2410) SER2740 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (2413) TYR2743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 (2414) ALA2744 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence ykysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeifvddlldm/agvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlptykdyvdlfrhllssdqmmdsseslnhllydefvksvlkivekldltleiaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegvpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsalevsalsraaqkgfnkvvlkhlkktkeaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptllyslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgderqclpsldlsckqlasgllelafafgglcerlvslllnpavlstsvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvmdelnrhecmapltalvkhmhrslprdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltpmgrtdllrlrrrfmrdQekLSlmYArkgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrllprlppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltpisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgsssedsekviaglyqrafqhlseavqaaeeeaagvidaymtladfcdqqlrkeeenasvidsaelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm >8eza_B:SPOC_domain-like;vWA-like; title=NHEJ LONG-RANGE COMPLEX WITH PAXX organism=? DNA sequence DG(E1):DC(D30) DT(E2):DA(D29) DG(E3):DC(D28) DT(E4):DA(D27) DA(E5):DT(D25) DA(E6):DA(D24) DT(E7):DG(D23) DT(E9):DA(D22) DA(E10):DT(D21) DC(E11):DG(D20) DT(E12):DA(D19) DG(E13):DC(D18) DA(E14):DT(D17) DC(E15):DG(D16) DA(E16):DT(D15) DT(E17):DA(D14) DC(E18):DG(D13) DA(E19):DT(D12) DG(E20):DC(D11) DA(E21):DT(D10) DG(E22):DC(D9) DT(E23):DA(D8) DT(E24):DA(D7) DC(E25):DG(D6) DT(E26):DA(D5) DT(E27):DA(D4) DA(E28):DT(D3) chainB (370) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeifvddlldm >8eza_JKL: title=NHEJ LONG-RANGE COMPLEX WITH PAXX organism=? DNA sequence DG(N1):DC(M30) DT(N2):DA(M29) DG(N3):DC(M28) DT(N4):DA(M27) DA(N5):DT(M25) DA(N6):DA(M24) DT(N7):DG(M23) DT(N9):DA(M22) DA(N10):DT(M21) DC(N11):DG(M20) DT(N12):DA(M19) DG(N13):DC(M18) DA(N14):DT(M17) DC(N15):DG(M16) DA(N16):DT(M15) DT(N17):DA(M14) DC(N18):DG(M13) DA(N19):DT(M12) DG(N20):DC(M11) DA(N21):DT(M10) DG(N22):DC(M9) DT(N23):DA(M8) DT(N24):DA(M7) DC(N25):DG(M6) DT(N26):DA(M5) DT(N27):DA(M4) DA(N28):DT(M3) chainJ (217) ARG254 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (366) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK (370) ARG400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 chainL (259) ARG264 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2406) GLN2736 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2409) LEU2739 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2410) SER2740 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2413) TYR2743 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (2414) ALA2744 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ykysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeifvddlldm/agvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkRyavpsaglrlfalhasqfstclldnyvslfevllkwcahtnvelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsnnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgddrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlptykdyvdlfrhllssdqmmdsseslnhllydefvksvlkivekldltleiaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegvpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsalevsalsraaqkgfnkvvlkhlkktkeaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptllyslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgderqclpsldlsckqlasgllelafafgglcerlvslllnpavlstsvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvmdelnrhecmapltalvkhmhrslprdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltpmgrtdllrlrrrfmrdQekLSlmYArkgvaeqkrekeikselkmkqdaqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrllprlppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltpisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgsssedsekviaglyqrafqhlseavqaaeeeaagvidaymtladfcdqqlrkeeenasvidsaelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm >8ezb_ABC: title=NHEJ LONG-RANGE COMPLEX WITH ATP organism=? DNA sequence DT(D3):DA(E28) DA(D4):DT(E27) DA(D5):DT(E26) DG(D6):DC(E25) DA(D7):DT(E24) DA(D8):DT(E23) DC(D9):DG(E22) DT(D10):DA(E21) DC(D11):DG(E20) DT(D12):DA(E19) DG(D13):DC(E18) DA(D14):DT(E17) DT(D15):DA(E16) DG(D16):DC(E15) DT(D17):DA(E14) DC(D18):DG(E13) DA(D19):DT(E12) DG(D20):DC(E11) DT(D21):DA(E10) DA(D22):DT(E9) DG(D23):DT(E7) DA(D24):DA(E6) DT(D25):DA(E5) DA(D27):DT(E4) DC(D28):DG(E3) DA(D29):DT(E2) DC(D30):DG(E1) chainA (217) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (366) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (370) ARG400 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (259) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (299) THR304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 (301) VAL306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 (350) ASN355 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (399) ASP404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence ykysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeif/agvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkRyavpsaglrlfalhasqfstclldnyvslfevllkwcahTnVelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsNnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgDdrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlptykdyvdlfrhllssdqmmdsseslnhllydefvksvlkivekldltleiaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegvpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsalaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptllyslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcfgtgaagnrtspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgderqclpsldlsckqlasgllelafafgglcerlvslllnpavlstsvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevmdelnrhecmapltalvkhmhrslprdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltpmfvetqasqgpvagqiratqqqhdftltqtqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrllpalppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltedisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgsssedsekviaglyqrafqhlseavqaaeeeaqpppaagvidaymtladfcdqqlrkeeenasvidsaelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm >8ezb_B:SPOC_domain-like;vWA-like; title=NHEJ LONG-RANGE COMPLEX WITH ATP organism=? DNA sequence DT(D3):DA(E28) DA(D4):DT(E27) DA(D5):DT(E26) DG(D6):DC(E25) DA(D7):DT(E24) DA(D8):DT(E23) DC(D9):DG(E22) DT(D10):DA(E21) DC(D11):DG(E20) DT(D12):DA(E19) DG(D13):DC(E18) DA(D14):DT(E17) DT(D15):DA(E16) DG(D16):DC(E15) DT(D17):DA(E14) DC(D18):DG(E13) DA(D19):DT(E12) DG(D20):DC(E11) DT(D21):DA(E10) DA(D22):DT(E9) DG(D23):DT(E7) DA(D24):DA(E6) DT(D25):DA(E5) DA(D27):DT(E4) DC(D28):DG(E3) DA(D29):DT(E2) DC(D30):DG(E1) chainB (370) ARG400 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeif >8ezb_JKL: title=NHEJ LONG-RANGE COMPLEX WITH ATP organism=? DNA sequence DT(M3):DA(N28) DA(M4):DT(N27) DA(M5):DT(N26) DG(M6):DC(N25) DA(M7):DT(N24) DA(M8):DT(N23) DC(M9):DG(N22) DT(M10):DA(N21) DC(M11):DG(N20) DT(M12):DA(N19) DG(M13):DC(N18) DA(M14):DT(N17) DT(M15):DA(N16) DG(M16):DC(N15) DT(M17):DA(N14) DC(M18):DG(N13) DA(M19):DT(N12) DG(M20):DC(N11) DT(M21):DA(N10) DA(M22):DT(N9) DG(M23):DT(N7) DA(M24):DA(N6) DT(M25):DA(N5) DA(M27):DT(N4) DC(M28):DG(N3) DA(M29):DT(N2) DC(M30):DG(N1) chainJ (217) ARG254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 (366) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK (370) ARG400 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL (259) ARG264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 (299) THR304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 (301) VAL306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 (350) ASN355 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (399) ASP404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence ykysgrdsliflvdaskamfesqsedeltpfdmsiqciqsvyiskiissdrdllavvfygtekdknsvnfkniyvlqeldnpgakrileldqfkgqqgqkrfqdmmghgsdyslsevlwvcanlfsdvqfkmshkrimlftnednphgndsakasrartkagdlrdtgifldlmhlkkpggfdislfyrdiisvhfeesskledllrkvraketrkRalsrlklklnkdivisvgiynlvqkalkpppiklyretnepvktktrtfntstgglllpsdtkrsqiygsrqiilekeeteelkrfddpglmlmgfkplvllkkhhylrpslfvypeeslvigsstlfsallikclekevaalcrytpRrnippyfvalvpqeeelddqkiqvtppgfqlvflpfaddkrkmpftekimatpeqvgkmkaiveklrftyrsdsfenpvlqqhfrnlealaldlmepeqavdltlpkveamnkrlgslvdefkelvyppdy/nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtdnplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigkkfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkierhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclndddetevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkvfaarddeaaavalsslihalddldmvaivryaydkRanpqvgvafphikhnyeclvyvqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplieakkkdqvtaqeif/agvrcsllrlqetlsaadrcgaalaghqlirglgqecvlssspavlalqtslvfsrdfgllvfvrkslnsiefrecreeilkflciflekmgqkiapysveikntctsvytkdraakckipaldllikllqtfrssrlmdefkigelfskfygelalkkkipdtvlekvyellgllgevhpseminnaenlfraflgelktqmtsavrepklpvlagclkglssllcnftksmeedpqtsreifnfvlkairpqidlkRyavpsaglrlfalhasqfstclldnyvslfevllkwcahTnVelkkaalsalesflkqvsnmvaknaemhknklqyfmeqfygiirnvdsNnkelsiairgyglfagpckvinakdvdfmyveliqrckqmfltqtdtgDdrvyqmpsflqsvasvllyldtvpevytpvlehlvvmqidsfpqyspkmqlvccraivkvflalaakgpvlrncistvvhqgliricskpvvlptykdyvdlfrhllssdqmmdsseslnhllydefvksvlkivekldltleiaanlhpakpkdfsafinlvefcreilpekqaeffepwvysfsyelilqstrlplisgfykllsitvrnakkikyfegvpekyscfalfvkfgkevavkmkqykdellascltfllslphniieldvrayvpalqmafklglsytplaevglnaleewsiyidrhvmqpyykdilpcldgylktsalaisleeirirvvqmlgslggqinknlltvtssdemmksyvawdrekrlsfavpfremkpvifldvflprvtelaltasdrqtkvaacellhsmvmfmlgkatqmpeggqgappmyqlykrtfpvllrlacdvdqvtrqlyeplvmqlihwftnnkkfesqdtvalleaildgivdpvdstlrdfcgrcireflkwsikqitpqqqekspvntkslfkrlyslalhpnafkrlgaslafnniyrefreeeslveqfvfealviymeslalahadekslgtiqqccdaidhlcriiekkhvslnkakkrrlprgfppsaslclldlvkwllahcgrpqtecrhksielfykfvpllpgnrspnlwlkdvlkeegvsflintfegggcgqpsgilaqptllyslqatlcwldlllaalecyntfigertvgalqvlgteaqssllkavafflesiamhdiiaaekcfgtgaagnrtspqegerynyskctvvvrimeftttllntspegwkllkkdlcnthlmrvlvqtlcepasigfnigdvqvmahlpdvcvnlmkalkmspykdilethlrekitaqsieelcavnlygpdaqvdrsrlaavvsackqlhragllhnilpsqstdlhhsvgtellslvykgiapgderqclpsldlsckqlasgllelafafgglcerlvslllnpavlstsvihfshgeyfyslfsetintellknldlavlelmqssvdntkmvsavlngmldqsfreranqkhqglklattilqhwkkcdswwakdspletkmavlallakilqidssvsfntshgsfpevfttyislladtkldlhlkgqavtllpfftsltggsleelrrvleqlivahfpmqsrefppgtprfnnyvdcmkkfldalelsqspmllelmtevlcreqqhvmeelfqssfrriarrgscvtqvgllesvyemfrkddprlsftrqsfvdrslltllwhcsldalreffstivvdaidvlksrftklnestfdtqitkkmgyykildvmysrlpkddvhakeskinqvfhgscitegneltktliklcydaftenmagenqllerrrlyhcaayncaisviccvfnelkfyqgflfsekpeknllifenlidlkrrynfpvevmdelnrhecmapltalvkhmhrslprdlpswmkflhgklgnpivplnirlflaklvinteevfrpyakhwlspllqlaasennggegihymvveivatilswtglatptgvpkdevlanrllnflmkhvfhpkravfrhnleiiktlvecwkdclsipyrlifekfsgkdpnskdnsvgiqllgivmandlppydpqcgiqsseyfqalvnnmsfvrykevyaaaaevlglilryvmerknileeslcelvakqlkqhqntmedkfivclnkvtksfppladrfmnavffllpkfhgvlktlclevvlcrvegmtelyfqlkskdfvqvmrhrdderqkvcldiiykmmpklkpvelrellnpvvefvshpsttcreqmynilmwihdnyrdpesetdndsqeifklakdvliqglidenpglqliirnfwshetrlpsntldrllalnslyspkievhflslatnfllemtsmspdypnpmfehplsecefqeytidsdwrfrstvltpmfvetqasqgpvagqiratqqqhdftltqtqvvlyrsyrhgdlpdiqikhsslitplqavaqrdpiiakqlfsslfsgilkemdkfktlseknnitqkllqdfnrflnttfsffppfvsciqdiscqhaallsldpaavsagclaslqqpvgirlleeallrllpalppdvlrwvelaklyrsigeydvlrgiftseigtkqitqsallaearsdyseaakqydealnkqdwvdgepteaekdfwelasldcynhlaewksleycstasidsenppdlnkiwsepfyqetylpymirsklklllqgeadqslltfidkamhgelqkailelhysqelsllyllqddvdrakyyiqngiqsfmqnyssidvllhqsrltklqsvqalteiqefisfiskqgnlssqvplkrllntwtnrypdakmdpmniwddiitnrcfflskieekltedisslirsckfsmkmkmidsarkqnnfslamkllkelhkesktrddwlvswvqsycrlshcrsrsqgcseqvltvlktvslldennvssylsknilafrdqnillgttyriianalssepaclaeieedkarrilelsgsssedsekviaglyqrafqhlseavqaaeeeaqpppaagvidaymtladfcdqqlrkeeenasvidsaelqaypalvvekmlkalklnsnearlkfprllqiierypeetlslmtkeissvpcwqfiswishmvalldkdqavavqhsveeitdnypqaivypfiissesysfkdtstghknkefvarikskldqggviqdfinaldqlsnpellfkdwsndvraelaktpvnkkniekmyermyaalgdpkapglgafrrkfiqtfgkefdkhfgkggskllrmklsdfnditnmlllkmnkdskppgnlkecspwmsdfkveflrneleipgqydgrgkplpeyhvriagfdervtvmaslrrpkriiirghderehpflvkggedlrqdqrveqlfqvmngilaqdsacsqralqlrtysvvpmtsrlgliewlentvtlkdlllntmsqeekaaylsdprappceykdwltkmsgkhdvgaymlmykganrtetvtsfrkreskvpadllkrafvrmstspeaflalrshfasshalicishwilgigdrhlnnfmvametggvigidfghafgsatqflpvpelmpfrltrqfinlmlpmketglmysimvhalrafrsdpglltntmdvfvkepsfdwknfeqkmlkkggswiqeinvaeknwyprqkicyakrklaganpavitcdelllghekapafrdyvavargskdhniraqepesglseetqvkclmdqatdpnilgrtwegwepwm >8f1j_IJ: title=SIGN RNA POLYMERASE EARLY-MELTED INTERMEDIATE BOUND TO MISMATCH DNA FRAGMENT DHSU36MM2 (-12A) organism=? DNA sequence DA(C7):DT(D66) DT(C8):DA(D65) DT(C9):DA(D64) DG(C10):DC(D63) DG(C11):DC(D62) DC(C12):DG(D61) DA(C13):DT(D60) DC(C14):DG(D59) DG(C15):DC(D58) DA(C16):DT(D57) DA(C17):DT(D56) DA(C18):DT(D55) chainI (541) ARG542 28 0 0 0 0 0 0 0 0 0 0 0 chainJ (210) THR212 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/dllkflkaqtkteefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8f1j_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=SIGN RNA POLYMERASE EARLY-MELTED INTERMEDIATE BOUND TO MISMATCH DNA FRAGMENT DHSU36MM2 (-12A) organism=? DNA sequence DT(D55):DA(C18) DT(D56):DA(C17) DT(D57):DA(C16) DC(D58):DG(C15) DG(D59):DC(C14) DT(D60):DA(C13) DG(D61):DC(C12) DC(D62):DG(C11) DC(D63):DG(C10) DA(D64):DT(C9) DA(D65):DT(C8) DT(D66):DA(C7) chainJ (210) THR212 0 0 1 0 0 0 0 0 0 0 0 0 prot.sequence dllkflkaqtkteefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8f1k_IJ: title=SIGN RNA POLYMERASE EARLY-MELTED INTERMEDIATE BOUND TO FULL DUPLEX DNA FRAGMENT DHSU36 (-12T) organism=? DNA sequence DA(C7):DT(D66) DT(C8):DA(D65) DT(C9):DA(D64) DG(C10):DC(D63) DG(C11):DC(D62) DC(C12):DG(D61) DA(C13):DT(D60) DC(C14):DG(D59) DG(C15):DC(D58) DA(C16):DT(D57) DA(C17):DT(D56) DA(C18):DT(D55) chainI (541) ARG542 38 0 0 0 0 0 0 0 0 0 0 0 chainJ (210) THR212 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/dllkflkaqtkteefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8f1k_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=SIGN RNA POLYMERASE EARLY-MELTED INTERMEDIATE BOUND TO FULL DUPLEX DNA FRAGMENT DHSU36 (-12T) organism=? DNA sequence DT(D55):DA(C18) DT(D56):DA(C17) DT(D57):DA(C16) DC(D58):DG(C15) DG(D59):DC(C14) DT(D60):DA(C13) DG(D61):DC(C12) DC(D62):DG(C11) DC(D63):DG(C10) DA(D64):DT(C9) DA(D65):DT(C8) DT(D66):DA(C7) chainJ (210) THR212 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence dllkflkaqtkteefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8f3c_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM CONSENSUS STRUCTURE OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE MINUS PREQ1 LIGAND organism=? DNA sequence DC(B1):DG(A38) DT(B2):DA(A37) DC(B3):DG(A36) DT(B4):DA(A35) DG(B5):DC(A34) DA(B6):DT(A33) DA(B7):DT(A32) DT(B8):DA(A31) DC(B9):DG(A30) DT(B10):DA(A29) DC(B11):DG(A28) DT(B12):DA(A27) DT(B13):DA(A26) DC(B14):DG(A25) DC(B15):DC(A13) DT(B16):DC(A12) DC(B17):DT(A11) DG(B18):DG(A10) DT(B19):DC(A9) chainI (162) LYS163 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgKthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >8f3c_IJ: title=CRYO-EM CONSENSUS STRUCTURE OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE MINUS PREQ1 LIGAND organism=? DNA sequence DC(A9):DT(B19) DG(A10):DG(B18) DT(A11):DC(B17) DC(A12):DT(B16) DC(A13):DC(B15) DG(A25):DC(B14) DA(A26):DT(B13) DA(A27):DT(B12) DG(A28):DC(B11) DA(A29):DT(B10) DG(A30):DC(B9) DA(A31):DT(B8) DT(A32):DA(B7) DT(A33):DA(B6) DC(A34):DG(B5) DA(A35):DT(B4) DG(A36):DC(B3) DA(A37):DT(B2) DG(A38):DC(B1) chainI (162) LYS163 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 25) LYS40 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG47 2 20 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgKthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkKpetinyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8f69_A:Class_II_aaRS_and_biotin_synthetases;Class_II_aaRS_ABD-related; title=CRYSTAL STRUCTURE OF MURINE POLG2 DIMER BOUND TO DNA organism=Mus musculus DNA sequence DC(C1):DG(D18) DT(C2):DA(D17) DG(C3):DC(D16) DG(C4):DC(D15) DT(C5):DA(D14) DA(C6):DT(D13) DG(C7):DC(D12) DG(C8):DC(D11) DC(C9):DG(D10) DG(C10):DC(D9) DC(C11):DG(D8) DC(C12):DG(D7) DT(C13):DA(D6) DA(C14):DT(D5) DC(C15):DG(D4) DC(C16):DG(D3) DA(C17):DT(D2) DG(C18):DC(D1) chainA (255) ARG302 0 0 0 0 0 0 0 0 0 0 0 0 6 8 7 0 0 0 prot.sequence varealvdlcrrrhflsgtpqqlstaallsgcharfgplgvelrknlasqwwssmvvfreqvfavdslhqepgssqprdsafrlvspesireilqdrepskeqlvaflenllktsgklratllhgalehyvncldlvnrklpfglaqigvcfhpvtrvgekteaslvwftptrtssqwldfwlrhrllwwrkfamspsnfssadcqdelgrkgsklyysfpwgkepietlwnlgdqellhtypgnvstiqgrdgRknvvpcvlsvsgdvdlgtlaylydsfqlaensfarkkslqrkvlklhpclapikvaldvgkgptvelrqvcqgllnellengisvwpgysetvhssleqlhskydemsvlfsvlvtettlengliqlrsrdttmkemmhisklrdflvkylasasnv >8f69_AB:Class_II_aaRS_and_biotin_synthetases;Class_II_aaRS_ABD-related; title=CRYSTAL STRUCTURE OF MURINE POLG2 DIMER BOUND TO DNA organism=Mus musculus DNA sequence DC(D1):DG(C18) DT(D2):DA(C17) DG(D3):DC(C16) DG(D4):DC(C15) DT(D5):DA(C14) DA(D6):DT(C13) DG(D7):DC(C12) DG(D8):DC(C11) DC(D9):DG(C10) DG(D10):DC(C9) DC(D11):DG(C8) DC(D12):DG(C7) DT(D13):DA(C6) DA(D14):DT(C5) DC(D15):DG(C4) DC(D16):DG(C3) DA(D17):DT(C2) DG(D18):DC(C1) chainB chainA (255) ARG302 0 0 0 7 8 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence varealvdlcrrrhflsgtpqqlstaallsgcharfgplgvelrknlasqwwssmvvfreqvfavdslhqepgssqprdsafrlvspesireilqdrepskeqlvaflenllktsgklratllhgalehyvncldlvnrklpfglaqigvcfhpvtrvgekteaslvwftptrtssqwldfwlrhrllwwrkfamspsnfssadcqdelgrkgsklyysfpwgkepietlwnlgdqellhtypgnvstiqgrdgRknvvpcvlsvsgdvdlgtlaylydsfqlaensfarkkslqrkvlklhpclapikvaldvgkgptvelrqvcqgllnellengisvwpgysetvhssleqlhskydemsvlfsvlvtettlengliqlrsrdttmkemmhisklrdflvkylasasnv/ealvdlcrrrhflsgtpqqlstaallsgcharfgplgvelrknlasqwwssmvvfreqvfavdslhqepgssqprdsafrlvspesireilqdrepskeqlvaflenllktsgklratllhgalehyvncldlvnrklpfglaqigvcfhpvsvtrvgekteaslvwftptrtssqwldfwlrhrllwwrkfamspsnfssadcqdelgrkgsklyysfpwgkepietlwnlgdqellhtypgnvstiqgrdgrKnvvpcvlsvsgdvdlgtlaylydsfqlaensrkvlklhpclapikvaldvgkgptvelrqvcqgllnellengisvwpgysetvhssleqlhskydemsvlfsvlvtettlengliqlrsrdttmkemmhisklrdflvkylasasn >8f6b_ACD:Class_II_aaRS_and_biotin_synthetases;Class_II_aaRS_ABD-related; title=CRYSTAL STRUCTURE OF MURINE POLG2 HEXAMER BOUND TO DNA organism=? DNA sequence DC(J1):DG(I18) DT(J2):DA(I17) DG(J3):DC(I16) DG(J4):DC(I15) DT(J5):DA(I14) DA(J6):DT(I13) DG(J7):DC(I12) DG(J8):DC(I11) DC(J9):DG(I10) DG(J10):DC(I9) DC(J11):DG(I8) DC(J12):DG(I7) DT(J13):DA(I6) DA(J14):DT(I5) DC(J15):DG(I4) DC(J16):DG(I3) DA(J17):DT(I2) DG(J18):DC(I1) chainA chainC (304) LYS363 0 0 8 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) HIS396 0 0 0 0 3 7 9 0 0 0 0 0 0 0 0 0 0 0 chainD (253) ARG302 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 prot.sequence varealvdlcrrrhflsgtpqqlstaallsgcharfgplgvelrknlasqwwssmvvfreqvfavdslhqepgssqprdsafrlvspesireilqdrepskeqlvaflenllktsgklratllhgalehyvncldlvnrklpfglaqigvcfhpvtrvgekteaslvwftptrtssqwldfwlrhrllwwrkfamspsnfssadcqdelgrkgsklyysfpwgkepietlwnlgdqellhtypgnvstiqgrdgrknvvpcvlsvsgdvdlgtlaylydsfqlaelqrkvlklhpclapikvaldvgkgptvelrqvcqgllnellengisvwpgysetvhssleqlhskydemsvlfsvlvtettlengliqlrsrdttmkemmhisklrdflvkylasasnvaaal/varealvdlcrrrhflsgtpqqlstaallsgcharfgplgvelrknlasqwwssmvvfreqvfavdslhqepgssqprdsafrlvspesireilqdrepskeqlvaflenllktsgklratllhgalehyvncldlvnrklpfglaqigvcfhpvtrvgekteaslvwftptrtssqwldfwlrhrllwwrkfamspsnfssadcqdelgrkgsklyysfpwgkepietlwnlgdqellhtypgnvstiqgrdgrknvvpcvlsvsgdvdlgtlaylydsfqqrkvlklhpclapikvaldvgKgptvelrqvcqgllnellengisvwpgysetvHssleqlhskydemsvlfsvlvtettlengliqlrsrdttmkemmhisklrdflvkylasasnvaaal/ealvdlcrrrhflsgtpqqlstaallsgcharfgplgvelrknlasqwwssmvvfreqvfavdslhqepgssqprdsafrlvspesireilqdrepskeqlvaflenllktsgklratllhgalehyvncldlvnrklpfglaqigvcfhpvstrvgekteaslvwftptrtssqwldfwlrhrllwwrkfamspsnfssadcqdelgrkgsklyysfpwgkepietlwnlgdqellhtypgnvstiqgrdgRknvvpcvlsvsgdvdlgtlaylydsfqlaensfarkkslqrkvlklhpclapikvaldvgkgptvelrqvcqgllnellengisvwpgysetvhssleqlhskydemsvlfsvlvtettlengliqlrsrdttmkemmhisklrdflvkylasasnvaaal >8f6b_E:Class_II_aaRS_and_biotin_synthetases;Class_II_aaRS_ABD-related; title=CRYSTAL STRUCTURE OF MURINE POLG2 HEXAMER BOUND TO DNA organism=? DNA sequence DC(G1):DG(H18) DT(G2):DA(H17) DG(G3):DC(H16) DG(G4):DC(H15) DT(G5):DA(H14) DA(G6):DT(H13) DG(G7):DC(H12) DG(G8):DC(H11) DC(G9):DG(H10) DG(G10):DC(H9) DC(G11):DG(H8) DC(G12):DG(H7) DT(G13):DA(H6) DA(G14):DT(H5) DC(G15):DG(H4) DC(G16):DG(H3) DA(G17):DT(H2) DG(G18):DC(H1) chainE (255) ARG302 0 0 0 0 0 0 0 0 0 0 0 0 10 5 5 0 0 0 prot.sequence varealvdlcrrrhflsgtpqqlstaallsgcharfgplgvelrknlasqwwssmvvfreqvfavdslhqepgssqprdsafrlvspesireilqdrepskeqlvaflenllktsgklratllhgalehyvncldlvnrklpfglaqigvcfhpvtrvgekteaslvwftptrtssqwldfwlrhrllwwrkfamspsnfssadcqdelgrkgsklyysfpwgkepietlwnlgdqellhtypgnvstiqgrdgRknvvpcvlsvsgdvdlgtlaylydsfqrkvlklhpclapikvaldvgkgptvelrqvcqgllnellengisvwpgysetvhssleqlhskydemsvlfsvlvtettlengliqlrsrdttmkemmhisklrdflvkylasasnvaa >8fcj_AI: title=CRYO-EM STRUCTURE OF CASCADE-DNA (P23) COMPLEX IN TYPE I-B CAST SYSTEM organism=? DNA sequence DC(N56):DG(O10) DA(N57):DT(O9) DT(N58):DA(O8) DG(N59):DC(O7) DA(N60):DT(O6) DT(N61):DA(O5) DC(N62):DG(O4) DT(N63):DA(O3) DA(N64):DT(O2) DC(N65):DG(O1) chainA ( 78) LYS78 0 4 0 0 0 0 0 0 0 0 chainI (112) LEU116 1 6 0 0 0 0 0 0 0 0 (113) ASN117 6 7 0 0 0 0 0 0 0 0 (114) LYS118 0 4 9 4 0 0 0 0 0 0 (180) ALA184 0 0 1 0 0 0 0 0 0 0 (294) ARG298 50 0 0 0 0 0 0 0 0 0 (295) GLN299 6 1 0 0 0 0 0 0 0 0 prot.sequence miaplilyldvpfttfresharemgktypvpppatvygmllslvgetnvyrhcgvelaiamlsspkksrilrqmrrfKnadfshpenvipcyqeilsnlkcliwvrsdeekiqpslreriqlafdhpelvrrfgclflgesdqliktiklaredylegvrqwairdnrgrltlpywvdhvgsrntrflryrieemdrlsppdlawtmvqspi/tqpkislslhaadttimhrvgmtglymtlkrlekqyplsrqrgghiswfltadtielfwegsdfialswlinesfqlddtglihlvgldndridlrqkihihegicgvflrLNKfyqageiintelrfeekqveyqyksltwyahqtfaeklceadtqqlrhdyiqitswlylggivrhArtqnttkleekpeyalallfvpvvchycllhipsedlkerkphrylvvipeikdfedasqrrwrlqqletkqfhvsslgeagllyyslddiqpevayyqacqvwlyektnkasRQrtlmsieeikidknilityqqvqkyfktnyqiikykqifikvnpirsliadnlvkgihwwsnfweklviedskeylfnqlfsnregfiimaenseedkqylifikvfqqamkgnfakiyakteegkdppikkkverlraelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykp >8fcj_CDEFGHKL: title=CRYO-EM STRUCTURE OF CASCADE-DNA (P23) COMPLEX IN TYPE I-B CAST SYSTEM organism=? DNA sequence DT(N28) DA(N29) DA(N30) DC(N31) DA(N32) DG(N33) DT(N34) DG(N35) DG(N36) DC(N37) DC(N38) DT(N39) DT(N40) DA(N41) DT(N42) DT(N43) DA(N44) DA(N45) DA(N46) DT(N47) DG(N48) DA(N49) DC(N50) DT(N51) DT(N52) DC(N53) DT(N54) DC(N55) DC(N56) DA(N57) DT(N58) DG(N59) DA(N60) DT(N61) DC(N62) DT(N63) DA(N64) DC(N65) chainC ( 98) LEU109 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 98) LEU109 0 0 0 0 0 0 7 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) GLN135 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) SER167 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) THR168 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 23) ARG34 0 0 0 0 0 0 4 7 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 5 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) ARG163 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) LYS165 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) THR168 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) SER169 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) LEU170 0 0 0 16 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) HIS171 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) PHE172 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS165 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) THR168 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER169 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) LEU170 0 0 0 0 0 0 0 0 0 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) PHE172 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 22) ILE33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 14 0 0 0 0 0 0 0 0 0 0 0 0 (135) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) SER169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) PHE172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) ALA159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) PHE172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 44) ARG47 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 44) ARG47 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pnyylygtvltryglaslnhdirrgnktilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnqrmgalgmnmavsltpydgavklgaksgrekdstslhfteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdirrgnktilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnQrmgalgmnmavsltpydgavklgaksgrekdSTslhfteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLestpnqrmgalgmnmavsltpydgavklgaksgReKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnqrmgalgmnmavsltpydgavklgaksgreKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdIRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLesstpnqrmgalgmnmavsltpydgavklgaksgreKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfallesaeteedtsstpnqrmgalgmnmavsltpydgavklgAksgreKdsTsLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgle/nseedkqylifikvfqqamkgnfakiyakteegkdppikkkveRlraelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykpkd/nseedkqylifikvfqqamkgnfakiyakteegkdppikkkveRlraelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykpkd >8fcj_E: title=CRYO-EM STRUCTURE OF CASCADE-DNA (P23) COMPLEX IN TYPE I-B CAST SYSTEM organism=? DNA sequence DT(N28) DA(N29) DA(N30) DC(N31) DA(N32) DG(N33) DT(N34) DG(N35) DG(N36) DC(N37) DC(N38) DT(N39) DT(N40) DA(N41) DT(N42) DT(N43) DA(N44) DA(N45) DA(N46) DT(N47) DG(N48) DA(N49) DC(N50) DT(N51) DT(N52) DC(N53) DT(N54) DC(N55) DC(N56) DA(N57) DT(N58) DG(N59) DA(N60) DT(N61) DC(N62) DT(N63) DA(N64) DC(N65) chainE ( 23) ARG34 0 0 0 0 0 0 4 7 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 5 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) ARG163 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) LYS165 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) THR168 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) SER169 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) LEU170 0 0 0 16 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) HIS171 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) PHE172 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLestpnqrmgalgmnmavsltpydgavklgaksgReKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl >8fcu_AIJP: title=CRYO-EM STRUCTURE OF CASCADE-DNA-TNIQ-TNSC COMPLEX IN TYPE I-B CAST SYSTEM organism=? DNA sequence DG(O1):DA(N32) DT(O2):DC(N31) DA(O3):DA(N30) DG(O4):DA(N29) DA(O5):DT(N28) DT(O6):DT(N27) DC(O7):DT(N26) DA(O8):DG(N25) DT(O9):DC(N24) DG(O10):DA(N23) DG(O11):DT(N22) DA(O12):DC(N21) DA(O46):DT(N20) DT(O47):DA(N19) DA(O48):DT(N18) DT(O49):DA(N17) DA(O50):DT(N16) DT(O51):DA(N15) DC(O52):DG(N14) DT(O53):DA(N13) DA(O54):DT(N12) DC(O55):DG(N11) DG(O56):DC(N10) DC(O57):DG(N9) DG(O58):DC(N8) DT(O59):DA(N7) DA(O60):DT(N6) DG(O61):DC(N5) DA(O62):DT(N4) DT(O63):DA(N3) chainA chainI (112) LEU116 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ASN117 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) LYS118 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) ILE125 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) ARG298 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) GLN299 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 24) ALA27 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ALA31 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLU46 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG47 0 0 0 0 0 0 10 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ALA50 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP prot.sequence miaplilyldvpfttfresharemgktypvpppatvygmllslvgetnvyrhcgvelaiamlsspkksrilrqmrrfknadfshpenvipcyqeilsnlkcliwvrsdeekiqpslreriqlafdhpelvrrfgclflgesdqliktiklaredylegvrqwairdnrgrltlpywvdhvgsrntrflryrieemdrlsppdlawtmvqspi/tqpkislslhaadttimhrvgmtglymtlkrlekqyplsrqrgghiswfltadtielfwegsdfialswlinesfqlddtglihlvgldndridlrqkihihegicgvflrLNKfyqageIintelrfeekqveyqyksltwyahqtfaeklceadtqqlrhdyiqitswlylggivrhartqnttkleekpeyalallfvpvvchycllhipsedlkerkphrylvvipeikdfedasqrrwrlqqletkqfhvsslgeagllyyslddiqpevayyqacqvwlyektnkasRQrtlmsieeikidknilityqqvqkyfktnyqiikykqifikvnpirsliadnlvkgihwwsnfweklviedskeylfnqlfsnregfiimaenseedkqylifikvfqqamkgnfakiyakteegkdppikkkverlraelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykp/nseedkqylifikvfqqamkgnfAkiyAkteegkdppikkkvERlrAelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykpkd/iysehwslnpleipqrsrlfslePvavGtpyaeslssylhrlAQahCltseklvmgeiaplilkdedksellsknlshllgnsdakpaingmremteklvtvleeltmrqdlrfltllswkgmiydkglfrnyrawcpccceewmqknktiyeplswsfkdvefclihkqrlieecshcgarlpvmarlspagfcsrcygwlgqeikgeeeiekyrvniqgiselialtpqlgykpipieltrklqlillvfeqaigkdvkllgdlggimeslriasttnqsqpyhlvkliipvcekakisvfqlfgsdfkelgkilfgnfslelkl >8fcu_CDEFGHKL: title=CRYO-EM STRUCTURE OF CASCADE-DNA-TNIQ-TNSC COMPLEX IN TYPE I-B CAST SYSTEM organism=? DNA sequence DA(N3) DT(N4) DC(N5) DT(N6) DA(N7) DC(N8) DG(N9) DC(N10) DG(N11) DT(N12) DA(N13) DG(N14) DA(N15) DT(N16) DA(N17) DT(N18) DA(N19) DT(N20) DC(N21) DT(N22) DA(N23) DC(N24) DG(N25) DT(N26) DT(N27) DT(N28) DA(N29) DA(N30) DC(N31) DA(N32) DG(N33) DT(N34) DG(N35) DG(N36) DC(N37) DC(N38) DT(N39) DT(N40) DA(N41) DT(N42) DT(N43) DA(N44) DA(N45) DA(N46) DT(N47) DG(N48) DA(N49) DC(N50) DT(N51) DT(N52) DC(N53) DT(N54) DC(N55) DC(N56) DA(N57) DT(N58) DG(N59) DA(N60) DT(N61) DC(N62) DT(N63) DA(N64) DC(N65) chainC ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) LYS160 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ALA159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) PHE172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) SER169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) PHE172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 19 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) PHE172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ALA159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) PHE172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 44) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ALA50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 44) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ALA50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pnyylygtvltryglaslnhdiRrgnktilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnqrmgalgmnmavsltpydgavklgaKsgrekdstslhfteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnqrmgalgmnmavsltpydgavklgAksgreKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdiRrgNktilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLtpnqrmgalgmnmavsltpydgavklgaksgreKdsTSLHfteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnqrmgalgmnmavsltpydgavklgaksgreKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnqrmgalgmnmavsltpydgavklgaksgreKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfallpnqrmgalgmnmavsltpydgavklgAksgreKdsTsLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/nseedkqylifikvfqqamkgnfakiyakteegkdppikkkveRlrAelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykpkd/nseedkqylifikvfqqamkgnfakiyakteegkdppikkkveRlrAelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykpkd >8fcu_F: title=CRYO-EM STRUCTURE OF CASCADE-DNA-TNIQ-TNSC COMPLEX IN TYPE I-B CAST SYSTEM organism=? DNA sequence DA(N3) DT(N4) DC(N5) DT(N6) DA(N7) DC(N8) DG(N9) DC(N10) DG(N11) DT(N12) DA(N13) DG(N14) DA(N15) DT(N16) DA(N17) DT(N18) DA(N19) DT(N20) DC(N21) DT(N22) DA(N23) DC(N24) DG(N25) DT(N26) DT(N27) DT(N28) DA(N29) DA(N30) DC(N31) DA(N32) DG(N33) DT(N34) DG(N35) DG(N36) DC(N37) DC(N38) DT(N39) DT(N40) DA(N41) DT(N42) DT(N43) DA(N44) DA(N45) DA(N46) DT(N47) DG(N48) DA(N49) DC(N50) DT(N51) DT(N52) DC(N53) DT(N54) DC(N55) DC(N56) DA(N57) DT(N58) DG(N59) DA(N60) DT(N61) DC(N62) DT(N63) DA(N64) DC(N65) chainF ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) PHE172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnqrmgalgmnmavsltpydgavklgaksgreKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl >8fcw_RSTUV:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF TNSC-DNA COMPLEX IN TYPE I-B CAST SYSTEM organism=? DNA sequence DG(O56):DC(N10) DC(O57):DG(N9) DG(O58):DC(N8) DT(O59):DA(N7) DA(O60):DT(N6) DG(O61):DC(N5) DA(O62):DT(N4) DT(O63):DA(N3) DA(O64):DT(N2) DT(O65):DA(N1) DA(O66):DT(N0) DT(O67):DA(N-1) DC(O68):DG(N-2) DT(O69):DA(N-3) DA(O70):DT(N-4) DC(O71):DG(N-5) DG(O72):DC(N-6) DA(O73):DT(N-7) DT(O74):DA(N-8) DA(O75):DT(N-9) DC(O76):DG(N-10) DG(O77):DC(N-11) DT(O78):DA(N-12) DA(O79):DT(N-13) DG(O80):DC(N-14) DC(O81):DG(N-15) DG(O82):DC(N-16) DG(O83):DC(N-17) DC(O84):DG(N-18) DC(O85):DG(N-19) chainR chainS chainT (143) LYS146 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU chainV prot.sequence stgfplelltrpaterlayfenytvahprlkevyeilmrtiaepagasfifvygasgvgkttlrlrveqkltelalpklesdrarvpvvgieaiapesryfnwkeyytralitleeplidhkfdygvrgisrdnfgkinveskvvapalrralenalihrhpdvffvdeaqhfgkvasgyklqdqldclkslanmtgilhcllgtyelltfrnlsgqlsrrsvdihfrrycadspedvqafksvlltfqqhlplaetpnlvdhweyfyertlgcigtlkdwlkrvlsdaldreattitlkdlqkralsvaqcqkmfkeiqegerqlseteadvqnlrsalglg/stgfplelltrpaterlayfenytvahprlkevyeilmrtiaepagasfifvygasgvgkttlrlrveqkltelalpklesdrarvpvvgieaiapesryfnwkeyytralitleeplidhkfdygvrgisrdnfgkinveskvvapalrralenalihrhpdvffvdeaqhfgkvasgyklqdqldclkslanmtgilhcllgtyelltfrnlsgqlsrrsvdihfrrycadspedvqafksvlltfqqhlplaetpnlvdhweyfyertlgcigtlkdwlkrvlsdaldreattitlkdlqkralsvaqcqkmfkeiqegerqlseteadvqnlrsalglg/stgfplelltrpaterlayfenytvahprlkevyeilmrtiaepagasfifvygasgvgkttlrlrveqkltelalpklesdrarvpvvgieaiapesryfnwkeyytralitleeplidhkfdygvrgisrdnfgkinvesKvvapalrralenalihrhpdvffvdeaqhfgkvasgyklqdqldclkslanmtgilhcllgtyelltfrnlsgqlsrrsvdihfrrycadspedvqafksvlltfqqhlplaetpnlvdhweyfyertlgcigtlkdwlkrvlsdaldreattitlkdlqkralsvaqcqkmfkeiqegerqlseteadvqnlrsalglg/stgfplelltrpaterlayfenytvahprlkevyeilmrtiaepagasfifvygasgvgkttlrlrveqkltelalpklesdrarvpvvgieaiapesryfnwkeyytralitleeplidhkfdygvrgisrdnfgkinvesKvvapalrralenalihrhpdvffvdeaqhfgkvasgyklqdqldclkslanmtgilhcllgtyelltfrnlsgqlsrrsvdihfrrycadspedvqafksvlltfqqhlplaetpnlvdhweyfyertlgcigtlkdwlkrvlsdaldreattitlkdlqkralsvaqcqkmfkeiqegerqlseteadvqnlrsalglg/stgfplelltrpaterlayfenytvahprlkevyeilmrtiaepagasfifvygasgvgkttlrlrveqkltelalpklesdrarvpvvgieaiapesryfnwkeyytralitleeplidhkfdygvrgisrdnfgkinvesKvvapalrralenalihrhpdvffvdeaqhfgkvasgyklqdqldclkslanmtgilhcllgtyelltfrnlsgqlsrrsvdihfrrycadspedvqafksvlltfqqhlplaetpnlvdhweyfyertlgcigtlkdwlkrvlsdaldreattitlkdlqkralsvaqcqkmfkeiqegerqlseteadvqnlrsalglg >8fd3_A: title=CRYO-EM STRUCTURE OF CASCADE-PAM COMPLEX IN TYPE I-B CAST SYSTEM organism=? DNA sequence DG(O1):DC(N65) DT(O2):DA(N64) DA(O3):DT(N63) DG(O4):DC(N62) DA(O5):DT(N61) DT(O6):DA(N60) DC(O7):DG(N59) DA(O8):DT(N58) DT(O9):DA(N57) DG(O10):DC(N56) chainA ( 78) LYS78 0 0 0 0 0 0 0 0 4 0 prot.sequence miaplilyldvpfttfresharemgktypvpppatvygmllslvgetnvyrhcgvelaiamlsspkksrilrqmrrfKnadfshpenvipcyqeilsnlkcliwvrsdeekiqpslreriqlafdhpelvrrfgclflgesdqliktiklaredylegvrqwairdnrgrltlpywvdhvgsrntrflryrieemdrlsppdlawtmvqspi >8fd3_AI: title=CRYO-EM STRUCTURE OF CASCADE-PAM COMPLEX IN TYPE I-B CAST SYSTEM organism=? DNA sequence DG(O1):DC(N65) DT(O2):DA(N64) DA(O3):DT(N63) DG(O4):DC(N62) DA(O5):DT(N61) DT(O6):DA(N60) DC(O7):DG(N59) DA(O8):DT(N58) DT(O9):DA(N57) DG(O10):DC(N56) chainA ( 78) LYS78 0 0 0 0 0 0 0 0 4 0 chainI (112) LEU116 0 0 0 0 0 0 0 0 6 1 (113) ASN117 0 0 0 0 0 0 0 0 5 4 (114) LYS118 0 0 0 0 0 0 4 10 3 0 (180) ALA184 0 0 0 0 0 0 0 1 0 0 (294) ARG298 0 0 0 0 0 0 0 0 0 52 (295) GLN299 0 0 0 0 0 0 0 0 0 6 prot.sequence miaplilyldvpfttfresharemgktypvpppatvygmllslvgetnvyrhcgvelaiamlsspkksrilrqmrrfKnadfshpenvipcyqeilsnlkcliwvrsdeekiqpslreriqlafdhpelvrrfgclflgesdqliktiklaredylegvrqwairdnrgrltlpywvdhvgsrntrflryrieemdrlsppdlawtmvqspi/tqpkislslhaadttimhrvgmtglymtlkrlekqyplsrqrgghiswfltadtielfwegsdfialswlinesfqlddtglihlvgldndridlrqkihihegicgvflrLNKfyqageiintelrfeekqveyqyksltwyahqtfaeklceadtqqlrhdyiqitswlylggivrhArtqnttkleekpeyalallfvpvvchycllhipsedlkerkphrylvvipeikdfedasqrrwrlqqletkqfhvsslgeagllyyslddiqpevayyqacqvwlyektnkasRQrtlmsieeikidknilityqqvqkyfktnyqiikykqifikvnpirsliadnlvkgihwwsnfweklviedskeylfnqlfsnregfiimaenseedkqylifikvfqqamkgnfakiyakteegkdppikkkverlraelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykp >8ff4_AIJPRSW:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF CASCADE-DNA-TNIQ-TNSC COMPLEX (COMPOSITE) IN TYPE I-B CAST SYSTEM organism=? DNA sequence DG(O1):DA(N32) DT(O2):DC(N31) DA(O3):DA(N30) DG(O4):DA(N29) DA(O5):DT(N28) DT(O6):DT(N27) DC(O7):DT(N26) DA(O8):DG(N25) DT(O9):DC(N24) DG(O10):DA(N23) DG(O11):DT(N22) DA(O12):DC(N21) DA(O46):DT(N20) DT(O47):DA(N19) DA(O48):DT(N18) DT(O49):DA(N17) DA(O50):DT(N16) DT(O51):DA(N15) DC(O52):DG(N14) DT(O53):DA(N13) DA(O54):DT(N12) DC(O55):DG(N11) DG(O56):DC(N10) DC(O57):DG(N9) DG(O58):DC(N8) DT(O59):DA(N7) DA(O60):DT(N6) DG(O61):DC(N5) DA(O62):DT(N4) DT(O63):DA(N3) DA(O64):DT(N2) DT(O65):DA(N1) DA(O66):DT(N0) DT(O67):DA(N-1) DC(O68):DG(N-2) DT(O69):DA(N-3) DA(O70):DT(N-4) DC(O71):DG(N-5) DG(O72):DC(N-6) DA(O73):DT(N-7) DT(O74):DA(N-8) DA(O75):DT(N-9) DC(O76):DG(N-10) DG(O77):DC(N-11) DT(O78):DA(N-12) DA(O79):DT(N-13) DG(O80):DC(N-14) DC(O81):DG(N-15) DG(O82):DC(N-16) DG(O83):DC(N-17) DC(O84):DG(N-18) DC(O85):DG(N-19) chainA chainI (112) LEU116 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ASN117 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) LYS118 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) ILE125 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (294) ARG298 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) GLN299 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 24) ALA27 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ALA31 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) GLU46 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG47 0 0 0 0 0 0 10 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ALA50 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP chainR chainS chainW prot.sequence miaplilyldvpfttfresharemgktypvpppatvygmllslvgetnvyrhcgvelaiamlsspkksrilrqmrrfknadfshpenvipcyqeilsnlkcliwvrsdeekiqpslreriqlafdhpelvrrfgclflgesdqliktiklaredylegvrqwairdnrgrltlpywvdhvgsrntrflryrieemdrlsppdlawtmvqspi/tqpkislslhaadttimhrvgmtglymtlkrlekqyplsrqrgghiswfltadtielfwegsdfialswlinesfqlddtglihlvgldndridlrqkihihegicgvflrLNKfyqageIintelrfeekqveyqyksltwyahqtfaeklceadtqqlrhdyiqitswlylggivrhartqnttkleekpeyalallfvpvvchycllhipsedlkerkphrylvvipeikdfedasqrrwrlqqletkqfhvsslgeagllyyslddiqpevayyqacqvwlyektnkasRQrtlmsieeikidknilityqqvqkyfktnyqiikykqifikvnpirsliadnlvkgihwwsnfweklviedskeylfnqlfsnregfiimaenseedkqylifikvfqqamkgnfakiyakteegkdppikkkverlraelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykp/nseedkqylifikvfqqamkgnfAkiyAkteegkdppikkkvERlrAelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykpkd/iysehwslnpleipqrsrlfslePvavGtpyaeslssylhrlAQahCltseklvmgeiaplilkdedksellsknlshllgnsdakpaingmremteklvtvleeltmrqdlrfltllswkgmiydkglfrnyrawcpccceewmqknktiyeplswsfkdvefclihkqrlieecshcgarlpvmarlspagfcsrcygwlgqeikgeeeiekyrvniqgiselialtpqlgykpipieltrklqlillvfeqaigkdvkllgdlggimeslriasttnqsqpyhlvkliipvcekakisvfqlfgsdfkelgkilfgnfslelkl/stgfplelltrpaterlayfenyTvahPrlkevyeilmrtiaEPagAsfifvygasgvgkttlrlrveqkltelalpklesdrarvpvvgieaiapesryfnwkeyytralitleeplidhkfdygvrgisrdnfgkinveskvvapalrralenalihrhpdvffvdeaqhfgkvasgyklqdqldclkslanmtgilhcllgtyelltfrnlsgqlsrrsvdihfrrycadspedvqafksvlltfqqhlplaetpnlvdhweyfyertlgcigtlkdwlkrvlsdaldreattitlkdlqkralsvaqcqkmfkeiqegerqlseteadvqnlrsalglg/stgfplelltrpaterlayfenyTvahPrlkevyeilmrtiaEPagAsfifvygasgvgkttlrlrveqkltelalpklesdrarvpvvgieaiapesryfnwkeyytralitleeplidhkfdygvrgisrdnfgkinveskvvapalrralenalihrhpdvffvdeaqhfgkvasgyklqdqldclkslanmtgilhcllgtyelltfrnlsgqlsrrsvdihfrrycadspedvqafksvlltfqqhlplaetpnlvdhweyfyertlgcigtlkdwlkrvlsdaldreattitlkdlqkralsvaqcqkmfkeiqegerqlseteadvqnlrsalglg/stgfplelltrpaterlayfenyTvahPrlkevyeilmrtiaEPagAsfifvygasgvgkttlrlrveqkltelalpklesdrarvpvvgieaiapesryfnwkeyytralitleeplidhkfdygvrgisrdnfgkinveskvvapalrralenalihrhpdvffvdeaqhfgkvasgyklqdqldclkslanmtgilhcllgtyelltfrnlsgqlsrrsvdihfrrycadspedvqafksvlltfqqhlplaetpnlvdhweyfyertlgcigtlkdwlkrvlsdaldreattitlkdlqkralsvaqcqkmfkeiqegerqlseteadvqnlrsalglg >8ff4_L: title=CRYO-EM STRUCTURE OF CASCADE-DNA-TNIQ-TNSC COMPLEX (COMPOSITE) IN TYPE I-B CAST SYSTEM organism=? DNA sequence DG(N-19) DG(N-18) DC(N-17) DC(N-16) DG(N-15) DC(N-14) DT(N-13) DA(N-12) DC(N-11) DG(N-10) DT(N-9) DA(N-8) DT(N-7) DC(N-6) DG(N-5) DT(N-4) DA(N-3) DG(N-2) DA(N-1) DT(N0) DA(N1) DT(N2) DA(N3) DT(N4) DC(N5) DT(N6) DA(N7) DC(N8) DG(N9) DC(N10) DG(N11) DT(N12) DA(N13) DG(N14) DA(N15) DT(N16) DA(N17) DT(N18) DA(N19) DT(N20) DC(N21) DT(N22) DA(N23) DC(N24) DG(N25) DT(N26) DT(N27) DT(N28) DA(N29) DA(N30) DC(N31) DA(N32) DG(N33) DT(N34) DG(N35) DG(N36) DC(N37) DC(N38) DT(N39) DT(N40) DA(N41) DT(N42) DT(N43) DA(N44) DA(N45) DA(N46) DT(N47) DG(N48) DA(N49) DC(N50) DT(N51) DT(N52) DC(N53) DT(N54) DC(N55) DC(N56) DA(N57) DT(N58) DG(N59) DA(N60) DT(N61) DC(N62) DT(N63) DA(N64) DC(N65) chainL ( 44) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ALA50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nseedkqylifikvfqqamkgnfakiyakteegkdppikkkveRlrAelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykpkd >8ff5_AIJ: title=CRYO-EM STRUCTURE OF CASCADE-DNA-FULLRLOOP IN TYPE I-B CAST SYSTEM organism=? DNA sequence DA(N46):DT(O53) DT(N47):DC(O52) DG(N48):DT(O51) DA(N49):DA(O50) DC(N50):DT(O49) DT(N51):DA(O48) DT(N52):DT(O47) DC(N53):DA(O46) DT(N54):DA(O12) DC(N55):DG(O11) DC(N56):DG(O10) DA(N57):DT(O9) DT(N58):DA(O8) DG(N59):DC(O7) DA(N60):DT(O6) DT(N61):DA(O5) DC(N62):DG(O4) DT(N63):DA(O3) DA(N64):DT(O2) DC(N65):DG(O1) chainA ( 78) LYS78 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 ( 90) PRO90 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 chainI (112) LEU116 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 (113) ASN117 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 (114) LYS118 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 (121) ILE125 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (138) LYS142 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (180) ALA184 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (289) THR293 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (290) ASN294 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (294) ARG298 0 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 (295) GLN299 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 chainJ ( 24) ALA27 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ALA31 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence miaplilyldvpfttfresharemgktypvpppatvygmllslvgetnvyrhcgvelaiamlsspkksrilrqmrrfKnadfshpenviPcyqeilsnlkcliwvrsdeekiqpslreriqlafdhpelvrrfgclflgesdqliktiklaredylegvrqwairdnrgrltlpywvdhvgsrntrflryrieemdrlsppdlawtmvqspi/tqpkislslhaadttimhrvgmtglymtlkrlekqyplsrqrgghiswfltadtielfwegsdfialswlinesfqlddtglihlvgldndridlrqkihihegicgvflrLNKfyqageIintelrfeekqveyqyKsltwyahqtfaeklceadtqqlrhdyiqitswlylggivrhArtqnttkleekpeyalallfvpvvchycllhipsedlkerkphrylvvipeikdfedasqrrwrlqqletkqfhvsslgeagllyyslddiqpevayyqacqvwlyekTNkasRQrtlmsieeikidknilityqqvqkyfktnyqiikykqifikvnpirsliadnlvkgihwwsnfweklviedskeylfnqlfsnregfiimaenseedkqylifikvfqqamkgnfakiyakteegkdppikkkverlraelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykp/nseedkqylifikvfqqamkgnfAkiyAkteegkdppikkkverlraelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykpkd >8ff5_CDEFGHKL: title=CRYO-EM STRUCTURE OF CASCADE-DNA-FULLRLOOP IN TYPE I-B CAST SYSTEM organism=? DNA sequence DA(N13) DG(N14) DA(N15) DT(N16) DA(N17) DT(N18) DA(N19) DT(N20) DC(N21) DT(N22) DA(N23) DC(N24) DG(N25) DT(N26) DT(N27) DT(N28) DA(N29) DA(N30) DC(N31) DA(N32) DG(N33) DT(N34) DG(N35) DG(N36) DC(N37) DC(N38) DT(N39) DT(N40) DA(N41) DT(N42) DT(N43) DA(N44) DA(N45) DA(N46) DT(N47) DG(N48) DA(N49) DC(N50) DT(N51) DT(N52) DC(N53) DT(N54) DC(N55) DC(N56) DA(N57) DT(N58) DG(N59) DA(N60) DT(N61) DC(N62) DT(N63) DA(N64) DC(N65) chainC ( 23) ARG34 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) LYS160 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ALA159 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS165 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER169 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 17 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) PHE172 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) SER169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) PHE172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 98) LEU109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 22 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) SER169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) PHE172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 23) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASN37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) THR39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (125) ALA159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) LYS165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) THR168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) LEU170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) PHE172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 44) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ALA50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 44) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ALA50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pnyylygtvltryglaslnhdiRrgnktilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnqrmgalgmnmavsltpydgavklgaKsgrekdstslhfteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnqrmgalgmnmavsltpydgavklgAksgreKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdiRrgNktilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLtpnqrmgalgmnmavsltpydgavklgaksgreKdsTSLHfteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnqrmgalgmnmavsltpydgavklgaksgreKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnqrmgalgmnmavsltpydgavklgaksgreKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfallpnqrmgalgmnmavsltpydgavklgAksgreKdsTsLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl/nseedkqylifikvfqqamkgnfakiyakteegkdppikkkveRlrAelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykpkd/nseedkqylifikvfqqamkgnfakiyakteegkdppikkkveRlrAelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykpkd >8ff5_I: title=CRYO-EM STRUCTURE OF CASCADE-DNA-FULLRLOOP IN TYPE I-B CAST SYSTEM organism=? DNA sequence DG(O1):DC(N65) DT(O2):DA(N64) DA(O3):DT(N63) DG(O4):DC(N62) DA(O5):DT(N61) DT(O6):DA(N60) DC(O7):DG(N59) DA(O8):DT(N58) DT(O9):DA(N57) DG(O10):DC(N56) DG(O11):DC(N55) DA(O12):DT(N54) DA(O46):DC(N53) DT(O47):DT(N52) DA(O48):DT(N51) DT(O49):DC(N50) DA(O50):DA(N49) DT(O51):DG(N48) DC(O52):DT(N47) DT(O53):DA(N46) chainI (112) LEU116 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 (113) ASN117 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 0 (114) LYS118 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 (121) ILE125 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (138) LYS142 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 (180) ALA184 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (289) THR293 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (290) ASN294 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (294) ARG298 0 0 0 0 0 0 0 0 0 76 0 0 0 0 0 0 0 0 0 0 (295) GLN299 0 0 0 0 0 0 0 0 1 16 0 0 0 0 0 0 0 0 0 0 prot.sequence tqpkislslhaadttimhrvgmtglymtlkrlekqyplsrqrgghiswfltadtielfwegsdfialswlinesfqlddtglihlvgldndridlrqkihihegicgvflrLNKfyqageIintelrfeekqveyqyKsltwyahqtfaeklceadtqqlrhdyiqitswlylggivrhArtqnttkleekpeyalallfvpvvchycllhipsedlkerkphrylvvipeikdfedasqrrwrlqqletkqfhvsslgeagllyyslddiqpevayyqacqvwlyekTNkasRQrtlmsieeikidknilityqqvqkyfktnyqiikykqifikvnpirsliadnlvkgihwwsnfweklviedskeylfnqlfsnregfiimaenseedkqylifikvfqqamkgnfakiyakteegkdppikkkverlraelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykp >8ffi_AB:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=STRUCTURE OF TETRAMERIZED MAPSPARTA UPON GUIDE RNA-MEDIATED TARGET DNA BINDING organism=? DNA sequence DC(D4) DT(D5) DA(D6) DA(D7) DT(D8) DA(D9) DG(D10) DA(D11) DT(D12) DT(D13) DA(D14) DG(D15) DA(D16) DG(D17) DC(D18) DC(D19) DG(D20) DT(D21) DC(D22) DA(D23) chainA (262) ARG263 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 (361) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 chainB (209) LYS247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (353) THR391 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (397) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtiskTkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ffi_E:Toll/Interleukin_receptor_TIR_domain; title=STRUCTURE OF TETRAMERIZED MAPSPARTA UPON GUIDE RNA-MEDIATED TARGET DNA BINDING organism=? DNA sequence DC(H4) DT(H5) DA(H6) DA(H7) DT(H8) DA(H9) DG(H10) DA(H11) DT(H12) DT(H13) DA(H14) DG(H15) DA(H16) DG(H17) DC(H18) DC(H19) DG(H20) DT(H21) DC(H22) DA(H23) chainE (262) ARG263 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 (361) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe >8ffi_EF:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=STRUCTURE OF TETRAMERIZED MAPSPARTA UPON GUIDE RNA-MEDIATED TARGET DNA BINDING organism=? DNA sequence DC(H4) DT(H5) DA(H6) DA(H7) DT(H8) DA(H9) DG(H10) DA(H11) DT(H12) DT(H13) DA(H14) DG(H15) DA(H16) DG(H17) DC(H18) DC(H19) DG(H20) DT(H21) DC(H22) DA(H23) chainE (262) ARG263 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 (361) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 chainF (209) LYS247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (290) TYR328 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ffi_IL:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=STRUCTURE OF TETRAMERIZED MAPSPARTA UPON GUIDE RNA-MEDIATED TARGET DNA BINDING organism=? DNA sequence DC(K4) DT(K5) DA(K6) DA(K7) DT(K8) DA(K9) DG(K10) DA(K11) DT(K12) DT(K13) DA(K14) DG(K15) DA(K16) DG(K17) DC(K18) DC(K19) DG(K20) DT(K21) DC(K22) DA(K23) chainI (262) ARG263 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 (361) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 chainL (209) LYS247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (290) TYR328 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (397) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ffi_L:Ribonuclease_H-like; title=STRUCTURE OF TETRAMERIZED MAPSPARTA UPON GUIDE RNA-MEDIATED TARGET DNA BINDING organism=? DNA sequence DC(K4) DT(K5) DA(K6) DA(K7) DT(K8) DA(K9) DG(K10) DA(K11) DT(K12) DT(K13) DA(K14) DG(K15) DA(K16) DG(K17) DC(K18) DC(K19) DG(K20) DT(K21) DC(K22) DA(K23) chainL (209) LYS247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (290) TYR328 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (397) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ffi_MN:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=STRUCTURE OF TETRAMERIZED MAPSPARTA UPON GUIDE RNA-MEDIATED TARGET DNA BINDING organism=? DNA sequence DC(P4) DT(P5) DA(P6) DA(P7) DT(P8) DA(P9) DG(P10) DA(P11) DT(P12) DT(P13) DA(P14) DG(P15) DA(P16) DG(P17) DC(P18) DC(P19) DG(P20) DT(P21) DC(P22) DA(P23) chainM (262) ARG263 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 (361) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainN ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfskieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ffz_ABCEH: title=TFIIIA-TFIIIC-BRF1-TBP COMPLEX BOUND TO 5S RRNA GENE organism=? DNA sequence DT(I1):DA(J151) DC(I2):DG(J150) DA(I3):DT(J149) DT(I4):DA(J148) DA(I5):DT(J147) DT(I6):DA(J146) DC(I7):DG(J145) DA(I8):DT(J144) DC(I9):DG(J143) DC(I10):DG(J142) DT(I11):DA(J141) DG(I12):DC(J140) DC(I13):DG(J139) DG(I14):DC(J138) DT(I15):DA(J137) DT(I16):DA(J136) DT(I17):DA(J135) DC(I18):DG(J134) DC(I19):DG(J133) DG(I20):DC(J132) DT(I21):DA(J131) DT(I22):DA(J130) DA(I23):DT(J129) DA(I24):DT(J128) DA(I25):DT(J127) DC(I26):DG(J126) DT(I27):DA(J125) DA(I28):DT(J124) DT(I29):DA(J123) DC(I30):DG(J122) DG(I31):DC(J121) DG(I32):DC(J120) DT(I33):DA(J119) DT(I34):DA(J118) DG(I35):DC(J117) DC(I36):DG(J116) DG(I37):DC(J115) DG(I38):DC(J114) DC(I39):DG(J113) DC(I40):DG(J112) DA(I41):DT(J111) DT(I42):DA(J110) DA(I43):DT(J109) DT(I44):DA(J108) DC(I45):DG(J107) DT(I46):DA(J106) DA(I47):DT(J105) DC(I48):DG(J104) DC(I49):DG(J103) DA(I50):DT(J102) DG(I51):DC(J101) DA(I52):DT(J100) DA(I53):DT(J99) DA(I54):DT(J98) DG(I55):DC(J97) DC(I56):DG(J96) DC(I58):DG(J94) DC(I59):DG(J93) DG(I60):DC(J92) DT(I61):DA(J91) DT(I62):DA(J90) DT(I63):DA(J89) DC(I64):DG(J88) DC(I65):DG(J87) DC(I66):DG(J86) DG(I67):DC(J85) DT(I68):DA(J84) DC(I69):DG(J83) DC(I70):DG(J82) DG(I71):DC(J81) DA(I72):DT(J80) DT(I73):DA(J79) DC(I74):DG(J78) DA(I75):DT(J77) DA(I76):DT(J76) DC(I77):DG(J75) DT(I78):DA(J74) DG(I79):DC(J73) DT(I80):DA(J72) DA(I81):DT(J71) DG(I82):DC(J70) DT(I83):DA(J69) DT(I84):DA(J68) DA(I85):DT(J67) DA(I86):DT(J66) DG(I87):DC(J65) DC(I88):DG(J64) DG(I90):DC(J62) DG(I91):DC(J61) DT(I92):DA(J60) DA(I93):DT(J59) DA(I94):DT(J58) DG(I95):DC(J57) DA(I96):DT(J56) DG(I97):DC(J55) DC(I98):DG(J54) DC(I99):DG(J53) DT(I100):DA(J52) DG(I101):DC(J51) DA(I102):DT(J50) DC(I103):DG(J49) DC(I104):DG(J48) DG(I105):DC(J47) DA(I106):DT(J46) DG(I107):DC(J45) DT(I108):DA(J44) DA(I109):DT(J43) DG(I110):DC(J42) DT(I111):DA(J41) DG(I112):DC(J40) DT(I113):DA(J39) DA(I114):DT(J38) DG(I115):DC(J37) DT(I116):DA(J36) DG(I117):DC(J35) DG(I118):DC(J34) DG(I119):DC(J33) DT(I120):DA(J32) DG(I121):DC(J31) DA(I122):DT(J30) DC(I123):DG(J29) DC(I124):DG(J28) DA(I125):DT(J27) DT(I126):DA(J26) DA(I127):DT(J25) DC(I128):DG(J24) DG(I129):DC(J23) DC(I130):DG(J22) DG(I131):DC(J21) DA(I132):DT(J20) DA(I133):DT(J19) DA(I134):DT(J18) DC(I135):DG(J17) DT(I136):DA(J16) DC(I137):DG(J15) DA(I138):DT(J14) DG(I139):DC(J13) DG(I140):DC(J12) DT(I141):DA(J11) DG(I142):DC(J10) DC(I143):DG(J9) DT(I144):DA(J8) DG(I145):DC(J7) DC(I146):DG(J6) DA(I147):DT(J5) DA(I148):DT(J4) DT(I149):DA(J3) DC(I150):DG(J2) DT(I151):DA(J1) chainA ( 2) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 16 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) SER64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) LYS91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) SER93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) HIS94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) ARG97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) GLN121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) GLN122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) PRO149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ARG152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) GLN173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) ARG174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 17 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) TYR176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (134) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 13 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ARG374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC (613) ARG841 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 7) LYS161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 81) GLN257 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ASN395 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) VAL397 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) PHE425 0 0 0 0 0 0 0 0 47 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) LEU440 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) VAL448 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) ASN485 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) VAL487 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) PHE516 0 0 18 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (252) PRO517 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (266) LEU531 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (268) PHE533 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (274) VAL539 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nRpktyfcdydgcdkaftRpSiltehqlsvhqglrafqcdkcaksfvKkSHleRhlythsdtkpfqcsycgkgvttrQQlkrhevthtksficpeegcnlrfykhPqlRahilsvhlhkltcphcnksfQRpYRlrnhiskhhdpevenpyqctfagcckefriwsqlqshikndhpklkcpicskpcvgenglqmhmiihddslvtknwkchicpdmsfsrkhdllthygsihteediplelkykisnnnveflqnevdlekrlesgenglnlllntvgrkyrcfynncsRtfktkekyekhidkhkvhelkl/mVltiypdelvqivsdkiAsNkgkitlnqlwdisgkyfdlsdkkvkqFvLScvIlkkdievycdgaittknvtdiigDAnhsysvgitedslwtlltgytkkestIgnSafelllevaksgekgintmdLAqVTgqdprsvtgrikkinhlltssqliykghvvkqlklkkfinirdhlativevvkrskngirqiidlkrelkfdkekrlskafiaaiawldekeylkkvlvvspknpaikircvkyvkdipdnfnatdllqnqglvmeekevllnrfyplqnqtydiadKsglkgistmdvvnritgkefqraftksseyylesvgyrlfriydfegkkkffrlftaqnfqkltnpkgfdelgksrtdlktlnednfvalnntvrfttdsdgqdiffwhgerslrslqrqrailkvmntiggvaylreqfyesvskymgstttldkktvrgdvdlmveseklgartepvsgrkiiflptvgedaiqryilkekdskkatftdvihdteiyfkdgvqaliravvvtksikneimwdkitklfpnnsldnlkkkwtarrvrmghsgwrayvdkwkkmlvlaiksekislrdveeldliklldiwtsfdekeikrplflyknyeenrkkftlvrdmssmiqreisslkktytrkisastkdlsksqsddyirtvirsiliesneiealknvgnesidnvimdmakekqiylhgsklectdtlpdilenrgnykdfgvafqyrckvnelleagnaivinqepsdisswvlidlisgellnmdvipmveirtltppliiyansqtklntarksavkvplgkpfsrlwvngsgsirpniwkqvvtmvvneiifhpgitlsrlqsrcrevlslheiseickwllerqvlittdfdgywvnhnwysiyest/evaqllsqaneafvrndlqvaerlfnevikkdarnfaayetlgdiyqlqgrlndccnswflaahlnasdwefwkivailsadldhvrqaiycfsrvislnpmewesiyrrsmlykktgqlaraldgfqrlymynpydanilrelailyvdydriedsielymkvfnanverreailaalenaldsdedrqmfpdinwkkidakykcipfdwsslnilaelflklavsevdgiktikkcarwiqrresqtfwdhvpddsefdnrrfknstfdsllaaekeksynipidirvrlgllrlntdnlvealnhfqclydetfsdvadlyfeaataltraekykeaidfftpllsleewrttdvfkplarcykeiesyetakefyelaiksepddldirvslaevyyrlndpetfkhmlvdvvemrkhqvdetlhraereriererritakvvdkyekmkkfelneakqasiwintvselvdifssvknffmkeervtltsatelrglsyeqwfelfmelslviakyqsvedglsvvetaqevnvffqdpervkmmkfvklaivlqmddeeelaenlrgllnqfqfnrkvlqvfmyslcrgpsslnilsstiqqkfflRqlkafdscryntevngqasitnkevynpnkksspylyyiyavllyssrgflsalqyltrleedipddpmvnllmglshihramqrltaqrhfqifhglrylyryhkirkslytdlekqeadynlgrafhliglvsiaieyynrvlenyddgklkkhaaynsiiiyqqsgnveladhlmekylsi/rpirllKdlssardkieriyglnkekllllakvkegfetsvfdfpfkniqpdspyfvcldppckkesaynkvigdknrtvyheinktefenmiklrtkrlklligevdaevstgdkiefpvlangkrrgfiynvgglvtdiawlnieentdigkdiqylavavsqymdeplnehlemfdkekhssciqifkmntstlhcvkvqtivhsfgevwdlkwhegchaphlvgclsfvsqegtinfleiidnatdvhvfkmcekpsltlsladslittfdflspttvvcgfkngfvaefdltdpevpsfydqvhdsyilsvstaysdfedtvvstvavdgyfyifnpkdiattkttvsrfrgsnlvpvvycpqiysyiysdgasslravpsraafavhplvsrettitaigvsrlhpmvlagsadgsliitnaarrllhgiknssatqkslrlwkwdysikddkyridssyevypltvndvskakidahginitctkwnetsaggkcyafsnsaglltleyls/dpslfiqhfaekldladkkikvvkdavklaqrmskdwmfegrrpagiagacillacrmnnlrrthteivavshvaeetlqQrlnefkntkaaklsvqkfrendvedgearppsfvknrkkesgivptlqNiVatvtlgcrldlktvalharnaeynpkrFaavimrirepkttaLifasgkmVvtgakseddsklasrkyariiqkigfaakftdfkiqNiVgscdvkfpirleglafshgtfssyepelFPgliyrmvkpkivlLiFvsgkiVltgakqreeiyqafeaiypvlsefrkmsgsprnlhllpttdtylskvsddpdnl >8fii_B:Cytidine_deaminase-like; title=WILD TYPE APOBEC3A IN COMPLEX WITH TT(FDZ)-HAIRPIN INHIBITOR (CRYSTAL FORM 1) organism=Homo sapiens DNA sequence DG(E-6):DC(E4) DC(E-5):DG(E3) DG(E-4):DC(E2) DC(E-3):DG(E1) DT(E-2) DT(E-1) chainB ( 19) ARG28 0 0 0 0 31 0 ( 20) HIS29 0 0 0 39 6 0 ( 81) TRP98 0 0 0 0 0 9 (113) TYR130 0 0 0 0 0 4 (114) ASP131 0 0 0 0 0 11 (115) TYR132 0 0 0 0 0 4 prot.sequence rhlmdphiftsnfnngigRHktylcyeverldqhrgflhnqaknllcgfygrhaelrfldlvpslqldpaqiyrvtwfisWspcfswgcagevraflqenthvrlrifaariYDYdplykealqmlrdagaqvsimtydefkhcwdtfvdhqgcpfqpwdgldehsqalsgrlrailqn >8fij_B:Cytidine_deaminase-like; title=WILD TYPE APOBEC3A IN COMPLEX WITH TT(FDZ)-HAIRPIN INHIBITOR (CRYSTAL FORM 2) organism=Homo sapiens DNA sequence DC(E4) DG(E-6):DC(E4) DC(E-5):DG(E3) DG(E-4):DC(E2) DC(E-3):DG(E1) DT(E-2) DT(E-1) chainB ( 19) ARG28 0 0 0 0 0 29 0 ( 20) HIS29 0 0 0 0 34 6 0 ( 88) TRP98 0 0 0 0 0 0 10 (120) TYR130 0 0 0 0 0 0 5 (121) ASP131 0 0 0 0 0 0 13 (122) TYR132 0 0 0 0 0 0 2 prot.sequence rhlmdphiftsnfnngigRHktylcyeverldngtsvkmqhrgflhnqaknllcgfygrhaelrfldlvpslqldpaqiyrvtwfisWspcfswgcagevraflqenthvrlrifaariYDYdplykealqmlrdagaqvsimtydefkhcwdtfvdhqgcpfqpwdgldehsqalsgrlrailqn >8fik_A:Cytidine_deaminase-like; title=APOBEC3A E72A INACTIVE MUTANT IN COMPLEX WITH ATTC-HAIRPIN DNA SUBSTRATE organism=Homo sapiens DNA sequence DC(D-8):DG(D5) DC(D-7):DG(D4) DA(D-6):DT(D3) DT(D-5):DA(D2) DC(D-4):DG(D1) chainA ( 20) HIS29 0 0 0 0 38 prot.sequence rhlmdphiftsnfnngigrHktylcyeverldngtsvkmdqhrgflhnqaknllcgfygrhaalrfldlvpslqldpaqiyrvtwfiswspcfswgcagevraflqenthvrlrifaariydydplykealqmlrdagaqvsimtydefkhcwdtfvdhqgcpfqpwdgldehsqalsgrlrailqn >8fil_B:Cytidine_deaminase-like; title=ZINC-FREE APOBEC3A (INACTIVE E72A MUTANT) IN COMPLEX WITH TTC-HAIRPIN DNA SUBSTRATE organism=Homo sapiens DNA sequence DT(E-7):DT(E5) DG(E-6):DC(E4) DC(E-5):DG(E3) DG(E-4):DC(E2) DC(E-3):DG(E1) chainB ( 20) HIS29 0 0 0 0 37 prot.sequence rhlmdphiftsnfnngigrHktylcyeverldngtsvqhrgflhnqaknllcgfygrhaalrfldlvpslqldpaqiyrvtwfiswspcfswgcagevraflqenthvrlrifaariydydplykealqmlrdagaqvsimtydefkhcwdtfvdhqgcpfqpwdgldehsqalsgrlrailqn >8fim_A:Cytidine_deaminase-like; title=STRUCTURE OF APOBEC3A (E72A INACTIVE MUTANT) IN COMPLEX WITH TTC- HAIRPIN DNA SUBSTRATE organism=Homo sapiens DNA sequence DT(C-7):DT(C5) DG(C-6):DC(C4) DC(C-5):DG(C3) DG(C-4):DC(C2) DC(C-3):DG(C1) chainA ( 20) HIS29 0 0 0 0 37 prot.sequence rhlmdphiftsnfnngigrHktylcyeverldngtsvkmdqhrgflhnqaknllcgfygrhaalrfldlvpslqldpaqiyrvtwfiswspcfswgcagevraflqenthvrlrifaariydydplykealqmlrdagaqvsimtydefkhcwdtfvdhqgcpfqpwdgldehsqalsgrlrailqn >8fix_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF E. COLI RNA POLYMERASE BACKTRACKED ELONGATION COMPLEX HARBORING A TERMINAL MISMATCH organism=? DNA sequence DC(N11):DG(T13) DA(N12):DT(T12) DA(N13):DT(T11) DC(N14):DG(T10) DG(N15):DC(T9) DC(N16):DG(T8) DA(N17):DT(T7) DT(N18):DA(T6) DA(N19):DT(T5) DC(N21):DG(T3) DC(N22):DG(T2) DC(N23):DG(T1) chainC (162) LYS163 0 0 0 1 0 0 0 0 0 0 0 0 (541) ARG542 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgKthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >8fix_CD: title=CRYO-EM STRUCTURE OF E. COLI RNA POLYMERASE BACKTRACKED ELONGATION COMPLEX HARBORING A TERMINAL MISMATCH organism=? DNA sequence DG(T1):DC(N23) DG(T2):DC(N22) DG(T3):DC(N21) DT(T5):DA(N19) DA(T6):DT(N18) DT(T7):DA(N17) DG(T8):DC(N16) DC(T9):DG(N15) DG(T10):DC(N14) DT(T11):DA(N13) DT(T12):DA(N12) DG(T13):DC(N11) chainC (162) LYS163 0 0 0 0 0 0 0 0 1 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 1 chainD (197) THR212 0 0 3 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgKthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaritgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8fiy_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF E. COLI RNA POLYMERASE ELONGATION COMPLEX IN THE TRANSCRIPTION-TRANSLATION COMPLEX (RNAP IN AN ANTI-SWIVELED CONFORMATION) organism=? DNA sequence DG(T5):DC(N22) DG(T6):DC(N21) DT(T7):DA(N20) DT(T8):DA(N19) DA(T9):DT(N18) DT(T10):DA(N17) DG(T11):DC(N16) DC(T12):DG(N15) DG(T13):DC(N14) DT(T14):DA(N13) DT(T15):DA(N12) DG(T16):DC(N11) chainC (164) HIS165 0 0 0 0 0 9 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 12 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgktHssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede >8fiy_CD: title=CRYO-EM STRUCTURE OF E. COLI RNA POLYMERASE ELONGATION COMPLEX IN THE TRANSCRIPTION-TRANSLATION COMPLEX (RNAP IN AN ANTI-SWIVELED CONFORMATION) organism=? DNA sequence DG(T5):DC(N22) DG(T6):DC(N21) DT(T7):DA(N20) DT(T8):DA(N19) DA(T9):DT(N18) DT(T10):DA(N17) DG(T11):DC(N16) DC(T12):DG(N15) DG(T13):DC(N14) DT(T14):DA(N13) DT(T15):DA(N12) DG(T16):DC(N11) chainC (164) HIS165 0 0 0 0 0 9 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 12 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 2 chainD (196) GLU211 1 2 0 0 0 0 0 0 0 0 0 0 (1133) LYS1170 7 0 0 0 0 0 0 0 0 0 0 0 (1289) GLN1326 0 0 0 0 0 0 0 0 0 1 3 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgktHssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsEtkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrtfssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaritgglprvadlfearrpkepailaeisgivsfgketKgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfQettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8flj_A: title=CAS1-CAS2/3 INTEGRASE AND IHF BOUND TO CRISPR LEADER, REPEAT AND FOREIGN DNA organism=? DNA sequence DA(I1):DT(J300) DA(I2):DT(J299) DG(I3):DC(J298) DC(I4):DG(J297) DT(I5):DA(J296) DT(I6):DA(J295) DC(I7):DG(J294) DC(I8):DG(J293) DG(I9):DC(J292) DA(I10):DT(J291) DC(I11):DG(J290) DC(I12):DG(J289) DC(I13):DG(J288) DT(I14):DA(J287) DT(I15):DA(J286) DT(I16):DA(J285) DT(I17):DA(J284) DT(I18):DA(J283) DT(I19):DA(J282) DC(I20):DG(J281) DG(I21):DC(J280) DG(I22):DC(J279) DA(I23):DT(J278) DC(I24):DG(J277) DG(I25):DC(J276) DA(I26):DT(J275) DT(I27):DA(J274) DT(I28):DA(J273) DT(I29):DA(J272) DA(I30):DT(J271) DA(I31):DT(J270) DA(I32):DT(J269) DA(I33):DT(J268) DA(I34):DT(J267) DA(I35):DT(J266) DC(I36):DG(J265) DC(I37):DG(J264) DC(I38):DG(J263) DT(I39):DA(J262) DT(I40):DA(J261) DA(I41):DT(J260) DT(I42):DA(J259) DA(I43):DT(J258) DA(I44):DT(J257) DA(I45):DT(J256) DT(I46):DA(J255) DC(I47):DG(J254) DA(I48):DT(J253) DG(I49):DC(J252) DC(I50):DG(J251) DA(I51):DT(J250) DA(I52):DT(J249) DG(I53):DC(J248) DT(I54):DA(J247) DT(I55):DA(J246) DA(I56):DT(J245) DC(I57):DG(J244) DG(I58):DC(J243) DA(I59):DT(J242) DG(I60):DC(J241) DA(I61):DT(J240) DC(I62):DG(J239) DC(I63):DG(J238) DT(I64):DA(J237) DC(I65):DG(J236) DG(I66):DC(J235) DA(I67):DT(J234) DA(I68):DT(J233) DA(I69):DT(J232) DA(I70):DT(J231) DA(I71):DT(J230) DA(I72):DT(J229) DG(I73):DC(J228) DA(I74):DT(J227) DG(I75):DC(J226) DG(I76):DC(J225) DG(I77):DC(J224) DT(I78):DA(J223) DT(I79):DA(J222) DT(I80):DA(J221) DC(I81):DG(J220) DT(I82):DA(J219) DG(I83):DC(J218) DG(I84):DC(J217) DC(I85):DG(J216) DG(I86):DC(J215) DG(I87):DC(J214) DG(I88):DC(J213) DA(I89):DT(J212) DA(I90):DT(J211) DA(I91):DT(J210) DA(I92):DT(J209) DA(I93):DT(J208) DC(I94):DG(J207) DT(I95):DA(J206) DC(I96):DG(J205) DA(I97):DT(J204) DA(I98):DT(J203) DA(I99):DT(J202) DA(I100):DT(J201) DA(I101):DT(J200) DA(I102):DT(J199) DC(I103):DG(J198) DG(I104):DC(J197) DC(I105):DG(J196) DT(I106):DA(J195) DT(I107):DA(J194) DC(I108):DG(J193) DG(I109):DC(J192) DA(I110):DT(J191) DA(I111):DT(J190) DA(I112):DT(J189) DT(I113):DA(J188) DC(I114):DG(J187) DA(I115):DT(J186) DA(I116):DT(J185) DC(I117):DG(J184) DC(I118):DG(J183) DG(I119):DC(J182) DG(I120):DC(J181) DT(I121):DA(J180) DT(I122):DA(J179) DA(I123):DT(J178) DT(I124):DA(J177) DA(I125):DT(J176) DG(I126):DC(J175) DG(I127):DC(J174) DT(I128):DA(J173) DT(I129):DA(J172) DT(I130):DA(J171) DT(I131):DA(J170) DC(I132):DG(J169) DG(I133):DC(J168) DG(I134):DC(J167) DA(I135):DT(J166) DG(I136):DC(J165) DC(I137):DG(J164) DT(I138):DA(J163) DA(I139):DT(J162) DG(K28):DC(J161) DT(K29):DA(J160) DT(K30):DA(J159) DC(K31):DG(J158) DA(K32):DT(J157) DC(K33):DG(J156) DT(K34):DA(J155) DG(K35):DC(J154) DC(K36):DG(J153) chainA (173) GLU184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 (176) LEU187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (177) THR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 (180) ALA191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 (181) ARG192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 (184) LYS195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 (246) THR257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (247) ARG258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 prot.sequence ilhskranlyylqhcrvlvnggrveyvtdegrhshywnipianttslllgtgtsitqaamrelaragvlvgfcggggtplfsanevdvevswltpqseyrpteylqrwvgfwfdeekrlvaarhfqrarlerirhswledrvlrdagfavdatalavavedsaraleqapnhEhlLTeeARlsKrlfklaaqatrygefvrakrgsggdpanrfldhgnylayglaatatwvlgiphglavlhgkTRrgglvfdvadlikdslilpqaflsamrgdeeqdfrqacldnlsraqaldfmidtlkdvaqrst >8flj_AMN: title=CAS1-CAS2/3 INTEGRASE AND IHF BOUND TO CRISPR LEADER, REPEAT AND FOREIGN DNA organism=? DNA sequence DA(I1):DT(J300) DA(I2):DT(J299) DG(I3):DC(J298) DC(I4):DG(J297) DT(I5):DA(J296) DT(I6):DA(J295) DC(I7):DG(J294) DC(I8):DG(J293) DG(I9):DC(J292) DA(I10):DT(J291) DC(I11):DG(J290) DC(I12):DG(J289) DC(I13):DG(J288) DT(I14):DA(J287) DT(I15):DA(J286) DT(I16):DA(J285) DT(I17):DA(J284) DT(I18):DA(J283) DT(I19):DA(J282) DC(I20):DG(J281) DG(I21):DC(J280) DG(I22):DC(J279) DA(I23):DT(J278) DC(I24):DG(J277) DG(I25):DC(J276) DA(I26):DT(J275) DT(I27):DA(J274) DT(I28):DA(J273) DT(I29):DA(J272) DA(I30):DT(J271) DA(I31):DT(J270) DA(I32):DT(J269) DA(I33):DT(J268) DA(I34):DT(J267) DA(I35):DT(J266) DC(I36):DG(J265) DC(I37):DG(J264) DC(I38):DG(J263) DT(I39):DA(J262) DT(I40):DA(J261) DA(I41):DT(J260) DT(I42):DA(J259) DA(I43):DT(J258) DA(I44):DT(J257) DA(I45):DT(J256) DT(I46):DA(J255) DC(I47):DG(J254) DA(I48):DT(J253) DG(I49):DC(J252) DC(I50):DG(J251) DA(I51):DT(J250) DA(I52):DT(J249) DG(I53):DC(J248) DT(I54):DA(J247) DT(I55):DA(J246) DA(I56):DT(J245) DC(I57):DG(J244) DG(I58):DC(J243) DA(I59):DT(J242) DG(I60):DC(J241) DA(I61):DT(J240) DC(I62):DG(J239) DC(I63):DG(J238) DT(I64):DA(J237) DC(I65):DG(J236) DG(I66):DC(J235) DA(I67):DT(J234) DA(I68):DT(J233) DA(I69):DT(J232) DA(I70):DT(J231) DA(I71):DT(J230) DA(I72):DT(J229) DG(I73):DC(J228) DA(I74):DT(J227) DG(I75):DC(J226) DG(I76):DC(J225) DG(I77):DC(J224) DT(I78):DA(J223) DT(I79):DA(J222) DT(I80):DA(J221) DC(I81):DG(J220) DT(I82):DA(J219) DG(I83):DC(J218) DG(I84):DC(J217) DC(I85):DG(J216) DG(I86):DC(J215) DG(I87):DC(J214) DG(I88):DC(J213) DA(I89):DT(J212) DA(I90):DT(J211) DA(I91):DT(J210) DA(I92):DT(J209) DA(I93):DT(J208) DC(I94):DG(J207) DT(I95):DA(J206) DC(I96):DG(J205) DA(I97):DT(J204) DA(I98):DT(J203) DA(I99):DT(J202) DA(I100):DT(J201) DA(I101):DT(J200) DA(I102):DT(J199) DC(I103):DG(J198) DG(I104):DC(J197) DC(I105):DG(J196) DT(I106):DA(J195) DT(I107):DA(J194) DC(I108):DG(J193) DG(I109):DC(J192) DA(I110):DT(J191) DA(I111):DT(J190) DA(I112):DT(J189) DT(I113):DA(J188) DC(I114):DG(J187) DA(I115):DT(J186) DA(I116):DT(J185) DC(I117):DG(J184) DC(I118):DG(J183) DG(I119):DC(J182) DG(I120):DC(J181) DT(I121):DA(J180) DT(I122):DA(J179) DA(I123):DT(J178) DT(I124):DA(J177) DA(I125):DT(J176) DG(I126):DC(J175) DG(I127):DC(J174) DT(I128):DA(J173) DT(I129):DA(J172) DT(I130):DA(J171) DT(I131):DA(J170) DC(I132):DG(J169) DG(I133):DC(J168) DG(I134):DC(J167) DA(I135):DT(J166) DG(I136):DC(J165) DC(I137):DG(J164) DT(I138):DA(J163) DA(I139):DT(J162) DG(K28):DC(J161) DT(K29):DA(J160) DT(K30):DA(J159) DC(K31):DG(J158) DA(K32):DT(J157) DC(K33):DG(J156) DT(K34):DA(J155) DG(K35):DC(J154) DC(K36):DG(J153) chainA (173) GLU184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 (176) LEU187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (177) THR188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 0 (180) ALA191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 (181) ARG192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 (184) LYS195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 (246) THR257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (247) ARG258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 chainM ( 55) ARG55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 55) ARG55 0 0 0 0 0 0 0 0 0 0 0 0 3 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ilhskranlyylqhcrvlvnggrveyvtdegrhshywnipianttslllgtgtsitqaamrelaragvlvgfcggggtplfsanevdvevswltpqseyrpteylqrwvgfwfdeekrlvaarhfqrarlerirhswledrvlrdagfavdatalavavedsaraleqapnhEhlLTeeARlsKrlfklaaqatrygefvrakrgsggdpanrfldhgnylayglaatatwvlgiphglavlhgkTRrgglvfdvadlikdslilpqaflsamrgdeeqdfrqacldnlsraqaldfmidtlkdvaqrst/mnillvsqcekralsetrrildqfaerrgertwqtpitqagldtlrrllkksarRntavachwirgrdhsellwivgdasrfnaqgavptnrtcrdilrkedendwhsaedirlltvmaalfhdigkasqafqaklrnrgkpmadayrhewvslrlfeafvgpgssdedwlrrladkretgdawlsqlarddrqsappgpfqksrlpplaqavgwlivshhrlpngdhrgsaslarlpapiqsqwcgardadakekaacwqfphglpfasahwrartalcaqsmlerpgllargpallhdsyvmhvsrlilmladhhysslpadsrlgdpnfplhantdrdsgklkqrldehllgvalhsrklagtlprlerqlprlarhkgftrrveqprfrwqdkaydcamacreqamehgffglnlastgcgktlangrilyaladpqrgarfsialglrsltlqtgqayrerlglgdddlailvggsaarelfekqqerlersgsesaqellaenshvhfagtledgplrewlgrnsagnrllqapilactidhlmpaseslrgghqiapllrlmtsdlvldevddfdiddlpalsrlvhwaglfgsrvllssatlppalvqglfeayrsgreifqrhrgapgrateircawfdefssqssahgavtsfseahatfvaqrlakleqlpprrqaqlctvhaagearpalcrmadlhrchhanieplielaqailaqgapeglhvhlcvyhsrhpllvrsaierqldellaalfarptlakaspvaevdydwaivepssmrsiiqlagrirrhnlyllsrnirslegqnpafqrpgfetpdfpldshdlallaridaspriveprsrlvdlehrrlralmladdppssllgvplwwqtpaslsgalqtsqpfragakercyallerlhfsrywsnqdnllrntwgtvnyreelvamagredldlrqcamrygevrlre/mnillvsqcekralsetrrildqfaerrgertwqtpitqagldtlrrllkksarRntavachwirgrdhsellwivgdasrfnaqgavptnrtcrdilrkedendwhsaedirlltvmaalfhdigkasqafqaklrnrgkpmadayrhewvslrlfeafvgpgssdedwlrrladkretgdawlsqlarddrqsappgpfqksrlpplaqavgwlivshhrlpngdhrgsaslarlpapiqsqwcgardadakekaacwqfphglpfasahwrartalcaqsmlerpgllargpallhdsyvmhvsrlilmladhhysslpadsrlgdpnfplhantdrdsgklkqrldehllgvalhsrklagtlprlerqlprlarhkgftrrveqprfrwqdkaydcamacreqamehgffglnlastgcgktlangrilyaladpqrgarfsialglrsltlqtgqayrerlglgdddlailvggsaarelfekqqerlersgsesaqellaenshvhfagtledgplrewlgrnsagnrllqapilactidhlmpaseslrgghqiapllrlmtsdlvldevddfdiddlpalsrlvhwaglfgsrvllssatlppalvqglfeayrsgreifqrhrgapgrateircawfdefssqssahgavtsfseahatfvaqrlakleqlpprrqaqlvhaagearpalcrmadlhrchhanieplielaqailaqgapeglhvhlcvyhsrhpllvrsaierqldellaalfarptlakapvaevydwaivepssmrsiiqlagrirrhnlyllsrnirslegqnpafqrpgfetpdfpldshdlallaridaspriveprsrlvdlehrrlralmladdppssllgvplwwqtpaslsgalqtsqpfragakercysnqdnllrntwgtvnyreelvamagredldlrqcamrygevrlre >8flj_CD: title=CAS1-CAS2/3 INTEGRASE AND IHF BOUND TO CRISPR LEADER, REPEAT AND FOREIGN DNA organism=? DNA sequence DG(L1):DC(K22) DC(L2):DG(K21) DT(L3):DA(K20) DC(L4):DG(K19) DT(L5):DA(K18) DA(L6):DT(K17) DG(L7):DC(K16) DC(L8):DG(K15) DA(L9):DT(K14) DA(L10):DT(K13) DA(L11):DT(K12) DA(L12):DT(K11) DC(L13):DG(K10) DG(L14):DC(K9) DA(L15):DT(K8) DC(L16):DG(K7) DT(L17):DA(K6) DT(L18):DA(K5) DG(L19):DC(K4) DC(L20):DG(K3) DA(L21):DT(K2) DC(L22):DG(K1) chainC ( 7) HIS25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 ( 22) ASP40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ( 44) THR62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainD prot.sequence nlyylqHcrvlvnggrveyvtDegrhshywnipianttslllgTgtsitqaamrelaragvlvgfcggggtplfsanevdvevswltpqseyrpteylqrwvgfwfdeekrlvaarhfqrarlerirhswledrvlrdagfavdatalavavedsaraleqapnhehllteearlskrlfklaaqatrygefvrakrgsggdpanrfldhgnylayglaatatwvlgiphglavlhgktrrgglvfdvadlikdslilpqaflsamrgdeeqdfrqacldnlsraqaldfmidtlkdvaqrst/elktilHskranlyylqhcrvLvnggrveyvtdegrhshywniPianttslllgtgtsitqaamrelaragvlvgfcggggtplfsanevdvevswltpqseyrpteylqrwvgfwfdeekrlvaarhfqrarlerirhswledrvlrdagfavdatalavavedsaraleqapnhehllteearlskrlfklaaqatrygefvrakrgsggdpanrfldhgnylayglaatatwvlgiphglavlhgktrrgglvfdvadlikdslilpqaflsamrgdeeqdfrqacldnlsraqaldfmidtlkdvaqrstv >8flj_EFGH: title=CAS1-CAS2/3 INTEGRASE AND IHF BOUND TO CRISPR LEADER, REPEAT AND FOREIGN DNA organism=? DNA sequence DA(I1):DT(J300) DA(I2):DT(J299) DG(I3):DC(J298) DC(I4):DG(J297) DT(I5):DA(J296) DT(I6):DA(J295) DC(I7):DG(J294) DC(I8):DG(J293) DG(I9):DC(J292) DA(I10):DT(J291) DC(I11):DG(J290) DC(I12):DG(J289) DC(I13):DG(J288) DT(I14):DA(J287) DT(I15):DA(J286) DT(I16):DA(J285) DT(I17):DA(J284) DT(I18):DA(J283) DT(I19):DA(J282) DC(I20):DG(J281) DG(I21):DC(J280) DG(I22):DC(J279) DA(I23):DT(J278) DC(I24):DG(J277) DG(I25):DC(J276) DA(I26):DT(J275) DT(I27):DA(J274) DT(I28):DA(J273) DT(I29):DA(J272) DA(I30):DT(J271) DA(I31):DT(J270) DA(I32):DT(J269) DA(I33):DT(J268) DA(I34):DT(J267) DA(I35):DT(J266) DC(I36):DG(J265) DC(I37):DG(J264) DC(I38):DG(J263) DT(I39):DA(J262) DT(I40):DA(J261) DA(I41):DT(J260) DT(I42):DA(J259) DA(I43):DT(J258) DA(I44):DT(J257) DA(I45):DT(J256) DT(I46):DA(J255) DC(I47):DG(J254) DA(I48):DT(J253) DG(I49):DC(J252) DC(I50):DG(J251) DA(I51):DT(J250) DA(I52):DT(J249) DG(I53):DC(J248) DT(I54):DA(J247) DT(I55):DA(J246) DA(I56):DT(J245) DC(I57):DG(J244) DG(I58):DC(J243) DA(I59):DT(J242) DG(I60):DC(J241) DA(I61):DT(J240) DC(I62):DG(J239) DC(I63):DG(J238) DT(I64):DA(J237) DC(I65):DG(J236) DG(I66):DC(J235) DA(I67):DT(J234) DA(I68):DT(J233) DA(I69):DT(J232) DA(I70):DT(J231) DA(I71):DT(J230) DA(I72):DT(J229) DG(I73):DC(J228) DA(I74):DT(J227) DG(I75):DC(J226) DG(I76):DC(J225) DG(I77):DC(J224) DT(I78):DA(J223) DT(I79):DA(J222) DT(I80):DA(J221) DC(I81):DG(J220) DT(I82):DA(J219) DG(I83):DC(J218) DG(I84):DC(J217) DC(I85):DG(J216) DG(I86):DC(J215) DG(I87):DC(J214) DG(I88):DC(J213) DA(I89):DT(J212) DA(I90):DT(J211) DA(I91):DT(J210) DA(I92):DT(J209) DA(I93):DT(J208) DC(I94):DG(J207) DT(I95):DA(J206) DC(I96):DG(J205) DA(I97):DT(J204) DA(I98):DT(J203) DA(I99):DT(J202) DA(I100):DT(J201) DA(I101):DT(J200) DA(I102):DT(J199) DC(I103):DG(J198) DG(I104):DC(J197) DC(I105):DG(J196) DT(I106):DA(J195) DT(I107):DA(J194) DC(I108):DG(J193) DG(I109):DC(J192) DA(I110):DT(J191) DA(I111):DT(J190) DA(I112):DT(J189) DT(I113):DA(J188) DC(I114):DG(J187) DA(I115):DT(J186) DA(I116):DT(J185) DC(I117):DG(J184) DC(I118):DG(J183) DG(I119):DC(J182) DG(I120):DC(J181) DT(I121):DA(J180) DT(I122):DA(J179) DA(I123):DT(J178) DT(I124):DA(J177) DA(I125):DT(J176) DG(I126):DC(J175) DG(I127):DC(J174) DT(I128):DA(J173) DT(I129):DA(J172) DT(I130):DA(J171) DT(I131):DA(J170) DC(I132):DG(J169) DG(I133):DC(J168) DG(I134):DC(J167) DA(I135):DT(J166) DG(I136):DC(J165) DC(I137):DG(J164) DT(I138):DA(J163) DA(I139):DT(J162) chainE ( 64) PRO68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 66) PRO66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 62) ARG66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) PRO68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 66) PRO66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) LYS67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence altkaeiaerlyeelglnkreakelvelffeeirqalehneqvklsgfgnfdlrdkrqrpgrnPKtgeeipitarrvvtfrpgqklkarveaya/gpmtkselierivthqgqlsakdvelaiktmleqmsqalatgdrieirgfgsfslhyraprvgrnPktgesvrldgkfvphfkpgkelrdrvne/altkaeiaerlyeelglnkreakelvelffeeirqalehneqvklsgfgnfdlrdkrqrpgRnPKtgeeipitarrvvtfrpgqklkarveayagtks/gpmtkselierivthqgqlsakdvelaiktmleqmsqalatgdrieirgfgsfslhyraprvgrnPKtgesvrldgkfvphfkpgkelrdrvne >8fn3_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INCORPORATING DITP ACROSS DC organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DT(P3):DA(T10) DG(P4):DC(T9) DT(P5):DA(T8) DG(P6):DC(T7) DA(P7):DT(T6) DG(P8):DC(T5) chainA (372) LEU378 0 0 0 0 0 1 2 0 (376) ARG382 0 4 4 0 0 0 0 0 prot.sequence atgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >8fn7_ACD:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF WT HIV-1 INTASOME BOUND TO DOLUTEGRAVIR organism=? DNA sequence DG(E18):DC(F20) DC(E19):DG(F19) DT(E20):DA(F18) DA(E21):DT(F17) DG(E22):DC(F16) DA(E23):DT(F15) DG(E24):DC(F14) DA(E25):DT(F13) DT(E26):DA(F12) DT(E27):DA(F11) DT(E28):DA(F10) DT(E29):DA(F9) DC(E30):DG(F8) DC(E31):DG(F7) DC(E32):DG(F6) DG(E33):DC(F5) chainA ( 51) HIS51 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fn7_G:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF WT HIV-1 INTASOME BOUND TO DOLUTEGRAVIR organism=? DNA sequence DC(L5):DG(K33) DG(L6):DC(K32) DG(L7):DC(K31) DG(L8):DC(K30) DA(L9):DT(K29) DA(L10):DT(K28) DA(L11):DT(K27) DA(L12):DT(K26) DT(L13):DA(K25) DC(L14):DG(K24) DT(L15):DA(K23) DC(L16):DG(K22) DT(L17):DA(K21) DA(L18):DT(K20) DG(L19):DC(K19) DC(L20):DG(K18) chainG ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 1 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 6 10 0 prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii >8fn7_GIJ:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF WT HIV-1 INTASOME BOUND TO DOLUTEGRAVIR organism=? DNA sequence DG(K18):DC(L20) DC(K19):DG(L19) DT(K20):DA(L18) DA(K21):DT(L17) DG(K22):DC(L16) DA(K23):DT(L15) DG(K24):DC(L14) DA(K25):DT(L13) DT(K26):DA(L12) DT(K27):DA(L11) DT(K28):DA(L10) DT(K29):DA(L9) DC(K30):DG(L8) DC(K31):DG(L7) DC(K32):DG(L6) DG(K33):DC(L5) chainG ( 51) HIS51 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI chainJ prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnd_ACD:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 chainC chainD prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnd_GIJ:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DG(K18):DC(L20) DC(K19):DG(L19) DT(K20):DA(L18) DA(K21):DT(L17) DG(K22):DC(L16) DA(K23):DT(L15) DG(K24):DC(L14) DA(K25):DT(L13) DT(K26):DA(L12) DT(K27):DA(L11) DT(K28):DA(L10) DT(K29):DA(L9) DC(K30):DG(L8) DC(K31):DG(L7) DC(K32):DG(L6) DG(K33):DC(L5) chainG ( 51) HIS51 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI chainJ prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfgipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fng_ACD:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DG(E18):DC(F20) DC(E19):DG(F19) DT(E20):DA(F18) DA(E21):DT(F17) DG(E22):DC(F16) DA(E23):DT(F15) DG(E24):DC(F14) DA(E25):DT(F13) DT(E26):DA(F12) DT(E27):DA(F11) DT(E28):DA(F10) DT(E29):DA(F9) DC(E30):DG(F8) DC(E31):DG(F7) DC(E32):DG(F6) DG(E33):DC(F5) chainA ( 51) HIS51 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 2 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefaipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fng_GJ:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DG(K18):DC(L20) DC(K19):DG(L19) DT(K20):DA(L18) DA(K21):DT(L17) DG(K22):DC(L16) DA(K23):DT(L15) DG(K24):DC(L14) DA(K25):DT(L13) DT(K26):DA(L12) DT(K27):DA(L11) DT(K28):DA(L10) DT(K29):DA(L9) DC(K30):DG(L8) DC(K31):DG(L7) DC(K32):DG(L6) DG(K33):DC(L5) chainG ( 51) HIS51 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 2 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefaipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnh_ACD:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF Q148K HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DG(E18):DC(F20) DC(E19):DG(F19) DT(E20):DA(F18) DA(E21):DT(F17) DG(E22):DC(F16) DA(E23):DT(F15) DG(E24):DC(F14) DA(E25):DT(F13) DT(E26):DA(F12) DT(E27):DA(F11) DT(E28):DA(F10) DT(E29):DA(F9) DC(E30):DG(F8) DC(E31):DG(F7) DC(E32):DG(F6) DG(E33):DC(F5) chainA ( 51) HIS51 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQskgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnh_GHIJ:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF Q148K HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DG(K18):DC(L20) DC(K19):DG(L19) DT(K20):DA(L18) DA(K21):DT(L17) DG(K22):DC(L16) DA(K23):DT(L15) DG(K24):DC(L14) DA(K25):DT(L13) DT(K26):DA(L12) DT(K27):DA(L11) DT(K28):DA(L10) DT(K29):DA(L9) DC(K30):DG(L8) DC(K31):DG(L7) DC(K32):DG(L6) DG(K33):DC(L5) chainG ( 51) HIS51 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH chainI chainJ prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgipynpQskgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/ldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqspgiwqlDcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefgviesmnkelkkiigqvrdQaehlkTAvqMavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrwkgpakllwkgegavviqdnsdikvvprrkakiird/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnj_A:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/G140A HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 1 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 5 15 0 prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfaipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii >8fnj_ACD:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/G140A HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 1 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 5 15 0 chainC chainD prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfaipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnj_GIJ:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/G140A HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DG(K18):DC(L20) DC(K19):DG(L19) DT(K20):DA(L18) DA(K21):DT(L17) DG(K22):DC(L16) DA(K23):DT(L15) DG(K24):DC(L14) DA(K25):DT(L13) DT(K26):DA(L12) DT(K27):DA(L11) DT(K28):DA(L10) DT(K29):DA(L9) DC(K30):DG(L8) DC(K31):DG(L7) DC(K32):DG(L6) DG(K33):DC(L5) chainG ( 51) HIS51 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 15 5 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI chainJ prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfaipynpQsqgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnl_A:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/Q148K HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DG(E18):DC(F20) DC(E19):DG(F19) DT(E20):DA(F18) DA(E21):DT(F17) DG(E22):DC(F16) DA(E23):DT(F15) DG(E24):DC(F14) DA(E25):DT(F13) DT(E26):DA(F12) DT(E27):DA(F11) DT(E28):DA(F10) DT(E29):DA(F9) DC(E30):DG(F8) DC(E31):DG(F7) DC(E32):DG(F6) DG(E33):DC(F5) chainA ( 51) HIS51 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfgipynpQskgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii >8fnl_ACD:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/Q148K HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 1 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 chainC chainD prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfgipynpQskgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnl_GIJ:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/Q148K HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DG(K18):DC(L20) DC(K19):DG(L19) DT(K20):DA(L18) DA(K21):DT(L17) DG(K22):DC(L16) DA(K23):DT(L15) DG(K24):DC(L14) DA(K25):DT(L13) DT(K26):DA(L12) DT(K27):DA(L11) DT(K28):DA(L10) DT(K29):DA(L9) DC(K30):DG(L8) DC(K31):DG(L7) DC(K32):DG(L6) DG(K33):DC(L5) chainG ( 51) HIS51 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI chainJ prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfgipynpQskgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnm_ACD:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF G140A/Q148K HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 chainC chainD prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefaipynpQskgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnm_GIJ:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF G140A/Q148K HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DC(L5):DG(K33) DG(L6):DC(K32) DG(L7):DC(K31) DG(L8):DC(K30) DA(L9):DT(K29) DA(L10):DT(K28) DA(L11):DT(K27) DA(L12):DT(K26) DT(L13):DA(K25) DC(L14):DG(K24) DT(L15):DA(K23) DC(L16):DG(K22) DT(L17):DA(K21) DA(L18):DT(K20) DG(L19):DC(K19) DC(L20):DG(K18) chainG ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 chainI chainJ prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqefaipynpQskgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnn_ACD:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/G140A/Q148K HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DG(E18):DC(F20) DC(E19):DG(F19) DT(E20):DA(F18) DA(E21):DT(F17) DG(E22):DC(F16) DA(E23):DT(F15) DG(E24):DC(F14) DA(E25):DT(F13) DT(E26):DA(F12) DT(E27):DA(F11) DT(E28):DA(F10) DT(E29):DA(F9) DC(E30):DG(F8) DC(E31):DG(F7) DC(E32):DG(F6) DG(E33):DC(F5) chainA ( 51) HIS51 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 2 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 13 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) GLU157 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfaipynpQskgviESmnKElkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnn_GIJ:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/G140A/Q148K HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DC(L5):DG(K33) DG(L6):DC(K32) DG(L7):DC(K31) DG(L8):DC(K30) DA(L9):DT(K29) DA(L10):DT(K28) DA(L11):DT(K27) DA(L12):DT(K26) DT(L13):DA(K25) DC(L14):DG(K24) DT(L15):DA(K23) DC(L16):DG(K22) DT(L17):DA(K21) DA(L18):DT(K20) DG(L19):DC(K19) DC(L20):DG(K18) chainG ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 2 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 6 13 0 (157) GLU157 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 chainI chainJ prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfaipynpQskgviESmnKElkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fno_ACD:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/G140A/Q148R HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DG(E18):DC(F20) DC(E19):DG(F19) DT(E20):DA(F18) DA(E21):DT(F17) DG(E22):DC(F16) DA(E23):DT(F15) DG(E24):DC(F14) DA(E25):DT(F13) DT(E26):DA(F12) DT(E27):DA(F11) DT(E28):DA(F10) DT(E29):DA(F9) DC(E30):DG(F8) DC(E31):DG(F7) DC(E32):DG(F6) DG(E33):DC(F5) chainA ( 51) HIS51 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfaipynpQsrgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fno_GJ:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/G140A/Q148R HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DG(K18):DC(L20) DC(K19):DG(L19) DT(K20):DA(L18) DA(K21):DT(L17) DG(K22):DC(L16) DA(K23):DT(L15) DG(K24):DC(L14) DA(K25):DT(L13) DT(K26):DA(L12) DT(K27):DA(L11) DT(K28):DA(L10) DT(K29):DA(L9) DC(K30):DG(L8) DC(K31):DG(L7) DC(K32):DG(L6) DG(K33):DC(L5) chainG ( 51) HIS51 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 1 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfaipynpQsrgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnp_A:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/G140S/Q148H HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DG(E18):DC(F20) DC(E19):DG(F19) DT(E20):DA(F18) DA(E21):DT(F17) DG(E22):DC(F16) DA(E23):DT(F15) DG(E24):DC(F14) DA(E25):DT(F13) DT(E26):DA(F12) DT(E27):DA(F11) DT(E28):DA(F10) DT(E29):DA(F9) DC(E30):DG(F8) DC(E31):DG(F7) DC(E32):DG(F6) DG(E33):DC(F5) chainA ( 51) HIS51 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 2 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfsipynpQshgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii >8fnp_AD:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/G140S/Q148H HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 2 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 chainD prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfsipynpQshgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnp_GIJ:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/G140S/Q148H HIV-1 INTASOME WITH DOLUTEGRAVIR BOUND organism=? DNA sequence DG(K18):DC(L20) DC(K19):DG(L19) DT(K20):DA(L18) DA(K21):DT(L17) DG(K22):DC(L16) DA(K23):DT(L15) DG(K24):DC(L14) DA(K25):DT(L13) DT(K26):DA(L12) DT(K27):DA(L11) DT(K28):DA(L10) DT(K29):DA(L9) DC(K30):DG(L8) DC(K31):DG(L7) DC(K32):DG(L6) DG(K33):DC(L5) chainG ( 51) HIS51 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 2 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI chainJ prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfsipynpQshgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnq_A:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/G140A/Q148K HIV-1 INTASOME WITH 4D BOUND organism=? DNA sequence DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 1 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfaipynpQskgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii >8fnq_ACD:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/G140A/Q148K HIV-1 INTASOME WITH 4D BOUND organism=? DNA sequence DC(F5):DG(E33) DG(F6):DC(E32) DG(F7):DC(E31) DG(F8):DC(E30) DA(F9):DT(E29) DA(F10):DT(E28) DA(F11):DT(E27) DA(F12):DT(E26) DT(F13):DA(E25) DC(F14):DG(E24) DT(F15):DA(E23) DC(F16):DG(E22) DT(F17):DA(E21) DA(F18):DT(E20) DG(F19):DC(E19) DC(F20):DG(E18) chainA ( 51) HIS51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (146) GLN146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (152) GLU152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (153) SER153 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 1 (156) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 chainC chainD prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfaipynpQskgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fnq_GIJ:Ribonuclease_H-like;N-terminal_Zn_binding_domain_of_HIV_integrase;DNA-binding_domain_of_retroviral_integrase; title=STRUCTURE OF E138K/G140A/Q148K HIV-1 INTASOME WITH 4D BOUND organism=? DNA sequence DG(K18):DC(L20) DC(K19):DG(L19) DT(K20):DA(L18) DA(K21):DT(L17) DG(K22):DC(L16) DA(K23):DT(L15) DG(K24):DC(L14) DA(K25):DT(L13) DT(K26):DA(L12) DT(K27):DA(L11) DT(K28):DA(L10) DT(K29):DA(L9) DC(K30):DG(L8) DC(K31):DG(L7) DC(K32):DG(L6) DG(K33):DC(L5) chainG ( 51) HIS51 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) GLN146 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) GLU152 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER153 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LYS156 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI chainJ prot.sequence fldgidkaqeehekyhsnwramasdfnlppvvakeivascdkcqlkgeamHgqvdcspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtdngsnftsttvkaacwwagikqkfaipynpQskgviESmnKelkkiigqvrdqaehlktavqmavfihnfkrkggiggysagerivdiiatdiqtkelqkqitkiqnfrvyyrkgpakllwkgegavviqdnsdikvvprrkakii/elqkqitkiqnfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvpRrkakiirdygkqmag/nfrvyyrdsrdpvwkgpakllwkgegavviqdnsdikvvprrkakii >8fog_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INCORPORATING DITP ACROSS DT organism=Homo sapiens DNA sequence DC(T5):DG(P8) DT(T6):DA(P7) DC(T7):DG(P6) DA(T8):DT(P5) DC(T9):DG(P4) DA(T10):DT(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (372) LEU378 0 1 1 0 0 0 0 0 (376) ARG382 0 0 0 0 0 2 6 0 prot.sequence atgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcsknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >8foh_1AB:Prim-pol_domain;DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF S. CEREVISIAE DNA POLYMERASE ALPHA-PRIMASE COMPLEX IN THE RNA SYNTHESIS STATE organism=? DNA sequence DG(T10) DC(T11) DT(T12) DG(T13) DC(T14) DC(T15) DG(T16) DC(T17) DC(T18) DG(T19) DC(T20) DC(T21) chain1 chainA chainB (314) HIS401 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence tfqmfwldycevnntlilfgkvcvsamvqinglcrelfflpregktptdiheeiipllmdkygldnirakpqkmkysfelpdipsesdylkvllpyrdtipsdlssdtfyhvfggnsnifesfviqnrimgpcwldirnashcavevsvdkpqnitptttktmpnlrclslsiqtlmnpkenkqeivsitlsayrnisldspipenikpddlctlvrppqpgrvrlfnnekamlscfcamlkvedpdviighrlqnvyldvlahrmhdlniptfssigrrlrrtwpekfgrgnsnmnhffisdicsgrlicdianemgqsltpkcqswdlsemyqvtcekehkpldidyqnpqyqndvnsmtmalqenitncmisaevsyriqlltltkqltnlagnawaqtlggtragrneyillhefsrngfivpdkvfepekglhknyvlvmdfnslypsiiqefnicfttvdrnkedidelpsvvlprllanlvdrrrevkkvmktetdphkrvqcdirqqalkltansmygclgyvsrfyakplamlvtnkgreilmntrqlaesmnllvvygdtdsvmidtgcdnyadaikiglgfkrlvneryrlleididnvfkklllhakkkyaaltvnldkngngttvlevkgldmkrrecplsrdvsihvlntilealqevydyledirikvetnnpqyylekqifapverllfnvvrlsealgerfkdtvtlelscpscdkrfpfggivssnyyrvsynglqckhceqlftplqltsqiehsirahislyyagwlqcddstcgivtrqvsvfgkrclndgctgvmrykysdkqlynqllyfdslfdceknkkqelkpiylpddldypkeqltessikalteqnrelmetgrsvvqkylndc/psssdmeyyykslypfkhifnwlnhspkpsrdminrefamafrsgaykrynsfnsvqdfkaqiekanpdrfeigaiynkpprerdtkelvfdidmddydafrtccsgaqvcskcwkfislamkitntalredfgykdfiwvfsgrrgahcwvsdkraraltdvqrrnvldyvnvirdrntdkrlalkrpyhphlarsleqlkpffvsimleeqnpweddqhaiqtllpalydkqlidslkkywldnprrsskekwndidqiatslfkgpkqdshiiklreckedlvlmtlypkldvevtkqtihllkapfcihpatgnvcvpidesfapekapklidlq/eekklyarlyesklsfydlppqeqfeiwaidrlkilleiesclsrnksikeietiikpqfqkllpfntesledrkkdyyshfilrlcfcrskelrekfvraetflfkirfnmltstdqtkfvqslqfisneekaelshqlyqtvsaslqfqlnlneehqrkqyfqqekfiklpfenvielvgnrlvflkdgyaylqqlnllsnefasklnqeliktyqylprlnedrllpilnhlssgytdeinaqsvwseeissnyplciknlmeglkknhhlryygrqqlslflkgiglsadealkfwseaftkeyrysfrHnyglegnrinykpwdchtilskprpgrgdyhgcpfrdwsherlsaelraqiisvldscqkgeytiactkvfemthhiahpnlyfersrqlqk >8foj_1:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF S. CEREVISIAE DNA POLYMERASE ALPHA-PRIMASE COMPLEX IN THE POST RNA HANDOFF STATE organism=? DNA sequence DG(T5) DC(T6) DT(T7) DG(T8) DC(T9) DC(T10) DC(T11) DG(T12) DC(T13) DC(T14) DT(T15) chain1 (286) ASN681 2 0 0 0 0 0 0 0 0 0 0 prot.sequence tfqmfwldycevnntlilfgkvcvsamvqinglcrelfflpregktptdiheeiipllmdkygldnirakpqkmkysfelpdipsesdylkvllpyqtpkssrdtipsdlssdtfyhvfggnsnifesfviqnrimgpcwldikgashcavevsvdkpqnitptttktmpnlrclslsiqtlmnpkenkqeivsitlsayrnnikpddlctlvrppqsrvrlfnnekamlscfcamlkvedpdviighrlqnvyldvlahrmhdlniptfssigrrlrrtwpekfNmnhffisdicsgrlicdianemgqsltpkcqswdlsemyqvtcekehkpldidyqnpqyqndvnsmtmalqenitncmisaevsyriqlltltkqltnlagnawaqtlggtragrneyillhefsrngfivpdkvfepekglhknyvlvmdfnslypsiiqefnicfttvdrnkedidelpsvpqgvlprllanlvdrrrevkkvmktetdphkrvqcdirqqalkltansmygclgysrfyakplamlvtnkgreilmntrqlaesmnllvvygdtdsvmidtgcdnyadaikiglgfkrlvneryrlleididnvfkklllhakkkyaaltvnttvlevkgldmkrrefcplsrdvsihvlntieealqevydyledirikvetnniridkykinmklskdpkaypggknmpavqvalrmrkagrvvkagsvitfvitklsvaerahalnevmiksnnlipdpqyylekqifapverlleridsfnvvrlsealgdverfkdtvtlelscpscdkrfpfggivssnyyrvsynglqckhceqlftplqltsqiehsirahislyyagwlqcddstcgivtrqvsvfgkrclndgctgvmrykysdkqlynqllyfdslfdceknkkqelkpiylpddldypqltessikalteqnrelmetgrsvvqkylndc >8foj_1B:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF S. CEREVISIAE DNA POLYMERASE ALPHA-PRIMASE COMPLEX IN THE POST RNA HANDOFF STATE organism=? DNA sequence DG(T5) DC(T6) DT(T7) DG(T8) DC(T9) DC(T10) DC(T11) DG(T12) DC(T13) DC(T14) DT(T15) chain1 (286) ASN681 2 0 0 0 0 0 0 0 0 0 0 chainB prot.sequence tfqmfwldycevnntlilfgkvcvsamvqinglcrelfflpregktptdiheeiipllmdkygldnirakpqkmkysfelpdipsesdylkvllpyqtpkssrdtipsdlssdtfyhvfggnsnifesfviqnrimgpcwldikgashcavevsvdkpqnitptttktmpnlrclslsiqtlmnpkenkqeivsitlsayrnnikpddlctlvrppqsrvrlfnnekamlscfcamlkvedpdviighrlqnvyldvlahrmhdlniptfssigrrlrrtwpekfNmnhffisdicsgrlicdianemgqsltpkcqswdlsemyqvtcekehkpldidyqnpqyqndvnsmtmalqenitncmisaevsyriqlltltkqltnlagnawaqtlggtragrneyillhefsrngfivpdkvfepekglhknyvlvmdfnslypsiiqefnicfttvdrnkedidelpsvpqgvlprllanlvdrrrevkkvmktetdphkrvqcdirqqalkltansmygclgysrfyakplamlvtnkgreilmntrqlaesmnllvvygdtdsvmidtgcdnyadaikiglgfkrlvneryrlleididnvfkklllhakkkyaaltvnttvlevkgldmkrrefcplsrdvsihvlntieealqevydyledirikvetnniridkykinmklskdpkaypggknmpavqvalrmrkagrvvkagsvitfvitklsvaerahalnevmiksnnlipdpqyylekqifapverlleridsfnvvrlsealgdverfkdtvtlelscpscdkrfpfggivssnyyrvsynglqckhceqlftplqltsqiehsirahislyyagwlqcddstcgivtrqvsvfgkrclndgctgvmrykysdkqlynqllyfdslfdceknkkqelkpiylpddldypqltessikalteqnrelmetgrsvvqkylndc/ssseeekklyarlyesklsfydlppqgeitleqfeiwaidrlkilleiesclsrnksikeietiikpqfqkllpfntesledrkkdyyshfilrlcfcrskelrekfvraetflfkirfnmltstdqtkfvqslqfisneekaelshqlyqtvsaslqfqlnlneehqrkqyfqqekfiklpfenvielvgnrlvflkdgyaylqqlnllsnefasklnqeliktyqylprlneddrllpilnhlssgytdeinaqsvwseeissnyplciknlmeglkknhhlrYygrqqlslflkgiglsadealkfwseafttmekfnkeyrysfrhnyglegnrinykpwdchtilskprpgrgdyhgcpfrdwsherlsaelrsmkltqaqiisvldscqkgeytiactkvfemthhiahpnlyfersrqlqk >8fok_1B:DNA/RNA_polymerases;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF S. CEREVISIAE DNA POLYMERASE ALPHA-PRIMASE COMPLEX IN THE DNA ELONGATION STATE organism=? DNA sequence DT(T1) DG(T2) DT(T3) DC(T4) DC(T5) DC(T6) DC(T7) DT(T8) DC(T9) DG(T10) DC(T11) DT(T12) DG(T13) DC(T14) DC(T15) DG(T16) DC(T17) DC(T18) DG(T19) DC(T20) DC(T21) chain1 ( 10) GLU361 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) MET682 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) HIS684 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) PHE685 0 45 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (325) PHE686 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (328) ASP689 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) GLU702 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (432) ARG793 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (456) TYR843 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (461) VAL848 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (558) TYR951 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (563) TYR956 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (654) LYS1047 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (655) LYS1048 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainB (326) TYR397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (330) HIS401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (341) TYR412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence fqmfwldycEvnntlilfgkvklkddncvsamvqinglcrelfflpregktptdiheeiipllmdkygldnirakpqkmkysfelpdipsesdylkvllpyqtpkssrdtipsdlssdtfyhvfggnsnifesfviqnrimgpcwldikgadfshcavevsvdkpqnitptttktmpnlrclslsiqtlmnpkenkqeivsitlsayrnisldspipenikpddlctlvrppqstsfplglaalakqklpgrvrlfnnekamlscfcamlkvedpdviighrlqnvyldvlahrmhdlniptfssigrrlrrtwpekfgnMnHFFisDicsgrlicdianEmgqsltpkcqswdlsemyqvtcekehkpldidyqnpqyqndvnsmtmalqenitncmisaevsyriqlltltkqltnlagnawaqtlggtRagrneyillhefsrngfivpdkkYqgglVfepekglhknyvlvmdfnslypsiiqefnicfttvdrnkedidelpsvppsevdqgvlprllanlvdrrrevkkvmkkrvqcdirqqalkltansmYgclgYvnsrfyakplamlvtnkgreilmntrqlaesmnllvvygdtdsvmidtgcdnyadaikiglgfkrlvneryrlleididnvfkklllhakKKyaaltvnldkngngttvlevkgldmkrrefcplsrdvsihvlntilsdkdpeealqevydyledirikvetnniridkykinmklskdpkaypggknmpavqvalrmrkagrvvkagsvitfvitksvaerahalnevmiksnnlipdpqyylekqifapverlleridsfnvvrlsealgldskkyfrreggnnngedinnlqplettitdverfkdtvtlelscpscdkrfpfggivssnyyrvsynglqckhceqlftplqltsqiehsirahislyyagwlqcddstcgivtrqvsvfgkrclndgctgvmrykysdkqlynqllyfdslfdceknkkqelkpiylpddldypkeqltessikalteqnrelmetgrsvvqkylndc/ssseeekklyarlyesklsfydlppqgeitleqfeiwaidrlkilleiesclsrnksikeietiikpqfqkllpfntesledrkkdyyshfilrlcfcrskelrekfvraetflfkirfnmltstdqtkfvqslqfisneekaelshqlyqtvsaslqfqlnlneehqrkqyfqqekfiklpfenvielvgnrlvflkdgyaylqqlnllsnefasklnqeliktyqylprlneddrllpilnhlssgytdeinaqsvwseeissnyplciknlmeglkknhhlryygrqqlslflkgiglsadealkfwseafttmekfnkeyrYsfrHnyglegnrinYkpwdchtilskprpgrgdyhgcpfrdwsherlsaelrsmkltqaqiisvldscqkgeytiactkvfemthqthiahpnlyfersrqlqk >8fok_B: title=CRYO-EM STRUCTURE OF S. CEREVISIAE DNA POLYMERASE ALPHA-PRIMASE COMPLEX IN THE DNA ELONGATION STATE organism=? DNA sequence DT(T1) DG(T2) DT(T3) DC(T4) DC(T5) DC(T6) DC(T7) DT(T8) DC(T9) DG(T10) DC(T11) DT(T12) DG(T13) DC(T14) DC(T15) DG(T16) DC(T17) DC(T18) DG(T19) DC(T20) DC(T21) chainB (326) TYR397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 (330) HIS401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (341) TYR412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence ssseeekklyarlyesklsfydlppqgeitleqfeiwaidrlkilleiesclsrnksikeietiikpqfqkllpfntesledrkkdyyshfilrlcfcrskelrekfvraetflfkirfnmltstdqtkfvqslqfisneekaelshqlyqtvsaslqfqlnlneehqrkqyfqqekfiklpfenvielvgnrlvflkdgyaylqqlnllsnefasklnqeliktyqylprlneddrllpilnhlssgytdeinaqsvwseeissnyplciknlmeglkknhhlryygrqqlslflkgiglsadealkfwseafttmekfnkeyrYsfrHnyglegnrinYkpwdchtilskprpgrgdyhgcpfrdwsherlsaelrsmkltqaqiisvldscqkgeytiactkvfemthqthiahpnlyfersrqlqk >8fs1_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR 11A (YD905) organism=Clostridioides difficile DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainA ( 1) TYR30 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 (132) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (135) TYR168 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 (138) HIS171 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 (139) LYS172 0 0 0 0 0 0 0 0 4 9 8 0 0 0 0 (159) ASP192 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (160) LYS193 0 0 0 0 0 0 0 0 0 0 7 4 6 0 0 (188) TYR221 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (220) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (222) ASN255 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (223) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (225) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (313) GLN346 0 0 0 0 0 0 0 0 0 1 9 10 0 0 0 (316) ILE349 0 0 0 0 0 0 0 0 0 10 5 1 0 0 0 (346) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (392) ARG425 0 0 0 0 0 0 0 0 0 0 0 18 12 2 0 (393) GLU426 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (398) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 (405) GLN438 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (406) TRP439 0 0 0 0 0 0 0 0 0 0 4 14 15 15 0 (408) ARG441 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 (422) TYR455 0 0 0 0 0 0 0 16 5 0 0 0 0 0 0 (423) LYS456 0 0 0 0 0 0 0 8 10 0 0 0 0 0 0 (439) SER472 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (440) ALA473 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (441) ASP474 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (443) TYR476 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (480) MET513 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (481) SER514 0 0 0 0 0 0 5 0 6 0 0 0 0 0 0 (484) ILE517 0 0 0 0 0 0 4 3 3 0 0 0 0 0 0 (488) TYR521 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 chainB (405) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence YytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvdesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/sgiyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8fs2_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR 11B (YD907) organism=Clostridioides difficile DNA sequence DT(d1):DT(e15) DT(d2):DA(e14) DC(d3):DG(e13) DA(d4):DT(e12) DA(d5):DT(e11) DA(d6):DT(e10) DA(d7):DT(e9) DA(d8):DT(e8) DG(d9):DC(e7) DT(d10):DA(e6) DC(d11):DG(e5) DC(d12):DG(e4) DC(d13):DG(e3) DA(d14):DT(e2) DA(d15):DA(e1) chainA ( 1) TYR30 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 (131) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (134) TYR168 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 8 7 0 0 0 0 0 0 0 0 0 (138) LYS172 0 0 0 0 6 10 4 0 0 0 0 0 0 0 0 (158) ASP192 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (159) LYS193 0 0 6 4 6 0 0 0 0 0 0 0 0 0 0 (187) TYR221 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (219) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (221) ASN255 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (222) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (224) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (312) GLN346 0 0 0 11 10 1 0 0 0 0 0 0 0 0 0 (315) ILE349 0 0 0 1 5 11 0 0 0 0 0 0 0 0 0 (345) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (391) ARG425 0 2 12 18 0 0 0 0 0 0 0 0 0 0 0 (392) GLU426 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (397) ILE431 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) GLN438 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 (405) TRP439 0 14 15 12 4 0 0 0 0 0 0 0 0 0 0 (407) ARG441 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 (421) TYR455 0 0 0 0 0 0 6 14 0 0 0 0 0 0 0 (422) LYS456 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 (438) SER472 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (439) ALA473 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (440) ASP474 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (442) TYR476 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (479) MET513 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 (480) SER514 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 (483) ILE517 0 0 0 0 0 0 3 3 3 0 0 0 0 0 0 (487) TYR521 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 prot.sequence YytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8fs2_AB:S-adenosyl-L-methionine-dependent_methyltransferases; title=CAMA ADENINE METHYLTRANSFERASE COMPLEXED TO COGNATE SUBSTRATE DNA AND INHIBITOR 11B (YD907) organism=Clostridioides difficile DNA sequence DA(e1):DA(d15) DT(e2):DA(d14) DG(e3):DC(d13) DG(e4):DC(d12) DG(e5):DC(d11) DA(e6):DT(d10) DC(e7):DG(d9) DT(e8):DA(d8) DT(e9):DA(d7) DT(e10):DA(d6) DT(e11):DA(d5) DT(e12):DA(d4) DG(e13):DC(d3) DA(e14):DT(d2) DT(e15):DT(d1) chainA ( 1) TYR30 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 (131) ASN165 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (134) TYR168 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 (137) HIS171 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 (138) LYS172 0 0 0 0 0 0 0 0 4 10 6 0 0 0 0 (158) ASP192 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (159) LYS193 0 0 0 0 0 0 0 0 0 0 6 4 6 0 0 (187) TYR221 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (219) PHE253 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 (221) ASN255 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (222) ILE256 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (224) VAL258 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (312) GLN346 0 0 0 0 0 0 0 0 0 1 10 11 0 0 0 (315) ILE349 0 0 0 0 0 0 0 0 0 11 5 1 0 0 0 (345) SER379 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (391) ARG425 0 0 0 0 0 0 0 0 0 0 0 18 12 2 0 (392) GLU426 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (397) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 (404) GLN438 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 (405) TRP439 0 0 0 0 0 0 0 0 0 0 4 12 15 14 0 (407) ARG441 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 (421) TYR455 0 0 0 0 0 0 0 14 6 0 0 0 0 0 0 (422) LYS456 0 0 0 0 0 0 0 8 11 0 0 0 0 0 0 (438) SER472 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (439) ALA473 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (440) ASP474 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (442) TYR476 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (479) MET513 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (480) SER514 0 0 0 0 0 0 5 0 6 0 0 0 0 0 0 (483) ILE517 0 0 0 0 0 0 3 3 3 0 0 0 0 0 0 (487) TYR521 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 chainB (405) ILE431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 prot.sequence YytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvesdikinlfccdslkkkwrykfdyivgNppYigHKklekkykkfllekysevykDKadlyfcfykkiidilkqggigsvitprYfleslsgkdlreyiksnvnvqeivdflganiFkNIgVssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfQgiItgcdkafilskddvklnlvddkflkcwikSkninkyivdkseyrliysndidnentnkrildeiiglyktklenrREcksgIrkwyelQWgReklfferkkimypYKsnenrfaidydnnfsSADvYsffikeeyldkfsyeylvgilnssvydkyfkitakkMSknIydyYpnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi/sgiyytpkiivdyivkktlknhdiiknpyprildiscgcgnfllevydilydlfeeniyelkkkydenywtvdnihrhilnyciygadidekaisilkdsltnkkvvndldesdikinlfccdslkkkwrykfdyivgnppyighkklekkykkfllekysevykdkadlyfcfykkiidilkqggigsvitpryfleslsgkdlreyiksnvnvqeivdflganifknigvssciltfdkkktketyidvfkiknedicinkfetleellksskfehfninqrllsdewilvnkddetfynkiqekckyslediaisfqgiitgcdkafilskddvklnlvddkflkcwikskninkyivdkseyrliysndidnentnkrildeiiglyktklenrrecksgIrkwyelqwgreklfferkkimypyksnenrfaidydnnfssadvysffikeeyldkfsyeylvgilnssvydkyfkitakkmskniydyypnkvmkirifrdnnyeeienlskqiisillnksidkgkveklqikmdnlimdslgi >8fs5_A:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF S. CEREVISIAE RAD24-RFC LOADING THE 9-1-1 CLAMP ONTO A 10-NT GAPPED DNA IN STEP 3 (OPEN 9-1-1 AND STABLY BOUND CHAMBER DNA) organism=? DNA sequence DG(I11):DC(K10) DA(I12):DT(K9) DT(I13):DA(K8) DA(I14):DT(K7) DC(I15):DG(K6) DG(I16):DC(K5) DA(I17):DT(K4) DA(I18):DT(K3) DT(I19):DA(K2) DC(I20):DG(K1) chainA (265) PHE340 0 0 0 0 0 0 0 0 0 22 (266) HIS341 0 0 0 0 0 0 0 0 0 21 (366) VAL441 0 0 0 0 0 0 0 0 0 3 prot.sequence eqwyekfkpncleqvaihkrklkdvqealdamflpnakhrilllsgpsgcskstvikelskilvpkyrqnhkvtefrgdcivndlpqmesfseflkgarylvmsnlsliliedlpnvfhidtrrrfqqlilqwlyssepllpplviciteceipendnnyrkfgidytfsaetimnkeilmhprlkrikfnpinstllkkhlkficvqnmkmlkeknkwnkrqevidyiaqetgdirsaittlqfwatssgslpistrestisyFHaigkvihgshstnndneminnlfensnnllskedfklgilenyntfnkgefsisdassivdclsecdnmnglpesneyglrevrktfrniskqghnhgtVyfprewkvrklqnsfkvqaedwlnvslykynavhsfrnitlefgyyaplirkcqsykdvvdriggpiea >8ftj_A:N-terminal_domain_of_MutM-like_DNA_repair_proteins;S13-like_H2TH_domain;Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF HUMAN NEIL1 (P2G (242K) C(DELTA)100) GLYCOSYLASE BOUND TO DNA DUPLEX CONTAINING UREA organism=Homo sapiens DNA sequence DT(F306):DA(D302) DA(F307):DT(D301) DG(F308):DC(D300) DA(F309):DT(D299) DC(F310):DG(D298) DA(F311):YB9(D297) DT(F312):DA(D296) DG(F313):DC(D295) DG(F314):DC(D294) DA(F315):DT(D293) DC(F316):DG(D292) DG(F317):DC(D291) chainA ( 5) GLU6 0 0 0 0 0 15 0 0 0 0 0 0 ( 80) MET81 0 0 0 0 6 0 0 0 0 0 0 0 (117) ARG118 0 0 0 0 0 2 36 0 0 0 0 0 (119) PHE120 0 0 0 0 88 6 0 0 0 0 0 0 (222) LYS242 0 0 0 0 0 9 0 0 0 0 0 0 (224) TYR244 0 0 0 0 0 1 0 0 0 0 0 0 (250) ARG277 0 0 0 0 14 0 0 0 0 0 0 0 prot.sequence gegpelhlasqfvneacralvfggcvekssvsrnpevpfessayrisasargkelrlilsplpgaqpqqeplalvfrfgMsgsfqlvpreelprhahlrfytappgprlalcfvdiRrFgrwdlggkwqpgrgpcvlqeyqqfrenvlrnladkafdrpicealldqrffngignylraeilyrlkippfekarsvlealqnpdllelchsvpkevvqlggkgydfaafrawlrcygmpgmsslqdrhgRtiwfqgdpgplap >8fvr_FG: title=CRYOEM STRUCTURE OF E.COLI TRANSCRIPTION ELONGATION COMPLEX organism=? DNA sequence DA(A41):DT(B13) DC(A42):DG(B12) DG(A43):DC(B11) DG(A44):DC(B10) DC(A45):DG(B9) DG(A46):DC(B8) DA(A47):DT(B7) DA(A48):DT(B6) DT(A49):DA(B5) DA(A50):DT(B4) DC(A51):DG(B3) DC(A52):DG(B2) DC(A53):DG(B1) chainF (541) ARG542 36 0 0 0 0 0 0 0 0 0 0 0 0 chainG (197) THR212 0 0 0 0 0 0 0 0 0 1 0 0 0 (198) LYS213 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTKrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8fvr_G:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI TRANSCRIPTION ELONGATION COMPLEX organism=? DNA sequence DG(B1):DC(A53) DG(B2):DC(A52) DG(B3):DC(A51) DT(B4):DA(A50) DA(B5):DT(A49) DT(B6):DA(A48) DT(B7):DA(A47) DC(B8):DG(A46) DG(B9):DC(A45) DC(B10):DG(A44) DC(B11):DG(A43) DG(B12):DC(A42) DT(B13):DA(A41) chainG (197) THR212 0 0 0 1 0 0 0 0 0 0 0 0 0 (198) LYS213 0 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTKrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8fvw_FG: title=CRYOEM STRUCTURE OF E.COLI TRANSCRIPTION ELONGATION COMPLEX BOUND TO PPGPP organism=? DNA sequence DG(B1):DC(A53) DG(B2):DC(A52) DG(B3):DC(A51) DT(B4):DA(A50) DA(B5):DT(A49) DT(B6):DA(A48) DT(B7):DA(A47) DC(B8):DG(A46) DG(B9):DC(A45) DC(B10):DG(A44) DC(B11):DG(A43) DG(B12):DC(A42) DT(B13):DA(A41) DG(B14):DG(A40) DT(B15):DT(A39) DA(B16):DA(A38) DC(B17):DC(A37) chainF (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 15 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (444) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 (445) ASP446 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (450) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 (537) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 (546) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 (566) PRO567 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainG (197) THR212 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIDhlgnRrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegPniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8fvw_G:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYOEM STRUCTURE OF E.COLI TRANSCRIPTION ELONGATION COMPLEX BOUND TO PPGPP organism=? DNA sequence DG(B1):DC(A53) DG(B2):DC(A52) DG(B3):DC(A51) DT(B4):DA(A50) DA(B5):DT(A49) DT(B6):DA(A48) DT(B7):DA(A47) DC(B8):DG(A46) DG(B9):DC(A45) DC(B10):DG(A44) DC(B11):DG(A43) DG(B12):DC(A42) DT(B13):DA(A41) DG(B14):DG(A40) DT(B15):DT(A39) DA(B16):DA(A38) DC(B17):DC(A37) chainG (197) THR212 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8fy9_ABCDEF: title=CRYO-EM STRUCTURE OF CAS1:CAS2-DEDDH:PAM-DEFICIENT PRESPACER COMPLEX organism=? DNA sequence DG(G1):DC(H23) DC(G2):DG(H22) DA(G3):DT(H21) DA(G4):DT(H20) DC(G5):DG(H19) DC(G6):DG(H18) DA(G7):DT(H17) DC(G8):DG(H16) DT(G9):DA(H15) DT(G10):DA(H14) DG(G11):DC(H13) DT(G12):DA(H12) DG(G13):DC(H11) DC(G14):DG(H10) DA(G15):DT(H9) DT(G16):DA(H8) DC(G17):DG(H7) DA(G18):DT(H6) DT(G19):DA(H5) DG(G20):DC(H4) DA(G21):DT(H3) DG(G22):DC(H2) DT(G23):DA(H1) chainA chainB ( 10) HIS29 58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) PRO62 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 10) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 ( 43) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 67) GLU86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainF prot.sequence mpmtvitlknvpqslrgdltrwmqeiatgvyvgnfnsrireylwrrvqetmgageasmcfaarnelgydfltenasrsvidydglplifipke/dratfiyieHakinrvdsavtvaeakgvvripaamigvlllgPgtdishravellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleipeegqieaeplslwddkeklvpygvnyse/piiagksesSelprvedratfiyiehakinrvdsavtvaeakGvvripaamigvlllgpgtdishravellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleip/mpmtvitlkNvpqslrgdltrwmqeiatgvyvgnfnsrireyLwrrvqetmgageasmcfaarnelgydfltenasrsvidydglplifipke/dratfiyieHakinrvdsavtvaeakgvvripaamigvlllgPgtdishravellgdtgtalvwvgEqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleipeegqieaeplslwddkeklvpygvnyse/piiagksesSelprvedratfiyiehakinrvdsavtvaeakGvvripaamigvlllgpgtdishrAvellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleip >8fy9_B: title=CRYO-EM STRUCTURE OF CAS1:CAS2-DEDDH:PAM-DEFICIENT PRESPACER COMPLEX organism=? DNA sequence DA(H1):DT(G23) DC(H2):DG(G22) DT(H3):DA(G21) DC(H4):DG(G20) DA(H5):DT(G19) DT(H6):DA(G18) DG(H7):DC(G17) DA(H8):DT(G16) DT(H9):DA(G15) DG(H10):DC(G14) DC(H11):DG(G13) DA(H12):DT(G12) DC(H13):DG(G11) DA(H14):DT(G10) DA(H15):DT(G9) DG(H16):DC(G8) DT(H17):DA(G7) DG(H18):DC(G6) DG(H19):DC(G5) DT(H20):DA(G4) DT(H21):DA(G3) DG(H22):DC(G2) DC(H23):DG(G1) chainB ( 10) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58 ( 43) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence dratfiyieHakinrvdsavtvaeakgvvripaamigvlllgPgtdishravellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleipeegqieaeplslwddkeklvpygvnyse >8fya_ABCDEF: title=CRYO-EM STRUCTURE OF CAS1:CAS2-DEDDH:PAM-CONTAINING PRESPACER COMPLEX organism=? DNA sequence DG(G1):DC(H23) DC(G2):DG(H22) DA(G3):DT(H21) DA(G4):DT(H20) DC(G5):DG(H19) DC(G6):DG(H18) DA(G7):DT(H17) DC(G8):DG(H16) DT(G9):DA(H15) DT(G10):DA(H14) DG(G11):DC(H13) DT(G12):DA(H12) DG(G13):DC(H11) DC(G14):DG(H10) DA(G15):DT(H9) DT(G16):DA(H8) DC(G17):DG(H7) DA(G18):DT(H6) DT(G19):DA(H5) DG(G20):DC(H4) DA(G21):DT(H3) DG(G22):DC(H2) DT(G23):DA(H1) chainA chainB ( 10) HIS29 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) PRO62 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE ( 10) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 ( 43) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 67) GLU86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainF prot.sequence mpmtvitlknvpqslrgdltrwmqeiatgvyvgnfnsrireylwrrvqetmgageasmcfaarnelgydfltenasrsvidydglplifipke/dratfiyieHakinrvdsavtvaeakgvvripaamigvlllgPgtdishravellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleipeegqieaeplslwddkeklvpygvnyse/agpiiagksEsselprvedratfiyiehakinrvdsavtvaeAkgvvripaamigvlllgpgtdishravellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleipeeeplslwddkeklvpygvnyse/mpmtvitlkNvpqslrgdltrwmqeiatgvyvgnfnsrireyLwrrvqetmgageasmcfaarnelgydfltenasrsvidydglplifipke/dratfiyieHakinrvdsavtvaeakgvvripaamigvlllgPgtdishravellgdtgtalvwvgEqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleipeegqieaeplslwddkeklvpygvnyse/piiagksesSelprvedratfiyiehakinrvdsavtvaeakGvvripaamigvlllgpgtdishrAvellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleip >8fyb_ABCDF: title=CRYO-EM STRUCTURE OF CAS1:CAS2-DEDDH:HALF-SITE INTEGRATION COMPLEX organism=? DNA sequence DA(H1):DT(G22) DA(H2):DT(G21) DC(H4):DG(G20) DG(H5):DC(G19) DG(H6):DC(G18) DA(H7):DT(G17) DG(H8):DC(G16) DA(H9):DT(G15) DC(H10):DG(G14) DC(H11):DG(G13) DT(H12):DA(G12) DG(H13):DC(G11) DG(H14):DC(G10) DT(H15):DA(G9) DC(H16):DG(G8) DT(H17):DA(G7) DC(H18):DG(G6) DA(H19):DT(G5) DA(H20):DT(G4) DT(H21):DA(G3) DC(H22):DG(G2) DT(H23):DA(G1) chainA ( 13) GLN13 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainB ( 10) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 ( 43) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainC chainD chainF prot.sequence mpmtvitlknvpQslrgdltrwmqeiatgvyvgnfnsrireylwrrvqetmgageasmcfaarnelgydfltenasrsvidydglplifipk/dratfiyieHakinrvdsavtvaeakgvvripaamigvlllgPgtdishravellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleipeegqieaeplslwddkeklvpygvnyse/agpiiagksEsselprvedratfiyiehakinrvdsavtvaeAkgvvripaamigvlllgpgtdishravellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleipeegqieaeplslwddkeklvpygvnys/mpmtvitlkNvpqslrgdltrwmqeiatgvyvgnfnsrireyLwrrvqetmgageasmcfaarnelgydfltenasrsvidydglplifipke/agpiiagksEsselprvedratfiyiehakinrvdsavtvaeAkgvvripaamigvlllgpgtdishravellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtllei >8fyc_ABCDFK: title=CRYO-EM STRUCTURE OF CAS1:CAS2-DEDDH:HALF-SITE INTEGRATION COMPLEX LINEAR CRISPR REPEAT CONFORMATION organism=? DNA sequence DA(H1):DT(G22) DA(H3):DT(G21) DC(H4):DG(G20) DG(H5):DC(G19) DG(H6):DC(G18) DA(H7):DT(G17) DG(H8):DC(G16) DA(H9):DT(G15) DC(H10):DG(G14) DC(H11):DG(G13) DT(H12):DA(G12) DG(H13):DC(G10) DT(H15):DA(G9) DC(H16):DG(G8) DT(H17):DA(G7) DC(H18):DG(G6) DA(H19):DT(G5) DA(H20):DT(G4) DT(H21):DA(G3) DT(H23):DA(G1) chainK chainD chainA chainB ( 10) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 ( 43) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainC ( 68) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainF prot.sequence mpmtvitlknvpqslrgdltrwmqeiatgvyvgnfnsrireylwrrvqetmgageasmcfaarnelgydfltenasrsvidydglplifipke/dratfiyieHakinrvdsavtvaeakgvvripaamigvlllgPgtdishravellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleipeegqieaeplslwddkeklvpygvnyse/agpiiagksesselprvedratfiyiehakinrvdsavtvaeakgvvripaamigvlllgpgtdishRavellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleipeegqieaeplslwddkeklvpygvnyse/mpmtvitlknvpqslrgdltrwmqeiatgvyvgnfnsrireylwrrvqetmgageasmcfaarnelgYdfltenasrsvidydglplifipke/magpiiagksesselprvedratfiyiehakinrvdsavtvaeakgvvripaamigvlllgpgtdisHravellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtllei/iryvvidietdgkdakrnhileigaircedgkethftalisgdavppsitkltgitatllqkegqeeKkvltafrefigdddlvgyhvsfdieflrqafkkyglgylknkthdllrivkkeqlfqadykletslqsygihkkvphralgdaelvkclakklnkf >8fyc_B: title=CRYO-EM STRUCTURE OF CAS1:CAS2-DEDDH:HALF-SITE INTEGRATION COMPLEX LINEAR CRISPR REPEAT CONFORMATION organism=? DNA sequence DA(G1):DT(H23) DA(G3):DT(H21) DT(G4):DA(H20) DT(G5):DA(H19) DG(G6):DC(H18) DA(G7):DT(H17) DG(G8):DC(H16) DA(G9):DT(H15) DC(G10):DG(H13) DA(G12):DT(H12) DG(G13):DC(H11) DG(G14):DC(H10) DT(G15):DA(H9) DC(G16):DG(H8) DT(G17):DA(H7) DC(G18):DG(H6) DC(G19):DG(H5) DG(G20):DC(H4) DT(G21):DA(H3) DT(G22):DA(H1) chainB ( 10) HIS29 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) PRO62 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dratfiyieHakinrvdsavtvaeakgvvripaamigvlllgPgtdishravellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleipeegqieaeplslwddkeklvpygvnyse >8fyd_AD: title=CRYO-EM STRUCTURE OF CAS1:CAS2-DEDDH:HALF-SITE INTEGRATION COMPLEX BENT CRISPR REPEAT CONFORMATION organism=? DNA sequence DA(G1):DT(H23) DG(G2):DC(H22) DA(G3):DT(H21) DT(G4):DA(H20) DT(G5):DA(H19) DG(G6):DC(H18) DA(G7):DT(H17) DG(G8):DC(H16) DA(G9):DT(H15) DC(G10):DG(H14) DC(G11):DG(H13) DA(G12):DT(H12) DG(G13):DC(H11) DG(G14):DC(H10) DT(G15):DA(H9) DC(G16):DG(H8) DT(G17):DA(H7) DC(G18):DG(H6) DC(G19):DG(H5) DG(G20):DC(H4) DT(G21):DA(H3) DT(G22):DA(H2) DT(G23):DA(H1) chainA chainD ( 13) GLN13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mpmtvitlknvpqslrgdltrwmqeiatgvyvgnfnsrireylwrrvqetmgageasmcfaarnelgydfltenasrsvidydglplifipke/mpmtvitlknvpQslrgdltrwmqeiatgvyvgnfnsrireylwrrvqetmgageasmcfaarnelgydfltenasrsvidydglplifipke >8fyd_BCF: title=CRYO-EM STRUCTURE OF CAS1:CAS2-DEDDH:HALF-SITE INTEGRATION COMPLEX BENT CRISPR REPEAT CONFORMATION organism=? DNA sequence DA(H1):DT(G23) DA(H2):DT(G22) DA(H3):DT(G21) DC(H4):DG(G20) DG(H5):DC(G19) DG(H6):DC(G18) DA(H7):DT(G17) DG(H8):DC(G16) DA(H9):DT(G15) DC(H10):DG(G14) DC(H11):DG(G13) DT(H12):DA(G12) DG(H13):DC(G11) DG(H14):DC(G10) DT(H15):DA(G9) DC(H16):DG(G8) DT(H17):DA(G7) DC(H18):DG(G6) DA(H19):DT(G5) DA(H20):DT(G4) DT(H21):DA(G3) DC(H22):DG(G2) DT(H23):DA(G1) chainB ( 10) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 ( 43) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 chainC ( 68) ARG69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainF prot.sequence dratfiyieHakinrvdsavtvaeakgvvripaamigvlllgPgtdishravellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtlleipeegqieaeplslwddkeklvpygvnyse/agpiiagksesselprvedratfiyiehakinrvdsavtvaeakgvvripaamigvlllgpgtdishRavellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtl/agpiiagksesselprvedratfiyiehakinrvdsavtvaeakgvvripaamigvlllgpgtdishRavellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtllei >8fyd_C: title=CRYO-EM STRUCTURE OF CAS1:CAS2-DEDDH:HALF-SITE INTEGRATION COMPLEX BENT CRISPR REPEAT CONFORMATION organism=? DNA sequence DA(G1):DT(H23) DG(G2):DC(H22) DA(G3):DT(H21) DT(G4):DA(H20) DT(G5):DA(H19) DG(G6):DC(H18) DA(G7):DT(H17) DG(G8):DC(H16) DA(G9):DT(H15) DC(G10):DG(H14) DC(G11):DG(H13) DA(G12):DT(H12) DG(G13):DC(H11) DG(G14):DC(H10) DT(G15):DA(H9) DC(G16):DG(H8) DT(G17):DA(H7) DC(G18):DG(H6) DC(G19):DG(H5) DG(G20):DC(H4) DT(G21):DA(H3) DT(G22):DA(H2) DT(G23):DA(H1) chainC ( 68) ARG69 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence agpiiagksesselprvedratfiyiehakinrvdsavtvaeakgvvripaamigvlllgpgtdishRavellgdtgtalvwvgeqgvryyasgralarstrflvkqaelvtnersrlrvarrmyqmrfptedvskltmqqlrshegarvrrkyrelskkynvpwkkrvynpddfaggdpinqalsaahvalyglvhsvvaalglspglgfvhtghdrsfiydvadlykaeitvpiafavaaeaeegqdigqlarlrtrdafvdgkilkrmvkdlqtl >8fzt_E: title=SPCAS9 WITH DUAL-GUIDE RNA AND TARGET DNA organism=? DNA sequence DT(D21):DA(C8) DG(D22):DC(C7) DG(D23):DC(C6) DC(D24):DG(C5) DG(D25):DC(C4) DA(D26):DT(C3) DT(D27):DA(C2) DT(D28):DA(C1) DA(D29):DT(C0) DG(D30):DC(C-1) chainE (1067) LYS1107 1 2 0 0 0 0 0 0 0 0 (1179) GLU1219 0 1 0 0 0 0 0 0 0 0 (1288) ARG1333 4 2 0 0 0 0 0 0 0 0 (1290) ARG1335 0 5 4 1 0 0 0 0 0 0 prot.sequence kkysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsdslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarnsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdhivpqsflkdidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdgkatakyffysnimnffkteitirkrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagElqkgnelalpskyvnflylashyepedneqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsq >8g00_IJ:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYO-EM STRUCTURE OF 3DVA COMPONENT 0 OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE MINUS PREQ1 LIGAND organism=? DNA sequence DC(A9):DT(B19) DG(A10):DG(B18) DT(A11):DC(B17) DC(A12):DT(B16) DC(A13):DC(B15) DG(A25):DC(B14) DA(A26):DT(B13) DA(A27):DT(B12) DG(A28):DC(B11) DA(A29):DT(B10) DG(A30):DC(B9) DA(A31):DT(B8) DT(A32):DA(B7) DT(A33):DA(B6) DC(A34):DG(B5) DA(A35):DT(B4) DG(A36):DC(B3) DA(A37):DT(B2) DG(A38):DC(B1) chainI (162) LYS163 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 25) LYS40 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG47 2 20 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgKthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkKpetinyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8g00_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF 3DVA COMPONENT 0 OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE MINUS PREQ1 LIGAND organism=? DNA sequence DC(B1):DG(A38) DT(B2):DA(A37) DC(B3):DG(A36) DT(B4):DA(A35) DG(B5):DC(A34) DA(B6):DT(A33) DA(B7):DT(A32) DT(B8):DA(A31) DC(B9):DG(A30) DT(B10):DA(A29) DC(B11):DG(A28) DT(B12):DA(A27) DT(B13):DA(A26) DC(B14):DG(A25) DC(B15):DC(A13) DT(B16):DC(A12) DC(B17):DT(A11) DG(B18):DG(A10) DT(B19):DC(A9) chainJ ( 25) LYS40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 ( 32) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 20 2 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkKpetinyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8g0z_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTANT BACTERIOPHAGE T4 GP41 HELICASE HEXAMER BOUND WITH SINGLE STRAND DNA AND ATPGAMMAS IN THE STALLED PRIMOSOME organism=? DNA sequence DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) DT(M17) chainA (322) ARG322 0 1 0 0 0 0 0 0 0 0 0 0 chainB chainC (327) ASN327 0 0 0 0 0 1 1 0 0 0 0 0 chainD (327) ASN327 0 0 0 0 4 0 0 0 0 0 0 0 chainE (327) ASN327 0 0 5 0 0 0 0 0 0 0 0 0 chainF (327) ASN327 9 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscriRvysensyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscriRvysensyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie >8g0z_E:P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTANT BACTERIOPHAGE T4 GP41 HELICASE HEXAMER BOUND WITH SINGLE STRAND DNA AND ATPGAMMAS IN THE STALLED PRIMOSOME organism=? DNA sequence DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) DT(M17) chainE (327) ASN327 0 0 5 0 0 0 0 0 0 0 0 0 prot.sequence mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie >8g1i_A: title=SPCAS9 WITH SGRNA AND TARGET DNA organism=? DNA sequence DT(D31):DA(C10) DG(D32):DC(C9) DG(D33):DC(C8) DC(D34):DG(C7) DG(D35):DC(C6) DA(D36):DT(C5) DT(D37):DA(C4) DT(D38):DA(C3) DA(D39):DT(C2) DG(D40):DC(C1) chainA (1052) LYS1107 1 2 0 0 0 0 0 0 0 0 (1267) ARG1333 8 2 0 0 0 0 0 0 0 0 (1269) ARG1335 0 6 4 1 0 0 0 0 0 0 prot.sequence kysigldigtnsvgwavitdeykvpskkfkvlgntdrhsikknligallfdsgetaeatrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgnivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnlialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaillsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveiaslgtyhdllkiikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqslhehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarnsrermkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdhivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqlnaklirkfdnltkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlksklvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdgkatakyffysnimnffkteikrplietngetgeivwdkgrdfatvrkvlsmpqvnivkktevqtggfsKesilpkrnsdkliarkkdwdpkkyggfdsptvaysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkyslfelengrkrmlasagelqkgnelalpskyvnflylasheqkqlfveqhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapaafkyfdttidRkRytstkevldatlihqsitglyetridlsq >8g1s_IJ: title=CRYO-EM STRUCTURE OF 3DVA COMPONENT 1 OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE MINUS PREQ1 LIGAND organism=? DNA sequence DG(A10):DG(B18) DT(A11):DC(B17) DC(A12):DT(B16) DC(A13):DC(B15) DG(A26):DC(B14) DA(A27):DT(B13) DA(A28):DT(B12) DG(A29):DC(B11) DA(A30):DT(B10) DG(A31):DC(B9) DA(A32):DT(B8) DT(A33):DA(B7) DT(A34):DA(B6) DC(A35):DG(B5) DA(A36):DT(B4) DG(A37):DC(B3) DA(A38):DT(B2) DG(A39):DC(B1) chainI (540) GLU541 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 27) GLU42 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG47 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) THR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (337) ARG352 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpEtinyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8g1s_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF 3DVA COMPONENT 1 OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE MINUS PREQ1 LIGAND organism=? DNA sequence DC(B1):DG(A39) DT(B2):DA(A38) DC(B3):DG(A37) DT(B4):DA(A36) DG(B5):DC(A35) DA(B6):DT(A34) DA(B7):DT(A33) DT(B8):DA(A32) DC(B9):DG(A31) DT(B10):DA(A30) DC(B11):DG(A29) DT(B12):DA(A28) DT(B13):DA(A27) DC(B14):DG(A26) chainJ (197) THR212 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8g2w_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF 3DVA COMPONENT 2 OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE MINUS PREQ1 LIGAND organism=? DNA sequence DC(A9):DT(B19) DG(A10):DG(B18) DT(A11):DC(B17) DC(A12):DT(B16) DC(A13):DC(B15) DG(A25):DC(B14) DA(A26):DT(B13) DA(A27):DT(B12) DG(A28):DC(B11) DA(A29):DT(B10) DG(A30):DC(B9) DA(A31):DT(B8) DT(A32):DA(B7) DT(A33):DA(B6) DC(A34):DG(B5) DA(A35):DT(B4) DG(A36):DC(B3) DA(A37):DT(B2) DG(A38):DC(B1) chainI (540) GLU541 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >8g2w_IJ: title=CRYO-EM STRUCTURE OF 3DVA COMPONENT 2 OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE MINUS PREQ1 LIGAND organism=? DNA sequence DC(A9):DT(B19) DG(A10):DG(B18) DT(A11):DC(B17) DC(A12):DT(B16) DC(A13):DC(B15) DG(A25):DC(B14) DA(A26):DT(B13) DA(A27):DT(B12) DG(A28):DC(B11) DA(A29):DT(B10) DG(A30):DC(B9) DA(A31):DT(B8) DT(A32):DA(B7) DT(A33):DA(B6) DC(A34):DG(B5) DA(A35):DT(B4) DG(A36):DC(B3) DA(A37):DT(B2) DG(A38):DC(B1) chainI (540) GLU541 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 25) LYS40 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ASN45 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG47 0 11 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkKpetiNyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8g4w_IJ: title=CRYO-EM CONSENSUS STRUCTURE OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE PLUS PREQ1 LIGAND organism=? DNA sequence DC(A9):DT(B19) DG(A10):DG(B18) DT(A11):DC(B17) DC(A12):DT(B16) DC(A13):DC(B15) DG(A25):DC(B14) DA(A26):DT(B13) DA(A27):DT(B12) DG(A28):DC(B11) DA(A29):DT(B10) DG(A30):DC(B9) DA(A31):DT(B8) DT(A32):DA(B7) DT(A33):DA(B6) DC(A34):DG(B5) DA(A35):DT(B4) DG(A36):DC(B3) DA(A37):DT(B2) DG(A38):DC(B1) chainI (162) LYS163 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 32) ARG47 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgKthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpetinyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8g4w_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM CONSENSUS STRUCTURE OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE PLUS PREQ1 LIGAND organism=? DNA sequence DC(A9):DT(B19) DG(A10):DG(B18) DT(A11):DC(B17) DC(A12):DT(B16) DC(A13):DC(B15) DG(A25):DC(B14) DA(A26):DT(B13) DA(A27):DT(B12) DG(A28):DC(B11) DA(A29):DT(B10) DG(A30):DC(B9) DA(A31):DT(B8) DT(A32):DA(B7) DT(A33):DA(B6) DC(A34):DG(B5) DA(A35):DT(B4) DG(A36):DC(B3) DA(A37):DT(B2) DG(A38):DC(B1) chainJ ( 32) ARG47 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8g57_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF NUCLEOSOME-BOUND SIRTUIN 6 DEACETYLASE organism=? DNA sequence DT(I22):DA(J150) DG(I23):DC(J149) DC(I24):DG(J148) DA(I25):DT(J147) DC(I26):DG(J146) DA(I27):DT(J145) DG(I28):DC(J144) DG(I29):DC(J143) DA(I30):DT(J142) DT(I31):DA(J141) DG(I32):DC(J140) DT(I33):DA(J139) DA(I34):DT(J138) DT(I35):DA(J137) DA(I36):DT(J136) DT(I37):DA(J135) DA(I38):DT(J134) DT(I39):DA(J133) DC(I40):DG(J132) DT(I41):DA(J131) DG(I42):DC(J130) DA(I43):DT(J129) DC(I44):DG(J128) DA(I45):DT(J127) DC(I46):DG(J126) DG(I47):DC(J125) DT(I48):DA(J124) DG(I49):DC(J123) DC(I50):DG(J122) DC(I51):DG(J121) DT(I52):DA(J120) DG(I53):DC(J119) DG(I54):DC(J118) DA(I55):DT(J117) DG(I56):DC(J116) DA(I57):DT(J115) DC(I58):DG(J114) DT(I59):DA(J113) DA(I60):DT(J112) DG(I61):DC(J111) DG(I62):DC(J110) DG(I63):DC(J109) DA(I64):DT(J108) DG(I65):DC(J107) DT(I66):DA(J106) DA(I67):DT(J105) DA(I68):DT(J104) DT(I69):DA(J103) DC(I70):DG(J102) DC(I71):DG(J101) DC(I72):DG(J100) DC(I73):DG(J99) DT(I74):DA(J98) DT(I75):DA(J97) DG(I76):DC(J96) DG(I77):DC(J95) DC(I78):DG(J94) DG(I79):DC(J93) DG(I80):DC(J92) DT(I81):DA(J91) DT(I82):DA(J90) DA(I83):DT(J89) DA(I84):DT(J88) DA(I85):DT(J87) DA(I86):DT(J86) DC(I87):DG(J85) DG(I88):DC(J84) DC(I89):DG(J83) DG(I90):DC(J82) DG(I91):DC(J81) DG(I92):DC(J80) DG(I93):DC(J79) DG(I94):DC(J78) DA(I95):DT(J77) DC(I96):DG(J76) DA(I97):DT(J75) DG(I98):DC(J74) DC(I99):DG(J73) DG(I100):DC(J72) DC(I101):DG(J71) DG(I102):DC(J70) DT(I103):DA(J69) DA(I104):DT(J68) DC(I105):DG(J67) DG(I106):DC(J66) DT(I107):DA(J65) DG(I108):DC(J64) DC(I109):DG(J63) DG(I110):DC(J62) DT(I111):DA(J61) DT(I112):DA(J60) DT(I113):DA(J59) DA(I114):DT(J58) DA(I115):DT(J57) DG(I116):DC(J56) DC(I117):DG(J55) DG(I118):DC(J54) DG(I119):DC(J53) DT(I120):DA(J52) DG(I121):DC(J51) DC(I122):DG(J50) DT(I123):DA(J49) DA(I124):DT(J48) DG(I125):DC(J47) DA(I126):DT(J46) DG(I127):DC(J45) DC(I128):DG(J44) DT(I129):DA(J43) DG(I130):DC(J42) DT(I131):DA(J41) DC(I132):DG(J40) DT(I133):DA(J39) DA(I134):DT(J38) DC(I135):DG(J37) DG(I136):DC(J36) DA(I137):DT(J35) DC(I138):DG(J34) DC(I139):DG(J33) DA(I140):DT(J32) DA(I141):DT(J31) DT(I142):DA(J30) DT(I143):DA(J29) DG(I144):DC(J28) DA(I145):DT(J27) DG(I146):DC(J26) DC(I147):DG(J25) DG(I148):DC(J24) DG(I149):DC(J23) DC(I150):DG(J22) DC(I151):DG(J21) DT(I152):DA(J20) DC(I153):DG(J19) DG(I154):DC(J18) DG(I155):DC(J17) DC(I156):DG(J16) DA(I157):DT(J15) DC(I158):DG(J14) DC(I159):DG(J13) DG(I160):DC(J12) DG(I161):DC(J11) DG(I162):DC(J10) DA(I163):DT(J9) DT(I164):DA(J8) DT(I165):DA(J7) DC(I166):DG(J6) DT(I167):DA(J5) DC(I168):DG(J4) DG(I169):DC(J3) DA(I170):DT(J2) DT(I171):DA(J1) chainA ( 2) LYS4 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tKqtarkstgkkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/hRkvlrdniqgitkPairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkt/krsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/kkpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/rkvLRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvIrdavtytehakrktvtamdvvyalkrqgrtlygfgg/rakAKtrssraglqfpvgrvhrllrkgnyservgagapvylaavleyLtaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkteshhkakg/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >8g57_E:Histone-fold; title=STRUCTURE OF NUCLEOSOME-BOUND SIRTUIN 6 DEACETYLASE organism=? DNA sequence DA(J1):DT(I171) DT(J2):DA(I170) DC(J3):DG(I169) DG(J4):DC(I168) DA(J5):DT(I167) DG(J6):DC(I166) DA(J7):DT(I165) DA(J8):DT(I164) DT(J9):DA(I163) DC(J10):DG(I162) DC(J11):DG(I161) DC(J12):DG(I160) DG(J13):DC(I159) DG(J14):DC(I158) DT(J15):DA(I157) DG(J16):DC(I156) DC(J17):DG(I155) DC(J18):DG(I154) DG(J19):DC(I153) DA(J20):DT(I152) DG(J21):DC(I151) DG(J22):DC(I150) DC(J23):DG(I149) DC(J24):DG(I148) DG(J25):DC(I147) DC(J26):DG(I146) DT(J27):DA(I145) DC(J28):DG(I144) DA(J29):DT(I143) DA(J30):DT(I142) DT(J31):DA(I141) DT(J32):DA(I140) DG(J33):DC(I139) DG(J34):DC(I138) DT(J35):DA(I137) DC(J36):DG(I136) DG(J37):DC(I135) DT(J38):DA(I134) DA(J39):DT(I133) DG(J40):DC(I132) DA(J41):DT(I131) DC(J42):DG(I130) DA(J43):DT(I129) DG(J44):DC(I128) DC(J45):DG(I127) DT(J46):DA(I126) DC(J47):DG(I125) DT(J48):DA(I124) DA(J49):DT(I123) DG(J50):DC(I122) DC(J51):DG(I121) DA(J52):DT(I120) DC(J53):DG(I119) DC(J54):DG(I118) DG(J55):DC(I117) DC(J56):DG(I116) DT(J57):DA(I115) DT(J58):DA(I114) DA(J59):DT(I113) DA(J60):DT(I112) DA(J61):DT(I111) DC(J62):DG(I110) DG(J63):DC(I109) DC(J64):DG(I108) DA(J65):DT(I107) DC(J66):DG(I106) DG(J67):DC(I105) DT(J68):DA(I104) DA(J69):DT(I103) DC(J70):DG(I102) DG(J71):DC(I101) DC(J72):DG(I100) DG(J73):DC(I99) DC(J74):DG(I98) DT(J75):DA(I97) DG(J76):DC(I96) DT(J77):DA(I95) DC(J78):DG(I94) DC(J79):DG(I93) DC(J80):DG(I92) DC(J81):DG(I91) DC(J82):DG(I90) DG(J83):DC(I89) DC(J84):DG(I88) DG(J85):DC(I87) DT(J86):DA(I86) DT(J87):DA(I85) DT(J88):DA(I84) DT(J89):DA(I83) DA(J90):DT(I82) DA(J91):DT(I81) DC(J92):DG(I80) DC(J93):DG(I79) DG(J94):DC(I78) DC(J95):DG(I77) DC(J96):DG(I76) DA(J97):DT(I75) DA(J98):DT(I74) DG(J99):DC(I73) DG(J100):DC(I72) DG(J101):DC(I71) DG(J102):DC(I70) DA(J103):DT(I69) DT(J104):DA(I68) DT(J105):DA(I67) DA(J106):DT(I66) DC(J107):DG(I65) DT(J108):DA(I64) DC(J109):DG(I63) DC(J110):DG(I62) DC(J111):DG(I61) DT(J112):DA(I60) DA(J113):DT(I59) DG(J114):DC(I58) DT(J115):DA(I57) DC(J116):DG(I56) DT(J117):DA(I55) DC(J118):DG(I54) DC(J119):DG(I53) DA(J120):DT(I52) DG(J121):DC(I51) DG(J122):DC(I50) DC(J123):DG(I49) DA(J124):DT(I48) DC(J125):DG(I47) DG(J126):DC(I46) DT(J127):DA(I45) DG(J128):DC(I44) DT(J129):DA(I43) DC(J130):DG(I42) DA(J131):DT(I41) DG(J132):DC(I40) DA(J133):DT(I39) DT(J134):DA(I38) DA(J135):DT(I37) DT(J136):DA(I36) DA(J137):DT(I35) DT(J138):DA(I34) DA(J139):DT(I33) DC(J140):DG(I32) DA(J141):DT(I31) DT(J142):DA(I30) DC(J143):DG(I29) DC(J144):DG(I28) DT(J145):DA(I27) DG(J146):DC(I26) DT(J147):DA(I25) DG(J148):DC(I24) DC(J149):DG(I23) DA(J150):DT(I22) chainE ( 4) HIS39 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 48) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >8g7e_IJ: title=CRYO-EM STRUCTURE OF 3DVA COMPONENT 0 OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE PLUS PREQ1 LIGAND organism=? DNA sequence DC(B1):DG(A38) DT(B2):DA(A37) DC(B3):DG(A36) DT(B4):DA(A35) DG(B5):DC(A34) DA(B6):DT(A33) DA(B7):DT(A32) DT(B8):DA(A31) DC(B9):DG(A30) DT(B10):DA(A29) DC(B11):DG(A28) DT(B12):DA(A27) DT(B13):DA(A26) DC(B14):DG(A25) DC(B15):DC(A13) DT(B16):DC(A12) DC(B17):DT(A11) DG(B18):DG(A10) DT(B19):DC(A9) chainI (162) LYS163 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 chainJ ( 27) GLU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 ( 32) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgKthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpEtinyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8g7e_J:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF 3DVA COMPONENT 0 OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE PLUS PREQ1 LIGAND organism=? DNA sequence DC(A9):DT(B19) DG(A10):DG(B18) DT(A11):DC(B17) DC(A12):DT(B16) DC(A13):DC(B15) DG(A25):DC(B14) DA(A26):DT(B13) DA(A27):DT(B12) DG(A28):DC(B11) DA(A29):DT(B10) DG(A30):DC(B9) DA(A31):DT(B8) DT(A32):DA(B7) DT(A33):DA(B6) DC(A34):DG(B5) DA(A35):DT(B4) DG(A36):DC(B3) DA(A37):DT(B2) DG(A38):DC(B1) chainJ ( 27) GLU42 0 0 1 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG47 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpEtinyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8g86_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=HUMAN OCT4 BOUND TO NUCLEOSOME WITH HUMAN NMATN1 SEQUENCE (FOCUSED REFINEMENT OF NUCLEOSOME) organism=? DNA sequence DT(I-71):DA(J71) DG(I-70):DC(J70) DC(I-69):DG(J69) DA(I-68):DT(J68) DC(I-67):DG(J67) DA(I-66):DT(J66) DC(I-65):DG(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DG(I-62):DC(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DA(I-59):DT(J59) DA(I-58):DT(J58) DT(I-57):DA(J57) DA(I-56):DT(J56) DT(I-55):DA(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DA(I-48):DT(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DT(I-44):DA(J44) DG(I-43):DC(J43) DC(I-42):DG(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DA(I-39):DT(J39) DC(I-38):DG(J38) DA(I-37):DT(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DT(I-34):DA(J34) DT(I-33):DA(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DT(I-30):DA(J30) DA(I-29):DT(J29) DT(I-28):DA(J28) DA(I-27):DT(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DC(I-22):DG(J22) DA(I-21):DT(J21) DT(I-20):DA(J20) DA(I-19):DT(J19) DC(I-18):DG(J18) DA(I-17):DT(J17) DC(I-16):DG(J16) DA(I-15):DT(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DA(I-11):DT(J11) DT(I-10):DA(J10) DG(I-9):DC(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DC(I-6):DG(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DC(I0):DG(J0) DG(I1):DC(J-1) DT(I2):DA(J-2) DG(I3):DC(J-3) DC(I4):DG(J-4) DA(I5):DT(J-5) DC(I6):DG(J-6) DA(I7):DT(J-7) DC(I8):DG(J-8) DA(I9):DT(J-9) DT(I10):DA(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DA(I13):DT(J-13) DT(I14):DA(J-14) DG(I15):DC(J-15) DC(I16):DG(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DA(I19):DT(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DT(I24):DA(J-24) DG(I25):DC(J-25) DC(I26):DG(J-26) DA(I27):DT(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DC(I30):DG(J-30) DA(I31):DT(J-31) DC(I32):DG(J-32) DG(I33):DC(J-33) DT(I34):DA(J-34) DA(I35):DT(J-35) DT(I36):DA(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DG(I39):DC(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DA(I43):DT(J-43) DC(I44):DG(J-44) DA(I45):DT(J-45) DC(I46):DG(J-46) DA(I47):DT(J-47) DT(I48):DA(J-48) DG(I49):DC(J-49) DC(I50):DG(J-50) DA(I51):DT(J-51) DC(I52):DG(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DG(I55):DC(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DT(I58):DA(J-58) DG(I59):DC(J-59) DC(I60):DG(J-60) DG(I61):DC(J-61) DC(I62):DG(J-62) DA(I63):DT(J-63) DC(I64):DG(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DG(I68):DC(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DA(I71):DT(J-71) DC(I72):DG(J-72) DA(I73):DT(J-73) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/lRDNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >8g86_D:Histone-fold; title=HUMAN OCT4 BOUND TO NUCLEOSOME WITH HUMAN NMATN1 SEQUENCE (FOCUSED REFINEMENT OF NUCLEOSOME) organism=? DNA sequence DT(J-73):DA(I73) DG(J-72):DC(I72) DT(J-71):DA(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DC(J-68):DG(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DG(J-64):DC(I64) DT(J-63):DA(I63) DG(J-62):DC(I62) DC(J-61):DG(I61) DG(J-60):DC(I60) DC(J-59):DG(I59) DA(J-58):DT(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DC(J-55):DG(I55) DA(J-54):DT(I54) DT(J-53):DA(I53) DG(J-52):DC(I52) DT(J-51):DA(I51) DG(J-50):DC(I50) DC(J-49):DG(I49) DA(J-48):DT(I48) DT(J-47):DA(I47) DG(J-46):DC(I46) DT(J-45):DA(I45) DG(J-44):DC(I44) DT(J-43):DA(I43) DG(J-42):DC(I42) DT(J-41):DA(I41) DG(J-40):DC(I40) DC(J-39):DG(I39) DA(J-38):DT(I38) DT(J-37):DA(I37) DA(J-36):DT(I36) DT(J-35):DA(I35) DA(J-34):DT(I34) DC(J-33):DG(I33) DG(J-32):DC(I32) DT(J-31):DA(I31) DG(J-30):DC(I30) DT(J-29):DA(I29) DG(J-28):DC(I28) DT(J-27):DA(I27) DG(J-26):DC(I26) DC(J-25):DG(I25) DA(J-24):DT(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DC(J-21):DG(I21) DA(J-20):DT(I20) DT(J-19):DA(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DG(J-16):DC(I16) DC(J-15):DG(I15) DA(J-14):DT(I14) DT(J-13):DA(I13) DA(J-12):DT(I12) DT(J-11):DA(I11) DA(J-10):DT(I10) DT(J-9):DA(I9) DG(J-8):DC(I8) DT(J-7):DA(I7) DG(J-6):DC(I6) DT(J-5):DA(I5) DG(J-4):DC(I4) DC(J-3):DG(I3) DA(J-2):DT(I2) DC(J-1):DG(I1) DG(J0):DC(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DG(J6):DC(I-6) DT(J7):DA(I-7) DG(J8):DC(I-8) DC(J9):DG(I-9) DA(J10):DT(I-10) DT(J11):DA(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DG(J14):DC(I-14) DT(J15):DA(I-15) DG(J16):DC(I-16) DT(J17):DA(I-17) DG(J18):DC(I-18) DT(J19):DA(I-19) DA(J20):DT(I-20) DT(J21):DA(I-21) DG(J22):DC(I-22) DT(J23):DA(I-23) DG(J24):DC(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DT(J27):DA(I-27) DA(J28):DT(I-28) DT(J29):DA(I-29) DA(J30):DT(I-30) DT(J31):DA(I-31) DT(J32):DA(I-32) DA(J33):DT(I-33) DA(J34):DT(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DT(J37):DA(I-37) DG(J38):DC(I-38) DT(J39):DA(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DG(J42):DC(I-42) DC(J43):DG(I-43) DA(J44):DT(I-44) DT(J45):DA(I-45) DT(J46):DA(I-46) DG(J47):DC(I-47) DT(J48):DA(I-48) DG(J49):DC(I-49) DT(J50):DA(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DA(J53):DT(I-53) DT(J54):DA(I-54) DA(J55):DT(I-55) DT(J56):DA(I-56) DA(J57):DT(I-57) DT(J58):DA(I-58) DT(J59):DA(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DC(J62):DG(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DG(J65):DC(I-65) DT(J66):DA(I-66) DG(J67):DC(I-67) DT(J68):DA(I-68) DG(J69):DC(I-69) DC(J70):DG(I-70) DA(J71):DT(I-71) chainD ( 2) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >8g87_X:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=HUMAN OCT4 BOUND TO NUCLEOSOME WITH HUMAN NMATN1 SEQUENCE (FOCUSED REFINEMENT OF OCT4 BOUND REGION) organism=? DNA sequence DC(I80):DG(J-80) DA(I81):DT(J-81) DC(I82):DG(J-82) DA(I83):DT(J-83) DC(I84):DG(J-84) DA(I85):DT(J-85) DT(I86):DA(J-86) DT(I87):DA(J-87) DA(I88):DT(J-88) DG(I89):DC(J-89) DC(I90):DG(J-90) DA(I91):DT(J-91) DT(I92):DA(J-92) DA(I93):DT(J-93) DT(I94):DA(J-94) DG(I95):DC(J-95) DC(I96):DG(J-96) chainX ( 41) SER180 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 42) GLN181 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 ( 43) THR182 0 0 0 0 0 0 0 0 0 5 6 3 0 0 0 0 0 ( 46) CYS185 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 ( 47) ARG186 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 (120) VAL276 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (123) CYS279 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (124) ASN280 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 0 (127) GLN283 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (131) ARG287 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence kalqkeleqfakllkqkritlgytqadvgltlgvlfgkvfSQTtiCRfealqlsfknmcklrpllqkwveeadnnenlqeienrvrgnlenlflqcpkptlqqishiaqqlglekdvvrVwfCNrrQkgkRs >8g88_F:Histone-fold; title=HUMAN OCT4 BOUND TO NUCLEOSOME WITH HUMAN NMATN1 SEQUENCE organism=? DNA sequence DT(I-71):DA(J71) DG(I-70):DC(J70) DC(I-69):DG(J69) DA(I-68):DT(J68) DC(I-67):DG(J67) DA(I-66):DT(J66) DC(I-65):DG(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DG(I-62):DC(J62) DC(I-61):DG(J61) DT(I-60):DA(J60) DA(I-59):DT(J59) DA(I-58):DT(J58) DT(I-57):DA(J57) DA(I-56):DT(J56) DT(I-55):DA(J55) DA(I-54):DT(J54) DT(I-53):DA(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DA(I-50):DT(J50) DC(I-49):DG(J49) DA(I-48):DT(J48) DC(I-47):DG(J47) DA(I-46):DT(J46) DA(I-45):DT(J45) DT(I-44):DA(J44) DG(I-43):DC(J43) DC(I-42):DG(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DA(I-39):DT(J39) DC(I-38):DG(J38) DA(I-37):DT(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DT(I-34):DA(J34) DT(I-33):DA(J33) DA(I-32):DT(J32) DA(I-31):DT(J31) DT(I-30):DA(J30) DA(I-29):DT(J29) DT(I-28):DA(J28) DA(I-27):DT(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DC(I-24):DG(J24) DA(I-23):DT(J23) DC(I-22):DG(J22) DA(I-21):DT(J21) DT(I-20):DA(J20) DA(I-19):DT(J19) DC(I-18):DG(J18) DA(I-17):DT(J17) DC(I-16):DG(J16) DA(I-15):DT(J15) DC(I-14):DG(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DA(I-11):DT(J11) DT(I-10):DA(J10) DG(I-9):DC(J9) DC(I-8):DG(J8) DA(I-7):DT(J7) DC(I-6):DG(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DC(I0):DG(J0) DG(I1):DC(J-1) DT(I2):DA(J-2) DG(I3):DC(J-3) DC(I4):DG(J-4) DA(I5):DT(J-5) DC(I6):DG(J-6) DA(I7):DT(J-7) DC(I8):DG(J-8) DA(I9):DT(J-9) DT(I10):DA(J-10) DA(I11):DT(J-11) DT(I12):DA(J-12) DA(I13):DT(J-13) DT(I14):DA(J-14) DG(I15):DC(J-15) DC(I16):DG(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DA(I19):DT(J-19) DT(I20):DA(J-20) DG(I21):DC(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DT(I24):DA(J-24) DG(I25):DC(J-25) DC(I26):DG(J-26) DA(I27):DT(J-27) DC(I28):DG(J-28) DA(I29):DT(J-29) DC(I30):DG(J-30) DA(I31):DT(J-31) DC(I32):DG(J-32) DG(I33):DC(J-33) DT(I34):DA(J-34) DA(I35):DT(J-35) DT(I36):DA(J-36) DA(I37):DT(J-37) DT(I38):DA(J-38) DG(I39):DC(J-39) DC(I40):DG(J-40) DA(I41):DT(J-41) DC(I42):DG(J-42) DA(I43):DT(J-43) DC(I44):DG(J-44) DA(I45):DT(J-45) DC(I46):DG(J-46) DA(I47):DT(J-47) DT(I48):DA(J-48) DG(I49):DC(J-49) DC(I50):DG(J-50) DA(I51):DT(J-51) DC(I52):DG(J-52) DA(I53):DT(J-53) DT(I54):DA(J-54) DG(I55):DC(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DT(I58):DA(J-58) DG(I59):DC(J-59) DC(I60):DG(J-60) DG(I61):DC(J-61) DC(I62):DG(J-62) DA(I63):DT(J-63) DC(I64):DG(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DG(I68):DC(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DA(I71):DT(J-71) DC(I72):DG(J-72) DA(I73):DT(J-73) DC(I74):DG(J-74) DA(I75):DT(J-75) DC(I76):DG(J-76) DA(I77):DT(J-77) DT(I78):DA(J-78) DG(I79):DC(J-79) DC(I80):DG(J-80) DA(I81):DT(J-81) DC(I82):DG(J-82) DA(I83):DT(J-83) DC(I84):DG(J-84) DA(I85):DT(J-85) DT(I86):DA(J-86) DT(I87):DA(J-87) DA(I88):DT(J-88) DG(I89):DC(J-89) DC(I90):DG(J-90) DA(I91):DT(J-91) DT(I92):DA(J-92) DA(I93):DT(J-93) DT(I94):DA(J-94) DG(I95):DC(J-95) DC(I96):DG(J-96) chainF ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >8g8b_C:Histone-fold; title=NUCLEOSOME WITH HUMAN NMATN1 SEQUENCE IN COMPLEX WITH HUMAN OCT4 organism=? DNA sequence DC(J-96):DG(I96) DA(J-95):DT(I95) DT(J-94):DA(I94) DA(J-93):DT(I93) DT(J-92):DA(I92) DG(J-91):DC(I91) DC(J-90):DG(I90) DT(J-89):DA(I89) DA(J-88):DT(I88) DA(J-87):DT(I87) DT(J-86):DA(I86) DG(J-85):DC(I85) DT(J-84):DA(I84) DG(J-83):DC(I83) DT(J-82):DA(I82) DG(J-81):DC(I81) DC(J-80):DG(I80) DA(J-79):DT(I79) DT(J-78):DA(I78) DG(J-77):DC(I77) DT(J-76):DA(I76) DG(J-75):DC(I75) DT(J-74):DA(I74) DG(J-73):DC(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DA(J-70):DT(I70) DC(J-69):DG(I69) DT(J-68):DA(I68) DA(J-67):DT(I67) DT(J-66):DA(I66) DG(J-65):DC(I65) DT(J-64):DA(I64) DG(J-63):DC(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DC(J-60):DG(I60) DA(J-59):DT(I59) DT(J-58):DA(I58) DG(J-57):DC(I57) DC(J-56):DG(I56) DA(J-55):DT(I55) DT(J-54):DA(I54) DG(J-53):DC(I53) DT(J-52):DA(I52) DG(J-51):DC(I51) DC(J-50):DG(I50) DA(J-49):DT(I49) DT(J-48):DA(I48) DG(J-47):DC(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DT(J-44):DA(I44) DG(J-43):DC(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DC(J-40):DG(I40) DA(J-39):DT(I39) DT(J-38):DA(I38) DA(J-37):DT(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DC(J-34):DG(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DG(J-31):DC(I31) DT(J-30):DA(I30) DG(J-29):DC(I29) DT(J-28):DA(I28) DG(J-27):DC(I27) DC(J-26):DG(I26) DA(J-25):DT(I25) DT(J-24):DA(I24) DG(J-23):DC(I23) DC(J-22):DG(I22) DA(J-21):DT(I21) DT(J-20):DA(I20) DG(J-19):DC(I19) DT(J-18):DA(I18) DG(J-17):DC(I17) DC(J-16):DG(I16) DA(J-15):DT(I15) DT(J-14):DA(I14) DA(J-13):DT(I13) DT(J-12):DA(I12) DA(J-11):DT(I11) DT(J-10):DA(I10) DG(J-9):DC(I9) DT(J-8):DA(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DG(J-5):DC(I5) DC(J-4):DG(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DT(J0):DA(I0) DG(J1):DC(I-1) DT(J2):DA(I-2) DG(J3):DC(I-3) DT(J4):DA(I-4) DG(J5):DC(I-5) DT(J6):DA(I-6) DG(J7):DC(I-7) DC(J8):DG(I-8) DA(J9):DT(I-9) DT(J10):DA(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DG(J13):DC(I-13) DT(J14):DA(I-14) DG(J15):DC(I-15) DT(J16):DA(I-16) DG(J17):DC(I-17) DT(J18):DA(I-18) DA(J19):DT(I-19) DT(J20):DA(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DT(J24):DA(I-24) DA(J25):DT(I-25) DT(J26):DA(I-26) DA(J27):DT(I-27) DT(J28):DA(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DA(J33):DT(I-33) DC(J34):DG(I-34) DC(J35):DG(I-35) DT(J36):DA(I-36) DG(J37):DC(I-37) DT(J38):DA(I-38) DG(J39):DC(I-39) DT(J40):DA(I-40) DG(J41):DC(I-41) DC(J42):DG(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DT(J47):DA(I-47) DG(J48):DC(I-48) DT(J49):DA(I-49) DG(J50):DC(I-50) DC(J51):DG(I-51) DA(J52):DT(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DT(J55):DA(I-55) DA(J56):DT(I-56) DT(J57):DA(I-57) DT(J58):DA(I-58) DA(J59):DT(I-59) DG(J60):DC(I-60) DC(J61):DG(I-61) DA(J62):DT(I-62) DT(J63):DA(I-63) DG(J64):DC(I-64) DT(J65):DA(I-65) DG(J66):DC(I-66) DT(J67):DA(I-67) DG(J68):DC(I-68) DC(J69):DG(I-69) DA(J70):DT(I-70) DT(J71):DA(I-71) chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >8g8e_X:lambda_repressor-like_DNA-binding_domains;Homeodomain-like; title=HUMAN OCT4 BOUND TO NUCLEOSOME WITH HUMAN LIN28B SEQUENCE organism=? DNA sequence DG(J-100):DC(I100) DT(J-99):DA(I99) DT(J-98):DA(I98) DA(J-97):DT(I97) DA(J-96):DT(I96) DG(J-95):DC(I95) DT(J-94):DA(I94) DG(J-93):DC(I93) DG(J-92):DC(I92) DT(J-91):DA(I91) DA(J-90):DT(I90) DT(J-89):DA(I89) DT(J-88):DA(I88) DA(J-87):DT(I87) DA(J-86):DT(I86) DC(J-85):DG(I85) DA(J-84):DT(I84) DT(J-83):DA(I83) DA(J-82):DT(I82) DT(J-81):DA(I81) DC(J-80):DG(I80) DC(J-79):DG(I79) DT(J-78):DA(I78) DC(J-77):DG(I77) DA(J-76):DT(I76) DG(J-75):DC(I75) DT(J-74):DA(I74) DG(J-73):DC(I73) DG(J-72):DC(I72) DT(J-71):DA(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) chainX ( 41) SER180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) GLN181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) THR182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) CYS185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG234 0 0 0 0 0 0 0 0 0 0 0 0 3 7 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) VAL276 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) CYS279 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) ASN280 0 0 0 0 0 0 0 0 0 0 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) GLN283 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG287 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kalqkeleqfakllkqkritlgytqadvgltlgvlfgkvfSQTtiCRfealqlsfknmcklrpllqkwveeadnnenlqeirkrkRtsienrvrgnlenlflqcpkptlqqishiaqqlglekdvvrVwfCNrrQkgkRs >8g8g_C:Histone-fold; title=HUMAN OCT4 BOUND TO NUCLEOSOME WITH HUMAN LIN28B SEQUENCE organism=? DNA sequence DG(I-73):DC(J73) DA(I-72):DT(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DT(I-69):DA(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DG(I-64):DC(J64) DT(I-63):DA(J63) DC(I-62):DG(J62) DT(I-61):DA(J61) DT(I-60):DA(J60) DT(I-59):DA(J59) DA(I-58):DT(J58) DT(I-57):DA(J57) DT(I-56):DA(J56) DC(I-55):DG(J55) DA(I-54):DT(J54) DC(I-53):DG(J53) DA(I-52):DT(J52) DA(I-51):DT(J51) DG(I-50):DC(J50) DC(I-49):DG(J49) DT(I-48):DA(J48) DT(I-47):DA(J47) DG(I-46):DC(J46) DC(I-45):DG(J45) DA(I-44):DT(J44) DC(I-43):DG(J43) DA(I-42):DT(J42) DA(I-41):DT(J41) DT(I-40):DA(J40) DC(I-39):DG(J39) DC(I-38):DG(J38) DC(I-37):DG(J37) DT(I-36):DA(J36) DG(I-35):DC(J35) DC(I-34):DG(J34) DT(I-33):DA(J33) DG(I-32):DC(J32) DG(I-31):DC(J31) DA(I-30):DT(J30) DC(I-29):DG(J29) DA(I-28):DT(J28) DA(I-27):DT(J27) DT(I-26):DA(J26) DT(I-25):DA(J25) DC(I-24):DG(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DA(I-21):DT(J21) DG(I-20):DC(J20) DT(I-19):DA(J19) DG(I-18):DC(J18) DA(I-17):DT(J17) DT(I-16):DA(J16) DG(I-15):DC(J15) DG(I-14):DC(J14) DC(I-13):DG(J13) DA(I-12):DT(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DT(I-9):DA(J9) DC(I-8):DG(J8) DC(I-7):DG(J7) DC(I-6):DG(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DC(I-3):DG(J3) DT(I-2):DA(J2) DT(I-1):DA(J1) DT(I0):DA(J0) DC(I1):DG(J-1) DC(I2):DG(J-2) DT(I3):DA(J-3) DT(I4):DA(J-4) DC(I5):DG(J-5) DT(I6):DA(J-6) DT(I7):DA(J-7) DT(I8):DA(J-8) DC(I9):DG(J-9) DT(I10):DA(J-10) DT(I11):DA(J-11) DC(I12):DG(J-12) DA(I13):DT(J-13) DC(I14):DG(J-14) DT(I15):DA(J-15) DT(I16):DA(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DA(I19):DT(J-19) DC(I20):DG(J-20) DT(I21):DA(J-21) DA(I22):DT(J-22) DC(I23):DG(J-23) DA(I24):DT(J-24) DT(I25):DA(J-25) DT(I26):DA(J-26) DT(I27):DA(J-27) DA(I28):DT(J-28) DT(I29):DA(J-29) DT(I30):DA(J-30) DC(I31):DG(J-31) DA(I32):DT(J-32) DG(I33):DC(J-33) DC(I34):DG(J-34) DA(I35):DT(J-35) DT(I36):DA(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DG(I39):DC(J-39) DT(I40):DA(J-40) DA(I41):DT(J-41) DT(I42):DA(J-42) DT(I43):DA(J-43) DG(I44):DC(J-44) DT(I45):DA(J-45) DT(I46):DA(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DA(I49):DT(J-49) DG(I50):DC(J-50) DT(I51):DA(J-51) DA(I52):DT(J-52) DA(I53):DT(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DT(I56):DA(J-56) DC(I57):DG(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DG(I61):DC(J-61) DT(I62):DA(J-62) DT(I63):DA(J-63) DA(I64):DT(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DA(I67):DT(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DA(I71):DT(J-71) DC(I72):DG(J-72) DC(I73):DG(J-73) DA(I74):DT(J-74) DC(I75):DG(J-75) DT(I76):DA(J-76) DG(I77):DC(J-77) DA(I78):DT(J-78) DG(I79):DC(J-79) DG(I80):DC(J-80) DA(I81):DT(J-81) DT(I82):DA(J-82) DA(I83):DT(J-83) DT(I84):DA(J-84) DG(I85):DC(J-85) DT(I86):DA(J-86) DT(I87):DA(J-87) DA(I88):DT(J-88) DA(I89):DT(J-89) DT(I90):DA(J-90) DA(I91):DT(J-91) DC(I92):DG(J-92) DC(I93):DG(J-93) DA(I94):DT(J-94) DC(I95):DG(J-95) DT(I96):DA(J-96) DT(I97):DA(J-97) DA(I98):DT(J-98) DA(I99):DT(J-99) DC(I100):DG(J-100) chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Rakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk >8g8z_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CRYO-EM STRUCTURE OF 3DVA COMPONENT 1 OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE PLUS PREQ1 LIGAND organism=? DNA sequence DC(A9):DG(B18) DG(A10):DC(B17) DT(A11):DT(B16) DC(A12):DC(B15) DG(A25):DC(B14) DA(A26):DT(B13) DA(A27):DT(B12) DG(A28):DC(B11) DA(A29):DT(B10) DG(A30):DC(B9) DA(A31):DT(B8) DT(A32):DA(B7) DT(A33):DA(B6) DC(A34):DG(B5) DA(A35):DT(B4) DG(A36):DC(B3) DA(A37):DT(B2) DG(A38):DC(B1) chainI (162) LYS163 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (540) GLU541 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgKthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrEragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled >8g8z_IJ: title=CRYO-EM STRUCTURE OF 3DVA COMPONENT 1 OF ESCHERICHIA COLI QUE-PEC (PAUSED ELONGATION COMPLEX) RNA POLYMERASE PLUS PREQ1 LIGAND organism=? DNA sequence DC(B1):DG(A38) DT(B2):DA(A37) DC(B3):DG(A36) DT(B4):DA(A35) DG(B5):DC(A34) DA(B6):DT(A33) DA(B7):DT(A32) DT(B8):DA(A31) DC(B9):DG(A30) DT(B10):DA(A29) DC(B11):DG(A28) DT(B12):DA(A27) DT(B13):DA(A26) DC(B14):DG(A25) DC(B15):DC(A12) DT(B16):DT(A11) DC(B17):DG(A10) DG(B18):DC(A9) chainI (162) LYS163 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (540) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 chainJ ( 27) GLU42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 ( 30) ASN45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 32) ARG47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgKthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrEragfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginieled/efdaikialaspdmirswsfgevkkpEtiNyRtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnrAptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmrssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqitgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8g9l_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA INITIATION SUBCOMPLEX OF XENOPUS LAEVIS DNA POLYMERASE ALPHA- PRIMASE organism=? DNA sequence DT(C24) DC(C25) DA(C26) DC(C27) DG(C28) DC(C29) DA(C30) DG(C31) DT(C32) DA(C33) DT(C34) DC(C35) DC(C36) DT(C37) DG(C38) DT(C39) chainA (338) ARG676 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG784 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (573) LEU947 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (577) SER951 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (579) TYR953 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (584) PHE958 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (586) TYR960 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 (675) LYS1049 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (703) ARG1077 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence qvfrfywldayedqysqpgvvylfgkvwiesadayvsccvsvkniertvyllprenrvqlstgkdtgapvsmmhvyqefneavaekykimkfkskkvdkdyafeipdvpasseylevrysadspqlpqdlkgetfshvfgtntsslelfllsrkikgpswleikspqlssqpmswckveavvtrpdqvsvvkdlapppvvvlslsmktvqnakthqneivaiaalvhhtfpldkappqppfqthfcvlsklndcifpydyneavkqknanieialtertllgfflakihkidpdvivghdiygfdlevllqrinsckvpfwskigrlrrsvmpklggRsgfaernaacgriicdieisakelircksyhlselvhqilkaervvippenirnayndsvhllymlentwidakfilqimcelnvlplalqitniagnvmsrtlmggRserneylllhaftennfivpdkpvaayagglvlepkvgfydkfillldfnslypsiiqeynicfttvhreadeipelphsdlemgilpreirklverrrhvkqlmkqpdlnpdlylqydirqkalkLtanSmYgclgFsYsrfyakplaalvthqgreillhtkemvqkmnleviygdtdsimintncnnleevfklgnrvkseinksyklleididgifksllllkkKkyaaltveptgdgkyvtkqelkgldivRrdwcelakqagnyvisqilsdqprdsiveniqkklteigenvtngtvpitqyeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtisyvicqdgsnlsasqrayaqeqlqkqenlsidtqyylsqqvhpvvaricepidgidsaliamwlgldpsqf >8g9l_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=DNA INITIATION SUBCOMPLEX OF XENOPUS LAEVIS DNA POLYMERASE ALPHA- PRIMASE organism=? DNA sequence DT(C24) DC(C25) DA(C26) DC(C27) DG(C28) DC(C29) DA(C30) DG(C31) DT(C32) DA(C33) DT(C34) DC(C35) DC(C36) DT(C37) DG(C38) DT(C39) chainA (338) ARG676 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG784 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (573) LEU947 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (577) SER951 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 (579) TYR953 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (584) PHE958 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (586) TYR960 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 (675) LYS1049 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (703) ARG1077 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 chainB ( 33) HIS309 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 ( 37) MET313 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 77) TYR353 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 ( 78) SER354 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 81) HIS357 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 ( 90) THR366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 93) THR369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 prot.sequence qvfrfywldayedqysqpgvvylfgkvwiesadayvsccvsvkniertvyllprenrvqlstgkdtgapvsmmhvyqefneavaekykimkfkskkvdkdyafeipdvpasseylevrysadspqlpqdlkgetfshvfgtntsslelfllsrkikgpswleikspqlssqpmswckveavvtrpdqvsvvkdlapppvvvlslsmktvqnakthqneivaiaalvhhtfpldkappqppfqthfcvlsklndcifpydyneavkqknanieialtertllgfflakihkidpdvivghdiygfdlevllqrinsckvpfwskigrlrrsvmpklggRsgfaernaacgriicdieisakelircksyhlselvhqilkaervvippenirnayndsvhllymlentwidakfilqimcelnvlplalqitniagnvmsrtlmggRserneylllhaftennfivpdkpvaayagglvlepkvgfydkfillldfnslypsiiqeynicfttvhreadeipelphsdlemgilpreirklverrrhvkqlmkqpdlnpdlylqydirqkalkLtanSmYgclgFsYsrfyakplaalvthqgreillhtkemvqkmnleviygdtdsimintncnnleevfklgnrvkseinksyklleididgifksllllkkKkyaaltveptgdgkyvtkqelkgldivRrdwcelakqagnyvisqilsdqprdsiveniqkklteigenvtngtvpitqyeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtisyvicqdgsnlsasqrayaqeqlqkqenlsidtqyylsqqvhpvvaricepidgidsaliamwlgldpsqf/isleqidgfaaksfplcmrqlhkslrenhhlrHggrMqyglflkgigltleqalqfwrleftkgkvdsekfdkvyaYSirHnygkegkrTdyTpyscmkvilsnppsqgdyhgcpfrhsdpellkqklqsfkvpssginqilelvkgmhyqlacqkyfelthsvddcgfslnhpnqyfaesqkllt >8g9l_B: title=DNA INITIATION SUBCOMPLEX OF XENOPUS LAEVIS DNA POLYMERASE ALPHA- PRIMASE organism=? DNA sequence DT(C24) DC(C25) DA(C26) DC(C27) DG(C28) DC(C29) DA(C30) DG(C31) DT(C32) DA(C33) DT(C34) DC(C35) DC(C36) DT(C37) DG(C38) DT(C39) chainB ( 33) HIS309 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 ( 37) MET313 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 77) TYR353 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 ( 78) SER354 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 81) HIS357 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 ( 90) THR366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 93) THR369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 prot.sequence isleqidgfaaksfplcmrqlhkslrenhhlrHggrMqyglflkgigltleqalqfwrleftkgkvdsekfdkvyaYSirHnygkegkrTdyTpyscmkvilsnppsqgdyhgcpfrhsdpellkqklqsfkvpssginqilelvkgmhyqlacqkyfelthsvddcgfslnhpnqyfaesqkllt >8g9n_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PARTIAL DNA ELONGATION SUBCOMPLEX OF XENOPUS LAEVIS DNA POLYMERASE ALPHA-PRIMASE organism=? DNA sequence DC(C18):DG(D19) DT(C19):DA(D18) DA(C20):DT(D17) DA(C21):DT(D16) DG(C22):DC(D15) DT(C23):DA(D14) DT(C24):DA(D13) DC(C25):DG(D12) chainA (675) LYS1049 5 3 0 0 0 0 0 0 (703) ARG1077 0 0 3 3 0 0 0 0 prot.sequence qvfrfywldayedqysqpgvvylfgkvwiesadayvsccvsvkniertvyllprenrvqlstgkdtgapvsmmhvyqefneavaekykimkfkskkvdkdyafeipdvpasseylevrysadspqlpqdlkgetfshvfgtntsslelfllsrkikgpswleikspqlssqpmswckveavvtrpdqvsvvkdlapppvvvlslsmktvqnakthqneivaiaalvhhtfpldkappqppfqthfcvlsklndcifpydyneavkqknanieialtertllgfflakihkidpdvivghdiygfdlevllqrinsckvpfwskigrlrrsvmpklggrsgfaernaacgriicdieisakelircksyhlselvhqilkaervvippenirnayndsvhllymlentwidakfilqimcelnvlplalqitniagnvmsrtlmggrserneylllhaftennfivpdkpvaayagglvlepkvgfydkfillldfnslypsiiqeynicfttvhreadeipelphsdlemgilpreirklverrrhvkqlmkqpdlnpdlylqydirqkalkltansmygclgfsysrfyakplaalvthqgreillhtkemvqkmnleviygdtdsimintncnnleevfklgnrvkseinksyklleididgifksllllkkKkyaaltveptgdgkyvtkqelkgldivRrdwcelakqagnyvisqilsdqprdsiveniqkklteigenvtngtvpitqyeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtisyvicqdgsnlsasqrayaqeqlqkqenlsidtqyylsqqvhpvvaricepidgidsaliamwlgldpsqf >8g9o_AB:DNA/RNA_polymerases;Ribonuclease_H-like; title=COMPLETE DNA ELONGATION SUBCOMPLEX OF XENOPUS LAEVIS DNA POLYMERASE ALPHA-PRIMASE organism=? DNA sequence DT(C13) DG(C14) DT(C15) DC(C16) DG(C17) DC(C18) DT(C19) DA(C20) DA(C21) DG(C22) DT(C23) DT(C24) DC(C25) DA(C26) DC(C27) DG(C28) DC(C29) DA(C30) DG(C31) DT(C32) DA(C33) DT(C34) DC(C35) DC(C36) DT(C37) DG(C38) DT(C39) chainA (338) ARG676 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) SER677 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG784 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (573) LEU947 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (577) SER951 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (584) PHE958 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (586) TYR960 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (675) LYS1049 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (703) ARG1077 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 37) MET313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 ( 77) TYR353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 ( 81) HIS357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 ( 82) ASN358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 90) THR366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 ( 92) TYR368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 ( 93) THR369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 prot.sequence qvfrfywldayedqysqpgvvylfgkvwiesadayvsccvsvkniertvyllprenrvqlstgkdtgapvsmmhvyqefneavaekykimkfkskkvdkdyafeipdvpasseylevrysadspqlpqdlkgetfshvfgtntsslelfllsrkikgpswleikspqlssqpmswckveavvtrpdqvsvvkdlapppvvvlslsmktvqnakthqneivaiaalvhhtfpldkappqppfqthfcvlsklndcifpydyneavkqknanieialtertllgfflakihkidpdvivghdiygfdlevllqrinsckvpfwskigrlrrsvmpklggRSgfaernaacgriicdieisakelircksyhlselvhqilkaervvippenirnayndsvhllymlentwidakfilqimcelnvlplalqitniagnvmsrtlmggRserneylllhaftennfivpdkpvaayagglvlepkvgfydkfillldfnslypsiiqeynicfttvhreadeipelphsdlemgilpreirklverrrhvkqlmkqpdlnpdlylqydirqkalkLtanSmygclgFsYsrfyakplaalvthqgreillhtkemvqkmnleviygdtdsimintncnnleevfklgnrvkseinksyklleididgifksllllkkKkyaaltveptgdgkyvtkqelkgldivRrdwcelakqagnyvisqilsdqprdsiveniqkklteigenvtngtvpitqyeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtisyvicqdgsnlsasqrayaqeqlqkqenlsidtqyylsqqvhpvvaricepidgidsaliamwlgldpsqf/isleqidgfaaksfplcmrqlhkslrenhhlrhggrMqyglflkgigltleqalqfwrleftkgkvdsekfdkvyaYsirHNygkegkrTdYTpyscmkvilsnppsqgdyhgcpfrhsdpellkqklqsfkvpssginqilelvkgmhyqlacqkyfelthsvddcgfslnhpnqyfaesqkllt >8g9o_B: title=COMPLETE DNA ELONGATION SUBCOMPLEX OF XENOPUS LAEVIS DNA POLYMERASE ALPHA-PRIMASE organism=? DNA sequence DT(C13) DG(C14) DT(C15) DC(C16) DG(C17) DC(C18) DT(C19) DA(C20) DA(C21) DG(C22) DT(C23) DT(C24) DC(C25) DA(C26) DC(C27) DG(C28) DC(C29) DA(C30) DG(C31) DT(C32) DA(C33) DT(C34) DC(C35) DC(C36) DT(C37) DG(C38) DT(C39) chainB ( 37) MET313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 ( 77) TYR353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 ( 81) HIS357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 ( 82) ASN358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 90) THR366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 ( 92) TYR368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 0 ( 93) THR369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 prot.sequence isleqidgfaaksfplcmrqlhkslrenhhlrhggrMqyglflkgigltleqalqfwrleftkgkvdsekfdkvyaYsirHNygkegkrTdYTpyscmkvilsnppsqgdyhgcpfrhsdpellkqklqsfkvpssginqilelvkgmhyqlacqkyfelthsvddcgfslnhpnqyfaesqkllt >8gao_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=BACTERIOPHAGE T4 STALLED PRIMOSOME WITH MUTANT GP41-E227Q organism=? DNA sequence DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) DT(M17) chainA (322) ARG322 0 2 0 0 0 0 0 0 0 0 0 0 chainB (327) ASN327 0 0 0 0 0 0 0 1 1 0 0 0 chainC (327) ASN327 0 0 0 0 0 1 3 0 0 0 0 0 chainD (327) ASN327 0 0 0 0 6 0 0 0 0 0 0 0 (328) SER328 0 0 0 0 0 1 0 0 0 0 0 0 chainE (327) ASN327 0 0 5 0 0 0 0 0 0 0 0 0 chainF (327) ASN327 11 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscriRvysensyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNSyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie/mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie >8gao_E:P-loop_containing_nucleoside_triphosphate_hydrolases; title=BACTERIOPHAGE T4 STALLED PRIMOSOME WITH MUTANT GP41-E227Q organism=? DNA sequence DT(M6) DT(M7) DT(M8) DT(M9) DT(M10) DT(M11) DT(M12) DT(M13) DT(M14) DT(M15) DT(M16) DT(M17) chainE (327) ASN327 0 0 5 0 0 0 0 0 0 0 0 0 prot.sequence mveiilshlifdqayfskvwpymdseyfesgpakntfklikshvneyhsvpsinalnvalenssfteteysgvktliskladspedhswlvketekyvqqramfnatskiieiqtnaelppekrnkkmpdvgaipdimrqalsisfdsyvghdwmddyearwlsymnkarkvpfklrilnkitkggaetgtlnvlmagvnvgkslglcslaadylqlghnvlyismqmaeevcakridanmldvslddiddghisyaeykgkmekwrekstlgrlivkqyptggadantfrsllnelklkknfvptiiivdylgickscrirvyseNsyttvkaiaeelralavetetvlwtaaqvgkqawdssdvnmsdiaesaglpatadfmlavieteelaaaeqqlikqiksrygdknkwnkflmgvqkgnqkwveie >8gap_A: title=STRUCTURE OF LARP7 PROTEIN P65-TELOMERASE RNA COMPLEX IN TELOMERASE organism=? DNA sequence DG(C47) DG(C48) DG(C49) DT(C50) DT(C51) DG(C52) DG(C53) DG(C54) DG(C55) DT(C56) DT(C57) DG(C58) DG(C59) DG(C60) chainA (339) PHE414 0 0 0 0 0 0 0 0 0 10 0 0 0 0 (484) LEU559 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (488) GLN563 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (828) ASN926 0 0 0 0 0 0 0 0 0 0 3 0 0 0 prot.sequence kqmltrkedlltvlkqisalkyvsnlyefllatekivqtseldtqfqefltttiiaseqnlvenykqkynqpnfsqltikqviddsiillgnkqnyvqqigtttigfyveyeninlsrqtlyssnfrnllnifgeedfkyflidflvftkveqngylqvagvclnqyfsenqyiypeiqrsqifycnhmgrepgvfkssffnysepqtiikktllkeyqsknfscqeerdlfleftekivqnfhninfnyllkkfcklpenyqslksqvkqivqsenkanqqscenlfnslydteisykqitnflrqiiqncvpnqllgkknfkvfleklyefvqmkrFenqkvldyicfmdvfdvewfvdlknqkftqkrkyisdkrkilgdlivfiinkivipvlrynfyitekhkegsqifyyrkpiwklvskltivkleeenlekveeklipedsfqkypqgklriipkkgsfrpimtflrkdkqknikLnlnQilmdsqlvfrnlkdmlgqkigysvfdnkqisekfaqfiekwknkgrpqlyyvtldikkcydsidqmkllnffnqsdliqdtyfinkyllfqrnkrpllqimdninfpyyfnlkerqiayslyddddqilqkgfkeiqsddrpfivinqdkprcitkdiihnhlkhisqynvisfnkvkfrqkrgipqglnisgvlcsfyfgkleeeytqflknaeqvngsinllmrltddylfisdsqqnalnlivqlqncannngfmfndqkittnfqfpqedynlehfkisvqnecqwigksidmntleiksiqkqtqqeinqtinvaisiknlksqlknklrslflNqlidyfnpninsfeglcrqlyhhskatvmkfypfmtklfqidlkkskqysvqygkentnenflkdilyytvedvckilcylqfedeinsnikeifknlyswimwdiivsylkkkkqfkgylnkllqkirksrffylkegckslqlilsqqkyqlnkkeleaiefidlnnliqdiktlipkisak >8gap_AD:Nucleic_acid-binding_proteins; title=STRUCTURE OF LARP7 PROTEIN P65-TELOMERASE RNA COMPLEX IN TELOMERASE organism=? DNA sequence DG(C47) DG(C48) DG(C49) DT(C50) DT(C51) DG(C52) DG(C53) DG(C54) DG(C55) DT(C56) DT(C57) DG(C58) DG(C59) DG(C60) chainA (339) PHE414 0 0 0 0 0 0 0 0 0 10 0 0 0 0 (484) LEU559 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (488) GLN563 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (828) ASN926 0 0 0 0 0 0 0 0 0 0 3 0 0 0 chainD ( 93) PHE603 49 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS660 0 4 8 0 0 0 0 0 0 0 0 0 0 0 (152) PHE662 0 0 48 0 0 0 0 0 0 0 0 0 0 0 (157) GLU667 0 1 8 0 0 0 0 0 0 0 0 0 0 0 (159) ALA669 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (161) LYS671 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LEU673 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kqmltrkedlltvlkqisalkyvsnlyefllatekivqtseldtqfqefltttiiaseqnlvenykqkynqpnfsqltikqviddsiillgnkqnyvqqigtttigfyveyeninlsrqtlyssnfrnllnifgeedfkyflidflvftkveqngylqvagvclnqyfsenqyiypeiqrsqifycnhmgrepgvfkssffnysepqtiikktllkeyqsknfscqeerdlfleftekivqnfhninfnyllkkfcklpenyqslksqvkqivqsenkanqqscenlfnslydteisykqitnflrqiiqncvpnqllgkknfkvfleklyefvqmkrFenqkvldyicfmdvfdvewfvdlknqkftqkrkyisdkrkilgdlivfiinkivipvlrynfyitekhkegsqifyyrkpiwklvskltivkleeenlekveeklipedsfqkypqgklriipkkgsfrpimtflrkdkqknikLnlnQilmdsqlvfrnlkdmlgqkigysvfdnkqisekfaqfiekwknkgrpqlyyvtldikkcydsidqmkllnffnqsdliqdtyfinkyllfqrnkrpllqimdninfpyyfnlkerqiayslyddddqilqkgfkeiqsddrpfivinqdkprcitkdiihnhlkhisqynvisfnkvkfrqkrgipqglnisgvlcsfyfgkleeeytqflknaeqvngsinllmrltddylfisdsqqnalnlivqlqncannngfmfndqkittnfqfpqedynlehfkisvqnecqwigksidmntleiksiqkqtqqeinqtinvaisiknlksqlknklrslflNqlidyfnpninsfeglcrqlyhhskatvmkfypfmtklfqidlkkskqysvqygkentnenflkdilyytvedvckilcylqfedeinsnikeifknlyswimwdiivsylkkkkqfkgylnkllqkirksrffylkegckslqlilsqqkyqlnkkeleaiefidlnnliqdiktlipkisak/qriyssieeiiqqaqaseigqkkefyvygnlvsiqmknklyyyrctcqgksvlkyhgdsffcescqqfinpqvhlmlrafvqdstgtipvmiFdqqssqlinqidpsihvqeagqyvknciengqeeiirqlfskldfarfifeiqfenKeFnneqEiAyKvLkiekenikeeskyllkklehlinn >8gcc_A:Type_II_DNA_topoisomerase; title=T. CRUZI TOPOISOMERASE II ALPHA BOUND TO DSDNA AND THE COVALENT INHIBITOR CT1 organism=? DNA sequence DG(D2):DC(C25) DA(D3):DT(C24) DT(D4):DA(C23) DA(D5):DT(C22) DA(D6):DT(C21) DC(D7):DG(C20) DA(D8):DT(C19) DA(D9):DT(C18) DT(D10):DA(C17) DG(D11):DC(C16) DA(D12):DT(C15) DG(D13):DC(C14) DC(D14):DG(C13) DT(D15):DA(C12) DC(D16):DG(C11) DA(D17):DT(C10) DT(D18):DA(C9) DT(D19):DA(C8) DG(D20):DC(C7) DT(D21):DA(C6) DT(D22):DA(C5) DA(D23):DT(C4) DT(D24):DA(C3) DC(D25):DG(C2) chainA ( 52) ARG460 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS462 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) ARG683 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) ILE826 0 0 0 0 0 24 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA831 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence lgipklddaneaggkyshrctliltegdsakalctaglavkdrdyfgvfplRgKplnvrdatlkkvmacaefqavskimgldirqkysgverlryghlmimsdqdhdgshikgliinmihhywpdliktpgflqqfitpivkarisffsmpdyfewknaigdgirnyeiryykglgtsgakegreyfenidrhrldfvhedatddarivmafakdkveerkhwitqfkantnvnesmnynvrtvrysefvdkelilfsvadceRsipsvidglkpgqrkiifssfkrrltrsikvvqlagyvsehaayhhgeqslvqtivglaqnfvgsnnvpllqqdgqfgtrlqggkdhaagryiftrltniaryiyhpsddfvvdykdddglsvepfyyvpvipmvlvngtsgIgtgfAtnipnysplevidnlmrllrgeevqpmkpwyfgfagtieekekgkfvstgcanvrpdgvvqitelpigtwtqgykkfleelrekevvvqyrehntdvtvdfevflhpevlhhwvaqgcveerlqlreyihatniiafdregqitkyrdaeavlkefylvrleyyakrrdfligdlrsvasklenmvrfvtevvdgrlivtrrrkkelleelrqrgyapfpemrraardydyllgmrlwnltaemiarlqsqlqkardelaalekrtpkdlwaedlnqlrprienlfeerakeias >8gcc_AB:Type_II_DNA_topoisomerase; title=T. CRUZI TOPOISOMERASE II ALPHA BOUND TO DSDNA AND THE COVALENT INHIBITOR CT1 organism=? DNA sequence DG(D2):DC(C25) DA(D3):DT(C24) DT(D4):DA(C23) DA(D5):DT(C22) DA(D6):DT(C21) DC(D7):DG(C20) DA(D8):DT(C19) DA(D9):DT(C18) DT(D10):DA(C17) DG(D11):DC(C16) DA(D12):DT(C15) DG(D13):DC(C14) DC(D14):DG(C13) DT(D15):DA(C12) DC(D16):DG(C11) DA(D17):DT(C10) DT(D18):DA(C9) DT(D19):DA(C8) DG(D20):DC(C7) DT(D21):DA(C6) DT(D22):DA(C5) DA(D23):DT(C4) DT(D24):DA(C3) DC(D25):DG(C2) chainA ( 52) ARG460 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LYS462 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (264) ARG683 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (407) ILE826 0 0 0 0 0 24 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) ALA831 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 52) ARG460 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 ( 54) LYS462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 (264) ARG683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (407) ILE826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 22 0 0 0 0 0 prot.sequence lgipklddaneaggkyshrctliltegdsakalctaglavkdrdyfgvfplRgKplnvrdatlkkvmacaefqavskimgldirqkysgverlryghlmimsdqdhdgshikgliinmihhywpdliktpgflqqfitpivkarisffsmpdyfewknaigdgirnyeiryykglgtsgakegreyfenidrhrldfvhedatddarivmafakdkveerkhwitqfkantnvnesmnynvrtvrysefvdkelilfsvadceRsipsvidglkpgqrkiifssfkrrltrsikvvqlagyvsehaayhhgeqslvqtivglaqnfvgsnnvpllqqdgqfgtrlqggkdhaagryiftrltniaryiyhpsddfvvdykdddglsvepfyyvpvipmvlvngtsgIgtgfAtnipnysplevidnlmrllrgeevqpmkpwyfgfagtieekekgkfvstgcanvrpdgvvqitelpigtwtqgykkfleelrekevvvqyrehntdvtvdfevflhpevlhhwvaqgcveerlqlreyihatniiafdregqitkyrdaeavlkefylvrleyyakrrdfligdlrsvasklenmvrfvtevvdgrlivtrrrkkelleelrqrgyapfpemrraardydyllgmrlwnltaemiarlqsqlqkardelaalekrtpkdlwaedlnqlrprienlfeerakeias/lgipklddaneaggkyshrctliltegdsakalctaglavkdrdyfgvfplRgKplnvrdatlkkvmacaefqavskimgldirqkysgverlryghlmimsdqdhdgshikgliinmihhywpdliktpgflqqfitpivkarisffsmpdyfewknaigdgirnyeiryykglgtsgakegreyfenidrhrldfvhedatddarivmafakdkveerkhwitqfkantnvnesmnynvrtvrysefvdkelilfsvadceRsipsvidglkpgqrkiifssfkrrltrsikvvqlagyvsehaayhhgeqslvqtivglaqnfvgsnnvpllqqdgqfgtrlqggkdhaagryiftrltniaryiyhpsddfvvdykdddglsvepfyyvpvipmvlvngtsgIgtgfatnipnysplevidnlmrllrgeevqpmkpwyfgfagtieekekgkfvstgcanvrpdgvvqitelpigtwtqgykkfleelrekevvvqyrehntdvtvdfevflhpevlhhwvaqgcveerlqlreyihatniiafdregqitkyrdaeavlkefylvrleyyakrrdfligdlrsvasklenmvrfvtevvdgrlivtrrrkkelleelrqrgyapfpemrraardydyllgmrlwnltaemiarlqsqlqkardelaalekrtpkdlwaedlnqlrprienlfeerakeias >8gh6_A:DNA/RNA_polymerases; title=BOMBYX MORI R2 RETROTRANSPOSON INITIATING TARGET-PRIMED REVERSE TRANSCRIPTION organism=? DNA sequence DC(T1):DG(B70) DT(T2):DA(B69) DG(T3):DC(B68) DT(T4):DA(B67) DG(T5):DC(B66) DA(T6):DT(B65) DA(T7):DT(B64) DG(T8):DC(B63) DC(T9):DG(B62) DG(T10):DC(B61) DC(T11):DG(B60) DG(T12):DC(B59) DG(T13):DC(B58) DG(T14):DC(B57) DT(T15):DA(B56) DA(T16):DT(B55) DA(T17):DT(B54) DA(T18):DT(B53) DC(T19):DG(B52) DG(T20):DC(B51) DG(T21):DC(B50) DC(T22):DG(B49) DG(T23):DC(B48) DG(T24):DC(B47) DG(T25):DC(B46) DA(T26):DT(B45) DG(T27):DC(B44) DT(T28):DA(B43) DA(T29):DT(B42) DA(T30):DT(B41) DC(T31):DG(B40) DT(T32):DA(B39) DA(T33):DT(B38) DT(T34):DA(B37) DG(T35):DC(B36) DA(T36):DT(B35) DC(T37):DG(B34) DT(T38):DA(B33) DC(T39):DG(B32) DT(T40):DA(B31) DC(T41):DG(B30) chainA ( 15) ARG125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) VAL129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLU191 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) LYS194 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG198 0 0 0 0 0 0 0 0 0 0 0 0 0 12 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (464) HIS673 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 13 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (466) LYS675 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (555) ARG764 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (574) ASP783 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (713) ARG922 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 (715) ARG924 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 prot.sequence gwtcqfcertfstnRglgVhkrrahpvetntdaapmmvKrRwhgeeidllartearllaergqcsggdlfgalpgfgrtlEaiKgqrRrepyralvqahlarfgstsrqkrraeyarvqelykkcrsraaaevidgacggvghsleemetywrpilervsdapgptpealhalgrtqlwkpisveeikasrfdwrtspgpdgirsgqwravpvhlkaemfnawmargeipeilrqcrtvfvpkverpggpgeyrpisiasiplrhfhsilarrllaccppdarqrgficadgtlensavldavlgdsrkklrechvavldfakafdtvshealvellrlrgmpeqfcgyiahlydtasttlavnnemsspvkvgrgvrqgdplspilfnvvmdlilaslpervgyrlemelvsalayaddlvllagskvgmqesisavdcvgrqmglrlncrksavlsmipdgHrKkhhyltertfniggkplrqvscverwrylgvdfeasgcvtlehsissalnnisraplkpqqrleilrahliprfqhgfvlgnisddrlRmldvqirkavgqwlrlpaDvpkayyhaavqdgglaipsvratipdlivrrfggldsspwsvaraaaksdkirkklrwawkqlrrfsrvdsttqrpsvrlfwrehlhasvdgrelrestrtptstkwirercaqitgrdfvqfvhthinalpsrirgsRgRrgggessltcragckvrettahilqqchrthggrilrhnkivsfvakameenkwtveleprlrtsvglrkpdiiasrdgvgvivdvqvvsgqrsldelhrekrnkygnhgelvelvagrlglpkaecvratsctiswrgvwsltsykelrsiiglreptlqivpilalrgshmnwtrfnqmts >8gh8_C:RuvA_domain_2-like;Nucleic_acid-binding_proteins; title=RUVA HOLLIDAY JUNCTION DNA COMPLEX organism=? DNA sequence DA(G2):DT(H35) DT(G3):DA(H34) DA(G4):DT(H33) DA(G5):DT(H32) DC(G6):DG(H31) DT(G7):DA(H30) DT(G8):DA(H29) DC(G9):DG(H28) DG(G10):DC(H27) DT(G11):DA(H26) DA(G12):DT(H25) DT(G13):DA(H24) DA(G14):DT(H23) DG(G15):DC(H22) DC(G16):DG(H21) DA(G17):DT(H20) DT(G18):DA(H19) DA(G19):DT(H18) DC(G20):DG(H17) DA(G21):DT(H16) DT(G22):DA(H15) DT(G23):DA(H14) DA(G24):DT(H13) DT(G25):DA(H12) DA(G26):DT(H11) DC(G27):DG(H10) DG(G28):DC(H9) DA(G29):DT(H8) DA(G30):DT(H7) DC(G31):DG(H6) DT(G32):DA(H5) DT(G33):DA(H4) DA(G34):DT(H3) DT(G35):DA(H2) chainC ( 83) LYS83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) VAL84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) LEU88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mirylrglvlkkeaggfvllaggvgfflqaptpflqaleegkevgvhthlllkeeglslygfpdeenlalfelllsvsgvgpKValaLlsalpprllarallegdarlltsasgvgrrlaerialelkgkvpphllagek >8gkh_P: title=STRUCTURE OF THE SPIZELLOMYCES PUNCTATUS FANZOR (SPUFZ) IN COMPLEX WITH OMEGA RNA AND TARGET DNA organism=? DNA sequence DT(T1):DA(N-1) DA(T2):DT(N-2) DT(T3):DA(N-3) DG(T4):DC(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DC(T7):DG(N-7) DG(T8):DC(N-8) DG(T9):DC(N-9) DG(T10):DC(N-10) DT(T11):DA(N-11) DA(T12):DT(N-12) DC(T13):DG(N-13) DC(T14):DG(N-14) DG(T15):DC(N-15) chainP ( 79) ARG96 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 ( 83) LYS100 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (112) GLN129 0 3 9 4 0 0 0 0 0 0 0 0 0 0 0 (113) GLN130 15 9 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ASN133 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) TYR134 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (261) ASP278 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (263) ILE280 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 (274) ARG291 0 0 7 13 2 0 0 0 0 0 0 0 0 0 0 (328) TYR345 59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ptlhtcnktsfakaflpnetyrqrlldyiaiihqladhashalkfyilststssfpvvhedtieailyllnkgeawhpRkeaKkawrdcllpyvqrycqivgfihpnlrgeQQsiNYltvsmmtnlkvnvqehfmqmllryinlrfdvkgqkqrlppksdarkafftrlrylksvflfdvvpeleflddltplesevleeiwsldlpflpndplayaivadpmsffpaycklsglyeqygfqrfsaiplrrsliqshvriDtIilyqhilcitRrdaetvekddlwmrvcnlctkafrsrcgmhfegsittdgasvsvylkhpeadkYkalyvennlpacraaenvvvidpnkrdilycqdsngttfrytanqravetgsrrfakrreamkeeagvdliesripshktmnlmdftryllvrradwdrrkefyshpahtrwkwhsfinrqksesdlisnmrnkygenftvvmgdwsdagrtarfqtssktkgwrtlfkrnridcflldeyktssvcprcsssefvekkfktrphsrpwrrregkiekvhgllgctnpnclqqawtsgmrywnrdmlstcnmllivrsmldghgrpevfsrs >8gkr_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INCORPORATING 5F-DUTP ACROSS DA organism=Homo sapiens DNA sequence DC(T5):DG(P8) DT(T6):DA(P7) DC(T7):DG(P6) DA(T8):DT(P5) DC(T9):DG(P4) DA(T10):DT(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (314) SER322 0 1 0 0 0 0 0 0 (370) LEU378 0 1 0 1 0 0 0 0 (374) ARG382 0 0 0 0 0 5 6 0 prot.sequence atgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqtvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >8gme_BD:P-loop_containing_nucleoside_triphosphate_hydrolases;Nucleic_acid-binding_proteins; title=CRYSTAL STRUCTURE OF THE GP32-DDA-DT17 COMPLEX organism=? DNA sequence DT(Q599) DT(Q600) DT(Q601) DT(Q602) DT(Q603) DT(Q604) DT(Q605) DT(Q606) DT(Q607) chainB chainD ( 88) ASP121 0 0 0 0 0 16 9 0 0 ( 90) LYS123 0 0 0 0 0 0 3 0 0 ( 91) LEU124 0 0 0 0 0 3 14 0 0 (115) ARG148 0 0 1 0 0 0 0 0 0 (117) VAL150 0 0 0 2 4 2 0 0 0 (119) PRO152 0 0 0 1 3 0 0 0 0 (122) ASN155 0 0 3 0 0 0 0 0 0 (207) PHE240 0 0 6 0 0 0 0 0 0 (243) PHE276 0 0 0 0 0 0 0 2 0 (363) HIS396 0 0 0 1 0 0 0 0 0 (382) TYR415 4 0 0 0 0 0 0 0 0 (383) ALA416 0 0 3 0 0 0 0 0 0 (384) ASP417 0 0 6 0 0 0 0 0 0 (387) LEU420 0 0 3 3 0 0 0 0 0 prot.sequence ssedkgewklkldnagngqavirflpskndeqapfailvnhgfkkngkwyietcssthgdydscpvcqyiskndlyntdnkeyslvkrktsywanilvvkdpaapenegkvfkyrfgkkiwdkinamiavtpvdvtcpweganfvlkvkqvsgfsnydeskflnqsaipniddesfqkelfeqmvdlsemtskdkfksfeelntkfgqvmgaaataakkadkvaddldafnvddf/tegqknafnivmkaikekkhhvtingpagtgattltkfiiealistgetgiilaapthaakkilsklsgkeasticrvlicdevsmyDrKLfkillstippwctiigigdnkqiRpVdPgeNtayispffthkdfyqceltevkrsnapiidvatdvrngkwiydkvvdghgvrgftgdtalrdfmvnyfsivkslddlfenrvmaFtnksvdklnsiirkkifetdkdfivgeiivmqeplFktykidgkpvseiifnngqlvriieaeytstfvkargvpgeylirhwdltvetygddeyyrekikiissdeelykfnlflgktaetyknwnkggkapwsdfwdaksqfskvkalpastfHkaqgmsvdrafiytpcihYADveLaqqllyvgvtrgrydvfyv >8gml_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INCORPORATING 5F-DUTP ACROSS DG organism=Homo sapiens DNA sequence DC(T5):DG(P8) DT(T6):DA(P7) DC(T7):DG(P6) DA(T8):DT(P5) DC(T9):DG(P4) DA(T10):DT(P3) DC(T11):DG(P2) DT(T12):DA(P1) chainA (317) SER322 0 1 0 0 0 0 0 0 (373) LEU378 0 2 1 0 0 0 0 0 (377) ARG382 0 0 0 0 0 5 7 0 prot.sequence matgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >8gn3_A:beta-beta-alpha_zinc_fingers; title=THE CRYSTAL STRUCTURE OF ZBTB10 ZF1-2 IN COMPLEX WITH TELOMERIC VAIRANT REPEAT TTGGGG organism=Homo sapiens DNA sequence DT(D2):DA(C11) DA(D3):DT(C10) DC(D4):DG(C9) DA(D5):DT(C8) DA(D6):DT(C7) DC(D7):DG(C6) DC(D8):DG(C5) DC(D9):DG(C4) DC(D10):DG(C3) DA(D11):DT(C2) chainA ( 18) TYR733 0 0 0 4 3 0 0 0 0 0 ( 20) ARG735 0 0 3 1 0 0 0 0 0 0 ( 21) THR736 0 0 0 2 3 0 0 0 0 0 ( 24) ARG739 0 0 0 0 8 12 3 0 0 0 ( 46) ARG761 0 0 0 0 0 1 12 20 0 0 ( 48) GLU763 0 0 0 0 2 10 4 1 0 0 ( 49) HIS764 0 0 0 0 0 0 0 8 5 0 ( 52) ARG767 0 0 0 0 0 0 0 3 11 19 prot.sequence slimnklkcphcsyvakyrrTlkRhllihtgvrsfscdicgklftRrEHvkRhslvh >8gn4_A:beta-beta-alpha_zinc_fingers; title=THE CRYSTAL STRUCTURE OF ZBTB10 ZF1-2 R767Q IN COMPLEX WITH TELOMERIC DNA TTAGGG organism=Homo sapiens DNA sequence DT(C2):DA(B11) DA(C3):DT(B10) DT(C4):DA(B9) DA(C5):DT(B8) DA(C6):DT(B7) DC(C7):DG(B6) DC(C8):DG(B5) DC(C9):DG(B4) DT(C10):DA(B3) DA(C11):DT(B2) chainA ( 14) TYR733 0 0 0 2 0 0 0 0 0 0 ( 16) ARG735 2 3 13 6 0 0 0 0 0 0 ( 17) THR736 0 0 0 0 2 0 0 0 0 0 ( 20) ARG739 0 0 0 0 5 12 5 0 0 0 ( 42) ARG761 0 0 0 0 0 2 10 14 0 0 ( 44) GLU763 0 0 0 0 3 9 3 0 0 0 ( 45) HIS764 0 0 0 0 0 0 0 7 7 0 ( 48) GLN767 0 0 0 0 0 0 0 1 11 8 prot.sequence nklkcphcsyvakYrRTlkRhllihtgvrsfscdicgklftRrEHvkQhslvh >8gpn_E:Histone-fold; title=HUMAN MENIN IN COMPLEX WITH H3K79ME2 NUCLEOSOME organism=? DNA sequence DA(J1):DT(I147) DC(J2):DG(I146) DA(J3):DT(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DG(J16):DC(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DC(J145):DG(I3) DA(J146):DT(I2) chainE ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdftdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirger >8grm_ABCDEFGH: title=CRYO-EM STRUCTURE OF PRC1 BOUND TO H2AK119-UBCH5B-UB NUCLEOSOME organism=? DNA sequence DT(J-72):DA(I72) DC(J-71):DG(I71) DG(J-70):DC(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DC(J70):DG(I-70) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 4) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlrDNiqgitkpairrlarrggvkrisgLiyeetrgvlkvflenviRdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhRllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/krsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/hrKvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflEnvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhRllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >8grm_C:Histone-fold; title=CRYO-EM STRUCTURE OF PRC1 BOUND TO H2AK119-UBCH5B-UB NUCLEOSOME organism=? DNA sequence DG(I-70):DC(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DC(I70):DG(J-70) DG(I71):DC(J-71) DA(I72):DT(J-72) chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) ARG32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RakaktrssraglqfpvgrvhRllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk >8grq_ABCDEFGH:Histone-fold; title=CRYO-EM STRUCTURE OF BRCA1/BARD1 BOUND TO H2AK127-UBCH5C-UB NUCLEOSOME organism=? DNA sequence DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG42 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlsaihakrvtimpkdiqlarrirger/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRYRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlsaihakrvtimpkdiqlarrirger/rdNIQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfg/aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8gui_G:Histone-fold; title=BRE1-NUCLEOSOME COMPLEX (MODEL I) organism=? DNA sequence DC(I1):DG(J147) DT(I2):DA(J146) DG(I3):DC(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DT(I145):DA(J3) DG(I146):DC(J2) DT(I147):DA(J1) chainG ( 4) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gkaRakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkkt >8guk_ABCDEFGH: title=HUMAN NUCLEOSOME CORE PARTICLE (FREE FORM) organism=? DNA sequence DC(I1):DG(J147) DT(I2):DA(J146) DG(I3):DC(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DT(I145):DA(J3) DG(I146):DC(J2) DT(I147):DA(J1) chainA ( 3) HIS39 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/lrdNIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfg/kaRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8guk_G:Histone-fold; title=HUMAN NUCLEOSOME CORE PARTICLE (FREE FORM) organism=? DNA sequence DC(I1):DG(J147) DT(I2):DA(J146) DG(I3):DC(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DT(I145):DA(J3) DG(I146):DC(J2) DT(I147):DA(J1) chainG ( 3) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kaRakaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkk >8gzg_CDFZ: title=CRYO-EM STRUCTURE OF SYNECHOCYSTIS SP. PCC 6803 RPITC organism=? DNA sequence DG(11):DC(250) DC(12):DG(249) DT(13):DA(248) DT(14):DA(247) DG(15):DC(246) DA(16):DT(245) DC(17):DG(244) DA(18):DT(243) DA(19):DT(242) DG(110):DC(241) DG(111):DC(240) DC(112):DG(239) DC(113):DG(238) DC(114):DG(237) DG(115):DC(236) DT(116):DA(235) DC(117):DG(234) DC(118):DG(233) DG(119):DC(232) DT(120):DA(231) DT(121):DA(230) DA(122):DT(229) DT(123):DA(228) DG(124):DC(227) DG(125):DC(226) DT(126):DA(225) DA(127):DG(219) DT(128):DG(218) DA(129):DG(217) DA(130):DA(216) DT(131):DG(215) DG(132):DC(214) DG(133):DT(213) DG(134):DG(212) DA(135):DA(211) DG(136):DG(210) DC(137):DT(29) DT(138):DG(28) DG(139):DC(27) DT(140):DC(26) DC(141):DT(25) DA(142):DA(24) DC(143):DC(23) DG(144):DG(22) DG(145):DT(21) chainC (115) ARG125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 (144) TRP154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 (146) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (160) LYS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (213) ARG225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (228) ARG242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 (285) ILE299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 (286) ASP300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (291) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 (378) LEU392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 (381) GLU395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 2 0 0 0 0 0 (382) ARG396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 (387) VAL401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 chainD (423) PRO434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 chainF ( 5) ASP71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 ( 11) LEU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ASN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) LEU200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) PHE233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ASP234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) LYS237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) TYR239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) SER242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) THR243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) TYR244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) THR246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) TRP247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) TRP248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) GLN251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) THR254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) ARG255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) VAL268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) HIS269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLU272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) ILE325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ASP330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) SER331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) PHE336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) GLU387 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG397 0 0 0 0 0 2 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) GLU398 0 0 3 10 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (290) ARG401 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) GLN402 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainZ (190) THR190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 (191) ALA191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dlieiqhasfhwfleeglieelnsfspisdytgklelhflgkdyklkqpkydvdeskrrdasysvqmyvptrlinketgeikeqevfigdlplmtergtfiingaervivnqivRspgvyykkeldkngrrtysaslipnrgaWlKfetdknglvyvriKtrklsaqvllkaiglsdneildslhpefyqktldkegnpteeealvelykklRppptvsggqqllesRffdpkrydlgrvgryklnkklrlneadttrvltpqdilaainylinlefdvgttddIDhlgnRrvrsvgellqnqirvglnrleriirermtvsesdaltpaslvnpkplvaaikeffgssqlsqfmdqtnplaelthkrrisalgpggLtrERagfaVrdihpshhgricpvetpegpnagligslatcarvndygfietpyfrvesgrvrkdldpvyltadeeddmrvapgdiptdeegniigesvpiryrqefsttspeqvdyvavspvqiisvatsmipflehddanralmgsnmqrqavpllrperplvgtgleaqaardsgmvivsrthgivtyvdateirvqphsgeeivypiqkyqrsnqdtclnqrplvyagedvvpgqvladgsateggelalgqnilvaympwegynyedailiserlvyddvytsihiekfeiearqtklgpeeitreipnvgedalrnldehgiirigawvesgdilvgkvtpkgeadqppeekllraifgekardvrdnslrvpngekgrvvdvrvftrekgdelppganmvvriyvaqkrkiqvgdkmagrhgnkgiisrilpiedmpylpdgrpidialnplgvpsrmnvgqvfecllgwagenlgvrfkitpfdmygeeasrdtvhglleeasqrpnkdwvfnenhpgkiqvfdgrtgepfdrpitvgqaymlklvhlvddkiharstgpyslvtqqplggkaqqggqrfgemevwaleaygaayilqelltvksddmqgrnealnaivkgksiprpgtpesfkvlmrelqslgldiaahkvqlsedgesadae/prfdyvkiaiasperirqwgertlpngtvvgevtkpetinyrtlkpemdglfcekifgpskdwecwcgkykrvrhrgivcercgvevtesrvrrhrmgyiklaapvthvwylkgipsylsilldmalrdveqivyfnayvvlnpgnasnlqykqlltedqwveiedqielegievgigaeavqrllaelqleevaeklreeilaskgqkraklikrlrvidnfiathsqaewmtldvipvippdlrpmvqldggrfatsdlndlyrrvinrnnrlarlqeilapeiivrnekrmlqeavdalidngrrgrtvvgannralkslsdiiegkqgrfrqnllgkrvdysgrsvivvgpnlkiyqcglpremaielfqpfvihrliklgivnnikaakklilkgdpqiwsvleevitghpvmlnraPtlhrlgiqafepilvegraiqlhplvcpafnadfdgdqmavhvplsleaqcearllmlachnvlspatgkpivapsqdmvlgcyyltaenpnaqkgagryfagiedalraydhgqvdlhsqiwirhldedvvtekpdteviktedlgdgtvmkyyrerkiregiitqyiqttpgriiynktiaealvf/pyteDsIRiyLQeigrirLlraeeEielarqiadllelelirdnltlqlerqpselewgkqnknfaafrrrlfldrrakdkmvqsNlRLvvsiakkymnrglsfqdliqegslgliraaekFDheKgYkfSTYaTWWiRQaiTRaiadqsrtirlpVHlyEtisrikkttkllsqemrrkpteeeiaekmemtieklrfiaksaqlpisletpIgkeeDSrlgdFieadgetpedevsknllredlenvldtlsprerdvlrlryglddgrmktlEeigqifnvtREriRQieakalrklrhpnrnsilkeyir/mtfynytidkgrlkklialayrrygsarcsqladelkelgfrfatkagvsisvddltippekkqmleaaekeirtteeryargeiteverfqkvidtwngtseelkdqvvvnfrktdplnsvymmafsgargnmsqvrqlvgmrglmadpqgeiidlpiktnfregltvteyvissygarkglvdtalrTAdsgyltrrlvdvsqdvivreqdcgterslrvtamtdgdqvkisladrlfgrllakdvvgpdgeiiakrndeidealanriaavtdevyvrspltceaarsvcqncygwslahghkvdlgeavgiiaaqsigepgtqltvarqekapedgtvkwgkglstrkvrtrhgedaeqveiagdliwkgegkkqtysltpgsllfvqdgqtvtagqlmteislteratkdvagdlagevlfdrlvpeektdrqgnttriaqrgglvwilsgevynlppgaepvvkndeqvevgsimaetklvtndggvvrlvsnreieiitasvlldqaqvklessggreqyviytadkqrfllkaapgtkvqnhsivaeliddryrtttggmiryagvevakggrkqgyevtkggtllwipeetheinkdisllivedgqyveagtevvkdifcqssgivevvqkndilreiiikpgdfyqdvdpgsvkiesgqllqpgqdvfpgvtvstlsqaewiespegglllrpveeykvfdepaapsqgsqneeggrqielrsvqrlfykdgdrvksvegapllstqlvleiyhlsadielqddeeedcqrlqlvileslvlrrdesdplggasktrllvqdgdqippgavvarteiqckeagtvrgikegqesirrvlleraadrlvvdlpsapevkpgqllvagqelvpgvkleesgkvleiyqlvlrrarpyrvspgavlhiedgdlvqrgdnlvllvfervqglprieellearkpkeacvlarapgvcqveesvdikvveddgtvseypllpgqnamvtdgqridvghaltdgynnpheildvffsyyvdkdgcyqaalrglqaaqkflvnevqtvyqsqgvdisdkhievivrqmtakvriddggdttmlpgelvelrqveqvneamgitgsaarytpvllgitkaslntdsfisaasfqettrvlteaaiegksdwlrglkenviigrlipagtgfs >8gzg_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF SYNECHOCYSTIS SP. PCC 6803 RPITC organism=? DNA sequence DT(21):DG(145) DG(22):DG(144) DC(23):DC(143) DA(24):DA(142) DT(25):DC(141) DC(26):DT(140) DC(27):DG(139) DG(28):DT(138) DT(29):DC(137) DG(210):DG(136) DA(211):DA(135) DG(212):DG(134) DT(213):DG(133) DC(214):DG(132) DG(215):DT(131) DA(216):DA(130) DG(217):DA(129) DG(218):DT(128) DG(219):DA(127) DA(225):DT(126) DC(226):DG(125) DC(227):DG(124) DA(228):DT(123) DT(229):DA(122) DA(230):DT(121) DA(231):DT(120) DC(232):DG(119) DG(233):DC(118) DG(234):DC(117) DA(235):DT(116) DC(236):DG(115) DG(237):DC(114) DG(238):DC(113) DG(239):DC(112) DC(240):DG(111) DC(241):DG(110) DT(242):DA(19) DT(243):DA(18) DG(244):DC(17) DT(245):DA(16) DC(246):DG(15) DA(247):DT(14) DA(248):DT(13) DG(249):DC(12) DC(250):DG(11) chainF ( 5) ASP71 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG74 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) LEU77 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ASN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG199 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) LEU200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) PHE233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ASP234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) LYS237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) TYR239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) SER242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) THR243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) TYR244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) THR246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) TRP247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) TRP248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) GLN251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) THR254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) ARG255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) VAL268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) HIS269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLU272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) ILE325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ASP330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) SER331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) PHE336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (276) GLU387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (286) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 2 0 0 0 0 0 (287) GLU398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 10 3 0 0 (290) ARG401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (291) GLN402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 prot.sequence pyteDsIRiyLQeigrirLlraeeEielarqiadllelelirdnltlqlerqpselewgkqnknfaafrrrlfldrrakdkmvqsNlRLvvsiakkymnrglsfqdliqegslgliraaekFDheKgYkfSTYaTWWiRQaiTRaiadqsrtirlpVHlyEtisrikkttkllsqemrrkpteeeiaekmemtieklrfiaksaqlpisletpIgkeeDSrlgdFieadgetpedevsknllredlenvldtlsprerdvlrlryglddgrmktlEeigqifnvtREriRQieakalrklrhpnrnsilkeyir >8gzh_CDFZ: title=CRYO-EM STRUCTURE OF SYNECHOCYSTIS SP. PCC 6803 CTP-BOUND RPITC organism=? DNA sequence DG(11):DC(250) DC(12):DG(249) DT(13):DA(248) DT(14):DA(247) DG(15):DC(246) DA(16):DT(245) DC(17):DG(244) DA(18):DT(243) DA(19):DT(242) DG(110):DC(241) DG(111):DC(240) DC(112):DG(239) DC(113):DG(238) DC(114):DG(237) DG(115):DC(236) DT(116):DA(235) DC(117):DG(234) DC(118):DG(233) DG(119):DC(232) DT(120):DA(231) DT(121):DA(230) DA(122):DT(229) DT(123):DA(228) DG(124):DC(227) DG(125):DC(226) DT(126):DA(225) DA(127):DA(224) DT(128):DT(223) DA(129):DA(222) DA(130):DA(221) DT(131):DT(220) DG(132):DG(219) DG(133):DG(218) DA(134):DA(217) DG(135):DG(216) DG(136):DG(215) DC(137):DC(214) DT(138):DT(213) DG(139):DG(212) DT(140):DA(211) DC(141):DG(210) DA(142):DT(29) DC(143):DG(28) DG(144):DC(27) DG(145):DC(26) DA(146):DT(25) DT(147):DA(24) DG(148):DC(23) DC(149):DG(22) DA(150):DT(21) chainC (116) ARG125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (145) TRP154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 (161) ASP170 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 3 0 0 0 0 0 0 0 0 0 0 0 0 (162) LYS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) PRO229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (230) ARG242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) ILE299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 (288) ASP300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (293) ARG305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (312) ARG324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ILE328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) PRO351 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) LYS357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (346) GLU358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (380) LEU392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (383) GLU395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (384) ARG396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 (389) VAL401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 chainD (208) GLN219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (255) ARG266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (422) ALA433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (423) PRO434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 chainF ( 5) ASP71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) LEU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ASN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) LEU200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ARG211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) PHE233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ASP234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) LYS237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) TYR239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) SER242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) THR243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) TYR244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) THR246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) TRP247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) TRP248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) GLN251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) THR254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) ARG255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) VAL268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) HIS269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLU272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) ILE325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ASP330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) SER331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) PHE336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) GLU398 0 0 4 11 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) ARG399 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) GLN402 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainZ (190) THR190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 (191) ALA191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (330) MET330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pdlieiqhasfhwfleeglieelnsfspisdytgklelhflgkdyklkqpkydvdeskrrdasysvqmyvptrlinketgeikeqevfigdlplmtergtfiingaervivnqivRspgvyykkeldkngrrtysaslipnrgaWlkfetdknglvyvriDKtrklsaqvllkaiglsdneildslshpefyqktldkegnpteeealvelykklrPptvsggqqllesRffdpkrydlgrvgryklnkklrlneadttrvltpqdilaainylinlefdvgttddIDhlgnRrvrsvgellqnqirvglnRlerIirermtvsesdaltpaslvnpkPlvaaiKEffgssqlsqfmdqtnplaelthkrrisalgpggLtrERagfaVrdihpshhgricpvetpegpnagligslatcarvndygfietpyfrvesgrvrkdldpvyltadeeddmrvapgdiptdeegniigesvpiryrqefsttspeqvdyvavspvqiisvatsmipflehddanralmgsnmqrqavpllrperplvgtgleaqaardsgmvivsrthgivtyvdateirvqphsgeeivypiqkyqrsnqdtclnqrplvyagedvvpgqvladgsateggelalgqnilvaympwegynyedailiserlvyddvytsihiekfeiearqtklgpeeitreipnvgedalrnldehgiirigawvesgdilvgkvtpkgeadqppeekllraifgekardvrdnslrvpngekgrvvdvrvftrekgdelppganmvvriyvaqkrkiqvgdkmagrhgnkgiisrilpiedmpylpdgrpidialnplgvpsrmnvgqvfecllgwagenlgvrfkitpfdemygeeasrdtvhglleeasqrpnkdwvfnenhpgkiqvfdgrtgepfdrpitvgqaymlklvhlvddkiharstgpyslvtqqplggkaqqggqrfgemevwaleaygaayilqelltvksddmqgrnealnaivkgksiprpgtpesfkvlmrelqslgldiaahkvqlsedgesadae/prfdyvkiaiasperirqwgertlpngtvvgevtkpetinyrtlkpemdglfcekifgpskdwecwcgkykrvrhrgivcercgvevtesrvrrhrmgyiklaapvthvwylkgipsylsilldmalrdveqivyfnayvvlnpgnasnlqykqlltedqwveiedqielegievgigaeavqrllaelqleevaeklreeilaskgQkraklikrlrvidnfiathsqaewmtldvipvippdlrpmvqldggRfatsdlndlyrrvinrnnrlarlqeilapeiivrnekrmlqeavdalidngrrgrtvvgannralkslsdiiegkqgrfrqnllgkrvdysgrsvivvgpnlkiyqcglpremaielfqpfvihrliklgivnnikaakklilkgdpqiwsvleevitghpvmlnrAPtlhrlgiqafepilvegraiqlhplvcpafnadfdgdqmavhvplsleaqcearllmlachnvlspatgkpivapsqdmvlgcyyltaenpnaqkgagryfagiedalraydhgqvdlhsqiwirhldedvvtekpdteviktedlgdgtvmkyyrerkiregvdgeiitqyiqttpgriiynktiaealvf/pyteDsIRiyLQeigrirLlraeeEielarqiadllelelirdnltlqlerqpselewgkqnknfaafrrrlfldrrakdkmvqsNlRLvvsiakkymNRglsfqdliqegslgliraaekFDheKgYkfSTYaTWWiRQaiTRaiadqsrtirlpVHlyEtisrikkttkllsqemrrkpteeeiaekmemtieklrfiaksaqlpisletpIgkeeDSrlgdFieadgetpedevsknllredlenvldtlsprerdvlrlryglddgrmktleeigqifnvtrERirQieakalrklrhpnrnsilkeyir/mtfynytidkgrlkklialayrrygsarcsqladelkelgfrfatkagvsisvddltippekkqmleaaekeirtteeryargeiteverfqkvidtwngtseelkdqvvvnfrktdplnsvymmafsgargnmsqvrqlvgmrglmadpqgeiidlpiktnfregltvteyvissygarkglvdtalrTAdsgyltrrlvdvsqdvivreqdcgterslrvtamtdgdqvkisladrlfgrllakdvvgpdgeiiakrndeidealanriaavtdevyvrspltceaarsvcqncygwslahghkvdlgeavgiiaaqsigepgtqltMrtfhtggvftgevarqekapedgtvkwgkglstrkvrtrhgedaeqveiagdliwkgegkkaatqtysltpgsllfvqdgqtvtagqlmteislsktqrsteratkdvagdlagevlfdrlvpeektdrqgnttriaqrgglvwilsgevynlppgaepvvkndeqvevgsimaetklvtndggvvrlvsnreieiitasvlldqaqvklessggreqyviytadkqrfllkaapgtkvqnhsivaeliddryrtttggmiryagvevakggrkqgyevtkggtllwipeetheinkdisllivedgqyveagtevvkdifcqssgivevvqkndilreiiikpgdfyqdvdpgsvkiesgqllqpgqdvfpgvtvstlsqaewiespegnglllrpveeykvfdepaapsqgsqneeggrqielrsvqrlfykdgdrvksvegapllstqlvleiyshlsadielqddeeedcqrlqlvileslvlrrdqesdplggasktrllvqdgdqippgavvarteiqckeagtvrgikegqesirrvlleraadrlvvdlpsapevkpgqllvagqelvpgvkleesgkvleingkgdnyqlvlrrarpyrvspgavlhiedgdlvqrgdnlvllvferaktgdivqglprieellearkpkeacvlarapgvcqveyledesvdikvveddgtvseypllpgqnamvtdgqridvghaltdgynnpheildvffsyyvdkdgcyqaalrglqaaqkflvnevqtvyqsqgvdisdkhievivrqmtakvriddggdttmlpgelvelrqveqvneamgitgsaparytpvllgitkaslntdsfisaasfqettrvlteaaiegksdwlrglkenviigrlipagtgfs >8gzh_F:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF SYNECHOCYSTIS SP. PCC 6803 CTP-BOUND RPITC organism=? DNA sequence DG(11):DC(250) DC(12):DG(249) DT(13):DA(248) DT(14):DA(247) DG(15):DC(246) DA(16):DT(245) DC(17):DG(244) DA(18):DT(243) DA(19):DT(242) DG(110):DC(241) DG(111):DC(240) DC(112):DG(239) DC(113):DG(238) DC(114):DG(237) DG(115):DC(236) DT(116):DA(235) DC(117):DG(234) DC(118):DG(233) DG(119):DC(232) DT(120):DA(231) DT(121):DA(230) DA(122):DT(229) DT(123):DA(228) DG(124):DC(227) DG(125):DC(226) DT(126):DA(225) DA(127):DA(224) DT(128):DT(223) DA(129):DA(222) DA(130):DA(221) DT(131):DT(220) DG(132):DG(219) DG(133):DG(218) DA(134):DA(217) DG(135):DG(216) DG(136):DG(215) DC(137):DC(214) DT(138):DT(213) DG(139):DG(212) DT(140):DA(211) DC(141):DG(210) DA(142):DT(29) DC(143):DG(28) DG(144):DC(27) DG(145):DC(26) DA(146):DT(25) DT(147):DA(24) DG(148):DC(23) DC(149):DG(22) DA(150):DT(21) chainF ( 5) ASP71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ILE73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) LEU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) GLN78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) GLU91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ASN197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) LEU200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ARG211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) PHE233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) ASP234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) LYS237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) TYR239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) SER242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) THR243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) TYR244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) THR246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) TRP247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) TRP248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) GLN251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) THR254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) ARG255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) VAL268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) HIS269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLU272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (214) ILE325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ASP330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) SER331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (225) PHE336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) GLU398 0 0 4 11 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (288) ARG399 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) GLN402 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pyteDsIRiyLQeigrirLlraeeEielarqiadllelelirdnltlqlerqpselewgkqnknfaafrrrlfldrrakdkmvqsNlRLvvsiakkymNRglsfqdliqegslgliraaekFDheKgYkfSTYaTWWiRQaiTRaiadqsrtirlpVHlyEtisrikkttkllsqemrrkpteeeiaekmemtieklrfiaksaqlpisletpIgkeeDSrlgdFieadgetpedevsknllredlenvldtlsprerdvlrlryglddgrmktleeigqifnvtrERirQieakalrklrhpnrnsilkeyir >8h0l_B: title=SULFUR BINDING DOMAIN OF HGA COMPLEXED WITH PHOSPHOROTHIOATED DNA organism=? DNA sequence DC(E1):DG(F10) DG(E2):DC(F9) DA(E3):DT(F8) DG(E4):DC(F7) PST(E5):DA(F6) DT(E6):DA(F5) DC(E7):DG(F4) DG(E8):DC(F3) DG(E9):DC(F2) DC(E10):DG(F1) chainB ( 16) ASN16 0 0 0 5 0 0 0 0 0 0 ( 70) ARG70 0 0 0 0 0 0 7 0 0 0 ( 72) ASN72 0 0 0 0 0 1 0 0 0 0 ( 75) LEU75 0 0 0 0 1 3 0 0 0 0 ( 79) HIS79 0 0 0 2 3 0 0 0 0 0 (104) SER104 0 0 0 0 0 0 0 1 0 0 prot.sequence mslleyeakfselnpNrrhgntsphkiamllavmdliesgslqenriyfdrqlkdaftkrfnelkseadRdNphLpyyHlhtsgfwhhqvnpgqresyktmsaSgasaidqhiayayldeelfellqnftvrklltsaldrnfait >8h1j_A:ArfGap/RecO-like_zinc_finger; title=CRYO-EM STRUCTURE OF THE TNPB-OMEGARNA-TARGET DNA TERNARY COMPLEX organism=? DNA sequence DA(C17):DT(D-1) DT(C18):DA(D-2) DC(C19):DG(D-3) DA(C20):DT(D-4) DA(C21):DT(D-5) DT(C22):DA(D-6) DA(C23):DT(D-7) DG(C24):DC(D-8) DA(C25):DT(D-9) DA(C26):DT(D-10) chainA ( 52) TYR52 8 0 0 0 0 0 0 0 0 0 ( 56) SER56 2 0 0 0 0 0 0 0 0 0 ( 76) LYS76 0 2 12 7 0 0 0 0 0 0 ( 77) PHE77 0 4 0 3 0 0 0 0 0 0 ( 80) GLN80 3 7 2 0 0 0 0 0 0 0 ( 84) LYS84 2 0 0 0 0 0 0 0 0 0 (121) GLN121 6 2 0 0 0 0 0 0 0 0 (123) THR123 0 0 5 4 1 0 0 0 0 0 (124) ASN124 0 0 0 1 7 3 0 0 0 0 (126) ASN126 0 0 0 0 1 0 0 0 0 0 prot.sequence mirnkafvvrlypnaaqtelinrtlgsarfvynhflarriaaykesgkgltYgqtSseltllkqaeetswlsevdKFalQnslKnletayknffrtvkqsgkkvgfprfrkkrtgesyrtQfTNnNiqigegrlklpklgwvktkgqqdiqgkilnvtvrriheghyeasvlceveipylpaapkfaagvdvgikdfaivtdgvrfkheqnpkyyrstlkrlrkaqqtlsrrkkgsarygkaktklarihkrivnkrqdflhklttslvreyeiigtehldagwgefirqleykaawygrlvskvspyfpssqlchdcgfknpevknlavrtwtcpncgethdrdenaalnirrealvaagi >8h1t_L:Cysteine_proteinases; title=CRYO-EM STRUCTURE OF BAP1-ASXL1 BOUND TO CHROMATOSOME organism=? DNA sequence DC(I1):DG(J167) DC(I2):DG(J166) DG(I3):DC(J165) DG(I4):DC(J164) DA(I5):DT(J163) DT(I6):DA(J162) DC(I7):DG(J161) DC(I8):DG(J160) DC(I9):DG(J159) DC(I10):DG(J158) DT(I11):DA(J157) DG(I12):DC(J156) DG(I13):DC(J155) DA(I14):DT(J154) DG(I15):DC(J153) DA(I16):DT(J152) DA(I17):DT(J151) DT(I18):DA(J150) DC(I19):DG(J149) DC(I20):DG(J148) DC(I21):DG(J147) DG(I22):DC(J146) DG(I23):DC(J145) DT(I24):DA(J144) DG(I25):DC(J143) DC(I26):DG(J142) DC(I27):DG(J141) DG(I28):DC(J140) DA(I29):DT(J139) DG(I30):DC(J138) DG(I31):DC(J137) DC(I32):DG(J136) DC(I33):DG(J135) DG(I34):DC(J134) DC(I35):DG(J133) DT(I36):DA(J132) DC(I37):DG(J131) DA(I38):DT(J130) DA(I39):DT(J129) DT(I40):DA(J128) DT(I41):DA(J127) DG(I42):DC(J126) DG(I43):DC(J125) DT(I44):DA(J124) DC(I45):DG(J123) DG(I46):DC(J122) DT(I47):DA(J121) DA(I48):DT(J120) DG(I49):DC(J119) DA(I50):DT(J118) DC(I51):DG(J117) DA(I52):DT(J116) DG(I53):DC(J115) DC(I54):DG(J114) DT(I55):DA(J113) DC(I56):DG(J112) DT(I57):DA(J111) DA(I58):DT(J110) DG(I59):DC(J109) DC(I60):DG(J108) DA(I61):DT(J107) DC(I62):DG(J106) DC(I63):DG(J105) DG(I64):DC(J104) DC(I65):DG(J103) DT(I66):DA(J102) DT(I67):DA(J101) DA(I68):DT(J100) DA(I69):DT(J99) DA(I70):DT(J98) DC(I71):DG(J97) DG(I72):DC(J96) DC(I73):DG(J95) DA(I74):DT(J94) DC(I75):DG(J93) DG(I76):DC(J92) DT(I77):DA(J91) DA(I78):DT(J90) DC(I79):DG(J89) DG(I80):DC(J88) DC(I81):DG(J87) DG(I82):DC(J86) DC(I83):DG(J85) DT(I84):DA(J84) DG(I85):DC(J83) DT(I86):DA(J82) DC(I87):DG(J81) DC(I88):DG(J80) DC(I89):DG(J79) DC(I90):DG(J78) DC(I91):DG(J77) DG(I92):DC(J76) DC(I93):DG(J75) DG(I94):DC(J74) DT(I95):DA(J73) DT(I96):DA(J72) DT(I97):DA(J71) DT(I98):DA(J70) DA(I99):DT(J69) DA(I100):DT(J68) DC(I101):DG(J67) DC(I102):DG(J66) DG(I103):DC(J65) DC(I104):DG(J64) DC(I105):DG(J63) DA(I106):DT(J62) DA(I107):DT(J61) DG(I108):DC(J60) DG(I109):DC(J59) DG(I110):DC(J58) DG(I111):DC(J57) DA(I112):DT(J56) DT(I113):DA(J55) DT(I114):DA(J54) DA(I115):DT(J53) DC(I116):DG(J52) DT(I117):DA(J51) DC(I118):DG(J50) DC(I119):DG(J49) DC(I120):DG(J48) DT(I121):DA(J47) DA(I122):DT(J46) DG(I123):DC(J45) DT(I124):DA(J44) DC(I125):DG(J43) DT(I126):DA(J42) DC(I127):DG(J41) DC(I128):DG(J40) DA(I129):DT(J39) DG(I130):DC(J38) DG(I131):DC(J37) DC(I132):DG(J36) DA(I133):DT(J35) DC(I134):DG(J34) DG(I135):DC(J33) DT(I136):DA(J32) DG(I137):DC(J31) DT(I138):DA(J30) DC(I139):DG(J29) DA(I140):DT(J28) DC(I141):DG(J27) DA(I142):DT(J26) DT(I143):DA(J25) DA(I144):DT(J24) DT(I145):DA(J23) DA(I146):DT(J22) DT(I147):DA(J21) DA(I148):DT(J20) DC(I149):DG(J19) DA(I150):DT(J18) DT(I151):DA(J17) DC(I152):DG(J16) DC(I153):DG(J15) DT(I154):DA(J14) DG(I155):DC(J13) DT(I156):DA(J12) DT(I157):DA(J11) DC(I158):DG(J10) DC(I159):DG(J9) DA(I160):DT(J8) DG(I161):DC(J7) DT(I162):DA(J6) DG(I163):DC(J5) DC(I164):DG(J4) DC(I165):DG(J3) DG(I166):DC(J2) DG(I167):DC(J1) chainL (287) ARG701 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kgwlelesdpglftllvedfgvkgvqveeiydlqskcqgpvygfiflfkwieerrsrrkvstlvddtsvidddivnnmffahqlipnssathallsvllncssvdlgptlsrmkdftkgfspeskgyaignapelakahnsharpeprhlpetmeafhfvsyvpitgrlfeldglkvypidhgpwgedeewtdkarrvimeriglatagepyhdirfnlmavvpdrrikyeaeaclkeevekrkkfkiddqrrthnydefictfismlaqegmlanlveqnisvrrRqgvsigrlhkqrkp >8h3v_X:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF THE FULL TRANSCRIPTION ACTIVATION COMPLEX NTCA- NTCB-TAC organism=? DNA sequence DT(112):DA(2114) DG(113):DC(2113) DC(114):DG(2112) DA(115):DT(2111) DA(116):DT(2110) DA(117):DT(2109) DA(118):DT(2108) DA(119):DT(2107) DA(120):DT(2106) DC(121):DG(2105) DG(122):DC(2104) DC(123):DG(2103) DA(124):DT(2102) DT(125):DA(2101) DA(126):DT(2100) DT(127):DA(299) DT(128):DA(298) DC(129):DG(297) DT(130):DA(296) DC(131):DG(295) DT(132):DA(294) DA(133):DT(293) DT(134):DA(292) DG(135):DC(291) DC(136):DG(290) DA(137):DT(289) DA(138):DT(288) DA(139):DT(287) DA(140):DT(286) DA(141):DT(285) DA(142):DT(284) DC(143):DG(283) DG(144):DC(282) DC(145):DG(281) DA(146):DT(280) DT(147):DA(279) DT(148):DA(278) DA(149):DT(277) DA(150):DT(276) DT(151):DA(275) DA(152):DT(274) DC(153):DG(273) DG(154):DC(272) DA(155):DT(271) DG(156):DC(270) DA(157):DT(269) DA(158):DT(268) DT(159):DA(267) DT(160):DA(266) DT(161):DA(265) DT(162):DA(264) DG(163):DC(263) DT(164):DA(262) DA(165):DT(261) DG(166):DC(260) DC(167):DG(259) DT(168):DA(258) DA(169):DT(257) DC(170):DG(256) DT(171):DA(255) DT(172):DA(254) DA(173):DT(253) DT(174):DA(252) DA(175):DT(251) DC(176):DG(250) DA(177):DT(249) DA(178):DT(248) DA(179):DT(247) DA(180):DT(246) DT(181):DA(245) DT(182):DA(244) DC(183):DG(243) DA(184):DT(242) DG(185):DC(241) DG(186):DC(240) DA(187):DT(239) DA(188):DT(238) DA(189):DT(237) DA(190):DT(236) DT(191):DA(235) DT(192):DA(234) DT(193):DA(233) DT(194):DA(232) DT(195):DA(231) DC(196):DG(230) DT(197):DA(229) DG(198):DC(228) DT(199):DA(227) DA(1100):DG(210) DT(1101):DC(29) DA(1102):DC(28) DA(1103):DT(27) DT(1104):DA(26) DG(1105):DC(25) DG(1106):DG(24) DG(1107):DT(23) chainX (163) ARG187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) VAL188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) THR191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vetfernktiffpgdpaervyfllkgavklsrvyeageeitvallrensvfgvlslltgnksdrfyhavaftpvellsapieqveqalkenpelsmlmlrglssrilqtemmietlahrdmgsrlvsfllilcrdfgvpcadgitidlklshqaiaeaigstRVtvTRllgdlrekkmisihkkkitvhkpvtlsr >8h40_AEGXY: title=CRYO-EM STRUCTURE OF THE TRANSCRIPTION ACTIVATION COMPLEX NTCA-TAC organism=? DNA sequence DT(23):DT(1111) DG(24):DC(1110) DC(25):DG(1109) DA(26):DA(1108) DT(27):DG(1107) DC(28):DG(1106) DC(29):DG(1105) DG(210):DT(1104) DT(211):DA(1103) DG(212):DA(1102) DA(213):DT(1101) DA(226):DA(1100) DA(227):DT(199) DC(228):DG(198) DA(229):DT(197) DG(230):DC(196) DA(231):DT(195) DA(232):DT(194) DA(233):DT(193) DA(234):DT(192) DA(235):DT(191) DT(236):DA(190) DT(237):DA(189) DT(238):DA(188) DT(239):DA(187) DC(240):DG(186) DC(241):DG(185) DT(242):DA(184) DG(243):DC(183) DA(244):DT(182) DA(245):DT(181) DT(246):DA(180) DT(247):DA(179) DT(248):DA(178) DT(249):DA(177) DG(250):DC(176) DT(251):DA(175) DA(252):DT(174) DT(253):DA(173) DA(254):DT(172) DA(255):DT(171) DG(256):DC(170) DT(257):DA(169) DA(258):DT(168) DG(259):DC(167) DC(260):DG(166) DT(261):DA(165) DA(262):DT(164) DC(263):DG(163) DA(264):DT(162) DA(265):DT(161) DA(266):DT(160) DA(267):DT(159) DT(268):DA(158) chainA (149) TRP172 56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (151) LYS174 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ASP188 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) LYS189 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) ARG243 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (223) GLU246 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (390) GLU413 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainG ( 4) ASP80 0 0 0 0 3 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ILE82 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG83 0 0 0 0 4 24 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) LEU86 0 0 0 0 0 1 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) LEU94 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG164 0 0 0 0 0 0 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) LEU165 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ARG176 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) TYR204 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE206 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) SER207 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) THR208 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) TYR209 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) TRP212 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (140) GLN216 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) THR219 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) ARG220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) HIS234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) GLU237 0 0 0 0 0 0 0 0 0 0 0 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) GLU363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainX (163) ARG187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) VAL190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainY (162) THR186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 (163) ARG187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 1 0 0 0 0 (164) VAL188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 (167) THR191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence afllpdlieiqrssfrwfleeglieelnsfspitdytgklelhflghnyklkepkysveeakrrdstyavqmyvptrllnketgdikeqevfigdlplmtdrgtfiingaervivnqivrspgvyykseidkngrrtysaslipnrgaWlKfetdrndlvwvriDKtrklsaqvllkalglsdneifdalrhpeyfqktiekegqfseeealmelyrklRpgEpptvlggqqlldsrffdpkrydlgrvgryklnkklrlsvpdtvrvltsgdilaavdylinleydigsiddidhlgnrrvrsvgellqnqvrvglnrleriirermtvsdaevltpaslvnpkplvaaikeffgssqlsqfmdqtnplaelthkrrlsalgpggltrEragfavrdihpshygricpietpegpnagligslatharvnqygfletpfrpvengrvrfdqpaaymtadeeddlrvapgdipvdengyiigpqvpvryrqefstttpeqvdyvavspvqivsvatsmipflehddanralmgsnmqrqavpllkperplvgtgleaqgardsgmvivsrtdgdvvyvdateirvrvsgqlptasgkstdngqltsqkgqeirytvskyqrsnqdtclnqkplvrigervvagqvladgssteggelalgqnivvaympwegynyedailiserlvqddiytsihiekyeiearqtklgpeeitreipnvgedalrqldeqgiirigawveagdilvgkvtpkgesdqppeekllraifgekardvrdnslrvpngekgrvvdvrlftreqgdelppganmvvrvyvaqkrkiqvgdkmagrhgnkgiisrilpiedmpylpdgspvdivlnplgvpsrmnvgqvfecllgwaghtlgvrfkitpfdemygeessrrivhgklqeardetgkdwvynpddpgkimvydgrtgeafdrpvtigvaymlklvhlvddkiharstgpyslvtqqplggkaqqggqrfgemevwaleafgaaytlqelltvksddmqgrnealnaivkgkaiprpgtpesfkvlmrelqslgldiavhkvetqadgssldv/tnqfdyvkiglasperirqwgertlpngqvvgevtkpetinyrtlkpemdglfcerifgpakdwechcgkykrvrhrgivcercgvevtesrvrrhrmgyiklaapvahvwylkgipsyisilldmplrdveqivyfnsyvvlspgnaEtLtykqllsedqwleIEdqiysedsqlqgvevgigaeallrlladinleqeaeslreeigsakgqkraklIkrLrvidnfiatgskpewmvmtvipvippdlrpmvqldggrfatsdlndlyrrvinrnnrlarlqeilapeiivrnekrmlqeavdalidngrrgrtvvgannrplkslsdiiegkqgrfrqnllgkrvdysgrsvivvgpklkihqcglpremaielfqpfvinrlirSgmvnnikaakklisrndpsvwdvleevieghpvmlnraptlhrlgiqafepilvegraiqlhplvcpafnadfdgdqmavhvplslesqaearllmlasnnilspatgrpiitpsqdmvlgayyltaenpgatkgagkyfaslddvimafqqeqidlhayvyvrfdgdvesdqpdtepvkvttnedgsrtvlykyrrvredaqgnvisqyiyttpgrviynkaiqealas/yteDsIRlyLqeigrirLlradeeielarkiadllelervrerlseklerdprdsewaeavqlplpafryrlhigrrakdkmvqsnlRLvvsiakkymnRglsfqdliqegslgliraaekfdhekgYkFSTYatWwirQaiTRaiadqsrtirlpvHlyEtisrikkttkllsqemgrkpteeeiatrmemtieklrfiaksaqlpisletpigkeedsrlgdfiesdgetpedqvsknllredlekvldslsprerdvlrlryglddgrmktleeigqifnvtrErirqieakalrklrhpnrnsvlkeyir/vetfernktiffpgdpaervyfllkgavklsrvyeageeitvallrensvfgvlslltgnksdrfyhavaftpvellsapieqveqalkenpelsmlmlrglssrilqtemmietlahrdmgsrlvsfllilcrdfgvpcadgitidlklshqaiaeaigstRvtVtRllgdlrekkmisihkkkitvhkpvtlsr/vetfernktiffpgdpaervyfllkgavklsrvyeageeitvallrensvfgvlslltgnksdrfyhavaftpvellsapieqveqalkenpelsmlmlrglssrilqtemmietlahrdmgsrlvsfllilcrdfgvpcadgitidlklshqaiaeaigsTRVtvTrllgdlrekkmisihkkkitvhkpvtlsr >8h40_Y:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain; title=CRYO-EM STRUCTURE OF THE TRANSCRIPTION ACTIVATION COMPLEX NTCA-TAC organism=? DNA sequence DT(23):DT(1111) DG(24):DC(1110) DC(25):DG(1109) DA(26):DA(1108) DT(27):DG(1107) DC(28):DG(1106) DC(29):DG(1105) DG(210):DT(1104) DT(211):DA(1103) DG(212):DA(1102) DA(213):DT(1101) DA(226):DA(1100) DA(227):DT(199) DC(228):DG(198) DA(229):DT(197) DG(230):DC(196) DA(231):DT(195) DA(232):DT(194) DA(233):DT(193) DA(234):DT(192) DA(235):DT(191) DT(236):DA(190) DT(237):DA(189) DT(238):DA(188) DT(239):DA(187) DC(240):DG(186) DC(241):DG(185) DT(242):DA(184) DG(243):DC(183) DA(244):DT(182) DA(245):DT(181) DT(246):DA(180) DT(247):DA(179) DT(248):DA(178) DT(249):DA(177) DG(250):DC(176) DT(251):DA(175) DA(252):DT(174) DT(253):DA(173) DA(254):DT(172) DA(255):DT(171) DG(256):DC(170) DT(257):DA(169) DA(258):DT(168) DG(259):DC(167) DC(260):DG(166) DT(261):DA(165) DA(262):DT(164) DC(263):DG(163) DA(264):DT(162) DA(265):DT(161) DA(266):DT(160) DA(267):DT(159) DT(268):DA(158) chainY (162) THR186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 (163) ARG187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 13 1 0 0 0 0 (164) VAL188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 1 0 0 0 0 0 0 (167) THR191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence vetfernktiffpgdpaervyfllkgavklsrvyeageeitvallrensvfgvlslltgnksdrfyhavaftpvellsapieqveqalkenpelsmlmlrglssrilqtemmietlahrdmgsrlvsfllilcrdfgvpcadgitidlklshqaiaeaigsTRVtvTrllgdlrekkmisihkkkitvhkpvtlsr >8h7a_A: title=CRYSTAL STRUCTURE OF THE DIMER FORM KAT6A WH DOMAIN WITH ITS BOUND DOUBLE STRANDED DNA organism=Homo sapiens DNA sequence DG(C1):DC(D13) DG(C2):DC(D12) DT(C3):DA(D11) DC(C4):DG(D10) DC(C5):DG(D9) DG(C6):DC(D8) DA(C7):DT(D7) DC(C8):DG(D6) DG(C9):DC(D5) DG(C10):DC(D4) DA(C11):DT(D3) DC(C12):DG(D2) DC(C13):DG(D1) chainA ( 23) LYS24 0 0 0 0 0 0 0 8 14 18 0 0 0 ( 24) GLN25 0 0 0 0 0 0 2 7 8 0 0 0 0 prot.sequence vklanplytewileaikkvkkqKQrpseericnavssshgldrktvleqlelsvkdgtilkvsnkglnsykdpdnpg >8h7a_AB: title=CRYSTAL STRUCTURE OF THE DIMER FORM KAT6A WH DOMAIN WITH ITS BOUND DOUBLE STRANDED DNA organism=Homo sapiens DNA sequence DG(D1):DC(C13) DG(D2):DC(C12) DT(D3):DA(C11) DC(D4):DG(C10) DC(D5):DG(C9) DG(D6):DC(C8) DT(D7):DA(C7) DC(D8):DG(C6) DG(D9):DC(C5) DG(D10):DC(C4) DA(D11):DT(C3) DC(D12):DG(C2) DC(D13):DG(C1) chainA ( 23) LYS24 0 0 0 18 14 8 0 0 0 0 0 0 0 ( 24) GLN25 0 0 0 0 8 7 2 0 0 0 0 0 0 chainB ( 22) GLN23 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 23) LYS24 0 0 0 0 0 0 0 9 13 16 0 0 0 ( 24) GLN25 0 0 0 0 0 0 4 6 4 0 0 0 0 prot.sequence vklanplytewileaikkvkkqKQrpseericnavssshgldrktvleqlelsvkdgtilkvsnkglnsykdpdnpg/vklanplytewileaikkvkkQKQrpseericnavssshgldrktvleqlelsvkdgtilkvsnkglnsykdpdnpg >8h7a_EF: title=CRYSTAL STRUCTURE OF THE DIMER FORM KAT6A WH DOMAIN WITH ITS BOUND DOUBLE STRANDED DNA organism=Homo sapiens DNA sequence DG(H1):DC(G13) DG(H2):DC(G12) DT(H3):DA(G11) DC(H4):DG(G10) DC(H5):DG(G9) DG(H6):DC(G8) DA(H7):DT(G7) DC(H8):DG(G6) DG(H9):DC(G5) DG(H10):DC(G4) DA(H11):DT(G3) DC(H12):DG(G2) DC(H13):DG(G1) chainE ( 22) GLN23 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 23) LYS24 0 0 0 16 13 8 0 0 0 0 0 0 0 ( 24) GLN25 0 0 0 0 5 6 4 0 0 0 0 0 0 chainF ( 23) LYS24 0 0 0 0 0 0 0 8 13 18 0 0 0 ( 24) GLN25 0 0 0 0 0 0 2 7 6 0 0 0 0 prot.sequence vklanplytewileaikkvkkQKQrpseericnavssshgldrktvleqlelsvkdgtilkvsnkglnsykdpdnpg/vklanplytewileaikkvkkqKQrpseericnavssshgldrktvleqlelsvkdgtilkvsnkglnsykdpdnpgr >8h7q_ABCEFGHI: title=CRYO-EM STRUCTURE OF SYNECHOCYSTIS SP. PCC6714 CASCADE AT 3.8 ANGSTROM RESOLUTION organism=? DNA sequence DA(L20) DC(L21) DA(L22) DC(L23) DA(L24) DA(L25) DA(L26) DA(L27) DT(L28) DA(L29) DT(L30) DC(L31) DC(L32) DA(L33) DG(L34) DA(L35) DT(L36) DT(L37) DG(L38) DG(L39) DG(L40) DG(L41) DA(L42) DC(L43) DA(L44) DC(L45) DG(L46) DG(L47) DT(L48) DG(L49) DA(L50) DT(L51) DA(L52) DA(L53) DA(L54) chainB chainC ( 25) ASN27 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (137) GLN139 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LEU158 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 25) ASN27 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LEU75 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ASN151 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) LEU157 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LEU158 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) ASN27 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) TYR96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 96) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ASN151 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) LEU157 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LEU158 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 25) ASN27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) LEU75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) PRO141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (149) ASN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) SER155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) LEU157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) LEU158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 25) ASN27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 71) ASP73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 ( 73) LEU75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (149) ASN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (155) LEU157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 (156) LEU158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 chainI ( 25) ASN27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 ( 71) ASP73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (136) TYR138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (137) GLN139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 (149) ASN151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (150) SER152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (155) LEU157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 chainA ( 92) PRO120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 prot.sequence vtrylrlkapfaafrpfqsgsfrsttpvpsfsavyglllnlagieqrqevegkvtlikpkaelpklaiaigqvkpsstslinqqlhnywiaPvrrevlvnldliiglqspvefwqkldqglkgetvinryglpfagdnnflfdeiypiekpdlaswycplegacrltlwidrenntqttikvfspsdfrleppakawqqlpg/nlnlfatiltypapasviqkilkdgqkyaiispesmrnalremlielgqpnnrtrlhsedqlavefkeypnpdkfaddflfgymvaqtndaKemkklnrpakrdsifrcnmavavnpykythtafqypfalagkdcaakpewvkallqaiaelngvyefaprsvvarltpklvagyqtygfdaegnwlelsrltatdsdnldlpanefwlggelvrkmdqeqkaqleamgahlyanpeklfadladsflgv/nlnlfatiltypapasnyrgeseeNrsviqkilkdgqkyaiispesmrnalremlielgqpnnrtrlhsedqlavefkeypnpdkfaddflfgymvaqtndakemkklnrpakrdsifrcnmavavnpykydtvfyQsplnagdsawknstssalLhrevthtafqypfalagkdcaakpewvkallqaiaelngvaggharayyefaprsvvarltpklvagyqtygfdaegnwlelsrltatdsdnldlpanefwlggelvrkmdqeqkaqleamgahlyanpeklfadladsflgv/nlnlfatiltypapasnyrgeseeNrsviqkilkdgqkyaiispesmrnalremlielgqpnnrtrlhsedqLavefkeypnpdkfaddflfgymvaqtndakemkklnrpakrdsifrcnmavavnpykydtvfyqsplnagdsawkNstssaLLhrevthtafqypfalagkdcaakpewvkallqaiaelngvaggharayyefaprsvvarltpklvagyqtygfdaegnwlelsrltatdsdnldlpanefwlggelvrkmdqeqkaqleamgahlyanpeklfadladsflgv/nlnlfatiltypapasnyrgeseeNrsviqkilkdgqkyaiispesmrnalremlielgqpnnrtrlhsedqlavefkeypnpdkfaddflfgYmVaqtndakemkklnrpakrdsifrcnmavavnpykydtvfyqsplnagdsawkNstssaLLhrevthtafqypfalagkdcaakpewvkallqaiaelngvaggharayyefaprsvvarltpklvagyqtygfdaegnwlelsrltatdsdnldlpanefwlggelvrkmdqeqkaqleamgahlyanpeklfadladsflgv/nlnlfatiltypapasnyrgeseeNrsviqkilkdgqkyaiispesmrnalremlielgqpnnrtrlhsedqLavefkeypnpdkfaddflfgymvaqtndakemkklnrpakrdsifrcnmavavnpykydtvfyqsPlnagdsawkNstsSaLLhrevthtafqypfalagkdcaakpewvkallqaiaelngvaggharayyefaprsvvarltpklvagyqtygfdaegnwlelsrltatdsdnldlpanefwlggelvrkmdqeqkaqleamgahlyanpeklfadladsflgv/nlnlfatiltypapasnyrgeseeNrsviqkilkdgqkyaiispesmrnalremlielgqpnnrtrlhseDqLavefkeypnpdkfaddflfgymvaqtndakemkklnrpakrdsifrcnmavavnpykydtvfyqsplnagdsawkNstssaLLhrevthtafqypfalagkdcaakpewvkallqaiaelngvaggharayyefaprsvvarltpklvagyqtygfdaegnwlelsrltatdsdnldlpanefwlggelvrkmdqeqkaqleamgahlyanpeklfadladsflgv/nlnlfatiltypapasnyrgeseeNrsviqkilkdgqkyaiispesmrnalremlielgqpnnrtrlhseDqlavefkeypnpdkfaddflfgymvaqtndakemkklnrpakrdsifrcnmavavnpykydtvfYQsplnagdsawkNStssaLlhrevthtafqypfalagkdcaakpewvkallqaiaelngvaggharayyefaprsvvarltpklvagyqtygfdaegnwlelsrltatdslpanefwlggelvrkmdqeqkaqleamgahlyanpeklfadladsflgv >8h9h_G:beta-beta-alpha_zinc_fingers; title=CRYSTAL STRUCTURE OF ZBTB7A IN COMPLEX WITH GACCC-CONTAINING SEQUENCE organism=Homo sapiens DNA sequence DA(B1):DT(A12) DT(B2):DA(A11) DC(B3):DG(A10) DT(B4):DA(A9) DG(B5):DC(A8) DG(B6):DC(A7) DG(B7):DC(A6) DT(B8):DA(A5) DC(B9):DG(A4) DC(B10):DG(A3) DT(B11):DA(A2) DT(B12):DA(A1) chainG ( 15) ALA394 0 0 0 0 0 0 0 0 0 0 2 0 ( 17) LYS396 0 0 0 0 0 0 0 5 5 0 0 0 ( 20) ARG399 0 0 0 0 0 15 13 0 0 0 0 0 ( 42) ARG421 0 0 0 0 7 12 2 0 0 0 0 0 ( 44) ASP423 0 0 0 0 0 0 6 0 0 0 0 0 ( 45) LYS424 0 0 0 2 7 2 0 0 0 0 0 0 ( 72) TYR451 0 9 0 0 0 0 0 0 0 0 0 0 prot.sequence hmqkcpicekviqgAgKlpRhirthtgekpyecnickvrftRqDKlkvhmrkhtgekpylcqqcgaafahnYdlknhmrvh >8hag_B:Histone-fold; title=CRYO-EM STRUCTURE OF THE P300 CATALYTIC CORE BOUND TO THE H4K12ACK16AC NUCLEOSOME, CLASS 1 (3.2 ANGSTROM RESOLUTION) organism=? DNA sequence DC(J17):DG(I164) DA(J18):DT(I163) DT(J19):DA(I162) DC(J20):DG(I161) DA(J21):DT(I160) DA(J22):DT(I159) DT(J23):DA(I158) DA(J24):DT(I157) DT(J25):DA(I156) DC(J26):DG(I155) DC(J27):DG(I154) DA(J28):DT(I153) DC(J29):DG(I152) DC(J30):DG(I151) DT(J31):DA(I150) DG(J32):DC(I149) DC(J33):DG(I148) DA(J34):DT(I147) DG(J35):DC(I146) DA(J36):DT(I145) DT(J37):DA(I144) DT(J38):DA(I143) DC(J39):DG(I142) DT(J40):DA(I141) DA(J41):DT(I140) DC(J42):DG(I139) DC(J43):DG(I138) DA(J44):DT(I137) DA(J45):DT(I136) DA(J46):DT(I135) DA(J47):DT(I134) DG(J48):DC(I133) DT(J49):DA(I132) DG(J50):DC(I131) DT(J51):DA(I130) DA(J52):DT(I129) DT(J53):DA(I128) DT(J54):DA(I127) DT(J55):DA(I126) DG(J56):DC(I125) DG(J57):DC(I124) DA(J58):DT(I123) DA(J59):DT(I122) DA(J60):DT(I121) DC(J61):DG(I120) DT(J62):DA(I119) DG(J63):DC(I118) DC(J64):DG(I117) DT(J65):DA(I116) DC(J66):DG(I115) DC(J67):DG(I114) DA(J68):DT(I113) DT(J69):DA(I112) DC(J70):DG(I111) DA(J71):DT(I110) DA(J72):DT(I109) DA(J73):DT(I108) DA(J74):DT(I107) DG(J75):DC(I106) DG(J76):DC(I105) DC(J77):DG(I104) DA(J78):DT(I103) DT(J79):DA(I102) DG(J80):DC(I101) DT(J81):DA(I100) DT(J82):DA(I99) DC(J83):DG(I98) DA(J84):DT(I97) DG(J85):DC(I96) DC(J86):DG(I95) DT(J87):DA(I94) DG(J88):DC(I93) DA(J89):DT(I92) DA(J90):DT(I91) DT(J91):DA(I90) DT(J92):DA(I89) DC(J93):DG(I88) DA(J94):DT(I87) DG(J95):DC(I86) DC(J96):DG(I85) DT(J97):DA(I84) DG(J98):DC(I83) DA(J99):DT(I82) DA(J100):DT(I81) DC(J101):DG(I80) DA(J102):DT(I79) DT(J103):DA(I78) DG(J104):DC(I77) DC(J105):DG(I76) DC(J106):DG(I75) DT(J107):DA(I74) DT(J108):DA(I73) DT(J109):DA(I72) DT(J110):DA(I71) DG(J111):DC(I70) DA(J112):DT(I69) DT(J113):DA(I68) DG(J114):DC(I67) DG(J115):DC(I66) DA(J116):DT(I65) DG(J117):DC(I64) DC(J118):DG(I63) DA(J119):DT(I62) DG(J120):DC(I61) DT(J121):DA(I60) DT(J122):DA(I59) DT(J123):DA(I58) DC(J124):DG(I57) DC(J125):DG(I56) DA(J126):DT(I55) DA(J127):DT(I54) DA(J128):DT(I53) DT(J129):DA(I52) DA(J130):DT(I51) DC(J131):DG(I50) DA(J132):DT(I49) DC(J133):DG(I48) DT(J134):DA(I47) DT(J135):DA(I46) DT(J136):DA(I45) DT(J137):DA(I44) DG(J138):DC(I43) DG(J139):DC(I42) DT(J140):DA(I41) DA(J141):DT(I40) DG(J142):DC(I39) DA(J143):DT(I38) DA(J144):DT(I37) DT(J145):DA(I36) DC(J146):DG(I35) DT(J147):DA(I34) DG(J148):DC(I33) DC(J149):DG(I32) DA(J150):DT(I31) DG(J151):DC(I30) DG(J152):DC(I29) DT(J153):DA(I28) DG(J154):DC(I27) DG(J155):DC(I26) DA(J156):DT(I25) DT(J157):DA(I24) DA(J158):DT(I23) DT(J159):DA(I22) DT(J160):DA(I21) DG(J161):DC(I20) DA(J162):DT(I19) DT(J163):DA(I18) chainB ( 5) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gggaRhRkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >8hah_C:Histone-fold; title=CRYO-EM STRUCTURE OF THE P300 CATALYTIC CORE BOUND TO THE H4K12ACK16AC NUCLEOSOME, CLASS 2 (3.9 ANGSTROM RESOLUTION) organism=? DNA sequence DA(I12):DT(J169) DC(I13):DG(J168) DC(I14):DG(J167) DG(I15):DC(J166) DC(I16):DG(J165) DC(I17):DG(J164) DA(I18):DT(J163) DT(I19):DA(J162) DC(I20):DG(J161) DA(I21):DT(J159) DT(I23):DA(J158) DA(I24):DT(J157) DT(I25):DA(J156) DC(I26):DG(J155) DC(I27):DG(J154) DA(I28):DT(J153) DC(I29):DG(J152) DC(I30):DG(J151) DT(I31):DA(J150) DG(I32):DC(J149) DC(I33):DG(J148) DA(I34):DT(J147) DG(I35):DC(J146) DA(I36):DT(J145) DT(I37):DA(J144) DT(I38):DA(J143) DC(I39):DG(J142) DT(I40):DA(J141) DA(I41):DT(J140) DC(I42):DG(J139) DC(I43):DG(J138) DA(I44):DT(J137) DA(I45):DT(J136) DA(I46):DT(J135) DA(I47):DT(J134) DG(I48):DC(J133) DT(I49):DA(J132) DG(I50):DC(J131) DT(I51):DA(J130) DA(I52):DT(J129) DT(I53):DA(J128) DT(I54):DA(J127) DT(I55):DA(J126) DG(I56):DC(J125) DG(I57):DC(J124) DA(I58):DT(J123) DA(I59):DT(J122) DA(I60):DT(J121) DC(I61):DG(J120) DT(I62):DA(J119) DG(I63):DC(J118) DC(I64):DG(J117) DT(I65):DA(J116) DC(I66):DG(J115) DC(I67):DG(J114) DA(I68):DT(J113) DT(I69):DA(J112) DC(I70):DG(J111) DA(I71):DT(J110) DA(I72):DT(J109) DA(I73):DT(J108) DA(I74):DT(J107) DG(I75):DC(J106) DG(I76):DC(J105) DC(I77):DG(J104) DA(I78):DT(J103) DT(I79):DA(J102) DG(I80):DC(J101) DT(I81):DA(J100) DT(I82):DA(J99) DC(I83):DG(J98) DA(I84):DT(J97) DG(I85):DC(J96) DC(I86):DG(J95) DT(I87):DA(J94) DG(I88):DC(J93) DA(I89):DT(J92) DA(I90):DT(J91) DT(I91):DA(J90) DT(I92):DA(J89) DC(I93):DG(J88) DA(I94):DT(J87) DG(I95):DC(J86) DC(I96):DG(J85) DT(I97):DA(J84) DG(I98):DC(J83) DA(I99):DT(J82) DA(I100):DT(J81) DC(I101):DG(J80) DA(I102):DT(J79) DT(I103):DA(J78) DG(I104):DC(J77) DC(I105):DG(J76) DC(I106):DG(J75) DT(I107):DA(J74) DT(I108):DA(J73) DT(I109):DA(J72) DT(I110):DA(J71) DG(I111):DC(J70) DA(I112):DT(J69) DT(I113):DA(J68) DG(I114):DC(J67) DG(I115):DC(J66) DA(I116):DT(J65) DG(I117):DC(J64) DC(I118):DG(J63) DA(I119):DT(J62) DG(I120):DC(J61) DT(I121):DA(J60) DT(I122):DA(J59) DT(I123):DA(J58) DC(I124):DG(J57) DC(I125):DG(J56) DA(I126):DT(J55) DA(I127):DT(J54) DA(I128):DT(J53) DT(I129):DA(J52) DA(I130):DT(J51) DC(I131):DG(J50) DA(I132):DT(J49) DC(I133):DG(J48) DT(I134):DA(J47) DT(I135):DA(J46) DT(I136):DA(J45) DT(I137):DA(J44) DG(I138):DC(J43) DG(I139):DC(J42) DT(I140):DA(J41) DA(I141):DT(J40) DG(I142):DC(J39) DA(I143):DT(J38) DA(I144):DT(J37) DT(I145):DA(J36) DC(I146):DG(J35) DT(I147):DA(J34) DG(I148):DC(J33) DC(I149):DG(J32) DA(I150):DT(J31) DG(I151):DC(J30) DG(I152):DC(J29) DT(I153):DA(J28) DG(I154):DC(J27) DG(I155):DC(J26) DA(I156):DT(J25) DT(I157):DA(J24) DA(I158):DT(J23) DT(I159):DA(J22) DT(I160):DA(J21) DG(I161):DC(J20) DA(I162):DT(J19) DT(I163):DA(J18) DG(I164):DC(J17) DG(I165):DC(J16) DC(I166):DG(J15) DG(I167):DC(J14) DG(I168):DC(J13) DT(I169):DA(J12) DA(I170):DT(J11) DA(I171):DT(J10) DC(I172):DG(J9) DG(I173):DC(J8) DG(I174):DC(J7) DA(I175):DT(J6) chainC ( 2) LYS13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aKaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk >8hak_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE P300 CATALYTIC CORE BOUND TO THE H4K12ACK16AC NUCLEOSOME, CLASS 4 (4.5 ANGSTROM RESOLUTION) organism=? DNA sequence DT(K19):DA(J162) DC(K20):DG(J161) DA(K21):DT(J160) DA(K22):DT(J159) DT(K23):DA(J158) DA(K24):DT(J157) DT(K25):DA(J156) DC(K26):DG(J155) DC(K27):DG(J154) DA(K28):DT(J153) DC(K29):DG(J152) DC(K30):DG(J151) DT(K31):DA(J150) DG(K32):DC(J149) DC(K33):DG(J148) DA(K34):DT(J147) DG(K35):DC(J146) DA(K36):DT(J145) DT(K37):DA(J144) DT(K38):DA(J143) DC(K39):DG(J142) DT(K40):DA(J141) DA(K41):DT(J140) DC(K42):DG(J139) DC(K43):DG(J138) DA(K44):DT(J137) DA(K45):DT(J136) DA(K46):DT(J135) DA(K47):DT(J134) DG(K48):DC(J133) DT(K49):DA(J132) DG(K50):DC(J131) DT(K51):DA(J130) DA(K52):DT(J129) DT(K53):DA(J128) DT(K54):DA(J127) DT(K55):DA(J126) DG(K56):DC(J125) DG(K57):DC(J124) DA(K58):DT(J123) DA(K59):DT(J122) DA(K60):DT(J121) DC(K61):DG(J120) DT(K62):DA(J119) DG(K63):DC(J118) DC(K64):DG(J117) DT(K65):DA(J116) DC(K66):DG(J115) DC(K67):DG(J114) DA(K68):DT(J113) DT(K69):DA(J112) DC(K70):DG(J111) DA(K71):DT(J110) DA(K72):DT(J109) DA(K73):DT(J108) DA(K74):DT(J107) DG(K75):DC(J106) DG(K76):DC(J105) DC(K77):DG(J104) DA(K78):DT(J103) DT(K79):DA(J102) DG(K80):DC(J101) DT(K81):DA(J100) DT(K82):DA(J99) DC(K83):DG(J98) DA(K84):DT(J97) DG(K85):DC(J96) DC(K86):DG(J95) DT(K87):DA(J94) DG(K88):DC(J93) DA(K89):DT(J92) DA(K90):DT(J91) DT(K91):DA(J90) DT(K92):DA(J89) DC(K93):DG(J88) DA(K94):DT(J87) DG(K95):DC(J86) DC(K96):DG(J85) DT(K97):DA(J84) DG(K98):DC(J83) DA(K99):DT(J82) DA(K100):DT(J81) DC(K101):DG(J80) DA(K102):DT(J79) DT(K103):DA(J78) DG(K104):DC(J77) DC(K105):DG(J76) DC(K106):DG(J75) DT(K107):DA(J74) DT(K108):DA(J73) DT(K109):DA(J72) DT(K110):DA(J71) DG(K111):DC(J70) DA(K112):DT(J69) DT(K113):DA(J68) DG(K114):DC(J67) DG(K115):DC(J66) DG(K117):DC(J64) DC(K118):DG(J63) DA(K119):DT(J62) DG(K120):DC(J61) DT(K121):DA(J60) DT(K122):DA(J59) DT(K123):DA(J58) DC(K124):DG(J57) DC(K125):DG(J56) DA(K126):DT(J55) DA(K127):DT(J54) DA(K128):DT(J53) DT(K129):DA(J52) DA(K130):DT(J51) DC(K131):DG(J50) DA(K132):DT(J49) DC(K133):DG(J48) DT(K134):DA(J47) DT(K135):DA(J46) DT(K136):DA(J45) DT(K137):DA(J44) DG(K138):DC(J43) DG(K139):DC(J42) DT(K140):DA(J41) DA(K141):DT(J40) DG(K142):DC(J39) DA(K143):DT(J38) DT(K145):DA(J36) DC(K146):DG(J35) DT(K147):DA(J34) DG(K148):DC(J33) DC(K149):DG(J32) DA(K150):DT(J31) DG(K151):DC(J30) DG(K152):DC(J29) DT(K153):DA(J28) DG(K155):DC(J27) DA(K156):DT(J25) DA(K158):DA(J24) DT(K159):DA(J22) DT(K160):DA(J21) DG(K161):DC(J20) DA(K162):DT(J19) chainA ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 4) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) LYS75 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 20) PRO32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence hRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/aktRssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkKtriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/gggarhrkvlrdniqgitkPairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/krsrkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreIqtavrlllpgelakhavsegtkavtkytsa >8hak_D:Histone-fold; title=CRYO-EM STRUCTURE OF THE P300 CATALYTIC CORE BOUND TO THE H4K12ACK16AC NUCLEOSOME, CLASS 4 (4.5 ANGSTROM RESOLUTION) organism=? DNA sequence DT(J19):DA(K162) DC(J20):DG(K161) DA(J21):DT(K160) DA(J22):DT(K159) DA(J24):DA(K158) DT(J25):DA(K156) DC(J27):DG(K155) DA(J28):DT(K153) DC(J29):DG(K152) DC(J30):DG(K151) DT(J31):DA(K150) DG(J32):DC(K149) DC(J33):DG(K148) DA(J34):DT(K147) DG(J35):DC(K146) DA(J36):DT(K145) DT(J38):DA(K143) DC(J39):DG(K142) DT(J40):DA(K141) DA(J41):DT(K140) DC(J42):DG(K139) DC(J43):DG(K138) DA(J44):DT(K137) DA(J45):DT(K136) DA(J46):DT(K135) DA(J47):DT(K134) DG(J48):DC(K133) DT(J49):DA(K132) DG(J50):DC(K131) DT(J51):DA(K130) DA(J52):DT(K129) DT(J53):DA(K128) DT(J54):DA(K127) DT(J55):DA(K126) DG(J56):DC(K125) DG(J57):DC(K124) DA(J58):DT(K123) DA(J59):DT(K122) DA(J60):DT(K121) DC(J61):DG(K120) DT(J62):DA(K119) DG(J63):DC(K118) DC(J64):DG(K117) DC(J66):DG(K115) DC(J67):DG(K114) DA(J68):DT(K113) DT(J69):DA(K112) DC(J70):DG(K111) DA(J71):DT(K110) DA(J72):DT(K109) DA(J73):DT(K108) DA(J74):DT(K107) DG(J75):DC(K106) DG(J76):DC(K105) DC(J77):DG(K104) DA(J78):DT(K103) DT(J79):DA(K102) DG(J80):DC(K101) DT(J81):DA(K100) DT(J82):DA(K99) DC(J83):DG(K98) DA(J84):DT(K97) DG(J85):DC(K96) DC(J86):DG(K95) DT(J87):DA(K94) DG(J88):DC(K93) DA(J89):DT(K92) DA(J90):DT(K91) DT(J91):DA(K90) DT(J92):DA(K89) DC(J93):DG(K88) DA(J94):DT(K87) DG(J95):DC(K86) DC(J96):DG(K85) DT(J97):DA(K84) DG(J98):DC(K83) DA(J99):DT(K82) DA(J100):DT(K81) DC(J101):DG(K80) DA(J102):DT(K79) DT(J103):DA(K78) DG(J104):DC(K77) DC(J105):DG(K76) DC(J106):DG(K75) DT(J107):DA(K74) DT(J108):DA(K73) DT(J109):DA(K72) DT(J110):DA(K71) DG(J111):DC(K70) DA(J112):DT(K69) DT(J113):DA(K68) DG(J114):DC(K67) DG(J115):DC(K66) DA(J116):DT(K65) DG(J117):DC(K64) DC(J118):DG(K63) DA(J119):DT(K62) DG(J120):DC(K61) DT(J121):DA(K60) DT(J122):DA(K59) DT(J123):DA(K58) DC(J124):DG(K57) DC(J125):DG(K56) DA(J126):DT(K55) DA(J127):DT(K54) DA(J128):DT(K53) DT(J129):DA(K52) DA(J130):DT(K51) DC(J131):DG(K50) DA(J132):DT(K49) DC(J133):DG(K48) DT(J134):DA(K47) DT(J135):DA(K46) DT(J136):DA(K45) DT(J137):DA(K44) DG(J138):DC(K43) DG(J139):DC(K42) DT(J140):DA(K41) DA(J141):DT(K40) DG(J142):DC(K39) DA(J143):DT(K38) DA(J144):DT(K37) DT(J145):DA(K36) DC(J146):DG(K35) DT(J147):DA(K34) DG(J148):DC(K33) DC(J149):DG(K32) DA(J150):DT(K31) DG(J151):DC(K30) DG(J152):DC(K29) DT(J153):DA(K28) DG(J154):DC(K27) DG(J155):DC(K26) DA(J156):DT(K25) DT(J157):DA(K24) DA(J158):DT(K23) DT(J159):DA(K22) DT(J160):DA(K21) DG(J161):DC(K20) DA(J162):DT(K19) chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8han_K:Bromodomain;FYVE/PHD_zinc_finger; title=CRYO-EM STRUCTURE OF THE CBP CATALYTIC CORE BOUND TO THE H4K12ACK16AC NUCLEOSOME, CLASS 3 organism=? DNA sequence DT(I19):DA(J162) DC(I20):DG(J161) DA(I21):DT(J160) DA(I22):DT(J159) DT(I23):DA(J158) DA(I24):DT(J157) DT(I25):DA(J156) DC(I26):DG(J155) DC(I27):DG(J154) DA(I28):DT(J153) DC(I29):DG(J152) DC(I30):DG(J151) DT(I31):DA(J150) DG(I32):DC(J149) DC(I33):DG(J148) DA(I34):DT(J147) DG(I35):DC(J146) DA(I36):DT(J145) DT(I37):DA(J144) DT(I38):DA(J143) DC(I39):DG(J142) DT(I40):DA(J141) DA(I41):DT(J140) DC(I42):DG(J139) DC(I43):DG(J138) DA(I44):DT(J137) DA(I45):DT(J136) DA(I46):DT(J135) DA(I47):DT(J134) DG(I48):DC(J133) DT(I49):DA(J132) DG(I50):DC(J131) DT(I51):DA(J130) DA(I52):DT(J129) DT(I53):DA(J128) DT(I54):DA(J127) DT(I55):DA(J126) DG(I56):DC(J125) DG(I57):DC(J124) DA(I58):DT(J123) DA(I59):DT(J122) DA(I60):DT(J121) DC(I61):DG(J120) DT(I62):DA(J119) DG(I63):DC(J118) DC(I64):DG(J117) DT(I65):DA(J116) DC(I66):DG(J115) DC(I67):DG(J114) DA(I68):DT(J113) DT(I69):DA(J112) DC(I70):DG(J111) DA(I71):DT(J110) DA(I72):DT(J109) DA(I73):DT(J108) DA(I74):DT(J107) DG(I75):DC(J106) DG(I76):DC(J105) DC(I77):DG(J104) DA(I78):DT(J103) DT(I79):DA(J102) DG(I80):DC(J101) DT(I81):DA(J100) DT(I82):DA(J99) DC(I83):DG(J98) DA(I84):DT(J97) DG(I85):DC(J96) DC(I86):DG(J95) DT(I87):DA(J94) DG(I88):DC(J93) DA(I89):DT(J92) DA(I90):DT(J91) DT(I91):DA(J90) DT(I92):DA(J89) DC(I93):DG(J88) DA(I94):DT(J87) DG(I95):DC(J86) DC(I96):DG(J85) DT(I97):DA(J84) DG(I98):DC(J83) DA(I99):DT(J82) DA(I100):DT(J81) DC(I101):DG(J80) DA(I102):DT(J79) DT(I103):DA(J78) DG(I104):DC(J77) DC(I105):DG(J76) DC(I106):DG(J75) DT(I107):DA(J74) DT(I108):DA(J73) DT(I109):DA(J72) DT(I110):DA(J71) DG(I111):DC(J70) DA(I112):DT(J69) DT(I113):DA(J68) DG(I114):DC(J67) DG(I115):DC(J66) DA(I116):DT(J65) DG(I117):DC(J64) DC(I118):DG(J63) DA(I119):DT(J62) DG(I120):DC(J61) DT(I121):DA(J60) DT(I122):DA(J59) DT(I123):DA(J58) DC(I124):DG(J57) DC(I125):DG(J56) DA(I126):DT(J55) DA(I127):DT(J54) DA(I128):DT(J53) DT(I129):DA(J52) DA(I130):DT(J51) DC(I131):DG(J50) DA(I132):DT(J49) DC(I133):DG(J48) DT(I134):DA(J47) DT(I135):DA(J46) DT(I136):DA(J45) DT(I137):DA(J44) DG(I138):DC(J43) DG(I139):DC(J42) DT(I140):DA(J41) DA(I141):DT(J40) DG(I142):DC(J39) DA(I143):DT(J38) DA(I144):DT(J37) DT(I145):DA(J36) DC(I146):DG(J35) DT(I147):DA(J34) DG(I148):DC(J33) DC(I149):DG(J32) DA(I150):DT(J31) DG(I151):DC(J30) DG(I152):DC(J29) DT(I153):DA(J28) DG(I154):DC(J27) DG(I155):DC(J26) DA(I156):DT(J25) DT(I157):DA(J24) DA(I158):DT(J23) DT(I159):DA(J22) DT(I160):DA(J21) DG(I161):DC(J20) DA(I162):DT(J19) DT(I163):DA(J18) DG(I164):DC(J17) DG(I165):DC(J16) chainK (375) ARG1498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eelrqalmptlealyrqdpeslpfrqpvdpqllgipdyfdivknpmdlstikrkldtgqyqepwqyvddvwlmfnnawlynrktsrvykfcsklaevfeqeidpvmqslgyccgrkyefspqtlccygkqlctiprdaayysyqnryhfcekcftfekkkndtldpepfvdckecgrkmhqicvlhydiiwpsgfvcdnclkktgrprkenkfsakrlqttrlgnhledrvnkflrrqnhpeagevfvrvvassdktvevkmsesfpyrtkalfafeeidgvdvcffgmhvqeygsdcpppntrrvyisyldsihffrprclrtavyheiligyleyvkklgyvtghiwacppsegddyifhchppdqkipkpkRlqewykkmldkafaeriihdykdifkqatedrltsakelpyfegdfwpnvleesikeklyatmekhkevffvihlhpdpllscdlmdgrdafltlardkhwefsslrrskwstlcmlvelhtqgq >8hbm_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL BASIS OF THE FARNESOID X RECEPTOR/RETINOID X RECEPTOR HETERODIMER ON INVERTED REPEAT DNA organism=? DNA sequence DC(D2):DG(C18) DG(D3):DC(C17) DA(D4):DT(C16) DG(D5):DC(C15) DG(D6):DC(C14) DT(D7):DA(C13) DC(D8):DG(C12) DA(D9):DT(C11) DT(D10):DA(C10) DT(D11):DA(C9) DG(D12):DC(C8) DA(D13):DT(C7) DC(D14):DG(C6) DC(D15):DG(C5) DT(D16):DA(C4) DC(D17):DG(C3) DG(D18):DC(C2) chainA ( 23) GLU153 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 ( 26) LYS156 0 0 0 0 0 0 0 0 0 0 0 0 1 7 1 0 0 ( 30) LYS160 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 ( 31) ARG161 0 0 0 0 0 0 0 0 0 13 12 0 0 0 0 0 0 chainB ( 22) GLU145 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG152 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG153 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 ( 54) ARG177 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence tkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeer/delcvvcgdrasgyhynaltcEgckgffRRsitknavykcknggncvmdmymrRkcqecrlrkckemgmlaec >8hbm_B:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL BASIS OF THE FARNESOID X RECEPTOR/RETINOID X RECEPTOR HETERODIMER ON INVERTED REPEAT DNA organism=? DNA sequence DC(D2):DG(C18) DG(D3):DC(C17) DA(D4):DT(C16) DG(D5):DC(C15) DG(D6):DC(C14) DT(D7):DA(C13) DC(D8):DG(C12) DA(D9):DT(C11) DT(D10):DA(C10) DT(D11):DA(C9) DG(D12):DC(C8) DA(D13):DT(C7) DC(D14):DG(C6) DC(D15):DG(C5) DT(D16):DA(C4) DC(D17):DG(C3) DG(D18):DC(C2) chainB ( 22) GLU145 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG152 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG153 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 ( 54) ARG177 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 prot.sequence delcvvcgdrasgyhynaltcEgckgffRRsitknavykcknggncvmdmymrRkcqecrlrkckemgmlaec >8hbm_EF:Glucocorticoid_receptor-like_DNA-binding_domain; title=STRUCTURAL BASIS OF THE FARNESOID X RECEPTOR/RETINOID X RECEPTOR HETERODIMER ON INVERTED REPEAT DNA organism=? DNA sequence DC(G2):DG(H18) DG(G3):DC(H17) DA(G4):DT(H16) DG(G5):DC(H15) DG(G6):DC(H14) DT(G7):DA(H13) DC(G8):DG(H12) DA(G9):DT(H11) DA(G10):DT(H10) DT(G11):DA(H9) DG(G12):DC(H8) DA(G13):DT(H7) DC(G14):DG(H6) DC(G15):DG(H5) DT(G16):DA(H4) DC(G17):DG(H3) DG(G18):DC(H2) chainE ( 21) GLU153 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) ARG161 0 0 0 0 0 0 9 9 0 0 0 0 0 0 0 0 0 chainF ( 22) GLU145 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 ( 25) LYS148 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 prot.sequence khicaicgdrsgkhygvyscEgckgffkRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeer/delcvvcgdrasgyhynaltcEgcKgffrsitknavykcknggncvmdmymrrkcqecrlrkckemgmlaec >8hg1_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=THE STRUCTURE OF MPXV POLYMERASE HOLOENZYME IN REPLICATING STATE organism=? DNA sequence DA(T3):TTP(A1102) DG(T4):DC(P25) DC(T5):DG(P24) DA(T6):DT(P23) DA(T7):DT(P22) DT(T8):DA(P21) DT(T9):DA(P20) DC(T10):DG(P19) DG(T11):DC(P18) DT(T12):DA(P17) DA(T13):DT(P16) DA(T14):DT(P15) DT(T15):DA(P14) DC(T16):DG(P13) DA(T17):DT(P12) chainA (550) ASP549 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (552) ASN551 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (553) SER552 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (554) LEU553 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (635) ARG634 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (662) LYS661 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (663) ILE662 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (666) ASN665 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (667) SER666 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (754) ASP753 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (805) LYS804 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 (833) ARG832 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 prot.sequence smdvrcinwfeshgenrflylksrcrngetvfirfphyfyyvvtdeiyqslspppfnarpmgkmrtididetisynldikdrkcsvadmwlieepkkrsiqnatmdeffniswfyisngispdgcysldeqyltkinngcyhcddprncfakeiprfdiprsylfldiechfdkkfpsvfinpishtsycyidlsgkrllftlineemlteqeiqeavdrgclriqslmemdyerelvlcseivllriakqlleltfdyvvtfnghnfdlryitnrlelltgekiifrspdkkeavhlciyernqsshkgvcgmanttfhvnnnngtiffdlysfiqksekldsykldsisknafscmgkvlnrgvremtfigddttdakgkadtfakvlttgnyvtvdediickvirkdilengfkvvlscptlpndiyklsfgkddidlaqmykdynlnialdmarycihdaclcqylweyygvetktdagaatyvlpqsmvfeyrastiikgpllkllletktilvrsetkqkfpyeggkvfapkqkmfsnnvlifdynslypnvcifgnlspetlvgvvvstnrleeeinnqlllqkypppryitvhceprlpnliseiaifdrsiegtiprllrtflaerarykkmlkqatsstekaiydsmqytykIvaNSvyglmgfrnsalysyasaksctsigrrmilylesvlngaelsngmlrfantlsnpfymddrdinpivktslpidyrfrfrsvygdtdsvfteidsqdvdksieiakelerlinsrvlfnnfkiefeavyknlimqskKkyttmkysassnsksvperinkgtsetRrdvskfhknmiktyktrlsemlsegrmnsnqvcidilrsletdlrsefdsrssplelfmlsrmhhsnyksadnpnmylvteynknnpetielgeryyfayicpanvpwtkklvniktyetiidrsfklgsnqrifyevyfkrltseivnlldnkvlcisffqrmfgsrptfy >8hg1_B:Uracil-DNA_glycosylase-like; title=THE STRUCTURE OF MPXV POLYMERASE HOLOENZYME IN REPLICATING STATE organism=? DNA sequence DC(T-4) DG(T-3) DA(T-2) DA(T-1) DT(T0) DT(T1) DA(T2) DA(T3) DG(T4) DC(T5) DA(T6) DA(T7) DT(T8) DT(T9) DC(T10) DG(T11) DT(T12) DA(T13) DA(T14) DT(T15) DC(T16) DA(T17) chainB (161) THR161 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnsvtishapytityhddwepvmsqlvefynevaswllrdetspipdkffiqlkqplrnkrvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvipwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgkTdfsniraklespvttivgyhpaardhqfekdrsfeiinvlleldnktpinwaqgfiy >8hg1_BC:DNA/RNA_polymerases;Ribonuclease_H-like;Uracil-DNA_glycosylase-like; title=THE STRUCTURE OF MPXV POLYMERASE HOLOENZYME IN REPLICATING STATE organism=? DNA sequence DC(T-4) DG(T-3) DA(T-2) DA(T-1) DT(T0) DT(T1) DA(T2) DA(T3) DG(T4) DC(T5) DA(T6) DA(T7) DT(T8) DT(T9) DC(T10) DG(T11) DT(T12) DA(T13) DA(T14) DT(T15) DC(T16) DA(T17) chainB (161) THR161 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC prot.sequence mnsvtishapytityhddwepvmsqlvefynevaswllrdetspipdkffiqlkqplrnkrvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvipwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgkTdfsniraklespvttivgyhpaardhqfekdrsfeiinvlleldnktpinwaqgfiy/tssadltnlkellslykslrfsdsvaiekynslvewgtstywkigvqkvtnvetsisdyydevknkpfnidpgyyiflpvyfgsvfiyskgknmvelgsgnsfqipdeirsacnkvldsdngidflrfvllnnrwimedaiskyqspvnifklaseyglnIpnyleieieedtlfddelysimersfddtfpkisisyiklgelkrqvvdffkfsfmyiesikvdrigdnifipsvitksgkkilvkdvdhlirskvrehtfvkvkkkntfsilydydtrgevikriidtigrdyyvngkyfskvgiaglkqltnkldinecatvdelvdeinksgtvkrkiknqsvfdlsreclgypeadfitlvnnmrfkienckvvnfnientnclnnpsietiygnfnqfvsifntvtdvkkrlf >8hhl_A: title=CRYO-EM STRUCTURE OF THE CAS12M2-CRRNA-TARGET DNA FULL R-LOOP COMPLEX organism=? DNA sequence DT(D-10):DA(C27) DG(D-9):DC(C26) DT(D-8):DA(C25) DC(D-7):DG(C24) DT(D-6):DA(C23) DA(D-5):DT(C22) DT(D-4):DA(C21) DT(D-3):DA(C20) DT(D-2):DA(C19) DG(D-1):DC(C18) DG(D0):DC(C17) DG(D1):DC(C16) DA(D2):DT(C15) DG(D3):DC(C14) DA(D4):DT(C13) DT(D5):DA(C12) DG(D6):DC(C11) DA(D7):DT(C10) DG(D8):DC(C9) DG(D9):DC(C8) DT(D10):DA(C7) DG(D11):DC(C6) DC(D12):DG(C5) DG(D13):DC(C4) DC(D14):DG(C3) DG(D15):DC(C2) DT(D16):DA(C1) DG(D17):DC(C0) DG(D18):DC(C-1) DC(D19):DG(C-2) DA(D20):DT(C-3) chainA ( 4) MET4 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) LYS47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) ILE82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 85) ARG85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 ( 98) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (108) ARG108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (115) ILE115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (116) ALA116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (119) LYS119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) LYS127 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) SER130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (141) TYR141 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) TRP152 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) ASN156 0 0 0 0 0 0 0 0 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (160) ASP160 0 0 0 0 0 0 0 0 0 2 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) LYS163 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) THR164 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG168 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ALA174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) LYS177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (178) PRO178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 15 0 0 0 0 0 0 0 0 0 0 0 (180) THR180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) GLN195 0 0 0 0 0 0 0 0 8 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) GLN197 0 0 0 0 0 0 10 10 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) GLN199 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) THR299 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) TRP320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (486) ASP486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (487) THR487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (491) GLU491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 (492) LEU492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 (494) ALA494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (495) ARG495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 2 0 0 0 0 0 0 (496) ALA496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (498) GLU498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (499) ARG499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 0 (502) LEU502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 (503) PRO503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 (506) VAL506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (507) GLN507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 (510) ILE510 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (543) ALA543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (563) LEU563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 prot.sequence mttMtvhtmgvhykwqipevlrqqlwlahnlredlvslqlaydddlKaiwssypdvaqaedtmaaaeadavalservkqarIeaRskkisteltqqlRdakkrlkdaRqarrdaIAvvKddaaerrKarSdqlaadqkalYgqycrdgdlyWasfNtvlDhhKTavkRiaaqRAsgKPaTlrhhrfdgsgtiavQlQrQagapprtpmvladeagkyrnvlhipgwtdpdvweqmtrsqcrqsgrvtvrmrcgstdgqpqwidlpvqvhrwlpadaditgaelvvtrvagiyraklcvTarigdtepvtsgptvalhlgWrsteegtavatwrsdapldipfglrtvmrvdaagtsgiivvpatierrltrteniassrslaldalrdkvvgwlsdndaptyrdapleaatvkqwkspqrfaslahawkdngteisdilwawfsldrkqwaqqengrrkalghrddlyrqiaavisdqaghvlvdDTsvaELsARAmERteLPteVQqkIdrrrdhaapgglrasvvaamtrdgvpvtivaaAdftrthsrcghvnpaddryLsnpvrcdgcgamydqdrsfvtlmlraata >8hhm_A: title=CRYO-EM STRUCTURE OF THE CAS12M2-CRRNA-TARGET DNA TERNARY COMPLEX INTERMEDIATE STATE organism=? DNA sequence DG(D23):DC(C26) DT(D24):DA(C25) DC(D25):DG(C24) DT(D26):DA(C23) DA(D27):DT(C22) DT(D28):DA(C21) DT(D29):DA(C20) DT(D30):DA(C19) DG(D31):DC(C18) chainA ( 73) TYR141 0 0 0 0 0 0 3 5 0 ( 84) TRP152 0 0 0 0 0 6 7 0 0 ( 88) ASN156 0 0 0 0 0 0 0 8 3 (127) GLN195 0 0 0 0 0 0 0 9 3 (129) GLN197 0 0 0 0 0 10 9 7 0 prot.sequence mttmtvhtmgvhykwqipevlrqqlwlahnlredlvslqlaydddlkaiwssdaaerrkarsdqlaadqkalYgqycrdgdlyWasfNtvldhhktavkriaaqrasgkpatlrhhrfdgsgtiavQlQrqagapprtpmvladeagkyrnvlhipgwtdpdvweqmtrsqcrqsgrvtvrmrcgstdgqpqwidlpvqvhrwlpadaditgaelvvtrvagiyraklcvtarigdtepvtsgptvalhlgwrsteegtavatwrsdapldipfglrtvmrvdaagtsgiivvpatierrltrteniassrslaldalrdkvvgwlsdndaptyrdapleaatvkqwkspqrfaslahawkdngteisdilwawfsldrkqwaqqengrrkalghrddlyrqiaavisdqaghvlvddtsvaelsarameqqkidrrrdhaapgglrasvvaamtrdgvpvtivaaadftrthsrcghvnpaddrylsnpvrcdgcgamydqdrsfvtlmlraata >8hi1_ABCDEF: title=STREPTOCOCCUS THERMOPHILUS CAS1-CAS2- PRESPACER TERNARY COMPLEX organism=? DNA sequence DA(H1):DT(G23) DT(H2):DA(G22) DT(H3):DA(G21) DT(H4):DA(G20) DA(H5):DT(G19) DC(H6):DG(G18) DT(H7):DA(G17) DA(H8):DT(G16) DC(H9):DG(G15) DT(H10):DA(G14) DC(H11):DG(G13) DG(H12):DC(G12) DT(H13):DA(G11) DT(H14):DA(G10) DC(H15):DG(G9) DT(H16):DA(G8) DG(H17):DC(G7) DG(H18):DC(G6) DT(H19):DA(G5) DG(H20):DC(G4) DT(H21):DA(G3) DT(H22):DA(G2) DT(H23):DA(G1) chainA ( 7) HIS29 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) PRO62 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 8) HIS29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 ( 41) PRO62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 ( 65) GLU86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainD chainE chainF prot.sequence sfiyveHakinrvdsaitvldsrgtvripaamigvlllgPgtdishraveligdtgtsmvwvgergvrqyahgrslahstkflekqaklvsnsrlrlavarkmyqmrfpdedvsamtmqqlrgregarvrrvyrlqsekyqvswtkreynpddfeggdivnqalsaanvalyglvhsivialgaspglgfvhtghdlsfiydiadlykaeltiplafeiaanfteiddigkiarqkvrdsfvdgklivrivqdiqylfdldddeellvdtlslwddkdmlvkhgvsyke/kngakkTslrelpkisdrvsfiyvehakinrvdsaitvlDsrgtvripaamigvlllgpgtdishraveligdtgtsmvwvgergvrqyahgrslahstkflekqaklvsnsrlrlavarkmyqmrfpdedvsamtmivnqalsaanvalyglvhsivialgaspglgfvhtghdlsfiydiadlykaeltiplafeiaanftkiarqkvrdsfvdgklivrivqdiqylfd/vsfiyveHakinrvdsaitvldsrgtvripaamigvlllgPgtdishraveligdtgtsmvwvgErgvrqyahgrslahstkflekqaklvsnsrlrlavarkmyqmrfpdedvsamtmqqlrgregarvrrvyrlqsekyqvswtkreynpddfeggdivnqalsaanvalyglvhsivialgaspglgfvhtghdlsfiydiadlykaeltiplafeiaanfteiddigkiarqkvrdsfvdgklivrivqdiqylfdldddeellvdtlslwddkdmlvkhg/kngakktSlrelpkisdrvsfiyvehakinrvdsaitvldSrgtvripaamigvlllgpgtdisHraveligdtgtsmvwvgergvrqyahgrslahstkflekqaklvsnsrlrlavarkmyqmrfpdedvsamtmqqlrgregarvrivnqalsaanvalyglvhsivialgaspglgfvhtghdlsfiydiadlykaeltiplafeiaanftkiarqkvrdsfvdgklivrivqdiqylfd/pftvvtlKsvppslrgdltkwmqeiaigvyvgnfnsrireKlwnriqanvgegeatisyyyrneIgyqfdminsqksvvdfdgiplvlipns/mpftvvtLksvppslrgdltkwmqeiaigvyvgnfnsrirEklwnriqanvgegeatisyyyrnEigyqfdminsqksvvdfdgiplvlipn >8hi1_C: title=STREPTOCOCCUS THERMOPHILUS CAS1-CAS2- PRESPACER TERNARY COMPLEX organism=? DNA sequence DA(G1):DT(H23) DA(G2):DT(H22) DA(G3):DT(H21) DC(G4):DG(H20) DA(G5):DT(H19) DC(G6):DG(H18) DC(G7):DG(H17) DA(G8):DT(H16) DG(G9):DC(H15) DA(G10):DT(H14) DA(G11):DT(H13) DC(G12):DG(H12) DG(G13):DC(H11) DA(G14):DT(H10) DG(G15):DC(H9) DT(G16):DA(H8) DA(G17):DT(H7) DG(G18):DC(H6) DT(G19):DA(H5) DA(G20):DT(H4) DA(G21):DT(H3) DA(G22):DT(H2) DT(G23):DA(H1) chainC ( 8) HIS29 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) PRO62 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) GLU86 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vsfiyveHakinrvdsaitvldsrgtvripaamigvlllgPgtdishraveligdtgtsmvwvgErgvrqyahgrslahstkflekqaklvsnsrlrlavarkmyqmrfpdedvsamtmqqlrgregarvrrvyrlqsekyqvswtkreynpddfeggdivnqalsaanvalyglvhsivialgaspglgfvhtghdlsfiydiadlykaeltiplafeiaanfteiddigkiarqkvrdsfvdgklivrivqdiqylfdldddeellvdtlslwddkdmlvkhg >8hig_AB: title=CO-CRYSTAL STRUCTURE OF C-TERMINAL DNA BINDING DOMAIN OF SACCHAROPOLYSPORA ERYTHRAEA GLNR IN COMPLEX WITH ITS COGNATE PROMOTER DNA organism=Saccharopolyspora erythraea NRRL 2338 DNA sequence DA(D1):DT(C20) DC(D2):DG(C19) DG(D3):DC(C18) DT(D4):DA(C17) DA(D5):DT(C16) DA(D6):DT(C15) DC(D7):DG(C14) DA(D8):DT(C13) DT(D9):DA(C12) DC(D10):DG(C11) DG(D11):DC(C10) DC(D12):DG(C9) DG(D13):DC(C8) DG(D14):DC(C7) DT(D15):DA(C6) DA(D16):DT(C5) DA(D17):DT(C4) DC(D18):DG(C3) DA(D19):DT(C2) DC(D20):DG(C1) chainA ( 63) ARG186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 20 0 ( 64) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 66) ASP189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 67) VAL190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 2 0 0 0 ( 70) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 71) ARG194 0 0 0 0 0 0 0 0 0 0 0 0 9 12 3 0 0 0 0 0 chainB ( 56) ARG186 0 0 0 0 0 6 11 18 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) THR187 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASP189 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) VAL190 0 0 0 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG194 0 4 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG211 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 prot.sequence gdgmltvgdlvieestytarlkgraleltykefellkylaqhagrvftraqllqevwgyggtRTvDVhvRRlraklgpeydsmigtvrnvgykfvrps/vgdlvieestytarlkaleltykefellkylaqhagrvftraqllqevwgydfgtRTvDVhvrRlraklgpeydsmigtvRnvgykfvrp >8hig_B:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CO-CRYSTAL STRUCTURE OF C-TERMINAL DNA BINDING DOMAIN OF SACCHAROPOLYSPORA ERYTHRAEA GLNR IN COMPLEX WITH ITS COGNATE PROMOTER DNA organism=Saccharopolyspora erythraea NRRL 2338 DNA sequence DA(D1):DT(C20) DC(D2):DG(C19) DG(D3):DC(C18) DT(D4):DA(C17) DA(D5):DT(C16) DA(D6):DT(C15) DC(D7):DG(C14) DA(D8):DT(C13) DT(D9):DA(C12) DC(D10):DG(C11) DG(D11):DC(C10) DC(D12):DG(C9) DG(D13):DC(C8) DG(D14):DC(C7) DT(D15):DA(C6) DA(D16):DT(C5) DA(D17):DT(C4) DC(D18):DG(C3) DA(D19):DT(C2) DC(D20):DG(C1) chainB ( 56) ARG186 0 0 0 0 0 6 11 18 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) THR187 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ASP189 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) VAL190 0 0 0 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG194 0 4 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ARG211 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 prot.sequence vgdlvieestytarlkaleltykefellkylaqhagrvftraqllqevwgydfgtRTvDVhvrRlraklgpeydsmigtvRnvgykfvrp >8hih_CDFGNOPQ:C-terminal_effector_domain_of_the_bipartite_response_regulators;CheY-like; title=CRYO-EM STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX WITH TRANSCRIPTION FACTOR GLNR organism=? DNA sequence DC(K1):DG(L77) DT(K2):DA(L76) DT(K3):DA(L75) DC(K4):DG(L74) DG(K5):DC(L73) DT(K6):DA(L72) DC(K7):DG(L71) DA(K8):DT(L70) DC(K9):DG(L69) DG(K10):DC(L68) DG(K11):DC(L67) DC(K12):DG(L66) DG(K13):DC(L65) DG(K14):DC(L64) DC(K15):DG(L63) DG(K16):DC(L62) DA(K17):DT(L61) DA(K18):DT(L60) DA(K19):DT(L59) DC(K20):DG(L58) DA(K21):DT(L57) DA(K22):DT(L56) DC(K23):DG(L55) DG(K24):DC(L54) DA(K25):DT(L53) DG(K26):DC(L52) DG(K27):DC(L51) DG(K28):DC(L50) DG(K29):DC(L49) DC(K30):DG(L48) DT(K31):DA(L47) DT(K32):DA(L46) DC(K33):DG(L45) DC(K34):DG(L44) DA(K35):DT(L43) DC(K36):DG(L42) DC(K37):DG(L41) DG(K38):DC(L40) DA(K39):DT(L39) DA(K40):DT(L38) DA(K41):DT(L37) DC(K42):DG(L36) DC(K43):DG(L35) DG(K44):DC(L34) DC(K45):DG(L33) DG(K46):DC(L32) DC(K47):DG(L31) DT(K48):DA(L30) DG(K49):DC(L29) DC(K50):DG(L28) DG(K51):DC(L27) DT(K52):DA(L26) DT(K53):DA(L25) DA(K54):DA(L24) DT(K55):DT(L23) DA(K56):DA(L22) DA(K57):DA(L21) DT(K58):DT(L20) DG(K59):DG(L19) DG(K60):DG(L18) DG(K61):DG(L17) DA(K62):DA(L16) DG(K63):DG(L15) DC(K64):DC(L14) DT(K65):DT(L13) DG(K66):DG(L12) DT(K67):DA(L11) DC(K68):DG(L10) DA(K69):DT(L9) DC(K70):DG(L8) DG(K71):DC(L7) DG(K72):DC(L6) DA(K73):DT(L5) DT(K74):DA(L4) DG(K75):DC(L3) DC(K76):DG(L2) DA(K77):DT(L1) chainC (152) ARG181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (174) LYS203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (179) ARG208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ALA210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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nsvpgapnrvsfaklreplevpglldvqtdsfewligsprwresaaergdvnpvggleevlyelspiedfsgsmslsfsdprfddvkapvdeckdkdmtyaaplfvtaefinnntgeiksqtvfmgdfpmmtekgtfiingtervvvsqlvRspgvyfdetidkstdktlhsvKvipsRgAWlefdvdkrdtvgvriDrkrrqpvtvllkalgwtseqiverfgfseimrstlekdntvgtdealldiyrklrpgEpptkesaqtllenlffkekRydlarvgrykvnkklglhvgepitsstlteedvvatieylvrlhegqttmtvpggvevpvetddidhfgnrrlrtvgeliqnqirvgmsrmervvrermttqdveaitpqtliniRpvvaaikeffgtsqlsqfmdqnnplsglthkrrlsalgpggLsrERaglevrdvhpshygrmcpietpegpnigligslsvyarvnpfgfietpyrkvvdgvvsdeivyltadeedrhvvaqanspidadgrfveprvlvrrkageveyvpssevdymdvsprqmvsvatamipflehddanralmganmqrqavplvrseaplvgtgmelraaidagdvvvaeesgvieevsadyitvmhdngtrrtyrmrkfarsnhgtcanqcpivdagdrveagqviadgpctddgemalgknllvaimpweghnyedaiilsnrlveedvltsihieeheidardtklgaeeitrdipnisdevladldergivrigaevrdgdilvgkvtpkgeteltpeerllraifgekarevrdtslkvphgesgkvigirvfsrededelpagvnelvrvyvaqkrkisdgdklagrhgnkgvigkilpvedmpfladgtpvdiilnthgvprrmnigqilethlgwcahsgwkvdaakgvpdwaarlpdelleaqpnaivstpvfdgaqeaelqgllsctlpnrdgdvlvdadgkamlfdgrsgepfpypvtvgymyimklhhlvddkiharstgpysmitqqplggkaqfggqrfgemecwamqaygaaytlqelltiksddtvgrvkvyeaivkgenipepgipesfkvllkelqslclnvevlss/mldvnffdelriglataedirqwsygevkkpetinyrtlkpekdglfcekifgptrdwecycgkykrvrfkgiicercgvevtrakvrrermghielaapvthiwyfkgvpsrlgylldlapkdlekiiyfaayvitsvdeemrhnelstleaemaverkavedqrdgelearaqkleadlaeleaegakadarrkvrdggeremrqirdraqreldrlediwstftklapkqlivdenlyrelvdrygeyftgamgaesiqklienfdidaeaeslrdvirngkgQKklralkrlkvvaafqqsgnspmgmvldavpvippelrpmvqLDggRfatsdlndlyrrvinrnnrlkrlidlgapeiivnnekrmlqesvdalfdngrrgRpvtgpgnrplkslsdllkgkqgrfrqnllgkrvdysgRsvivvgpqlklhqcglpklmalelfkpfvmkrlvdlnhaqniksakrmverqrpqvwdvleeviaehpvllnrAPtlhrlgiqafepmlvegkaiqlhplvceafnadfdgdqmavhlplsaeaqaearilmlssnnilspasgrplamprldmvtglyylttevpgdtgeyqpasgdhpetgvysspaeaimaadrgvlsvrakikvrltqlrppveieaelfghsgwqpgdawmaettlgrvmfnellplgypfvnkqmhkkvqaaiindlaerypmivvaqtvdklkdagfywatrsgvtvsmadvlvpprkkeildhyeeradkvekqfqrgalnhdernealveiwkeatdevgqalrehypddnpiitivdsgatgnftqtrtlagmkglvtnpkgefiprpvkssfregltvleyfinthgarkgladtAlrTAdsgyltrrlvdvsqdvivrehdcqtergivvelaerapdgtlirdpyietsayartlgtdavdeagnvivergqdlgdpeidallaagitqvkvrsvltcatstgvcatcygrsmatgklvdigeavgivaaqsigepgtqltmrtditgglprvqelfearvprgkapiadvtgrvrledgerfykitivpddggeevvydkiskrqrlrvfkrvlsdgdhvevgqqlmegsadphevlrvqgprevqihlvrevqevyraqgvsihdkhievivrqmlrrvtiidsgsteflpgslidraefeaenrrvvaeggepaagrpvlmgitkaslatdswlsaasfqettrvltdaaincrsdklnglkenviigklipagtginryrniavqpteearaaa/edesealrqarkdaeltasaDsVRayLkqIgkvaLlnaeeevelakrieaglyatqlmtelsergeklpaaqrrdmmwicrdgdraknhlleaNlRLvvslakrytgRgmaFldliqegnlgliravekFDytKgYkfSTYaTWWiRQaitRamadqaRtiripVHmvEviNklgriqRellqdlgreptpeelakemditpekvleiqqyarEpIsldQtigDEgDsqlgdFiedseavvavdavsftllqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvtrerirqiesktmsklrhpsrsqvlrdyl/alpiddldltvrsynclkregvhtvgelvartesdlldiRNfgqksidevkiklhql/mlelllltselypdpvlpalsllphtvrtapaeasslleagnadavlvdarndlssgrglcrllsstgrsipvlavvsegglvavsadwgldeilllstgpaeidarlrlvvgdqeslgkvslgelvidegtytarlrgrpldltykefellkylaqhagrvftraqllhevwgydffggtRTvDVhvrRlraklgpehealigtvrnvgykavrpa/mlelllltselypdpvlpalsllphtvrtapaeasslleagnadavlvdarndlssgrglcrllsstgrsipvlavvsegglvavsadwgldeilllstgpaeidarlrlvvgdqeslgkvslgelvidegtytarlrgrpldltykefellkylaqhagrvftraqllhevwgydffggtRTvDVHvRRlraklgpehealigtvrnvgykavrpa/mlelllltselypdpvlpalsllphtvrtapaeasslleagnadavlvdarndlssgrglcrllsstgrsipvlavvsegglvavsadwgldeilllstgpaeidarlrlvvglgkvslgelvidegtytarlrgrpldltykefellkylaqhagrvftraqllhevwgydffggtRtvdvhvRrlraklgpehealigtvRnvgykavrpa/mlelllltselypdpvlpalsllphtvrtapaeasslleagnadavlvdarndlssgrglcrllsstgrsipvlavvsegglvavsadwgldeilllstgpaeidarlrlvvglgkvslgelvidegtytarlrgrpldltykefellkylaqhagrvftraqllhevwgydffggtRTvDVhvRRlraklgpehealigtvRnvgykavrpa >8hih_Q:C-terminal_effector_domain_of_the_bipartite_response_regulators;CheY-like; title=CRYO-EM STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX WITH TRANSCRIPTION FACTOR GLNR organism=? DNA sequence DC(K1):DG(L77) DT(K2):DA(L76) DT(K3):DA(L75) DC(K4):DG(L74) DG(K5):DC(L73) DT(K6):DA(L72) DC(K7):DG(L71) DA(K8):DT(L70) DC(K9):DG(L69) DG(K10):DC(L68) DG(K11):DC(L67) DC(K12):DG(L66) DG(K13):DC(L65) DG(K14):DC(L64) DC(K15):DG(L63) DG(K16):DC(L62) DA(K17):DT(L61) DA(K18):DT(L60) DA(K19):DT(L59) DC(K20):DG(L58) DA(K21):DT(L57) DA(K22):DT(L56) DC(K23):DG(L55) DG(K24):DC(L54) DA(K25):DT(L53) DG(K26):DC(L52) DG(K27):DC(L51) DG(K28):DC(L50) DG(K29):DC(L49) DC(K30):DG(L48) DT(K31):DA(L47) DT(K32):DA(L46) DC(K33):DG(L45) DC(K34):DG(L44) DA(K35):DT(L43) DC(K36):DG(L42) DC(K37):DG(L41) DG(K38):DC(L40) DA(K39):DT(L39) DA(K40):DT(L38) DA(K41):DT(L37) DC(K42):DG(L36) DC(K43):DG(L35) DG(K44):DC(L34) DC(K45):DG(L33) DG(K46):DC(L32) DC(K47):DG(L31) DT(K48):DA(L30) DG(K49):DC(L29) DC(K50):DG(L28) DG(K51):DC(L27) DT(K52):DA(L26) DT(K53):DA(L25) DA(K54):DA(L24) DT(K55):DT(L23) DA(K56):DA(L22) DA(K57):DA(L21) DT(K58):DT(L20) DG(K59):DG(L19) DG(K60):DG(L18) DG(K61):DG(L17) DA(K62):DA(L16) DG(K63):DG(L15) DC(K64):DC(L14) DT(K65):DT(L13) DG(K66):DG(L12) DT(K67):DA(L11) DC(K68):DG(L10) DA(K69):DT(L9) DC(K70):DG(L8) DG(K71):DC(L7) DG(K72):DC(L6) DA(K73):DT(L5) DT(K74):DA(L4) DG(K75):DC(L3) DC(K76):DG(L2) DA(K77):DT(L1) chainQ (178) ARG188 0 0 0 0 0 0 0 0 2 16 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (179) THR189 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) ASP191 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) VAL192 0 0 0 0 0 0 3 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG195 0 0 0 0 0 0 0 9 15 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ARG196 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ARG213 0 0 0 0 0 0 0 0 0 0 0 0 1 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mlelllltselypdpvlpalsllphtvrtapaeasslleagnadavlvdarndlssgrglcrllsstgrsipvlavvsegglvavsadwgldeilllstgpaeidarlrlvvglgkvslgelvidegtytarlrgrpldltykefellkylaqhagrvftraqllhevwgydffggtRTvDVhvRRlraklgpehealigtvRnvgykavrpa >8him_AB:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Eukaryotic_RPB5_N-terminal_domain;RPB5-like_RNA_polymerase_subunit; title=A CRYO-EM STRUCTURE OF B. OLERACEA RNA POLYMERASE V ELONGATION COMPLEX AT 2.73 ANGSTROM organism=? DNA sequence DC(T4):DG(N31) DT(T5):DA(N30) DC(T6):DG(N29) DA(T7):DT(N28) DA(T8):DT(N27) DG(T9):DC(N26) DT(T10):DA(N25) DA(T11):DT(N24) DT(T12):DA(N23) DC(T13):DG(N22) DG(T14):DC(N21) DT(T15):DA(N20) DA(T16):DG(N19) DG(T17):DT(N18) DC(T18):DT(N17) DC(T19):DA(N16) DT(T20):DT(N15) DG(T21):DG(N14) DG(T22):DA(N13) DT(T23):DT(N12) DC(T24):DC(N11) DA(T25):DG(N10) DT(T26):DA(N9) DT(T27):DA(N8) DA(T28):DT(N7) DC(T29):DG(N6) chainA (446) LEU772 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 chainB (158) ILE219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (160) THR221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (175) ARG236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (179) LYS240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 (180) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (182) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 27 0 0 0 0 0 0 0 0 0 0 (184) ILE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (201) TYR267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 28 0 0 0 0 0 0 0 0 0 (273) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (274) PHE340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 21 14 0 0 0 0 0 0 (322) ARG388 0 0 0 0 0 0 0 0 0 0 0 0 0 32 1 0 0 0 0 0 0 0 0 0 0 0 (323) ASP389 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (350) ARG416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (395) PHE461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 (397) LYS463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (398) MET464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (425) GLN491 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 (429) TYR495 0 0 0 0 0 0 0 0 0 0 0 0 84 0 0 0 0 0 0 0 0 0 0 0 0 0 (432) ARG498 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 (433) VAL499 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (436) ALA502 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gfssrsvitgdafrnvnevgipmeiahritfeervsvhnigylqelvdnkmclsytqgsttyslrtvlkpgqivhrrvmdgdvvfinrpptthkhslqalrvyvhedntvkinplmcgplsadfdgdcvhlfypqsltakaevlelfsvdkqlrsshtgqlilqlgldsllslrvmmeqvfldkasaqqlamygsrslpspavvkssksgpawtffqilqlafperlscrgdgfivggsdllsfdfgvdalasiingivtgimvekgpkealaffdslqpllmehldpqgfslsledlsmsredmgvihnlivreispmvsrlrlsyedelqlensiqkvkevaanfmlksysmrnlidiksnsainklvqqigflglqlsdkkklytktlvedmaqfykkkyvstsssgdfgivkgcffhgldpyeemahsvaarevivrssrgLaepgtlfknlmavlrdivitndgtvrntcsnsivqfkyelssdnenqglfeagdpvgvlaatamsnpaykavldsspnsnsswelmkevllckvnfqnttndrrvilylnecrcgkkycqensaytvrnklkkvslkdtaveflveyriclhghihlnktllegwnismqdilqrcedainslvqkkkkkaedfkkmnlsvseccsfrgpgsskdsdmpclmfssynatdpdlertldvlcntiypvlletvikgdpriasaniiwnspetttwirslhasrrgewvldvtveksdvkqsgdawrvvidsclsvlhlidtkrsipysikqvqellglscafeqavqrlsasvrkvskgvlkehiilvannmtcsgdmlgfnyggykaltrsltgsqfellwn/vdlrdlgepflqsfckkaatsffdeyglvshqlnsynffiehglqsvfessgemlvepyatvkfgevsvdkptlysddkelvflpwharlqnmtysarmkvnvdvevtqdipigripvmvksvlcntteyrkgecafdqggyfvikgaekvfiaqeqIcTkrlwisnspwtvsyRsetKRnRfIvrlsenqkrkekvltvYflsteipvwvlffalgvasdkeavdliafdggdasitnsvvasiqeadsvcedfrhgrnalayveqqikgtKFppgesvdeclslylfpglksltqkarflgymvkclfsayagkrkcenRDnfrnkrielagellerelrvhlaharRtmtkamqrhltgdgdlkpiehyldasiitnglsrafstgawchpFrKMervsgvvanlgranplqslidlrrtrQqvlYtgRVgdAryphpshwgrlcflstpdgencglvknlsllglvstqimepvveelfdsgmeelmddtstplsgkhkvllngdwvgvcsdsdyfvadlksrrrqselprqmeikldkddkevriftdagrllrpllvvenlhklkqskpskytfehlldqgileligieeeedcttawgtkqllkqqksythceldlsfllgvscaivpfanhdhgrrvlyqsqkhcqqaigfcstnpnircdtlsqqlfypqrplfktmaseclqkdvlfngqnaivavnvhlgfnqedsivmnkaslergmfrseqirsykadvdsvvqfgkthskigrvdsldddgfpfvganmhsgdivigrctesgtdhsvklkhtergivqkvvlssnddgknyatvslrqvrspclgdkfssmhgqkgvlgyieeqenfaftnqgivpdivinphafpsrqtpgqlleaalskgiacpmqkkkgksdayskvtrhatpfstpsvdditdqlhragfsrsgnervyngrtgemmrslifmgpnfyqrlihmsedkvkfr >8him_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=A CRYO-EM STRUCTURE OF B. OLERACEA RNA POLYMERASE V ELONGATION COMPLEX AT 2.73 ANGSTROM organism=? DNA sequence DC(T4):DG(N31) DT(T5):DA(N30) DC(T6):DG(N29) DA(T7):DT(N28) DA(T8):DT(N27) DG(T9):DC(N26) DT(T10):DA(N25) DA(T11):DT(N24) DT(T12):DA(N23) DC(T13):DG(N22) DG(T14):DC(N21) DT(T15):DA(N20) DA(T16):DG(N19) DG(T17):DT(N18) DC(T18):DT(N17) DC(T19):DA(N16) DT(T20):DT(N15) DG(T21):DG(N14) DG(T22):DA(N13) DT(T23):DT(N12) DC(T24):DC(N11) DA(T25):DG(N10) DT(T26):DA(N9) DT(T27):DA(N8) DA(T28):DT(N7) DC(T29):DG(N6) chainB (158) ILE219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (160) THR221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (175) ARG236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (179) LYS240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 (180) ARG241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 (182) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 27 0 0 0 0 0 0 0 0 0 0 (184) ILE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (201) TYR267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 28 0 0 0 0 0 0 0 0 0 (273) LYS339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (274) PHE340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 21 14 0 0 0 0 0 0 (322) ARG388 0 0 0 0 0 0 0 0 0 0 0 0 0 32 1 0 0 0 0 0 0 0 0 0 0 0 (323) ASP389 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (350) ARG416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 (395) PHE461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 (397) LYS463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (398) MET464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (425) GLN491 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 (429) TYR495 0 0 0 0 0 0 0 0 0 0 0 0 84 0 0 0 0 0 0 0 0 0 0 0 0 0 (432) ARG498 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 (433) VAL499 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (436) ALA502 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vdlrdlgepflqsfckkaatsffdeyglvshqlnsynffiehglqsvfessgemlvepyatvkfgevsvdkptlysddkelvflpwharlqnmtysarmkvnvdvevtqdipigripvmvksvlcntteyrkgecafdqggyfvikgaekvfiaqeqIcTkrlwisnspwtvsyRsetKRnRfIvrlsenqkrkekvltvYflsteipvwvlffalgvasdkeavdliafdggdasitnsvvasiqeadsvcedfrhgrnalayveqqikgtKFppgesvdeclslylfpglksltqkarflgymvkclfsayagkrkcenRDnfrnkrielagellerelrvhlaharRtmtkamqrhltgdgdlkpiehyldasiitnglsrafstgawchpFrKMervsgvvanlgranplqslidlrrtrQqvlYtgRVgdAryphpshwgrlcflstpdgencglvknlsllglvstqimepvveelfdsgmeelmddtstplsgkhkvllngdwvgvcsdsdyfvadlksrrrqselprqmeikldkddkevriftdagrllrpllvvenlhklkqskpskytfehlldqgileligieeeedcttawgtkqllkqqksythceldlsfllgvscaivpfanhdhgrrvlyqsqkhcqqaigfcstnpnircdtlsqqlfypqrplfktmaseclqkdvlfngqnaivavnvhlgfnqedsivmnkaslergmfrseqirsykadvdsvvqfgkthskigrvdsldddgfpfvganmhsgdivigrctesgtdhsvklkhtergivqkvvlssnddgknyatvslrqvrspclgdkfssmhgqkgvlgyieeqenfaftnqgivpdivinphafpsrqtpgqlleaalskgiacpmqkkkgksdayskvtrhatpfstpsvdditdqlhragfsrsgnervyngrtgemmrslifmgpnfyqrlihmsedkvkfr >8hkc_CEF: title=CRYO-EM STRUCTURE OF E. COLI RNAP SIGMA32 COMPLEX organism=? DNA sequence DC(G1):DG(H54) DC(G2):DG(H53) DC(G3):DG(H52) DC(G4):DG(H51) DC(G5):DG(H50) DT(G6):DA(H49) DT(G7):DA(H48) DG(G8):DC(H47) DA(G9):DT(H46) DA(G10):DT(H45) DG(G11):DC(H44) DA(G12):DT(H43) DC(G13):DG(H42) DG(G14):DC(H41) DT(G15):DA(H40) DG(G16):DC(H39) DG(G17):DC(H38) DT(G18):DA(H37) DT(G19):DA(H36) DT(G20):DA(H35) DA(G21):DT(H34) DC(G22):DG(H33) DG(G23):DC(H32) DA(G24):DT(H31) DC(G25):DG(H30) DC(G26):DG(H29) DC(G27):DG(H28) DC(G28):DG(H27) DC(G42):DG(H13) DC(G43):DG(H12) DG(G44):DC(H11) DC(G45):DG(H10) DA(G46):DT(H9) DG(G47):DC(H8) DT(G48):DA(H7) DG(G49):DC(H6) DA(G50):DT(H5) DG(G51):DC(H4) DT(G52):DA(H3) DG(G53):DC(H2) DG(G54):DC(H1) chainC (439) GLU541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (440) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainE ( 99) HIS107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) TRP108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ALA111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) HIS114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (122) LYS130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) LEU253 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) SER263 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) ALA264 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) GLU265 0 0 0 2 3 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG266 0 2 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (246) ARG268 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) GLN269 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlffekvifeiietlftndldhgpyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltrERagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/alapvgnldsyiraanawpmlsadeeralaeklhyhgdleaaktlilshlrfvvhiarnyagyglpqadliqegniglmkavrrfnpevgvrlvsfavHWikAeiHeyvlrnwrivkvattKaqrklffnlrktkqrlgwfnqdevemvarelgvtskdvremesrmaaqdmtfdvlylqdkssnfadgieddnweeqaanrltdamqgldersqdiirarwldednkstLqeladrygvSAERvRQleknamkklraaiea/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptaHIwfLksLpsrigllldmplrdiErvlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvLppdlrplvpLDGGrFAtsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqlsikgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag >8hml_AB:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CO-CRYSTAL STRUCTURE OF THE C TERMINAL DNA BINDING DOMAIN OF SACCHAROPOLYSPORA ERYTHRAEA GLNR IN COMPLEX WITH ITS CONSERVED PROMOTER DNA IN 2.95 ANGSTROM RESOLUTION organism=Saccharopolyspora erythraea NRRL 2338 DNA sequence DG(C1):DC(D20) DT(C2):DA(D19) DG(C3):DC(D18) DT(C4):DA(D17) DT(C5):DA(D16) DA(C6):DT(D15) DC(C7):DG(D14) DC(C8):DG(D13) DG(C9):DC(D12) DC(C10):DG(D11) DG(C11):DC(D10) DA(C12):DT(D9) DT(C13):DA(D8) DG(C14):DC(D7) DT(C15):DA(D6) DT(C16):DA(D5) DA(C17):DT(D4) DC(C18):DG(D3) DG(C19):DC(D2) DT(C20):DA(D1) chainA ( 63) ARG186 0 20 8 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR187 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ASP189 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) VAL190 0 0 0 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG193 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG194 0 0 0 0 0 1 8 7 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 60) ARG186 0 0 0 0 0 0 0 0 0 0 0 0 16 10 5 0 0 0 0 0 ( 61) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 63) ASP189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 64) VAL190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 5 0 0 0 ( 67) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 68) ARG194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 15 4 0 ( 85) ARG211 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence magmltvgdlvieestytarlkgraleltykefellkylaqhagrvftraqllqevwgyggtRTvDVhvRRlraklgpeydsmigtvrnvgykfvrps/vgdlvieestytarlkgraleltykefellkylaqhagrvftraqllqevwgydffggtRTvDVhvRRlraklgpeydsmigtvRnvgykfvrps >8hml_B:C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CO-CRYSTAL STRUCTURE OF THE C TERMINAL DNA BINDING DOMAIN OF SACCHAROPOLYSPORA ERYTHRAEA GLNR IN COMPLEX WITH ITS CONSERVED PROMOTER DNA IN 2.95 ANGSTROM RESOLUTION organism=Saccharopolyspora erythraea NRRL 2338 DNA sequence DG(C1):DC(D20) DT(C2):DA(D19) DG(C3):DC(D18) DT(C4):DA(D17) DT(C5):DA(D16) DA(C6):DT(D15) DC(C7):DG(D14) DC(C8):DG(D13) DG(C9):DC(D12) DC(C10):DG(D11) DG(C11):DC(D10) DA(C12):DT(D9) DT(C13):DA(D8) DG(C14):DC(D7) DT(C15):DA(D6) DT(C16):DA(D5) DA(C17):DT(D4) DC(C18):DG(D3) DG(C19):DC(D2) DT(C20):DA(D1) chainB ( 60) ARG186 0 0 0 0 0 0 0 0 0 0 0 0 16 10 5 0 0 0 0 0 ( 61) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 ( 63) ASP189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 64) VAL190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 5 0 0 0 ( 67) ARG193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 68) ARG194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 15 4 0 ( 85) ARG211 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 prot.sequence vgdlvieestytarlkgraleltykefellkylaqhagrvftraqllqevwgydffggtRTvDVhvRRlraklgpeydsmigtvRnvgykfvrps >8hnv_A: title=CRYOEM STRUCTURE OF HPACAS9-SGRNA-DSDNA IN THE PRESENCE OF ACRIIC4 organism=? DNA sequence DA(D25):DT(C11) DT(D26):DA(C10) DA(D27):DT(C9) DT(D28):DA(C8) DG(D29):DC(C7) DA(D30):DT(C6) DT(D31):DA(C5) DT(D32):DA(C4) DT(D33):DA(C3) DC(D34):DG(C2) DA(D35):DT(C1) chainA (512) MET821 1 0 0 0 0 0 0 0 0 0 0 (644) GLN953 0 0 0 0 0 0 0 11 6 0 0 (645) TYR954 0 0 0 0 0 0 0 2 9 4 0 (687) ASN996 0 0 0 16 7 0 0 0 0 0 0 (689) ALA998 0 0 0 0 1 0 0 0 0 0 0 (690) THR999 0 0 0 0 0 2 3 0 0 0 0 (692) ASN1001 0 0 0 0 0 0 5 1 0 0 0 (694) ASP1003 0 0 0 1 0 0 0 0 0 0 0 prot.sequence knlnyilglalgiasvgwavveidekenplrlidvgvrtferaevpktgeslalsrrlarsarrltqrrvarlkkakrllksenillrlphqvwqlrvegldhklerqewaavllhlikhrgyallsgvdnnhkllqqatyrspaelavkkfeveeghirnqqgaythtfsrldllaemellfsrqqhfgnpfasekllenltallmwqkpalsgeailkmlgkctfedeykaakntysaerfvwitkrlalmeqpydknrlfysqvmemkayhqirkvlegnnlkaewaelkanptlldeigtafslyktdedisaylagklsqpvlnallenlsfdkfiqlslkalykllplmqqdeacreiynhhflpqipadeirnpvvlrtltqarkvingvvrlygsparihietgyvarflcnfiadnmhltgegkrkvfasngqitallrsrwglaksredndrhhaldavvvacsfkqeveirifsdnpklelvqplfvsrmptrkmtgqghMetvksakrlnegisvikmpltklklkdlelmvnrerekdlydtlkarleafnddpakafaepfikkggaivksvrveqiqksgvlvregngvadnasmvrvdvftkggkyflvpiytwqvakgilpnkaatQYkdeedwevmdnsatfkfslhpndlvklvtkkktilgyfnglNrATgNiDikehdldkskgkqgifegvgiklalsfekyqvdelgknirlckpskrqpvr >8hnw_A:Ribonuclease_H-like; title=CRYSTAL STRUCTURE OF HPACAS9-SGRNA SURVEILLANCE COMPLEX BOUND TO DOUBLE-STRANDED DNA organism=Haemophilus parainfluenzae DNA sequence DT(C1):DA(D11) DA(C2):DT(D10) DA(C3):DT(D9) DA(C4):DT(D8) DA(C5):DT(D7) DT(C6):DA(D6) DC(C7):DG(D5) DA(C8):DT(D4) DT(C9):DA(D3) DA(C10):DT(D2) DT(C11):DA(D1) chainA (708) GLN953 0 0 4 8 0 0 0 0 0 0 0 (709) TYR954 0 0 8 3 0 0 0 0 0 0 0 (751) ASN996 0 0 0 0 0 1 5 11 0 0 0 (753) ALA998 0 0 0 0 0 0 2 0 0 0 0 (754) THR999 0 0 0 0 5 5 0 0 0 0 0 (756) ASN1001 0 0 0 1 7 1 0 0 0 0 0 (758) ASP1003 0 0 0 0 0 0 0 1 0 0 0 prot.sequence ilgldlgiasvgwavveidekenplrlidvgvrtfegeslalsrrlarsarrltqrrvarlkkakrllksenillstderlphqvwqlrvegldhklerqewaavllhlikhrgylsqrkneskelgallsgvdnnhkllqqatyrspaelavkkfeveeghirnqqgaythtfsrldllaemellfsrqqhfgnpfasekllenltallmwqkpalsgeailkmlgkfedeykaakntysaerfvwitklnnlriqengleralndnerlalmeqpydknrlfysqvrsilklsdifkglrietkavlmemkayhqirkvlegnnlkaewaelkanptlldeigtafslyktdedisaylagklsqpvlnallenlsfdkfiqlslkalykllplmqqglrydeacreiyflpqipadeirnpvvlrtltqarkvingvvrlygsparihietrnlndtryvarflcnfiadnmhlvfasngqitallndrhhaldavvvacstvamqqkitrflhfptpwqffkqeveirifsdnpklelenrlpdrpqanhefvqplfvsrmptrkmtgqghmetvksakrlnegisvikmpltklklkdlelmvnrerekdlydtlkarleafnddpakafaepfikkggaivksvrveqiqksgvlvregngvadnasmvrvdvftkggkyflvpiytwqvakgilpnkaatQYkdeedwevmdnsatfkfslhpndlvklvtkkktilgyfnglNrATgNiDikehdldkskgkqgifegvgiklalsfekyqvdelgknirlckpskrqpvr >8hqy_ABCDEFGH: title=CRYO-EM STRUCTURE OF SSX1 BOUND TO THE H2AK119UB NUCLEOSOME AT A RESOLUTION OF 3.05 ANGSTROM organism=? DNA sequence DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DA(J145):DT(I3) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 30) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH prot.sequence pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlsaihakrvtimpkdiqlarrirger/rKVlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvfleNvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkc/kesysvyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlsaihakrvtimpkdiqlarrirge/vLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfg/kAktrssraglqfpvgrvhrllrkgnyservgagapvylaavleYltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kEsysvyvykvlkqvhpdtgisskamgimnsfvndiferiageaSrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8hr1_ABCDEFGH:Histone-fold;PH_domain-like; title=CRYO-EM STRUCTURE OF SSX1 BOUND TO THE UNMODIFIED NUCLEOSOME AT A RESOLUTION OF 3.02 ANGSTROM organism=? DNA sequence DT(J-72):DA(I72) DG(J-71):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 28) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH prot.sequence phRyRpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlsaihakrvtimpkdiqlarrirger/rkVlRdniqgitkpairrlarrggvkrIsgliyeetrgvlkvfleNvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kaKtRssraglqfpvgrvhrllrkgnyServgagapvylaavleyLtaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkc/keSySvyvykvlkqvhpdtgisskamgImnsfvndiferiageasRlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/hRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlsaihakrvtimpkdiqlarrirge/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/kaktrssraglqfpvgrvhrllrkGnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/kesysvyvykvlkqvhpdtgisskAmgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8hr1_F:Histone-fold; title=CRYO-EM STRUCTURE OF SSX1 BOUND TO THE UNMODIFIED NUCLEOSOME AT A RESOLUTION OF 3.02 ANGSTROM organism=? DNA sequence DT(J-72):DA(I72) DG(J-71):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainF ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >8hr5_A:Zinc_beta-ribbon; title=CRYO-EM STRUCTURE OF THE CNCAS12F1-SGRNA-DNA COMPLEX organism=? DNA sequence DA(E2):DT(D27) DA(E3):DT(D26) DC(E4):DG(D25) DC(E5):DG(D24) DT(E6):DA(D23) chainA (127) TYR150 0 0 6 4 0 (139) ASP162 0 6 4 0 0 (142) SER165 0 0 0 4 10 (143) LEU166 0 0 0 0 3 (145) THR168 0 0 0 0 2 (146) GLN169 0 0 0 0 28 (179) ARG202 0 0 4 10 0 (181) ARG204 0 4 4 0 0 prot.sequence mitvrkikltimgdkdtrnsqykwirdeqynqyralnmgmtylavndilymnesgleirtikdlkdcekdidknkkeieklkislvenkiedyklkivelnkileetqkermdiqkefkekyvddlYqvldkipfkhlDnkSLvTQrikadiksdksngllkgersirnykrnfplmtRgRdlkfkyddnddieikwmegikfkvilgnriknslelrhtlhkviegkykicdsslqfdknnnlilnltldipidivnkkvsgrvvgvdlglkipaycalndyikksigriddflkvrtqmqsrrrrlqiaiqsakggkgrvnklqalerfaekeknfaktynhflssnivkfavsnqaeqinmellslketqnksilrnwsyyqlqtmieykaqregikvkyidpyhtsqtcskcgnyeegqresqadfickkcgykvnadynaarniamsnkyitkkeeskyyk >8hsg_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THERMUS THERMOPHILUS RNA POLYMERASE ELONGATION COMPLEX organism=? DNA sequence DG(T2):DC(N40) DT(T3):DA(N39) DG(T4):DC(N38) DC(T5):DG(N37) DA(T6):DT(N36) DC(T7):DG(N35) DT(T8):DA(N34) DA(T9):DT(N33) DC(T10):DG(N32) DC(T11):DG(N31) DA(T12):DT(N30) DC(T13):DG(N29) DA(T14):DT(N28) DA(T15):DT(N27) DG(T16):DC(N26) DC(T17):DG(N25) DA(T18):DT(N24) DC(T19):DG(N23) DC(T20):DG(N22) DC(T21):DG(N21) DA(T22):DC(N10) DG(T23):DC(N9) DG(T24):DT(N8) DT(T25):DC(N7) DG(T26):DT(N6) DG(T27):DA(N5) DA(T28):DT(N4) chainI (420) ARG420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (422) ARG422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeedkgkgglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltReRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglaskr >8hsg_IJ: title=THERMUS THERMOPHILUS RNA POLYMERASE ELONGATION COMPLEX organism=? DNA sequence DT(N4):DA(T28) DA(N5):DG(T27) DT(N6):DG(T26) DC(N7):DT(T25) DT(N8):DG(T24) DC(N9):DG(T23) DC(N10):DA(T22) DG(N21):DC(T21) DG(N22):DC(T20) DG(N23):DC(T19) DT(N24):DA(T18) DG(N25):DC(T17) DC(N26):DG(T16) DT(N27):DA(T15) DT(N28):DA(T14) DG(N29):DC(T13) DT(N30):DA(T12) DG(N31):DC(T11) DG(N32):DC(T10) DT(N33):DA(T9) DA(N34):DT(T8) DG(N35):DC(T7) DT(N36):DA(T6) DG(N37):DC(T5) DC(N38):DG(T4) DA(N39):DT(T3) DC(N40):DG(T2) chainI (420) ARG420 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (422) ARG422 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (384) ASN593 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (496) ALA705 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (497) PRO706 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (879) THR1088 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (880) ALA1089 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeedkgkgglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltReRagfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglaskr/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtNpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrTAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqlglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkeavea >8hsr_I:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=THERMUS THERMOPHILUS RHO-ENGAGED RNAP ELONGATION COMPLEX organism=? DNA sequence DT(N4):DA(T28) DA(N5):DG(T27) DT(N6):DG(T26) DC(N7):DT(T25) DT(N8):DG(T24) DC(N9):DG(T23) DC(N10):DA(T22) DG(N21):DC(T21) DG(N22):DC(T20) DG(N23):DC(T19) DT(N24):DA(T18) DG(N25):DC(T17) DC(N26):DG(T16) DT(N27):DA(T15) DT(N28):DA(T14) DG(N29):DC(T13) DT(N30):DA(T12) DG(N31):DC(T11) DG(N32):DC(T10) DT(N33):DA(T9) DA(N34):DT(T8) DG(N35):DC(T7) DT(N36):DA(T6) DG(N37):DC(T5) DA(N39):DT(T3) DC(N40):DG(T2) DC(N41):DG(T1) chainI (420) ARG420 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (422) ARG422 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) ALA423 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeedkgkgglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltReRAgfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglaskr >8hsr_IJ: title=THERMUS THERMOPHILUS RHO-ENGAGED RNAP ELONGATION COMPLEX organism=? DNA sequence DT(N4):DA(T28) DA(N5):DG(T27) DT(N6):DG(T26) DC(N7):DT(T25) DT(N8):DG(T24) DC(N9):DG(T23) DC(N10):DA(T22) DG(N21):DC(T21) DG(N22):DC(T20) DG(N23):DC(T19) DT(N24):DA(T18) DG(N25):DC(T17) DC(N26):DG(T16) DT(N27):DA(T15) DT(N28):DA(T14) DG(N29):DC(T13) DT(N30):DA(T12) DG(N31):DC(T11) DG(N32):DC(T10) DT(N33):DA(T9) DA(N34):DT(T8) DG(N35):DC(T7) DT(N36):DA(T6) DG(N37):DC(T5) DA(N39):DT(T3) DC(N40):DG(T2) DC(N41):DG(T1) chainI (420) ARG420 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (422) ARG422 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) ALA423 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (409) ASN593 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (521) ALA705 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (522) PRO706 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (905) ALA1089 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence meikrfgrireviplpplteiqvesyrralqadvppekrenvgiqaafretfpieeedkgkgglvldfleyrlgeppfpqdecrekdltyqaplyarlqlihkdtglikedevflghiplmtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidlevepngvvsmkvnkrkfplvlllrvlgydqetlarelgaygelvqglmdesvfamrpeealirlftllrpgdppkrdkavayvygliadprrydlgeagrykaeeklgirlsgrtlarfedgefkdevflptlrylfaltagvpghevddidhlgnrrirtvgelmtdqfrvglarlargvrermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnplsslrhkrrisalgpggltReRAgfdvrdvhrthygricpvetpeganiglitslaayarvdelgfirtpyrrvvggvvtdevvymtateedrytiaqantplegnriaaervvarrkgepvivspeevefmdvspkqvfsvntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeedgevakvdgnrivvryedgrlveyplrrfyrsnqgtaldqrprvvvgqrvrkgdlladgpasengflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgperitrdiphlseaalrdldeegvvrigaevkpgdilvgrtsfkgeseptpeerllrsifgekardvkdtslrvppgeggivvrtvrlrrgdpgvelkpgvrevvrvyvaqkrklqvgdklanrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqryispifdgakepeikellaqafevyfgkrkgegfgvdkrevevlrraeklglvtpgktpeeqlkelflqgkvvlydgrtgepiegpivvgqmfimklyhmvedkmharstgpyslitqqplggkaqfggqrfgemevwaleaygaahtlqemltlksddiegrnaayeaiikgedvpepsvpesfrvlvkelqalaldvqtldekdnpvdifeglaskr/kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgkykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsateleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkdgeevvkgqelapgvvsrldgvalyrfasilvvkarvypfeddvevstgdrvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtNpgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnrAPtlhrlgiqafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkggadtalrtAdsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqlglprvielfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkeavea >8htx_AB: title=CRYSTAL STRUCTURE OF BANP IN COMPLEX WITH METHYLATED DNA organism=? DNA sequence DC(D1):DG(C12) DT(D2):DA(C11) DC(D3):DG(C10) DT(D4):DA(C9) 5CM(E5):DG(C8) DC(D7):DC(C7) DG(D8):DG(C6) DA(D9):DT(C4) DG(D10):DC(C3) DA(D11):DT(C2) DG(D12):DC(C1) DC(E1):DG(F12) DT(E2):DA(F11) DC(E3):DG(F10) DT(E4):DA(F9) 5CM(E5):DG(F8) DG(E6):DC(F7) DC(E7):DG(F6) DG(E8):DG(C6) DA(E9):DT(F4) DG(E10):DC(F3) DA(E11):DT(F2) DG(E12):DC(F1) chainA (106) SER313 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (109) ARG316 0 0 0 0 0 21 14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (110) THR317 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (113) ARG320 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (114) ARG321 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 chainB (105) SER313 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 (108) ARG316 0 0 0 0 1 0 0 0 0 0 0 0 0 0 2 15 19 0 0 0 0 0 0 (109) THR317 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (113) ARG321 0 0 0 0 0 0 0 0 0 0 13 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nseedypngtwlgdennpemrvrcaiipsdmlhistncrtaekmaltlldylfhrevqavsnlsgqgkhgkkqldpltiygirchlfykfgitesdwyrikqsidSkcRTawRRkqr/seedypngtwlgdennpemrvrcaiipsdmlhistncrtaekmaltlldylfhrevqavsnlsgqgkhgkkqldpltiygirchlfykfgitesdwyrikqsidSkcRTawrRkqr >8htx_B: title=CRYSTAL STRUCTURE OF BANP IN COMPLEX WITH METHYLATED DNA organism=? DNA sequence DC(F1):DG(E12) DT(F2):DA(E11) DC(F3):DG(E10) DT(F4):DA(E9) DG(C6):DG(E8) DG(F6):DC(E7) DC(F7):DG(E6) DG(F8):5CM(E5) DA(F9):DT(E4) DG(F10):DC(E3) DA(F11):DT(E2) DG(F12):DC(E1) DC(C1):DG(D12) DT(C2):DA(D11) DC(C3):DG(D10) DT(C4):DA(D9) DG(C6):DG(D8) DC(C7):DC(D7) DG(C8):5CM(E5) DA(C9):DT(D4) DG(C10):DC(D3) DA(C11):DT(D2) DG(C12):DC(D1) chainB (105) SER313 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) ARG316 0 0 0 0 0 0 19 15 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (109) THR317 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (113) ARG321 0 0 0 0 0 0 0 0 0 0 0 2 13 0 0 0 0 0 0 0 0 0 0 prot.sequence seedypngtwlgdennpemrvrcaiipsdmlhistncrtaekmaltlldylfhrevqavsnlsgqgkhgkkqldpltiygirchlfykfgitesdwyrikqsidSkcRTawrRkqr >8hxy_A:Histone-fold; title=CRYO-EM STRUCTURE OF THE HISTONE DEACETYLASE COMPLEX RPD3S IN COMPLEX WITH NUCLEOSOME organism=? DNA sequence DC(I164):DG(J180) DT(I165):DA(J179) DG(I166):DC(J178) DC(I167):DG(J177) DC(I168):DG(J176) DA(I169):DT(J175) DG(I170):DC(J174) DT(I171):DA(J173) DT(I172):DA(J172) DC(I173):DG(J171) DT(I174):DA(J170) DA(I175):DT(J169) DG(I176):DC(J168) DA(I177):DT(J167) DC(I178):DG(J166) DT(I179):DA(J165) DG(I180):DC(J164) DG(I181):DC(J163) DA(I182):DT(J162) DG(I183):DC(J161) DA(I184):DT(J160) DA(I185):DT(J159) DT(I186):DA(J158) DC(I187):DG(J157) DC(I188):DG(J156) DC(I189):DG(J155) DG(I190):DC(J154) DG(I191):DC(J153) DT(I192):DA(J152) DG(I193):DC(J151) DC(I194):DG(J150) DC(I195):DG(J149) DG(I196):DC(J148) DA(I197):DT(J147) DG(I198):DC(J146) DG(I199):DC(J145) DC(I200):DG(J144) DC(I201):DG(J143) DG(I202):DC(J142) DC(I203):DG(J141) DT(I204):DA(J140) DC(I205):DG(J139) DA(I206):DT(J138) DA(I207):DT(J137) DT(I208):DA(J136) DT(I209):DA(J135) DG(I210):DC(J134) DG(I211):DC(J133) DT(I212):DA(J132) DC(I213):DG(J131) DG(I214):DC(J130) DT(I215):DA(J129) DA(I216):DT(J128) DG(I217):DC(J127) DA(I218):DT(J126) DC(I219):DG(J125) DA(I220):DT(J124) DG(I221):DC(J123) DC(I222):DG(J122) DT(I223):DA(J121) DC(I224):DG(J120) DT(I225):DA(J119) DA(I226):DT(J118) DG(I227):DC(J117) DC(I228):DG(J116) DA(I229):DT(J115) DC(I230):DG(J114) DC(I231):DG(J113) DG(I232):DC(J112) DC(I233):DG(J111) DT(I234):DA(J110) DT(I235):DA(J109) DA(I236):DT(J108) DA(I237):DT(J107) DA(I238):DT(J106) DC(I239):DG(J105) DG(I240):DC(J104) DC(I241):DG(J103) DA(I242):DT(J102) DC(I243):DG(J101) DG(I244):DC(J100) DT(I245):DA(J99) DA(I246):DT(J98) DC(I247):DG(J97) DG(I248):DC(J96) DC(I249):DG(J95) DG(I250):DC(J94) DC(I251):DG(J93) DT(I252):DA(J92) DG(I253):DC(J91) DT(I254):DA(J90) DC(I255):DG(J89) DC(I256):DG(J88) DC(I257):DG(J87) DC(I258):DG(J86) DC(I259):DG(J85) DG(I260):DC(J84) DC(I261):DG(J83) DG(I262):DC(J82) DT(I263):DA(J81) DT(I264):DA(J80) DT(I265):DA(J79) DT(I266):DA(J78) DA(I267):DT(J77) DA(I268):DT(J76) DC(I269):DG(J75) DC(I270):DG(J74) DG(I271):DC(J73) DC(I272):DG(J72) DC(I273):DG(J71) DA(I274):DT(J70) DA(I275):DT(J69) DG(I276):DC(J68) DG(I277):DC(J67) DG(I278):DC(J66) DG(I279):DC(J65) DA(I280):DT(J64) DT(I281):DA(J63) DT(I282):DA(J62) DA(I283):DT(J61) DC(I284):DG(J60) DT(I285):DA(J59) DC(I286):DG(J58) DC(I287):DG(J57) DC(I288):DG(J56) DT(I289):DA(J55) DA(I290):DT(J54) DG(I291):DC(J53) DT(I292):DA(J52) DC(I293):DG(J51) DT(I294):DA(J50) DC(I295):DG(J49) DC(I296):DG(J48) DA(I297):DT(J47) DG(I298):DC(J46) DG(I299):DC(J45) DC(I300):DG(J44) DA(I301):DT(J43) DC(I302):DG(J42) DG(I303):DC(J41) DT(I304):DA(J40) DG(I305):DC(J39) DT(I306):DA(J38) DC(I307):DG(J37) DA(I308):DT(J36) DG(I309):DC(J35) DA(I310):DT(J34) DT(I311):DA(J33) DA(I312):DT(J32) DT(I313):DA(J31) DA(I314):DT(J30) DT(I315):DA(J29) DA(I316):DT(J28) DC(I317):DG(J27) DA(I318):DT(J26) DT(I319):DA(J25) DC(I320):DG(J24) DC(I321):DG(J23) DT(I322):DA(J22) DG(I323):DC(J21) DT(I324):DA(J20) DG(I325):DC(J19) DC(I326):DG(J18) DA(I327):DT(J17) DT(I328):DA(J16) DG(I329):DC(J15) DT(I330):DA(J14) DA(I331):DT(J13) DT(I332):DA(J12) DT(I333):DA(J11) chainA ( 6) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ggvkpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger >8hxz_C:Histone-fold; title=CRYO-EM STRUCTURE OF EAF3 CHD IN COMPLEX WITH NUCLEOSOME organism=? DNA sequence DC(J187):DG(I157) DA(J188):DT(I156) DA(J189):DT(I155) DT(J190):DA(I154) DA(J191):DT(I153) DC(J192):DG(I152) DA(J193):DT(I151) DT(J194):DA(I150) DG(J195):DC(I149) DC(J196):DG(I148) DA(J197):DT(I147) DC(J198):DG(I146) DA(J199):DT(I145) DG(J200):DC(I144) DG(J201):DC(I143) DA(J202):DT(I142) DT(J203):DA(I141) DG(J204):DC(I140) DT(J205):DA(I139) DA(J206):DT(I138) DT(J207):DA(I137) DA(J208):DT(I136) DT(J209):DA(I135) DA(J210):DT(I134) DT(J211):DA(I133) DC(J212):DG(I132) DT(J213):DA(I131) DG(J214):DC(I130) DA(J215):DT(I129) DC(J216):DG(I128) DA(J217):DT(I127) DC(J218):DG(I126) DG(J219):DC(I125) DT(J220):DA(I124) DG(J221):DC(I123) DC(J222):DG(I122) DC(J223):DG(I121) DT(J224):DA(I120) DG(J225):DC(I119) DG(J226):DC(I118) DA(J227):DT(I117) DG(J228):DC(I116) DA(J229):DT(I115) DC(J230):DG(I114) DT(J231):DA(I113) DA(J232):DT(I112) DG(J233):DC(I111) DG(J234):DC(I110) DG(J235):DC(I109) DA(J236):DT(I108) DG(J237):DC(I107) DT(J238):DA(I106) DA(J239):DT(I105) DA(J240):DT(I104) DT(J241):DA(I103) DC(J242):DG(I102) DC(J243):DG(I101) DC(J244):DG(I100) DC(J245):DG(I99) DT(J246):DA(I98) DT(J247):DA(I97) DG(J248):DC(I96) DG(J249):DC(I95) DC(J250):DG(I94) DG(J251):DC(I93) DG(J252):DC(I92) DT(J253):DA(I91) DT(J254):DA(I90) DA(J255):DT(I89) DA(J256):DT(I88) DA(J257):DT(I87) DA(J258):DT(I86) DC(J259):DG(I85) DG(J260):DC(I84) DC(J261):DG(I83) DG(J262):DC(I82) DG(J263):DC(I81) DG(J264):DC(I80) DG(J265):DC(I79) DG(J266):DC(I78) DA(J267):DT(I77) DC(J268):DG(I76) DA(J269):DT(I75) DG(J270):DC(I74) DC(J271):DG(I73) DG(J272):DC(I72) DC(J273):DG(I71) DG(J274):DC(I70) DT(J275):DA(I69) DA(J276):DT(I68) DC(J277):DG(I67) DG(J278):DC(I66) DT(J279):DA(I65) DG(J280):DC(I64) DC(J281):DG(I63) DG(J282):DC(I62) DT(J283):DA(I61) DT(J284):DA(I60) DT(J285):DA(I59) DA(J286):DT(I58) DA(J287):DT(I57) DG(J288):DC(I56) DC(J289):DG(I55) DG(J290):DC(I54) DG(J291):DC(I53) DT(J292):DA(I52) DG(J293):DC(I51) DC(J294):DG(I50) DT(J295):DA(I49) DA(J296):DT(I48) DG(J297):DC(I47) DA(J298):DT(I46) DG(J299):DC(I45) DC(J300):DG(I44) DT(J301):DA(I43) DG(J302):DC(I42) DT(J303):DA(I41) DC(J304):DG(I40) DT(J305):DA(I39) DA(J306):DT(I38) DC(J307):DG(I37) DG(J308):DC(I36) DA(J309):DT(I35) DC(J310):DG(I34) DC(J311):DG(I33) DA(J312):DT(I32) DA(J313):DT(I31) DT(J314):DA(I30) DT(J315):DA(I29) DG(J316):DC(I28) DA(J317):DT(I27) DG(J318):DC(I26) DC(J319):DG(I25) DG(J320):DC(I24) DG(J321):DC(I23) DC(J322):DG(I22) DC(J323):DG(I21) DT(J324):DA(I20) DC(J325):DG(I19) DG(J326):DC(I18) DG(J327):DC(I17) DC(J328):DG(I16) DA(J329):DT(I15) DC(J330):DG(I14) DC(J331):DG(I13) DG(J332):DC(I12) DG(J333):DC(I11) DG(J334):DC(I10) DA(J335):DT(I9) DT(J336):DA(I8) DT(J337):DA(I7) DC(J338):DG(I6) DT(J339):DA(I5) DC(J340):DG(I4) DG(J341):DC(I3) DA(J342):DT(I2) DT(J343):DA(I1) DA(J344):DT(I0) DT(J345):DA(I-1) DC(J346):DG(I-2) DG(J347):DC(I-3) DA(J348):DT(I-4) DA(J349):DT(I-5) DT(J350):DA(I-6) chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence Rakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpkk >8hyj_ABE: title=A CRYO-EM STRUCTURE OF KTF1-BOUND POLYMERASE V TRANSCRIPTION ELONGATION COMPLEX organism=? DNA sequence DC(T-22):DG(N22) DA(T-21):DT(N21) DC(T-20):DG(N20) DT(T-19):DA(N19) DC(T-18):DG(N18) DT(T-17):DA(N17) DA(T-16):DT(N16) DC(T-15):DG(N15) DC(T-14):DG(N14) DG(T-13):DC(N13) DA(T-12):DT(N12) DT(T-11):DA(N11) DA(T-10):DT(N10) DA(T-9):DT(N9) DG(T-8):DC(N8) DC(T-7):DG(N7) DA(T-6):DT(N6) DG(T-5):DC(N5) DA(T-4):DT(N4) DC(T-3):DG(N3) DA(T-2):DT(N2) DT(T-1):DA(N0) DA(T0):DT(N-1) DC(T1):DT(N-2) DC(T2):DG(N-3) DT(T3):DG(N-4) DC(T4):DT(N-5) DT(T5):DA(N-6) DC(T6):DA(N-7) DG(T7):DA(N-8) DA(T8):DG(N-9) DC(T9):DG(N-10) DC(T11):DA(N-12) DT(T12):DC(N-13) DG(T13):DA(N-14) chainA (192) LYS240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (193) ASP241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (328) PRO416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (684) LEU772 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (685) ALA773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (285) PHE344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 (405) MET468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 chainE prot.sequence gitfalashheiciqsisesainhpsqltnaflglplefgkcescgatepdkceghfgyiqlpvpiyhpahvnelkqmlsllclkclkikeasqisikdrasdgasylelklpsrsrlqpgcwnflerygyrygsdytrpllarevkeilrripeesrkkltakghipqegyileylpvppnclspsrielKDvlkkviaikssrsgetnfeshkaeasemfrvvdtylkgsgfssrsvitgdayrhvnevgipieiaqritfeervsvhnrgylqklvddklclsytqgsttyslrdgskghtelkpgqvvhrrvmdgdvvfinrpPtthkhslqalrvyvhedntvkinplmcsplsadfdgdcvhlfypqslsakaevmelfsvekqllsshtgqlilqmgsdsllslrvmlervfldkataqqlamygslslpppalrkssksgpawtvfqilqlafperlsckgdrflvdgsdllkfdfgvdamgsiineivtsiflekgpketlgffdslqpllmeslfaegfslsledlsmsradmdvihnliireispmvsrlrlsyrdelqlensihkvkevaanfmlksysirnlidiksnsaitklvqqtgflglqlsdkkkfytktlvedmaifckrkygrisssgdfgivkgcffhgldpyeemahsiaarevivrssrgLAepgtlfknlmavlrdivitndgtvrntcsnsviqfkygvdserghqglfeagepvgvlaatamsnpaykavldsspnsnsswelmkevllckvnfqnttndrrvilylnechcgkrfcqenaactvrnklnkvslkdtaveflveyrkqgidsclhghihlnktllqdwnismqdihqkcedvinslgqkkkkkatddfkrtslsvseccsfrdpcgskgsdmpcltfsynatdpdlertldvlcntvypvlleivikgdsricsaniiwnssdmttwirnrhasrrgewvldvtveksavkqsgdawrvvidsclsvlhlidtkrsipysvkqvqellglscafeqavqrlsasvrmvskgvlkehiillannmtcsgtmlgfnsggykaltrslnikapfteatliaprkcfekaaekchtdslstvvgscswgkrvdvgtgsqfellwnqket/nlselgegflqsfckkaatsffdkyglishqlnsynyfiehglqnvfqsfgemlvepswryatvkfgevtvekptffsddkeleflpwharlqnmtysarikvnvqvevfdiligsipvmvksilcktsekgkenckkgdcafdqggyfvikgaekvfiaqeqmctkrlwisnspwtvsfrsenkrnrfivrlsenekaedykrrekvltvyflsteipvwllffalgvssdkeamdliafdgddasitnsliasihvadavceafrcgnnaltyveqqikstkFppaesvdeclhlylfpglqslkkkarflgymvkcllnsyagkrkcenrdsfrnkrielagellereirvhlaharrkmtramqkhlsgkpiehyldasvitnglsrafstgawshpfrkMervsgvvanlgranplqtlidlrrtrqqvdaryphpshwgrvcflstpdgencglvknmsllglvstqslesvveklfacgmeelmddtctplfgkhkvllngdwvglcadsesfvaelksrrrqselpremeikrdkddnevriftdagrllrpllvvenlqklkqeqypfdhlldhgileligieeeedcntawgikqllkepkiythceldlsfllgvscavvpfanhdhgrrvlyqsqkhcqqaigfsstnpnircdtlsqqlfypqkplfktlaseclkkevlfngqnaivavnvhlgynqedsivmnkaslergmfrseqirsykaevdvqfgkthvdsleddgfpfiganmstgdivigrchsiklkhtergivqkvvlssndegknfaavslrqvrspclgdkfssmhgqkgvlgyleeqqnfpftiqgivpdivinphafpsrqtpgqlleaalskgiacpiqytkltrhatpfstpgvteiteqlhragfsrwgnervyngrsgemmrsmifmgptfyqrlvhmsedkvkfrntgpvhpltrqpvadrkrfggikfgemerdcliahgasanlherlftlsdssqmhicrkcktyangpycrvcvssdhvvrvyvpygakllcqelfsmgitlnfdtkl/lskyvdlsseeshryylarrnglqmlrdrgyevsdedinlslhdfrtvygerpdvdrlrisalhrsdstkkvkivffgtsmvkvnairsvvadilsqetitglilvlqnhvtnqalkaielfsfkveifqitdllvnitkhslkpqhqvlndeekttllkkfsieekqlpriskkdaivryyglekgqvvkvnyrgelteshvafrcvw >8hyj_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=A CRYO-EM STRUCTURE OF KTF1-BOUND POLYMERASE V TRANSCRIPTION ELONGATION COMPLEX organism=? DNA sequence DA(N-14):DG(T13) DC(N-13):DT(T12) DA(N-12):DC(T11) DG(N-10):DC(T9) DG(N-9):DA(T8) DA(N-8):DG(T7) DA(N-7):DC(T6) DA(N-6):DT(T5) DT(N-5):DC(T4) DG(N-4):DT(T3) DG(N-3):DC(T2) DT(N-2):DC(T1) DT(N-1):DA(T0) DA(N0):DT(T-1) DT(N2):DA(T-2) DG(N3):DC(T-3) DT(N4):DA(T-4) DC(N5):DG(T-5) DT(N6):DA(T-6) DG(N7):DC(T-7) DC(N8):DG(T-8) DT(N9):DA(T-9) DT(N10):DA(T-10) DA(N11):DT(T-11) DT(N12):DA(T-12) DC(N13):DG(T-13) DG(N14):DC(T-14) DG(N15):DC(T-15) DT(N16):DA(T-16) DA(N17):DT(T-17) DG(N18):DC(T-18) DA(N19):DT(T-19) DG(N20):DC(T-20) DT(N21):DA(T-21) DG(N22):DC(T-22) chainB (285) PHE344 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (405) MET468 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nlselgegflqsfckkaatsffdkyglishqlnsynyfiehglqnvfqsfgemlvepswryatvkfgevtvekptffsddkeleflpwharlqnmtysarikvnvqvevfdiligsipvmvksilcktsekgkenckkgdcafdqggyfvikgaekvfiaqeqmctkrlwisnspwtvsfrsenkrnrfivrlsenekaedykrrekvltvyflsteipvwllffalgvssdkeamdliafdgddasitnsliasihvadavceafrcgnnaltyveqqikstkFppaesvdeclhlylfpglqslkkkarflgymvkcllnsyagkrkcenrdsfrnkrielagellereirvhlaharrkmtramqkhlsgkpiehyldasvitnglsrafstgawshpfrkMervsgvvanlgranplqtlidlrrtrqqvdaryphpshwgrvcflstpdgencglvknmsllglvstqslesvveklfacgmeelmddtctplfgkhkvllngdwvglcadsesfvaelksrrrqselpremeikrdkddnevriftdagrllrpllvvenlqklkqeqypfdhlldhgileligieeeedcntawgikqllkepkiythceldlsfllgvscavvpfanhdhgrrvlyqsqkhcqqaigfsstnpnircdtlsqqlfypqkplfktlaseclkkevlfngqnaivavnvhlgynqedsivmnkaslergmfrseqirsykaevdvqfgkthvdsleddgfpfiganmstgdivigrchsiklkhtergivqkvvlssndegknfaavslrqvrspclgdkfssmhgqkgvlgyleeqqnfpftiqgivpdivinphafpsrqtpgqlleaalskgiacpiqytkltrhatpfstpgvteiteqlhragfsrwgnervyngrsgemmrsmifmgptfyqrlvhmsedkvkfrntgpvhpltrqpvadrkrfggikfgemerdcliahgasanlherlftlsdssqmhicrkcktyangpycrvcvssdhvvrvyvpygakllcqelfsmgitlnfdtkl >8i23_C:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CLOSTRIDIUM THERMOCELLUM RNA POLYMERASE TRANSCRIPTION OPEN COMPLEX WITH SIGI1 AND ITS PROMOTER organism=? DNA sequence DT(O19):DA(P135) DA(O20):DT(P134) DA(O21):DT(P133) DT(O22):DA(P132) DA(O23):DT(P131) DT(O24):DA(P130) DA(O25):DT(P129) DC(O26):DG(P128) DA(O27):DT(P127) DC(O28):DG(P126) DA(O29):DT(P125) DA(O30):DT(P124) DA(O31):DT(P123) DA(O32):DT(P122) DA(O33):DT(P121) DA(O34):DT(P120) DA(O35):DT(P119) DG(O36):DC(P118) DC(O37):DG(P117) DG(O39):DC(P115) DA(O40):DT(P114) DT(O41):DA(P113) DG(O42):DC(P112) DT(O43):DA(P111) DA(O44):DT(P110) DT(O45):DA(P109) DA(O46):DT(P108) DC(O47):DG(P107) DG(O48):DC(P106) DA(O49):DA(P101) DA(O50):DA(P100) DG(O51):DT(P99) DT(O52):DC(P98) DA(O53):DG(P93) DA(O54):DA(P92) DT(O55):DT(P91) DC(O56):DC(P90) DT(O57):DC(P89) DA(O58):DC(P88) DC(O59):DT(P87) DT(O60):DC(P86) DG(O61):DT(P85) DA(O62):DT(P84) DA(O63):DA(P83) DG(O64):DC(P82) DG(O65):DT(P81) DG(O66):DA(P80) DA(O67):DG(P79) chainC (130) ARG131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) TRP168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0 0 0 (239) ARG240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 (242) GLU243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (490) PHE491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (518) ARG519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 (543) PRO544 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vhpvklgrnvrmsyskidevidmpnlieiqknsyeqflkegfkevfkdvnpitdytgnlilefvdysldeppkysvdeckerdatyaaplkvkvrlinketgevkeqeifmgdfplmtetgtfiingaeRvivsqlvrspgiyyamkidkagkqlfsntvipnrgaWleyetdsndvlsvridrtrklpltvlvralgygtdleitelfgederilatiqkdstkteeeglleiykrlRpgEpptvesakallhglffdpkrydlakpgrfkfnkklsiaarihgfiagenikdpdtgeiivaegetisrekaetiqnagvntvilrvdgknvkvigndmvdikryvdfdpkeiginekvkrdvlmeileeykgkgddaikkalqeriddlipkhitkediissisyiiglsygigstddidhlgnrrlrsvgellqnqfriglsrmervvrermtiqdldvvtpqalinirpvaaaikeffgssqlsqFmdqtnplaelthkrrlsalgpgglsreRagfevrdvhhshygrmcpietpegPnigligslstyarvneygfietpyrkvskeepgkvtneivyltadeedeyiiaqanepldeegrfisnkvvcrykeefievdpskidfmdvspkqivsvatsmipflenddanralmganmqrqavpliktespivgtgieyraardsgvvilaknpgvvekvtaneiiirtkdgkrdtykllkymrsnqgtcinqrpivkkgeeveagdviadgpstdngeialgknvlvgfmtwegynyedailiserlvkddvftsihieeyeaeardtklgpeditreipnvsedalkdlnsegiirigaevragdilvgkvtpkgeteltaeerllraifgekarevrdtslrvphgesgivvdvkiftrengdelapgvnklvrvyvaqkrkisvgdkmagrhgnkgvisrilpvedmpflpdgtpldivlnplgvpsrmnigqvlevhlgyaakalgwkvatpvfdgateedivqtlrkaglaedgksilydgrtgepfenrvtvgymymlklahlvddkiharstgpyslvtqqplggkaqfggqrfgemevwaleaygaaytlqeiltvksddvvgrvktyeaivkgenvpepgipesfkvlikelqslcldvkvyseeqee >8i23_CDF: title=CLOSTRIDIUM THERMOCELLUM RNA POLYMERASE TRANSCRIPTION OPEN COMPLEX WITH SIGI1 AND ITS PROMOTER organism=? DNA sequence DG(P79):DA(O67) DA(P80):DG(O66) DT(P81):DG(O65) DC(P82):DG(O64) DA(P83):DA(O63) DT(P84):DA(O62) DT(P85):DG(O61) DC(P86):DT(O60) DT(P87):DC(O59) DC(P88):DA(O58) DC(P89):DT(O57) DC(P90):DC(O56) DT(P91):DT(O55) DA(P92):DA(O54) DG(P93):DA(O53) DC(P98):DT(O52) DT(P99):DG(O51) DA(P100):DA(O50) DA(P101):DA(O49) DC(P106):DG(O48) DG(P107):DC(O47) DT(P108):DA(O46) DA(P109):DT(O45) DT(P110):DA(O44) DA(P111):DT(O43) DC(P112):DG(O42) DA(P113):DT(O41) DT(P114):DA(O40) DC(P115):DG(O39) DG(P117):DC(O37) DC(P118):DG(O36) DT(P119):DA(O35) DT(P120):DA(O34) DT(P121):DA(O33) DT(P122):DA(O32) DT(P123):DA(O31) DT(P124):DA(O30) DT(P125):DA(O29) DG(P126):DC(O28) DT(P127):DA(O27) DG(P128):DC(O26) DT(P129):DA(O25) DA(P130):DT(O24) DT(P131):DA(O23) DA(P132):DT(O22) DT(P133):DA(O21) DT(P134):DA(O20) DA(P135):DT(O19) chainC (130) ARG131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) TRP168 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) ARG240 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) GLU243 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (490) PHE491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (518) ARG519 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (543) PRO544 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (768) THR793 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (769) ALA794 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 3) TYR20 0 0 0 0 0 0 0 0 0 0 0 0 0 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) GLU44 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) TYR45 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) PRO47 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) LEU50 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) SER54 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 43) TYR60 0 0 0 0 0 0 0 0 0 37 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ILE61 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) THR63 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) GLU78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LYS82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) PHE83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 67) ASP84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) LYS87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) TYR89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) ASN90 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) PHE94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) ARG101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ILE104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ASP105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ARG108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) PHE120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) PHE121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ASP122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) TYR125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) HIS173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 (188) ARG205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 (198) HIS215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 15 2 0 0 0 0 0 0 (200) ARG217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 7 13 0 0 0 0 0 (201) THR218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 prot.sequence vhpvklgrnvrmsyskidevidmpnlieiqknsyeqflkegfkevfkdvnpitdytgnlilefvdysldeppkysvdeckerdatyaaplkvkvrlinketgevkeqeifmgdfplmtetgtfiingaeRvivsqlvrspgiyyamkidkagkqlfsntvipnrgaWleyetdsndvlsvridrtrklpltvlvralgygtdleitelfgederilatiqkdstkteeeglleiykrlRpgEpptvesakallhglffdpkrydlakpgrfkfnkklsiaarihgfiagenikdpdtgeiivaegetisrekaetiqnagvntvilrvdgknvkvigndmvdikryvdfdpkeiginekvkrdvlmeileeykgkgddaikkalqeriddlipkhitkediissisyiiglsygigstddidhlgnrrlrsvgellqnqfriglsrmervvrermtiqdldvvtpqalinirpvaaaikeffgssqlsqFmdqtnplaelthkrrlsalgpgglsreRagfevrdvhhshygrmcpietpegPnigligslstyarvneygfietpyrkvskeepgkvtneivyltadeedeyiiaqanepldeegrfisnkvvcrykeefievdpskidfmdvspkqivsvatsmipflenddanralmganmqrqavpliktespivgtgieyraardsgvvilaknpgvvekvtaneiiirtkdgkrdtykllkymrsnqgtcinqrpivkkgeeveagdviadgpstdngeialgknvlvgfmtwegynyedailiserlvkddvftsihieeyeaeardtklgpeditreipnvsedalkdlnsegiirigaevragdilvgkvtpkgeteltaeerllraifgekarevrdtslrvphgesgivvdvkiftrengdelapgvnklvrvyvaqkrkisvgdkmagrhgnkgvisrilpvedmpflpdgtpldivlnplgvpsrmnigqvlevhlgyaakalgwkvatpvfdgateedivqtlrkaglaedgksilydgrtgepfenrvtvgymymlklahlvddkiharstgpyslvtqqplggkaqfggqrfgemevwaleaygaaytlqeiltvksddvvgrvktyeaivkgenvpepgipesfkvlikelqslcldvkvyseeqee/elnnfdsiriglaspekirewsrgevkkpetinyrtlkperdglfcerifgpqkdwechcgkykrirykgivcdrcgvevtrskvrrermghielaapvshiwyfkgipsrmgllldmspralekilyfaayvvidpgqtplskkqilsekeyrdslekfgpkfragmgaeavrellqeinldelsaelreeikqstgqkrvraikrlevveafrqsqnkpewmildvipvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlldlgapdiivrnekrmlqeavdalidngrrgrpvtgpgnrplkslsdmlkgkqgrfrqnllgkrvdysgrsvivvgpelkiyqcglpkemalelfkpfvmkklvndglahniksakrmvervrnevwdvleevikehpvllnraptlhrlgiqafepvlvegralklhplvctaynadfdgdqmaihvplsaeaqaearflmlsannllkpqdgkpvavptqdmvlgsyyltilkegakgegrvftsmdeavmaydngeielhskikvrmkrvvdgvekskiiettlgrlifneaipqdlgfvdrsdpdkifdlevdflvgknelkkiidksikvhgttktailldkikelgfkystkgaitisisdmvipevkakyiketeekiekitkqykrglisdeerynsviaawteasenitralinnldrfnpvymmsqsgargninqikqlagmrglmadtsgktiefpikanfregltvmeffisthgarkgladtalrTAdsgyltrrlvdvsqdvivretdcgtrkgievtdikdgnevieelseriigrypvgnivhpetgeiiveagrmitdqdaekivkagikkvrirsvltchseygvcakcyganlatgeecnvgeavgiiaaqsigepgtqltmrtgeditqglprveelfearkpkglaiiseikgtvkisetkkkreivvtsedgetrsylipygsrikvsdgdqveagdeltegsvnphdilkikgveavqtylvhevqkvyrmqgvdindkhievivrqmlrkvkvedpgdtsllpgglvdvfdfeeenakaiaegkkpavakrallgitkaalatdsflsaasfqettrvlteaaikgkvdplvglkenviigklipagtgmsrykditistv/ivYddfistlrqikegnhqlreefisEYkPfiLkvtSnatgkYIdTrnsdefsialsafnEaidKFDieKgYNfflFseqVirRRlIDysRsnkddkeypfsFFDdeYfynnekllsksyigfediearedieelkkklqefgitfldlvlnvpkHrdsrqlcirlakmlaedeqmynalmknknipRnelkkkakvHgRTignnrkyiialclifrsnlnlskryleyy >8i24_CDF: title=CLOSTRIDIUM THERMOCELLUM RNA POLYMERASE TRANSCRIPTION OPEN COMPLEX WITH SIGI6 AND ITS PROMOTER organism=? DNA sequence DA(P78):DT(O70) DA(P79):DG(O69) DT(P80):DG(O68) DT(P81):DG(O67) DT(P82):DG(O66) DC(P83):DA(O65) DA(P84):DA(O64) DC(P85):DT(O63) DC(P86):DA(O62) DC(P87):DA(O61) DC(P88):DG(O60) DT(P89):DA(O59) DT(P90):DA(O58) DA(P91):DT(O57) DT(P92):DA(O56) DA(P93):DT(O55) DG(P94):DA(O54) DA(P95):DG(O53) DT(P99):DC(O52) DA(P100):DT(O51) DG(P101):DA(O50) DA(P103):DA(O49) DC(P106):DG(O48) DG(P107):DC(O47) DT(P108):DA(O46) DA(P109):DT(O45) DT(P110):DA(O44) DA(P111):DT(O43) DC(P112):DG(O42) DC(P113):DG(O41) DG(P114):DC(O40) DG(P115):DC(O39) DA(P116):DT(O38) DA(P117):DT(O37) DT(P118):DA(O36) DG(P119):DC(O35) DG(P120):DC(O34) DT(P121):DA(O33) DT(P122):DA(O32) DT(P123):DA(O31) DA(P125):DT(O29) DT(P126):DA(O28) DG(P127):DC(O27) DT(P128):DA(O26) DC(P129):DG(O25) DG(P130):DC(O24) DC(P131):DG(O23) DA(P132):DT(O22) DT(P133):DA(O21) DT(P134):DA(O20) DG(P135):DC(O19) chainC (130) ARG131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) TRP168 0 0 0 0 0 0 0 0 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (183) ASP184 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (239) ARG240 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (243) PRO244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (484) SER485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (518) ARG519 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (543) PRO544 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (106) ILE133 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) GLN224 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG326 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (766) THR793 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (767) ALA794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 3) THR15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ILE18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ILE19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) PHE41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) PHE44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) LEU46 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) TYR50 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) HIS56 0 0 0 0 0 0 0 0 0 0 0 0 43 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) VAL57 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLU74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ALA78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ASP80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LYS83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) HIS84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) SER85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LEU88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) PHE90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLN93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) VAL94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ILE100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ASP101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) HIS107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) TYR113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) TYR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) PHE118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (201) SER213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (202) ARG214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 6 0 0 0 (203) ARG215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 12 22 0 0 0 0 0 (206) GLU218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 0 0 0 0 (207) ARG219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 prot.sequence vhpvklgrnvrmsyskidevidmpnlieiqknsyeqflkegfkevfkdvnpitdytgnlilefvdysldeppkysvdeckerdatyaaplkvkvrlinketgevkeqeifmgdfplmtetgtfiingaeRvivsqlvrspgiyyamkidkagkqlfsntvipnrgaWleyetdsndvlsvriDrtrklpltvlvralgygtdleitelfgederilatiqkdstkteeeglleiykrlRpgePptvesakallhglffdpkrydlakpgrfkfnkklsiaarihgfiagenikdpdtgeiivaegetisrekaetiqnagvntvilrvdgknvkvigndmvdikryvdfdpkeiginekvkrdvlmeileeykgkgddaikkalqeriddlipkhitkediissisyiiglsygigstddidhlgnrrlrsvgellqnqfriglsrmervvrermtiqdldvvtpqalinirpvaaaikeffgSsqlsqfmdqtnplaelthkrrlsalgpgglsreRagfevrdvhhshygrmcpietpegPnigligslstyarvneygfietpyrkvskeepgkvtneivyltadeedeyiiaqanepldeegrfisnkvvcrykeefievdpskidfmdvspkqivsvatsmipflenddanralmganmqrqavpliktespivgtgieyraardsgvvilaknpgvvekvtaneiiirtkdgkrdtykllkymrsnqgtcinqrpivkkgeeveagdviadgpstdngeialgknvlvgfmtwegynyedailiserlvkddvftsihieeyeaeardtklgpeditreipnvsedalkdlnsegiirigaevragdilvgkvtpkgeteltaeerllraifgekarevrdtslrvphgesgivvdvkiftrengdelapgvnklvrvyvaqkrkisvgdkmagrhgnkgvisrilpvedmpflpdgtpldivlnplgvpsrmnigqvlevhlgyaakalgwkvatpvfdgateedivqtlrkaglaedgksilydgrtgepfenrvtvgymymlklahlvddkiharstgpyslvtqqplggkaqfggqrfgemevwaleaygaaytlqeiltvksddvvgrvktyeaivkgenvpepgipesfkvlikelqslcldvkvyseeqee/nnfdsiriglaspekirewsrgevkkpetinyrtlkperdglfcerifgpqkdwechcgkykrirykgivcdrcgvevtrskvrrermghielaapvshiwyfkgIpsrmgllldmspralekilyfaayvvidpgqtplskkqilsekeyrdslekfgpkfragmgaeavrellqeinldelsaelreeikqstgQkrvraikrlevveafrqsqnkpewmildvipvippelrpmvqldggrfatsdlndlyrrvinrnnrlkrlldlgapdiivrnekrmlqeavdalidngrrgRpvtgpgnrplkslsdmlkgkqgrfrqnllgkrvdysgrsvivvgpelkiyqcglpkemalelfkpfvmkklvndglahniksakrmvervrnevwdvleevikehpvllnraptlhrlgiqafepvlvegralklhplvctaynadfdgdqmaihvplsaeaqaearflmlsannllkpqdgkpvavptqdmvlgsyyltilkegakgegrvftsmdeavmaydngeielhskikvrmkrvvdgvekskiiettlgrlifneaipqdlgfvdrsdpdkifdlevdflvgknelkkiidksikvhgttktailldkikelgfkystkgaitisisdmvipevkakyiketeekiekitkqykrglisdeerynsviaawteasenitralinnldrfnpvymmsqsgargninqikqlagmrglmadtsgktiefpikanfregltvmeffisthgarkgladtalrTAdsgyltrrlvdvsqdvivretdcgtrkgievtdikdgnevieelseriigrypvgnivhpetgeiiveagrmitdqdaekivkagikkvrirsvltchseygvcakcyganlatgeecnvgeavgiiaaqsigepgtqltmrtgeditqglprveelfearkpkglaiiseikgtvkisetkkkreivvtsedgetrsylipygsrikvsdgdqveagdeltegsvnphdilkikgveavqtylvhevqkvyrmqgvdindkhievivrqmlrkvkvedpgdtsllpgglvdvfdfeeenakaiaegkkpavakrallgitkaalatdsflsaasfqettrvlteaaikgkvdplvglkenviigklipagtgmsrykditistv/ehTKrIIieylnrikagddsareefilRFrPFiLklvYkatdrHVepenseeysvallafnEainAyDeeKHSNfLvFseQVinRRlIDykRknHknkmvYpfsYFenediklertlsdadgnnaierleftdeirlfkselasfditfkdllsstpkHrdsrelliniakkiasndglyeklkktkklptlellklakvSRRtiERnkkyiiavslilrsnleifkeyaagi >8i24_F:Sigma2_domain_of_RNA_polymerase_sigma_factors; title=CLOSTRIDIUM THERMOCELLUM RNA POLYMERASE TRANSCRIPTION OPEN COMPLEX WITH SIGI6 AND ITS PROMOTER organism=? DNA sequence DA(P78):DT(O70) DA(P79):DG(O69) DT(P80):DG(O68) DT(P81):DG(O67) DT(P82):DG(O66) DC(P83):DA(O65) DA(P84):DA(O64) DC(P85):DT(O63) DC(P86):DA(O62) DC(P87):DA(O61) DC(P88):DG(O60) DT(P89):DA(O59) DT(P90):DA(O58) DA(P91):DT(O57) DT(P92):DA(O56) DA(P93):DT(O55) DG(P94):DA(O54) DA(P95):DG(O53) DT(P99):DC(O52) DA(P100):DT(O51) DG(P101):DA(O50) DA(P103):DA(O49) DC(P106):DG(O48) DG(P107):DC(O47) DT(P108):DA(O46) DA(P109):DT(O45) DT(P110):DA(O44) DA(P111):DT(O43) DC(P112):DG(O42) DC(P113):DG(O41) DG(P114):DC(O40) DG(P115):DC(O39) DA(P116):DT(O38) DA(P117):DT(O37) DT(P118):DA(O36) DG(P119):DC(O35) DG(P120):DC(O34) DT(P121):DA(O33) DT(P122):DA(O32) DT(P123):DA(O31) DA(P125):DT(O29) DT(P126):DA(O28) DG(P127):DC(O27) DT(P128):DA(O26) DC(P129):DG(O25) DG(P130):DC(O24) DC(P131):DG(O23) DA(P132):DT(O22) DT(P133):DA(O21) DT(P134):DA(O20) DG(P135):DC(O19) chainF ( 3) THR15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) LYS16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ILE18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) ILE19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) PHE41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) PRO43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) PHE44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) LEU46 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) TYR50 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) HIS56 0 0 0 0 0 0 0 0 0 0 0 0 43 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) VAL57 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) GLU74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ALA78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 68) ASP80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) LYS83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) HIS84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 73) SER85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) ASN86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) LEU88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) PHE90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLN93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) VAL94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 85) ARG97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 12 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ILE100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 89) ASP101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 95) HIS107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) TYR113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) TYR117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) PHE118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (159) HIS171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (201) SER213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (202) ARG214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 6 0 0 0 (203) ARG215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 12 22 0 0 0 0 0 (206) GLU218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 0 0 0 0 (207) ARG219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 prot.sequence ehTKrIIieylnrikagddsareefilRFrPFiLklvYkatdrHVepenseeysvallafnEainAyDeeKHSNfLvFseQVinRRlIDykRknHknkmvYpfsYFenediklertlsdadgnnaierleftdeirlfkselasfditfkdllsstpkHrdsrelliniakkiasndglyeklkktkklptlellklakvSRRtiERnkkyiiavslilrsnleifkeyaagi >8i54_A: title=LB2CAS12A RNA DNA COMPLEX organism=? DNA sequence DT(C1):DA(D-1) DA(C2):DT(D-2) DA(C3):DT(D-3) DA(C4):DT(D-4) DG(C5):DC(D-5) DC(C6):DG(D-6) DA(C7):DT(D-7) DC(C8):DG(D-8) DT(C9):DA(D-9) chainA (145) TYR147 0 1 0 2 0 0 0 0 0 (146) THR148 0 0 0 1 0 0 0 0 0 (428) LYS518 0 0 1 2 0 0 0 0 0 (477) PRO567 0 2 0 0 0 0 0 0 0 (478) VAL568 0 5 0 0 0 0 0 0 0 (481) GLN571 33 0 0 0 0 0 0 0 0 (482) MET572 4 0 5 0 0 0 0 0 0 (485) LYS575 4 0 0 5 2 0 0 0 0 (632) GLU722 2 0 0 0 0 0 0 0 0 prot.sequence yesltkqypvsktirnelipigktldnirqnnilesdvkrkqnyehvkgildeyhkqlinealdnctlpslkiaaeiylknqkevsdredfnktqdllrkevveklkahenftkigkkdildlleklpsiseddynalesfrnfYTyftsynkvrenlysdkeksstvayrlinenfpkfldnvksyrfvktagiladglgeeeqdslfivetfnktltqdgidtynsqvgkinssinlynqknqkangfrkipkmkmlykqilsdreesfidefqsdevlidnvesyvkndlaktamsnivfenwrtfddllnqeydlanenkkkddscnlienyihqisddienilaknrkavkaikdfldsikvlerelklinssgqelekvelkqvdslynmtrnyltkkpfstekvklnfnrstllngwdrnKetdnlgvlllkdgkyylgimntsankafvnppvaktekvfkkvdykllPVpnQMlpKvffaksnidfynpsseiysnykkgthkkgnmfsledchnlidffkesiskhedwskfgfkfsdtasyndisefyrevekqgykltytdidetyindliernelylfqiynkdfsmyskgklnlhtlyfmmlfdqrniddvvyklngEaevfyrpasisedeliihkageeiknknpnrartketstfsydivkdkryskdkftlhipitmnfgvdevkrfndavnsairidenvnvigidrgernllyvvvidskgnileqislnsiinkeydietdyhalldereggrdkarkdwntvenirdlkagylsqvvnvvaklvlkynaiicledlnfgfkrgrqkvekqvyqkfekmlidklnyidksreqtspkelggalnalqltskfksfkelgkqsgviyyvpayltskidpttgfanlfymkcenvekskrffdgfdfirfnalenvfefgfdyrsftqracginskwtvctngeriikyrnpdknnmfdekvvvvtdemknlfeqykipyedgrnvkdmiisneeaefyrrlyrllqqtlqmrnstsdgtrdyiispvknkreayfnselsdgsvpkdadangayniarkglwvleqirqksegekinlamtnaewleyaqthl >8i6k_A:HIN-2000_domain-like; title=STRUCTURE OF HMNDA HIN WITH DSDNA organism=? DNA sequence DG(B1):DC(C12) DG(B2):DC(C11) DC(B3):DG(C10) DG(B4):DC(C9) DC(B5):DG(C8) DG(B6):DC(C7) DC(B7):DG(C6) DG(B8):DC(C5) DC(B9):DG(C4) DG(B10):DC(C3) DC(B11):DG(C2) DC(B12):DG(C1) chainA ( 50) ARG262 0 0 0 0 0 0 0 0 10 0 0 0 prot.sequence dpvtvvvlkatapfkyesgkstmfhatvasktqyfhvkvfdinlkekfvRkkvitisdyseckgvmeikeassvsdfnqnfevpnriieianktpkisqlykqasgtmvyglfmlqkksvhkkntiyeiqdntgsmdvvgsgkwhnikcekgdklrlfclqlrtvdrklklvcgshsfikvik >8i87_AB:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF TIR-APAZ/AGO-GRNA-DNA COMPLEX organism=? DNA sequence DA(J2) DT(J3) DA(J4) DC(J5) DA(J6) DA(J7) DC(J8) DC(J9) DT(J10) DA(J11) DC(J12) DT(J13) DA(J14) DC(J15) DC(J16) DT(J17) DC(J18) DA(J19) chainA (260) ARG263 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (355) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (359) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 chainB (205) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (208) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 (211) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 (288) TYR328 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemeekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkenydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8i87_CD:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF TIR-APAZ/AGO-GRNA-DNA COMPLEX organism=? DNA sequence DA(K2) DT(K3) DA(K4) DC(K5) DA(K6) DA(K7) DC(K8) DC(K9) DT(K10) DA(K11) DC(K12) DT(K13) DA(K14) DC(K15) DC(K16) DT(K17) DC(K18) chainC (261) ARG263 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 (356) HIS358 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 (360) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 chainD (290) TYR328 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (397) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence nkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemeekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvnydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfskieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8i87_FG:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF TIR-APAZ/AGO-GRNA-DNA COMPLEX organism=? DNA sequence DT(E1) DA(E2) DT(E3) DA(E4) DC(E5) DA(E6) DA(E7) DC(E8) DC(E9) DT(E10) DA(E11) DC(E12) DT(E13) DA(E14) DC(E15) DC(E16) DT(E17) DC(E18) DA(E19) chainF (205) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (208) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 (211) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 (288) TYR328 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainG (253) ARG263 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (352) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 prot.sequence mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkenydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi/rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemeekvfvsnepvkfkgnvsyni >8i87_G:Toll/Interleukin_receptor_TIR_domain; title=CRYO-EM STRUCTURE OF TIR-APAZ/AGO-GRNA-DNA COMPLEX organism=? DNA sequence DT(E1) DA(E2) DT(E3) DA(E4) DC(E5) DA(E6) DA(E7) DC(E8) DC(E9) DT(E10) DA(E11) DC(E12) DT(E13) DA(E14) DC(E15) DC(E16) DT(E17) DC(E18) DA(E19) chainG (253) ARG263 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (352) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemeekvfvsnepvkfkgnvsyni >8i87_OT:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF TIR-APAZ/AGO-GRNA-DNA COMPLEX organism=? DNA sequence DA(U2) DT(U3) DA(U4) DC(U5) DA(U6) DA(U7) DC(U8) DC(U9) DT(U10) DA(U11) DC(U12) DT(U13) DA(U14) DC(U15) DC(U16) DT(U17) DC(U18) chainO (261) ARG263 0 0 1 8 1 0 0 0 0 0 0 0 0 0 0 0 0 (356) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (360) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 chainT ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (249) LYS287 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (290) TYR328 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (397) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence nkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemeekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvnydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfskieghlawtistaafykaggkpwklsdvrngvcylglvykKveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ia3_AB: title=CRYSTAL STRUCTURE OF HUMAN USF2 BHLHLZ DOMAIN IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(C304):DC(D340) DA(C305):DT(D339) DC(C306):DG(D338) DG(C307):DC(D337) DG(C308):DC(D336) DG(C309):DC(D335) DC(C310):DG(D334) DA(C311):DT(D333) DC(C312):DG(D332) DG(C313):DC(D331) DT(C314):DA(D330) DG(C315):DC(D329) DA(C316):DT(D328) DC(C317):DG(D327) DG(C318):DC(D326) DC(C319):DG(D325) chainA ( 5) HIS240 0 0 0 0 0 0 0 0 0 0 6 6 8 3 0 0 ( 6) ASN241 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 8) VAL243 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 9) GLU244 0 0 0 0 0 0 0 0 0 2 7 11 4 0 0 0 ( 12) ARG247 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 ( 13) ARG248 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 chainB ( 5) HIS240 0 0 0 0 4 8 5 5 0 0 0 0 0 0 0 0 ( 6) ASN241 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 8) VAL243 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 ( 9) GLU244 0 0 0 0 0 2 8 9 2 0 0 0 0 0 0 0 ( 12) ARG247 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 ( 13) ARG248 0 0 0 0 0 0 0 0 3 10 0 0 0 0 0 0 prot.sequence rraqHNeVErrRRdkinnwivqlskiipdcnadnsktgaskggilskacdyirelrqtnqrmqetfkeaerlqmdnellrqqieelknenallraqlqqhnlemvgeg/rraqHNeVErrRRdkinnwivqlskiipdcnadnsktgaskggilskacdyirelrqtnqrmqetfkeaerlqmdnellrqqieelknenallraqlqqh >8ia3_B:HLH,_helix-loop-helix_DNA-binding_domain;Leucine_zipper_domain; title=CRYSTAL STRUCTURE OF HUMAN USF2 BHLHLZ DOMAIN IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(D325):DC(C319) DC(D326):DG(C318) DG(D327):DC(C317) DT(D328):DA(C316) DC(D329):DG(C315) DA(D330):DT(C314) DC(D331):DG(C313) DG(D332):DC(C312) DT(D333):DA(C311) DG(D334):DC(C310) DC(D335):DG(C309) DC(D336):DG(C308) DC(D337):DG(C307) DG(D338):DC(C306) DT(D339):DA(C305) DC(D340):DG(C304) chainB ( 5) HIS240 0 0 0 0 0 0 0 0 5 5 8 4 0 0 0 0 ( 6) ASN241 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 8) VAL243 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 9) GLU244 0 0 0 0 0 0 0 2 9 8 2 0 0 0 0 0 ( 12) ARG247 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 13) ARG248 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 prot.sequence rraqHNeVErrRRdkinnwivqlskiipdcnadnsktgaskggilskacdyirelrqtnqrmqetfkeaerlqmdnellrqqieelknenallraqlqqh >8ia3_EF: title=CRYSTAL STRUCTURE OF HUMAN USF2 BHLHLZ DOMAIN IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(H323):DC(G321) DC(H324):DG(G320) DG(H325):DC(G319) DC(H326):DG(G318) DG(H327):DC(G317) DT(H328):DA(G316) DC(H329):DG(G315) DA(H330):DT(G314) DC(H331):DG(G313) DG(H332):DC(G312) DT(H333):DA(G311) DG(H334):DC(G310) DC(H335):DG(G309) DC(H336):DG(G308) DC(H337):DG(G307) DG(H338):DC(G306) DT(H339):DA(G305) DC(H340):DG(G304) chainE ( 5) HIS240 0 0 0 0 6 4 4 1 0 0 0 0 0 0 0 0 0 0 ( 6) ASN241 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 ( 8) VAL243 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) GLU244 0 0 0 0 0 4 12 5 0 0 0 0 0 0 0 0 0 0 ( 12) ARG247 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 ( 13) ARG248 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 chainF ( 4) GLN239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 5) HIS240 0 0 0 0 0 0 0 0 0 0 6 3 5 4 0 0 0 0 ( 6) ASN241 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 8) VAL243 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 9) GLU244 0 0 0 0 0 0 0 0 0 4 10 7 0 0 0 0 0 0 ( 12) ARG247 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 13) ARG248 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 prot.sequence rraqHNeVErrRRdkinnwivqlskiipdcnadnsktgaskggilskacdyirelrqtnqrmqetfkeaerlqmdnellrqqieelknenallraqlqqhnlemvgegtrq/rraQHNeVErrRRdkinnwivqlskiipdcnadnsktgaskggilskacdyirelrqtnqrmqetfkeaerlqmdnellrqqieelknenallraqlqqhnlem >8ibw_C:DNA/RNA_polymerases; title=STRUCTURE OF R2 WITH 3'UTR AND DNA IN BINDING STATE organism=? DNA sequence DT(B20):DA(A41) DT(B21):DA(A40) DA(B22):DT(A39) DA(B23):DT(A38) DG(B24):DC(A37) DA(B25):DT(A36) DG(B26):DC(A35) DA(B27):DT(A34) DG(B28):DC(A33) DT(B29):DA(A32) DC(B30):DG(A31) DA(B31):DT(A30) DT(B32):DA(A29) DA(B33):DT(A28) DG(B34):DC(A27) DT(B35):DA(A26) DT(B36):DA(A25) DA(B37):DT(A24) DC(B38):DG(A23) DT(B39):DA(A22) DC(B40):DG(A21) DC(B41):DG(A20) DC(B42):DG(A19) DG(B43):DC(A18) DC(B44):DG(A17) DC(B45):DG(A16) DG(B46):DC(A15) DT(B47):DA(A14) DT(B48):DA(A13) DT(B49):DA(A12) DA(B50):DT(A11) DC(B51):DG(A10) DC(B52):DG(A9) DC(B53):DG(A8) DG(B54):DC(A7) DC(B55):DG(A6) DG(B56):DC(A5) DC(B57):DG(A4) DT(B58):DA(A3) DT(B59):DA(A2) DG(B60):DC(A1) chainC ( 15) ARG125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) LYS149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLU191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 13 0 0 0 0 0 0 0 0 0 ( 84) LYS194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 ( 88) ARG198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 0 0 0 0 0 0 0 0 (488) HIS673 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (490) LYS675 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gwtcqfcertfstnRglgvhkrrahpvetntdaapmmvKrRwhgeeidllartearllaergqcsggdlfgalpgfgrtlEaiKgqrRrepyralvqahlarfgsspdaarvlsellegagrrracramtsrqkrraeyarvqelykkcrsraaaevidgacggvghsleemetywrpilervsdapgptpealhalgrtqlwkpisveeikasrfdwrtspgpdgirsgqwravpvhlkaemfnawmargeipeilrqcrtvfvpkverpggpgeyrpisiasiplrhfhsilarrllaccppdarqrgficadgtlensavldavlgdsrkklrechvavldfakafdtvshealvellrlrgmpeqfcgyiahlydtasttlavnnemsspvkvgrgvrqgdplspilfnvvmdlilaslpervgyrlemelvsalayaydlvllagskvgmqesisavdcvgrqmglrlncrksavlsmipdgHrKkhhyltertfniggkplrqvscverwrylgvdfeasgcvtlehsissalnnisraplkpqqrleilrahliprfqhgfvlgnisddrlrmldvqirkavgqwlrlpadvpkayyhaavqdgglaipsvratipdlivrrfggldsspwsvaraaaksdkirkklrwawkqlrrfsrvdsttqrpsvrlfwrehlhasvdgrelrestrtptstkwirercaqitgrdfvqfvhthinalpsrirgsrgrrgggessltcragckvrettahilqqchrthggrilrhnkivsfvakameenkwtveleprlrtsvglrkpaiiasrdgvgvivdvqvvsgqrsldelhrekrnkygnhgelvelvagrlglpkaecvratsctiswrgvwsltsykelrsiiglreptlqivpilalrgshmnwtrfnqmts >8ibx_C:DNA/RNA_polymerases; title=STRUCTURE OF R2 WITH 3'UTR AND DNA IN UNWINDING STATE organism=? DNA sequence DC(A1):DG(B60) DA(A2):DT(B59) DA(A3):DT(B58) DG(A4):DC(B57) DC(A5):DG(B56) DG(A6):DC(B55) DC(A7):DG(B54) DG(A8):DC(B53) DG(A9):DC(B52) DG(A10):DC(B51) DT(A11):DA(B50) DA(A12):DT(B49) DA(A13):DT(B48) DA(A14):DT(B47) DC(A15):DG(B46) DG(A16):DC(B45) DG(A17):DC(B44) DC(A18):DG(B43) DG(A19):DC(B42) DG(A20):DC(B41) DG(A21):DC(B40) DA(A22):DT(B39) DG(A23):DC(B38) DT(A24):DA(B37) DA(A25):DT(B36) DA(A26):DT(B35) DC(A27):DG(B34) DT(A28):DA(B33) DA(A29):DT(B32) DT(A30):DA(B31) chainC ( 15) ARG125 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 ( 19) VAL129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 39) LYS149 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) GLU191 0 0 0 0 0 0 0 0 0 10 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) LYS194 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 88) ARG198 0 0 0 0 0 0 0 0 2 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (488) HIS673 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 11 3 0 0 0 0 0 0 0 0 0 0 0 0 (490) LYS675 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 prot.sequence gwtcqfcertfstnRglgVhkrrahpvetntdaapmmvKrRwhgeeidllartearllaergqcsggdlfgalpgfgrtlEaiKgqrRrepyralvqahlarfgsspdaarvlsellegagrrracramtsrqkrraeyarvqelykkcrsraaaevidgacggvghsleemetywrpilervsdapgptpealhalgrtqlwkpisveeikasrfdwrtspgpdgirsgqwravpvhlkaemfnawmargeipeilrqcrtvfvpkverpggpgeyrpisiasiplrhfhsilarrllaccppdarqrgficadgtlensavldavlgdsrkklrechvavldfakafdtvshealvellrlrgmpeqfcgyiahlydtasttlavnnemsspvkvgrgvrqgdplspilfnvvmdlilaslpervgyrlemelvsalayaydlvllagskvgmqesisavdcvgrqmglrlncrksavlsmipdgHrKkhhyltertfniggkplrqvscverwrylgvdfeasgcvtlehsissalnnisraplkpqqrleilrahliprfqhgfvlgnisddrlrmldvqirkavgqwlrlpadvpkayyhaavqdgglaipsvratipdlivrrfggldsspwsvaraaaksdkirkklrwawkqlrrfsrvdsttqrpsvrlfwrehlhasvdgrelrestrtptstkwirercaqitgrdfvqfvhthinalpsrirgsrgrrgggessltcragckvrettahilqqchrthggrilrhnkivsfvakameenkwtveleprlrtsvglrkpaiiasrdgvgvivdvqvvsgqrsldelhrekrnkygnhgelvelvagrlglpkaecvratsctiswrgvwsltsykelrsiiglreptlqivpilalrgshmnwtrfnqmts >8ica_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND CACL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icb_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF ARTIFICIAL MOTHER LIQUOR organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 2 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA (NO 5'-PHOSPHATE) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8ice_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND CDCL2 (1 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 3 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icf_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (10 MILLIMOLAR) AND MGCL2 (50 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 0 1 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icg_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MGCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 3 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8ich_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND MGCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8ici_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND MGCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 2 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icj_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + THYMIDINE-5'- TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DTTP AND MGCL2 organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8ick_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR), MGCL2 (5 MILLIMOLAR), AND MNCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 3 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridiRlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icl_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND NICL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 1 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icm_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR), MNCL2 (5 MILLIMOLAR), AND AMMONIUM SULFATE (75 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 0 1 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icn_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF ATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8ico_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF AZT-TP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 0 1 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icp_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF OF DATP (0.1 MILLIMOLAR) AND MNCL2 (0.5 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 0 1 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icr_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8ics_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8ict_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icu_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DDATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 1 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icv_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 2 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icw_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icx_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 2 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icy_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + THYMIDINE-5'- TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DTTP AND MNCL2 organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8icz_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF OF DATP (1 MILLIMOLAR), MNCL2 (5 MILLIMOLAR), AND LITHIUM SULFATE (75 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >8ieg_CDEFGHKL:Histone-fold; title=BRE1(MRBD-RING)/RAD6-UB/NUCLEOSOME COMPLEX organism=? DNA sequence DC(J-73):DG(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainK ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 24) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa/phRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdNIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfg/aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg >8ieg_K:Histone-fold; title=BRE1(MRBD-RING)/RAD6-UB/NUCLEOSOME COMPLEX organism=? DNA sequence DC(J-73):DG(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainK ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger >8iej_CDEFGHKL: title=RNF20-RNF40/HRAD6A-UB/NUCLEOSOME COMPLEX organism=? DNA sequence DA(I-73):DT(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DT(I-59):DA(J59) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DA(I-55):DT(J55) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) HIS39 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL prot.sequence aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa/pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rDNIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfg/aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/lrdNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfg >8iej_K:Histone-fold; title=RNF20-RNF40/HRAD6A-UB/NUCLEOSOME COMPLEX organism=? DNA sequence DC(J-73):DG(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) DG(J72):DC(I-72) DT(J73):DA(I-73) chainK ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger >8ifo_A:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ESTROGEN RELATED RECEPTOR-GAMMA DNA BINDING DOMAIN COMPLEXED WITH PLA2G12B PROMOTER organism=Homo sapiens DNA sequence DG(C1):DC(D17) DA(C2):DT(D16) DG(C3):DC(D15) DG(C4):DC(D14) DA(C5):DT(D13) DC(C6):DG(D12) DA(C7):DT(D11) DA(C8):DT(D10) DA(C9):DT(D9) DG(C10):DC(D8) DG(C11):DC(D7) DT(C12):DA(D6) DG(C13):DC(D5) DA(C14):DT(D4) DA(C15):DT(D3) DA(C16):DT(D2) DC(C17):DG(D1) chainA ( 22) GLU146 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS149 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA150 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS153 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG154 0 0 0 0 0 6 13 0 0 0 0 0 0 0 0 0 0 prot.sequence krlclvcgdiasgyhygvascEacKAffKRtiqgnieyscpatneceitkrrrkscqacrfmkclkvgmlkegvRl >8ifo_AB:Glucocorticoid_receptor-like_DNA-binding_domain; title=CRYSTAL STRUCTURE OF ESTROGEN RELATED RECEPTOR-GAMMA DNA BINDING DOMAIN COMPLEXED WITH PLA2G12B PROMOTER organism=Homo sapiens DNA sequence DG(C1):DC(D17) DA(C2):DT(D16) DG(C3):DC(D15) DG(C4):DC(D14) DA(C5):DT(D13) DC(C6):DG(D12) DA(C7):DT(D11) DA(C8):DT(D10) DA(C9):DT(D9) DG(C10):DC(D8) DG(C11):DC(D7) DT(C12):DA(D6) DG(C13):DC(D5) DA(C14):DT(D4) DA(C15):DT(D3) DA(C16):DT(D2) DC(C17):DG(D1) chainA ( 22) GLU146 0 0 1 5 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) LYS149 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ALA150 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 ( 29) LYS153 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 30) ARG154 0 0 0 0 0 6 13 0 0 0 0 0 0 0 0 0 0 chainB ( 23) GLU146 0 0 0 0 0 0 0 0 0 2 8 3 0 0 0 0 0 ( 26) LYS149 0 0 0 0 0 0 0 0 2 7 1 0 0 0 0 0 0 ( 27) ALA150 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 ( 30) LYS153 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 ( 31) ARG154 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 prot.sequence krlclvcgdiasgyhygvascEacKAffKRtiqgnieyscpatneceitkrrrkscqacrfmkclkvgmlkegvRl/pkrlclvcgdiasgyhygvascEacKAffKRtiqgnieyscpatneceitkrrrkscqacrfmkclkvgmlkegvrldrv >8igr_ACDGIJL:Insert_subdomain_of_RNA_polymerase_alpha_subunit;C-terminal_domain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators;Translation_proteins_SH3-like_domain;Ribosomal_protein_S3_C-terminal_domain;Prokaryotic_type_KH_domain_KH-domain_type_II; title=CRYO-EM STRUCTURE OF CII-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX organism=? DNA sequence DC(N17):DG(T69) DC(N18):DG(T68) DT(N19):DA(T67) DC(N20):DG(T66) DG(N21):DC(T65) DT(N22):DA(T64) DT(N23):DA(T63) DG(N24):DC(T62) DC(N25):DG(T61) DG(N26):DC(T60) DT(N27):DA(T59) DT(N28):DA(T58) DT(N29):DA(T57) DG(N30):DC(T56) DT(N31):DA(T55) DT(N32):DA(T54) DT(N33):DA(T53) DG(N34):DC(T52) DC(N35):DG(T51) DA(N36):DT(T50) DC(N37):DG(T49) DG(N38):DC(T48) DA(N39):DT(T47) DA(N40):DT(T46) DC(N41):DG(T45) DC(N42):DG(T44) DA(N43):DT(T43) DT(N44):DA(T42) DA(N45):DT(T41) DT(N46):DA(T40) DG(N47):DC(T39) DT(N48):DA(T38) DA(N49):DT(T37) DA(N50):DT(T36) DG(N51):DC(T35) DT(N52):DA(T34) DA(N53):DT(T33) DT(N54):DA(T32) DT(N55):DA(T31) DT(N56):DA(T30) DC(N57):DG(T29) DC(N58):DG(T28) DT(N59):DA(T27) DT(N60):DA(T26) DA(N61):DT(T25) DG(N62):DC(T24) DA(N63):DT(T23) DT(N64):DA(T22) DA(N65):DT(T21) DA(N66):DT(T20) DC(N67):DG(T19) DA(N68):DT(T18) DA(N69):DT(T17) DT(N70):DA(T16) DT(N71):DA(T15) DG(N72):DC(T14) DA(N73):DT(T13) DT(N74):DA(T12) DT(N75):DA(T11) DG(N76):DC(T10) DA(N77):DT(T9) chainG (243) ARG265 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (138) ASN139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (252) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) ILE445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) ARG451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (375) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (381) LYS503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (382) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (386) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (416) LEU538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (420) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (425) VAL547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1089) GLN1264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ (197) THR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainL ( 7) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 8) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 83) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 84) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) PHE401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (117) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (118) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (121) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (123) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (126) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (127) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (135) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (138) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 12 5 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) ALA444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (152) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ARG468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (203) ILE505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (211) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (215) SER517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) LEU519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) THR583 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (282) ARG584 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (283) GLU585 0 0 0 0 0 0 0 0 0 0 9 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) ARG586 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (286) ARG588 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) GLN589 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 30) ASP36 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) LYS37 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) SER38 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) GLN39 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) SER41 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) ARG42 0 0 0 0 0 0 10 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 21) THR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ASP36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LYS37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD prot.sequence rnealriesallnkiamlgtektaeavgvDKSQiSRwkrdwipkfsmllavlewgvvdddmarlarqvaailtn/krnealriesallnkiamlgTEktaeavgvDKSQiSRwkrdwipkfsmllavlewgvvdddmarlarqvaailt/nealriesallnkiamlgteKTaeavgvdkSQISrWKrdwipkfsmllavlewgvvdddmarlarqvaail/teflkprlvdieqvssthakvtleplergfghtlgnalrrillssmpgcavteveidgvlheystkegvqedileillnlkglavrvqgkdeviltlnksgigpvtaadithdgdveivkpqhvichltdenasismrikvqrgrgyvpastrihseederpigrllvdacyspveriaynveaarveqrtdldklviemetngtidpeeairraatilaeqleafvdlillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslg/vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfviNgtervivsqlhRspgvffdsdkgkthssgkvlynariipyrgsWldfefdpkdnlfvriDRrrklpatiilralnytteqildlfyisetlrvdptndrlsalveiyrmmRpgEpptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddIdhlgnRrirsvgemaenqfrvglvRveravkerlslgdldtlmpqdminakPisaavKEffgSsqlsqfmdqnnplseithkrrisalgpggLtreRagfeVrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqillkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaQfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraPtlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqlglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/grttdpVRmyMreMgtveLltregeidiakriedginqvqcsvaeypeaitylleqydrveamsigeakarrakkemveaNlRLvisiakkytNrglqFldliqegniglmkavdkFEyrRgYkfSTYaTWWirQaiTRsiAdqartiripVHmiEtinklnRisRqmlqemgreptpeelaermlmpedkirkvlkiakepIsmetpigDdedShLgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvTRERiRQieakalrklrhpsrsevlrsfl >8igr_C:lambda_repressor-like_DNA-binding_domains; title=CRYO-EM STRUCTURE OF CII-DEPENDENT TRANSCRIPTION ACTIVATION COMPLEX organism=? DNA sequence DT(T9):DA(N77) DC(T10):DG(N76) DA(T11):DT(N75) DA(T12):DT(N74) DT(T13):DA(N73) DC(T14):DG(N72) DA(T15):DT(N71) DA(T16):DT(N70) DT(T17):DA(N69) DT(T18):DA(N68) DG(T19):DC(N67) DT(T20):DA(N66) DT(T21):DA(N65) DA(T22):DT(N64) DT(T23):DA(N63) DC(T24):DG(N62) DT(T25):DA(N61) DA(T26):DT(N60) DA(T27):DT(N59) DG(T28):DC(N58) DG(T29):DC(N57) DA(T30):DT(N56) DA(T31):DT(N55) DA(T32):DT(N54) DT(T33):DA(N53) DA(T34):DT(N52) DC(T35):DG(N51) DT(T36):DA(N50) DT(T37):DA(N49) DA(T38):DT(N48) DC(T39):DG(N47) DA(T40):DT(N46) DT(T41):DA(N45) DA(T42):DT(N44) DT(T43):DA(N43) DG(T44):DC(N42) DG(T45):DC(N41) DT(T46):DA(N40) DT(T47):DA(N39) DC(T48):DG(N38) DG(T49):DC(N37) DT(T50):DA(N36) DG(T51):DC(N35) DC(T52):DG(N34) DA(T53):DT(N33) DA(T54):DT(N32) DA(T55):DT(N31) DC(T56):DG(N30) DA(T57):DT(N29) DA(T58):DT(N28) DA(T59):DT(N27) DC(T60):DG(N26) DG(T61):DC(N25) DC(T62):DG(N24) DA(T63):DT(N23) DA(T64):DT(N22) DC(T65):DG(N21) DG(T66):DC(N20) DA(T67):DT(N19) DG(T68):DC(N18) DG(T69):DC(N17) chainC ( 21) THR26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) ASP36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LYS37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) SER38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) GLN39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 36) SER41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence krnealriesallnkiamlgTEktaeavgvDKSQiSRwkrdwipkfsmllavlewgvvdddmarlarqvaailt >8igs_IJL:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=CRYO-EM STRUCTURE OF RNAP-PROMOTER OPEN COMPLEX AT LAMBDA PROMOTER PRE organism=? DNA sequence DC(N25):DG(T61) DG(N26):DC(T60) DT(N27):DA(T59) DT(N28):DA(T58) DT(N29):DA(T57) DG(N30):DC(T56) DT(N31):DA(T55) DT(N32):DA(T54) DT(N33):DA(T53) DG(N34):DC(T52) DC(N35):DG(T51) DA(N36):DT(T50) DC(N37):DG(T49) DG(N38):DC(T48) DA(N39):DT(T47) DA(N40):DT(T46) DC(N41):DG(T45) DC(N42):DG(T44) DA(N43):DT(T43) DT(N44):DA(T42) DA(N45):DT(T41) DT(N46):DA(T40) DG(N47):DC(T39) DT(N48):DA(T38) DA(N50):DT(T37) DA(N63):DT(T23) DT(N64):DA(T22) DA(N65):DT(T21) DA(N66):DT(T20) DC(N67):DG(T19) DA(N68):DT(T18) DA(N69):DT(T17) DT(N70):DA(T16) DT(N71):DA(T15) DG(N72):DC(T14) DA(N73):DT(T13) chainI (420) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 0 0 0 0 chainJ (197) THR212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainL (117) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (118) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (121) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 (123) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (128) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 (132) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (135) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 4 0 0 0 0 0 0 0 0 0 0 0 (138) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (139) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 5 0 0 0 0 0 0 0 0 0 0 0 0 (152) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 (283) GLU585 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) ARG586 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) GLN589 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgswldfefdpkdnlfvridrrrklpatiilralnytteqildlfyisetlrvdptndrlsalveiyrmmrpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqillkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnseTkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgraitgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqlglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraa/grttdpvrmymremgtvelltregeidiakriedginqvqcsvaeypeaitylleqydrveamsigeakarrakkemveanlrlvisiakkytnrglqfldliqegniglmkavdkFEyrRgYkfstYatwWirQaiTRsiadqartiripVHmiEtinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtrERirQieakalrklrhpsrsevlrsfl >8igs_L:Sigma2_domain_of_RNA_polymerase_sigma_factors;Sigma3_and_sigma4_domains_of_RNA_polymerase_sigma_factors; title=CRYO-EM STRUCTURE OF RNAP-PROMOTER OPEN COMPLEX AT LAMBDA PROMOTER PRE organism=? DNA sequence DC(N25):DG(T61) DG(N26):DC(T60) DT(N27):DA(T59) DT(N28):DA(T58) DT(N29):DA(T57) DG(N30):DC(T56) DT(N31):DA(T55) DT(N32):DA(T54) DT(N33):DA(T53) DG(N34):DC(T52) DC(N35):DG(T51) DA(N36):DT(T50) DC(N37):DG(T49) DG(N38):DC(T48) DA(N39):DT(T47) DA(N40):DT(T46) DC(N41):DG(T45) DC(N42):DG(T44) DA(N43):DT(T43) DT(N44):DA(T42) DA(N45):DT(T41) DT(N46):DA(T40) DG(N47):DC(T39) DT(N48):DA(T38) DA(N50):DT(T37) DA(N63):DT(T23) DT(N64):DA(T22) DA(N65):DT(T21) DA(N66):DT(T20) DC(N67):DG(T19) DA(N68):DT(T18) DA(N69):DT(T17) DT(N70):DA(T16) DT(N71):DA(T15) DG(N72):DC(T14) DA(N73):DT(T13) chainL (117) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (118) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (121) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 (123) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 (128) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 (132) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (135) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 4 0 0 0 0 0 0 0 0 0 0 0 (138) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (139) ARG441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 12 5 0 0 0 0 0 0 0 0 0 0 0 0 (152) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) GLU458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 (283) GLU585 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (284) ARG586 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (287) GLN589 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence grttdpvrmymremgtvelltregeidiakriedginqvqcsvaeypeaitylleqydrveamsigeakarrakkemveanlrlvisiakkytnrglqfldliqegniglmkavdkFEyrRgYkfstYatwWirQaiTRsiadqartiripVHmiEtinklnrisrqmlqemgreptpeelaermlmpedkirkvlkiakepismetpigddedshlgdfiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtrERirQieakalrklrhpsrsevlrsfl >8in8_B: title=CRYO-EM STRUCTURE OF THE TARGET SSDNA-BOUND SIR2-APAZ/AGO-GRNA QUATERNARY COMPLEX organism=? DNA sequence DA(J-3) DA(J-2) DC(J-1) DG(J0) DA(J1) DC(J2) DG(J3) DT(J4) DC(J5) DT(J6) DA(J7) DA(J8) DG(J9) DA(J10) DA(J11) DA(J12) DC(J13) DC(J14) DA(J15) DT(J16) DT(J17) DA(J18) DA(J19) chainB ( 85) THR415 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) PHE416 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sfpalrtnalpvvtqsircgvvtltfselkerisqkspkalltytekvlflggepeirkifsndeinsigqyyideiaqsvaasTFlksfveeailtallrekpilhrvrhrthyavipnasakddrfldlrkavgfkgdlgyitgnvtnakelswaeavsirleerggklwimlkpeiwikpldrreeatdfirsrrryrfnqcsyqildawikilfgsiggggtvniscfpdaefkaefeigtrtafslgvg >8in8_BC:Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF THE TARGET SSDNA-BOUND SIR2-APAZ/AGO-GRNA QUATERNARY COMPLEX organism=? DNA sequence DA(J-3) DA(J-2) DC(J-1) DG(J0) DA(J1) DC(J2) DG(J3) DT(J4) DC(J5) DT(J6) DA(J7) DA(J8) DG(J9) DA(J10) DA(J11) DA(J12) DC(J13) DC(J14) DA(J15) DT(J16) DT(J17) DA(J18) DA(J19) chainB ( 85) THR415 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 86) PHE416 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 76) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 77) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 79) ASN82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 80) TYR83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 81) TYR84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (187) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 (391) VAL394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (393) LYS396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (396) ALA399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (397) LEU400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 prot.sequence sfpalrtnalpvvtqsircgvvtltfselkerisqkspkalltytekvlflggepeirkifsndeinsigqyyideiaqsvaasTFlksfveeailtallrekpilhrvrhrthyavipnasakddrfldlrkavgfkgdlgyitgnvtnakelswaeavsirleerggklwimlkpeiwikpldrreeatdfirsrrryrfnqcsyqildawikilfgsiggggtvniscfpdaefkaefeigtrtafslgvg/nlsqlaahstipeplllfkdnrtdthplrglsqygpysacfnlpgqvrlaylaptehmrkldaivrelqnpatpkEAtNYYveyggfekvfkvplvmpqehlrclaldechgvaangnglaladkivqsmsglfrqkhafdvllvylpaswkkcfeydgfdlhdrikakvaplnlpiqiindtaltRqcranvmwgvsvalyakaggipwkladwdkdeayiglsyaikknaegqeyttccsqvfdpdgtgfefvaydtrefitdrkgnpylsyqemqsvlskslhlyqsshngrmprkifihktthftedeiqgafdsfsssteielvqiiqstnwyglkvdgkkgdkpvapasypvdrglyqpltesecllwtqgsvmgvnqqnpgqpVfKeaALtplpnpimlrrfsgnggwhatcssilaltkvdwnnntlykklpvtlvysqvfadvvkqtpeivneiydyrffm >8in8_C:Ribonuclease_H-like; title=CRYO-EM STRUCTURE OF THE TARGET SSDNA-BOUND SIR2-APAZ/AGO-GRNA QUATERNARY COMPLEX organism=? DNA sequence DA(J-3) DA(J-2) DC(J-1) DG(J0) DA(J1) DC(J2) DG(J3) DT(J4) DC(J5) DT(J6) DA(J7) DA(J8) DG(J9) DA(J10) DA(J11) DA(J12) DC(J13) DC(J14) DA(J15) DT(J16) DT(J17) DA(J18) DA(J19) chainC ( 76) GLU79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 77) ALA80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 ( 79) ASN82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 80) TYR83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 ( 81) TYR84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (187) ARG190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 (391) VAL394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (393) LYS396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (396) ALA399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (397) LEU400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 prot.sequence nlsqlaahstipeplllfkdnrtdthplrglsqygpysacfnlpgqvrlaylaptehmrkldaivrelqnpatpkEAtNYYveyggfekvfkvplvmpqehlrclaldechgvaangnglaladkivqsmsglfrqkhafdvllvylpaswkkcfeydgfdlhdrikakvaplnlpiqiindtaltRqcranvmwgvsvalyakaggipwkladwdkdeayiglsyaikknaegqeyttccsqvfdpdgtgfefvaydtrefitdrkgnpylsyqemqsvlskslhlyqsshngrmprkifihktthftedeiqgafdsfsssteielvqiiqstnwyglkvdgkkgdkpvapasypvdrglyqpltesecllwtqgsvmgvnqqnpgqpVfKeaALtplpnpimlrrfsgnggwhatcssilaltkvdwnnntlykklpvtlvysqvfadvvkqtpeivneiydyrffm >8iqi_ABCDEF:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF FULL-LENGTH ASFVPRIMPOL IN COMPLEX-FORM organism=? DNA sequence DT(G1) DT(G2) DT(G3) DT(G4) DT(G5) DT(G6) DT(G7) DT(G8) DT(G9) DT(G10) chainA (658) LYS675 0 0 0 0 0 1 0 0 0 0 chainB (657) LYS675 0 0 0 0 0 0 2 1 0 0 (702) ASN720 0 0 1 4 0 0 0 0 0 0 chainC (657) LYS675 0 0 0 0 0 0 0 3 0 0 (702) ASN720 0 0 0 0 2 0 0 0 0 0 chainD (657) LYS675 0 0 0 0 0 0 0 1 0 0 (702) ASN720 0 0 0 0 1 0 0 0 0 0 chainE (657) LYS675 0 0 0 0 0 0 0 0 1 0 (702) ASN720 0 0 0 0 0 1 0 0 0 0 chainF (657) LYS675 0 0 0 0 0 0 0 0 0 1 prot.sequence hdtiqltaqrkylaevqaletllarelsvfltepgskktniinritgktyalpstellrfyehleqcrkqgalmyflerqgtysglmldydlklntnaapslessvlsrlchrifvhiknssvlpegshkihffftlkpeavqgkygfhvlipglkmaastkksiiaslqhdatvqkilheqgvanpescldphsasvpsllygssklnhrpyqlktgfelvfdssdpdyipihqikniesynlvselsltneqgslvrpvycaadpaddhslsilmlhdpearylhkilnllppeyyveyplwsnvvfalantsanyrplaewfsqkcpekwntggkekleklwndasrhtekkitkrsimywahkhapqqykeiveqgyfsilaeyvysyngtlehymiakviyammgnkfvvdvdsngkyvwfefvlpgqpmnqgeiwkwrkevnpdelhiyisenfsrvmdritehikyhlsqphetnilnyykkllkaferskskifndsfkkgvirqaeflfrqrsfiqtldtnpyllgvgngvlsietipaklinhfhehpihqythicyepfnpenpwtklllnalqdiipeldarlwimfylstaifrglkealmllwlgggcngktflmrlvamvlgdhyasklnislltsyretaeKpnsafmrlkgrgygyfeetnkseilntsrlkemvnpgdvtarelnqkqesfqmtatmvaasnynfiidttdhgtwrrlrhyrskvkfchnpdpnnsyekkedprfiheyimdpncqnaffsilvyfweklqkeyngqikkvfcptieseteayrksqdtlhrfitervvespsaetvynlsevvtayaewynaninvkrhialelsqelensvlekylqwspnktrilkgcrilhkfetlqpgcepknkwwewspnp/hdtiqltaqrkylaevqaletllarelsvfltepgskktniinritgktyalpstellrfyehleqcrkqgalmyflerqgtysglmldydlklntnaapslessvlsrlchrifvhiknssvlpegshkihffftlkpeavqgkygfhvlipglkmaastkksiiaslqhdatvqkilheqgvanpescldphsasvpsllygssklnhrpyqlktgfelvfdssdpdyipihqikniesynlvselsltneqgslvrpvycaadaddhslsilmlhdpearylhkilnllppeyyveyplwsnvvfalantsanyrplaewfsqkcpekwntggkekleklwndasrhtekkitkrsimywahkhapqqykeiveqgyfsilaeyvysyngtlehymiakviyammgnkfvvdvdsngkyvwfefvlpgqpmnqgeiwkwrkevnpdelhiyisenfsrvmdritehikyhlsqphetnilnyykkllkaferskskifndsfkkgvirqaeflfrqrsfiqtldtnpyllgvgngvlsietipaklinhfhehpihqythicyepfnpenpwtklllnalqdiipeldarlwimfylstaifrglkealmllwlgggcngktflmrlvamvlgdhyasklnislltsyretaeKpnsafmrlkgrgygyfeetnkseilntsrlkemvnpgdvtarelNqkqesfqmtatmvaasnynfiidttdhgtwrrlrhyrskvkfchnpdpnnsyekkedprfiheyimdpncqnaffsilvyfweklqkeyngqikkvfcptieseteayrksqdtlhrfitervvespsaetvynlsevvtayaewynaninvkrhialelsqelensvlekylqwspnktrilkgcrilhkfetlqpgcepknkwwewspnps/hdtiqltaqrkylaevqaletllarelsvfltepgskktniinritgktyalpstellrfyehleqcrkqgalmyflerqgtysglmldydlklntnaapslessvlsrlchrifvhiknssvlpegshkihffftlkpeavqgkygfhvlipglkmaastkksiiaslqhdatvqkilheqgvanpescldphsasvpsllygssklnhrpyqlktgfelvfdssdpdyipihqikniesynlvselsltneqgslvrpvycaadaddhslsilmlhdpearylhkilnllppeyyveyplwsnvvfalantsanyrplaewfsqkcpekwntggkekleklwndasrhtekkitkrsimywahkhapqqykeiveqgyfsilaeyvysyngtlehymiakviyammgnkfvvdvdsngkyvwfefvlpgqpmnqgeiwkwrkevnpdelhiyisenfsrvmdritehikyhlsqphetnilnyykkllkaferskskifndsfkkgvirqaeflfrqrsfiqtldtnpyllgvgngvlsietipaklinhfhehpihqythicyepfnpenpwtklllnalqdiipeldarlwimfylstaifrglkealmllwlgggcngktflmrlvamvlgdhyasklnislltsyretaeKpnsafmrlkgrgygyfeetnkseilntsrlkemvnpgdvtarelNqkqesfqmtatmvaasnynfiidttdhgtwrrlrhyrskvkfchnpdpnnsyekkedprfiheyimdpncqnaffsilvyfweklqkeyngqikkvfcptieseteayrksqdtlhrfitervvespsaetvynlsevvtayaewynaninvkrhialelsqelensvlekylqwspnktrilkgcrilhkfetlqpgicepknkwwewspnps/hdtiqltaqrkylaevqaletllarelsvfltepgskktniinritgktyalpstellrfyehleqcrkqgalmyflerqgtysglmldydlklntnaapslessvlsrlchrifvhiknssvlpegshkihffftlkpeavqgkygfhvlipglkmaastkksiiaslqhdatvqkilheqgvanpescldphsasvpsllygssklnhrpyqlktgfelvfdssdpdyipihqikniesynlvselsltneqgslvrpvycaadaddhslsilmlhdpearylhkilnllppeyyveyplwsnvvfalantsanyrplaewfsqkcpekwntggkekleklwndasrhtekkitkrsimywahkhapqqykeiveqgyfsilaeyvysyngtlehymiakviyammgnkfvvdvdsngkyvwfefvlpgqpmnqgeiwkwrkevnpdelhiyisenfsrvmdritehikyhlsqphetnilnyykkllkaferskskifndsfkkgvirqaeflfrqrsfiqtldtnpyllgvgngvlsietipaklinhfhehpihqythicyepfnpenpwtklllnalqdiipeldarlwimfylstaifrglkealmllwlgggcngktflmrlvamvlgdhyasklnislltsyretaeKpnsafmrlkgrgygyfeetnkseilntsrlkemvnpgdvtarelNqkqesfqmtatmvaasnynfiidttdhgtwrrlrhyrskvkfchnpdpnnsyekkedprfiheyimdpncqnaffsilvyfweklqkeyngqikkvfcptieseteayrksqdtlhrfitervvespsaetvynlsevvtayaewynaninvkrhialelsqelensvlekylqwspnktrilkgcrilhkfetlqpgicepknkwwewspnps/hdtiqltaqrkylaevqaletllarelsvfltepgskktniinritgktyalpstellrfyehleqcrkqgalmyflerqgtysglmldydlklntnaapslessvlsrlchrifvhiknssvlpegshkihffftlkpeavqgkygfhvlipglkmaastkksiiaslqhdatvqkilheqgvanpescldphsasvpsllygssklnhrpyqlktgfelvfdssdpdyipihqikniesynlvselsltneqgslvrpvycaadaddhslsilmlhdpearylhkilnllppeyyveyplwsnvvfalantsanyrplaewfsqkcpekwntggkekleklwndasrhtekkitkrsimywahkhapqqykeiveqgyfsilaeyvysyngtlehymiakviyammgnkfvvdvdsngkyvwfefvlpgqpmnqgeiwkwrkevnpdelhiyisenfsrvmdritehikyhlsqphetnilnyykkllkaferskskifndsfkkgvirqaeflfrqrsfiqtldtnpyllgvgngvlsietipaklinhfhehpihqythicyepfnpenpwtklllnalqdiipeldarlwimfylstaifrglkealmllwlgggcngktflmrlvamvlgdhyasklnislltsyretaeKpnsafmrlkgrgygyfeetnkseilntsrlkemvnpgdvtarelNqkqesfqmtatmvaasnynfiidttdhgtwrrlrhyrskvkfchnpdpnnsyekkedprfiheyimdpncqnaffsilvyfweklqkeyngqikkvfcptieseteayrksqdtlhrfitervvespsaetvynlsevvtayaewynaninvkrhialelsqelensvlekylqwspnktrilkgcrilhkfetlqpgicepknkwwewspnps/hdtiqltaqrkylaevqaletllarelsvfltepgskktniinritgktyalpstellrfyehleqcrkqgalmyflerqgtysglmldydlklntnaapslessvlsrlchrifvhiknssvlpegshkihffftlkpeavqgkygfhvlipglkmaastkksiiaslqhdatvqkilheqgvanpescldphsasvpsllygssklnhrpyqlktgfelvfdssdpdyipihqikniesynlvselsltneqgslvrpvycaadaddhslsilmlhdpearylhkilnllppeyyveyplwsnvvfalantsanyrplaewfsqkcpekwntggkekleklwndasrhtekkitkrsimywahkhapqqykeiveqgyfsilaeyvysyngtlehymiakviyammgnkfvvdvdsngkyvwfefvlpgqpmnqgeiwkwrkevnpdelhiyisenfsrvmdritehikyhlsqphetnilnyykkllkaferskskifndsfkkgvirqaeflfrqrsfiqtldtnpyllgvgngvlsietipaklinhfhehpihqythicyepfnpenpwtklllnalqdiipeldarlwimfylstaifrglkealmllwlgggcngktflmrlvamvlgdhyasklnislltsyretaeKpnsafmrlkgrgygyfeetnkseilntsrlkemvnpgdvtareqesfqmtatmvaasnynfiidttdhgtwrrlrhyrskvkfchnpdpnnsyekkedprfiheyimdpncqnaffsilvyfweklqkeyngqikkvfcptieseteayrksqdtlhrfitervvespsaetvynlsevvtayaewynaninvkrhialelsqelensvlekylqwspnktrilkgcrilhkfetlqpgcepknkwwewspnp >8iqi_B:P-loop_containing_nucleoside_triphosphate_hydrolases; title=STRUCTURE OF FULL-LENGTH ASFVPRIMPOL IN COMPLEX-FORM organism=? DNA sequence DT(G1) DT(G2) DT(G3) DT(G4) DT(G5) DT(G6) DT(G7) DT(G8) DT(G9) DT(G10) chainB (657) LYS675 0 0 0 0 0 0 2 1 0 0 (702) ASN720 0 0 1 4 0 0 0 0 0 0 prot.sequence hdtiqltaqrkylaevqaletllarelsvfltepgskktniinritgktyalpstellrfyehleqcrkqgalmyflerqgtysglmldydlklntnaapslessvlsrlchrifvhiknssvlpegshkihffftlkpeavqgkygfhvlipglkmaastkksiiaslqhdatvqkilheqgvanpescldphsasvpsllygssklnhrpyqlktgfelvfdssdpdyipihqikniesynlvselsltneqgslvrpvycaadaddhslsilmlhdpearylhkilnllppeyyveyplwsnvvfalantsanyrplaewfsqkcpekwntggkekleklwndasrhtekkitkrsimywahkhapqqykeiveqgyfsilaeyvysyngtlehymiakviyammgnkfvvdvdsngkyvwfefvlpgqpmnqgeiwkwrkevnpdelhiyisenfsrvmdritehikyhlsqphetnilnyykkllkaferskskifndsfkkgvirqaeflfrqrsfiqtldtnpyllgvgngvlsietipaklinhfhehpihqythicyepfnpenpwtklllnalqdiipeldarlwimfylstaifrglkealmllwlgggcngktflmrlvamvlgdhyasklnislltsyretaeKpnsafmrlkgrgygyfeetnkseilntsrlkemvnpgdvtarelNqkqesfqmtatmvaasnynfiidttdhgtwrrlrhyrskvkfchnpdpnnsyekkedprfiheyimdpncqnaffsilvyfweklqkeyngqikkvfcptieseteayrksqdtlhrfitervvespsaetvynlsevvtayaewynaninvkrhialelsqelensvlekylqwspnktrilkgcrilhkfetlqpgcepknkwwewspnps >8isz_AB: title=CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA MONOMER organism=? DNA sequence DA(D22) DA(D23) DA(D24) DC(D25) DT(D26) DA(D27) DT(D28) DA(D29) DC(D30) DA(D31) DA(D32) DC(D33) DC(D34) DT(D35) DA(D36) DC(D37) DT(D38) DA(D39) DC(D40) DC(D41) DT(D42) DC(D43) DA(D44) DT(D45) chainA (320) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (349) SER391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (393) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainB (263) ARG263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (289) LYS289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 (434) ASN434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (435) ASN435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (438) GLU438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (439) ASP439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (442) ASP442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence mkeliyieepsilfahgqkctdprdglalfgplnqiygiksgvvgtqkglqifksyldkiqkpiynhnnitrpmfpgfeavfgckwesqnivfkeitdeeirrylfnasthkrtydlvtlfndkiitankndeervdvwfvivpeeiykycrpnsvlynydaqfhdqlkarllehtiptqilrestlawrdfkntfgapirdfskieghlawtistaayykaggkpwklgdirpgvcylglvykkieksknpqnaccaaqmfldngdgtvfkgevgpwynpekgeyhlkpkeakalltqalesykeqnksypkevfihaRtrfndeewnafnevtpkntnlvgvtitkSkplklyktegafpimrgnayivdekkaflwtlgfvpklqstlsMevpnpifieinkgeaeiqqvlkdilaltklnynaciyadgepvtlrfankigeiltasteiktpplafkyyi/mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqRlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrrkqgknwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvladiNNfeEDteDldeledie >8isz_B:Toll/Interleukin_receptor_TIR_domain; title=CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA MONOMER organism=? DNA sequence DA(D22) DA(D23) DA(D24) DC(D25) DT(D26) DA(D27) DT(D28) DA(D29) DC(D30) DA(D31) DA(D32) DC(D33) DC(D34) DT(D35) DA(D36) DC(D37) DT(D38) DA(D39) DC(D40) DC(D41) DT(D42) DC(D43) DA(D44) DT(D45) chainB (263) ARG263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (289) LYS289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 (434) ASN434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (435) ASN435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 (438) GLU438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (439) ASP439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (442) ASP442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqRlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrrkqgknwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvladiNNfeEDteDldeledie >8it0_AB: title=CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA DIMER (CONFORMATION-2) organism=? DNA sequence DA(D22) DA(D23) DA(D24) DC(D25) DT(D26) DA(D27) DT(D28) DA(D29) DC(D30) DA(D31) DA(D32) DC(D33) DC(D34) DT(D35) DA(D36) DC(D37) DT(D38) DA(D39) DC(D40) DC(D41) DT(D42) DC(D43) DA(D44) DT(D45) chainA chainB (289) LYS289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 (366) LYS366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (434) ASN434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 9 (435) ASN435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (439) ASP439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 (442) ASP442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence mkeliyieepsilfahgqkctdprdglalfgplnqiygiksgvvgtqkglqifksyldkiqkpiynhnnitrpmfpgfeavfgckwesqnivfkeitdeeirrylfnasthkrtydlvtlfndkiitankndeervdvwfvivpeeiykycrpnsvlynydaqfhdqlkarllehtiptqilrestlawrdfkntfgapirdfskieghlawtistaayykaggkpwklgdirpgvcylglvykkieksknpqnaccaaqmfldngdgtvfkgevgpwynpekgeyhlkpkeakalltqalesykeqnksypkevfihartrfndeewnafnevtpkntnlvgvtitkskplklyktegafpimrgnayivdekkaflwtlgfvpklqstlsmevpnpifieinkgeaeiqqvlkdilaltklnynaciyadgepvtlrfankigeiltasteiktpplafkyyi/mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqrlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrRkqgKnwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvladiNNfeeDteDldeledie >8it0_EF: title=CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA DIMER (CONFORMATION-2) organism=? DNA sequence DA(H44) DC(H43) DT(H42) DC(H41) DC(H40) DA(H39) DT(H38) DC(H37) DA(H22) DA(H23) DA(H24) DC(H25) DT(H26) DA(H27) DT(H28) DA(H29) DC(H30) DA(H31) DA(H32) DC(H33) DC(H34) DT(H35) DA(H36):DC(H37) chainE (349) SER391 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF (289) LYS289 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (358) HIS358 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (439) ASP439 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) THR440 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) ASP442 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkeliyieepsilfahgqkctdprdglalfgplnqiygiksgvvgtqkglqifksyldkiqkpiynhnnitrpmfpgfeavfgckwesqnivfkeitdeeirrylfnasthkrtydlvtlfndkiitankndeervdvwfvivpeeiykycrpnsvlynydaqfhdqlkarllehtiptqilrestlawrdfkntfgapirdfskieghlawtistaayykaggkpwklgdirpgvcylglvykkieksknpqnaccaaqmfldngdgtvfkgevgpwynpekgeyhlkpkeakalltqalesykeqnksypkevfihartrfndeewnafnevtpkntnlvgvtitkSkplklyktegafpimrgnayivdekkaflwtlgfvpklqstlsMevpnpifieinkgeaeiqqvlkdilaltklnynaciyadgepvtlrfankigeiltasteiktpplafkyyi/mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqrlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrRkqgknwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvladiNNfeEDTeDldeledie >8it1_AB: title=CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA TETRAMER (NADASE ACTIVE FORM) organism=? DNA sequence DA(C22) DA(C23) DA(C24) DC(C25) DT(C26) DA(C27) DT(C28) DA(C29) DC(C30) DA(C31) DA(C32) DC(C33) DC(C34) DT(C35) DA(C36) DC(C37) DT(C38) DA(C39) DC(C40) DC(C41) DT(C42) DC(C43) DA(C44) DT(C45) chainA (349) SER391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (393) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 chainB (263) ARG263 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 (289) LYS289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (434) ASN434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (435) ASN435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (439) ASP439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (442) ASP442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence mkeliyieepsilfahgqkctdprdglalfgplnqiygiksgvvgtqkglqifksyldkiqkpiynhnnitrpmfpgfeavfgckwesqnivfkeitdeeirrylfnasthkrtydlvtlfndkiitankndeervdvwfvivpeeiykycrpnsvlynydaqfhdqlkarllehtiptqilrestlawrdfkntfgapirdfskieghlawtistaayykaggkpwklgdirpgvcylglvykkieksknpqnaccaaqmfldngdgtvfkgevgpwynpekgeyhlkpkeakalltqalesykeqnksypkevfihartrfndeewnafnevtpkntnlvgvtitkSkplklyktegafpimrgnayivdekkaflwtlgfvpklqstlsMevpnpifieinkgeaeiqqvlkdilaltklnynaciyadgepvtlrfankigeiltasteiktpplafkyyi/mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqRlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrRkqgknwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvladiNNfeeDteDldeledie >8it1_EF: title=CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA TETRAMER (NADASE ACTIVE FORM) organism=? DNA sequence DA(G22) DA(G23) DA(G24) DC(G25) DT(G26) DA(G27) DT(G28) DA(G29) DC(G30) DA(G31) DA(G32) DC(G33) DC(G34) DT(G35) DA(G36) DC(G37) DT(G38) DA(G39) DC(G40) DC(G41) DT(G42) DC(G43) DA(G44) DT(G45) chainE (320) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 (349) SER391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 chainF (263) ARG263 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (289) LYS289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 (431) ALA431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (434) ASN434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (435) ASN435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (438) GLU438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 (442) ASP442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence mkeliyieepsilfahgqkctdprdglalfgplnqiygiksgvvgtqkglqifksyldkiqkpiynhnnitrpmfpgfeavfgckwesqnivfkeitdeeirrylfnasthkrtydlvtlfndkiitankndeervdvwfvivpeeiykycrpnsvlynydaqfhdqlkarllehtiptqilrestlawrdfkntfgapirdfskieghlawtistaayykaggkpwklgdirpgvcylglvykkieksknpqnaccaaqmfldngdgtvfkgevgpwynpekgeyhlkpkeakalltqalesykeqnksypkevfihaRtrfndeewnafnevtpkntnlvgvtitkSkplklyktegafpimrgnayivdekkaflwtlgfvpklqstlsmevpnpifieinkgeaeiqqvlkdilaltklnynaciyadgepvtlrfankigeiltasteiktpplafkyyi/mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqRlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrRkqgknwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvlAdiNNfeEdteDldeledie >8it1_IJ: title=CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA TETRAMER (NADASE ACTIVE FORM) organism=? DNA sequence DA(K22) DA(K23) DA(K24) DC(K25) DT(K26) DA(K27) DT(K28) DA(K29) DC(K30) DA(K31) DA(K32) DC(K33) DC(K34) DT(K35) DA(K36) DC(K37) DT(K38) DA(K39) DC(K40) DC(K41) DT(K42) DC(K43) DA(K44) DT(K45) chainI (393) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainJ (263) ARG263 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (289) LYS289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 2 (431) ALA431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (434) ASN434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (435) ASN435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (438) GLU438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 (440) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 (442) ASP442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 prot.sequence mkeliyieepsilfahgqkctdprdglalfgplnqiygiksgvvgtqkglqifksyldkiqkpiynhnnitrpmfpgfeavfgckwesqnivfkeitdeeirrylfnasthkrtydlvtlfndkiitankndeervdvwfvivpeeiykycrpnsvlynydaqfhdqlkarllehtiptqilrestlawrdfkntfgapirdfskieghlawtistaayykaggkpwklgdirpgvcylglvykkieksknpqnaccaaqmfldngdgtvfkgevgpwynpekgeyhlkpkeakalltqalesykeqnksypkevfihartrfndeewnafnevtpkntnlvgvtitkskplklyktegafpimrgnayivdekkaflwtlgfvpklqstlsMevpnpifieinkgeaeiqqvlkdilaltklnynaciyadgepvtlrfankigeiltasteiktpplafkyyi/mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqRlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrRkqgknwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvlAdiNNfeEdTeDldeledie >8it1_MN: title=CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA TETRAMER (NADASE ACTIVE FORM) organism=? DNA sequence DA(O22) DA(O23) DA(O24) DC(O25) DT(O26) DA(O27) DT(O28) DA(O29) DC(O30) DA(O31) DA(O32) DC(O33) DC(O34) DT(O35) DA(O36) DC(O37) DT(O38) DA(O39) DC(O40) DC(O41) DT(O42) DC(O43) DA(O44) DT(O45) chainM (349) SER391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 (393) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 chainN (289) LYS289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 (431) ALA431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (434) ASN434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (435) ASN435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (440) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (442) ASP442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence mkeliyieepsilfahgqkctdprdglalfgplnqiygiksgvvgtqkglqifksyldkiqkpiynhnnitrpmfpgfeavfgckwesqnivfkeitdeeirrylfnasthkrtydlvtlfndkiitankndeervdvwfvivpeeiykycrpnsvlynydaqfhdqlkarllehtiptqilrestlawrdfkntfgapirdfskieghlawtistaayykaggkpwklgdirpgvcylglvykkieksknpqnaccaaqmfldngdgtvfkgevgpwynpekgeyhlkpkeakalltqalesykeqnksypkevfihartrfndeewnafnevtpkntnlvgvtitkSkplklyktegafpimrgnayivdekkaflwtlgfvpklqstlsMevpnpifieinkgeaeiqqvlkdilaltklnynaciyadgepvtlrfankigeiltasteiktpplafkyyi/mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqrlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrRkqgknwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvlAdiNNfeedTeDldeledie >8it1_N:Toll/Interleukin_receptor_TIR_domain; title=CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA TETRAMER (NADASE ACTIVE FORM) organism=? DNA sequence DA(O22) DA(O23) DA(O24) DC(O25) DT(O26) DA(O27) DT(O28) DA(O29) DC(O30) DA(O31) DA(O32) DC(O33) DC(O34) DT(O35) DA(O36) DC(O37) DT(O38) DA(O39) DC(O40) DC(O41) DT(O42) DC(O43) DA(O44) DT(O45) chainN (289) LYS289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 (431) ALA431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (434) ASN434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (435) ASN435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (440) THR440 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (442) ASP442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqrlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrRkqgknwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvlAdiNNfeedTeDldeledie >8ity_P:"Winged_helix"_DNA-binding_domain; title=HUMAN RNA POLYMERASE III PRE-INITIATION COMPLEX CLOSED DNA 1 organism=? DNA sequence DA(X-70):DT(Y70) DT(X-69):DA(Y69) DA(X-68):DT(Y68) DT(X-67):DA(Y67) DG(X-66):DC(Y66) DC(X-65):DG(Y65) DT(X-64):DA(Y64) DT(X-63):DA(Y63) DA(X-62):DT(Y62) DC(X-61):DG(Y61) DC(X-60):DG(Y60) DG(X-59):DC(Y59) DT(X-58):DA(Y58) DA(X-57):DT(Y57) DA(X-56):DT(Y56) DC(X-55):DG(Y55) DT(X-54):DA(Y54) DT(X-53):DA(Y53) DG(X-52):DC(Y52) DA(X-51):DT(Y51) DA(X-50):DT(Y50) DA(X-49):DT(Y49) DG(X-48):DC(Y48) DT(X-47):DA(Y47) DA(X-46):DT(Y46) DT(X-45):DA(Y45) DT(X-44):DA(Y44) DT(X-43):DA(Y43) DC(X-42):DG(Y42) DG(X-41):DC(Y41) DA(X-40):DT(Y40) DT(X-39):DA(Y39) DT(X-38):DA(Y38) DT(X-37):DA(Y37) DC(X-36):DG(Y36) DT(X-35):DA(Y35) DT(X-34):DA(Y34) DG(X-33):DC(Y33) DG(X-32):DC(Y32) DC(X-31):DG(Y31) DT(X-30):DA(Y30) DT(X-29):DA(Y29) DT(X-28):DA(Y28) DA(X-27):DT(Y27) DT(X-26):DA(Y26) DA(X-25):DT(Y25) DT(X-24):DA(Y24) DA(X-23):DT(Y23) DT(X-22):DA(Y22) DC(X-21):DG(Y21) DT(X-20):DA(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DT(X-17):DA(Y17) DG(X-16):DC(Y16) DG(X-15):DC(Y15) DA(X-14):DT(Y14) DA(X-13):DT(Y13) DA(X-12):DT(Y12) DG(X-11):DC(Y11) DG(X-10):DC(Y10) DA(X-9):DT(Y9) DC(X-8):DG(Y8) DG(X-7):DC(Y7) DA(X-6):DT(Y6) DA(X-5):DT(Y5) DA(X-4):DT(Y4) DC(X-3):DG(Y3) DA(X-2):DT(Y2) DC(X-1):DG(Y1) DC(X0):DG(Y0) DG(X1):DC(Y-1) DT(X2):DA(Y-2) DG(X3):DC(Y-3) DC(X4):DG(Y-4) DT(X5):DA(Y-5) DC(X6):DG(Y-6) DG(X7):DC(Y-7) DC(X8):DG(Y-8) DT(X9):DA(Y-9) DT(X10):DA(Y-10) DC(X11):DG(Y-11) chainP ( 26) ARG110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkgsdnqeklvyqiiedagnkgiwsRdiryksnlplteinkilknleskklikavksvaaskkkvymlynlqpdrsvtggawysdqdfesefvevlnqqcfkflqskaetareskqnpmiqrnssfasshevwkyicelgiskvelsmedietilntliydgkvemtiiaakegtvgsvdghmklyravnpiipptglvrapcglcpvfddcheggeispsnciymtewlef >8ity_V:Cyclin-like;Zinc_beta-ribbon; title=HUMAN RNA POLYMERASE III PRE-INITIATION COMPLEX CLOSED DNA 1 organism=? DNA sequence DG(Y-11):DC(X11) DA(Y-10):DT(X10) DA(Y-9):DT(X9) DG(Y-8):DC(X8) DC(Y-7):DG(X7) DG(Y-6):DC(X6) DA(Y-5):DT(X5) DG(Y-4):DC(X4) DC(Y-3):DG(X3) DA(Y-2):DT(X2) DC(Y-1):DG(X1) DG(Y0):DC(X0) DG(Y1):DC(X-1) DT(Y2):DA(X-2) DG(Y3):DC(X-3) DT(Y4):DA(X-4) DT(Y5):DA(X-5) DT(Y6):DA(X-6) DC(Y7):DG(X-7) DG(Y8):DC(X-8) DT(Y9):DA(X-9) DC(Y10):DG(X-10) DC(Y11):DG(X-11) DT(Y12):DA(X-12) DT(Y13):DA(X-13) DT(Y14):DA(X-14) DC(Y15):DG(X-15) DC(Y16):DG(X-16) DA(Y17):DT(X-17) DC(Y18):DG(X-18) DA(Y19):DT(X-19) DA(Y20):DT(X-20) DG(Y21):DC(X-21) DA(Y22):DT(X-22) DT(Y23):DA(X-23) DA(Y24):DT(X-24) DT(Y25):DA(X-25) DA(Y26):DT(X-26) DT(Y27):DA(X-27) DA(Y28):DT(X-28) DA(Y29):DT(X-29) DA(Y30):DT(X-30) DG(Y31):DC(X-31) DC(Y32):DG(X-32) DC(Y33):DG(X-33) DA(Y34):DT(X-34) DA(Y35):DT(X-35) DG(Y36):DC(X-36) DA(Y37):DT(X-37) DA(Y38):DT(X-38) DA(Y39):DT(X-39) DT(Y40):DA(X-40) DC(Y41):DG(X-41) DG(Y42):DC(X-42) DA(Y43):DT(X-43) DA(Y44):DT(X-44) DA(Y45):DT(X-45) DT(Y46):DA(X-46) DA(Y47):DT(X-47) DC(Y48):DG(X-48) DT(Y49):DA(X-49) DT(Y50):DA(X-50) DT(Y51):DA(X-51) DC(Y52):DG(X-52) DA(Y53):DT(X-53) DA(Y54):DT(X-54) DG(Y55):DC(X-55) DT(Y56):DA(X-56) DT(Y57):DA(X-57) DA(Y58):DT(X-58) DC(Y59):DG(X-59) DG(Y60):DC(X-60) DG(Y61):DC(X-61) DT(Y62):DA(X-62) DA(Y63):DT(X-63) DA(Y64):DT(X-64) DG(Y65):DC(X-65) DC(Y66):DG(X-66) DA(Y67):DT(X-67) DT(Y68):DA(X-68) DA(Y69):DT(X-69) DT(Y70):DA(X-70) chainV (105) ARG110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) TYR260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rcpdcgstelvedshysqsqlvcsdcgcvvtegvltttfsdegnlrevtysrstgeneqvsrsqqrglrrvrdlcrvlqlpptfedtavayyqqayrhsgiraaRlqkkevlvgccvlitcrqhnwpltmgaictllyadldvfsstymqivkllgldvpslclaelvktycssfklfqaspsvpakyvedkekmlsrtmqlvelanetwlvtgrhplpvitaatflawqslqpadrlscslarfcklanvdlpYpassrlqellavllrmaeqlawlrvlrldkrsvvkhigdllqhrqslvrsafrdlllppcmlkspkricpvppvstvtgdenisdseieqylrtpqevrdfqraqa >8ity_W:Homeodomain-like; title=HUMAN RNA POLYMERASE III PRE-INITIATION COMPLEX CLOSED DNA 1 organism=? DNA sequence DA(X-70):DT(Y70) DT(X-69):DA(Y69) DA(X-68):DT(Y68) DT(X-67):DA(Y67) DG(X-66):DC(Y66) DC(X-65):DG(Y65) DT(X-64):DA(Y64) DT(X-63):DA(Y63) DA(X-62):DT(Y62) DC(X-61):DG(Y61) DC(X-60):DG(Y60) DG(X-59):DC(Y59) DT(X-58):DA(Y58) DA(X-57):DT(Y57) DA(X-56):DT(Y56) DC(X-55):DG(Y55) DT(X-54):DA(Y54) DT(X-53):DA(Y53) DG(X-52):DC(Y52) DA(X-51):DT(Y51) DA(X-50):DT(Y50) DA(X-49):DT(Y49) DG(X-48):DC(Y48) DT(X-47):DA(Y47) DA(X-46):DT(Y46) DT(X-45):DA(Y45) DT(X-44):DA(Y44) DT(X-43):DA(Y43) DC(X-42):DG(Y42) DG(X-41):DC(Y41) DA(X-40):DT(Y40) DT(X-39):DA(Y39) DT(X-38):DA(Y38) DT(X-37):DA(Y37) DC(X-36):DG(Y36) DT(X-35):DA(Y35) DT(X-34):DA(Y34) DG(X-33):DC(Y33) DG(X-32):DC(Y32) DC(X-31):DG(Y31) DT(X-30):DA(Y30) DT(X-29):DA(Y29) DT(X-28):DA(Y28) DA(X-27):DT(Y27) DT(X-26):DA(Y26) DA(X-25):DT(Y25) DT(X-24):DA(Y24) DA(X-23):DT(Y23) DT(X-22):DA(Y22) DC(X-21):DG(Y21) DT(X-20):DA(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DT(X-17):DA(Y17) DG(X-16):DC(Y16) DG(X-15):DC(Y15) DA(X-14):DT(Y14) DA(X-13):DT(Y13) DA(X-12):DT(Y12) DG(X-11):DC(Y11) DG(X-10):DC(Y10) DA(X-9):DT(Y9) DC(X-8):DG(Y8) DG(X-7):DC(Y7) DA(X-6):DT(Y6) DA(X-5):DT(Y5) DA(X-4):DT(Y4) DC(X-3):DG(Y3) DA(X-2):DT(Y2) DC(X-1):DG(Y1) DC(X0):DG(Y0) DG(X1):DC(Y-1) DT(X2):DA(Y-2) DG(X3):DC(Y-3) DC(X4):DG(Y-4) DT(X5):DA(Y-5) DC(X6):DG(Y-6) DG(X7):DC(Y-7) DC(X8):DG(Y-8) DT(X9):DA(Y-9) DT(X10):DA(Y-10) DC(X11):DG(Y-11) chainW ( 22) ARG295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ASN297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence cvveendpifergstttyssfRkNyyskpwsnketdmfflaismvgtdfsmigqlfphrarieiknkfkReektngwridkafqekrpfdfdffahllqkvlaeeekrkqk >8iue_34BEPUVW:TATA-box_binding_protein-like;Homeodomain-like;"Winged_helix"_DNA-binding_domain;Cyclin-like;Zinc_beta-ribbon; title=RNA POLYMERASE III PRE-INITIATION COMPLEX MELTING COMPLEX 1 organism=? DNA sequence DT(X-69):DA(Y69) DT(X-67):DA(Y67) DG(X-66):DG(Y65) DT(X-64):DA(Y64) DA(X-62):DT(Y62) DC(X-61):DG(Y61) DC(X-60):DG(Y60) DG(X-59):DC(Y59) DA(X-57):DA(Y58) DA(X-56):DT(Y57) DC(X-55):DT(Y56) DT(X-54):DG(Y55) DT(X-53):DA(Y53) DG(X-52):DC(Y52) DA(X-51):DT(Y51) DA(X-49):DT(Y49) DG(X-48):DC(Y48) DT(X-47):DA(Y47) DT(X-45):DA(Y45) DT(X-44):DA(Y44) DT(X-43):DA(Y43) DC(X-42):DG(Y42) DG(X-41):DC(Y41) DA(X-40):DT(Y40) DT(X-39):DA(Y39) DT(X-38):DA(Y38) DT(X-37):DA(Y37) DC(X-36):DG(Y36) DT(X-35):DA(Y35) DT(X-34):DA(Y34) DG(X-33):DC(Y33) DG(X-32):DC(Y32) DC(X-31):DG(Y31) DT(X-30):DA(Y30) DT(X-29):DA(Y29) DT(X-28):DA(Y28) DA(X-27):DT(Y27) DT(X-26):DA(Y26) DA(X-25):DT(Y25) DT(X-24):DA(Y24) DA(X-23):DT(Y23) DT(X-22):DA(Y22) DT(X-20):DG(Y21) DG(X-18):DA(Y19) DT(X-17):DA(Y17) DG(X-16):DC(Y16) DG(X-15):DC(Y15) DA(X-14):DT(Y14) DA(X-12):DT(Y13) DG(X-11):DC(Y11) DG(X-10):DG(Y-8) DA(X-9):DA(Y-9) DC(X-8):DA(Y-10) DG(X-7):DG(Y-11) DC(X8):DC(Y-12) DT(X9):DC(Y-13) DT(X10):DG(Y-14) DC(X11):DC(Y-16) DG(X12):DG(Y-17) chainB (280) TRP297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 (377) LYS394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 chainE chainP ( 97) ARG110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 14 1 0 0 0 0 0 0 0 0 chain3 (114) ARG151 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (156) HIS193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (158) HIS195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain4 (237) MET385 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (240) ILE388 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (241) TYR389 0 0 0 0 0 0 0 0 2 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) THR392 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (245) LYS393 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) TYR403 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (292) ARG440 0 0 0 0 0 0 0 1 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (293) ASP441 0 0 0 0 2 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (341) SER489 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (344) LEU492 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainU ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainV ( 62) ARG67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 6 5 0 0 0 0 0 0 0 0 0 0 (105) ARG110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) TYR260 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 13 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainW ( 22) ARG295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) ASN297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vsgsggcnfpeyelpelntrafhvgafgelwrgrlrgagdlslrepaadsdredaavardldcsleaaaelravcgldklkevipentdlvtlgvrkrflehreetitidracRqetfvyemeshaigkkpensadmieegelilsvnilypvifHkHkehkpyqtmlvlgsqkltqlrdsircvsdlqiggefsntpdqapehiskdlyksaffyfegtfyndkrypecrdlsrtiiewseshdrgygkfqtarmedftfndlciklgfpylychqgdcehvivitdirlvhhddcldrtlypllikkhwlwtrkcfvckmytarwvtnndsfapedpcffcdvcfrmlhydsegnklgeflaypyvdpgtfn/yfkdkvtgvgppanedtrekaaqgikafeellvtkwknwekallrksvvsdrlqrllqpkllkleylhqkqskvsselerqalekqgreaekeiqdinqlpeeallgnrldshdwekisninfegsrsaeeirkfwqnsehpsinkqewsreeeerlqaiaaahghlewqkiaeelgtsrsafqclqkfqqhnkalkrkewteeedrmltqlvqemrvgshipyrrivyymegrdsMqlIYrwTKsldpglkkgYwapeedakllqavakygeqdwfkireevpgrsdaqcRDrylrrlhfslkkgrwnlkeeeqlieliekygvghwakiaselphrsgSqcLskwkimmgkkqglrrrrrrar/apiptveekwrllpaflkvkglvkqhidsfnyfinveikkimkanekvtsdadpmwylkylniyvglpdveesfnvtrpvsphecrlrdmtysapitvdieytrgsqriirnalpigrmpimlrssncvltgktpaefaklnecpldpggyfivkgvekviliqeqlsknriiveadrkgavgasvtssthekksrtnmavkqgrfylrhntlsedipiviifkamgvesdqeivqmigteehvmaafgpsleecqkaqiftqmqalkyignkvrrqrmWgggpkktkieearellastilthvpvkefnfrakciytavmvrrvilaqgdnkvddrdyygnkrlelagqllsllfedlfkkfnsemkkiadqvipKqraaqfdvvkhmrqdqitngmvnaistgnwslkrfkmdrqgvtqvlsrlsyisalgmmtrissqfektrkvsgprslqpsqwgmlcpsdtpegeacglvknlalmthittdmedgpivklasnlgvedvnllcgeelsypnvflvflngnilgvirdhkklvntfrlmrragyinefvsistnltdrcvyissdggrlcrpyiivkkqkpavtnkhmeelaqgyrnfedflheslveyldvneendcnialyehtinkdtthleiepftllgvcaglipyphhnqsprntyqcamgkqamgtigynqrnridtlmyllaypqkpmvktktieliefeklpagqnatvavmsysgydiedalvlnkasldrgfgrclvyknakctlkrytnqtfdkvmgpmldaatrkpiwrheildadgicspgekvenkqvlvnksmptvtqqpqykdvpitykgatdsyiekvmissnaedaflikmllrqtrrpeigdkfssrhgqkgvcglivpqedmpfcdsgicpdiimnphgfpsrmtvgkliellagkagvldgrfhygtafggskvkdvcedlvrhgynylgkdyvtsgitgepleayiyfgpvyyqklkhmvldkmharargpravltrqptegrsrdgglrlgemerdcligygasmlllerlmissdafevdvcgqcgllgysgwchycksschvsslripyackllfqelqsmniiprlklskyn/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqsgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq/dpveienriielchqfphgitdqviqnemphieaqqravainrllsmgqldllrsntgllyrikdsqnagkmkgsdnqeklvyqiiedagnkgiwsRdiryksnlplteinkilknleskklikavksvaaskkkvymlynlqpdrsvtggawysdqdfesefvevlnqqcfkflqskaetareskqnpmiqrnssfasshevwkyicelgiskvelsmedietilntliydgkvemtiiaakegtvgsvdghmklyravnpiipptglvrapcglcpvfddcheggeispsnciymtewlef/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkg/rcpdcgstelvedshysqsqlvcsdcgcvvtegvltttfsdegnlrevtysrstgeneqvsRsqqrglrrvrdlcrvlqlpptfedtavayyqqayrhsgiraaRlqkkevlvgccvlitcrqhnwpltmgaictllyadldvfsstymqivkllgldvpslclaelvktycssfklfqaspsvpakyvedkekmlsrtmqlvelanetwlvtgrhplpvitaatflawqslqpadrlscslarfcklanvdlpYpassrlqellavllrmaeqlawlrvlrldkrsvvkhigdllqhrqslvrsafrdlllppcmlkspkricpvppvstvtgdenisdseieqylrtpqevrdfqraqa/cvveendpifergstttyssfRkNyyskpwsnketdmfflaismvgtdfsmigqlfphrarieiknkfkreektngwridkafqekrpfdfdffahllqkvlaeeekrkqk >8j0k_AB: title=CRYSTAL STRUCTURE OF HUMAN TFAP2A IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DC(C1):DG(D13) DT(C2):DA(D12) DG(C3):DC(D11) DC(C4):DG(D10) DC(C5):DG(D9) DT(C6):DA(D8) DC(C7):DG(D7) DG(C8):DC(D6) DG(C9):DC(D5) DG(C10):DC(D4) DC(C11):DG(D3) DA(C12):DT(D2) DC(C13):DG(D1) chainA ( 19) SER222 0 0 5 2 0 0 0 0 0 0 0 0 0 ( 53) ALA256 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 54) LYS257 0 0 0 0 0 0 0 0 8 12 12 0 0 chainB ( 19) SER222 0 0 0 0 0 0 0 0 0 3 5 0 0 ( 53) ALA256 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 54) LYS257 0 0 15 12 8 0 0 0 0 0 0 0 0 prot.sequence vvnpnevfcsvpgrlsllSstskykvtvaevqrrlsppeclnasllggvlrrAKsknggrslrekldkiglnlpagrrkaanvtlltslvegeavhlardfgyvcetefpakavaeflnrqhsdpneqvtrknmllatkqickeftdllaqdrsplgnsrpnpilepgiqsclthfnlishgfgspavcaavtalqnyltealkamdkmylsn/vvnpnevfcsvpgrlsllSstskykvtvaevqrrlsppeclnasllggvlrrAKsknggrslrekldkiglnlpagrrkaanvtlltslvegeavhlardfgyvcetefpakavaeflnrqhsdpneqvtrknmllatkqickeftdllaqdrsplgnsrpnpilepgiqsclthfnlishgfgspavcaavtalqnyltealkamdkm >8j0k_B: title=CRYSTAL STRUCTURE OF HUMAN TFAP2A IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(D1):DC(C13) DT(D2):DA(C12) DG(D3):DC(C11) DC(D4):DG(C10) DC(D5):DG(C9) DC(D6):DG(C8) DG(D7):DC(C7) DA(D8):DT(C6) DG(D9):DC(C5) DG(D10):DC(C4) DC(D11):DG(C3) DA(D12):DT(C2) DG(D13):DC(C1) chainB ( 19) SER222 0 0 5 3 0 0 0 0 0 0 0 0 0 ( 53) ALA256 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 54) LYS257 0 0 0 0 0 0 0 0 8 12 15 0 0 prot.sequence vvnpnevfcsvpgrlsllSstskykvtvaevqrrlsppeclnasllggvlrrAKsknggrslrekldkiglnlpagrrkaanvtlltslvegeavhlardfgyvcetefpakavaeflnrqhsdpneqvtrknmllatkqickeftdllaqdrsplgnsrpnpilepgiqsclthfnlishgfgspavcaavtalqnyltealkamdkm >8j0r_A: title=STRUCTURE OF HUMAN TFAP2A IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(D1):DC(C13) DT(D2):DA(C12) DG(D3):DC(C11) DC(D4):DG(C10) DC(D5):DG(C9) DT(D6):DA(C8) DG(D7):DC(C7) DA(D8):DT(C6) DG(D9):DC(C5) DG(D10):DC(C4) DC(D11):DG(C3) DA(D12):DT(C2) DG(D13):DC(C1) chainA ( 20) SER222 0 0 0 0 0 0 0 0 0 2 5 0 0 ( 54) ALA256 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 55) LYS257 0 0 13 12 8 0 0 0 0 0 0 0 0 prot.sequence gvvnpnevfcsvpgrlsllSstskykvtvaevqrrlsppeclnasllggvlrrAKsknggrslrekldkiglnlpagrrkaanvtlltslvegeavhlardfgyvcetefpakavaeflnrqhsdpneqvtrknmllatkqickeftdllaqdrsplgnsrpnpilepgiqsclthfnlishgfgspavcaavtalqnyltealkamdkmylsnn >8j0r_AB: title=STRUCTURE OF HUMAN TFAP2A IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DG(D1):DC(C13) DT(D2):DA(C12) DG(D3):DC(C11) DC(D4):DG(C10) DC(D5):DG(C9) DT(D6):DA(C8) DG(D7):DC(C7) DA(D8):DT(C6) DG(D9):DC(C5) DG(D10):DC(C4) DC(D11):DG(C3) DA(D12):DT(C2) DG(D13):DC(C1) chainA ( 20) SER222 0 0 0 0 0 0 0 0 0 2 5 0 0 ( 54) ALA256 0 0 0 0 1 2 0 0 0 0 0 0 0 ( 55) LYS257 0 0 13 12 8 0 0 0 0 0 0 0 0 chainB ( 18) SER222 0 0 5 2 0 0 0 0 0 0 0 0 0 ( 52) ALA256 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 53) LYS257 0 0 0 0 0 0 0 0 7 12 14 0 0 prot.sequence gvvnpnevfcsvpgrlsllSstskykvtvaevqrrlsppeclnasllggvlrrAKsknggrslrekldkiglnlpagrrkaanvtlltslvegeavhlardfgyvcetefpakavaeflnrqhsdpneqvtrknmllatkqickeftdllaqdrsplgnsrpnpilepgiqsclthfnlishgfgspavcaavtalqnyltealkamdkmylsnn/vnpnevfcsvpgrlsllSstskykvtvaevqrrlsppeclnasllggvlrrAKsknggrslrekldkiglnlpagrrkaanvtlltslvegeavhlardfgyvcetefpakavaeflnrqhsdpneqvtrknmllatkqickeftdllaqdrsplgnsrpnpilepgiqsclthfnlishgfgspavcaavtalqnyltealkamdkmy >8j12_B: title=CRYO-EM STRUCTURE OF THE ASCAS12F-SGRNA-TARGET DNA TERNARY COMPLEX organism=? DNA sequence DC(D1) DA(D2) DA(D3) DG(D4) DC(D5) DG(D6) DC(D7) DA(D8) DC(D9) DC(D10) DT(D11) DA(D12) DA(D13) DT(D14) DT(D15) DT(D16) DC(D17) DC(D18) DT(D19) DA(D20) DA(D21) DA(D22) DT(D23) DT(D24) DA(D25) DG(D26) DA(D27) DA(D28) chainB ( 3) LYS3 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR5 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (231) ALA241 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (232) ARG242 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence miKvYryeivkpldldwkefgtilrqlqqetrfalnkatqlawewmgfssdykdnlgytnvhgyayhtiktkayrlnsgnlsqtikratdrfkayqkeilrgdmsipsykrdipldlikenisvnrmnhgdyiaslsllsnpakqemnvkrkisviiivrgagktimdrilsgeyqvsasqiihddrknkwylnisydfepqtrvldlnkimgidlgvavavymafqhtpARykleggeienfrrqvesrrismlrqkpieqlrdkianfrdttnhrysryivdmaikegcgtiqmedldigsrflqnwtyydlqqkiiykaeeagikvikidpqytsqrcsecgnidgqaifkcracgyeanadynaarniaipnidkiiaesi >8j1j_B: title=CRYO-EM STRUCTURE OF THE ASCAS12F-YHAM-SGRNAS3-5V7-TARGET DNA organism=? DNA sequence DC(D1) DA(D2) DA(D3) DG(D4) DC(D5) DG(D6) DC(D7) DA(D8) DC(D9) DC(D10) DT(D11) DA(D12) DA(D13) DT(D14) DT(D15) DT(D16) DC(D17) DC(D18) DT(D19) DA(D20) DA(D21) DA(D22) DT(D23) DT(D24) DA(D25) DG(D26) DA(D27) DA(D28) chainB ( 3) LYS3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (234) PRO240 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) ALA241 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) ARG242 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence miKvyryeivkpldldwkefgtilrqlqqetrfalnkatqlawewmgyssdykdnhgeilgytnvhgyayhtiktkayrlnsgnlsqtikratdrfkayqkeilrgdmsipsykrdipldlikenisvnrmnhgdyiaslsllsnpakqemnvkrkisviiivrgagktimdrilsgeyqvhasqiihddrknkwylnisydfepqtrvldlnkimgidlgvavaaymafqhtPARykleggeienfrrqvesrrismlkpieqlrdkianfrdttnhrysryivdmaikmgcgtiqmedldigsrflqnwtyydlqqkiiykaeeagikvikidpqytsqrcsecgnidgqaifkcracgyeanadynaarniaipnidkiiaesi >8j3r_B: title=CRYO-EM STRUCTURE OF THE ASCAS12F-HKRA-SGRNAS3-5V7-TARGET DNA organism=? DNA sequence DA(D3) DG(D4) DC(D5) DG(D6) DC(D7) DG(D8) DC(D9) DC(D10) DT(D11) DA(D12) DA(D13) DT(D14) DT(D15) DT(D16) DC(D17) DC(D18) DT(D19) DA(D20) DA(D21) DT(D22) DT(D23) DT(D24) DA(D25) chainB (234) PRO240 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (236) ARG242 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mikvyryeivkpldldwkefgtilrqlqqetrfalnkatqlawewmgfssdykdnhgeilgytnvhgyayhtiktkayrlnsgnlsqtikratdrfkayqkeilrgdmsipsykrdhpldlikenisvnrmnhgdyiaslsllsnpakqemnvkrkisviiivrgagktimdrilsgeyqvsasqiihkdrknkwylnisyrfepqtrvldlnkimgidlgvavaaymafqhtPaRykleggeienfrrqvesrrismlkpieqlrdkianfrdttnhrysryivdmaikegcgtiqmedldigsrflqnwtyydlqqkiiykaeeagikvikidpqytsqrcsecgnidgqaifkcracgyeanadynaarniaipnidkiiaesi >8j6s_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYO-EM STRUCTURE OF THE SINGLE CAF-1 BOUND RIGHT-HANDED DI-TETRASOME organism=? DNA sequence DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DG(I50):DT(J99) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DG(I76):DA(J73) DT(I77):DC(J72) DC(I78):DA(J71) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I91):DT(J58) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) chainG chainH ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainF chainC chainD ( 21) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA chainB ( 20) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/iqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqg/alreirryqkstellirklPfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtl/tvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/dniqgitkpairrlarrggvKrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtl/ellirklpfqrlvreiaqdfKtdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/niqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr >8jh2_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX BOUND WITH ELF1, SPT4/5 AND FOREIGN DNA, STALLED AT SHL(-1) OF THE NUCLEOSOME organism=? DNA sequence DA(T-72):DT(N72) DT(T-71):DA(N71) DC(T-70):DG(N70) DA(T-69):DT(N69) DG(T-68):DC(N68) DA(T-67):DT(N67) DA(T-66):DT(N66) DT(T-65):DA(N65) DC(T-64):DG(N64) DC(T-63):DG(N63) DC(T-62):DG(N62) DG(T-61):DC(N61) DG(T-60):DC(N60) DT(T-59):DA(N59) DG(T-58):DC(N58) DC(T-57):DG(N57) DC(T-56):DG(N56) DG(T-55):DC(N55) DA(T-54):DT(N54) DG(T-53):DC(N53) DG(T-52):DC(N52) DC(T-51):DG(N51) DC(T-50):DG(N50) DG(T-49):DC(N49) DC(T-48):DG(N48) DT(T-47):DA(N47) DC(T-46):DG(N46) DA(T-45):DT(N45) DA(T-44):DT(N44) DT(T-43):DA(N43) DT(T-42):DA(N42) DG(T-41):DC(N41) DG(T-40):DC(N40) DT(T-39):DA(N39) DC(T-38):DG(N38) DG(T-37):DC(N37) DT(T-36):DA(N36) DA(T-35):DT(N35) DG(T-34):DC(N34) DA(T-33):DT(N33) DC(T-32):DG(N32) DA(T-31):DT(N31) DG(T-30):DC(N30) DC(T-29):DG(N29) DT(T-28):DA(N28) DC(T-27):DG(N27) DT(T-26):DA(N26) DA(T-25):DT(N25) DG(T-24):DC(N24) DC(T-23):DG(N23) DA(T-22):DT(N22) DC(T-21):DG(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DT(T-17):DA(N17) DT(T-16):DA(N16) DA(T-15):DT(N15) DA(T-14):DT(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DG(T-11):DC(N11) DC(T-10):DG(N10) DA(T-9):DT(N9) DC(T-8):DG(N8) DG(T-7):DC(N7) DT(T-6):DA(N6) DA(T-5):DT(N5) DC(T-4):DG(N4) DG(T-3):DC(N3) DC(T-2):DG(N2) DG(T-1):DC(N1) DC(T0):DG(N0) DT(T1):DA(N-1) DG(T2):DC(N-2) DT(T3):DA(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DC(T7):DG(N-7) DC(T8):DG(N-8) DG(T9):DC(N-9) DC(T10):DG(N-10) DG(T11):DC(N-11) DT(T12):DA(N-12) DT(T13):DA(N-13) DT(T14):DA(N-14) DA(T16):DA(N-15) DA(T17):DT(N-16) DC(T18):DG(N-18) DG(T20):DC(N-20) DC(T21):DG(N-21) DC(T22):DG(N-22) DA(T24):DT(N-23) DG(T25):DC(N-25) DG(T26):DC(N-26) DG(T27):DC(N-27) DA(T29):DC(N-28) DT(T30):DA(N-30) DT(T31):DC(N-40) DA(T32):DT(N-41) DC(T33):DG(N-42) DA(T34):DT(N-43) DC(T35):DG(N-44) DC(T36):DG(N-45) DC(T37):DT(N-46) DA(T38):DC(N-47) DA(T39):DC(N-48) DG(T40):DG(N-49) DA(T41):DT(N-50) DC(T42):DG(N-51) DA(T43):DC(N-52) DC(T44):DT(N-53) DC(T45):DC(N-54) chainA (303) LYS318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 13 0 0 0 (336) ARG351 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (433) GLN448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (434) PRO449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 (817) THR832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (818) ALA833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sqfpyssaplrsvkevqfgllspeeiraisvvkieypeimdesrqrpregglndpklgsidrnfkcqtcgegmaecpghfghmelakpvfhigfipkikkvcecicmncgkllldetnptmaqairirdpkkrfnavwqlcktkmvceadapsrggcgntqpvvrkdgmklwgtwkksrdaqperklltpgeilnvfkhispedcfrlgfnedyarpewmiitvlpvpppqvrpsiamdettqgqddlthklsdilkaninvqklemdgspqhiineveqllqfhvatymdndiagqpqalqKsgrpvkairarlkgkegrlrgnlmgkrvdfsaRtvisgdpnleldqvgvpisiaktlsypetvtqynihrlteyvrngpnehpgakyvirdngdridlryhkragdivlqygwkverhlmdddpvlfnrQPslhkmsmmahrvkvmpystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpvmgivqdtlcgvrkmtlrdtfieyeqvmnmlfwvpswdgvvpqpailkpkplwtgkqllsiaipsgihlqrtdggnsllspkdngmlivdgkvmfgvvdkktvgsgggglihtvmrekgpkicaelfgniqkvvnywllhngfsigigdaiadastmkeithaissakeqvqeiiykaqhnelelkpgmtlresfegevsrtlndardsagrsaemnlkdlnnvkqmvsagskgsfiniaqmsacvgqqmvegkriafgfadrslphftkddfspeskgfvensylrgltpqefffhamagreglidtavkTAetgyiqrrlvkaledimvhydgttrnslgdiiqflygedgldgtqverqtidtipgsdkafhkryyvdlmdeknsikpdvieyaadilgdvelqkelnseyeqlvsdrkflreivfvngdhnwplpvnlrriiqnaqqifhldrakasdltipeiihgvrdlckklfvlrgenelikeaqqnatslfqclvrarlatrrileefrlnrdafewvlgtieaqfqrslvhpgemvgviaaqsigepatqmnvtlgvprlkeilnvakniktpaltvyldreialdiekakviqssieyttlknvtsateiyydpdptstvieedfdtveayfsqspwllrleldrarmldkqltmnqvadkisevfsddlfvmwsednadkliircrvieedqmlkrieahmldlialrgipgiskvymvkhkvsvpdesgeykneelwaletdginlaevmavpgvdssrtysnsfveilsvlgieatrsslykeilnviafdgsyvnyrhmallvdvmtsrgylmaitrhginradtgalmrcsfeetveilfeagaaaelddcrgvsenvmlgqlapmgtgafdvmideklltslpadyapt >8jh3_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=RNA POLYMERASE II ELONGATION COMPLEX CONTAINING 40 BP UPSTREAM DNA LOOP, STALLED AT SHL(-1) OF THE NUCLEOSOME organism=? DNA sequence DG(N-86):DC(T86) DG(N-85):DC(T85) DG(N-84):DC(T84) DT(N-83):DA(T83) DG(N-82):DC(T82) DG(N-81):DC(T81) DT(N-80):DA(T80) DG(N-79):DC(T79) DG(N-78):DC(T78) DC(N-77):DG(T77) DC(N-76):DG(T76) DG(N-75):DC(T75) DT(N-74):DA(T74) DT(N-73):DA(T73) DT(N-72):DA(T72) DT(N-71):DA(T71) DC(N-70):DG(T70) DG(N-69):DC(T69) DT(N-68):DA(T68) DT(N-67):DA(T67) DG(N-66):DC(T66) DT(N-65):DA(T65) DT(N-64):DA(T64) DT(N-63):DA(T63) DT(N-62):DA(T62) DT(N-61):DA(T61) DT(N-60):DA(T60) DT(N-59):DA(T59) DC(N-58):DG(T58) DT(N-57):DA(T57) DG(N-56):DC(T56) DT(N-55):DA(T55) DC(N-54):DG(T54) DT(N-53):DA(T53) DC(N-52):DG(T52) DG(N-51):DC(T51) DT(N-50):DA(T50) DG(N-49):DC(T49) DC(N-48):DG(T48) DC(N-47):DG(T47) DT(N-46):DG(T28) DC(N-27):DG(T27) DC(N-26):DG(T26) DC(N-25):DG(T25) DT(N-24):DA(T24) DT(N-23):DA(T23) DG(N-22):DC(T22) DG(N-21):DC(T21) DC(N-20):DG(T20) DG(N-19):DC(T19) DG(N-18):DC(T18) DT(N-17):DA(T17) DT(N-16):DA(T16) DA(N-15):DT(T15) DA(N-14):DT(T14) DA(N-13):DT(T13) DA(N-12):DT(T12) DC(N-11):DG(T11) DG(N-10):DC(T10) DC(N-9):DG(T9) DG(N-8):DC(T8) DG(N-7):DC(T7) DG(N-6):DC(T6) DG(N-5):DC(T5) DG(N-4):DC(T4) DA(N-3):DT(T3) DC(N-2):DG(T2) DA(N-1):DT(T1) DG(N0):DC(T0) DC(N1):DG(T-1) DG(N2):DC(T-2) DC(N3):DG(T-3) DG(N4):DC(T-4) DT(N5):DA(T-5) DA(N6):DT(T-6) DC(N7):DG(T-7) DG(N8):DC(T-8) DT(N9):DA(T-9) DG(N10):DC(T-10) DC(N11):DG(T-11) DG(N12):DC(T-12) DT(N13):DA(T-13) DT(N14):DA(T-14) DT(N15):DA(T-15) DA(N16):DT(T-16) DA(N17):DT(T-17) DG(N18):DC(T-18) DC(N19):DG(T-19) DG(N20):DC(T-20) DG(N21):DC(T-21) DT(N22):DA(T-22) DG(N23):DC(T-23) DC(N24):DG(T-24) DT(N25):DA(T-25) DA(N26):DT(T-26) DG(N27):DC(T-27) DA(N28):DT(T-28) DG(N29):DC(T-29) DC(N30):DG(T-30) DT(N31):DA(T-31) DG(N32):DC(T-32) DT(N33):DA(T-33) DC(N34):DG(T-34) DT(N35):DA(T-35) DA(N36):DT(T-36) DC(N37):DG(T-37) DG(N38):DC(T-38) DA(N39):DT(T-39) DC(N40):DG(T-40) DC(N41):DG(T-41) DA(N42):DT(T-42) DA(N43):DT(T-43) DT(N44):DA(T-44) DT(N45):DA(T-45) DG(N46):DC(T-46) DA(N47):DT(T-47) DG(N48):DC(T-48) DC(N49):DG(T-49) DG(N50):DC(T-50) DG(N51):DC(T-51) DC(N52):DG(T-52) DC(N53):DG(T-53) DT(N54):DA(T-54) DC(N55):DG(T-55) DG(N56):DC(T-56) DG(N57):DC(T-57) DC(N58):DG(T-58) DA(N59):DT(T-59) DC(N60):DG(T-60) DC(N61):DG(T-61) DG(N62):DC(T-62) DG(N63):DC(T-63) DG(N64):DC(T-64) DA(N65):DT(T-65) DT(N66):DA(T-66) DT(N67):DA(T-67) DC(N68):DG(T-68) DT(N69):DA(T-69) DG(N70):DC(T-70) DA(N71):DT(T-71) DT(N72):DA(T-72) chainA (1338) ARG1389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1356) GLU1407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sqfpyssaplrsvkevqfgllspeeiraisvvkieypeimdesrqrpregglndpklgsidrnfkcqtcgegmaecpghfghmelakpvfhigfipkikkvcecicmncgkllldetnptmaqairirdpkkrfnavwqlcktkmvceadapkvvsrggcgntqpvvrkdgmklwgtwkksaqperklltpgeilnvfkhispedcfrlgfnedyarpewmiitvlpvpppqvrpsiamdettqgqddlthklsdilkaninvqklemdgspqhiineveqllqfhvatymdndiagqpqalqksgrpvkairarlkgkegrlrgnlmgkrvdfsartvisgdpnleldqvgvpisiaktlsypetvtqynihrlteyvrngpnehpgakyvirdngdridlryhkragdivlqygwkverhlmdddpvlfnrqpslhkmsmmahrvkvmpystfrlnlsvtspynadfdgdemnlhvpqseetraelsqlcavplqivspqsnkpvmgivqdtlcgvrkmtlrdtfieyeqvmnmlfwvpswdgvvpqpailkpkplwtgkqllsiaipsgihlqrtdggnsllspkdngmlivdgkvmfgvvdkktvgsgggglihtvmrekgpkicaelfgniqkvvnywllhngfsigigdaiadastmkeithaissakeqvqeiiykaqhnelelkpgmtlresfegevsrtlndardsagrsaemnlkdlnnvkqmvsagskgsfiniaqmsacvgqqmvegkriafgfadrslphftkddfspeskgfvensylrgltpqefffhamagreglidtavktaetgyiqrrlvkaledimvhydgttrnslgdiiqflygedgldgtqverqtidtipgsdkafhkryyvdlmdeknsikpdvieyaadilgdvelqkelnseyeqlvsdrkflreivfvngdhnwplpvnlrriiqnaqqifhldrakasdltipeiihgvrdlckklfvlrgenelikeaqqnatslfqclvrarlatrrileefrlnrdafewvlgtieaqfqrslvhpgemvgviaaqsigepatqmnvtlgvprlkeilnvakniktpaltvyldreialdiekakviqssieyttlknvtsateiyydpdptstvieedfdtveayfsqspwllrleldrarmldkqltmnqvadkisevfsddlfvmwsednadkliircrvieedqmlkrieahmldlialrgipgiskvymvkhkvsvpdesgeykneelwaletdginlaevmavpgvdssrtysnsfveilsvlgieatrsslykeilnviafdgsyvnyrhmallvdvmtsrgylmaitRhginradtgalmrcsfeEtveilfeagaaaelddcrgvsenvmlgqlapmgtgafdvmideklltslpadyapt >8jh4_f:Histone-fold; title=RNA POLYMERASE II ELONGATION COMPLEX CONTAINING 60 BP UPSTREAM DNA LOOP, STALLED AT SHL(-1) OF THE NUCLEOSOME organism=? DNA sequence DA(T-72):DT(N72) DT(T-71):DA(N71) DC(T-70):DG(N70) DA(T-69):DT(N69) DG(T-68):DC(N68) DA(T-67):DT(N67) DA(T-66):DT(N66) DT(T-65):DA(N65) DC(T-64):DG(N64) DC(T-63):DG(N63) DC(T-62):DG(N62) DG(T-61):DC(N61) DG(T-60):DC(N60) DT(T-59):DA(N59) DG(T-58):DC(N58) DC(T-57):DG(N57) DC(T-56):DG(N56) DG(T-55):DC(N55) DA(T-54):DT(N54) DG(T-53):DC(N53) DG(T-52):DC(N52) DC(T-51):DG(N51) DC(T-50):DG(N50) DG(T-49):DC(N49) DC(T-48):DG(N48) DT(T-47):DA(N47) DC(T-46):DG(N46) DA(T-45):DT(N45) DA(T-44):DT(N44) DT(T-43):DA(N43) DT(T-42):DA(N42) DG(T-41):DC(N41) DG(T-40):DC(N40) DT(T-39):DA(N39) DC(T-38):DG(N38) DG(T-37):DC(N37) DT(T-36):DA(N36) DA(T-35):DT(N35) DG(T-34):DC(N34) DA(T-33):DT(N33) DC(T-32):DG(N32) DA(T-31):DT(N31) DG(T-30):DC(N30) DC(T-29):DG(N29) DT(T-28):DA(N28) DC(T-27):DG(N27) DT(T-26):DA(N26) DA(T-25):DT(N25) DG(T-24):DC(N24) DC(T-23):DG(N23) DA(T-22):DT(N22) DC(T-21):DG(N21) DC(T-20):DG(N20) DG(T-19):DC(N19) DC(T-18):DG(N18) DT(T-17):DA(N17) DT(T-16):DA(N16) DA(T-15):DT(N15) DA(T-14):DT(N14) DA(T-13):DT(N13) DC(T-12):DG(N12) DG(T-11):DC(N11) DC(T-10):DG(N10) DA(T-9):DT(N9) DC(T-8):DG(N8) DG(T-7):DC(N7) DT(T-6):DA(N6) DA(T-5):DT(N5) DC(T-4):DG(N4) DG(T-3):DC(N3) DC(T-2):DG(N2) DG(T-1):DC(N1) DC(T0):DG(N0) DT(T1):DA(N-1) DG(T2):DC(N-2) DT(T3):DA(N-3) DC(T4):DG(N-4) DC(T5):DG(N-5) DC(T6):DG(N-6) DC(T7):DG(N-7) DC(T8):DG(N-8) DG(T9):DC(N-9) DC(T10):DG(N-10) DG(T11):DC(N-11) DT(T12):DA(N-12) DT(T13):DA(N-13) DT(T14):DA(N-14) DT(T15):DA(N-15) DA(T16):DT(N-16) DA(T17):DT(N-17) DC(T18):DG(N-18) DC(T19):DG(N-19) DG(T20):DC(N-20) DC(T21):DG(N-21) DC(T22):DG(N-22) DA(T23):DT(N-23) DA(T24):DT(N-24) DG(T25):DC(N-25) DG(T26):DC(N-26) DG(T27):DC(N-27) DG(T28):DC(N-28) DA(T29):DT(N-29) DT(T30):DA(N-30) DT(T31):DA(N-31) DC(T44):DG(N-44) DC(T45):DG(N-45) DA(T46):DT(N-46) DG(T47):DC(N-47) DG(T48):DC(N-48) DC(T49):DG(N-49) DA(T50):DT(N-50) DC(T51):DG(N-51) DG(T52):DC(N-52) DA(T53):DT(N-53) DG(T54):DC(N-54) DA(T55):DT(N-55) DC(T56):DG(N-56) DA(T57):DT(N-57) DG(T58):DC(N-58) DA(T59):DT(N-59) DA(T60):DT(N-60) DA(T61):DT(N-61) DA(T62):DT(N-62) DA(T63):DT(N-63) DA(T64):DT(N-64) DA(T65):DT(N-65) DC(T66):DG(N-66) DA(T67):DT(N-67) DA(T68):DT(N-68) DC(T69):DG(N-69) DG(T70):DC(N-70) DA(T71):DT(N-71) DA(T72):DT(N-72) DA(T73):DT(N-73) DA(T74):DT(N-74) DC(T75):DG(N-75) DG(T76):DC(N-76) DG(T77):DC(N-77) DC(T78):DG(N-78) DC(T79):DG(N-79) DA(T80):DT(N-80) DC(T81):DG(N-81) DC(T82):DG(N-82) DA(T83):DT(N-83) DC(T84):DG(N-84) DC(T85):DG(N-85) DC(T86):DG(N-86) DA(T87):DT(N-87) DA(T88):DT(N-88) DA(T89):DT(N-89) DC(T90):DG(N-90) DA(T91):DT(N-91) DC(T92):DG(N-92) DA(T93):DT(N-93) DC(T94):DG(N-94) DC(T95):DG(N-95) DA(T96):DT(N-96) DA(T97):DT(N-97) DA(T98):DT(N-98) DC(T99):DG(N-99) DA(T100):DT(N-100) DC(T101):DG(N-101) DA(T102):DT(N-102) DA(T103):DT(N-103) DG(T104):DT(N-104) DA(T105):DC(N-105) chainf ( 22) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >8jhf_ABCDEFGH: title=NATIVE SUV420H1 BOUND TO 167-BP NUCLEOSOME organism=? DNA sequence DA(I1):DT(J167) DT(I2):DA(J166) DC(I3):DG(J165) DC(I4):DG(J164) DG(I5):DC(J163) DA(I6):DT(J162) DT(I7):DA(J161) DC(I8):DG(J160) DC(I9):DG(J159) DC(I10):DG(J158) DC(I11):DG(J157) DT(I12):DA(J156) DG(I13):DC(J155) DG(I14):DC(J154) DA(I15):DT(J153) DG(I16):DC(J152) DA(I17):DT(J151) DA(I18):DT(J150) DT(I19):DA(J149) DC(I20):DG(J148) DC(I21):DG(J147) DC(I22):DG(J146) DG(I23):DC(J145) DG(I24):DC(J144) DT(I25):DA(J143) DG(I26):DC(J142) DC(I27):DG(J141) DC(I28):DG(J140) DG(I29):DC(J139) DA(I30):DT(J138) DG(I31):DC(J137) DG(I32):DC(J136) DC(I33):DG(J135) DC(I34):DG(J134) DG(I35):DC(J133) DC(I36):DG(J132) DT(I37):DA(J131) DC(I38):DG(J130) DA(I39):DT(J129) DA(I40):DT(J128) DT(I41):DA(J127) DT(I42):DA(J126) DG(I43):DC(J125) DG(I44):DC(J124) DT(I45):DA(J123) DC(I46):DG(J122) DG(I47):DC(J121) DT(I48):DA(J120) DA(I49):DT(J119) DG(I50):DC(J118) DA(I51):DT(J117) DC(I52):DG(J116) DA(I53):DT(J115) DG(I54):DC(J114) DC(I55):DG(J113) DT(I56):DA(J112) DC(I57):DG(J111) DT(I58):DA(J110) DA(I59):DT(J109) DG(I60):DC(J108) DC(I61):DG(J107) DA(I62):DT(J106) DC(I63):DG(J105) DC(I64):DG(J104) DG(I65):DC(J103) DC(I66):DG(J102) DT(I67):DA(J101) DT(I68):DA(J100) DA(I69):DT(J99) DA(I70):DT(J98) DA(I71):DT(J97) DC(I72):DG(J96) DG(I73):DC(J95) DC(I74):DG(J94) DA(I75):DT(J93) DC(I76):DG(J92) DG(I77):DC(J91) DT(I78):DA(J90) DA(I79):DT(J89) DC(I80):DG(J88) DG(I81):DC(J87) DC(I82):DG(J86) DG(I83):DC(J85) DC(I84):DG(J84) DT(I85):DA(J83) DG(I86):DC(J82) DT(I87):DA(J81) DC(I88):DG(J80) DC(I89):DG(J79) DC(I90):DG(J78) DC(I91):DG(J77) DC(I92):DG(J76) DG(I93):DC(J75) DC(I94):DG(J74) DG(I95):DC(J73) DT(I96):DA(J72) DT(I97):DA(J71) DT(I98):DA(J70) DT(I99):DA(J69) DA(I100):DT(J68) DA(I101):DT(J67) DC(I102):DG(J66) DC(I103):DG(J65) DG(I104):DC(J64) DC(I105):DG(J63) DC(I106):DG(J62) DA(I107):DT(J61) DA(I108):DT(J60) DG(I109):DC(J59) DG(I110):DC(J58) DG(I111):DC(J57) DG(I112):DC(J56) DA(I113):DT(J55) DT(I114):DA(J54) DT(I115):DA(J53) DA(I116):DT(J52) DC(I117):DG(J51) DT(I118):DA(J50) DC(I119):DG(J49) DC(I120):DG(J48) DC(I121):DG(J47) DT(I122):DA(J46) DA(I123):DT(J45) DG(I124):DC(J44) DT(I125):DA(J43) DC(I126):DG(J42) DT(I127):DA(J41) DC(I128):DG(J40) DC(I129):DG(J39) DA(I130):DT(J38) DG(I131):DC(J37) DG(I132):DC(J36) DC(I133):DG(J35) DA(I134):DT(J34) DC(I135):DG(J33) DG(I136):DC(J32) DT(I137):DA(J31) DG(I138):DC(J30) DT(I139):DA(J29) DC(I140):DG(J28) DA(I141):DT(J27) DG(I142):DC(J26) DA(I143):DT(J25) DT(I144):DA(J24) DA(I145):DT(J23) DT(I146):DA(J22) DA(I147):DT(J21) DT(I148):DA(J20) DA(I149):DT(J19) DC(I150):DG(J18) DA(I151):DT(J17) DT(I152):DA(J16) DC(I153):DG(J15) DC(I154):DG(J14) DT(I155):DA(J13) DG(I156):DC(J12) DT(I157):DA(J11) DT(I158):DA(J10) DC(I159):DG(J9) DC(I160):DG(J8) chainA chainB chainC chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainF chainG chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence yrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rmvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktkavsrsqraglqfpvgrihrhlksrttshgrvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksligkkgqq/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rhRmvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/avSrsqraglqfpvgrihrhlksrttshgrvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksligkkgqq/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >8jhg_ABCDEFGH: title=NATIVE SUV420H1 BOUND TO 167-BP NUCLEOSOME organism=? DNA sequence DG(J8):DC(I160) DG(J9):DC(I159) DA(J10):DT(I158) DA(J11):DT(I157) DC(J12):DG(I156) DA(J13):DT(I155) DG(J14):DC(I154) DG(J15):DC(I153) DA(J16):DT(I152) DT(J17):DA(I151) DG(J18):DC(I150) DT(J19):DA(I149) DA(J20):DT(I148) DT(J21):DA(I147) DA(J22):DT(I146) DT(J23):DA(I145) DA(J24):DT(I144) DT(J25):DA(I143) DC(J26):DG(I142) DT(J27):DA(I141) DG(J28):DC(I140) DA(J29):DT(I139) DC(J30):DG(I138) DA(J31):DT(I137) DC(J32):DG(I136) DG(J33):DC(I135) DT(J34):DA(I134) DG(J35):DC(I133) DC(J36):DG(I132) DC(J37):DG(I131) DT(J38):DA(I130) DG(J39):DC(I129) DG(J40):DC(I128) DA(J41):DT(I127) DG(J42):DC(I126) DA(J43):DT(I125) DC(J44):DG(I124) DT(J45):DA(I123) DA(J46):DT(I122) DG(J47):DC(I121) DG(J48):DC(I120) DG(J49):DC(I119) DA(J50):DT(I118) DG(J51):DC(I117) DT(J52):DA(I116) DA(J53):DT(I115) DA(J54):DT(I114) DT(J55):DA(I113) DC(J56):DG(I112) DC(J57):DG(I111) DC(J58):DG(I110) DC(J59):DG(I109) DT(J60):DA(I108) DT(J61):DA(I107) DG(J62):DC(I106) DG(J63):DC(I105) DC(J64):DG(I104) DG(J65):DC(I103) DG(J66):DC(I102) DT(J67):DA(I101) DT(J68):DA(I100) DA(J69):DT(I99) DA(J70):DT(I98) DA(J71):DT(I97) DA(J72):DT(I96) DC(J73):DG(I95) DG(J74):DC(I94) DC(J75):DG(I93) DG(J76):DC(I92) DG(J77):DC(I91) DG(J78):DC(I90) DG(J79):DC(I89) DG(J80):DC(I88) DA(J81):DT(I87) DC(J82):DG(I86) DA(J83):DT(I85) DG(J84):DC(I84) DC(J85):DG(I83) DG(J86):DC(I82) DC(J87):DG(I81) DG(J88):DC(I80) DT(J89):DA(I79) DA(J90):DT(I78) DC(J91):DG(I77) DG(J92):DC(I76) DT(J93):DA(I75) DG(J94):DC(I74) DC(J95):DG(I73) DG(J96):DC(I72) DT(J97):DA(I71) DT(J98):DA(I70) DT(J99):DA(I69) DA(J100):DT(I68) DA(J101):DT(I67) DG(J102):DC(I66) DC(J103):DG(I65) DG(J104):DC(I64) DG(J105):DC(I63) DT(J106):DA(I62) DG(J107):DC(I61) DC(J108):DG(I60) DT(J109):DA(I59) DA(J110):DT(I58) DG(J111):DC(I57) DA(J112):DT(I56) DG(J113):DC(I55) DC(J114):DG(I54) DT(J115):DA(I53) DG(J116):DC(I52) DT(J117):DA(I51) DC(J118):DG(I50) DT(J119):DA(I49) DA(J120):DT(I48) DC(J121):DG(I47) DG(J122):DC(I46) DA(J123):DT(I45) DC(J124):DG(I44) DC(J125):DG(I43) DA(J126):DT(I42) DA(J127):DT(I41) DT(J128):DA(I40) DT(J129):DA(I39) DG(J130):DC(I38) DA(J131):DT(I37) DG(J132):DC(I36) DC(J133):DG(I35) DG(J134):DC(I34) DG(J135):DC(I33) DC(J136):DG(I32) DC(J137):DG(I31) DT(J138):DA(I30) DC(J139):DG(I29) DG(J140):DC(I28) DG(J141):DC(I27) DC(J142):DG(I26) DA(J143):DT(I25) DC(J144):DG(I24) DC(J145):DG(I23) DG(J146):DC(I22) DG(J147):DC(I21) DG(J148):DC(I20) DA(J149):DT(I19) DT(J150):DA(I18) DT(J151):DA(I17) DC(J152):DG(I16) DT(J153):DA(I15) DC(J154):DG(I14) DC(J155):DG(I13) DA(J156):DT(I12) DG(J157):DC(I11) DG(J158):DC(I10) DG(J159):DC(I9) DA(J161):DC(I8) DT(J162):DT(I7) DC(J163):DG(I5) DG(J164):DC(I4) DG(J165):DC(I3) DA(J166):DT(I2) DT(J167):DA(I1) chainA ( 8) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC (110) HIS124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gvkkphrYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/rmvlrdnIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkteshH/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rhRmvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/ktRssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkteshhkakgk/rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >8jho_e:Histone-fold; title=CRYO-EM STRUCTURE OF THE HISTONE DEACETYLASE COMPLEX RPD3S IN COMPLEX WITH DI-NUCLEOSOME organism=? DNA sequence DA(J11):DT(I333) DA(J12):DT(I332) DT(J13):DA(I331) DA(J14):DT(I330) DC(J15):DG(I329) DA(J16):DT(I328) DT(J17):DA(I327) DG(J18):DC(I326) DC(J19):DG(I325) DA(J20):DT(I324) DC(J21):DG(I323) DA(J22):DT(I322) DG(J23):DC(I321) DG(J24):DC(I320) DA(J25):DT(I319) DT(J26):DA(I318) DG(J27):DC(I317) DT(J28):DA(I316) DA(J29):DT(I315) DT(J30):DA(I314) DA(J31):DT(I313) DT(J32):DA(I312) DA(J33):DT(I311) DT(J34):DA(I310) DC(J35):DG(I309) DT(J36):DA(I308) DG(J37):DC(I307) DA(J38):DT(I306) DC(J39):DG(I305) DA(J40):DT(I304) DC(J41):DG(I303) DG(J42):DC(I302) DT(J43):DA(I301) DG(J44):DC(I300) DC(J45):DG(I299) DC(J46):DG(I298) DT(J47):DA(I297) DG(J48):DC(I296) DG(J49):DC(I295) DA(J50):DT(I294) DG(J51):DC(I293) DA(J52):DT(I292) DC(J53):DG(I291) DT(J54):DA(I290) DA(J55):DT(I289) DG(J56):DC(I288) DG(J57):DC(I287) DG(J58):DC(I286) DA(J59):DT(I285) DG(J60):DC(I284) DT(J61):DA(I283) DA(J62):DT(I282) DA(J63):DT(I281) DT(J64):DA(I280) DC(J65):DG(I279) DC(J66):DG(I278) DC(J67):DG(I277) DC(J68):DG(I276) DT(J69):DA(I275) DT(J70):DA(I274) DG(J71):DC(I273) DG(J72):DC(I272) DC(J73):DG(I271) DG(J74):DC(I270) DG(J75):DC(I269) DT(J76):DA(I268) DT(J77):DA(I267) DA(J78):DT(I266) DA(J79):DT(I265) DA(J80):DT(I264) DA(J81):DT(I263) DC(J82):DG(I262) DG(J83):DC(I261) DC(J84):DG(I260) DG(J85):DC(I259) DG(J86):DC(I258) DG(J87):DC(I257) DG(J88):DC(I256) DG(J89):DC(I255) DA(J90):DT(I254) DC(J91):DG(I253) DA(J92):DT(I252) DG(J93):DC(I251) DC(J94):DG(I250) DG(J95):DC(I249) DC(J96):DG(I248) DG(J97):DC(I247) DT(J98):DA(I246) DA(J99):DT(I245) DC(J100):DG(I244) DG(J101):DC(I243) DT(J102):DA(I242) DG(J103):DC(I241) DC(J104):DG(I240) DG(J105):DC(I239) DT(J106):DA(I238) DT(J107):DA(I237) DT(J108):DA(I236) DA(J109):DT(I235) DA(J110):DT(I234) DG(J111):DC(I233) DC(J112):DG(I232) DG(J113):DC(I231) DG(J114):DC(I230) DT(J115):DA(I229) DG(J116):DC(I228) DC(J117):DG(I227) DT(J118):DA(I226) DA(J119):DT(I225) DG(J120):DC(I224) DA(J121):DT(I223) DG(J122):DC(I222) DC(J123):DG(I221) DT(J124):DA(I220) DG(J125):DC(I219) DT(J126):DA(I218) DC(J127):DG(I217) DT(J128):DA(I216) DA(J129):DT(I215) DC(J130):DG(I214) DG(J131):DC(I213) DA(J132):DT(I212) DC(J133):DG(I211) DC(J134):DG(I210) DA(J135):DT(I209) DA(J136):DT(I208) DT(J137):DA(I207) DT(J138):DA(I206) DG(J139):DC(I205) DA(J140):DT(I204) DG(J141):DC(I203) DC(J142):DG(I202) DG(J143):DC(I201) DG(J144):DC(I200) DC(J145):DG(I199) DC(J146):DG(I198) DT(J147):DA(I197) DC(J148):DG(I196) DG(J149):DC(I195) DG(J150):DC(I194) DC(J151):DG(I193) DA(J152):DT(I192) DC(J153):DG(I191) DC(J154):DG(I190) DG(J155):DC(I189) DG(J156):DC(I188) DG(J157):DC(I187) DA(J158):DT(I186) DT(J159):DA(I185) DT(J160):DA(I184) DC(J161):DG(I183) DT(J162):DA(I182) DC(J163):DG(I181) DC(J164):DG(I180) DA(J165):DT(I179) DG(J166):DC(I178) DT(J167):DA(I177) DC(J168):DG(I176) DT(J169):DA(I175) DA(J170):DT(I174) DG(J171):DC(I173) DA(J172):DT(I172) DA(J173):DT(I171) DC(J174):DG(I170) DT(J175):DA(I169) DG(J176):DC(I168) DG(J177):DC(I167) DC(J178):DG(I166) DA(J179):DT(I165) DG(J180):DC(I164) DT(J181):DA(I163) DA(J182):DT(I162) DC(J183):DG(I161) DT(J184):DA(I160) DT(J185):DA(I159) DT(J186):DA(I158) DC(J187):DG(I157) DA(J188):DT(I156) DA(J189):DT(I155) DT(J190):DA(I154) DA(J191):DT(I153) DC(J192):DG(I152) DA(J193):DT(I151) DT(J194):DA(I150) DG(J195):DC(I149) DC(J196):DG(I148) DA(J197):DT(I147) DC(J198):DG(I146) DA(J199):DT(I145) DG(J200):DC(I144) DG(J201):DC(I143) DA(J202):DT(I142) DT(J203):DA(I141) DG(J204):DC(I140) DT(J205):DA(I139) DA(J206):DT(I138) DT(J207):DA(I137) DA(J208):DT(I136) DT(J209):DA(I135) DA(J210):DT(I134) DT(J211):DA(I133) DC(J212):DG(I132) DT(J213):DA(I131) DG(J214):DC(I130) DA(J215):DT(I129) DC(J216):DG(I128) DA(J217):DT(I127) DC(J218):DG(I126) DG(J219):DC(I125) DT(J220):DA(I124) DG(J221):DC(I123) DC(J222):DG(I122) DC(J223):DG(I121) DT(J224):DA(I120) DG(J225):DC(I119) DG(J226):DC(I118) DA(J227):DT(I117) DG(J228):DC(I116) DA(J229):DT(I115) DC(J230):DG(I114) DT(J231):DA(I113) DA(J232):DT(I112) DG(J233):DC(I111) DG(J234):DC(I110) DG(J235):DC(I109) DA(J236):DT(I108) DG(J237):DC(I107) DT(J238):DA(I106) DA(J239):DT(I105) DA(J240):DT(I104) DT(J241):DA(I103) DC(J242):DG(I102) DC(J243):DG(I101) DC(J244):DG(I100) DC(J245):DG(I99) DT(J246):DA(I98) DT(J247):DA(I97) DG(J248):DC(I96) DG(J249):DC(I95) DC(J250):DG(I94) DG(J251):DC(I93) DG(J252):DC(I92) DT(J253):DA(I91) DT(J254):DA(I90) DA(J255):DT(I89) DA(J256):DT(I88) DA(J257):DT(I87) DA(J258):DT(I86) DC(J259):DG(I85) DG(J260):DC(I84) DC(J261):DG(I83) DG(J262):DC(I82) DG(J263):DC(I81) DG(J264):DC(I80) DG(J265):DC(I79) DG(J266):DC(I78) DA(J267):DT(I77) DC(J268):DG(I76) DA(J269):DT(I75) DG(J270):DC(I74) DC(J271):DG(I73) DG(J272):DC(I72) DC(J273):DG(I71) DG(J274):DC(I70) DT(J275):DA(I69) DA(J276):DT(I68) DC(J277):DG(I67) DG(J278):DC(I66) DT(J279):DA(I65) DG(J280):DC(I64) DC(J281):DG(I63) DG(J282):DC(I62) DT(J283):DA(I61) DT(J284):DA(I60) DT(J285):DA(I59) DA(J286):DT(I58) DA(J287):DT(I57) DG(J288):DC(I56) DC(J289):DG(I55) DG(J290):DC(I54) DG(J291):DC(I53) DT(J292):DA(I52) DG(J293):DC(I51) DC(J294):DG(I50) DT(J295):DA(I49) DA(J296):DT(I48) DG(J297):DC(I47) DA(J298):DT(I46) DG(J299):DC(I45) DC(J300):DG(I44) DT(J301):DA(I43) DG(J302):DC(I42) DT(J303):DA(I41) DC(J304):DG(I40) DT(J305):DA(I39) DA(J306):DT(I38) DC(J307):DG(I37) DG(J308):DC(I36) DA(J309):DT(I35) DC(J310):DG(I34) DC(J311):DG(I33) DA(J312):DT(I32) DA(J313):DT(I31) DT(J314):DA(I30) DT(J315):DA(I29) DG(J316):DC(I28) DA(J317):DT(I27) DG(J318):DC(I26) DC(J319):DG(I25) DG(J320):DC(I24) DG(J321):DC(I23) DC(J322):DG(I22) DC(J323):DG(I21) DT(J324):DA(I20) DC(J325):DG(I19) DG(J326):DC(I18) DG(J327):DC(I17) DC(J328):DG(I16) DA(J329):DT(I15) DC(J330):DG(I14) DC(J331):DG(I13) DG(J332):DC(I12) DG(J333):DC(I11) DG(J334):DC(I10) DA(J335):DT(I9) DT(J336):DA(I8) DT(J337):DA(I7) DC(J338):DG(I6) DT(J339):DA(I5) DC(J340):DG(I4) DG(J341):DC(I3) DA(J342):DT(I2) DT(J343):DA(I1) DA(J344):DT(I0) DT(J345):DA(I-1) DC(J346):DG(I-2) DG(J347):DC(I-3) DA(J348):DT(I-4) DA(J349):DT(I-5) DT(J350):DA(I-6) chaine ( 3) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger >8jkl_CD: title=IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GATA MOTIF organism=Homo sapiens DNA sequence DG(B1):DC(A19) DG(B2):DC(A18) DT(B3):DA(A17) DT(B4):DA(A16) DT(B5):DA(A15) DC(B6):DG(A14) DT(B7):DA(A13) DC(B8):DG(A12) DG(B9):DC(A11) DG(B10):DC(A10) DT(B11):DA(A9) DA(B12):DT(A8) DT(B13):DA(A7) DC(B14):DG(A6) DA(B15):DT(A5) DG(B16):DC(A4) DT(B17):DA(A3) DT(B18):DA(A2) DG(B19):DC(A1) chainC ( 75) THR95 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 ( 78) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 ( 79) CYS99 0 0 0 0 0 0 0 0 0 0 1 3 2 0 0 0 0 0 0 ( 83) LYS103 0 0 0 0 0 0 0 0 2 15 6 0 0 0 0 0 0 0 0 chainD ( 37) LYS59 0 0 0 0 0 0 0 0 0 0 0 3 2 2 0 0 0 0 0 ( 76) ARG98 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 ( 77) CYS99 0 0 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 ( 78) ALA100 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) LYS103 0 0 0 2 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelversqldisdpykvyrivp/klrqwlidqidsgkypglvweneeksifripwkhagKqdynreedaalfkawalfkgkfregidkpdpptwktrlRCAlnKsndfeelversqldisdpykvyrivpe >8jkl_G:"Winged_helix"_DNA-binding_domain; title=IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GATA MOTIF organism=Homo sapiens DNA sequence DA(E2):DT(F18) DA(E3):DT(F17) DC(E4):DG(F16) DT(E5):DA(F15) DG(E6):DC(F14) DA(E7):DT(F13) DT(E8):DA(F12) DA(E9):DT(F11) DC(E10):DG(F10) DC(E11):DG(F9) DG(E12):DC(F8) DA(E13):DT(F7) DG(E14):DC(F6) DA(E15):DT(F5) DA(E16):DT(F4) DA(E17):DT(F3) DC(E18):DG(F2) DC(E19):DG(F1) chainG ( 75) THR95 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG98 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) CYS99 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 ( 83) LYS103 0 0 0 0 0 0 0 3 14 1 0 0 0 0 0 0 0 0 prot.sequence ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelvisdpykvyrivpe >8jkl_GH: title=IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GATA MOTIF organism=Homo sapiens DNA sequence DG(F1):DC(E19) DG(F2):DC(E18) DT(F3):DA(E17) DT(F4):DA(E16) DT(F5):DA(E15) DC(F6):DG(E14) DT(F7):DA(E13) DC(F8):DG(E12) DG(F9):DC(E11) DG(F10):DC(E10) DT(F11):DA(E9) DA(F12):DT(E8) DT(F13):DA(E7) DC(F14):DG(E6) DA(F15):DT(E5) DG(F16):DC(E4) DT(F17):DA(E3) DT(F18):DA(E2) chainG ( 75) THR95 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 ( 78) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 ( 79) CYS99 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 83) LYS103 0 0 0 0 0 0 0 0 1 14 3 0 0 0 0 0 0 0 chainH ( 2) LYS23 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) LYS59 0 0 0 0 0 0 0 0 0 0 0 1 5 5 0 0 0 0 ( 77) ARG98 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 ( 78) CYS99 0 0 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 ( 79) ALA100 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LYS103 0 0 0 5 6 8 2 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkTrlRCalnKsndfeelvisdpykvyrivpe/gKlrqwlidqidsgkypglvweneeksifripwkhagKqdynreedaalfkawalfkgkfregidkpdpptwktrlRCAlnKsndfeelversqldisdpykvyrivp >8jkn_G:"Winged_helix"_DNA-binding_domain; title=T95R MUTANT IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GAAA MOTIF organism=Homo sapiens DNA sequence DG(F1):DC(E19) DG(F2):DC(E18) DT(F3):DA(E17) DT(F4):DA(E16) DT(F5):DA(E15) DC(F6):DG(E14) DT(F7):DA(E13) DC(F8):DG(E12) DG(F9):DC(E11) DG(F10):DC(E10) DT(F11):DA(E9) DT(F12):DA(E8) DT(F13):DA(E7) DC(F14):DG(E6) DA(F15):DT(E5) DG(F16):DC(E4) DT(F17):DA(E3) DT(F18):DA(E2) DG(F19):DC(E1) chainG ( 75) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 ( 78) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 ( 79) CYS99 0 0 0 0 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 ( 83) LYS103 0 0 0 0 0 0 0 0 1 14 5 0 0 0 0 0 0 0 0 prot.sequence ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkRrlRCalnKsndfeelversqldisdpykvyrivp >8jko_G:"Winged_helix"_DNA-binding_domain; title=T95R MUTANT IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GATA MOTIF organism=Homo sapiens DNA sequence DG(F1):DC(E19) DG(F2):DC(E18) DT(F3):DA(E17) DT(F4):DA(E16) DT(F5):DA(E15) DC(F6):DG(E14) DT(F7):DA(E13) DC(F8):DG(E12) DG(F9):DC(E11) DG(F10):DC(E10) DT(F11):DA(E9) DA(F12):DT(E8) DT(F13):DA(E7) DC(F14):DG(E6) DA(F15):DT(E5) DG(F16):DC(E4) DT(F17):DA(E3) DT(F18):DA(E2) DG(F19):DC(E1) chainG ( 75) ARG95 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 ( 78) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 0 0 0 0 ( 79) CYS99 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 ( 83) LYS103 0 0 0 0 0 0 0 0 1 12 7 0 0 0 0 0 0 0 0 prot.sequence ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkRrlRCalnKsndfeelversqldisdpykvyrivp >8jkq_DG: title=T95R MUTANT IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GACA MOTIF organism=Homo sapiens DNA sequence DG(B1):DC(A19) DG(B2):DC(A18) DT(B3):DA(A17) DT(B4):DA(A16) DT(B5):DA(A15) DC(B6):DG(A14) DT(B7):DA(A13) DC(B8):DG(A12) DG(B9):DC(A11) DG(B10):DC(A10) DT(B11):DA(A9) DG(B12):DC(A8) DT(B13):DA(A7) DC(B14):DG(A6) DA(B15):DT(A5) DG(B16):DC(A4) DT(B17):DA(A3) DT(B18):DA(A2) DG(B19):DC(A1) chainD ( 74) ARG95 0 0 0 0 0 0 0 0 0 0 0 3 5 0 2 0 0 0 0 ( 77) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 ( 78) CYS99 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 82) LYS103 0 0 0 0 0 0 0 0 5 13 4 0 0 0 0 0 0 0 0 chainG ( 73) ARG95 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) ARG98 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 ( 77) CYS99 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ALA100 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 81) LYS103 0 0 0 1 9 11 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ngklrqwlidqidsgkyplvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkRrlRCalnKsndfeelversqldisdpykvyrivp/gklrqwlidqidsgkypglvweneeksifripwkhakqdynreedaalfkawalfkgkfregidkpdpptwkRrlRCAlnKsndfeelversqldisdpykvyrivpe >8jkq_FH: title=T95R MUTANT IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GACA MOTIF organism=Homo sapiens DNA sequence DG(E1):DC(C19) DG(E2):DC(C18) DT(E3):DA(C17) DT(E4):DA(C16) DT(E5):DA(C15) DC(E6):DG(C14) DT(E7):DA(C13) DC(E8):DG(C12) DG(E9):DC(C11) DG(E10):DC(C10) DT(E11):DA(C9) DG(E12):DC(C8) DT(E13):DA(C7) DC(E14):DG(C6) DA(E15):DT(C5) DG(E16):DC(C4) DT(E17):DA(C3) DT(E18):DA(C2) DG(E19):DC(C1) chainF ( 69) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 ( 70) CYS99 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 74) LYS103 0 0 0 0 0 0 0 0 0 11 6 0 0 0 0 0 0 0 0 chainH ( 78) CYS99 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ALA100 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LYS103 0 0 0 1 8 8 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkdpptwkrlRCalnKsndfeelversqldisdpykvyrivp/gklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkrrlrCAlnKsndfeelversqldisdpykvyrivpe >8jkq_H:"Winged_helix"_DNA-binding_domain; title=T95R MUTANT IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GACA MOTIF organism=Homo sapiens DNA sequence DG(E1):DC(C19) DG(E2):DC(C18) DT(E3):DA(C17) DT(E4):DA(C16) DT(E5):DA(C15) DC(E6):DG(C14) DT(E7):DA(C13) DC(E8):DG(C12) DG(E9):DC(C11) DG(E10):DC(C10) DT(E11):DA(C9) DG(E12):DC(C8) DT(E13):DA(C7) DC(E14):DG(C6) DA(E15):DT(C5) DG(E16):DC(C4) DT(E17):DA(C3) DT(E18):DA(C2) DG(E19):DC(C1) chainH ( 78) CYS99 0 0 0 0 1 4 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ALA100 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LYS103 0 0 0 1 8 8 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkrrlrCAlnKsndfeelversqldisdpykvyrivpe >8jks_CD: title=T95R MUTANT IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GAGA MOTIF organism=Homo sapiens DNA sequence DC(A1):DG(B19) DA(A2):DT(B18) DA(A3):DT(B17) DC(A4):DG(B16) DT(A5):DA(B15) DG(A6):DC(B14) DA(A7):DT(B13) DG(A8):DC(B12) DA(A9):DT(B11) DC(A10):DG(B10) DC(A11):DG(B9) DG(A12):DC(B8) DA(A13):DT(B7) DG(A14):DC(B6) DA(A15):DT(B5) DA(A16):DT(B4) DA(A17):DT(B3) DC(A18):DG(B2) DC(A19):DG(B1) chainC ( 75) ARG95 0 0 0 0 1 0 6 7 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG98 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) CYS99 0 0 0 0 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 ( 83) LYS103 0 0 0 0 0 0 0 0 4 12 2 0 0 0 0 0 0 0 0 chainD ( 35) HIS56 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 ( 74) ARG95 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 77) ARG98 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 ( 78) CYS99 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 0 0 0 0 ( 79) ALA100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 82) LYS103 0 0 0 0 0 0 0 0 0 0 0 0 0 12 10 3 0 0 0 prot.sequence ngklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkRrlRCalnKsndfeelversqldisdpykvyrivp/gklrqwlidqidsgkypglvweneeksifripwkHagkqdynreedaalfkawalfkgkfregidkpdpptwkRrlRCAlnKsndfeelversqldisdpykvyrivpe >8jks_D:"Winged_helix"_DNA-binding_domain; title=T95R MUTANT IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GAGA MOTIF organism=Homo sapiens DNA sequence DG(B1):DC(A19) DG(B2):DC(A18) DT(B3):DA(A17) DT(B4):DA(A16) DT(B5):DA(A15) DC(B6):DG(A14) DT(B7):DA(A13) DC(B8):DG(A12) DG(B9):DC(A11) DG(B10):DC(A10) DT(B11):DA(A9) DC(B12):DG(A8) DT(B13):DA(A7) DC(B14):DG(A6) DA(B15):DT(A5) DG(B16):DC(A4) DT(B17):DA(A3) DT(B18):DA(A2) DG(B19):DC(A1) chainD ( 35) HIS56 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 74) ARG95 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG98 0 0 0 0 0 0 0 5 9 0 0 0 0 0 0 0 0 0 0 ( 78) CYS99 0 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ALA100 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LYS103 0 0 0 3 10 12 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gklrqwlidqidsgkypglvweneeksifripwkHagkqdynreedaalfkawalfkgkfregidkpdpptwkRrlRCAlnKsndfeelversqldisdpykvyrivpe >8jks_GH: title=T95R MUTANT IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GAGA MOTIF organism=Homo sapiens DNA sequence DG(F1):DC(E19) DG(F2):DC(E18) DT(F3):DA(E17) DT(F4):DA(E16) DT(F5):DA(E15) DC(F6):DG(E14) DT(F7):DA(E13) DC(F8):DG(E12) DG(F9):DC(E11) DG(F10):DC(E10) DT(F11):DA(E9) DC(F12):DG(E8) DT(F13):DA(E7) DC(F14):DG(E6) DA(F15):DT(E5) DG(F16):DC(E4) DT(F17):DA(E3) DT(F18):DA(E2) DG(F19):DC(E1) chainG ( 74) ARG95 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 ( 77) ARG98 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 ( 78) CYS99 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 ( 82) LYS103 0 0 0 0 0 0 0 0 0 11 8 0 0 0 0 0 0 0 0 chainH ( 35) HIS56 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 74) ARG95 0 0 0 0 0 2 6 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG98 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 ( 78) CYS99 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) ALA100 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 82) LYS103 0 0 0 1 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gklrqwlidqidsgkypglvweneeksifripwkhagkqdynreedaalfkawalfkgkfregidkpdpptwkRrlRCalnKsndfeelversqldisdpykvyrivp/gklrqwlidqidsgkypglvweneeksifripwkHagkqdynreedaalfkawalfkgkfregidkpdpptwkRrlRCAlnKsndfeelversqldisdpykvyrivpe >8jl9_ABCDEFGH: title=CRYO-EM STRUCTURE OF THE HUMAN NUCLEOSOME WITH SCFV organism=? DNA sequence DC(I-77):DG(J77) DT(I-76):DA(J76) DA(I-75):DT(J75) DG(I-74):DC(J74) DG(I-73):DC(J73) DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DC(I-68):DG(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DG(I68):DC(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) DC(I73):DG(J-73) DC(I74):DG(J-74) DT(I75):DA(J-75) DA(I76):DT(J-76) DG(I77):DC(J-77) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/dNIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/rSrkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/dNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirDavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/rSrkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8jla_ABCDEFGH: title=CRYO-EM STRUCTURE OF THE HUMAN NUCLEOSOME LACKING N-TERMINAL REGION OF H2A, H2B, H3, AND H4 organism=? DNA sequence DC(J-77):DG(I77) DT(J-76):DA(I76) DA(J-75):DT(I75) DG(J-74):DC(I74) DG(J-73):DC(I73) DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DA(J-69):DT(I69) DC(J-68):DG(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DG(J-2):DC(I2) DA(J-1):DT(I1) DT(J0):DA(I0) DT(J1):DA(I-1) DC(J2):DG(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DG(J68):DC(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) DC(J73):DG(I-73) DC(J74):DG(I-74) DT(J75):DA(I-75) DA(J76):DT(I-76) DG(J77):DC(I-77) DC(J78):DG(I-78) chainA ( 2) HIS39 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/nIQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/SrkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/niQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdaVtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/SrkesysiyvykvlkqvhpdtgisskamgimNsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8jlb_A:Histone-fold; title=CRYO-EM STRUCTURE OF THE 145 BP HUMAN NUCLEOSOME CONTAINING H3.2 C110A MUTANT organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 1) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence HRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge >8jlb_ABCDEFGH: title=CRYO-EM STRUCTURE OF THE 145 BP HUMAN NUCLEOSOME CONTAINING H3.2 C110A MUTANT organism=? DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 1) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence HRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/NIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/hRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/nIQgitkpairrlarrggvkrisgliYeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8jld_A:Histone-fold; title=CRYO-EM STRUCTURE OF THE 145 BP HUMAN NUCLEOSOME CONTAINING ACETYLATED H3 TAIL organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 1) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence HRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge >8jld_ABCDEFGH: title=CRYO-EM STRUCTURE OF THE 145 BP HUMAN NUCLEOSOME CONTAINING ACETYLATED H3 TAIL organism=? DNA sequence DA(J-72):DT(I72) DT(J-71):DA(I71) DC(J-70):DG(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DG(J70):DC(I-70) DA(J71):DT(I-71) DT(J72):DA(I-72) chainA ( 1) HIS39 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence HRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/NIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/hRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge/nIqgitkpairrlarrggvkrisgliYeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp/sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8jo2_CDFHI:cAMP-binding_domain-like;"Winged_helix"_DNA-binding_domain;P-loop_containing_nucleoside_triphosphate_hydrolases;Putative_DNA-binding_domain;beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase;Nucleic_acid-binding_proteins;Rho_N-terminal_domain-like;Probable_bacterial_effector-binding_domain;Homeodomain-like;Insert_subdomain_of_RNA_polymerase_alpha_subunit;RBP11-like_subunits_of_RNA_polymerase;C-terminal_domain_of_RNA_polymerase_alpha_subunit;lambda_repressor-like_DNA-binding_domains;CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=STRUCTURAL BASIS OF TRANSCRIPTIONAL ACTIVATION BY THE OMPR/PHOB- FAMILY RESPONSE REGULATOR PMRA organism=? DNA sequence DC(21):DG(114) DG(22):DC(113) DC(23):DG(112) DC(24):DG(111) DG(25):DC(110) DC(26):DG(19) DG(27):DC(18) DT(28):DA(17) DC(29):DG(16) DA(210):DT(15) DG(211):DC(14) DA(212):DT(13) DC(213):DG(12) DT(214):DA(11) DC(215):DC(1-1) DG(216):DG(1-2) DT(217):DT(1-3) DA(218):DG(1-4) DG(219):DT(1-5) DG(220):DG(1-6) DA(221):DT(1-7) DT(222):DA(1-8) DT(223):DA(1-9) DA(224):DT(1-10) DT(225):DA(1-11) DA(226):DT(1-12) DC(227):DG(1-13) DG(228):DC(1-14) DA(229):DT(1-15) DC(230):DG(1-16) DC(231):DG(1-17) DT(232):DA(1-18) DT(233):DA(1-19) DG(234):DC(1-20) DC(235):DG(1-21) DT(236):DA(1-22) DT(237):DA(1-23) DA(238):DT(1-24) DG(239):DC(1-25) DG(240):DC(1-26) DA(241):DT(1-27) DT(242):DA(1-28) DA(243):DT(1-29) DA(244):DT(1-30) DT(245):DA(1-31) DA(246):DT(1-32) DT(247):DA(1-33) DT(248):DA(1-34) DA(249):DT(1-35) DA(250):DT(1-36) DG(251):DC(1-37) DA(252):DT(1-38) DA(253):DT(1-39) DA(254):DT(1-40) DT(255):DA(1-41) DT(256):DA(1-42) DA(257):DT(1-43) DA(258):DT(1-44) DT(259):DA(1-45) DA(260):DT(1-46) DT(261):DA(1-47) DT(262):DA(1-48) DT(263):DA(1-49) DC(264):DG(1-50) DT(265):DA(1-51) chainC (180) SER182 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) GLU187 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) ARG197 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ASP199 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG200 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) TYR367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (369) ARG371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (372) GLU374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (468) ARG470 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) ARG473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (495) PRO497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (502) GLU504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (506) SER508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (512) PHE514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (540) ARG542 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (106) LEU120 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (300) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (306) ASN320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (308) ARG322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) LYS334 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) THR790 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (777) ALA791 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 18) ASP96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 20) VAL98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 24) MET102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 27) MET105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 34) THR112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) GLU116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (269) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (270) LEU386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (280) ASN396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (281) ARG397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (303) PHE419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) GLU420 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (307) ARG423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) TYR425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (312) SER428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (313) THR429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (314) TYR430 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) THR432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (317) TRP433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) TRP434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (321) GLN437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (338) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) HIS455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) ASN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (348) ASN464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (349) ARG465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (393) THR509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (394) PRO510 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (395) ILE511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (397) ASP513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ASP516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (401) SER517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (406) PHE522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (472) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH (187) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) ASN188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) GLU191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) VAL192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) HIS195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) ARG210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (187) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) ASN188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) GLU191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) VAL192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (193) HIS193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) ARG210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynariipyrgSWldfEfdpkdnlfvRiDRrrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiYrmmRpgEpptreaaeslfenlffsedRydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvRveRavkerlslgdldtlmpqdminakPisaavkEffgSsqlsqFmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkgetqltpeekllraifgekasdvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/eefdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflksLpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpldggrfatsdlndlyrrvinrnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaitgsNkRplksladmikgKqgrfrqnllgkrvdysgrsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalkTAnsgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmaaaessiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqesggtkditgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpvdgsdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrraag/aaaqvlssveseigrttDpVRmyMreMgtveLlTregEidiakriedginqvqcsvaeypeaitylleqydrveaeearlsdlitgfvdpnaensidpelarekfaelraqyvvtrdtikakgrshataqeeilklsevfkqfrlvpkqfdylvnsmrvmmdrvrtqerlimklcveqckmpkknfitlftgnetsdtwfnaaiamnkpwseklhdvseevhralqklqqieeetgltieqvkdinrrmsigeakarrakkemveaNlRLvisiakkytNRglqfldliqegniglmkavdkFEyrRgYkfSTYaTWWirQaitrsiadqartiripVHmietiNklNRisrqmlqemgreptpeelaermlmpedkirkvlkiakepismeTPIgDdeDShlgdFiedttlelpldsatteslraathdvlagltareakvlrmrfgidmntdytleevgkqfdvtreriRqieakalrklrhpsrsevlrsfldd/mkilvieddalllqglilamqsegyvcdgvstaheaalslasnhyslivldlglpdedglhflsrmrrekmtqpvliltardtledrisgldtgaddylvkpfaleelnarirallrrhnnqgdneisvgnlrlnvtrrlvwlgetaldltpkeyallsrlmmkagspvhreilyndiysgdnepaTNtlEVhiHnlrekigksrirtvRgfgymlann/mkilvieddalllqglilamqsegyvcdgvstaheaalslasnhyslivldlglpdedglhflsrmrrekmtqpvliltardtledrisgldtgaddylvkpfaleelnarirallrrhnnqgdneisvgnlrlnvtrrlvwlgetaldltpkeyallsrlmmkagspvhreilyndiysgdnepaTNtlEVHihnlrekigksrirtvRgfgymlann >8jo2_H:CheY-like;C-terminal_effector_domain_of_the_bipartite_response_regulators; title=STRUCTURAL BASIS OF TRANSCRIPTIONAL ACTIVATION BY THE OMPR/PHOB- FAMILY RESPONSE REGULATOR PMRA organism=? DNA sequence DC(21):DG(114) DG(22):DC(113) DC(23):DG(112) DC(24):DG(111) DG(25):DC(110) DC(26):DG(19) DG(27):DC(18) DT(28):DA(17) DC(29):DG(16) DA(210):DT(15) DG(211):DC(14) DA(212):DT(13) DC(213):DG(12) DT(214):DA(11) DC(215):DC(1-1) DG(216):DG(1-2) DT(217):DT(1-3) DA(218):DG(1-4) DG(219):DT(1-5) DG(220):DG(1-6) DA(221):DT(1-7) DT(222):DA(1-8) DT(223):DA(1-9) DA(224):DT(1-10) DT(225):DA(1-11) DA(226):DT(1-12) DC(227):DG(1-13) DG(228):DC(1-14) DA(229):DT(1-15) DC(230):DG(1-16) DC(231):DG(1-17) DT(232):DA(1-18) DT(233):DA(1-19) DG(234):DC(1-20) DC(235):DG(1-21) DT(236):DA(1-22) DT(237):DA(1-23) DA(238):DT(1-24) DG(239):DC(1-25) DG(240):DC(1-26) DA(241):DT(1-27) DT(242):DA(1-28) DA(243):DT(1-29) DA(244):DT(1-30) DT(245):DA(1-31) DA(246):DT(1-32) DT(247):DA(1-33) DT(248):DA(1-34) DA(249):DT(1-35) DA(250):DT(1-36) DG(251):DC(1-37) DA(252):DT(1-38) DA(253):DT(1-39) DA(254):DT(1-40) DT(255):DA(1-41) DT(256):DA(1-42) DA(257):DT(1-43) DA(258):DT(1-44) DT(259):DA(1-45) DA(260):DT(1-46) DT(261):DA(1-47) DT(262):DA(1-48) DT(263):DA(1-49) DC(264):DG(1-50) DT(265):DA(1-51) chainH (187) THR187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) ASN188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) GLU191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) VAL192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) HIS195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (210) ARG210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkilvieddalllqglilamqsegyvcdgvstaheaalslasnhyslivldlglpdedglhflsrmrrekmtqpvliltardtledrisgldtgaddylvkpfaleelnarirallrrhnnqgdneisvgnlrlnvtrrlvwlgetaldltpkeyallsrlmmkagspvhreilyndiysgdnepaTNtlEVhiHnlrekigksrirtvRgfgymlann >8k3d_A: title=CRYSTAL STRUCTURE OF NRF1 DBD BOUND TO DNA organism=Homo sapiens DNA sequence DG(C1) DG(C2) DT(C3) DG(C4) DC(C5) DG(C6) DC(C7) DA(C8) DT(C9) DG(C10) DC(C11) DG(C12) DC(C13) DA(C14) DC(C15) DC(C16) chainA ( 24) GLN202 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ALA203 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 28) ARG206 0 0 14 12 4 0 0 0 0 0 0 0 0 0 0 0 ( 43) LYS221 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 ( 66) ARG244 0 0 0 0 15 16 3 0 0 0 0 0 0 0 0 0 ( 67) SER245 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qevnselppltidgipvsvdkmtQAqlRafipemlkystgrgKpgwgkesckpiwwpedipwanvRSdvrteeqkqrvswtqalrtivkncykqhgredllyafe >8k4l_A: title=CRYSTAL STRUCTURE OF NRF1 HOMODIMER IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DA(C1):DT(D14) DT(C2):DA(D13) DG(C3):DC(D12) DC(C4):DG(D11) DG(C5):DC(D10) DC(C6):DG(D9) DA(C7):DT(D8) DT(C8):DA(D7) DG(C9):DC(D6) DC(C10):DG(D5) DG(C11):DC(D4) DC(C12):DG(D3) DA(C13):DT(D2) DT(C14):DA(D1) chainA (135) GLN202 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (136) ALA203 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (139) ARG206 0 0 0 0 8 12 13 0 0 0 0 0 0 0 (175) ASN242 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (177) ARG244 0 0 11 16 13 0 0 0 0 0 0 0 0 0 (178) SER245 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence nstaadevtahlaaagpvgmaaaaavatgkkrkrphvfesnpsirkrqqtrllrklratldeyttrvgqqaivlcispskpnpvfkvfgaaplenvvrkyksmiledlesalaenselppltidgipvsvdkmtQAqlRafipemlkystgrgkpgwgkesckpiwwpedipwaNvRSdvrteeqkqrvswtqalrtivkncykqhgredllyafe >8k4l_AB: title=CRYSTAL STRUCTURE OF NRF1 HOMODIMER IN COMPLEX WITH DNA organism=Homo sapiens DNA sequence DA(C1):DT(D14) DT(C2):DA(D13) DG(C3):DC(D12) DC(C4):DG(D11) DG(C5):DC(D10) DC(C6):DG(D9) DA(C7):DT(D8) DT(C8):DA(D7) DG(C9):DC(D6) DC(C10):DG(D5) DG(C11):DC(D4) DC(C12):DG(D3) DA(C13):DT(D2) DT(C14):DA(D1) chainA (135) GLN202 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (136) ALA203 0 0 0 0 0 0 1 0 0 0 0 0 0 0 (139) ARG206 0 0 0 0 8 12 13 0 0 0 0 0 0 0 (175) ASN242 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (177) ARG244 0 0 11 16 13 0 0 0 0 0 0 0 0 0 (178) SER245 0 0 0 0 2 0 0 0 0 0 0 0 0 0 chainB ( 98) GLN202 0 0 0 0 0 0 0 8 0 0 0 0 0 0 ( 99) ALA203 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (102) ARG206 0 0 0 0 0 0 0 13 12 7 0 0 0 0 (138) ASN242 0 0 0 0 0 0 0 0 0 0 0 7 0 0 (140) ARG244 0 0 0 0 0 0 0 0 0 16 16 12 0 0 (141) SER245 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence nstaadevtahlaaagpvgmaaaaavatgkkrkrphvfesnpsirkrqqtrllrklratldeyttrvgqqaivlcispskpnpvfkvfgaaplenvvrkyksmiledlesalaenselppltidgipvsvdkmtQAqlRafipemlkystgrgkpgwgkesckpiwwpedipwaNvRSdvrteeqkqrvswtqalrtivkncykqhgredllyafe/hvfesnpsirkrqqtrllrklratldeyttrvgqqaivlcispskpnpvfkvfgaaplenvvrkyksmiledlesalaselppltidgipvsvdkmtQAqlRafipemlkystgrgkpgwgkesckpiwwpedipwaNvRSdvrteeqkqrvswtqalrtivkncykqhgredllyaf >8k9g_AB: title=CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA DIMER (CONFORMATION-1) organism=? DNA sequence DA(D44) DC(D43) DT(D42) DC(D41) DC(D40) DA(D39) DT(D38) DC(D37) DA(D22) DA(D23) DA(D24) DC(D25) DT(D26) DA(D27) DT(D28) DA(D29) DC(D30) DA(D31) DA(D32) DC(D33) DC(D34) DT(D35) DA(D36):DC(D37) chainA (235) LYS287 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) SER391 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (289) LYS289 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (358) HIS358 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) GLU438 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) ASP442 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mkeliyieepsilfahgqkctdprdglalfgplnqiygiksgvvgtqkglqifksyldkiqkpiynhnnitrpmfpgfeavfgckwesqnivfkeitdeeirrylfnasthkrtydlvtlfndkiitankndeervdvwfvivpeeiykycaqfhdqlkarllehtiptqilrestlawrdfkntfgapirdfskieghlawtistaayykaggkpwklgdirpgvcylglvykKieksknpqnaccaaqmfldngdgtvfkgevgpwynpekgeyhlkpkeakalltqalesykeqnksypkevfihartrfndeewnafnevtpkntnlvgvtitkSkplklyktegafpimrgnayivdekkaflwtlgfvpklqstlsMevpnpifieinkgeaeiqqvlkdilaltklnynaciyadgepvtlrfankigeiltasteiktpplafkyyi/mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqrlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrRkqgknwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvladiNNfeEdteDldeledie >8k9g_B:Toll/Interleukin_receptor_TIR_domain; title=CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA DIMER (CONFORMATION-1) organism=? DNA sequence DA(D44) DC(D43) DT(D42) DC(D41) DC(D40) DA(D39) DT(D38) DC(D37) DA(D22) DA(D23) DA(D24) DC(D25) DT(D26) DA(D27) DT(D28) DA(D29) DC(D30) DA(D31) DA(D32) DC(D33) DC(D34) DT(D35) DA(D36):DC(D37) chainB (289) LYS289 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (358) HIS358 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) GLU438 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) ASP442 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqrlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrRkqgknwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvladiNNfeEdteDldeledie >8k9g_EF: title=CRYO-EM STRUCTURE OF CRT-SPARTA-GRNA-TDNA DIMER (CONFORMATION-1) organism=? DNA sequence DA(H22) DA(H23) DA(H24) DC(H25) DT(H26) DA(H27) DT(H28) DA(H29) DC(H30) DA(H31) DA(H32) DC(H33) DC(H34) DT(H35) DA(H36) DC(H37) DT(H38) DA(H39) DC(H40) DC(H41) DT(H42) DC(H43) DA(H44) DT(H45) chainE (311) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (340) SER391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 chainF (263) ARG263 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (289) LYS289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 (431) ALA431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (434) ASN434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (435) ASN435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (438) GLU438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 (442) ASP442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 prot.sequence mkeliyieepsilfahgqkctdprdglalfgplnqiygiksgvvgtqkglqifksyldkiqkpiynhnnitrpmfpgfeavfgckwesqnivfkeitdeeirrylfnasthkrtydlvtlfndkiitankndeervdvwfvivpeeiykycraqfhdqlkarllehtiptqilrestlawrdfkntfgapirdfskieghlawtistaayykaggkpwklgdirpgvcylglvykkieksknpqnaccaaqmfldngdgtvfkgevgpwynpekgeyhlkpkeakalltqalesykeqnksypkevfihaRtrfndeewnafnevtpkntnlvgvtitkSkplklyktegafpimrgnayivdekkaflwtlgfvpklqstlsmevpnpifieinkgeaeiqqvlkdilaltklnynaciyadgepvtlrfankigeiltasteiktpplafkyyi/mrnkifishatpedddftrwlslkliglgyevwcdilfldkgvdfwstiekeirentckflivsstagnkregvlkelavatkvkkhlqddmfiiplaidenlsyddinieivrlnaidfkkswakglqdlldafekqnvpkkppdhsksnllyqqiflhdkqaiekeetydsnwfpiisfpnelrfhrydwrlpkqfdvrtlafpairykeylctfaweydfihqlpktetyngqesiristsdilsgrydtdfirnyecqRlivqlinkafelrmkdknvreyqmsKtfaywiekgklekdkfekiklvgkqknkywhfgisaagklypspvlmvsshiiftmdginliksksiqHssrrkqgknwwndkwrekllafirflsddqnaiylnvgseekilisnkplkffgkmsyvtpsevtleeesvlAdiNNfeEdteDldeledie >8kb5_ABCDEFGH: title=CRYO-EM STRUCTURE OF THE HUMAN NUCLEOSOME CONTAINING H3.8 organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DC(I-68):DG(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DG(I-2):DC(J2) DA(I-1):DT(J1) DA(I0):DT(J0) DT(I1):DA(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DG(I68):DC(J-68) DT(I69):DA(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainA ( 1) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 2) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 45) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence HRyrpgtvalreirhyqkstellirklpfqrlvreiaqdfktdlRfqraaigtlqeaseaylvglfedtnlcaihatrvtimpkdiqlarhirgerv/VLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RkesysiyvykvlkqvhpdtgisskamgimnSfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/hRyrpgtvalreirhyqkstellirklpfqrlvreiaqdfktdlRfqraaigtlqeaseaylvglfedtnlcaihatrvtimpkdiqlarhirgerv/vLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/RakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk/RkesysiyvykvlkqvhpdtgisskamgimnSfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8kcm_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=MMCPDII-DNA COMPLEX CONTAINING LOW-DOSAGE, LIGHT INDUCED REPAIRED DNA. organism=Methanosarcina mazei DNA sequence DT(F1):DA(E14) DG(F2):DC(E13) DC(F3):DG(E12) DG(F4):DC(E11) DC(F5):DG(E10) DG(F6):DC(E9) DA(F7):DT(E8) DA(F8):DT(E7) DG(F9):DC(E6) DC(F10):DG(E5) DC(F11):DG(E4) chainB (160) HIS161 0 0 0 0 0 0 0 0 0 1 4 (222) ARG256 0 0 0 0 0 0 5 8 0 0 0 (223) ASN257 0 0 0 0 0 0 4 0 0 0 0 (267) GLU301 0 0 0 0 0 0 0 11 0 0 0 (271) TRP305 0 0 0 0 0 0 0 41 0 0 0 (345) MET379 0 0 0 0 0 0 17 0 0 0 0 (387) TRP421 0 0 0 0 0 0 17 0 0 0 0 (395) ARG429 0 0 0 0 0 0 8 2 32 0 0 (397) TRP431 0 0 0 0 0 40 7 0 0 0 0 (407) ARG441 0 0 0 0 0 6 0 0 0 0 0 (416) ARG450 3 10 9 11 0 0 0 0 0 0 0 prot.sequence hmnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheYaaHtfrpklyallpefleefpelepnsvtpdplfepwhfepgekaakkvmesfiadrldsygalRNdptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgytrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekys >8kd3_R:Histone-fold; title=RPD3S IN COMPLEX WITH NUCLEOSOME WITH H3K36MLA MODIFICATION, H3K9Q MUTATION AND 187BP DNA organism=? DNA sequence DC(Y-75):DG(X75) DC(Y-74):DG(X74) DC(Y-73):DG(X73) DT(Y-72):DA(X72) DG(Y-71):DC(X71) DG(Y-70):DC(X70) DA(Y-69):DT(X69) DG(Y-68):DC(X68) DA(Y-67):DT(X67) DA(Y-66):DT(X66) DT(Y-65):DA(X65) DC(Y-64):DG(X64) DC(Y-63):DG(X63) DC(Y-62):DG(X62) DG(Y-61):DC(X61) DG(Y-60):DC(X60) DT(Y-59):DA(X59) DG(Y-58):DC(X58) DC(Y-57):DG(X57) DC(Y-56):DG(X56) DG(Y-55):DC(X55) DA(Y-54):DT(X54) DG(Y-53):DC(X53) DG(Y-52):DC(X52) DC(Y-51):DG(X51) DC(Y-50):DG(X50) DG(Y-49):DC(X49) DC(Y-48):DG(X48) DT(Y-47):DA(X47) DC(Y-46):DG(X46) DA(Y-45):DT(X45) DA(Y-44):DT(X44) DT(Y-43):DA(X43) DT(Y-42):DA(X42) DG(Y-41):DC(X41) DG(Y-40):DC(X40) DT(Y-39):DA(X39) DC(Y-38):DG(X38) DG(Y-37):DC(X37) DT(Y-36):DA(X36) DA(Y-35):DT(X35) DG(Y-34):DC(X34) DA(Y-33):DT(X33) DC(Y-32):DG(X32) DA(Y-31):DT(X31) DG(Y-30):DC(X30) DC(Y-29):DG(X29) DT(Y-28):DA(X28) DC(Y-27):DG(X27) DT(Y-26):DA(X26) DG(Y-24):DC(X24) DC(Y-23):DG(X23) DA(Y-22):DT(X22) DC(Y-21):DG(X21) DC(Y-20):DG(X20) DG(Y-19):DC(X19) DC(Y-18):DG(X18) DT(Y-17):DA(X17) DT(Y-16):DA(X16) DA(Y-15):DT(X15) DA(Y-14):DT(X14) DA(Y-13):DT(X13) DC(Y-12):DG(X12) DG(Y-11):DC(X11) DC(Y-10):DG(X10) DA(Y-9):DT(X9) DC(Y-8):DG(X8) DG(Y-7):DC(X7) DT(Y-6):DA(X6) DC(Y-4):DG(X4) DG(Y-3):DC(X3) DC(Y-2):DG(X2) DG(Y-1):DC(X1) DC(Y0):DG(X0) DT(Y1):DA(X-1) DG(Y2):DC(X-2) DT(Y3):DA(X-3) DC(Y4):DG(X-4) DC(Y6):DG(X-6) DC(Y7):DG(X-7) DC(Y8):DG(X-8) DG(Y9):DC(X-9) DC(Y10):DG(X-10) DG(Y11):DC(X-11) DT(Y12):DA(X-12) DT(Y13):DA(X-13) DT(Y14):DA(X-14) DT(Y15):DA(X-15) DA(Y17):DT(X-17) DC(Y19):DG(X-18) DG(Y20):DC(X-20) DC(Y21):DG(X-21) DC(Y22):DG(X-22) DA(Y23):DT(X-23) DA(Y24):DT(X-24) DG(Y25):DC(X-25) DG(Y26):DC(X-26) DG(Y27):DC(X-27) DG(Y28):DC(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DT(Y31):DA(X-31) DA(Y32):DT(X-32) DC(Y33):DG(X-33) DT(Y34):DA(X-34) DC(Y35):DG(X-35) DC(Y36):DG(X-36) DT(Y38):DG(X-37) DA(Y39):DT(X-39) DG(Y40):DC(X-40) DT(Y41):DA(X-41) DC(Y42):DG(X-42) DT(Y43):DA(X-43) DC(Y44):DG(X-44) DC(Y45):DG(X-45) DA(Y46):DT(X-46) DG(Y47):DC(X-47) DG(Y48):DC(X-48) DC(Y49):DG(X-49) DA(Y50):DT(X-50) DC(Y51):DG(X-51) DG(Y52):DC(X-52) DT(Y53):DA(X-53) DG(Y54):DC(X-54) DT(Y55):DA(X-55) DC(Y56):DG(X-56) DA(Y57):DT(X-57) DG(Y58):DC(X-58) DA(Y59):DT(X-59) DT(Y60):DA(X-60) DA(Y61):DT(X-61) DT(Y62):DA(X-62) DT(Y64):DA(X-64) DC(Y66):DG(X-66) DA(Y67):DT(X-67) DT(Y68):DA(X-68) DC(Y69):DG(X-69) DC(Y70):DG(X-70) DT(Y71):DA(X-71) DG(Y72):DC(X-72) DT(Y73):DA(X-73) DT(Y74):DA(X-74) DC(Y75):DG(X-75) DT(Y76):DA(X-76) DA(Y77):DT(X-77) DG(Y78):DC(X-78) DA(Y79):DT(X-79) DG(Y80):DC(X-80) DC(Y81):DG(X-81) DG(Y82):DC(X-82) DG(Y83):DC(X-83) DC(Y84):DG(X-84) DC(Y85):DG(X-85) DG(Y86):DC(X-86) DC(Y87):DG(X-87) DC(Y88):DG(X-88) chainR ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >8kd5_R:Histone-fold; title=RPD3S IN COMPLEX WITH NUCLEOSOME WITH H3K36MLA MODIFICATION AND 187BP DNA, CLASS2 organism=? DNA sequence DC(X-83):DG(Y83) DC(X-82):DG(Y82) DG(X-81):DC(Y81) DC(X-80):DG(Y80) DT(X-79):DA(Y79) DC(X-78):DG(Y78) DT(X-77):DA(Y77) DA(X-76):DT(Y76) DG(X-75):DC(Y75) DA(X-74):DT(Y74) DA(X-73):DT(Y73) DC(X-72):DG(Y72) DA(X-71):DT(Y71) DG(X-70):DC(Y70) DG(X-69):DC(Y69) DA(X-68):DT(Y68) DT(X-67):DA(Y67) DG(X-66):DC(Y66) DT(X-65):DA(Y65) DA(X-64):DT(Y64) DA(X-62):DT(Y62) DT(X-61):DA(Y61) DA(X-60):DT(Y60) DT(X-59):DA(Y59) DC(X-58):DG(Y58) DT(X-57):DA(Y57) DG(X-56):DC(Y56) DA(X-55):DT(Y55) DC(X-54):DG(Y54) DA(X-53):DT(Y53) DC(X-52):DG(Y52) DG(X-51):DC(Y51) DT(X-50):DA(Y50) DG(X-49):DC(Y49) DC(X-48):DG(Y48) DC(X-47):DG(Y47) DT(X-46):DA(Y46) DG(X-45):DC(Y45) DG(X-44):DC(Y44) DA(X-43):DT(Y43) DG(X-42):DC(Y42) DA(X-41):DT(Y41) DC(X-40):DG(Y40) DT(X-39):DA(Y39) DG(X-37):DT(Y38) DG(X-36):DC(Y36) DG(X-35):DC(Y35) DA(X-34):DT(Y34) DG(X-33):DC(Y33) DT(X-32):DA(Y32) DA(X-31):DT(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DC(X-28):DG(Y28) DC(X-27):DG(Y27) DC(X-26):DG(Y26) DC(X-25):DG(Y25) DT(X-24):DA(Y24) DT(X-23):DA(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DC(X-20):DG(Y20) DG(X-18):DC(Y19) DT(X-17):DA(Y17) DA(X-15):DT(Y15) DA(X-14):DT(Y14) DA(X-13):DT(Y13) DA(X-12):DT(Y12) DC(X-11):DG(Y11) DG(X-10):DC(Y10) DC(X-9):DG(Y9) DG(X-8):DC(Y8) DG(X-7):DC(Y7) DG(X-6):DC(Y6) DG(X-5):DC(Y5) DG(X-4):DC(Y4) DA(X-3):DT(Y3) DC(X-2):DG(Y2) DA(X-1):DT(Y1) DG(X0):DC(Y0) DC(X1):DG(Y-1) DG(X2):DC(Y-2) DC(X3):DG(Y-3) DG(X4):DC(Y-4) DA(X6):DT(Y-6) DC(X7):DG(Y-7) DG(X8):DC(Y-8) DT(X9):DA(Y-9) DG(X10):DC(Y-10) DC(X11):DG(Y-11) DG(X12):DC(Y-12) DT(X13):DA(Y-13) DT(X14):DA(Y-14) DT(X15):DA(Y-15) DA(X16):DT(Y-16) DA(X17):DT(Y-17) DG(X18):DC(Y-18) DC(X19):DG(Y-19) DG(X20):DC(Y-20) DG(X21):DC(Y-21) DT(X22):DA(Y-22) DG(X23):DC(Y-23) DC(X24):DG(Y-24) DT(X25):DA(Y-25) DA(X26):DT(Y-26) DG(X27):DC(Y-27) DA(X28):DT(Y-28) DG(X29):DC(Y-29) DC(X30):DG(Y-30) DT(X31):DA(Y-31) DG(X32):DC(Y-32) DT(X33):DA(Y-33) DC(X34):DG(Y-34) DT(X35):DA(Y-35) DA(X36):DT(Y-36) DC(X37):DG(Y-37) DG(X38):DC(Y-38) DA(X39):DT(Y-39) DC(X40):DG(Y-40) DC(X41):DG(Y-41) DA(X42):DT(Y-42) DA(X43):DT(Y-43) DT(X44):DA(Y-44) DT(X45):DA(Y-45) DG(X46):DC(Y-46) DA(X47):DT(Y-47) DG(X48):DC(Y-48) DC(X49):DG(Y-49) DG(X50):DC(Y-50) DG(X51):DC(Y-51) DC(X52):DG(Y-52) DC(X53):DG(Y-53) DT(X54):DA(Y-54) DC(X55):DG(Y-55) DG(X56):DC(Y-56) DG(X57):DC(Y-57) DC(X58):DG(Y-58) DA(X59):DT(Y-59) DC(X60):DG(Y-60) DC(X61):DG(Y-61) DG(X62):DC(Y-62) DG(X63):DC(Y-63) DG(X64):DC(Y-64) DA(X65):DT(Y-65) DT(X66):DA(Y-66) DT(X67):DA(Y-67) DC(X68):DG(Y-68) DT(X69):DA(Y-69) DC(X70):DG(Y-70) DC(X71):DG(Y-71) DA(X72):DT(Y-72) DG(X73):DC(Y-73) DG(X74):DC(Y-74) DG(X75):DC(Y-75) chainR ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts >8kd6_S:Histone-fold; title=RPD3S IN COMPLEX WITH NUCLEOSOME WITH H3K36MLA MODIFICATION AND 187BP DNA, CLASS3 organism=? DNA sequence DC(Y-75):DG(X75) DC(Y-74):DG(X74) DC(Y-73):DG(X73) DT(Y-72):DA(X72) DG(Y-71):DC(X71) DG(Y-70):DC(X70) DA(Y-69):DT(X69) DG(Y-68):DC(X68) DA(Y-67):DT(X67) DA(Y-66):DT(X66) DT(Y-65):DA(X65) DC(Y-64):DG(X64) DC(Y-63):DG(X63) DC(Y-62):DG(X62) DG(Y-61):DC(X61) DG(Y-60):DC(X60) DT(Y-59):DA(X59) DG(Y-58):DC(X58) DC(Y-57):DG(X57) DC(Y-56):DG(X56) DG(Y-55):DC(X55) DA(Y-54):DT(X54) DG(Y-53):DC(X53) DG(Y-52):DC(X52) DC(Y-51):DG(X51) DC(Y-50):DG(X50) DG(Y-49):DC(X49) DC(Y-48):DG(X48) DT(Y-47):DA(X47) DC(Y-46):DG(X46) DA(Y-45):DT(X45) DA(Y-44):DT(X44) DT(Y-43):DA(X43) DT(Y-42):DA(X42) DG(Y-41):DC(X41) DG(Y-40):DC(X40) DT(Y-39):DA(X39) DC(Y-38):DG(X38) DG(Y-37):DC(X37) DT(Y-36):DA(X36) DA(Y-35):DT(X35) DG(Y-34):DC(X34) DA(Y-33):DT(X33) DC(Y-32):DG(X32) DA(Y-31):DT(X31) DG(Y-30):DC(X30) DC(Y-29):DG(X29) DT(Y-28):DA(X28) DC(Y-27):DG(X27) DT(Y-26):DA(X26) DA(Y-25):DT(X25) DG(Y-24):DC(X24) DC(Y-23):DG(X23) DA(Y-22):DT(X22) DC(Y-21):DG(X21) DC(Y-20):DG(X20) DG(Y-19):DC(X19) DC(Y-18):DG(X18) DT(Y-17):DA(X17) DT(Y-16):DA(X16) DA(Y-15):DT(X15) DA(Y-14):DT(X14) DA(Y-13):DT(X13) DC(Y-12):DG(X12) DG(Y-11):DC(X11) DC(Y-10):DG(X10) DA(Y-9):DT(X9) DC(Y-8):DG(X8) DG(Y-7):DC(X7) DT(Y-6):DA(X6) DA(Y-5):DT(X5) DC(Y-4):DG(X4) DG(Y-3):DC(X3) DC(Y-2):DG(X2) DG(Y-1):DC(X1) DC(Y0):DG(X0) DT(Y1):DA(X-1) DG(Y2):DC(X-2) DT(Y3):DA(X-3) DC(Y4):DG(X-4) DC(Y5):DG(X-5) DC(Y6):DG(X-6) DC(Y7):DG(X-7) DC(Y8):DG(X-8) DG(Y9):DC(X-9) DC(Y10):DG(X-10) DG(Y11):DC(X-11) DT(Y12):DA(X-12) DT(Y13):DA(X-13) DT(Y14):DA(X-14) DT(Y15):DA(X-15) DA(Y16):DT(X-16) DA(Y17):DT(X-17) DC(Y18):DG(X-18) DC(Y19):DG(X-19) DG(Y20):DC(X-20) DC(Y21):DG(X-21) DC(Y22):DG(X-22) DA(Y23):DT(X-23) DA(Y24):DT(X-24) DG(Y25):DC(X-25) DG(Y26):DC(X-26) DG(Y27):DC(X-27) DG(Y28):DC(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DT(Y31):DA(X-31) DA(Y32):DT(X-32) DC(Y33):DG(X-33) DT(Y34):DA(X-34) DC(Y35):DG(X-35) DC(Y36):DG(X-36) DC(Y37):DG(X-37) DT(Y38):DA(X-38) DA(Y39):DT(X-39) DG(Y40):DC(X-40) DT(Y41):DA(X-41) DC(Y42):DG(X-42) DT(Y43):DA(X-43) DC(Y44):DG(X-44) DC(Y45):DG(X-45) DA(Y46):DT(X-46) DG(Y47):DC(X-47) DG(Y48):DC(X-48) DC(Y49):DG(X-49) DA(Y50):DT(X-50) DC(Y51):DG(X-51) DG(Y52):DC(X-52) DT(Y53):DA(X-53) DG(Y54):DC(X-54) DT(Y55):DA(X-55) DC(Y56):DG(X-56) DA(Y57):DT(X-57) DG(Y58):DC(X-58) DA(Y59):DT(X-59) DT(Y60):DA(X-60) DA(Y61):DT(X-61) DT(Y62):DA(X-62) DA(Y63):DT(X-63) DT(Y64):DA(X-64) DA(Y65):DT(X-65) DC(Y66):DG(X-66) DA(Y67):DT(X-67) DT(Y68):DA(X-68) DC(Y69):DG(X-69) DC(Y70):DG(X-70) DT(Y71):DA(X-71) DG(Y72):DC(X-72) DT(Y73):DA(X-73) DT(Y74):DA(X-74) DC(Y75):DG(X-75) DT(Y76):DA(X-76) DA(Y77):DT(X-77) DG(Y78):DC(X-78) DA(Y79):DT(X-79) DG(Y80):DC(X-80) DC(Y81):DG(X-81) DG(Y82):DC(X-82) DG(Y83):DC(X-83) DC(Y84):DG(X-84) DC(Y85):DG(X-85) DG(Y86):DC(X-86) DC(Y87):DG(X-87) DC(Y88):DG(X-88) chainS ( 3) HIS39 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirge >8kd7_S:Histone-fold; title=RPD3S IN COMPLEX WITH NUCLEOSOME WITH H3K36MLA MODIFICATION AND 167BP DNA organism=? DNA sequence DT(Y-72):DA(X72) DG(Y-71):DC(X71) DG(Y-70):DC(X70) DA(Y-69):DT(X69) DG(Y-68):DC(X68) DA(Y-67):DT(X67) DT(Y-65):DA(X65) DC(Y-64):DG(X64) DC(Y-63):DG(X63) DC(Y-62):DG(X62) DG(Y-61):DC(X61) DG(Y-60):DC(X60) DT(Y-59):DA(X59) DG(Y-58):DC(X58) DC(Y-57):DG(X57) DC(Y-56):DG(X56) DG(Y-55):DC(X55) DA(Y-54):DT(X54) DG(Y-53):DC(X53) DG(Y-52):DC(X52) DC(Y-51):DG(X51) DC(Y-50):DG(X50) DG(Y-49):DC(X49) DC(Y-48):DG(X48) DT(Y-47):DA(X47) DC(Y-46):DG(X46) DA(Y-44):DT(X44) DT(Y-43):DA(X43) DT(Y-42):DA(X42) DG(Y-41):DC(X41) DG(Y-40):DC(X40) DT(Y-39):DA(X39) DC(Y-38):DG(X38) DG(Y-37):DC(X37) DT(Y-36):DA(X36) DA(Y-35):DT(X35) DG(Y-34):DC(X34) DA(Y-33):DT(X33) DC(Y-32):DG(X32) DA(Y-31):DT(X31) DG(Y-30):DC(X30) DC(Y-29):DG(X29) DT(Y-28):DA(X28) DC(Y-27):DG(X27) DT(Y-26):DA(X26) DA(Y-25):DT(X25) DG(Y-24):DC(X24) DC(Y-23):DG(X23) DA(Y-22):DT(X22) DC(Y-21):DG(X21) DC(Y-20):DG(X20) DG(Y-19):DC(X19) DC(Y-18):DG(X18) DT(Y-17):DA(X17) DT(Y-16):DA(X16) DA(Y-15):DT(X15) DA(Y-14):DT(X14) DA(Y-13):DT(X13) DC(Y-12):DG(X12) DG(Y-11):DC(X11) DC(Y-10):DG(X10) DA(Y-9):DT(X9) DC(Y-8):DG(X8) DG(Y-7):DC(X7) DT(Y-6):DA(X6) DA(Y-5):DT(X5) DC(Y-4):DG(X4) DG(Y-3):DC(X3) DC(Y-2):DG(X2) DG(Y-1):DC(X1) DC(Y0):DG(X0) DT(Y1):DA(X-1) DG(Y2):DC(X-2) DT(Y3):DA(X-3) DC(Y4):DG(X-4) DC(Y5):DG(X-5) DC(Y6):DG(X-6) DC(Y7):DG(X-7) DC(Y8):DG(X-8) DG(Y9):DC(X-9) DC(Y10):DG(X-10) DG(Y11):DC(X-11) DT(Y12):DA(X-12) DT(Y13):DA(X-13) DT(Y14):DA(X-14) DT(Y15):DA(X-15) DA(Y16):DT(X-16) DA(Y17):DT(X-17) DC(Y18):DG(X-18) DC(Y19):DG(X-19) DG(Y20):DC(X-20) DC(Y21):DG(X-21) DC(Y22):DG(X-22) DA(Y23):DT(X-23) DA(Y24):DT(X-24) DG(Y25):DC(X-25) DG(Y26):DC(X-26) DG(Y27):DC(X-27) DG(Y28):DC(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DT(Y31):DA(X-31) DA(Y32):DT(X-32) DC(Y33):DG(X-33) DT(Y34):DA(X-34) DC(Y35):DG(X-35) DC(Y36):DG(X-36) DC(Y37):DG(X-37) DT(Y38):DA(X-38) DA(Y39):DT(X-39) DG(Y40):DC(X-40) DT(Y41):DA(X-41) DC(Y42):DG(X-42) DT(Y43):DA(X-43) DC(Y44):DG(X-44) DC(Y45):DG(X-45) DA(Y46):DT(X-46) DG(Y47):DC(X-47) DG(Y48):DC(X-48) DC(Y49):DG(X-49) DA(Y50):DT(X-50) DC(Y51):DG(X-51) DG(Y52):DC(X-52) DT(Y53):DA(X-53) DG(Y54):DC(X-54) DT(Y55):DA(X-55) DC(Y56):DG(X-56) DA(Y57):DT(X-57) DG(Y58):DC(X-58) DA(Y59):DT(X-59) DT(Y60):DA(X-60) DA(Y61):DT(X-61) DT(Y62):DA(X-62) DA(Y63):DT(X-63) DT(Y64):DA(X-64) DA(Y65):DT(X-65) DC(Y66):DG(X-66) DA(Y67):DT(X-67) DT(Y68):DA(X-68) DC(Y69):DG(X-69) DT(Y71):DA(X-71) DG(Y72):DC(X-72) DT(Y73):DA(X-73) DT(Y74):DA(X-74) DC(Y75):DG(X-75) DT(Y76):DA(X-76) DA(Y77):DT(X-77) DG(Y78):DC(X-78) DA(Y79):DT(X-79) chainS ( 3) HIS39 0 0 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirge >8kg6_34567KL: title=YEAST REPLISOME IN STATE I organism=? DNA sequence DC(J15):DT(I47) DA(J16):DT(I46) DC(J17):DG(I45) DA(J18):DT(I44) DC(J19):DG(I43) DA(J20):DT(I42) DC(J21):DG(I41) DT(J22):DA(I40) DC(J23):DG(I39) DT(J24):DA(I38) DC(J25):DG(I37) DC(J26):DG(I36) DA(J27):DT(I35) DA(J28):DT(I34) DT(J29):DA(I33) DT(J30):DA(I32) DC(J31):DG(I31) DT(J32):DA(I30) DC(J33):DG(I29) DT(J34):DA(I28) DA(J35):DT(I27) DA(J36):DT(I26) chain3 chain4 (270) ARG449 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (271) GLN450 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chain5 chain6 chain7 (301) PHE363 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (302) LYS364 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (304) LEU366 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (305) LYS367 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainK chainL ( 2) LYS47 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 ( 75) LYS120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence davfgdrvrrfqefldtftsyrdsvrsiqvynsnnaanstslnilphriiislddlrefdrsfwsgilvepayfippaekaltdladsmddvphpnasavssrhpwklsfkgsfgahalsprtltaqhlnklvsvegivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnkltteygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfkslgaggmnqsnsntligfktlilgntvyplharstgvaarqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattgrgssgvgltaavttdretgerrleagamvladrgvvcidefdkmtdvdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrthrylppgylegepvrerlnlslavgedteipklvtipflrkyvqyakervipqltqeainvivknytdlrnddntkkspitartletlirlatahakvrlsktvnkvdakvaanllrfallged/iwgtnvsiqecttnfrnflmsfkykfrkildereefinnttdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransRQrvlkslyktyvdvvhvkkvsitdqdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktfryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitrdvdtkqlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledkvlpvefltmyisyakehihpiiteaaktelvrayvgmrkmgdkritattrqlesmirlaeahakmklknvveledvqeavrlirsaikdyatdpktgkidmnlvqtgksviqrklqedlsreimnvlkdsmsfnelikqinehsqdrvessdiqealsrlqqedkvivlgegvrrsv/ndddnteiiksfknfilefrldsqfiyrdqlrnnilvknysltvnmehligynediykklsdepsdiiplfetaitqvakrisilsrnslptfqlilnsnanqiplrdldsehvskivrlsgiiistsvlssratylsimcrncrhttsitinnfnsivslprsclskncgpdpyiiihesskfidqqflklqeipelvpvgemprnltmtcdryltnkvipgtrvtivgiysiynsknsgvairtpyikilgiqsdvetssiwnsvtmFTeeeeeeflqlsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllgdpgtaksqllkfvekvspiavytsgkgssaagltasvqrdpmtrefyleggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanpiygryddlkspgdnidfqttilsrfdmifivkddhneerdisianhvinihtgnanamqnqqeengseisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinelesterssipitirqleaiiriteslaklelspiaqerhvdeairlfqastmdaasqdpslseirrfeqelkrrlpigwstsyqtlrrefaldkalyalekhetiqlrhqgqniyrsgv/vkkvddvtgekvreafeqfledfsvgevekvyraqiefmkiydlntiyidyqhlsmrengalamaiseqyyrflpflqkglrrvvrkyapelleqtervfqisffnlptvhrirdirsekigsllsisgtvtrtsevrpelykasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsrfldwqkvriqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpdvtqlglpgvkpssnsgvtglrslgvrDLtykisflachvisigrdqevflnslssdeinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsgkassaagltaavvrdedytieagalmladngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkieppfsaeqlrryikyartfkpiltkearsylvekykelrkddaqgfsrssyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsiirv/alpsiqlpvdynnlfneitdflvtfkqdkgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcraidnnmplptkeidykddvldvilnqrrlrnermlsdrelfppnltrryflyfkplsqncarryrkkaisskplsvrqikgdflgqlitvrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflpapytgFKaLKaglltetyleaqfvrqhksdveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrvgirgdinvclmgdpgvaksqllkaickisprgvyttgkgtaavmkdpvtdemileggalvladngiccidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskremkfsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyqe/fsltvlrariallataiggpppyklgddclaclkdlkrwfklvddqqkrwdvamavaeyriltddllpilidwenkcslaaklankayydkialnclqllvlmtwplivteqsssnqitlygelkkhqlvykktilsmesgkvlraairlaldvikidrlsrtprdnmvlklvlnffrnviaiepgeftintkksmpkkgitsidtlppnvsmddislntvissfhknkvfgflltltsslsdfiniplleimfyftkdvnqellfprtsagfelskllqkehqmrknvikhtsarhsrfGGlLSiqtpdktrltvsgsqalvdekialqklddskkwnkriikkeglpnsllnsqtgkaifftesngkhfkefinnfidsgfnillhsvtnyftteqdrmvtleqveyllffawfvkyqllrskidnsadikqvsealkevtfilvssllrsaydlknwtvthagmiafnellnlvsrtkaaqdiefivsrlfsderiqllsnlpkigskyslqfmkscielthsvlkvleqysvnfqkvqanymtepvietyinflerfreleddsikkvfsffhrvfvqakeqallfrfdliillremlspdgldrmsrsrkyvsqfsdyflarlkkrlkkspawfvgllfpplhnsevgfyqryge/rKrrpqvkltaekllsdkglpyvlknahkririsskknsydnlsniiqfyqlwahelfpkakfkdfmkicqtvgKtdpvlreyrvslfrdemgm >8kg6_L: title=YEAST REPLISOME IN STATE I organism=? DNA sequence DT(I26):DA(J36) DT(I27):DA(J35) DA(I28):DT(J34) DG(I29):DC(J33) DA(I30):DT(J32) DG(I31):DC(J31) DA(I32):DT(J30) DA(I33):DT(J29) DT(I34):DA(J28) DT(I35):DA(J27) DG(I36):DC(J26) DG(I37):DC(J25) DA(I38):DT(J24) DG(I39):DC(J23) DA(I40):DT(J22) DG(I41):DC(J21) DT(I42):DA(J20) DG(I43):DC(J19) DT(I44):DA(J18) DG(I45):DC(J17) DT(I46):DA(J16) DT(I47):DC(J15) chainL ( 2) LYS47 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 ( 75) LYS120 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rKrrpqvkltaekllsdkglpyvlknahkririsskknsydnlsniiqfyqlwahelfpkakfkdfmkicqtvgKtdpvlreyrvslfrdemgm >8kg8_34567: title=YEAST REPLISOME IN STATE II organism=? DNA sequence DG(I43):DC(J19) DT(I44):DA(J18) DG(I45):DC(J17) DT(I46):DA(J16) DT(I47):DC(J15) chain3 chain4 (270) ARG449 0 2 2 0 0 (271) GLN450 0 0 1 0 0 chain5 chain6 chain7 (301) PHE363 0 0 0 2 3 (302) LYS364 0 0 0 0 2 (304) LEU366 0 0 0 5 7 (305) LYS367 0 0 0 0 10 prot.sequence davfgdrvrrfqefldtftsyrdsvrsiqvynsnnaanstslnilphriiislddlrefdrsfwsgilvepayfippaekaltdladsmddvphpnasavssrhpwklsfkgsfgahalsprtltaqhlnklvsvegivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnkltteygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfkslgaggmnqsnsntligfktlilgntvyplharstgvaarqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattgrgssgvgltaavttdretgerrleagamvladrgvvcidefdkmtdvdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrthrylppgylegepvrerlnlslavgedteipklvtipflrkyvqyakervipqltqeainvivknytdlrnddntkkspitartletlirlatahakvrlsktvnkvdakvaanllrfallged/iwgtnvsiqecttnfrnflmsfkykfrkildereefinnttdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransRQrvlkslyktyvdvvhvkkvsitdqdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktfryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavgltayitrdvdtkqlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledkvlpvefltmyisyakehihpiiteaaktelvrayvgmrkmgdekritattrqlesmirlaeahakmklknvveledvqeavrlirsaikdyatdpktgkidmnlvqtgksviqrklqedlsreimnvlkdsmsfnelikqinehsqdrvessdiqealsrlqqedkvivlgegvrrsv/ndddnteiiksfknfilefrldsqfiyrdqlrnnilvknysltvnmehligynediykklsdepsdiiplfetaitqvakrisilsrnslptfqlilnsnanqiplrdldsehvskivrlsgiiistsvlssratylsimcrncrhttsitinnfnsivslprsclskncgpdpyiiihesskfidqqflklqeipelvpvgemprnltmtcdryltnkvipgtrvtivgiysiynsknsgvairtpyikilgiqsdvetssiwnsvtmFTeeeeeeflqlsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllgdpgtaksqllkfvekvspiavytsgkgssaagltasvqrdpmtrefyleggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanpiygryddlkspgdnidfqttilsrfdmifivkddhneerdisianhvinihtgnanamqnqqeengseisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinelesterssipitirqleaiiriteslaklelspiaqerhvdeairlfqastmdaasqdpslseirrfeqelkrrlpigwstsyqtlrrefaldkalyalekhetiqlrhqgqniyrsgv/vkkvddvtgekvreafeqfledfsvgevekvyraqiefmkiydlntiyidyqhlsmrengalamaiseqyyrflpflqkglrrvvrkyapelleqtervfqisffnlptvhrirdirsekigsllsisgtvtrtsevrpelykasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsrfldwqkvriqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpdvtqlglpgvkpssnsgvtglrslgvrDLtykisflachvisigrdqevflnslssdeinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsgkassaagltaavvrdedytieagalmladngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkieppfsaeqlrryikyartfkpiltkearsylvekykelrkddaqgfsrssyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsiirv/alpsiqlpvdynnlfneitdflvtfkqdkgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcraidnnmplptkeidykddvldvilnqrrlrnermlsdrelfppnltrryflyfkplsqncarryrkkaisskplsvrqikgdflgqlitvrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflpapytgFKaLKaglltetyleaqfvrqhksdveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrvgirgdinvclmgdpgvaksqllkaickisprgvyttgkgtaavmkdpvtdemileggalvladngiccidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskremkfsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyqe >8kg9_3457: title=YEAST REPLISOME IN STATE III organism=? DNA sequence DA(I40):DT(J22) DG(I41):DC(J21) DT(I42):DA(J20) DG(I43):DC(J19) DT(I44):DA(J18) DG(I45):DC(J17) DT(I46):DA(J16) DT(I47):DC(J15) chain3 chain4 (276) ARG449 0 0 0 0 0 2 8 0 (277) GLN450 0 0 0 0 5 1 0 0 chain5 chain7 (296) PHE363 0 0 0 0 0 0 28 10 (297) LYS364 0 0 0 0 0 0 3 0 (299) LEU366 0 0 0 0 0 0 1 2 (300) LYS367 0 0 0 0 0 0 0 22 prot.sequence davfgdrvrrfqefldtftsyrdsvrsiqvynsnnaanlnilphriiislddlrefdrsfwsgilvepayfippaekaltdladsmddvphpnasavssrhpwklsfkgsfgahalsprtltaqhlnklvsvegivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnkltteygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfkslgaggmnqsntligfktlilgntvyplharstgvaarqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattgrgssgvgltaavttdretgerrleagamvladrgvvcidefdkmtdvdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrthrylppgylegepvrerlnlslavgedadklvtipflrkyvqyakervipqltqeainvivknytdlrnddntkkspitartletlirlatahakvrlsktvnkvdakvaanllrfallge/seplriiwgtnvsiqecttnfrnflmsfkykfrkildereefinnttdeelyyikqlnemrelgtsnlnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkfykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvydelvdscragdrievtgtfrsipiransRQrvlkslyktyvdvvhvkkvdlakirevaaredlysllarsiapsiyeledvkkgillqlfggtnktfryrgdinillcgdpstsksqilqyvhkitprgvytsgltayitrtkqlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakagiittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrelakhltnlyledvlpvefltmyisyakehihpiiteaaktelvrayvgmrkmtattrqlesmirlaeahakmklknvveledvqeavrlirsaikdkidmnlvqtgksviqrklqedlsreimnvlkdqasdsmsfnelikqinehsqdrvessdiqealsrlqqedkvivlggvrrsv/ndddnteiiksfknfilefrldsqfiyrdqlrnnilvknysltvnmehligynediykklsdepsdiiplfetaitqvakrisilsralnslptfqlilnsnanqiplrdldsehvskivrlsgiiistsvlssratylsimcrncrhttsitinnfnsntvslprsclsncgpdpyiiihesskfidqqflklqeipelvpvgemprnltmtcdryltnkvipgtrvtivgiysiynskgvairtpyikilgiqsdvetssiwnsvtmfteeeeEEflqlsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllgdpgtaksqllkfvekvspiavytsgkgssaagltasvqrdpmtrefyleggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanpiygryddlkspgdnidfqttilsrfdmifivkddhneerdisianhvinihtgnanamqnqqeengseisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinelesterssipitirqleaiiriteslaklelspiaqerhvdeairlfqastmdaasqdptslseirrfeqelkrrlpigwstsyqtlrrefvdthrfsqlaldkalyalekheyrsgv/alpsiqlpvdynnlfneitdflvtfkqdtlsgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcraidnnmplptkeidykddvldvilnqrrlrnelfppnltrryflyfkplsqncarryrkkaisskplsvrqikgdflgqlitvrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflpapytgFKaLKaglltetyleaqfvrqhkkdveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrrgdinvclmgdpgvaksqllkaickisprgvyttgkgssgaavmkdpvtdemileggalvladngiccidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskrsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyq >8kg9_7:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=YEAST REPLISOME IN STATE III organism=? DNA sequence DC(J15):DT(I47) DA(J16):DT(I46) DC(J17):DG(I45) DA(J18):DT(I44) DC(J19):DG(I43) DA(J20):DT(I42) DC(J21):DG(I41) DT(J22):DA(I40) chain7 (296) PHE363 10 28 0 0 0 0 0 0 (297) LYS364 0 3 0 0 0 0 0 0 (299) LEU366 2 1 0 0 0 0 0 0 (300) LYS367 22 0 0 0 0 0 0 0 prot.sequence alpsiqlpvdynnlfneitdflvtfkqdtlsgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcraidnnmplptkeidykddvldvilnqrrlrnelfppnltrryflyfkplsqncarryrkkaisskplsvrqikgdflgqlitvrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflpapytgFKaLKaglltetyleaqfvrqhkkdveervmelitsgdvynrlaksiapeiygnldvkkalllllvggvdkrrgdinvclmgdpgvaksqllkaickisprgvyttgkgssgaavmkdpvtdemileggalvladngiccidefdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyvvqayirlrqdskrsfgqatprtllgiirlsqalaklrladmvdiddveealrlvrvskeslyq >8mht_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/DNA COMPLEX organism=Haemophilus haemolyticus DNA sequence DC(D422):DG(C413) DC(D423):DG(C412) DA(D424):DT(C411) DT(D425):DA(C410) DG(D426):DC(C409) DG(D428):DC(C407) DC(D429):DG(C406) DT(D430):DA(C405) DG(D431):DC(C404) DA(D432):DT(C403) DC(D433):DG(C402) chainA ( 86) ILE86 0 0 1 3 1 0 0 0 0 0 0 ( 87) SER87 0 0 0 0 6 7 0 0 0 0 0 (228) ARG228 0 0 0 1 0 0 0 0 0 0 0 (237) GLN237 0 0 0 0 29 22 0 0 0 0 0 (240) ARG240 0 0 0 9 9 0 0 0 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvRlgivgkggQgeRiystrgiaitlsaygggifaktggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy >8oej_ABDH:Nucleic_acid-binding_proteins; title=EXTENDED RPA-DNA NUCLEOPROTEIN FILAMENT organism=? DNA sequence DT(T1) DT(T2) DT(T3) DT(T4) DT(T5) DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T35) DT(T36) DT(T37) DT(T38) DT(T39) DT(T40) DT(T41) DT(T42) DT(T43) DT(T44) DT(T45) DT(T46) DT(T47) DT(T48) chainA (139) ARG211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 0 0 0 (143) TYR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (175) MET247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (177) ILE249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (192) THR264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (194) PHE266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 7 0 0 0 0 0 0 0 0 0 0 0 (252) ASP324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 (253) ARG325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (254) PHE326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 34 0 0 0 0 0 0 0 0 (255) LEU327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (260) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 chainB ( 25) PHE27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 74) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 ( 76) PHE78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 14 0 ( 77) ARG79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 0 0 (101) TRP103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 (106) GLN108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 (108) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 chainD (135) ARG211 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) TYR215 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (146) LYS222 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) MET247 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ILE249 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) THR264 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) PHE266 0 25 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ASP324 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (249) ARG325 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) PHE326 0 0 0 0 26 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) LEU327 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG332 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 25) PHE27 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) PHE78 0 0 0 0 0 0 0 0 0 0 0 42 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG79 0 0 0 0 0 0 0 0 0 0 15 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) TRP103 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) GLN108 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) LEU110 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence slmriselypgmdprevnvvgrvlkkyppreytrkdgsvgrvasliiyddsgrarvvlwdakvseyynkievgdvikvldaqvkeslsglpelhinfrariilnpddprvemitrkkikdieagdrfvevrgtiakvyRvltYdacpecKkkvdydeglgvwicpehgevqpikMtIldfglddgtgyirvTlFgddaeellgvspeeiaekikeleesglttkeaarklaedefyniigreivvrgnvieDRFLglilRasswedvdyrreierikeeleklgvm/krmpatrlyikdilegyfvksegdFepnylitkyarkvyrakivgtvvrepliaedetygkfqvddgtgviwvLgFRddtkfaklvrkgdlvqvigkiaeWrddkQiLvegvskvhpnmwilhryetlkekiehikkakialeiynqygitakskviaknkgieeellevidelygim/slmriselypgmdprevnvvgrvlkkyppreytrkdgsvgrvasliiyddsgrarvvlwdakvseyynkievgdvikvldaqvkeslsglpelhinfrariilnpddprtrkkikdieagdrfvevrgtiakvyRvltYdacpecKkkvdydeglgvwicpehgevqpikMtIldfglddgtgyirvTlFgddaeellgvspeeiaekikeleesglttkeaarklaedefyniigreivvrgnvieDRFLglilRasswedvdyrreierikeeleklgvm/krmpatrlyikdilegyfvksegdFepnylitkyarkvyrakivgtvvrepliaedetygkfqvddgtgviwvLgFRddtkfaklvrkgdlvqvigkiaeWrddkQiLvegvskvhpnmwilhryetlkekiehikkakialeiynqygitakskviaknkgieeellevidelygim >8oej_B:Nucleic_acid-binding_proteins; title=EXTENDED RPA-DNA NUCLEOPROTEIN FILAMENT organism=? DNA sequence DT(T1) DT(T2) DT(T3) DT(T4) DT(T5) DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T35) DT(T36) DT(T37) DT(T38) DT(T39) DT(T40) DT(T41) DT(T42) DT(T43) DT(T44) DT(T45) DT(T46) DT(T47) DT(T48) chainB ( 25) PHE27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 74) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 ( 76) PHE78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 14 0 ( 77) ARG79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 0 0 (101) TRP103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 (106) GLN108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 (108) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 prot.sequence krmpatrlyikdilegyfvksegdFepnylitkyarkvyrakivgtvvrepliaedetygkfqvddgtgviwvLgFRddtkfaklvrkgdlvqvigkiaeWrddkQiLvegvskvhpnmwilhryetlkekiehikkakialeiynqygitakskviaknkgieeellevidelygim >8oel_A:Nucleic_acid-binding_proteins; title=CONDENSED RPA-DNA NUCLEOPROTEIN FILAMENT organism=? DNA sequence DT(T1) DT(T2) DT(T3) DT(T4) DT(T5) DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T30) DT(T31) DT(T32) DT(T33) DT(T34) DT(T35) DT(T36) DT(T37) DT(T38) DT(T39) DT(T40) DT(T41) DT(T42) DT(T43) chainA (139) ARG211 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) TYR215 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS222 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) MET247 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ILE249 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) THR264 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) PHE266 0 25 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (252) ASP324 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) ARG325 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) PHE326 0 0 0 0 26 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) LEU327 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ARG332 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence slmriselypgmdprevnvvgrvlkkyppreytrkdgsvgrvasliiyddsgrarvvlwdakvseyynkievgdvikvldaqvkeslsglpelhinfrariilnpddprvemitrkkikdieagdrfvevrgtiakvyRvltYdacpecKkkvdydeglgvwicpehgevqpikMtIldfglddgtgyirvTlFgddaeellgvspeeiaekikeleesglttkeaarklaedefyniigreivvrgnvieDRFLglilRasswedvdyrreierikeeleklgvm >8oel_ABDH:Nucleic_acid-binding_proteins; title=CONDENSED RPA-DNA NUCLEOPROTEIN FILAMENT organism=? DNA sequence DT(T1) DT(T2) DT(T3) DT(T4) DT(T5) DT(T6) DT(T7) DT(T8) DT(T9) DT(T10) DT(T11) DT(T12) DT(T13) DT(T14) DT(T30) DT(T31) DT(T32) DT(T33) DT(T34) DT(T35) DT(T36) DT(T37) DT(T38) DT(T39) DT(T40) DT(T41) DT(T42) DT(T43) chainA (139) ARG211 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) TYR215 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS222 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (175) MET247 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (177) ILE249 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (192) THR264 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) PHE266 0 25 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (252) ASP324 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) ARG325 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) PHE326 0 0 0 0 26 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (255) LEU327 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ARG332 0 1 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 25) PHE27 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 76) PHE78 0 0 0 0 0 0 0 0 0 0 0 42 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 77) ARG79 0 0 0 0 0 0 0 0 0 0 15 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) TRP103 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) GLN108 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (108) LEU110 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 39) VAL100 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (139) ARG211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 0 0 0 (143) TYR215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (150) LYS222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (175) MET247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (177) ILE249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 (192) THR264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (194) PHE266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 7 0 0 0 0 0 0 0 0 0 0 0 (252) ASP324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 (253) ARG325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (254) PHE326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 34 0 0 0 0 0 0 0 0 (255) LEU327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 (260) ARG332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 10 1 0 0 0 0 0 0 0 0 0 0 chainH ( 25) PHE27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 74) LEU76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 ( 76) PHE78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42 14 0 ( 77) ARG79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 0 0 (101) TRP103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 (106) GLN108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 (108) LEU110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 prot.sequence slmriselypgmdprevnvvgrvlkkyppreytrkdgsvgrvasliiyddsgrarvvlwdakvseyynkievgdvikvldaqvkeslsglpelhinfrariilnpddprvemitrkkikdieagdrfvevrgtiakvyRvltYdacpecKkkvdydeglgvwicpehgevqpikMtIldfglddgtgyirvTlFgddaeellgvspeeiaekikeleesglttkeaarklaedefyniigreivvrgnvieDRFLglilRasswedvdyrreierikeeleklgvm/krmpatrlyikdilegyfvksegdFepnylitkyarkvyrakivgtvvrepliaedetygkfqvddgtgviwvLgFRddtkfaklvrkgdlvqvigkiaeWrddkQiLvegvskvhpnmwilhryetlkekiehikkakialeiynqygitakskviaknkgieeellevidelygim/slmriselypgmdprevnvvgrvlkkyppreytrkdgsVgrvasliiyddsgrarvvlwdakvseyynkievgdvikvldaqvkeslsglpelhinfrariilnpddprvemitrkkikdieagdrfvevrgtiakvyRvltYdacpecKkkvdydeglgvwicpehgevqpikMtIldfglddgtgyirvTlFgddaeellgvspeeiaekikeleesglttkeaarklaedefyniigreivvrgnvieDRFLglilRasswedvdyrreierikeeleklgvm/krmpatrlyikdilegyfvksegdFepnylitkyarkvyrakivgtvvrepliaedetygkfqvddgtgviwvLgFRddtkfaklvrkgdlvqvigkiaeWrddkQiLvegvskvhpnmwilhryetlkekiehikkakialeiynqygitakskviaknkgieeellevidelygim >8oet_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=SFX STRUCTURE OF THE CLASS II PHOTOLYASE COMPLEXED WITH A THYMINE DIMER organism=? DNA sequence DT(C2):DG(D13) DC(C3):DC(D12) DG(C4):DC(D11) DG(C5):DG(D10) DC(C6):DA(D9) TTD(C7):DA(D8) DC(C9):DG(D7) DG(C10):DC(D6) DC(C11):DG(D5) DG(C12):DC(D4) DC(C13):DG(D3) DA(C14):DT(D2) chainA (159) HIS161 0 0 0 1 2 0 0 0 0 0 0 0 (245) ARG256 0 0 0 0 0 6 0 0 0 0 0 0 (246) ASN257 0 0 0 0 0 4 0 0 0 0 0 0 (290) GLU301 0 0 0 0 0 11 0 0 0 0 0 0 (294) TRP305 0 0 0 0 0 35 0 0 0 0 0 0 (368) MET379 0 0 0 0 0 20 0 0 0 0 0 0 (410) TRP421 0 0 0 0 0 17 0 0 0 0 0 0 (418) ARG429 0 0 0 14 54 6 0 0 0 0 0 0 (420) TRP431 0 0 0 0 0 6 19 0 0 0 0 0 (430) ARG441 0 0 0 0 0 5 3 0 0 0 0 0 (439) ARG450 0 0 0 0 0 0 0 0 12 11 6 1 prot.sequence mnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheYaaHtfrpklyallpefleefpelepnsvtpetlsdvletgvkallperallknkdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgymrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekysaldkla >8oeu_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURE OF THE MAMMALIAN POL II-SPT6 COMPLEX (COMPOSITE STRUCTURE, STRUCTURE 4) organism=? DNA sequence DC(T5):DG(N44) DC(T6):DG(N43) DA(T7):DT(N42) DG(T8):DC(N41) DC(T9):DG(N40) DT(T10):DA(N39) DC(T11):DG(N38) DC(T12):DG(N37) DC(T13):DG(N36) DT(T14):DA(N35) DG(T15):DC(N34) DC(T16):DG(N33) DT(T17):DA(N32) DG(T18):DC(N31) DG(T19):DC(N30) DC(T20):DG(N29) DT(T21):DA(N28) DC(T22):DG(N27) DC(T23):DG(N26) DG(T24):DG(N13) DA(T25):DG(N12) DG(T26):DC(N11) DT(T27):DG(N10) DG(T28):DA(N9) DG(T29):DG(N8) DG(T30):DA(N7) chainA (326) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 (423) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (424) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 (816) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 (817) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (1340) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicegggcgryqprirrsglelyaewkhvqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddklvlririmnkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme >8oeu_ABE: title=STRUCTURE OF THE MAMMALIAN POL II-SPT6 COMPLEX (COMPOSITE STRUCTURE, STRUCTURE 4) organism=? DNA sequence DA(N7):DG(T30) DG(N8):DG(T29) DA(N9):DG(T28) DG(N10):DT(T27) DC(N11):DG(T26) DG(N12):DA(T25) DG(N13):DG(T24) DG(N26):DC(T23) DG(N27):DC(T22) DA(N28):DT(T21) DG(N29):DC(T20) DC(N30):DG(T19) DC(N31):DG(T18) DA(N32):DT(T17) DG(N33):DC(T16) DC(N34):DG(T15) DA(N35):DT(T14) DG(N36):DC(T13) DG(N37):DC(T12) DG(N38):DC(T11) DA(N39):DT(T10) DG(N40):DC(T9) DC(N41):DG(T8) DT(N42):DA(T7) DG(N43):DC(T6) DG(N44):DC(T5) chainA (326) ARG364 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) GLN461 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) PRO462 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (816) THR854 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (817) ALA855 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1340) ARG1416 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicegggcgryqprirrsglelyaewkhvqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddklvlririmnkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/deitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqappryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlargaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcEtkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgDQkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkLDddgliapgvrvsgddviigktvtlprytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8oev_ABE: title=STRUCTURE OF THE MAMMALIAN POL II-SPT6-ELONGIN COMPLEX, LACKING ELOA LATCH (COMPOSITE STRUCTURE, STRUCTURE 3) organism=? DNA sequence DA(N7):DG(T28) DG(N8):DT(T27) DG(N10):DG(T26) DG(N12):DA(T25) DG(N13):DG(T24) DG(N26):DC(T23) DG(N27):DC(T22) DA(N28):DT(T21) DG(N29):DC(T20) DC(N30):DG(T19) DC(N31):DG(T18) DA(N32):DT(T17) DG(N33):DC(T16) DC(N34):DG(T15) DA(N35):DT(T14) DG(N36):DC(T13) DG(N37):DC(T12) DG(N38):DC(T11) DA(N39):DT(T10) DG(N40):DC(T9) DT(N42):DG(T8) DG(N43):DC(T6) DG(N44):DC(T5) chainA (326) ARG364 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) GLN461 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) PRO462 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (816) THR854 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (817) ALA855 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1340) ARG1416 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicegggcgryqprirrsglelyaewkhvqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddklvlririmnkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/deitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqappryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlargaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcEtkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgDQkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkLDddgliapgvrvsgddviigktvtlprytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8oew_ABE: title=STRUCTURE OF THE MAMMALIAN POL II-ELONGIN COMPLEX, LACKING THE ELOA LATCH (COMPOSITE STRUCTURE, STRUCTURE 2) organism=? DNA sequence DA(N7):DG(T28) DG(N8):DT(T27) DG(N10):DG(T26) DG(N12):DA(T25) DG(N13):DG(T24) DG(N26):DC(T23) DG(N27):DC(T22) DA(N28):DT(T21) DG(N29):DC(T20) DC(N30):DG(T19) DC(N31):DG(T18) DA(N32):DT(T17) DG(N33):DC(T16) DC(N34):DG(T15) DA(N35):DT(T14) DG(N36):DC(T13) DG(N37):DC(T12) DG(N38):DC(T11) DA(N39):DT(T10) DG(N40):DC(T9) DT(N42):DG(T8) DG(N43):DC(T6) DG(N44):DC(T5) chainA (326) ARG364 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (423) GLN461 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (424) PRO462 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (816) THR854 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (817) ALA855 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1340) ARG1416 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainE prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicegggcgryqprirrsglelyaewkhvqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddklvlririmnkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/deitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqappryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlargaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcEtkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgDQkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkLDddgliapgvrvsgddviigktvtlprytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8of0_ABE: title=STRUCTURE OF THE MAMMALIAN POL II-SPT6-ELONGIN COMPLEX, STRUCTURE 1 organism=? DNA sequence DC(T6):DG(N43) DA(T7):DT(N42) DG(T8):DC(N41) DC(T9):DG(N40) DT(T10):DA(N39) DC(T11):DG(N38) DC(T12):DG(N37) DC(T13):DG(N36) DT(T14):DA(N35) DG(T15):DC(N34) DC(T16):DG(N33) DT(T17):DA(N32) DG(T18):DC(N31) DG(T19):DC(N30) DC(T20):DG(N29) DT(T21):DA(N28) DC(T22):DG(N27) DC(T23):DG(N26) DG(T24):DG(N13) DA(T25):DG(N12) DG(T26):DC(N11) DT(T27):DG(N10) DG(T28):DG(N8) DG(T29):DA(N7) chainA (326) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (423) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (424) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 (816) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 (817) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (1340) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 chainB (460) ASP569 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 0 0 0 chainE prot.sequence dsacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicegggcgryqprirrsglelyaewkhvqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddklvlririmnkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygme/deitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqappryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlargaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrDgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlprytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8of4_E:Histone-fold; title=NUCLEOSOME BOUND HUMAN SIRT6 (COMPOSITE) organism=? DNA sequence DA(I-72):DT(J72) DT(I-71):DA(J71) DC(I-70):DG(J70) DA(I-69):DT(J69) DG(I-68):DC(J68) DA(I-67):DT(J67) DA(I-66):DT(J66) DT(I-65):DA(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DG(I-61):DC(J61) DG(I-60):DC(J60) DT(I-59):DA(J59) DG(I-58):DC(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DG(I-55):DC(J55) DA(I-54):DT(J54) DG(I-53):DC(J53) DG(I-52):DC(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DT(I-47):DA(J47) DC(I-46):DG(J46) DA(I-45):DT(J45) DA(I-44):DT(J44) DT(I-43):DA(J43) DT(I-42):DA(J42) DG(I-41):DC(J41) DG(I-40):DC(J40) DT(I-39):DA(J39) DC(I-38):DG(J38) DG(I-37):DC(J37) DT(I-36):DA(J36) DA(I-35):DT(J35) DG(I-34):DC(J34) DA(I-33):DT(J33) DC(I-32):DG(J32) DA(I-31):DT(J31) DG(I-30):DC(J30) DC(I-29):DG(J29) DT(I-28):DA(J28) DC(I-27):DG(J27) DT(I-26):DA(J26) DA(I-25):DT(J25) DG(I-24):DC(J24) DC(I-23):DG(J23) DA(I-22):DT(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DC(I-18):DG(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DC(I-12):DG(J12) DG(I-11):DC(J11) DC(I-10):DG(J10) DA(I-9):DT(J9) DC(I-8):DG(J8) DG(I-7):DC(J7) DT(I-6):DA(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DG(I-3):DC(J3) DC(I-2):DG(J2) DG(I-1):DC(J1) DC(I0):DG(J0) DT(I1):DA(J-1) DG(I2):DC(J-2) DT(I3):DA(J-3) DC(I4):DG(J-4) DC(I5):DG(J-5) DC(I6):DG(J-6) DC(I7):DG(J-7) DC(I8):DG(J-8) DG(I9):DC(J-9) DC(I10):DG(J-10) DG(I11):DC(J-11) DT(I12):DA(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DC(I18):DG(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DA(I23):DT(J-23) DA(I24):DT(J-24) DG(I25):DC(J-25) DG(I26):DC(J-26) DG(I27):DC(J-27) DG(I28):DC(J-28) DA(I29):DT(J-29) DT(I30):DA(J-30) DT(I31):DA(J-31) DA(I32):DT(J-32) DC(I33):DG(J-33) DT(I34):DA(J-34) DC(I35):DG(J-35) DC(I36):DG(J-36) DC(I37):DG(J-37) DT(I38):DA(J-38) DA(I39):DT(J-39) DG(I40):DC(J-40) DT(I41):DA(J-41) DC(I42):DG(J-42) DT(I43):DA(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DA(I46):DT(J-46) DG(I47):DC(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DA(I50):DT(J-50) DC(I51):DG(J-51) DG(I52):DC(J-52) DT(I53):DA(J-53) DG(I54):DC(J-54) DT(I55):DA(J-55) DC(I56):DG(J-56) DA(I57):DT(J-57) DG(I58):DC(J-58) DA(I59):DT(J-59) DT(I60):DA(J-60) DA(I61):DT(J-61) DT(I62):DA(J-62) DA(I63):DT(J-63) DT(I64):DA(J-64) DA(I65):DT(J-65) DC(I66):DG(J-66) DA(I67):DT(J-67) DT(I68):DA(J-68) DC(I69):DG(J-69) DG(I70):DC(J-70) DA(I71):DT(J-71) DT(I72):DA(J-72) chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirgera >8off_a:Histone-fold;Ankyrin_repeat;Ubiquitin-like; title=STRUCTURE OF BARD1 ARD-BRCTS IN COMPLEX WITH H2AKC15UB NUCLEOSOMES (MAP1) organism=? DNA sequence DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DG(J6):DC(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DT(J55):DA(I-55) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DA(J59):DT(I-59) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) chaina prot.sequence phryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgerkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsskaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtAmdvvyalkrqgrtlygfvkrnhrgetllhiasikgdlpsveyllqngsdpnvkdhagwtplheacnhghlkvvelllqhkalvnstgyqndsplhdaaknghmdivklllsygasrnavnifglrpvdyadgenmkslmqifvktltgktitlevepsdtienvkakiqdkEgippdqQrlifagkqledgrtlsdyniqkestlhlvlrlr >8olx_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTSBETA BOUND TO (CAG)2 DNA (CANONICAL FORM) organism=? DNA sequence DT(C19):DG(D43) DT(C20):DG(D42) G(C21):DC(D41) C(C22):DT(D40) A(C23):DC(D39) C(C24):DG(D38) C(C25):DA(D35) G(C26):DC(D34) A(C27):DG(D33) G(C28):DA(D32) DT(C30):DC(D31) DG(C31):DC(D30) DA(C32):DT(D29) DT(C33):DA(D28) DC(C34):DG(D27) DC(C35):DG(D26) DT(C36):DA(D25) DC(C37):DG(D24) DG(C38):DC(D23) DA(C39):DT(D22) chainA ( 24) ARG39 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 26) ASP41 0 0 0 0 0 0 0 15 2 0 0 0 0 0 0 0 0 0 0 0 ( 27) PHE42 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) THR44 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 31) HIS46 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) LYS65 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 52) MET67 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) SER77 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) VAL79 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) SER81 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (511) ASN547 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 chainB ( 29) TYR254 0 0 0 0 0 0 0 0 0 0 30 9 0 0 0 0 0 0 0 0 ( 30) LYS255 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (503) LYS757 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence evgfvrffqgmpekptttvrlfdRgDFyTaHgedallaarevfktqgviKyMgpagaknlqSvVlSkmnfesfvkdlllvrqyrvevyknrakaskendwylaykaspgnlsqfedilsigvvgvkmsavdgqrqvgvgyvdsiqrklglcefpdndqfsnlealliqigpkecvlpggetagdmgklrqiiqrggiliterkkadfstkdiyqdlnrllkgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfsqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssfgyyfrvtckeekvlrnnknfstvdiqkNgvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqdeiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleelereqgekiiqeflskvkqmpftemseenitiklkqlkaeviaknnsfvneiisri/ksiytplelqyiemkqqhkdavlcvecgYKyrffgedaeiaarelniychldhnfmtasipthrlfvhvrrlvakgykvgvvkqtetaalkaigdnrsslfsrkltalytkstligedvnptsyllcisenkenvrdkkkgnifigivgvqpatgevvfdsfqdsasrseletrmsslqpvelllpsalseqtealihratsvsvqddrirvermdniyfeyshafqavtefyaisgivnlekpvicslaaiikylkefnlekmlskpenfkqlsskmefmtingttlrnleilqnqtdmktkgsllwvldhtktsfgrrklkkwvtqpllklreinarldavsevlhsessvfgqienhlrklpdierglcsiyhkkcstqefflivktlyhlksefqaiipavnshiqsdllrtvileipellspvehylkilneqaakvgdktelfkdlsdfplikkrkdeiqgvideirmhlqeirkilknpsaqyvtvsgqefmieiKnsavsciptdwvkvgstkavsrfhspfivenyrhlnqlreqlvldcsaewldflekfsehyhslckavhhlatvdcifslakvakqgdycrptvqeerkivikngrhpvidvllqyvpnntdlsedservmiitgpnmggkssyikqvalitimaqigsyvpaeeatigivdgiftrmstfmeeltdtaeiirkatsqslvildelgrgtsthdgiaiayatleyfirdvksltlfvthyppvceleknyshqvgnyhmgflyqitrgiaarsyglnvakladvpgeilkkaahkskeleglintkrkrlkyfaklwtmhnaqdlqkwteefn >8olx_B:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTSBETA BOUND TO (CAG)2 DNA (CANONICAL FORM) organism=? DNA sequence DT(C19):DG(D43) DT(C20):DG(D42) G(C21):DC(D41) C(C22):DT(D40) A(C23):DC(D39) C(C24):DG(D38) C(C25):DA(D35) G(C26):DC(D34) A(C27):DG(D33) G(C28):DA(D32) DT(C30):DC(D31) DG(C31):DC(D30) DA(C32):DT(D29) DT(C33):DA(D28) DC(C34):DG(D27) DC(C35):DG(D26) DT(C36):DA(D25) DC(C37):DG(D24) DG(C38):DC(D23) DA(C39):DT(D22) chainB ( 29) TYR254 0 0 0 0 0 0 0 0 0 0 30 9 0 0 0 0 0 0 0 0 ( 30) LYS255 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 (503) LYS757 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ksiytplelqyiemkqqhkdavlcvecgYKyrffgedaeiaarelniychldhnfmtasipthrlfvhvrrlvakgykvgvvkqtetaalkaigdnrsslfsrkltalytkstligedvnptsyllcisenkenvrdkkkgnifigivgvqpatgevvfdsfqdsasrseletrmsslqpvelllpsalseqtealihratsvsvqddrirvermdniyfeyshafqavtefyaisgivnlekpvicslaaiikylkefnlekmlskpenfkqlsskmefmtingttlrnleilqnqtdmktkgsllwvldhtktsfgrrklkkwvtqpllklreinarldavsevlhsessvfgqienhlrklpdierglcsiyhkkcstqefflivktlyhlksefqaiipavnshiqsdllrtvileipellspvehylkilneqaakvgdktelfkdlsdfplikkrkdeiqgvideirmhlqeirkilknpsaqyvtvsgqefmieiKnsavsciptdwvkvgstkavsrfhspfivenyrhlnqlreqlvldcsaewldflekfsehyhslckavhhlatvdcifslakvakqgdycrptvqeerkivikngrhpvidvllqyvpnntdlsedservmiitgpnmggkssyikqvalitimaqigsyvpaeeatigivdgiftrmstfmeeltdtaeiirkatsqslvildelgrgtsthdgiaiayatleyfirdvksltlfvthyppvceleknyshqvgnyhmgflyqitrgiaarsyglnvakladvpgeilkkaahkskeleglintkrkrlkyfaklwtmhnaqdlqkwteefn >8om9_B:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTSBETA BOUND TO (CAG)2 DNA (OPEN FORM) organism=? DNA sequence DC(D14):DG(C53) DT(D15):DA(C52) DG(D16):DC(C51) DA(D17):DT(C50) DA(D18):DT(C49) DT(D19):DA(C48) DT(D20):DA(C47) DG(D21):DC(C46) DC(D22):DG(C45) DA(D23):DT(C44) DC(D24):DG(C43) DC(D25):DG(C42) DG(D26):DC(C41) DA(D27):DT(C40) DG(D28):DC(C39) DC(D29):DG(C38) DT(D30):DA(C37) DG(D31):DG(C36) DA(D32):DA(C35) DT(D33):DT(C29) chainB ( 26) TYR254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 ( 60) HIS288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (474) LYS757 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 (493) ALA776 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 prot.sequence ytplelqyiemkqqhkdavlcvecgYkyrffgedaeiaarelniychldhnfmtasiptHrlfvhvrrlvakgykvgvvkqrkltalytkstligedvnpltsyllcisenkenvrdkkkgnifigivgvqpatgevvfdsfqdsasrseletrmsslqpvelllpsalseqtealihratsvrirvermdniyfeyshafqavtefyivnlekpvicslaaiikylkefnlekmlskpenfkqlsskmefmtingttlrnleilqnqtdmktkgsllwvldhtktsfgrrklkkwvtqpllklreinarldavsevlhsessvfgqienhlrklpdierglcsiyhkkcstqefflivktlyhlksefqaiipavnshiqsdllrtvileipellspvehylkilneqaakvgdktelfkdlsdfplikkrkdeiqgvideirmhlqeirkilknpsaqyvtvsgqefmieiKnsavsciptdwvkvgstkAvsrfhspfivenyrhlnqlreqlvldcsaewldflekfsehyhslckavhhlatvdcifslakvakqgdycrptvqeerkivikngrhpvidvllgeqdqyvpnntdlsedservmiitgpnmggkssyikqvalitimaqigsyvpaeeatigivdgiftrmstfmeeltdtaeiirkatsqslvildelgrgtsthdgiaiayatleyfirdvksltlfvthyppvceleknyshqvgnyhmgflvsedfvtflyqitrgiaarsyglnvakladvpgeilkkaahkskeleglintkrkrlkyfaklwtmhnaqdlqkwt >8oma_A:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTSBETA BOUND TO 61BP HOMODUPLEX DNA organism=? DNA sequence DC(C1):DG(D17) DT(C2):DA(D16) DG(C3):DC(D15) DA(C4):DT(D14) DA(C5):DT(D13) DG(C6):DC(D12) DC(C7):DG(D11) DT(C8):DA(D10) DT(C9):DA(D9) DA(C10):DT(D8) DG(C11):DC(D7) DC(C12):DG(D6) DT(C13):DA(D5) DT(C14):DA(D4) DA(C15):DT(D3) DG(C16):DC(D2) DG(C17):DC(D1) chainA ( 55) GLU205 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LYS229 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) GLN518 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (374) CYS527 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (375) LYS528 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 (392) GLN545 0 0 0 0 0 0 0 0 4 6 4 0 0 0 0 0 0 (393) LYS546 0 0 0 0 0 0 0 0 0 0 5 11 9 2 0 0 0 prot.sequence sigvvgvkmsqrqvgvgyvdsiqrklglcefpdndqfsnlealliqkecvlpggEtagdmgklrqiiqrggiliterkKadfstkdiyqdlnrllkgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfqgdttgsqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssaQfgyyfrvtCKeekvlrnnknfstvdiQKngvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqdeiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvgagdsqlkgvstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleefqyeqgekiiqeflskvkqmpftemseenitiklkqlkaeviaknnsfvneiisrikvtt >8oma_AB:DNA_repair_protein_MutS,_domain_III;P-loop_containing_nucleoside_triphosphate_hydrolases; title=MUTSBETA BOUND TO 61BP HOMODUPLEX DNA organism=? DNA sequence DC(C1):DG(D17) DT(C2):DA(D16) DG(C3):DC(D15) DA(C4):DT(D14) DA(C5):DT(D13) DG(C6):DC(D12) DC(C7):DG(D11) DT(C8):DA(D10) DT(C9):DA(D9) DA(C10):DT(D8) DG(C11):DC(D7) DC(C12):DG(D6) DT(C13):DA(D5) DT(C14):DA(D4) DA(C15):DT(D3) DG(C16):DC(D2) DG(C17):DC(D1) chainA ( 55) GLU205 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) LYS229 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (365) GLN518 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (374) CYS527 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (375) LYS528 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 (392) GLN545 0 0 0 0 0 0 0 0 4 6 4 0 0 0 0 0 0 (393) LYS546 0 0 0 0 0 0 0 0 0 0 5 11 9 2 0 0 0 chainB ( 88) ASP620 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 91) ARG623 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sigvvgvkmsqrqvgvgyvdsiqrklglcefpdndqfsnlealliqkecvlpggEtagdmgklrqiiqrggiliterkKadfstkdiyqdlnrllkgkkgeqmnsavlpemenqvavsslsavikflellsddsnfgqfelttfdfsqymkldiaavralnlfqgdttgsqslaallnkcktpqgqrlvnqwikqplmdknrieerlnlveafvedaelrqtlqedllrrfpdlnrlakkfqrqaanlqdcyrlyqginqlpnviqalekhegkhqklllavfvtpltdlrsdfskfqemiettldmdqvenheflvkpsfdpnlselreimndlekkmqstlisaardlgldpgkqikldssaQfgyyfrvtCKeekvlrnnknfstvdiQKngvkftnskltslneeytknkteyeeaqdaivkeivnissgyvepmqtlndvlaqldavvsfahvsngapvpyvrpailekgqgriilkasrhacvevqdeiafipndvyfekdkqmfhiitgpnmggkstyirqtgvivlmaqigcfvpcesaevsivdcilarvgagdsqlkgvstfmaemletasilrsatkdsliiidelgrgtstydgfglawaiseyiatkigafcmfathfheltalanqiptvnnlhvtaltteetltmlyqvkkgvcdqsfgihvaelanfpkhviecakqkaleleefqyeqgekiiqeflskvkqmpftemseenitiklkqlkaeviaknnsfvneiisrikvtt/mefmtingttlrnleilqnqtdmktkgsllwvldhtktsfgrrklkkwvtqpllklreinarldavsevlhsssvfgqienhlrklpDieRglcsiyhkkcstqefflivktlyhlksefqaiipavnshiqsdllrtvileipellspvehylkilneqaakvgdktelfkdlsdfplikkrkdeiqgvideirmhlqeirkilknpsaqyvtvsgqefmieiknsavsciptdwvkvgstkavsrfhspfivenyrhlnqlreqlvldcsaewldflekfsehyhslckavhhlatvdcifslakvakqgdycrptvqeerkivikngrhpvidvllgeqdqyvpnntdlsedservmiitgpnmggkssyikqvalitimaqigsyvpaeeatigivdgiftrmgaadniykgrstfmeeltdtaeiirkatsqslvildelgrgtsthdgiaiayatleyfirdvksltlfvthyppvceleknyshqvgnyhmgflvsdfvtflyqitrgiaarsyglnvakladvpgeilkkaahkskeleglintkrkrlkyfaklwtmhnaqdlqkwte >8oo6_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=POL I BOUND TO EXTENDED AND DISPLACED DNA SECTION - CLOSED CONFORMATION organism=? DNA sequence DG(T19):DC(P18) DA(T20):DT(P17) DC(T21):DG(P16) DT(T22):DA(P15) DG(T23):DC(P14) DG(T24):DC(P13) DG(T25):DC(P12) DA(T26):DT(P11) DA(T27):DT(P10) DA(T28):DT(P9) DA(T29):DT(P8) DC(T30):DG(P7) DC(T31):DG(P6) DC(T32):DG(P5) DT(T33):DA(P4) DG(T34):DC(P3) DG(T35):DC(P2) DC(T36):DG(P1) chainA (311) LYS635 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 (354) ASN678 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (434) LYS758 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (435) ALA759 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (438) PHE762 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) TYR766 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) MET768 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (525) GLN849 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gphdnyvtildeetlkawiaklekapvfafdtetdsldnisanlvglsfaiepgvaayipvahdyldapdqisreralellkplledekalkvgqnlkydrgilanygielrgiafdtmlesyilnsvagrhdmdslaerwlkhktitfeeiagkgknqltfnqialeeagryaaedadvtlqlhlkmwpdlqkhkgplnvfeniemplvpvlsrierngvkidpkvlhnhseeltlrlaelekkaheiageefnlsstkqlqtilfekqgikplkktpggapstseevleelaldyplpkvileyrglaKlkstytdklplminpktgrvhtsyhqavtatgrlsstdpnlqNipvrneegrrirqafiapedyvivsadysqielrimahlsrdkglltafaegkdihrataaevfglpletvtseqrrsaKAinFgliYgMsafglarqlniprkeaqkymdlyferypgvleymertraqakeqgyvetldgrrlylpdikssngarraaaeraainapmQgtaadiikramiavdawlqaeqprvrmimqvhdelvfevhkddvdavakqihqlmenctrldvpllvevgsgenwdqah >8oo7_GJMNOPQR: title=CRYOEM STRUCTURE INO80CORE HEXASOME COMPLEX COMPOSITE MODEL STATE1 organism=? DNA sequence DC(L-40):DG(K40) DT(L-39):DA(K39) DA(L-38):DT(K38) DG(L-37):DC(K37) DG(L-36):DC(K36) DG(L-35):DC(K35) DA(L-34):DT(K34) DG(L-33):DC(K33) DT(L-32):DA(K32) DA(L-31):DT(K31) DA(L-30):DT(K30) DT(L-29):DA(K29) DC(L-28):DG(K28) DC(L-27):DG(K27) DC(L-26):DG(K26) DC(L-25):DG(K25) DT(L-24):DA(K24) DT(L-23):DA(K23) DG(L-22):DC(K22) DG(L-21):DC(K21) DC(L-20):DG(K20) DG(L-19):DC(K19) DG(L-18):DC(K18) DT(L-17):DA(K17) DT(L-16):DA(K16) DA(L-15):DT(K15) DA(L-14):DT(K14) DA(L-13):DT(K13) DA(L-12):DT(K12) DC(L-11):DG(K11) DG(L-10):DC(K10) DC(L-9):DG(K9) DG(L-8):DC(K8) DG(L-7):DC(K7) DG(L-6):DC(K6) DG(L-5):DC(K5) DA(L-3):DC(K4) DC(L-2):DT(K3) DA(L-1):DT(K1) DG(L0):DC(K0) DC(L1):DG(K-1) DG(L2):DC(K-2) DC(L3):DG(K-3) DG(L4):DC(K-4) DT(L5):DA(K-5) DA(L6):DT(K-6) DC(L7):DG(K-7) DG(L8):DC(K-8) DT(L9):DA(K-9) DG(L10):DC(K-10) DC(L11):DG(K-11) DG(L12):DC(K-12) DT(L13):DA(K-13) DT(L14):DA(K-14) DT(L15):DA(K-15) DA(L16):DT(K-16) DA(L17):DT(K-17) DG(L18):DC(K-18) DC(L19):DG(K-19) DG(L20):DC(K-20) DG(L21):DC(K-21) DT(L22):DA(K-22) DG(L23):DC(K-23) DC(L24):DG(K-24) DT(L25):DA(K-25) DA(L26):DT(K-26) DG(L27):DC(K-27) DA(L28):DT(K-28) DG(L29):DC(K-29) DC(L30):DG(K-30) DT(L31):DA(K-31) DT(L32):DC(K-33) DC(L34):DG(K-34) DT(L35):DA(K-35) DA(L36):DT(K-36) DC(L37):DG(K-37) DG(L38):DC(K-38) DA(L39):DT(K-39) DC(L40):DG(K-40) DC(L41):DG(K-41) DA(L42):DT(K-42) DA(L43):DT(K-43) DT(L45):DA(K-44) DG(L46):DC(K-46) DA(L47):DT(K-47) DG(L48):DC(K-48) DC(L49):DG(K-49) DG(L50):DC(K-50) DG(L51):DC(K-51) DC(L52):DG(K-52) DC(L53):DG(K-53) DT(L54):DA(K-54) DC(L55):DG(K-55) DG(L56):DC(K-56) DG(L57):DC(K-57) DC(L58):DG(K-58) DA(L59):DT(K-59) DC(L60):DG(K-60) DC(L61):DG(K-61) DG(L62):DC(K-62) DG(L63):DC(K-63) DG(L64):DC(K-64) DA(L65):DT(K-65) DT(L66):DA(K-66) DT(L67):DA(K-67) DC(L68):DG(K-68) DT(L69):DA(K-69) DC(L70):DG(K-70) DC(L71):DG(K-71) DA(L72):DT(K-72) chainG (256) MET1258 0 0 0 0 0 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 76) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 93) ARG112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 5) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN chainO ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 1) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR prot.sequence qpkllncqlkeyqlkglnwlvnlyeqgingilademglgktvqsisvmaylaerydiwgpflvvapastlhnwqqevskfvpdfkvlpywgtaadrkvlrkfwdrkhttykkdspfhvmitsyqlvvsdvayfqkmkwqymildeaqaikssqssrwkcllgfhcrnrllltgtpiqnnmqelwallhfimpslfdsqlkrlhmilkpfmlrrvkkhvqkelgdkieidvfcelsyrqramyqslrnqisimdtlMnlvmqfrkvcnhpdlferadtsspffcghfaetgsflregtnvalgystrslveyrlprliwcdggrldkpgpgnlvagfrskylnhmmniwtpenirsslegienftwlrfvdtslqeayrashtdvfaravdlaskqnrlghmqivydepedkkwtpvhalfqicerenpkavaeittegvlrdlmniarvkyrelglcrlekaarprasappievvcdsrsavierenimfhpamrkalfgptpseikeasfgprpvtlypprallpapdhdkqrftnitvpsmarfvtdsgklakldellrelkegghrvllyfqmtrmidlmeeyltyrnykycrldgstkledrrdtvadfqtrpeififllstragglginlttadtvifydsdwnptidsqamdrahrlgqtkqvtvyrlitrgtieerirkralqkeevqrvvitgtgs/epwkrlppptvypvkearfekyippqldgreralaqppgqvaividngshsvragwnfedkprlaippimskyrdRkmgktfsfagsdcyaaRshirnafeagtgivsnwdvmehvldyvfvklgmnedmpivmteavanlpysrksmseiifecygapslvygidslfsfrhnqgqtglvvsssysathvipvynrkallsqairlnwggwhmaeymlkllklkyytgfpgklnssqtehmvrdfcyvsldydrelagyldwtgledrerivqypyteeeeelariaerkkesgrrlqeqaakmrlerlmkkeqeleyykdiqrrmqgeskkeikrlldeaelkdeaalervirdlersikrarqqrllksnwearqrakaekeaekarlaeearldeerrkndlegwleekrqlrlaklnqlkererlkadlgnrkslasqirmknialeaairslendllrydktfsydmtldaqrdwsksllhafrygprpfdpssqaethrvhlnverirvpevlfqpaaiagvdqaglveiagdilcqrlpslpgiqdapdaflrdvfltggntlfqnfderlrqglmallpvgaplrvrraqdaildawrgaagwacteeakaawitreeylekggeyikehdlgna/lirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlrdNiqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr/Rakaksrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/Rkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdnIqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg >8oo9_G:P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYOEM STRUCTURE INO80CORE HEXASOME COMPLEX ATPASE-DNA REFINEMENT STATE1 organism=? DNA sequence DC(L-40):DG(K40) DT(L-39):DA(K39) DA(L-38):DT(K38) DG(L-37):DC(K37) DG(L-36):DC(K36) DG(L-35):DC(K35) DA(L-34):DT(K34) DG(L-33):DC(K33) DT(L-32):DA(K32) DA(L-31):DT(K31) DA(L-30):DT(K30) DT(L-29):DA(K29) DC(L-28):DG(K28) DC(L-27):DG(K27) DC(L-26):DG(K26) DC(L-25):DG(K25) DT(L-24):DA(K24) DT(L-23):DA(K23) DG(L-22):DC(K22) DG(L-21):DC(K21) DC(L-20):DG(K20) chainG (256) MET1258 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qpkllncqlkeyqlkglnwlvnlyeqgingilademglgktvqsisvmaylaerydiwgpflvvapastlhnwqqevskfvpdfkvlpywgtaadrkvlrkfwdrkhttykkdspfhvmitsyqlvvsdvayfqkmkwqymildeaqaikssqssrwkcllgfhcrnrllltgtpiqnnmqelwallhfimpslfdsqlkrlhmilkpfmlrrvkkhvqkelgdkieidvfcelsyrqramyqslrnqisimdtlMnlvmqfrkvcnhpdlferapsmarfvtdsgklakldellrelkegghrvllyfqmtrmidlmeeyltyrnykycrldgstkledrrdtvadfqtrpeififllstragglginlttadtvifydsdwnptidsqamdrahrlgqtkqvtvyrlitrgtieerirkralqkeevqrvvitgtgs >8ooa_MNOPQR:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYOEM STRUCTURE INO80CORE HEXASOME COMPLEX HEXASOME REFINEMENT STATE1 organism=? DNA sequence DT(L-29):DA(K29) DC(L-28):DG(K28) DC(L-27):DG(K27) DC(L-26):DG(K26) DC(L-25):DG(K25) DT(L-24):DA(K24) DT(L-23):DA(K23) DG(L-22):DC(K22) DG(L-21):DC(K21) DC(L-20):DG(K20) DG(L-19):DC(K19) DG(L-18):DC(K18) DT(L-17):DA(K17) DT(L-16):DA(K16) DA(L-15):DT(K15) DA(L-14):DT(K14) DA(L-13):DT(K13) DA(L-12):DT(K12) DC(L-11):DG(K11) DG(L-10):DC(K10) DC(L-9):DG(K9) DG(L-8):DC(K8) DG(L-7):DC(K7) DG(L-6):DC(K6) DG(L-5):DC(K5) DG(L-4):DC(K4) DA(L-3):DT(K3) DC(L-2):DG(K2) DA(L-1):DT(K1) DG(L0):DC(K0) DC(L1):DG(K-1) DG(L2):DC(K-2) DC(L3):DG(K-3) DG(L4):DC(K-4) DT(L5):DA(K-5) DA(L6):DT(K-6) DC(L7):DG(K-7) DG(L8):DC(K-8) DT(L9):DA(K-9) DG(L10):DC(K-10) DC(L11):DG(K-11) DG(L12):DC(K-12) DT(L13):DA(K-13) DT(L14):DA(K-14) DT(L15):DA(K-15) DA(L16):DT(K-16) DA(L17):DT(K-17) DG(L18):DC(K-18) DC(L19):DG(K-19) DG(L20):DC(K-20) DG(L21):DC(K-21) DT(L22):DA(K-22) DG(L23):DC(K-23) DC(L24):DG(K-24) DT(L25):DA(K-25) DA(L26):DT(K-26) DG(L27):DC(K-27) DA(L28):DT(K-28) DG(L29):DC(K-29) DC(L30):DG(K-30) DT(L31):DA(K-31) DT(L32):DA(K-32) DG(L33):DC(K-33) DC(L34):DG(K-34) DT(L35):DA(K-35) DA(L36):DT(K-36) DC(L37):DG(K-37) DG(L38):DC(K-38) DA(L39):DT(K-39) DC(L40):DG(K-40) DC(L41):DG(K-41) DA(L42):DT(K-42) DA(L43):DT(K-43) DT(L45):DA(K-44) DG(L46):DC(K-46) DA(L47):DT(K-47) DG(L48):DC(K-48) DC(L49):DG(K-49) DG(L50):DC(K-50) DG(L51):DC(K-51) DC(L52):DG(K-52) DC(L53):DG(K-53) DT(L54):DA(K-54) DC(L55):DG(K-55) DG(L56):DC(K-56) DG(L57):DC(K-57) DC(L58):DG(K-58) DA(L59):DT(K-59) DC(L60):DG(K-60) DC(L61):DG(K-61) DG(L62):DC(K-62) DG(L63):DC(K-63) DG(L64):DC(K-64) DA(L65):DT(K-65) DT(L66):DA(K-66) DT(L67):DA(K-67) DC(L68):DG(K-68) DT(L69):DA(K-69) DC(L70):DG(K-70) DC(L71):DG(K-71) DA(L72):DT(K-72) chainM ( 5) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 15) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 1) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR prot.sequence lirkLpfqrlvreiaqdfktdlrfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpaiRrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgr/Rakaksrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/Rkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/kphRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdnIqgitkpairrlarrggvkrisgliYeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg >8oop_GJMNOPQR: title=CRYOEM STRUCTURE INO80CORE HEXASOME COMPLEX COMPOSITE MODEL STATE2 organism=? DNA sequence DT(K-72):DA(L72) DG(K-71):DC(L71) DG(K-70):DC(L70) DG(K-68):DC(L68) DA(K-67):DT(L67) DA(K-66):DT(L66) DT(K-65):DA(L65) DC(K-64):DG(L64) DC(K-63):DG(L63) DC(K-62):DG(L62) DG(K-61):DC(L61) DG(K-60):DC(L60) DT(K-59):DA(L59) DG(K-58):DC(L58) DC(K-57):DG(L57) DC(K-56):DG(L56) DG(K-55):DC(L55) DA(K-54):DT(L54) DG(K-53):DC(L53) DG(K-52):DC(L52) DC(K-51):DG(L51) DC(K-50):DG(L50) DG(K-49):DC(L49) DC(K-48):DG(L48) DT(K-47):DA(L47) DC(K-46):DG(L46) DA(K-44):DT(L45) DT(K-43):DA(L43) DT(K-42):DA(L42) DG(K-41):DC(L41) DG(K-40):DC(L40) DT(K-39):DA(L39) DC(K-38):DG(L38) DG(K-37):DC(L37) DT(K-36):DA(L36) DA(K-35):DT(L35) DG(K-34):DC(L34) DC(K-33):DG(L33) DA(K-32):DT(L32) DA(K-31):DT(L31) DG(K-30):DC(L30) DC(K-29):DG(L29) DT(K-28):DA(L28) DC(K-27):DG(L27) DT(K-26):DA(L26) DA(K-25):DT(L25) DG(K-24):DC(L24) DC(K-23):DG(L23) DA(K-22):DT(L22) DC(K-21):DG(L21) DC(K-20):DG(L20) DG(K-19):DC(L19) DC(K-18):DG(L18) DT(K-17):DA(L17) DT(K-16):DA(L16) DA(K-15):DT(L15) DA(K-14):DT(L14) DA(K-13):DT(L13) DC(K-12):DG(L12) DG(K-11):DC(L11) DC(K-10):DG(L10) DA(K-9):DT(L9) DC(K-8):DG(L8) DG(K-7):DC(L7) DT(K-6):DA(L6) DA(K-5):DT(L5) DC(K-4):DG(L4) DG(K-3):DC(L3) DC(K-2):DG(L2) DG(K-1):DC(L1) DC(K0):DG(L0) DT(K1):DA(L-1) DG(K2):DC(L-2) DC(K4):DA(L-3) DC(K5):DG(L-5) DC(K6):DG(L-6) DC(K7):DG(L-7) DC(K8):DG(L-8) DG(K9):DC(L-9) DC(K10):DG(L-10) DG(K11):DC(L-11) DT(K12):DA(L-12) DT(K13):DA(L-13) DT(K14):DA(L-14) DT(K15):DA(L-15) DA(K16):DT(L-16) DA(K17):DT(L-17) DC(K18):DG(L-18) DC(K19):DG(L-19) DG(K20):DC(L-20) DC(K21):DG(L-21) DC(K22):DG(L-22) DA(K23):DT(L-23) DA(K24):DT(L-24) DG(K25):DC(L-25) DG(K26):DC(L-26) DG(K27):DC(L-27) DG(K28):DC(L-28) DA(K29):DT(L-29) DT(K30):DA(L-30) DT(K31):DA(L-31) DA(K32):DT(L-32) DC(K33):DG(L-33) DT(K34):DA(L-34) chainG (256) MET1258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 chainJ ( 76) ARG92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 23) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 1) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 3) HIS39 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainR prot.sequence qpkllncqlkeyqlkglnwlvnlyeqgingilademglgktvqsisvmaylaerydiwgpflvvapastlhnwqqevskfvpdfkvlpywgtaadrkvlrkfwdrkhttykkdspfhvmitsyqlvvsdvayfqkmkwqymildeaqaikssqssrwkcllgfhcrnrllltgtpiqnnmqelwallhfimpslfdsqlkrlhmilkpfmlrrvkkhvqkelgdkieidvfcelsyrqramyqslrnqisimdtlMnlvmqfrkvcnhpdlferadtsspffcghfaetgsflregtnvalgystrslveyrlprliwcdggrldkpgpgnlvagfrskylnhmmniwtpenirsslegienftwlrfvdtslqeayrashtdvfaravdlaskqnrlghmqivydepedkkwtpvhalfqicerenpkavaeittegvlrdlmniarvkyrelglcrlekaarprasappievvcdsrsavierenimfhpamrkalfgptpseikeasfgprpvtlypprallpapdhdkqrftnitvpsmarfvtdsgklakldellrelkegghrvllyfqmtrmidlmeeyltyrnykycrldgstkledrrdtvadfqtrpeififllstragglginlttadtvifydsdwnptidsqamdrahrlgqtkqvtvyrlitrgtieerirkralqkeevqrvvitgtgs/epwkrlppptvypvkearfekyippqldgreralaqppgqvaividngshsvragwnfedkprlaippimskyrdRkmgktfsfagsdcyaarshirnafeagtgivsnwdvmehvldyvfvklgmnedmpivmteavanlpysrksmseiifecygapslvygidslfsfrhnqgqtglvvsssysathvipvynrkallsqairlnwggwhmaeymlkllklkyytgfpgklnssqtehmvrdfcyvsldydrelagyldwtgledrerivqypyteeeeelariaerkkesgrrlqeqaakmrlerlmkkeqeleyykdiqrrmqgeskkeikrlldeaelkdeaalervirdlersikrarqqrllksnwearqrakaekeaekarlaeearldeerrkndlegwleekrqlrlaklnqlkererlkadlgnleaairslendllrydktfsydmtldaqrdwsksllhafrygprpfdpssqaethrvhlnverirvpevlfqpaaiagvdqaglveiagdilcqrlpslpgiqdapdaflrdvfltggntlfqnfderlrqglmallpvgaplrvrraqdaildawrgaagwacteeakaawitreeylekggeyikehdlgna/lirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrq/RakaksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/Rkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdNIQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg >8oop_Q:Histone-fold; title=CRYOEM STRUCTURE INO80CORE HEXASOME COMPLEX COMPOSITE MODEL STATE2 organism=? DNA sequence DT(K-72):DA(L72) DG(K-71):DC(L71) DG(K-70):DC(L70) DG(K-68):DC(L68) DA(K-67):DT(L67) DA(K-66):DT(L66) DT(K-65):DA(L65) DC(K-64):DG(L64) DC(K-63):DG(L63) DC(K-62):DG(L62) DG(K-61):DC(L61) DG(K-60):DC(L60) DT(K-59):DA(L59) DG(K-58):DC(L58) DC(K-57):DG(L57) DC(K-56):DG(L56) DG(K-55):DC(L55) DA(K-54):DT(L54) DG(K-53):DC(L53) DG(K-52):DC(L52) DC(K-51):DG(L51) DC(K-50):DG(L50) DG(K-49):DC(L49) DC(K-48):DG(L48) DT(K-47):DA(L47) DC(K-46):DG(L46) DA(K-44):DT(L45) DT(K-43):DA(L43) DT(K-42):DA(L42) DG(K-41):DC(L41) DG(K-40):DC(L40) DT(K-39):DA(L39) DC(K-38):DG(L38) DG(K-37):DC(L37) DT(K-36):DA(L36) DA(K-35):DT(L35) DG(K-34):DC(L34) DC(K-33):DG(L33) DA(K-32):DT(L32) DA(K-31):DT(L31) DG(K-30):DC(L30) DC(K-29):DG(L29) DT(K-28):DA(L28) DC(K-27):DG(L27) DT(K-26):DA(L26) DA(K-25):DT(L25) DG(K-24):DC(L24) DC(K-23):DG(L23) DA(K-22):DT(L22) DC(K-21):DG(L21) DC(K-20):DG(L20) DG(K-19):DC(L19) DC(K-18):DG(L18) DT(K-17):DA(L17) DT(K-16):DA(L16) DA(K-15):DT(L15) DA(K-14):DT(L14) DA(K-13):DT(L13) DC(K-12):DG(L12) DG(K-11):DC(L11) DC(K-10):DG(L10) DA(K-9):DT(L9) DC(K-8):DG(L8) DG(K-7):DC(L7) DT(K-6):DA(L6) DA(K-5):DT(L5) DC(K-4):DG(L4) DG(K-3):DC(L3) DC(K-2):DG(L2) DG(K-1):DC(L1) DC(K0):DG(L0) DT(K1):DA(L-1) DG(K2):DC(L-2) DC(K4):DA(L-3) DC(K5):DG(L-5) DC(K6):DG(L-6) DC(K7):DG(L-7) DC(K8):DG(L-8) DG(K9):DC(L-9) DC(K10):DG(L-10) DG(K11):DC(L-11) DT(K12):DA(L-12) DT(K13):DA(L-13) DT(K14):DA(L-14) DT(K15):DA(L-15) DA(K16):DT(L-16) DA(K17):DT(L-17) DC(K18):DG(L-18) DC(K19):DG(L-19) DG(K20):DC(L-20) DC(K21):DG(L-21) DC(K22):DG(L-22) DA(K23):DT(L-23) DA(K24):DT(L-24) DG(K25):DC(L-25) DG(K26):DC(L-26) DG(K27):DC(L-27) DG(K28):DC(L-28) DA(K29):DT(L-29) DT(K30):DA(L-30) DT(K31):DA(L-31) DA(K32):DT(L-32) DC(K33):DG(L-33) DT(K34):DA(L-34) chainQ ( 3) HIS39 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger >8oos_GMNOPQR:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CRYOEM STRUCTURE INO80CORE HEXASOME COMPLEX ATPASE-HEXASOME REFINEMENT STATE 2 organism=? DNA sequence DA(L-34):DT(K34) DG(L-33):DC(K33) DT(L-32):DA(K32) DA(L-31):DT(K31) DA(L-30):DT(K30) DT(L-29):DA(K29) DC(L-28):DG(K28) DC(L-27):DG(K27) DC(L-26):DG(K26) DC(L-25):DG(K25) DT(L-24):DA(K24) DT(L-23):DA(K23) DG(L-22):DC(K22) DG(L-21):DC(K21) DC(L-20):DG(K20) DG(L-19):DC(K19) DG(L-18):DC(K18) DT(L-17):DA(K17) DT(L-16):DA(K16) DA(L-15):DT(K15) DA(L-14):DT(K14) DA(L-13):DT(K13) DA(L-12):DT(K12) DC(L-11):DG(K11) DG(L-10):DC(K10) DC(L-9):DG(K9) DG(L-8):DC(K8) DG(L-7):DC(K7) DG(L-6):DC(K6) DG(L-5):DC(K5) DG(L-4):DC(K4) DA(L-3):DT(K3) DC(L-2):DG(K2) DA(L-1):DT(K1) DG(L0):DC(K0) DC(L1):DG(K-1) DG(L2):DC(K-2) DC(L3):DG(K-3) DG(L4):DC(K-4) DT(L5):DA(K-5) DA(L6):DT(K-6) DC(L7):DG(K-7) DG(L8):DC(K-8) DT(L9):DA(K-9) DG(L10):DC(K-10) DC(L11):DG(K-11) DG(L12):DC(K-12) DT(L13):DA(K-13) DT(L14):DA(K-14) DT(L15):DA(K-15) DA(L16):DT(K-16) DA(L17):DT(K-17) DG(L18):DC(K-18) DC(L19):DG(K-19) DG(L20):DC(K-20) DG(L21):DC(K-21) DT(L22):DA(K-22) DG(L23):DC(K-23) DC(L24):DG(K-24) DT(L25):DA(K-25) DA(L26):DT(K-26) DG(L27):DC(K-27) DA(L28):DT(K-28) DG(L29):DC(K-29) DC(L30):DG(K-30) DT(L31):DA(K-31) DT(L32):DA(K-32) DG(L33):DC(K-33) DC(L34):DG(K-34) DT(L35):DA(K-35) DA(L36):DT(K-36) DC(L37):DG(K-37) DG(L38):DC(K-38) DA(L39):DT(K-39) DC(L40):DG(K-40) DC(L41):DG(K-41) DA(L42):DT(K-42) DA(L43):DT(K-43) DT(L44):DA(K-44) DT(L45):DA(K-45) DG(L46):DC(K-46) DA(L47):DT(K-47) DG(L48):DC(K-48) DC(L49):DG(K-49) DG(L50):DC(K-50) DG(L51):DC(K-51) DC(L52):DG(K-52) DC(L53):DG(K-53) DT(L54):DA(K-54) DC(L55):DG(K-55) DG(L56):DC(K-56) DG(L57):DC(K-57) DC(L58):DG(K-58) DA(L59):DT(K-59) DC(L60):DG(K-60) DC(L61):DG(K-61) DG(L62):DC(K-62) DG(L63):DC(K-63) DG(L64):DC(K-64) DA(L65):DT(K-65) DT(L66):DA(K-66) DT(L67):DA(K-67) DC(L68):DG(K-68) DT(L69):DA(K-69) DC(L70):DG(K-70) DC(L71):DG(K-71) DA(L72):DT(K-72) chainG (256) MET1258 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM ( 23) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainN ( 15) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainO ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 32) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainP ( 1) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainR prot.sequence qpkllncqlkeyqlkglnwlvnlyeqgingilademglgktvqsisvmaylaerydiwgpflvvapastlhnwqqevskfvpdfkvlpywgtaadrkvlrkfwdrkhttykkdspfhvmitsyqlvvsdvayfqkmkwqymildeaqaikssqssrwkcllgfhcrnrllltgtpiqnnmqelwallhfimpslfdsqlkrlhmilkpfmlrrvkkhvqkelgdkieidvfcelsyrqramyqslrnqisimdtlMnlvmqfrkvcnhpdlferapsmarfvtdsgklakldellrelkegghrvllyfqmtrmidlmeeyltyrnykycrldgstkledrrdtvadfqtrpeififllstragglginlttadtvifydsdwnptidsqamdrahrlgqtkqvtvyrlitrgtieerirkralqkeevqrvvitgtgs/lirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/vlrdniqgitkpaiRrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrq/RakaksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/Rkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/kphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rdnIQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg >8oos_Q:Histone-fold; title=CRYOEM STRUCTURE INO80CORE HEXASOME COMPLEX ATPASE-HEXASOME REFINEMENT STATE 2 organism=? DNA sequence DA(L-34):DT(K34) DG(L-33):DC(K33) DT(L-32):DA(K32) DA(L-31):DT(K31) DA(L-30):DT(K30) DT(L-29):DA(K29) DC(L-28):DG(K28) DC(L-27):DG(K27) DC(L-26):DG(K26) DC(L-25):DG(K25) DT(L-24):DA(K24) DT(L-23):DA(K23) DG(L-22):DC(K22) DG(L-21):DC(K21) DC(L-20):DG(K20) DG(L-19):DC(K19) DG(L-18):DC(K18) DT(L-17):DA(K17) DT(L-16):DA(K16) DA(L-15):DT(K15) DA(L-14):DT(K14) DA(L-13):DT(K13) DA(L-12):DT(K12) DC(L-11):DG(K11) DG(L-10):DC(K10) DC(L-9):DG(K9) DG(L-8):DC(K8) DG(L-7):DC(K7) DG(L-6):DC(K6) DG(L-5):DC(K5) DG(L-4):DC(K4) DA(L-3):DT(K3) DC(L-2):DG(K2) DA(L-1):DT(K1) DG(L0):DC(K0) DC(L1):DG(K-1) DG(L2):DC(K-2) DC(L3):DG(K-3) DG(L4):DC(K-4) DT(L5):DA(K-5) DA(L6):DT(K-6) DC(L7):DG(K-7) DG(L8):DC(K-8) DT(L9):DA(K-9) DG(L10):DC(K-10) DC(L11):DG(K-11) DG(L12):DC(K-12) DT(L13):DA(K-13) DT(L14):DA(K-14) DT(L15):DA(K-15) DA(L16):DT(K-16) DA(L17):DT(K-17) DG(L18):DC(K-18) DC(L19):DG(K-19) DG(L20):DC(K-20) DG(L21):DC(K-21) DT(L22):DA(K-22) DG(L23):DC(K-23) DC(L24):DG(K-24) DT(L25):DA(K-25) DA(L26):DT(K-26) DG(L27):DC(K-27) DA(L28):DT(K-28) DG(L29):DC(K-29) DC(L30):DG(K-30) DT(L31):DA(K-31) DT(L32):DA(K-32) DG(L33):DC(K-33) DC(L34):DG(K-34) DT(L35):DA(K-35) DA(L36):DT(K-36) DC(L37):DG(K-37) DG(L38):DC(K-38) DA(L39):DT(K-39) DC(L40):DG(K-40) DC(L41):DG(K-41) DA(L42):DT(K-42) DA(L43):DT(K-43) DT(L44):DA(K-44) DT(L45):DA(K-45) DG(L46):DC(K-46) DA(L47):DT(K-47) DG(L48):DC(K-48) DC(L49):DG(K-49) DG(L50):DC(K-50) DG(L51):DC(K-51) DC(L52):DG(K-52) DC(L53):DG(K-53) DT(L54):DA(K-54) DC(L55):DG(K-55) DG(L56):DC(K-56) DG(L57):DC(K-57) DC(L58):DG(K-58) DA(L59):DT(K-59) DC(L60):DG(K-60) DC(L61):DG(K-61) DG(L62):DC(K-62) DG(L63):DC(K-63) DG(L64):DC(K-64) DA(L65):DT(K-65) DT(L66):DA(K-66) DT(L67):DA(K-67) DC(L68):DG(K-68) DT(L69):DA(K-69) DC(L70):DG(K-70) DC(L71):DG(K-71) DA(L72):DT(K-72) chainQ ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger >8osk_A:Histone-fold; title=CLOCK-BMAL1 BOUND TO A NUCLEOSOME SHL+5.8 organism=? DNA sequence DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DG(I127):DC(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DC(I132):DG(J16) DG(I133):DC(J15) DT(I134):DA(J14) DG(I135):DC(J13) DC(I136):DG(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DT(I145):DA(J3) DG(I146):DC(J2) chainA ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence RyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge >8osl_O:HLH,_helix-loop-helix_DNA-binding_domain; title=CLOCK-BMAL1 BOUND TO THE NATIVE POR NUCLEOSOME organism=? DNA sequence DC(I1):DG(J145) DC(I2):DG(J144) DC(I3):DG(J143) DC(I4):DG(J142) DC(I5):DG(J141) DA(I6):DT(J140) DC(I7):DG(J139) DC(I8):DG(J138) DC(I9):DG(J137) DC(I10):DG(J136) DG(I11):DC(J135) DA(I12):DT(J134) DC(I13):DG(J133) DT(I14):DA(J132) DT(I15):DA(J131) DT(I16):DA(J130) DG(I17):DC(J129) DT(I18):DA(J128) DT(I19):DA(J127) DC(I20):DG(J126) DC(I21):DG(J125) DT(I22):DA(J124) DG(I23):DC(J123) DG(I24):DC(J122) DA(I25):DT(J121) DT(I26):DA(J120) DC(I27):DG(J119) DC(I28):DG(J118) DG(I29):DC(J117) DT(I30):DA(J116) DT(I31):DA(J115) DA(I32):DT(J114) DT(I33):DA(J113) DG(I34):DC(J112) DC(I35):DG(J111) DA(I36):DT(J110) DA(I37):DT(J109) DC(I38):DG(J108) DC(I39):DG(J107) DC(I40):DG(J106) DA(I41):DT(J105) DA(I42):DT(J104) DG(I43):DC(J103) DC(I44):DG(J102) DT(I45):DA(J101) DT(I46):DA(J100) DC(I47):DG(J99) DA(I48):DT(J98) DA(I49):DT(J97) DC(I50):DG(J96) DT(I51):DA(J95) DC(I52):DG(J94) DT(I53):DA(J93) DG(I54):DC(J92) DG(I55):DC(J91) DG(I56):DC(J90) DT(I57):DA(J89) DT(I58):DA(J88) DT(I59):DA(J87) DG(I60):DC(J86) DT(I61):DA(J85) DA(I62):DT(J84) DG(I63):DC(J83) DT(I64):DA(J82) DG(I65):DC(J81) DT(I66):DA(J80) DG(I67):DC(J79) DT(I68):DA(J78) DC(I69):DG(J77) DC(I70):DG(J76) DA(I71):DT(J75) DG(I72):DC(J74) DG(I73):DC(J73) DA(I74):DT(J72) DC(I75):DG(J71) DC(I76):DG(J70) DT(I77):DA(J69) DT(I78):DA(J68) DG(I79):DC(J67) DA(I80):DT(J66) DG(I81):DC(J65) DG(I82):DC(J64) DG(I83):DC(J63) DG(I84):DC(J62) DA(I85):DT(J61) DG(I86):DC(J60) DA(I87):DT(J59) DG(I88):DC(J58) DG(I89):DC(J57) DG(I90):DC(J56) DA(I91):DT(J55) DC(I92):DG(J54) DT(I93):DA(J53) DT(I94):DA(J52) DT(I95):DA(J51) DG(I96):DC(J50) DA(I97):DT(J49) DA(I98):DT(J48) DA(I99):DT(J47) DG(I100):DC(J46) DC(I101):DG(J45) DC(I102):DG(J44) DA(I103):DT(J43) DC(I104):DG(J42) DG(I105):DC(J41) DC(I106):DG(J40) DC(I107):DG(J39) DT(I108):DA(J38) DT(I109):DA(J37) DT(I110):DA(J36) DC(I111):DG(J35) DC(I112):DG(J34) DT(I113):DA(J33) DC(I114):DG(J32) DC(I115):DG(J31) DA(I116):DT(J30) DG(I117):DC(J29) DC(I118):DG(J28) DC(I119):DG(J27) DT(I120):DA(J26) DC(I121):DG(J25) DA(I122):DT(J24) DC(I123):DG(J23) DC(I124):DG(J22) DC(I125):DG(J21) DT(I126):DA(J20) DT(I127):DA(J19) DC(I128):DG(J18) DA(I129):DT(J17) DC(I130):DG(J16) DG(I131):DC(J15) DT(I132):DA(J14) DT(I133):DA(J13) DT(I134):DA(J12) DG(I135):DC(J11) DT(I136):DA(J10) DG(I137):DC(J9) DG(I138):DC(J8) DT(I139):DA(J7) DC(I140):DG(J6) DC(I141):DG(J5) DA(I142):DT(J4) DC(I143):DG(J3) DG(I144):DC(J2) DT(I145):DA(J1) DG(I146):DC(J0) DC(I147):DG(J-1) chainO ( 5) ARG39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 8) SER42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 ( 9) GLU43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence krvsRnkSEkkrrdqfnvlikelgsmlpgnarkmdkstvlqksidflrkhkettaqs >8osl_P:HLH,_helix-loop-helix_DNA-binding_domain; title=CLOCK-BMAL1 BOUND TO THE NATIVE POR NUCLEOSOME organism=? DNA sequence DC(I1):DG(J145) DC(I2):DG(J144) DC(I3):DG(J143) DC(I4):DG(J142) DC(I5):DG(J141) DA(I6):DT(J140) DC(I7):DG(J139) DC(I8):DG(J138) DC(I9):DG(J137) DC(I10):DG(J136) DG(I11):DC(J135) DA(I12):DT(J134) DC(I13):DG(J133) DT(I14):DA(J132) DT(I15):DA(J131) DT(I16):DA(J130) DG(I17):DC(J129) DT(I18):DA(J128) DT(I19):DA(J127) DC(I20):DG(J126) DC(I21):DG(J125) DT(I22):DA(J124) DG(I23):DC(J123) DG(I24):DC(J122) DA(I25):DT(J121) DT(I26):DA(J120) DC(I27):DG(J119) DC(I28):DG(J118) DG(I29):DC(J117) DT(I30):DA(J116) DT(I31):DA(J115) DA(I32):DT(J114) DT(I33):DA(J113) DG(I34):DC(J112) DC(I35):DG(J111) DA(I36):DT(J110) DA(I37):DT(J109) DC(I38):DG(J108) DC(I39):DG(J107) DC(I40):DG(J106) DA(I41):DT(J105) DA(I42):DT(J104) DG(I43):DC(J103) DC(I44):DG(J102) DT(I45):DA(J101) DT(I46):DA(J100) DC(I47):DG(J99) DA(I48):DT(J98) DA(I49):DT(J97) DC(I50):DG(J96) DT(I51):DA(J95) DC(I52):DG(J94) DT(I53):DA(J93) DG(I54):DC(J92) DG(I55):DC(J91) DG(I56):DC(J90) DT(I57):DA(J89) DT(I58):DA(J88) DT(I59):DA(J87) DG(I60):DC(J86) DT(I61):DA(J85) DA(I62):DT(J84) DG(I63):DC(J83) DT(I64):DA(J82) DG(I65):DC(J81) DT(I66):DA(J80) DG(I67):DC(J79) DT(I68):DA(J78) DC(I69):DG(J77) DC(I70):DG(J76) DA(I71):DT(J75) DG(I72):DC(J74) DG(I73):DC(J73) DA(I74):DT(J72) DC(I75):DG(J71) DC(I76):DG(J70) DT(I77):DA(J69) DT(I78):DA(J68) DG(I79):DC(J67) DA(I80):DT(J66) DG(I81):DC(J65) DG(I82):DC(J64) DG(I83):DC(J63) DG(I84):DC(J62) DA(I85):DT(J61) DG(I86):DC(J60) DA(I87):DT(J59) DG(I88):DC(J58) DG(I89):DC(J57) DG(I90):DC(J56) DA(I91):DT(J55) DC(I92):DG(J54) DT(I93):DA(J53) DT(I94):DA(J52) DT(I95):DA(J51) DG(I96):DC(J50) DA(I97):DT(J49) DA(I98):DT(J48) DA(I99):DT(J47) DG(I100):DC(J46) DC(I101):DG(J45) DC(I102):DG(J44) DA(I103):DT(J43) DC(I104):DG(J42) DG(I105):DC(J41) DC(I106):DG(J40) DC(I107):DG(J39) DT(I108):DA(J38) DT(I109):DA(J37) DT(I110):DA(J36) DC(I111):DG(J35) DC(I112):DG(J34) DT(I113):DA(J33) DC(I114):DG(J32) DC(I115):DG(J31) DA(I116):DT(J30) DG(I117):DC(J29) DC(I118):DG(J28) DC(I119):DG(J27) DT(I120):DA(J26) DC(I121):DG(J25) DA(I122):DT(J24) DC(I123):DG(J23) DC(I124):DG(J22) DC(I125):DG(J21) DT(I126):DA(J20) DT(I127):DA(J19) DC(I128):DG(J18) DA(I129):DT(J17) DC(I130):DG(J16) DG(I131):DC(J15) DT(I132):DA(J14) DT(I133):DA(J13) DT(I134):DA(J12) DG(I135):DC(J11) DT(I136):DA(J10) DG(I137):DC(J9) DG(I138):DC(J8) DT(I139):DA(J7) DC(I140):DG(J6) DC(I141):DG(J5) DA(I142):DT(J4) DC(I143):DG(J3) DG(I144):DC(J2) DT(I145):DA(J1) DG(I146):DC(J0) DC(I147):DG(J-1) chainP ( 6) SER85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 9) GLU88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 prot.sequence areahSqiEkrrrdkmnsfidelaslvptcnamsrkldkltvlrmavqhm >8ots_K:lambda_repressor-like_DNA-binding_domains; title=OCT4 AND MYC-MAX CO-BOUND TO A NUCLEOSOME organism=? DNA sequence DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DG(J115):DC(I33) DC(J116):DG(I32) DC(J117):DG(I31) DC(J118):DG(I30) DC(J119):DG(I29) DA(J120):DT(I28) DC(J121):DG(I27) DC(J122):DG(I26) DC(J123):DG(I25) DC(J124):DG(I24) DG(J125):DC(I23) DA(J126):DT(I22) DT(J127):DA(I21) DT(J128):DA(I20) DT(J129):DA(I19) DG(J130):DC(I18) DC(J131):DG(I17) DA(J132):DT(I16) DT(J133):DA(I15) DA(J134):DT(I14) DA(J135):DT(I13) DC(J136):DG(I12) DA(J137):DT(I11) DA(J138):DT(I10) DA(J139):DT(I9) DG(J140):DC(I8) chainK ( 45) THR182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 2 0 0 0 0 0 0 0 0 ( 48) CYS185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence dikalqkeleqfakllkqkritlgytqadvgltlgvlfgkvfsqTtiCrfealqlsfknmcklrpllqkwvee >8ott_D:Histone-fold; title=MYC-MAX BOUND TO A NUCLEOSOME AT SHL+5.8 organism=? DNA sequence DC(J2):DG(I146) DA(J3):DT(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DG(J12):DC(I136) DC(J13):DG(I135) DA(J14):DT(I134) DC(J15):DG(I133) DG(J16):DC(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DC(J21):DG(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DG(J129):DC(I19) DC(J130):DG(I18) DA(J131):DT(I17) DG(J132):DC(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DC(J145):DG(I3) chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8ouw_356KL: title=CRYO-EM STRUCTURE OF CMG HELICASE BOUND TO TIM-1/TIPN-1 AND HOMODIMERIC DNSN-1 ON FORK DNA (CAENORHABDITIS ELEGANS) organism=? DNA sequence DG(J18):DC(M29) DT(J19):DA(M28) DA(J20):DT(M27) DA(J21):DT(M26) DG(J22):DC(M25) DT(J23):DA(M24) DG(J24):DC(M23) DA(J25):DT(M22) DT(J26):DA(M21) DT(J27):DA(M20) DA(J28):DT(M19) DG(J29):DC(M18) DA(J30):DT(M17) DG(J31):DC(M16) DA(J32):DT(M15) DA(J33):DT(M14) DT(J34):DA(M13) DT(J35):DA(M12) DG(J36):DC(M11) DG(J37):DC(M10) DA(J38):DT(M9) DG(J39):DC(M8) DA(J40):DT(M7) DG(J41):DC(M6) DT(J42):DA(M5) DG(J43):DC(M4) DT(J44):DA(M3) DG(J45):DC(M2) DT(J46):DA(M1) chain3 chain5 (179) ILE210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 chain6 chainK chainL ( 1) ARG52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 0 0 0 0 0 0 0 0 prot.sequence draedarkqeiteqylnfldnqadtfhyrqkivkmmndgesrlvmnldeireilperaeglltqsvlemnclqsalqmainrsdvqavvktgfhvgfegtfgerhvnprtlkssylgnlvccegivtkcstvrqklltsvhycpatnkvlekkfadftmldtavtnnnyptedenknpletefghsvykdhqtftiqelpesapagqlpravdcvadldladrvkpgdrvriigvfrvlpnkqngvssgsfrsiiiinhiqmlsipnfepqdvkdvrkisksrnpfellarslapsicgheetkkallclllggmekilnngsrlrgdinvlligdpsvaksqllryvlrmapraitttgrgssgvgltaavtrrleagamvladrgvvcidefdkmsdidrtaihevmeqgrvtiskagihaklnarcsvlaaanpvygrynpfkspmenigmqdsllsrfdlifvlldehdadkdanvaehvlklhtyrtqgeadgtvlpsiyeentqwagiqdtkiltmdfmrkyihlarsvqpkltdeateyisevyadirsfditktdqertmpvtarqletlirlstaiakarfskkveredtekaynllhfacfkekpkarq/tgreliaeyrqlitqfrnfirdfstggfgmiyrdqlkrnyfsheyrleinlnhlknfdediemklrkfpgkvlpaleeaakivadeittprpkgeeklhdiqvtltldeyptslrqvksaqvsqvvkisgiivaaaqvrskatkvtlqcrqckhtipdvsikpglegfalprtcaacpIdpyimlpdkcecvdyqtlklqenpedvphgemprhlqlfteryltdkvvpgnrvtivgvysikkgirtpylrvlgihmetfttftpeeermfktlaqrkdayeliaksiapsiygsadikksiacllfggarkklpdgitrrgdinvlllgdpgtaksqllkfveqvspigvytsgamvladggvvcidefdkiheameqqtisiakagitttlnsrcsvlaaansmptilsrfdmiyivkhdvlkdatlakhvievhvnasaaketmfdtdgfltieflkkfvtyarlncgprltpqaseklvnhyvkmrnppitvrqleaivriaesiakmelqqfatdkhveealrlfrvstieaaatg/mdniiggqaqqvedtdgtrvqnefskflksfkdqknefiyksamkelvqpekntifinmqhlykfsnnlattielqyyrvypfmcealhlatldacdeserqqmfkkqlyvslfnldaktkvrelsadkvgglvriagqivrthpvhpelsracfvcedcgvttrdvqqqfrytqptkCanpqcmnrtrfsldvnsstfvdfqkiriqetqaelprgsiprtvdvivrgemvetvqpgdkcdivgtlivipdiaqlstpglraetsnqsegitglkalgvrdltykmaflachiqqteyldlwskmstedratlkkmsddkkieknivdslfpniygnhevklgvllmllggvakksrdegtslrgdinvclvgdpstaksqvlkaveefspraiytsgkassaagltaavvkdeesfefvieagalmladngvccidefdkmdlkdqvaiheameqqtisitkagvkatlnarasilaaanpvngrydrsrplkynvqmsapimsrfdlffvlvdecnevtdyaiarrildnhraisehterdsvykiddikkyiafarcfkpkisdkaaetlvreykklrmsdsnnaatsswritvrqleslvrlsealarlhcgkevlvehvekaaellnksivrfkeykqlsdvlvlhmrsdednqkqsalvewylstnvqkticervihrlihqdhvlleveqgedptlcvh/mnvlvqgavhalgyyedgkysrepdcyesirdlirylredgddhtariecgrhnlveqdlvpmvkcedltddefdiairlmvnlcqpaistmrgkppadrdqwkmyweleenlrraktafsdahfftaikkridnyfidteyedrderlrlvverivllikyvfsinpdtsegrrtriEdsshdrviiaflesgidktlmhianqprekefhvtildifalilkeqtaedlatkseevstaeqkkteeefrkiienhvvketqkrksfsrfggsytikglkgisanssqvvfkpiqnvekhnflddrkakkraprnrrpfeidtnshfassevrgmlrdmviriietcfnrlmksskttvfvqvqktsqinyfflikfvlrfvrlsrqdhllerisecigveafhennvqlteyvenattlkgveakshglkaqyalgaynelvllhryiyehakeenerkfakralehivnveeyrelpifiikkfsssvlsnnflrelvltthhymklverfvktgalkkvtkkvkveeidfqfdsyvckfsnvdvlkwyvfllndfsknstelnqalvkmlhriafdlklpiklyqvslfqvfskvnehfthlskdlrkssrlyelyqfgfhllkkffskftgdlaiealfwkgprecfeien/Rlalneriltgpkgisalretlkdfkpnpkddpyanleklmkkyaywghlmfpkmktedvlnrvetlgtrrqvkvfmikhrl >8ouw_47: title=CRYO-EM STRUCTURE OF CMG HELICASE BOUND TO TIM-1/TIPN-1 AND HOMODIMERIC DNSN-1 ON FORK DNA (CAENORHABDITIS ELEGANS) organism=? DNA sequence DT(I4) DT(I5) DT(I6) DT(I7) DT(I8) DT(I9) DT(I10) DT(I11) DT(I12) chain4 (405) ARG508 12 7 0 0 0 0 0 0 0 chain7 (403) LYS429 0 0 1 5 0 0 0 0 0 prot.sequence qprlyvwgtricvadvqrsfrdflttfkisqlaedenmmtghdealheidvnhpyymerllecndaevthinlnlkhlnafsealyrkviaypadvipyldivvnevfaerfnrtlaqsielrpfnatrnmrglnpndvdqlitisgmvtrtsslipemrsgyfqcavcafgiesevdkgrieepvvctncsnthcfqlvhnrsvfldkqvvklqespddmpsgetphtvsvyahgslvesvqpgdritvtgifratgmkvnpkqralasvyrtsidalhfrkmdtsrlhqdngetiteeriqqiielskrpdimdalaqsiapsiyehddvkrgllcllfggtrkddettnktklrseinillcgdpgtsksqmlqyvyrllprsqytsgkgssavgltasvsRdadtkqlvlqtgalvladngvccidefdkmnesarsvlhevmeqqtlsiakagiicqlnarasvlaaanpvdskwnrnktivenitlphtllsrfdliflivdaqdemqdrrlgnhlvslyfehvdmnllrdyiayakanihpklseeasqfiiekylfmrkagaqhgqitayprqleslirlseahakirlsqevsvddvekaftlwrealkq/tyntdwaaektkirsffdeyyvdnedgsgkafpyrdqvfeiarrdkqaivvnvdhikesdipdalelseaitsntkryevlfkdtisdmiqdylgdkqapvidaldaymfqrlhmdrnlqdkrkkyppqllqrfevyfttddaahetcvrnikateighlvsmkgvviratevkpcvevmtytcdtcaaevyqpvkgmqftppvncpnkecveakangrlhmqlrgskfvkfqelkiqelseqvpvgsiprtmtvhvygemtrkcntgnvvhvsgvflpimlvadtyleahyinnlddngvqsaelevlrrkgdnyetlaasiapeifghvdvkkcllmalvggndnssngmkirgcinvlmmgdpgvaksqllgyvnrlaprsqyttgrgssgvgltaavmKdpvtgemsleggalvladggiccidefdkmmdhdrtaihevmeqqtisiakagimttlnartaiiaaanpaygrynpnrsieqnvdlpaallsrfdlillmqdkadrendkilaehityvhqhgchpnrekkdlisletlreyislcktytptvdpalreriveayvemrrdaryssdptfvsprmilgivrmataraklrlstivdesdveealrlmqfakdslrpeq >8ouw_7:Nucleic_acid-binding_proteins;P-loop_containing_nucleoside_triphosphate_hydrolases; title=CRYO-EM STRUCTURE OF CMG HELICASE BOUND TO TIM-1/TIPN-1 AND HOMODIMERIC DNSN-1 ON FORK DNA (CAENORHABDITIS ELEGANS) organism=? DNA sequence DT(I4) DT(I5) DT(I6) DT(I7) DT(I8) DT(I9) DT(I10) DT(I11) DT(I12) chain7 (403) LYS429 0 0 1 5 0 0 0 0 0 prot.sequence tyntdwaaektkirsffdeyyvdnedgsgkafpyrdqvfeiarrdkqaivvnvdhikesdipdalelseaitsntkryevlfkdtisdmiqdylgdkqapvidaldaymfqrlhmdrnlqdkrkkyppqllqrfevyfttddaahetcvrnikateighlvsmkgvviratevkpcvevmtytcdtcaaevyqpvkgmqftppvncpnkecveakangrlhmqlrgskfvkfqelkiqelseqvpvgsiprtmtvhvygemtrkcntgnvvhvsgvflpimlvadtyleahyinnlddngvqsaelevlrrkgdnyetlaasiapeifghvdvkkcllmalvggndnssngmkirgcinvlmmgdpgvaksqllgyvnrlaprsqyttgrgssgvgltaavmKdpvtgemsleggalvladggiccidefdkmmdhdrtaihevmeqqtisiakagimttlnartaiiaaanpaygrynpnrsieqnvdlpaallsrfdlillmqdkadrendkilaehityvhqhgchpnrekkdlisletlreyislcktytptvdpalreriveayvemrrdaryssdptfvsprmilgivrmataraklrlstivdesdveealrlmqfakdslrpeq >8ovw_ABILN: title=CRYO-EM STRUCTURE OF CBF1-CCAN BOUND TOPOLOGICALLY TO CENTROMERIC DNA organism=? DNA sequence DT(E2):DA(D153) DA(E3):DT(D152) DA(E4):DT(D151) DG(E5):DC(D150) DT(E6):DA(D149) DC(E7):DG(D148) DA(E8):DT(D147) DC(E9):DG(D146) DA(E10):DT(D145) DT(E11):DA(D144) DG(E12):DC(D143) DG(E13):DC(D142) DT(E14):DA(D141) DG(E15):DC(D140) DC(E16):DG(D139) DC(E17):DG(D138) DG(E18):DC(D137) DA(E19):DT(D136) DG(E20):DC(D135) DG(E21):DC(D134) DC(E22):DG(D133) DC(E23):DG(D132) DG(E24):DC(D131) DC(E25):DG(D130) DT(E26):DA(D129) DC(E27):DG(D128) DA(E28):DT(D127) chainA ( 7) HIS227 0 0 0 0 0 0 0 0 0 4 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) GLU231 0 0 0 0 0 0 0 0 0 7 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) ARG234 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG235 0 0 0 0 0 0 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 6) ARG223 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 10) HIS227 0 0 0 2 9 12 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 13) VAL230 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 14) GLU231 0 0 0 0 1 11 12 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 17) ARG234 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 18) ARG235 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI (192) LYS216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 chainL chainN prot.sequence kqrkdsHkevErrRRenintainvlsdllpvresskaailacaaeyiqklketdeaniekwtlqkllseqnasqlasaneklqeelgnaykeieymkrvlr/ewkkqRkdsHkeVErrRRenintainvlsdllpvresskaailacaaeyiqklketdeaniekwtlqkllseqnasqlasaneklqeelgnaykeieymkrvlrkeg/slilddiilsltkttlsllyekskqyglsspqlqalvrllcetsiidtvtkvyivencflpdgyltkellleiinhlgtptvfsryriqtppvlqsalckwlvhvnisssiwlhlwqfsflqkwitplviwqattpvdvkpwklsiikrcamhpgyrdapgsatlilqrfqclvgassqitesiitincnrKtlkshrnlkldahflsilkrilsrahpanfpadtvqntidmylseihqlgadstvslwdvtsleqlaqnwpqlhipndvdymmkprkvmsrdslkhlyssiiliknsrdessspyewciwqlkrcfahqietpqevipiiisvssmdnklssriiqtfcnlkylkldeltlkkvcggilplwkpelisgtreffvkfmasifmwstrdghdnnctfsetcfyvlqmitnwvlddklialgltllhdmqslltldkifnnatsnrfstmafissldiltqlskqtksdyaiqylivgpdimnkvfssddplllsaacrylvatknklmqypstnkfvrmqnqyimdltnylyrnkvlsskslfgvspdffkqilenlyiptadfknakfftitgipalsyiciiilrrletaentkikftsgiineetfnnffrvhhdeigqhgwikgvnnihdlrvkilmhlsntanpyrdiaaflftylkslskys/pytwkflgiskqlslengiaklnqllnlevdldiqtirvpsdpdggtaadeyiryemrldisnldegtyskfiflgnskmevpmflcycgtdnrnevvlqwlkaeygvimwpikfeqktmikladasivhvtkenieqitwfssklyfepetqdknlrqfsieipresceglalgygntmhpyndaivpyiYnetgmaverlpltsvilaghtkimresivtstrslrnrvlavvlqsiqf/elrlednyvptsdtlvvfkqlmklpvtvlydltlswfakfggsfdgdiylltetldlliekgvrrnvivnrilyvywpdglnvfqlaeidchlmiskpekfkwlpskalrgdgkpyvvklqpakfienlqtdlakiyhchvymfkhpslpvlitriqlfdsnldkfqgkplisrrpyyvafplnspiifhsVdkdiyarlvlqsisrtiseretiifkpvqkipvksihnimtllgpsrfaesmgpwecyasanfersplhdykkhqgltgkkvmvrefddsflndgkeepeirrlrleknmikfkgsangvmsrysslvpiekvgftlkneinsriitiklkfngndifgglhelcdknlinidkvpgwlagengsfsgtimngdfqreq >8ovw_I: title=CRYO-EM STRUCTURE OF CBF1-CCAN BOUND TOPOLOGICALLY TO CENTROMERIC DNA organism=? DNA sequence DT(E2):DA(D153) DA(E3):DT(D152) DA(E4):DT(D151) DG(E5):DC(D150) DT(E6):DA(D149) DC(E7):DG(D148) DA(E8):DT(D147) DC(E9):DG(D146) DA(E10):DT(D145) DT(E11):DA(D144) DG(E12):DC(D143) DG(E13):DC(D142) DT(E14):DA(D141) DG(E15):DC(D140) DC(E16):DG(D139) DC(E17):DG(D138) DG(E18):DC(D137) DA(E19):DT(D136) DG(E20):DC(D135) DG(E21):DC(D134) DC(E22):DG(D133) DC(E23):DG(D132) DG(E24):DC(D131) DC(E25):DG(D130) DT(E26):DA(D129) DC(E27):DG(D128) DA(E28):DT(D127) chainI (192) LYS216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 prot.sequence slilddiilsltkttlsllyekskqyglsspqlqalvrllcetsiidtvtkvyivencflpdgyltkellleiinhlgtptvfsryriqtppvlqsalckwlvhvnisssiwlhlwqfsflqkwitplviwqattpvdvkpwklsiikrcamhpgyrdapgsatlilqrfqclvgassqitesiitincnrKtlkshrnlkldahflsilkrilsrahpanfpadtvqntidmylseihqlgadstvslwdvtsleqlaqnwpqlhipndvdymmkprkvmsrdslkhlyssiiliknsrdessspyewciwqlkrcfahqietpqevipiiisvssmdnklssriiqtfcnlkylkldeltlkkvcggilplwkpelisgtreffvkfmasifmwstrdghdnnctfsetcfyvlqmitnwvlddklialgltllhdmqslltldkifnnatsnrfstmafissldiltqlskqtksdyaiqylivgpdimnkvfssddplllsaacrylvatknklmqypstnkfvrmqnqyimdltnylyrnkvlsskslfgvspdffkqilenlyiptadfknakfftitgipalsyiciiilrrletaentkikftsgiineetfnnffrvhhdeigqhgwikgvnnihdlrvkilmhlsntanpyrdiaaflftylkslskys >8ow1_A:HLH,_helix-loop-helix_DNA-binding_domain;USP8_N-terminal_domain-like; title=CRYO-EM STRUCTURE OF THE YEAST INNER KINETOCHORE BOUND TO A CENP-A NUCLEOSOME. organism=? DNA sequence DT(E4):DA(D152) DC(E5):DG(D151) DA(E6):DT(D150) DA(E7):DT(D149) DT(E8):DA(D148) DG(E9):DC(D147) DA(E10):DT(D146) DA(E11):DT(D145) DA(E12):DT(D144) DT(E13):DA(D143) DA(E14):DT(D142) DT(E15):DA(D141) DA(E16):DT(D140) DT(E17):DA(D139) DA(E18):DT(D138) DT(E19):DA(D137) DT(E20):DA(D136) DT(E21):DA(D135) DC(E22):DG(D134) DT(E23):DA(D133) DT(E24):DA(D132) DA(E25):DT(D131) DC(E26):DG(D130) DT(E27):DA(D129) DA(E28):DT(D128) DT(E29):DA(D127) DT(E30):DA(D126) DT(E31):DA(D125) DC(E32):DG(D124) DT(E34):DA(D123) DT(E35):DA(D122) DT(E36):DA(D120) DT(E37):DA(D119) DT(E38):DA(D118) DA(E39):DT(D117) DA(E40):DT(D116) DC(E41):DG(D115) DT(E42):DA(D114) DT(E43):DA(D113) DT(E44):DA(D112) DC(E45):DG(D111) DG(E46):DC(D110) DG(E47):DC(D109) DA(E48):DT(D108) DA(E49):DT(D107) DA(E50):DT(D106) DT(E51):DA(D105) DC(E52):DG(D104) DA(E53):DT(D103) DA(E54):DT(D102) DA(E55):DT(D101) DT(E56):DA(D100) DC(E58):DG(D98) DA(E59):DT(D97) DC(E60):DG(D96) DT(E61):DA(D95) DA(E62):DT(D94) DA(E63):DT(D93) DT(E64):DA(D92) DA(E65):DT(D91) DT(E66):DA(D90) DT(E67):DA(D89) DA(E68):DT(D88) DA(E69):DT(D87) DA(E70):DT(D86) DA(E71):DT(D85) DC(E72):DG(D84) DG(E73):DC(D83) DC(E74):DG(D82) DG(E75):DC(D81) DG(E76):DC(D80) DG(E77):DC(D79) DG(E78):DC(D78) DG(E79):DC(D77) DA(E80):DT(D76) DC(E81):DG(D75) DA(E82):DT(D74) DG(E83):DC(D73) DC(E84):DG(D72) DG(E85):DC(D71) DC(E86):DG(D70) DG(E87):DC(D69) DT(E88):DA(D68) DA(E89):DT(D67) DC(E90):DG(D66) DG(E91):DC(D65) DT(E92):DA(D64) DG(E93):DC(D63) DC(E94):DG(D62) DG(E95):DC(D61) DT(E96):DA(D60) DT(E97):DA(D59) DT(E98):DA(D58) DA(E99):DT(D57) DA(E100):DT(D56) DG(E101):DC(D55) DC(E102):DG(D54) DG(E103):DC(D53) DG(E104):DC(D52) DT(E105):DA(D51) DG(E106):DC(D50) DC(E107):DG(D49) DT(E108):DA(D48) DG(E110):DC(D46) DA(E111):DT(D45) DG(E112):DC(D44) DC(E113):DG(D43) DT(E114):DA(D42) DG(E115):DC(D41) DT(E116):DA(D40) DC(E117):DG(D39) DT(E118):DA(D38) DA(E119):DT(D37) DC(E120):DG(D36) DG(E121):DC(D35) DA(E122):DT(D34) DC(E123):DG(D33) DC(E124):DG(D32) DA(E125):DT(D31) DA(E126):DT(D30) DT(E127):DA(D29) DT(E128):DA(D28) DG(E129):DC(D27) DA(E130):DT(D26) DG(E131):DC(D25) DC(E132):DG(D24) DG(E133):DC(D23) DG(E134):DC(D22) DC(E135):DG(D21) DC(E136):DG(D20) DT(E137):DA(D19) DC(E138):DG(D18) DG(E139):DC(D17) DG(E140):DC(D16) DC(E141):DG(D15) DA(E142):DT(D14) DC(E143):DG(D13) DC(E144):DG(D12) DA(E145):DT(D11) DT(E146):DA(D10) DG(E147):DC(D9) DT(E148):DA(D8) DG(E149):DC(D7) DA(E150):DT(D6) DC(E151):DG(D5) DT(E152):DA(D4) DT(E153):DA(D3) DA(E154):DT(D2) DT(E155):DA(D1) chainA ( 7) HIS227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 10 0 0 0 0 0 0 0 0 0 0 ( 11) GLU231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 7 0 0 0 0 0 0 0 0 0 0 ( 14) ARG234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 15) ARG235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 prot.sequence kqrkdsHkevErrRRenintainvlsdllpvresskaailacaaeyiqklketdeaniekwtlqkllseqnasqlasaneklqeelgnaykeieymkrvlrkegieyedm >8ow4_B:p53-like_transcription_factors;E_set_domains; title=2.75 ANGSTROM CRYSTAL STRUCTURE OF HUMAN NFAT1 WITH BOUND DNA organism=Homo sapiens DNA sequence DG(W4003):DC(C5015) DC(W4004):DG(C5014) DT(W4005):DA(C5013) DG(W4006):DC(C5012) DG(W4007):DC(C5011) DA(W4008):DT(C5010) DA(W4009):DT(C5009) DA(W4010):DT(C5008) DA(W4011):DT(C5007) DA(W4012):DT(C5006) DT(W4013):DA(C5005) DA(W4014):DT(C5004) DG(W4015):DC(C5003) chainB ( 39) ARG421 0 0 0 4 11 2 0 0 0 0 0 0 0 ( 42) TYR424 0 0 0 0 0 6 9 0 0 0 0 0 0 ( 44) THR426 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 45) GLU427 0 0 0 0 5 4 0 0 0 0 0 0 0 ( 48) ARG430 0 0 13 11 4 0 0 0 0 0 0 0 0 (189) GLN571 0 0 0 0 5 10 1 0 0 0 0 0 0 (190) ARG572 0 0 0 0 0 0 0 3 8 0 0 0 0 prot.sequence hhhhhhvgtaslpplewplssqsgsyelrievqpkphhRahYeTEgsRgavkaptgghpvvqlhgymenkplglqifigtaderilkphafyqvhritgktvtttsyekivgntkvleiplepknnmratidcagilklrnadielrkgetdigrkntrvrlvfrvhipessgrivslqtasnpiecsQRsahelpmverqdtdsclvyggqqmiltgqnftseskvvftekttdgqqiwemeatvdkdksqpnmlfveipeyrnkhirtpvkvnfyvingkrkrsqpqhftyhpv >8ox0_ABCDEFGH:Histone-fold;PH_domain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=STRUCTURE OF APO TELOMERIC NUCLEOSOME organism=? DNA sequence DA(J-71):DT(I71) DT(J-70):DA(I70) DC(J-69):DG(I69) DT(J-68):DA(I68) DT(J-67):DA(I67) DA(J-66):DT(I66) DG(J-65):DC(I65) DG(J-64):DC(I64) DG(J-63):DC(I63) DT(J-62):DA(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DG(J-59):DC(I59) DG(J-58):DC(I58) DG(J-57):DC(I57) DT(J-56):DA(I56) DT(J-55):DA(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DT(J-49):DA(I49) DA(J-48):DT(I48) DG(J-47):DC(I47) DG(J-46):DC(I46) DG(J-45):DC(I45) DT(J-44):DA(I44) DT(J-43):DA(I43) DA(J-42):DT(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DG(J-39):DC(I39) DT(J-38):DA(I38) DT(J-37):DA(I37) DA(J-36):DT(I36) DG(J-35):DC(I35) DG(J-34):DC(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DT(J-31):DA(I31) DA(J-30):DT(I30) DG(J-29):DC(I29) DG(J-28):DC(I28) DG(J-27):DC(I27) DT(J-26):DA(I26) DT(J-25):DA(I25) DA(J-24):DT(I24) DG(J-23):DC(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DT(J-20):DA(I20) DT(J-19):DA(I19) DA(J-18):DT(I18) DG(J-17):DC(I17) DG(J-16):DC(I16) DG(J-15):DC(I15) DT(J-14):DA(I14) DT(J-13):DA(I13) DA(J-12):DT(I12) DG(J-11):DC(I11) DG(J-10):DC(I10) DG(J-9):DC(I9) DT(J-8):DA(I8) DT(J-7):DA(I7) DA(J-6):DT(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DG(J-3):DC(I3) DT(J-2):DA(I2) DT(J-1):DA(I1) DA(J0):DT(I0) DG(J1):DC(I-1) DG(J2):DC(I-2) DG(J3):DC(I-3) DT(J4):DA(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DG(J7):DC(I-7) DG(J8):DC(I-8) DG(J9):DC(I-9) DT(J10):DA(I-10) DT(J11):DA(I-11) DA(J12):DT(I-12) DG(J13):DC(I-13) DG(J14):DC(I-14) DG(J15):DC(I-15) DT(J16):DA(I-16) DT(J17):DA(I-17) DA(J18):DT(I-18) DG(J19):DC(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DT(J23):DA(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DT(J28):DA(I-28) DT(J29):DA(I-29) DA(J30):DT(I-30) DG(J31):DC(I-31) DG(J32):DC(I-32) DG(J33):DC(I-33) DT(J34):DA(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DG(J37):DC(I-37) DG(J38):DC(I-38) DG(J39):DC(I-39) DT(J40):DA(I-40) DT(J41):DA(I-41) DA(J42):DT(I-42) DG(J43):DC(I-43) DG(J44):DC(I-44) DG(J45):DC(I-45) DT(J46):DA(I-46) DT(J47):DA(I-47) DA(J48):DT(I-48) DG(J49):DC(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DT(J52):DA(I-52) DT(J53):DA(I-53) DA(J54):DT(I-54) DG(J55):DC(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DT(J58):DA(I-58) DT(J59):DA(I-59) DA(J60):DT(I-60) DG(J61):DC(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DT(J64):DA(I-64) DT(J65):DA(I-65) DA(J66):DT(I-66) DG(J67):DC(I-67) DG(J68):DC(I-68) DG(J69):DC(I-69) DT(J70):DA(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 3) HIS39 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 3) ARG17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 2) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 2) ARG26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 6) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kpHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera/akRhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/kRkrsrkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/rhrKVlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflEnvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/aRakaksrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk/kRkrsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >8ox1_C:Histone-fold; title=STRUCTURE OF TRF1CORE IN COMPLEX WITH TELOMERIC NUCLEOSOME organism=? DNA sequence DA(I-74):DT(J74) DT(I-73):DA(J73) DC(I-72):DG(J72) DA(I-71):DT(J71) DC(I-70):DG(J70) DC(I-69):DG(J69) DC(I-68):DG(J68) DT(I-67):DA(J67) DA(I-66):DT(J66) DA(I-65):DT(J65) DC(I-64):DG(J64) DC(I-63):DG(J63) DC(I-62):DG(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DA(I-59):DT(J59) DC(I-58):DG(J58) DC(I-57):DG(J57) DC(I-56):DG(J56) DT(I-55):DA(J55) DA(I-54):DT(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DC(I-51):DG(J51) DC(I-50):DG(J50) DT(I-49):DA(J49) DA(I-48):DT(J48) DA(I-47):DT(J47) DC(I-46):DG(J46) DC(I-45):DG(J45) DC(I-44):DG(J44) DT(I-43):DA(J43) DA(I-42):DT(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DC(I-39):DG(J39) DC(I-38):DG(J38) DT(I-37):DA(J37) DA(I-36):DT(J36) DA(I-35):DT(J35) DC(I-34):DG(J34) DC(I-33):DG(J33) DC(I-32):DG(J32) DT(I-31):DA(J31) DA(I-30):DT(J30) DA(I-29):DT(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DT(I-25):DA(J25) DA(I-24):DT(J24) DA(I-23):DT(J23) DC(I-22):DG(J22) DC(I-21):DG(J21) DC(I-20):DG(J20) DT(I-19):DA(J19) DA(I-18):DT(J18) DA(I-17):DT(J17) DC(I-16):DG(J16) DC(I-15):DG(J15) DC(I-14):DG(J14) DT(I-13):DA(J13) DA(I-12):DT(J12) DA(I-11):DT(J11) DC(I-10):DG(J10) DC(I-9):DG(J9) DC(I-8):DG(J8) DT(I-7):DA(J7) DA(I-6):DT(J6) DA(I-5):DT(J5) DC(I-4):DG(J4) DC(I-3):DG(J3) DC(I-2):DG(J2) DT(I-1):DA(J1) DA(I0):DT(J0) DA(I1):DT(J-1) DC(I2):DG(J-2) DC(I3):DG(J-3) DC(I4):DG(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DA(I7):DT(J-7) DC(I8):DG(J-8) DC(I9):DG(J-9) DC(I10):DG(J-10) DT(I11):DA(J-11) DA(I12):DT(J-12) DA(I13):DT(J-13) DC(I14):DG(J-14) DC(I15):DG(J-15) DC(I16):DG(J-16) DT(I17):DA(J-17) DA(I18):DT(J-18) DA(I19):DT(J-19) DC(I20):DG(J-20) DC(I21):DG(J-21) DC(I22):DG(J-22) DT(I23):DA(J-23) DA(I24):DT(J-24) DA(I25):DT(J-25) DC(I26):DG(J-26) DC(I27):DG(J-27) DC(I28):DG(J-28) DT(I29):DA(J-29) DA(I30):DT(J-30) DA(I31):DT(J-31) DC(I32):DG(J-32) DC(I33):DG(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DA(I37):DT(J-37) DC(I38):DG(J-38) DC(I39):DG(J-39) DC(I40):DG(J-40) DT(I41):DA(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DC(I44):DG(J-44) DC(I45):DG(J-45) DC(I46):DG(J-46) DT(I47):DA(J-47) DA(I48):DT(J-48) DA(I49):DT(J-49) DC(I50):DG(J-50) DC(I51):DG(J-51) DC(I52):DG(J-52) DT(I53):DA(J-53) DA(I54):DT(J-54) DA(I55):DT(J-55) DC(I56):DG(J-56) DC(I57):DG(J-57) DC(I58):DG(J-58) DT(I59):DA(J-59) DA(I60):DT(J-60) DA(I61):DT(J-61) DC(I62):DG(J-62) DC(I63):DG(J-63) DC(I64):DG(J-64) DT(I65):DA(J-65) DA(I66):DT(J-66) DA(I67):DT(J-67) DG(I68):DC(J-68) DA(I69):DT(J-69) DT(I70):DA(J-70) chainC ( 2) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 33) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aRakaksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk >8oy3_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TIME-RESOLVED SFX STRUCTURE OF THE CLASS II PHOTOLYASE COMPLEXED WITH A THYMINE DIMER (3 PICOSECOND PUMP-PROBE DELAY) organism=Methanosarcina mazei Go1 DNA sequence DT(F2):DA(E14) DG(F3):DC(E13) DC(F4):DG(E12) DG(F5):DC(E11) DC(F6):DG(E10) DG(F7):DC(E9) DA(F8):TTD(E7) DA(F9):DC(E6) DG(F10):DG(E5) DC(F11):DG(E4) DC(F12):DC(E3) chainB (220) ARG256 0 0 0 0 0 0 8 0 0 0 0 (221) ASN257 0 0 0 0 0 0 5 0 0 0 0 (265) GLU301 0 0 0 0 0 0 11 0 0 0 0 (269) TRP305 0 0 0 0 0 0 22 0 0 0 0 (343) MET379 0 0 0 0 0 0 20 0 0 0 0 (385) TRP421 0 0 0 0 0 0 11 0 0 0 0 (393) ARG429 0 0 0 0 0 0 6 26 10 0 0 (395) TRP431 0 0 0 0 0 38 6 0 0 0 0 (405) ARG441 0 0 0 0 0 4 7 0 0 0 0 (414) ARG450 2 8 13 12 0 0 0 0 0 0 0 prot.sequence mnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaahtfrpklyallpefleefpelepnsvtdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgymrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekysa >8oy4_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TIME-RESOLVED SFX STRUCTURE OF THE CLASS II PHOTOLYASE COMPLEXED WITH A THYMINE DIMER (300 PS PUMP-PROBE DELAY) organism=Methanosarcina mazei Go1 DNA sequence DC(E3):DC(F12) DG(E4):DC(F11) DG(E5):DG(F10) DC(E6):DA(F9) WUH(E7):DA(F8) DC(E9):DG(F7) DG(E10):DC(F6) DC(E11):DG(F5) DG(E12):DC(F4) DC(E13):DG(F3) DA(E14):DT(F2) chainB (159) HIS161 0 0 1 0 0 0 0 0 0 0 0 (220) ARG256 0 0 0 0 12 0 0 0 0 0 0 (221) ASN257 0 0 0 0 3 0 0 0 0 0 0 (265) GLU301 0 0 0 0 11 0 0 0 0 0 0 (269) TRP305 0 0 0 0 44 0 0 0 0 0 0 (343) MET379 0 0 0 0 19 0 0 0 0 0 0 (385) TRP421 0 0 0 0 16 0 0 0 0 0 0 (393) ARG429 0 0 16 56 2 0 0 0 0 0 0 (395) TRP431 0 0 0 0 5 20 0 0 0 0 0 (405) ARG441 0 0 0 0 3 1 0 0 0 0 0 (414) ARG450 0 0 0 0 0 0 0 11 11 5 2 prot.sequence mnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgymrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekysa >8oy5_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TIME-RESOLVED SFX STRUCTURE OF THE CLASS II PHOTOLYASE COMPLEXED WITH A THYMINE DIMER (1 NANOSECOND PUMP-PROBE DELAY) organism=Methanosarcina mazei Go1 DNA sequence DT(C2):DG(D13) DC(C3):DC(D12) DG(C4):DC(D11) DG(C5):DG(D10) DC(C6):DA(D9) WUH(C7):DA(D8) DC(C9):DG(D7) DG(C10):DC(D6) DC(C11):DG(D5) DG(C12):DC(D4) DC(C13):DG(D3) DA(C14):DT(D2) chainA (158) ALA160 0 0 0 0 0 1 0 0 0 0 0 0 (159) HIS161 0 0 0 0 2 0 0 0 0 0 0 0 (243) ARG256 0 0 0 0 0 9 0 0 0 0 0 0 (244) ASN257 0 0 0 0 0 1 0 0 0 0 0 0 (288) GLU301 0 0 0 0 0 12 0 0 0 0 0 0 (292) TRP305 0 0 0 0 0 50 0 0 0 0 0 0 (366) MET379 0 0 0 0 0 17 0 0 0 0 0 0 (408) TRP421 0 0 0 0 0 11 0 0 0 0 0 0 (416) ARG429 0 0 0 14 40 8 0 0 0 0 0 0 (418) TRP431 0 0 0 0 0 6 21 0 0 0 0 0 (428) ARG441 0 0 0 0 0 4 3 0 0 0 0 0 (437) ARG450 0 0 0 0 0 0 0 0 12 10 6 1 prot.sequence mnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvttlsdvletgvkallperallknkdplfepwhfepgekaakkvmesfiadrldsygalrndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldeiliwkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgymrmywakkilewsespekaleiaiclndryeldgrdpngyagiawsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekysald >8oy6_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TIME-RESOLVED SFX STRUCTURE OF THE CLASS II PHOTOLYASE COMPLEXED WITH A THYMINE DIMER (3 NANOSECOND PUMP-PROBE DELAY) organism=Methanosarcina mazei Go1 DNA sequence DT(C2):DA(D14) DC(C3):DG(D13) DG(C4):DC(D12) DG(C5):DC(D11) DC(C6):DG(D10) DT(C7):DA(D9) DT(C8):DA(D8) DC(C9):DG(D7) DG(C10):DC(D6) DC(C11):DG(D5) DG(C12):DC(D4) DC(C13):DG(D3) DA(C14):DT(D2) chainA (160) HIS161 0 0 1 2 0 0 0 0 0 0 0 0 0 (245) ARG256 0 0 0 0 0 3 4 0 0 0 0 0 0 (246) ASN257 0 0 0 0 0 0 1 0 0 0 0 0 0 (290) GLU301 0 0 0 0 0 14 0 0 0 0 0 0 0 (294) TRP305 0 0 0 0 0 51 0 0 0 0 0 0 0 (368) MET379 0 0 0 0 0 0 11 0 0 0 0 0 0 (410) TRP421 0 0 0 0 0 2 11 0 0 0 0 0 0 (418) ARG429 0 0 0 0 50 2 9 0 0 0 0 0 0 (420) TRP431 0 0 0 0 0 0 6 20 0 0 0 0 0 (430) ARG441 0 0 0 0 0 0 0 2 0 0 0 0 0 (439) ARG450 0 0 0 0 0 0 0 0 0 12 13 6 3 prot.sequence imnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheYaaHtfrpklyallpefleefpelepnsvtptlsdvletgvkallperallknkdplfepwhfepgekaakkvmesfiadrldsygalRNdptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgymrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekysaldklaa >8oy7_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TIME-RESOLVED SFX STRUCTURE OF THE CLASS II PHOTOLYASE COMPLEXED WITH A THYMINE DIMER (10 NANOSECOND PUMP-PROBE DELAY) organism=Methanosarcina mazei Go1 DNA sequence DT(D2):DA(C14) DG(D3):DC(C13) DC(D4):DG(C12) DG(D5):DC(C11) DC(D6):DG(C10) DG(D7):DC(C9) DA(D8):DT(C8) DA(D9):DT(C7) DG(D10):DC(C6) DC(D11):DG(C5) DC(D12):DG(C4) DG(D13):DC(C3) DA(D14):DT(C2) chainA (158) HIS161 0 0 0 0 0 0 0 0 1 1 0 0 0 (242) ARG256 0 0 0 0 0 0 5 2 0 0 0 0 0 (243) ASN257 0 0 0 0 0 0 4 0 0 0 0 0 0 (287) GLU301 0 0 0 0 0 0 1 11 0 0 0 0 0 (291) TRP305 0 0 0 0 0 0 0 46 0 0 0 0 0 (365) MET379 0 0 0 0 0 0 11 0 0 0 0 0 0 (407) TRP421 0 0 0 0 0 0 8 4 0 0 0 0 0 (415) ARG429 0 0 0 0 0 0 9 2 26 0 0 0 0 (417) TRP431 0 0 0 0 0 38 6 0 0 0 0 0 0 (427) ARG441 0 0 0 0 0 4 0 0 0 0 0 0 0 (436) ARG450 1 8 13 15 0 0 0 0 0 0 0 0 0 prot.sequence npkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheYaaHtfrpklyallpefleefpelepnsvttlsdvletgvkallperallknkdplfepwhfepgekaakkvmesfiadrldsygalRNdptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgymrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekysaldklaa >8oy8_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TIME-RESOLVED SFX STRUCTURE OF THE CLASS II PHOTOLYASE COMPLEXED WITH A THYMINE DIMER (30 NANOSECOND TIMEPOINT) organism=Methanosarcina mazei Go1 DNA sequence DC(E3):DG(F13) DG(E4):DC(F12) DG(E5):DC(F11) DC(E6):DG(F10) DT(E7):DA(F9) DT(E8):DA(F8) DC(E9):DG(F7) DG(E10):DC(F6) DC(E11):DG(F5) DG(E12):DC(F4) DC(E13):DG(F3) DA(E14):DT(F2) chainB (159) HIS161 0 1 2 4 0 0 0 0 0 0 0 0 (222) ARG256 0 0 0 0 4 6 0 0 0 0 0 0 (223) ASN257 0 0 0 0 0 5 0 0 0 0 0 0 (266) ASP300 0 0 0 0 2 0 0 0 0 0 0 0 (267) GLU301 0 0 0 0 14 1 0 0 0 0 0 0 (271) TRP305 0 0 0 0 53 0 0 0 0 0 0 0 (345) MET379 0 0 0 0 0 9 0 0 0 0 0 0 (387) TRP421 0 0 0 0 3 8 0 0 0 0 0 0 (395) ARG429 0 0 0 48 2 2 0 0 0 0 0 0 (397) TRP431 0 0 0 0 0 3 14 0 0 0 0 0 (407) ARG441 0 0 0 0 0 0 2 0 0 0 0 0 (416) ARG450 0 0 0 0 0 0 0 0 14 13 5 1 prot.sequence mnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpkdplfepwhfepgekaakkvmesfiadrldsygalRNdptknmlsnlspylhfgqissqrvvlevekaesnpgskkaflDEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgymrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekysa >8oy9_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TIME-RESOLVED SFX STRUCTURE OF THE CLASS II PHOTOLYASE COMPLEXED WITH A THYMINE DIMER (1 MICROSECOND PUMP-PROBE DELAY) organism=Methanosarcina mazei Go1 DNA sequence DT(F2):DA(E14) DG(F3):DC(E13) DC(F4):DG(E12) DG(F5):DC(E11) DC(F6):DG(E10) DG(F7):DC(E9) DA(F8):DT(E8) DA(F9):DT(E7) DG(F10):DC(E6) DC(F11):DG(E5) DC(F12):DG(E4) DG(F13):DC(E3) chainB (216) ARG256 0 0 0 0 0 0 8 2 0 0 0 0 (217) ASN257 0 0 0 0 0 0 7 0 0 0 0 0 (261) GLU301 0 0 0 0 0 0 5 14 0 0 0 0 (265) TRP305 0 0 0 0 0 0 0 52 0 0 0 0 (339) MET379 0 0 0 0 0 0 8 0 0 0 0 0 (381) TRP421 0 0 0 0 0 0 2 6 0 0 0 0 (389) ARG429 0 0 0 0 0 0 2 5 37 0 0 0 (391) TRP431 0 0 0 0 0 24 5 0 0 0 0 0 (401) ARG441 0 0 0 0 0 4 0 0 0 0 0 0 (410) ARG450 2 7 16 15 0 0 0 0 0 0 0 0 prot.sequence mnpkriralksqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaahtfrpklyallpefleefpelepnsvtpfepwhfepgekaakkvmesfiadrldsygalRNdptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgymrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkiRymsyegckRkfdvklyieky >8oya_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TIME-RESOLVED SFX STRUCTURE OF THE CLASS II PHOTOLYASE COMPLEXED WITH A THYMINE DIMER (10 MICROSECOND PUMP PROBE DELAY) organism=? DNA sequence DT(D2):DA(C14) DG(D3):DC(C13) DC(D4):DG(C12) DG(D5):DC(C11) DC(D6):DG(C10) DG(D7):DC(C9) DA(D8):DT(C8) DA(D9):DT(C7) DG(D10):DC(C6) DC(D11):DG(C5) DC(D12):DG(C4) DG(D13):DC(C3) DA(D14):DT(C2) chainA (159) HIS161 0 0 0 0 0 0 0 0 2 0 0 0 0 (243) ARG256 0 0 0 0 0 0 11 1 0 0 0 0 0 (244) ASN257 0 0 0 0 0 0 5 0 0 0 0 0 0 (288) GLU301 0 0 0 0 0 0 6 11 0 0 0 0 0 (292) TRP305 0 0 0 0 0 0 0 45 0 0 0 0 0 (366) MET379 0 0 0 0 0 0 15 0 0 0 0 0 0 (408) TRP421 0 0 0 0 0 0 5 7 0 0 0 0 0 (416) ARG429 0 0 0 0 0 0 8 3 29 0 0 0 0 (418) TRP431 0 0 0 0 0 44 8 0 0 0 0 0 0 (428) ARG441 0 0 0 0 0 4 0 0 0 0 0 0 0 (437) ARG450 0 2 8 12 0 0 0 0 0 0 0 0 0 prot.sequence mnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvttlsdvletgvkallperallknkdplfepwhfepgekaakkvmesfiadrldsygalRNdptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgymrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkiRymsyegckRKfdvklyiekysaldkla >8oyb_A:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TIME-RESOLVED SFX STRUCTURE OF THE CLASS II PHOTOLYASE COMPLEXED WITH A THYMINE DIMER (30 MICROSECOND PUMP-PROBE DELAY) organism=Methanosarcina mazei Go1 DNA sequence DT(C2):DA(D14) DC(C3):DG(D13) DG(C4):DC(D12) DG(C5):DC(D11) DC(C6):DG(D10) DT(C7):DA(D9) DT(C8):DA(D8) DC(C9):DG(D7) DG(C10):DC(D6) DC(C11):DG(D5) DG(C12):DC(D4) DC(C13):DG(D3) DA(C14):DT(D2) chainA (160) HIS161 0 0 1 1 0 0 0 0 0 0 0 0 0 (246) ARG256 0 0 0 0 0 3 7 0 0 0 0 0 0 (291) GLU301 0 0 0 0 0 11 0 0 0 0 0 0 0 (295) TRP305 0 0 0 0 0 45 0 0 0 0 0 0 0 (369) MET379 0 0 0 0 0 1 0 0 0 0 0 0 0 (411) TRP421 0 0 0 0 0 11 0 0 0 0 0 0 0 (419) ARG429 0 0 0 0 50 9 7 0 0 0 0 0 0 (421) TRP431 0 0 0 0 0 0 4 19 0 0 0 0 0 (431) ARG441 0 0 0 0 0 0 0 2 0 0 0 0 0 (440) ARG450 0 0 0 0 0 0 0 0 0 17 14 8 1 prot.sequence imnpkriralksgkqgdgpvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisgisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpetlsdvletgvkallperallknkdplfepwhfepgekaakkvmesfiadrldsygalRndptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgymrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekysaldklaa >8oyc_B:Cryptochrome/photolyase_FAD-binding_domain;Cryptochrome/photolyase,_N-terminal_domain; title=TIME-RESOLVED SFX STRUCTURE OF THE CLASS II PHOTOLYASE COMPLEXED WITH A THYMINE DIMER (100 MICROSECOND TIMPEOINT) organism=Methanosarcina mazei Go1 DNA sequence DC(E3):DG(F13) DG(E4):DC(F12) DG(E5):DC(F11) DC(E6):DG(F10) DT(E7):DA(F9) DT(E8):DA(F8) DC(E9):DG(F7) DG(E10):DC(F6) DC(E11):DG(F5) DG(E12):DC(F4) DC(E13):DG(F3) DA(E14):DT(F2) chainB (152) HIS161 0 0 0 2 0 0 0 0 0 0 0 0 (217) ARG256 0 0 0 0 3 7 0 0 0 0 0 0 (218) ASN257 0 0 0 0 0 1 0 0 0 0 0 0 (262) GLU301 0 0 0 0 13 1 0 0 0 0 0 0 (266) TRP305 0 0 0 0 34 0 0 0 0 0 0 0 (340) MET379 0 0 0 0 1 0 0 0 0 0 0 0 (382) TRP421 0 0 0 0 8 0 0 0 0 0 0 0 (390) ARG429 0 0 0 16 23 2 0 0 0 0 0 0 (392) TRP431 0 0 0 0 0 5 13 0 0 0 0 0 (402) ARG441 0 0 0 0 0 0 2 0 0 0 0 0 (411) ARG450 0 0 0 0 0 0 0 0 8 9 8 9 prot.sequence mnpkriralkspvvywmsrdqraednwallfsraiakeanvpvvvvfcltdefleagirqyefmlkglqelevslsrkkipsfflrgdpgekisrfvkdynagtlvtdfsplriknqwiekvisisipffevdahnvvpcweasqkheyaaHtfrpklyallpefleefpelepnsvtpenkdplfepwhfepgekaakkvmesfiadrldsygalRNdptknmlsnlspylhfgqissqrvvlevekaesnpgskkafldEiliWkeisdnfcyynpgydgfesfpswakeslnahrndvrshiytleefeagkthdplwnasqmellstgkmhgymrMywakkilewsespekaleiaiclndryeldgrdpngyagiaWsiggvhdRaWgerevtgkiRymsyegckRkfdvklyiekysal >8oz6_AB:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX LIGAND-FREE organism=? DNA sequence DA(J1) DA(J2) DA(J3) DA(J4) DA(J5) DA(J6) DA(J7) DA(J8) DA(J9) DA(J10) DA(J11) DA(J12) DA(J13) DA(J14) DA(J15) DA(J16) chainA (263) ARG263 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) ASN289 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 1 12 0 0 0 chainB (209) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (253) LYS287 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 (294) TYR328 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (401) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsNktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpiRdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykKveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8oz6_CD:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX LIGAND-FREE organism=? DNA sequence DA(L1) DA(L2) DA(L3) DA(L4) DA(L5) DA(L6) DA(L7) DA(L8) DA(L9) DA(L10) DA(L11) DA(L12) DA(L13) DA(L14) DA(L15) DA(L16) chainC (263) ARG263 0 0 0 13 4 0 0 0 0 0 0 0 0 0 0 0 (289) ASN289 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 chainD (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsNktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8oz6_E:Toll/Interleukin_receptor_TIR_domain; title=CRYOEM STRUCTURE OF SPARTA COMPLEX LIGAND-FREE organism=? DNA sequence DA(O1) DA(O2) DA(O3) DA(O4) DA(O5) DA(O6) DA(O7) DA(O8) DA(O9) DA(O10) DA(O11) DA(O12) DA(O13) DA(O14) DA(O15) DA(O16) chainE (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 9 12 0 0 0 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckrlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni >8oz6_EF:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX LIGAND-FREE organism=? DNA sequence DA(O1) DA(O2) DA(O3) DA(O4) DA(O5) DA(O6) DA(O7) DA(O8) DA(O9) DA(O10) DA(O11) DA(O12) DA(O13) DA(O14) DA(O15) DA(O16) chainE (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 9 12 0 0 0 chainF ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckrlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8oz6_GH:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX LIGAND-FREE organism=? DNA sequence DA(P1) DA(P2) DA(P3) DA(P4) DA(P5) DA(P6) DA(P7) DA(P8) DA(P9) DA(P10) DA(P11) DA(P12) DA(P13) DA(P14) DA(P15) DA(P16) chainG (263) ARG263 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 (267) GLN267 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 (289) ASN289 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 11 13 0 0 chainH (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivQllnkafelrmkdkevqeyemsNktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozd_AB:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX DIMER-3 organism=? DNA sequence DA(J1) DA(J2) DA(J3) DA(J4) DA(J5) DA(J6) DA(J7) DA(J8) DA(J9) DA(J10) DA(J11) DA(J12) DA(J13) DA(J14) DA(J15) DA(J16) chainA (263) ARG263 0 0 0 12 2 0 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 3 13 4 0 0 chainB (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozd_B:Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX DIMER-3 organism=? DNA sequence DA(J1) DA(J2) DA(J3) DA(J4) DA(J5) DA(J6) DA(J7) DA(J8) DA(J9) DA(J10) DA(J11) DA(J12) DA(J13) DA(J14) DA(J15) DA(J16) chainB (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 prot.sequence mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozd_CD:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX DIMER-3 organism=? DNA sequence DA(E17) DA(E18) DA(E19) DA(E20) DA(E21) DA(E22) DA(E23) DA(E24) DA(E25) DA(E26) DA(E27) DA(E28) DA(E29) DA(E30) DA(E31) DA(E32) chainC (263) ARG263 0 0 0 9 4 0 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 2 13 3 0 0 chainD (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8oze_EF:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX DIMER HIGH RESOLUTION organism=? DNA sequence DA(P7) DT(P8) DA(P9) DC(P10) DA(P11) DA(P12) DC(P13) DC(P14) DT(P15) DA(P16) DC(P17) DT(P18) DA(P19) DC(P20) DC(P21) DT(P22) DC(P23) chainE ( 96) ARG263 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 (191) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (195) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 chainF ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (253) LYS287 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence eeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykKveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8oze_GH:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX DIMER HIGH RESOLUTION organism=? DNA sequence DA(B7) DT(B8) DA(B9) DC(B10) DA(B11) DA(B12) DC(B13) DC(B14) DT(B15) DA(B16) DC(B17) DT(B18) DA(B19) DC(B20) DC(B21) DT(B22) DC(B23) chainG ( 96) ARG263 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 (191) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 (195) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 chainH ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (253) LYS287 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence eeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykKveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8oze_H:Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX DIMER HIGH RESOLUTION organism=? DNA sequence DA(B7) DT(B8) DA(B9) DC(B10) DA(B11) DA(B12) DC(B13) DC(B14) DT(B15) DA(B16) DC(B17) DT(B18) DA(B19) DC(B20) DC(B21) DT(B22) DC(B23) chainH ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 (253) LYS287 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykKveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozf_A:Toll/Interleukin_receptor_TIR_domain; title=CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-2 organism=? DNA sequence DA(J1) DA(J2) DA(J3) DA(J4) DA(J5) DA(J6) DA(J7) DA(J8) DA(J9) DA(J10) DA(J11) DA(J12) DA(J13) DA(J14) DA(J15) DA(J16) chainA (263) ARG263 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni >8ozf_AB:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-2 organism=? DNA sequence DA(J1) DA(J2) DA(J3) DA(J4) DA(J5) DA(J6) DA(J7) DA(J8) DA(J9) DA(J10) DA(J11) DA(J12) DA(J13) DA(J14) DA(J15) DA(J16) chainA (263) ARG263 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 chainB (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (401) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozf_CE:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-2 organism=? DNA sequence DA(L1) DA(L2) DA(L3) DA(L4) DA(L5) DA(L6) DA(L7) DA(L8) DA(L9) DA(L10) DA(L11) DA(L12) DA(L13) DA(L14) DA(L15) DA(L16) chainC (263) ARG263 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) ASN289 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 chainE (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (401) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsNktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrrrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozf_FG:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-2 organism=? DNA sequence DA(P1) DA(P2) DA(P3) DA(P4) DA(P5) DA(P6) DA(P7) DA(P8) DA(P9) DA(P10) DA(P11) DA(P12) DA(P13) DA(P14) DA(P15) DA(P16) chainF (263) ARG263 0 0 8 11 0 0 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 chainG (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskiegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozf_HM:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-2 organism=? DNA sequence DA(Q1) DA(Q2) DA(Q3) DA(Q4) DA(Q5) DA(Q6) DA(Q7) DA(Q8) DA(Q9) DA(Q10) DA(Q11) DA(Q12) DA(Q13) DA(Q14) DA(Q15) DA(Q16) chainH (263) ARG263 0 0 10 10 0 0 0 0 0 0 0 0 0 0 0 0 (289) ASN289 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 7 13 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 14 5 0 0 chainM (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (401) MET435 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 (437) ILE471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsNktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacIfadgepvtlrfadkigeiltastdiktpplafkyyi >8ozg_AB:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-1 organism=? DNA sequence DA(J1) DA(J2) DA(J3) DA(J4) DA(J5) DA(J6) DA(J7) DA(J8) DA(J9) DA(J10) DA(J11) DA(J12) DA(J13) DA(J14) DA(J15) DA(J16) chainA (263) ARG263 0 0 12 14 0 0 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 chainB (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (401) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozg_CE:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-1 organism=? DNA sequence DA(L1) DA(L2) DA(L3) DA(L4) DA(L5) DA(L6) DA(L7) DA(L8) DA(L9) DA(L10) DA(L11) DA(L12) DA(L13) DA(L14) DA(L15) DA(L16) chainC (263) ARG263 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 chainE (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 (218) LEU252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 (253) LYS287 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (401) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHLawtistaafykaggkpwklsdvrngvcylglvykKveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozg_FG:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-1 organism=? DNA sequence DA(P1) DA(P2) DA(P3) DA(P4) DA(P5) DA(P6) DA(P7) DA(P8) DA(P9) DA(P10) DA(P11) DA(P12) DA(P13) DA(P14) DA(P15) DA(P16) chainF (263) ARG263 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainG ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozg_G:Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-1 organism=? DNA sequence DA(P1) DA(P2) DA(P3) DA(P4) DA(P5) DA(P6) DA(P7) DA(P8) DA(P9) DA(P10) DA(P11) DA(P12) DA(P13) DA(P14) DA(P15) DA(P16) chainG ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 prot.sequence mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozg_HM:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-1 organism=? DNA sequence DA(Q1) DA(Q2) DA(Q3) DA(Q4) DA(Q5) DA(Q6) DA(Q7) DA(Q8) DA(Q9) DA(Q10) DA(Q11) DA(Q12) DA(Q13) DA(Q14) DA(Q15) DA(Q16) chainH (263) ARG263 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 2 13 0 0 0 chainM (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (401) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozi_AB:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX PRE-NAD CLEAVAGE organism=? DNA sequence DA(J1) DA(J2) DA(J3) DA(J4) DA(J5) DA(J6) DA(J7) DA(J8) DA(J9) DA(J10) DA(J11) DA(J12) DA(J13) DA(J14) DA(J15) DA(J16) chainA (263) ARG263 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 chainB (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozi_CD:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX PRE-NAD CLEAVAGE organism=? DNA sequence DA(L1) DA(L2) DA(L3) DA(L4) DA(L5) DA(L6) DA(L7) DA(L8) DA(L9) DA(L10) DA(L11) DA(L12) DA(L13) DA(L14) DA(L15) DA(L16) chainC (263) ARG263 0 0 12 2 0 0 0 0 0 0 0 0 0 0 0 0 (289) ASN289 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 chainD ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 (401) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsNktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozi_E:Toll/Interleukin_receptor_TIR_domain; title=CRYOEM STRUCTURE OF SPARTA COMPLEX PRE-NAD CLEAVAGE organism=? DNA sequence DA(O1) DA(O2) DA(O3) DA(O4) DA(O5) DA(O6) DA(O7) DA(O8) DA(O9) DA(O10) DA(O11) DA(O12) DA(O13) DA(O14) DA(O15) DA(O16) chainE (263) ARG263 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni >8ozi_EF:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX PRE-NAD CLEAVAGE organism=? DNA sequence DA(O1) DA(O2) DA(O3) DA(O4) DA(O5) DA(O6) DA(O7) DA(O8) DA(O9) DA(O10) DA(O11) DA(O12) DA(O13) DA(O14) DA(O15) DA(O16) chainE (263) ARG263 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 chainF ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 (221) THR255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawTistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8ozi_GH:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=CRYOEM STRUCTURE OF SPARTA COMPLEX PRE-NAD CLEAVAGE organism=? DNA sequence DA(P1) DA(P2) DA(P3) DA(P4) DA(P5) DA(P6) DA(P7) DA(P8) DA(P9) DA(P10) DA(P11) DA(P12) DA(P13) DA(P14) DA(P15) DA(P16) chainG (263) ARG263 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 (267) GLN267 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (289) ASN289 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (358) HIS358 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 (362) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 chainH ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (211) PHE245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 (214) ILE248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 (217) HIS251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 prot.sequence mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivQllnkafelrmkdkevqeyemsNktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8p4a_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURAL INSIGHTS INTO HUMAN CO-TRANSCRIPTIONAL CAPPING - STRUCTURE 1 organism=? DNA sequence DA(T4):DT(N45) DA(T5):DT(N44) DG(T6):DC(N43) DC(T7):DG(N42) DT(T8):DA(N41) DT(T9):DA(N40) DT(T10):DA(N39) DA(T11):DT(N38) DT(T12):DA(N37) DT(T13):DA(N36) DG(T14):DC(N35) DA(T15):DT(N34) DG(T16):DC(N33) DG(T17):DC(N32) DC(T18):DG(N31) DT(T19):DA(N30) DT(T20):DA(N29) DA(T21):DT(N28) DA(T22):DT(N27) DG(T23):DC(N26) DC(T24):DG(N25) DA(T25):DA(N24) DG(T26):DT(N14) DT(T27):DC(N13) DG(T28):DA(N11) DG(T29):DT(N10) DG(T30):DG(N9) DT(T31):DA(N8) chainA (232) LYS285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (311) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (409) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (447) GLU500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (801) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (1336) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 (1337) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavrnqddlthkladivKinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdEmnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip >8p4a_ABE: title=STRUCTURAL INSIGHTS INTO HUMAN CO-TRANSCRIPTIONAL CAPPING - STRUCTURE 1 organism=? DNA sequence DA(T4):DT(N45) DA(T5):DT(N44) DG(T6):DC(N43) DC(T7):DG(N42) DT(T8):DA(N41) DT(T9):DA(N40) DT(T10):DA(N39) DA(T11):DT(N38) DT(T12):DA(N37) DT(T13):DA(N36) DG(T14):DC(N35) DA(T15):DT(N34) DG(T16):DC(N33) DG(T17):DC(N32) DC(T18):DG(N31) DT(T19):DA(N30) DT(T20):DA(N29) DA(T21):DT(N28) DA(T22):DT(N27) DG(T23):DC(N26) DC(T24):DG(N25) DA(T25):DA(N24) DG(T26):DT(N14) DT(T27):DC(N13) DG(T28):DA(N11) DG(T29):DT(N10) DG(T30):DG(N9) DT(T31):DA(N8) chainA (232) LYS285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (311) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (409) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (447) GLU500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (801) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 (1336) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 (1337) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainB (440) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (442) LYS494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 (1018) GLU1076 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 chainE prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavrnqddlthkladivKinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdEmnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqppryllkfeqiylskpthwdgapspmmpnearlrnltysaplyvditktvqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdaragvsqvlnrltfastlshlrrlnspigrDgKlakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmEgrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8p4b_ABE: title=STRUCTURAL INSIGHTS INTO HUMAN CO-TRANSCRIPTIONAL CAPPING - STRUCTURE 2 organism=? DNA sequence DC(T6):DG(N43) DA(T7):DT(N42) DG(T8):DC(N41) DC(T9):DG(N40) DT(T10):DA(N39) DC(T11):DG(N38) DC(T12):DG(N37) DC(T13):DG(N36) DT(T14):DA(N35) DG(T15):DC(N34) DC(T16):DG(N33) DT(T17):DA(N32) DG(T18):DC(N31) DG(T19):DC(N30) DC(T20):DG(N29) DT(T21):DA(N28) DC(T22):DG(N27) DC(T23):DG(N26) DG(T24):DC(N14) DA(T25):DG(N13) chainA (412) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 (804) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 (805) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 (1339) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 chainB chainE prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqrnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlaraigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriIsdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskgfdqeevfekpTRetcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8p4c_A:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURAL INSIGHTS INTO HUMAN CO-TRANSCRIPTIONAL CAPPING - STRUCTURE 3 organism=? DNA sequence DC(T3):DG(N46) DA(T4):DT(N45) DA(T5):DT(N44) DG(T6):DC(N43) DC(T7):DG(N42) DT(T8):DA(N41) DT(T9):DA(N40) DT(T10):DA(N39) DA(T11):DT(N38) DT(T12):DA(N37) DT(T13):DA(N36) DG(T14):DC(N35) DA(T15):DT(N34) DG(T16):DC(N33) DG(T17):DC(N32) DC(T18):DG(N31) DT(T19):DA(N30) DT(T20):DA(N29) DA(T21):DT(N28) DA(T22):DT(N27) DG(T23):DC(N26) DC(T24):DG(N25) DA(T25):DA(N24) DG(T26):DT(N14) DT(T27):DC(N13) DG(T28):DC(N12) DG(T29):DA(N11) DG(T30):DT(N10) DT(T31):DG(N9) DT(T32):DA(N8) DC(T33):DT(N7) DC(T34):DC(N6) chainA (220) GLN267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (804) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 (805) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (1339) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (1340) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmQrnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip >8p4c_ABE: title=STRUCTURAL INSIGHTS INTO HUMAN CO-TRANSCRIPTIONAL CAPPING - STRUCTURE 3 organism=? DNA sequence DC(T3):DG(N46) DA(T4):DT(N45) DA(T5):DT(N44) DG(T6):DC(N43) DC(T7):DG(N42) DT(T8):DA(N41) DT(T9):DA(N40) DT(T10):DA(N39) DA(T11):DT(N38) DT(T12):DA(N37) DT(T13):DA(N36) DG(T14):DC(N35) DA(T15):DT(N34) DG(T16):DC(N33) DG(T17):DC(N32) DC(T18):DG(N31) DT(T19):DA(N30) DT(T20):DA(N29) DA(T21):DT(N28) DA(T22):DT(N27) DG(T23):DC(N26) DC(T24):DG(N25) DA(T25):DA(N24) DG(T26):DT(N14) DT(T27):DC(N13) DG(T28):DC(N12) DG(T29):DA(N11) DG(T30):DT(N10) DT(T31):DG(N9) DT(T32):DA(N8) DC(T33):DT(N7) DC(T34):DC(N6) chainA (220) GLN267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 (804) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 (805) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (1339) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (1340) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (464) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (794) PHE823 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 chainE prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmQrnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlaraigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrDgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskgFdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8p4d_ABE: title=STRUCTURAL INSIGHTS INTO HUMAN CO-TRANSCRIPTIONAL CAPPING - STRUCTURE 4 organism=? DNA sequence DC(N6):DC(T34) DT(N7):DC(T33) DA(N8):DT(T32) DG(N9):DT(T31) DT(N10):DG(T30) DA(N11):DG(T29) DC(N12):DG(T28) DC(N13):DT(T27) DT(N14):DG(T26) DA(N24):DA(T25) DG(N25):DC(T24) DC(N26):DG(T23) DT(N27):DA(T22) DT(N28):DA(T21) DA(N29):DT(T20) DA(N30):DT(T19) DG(N31):DC(T18) DC(N32):DG(T17) DC(N33):DG(T16) DT(N34):DA(T15) DC(N35):DG(T14) DA(N36):DT(T13) DA(N37):DT(T12) DT(N38):DA(T11) DA(N39):DT(T10) DA(N40):DT(T9) DA(N41):DT(T8) DG(N42):DC(T7) DC(N43):DG(T6) DT(N44):DA(T5) DT(N45):DA(T4) DG(N46):DC(T3) chainA (220) GLN267 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (804) THR854 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (805) ALA855 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1339) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1340) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (464) ASP492 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (794) PHE823 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmQrnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlaraigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrDgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskgFdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8p4e_ABE: title=STRUCTURAL INSIGHTS INTO HUMAN CO-TRANSCRIPTIONAL CAPPING - STRUCTURE 5 organism=? DNA sequence DA(N7):DC(T28) DC(N8):DT(T27) DT(N9):DG(T26) DA(N10):DG(T25) DG(N11):DT(T24) DT(N12):DC(T23) DA(N13):DC(T22) DT(N14):DG(T21) DG(N24):DA(T20) DA(N25):DA(T19) DA(N26):DT(T18) DA(N27):DT(T17) DG(N28):DC(T16) DT(N29):DA(T15) DA(N30):DT(T14) DC(N31):DG(T13) DT(N32):DA(T12) DT(N33):DA(T11) DG(N34):DC(T10) DA(N35):DT(T9) DG(N36):DC(T8) DC(N37):DG(T7) DT(N38):DA(T6) DT(N39):DA(T5) DG(N40):DC(T4) DA(N41):DT(T3) chainA (139) LYS149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 (276) MET329 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (278) LYS331 0 0 0 0 0 0 12 74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (311) ARG364 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (408) GLN461 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (409) PRO462 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (801) THR854 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (802) ALA855 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1336) ARG1416 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (165) MET200 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ARG222 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (339) ARG385 0 0 0 0 0 0 0 0 22 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (340) ASP386 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (437) ILE489 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) LYS497 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) PRO498 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1031) MET1089 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlcKgknggcgryqprirrsglelyaewkkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavrnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpraMqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmndddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqppryllkfeqiylskpthwdgapspmmpnearlrnltysaplyvditktvqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekMatntvyvfakkdskyaytgecRsclenssrptstiwvsmlarqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddRDhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdaragvsqvlnrltfastlshlrrlnspIgrdgklaKPrqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgeMerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklRenqlpriqagdpvaryfgikrGqvvkiirpsetagryityrlvq >8p4f_ABEZ:Translation_proteins_SH3-like_domain; title=STRUCTURAL INSIGHTS INTO HUMAN CO-TRANSCRIPTIONAL CAPPING - STRUCTURE 6 organism=? DNA sequence DA(N4):DT(T40) DG(N5):DC(T39) DT(N6):DA(T38) DA(N7):DT(T37) DC(N8):DG(T36) DT(N9):DA(T35) DA(N10):DT(T34) DG(N11):DC(T33) DT(N12):DA(T32) DA(N13):DT(T31) DT(N14):DA(T30) DT(N15):DT(T29) DC(N16):DC(T28) DT(N17):DT(T27) DA(N18):DG(T26) DG(N19):DG(T25) DT(N20):DT(T24) DA(N21):DC(T23) DT(N22):DC(T22) DT(N23):DG(T21) DG(N24):DA(T20) DA(N25):DA(T19) DA(N26):DT(T18) DA(N27):DT(T17) DG(N28):DC(T16) DT(N29):DA(T15) DA(N30):DT(T14) DC(N31):DG(T13) DT(N32):DA(T12) DT(N33):DA(T11) DG(N34):DC(T10) DA(N35):DT(T9) DG(N36):DC(T8) DC(N37):DG(T7) DT(N38):DA(T6) DT(N39):DA(T5) DG(N40):DC(T4) DA(N41):DT(T3) chainA (139) LYS149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 (287) LYS331 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (320) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (417) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (418) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (810) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (811) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (173) MET200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) ASP386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (364) LYS391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (462) ILE489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (465) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) PRO498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainZ prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlcKgknicehggcgryqprirrsglelyaewkkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitrhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekMatntvyvfakkdskyaytgecRsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddRDhygnKrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspIgrDgklakPrqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedelegtnrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriQagdpvaryfgikrgqvvkiirPsetagryityrlvq/dpnlwtvkckigeerataislmrkfiayqftdtplqiksvvapehvkgyiyveaykqthvkqaiegvgnlrlgywnqqmvpikemtdvlkvvkevanlkpkswvrlkrgiykddiaqvdyvepsqntislkmipridydrikappqrlfdaekirslggdvasdgdflifegNrysrkgflfksfamsavitegVkptlselekfrehnfqpgdnvevcegelinlqgkilsvdgnkitimpkhedlkdmlefpaqelrkyfkmgdhvkviagrfegdtglivrveenfvilfsdltmhelkvlprdlqlcsetasgvdvggqhewgelvqldpqtvgvivrleretfqvlnmygkvVTvrhqAvtrkkdnrfavaldseqnnihvkdivkvidgphsgregeirhlfrsfaflhckklvenggmfvcktrhlvlaneligqtvrisqgpykgyigvvkdaTesTarvelHstcqtisvdrqrlttvg >8p4f_B:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=STRUCTURAL INSIGHTS INTO HUMAN CO-TRANSCRIPTIONAL CAPPING - STRUCTURE 6 organism=? DNA sequence DA(N4):DT(T40) DG(N5):DC(T39) DT(N6):DA(T38) DA(N7):DT(T37) DC(N8):DG(T36) DT(N9):DA(T35) DA(N10):DT(T34) DG(N11):DC(T33) DT(N12):DA(T32) DA(N13):DT(T31) DT(N14):DA(T30) DT(N15):DT(T29) DC(N16):DC(T28) DT(N17):DT(T27) DA(N18):DG(T26) DG(N19):DG(T25) DT(N20):DT(T24) DA(N21):DC(T23) DT(N22):DC(T22) DT(N23):DG(T21) DG(N24):DA(T20) DA(N25):DA(T19) DA(N26):DT(T18) DA(N27):DT(T17) DG(N28):DC(T16) DT(N29):DA(T15) DA(N30):DT(T14) DC(N31):DG(T13) DT(N32):DA(T12) DT(N33):DA(T11) DG(N34):DC(T10) DA(N35):DT(T9) DG(N36):DC(T8) DC(N37):DG(T7) DT(N38):DA(T6) DT(N39):DA(T5) DG(N40):DC(T4) DA(N41):DT(T3) chainB (173) MET200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) ARG222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (358) ARG385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (359) ASP386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (364) LYS391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (462) ILE489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (465) ASP492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (471) PRO498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekMatntvyvfakkdskyaytgecRsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddRDhygnKrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspIgrDgklakPrqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenedelegtnrrytkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv >8pbc_E:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=RAD51 FILAMENT ON SSDNA BOUND BY THE BRCA2 C-TERMINUS organism=? DNA sequence DG(V1) DG(V2) DA(V3) DG(V4) DG(V5) DA(V6) DG(V7) DG(V8) DA(V9) DG(V10) DG(V11) DA(V12) DG(V13) DG(V14) DA(V15) DG(V16) DG(V17) DA(V18) DG(V19) DG(V20) DA(V21) DG(V22) DG(V23) DA(V24) DG(V25) DG(V26) DA(V27) DG(V28) DG(V29) DA(V30) chainE (215) ARG235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) LEU238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) SER239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) VAL270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 (251) ALA271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (253) VAL273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 (257) LYS285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gpqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvVAqVdpkKpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgdakd >8pbd_B:P-loop_containing_nucleoside_triphosphate_hydrolases;Rad51_N-terminal_domain-like; title=RAD51 FILAMENT ON DSDNA BOUND BY THE BRCA2 C-TERMINUS organism=? DNA sequence DT(U1):DA(T27) DC(U2):DG(T26) DC(U3):DG(T25) DT(U4):DA(T24) DC(U5):DG(T23) DC(U6):DG(T22) DT(U7):DA(T21) DC(U8):DG(T20) DC(U9):DG(T19) DT(U10):DA(T18) DC(U11):DG(T17) DC(U12):DG(T16) DT(U13):DA(T15) DC(U14):DG(T14) DC(U15):DG(T13) DT(U16):DA(T12) DC(U17):DG(T11) DC(U18):DG(T10) DT(U19):DA(T9) DC(U20):DG(T8) DC(U21):DG(T7) DT(U22):DA(T6) DC(U23):DG(T5) DC(U24):DG(T4) DT(U25):DA(T3) DC(U26):DG(T2) DC(U27):DG(T1) chainB (215) ARG235 0 0 0 0 0 60 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) LEU238 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) SER239 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) VAL270 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (251) ALA271 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (253) VAL273 0 0 28 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (254) ASP274 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gpqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvVAqVDpkkpiggniiahasttrlylrkgrgetrickiydspclpeaeamfainadgvgdakd >8pbl_FG: title=E. COLI RNA POLYMERASE ELONGATION COMPLEX STALLED AT THYMINE DIMER LESION organism=? DNA sequence DA(A3):DT(B28) DA(A4):DT(B27) DT(A5):DA(B26) DC(A6):DG(B25) DG(A7):DC(B24) DA(A8):DT(B23) DG(A9):DC(B22) DC(A10):DG(B21) DT(A12):DC(B20) DG(A13):DA(B19) DT(A14):DC(B18) DG(A15):DA(B17) DA(A16):DC(B16) DA(A17):TTD(B14) DT(A18):DA(B13) DG(A19):DC(B12) DG(A20):DC(B11) DC(A21):DG(B10) DG(A22):DC(B9) DC(A23):DG(B8) DC(A24):DG(B7) DG(A25):DC(B6) DA(A26):DT(B5) DC(A27):DG(B4) DG(A28):DC(B3) DA(A29):DT(B2) DA(A30):DT(B1) chainF (174) ARG175 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (176) ILE177 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (181) SER182 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (182) TRP183 0 0 0 0 0 0 0 0 0 0 0 0 36 10 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ASP199 0 0 0 0 0 0 0 0 0 0 2 15 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG201 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (370) ARG371 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (541) ARG542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0 0 0 0 0 0 0 0 0 0 (1250) MET1273 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG (240) LEU255 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (244) ARG259 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (256) ARG271 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (260) ARG275 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ILE316 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (319) LYS334 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) ARG339 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vysytekkrirkdfgkrpqvldvpyllsiqldsfqkfieqdpegqygleaafrsvfpiqsysgnselqyvsyrlgepvfdvqecqirgvtysaplrvklrlviyereapegtvkdikeqevymgeiplmtdngtfvingtervivsqlhrspgvffdsdkgkthssgkvlynaRiIpyrgSWldfefdpkdnlfvriDrRrklpatiilralnytteqildlffekvifeirdnklqmelvperlrgetasfdieangkvyvekgrritarhirqlekddvklievpveyiagkvvakdyidestgelicaanmelsldllaklsqsghkrietlftndldhgpyisetlrvdptndrlsalveiyrmmRpgepptreaaeslfenlffsedrydlsavgrmkfnrsllreeiegsgilskddiidvmkklidirngkgevddidhlgnrrirsvgemaenqfrvglvrveravkerlslgdldtlmpqdminakpisaavkeffgssqlsqfmdqnnplseithkrrisalgpggltreRagfevrdvhpthygrvcpietpegpniglinslsvyaqtneygfletpyrkvtdgvvtdeihylsaieegnyviaqansnldeeghfvedlvtcrskgesslfsrdqvdymdvstqqvvsvgaslipflehddanralmganmqrqavptlradkplvgtgmeravavdsgvtavakrggvvqyvdasrivikvnedemypgeagidiynltkytrsnqntcinqmpcvslgepvergdvladgpstdlgelalgqnmrvafmpwngynfedsilvservvqedrfttihiqelacvsrdtklgpeeitadipnvgeaalskldesgivyigaevtggdilvgkvtpkvkdsslrvpngvsgtvidvqvftrdgvekdkraleieemqlkqakkdlseelqileaglfsriravlvaggveaekldklprdrwlelgltdeekqnqleqlaeqydelkhefekkleakrrkitqgddlapgvlkivkvylavkrriqpgdkmagrhgnkgviskinpiedmpydengtpvdivlnplgvpsrmnigqilethlgmaakgigdkinamlkqqqevaklrefiqraydlgadvrqkvdlstfsdeevmrlaenlrkgmpiatpvfdgakeaeikellklgdlptsgqirlydgrtgeqferpvtvgymymlklnhlvddkmharstgsyslvtqqplggkaqfggqrfgemevwaleaygaaytlqemltvksddvngrtkmyknivdgnhqmepgmpesfnvllkeirslginielede/efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggRfatsdlndlyrRvinRnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaItgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8pbl_G:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=E. COLI RNA POLYMERASE ELONGATION COMPLEX STALLED AT THYMINE DIMER LESION organism=? DNA sequence DT(B1):DA(A30) DT(B2):DA(A29) DC(B3):DG(A28) DG(B4):DC(A27) DT(B5):DA(A26) DC(B6):DG(A25) DG(B7):DC(A24) DG(B8):DC(A23) DC(B9):DG(A22) DG(B10):DC(A21) DC(B11):DG(A20) DC(B12):DG(A19) DA(B13):DT(A18) TTD(B14):DA(A17) DC(B16):DA(A16) DA(B17):DG(A15) DC(B18):DT(A14) DA(B19):DG(A13) DC(B20):DT(A12) DG(B21):DC(A10) DC(B22):DG(A9) DT(B23):DA(A8) DC(B24):DG(A7) DG(B25):DC(A6) DA(B26):DT(A5) DT(B27):DA(A4) DT(B28):DA(A3) chainG (240) LEU255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 (244) ARG259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (256) ARG271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 0 0 (260) ARG275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 (299) ARG314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 (301) ILE316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (319) LYS334 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (324) ARG339 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (337) ARG352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (411) ALA426 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (412) PRO427 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 (775) THR790 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 (776) ALA791 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence efdaikialaspdmirswsfgevkkpetinyrtfkperdglfcarifgpvkdyeclcgkykrlkhrgvicekcgvevtqtkvrrermghielasptahiwflkslpsrigllldmplrdiervlyfesyvvieggmtnlerqqilteeqyldaleefgdefdakmgaeaiqallksmdleqeceqlreelnetnsetkrkkltkriklleafvqsgnkpewmiltvlpvlppdlrplvpLdggRfatsdlndlyrRvinRnnrlkrlldlaapdiivrnekrmlqeavdalldngrrgRaItgsnkrplksladmikgkqgrfrqnllgkrvdysgRsvitvgpylrlhqcglpkkmalelfkpfiygklelrglattikaakkmvereeavvwdildevirehpvllnraptlhrlgiqafepvliegkaiqlhplvcaaynadfdgdqmavhvpltleaqlearalmmstnnilspangepiivpsqdvvlglyymtrdcvnakgegmvltgpkeaerlyrsglaslharvkvriteyekdangelvaktslkdttvgrailwmivpkglpysivnqalgkkaiskmlntcyrilglkptvifadqimytgfayaarsgasvgiddmvipekkheiiseaeaevaeiqeqfqsglvtagerynkvidiwaaandrvskammdnlqtetvinrdgqeekqvsfnsiymmadsgargsaaqirqlagmrglmakpdgsiietpitanfreglnvlqyfisthgarkgladtalktansgyltrrlvdvaqdlvvteddcgthegimmtpvieggdvkeplrdrvlgrvtaedvlkpgtadilvprntllheqwcdlleensvdavkvrsvvscdtdfgvcahcygrdlarghiinkgeaigviaaqsigepgtqltmssiqvknkgsiklsnvksvvnssgklvitsrntelklidefgrtkesykvpygavlakgdgeqvaggetvanwdphtmpvitevsgfvrftdmidgqtitrqtdeltglsslvvldsaertaggkdlrpalkivdaqgndvlipgtdmpaqyflpgkaivqledgvqissgdtlaripqgglprvadlfearrpkepailaeisgivsfgketkgkrrlvitpdpyeemipkwrqlnvfegervergdvisdgpeaphdilrlrgvhavtryivnevqdvyrlqgvkindkhievivrqmlrkativnagssdflegeqveysrvkianreleangkvgatysrdllgitkaslatesfisaasfqettrvlteaavagkrdelrglkenvivgrlipagtgyayhqdrmrrr >8peo_A:Histone-fold; title=H3K36ME2 NUCLEOSOME-LEDGF/P75 PWWP DOMAIN COMPLEX organism=? DNA sequence DA(J-73):DT(I73) DT(J-72):DA(I72) DC(J-71):DG(I71) DG(J-70):DC(I70) DG(J-69):DC(I69) DA(J-68):DT(I68) DT(J-67):DA(I67) DG(J-66):DC(I66) DT(J-65):DA(I65) DA(J-64):DT(I64) DT(J-63):DA(I63) DA(J-62):DT(I62) DT(J-61):DA(I61) DA(J-60):DT(I60) DT(J-59):DA(I59) DC(J-58):DG(I58) DT(J-57):DA(I57) DG(J-56):DC(I56) DA(J-55):DT(I55) DC(J-54):DG(I54) DA(J-53):DT(I53) DC(J-52):DG(I52) DG(J-51):DC(I51) DT(J-50):DA(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DC(J-47):DG(I47) DT(J-46):DA(I46) DG(J-45):DC(I45) DG(J-44):DC(I44) DA(J-43):DT(I43) DG(J-42):DC(I42) DA(J-41):DT(I41) DC(J-40):DG(I40) DT(J-39):DA(I39) DA(J-38):DT(I38) DG(J-37):DC(I37) DG(J-36):DC(I36) DG(J-35):DC(I35) DA(J-34):DT(I34) DG(J-33):DC(I33) DT(J-32):DA(I32) DA(J-31):DT(I31) DA(J-30):DT(I30) DT(J-29):DA(I29) DC(J-28):DG(I28) DC(J-27):DG(I27) DC(J-26):DG(I26) DC(J-25):DG(I25) DT(J-24):DA(I24) DT(J-23):DA(I23) DG(J-22):DC(I22) DG(J-21):DC(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DG(J-18):DC(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DA(J-12):DT(I12) DC(J-11):DG(I11) DG(J-10):DC(I10) DC(J-9):DG(I9) DG(J-8):DC(I8) DG(J-7):DC(I7) DG(J-6):DC(I6) DG(J-5):DC(I5) DG(J-4):DC(I4) DA(J-3):DT(I3) DC(J-2):DG(I2) DA(J-1):DT(I1) DG(J0):DC(I0) DC(J1):DG(I-1) DG(J2):DC(I-2) DC(J3):DG(I-3) DG(J4):DC(I-4) DT(J5):DA(I-5) DA(J6):DT(I-6) DC(J7):DG(I-7) DG(J8):DC(I-8) DT(J9):DA(I-9) DG(J10):DC(I-10) DC(J11):DG(I-11) DG(J12):DC(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DG(J18):DC(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DG(J21):DC(I-21) DT(J22):DA(I-22) DG(J23):DC(I-23) DC(J24):DG(I-24) DT(J25):DA(I-25) DA(J26):DT(I-26) DG(J27):DC(I-27) DA(J28):DT(I-28) DG(J29):DC(I-29) DC(J30):DG(I-30) DT(J31):DA(I-31) DG(J32):DC(I-32) DT(J33):DA(I-33) DC(J34):DG(I-34) DT(J35):DA(I-35) DA(J36):DT(I-36) DC(J37):DG(I-37) DG(J38):DC(I-38) DA(J39):DT(I-39) DC(J40):DG(I-40) DC(J41):DG(I-41) DA(J42):DT(I-42) DA(J43):DT(I-43) DT(J44):DA(I-44) DT(J45):DA(I-45) DG(J46):DC(I-46) DA(J47):DT(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DG(J50):DC(I-50) DG(J51):DC(I-51) DC(J52):DG(I-52) DC(J53):DG(I-53) DT(J54):DA(I-54) DC(J55):DG(I-55) DG(J56):DC(I-56) DG(J57):DC(I-57) DC(J58):DG(I-58) DA(J59):DT(I-59) DC(J60):DG(I-60) DC(J61):DG(I-61) DG(J62):DC(I-62) DG(J63):DC(I-63) DG(J64):DC(I-64) DA(J65):DT(I-65) DT(J66):DA(I-66) DT(J67):DA(I-67) DC(J68):DG(I-68) DT(J69):DA(I-69) DC(J70):DG(I-70) DG(J71):DC(I-71) DA(J72):DT(I-72) DT(J73):DA(I-73) chainA ( 5) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence vkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlaaihakrvtimpkdiqlarrirger >8pop_A: title=HK97 SMALL TERMINASE IN COMPLEX WITH DNA organism=Escherichia phage HK97 DNA sequence DT(K10):DA(J37) DA(K11):DT(J36) DA(K12):DT(J35) DC(K13):DG(J34) DG(K14):DC(J33) DC(K15):DG(J32) DT(K16):DA(J31) DA(K17):DT(J30) DA(K18):DT(J29) DC(K19):DG(J28) DC(K20):DG(J27) DC(K21):DG(J26) DG(K22):DC(J25) DA(K23):DT(J24) DT(K24):DA(J23) DT(K25):DA(J22) DT(K26):DA(J21) DT(K27):DA(J20) DT(K28):DA(J19) DT(K29):DA(J18) DT(K30):DA(J17) DA(K31):DT(J16) DG(K32):DC(J15) DT(K33):DA(J14) DT(K34):DA(J13) DT(K35):DA(J12) DT(K36):DA(J11) DA(K37):DT(J10) chainA ( 2) LYS4 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG7 0 0 0 0 0 12 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dKriRsdssaaavqamknaavdtidppshaglekkaepfwhdnirskaldswtpadllaavelannqlyitvlrkdlrkeerirgeerdeglikdlrkqivelqrtilaqrrdlqihshatn >8pop_ABCDEF: title=HK97 SMALL TERMINASE IN COMPLEX WITH DNA organism=Escherichia phage HK97 DNA sequence DT(K10):DA(J37) DA(K11):DT(J36) DA(K12):DT(J35) DC(K13):DG(J34) DG(K14):DC(J33) DC(K15):DG(J32) DT(K16):DA(J31) DA(K17):DT(J30) DA(K18):DT(J29) DC(K19):DG(J28) DC(K20):DG(J27) DC(K21):DG(J26) DG(K22):DC(J25) DA(K23):DT(J24) DT(K24):DA(J23) DT(K25):DA(J22) DT(K26):DA(J21) DT(K27):DA(J20) DT(K28):DA(J19) DT(K29):DA(J18) DT(K30):DA(J17) DA(K31):DT(J16) DG(K32):DC(J15) DT(K33):DA(J14) DT(K34):DA(J13) DT(K35):DA(J12) DT(K36):DA(J11) DA(K37):DT(J10) chainA ( 2) LYS4 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG7 0 0 0 0 0 12 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB (103) GLU126 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (105) ARG128 0 0 0 0 0 0 0 0 0 0 2 13 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (106) ASP129 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD chainE chainF prot.sequence dKriRsdssaaavqamknaavdtidppshaglekkaepfwhdnirskaldswtpadllaavelannqlyitvlrkdlrkeerirgeerdeglikdlrkqivelqrtilaqrrdlqihshatn/dtidppshaglekkaepfwhdnirskaldswtpadllaavelannqlyitvlrkdlrkeerirgeerdeglikdlrkqivelqrtilaqrrdlqihshatngEsRDqkkrnqndrdarntkn/dtidppshaglekkaepfwhdnirskaldswtpadllaavelannqlyitvlrkdlrkeerirgeerdeglikdlrkqivelqrtilaqrrdlqihshatn/dtidppshaglekkaepfwhdnirskaldswtpadllaavelannqlyitvlrkdlrkeerirgeerdeglikdlrkqivelqrtilaqrrdlqihshatn/dtidppshaglekkaepfwhdnirskaldswtpadllaavelannqlyitvlrkdlrkeerirgeerdeglikdlrkqivelqrtilaqrrdlqihshatn/vdtidppshaglekkaepfwhdnirskaldswtpadllaavelannqlyitvlrkdlrkeerirgeerdeglikdlrkqivelqrtilaqrrdlqihshatn >8q63_A:DNA/RNA_polymerases; title=CRYO-EM STRUCTURE OF IC8', A SECOND STATE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH 8-MER RNA, PPPGPGPUPAPAPAPUPG organism=? DNA sequence DA(N107):DT(T40) DG(N108):DC(T39) DT(N109):DA(T38) DA(N110):DT(T37) DT(N111):DA(T36) DT(N112):DA(T35) DG(N113):DC(T34) DA(N114):DT(T33) DT(N115):DA(T32) DA(N116):DT(T31) DT(N117):DA(T30) DA(N118):DA(T29) DA(N119):DC(T28) DG(N120):DA(T27) DT(N121):DG(T26) DA(N122):DC(T25) DA(N123):DC(T24) DT(N124):DA(T23) DA(N125):DT(T22) DA(N126):DT(T21) DA(N127):DT(T20) DT(N128):DA(T19) DG(N129):DC(T18) DC(N130):DG(T17) DA(N131):DT(T16) DA(N132):DT(T15) DA(N133):DT(T14) DT(N134):DA(T13) DT(N135):DA(T12) DG(N136):DC(T11) DC(N137):DG(T10) chainA (135) ASN520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) ARG530 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (144) ALA532 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) ARG533 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) ILE536 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) GLN594 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (217) TYR640 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) HIS641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ASN642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) SER644 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) LYS645 0 0 0 0 0 0 0 0 3 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (371) SER798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (375) ASP802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (400) ARG827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 (404) TYR831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (595) TYR1022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (597) VAL1024 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 (598) THR1025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 (599) TYR1026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (600) VAL1027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 (605) GLN1032 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 (702) GLN1129 0 0 0 0 0 0 0 0 7 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (711) PHE1138 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (712) ILE1139 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (713) SER1140 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (724) ARG1151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 2 1 0 0 0 0 (736) HIS1163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (810) LYS1237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 prot.sequence inffeiynslptleekkafesalnifnqdrqkvlenrateaarerwkhdfeeakargdisieknlnvklwkwynemlplvkeeinhcrsllseklsdkkglnkvdtnrlgygpyltlidpgkmcvitilellklNstgegmRtARavIsvgkaiemefrseqvlkkilwpQsirarigsvlismliqvakvsvqgvdpvtkakvhgeapafahgyqYHNgSKlgvlkihktlirqlngerliasvqpqllpmlvepkpwvnwrsggyhytqstllrtkdspeqvaylkaasdngdidrvydglnvlgrtpwtvnrkvfdvvsqvwnkgegfldipgaqdemvlppapppsilrawklqvktiankfssdrSnrcDtnykleiaraflgeklyfphnldfRgraYplsphfnhlgndmsrgllifwhgkklgpsglkwlkihlsnlfgfdklplkdrvafteshlqdikdsaenpltgdrwwttadkpwqalatcfelnevmkmdnpeefishqpvhqdgtcnglqhyaalggdvegatqvnlvpsdkpqdvyahvarlvqkrleiaaekgdenakilkdkitrkvvkqtvmtnvYgVTYVgatfQiakqlspifddrkesldfskyltkhvfsairelfhsahliqdwlgesakrisksirldvdeksfkngnkpdfmssviwttplglpivqpyreeskkQvetnlqtvFISdpfavnpvnaRrqkaglppnfiHsldashmllsaaecgkqgldfasvhdsywthasdidtmnvvlreqfiklhevdlvlrlkeefdqryknyvkigKlkrstdlaqkiirirkdlsrklgrsttladeiyfekkrqellnspliedrnvgekmvttvslfeditdldalegmsvllplrlpeippkgdfdvtvlrnsqyffs >8q63_AB:DNA/RNA_polymerases;S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYO-EM STRUCTURE OF IC8', A SECOND STATE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH 8-MER RNA, PPPGPGPUPAPAPAPUPG organism=? DNA sequence DG(T10):DC(N137) DC(T11):DG(N136) DA(T12):DT(N135) DA(T13):DT(N134) DT(T14):DA(N133) DT(T15):DA(N132) DT(T16):DA(N131) DG(T17):DC(N130) DC(T18):DG(N129) DA(T19):DT(N128) DT(T20):DA(N127) DT(T21):DA(N126) DT(T22):DA(N125) DA(T23):DT(N124) DC(T24):DA(N123) DC(T25):DA(N122) DG(T26):DT(N121) DA(T27):DG(N120) DC(T28):DA(N119) DA(T29):DA(N118) DA(T30):DT(N117) DT(T31):DA(N116) DA(T32):DT(N115) DT(T33):DA(N114) DC(T34):DG(N113) DA(T35):DT(N112) DA(T36):DT(N111) DT(T37):DA(N110) DA(T38):DT(N109) DC(T39):DG(N108) DT(T40):DA(N107) chainB ( 17) TYR18 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) ASP101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (102) TYR103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) ASP104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 (104) TRP105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0 0 0 0 0 0 0 0 0 0 0 (143) GLU144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 (147) MET148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 (148) GLN149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA (135) ASN520 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (142) ARG530 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (144) ALA532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (145) ARG533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (148) ILE536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (171) GLN594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 (217) TYR640 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (218) HIS641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) ASN642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (221) SER644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 (222) LYS645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 3 0 0 0 0 0 0 0 0 (371) SER798 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (375) ASP802 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (400) ARG827 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (404) TYR831 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (595) TYR1022 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (597) VAL1024 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (598) THR1025 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (599) TYR1026 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (600) VAL1027 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (605) GLN1032 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (702) GLN1129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 7 0 0 0 0 0 0 0 0 (711) PHE1138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 (712) ILE1139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 (713) SER1140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (724) ARG1151 0 0 0 0 1 2 6 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (736) HIS1163 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (810) LYS1237 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence inffeiynslptleekkafesalnifnqdrqkvlenrateaarerwkhdfeeakargdisieknlnvklwkwynemlplvkeeinhcrsllseklsdkkglnkvdtnrlgygpyltlidpgkmcvitilellklNstgegmRtARavIsvgkaiemefrseqvlkkilwpQsirarigsvlismliqvakvsvqgvdpvtkakvhgeapafahgyqYHNgSKlgvlkihktlirqlngerliasvqpqllpmlvepkpwvnwrsggyhytqstllrtkdspeqvaylkaasdngdidrvydglnvlgrtpwtvnrkvfdvvsqvwnkgegfldipgaqdemvlppapppsilrawklqvktiankfssdrSnrcDtnykleiaraflgeklyfphnldfRgraYplsphfnhlgndmsrgllifwhgkklgpsglkwlkihlsnlfgfdklplkdrvafteshlqdikdsaenpltgdrwwttadkpwqalatcfelnevmkmdnpeefishqpvhqdgtcnglqhyaalggdvegatqvnlvpsdkpqdvyahvarlvqkrleiaaekgdenakilkdkitrkvvkqtvmtnvYgVTYVgatfQiakqlspifddrkesldfskyltkhvfsairelfhsahliqdwlgesakrisksirldvdeksfkngnkpdfmssviwttplglpivqpyreeskkQvetnlqtvFISdpfavnpvnaRrqkaglppnfiHsldashmllsaaecgkqgldfasvhdsywthasdidtmnvvlreqfiklhevdlvlrlkeefdqryknyvkigKlkrstdlaqkiirirkdlsrklgrsttladeiyfekkrqellnspliedrnvgekmvttvslfeditdldalegmsvllplrlpeippkgdfdvtvlrnsqyffs/svpipgikdisklkffYgfkylwnptvynkifdkldltktykhpeelkvldlypgvgiqsaifynkycprqysllekrsslykflnakfegsplqilkrDpYDWstysnlideerifvpevqssdhindkfltvanvtgegsEgliMQwlscignknwlyrfgkvkmllwmpsttarkllarpgmhsrskcsvvreaftdtkliaisdanelkgfdsqcieewdpilfsaaeiwptkgkpialvemdpidfdfdvdnwdyvtrhlmilkrtplntvmdslghggqqyfnsritdkdllkkcpidltndefiyltklfmewpfkpdilmd >8scg_AD: title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 0H (GROUND STATE) organism=Geobacillus stearothermophilus DNA sequence DC(c1):DG(b12) DA(c2):DC(b11) DC(c3):DA(b10) DG(c4):DC(b9) DC(c5):DG(b8) DT(c6):DA(b7) DG(c7):DC(b6) DA(c8):DT(b5) DT(c9):DA(b4) DC(c10):DG(b3) DG(c11):DC(b2) DC(c12):DG(b1) chainA (285) LYS582 0 0 0 0 0 0 6 3 0 0 0 0 (318) ARG615 0 0 0 3 3 0 0 0 0 0 0 0 (328) ASN625 0 0 0 0 1 7 3 0 0 0 0 0 (410) ALA707 0 0 1 0 0 0 0 0 0 0 0 0 (413) TYR710 0 0 1 0 0 0 0 0 0 0 0 0 (417) TYR714 0 0 3 0 0 0 0 0 0 0 0 0 (419) ILE716 0 0 4 0 0 0 0 0 0 0 0 0 (420) SER717 0 4 0 0 0 0 0 0 0 0 0 0 (422) TYR719 0 24 0 0 0 0 0 0 0 0 0 0 (432) ARG729 0 9 0 0 0 0 0 0 0 0 0 0 (500) GLN797 0 0 0 4 0 0 0 0 0 0 0 0 (532) HIS829 0 0 0 0 1 0 0 0 0 0 0 0 chainD (318) ARG615 3 0 0 0 0 0 0 0 0 0 0 0 (410) ALA707 0 1 0 0 0 0 0 0 0 0 0 0 (417) TYR714 0 4 0 0 0 0 0 0 0 0 0 0 (419) ILE716 0 4 0 0 0 0 0 0 0 0 0 0 (420) SER717 0 0 1 0 0 0 0 0 0 0 0 0 (422) TYR719 0 0 35 0 0 0 0 0 0 0 0 0 (432) ARG729 0 0 6 0 0 0 0 0 0 0 0 0 (500) GLN797 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnYgivYgISdYglaqnlnisRkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepnlqnipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnygivYgISdYglaqnlnisRkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scg_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 0H (GROUND STATE) organism=Geobacillus stearothermophilus DNA sequence DG(b1):DC(c12) DC(b2):DG(c11) DG(b3):DC(c10) DA(b4):DT(c9) DT(b5):DA(c8) DC(b6):DG(c7) DA(b7):DT(c6) DG(b8):DC(c5) DC(b9):DG(c4) DA(b10):DC(c3) DC(b11):DA(c2) DG(b12):DC(c1) chainD (318) ARG615 0 0 0 0 0 0 0 0 0 0 0 3 (410) ALA707 0 0 0 0 0 0 0 0 0 0 1 0 (417) TYR714 0 0 0 0 0 0 0 0 0 0 4 0 (419) ILE716 0 0 0 0 0 0 0 0 0 0 4 0 (420) SER717 0 0 0 0 0 0 0 0 0 1 0 0 (422) TYR719 0 0 0 0 0 0 0 0 0 35 0 0 (432) ARG729 0 0 0 0 0 0 0 0 0 6 0 0 (500) GLN797 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepnlqnipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnygivYgISdYglaqnlnisRkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8sci_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 1H organism=Geobacillus stearothermophilus DNA sequence DA(c13):DA(b22) DG(c14):DC(b21) DC(c15):DG(b20) DG(c16):DC(b19) DA(c17):DT(b18) DT(c18):DA(b17) DC(c19):DG(b16) DA(c20):DT(b15) DG(c21):DC(b14) DG(c22):DG(b13) chainA (234) PRO531 2 0 0 0 0 0 0 0 0 0 (235) LYS532 14 0 0 0 0 0 0 0 0 0 (255) THR552 8 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgystsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8sci_AD: title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 1H organism=Geobacillus stearothermophilus DNA sequence DG(b13):DG(c22) DC(b14):DG(c21) DT(b15):DA(c20) DG(b16):DC(c19) DA(b17):DT(c18) DT(b18):DA(c17) DC(b19):DG(c16) DG(b20):DC(c15) DC(b21):DG(c14) DA(b22):DA(c13) chainA (234) PRO531 0 0 0 0 0 0 0 0 0 2 (235) LYS532 0 0 0 0 0 0 0 0 0 14 (255) THR552 0 0 0 0 0 0 0 0 0 8 chainD (235) LYS532 0 0 0 0 0 0 0 0 0 25 (255) THR552 0 0 0 0 0 0 0 0 0 5 (257) TYR554 0 0 0 0 0 0 0 0 0 4 (285) LYS582 0 0 0 6 3 0 0 0 0 0 (290) TYR587 0 0 1 0 0 0 0 0 0 0 (318) ARG615 5 4 0 0 0 0 0 0 0 0 (325) ASN622 0 0 0 1 0 0 0 0 0 0 (328) ASN625 0 1 7 3 0 0 0 0 0 0 (410) ALA707 1 0 0 0 0 0 0 0 0 0 (413) TYR710 17 0 0 0 0 0 0 0 0 0 (417) TYR714 6 0 0 0 0 0 0 0 0 0 (500) GLN797 4 1 0 0 0 0 0 0 0 0 (532) HIS829 0 2 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgystsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnYgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scj_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 2H organism=Geobacillus stearothermophilus DNA sequence DA(c13):DA(b22) DG(c14):DC(b21) DC(c15):DG(b20) DG(c16):DC(b19) DA(c17):DT(b18) DT(c18):DA(b17) DC(c19):DG(b16) DA(c20):DT(b15) DG(c21):DC(b14) DG(c22):DG(b13) chainA (234) PRO531 2 0 0 0 0 0 0 0 0 0 (235) LYS532 24 0 0 0 0 0 0 0 0 0 (255) THR552 11 0 0 0 0 0 0 0 0 0 (257) TYR554 1 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scj_AD: title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 2H organism=Geobacillus stearothermophilus DNA sequence DA(c13):DA(b22) DG(c14):DC(b21) DC(c15):DG(b20) DG(c16):DC(b19) DA(c17):DT(b18) DT(c18):DA(b17) DC(c19):DG(b16) DA(c20):DT(b15) DG(c21):DC(b14) DG(c22):DG(b13) chainA (234) PRO531 2 0 0 0 0 0 0 0 0 0 (235) LYS532 24 0 0 0 0 0 0 0 0 0 (255) THR552 11 0 0 0 0 0 0 0 0 0 (257) TYR554 1 0 0 0 0 0 0 0 0 0 chainD (235) LYS532 20 0 0 0 0 0 0 0 0 0 (255) THR552 4 0 0 0 0 0 0 0 0 0 (257) TYR554 4 0 0 0 0 0 0 0 0 0 (285) LYS582 0 0 0 0 0 3 5 0 0 0 (290) TYR587 0 0 0 0 0 0 0 1 0 0 (318) ARG615 0 0 0 0 0 0 0 0 3 3 (328) ASN625 0 0 0 0 0 0 3 5 0 0 (409) LYS706 0 0 0 0 0 0 0 0 0 5 (413) TYR710 0 0 0 0 0 0 0 0 0 20 (417) TYR714 0 0 0 0 0 0 0 0 0 6 (496) ASN793 0 0 0 0 0 0 0 0 0 1 (500) GLN797 0 0 0 0 0 0 0 0 0 4 (532) HIS829 0 0 0 0 0 0 0 0 1 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepnlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqaKavnYgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8sck_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 4H organism=Geobacillus stearothermophilus DNA sequence DA(c13):DA(b22) DG(c14):DC(b21) DC(c15):DG(b20) DG(c16):DC(b19) DA(c17):DT(b18) DT(c18):DA(b17) DC(c19):DG(b16) DA(c20):DT(b15) DG(c21):DC(b14) DG(c22):DG(b13) chainA (234) PRO531 5 0 0 0 0 0 0 0 0 0 (235) LYS532 14 0 0 0 0 0 0 0 0 0 (255) THR552 8 0 0 0 0 0 0 0 0 0 (257) TYR554 3 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8sck_AD: title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 4H organism=Geobacillus stearothermophilus DNA sequence DG(b13):DG(c22) DC(b14):DG(c21) DT(b15):DA(c20) DG(b16):DC(c19) DA(b17):DT(c18) DT(b18):DA(c17) DC(b19):DG(c16) DG(b20):DC(c15) DC(b21):DG(c14) DA(b22):DA(c13) chainA (234) PRO531 0 0 0 0 0 0 0 0 0 5 (235) LYS532 0 0 0 0 0 0 0 0 0 14 (255) THR552 0 0 0 0 0 0 0 0 0 8 (257) TYR554 0 0 0 0 0 0 0 0 0 3 chainD (234) PRO531 0 0 0 0 0 0 0 0 0 1 (235) LYS532 0 0 0 0 0 0 0 0 0 27 (255) THR552 0 0 0 0 0 0 0 0 0 6 (257) TYR554 0 0 0 0 0 0 0 0 0 5 (285) LYS582 0 0 0 6 3 0 0 0 0 0 (318) ARG615 3 4 0 0 0 0 0 0 0 0 (328) ASN625 0 1 7 3 0 0 0 0 0 0 (332) ARG629 0 2 0 0 0 0 0 0 0 0 (413) TYR710 17 0 0 0 0 0 0 0 0 0 (417) TYR714 4 0 0 0 0 0 0 0 0 0 (500) GLN797 4 1 0 0 0 0 0 0 0 0 (532) HIS829 0 2 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnYgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scl_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 6H organism=Geobacillus stearothermophilus DNA sequence DA(c13):DA(b22) DG(c14):DC(b21) DC(c15):DG(b20) DG(c16):DC(b19) DA(c17):DT(b18) DT(c18):DA(b17) DC(c19):DG(b16) DA(c20):DT(b15) DG(c21):DC(b14) DG(c22):DG(b13) chainA (234) PRO531 3 0 0 0 0 0 0 0 0 0 (235) LYS532 10 0 0 0 0 0 0 0 0 0 (255) THR552 6 0 0 0 0 0 0 0 0 0 (257) TYR554 1 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scl_AD: title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 6H organism=Geobacillus stearothermophilus DNA sequence DA(c13):DA(b22) DG(c14):DC(b21) DC(c15):DG(b20) DG(c16):DC(b19) DA(c17):DT(b18) DT(c18):DA(b17) DC(c19):DG(b16) DA(c20):DT(b15) DG(c21):DC(b14) DG(c22):DG(b13) chainA (234) PRO531 3 0 0 0 0 0 0 0 0 0 (235) LYS532 10 0 0 0 0 0 0 0 0 0 (255) THR552 6 0 0 0 0 0 0 0 0 0 (257) TYR554 1 0 0 0 0 0 0 0 0 0 chainD (235) LYS532 22 0 0 0 0 0 0 0 0 0 (255) THR552 9 0 0 0 0 0 0 0 0 0 (257) TYR554 1 0 0 0 0 0 0 0 0 0 (285) LYS582 0 0 0 0 0 3 7 0 0 0 (290) TYR587 0 0 0 0 0 0 0 1 0 0 (318) ARG615 0 0 0 0 0 0 0 0 3 3 (328) ASN625 0 0 0 0 0 0 3 6 1 0 (332) ARG629 0 0 0 0 0 0 0 0 6 0 (406) ARG703 0 0 0 0 0 0 0 0 0 6 (413) TYR710 0 0 0 0 0 0 0 0 0 19 (417) TYR714 0 0 0 0 0 0 0 0 0 2 (500) GLN797 0 0 0 0 0 0 0 0 0 4 (532) HIS829 0 0 0 0 0 0 0 0 2 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepnlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrRqakavnYgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scm_AD: title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 8H organism=Geobacillus stearothermophilus DNA sequence DG(b13):DG(c22) DC(b14):DG(c21) DT(b15):DA(c20) DG(b16):DC(c19) DA(b17):DT(c18) DT(b18):DA(c17) DC(b19):DG(c16) DG(b20):DC(c15) DC(b21):DG(c14) DA(b22):DA(c13) chainA (234) PRO531 0 0 0 0 0 0 0 0 0 4 (235) LYS532 0 0 0 0 0 0 0 0 0 13 (255) THR552 0 0 0 0 0 0 0 0 0 8 (257) TYR554 0 0 0 0 0 0 0 0 0 3 chainD (235) LYS532 0 0 0 0 0 0 0 0 0 29 (255) THR552 0 0 0 0 0 0 0 0 0 6 (257) TYR554 0 0 0 0 0 0 0 0 0 2 (285) LYS582 0 0 0 6 3 0 0 0 0 0 (290) TYR587 0 0 1 0 0 0 0 0 0 0 (318) ARG615 3 3 0 0 0 0 0 0 0 0 (328) ASN625 0 1 8 3 0 0 0 0 0 0 (406) ARG703 1 0 0 0 0 0 0 0 0 0 (410) ALA707 1 0 0 0 0 0 0 0 0 0 (413) TYR710 20 0 0 0 0 0 0 0 0 0 (417) TYR714 6 0 0 0 0 0 0 0 0 0 (496) ASN793 1 0 0 0 0 0 0 0 0 0 (500) GLN797 4 0 0 0 0 0 0 0 0 0 (532) HIS829 0 2 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrRqakAvnYgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scm_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 8H organism=Geobacillus stearothermophilus DNA sequence DA(c13):DA(b22) DG(c14):DC(b21) DC(c15):DG(b20) DG(c16):DC(b19) DA(c17):DT(b18) DT(c18):DA(b17) DC(c19):DG(b16) DA(c20):DT(b15) DG(c21):DC(b14) DG(c22):DG(b13) chainD (235) LYS532 29 0 0 0 0 0 0 0 0 0 (255) THR552 6 0 0 0 0 0 0 0 0 0 (257) TYR554 2 0 0 0 0 0 0 0 0 0 (285) LYS582 0 0 0 0 0 3 6 0 0 0 (290) TYR587 0 0 0 0 0 0 0 1 0 0 (318) ARG615 0 0 0 0 0 0 0 0 3 3 (328) ASN625 0 0 0 0 0 0 3 8 1 0 (406) ARG703 0 0 0 0 0 0 0 0 0 1 (410) ALA707 0 0 0 0 0 0 0 0 0 1 (413) TYR710 0 0 0 0 0 0 0 0 0 20 (417) TYR714 0 0 0 0 0 0 0 0 0 6 (496) ASN793 0 0 0 0 0 0 0 0 0 1 (500) GLN797 0 0 0 0 0 0 0 0 0 4 (532) HIS829 0 0 0 0 0 0 0 0 2 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrRqakAvnYgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scn_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 24H (PRODUCT STATE) organism=Geobacillus stearothermophilus DNA sequence DA(c13):DA(b22) DG(c14):DC(b21) DC(c15):DG(b20) DG(c16):DC(b19) DA(c17):DT(b18) DT(c18):DA(b17) DC(c19):DG(b16) DA(c20):DT(b15) DG(c21):DC(b14) DG(c22):DG(b13) chainA (234) PRO531 3 0 0 0 0 0 0 0 0 0 (235) LYS532 25 0 0 0 0 0 0 0 0 0 (255) THR552 5 0 0 0 0 0 0 0 0 0 (257) TYR554 4 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scn_AD: title=BST DNA POLYMERASE I LARGE FRAGMENT MUTANT F710Y/D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 24H (PRODUCT STATE) organism=Geobacillus stearothermophilus DNA sequence DG(b13):DG(c22) DC(b14):DG(c21) DT(b15):DA(c20) DG(b16):DC(c19) DA(b17):DT(c18) DT(b18):DA(c17) DC(b19):DG(c16) DG(b20):DC(c15) DC(b21):DG(c14) DA(b22):DA(c13) chainA (234) PRO531 0 0 0 0 0 0 0 0 0 3 (235) LYS532 0 0 0 0 0 0 0 0 0 25 (255) THR552 0 0 0 0 0 0 0 0 0 5 (257) TYR554 0 0 0 0 0 0 0 0 0 4 chainD (235) LYS532 0 0 0 0 0 0 0 0 0 25 (255) THR552 0 0 0 0 0 0 0 0 0 6 (257) TYR554 0 0 0 0 0 0 0 0 0 5 (285) LYS582 0 0 0 6 3 0 0 0 0 0 (290) TYR587 0 0 1 0 0 0 0 0 0 0 (318) ARG615 3 3 0 0 0 0 0 0 0 0 (328) ASN625 0 1 7 3 0 0 0 0 0 0 (406) ARG703 7 0 0 0 0 0 0 0 0 0 (409) LYS706 1 0 0 0 0 0 0 0 0 0 (410) ALA707 1 0 0 0 0 0 0 0 0 0 (413) TYR710 16 0 0 0 0 0 0 0 0 0 (417) TYR714 6 0 0 0 0 0 0 0 0 0 (496) ASN793 1 0 0 0 0 0 0 0 0 0 (500) GLN797 4 0 0 0 0 0 0 0 0 0 (532) HIS829 0 2 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrRqaKAvnYgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8sco_AD: title=BST DNA POLYMERASE I LARGE FRAGMENT WILDTYPE D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 0H (GROUND STATE) organism=Geobacillus stearothermophilus DNA sequence DC(c1):DG(b12) DA(c2):DC(b11) DC(c3):DA(b10) DG(c4):DC(b9) DC(c5):DG(b8) DT(c6):DA(b7) DG(c7):DC(b6) DA(c8):DT(b5) DT(c9):DA(b4) DC(c10):DG(b3) DG(c11):DC(b2) DC(c12):DG(b1) chainA (285) LYS582 0 0 0 0 0 0 5 3 0 0 0 0 (318) ARG615 0 0 0 3 3 0 0 0 0 0 0 0 (328) ASN625 0 0 0 0 1 6 3 0 0 0 0 0 (410) ALA707 0 0 1 0 0 0 0 0 0 0 0 0 (413) PHE710 0 0 2 0 0 0 0 0 0 0 0 0 (417) TYR714 0 0 3 0 0 0 0 0 0 0 0 0 (419) ILE716 0 0 1 0 0 0 0 0 0 0 0 0 (420) SER717 0 4 0 0 0 0 0 0 0 0 0 0 (422) TYR719 0 19 0 0 0 0 0 0 0 0 0 0 (432) ARG729 0 2 0 0 0 0 0 0 0 0 0 0 (500) GLN797 0 0 0 4 1 0 0 0 0 0 0 0 (532) HIS829 0 0 0 0 2 0 0 0 0 0 0 0 chainD (318) ARG615 3 0 0 0 0 0 0 0 0 0 0 0 (410) ALA707 0 1 0 0 0 0 0 0 0 0 0 0 (417) TYR714 0 4 0 0 0 0 0 0 0 0 0 0 (419) ILE716 0 2 0 0 0 0 0 0 0 0 0 0 (420) SER717 0 0 3 0 0 0 0 0 0 0 0 0 (422) TYR719 0 0 31 0 0 0 0 0 0 0 0 0 (432) ARG729 0 0 6 0 0 0 0 0 0 0 0 0 (500) GLN797 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnFgivYgISdYglaqnlnisRkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepnlqnipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnfgivYgISdYglaqnlnisRkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8sco_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I LARGE FRAGMENT WILDTYPE D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 0H (GROUND STATE) organism=Geobacillus stearothermophilus DNA sequence DC(c1):DG(b12) DA(c2):DC(b11) DC(c3):DA(b10) DG(c4):DC(b9) DC(c5):DG(b8) DT(c6):DA(b7) DG(c7):DC(b6) DA(c8):DT(b5) DT(c9):DA(b4) DC(c10):DG(b3) DG(c11):DC(b2) DC(c12):DG(b1) chainD (318) ARG615 3 0 0 0 0 0 0 0 0 0 0 0 (410) ALA707 0 1 0 0 0 0 0 0 0 0 0 0 (417) TYR714 0 4 0 0 0 0 0 0 0 0 0 0 (419) ILE716 0 2 0 0 0 0 0 0 0 0 0 0 (420) SER717 0 0 3 0 0 0 0 0 0 0 0 0 (422) TYR719 0 0 31 0 0 0 0 0 0 0 0 0 (432) ARG729 0 0 6 0 0 0 0 0 0 0 0 0 (500) GLN797 4 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepnlqnipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnfgivYgISdYglaqnlnisRkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scp_AD: title=BST DNA POLYMERASE I LARGE FRAGMENT WILDTYPE D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 1H organism=Geobacillus stearothermophilus DNA sequence DA(c13):DA(b22) DG(c14):DC(b21) DC(c15):DG(b20) DG(c16):DC(b19) DA(c17):DT(b18) DT(c18):DA(b17) DC(c19):DG(b16) DA(c20):DT(b15) DG(c21):DC(b14) DG(c22):DG(b13) chainA (234) PRO531 3 0 0 0 0 0 0 0 0 0 (235) LYS532 20 0 0 0 0 0 0 0 0 0 (255) THR552 4 0 0 0 0 0 0 0 0 0 (257) TYR554 4 0 0 0 0 0 0 0 0 0 chainD (234) PRO531 2 0 0 0 0 0 0 0 0 0 (235) LYS532 24 0 0 0 0 0 0 0 0 0 (255) THR552 6 0 0 0 0 0 0 0 0 0 (257) TYR554 5 0 0 0 0 0 0 0 0 0 (285) LYS582 0 0 0 0 0 3 5 1 0 0 (290) TYR587 0 0 0 0 0 0 0 1 0 0 (318) ARG615 0 0 0 0 0 0 0 0 3 3 (328) ASN625 0 0 0 0 0 0 3 6 1 0 (413) PHE710 0 0 0 0 0 0 0 0 0 13 (417) TYR714 0 0 0 0 0 0 0 0 0 5 (500) GLN797 0 0 0 0 0 0 0 0 0 4 (532) HIS829 0 0 0 0 0 0 0 0 2 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scp_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I LARGE FRAGMENT WILDTYPE D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 1H organism=Geobacillus stearothermophilus DNA sequence DG(b13):DG(c22) DC(b14):DG(c21) DT(b15):DA(c20) DG(b16):DC(c19) DA(b17):DT(c18) DT(b18):DA(c17) DC(b19):DG(c16) DG(b20):DC(c15) DC(b21):DG(c14) DA(b22):DA(c13) chainD (234) PRO531 0 0 0 0 0 0 0 0 0 2 (235) LYS532 0 0 0 0 0 0 0 0 0 24 (255) THR552 0 0 0 0 0 0 0 0 0 6 (257) TYR554 0 0 0 0 0 0 0 0 0 5 (285) LYS582 0 0 1 5 3 0 0 0 0 0 (290) TYR587 0 0 1 0 0 0 0 0 0 0 (318) ARG615 3 3 0 0 0 0 0 0 0 0 (328) ASN625 0 1 6 3 0 0 0 0 0 0 (413) PHE710 13 0 0 0 0 0 0 0 0 0 (417) TYR714 5 0 0 0 0 0 0 0 0 0 (500) GLN797 4 0 0 0 0 0 0 0 0 0 (532) HIS829 0 2 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scr_AD: title=BST DNA POLYMERASE I LARGE FRAGMENT WILDTYPE D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 4H organism=Geobacillus stearothermophilus DNA sequence DG(b13):DG(c22) DC(b14):DG(c21) DT(b15):DA(c20) DG(b16):DC(c19) DA(b17):DT(c18) DT(b18):DA(c17) DC(b19):DG(c16) DG(b20):DC(c15) DC(b21):DG(c14) DA(b22):DA(c13) chainA (234) PRO531 0 0 0 0 0 0 0 0 0 3 (235) LYS532 0 0 0 0 0 0 0 0 0 22 (255) THR552 0 0 0 0 0 0 0 0 0 6 (257) TYR554 0 0 0 0 0 0 0 0 0 4 chainD (234) PRO531 0 0 0 0 0 0 0 0 0 1 (235) LYS532 0 0 0 0 0 0 0 0 0 19 (255) THR552 0 0 0 0 0 0 0 0 0 6 (257) TYR554 0 0 0 0 0 0 0 0 0 5 (285) LYS582 0 0 1 5 3 0 0 0 0 0 (290) TYR587 0 0 1 0 0 0 0 0 0 0 (318) ARG615 3 3 0 0 0 0 0 0 0 0 (328) ASN625 0 1 6 3 0 0 0 0 0 0 (361) GLU658 1 0 0 0 0 0 0 0 0 0 (413) PHE710 16 0 0 0 0 0 0 0 0 0 (417) TYR714 2 0 0 0 0 0 0 0 0 0 (500) GLN797 4 1 0 0 0 0 0 0 0 0 (532) HIS829 0 2 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scr_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I LARGE FRAGMENT WILDTYPE D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 4H organism=Geobacillus stearothermophilus DNA sequence DG(b13):DG(c22) DC(b14):DG(c21) DT(b15):DA(c20) DG(b16):DC(c19) DA(b17):DT(c18) DT(b18):DA(c17) DC(b19):DG(c16) DG(b20):DC(c15) DC(b21):DG(c14) DA(b22):DA(c13) chainD (234) PRO531 0 0 0 0 0 0 0 0 0 1 (235) LYS532 0 0 0 0 0 0 0 0 0 19 (255) THR552 0 0 0 0 0 0 0 0 0 6 (257) TYR554 0 0 0 0 0 0 0 0 0 5 (285) LYS582 0 0 1 5 3 0 0 0 0 0 (290) TYR587 0 0 1 0 0 0 0 0 0 0 (318) ARG615 3 3 0 0 0 0 0 0 0 0 (328) ASN625 0 1 6 3 0 0 0 0 0 0 (361) GLU658 1 0 0 0 0 0 0 0 0 0 (413) PHE710 16 0 0 0 0 0 0 0 0 0 (417) TYR714 2 0 0 0 0 0 0 0 0 0 (500) GLN797 4 1 0 0 0 0 0 0 0 0 (532) HIS829 0 2 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scs_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I LARGE FRAGMENT WILDTYPE D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 8H organism=Geobacillus stearothermophilus DNA sequence DG(b13):DG(c22) DC(b14):DG(c21) DT(b15):DA(c20) DG(b16):DC(c19) DA(b17):DT(c18) DT(b18):DA(c17) DC(b19):DG(c16) DG(b20):DC(c15) DC(b21):DG(c14) DA(b22):DA(c13) chainA (234) PRO531 0 0 0 0 0 0 0 0 0 6 (235) LYS532 0 0 0 0 0 0 0 0 0 23 (255) THR552 0 0 0 0 0 0 0 0 0 6 (257) TYR554 0 0 0 0 0 0 0 0 0 4 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scs_AD: title=BST DNA POLYMERASE I LARGE FRAGMENT WILDTYPE D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 8H organism=Geobacillus stearothermophilus DNA sequence DA(c13):DA(b22) DG(c14):DC(b21) DC(c15):DG(b20) DG(c16):DC(b19) DA(c17):DT(b18) DT(c18):DA(b17) DC(c19):DG(b16) DA(c20):DT(b15) DG(c21):DC(b14) DG(c22):DG(b13) chainA (234) PRO531 6 0 0 0 0 0 0 0 0 0 (235) LYS532 23 0 0 0 0 0 0 0 0 0 (255) THR552 6 0 0 0 0 0 0 0 0 0 (257) TYR554 4 0 0 0 0 0 0 0 0 0 chainD (234) PRO531 4 0 0 0 0 0 0 0 0 0 (235) LYS532 17 0 0 0 0 0 0 0 0 0 (255) THR552 8 0 0 0 0 0 0 0 0 0 (257) TYR554 4 0 0 0 0 0 0 0 0 0 (285) LYS582 0 0 0 0 0 3 5 0 0 0 (290) TYR587 0 0 0 0 0 0 0 1 0 0 (318) ARG615 0 0 0 0 0 0 0 0 3 3 (328) ASN625 0 0 0 0 0 0 3 6 1 0 (410) ALA707 0 0 0 0 0 0 0 0 0 1 (413) PHE710 0 0 0 0 0 0 0 0 0 14 (417) TYR714 0 0 0 0 0 0 0 0 0 4 (496) ASN793 0 0 0 0 0 0 0 0 0 1 (500) GLN797 0 0 0 0 0 0 0 0 0 4 (532) HIS829 0 0 0 0 0 0 0 0 2 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8sct_AD: title=BST DNA POLYMERASE I LARGE FRAGMENT WILDTYPE D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 24H organism=Geobacillus stearothermophilus DNA sequence DA(c13):DA(b22) DG(c14):DC(b21) DC(c15):DG(b20) DG(c16):DC(b19) DA(c17):DT(b18) DT(c18):DA(b17) DC(c19):DG(b16) DA(c20):DT(b15) DG(c21):DC(b14) DG(c22):DG(b13) chainA (234) PRO531 3 0 0 0 0 0 0 0 0 0 (235) LYS532 18 0 0 0 0 0 0 0 0 0 (255) THR552 6 0 0 0 0 0 0 0 0 0 (257) TYR554 4 0 0 0 0 0 0 0 0 0 chainD (234) PRO531 2 0 0 0 0 0 0 0 0 0 (235) LYS532 28 0 0 0 0 0 0 0 0 0 (255) THR552 7 0 0 0 0 0 0 0 0 0 (257) TYR554 5 0 0 0 0 0 0 0 0 0 (285) LYS582 0 0 0 0 0 3 6 1 0 0 (290) TYR587 0 0 0 0 0 0 0 1 0 0 (318) ARG615 0 0 0 0 0 0 0 0 3 3 (328) ASN625 0 0 0 0 0 0 3 8 1 0 (413) PHE710 0 0 0 0 0 0 0 0 0 20 (417) TYR714 0 0 0 0 0 0 0 0 0 2 (500) GLN797 0 0 0 0 0 0 0 0 0 4 (532) HIS829 0 0 0 0 0 0 0 0 2 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8sct_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I LARGE FRAGMENT WILDTYPE D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 24H organism=Geobacillus stearothermophilus DNA sequence DA(c13):DA(b22) DG(c14):DC(b21) DC(c15):DG(b20) DG(c16):DC(b19) DA(c17):DT(b18) DT(c18):DA(b17) DC(c19):DG(b16) DA(c20):DT(b15) DG(c21):DC(b14) DG(c22):DG(b13) chainD (234) PRO531 2 0 0 0 0 0 0 0 0 0 (235) LYS532 28 0 0 0 0 0 0 0 0 0 (255) THR552 7 0 0 0 0 0 0 0 0 0 (257) TYR554 5 0 0 0 0 0 0 0 0 0 (285) LYS582 0 0 0 0 0 3 6 1 0 0 (290) TYR587 0 0 0 0 0 0 0 1 0 0 (318) ARG615 0 0 0 0 0 0 0 0 3 3 (328) ASN625 0 0 0 0 0 0 3 8 1 0 (413) PHE710 0 0 0 0 0 0 0 0 0 20 (417) TYR714 0 0 0 0 0 0 0 0 0 2 (500) GLN797 0 0 0 0 0 0 0 0 0 4 (532) HIS829 0 0 0 0 0 0 0 0 2 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scu_AD: title=BST DNA POLYMERASE I LARGE FRAGMENT WILDTYPE D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 48H (PRODUCT STATE) organism=Geobacillus stearothermophilus DNA sequence DA(c13):DA(b22) DG(c14):DC(b21) DC(c15):DG(b20) DG(c16):DC(b19) DA(c17):DT(b18) DT(c18):DA(b17) DC(c19):DG(b16) DA(c20):DT(b15) DG(c21):DC(b14) DG(c22):DG(b13) chainA (234) PRO531 2 0 0 0 0 0 0 0 0 0 (235) LYS532 17 0 0 0 0 0 0 0 0 0 (255) THR552 6 0 0 0 0 0 0 0 0 0 (257) TYR554 5 0 0 0 0 0 0 0 0 0 chainD (235) LYS532 24 0 0 0 0 0 0 0 0 0 (255) THR552 6 0 0 0 0 0 0 0 0 0 (257) TYR554 4 0 0 0 0 0 0 0 0 0 (285) LYS582 0 0 0 0 0 3 7 1 0 0 (290) TYR587 0 0 0 0 0 0 0 1 0 0 (318) ARG615 0 0 0 0 0 0 0 0 4 3 (328) ASN625 0 0 0 0 0 0 2 7 1 0 (409) LYS706 0 0 0 0 0 0 0 0 0 1 (410) ALA707 0 0 0 0 0 0 0 0 0 1 (413) PHE710 0 0 0 0 0 0 0 0 0 23 (417) TYR714 0 0 0 0 0 0 0 0 0 6 (496) ASN793 0 0 0 0 0 0 0 0 0 2 (500) GLN797 0 0 0 0 0 0 0 0 0 4 (532) HIS829 0 0 0 0 0 0 0 0 2 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninsPKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgklqstyiegllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak/kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqaKAvnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8scu_D:DNA/RNA_polymerases;Ribonuclease_H-like; title=BST DNA POLYMERASE I LARGE FRAGMENT WILDTYPE D598A WITH 3'-AMINO PRIMER, DGTP, AND CALCIUM TIME-RESOLVED 48H (PRODUCT STATE) organism=Geobacillus stearothermophilus DNA sequence DG(b13):DG(c22) DC(b14):DG(c21) DT(b15):DA(c20) DG(b16):DC(c19) DA(b17):DT(c18) DT(b18):DA(c17) DC(b19):DG(c16) DG(b20):DC(c15) DC(b21):DG(c14) DA(b22):DA(c13) chainD (235) LYS532 0 0 0 0 0 0 0 0 0 24 (255) THR552 0 0 0 0 0 0 0 0 0 6 (257) TYR554 0 0 0 0 0 0 0 0 0 4 (285) LYS582 0 0 1 7 3 0 0 0 0 0 (290) TYR587 0 0 1 0 0 0 0 0 0 0 (318) ARG615 3 4 0 0 0 0 0 0 0 0 (328) ASN625 0 1 7 2 0 0 0 0 0 0 (409) LYS706 1 0 0 0 0 0 0 0 0 0 (410) ALA707 1 0 0 0 0 0 0 0 0 0 (413) PHE710 23 0 0 0 0 0 0 0 0 0 (417) TYR714 6 0 0 0 0 0 0 0 0 0 (496) ASN793 2 0 0 0 0 0 0 0 0 0 (500) GLN797 4 0 0 0 0 0 0 0 0 0 (532) HIS829 0 2 0 0 0 0 0 0 0 0 prot.sequence kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspKqlgvilfeklqlpvlkktkTgYstsadvleklapyheivenilhyrqlgKlqsTYiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqaKAvnFgivYgisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak >8sh0_A:Nucleic_acid-binding_proteins; title=STRUCTURE OF HUMAN POT1 DNA BINDING DOMAIN BOUND TO A 5'- PHOSPHORYLATED JUNCTION OF A TELOMERIC DNA HAIRPIN WITH A 3'- OVERHANG organism=Homo sapiens DNA sequence DC(B-7):DG(B0) DC(B-6):DG(B-1) chainA ( 4) TYR9 2 0 ( 78) ARG83 29 0 ( 94) SER99 10 0 prot.sequence atnYiytplnqlkggtivnvygvvkffkppylskgtdycsvvtivdqtnvkltcllfsgnyealpiiykngdivrfhRlkiqvykketqgitsSgfasltfegtlgapiiprtsskyfnfttedhkmvealrvwasthmspswtllklcdvqpmqyfdltcqllgkaevdgasfllkvwdgtrtpfpswrvliqdlvlegdlshihrlqnltidilvydnhvhvarslkvgsflriyslhtklqsmnsenqtmlslefhlhggtsygrgirvlpesnsdvdqlkkdlesanlta >8sh1_A:Nucleic_acid-binding_proteins; title=STRUCTURE OF HUMAN POT1 DNA BINDING DOMAIN BOUND TO A 5'- PHOSPHORYLATED JUNCTION OF A TELOMERIC DOUBLE-STRANDED DNA DUPLEX WITH A 3'-OVERHANG organism=Homo sapiens DNA sequence DC(C0):DG(B0) DT(C1):DA(B-1) DA(C2):DT(B-2) DA(C3):DT(B-3) DC(C4):DG(B-4) DG(C5):DC(B-5) DC(C6):DG(B-6) DG(C7):DC(B-7) DC(C8):DG(B-8) DG(C9):DC(B-9) chainA ( 4) TYR9 1 0 0 0 0 0 0 0 0 0 ( 78) ARG83 27 0 0 0 0 0 0 0 0 0 ( 94) SER99 5 0 0 0 0 0 0 0 0 0 prot.sequence atnYiytplnqlkggtivnvygvvkffkppylskgtdycsvvtivdqtnvkltcllfsgnyealpiiykngdivrfhRlkiqvykketqgitsSgfasltfegtlgapiiprtsskyfnfttedhkmvealrvwasthmspswtllklcdvqpmqyfdltcqllgkaevdgasfllkvwdgtrtpfpswrvliqdlvlegdlshihrlqnltidilvydnhvhvarslkvgsflriyslhtklqsmnsenqtmlslefhlhggtsygrgirvlpesnsdvdqlkkdlesanlt >8siy_CDEFGHIJ:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=ORIGIN RECOGNITION COMPLEX ASSOCIATED (ORCA) PROTEIN BOUND TO H4K20ME3-NUCLEOSOME organism=? DNA sequence DT(K-75):DA(L75) DC(K-74):DG(L74) DC(K-73):DG(L73) DT(K-72):DA(L72) DG(K-71):DC(L71) DG(K-70):DC(L70) DA(K-69):DT(L69) DG(K-68):DC(L68) DA(K-67):DT(L67) DA(K-66):DT(L66) DT(K-65):DA(L65) DC(K-64):DG(L64) DC(K-63):DG(L63) DC(K-62):DG(L62) DG(K-61):DC(L61) DG(K-60):DC(L60) DT(K-59):DA(L59) DG(K-58):DC(L58) DC(K-57):DG(L57) DC(K-56):DG(L56) DG(K-55):DC(L55) DA(K-54):DT(L54) DG(K-53):DC(L53) DG(K-52):DC(L52) DC(K-51):DG(L51) DC(K-50):DG(L50) DG(K-49):DC(L49) DC(K-48):DG(L48) DT(K-47):DA(L47) DC(K-46):DG(L46) DA(K-45):DT(L45) DA(K-44):DT(L44) DT(K-43):DA(L43) DT(K-42):DA(L42) DG(K-41):DC(L41) DG(K-40):DC(L40) DT(K-39):DA(L39) DC(K-38):DG(L38) DG(K-37):DC(L37) DT(K-36):DA(L36) DA(K-35):DT(L35) DG(K-34):DC(L34) DA(K-33):DT(L33) DC(K-32):DG(L32) DA(K-31):DT(L31) DG(K-30):DC(L30) DC(K-29):DG(L29) DT(K-28):DA(L28) DC(K-27):DG(L27) DT(K-26):DA(L26) DA(K-25):DT(L25) DG(K-24):DC(L24) DC(K-23):DG(L23) DA(K-22):DT(L22) DC(K-21):DG(L21) DC(K-20):DG(L20) DG(K-19):DC(L19) DC(K-18):DG(L18) DT(K-17):DA(L17) DT(K-16):DA(L16) DA(K-15):DT(L15) DA(K-14):DT(L14) DA(K-13):DT(L13) DC(K-12):DG(L12) DG(K-11):DC(L11) DC(K-10):DG(L10) DA(K-9):DT(L9) DC(K-8):DG(L8) DG(K-7):DC(L7) DT(K-6):DA(L6) DA(K-5):DT(L5) DC(K-4):DG(L4) DG(K-3):DC(L3) DC(K-2):DG(L2) DG(K-1):DC(L1) DC(K0):DG(L0) DT(K1):DA(L-1) DG(K2):DC(L-2) DT(K3):DA(L-3) DC(K4):DG(L-4) DC(K5):DG(L-5) DC(K6):DG(L-6) DC(K7):DG(L-7) DC(K8):DG(L-8) DG(K9):DC(L-9) DC(K10):DG(L-10) DG(K11):DC(L-11) DT(K12):DA(L-12) DT(K13):DA(L-13) DT(K14):DA(L-14) DT(K15):DA(L-15) DA(K16):DT(L-16) DA(K17):DT(L-17) DC(K18):DG(L-18) DC(K19):DG(L-19) DG(K20):DC(L-20) DC(K21):DG(L-21) DC(K22):DG(L-22) DA(K23):DT(L-23) DA(K24):DT(L-24) DG(K25):DC(L-25) DG(K26):DC(L-26) DG(K27):DC(L-27) DG(K28):DC(L-28) DA(K29):DT(L-29) DT(K30):DA(L-30) DT(K31):DA(L-31) DA(K32):DT(L-32) DC(K33):DG(L-33) DT(K34):DA(L-34) DC(K35):DG(L-35) DC(K36):DG(L-36) DC(K37):DG(L-37) DT(K38):DA(L-38) DA(K39):DT(L-39) DG(K40):DC(L-40) DT(K41):DA(L-41) DC(K42):DG(L-42) DT(K43):DA(L-43) DC(K44):DG(L-44) DC(K45):DG(L-45) DA(K46):DT(L-46) DG(K47):DC(L-47) DG(K48):DC(L-48) DC(K49):DG(L-49) DA(K50):DT(L-50) DC(K51):DG(L-51) DG(K52):DC(L-52) DT(K53):DA(L-53) DG(K54):DC(L-54) DT(K55):DA(L-55) DC(K56):DG(L-56) DA(K57):DT(L-57) DG(K58):DC(L-58) DA(K59):DT(L-59) DT(K60):DA(L-60) DA(K61):DT(L-61) DT(K62):DA(L-62) DA(K63):DT(L-63) DT(K64):DA(L-64) DA(K65):DT(L-65) DC(K66):DG(L-66) DA(K67):DT(L-67) DT(K68):DA(L-68) DC(K69):DG(L-69) DC(K70):DG(L-70) DT(K71):DA(L-71) chainC ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 2) HIS39 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH chainI ( 1) ARG11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/dNIQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdAvtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/Ktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/rHRVlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflEnvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/Rakaktrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8siy_G:Histone-fold; title=ORIGIN RECOGNITION COMPLEX ASSOCIATED (ORCA) PROTEIN BOUND TO H4K20ME3-NUCLEOSOME organism=? DNA sequence DA(L-71):DT(K71) DG(L-70):DC(K70) DG(L-69):DC(K69) DA(L-68):DT(K68) DT(L-67):DA(K67) DG(L-66):DC(K66) DT(L-65):DA(K65) DA(L-64):DT(K64) DT(L-63):DA(K63) DA(L-62):DT(K62) DT(L-61):DA(K61) DA(L-60):DT(K60) DT(L-59):DA(K59) DC(L-58):DG(K58) DT(L-57):DA(K57) DG(L-56):DC(K56) DA(L-55):DT(K55) DC(L-54):DG(K54) DA(L-53):DT(K53) DC(L-52):DG(K52) DG(L-51):DC(K51) DT(L-50):DA(K50) DG(L-49):DC(K49) DC(L-48):DG(K48) DC(L-47):DG(K47) DT(L-46):DA(K46) DG(L-45):DC(K45) DG(L-44):DC(K44) DA(L-43):DT(K43) DG(L-42):DC(K42) DA(L-41):DT(K41) DC(L-40):DG(K40) DT(L-39):DA(K39) DA(L-38):DT(K38) DG(L-37):DC(K37) DG(L-36):DC(K36) DG(L-35):DC(K35) DA(L-34):DT(K34) DG(L-33):DC(K33) DT(L-32):DA(K32) DA(L-31):DT(K31) DA(L-30):DT(K30) DT(L-29):DA(K29) DC(L-28):DG(K28) DC(L-27):DG(K27) DC(L-26):DG(K26) DC(L-25):DG(K25) DT(L-24):DA(K24) DT(L-23):DA(K23) DG(L-22):DC(K22) DG(L-21):DC(K21) DC(L-20):DG(K20) DG(L-19):DC(K19) DG(L-18):DC(K18) DT(L-17):DA(K17) DT(L-16):DA(K16) DA(L-15):DT(K15) DA(L-14):DT(K14) DA(L-13):DT(K13) DA(L-12):DT(K12) DC(L-11):DG(K11) DG(L-10):DC(K10) DC(L-9):DG(K9) DG(L-8):DC(K8) DG(L-7):DC(K7) DG(L-6):DC(K6) DG(L-5):DC(K5) DG(L-4):DC(K4) DA(L-3):DT(K3) DC(L-2):DG(K2) DA(L-1):DT(K1) DG(L0):DC(K0) DC(L1):DG(K-1) DG(L2):DC(K-2) DC(L3):DG(K-3) DG(L4):DC(K-4) DT(L5):DA(K-5) DA(L6):DT(K-6) DC(L7):DG(K-7) DG(L8):DC(K-8) DT(L9):DA(K-9) DG(L10):DC(K-10) DC(L11):DG(K-11) DG(L12):DC(K-12) DT(L13):DA(K-13) DT(L14):DA(K-14) DT(L15):DA(K-15) DA(L16):DT(K-16) DA(L17):DT(K-17) DG(L18):DC(K-18) DC(L19):DG(K-19) DG(L20):DC(K-20) DG(L21):DC(K-21) DT(L22):DA(K-22) DG(L23):DC(K-23) DC(L24):DG(K-24) DT(L25):DA(K-25) DA(L26):DT(K-26) DG(L27):DC(K-27) DA(L28):DT(K-28) DG(L29):DC(K-29) DC(L30):DG(K-30) DT(L31):DA(K-31) DG(L32):DC(K-32) DT(L33):DA(K-33) DC(L34):DG(K-34) DT(L35):DA(K-35) DA(L36):DT(K-36) DC(L37):DG(K-37) DG(L38):DC(K-38) DA(L39):DT(K-39) DC(L40):DG(K-40) DC(L41):DG(K-41) DA(L42):DT(K-42) DA(L43):DT(K-43) DT(L44):DA(K-44) DT(L45):DA(K-45) DG(L46):DC(K-46) DA(L47):DT(K-47) DG(L48):DC(K-48) DC(L49):DG(K-49) DG(L50):DC(K-50) DG(L51):DC(K-51) DC(L52):DG(K-52) DC(L53):DG(K-53) DT(L54):DA(K-54) DC(L55):DG(K-55) DG(L56):DC(K-56) DG(L57):DC(K-57) DC(L58):DG(K-58) DA(L59):DT(K-59) DC(L60):DG(K-60) DC(L61):DG(K-61) DG(L62):DC(K-62) DG(L63):DC(K-63) DG(L64):DC(K-64) DA(L65):DT(K-65) DT(L66):DA(K-66) DT(L67):DA(K-67) DC(L68):DG(K-68) DT(L69):DA(K-69) DC(L70):DG(K-70) DC(L71):DG(K-71) DA(L72):DT(K-72) DG(L73):DC(K-73) DG(L74):DC(K-74) DA(L75):DT(K-75) chainG ( 2) HIS39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 4) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence pHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge >8sjd_A:Ribonuclease_H-like;Hermes_dimerisation_domain; title=CRYO-EM STRUCTURE OF THE HERMES TRANSPOSASE BOUND TO TWO RIGHT-ENDS OF ITS DNA TRANSPOSON. organism=? DNA sequence DA(F2):DT(G46) DG(F3):DC(G45) DA(F4):DT(G44) DG(F5):DC(G43) DA(F6):DT(G42) DA(F7):DT(G41) DC(F8):DG(G40) DT(F9):DA(G39) DT(F10):DA(G38) DC(F11):DG(G37) DA(F12):DT(G36) DA(F13):DT(G35) DC(F14):DG(G34) DA(F15):DT(G33) DA(F16):DT(G32) DG(F17):DC(G31) DC(F18):DG(G30) DC(F19):DG(G29) DA(F20):DT(G28) DC(F21):DG(G27) DA(F22):DT(G26) DG(F23):DC(G25) DG(F24):DC(G24) DC(F25):DG(G23) DA(F26):DT(G22) DA(F27):DT(G21) DA(F28):DT(G20) DC(F29):DG(G19) DG(F30):DC(G18) DT(F31):DA(G17) DA(F32):DT(G16) DA(F33):DT(G15) DG(F34):DC(G14) DC(F35):DG(G13) DC(F36):DG(G12) DA(F37):DT(G11) DC(F38):DG(G10) DA(F39):DT(G9) DT(F40):DA(G8) DA(F41):DT(G7) DG(F42):DC(G6) DA(F43):DT(G5) DT(F44):DA(G4) DA(F45):DT(G3) DA(F46):DT(G2) DG(F47):DC(G1) chainA (238) ARG318 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) GLN375 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) ARG573 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) SER576 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence relktvsadckkeaiekcaqwvvrdcrpfsavsgsgfidmikffikvgaeygehvnveellpspitlsrkvtsdakekkalisreiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstaeniykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetpelnmpilacknivkyfkkanlqhrlrsslksecptRwnstytmlrsildnwesviqilseagetqrivhinksiiqtmvnildgferifkelQtcsspslcfvvpsilkvkeicspdvgdvadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedlelinpvcpsdefefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaaseRtfSlagniitekrnrigqqtvdsllflnsfyknfck >8sjd_AC:Ribonuclease_H-like;Hermes_dimerisation_domain;beta-beta-alpha_zinc_fingers; title=CRYO-EM STRUCTURE OF THE HERMES TRANSPOSASE BOUND TO TWO RIGHT-ENDS OF ITS DNA TRANSPOSON. organism=? DNA sequence DA(F2):DT(G46) DG(F3):DC(G45) DA(F4):DT(G44) DG(F5):DC(G43) DA(F6):DT(G42) DA(F7):DT(G41) DC(F8):DG(G40) DT(F9):DA(G39) DT(F10):DA(G38) DC(F11):DG(G37) DA(F12):DT(G36) DA(F13):DT(G35) DC(F14):DG(G34) DA(F15):DT(G33) DA(F16):DT(G32) DG(F17):DC(G31) DC(F18):DG(G30) DC(F19):DG(G29) DA(F20):DT(G28) DC(F21):DG(G27) DA(F22):DT(G26) DG(F23):DC(G25) DG(F24):DC(G24) DC(F25):DG(G23) DA(F26):DT(G22) DA(F27):DT(G21) DA(F28):DT(G20) DC(F29):DG(G19) DG(F30):DC(G18) DT(F31):DA(G17) DA(F32):DT(G16) DA(F33):DT(G15) DG(F34):DC(G14) DC(F35):DG(G13) DC(F36):DG(G12) DA(F37):DT(G11) DC(F38):DG(G10) DA(F39):DT(G9) DT(F40):DA(G8) DA(F41):DT(G7) DG(F42):DC(G6) DA(F43):DT(G5) DT(F44):DA(G4) DA(F45):DT(G3) DA(F46):DT(G2) DG(F47):DC(G1) chainC ( 65) ILE145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 ( 66) THR146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (450) LYS585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (452) ASN587 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 (453) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 chainA (238) ARG318 5 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) GLN375 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) ARG573 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (445) SER576 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence relktvsadckkeaiekcaqwvvrdcrpfsavsgsgfidmikffikvgaeygehvnveellpspitlsrkvtsdakekkalisreiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstaeniykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetpelnmpilacknivkyfkkanlqhrlrsslksecptRwnstytmlrsildnwesviqilseagetqrivhinksiiqtmvnildgferifkelQtcsspslcfvvpsilkvkeicspdvgdvadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedlelinpvcpsdefefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaaseRtfSlagniitekrnrigqqtvdsllflnsfyknfck/relktvsadckkeaiekcaqwvvrdcrpfsavsgsgfidmikffikvgaeygehvnveellpspITlsrkvtsdakekkalisreiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstaeniykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetpelnmpilacknivkyfkkanlqhrlrsslksecptrwnstytmlrsildnwesviqilseagetqrivhinksiiqtmvnildgferifkelqtcsspslcfvvpsilkvkeicspdvgdvadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedlevcpsdefefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaasertfslagniiteKrNRigqqtvdsllflnsfyknfck >8sjd_BD:Ribonuclease_H-like;Hermes_dimerisation_domain;beta-beta-alpha_zinc_fingers; title=CRYO-EM STRUCTURE OF THE HERMES TRANSPOSASE BOUND TO TWO RIGHT-ENDS OF ITS DNA TRANSPOSON. organism=? DNA sequence DA(I2):DT(J46) DG(I3):DC(J45) DA(I4):DT(J44) DG(I5):DC(J43) DA(I6):DT(J42) DA(I7):DT(J41) DC(I8):DG(J40) DT(I9):DA(J39) DT(I10):DA(J38) DC(I11):DG(J37) DA(I12):DT(J36) DA(I13):DT(J35) DC(I14):DG(J34) DA(I15):DT(J33) DA(I16):DT(J32) DG(I17):DC(J31) DC(I18):DG(J30) DC(I19):DG(J29) DA(I20):DT(J28) DC(I21):DG(J27) DA(I22):DT(J26) DG(I23):DC(J25) DG(I24):DC(J24) DC(I25):DG(J23) DA(I26):DT(J22) DA(I27):DT(J21) DA(I28):DT(J20) DC(I29):DG(J19) DG(I30):DC(J18) DT(I31):DA(J17) DA(I32):DT(J16) DA(I33):DT(J15) DG(I34):DC(J14) DC(I35):DG(J13) DC(I36):DG(J12) DA(I37):DT(J11) DC(I38):DG(J10) DA(I39):DT(J9) DT(I40):DA(J8) DA(I41):DT(J7) DG(I42):DC(J6) DA(I43):DT(J5) DT(I44):DA(J4) DA(I45):DT(J3) DA(I46):DT(J2) DG(I47):DC(J1) chainD ( 65) ILE145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (455) LYS585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 11 2 (458) ARG588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 3 0 0 chainB (238) ARG318 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (440) GLU572 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (444) SER576 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence relktvsadckkeaiekcaqwvvrdcrpfsavsgsgfidmikffikvgaeygehvnveellpspitlsrkvtsdakekkalisreiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstaeniykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetpelnmpilacknivkyfkkanlqhrlrsslksecptRwnstytmlrsildnwesviqilseagetqrivhinksiiqtmvnildgferifkelqtcsspslcfvvpsilkvkeicspdvgdvadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedlelipvcpsdefefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaasErtfSlagniitekrnrigqqtvdsllflnsfyknfck/relktvsadckkeaiekcaqwvvrdcrpfsavsgsgfidmikffikvgaeygehvnveellpspItlsrkvtsdakekkalisreiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstaeniykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetpelnmpilacknivkyfkkanlqhrlrsslksecptrwnstytmlrsildnwesviqilseagetqrivhinksiiqtmvnildgferifkelqtcsspslcfvvpsilkvkeicspdvgdvadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedlesreppvcpsdefefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaasertfslagniiteKrnRigqqtvdsllflnsfyknfck >8ski_A:DNA/RNA_polymerases;Lesion_bypass_DNA_polymerase_Y-family,_little_finger_domain; title=CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INCORPORATING 5F-DUTP ACROSS HX organism=Homo sapiens DNA sequence DA(P1):DT(T12) DG(P2):DC(T11) DT(P3):DA(T10) DG(P4):DC(T9) DT(P5):DA(T8) DG(P6):DC(T7) DA(P7):DT(T6) DG(P8):DC(T5) chainA (316) SER322 0 0 0 0 0 0 1 0 (372) LEU378 0 0 0 0 0 1 2 0 (376) ARG382 0 6 6 0 0 0 0 0 prot.sequence atgqdrvvalvdmdcffvqveqrqnphlrnkpcavvqykswkgggiiavsyearafgvtrsmwaddakklcpdlllaqvresrgkanltkyreasvevmeimsrfavierasideayvdltsavqerlqklqgqpisadllpstyieglpqgptvqkegmrkqglfqwldslqidnltspdlqltvgaviveemraaieretgfqcsagishnkvlaklacglnkpnrqtlvshgsvpqlfsqmpirkirslggklgasvieilgieymgeltqftesqlqshfgekngswlyamcrgiehdpvkprqlpktigcSknfpgktalatreqvqwwllqlaqeleerltkdrndndrvatqlvvsirvqgdkrLsslRrccaltrydahkmshdaftvikncntsgiqtewsppltmlflcatkfsas >8smh_F:"Winged_helix"_DNA-binding_domain; title=CHIMERIC ETS-DOMAIN OF MURINE PU.1 HARBORING THE CORRESPONDING BETA- STRAND 3 (S3) RESIDUES FROM MURINE ETS-1 IN COMPLEX WITH D(AATAAGCGGAAGTGGG) organism=Mus musculus DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DG(C6):DC(D28) DC(C7):DG(D27) DG(C8):DC(D26) DG(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DG(C12):DC(D22) DT(C13):DA(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLN226 0 0 0 0 3 2 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 13 15 10 0 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) ARG233 0 0 0 0 3 4 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 1 2 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgiihktakkkltyqfsgevlgr >8smj_F:"Winged_helix"_DNA-binding_domain; title=CHIMERIC ETS-DOMAIN OF MURINE PU.1 HARBORING THE CORRESPONDING BETA- STRAND 3 (S3) RESIDUES FROM MURINE ETS-1 IN COMPLEX WITH D(AATAAGCGGAATGGGG) organism=Mus musculus DNA sequence DC(D18):DG(C16) DC(D19):DG(C15) DC(D20):DG(C14) DC(D21):DG(C13) DA(D22):DT(C12) DT(D23):DA(C11) DT(D24):DA(C10) DC(D25):DG(C9) DC(D26):DG(C8) DG(D27):DC(C7) DC(D28):DG(C6) DT(D29):DA(C5) DT(D30):DA(C4) DA(D31):DT(C3) chainF ( 58) GLN226 0 0 0 0 0 0 0 0 2 3 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 0 10 15 13 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 0 0 0 0 4 3 0 0 0 0 ( 66) ASN234 0 0 0 0 0 1 0 0 0 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgiihktakkkltyqfsgevlgr >8sp0_AB:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=SYMMETRIC DIMER OF MAPSPARTA BOUND WITH GRNA/TDNA HYBRID organism=? DNA sequence DC(H4) DT(H5) DA(H6) DA(H7) DT(H8) DA(H9) DG(H10) DA(H11) DT(H12) DT(H13) DA(H14) DG(H15) DA(H16) DG(H17) DC(H18) DC(H19) DG(H20) DT(H21) DC(H22) DA(H23) chainA (262) ARG263 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 (361) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (365) LYS366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 chainB (209) LYS247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (397) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgKnwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8sp0_E:Toll/Interleukin_receptor_TIR_domain; title=SYMMETRIC DIMER OF MAPSPARTA BOUND WITH GRNA/TDNA HYBRID organism=? DNA sequence DC(D4) DT(D5) DA(D6) DA(D7) DT(D8) DA(D9) DG(D10) DA(D11) DT(D12) DT(D13) DA(D14) DG(D15) DA(D16) DG(D17) DC(D18) DC(D19) DG(D20) DT(D21) DC(D22) DA(D23) chainE (262) ARG263 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 (361) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe >8sp0_EF:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=SYMMETRIC DIMER OF MAPSPARTA BOUND WITH GRNA/TDNA HYBRID organism=? DNA sequence DC(D4) DT(D5) DA(D6) DA(D7) DT(D8) DA(D9) DG(D10) DA(D11) DT(D12) DT(D13) DA(D14) DG(D15) DA(D16) DG(D17) DC(D18) DC(D19) DG(D20) DT(D21) DC(D22) DA(D23) chainE (262) ARG263 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 (361) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 chainF ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfskieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8sp1_F:"Winged_helix"_DNA-binding_domain; title=CHIMERIC ETS-DOMAIN OF MURINE PU.1 HARBORING THE CORRESPONDING BETA- STRAND 3 (S3) RESIDUES FROM MURINE ETS-1 IN COMPLEX WITH D(AATAAGCGIAAGTGGG) organism=Mus musculus DNA sequence DC(D18):DG(C16) DC(D19):DG(C15) DC(D20):DG(C14) DA(D21):DT(C13) DC(D22):DG(C12) DT(D23):DA(C11) DT(D24):DA(C10) DC(D25):DI(C9) DC(D26):DG(C8) DG(D27):DC(C7) DC(D28):DG(C6) DT(D29):DA(C5) DT(D30):DA(C4) DA(D31):DT(C3) chainF ( 58) GLN226 0 0 0 0 0 0 0 0 2 2 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 6 0 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 0 11 16 13 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 1 0 0 0 0 0 0 0 0 ( 65) ARG233 0 0 0 0 0 0 0 0 4 3 0 0 0 0 ( 66) ASN234 0 0 0 0 2 1 0 0 0 0 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgiihktakkkltyqfsgevlgr >8sp3_AB:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=ASYMMETRIC DIMER OF MAPSPARTA BOUND WITH GRNA/TDNA HYBRID organism=? DNA sequence DC(D4) DT(D5) DA(D6) DA(D7) DT(D8) DA(D9) DG(D10) DA(D11) DT(D12) DT(D13) DA(D14) DG(D15) DA(D16) DG(D17) DC(D18) DC(D19) DG(D20) DT(D21) DC(D22) DA(D23) chainA (262) ARG263 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 (361) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 chainB (209) LYS247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8sp3_B:Ribonuclease_H-like; title=ASYMMETRIC DIMER OF MAPSPARTA BOUND WITH GRNA/TDNA HYBRID organism=? DNA sequence DC(D4) DT(D5) DA(D6) DA(D7) DT(D8) DA(D9) DG(D10) DA(D11) DT(D12) DT(D13) DA(D14) DG(D15) DA(D16) DG(D17) DC(D18) DC(D19) DG(D20) DT(D21) DC(D22) DA(D23) chainB (209) LYS247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 prot.sequence mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8sp3_EF:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=ASYMMETRIC DIMER OF MAPSPARTA BOUND WITH GRNA/TDNA HYBRID organism=? DNA sequence DC(H4) DT(H5) DA(H6) DA(H7) DT(H8) DA(H9) DG(H10) DA(H11) DT(H12) DT(H13) DA(H14) DG(H15) DA(H16) DG(H17) DC(H18) DC(H19) DG(H20) DT(H21) DC(H22) DA(H23) chainE (262) ARG263 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (357) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 chainF ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrrrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfskieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8spo_A:Toll/Interleukin_receptor_TIR_domain; title=TETRAMERIZED ACTIVATION OF MAPSPARTA BOUND WITH NAD+ organism=? DNA sequence DA(D6) DA(D7) DT(D8) DA(D9) DG(D10) DA(D11) DT(D12) DT(D13) DA(D14) DG(D15) DA(D16) DG(D17) DC(D18) DC(D19) DG(D20) DT(D21) DC(D22) DA(D23) chainA (262) ARG263 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) HIS358 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 (349) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlemlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe >8spo_AB:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=TETRAMERIZED ACTIVATION OF MAPSPARTA BOUND WITH NAD+ organism=? DNA sequence DA(D6) DA(D7) DT(D8) DA(D9) DG(D10) DA(D11) DT(D12) DT(D13) DA(D14) DG(D15) DA(D16) DG(D17) DC(D18) DC(D19) DG(D20) DT(D21) DC(D22) DA(D23) chainA (262) ARG263 0 0 0 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (345) HIS358 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 (349) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainB (209) LYS247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 (397) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlemlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8spo_EF:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=TETRAMERIZED ACTIVATION OF MAPSPARTA BOUND WITH NAD+ organism=? DNA sequence DC(H4) DT(H5) DA(H6) DA(H7) DT(H8) DA(H9) DG(H10) DA(H11) DT(H12) DT(H13) DA(H14) DG(H15) DA(H16) DG(H17) DC(H18) DC(H19) DG(H20) DT(H21) DC(H22) DA(H23) chainE (223) ARG263 0 0 0 0 0 11 3 0 0 0 0 0 0 0 0 0 0 0 0 0 (318) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 chainF (209) LYS247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 (290) TYR328 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflviekeeiydsnwlsilsfpeelrvreltfpavryknylctiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrrrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8spo_IL:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=TETRAMERIZED ACTIVATION OF MAPSPARTA BOUND WITH NAD+ organism=? DNA sequence DC(K4) DT(K5) DA(K6) DA(K7) DT(K8) DA(K9) DG(K10) DA(K11) DT(K12) DT(K13) DA(K14) DG(K15) DA(K16) DG(K17) DC(K18) DC(K19) DG(K20) DT(K21) DC(K22) DA(K23) chainI (214) ARG263 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (309) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 (313) ARG362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 chainL (209) LYS247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 (290) TYR328 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqeiydsnwlsilsfpeelrvreltfpavryknylctfipteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8spo_MN:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=TETRAMERIZED ACTIVATION OF MAPSPARTA BOUND WITH NAD+ organism=? DNA sequence DT(P8) DA(P9) DG(P10) DA(P11) DT(P12) DT(P13) DA(P14) DG(P15) DA(P16) DG(P17) DC(P18) DC(P19) DG(P20) DT(P21) DC(P22) DA(P23) chainM (237) ARG263 0 10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (332) HIS358 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 chainN ( 72) ARG72 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 prot.sequence rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfhevreltfpavryknylctfawaydtiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrrrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfskieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8sps_G:Histone-fold; title=HIGH RESOLUTION STRUCTURE OF ESRRB NUCLEOSOME BOUND OCT4 AT SITE A AND SITE B organism=? DNA sequence DG(J3):DC(I166) DT(J4):DA(I165) DG(J5):DC(I164) DC(J6):DG(I163) DT(J7):DA(I162) DG(J8):DC(I161) DA(J9):DT(I160) DT(J10):DA(I159) DT(J11):DA(I158) DC(J12):DG(I157) DC(J13):DG(I156) DC(J14):DG(I155) DT(J15):DA(I154) DC(J16):DG(I153) DC(J17):DG(I152) DT(J19):DT(I151) DT(J20):DA(I150) DC(J21):DG(I148) DG(J22):DC(I147) DC(J23):DG(I146) DT(J24):DA(I145) DC(J25):DG(I144) DT(J26):DA(I143) DG(J27):DC(I142) DC(J28):DG(I141) DA(J29):DT(I140) DT(J30):DA(I139) DA(J31):DT(I138) DA(J32):DT(I137) DC(J33):DG(I136) DT(J34):DA(I135) DA(J35):DT(I134) DT(J36):DA(I133) DC(J37):DG(I132) DA(J38):DT(I131) DC(J39):DG(I130) DT(J40):DA(I129) DT(J41):DA(I128) DT(J42):DA(I127) DC(J43):DG(I126) DT(J44):DA(I125) DG(J45):DC(I124) DG(J46):DC(I123) DA(J47):DT(I122) DA(J48):DT(I121) DC(J49):DG(I120) DT(J50):DA(I119) DC(J51):DG(I118) DC(J52):DG(I117) DA(J53):DT(I116) DT(J54):DA(I115) DG(J55):DC(I114) DG(J56):DC(I113) DT(J57):DA(I112) DC(J58):DG(I111) DT(J59):DA(I110) DC(J60):DG(I109) DC(J61):DG(I108) DT(J62):DA(I107) DA(J63):DT(I106) DG(J64):DC(I105) DG(J65):DC(I104) DT(J66):DA(I103) DC(J67):DG(I102) DG(J68):DC(I101) DC(J69):DG(I100) DC(J70):DG(I99) DA(J71):DT(I98) DG(J72):DC(I97) DG(J73):DC(I96) DC(J74):DG(I95) DC(J75):DG(I94) DT(J76):DA(I93) DT(J77):DA(I92) DT(J78):DA(I91) DG(J79):DC(I90) DC(J80):DG(I89) DT(J81):DA(I88) DT(J82):DA(I87) DT(J83):DA(I86) DG(J84):DC(I85) DC(J85):DG(I84) DA(J86):DT(I83) DG(J87):DC(I82) DC(J88):DG(I81) DT(J89):DA(I80) DT(J90):DA(I79) DA(J91):DT(I78) DG(J92):DC(I77) DA(J93):DT(I76) DA(J94):DT(I75) DC(J95):DG(I74) DA(J96):DT(I73) DG(J97):DC(I72) DA(J98):DT(I71) DC(J99):DG(I70) DT(J100):DA(I69) DC(J101):DG(I68) DT(J102):DA(I67) DC(J103):DG(I66) DT(J104):DA(I65) DA(J105):DT(I64) DT(J106):DA(I63) DG(J107):DC(I62) DC(J108):DG(I61) DT(J109):DA(I60) DC(J110):DG(I59) DC(J111):DG(I58) DC(J112):DG(I57) DT(J113):DA(I56) DC(J114):DG(I55) DC(J115):DG(I54) DA(J116):DT(I53) DC(J117):DG(I52) DC(J118):DG(I51) DT(J120):DG(I50) DC(J121):DA(I49) DT(J122):DA(I47) DG(J123):DC(I46) DT(J124):DA(I45) DT(J125):DA(I44) DT(J126):DA(I43) DC(J127):DG(I42) DC(J129):DG(I40) DC(J130):DG(I39) DA(J131):DT(I38) DG(J132):DC(I37) DG(J133):DC(I36) DT(J134):DA(I35) DC(J135):DG(I34) DC(J136):DG(I33) DC(J137):DG(I32) DA(J138):DT(I31) DC(J139):DG(I30) DA(J140):DT(I29) DT(J141):DA(I28) DG(J142):DC(I27) DG(J143):DC(I26) DG(J144):DC(I25) DG(J145):DC(I24) DA(J146):DT(I23) DG(J147):DC(I22) DG(J148):DC(I21) chainG ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence akaksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk >8squ_A: title=MONOMERIC MAPSPARTA BOUND WITH GUIDE RNA AND TARGET DNA HYBRID organism=? DNA sequence DC(D4) DT(D5) DA(D6) DA(D7) DT(D8) DA(D9) DG(D10) DA(D11) DT(D12) DT(D13) DA(D14) DG(D15) DA(D16) DG(D17) DC(D18) DC(D19) DG(D20) DT(D21) DC(D22) DA(D23) chainA (215) ARG263 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 prot.sequence rnkifpddndftrwlalkliglgyevwcdilfldkgdfwsniekviredtckflregvlkelavaakvkkqlkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrrrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe >8squ_AB:Toll/Interleukin_receptor_TIR_domain;Ribonuclease_H-like; title=MONOMERIC MAPSPARTA BOUND WITH GUIDE RNA AND TARGET DNA HYBRID organism=? DNA sequence DC(D4) DT(D5) DA(D6) DA(D7) DT(D8) DA(D9) DG(D10) DA(D11) DT(D12) DT(D13) DA(D14) DG(D15) DA(D16) DG(D17) DC(D18) DC(D19) DG(D20) DT(D21) DC(D22) DA(D23) chainA (215) ARG263 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (310) HIS358 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 chainB (205) ARG243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 (206) ASP244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (209) LYS247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 (353) THR391 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 (397) MET435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence rnkifpddndftrwlalkliglgyevwcdilfldkgdfwsniekviredtckflregvlkelavaakvkkqlkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrrrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe/mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpiRDfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtiskTkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi >8sro_AC: title=FOXP3 TETRAMER ON TTTG REPEATS organism=? DNA sequence DT(I25):DA(J30) DT(I26):DA(J29) DG(I27):DC(J28) DT(I28):DA(J27) DT(I29):DA(J26) DT(I30):DA(J25) DG(I31):DC(J24) DT(I32):DA(J23) DT(I33):DA(J22) DT(I34):DA(J21) DG(I35):DC(J20) DT(I36):DA(J19) DT(I37):DA(J18) DT(I38):DA(J17) DG(I39):DC(J16) DT(I40):DA(J15) DT(I41):DA(J14) chainA ( 58) ASN383 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ARG386 0 14 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) HIS387 0 0 0 0 8 11 6 0 0 0 0 0 0 0 0 0 0 ( 65) SER390 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) LEU391 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 chainC ( 57) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 ( 60) ARG386 0 0 0 0 0 0 0 0 0 10 6 2 0 0 0 0 0 ( 61) HIS387 0 0 0 0 0 0 0 0 0 0 0 0 8 5 3 0 0 ( 64) SER390 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 ( 65) LEU391 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 prot.sequence hnmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe/nmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe >8sro_BD: title=FOXP3 TETRAMER ON TTTG REPEATS organism=? DNA sequence DT(E25):DA(F30) DT(E26):DA(F29) DG(E27):DC(F28) DT(E28):DA(F27) DT(E29):DA(F26) DT(E30):DA(F25) DG(E31):DC(F24) DT(E32):DA(F23) DT(E33):DA(F22) DT(E34):DA(F21) DG(E35):DC(F20) DT(E36):DA(F19) DT(E37):DA(F18) DT(E38):DA(F17) DG(E39):DC(F16) DT(E40):DA(F15) DT(E41):DA(F14) DT(E42):DA(F13) chainD ( 56) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 ( 59) ARG386 0 0 0 0 0 0 0 0 0 10 5 1 0 0 0 0 0 0 ( 60) HIS387 0 0 0 0 0 0 0 0 0 0 0 0 11 8 4 0 0 0 ( 63) SER390 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 ( 64) LEU391 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 chainB ( 61) ARG386 0 18 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) HIS387 0 0 0 0 10 12 5 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER390 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) LEU391 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hnmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRHnlSLhkcfvrvesekgavwtvdefe/mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe >8sro_D:"Winged_helix"_DNA-binding_domain; title=FOXP3 TETRAMER ON TTTG REPEATS organism=? DNA sequence DA(F13):DT(E42) DA(F14):DT(E41) DA(F15):DT(E40) DC(F16):DG(E39) DA(F17):DT(E38) DA(F18):DT(E37) DA(F19):DT(E36) DC(F20):DG(E35) DA(F21):DT(E34) DA(F22):DT(E33) DA(F23):DT(E32) DC(F24):DG(E31) DA(F25):DT(E30) DA(F26):DT(E29) DA(F27):DT(E28) DC(F28):DG(E27) DA(F29):DT(E26) DA(F30):DT(E25) chainD ( 56) ASN383 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG386 0 0 0 0 0 0 1 5 10 0 0 0 0 0 0 0 0 0 ( 60) HIS387 0 0 0 4 8 11 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) SER390 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 ( 64) LEU391 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe >8srp_ACFHI: title=FOXP3 FORMS LADDER-LIKE MULTIMER TO BRIDGE TTTG REPEATS organism=? DNA sequence DA(L2):DT(K53) DA(L3):DT(K52) DC(L4):DG(K51) DA(L5):DT(K50) DA(L6):DT(K49) DA(L7):DT(K48) DC(L8):DG(K47) DA(L9):DT(K46) DA(L10):DT(K45) DA(L11):DT(K44) DC(L12):DG(K43) DA(L13):DT(K42) DA(L14):DT(K41) DA(L15):DT(K40) DC(L16):DG(K39) DA(L17):DT(K38) DA(L18):DT(K37) DA(L19):DT(K36) DC(L20):DG(K35) DA(L21):DT(K34) DA(L22):DT(K33) DA(L23):DT(K32) DC(L24):DG(K31) DA(L25):DT(K30) DA(L26):DT(K29) DA(L27):DT(K28) DC(L28):DG(K27) DA(L29):DT(K26) DA(L30):DT(K25) DA(L31):DT(K24) DC(L32):DG(K23) DA(L33):DT(K22) DA(L34):DT(K21) DA(L35):DT(K20) DC(L36):DG(K19) DA(L37):DT(K18) DA(L38):DT(K17) DA(L39):DT(K16) DC(L40):DG(K15) DA(L41):DT(K14) DA(L42):DT(K13) DA(L43):DT(K12) DC(L44):DG(K11) DA(L45):DT(K10) DA(L46):DT(K9) DA(L47):DT(K8) DC(L48):DG(K7) DA(L49):DT(K6) DA(L50):DT(K5) DA(L51):DT(K4) DC(L52):DG(K3) DA(L53):DT(K2) DA(L54):DT(K1) chainA ( 57) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) HIS387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 18 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LEU391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainI ( 59) ARG386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainH ( 56) ASN383 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) ARG386 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) HIS387 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 59) ARG386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) HIS387 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) SER390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LEU391 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 55) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) ARG386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) HIS387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 11 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) SER390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) LEU391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe/dyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe/mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRHnlSLhkcfvrvesekgavwtvdefe/mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlslhkcfvrvesekgavwtvdefe/mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRhnlslhkcfvrvesekgavwtvdef >8srp_BDEGJ: title=FOXP3 FORMS LADDER-LIKE MULTIMER TO BRIDGE TTTG REPEATS organism=? DNA sequence DT(M1):DA(N54) DT(M2):DA(N53) DG(M3):DC(N52) DT(M4):DA(N51) DT(M5):DA(N50) DT(M6):DA(N49) DG(M7):DC(N48) DT(M8):DA(N47) DT(M9):DA(N46) DT(M10):DA(N45) DG(M11):DC(N44) DT(M12):DA(N43) DT(M13):DA(N42) DT(M14):DA(N41) DG(M15):DC(N40) DT(M16):DA(N39) DT(M17):DA(N38) DT(M18):DA(N37) DG(M19):DC(N36) DT(M20):DA(N35) DT(M21):DA(N34) DT(M22):DA(N33) DG(M23):DC(N32) DT(M24):DA(N31) DT(M25):DA(N30) DT(M26):DA(N29) DG(M27):DC(N28) DT(M28):DA(N27) DT(M29):DA(N26) DT(M30):DA(N25) DG(M31):DC(N24) DT(M33):DA(N22) DT(M34):DA(N21) DG(M35):DC(N20) DT(M36):DA(N19) DT(M37):DA(N18) DT(M38):DA(N17) DG(M39):DC(N16) DT(M40):DA(N15) DT(M41):DA(N14) DT(M42):DA(N13) DG(M43):DC(N12) DT(M44):DA(N11) DT(M45):DA(N10) DT(M46):DA(N9) DG(M47):DC(N8) DT(M48):DA(N7) DT(M49):DA(N6) DT(M50):DA(N5) DG(M51):DC(N4) DT(M52):DA(N3) DT(M53):DA(N2) DT(M54):DA(N1) chainJ ( 59) ARG386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 60) HIS387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 63) SER390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 ( 64) LEU391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 chainG ( 60) HIS387 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) SER390 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) LEU391 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 59) ARG386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 63) SER390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 57) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) ARG386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) HIS387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 9 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) SER390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) LEU391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 58) ASN383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) ARG386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) HIS387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 11 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 65) SER390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) LEU391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hnmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe/nmdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwkNaiRHnlSLhkcfvrvesekgavwtvdefe/mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRhnlSlhkcfvrvesekgavwtvdef/mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknairHnlSLhkcfvrvesekgavwtvdef/mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRHnlSLhkcfvrvesekgavwtvdef >8srp_J:"Winged_helix"_DNA-binding_domain; title=FOXP3 FORMS LADDER-LIKE MULTIMER TO BRIDGE TTTG REPEATS organism=? DNA sequence DT(M1):DA(N54) DT(M2):DA(N53) DG(M3):DC(N52) DT(M4):DA(N51) DT(M5):DA(N50) DT(M6):DA(N49) DG(M7):DC(N48) DT(M8):DA(N47) DT(M9):DA(N46) DT(M10):DA(N45) DG(M11):DC(N44) DT(M12):DA(N43) DT(M13):DA(N42) DT(M14):DA(N41) DG(M15):DC(N40) DT(M16):DA(N39) DT(M17):DA(N38) DT(M18):DA(N37) DG(M19):DC(N36) DT(M20):DA(N35) DT(M21):DA(N34) DT(M22):DA(N33) DG(M23):DC(N32) DT(M24):DA(N31) DT(M25):DA(N30) DT(M26):DA(N29) DG(M27):DC(N28) DT(M28):DA(N27) DT(M29):DA(N26) DT(M30):DA(N25) DG(M31):DC(N24) DT(M33):DA(N22) DT(M34):DA(N21) DG(M35):DC(N20) DT(M36):DA(N19) DT(M37):DA(N18) DT(M38):DA(N17) DG(M39):DC(N16) DT(M40):DA(N15) DT(M41):DA(N14) DT(M42):DA(N13) DG(M43):DC(N12) DT(M44):DA(N11) DT(M45):DA(N10) DT(M46):DA(N9) DG(M47):DC(N8) DT(M48):DA(N7) DT(M49):DA(N6) DT(M50):DA(N5) DG(M51):DC(N4) DT(M52):DA(N3) DT(M53):DA(N2) DT(M54):DA(N1) chainJ ( 59) ARG386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 ( 60) HIS387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 ( 63) SER390 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 ( 64) LEU391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 prot.sequence mdyfkyhnmrppftyatlirwaileaperqrtlneiyhwftrmfayfrnhpatwknaiRHnlSLhkcfvrvesekgavwtvdef >8ssq_A:beta-beta-alpha_zinc_fingers; title=ZNFS 3-11 OF CCCTC-BINDING FACTOR (CTCF) COMPLEXED WITH 35MER DNA 35- 4 organism=Homo sapiens DNA sequence DG(C1):DC(B35) DT(C2):DA(B34) DG(C3):DC(B33) DC(C4):DG(B32) DA(C5):DT(B31) DG(C6):DC(B30) DT(C7):DA(B29) DA(C8):DT(B28) DC(C9):DG(B27) DC(C10):DG(B26) DA(C11):DT(B25) DC(C12):DG(B24) DA(C13):DT(B23) DT(C14):DA(B22) DT(C15):DA(B21) DT(C16):DA(B20) DA(C17):DT(B19) DA(C18):DT(B18) DC(C19):DG(B17) DC(C20):DG(B16) DA(C21):DT(B15) DG(C22):DC(B14) DC(C23):DG(B13) DA(C24):DT(B12) DG(C25):DC(B11) DG(C26):DC(B10) DG(C27):DC(B9) DG(C28):DC(B8) DG(C29):DC(B7) DC(C30):DG(B6) DG(C31):DC(B5) DC(C32):DG(B4) DT(C33):DA(B3) DA(C34):DT(B2) DA(C35):DT(B1) chainA ( 15) THR333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 18) GLU336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 ( 21) ARG339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 15 3 0 0 0 ( 25) TYR343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 ( 44) GLU362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 11 1 0 0 0 0 ( 46) SER364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 47) LYS365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 3 0 0 0 0 0 ( 50) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 15 2 0 0 0 0 0 0 ( 74) TYR392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 10 0 0 0 0 0 0 0 ( 75) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 2 0 0 0 0 0 0 0 0 ( 78) ARG396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 11 1 0 0 0 0 0 0 0 0 0 (100) GLN418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 11 0 0 0 0 0 0 0 0 0 0 0 (103) THR421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 (130) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) SER450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 0 0 0 0 0 0 0 0 0 (133) ASP451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) GLN506 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) ARG508 0 0 0 0 0 0 0 4 11 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (191) HIS509 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (194) MET512 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (216) GLN534 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (218) GLN536 0 0 0 0 0 6 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (219) LEU537 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (247) THR565 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (248) ARG566 0 9 9 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) ASN568 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence trphkcpdcdmafvtsgelvRhrrykhthekpfkcsmcdyasvevsKlkRhirshtgerpfqcslcsyasrdtyKlkRhmrthsgekpyecyicharftQsgtmkmhilqkhtenvakfhcphcdtviarksDlgVhlrkqhsyieqgkkcrycdavfheryaliqhqkshknekrfkcdqcdyacrqeRhmimhkrthtgekpyacshcdktfrqkQlldmhfkryhdpnfvpaafvcskcgktftRrntmarhadnca >8ssr_A:beta-beta-alpha_zinc_fingers; title=ZNFS 3-11 OF CCCTC-BINDING FACTOR (CTCF) COMPLEXED WITH 35MER DNA 35- 20 organism=Homo sapiens DNA sequence DT(B1):DA(C35) DT(B2):DA(C34) DA(B3):DT(C33) DG(B4):DC(C32) DC(B5):DG(C31) DG(B6):DC(C30) DC(B7):DG(C29) DC(B8):DG(C28) DA(B9):DT(C27) DC(B10):DG(C26) DC(B11):DG(C25) DT(B12):DA(C24) DG(B13):DC(C23) DC(B14):DG(C22) DT(B15):DA(C21) DG(B16):DC(C20) DG(B17):DC(C19) DT(B18):DA(C18) DT(B19):DA(C17) DA(B20):DT(C16) DA(B21):DT(C15) DA(B22):DT(C14) DT(B23):DA(C13) DG(B24):DC(C12) DT(B25):DA(C11) DG(B26):DC(C10) DG(B27):DC(C9) DT(B28):DA(C8) DA(B29):DT(C7) DC(B30):DG(C6) DT(B31):DA(C5) DG(B32):DC(C4) DC(B33):DG(C3) DA(B34):DT(C2) DC(B35):DG(C1) chainA ( 18) GLU336 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) ARG339 0 0 0 3 17 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 25) TYR343 0 0 0 0 0 3 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) GLU362 0 0 0 0 2 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) LYS365 0 0 0 0 0 3 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 50) ARG368 0 0 0 0 0 0 0 13 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 74) TYR392 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) LYS393 0 0 0 0 0 0 0 0 0 7 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 78) ARG396 0 0 0 0 0 0 0 0 0 1 9 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (100) GLN418 0 0 0 0 0 0 0 0 0 0 0 8 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (103) THR421 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) SER450 0 0 0 0 0 0 0 0 0 0 0 0 3 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (133) ASP451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (136) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) GLN506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 0 0 0 0 0 0 0 0 0 (190) ARG508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 10 5 0 0 0 0 0 0 0 (191) HIS509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 (194) MET512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 (216) GLN534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 (218) GLN536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 (219) LEU537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 (248) ARG566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 12 10 0 prot.sequence trphkcpdcdmafvtsgElvRhrrYkhthekpfkcsmcdyasvEvsKlkRhirshtgerpfqcslcsyasrdtYKlkRhmrthsgekpyecyicharftQsgTmkmhilqkhtenvakfhcphcdtviaRkSDlgVhlrkqhsyieqgkkcrycdavfheryaliqhqkshknekrfkcdqcdyacrQeRHmiMhkrthtgekpyacshcdktfrQkQLldmhfkryhdpnfvpaafvcskcgktftRrntmarhadnca >8sss_A:beta-beta-alpha_zinc_fingers; title=ZNFS 1-7 OF CCCTC-BINDING FACTOR (CTCF) COMPLEXED WITH 23MER organism=Homo sapiens DNA sequence DG(C1):DC(B23) DC(C2):DG(B22) DC(C3):DG(B21) DA(C4):DT(B20) DG(C5):DC(B19) DC(C6):DG(B18) DA(C7):DT(B17) DG(C8):DC(B16) DG(C9):DC(B15) DG(C10):DC(B14) DG(C11):DC(B13) DG(C12):DC(B12) DC(C13):DG(B11) DG(C14):DC(B10) DC(C15):DG(B9) DT(C16):DA(B8) DA(C17):DT(B7) DG(C18):DC(B6) DT(C19):DA(B5) DG(C20):DC(B4) DA(C21):DT(B3) DG(C22):DC(B2) DG(C23):DC(B1) chainA ( 13) ARG277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 16 4 ( 15) SER279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ( 16) ASN280 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 0 0 ( 19) ARG283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 10 4 0 0 ( 44) LEU308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 69) THR333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 70) SER334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 ( 72) GLU336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 ( 75) ARG339 0 0 0 0 0 0 0 0 0 0 0 0 19 13 5 0 0 0 0 0 0 0 0 ( 79) TYR343 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 ( 98) GLU362 0 0 0 0 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 0 0 0 0 (101) LYS365 0 0 0 0 0 0 0 0 0 0 8 11 1 0 0 0 0 0 0 0 0 0 0 (104) ARG368 0 0 0 0 0 0 0 0 0 18 11 0 0 0 0 0 0 0 0 0 0 0 0 (126) ASP390 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (128) TYR392 0 0 0 0 0 0 0 0 0 3 21 0 0 0 0 0 0 0 0 0 0 0 0 (129) LYS393 0 0 0 0 0 0 0 4 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 (132) ARG396 0 0 0 0 0 0 16 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (154) GLN418 0 0 0 0 0 18 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (157) THR421 0 0 0 2 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (184) ARG448 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) SER450 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (187) ASP451 0 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (190) VAL454 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tfqcelcsytcpRrSNldRhmkshtderphkchlcgrafrtvtLlrnhlnthtgtrphkcpdcdmafvTSgElvRhrrYkhthekpfkcsmcdyasvEvsKlkRhirshtgerpfqcslcsyasrDtYKlkRhmrthsgekpyecyicharftQsgTmkmhilqkhtenvakfhcphcdtviaRkSDlgVhlrkqhs >8sst_D:beta-beta-alpha_zinc_fingers; title=ZNFS 1-7 OF CCCTC-BINDING FACTOR (CTCF) K365T MUTANT COMPLEXED WITH 23MER organism=Homo sapiens DNA sequence DC(E1):DG(F23) DC(E2):DG(F22) DT(E3):DA(F21) DC(E4):DG(F20) DA(E5):DT(F19) DC(E6):DG(F18) DT(E7):DA(F17) DA(E8):DT(F16) DG(E9):DC(F15) DC(E10):DG(F14) DG(E11):DC(F13) DC(E12):DG(F12) DC(E13):DG(F11) DC(E14):DG(F10) DC(E15):DG(F9) DC(E16):DG(F8) DT(E17):DA(F7) DG(E18):DC(F6) DC(E19):DG(F5) DT(E20):DA(F4) DG(E21):DC(F3) DG(E22):DC(F2) DC(E23):DG(F1) chainD ( 13) ARG277 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 16) ASN280 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) ARG283 0 0 2 13 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) LEU308 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) THR333 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) SER334 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 72) GLU336 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 75) ARG339 0 0 0 0 0 0 0 0 4 12 17 0 0 0 0 0 0 0 0 0 0 0 0 ( 79) TYR343 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 ( 98) GLU362 0 0 0 0 0 0 0 0 0 1 6 1 0 0 0 0 0 0 0 0 0 0 0 (104) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 11 19 0 0 0 0 0 0 0 0 0 (126) ASP390 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 (128) TYR392 0 0 0 0 0 0 0 0 0 0 0 0 7 11 0 0 0 0 0 0 0 0 0 (129) LYS393 0 0 0 0 0 0 0 0 0 0 0 0 0 7 10 1 0 0 0 0 0 0 0 (132) ARG396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 12 16 0 0 0 0 0 0 (154) GLN418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 13 0 0 0 0 0 (157) THR421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 1 0 0 0 (184) ARG448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 (186) SER450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 (187) ASP451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 7 0 (190) VAL454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence tfqcelcsytcpRrsNldRhmkshtderphkchlcgrafrtvtLlrnhlnthtgtrphkcpdcdmafvTSgElvRhrrYkhthekpfkcsmcdyasvEvstlkRhirshtgerpfqcslcsyasrDtYKlkRhmrthsgekpyecyicharftQsgTmkmhilqkhtenvakfhcphcdtviaRkSDlgVhlrkqhsy >8ssu_A:beta-beta-alpha_zinc_fingers; title=ZNFS 3-11 OF CCCTC-BINDING FACTOR (CTCF) COMPLEXED WITH 19MER DNA organism=? DNA sequence DA(C1):DT(B19) DG(C2):DC(B18) DG(C3):DC(B17) DA(C4):DT(B16) DC(C5):DG(B15) DC(C6):DG(B14) DA(C7):DT(B13) DG(C8):DC(B12) DC(C9):DG(B11) DA(C10):DT(B10) DG(C11):DC(B9) DG(C12):DC(B8) DG(C13):DC(B7) DG(C14):DC(B6) DG(C15):DC(B5) DC(C16):DG(B4) DG(C17):DC(B3) DC(C18):DG(B2) DA(C19):DT(B1) chainA ( 14) THR333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 ( 17) GLU336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 ( 20) ARG339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 7 5 ( 24) TYR343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 2 0 0 0 ( 43) GLU362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 9 6 0 0 ( 45) SER364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 ( 46) LYS365 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 6 0 0 0 ( 49) ARG368 0 0 0 0 0 0 0 0 0 0 0 0 17 10 0 0 0 0 0 ( 71) ASP390 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 ( 73) TYR392 0 0 0 0 0 0 0 0 0 0 0 0 7 13 0 0 0 0 0 ( 74) LYS393 0 0 0 0 0 0 0 0 0 0 5 11 3 0 0 0 0 0 0 ( 77) ARG396 0 0 0 0 0 0 0 0 0 14 12 2 0 0 0 0 0 0 0 ( 99) GLN418 0 0 0 0 0 0 0 0 14 10 0 0 0 0 0 0 0 0 0 (102) THR421 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 0 0 0 (129) ARG448 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) SER450 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 (132) ASP451 0 0 0 0 9 9 1 0 0 0 0 0 0 0 0 0 0 0 0 (135) VAL454 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rphkcpdcdmafvtsgElvRhrrykhthekpfkcsmcdyasvEvsKlkRhirshtgerpfqcslcsyasrdtyKlkRhmrthsgekpyecyicharftQsgtmkmhilqkhtenvakfhcphcdtviarksDlgVhlrkqhsyieqgkkcrycdavfheryaliqhqkshknekrfkcdqcdyacrqerhmimhkrthtgekpyacshcdktfrqkqlldmhfkryhdpnfvp >8sva_AFGT: title=STRUCTURE OF THE RHODOCOCCUS SP. USK13 DARR-20 BP DNA COMPLEX organism=? DNA sequence DA(D11):DT(B27) DG(D12):DC(B26) DA(D13):DT(B25) DT(D14):DA(B24) DA(D15):DT(B23) DC(D16):DG(B22) DT(D17):DA(B21) DC(D18):DG(B20) DC(D19):DG(B19) DG(D20):DC(B18) DG(D21):DC(B17) DA(D22):DT(B16) DG(D23):DC(B15) DT(D24):DA(B14) DA(D25):DT(B13) DT(D26):DA(B12) chainA ( 37) LYS44 0 0 0 0 0 0 0 0 7 9 1 0 0 0 0 0 ( 41) TYR48 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 ( 42) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 0 chainF ( 24) ILE33 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR48 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 36) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 ( 37) LYS44 0 0 0 0 0 0 0 0 0 0 0 1 5 2 0 0 ( 41) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 3 8 0 0 chainT ( 36) THR43 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS44 0 0 0 0 1 10 9 0 0 0 0 0 0 0 0 0 ( 41) TYR48 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 ( 42) TYR49 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence esdvkgrildaaadafmlrgfanttiddiaddvgatKgliYYhfrskfdiflavyedgmrrvrervepyvgapgtgrqrlvamsvahvenlmidlgyhhvvhqgvrdqastalkvrqrdalaalnelrrdyermfhhvitegiadgslrnvddalatrtllsnlnavdvwyrkiegqtekevhdlasqvvdlliggigat/dvkgrildaaadafmlrgfanttIddiaddvgatkgliYyhfrskfdiflavyedgmrrvrervepyvgapgtgrqrlvamsvahvenlmidlgyhhvvhqgvrdalkvrqrdalaalnelrrdyermfhhvitegiadgslrnvddalatrtllsnlnavdvwyrkiegqtekevhdlasqvvdlliggigat/esdvkgrildaaadafmlrgfanttiddiaddvgaTKgliYyhfrskfdiflavyedgmrrvrervepyvgapgtgrqrlvamsvahvenlmidlgyhhvvhqgqastalkvrqrdalaalnelrrdyermfhhvitegiadgslrnvddalatrtllsnlnavdvwyrkiegqtekevhdlasqvvdlliggigata/esdvkgrildaaadafmlrgfanttiddiaddvgaTKgliYYhfrskfdiflavyedgmrrvrervepyvgapgtgrqrlvamsvahvenlmidlgyhhvvhqgvrdqastalkvrqrdalaalnelrrdyermfhhvitegiadgslrnvddalatrtllsnlnavdvwyrkiegqtekevhdlasqvvdlliggiga >8sva_T:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF THE RHODOCOCCUS SP. USK13 DARR-20 BP DNA COMPLEX organism=? DNA sequence DA(B12):DT(D26) DT(B13):DA(D25) DA(B14):DT(D24) DC(B15):DG(D23) DT(B16):DA(D22) DC(B17):DG(D21) DC(B18):DG(D20) DG(B19):DC(D19) DG(B20):DC(D18) DA(B21):DT(D17) DG(B22):DC(D16) DT(B23):DA(D15) DA(B24):DT(D14) DT(B25):DA(D13) DC(B26):DG(D12) DT(B27):DA(D11) chainT ( 36) THR43 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 ( 37) LYS44 0 0 0 0 0 0 0 0 0 9 10 1 0 0 0 0 ( 41) TYR48 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 ( 42) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 prot.sequence esdvkgrildaaadafmlrgfanttiddiaddvgaTKgliYYhfrskfdiflavyedgmrrvrervepyvgapgtgrqrlvamsvahvenlmidlgyhhvvhqgvrdqastalkvrqrdalaalnelrrdyermfhhvitegiadgslrnvddalatrtllsnlnavdvwyrkiegqtekevhdlasqvvdlliggiga >8svd_AFGT: title=STRUCTURE OF M. BAIXIANGNINGIAE DARR-DNA COMPLEX REVEALS NOVEL DIMER- OF-DIMERS DNA BINDING organism=? DNA sequence DT(D13):DA(B27) DA(D14):DT(B26) DG(D15):DC(B25) DA(D16):DT(B24) DT(D17):DA(B23) DA(D18):DT(B22) DC(D19):DG(B21) DT(D20):DA(B20) DC(D21):DG(B19) DC(D22):DG(B18) DG(D23):DC(B17) DG(D24):DC(B16) DA(D25):DT(B15) DG(D26):DC(B14) DT(D27):DA(B13) DA(D28):DT(B12) DT(D29):DA(B11) DC(D30):DG(B10) DT(D31):DA(B9) chainA ( 34) THR43 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 ( 35) LYS44 0 0 0 0 0 0 0 0 0 4 8 2 0 0 0 0 0 0 0 ( 39) TYR48 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 ( 40) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 chainF ( 24) ILE33 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS44 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR48 0 0 9 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 36) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 ( 37) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 1 3 3 1 0 0 0 ( 41) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 ( 42) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 chainT ( 34) THR43 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS44 0 0 0 0 0 0 10 5 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR48 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR49 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dvkgrildaaadafmargfanttiddiadevgaTKgliYYhfrskfdiflavyedgmrrvrervephstapgtghqrleamsiahlenlmtelgyhhvvhqgvrhtalkvrqrdaltalnelrrdyermfrrviaegiadgslrrvdealatrtllsnlnavdvwyrkiegqtgeeirelasqvvdmligglad/dvkgrildaaadafmargfanttIddiadevgatKgliYyhfrskfdiflavyedgmrrvrervephstapgtghqrleamsiahlenlmtelgyhhvvhqgvrhqdstalkvrqrdaltalnelrrdyermfrrviaegiadgslrrvdealatrtllsnlnavdvwyrkiegqtgeeirelasqvvdmligglad/epdvkgrildaaadafmargfanttiddiadevgaTKgliYYhfrskfdiflavyedgmrrvrervephstapgtghqrleamsiahlenlmtelgyhhvvhqgdstalkvrqrdaltalnelrrdyermfrrviaegiadgslrrvdealatrtllsnlnavdvwyrkiegqtgeeirelasqvvdmligglad/dvkgrildaaadafmargfanttiddiadevgaTKgliYYhfrskfdiflavyedgmrrvrervephstapgtghqrleamsiahlenlmtelgyhhvvhqgvrhqdstalkvrqrdaltalnelrrdyermfrrviaegiadgslrrvdealatrtllsnlnavdvwyrkiegqtgeeirelasqvvdmligglad >8svd_EIJK: title=STRUCTURE OF M. BAIXIANGNINGIAE DARR-DNA COMPLEX REVEALS NOVEL DIMER- OF-DIMERS DNA BINDING organism=? DNA sequence DT(Q13):DA(M27) DA(Q14):DT(M26) DG(Q15):DC(M25) DA(Q16):DT(M24) DT(Q17):DA(M23) DA(Q18):DT(M22) DC(Q19):DG(M21) DT(Q20):DA(M20) DC(Q21):DG(M19) DC(Q22):DG(M18) DG(Q23):DC(M17) DG(Q24):DC(M16) DA(Q25):DT(M15) DG(Q26):DC(M14) DT(Q27):DA(M13) DA(Q28):DT(M12) DT(Q29):DA(M11) DC(Q30):DG(M10) DT(Q31):DA(M9) chainE ( 34) THR43 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 35) LYS44 0 0 0 0 0 0 0 0 0 6 12 0 0 0 0 0 0 0 0 ( 39) TYR48 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 ( 40) TYR49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 chainI ( 24) ILE33 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS44 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR48 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainJ ( 34) THR43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 ( 35) LYS44 0 0 0 0 0 0 0 0 0 0 0 0 2 5 2 1 0 0 0 ( 39) TYR48 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 chainK ( 34) THR43 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 35) LYS44 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 ( 39) TYR48 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) TYR49 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence dvkgrildaaadafmargfanttiddiadevgaTKgliYYhfrskfdiflavyedgmrrvrervephstapgtghqrleamsiahlenlmtelgyhhvvhqgvrhqdstalkvrqrdaltalnelrrdyermfrrviaegiadgslrrvdealatrtllsnlnavdvwyrkiegqtgeeirelasqvvdmligglad/dvkgrildaaadafmargfanttIddiadevgatKgliYyhfrskfdiflavyedgmrrvrervephstapgtghqrleamsiahlenlmtelgyhhvvhqgvtalkvrqrdaltalnelrrdyermfrrviaegiadgslrrvdealatrtllsnlnavdvwyrkiegqtgeeirelasqvvdmligglad/dvkgrildaaadafmargfanttiddiadevgaTKgliYyhfrskfdiflavyedgmrrvrervephstapgtghqrleamsiahlenlmtelgyhhvvhqgstalkvrqrdaltalnelrrdyermfrrviaegiadgslrrvdealatrtllsnlnavdvwyrkiegqtgeeirelasqvvdmliggla/dvkgrildaaadafmargfanttiddiadevgaTKgliYYhfrskfdiflavyedgmrrvrervephstapgtghqrleamsiahlenlmtelgyhhvvhqgvrhqdstalkvrqrdaltalnelrrdyermfrrviaegiadgslrrvdealatrtllsnlnavdvwyrkiegqtgeeirelasqvvdmligglad >8svd_G:Homeodomain-like;Tetracyclin_repressor-like,_C-terminal_domain; title=STRUCTURE OF M. BAIXIANGNINGIAE DARR-DNA COMPLEX REVEALS NOVEL DIMER- OF-DIMERS DNA BINDING organism=? DNA sequence DA(B9):DT(D31) DG(B10):DC(D30) DA(B11):DT(D29) DT(B12):DA(D28) DA(B13):DT(D27) DC(B14):DG(D26) DT(B15):DA(D25) DC(B16):DG(D24) DC(B17):DG(D23) DG(B18):DC(D22) DG(B19):DC(D21) DA(B20):DT(D20) DG(B21):DC(D19) DT(B22):DA(D18) DA(B23):DT(D17) DT(B24):DA(D16) DC(B25):DG(D15) DT(B26):DA(D14) DA(B27):DT(D13) chainG ( 36) THR43 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) LYS44 0 0 0 1 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) TYR48 0 0 0 0 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) TYR49 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence epdvkgrildaaadafmargfanttiddiadevgaTKgliYYhfrskfdiflavyedgmrrvrervephstapgtghqrleamsiahlenlmtelgyhhvvhqgdstalkvrqrdaltalnelrrdyermfrrviaegiadgslrrvdealatrtllsnlnavdvwyrkiegqtgeeirelasqvvdmligglad >8svf_A:Histone-fold; title=BAP1/ASXL1 BOUND TO THE H2AK119UB NUCLEOSOME organism=? DNA sequence DC(I21):DG(J177) DT(I22):A(b176) G(a23):C(b175) DG(I24):DC(J174) A(a25):DT(J173) DA(I26):DT(J172) DC(I27):DG(J171) DA(I28):DT(J170) DG(I29):DC(J169) DG(I30):DC(J168) DA(I31):DT(J167) DT(I32):DA(J166) DG(I33):DC(J165) DT(I34):DA(J164) DA(I35):DT(J163) DT(I36):DA(J162) DA(I37):DT(J161) DT(I38):DA(J160) DA(I39):DT(J159) DT(I40):DA(J158) DC(I41):DG(J157) DT(I42):DA(J156) DG(I43):DC(J155) DA(I44):DT(J154) DC(I45):DG(J153) DA(I46):DT(J152) DC(I47):DG(J151) DG(I48):DC(J150) DT(I49):DA(J149) DG(I50):DC(J148) DC(I51):DG(J147) DC(I52):DG(J146) DT(I53):DA(J145) DG(I54):DC(J144) DG(I55):DC(J143) DA(I56):DT(J142) DG(I57):DC(J141) DA(I58):DT(J140) DC(I59):DG(J139) DT(I60):DA(J138) DA(I61):DT(J137) DG(I62):DC(J136) DG(I63):DC(J135) DG(I64):DC(J134) DA(I65):DT(J133) DG(I66):DC(J132) DT(I67):DA(J131) DA(I68):DT(J130) DA(I69):DT(J129) DT(I70):DA(J128) DC(I71):DG(J127) DC(I72):DG(J126) DC(I73):DG(J125) DC(I74):DG(J124) DT(I75):DA(J123) DT(I76):DA(J122) DG(I77):DC(J121) DG(I78):DC(J120) DC(I79):DG(J119) DG(I80):DC(J118) DG(I81):DC(J117) DT(I82):DA(J116) DT(I83):DA(J115) DA(I84):DT(J114) DA(I85):DT(J113) DA(I86):DT(J112) DA(I87):DT(J111) DC(I88):DG(J110) DG(I89):DC(J109) DC(I90):DG(J108) DG(I91):DC(J107) DG(I92):DC(J106) DG(I93):DC(J105) DG(I94):DC(J104) DG(I95):DC(J103) DA(I96):DT(J102) DC(I97):DG(J101) DA(I98):DT(J100) DG(I99):DC(J99) DC(I100):DG(J98) DG(I101):DC(J97) DC(I102):DG(J96) DG(I103):DC(J95) DT(I104):DA(J94) DA(I105):DT(J93) DC(I106):DG(J92) DG(I107):DC(J91) DT(I108):DA(J90) DG(I109):DC(J89) DC(I110):DG(J88) DG(I111):DC(J87) DT(I112):DA(J86) DT(I113):DA(J85) DT(I114):DA(J84) DA(I115):DT(J83) DA(I116):DT(J82) DG(I117):DC(J81) DC(I118):DG(J80) DG(I119):DC(J79) DG(I120):DC(J78) DT(I121):DA(J77) DG(I122):DC(J76) DC(I123):DG(J75) DT(I124):DA(J74) DA(I125):DT(J73) DG(I126):DC(J72) DA(I127):DT(J71) DG(I128):DC(J70) DC(I129):DG(J69) DT(I130):DA(J68) DG(I131):DC(J67) DT(I132):DA(J66) DC(I133):DG(J65) DT(I134):DA(J64) DA(I135):DT(J63) DC(I136):DG(J62) DG(I137):DC(J61) DA(I138):DT(J60) DC(I139):DG(J59) DC(I140):DG(J58) DA(I141):DT(J57) DA(I142):DT(J56) DT(I143):DA(J55) DT(I144):DA(J54) DG(I145):DC(J53) DA(I146):DT(J52) DG(I147):DC(J51) DC(I148):DG(J50) DG(I149):DC(J49) DG(I150):DC(J48) DC(I151):DG(J47) DC(I152):DG(J46) DT(I153):DA(J45) DC(I154):DG(J44) DG(I155):DC(J43) DG(I156):DC(J42) DC(I157):DG(J41) DA(I158):DT(J40) DC(I159):DG(J39) DC(I160):DG(J38) DG(I161):DC(J37) DG(I162):DC(J36) DG(I163):DC(J35) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >8syi_CDGZ: title=CYANOBACTERIAL RNAP-EC organism=? DNA sequence DC(N4):DG(T37) DG(N5):DC(T36) DC(N6):DG(T35) DA(N7):DT(T34) DT(N8):DA(T33) DG(N9):DC(T32) DC(N10):DG(T31) DT(N11):DA(T30) DG(N12):DC(T29) DC(N13):DG(T28) DT(N14):DA(T27) DC(N15):DG(T26) DT(N16):DA(T25) DA(N17):DT(T24) DC(N18):DC(T23) DC(N19):DC(T22) DT(N20):DT(T21) DC(N21):DC(T20) DT(N22):DT(T19) DC(N23):DC(T18) DC(N24):DC(T17) DA(N25):DA(T16) DT(N26):DT(T15) DG(N27):DG(T14) DA(N28):DT(T13) DC(N29):DG(T12) DG(N30):DC(T11) DG(N31):DC(T10) DC(N32):DG(T9) DG(N33):DC(T8) DA(N34):DT(T7) DC(N35):DG(T6) DT(N36):DA(T5) DG(N37):DC(T4) DC(N38):DG(T3) DC(N39):DG(T2) DC(N40):DG(T1) chainC (119) ARG130 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (148) TRP159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) ASP175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (242) ARG253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) ILE306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) ASP307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (301) ARG312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (323) ARG334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (388) LEU399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (391) GLU402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 0 0 (392) ARG403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (397) VAL408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD (257) LEU261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) ARG276 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (428) ALA432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) PRO433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainZ (195) THR197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) ALA198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 11) ALA29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 12) SER30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 87) ILE105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence fhlpdlvaiqrnsfrwfleeglieelesfspitdytgklelhflgkqyklkrpkydvdeakrrdgtysvqmyvptrlinketgeikeqevfigdlplmtdrgtfiingaervivnqivRspgvyykserdkngrlthnaslipnrgaWlkfetdknglvwvriDktrklsaqvllkalglsdneiydklrhpeyyqktidkegqfsedealmelyrklrpgepptvsggqqllesrffdpkRydlgrvgryklnkklglnvadtvrtltsedilaaidylinleldlggcevddIDhlgnRrvrsvgellqnqvrvglnrleRiirermtvsdsdslspaslvnpkplvaaikeffgssqlsqfmdqtnplaelthkrrlsalgpggLtrERagfaVrdihpshygricpietpegpnagligslatharvndygfietpfwrveegrvrkdlapvymtadqeddlrvapgdvatddagyilgttipvryrqdfttttpervdyvalspvqiisvatslipflehddanralmgsnmqrqavpllrperplvgtglepqaardsgmvitspvdgtisyvdathievtadtgekygyalqkyqrsnqdtclnqrpivfegdrvqrgqviadgsatekgelalgqnilvaympwegynyedailiserlvyddvytsihiekfeiearqtklgpeeitreipnvgedalrqldengiirvgawvesgdilvgkvtpkgeardvrdnslrvpngekgrvvdvrlftreqgdelppganmvvrvyvaqkrkiqvgdkmagrhgnkgiisrilpcedmpylpdgtpldivlnplgvpsrmnvgqvfecmlgwagqlldarfkvtpfdemygaeasrltvnaklseareqtgqpwvfsddepgkiqvydgrtgepfdrpvtvgraymlklvhlvddkiharstgpyslvtqqplggkaqqggqrfgemevwaleaygaayilqelltvksddmqgrnealnaivkgkaiprpgtpesfkvlmrelqslcldiavykastedyeedkevdlmadvnqrrtpsrptyes/eqrfdyvkialasperirqwgertlpngqvvgevtkpetinyrtlkpemdglfcekifgpakdwechcgkykrvrhrgivcercgvevtesrvrrhrmgfiklaapvahvwylkgipsyiailldmplrdveqivyfnsyvvlnpgnhselqykqllnedqwmeiedqiyaeesdlegievgigaealqqllqdlnlneeseklrqeiaeskgqkraklikrlrvidnfigtesrpewmvlnvipvippdlrpmvqLdggrfatsdlndlyRrvinrnnrlarlqeilapeiivrnekrmlqeavdalidngrrgRtvvgannrplkslsdiiegkqgrfrqnllgkrvdysgrsvivvgpnlkihqcglpremaielfqpfvihrliknhsinnikqakkliqkndpliwdvleevieghpvmlnrAPtlhrlgiqafepilvegraiqlhplvcpafnadfdgdqmavhvplsieaqaearmlmlasgnilspatgqpivtpsqdmvlgcyyltaenpgaqkgagryfanledairafeqgsvdlhawvwvrfdgevesegesdepesvvaaddgtvtktyrfrriretedgqrlsqyvkttpgrilfnntvqtalih/ekarwyavqvASgcekrvkatleqrvqtldaanrilqveipetpivklkkdgsrqsaeekvfpgyvlvrmildddawqivrntphvInfvgaeqkrpygrgrghvkpmplspgevgrifk/eaksapifrnrvidkkqlkkligwtfahygtaktavvaddlkalgfryatragvsisiddlkvpgskaellesaekriqetedrytrgeiteverfqkvidtwantndeltdrvvknfresdplnsvymmafsgargnisqvrqlvgmrglmanpqgeiidlpiktnfregltvteyiissygarkglvdtalrTAdsgyltrrlvdvsqdviihevdcgtsrglfveamtdgdrilipisqrllgrvtaeavldpstdevlaeagqdinedlanriekagikkvkvrspltceaarsvcqkcygwslahaqmvdmgeavgiiaaqsigepgtqltmvftgetarllrapvagtiklgkkartrpyrtrhgeeallaeanfdlvlegkgrketfailqgstifvqdgdkvaaeailaevpvsrtvekatkdvatdlageirfqdivpeektdrqgnttriaqrggllwvlagdvynllpgaeptvkngdrvevgdvlaetkltterggtvrmgedngssthreveiitasvvldtatvkaeasqgrehyvietkggqrfnllaapgtkvttghvvaelidsryrtqtggllkysgveiskkgrakakqgyevtkggtllwipeethevnkdisllnvedgqlveagtevvkdifcqttgivsvtqnndilreivikpgdvhvlddpdtaakydegrlvnageevfpgltaeqlvwaeavdgtdgpllllrpvqelvipdeppvpsqdssqesssrsirlravqrlqfqdgeriksvegvdllrtqlvleseegssqlsadiellpdskdpetlrlqlviiepvvirrdvasdtthgsthtelrvkdgqkvkpgaviactqiqckeagvvrgiqegseavrrllvererdcvtldldvtaatqlqpgslivagtqlvdgiiapesgevraiapgqlqlriarpyrvsqgavlhvedkglvqrgdnlvllvferakiiqglprieellearkpkeacilarrpgvahinysdddaidiqvieadgtqadypvgpgqpliisdgetvdagqaltdgpanphdlleiyydyfreqlgedyeaaleslrrvqallvnevqsvyqsqgidisdkhievivrqmtskvriddggdtimlpgelhelrevynsnntmaltgmapaqftpvllgitkaslntnsfisaasfqettrvlteaaiegksdwlrglkenviigrlipagtgfk >8syi_D:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=CYANOBACTERIAL RNAP-EC organism=? DNA sequence DG(T1):DC(N40) DG(T2):DC(N39) DG(T3):DC(N38) DC(T4):DG(N37) DA(T5):DT(N36) DG(T6):DC(N35) DT(T7):DA(N34) DC(T8):DG(N33) DG(T9):DC(N32) DC(T10):DG(N31) DC(T11):DG(N30) DG(T12):DC(N29) DT(T13):DA(N28) DG(T14):DG(N27) DT(T15):DT(N26) DA(T16):DA(N25) DC(T17):DC(N24) DC(T18):DC(N23) DT(T19):DT(N22) DC(T20):DC(N21) DT(T21):DT(N20) DC(T22):DC(N19) DC(T23):DC(N18) DT(T24):DA(N17) DA(T25):DT(N16) DG(T26):DC(N15) DA(T27):DT(N14) DG(T28):DC(N13) DC(T29):DG(N12) DA(T30):DT(N11) DG(T31):DC(N10) DC(T32):DG(N9) DA(T33):DT(N8) DT(T34):DA(N7) DG(T35):DC(N6) DC(T36):DG(N5) DG(T37):DC(N4) chainD (257) LEU261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (272) ARG276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (316) ARG320 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (428) ALA432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (429) PRO433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence eqrfdyvkialasperirqwgertlpngqvvgevtkpetinyrtlkpemdglfcekifgpakdwechcgkykrvrhrgivcercgvevtesrvrrhrmgfiklaapvahvwylkgipsyiailldmplrdveqivyfnsyvvlnpgnhselqykqllnedqwmeiedqiyaeesdlegievgigaealqqllqdlnlneeseklrqeiaeskgqkraklikrlrvidnfigtesrpewmvlnvipvippdlrpmvqLdggrfatsdlndlyRrvinrnnrlarlqeilapeiivrnekrmlqeavdalidngrrgRtvvgannrplkslsdiiegkqgrfrqnllgkrvdysgrsvivvgpnlkihqcglpremaielfqpfvihrliknhsinnikqakkliqkndpliwdvleevieghpvmlnrAPtlhrlgiqafepilvegraiqlhplvcpafnadfdgdqmavhvplsieaqaearmlmlasgnilspatgqpivtpsqdmvlgcyyltaenpgaqkgagryfanledairafeqgsvdlhawvwvrfdgevesegesdepesvvaaddgtvtktyrfrriretedgqrlsqyvkttpgrilfnntvqtalih >8syp_A:Histone-fold; title=GENOMIC CX3CR1 NUCLEOSOME organism=? DNA sequence DG(I6):DC(J157) DC(I7):DG(J156) DA(I8):DT(J155) DG(I9):DC(J154) DG(I10):DC(J153) DG(I11):DC(J152) DC(I12):DG(J151) DC(I13):DG(J150) DT(I14):DA(J149) DC(I15):DG(J148) DT(I16):DA(J147) DC(I17):DG(J146) DG(I18):DC(J145) DG(I19):DC(J144) DC(I20):DG(J143) DT(I21):DA(J142) DG(I22):DC(J141) DC(I23):DG(J140) DT(I24):DA(J139) DG(I25):DC(J138) DA(I26):DT(J137) DT(I27):DA(J136) DC(I28):DG(J135) DT(I29):DA(J134) DT(I30):DA(J133) DC(I31):DG(J132) DA(I32):DT(J131) DG(I33):DC(J130) DC(I34):DG(J129) DT(I35):DA(J128) DG(I36):DC(J127) DG(I37):DC(J126) DT(I38):DA(J125) DT(I39):DA(J124) DG(I40):DC(J123) DC(I41):DG(J122) DT(I42):DA(J121) DG(I43):DC(J120) DA(I44):DT(J119) DG(I45):DC(J118) DA(I46):DT(J117) DG(I47):DC(J116) DT(I48):DA(J115) DT(I49):DA(J114) DG(I50):DC(J113) DC(I51):DG(J112) DA(I52):DT(J111) DG(I53):DC(J110) DC(I54):DG(J109) DA(I55):DT(J108) DT(I56):DA(J107) DT(I57):DA(J106) DG(I58):DC(J105) DC(I59):DG(J104) DT(I60):DA(J103) DG(I61):DC(J102) DA(I62):DT(J101) DG(I63):DC(J100) DT(I64):DA(J99) DC(I65):DG(J98) DT(I66):DA(J97) DT(I67):DA(J96) DA(I68):DT(J95) DG(I69):DC(J94) DC(I70):DG(J93) DA(I71):DT(J92) DA(I72):DT(J91) DT(I73):DA(J90) DG(I74):DC(J89) DG(I75):DC(J88) DA(I76):DT(J87) DT(I77):DA(J86) DA(I78):DT(J85) DC(I79):DG(J84) DT(I80):DA(J83) DT(I81):DA(J82) DC(I82):DG(J81) DC(I83):DG(J80) DC(I84):DG(J79) DG(I85):DC(J78) DA(I86):DT(J77) DT(I87):DA(J76) DT(I88):DA(J75) DC(I89):DG(J74) DC(I90):DG(J73) DC(I91):DG(J72) DC(I92):DG(J71) DT(I93):DA(J70) DC(I94):DG(J69) DA(I95):DT(J68) DC(I96):DG(J67) DA(I97):DT(J66) DA(I98):DT(J65) DA(I99):DT(J64) DA(I100):DT(J63) DA(I101):DT(J62) DT(I102):DA(J61) DA(I103):DT(J60) DG(I104):DC(J59) DG(I105):DC(J58) DT(I106):DA(J57) DC(I107):DG(J56) DA(I108):DT(J55) DG(I109):DC(J54) DT(I110):DA(J53) DC(I111):DG(J52) DT(I112):DA(J51) DG(I113):DC(J50) DT(I114):DA(J49) DC(I115):DG(J48) DT(I116):DA(J47) DG(I117):DC(J46) DG(I118):DC(J45) DC(I119):DG(J44) DT(I120):DA(J43) DA(I121):DT(J42) DG(I122):DC(J41) DT(I123):DA(J40) DT(I124):DA(J39) DC(I125):DG(J38) DT(I126):DA(J37) DG(I127):DC(J36) DT(I128):DA(J35) DA(I129):DT(J34) DC(I130):DG(J33) DT(I131):DA(J32) DT(I132):DA(J31) DG(I133):DC(J30) DC(I134):DG(J29) DA(I135):DT(J28) DG(I136):DC(J27) DA(I137):DT(J26) DC(I138):DG(J25) DA(I139):DT(J24) DC(I140):DG(J23) DA(I141):DT(J22) DG(I142):DC(J21) DG(I143):DC(J20) DG(I144):DC(J19) DC(I145):DG(J18) DA(I146):DT(J17) DT(I147):DA(J16) DG(I148):DC(J15) DT(I149):DA(J14) DG(I150):DC(J13) DG(I151):DC(J12) DG(I152):DC(J11) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger >8syp_ABCDEFGH: title=GENOMIC CX3CR1 NUCLEOSOME organism=? DNA sequence DG(I6):DC(J157) DC(I7):DG(J156) DA(I8):DT(J155) DG(I9):DC(J154) DG(I10):DC(J153) DG(I11):DC(J152) DC(I12):DG(J151) DC(I13):DG(J150) DT(I14):DA(J149) DC(I15):DG(J148) DT(I16):DA(J147) DC(I17):DG(J146) DG(I18):DC(J145) DG(I19):DC(J144) DC(I20):DG(J143) DT(I21):DA(J142) DG(I22):DC(J141) DC(I23):DG(J140) DT(I24):DA(J139) DG(I25):DC(J138) DA(I26):DT(J137) DT(I27):DA(J136) DC(I28):DG(J135) DT(I29):DA(J134) DT(I30):DA(J133) DC(I31):DG(J132) DA(I32):DT(J131) DG(I33):DC(J130) DC(I34):DG(J129) DT(I35):DA(J128) DG(I36):DC(J127) DG(I37):DC(J126) DT(I38):DA(J125) DT(I39):DA(J124) DG(I40):DC(J123) DC(I41):DG(J122) DT(I42):DA(J121) DG(I43):DC(J120) DA(I44):DT(J119) DG(I45):DC(J118) DA(I46):DT(J117) DG(I47):DC(J116) DT(I48):DA(J115) DT(I49):DA(J114) DG(I50):DC(J113) DC(I51):DG(J112) DA(I52):DT(J111) DG(I53):DC(J110) DC(I54):DG(J109) DA(I55):DT(J108) DT(I56):DA(J107) DT(I57):DA(J106) DG(I58):DC(J105) DC(I59):DG(J104) DT(I60):DA(J103) DG(I61):DC(J102) DA(I62):DT(J101) DG(I63):DC(J100) DT(I64):DA(J99) DC(I65):DG(J98) DT(I66):DA(J97) DT(I67):DA(J96) DA(I68):DT(J95) DG(I69):DC(J94) DC(I70):DG(J93) DA(I71):DT(J92) DA(I72):DT(J91) DT(I73):DA(J90) DG(I74):DC(J89) DG(I75):DC(J88) DA(I76):DT(J87) DT(I77):DA(J86) DA(I78):DT(J85) DC(I79):DG(J84) DT(I80):DA(J83) DT(I81):DA(J82) DC(I82):DG(J81) DC(I83):DG(J80) DC(I84):DG(J79) DG(I85):DC(J78) DA(I86):DT(J77) DT(I87):DA(J76) DT(I88):DA(J75) DC(I89):DG(J74) DC(I90):DG(J73) DC(I91):DG(J72) DC(I92):DG(J71) DT(I93):DA(J70) DC(I94):DG(J69) DA(I95):DT(J68) DC(I96):DG(J67) DA(I97):DT(J66) DA(I98):DT(J65) DA(I99):DT(J64) DA(I100):DT(J63) DA(I101):DT(J62) DT(I102):DA(J61) DA(I103):DT(J60) DG(I104):DC(J59) DG(I105):DC(J58) DT(I106):DA(J57) DC(I107):DG(J56) DA(I108):DT(J55) DG(I109):DC(J54) DT(I110):DA(J53) DC(I111):DG(J52) DT(I112):DA(J51) DG(I113):DC(J50) DT(I114):DA(J49) DC(I115):DG(J48) DT(I116):DA(J47) DG(I117):DC(J46) DG(I118):DC(J45) DC(I119):DG(J44) DT(I120):DA(J43) DA(I121):DT(J42) DG(I122):DC(J41) DT(I123):DA(J40) DT(I124):DA(J39) DC(I125):DG(J38) DT(I126):DA(J37) DG(I127):DC(J36) DT(I128):DA(J35) DA(I129):DT(J34) DC(I130):DG(J33) DT(I131):DA(J32) DT(I132):DA(J31) DG(I133):DC(J30) DC(I134):DG(J29) DA(I135):DT(J28) DG(I136):DC(J27) DA(I137):DT(J26) DC(I138):DG(J25) DA(I139):DT(J24) DC(I140):DG(J23) DA(I141):DT(J22) DG(I142):DC(J21) DG(I143):DC(J20) DG(I144):DC(J19) DC(I145):DG(J18) DA(I146):DT(J17) DT(I147):DA(J16) DG(I148):DC(J15) DT(I149):DA(J14) DG(I150):DC(J13) DG(I151):DC(J12) DG(I152):DC(J11) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 66) ARG77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 46) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 25) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG chainH ( 3) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger/kvlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvIrdavtytehakrktvtamdvvyalkrqgrtlygfg/akaksrssraglqfpvgrvhrllrkgnyaeRvgagapvymaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgkvtiaqggvlpniq/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirge/vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg/akaksrssraglqfpvgrvhrllrKgnyaervgagapvymaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniq/rsRkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytss >8t1u_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CRYSTAL STRUCTURE OF THE DRM2-CTA DNA COMPLEX organism=Arabidopsis thaliana DNA sequence DA(G1):DT(E18) DT(G2):DA(E17) DT(G3):DA(E16) DA(G4):DT(E15) DT(G5):DA(E14) DT(G6):DA(E13) DA(G7):DT(E12) DA(G8):DT(E11) DT(G9):DA(E10) C49(G10):DG(E9) DT(G11):DA(E8) DA(G12):DT(E7) DA(G13):DT(E6) DA(G14):DT(E5) DT(G15):DA(E4) DT(G16):DA(E3) DT(G17):DA(E2) DA(G18):DT(E1) chainA ( 39) GLU312 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 ( 40) ASN313 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 41) VAL314 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 ( 74) ARG347 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 ( 76) ARG349 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 (122) LEU395 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 (124) CYS397 0 0 0 0 0 0 0 0 0 0 13 3 0 0 0 0 0 0 (161) LYS434 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 (162) TRP435 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 (199) THR472 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 (207) ASN480 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 (314) CYS587 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 (322) ARG595 0 0 0 0 0 0 0 0 0 40 40 0 0 0 0 0 0 0 (325) ARG598 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 prot.sequence epirlpnpmigfgvpnepglithrslpelargppffyyenvaltpkgvwetisrhlfeippefvdskyfcvaarkrgyihnlpinnrfqiqpppkytihdafplskrwwpewdkrtklnciLtCtgsaqltnrirvalepyneepeppkhvqryvidqckKWnlvwvgknkaaplepdemesilgfpknhtrgggmsrTerfkslgnsfqvdtvayhlsvlkpifphginvlslftgigggevalhrlqikmklvvsveiskvnrnilkdfweqtnqtgeliefsdiqhltndtieglmekyggfdlviggspcnnlaggnRvsRvglegdqsslffeycrilevvrarmrgs >8t3t_ABCDEFGH: title=STRUCTURE OF BRE1-NUCLEOSOME COMPLEX - STATE3 organism=? DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/niQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akTrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/trKesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/vlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akTrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8t3t_H:Histone-fold; title=STRUCTURE OF BRE1-NUCLEOSOME COMPLEX - STATE3 organism=? DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8t3w_ABCDEFGH: title=STRUCTURE OF BRE1-NUCLEOSOME COMPLEX - STATE2 organism=? DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/niQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akTrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/trKesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/vlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akTrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >8t3w_H:Histone-fold; title=STRUCTURE OF BRE1-NUCLEOSOME COMPLEX - STATE2 organism=? DNA sequence DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >8t3y_A:Histone-fold; title=STRUCTURE OF BRE1-NUCLEOSOME COMPLEX - STATE1 organism=? DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DC(J72):DG(I76) DA(J73):DT(I75) DG(J74):DC(I74) DC(J75):DG(I73) DG(J76):DC(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge >8t3y_ABCDEFGH: title=STRUCTURE OF BRE1-NUCLEOSOME COMPLEX - STATE1 organism=? DNA sequence DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DC(I72):DG(J76) DG(I73):DC(J75) DC(I74):DG(J74) DT(I75):DA(J73) DG(I76):DC(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainA ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE ( 3) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/niQgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akTrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllp/trKesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirge/vlRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akTrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >8t9f_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CATALYTIC AND NON-CATALYTIC MECHANISMS OF HISTONE H4 LYSINE 20 METHYLTRANSFERASE SUV420H1 organism=? DNA sequence DT(I2):DA(J146) DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I8):DT(J141) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DG(I72):DC(J76) DA(I73):DT(J75) DT(I74):DA(J74) DT(I75):DA(J73) DC(I76):DG(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DC(I123):DG(J25) DG(I122):DC(J27) DG(I121):DC(J26) chainB chainA ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 44) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainG ( 30) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainH ( 3) ARG34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 8) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 9) TYR41 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 51) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC chainD prot.sequence RyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/KrhrmvlrdniqgitkpairrlarrggvkrisgliyeetrgvlKvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/AvsrsqraglqfpvgrihrhlksrttshgrvgataavysaailEyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksligkkgq/KtrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiAgeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/ggvkkphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/avsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksli/ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >8t9f_F:Histone-fold; title=CATALYTIC AND NON-CATALYTIC MECHANISMS OF HISTONE H4 LYSINE 20 METHYLTRANSFERASE SUV420H1 organism=? DNA sequence DG(J25):DC(I123) DT(J28):DG(I122) DC(J26):DG(I121) DC(J27):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DG(J72):DC(I76) DA(J73):DT(I75) DA(J74):DT(I74) DT(J75):DA(I73) DC(J76):DG(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J141):DA(I8) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) DG(J145):DC(I3) DA(J146):DT(I2) chainF ( 23) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg >8t9h_ABCDEFGH:Histone-fold;P-loop_containing_nucleoside_triphosphate_hydrolases;Chromo_domain-like;Homeodomain-like;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CATALYTIC AND NON-CATALYTIC MECHANISMS OF HISTONE H4 LYSINE 20 METHYLTRANSFERASE SUV420H1 organism=? DNA sequence DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DG(J72):DC(I76) DA(J73):DT(I75) DA(J74):DT(I74) DT(J75):DA(I73) DC(J76):DG(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J117):DT(I32) DT(J118):DT(I31) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) chainA ( 1) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 29) ARG45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainD chainE ( 40) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG ( 31) ARG42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 chainH prot.sequence Ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rhrmvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/ktrkesyaiyvykvlkqvhpdtgisskamsImnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak/gtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera/rdniqgitkpairrlarrggvkrisgliyeetrgvlkvfLenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg/akaktrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk/esyaiyvykvlkqvhpdtgisskamsimnsFvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak >8t9u_F:"Winged_helix"_DNA-binding_domain; title=HUMAN PU.1 ETS-DOMAIN (165-270) IN COMPLEX WITH D(AATAAGCGIAAGTGGG) organism=Homo sapiens DNA sequence DT(C3):DA(D31) DA(C4):DT(D30) DA(C5):DT(D29) DG(C6):DC(D28) DC(C7):DG(D27) DG(C8):DC(D26) DI(C9):DC(D25) DA(C10):DT(D24) DA(C11):DT(D23) DG(C12):DC(D22) DT(C13):DA(D21) DG(C14):DC(D20) DG(C15):DC(D19) DG(C16):DC(D18) chainF ( 58) GLN226 0 0 0 0 3 3 0 0 0 0 0 0 0 0 ( 59) LYS227 0 0 0 0 0 0 0 6 0 0 0 0 0 0 ( 62) ARG230 0 0 0 0 0 15 15 9 0 0 0 0 0 0 ( 63) ALA231 0 0 0 0 0 0 0 0 1 0 0 0 0 0 ( 65) ARG233 0 0 0 0 11 8 0 0 0 0 0 0 0 0 ( 66) ASN234 0 0 0 0 0 0 0 0 1 1 0 0 0 0 prot.sequence kirlyqflldllrsgdmkdsiwwvdkdkgtfqfsskhkealahrwgiqkgnrkkmtyQKmaRAlRNygktgevkkvkkkltyqfsgevlgr >8th9_A:S13-like_H2TH_domain;N-terminal_domain_of_MutM-like_DNA_repair_proteins; title=STRUCTURE OF MAMMALIAN NEIL2 FROM MONODELPHIS DOMESTICA IN COMPLEX WITH THF-CONTAINING DNA organism=? DNA sequence DG(C1):DC(D14) DT(C2):DA(D13) DA(C3):DT(D12) DG(C4):DC(D11) DA(C5):DT(D10) DC(C6):DG(D9) DC(C7):3DR(D8) DT(C8):DA(D7) DG(C9):DC(D6) DG(C10):DC(D5) DA(C11):DT(D4) DC(C12):DG(D3) DG(C13):DC(D2) chainA ( 69) LEU141 0 0 0 0 0 38 0 5 0 0 0 0 0 ( 70) PHE142 0 0 0 0 0 34 0 18 0 0 0 0 0 ( 81) ALA153 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 82) THR154 0 0 0 0 0 0 10 0 0 0 0 0 0 (108) ASN182 0 0 0 0 5 14 0 0 0 0 0 0 0 (216) GLN290 0 0 0 0 0 0 0 0 2 0 0 0 0 (237) PHE311 0 0 0 0 2 16 0 0 0 0 0 0 0 prot.sequence pegpslrkfhqlvapfvgqlvvtvggnskkinpnmlemlrlqdsqvhgknlylnfgltsglwlcfhfgLFgsvraselsrATkankrwkdpiprlvlhfakgflafyNcriywclgptvkptsdilseefdrrqalealkqaspvsytlldqryfaglgniiknevlylarihplslgscltplnleslldhvvsfsvgwlqkklegkplhhliyQkeqcpaghqvmkdsfgppgsFqrltwwcphcqpkaee >8thu_A:Histone-fold; title=CATALYTIC AND NON-CATALYTIC MECHANISMS OF HISTONE H4 LYSINE 20 METHYLTRANSFERASE SUV420H1 organism=? DNA sequence DA(J1):DT(I147) DT(J2):DA(I146) DC(J3):DG(I145) DG(J4):DC(I144) DG(J5):DC(I143) DA(J6):DT(I142) DT(J7):DA(I141) DG(J8):DC(I140) DT(J9):DA(I139) DA(J10):DT(I138) DT(J11):DA(I137) DA(J12):DT(I136) DT(J13):DA(I135) DA(J14):DT(I134) DT(J15):DA(I133) DC(J16):DG(I132) DT(J17):DA(I131) DG(J18):DC(I130) DA(J19):DT(I129) DC(J20):DG(I128) DA(J21):DT(I127) DC(J22):DG(I126) DG(J23):DC(I125) DT(J24):DA(I124) DG(J25):DC(I123) DC(J26):DG(I122) DC(J27):DG(I121) DT(J28):DA(I120) DG(J29):DC(I119) DG(J30):DC(I118) DA(J31):DT(I117) DG(J32):DC(I116) DA(J33):DT(I115) DC(J34):DG(I114) DT(J35):DA(I113) DA(J36):DT(I112) DG(J37):DC(I111) DG(J38):DC(I110) DG(J39):DC(I109) DA(J40):DT(I108) DG(J41):DC(I107) DT(J42):DA(I106) DA(J43):DT(I105) DA(J44):DT(I104) DT(J45):DA(I103) DC(J46):DG(I102) DC(J47):DG(I101) DC(J48):DG(I100) DC(J49):DG(I99) DT(J50):DA(I98) DT(J51):DA(I97) DG(J52):DC(I96) DG(J53):DC(I95) DC(J54):DG(I94) DG(J55):DC(I93) DG(J56):DC(I92) DT(J57):DA(I91) DT(J58):DA(I90) DA(J59):DT(I89) DA(J60):DT(I88) DA(J61):DT(I87) DA(J62):DT(I86) DC(J63):DG(I85) DG(J64):DC(I84) DC(J65):DG(I83) DG(J66):DC(I82) DG(J67):DC(I81) DG(J68):DC(I80) DG(J69):DC(I79) DG(J70):DC(I78) DA(J71):DT(I77) DG(J72):DC(I76) DA(J73):DT(I75) DA(J74):DT(I74) DT(J75):DA(I73) DC(J76):DG(I72) DC(J77):DG(I71) DG(J78):DC(I70) DT(J79):DA(I69) DA(J80):DT(I68) DC(J81):DG(I67) DG(J82):DC(I66) DT(J83):DA(I65) DG(J84):DC(I64) DC(J85):DG(I63) DG(J86):DC(I62) DT(J87):DA(I61) DT(J88):DA(I60) DT(J89):DA(I59) DA(J90):DT(I58) DA(J91):DT(I57) DG(J92):DC(I56) DC(J93):DG(I55) DG(J94):DC(I54) DG(J95):DC(I53) DT(J96):DA(I52) DG(J97):DC(I51) DC(J98):DG(I50) DT(J99):DA(I49) DA(J100):DT(I48) DG(J101):DC(I47) DA(J102):DT(I46) DG(J103):DC(I45) DC(J104):DG(I44) DT(J105):DA(I43) DG(J106):DC(I42) DT(J107):DA(I41) DC(J108):DG(I40) DT(J109):DA(I39) DA(J110):DT(I38) DC(J111):DG(I37) DG(J112):DC(I36) DA(J113):DT(I35) DC(J114):DG(I34) DC(J115):DG(I33) DA(J116):DT(I32) DA(J117):DT(I31) DT(J118):DA(I30) DT(J119):DA(I29) DG(J120):DC(I28) DA(J121):DT(I27) DG(J122):DC(I26) DC(J123):DG(I25) DG(J124):DC(I24) DG(J125):DC(I23) DC(J126):DG(I22) DC(J127):DG(I21) DT(J128):DA(I20) DC(J129):DG(I19) DG(J130):DC(I18) DG(J131):DC(I17) DC(J132):DG(I16) DA(J133):DT(I15) DC(J134):DG(I14) DC(J135):DG(I13) DG(J136):DC(I12) DG(J137):DC(I11) DG(J138):DC(I10) DA(J139):DT(I9) DT(J140):DA(I8) DT(J141):DA(I7) DC(J142):DG(I6) DT(J143):DA(I5) DC(J144):DG(I4) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger >8thu_ABCDEFGH:Histone-fold;lambda_repressor-like_DNA-binding_domains;p53-like_transcription_factors; title=CATALYTIC AND NON-CATALYTIC MECHANISMS OF HISTONE H4 LYSINE 20 METHYLTRANSFERASE SUV420H1 organism=? DNA sequence DC(I3):DG(J145) DG(I4):DC(J144) DA(I5):DT(J143) DG(I6):DC(J142) DA(I7):DT(J141) DA(I8):DT(J140) DT(I9):DA(J139) DC(I10):DG(J138) DC(I11):DG(J137) DC(I12):DG(J136) DG(I13):DC(J135) DG(I14):DC(J134) DT(I15):DA(J133) DG(I16):DC(J132) DC(I17):DG(J131) DC(I18):DG(J130) DG(I19):DC(J129) DA(I20):DT(J128) DG(I21):DC(J127) DG(I22):DC(J126) DC(I23):DG(J125) DC(I24):DG(J124) DG(I25):DC(J123) DC(I26):DG(J122) DT(I27):DA(J121) DC(I28):DG(J120) DA(I29):DT(J119) DA(I30):DT(J118) DT(I31):DA(J117) DT(I32):DA(J116) DG(I33):DC(J115) DG(I34):DC(J114) DT(I35):DA(J113) DC(I36):DG(J112) DG(I37):DC(J111) DT(I38):DA(J110) DA(I39):DT(J109) DG(I40):DC(J108) DA(I41):DT(J107) DC(I42):DG(J106) DA(I43):DT(J105) DG(I44):DC(J104) DC(I45):DG(J103) DT(I46):DA(J102) DC(I47):DG(J101) DT(I48):DA(J100) DA(I49):DT(J99) DG(I50):DC(J98) DC(I51):DG(J97) DA(I52):DT(J96) DC(I53):DG(J95) DC(I54):DG(J94) DG(I55):DC(J93) DC(I56):DG(J92) DT(I57):DA(J91) DT(I58):DA(J90) DA(I59):DT(J89) DA(I60):DT(J88) DA(I61):DT(J87) DC(I62):DG(J86) DG(I63):DC(J85) DC(I64):DG(J84) DA(I65):DT(J83) DC(I66):DG(J82) DG(I67):DC(J81) DT(I68):DA(J80) DA(I69):DT(J79) DC(I70):DG(J78) DG(I71):DC(J77) DG(I72):DC(J76) DA(I73):DT(J75) DT(I74):DA(J74) DT(I75):DA(J73) DC(I76):DG(J72) DT(I77):DA(J71) DC(I78):DG(J70) DC(I79):DG(J69) DC(I80):DG(J68) DC(I81):DG(J67) DC(I82):DG(J66) DG(I83):DC(J65) DC(I84):DG(J64) DG(I85):DC(J63) DT(I86):DA(J62) DT(I87):DA(J61) DT(I88):DA(J60) DT(I89):DA(J59) DA(I90):DT(J58) DA(I91):DT(J57) DC(I92):DG(J56) DC(I93):DG(J55) DG(I94):DC(J54) DC(I95):DG(J53) DC(I96):DG(J52) DA(I97):DT(J51) DA(I98):DT(J50) DG(I99):DC(J49) DG(I100):DC(J48) DG(I101):DC(J47) DG(I102):DC(J46) DA(I103):DT(J45) DT(I104):DA(J44) DT(I105):DA(J43) DA(I106):DT(J42) DC(I107):DG(J41) DT(I108):DA(J40) DC(I109):DG(J39) DC(I110):DG(J38) DC(I111):DG(J37) DT(I112):DA(J36) DA(I113):DT(J35) DG(I114):DC(J34) DT(I115):DA(J33) DC(I116):DG(J32) DT(I117):DA(J31) DC(I118):DG(J30) DC(I119):DG(J29) DA(I120):DT(J28) DG(I121):DC(J27) DG(I122):DC(J26) DC(I123):DG(J25) DA(I124):DT(J24) DC(I125):DG(J23) DG(I126):DC(J22) DT(I127):DA(J21) DG(I128):DC(J20) DT(I129):DA(J19) DC(I130):DG(J18) DA(I131):DT(J17) DG(I132):DC(J16) DA(I133):DT(J15) DT(I134):DA(J14) DA(I135):DT(J13) DT(I136):DA(J12) DA(I137):DT(J11) DT(I138):DA(J10) DA(I139):DT(J9) DC(I140):DG(J8) DA(I141):DT(J7) DT(I142):DA(J6) DC(I143):DG(J5) DC(I144):DG(J4) DG(I145):DC(J3) DA(I146):DT(J2) DT(I147):DA(J1) chainG ( 30) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 30) ARG35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainD ( 2) ARG33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainH prot.sequence kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/hrkVlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvfleNvirdavtytehakrktvtamdvvyalkrqgrtlygfg/avsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksli/tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa/kphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger/hrkVlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvfleNvirdavtytehakrktvtamdvvyalkrqgrtlygfg/avsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksligkkg/trkesyaiyvykvlkqvhpdtgisskamsImnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa >8tip_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE WITH BLUNT ENDS AND 5' TERMINAL PHOSPHATES. organism=Escherichia coli K-12 DNA sequence DC(B4):DG(A32) DC(B5):DG(A31) DG(B6):DC(A30) DT(B7):DA(A29) DC(B8):DG(A28) DT(B9):DA(A27) DG(B10):DC(A26) DA(B11):DT(A25) DG(B12):DC(A24) DG(B13):DC(A23) DG(B14):DC(A22) DC(B15):DG(A21) DA(B16):DT(A20) DA(B17):DT(A19) DT(B18):DA(A18) DT(B19):DA(A17) DT(B20):DA(A16) DG(B21):DC(A15) DT(B22):DA(A14) DC(B23):DG(A13) DA(B24):DT(A12) DC(B25):DG(A11) DA(B26):DT(A10) DG(B27):DC(A9) DG(B28):DC(A8) DT(B29):DA(A7) DC(B30):DG(A6) DC(B31):DG(A5) DG(B32):DC(A4) DG(B33):DC(A3) DG(B34):DC(A2) chainC ( 56) SER75 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA76 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLU77 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) SER79 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) LYS80 0 0 0 0 0 0 0 0 0 4 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG83 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG124 0 0 0 0 1 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (166) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (168) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 8 3 0 0 0 0 0 0 0 0 (170) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 (171) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 1 0 0 0 0 0 0 0 0 0 0 (174) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 13 12 0 0 0 0 0 0 0 0 0 0 (175) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 17 5 0 0 0 0 0 0 0 0 0 0 0 0 (201) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 prot.sequence nsprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffiqnrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdits >8tiq_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE WITH BLUNT ENDS AND 3' TERMINAL PHOSPHATES. organism=Escherichia coli K-12 DNA sequence DC(B4):DG(A32) DC(B5):DG(A31) DG(B6):DC(A30) DT(B7):DA(A29) DC(B8):DG(A28) DT(B9):DA(A27) DG(B10):DC(A26) DA(B11):DT(A25) DG(B12):DC(A24) DG(B13):DC(A23) DG(B14):DC(A22) DC(B15):DG(A21) DA(B16):DT(A20) DA(B17):DT(A19) DT(B18):DA(A18) DT(B19):DA(A17) DT(B20):DA(A16) DG(B21):DC(A15) DT(B22):DA(A14) DC(B23):DG(A13) DA(B24):DT(A12) DC(B25):DG(A11) DA(B26):DT(A10) DG(B27):DC(A9) DG(B28):DC(A8) DT(B29):DA(A7) DC(B30):DG(A6) DC(B31):DG(A5) DG(B32):DC(A4) DG(B33):DC(A3) DG(B34):DC(A2) chainC ( 56) SER75 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA76 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLU77 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) SER79 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) LYS80 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG83 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG124 0 0 0 0 2 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 (165) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (167) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 6 3 0 0 0 0 0 0 0 0 (169) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 (170) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8 1 0 0 0 0 0 0 0 0 0 0 (173) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 12 0 0 0 0 0 0 0 0 0 0 (174) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 18 5 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 1 0 0 0 0 prot.sequence nsprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >8tir_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE WITH 1 STICKY BASES AND 5' TERMINAL PHOSPHATES. organism=Escherichia coli K-12 DNA sequence DC(A3):DG(B33) DC(A4):DG(B32) DG(A5):DC(B31) DG(A6):DC(B30) DA(A7):DT(B29) DC(A8):DG(B28) DC(A9):DG(B27) DT(A10):DA(B26) DG(A11):DC(B25) DT(A12):DA(B24) DG(A13):DC(B23) DA(A14):DT(B22) DC(A15):DG(B21) DA(A16):DT(B20) DA(A17):DT(B19) DA(A18):DT(B18) DT(A19):DA(B17) DT(A20):DA(B16) DG(A21):DC(B15) DC(A22):DG(B14) DC(A23):DG(B13) DC(A24):DG(B12) DT(A25):DA(B11) DC(A26):DG(B10) DA(A27):DT(B9) DG(A28):DC(B8) DA(A29):DT(B7) DC(A30):DG(B6) DG(A31):DC(B5) DG(A32):DC(B4) chainC ( 56) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 57) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 58) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 ( 60) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 61) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 ( 64) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 94) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 2 0 0 0 0 (164) SER197 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) TYR198 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ARG200 0 0 0 0 0 0 0 3 9 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) PRO202 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ASP203 0 0 0 0 0 0 0 0 0 1 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG206 0 0 0 0 0 0 0 0 0 15 13 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (174) ARG207 0 0 0 0 0 0 0 0 0 0 0 5 17 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (200) ARG233 0 0 0 2 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffinrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >8tis_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE WITH 1 STICKY BASES AND 3' TERMINAL PHOSPHATES. organism=Escherichia coli K-12 DNA sequence DC(A3):DG(B33) DC(A4):DG(B32) DG(A5):DC(B31) DG(A6):DC(B30) DA(A7):DT(B29) DC(A8):DG(B28) DC(A9):DG(B27) DT(A10):DA(B26) DG(A11):DC(B25) DT(A12):DA(B24) DG(A13):DC(B23) DA(A14):DT(B22) DC(A15):DG(B21) DA(A16):DT(B20) DA(A17):DT(B19) DA(A18):DT(B18) DT(A19):DA(B17) DT(A20):DA(B16) DG(A21):DC(B15) DC(A22):DG(B14) DC(A23):DG(B13) DC(A24):DG(B12) DT(A25):DA(B11) DC(A26):DG(B10) DA(A27):DT(B9) DG(A28):DC(B8) DA(A29):DT(B7) DC(A30):DG(B6) DG(A31):DC(B5) DG(A32):DC(B4) chainC ( 56) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 ( 57) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 58) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 ( 60) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 61) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 ( 64) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 94) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 10 0 0 0 0 (163) SER197 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) TYR198 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ARG200 0 0 0 0 0 0 0 4 8 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) PRO202 0 0 0 0 0 0 0 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ASP203 0 0 0 0 0 0 0 0 0 1 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG206 0 0 0 0 0 0 0 0 0 10 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (173) ARG207 0 0 0 0 0 0 0 0 0 0 0 5 18 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (199) ARG233 0 0 0 2 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence nsprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffirftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >8tit_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE WITH 2 STICKY BASE OVERHANGS AND NO TERMINAL PHOSPHATES. organism=Escherichia coli K-12 DNA sequence DC(B4):DG(A32) DC(B5):DG(A31) DG(B6):DC(A30) DT(B7):DA(A29) DC(B8):DG(A28) DT(B9):DA(A27) DG(B10):DC(A26) DA(B11):DT(A25) DG(B12):DC(A24) DG(B13):DC(A23) DG(B14):DC(A22) DC(B15):DG(A21) DA(B16):DT(A20) DA(B17):DT(A19) DT(B18):DA(A18) DT(B19):DA(A17) DT(B20):DA(A16) DG(B21):DC(A15) DT(B22):DA(A14) DC(B23):DG(A13) DA(B24):DT(A12) DC(B25):DG(A11) DA(B26):DT(A10) DG(B27):DC(A9) DG(B28):DC(A8) DT(B29):DA(A7) DC(B30):DG(A6) DC(B31):DG(A5) DG(B32):DC(A4) chainC ( 54) SER75 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ALA76 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLU77 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) SER79 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS80 0 0 0 0 0 0 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG83 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG124 0 0 0 0 5 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (163) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (165) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 9 3 0 0 0 0 0 0 (167) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 (168) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 (171) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 14 0 0 0 0 0 0 0 0 (172) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 17 5 0 0 0 0 0 0 0 0 0 0 (198) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 prot.sequence sprivqsndlteaayslsrdqkrmlylfvdqirksdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >8tiu_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE WITH 2 STICKY BASE OVERHANGS AND 3' TERMINAL PHOSPHATES. organism=Escherichia coli K-12 DNA sequence DC(B4):DG(A32) DC(B5):DG(A31) DG(B6):DC(A30) DT(B7):DA(A29) DC(B8):DG(A28) DT(B9):DA(A27) DG(B10):DC(A26) DA(B11):DT(A25) DG(B12):DC(A24) DG(B13):DC(A23) DG(B14):DC(A22) DC(B15):DG(A21) DA(B16):DT(A20) DA(B17):DT(A19) DT(B18):DA(A18) DT(B19):DA(A17) DT(B20):DA(A16) DG(B21):DC(A15) DT(B22):DA(A14) DC(B23):DG(A13) DA(B24):DT(A12) DC(B25):DG(A11) DA(B26):DT(A10) DG(B27):DC(A9) DG(B28):DC(A8) DT(B29):DA(A7) DC(B30):DG(A6) DC(B31):DG(A5) DG(B32):DC(A4) chainC ( 56) SER75 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 57) ALA76 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) GLU77 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 60) SER79 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 61) LYS80 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) ARG83 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 94) ARG124 0 0 0 0 3 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (164) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (165) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (167) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 8 3 0 0 0 0 0 0 (169) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 (170) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 8 1 0 0 0 0 0 0 0 0 (173) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 12 10 0 0 0 0 0 0 0 0 (174) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 15 3 0 0 0 0 0 0 0 0 0 0 (200) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 3 0 0 prot.sequence nsprivqsndlteaayslsrdqkrmlylfvdqirkshdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdit >8tiv_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE WITH BLUNT ENDS AND 5' TERMINAL PHOSPHATES AND CROSSLINKED WITH EDC. organism=Escherichia coli K-12 DNA sequence DC(A2):DG(B34) DC(A3):DG(B33) DC(A4):DG(B32) DG(A5):DC(B31) DG(A6):DC(B30) DA(A7):DT(B29) DC(A8):DG(B28) DC(A9):DG(B27) DT(A10):DA(B26) DG(A11):DC(B25) DT(A12):DA(B24) DG(A13):DC(B23) DA(A14):DT(B22) DC(A15):DG(B21) DA(A16):DT(B20) DA(A17):DT(B19) DA(A18):DT(B18) DT(A19):DA(B17) DT(A20):DA(B16) DG(A21):DC(B15) DC(A22):DG(B14) DC(A23):DG(B13) DC(A24):DG(B12) DT(A25):DA(B11) DC(A26):DG(B10) DA(A27):DT(B9) DG(A28):DC(B8) DA(A29):DT(B7) DG(A31):DC(B5) DG(A32):DC(B4) chainC ( 54) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 ( 56) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 ( 58) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 ( 59) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 ( 62) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 91) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 5 0 0 0 (160) SER197 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) ARG200 0 0 0 0 0 0 0 0 3 8 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) PRO202 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (166) ASP203 0 0 0 0 0 0 0 0 0 0 2 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (169) ARG206 0 0 0 0 0 0 0 0 0 0 14 15 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (170) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 2 16 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (196) ARG233 0 0 0 0 0 6 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sprivqsndlteaayslsrdqkrmlylfvdqirksdgiceihvakyaeifgltSaEaSKdiRqalksfagkevvfyesfpwfikpahspsRglysvhinpylipffirftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >8tiw_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE WITH BLUNT ENDS AND 3' TERMINAL PHOSPHATES AND CROSSLINKED WITH EDC. organism=Escherichia coli K-12 DNA sequence DC(B4):DG(A32) DC(B5):DG(A31) DG(B6):DC(A30) DT(B7):DA(A29) DC(B8):DG(A28) DT(B9):DA(A27) DG(B10):DC(A26) DA(B11):DT(A25) DG(B12):DC(A24) DG(B13):DC(A23) DG(B14):DC(A22) DC(B15):DG(A21) DA(B16):DT(A20) DA(B17):DT(A19) DT(B18):DA(A18) DT(B19):DA(A17) DT(B20):DA(A16) DG(B21):DC(A15) DT(B22):DA(A14) DC(B23):DG(A13) DA(B24):DT(A12) DC(B25):DG(A11) DA(B26):DT(A10) DG(B27):DC(A9) DG(B28):DC(A8) DT(B29):DA(A7) DC(B30):DG(A6) DC(B31):DG(A5) DG(B32):DC(A4) DG(B33):DC(A3) DG(B34):DC(A2) chainC ( 54) SER75 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ALA76 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLU77 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) SER79 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS80 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG83 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG124 0 0 0 0 1 7 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (162) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 (164) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 9 3 0 0 0 0 0 0 0 0 (166) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 (167) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 1 0 0 0 0 0 0 0 0 0 0 (170) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 10 15 0 0 0 0 0 0 0 0 0 0 (171) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 14 3 0 0 0 0 0 0 0 0 0 0 0 0 (197) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 prot.sequence sprivqsndlteaayslsrdqkrmlylfvdqirksdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffirftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >8tix_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE WITH 1 STICKY BASES AND 5' TERMINAL PHOSPHATES AND CROSSLINKED WITH EDC. organism=Escherichia coli K-12 DNA sequence DC(A3):DG(B33) DC(A4):DG(B32) DG(A5):DC(B31) DG(A6):DC(B30) DA(A7):DT(B29) DC(A8):DG(B28) DC(A9):DG(B27) DT(A10):DA(B26) DG(A11):DC(B25) DT(A12):DA(B24) DG(A13):DC(B23) DA(A14):DT(B22) DC(A15):DG(B21) DA(A16):DT(B20) DA(A17):DT(B19) DA(A18):DT(B18) DT(A19):DA(B17) DT(A20):DA(B16) DG(A21):DC(B15) DC(A22):DG(B14) DC(A23):DG(B13) DC(A24):DG(B12) DT(A25):DA(B11) DC(A26):DG(B10) DA(A27):DT(B9) DG(A28):DC(B8) DA(A29):DT(B7) DC(A30):DG(B6) DG(A31):DC(B5) DG(A32):DC(B4) chainC ( 54) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 ( 55) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 56) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 ( 58) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 ( 59) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 0 0 0 0 0 0 0 0 ( 62) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 ( 92) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 2 0 0 0 0 (162) SER197 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) TYR198 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ARG200 0 0 0 0 0 0 0 4 9 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) PRO202 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ASP203 0 0 0 0 0 0 0 0 0 1 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG206 0 0 0 0 0 0 0 0 0 12 9 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG207 0 0 0 0 0 0 0 0 0 0 0 5 18 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG233 0 0 0 3 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sprivqsndlteaayslsrdqkrmlylfvdqirksdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >8tiy_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE WITH 1 STICKY BASES AND 3' TERMINAL PHOSPHATES AND CROSSLINKED WITH EDC. organism=Escherichia coli K-12 DNA sequence DC(B4):DG(A32) DC(B5):DG(A31) DG(B6):DC(A30) DT(B7):DA(A29) DC(B8):DG(A28) DT(B9):DA(A27) DG(B10):DC(A26) DA(B11):DT(A25) DG(B12):DC(A24) DG(B13):DC(A23) DG(B14):DC(A22) DC(B15):DG(A21) DA(B16):DT(A20) DA(B17):DT(A19) DT(B18):DA(A18) DT(B19):DA(A17) DT(B20):DA(A16) DG(B21):DC(A15) DT(B22):DA(A14) DC(B23):DG(A13) DA(B24):DT(A12) DC(B25):DG(A11) DA(B26):DT(A10) DG(B27):DC(A9) DG(B28):DC(A8) DT(B29):DA(A7) DC(B30):DG(A6) DC(B31):DG(A5) DG(B32):DC(A4) DG(B33):DC(A3) chainC ( 54) SER75 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ALA76 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLU77 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) SER79 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS80 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG83 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG124 0 0 0 0 1 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 (163) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 (165) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 8 3 0 0 0 0 0 0 0 (167) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 0 (168) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 0 0 0 0 0 0 0 0 0 0 (171) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 12 7 0 0 0 0 0 0 0 0 0 (172) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 17 5 0 0 0 0 0 0 0 0 0 0 0 (198) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 9 3 0 0 0 prot.sequence sprivqsndlteaayslsrdqkrmlylfvdqirksdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >8tiz_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE WITH 2 STICKY BASE OVERHANGS AND NO TERMINAL PHOSPHATES AND CROSSLINKED WITH EDC. organism=Escherichia coli K-12 DNA sequence DC(B4):DG(A32) DC(B5):DG(A31) DG(B6):DC(A30) DT(B7):DA(A29) DC(B8):DG(A28) DT(B9):DA(A27) DG(B10):DC(A26) DA(B11):DT(A25) DG(B12):DC(A24) DG(B13):DC(A23) DG(B14):DC(A22) DC(B15):DG(A21) DA(B16):DT(A20) DA(B17):DT(A19) DT(B18):DA(A18) DT(B19):DA(A17) DT(B20):DA(A16) DG(B21):DC(A15) DT(B22):DA(A14) DC(B23):DG(A13) DA(B24):DT(A12) DC(B25):DG(A11) DA(B26):DT(A10) DG(B27):DC(A9) DG(B28):DC(A8) DT(B29):DA(A7) DC(B30):DG(A6) DC(B31):DG(A5) DG(B32):DC(A4) chainC ( 54) SER75 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ALA76 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLU77 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) SER79 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS80 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG83 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG124 0 0 0 0 2 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 (163) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (165) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 8 3 0 0 0 0 0 0 (167) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 (168) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 1 0 0 0 0 0 0 0 0 (171) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 11 13 0 0 0 0 0 0 0 0 (172) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 18 5 0 0 0 0 0 0 0 0 0 0 (198) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 1 0 0 prot.sequence sprivqsndlteaayslsrdqkrmlylfvdqirksdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >8tj0_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE WITH 2 STICKY BASE OVERHANGS AND 5' TERMINAL PHOSPHATES AND CROSSLINKED WITH EDC. organism=Escherichia coli K-12 DNA sequence DC(B4):DG(A32) DC(B5):DG(A31) DG(B6):DC(A30) DT(B7):DA(A29) DC(B8):DG(A28) DT(B9):DA(A27) DG(B10):DC(A26) DA(B11):DT(A25) DG(B12):DC(A24) DG(B13):DC(A23) DG(B14):DC(A22) DC(B15):DG(A21) DA(B16):DT(A20) DA(B17):DT(A19) DT(B18):DA(A18) DT(B19):DA(A17) DT(B20):DA(A16) DG(B21):DC(A15) DT(B22):DA(A14) DC(B23):DG(A13) DA(B24):DT(A12) DC(B25):DG(A11) DA(B26):DT(A10) DG(B27):DC(A9) DG(B28):DC(A8) DT(B29):DA(A7) DC(B30):DG(A6) DC(B31):DG(A5) DG(B32):DC(A4) chainC ( 54) SER75 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 55) ALA76 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) GLU77 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 58) SER79 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 59) LYS80 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) ARG83 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 92) ARG124 0 0 0 0 3 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (162) SER197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 (163) TYR198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 (165) ARG200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 9 9 2 0 0 0 0 0 0 (167) PRO202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 0 0 0 0 0 (168) ASP203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 0 0 0 0 0 0 (171) ARG206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 14 8 0 0 0 0 0 0 0 0 (172) ARG207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 18 4 0 0 0 0 0 0 0 0 0 0 (198) ARG233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 1 0 0 prot.sequence sprivqsndlteaayslsrdqkrmlylfvdqirksdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >8tj1_C:"Winged_helix"_DNA-binding_domain; title=ISORETICULAR, INTERPENETRATING CO-CRYSTAL OF REPLICATION INITIATOR PROTEIN REPE54 AND SYMMETRICAL EXPANDED DUPLEX (31MER) CONTAINING THE COGNATE REPE54 SEQUENCE AND AN ADDITIONAL G-C RICH SEQUENCE WITH 2 STICKY BASE OVERHANGS AND 3' TERMINAL PHOSPHATES AND CROSSLINKED WITH EDC. organism=Escherichia coli K-12 DNA sequence DC(A4):DG(B32) DG(A5):DC(B31) DG(A6):DC(B30) DA(A7):DT(B29) DC(A8):DG(B28) DC(A9):DG(B27) DT(A10):DA(B26) DG(A11):DC(B25) DT(A12):DA(B24) DG(A13):DC(B23) DA(A14):DT(B22) DC(A15):DG(B21) DA(A16):DT(B20) DA(A17):DT(B19) DA(A18):DT(B18) DT(A19):DA(B17) DT(A20):DA(B16) DG(A21):DC(B15) DC(A22):DG(B14) DC(A23):DG(B13) DC(A24):DG(B12) DT(A25):DA(B11) DC(A26):DG(B10) DA(A27):DT(B9) DG(A28):DC(B8) DA(A29):DT(B7) DC(A30):DG(B6) DG(A31):DC(B5) DG(A32):DC(B4) chainC ( 54) SER75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 ( 55) ALA76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 ( 56) GLU77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 ( 58) SER79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 ( 59) LYS80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 ( 62) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 ( 92) ARG124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 7 4 0 0 0 0 (162) SER197 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (163) TYR198 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (165) ARG200 0 0 0 0 0 0 3 11 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) PRO202 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (168) ASP203 0 0 0 0 0 0 0 0 1 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (171) ARG206 0 0 0 0 0 0 0 0 14 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (172) ARG207 0 0 0 0 0 0 0 0 0 0 5 18 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (198) ARG233 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sprivqsndlteaayslsrdqkrmlylfvdqirksdgiceihvakyaeifgltSAEaSKdiRqalksfagkevvfyyesfpwfikpahspsRglysvhinpylipffigrftqfrlsetkeitnpyamrlyeslcqyrkpdgsgivslkidwiieryqlpqSYqRmPDfrRRflqvcvneinsrtpmrlsyiekkkgRqtthivfsfrdi >8tkl_A:p53-like_transcription_factors;E_set_domains; title=MURINE NF-KAPPAB P50 REL HOMOLOGY REGION HOMODIMER IN COMPLEX WITH A TEST 16-MER KAPPAB-LIKE DNA organism=Mus musculus DNA sequence DG(D2):DC(C17) DA(D3):DT(C16) DG(D4):DC(C15) DG(D5):DC(C14) DG(D6):DC(C13) DG(D7):DC(C12) DA(D8):DT(C11) DA(D9):DT(C10) DT(D10):DA(C9) DT(D11):DA(C8) DC(D12):DG(C7) DC(D13):DG(C6) DC(D14):DG(C5) DC(D15):DG(C4) DT(D16):DA(C3) DG(D17):DC(C2) chainA ( 16) ARG54 0 0 0 0 0 0 0 0 0 0 2 10 9 0 0 0 ( 18) ARG56 0 0 0 0 0 0 0 0 0 0 0 1 14 2 0 0 ( 19) TYR57 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 ( 21) CYS59 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 22) GLU60 0 0 0 0 0 0 0 0 0 0 8 5 1 0 0 0 ( 26) HIS64 0 0 0 0 0 0 0 0 0 0 0 0 4 14 0 0 (203) LYS241 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (234) LYS272 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (267) ARG305 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 prot.sequence gpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdKvqkddiqirfyeeeenggvwegfgdfsptdvhRqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >8tkl_AB: title=MURINE NF-KAPPAB P50 REL HOMOLOGY REGION HOMODIMER IN COMPLEX WITH A TEST 16-MER KAPPAB-LIKE DNA organism=Mus musculus DNA sequence DG(D2):DC(C17) DA(D3):DT(C16) DG(D4):DC(C15) DG(D5):DC(C14) DG(D6):DC(C13) DG(D7):DC(C12) DA(D8):DT(C11) DA(D9):DT(C10) DT(D10):DA(C9) DT(D11):DA(C8) DC(D12):DG(C7) DC(D13):DG(C6) DC(D14):DG(C5) DC(D15):DG(C4) DT(D16):DA(C3) DG(D17):DC(C2) chainA ( 16) ARG54 0 0 0 0 0 0 0 0 0 0 2 10 9 0 0 0 ( 18) ARG56 0 0 0 0 0 0 0 0 0 0 0 1 14 2 0 0 ( 19) TYR57 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 ( 21) CYS59 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 ( 22) GLU60 0 0 0 0 0 0 0 0 0 0 8 5 1 0 0 0 ( 26) HIS64 0 0 0 0 0 0 0 0 0 0 0 0 4 14 0 0 (203) LYS241 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (234) LYS272 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 (267) ARG305 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 chainB ( 16) ARG54 0 0 0 0 12 10 2 0 0 0 0 0 0 0 0 0 ( 18) ARG56 0 0 0 7 9 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR57 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 ( 21) CYS59 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 ( 22) GLU60 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 ( 26) HIS64 0 0 0 13 3 0 0 0 0 0 0 0 0 0 0 0 (203) LYS241 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 prot.sequence gpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdKvqkddiqirfyeeeenggvwegfgdfsptdvhRqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype/gpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >8tkm_AB: title=MURINE NF-KAPPAB P50 REL HOMOLOGY REGION HOMODIMER IN COMPLEX WITH 17- MER KAPPAB DNA FROM HUMAN INTERLEUKIN-6 (IL-6) PROMOTER organism=Mus musculus DNA sequence DC(D1):DG(C17) DA(D2):DT(C16) DT(D3):DA(C15) DG(D4):DC(C14) DG(D5):DC(C13) DG(D6):DC(C12) DA(D7):DT(C11) DA(D8):DT(C10) DA(D9):DT(C9) DA(D10):DT(C8) DT(D11):DA(C7) DC(D12):DG(C6) DC(D13):DG(C5) DC(D14):DG(C4) DA(D15):DT(C3) DC(D16):DG(C2) DA(D17):DT(C1) chainA ( 16) ARG54 0 0 0 0 0 0 0 0 0 0 2 10 9 0 0 0 0 ( 18) ARG56 0 0 0 0 0 0 0 0 0 0 0 1 11 2 0 0 0 ( 19) TYR57 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 ( 21) CYS59 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 22) GLU60 0 0 0 0 0 0 0 0 0 0 10 7 0 0 0 0 0 ( 25) SER63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 ( 26) HIS64 0 0 0 0 0 0 0 0 0 0 0 0 4 11 2 0 0 (203) LYS241 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 0 0 chainB ( 16) ARG54 0 0 0 0 10 8 2 0 0 0 0 0 0 0 0 0 0 ( 18) ARG56 0 0 0 2 10 0 0 0 0 0 0 0 0 0 0 0 0 ( 19) TYR57 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 ( 21) CYS59 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 ( 22) GLU60 0 0 0 0 0 6 11 0 0 0 0 0 0 0 0 0 0 ( 26) HIS64 0 0 3 11 3 0 0 0 0 0 0 0 0 0 0 0 0 (203) LYS241 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 prot.sequence gpylqileqpkqrgfRfRYvCEgpSHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype/gpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >8tkm_B:p53-like_transcription_factors;E_set_domains; title=MURINE NF-KAPPAB P50 REL HOMOLOGY REGION HOMODIMER IN COMPLEX WITH 17- MER KAPPAB DNA FROM HUMAN INTERLEUKIN-6 (IL-6) PROMOTER organism=Mus musculus DNA sequence DT(C1):DA(D17) DG(C2):DC(D16) DT(C3):DA(D15) DG(C4):DC(D14) DG(C5):DC(D13) DG(C6):DC(D12) DA(C7):DT(D11) DT(C8):DA(D10) DT(C9):DA(D9) DT(C10):DA(D8) DT(C11):DA(D7) DC(C12):DG(D6) DC(C13):DG(D5) DC(C14):DG(D4) DA(C15):DT(D3) DT(C16):DA(D2) DG(C17):DC(D1) chainB ( 16) ARG54 0 0 0 0 0 0 0 0 0 0 2 8 10 0 0 0 0 ( 18) ARG56 0 0 0 0 0 0 0 0 0 0 0 0 10 2 0 0 0 ( 19) TYR57 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 ( 21) CYS59 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 ( 22) GLU60 0 0 0 0 0 0 0 0 0 0 11 6 0 0 0 0 0 ( 26) HIS64 0 0 0 0 0 0 0 0 0 0 0 0 3 11 3 0 0 (203) LYS241 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 prot.sequence gpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhrqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >8tkn_B:p53-like_transcription_factors;E_set_domains; title=MURINE NF-KAPPAB P50 REL HOMOLOGY REGION HOMODIMER IN COMPLEX WITH 10- MER KAPPAB DNA FROM HUMAN NEUTROPHIL GELATINASE-ASSOCIATED LIPOCALIN (NGAL) PROMOTER organism=Mus musculus DNA sequence DG(C1):DC(D10) DG(C2):DC(D9) DG(C3):DC(D8) DA(C4):DT(D7) DA(C5):DT(D6) DT(C6):DA(D5) DG(C7):DC(D4) DT(C8):DA(D3) DC(C9):DG(D2) DC(C10):DG(D1) DG(E1):DC(F10) DG(E2):DC(F9) DG(E3):DC(F8) DA(E4):DT(F7) DA(E5):DT(F6) DT(E6):DA(F5) DG(E7):DC(F4) DT(E8):DA(F3) DC(E9):DG(F2) DC(E10):DG(F1) chainB ( 16) ARG54 0 0 0 0 0 0 0 3 13 9 0 0 0 0 0 0 0 0 0 0 ( 18) ARG56 0 0 0 0 0 0 0 0 1 12 0 0 0 0 0 0 0 0 0 0 ( 19) TYR57 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 ( 21) CYS59 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 ( 22) GLU60 0 0 0 0 0 0 0 9 6 0 0 0 0 0 0 0 0 0 0 0 ( 26) HIS64 0 0 0 0 0 0 0 0 0 6 10 0 0 0 0 0 0 0 0 0 (203) LYS241 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 (234) LYS272 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (267) ARG305 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence gpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdKvqkddiqirfyeeeenggvwegfgdfsptdvhRqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype >8tp8_AB: title=STRUCTURE OF THE C. CRESCENTUS WYL-ACTIVATOR, DRID, BOUND TO SSDNA AND COGNATE DNA organism=Caulobacter vibrioides DNA sequence DT(R2):DA(U20) DA(R3):DT(U19) DC(R4):DG(U18) DG(R5):DC(U17) DA(R6):DT(U16) DC(R7):DG(U15) DA(R8):DT(U14) DG(R9):DC(U13) DT(R10):DA(U12) DA(R11):DT(U11) DA(R12):DT(U10) DC(R13):DG(U9) DT(R14):DA(U8) DG(R15):DC(U7) DT(R16):DA(U6) DC(R17):DG(U5) DG(R18):DC(U4) DT(R19):DA(U3) DA(R20):DT(U2) DT(R21):DA(U1) chainA ( 37) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 14 17 0 0 0 ( 38) THR38 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 ( 40) GLU40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 ( 41) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 7 10 1 0 0 0 0 0 chainB ( 34) ARG37 0 0 12 11 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 37) GLU40 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG41 0 0 0 0 0 8 9 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mrhekatrlldlarmlagsaegltldemaaalgvgrRTaERmrdavwaafpqmeaiddpptkrfripsgldfqtptaeelaalrvaadslrasgadarasslyaleakllsalrgsarrrvapdvealvqaetiavhagprpyedqavlgairaaikglqalsfryeggstpgrtrevtplgvlfgrsnylvalegkggkprswrldrmsdlkvldkpapppqdfslqafadesfgiyhdeiqdvvlrihksraedalrwrfhatqqvtpeadgsvlvtfraggmrelswhlftwgdaveivapqvlkdmmvqelreagrahgaw/ekatrlldlarmlagsaegltldemaaalgvgrRtaERmrdavwaafpqmeaiddpptkrfripsgldgvfqtptaeelaalrvaadslrasgadarasslyaleakllsalrgsarrrvapdvealvqaetiavhagprpyedqavlgairaaikglqalsfryeggstpgrtrevtplgvlfgrsnylvalegkggkprswrldrmsdlkvldkpapppqdfslqafadesfgiyhdeiqdvvlrihksraedalrwrfhatqqvtpeadgsvlvtfraggmrelswhlftwgdaveivapqvlkdmmvqelreagrahgaw >8tp8_CD: title=STRUCTURE OF THE C. CRESCENTUS WYL-ACTIVATOR, DRID, BOUND TO SSDNA AND COGNATE DNA organism=Caulobacter vibrioides DNA sequence DA(F1):DT(T21) DT(F2):DA(T20) DA(F3):DT(T19) DC(F4):DG(T18) DG(F5):DC(T17) DA(F6):DT(T16) DC(F7):DG(T15) DA(F8):DT(T14) DG(F9):DC(T13) DT(F10):DA(T12) DT(F11):DA(T11) DA(F12):DT(T10) DC(F13):DG(T9) DT(F14):DA(T8) DG(F15):DC(T7) DT(F16):DA(T6) DC(F17):DG(T5) DG(F18):DC(T4) DT(F19):DA(T3) DA(F20):DT(T2) DT(F21):DA(T1) chainC ( 34) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 13 0 0 0 ( 37) GLU40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 ( 38) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 0 9 9 2 0 0 0 0 0 chainD ( 37) ARG36 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG37 0 0 0 20 12 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLU40 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG41 0 0 0 0 0 2 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence ekatrlldlarmlagsaegltldemaaalgvgrRtaERmrdavwaafpqmeaiddpptkrfripsgldgvfqtptaeelaalrvaadslrasgadarasslyaleakllsalrgsarrrvapdvealvqaetiavhagprpyedqavlgairaaikglqalsfryeggstpgrtrevtplgvlfgrsnylvalegkggkprswrldrmsdlkvldkpapppqdfslqafadesfgiyhdeiqdvvlrihksraedalrwrfhatqqvtpeadgsvlvtfraggmrelswhlftwgdaveivapqvlkdmmvqelreagrahgaw/hmrhekatrlldlarmlagsaegltldemaaalgvgRRtaERmrdavwaafpqmeaiddpptkrfripsgldfqtptaeelaalrvaadslrasgadarasslyaleakllsalrgsarrrvapdvealvqaetiavhagprpyedqavlgairaaikglqalsfryeggstpgrtrevtplgvlfgrsnylvalegkggkprswrldrmsdlkvldkpapppqdfslqafadesfgiyhdeiqdvvlrihksraedalrwrfhatqqvtpeadgsvlvtfraggmrelswhlftwgdaveivapqvlkdmmvqelreagrahgaw >8tp8_D: title=STRUCTURE OF THE C. CRESCENTUS WYL-ACTIVATOR, DRID, BOUND TO SSDNA AND COGNATE DNA organism=Caulobacter vibrioides DNA sequence DA(F1):DT(T21) DT(F2):DA(T20) DA(F3):DT(T19) DC(F4):DG(T18) DG(F5):DC(T17) DA(F6):DT(T16) DC(F7):DG(T15) DA(F8):DT(T14) DG(F9):DC(T13) DT(F10):DA(T12) DT(F11):DA(T11) DA(F12):DT(T10) DC(F13):DG(T9) DT(F14):DA(T8) DG(F15):DC(T7) DT(F16):DA(T6) DC(F17):DG(T5) DG(F18):DC(T4) DT(F19):DA(T3) DA(F20):DT(T2) DT(F21):DA(T1) chainD ( 37) ARG36 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 38) ARG37 0 0 0 20 12 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 41) GLU40 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 42) ARG41 0 0 0 0 0 2 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence hmrhekatrlldlarmlagsaegltldemaaalgvgRRtaERmrdavwaafpqmeaiddpptkrfripsgldfqtptaeelaalrvaadslrasgadarasslyaleakllsalrgsarrrvapdvealvqaetiavhagprpyedqavlgairaaikglqalsfryeggstpgrtrevtplgvlfgrsnylvalegkggkprswrldrmsdlkvldkpapppqdfslqafadesfgiyhdeiqdvvlrihksraedalrwrfhatqqvtpeadgsvlvtfraggmrelswhlftwgdaveivapqvlkdmmvqelreagrahgaw >8tpk_A: title=P6522 CRYSTAL FORM OF C. CRESCENTUS DRID-SSDNA-DNA COMPLEX organism=Caulobacter vibrioides DNA sequence DT(R2):DA(U20) DC(R4):DG(U18) DG(R5):DC(U17) DA(R6):DT(U16) DC(R7):DG(U15) DA(R8):DT(U14) DG(R9):DC(U13) DT(R10):DA(U12) DA(R11):DT(U11) DA(R12):DT(U10) DC(R13):DG(U9) DT(R14):DA(U8) DG(R15):DC(U7) DT(R16):DA(U6) DC(R17):DG(U5) DG(R18):DC(U4) DT(R19):DA(U3) DA(R20):DT(U2) chainA ( 36) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 5 4 15 19 0 0 ( 39) GLU40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 ( 40) ARG41 0 0 0 0 0 0 0 0 0 0 0 7 10 0 0 0 0 0 prot.sequence rhekatrlldlarmlagsaegltldemaaalgvgrRtaERmrdavwaafpqmeaiddpptkrfripqtptaeelaalrvaadslrasgadarasslyaleakllsalrgsarrrvapdvealvqaetiavhagprpyedqavlgairaaikglqalsfryeggstpgrtrevtplgvlfgrsnylvalegkggkprswrldrmsdlkvldkpapppqdfslqafadesfgiyhdeiqdvvlrihksraedalrwrfhatqqvtpeadgsvlvtfraggmrelswhlftwgdaveivapqvlkdmmvqelreagrahgaw >8tpk_AB: title=P6522 CRYSTAL FORM OF C. CRESCENTUS DRID-SSDNA-DNA COMPLEX organism=Caulobacter vibrioides DNA sequence DT(U2):DA(R20) DA(U3):DT(R19) DC(U4):DG(R18) DG(U5):DC(R17) DA(U6):DT(R16) DC(U7):DG(R15) DA(U8):DT(R14) DG(U9):DC(R13) DT(U10):DA(R12) DT(U11):DA(R11) DA(U12):DT(R10) DC(U13):DG(R9) DT(U14):DA(R8) DG(U15):DC(R7) DT(U16):DA(R6) DC(U17):DG(R5) DG(U18):DC(R4) DA(U20):DT(R2) chainA ( 36) ARG37 0 0 19 15 4 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) GLU40 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ARG41 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 0 0 0 chainB ( 36) ARG37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 3 16 0 ( 39) GLU40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 40) ARG41 0 0 0 0 0 0 0 0 0 0 0 0 4 7 3 0 0 0 prot.sequence rhekatrlldlarmlagsaegltldemaaalgvgrRtaERmrdavwaafpqmeaiddpptkrfripqtptaeelaalrvaadslrasgadarasslyaleakllsalrgsarrrvapdvealvqaetiavhagprpyedqavlgairaaikglqalsfryeggstpgrtrevtplgvlfgrsnylvalegkggkprswrldrmsdlkvldkpapppqdfslqafadesfgiyhdeiqdvvlrihksraedalrwrfhatqqvtpeadgsvlvtfraggmrelswhlftwgdaveivapqvlkdmmvqelreagrahgaw/rhekatrlldlarmlagsaegltldemaaalgvgrRtaERmrdavwaafpqmeaiddpptkrfripsgldgvfqtptaeelaalrvaadslrasgadarasslyaleakllsalrgsarrrvapdvealvqaetiavhagprpyedqavlgairaaikglqalsfryeggstpgrtrevtplgvlfgrsnylvalegkggkprswrldrmsdlkvldkpapppqdfslqafadesfgiyhdeiqdvvlrihksraedalrwrfhatqqvtpeadgsvlvtfraggmrelswhlftwgdaveivapqvlkdmmvqelreagrahgaw >8trg_H:P-loop_containing_nucleoside_triphosphate_hydrolases;RecA_protein,_C-terminal_domain; title=STRUCTURE OF FULL-LENGTH LEXA BOUND TO A RECA FILAMENT organism=? DNA sequence DT(L1002) DG(L1003) DG(L1004) DT(L1005) DG(L1006) DG(L1007) DT(L1008) DG(L1009) DG(L1010) DT(L1011) DG(L1012) DG(L1013) DT(L1014) DG(L1015) DG(L1016) DT(L1017) DG(L1018) DG(L1019) DT(L1020) DG(L1021) DG(L1022) DT(L1023) DG(L1024) DG(L1025) DT(L1026) DG(L1027) DG(L1028) chainH (162) MET164 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (167) ARG169 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (195) MET197 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (197) ILE199 0 0 0 0 22 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence denkqkalaaalgqiekqfgkgsimrlgedrsmdvetistgslsldialgagglpmgriveiygpessgkttltlqviaaaqregktcafidaehaldpiyarklgvdidnllcsqpdtgeqaleicdalarsgavdvivvdsvaaltpkaeiegeigdshMglaaRmmsqamrklagnlkqsntllifinqirMkIgvmfgnpetttggnalkfyasvrldirrigavkegenvvgsetrvkvvknkiaapfkqaefqilygeginfygelvdlgvkekliekagawysykgekigqgkanatawlkdnpetakeiekkvrell >8u5y_A:Nucleic_acid-binding_proteins; title=HUMAN RADX TRIMER BOUND TO SSDNA organism=? DNA sequence DT(D-1) DT(D0) DT(D1) DT(D2) DT(D3) DT(D4) DT(D5) DT(D6) DT(D7) DT(D8) DT(D9) DT(D10) DT(D11) DT(D12) DT(D13) DT(D14) chainA (203) ARG248 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (205) TYR250 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (217) GLN262 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 (232) ILE277 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (234) TRP279 0 0 0 0 0 0 0 0 0 0 0 0 0 59 18 0 (235) ASN280 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (259) LYS304 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 (262) TYR307 0 0 0 0 0 0 0 0 0 0 0 6 26 0 0 0 (264) PHE309 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 (265) ARG310 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (266) ILE311 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (286) ASN331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (288) ARG333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 18 (351) ARG396 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 prot.sequence rswiqkvleqimdsprqcvtpsevvpvtvlavqrylledeprdtvpkpplycydvtisdgvyqekcyldpslnslvyqnilkvgiqmrisrvsclynigqgilcidnvhcgetsdsisletpfrnrahqekperplrggkshylalwnnedpygdiwltdkqpeehnfsdtkiislshlemtwtnrrnfpallvrilhksklRyYgkpdkkmiepyQtflevadssgtvsvImWNalcpewykslrvglvlllqdysvKksYpFRIqpvpvdpqiklistmeiclNlRdpptniiiipekqvkpewrlpklnhrfttrselddmpencicdvigllvfvgrvqrskkkenRedfwsyrwihiadgtseqpfivelfstsqpeifeniypmayfvctqlkvvrndnqvpkllyltttnesgvfitghrgqpytydakvknfiqwirtksdsgeqknmviggyypyppvpetfskysssikveslltaisevrkeiedlqyreqkriaiqgiitaikyiphssisdrwesqlwrekkfglidhlhysrvypesiprkfmfehrkflsdqynsqpakyvppegrppklddfksarslghfevtilglnheiaidvaflpmycpedirtsqidtlltsmnyscaypqdttgndrlpgpravagdiikaateldrvhivgildicnlgnnkvevylhkiysp >8u5y_ABC: title=HUMAN RADX TRIMER BOUND TO SSDNA organism=? DNA sequence DT(D-1) DT(D0) DT(D1) DT(D2) DT(D3) DT(D4) DT(D5) DT(D6) DT(D7) DT(D8) DT(D9) DT(D10) DT(D11) DT(D12) DT(D13) DT(D14) chainB (206) ARG248 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 (208) TYR250 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 (210) LYS252 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 (220) GLN262 0 0 0 0 0 0 5 12 0 0 0 0 0 0 0 0 (222) PHE264 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (235) ILE277 0 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 (237) TRP279 0 0 0 0 0 0 0 61 1 0 0 0 0 0 0 0 (238) ASN280 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 (260) SER302 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (262) LYS304 0 0 0 0 0 0 6 0 1 0 0 0 0 0 0 0 (265) TYR307 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 (285) GLU327 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 (291) ARG333 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 (352) GLU394 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 (353) ASN395 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 chainA (203) ARG248 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (205) TYR250 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 (217) GLN262 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 (232) ILE277 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 (234) TRP279 0 0 0 0 0 0 0 0 0 0 0 0 0 59 18 0 (235) ASN280 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 (259) LYS304 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 (262) TYR307 0 0 0 0 0 0 0 0 0 0 0 6 26 0 0 0 (264) PHE309 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 (265) ARG310 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 (266) ILE311 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 (286) ASN331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 (288) ARG333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 18 (351) ARG396 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 chainC (206) ARG248 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (208) TYR250 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (220) GLN262 12 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (222) PHE264 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (235) ILE277 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) TRP279 0 61 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (265) TYR307 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (268) ARG310 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (291) ARG333 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence rswiqkvleqimdsprqcvtpsevvpvtvlavqrylledeprdtvpkpplycydvtisdgvyqekcyldpslnslvyqnilkvgiqmrisrvsclynigqgilcidnvhcgetsdsisletpfrnrahqekperplrggkshylalwnnedpygdiwltdkqpeehnfsdtkiislshlemtwtnrrnfpallvrilhksklRyYgkpdkkmiepyQtflevadssgtvsvImWNalcpewykslrvglvlllqdysvKksYpFRIqpvpvdpqiklistmeiclNlRdpptniiiipekqvkpewrlpklnhrfttrselddmpencicdvigllvfvgrvqrskkkenRedfwsyrwihiadgtseqpfivelfstsqpeifeniypmayfvctqlkvvrndnqvpkllyltttnesgvfitghrgqpytydakvknfiqwirtksdsgeqknmviggyypyppvpetfskysssikveslltaisevrkeiedlqyreqkriaiqgiitaikyiphssisdrwesqlwrekkfglidhlhysrvypesiprkfmfehrkflsdqynsqpakyvppegrppklddfksarslghfevtilglnheiaidvaflpmycpedirtsqidtlltsmnyscaypqdttgndrlpgpravagdiikaateldrvhivgildicnlgnnkvevylhkiysp/rswiqkvleqimdsprqcvtpsevvpvtvlavqrylledeprdtvpkpplycydvtisdgvyqekcyldpslnslvyqnilkvgiqmrisrvsclynekrigqgilcidnvhcgetsdsisletpfrnrahqekperplrggkshylalwnnedpygdiwltdkqpeehnfsdtkiislshlemtwtnrrnfpallvrilhksklRyYgKpdkkmiepyQtFlevadssgtvsvImWNalcpewykslrvglvlllqdySvKksYpfriqpvpvdpqiklistmEiclnlRdpptniiiipekqvkpewrlpklnhrfttrselddmpencicdvigllvfvgrvqrskkkENredfwsyrwihiadgtseqpfivelfstsqpeifeniypmayfvctqlkvvrndnqvpkllyltttnesgvfitghrgqpytydakvknfiqwirtksdsgeqknmviggyypyppvpetfskysssikveslltaisevrkeiedlqyreqkriaiqgiitaikyiphssisdrwesqlwrekkfglidhlhysrvypesiprkfmfehrkflsdqynsqpakyvppegrppklddfksarslghfevtilglnheiaidvaflpmycpedirtsqidtlltsmnyscaypqdttgndrlpgpravagdiikaateldrvhivgildicnlgnnkvevylhkiysp/rswiqkvleqimdsprqcvtpsevvpvtvlavqrylledeprdtvpkpplycydvtisdgvyqekcyldpslnslvyqnilkvgiqmrisrvsclynekrigqgilcidnvhcgetsdsisletpfrnrahqekperplrggkshylalwnnedpygdiwltdkqpeehnfsdtkiislshlemtwtnrrnfpallvrilhksklRyYgkpdkkmiepyQtFlevadssgtvsvImWnalcpewykslrvglvlllqdysvkksYpfRiqpvpvdpqiklistmeiclnlRdpptniiiipekqvkpewrlpklnhrfttrselddmpencicdvigllvfvgrvqrskkkenredfwsyrwihiadgtseqpfivelfstsqpeifeniypmayfvctqlkvvrndnqvpkllyltttnesgvfitghrgqpytydakvknfiqwirtksdsgeqknmviggyypyppvpetfskysssikveslltaisevrkeiedlqyreqkriaiqgiitaikyiphsisdrwesqglidhlhysrvypesiprkfmfehrkflsdqynsqpakyvppegrppklddfksarslghfevtilglnheiaidvaflpmycpedirtsqidtlltsmnyscaypqdttgndrlpgpravagdiikaateldrvhivgildicnlgnnkvevylhkiysp >8ucu_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=PARTIAL DNA TERMINATION SUBCOMPLEX OF XENOPUS LAEVIS DNA POLYMERASE ALPHA-PRIMASE organism=? DNA sequence DC(D20):DG(C26) DG(D21):DC(C25) DA(D22):DT(C24) DT(D23):DA(C23) DT(D24):DA(C22) DG(D25):DC(C21) DT(D26):DA(C20) DA(D27):DT(C19) DG(D28):DC(C18) chainA (675) LYS1049 0 0 0 0 0 0 0 5 5 (703) ARG1077 0 0 0 0 0 6 5 0 0 prot.sequence qvfrfywldayedqysqpgvvylfgkvwiesadayvsccvsvkniertvyllprenrvqlstgkdtgapvsmmhvyqefneavaekykimkfkskkvdkdyafeipdvpasseylevrysadspqlpqdlkgetfshvfgtntsslelfllsrkikgpswleikspqlssqpmswckveavvtrpdqvsvvkdlapppvvvlslsmktvqnakthqneivaiaalvhhtfpldkappqppfqthfcvlsklndcifpydyneavkqknanieialtertllgfflakihkidpdvivghdiygfdlevllqrinsckvpfwskigrlrrsvmpklggrsgfaernaacgriicdieisakelircksyhlselvhqilkaervvippenirnayndsvhllymlentwidakfilqimcelnvlplalqitniagnvmsrtlmggrserneylllhaftennfivpdkpvaayagglvlepkvgfydkfillldfnslypsiiqeynicfttvhreadeipelphsdlemgilpreirklverrrhvkqlmkqpdlnpdlylqydirqkalkltansmygclgfsysrfyakplaalvthqgreillhtkemvqkmnleviygdtdsimintncnnleevfklgnrvkseinksyklleididgifksllllkkKkyaaltveptgdgkyvtkqelkgldivRrdwcelakqagnyvisqilsdqprdsiveniqkklteigenvtngtvpitqyeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtisyvicqdgsnlsasqrayaqeqlqkqenlsidtqyylsqqvhpvvaricepidgidsaliamwlgldpsqf >8ucv_AB: title=COMPLETE DNA TERMINATION SUBCOMPLEX 1 OF XENOPUS LAEVIS DNA POLYMERASE ALPHA-PRIMASE organism=? DNA sequence DT(C13) DG(C14) DT(C15) DC(C16) DG(C17) DC(C18) DT(C19) DA(C20) DC(C21) DA(C22) DA(C23) DT(C24) DC(C25) DG(C26) DC(C27) DT(C28) DA(C29) DA(C30) DG(C31) DT(C32) DT(C33) DC(C34) DA(C35) DC(C36) DG(C37) DC(C38) DA(C39) DG(C40) DT(C41) DA(C42) DT(C43) DC(C44) DC(C45) DT(C46) DG(C47) DT(C48) chainA (338) ARG676 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG784 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (573) LEU947 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (577) SER951 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (584) PHE958 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (586) TYR960 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (675) LYS1049 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (703) ARG1077 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB ( 33) HIS309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 37) MET313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 ( 77) TYR353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 ( 81) HIS357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 ( 82) ASN358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 90) THR366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 92) TYR368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 93) THR369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 prot.sequence qvfrfywldayedqysqpgvvylfgkvwiesadayvsccvsvkniertvyllprenrvqlstgkdtgapvsmmhvyqefneavaekykimkfkskkvdkdyafeipdvpasseylevrysadspqlpqdlkgetfshvfgtntsslelfllsrkikgpswleikspqlssqpmswckveavvtrpdqvsvvkdlapppvvvlslsmktvqnakthqneivaiaalvhhtfpldkappqppfqthfcvlsklndcifpydyneavkqknanieialtertllgfflakihkidpdvivghdiygfdlevllqrinsckvpfwskigrlrrsvmpklggRsgfaernaacgriicdieisakelircksyhlselvhqilkaervvippenirnayndsvhllymlentwidakfilqimcelnvlplalqitniagnvmsrtlmggRserneylllhaftennfivpdkpvaayagglvlepkvgfydkfillldfnslypsiiqeynicfttvhreadeipelphsdlemgilpreirklverrrhvkqlmkqpdlnpdlylqydirqkalkLtanSmygclgFsYsrfyakplaalvthqgreillhtkemvqkmnleviygdtdsimintncnnleevfklgnrvkseinksyklleididgifksllllkkKkyaaltveptgdgkyvtkqelkgldivRrdwcelakqagnyvisqilsdqprdsiveniqkklteigenvtngtvpitqyeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtisyvicqdgsnlsasqrayaqeqlqkqenlsidtqyylsqqvhpvvaricepidgidsaliamwlgldpsqf/isleqidgfaaksfplcmrqlhkslrenhhlrHggrMqyglflkgigltleqalqfwrleftkgkvdsekfdkvyaYsirHNygkegkrTdYTpyscmkvilsnppsqgdyhgcpfrhsdpellkqklqsfkvpssginqilelvkgmhyqlacqkyfelthsvddcgfslnhpnqyfaesqkllt >8ucv_B: title=COMPLETE DNA TERMINATION SUBCOMPLEX 1 OF XENOPUS LAEVIS DNA POLYMERASE ALPHA-PRIMASE organism=? DNA sequence DT(C13) DG(C14) DT(C15) DC(C16) DG(C17) DC(C18) DT(C19) DA(C20) DC(C21) DA(C22) DA(C23) DT(C24) DC(C25) DG(C26) DC(C27) DT(C28) DA(C29) DA(C30) DG(C31) DT(C32) DT(C33) DC(C34) DA(C35) DC(C36) DG(C37) DC(C38) DA(C39) DG(C40) DT(C41) DA(C42) DT(C43) DC(C44) DC(C45) DT(C46) DG(C47) DT(C48) chainB ( 33) HIS309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 ( 37) MET313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 ( 77) TYR353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 ( 81) HIS357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 ( 82) ASN358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 ( 90) THR366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 ( 92) TYR368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 ( 93) THR369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 3 prot.sequence isleqidgfaaksfplcmrqlhkslrenhhlrHggrMqyglflkgigltleqalqfwrleftkgkvdsekfdkvyaYsirHNygkegkrTdYTpyscmkvilsnppsqgdyhgcpfrhsdpellkqklqsfkvpssginqilelvkgmhyqlacqkyfelthsvddcgfslnhpnqyfaesqkllt >8ucw_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=COMPLETE DNA TERMINATION SUBCOMPLEX 2 OF XENOPUS LAEVIS DNA POLYMERASE ALPHA-PRIMASE organism=? DNA sequence DT(C13) DG(C14) DT(C15) DC(C16) DG(C17) DC(C18) DT(C19) DA(C20) DC(C21) DA(C22) DA(C23) DT(C24) DC(C25) DG(C26) DC(C27) DT(C28) DA(C29) DA(C30) DG(C31) DT(C32) DT(C33) DC(C34) DA(C35) DC(C36) DG(C37) DC(C38) DA(C39) DG(C40) DT(C41) DA(C42) DT(C43) DC(C44) DC(C45) chainA (338) ARG676 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (446) ARG784 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (573) LEU947 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (577) SER951 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (579) TYR953 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (584) PHE958 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (586) TYR960 0 0 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (675) LYS1049 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (703) ARG1077 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence qvfrfywldayedqysqpgvvylfgkvwiesadayvsccvsvkniertvyllprenrvqlstgkdtgapvsmmhvyqefneavaekykimkfkskkvdkdyafeipdvpasseylevrysadspqlpqdlkgetfshvfgtntsslelfllsrkikgpswleikspqlssqpmswckveavvtrpdqvsvvkdlapppvvvlslsmktvqnakthqneivaiaalvhhtfpldkappqppfqthfcvlsklndcifpydyneavkqknanieialtertllgfflakihkidpdvivghdiygfdlevllqrinsckvpfwskigrlrrsvmpklggRsgfaernaacgriicdieisakelircksyhlselvhqilkaervvippenirnayndsvhllymlentwidakfilqimcelnvlplalqitniagnvmsrtlmggRserneylllhaftennfivpdkpvaayagglvlepkvgfydkfillldfnslypsiiqeynicfttvhreadeipelphsdlemgilpreirklverrrhvkqlmkqpdlnpdlylqydirqkalkLtanSmYgclgFsYsrfyakplaalvthqgreillhtkemvqkmnleviygdtdsimintncnnleevfklgnrvkseinksyklleididgifksllllkkKkyaaltveptgdgkyvtkqelkgldivRrdwcelakqagnyvisqilsdqprdsiveniqkklteigenvtngtvpitqyeinkaltkdpqdypdkkslphvhvalwinsqggrkvkagdtisyvicqdgsnlsasqrayaqeqlqkqenlsidtqyylsqqvhpvvaricepidgidsaliamwlgldpsqf >8uh7_A: title=STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER BOUND TO THE T4 CLAMP, PRIMER-TEMPLATE DNA, AND ATP ANALOG organism=? DNA sequence DG(J1):DC(I30) DC(J2):DG(I29) DA(J3):DT(I28) DG(J4):DC(I27) DA(J5):DT(I26) DC(J6):DG(I25) DA(J7):DT(I24) DC(J8):DG(I23) DT(J9):DA(I22) DA(J10):DT(I21) DC(J11):DG(I20) DG(J12):DC(I19) DA(J13):DT(I18) DG(J14):DC(I17) DT(J15):DA(I16) DA(J16):DT(I15) DC(J17):DG(I14) DA(J18):DT(I13) DT(J19):DA(I12) DA(J20):DT(I11) chainA ( 62) PHE63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 prot.sequence slfkddiqlnehqvawyskdwtavqsaadsfkekaeneffeiigainnktkcsiaqkdyskFmvenalsqfpecmpavyamnligsglsdeahfnylmaavprgkrygkwaklvedstevliikllakryqvntndainyksiltkngklplvlkelkglvtddflkevtknvkeqkqlkklalew >8uh7_ABCDE: title=STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER BOUND TO THE T4 CLAMP, PRIMER-TEMPLATE DNA, AND ATP ANALOG organism=? DNA sequence DT(I11):DA(J20) DA(I12):DT(J19) DT(I13):DA(J18) DG(I14):DC(J17) DT(I15):DA(J16) DA(I16):DT(J15) DC(I17):DG(J14) DT(I18):DA(J13) DC(I19):DG(J12) DG(I20):DC(J11) DT(I21):DA(J10) DA(I22):DT(J9) DG(I23):DC(J8) DT(I24):DA(J7) DG(I25):DC(J6) DT(I26):DA(J5) DC(I27):DG(J4) DT(I28):DA(J3) DG(I29):DC(J2) DC(I30):DG(J1) chainA ( 62) PHE63 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD chainE (294) ALA299 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (295) ASN300 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence slfkddiqlnehqvawyskdwtavqsaadsfkekaeneffeiigainnktkcsiaqkdyskFmvenalsqfpecmpavyamnligsglsdeahfnylmaavprgkrygkwaklvedstevliikllakryqvntndainyksiltkngklplvlkelkglvtddflkevtknvkeqkqlkklalew/mitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakAlchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/smitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvaKalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/mitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakAlchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/itvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaANtelhlaylfiqlacemqwk >8uk9_ABCDE: title=STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER MUTANT D110C BOUND TO THE T4 CLAMP, PRIMER-TEMPLATE DNA, AND ATP ANALOG organism=? DNA sequence DG(J1):DG(I29) DC(J2):DT(I28) DG(J4):DC(I27) DA(J5):DT(I26) DC(J6):DG(I25) DA(J7):DT(I24) DC(J8):DG(I23) DT(J9):DA(I22) DA(J10):DT(I21) DC(J11):DG(I20) DG(J12):DC(I19) DA(J13):DT(I18) DG(J14):DC(I17) DT(J15):DA(I16) DA(J16):DT(I15) DC(J17):DG(I14) DA(J18):DT(I13) DT(J19):DA(I12) chainA ( 62) PHE63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 chainB chainC chainD chainE prot.sequence slfkddiqlnehqvawyskdwtavqsaadsfkekaeneffeiigainnktkcsiaqkdyskFmvenalsqfpecmpavyamnligsglsdeahfnylmaavprgkrygkwedstevliikllakryqvntndainyksiltkngklplvlkelkglvtddflkevtknvkeqkqlkklalew/mitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakAlchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefcrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/smitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvaKalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefcrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/itvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakaLchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefcrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/itvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakaLchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefcrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk >8uk9_KLMNQ: title=STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER MUTANT D110C BOUND TO THE T4 CLAMP, PRIMER-TEMPLATE DNA, AND ATP ANALOG organism=? DNA sequence DA(O12):DT(P19) DT(O13):DA(P18) DG(O14):DC(P17) DT(O15):DA(P16) DA(O16):DT(P15) DC(O17):DG(P14) DT(O18):DA(P13) DC(O19):DG(P12) DG(O20):DC(P11) DT(O21):DA(P10) DA(O22):DT(P9) DG(O23):DC(P8) DT(O24):DA(P7) DG(O25):DC(P6) DT(O26):DA(P5) DC(O27):DG(P4) DT(O28):DA(P3) DG(O29):DC(P2) DC(O30):DG(P1) chainK chainL (117) GLU116 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chainM chainN chainQ ( 58) LYS62 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefcrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/smitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefcrsglaEsqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/mitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefcrsglaeSqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/itvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakalchdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefcrsglaesQrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvlaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/lfkddiqlnehqvawyskdwtavqsaadsfkekaeneffeiigainnktkcsiaqksKfmvenalsqfpecmpavyamnligsglsdeahfnylmaavprgkrygkwaklvedstevliikllakryqvntndainyksiltkngklplvlkelkglvtddflkevtknvkeqkqlkklalew >8unf_ABCDE: title=CRYO-EM STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER WITH SLIDING CLAMP AND DNA organism=? DNA sequence DG(J1):DC(I30) DC(J2):DG(I29) DA(J3):DT(I28) DG(J4):DC(I27) DA(J5):DT(I26) DC(J6):DG(I25) DA(J7):DT(I24) DC(J8):DG(I23) DT(J9):DA(I22) DA(J10):DT(I21) DC(J11):DG(I20) DG(J12):DC(I19) DA(J13):DT(I18) DG(J14):DC(I17) DT(J15):DA(I16) DA(J16):DT(I15) DC(J17):DG(I14) DA(J18):DT(I13) DT(J19):DA(I12) DA(J20):DT(I11) chainE chainD chainC chainB chainA ( 63) PHE63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 ( 64) MET64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 prot.sequence mslfkddiqlnehqvawyskdwtavqsaadsfkekaeneffeiigainnktkcsiaqkdyskFMvenalsqfpecmpavyamnligsglsdeahfnylmaavprgkrygkwaklvedstevliikllakryqvntndainyksiltkngklplvlkelkglvtddflkevtknvkeqkqlkklalew/mitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakaLChdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/mitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakaLChdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/mitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakaLChdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk/mitvnekehileqkyrpstidecilpafdketfksitskgkiphiilhspspgtgkttvakaLChdvnadmmfvngsdckidfvrgpltnfasaasfdgrqkvividefdrsglaesqrhlrsfmeayssncsiiitannidgiikplqsrcrvitfgqptdedkiemmkqmirrlteickhegiaiadmkvvaalvkknfpdfrktigeldsysskgvldagilslvtndrgaiddvleslknkdvkqlralapkyaadyswfvgklaeeiysrvtpqsiirmyeivgennqyhgiaantelhlaylfiqlacemqwk >8ux1_ABCDEFGH: title=CRYO-EM STRUCTURE OF RAN BOUND TO RCC1 AND THE NUCLEOSOME CORE PARTICLE organism=? DNA sequence DC(J-73):DG(I73) DT(J-72):DA(I72) DG(J-71):DC(I71) DG(J-70):DC(I70) DA(J-69):DT(I69) DG(J-68):DC(I68) DA(J-67):DT(I67) DA(J-66):DT(I66) DT(J-65):DA(I65) DC(J-64):DG(I64) DC(J-63):DG(I63) DC(J-62):DG(I62) DG(J-61):DC(I61) DG(J-60):DC(I60) DT(J-59):DA(I59) DG(J-58):DC(I58) DC(J-57):DG(I57) DC(J-56):DG(I56) DG(J-55):DC(I55) DA(J-54):DT(I54) DG(J-53):DC(I53) DG(J-52):DC(I52) DC(J-51):DG(I51) DC(J-50):DG(I50) DG(J-49):DC(I49) DC(J-48):DG(I48) DT(J-47):DA(I47) DC(J-46):DG(I46) DA(J-45):DT(I45) DA(J-44):DT(I44) DT(J-43):DA(I43) DT(J-42):DA(I42) DG(J-41):DC(I41) DG(J-40):DC(I40) DT(J-39):DA(I39) DC(J-38):DG(I38) DG(J-37):DC(I37) DT(J-36):DA(I36) DA(J-35):DT(I35) DG(J-34):DC(I34) DA(J-33):DT(I33) DC(J-32):DG(I32) DA(J-31):DT(I31) DG(J-30):DC(I30) DC(J-29):DG(I29) DT(J-28):DA(I28) DC(J-27):DG(I27) DT(J-26):DA(I26) DA(J-25):DT(I25) DG(J-24):DC(I24) DC(J-23):DG(I23) DA(J-22):DT(I22) DC(J-21):DG(I21) DC(J-20):DG(I20) DG(J-19):DC(I19) DC(J-18):DG(I18) DT(J-17):DA(I17) DT(J-16):DA(I16) DA(J-15):DT(I15) DA(J-14):DT(I14) DA(J-13):DT(I13) DC(J-12):DG(I12) DG(J-11):DC(I11) DC(J-10):DG(I10) DA(J-9):DT(I9) DC(J-8):DG(I8) DG(J-7):DC(I7) DT(J-6):DA(I6) DA(J-5):DT(I5) DC(J-4):DG(I4) DG(J-3):DC(I3) DC(J-2):DG(I2) DG(J-1):DC(I1) DC(J0):DG(I0) DT(J1):DA(I-1) DG(J2):DC(I-2) DT(J3):DA(I-3) DC(J4):DG(I-4) DC(J5):DG(I-5) DC(J6):DG(I-6) DC(J7):DG(I-7) DC(J8):DG(I-8) DG(J9):DC(I-9) DC(J10):DG(I-10) DG(J11):DC(I-11) DT(J12):DA(I-12) DT(J13):DA(I-13) DT(J14):DA(I-14) DT(J15):DA(I-15) DA(J16):DT(I-16) DA(J17):DT(I-17) DC(J18):DG(I-18) DC(J19):DG(I-19) DG(J20):DC(I-20) DC(J21):DG(I-21) DC(J22):DG(I-22) DA(J23):DT(I-23) DA(J24):DT(I-24) DG(J25):DC(I-25) DG(J26):DC(I-26) DG(J27):DC(I-27) DG(J28):DC(I-28) DA(J29):DT(I-29) DT(J30):DA(I-30) DT(J31):DA(I-31) DA(J32):DT(I-32) DC(J33):DG(I-33) DT(J34):DA(I-34) DC(J35):DG(I-35) DC(J36):DG(I-36) DC(J37):DG(I-37) DT(J38):DA(I-38) DA(J39):DT(I-39) DG(J40):DC(I-40) DT(J41):DA(I-41) DC(J42):DG(I-42) DT(J43):DA(I-43) DC(J44):DG(I-44) DC(J45):DG(I-45) DA(J46):DT(I-46) DG(J47):DC(I-47) DG(J48):DC(I-48) DC(J49):DG(I-49) DA(J50):DT(I-50) DC(J51):DG(I-51) DG(J52):DC(I-52) DT(J53):DA(I-53) DG(J54):DC(I-54) DC(J56):DG(I-56) DA(J57):DT(I-57) DG(J58):DC(I-58) DT(J60):DA(I-60) DA(J61):DT(I-61) DT(J62):DA(I-62) DA(J63):DT(I-63) DT(J64):DA(I-64) DA(J65):DT(I-65) DC(J66):DG(I-66) DA(J67):DT(I-67) DT(J68):DA(I-68) DC(J69):DG(I-69) DC(J70):DG(I-70) DT(J71):DA(I-71) chainA ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 29) LEU65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainB chainC chainD ( 2) LYS27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 4) ARG40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) TYR41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 ( 47) ARG83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF chainG chainH ( 2) LYS27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kphRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlsaihakrvtimpkdiqlarrirger/rkvLRdniqgitkpairrlarrggvkriSgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/kakSRsnraglqfpvgrihrllrkgnyaErvgagapvylaavmeylAaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllpkk/kKrkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk/kphRYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlsaihakrvtimpkdiqlarrirger/rkvLRdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg/gkaKSrsnraglqfpvgrihrllrkgnyaervgagapvylaavmeyLaaevlelagnaardnkktriiprhlqlairndeelnkllsgvtiaqggvlpniqavllpk/kKrkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >8ux1_H:Histone-fold; title=CRYO-EM STRUCTURE OF RAN BOUND TO RCC1 AND THE NUCLEOSOME CORE PARTICLE organism=? DNA sequence DA(I-71):DT(J71) DG(I-70):DC(J70) DG(I-69):DC(J69) DA(I-68):DT(J68) DT(I-67):DA(J67) DG(I-66):DC(J66) DT(I-65):DA(J65) DA(I-64):DT(J64) DT(I-63):DA(J63) DA(I-62):DT(J62) DT(I-61):DA(J61) DA(I-60):DT(J60) DC(I-58):DG(J58) DT(I-57):DA(J57) DG(I-56):DC(J56) DC(I-54):DG(J54) DA(I-53):DT(J53) DC(I-52):DG(J52) DG(I-51):DC(J51) DT(I-50):DA(J50) DG(I-49):DC(J49) DC(I-48):DG(J48) DC(I-47):DG(J47) DT(I-46):DA(J46) DG(I-45):DC(J45) DG(I-44):DC(J44) DA(I-43):DT(J43) DG(I-42):DC(J42) DA(I-41):DT(J41) DC(I-40):DG(J40) DT(I-39):DA(J39) DA(I-38):DT(J38) DG(I-37):DC(J37) DG(I-36):DC(J36) DG(I-35):DC(J35) DA(I-34):DT(J34) DG(I-33):DC(J33) DT(I-32):DA(J32) DA(I-31):DT(J31) DA(I-30):DT(J30) DT(I-29):DA(J29) DC(I-28):DG(J28) DC(I-27):DG(J27) DC(I-26):DG(J26) DC(I-25):DG(J25) DT(I-24):DA(J24) DT(I-23):DA(J23) DG(I-22):DC(J22) DG(I-21):DC(J21) DC(I-20):DG(J20) DG(I-19):DC(J19) DG(I-18):DC(J18) DT(I-17):DA(J17) DT(I-16):DA(J16) DA(I-15):DT(J15) DA(I-14):DT(J14) DA(I-13):DT(J13) DA(I-12):DT(J12) DC(I-11):DG(J11) DG(I-10):DC(J10) DC(I-9):DG(J9) DG(I-8):DC(J8) DG(I-7):DC(J7) DG(I-6):DC(J6) DG(I-5):DC(J5) DG(I-4):DC(J4) DA(I-3):DT(J3) DC(I-2):DG(J2) DA(I-1):DT(J1) DG(I0):DC(J0) DC(I1):DG(J-1) DG(I2):DC(J-2) DC(I3):DG(J-3) DG(I4):DC(J-4) DT(I5):DA(J-5) DA(I6):DT(J-6) DC(I7):DG(J-7) DG(I8):DC(J-8) DT(I9):DA(J-9) DG(I10):DC(J-10) DC(I11):DG(J-11) DG(I12):DC(J-12) DT(I13):DA(J-13) DT(I14):DA(J-14) DT(I15):DA(J-15) DA(I16):DT(J-16) DA(I17):DT(J-17) DG(I18):DC(J-18) DC(I19):DG(J-19) DG(I20):DC(J-20) DG(I21):DC(J-21) DT(I22):DA(J-22) DG(I23):DC(J-23) DC(I24):DG(J-24) DT(I25):DA(J-25) DA(I26):DT(J-26) DG(I27):DC(J-27) DA(I28):DT(J-28) DG(I29):DC(J-29) DC(I30):DG(J-30) DT(I31):DA(J-31) DG(I32):DC(J-32) DT(I33):DA(J-33) DC(I34):DG(J-34) DT(I35):DA(J-35) DA(I36):DT(J-36) DC(I37):DG(J-37) DG(I38):DC(J-38) DA(I39):DT(J-39) DC(I40):DG(J-40) DC(I41):DG(J-41) DA(I42):DT(J-42) DA(I43):DT(J-43) DT(I44):DA(J-44) DT(I45):DA(J-45) DG(I46):DC(J-46) DA(I47):DT(J-47) DG(I48):DC(J-48) DC(I49):DG(J-49) DG(I50):DC(J-50) DG(I51):DC(J-51) DC(I52):DG(J-52) DC(I53):DG(J-53) DT(I54):DA(J-54) DC(I55):DG(J-55) DG(I56):DC(J-56) DG(I57):DC(J-57) DC(I58):DG(J-58) DA(I59):DT(J-59) DC(I60):DG(J-60) DC(I61):DG(J-61) DG(I62):DC(J-62) DG(I63):DC(J-63) DG(I64):DC(J-64) DA(I65):DT(J-65) DT(I66):DA(J-66) DT(I67):DA(J-67) DC(I68):DG(J-68) DT(I69):DA(J-69) DC(I70):DG(J-70) DC(I71):DG(J-71) DA(I72):DT(J-72) DG(I73):DC(J-73) chainH ( 2) LYS27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) ARG30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 8 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence kKrkRkesyaiyiykvlkqvhpdtgisskamsimnsfvndiferiaaeasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytssk >8wak_6PQRTops: title=STRUCTURE OF TRANSCRIBING COMPLEX 2 (TC2), THE INITIALLY TRANSCRIBING COMPLEX WITH POL II POSITIONED 2NT DOWNSTREAM OF TSS. organism=? DNA sequence DA(X-40):DT(Y40) DA(X-39):DT(Y39) DG(X-38):DC(Y38) DG(X-37):DC(Y37) DG(X-36):DC(Y36) DC(X-35):DG(Y35) DG(X-34):DC(Y34) DC(X-33):DG(Y33) DC(X-32):DG(Y32) DT(X-31):DA(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DA(X-28):DT(Y28) DA(X-27):DT(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DG(X-24):DC(Y24) DG(X-23):DC(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DG(X-20):DC(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DG(X-17):DC(Y17) DT(X-16):DA(Y16) DT(X-15):DA(Y15) DG(X-14):DC(Y14) DT(X-13):DA(Y13) DG(X-12):DC(Y12) DA(X3):DT(Y11) DA(X4):DT(Y-4) DC(X5):DG(Y-5) DT(X6):DA(Y-6) DT(X7):DA(Y-7) DC(X8):DG(Y-8) DA(X9):DT(Y-9) DT(X10):DA(Y-10) DC(X11):DG(Y-11) DT(X12):DA(Y-12) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) chain6 chainP ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 7 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR ( 69) ASN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaino (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp chains prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyrsViEdvindvrdiflddgvdeqvlmelktlwEnklmgqveeeplnsEdDvsdeeGqElfdtenvvvcqydkihrsknkwkfhlkdgimnlnGrDyifskaigdaew/tcpnhpdailvedyragdmicpecglvvgdrvidvgsnpllsdgdlstmigkgtgaasfdefgnskyqNRRtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenetkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8wak_T:Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF TRANSCRIBING COMPLEX 2 (TC2), THE INITIALLY TRANSCRIBING COMPLEX WITH POL II POSITIONED 2NT DOWNSTREAM OF TSS. organism=? DNA sequence DA(X-40):DT(Y40) DA(X-39):DT(Y39) DG(X-38):DC(Y38) DG(X-37):DC(Y37) DG(X-36):DC(Y36) DC(X-35):DG(Y35) DG(X-34):DC(Y34) DC(X-33):DG(Y33) DC(X-32):DG(Y32) DT(X-31):DA(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DA(X-28):DT(Y28) DA(X-27):DT(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DG(X-24):DC(Y24) DG(X-23):DC(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DG(X-20):DC(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DG(X-17):DC(Y17) DT(X-16):DA(Y16) DT(X-15):DA(Y15) DG(X-14):DC(Y14) DT(X-13):DA(Y13) DG(X-12):DC(Y12) DA(X3):DT(Y11) DA(X4):DT(Y-4) DC(X5):DG(Y-5) DT(X6):DA(Y-6) DT(X7):DA(Y-7) DC(X8):DG(Y-8) DA(X9):DT(Y-9) DT(X10):DA(Y-10) DC(X11):DG(Y-11) DT(X12):DA(Y-12) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe >8wal_6PQRTops: title=STRUCTURE OF TRANSCRIBING COMPLEX 3 (TC3), THE INITIALLY TRANSCRIBING COMPLEX WITH POL II POSITIONED 3NT DOWNSTREAM OF TSS. organism=? DNA sequence DT(Y-37):DA(X37) DA(Y-36):DT(X36) DG(Y-35):DC(X35) DG(Y-34):DC(X34) DC(Y-33):DG(X33) DA(Y-32):DT(X32) DC(Y-31):DG(X31) DG(Y-30):DC(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DT(Y-27):DA(X27) DG(Y-26):DC(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DC(Y-23):DG(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DT(Y-19):DA(X19) DC(Y-18):DG(X18) DG(Y-17):DC(X17) DA(Y-16):DT(X16) DA(Y-15):DT(X15) DG(Y-14):DC(X14) DT(Y-13):DA(X13) DA(Y-12):DT(X12) DG(Y-11):DC(X11) DA(Y-10):DT(X10) DT(Y-9):DA(X9) DG(Y7):DC(X8) DA(Y8):DT(X7) DA(Y9):DT(X6) DC(Y10):DC(X5) DT(Y11):DA(X4) DC(Y12):DG(X-12) DA(Y13):DT(X-13) DC(Y14):DG(X-14) DA(Y15):DT(X-15) DA(Y16):DT(X-16) DC(Y17):DG(X-17) DC(Y18):DG(X-18) DA(Y19):DT(X-19) DC(Y20):DG(X-20) DC(Y21):DG(X-21) DC(Y22):DG(X-22) DC(Y23):DG(X-23) DC(Y24):DG(X-24) DT(Y25):DA(X-25) DT(Y26):DA(X-26) DT(Y27):DA(X-27) DT(Y28):DA(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DA(Y31):DT(X-31) DG(Y32):DC(X-32) DG(Y33):DC(X-33) DC(Y34):DG(X-34) DG(Y35):DC(X-35) DC(Y36):DG(X-36) DC(Y37):DG(X-37) DC(Y38):DG(X-38) DT(Y39):DA(X-39) DT(Y40):DA(X-40) chain6 chainP ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 7 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR ( 38) ASN72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 49) MET83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 69) ASN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 70) ARG104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaino (296) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (297) SER332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp (441) GLN456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (442) LYS457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chains prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFAavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyrsViEdvindvrdiflddgvdeqvlmelktlwENklmgqveeeplnsEdDvsdeeGqElfdtenvvvcqydkihrsknkwkfhlkdgimnlnGrDyifskaigdaew/tcpnhpdailvedyragdmicpecglvvgdrvidvgsNpllsdgdlstMigkgtgaasfdefgnskyqNRRtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKSgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitrhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdQKkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenetkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8wan_6PQRTops: title=STRUCTURE OF TRANSCRIBING COMPLEX 4 (TC4), THE INITIALLY TRANSCRIBING COMPLEX WITH POL II POSITIONED 4NT DOWNSTREAM OF TSS. organism=? DNA sequence DA(X-40):DT(Y40) DA(X-39):DT(Y39) DG(X-38):DC(Y38) DG(X-37):DC(Y37) DG(X-36):DC(Y36) DC(X-35):DG(Y35) DG(X-34):DC(Y34) DC(X-33):DG(Y33) DC(X-32):DG(Y32) DT(X-31):DA(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DA(X-28):DT(Y28) DA(X-27):DT(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DG(X-24):DC(Y24) DG(X-23):DC(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DG(X-20):DC(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DG(X-17):DC(Y17) DT(X-16):DA(Y16) DT(X-15):DA(Y15) DG(X-14):DC(Y14) DT(X-13):DA(Y13) DG(X-12):DC(Y12) DC(X5):DG(Y-5) DT(X6):DA(Y-6) DT(X7):DA(Y-7) DC(X8):DG(Y-8) DA(X9):DT(Y-9) DT(X10):DA(Y-10) DC(X11):DG(Y-11) DT(X12):DA(Y-12) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) chain6 chainP ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 7 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR ( 69) ASN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaino (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp chains prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyrsViEdvindvrdiflddgvdeqvlmelktlwEnklmgqveeeplnsEdDvsdeeGqElfdtenvvvcqydkihrsknkwkfhlkdgimnlnGrDyifskaigdaew/tcpnhpdailvedyragdmicpecglvvgdrvidvgsnpllsdgdlstmigkgtgaasfdefgnskyqNrRtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenetkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8wan_P:TATA-box_binding_protein-like; title=STRUCTURE OF TRANSCRIBING COMPLEX 4 (TC4), THE INITIALLY TRANSCRIBING COMPLEX WITH POL II POSITIONED 4NT DOWNSTREAM OF TSS. organism=? DNA sequence DG(Y-38):DC(X38) DT(Y-37):DA(X37) DA(Y-36):DT(X36) DG(Y-35):DC(X35) DG(Y-34):DC(X34) DC(Y-33):DG(X33) DA(Y-32):DT(X32) DC(Y-31):DG(X31) DG(Y-30):DC(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DT(Y-27):DA(X27) DG(Y-26):DC(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DC(Y-23):DG(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DT(Y-19):DA(X19) DC(Y-18):DG(X18) DG(Y-17):DC(X17) DA(Y-16):DT(X16) DA(Y-15):DT(X15) DG(Y-14):DC(X14) DT(Y-13):DA(X13) DA(Y-12):DT(X12) DG(Y-11):DC(X11) DA(Y-10):DT(X10) DT(Y-9):DA(X9) DA(Y2):DC(X8) DA(Y3):DT(X7) DG(Y4):DT(X6) DA(Y5):DC(X5) DC(Y12):DG(X-12) DA(Y13):DT(X-13) DC(Y14):DG(X-14) DA(Y15):DT(X-15) DA(Y16):DT(X-16) DC(Y17):DG(X-17) DC(Y18):DG(X-18) DA(Y19):DT(X-19) DC(Y20):DG(X-20) DC(Y21):DG(X-21) DC(Y22):DG(X-22) DC(Y23):DG(X-23) DC(Y24):DG(X-24) DT(Y25):DA(X-25) DT(Y26):DA(X-26) DT(Y27):DA(X-27) DT(Y28):DA(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DA(Y31):DT(X-31) DG(Y32):DC(X-32) DG(Y33):DC(X-33) DC(Y34):DG(X-34) DG(Y35):DC(X-35) DC(Y36):DG(X-36) DC(Y37):DG(X-37) DC(Y38):DG(X-38) DT(Y39):DA(X-39) DT(Y40):DA(X-40) chainP ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 7 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 7 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk >8wao_6PQRTops: title=STRUCTURE OF TRANSCRIBING COMPLEX 5 (TC5), THE INITIALLY TRANSCRIBING COMPLEX WITH POL II POSITIONED 5NT DOWNSTREAM OF TSS. organism=? DNA sequence DA(X-40):DT(Y40) DA(X-39):DT(Y39) DG(X-38):DC(Y38) DG(X-37):DC(Y37) DG(X-36):DC(Y36) DC(X-35):DG(Y35) DG(X-34):DC(Y34) DC(X-33):DG(Y33) DC(X-32):DG(Y32) DT(X-31):DA(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DA(X-28):DT(Y28) DA(X-27):DT(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DG(X-24):DC(Y24) DG(X-23):DC(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DG(X-20):DC(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DG(X-17):DC(Y17) DT(X-16):DA(Y16) DT(X-15):DA(Y15) DG(X-14):DC(Y14) DT(X-13):DA(Y13) DG(X-12):DC(Y-5) DT(X6):DA(Y-6) DT(X7):DA(Y-7) DC(X8):DG(Y-8) DA(X9):DT(Y-9) DT(X10):DA(Y-10) DC(X11):DG(Y-11) DT(X12):DA(Y-12) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) chain6 chainP ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 8 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 7 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR ( 71) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaino (819) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp chains prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyrsViEdvindvrdiflddgvdeqvlmelktlwEnklmgqveeeplnsEdDvsdeeGqElfdtenvvvcqydkihrsknkwkfhlkdgimnlnGrDyifskaigdaew/tcpnhpdailvedyragdmicpecglvvgdrvidvgsnpllsdgdlstmigkgtgaasfdefgnskyqnrRtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptREtcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenetkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8wap_6PQRTops: title=STRUCTURE OF TRANSCRIBING COMPLEX 6 (TC6), THE INITIALLY TRANSCRIBING COMPLEX WITH POL II POSITIONED 6NT DOWNSTREAM OF TSS. organism=? DNA sequence DA(X-40):DT(Y40) DA(X-39):DT(Y39) DG(X-38):DC(Y38) DG(X-37):DC(Y37) DG(X-36):DC(Y36) DC(X-35):DG(Y35) DG(X-34):DC(Y34) DC(X-33):DG(Y33) DC(X-32):DG(Y32) DT(X-31):DA(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DA(X-28):DT(Y28) DA(X-27):DT(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DG(X-24):DC(Y24) DG(X-23):DC(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DG(X-20):DC(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DG(X-17):DC(Y17) DT(X-16):DA(Y16) DT(X-15):DA(Y15) DG(X-14):DC(Y14) DT(X-13):DA(Y13) DG(X-12):DC(Y12) DT(X7):DA(Y-7) DC(X8):DG(Y-8) DA(X9):DT(Y-9) DT(X10):DA(Y-10) DC(X11):DG(Y-11) DT(X12):DA(Y-12) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) DG(X40):DC(Y-40) chain6 chainP ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 8 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR ( 69) ASN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaino (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp chains prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyrsViEdvindvrdiflddgvdeqvlmelktlwEnklmgqveeeplnsEdDvsdeeGqElfdtenvvvcqydkihrsknkwkfhlkdgimnlnGrDyifskaigdaew/tcpnhpdailvedyragdmicpecglvvgdrvidvgsnpllsdgdlstmigkgtgaasfdefgnskyqNrRtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenetkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8wap_T:Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF TRANSCRIBING COMPLEX 6 (TC6), THE INITIALLY TRANSCRIBING COMPLEX WITH POL II POSITIONED 6NT DOWNSTREAM OF TSS. organism=? DNA sequence DA(X-40):DT(Y40) DA(X-39):DT(Y39) DG(X-38):DC(Y38) DG(X-37):DC(Y37) DG(X-36):DC(Y36) DC(X-35):DG(Y35) DG(X-34):DC(Y34) DC(X-33):DG(Y33) DC(X-32):DG(Y32) DT(X-31):DA(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DA(X-28):DT(Y28) DA(X-27):DT(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DG(X-24):DC(Y24) DG(X-23):DC(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DG(X-20):DC(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DG(X-17):DC(Y17) DT(X-16):DA(Y16) DT(X-15):DA(Y15) DG(X-14):DC(Y14) DT(X-13):DA(Y13) DG(X-12):DC(Y12) DT(X7):DA(Y-7) DC(X8):DG(Y-8) DA(X9):DT(Y-9) DT(X10):DA(Y-10) DC(X11):DG(Y-11) DT(X12):DA(Y-12) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) DG(X40):DC(Y-40) chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe >8waq_6PQRTops: title=STRUCTURE OF TRANSCRIBING COMPLEX 7 (TC7), THE INITIALLY TRANSCRIBING COMPLEX WITH POL II POSITIONED 7NT DOWNSTREAM OF TSS. organism=? DNA sequence DA(X-40):DT(Y40) DA(X-39):DT(Y39) DG(X-38):DC(Y38) DG(X-37):DC(Y37) DG(X-36):DC(Y36) DC(X-35):DG(Y35) DG(X-34):DC(Y34) DC(X-33):DG(Y33) DC(X-32):DG(Y32) DT(X-31):DA(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DA(X-28):DT(Y28) DA(X-27):DT(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DG(X-24):DC(Y24) DG(X-23):DC(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DG(X-20):DC(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DG(X-17):DC(Y17) DT(X-16):DA(Y16) DT(X-15):DA(Y15) DG(X-14):DC(Y14) DT(X-13):DA(Y13) DG(X-12):DC(Y12) DC(X8):DG(Y-8) DA(X9):DT(Y-9) DT(X10):DA(Y-10) DC(X11):DG(Y-11) DT(X12):DA(Y-12) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) DG(X40):DC(Y-40) DA(X41):DT(Y-41) chain6 chainP ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 40) ALA198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 7 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR ( 69) ASN103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 71) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaino (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp chains prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFAavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyrsViEdvindvrdiflddgvdeqvlmelktlwENklmgqveeeplnsEdDvsdeeGqElfdtenvvvcqydkihrsknkwkfhlkdgimnlnGrDyifskaigdaew/tcpnhpdailvedyragdmicpecglvvgdrvidvgsnpllsdgdlstmigkgtgaasfdefgnskyqNrRtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenetkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8waq_T:Rap30/74_interaction_domains;"Winged_helix"_DNA-binding_domain; title=STRUCTURE OF TRANSCRIBING COMPLEX 7 (TC7), THE INITIALLY TRANSCRIBING COMPLEX WITH POL II POSITIONED 7NT DOWNSTREAM OF TSS. organism=? DNA sequence DT(Y-41):DA(X41) DC(Y-40):DG(X40) DC(Y-39):DG(X39) DG(Y-38):DC(X38) DT(Y-37):DA(X37) DA(Y-36):DT(X36) DG(Y-35):DC(X35) DG(Y-34):DC(X34) DC(Y-33):DG(X33) DA(Y-32):DT(X32) DC(Y-31):DG(X31) DG(Y-30):DC(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DT(Y-27):DA(X27) DG(Y-26):DC(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DC(Y-23):DG(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DT(Y-19):DA(X19) DC(Y-18):DG(X18) DG(Y-17):DC(X17) DA(Y-16):DT(X16) DA(Y-15):DT(X15) DG(Y-14):DC(X14) DT(Y-13):DA(X13) DA(Y-12):DT(X12) DG(Y-11):DC(X11) DT(Y0):DT(X10) DG(Y1):DA(X9) DA(Y2):DC(X8) DC(Y12):DG(X-12) DA(Y13):DT(X-13) DC(Y14):DG(X-14) DA(Y15):DT(X-15) DA(Y16):DT(X-16) DC(Y17):DG(X-17) DC(Y18):DG(X-18) DA(Y19):DT(X-19) DC(Y20):DG(X-20) DC(Y21):DG(X-21) DC(Y22):DG(X-22) DC(Y23):DG(X-23) DC(Y24):DG(X-24) DT(Y25):DA(X-25) DT(Y26):DA(X-26) DT(Y27):DA(X-27) DT(Y28):DA(X-28) DA(Y29):DT(X-29) DT(Y30):DA(X-30) DA(Y31):DT(X-31) DG(Y32):DC(X-32) DG(Y33):DC(X-33) DC(Y34):DG(X-34) DG(Y35):DC(X-35) DC(Y36):DG(X-36) DC(Y37):DG(X-37) DC(Y38):DG(X-38) DT(Y39):DA(X-39) DT(Y40):DA(X-40) chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe >8war_6PQRTops: title=STRUCTURE OF TRANSCRIBING COMPLEX 8 (TC8), THE INITIALLY TRANSCRIBING COMPLEX WITH POL II POSITIONED 8NT DOWNSTREAM OF TSS. organism=? DNA sequence DA(X-40):DT(Y40) DA(X-39):DT(Y39) DG(X-38):DC(Y38) DG(X-37):DC(Y37) DG(X-36):DC(Y36) DC(X-35):DG(Y35) DG(X-34):DC(Y34) DC(X-33):DG(Y33) DC(X-32):DG(Y32) DT(X-31):DA(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DA(X-28):DT(Y28) DA(X-27):DT(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DG(X-24):DC(Y24) DG(X-23):DC(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DG(X-20):DC(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DG(X-17):DC(Y17) DT(X-16):DA(Y16) DT(X-15):DA(Y15) DG(X-14):DC(Y14) DT(X-13):DA(Y13) DG(X-12):DC(Y-8) DA(X9):DT(Y-9) DT(X10):DA(Y-10) DC(X11):DG(Y-11) DT(X12):DA(Y-12) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) DG(X40):DC(Y-40) DA(X41):DT(Y-41) DC(X42):DG(Y-42) chain6 chainP ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 7 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR ( 71) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaino (819) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp chains prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyrsViEdvindvrdiflddgvdeqvlmelktlwEnklmgqveeeplnsEdDvsdeeGqElfdtenvvvcqydkihrsknkwkfhlkdgimnlnGrDyifskaigdaew/tcpnhpdailvedyragdmicpecglvvgdrvidvgsnpllsdgdlstmigkgtgaasfdefgnskyqnrRtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptREtcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenetkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8war_R:Cyclin-like;Zinc_beta-ribbon; title=STRUCTURE OF TRANSCRIBING COMPLEX 8 (TC8), THE INITIALLY TRANSCRIBING COMPLEX WITH POL II POSITIONED 8NT DOWNSTREAM OF TSS. organism=? DNA sequence DA(X-40):DT(Y40) DA(X-39):DT(Y39) DG(X-38):DC(Y38) DG(X-37):DC(Y37) DG(X-36):DC(Y36) DC(X-35):DG(Y35) DG(X-34):DC(Y34) DC(X-33):DG(Y33) DC(X-32):DG(Y32) DT(X-31):DA(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DA(X-28):DT(Y28) DA(X-27):DT(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DG(X-24):DC(Y24) DG(X-23):DC(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DG(X-20):DC(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DG(X-17):DC(Y17) DT(X-16):DA(Y16) DT(X-15):DA(Y15) DG(X-14):DC(Y14) DT(X-13):DA(Y13) DG(X-12):DC(Y-8) DA(X9):DT(Y-9) DT(X10):DA(Y-10) DC(X11):DG(Y-11) DT(X12):DA(Y-12) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) DG(X40):DC(Y-40) DA(X41):DT(Y-41) DC(X42):DG(Y-42) chainR ( 71) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence tcpnhpdailvedyragdmicpecglvvgdrvidvgsnpllsdgdlstmigkgtgaasfdefgnskyqnrRtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql >8was_6PQRTops: title=STRUCTURE OF TRANSCRIBING COMPLEX 9 (TC9), THE INITIALLY TRANSCRIBING COMPLEX WITH POL II POSITIONED 9NT DOWNSTREAM OF TSS. organism=? DNA sequence DA(X-40):DT(Y40) DA(X-39):DT(Y39) DG(X-38):DC(Y38) DG(X-37):DC(Y37) DG(X-36):DC(Y36) DC(X-35):DG(Y35) DG(X-34):DC(Y34) DC(X-33):DG(Y33) DC(X-32):DG(Y32) DT(X-31):DA(Y31) DA(X-30):DT(Y30) DT(X-29):DA(Y29) DA(X-28):DT(Y28) DA(X-27):DT(Y27) DA(X-26):DT(Y26) DA(X-25):DT(Y25) DG(X-24):DC(Y24) DG(X-23):DC(Y23) DG(X-22):DC(Y22) DG(X-21):DC(Y21) DG(X-20):DC(Y20) DT(X-19):DA(Y19) DG(X-18):DC(Y18) DG(X-17):DC(Y17) DT(X-16):DA(Y16) DT(X-15):DA(Y15) DG(X-14):DC(Y14) DT(X-13):DA(Y13) DG(X-12):DC(Y-9) DT(X10):DA(Y-10) DC(X11):DG(Y-11) DT(X12):DA(Y-12) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) DG(X40):DC(Y-40) DA(X41):DT(Y-41) DC(X42):DG(Y-42) DC(X43):DG(Y-43) chain6 chainP ( 9) ASN167 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 11) VAL169 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 39) PHE197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 54) LEU212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 56) PHE214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 62) VAL220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 64) THR222 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 99) ASN257 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (101) VAL259 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (130) PHE288 0 0 0 0 0 0 0 0 0 8 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (131) PRO289 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (145) LEU303 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (147) PHE305 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (153) VAL311 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (155) THR313 0 0 0 0 0 0 0 0 0 0 0 1 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainQ chainR ( 71) ARG105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainT (158) LYS174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chaino (819) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp chains prot.sequence tkvdeygakdyrlqmplkddhtsrplwvapdghifleafspvykyaqdflvaiaepvcrpthvheykltayslyaavsvglqtsditeylrklsktgvpdgimqfiklctvsygkvklvlkhnryfveschpdviqhllqdpvirecrlrqtvsfevkqemieelqkrcihleypllaeydfrndsvnpdinidlkptavlrpyqekslrkmfgngrarsgvivlpcgagkslvgvtaactvrkrclvlgnsavsveqwkaqfkmwstiddsqicrftsdakdkpigcsvaistysmlghttkrsweaervmewlktqewglmildevhtipakmfrrvltivqahcklgltatlvreddkivdlnfligpklyeanwmelqnngyiakvqcaevwcpmspefyreyvaiktkkrillytmnpnkfracqflikfherrndkiivfadnvfalkeyairlnkpyiygptsqgermqilqnfkhnpkintifiskvgdtsfdlpeanvliqisshggsrrqeaqrlgrvlrakkgmvaeeynaffyslvsqdtqemaystkrqrflvdqgysfkvitklagmeeedlafstkeeqqqllqkvlaat/sgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrk/tvpklyrsViEdvindvrdiflddgvdeqvlmelktlwEnklmgqveeeplnsEdDvsdeeGqElfdtenvvvcqydkihrsknkwkfhlkdgimnlnGrDyifskaigdaew/tcpnhpdailvedyragdmicpecglvvgdrvidvgsnpllsdgdlstmigkgtgaasfdefgnskyqnrRtmsssdrammnafkeittmadrinlprnivdrtnnlfkqvyeqkslkgrandaiasaclyiacrqegvprtfkeicavsriskkeigrcfklilkaletsvdlittgdfmsrfcsnlclpkqvqmaathiarkaveldlvpgrspisvaaaaiymasqasaekrtqkeigdiagvadvtirqsyrliyprapdlfptdfkfdtpvdklpql/aergeldltgakqntgvwlvkvpkylsqqwakasgrgevgklriaktqgrtevsftlnedlanehpfvlqsvggqtltvftesssdklslegivvqraecrpaasenymrlkrlqieesskpvrlsqqldkvvttnykpvanhqynieyerkkkedgKraradkqhvldmlfsafekhqyynlkdlvditkqpvvylkeilkeigvqnvkgihkntwelkpe/sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvmqgsarnqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqksgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptREtcqgmrhaiydkldddgliapgvrvsgddviigktvtlpenetkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8wat_o:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=DE NOVO TRANSCRIBING COMPLEX 10 (TC10), THE EARLY ELONGATION COMPLEX WITH POL II POSITIONED 10NT DOWNSTREAM OF TSS organism=? DNA sequence DG(X-14):DA(Y3) DT(X-13):DA(Y2) DG(X-12):DG(Y1) DA(X-11):DT(Y0) DG(X-10):DA(Y-1) DT(X-9):DG(Y-2) DT(X-8):DT(Y-3) DC(X-7):DT(Y-4) DT(X-6):DG(Y-5) DT(X-5):DA(Y-6) DC(X-4):DA(Y-7) DT(X-3):DG(Y-8) DT(X-2):DC(Y-9) DC(X-1):DC(Y-10) DC(X11):DG(Y-11) DT(X12):DA(Y-12) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) chaino (231) MET266 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ASN272 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) LYS331 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) ARG364 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (427) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (819) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1382) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip >8wat_ops: title=DE NOVO TRANSCRIBING COMPLEX 10 (TC10), THE EARLY ELONGATION COMPLEX WITH POL II POSITIONED 10NT DOWNSTREAM OF TSS organism=? DNA sequence DG(X-14):DA(Y3) DT(X-13):DA(Y2) DG(X-12):DG(Y1) DA(X-11):DT(Y0) DG(X-10):DA(Y-1) DT(X-9):DG(Y-2) DT(X-8):DT(Y-3) DC(X-7):DT(Y-4) DT(X-6):DG(Y-5) DT(X-5):DA(Y-6) DC(X-4):DA(Y-7) DT(X-3):DG(Y-8) DT(X-2):DC(Y-9) DC(X-1):DC(Y-10) DC(X11):DG(Y-11) DT(X12):DA(Y-12) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) chaino (231) MET266 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ASN272 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) LYS331 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) ARG364 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (427) PRO462 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (819) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1382) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp (503) HIS518 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chains prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQPtlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpegHavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8wau_o:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=DE NOVO TRANSCRIBING COMPLEX 11 (TC11), THE EARLY ELONGATION COMPLEX WITH POL II POSITIONED 11NT DOWNSTREAM OF TSS organism=? DNA sequence DC(Y-40):DG(X40) DC(Y-39):DG(X39) DG(Y-38):DC(X38) DT(Y-37):DA(X37) DA(Y-36):DT(X36) DG(Y-35):DC(X35) DG(Y-34):DC(X34) DC(Y-33):DG(X33) DA(Y-32):DT(X32) DC(Y-31):DG(X31) DG(Y-30):DC(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DT(Y-27):DA(X27) DG(Y-26):DC(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DC(Y-23):DG(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DT(Y-19):DA(X19) DC(Y-18):DG(X18) DG(Y-17):DC(X17) DA(Y-16):DT(X16) DA(Y-15):DT(X15) DG(Y-14):DC(X14) DT(Y-13):DA(X13) DA(Y-12):DT(X12) DC(Y-11):DA(X0) DC(Y-10):DC(X-1) DT(Y-9):DT(X-2) DG(Y-8):DT(X-3) DA(Y-7):DC(X-4) DA(Y-6):DT(X-5) DG(Y-5):DT(X-6) DT(Y-4):DC(X-7) DT(Y-3):DT(X-8) DG(Y-2):DT(X-9) DA(Y-1):DG(X-10) DT(Y0):DA(X-11) DG(Y1):DG(X-12) DA(Y2):DT(X-13) chaino (231) MET266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 (237) ASN272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (296) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 (329) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (426) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (819) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1382) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip >8wau_ops: title=DE NOVO TRANSCRIBING COMPLEX 11 (TC11), THE EARLY ELONGATION COMPLEX WITH POL II POSITIONED 11NT DOWNSTREAM OF TSS organism=? DNA sequence DC(Y-40):DG(X40) DC(Y-39):DG(X39) DG(Y-38):DC(X38) DT(Y-37):DA(X37) DA(Y-36):DT(X36) DG(Y-35):DC(X35) DG(Y-34):DC(X34) DC(Y-33):DG(X33) DA(Y-32):DT(X32) DC(Y-31):DG(X31) DG(Y-30):DC(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DT(Y-27):DA(X27) DG(Y-26):DC(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DC(Y-23):DG(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DT(Y-19):DA(X19) DC(Y-18):DG(X18) DG(Y-17):DC(X17) DA(Y-16):DT(X16) DA(Y-15):DT(X15) DG(Y-14):DC(X14) DT(Y-13):DA(X13) DA(Y-12):DT(X12) DC(Y-11):DA(X0) DC(Y-10):DC(X-1) DT(Y-9):DT(X-2) DG(Y-8):DT(X-3) DA(Y-7):DC(X-4) DA(Y-6):DT(X-5) DG(Y-5):DT(X-6) DT(Y-4):DC(X-7) DT(Y-3):DT(X-8) DG(Y-2):DT(X-9) DA(Y-1):DG(X-10) DT(Y0):DA(X-11) DG(Y1):DG(X-12) DA(Y2):DT(X-13) chaino (231) MET266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 (237) ASN272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 (296) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 (329) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (426) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 (819) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1382) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp (503) HIS518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chains prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpegHavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8wav_o:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=DE NOVO TRANSCRIBING COMPLEX 12 (TC12), THE EARLY ELONGATION COMPLEX WITH POL II POSITIONED 12NT DOWNSTREAM OF TSS organism=? DNA sequence DG(X-12):DA(Y3) DA(X-11):DA(Y2) DG(X-10):DG(Y1) DT(X-9):DT(Y0) DT(X-8):DA(Y-1) DC(X-7):DG(Y-2) DT(X-6):DT(Y-3) DT(X-5):DT(Y-4) DC(X-4):DG(Y-5) DT(X-3):DA(Y-6) DT(X-2):DA(Y-7) DC(X-1):DG(Y-8) DA(X0):DT(Y-9) DT(X1):DA(Y-10) DA(X13):DT(Y-13) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) DG(X40):DC(Y-40) DA(X41):DT(Y-41) chaino (231) MET266 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ASN272 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) LYS331 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip >8wav_ops: title=DE NOVO TRANSCRIBING COMPLEX 12 (TC12), THE EARLY ELONGATION COMPLEX WITH POL II POSITIONED 12NT DOWNSTREAM OF TSS organism=? DNA sequence DT(Y-41):DA(X41) DC(Y-40):DG(X40) DC(Y-39):DG(X39) DG(Y-38):DC(X38) DT(Y-37):DA(X37) DA(Y-36):DT(X36) DG(Y-35):DC(X35) DG(Y-34):DC(X34) DC(Y-33):DG(X33) DA(Y-32):DT(X32) DC(Y-31):DG(X31) DG(Y-30):DC(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DT(Y-27):DA(X27) DG(Y-26):DC(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DC(Y-23):DG(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DT(Y-19):DA(X19) DC(Y-18):DG(X18) DG(Y-17):DC(X17) DA(Y-16):DT(X16) DA(Y-15):DT(X15) DG(Y-14):DC(X14) DT(Y-13):DA(X13) DC(Y-12):DT(X1) DC(Y-11):DA(X0) DA(Y-10):DC(X-1) DT(Y-9):DT(X-2) DG(Y-8):DT(X-3) DA(Y-7):DC(X-4) DA(Y-6):DT(X-5) DG(Y-5):DT(X-6) DT(Y-4):DC(X-7) DT(Y-3):DT(X-8) DG(Y-2):DT(X-9) DA(Y-1):DG(X-10) DT(Y0):DA(X-11) DG(Y1):DG(X-12) chaino (231) MET266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 (237) ASN272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 (296) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 (329) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 (426) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 (819) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp (503) HIS518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 chains prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpegHavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8waw_ops: title=DE NOVO TRANSCRIBING COMPLEX 13 (TC13), THE EARLY ELONGATION COMPLEX WITH POL II POSITIONED 13NT DOWNSTREAM OF TSS organism=? DNA sequence DA(X-11):DA(Y2) DG(X-10):DG(Y1) DT(X-9):DT(Y0) DT(X-8):DA(Y-1) DC(X-7):DG(Y-2) DT(X-6):DT(Y-3) DT(X-5):DT(Y-4) DC(X-4):DG(Y-5) DT(X-3):DA(Y-6) DT(X-2):DA(Y-7) DC(X-1):DG(Y-8) DA(X0):DT(Y-9) DT(X1):DA(Y-10) DC(X2):DG(Y-11) DC(X14):DG(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) DG(X40):DC(Y-40) DA(X41):DT(Y-41) DC(X42):DG(Y-42) chaino (231) MET266 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ASN272 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) LYS331 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp chains prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRhgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqGakksaIgqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafvIqeqnvalnfigsrgakpgvtkekrikyakevlQkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8wax_ops: title=DE NOVO TRANSCRIBING COMPLEX 14 (TC14), THE EARLY ELONGATION COMPLEX WITH POL II POSITIONED 14NT DOWNSTREAM OF TSS organism=? DNA sequence DG(X-10):DG(Y1) DT(X-9):DT(Y0) DT(X-8):DA(Y-1) DC(X-7):DG(Y-2) DT(X-6):DT(Y-3) DT(X-5):DT(Y-4) DC(X-4):DG(Y-5) DT(X-3):DA(Y-6) DT(X-2):DA(Y-7) DC(X-1):DG(Y-8) DA(X0):DT(Y-9) DT(X1):DA(Y-10) DC(X2):DG(Y-11) DA(X3):DC(Y-14) DT(X15):DA(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) DG(X40):DC(Y-40) DA(X41):DT(Y-41) DC(X42):DG(Y-42) DC(X43):DG(Y-43) chaino (231) MET266 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ASN272 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) LYS331 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (819) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1382) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp (503) HIS518 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chains prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqgakksaigqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafviqeqnvalnfigsrgakpgvtkekrikyakevlqkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpegHavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8way_o:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=DE NOVO TRANSCRIBING COMPLEX 15 (TC15), THE EARLY ELONGATION COMPLEX WITH POL II POSITIONED 15NT DOWNSTREAM OF TSS organism=? DNA sequence DT(X-9):DT(Y0) DT(X-8):DA(Y-1) DC(X-7):DG(Y-2) DT(X-6):DT(Y-3) DT(X-5):DT(Y-4) DC(X-4):DG(Y-5) DT(X-3):DA(Y-6) DT(X-2):DA(Y-7) DC(X-1):DG(Y-8) DA(X0):DT(Y-9) DT(X1):DA(Y-10) DC(X2):DG(Y-11) DA(X3):DC(Y-14) DA(X4):DC(Y-15) DT(X16):DA(Y-16) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) DG(X40):DC(Y-40) DA(X41):DT(Y-41) DC(X42):DG(Y-42) DC(X43):DG(Y-43) DA(X44):DT(Y-44) chaino (231) MET266 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ASN272 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) LYS331 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (819) THR854 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (820) ALA855 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1382) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsartvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavkTAetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip >8way_ops: title=DE NOVO TRANSCRIBING COMPLEX 15 (TC15), THE EARLY ELONGATION COMPLEX WITH POL II POSITIONED 15NT DOWNSTREAM OF TSS organism=? DNA sequence DT(Y-44):DA(X44) DG(Y-43):DC(X43) DG(Y-42):DC(X42) DT(Y-41):DA(X41) DC(Y-40):DG(X40) DC(Y-39):DG(X39) DG(Y-38):DC(X38) DT(Y-37):DA(X37) DA(Y-36):DT(X36) DG(Y-35):DC(X35) DG(Y-34):DC(X34) DC(Y-33):DG(X33) DA(Y-32):DT(X32) DC(Y-31):DG(X31) DG(Y-30):DC(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DT(Y-27):DA(X27) DG(Y-26):DC(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DC(Y-23):DG(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DT(Y-19):DA(X19) DC(Y-18):DG(X18) DG(Y-17):DC(X17) DA(Y-16):DT(X16) DT(Y-13):DA(X4) DA(Y-12):DA(X3) DG(Y-11):DC(X2) DA(Y-10):DT(X1) DT(Y-9):DA(X0) DG(Y-8):DC(X-1) DA(Y-7):DT(X-2) DA(Y-6):DT(X-3) DG(Y-5):DC(X-4) DT(Y-4):DT(X-5) DT(Y-3):DT(X-6) DG(Y-2):DC(X-7) DA(Y-1):DT(X-8) DT(Y0):DT(X-9) chaino (231) MET266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 (237) ASN272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 (296) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 (329) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1382) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp chains prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqGakksaIgqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafvIqeqnvalnfigsrgakpgvtkekrikyakevlQkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8waz_ops: title=DE NOVO TRANSCRIBING COMPLEX 16 (TC16), THE EARLY ELONGATION COMPLEX WITH POL II POSITIONED 16NT DOWNSTREAM OF TSS organism=? DNA sequence DT(X-8):DA(Y-1) DC(X-7):DG(Y-2) DT(X-6):DT(Y-3) DT(X-5):DT(Y-4) DC(X-4):DG(Y-5) DT(X-3):DA(Y-6) DT(X-2):DA(Y-7) DC(X-1):DG(Y-8) DA(X0):DT(Y-9) DT(X1):DA(Y-10) DC(X2):DG(Y-11) DA(X3):DA(Y-12) DA(X4):DT(Y-13) DC(X5):DG(Y-14) DC(X17):DG(Y-17) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) DG(X40):DC(Y-40) DA(X41):DT(Y-41) DC(X42):DG(Y-42) DC(X43):DG(Y-43) DA(X44):DT(Y-44) DT(X45):DA(Y-45) chaino (231) MET266 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ASN272 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) LYS331 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1382) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp chains prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivkinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqGakksaIgqrivatlpyikqevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafvIqeqnvalnfigsrgakpgvtkekrikyakevlQkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8wb0_o:beta_and_beta-prime_subunits_of_DNA_dependent_RNA-polymerase; title=DE NOVO TRANSCRIBING COMPLEX 17 (TC17), THE EARLY ELONGATION COMPLEX WITH POL II POSITIONED 17NT DOWNSTREAM OF TSS organism=? DNA sequence DC(Y-46):DG(X46) DA(Y-45):DT(X45) DT(Y-44):DA(X44) DG(Y-43):DC(X43) DG(Y-42):DC(X42) DT(Y-41):DA(X41) DC(Y-40):DG(X40) DC(Y-39):DG(X39) DG(Y-38):DC(X38) DT(Y-37):DA(X37) DA(Y-36):DT(X36) DG(Y-35):DC(X35) DG(Y-34):DC(X34) DC(Y-33):DG(X33) DA(Y-32):DT(X32) DC(Y-31):DG(X31) DG(Y-30):DC(X30) DT(Y-29):DA(X29) DC(Y-28):DG(X28) DT(Y-27):DA(X27) DG(Y-26):DC(X26) DC(Y-25):DG(X25) DT(Y-24):DA(X24) DC(Y-23):DG(X23) DG(Y-22):DC(X22) DG(Y-21):DC(X21) DC(Y-20):DG(X20) DT(Y-19):DA(X19) DC(Y-16):DG(X18) DA(Y-15):DT(X6) DG(Y-14):DC(X5) DT(Y-13):DA(X4) DA(Y-12):DA(X3) DG(Y-11):DC(X2) DA(Y-10):DT(X1) DT(Y-9):DA(X0) DG(Y-8):DC(X-1) DA(Y-7):DT(X-2) DA(Y-6):DT(X-3) DG(Y-5):DC(X-4) DT(Y-4):DT(X-5) DT(Y-3):DT(X-6) DG(Y-2):DC(X-7) chaino (231) MET266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 (237) ASN272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 (250) LYS285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) LYS331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 (329) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 (426) GLN461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1382) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivKinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrQptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip >8wb0_ops: title=DE NOVO TRANSCRIBING COMPLEX 17 (TC17), THE EARLY ELONGATION COMPLEX WITH POL II POSITIONED 17NT DOWNSTREAM OF TSS organism=? DNA sequence DC(X-7):DG(Y-2) DT(X-6):DT(Y-3) DT(X-5):DT(Y-4) DC(X-4):DG(Y-5) DT(X-3):DA(Y-6) DT(X-2):DA(Y-7) DC(X-1):DG(Y-8) DA(X0):DT(Y-9) DT(X1):DA(Y-10) DC(X2):DG(Y-11) DA(X3):DA(Y-12) DA(X4):DT(Y-13) DC(X5):DG(Y-14) DT(X6):DA(Y-15) DG(X18):DC(Y-18) DA(X19):DT(Y-19) DG(X20):DC(Y-20) DC(X21):DG(Y-21) DC(X22):DG(Y-22) DG(X23):DC(Y-23) DA(X24):DT(Y-24) DG(X25):DC(Y-25) DC(X26):DG(Y-26) DA(X27):DT(Y-27) DG(X28):DC(Y-28) DA(X29):DT(Y-29) DC(X30):DG(Y-30) DG(X31):DC(Y-31) DT(X32):DA(Y-32) DG(X33):DC(Y-33) DC(X34):DG(Y-34) DC(X35):DG(Y-35) DT(X36):DA(Y-36) DA(X37):DT(Y-37) DC(X38):DG(Y-38) DG(X39):DC(Y-39) DG(X40):DC(Y-40) DA(X41):DT(Y-41) DC(X42):DG(Y-42) DC(X43):DG(Y-43) DA(X44):DT(Y-44) DT(X45):DA(Y-45) DG(X46):DC(Y-46) chaino (231) MET266 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (237) ASN272 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (250) LYS285 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (296) LYS331 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (329) ARG364 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1381) ARG1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (1382) HIS1417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainp chains prot.sequence sacplrtikrvqfgvlspdelkrmsvteggikypetteggrpklgglmdprqgviertgrcqtcagnmtecpghfghielakpvfhvgflvktmkvlrcvcffcskllvdsnnpkikdilakskgqpkkrlthvydlckgknicehggcgryqprirrsglelyaewkhvnedsqekkillspervheifkrisdeecfvlgmepryarpewmivtvlpvpplsvrpavvMqgsarNqddlthkladivKinnqlrrneqngaaahviaedvkllqfhvatmvdnelpglpramqKsgrplkslkqrlkgkegrvrgnlmgkrvdfsaRtvitpdpnlsidqvgvprsiaanmtfaeivtpfnidrlqelvrrgnsqypgakyiirdngdridlrfhpkpsdlhlqtgykverhmcdgdivifnrqptlhkmsmmghrvrilpwstfrlnlsvttpynadfdgdemnlhlpqsletraeiqelamvprmivtpqsnrpvmgivqdtltavrkftkrdvflergevmnllmflstwdgkvpqpailkprplwtgkqifsliipghincirthsthpddedsgpykhispgdtkvvvengelimgilckkslgtsagslvhisylemghditrlfysniqtvinnwllieghtigigdsiadsktyqdiqntikkakqdvieviekahnneleptpgntlrqtfenqvnrilndardktgssaqkslseynnfksmvvsgakgskinisqviavvgqqnvegkripfgfkhrtlphfikddygpesrgfvensylagltptefffhamggreglidtavktaetgyiqrrliksmesvmvkydatvrnsinqvvqlrygedglagesvefqnlatlkpsnkafekkfrfdytneralrrtlqedlvkdvlsnahiqnelerefermredrevlrvifptgdskvvlpcnllrmiwnaqkifhinprlpsdlhpikvvegvkelskklvivngddplsrqaqenatllfnihlrstlcsrrmaeefrlsgeafdwllgeieskfnqaiahpgemvgalaaqslgepatqmtlntfhyagvsaknvtlgvprlkeliniskkpktpsltvfllgqsardaerakdilcrlehttlrkvtantaiyydpnpqstvvaedqewvnvyyempdfdvarispwllrveldrkhmtdrkltmeqiaekinagfgddlncifnddnaeklvlririmnsdenkmqeeeevvdkmdddvflrciesnmltdmtlqgieqiskvymhlpqtdnkkkiiitedgefkalqewiletdgvslmrvlsekdvdpvrttsndiveiftvlgieavrkalerelyhvisfdgsyvnyrhlallcdtmtcrghlmaitRHgvnrqdtgplmkcsfeetvdvlmeaaahgesdpmkgvsenimlgqlapagtgcfdllldaekckygmeip/eitpdlwqeacwivissyfdekglvrqqldsfdefiqmsvqrivedappidlqaeaqhasgeveeppryllkfeqiylskpthwerdgapspmmpnearlrnltysaplyvditktvikegeeqlqtqhqktfigkipimlrstycllngltdrdlcelnecpldpggyfiingsekvliaqekmatntvyvfakkdskyaytgecrsclenssrptstiwvsmlarggqGakksaIgqrivatlpyikQevpiiivfralgfvsdrdilehiiydfedpemmemvkpsldeafvIqeqnvalnfigsrgakpgvtkekrikyakevlQkemlphvgvsdfcetkkayflgymvhrlllaalgrrelddrdhygnkrldlagpllaflfrgmfknllkevriyaqkfidrgkdfnlelaiktriisdglkyslatgnwgdqkkahqaragvsqvlnrltfastlshlrrlnspigrdgklakprqlhntlwgmvcpaetpeghavglvknlalmayisvgsqpspilefleewsmenleeispaaiadatkifvngcwvgihkdpeqlmntlrklrrqmdiivsevsmirdirereiriytdagricrpllivekqklllkkrhidqlkereynnyswqdlvasgvveyidtleeetvmlamtpddlqekevaycstythceihpsmilgvcasiipfpdhnqsprntyqsamgkqamgvyitnfhvrmdtlahvlyypqkplvttrsmeylrfrelpaginsivaiasytgynqedsvimnrsavdrgffrsvfyrsykeqeskkgfdqeevfekptretcqgmrhaiydkldddgliapgvrvsgddviigktvtlptkrdcstflrtsetgivdqvmvtlnqegykfckirvrsvripqigdkfasrhgqkgtcgiqyrqedmpftcegitpdiiinphaipsrmtighlieclqgkvsankgeigdatpfndavnvqkisnllsdygyhlrgnevlyngftgrkitsqifigptyyqrlkhmvddkihsrargpiqilnrqpmegrsrdgglrfgemerdcqiahgaaqflrerlfeasdpyqvhvcnlcgimaiantrthtyecrgcrnktqislvrmpyackllfqelmsmsiaprmmsv/ddeeetyrlwkirktimqlchdrgylvtqdeldqtleefkaqfgdkpsegrprrtdltvlvahnddptdqmfvffpeepkvgiktikvycqrmqeenitralivvqqgmtpsakqslvdmapkyileqflqqellinitehelvpehvvmtkeevtellaryklrenqlpriqagdpvaryfgikrgqvvkiirpsetagryityrlvq >8wpe_AEG: title=STRUCTURE OF MONKEYPOX VIRUS POLYMERASE COMPLEX F8-A22-E4-H5 (TAG- FREE A22) WITH EXOGENOUS DNA organism=? DNA sequence DG(I14):DC(H35) DC(I15):DG(H34) DA(I16):DT(H33) DA(I17):DT(H32) DT(I18):DA(H31) DT(I19):DA(H30) DC(I20):DG(H29) DG(I21):DC(H28) DT(I22):DA(H27) DA(I23):DT(H26) DA(I24):DT(H25) DT(I25):DA(H24) DC(I26):DG(H23) DA(I27):DT(H22) DT(I28):DA(H21) DG(I29):DC(H20) DG(I30):DC(H19) DT(I31):DA(H18) DC(I32):DG(H17) DA(I33):DT(H16) DT(I34):DA(H15) DA(I35):DT(H14) DG(I36):DC(H13) DC(I37):DG(H12) DT(I38):DA(H11) DC(I39):DG(H10) DC(I40):DG(H9) DC(I41):DG(H8) DG(I42):DC(H7) DC(I43):DG(H6) DG(I44):DC(H5) chainA (668) TYR668 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (804) LYS804 0 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (832) ARG832 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE chainG ( 38) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 prot.sequence mdvrcinwfeshgenrflylksrcrngetvfirfphyfyyvvtdeiyqslspppfnarpmgkmrtididetisynldikdrkcsvadmwlieepkkrsiqnatmdeffniswfyisngispdgcysldeqyltkinngcyhcddprncfakeiprfdiprsylfldiechfdkkfpsvfinpishtsycyidlsgkrllftlineemlteqeiqeavdrgclriqslmemdyerelvlcseivllriakqlleltfdyvvtfnghnfdlryitnrlelltgekiifrspdkkeavhlciyernqsshkgvcgmanttfhvnnnngtiffdlysfiqksekldsykldsisknafscmgkvlnrgvremtfigddttdakgkadtfakvlttgnyvtvdediickvirkdilengfkvvlscptlpndiyklsfgkddidlaqmykdynlnialdmarycihdaclcqylweyygvetktdagaatyvlpqsmvfeyrastiikgpllkllletktilvrsetkqkfpyeggkvfapkqkmfsnnvlifdynslypnvcifgnlspetlvgvvvstnrleeeinnqlllqkypppryitvhceprlpnliseiaifdrsiegtiprllrtflaerarykkmlkqatsstekaiydsmqytykivansvYglmgfrnsalysyasaksctsigrrmilylesvlngaelsngmlrfantlsnpfymddrdinpivktslpidyrfrfrsvygdtdsvfteidsqdvdksieiakelerlinsrvlfnnfkiefeavyknlimqskKkyttmkysassnsksvperinkgtsetRrdvskfhknmiktyktrlsemlsegrmnsnqvcidilrsletdlrsefdsrssplelfmlsrmhhsnyksadnpnmylvteynknnpetielgeryyfayicpanvpwtkklvniktyetiidrsfklgsnqrifyevyfkrltseivnlldnkvlcisffqrmfgsrptfyea/sdlkvatdnivkdlkkiitrisavstvledvqaagisrqftsmtkaittlsdlvteg/sdlkvatdnivkdlkkiitrisavstvledvqaagisRqftsmtkaittlsdlvteg >8wpe_BCF: title=STRUCTURE OF MONKEYPOX VIRUS POLYMERASE COMPLEX F8-A22-E4-H5 (TAG- FREE A22) WITH EXOGENOUS DNA organism=? DNA sequence DG(I7) DA(I8) DA(I9) DT(I11) DA(I12) DA(I13) DG(I14) DC(I15) DA(I16) DA(I17) DT(I18) DT(I19) DC(I20) DG(I21) DT(I22) DA(I23) DA(I24) DT(I25) DC(I26) DA(I27) DT(I28) DG(I29) DG(I30) DT(I31) DC(I32) DA(I33) DT(I34) DA(I35) DG(I36) DC(I37) DT(I38) DC(I39) DC(I40) DC(I41) DG(I42) DC(I43) DG(I44) chainB chainC (161) THR161 0 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG185 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ASP186 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF prot.sequence mtssadltnlkellslykslrfsdsvaiekynslvewgtstywkigvqkvtnvetsisdyydevknkpfnidpgyyiflpvyfgsvfiyskgknmvelgsgnsfqipdeirsacnkvldsdngidflrfvllnnrwimedaiskyqspvnifklaseyglnipnyleieieedtlfddelysimersfddtfpkisisyiklgelkrqvvdffkfsfmyiesikvdrigdnifipsvitksgkkilvkdvdhlirskvrehtfvkvkkkntfsilydydgngtetrgevikriidtigrdyyvngkyfskvgiaglkqltnkldinecatvdelvdeinksgtvkrkiknqsvfdlsreclgypeadfitlvnnmrfkienckvvnfnientnclnnpsietiygnfnqfvsifntvtdvkkrlfe/mnsvtishapytityhddwepvmsqlvefynevaswllrdetspipdkffiqlkqplrnkrvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvipwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgkTdfsniraklespvttivgyhpaaRDhqfekdrsfeiinvlleldnktpinwaqgfiy/lsdlkvatdnivkdlkkiitrisavstvledvqaagisrqftsmtkaittlsdlvtegkskvvrk >8wpf_AEG: title=STRUCTURE OF MONKEYPOX VIRUS POLYMERASE COMPLEX F8-A22-E4-H5 WITH EXOGENOUS DNA BEARING ONE ABASIC SITE organism=? DNA sequence DG(I14):DC(H35) DC(I15):DG(H34) DA(I16):DT(H33) DA(I17):DT(H32) DT(I18):DA(H31) DT(I19):DA(H30) DC(I20):DG(H29) DG(I21):DC(H28) DT(I22):DA(H27) DA(I23):DT(H26) DA(I24):DT(H25) DT(I25):DA(H24) DC(I26):DG(H23) DA(I27):DT(H22) DT(I28):DA(H21) DG(I29):DC(H20) DG(I30):DC(H19) DT(I31):DA(H18) DC(I32):DG(H17) DA(I33):DT(H16) DT(I34):DA(H15) DA(I35):DT(H14) DG(I36):DC(H13) DC(I37):DG(H12) DT(I38):DA(H11) DC(I39):DG(H10) DC(I40):DG(H9) DC(I41):DG(H8) DG(I42):DC(H7) DC(I43):DG(H6) DG(I44):DC(H5) chainA (668) TYR668 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (804) LYS804 0 8 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (832) ARG832 0 0 0 5 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 38) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 10 0 0 0 0 0 0 0 0 0 chainG ( 38) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 0 0 0 prot.sequence mdvrcinwfeshgenrflylksrcrngetvfirfphyfyyvvtdeiyqslspppfnarpmgkmrtididetisynldikdrkcsvadmwlieepkkrsiqnatmdeffniswfyisngispdgcysldeqyltkinngcyhcddprncfakeiprfdiprsylfldiechfdkkfpsvfinpishtsycyidlsgkrllftlineemlteqeiqeavdrgclriqslmemdyerelvlcseivllriakqlleltfdyvvtfnghnfdlryitnrlelltgekiifrspdkkeavhlciyernqsshkgvcgmanttfhvnnnngtiffdlysfiqksekldsykldsisknafscmgkvlnrgvremtfigddttdakgkadtfakvlttgnyvtvdediickvirkdilengfkvvlscptlpndiyklsfgkddidlaqmykdynlnialdmarycihdaclcqylweyygvetktdagaatyvlpqsmvfeyrastiikgpllkllletktilvrsetkqkfpyeggkvfapkqkmfsnnvlifdynslypnvcifgnlspetlvgvvvstnrleeeinnqlllqkypppryitvhceprlpnliseiaifdrsiegtiprllrtflaerarykkmlkqatsstekaiydsmqytykivansvYglmgfrnsalysyasaksctsigrrmilylesvlngaelsngmlrfantlsnpfymddrdinpivktslpidyrfrfrsvygdtdsvfteidsqdvdksieiakelerlinsrvlfnnfkiefeavyknlimqskKkyttmkysassnsksvperinkgtsetRrdvskfhknmiktyktrlsemlsegrmnsnqvcidilrsletdlrsefdsrssplelfmlsrmhhsnyksadnpnmylvteynknnpetielgeryyfayicpanvpwtkklvniktyetiidrsfklgsnqrifyevyfkrltseivnlldnkvlcisffqrmfgsrptfyea/sdlkvatdnivkdlkkiitrisavstvledvqaagisRqftsmtkaittlsdlvteg/sdlkvatdnivkdlkkiitrisavstvledvqaagisRqftsmtkaittlsdlvteg >8wpf_BCF: title=STRUCTURE OF MONKEYPOX VIRUS POLYMERASE COMPLEX F8-A22-E4-H5 WITH EXOGENOUS DNA BEARING ONE ABASIC SITE organism=? DNA sequence DC(I4) DA(I5) DG(I7) DA(I8) DA(I9) DT(I10) DT(I11) DA(I12) DA(I13) DG(I14) DC(I15) DA(I16) DA(I17) DT(I18) DT(I19) DC(I20) DG(I21) DT(I22) DA(I23) DA(I24) DT(I25) DC(I26) DA(I27) DT(I28) DG(I29) DG(I30) DT(I31) DC(I32) DA(I33) DT(I34) DA(I35) DG(I36) DC(I37) DT(I38) DC(I39) DC(I40) DC(I41) DG(I42) DC(I43) DG(I44) chainB ( 2) HIS-9 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) HIS-8 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) HIS-6 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC ( 87) LYS87 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR161 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG185 0 32 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF prot.sequence mHHhHhhgtgsmtssadltnlkellslykslrfsdsvaiekynslvewgtstywkigvqkvtnvetsisdyydevknkpfnidpgyyiflpvyfgsvfiyskgknmvelgsgnsfqipdeirsacnkvldsdngidflrfvllnnrwimedaiskyqspvnifklaseyglnipnyleieieedtlfddelysimersfddtfpkisisyiklgelkrqvvdffkfsfmyiesikvdrigdnifipsvitksgkkilvkdvdhlirskvrehtfvkvkkkntfsilydydgngtetrgevikriidtigrdyyvngkyfskvgiaglkqltnkldinecatvdelvdeinksgtvkrkiknqsvfdlsreclgypeadfitlvnnmrfkienckvvnfnientnclnnpsietiygnfnqfvsifntvtdvkkrlf/mnsvtishapytityhddwepvmsqlvefynevaswllrdetspipdkffiqlkqplrnkrvcvcgidpypkdgtgvpfespnftkKsikeiassisrltgvidykgynlniidgvipwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgkTdfsniraklespvttivgyhpaaRdhqfekdrsfeiinvlleldnktpinwaqgfiy/lsdlkvatdnivkdlkkiitrisavstvledvqaagisrqftsmtkaittlsdlvtegkskvvrk >8wpf_C:Uracil-DNA_glycosylase-like; title=STRUCTURE OF MONKEYPOX VIRUS POLYMERASE COMPLEX F8-A22-E4-H5 WITH EXOGENOUS DNA BEARING ONE ABASIC SITE organism=? DNA sequence DC(I4) DA(I5) DG(I7) DA(I8) DA(I9) DT(I10) DT(I11) DA(I12) DA(I13) DG(I14) DC(I15) DA(I16) DA(I17) DT(I18) DT(I19) DC(I20) DG(I21) DT(I22) DA(I23) DA(I24) DT(I25) DC(I26) DA(I27) DT(I28) DG(I29) DG(I30) DT(I31) DC(I32) DA(I33) DT(I34) DA(I35) DG(I36) DC(I37) DT(I38) DC(I39) DC(I40) DC(I41) DG(I42) DC(I43) DG(I44) chainC ( 87) LYS87 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (161) THR161 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG185 0 32 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mnsvtishapytityhddwepvmsqlvefynevaswllrdetspipdkffiqlkqplrnkrvcvcgidpypkdgtgvpfespnftkKsikeiassisrltgvidykgynlniidgvipwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgkTdfsniraklespvttivgyhpaaRdhqfekdrsfeiinvlleldnktpinwaqgfiy >8wpk_A:DNA/RNA_polymerases;Ribonuclease_H-like; title=STRUCTURE OF MONKEYPOX VIRUS POLYMERASE COMPLEX F8-A22-E4-H5 WITH EXGENOUS DNA organism=? DNA sequence DC(H5):DG(I44) DG(H6):DC(I43) DC(H7):DG(I42) DG(H8):DC(I41) DG(H9):DC(I40) DG(H10):DC(I39) DA(H11):DT(I38) DG(H12):DC(I37) DC(H13):DG(I36) DT(H14):DA(I35) DA(H15):DT(I34) DT(H16):DA(I33) DG(H17):DC(I32) DA(H18):DT(I31) DC(H19):DG(I30) DC(H20):DG(I29) DA(H21):DT(I28) DT(H22):DA(I27) DG(H23):DC(I26) DA(H24):DT(I25) DT(H25):DA(I24) DT(H26):DA(I23) DA(H27):DT(I22) DC(H28):DG(I21) DG(H29):DC(I20) DA(H30):DT(I19) DA(H31):DT(I18) DT(H32):DA(I17) DT(H33):DA(I16) DG(H34):DC(I15) DC(H35):DG(I14) chainA (340) LYS340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (668) TYR668 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (804) LYS804 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 (832) ARG832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 prot.sequence mdvrcinwfeshgenrflylksrcrngetvfirfphyfyyvvtdeiyqslspppfnarpmgkmrtididetisynldikdrkcsvadmwlieepkkrsiqnatmdeffniswfyisngispdgcysldeqyltkinngcyhcddprncfakeiprfdiprsylfldiechfdkkfpsvfinpishtsycyidlsgkrllftlineemlteqeiqeavdrgclriqslmemdyerelvlcseivllriakqlleltfdyvvtfnghnfdlryitnrlelltgekiifrspdkkeavhlciyernqsshkgvcgmanttfhvnnnngtiffdlysfiqkseKldsykldsisknafscmgkvlnrgvremtfigddttdakgkadtfakvlttgnyvtvdediickvirkdilengfkvvlscptlpndiyklsfgkddidlaqmykdynlnialdmarycihdaclcqylweyygvetktdagaatyvlpqsmvfeyrastiikgpllkllletktilvrsetkqkfpyeggkvfapkqkmfsnnvlifdynslypnvcifgnlspetlvgvvvstnrleeeinnqlllqkypppryitvhceprlpnliseiaifdrsiegtiprllrtflaerarykkmlkqatsstekaiydsmqytykivansvYglmgfrnsalysyasaksctsigrrmilylesvlngaelsngmlrfantlsnpfymddrdinpivktslpidyrfrfrsvygdtdsvfteidsqdvdksieiakelerlinsrvlfnnfkiefeavyknlimqskKkyttmkysassnsksvperinkgtsetRrdvskfhknmiktyktrlsemlsegrmnsnqvcidilrsletdlrsefdsrssplelfmlsrmhhsnyksadnpnmylvteynknnpetielgeryyfayicpanvpwtkklvniktyetiidrsfklgsnqrifyevyfkrltseivnlldnkvlcisffqrmfgsrptfyea >8wpk_AEG: title=STRUCTURE OF MONKEYPOX VIRUS POLYMERASE COMPLEX F8-A22-E4-H5 WITH EXGENOUS DNA organism=? DNA sequence DC(H5):DG(I44) DG(H6):DC(I43) DC(H7):DG(I42) DG(H8):DC(I41) DG(H9):DC(I40) DG(H10):DC(I39) DA(H11):DT(I38) DG(H12):DC(I37) DC(H13):DG(I36) DT(H14):DA(I35) DA(H15):DT(I34) DT(H16):DA(I33) DG(H17):DC(I32) DA(H18):DT(I31) DC(H19):DG(I30) DC(H20):DG(I29) DA(H21):DT(I28) DT(H22):DA(I27) DG(H23):DC(I26) DA(H24):DT(I25) DT(H25):DA(I24) DT(H26):DA(I23) DA(H27):DT(I22) DC(H28):DG(I21) DG(H29):DC(I20) DA(H30):DT(I19) DA(H31):DT(I18) DT(H32):DA(I17) DT(H33):DA(I16) DG(H34):DC(I15) DC(H35):DG(I14) chainA (340) LYS340 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 (668) TYR668 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 (804) LYS804 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 12 0 (832) ARG832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 4 0 0 0 chainE chainG ( 38) ARG177 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence mdvrcinwfeshgenrflylksrcrngetvfirfphyfyyvvtdeiyqslspppfnarpmgkmrtididetisynldikdrkcsvadmwlieepkkrsiqnatmdeffniswfyisngispdgcysldeqyltkinngcyhcddprncfakeiprfdiprsylfldiechfdkkfpsvfinpishtsycyidlsgkrllftlineemlteqeiqeavdrgclriqslmemdyerelvlcseivllriakqlleltfdyvvtfnghnfdlryitnrlelltgekiifrspdkkeavhlciyernqsshkgvcgmanttfhvnnnngtiffdlysfiqkseKldsykldsisknafscmgkvlnrgvremtfigddttdakgkadtfakvlttgnyvtvdediickvirkdilengfkvvlscptlpndiyklsfgkddidlaqmykdynlnialdmarycihdaclcqylweyygvetktdagaatyvlpqsmvfeyrastiikgpllkllletktilvrsetkqkfpyeggkvfapkqkmfsnnvlifdynslypnvcifgnlspetlvgvvvstnrleeeinnqlllqkypppryitvhceprlpnliseiaifdrsiegtiprllrtflaerarykkmlkqatsstekaiydsmqytykivansvYglmgfrnsalysyasaksctsigrrmilylesvlngaelsngmlrfantlsnpfymddrdinpivktslpidyrfrfrsvygdtdsvfteidsqdvdksieiakelerlinsrvlfnnfkiefeavyknlimqskKkyttmkysassnsksvperinkgtsetRrdvskfhknmiktyktrlsemlsegrmnsnqvcidilrsletdlrsefdsrssplelfmlsrmhhsnyksadnpnmylvteynknnpetielgeryyfayicpanvpwtkklvniktyetiidrsfklgsnqrifyevyfkrltseivnlldnkvlcisffqrmfgsrptfyea/sdlkvatdnivkdlkkiitrisavstvledvqaagisrqftsmtkaittlsdlvteg/sdlkvatdnivkdlkkiitrisavstvledvqaagisRqftsmtkaittlsdlvteg >8wpk_BCF: title=STRUCTURE OF MONKEYPOX VIRUS POLYMERASE COMPLEX F8-A22-E4-H5 WITH EXGENOUS DNA organism=? DNA sequence DG(I7) DA(I8) DA(I9) DT(I10) DT(I11) DA(I12) DA(I13) DG(I14) DC(I15) DA(I16) DA(I17) DT(I18) DT(I19) DC(I20) DG(I21) DT(I22) DA(I23) DA(I24) DT(I25) DC(I26) DA(I27) DT(I28) DG(I29) DG(I30) DT(I31) DC(I32) DA(I33) DT(I34) DA(I35) DG(I36) DC(I37) DT(I38) DC(I39) DC(I40) DC(I41) DG(I42) DC(I43) DG(I44) chainB ( 5) HIS-6 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 7) HIS-4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (161) THR161 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG185 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF prot.sequence mhhhHhHgtgsmtssadltnlkellslykslrfsdsvaiekynslvewgtstywkigvqkvtnvetsisdyydevknkpfnidpgyyiflpvyfgsvfiyskgknmvelgsgnsfqipdeirsacnkvldsdngidflrfvllnnrwimedaiskyqspvnifklaseyglnipnyleieieedtlfddelysimersfddtfpkisisyiklgelkrqvvdffkfsfmyiesikvdrigdnifipsvitksgkkilvkdvdhlirskvrehtfvkvkkkntfsilydydgngtetrgevikriidtigrdyyvngkyfskvgiaglkqltnkldinecatvdelvdeinksgtvkrkiknqsvfdlsreclgypeadfitlvnnmrfkienckvvnfnientnclnnpsietiygnfnqfvsifntvtdvkkrlfe/mnsvtishapytityhddwepvmsqlvefynevaswllrdetspipdkffiqlkqplrnkrvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvipwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgkTdfsniraklespvttivgyhpaaRdhqfekdrsfeiinvlleldnktpinwaqgfiy/lsdlkvatdnivkdlkkiitrisavstvledvqaagisrqftsmtkaittlsdlvtegkskvvrk >8wpp_AEG: title=STRUCTURE OF MONKEYPOX VIRUS POLYMERASE COMPLEX F8-A22-E4-H5 WITH ENDOGENOUS DNA organism=? DNA sequence DG(I14):DC(H35) DC(I15):DG(H34) DA(I16):DT(H33) DA(I17):DT(H32) DT(I18):DA(H31) DT(I19):DA(H30) DC(I20):DG(H29) DG(I21):DC(H28) DT(I22):DA(H27) DA(I23):DT(H26) DA(I24):DT(H25) DT(I25):DA(H24) DC(I26):DG(H23) DA(I27):DT(H22) DT(I28):DA(H21) DG(I29):DC(H20) DG(I30):DC(H19) DT(I31):DA(H18) DC(I32):DG(H17) DA(I33):DT(H16) DT(I34):DA(H15) DA(I35):DT(H14) DG(I36):DC(H13) DC(I37):DG(H12) DT(I38):DA(H11) DC(I39):DG(H10) DC(I40):DG(H9) DC(I41):DG(H8) DG(I42):DC(H7) DC(I43):DG(H6) DG(I44):DC(H5) chainA (668) TYR668 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (752) THR752 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (804) LYS804 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (805) LYS805 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (832) ARG832 0 0 0 5 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (834) ASP834 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (948) LYS948 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainE ( 38) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 10 4 0 0 0 0 0 0 0 0 chainG ( 38) ARG177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 prot.sequence mdvrcinwfeshgenrflylksrcrngetvfirfphyfyyvvtdeiyqslspppfnarpmgkmrtididetisynldikdrkcsvadmwlieepkkrsiqnatmdeffniswfyisngispdgcysldeqyltkinngcyhcddprncfakeiprfdiprsylfldiechfdkkfpsvfinpishtsycyidlsgkrllftlineemlteqeiqeavdrgclriqslmemdyerelvlcseivllriakqlleltfdyvvtfnghnfdlryitnrlelltgekiifrspdkkeavhlciyernqsshkgvcgmanttfhvnnnngtiffdlysfiqksekldsykldsisknafscmgkvlnrgvremtfigddttdakgkadtfakvlttgnyvtvdediickvirkdilengfkvvlscptlpndiyklsfgkddidlaqmykdynlnialdmarycihdaclcqylweyygvetktdagaatyvlpqsmvfeyrastiikgpllkllletktilvrsetkqkfpyeggkvfapkqkmfsnnvlifdynslypnvcifgnlspetlvgvvvstnrleeeinnqlllqkypppryitvhceprlpnliseiaifdrsiegtiprllrtflaerarykkmlkqatsstekaiydsmqytykivansvYglmgfrnsalysyasaksctsigrrmilylesvlngaelsngmlrfantlsnpfymddrdinpivktslpidyrfrfrsvygdTdsvfteidsqdvdksieiakelerlinsrvlfnnfkiefeavyknlimqskKKyttmkysassnsksvperinkgtsetRrDvskfhknmiktyktrlsemlsegrmnsnqvcidilrsletdlrsefdsrssplelfmlsrmhhsnyksadnpnmylvteynknnpetielgeryyfayicpanvpwtkklvniKtyetiidrsfklgsnqrifyevyfkrltseivnlldnkvlcisffqrmfgsrptfyea/sdlkvatdnivkdlkkiitrisavstvledvqaagisRqftsmtkaittlsdlvteg/sdlkvatdnivkdlkkiitrisavstvledvqaagisRqftsmtkaittlsdlvteg >8wpp_BCF: title=STRUCTURE OF MONKEYPOX VIRUS POLYMERASE COMPLEX F8-A22-E4-H5 WITH ENDOGENOUS DNA organism=? DNA sequence DG(I7) DA(I8) DA(I9) DT(I10) DT(I11) DA(I12) DA(I13) DG(I14) DC(I15) DA(I16) DA(I17) DT(I18) DT(I19) DC(I20) DG(I21) DT(I22) DA(I23) DA(I24) DT(I25) DC(I26) DA(I27) DT(I28) DG(I29) DG(I30) DT(I31) DC(I32) DA(I33) DT(I34) DA(I35) DG(I36) DC(I37) DT(I38) DC(I39) DC(I40) DC(I41) DG(I42) DC(I43) DG(I44) chainB ( 2) HIS-9 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 3) HIS-8 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ( 5) HIS-6 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainC (161) THR161 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (185) ARG185 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (186) ASP186 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 (188) GLN188 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 chainF prot.sequence mHHhHhhgtgsmtssadltnlkellslykslrfsdsvaiekynslvewgtstywkigvqkvtnvetsisdyydevknkpfnidpgyyiflpvyfgsvfiyskgknmvelgsgnsfqipdeirsacnkvldsdngidflrfvllnnrwimedaiskyqspvnifklaseyglnipnyleieieedtlfddelysimersfddtfpkisisyiklgelkrqvvdffkfsfmyiesikvdrigdnifipsvitksgkkilvkdvdhlirskvrehtfvkvkkkntfsilydydgngtetrgevikriidtigrdyyvngkyfskvgiaglkqltnkldinecatvdelvdeinksgtvkrkiknqsvfdlsreclgypeadfitlvnnmrfkienckvvnfnientnclnnpsietiygnfnqfvsifntvtdvkkrlfe/mnsvtishapytityhddwepvmsqlvefynevaswllrdetspipdkffiqlkqplrnkrvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvipwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgkTdfsniraklespvttivgyhpaaRDhQfekdrsfeiinvlleldnktpinwaqgfiy/lsdlkvatdnivkdlkkiitrisavstvledvqaagisrqftsmtkaittlsdlvtegkskvvrk >8wpp_E: title=STRUCTURE OF MONKEYPOX VIRUS POLYMERASE COMPLEX F8-A22-E4-H5 WITH ENDOGENOUS DNA organism=? DNA sequence DC(H5):DG(I44) DG(H6):DC(I43) DC(H7):DG(I42) DG(H8):DC(I41) DG(H9):DC(I40) DG(H10):DC(I39) DA(H11):DT(I38) DG(H12):DC(I37) DC(H13):DG(I36) DT(H14):DA(I35) DA(H15):DT(I34) DT(H16):DA(I33) DG(H17):DC(I32) DA(H18):DT(I31) DC(H19):DG(I30) DC(H20):DG(I29) DA(H21):DT(I28) DT(H22):DA(I27) DG(H23):DC(I26) DA(H24):DT(I25) DT(H25):DA(I24) DT(H26):DA(I23) DA(H27):DT(I22) DC(H28):DG(I21) DG(H29):DC(I20) DA(H30):DT(I19) DA(H31):DT(I18) DT(H32):DA(I17) DT(H33):DA(I16) DG(H34):DC(I15) DC(H35):DG(I14) chainE ( 38) ARG177 0 0 0 0 0 0 0 0 4 10 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 prot.sequence sdlkvatdnivkdlkkiitrisavstvledvqaagisRqftsmtkaittlsdlvteg >9ant_B:Homeodomain-like; title=ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX organism=Drosophila melanogaster DNA sequence DG(E401):DC(F528) DA(E402):DT(F527) DA(E403):DT(F526) DA(E404):DT(F525) DG(E405):DC(F524) DC(E406):DG(F523) DC(E407):DG(F522) DA(E408):DT(F521) DT(E409):DA(F520) DT(E410):DA(F519) DA(E411):DT(F518) DG(E412):DC(F517) DA(E413):DT(F516) DG(E414):DC(F515) chainB ( 1) ARG5 0 0 0 0 0 0 0 0 0 9 12 10 0 0 ( 42) LYS46 0 0 0 2 2 0 0 0 0 0 0 0 0 0 ( 43) ILE47 0 0 0 0 0 0 0 3 2 0 0 0 0 0 ( 46) GLN50 0 0 0 0 2 7 2 0 0 0 0 0 0 0 ( 47) ASN51 0 0 0 0 0 0 0 1 13 4 0 0 0 0 ( 50) MET54 0 0 0 0 0 0 2 0 0 0 0 0 0 0 prot.sequence RqtytryqtlelekefhfnryltrrrrieiahalslterqiKIwfQNrrMkwkken >9ica_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'- O-(1-THIOTRIPHOSPHATE), SOAKED IN THE PRESENCE OF DATP(ALPHA)S AND MNCL2 organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icb_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'- TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND COCL2 organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icc_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'- TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND CRCL3 organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 0 1 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9ice_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND CUCL2 (0.1 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 0 1 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icf_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'- TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND ZNCL2 organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 0 1 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icg_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND ZNCL2 (1 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 1 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9ich_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND ZNCL2 (1 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9ici_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND ZNCL2 (1 MILLIMOLAR) organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 1 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icj_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9ick_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF ARTIFICIAL MOTHER LIQUOR organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 3 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icl_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF PYROPHOSPHATE AND MNCL2 organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 3 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icm_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DOUBLE STRANDED DNA (NO 5'-PHOSPHATE) organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 5 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icn_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2',3'-DIDEOXYCYTIDINE- 5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DDCTP AND MGCL2 organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 3 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9ico_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF DTTP AND MGCL2 organism=Homo sapiens DNA sequence DC(T2):DG(P6) DA(T3):DT(P5) DT(T4):DA(P4) DC(T5):DG(P3) DT(T6):DA(P2) DG(T7):DC(P1) chainA (226) LYS234 4 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icp_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF PYROPHOSPHATE (1 MILLIMOLAR) AND MGCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(T2):DG(P6) DA(T3):DT(P5) DT(T4):DA(P4) DC(T5):DG(P3) DT(T6):DA(P2) DG(T7):DC(P1) chainA (226) LYS234 5 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icq_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 4 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icr_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYCYTIDINE-5'- TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DCTP AND MNCL2 organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 3 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9ics_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2',3'-DIDEOXYCYTIDINE- 5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DDCTP AND MNCL2 organism=Homo sapiens DNA sequence DC(T2):DG(P6) DA(T3):DT(P5) DT(T4):DA(P4) DC(T5):DG(P3) DT(T6):DA(P2) DG(T7):DC(P1) chainA (226) LYS234 2 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9ict_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYGUANOSINE-5'- TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DGTP AND MNCL2 organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 4 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icu_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 4 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icv_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'- TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND ZNCL2 organism=Homo sapiens DNA sequence DT(P1):DA(T7) DC(P2):DG(T6) DT(P3):DA(T5) DA(P4):DT(T4) DA(P5):DT(T3) DT(P6):DA(T2) DG(P7):DC(T1) chainA (226) LYS234 0 0 0 0 1 1 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icw_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; NATIVE STRUCTURE organism=Homo sapiens DNA sequence DC(T2):DG(P6) DA(T3):DT(P5) DT(T4):DA(P4) DC(T5):DG(P3) DT(T6):DA(P2) DG(T7):DC(P1) chainA (226) LYS234 3 0 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icx_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA (NON GAPPED DNA ONLY) organism=Homo sapiens DNA sequence DC(P1):DG(T7) DA(P2):DT(T6) DG(P3):DC(T5) DA(P4):DT(T4) DT(P5):DA(T3) DG(P6):DC(T2) chainA (226) LYS234 0 0 0 0 0 1 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9icy_A:Nucleotidyltransferase;DNA_polymerase_beta,_N-terminal_domain-like;PsbU/PolX_domain-like; title=DNA POLYMERASE BETA (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA (NON GAPPED DNA ONLY) organism=Homo sapiens DNA sequence DC(T1):DG(P7) DA(T2):DT(P6) DT(T3):DA(P5) DT(T4):DA(P4) DA(T5):DT(P3) DG(T6):DC(P2) DA(T7):DT(P1) chainA (226) LYS234 0 1 1 0 0 0 0 prot.sequence etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse >9mht_A:S-adenosyl-L-methionine-dependent_methyltransferases; title=CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/DNA COMPLEX organism=Haemophilus haemolyticus DNA sequence DG(D422):DC(C413) DT(D423):DA(C412) DC(D424):DG(C411) DA(D425):DT(C410) DG(D426):DC(C409) 3DR(D427):DG(C408) DG(D428):DC(C407) DC(D429):DG(C406) DA(D430):DT(C405) DT(D431):DA(C404) DG(D432):DC(C403) DG(D433):DC(C402) chainA ( 86) ILE86 0 0 0 2 4 0 0 0 0 0 0 0 ( 87) SER87 0 0 0 0 12 0 4 0 0 0 0 0 (237) GLN237 0 0 0 0 56 11 22 0 0 0 0 0 (240) ARG240 0 0 0 7 20 1 0 0 0 0 0 0 (260) ALA260 0 0 0 0 0 0 0 0 1 0 0 0 (261) LYS261 0 0 0 0 0 0 0 0 1 0 0 0 prot.sequence mieikdkqltglrfidlfaglggfrlalescgaecvysnewdkyaqevyemnfgekpegditqvnektipdhdilcagfpcqafsISgkqkgfedsrgtlffdiarivrekkpkvvfmenvknfashdngntlevvkntmneldysfhakvlnaldygipqkreriymicfrndlniqnfqfpkpfelntfvkdlllpdsevehlvidrkdlvmtnqeieqttpktvrlgivgkggQgeRiystrgiaitlsaygggifAKtggylvngktrklhprecarvmgypdsykvhpstsqaykqfgnsvvinvlqyiaynigsslnfkpy